#                                                                           --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
# target name        accession  query name                       accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target
#------------------- ----------             -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------
Cdc6_C	PF09079.11	gi|289595679|ref|YP_003482375.1|	-	7.4e-22	77.1	0.4	8e-21	73.8	0.0	2.6	3	0	0	3	3	3	1	CDC6,	C	terminal	winged	helix	domain
AAA	PF00004.29	gi|289595679|ref|YP_003482375.1|	-	4e-11	43.4	0.1	2.6e-10	40.8	0.0	2.3	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.6	gi|289595679|ref|YP_003482375.1|	-	1e-10	42.3	0.4	1.7e-09	38.3	0.4	2.4	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.6	gi|289595679|ref|YP_003482375.1|	-	4.5e-09	36.7	0.0	1.1e-08	35.4	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
ATPase_2	PF01637.18	gi|289595679|ref|YP_003482375.1|	-	2.2e-06	27.7	0.7	5.8e-06	26.4	0.7	1.7	1	1	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
TniB	PF05621.11	gi|289595679|ref|YP_003482375.1|	-	1.5e-05	24.5	0.0	3.5e-05	23.3	0.0	1.6	1	1	0	1	1	1	1	Bacterial	TniB	protein
Sigma54_activat	PF00158.26	gi|289595679|ref|YP_003482375.1|	-	0.00012	21.8	0.7	0.0011	18.7	0.0	2.5	3	0	0	3	3	3	1	Sigma-54	interaction	domain
DUF815	PF05673.13	gi|289595679|ref|YP_003482375.1|	-	0.00056	19.2	0.0	0.00091	18.5	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
NACHT	PF05729.12	gi|289595679|ref|YP_003482375.1|	-	0.0017	18.3	0.0	0.0043	17.0	0.0	1.7	1	0	0	1	1	1	1	NACHT	domain
DEAD	PF00270.29	gi|289595679|ref|YP_003482375.1|	-	0.004	16.9	0.1	2.5	7.8	0.0	2.3	2	0	0	2	2	2	2	DEAD/DEAH	box	helicase
AAA_7	PF12775.7	gi|289595679|ref|YP_003482375.1|	-	0.0062	16.1	0.0	0.012	15.1	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	dynein	motor	region
FtsK_SpoIIIE	PF01580.18	gi|289595679|ref|YP_003482375.1|	-	0.012	15.0	0.1	0.21	10.9	0.0	2.2	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
AAA_24	PF13479.6	gi|289595679|ref|YP_003482375.1|	-	0.012	15.3	1.6	0.067	12.9	1.6	2.1	1	1	0	1	1	1	0	AAA	domain
TsaE	PF02367.17	gi|289595679|ref|YP_003482375.1|	-	0.013	15.5	0.0	0.026	14.5	0.0	1.5	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_18	PF13238.6	gi|289595679|ref|YP_003482375.1|	-	0.017	15.7	0.0	0.05	14.1	0.0	1.9	1	0	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.12	gi|289595679|ref|YP_003482375.1|	-	0.042	13.1	0.0	0.07	12.4	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
AAA_19	PF13245.6	gi|289595679|ref|YP_003482375.1|	-	0.048	14.0	0.1	0.13	12.6	0.1	1.7	1	0	0	1	1	1	0	AAA	domain
AAA_2	PF07724.14	gi|289595679|ref|YP_003482375.1|	-	0.051	13.7	0.1	0.29	11.2	0.1	2.1	1	1	0	1	1	1	0	AAA	domain	(Cdc48	subfamily)
AAA_lid_10	PF17872.1	gi|289595679|ref|YP_003482375.1|	-	0.065	13.4	0.4	0.14	12.3	0.4	1.5	1	0	0	1	1	1	0	AAA	lid	domain
AAA_5	PF07728.14	gi|289595679|ref|YP_003482375.1|	-	0.074	13.1	0.3	0.8	9.7	0.0	2.4	2	1	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
PduV-EutP	PF10662.9	gi|289595679|ref|YP_003482375.1|	-	0.074	12.8	0.0	0.18	11.5	0.0	1.6	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_assoc_2	PF16193.5	gi|289595679|ref|YP_003482375.1|	-	0.08	13.3	0.3	0.23	11.8	0.3	1.8	1	0	0	1	1	1	0	AAA	C-terminal	domain
DLIC	PF05783.11	gi|289595679|ref|YP_003482375.1|	-	0.089	11.6	0.1	0.15	10.8	0.1	1.3	1	0	0	1	1	1	0	Dynein	light	intermediate	chain	(DLIC)
P-II	PF00543.22	gi|289595679|ref|YP_003482375.1|	-	0.09	13.4	0.1	4.6	7.9	0.0	3.0	3	0	0	3	3	3	0	Nitrogen	regulatory	protein	P-II
RNA_helicase	PF00910.22	gi|289595679|ref|YP_003482375.1|	-	0.13	12.7	0.0	0.3	11.5	0.0	1.7	1	0	0	1	1	1	0	RNA	helicase
Bac_DnaA	PF00308.18	gi|289595679|ref|YP_003482375.1|	-	0.15	11.9	1.7	1.2	9.0	0.0	2.2	2	0	0	2	2	2	0	Bacterial	dnaA	protein
Peptidase_S24	PF00717.23	gi|289595680|ref|YP_003482376.1|	-	0.023	14.7	0.0	0.063	13.2	0.0	1.8	1	1	0	1	1	1	0	Peptidase	S24-like
Sigma_reg_N	PF13800.6	gi|289595680|ref|YP_003482376.1|	-	0.089	13.1	0.3	2.6	8.4	0.2	2.3	2	0	0	2	2	2	0	Sigma	factor	regulator	N-terminal
eIF-5a	PF01287.20	gi|289595681|ref|YP_003482377.1|	-	2.7e-10	40.2	0.1	4.8e-10	39.4	0.1	1.4	1	0	0	1	1	1	1	Eukaryotic	elongation	factor	5A	hypusine,	DNA-binding	OB	fold
EFP	PF01132.20	gi|289595681|ref|YP_003482377.1|	-	0.0025	17.8	0.0	0.0042	17.1	0.0	1.4	1	0	0	1	1	1	1	Elongation	factor	P	(EF-P)	OB	domain
EFP_N	PF08207.12	gi|289595681|ref|YP_003482377.1|	-	0.003	17.6	0.0	0.005	16.8	0.0	1.4	1	0	0	1	1	1	1	Elongation	factor	P	(EF-P)	KOW-like	domain
Arginase	PF00491.21	gi|289595682|ref|YP_003482378.1|	-	9.1e-76	255.0	0.0	1.1e-75	254.7	0.0	1.0	1	0	0	1	1	1	1	Arginase	family
DUF87	PF01935.17	gi|289595682|ref|YP_003482378.1|	-	0.027	14.6	0.0	0.049	13.7	0.0	1.4	1	0	0	1	1	1	0	Helicase	HerA,	central	domain
GDP_Man_Dehyd	PF16363.5	gi|289595682|ref|YP_003482378.1|	-	0.033	13.6	0.0	0.044	13.2	0.0	1.3	1	1	0	1	1	1	0	GDP-mannose	4,6	dehydratase
DUF1743	PF08489.11	gi|289595682|ref|YP_003482378.1|	-	0.14	12.3	0.0	0.31	11.1	0.0	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1743)
T2SSE	PF00437.20	gi|289595684|ref|YP_003482380.1|	-	1.6e-42	145.4	0.0	2.8e-42	144.7	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
ABC_tran	PF00005.27	gi|289595684|ref|YP_003482380.1|	-	0.036	14.6	0.0	0.11	13.0	0.0	1.9	1	0	0	1	1	1	0	ABC	transporter
T2SSF	PF00482.23	gi|289595685|ref|YP_003482381.1|	-	4.7e-14	52.4	0.1	4.7e-14	52.4	0.1	4.0	3	1	1	4	4	4	1	Type	II	secretion	system	(T2SS),	protein	F
DUF4064	PF13273.6	gi|289595685|ref|YP_003482381.1|	-	0.018	15.3	2.8	0.018	15.3	2.8	2.8	2	2	0	2	2	2	0	Protein	of	unknown	function	(DUF4064)
ABC_export	PF16962.5	gi|289595685|ref|YP_003482381.1|	-	0.1	11.0	23.3	0.041	12.3	7.6	2.2	2	0	0	2	2	2	0	Putative	ABC	exporter
DUF4199	PF13858.6	gi|289595685|ref|YP_003482381.1|	-	0.36	11.2	16.4	0.96	9.8	6.3	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4199)
Wzy_C	PF04932.15	gi|289595685|ref|YP_003482381.1|	-	0.61	9.7	13.2	0.059	13.0	0.5	2.2	2	0	0	2	2	2	0	O-Antigen	ligase
YrvL	PF14184.6	gi|289595685|ref|YP_003482381.1|	-	1.5	8.9	22.2	2.3	8.3	6.9	2.3	2	0	0	2	2	2	0	Regulatory	protein	YrvL
Tetraspanin	PF00335.20	gi|289595685|ref|YP_003482381.1|	-	1.8	8.2	9.8	5.8	6.5	1.5	2.2	2	0	0	2	2	2	0	Tetraspanin	family
DUF2207	PF09972.9	gi|289595685|ref|YP_003482381.1|	-	2.1	7.0	19.8	2.6	6.7	4.9	2.1	1	1	0	2	2	2	0	Predicted	membrane	protein	(DUF2207)
DUF1129	PF06570.11	gi|289595685|ref|YP_003482381.1|	-	2.3	7.7	11.8	0.6	9.6	1.3	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1129)
DUF805	PF05656.14	gi|289595685|ref|YP_003482381.1|	-	7.7	7.0	11.2	0.75	10.2	0.8	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF805)
T2SSF	PF00482.23	gi|289595686|ref|YP_003482382.1|	-	7e-17	61.6	0.3	7e-17	61.6	0.3	2.4	3	0	0	3	3	3	1	Type	II	secretion	system	(T2SS),	protein	F
Trep_Strep	PF09605.10	gi|289595686|ref|YP_003482382.1|	-	0.017	15.1	3.1	0.017	15.1	3.1	2.9	2	1	1	3	3	3	0	Hypothetical	bacterial	integral	membrane	protein	(Trep_Strep)
Spectrin_like	PF18373.1	gi|289595686|ref|YP_003482382.1|	-	0.084	12.9	0.0	0.16	12.0	0.0	1.4	1	0	0	1	1	1	0	Spectrin	like	domain
T2SSE	PF00437.20	gi|289595687|ref|YP_003482383.1|	-	1.5e-46	158.7	0.0	2.6e-46	157.9	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
FtsK_SpoIIIE	PF01580.18	gi|289595687|ref|YP_003482383.1|	-	0.0061	16.0	0.1	0.018	14.4	0.0	1.8	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
AAA_15	PF13175.6	gi|289595687|ref|YP_003482383.1|	-	0.0086	15.8	1.3	0.55	9.9	0.0	2.2	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.6	gi|289595687|ref|YP_003482383.1|	-	0.02	15.4	2.8	0.41	11.1	0.1	2.5	2	0	0	2	2	2	0	AAA	domain
3H	PF02829.14	gi|289595687|ref|YP_003482383.1|	-	0.076	13.3	1.2	0.5	10.7	0.1	2.7	3	0	0	3	3	3	0	3H	domain
Xin	PF08043.12	gi|289595687|ref|YP_003482383.1|	-	0.17	11.6	0.0	0.35	10.6	0.0	1.6	1	0	0	1	1	1	0	Xin	repeat
zf-ribbon_3	PF13248.6	gi|289595688|ref|YP_003482384.1|	-	4.4e-15	54.5	22.0	2.8e-05	23.4	2.5	3.3	3	0	0	3	3	3	3	zinc-ribbon	domain
zinc_ribbon_2	PF13240.6	gi|289595688|ref|YP_003482384.1|	-	4.3e-13	48.5	22.1	9.1e-05	22.0	1.4	3.4	3	0	0	3	3	3	3	zinc-ribbon	domain
DZR	PF12773.7	gi|289595688|ref|YP_003482384.1|	-	3.6e-12	46.1	17.4	6.3e-08	32.5	9.4	2.3	2	0	0	2	2	2	2	Double	zinc	ribbon
CARDB	PF07705.11	gi|289595688|ref|YP_003482384.1|	-	6.2e-12	45.7	23.0	2.8e-05	24.3	0.4	5.9	5	0	0	5	5	5	3	CARDB
UPF0547	PF10571.9	gi|289595688|ref|YP_003482384.1|	-	2.6e-07	30.6	24.0	0.00077	19.5	2.6	3.5	3	0	0	3	3	3	2	Uncharacterised	protein	family	UPF0547
zinc_ribbon_15	PF17032.5	gi|289595688|ref|YP_003482384.1|	-	6.7e-05	23.6	13.9	0.0005	20.8	8.0	3.3	2	1	1	3	3	3	2	zinc-ribbon	family
MG4	PF17789.1	gi|289595688|ref|YP_003482384.1|	-	0.004	17.3	0.3	0.019	15.1	0.3	2.2	1	0	0	1	1	1	1	Macroglobulin	domain	MG4
DUF1240	PF06836.12	gi|289595688|ref|YP_003482384.1|	-	0.019	15.5	0.1	0.15	12.6	0.0	2.7	2	0	0	2	2	1	0	Protein	of	unknown	function	(DUF1240)
MaoC_dehydrat_N	PF13452.6	gi|289595688|ref|YP_003482384.1|	-	0.04	14.0	0.1	0.29	11.3	0.1	2.3	2	0	0	2	2	2	0	N-terminal	half	of	MaoC	dehydratase
RecR	PF02132.15	gi|289595688|ref|YP_003482384.1|	-	0.57	9.8	12.7	9	6.0	0.3	3.4	3	0	0	3	3	3	0	RecR	protein
zf-LITAF-like	PF10601.9	gi|289595688|ref|YP_003482384.1|	-	0.79	10.0	8.5	3.2	8.1	0.0	3.3	3	1	0	3	3	3	0	LITAF-like	zinc	ribbon	domain
FeoB_associated	PF12669.7	gi|289595688|ref|YP_003482384.1|	-	1	9.8	7.6	0.045	14.2	1.5	2.0	2	0	0	2	2	1	0	FeoB-associated	Cys-rich	membrane	protein
DUF35_N	PF12172.8	gi|289595688|ref|YP_003482384.1|	-	1	9.3	23.1	0.51	10.3	1.9	4.1	2	1	3	5	5	5	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-Sec23_Sec24	PF04810.15	gi|289595688|ref|YP_003482384.1|	-	2.9	8.0	7.3	2.6	8.2	0.3	3.5	3	1	1	4	4	4	0	Sec23/Sec24	zinc	finger
DHHC	PF01529.20	gi|289595688|ref|YP_003482384.1|	-	7.9	6.6	10.1	3.9	7.6	0.4	3.7	3	1	1	4	4	4	0	DHHC	palmitoyltransferase
zf-P11	PF03854.14	gi|289595688|ref|YP_003482384.1|	-	9.1	6.0	6.6	29	4.4	0.4	3.0	3	0	0	3	3	3	0	P-11	zinc	finger
Met_10	PF02475.16	gi|289595689|ref|YP_003482385.1|	-	2.4e-56	190.6	0.1	3.3e-56	190.2	0.1	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
Trm5_N	PF18093.1	gi|289595689|ref|YP_003482385.1|	-	1.2e-13	50.7	0.4	2.7e-13	49.6	0.4	1.6	1	0	0	1	1	1	1	tRNA	methyltransferase	5	N-terminal	domain
Methyltransf_18	PF12847.7	gi|289595689|ref|YP_003482385.1|	-	0.00029	20.8	0.1	0.066	13.1	0.0	2.3	2	0	0	2	2	2	2	Methyltransferase	domain
MTS	PF05175.14	gi|289595689|ref|YP_003482385.1|	-	0.00079	19.0	0.0	0.0011	18.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Cons_hypoth95	PF03602.15	gi|289595689|ref|YP_003482385.1|	-	0.017	14.8	0.0	0.031	13.9	0.0	1.4	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
tRNA_U5-meth_tr	PF05958.11	gi|289595689|ref|YP_003482385.1|	-	0.03	13.3	0.0	0.063	12.3	0.0	1.5	1	0	0	1	1	1	0	tRNA	(Uracil-5-)-methyltransferase
SpoIISA_toxin	PF14171.6	gi|289595689|ref|YP_003482385.1|	-	0.032	13.9	0.7	6.4	6.4	0.0	2.6	3	0	0	3	3	3	0	Toxin	SpoIISA,	type	II	toxin-antitoxin	system
PrmA	PF06325.13	gi|289595689|ref|YP_003482385.1|	-	0.072	12.5	0.0	0.16	11.3	0.0	1.6	1	1	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
DNA_methylase	PF00145.17	gi|289595689|ref|YP_003482385.1|	-	0.086	12.2	0.0	0.16	11.2	0.0	1.5	1	0	0	1	1	1	0	C-5	cytosine-specific	DNA	methylase
DUF202	PF02656.15	gi|289595690|ref|YP_003482386.1|	-	0.68	10.4	0.1	0.68	10.4	0.1	3.0	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF202)
CbiM	PF01891.16	gi|289595690|ref|YP_003482386.1|	-	1	9.1	9.5	0.86	9.4	1.3	2.2	2	0	0	2	2	2	0	Cobalt	uptake	substrate-specific	transmembrane	region
DUF2070	PF09843.9	gi|289595690|ref|YP_003482386.1|	-	3.3	5.9	18.2	0.62	8.3	9.9	2.0	1	1	1	2	2	2	0	Predicted	membrane	protein	(DUF2070)
Transglut_core	PF01841.19	gi|289595691|ref|YP_003482387.1|	-	2.9e-15	56.7	0.0	5.8e-15	55.7	0.0	1.5	1	0	0	1	1	1	1	Transglutaminase-like	superfamily
Transglut_core3	PF13471.6	gi|289595691|ref|YP_003482387.1|	-	0.0062	16.4	0.0	0.011	15.6	0.0	1.3	1	0	0	1	1	1	1	Transglutaminase-like	superfamily
DUF2407	PF10302.9	gi|289595691|ref|YP_003482387.1|	-	0.0085	16.6	0.1	0.016	15.7	0.1	1.4	1	0	0	1	1	1	1	DUF2407	ubiquitin-like	domain
DUF1275	PF06912.11	gi|289595691|ref|YP_003482387.1|	-	0.066	13.1	0.1	0.12	12.3	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1275)
DUF997	PF06196.12	gi|289595691|ref|YP_003482387.1|	-	0.68	10.0	8.7	1.9	8.6	1.1	2.9	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF997)
DUF1030	PF06270.11	gi|289595692|ref|YP_003482388.1|	-	0.073	12.8	0.4	0.15	11.8	0.4	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1030)
Chlamy_scaf	PF09675.10	gi|289595693|ref|YP_003482389.1|	-	0.012	15.9	0.1	0.014	15.7	0.1	1.1	1	0	0	1	1	1	0	Chlamydia-phage	Chp2	scaffold	(Chlamy_scaf)
DrrA_P4M	PF14860.6	gi|289595693|ref|YP_003482389.1|	-	0.024	14.5	0.3	0.025	14.4	0.3	1.1	1	0	0	1	1	1	0	DrrA	phosphatidylinositol	4-phosphate	binding	domain
DUF3688	PF12461.8	gi|289595694|ref|YP_003482390.1|	-	0.0096	14.4	2.7	0.011	14.2	2.7	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3688)
COX14	PF14880.6	gi|289595694|ref|YP_003482390.1|	-	0.07	13.0	0.6	0.07	13.0	0.6	1.7	2	0	0	2	2	2	0	Cytochrome	oxidase	c	assembly
DUF973	PF06157.11	gi|289595694|ref|YP_003482390.1|	-	0.11	11.5	6.1	0.15	11.1	6.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF973)
Imm63	PF15599.6	gi|289595694|ref|YP_003482390.1|	-	0.12	12.8	0.4	0.18	12.2	0.4	1.3	1	0	0	1	1	1	0	Immunity	protein	63
EcsB	PF05975.12	gi|289595694|ref|YP_003482390.1|	-	0.13	11.1	9.3	0.16	10.8	9.3	1.0	1	0	0	1	1	1	0	Bacterial	ABC	transporter	protein	EcsB
FtsH_ext	PF06480.15	gi|289595694|ref|YP_003482390.1|	-	0.14	12.6	0.0	0.14	12.6	0.0	2.5	2	1	1	3	3	3	0	FtsH	Extracellular
FtsX	PF02687.21	gi|289595694|ref|YP_003482390.1|	-	0.2	12.1	10.0	0.37	11.3	10.0	1.5	1	1	0	1	1	1	0	FtsX-like	permease	family
COX6C	PF02937.15	gi|289595694|ref|YP_003482390.1|	-	0.41	10.8	0.1	0.41	10.8	0.1	2.2	2	1	1	3	3	3	0	Cytochrome	c	oxidase	subunit	VIc
DUF2070	PF09843.9	gi|289595694|ref|YP_003482390.1|	-	0.58	8.4	6.9	0.67	8.2	6.9	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
DHHC	PF01529.20	gi|289595694|ref|YP_003482390.1|	-	0.99	9.5	6.6	0.35	11.0	3.7	1.6	1	1	1	2	2	2	0	DHHC	palmitoyltransferase
EI24	PF07264.11	gi|289595694|ref|YP_003482390.1|	-	2.2	8.5	11.2	2.8	8.2	11.2	1.1	1	0	0	1	1	1	0	Etoposide-induced	protein	2.4	(EI24)
Serinc	PF03348.15	gi|289595694|ref|YP_003482390.1|	-	5.5	5.8	8.4	6.1	5.6	8.4	1.0	1	0	0	1	1	1	0	Serine	incorporator	(Serinc)
Phage_holin_3_6	PF07332.11	gi|289595694|ref|YP_003482390.1|	-	5.7	7.0	20.2	1.8	8.7	10.6	2.1	1	1	1	2	2	2	0	Putative	Actinobacterial	Holin-X,	holin	superfamily	III
Elf1	PF05129.13	gi|289595695|ref|YP_003482391.1|	-	0.00081	19.4	1.0	0.0019	18.2	1.0	1.6	1	0	0	1	1	1	1	Transcription	elongation	factor	Elf1	like
GTP_EFTU_D4	PF14578.6	gi|289595695|ref|YP_003482391.1|	-	0.0078	16.1	1.7	0.062	13.2	0.1	2.2	1	1	1	2	2	2	1	Elongation	factor	Tu	domain	4
DUF951	PF06107.11	gi|289595695|ref|YP_003482391.1|	-	0.021	14.7	3.7	10	6.1	0.1	3.5	2	1	1	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF951)
zf-ZPR1	PF03367.13	gi|289595695|ref|YP_003482391.1|	-	0.032	14.1	1.4	0.054	13.4	1.3	1.5	1	1	0	1	1	1	0	ZPR1	zinc-finger	domain
zinc_ribbon_4	PF13717.6	gi|289595695|ref|YP_003482391.1|	-	0.036	14.0	1.5	0.63	10.0	1.5	2.5	1	1	0	1	1	1	0	zinc-ribbon	domain
zf_Rg	PF17915.1	gi|289595695|ref|YP_003482391.1|	-	0.045	13.1	0.7	0.17	11.3	0.1	2.0	2	0	0	2	2	2	0	Reverse	gyrase	zinc	finger
Lar_restr_allev	PF14354.6	gi|289595695|ref|YP_003482391.1|	-	0.047	14.1	0.3	0.091	13.2	0.3	1.4	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
EF1_GNE	PF00736.19	gi|289595695|ref|YP_003482391.1|	-	0.059	13.6	3.0	0.17	12.1	1.0	2.4	2	1	0	2	2	2	0	EF-1	guanine	nucleotide	exchange	domain
Zn-ribbon_8	PF09723.10	gi|289595695|ref|YP_003482391.1|	-	0.059	13.5	3.1	5.9	7.1	1.0	2.5	2	0	0	2	2	2	0	Zinc	ribbon	domain
DUF2387	PF09526.10	gi|289595695|ref|YP_003482391.1|	-	0.066	13.4	1.4	0.16	12.1	0.4	2.1	2	0	0	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
zf-NADH-PPase	PF09297.11	gi|289595695|ref|YP_003482391.1|	-	0.13	11.9	0.3	8	6.2	0.1	2.3	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
zinc_ribbon_2	PF13240.6	gi|289595695|ref|YP_003482391.1|	-	0.15	11.8	6.4	3.4	7.5	0.3	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
HalOD2	PF18547.1	gi|289595695|ref|YP_003482391.1|	-	0.2	11.6	0.2	0.41	10.6	0.2	1.4	1	0	0	1	1	1	0	Halobacterial	output	domain	2
zf-C2HC_2	PF13913.6	gi|289595695|ref|YP_003482391.1|	-	0.24	11.3	1.0	1.8	8.6	0.0	2.2	2	0	0	2	2	2	0	zinc-finger	of	a	C2HC-type
Sgf11	PF08209.11	gi|289595695|ref|YP_003482391.1|	-	0.35	10.5	3.2	0.89	9.2	0.3	2.2	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
Ogr_Delta	PF04606.12	gi|289595695|ref|YP_003482391.1|	-	0.37	10.8	4.0	1	9.4	4.0	1.8	1	1	0	1	1	1	0	Ogr/Delta-like	zinc	finger
zf-HYPF	PF07503.12	gi|289595695|ref|YP_003482391.1|	-	0.69	9.7	3.1	10	6.0	0.2	2.3	2	0	0	2	2	2	0	HypF	finger
Rubredoxin_2	PF18073.1	gi|289595695|ref|YP_003482391.1|	-	1.7	8.4	5.4	0.92	9.3	0.3	2.2	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
BNR_2	PF13088.6	gi|289595696|ref|YP_003482392.1|	-	1e-09	38.1	4.6	1.5e-08	34.3	4.6	2.2	1	1	0	1	1	1	1	BNR	repeat-like	domain
TPR_2	PF07719.17	gi|289595696|ref|YP_003482392.1|	-	0.00084	19.3	0.2	0.013	15.6	0.0	2.5	2	0	0	2	2	2	1	Tetratricopeptide	repeat
BNR_assoc_N	PF14873.6	gi|289595696|ref|YP_003482392.1|	-	0.0013	18.4	2.5	0.0015	18.2	0.2	2.1	2	0	0	2	2	2	1	N-terminal	domain	of	BNR-repeat	neuraminidase
TPR_21	PF09976.9	gi|289595696|ref|YP_003482392.1|	-	0.0043	16.8	0.0	0.0082	15.9	0.0	1.4	1	0	0	1	1	1	1	Tetratricopeptide	repeat-like	domain
BNR	PF02012.20	gi|289595696|ref|YP_003482392.1|	-	0.022	14.7	19.1	3	8.2	0.1	5.2	4	0	0	4	4	4	0	BNR/Asp-box	repeat
TPR_8	PF13181.6	gi|289595696|ref|YP_003482392.1|	-	0.032	14.4	1.8	0.11	12.8	0.1	2.6	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_9	PF13371.6	gi|289595696|ref|YP_003482392.1|	-	0.22	11.7	0.0	0.4	10.9	0.0	1.3	1	0	0	1	1	1	0	Tetratricopeptide	repeat
Alba	PF01918.21	gi|289595697|ref|YP_003482393.1|	-	1.3e-20	72.9	1.0	1.7e-20	72.6	1.0	1.1	1	0	0	1	1	1	1	Alba
Rpp20	PF12328.8	gi|289595697|ref|YP_003482393.1|	-	0.0095	15.9	0.3	0.015	15.3	0.2	1.5	1	1	0	1	1	1	1	Rpp20	subunit	of	nuclear	RNase	MRP	and	P
MMPL	PF03176.15	gi|289595698|ref|YP_003482394.1|	-	1.9e-52	178.3	4.9	1.9e-29	102.7	3.6	2.4	2	0	0	2	2	2	2	MMPL	family
Sterol-sensing	PF12349.8	gi|289595698|ref|YP_003482394.1|	-	1.4e-20	73.7	4.2	1.7e-09	37.7	0.8	2.7	2	0	0	2	2	2	2	Sterol-sensing	domain	of	SREBP	cleavage-activation
Patched	PF02460.18	gi|289595698|ref|YP_003482394.1|	-	2.6e-17	62.2	41.1	1.4e-16	59.8	36.2	3.5	2	1	0	2	2	2	1	Patched	family
ACR_tran	PF00873.19	gi|289595698|ref|YP_003482394.1|	-	1.9e-05	22.6	26.9	0.00035	18.4	7.4	2.6	3	0	0	3	3	3	2	AcrB/AcrD/AcrF	family
DASH_Dam1	PF08653.10	gi|289595698|ref|YP_003482394.1|	-	0.036	13.9	1.0	0.3	10.9	0.2	3.2	2	0	0	2	2	2	0	DASH	complex	subunit	Dam1
HTH_24	PF13412.6	gi|289595699|ref|YP_003482395.1|	-	8.4e-11	41.3	0.0	1.7e-06	27.5	0.0	2.5	2	0	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.19	gi|289595699|ref|YP_003482395.1|	-	4.6e-08	32.8	0.0	0.00032	20.5	0.0	2.4	2	0	0	2	2	2	2	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.22	gi|289595699|ref|YP_003482395.1|	-	2.1e-07	30.7	0.0	0.00035	20.5	0.0	2.4	2	0	0	2	2	2	2	MarR	family
MarR_2	PF12802.7	gi|289595699|ref|YP_003482395.1|	-	9.2e-07	28.7	0.0	0.0017	18.2	0.0	2.3	2	0	0	2	2	2	2	MarR	family
Fe_dep_repress	PF01325.19	gi|289595699|ref|YP_003482395.1|	-	3.3e-05	24.0	0.0	0.037	14.2	0.0	2.5	2	0	0	2	2	2	2	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_AsnC-type	PF13404.6	gi|289595699|ref|YP_003482395.1|	-	4e-05	23.4	0.0	0.0053	16.6	0.0	2.4	2	0	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
HTH_Crp_2	PF13545.6	gi|289595699|ref|YP_003482395.1|	-	4.9e-05	23.2	0.0	0.18	11.8	0.0	2.4	2	0	0	2	2	2	2	Crp-like	helix-turn-helix	domain
Rrf2	PF02082.20	gi|289595699|ref|YP_003482395.1|	-	0.0064	16.8	0.1	1.9	8.9	0.1	2.3	2	0	0	2	2	2	1	Transcriptional	regulator
HTH_5	PF01022.20	gi|289595699|ref|YP_003482395.1|	-	0.0092	15.8	0.0	0.043	13.7	0.0	2.0	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_11	PF08279.12	gi|289595699|ref|YP_003482395.1|	-	0.035	14.0	0.0	0.13	12.2	0.0	2.0	2	0	0	2	2	2	0	HTH	domain
HTH_32	PF13565.6	gi|289595699|ref|YP_003482395.1|	-	0.052	14.2	0.0	0.19	12.4	0.0	1.8	2	0	0	2	2	2	0	Homeodomain-like	domain
HTH_27	PF13463.6	gi|289595699|ref|YP_003482395.1|	-	0.1	13.1	0.0	14	6.3	0.0	2.4	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
HTH_28	PF13518.6	gi|289595699|ref|YP_003482395.1|	-	0.11	12.7	0.0	1.8	8.8	0.0	2.3	2	0	0	2	2	2	0	Helix-turn-helix	domain
BRCT_assoc	PF12820.7	gi|289595699|ref|YP_003482395.1|	-	0.12	12.2	0.1	0.18	11.6	0.1	1.3	1	0	0	1	1	1	0	Serine-rich	domain	associated	with	BRCT
Peptidase_M20	PF01546.28	gi|289595700|ref|YP_003482396.1|	-	2.5e-30	105.7	0.3	3.4e-30	105.3	0.3	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.14	gi|289595700|ref|YP_003482396.1|	-	3.5e-13	49.4	0.0	7.8e-13	48.3	0.0	1.6	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
DUF5603	PF18231.1	gi|289595700|ref|YP_003482396.1|	-	0.089	13.1	0.1	1.1	9.6	0.0	2.6	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF5603)
NdhM	PF10664.9	gi|289595701|ref|YP_003482397.1|	-	0.013	15.7	0.7	0.013	15.7	0.7	1.9	2	1	0	2	2	2	0	Cyanobacterial	and	plastid	NDH-1	subunit	M
DHquinase_II	PF01220.19	gi|289595701|ref|YP_003482397.1|	-	1.5	8.5	4.1	20	4.9	0.5	2.2	2	0	0	2	2	2	0	Dehydroquinase	class	II
Ribosomal_S19e	PF01090.19	gi|289595702|ref|YP_003482398.1|	-	4.9e-55	185.0	0.3	5.6e-55	184.8	0.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S19e
HTH_45	PF14947.6	gi|289595702|ref|YP_003482398.1|	-	0.0017	18.3	0.0	0.0028	17.6	0.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix
RuvB_C	PF05491.13	gi|289595702|ref|YP_003482398.1|	-	0.003	17.4	0.3	0.017	15.0	0.0	2.3	3	1	0	3	3	3	1	RuvB	C-terminal	winged	helix	domain
GntR	PF00392.21	gi|289595702|ref|YP_003482398.1|	-	0.017	14.7	0.0	0.051	13.2	0.0	1.8	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
HTH_12	PF08461.10	gi|289595702|ref|YP_003482398.1|	-	0.02	14.8	0.2	0.052	13.5	0.2	1.8	1	1	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
HemN_C	PF06969.16	gi|289595702|ref|YP_003482398.1|	-	0.11	12.6	0.0	0.21	11.7	0.0	1.5	1	0	0	1	1	1	0	HemN	C-terminal	domain
DUF4423	PF14394.6	gi|289595702|ref|YP_003482398.1|	-	0.12	12.1	0.0	0.2	11.4	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
dsDNA_bind	PF01984.20	gi|289595703|ref|YP_003482399.1|	-	1.1e-26	93.3	17.9	1.3e-26	93.1	17.9	1.0	1	0	0	1	1	1	1	Double-stranded	DNA-binding	domain
SurA_N_2	PF13623.6	gi|289595703|ref|YP_003482399.1|	-	0.59	10.0	7.4	11	5.8	6.0	2.0	1	1	1	2	2	2	0	SurA	N-terminal	domain
Ribosomal_L39	PF00832.20	gi|289595704|ref|YP_003482400.1|	-	1.6e-19	69.2	15.4	2e-19	69.0	15.4	1.1	1	0	0	1	1	1	1	Ribosomal	L39	protein
Ribosomal_L31e	PF01198.19	gi|289595705|ref|YP_003482401.1|	-	1.1e-10	41.6	0.9	1.4e-10	41.3	0.9	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L31e
eIF-6	PF01912.18	gi|289595706|ref|YP_003482402.1|	-	5.5e-68	228.3	7.2	1.5e-66	223.6	4.5	1.5	1	1	1	2	2	2	2	eIF-6	family
Lactamase_B_3	PF13483.6	gi|289595707|ref|YP_003482403.1|	-	1e-48	165.4	1.3	1.2e-48	165.1	1.3	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.7	gi|289595707|ref|YP_003482403.1|	-	2.9e-10	40.0	5.8	1.8e-07	30.9	0.0	2.1	1	1	1	2	2	2	2	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|289595707|ref|YP_003482403.1|	-	0.0011	19.0	5.8	0.14	12.2	4.9	2.2	2	0	0	2	2	2	2	Metallo-beta-lactamase	superfamily
MTS	PF05175.14	gi|289595708|ref|YP_003482404.1|	-	3.4e-19	69.0	0.0	4.7e-18	65.3	0.0	1.9	1	1	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.6	gi|289595708|ref|YP_003482404.1|	-	4e-10	39.7	0.0	5.1e-10	39.3	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|289595708|ref|YP_003482404.1|	-	1.7e-09	38.3	0.0	2.8e-09	37.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|289595708|ref|YP_003482404.1|	-	1e-08	35.2	0.0	2.6e-08	33.9	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.13	gi|289595708|ref|YP_003482404.1|	-	4e-08	33.0	0.2	6.4e-08	32.3	0.2	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Cons_hypoth95	PF03602.15	gi|289595708|ref|YP_003482404.1|	-	2.2e-07	30.7	0.0	9.1e-07	28.7	0.0	1.8	2	0	0	2	2	2	1	Conserved	hypothetical	protein	95
Methyltransf_12	PF08242.12	gi|289595708|ref|YP_003482404.1|	-	3.4e-06	27.7	0.0	9.8e-06	26.2	0.0	1.7	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|289595708|ref|YP_003482404.1|	-	3.5e-06	27.6	0.0	5.6e-06	26.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.7	gi|289595708|ref|YP_003482404.1|	-	3.8e-06	26.9	0.2	7.6e-06	25.9	0.2	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
TehB	PF03848.14	gi|289595708|ref|YP_003482404.1|	-	9.8e-06	25.1	0.0	1.3e-05	24.7	0.0	1.1	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
CMAS	PF02353.20	gi|289595708|ref|YP_003482404.1|	-	4.5e-05	22.9	0.1	6.8e-05	22.3	0.1	1.2	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Met_10	PF02475.16	gi|289595708|ref|YP_003482404.1|	-	0.00032	20.5	0.0	0.0004	20.2	0.0	1.3	1	0	0	1	1	1	1	Met-10+	like-protein
DUF2431	PF10354.9	gi|289595708|ref|YP_003482404.1|	-	0.0006	20.1	0.0	0.00069	19.9	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF2431)
UPF0020	PF01170.18	gi|289595708|ref|YP_003482404.1|	-	0.00098	18.9	0.4	0.0068	16.1	0.4	2.3	1	1	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
DUF43	PF01861.16	gi|289595708|ref|YP_003482404.1|	-	0.001	18.3	0.0	0.0015	17.8	0.0	1.2	1	0	0	1	1	1	1	Branched-chain	polyamine	synthase	A	C-terminal	domain
rRNA_methylase	PF06962.12	gi|289595708|ref|YP_003482404.1|	-	0.0011	18.9	0.0	0.0022	18.0	0.0	1.4	1	0	0	1	1	1	1	Putative	rRNA	methylase
NodS	PF05401.11	gi|289595708|ref|YP_003482404.1|	-	0.0013	18.4	0.0	0.0018	17.9	0.0	1.2	1	0	0	1	1	1	1	Nodulation	protein	S	(NodS)
Methyltransf_15	PF09445.10	gi|289595708|ref|YP_003482404.1|	-	0.0016	18.1	0.0	0.0027	17.3	0.0	1.4	1	1	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
RrnaAD	PF00398.20	gi|289595708|ref|YP_003482404.1|	-	0.0041	16.2	0.0	0.0061	15.7	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
bZIP_2	PF07716.15	gi|289595708|ref|YP_003482404.1|	-	0.021	14.9	0.5	0.037	14.1	0.5	1.4	1	0	0	1	1	1	0	Basic	region	leucine	zipper
PCMT	PF01135.19	gi|289595708|ref|YP_003482404.1|	-	0.025	14.3	0.0	0.034	13.9	0.0	1.1	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Eco57I	PF07669.11	gi|289595708|ref|YP_003482404.1|	-	0.025	15.1	1.0	0.12	12.9	0.2	2.0	1	1	1	2	2	2	0	Eco57I	restriction-modification	methylase
DREV	PF05219.12	gi|289595708|ref|YP_003482404.1|	-	0.028	13.5	0.0	0.045	12.9	0.0	1.2	1	0	0	1	1	1	0	DREV	methyltransferase
UPF0146	PF03686.13	gi|289595708|ref|YP_003482404.1|	-	0.032	14.1	0.1	0.049	13.5	0.1	1.3	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0146)
Methyltransf_4	PF02390.17	gi|289595708|ref|YP_003482404.1|	-	0.035	13.6	0.1	0.058	12.9	0.1	1.3	1	0	0	1	1	1	0	Putative	methyltransferase
3HCDH_N	PF02737.18	gi|289595708|ref|YP_003482404.1|	-	0.055	13.3	0.1	0.076	12.9	0.1	1.2	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
UDPG_MGDP_dh_N	PF03721.14	gi|289595708|ref|YP_003482404.1|	-	0.072	12.7	0.1	0.094	12.3	0.1	1.2	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Methyltransf_3	PF01596.17	gi|289595708|ref|YP_003482404.1|	-	0.076	12.2	0.1	0.1	11.8	0.1	1.2	1	0	0	1	1	1	0	O-methyltransferase
Ubie_methyltran	PF01209.18	gi|289595708|ref|YP_003482404.1|	-	0.079	12.3	1.0	1.6	8.0	0.2	2.1	1	1	1	2	2	2	0	ubiE/COQ5	methyltransferase	family
Methyltransf_16	PF10294.9	gi|289595708|ref|YP_003482404.1|	-	0.083	12.6	0.1	0.12	12.1	0.1	1.2	1	0	0	1	1	1	0	Lysine	methyltransferase
MazG	PF03819.17	gi|289595709|ref|YP_003482405.1|	-	6.5e-09	35.8	1.1	6.5e-09	35.8	1.1	1.6	2	0	0	2	2	2	1	MazG	nucleotide	pyrophosphohydrolase	domain
MazG-like	PF12643.7	gi|289595709|ref|YP_003482405.1|	-	0.0041	17.4	0.0	0.0066	16.7	0.0	1.4	1	0	0	1	1	1	1	MazG-like	family
PRA-PH	PF01503.17	gi|289595709|ref|YP_003482405.1|	-	0.043	14.3	1.3	0.061	13.8	1.3	1.4	1	1	0	1	1	1	0	Phosphoribosyl-ATP	pyrophosphohydrolase
ATPase	PF06745.13	gi|289595710|ref|YP_003482406.1|	-	0.00017	21.0	0.0	0.00023	20.6	0.0	1.1	1	0	0	1	1	1	1	KaiC
DUF835	PF05763.12	gi|289595710|ref|YP_003482406.1|	-	0.0018	18.0	1.7	0.003	17.3	0.3	2.0	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF835)
GBR2_CC	PF18455.1	gi|289595710|ref|YP_003482406.1|	-	0.1	12.7	0.4	0.23	11.6	0.4	1.6	1	1	0	1	1	1	0	Gamma-aminobutyric	acid	type	B	receptor	subunit	2	coiled-coil	domain
ATPase	PF06745.13	gi|289595711|ref|YP_003482407.1|	-	3.6e-28	98.5	0.0	4.9e-28	98.1	0.0	1.2	1	0	0	1	1	1	1	KaiC
RecA	PF00154.21	gi|289595711|ref|YP_003482407.1|	-	2.6e-07	30.4	0.1	4.2e-07	29.7	0.1	1.4	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
Rad51	PF08423.11	gi|289595711|ref|YP_003482407.1|	-	0.00051	19.4	0.0	0.00088	18.6	0.0	1.4	1	0	0	1	1	1	1	Rad51
AAA_25	PF13481.6	gi|289595711|ref|YP_003482407.1|	-	0.0017	18.0	0.0	0.0029	17.2	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.17	gi|289595711|ref|YP_003482407.1|	-	0.0062	16.3	0.0	0.012	15.4	0.0	1.5	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
GvpD	PF07088.11	gi|289595711|ref|YP_003482407.1|	-	0.011	14.3	0.1	0.026	13.1	0.1	1.4	1	1	0	1	1	1	0	GvpD	gas	vesicle	protein
PAXNEB	PF05625.11	gi|289595711|ref|YP_003482407.1|	-	0.032	13.4	0.0	0.053	12.7	0.0	1.3	1	0	0	1	1	1	0	PAXNEB	protein
AAA_16	PF13191.6	gi|289595711|ref|YP_003482407.1|	-	0.033	14.6	0.0	0.041	14.3	0.0	1.3	1	1	0	1	1	1	0	AAA	ATPase	domain
PhoH	PF02562.16	gi|289595711|ref|YP_003482407.1|	-	0.039	13.4	0.1	0.54	9.7	0.0	2.1	2	0	0	2	2	2	0	PhoH-like	protein
AAA_24	PF13479.6	gi|289595711|ref|YP_003482407.1|	-	0.043	13.5	0.7	0.19	11.4	0.7	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_22	PF13401.6	gi|289595711|ref|YP_003482407.1|	-	0.069	13.4	0.2	0.28	11.4	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
NACHT	PF05729.12	gi|289595711|ref|YP_003482407.1|	-	0.13	12.2	0.1	0.41	10.6	0.0	1.7	2	0	0	2	2	2	0	NACHT	domain
FR47	PF08445.10	gi|289595712|ref|YP_003482408.1|	-	3.6e-11	42.9	0.0	5.5e-11	42.3	0.0	1.3	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_1	PF00583.25	gi|289595712|ref|YP_003482408.1|	-	9.5e-09	35.5	0.1	1.7e-08	34.7	0.1	1.6	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.7	gi|289595712|ref|YP_003482408.1|	-	1.9e-06	28.2	0.0	3.6e-06	27.3	0.0	1.5	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
GNAT_acetyltran	PF12746.7	gi|289595712|ref|YP_003482408.1|	-	3.5e-06	26.8	0.1	7.3e-06	25.7	0.1	1.5	1	1	0	1	1	1	1	GNAT	acetyltransferase
Acetyltransf_10	PF13673.7	gi|289595712|ref|YP_003482408.1|	-	0.0002	21.3	0.0	0.00037	20.4	0.0	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.6	gi|289595712|ref|YP_003482408.1|	-	0.003	17.2	0.0	0.015	14.9	0.0	1.9	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.7	gi|289595712|ref|YP_003482408.1|	-	0.0054	16.8	0.1	0.016	15.2	0.1	1.7	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.7	gi|289595712|ref|YP_003482408.1|	-	0.0054	17.4	0.1	0.013	16.1	0.0	1.7	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Corona_RPol_N	PF06478.13	gi|289595713|ref|YP_003482409.1|	-	0.018	14.0	0.0	0.019	14.0	0.0	1.0	1	0	0	1	1	1	0	Coronavirus	RPol	N-terminus
PhoU_div	PF01865.16	gi|289595714|ref|YP_003482410.1|	-	6.2e-31	107.4	13.0	7e-31	107.2	13.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF47
HMG_box_2	PF09011.10	gi|289595714|ref|YP_003482410.1|	-	0.039	14.5	3.6	0.15	12.7	0.8	2.4	2	0	0	2	2	2	0	HMG-box	domain
UMP1	PF05348.11	gi|289595714|ref|YP_003482410.1|	-	0.066	13.4	0.1	1.4	9.2	0.0	2.4	1	1	1	2	2	2	0	Proteasome	maturation	factor	UMP1
CENP-Q	PF13094.6	gi|289595714|ref|YP_003482410.1|	-	0.095	12.9	1.9	0.099	12.8	1.0	1.4	1	1	0	1	1	1	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
HMG_box	PF00505.19	gi|289595714|ref|YP_003482410.1|	-	0.28	11.6	0.2	0.28	11.6	0.2	2.5	2	0	0	2	2	2	0	HMG	(high	mobility	group)	box
AROS	PF15684.5	gi|289595714|ref|YP_003482410.1|	-	0.33	11.5	4.5	1.6	9.3	0.3	2.1	2	0	0	2	2	2	0	Active	regulator	of	SIRT1,	or	40S	ribosomal	protein	S19-binding	1
MT0933_antitox	PF14013.6	gi|289595714|ref|YP_003482410.1|	-	1	9.7	4.5	17	5.8	0.1	3.4	3	0	0	3	3	3	0	MT0933-like	antitoxin	protein
Spc29	PF17082.5	gi|289595714|ref|YP_003482410.1|	-	1.2	9.0	5.4	8.2	6.2	0.8	2.3	1	1	1	2	2	2	0	Spindle	Pole	Component	29
DUF1664	PF07889.12	gi|289595714|ref|YP_003482410.1|	-	1.2	9.2	6.7	1.7	8.7	0.3	3.0	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1664)
PhoU	PF01895.19	gi|289595714|ref|YP_003482410.1|	-	1.5	9.4	11.6	0.28	11.7	1.7	3.1	1	1	1	2	2	2	0	PhoU	domain
PHO4	PF01384.20	gi|289595715|ref|YP_003482411.1|	-	1.5e-45	155.7	35.7	3.4e-45	154.6	33.6	2.2	1	1	1	2	2	2	2	Phosphate	transporter	family
N6_N4_Mtase	PF01555.18	gi|289595716|ref|YP_003482412.1|	-	7.6e-22	78.1	1.1	1.6e-12	47.7	0.0	2.2	2	0	0	2	2	2	2	DNA	methylase
Cons_hypoth95	PF03602.15	gi|289595716|ref|YP_003482412.1|	-	5.2e-05	23.0	0.0	7.4e-05	22.5	0.0	1.2	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
UPF0020	PF01170.18	gi|289595716|ref|YP_003482412.1|	-	0.0016	18.1	0.0	0.018	14.7	0.0	2.2	1	1	1	2	2	2	1	Putative	RNA	methylase	family	UPF0020
Met_10	PF02475.16	gi|289595716|ref|YP_003482412.1|	-	0.0063	16.3	0.0	0.0094	15.7	0.0	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_15	PF09445.10	gi|289595716|ref|YP_003482412.1|	-	0.032	13.8	0.0	0.05	13.2	0.0	1.4	1	0	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
Methyltransf_25	PF13649.6	gi|289595716|ref|YP_003482412.1|	-	0.035	14.8	0.0	0.053	14.2	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
CMAS	PF02353.20	gi|289595716|ref|YP_003482412.1|	-	0.067	12.5	0.0	0.12	11.7	0.0	1.3	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
AA_kinase	PF00696.28	gi|289595717|ref|YP_003482413.1|	-	2.7e-29	102.5	0.0	3.3e-29	102.2	0.0	1.1	1	0	0	1	1	1	1	Amino	acid	kinase	family
DUF872	PF05915.12	gi|289595718|ref|YP_003482414.1|	-	0.43	10.8	3.5	7.1	6.8	0.1	2.3	2	0	0	2	2	2	0	Eukaryotic	protein	of	unknown	function	(DUF872)
Deltameth_res	PF16020.5	gi|289595718|ref|YP_003482414.1|	-	0.48	10.3	0.2	0.48	10.3	0.2	2.7	2	1	1	3	3	3	0	Deltamethrin	resistance
DS	PF01916.17	gi|289595719|ref|YP_003482415.1|	-	7.3e-107	356.9	0.0	8.2e-107	356.7	0.0	1.0	1	0	0	1	1	1	1	Deoxyhypusine	synthase
tRNA-synt_1b	PF00579.25	gi|289595720|ref|YP_003482416.1|	-	4.9e-44	150.8	0.0	6.3e-44	150.4	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(W	and	Y)
SpoU_methylase	PF00588.19	gi|289595721|ref|YP_003482417.1|	-	9.6e-32	110.1	0.0	1.2e-31	109.7	0.0	1.1	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
Methyltrn_RNA_4	PF09936.9	gi|289595721|ref|YP_003482417.1|	-	0.018	14.9	0.0	0.049	13.5	0.0	1.8	1	1	0	1	1	1	0	SAM-dependent	RNA	methyltransferase
Cation_efflux	PF01545.21	gi|289595722|ref|YP_003482418.1|	-	5.7e-43	147.0	17.3	7.2e-43	146.6	17.3	1.1	1	0	0	1	1	1	1	Cation	efflux	family
ZT_dimer	PF16916.5	gi|289595722|ref|YP_003482418.1|	-	3.6e-23	81.5	3.2	3.6e-23	81.5	3.2	1.6	2	0	0	2	2	2	1	Dimerisation	domain	of	Zinc	Transporter
Nitro_FeMo-Co	PF02579.17	gi|289595722|ref|YP_003482418.1|	-	4.4e-14	52.6	0.0	9.6e-14	51.5	0.0	1.5	1	0	0	1	1	1	1	Dinitrogenase	iron-molybdenum	cofactor
DUF3278	PF11683.8	gi|289595722|ref|YP_003482418.1|	-	0.00041	20.4	3.0	0.00041	20.4	3.0	2.1	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF3278)
TM1506	PF08973.10	gi|289595722|ref|YP_003482418.1|	-	0.002	17.8	0.0	0.0058	16.3	0.0	1.8	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1893)
PRE_C2HC	PF07530.11	gi|289595722|ref|YP_003482418.1|	-	0.0074	16.4	1.4	0.028	14.5	1.4	2.0	1	1	0	1	1	1	1	Associated	with	zinc	fingers
YscJ_FliF	PF01514.17	gi|289595722|ref|YP_003482418.1|	-	0.048	13.3	0.3	0.14	11.8	0.3	1.7	1	0	0	1	1	1	0	Secretory	protein	of	YscJ/FliF	family
SPC12	PF06645.13	gi|289595722|ref|YP_003482418.1|	-	0.074	13.1	11.7	0.19	11.8	0.3	3.4	3	1	0	3	3	3	0	Microsomal	signal	peptidase	12	kDa	subunit	(SPC12)
DUF2070	PF09843.9	gi|289595723|ref|YP_003482419.1|	-	0.12	10.6	2.1	0.13	10.5	2.1	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
DUF5320	PF17253.2	gi|289595724|ref|YP_003482420.1|	-	1.6e-09	38.7	19.1	2.2e-06	28.6	19.1	2.2	1	1	0	1	1	1	1	Family	of	unknown	function	(DUF5320)
Keratin_2_head	PF16208.5	gi|289595724|ref|YP_003482420.1|	-	0.084	13.0	10.4	0.1	12.8	10.4	1.1	1	0	0	1	1	1	0	Keratin	type	II	head
Nitro_FeMo-Co	PF02579.17	gi|289595725|ref|YP_003482421.1|	-	3.5e-19	68.9	0.4	5e-19	68.4	0.0	1.4	2	0	0	2	2	2	1	Dinitrogenase	iron-molybdenum	cofactor
DUF5320	PF17253.2	gi|289595725|ref|YP_003482421.1|	-	4e-06	27.8	0.3	1e-05	26.5	0.3	1.9	1	1	0	1	1	1	1	Family	of	unknown	function	(DUF5320)
TMP_2	PF06791.13	gi|289595725|ref|YP_003482421.1|	-	0.037	13.7	3.6	0.056	13.1	3.6	1.2	1	0	0	1	1	1	0	Prophage	tail	length	tape	measure	protein
Prefoldin_2	PF01920.20	gi|289595725|ref|YP_003482421.1|	-	0.1	12.5	7.4	0.17	11.9	7.4	1.3	1	0	0	1	1	1	0	Prefoldin	subunit
ATPase	PF06745.13	gi|289595726|ref|YP_003482422.1|	-	2.8e-55	187.2	0.4	3.2e-55	187.0	0.4	1.0	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.6	gi|289595726|ref|YP_003482422.1|	-	4e-08	33.1	0.0	1.1e-07	31.6	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
DnaB_C	PF03796.15	gi|289595726|ref|YP_003482422.1|	-	5.2e-08	32.5	0.0	1.3e-07	31.2	0.0	1.6	1	1	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
AAA_22	PF13401.6	gi|289595726|ref|YP_003482422.1|	-	9.4e-05	22.7	0.0	0.00022	21.5	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
GvpD	PF07088.11	gi|289595726|ref|YP_003482422.1|	-	0.00091	18.0	0.0	0.0019	16.9	0.0	1.7	1	1	0	1	1	1	1	GvpD	gas	vesicle	protein
Rad51	PF08423.11	gi|289595726|ref|YP_003482422.1|	-	0.0015	17.9	0.6	0.053	12.8	0.1	2.1	2	0	0	2	2	2	1	Rad51
AAA_24	PF13479.6	gi|289595726|ref|YP_003482422.1|	-	0.0041	16.9	0.1	0.023	14.4	0.1	2.1	1	1	1	2	2	2	1	AAA	domain
T2SSE	PF00437.20	gi|289595726|ref|YP_003482422.1|	-	0.012	14.6	0.0	0.03	13.4	0.0	1.6	1	1	1	2	2	2	0	Type	II/IV	secretion	system	protein
AAA	PF00004.29	gi|289595726|ref|YP_003482422.1|	-	0.019	15.4	0.1	1.7	9.1	0.0	2.4	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
RecA	PF00154.21	gi|289595726|ref|YP_003482422.1|	-	0.021	14.3	0.2	0.12	11.8	0.1	1.9	2	0	0	2	2	2	0	recA	bacterial	DNA	recombination	protein
IstB_IS21	PF01695.17	gi|289595726|ref|YP_003482422.1|	-	0.026	14.2	0.1	0.067	12.9	0.0	1.7	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
ATPase_2	PF01637.18	gi|289595726|ref|YP_003482422.1|	-	0.035	14.0	0.0	0.052	13.5	0.0	1.2	1	0	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
DUF2075	PF09848.9	gi|289595726|ref|YP_003482422.1|	-	0.041	13.1	0.0	0.058	12.6	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_14	PF13173.6	gi|289595726|ref|YP_003482422.1|	-	0.041	13.9	0.0	0.16	12.0	0.0	2.1	1	1	0	1	1	1	0	AAA	domain
AAA_33	PF13671.6	gi|289595726|ref|YP_003482422.1|	-	0.052	13.7	0.0	0.068	13.3	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
Zot	PF05707.12	gi|289595726|ref|YP_003482422.1|	-	0.088	12.4	0.0	0.15	11.7	0.0	1.4	1	0	0	1	1	1	0	Zonular	occludens	toxin	(Zot)
AAA_29	PF13555.6	gi|289595726|ref|YP_003482422.1|	-	0.099	12.4	0.0	0.23	11.2	0.0	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_18	PF13238.6	gi|289595726|ref|YP_003482422.1|	-	0.12	13.0	0.5	0.21	12.2	0.5	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_19	PF13245.6	gi|289595726|ref|YP_003482422.1|	-	0.13	12.6	0.1	0.19	12.0	0.1	1.6	1	1	0	1	1	1	0	AAA	domain
cobW	PF02492.19	gi|289595726|ref|YP_003482422.1|	-	0.14	11.8	0.0	0.25	10.9	0.0	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
NACHT	PF05729.12	gi|289595726|ref|YP_003482422.1|	-	0.14	12.0	0.1	0.28	11.1	0.1	1.5	1	0	0	1	1	1	0	NACHT	domain
AAA_30	PF13604.6	gi|289595726|ref|YP_003482422.1|	-	0.16	11.7	0.1	0.34	10.6	0.1	1.5	2	0	0	2	2	2	0	AAA	domain
AAA_11	PF13086.6	gi|289595726|ref|YP_003482422.1|	-	0.18	11.5	0.0	0.3	10.9	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
TF_Zn_Ribbon	PF08271.12	gi|289595727|ref|YP_003482423.1|	-	1.3e-05	24.6	3.2	3e-05	23.4	3.2	1.6	1	0	0	1	1	1	1	TFIIB	zinc-binding
Zn_Tnp_IS1595	PF12760.7	gi|289595727|ref|YP_003482423.1|	-	0.00017	21.5	0.7	0.00026	20.9	0.7	1.3	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.11	gi|289595727|ref|YP_003482423.1|	-	0.00036	20.4	0.9	0.00075	19.4	0.9	1.5	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Zn-ribbon_8	PF09723.10	gi|289595727|ref|YP_003482423.1|	-	0.00075	19.6	1.0	0.69	10.1	0.1	2.4	2	0	0	2	2	2	2	Zinc	ribbon	domain
DUF35_N	PF12172.8	gi|289595727|ref|YP_003482423.1|	-	0.0012	18.6	0.7	0.0097	15.8	0.1	2.1	2	0	0	2	2	2	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Pico_P2B	PF01552.17	gi|289595727|ref|YP_003482423.1|	-	0.02	15.0	0.1	0.1	12.7	0.0	2.1	1	1	1	2	2	2	0	Picornavirus	2B	protein
zf-Mss51	PF13824.6	gi|289595727|ref|YP_003482423.1|	-	0.028	14.5	1.4	0.04	14.0	0.1	1.9	2	0	0	2	2	1	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
zf-RRN7	PF11781.8	gi|289595727|ref|YP_003482423.1|	-	0.06	13.0	0.9	0.097	12.4	0.9	1.3	1	0	0	1	1	1	0	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
YtxH	PF12732.7	gi|289595727|ref|YP_003482423.1|	-	0.075	13.6	0.1	1.8	9.1	0.0	2.2	2	0	0	2	2	2	0	YtxH-like	protein
RPA_interact_C	PF14768.6	gi|289595727|ref|YP_003482423.1|	-	0.076	13.6	0.1	0.12	13.0	0.1	1.4	1	0	0	1	1	1	0	Replication	protein	A	interacting	C-terminal
Nudix_N_2	PF14803.6	gi|289595727|ref|YP_003482423.1|	-	0.077	12.9	0.5	0.3	11.0	0.5	1.9	1	1	0	1	1	1	0	Nudix	N-terminal
Lar_restr_allev	PF14354.6	gi|289595727|ref|YP_003482423.1|	-	0.079	13.4	0.1	0.15	12.4	0.1	1.5	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
Ribosomal_L37ae	PF01780.19	gi|289595727|ref|YP_003482423.1|	-	0.085	13.0	0.6	0.15	12.1	0.6	1.4	1	0	0	1	1	1	0	Ribosomal	L37ae	protein	family
A2L_zn_ribbon	PF08792.10	gi|289595727|ref|YP_003482423.1|	-	0.22	11.3	2.1	0.64	9.8	2.1	1.8	1	0	0	1	1	1	0	A2L	zinc	ribbon	domain
DUF1178	PF06676.11	gi|289595727|ref|YP_003482423.1|	-	0.3	11.4	1.6	5.4	7.4	0.1	2.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1178)
C1_2	PF03107.16	gi|289595727|ref|YP_003482423.1|	-	0.77	10.1	2.4	1.2	9.5	2.4	1.3	1	0	0	1	1	1	0	C1	domain
zf-C2H2	PF00096.26	gi|289595727|ref|YP_003482423.1|	-	0.85	10.2	4.6	1.9	9.1	1.0	2.3	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
TFIIS_C	PF01096.18	gi|289595727|ref|YP_003482423.1|	-	1.5	8.7	3.1	65	3.5	3.1	2.3	1	1	0	1	1	1	0	Transcription	factor	S-II	(TFIIS)
Rad50_zn_hook	PF04423.14	gi|289595727|ref|YP_003482423.1|	-	1.9	8.4	9.3	0.28	11.0	1.1	2.8	3	0	0	3	3	3	0	Rad50	zinc	hook	motif
UPF0547	PF10571.9	gi|289595727|ref|YP_003482423.1|	-	3.1	8.0	4.6	19	5.5	4.6	2.0	1	1	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
zf-ribbon_3	PF13248.6	gi|289595727|ref|YP_003482423.1|	-	3.5	7.2	5.0	33	4.1	5.0	2.2	1	1	0	1	1	1	0	zinc-ribbon	domain
Rubredoxin_2	PF18073.1	gi|289595727|ref|YP_003482423.1|	-	7.6	6.4	7.5	1.9	8.3	2.0	2.2	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
Peptidase_M42	PF05343.14	gi|289595728|ref|YP_003482424.1|	-	0.089	11.8	0.0	0.11	11.5	0.0	1.1	1	0	0	1	1	1	0	M42	glutamyl	aminopeptidase
Arch_flagellin	PF01917.16	gi|289595729|ref|YP_003482425.1|	-	8.3e-20	71.6	3.8	1e-11	45.3	0.7	2.7	2	0	0	2	2	2	2	Archaebacterial	flagellin
SOR	PF07682.11	gi|289595729|ref|YP_003482425.1|	-	0.11	11.3	0.0	1.3	7.8	0.0	2.1	2	0	0	2	2	2	0	Sulphur	oxygenase	reductase
fn3	PF00041.21	gi|289595729|ref|YP_003482425.1|	-	4.3	7.7	7.3	2.8	8.3	0.3	2.8	3	0	0	3	3	3	0	Fibronectin	type	III	domain
2-Hacid_dh_C	PF02826.19	gi|289595730|ref|YP_003482426.1|	-	4e-65	218.5	0.0	9.6e-65	217.3	0.0	1.6	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.30	gi|289595730|ref|YP_003482426.1|	-	3.7e-36	123.7	0.0	4.2e-36	123.6	0.0	1.0	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
NAD_binding_2	PF03446.15	gi|289595730|ref|YP_003482426.1|	-	9.4e-06	25.9	0.0	1.6e-05	25.1	0.0	1.4	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
IlvN	PF07991.12	gi|289595730|ref|YP_003482426.1|	-	0.00016	21.3	0.1	0.0058	16.2	0.0	2.7	2	2	1	3	3	3	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
F420_oxidored	PF03807.17	gi|289595730|ref|YP_003482426.1|	-	0.00018	22.0	0.0	0.00047	20.7	0.0	1.8	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
AlaDh_PNT_C	PF01262.21	gi|289595730|ref|YP_003482426.1|	-	0.00028	20.2	0.0	0.00064	19.1	0.0	1.6	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
Sacchrp_dh_NADP	PF03435.18	gi|289595730|ref|YP_003482426.1|	-	0.0011	19.3	0.0	0.098	12.9	0.0	2.5	2	1	0	2	2	2	1	Saccharopine	dehydrogenase	NADP	binding	domain
Rossmann-like	PF10727.9	gi|289595730|ref|YP_003482426.1|	-	0.078	12.8	0.0	0.21	11.5	0.0	1.7	1	1	0	1	1	1	0	Rossmann-like	domain
DUF4405	PF14358.6	gi|289595731|ref|YP_003482427.1|	-	6e-11	42.7	3.7	7e-11	42.5	3.7	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4405)
Ferric_reduct	PF01794.19	gi|289595731|ref|YP_003482427.1|	-	0.0044	17.1	0.4	0.0049	17.0	0.4	1.1	1	0	0	1	1	1	1	Ferric	reductase	like	transmembrane	component
Ni_hydr_CYTB	PF01292.20	gi|289595731|ref|YP_003482427.1|	-	0.01	15.5	2.0	0.011	15.4	2.0	1.1	1	0	0	1	1	1	0	Prokaryotic	cytochrome	b561
DUF4079	PF13301.6	gi|289595731|ref|YP_003482427.1|	-	0.14	12.3	2.5	0.22	11.7	2.5	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4079)
tRNA-synt_His	PF13393.6	gi|289595732|ref|YP_003482428.1|	-	1.4e-52	178.9	0.0	1.8e-52	178.5	0.0	1.1	1	0	0	1	1	1	1	Histidyl-tRNA	synthetase
HGTP_anticodon	PF03129.20	gi|289595732|ref|YP_003482428.1|	-	4.7e-16	58.7	0.4	1e-15	57.6	0.4	1.6	1	0	0	1	1	1	1	Anticodon	binding	domain
tRNA-synt_2b	PF00587.25	gi|289595732|ref|YP_003482428.1|	-	2.1e-08	34.3	0.0	3.1e-08	33.8	0.0	1.4	1	1	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
DUF1951	PF09188.10	gi|289595732|ref|YP_003482428.1|	-	0.012	15.6	0.1	1.7	8.6	0.0	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1951)
tRNA-synt_2d	PF01409.20	gi|289595732|ref|YP_003482428.1|	-	0.023	14.2	0.0	0.066	12.7	0.0	1.8	2	0	0	2	2	2	0	tRNA	synthetases	class	II	core	domain	(F)
PolyA_pol_RNAbd	PF12627.7	gi|289595732|ref|YP_003482428.1|	-	0.07	12.9	0.2	0.19	11.5	0.1	1.8	1	1	0	1	1	1	0	Probable	RNA	and	SrmB-	binding	site	of	polymerase	A
tRNA-synt_2	PF00152.20	gi|289595732|ref|YP_003482428.1|	-	0.12	11.4	0.1	0.53	9.3	0.1	2.1	1	1	0	1	1	1	0	tRNA	synthetases	class	II	(D,	K	and	N)
MatE	PF01554.18	gi|289595733|ref|YP_003482429.1|	-	5e-57	192.1	39.0	2.4e-30	105.3	10.0	2.7	3	0	0	3	3	3	2	MatE
HisKA_7TM	PF16927.5	gi|289595734|ref|YP_003482430.1|	-	3.9e-18	66.3	28.4	4.9e-18	66.0	28.4	1.1	1	0	0	1	1	1	1	N-terminal	7TM	region	of	histidine	kinase
DUF835	PF05763.12	gi|289595734|ref|YP_003482430.1|	-	5.8e-06	26.1	0.1	1.1e-05	25.2	0.1	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF835)
Fer4	PF00037.27	gi|289595735|ref|YP_003482431.1|	-	2.2e-10	39.9	12.1	8.8e-07	28.5	2.0	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|289595735|ref|YP_003482431.1|	-	2.5e-08	34.4	8.6	3.8e-08	33.8	8.0	1.7	1	1	1	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|289595735|ref|YP_003482431.1|	-	6.9e-07	29.3	19.4	0.00012	22.1	11.1	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|289595735|ref|YP_003482431.1|	-	1.1e-06	28.7	7.4	2e-06	27.9	7.4	1.4	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|289595735|ref|YP_003482431.1|	-	4.2e-06	26.8	9.7	1.5e-05	25.0	10.1	1.6	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|289595735|ref|YP_003482431.1|	-	1.3e-05	26.0	7.8	0.0021	19.0	0.6	2.3	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_6	PF12837.7	gi|289595735|ref|YP_003482431.1|	-	5.7e-05	23.0	11.7	0.00029	20.8	1.2	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|289595735|ref|YP_003482431.1|	-	8.7e-05	22.4	11.2	0.011	15.8	1.7	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_15	PF13459.6	gi|289595735|ref|YP_003482431.1|	-	0.002	18.8	6.0	0.0042	17.8	0.2	2.2	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_17	PF13534.6	gi|289595735|ref|YP_003482431.1|	-	0.0036	17.8	11.6	0.047	14.2	11.6	2.0	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|289595735|ref|YP_003482431.1|	-	0.0039	17.7	8.7	0.28	11.8	1.6	2.2	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_4	PF12800.7	gi|289595735|ref|YP_003482431.1|	-	0.0065	16.9	12.5	0.12	13.0	2.2	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_22	PF17179.4	gi|289595735|ref|YP_003482431.1|	-	0.0082	17.0	4.2	0.52	11.2	0.8	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|289595735|ref|YP_003482431.1|	-	0.031	14.7	10.5	0.086	13.3	10.5	1.7	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
DUF3079	PF11278.8	gi|289595735|ref|YP_003482431.1|	-	0.04	13.7	1.1	0.04	13.7	1.1	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3079)
Fer4_18	PF13746.6	gi|289595735|ref|YP_003482431.1|	-	0.11	12.7	7.4	0.66	10.2	1.0	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
zf-FCS	PF06467.14	gi|289595735|ref|YP_003482431.1|	-	0.36	10.8	8.9	0.62	10.0	2.3	2.3	2	0	0	2	2	2	0	MYM-type	Zinc	finger	with	FCS	sequence	motif
Fer4_3	PF12798.7	gi|289595735|ref|YP_003482431.1|	-	0.97	10.5	14.3	4.8	8.4	3.3	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
POR_N	PF01855.19	gi|289595736|ref|YP_003482432.1|	-	1.5e-71	240.8	0.1	2.2e-71	240.3	0.1	1.2	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
PFOR_II	PF17147.4	gi|289595736|ref|YP_003482432.1|	-	7.8e-20	71.1	0.1	1.3e-19	70.4	0.1	1.4	1	0	0	1	1	1	1	Pyruvate:ferredoxin	oxidoreductase	core	domain	II
Transketolase_C	PF02780.20	gi|289595736|ref|YP_003482432.1|	-	4.8e-05	23.2	0.0	0.0001	22.2	0.0	1.6	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
TPP_enzyme_N	PF02776.18	gi|289595736|ref|YP_003482432.1|	-	0.018	14.7	0.1	0.059	13.0	0.1	1.9	2	1	0	2	2	2	0	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.21	gi|289595737|ref|YP_003482433.1|	-	2.7e-36	124.6	0.1	4.1e-36	124.1	0.1	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
POR	PF01558.18	gi|289595738|ref|YP_003482434.1|	-	5e-40	137.4	0.2	5.9e-40	137.2	0.2	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
SHMT	PF00464.19	gi|289595739|ref|YP_003482435.1|	-	2.8e-80	269.9	0.0	3.5e-80	269.5	0.0	1.0	1	0	0	1	1	1	1	Serine	hydroxymethyltransferase
Aminotran_1_2	PF00155.21	gi|289595739|ref|YP_003482435.1|	-	1.1e-07	31.3	0.0	5.9e-07	29.0	0.0	1.9	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
SelA	PF03841.13	gi|289595739|ref|YP_003482435.1|	-	0.059	12.4	0.0	0.078	11.9	0.0	1.3	1	0	0	1	1	1	0	L-seryl-tRNA	selenium	transferase
DUF4157	PF13699.6	gi|289595739|ref|YP_003482435.1|	-	0.075	13.3	0.4	0.39	11.0	0.4	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4157)
DDE_Tnp_IS1	PF03400.13	gi|289595739|ref|YP_003482435.1|	-	0.14	12.5	0.0	2	8.8	0.0	2.2	2	0	0	2	2	2	0	IS1	transposase
DJ-1_PfpI	PF01965.24	gi|289595740|ref|YP_003482436.1|	-	1.4e-50	171.4	0.0	1.5e-50	171.2	0.0	1.0	1	0	0	1	1	1	1	DJ-1/PfpI	family
GATase_5	PF13507.6	gi|289595740|ref|YP_003482436.1|	-	0.0014	17.8	0.0	0.0091	15.1	0.0	1.9	1	1	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
GATase	PF00117.28	gi|289595740|ref|YP_003482436.1|	-	0.0015	18.3	0.0	0.0016	18.2	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
GATase_3	PF07685.14	gi|289595740|ref|YP_003482436.1|	-	0.0051	16.4	0.0	0.0064	16.1	0.0	1.2	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
ThiJ_like	PF17124.5	gi|289595740|ref|YP_003482436.1|	-	0.027	14.2	0.0	0.16	11.6	0.0	2.0	1	1	1	2	2	2	0	ThiJ/PfpI	family-like
SNO	PF01174.19	gi|289595740|ref|YP_003482436.1|	-	0.046	13.6	0.0	0.086	12.7	0.0	1.5	2	0	0	2	2	2	0	SNO	glutamine	amidotransferase	family
Met_gamma_lyase	PF06838.11	gi|289595740|ref|YP_003482436.1|	-	0.064	11.8	0.0	0.085	11.4	0.0	1.1	1	0	0	1	1	1	0	Methionine	gamma-lyase
Catalase_C	PF18011.1	gi|289595740|ref|YP_003482436.1|	-	0.13	11.9	0.0	0.2	11.3	0.0	1.4	1	0	0	1	1	1	0	C-terminal	domain	found	in	long	catalases
ThuA	PF06283.11	gi|289595741|ref|YP_003482437.1|	-	8.1e-06	26.2	0.0	1.7e-05	25.2	0.0	1.4	2	0	0	2	2	2	1	Trehalose	utilisation
BPL_N	PF09825.9	gi|289595741|ref|YP_003482437.1|	-	1.4e-05	24.3	0.0	0.00016	20.9	0.0	2.0	2	0	0	2	2	2	1	Biotin-protein	ligase,	N	terminal
Peptidase_S51	PF03575.17	gi|289595741|ref|YP_003482437.1|	-	0.026	14.2	0.0	0.04	13.6	0.0	1.2	1	0	0	1	1	1	0	Peptidase	family	S51
Molybdopterin	PF00384.22	gi|289595742|ref|YP_003482438.1|	-	9.1e-43	146.8	0.0	4.4e-42	144.5	0.0	1.8	1	1	0	1	1	1	1	Molybdopterin	oxidoreductase
Molydop_binding	PF01568.21	gi|289595742|ref|YP_003482438.1|	-	2.6e-18	66.0	0.0	6.8e-18	64.7	0.0	1.7	2	0	0	2	2	2	1	Molydopterin	dinucleotide	binding	domain
Molybdop_Fe4S4	PF04879.16	gi|289595742|ref|YP_003482438.1|	-	9.7e-05	22.3	0.1	0.00021	21.2	0.1	1.5	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase	Fe4S4	domain
JmjN	PF02375.17	gi|289595742|ref|YP_003482438.1|	-	0.69	9.9	3.4	3	7.9	0.1	3.2	3	0	0	3	3	3	0	jmjN	domain
Radical_SAM	PF04055.21	gi|289595743|ref|YP_003482439.1|	-	9.2e-15	55.4	0.0	2.8e-14	53.8	0.0	1.8	2	0	0	2	2	2	1	Radical	SAM	superfamily
TrmB	PF01978.19	gi|289595744|ref|YP_003482440.1|	-	5.6e-05	22.9	0.0	0.00014	21.6	0.0	1.7	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
YliH	PF10799.8	gi|289595744|ref|YP_003482440.1|	-	0.03	14.2	0.3	0.09	12.7	0.2	1.8	1	1	1	2	2	2	0	Biofilm	formation	protein	(YliH/bssR)
MarR_2	PF12802.7	gi|289595744|ref|YP_003482440.1|	-	0.14	12.1	0.0	0.29	11.1	0.0	1.5	1	0	0	1	1	1	0	MarR	family
Dimerisation2	PF16864.5	gi|289595744|ref|YP_003482440.1|	-	0.17	11.9	0.0	0.7	9.9	0.0	1.9	2	0	0	2	2	2	0	Dimerisation	domain
Ribosomal_L16	PF00252.18	gi|289595745|ref|YP_003482441.1|	-	1.2e-37	128.8	0.1	1.4e-37	128.6	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L16p/L10e
DUF835	PF05763.12	gi|289595746|ref|YP_003482442.1|	-	7.2e-39	132.6	0.9	9.9e-39	132.2	0.9	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF835)
SYF2	PF08231.12	gi|289595746|ref|YP_003482442.1|	-	0.022	15.1	0.6	0.035	14.5	0.6	1.3	1	0	0	1	1	1	0	SYF2	splicing	factor
Mo25	PF08569.11	gi|289595746|ref|YP_003482442.1|	-	0.029	13.7	0.5	2.5	7.4	0.1	2.1	2	0	0	2	2	2	0	Mo25-like
BESS	PF02944.20	gi|289595746|ref|YP_003482442.1|	-	0.065	13.1	0.2	0.4	10.5	0.0	2.4	2	0	0	2	2	2	0	BESS	motif
Methyltr_RsmB-F	PF01189.17	gi|289595747|ref|YP_003482443.1|	-	5.4e-27	94.7	0.0	9.1e-27	94.0	0.0	1.3	1	0	0	1	1	1	1	16S	rRNA	methyltransferase	RsmB/F
MTS	PF05175.14	gi|289595747|ref|YP_003482443.1|	-	1.5e-07	31.1	0.0	5.9e-07	29.2	0.0	1.9	1	1	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.6	gi|289595747|ref|YP_003482443.1|	-	9.3e-06	25.5	0.0	3.2e-05	23.8	0.0	1.9	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.10	gi|289595747|ref|YP_003482443.1|	-	0.0016	18.1	0.0	0.0046	16.6	0.0	1.7	1	1	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_25	PF13649.6	gi|289595747|ref|YP_003482443.1|	-	0.0016	19.1	0.0	0.0072	17.0	0.0	2.1	1	1	0	2	2	2	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|289595747|ref|YP_003482443.1|	-	0.0092	15.3	0.0	0.022	14.1	0.0	1.6	2	0	0	2	2	2	1	ubiE/COQ5	methyltransferase	family
Methyltransf_32	PF13679.6	gi|289595747|ref|YP_003482443.1|	-	0.059	13.4	0.1	0.14	12.2	0.0	1.6	1	1	0	1	1	1	0	Methyltransferase	domain
3HCDH_N	PF02737.18	gi|289595747|ref|YP_003482443.1|	-	0.12	12.3	0.2	1.2	9.0	0.0	2.4	3	0	0	3	3	3	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
PrmA	PF06325.13	gi|289595747|ref|YP_003482443.1|	-	0.12	11.7	0.0	0.29	10.5	0.0	1.6	2	0	0	2	2	2	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
GA-like	PF17573.2	gi|289595747|ref|YP_003482443.1|	-	0.18	11.7	1.2	0.93	9.5	0.1	2.3	2	0	0	2	2	2	0	GA-like	domain
Ribosom_S12_S23	PF00164.25	gi|289595748|ref|YP_003482444.1|	-	5.9e-51	170.9	1.6	7.2e-51	170.6	1.6	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S12/S23
Ribosomal_S7	PF00177.21	gi|289595749|ref|YP_003482445.1|	-	1e-40	138.8	6.5	1.2e-40	138.5	6.5	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S7p/S5e
RNAse_A_bac	PF18431.1	gi|289595749|ref|YP_003482445.1|	-	0.028	15.4	3.1	0.55	11.2	0.3	2.1	1	1	1	2	2	2	0	Bacterial	CdiA-CT	RNAse	A	domain
DUF1722	PF08349.11	gi|289595749|ref|YP_003482445.1|	-	0.088	13.1	0.4	0.14	12.4	0.4	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1722)
GTP_EFTU	PF00009.27	gi|289595750|ref|YP_003482446.1|	-	3.1e-64	216.1	0.1	5e-64	215.4	0.1	1.3	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
EFG_IV	PF03764.18	gi|289595750|ref|YP_003482446.1|	-	3.8e-25	88.0	0.0	1.1e-24	86.5	0.0	1.9	1	0	0	1	1	1	1	Elongation	factor	G,	domain	IV
EFG_C	PF00679.24	gi|289595750|ref|YP_003482446.1|	-	2.5e-24	85.1	0.1	1.1e-23	83.1	0.1	2.2	2	0	0	2	2	2	1	Elongation	factor	G	C-terminus
EFG_II	PF14492.6	gi|289595750|ref|YP_003482446.1|	-	2.6e-24	85.1	0.3	8.4e-24	83.5	0.2	2.0	2	0	0	2	2	2	1	Elongation	Factor	G,	domain	II
GTP_EFTU_D2	PF03144.25	gi|289595750|ref|YP_003482446.1|	-	3.9e-16	59.2	1.3	7.8e-16	58.2	0.1	2.2	3	0	0	3	3	3	1	Elongation	factor	Tu	domain	2
tRNA_bind_2	PF13725.6	gi|289595750|ref|YP_003482446.1|	-	0.00061	19.6	0.0	0.0011	18.7	0.0	1.4	1	0	0	1	1	1	1	Possible	tRNA	binding	domain
RF3_C	PF16658.5	gi|289595750|ref|YP_003482446.1|	-	0.0011	18.8	0.0	0.003	17.4	0.0	1.7	1	0	0	1	1	1	1	Class	II	release	factor	RF3,	C-terminal	domain
MMR_HSR1	PF01926.23	gi|289595750|ref|YP_003482446.1|	-	0.0091	16.1	0.0	0.023	14.8	0.0	1.7	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
DUF2283	PF10049.9	gi|289595750|ref|YP_003482446.1|	-	0.15	12.3	0.3	0.91	9.8	0.0	2.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2283)
RsgA_GTPase	PF03193.16	gi|289595750|ref|YP_003482446.1|	-	0.17	11.8	0.2	0.58	10.0	0.1	1.9	2	0	0	2	2	2	0	RsgA	GTPase
GTP_EFTU	PF00009.27	gi|289595751|ref|YP_003482447.1|	-	7.1e-59	198.6	0.0	9.1e-59	198.3	0.0	1.1	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D3	PF03143.17	gi|289595751|ref|YP_003482447.1|	-	3.8e-36	123.8	0.3	1.3e-35	122.1	0.0	2.0	2	0	0	2	2	2	1	Elongation	factor	Tu	C-terminal	domain
GTP_EFTU_D2	PF03144.25	gi|289595751|ref|YP_003482447.1|	-	4e-23	81.6	2.2	3.2e-20	72.3	0.6	2.6	2	0	0	2	2	2	2	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.23	gi|289595751|ref|YP_003482447.1|	-	4.8e-07	29.9	0.0	0.00031	20.8	0.0	2.4	2	0	0	2	2	2	2	50S	ribosome-binding	GTPase
GTP_EFTU_D4	PF14578.6	gi|289595751|ref|YP_003482447.1|	-	0.00037	20.4	0.6	0.00089	19.1	0.6	1.6	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	4
Gtr1_RagA	PF04670.12	gi|289595751|ref|YP_003482447.1|	-	0.0022	17.4	0.0	0.044	13.1	0.0	2.1	1	1	0	1	1	1	1	Gtr1/RagA	G	protein	conserved	region
Ras	PF00071.22	gi|289595751|ref|YP_003482447.1|	-	0.0034	17.0	0.1	0.011	15.4	0.0	1.8	2	0	0	2	2	2	1	Ras	family
Roc	PF08477.13	gi|289595751|ref|YP_003482447.1|	-	0.026	14.8	0.0	1.4	9.2	0.0	2.3	2	0	0	2	2	2	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
SRPRB	PF09439.10	gi|289595751|ref|YP_003482447.1|	-	0.078	12.4	0.0	0.98	8.8	0.0	2.4	1	1	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
FeoB_N	PF02421.18	gi|289595751|ref|YP_003482447.1|	-	0.084	12.4	0.1	0.73	9.4	0.0	2.4	2	1	0	2	2	2	0	Ferrous	iron	transport	protein	B
Arf	PF00025.21	gi|289595751|ref|YP_003482447.1|	-	0.086	12.3	0.1	29	4.0	0.0	3.2	1	1	1	3	3	3	0	ADP-ribosylation	factor	family
AP_endonuc_2	PF01261.24	gi|289595751|ref|YP_003482447.1|	-	0.09	12.2	0.0	0.14	11.6	0.0	1.4	1	0	0	1	1	1	0	Xylose	isomerase-like	TIM	barrel
G-alpha	PF00503.20	gi|289595751|ref|YP_003482447.1|	-	0.13	11.3	0.0	8.8	5.4	0.0	2.1	1	1	0	2	2	2	0	G-protein	alpha	subunit
Ribosomal_S10	PF00338.22	gi|289595752|ref|YP_003482448.1|	-	1.8e-29	101.9	0.0	2e-29	101.7	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S10p/S20e
PriA_C	PF18074.1	gi|289595752|ref|YP_003482448.1|	-	0.00025	21.8	0.0	0.00053	20.8	0.0	1.5	2	0	0	2	2	2	1	Primosomal	protein	N	C-terminal	domain
DisA_N	PF02457.16	gi|289595753|ref|YP_003482449.1|	-	6.1e-17	61.3	0.1	1.1e-16	60.4	0.1	1.4	1	0	0	1	1	1	1	DisA	bacterial	checkpoint	controller	nucleotide-binding
Peptidase_M54	PF07998.11	gi|289595753|ref|YP_003482449.1|	-	0.018	15.0	0.1	0.026	14.5	0.1	1.2	1	0	0	1	1	1	0	Peptidase	family	M54
Translin	PF01997.16	gi|289595754|ref|YP_003482450.1|	-	1.7e-09	38.0	2.2	1.1e-07	32.1	2.2	2.1	1	1	0	1	1	1	1	Translin	family
PYRIN	PF02758.16	gi|289595754|ref|YP_003482450.1|	-	0.099	12.8	1.7	0.19	11.9	0.6	2.0	2	0	0	2	2	2	0	PAAD/DAPIN/Pyrin	domain
PhoU	PF01895.19	gi|289595754|ref|YP_003482450.1|	-	0.69	10.4	6.1	0.15	12.6	0.6	2.6	2	2	0	2	2	2	0	PhoU	domain
Prok-JAB	PF14464.6	gi|289595755|ref|YP_003482451.1|	-	1.2e-10	41.2	0.0	2.4e-10	40.2	0.0	1.5	1	1	0	1	1	1	1	Prokaryotic	homologs	of	the	JAB	domain
RadC	PF04002.15	gi|289595755|ref|YP_003482451.1|	-	0.0015	18.4	0.0	0.0026	17.7	0.0	1.6	1	1	0	1	1	1	1	RadC-like	JAB	domain
NAD_kinase	PF01513.21	gi|289595756|ref|YP_003482452.1|	-	6.4e-52	176.6	0.0	3e-51	174.4	0.0	1.7	1	1	0	2	2	2	1	ATP-NAD	kinase
DAGK_cat	PF00781.24	gi|289595756|ref|YP_003482452.1|	-	0.022	14.4	0.1	0.038	13.6	0.1	1.4	1	0	0	1	1	1	0	Diacylglycerol	kinase	catalytic	domain
Inositol_P	PF00459.25	gi|289595757|ref|YP_003482453.1|	-	8.9e-30	104.1	0.0	1.1e-29	103.8	0.0	1.1	1	0	0	1	1	1	1	Inositol	monophosphatase	family
SpoVIF	PF14069.6	gi|289595757|ref|YP_003482453.1|	-	0.083	12.7	0.9	0.3	10.9	0.2	2.2	2	0	0	2	2	2	0	Stage	VI	sporulation	protein	F
FBPase	PF00316.20	gi|289595757|ref|YP_003482453.1|	-	0.1	12.1	0.0	0.17	11.3	0.0	1.4	1	0	0	1	1	1	0	Fructose-1-6-bisphosphatase,	N-terminal	domain
NiFeSe_Hases	PF00374.19	gi|289595758|ref|YP_003482454.1|	-	1.5e-38	133.0	0.6	3.9e-21	75.5	0.0	2.9	1	1	2	3	3	3	2	Nickel-dependent	hydrogenase
TPR_14	PF13428.6	gi|289595758|ref|YP_003482454.1|	-	0.033	15.0	0.2	0.083	13.7	0.2	1.6	1	0	0	1	1	1	0	Tetratricopeptide	repeat
Oxidored_q6	PF01058.22	gi|289595759|ref|YP_003482455.1|	-	1.5e-20	73.3	0.0	2.3e-20	72.8	0.0	1.3	1	0	0	1	1	1	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
CMD	PF02627.20	gi|289595759|ref|YP_003482455.1|	-	0.0072	16.4	0.0	0.31	11.1	0.0	3.2	3	1	1	4	4	4	1	Carboxymuconolactone	decarboxylase	family
UBA	PF00627.31	gi|289595759|ref|YP_003482455.1|	-	0.018	14.9	0.0	0.11	12.4	0.0	2.1	2	0	0	2	2	2	0	UBA/TS-N	domain
UBA_2	PF08587.11	gi|289595759|ref|YP_003482455.1|	-	0.048	13.8	1.4	1.8	8.7	0.0	3.1	3	0	0	3	3	3	0	Ubiquitin	associated	domain	(UBA)
mTERF	PF02536.14	gi|289595759|ref|YP_003482455.1|	-	0.058	12.3	0.1	1.9	7.3	0.0	2.6	3	0	0	3	3	3	0	mTERF
NAD_binding_1	PF00175.21	gi|289595760|ref|YP_003482456.1|	-	7.3e-14	52.3	0.0	1.1e-13	51.7	0.0	1.3	1	0	0	1	1	1	1	Oxidoreductase	NAD-binding	domain
DHODB_Fe-S_bind	PF10418.9	gi|289595760|ref|YP_003482456.1|	-	9.6e-09	34.9	5.2	2.2e-08	33.8	5.2	1.6	1	0	0	1	1	1	1	Iron-sulfur	cluster	binding	domain	of	dihydroorotate	dehydrogenase	B
FAD_binding_6	PF00970.24	gi|289595760|ref|YP_003482456.1|	-	0.0005	20.4	0.0	0.0011	19.2	0.0	1.6	1	0	0	1	1	1	1	Oxidoreductase	FAD-binding	domain
NAD_binding_6	PF08030.12	gi|289595760|ref|YP_003482456.1|	-	0.086	13.0	0.0	0.77	9.9	0.0	2.1	2	0	0	2	2	2	0	Ferric	reductase	NAD	binding	domain
Fer4_22	PF17179.4	gi|289595761|ref|YP_003482457.1|	-	5.7e-29	100.8	11.4	5.7e-29	100.8	11.4	2.2	3	0	0	3	3	2	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|289595761|ref|YP_003482457.1|	-	3.5e-08	33.8	12.9	1.3e-07	32.0	10.3	2.7	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|289595761|ref|YP_003482457.1|	-	1.2e-05	25.2	12.0	0.0067	16.5	3.6	2.8	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|289595761|ref|YP_003482457.1|	-	0.00016	21.8	14.9	0.0016	18.6	0.3	2.6	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|289595761|ref|YP_003482457.1|	-	0.0003	20.8	15.4	0.0033	17.5	15.5	2.4	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|289595761|ref|YP_003482457.1|	-	0.0065	17.0	16.9	0.056	14.0	1.6	3.4	2	2	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|289595761|ref|YP_003482457.1|	-	0.011	15.5	18.5	0.29	11.0	6.1	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|289595761|ref|YP_003482457.1|	-	0.017	15.7	18.2	0.026	15.1	15.0	2.7	2	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|289595761|ref|YP_003482457.1|	-	0.019	15.0	22.5	0.027	14.5	4.4	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|289595761|ref|YP_003482457.1|	-	0.031	14.8	4.3	0.031	14.8	4.3	3.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|289595761|ref|YP_003482457.1|	-	0.2	11.8	16.1	2	8.6	1.0	2.4	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|289595761|ref|YP_003482457.1|	-	0.23	12.2	8.5	12	6.7	1.6	3.4	3	0	0	3	3	3	0	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.6	gi|289595761|ref|YP_003482457.1|	-	0.61	10.3	14.9	0.66	10.2	1.4	2.4	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|289595761|ref|YP_003482457.1|	-	1.4	9.9	22.7	2.8	8.9	4.1	3.1	1	1	2	3	3	3	0	4Fe-4S	double	cluster	binding	domain
Fer4_3	PF12798.7	gi|289595761|ref|YP_003482457.1|	-	2.9	9.0	18.2	1.4	10.0	4.5	3.3	2	1	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_20	PF14691.6	gi|289595762|ref|YP_003482458.1|	-	4.7e-43	145.5	0.4	7.4e-43	144.9	0.4	1.3	1	0	0	1	1	1	1	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Pyr_redox_2	PF07992.14	gi|289595762|ref|YP_003482458.1|	-	1.3e-37	129.6	0.1	1.9e-37	129.1	0.1	1.2	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|289595762|ref|YP_003482458.1|	-	2.4e-10	40.8	1.1	0.00041	20.9	0.1	3.0	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|289595762|ref|YP_003482458.1|	-	3.6e-09	36.3	0.1	0.011	15.0	0.0	3.3	3	1	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.6	gi|289595762|ref|YP_003482458.1|	-	3.2e-08	33.7	0.1	1.1e-07	32.0	0.0	1.9	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
NAD_binding_7	PF13241.6	gi|289595762|ref|YP_003482458.1|	-	3.8e-05	24.1	0.3	0.27	11.7	0.0	2.7	2	1	0	2	2	2	2	Putative	NAD(P)-binding
AlaDh_PNT_C	PF01262.21	gi|289595762|ref|YP_003482458.1|	-	4.7e-05	22.8	0.0	0.22	10.8	0.0	2.4	2	0	0	2	2	2	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
2-Hacid_dh_C	PF02826.19	gi|289595762|ref|YP_003482458.1|	-	8.4e-05	22.0	0.5	0.46	9.8	0.0	2.6	3	0	0	3	3	3	2	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Amino_oxidase	PF01593.24	gi|289595762|ref|YP_003482458.1|	-	0.00014	21.3	0.0	0.0011	18.4	0.0	2.1	2	0	0	2	2	2	1	Flavin	containing	amine	oxidoreductase
Shikimate_DH	PF01488.20	gi|289595762|ref|YP_003482458.1|	-	0.00056	20.0	0.1	0.9	9.6	0.1	3.4	3	0	0	3	3	3	1	Shikimate	/	quinate	5-dehydrogenase
FMO-like	PF00743.19	gi|289595762|ref|YP_003482458.1|	-	0.00076	18.0	0.0	0.35	9.2	0.0	2.2	2	0	0	2	2	2	2	Flavin-binding	monooxygenase-like
FAD_binding_3	PF01494.19	gi|289595762|ref|YP_003482458.1|	-	0.0011	18.3	0.0	0.0022	17.3	0.0	1.4	1	0	0	1	1	1	1	FAD	binding	domain
F420_oxidored	PF03807.17	gi|289595762|ref|YP_003482458.1|	-	0.0012	19.4	0.0	0.3	11.7	0.0	3.0	3	0	0	3	3	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
Thi4	PF01946.17	gi|289595762|ref|YP_003482458.1|	-	0.0012	18.1	0.8	0.0016	17.7	0.0	1.5	2	0	0	2	2	1	1	Thi4	family
DAO	PF01266.24	gi|289595762|ref|YP_003482458.1|	-	0.0016	18.1	0.5	0.018	14.7	0.1	2.4	2	1	0	2	2	2	1	FAD	dependent	oxidoreductase
HI0933_like	PF03486.14	gi|289595762|ref|YP_003482458.1|	-	0.0017	17.1	1.0	0.0019	17.0	0.1	1.5	2	0	0	2	2	2	1	HI0933-like	protein
FAD_binding_2	PF00890.24	gi|289595762|ref|YP_003482458.1|	-	0.0043	16.2	0.1	0.012	14.8	0.1	1.7	2	0	0	2	2	2	1	FAD	binding	domain
FAD_oxidored	PF12831.7	gi|289595762|ref|YP_003482458.1|	-	0.0094	15.3	0.2	0.026	13.9	0.0	1.8	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
IlvN	PF07991.12	gi|289595762|ref|YP_003482458.1|	-	0.015	14.8	0.0	0.97	9.0	0.0	2.3	2	0	0	2	2	2	0	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
3HCDH_N	PF02737.18	gi|289595762|ref|YP_003482458.1|	-	0.024	14.5	0.1	3.4	7.5	0.0	2.4	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_9	PF13454.6	gi|289595762|ref|YP_003482458.1|	-	0.029	14.4	0.4	0.11	12.5	0.1	2.1	2	0	0	2	2	2	0	FAD-NAD(P)-binding
GIDA	PF01134.22	gi|289595762|ref|YP_003482458.1|	-	0.036	13.2	0.1	0.23	10.5	0.0	2.1	2	0	0	2	2	2	0	Glucose	inhibited	division	protein	A
XdhC_C	PF13478.6	gi|289595762|ref|YP_003482458.1|	-	0.055	14.0	0.1	2.7	8.5	0.0	2.8	4	0	0	4	4	2	0	XdhC	Rossmann	domain
Fer4_9	PF13187.6	gi|289595762|ref|YP_003482458.1|	-	0.072	13.3	1.9	0.25	11.5	2.1	1.8	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
K_oxygenase	PF13434.6	gi|289595762|ref|YP_003482458.1|	-	0.074	12.2	0.0	3.2	6.8	0.0	2.4	2	0	0	2	2	2	0	L-lysine	6-monooxygenase	(NADPH-requiring)
Fer4_17	PF13534.6	gi|289595762|ref|YP_003482458.1|	-	0.16	12.5	3.0	0.34	11.5	3.0	1.6	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
DHODB_Fe-S_bind	PF10418.9	gi|289595763|ref|YP_003482459.1|	-	5.4e-13	48.5	3.0	1.1e-12	47.5	3.0	1.6	1	0	0	1	1	1	1	Iron-sulfur	cluster	binding	domain	of	dihydroorotate	dehydrogenase	B
DUF3578	PF12102.8	gi|289595763|ref|YP_003482459.1|	-	0.026	14.1	0.0	0.048	13.2	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3578)
Fer2_3	PF13085.6	gi|289595763|ref|YP_003482459.1|	-	0.052	13.6	0.0	0.088	12.8	0.0	1.4	1	0	0	1	1	1	0	2Fe-2S	iron-sulfur	cluster	binding	domain
NAD_binding_1	PF00175.21	gi|289595763|ref|YP_003482459.1|	-	0.054	14.1	0.0	0.13	12.9	0.0	1.7	1	1	0	1	1	1	0	Oxidoreductase	NAD-binding	domain
GCD14	PF08704.10	gi|289595763|ref|YP_003482459.1|	-	0.21	11.2	0.1	0.36	10.5	0.1	1.3	1	0	0	1	1	1	0	tRNA	methyltransferase	complex	GCD14	subunit
DAO	PF01266.24	gi|289595764|ref|YP_003482460.1|	-	2e-65	221.7	0.0	2.3e-65	221.5	0.0	1.0	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.24	gi|289595764|ref|YP_003482460.1|	-	2e-07	30.5	0.5	4e-06	26.2	0.5	2.1	1	1	0	1	1	1	1	FAD	binding	domain
Pyr_redox_2	PF07992.14	gi|289595764|ref|YP_003482460.1|	-	2.2e-07	30.4	0.1	0.01	15.1	0.0	2.2	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|289595764|ref|YP_003482460.1|	-	7.6e-07	28.7	1.4	0.02	14.2	0.3	2.2	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.6	gi|289595764|ref|YP_003482460.1|	-	2.5e-06	27.6	0.7	1.6e-05	25.0	0.3	2.3	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox	PF00070.27	gi|289595764|ref|YP_003482460.1|	-	4.7e-05	23.9	1.6	0.24	12.0	0.1	2.5	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.14	gi|289595764|ref|YP_003482460.1|	-	0.00027	19.8	0.4	0.3	9.7	0.2	2.1	2	0	0	2	2	2	2	HI0933-like	protein
Thi4	PF01946.17	gi|289595764|ref|YP_003482460.1|	-	0.00027	20.3	1.2	0.054	12.7	0.1	2.2	2	0	0	2	2	2	2	Thi4	family
FAD_binding_3	PF01494.19	gi|289595764|ref|YP_003482460.1|	-	0.0017	17.7	0.1	0.0032	16.7	0.1	1.4	1	0	0	1	1	1	1	FAD	binding	domain
ApbA	PF02558.16	gi|289595764|ref|YP_003482460.1|	-	0.055	13.1	1.9	0.28	10.8	0.7	2.2	2	0	0	2	2	2	0	Ketopantoate	reductase	PanE/ApbA
NAD_binding_9	PF13454.6	gi|289595764|ref|YP_003482460.1|	-	0.056	13.4	0.8	0.11	12.5	0.1	1.8	2	0	0	2	2	2	0	FAD-NAD(P)-binding
GIDA	PF01134.22	gi|289595764|ref|YP_003482460.1|	-	0.066	12.3	0.8	3.2	6.7	0.2	2.4	2	0	0	2	2	2	0	Glucose	inhibited	division	protein	A
FAD_oxidored	PF12831.7	gi|289595764|ref|YP_003482460.1|	-	0.18	11.1	0.1	3.1	7.1	0.0	2.0	2	0	0	2	2	2	0	FAD	dependent	oxidoreductase
SO_alpha_A3	PF17806.1	gi|289595765|ref|YP_003482461.1|	-	3.8e-17	62.4	0.0	4.1e-17	62.3	0.0	1.0	1	0	0	1	1	1	1	Sarcosine	oxidase	A3	domain
Fer2_BFD	PF04324.15	gi|289595765|ref|YP_003482461.1|	-	6.9e-15	55.1	2.3	1e-14	54.6	2.3	1.3	1	0	0	1	1	1	1	BFD-like	[2Fe-2S]	binding	domain
Fer4_7	PF12838.7	gi|289595766|ref|YP_003482462.1|	-	5.7e-09	36.4	17.1	1.3e-06	28.8	8.5	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|289595766|ref|YP_003482462.1|	-	1.5e-07	31.0	17.3	2.6e-07	30.2	1.9	2.7	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|289595766|ref|YP_003482462.1|	-	1.5e-06	28.0	14.7	1.9e-05	24.5	1.9	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|289595766|ref|YP_003482462.1|	-	8.6e-06	25.8	13.4	2.2e-05	24.5	13.5	1.7	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|289595766|ref|YP_003482462.1|	-	8.9e-06	25.8	8.9	1.7e-05	24.9	8.9	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|289595766|ref|YP_003482462.1|	-	1.1e-05	25.4	13.7	2e-05	24.6	13.7	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|289595766|ref|YP_003482462.1|	-	5.1e-05	23.1	4.5	5.1e-05	23.1	4.5	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|289595766|ref|YP_003482462.1|	-	0.00012	22.5	1.0	0.011	16.2	0.0	2.3	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|289595766|ref|YP_003482462.1|	-	0.00056	20.4	7.7	0.00058	20.4	0.1	2.5	2	1	0	2	2	2	1	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_3	PF12798.7	gi|289595766|ref|YP_003482462.1|	-	0.00059	20.6	13.9	0.0037	18.1	4.1	2.6	2	1	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_15	PF13459.6	gi|289595766|ref|YP_003482462.1|	-	0.00068	20.3	0.4	0.00068	20.3	0.4	2.7	3	1	0	3	3	2	1	4Fe-4S	single	cluster	domain
Fer4_16	PF13484.6	gi|289595766|ref|YP_003482462.1|	-	0.00099	20.0	12.3	0.23	12.4	4.5	2.5	1	1	2	3	3	3	3	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.7	gi|289595766|ref|YP_003482462.1|	-	0.0016	18.8	0.7	0.0016	18.8	0.7	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|289595766|ref|YP_003482462.1|	-	0.061	13.9	1.2	0.061	13.9	1.2	2.4	1	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|289595766|ref|YP_003482462.1|	-	2.4	8.4	10.2	1.1	9.5	2.3	2.2	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Pyr_redox_2	PF07992.14	gi|289595767|ref|YP_003482463.1|	-	8.6e-39	133.5	8.7	1.2e-38	133.1	8.7	1.2	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Fer2_4	PF13510.6	gi|289595767|ref|YP_003482463.1|	-	4.8e-27	93.8	0.0	1.1e-26	92.7	0.0	1.6	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
DAO	PF01266.24	gi|289595767|ref|YP_003482463.1|	-	4.8e-15	56.0	9.0	3.8e-05	23.4	0.7	3.3	3	0	0	3	3	3	3	FAD	dependent	oxidoreductase
Pyr_redox_3	PF13738.6	gi|289595767|ref|YP_003482463.1|	-	5.2e-15	55.5	10.1	2e-11	43.7	0.6	2.4	1	1	1	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|289595767|ref|YP_003482463.1|	-	5.4e-15	55.7	10.3	1.9e-07	31.5	0.9	4.1	3	1	1	4	4	4	3	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.14	gi|289595767|ref|YP_003482463.1|	-	5.7e-14	51.6	13.8	8.6e-08	31.3	1.7	3.2	3	0	0	3	3	3	3	HI0933-like	protein
FAD_binding_2	PF00890.24	gi|289595767|ref|YP_003482463.1|	-	7e-14	51.7	15.9	3.8e-08	32.8	0.9	3.7	2	2	1	4	4	4	3	FAD	binding	domain
FAD_oxidored	PF12831.7	gi|289595767|ref|YP_003482463.1|	-	1.7e-13	50.8	9.6	1.2e-11	44.7	0.4	2.9	2	1	1	3	3	3	2	FAD	dependent	oxidoreductase
GIDA	PF01134.22	gi|289595767|ref|YP_003482463.1|	-	2.2e-09	36.9	14.5	0.00012	21.4	0.8	4.1	3	1	0	4	4	4	3	Glucose	inhibited	division	protein	A
NAD_binding_8	PF13450.6	gi|289595767|ref|YP_003482463.1|	-	5.1e-09	36.2	6.2	0.00023	21.3	0.1	3.4	3	0	0	3	3	2	2	NAD(P)-binding	Rossmann-like	domain
FAD_binding_3	PF01494.19	gi|289595767|ref|YP_003482463.1|	-	7.7e-09	35.3	6.8	0.00096	18.5	0.8	3.2	3	0	0	3	3	3	2	FAD	binding	domain
NAD_binding_7	PF13241.6	gi|289595767|ref|YP_003482463.1|	-	4.9e-07	30.1	2.3	0.0034	17.8	0.2	3.2	2	1	1	3	3	3	2	Putative	NAD(P)-binding
Thi4	PF01946.17	gi|289595767|ref|YP_003482463.1|	-	2.6e-06	26.9	1.3	0.0023	17.2	0.1	2.7	2	0	0	2	2	2	2	Thi4	family
ApbA	PF02558.16	gi|289595767|ref|YP_003482463.1|	-	1.4e-05	24.8	2.7	0.00038	20.1	0.3	2.9	2	0	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
Lycopene_cycl	PF05834.12	gi|289595767|ref|YP_003482463.1|	-	0.00093	18.3	6.6	0.082	11.9	0.9	2.7	2	1	1	3	3	3	2	Lycopene	cyclase	protein
AlaDh_PNT_C	PF01262.21	gi|289595767|ref|YP_003482463.1|	-	0.0013	18.0	9.3	0.014	14.7	0.4	3.3	3	0	0	3	3	3	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
UDPG_MGDP_dh_N	PF03721.14	gi|289595767|ref|YP_003482463.1|	-	0.0039	16.8	4.0	0.31	10.6	0.3	2.5	2	0	0	2	2	2	2	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
ELFV_dehydrog	PF00208.21	gi|289595767|ref|YP_003482463.1|	-	0.0072	16.1	0.7	0.019	14.7	0.1	2.0	2	0	0	2	2	2	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
K_oxygenase	PF13434.6	gi|289595767|ref|YP_003482463.1|	-	0.012	14.8	0.6	0.085	12.0	0.1	2.1	2	0	0	2	2	2	0	L-lysine	6-monooxygenase	(NADPH-requiring)
AFOR_N	PF02730.15	gi|289595767|ref|YP_003482463.1|	-	0.015	15.1	1.2	2.8	7.8	0.1	3.3	3	0	0	3	3	3	0	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
PALP	PF00291.25	gi|289595767|ref|YP_003482463.1|	-	0.022	14.2	1.0	0.14	11.5	0.1	2.2	2	0	0	2	2	2	0	Pyridoxal-phosphate	dependent	enzyme
YdfZ	PF14001.6	gi|289595767|ref|YP_003482463.1|	-	0.023	15.1	0.1	0.17	12.3	0.1	2.4	2	0	0	2	2	2	0	YdfZ	protein
Shikimate_DH	PF01488.20	gi|289595767|ref|YP_003482463.1|	-	0.025	14.7	0.2	0.11	12.6	0.2	2.0	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
Rossmann-like	PF10727.9	gi|289595767|ref|YP_003482463.1|	-	0.026	14.4	0.2	0.072	12.9	0.2	1.7	1	0	0	1	1	1	0	Rossmann-like	domain
Fer2_3	PF13085.6	gi|289595767|ref|YP_003482463.1|	-	0.028	14.4	0.0	0.055	13.5	0.0	1.4	1	0	0	1	1	1	0	2Fe-2S	iron-sulfur	cluster	binding	domain
2-Hacid_dh_C	PF02826.19	gi|289595767|ref|YP_003482463.1|	-	0.03	13.7	1.4	0.27	10.6	0.4	2.7	3	0	0	3	3	3	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_9	PF13454.6	gi|289595767|ref|YP_003482463.1|	-	0.081	12.9	5.2	2.1	8.3	0.2	3.4	3	0	0	3	3	3	0	FAD-NAD(P)-binding
ThiF	PF00899.21	gi|289595767|ref|YP_003482463.1|	-	0.083	12.2	0.7	0.16	11.3	0.7	1.4	1	0	0	1	1	1	0	ThiF	family
TrkA_N	PF02254.18	gi|289595767|ref|YP_003482463.1|	-	0.81	10.0	6.4	0.33	11.2	0.4	3.1	3	0	0	3	3	3	0	TrkA-N	domain
Trp_halogenase	PF04820.14	gi|289595767|ref|YP_003482463.1|	-	1.5	7.6	9.1	1.7	7.4	0.6	2.8	3	0	0	3	3	3	0	Tryptophan	halogenase
3HCDH_N	PF02737.18	gi|289595767|ref|YP_003482463.1|	-	2.6	7.9	6.9	3.2	7.6	0.9	2.8	3	1	0	3	3	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
AdoHcyase_NAD	PF00670.21	gi|289595767|ref|YP_003482463.1|	-	4.4	7.4	6.6	1.6	8.8	0.2	3.1	4	0	0	4	4	3	0	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
F420_oxidored	PF03807.17	gi|289595767|ref|YP_003482463.1|	-	9	7.0	7.9	0.53	10.9	0.2	2.8	3	1	0	3	3	3	0	NADP	oxidoreductase	coenzyme	F420-dependent
PRC	PF05239.16	gi|289595768|ref|YP_003482464.1|	-	4.8e-13	49.0	1.1	5.3e-13	48.8	1.1	1.0	1	0	0	1	1	1	1	PRC-barrel	domain
tRNA-synt_1c	PF00749.21	gi|289595769|ref|YP_003482465.1|	-	1.1e-65	221.6	2.5	1.2e-65	221.5	0.0	1.9	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
tRNA-synt_1c_C	PF03950.18	gi|289595769|ref|YP_003482465.1|	-	9.9e-24	84.1	0.0	1.9e-23	83.2	0.0	1.5	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(E	and	Q),	anti-codon	binding	domain
CCDC73	PF15818.5	gi|289595769|ref|YP_003482465.1|	-	0.013	13.4	2.0	0.019	12.9	2.0	1.1	1	0	0	1	1	1	0	Coiled-coil	domain-containing	protein	73	family
Lipl32	PF12103.8	gi|289595769|ref|YP_003482465.1|	-	0.025	14.3	0.1	0.12	12.0	0.0	1.9	2	0	0	2	2	2	0	Surface	lipoprotein	of	Spirochaetales	order
tRNA-synt_1f	PF01921.18	gi|289595769|ref|YP_003482465.1|	-	0.03	13.2	0.0	4	6.3	0.0	2.4	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(K)
Spc7	PF08317.11	gi|289595769|ref|YP_003482465.1|	-	0.33	9.8	5.8	0.48	9.2	5.8	1.2	1	0	0	1	1	1	0	Spc7	kinetochore	protein
M16C_assoc	PF08367.11	gi|289595769|ref|YP_003482465.1|	-	3.6	6.7	8.2	5.4	6.1	8.2	1.2	1	0	0	1	1	1	0	Peptidase	M16C	associated
Phage_integrase	PF00589.22	gi|289595770|ref|YP_003482466.1|	-	1.7e-42	145.1	2.8	2.5e-42	144.6	2.8	1.2	1	0	0	1	1	1	1	Phage	integrase	family
Phage_int_SAM_4	PF13495.6	gi|289595770|ref|YP_003482466.1|	-	5.9e-06	26.7	8.1	0.00017	22.0	5.8	3.1	2	1	0	2	2	2	1	Phage	integrase,	N-terminal	SAM-like	domain
NOG1_N	PF17835.1	gi|289595771|ref|YP_003482467.1|	-	4.4e-40	137.3	1.4	7.4e-40	136.5	1.4	1.4	1	0	0	1	1	1	1	NOG1	N-terminal	helical	domain
NOG1	PF06858.14	gi|289595771|ref|YP_003482467.1|	-	4.5e-23	80.8	0.3	8.4e-23	79.9	0.3	1.5	1	0	0	1	1	1	1	Nucleolar	GTP-binding	protein	1	(NOG1)
MMR_HSR1	PF01926.23	gi|289595771|ref|YP_003482467.1|	-	2e-20	73.0	0.0	3.3e-20	72.3	0.0	1.4	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.18	gi|289595771|ref|YP_003482467.1|	-	1.1e-10	41.3	0.0	2.2e-10	40.3	0.0	1.5	1	1	0	1	1	1	1	Ferrous	iron	transport	protein	B
AIG1	PF04548.16	gi|289595771|ref|YP_003482467.1|	-	0.00093	18.6	0.0	0.0013	18.1	0.0	1.3	1	0	0	1	1	1	1	AIG1	family
SRPRB	PF09439.10	gi|289595771|ref|YP_003482467.1|	-	0.0034	16.9	0.0	0.007	15.8	0.0	1.5	1	0	0	1	1	1	1	Signal	recognition	particle	receptor	beta	subunit
Dynamin_N	PF00350.23	gi|289595771|ref|YP_003482467.1|	-	0.014	15.4	0.0	0.018	15.1	0.0	1.3	1	0	0	1	1	1	0	Dynamin	family
TniB	PF05621.11	gi|289595771|ref|YP_003482467.1|	-	0.054	12.9	0.1	0.22	10.9	0.1	2.0	1	1	0	1	1	1	0	Bacterial	TniB	protein
tRNA-synt_1g	PF09334.11	gi|289595772|ref|YP_003482468.1|	-	5.3e-162	539.0	0.0	7.2e-162	538.6	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(M)
tRNA_bind	PF01588.20	gi|289595772|ref|YP_003482468.1|	-	2.5e-29	101.2	0.0	1.4e-28	98.8	0.0	2.1	2	0	0	2	2	2	1	Putative	tRNA	binding	domain
tRNA-synt_1	PF00133.22	gi|289595772|ref|YP_003482468.1|	-	3e-22	78.6	1.5	1.5e-15	56.5	0.1	3.9	2	2	1	3	3	3	3	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.13	gi|289595772|ref|YP_003482468.1|	-	1.7e-15	57.3	2.0	3.1e-15	56.5	2.0	1.4	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1e	PF01406.19	gi|289595772|ref|YP_003482468.1|	-	3e-07	30.1	0.0	0.0051	16.2	0.0	2.6	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(C)	catalytic	domain
zf-RING_7	PF02591.15	gi|289595772|ref|YP_003482468.1|	-	0.00066	19.8	6.4	1.1	9.5	0.0	3.5	3	0	0	3	3	3	2	C4-type	zinc	ribbon	domain
DZR	PF12773.7	gi|289595772|ref|YP_003482468.1|	-	0.001	19.0	8.1	0.0022	18.0	8.1	1.6	1	0	0	1	1	1	1	Double	zinc	ribbon
tRNA-synt_1f	PF01921.18	gi|289595772|ref|YP_003482468.1|	-	0.012	14.5	0.1	0.012	14.5	0.1	2.0	3	0	0	3	3	3	0	tRNA	synthetases	class	I	(K)
DUF5301	PF17225.3	gi|289595772|ref|YP_003482468.1|	-	0.048	14.1	1.2	0.3	11.5	0.3	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF5300)
UPF0547	PF10571.9	gi|289595772|ref|YP_003482468.1|	-	0.075	13.1	4.0	0.3	11.2	4.0	2.0	1	1	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
zf-ribbon_3	PF13248.6	gi|289595772|ref|YP_003482468.1|	-	0.14	11.6	11.9	1.1	8.8	4.1	3.6	3	1	0	3	3	3	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.6	gi|289595772|ref|YP_003482468.1|	-	0.22	11.3	11.4	0.72	9.7	3.7	2.7	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc-ribbons_6	PF07191.12	gi|289595772|ref|YP_003482468.1|	-	0.59	10.2	4.6	1.1	9.2	4.6	1.5	1	0	0	1	1	1	0	zinc-ribbons
Prok-RING_1	PF14446.6	gi|289595772|ref|YP_003482468.1|	-	0.76	9.7	6.0	3.8	7.5	1.2	2.4	2	0	0	2	2	2	0	Prokaryotic	RING	finger	family	1
zf-C2HC5	PF06221.13	gi|289595772|ref|YP_003482468.1|	-	2.9	7.9	5.2	6.7	6.8	0.4	2.3	1	1	1	2	2	2	0	Putative	zinc	finger	motif,	C2HC5-type
PHP_C	PF13263.6	gi|289595773|ref|YP_003482469.1|	-	8.8e-14	51.0	0.1	2.1e-13	49.8	0.0	1.7	2	0	0	2	2	2	1	PHP-associated
PHP	PF02811.19	gi|289595773|ref|YP_003482469.1|	-	2.6e-13	50.6	0.1	4.9e-13	49.7	0.1	1.5	1	1	0	1	1	1	1	PHP	domain
Moricin	PF06451.11	gi|289595773|ref|YP_003482469.1|	-	0.55	10.0	6.5	5.4	6.9	4.2	2.7	2	0	0	2	2	2	0	Moricin
Robl_LC7	PF03259.17	gi|289595774|ref|YP_003482470.1|	-	4.9e-06	26.2	0.7	6.2e-06	25.9	0.7	1.1	1	0	0	1	1	1	1	Roadblock/LC7	domain
Na_Ca_ex	PF01699.24	gi|289595775|ref|YP_003482471.1|	-	6.7e-52	175.5	42.7	5.2e-27	94.7	11.8	2.3	3	0	0	3	3	3	2	Sodium/calcium	exchanger	protein
Hjc	PF01870.18	gi|289595776|ref|YP_003482472.1|	-	1.9e-15	56.6	0.0	2.5e-15	56.2	0.0	1.1	1	0	0	1	1	1	1	Archaeal	holliday	junction	resolvase	(hjc)
CRT10	PF08728.10	gi|289595776|ref|YP_003482472.1|	-	0.2	9.8	0.0	0.25	9.5	0.0	1.0	1	0	0	1	1	1	0	CRT10
CBS	PF00571.28	gi|289595777|ref|YP_003482473.1|	-	8.3e-26	90.2	1.3	5.1e-12	46.1	0.1	2.3	2	0	0	2	2	2	2	CBS	domain
DUF1589	PF07628.11	gi|289595777|ref|YP_003482473.1|	-	0.08	13.1	0.0	0.098	12.8	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1589)
TPR_2	PF07719.17	gi|289595778|ref|YP_003482474.1|	-	1e-22	78.4	1.5	3.6e-08	32.9	0.4	4.5	4	0	0	4	4	4	3	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|289595778|ref|YP_003482474.1|	-	1.1e-22	78.8	5.2	6.3e-09	35.3	1.3	4.2	4	0	0	4	4	4	3	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|289595778|ref|YP_003482474.1|	-	1.6e-18	65.3	1.5	8e-08	31.9	1.0	3.7	3	0	0	3	3	3	3	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|289595778|ref|YP_003482474.1|	-	2.6e-15	56.7	0.0	4.2e-08	33.6	0.0	2.2	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_10	PF13374.6	gi|289595778|ref|YP_003482474.1|	-	8.5e-15	54.1	0.4	8.1e-05	22.4	0.0	3.6	4	0	0	4	4	3	3	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|289595778|ref|YP_003482474.1|	-	1.2e-14	54.6	0.0	4.7e-09	36.8	0.0	2.3	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_7	PF13176.6	gi|289595778|ref|YP_003482474.1|	-	2e-11	43.0	0.0	0.0025	17.7	0.0	4.3	4	0	0	4	4	4	2	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|289595778|ref|YP_003482474.1|	-	2.7e-11	43.3	0.0	0.006	17.3	0.0	4.2	1	1	3	4	4	4	2	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|289595778|ref|YP_003482474.1|	-	4e-11	43.1	0.0	6.8e-06	26.3	0.0	2.7	1	1	2	3	3	3	3	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|289595778|ref|YP_003482474.1|	-	3e-09	36.9	0.1	0.0026	18.3	0.0	3.8	4	0	0	4	4	3	2	Tetratricopeptide	repeat
TPR_17	PF13431.6	gi|289595778|ref|YP_003482474.1|	-	9.9e-09	35.0	1.1	0.005	17.1	0.1	4.9	5	0	0	5	5	5	2	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|289595778|ref|YP_003482474.1|	-	1.7e-08	34.6	0.1	3.5e-05	24.0	0.1	2.6	1	1	1	2	2	2	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
Coatomer_E	PF04733.14	gi|289595778|ref|YP_003482474.1|	-	1.7e-07	30.9	0.1	0.00014	21.3	0.0	2.1	1	1	1	2	2	2	2	Coatomer	epsilon	subunit
TPR_11	PF13414.6	gi|289595778|ref|YP_003482474.1|	-	4.2e-07	29.5	0.4	0.00034	20.2	0.0	3.6	3	1	1	4	4	4	2	TPR	repeat
PPR	PF01535.20	gi|289595778|ref|YP_003482474.1|	-	2.4e-06	27.4	4.4	2	8.8	0.3	4.5	4	0	0	4	4	4	2	PPR	repeat
TPR_9	PF13371.6	gi|289595778|ref|YP_003482474.1|	-	0.00026	21.1	0.0	0.0011	19.1	0.0	2.1	3	0	0	3	3	2	1	Tetratricopeptide	repeat
Rapsyn_N	PF10579.9	gi|289595778|ref|YP_003482474.1|	-	0.0072	16.4	0.2	5.1	7.3	0.0	2.3	2	0	0	2	2	2	2	Rapsyn	N-terminal	myristoylation	and	linker	region
DUF4919	PF16266.5	gi|289595778|ref|YP_003482474.1|	-	0.014	15.3	0.3	0.033	14.1	0.2	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4919)
TPR_15	PF13429.6	gi|289595778|ref|YP_003482474.1|	-	0.021	14.1	0.0	2	7.5	0.0	2.1	1	1	1	2	2	2	0	Tetratricopeptide	repeat
NARP1	PF12569.8	gi|289595778|ref|YP_003482474.1|	-	0.025	13.5	0.1	0.037	13.0	0.1	1.3	1	0	0	1	1	1	0	NMDA	receptor-regulated	protein	1
PPR_2	PF13041.6	gi|289595778|ref|YP_003482474.1|	-	0.027	14.7	1.9	33	4.8	0.0	3.7	4	0	0	4	4	3	0	PPR	repeat	family
TPR_4	PF07721.14	gi|289595778|ref|YP_003482474.1|	-	0.049	14.3	0.0	15	6.5	0.0	3.4	4	0	0	4	4	3	0	Tetratricopeptide	repeat
Ribosomal_S7	PF00177.21	gi|289595778|ref|YP_003482474.1|	-	0.15	11.7	1.1	0.38	10.4	1.1	1.7	1	1	0	1	1	1	0	Ribosomal	protein	S7p/S5e
GET2	PF08690.10	gi|289595778|ref|YP_003482474.1|	-	0.54	9.9	5.4	0.89	9.2	5.4	1.3	1	0	0	1	1	1	0	GET	complex	subunit	GET2
PPR_1	PF12854.7	gi|289595778|ref|YP_003482474.1|	-	0.77	9.5	3.9	25	4.7	0.0	3.7	4	0	0	4	4	3	0	PPR	repeat
DUF4500	PF14937.6	gi|289595778|ref|YP_003482474.1|	-	1.1	9.3	7.9	0.27	11.3	0.6	3.0	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4500)
GDPD	PF03009.17	gi|289595779|ref|YP_003482475.1|	-	1.5e-31	110.1	0.1	6.8e-31	107.9	0.1	1.9	1	1	0	1	1	1	1	Glycerophosphoryl	diester	phosphodiesterase	family
BCL_N	PF04714.13	gi|289595779|ref|YP_003482475.1|	-	0.18	11.9	3.3	6.4	6.9	0.2	2.9	2	0	0	2	2	2	0	BCL7,	N-terminal	conserver	region
THF_DHG_CYH_C	PF02882.19	gi|289595780|ref|YP_003482476.1|	-	5.6e-57	191.5	1.3	7.6e-57	191.1	1.3	1.2	1	0	0	1	1	1	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
THF_DHG_CYH	PF00763.23	gi|289595780|ref|YP_003482476.1|	-	2.3e-27	95.6	0.1	4.3e-27	94.7	0.1	1.5	1	0	0	1	1	1	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	catalytic	domain
Peptidase_S13	PF02113.15	gi|289595780|ref|YP_003482476.1|	-	0.061	12.0	0.1	0.087	11.5	0.1	1.2	1	0	0	1	1	1	0	D-Ala-D-Ala	carboxypeptidase	3	(S13)	family
UPF0020	PF01170.18	gi|289595781|ref|YP_003482477.1|	-	2.6e-30	105.6	0.0	3.2e-29	102.0	0.0	2.0	1	1	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
N6_N4_Mtase	PF01555.18	gi|289595781|ref|YP_003482477.1|	-	2.1e-07	30.9	0.0	2.5e-05	24.1	0.0	2.1	2	0	0	2	2	2	1	DNA	methylase
Methyltransf_31	PF13847.6	gi|289595781|ref|YP_003482477.1|	-	1.3e-06	28.3	0.0	2e-06	27.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
AviRa	PF11599.8	gi|289595781|ref|YP_003482477.1|	-	2.2e-06	27.3	0.0	0.00011	21.7	0.0	2.1	1	1	1	2	2	2	1	RRNA	methyltransferase	AviRa
Methyltransf_15	PF09445.10	gi|289595781|ref|YP_003482477.1|	-	8.9e-05	22.1	0.0	0.00029	20.5	0.0	1.9	1	1	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Cons_hypoth95	PF03602.15	gi|289595781|ref|YP_003482477.1|	-	9.1e-05	22.2	0.0	0.00015	21.4	0.0	1.3	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltransf_25	PF13649.6	gi|289595781|ref|YP_003482477.1|	-	0.00028	21.5	0.0	0.00068	20.3	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|289595781|ref|YP_003482477.1|	-	0.00046	19.8	0.0	0.00068	19.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Ubie_methyltran	PF01209.18	gi|289595781|ref|YP_003482477.1|	-	0.0014	18.1	0.0	0.0022	17.4	0.0	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
PrmA	PF06325.13	gi|289595781|ref|YP_003482477.1|	-	0.0077	15.6	0.0	0.011	15.1	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
N6_Mtase	PF02384.16	gi|289595781|ref|YP_003482477.1|	-	0.0079	15.5	0.0	0.016	14.5	0.0	1.5	1	1	0	1	1	1	1	N-6	DNA	Methylase
MethyltransfD12	PF02086.15	gi|289595781|ref|YP_003482477.1|	-	0.062	13.0	0.0	0.18	11.4	0.0	1.7	1	1	1	2	2	2	0	D12	class	N6	adenine-specific	DNA	methyltransferase
Methyltransf_11	PF08241.12	gi|289595781|ref|YP_003482477.1|	-	0.1	13.2	0.0	0.22	12.2	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
N6-adenineMlase	PF10237.9	gi|289595781|ref|YP_003482477.1|	-	0.19	11.5	0.0	0.3	10.9	0.0	1.3	1	0	0	1	1	1	0	Probable	N6-adenine	methyltransferase
DUF4500	PF14937.6	gi|289595782|ref|YP_003482478.1|	-	0.0074	16.3	0.1	0.0097	15.9	0.1	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4500)
T2SSF	PF00482.23	gi|289595783|ref|YP_003482479.1|	-	0.0062	16.5	0.1	2.4	8.1	0.0	2.3	1	1	1	2	2	2	2	Type	II	secretion	system	(T2SS),	protein	F
Peptidase_M13_N	PF05649.13	gi|289595783|ref|YP_003482479.1|	-	0.0081	15.9	0.1	0.0092	15.7	0.1	1.1	1	0	0	1	1	1	1	Peptidase	family	M13
FliG_N	PF14842.6	gi|289595783|ref|YP_003482479.1|	-	0.01	16.4	4.3	0.018	15.6	0.3	2.1	2	0	0	2	2	2	0	FliG	N-terminal	domain
PhageMin_Tail	PF10145.9	gi|289595783|ref|YP_003482479.1|	-	0.035	14.0	0.0	0.045	13.6	0.0	1.2	1	0	0	1	1	1	0	Phage-related	minor	tail	protein
Imm57	PF15596.6	gi|289595783|ref|YP_003482479.1|	-	0.072	13.4	0.6	2.5	8.5	0.6	2.1	1	1	0	1	1	1	0	Immunity	protein	57
DUF5398	PF17376.2	gi|289595783|ref|YP_003482479.1|	-	0.12	13.0	0.1	0.12	13.0	0.1	2.2	2	1	1	3	3	3	0	Family	of	unknown	function	(DUF5398)
E1_dh	PF00676.20	gi|289595783|ref|YP_003482479.1|	-	0.15	11.0	1.2	0.25	10.3	0.9	1.5	1	1	0	1	1	1	0	Dehydrogenase	E1	component
TAFH	PF07531.14	gi|289595783|ref|YP_003482479.1|	-	0.18	11.9	0.7	2.1	8.5	0.0	2.3	2	1	0	2	2	2	0	NHR1	homology	to	TAF
HTH_5	PF01022.20	gi|289595784|ref|YP_003482480.1|	-	4.3e-05	23.3	0.1	0.00034	20.4	0.1	2.2	1	1	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
Penicillinase_R	PF03965.16	gi|289595784|ref|YP_003482480.1|	-	8.6e-05	22.9	0.0	0.00027	21.3	0.0	1.7	2	0	0	2	2	2	1	Penicillinase	repressor
HTH_24	PF13412.6	gi|289595784|ref|YP_003482480.1|	-	0.00054	19.5	1.1	0.011	15.3	1.1	2.4	1	1	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TFIIE_alpha	PF02002.17	gi|289595784|ref|YP_003482480.1|	-	0.0048	16.7	0.2	0.0048	16.7	0.2	1.6	2	0	0	2	2	2	1	TFIIE	alpha	subunit
TrmB	PF01978.19	gi|289595784|ref|YP_003482480.1|	-	0.0079	16.1	0.1	0.021	14.7	0.1	1.7	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
Sigma70_r4	PF04545.16	gi|289595784|ref|YP_003482480.1|	-	0.025	14.1	0.6	0.059	12.9	0.3	1.8	2	0	0	2	2	2	0	Sigma-70,	region	4
HTH_12	PF08461.10	gi|289595784|ref|YP_003482480.1|	-	0.033	14.1	0.6	0.61	10.1	0.6	2.4	1	1	1	2	2	2	0	Ribonuclease	R	winged-helix	domain
TF_AP-2	PF03299.14	gi|289595784|ref|YP_003482480.1|	-	0.09	12.7	0.1	0.13	12.3	0.1	1.3	1	0	0	1	1	1	0	Transcription	factor	AP-2
HxlR	PF01638.17	gi|289595784|ref|YP_003482480.1|	-	0.1	12.5	0.1	0.27	11.1	0.1	1.8	1	1	0	1	1	1	0	HxlR-like	helix-turn-helix
HTH_9	PF08221.11	gi|289595784|ref|YP_003482480.1|	-	0.11	12.7	0.0	0.27	11.3	0.0	1.7	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
Terpene_synth_C	PF03936.16	gi|289595784|ref|YP_003482480.1|	-	0.11	11.8	0.1	0.22	10.8	0.0	1.5	1	1	0	1	1	1	0	Terpene	synthase	family,	metal	binding	domain
GntR	PF00392.21	gi|289595784|ref|YP_003482480.1|	-	0.12	12.0	0.2	0.37	10.5	0.2	1.9	1	1	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
DUF2551	PF10826.8	gi|289595784|ref|YP_003482480.1|	-	0.12	12.6	1.4	0.96	9.7	0.2	2.3	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2551)
Serpin	PF00079.20	gi|289595785|ref|YP_003482481.1|	-	2.9e-112	375.7	1.0	3.3e-112	375.5	1.0	1.0	1	0	0	1	1	1	1	Serpin	(serine	protease	inhibitor)
P2_Phage_GpR	PF06891.11	gi|289595785|ref|YP_003482481.1|	-	0.094	12.8	0.5	20	5.3	0.0	2.5	2	0	0	2	2	2	0	P2	phage	tail	completion	protein	R	(GpR)
zf-ribbon_3	PF13248.6	gi|289595786|ref|YP_003482482.1|	-	2.2e-10	39.6	16.3	3.2e-09	35.9	2.9	3.2	3	0	0	3	3	3	1	zinc-ribbon	domain
zinc_ribbon_2	PF13240.6	gi|289595786|ref|YP_003482482.1|	-	2.5e-10	39.7	5.7	2.5e-10	39.7	5.7	3.3	3	0	0	3	3	3	1	zinc-ribbon	domain
DZR	PF12773.7	gi|289595786|ref|YP_003482482.1|	-	2.8e-07	30.5	5.7	4.5e-06	26.6	5.7	2.2	1	1	0	1	1	1	1	Double	zinc	ribbon
TF_Zn_Ribbon	PF08271.12	gi|289595786|ref|YP_003482482.1|	-	2e-06	27.2	9.8	3.2e-05	23.3	0.8	4.4	4	1	0	4	4	4	1	TFIIB	zinc-binding
Nudix_N_2	PF14803.6	gi|289595786|ref|YP_003482482.1|	-	7.8e-06	25.7	11.3	0.14	12.1	3.4	3.4	2	1	1	3	3	3	3	Nudix	N-terminal
UPF0547	PF10571.9	gi|289595786|ref|YP_003482482.1|	-	2.2e-05	24.5	0.8	2.2e-05	24.5	0.8	3.2	3	0	0	3	3	3	1	Uncharacterised	protein	family	UPF0547
NMD3	PF04981.13	gi|289595786|ref|YP_003482482.1|	-	0.00018	21.0	1.1	0.0021	17.5	0.9	2.2	1	1	0	1	1	1	1	NMD3	family
zinc_ribbon_15	PF17032.5	gi|289595786|ref|YP_003482482.1|	-	0.00064	20.4	8.0	0.0026	18.5	2.9	2.4	2	1	0	2	2	2	1	zinc-ribbon	family
Zn-ribbon_8	PF09723.10	gi|289595786|ref|YP_003482482.1|	-	0.00085	19.4	8.1	0.08	13.1	0.4	3.3	1	1	1	3	3	3	1	Zinc	ribbon	domain
zinc_ribbon_10	PF10058.9	gi|289595786|ref|YP_003482482.1|	-	0.0039	16.9	0.2	0.0039	16.9	0.2	3.0	1	1	2	3	3	3	1	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
HypA	PF01155.19	gi|289595786|ref|YP_003482482.1|	-	0.0042	17.1	2.0	2.6	8.1	0.0	2.5	1	1	1	2	2	2	2	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zf-TFIIB	PF13453.6	gi|289595786|ref|YP_003482482.1|	-	0.012	14.9	6.0	2.8	7.4	1.4	3.5	2	1	0	2	2	2	0	Transcription	factor	zinc-finger
DNA_ligase_ZBD	PF03119.16	gi|289595786|ref|YP_003482482.1|	-	0.018	15.1	3.8	8.1	6.6	0.0	3.5	3	0	0	3	3	3	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-C3HC4_3	PF13920.6	gi|289595786|ref|YP_003482482.1|	-	0.034	14.0	0.3	0.034	14.0	0.3	2.4	2	1	0	2	2	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
YhfH	PF14149.6	gi|289595786|ref|YP_003482482.1|	-	0.038	14.0	6.8	2.8	8.0	0.1	4.0	3	1	1	4	4	4	0	YhfH-like	protein
zinc_ribbon_9	PF14369.6	gi|289595786|ref|YP_003482482.1|	-	0.049	13.9	11.8	2.4	8.5	0.0	4.2	3	1	1	4	4	4	0	zinc-ribbon
zf-CHY	PF05495.12	gi|289595786|ref|YP_003482482.1|	-	0.088	13.3	2.3	4.1	8.0	0.0	2.2	1	1	0	2	2	2	0	CHY	zinc	finger
zf-RING_7	PF02591.15	gi|289595786|ref|YP_003482482.1|	-	0.092	13.0	7.6	13	6.1	0.2	4.1	4	0	0	4	4	4	0	C4-type	zinc	ribbon	domain
DUF35_N	PF12172.8	gi|289595786|ref|YP_003482482.1|	-	0.1	12.5	12.2	20	5.2	0.1	4.4	4	0	0	4	4	4	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
OrfB_Zn_ribbon	PF07282.11	gi|289595786|ref|YP_003482482.1|	-	0.11	12.4	5.1	1.8	8.5	0.8	3.1	1	1	2	3	3	3	0	Putative	transposase	DNA-binding	domain
zf-C4H2	PF10146.9	gi|289595786|ref|YP_003482482.1|	-	0.18	12.1	0.5	0.34	11.2	0.5	1.4	1	0	0	1	1	1	0	Zinc	finger-containing	protein
zinc-ribbons_6	PF07191.12	gi|289595786|ref|YP_003482482.1|	-	0.23	11.5	5.0	5	7.2	5.0	2.5	1	1	0	1	1	1	0	zinc-ribbons
YacG	PF03884.14	gi|289595786|ref|YP_003482482.1|	-	0.41	10.4	5.7	0.2	11.4	1.5	2.3	2	0	0	2	2	2	0	DNA	gyrase	inhibitor	YacG
zf-NADH-PPase	PF09297.11	gi|289595786|ref|YP_003482482.1|	-	0.53	10.0	16.2	0.29	10.8	0.4	3.6	3	1	1	4	4	3	0	NADH	pyrophosphatase	zinc	ribbon	domain
DUF2072	PF09845.9	gi|289595786|ref|YP_003482482.1|	-	0.56	10.5	4.3	11	6.3	0.2	2.5	2	1	0	2	2	2	0	Zn-ribbon	containing	protein
zf-C2H2_4	PF13894.6	gi|289595786|ref|YP_003482482.1|	-	0.69	10.9	12.2	11	7.1	0.2	4.4	3	1	1	4	4	4	0	C2H2-type	zinc	finger
A2L_zn_ribbon	PF08792.10	gi|289595786|ref|YP_003482482.1|	-	0.79	9.5	11.3	7.3	6.4	0.4	3.5	3	1	0	3	3	3	0	A2L	zinc	ribbon	domain
PriA_CRR	PF18319.1	gi|289595786|ref|YP_003482482.1|	-	1	9.4	12.2	7.9	6.6	0.2	4.2	4	0	0	4	4	4	0	PriA	DNA	helicase	Cys-rich	region	(CRR)	domain
Cys_rich_CPXG	PF14255.6	gi|289595786|ref|YP_003482482.1|	-	1.1	9.2	14.9	18	5.3	0.1	4.3	4	0	0	4	4	4	0	Cysteine-rich	CPXCG
Ribosomal_L32p	PF01783.23	gi|289595786|ref|YP_003482482.1|	-	1.7	9.0	6.3	17	5.8	0.2	3.1	3	1	0	3	3	3	0	Ribosomal	L32p	protein	family
zf_Rg	PF17915.1	gi|289595786|ref|YP_003482482.1|	-	1.7	8.1	7.6	1.1	8.7	0.6	3.2	2	1	1	3	3	3	0	Reverse	gyrase	zinc	finger
DUF2321	PF10083.9	gi|289595786|ref|YP_003482482.1|	-	1.9	8.1	6.6	0.39	10.4	2.4	2.0	2	1	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2321)
Prok-RING_4	PF14447.6	gi|289595786|ref|YP_003482482.1|	-	2	8.3	8.7	0.65	9.9	0.8	2.7	2	1	0	2	2	2	0	Prokaryotic	RING	finger	family	4
zf-tcix	PF14952.6	gi|289595786|ref|YP_003482482.1|	-	2.4	7.9	9.6	19	5.0	0.1	3.2	2	1	1	3	3	3	0	Putative	treble-clef,	zinc-finger,	Zn-binding
zf-SNAP50_C	PF12251.8	gi|289595786|ref|YP_003482482.1|	-	2.4	7.8	4.4	0.6	9.8	0.3	2.0	1	1	2	3	3	3	0	snRNA-activating	protein	of	50kDa	MW	C	terminal
zf-C4_Topoisom	PF01396.19	gi|289595786|ref|YP_003482482.1|	-	2.9	7.7	10.4	6	6.7	0.2	4.0	4	0	0	4	4	4	0	Topoisomerase	DNA	binding	C4	zinc	finger
Cys_rich_CPCC	PF14206.6	gi|289595786|ref|YP_003482482.1|	-	3.1	7.7	6.0	12	5.8	1.5	2.4	1	1	1	2	2	2	0	Cysteine-rich	CPCC
DUF2115	PF09888.9	gi|289595786|ref|YP_003482482.1|	-	3.4	8.2	5.0	5.4	7.5	0.1	2.3	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2115)
DpnI	PF06044.12	gi|289595786|ref|YP_003482482.1|	-	3.5	7.2	6.6	19	4.8	0.6	2.9	1	1	2	3	3	3	0	Dam-replacing	family
ADK_lid	PF05191.14	gi|289595786|ref|YP_003482482.1|	-	3.6	7.6	9.0	27	4.9	1.6	3.9	3	1	0	3	3	3	0	Adenylate	kinase,	active	site	lid
Prim_Zn_Ribbon	PF08273.12	gi|289595786|ref|YP_003482482.1|	-	3.6	7.9	15.7	15	5.9	4.1	4.0	3	1	0	3	3	3	0	Zinc-binding	domain	of	primase-helicase
Prok-RING_1	PF14446.6	gi|289595786|ref|YP_003482482.1|	-	4.5	7.3	9.4	3.1	7.8	1.5	2.7	2	2	0	2	2	2	0	Prokaryotic	RING	finger	family	1
DUF1451	PF07295.11	gi|289595786|ref|YP_003482482.1|	-	5.3	7.1	8.3	11	6.1	0.0	2.8	2	1	1	3	3	3	0	Zinc-ribbon	containing	domain
Zn_Tnp_IS1595	PF12760.7	gi|289595786|ref|YP_003482482.1|	-	5.5	7.0	15.3	23	5.1	3.9	3.8	1	1	2	3	3	3	0	Transposase	zinc-ribbon	domain
zf-ISL3	PF14690.6	gi|289595786|ref|YP_003482482.1|	-	6.6	7.5	11.5	43	4.9	0.2	4.2	3	1	1	4	4	4	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Rubredoxin	PF00301.20	gi|289595786|ref|YP_003482482.1|	-	7.3	6.7	15.1	5.4	7.1	0.7	3.9	3	1	1	4	4	4	0	Rubredoxin
Lar_restr_allev	PF14354.6	gi|289595786|ref|YP_003482482.1|	-	7.6	7.0	14.1	7.8	7.0	1.3	3.5	2	1	1	3	3	3	0	Restriction	alleviation	protein	Lar
zf-C2HC5	PF06221.13	gi|289595786|ref|YP_003482482.1|	-	9.9	6.2	9.7	2.9	7.9	1.0	2.7	2	1	0	2	2	2	0	Putative	zinc	finger	motif,	C2HC5-type
Nop	PF01798.18	gi|289595787|ref|YP_003482483.1|	-	7.2e-44	150.0	0.1	9.1e-44	149.6	0.1	1.2	1	0	0	1	1	1	1	snoRNA	binding	domain,	fibrillarin
DUF1943	PF09172.11	gi|289595787|ref|YP_003482483.1|	-	0.13	11.5	0.7	0.19	11.0	0.1	1.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1943)
MoaE	PF02391.17	gi|289595788|ref|YP_003482484.1|	-	1.2e-23	83.5	0.0	1.4e-23	83.3	0.0	1.0	1	0	0	1	1	1	1	MoaE	protein
ZT_dimer	PF16916.5	gi|289595788|ref|YP_003482484.1|	-	0.094	12.9	0.5	0.21	11.7	0.2	1.7	2	0	0	2	2	2	0	Dimerisation	domain	of	Zinc	Transporter
OsmC	PF02566.19	gi|289595789|ref|YP_003482485.1|	-	4.1e-18	65.7	0.0	5.7e-18	65.2	0.0	1.1	1	0	0	1	1	1	1	OsmC-like	protein
Fimbrial_CS1	PF04449.12	gi|289595789|ref|YP_003482485.1|	-	0.024	14.8	0.3	0.059	13.5	0.2	1.6	2	0	0	2	2	2	0	CS1	type	fimbrial	major	subunit
ThiF	PF00899.21	gi|289595790|ref|YP_003482486.1|	-	8.7e-51	172.6	0.1	1.1e-50	172.3	0.1	1.1	1	0	0	1	1	1	1	ThiF	family
DUF5416	PF17437.2	gi|289595790|ref|YP_003482486.1|	-	0.0083	15.9	0.9	0.011	15.5	0.9	1.2	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5416)
ThiS	PF02597.20	gi|289595791|ref|YP_003482487.1|	-	3.7e-10	40.3	0.0	4.4e-10	40.0	0.0	1.1	1	0	0	1	1	1	1	ThiS	family
Ub-Mut7C	PF14451.6	gi|289595791|ref|YP_003482487.1|	-	0.032	14.1	0.0	0.077	12.8	0.0	1.6	1	1	0	1	1	1	0	Mut7-C	ubiquitin
RRM_9	PF18444.1	gi|289595791|ref|YP_003482487.1|	-	0.13	12.1	0.0	0.18	11.7	0.0	1.4	1	1	0	1	1	1	0	RNA	recognition	motif
Peptidase_M24	PF00557.24	gi|289595792|ref|YP_003482488.1|	-	7e-28	97.7	0.5	9.5e-28	97.3	0.5	1.2	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.18	gi|289595792|ref|YP_003482488.1|	-	1.6e-15	57.9	0.8	9.2e-15	55.5	0.1	2.3	2	1	1	3	3	3	1	Creatinase/Prolidase	N-terminal	domain
DUF438	PF04282.13	gi|289595793|ref|YP_003482489.1|	-	7.8e-26	89.8	1.7	7.8e-26	89.8	1.7	2.9	3	0	0	3	3	3	1	Family	of	unknown	function	(DUF438)
PAS_10	PF13596.6	gi|289595793|ref|YP_003482489.1|	-	5.6e-23	81.6	0.1	2.8e-22	79.3	0.0	2.1	2	0	0	2	2	2	1	PAS	domain
Hemerythrin	PF01814.23	gi|289595793|ref|YP_003482489.1|	-	1.8e-17	64.2	0.2	4.1e-17	63.0	0.0	1.7	2	0	0	2	2	2	1	Hemerythrin	HHE	cation	binding	domain
TraE	PF05309.11	gi|289595793|ref|YP_003482489.1|	-	0.2	11.0	0.0	0.41	10.0	0.0	1.4	1	0	0	1	1	1	0	TraE	protein
TMP-TENI	PF02581.17	gi|289595794|ref|YP_003482490.1|	-	8.7e-61	204.4	1.6	1e-60	204.2	1.6	1.0	1	0	0	1	1	1	1	Thiamine	monophosphate	synthase
NMO	PF03060.15	gi|289595794|ref|YP_003482490.1|	-	9.9e-07	28.4	0.9	1.4e-06	27.9	0.9	1.3	1	0	0	1	1	1	1	Nitronate	monooxygenase
NanE	PF04131.14	gi|289595794|ref|YP_003482490.1|	-	0.00087	18.5	0.5	0.0021	17.3	0.3	1.7	1	1	1	2	2	2	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
His_biosynth	PF00977.21	gi|289595794|ref|YP_003482490.1|	-	0.0012	18.4	1.2	0.0056	16.2	1.2	2.1	1	1	0	1	1	1	1	Histidine	biosynthesis	protein
QRPTase_C	PF01729.19	gi|289595794|ref|YP_003482490.1|	-	0.0038	17.0	1.2	0.0077	16.0	0.2	1.8	2	0	0	2	2	2	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
ThiG	PF05690.14	gi|289595794|ref|YP_003482490.1|	-	0.0039	16.5	0.3	0.0089	15.4	0.2	1.6	1	1	0	1	1	1	1	Thiazole	biosynthesis	protein	ThiG
DUF561	PF04481.12	gi|289595794|ref|YP_003482490.1|	-	0.042	13.0	1.0	0.084	12.0	0.9	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF561)
SUD-M	PF11633.8	gi|289595794|ref|YP_003482490.1|	-	0.072	12.8	0.5	6	6.6	0.1	2.1	1	1	1	2	2	2	0	Single-stranded	poly(A)	binding	domain
OKR_DC_1	PF01276.20	gi|289595795|ref|YP_003482491.1|	-	3e-57	194.2	0.3	1.1e-55	189.1	0.3	2.0	1	1	0	1	1	1	1	Orn/Lys/Arg	decarboxylase,	major	domain
OKR_DC_1_C	PF03711.15	gi|289595795|ref|YP_003482491.1|	-	3.6e-10	40.3	0.0	7.3e-10	39.2	0.0	1.4	1	0	0	1	1	1	1	Orn/Lys/Arg	decarboxylase,	C-terminal	domain
Aminotran_1_2	PF00155.21	gi|289595795|ref|YP_003482491.1|	-	1.7e-06	27.5	0.0	2.6e-06	26.9	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.19	gi|289595795|ref|YP_003482491.1|	-	5.1e-05	22.4	0.0	8.2e-05	21.7	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class-V
Met_gamma_lyase	PF06838.11	gi|289595795|ref|YP_003482491.1|	-	0.0079	14.8	0.0	0.012	14.1	0.0	1.2	1	0	0	1	1	1	1	Methionine	gamma-lyase
FeS_assembly_P	PF01883.19	gi|289595796|ref|YP_003482492.1|	-	3.7e-24	84.7	0.2	4.5e-24	84.4	0.2	1.1	1	0	0	1	1	1	1	Iron-sulfur	cluster	assembly	protein
UDG	PF03167.19	gi|289595797|ref|YP_003482493.1|	-	1.1e-46	158.7	0.0	1.3e-46	158.4	0.0	1.1	1	0	0	1	1	1	1	Uracil	DNA	glycosylase	superfamily
RecR	PF02132.15	gi|289595797|ref|YP_003482493.1|	-	0.091	12.4	0.2	0.22	11.1	0.0	1.7	2	0	0	2	2	2	0	RecR	protein
PAS_9	PF13426.7	gi|289595798|ref|YP_003482494.1|	-	9.6e-102	334.3	10.4	1.2e-18	67.3	0.1	7.7	7	0	0	7	7	7	6	PAS	domain
PAS	PF00989.25	gi|289595798|ref|YP_003482494.1|	-	9.4e-96	315.5	0.2	3.7e-19	68.8	0.0	7.3	7	0	0	7	7	7	6	PAS	fold
PAS_4	PF08448.10	gi|289595798|ref|YP_003482494.1|	-	1.9e-68	227.6	0.0	5.6e-14	52.3	0.0	7.4	7	0	0	7	7	7	7	PAS	fold
PAS_3	PF08447.12	gi|289595798|ref|YP_003482494.1|	-	1.6e-56	188.5	0.1	2e-10	40.8	0.1	6.9	6	0	0	6	6	6	6	PAS	fold
PAS_8	PF13188.7	gi|289595798|ref|YP_003482494.1|	-	1.4e-53	178.1	0.1	2.2e-08	33.9	0.0	7.5	7	0	0	7	7	7	6	PAS	domain
GAF_2	PF13185.6	gi|289595798|ref|YP_003482494.1|	-	1.9e-41	141.6	0.0	2.5e-14	53.7	0.0	4.4	4	0	0	4	4	4	3	GAF	domain
GAF_3	PF13492.6	gi|289595798|ref|YP_003482494.1|	-	2e-27	96.1	0.0	2.5e-08	34.3	0.0	3.6	3	0	0	3	3	3	3	GAF	domain
GAF	PF01590.26	gi|289595798|ref|YP_003482494.1|	-	2.8e-23	83.0	0.0	5.4e-08	33.5	0.0	3.8	4	0	0	4	4	3	3	GAF	domain
HATPase_c	PF02518.26	gi|289595798|ref|YP_003482494.1|	-	2.4e-22	79.5	0.2	1.2e-21	77.3	0.1	2.3	2	0	0	2	2	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_12	PF18095.1	gi|289595798|ref|YP_003482494.1|	-	1.3e-11	44.3	2.5	0.0088	15.7	0.1	6.4	6	0	0	6	6	6	2	UPF0242	C-terminal	PAS-like	domain
PAS_10	PF13596.6	gi|289595798|ref|YP_003482494.1|	-	6.8e-11	42.7	3.3	1.8e-05	25.3	0.0	5.0	6	1	0	6	6	3	2	PAS	domain
PAS_7	PF12860.7	gi|289595798|ref|YP_003482494.1|	-	1e-08	35.3	2.3	0.2	11.8	0.0	7.0	7	2	0	7	7	7	2	PAS	fold
HisKA	PF00512.25	gi|289595798|ref|YP_003482494.1|	-	2.1e-08	34.1	0.0	8.5e-08	32.1	0.0	2.2	1	0	0	1	1	1	1	His	Kinase	A	(phospho-acceptor)	domain
HATPase_c_2	PF13581.6	gi|289595798|ref|YP_003482494.1|	-	4.5e-06	26.6	0.0	4.8e-05	23.3	0.0	2.4	2	0	0	2	2	2	1	Histidine	kinase-like	ATPase	domain
PAS_2	PF08446.11	gi|289595798|ref|YP_003482494.1|	-	5.8e-06	26.9	0.0	1.3	9.7	0.0	3.8	3	0	0	3	3	3	2	PAS	fold
HATPase_c_3	PF13589.6	gi|289595798|ref|YP_003482494.1|	-	1.5e-05	24.8	1.0	3.5e-05	23.6	0.1	2.1	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
Cache_3-Cache_2	PF17201.4	gi|289595798|ref|YP_003482494.1|	-	2.4e-05	23.8	3.1	0.91	8.7	0.0	5.1	3	2	2	5	5	5	1	Cache	3/Cache	2	fusion	domain
dCache_2	PF08269.11	gi|289595798|ref|YP_003482494.1|	-	3e-05	23.4	12.2	0.003	16.8	1.8	3.2	3	0	0	3	3	3	2	Cache	domain
PAS_11	PF14598.6	gi|289595798|ref|YP_003482494.1|	-	8.2e-05	22.7	0.0	9.8	6.4	0.0	5.7	6	0	0	6	6	5	0	PAS	domain
HATPase_c_5	PF14501.6	gi|289595798|ref|YP_003482494.1|	-	0.00012	21.9	0.1	0.00053	19.8	0.1	2.1	1	0	0	1	1	1	1	GHKL	domain
sCache_2	PF17200.4	gi|289595798|ref|YP_003482494.1|	-	0.00014	21.8	1.1	0.41	10.5	0.1	2.7	2	0	0	2	2	2	2	Single	Cache	domain	2
Bro-N	PF02498.17	gi|289595798|ref|YP_003482494.1|	-	0.00029	21.5	0.1	5.5	7.8	0.0	4.6	4	0	0	4	4	4	0	BRO	family,	N-terminal	domain
PAS_6	PF08348.11	gi|289595798|ref|YP_003482494.1|	-	0.00044	20.1	0.1	0.03	14.2	0.0	3.0	2	0	0	2	2	2	1	YheO-like	PAS	domain
ZNRF_3_ecto	PF18212.1	gi|289595798|ref|YP_003482494.1|	-	0.00083	19.3	0.2	2.1	8.4	0.0	4.5	4	0	0	4	4	4	1	ZNRF-3	Ectodomain
MEKHLA	PF08670.11	gi|289595798|ref|YP_003482494.1|	-	0.00099	19.0	0.0	4	7.3	0.0	4.4	5	0	0	5	5	5	1	MEKHLA	domain
DUF3369	PF11849.8	gi|289595798|ref|YP_003482494.1|	-	0.0043	17.3	8.8	2.8	8.1	0.0	5.5	5	1	1	6	6	6	1	Domain	of	unknown	function	(DUF3369)
SPOB_a	PF14689.6	gi|289595798|ref|YP_003482494.1|	-	0.0075	16.0	0.1	0.036	13.8	0.1	2.2	1	0	0	1	1	1	1	Sensor_kinase_SpoOB-type,	alpha-helical	domain
UvrA_inter	PF17760.1	gi|289595798|ref|YP_003482494.1|	-	0.041	14.0	10.0	0.074	13.1	0.2	4.6	3	1	1	4	4	4	0	UvrA	interaction	domain
DUF2111	PF09884.9	gi|289595798|ref|YP_003482494.1|	-	0.043	13.9	0.2	2.4	8.3	0.0	3.5	3	0	0	3	3	3	0	Uncharacterized	protein	conserved	in	archaea	(DUF2111)
DUF484	PF04340.12	gi|289595798|ref|YP_003482494.1|	-	0.044	13.5	0.0	4.3	7.0	0.1	2.9	3	0	0	3	3	3	0	Protein	of	unknown	function,	DUF484
sCache_3_3	PF17202.4	gi|289595798|ref|YP_003482494.1|	-	0.089	13.2	0.0	47	4.5	0.0	3.4	3	0	0	3	3	3	0	Single	cache	domain	3
dCache_1	PF02743.18	gi|289595798|ref|YP_003482494.1|	-	0.11	12.3	6.3	2.3	7.9	0.2	4.6	3	2	1	4	4	4	0	Cache	domain
TBPIP_N	PF15517.6	gi|289595798|ref|YP_003482494.1|	-	0.37	10.8	4.9	2	8.5	0.8	3.9	2	0	0	2	2	2	0	TBP-interacting	protein	N-terminus
Met_10	PF02475.16	gi|289595799|ref|YP_003482495.1|	-	2.4e-59	200.4	0.4	3.2e-59	200.0	0.4	1.1	1	0	0	1	1	1	1	Met-10+	like-protein
Trm5_N	PF18093.1	gi|289595799|ref|YP_003482495.1|	-	1.5e-13	50.4	1.2	3.3e-13	49.3	1.2	1.6	1	0	0	1	1	1	1	tRNA	methyltransferase	5	N-terminal	domain
PrmA	PF06325.13	gi|289595799|ref|YP_003482495.1|	-	1.6e-09	37.6	0.0	2.2e-09	37.1	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
MTS	PF05175.14	gi|289595799|ref|YP_003482495.1|	-	1.3e-08	34.6	0.0	2.3e-08	33.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltr_RsmB-F	PF01189.17	gi|289595799|ref|YP_003482495.1|	-	9.8e-06	25.3	0.0	1.8e-05	24.5	0.0	1.5	1	0	0	1	1	1	1	16S	rRNA	methyltransferase	RsmB/F
TRM	PF02005.16	gi|289595799|ref|YP_003482495.1|	-	1.2e-05	24.7	0.0	1.6e-05	24.3	0.0	1.2	1	0	0	1	1	1	1	N2,N2-dimethylguanosine	tRNA	methyltransferase
Methyltransf_25	PF13649.6	gi|289595799|ref|YP_003482495.1|	-	1.7e-05	25.4	0.0	5e-05	23.9	0.0	1.8	2	0	0	2	2	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|289595799|ref|YP_003482495.1|	-	2.2e-05	24.3	0.1	0.00059	19.7	0.0	2.2	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_15	PF09445.10	gi|289595799|ref|YP_003482495.1|	-	5.6e-05	22.8	0.0	0.00011	21.9	0.0	1.4	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
DNA_methylase	PF00145.17	gi|289595799|ref|YP_003482495.1|	-	0.00023	20.6	0.4	0.0011	18.4	0.1	1.9	2	0	0	2	2	2	1	C-5	cytosine-specific	DNA	methylase
Methyltransf_18	PF12847.7	gi|289595799|ref|YP_003482495.1|	-	0.00023	21.1	0.0	0.00048	20.1	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
PRMT5	PF05185.16	gi|289595799|ref|YP_003482495.1|	-	0.00024	21.0	0.0	0.0046	16.8	0.0	2.2	2	0	0	2	2	2	1	PRMT5	arginine-N-methyltransferase
Methyltransf_16	PF10294.9	gi|289595799|ref|YP_003482495.1|	-	0.0029	17.4	0.0	0.0063	16.3	0.0	1.5	1	1	0	1	1	1	1	Lysine	methyltransferase
MethyltransfD12	PF02086.15	gi|289595799|ref|YP_003482495.1|	-	0.0053	16.5	0.2	0.01	15.5	0.1	1.6	2	0	0	2	2	2	1	D12	class	N6	adenine-specific	DNA	methyltransferase
tRNA_U5-meth_tr	PF05958.11	gi|289595799|ref|YP_003482495.1|	-	0.0099	14.9	0.0	0.013	14.6	0.0	1.2	1	0	0	1	1	1	1	tRNA	(Uracil-5-)-methyltransferase
Cons_hypoth95	PF03602.15	gi|289595799|ref|YP_003482495.1|	-	0.027	14.1	0.0	0.052	13.2	0.0	1.5	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
Beta-Casp	PF10996.8	gi|289595800|ref|YP_003482496.1|	-	8.8e-27	93.6	0.0	2.1e-26	92.4	0.0	1.7	1	0	0	1	1	1	1	Beta-Casp	domain
KH_7	PF17214.3	gi|289595800|ref|YP_003482496.1|	-	9.2e-27	92.8	2.7	4.1e-23	81.1	0.4	2.7	2	0	0	2	2	2	2	KH	domain
RMMBL	PF07521.12	gi|289595800|ref|YP_003482496.1|	-	2e-16	59.7	0.0	4.3e-16	58.6	0.0	1.6	1	0	0	1	1	1	1	Zn-dependent	metallo-hydrolase	RNA	specificity	domain
Lactamase_B_6	PF16661.5	gi|289595800|ref|YP_003482496.1|	-	2.9e-14	53.0	0.1	8.5e-14	51.4	0.1	1.8	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|289595800|ref|YP_003482496.1|	-	6.1e-13	49.2	1.0	2.9e-12	47.0	1.0	2.1	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|289595800|ref|YP_003482496.1|	-	3.7e-08	33.1	0.1	7.5e-08	32.1	0.1	1.5	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
KH_2	PF07650.17	gi|289595800|ref|YP_003482496.1|	-	9e-05	22.2	0.2	0.00032	20.5	0.2	2.0	1	0	0	1	1	1	1	KH	domain
Lactamase_B_3	PF13483.6	gi|289595800|ref|YP_003482496.1|	-	0.04	13.8	0.0	0.077	12.9	0.0	1.4	1	0	0	1	1	1	0	Beta-lactamase	superfamily	domain
Proteasome	PF00227.26	gi|289595801|ref|YP_003482497.1|	-	3.1e-53	180.1	0.8	3.6e-53	179.9	0.8	1.0	1	0	0	1	1	1	1	Proteasome	subunit
ABC-3	PF00950.17	gi|289595802|ref|YP_003482498.1|	-	1.2e-46	159.3	40.3	1.5e-46	159.0	40.3	1.0	1	0	0	1	1	1	1	ABC	3	transport	family
FecCD	PF01032.18	gi|289595802|ref|YP_003482498.1|	-	0.00059	18.9	35.0	0.00059	18.9	35.0	1.6	1	1	0	1	1	1	1	FecCD	transport	family
DUF1440	PF07274.12	gi|289595802|ref|YP_003482498.1|	-	0.034	14.5	1.4	0.093	13.1	1.1	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1440)
ABC_tran	PF00005.27	gi|289595803|ref|YP_003482499.1|	-	1.5e-29	103.3	0.0	2.1e-29	102.8	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
SMC_N	PF02463.19	gi|289595803|ref|YP_003482499.1|	-	2.4e-08	33.7	0.2	5.9e-06	25.9	0.2	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_21	PF13304.6	gi|289595803|ref|YP_003482499.1|	-	2.7e-06	27.4	0.7	0.00021	21.2	0.1	2.1	1	1	0	2	2	2	1	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
ATPase_2	PF01637.18	gi|289595803|ref|YP_003482499.1|	-	1.6e-05	25.0	0.3	0.00036	20.5	0.3	2.1	1	1	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
AAA_23	PF13476.6	gi|289595803|ref|YP_003482499.1|	-	2.1e-05	25.2	0.0	3.2e-05	24.5	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_27	PF13514.6	gi|289595803|ref|YP_003482499.1|	-	0.0003	20.4	0.0	0.00053	19.6	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
RsgA_GTPase	PF03193.16	gi|289595803|ref|YP_003482499.1|	-	0.00052	20.0	0.3	0.00099	19.1	0.1	1.5	2	0	0	2	2	1	1	RsgA	GTPase
T2SSE	PF00437.20	gi|289595803|ref|YP_003482499.1|	-	0.0014	17.7	0.1	0.012	14.6	0.0	2.1	2	1	0	2	2	2	1	Type	II/IV	secretion	system	protein
AAA_22	PF13401.6	gi|289595803|ref|YP_003482499.1|	-	0.0016	18.7	0.0	0.0047	17.2	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
AAA_30	PF13604.6	gi|289595803|ref|YP_003482499.1|	-	0.0019	17.9	0.0	0.0044	16.8	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.6	gi|289595803|ref|YP_003482499.1|	-	0.0044	17.4	0.0	0.0053	17.2	0.0	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
SbcCD_C	PF13558.6	gi|289595803|ref|YP_003482499.1|	-	0.0047	17.1	0.1	0.075	13.3	0.1	2.1	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_15	PF13175.6	gi|289595803|ref|YP_003482499.1|	-	0.0073	16.1	0.1	0.012	15.4	0.1	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
cobW	PF02492.19	gi|289595803|ref|YP_003482499.1|	-	0.0086	15.7	0.2	0.018	14.7	0.2	1.5	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_29	PF13555.6	gi|289595803|ref|YP_003482499.1|	-	0.011	15.5	0.0	0.021	14.6	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_13	PF13166.6	gi|289595803|ref|YP_003482499.1|	-	0.013	14.2	0.0	1.1	7.8	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
NACHT	PF05729.12	gi|289595803|ref|YP_003482499.1|	-	0.018	15.0	0.4	0.035	14.0	0.2	1.6	2	0	0	2	2	1	0	NACHT	domain
AAA_19	PF13245.6	gi|289595803|ref|YP_003482499.1|	-	0.024	15.0	0.1	0.18	12.1	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
AAA_14	PF13173.6	gi|289595803|ref|YP_003482499.1|	-	0.024	14.7	0.0	0.31	11.1	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
AAA_33	PF13671.6	gi|289595803|ref|YP_003482499.1|	-	0.029	14.5	0.2	0.096	12.9	0.2	1.9	1	1	0	1	1	1	0	AAA	domain
MMR_HSR1	PF01926.23	gi|289595803|ref|YP_003482499.1|	-	0.035	14.2	0.1	0.069	13.2	0.1	1.7	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
Adeno_IVa2	PF02456.15	gi|289595803|ref|YP_003482499.1|	-	0.055	12.3	0.2	0.11	11.3	0.1	1.5	2	0	0	2	2	2	0	Adenovirus	IVa2	protein
ABC_ATPase	PF09818.9	gi|289595803|ref|YP_003482499.1|	-	0.055	12.2	0.3	4.1	6.1	0.1	2.1	2	0	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
NB-ARC	PF00931.22	gi|289595803|ref|YP_003482499.1|	-	0.059	12.6	1.3	0.33	10.1	0.0	2.2	2	1	0	2	2	2	0	NB-ARC	domain
Zeta_toxin	PF06414.12	gi|289595803|ref|YP_003482499.1|	-	0.059	12.6	0.0	0.11	11.8	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
AFG1_ATPase	PF03969.16	gi|289595803|ref|YP_003482499.1|	-	0.065	12.1	0.1	1.2	7.9	0.0	2.1	2	0	0	2	2	2	0	AFG1-like	ATPase
TsaE	PF02367.17	gi|289595803|ref|YP_003482499.1|	-	0.067	13.2	0.0	0.12	12.4	0.0	1.4	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
NTPase_1	PF03266.15	gi|289595803|ref|YP_003482499.1|	-	0.072	13.0	1.0	0.17	11.7	0.0	2.0	2	1	0	2	2	2	0	NTPase
AAA_24	PF13479.6	gi|289595803|ref|YP_003482499.1|	-	0.075	12.7	0.1	0.13	12.0	0.1	1.3	1	0	0	1	1	1	0	AAA	domain
Rad17	PF03215.15	gi|289595803|ref|YP_003482499.1|	-	0.076	12.9	0.0	0.18	11.7	0.0	1.6	2	0	0	2	2	2	0	Rad17	P-loop	domain
AAA	PF00004.29	gi|289595803|ref|YP_003482499.1|	-	0.085	13.3	1.2	0.31	11.4	1.1	2.1	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.12	gi|289595803|ref|YP_003482499.1|	-	0.1	12.4	0.2	1.4	8.6	0.0	2.2	2	0	0	2	2	2	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_5	PF07728.14	gi|289595803|ref|YP_003482499.1|	-	0.12	12.4	0.1	0.93	9.5	0.0	2.2	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
AAA_28	PF13521.6	gi|289595803|ref|YP_003482499.1|	-	0.17	12.1	0.0	0.37	11.0	0.0	1.6	2	0	0	2	2	1	0	AAA	domain
Fe_dep_repr_C	PF02742.15	gi|289595804|ref|YP_003482500.1|	-	4.8e-23	81.0	0.1	6.8e-23	80.5	0.1	1.2	1	0	0	1	1	1	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
Fe_dep_repress	PF01325.19	gi|289595804|ref|YP_003482500.1|	-	4.3e-10	39.6	0.2	8.9e-10	38.6	0.2	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
TrmB	PF01978.19	gi|289595804|ref|YP_003482500.1|	-	2.7e-05	24.0	0.1	4.7e-05	23.2	0.1	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_45	PF14947.6	gi|289595804|ref|YP_003482500.1|	-	0.00096	19.1	0.2	0.0014	18.5	0.2	1.4	1	1	0	1	1	1	1	Winged	helix-turn-helix
MarR	PF01047.22	gi|289595804|ref|YP_003482500.1|	-	0.0064	16.4	0.0	0.014	15.3	0.0	1.7	1	0	0	1	1	1	1	MarR	family
HTH_IclR	PF09339.10	gi|289595804|ref|YP_003482500.1|	-	0.042	13.6	0.0	0.14	12.0	0.0	1.9	2	0	0	2	2	2	0	IclR	helix-turn-helix	domain
HTH_36	PF13730.6	gi|289595804|ref|YP_003482500.1|	-	0.078	12.9	0.0	0.24	11.4	0.0	1.7	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_Crp_2	PF13545.6	gi|289595804|ref|YP_003482500.1|	-	0.095	12.7	0.0	0.18	11.8	0.0	1.5	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
PLDc_2	PF13091.6	gi|289595805|ref|YP_003482501.1|	-	1.2e-38	132.1	2.5	3.2e-26	91.8	0.1	2.3	2	0	0	2	2	2	2	PLD-like	domain
Regulator_TrmB	PF11495.8	gi|289595805|ref|YP_003482501.1|	-	2.7e-15	56.2	1.5	1.7e-10	40.5	0.0	2.7	2	1	0	2	2	2	2	Archaeal	transcriptional	regulator	TrmB
PLDc	PF00614.22	gi|289595805|ref|YP_003482501.1|	-	2.7e-10	40.0	3.5	3.7e-05	23.7	0.2	2.7	2	0	0	2	2	2	2	Phospholipase	D	Active	site	motif
FAM83	PF07894.12	gi|289595805|ref|YP_003482501.1|	-	0.0036	16.9	0.8	0.82	9.2	0.8	2.4	1	1	0	1	1	1	1	FAM83	A-H
PQQ_3	PF13570.6	gi|289595805|ref|YP_003482501.1|	-	0.01	16.3	0.5	5.9	7.5	0.2	2.8	2	0	0	2	2	2	0	PQQ-like	domain
PP_kinase_C	PF13090.6	gi|289595805|ref|YP_003482501.1|	-	0.01	15.3	0.0	0.024	14.1	0.0	1.5	1	0	0	1	1	1	0	Polyphosphate	kinase	C-terminal	domain	2
MCM_N	PF14551.6	gi|289595805|ref|YP_003482501.1|	-	0.011	16.4	0.6	6.7	7.4	0.0	2.4	2	0	0	2	2	2	0	MCM	N-terminal	domain
PP_kinase_C_1	PF17941.1	gi|289595805|ref|YP_003482501.1|	-	0.014	14.9	1.0	0.16	11.5	0.1	2.3	2	0	0	2	2	2	0	Polyphosphate	kinase	C-terminal	domain	1
GPI-anchored	PF10342.9	gi|289595805|ref|YP_003482501.1|	-	0.39	11.5	7.8	1.7	9.5	0.2	3.6	3	0	0	3	3	3	0	Ser-Thr-rich	glycosyl-phosphatidyl-inositol-anchored	membrane	family
Aconitase_C	PF00694.19	gi|289595806|ref|YP_003482502.1|	-	7.7e-19	68.3	0.0	1e-18	68.0	0.0	1.2	1	0	0	1	1	1	1	Aconitase	C-terminal	domain
Aconitase_2_N	PF06434.13	gi|289595806|ref|YP_003482502.1|	-	0.00067	19.3	0.3	0.031	13.9	0.3	2.2	1	1	0	1	1	1	1	Aconitate	hydratase	2	N-terminus
MazE_antitoxin	PF04014.18	gi|289595806|ref|YP_003482502.1|	-	0.2	11.7	2.0	0.88	9.6	0.2	2.7	3	0	0	3	3	3	0	Antidote-toxin	recognition	MazE,	bacterial	antitoxin
Aconitase	PF00330.20	gi|289595807|ref|YP_003482503.1|	-	5.5e-101	338.9	3.3	5.3e-99	332.3	3.3	2.3	1	1	0	1	1	1	1	Aconitase	family	(aconitate	hydratase)
DUF521	PF04412.13	gi|289595807|ref|YP_003482503.1|	-	0.00012	21.0	0.0	0.00017	20.4	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF521)
PIN_6	PF17146.4	gi|289595808|ref|YP_003482504.1|	-	1.1e-15	57.9	0.0	2.3e-15	56.8	0.0	1.5	1	1	0	1	1	1	1	PIN	domain	of	ribonuclease
PIN_5	PF08745.11	gi|289595808|ref|YP_003482504.1|	-	3.7e-07	29.8	0.4	1.2e-05	24.9	0.1	2.3	2	1	0	2	2	2	1	PINc	domain	ribonuclease
PIN	PF01850.21	gi|289595808|ref|YP_003482504.1|	-	0.00076	20.0	0.2	0.0042	17.6	0.1	1.8	1	1	1	2	2	2	1	PIN	domain
HypA	PF01155.19	gi|289595808|ref|YP_003482504.1|	-	0.0016	18.5	0.4	0.0026	17.8	0.4	1.4	1	1	0	1	1	1	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Zn-ribbon_8	PF09723.10	gi|289595808|ref|YP_003482504.1|	-	0.0055	16.8	3.4	0.019	15.0	3.4	1.8	1	1	0	1	1	1	1	Zinc	ribbon	domain
PIN_2	PF10130.9	gi|289595808|ref|YP_003482504.1|	-	0.0067	16.7	0.1	0.011	16.0	0.1	1.4	1	1	0	1	1	1	1	PIN	domain
zinc-ribbons_6	PF07191.12	gi|289595808|ref|YP_003482504.1|	-	0.0084	16.1	0.7	0.015	15.3	0.7	1.3	1	0	0	1	1	1	1	zinc-ribbons
zinc_ribbon_15	PF17032.5	gi|289595808|ref|YP_003482504.1|	-	0.019	15.7	0.3	0.03	15.1	0.3	1.3	1	0	0	1	1	1	0	zinc-ribbon	family
DUF1272	PF06906.11	gi|289595808|ref|YP_003482504.1|	-	0.02	15.0	0.4	0.037	14.1	0.4	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1272)
NOB1_Zn_bind	PF08772.11	gi|289595808|ref|YP_003482504.1|	-	0.022	14.9	2.3	0.036	14.2	2.3	1.4	1	0	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
Zn_ribbon_SprT	PF17283.2	gi|289595808|ref|YP_003482504.1|	-	0.035	14.0	2.5	0.035	14.0	2.5	2.2	2	0	0	2	2	2	0	SprT-like	zinc	ribbon	domain
DUF2597	PF10772.9	gi|289595808|ref|YP_003482504.1|	-	0.053	13.6	0.0	0.073	13.1	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2597)
DZR	PF12773.7	gi|289595808|ref|YP_003482504.1|	-	0.066	13.2	0.6	0.12	12.5	0.6	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
DNA_ligase_ZBD	PF03119.16	gi|289595808|ref|YP_003482504.1|	-	0.13	12.3	2.5	0.24	11.5	0.4	2.3	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-IS66	PF13005.7	gi|289595808|ref|YP_003482504.1|	-	0.34	11.3	4.3	0.77	10.2	0.2	2.5	2	0	0	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
zinc_ribbon_5	PF13719.6	gi|289595808|ref|YP_003482504.1|	-	0.57	10.0	4.1	8	6.3	0.9	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
Rad50_zn_hook	PF04423.14	gi|289595808|ref|YP_003482504.1|	-	0.6	10.0	0.1	0.6	10.0	0.1	2.1	2	1	0	2	2	2	0	Rad50	zinc	hook	motif
OrfB_Zn_ribbon	PF07282.11	gi|289595808|ref|YP_003482504.1|	-	0.89	9.5	4.3	12	5.9	0.5	2.3	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
ADK_lid	PF05191.14	gi|289595808|ref|YP_003482504.1|	-	1.3	9.1	4.6	4	7.5	4.6	1.8	1	1	0	1	1	1	0	Adenylate	kinase,	active	site	lid
zf-C2H2_4	PF13894.6	gi|289595808|ref|YP_003482504.1|	-	1.3	10.1	4.0	34	5.6	0.7	2.5	2	0	0	2	2	2	0	C2H2-type	zinc	finger
Rubredoxin_2	PF18073.1	gi|289595808|ref|YP_003482504.1|	-	5	6.9	11.5	1.6	8.5	3.6	2.0	1	1	1	2	2	2	0	Rubredoxin	metal	binding	domain
zf-NADH-PPase	PF09297.11	gi|289595808|ref|YP_003482504.1|	-	6.6	6.5	8.5	11	5.8	0.4	2.6	3	0	0	3	3	3	0	NADH	pyrophosphatase	zinc	ribbon	domain
NTP_transf_2	PF01909.23	gi|289595809|ref|YP_003482505.1|	-	6.7e-10	39.1	1.1	3.9e-09	36.7	0.1	2.6	2	0	0	2	2	2	1	Nucleotidyltransferase	domain
Polbeta	PF18765.1	gi|289595809|ref|YP_003482505.1|	-	2e-07	31.0	0.1	2e-07	31.0	0.1	4.0	4	2	0	4	4	4	1	Polymerase	beta,	Nucleotidyltransferase
Alpha-amyl_C2	PF07821.12	gi|289595809|ref|YP_003482505.1|	-	0.047	13.9	0.1	0.094	13.0	0.1	1.5	1	0	0	1	1	1	0	Alpha-amylase	C-terminal	beta-sheet	domain
RlaP	PF10127.9	gi|289595809|ref|YP_003482505.1|	-	0.087	12.4	0.5	0.25	10.9	0.0	2.0	2	1	1	3	3	3	0	RNA	repair	pathway	DNA	polymerase	beta	family
DNA_pol_B_palm	PF14792.6	gi|289595809|ref|YP_003482505.1|	-	0.15	12.3	1.9	6.5	7.0	0.0	3.0	3	0	0	3	3	3	0	DNA	polymerase	beta	palm
DUF86	PF01934.17	gi|289595809|ref|YP_003482505.1|	-	0.51	10.2	6.3	0.56	10.1	0.2	2.7	2	1	0	2	2	2	0	Protein	of	unknown	function	DUF86
Binary_toxB	PF03495.14	gi|289595810|ref|YP_003482506.1|	-	0.00014	22.0	7.1	0.77	10.0	0.2	4.2	3	1	1	4	4	4	3	Clostridial	binary	toxin	B/anthrax	toxin	PA	Ca-binding	domain
ETRAMP	PF09716.10	gi|289595810|ref|YP_003482506.1|	-	0.026	14.6	0.0	0.089	12.9	0.0	2.0	1	0	0	1	1	1	0	Malarial	early	transcribed	membrane	protein	(ETRAMP)
Excalibur	PF05901.11	gi|289595810|ref|YP_003482506.1|	-	0.12	13.0	0.7	78	4.0	0.1	3.4	3	0	0	3	3	3	0	Excalibur	calcium-binding	domain
DUF234	PF03008.14	gi|289595811|ref|YP_003482507.1|	-	1.5e-23	83.1	2.2	1.5e-23	83.1	2.2	2.5	3	1	0	3	3	2	1	Archaea	bacterial	proteins	of	unknown	function
ATPase_2	PF01637.18	gi|289595811|ref|YP_003482507.1|	-	4.5e-14	52.9	1.2	1.5e-12	48.0	1.2	2.4	1	1	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
AAA_14	PF13173.6	gi|289595811|ref|YP_003482507.1|	-	1.6e-08	34.6	0.1	4.4e-08	33.2	0.1	1.8	1	0	0	1	1	1	1	AAA	domain
Mrr_cat	PF04471.12	gi|289595811|ref|YP_003482507.1|	-	3.6e-08	33.4	0.0	7.1e-08	32.5	0.0	1.5	1	0	0	1	1	1	1	Restriction	endonuclease
AAA_16	PF13191.6	gi|289595811|ref|YP_003482507.1|	-	6.5e-07	29.9	1.3	7.5e-06	26.4	0.1	2.5	1	1	1	2	2	2	1	AAA	ATPase	domain
AAA_22	PF13401.6	gi|289595811|ref|YP_003482507.1|	-	5e-06	26.8	0.1	2.3e-05	24.7	0.1	2.1	1	1	0	1	1	1	1	AAA	domain
DUF4143	PF13635.6	gi|289595811|ref|YP_003482507.1|	-	2.1e-05	24.6	0.0	4.1e-05	23.7	0.0	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
UPF0102	PF02021.17	gi|289595811|ref|YP_003482507.1|	-	4.6e-05	23.6	1.0	0.00012	22.2	0.6	2.0	2	0	0	2	2	2	1	Uncharacterised	protein	family	UPF0102
TniB	PF05621.11	gi|289595811|ref|YP_003482507.1|	-	0.00024	20.5	0.8	0.021	14.2	0.9	3.0	2	1	0	2	2	2	1	Bacterial	TniB	protein
HTH_45	PF14947.6	gi|289595811|ref|YP_003482507.1|	-	0.0011	18.9	0.0	0.0028	17.6	0.0	1.7	1	0	0	1	1	1	1	Winged	helix-turn-helix
GerE	PF00196.19	gi|289595811|ref|YP_003482507.1|	-	0.0052	16.3	0.1	1.5	8.4	0.1	2.4	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	luxR	family
AAA_24	PF13479.6	gi|289595811|ref|YP_003482507.1|	-	0.012	15.4	0.0	0.02	14.6	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
YcxB	PF14317.6	gi|289595811|ref|YP_003482507.1|	-	0.012	15.3	0.3	0.45	10.3	0.1	2.5	2	0	0	2	2	2	0	YcxB-like	protein
TrmB	PF01978.19	gi|289595811|ref|YP_003482507.1|	-	0.023	14.6	0.3	0.11	12.4	0.0	2.1	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.10	gi|289595811|ref|YP_003482507.1|	-	0.024	14.4	0.0	0.051	13.4	0.0	1.5	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_24	PF13412.6	gi|289595811|ref|YP_003482507.1|	-	0.028	14.0	0.0	0.076	12.6	0.0	1.8	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
HTH_5	PF01022.20	gi|289595811|ref|YP_003482507.1|	-	0.034	14.0	0.0	0.079	12.8	0.0	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
Rrf2	PF02082.20	gi|289595811|ref|YP_003482507.1|	-	0.11	12.8	0.0	0.91	9.9	0.0	2.3	2	0	0	2	2	2	0	Transcriptional	regulator
NosD	PF05048.13	gi|289595812|ref|YP_003482508.1|	-	1.2e-62	211.3	174.8	1.1e-26	93.5	53.6	6.2	3	1	3	6	6	6	4	Periplasmic	copper-binding	protein	(NosD)
Beta_helix	PF13229.6	gi|289595812|ref|YP_003482508.1|	-	4.3e-57	192.4	244.5	4.5e-21	75.4	55.7	7.7	5	1	4	9	9	9	5	Right	handed	beta	helix	region
fn3	PF00041.21	gi|289595812|ref|YP_003482508.1|	-	4.2e-22	78.3	29.5	4.4e-05	23.8	1.3	6.5	5	4	0	5	5	5	4	Fibronectin	type	III	domain
Pectate_lyase_3	PF12708.7	gi|289595812|ref|YP_003482508.1|	-	0.00014	21.8	107.6	0.011	15.6	10.9	7.6	5	2	2	7	7	7	5	Pectate	lyase	superfamily	protein
Peptidase_C1_2	PF03051.15	gi|289595812|ref|YP_003482508.1|	-	0.0013	17.6	0.2	0.0025	16.7	0.2	1.4	1	0	0	1	1	1	1	Peptidase	C1-like	family
NPCBM_assoc	PF10633.9	gi|289595812|ref|YP_003482508.1|	-	0.082	13.2	0.0	0.43	10.9	0.0	2.3	1	0	0	1	1	1	0	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
Big_10	PF17964.1	gi|289595812|ref|YP_003482508.1|	-	0.64	10.0	7.7	6.5	6.7	0.6	4.1	4	0	0	4	4	4	0	Bacterial	Ig	domain
DUF3972	PF13118.6	gi|289595813|ref|YP_003482509.1|	-	0.00095	19.6	4.1	0.0029	18.0	4.1	1.8	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3972)
DUF4795	PF16043.5	gi|289595813|ref|YP_003482509.1|	-	0.012	15.2	14.8	0.031	13.9	14.8	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4795)
MscS_porin	PF12795.7	gi|289595813|ref|YP_003482509.1|	-	0.05	13.1	6.8	0.096	12.2	6.8	1.4	1	0	0	1	1	1	0	Mechanosensitive	ion	channel	porin	domain
DUF4407	PF14362.6	gi|289595813|ref|YP_003482509.1|	-	0.056	12.8	4.7	0.081	12.3	4.7	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
HrpB7	PF09486.10	gi|289595813|ref|YP_003482509.1|	-	0.11	12.9	2.1	0.17	12.3	2.1	1.3	1	0	0	1	1	1	0	Bacterial	type	III	secretion	protein	(HrpB7)
OmpH	PF03938.14	gi|289595813|ref|YP_003482509.1|	-	0.12	12.7	24.3	0.55	10.6	21.4	2.9	2	1	0	2	2	2	0	Outer	membrane	protein	(OmpH-like)
Cep57_MT_bd	PF06657.13	gi|289595813|ref|YP_003482509.1|	-	0.15	12.5	6.3	0.45	11.0	6.3	1.9	1	0	0	1	1	1	0	Centrosome	microtubule-binding	domain	of	Cep57
TSC22	PF01166.18	gi|289595813|ref|YP_003482509.1|	-	0.2	12.0	5.6	0.54	10.6	5.6	1.7	1	0	0	1	1	1	0	TSC-22/dip/bun	family
DUF4140	PF13600.6	gi|289595813|ref|YP_003482509.1|	-	0.23	11.9	2.6	0.54	10.7	2.6	1.6	1	0	0	1	1	1	0	N-terminal	domain	of	unknown	function	(DUF4140)
EMP24_GP25L	PF01105.24	gi|289595813|ref|YP_003482509.1|	-	0.44	10.5	4.9	0.26	11.2	1.6	2.2	2	0	0	2	2	2	0	emp24/gp25L/p24	family/GOLD
YabA	PF06156.13	gi|289595813|ref|YP_003482509.1|	-	0.5	11.0	8.7	1.8	9.3	8.3	2.3	2	0	0	2	2	2	0	Initiation	control	protein	YabA
IFP_35_N	PF07334.13	gi|289595813|ref|YP_003482509.1|	-	0.56	10.3	8.1	2.3	8.4	8.1	2.1	1	0	0	1	1	1	0	Interferon-induced	35	kDa	protein	(IFP	35)	N-terminus
DivIC	PF04977.15	gi|289595813|ref|YP_003482509.1|	-	0.72	9.7	8.3	2.3	8.0	8.3	1.9	1	0	0	1	1	1	0	Septum	formation	initiator
Syntaxin-6_N	PF09177.11	gi|289595813|ref|YP_003482509.1|	-	0.8	10.3	7.7	1.2	9.7	6.5	1.9	1	1	0	1	1	1	0	Syntaxin	6,	N-terminal
DUF5320	PF17253.2	gi|289595813|ref|YP_003482509.1|	-	0.96	10.6	2.3	3.1	8.9	2.3	1.9	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5320)
Exonuc_VII_L	PF02601.15	gi|289595813|ref|YP_003482509.1|	-	1.1	8.8	4.0	1.5	8.3	4.0	1.2	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
FliJ	PF02050.16	gi|289595813|ref|YP_003482509.1|	-	1.4	9.1	14.3	0.51	10.6	10.2	2.1	1	1	0	2	2	2	0	Flagellar	FliJ	protein
DUF641	PF04859.12	gi|289595813|ref|YP_003482509.1|	-	2.3	8.6	11.5	2	8.7	9.3	2.1	1	1	0	1	1	1	0	Plant	protein	of	unknown	function	(DUF641)
betaPIX_CC	PF16523.5	gi|289595813|ref|YP_003482509.1|	-	2.3	8.1	15.4	3.2	7.7	0.1	2.9	2	1	0	2	2	2	0	betaPIX	coiled	coil
FapA	PF03961.13	gi|289595813|ref|YP_003482509.1|	-	2.7	6.5	17.9	6.2	5.3	17.8	1.6	1	1	0	1	1	1	0	Flagellar	Assembly	Protein	A
PKcGMP_CC	PF16808.5	gi|289595813|ref|YP_003482509.1|	-	5.5	6.9	19.5	0.26	11.2	13.4	2.1	2	0	0	2	2	1	0	Coiled-coil	N-terminus	of	cGMP-dependent	protein	kinase
zinc_ribbon_15	PF17032.5	gi|289595814|ref|YP_003482510.1|	-	2e-06	28.4	0.2	5.3e-06	27.1	0.1	1.7	2	0	0	2	2	2	1	zinc-ribbon	family
zinc_ribbon_2	PF13240.6	gi|289595814|ref|YP_003482510.1|	-	3.3e-06	26.6	6.1	5.7e-06	25.9	6.1	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|289595814|ref|YP_003482510.1|	-	4.8e-06	26.5	0.0	7.1e-06	25.9	0.0	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-ribbon_3	PF13248.6	gi|289595814|ref|YP_003482510.1|	-	5.3e-06	25.7	2.3	7.9e-06	25.1	2.3	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-LITAF-like	PF10601.9	gi|289595814|ref|YP_003482510.1|	-	0.0024	18.1	1.0	0.15	12.3	1.0	2.5	1	1	0	1	1	1	1	LITAF-like	zinc	ribbon	domain
Peptidase_C71	PF12386.8	gi|289595814|ref|YP_003482510.1|	-	0.011	15.4	0.0	0.026	14.2	0.0	1.6	1	0	0	1	1	1	0	Pseudomurein	endo-isopeptidase	Pei
Transglut_core	PF01841.19	gi|289595814|ref|YP_003482510.1|	-	0.044	14.2	0.0	0.099	13.1	0.0	1.6	1	0	0	1	1	1	0	Transglutaminase-like	superfamily
DUF553	PF04473.12	gi|289595814|ref|YP_003482510.1|	-	0.046	13.2	0.0	0.081	12.5	0.0	1.4	1	0	0	1	1	1	0	Transglutaminase-like	domain
NRDD	PF13597.6	gi|289595814|ref|YP_003482510.1|	-	0.091	11.5	0.9	0.14	10.9	0.9	1.2	1	0	0	1	1	1	0	Anaerobic	ribonucleoside-triphosphate	reductase
UPF0547	PF10571.9	gi|289595814|ref|YP_003482510.1|	-	0.092	12.8	3.3	0.23	11.6	3.3	1.6	1	1	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
Prok-RING_1	PF14446.6	gi|289595814|ref|YP_003482510.1|	-	0.25	11.3	1.5	0.47	10.4	1.5	1.4	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
zf-NADH-PPase	PF09297.11	gi|289595814|ref|YP_003482510.1|	-	0.38	10.4	2.6	5.7	6.7	0.2	2.4	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
Rubredoxin_2	PF18073.1	gi|289595814|ref|YP_003482510.1|	-	0.94	9.3	4.5	2.2	8.1	4.5	1.6	1	0	0	1	1	1	0	Rubredoxin	metal	binding	domain
TF_Zn_Ribbon	PF08271.12	gi|289595814|ref|YP_003482510.1|	-	3.3	7.3	5.9	6.1	6.4	0.3	2.2	1	1	0	1	1	1	0	TFIIB	zinc-binding
zinc_ribbon_2	PF13240.6	gi|289595815|ref|YP_003482511.1|	-	7e-07	28.8	1.4	1e-06	28.2	1.4	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|289595815|ref|YP_003482511.1|	-	1.8e-05	24.7	0.2	2.6e-05	24.1	0.2	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_15	PF17032.5	gi|289595815|ref|YP_003482511.1|	-	0.00017	22.3	0.0	0.00022	21.9	0.0	1.4	1	0	0	1	1	1	1	zinc-ribbon	family
UPF0547	PF10571.9	gi|289595815|ref|YP_003482511.1|	-	0.00038	20.5	1.4	0.00059	19.9	1.4	1.2	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
zf-ribbon_3	PF13248.6	gi|289595815|ref|YP_003482511.1|	-	0.00042	19.6	1.2	0.0006	19.1	1.2	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
SdrG_C_C	PF10425.9	gi|289595815|ref|YP_003482511.1|	-	0.023	14.8	1.3	0.033	14.3	1.3	1.2	1	0	0	1	1	1	0	C-terminus	of	bacterial	fibrinogen-binding	adhesin
PPC	PF04151.15	gi|289595815|ref|YP_003482511.1|	-	0.066	14.3	0.1	0.15	13.2	0.1	1.7	1	0	0	1	1	1	0	Bacterial	pre-peptidase	C-terminal	domain
zf-C3HC4_3	PF13920.6	gi|289595815|ref|YP_003482511.1|	-	0.17	11.7	1.4	0.32	10.9	1.4	1.4	1	1	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
Rad50_zn_hook	PF04423.14	gi|289595815|ref|YP_003482511.1|	-	6.5	6.7	5.4	5	7.0	0.6	2.1	1	1	1	2	2	2	0	Rad50	zinc	hook	motif
DDE_Tnp_1	PF01609.21	gi|289595816|ref|YP_003482512.1|	-	1.3e-22	80.6	0.3	2.5e-22	79.6	0.3	1.5	1	0	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1_6	PF13751.6	gi|289595816|ref|YP_003482512.1|	-	0.0028	17.9	0.1	0.0078	16.4	0.0	1.8	2	0	0	2	2	2	1	Transposase	DDE	domain
DUF772	PF05598.11	gi|289595816|ref|YP_003482512.1|	-	0.01	15.8	0.3	0.022	14.7	0.3	1.5	1	0	0	1	1	1	0	Transposase	domain	(DUF772)
PKD	PF00801.20	gi|289595818|ref|YP_003482514.1|	-	9.7e-13	47.8	32.8	3.5e-08	33.2	1.3	7.5	7	0	0	7	7	5	3	PKD	domain
DUF1664	PF07889.12	gi|289595818|ref|YP_003482514.1|	-	1.5e-09	37.9	11.0	0.00068	19.7	1.8	3.8	1	1	4	5	5	5	5	Protein	of	unknown	function	(DUF1664)
Baculo_PEP_C	PF04513.12	gi|289595818|ref|YP_003482514.1|	-	8.8e-09	35.5	44.6	0.00011	22.3	18.3	3.5	1	1	2	3	3	3	3	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
AAA_13	PF13166.6	gi|289595818|ref|YP_003482514.1|	-	7.6e-07	28.2	5.5	4.2e-06	25.7	3.7	1.8	1	1	1	2	2	2	1	AAA	domain
NPV_P10	PF05531.12	gi|289595818|ref|YP_003482514.1|	-	2.3e-06	27.9	27.3	0.015	15.7	1.9	4.5	1	1	3	4	4	4	2	Nucleopolyhedrovirus	P10	protein
XhlA	PF10779.9	gi|289595818|ref|YP_003482514.1|	-	2.8e-06	27.4	18.4	0.014	15.6	0.4	4.6	4	1	0	4	4	4	2	Haemolysin	XhlA
ATG16	PF08614.11	gi|289595818|ref|YP_003482514.1|	-	3.4e-06	27.4	0.0	0.00014	22.2	0.0	2.1	1	1	1	2	2	2	1	Autophagy	protein	16	(ATG16)
Spc7	PF08317.11	gi|289595818|ref|YP_003482514.1|	-	4.2e-06	25.9	0.0	0.00017	20.6	0.1	2.3	1	1	1	2	2	2	1	Spc7	kinetochore	protein
MscS_porin	PF12795.7	gi|289595818|ref|YP_003482514.1|	-	7.3e-06	25.7	2.8	0.016	14.8	1.3	2.8	1	1	2	3	3	3	2	Mechanosensitive	ion	channel	porin	domain
FlaC_arch	PF05377.11	gi|289595818|ref|YP_003482514.1|	-	2.1e-05	24.8	9.2	1.3	9.5	0.5	5.6	1	1	5	6	6	6	1	Flagella	accessory	protein	C	(FlaC)
CENP-F_leu_zip	PF10473.9	gi|289595818|ref|YP_003482514.1|	-	3e-05	24.1	0.0	0.62	10.1	0.0	3.0	1	1	3	4	4	4	2	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Laminin_II	PF06009.12	gi|289595818|ref|YP_003482514.1|	-	4.2e-05	23.6	12.6	0.021	14.8	2.1	3.4	1	1	1	2	2	2	2	Laminin	Domain	II
Cast	PF10174.9	gi|289595818|ref|YP_003482514.1|	-	0.00011	20.7	0.3	0.00016	20.1	0.3	1.1	1	0	0	1	1	1	1	RIM-binding	protein	of	the	cytomatrix	active	zone
EzrA	PF06160.12	gi|289595818|ref|YP_003482514.1|	-	0.00012	20.4	5.5	0.0047	15.2	0.5	2.2	2	1	1	3	3	2	2	Septation	ring	formation	regulator,	EzrA
Fez1	PF06818.15	gi|289595818|ref|YP_003482514.1|	-	0.00016	22.2	0.0	0.02	15.4	0.0	2.1	1	1	1	2	2	2	1	Fez1
COG5	PF10392.9	gi|289595818|ref|YP_003482514.1|	-	0.00023	21.4	0.2	6.3	7.0	0.0	3.4	1	1	2	3	3	3	0	Golgi	transport	complex	subunit	5
DUF3450	PF11932.8	gi|289595818|ref|YP_003482514.1|	-	0.00024	20.5	0.1	0.041	13.2	0.2	2.3	1	1	2	3	3	3	3	Protein	of	unknown	function	(DUF3450)
Fib_alpha	PF08702.10	gi|289595818|ref|YP_003482514.1|	-	0.00026	21.2	9.1	0.00089	19.5	4.6	2.7	1	1	0	2	2	2	1	Fibrinogen	alpha/beta	chain	family
Filament	PF00038.21	gi|289595818|ref|YP_003482514.1|	-	0.00028	20.6	0.0	0.0074	15.9	0.0	2.3	1	1	0	2	2	2	1	Intermediate	filament	protein
IFT57	PF10498.9	gi|289595818|ref|YP_003482514.1|	-	0.00029	19.9	5.8	0.12	11.3	1.2	2.1	1	1	1	2	2	2	2	Intra-flagellar	transport	protein	57
TMPIT	PF07851.13	gi|289595818|ref|YP_003482514.1|	-	0.00042	19.7	1.3	0.005	16.1	0.1	2.5	2	1	1	3	3	2	1	TMPIT-like	protein
ADIP	PF11559.8	gi|289595818|ref|YP_003482514.1|	-	0.001	19.2	0.1	0.54	10.3	0.2	2.3	1	1	1	2	2	2	2	Afadin-	and	alpha	-actinin-Binding
Y_Y_Y	PF07495.13	gi|289595818|ref|YP_003482514.1|	-	0.0012	18.8	30.2	0.017	15.0	9.4	5.2	5	0	0	5	5	4	2	Y_Y_Y	domain
DUF724	PF05266.14	gi|289595818|ref|YP_003482514.1|	-	0.0018	18.1	0.0	0.062	13.1	0.0	2.1	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF724)
Prefoldin_2	PF01920.20	gi|289595818|ref|YP_003482514.1|	-	0.0025	17.8	0.6	0.038	13.9	0.3	2.9	2	1	1	3	3	2	1	Prefoldin	subunit
DUF5082	PF16888.5	gi|289595818|ref|YP_003482514.1|	-	0.0026	18.0	16.8	1.9	8.8	1.1	4.4	1	1	1	3	3	3	1	Domain	of	unknown	function	(DUF5082)
FPP	PF05911.11	gi|289595818|ref|YP_003482514.1|	-	0.003	15.9	0.0	0.0043	15.3	0.0	1.1	1	0	0	1	1	1	1	Filament-like	plant	protein,	long	coiled-coil
Prefoldin	PF02996.17	gi|289595818|ref|YP_003482514.1|	-	0.0032	17.4	3.7	2	8.4	0.1	3.9	2	1	3	5	5	4	1	Prefoldin	subunit
WEMBL	PF05701.11	gi|289595818|ref|YP_003482514.1|	-	0.0034	16.1	0.0	0.005	15.6	0.0	1.1	1	0	0	1	1	1	1	Weak	chloroplast	movement	under	blue	light
DUF2730	PF10805.8	gi|289595818|ref|YP_003482514.1|	-	0.004	17.2	3.7	1.5	8.9	0.3	3.8	1	1	1	3	3	3	1	Protein	of	unknown	function	(DUF2730)
Pilin_N	PF07790.11	gi|289595818|ref|YP_003482514.1|	-	0.0042	18.0	2.3	0.31	12.0	0.0	3.7	2	0	0	2	2	2	1	Archaeal	Type	IV	pilin,	N-terminal
HsbA	PF12296.8	gi|289595818|ref|YP_003482514.1|	-	0.0045	17.4	42.5	0.5	10.8	9.2	5.4	1	1	0	3	3	3	2	Hydrophobic	surface	binding	protein	A
Sec3_C	PF09763.9	gi|289595818|ref|YP_003482514.1|	-	0.0087	14.5	5.3	0.0085	14.5	3.3	1.7	1	1	1	2	2	2	1	Exocyst	complex	component	Sec3
Myosin_tail_1	PF01576.19	gi|289595818|ref|YP_003482514.1|	-	0.0094	13.8	0.0	0.013	13.3	0.0	1.1	1	0	0	1	1	1	1	Myosin	tail
COG2	PF06148.11	gi|289595818|ref|YP_003482514.1|	-	0.01	15.9	0.7	6.1	6.9	0.0	3.0	1	1	2	3	3	3	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
SHE3	PF17078.5	gi|289595818|ref|YP_003482514.1|	-	0.012	15.3	0.1	0.024	14.3	0.1	1.4	1	0	0	1	1	1	0	SWI5-dependent	HO	expression	protein	3
Atg14	PF10186.9	gi|289595818|ref|YP_003482514.1|	-	0.013	14.6	0.1	0.03	13.4	0.1	1.6	1	1	0	1	1	1	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
CLZ	PF16526.5	gi|289595818|ref|YP_003482514.1|	-	0.016	15.5	1.4	2.9	8.3	0.0	3.8	3	1	2	5	5	4	0	C-terminal	leucine	zipper	domain	of	cyclic	nucleotide-gated	channels
FmiP_Thoc5	PF09766.9	gi|289595818|ref|YP_003482514.1|	-	0.017	14.4	0.2	7.5	5.7	0.0	2.9	1	1	2	3	3	3	0	Fms-interacting	protein/Thoc5
LPP	PF04728.13	gi|289595818|ref|YP_003482514.1|	-	0.018	15.4	7.8	13	6.2	0.1	4.9	2	1	3	5	5	5	0	Lipoprotein	leucine-zipper
DUF4618	PF15397.6	gi|289595818|ref|YP_003482514.1|	-	0.019	14.4	0.2	1.6	8.1	0.1	2.4	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4618)
CALCOCO1	PF07888.11	gi|289595818|ref|YP_003482514.1|	-	0.023	13.6	0.0	0.034	13.0	0.0	1.1	1	0	0	1	1	1	0	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
TBK1_CCD1	PF18394.1	gi|289595818|ref|YP_003482514.1|	-	0.025	14.1	3.2	10	5.6	0.1	3.2	1	1	2	3	3	3	0	TANK-binding	kinase	1	coiled-coil	domain	1
Cluap1	PF10234.9	gi|289595818|ref|YP_003482514.1|	-	0.025	14.0	1.3	0.73	9.2	0.1	2.3	2	1	1	3	3	2	0	Clusterin-associated	protein-1
RmuC	PF02646.16	gi|289595818|ref|YP_003482514.1|	-	0.031	13.4	3.3	1.1	8.4	0.2	2.9	1	1	2	3	3	3	0	RmuC	family
Mer2	PF09074.10	gi|289595818|ref|YP_003482514.1|	-	0.035	13.9	7.4	0.067	13.0	7.4	1.4	1	0	0	1	1	1	0	Mer2
DUF4625	PF15418.6	gi|289595818|ref|YP_003482514.1|	-	0.036	14.3	0.3	4.1	7.7	0.1	3.2	3	0	0	3	3	2	0	Domain	of	unknown	function	(DUF4625)
AIP3	PF03915.13	gi|289595818|ref|YP_003482514.1|	-	0.038	13.1	3.1	0.085	11.9	2.9	1.6	1	1	0	1	1	1	0	Actin	interacting	protein	3
DUF4201	PF13870.6	gi|289595818|ref|YP_003482514.1|	-	0.042	13.6	0.1	0.15	11.8	0.0	1.7	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4201)
GCN5L1	PF06320.13	gi|289595818|ref|YP_003482514.1|	-	0.044	13.9	2.3	0.35	11.0	0.5	2.5	1	1	1	2	2	2	0	GCN5-like	protein	1	(GCN5L1)
Tup_N	PF08581.10	gi|289595818|ref|YP_003482514.1|	-	0.045	14.1	0.0	8.8	6.7	0.0	2.8	1	1	2	3	3	3	0	Tup	N-terminal
GAS	PF13851.6	gi|289595818|ref|YP_003482514.1|	-	0.047	13.0	0.0	0.25	10.7	0.0	1.8	1	1	1	2	2	2	0	Growth-arrest	specific	micro-tubule	binding
HMMR_N	PF15905.5	gi|289595818|ref|YP_003482514.1|	-	0.047	13.1	0.2	0.081	12.4	0.2	1.4	1	0	0	1	1	1	0	Hyaluronan	mediated	motility	receptor	N-terminal
BST2	PF16716.5	gi|289595818|ref|YP_003482514.1|	-	0.051	14.2	0.2	6.1	7.5	0.0	2.5	1	1	1	2	2	2	0	Bone	marrow	stromal	antigen	2
DUF812	PF05667.11	gi|289595818|ref|YP_003482514.1|	-	0.06	12.2	0.1	0.29	10.0	0.1	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF812)
KxDL	PF10241.9	gi|289595818|ref|YP_003482514.1|	-	0.073	13.4	1.0	39	4.6	0.0	3.4	1	1	1	3	3	3	0	Uncharacterized	conserved	protein
WXG100	PF06013.12	gi|289595818|ref|YP_003482514.1|	-	0.085	13.1	6.4	23	5.3	0.3	3.9	2	1	2	4	4	4	0	Proteins	of	100	residues	with	WXG
MT	PF12777.7	gi|289595818|ref|YP_003482514.1|	-	0.11	11.6	4.4	0.68	8.9	0.7	2.4	1	1	2	3	3	3	0	Microtubule-binding	stalk	of	dynein	motor
MAD	PF05557.13	gi|289595818|ref|YP_003482514.1|	-	0.11	10.8	0.0	0.16	10.3	0.0	1.2	1	0	0	1	1	1	0	Mitotic	checkpoint	protein
DUF4795	PF16043.5	gi|289595818|ref|YP_003482514.1|	-	0.12	12.0	2.2	20	4.7	0.1	2.9	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF4795)
PKD_2	PF16407.5	gi|289595818|ref|YP_003482514.1|	-	0.12	12.5	10.6	0.13	12.5	0.2	4.4	3	1	1	4	4	3	0	PKD-like	family
SKA1	PF07160.12	gi|289595818|ref|YP_003482514.1|	-	0.13	12.1	2.4	12	5.7	1.0	3.0	1	1	1	2	2	2	0	Spindle	and	kinetochore-associated	protein	1
FAM76	PF16046.5	gi|289595818|ref|YP_003482514.1|	-	0.13	11.6	1.9	0.61	9.4	0.7	1.9	1	1	1	2	2	2	0	FAM76	protein
HOOK	PF05622.12	gi|289595818|ref|YP_003482514.1|	-	0.14	10.3	0.0	0.2	9.8	0.0	1.1	1	0	0	1	1	1	0	HOOK	protein
Phage_GP20	PF06810.11	gi|289595818|ref|YP_003482514.1|	-	0.15	11.8	9.9	2.8	7.7	0.3	3.0	1	1	1	2	2	2	0	Phage	minor	structural	protein	GP20
Snapin_Pallidin	PF14712.6	gi|289595818|ref|YP_003482514.1|	-	0.17	12.3	1.0	6.8	7.2	0.4	2.8	1	1	2	3	3	3	0	Snapin/Pallidin
YabA	PF06156.13	gi|289595818|ref|YP_003482514.1|	-	0.17	12.5	0.4	32	5.2	0.1	3.3	1	1	2	3	3	3	0	Initiation	control	protein	YabA
DUF2642	PF10842.8	gi|289595818|ref|YP_003482514.1|	-	0.21	11.4	2.6	0.3	10.9	0.4	2.5	2	0	0	2	2	1	0	Protein	of	unknown	function	(DUF2642)
GIT_CC	PF16559.5	gi|289595818|ref|YP_003482514.1|	-	0.26	11.2	0.9	92	3.0	0.1	3.5	2	1	2	4	4	4	0	GIT	coiled-coil	Rho	guanine	nucleotide	exchange	factor
Inhibitor_I42	PF09394.10	gi|289595818|ref|YP_003482514.1|	-	0.3	11.5	10.5	2.3	8.7	0.7	3.9	4	0	0	4	4	2	0	Chagasin	family	peptidase	inhibitor	I42
Syntaxin	PF00804.25	gi|289595818|ref|YP_003482514.1|	-	0.31	10.7	3.4	3.8	7.1	1.2	2.9	1	1	1	3	3	3	0	Syntaxin
LMP	PF04778.12	gi|289595818|ref|YP_003482514.1|	-	0.68	9.8	11.8	0.48	10.3	7.3	2.3	1	1	2	3	3	3	0	LMP	repeated	region
FliD_N	PF02465.18	gi|289595818|ref|YP_003482514.1|	-	1.2	9.9	12.5	66	4.3	0.7	4.6	1	1	1	2	2	2	0	Flagellar	hook-associated	protein	2	N-terminus
MIP-T3_C	PF17749.1	gi|289595818|ref|YP_003482514.1|	-	1.8	8.5	12.1	28	4.6	0.5	4.0	1	1	3	4	4	4	0	Microtubule-binding	protein	MIP-T3	C-terminal	region
HSBP1	PF06825.12	gi|289595818|ref|YP_003482514.1|	-	1.9	8.4	6.8	8.5	6.3	0.6	3.2	1	1	2	3	3	3	0	Heat	shock	factor	binding	protein	1
DUF16	PF01519.16	gi|289595818|ref|YP_003482514.1|	-	1.9	9.0	5.8	4	8.0	1.6	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	DUF16
Sec8_exocyst	PF04048.14	gi|289595818|ref|YP_003482514.1|	-	2.1	8.3	5.2	44	3.9	0.5	3.2	1	1	3	4	4	4	0	Sec8	exocyst	complex	component	specific	domain
Seryl_tRNA_N	PF02403.22	gi|289595818|ref|YP_003482514.1|	-	2.3	8.5	5.9	37	4.6	4.7	2.8	1	1	1	2	2	2	0	Seryl-tRNA	synthetase	N-terminal	domain
Vps53_N	PF04100.12	gi|289595818|ref|YP_003482514.1|	-	2.5	7.0	14.7	4.7	6.1	3.4	2.2	1	1	1	2	2	2	0	Vps53-like,	N-terminal
Vps51	PF08700.11	gi|289595818|ref|YP_003482514.1|	-	2.7	8.1	11.2	1.1e+02	2.9	0.1	5.2	2	2	4	6	6	5	0	Vps51/Vps67
Laminin_I	PF06008.14	gi|289595818|ref|YP_003482514.1|	-	3.3	7.3	8.3	3.3	7.4	4.9	2.0	1	1	1	2	2	2	0	Laminin	Domain	I
BLOC1S3	PF15753.5	gi|289595818|ref|YP_003482514.1|	-	5.4	7.1	9.0	11	6.2	2.4	2.6	1	1	1	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex	1	subunit	3
Bacillus_HBL	PF05791.11	gi|289595818|ref|YP_003482514.1|	-	6.3	6.6	22.3	7.7	6.3	9.3	3.4	1	1	2	3	3	3	0	Bacillus	haemolytic	enterotoxin	(HBL)
HTH_45	PF14947.6	gi|289595820|ref|YP_003482516.1|	-	2.3e-12	46.7	1.5	2.7e-12	46.5	1.5	1.0	1	0	0	1	1	1	1	Winged	helix-turn-helix
DUF4364	PF14277.6	gi|289595820|ref|YP_003482516.1|	-	1.5e-06	28.0	0.1	1.9e-06	27.7	0.1	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
Rrf2	PF02082.20	gi|289595820|ref|YP_003482516.1|	-	0.00038	20.8	0.0	0.00041	20.6	0.0	1.1	1	0	0	1	1	1	1	Transcriptional	regulator
SRP54_N	PF02881.19	gi|289595820|ref|YP_003482516.1|	-	0.0083	16.3	0.2	0.012	15.8	0.2	1.3	1	0	0	1	1	1	1	SRP54-type	protein,	helical	bundle	domain
TrmB	PF01978.19	gi|289595820|ref|YP_003482516.1|	-	0.013	15.3	0.1	0.021	14.7	0.1	1.2	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
DUF505	PF04458.12	gi|289595820|ref|YP_003482516.1|	-	0.018	13.5	0.1	0.018	13.4	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF505)
MarR_2	PF12802.7	gi|289595820|ref|YP_003482516.1|	-	0.019	14.9	0.0	0.024	14.5	0.0	1.2	1	0	0	1	1	1	0	MarR	family
Pox_VLTF3	PF04947.14	gi|289595820|ref|YP_003482516.1|	-	0.02	14.6	0.8	0.022	14.5	0.8	1.2	1	0	0	1	1	1	0	Poxvirus	Late	Transcription	Factor	VLTF3	like
CRS1_YhbY	PF01985.21	gi|289595820|ref|YP_003482516.1|	-	0.024	14.8	0.2	0.033	14.3	0.2	1.4	1	0	0	1	1	1	0	CRS1	/	YhbY	(CRM)	domain
HTH_34	PF13601.6	gi|289595820|ref|YP_003482516.1|	-	0.029	14.6	0.2	0.039	14.1	0.2	1.2	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
Mrr_N	PF14338.6	gi|289595820|ref|YP_003482516.1|	-	0.033	14.3	0.2	0.057	13.6	0.1	1.4	1	1	0	1	1	1	0	Mrr	N-terminal	domain
MarR	PF01047.22	gi|289595820|ref|YP_003482516.1|	-	0.039	13.9	0.0	0.065	13.2	0.0	1.4	1	0	0	1	1	1	0	MarR	family
FtsK_gamma	PF09397.10	gi|289595820|ref|YP_003482516.1|	-	0.043	13.6	0.1	0.061	13.1	0.1	1.3	1	0	0	1	1	1	0	Ftsk	gamma	domain
SMC_ScpB	PF04079.16	gi|289595820|ref|YP_003482516.1|	-	0.063	12.9	0.1	0.069	12.8	0.1	1.1	1	0	0	1	1	1	0	Segregation	and	condensation	complex	subunit	ScpB
Arch_fla_DE	PF04659.13	gi|289595821|ref|YP_003482517.1|	-	4.8e-21	74.4	0.7	1.8e-19	69.4	0.7	2.7	1	1	0	1	1	1	1	Archaeal	flagella	protein
FlaC_arch	PF05377.11	gi|289595821|ref|YP_003482517.1|	-	3.3e-18	65.8	2.9	3.3e-18	65.8	2.9	3.0	4	0	0	4	4	2	1	Flagella	accessory	protein	C	(FlaC)
EzrA	PF06160.12	gi|289595821|ref|YP_003482517.1|	-	0.0063	14.8	3.5	0.0063	14.8	3.5	2.3	2	1	1	3	3	3	2	Septation	ring	formation	regulator,	EzrA
Matrilin_ccoil	PF10393.9	gi|289595821|ref|YP_003482517.1|	-	0.0068	16.2	0.1	0.05	13.5	0.1	2.3	2	0	0	2	2	2	1	Trimeric	coiled-coil	oligomerisation	domain	of	matrilin
TssO	PF17561.2	gi|289595821|ref|YP_003482517.1|	-	0.0092	16.1	4.2	0.48	10.5	1.3	2.7	2	0	0	2	2	2	1	Type	VI	secretion	system,	TssO
NPV_P10	PF05531.12	gi|289595821|ref|YP_003482517.1|	-	0.01	16.2	1.4	0.14	12.7	0.5	3.1	3	1	0	3	3	3	0	Nucleopolyhedrovirus	P10	protein
XhlA	PF10779.9	gi|289595821|ref|YP_003482517.1|	-	0.011	15.9	6.6	0.019	15.1	3.8	2.5	2	0	0	2	2	2	0	Haemolysin	XhlA
Spc29	PF17082.5	gi|289595821|ref|YP_003482517.1|	-	0.013	15.3	2.6	0.015	15.2	1.2	1.7	2	0	0	2	2	2	0	Spindle	Pole	Component	29
Macoilin	PF09726.9	gi|289595821|ref|YP_003482517.1|	-	0.018	13.7	2.8	0.081	11.5	1.1	2.0	2	0	0	2	2	2	0	Macoilin	family
DUF1664	PF07889.12	gi|289595821|ref|YP_003482517.1|	-	0.018	15.1	1.3	0.018	15.1	1.3	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
COG2	PF06148.11	gi|289595821|ref|YP_003482517.1|	-	0.021	14.9	0.9	0.094	12.8	0.3	2.3	2	0	0	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
DUF812	PF05667.11	gi|289595821|ref|YP_003482517.1|	-	0.027	13.4	3.9	0.055	12.4	3.9	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF812)
DivIVA	PF05103.13	gi|289595821|ref|YP_003482517.1|	-	0.044	13.9	2.0	0.13	12.4	0.5	2.3	2	0	0	2	2	2	0	DivIVA	protein
HSBP1	PF06825.12	gi|289595821|ref|YP_003482517.1|	-	0.05	13.5	4.3	0.076	12.9	0.3	2.8	2	1	1	3	3	3	0	Heat	shock	factor	binding	protein	1
ApoLp-III	PF07464.11	gi|289595821|ref|YP_003482517.1|	-	0.079	13.0	1.3	5.1	7.2	0.1	2.9	2	1	0	2	2	2	0	Apolipophorin-III	precursor	(apoLp-III)
KASH_CCD	PF14662.6	gi|289595821|ref|YP_003482517.1|	-	0.082	12.7	2.3	0.17	11.7	1.0	2.1	2	0	0	2	2	2	0	Coiled-coil	region	of	CCDC155	or	KASH
ATG16	PF08614.11	gi|289595821|ref|YP_003482517.1|	-	0.089	13.0	3.6	0.19	11.9	2.5	2.1	2	1	0	2	2	2	0	Autophagy	protein	16	(ATG16)
Med9	PF07544.13	gi|289595821|ref|YP_003482517.1|	-	0.1	12.7	2.1	1.3	9.2	0.5	2.7	2	0	0	2	2	2	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
FAM76	PF16046.5	gi|289595821|ref|YP_003482517.1|	-	0.11	11.8	2.8	0.19	11.0	2.8	1.3	1	0	0	1	1	1	0	FAM76	protein
TraF_2	PF13729.6	gi|289595821|ref|YP_003482517.1|	-	0.11	11.8	1.0	0.18	11.2	1.0	1.3	1	0	0	1	1	1	0	F	plasmid	transfer	operon,	TraF,	protein
CLZ	PF16526.5	gi|289595821|ref|YP_003482517.1|	-	0.12	12.7	2.5	2.2	8.7	0.3	3.2	2	1	1	3	3	3	0	C-terminal	leucine	zipper	domain	of	cyclic	nucleotide-gated	channels
BLOC1_2	PF10046.9	gi|289595821|ref|YP_003482517.1|	-	0.13	12.6	4.5	0.59	10.5	0.2	3.0	2	1	1	3	3	3	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Sec34	PF04136.15	gi|289595821|ref|YP_003482517.1|	-	0.13	12.1	0.7	0.26	11.2	0.2	1.7	2	0	0	2	2	1	0	Sec34-like	family
DUF3450	PF11932.8	gi|289595821|ref|YP_003482517.1|	-	0.15	11.4	2.1	0.13	11.6	0.6	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3450)
TFR_dimer	PF04253.15	gi|289595821|ref|YP_003482517.1|	-	0.16	12.0	0.6	0.55	10.4	0.1	2.0	2	0	0	2	2	2	0	Transferrin	receptor-like	dimerisation	domain
TBCC_N	PF16752.5	gi|289595821|ref|YP_003482517.1|	-	0.18	12.3	2.4	0.67	10.4	0.9	2.6	2	1	0	2	2	2	0	Tubulin-specific	chaperone	C	N-terminal	domain
Syntaxin-6_N	PF09177.11	gi|289595821|ref|YP_003482517.1|	-	0.3	11.7	2.9	0.54	10.9	1.0	2.2	2	0	0	2	2	2	0	Syntaxin	6,	N-terminal
DivIC	PF04977.15	gi|289595821|ref|YP_003482517.1|	-	0.55	10.0	5.8	4.2	7.2	0.5	3.5	2	1	1	3	3	3	0	Septum	formation	initiator
Prefoldin	PF02996.17	gi|289595821|ref|YP_003482517.1|	-	0.69	9.8	5.4	10	6.1	1.0	3.3	2	1	1	3	3	3	0	Prefoldin	subunit
DASH_Dam1	PF08653.10	gi|289595821|ref|YP_003482517.1|	-	0.71	9.7	1.9	48	3.9	0.1	3.0	2	1	1	3	3	3	0	DASH	complex	subunit	Dam1
Spc7	PF08317.11	gi|289595821|ref|YP_003482517.1|	-	1.1	8.1	7.7	0.57	9.0	4.2	2.1	2	0	0	2	2	2	0	Spc7	kinetochore	protein
WD40_alt	PF14077.6	gi|289595821|ref|YP_003482517.1|	-	1.5	8.7	4.5	1.4	8.8	0.3	2.7	3	0	0	3	3	2	0	Alternative	WD40	repeat	motif
Phage_GP20	PF06810.11	gi|289595821|ref|YP_003482517.1|	-	2.4	7.9	10.3	1.4	8.7	1.1	2.8	3	0	0	3	3	2	0	Phage	minor	structural	protein	GP20
SKA1	PF07160.12	gi|289595821|ref|YP_003482517.1|	-	7.2	6.4	10.5	0.17	11.7	1.4	2.6	2	1	0	2	2	2	0	Spindle	and	kinetochore-associated	protein	1
Arch_flagellin	PF01917.16	gi|289595822|ref|YP_003482518.1|	-	2.3e-31	109.2	9.3	2.8e-31	108.9	9.3	1.1	1	0	0	1	1	1	1	Archaebacterial	flagellin
Cadherin_4	PF17803.1	gi|289595822|ref|YP_003482518.1|	-	0.03	14.9	1.3	0.03	14.9	1.3	2.0	2	2	0	2	2	2	0	Bacterial	cadherin-like	domain
Shisa	PF13908.6	gi|289595822|ref|YP_003482518.1|	-	0.13	12.5	0.0	0.2	11.9	0.0	1.3	1	0	0	1	1	1	0	Wnt	and	FGF	inhibitory	regulator
CcmE	PF03100.15	gi|289595822|ref|YP_003482518.1|	-	0.18	11.8	1.8	3.2	7.8	1.4	2.4	1	1	0	1	1	1	0	CcmE
CARDB	PF07705.11	gi|289595823|ref|YP_003482519.1|	-	0.015	15.5	0.2	0.015	15.5	0.2	5.7	3	1	0	5	5	5	0	CARDB
Alph_Pro_TM	PF09608.10	gi|289595823|ref|YP_003482519.1|	-	0.22	11.3	3.2	0.96	9.2	2.2	2.3	1	1	2	3	3	3	0	Putative	transmembrane	protein	(Alph_Pro_TM)
BACON	PF13004.7	gi|289595823|ref|YP_003482519.1|	-	0.77	9.8	4.2	3	7.9	2.2	2.8	2	0	0	2	2	2	0	Putative	binding	domain,	N-terminal
DUF3674	PF12426.8	gi|289595823|ref|YP_003482519.1|	-	1.7	8.7	3.5	34	4.6	0.3	2.6	2	0	0	2	2	2	0	RNA	dependent	RNA	polymerase
HTH_24	PF13412.6	gi|289595824|ref|YP_003482520.1|	-	2.1e-05	24.0	0.0	3.6e-05	23.2	0.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.19	gi|289595824|ref|YP_003482520.1|	-	4.9e-05	23.1	0.3	7.8e-05	22.5	0.3	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_27	PF13463.6	gi|289595824|ref|YP_003482520.1|	-	0.0022	18.4	0.1	0.0036	17.8	0.1	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_20	PF12840.7	gi|289595824|ref|YP_003482520.1|	-	0.017	15.2	0.0	0.023	14.7	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
DUF2250	PF10007.9	gi|289595824|ref|YP_003482520.1|	-	0.034	14.3	0.1	0.047	13.8	0.1	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_IclR	PF09339.10	gi|289595824|ref|YP_003482520.1|	-	0.19	11.6	0.0	0.32	10.8	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_20	PF12840.7	gi|289595825|ref|YP_003482521.1|	-	1.1e-06	28.6	0.0	2.3e-06	27.6	0.0	1.6	2	0	0	2	2	2	1	Helix-turn-helix	domain
TrmB	PF01978.19	gi|289595825|ref|YP_003482521.1|	-	6.5e-05	22.7	0.1	9.1e-05	22.3	0.1	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.10	gi|289595825|ref|YP_003482521.1|	-	0.00014	21.6	0.0	0.0002	21.1	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_11	PF08279.12	gi|289595825|ref|YP_003482521.1|	-	0.00099	19.0	0.1	0.0017	18.3	0.1	1.3	1	0	0	1	1	1	1	HTH	domain
HemN_C	PF06969.16	gi|289595825|ref|YP_003482521.1|	-	0.0013	18.8	0.0	0.0028	17.7	0.0	1.5	1	0	0	1	1	1	1	HemN	C-terminal	domain
HTH_24	PF13412.6	gi|289595825|ref|YP_003482521.1|	-	0.0024	17.4	0.0	0.016	14.8	0.0	2.1	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
DUF2250	PF10007.9	gi|289595825|ref|YP_003482521.1|	-	0.0051	16.9	0.1	0.0085	16.2	0.0	1.5	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Fe_dep_repress	PF01325.19	gi|289595825|ref|YP_003482521.1|	-	0.0065	16.6	0.0	0.011	15.9	0.0	1.3	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Rrf2	PF02082.20	gi|289595825|ref|YP_003482521.1|	-	0.022	15.1	0.0	0.033	14.5	0.0	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
MarR_2	PF12802.7	gi|289595825|ref|YP_003482521.1|	-	0.025	14.5	0.0	0.038	13.9	0.0	1.3	1	0	0	1	1	1	0	MarR	family
MarR	PF01047.22	gi|289595825|ref|YP_003482521.1|	-	0.076	13.0	0.0	0.14	12.1	0.0	1.4	1	0	0	1	1	1	0	MarR	family
DUF3937	PF13073.6	gi|289595825|ref|YP_003482521.1|	-	0.083	13.0	0.0	0.13	12.4	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3937)
HTH_27	PF13463.6	gi|289595825|ref|YP_003482521.1|	-	0.088	13.3	0.0	0.12	12.9	0.0	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_Crp_2	PF13545.6	gi|289595825|ref|YP_003482521.1|	-	0.093	12.7	0.0	0.14	12.1	0.0	1.3	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
Epimerase	PF01370.21	gi|289595826|ref|YP_003482522.1|	-	4.2e-53	180.3	0.1	5.1e-53	180.0	0.1	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
GDP_Man_Dehyd	PF16363.5	gi|289595826|ref|YP_003482522.1|	-	9.6e-50	169.8	0.3	2.3e-49	168.6	0.3	1.5	1	1	0	1	1	1	1	GDP-mannose	4,6	dehydratase
3Beta_HSD	PF01073.19	gi|289595826|ref|YP_003482522.1|	-	3.1e-25	88.7	0.1	4.1e-25	88.4	0.1	1.1	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
Polysacc_synt_2	PF02719.15	gi|289595826|ref|YP_003482522.1|	-	4.1e-21	75.4	0.9	4.6e-20	71.9	0.9	1.9	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
RmlD_sub_bind	PF04321.17	gi|289595826|ref|YP_003482522.1|	-	1.9e-14	53.4	0.0	2.4e-14	53.1	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
NAD_binding_4	PF07993.12	gi|289595826|ref|YP_003482522.1|	-	2.7e-12	46.4	0.3	1.2e-09	37.7	0.3	2.8	1	1	0	1	1	1	1	Male	sterility	protein
NAD_binding_10	PF13460.6	gi|289595826|ref|YP_003482522.1|	-	1.3e-11	44.8	0.0	2.8e-11	43.6	0.0	1.5	2	0	0	2	2	2	1	NAD(P)H-binding
adh_short	PF00106.25	gi|289595826|ref|YP_003482522.1|	-	3.2e-08	33.3	0.1	2.2e-05	24.0	0.0	2.3	2	0	0	2	2	2	2	short	chain	dehydrogenase
NmrA	PF05368.13	gi|289595826|ref|YP_003482522.1|	-	6.8e-05	22.5	0.2	0.00011	21.8	0.1	1.5	2	0	0	2	2	2	1	NmrA-like	family
Sacchrp_dh_NADP	PF03435.18	gi|289595826|ref|YP_003482522.1|	-	0.014	15.7	0.0	0.021	15.1	0.0	1.3	1	0	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
3HCDH_N	PF02737.18	gi|289595826|ref|YP_003482522.1|	-	0.04	13.8	0.1	0.059	13.2	0.1	1.4	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
DapB_N	PF01113.20	gi|289595826|ref|YP_003482522.1|	-	0.071	13.2	0.3	0.21	11.7	0.3	1.9	1	1	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
KR	PF08659.10	gi|289595826|ref|YP_003482522.1|	-	0.14	12.1	0.1	0.28	11.1	0.1	1.6	1	1	0	1	1	1	0	KR	domain
Sm_multidrug_ex	PF06695.11	gi|289595827|ref|YP_003482523.1|	-	4.4e-13	49.9	7.4	4.4e-13	49.9	7.4	2.0	1	1	0	1	1	1	1	Putative	small	multi-drug	export	protein
Stevor	PF17410.2	gi|289595827|ref|YP_003482523.1|	-	0.31	10.5	0.7	0.48	9.9	0.7	1.3	1	0	0	1	1	1	0	Subtelomeric	Variable	Open	Reading	frame
Fibrillarin	PF01269.17	gi|289595828|ref|YP_003482524.1|	-	1.8e-59	200.6	0.4	1.9e-59	200.5	0.4	1.0	1	0	0	1	1	1	1	Fibrillarin
Dsl1_N	PF11988.8	gi|289595828|ref|YP_003482524.1|	-	0.04	12.9	0.1	0.11	11.4	0.0	1.6	2	0	0	2	2	2	0	Retrograde	transport	protein	Dsl1	N	terminal
UPF0020	PF01170.18	gi|289595829|ref|YP_003482525.1|	-	4.7e-40	137.4	0.0	6.7e-40	136.9	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
THUMP	PF02926.17	gi|289595829|ref|YP_003482525.1|	-	1.1e-20	74.2	1.5	2.3e-20	73.2	1.5	1.5	1	0	0	1	1	1	1	THUMP	domain
MTS	PF05175.14	gi|289595829|ref|YP_003482525.1|	-	0.0027	17.3	0.0	0.015	14.9	0.0	2.0	2	0	0	2	2	2	1	Methyltransferase	small	domain
N6_N4_Mtase	PF01555.18	gi|289595829|ref|YP_003482525.1|	-	0.0057	16.4	0.0	0.019	14.7	0.0	1.8	2	0	0	2	2	2	1	DNA	methylase
N6_Mtase	PF02384.16	gi|289595829|ref|YP_003482525.1|	-	0.014	14.7	0.0	0.031	13.5	0.0	1.6	1	1	0	1	1	1	0	N-6	DNA	Methylase
PTS_IIB	PF02302.17	gi|289595830|ref|YP_003482526.1|	-	8.6e-06	26.4	3.9	0.091	13.5	0.0	4.3	3	1	2	5	5	5	2	PTS	system,	Lactose/Cellobiose	specific	IIB	subunit
cobW	PF02492.19	gi|289595830|ref|YP_003482526.1|	-	0.00058	19.5	0.0	0.0013	18.3	0.0	1.6	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
Semialdhyde_dh	PF01118.24	gi|289595830|ref|YP_003482526.1|	-	0.06	13.8	0.0	1.5	9.3	0.0	2.9	3	0	0	3	3	3	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
CbiA	PF01656.23	gi|289595830|ref|YP_003482526.1|	-	0.11	12.6	1.6	0.2	11.7	0.5	1.9	3	0	0	3	3	3	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
SWI2_SNF2	PF18766.1	gi|289595830|ref|YP_003482526.1|	-	0.14	11.8	0.0	0.51	10.0	0.0	1.9	2	1	0	2	2	2	0	SWI2/SNF2	ATPase
B12-binding	PF02310.19	gi|289595830|ref|YP_003482526.1|	-	0.18	11.9	0.5	30	4.7	0.0	3.4	4	0	0	4	4	4	0	B12	binding	domain
Peptidase_C11	PF03415.14	gi|289595831|ref|YP_003482527.1|	-	6.8e-37	127.7	10.8	1.4e-36	126.7	10.8	1.6	1	0	0	1	1	1	1	Clostripain	family
CARDB	PF07705.11	gi|289595831|ref|YP_003482527.1|	-	2.5e-19	69.4	8.1	6.3e-19	68.1	5.8	3.0	2	1	0	3	3	3	1	CARDB
Big_7	PF17957.1	gi|289595831|ref|YP_003482527.1|	-	4.6e-14	52.9	5.1	6.4e-05	23.6	0.0	5.8	5	1	0	5	5	5	2	Bacterial	Ig	domain
fn3	PF00041.21	gi|289595831|ref|YP_003482527.1|	-	2.2e-07	31.1	2.7	3.8e-06	27.2	0.0	3.9	4	0	0	4	4	4	1	Fibronectin	type	III	domain
Big_3_3	PF13750.6	gi|289595831|ref|YP_003482527.1|	-	0.01	15.5	0.5	0.91	9.2	0.0	3.5	3	0	0	3	3	3	0	Bacterial	Ig-like	domain	(group	3)
tRNA-synt_1	PF00133.22	gi|289595832|ref|YP_003482528.1|	-	7.8e-191	635.4	0.8	1.3e-190	634.7	0.8	1.3	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.13	gi|289595832|ref|YP_003482528.1|	-	2.8e-32	111.8	2.3	7.1e-32	110.5	0.7	2.5	2	0	0	2	2	2	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.11	gi|289595832|ref|YP_003482528.1|	-	2.5e-19	69.3	2.4	1.3e-07	30.7	0.0	4.1	3	2	0	3	3	3	3	tRNA	synthetases	class	I	(M)
tRNA-synt_1e	PF01406.19	gi|289595832|ref|YP_003482528.1|	-	1.3e-06	28.0	0.0	0.0024	17.3	0.0	2.6	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1_2	PF13603.6	gi|289595832|ref|YP_003482528.1|	-	5.2e-06	26.1	0.4	2e-05	24.2	0.0	2.0	2	0	0	2	2	2	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1f	PF01921.18	gi|289595832|ref|YP_003482528.1|	-	5.1e-05	22.4	0.0	0.0004	19.4	0.0	2.5	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(K)
zf-ribbon_3	PF13248.6	gi|289595832|ref|YP_003482528.1|	-	0.016	14.6	6.8	2.3	7.7	0.3	3.4	3	0	0	3	3	3	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.6	gi|289595832|ref|YP_003482528.1|	-	0.018	14.7	7.7	0.3	10.9	0.1	3.4	3	0	0	3	3	3	0	zinc-ribbon	domain
zf-NADH-PPase	PF09297.11	gi|289595832|ref|YP_003482528.1|	-	0.031	13.9	5.0	0.74	9.5	0.3	3.2	3	0	0	3	3	3	0	NADH	pyrophosphatase	zinc	ribbon	domain
DZR	PF12773.7	gi|289595832|ref|YP_003482528.1|	-	0.038	14.0	0.3	13	5.9	0.0	3.1	3	0	0	3	3	3	0	Double	zinc	ribbon
zf-TFIIB	PF13453.6	gi|289595832|ref|YP_003482528.1|	-	0.04	13.3	1.3	3.6	7.0	0.1	3.0	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
Rad50_zn_hook	PF04423.14	gi|289595832|ref|YP_003482528.1|	-	0.084	12.7	3.0	2.2	8.2	0.2	4.1	2	0	0	2	2	2	0	Rad50	zinc	hook	motif
Mu-like_Com	PF10122.9	gi|289595832|ref|YP_003482528.1|	-	0.09	12.2	6.6	0.42	10.1	0.2	3.1	3	0	0	3	3	3	0	Mu-like	prophage	protein	Com
HscB_4_cys	PF18256.1	gi|289595832|ref|YP_003482528.1|	-	0.1	12.4	1.8	0.68	9.8	0.1	2.6	2	0	0	2	2	2	0	Co-chaperone	HscB	tetracysteine	metal	binding	motif
DNA_ligase_ZBD	PF03119.16	gi|289595832|ref|YP_003482528.1|	-	0.11	12.5	3.9	4.4	7.4	0.0	2.9	3	0	0	3	3	3	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
DUF2688	PF10892.8	gi|289595832|ref|YP_003482528.1|	-	0.17	11.4	0.1	28	4.3	0.0	2.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2688)
DUF983	PF06170.12	gi|289595832|ref|YP_003482528.1|	-	0.21	12.0	0.2	7.8	7.0	0.0	2.7	3	0	0	3	3	2	0	Protein	of	unknown	function	(DUF983)
Zn-ribbon_8	PF09723.10	gi|289595832|ref|YP_003482528.1|	-	0.28	11.4	4.6	1.8	8.7	0.1	2.9	3	0	0	3	3	2	0	Zinc	ribbon	domain
Nudix_N_2	PF14803.6	gi|289595832|ref|YP_003482528.1|	-	0.8	9.7	6.2	2.6	8.0	0.2	3.3	3	0	0	3	3	3	0	Nudix	N-terminal
YdjO	PF14169.6	gi|289595832|ref|YP_003482528.1|	-	0.9	9.3	2.7	9.2	6.1	0.0	3.2	3	0	0	3	3	3	0	Cold-inducible	protein	YdjO
Auto_anti-p27	PF06677.12	gi|289595832|ref|YP_003482528.1|	-	1.9	8.7	4.4	15	5.9	0.1	3.1	3	0	0	3	3	3	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
Prok-RING_1	PF14446.6	gi|289595832|ref|YP_003482528.1|	-	2.6	8.0	5.6	8.8	6.3	0.1	2.8	3	0	0	3	3	3	0	Prokaryotic	RING	finger	family	1
Zn_ribbon_recom	PF13408.6	gi|289595832|ref|YP_003482528.1|	-	4.5	7.8	5.2	93	3.6	0.0	3.4	3	0	0	3	3	3	0	Recombinase	zinc	beta	ribbon	domain
DUF3185	PF11381.8	gi|289595833|ref|YP_003482529.1|	-	0.37	10.8	4.8	0.52	10.4	1.4	2.5	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3185)
DUF2663	PF10864.8	gi|289595833|ref|YP_003482529.1|	-	0.68	10.4	4.0	0.19	12.1	0.4	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2663)
DeoC	PF01791.9	gi|289595834|ref|YP_003482530.1|	-	1.3e-20	74.0	5.5	1.7e-20	73.6	5.5	1.0	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
NanE	PF04131.14	gi|289595834|ref|YP_003482530.1|	-	0.00011	21.4	1.2	0.00018	20.7	1.2	1.4	1	0	0	1	1	1	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
DAHP_snth_FXD	PF18152.1	gi|289595834|ref|YP_003482530.1|	-	0.0019	18.0	0.0	0.83	9.5	0.0	2.8	2	0	0	2	2	2	2	DAHP	synthase	ferredoxin-like	domain
ComA	PF02679.15	gi|289595834|ref|YP_003482530.1|	-	0.0067	15.9	0.4	1.1	8.6	0.2	2.2	2	0	0	2	2	2	2	(2R)-phospho-3-sulfolactate	synthase	(ComA)
DHDPS	PF00701.22	gi|289595834|ref|YP_003482530.1|	-	0.008	14.9	0.2	0.78	8.4	0.1	2.5	2	1	0	2	2	2	2	Dihydrodipicolinate	synthetase	family
DHO_dh	PF01180.21	gi|289595834|ref|YP_003482530.1|	-	0.028	13.7	3.1	0.039	13.2	2.0	1.6	1	1	0	1	1	1	0	Dihydroorotate	dehydrogenase
AP_endonuc_2	PF01261.24	gi|289595834|ref|YP_003482530.1|	-	0.074	12.5	0.1	3.7	6.9	0.1	2.8	1	1	0	1	1	1	0	Xylose	isomerase-like	TIM	barrel
MutL_C	PF08676.11	gi|289595835|ref|YP_003482531.1|	-	1.4e-38	132.0	0.0	2.9e-38	131.0	0.0	1.5	1	0	0	1	1	1	1	MutL	C	terminal	dimerisation	domain
DNA_mis_repair	PF01119.19	gi|289595835|ref|YP_003482531.1|	-	7.2e-31	106.3	0.1	1.3e-30	105.5	0.1	1.4	1	0	0	1	1	1	1	DNA	mismatch	repair	protein,	C-terminal	domain
HATPase_c_3	PF13589.6	gi|289595835|ref|YP_003482531.1|	-	9.7e-16	57.8	0.6	2.5e-15	56.5	0.3	1.8	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c	PF02518.26	gi|289595835|ref|YP_003482531.1|	-	5.8e-07	30.0	1.2	1.8e-06	28.4	0.2	2.3	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
A_thal_3526	PF09713.10	gi|289595835|ref|YP_003482531.1|	-	0.17	12.1	3.1	2.6	8.4	0.2	3.2	3	0	0	3	3	3	0	Plant	protein	1589	of	unknown	function	(A_thal_3526)
OTCace	PF00185.24	gi|289595836|ref|YP_003482532.1|	-	7.6e-66	221.0	0.1	2.6e-65	219.3	0.1	1.8	2	0	0	2	2	2	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
OTCace_N	PF02729.21	gi|289595836|ref|YP_003482532.1|	-	9.2e-52	175.0	0.0	1.3e-51	174.5	0.0	1.2	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
DUF3169	PF11368.8	gi|289595836|ref|YP_003482532.1|	-	0.21	11.0	0.0	0.36	10.3	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3169)
RHH_1	PF01402.21	gi|289595837|ref|YP_003482533.1|	-	2.6e-08	33.5	0.2	2.6e-08	33.5	0.2	2.2	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
RHH_5	PF07878.11	gi|289595837|ref|YP_003482533.1|	-	2.9e-06	27.1	0.0	8.3e-06	25.6	0.0	1.8	2	0	0	2	2	2	1	CopG-like	RHH_1	or	ribbon-helix-helix	domain,	RHH_5
DUF2811	PF10929.8	gi|289595837|ref|YP_003482533.1|	-	0.001	19.3	0.3	0.01	16.1	0.0	2.4	2	1	1	3	3	3	1	Protein	of	unknown	function	(DUF2811)
Arm_3	PF16186.5	gi|289595837|ref|YP_003482533.1|	-	0.0024	17.4	0.3	0.0051	16.4	0.3	1.5	1	0	0	1	1	1	1	Atypical	Arm	repeat
RelB	PF04221.12	gi|289595837|ref|YP_003482533.1|	-	0.004	17.1	0.0	0.0065	16.4	0.0	1.4	1	0	0	1	1	1	1	RelB	antitoxin
RepB-RCR_reg	PF10723.9	gi|289595837|ref|YP_003482533.1|	-	0.014	15.3	0.2	0.026	14.4	0.2	1.5	1	0	0	1	1	1	0	Replication	regulatory	protein	RepB
ParG	PF09274.10	gi|289595837|ref|YP_003482533.1|	-	0.022	14.9	0.0	0.046	13.9	0.0	1.5	1	0	0	1	1	1	0	ParG
PqqD	PF05402.12	gi|289595837|ref|YP_003482533.1|	-	0.073	13.4	1.2	0.12	12.7	0.5	1.8	2	1	0	2	2	2	0	Coenzyme	PQQ	synthesis	protein	D	(PqqD)
zf-HIT	PF04438.16	gi|289595838|ref|YP_003482534.1|	-	0.081	12.8	4.4	0.21	11.5	4.4	1.8	1	1	0	1	1	1	0	HIT	zinc	finger
Creatininase	PF02633.14	gi|289595839|ref|YP_003482535.1|	-	1.4e-55	188.4	0.0	1.5e-55	188.3	0.0	1.0	1	0	0	1	1	1	1	Creatinine	amidohydrolase
LTD	PF00932.19	gi|289595841|ref|YP_003482537.1|	-	2e-22	79.6	0.6	3.6e-22	78.8	0.6	1.3	1	0	0	1	1	1	1	Lamin	Tail	Domain
FtsX	PF02687.21	gi|289595841|ref|YP_003482537.1|	-	0.0058	17.1	0.1	0.11	13.0	0.1	2.1	2	0	0	2	2	2	1	FtsX-like	permease	family
Baculo_11_kDa	PF06143.11	gi|289595841|ref|YP_003482537.1|	-	0.023	14.3	0.1	2.9	7.5	0.1	2.3	2	0	0	2	2	2	0	Baculovirus	11	kDa	family
O-antigen_lig	PF13425.6	gi|289595841|ref|YP_003482537.1|	-	0.14	11.0	0.1	0.14	11.0	0.1	1.8	3	0	0	3	3	3	0	O-antigen	ligase	like	membrane	protein
ODV-E18	PF10717.9	gi|289595841|ref|YP_003482537.1|	-	0.15	12.0	0.7	2.9	7.8	0.3	2.6	2	0	0	2	2	2	0	Occlusion-derived	virus	envelope	protein	ODV-E18
DUF89	PF01937.19	gi|289595842|ref|YP_003482538.1|	-	6.2e-54	183.3	0.9	7.5e-54	183.0	0.9	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF89
UAF_Rrn10	PF05234.11	gi|289595842|ref|YP_003482538.1|	-	0.047	13.9	0.2	0.53	10.6	0.1	2.4	2	1	0	2	2	2	0	UAF	complex	subunit	Rrn10
Transglut_core	PF01841.19	gi|289595843|ref|YP_003482539.1|	-	2e-22	79.8	0.3	4.1e-22	78.8	0.3	1.5	1	0	0	1	1	1	1	Transglutaminase-like	superfamily
Transglut_core3	PF13471.6	gi|289595843|ref|YP_003482539.1|	-	0.17	11.8	0.0	0.33	10.9	0.0	1.4	1	0	0	1	1	1	0	Transglutaminase-like	superfamily
Iso_dh	PF00180.20	gi|289595844|ref|YP_003482540.1|	-	1.2e-95	320.7	0.0	1.4e-95	320.5	0.0	1.0	1	0	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
PIN_5	PF08745.11	gi|289595844|ref|YP_003482540.1|	-	0.11	11.9	0.2	0.22	10.9	0.0	1.6	2	0	0	2	2	2	0	PINc	domain	ribonuclease
bPH_6	PF10756.9	gi|289595845|ref|YP_003482541.1|	-	0.059	13.5	0.0	0.077	13.1	0.0	1.3	1	0	0	1	1	1	0	Bacterial	PH	domain
DUF4131	PF13567.6	gi|289595845|ref|YP_003482541.1|	-	0.83	9.3	7.2	1.4	8.6	7.2	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
Radical_SAM	PF04055.21	gi|289595846|ref|YP_003482542.1|	-	6.8e-25	88.4	9.7	1e-23	84.6	9.7	2.4	1	1	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|289595846|ref|YP_003482542.1|	-	8.2e-15	55.3	3.7	9.3e-14	51.9	3.7	2.3	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4	PF00037.27	gi|289595846|ref|YP_003482542.1|	-	2.8e-11	42.7	10.1	2.2e-06	27.2	1.7	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|289595846|ref|YP_003482542.1|	-	1.5e-08	34.3	11.1	0.00053	20.0	1.8	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|289595846|ref|YP_003482542.1|	-	3.9e-08	32.9	15.8	9.4e-05	22.3	2.7	3.0	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|289595846|ref|YP_003482542.1|	-	4.5e-08	33.6	10.9	4.5e-08	33.6	10.9	2.1	2	1	0	2	2	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|289595846|ref|YP_003482542.1|	-	1.3e-07	31.7	9.3	1.3e-07	31.7	9.3	1.8	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|289595846|ref|YP_003482542.1|	-	1.1e-06	28.7	21.8	4.5e-05	23.5	12.3	2.6	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|289595846|ref|YP_003482542.1|	-	3.9e-06	26.9	9.9	3.9e-06	26.9	9.9	1.9	1	1	1	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|289595846|ref|YP_003482542.1|	-	1.1e-05	26.3	9.7	0.0012	19.8	0.4	2.7	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_14	PF13394.6	gi|289595846|ref|YP_003482542.1|	-	0.00013	22.1	9.9	0.00053	20.1	1.1	2.8	2	1	1	3	3	3	2	4Fe-4S	single	cluster	domain
PHD_like	PF12910.7	gi|289595846|ref|YP_003482542.1|	-	0.0091	16.0	0.2	0.023	14.7	0.0	1.8	2	0	0	2	2	2	1	Antitoxin	of	toxin-antitoxin,	RelE	/	RelB,	TA	system
Fer4_13	PF13370.6	gi|289595846|ref|YP_003482542.1|	-	0.026	15.1	15.7	0.21	12.2	0.8	3.4	4	0	0	4	4	4	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_4	PF12800.7	gi|289595846|ref|YP_003482542.1|	-	0.043	14.3	3.7	0.043	14.3	3.7	2.9	3	0	0	3	3	2	0	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|289595846|ref|YP_003482542.1|	-	0.045	14.2	2.0	0.045	14.2	2.0	2.8	2	1	1	3	3	2	0	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|289595846|ref|YP_003482542.1|	-	0.067	13.7	17.6	0.37	11.4	2.9	2.7	1	1	3	4	4	4	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|289595846|ref|YP_003482542.1|	-	0.08	13.7	0.4	0.08	13.7	0.4	2.9	3	0	0	3	3	3	0	4Fe-4S	single	cluster	domain
Fer4_3	PF12798.7	gi|289595846|ref|YP_003482542.1|	-	0.093	13.7	5.3	0.093	13.7	5.3	2.6	3	0	0	3	3	2	0	4Fe-4S	binding	domain
PFL-like	PF02901.15	gi|289595847|ref|YP_003482543.1|	-	6.8e-214	712.2	0.0	8.7e-214	711.9	0.0	1.0	1	0	0	1	1	1	1	Pyruvate	formate	lyase-like
Gly_radical	PF01228.21	gi|289595847|ref|YP_003482543.1|	-	6.6e-29	100.6	0.0	2e-28	99.0	0.0	1.9	1	0	0	1	1	1	1	Glycine	radical
T3SSipB	PF16535.5	gi|289595847|ref|YP_003482543.1|	-	0.23	11.9	1.0	0.43	11.1	1.0	1.3	1	0	0	1	1	1	0	Type	III	cell	invasion	protein	SipB
DUF4125	PF13526.6	gi|289595848|ref|YP_003482544.1|	-	1.5e-41	142.2	9.9	4.7e-41	140.6	9.9	1.7	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF4125)
DUF1904	PF08921.11	gi|289595848|ref|YP_003482544.1|	-	0.054	13.8	0.7	0.096	13.0	0.4	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1904)
Peptidase_M20	PF01546.28	gi|289595849|ref|YP_003482545.1|	-	4.4e-23	82.1	0.0	7e-23	81.4	0.0	1.3	1	1	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.14	gi|289595849|ref|YP_003482545.1|	-	1.5e-14	53.9	0.0	2.7e-14	53.0	0.0	1.5	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Peptidase_M42	PF05343.14	gi|289595849|ref|YP_003482545.1|	-	2.8e-10	39.7	0.0	6.4e-05	22.1	0.0	3.1	3	0	0	3	3	3	3	M42	glutamyl	aminopeptidase
Peptidase_M28	PF04389.17	gi|289595849|ref|YP_003482545.1|	-	4.8e-09	36.2	0.0	5e-08	32.9	0.0	2.1	1	1	0	1	1	1	1	Peptidase	family	M28
SBF	PF01758.16	gi|289595850|ref|YP_003482546.1|	-	9.8e-25	87.4	16.6	9.8e-25	87.4	16.6	2.3	1	1	1	2	2	2	1	Sodium	Bile	acid	symporter	family
ABC2_membrane	PF01061.24	gi|289595851|ref|YP_003482547.1|	-	1.9e-10	40.5	25.7	3e-10	39.9	25.7	1.2	1	0	0	1	1	1	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.7	gi|289595851|ref|YP_003482547.1|	-	1.6e-06	27.5	24.5	1.6e-06	27.5	24.5	1.4	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC_tran	PF00005.27	gi|289595852|ref|YP_003482548.1|	-	1.1e-24	87.5	0.0	2.3e-24	86.4	0.0	1.5	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.6	gi|289595852|ref|YP_003482548.1|	-	1.1e-12	48.4	0.0	1.4e-07	31.7	0.0	2.1	2	0	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|289595852|ref|YP_003482548.1|	-	4.9e-09	35.9	0.0	2.1e-07	30.6	0.0	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.6	gi|289595852|ref|YP_003482548.1|	-	1.7e-05	24.7	0.0	0.017	14.9	0.0	2.3	1	1	0	2	2	2	2	AAA	ATPase	domain
AAA_29	PF13555.6	gi|289595852|ref|YP_003482548.1|	-	0.00015	21.5	0.2	0.00039	20.1	0.2	1.7	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.6	gi|289595852|ref|YP_003482548.1|	-	0.00049	20.7	0.2	0.00099	19.7	0.2	1.4	1	0	0	1	1	1	1	AAA	domain
SRP54	PF00448.22	gi|289595852|ref|YP_003482548.1|	-	0.0034	17.0	0.8	0.0065	16.1	0.8	1.4	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
AAA_5	PF07728.14	gi|289595852|ref|YP_003482548.1|	-	0.0035	17.3	0.1	3.7	7.6	0.0	2.4	2	0	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
AAA_27	PF13514.6	gi|289595852|ref|YP_003482548.1|	-	0.0036	16.9	0.0	0.0063	16.1	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_30	PF13604.6	gi|289595852|ref|YP_003482548.1|	-	0.0037	17.0	0.3	0.012	15.3	0.1	1.8	2	0	0	2	2	2	1	AAA	domain
AAA_13	PF13166.6	gi|289595852|ref|YP_003482548.1|	-	0.0052	15.5	0.0	2.3	6.8	0.0	2.1	2	0	0	2	2	2	2	AAA	domain
AAA_22	PF13401.6	gi|289595852|ref|YP_003482548.1|	-	0.02	15.2	0.1	0.051	13.8	0.1	1.6	1	0	0	1	1	1	0	AAA	domain
Mg_chelatase	PF01078.21	gi|289595852|ref|YP_003482548.1|	-	0.03	13.7	0.0	0.25	10.7	0.0	2.0	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
RsgA_GTPase	PF03193.16	gi|289595852|ref|YP_003482548.1|	-	0.05	13.5	0.1	0.11	12.3	0.1	1.6	1	0	0	1	1	1	0	RsgA	GTPase
AAA_16	PF13191.6	gi|289595852|ref|YP_003482548.1|	-	0.064	13.6	0.0	0.13	12.6	0.0	1.5	1	0	0	1	1	1	0	AAA	ATPase	domain
ResIII	PF04851.15	gi|289595852|ref|YP_003482548.1|	-	0.085	12.9	0.3	6.8	6.7	0.0	2.2	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
AAA_19	PF13245.6	gi|289595852|ref|YP_003482548.1|	-	0.098	13.0	0.1	0.3	11.4	0.1	1.8	1	0	0	1	1	1	0	AAA	domain
MukB	PF04310.12	gi|289595852|ref|YP_003482548.1|	-	0.12	12.2	0.1	0.24	11.2	0.1	1.4	1	0	0	1	1	1	0	MukB	N-terminal
ThrE	PF06738.12	gi|289595853|ref|YP_003482549.1|	-	0.11	11.8	4.8	0.12	11.7	4.8	1.0	1	0	0	1	1	1	0	Putative	threonine/serine	exporter
DUF2207	PF09972.9	gi|289595853|ref|YP_003482549.1|	-	9.1	4.9	7.2	11	4.7	7.2	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
SHOCT	PF09851.9	gi|289595854|ref|YP_003482550.1|	-	1.4e-05	24.7	3.9	0.00014	21.4	3.9	2.4	2	0	0	2	2	2	1	Short	C-terminal	domain
Bactofilin	PF04519.13	gi|289595854|ref|YP_003482550.1|	-	0.00012	22.3	10.2	0.00046	20.4	0.7	3.1	1	1	1	2	2	2	2	Polymer-forming	cytoskeletal
DUF3672	PF12421.8	gi|289595854|ref|YP_003482550.1|	-	0.037	13.9	6.2	0.24	11.3	2.7	3.4	1	1	3	4	4	4	0	Fibronectin	type	III	protein
ARD	PF03079.14	gi|289595854|ref|YP_003482550.1|	-	2.5	8.3	6.7	3.7	7.7	6.7	1.4	1	0	0	1	1	1	0	ARD/ARD'	family
HTH_5	PF01022.20	gi|289595855|ref|YP_003482551.1|	-	4.4e-07	29.7	0.1	7.3e-07	29.0	0.1	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.7	gi|289595855|ref|YP_003482551.1|	-	5.2e-07	29.6	0.1	1.4e-06	28.3	0.1	1.6	2	0	0	2	2	2	1	Helix-turn-helix	domain
DUF2250	PF10007.9	gi|289595855|ref|YP_003482551.1|	-	0.0022	18.0	0.1	0.078	13.1	0.1	2.2	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_11	PF08279.12	gi|289595855|ref|YP_003482551.1|	-	0.0031	17.4	0.0	0.0048	16.8	0.0	1.4	1	0	0	1	1	1	1	HTH	domain
HxlR	PF01638.17	gi|289595855|ref|YP_003482551.1|	-	0.0034	17.2	0.0	0.0055	16.5	0.0	1.3	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_34	PF13601.6	gi|289595855|ref|YP_003482551.1|	-	0.0049	17.0	0.0	0.0087	16.2	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
DUF2513	PF10711.9	gi|289595855|ref|YP_003482551.1|	-	0.0067	16.7	0.0	0.013	15.8	0.0	1.4	1	1	0	1	1	1	1	Hypothetical	protein	(DUF2513)
HTH_45	PF14947.6	gi|289595855|ref|YP_003482551.1|	-	0.007	16.3	0.0	0.012	15.6	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix
TrmB	PF01978.19	gi|289595855|ref|YP_003482551.1|	-	0.012	15.5	0.0	0.017	15.0	0.0	1.3	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.7	gi|289595855|ref|YP_003482551.1|	-	0.02	14.8	1.0	0.02	14.8	0.0	1.4	2	0	0	2	2	1	0	MarR	family
SHOCT	PF09851.9	gi|289595855|ref|YP_003482551.1|	-	0.025	14.3	0.2	0.025	14.3	0.2	1.9	2	0	0	2	2	2	0	Short	C-terminal	domain
GvpG	PF05120.12	gi|289595855|ref|YP_003482551.1|	-	0.029	14.4	0.1	0.057	13.4	0.1	1.6	1	0	0	1	1	1	0	Gas	vesicle	protein	G
DUF4423	PF14394.6	gi|289595855|ref|YP_003482551.1|	-	0.034	13.9	0.0	0.044	13.5	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
HTH_28	PF13518.6	gi|289595855|ref|YP_003482551.1|	-	0.046	13.9	0.1	0.097	12.8	0.1	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
DUF1495	PF07381.11	gi|289595855|ref|YP_003482551.1|	-	0.13	12.1	0.0	0.99	9.3	0.0	2.2	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain	(DUF1495)
DUF4364	PF14277.6	gi|289595855|ref|YP_003482551.1|	-	0.16	11.7	0.0	0.2	11.4	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4364)
Acetyltransf_1	PF00583.25	gi|289595856|ref|YP_003482552.1|	-	7.7e-22	77.7	0.2	9.3e-22	77.5	0.2	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.7	gi|289595856|ref|YP_003482552.1|	-	3.7e-16	59.3	0.1	6e-16	58.6	0.1	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.7	gi|289595856|ref|YP_003482552.1|	-	2.3e-15	56.6	0.1	3.2e-15	56.2	0.1	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.10	gi|289595856|ref|YP_003482552.1|	-	2.4e-10	40.2	0.0	3.8e-10	39.6	0.0	1.2	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_9	PF13527.7	gi|289595856|ref|YP_003482552.1|	-	8.4e-09	35.6	0.0	1.2e-08	35.1	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.7	gi|289595856|ref|YP_003482552.1|	-	9.7e-07	29.0	0.3	1.3e-06	28.7	0.3	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_18	PF18014.1	gi|289595856|ref|YP_003482552.1|	-	0.00023	21.0	0.0	0.0069	16.2	0.0	2.1	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_15	PF17013.5	gi|289595856|ref|YP_003482552.1|	-	0.0024	17.3	0.1	0.0054	16.2	0.1	1.6	1	1	0	1	1	1	1	Putative	acetyl-transferase
Acetyltransf_CG	PF14542.6	gi|289595856|ref|YP_003482552.1|	-	0.006	16.7	0.0	0.01	15.9	0.0	1.5	1	1	0	1	1	1	1	GCN5-related	N-acetyl-transferase
Acetyltransf_3	PF13302.7	gi|289595856|ref|YP_003482552.1|	-	0.0062	17.2	0.1	0.0075	17.0	0.1	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_13	PF13880.6	gi|289595856|ref|YP_003482552.1|	-	0.0073	16.3	0.0	0.012	15.6	0.0	1.4	1	0	0	1	1	1	1	ESCO1/2	acetyl-transferase
PanZ	PF12568.8	gi|289595856|ref|YP_003482552.1|	-	0.0091	15.7	0.0	0.014	15.1	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain,	PanZ
MOZ_SAS	PF01853.18	gi|289595856|ref|YP_003482552.1|	-	0.024	14.3	0.0	0.03	14.0	0.0	1.2	1	0	0	1	1	1	0	MOZ/SAS	family
DUF1922	PF09082.10	gi|289595857|ref|YP_003482553.1|	-	1.9e-05	24.9	1.2	2e-05	24.8	1.2	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1922)
DNA_RNApol_7kD	PF03604.13	gi|289595857|ref|YP_003482553.1|	-	0.00018	21.1	3.8	0.00051	19.7	3.8	1.7	1	1	0	1	1	1	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf_C2H2_13	PF18508.1	gi|289595857|ref|YP_003482553.1|	-	0.041	13.5	0.4	0.049	13.2	0.4	1.2	1	0	0	1	1	1	0	Zinc	finger	domain
Zn_ribbon_recom	PF13408.6	gi|289595857|ref|YP_003482553.1|	-	0.073	13.6	4.1	6.8	7.3	4.1	2.0	1	1	0	1	1	1	0	Recombinase	zinc	beta	ribbon	domain
Ribosomal_L37ae	PF01780.19	gi|289595858|ref|YP_003482554.1|	-	3.2e-28	97.6	4.6	3.7e-28	97.4	4.6	1.1	1	0	0	1	1	1	1	Ribosomal	L37ae	protein	family
Zn_Tnp_IS1595	PF12760.7	gi|289595858|ref|YP_003482554.1|	-	0.00034	20.5	3.2	0.00049	20.0	3.2	1.3	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
Zn-ribbon_8	PF09723.10	gi|289595858|ref|YP_003482554.1|	-	0.0019	18.3	0.8	0.036	14.2	0.1	2.1	2	0	0	2	2	2	1	Zinc	ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|289595858|ref|YP_003482554.1|	-	0.0021	17.6	0.5	0.0042	16.6	0.5	1.7	1	1	0	1	1	1	1	TFIIB	zinc-binding
OrfB_Zn_ribbon	PF07282.11	gi|289595858|ref|YP_003482554.1|	-	0.0059	16.5	2.2	0.0099	15.8	2.2	1.3	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
RPA_interact_C	PF14768.6	gi|289595858|ref|YP_003482554.1|	-	0.022	15.3	0.1	0.029	14.9	0.1	1.2	1	0	0	1	1	1	0	Replication	protein	A	interacting	C-terminal
Zn_ribbon_SprT	PF17283.2	gi|289595858|ref|YP_003482554.1|	-	0.048	13.6	5.7	0.63	10.0	0.3	2.3	1	1	0	2	2	2	0	SprT-like	zinc	ribbon	domain
Rubredoxin_2	PF18073.1	gi|289595858|ref|YP_003482554.1|	-	0.12	12.2	2.7	5.4	6.8	0.1	2.3	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
RecR	PF02132.15	gi|289595858|ref|YP_003482554.1|	-	0.12	12.0	1.9	0.25	10.9	1.9	1.5	1	1	0	1	1	1	0	RecR	protein
PhnA_Zn_Ribbon	PF08274.12	gi|289595858|ref|YP_003482554.1|	-	0.16	11.9	2.0	7	6.7	0.0	2.2	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
Prim_Zn_Ribbon	PF08273.12	gi|289595858|ref|YP_003482554.1|	-	3.2	8.1	7.0	22	5.4	7.0	2.4	1	1	0	1	1	1	0	Zinc-binding	domain	of	primase-helicase
RNase_PH	PF01138.21	gi|289595859|ref|YP_003482555.1|	-	1.1e-26	93.9	0.0	1.6e-26	93.4	0.0	1.2	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.15	gi|289595859|ref|YP_003482555.1|	-	8.6e-13	48.1	0.0	1.5e-12	47.3	0.0	1.5	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	2
RNase_PH	PF01138.21	gi|289595860|ref|YP_003482556.1|	-	4.2e-33	114.6	0.0	5.9e-33	114.2	0.0	1.2	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.15	gi|289595860|ref|YP_003482556.1|	-	1.9e-14	53.5	0.9	3.4e-14	52.6	0.9	1.5	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	2
KH_1	PF00013.29	gi|289595861|ref|YP_003482557.1|	-	4.3e-09	36.1	1.6	1e-08	34.9	1.6	1.6	1	0	0	1	1	1	1	KH	domain
KH_6	PF15985.5	gi|289595861|ref|YP_003482557.1|	-	2e-08	34.4	0.8	4.1e-08	33.5	0.1	1.9	2	0	0	2	2	2	1	KH	domain
ECR1_N	PF14382.6	gi|289595861|ref|YP_003482557.1|	-	7.7e-07	28.8	0.0	1.5e-06	27.9	0.0	1.5	1	0	0	1	1	1	1	Exosome	complex	exonuclease	RRP4	N-terminal	region
S1	PF00575.23	gi|289595861|ref|YP_003482557.1|	-	9.7e-05	22.6	0.0	0.00025	21.3	0.0	1.7	1	0	0	1	1	1	1	S1	RNA	binding	domain
KH_2	PF07650.17	gi|289595861|ref|YP_003482557.1|	-	0.00049	19.9	0.5	0.0014	18.4	0.3	1.9	1	1	1	2	2	2	1	KH	domain
SBDS	PF01172.18	gi|289595862|ref|YP_003482558.1|	-	1.8e-21	76.0	0.8	3.7e-21	75.0	0.8	1.6	1	0	0	1	1	1	1	Shwachman-Bodian-Diamond	syndrome	(SBDS)	protein
SBDS_C	PF09377.10	gi|289595862|ref|YP_003482558.1|	-	2.5e-20	72.6	0.0	4.7e-20	71.7	0.0	1.4	1	0	0	1	1	1	1	SBDS	protein	C-terminal	domain
Proteasome	PF00227.26	gi|289595863|ref|YP_003482559.1|	-	2.3e-61	206.6	0.1	2.9e-61	206.3	0.1	1.1	1	0	0	1	1	1	1	Proteasome	subunit
Proteasome_A_N	PF10584.9	gi|289595863|ref|YP_003482559.1|	-	1.8e-13	49.9	0.1	1.8e-13	49.9	0.1	1.7	2	0	0	2	2	2	1	Proteasome	subunit	A	N-terminal	signature
DUF3562	PF12085.8	gi|289595863|ref|YP_003482559.1|	-	0.071	12.7	1.5	6.8	6.4	0.1	3.2	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3562)
tRNA-synt_2d	PF01409.20	gi|289595864|ref|YP_003482560.1|	-	9.2e-95	316.8	0.0	1.3e-94	316.3	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	II	core	domain	(F)
tRNA_synthFbeta	PF17759.1	gi|289595864|ref|YP_003482560.1|	-	1.3e-12	47.7	0.0	5e-11	42.4	0.0	2.2	2	0	0	2	2	2	1	Phenylalanyl	tRNA	synthetase	beta	chain	CLM	domain
tRNA-synt_2	PF00152.20	gi|289595864|ref|YP_003482560.1|	-	4.7e-07	29.2	3.8	0.00028	20.1	0.1	3.6	2	1	1	4	4	4	2	tRNA	synthetases	class	II	(D,	K	and	N)
PheRS_DBD3	PF18553.1	gi|289595864|ref|YP_003482560.1|	-	0.00088	19.5	0.1	0.0065	16.7	0.0	2.3	2	0	0	2	2	2	1	PheRS	DNA	binding	domain	3
tRNA-synt_2b	PF00587.25	gi|289595864|ref|YP_003482560.1|	-	0.051	13.5	0.1	0.62	10.0	0.0	2.5	1	1	1	2	2	2	0	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
PGM_PMM_I	PF02878.16	gi|289595865|ref|YP_003482561.1|	-	5.4e-27	94.2	0.0	1.2e-26	93.1	0.0	1.6	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_III	PF02880.16	gi|289595865|ref|YP_003482561.1|	-	1.2e-16	60.9	0.0	2.1e-16	60.1	0.0	1.4	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_II	PF02879.16	gi|289595865|ref|YP_003482561.1|	-	1.4e-14	54.6	0.0	3e-14	53.5	0.0	1.6	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_IV	PF00408.20	gi|289595865|ref|YP_003482561.1|	-	2.3e-08	34.1	0.1	6.2e-08	32.7	0.1	1.7	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
Rep_fac_C	PF08542.11	gi|289595866|ref|YP_003482562.1|	-	1.4e-24	86.3	0.1	3.4e-24	85.0	0.1	1.7	1	0	0	1	1	1	1	Replication	factor	C	C-terminal	domain
AAA	PF00004.29	gi|289595866|ref|YP_003482562.1|	-	2.7e-17	63.4	0.0	4.9e-17	62.6	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DNA_pol3_delta2	PF13177.6	gi|289595866|ref|YP_003482562.1|	-	1.1e-13	51.3	0.0	3.1e-10	40.1	0.0	2.4	1	1	0	1	1	1	1	DNA	polymerase	III,	delta	subunit
RuvB_N	PF05496.12	gi|289595866|ref|YP_003482562.1|	-	8.3e-10	38.6	0.4	4e-08	33.1	0.0	2.9	2	1	0	2	2	2	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
DNA_pol3_delta	PF06144.13	gi|289595866|ref|YP_003482562.1|	-	1.9e-07	31.0	0.0	8.3e-07	28.9	0.0	1.8	2	0	0	2	2	2	1	DNA	polymerase	III,	delta	subunit
AAA_16	PF13191.6	gi|289595866|ref|YP_003482562.1|	-	3.9e-07	30.6	0.1	4e-05	24.1	0.0	2.4	2	1	1	3	3	2	1	AAA	ATPase	domain
AAA_assoc_2	PF16193.5	gi|289595866|ref|YP_003482562.1|	-	2.3e-06	27.8	0.1	4.8e-06	26.8	0.1	1.6	1	0	0	1	1	1	1	AAA	C-terminal	domain
Rad17	PF03215.15	gi|289595866|ref|YP_003482562.1|	-	5.8e-06	26.4	0.0	1.5e-05	25.0	0.0	1.7	2	0	0	2	2	1	1	Rad17	P-loop	domain
AAA_14	PF13173.6	gi|289595866|ref|YP_003482562.1|	-	1.7e-05	24.9	0.0	5.4e-05	23.2	0.0	1.9	1	1	1	2	2	2	1	AAA	domain
ResIII	PF04851.15	gi|289595866|ref|YP_003482562.1|	-	6.8e-05	22.9	0.0	0.00016	21.8	0.0	1.8	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
TIP49	PF06068.13	gi|289595866|ref|YP_003482562.1|	-	0.00026	20.3	0.0	0.00058	19.2	0.0	1.6	1	1	1	2	2	2	1	TIP49	P-loop	domain
Sigma54_activ_2	PF14532.6	gi|289595866|ref|YP_003482562.1|	-	0.00029	21.0	0.0	0.0011	19.1	0.0	1.9	2	1	0	2	2	1	1	Sigma-54	interaction	domain
AAA_22	PF13401.6	gi|289595866|ref|YP_003482562.1|	-	0.00041	20.6	0.1	0.27	11.5	0.1	2.4	1	1	1	2	2	2	1	AAA	domain
Mg_chelatase	PF01078.21	gi|289595866|ref|YP_003482562.1|	-	0.00046	19.6	0.0	0.028	13.8	0.0	2.4	2	1	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
IstB_IS21	PF01695.17	gi|289595866|ref|YP_003482562.1|	-	0.00051	19.8	0.0	0.00094	19.0	0.0	1.5	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_3	PF07726.11	gi|289595866|ref|YP_003482562.1|	-	0.00053	19.8	0.0	0.00091	19.1	0.0	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_2	PF07724.14	gi|289595866|ref|YP_003482562.1|	-	0.0014	18.8	0.0	0.011	15.9	0.0	2.2	2	0	0	2	2	2	1	AAA	domain	(Cdc48	subfamily)
PhoH	PF02562.16	gi|289595866|ref|YP_003482562.1|	-	0.0042	16.6	0.0	0.02	14.3	0.0	2.0	2	0	0	2	2	2	1	PhoH-like	protein
AAA_5	PF07728.14	gi|289595866|ref|YP_003482562.1|	-	0.0048	16.9	0.0	0.034	14.1	0.0	2.3	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_7	PF12775.7	gi|289595866|ref|YP_003482562.1|	-	0.0049	16.4	0.0	0.012	15.2	0.0	1.6	2	0	0	2	2	2	1	P-loop	containing	dynein	motor	region
Sigma54_activat	PF00158.26	gi|289595866|ref|YP_003482562.1|	-	0.0049	16.6	0.0	0.69	9.6	0.0	2.3	2	0	0	2	2	2	1	Sigma-54	interaction	domain
AAA_24	PF13479.6	gi|289595866|ref|YP_003482562.1|	-	0.0067	16.2	0.0	0.015	15.0	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.6	gi|289595866|ref|YP_003482562.1|	-	0.0088	16.6	0.0	0.02	15.4	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
AAA_25	PF13481.6	gi|289595866|ref|YP_003482562.1|	-	0.03	13.9	0.0	0.064	12.8	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
FtsK_SpoIIIE	PF01580.18	gi|289595866|ref|YP_003482562.1|	-	0.038	13.3	0.0	0.12	11.7	0.0	1.8	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
AAA_33	PF13671.6	gi|289595866|ref|YP_003482562.1|	-	0.053	13.7	0.0	0.13	12.4	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
APS_kinase	PF01583.20	gi|289595866|ref|YP_003482562.1|	-	0.071	13.0	0.0	0.79	9.6	0.0	2.3	2	0	0	2	2	2	0	Adenylylsulphate	kinase
T2SSE	PF00437.20	gi|289595866|ref|YP_003482562.1|	-	0.072	12.1	0.0	0.13	11.3	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
TniB	PF05621.11	gi|289595866|ref|YP_003482562.1|	-	0.1	12.0	0.0	0.35	10.2	0.0	1.8	2	0	0	2	2	2	0	Bacterial	TniB	protein
RanGAP1_C	PF07834.11	gi|289595866|ref|YP_003482562.1|	-	0.1	12.2	0.1	0.18	11.4	0.1	1.4	1	0	0	1	1	1	0	RanGAP1	C-terminal	domain
Viral_helicase1	PF01443.18	gi|289595866|ref|YP_003482562.1|	-	0.12	12.1	0.0	0.18	11.5	0.0	1.3	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
AAA_28	PF13521.6	gi|289595866|ref|YP_003482562.1|	-	0.13	12.5	0.1	0.24	11.6	0.1	1.6	1	1	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.22	gi|289595866|ref|YP_003482562.1|	-	0.13	12.7	0.0	0.25	11.7	0.0	1.5	1	0	0	1	1	1	0	RNA	helicase
AAA_23	PF13476.6	gi|289595866|ref|YP_003482562.1|	-	0.13	12.7	0.0	0.24	11.9	0.0	1.4	1	1	0	1	1	1	0	AAA	domain
AAA_30	PF13604.6	gi|289595866|ref|YP_003482562.1|	-	0.19	11.4	0.8	0.38	10.4	0.3	1.9	2	1	0	2	2	2	0	AAA	domain
CPBP	PF02517.16	gi|289595867|ref|YP_003482563.1|	-	2.4e-15	56.7	6.7	2.4e-15	56.7	6.7	2.2	2	1	0	2	2	2	1	CPBP	intramembrane	metalloprotease
DUF3792	PF12670.7	gi|289595867|ref|YP_003482563.1|	-	0.07	13.3	22.1	2.1	8.6	7.2	3.2	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3792)
DUF4118	PF13493.6	gi|289595867|ref|YP_003482563.1|	-	0.12	12.2	16.5	0.34	10.7	4.4	2.6	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4118)
DUF3278	PF11683.8	gi|289595868|ref|YP_003482564.1|	-	0.12	12.5	0.6	0.27	11.3	0.2	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3278)
PKD	PF00801.20	gi|289595868|ref|YP_003482564.1|	-	0.31	10.9	2.6	0.31	10.9	0.2	2.2	3	0	0	3	3	3	0	PKD	domain
GtrA	PF04138.14	gi|289595870|ref|YP_003482566.1|	-	4.7e-17	62.3	18.7	7.8e-17	61.6	18.7	1.3	1	0	0	1	1	1	1	GtrA-like	protein
ApbA	PF02558.16	gi|289595871|ref|YP_003482567.1|	-	4.2e-29	101.1	0.4	1.4e-28	99.4	0.1	1.9	2	0	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
ApbA_C	PF08546.11	gi|289595871|ref|YP_003482567.1|	-	2.8e-23	82.5	0.1	4.6e-23	81.8	0.1	1.3	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA	C	terminal
F420_oxidored	PF03807.17	gi|289595871|ref|YP_003482567.1|	-	5e-05	23.8	0.4	0.00026	21.5	0.2	2.3	2	1	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_Gly3P_dh_N	PF01210.23	gi|289595871|ref|YP_003482567.1|	-	0.0027	17.7	0.1	0.058	13.4	0.1	2.5	2	1	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
PBP_GOBP	PF01395.22	gi|289595871|ref|YP_003482567.1|	-	0.12	12.5	0.1	0.25	11.5	0.0	1.6	1	1	0	1	1	1	0	PBP/GOBP	family
GtrA	PF04138.14	gi|289595872|ref|YP_003482568.1|	-	4.1e-16	59.3	7.6	5.5e-16	58.8	7.3	1.3	1	1	0	1	1	1	1	GtrA-like	protein
SPC25	PF06703.11	gi|289595872|ref|YP_003482568.1|	-	0.014	15.2	0.3	0.022	14.5	0.0	1.5	2	0	0	2	2	2	0	Microsomal	signal	peptidase	25	kDa	subunit	(SPC25)
Zip	PF02535.22	gi|289595872|ref|YP_003482568.1|	-	0.099	11.8	0.1	0.12	11.5	0.1	1.1	1	0	0	1	1	1	0	ZIP	Zinc	transporter
DUF1129	PF06570.11	gi|289595872|ref|YP_003482568.1|	-	0.23	10.9	2.9	0.28	10.6	2.9	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1129)
TPR_1	PF00515.28	gi|289595873|ref|YP_003482569.1|	-	7.3e-40	133.2	31.0	4.7e-09	35.7	1.2	7.1	7	0	0	7	7	7	5	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|289595873|ref|YP_003482569.1|	-	5.5e-37	122.9	28.1	3.8e-07	29.7	0.5	7.0	7	0	0	7	7	7	5	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|289595873|ref|YP_003482569.1|	-	1.5e-31	105.9	30.0	1e-07	31.6	0.9	6.6	6	1	1	7	7	6	5	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|289595873|ref|YP_003482569.1|	-	3e-24	83.6	14.6	5.9e-06	26.7	0.7	6.9	1	1	6	7	7	7	5	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|289595873|ref|YP_003482569.1|	-	1.3e-23	83.4	12.7	8.5e-07	29.5	0.0	5.3	2	1	4	6	6	6	5	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|289595873|ref|YP_003482569.1|	-	3.2e-22	78.8	18.3	5.1e-08	33.3	0.0	4.6	2	1	3	5	5	5	5	Tetratricopeptide	repeat
TPR_11	PF13414.6	gi|289595873|ref|YP_003482569.1|	-	3.4e-22	77.8	21.3	1.1e-05	25.1	0.2	5.9	4	2	2	6	6	6	4	TPR	repeat
TPR_17	PF13431.6	gi|289595873|ref|YP_003482569.1|	-	4.6e-19	67.3	19.9	1.5e-06	28.2	0.3	6.5	7	1	0	7	7	6	4	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|289595873|ref|YP_003482569.1|	-	6.5e-19	68.0	17.1	2.3e-08	34.2	3.2	5.4	3	3	1	4	4	4	3	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|289595873|ref|YP_003482569.1|	-	3.1e-16	59.3	11.8	2.1e-07	31.1	0.2	3.7	2	1	2	4	4	4	3	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_6	PF13174.6	gi|289595873|ref|YP_003482569.1|	-	5.3e-16	58.1	16.4	0.00076	20.0	0.2	6.3	6	1	1	7	7	6	4	Tetratricopeptide	repeat
TPR_9	PF13371.6	gi|289595873|ref|YP_003482569.1|	-	4.9e-15	55.4	10.3	6e-06	26.3	0.4	4.7	3	1	2	5	5	5	4	Tetratricopeptide	repeat
TPR_7	PF13176.6	gi|289595873|ref|YP_003482569.1|	-	8.2e-14	50.5	13.3	0.0097	15.9	0.7	6.2	5	2	2	7	7	7	4	Tetratricopeptide	repeat
TPR_10	PF13374.6	gi|289595873|ref|YP_003482569.1|	-	6e-08	32.3	16.6	0.37	10.7	1.9	7.0	7	0	0	7	7	7	2	Tetratricopeptide	repeat
TPR_15	PF13429.6	gi|289595873|ref|YP_003482569.1|	-	2.4e-07	30.3	9.8	2.4e-07	30.3	9.8	1.8	1	1	0	1	1	1	1	Tetratricopeptide	repeat
SRP_TPR_like	PF17004.5	gi|289595873|ref|YP_003482569.1|	-	3.2e-07	30.4	8.6	0.0026	17.8	0.9	2.4	2	0	0	2	2	2	2	Putative	TPR-like	repeat
ChAPs	PF09295.10	gi|289595873|ref|YP_003482569.1|	-	1.8e-06	27.2	2.0	4.5e-06	25.9	0.2	2.1	1	1	1	2	2	2	1	ChAPs	(Chs5p-Arf1p-binding	proteins)
FAT	PF02259.23	gi|289595873|ref|YP_003482569.1|	-	3.6e-05	23.2	5.1	0.011	14.9	0.2	3.0	1	1	1	2	2	2	2	FAT	domain
Fis1_TPR_C	PF14853.6	gi|289595873|ref|YP_003482569.1|	-	3.7e-05	23.7	24.0	1.2	9.3	0.1	6.9	3	3	4	7	7	7	2	Fis1	C-terminal	tetratricopeptide	repeat
TPR_20	PF14561.6	gi|289595873|ref|YP_003482569.1|	-	3.8e-05	23.9	9.9	0.21	12.0	0.9	4.8	1	1	3	5	5	5	1	Tetratricopeptide	repeat
Coatomer_E	PF04733.14	gi|289595873|ref|YP_003482569.1|	-	0.00013	21.5	7.2	0.0022	17.5	3.1	2.3	1	1	1	2	2	2	1	Coatomer	epsilon	subunit
NARP1	PF12569.8	gi|289595873|ref|YP_003482569.1|	-	0.00023	20.2	14.4	0.0022	17.0	7.0	2.9	1	1	2	3	3	3	2	NMDA	receptor-regulated	protein	1
TPR_MalT	PF17874.1	gi|289595873|ref|YP_003482569.1|	-	0.00031	20.2	1.2	0.025	13.9	0.1	2.6	2	1	1	3	3	3	1	MalT-like	TPR	region
DUF3856	PF12968.7	gi|289595873|ref|YP_003482569.1|	-	0.00052	20.1	2.5	0.015	15.4	0.4	3.7	1	1	3	4	4	4	1	Domain	of	Unknown	Function	(DUF3856)
DUF3808	PF10300.9	gi|289595873|ref|YP_003482569.1|	-	0.0034	16.2	6.3	0.024	13.4	0.8	2.3	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF3808)
BTAD	PF03704.17	gi|289595873|ref|YP_003482569.1|	-	0.0083	16.6	6.7	0.059	13.8	1.0	3.1	2	1	1	3	3	3	1	Bacterial	transcriptional	activator	domain
Sigma70_r3	PF04539.16	gi|289595873|ref|YP_003482569.1|	-	0.021	14.9	2.4	1.1	9.4	1.6	2.9	2	0	0	2	2	2	0	Sigma-70	region	3
ANAPC5	PF12862.7	gi|289595873|ref|YP_003482569.1|	-	0.048	13.7	3.7	3.6	7.7	0.6	3.8	1	1	2	3	3	3	0	Anaphase-promoting	complex	subunit	5
HrpB1_HrpK	PF09613.10	gi|289595873|ref|YP_003482569.1|	-	0.056	13.1	1.5	2.9	7.5	0.0	3.5	1	1	3	4	4	4	0	Bacterial	type	III	secretion	protein	(HrpB1_HrpK)
HEAT_2	PF13646.6	gi|289595873|ref|YP_003482569.1|	-	0.066	13.6	0.8	0.38	11.2	0.1	2.4	2	1	0	2	2	2	0	HEAT	repeats
SHNi-TPR	PF10516.9	gi|289595873|ref|YP_003482569.1|	-	0.071	12.6	5.4	1.9	8.0	0.0	3.8	3	0	0	3	3	3	0	SHNi-TPR
FeoB_Cyto	PF17910.1	gi|289595873|ref|YP_003482569.1|	-	0.12	13.0	7.5	0.68	10.5	1.7	2.5	2	0	0	2	2	2	0	FeoB	cytosolic	helical	domain
DUF2795	PF11387.8	gi|289595873|ref|YP_003482569.1|	-	0.12	12.6	1.2	0.4	10.9	1.2	1.9	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2795)
RNA_pol_Rpb6	PF01192.22	gi|289595873|ref|YP_003482569.1|	-	0.13	12.2	1.9	0.75	9.8	1.9	2.2	1	1	0	1	1	1	0	RNA	polymerase	Rpb6
Type_III_YscX	PF09474.10	gi|289595873|ref|YP_003482569.1|	-	0.19	12.0	1.3	5	7.5	0.2	2.8	2	1	1	3	3	3	0	Type	III	secretion	system	YscX	(type_III_YscX)
TPR_5	PF12688.7	gi|289595873|ref|YP_003482569.1|	-	0.34	11.2	2.7	1.4	9.2	0.1	2.8	3	1	0	3	3	3	0	Tetratrico	peptide	repeat
PPR	PF01535.20	gi|289595873|ref|YP_003482569.1|	-	0.68	10.3	6.2	13	6.3	0.0	4.8	5	0	0	5	5	4	0	PPR	repeat
Wzy_C_2	PF11846.8	gi|289595873|ref|YP_003482569.1|	-	1	9.3	4.2	2.6	7.9	0.8	2.7	2	1	1	3	3	3	0	Virulence	factor	membrane-bound	polymerase,	C-terminal
HBB	PF06777.11	gi|289595874|ref|YP_003482570.1|	-	3.7e-56	189.8	0.2	1e-55	188.4	0.0	1.8	2	0	0	2	2	2	1	Helical	and	beta-bridge	domain
Helicase_C_2	PF13307.6	gi|289595874|ref|YP_003482570.1|	-	3.9e-35	121.5	0.0	8.6e-35	120.4	0.0	1.5	1	0	0	1	1	1	1	Helicase	C-terminal	domain
DEAD_2	PF06733.15	gi|289595874|ref|YP_003482570.1|	-	3.1e-30	105.1	0.0	4.9e-30	104.4	0.0	1.3	1	0	0	1	1	1	1	DEAD_2
ResIII	PF04851.15	gi|289595874|ref|YP_003482570.1|	-	7.9e-10	39.0	0.1	4e-09	36.7	0.0	2.1	2	1	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
DEAD	PF00270.29	gi|289595874|ref|YP_003482570.1|	-	9.9e-08	31.9	0.2	1.2e-06	28.4	0.0	2.3	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
Terminase_6	PF03237.15	gi|289595874|ref|YP_003482570.1|	-	0.0019	17.9	0.0	0.0052	16.5	0.0	1.8	2	0	0	2	2	2	1	Terminase-like	family
T2SSE	PF00437.20	gi|289595874|ref|YP_003482570.1|	-	0.026	13.6	0.0	0.054	12.5	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
PhoH	PF02562.16	gi|289595874|ref|YP_003482570.1|	-	0.033	13.6	0.1	0.12	11.8	0.0	1.8	2	0	0	2	2	2	0	PhoH-like	protein
zf-MYST	PF17772.1	gi|289595874|ref|YP_003482570.1|	-	0.067	12.8	0.0	0.2	11.3	0.0	1.8	1	0	0	1	1	1	0	MYST	family	zinc	finger	domain
TIR_2	PF13676.6	gi|289595874|ref|YP_003482570.1|	-	0.077	13.6	0.0	0.2	12.3	0.0	1.7	1	0	0	1	1	1	0	TIR	domain
ATPase	PF06745.13	gi|289595874|ref|YP_003482570.1|	-	0.081	12.3	0.0	0.38	10.1	0.0	2.0	2	0	0	2	2	2	0	KaiC
DUF2179	PF10035.9	gi|289595874|ref|YP_003482570.1|	-	0.083	12.6	0.1	0.34	10.7	0.1	2.0	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2179)
SWI2_SNF2	PF18766.1	gi|289595874|ref|YP_003482570.1|	-	0.089	12.4	0.1	0.8	9.3	0.1	2.3	1	1	0	1	1	1	0	SWI2/SNF2	ATPase
MEDS	PF14417.6	gi|289595874|ref|YP_003482570.1|	-	0.11	12.3	0.0	0.3	10.9	0.0	1.7	1	0	0	1	1	1	0	MEDS:	MEthanogen/methylotroph,	DcmR	Sensory	domain
AAA_30	PF13604.6	gi|289595874|ref|YP_003482570.1|	-	0.18	11.5	0.0	0.35	10.5	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
DEAD_assoc	PF08494.11	gi|289595875|ref|YP_003482571.1|	-	1.3e-57	194.7	0.0	2.3e-57	193.9	0.0	1.4	1	0	0	1	1	1	1	DEAD/H	associated
DEAD	PF00270.29	gi|289595875|ref|YP_003482571.1|	-	1.2e-29	103.3	0.0	3e-29	102.0	0.0	1.7	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.31	gi|289595875|ref|YP_003482571.1|	-	1e-16	61.2	0.1	4e-15	56.1	0.1	2.8	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.15	gi|289595875|ref|YP_003482571.1|	-	8.3e-10	38.9	0.0	2.7e-09	37.2	0.0	1.8	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
TrmB	PF01978.19	gi|289595875|ref|YP_003482571.1|	-	0.0033	17.3	13.2	5.2	7.0	0.4	5.7	5	0	0	5	5	5	2	Sugar-specific	transcriptional	regulator	TrmB
Sigma70_r3	PF04539.16	gi|289595875|ref|YP_003482571.1|	-	0.054	13.6	0.6	2.7	8.2	0.2	2.8	2	0	0	2	2	2	0	Sigma-70	region	3
T2SSE	PF00437.20	gi|289595875|ref|YP_003482571.1|	-	0.099	11.7	0.0	0.21	10.6	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
SNF2_N	PF00176.23	gi|289595875|ref|YP_003482571.1|	-	0.11	11.2	0.0	0.27	9.9	0.0	1.6	1	0	0	1	1	1	0	SNF2	family	N-terminal	domain
DUF433	PF04255.14	gi|289595875|ref|YP_003482571.1|	-	0.11	12.3	0.1	1.6	8.7	0.1	3.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF433)
HTH_9	PF08221.11	gi|289595875|ref|YP_003482571.1|	-	0.18	12.0	0.1	49	4.1	0.0	3.8	4	0	0	4	4	4	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
Hydrolase_3	PF08282.12	gi|289595875|ref|YP_003482571.1|	-	1.8	8.3	6.1	4.1	7.1	0.0	3.4	3	0	0	3	3	3	0	haloacid	dehalogenase-like	hydrolase
IF2_N	PF04760.15	gi|289595875|ref|YP_003482571.1|	-	2.5	8.0	5.8	3	7.7	1.5	3.3	2	0	0	2	2	2	0	Translation	initiation	factor	IF-2,	N-terminal	region
SDH_alpha	PF03313.15	gi|289595876|ref|YP_003482572.1|	-	9.8e-66	222.1	8.7	1.1e-65	221.9	8.7	1.0	1	0	0	1	1	1	1	Serine	dehydratase	alpha	chain
SDH_beta	PF03315.15	gi|289595877|ref|YP_003482573.1|	-	5.8e-16	59.2	0.4	4.2e-14	53.2	0.4	2.2	1	1	0	1	1	1	1	Serine	dehydratase	beta	chain
Aconitase_C	PF00694.19	gi|289595878|ref|YP_003482574.1|	-	1.9e-14	54.1	0.2	3.6e-14	53.2	0.2	1.5	1	1	0	1	1	1	1	Aconitase	C-terminal	domain
Aconitase_2_N	PF06434.13	gi|289595878|ref|YP_003482574.1|	-	0.00015	21.5	0.1	0.012	15.2	0.1	2.1	1	1	0	1	1	1	1	Aconitate	hydratase	2	N-terminus
Relaxase	PF03432.14	gi|289595878|ref|YP_003482574.1|	-	0.24	11.0	0.0	0.71	9.4	0.0	1.6	2	0	0	2	2	2	0	Relaxase/Mobilisation	nuclease	domain
EamA	PF00892.20	gi|289595879|ref|YP_003482575.1|	-	3.9e-39	134.0	47.5	4.1e-20	72.3	18.2	2.0	2	0	0	2	2	2	2	EamA-like	transporter	family
TPT	PF03151.16	gi|289595879|ref|YP_003482575.1|	-	9.2e-07	28.5	18.4	7.3e-05	22.3	5.7	2.1	1	1	1	2	2	2	2	Triose-phosphate	Transporter	family
PUNUT	PF16913.5	gi|289595879|ref|YP_003482575.1|	-	4.6e-05	22.8	19.9	0.036	13.3	2.8	2.6	1	1	1	2	2	2	2	Purine	nucleobase	transmembrane	transport
FtsL	PF04999.13	gi|289595879|ref|YP_003482575.1|	-	0.013	15.5	1.6	0.25	11.4	0.5	2.8	2	0	0	2	2	2	0	Cell	division	protein	FtsL
Collectrin	PF16959.5	gi|289595879|ref|YP_003482575.1|	-	0.24	11.1	1.7	0.51	10.1	1.7	1.6	1	0	0	1	1	1	0	Renal	amino	acid	transporter
TMEM234	PF10639.9	gi|289595879|ref|YP_003482575.1|	-	1	9.4	12.3	0.58	10.2	3.6	3.7	3	1	0	3	3	3	0	Putative	transmembrane	family	234
SLC3A2_N	PF16028.5	gi|289595879|ref|YP_003482575.1|	-	2.1	7.9	6.3	0.2	11.2	0.7	2.3	2	0	0	2	2	2	0	Solute	carrier	family	3	member	2	N-terminus
Fumarate_red_C	PF02300.17	gi|289595879|ref|YP_003482575.1|	-	7.7	6.6	9.4	1.4	9.0	5.3	2.0	2	0	0	2	2	2	0	Fumarate	reductase	subunit	C
SIR2	PF02146.17	gi|289595880|ref|YP_003482576.1|	-	3.7e-54	183.3	0.0	4.5e-54	183.0	0.0	1.1	1	0	0	1	1	1	1	Sir2	family
TPP_enzyme_M	PF00205.22	gi|289595880|ref|YP_003482576.1|	-	1.5e-05	24.7	0.0	0.0019	17.9	0.0	2.3	2	0	0	2	2	2	2	Thiamine	pyrophosphate	enzyme,	central	domain
Tetraspanin	PF00335.20	gi|289595881|ref|YP_003482577.1|	-	0.00069	19.4	1.0	0.0011	18.7	1.0	1.3	1	0	0	1	1	1	1	Tetraspanin	family
Mem_trans	PF03547.18	gi|289595881|ref|YP_003482577.1|	-	0.13	10.6	4.7	0.15	10.4	4.7	1.2	1	0	0	1	1	1	0	Membrane	transport	protein
EI24	PF07264.11	gi|289595881|ref|YP_003482577.1|	-	5.9	7.1	10.6	1.2e+02	2.9	10.4	2.2	1	1	1	2	2	2	0	Etoposide-induced	protein	2.4	(EI24)
Yip1	PF04893.17	gi|289595881|ref|YP_003482577.1|	-	8.8	6.0	13.4	22	4.7	13.4	1.6	1	1	0	1	1	1	0	Yip1	domain
Pribosyltran_N	PF13793.6	gi|289595882|ref|YP_003482578.1|	-	3e-26	91.7	0.0	4.1e-24	84.8	0.0	2.3	2	1	0	2	2	2	2	N-terminal	domain	of	ribose	phosphate	pyrophosphokinase
Pribosyltran	PF00156.27	gi|289595882|ref|YP_003482578.1|	-	1.5e-16	60.3	0.4	2.5e-15	56.3	0.2	2.1	2	0	0	2	2	2	1	Phosphoribosyl	transferase	domain
Pribosyl_synth	PF14572.6	gi|289595882|ref|YP_003482578.1|	-	1.7e-08	34.7	0.3	3.2e-08	33.8	0.3	1.4	1	0	0	1	1	1	1	Phosphoribosyl	synthetase-associated	domain
UPRTase	PF14681.6	gi|289595882|ref|YP_003482578.1|	-	0.0016	17.9	0.0	0.0034	16.8	0.0	1.5	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
PRTase_2	PF15609.6	gi|289595882|ref|YP_003482578.1|	-	0.0051	16.3	0.2	0.018	14.5	0.0	2.0	2	0	0	2	2	2	1	Phosphoribosyl	transferase
DUF1611	PF07755.11	gi|289595883|ref|YP_003482579.1|	-	2.2e-63	213.2	0.0	2.9e-63	212.8	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1611_C)	P-loop	domain
DUF1611_N	PF17396.2	gi|289595883|ref|YP_003482579.1|	-	5.5e-30	103.5	0.1	4.3e-29	100.6	0.0	2.3	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF1611_N)	Rossmann-like	domain
AAA_26	PF13500.6	gi|289595883|ref|YP_003482579.1|	-	0.022	14.6	0.1	0.11	12.2	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
Tyr-DNA_phospho	PF06087.12	gi|289595884|ref|YP_003482580.1|	-	0.11	11.4	0.1	0.15	10.9	0.1	1.1	1	0	0	1	1	1	0	Tyrosyl-DNA	phosphodiesterase
MR_MLE_C	PF13378.6	gi|289595885|ref|YP_003482581.1|	-	3.6e-46	157.5	0.0	4.9e-46	157.0	0.0	1.1	1	0	0	1	1	1	1	Enolase	C-terminal	domain-like
MR_MLE_N	PF02746.16	gi|289595885|ref|YP_003482581.1|	-	1.2e-17	64.2	0.0	2.4e-17	63.2	0.0	1.5	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	N-terminal	domain
MAAL_C	PF07476.11	gi|289595885|ref|YP_003482581.1|	-	0.0022	17.2	0.1	0.0041	16.3	0.1	1.4	1	0	0	1	1	1	1	Methylaspartate	ammonia-lyase	C-terminus
Tubulin	PF00091.25	gi|289595886|ref|YP_003482582.1|	-	1.2e-07	32.1	0.0	1.3e-06	28.7	0.0	2.1	2	0	0	2	2	2	1	Tubulin/FtsZ	family,	GTPase	domain
GCD14	PF08704.10	gi|289595887|ref|YP_003482583.1|	-	9.1e-29	100.8	0.0	3.1e-28	99.1	0.0	1.7	1	1	1	2	2	2	1	tRNA	methyltransferase	complex	GCD14	subunit
PCMT	PF01135.19	gi|289595887|ref|YP_003482583.1|	-	8.8e-05	22.3	0.0	0.00011	22.0	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_31	PF13847.6	gi|289595887|ref|YP_003482583.1|	-	0.00063	19.6	0.0	0.0011	18.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|289595887|ref|YP_003482583.1|	-	0.0012	19.5	0.0	0.0023	18.6	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.18	gi|289595887|ref|YP_003482583.1|	-	0.036	13.8	0.1	1.5	8.5	0.1	2.4	2	1	0	2	2	2	0	Putative	RNA	methylase	family	UPF0020
Methyltransf_11	PF08241.12	gi|289595887|ref|YP_003482583.1|	-	0.037	14.7	0.0	0.075	13.7	0.0	1.6	1	1	0	1	1	1	0	Methyltransferase	domain
DUF1460	PF07313.12	gi|289595887|ref|YP_003482583.1|	-	0.066	12.6	0.0	0.27	10.6	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1460)
Methyltransf_3	PF01596.17	gi|289595887|ref|YP_003482583.1|	-	0.071	12.3	0.0	0.1	11.7	0.0	1.3	1	0	0	1	1	1	0	O-methyltransferase
RrnaAD	PF00398.20	gi|289595887|ref|YP_003482583.1|	-	0.077	12.0	0.0	0.11	11.6	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	RNA	adenine	dimethylase
Methyltransf_16	PF10294.9	gi|289595887|ref|YP_003482583.1|	-	0.084	12.6	0.0	0.16	11.7	0.0	1.5	1	0	0	1	1	1	0	Lysine	methyltransferase
SUI1	PF01253.22	gi|289595888|ref|YP_003482584.1|	-	9.1e-23	80.6	0.3	2.9e-22	79.0	0.2	1.7	1	1	1	2	2	2	1	Translation	initiation	factor	SUI1
Img2	PF05046.14	gi|289595888|ref|YP_003482584.1|	-	0.007	16.6	0.3	0.012	15.9	0.3	1.4	1	1	0	1	1	1	1	Mitochondrial	large	subunit	ribosomal	protein	(Img2)
DUF4222	PF13973.6	gi|289595888|ref|YP_003482584.1|	-	0.088	12.4	0.0	1.6	8.4	0.1	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4222)
Helicase_RecD	PF05127.14	gi|289595889|ref|YP_003482585.1|	-	1.1e-50	172.0	0.0	2e-50	171.1	0.0	1.5	1	0	0	1	1	1	1	Helicase
GNAT_acetyltr_2	PF13718.6	gi|289595889|ref|YP_003482585.1|	-	2.8e-43	147.9	0.1	2.1e-28	99.3	0.0	2.4	1	1	1	2	2	2	2	GNAT	acetyltransferase	2
DUF1726	PF08351.11	gi|289595889|ref|YP_003482585.1|	-	3.2e-28	97.5	0.0	5.4e-27	93.6	0.0	2.7	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1726)
tRNA_bind_2	PF13725.6	gi|289595889|ref|YP_003482585.1|	-	3.6e-08	33.4	0.0	1.4e-07	31.5	0.0	2.0	1	1	0	1	1	1	1	Possible	tRNA	binding	domain
AAA_30	PF13604.6	gi|289595889|ref|YP_003482585.1|	-	0.0014	18.4	0.0	0.0089	15.8	0.0	2.1	1	1	1	2	2	2	1	AAA	domain
Acetyltransf_7	PF13508.7	gi|289595889|ref|YP_003482585.1|	-	0.036	14.5	0.0	0.23	11.9	0.0	2.4	3	0	0	3	3	3	0	Acetyltransferase	(GNAT)	domain
ASCH	PF04266.14	gi|289595890|ref|YP_003482586.1|	-	4.2e-13	49.8	0.4	5e-13	49.6	0.4	1.0	1	0	0	1	1	1	1	ASCH	domain
Hen1_Lam_C	PF18441.1	gi|289595890|ref|YP_003482586.1|	-	0.036	13.9	0.0	0.044	13.6	0.0	1.2	1	0	0	1	1	1	0	Hen1	La-motif	C-terminal	domain
CBS	PF00571.28	gi|289595892|ref|YP_003482588.1|	-	2.3e-23	82.4	6.1	5.6e-13	49.1	0.7	2.2	2	0	0	2	2	2	2	CBS	domain
V4R	PF02830.18	gi|289595893|ref|YP_003482589.1|	-	1.8e-10	40.7	0.0	2.5e-10	40.2	0.0	1.2	1	0	0	1	1	1	1	V4R	domain
MetOD1	PF18546.1	gi|289595893|ref|YP_003482589.1|	-	0.017	15.1	0.4	0.05	13.6	0.1	1.9	2	0	0	2	2	2	0	Metanogen	output	domain	1
Robl_LC7	PF03259.17	gi|289595894|ref|YP_003482590.1|	-	0.02	14.7	0.0	0.023	14.4	0.0	1.1	1	0	0	1	1	1	0	Roadblock/LC7	domain
Spore_GerQ	PF09671.10	gi|289595894|ref|YP_003482590.1|	-	0.032	14.2	0.0	0.043	13.8	0.0	1.2	1	0	0	1	1	1	0	Spore	coat	protein	(Spore_GerQ)
adh_short_C2	PF13561.6	gi|289595895|ref|YP_003482591.1|	-	2.1e-65	220.6	0.0	2.3e-65	220.4	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.25	gi|289595895|ref|YP_003482591.1|	-	8.6e-55	185.2	0.1	1e-54	185.0	0.1	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.10	gi|289595895|ref|YP_003482591.1|	-	1.3e-16	61.0	0.0	1.8e-16	60.6	0.0	1.1	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.21	gi|289595895|ref|YP_003482591.1|	-	0.00064	19.2	0.1	0.0011	18.5	0.1	1.5	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
IreB	PF06135.12	gi|289595895|ref|YP_003482591.1|	-	0.045	13.9	0.0	0.16	12.2	0.0	1.9	1	0	0	1	1	1	0	IreB	regulatory	phosphoprotein
ZapA	PF05164.13	gi|289595895|ref|YP_003482591.1|	-	0.067	13.6	0.2	0.18	12.3	0.2	1.8	1	0	0	1	1	1	0	Cell	division	protein	ZapA
THF_DHG_CYH_C	PF02882.19	gi|289595895|ref|YP_003482591.1|	-	0.078	12.3	0.0	0.29	10.4	0.0	1.9	2	0	0	2	2	2	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
HAD_2	PF13419.6	gi|289595896|ref|YP_003482592.1|	-	4.4e-38	131.1	0.4	5.5e-38	130.8	0.4	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.26	gi|289595896|ref|YP_003482592.1|	-	6.3e-19	69.1	0.1	1.7e-12	48.1	0.1	2.1	1	1	1	2	2	2	2	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.6	gi|289595896|ref|YP_003482592.1|	-	2.4e-12	46.7	0.0	4.3e-12	45.9	0.0	1.3	1	0	0	1	1	1	1	HAD-hyrolase-like
HAD	PF12710.7	gi|289595896|ref|YP_003482592.1|	-	3.2e-10	40.7	0.0	4.3e-10	40.3	0.0	1.2	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
PNK3P	PF08645.11	gi|289595896|ref|YP_003482592.1|	-	0.0086	15.8	0.5	0.048	13.4	0.5	2.0	1	1	0	1	1	1	1	Polynucleotide	kinase	3	phosphatase
Put_Phosphatase	PF06888.12	gi|289595896|ref|YP_003482592.1|	-	0.009	15.4	0.1	0.49	9.8	0.0	2.1	2	0	0	2	2	2	1	Putative	Phosphatase
Hydrolase_3	PF08282.12	gi|289595896|ref|YP_003482592.1|	-	0.014	15.1	0.4	0.2	11.4	0.1	2.2	2	0	0	2	2	2	0	haloacid	dehalogenase-like	hydrolase
DUF2608	PF11019.8	gi|289595896|ref|YP_003482592.1|	-	0.048	13.1	0.0	0.082	12.4	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2608)
NT5C	PF06941.12	gi|289595896|ref|YP_003482592.1|	-	0.16	11.9	0.0	0.32	10.9	0.0	1.5	1	1	0	1	1	1	0	5'	nucleotidase,	deoxy	(Pyrimidine),	cytosolic	type	C	protein	(NT5C)
NIF	PF03031.18	gi|289595896|ref|YP_003482592.1|	-	0.16	11.7	0.3	0.51	10.1	0.3	1.9	1	1	0	1	1	1	0	NLI	interacting	factor-like	phosphatase
PCMT	PF01135.19	gi|289595897|ref|YP_003482593.1|	-	1.5e-64	217.6	0.0	1.7e-64	217.4	0.0	1.0	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_23	PF13489.6	gi|289595897|ref|YP_003482593.1|	-	0.00012	21.9	0.0	0.00015	21.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_3	PF01596.17	gi|289595897|ref|YP_003482593.1|	-	0.00013	21.2	0.0	0.00037	19.7	0.0	1.6	2	0	0	2	2	2	1	O-methyltransferase
Methyltransf_11	PF08241.12	gi|289595897|ref|YP_003482593.1|	-	0.00026	21.6	0.0	0.00044	20.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|289595897|ref|YP_003482593.1|	-	0.00045	20.9	0.0	0.00073	20.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.20	gi|289595897|ref|YP_003482593.1|	-	0.0023	17.3	0.0	0.0031	16.9	0.0	1.1	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_18	PF12847.7	gi|289595897|ref|YP_003482593.1|	-	0.016	15.2	0.0	0.026	14.5	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|289595897|ref|YP_003482593.1|	-	0.029	14.2	0.0	0.037	13.8	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
GCD14	PF08704.10	gi|289595897|ref|YP_003482593.1|	-	0.1	12.2	0.0	0.12	12.0	0.0	1.2	1	0	0	1	1	1	0	tRNA	methyltransferase	complex	GCD14	subunit
DUF3040	PF11239.8	gi|289595898|ref|YP_003482594.1|	-	0.055	13.7	1.8	0.23	11.7	1.5	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3040)
NDUF_B12	PF08122.12	gi|289595898|ref|YP_003482594.1|	-	0.15	12.2	0.5	0.28	11.2	0.0	1.7	2	0	0	2	2	2	0	NADH-ubiquinone	oxidoreductase	B12	subunit	family
Adeno_E3B	PF03376.14	gi|289595898|ref|YP_003482594.1|	-	0.48	10.7	3.6	0.49	10.7	0.9	2.1	1	1	1	2	2	2	0	Adenovirus	E3B	protein
DUF5373	PF17343.2	gi|289595898|ref|YP_003482594.1|	-	3	7.6	5.5	7.1	6.4	5.5	1.7	1	1	0	1	1	1	0	Family	of	unknown	function	(DUF5373)
CPBP	PF02517.16	gi|289595898|ref|YP_003482594.1|	-	5.4	7.5	5.9	44	4.5	5.9	2.2	1	1	0	1	1	1	0	CPBP	intramembrane	metalloprotease
DUF1749	PF08538.10	gi|289595899|ref|YP_003482595.1|	-	5.5e-14	52.0	0.0	1.1e-13	51.0	0.0	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1749)
Abhydrolase_1	PF00561.20	gi|289595899|ref|YP_003482595.1|	-	2.1e-08	34.2	0.1	1.2e-06	28.4	0.0	2.2	1	1	0	2	2	2	1	alpha/beta	hydrolase	fold
Hydrolase_4	PF12146.8	gi|289595899|ref|YP_003482595.1|	-	4.6e-07	29.3	0.1	2.6e-05	23.6	0.1	2.3	2	0	0	2	2	2	1	Serine	aminopeptidase,	S33
Abhydrolase_6	PF12697.7	gi|289595899|ref|YP_003482595.1|	-	9e-06	26.4	0.0	1.3e-05	25.9	0.0	1.2	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
DUF3530	PF12048.8	gi|289595899|ref|YP_003482595.1|	-	0.0006	19.3	0.0	0.00087	18.8	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3530)
DUF900	PF05990.12	gi|289595899|ref|YP_003482595.1|	-	0.051	13.1	0.1	0.36	10.3	0.1	2.0	1	1	0	1	1	1	0	Alpha/beta	hydrolase	of	unknown	function	(DUF900)
Ser_hydrolase	PF06821.13	gi|289595899|ref|YP_003482595.1|	-	0.054	13.4	0.0	0.13	12.1	0.0	1.6	2	0	0	2	2	2	0	Serine	hydrolase
DLH	PF01738.18	gi|289595899|ref|YP_003482595.1|	-	0.088	12.3	0.0	1.1	8.7	0.0	2.1	2	0	0	2	2	2	0	Dienelactone	hydrolase	family
LCAT	PF02450.15	gi|289595899|ref|YP_003482595.1|	-	0.16	11.1	0.0	5.8	6.0	0.0	2.2	2	0	0	2	2	2	0	Lecithin:cholesterol	acyltransferase
DUF4342	PF14242.6	gi|289595899|ref|YP_003482595.1|	-	0.17	11.9	0.0	0.44	10.6	0.0	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4342)
HD	PF01966.22	gi|289595900|ref|YP_003482596.1|	-	2.1e-10	40.9	0.8	3.5e-10	40.2	0.8	1.3	1	0	0	1	1	1	1	HD	domain
HDOD	PF08668.12	gi|289595900|ref|YP_003482596.1|	-	3.4e-05	23.4	0.1	0.0033	16.9	0.1	2.1	1	1	0	1	1	1	1	HDOD	domain
CMD	PF02627.20	gi|289595901|ref|YP_003482597.1|	-	2.8e-20	72.1	0.2	3.3e-20	71.9	0.2	1.1	1	0	0	1	1	1	1	Carboxymuconolactone	decarboxylase	family
Pur_DNA_glyco	PF02245.16	gi|289595902|ref|YP_003482598.1|	-	1.3e-49	168.1	0.0	1.6e-49	167.7	0.0	1.1	1	0	0	1	1	1	1	Methylpurine-DNA	glycosylase	(MPG)
DUF87	PF01935.17	gi|289595902|ref|YP_003482598.1|	-	0.17	11.9	0.0	0.27	11.3	0.0	1.4	1	0	0	1	1	1	0	Helicase	HerA,	central	domain
Sec61_beta	PF03911.16	gi|289595903|ref|YP_003482599.1|	-	9.6e-16	57.5	0.1	1.1e-15	57.3	0.1	1.1	1	0	0	1	1	1	1	Sec61beta	family
YARHG	PF13308.6	gi|289595903|ref|YP_003482599.1|	-	0.0082	16.0	0.0	0.0085	16.0	0.0	1.1	1	0	0	1	1	1	1	YARHG	domain
Nre_N	PF04894.12	gi|289595904|ref|YP_003482600.1|	-	2.7e-89	299.6	0.0	3.3e-89	299.3	0.0	1.1	1	0	0	1	1	1	1	Archaeal	Nre,	N-terminal
Nre_C	PF04895.12	gi|289595904|ref|YP_003482600.1|	-	8.8e-37	125.4	0.4	8.8e-37	125.4	0.4	1.8	2	0	0	2	2	2	1	Archaeal	Nre,	C-terminal
tRNA_deacylase	PF04414.12	gi|289595905|ref|YP_003482601.1|	-	7.8e-72	241.1	0.3	9.6e-72	240.8	0.3	1.1	1	0	0	1	1	1	1	D-aminoacyl-tRNA	deacylase
TPR_19	PF14559.6	gi|289595906|ref|YP_003482602.1|	-	3.1e-22	78.9	14.1	1.4e-06	28.7	0.0	7.4	4	2	3	7	7	7	4	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|289595906|ref|YP_003482602.1|	-	2.3e-12	46.6	4.4	0.48	11.4	0.1	8.2	4	1	4	9	9	9	3	Tetratricopeptide	repeat
TPR_11	PF13414.6	gi|289595906|ref|YP_003482602.1|	-	4.5e-12	45.4	12.4	0.00016	21.3	0.0	5.6	3	1	3	6	6	6	3	TPR	repeat
TPR_17	PF13431.6	gi|289595906|ref|YP_003482602.1|	-	5.6e-12	45.2	10.8	0.0056	17.0	0.0	7.0	6	1	1	7	7	7	3	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|289595906|ref|YP_003482602.1|	-	2.8e-08	34.3	1.6	4.1e-05	24.1	0.3	5.1	7	0	0	7	7	7	1	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|289595906|ref|YP_003482602.1|	-	1.7e-07	30.9	14.6	0.59	10.5	0.0	7.6	7	1	1	8	8	7	2	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|289595906|ref|YP_003482602.1|	-	2.3e-07	30.4	22.1	0.003	17.5	0.1	8.5	10	0	0	10	10	9	2	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|289595906|ref|YP_003482602.1|	-	3.4e-06	26.6	22.1	7.1e-05	22.5	0.0	6.7	8	1	0	8	8	7	2	Tetratricopeptide	repeat
TPR_20	PF14561.6	gi|289595906|ref|YP_003482602.1|	-	0.0012	19.1	3.6	0.033	14.5	0.1	3.9	3	1	1	4	4	4	1	Tetratricopeptide	repeat
SPO22	PF08631.10	gi|289595906|ref|YP_003482602.1|	-	0.0022	17.6	3.7	0.36	10.3	0.1	3.5	3	1	0	3	3	3	1	Meiosis	protein	SPO22/ZIP4	like
TPR_21	PF09976.9	gi|289595906|ref|YP_003482602.1|	-	0.0022	17.7	4.4	0.28	10.9	0.1	3.7	2	2	0	2	2	2	1	Tetratricopeptide	repeat-like	domain
TPR_12	PF13424.6	gi|289595906|ref|YP_003482602.1|	-	0.003	17.8	3.2	0.75	10.1	0.1	4.0	4	0	0	4	4	4	1	Tetratricopeptide	repeat
TPR_15	PF13429.6	gi|289595906|ref|YP_003482602.1|	-	0.0075	15.5	1.8	0.38	9.9	1.6	3.2	1	1	1	2	2	2	1	Tetratricopeptide	repeat
TPR_9	PF13371.6	gi|289595906|ref|YP_003482602.1|	-	0.017	15.3	0.2	1.2	9.3	0.1	3.3	1	1	1	2	2	2	0	Tetratricopeptide	repeat
TPR_7	PF13176.6	gi|289595906|ref|YP_003482602.1|	-	0.045	13.8	3.5	3.8	7.8	0.1	4.0	5	0	0	5	5	4	0	Tetratricopeptide	repeat
Complex1_LYR_2	PF13233.6	gi|289595906|ref|YP_003482602.1|	-	0.06	14.1	0.1	0.67	10.8	0.1	2.6	2	0	0	2	2	2	0	Complex1_LYR-like
DUF816	PF05674.12	gi|289595906|ref|YP_003482602.1|	-	0.091	12.7	0.1	0.091	12.7	0.1	3.4	3	1	1	4	4	4	0	Baculovirus	protein	of	unknown	function	(DUF816)
Cytochrom_B562	PF07361.11	gi|289595906|ref|YP_003482602.1|	-	3.9	8.2	6.4	16	6.2	0.2	3.9	4	1	0	4	4	3	0	Cytochrome	b562
HSCB_C	PF07743.13	gi|289595906|ref|YP_003482602.1|	-	9.8	6.7	10.7	0.29	11.6	1.2	3.4	4	1	0	4	4	3	0	HSCB	C-terminal	oligomerisation	domain
Nitroreductase	PF00881.24	gi|289595907|ref|YP_003482603.1|	-	2.7e-26	92.6	0.3	1.7e-14	54.2	0.1	2.1	1	1	1	2	2	2	2	Nitroreductase	family
TM1586_NiRdase	PF14512.6	gi|289595907|ref|YP_003482603.1|	-	5.2e-11	42.5	0.3	0.00062	19.4	0.1	3.0	1	1	2	3	3	3	3	Putative	TM	nitroreductase
POTRA_TamA_1	PF17243.2	gi|289595908|ref|YP_003482604.1|	-	0.029	14.5	0.1	0.032	14.3	0.1	1.2	1	0	0	1	1	1	0	POTRA	domain	TamA	domain	1
CheR_N	PF03705.15	gi|289595908|ref|YP_003482604.1|	-	0.047	13.4	0.0	0.83	9.4	0.0	2.2	2	0	0	2	2	2	0	CheR	methyltransferase,	all-alpha	domain
ATP-sulfurylase	PF01747.17	gi|289595909|ref|YP_003482605.1|	-	7.8e-89	296.7	0.0	1.1e-88	296.3	0.0	1.2	1	0	0	1	1	1	1	ATP-sulfurylase
PUA_2	PF14306.6	gi|289595909|ref|YP_003482605.1|	-	2.6e-45	153.9	0.0	4.7e-45	153.1	0.0	1.4	1	0	0	1	1	1	1	PUA-like	domain
TF_Zn_Ribbon	PF08271.12	gi|289595909|ref|YP_003482605.1|	-	0.00091	18.7	0.1	0.0018	17.7	0.1	1.5	1	0	0	1	1	1	1	TFIIB	zinc-binding
zf-RRN7	PF11781.8	gi|289595909|ref|YP_003482605.1|	-	0.25	11.1	0.8	0.47	10.2	0.8	1.5	1	0	0	1	1	1	0	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
DHH	PF01368.20	gi|289595910|ref|YP_003482606.1|	-	6.1e-06	26.4	0.1	1e-05	25.7	0.1	1.4	1	0	0	1	1	1	1	DHH	family
DHHA1	PF02272.19	gi|289595910|ref|YP_003482606.1|	-	0.0098	16.3	1.4	0.035	14.5	0.1	2.4	1	1	1	2	2	2	1	DHHA1	domain
Sulfotransfer_1	PF00685.27	gi|289595911|ref|YP_003482607.1|	-	3.4e-09	36.6	0.1	7.1e-08	32.3	0.1	2.5	1	1	0	1	1	1	1	Sulfotransferase	domain
Sulfotransfer_3	PF13469.6	gi|289595911|ref|YP_003482607.1|	-	4.6e-09	37.0	0.5	8.5e-06	26.3	0.0	2.2	1	1	1	2	2	2	2	Sulfotransferase	family
Sulfotransfer_4	PF17784.1	gi|289595911|ref|YP_003482607.1|	-	0.15	11.9	0.0	1.9	8.3	0.0	2.0	2	0	0	2	2	2	0	Sulfotransferase	domain
APS_kinase	PF01583.20	gi|289595912|ref|YP_003482608.1|	-	8e-56	188.3	0.0	9.3e-56	188.1	0.0	1.0	1	0	0	1	1	1	1	Adenylylsulphate	kinase
AAA_33	PF13671.6	gi|289595912|ref|YP_003482608.1|	-	3e-09	37.2	0.0	4.3e-09	36.7	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
KTI12	PF08433.10	gi|289595912|ref|YP_003482608.1|	-	2.6e-08	33.7	0.0	3.1e-08	33.4	0.0	1.2	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
AAA_18	PF13238.6	gi|289595912|ref|YP_003482608.1|	-	0.00013	22.5	0.0	0.00018	22.0	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
NTPase_1	PF03266.15	gi|289595912|ref|YP_003482608.1|	-	0.0002	21.3	0.1	0.0006	19.8	0.1	1.9	1	1	1	2	2	2	1	NTPase
AAA_17	PF13207.6	gi|289595912|ref|YP_003482608.1|	-	0.0011	19.3	0.1	0.0041	17.6	0.0	1.9	1	1	1	2	2	2	1	AAA	domain
MeaB	PF03308.16	gi|289595912|ref|YP_003482608.1|	-	0.0034	16.4	0.0	0.0057	15.7	0.0	1.3	1	0	0	1	1	1	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
CbiA	PF01656.23	gi|289595912|ref|YP_003482608.1|	-	0.011	15.8	0.0	0.016	15.2	0.0	1.3	1	0	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Thymidylate_kin	PF02223.17	gi|289595912|ref|YP_003482608.1|	-	0.021	14.5	0.0	0.049	13.3	0.0	1.8	1	1	0	1	1	1	0	Thymidylate	kinase
SRP54	PF00448.22	gi|289595912|ref|YP_003482608.1|	-	0.032	13.9	0.0	0.054	13.1	0.0	1.3	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
MobB	PF03205.14	gi|289595912|ref|YP_003482608.1|	-	0.036	14.0	0.0	0.07	13.0	0.0	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
CPT	PF07931.12	gi|289595912|ref|YP_003482608.1|	-	0.068	13.0	0.1	0.84	9.4	0.1	2.4	1	1	0	1	1	1	0	Chloramphenicol	phosphotransferase-like	protein
AAA_28	PF13521.6	gi|289595912|ref|YP_003482608.1|	-	0.073	13.3	0.0	0.14	12.4	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
6PF2K	PF01591.18	gi|289595912|ref|YP_003482608.1|	-	0.1	11.9	0.0	0.15	11.4	0.0	1.3	1	0	0	1	1	1	0	6-phosphofructo-2-kinase
AAA_16	PF13191.6	gi|289595912|ref|YP_003482608.1|	-	0.11	12.9	0.0	0.15	12.4	0.0	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
ATP_bind_1	PF03029.17	gi|289595912|ref|YP_003482608.1|	-	0.13	12.1	0.0	0.2	11.4	0.0	1.3	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
ParA	PF10609.9	gi|289595912|ref|YP_003482608.1|	-	0.17	11.3	0.0	0.23	10.9	0.0	1.2	1	0	0	1	1	1	0	NUBPL	iron-transfer	P-loop	NTPase
Na_sulph_symp	PF00939.19	gi|289595913|ref|YP_003482609.1|	-	1.2e-54	186.1	50.7	1.5e-54	185.8	50.7	1.1	1	0	0	1	1	1	1	Sodium:sulfate	symporter	transmembrane	region
CitMHS	PF03600.16	gi|289595913|ref|YP_003482609.1|	-	1.9e-40	138.9	95.7	3.6e-31	108.5	56.6	2.0	1	1	1	2	2	2	2	Citrate	transporter
Phosphodiest	PF01663.22	gi|289595915|ref|YP_003482611.1|	-	7.8e-42	144.1	0.1	1e-41	143.7	0.1	1.1	1	0	0	1	1	1	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
WbqC	PF08889.11	gi|289595916|ref|YP_003482612.1|	-	1.1e-83	280.5	0.1	1.2e-83	280.3	0.1	1.0	1	0	0	1	1	1	1	WbqC-like	protein	family
DUF1454	PF07305.12	gi|289595916|ref|YP_003482612.1|	-	0.14	11.6	0.2	0.43	10.0	0.1	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1454)
DUF384	PF04064.13	gi|289595916|ref|YP_003482612.1|	-	0.18	11.7	0.2	0.45	10.4	0.2	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF384)
PIG-L	PF02585.17	gi|289595917|ref|YP_003482613.1|	-	2e-15	57.6	0.0	3.1e-15	56.9	0.0	1.3	1	0	0	1	1	1	1	GlcNAc-PI	de-N-acetylase
Glyco_transf_4	PF13439.6	gi|289595917|ref|YP_003482613.1|	-	0.051	13.6	0.1	0.086	12.8	0.1	1.4	1	0	0	1	1	1	0	Glycosyltransferase	Family	4
UDPG_MGDP_dh_N	PF03721.14	gi|289595918|ref|YP_003482614.1|	-	1.7e-43	148.4	0.1	4e-43	147.2	0.1	1.6	2	0	0	2	2	2	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
UDPG_MGDP_dh	PF00984.19	gi|289595918|ref|YP_003482614.1|	-	3.4e-29	100.9	0.0	6e-29	100.1	0.0	1.4	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	central	domain
UDPG_MGDP_dh_C	PF03720.15	gi|289595918|ref|YP_003482614.1|	-	1.3e-21	77.0	0.0	5.2e-21	75.0	0.0	2.0	2	0	0	2	2	2	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
NAD_binding_2	PF03446.15	gi|289595918|ref|YP_003482614.1|	-	1.1e-09	38.7	0.0	1.4e-07	31.9	0.0	2.5	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
ApbA	PF02558.16	gi|289595918|ref|YP_003482614.1|	-	0.00021	21.0	0.0	0.083	12.5	0.0	2.2	2	0	0	2	2	2	2	Ketopantoate	reductase	PanE/ApbA
F420_oxidored	PF03807.17	gi|289595918|ref|YP_003482614.1|	-	0.0068	17.0	0.1	1.1	9.9	0.0	3.0	2	1	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_Gly3P_dh_N	PF01210.23	gi|289595918|ref|YP_003482614.1|	-	0.014	15.4	0.0	0.41	10.6	0.0	2.3	2	0	0	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Pyr_redox_2	PF07992.14	gi|289595918|ref|YP_003482614.1|	-	0.023	14.0	0.0	1.4	8.1	0.0	2.2	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
TrkA_N	PF02254.18	gi|289595918|ref|YP_003482614.1|	-	0.073	13.3	0.3	1.2	9.4	0.0	2.9	3	1	0	3	3	3	0	TrkA-N	domain
Glycos_transf_1	PF00534.20	gi|289595919|ref|YP_003482615.1|	-	3.7e-18	65.7	0.2	5.7e-18	65.0	0.2	1.2	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|289595919|ref|YP_003482615.1|	-	3.7e-18	66.1	0.0	7.6e-18	65.1	0.0	1.4	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_4_4	PF13579.6	gi|289595919|ref|YP_003482615.1|	-	1.2e-13	51.9	0.0	1.8e-13	51.2	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_1_4	PF13692.6	gi|289595919|ref|YP_003482615.1|	-	4.3e-13	49.8	0.0	6.6e-13	49.2	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_2	PF13477.6	gi|289595919|ref|YP_003482615.1|	-	9.1e-11	42.0	0.0	2e-10	40.8	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferase	4-like
Glyco_trans_1_2	PF13524.6	gi|289595919|ref|YP_003482615.1|	-	0.00025	21.4	0.0	0.00043	20.6	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_5	PF08323.11	gi|289595919|ref|YP_003482615.1|	-	0.0027	17.4	0.1	0.0059	16.3	0.1	1.5	1	1	0	1	1	1	1	Starch	synthase	catalytic	domain
Glycos_transf_4	PF00953.21	gi|289595920|ref|YP_003482616.1|	-	3.8e-35	121.2	10.3	3.8e-35	121.2	10.3	2.3	3	0	0	3	3	3	1	Glycosyl	transferase	family	4
Glycos_transf_1	PF00534.20	gi|289595921|ref|YP_003482617.1|	-	2.6e-31	108.5	0.2	7.4e-31	107.0	0.0	1.8	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|289595921|ref|YP_003482617.1|	-	6.7e-26	91.3	0.0	3.2e-25	89.1	0.0	2.0	3	0	0	3	3	3	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|289595921|ref|YP_003482617.1|	-	5.8e-22	78.5	0.0	9.4e-22	77.8	0.0	1.4	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_1_2	PF13524.6	gi|289595921|ref|YP_003482617.1|	-	2.5e-11	43.8	0.0	1.1e-10	41.8	0.0	2.0	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_4_2	PF13477.6	gi|289595921|ref|YP_003482617.1|	-	3.8e-11	43.2	0.2	7.4e-11	42.2	0.2	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	4-like
Glyco_trans_4_4	PF13579.6	gi|289595921|ref|YP_003482617.1|	-	4.9e-11	43.3	0.0	6.6e-11	42.9	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
DUF1972	PF09314.11	gi|289595921|ref|YP_003482617.1|	-	1.9e-08	34.1	0.3	6.4e-07	29.1	0.3	2.4	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF1972)
Glyco_tran_28_C	PF04101.16	gi|289595921|ref|YP_003482617.1|	-	0.052	13.5	0.2	0.45	10.5	0.0	2.3	3	0	0	3	3	3	0	Glycosyltransferase	family	28	C-terminal	domain
DUF2325	PF10087.9	gi|289595921|ref|YP_003482617.1|	-	0.11	12.7	0.3	1.5	9.0	0.1	2.8	3	0	0	3	3	3	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2325)
SPASM	PF13186.6	gi|289595922|ref|YP_003482618.1|	-	1.2e-11	44.9	0.9	3.1e-11	43.6	0.9	1.8	1	0	0	1	1	1	1	Iron-sulfur	cluster-binding	domain
Radical_SAM	PF04055.21	gi|289595922|ref|YP_003482618.1|	-	9.4e-11	42.4	0.5	1.4e-10	41.8	0.0	1.6	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|289595922|ref|YP_003482618.1|	-	0.00011	22.3	0.0	0.00034	20.7	0.0	1.9	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.6	gi|289595922|ref|YP_003482618.1|	-	0.00024	21.4	0.0	0.0017	18.7	0.0	2.2	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Glycos_transf_1	PF00534.20	gi|289595923|ref|YP_003482619.1|	-	9.7e-36	122.9	0.1	2.5e-35	121.5	0.0	1.7	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|289595923|ref|YP_003482619.1|	-	2.5e-27	95.9	0.0	5.4e-27	94.8	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|289595923|ref|YP_003482619.1|	-	3.2e-21	76.1	0.9	1.4e-19	70.7	0.1	2.2	1	1	1	2	2	2	1	Glycosyltransferase	Family	4
Glyco_trans_4_4	PF13579.6	gi|289595923|ref|YP_003482619.1|	-	2.1e-12	47.8	0.0	3e-12	47.3	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_1_2	PF13524.6	gi|289595923|ref|YP_003482619.1|	-	1.9e-06	28.2	0.0	4.2e-06	27.1	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_2	PF13477.6	gi|289595923|ref|YP_003482619.1|	-	0.014	15.4	1.2	0.06	13.4	0.2	2.2	1	1	0	2	2	2	0	Glycosyl	transferase	4-like
MobA_MobL	PF03389.15	gi|289595923|ref|YP_003482619.1|	-	0.034	13.9	0.1	0.057	13.1	0.1	1.2	1	0	0	1	1	1	0	MobA/MobL	family
Sulfotransfer_3	PF13469.6	gi|289595924|ref|YP_003482620.1|	-	1.5e-24	87.6	0.0	2.8e-24	86.7	0.0	1.4	1	1	0	1	1	1	1	Sulfotransferase	family
Sulfotransfer_1	PF00685.27	gi|289595924|ref|YP_003482620.1|	-	3.4e-18	66.1	1.5	1.5e-17	64.0	1.5	1.9	1	1	0	1	1	1	1	Sulfotransferase	domain
Sulfotransfer_4	PF17784.1	gi|289595924|ref|YP_003482620.1|	-	7.2e-05	22.7	0.1	0.001	19.0	0.1	2.6	1	1	0	1	1	1	1	Sulfotransferase	domain
DDE_Tnp_1	PF01609.21	gi|289595925|ref|YP_003482621.1|	-	2.7e-17	63.1	0.6	4e-17	62.6	0.1	1.6	2	0	0	2	2	2	1	Transposase	DDE	domain
DUF772	PF05598.11	gi|289595925|ref|YP_003482621.1|	-	0.025	14.6	0.3	0.055	13.5	0.3	1.6	1	0	0	1	1	1	0	Transposase	domain	(DUF772)
DDE_Tnp_1_3	PF13612.6	gi|289595925|ref|YP_003482621.1|	-	0.026	14.5	0.0	0.044	13.8	0.0	1.4	1	0	0	1	1	1	0	Transposase	DDE	domain
EphA2_TM	PF14575.6	gi|289595926|ref|YP_003482622.1|	-	0.57	11.1	0.1	0.57	11.1	0.1	4.8	5	1	0	5	5	5	0	Ephrin	type-A	receptor	2	transmembrane	domain
Glycos_transf_1	PF00534.20	gi|289595927|ref|YP_003482623.1|	-	1.2e-39	135.7	0.3	1.2e-39	135.7	0.3	1.9	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|289595927|ref|YP_003482623.1|	-	1.6e-22	80.4	0.0	6.7e-22	78.4	0.0	2.0	3	0	0	3	3	3	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|289595927|ref|YP_003482623.1|	-	5.5e-14	52.5	0.0	4.7e-12	46.2	0.0	2.6	2	1	1	3	3	3	1	Glycosyltransferase	Family	4
Glyco_trans_4_2	PF13477.6	gi|289595927|ref|YP_003482623.1|	-	7.2e-09	35.8	1.1	7.2e-09	35.8	1.1	2.0	2	0	0	2	2	2	1	Glycosyl	transferase	4-like
Glyco_trans_1_2	PF13524.6	gi|289595927|ref|YP_003482623.1|	-	1.6e-07	31.6	0.0	3.6e-07	30.5	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.6	gi|289595927|ref|YP_003482623.1|	-	8.1e-06	26.4	0.0	1.1e-05	26.0	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glycos_transf_2	PF00535.26	gi|289595928|ref|YP_003482624.1|	-	2.3e-21	76.3	0.2	4.8e-10	39.5	0.0	2.3	2	0	0	2	2	2	2	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|289595928|ref|YP_003482624.1|	-	9.2e-10	38.8	0.0	0.00012	22.1	0.0	2.2	2	0	0	2	2	2	2	Glycosyltransferase	like	family	2
Glyco_transf_21	PF13506.6	gi|289595928|ref|YP_003482624.1|	-	0.00073	19.1	0.0	0.0011	18.5	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_trans_2_3	PF13632.6	gi|289595928|ref|YP_003482624.1|	-	0.0019	18.1	0.0	0.0028	17.6	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_tranf_2_5	PF13712.6	gi|289595928|ref|YP_003482624.1|	-	0.024	14.4	1.4	0.047	13.4	1.1	1.6	2	0	0	2	2	2	0	Glycosyltransferase	like	family
Glycos_transf_1	PF00534.20	gi|289595929|ref|YP_003482625.1|	-	2.7e-21	75.9	0.0	1.5e-20	73.4	0.0	2.3	1	1	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|289595929|ref|YP_003482625.1|	-	2.6e-17	63.5	0.0	5e-17	62.6	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.6	gi|289595929|ref|YP_003482625.1|	-	7.2e-10	39.1	0.0	1.2e-09	38.4	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|289595929|ref|YP_003482625.1|	-	4.6e-06	26.7	0.0	0.00015	21.8	0.0	3.1	3	1	0	3	3	3	1	Glycosyltransferase	Family	4
PP_kinase	PF02503.17	gi|289595929|ref|YP_003482625.1|	-	0.031	13.8	0.1	0.065	12.8	0.1	1.4	1	0	0	1	1	1	0	Polyphosphate	kinase	middle	domain
Bac_A_amyl_C	PF18612.1	gi|289595929|ref|YP_003482625.1|	-	0.055	13.2	0.0	0.15	11.9	0.0	1.6	1	0	0	1	1	1	0	Bacterial	Alpha	amylase	C-terminal	domain
PS_pyruv_trans	PF04230.13	gi|289595930|ref|YP_003482626.1|	-	2.1e-36	126.3	9.9	2.1e-36	126.3	9.9	1.6	2	0	0	2	2	2	1	Polysaccharide	pyruvyl	transferase
CH	PF00307.31	gi|289595930|ref|YP_003482626.1|	-	4.1	7.6	5.5	11	6.3	0.4	3.1	3	1	0	3	3	3	0	Calponin	homology	(CH)	domain
Polysacc_synt	PF01943.17	gi|289595931|ref|YP_003482627.1|	-	2.4e-39	135.4	37.3	2.4e-39	135.4	37.3	2.0	1	1	1	2	2	2	2	Polysaccharide	biosynthesis	protein
Polysacc_synt_C	PF14667.6	gi|289595931|ref|YP_003482627.1|	-	4.1e-13	49.6	9.6	4.1e-13	49.6	9.6	5.1	2	1	3	5	5	5	1	Polysaccharide	biosynthesis	C-terminal	domain
Polysacc_synt_3	PF13440.6	gi|289595931|ref|YP_003482627.1|	-	9.8e-11	41.4	23.7	9.8e-11	41.4	23.7	1.8	2	0	0	2	2	2	1	Polysaccharide	biosynthesis	protein
MatE	PF01554.18	gi|289595931|ref|YP_003482627.1|	-	6.4e-10	38.9	16.7	6.4e-10	38.9	16.7	3.1	2	1	1	3	3	3	1	MatE
RmlD_sub_bind	PF04321.17	gi|289595932|ref|YP_003482628.1|	-	2e-82	276.5	0.0	2.2e-82	276.4	0.0	1.0	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Epimerase	PF01370.21	gi|289595932|ref|YP_003482628.1|	-	6.6e-23	81.4	0.1	9.7e-23	80.9	0.1	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
GDP_Man_Dehyd	PF16363.5	gi|289595932|ref|YP_003482628.1|	-	2e-17	63.6	0.3	4.2e-17	62.6	0.1	1.6	1	1	1	2	2	2	1	GDP-mannose	4,6	dehydratase
Polysacc_synt_2	PF02719.15	gi|289595932|ref|YP_003482628.1|	-	2.7e-09	36.6	3.3	6.4e-09	35.4	1.4	2.3	1	1	1	2	2	2	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.12	gi|289595932|ref|YP_003482628.1|	-	1.1e-07	31.3	0.0	3.2e-07	29.8	0.0	1.8	2	0	0	2	2	2	1	Male	sterility	protein
Semialdhyde_dh	PF01118.24	gi|289595932|ref|YP_003482628.1|	-	0.17	12.3	0.8	0.63	10.5	0.2	2.4	2	2	1	3	3	3	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
dTDP_sugar_isom	PF00908.17	gi|289595933|ref|YP_003482629.1|	-	6.9e-77	256.9	0.0	7.8e-77	256.7	0.0	1.0	1	0	0	1	1	1	1	dTDP-4-dehydrorhamnose	3,5-epimerase
GDP_Man_Dehyd	PF16363.5	gi|289595934|ref|YP_003482630.1|	-	4.3e-89	299.2	0.0	5.1e-89	298.9	0.0	1.0	1	0	0	1	1	1	1	GDP-mannose	4,6	dehydratase
Epimerase	PF01370.21	gi|289595934|ref|YP_003482630.1|	-	2.8e-69	233.2	0.0	3.5e-69	232.9	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
3Beta_HSD	PF01073.19	gi|289595934|ref|YP_003482630.1|	-	1e-21	77.2	0.1	1.5e-21	76.6	0.1	1.2	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
RmlD_sub_bind	PF04321.17	gi|289595934|ref|YP_003482630.1|	-	4.6e-20	71.9	0.0	6.2e-20	71.5	0.0	1.3	1	1	0	1	1	1	1	RmlD	substrate	binding	domain
Polysacc_synt_2	PF02719.15	gi|289595934|ref|YP_003482630.1|	-	1.9e-18	66.6	0.0	7.7e-18	64.6	0.0	1.9	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.12	gi|289595934|ref|YP_003482630.1|	-	2e-15	56.7	0.1	1.2e-13	50.8	0.1	2.5	1	1	0	1	1	1	1	Male	sterility	protein
NAD_binding_10	PF13460.6	gi|289595934|ref|YP_003482630.1|	-	1.1e-07	31.9	0.0	1.8e-07	31.3	0.0	1.3	1	0	0	1	1	1	1	NAD(P)H-binding
adh_short	PF00106.25	gi|289595934|ref|YP_003482630.1|	-	1.6e-05	24.5	0.0	0.00016	21.2	0.0	2.3	2	1	0	2	2	2	1	short	chain	dehydrogenase
DOT1	PF08123.13	gi|289595934|ref|YP_003482630.1|	-	0.044	13.3	0.1	0.41	10.1	0.0	2.2	2	0	0	2	2	2	0	Histone	methylation	protein	DOT1
NmrA	PF05368.13	gi|289595934|ref|YP_003482630.1|	-	0.05	13.2	0.0	0.11	12.0	0.0	1.6	1	0	0	1	1	1	0	NmrA-like	family
Sacchrp_dh_NADP	PF03435.18	gi|289595934|ref|YP_003482630.1|	-	0.057	13.7	0.0	0.13	12.6	0.0	1.6	1	0	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
KR	PF08659.10	gi|289595934|ref|YP_003482630.1|	-	0.076	12.9	0.0	0.15	11.9	0.0	1.6	1	1	0	1	1	1	0	KR	domain
Ldh_1_N	PF00056.23	gi|289595934|ref|YP_003482630.1|	-	0.17	11.9	0.0	0.33	11.0	0.0	1.5	1	0	0	1	1	1	0	lactate/malate	dehydrogenase,	NAD	binding	domain
NTP_transferase	PF00483.23	gi|289595935|ref|YP_003482631.1|	-	3.6e-61	206.9	0.0	4.4e-61	206.6	0.0	1.0	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.7	gi|289595935|ref|YP_003482631.1|	-	7.2e-07	29.7	0.0	9.3e-07	29.3	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Exosortase_EpsH	PF09721.10	gi|289595936|ref|YP_003482632.1|	-	2.4e-18	66.6	29.9	3e-18	66.3	29.9	1.1	1	0	0	1	1	1	1	Transmembrane	exosortase	(Exosortase_EpsH)
DUF1664	PF07889.12	gi|289595938|ref|YP_003482634.1|	-	0.00014	21.9	1.0	0.24	11.4	0.0	2.2	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF1664)
HMMR_C	PF15908.5	gi|289595938|ref|YP_003482634.1|	-	0.0008	19.7	4.9	0.0063	16.8	1.5	2.1	2	0	0	2	2	2	1	Hyaluronan	mediated	motility	receptor	C-terminal
Uso1_p115_C	PF04871.13	gi|289595938|ref|YP_003482634.1|	-	0.0021	18.4	2.1	0.055	13.8	1.2	2.2	2	0	0	2	2	2	1	Uso1	/	p115	like	vesicle	tethering	protein,	C	terminal	region
YabA	PF06156.13	gi|289595938|ref|YP_003482634.1|	-	0.0054	17.3	2.9	0.18	12.5	0.7	2.3	2	0	0	2	2	2	1	Initiation	control	protein	YabA
DivIC	PF04977.15	gi|289595938|ref|YP_003482634.1|	-	0.014	15.1	5.3	0.59	9.9	1.7	2.6	3	0	0	3	3	2	0	Septum	formation	initiator
HALZ	PF02183.18	gi|289595938|ref|YP_003482634.1|	-	0.017	15.3	1.6	0.017	15.3	1.6	2.5	3	0	0	3	3	2	0	Homeobox	associated	leucine	zipper
DUF1640	PF07798.11	gi|289595938|ref|YP_003482634.1|	-	0.042	13.9	1.8	0.9	9.6	1.6	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1640)
Ax_dynein_light	PF10211.9	gi|289595938|ref|YP_003482634.1|	-	0.049	13.6	7.0	1.2	9.0	4.1	2.1	2	0	0	2	2	2	0	Axonemal	dynein	light	chain
Spc24	PF08286.11	gi|289595938|ref|YP_003482634.1|	-	0.078	13.2	4.5	2.4	8.4	1.2	2.3	2	0	0	2	2	2	0	Spc24	subunit	of	Ndc80
FlxA	PF14282.6	gi|289595938|ref|YP_003482634.1|	-	0.08	12.9	3.5	3.1	7.9	0.8	2.2	2	0	0	2	2	2	0	FlxA-like	protein
DUF4140	PF13600.6	gi|289595938|ref|YP_003482634.1|	-	0.082	13.4	0.1	3.9	8.0	0.2	2.2	2	0	0	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
DUF4391	PF14335.6	gi|289595938|ref|YP_003482634.1|	-	0.084	12.6	2.8	0.16	11.6	1.1	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4391)
CENP-F_leu_zip	PF10473.9	gi|289595938|ref|YP_003482634.1|	-	0.09	12.8	9.5	2.7	8.0	6.4	2.2	2	0	0	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Lipoprotein_7	PF01540.16	gi|289595938|ref|YP_003482634.1|	-	0.097	11.9	2.9	0.25	10.6	0.3	2.0	2	0	0	2	2	2	0	Adhesin	lipoprotein
BLOC1_2	PF10046.9	gi|289595938|ref|YP_003482634.1|	-	0.14	12.5	7.3	2.8	8.3	1.9	2.4	2	0	0	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
CENP-H	PF05837.12	gi|289595938|ref|YP_003482634.1|	-	0.15	12.4	3.5	1.6	9.1	1.7	2.2	2	0	0	2	2	2	0	Centromere	protein	H	(CENP-H)
Mis12	PF05859.12	gi|289595938|ref|YP_003482634.1|	-	0.17	12.0	2.1	0.15	12.1	0.8	1.6	2	0	0	2	2	1	0	Mis12	protein
Swi5	PF07061.11	gi|289595938|ref|YP_003482634.1|	-	0.19	11.8	5.1	1.8	8.7	1.7	2.4	2	0	0	2	2	2	0	Swi5
Spc7	PF08317.11	gi|289595938|ref|YP_003482634.1|	-	0.19	10.5	5.2	0.45	9.3	2.0	2.0	2	0	0	2	2	2	0	Spc7	kinetochore	protein
DivIVA	PF05103.13	gi|289595938|ref|YP_003482634.1|	-	0.23	11.5	5.3	0.23	11.6	2.4	2.1	2	0	0	2	2	2	0	DivIVA	protein
Ribosomal_L29	PF00831.23	gi|289595938|ref|YP_003482634.1|	-	0.29	11.1	5.5	1.8	8.6	3.3	2.5	2	0	0	2	2	2	0	Ribosomal	L29	protein
DUF2730	PF10805.8	gi|289595938|ref|YP_003482634.1|	-	0.36	10.9	4.1	8.5	6.5	1.1	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2730)
ZapB	PF06005.12	gi|289595938|ref|YP_003482634.1|	-	0.42	11.1	9.7	0.93	10.0	4.5	2.3	2	0	0	2	2	2	0	Cell	division	protein	ZapB
Sec34	PF04136.15	gi|289595938|ref|YP_003482634.1|	-	0.48	10.3	4.3	11	5.9	0.1	2.3	2	0	0	2	2	2	0	Sec34-like	family
FlaC_arch	PF05377.11	gi|289595938|ref|YP_003482634.1|	-	0.48	10.8	7.8	8	6.9	0.4	2.7	2	1	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
Baculo_PEP_C	PF04513.12	gi|289595938|ref|YP_003482634.1|	-	0.51	10.4	5.0	6	6.9	0.1	2.2	2	0	0	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Cnn_1N	PF07989.11	gi|289595938|ref|YP_003482634.1|	-	0.69	10.1	12.3	0.41	10.8	3.7	2.5	2	1	1	3	3	3	0	Centrosomin	N-terminal	motif	1
bZIP_1	PF00170.21	gi|289595938|ref|YP_003482634.1|	-	0.88	9.7	12.4	0.45	10.7	3.7	2.7	3	0	0	3	3	2	0	bZIP	transcription	factor
Fungal_TACC	PF12709.7	gi|289595938|ref|YP_003482634.1|	-	0.94	10.0	8.6	0.54	10.7	3.9	2.3	2	0	0	2	2	2	0	Fungal	Transforming	acidic	coiled-coil	(TACC)	proteins
TSC22	PF01166.18	gi|289595938|ref|YP_003482634.1|	-	1.5	9.1	8.1	11	6.5	0.2	2.5	2	0	0	2	2	2	0	TSC-22/dip/bun	family
Fib_alpha	PF08702.10	gi|289595938|ref|YP_003482634.1|	-	3.3	7.9	8.8	7	6.8	1.8	2.9	3	0	0	3	3	3	0	Fibrinogen	alpha/beta	chain	family
GPS2_interact	PF15784.5	gi|289595938|ref|YP_003482634.1|	-	3.8	8.0	8.0	0.17	12.4	0.5	2.1	2	0	0	2	2	2	0	G-protein	pathway	suppressor	2-interacting	domain
Lzipper-MIP1	PF14389.6	gi|289595938|ref|YP_003482634.1|	-	4.5	7.6	14.9	0.44	10.9	3.7	3.1	2	1	1	3	3	3	0	Leucine-zipper	of	ternary	complex	factor	MIP1
EF-hand_6	PF13405.6	gi|289595939|ref|YP_003482635.1|	-	0.058	13.4	0.1	0.093	12.7	0.1	1.5	1	1	0	1	1	1	0	EF-hand	domain
EF-hand_1	PF00036.32	gi|289595939|ref|YP_003482635.1|	-	0.083	12.5	1.8	0.17	11.5	0.1	2.0	2	0	0	2	2	2	0	EF	hand
ParE_toxin	PF05016.15	gi|289595940|ref|YP_003482636.1|	-	0.0013	19.3	0.3	0.0018	18.9	0.3	1.1	1	0	0	1	1	1	1	ParE	toxin	of	type	II	toxin-antitoxin	system,	parDE
SPOR	PF05036.13	gi|289595940|ref|YP_003482636.1|	-	0.017	15.5	0.0	0.021	15.2	0.0	1.3	1	1	0	1	1	1	0	Sporulation	related	domain
DUF349	PF03993.12	gi|289595942|ref|YP_003482638.1|	-	0.011	16.0	0.2	0.014	15.7	0.2	1.2	1	0	0	1	1	1	0	Domain	of	Unknown	Function	(DUF349)
PIN	PF01850.21	gi|289595943|ref|YP_003482639.1|	-	2.4e-17	63.6	0.8	2.9e-17	63.3	0.8	1.1	1	0	0	1	1	1	1	PIN	domain
PIN_3	PF13470.6	gi|289595943|ref|YP_003482639.1|	-	0.0081	16.9	0.0	0.01	16.6	0.0	1.4	1	1	0	1	1	1	1	PIN	domain
PIN_12	PF16289.5	gi|289595943|ref|YP_003482639.1|	-	0.01	16.4	0.5	0.013	16.0	0.5	1.3	1	1	0	1	1	1	1	PIN	domain
HAD_2	PF13419.6	gi|289595945|ref|YP_003482641.1|	-	1e-23	84.4	0.5	1.2e-22	80.8	0.5	2.0	1	1	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.26	gi|289595945|ref|YP_003482641.1|	-	1.1e-13	52.0	1.7	1.1e-10	42.1	0.1	2.5	1	1	1	2	2	2	2	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.6	gi|289595945|ref|YP_003482641.1|	-	4.8e-09	36.1	0.0	1.2e-08	34.9	0.0	1.6	1	0	0	1	1	1	1	HAD-hyrolase-like
Hydrolase_3	PF08282.12	gi|289595945|ref|YP_003482641.1|	-	0.00048	19.9	1.3	0.046	13.4	0.0	2.9	2	1	1	3	3	3	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.7	gi|289595945|ref|YP_003482641.1|	-	0.0018	18.7	0.6	0.0067	16.8	0.6	1.9	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
PGP_phosphatase	PF09419.10	gi|289595945|ref|YP_003482641.1|	-	0.025	14.2	0.1	0.74	9.4	0.0	2.4	2	1	0	2	2	2	0	Mitochondrial	PGP	phosphatase
S6PP	PF05116.13	gi|289595945|ref|YP_003482641.1|	-	0.028	13.9	0.0	0.37	10.3	0.0	2.2	2	0	0	2	2	2	0	Sucrose-6F-phosphate	phosphohydrolase
Acid_phosphat_B	PF03767.14	gi|289595945|ref|YP_003482641.1|	-	0.039	13.5	0.5	0.14	11.7	0.5	1.8	1	1	0	1	1	1	0	HAD	superfamily,	subfamily	IIIB	(Acid	phosphatase)
DUF2608	PF11019.8	gi|289595945|ref|YP_003482641.1|	-	0.062	12.8	0.3	0.15	11.5	0.2	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2608)
RPAP1_N	PF08621.10	gi|289595945|ref|YP_003482641.1|	-	0.19	11.5	3.6	0.21	11.4	1.3	2.3	1	1	1	2	2	2	0	RPAP1-like,	N-terminal
DUF2120	PF09893.9	gi|289595946|ref|YP_003482642.1|	-	0.074	13.2	0.7	0.088	12.9	0.7	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2120)
CarbopepD_reg_2	PF13715.6	gi|289595946|ref|YP_003482642.1|	-	0.11	12.5	0.0	0.15	12.1	0.0	1.3	1	1	0	1	1	1	0	CarboxypepD_reg-like	domain
MetallophosN	PF16371.5	gi|289595946|ref|YP_003482642.1|	-	0.14	12.5	0.0	0.34	11.2	0.0	1.7	1	1	1	2	2	2	0	N	terminal	of	Calcineurin-like	phosphoesterase
UDG	PF03167.19	gi|289595947|ref|YP_003482643.1|	-	4.1e-37	127.5	0.0	5.4e-37	127.2	0.0	1.1	1	0	0	1	1	1	1	Uracil	DNA	glycosylase	superfamily
NosD	PF05048.13	gi|289595948|ref|YP_003482644.1|	-	1.1e-10	41.3	57.5	1.7e-05	24.2	11.3	4.3	3	1	1	4	4	4	4	Periplasmic	copper-binding	protein	(NosD)
Orf78	PF06024.12	gi|289595948|ref|YP_003482644.1|	-	0.083	13.2	1.6	0.59	10.5	0.1	2.6	2	0	0	2	2	2	0	Orf78	(ac78)
SSPI	PF14098.6	gi|289595948|ref|YP_003482644.1|	-	0.11	12.7	1.2	0.92	9.7	0.3	2.5	2	0	0	2	2	2	0	Small,	acid-soluble	spore	protein	I
PAP2	PF01569.21	gi|289595949|ref|YP_003482645.1|	-	5e-17	61.9	11.7	5e-17	61.9	11.7	1.7	1	1	1	2	2	2	2	PAP2	superfamily
PAP2_3	PF14378.6	gi|289595949|ref|YP_003482645.1|	-	6.9e-09	35.7	10.8	6.6e-08	32.5	10.8	1.9	1	1	0	1	1	1	1	PAP2	superfamily
Serinc	PF03348.15	gi|289595949|ref|YP_003482645.1|	-	0.032	13.2	0.9	0.056	12.4	0.9	1.4	1	0	0	1	1	1	0	Serine	incorporator	(Serinc)
DUF4229	PF14012.6	gi|289595949|ref|YP_003482645.1|	-	0.042	14.0	1.2	0.042	14.0	1.2	2.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF4229)
Ldr_toxin	PF13940.6	gi|289595949|ref|YP_003482645.1|	-	0.3	11.2	0.4	0.3	11.2	0.4	2.4	3	0	0	3	3	3	0	Toxin	Ldr,	type	I	toxin-antitoxin	system
Mg_trans_NIPA	PF05653.14	gi|289595949|ref|YP_003482645.1|	-	0.44	9.6	9.7	0.14	11.3	1.2	2.6	2	1	1	3	3	3	0	Magnesium	transporter	NIPA
PAP2_C	PF14360.6	gi|289595949|ref|YP_003482645.1|	-	2.6	8.7	11.1	0.44	11.1	2.1	2.5	2	0	0	2	2	2	0	PAP2	superfamily	C-terminal
MNHE	PF01899.16	gi|289595949|ref|YP_003482645.1|	-	2.8	7.7	7.5	1.8e+02	1.8	7.5	2.2	1	1	0	1	1	1	0	Na+/H+	ion	antiporter	subunit
DUF1761	PF08570.10	gi|289595949|ref|YP_003482645.1|	-	3.2	8.0	9.1	1.2	9.4	0.6	3.2	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1761)
DUF2628	PF10947.8	gi|289595949|ref|YP_003482645.1|	-	6.9	7.1	11.3	7.2	7.0	1.2	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2628)
Wzy_C	PF04932.15	gi|289595949|ref|YP_003482645.1|	-	7.3	6.2	14.6	0.42	10.2	2.6	2.2	2	0	0	2	2	2	0	O-Antigen	ligase
Methyltransf_21	PF05050.12	gi|289595950|ref|YP_003482646.1|	-	3.1e-07	30.6	0.0	1.1e-06	28.8	0.0	1.8	1	1	0	1	1	1	1	Methyltransferase	FkbM	domain
Methyltransf_23	PF13489.6	gi|289595950|ref|YP_003482646.1|	-	0.00014	21.7	0.0	0.00043	20.2	0.0	1.8	1	1	1	2	2	2	1	Methyltransferase	domain
Met_10	PF02475.16	gi|289595950|ref|YP_003482646.1|	-	0.015	15.0	0.0	0.019	14.7	0.0	1.2	1	0	0	1	1	1	0	Met-10+	like-protein
PrmA	PF06325.13	gi|289595950|ref|YP_003482646.1|	-	0.037	13.4	0.0	0.056	12.8	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
MTS	PF05175.14	gi|289595950|ref|YP_003482646.1|	-	0.13	11.8	0.0	0.2	11.2	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	small	domain
Glycos_transf_2	PF00535.26	gi|289595951|ref|YP_003482647.1|	-	2e-21	76.5	0.0	3e-21	76.0	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|289595951|ref|YP_003482647.1|	-	3.2e-09	37.0	0.0	4.4e-08	33.3	0.0	2.0	2	0	0	2	2	2	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|289595951|ref|YP_003482647.1|	-	0.00031	21.2	0.0	0.00095	19.6	0.0	1.8	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.9	gi|289595951|ref|YP_003482647.1|	-	0.0066	16.0	0.1	0.64	9.4	0.0	2.4	1	1	1	2	2	2	2	Glycosyltransferase	like	family	2
CAP59_mtransfer	PF11735.8	gi|289595951|ref|YP_003482647.1|	-	0.037	13.7	0.0	0.054	13.2	0.0	1.2	1	0	0	1	1	1	0	Cryptococcal	mannosyltransferase	1
Glycos_transf_1	PF00534.20	gi|289595952|ref|YP_003482648.1|	-	1.7e-20	73.2	0.5	1.7e-20	73.2	0.5	2.0	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|289595952|ref|YP_003482648.1|	-	1.6e-13	51.3	0.0	8.2e-13	48.9	0.0	2.2	2	1	2	4	4	4	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|289595952|ref|YP_003482648.1|	-	0.016	15.2	0.0	0.044	13.8	0.0	1.8	1	1	0	1	1	1	0	Glycosyltransferase	Family	4
Oxidored_nitro	PF00148.19	gi|289595952|ref|YP_003482648.1|	-	0.18	10.5	0.0	2	7.1	0.0	2.0	2	0	0	2	2	2	0	Nitrogenase	component	1	type	Oxidoreductase
Glycos_transf_1	PF00534.20	gi|289595953|ref|YP_003482649.1|	-	1e-36	126.0	0.2	1.5e-35	122.3	0.0	2.1	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|289595953|ref|YP_003482649.1|	-	1.1e-23	84.2	0.0	2.1e-23	83.2	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.6	gi|289595953|ref|YP_003482649.1|	-	6.8e-09	36.0	0.0	1.7e-08	34.8	0.0	1.6	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|289595953|ref|YP_003482649.1|	-	4.1e-06	26.9	0.0	9e-06	25.8	0.0	1.7	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_1_4	PF13692.6	gi|289595954|ref|YP_003482650.1|	-	9.2e-19	68.2	0.0	2.1e-18	67.1	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glycos_transf_1	PF00534.20	gi|289595954|ref|YP_003482650.1|	-	6.8e-17	61.5	0.0	1.3e-16	60.6	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|289595954|ref|YP_003482650.1|	-	0.021	14.8	0.0	0.037	14.0	0.0	1.5	1	0	0	1	1	1	0	Glycosyltransferase	Family	4
AA_permease_2	PF13520.6	gi|289595955|ref|YP_003482651.1|	-	2.9e-39	135.1	45.8	3.6e-39	134.8	45.8	1.0	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.21	gi|289595955|ref|YP_003482651.1|	-	1.5e-29	102.9	40.3	2.1e-29	102.5	39.5	1.5	1	1	0	1	1	1	1	Amino	acid	permease
Trp_Tyr_perm	PF03222.13	gi|289595955|ref|YP_003482651.1|	-	7.6e-06	25.2	19.5	7.6e-06	25.2	19.5	1.8	2	0	0	2	2	2	1	Tryptophan/tyrosine	permease	family
GDP_Man_Dehyd	PF16363.5	gi|289595956|ref|YP_003482652.1|	-	2.5e-53	181.7	0.1	3.8e-50	171.2	0.1	2.7	1	1	0	1	1	1	1	GDP-mannose	4,6	dehydratase
Epimerase	PF01370.21	gi|289595956|ref|YP_003482652.1|	-	2.8e-51	174.3	0.0	3.9e-51	173.9	0.0	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.17	gi|289595956|ref|YP_003482652.1|	-	1.4e-17	63.8	0.0	7.2e-17	61.4	0.0	1.8	1	1	0	1	1	1	1	RmlD	substrate	binding	domain
Polysacc_synt_2	PF02719.15	gi|289595956|ref|YP_003482652.1|	-	3.9e-17	62.3	0.7	1.2e-14	54.2	0.0	2.9	1	1	1	2	2	2	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.12	gi|289595956|ref|YP_003482652.1|	-	1.7e-13	50.4	0.0	3.5e-11	42.8	0.0	2.4	2	0	0	2	2	2	2	Male	sterility	protein
3Beta_HSD	PF01073.19	gi|289595956|ref|YP_003482652.1|	-	2.9e-13	49.5	0.0	1.5e-12	47.1	0.0	1.9	1	1	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
NAD_binding_10	PF13460.6	gi|289595956|ref|YP_003482652.1|	-	0.0018	18.2	0.0	0.0079	16.1	0.0	1.9	2	0	0	2	2	2	1	NAD(P)H-binding
KR	PF08659.10	gi|289595956|ref|YP_003482652.1|	-	0.023	14.6	0.0	0.44	10.4	0.0	2.3	2	0	0	2	2	2	0	KR	domain
NTP_transferase	PF00483.23	gi|289595957|ref|YP_003482653.1|	-	5.6e-34	117.8	0.0	7.3e-34	117.5	0.0	1.2	1	0	0	1	1	1	1	Nucleotidyl	transferase
Hexapep	PF00132.24	gi|289595957|ref|YP_003482653.1|	-	1.1e-19	69.3	22.4	5.9e-10	38.5	0.6	4.7	3	1	1	4	4	4	4	Bacterial	transferase	hexapeptide	(six	repeats)
NTP_transf_3	PF12804.7	gi|289595957|ref|YP_003482653.1|	-	2.1e-13	50.9	0.0	2.6e-13	50.7	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep_2	PF14602.6	gi|289595957|ref|YP_003482653.1|	-	8.7e-08	31.8	0.4	8.7e-08	31.8	0.4	5.1	5	1	0	5	5	5	2	Hexapeptide	repeat	of	succinyl-transferase
DUF4954	PF16314.5	gi|289595957|ref|YP_003482653.1|	-	2.4e-05	22.7	0.1	3.5e-05	22.2	0.1	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4954)
IspD	PF01128.19	gi|289595957|ref|YP_003482653.1|	-	0.00026	20.8	0.0	0.0004	20.2	0.0	1.3	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
CTP_transf_3	PF02348.19	gi|289595957|ref|YP_003482653.1|	-	0.03	14.3	0.1	0.053	13.4	0.1	1.3	1	0	0	1	1	1	0	Cytidylyltransferase
A_deaminase	PF00962.22	gi|289595958|ref|YP_003482654.1|	-	1.6e-72	244.6	0.0	1.8e-72	244.4	0.0	1.0	1	0	0	1	1	1	1	Adenosine/AMP	deaminase
Radical_SAM	PF04055.21	gi|289595958|ref|YP_003482654.1|	-	0.043	14.2	0.5	0.6	10.5	0.1	2.9	1	1	1	3	3	3	0	Radical	SAM	superfamily
IF2_N	PF04760.15	gi|289595958|ref|YP_003482654.1|	-	0.043	13.6	0.1	0.28	11.0	0.3	2.3	2	0	0	2	2	2	0	Translation	initiation	factor	IF-2,	N-terminal	region
DUF3791	PF12668.7	gi|289595958|ref|YP_003482654.1|	-	0.14	12.2	0.4	18	5.5	0.0	2.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3791)
Amidohydro_1	PF01979.20	gi|289595958|ref|YP_003482654.1|	-	0.15	11.3	0.0	0.49	9.7	0.0	1.8	1	1	0	1	1	1	0	Amidohydrolase	family
PGM_PMM_I	PF02878.16	gi|289595959|ref|YP_003482655.1|	-	4.1e-27	94.6	0.0	9e-27	93.5	0.0	1.6	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_II	PF02879.16	gi|289595959|ref|YP_003482655.1|	-	7.3e-23	81.2	0.0	1.5e-22	80.1	0.0	1.5	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_III	PF02880.16	gi|289595959|ref|YP_003482655.1|	-	1.6e-16	60.5	0.0	2.8e-16	59.7	0.0	1.4	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_IV	PF00408.20	gi|289595959|ref|YP_003482655.1|	-	1.5e-09	37.9	0.0	5.2e-09	36.2	0.0	1.9	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
DUF2250	PF10007.9	gi|289595960|ref|YP_003482656.1|	-	6e-29	100.0	3.3	8.3e-29	99.6	3.3	1.2	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF4423	PF14394.6	gi|289595960|ref|YP_003482656.1|	-	0.0043	16.8	0.1	0.0082	15.9	0.1	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
TrmB	PF01978.19	gi|289595960|ref|YP_003482656.1|	-	0.011	15.6	0.0	0.021	14.7	0.0	1.6	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_27	PF13463.6	gi|289595960|ref|YP_003482656.1|	-	0.013	16.0	0.0	0.02	15.4	0.0	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_9	PF08221.11	gi|289595960|ref|YP_003482656.1|	-	0.014	15.5	0.1	0.043	13.9	0.0	1.8	2	0	0	2	2	2	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
Peptidase_S64	PF08192.11	gi|289595960|ref|YP_003482656.1|	-	0.017	13.6	1.2	0.019	13.5	1.2	1.0	1	0	0	1	1	1	0	Peptidase	family	S64
Phage_rep_O	PF04492.13	gi|289595960|ref|YP_003482656.1|	-	0.027	15.0	0.2	7.7	7.2	0.0	2.3	2	0	0	2	2	2	0	Bacteriophage	replication	protein	O
MarR_2	PF12802.7	gi|289595960|ref|YP_003482656.1|	-	0.066	13.1	0.0	0.097	12.6	0.0	1.3	1	0	0	1	1	1	0	MarR	family
UvsY	PF11056.8	gi|289595960|ref|YP_003482656.1|	-	0.43	10.9	3.9	9.1	6.6	0.1	2.8	2	1	0	3	3	3	0	Recombination,	repair	and	ssDNA	binding	protein	UvsY
SIS	PF01380.22	gi|289595961|ref|YP_003482657.1|	-	1.3e-55	186.8	0.8	1.9e-30	105.4	0.2	2.8	3	0	0	3	3	3	2	SIS	domain
GATase_6	PF13522.6	gi|289595961|ref|YP_003482657.1|	-	2.9e-24	85.8	0.0	5.6e-24	84.9	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_7	PF13537.6	gi|289595961|ref|YP_003482657.1|	-	2e-19	69.7	0.0	3.5e-19	68.9	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_4	PF13230.6	gi|289595961|ref|YP_003482657.1|	-	0.0045	15.9	0.0	0.007	15.3	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
Kdo_hydroxy	PF11004.8	gi|289595961|ref|YP_003482657.1|	-	0.093	12.0	0.0	0.16	11.2	0.0	1.3	1	0	0	1	1	1	0	3-deoxy-D-manno-oct-2-ulosonic	acid	(Kdo)	hydroxylase
FtsA	PF14450.6	gi|289595961|ref|YP_003482657.1|	-	0.12	12.8	0.7	5.4	7.5	0.2	3.1	2	1	0	2	2	2	0	Cell	division	protein	FtsA
PLU-1	PF08429.11	gi|289595961|ref|YP_003482657.1|	-	0.18	10.9	0.0	0.63	9.1	0.0	1.7	2	0	0	2	2	2	0	PLU-1-like	protein
Hexapep	PF00132.24	gi|289595962|ref|YP_003482658.1|	-	6e-22	76.5	26.6	4.2e-09	35.8	4.5	5.3	3	1	1	5	5	5	4	Bacterial	transferase	hexapeptide	(six	repeats)
NTP_transferase	PF00483.23	gi|289595962|ref|YP_003482658.1|	-	3.7e-21	75.8	0.0	4.8e-21	75.5	0.0	1.2	1	0	0	1	1	1	1	Nucleotidyl	transferase
Hexapep_2	PF14602.6	gi|289595962|ref|YP_003482658.1|	-	1.3e-13	50.4	38.9	1.6e-07	30.9	6.2	5.3	4	1	3	7	7	7	5	Hexapeptide	repeat	of	succinyl-transferase
NTP_transf_3	PF12804.7	gi|289595962|ref|YP_003482658.1|	-	8.6e-10	39.2	0.0	1.2e-09	38.7	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
DUF4954	PF16314.5	gi|289595962|ref|YP_003482658.1|	-	0.00017	19.9	0.4	0.00035	18.9	0.4	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4954)
IspD	PF01128.19	gi|289595962|ref|YP_003482658.1|	-	0.0015	18.3	0.1	0.0039	16.9	0.0	1.7	2	0	0	2	2	2	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
Fucokinase	PF07959.12	gi|289595962|ref|YP_003482658.1|	-	0.008	15.2	0.5	0.34	9.8	0.5	2.4	1	1	0	1	1	1	1	L-fucokinase
TauE	PF01925.19	gi|289595963|ref|YP_003482659.1|	-	1.9e-49	168.5	32.7	2.2e-49	168.2	32.7	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
Acetyltransf_3	PF13302.7	gi|289595964|ref|YP_003482660.1|	-	3e-18	66.8	0.1	3.9e-18	66.4	0.1	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.7	gi|289595964|ref|YP_003482660.1|	-	4.5e-08	33.4	0.5	6e-08	33.0	0.5	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.25	gi|289595964|ref|YP_003482660.1|	-	9.7e-07	29.0	0.1	1.4e-06	28.5	0.1	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.7	gi|289595964|ref|YP_003482660.1|	-	0.046	14.2	0.0	0.082	13.4	0.0	1.4	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.6	gi|289595964|ref|YP_003482660.1|	-	0.049	13.3	0.0	0.33	10.6	0.0	2.0	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
TrbM	PF07424.11	gi|289595964|ref|YP_003482660.1|	-	0.15	12.0	0.3	1.4	8.9	0.0	2.0	1	1	1	2	2	2	0	TrbM
MobB	PF03205.14	gi|289595965|ref|YP_003482661.1|	-	2.5e-23	82.4	0.0	3.7e-23	81.9	0.0	1.3	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
FeS	PF04060.13	gi|289595965|ref|YP_003482661.1|	-	2e-08	33.7	0.6	2e-08	33.7	0.6	2.6	3	0	0	3	3	3	1	Putative	Fe-S	cluster
cobW	PF02492.19	gi|289595965|ref|YP_003482661.1|	-	0.0074	15.9	0.0	0.012	15.2	0.0	1.4	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_18	PF13238.6	gi|289595965|ref|YP_003482661.1|	-	0.086	13.4	0.0	0.2	12.2	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
MMR_HSR1	PF01926.23	gi|289595965|ref|YP_003482661.1|	-	0.09	12.9	0.0	0.15	12.1	0.0	1.5	1	0	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_26	PF13500.6	gi|289595965|ref|YP_003482661.1|	-	0.11	12.3	0.0	1.6	8.5	0.0	2.2	1	1	0	1	1	1	0	AAA	domain
MoeA_N	PF03453.17	gi|289595966|ref|YP_003482662.1|	-	5.5e-46	156.2	1.0	6.3e-45	152.7	0.3	2.6	3	0	0	3	3	3	1	MoeA	N-terminal	region	(domain	I	and	II)
MoCF_biosynth	PF00994.24	gi|289595966|ref|YP_003482662.1|	-	1.2e-21	76.9	0.0	2.1e-21	76.1	0.0	1.4	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
MoeA_C	PF03454.15	gi|289595966|ref|YP_003482662.1|	-	1.3e-14	54.1	0.6	1e-13	51.3	0.0	2.8	3	0	0	3	3	3	1	MoeA	C-terminal	region	(domain	IV)
MFS_1	PF07690.16	gi|289595968|ref|YP_003482664.1|	-	1.6e-48	165.5	52.2	3.7e-28	98.5	32.9	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_1_like	PF12832.7	gi|289595968|ref|YP_003482664.1|	-	2.8e-20	72.5	28.3	4.6e-20	71.8	28.3	1.3	1	1	0	1	1	1	1	MFS_1	like	family
Sugar_tr	PF00083.24	gi|289595968|ref|YP_003482664.1|	-	1.2e-11	44.1	34.5	4.3e-06	25.9	14.5	2.4	2	1	0	2	2	2	2	Sugar	(and	other)	transporter
Nuc_H_symport	PF03825.16	gi|289595968|ref|YP_003482664.1|	-	7.9e-05	21.8	25.0	0.00031	19.9	25.0	1.9	1	1	0	1	1	1	1	Nucleoside	H+	symporter
MFS_3	PF05977.13	gi|289595968|ref|YP_003482664.1|	-	0.0088	14.5	7.9	0.18	10.2	0.2	2.3	1	1	0	2	2	2	2	Transmembrane	secretion	effector
Pam17	PF08566.10	gi|289595968|ref|YP_003482664.1|	-	0.67	9.8	3.3	1.3	8.8	0.2	2.5	3	0	0	3	3	3	0	Mitochondrial	import	protein	Pam17
HD	PF01966.22	gi|289595969|ref|YP_003482665.1|	-	2.8e-07	30.8	2.8	2.8e-07	30.8	2.8	1.6	2	0	0	2	2	2	1	HD	domain
Nitro_FeMo-Co	PF02579.17	gi|289595970|ref|YP_003482666.1|	-	0.001	19.3	0.0	0.0014	18.9	0.0	1.1	1	0	0	1	1	1	1	Dinitrogenase	iron-molybdenum	cofactor
Cucumopine_C	PF18631.1	gi|289595970|ref|YP_003482666.1|	-	0.056	13.4	0.0	0.094	12.7	0.0	1.3	1	0	0	1	1	1	0	Cucumopine	synthase	C-terminal	helical	bundle	domain
FKBP26_C	PF18046.1	gi|289595971|ref|YP_003482667.1|	-	2.7e-10	40.2	3.5	2.7e-10	40.2	3.5	1.8	2	0	0	2	2	2	1	FKBP26_C-terminal
FKBP_C	PF00254.28	gi|289595971|ref|YP_003482667.1|	-	3e-09	37.1	0.1	1e-08	35.4	0.0	2.1	1	1	0	1	1	1	1	FKBP-type	peptidyl-prolyl	cis-trans	isomerase
DHNA	PF04038.12	gi|289595972|ref|YP_003482668.1|	-	2.4e-43	147.0	0.0	2.8e-43	146.8	0.0	1.0	1	0	0	1	1	1	1	Dihydroneopterin	aldolase
NTPase_1	PF03266.15	gi|289595973|ref|YP_003482669.1|	-	5.6e-54	182.5	2.9	6.4e-54	182.4	2.9	1.0	1	0	0	1	1	1	1	NTPase
DUF2478	PF10649.9	gi|289595973|ref|YP_003482669.1|	-	7.1e-06	25.7	0.0	9.3e-06	25.3	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2478)
AAA_30	PF13604.6	gi|289595973|ref|YP_003482669.1|	-	0.00023	20.9	2.1	0.00074	19.3	1.9	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|289595973|ref|YP_003482669.1|	-	0.00039	20.7	0.3	0.00094	19.5	0.3	1.7	1	1	0	1	1	1	1	AAA	domain
KdpD	PF02702.17	gi|289595973|ref|YP_003482669.1|	-	0.0014	18.2	4.2	0.0076	15.8	4.2	1.8	1	1	0	1	1	1	1	Osmosensitive	K+	channel	His	kinase	sensor	domain
MeaB	PF03308.16	gi|289595973|ref|YP_003482669.1|	-	0.004	16.2	3.1	0.0053	15.8	0.3	2.1	1	1	0	2	2	2	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
SRP54	PF00448.22	gi|289595973|ref|YP_003482669.1|	-	0.0049	16.5	3.7	0.11	12.1	3.7	2.5	1	1	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
AAA_19	PF13245.6	gi|289595973|ref|YP_003482669.1|	-	0.0083	16.5	4.1	0.21	11.9	3.7	2.3	1	1	0	1	1	1	1	AAA	domain
AAA_24	PF13479.6	gi|289595973|ref|YP_003482669.1|	-	0.0088	15.8	7.6	1	9.0	0.2	2.8	1	1	1	2	2	2	2	AAA	domain
AAA_18	PF13238.6	gi|289595973|ref|YP_003482669.1|	-	0.011	16.3	2.6	0.027	15.0	2.6	1.8	1	1	0	1	1	1	0	AAA	domain
AAA_16	PF13191.6	gi|289595973|ref|YP_003482669.1|	-	0.034	14.5	0.1	0.11	12.8	0.1	1.9	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_5	PF07728.14	gi|289595973|ref|YP_003482669.1|	-	0.043	13.8	1.9	1	9.4	0.2	2.4	2	1	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
MobB	PF03205.14	gi|289595973|ref|YP_003482669.1|	-	0.051	13.5	0.1	0.051	13.5	0.1	2.0	2	1	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
DUF3388	PF11868.8	gi|289595973|ref|YP_003482669.1|	-	0.052	12.9	5.3	0.86	8.9	0.7	2.8	2	2	1	3	3	3	0	Protein	of	unknown	function	(DUF3388)
DUF2194	PF09960.9	gi|289595973|ref|YP_003482669.1|	-	0.053	11.9	1.3	0.064	11.6	1.3	1.0	1	0	0	1	1	1	0	Uncharacterised	protein	conserved	in	bacteria	(DUF2194)
AAA_17	PF13207.6	gi|289595973|ref|YP_003482669.1|	-	0.056	13.9	5.7	0.27	11.7	5.7	1.9	1	1	0	1	1	1	0	AAA	domain
Bac_DnaA	PF00308.18	gi|289595973|ref|YP_003482669.1|	-	0.079	12.8	1.6	0.13	12.1	1.6	1.3	1	0	0	1	1	1	0	Bacterial	dnaA	protein
cobW	PF02492.19	gi|289595973|ref|YP_003482669.1|	-	0.15	11.6	2.5	0.77	9.3	0.3	2.1	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_28	PF13521.6	gi|289595973|ref|YP_003482669.1|	-	0.16	12.2	0.1	0.28	11.4	0.1	1.5	1	1	0	1	1	1	0	AAA	domain
AAA_11	PF13086.6	gi|289595973|ref|YP_003482669.1|	-	0.26	11.1	2.0	6.6	6.4	0.0	2.5	2	1	0	2	2	2	0	AAA	domain
AAA	PF00004.29	gi|289595973|ref|YP_003482669.1|	-	0.28	11.6	8.0	1.7	9.1	8.0	2.0	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
TRM	PF02005.16	gi|289595974|ref|YP_003482670.1|	-	4.2e-75	253.3	0.0	5.3e-58	197.0	0.0	2.0	1	1	1	2	2	2	2	N2,N2-dimethylguanosine	tRNA	methyltransferase
MTS	PF05175.14	gi|289595974|ref|YP_003482670.1|	-	2.5e-06	27.1	0.0	4e-06	26.5	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_16	PF10294.9	gi|289595974|ref|YP_003482670.1|	-	0.0057	16.4	0.0	0.01	15.6	0.0	1.3	1	0	0	1	1	1	1	Lysine	methyltransferase
Cons_hypoth95	PF03602.15	gi|289595974|ref|YP_003482670.1|	-	0.052	13.2	0.0	0.082	12.5	0.0	1.3	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
Fe_dep_repress	PF01325.19	gi|289595974|ref|YP_003482670.1|	-	0.063	13.5	0.0	0.12	12.5	0.0	1.5	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
GcnA_N	PF18229.1	gi|289595974|ref|YP_003482670.1|	-	0.063	13.3	0.0	0.13	12.3	0.0	1.5	1	0	0	1	1	1	0	N-acetyl-beta-D-glucosaminidase	N-terminal	domain
Met_10	PF02475.16	gi|289595974|ref|YP_003482670.1|	-	0.07	12.9	0.1	0.089	12.5	0.1	1.2	1	0	0	1	1	1	0	Met-10+	like-protein
PrmA	PF06325.13	gi|289595974|ref|YP_003482670.1|	-	0.098	12.0	0.3	0.15	11.4	0.3	1.2	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_25	PF13649.6	gi|289595974|ref|YP_003482670.1|	-	0.13	13.0	0.0	0.24	12.1	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
POR	PF01558.18	gi|289595975|ref|YP_003482671.1|	-	4e-37	128.0	0.1	4.7e-37	127.8	0.1	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
Fer4	PF00037.27	gi|289595976|ref|YP_003482672.1|	-	9.3e-15	53.8	16.0	4.3e-08	32.7	4.9	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|289595976|ref|YP_003482672.1|	-	2e-09	38.2	7.0	6.5e-05	23.8	0.8	2.2	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_10	PF13237.6	gi|289595976|ref|YP_003482672.1|	-	3.9e-09	36.5	20.0	6.5e-07	29.4	10.7	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|289595976|ref|YP_003482672.1|	-	4.7e-09	35.9	14.2	7.4e-06	25.8	3.1	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|289595976|ref|YP_003482672.1|	-	5.7e-09	36.4	8.8	8.9e-09	35.8	8.8	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|289595976|ref|YP_003482672.1|	-	6.7e-09	35.8	8.0	1.2e-08	34.9	8.0	1.4	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|289595976|ref|YP_003482672.1|	-	2.1e-08	34.2	4.9	0.0012	19.0	0.7	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|289595976|ref|YP_003482672.1|	-	9.2e-08	31.7	11.6	0.00012	22.0	2.7	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|289595976|ref|YP_003482672.1|	-	0.00011	22.5	7.3	0.00019	21.8	7.4	1.4	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|289595976|ref|YP_003482672.1|	-	0.0005	20.6	9.5	0.01	16.3	1.1	2.5	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_17	PF13534.6	gi|289595976|ref|YP_003482672.1|	-	0.00075	20.0	9.4	0.0037	17.8	9.6	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|289595976|ref|YP_003482672.1|	-	0.0012	19.2	10.5	0.11	13.1	1.5	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_15	PF13459.6	gi|289595976|ref|YP_003482672.1|	-	0.0013	19.4	7.6	0.14	12.9	2.1	2.6	2	1	0	2	2	2	2	4Fe-4S	single	cluster	domain
ETF_QO	PF05187.13	gi|289595976|ref|YP_003482672.1|	-	0.05	13.7	5.0	0.31	11.2	0.5	2.1	1	1	1	2	2	2	0	Electron	transfer	flavoprotein-ubiquinone	oxidoreductase,	4Fe-4S
Fer4_22	PF17179.4	gi|289595976|ref|YP_003482672.1|	-	0.093	13.6	0.9	0.093	13.6	0.9	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
POR_N	PF01855.19	gi|289595977|ref|YP_003482673.1|	-	6.8e-67	225.6	0.9	9.5e-67	225.1	0.9	1.2	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
PFOR_II	PF17147.4	gi|289595977|ref|YP_003482673.1|	-	1.7e-29	102.1	0.2	3.8e-29	101.0	0.2	1.6	1	0	0	1	1	1	1	Pyruvate:ferredoxin	oxidoreductase	core	domain	II
Transketolase_C	PF02780.20	gi|289595977|ref|YP_003482673.1|	-	5e-07	29.6	0.1	1.2e-06	28.4	0.0	1.7	2	0	0	2	2	2	1	Transketolase,	C-terminal	domain
Cass2	PF14526.6	gi|289595977|ref|YP_003482673.1|	-	0.0036	17.5	0.2	0.0072	16.5	0.2	1.5	1	0	0	1	1	1	1	Integron-associated	effector	binding	protein
OxoGdeHyase_C	PF16870.5	gi|289595977|ref|YP_003482673.1|	-	0.053	13.2	0.0	0.12	12.1	0.0	1.5	1	0	0	1	1	1	0	2-oxoglutarate	dehydrogenase	C-terminal
MoCF_biosynth	PF00994.24	gi|289595977|ref|YP_003482673.1|	-	0.075	12.7	0.0	4.4	7.0	0.0	2.4	2	0	0	2	2	2	0	Probable	molybdopterin	binding	domain
TPP_enzyme_C	PF02775.21	gi|289595978|ref|YP_003482674.1|	-	8.4e-23	80.8	0.3	1.5e-22	80.0	0.1	1.5	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
DXP_synthase_N	PF13292.6	gi|289595978|ref|YP_003482674.1|	-	0.037	13.2	0.5	0.12	11.6	0.3	1.7	1	1	0	2	2	2	0	1-deoxy-D-xylulose-5-phosphate	synthase
DUF2064	PF09837.9	gi|289595978|ref|YP_003482674.1|	-	0.058	13.2	0.2	0.1	12.4	0.2	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2064)
eIF_4EBP	PF05456.11	gi|289595978|ref|YP_003482674.1|	-	0.074	13.0	0.0	0.16	11.9	0.0	1.6	1	0	0	1	1	1	0	Eukaryotic	translation	initiation	factor	4E	binding	protein	(EIF4EBP)
TPP_enzyme_C	PF02775.21	gi|289595979|ref|YP_003482675.1|	-	7.6e-30	103.7	0.1	6e-29	100.8	0.1	2.2	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
POR_N	PF01855.19	gi|289595979|ref|YP_003482675.1|	-	1.8e-13	50.8	0.0	2.6e-13	50.2	0.0	1.2	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Fer4	PF00037.27	gi|289595979|ref|YP_003482675.1|	-	5e-11	41.9	13.8	1.3e-07	31.1	4.7	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|289595979|ref|YP_003482675.1|	-	1.4e-07	31.2	12.9	0.00083	19.3	3.8	2.8	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|289595979|ref|YP_003482675.1|	-	1.3e-06	28.2	18.9	4.5e-06	26.5	3.6	2.8	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|289595979|ref|YP_003482675.1|	-	4.5e-06	27.1	9.4	2.4e-05	24.8	9.2	2.3	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|289595979|ref|YP_003482675.1|	-	5.2e-05	23.3	8.0	0.00011	22.2	8.0	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|289595979|ref|YP_003482675.1|	-	0.0003	20.9	8.4	0.001	19.2	8.4	1.9	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Transketolase_C	PF02780.20	gi|289595979|ref|YP_003482675.1|	-	0.00033	20.5	0.0	0.00094	19.1	0.0	1.8	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
PFOR_II	PF17147.4	gi|289595979|ref|YP_003482675.1|	-	0.0004	20.6	0.0	0.001	19.3	0.0	1.7	1	0	0	1	1	1	1	Pyruvate:ferredoxin	oxidoreductase	core	domain	II
Fer4_10	PF13237.6	gi|289595979|ref|YP_003482675.1|	-	0.00057	19.9	11.7	0.0064	16.6	1.8	2.5	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Transket_pyr	PF02779.24	gi|289595979|ref|YP_003482675.1|	-	0.00061	19.5	0.2	0.48	10.1	0.1	2.4	2	1	0	2	2	2	2	Transketolase,	pyrimidine	binding	domain
Fer4_16	PF13484.6	gi|289595979|ref|YP_003482675.1|	-	0.0037	18.2	9.6	0.0064	17.4	2.3	2.8	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Fer4_15	PF13459.6	gi|289595979|ref|YP_003482675.1|	-	0.024	15.3	8.2	0.13	13.0	0.9	2.7	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_8	PF13183.6	gi|289595979|ref|YP_003482675.1|	-	0.032	14.7	7.6	0.097	13.1	7.6	1.8	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|289595979|ref|YP_003482675.1|	-	0.071	13.7	8.9	1.7	9.3	1.7	2.6	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|289595979|ref|YP_003482675.1|	-	0.16	12.5	12.7	0.28	11.8	2.6	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_22	PF17179.4	gi|289595979|ref|YP_003482675.1|	-	4.5	8.2	8.0	6.5	7.7	1.3	2.7	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|289595979|ref|YP_003482675.1|	-	6.4	8.0	17.2	0.47	11.5	6.2	2.8	2	0	0	2	2	2	0	4Fe-4S	binding	domain
POR	PF01558.18	gi|289595980|ref|YP_003482676.1|	-	2.2e-40	138.6	0.2	2.6e-40	138.4	0.2	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
TMEM132D_C	PF15706.5	gi|289595981|ref|YP_003482677.1|	-	0.00071	19.3	2.2	0.0032	17.2	0.1	2.1	2	0	0	2	2	2	1	Mature	oligodendrocyte	transmembrane	protein,	TMEM132D,	C-term
Baculo_11_kDa	PF06143.11	gi|289595981|ref|YP_003482677.1|	-	0.029	14.0	3.3	0.44	10.2	0.1	2.3	2	0	0	2	2	2	0	Baculovirus	11	kDa	family
DUF3098	PF11297.8	gi|289595981|ref|YP_003482677.1|	-	0.054	13.1	2.5	8.7	6.0	1.3	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3098)
P_proprotein	PF01483.20	gi|289595981|ref|YP_003482677.1|	-	0.14	12.2	0.0	0.22	11.6	0.0	1.2	1	0	0	1	1	1	0	Proprotein	convertase	P-domain
EphA2_TM	PF14575.6	gi|289595981|ref|YP_003482677.1|	-	0.14	13.0	2.3	7.3	7.6	0.1	2.2	2	0	0	2	2	2	0	Ephrin	type-A	receptor	2	transmembrane	domain
DUF2275	PF10039.9	gi|289595981|ref|YP_003482677.1|	-	0.23	11.5	0.5	0.79	9.8	0.3	1.8	2	0	0	2	2	2	0	Predicted	integral	membrane	protein	(DUF2275)
SPC25	PF06703.11	gi|289595981|ref|YP_003482677.1|	-	0.23	11.2	2.9	12	5.6	1.0	2.4	2	1	0	2	2	2	0	Microsomal	signal	peptidase	25	kDa	subunit	(SPC25)
DUF4307	PF14155.6	gi|289595981|ref|YP_003482677.1|	-	0.34	10.8	1.5	1.6	8.6	0.2	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4307)
DUF202	PF02656.15	gi|289595981|ref|YP_003482677.1|	-	0.56	10.7	2.2	25	5.4	0.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF202)
SurA_N_3	PF13624.6	gi|289595981|ref|YP_003482677.1|	-	0.77	9.5	4.0	0.77	9.5	2.0	2.0	2	0	0	2	2	2	0	SurA	N-terminal	domain
DUF485	PF04341.12	gi|289595981|ref|YP_003482677.1|	-	0.95	9.5	4.3	5.8	6.9	0.5	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF485
AsmA	PF05170.14	gi|289595981|ref|YP_003482677.1|	-	1.3	7.7	7.8	0.15	10.9	1.3	2.0	2	0	0	2	2	2	0	AsmA	family
DUF2976	PF11190.8	gi|289595981|ref|YP_003482677.1|	-	2	8.3	6.4	3.6	7.5	0.1	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2976)
PDDEXK_1	PF12705.7	gi|289595982|ref|YP_003482678.1|	-	2.4e-13	50.6	0.0	4.9e-10	39.8	0.0	2.2	2	0	0	2	2	2	2	PD-(D/E)XK	nuclease	superfamily
Cas_Cas4	PF01930.17	gi|289595982|ref|YP_003482678.1|	-	8.4e-11	42.2	1.0	1.9e-08	34.6	0.2	2.2	2	0	0	2	2	2	2	Domain	of	unknown	function	DUF83
DUF3784	PF12650.7	gi|289595982|ref|YP_003482678.1|	-	0.91	9.8	9.4	0.38	11.0	2.7	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3784)
DUF2207	PF09972.9	gi|289595982|ref|YP_003482678.1|	-	1.9	7.1	9.4	58	2.3	9.4	2.1	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
Lactamase_B_3	PF13483.6	gi|289595983|ref|YP_003482679.1|	-	1.4e-30	106.3	0.0	1.7e-30	106.0	0.0	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.7	gi|289595983|ref|YP_003482679.1|	-	3.1e-20	72.5	0.0	4.8e-20	71.9	0.0	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|289595983|ref|YP_003482679.1|	-	6.2e-15	55.7	2.5	2.5e-14	53.8	2.3	2.0	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
DUF4788	PF16032.5	gi|289595983|ref|YP_003482679.1|	-	0.034	13.1	0.0	0.051	12.5	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4788)
Orexin	PF02072.15	gi|289595983|ref|YP_003482679.1|	-	0.16	11.9	0.0	0.24	11.4	0.0	1.2	1	0	0	1	1	1	0	Prepro-orexin
DUF3198	PF11433.8	gi|289595984|ref|YP_003482680.1|	-	7.1e-25	86.6	7.8	9.5e-25	86.2	7.8	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3198)
TraQ	PF09679.10	gi|289595984|ref|YP_003482680.1|	-	0.073	13.0	0.6	0.17	11.8	0.6	1.7	1	1	0	1	1	1	0	Type-F	conjugative	transfer	system	pilin	chaperone	(TraQ)
Peptidase_U4	PF03419.13	gi|289595984|ref|YP_003482680.1|	-	0.13	11.5	0.6	0.15	11.3	0.6	1.1	1	0	0	1	1	1	0	Sporulation	factor	SpoIIGA
PLDc_2	PF13091.6	gi|289595985|ref|YP_003482681.1|	-	1.6e-27	96.0	0.1	1.4e-13	50.9	0.0	2.4	2	0	0	2	2	2	2	PLD-like	domain
LTD	PF00932.19	gi|289595985|ref|YP_003482681.1|	-	2.3e-09	37.6	0.0	9.3e-09	35.6	0.0	2.1	1	0	0	1	1	1	1	Lamin	Tail	Domain
PLDc	PF00614.22	gi|289595985|ref|YP_003482681.1|	-	7.2e-06	26.0	0.8	0.027	14.6	0.1	2.7	2	0	0	2	2	2	2	Phospholipase	D	Active	site	motif
NigD_N	PF12667.7	gi|289595985|ref|YP_003482681.1|	-	0.18	11.9	1.0	0.57	10.3	0.1	2.3	2	0	0	2	2	2	0	NigD-like	N-terminal	OB	domain
Spermine_synth	PF01564.17	gi|289595986|ref|YP_003482682.1|	-	4.2e-63	212.2	0.0	7.4e-63	211.4	0.0	1.3	1	0	0	1	1	1	1	Spermine/spermidine	synthase	domain
Spermine_synt_N	PF17284.2	gi|289595986|ref|YP_003482682.1|	-	2.9e-14	52.7	0.6	7.3e-14	51.4	0.6	1.8	1	0	0	1	1	1	1	Spermidine	synthase	tetramerisation	domain
Methyltransf_25	PF13649.6	gi|289595986|ref|YP_003482682.1|	-	6.3e-05	23.6	0.0	0.0001	22.9	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|289595986|ref|YP_003482682.1|	-	0.00033	21.3	0.0	0.00086	20.0	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|289595986|ref|YP_003482682.1|	-	0.00081	19.2	0.0	0.0012	18.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.15	gi|289595986|ref|YP_003482682.1|	-	0.011	15.4	0.0	0.014	15.0	0.0	1.2	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
CarboxypepD_reg	PF13620.6	gi|289595987|ref|YP_003482683.1|	-	4e-35	119.9	30.8	8.8e-10	38.7	0.5	10.3	11	0	0	11	11	10	5	Carboxypeptidase	regulatory-like	domain
STT3	PF02516.14	gi|289595987|ref|YP_003482683.1|	-	6.5e-19	68.2	37.8	6.5e-19	68.2	37.8	2.1	2	1	0	2	2	2	1	Oligosaccharyl	transferase	STT3	subunit
PMT_2	PF13231.6	gi|289595987|ref|YP_003482683.1|	-	5.4e-12	46.2	9.5	5.4e-12	46.2	9.5	4.4	4	1	0	4	4	4	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
CarbopepD_reg_2	PF13715.6	gi|289595987|ref|YP_003482683.1|	-	4.4e-11	42.6	48.7	4e-06	26.7	1.9	10.6	9	2	2	11	11	11	5	CarboxypepD_reg-like	domain
DUF1416	PF07210.12	gi|289595987|ref|YP_003482683.1|	-	8.8e-08	31.9	0.1	0.16	11.8	0.0	4.8	4	1	1	5	5	5	3	Protein	of	unknown	function	(DUF1416)
FixG_C	PF11614.8	gi|289595987|ref|YP_003482683.1|	-	0.00059	20.0	3.6	0.028	14.6	0.1	3.7	2	1	1	3	3	3	1	IG-like	fold	at	C-terminal	of	FixG,	putative	oxidoreductase
DUF4198	PF10670.9	gi|289595987|ref|YP_003482683.1|	-	0.0035	17.7	0.2	1	9.7	0.0	3.9	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF4198)
Big_1	PF02369.16	gi|289595987|ref|YP_003482683.1|	-	0.016	15.2	11.0	0.4	10.7	0.9	5.0	6	0	0	6	6	6	0	Bacterial	Ig-like	domain	(group	1)
SdrD_B	PF17210.3	gi|289595987|ref|YP_003482683.1|	-	0.056	13.7	32.7	0.034	14.4	0.5	7.6	5	1	1	8	8	8	0	SdrD	B-like	domain
Tetraspanin	PF00335.20	gi|289595987|ref|YP_003482683.1|	-	0.073	12.8	1.5	0.25	11.0	1.5	1.9	1	0	0	1	1	1	0	Tetraspanin	family
DUF2012	PF09430.10	gi|289595987|ref|YP_003482683.1|	-	0.15	12.1	12.9	15	5.7	0.0	5.8	4	2	2	6	6	6	0	Protein	of	unknown	function	(DUF2012)
MG4	PF17789.1	gi|289595987|ref|YP_003482683.1|	-	1.7	8.8	5.5	4.6	7.5	0.0	3.7	4	0	0	4	4	4	0	Macroglobulin	domain	MG4
CARDB	PF07705.11	gi|289595988|ref|YP_003482684.1|	-	2.8e-09	37.2	0.6	5.7e-09	36.1	0.6	1.5	1	0	0	1	1	1	1	CARDB
CarboxypepD_reg	PF13620.6	gi|289595988|ref|YP_003482684.1|	-	0.054	13.8	0.2	0.22	11.8	0.0	2.1	3	0	0	3	3	3	0	Carboxypeptidase	regulatory-like	domain
Big_7	PF17957.1	gi|289595988|ref|YP_003482684.1|	-	0.71	10.7	6.2	0.25	12.1	1.4	2.7	3	1	0	3	3	3	0	Bacterial	Ig	domain
EcoR124_C	PF12008.8	gi|289595989|ref|YP_003482685.1|	-	0.03	14.0	1.7	0.04	13.6	1.7	1.3	1	1	0	1	1	1	0	Type	I	restriction	and	modification	enzyme	-	subunit	R	C	terminal
TA0956	PF11513.8	gi|289595989|ref|YP_003482685.1|	-	0.11	12.7	0.7	0.5	10.6	0.1	1.9	1	1	1	2	2	2	0	Thermoplasma	acidophilum	protein	TA0956
DUF460	PF04312.13	gi|289595990|ref|YP_003482686.1|	-	0.0072	16.0	0.0	0.016	14.9	0.0	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF460)
Peptidase_M50	PF02163.22	gi|289595991|ref|YP_003482687.1|	-	3.6e-24	85.4	2.0	7.1e-24	84.4	2.0	1.4	1	0	0	1	1	1	1	Peptidase	family	M50
PDZ_2	PF13180.6	gi|289595991|ref|YP_003482687.1|	-	5e-07	30.0	0.0	0.002	18.4	0.0	2.3	1	1	1	2	2	2	2	PDZ	domain
PDZ_1	PF12812.7	gi|289595991|ref|YP_003482687.1|	-	5.5e-06	26.3	0.1	0.011	15.8	0.0	2.4	2	0	0	2	2	2	2	PDZ-like	domain
PDZ_6	PF17820.1	gi|289595991|ref|YP_003482687.1|	-	6.9e-06	25.8	0.0	0.0021	17.9	0.0	2.3	2	0	0	2	2	2	2	PDZ	domain
PDZ	PF00595.24	gi|289595991|ref|YP_003482687.1|	-	2.4e-05	24.6	0.0	0.012	15.9	0.0	2.5	1	1	1	2	2	2	2	PDZ	domain
Tricorn_PDZ	PF14685.6	gi|289595991|ref|YP_003482687.1|	-	0.064	13.2	0.0	5.7	7.0	0.0	2.4	1	1	1	2	2	2	0	Tricorn	protease	PDZ	domain
Med31	PF05669.12	gi|289595991|ref|YP_003482687.1|	-	0.11	12.6	0.3	0.24	11.4	0.3	1.5	1	0	0	1	1	1	0	SOH1
ERGIC_N	PF13850.6	gi|289595991|ref|YP_003482687.1|	-	2	8.8	6.0	23	5.4	0.0	3.9	4	0	0	4	4	4	0	Endoplasmic	Reticulum-Golgi	Intermediate	Compartment	(ERGIC)
Metallophos	PF00149.28	gi|289595993|ref|YP_003482689.1|	-	2.3e-07	31.5	1.1	4.6e-07	30.5	1.1	1.4	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|289595993|ref|YP_003482689.1|	-	9.6e-05	22.6	0.0	0.00013	22.2	0.0	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Hydrolase_4	PF12146.8	gi|289595994|ref|YP_003482690.1|	-	5.1e-31	107.8	0.0	6e-31	107.5	0.0	1.1	1	0	0	1	1	1	1	Serine	aminopeptidase,	S33
Abhydrolase_1	PF00561.20	gi|289595994|ref|YP_003482690.1|	-	5.4e-13	49.2	0.0	5.6e-09	36.0	0.0	2.1	2	0	0	2	2	2	2	alpha/beta	hydrolase	fold
Abhydrolase_6	PF12697.7	gi|289595994|ref|YP_003482690.1|	-	3.6e-12	47.4	0.0	4.3e-12	47.1	0.0	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Peptidase_S15	PF02129.18	gi|289595994|ref|YP_003482690.1|	-	3.3e-06	26.9	0.0	6.6e-06	25.9	0.0	1.4	1	1	0	1	1	1	1	X-Pro	dipeptidyl-peptidase	(S15	family)
Peptidase_S9	PF00326.21	gi|289595994|ref|YP_003482690.1|	-	1.2e-05	24.9	0.0	0.03	13.8	0.0	2.3	2	0	0	2	2	2	2	Prolyl	oligopeptidase	family
DUF1749	PF08538.10	gi|289595994|ref|YP_003482690.1|	-	2.3e-05	23.6	0.0	5.7e-05	22.3	0.0	1.6	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1749)
PAF-AH_p_II	PF03403.13	gi|289595994|ref|YP_003482690.1|	-	0.0092	14.5	0.0	0.016	13.7	0.0	1.4	1	0	0	1	1	1	1	Platelet-activating	factor	acetylhydrolase,	isoform	II
Abhydrolase_2	PF02230.16	gi|289595994|ref|YP_003482690.1|	-	0.01	15.7	0.0	0.077	12.8	0.0	2.3	3	0	0	3	3	3	1	Phospholipase/Carboxylesterase
Ser_hydrolase	PF06821.13	gi|289595994|ref|YP_003482690.1|	-	0.011	15.6	0.0	0.16	11.8	0.0	2.0	2	0	0	2	2	2	0	Serine	hydrolase
DLH	PF01738.18	gi|289595994|ref|YP_003482690.1|	-	0.018	14.6	0.0	3.4	7.1	0.0	2.6	2	1	0	2	2	2	0	Dienelactone	hydrolase	family
Abhydrolase_4	PF08386.10	gi|289595994|ref|YP_003482690.1|	-	0.022	14.9	0.0	0.042	14.0	0.0	1.4	1	0	0	1	1	1	0	TAP-like	protein
LCAT	PF02450.15	gi|289595994|ref|YP_003482690.1|	-	0.05	12.8	0.0	0.082	12.1	0.0	1.2	1	0	0	1	1	1	0	Lecithin:cholesterol	acyltransferase
DUF676	PF05057.14	gi|289595994|ref|YP_003482690.1|	-	0.053	13.0	0.0	0.09	12.3	0.0	1.3	1	0	0	1	1	1	0	Putative	serine	esterase	(DUF676)
AbiH	PF14253.6	gi|289595994|ref|YP_003482690.1|	-	0.066	13.1	0.1	0.33	10.8	0.0	2.1	2	1	0	2	2	2	0	Bacteriophage	abortive	infection	AbiH
Thioesterase	PF00975.20	gi|289595994|ref|YP_003482690.1|	-	0.079	13.1	0.0	0.12	12.5	0.0	1.2	1	0	0	1	1	1	0	Thioesterase	domain
AXE1	PF05448.12	gi|289595994|ref|YP_003482690.1|	-	0.12	11.0	0.0	0.74	8.4	0.0	1.9	2	0	0	2	2	2	0	Acetyl	xylan	esterase	(AXE1)
DUF3089	PF11288.8	gi|289595994|ref|YP_003482690.1|	-	0.25	10.9	0.0	0.53	9.8	0.0	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3089)
ATP-grasp_5	PF13549.6	gi|289595995|ref|YP_003482691.1|	-	1.2e-56	191.6	0.5	1.4e-56	191.4	0.5	1.0	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_2	PF08442.10	gi|289595995|ref|YP_003482691.1|	-	0.0029	17.2	0.2	0.0056	16.3	0.2	1.8	1	1	0	1	1	1	1	ATP-grasp	domain
Succ_CoA_lig	PF13607.6	gi|289595996|ref|YP_003482692.1|	-	1.6e-53	180.2	1.4	1.3e-50	170.8	0.1	3.0	3	0	0	3	3	3	2	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding_2	PF13380.6	gi|289595996|ref|YP_003482692.1|	-	1.1e-23	84.0	0.1	1.1e-22	80.8	0.0	2.6	3	0	0	3	3	3	1	CoA	binding	domain
CoA_binding	PF02629.19	gi|289595996|ref|YP_003482692.1|	-	3.8e-10	40.3	1.2	1.5e-09	38.4	0.1	2.5	3	0	0	3	3	3	1	CoA	binding	domain
IFN-gamma	PF00714.17	gi|289595996|ref|YP_003482692.1|	-	0.062	13.1	0.0	0.28	11.0	0.0	2.0	2	0	0	2	2	2	0	Interferon	gamma
THF_DHG_CYH	PF00763.23	gi|289595996|ref|YP_003482692.1|	-	0.13	12.5	0.0	0.32	11.3	0.0	1.7	1	0	0	1	1	1	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	catalytic	domain
ATP-grasp_5	PF13549.6	gi|289595997|ref|YP_003482693.1|	-	1.8e-78	263.0	0.1	2.6e-78	262.5	0.1	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
Succ_CoA_lig	PF13607.6	gi|289595997|ref|YP_003482693.1|	-	4.8e-47	159.2	0.4	3.7e-46	156.3	0.1	2.7	3	0	0	3	3	3	1	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding_2	PF13380.6	gi|289595997|ref|YP_003482693.1|	-	1.5e-25	89.9	0.3	7.9e-25	87.6	0.2	2.3	3	0	0	3	3	3	1	CoA	binding	domain
CoA_binding	PF02629.19	gi|289595997|ref|YP_003482693.1|	-	7.4e-17	61.8	0.2	1.8e-16	60.6	0.2	1.7	1	0	0	1	1	1	1	CoA	binding	domain
ATP-grasp_2	PF08442.10	gi|289595997|ref|YP_003482693.1|	-	2.1e-06	27.5	0.1	3.4e-06	26.8	0.1	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
CPSase_L_D2	PF02786.17	gi|289595997|ref|YP_003482693.1|	-	0.11	12.0	0.1	0.21	11.0	0.1	1.5	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Wzz	PF02706.15	gi|289595999|ref|YP_003482695.1|	-	5.9	7.3	13.6	1.1	9.5	9.6	1.7	1	1	1	2	2	2	0	Chain	length	determinant	protein
DUF4131	PF13567.6	gi|289595999|ref|YP_003482695.1|	-	7.9	6.1	11.2	8.8	6.0	11.2	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
PAS_9	PF13426.7	gi|289596000|ref|YP_003482696.1|	-	5.9e-08	32.9	0.1	2.5e-07	30.9	0.0	2.1	2	0	0	2	2	2	1	PAS	domain
PAS_8	PF13188.7	gi|289596000|ref|YP_003482696.1|	-	8.5e-08	32.0	0.0	6.6e-07	29.2	0.0	2.4	3	0	0	3	3	3	1	PAS	domain
PAS_4	PF08448.10	gi|289596000|ref|YP_003482696.1|	-	5.4e-07	29.8	0.0	7.9e-06	26.1	0.0	2.2	1	1	0	1	1	1	1	PAS	fold
PAS	PF00989.25	gi|289596000|ref|YP_003482696.1|	-	9.6e-07	28.8	0.0	3.2e-06	27.1	0.0	2.0	1	1	0	1	1	1	1	PAS	fold
GAF_2	PF13185.6	gi|289596000|ref|YP_003482696.1|	-	1.7e-05	25.1	0.0	0.00091	19.5	0.0	2.3	1	1	1	2	2	2	1	GAF	domain
GAF_3	PF13492.6	gi|289596000|ref|YP_003482696.1|	-	7.4e-05	23.1	0.0	0.00024	21.5	0.0	1.9	2	1	1	3	3	3	1	GAF	domain
HisKA	PF00512.25	gi|289596000|ref|YP_003482696.1|	-	0.0055	16.7	3.5	0.012	15.6	0.1	2.8	2	1	1	3	3	3	1	His	Kinase	A	(phospho-acceptor)	domain
GAF	PF01590.26	gi|289596000|ref|YP_003482696.1|	-	0.0078	16.9	0.0	0.013	16.1	0.0	1.5	1	0	0	1	1	1	1	GAF	domain
DUF3369	PF11849.8	gi|289596000|ref|YP_003482696.1|	-	0.014	15.6	0.1	0.031	14.5	0.1	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF3369)
CBS	PF00571.28	gi|289596001|ref|YP_003482697.1|	-	4.9e-16	58.9	2.3	7.9e-08	32.6	0.1	2.3	2	1	0	2	2	2	2	CBS	domain
Na_H_Exchanger	PF00999.21	gi|289596002|ref|YP_003482698.1|	-	2.5e-44	151.6	53.5	3.1e-44	151.3	53.5	1.0	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
Phosphodiest	PF01663.22	gi|289596003|ref|YP_003482699.1|	-	7.6e-17	61.9	0.4	1.2e-15	58.0	0.4	2.2	1	1	0	1	1	1	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
PglZ	PF08665.12	gi|289596003|ref|YP_003482699.1|	-	0.0039	17.3	0.0	0.74	9.9	0.1	2.2	2	0	0	2	2	2	2	PglZ	domain
Pro-kuma_activ	PF09286.11	gi|289596004|ref|YP_003482700.1|	-	6.8e-29	101.0	0.0	1.7e-28	99.7	0.0	1.6	1	0	0	1	1	1	1	Pro-kumamolisin,	activation	domain
fn3	PF00041.21	gi|289596004|ref|YP_003482700.1|	-	1.2e-17	64.1	17.1	2.8e-09	37.2	2.6	3.7	3	0	0	3	3	3	2	Fibronectin	type	III	domain
Tissue_fac	PF01108.17	gi|289596004|ref|YP_003482700.1|	-	0.0015	18.3	0.3	0.87	9.5	0.0	3.1	2	1	0	2	2	2	2	Tissue	factor
DUF4959	PF16323.5	gi|289596004|ref|YP_003482700.1|	-	0.015	15.6	2.4	4.8	7.5	0.1	2.8	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4959)
DUF1722	PF08349.11	gi|289596004|ref|YP_003482700.1|	-	0.15	12.4	0.0	0.31	11.3	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1722)
NPCBM_assoc	PF10633.9	gi|289596004|ref|YP_003482700.1|	-	0.19	12.0	2.8	0.69	10.2	0.1	3.4	3	1	0	3	3	3	0	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
IMPDH	PF00478.25	gi|289596005|ref|YP_003482701.1|	-	4.8e-151	502.6	4.3	5.5e-151	502.4	4.3	1.0	1	0	0	1	1	1	1	IMP	dehydrogenase	/	GMP	reductase	domain
CBS	PF00571.28	gi|289596005|ref|YP_003482701.1|	-	2.5e-30	104.7	1.7	3e-14	53.2	0.1	3.0	2	0	0	2	2	2	2	CBS	domain
NMO	PF03060.15	gi|289596005|ref|YP_003482701.1|	-	3.6e-13	49.6	2.9	2.6e-08	33.7	2.3	2.2	2	0	0	2	2	2	2	Nitronate	monooxygenase
FMN_dh	PF01070.18	gi|289596005|ref|YP_003482701.1|	-	1.4e-11	44.0	2.2	6.6e-11	41.8	1.7	2.1	2	0	0	2	2	2	1	FMN-dependent	dehydrogenase
His_biosynth	PF00977.21	gi|289596005|ref|YP_003482701.1|	-	1.8e-09	37.4	2.0	3.6e-09	36.4	2.0	1.5	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
G3P_antiterm	PF04309.12	gi|289596005|ref|YP_003482701.1|	-	0.00016	21.1	0.7	0.035	13.5	0.0	2.6	2	0	0	2	2	2	2	Glycerol-3-phosphate	responsive	antiterminator
ThiG	PF05690.14	gi|289596005|ref|YP_003482701.1|	-	0.00047	19.5	0.4	0.00047	19.5	0.4	2.6	3	0	0	3	3	3	1	Thiazole	biosynthesis	protein	ThiG
DHO_dh	PF01180.21	gi|289596005|ref|YP_003482701.1|	-	0.0012	18.1	0.4	0.0012	18.1	0.4	1.9	3	0	0	3	3	3	1	Dihydroorotate	dehydrogenase
Glu_synthase	PF01645.17	gi|289596005|ref|YP_003482701.1|	-	0.0014	17.8	3.1	0.0032	16.7	3.1	1.6	1	0	0	1	1	1	1	Conserved	region	in	glutamate	synthase
Dus	PF01207.17	gi|289596005|ref|YP_003482701.1|	-	0.003	16.7	0.3	0.029	13.5	0.0	2.2	2	0	0	2	2	2	1	Dihydrouridine	synthase	(Dus)
DUF561	PF04481.12	gi|289596005|ref|YP_003482701.1|	-	0.0032	16.7	2.3	0.0083	15.3	0.2	2.3	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF561)
EAL	PF00563.20	gi|289596005|ref|YP_003482701.1|	-	0.013	15.1	0.2	0.078	12.5	0.2	2.0	2	0	0	2	2	2	0	EAL	domain
Radical_SAM	PF04055.21	gi|289596005|ref|YP_003482701.1|	-	0.014	15.7	1.0	1	9.7	0.1	2.6	2	0	0	2	2	2	0	Radical	SAM	superfamily
Com_YlbF	PF06133.11	gi|289596007|ref|YP_003482703.1|	-	6.3e-25	87.8	20.1	7.3e-25	87.6	20.1	1.1	1	0	0	1	1	1	1	Control	of	competence	regulator	ComK,	YlbF/YmcA
PSD1	PF07587.11	gi|289596007|ref|YP_003482703.1|	-	0.0057	16.2	1.9	0.0073	15.8	1.9	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1553)
Stk19	PF10494.9	gi|289596007|ref|YP_003482703.1|	-	0.068	12.8	6.2	1.2	8.8	1.5	2.0	1	1	1	2	2	2	0	Serine-threonine	protein	kinase	19
Moulting_cycle	PF04870.16	gi|289596007|ref|YP_003482703.1|	-	0.071	12.4	12.4	0.082	12.2	12.4	1.1	1	0	0	1	1	1	0	Moulting	cycle
EB1_binding	PF05937.11	gi|289596007|ref|YP_003482703.1|	-	0.43	11.1	2.7	0.54	10.8	2.7	1.1	1	0	0	1	1	1	0	EB-1	Binding	Domain
SPT16	PF08644.11	gi|289596007|ref|YP_003482703.1|	-	0.63	10.2	9.8	0.39	10.9	6.7	1.8	1	1	1	2	2	2	0	FACT	complex	subunit	(SPT16/CDC68)
Complex1_LYR_2	PF13233.6	gi|289596007|ref|YP_003482703.1|	-	0.98	10.2	9.2	3	8.7	2.2	2.5	1	1	1	2	2	2	0	Complex1_LYR-like
Vma12	PF11712.8	gi|289596007|ref|YP_003482703.1|	-	1.6	8.8	7.0	2.8	8.0	7.0	1.6	1	1	0	1	1	1	0	Endoplasmic	reticulum-based	factor	for	assembly	of	V-ATPase
OmpH	PF03938.14	gi|289596007|ref|YP_003482703.1|	-	9.5	6.6	21.4	13	6.1	21.4	1.3	1	0	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
IF-2B	PF01008.17	gi|289596008|ref|YP_003482704.1|	-	2.9e-89	299.0	0.1	3.3e-89	298.8	0.1	1.0	1	0	0	1	1	1	1	Initiation	factor	2	subunit	family
Glycos_trans_3N	PF02885.17	gi|289596009|ref|YP_003482705.1|	-	1.7e-17	63.0	0.1	4.3e-17	61.7	0.1	1.8	1	0	0	1	1	1	1	Glycosyl	transferase	family,	helical	bundle	domain
Glycos_transf_3	PF00591.21	gi|289596009|ref|YP_003482705.1|	-	2.7e-11	43.5	1.8	3.7e-10	39.8	1.8	2.3	1	1	0	1	1	1	1	Glycosyl	transferase	family,	a/b	domain
PYNP_C	PF07831.13	gi|289596009|ref|YP_003482705.1|	-	3e-11	42.8	0.4	3e-11	42.8	0.4	2.1	2	0	0	2	2	2	1	Pyrimidine	nucleoside	phosphorylase	C-terminal	domain
CDC48_N	PF02359.18	gi|289596009|ref|YP_003482705.1|	-	0.00025	21.2	0.5	0.00078	19.6	0.5	1.9	1	0	0	1	1	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
Molydop_binding	PF01568.21	gi|289596009|ref|YP_003482705.1|	-	0.0016	18.5	0.2	0.0074	16.3	0.1	2.0	1	1	1	2	2	2	1	Molydopterin	dinucleotide	binding	domain
DUF2254	PF10011.9	gi|289596009|ref|YP_003482705.1|	-	0.07	11.9	0.0	0.1	11.4	0.0	1.2	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2254)
SopD	PF11047.8	gi|289596009|ref|YP_003482705.1|	-	0.078	12.1	0.3	0.13	11.4	0.3	1.3	1	0	0	1	1	1	0	Salmonella	outer	protein	D
ZnuA	PF01297.17	gi|289596010|ref|YP_003482706.1|	-	6.9e-34	117.4	0.2	8.5e-34	117.1	0.2	1.1	1	0	0	1	1	1	1	Zinc-uptake	complex	component	A	periplasmic
Fun_ATP-synt_8	PF05933.13	gi|289596010|ref|YP_003482706.1|	-	2.2	8.5	5.2	2.7	8.2	1.1	2.5	2	0	0	2	2	2	0	Fungal	ATP	synthase	protein	8	(A6L)
SPP	PF06550.11	gi|289596011|ref|YP_003482707.1|	-	2.2e-55	188.2	25.8	2.5e-55	187.9	25.8	1.0	1	0	0	1	1	1	1	Signal-peptide	peptidase,	presenilin	aspartyl	protease
Peptidase_A22B	PF04258.13	gi|289596011|ref|YP_003482707.1|	-	1.2e-07	31.6	17.5	2.7e-07	30.4	17.5	1.8	1	1	0	1	1	1	1	Signal	peptide	peptidase
Topoisom_bac	PF01131.20	gi|289596012|ref|YP_003482708.1|	-	4.4e-125	417.9	1.0	5.4e-125	417.6	1.0	1.1	1	0	0	1	1	1	1	DNA	topoisomerase
zf-C4_Topoisom	PF01396.19	gi|289596012|ref|YP_003482708.1|	-	1.1e-17	63.6	3.2	1.1e-17	63.6	3.2	3.9	4	0	0	4	4	3	2	Topoisomerase	DNA	binding	C4	zinc	finger
Toprim	PF01751.22	gi|289596012|ref|YP_003482708.1|	-	9e-16	58.0	0.0	2.6e-15	56.5	0.0	1.8	1	0	0	1	1	1	1	Toprim	domain
Auto_anti-p27	PF06677.12	gi|289596012|ref|YP_003482708.1|	-	0.00019	21.5	7.5	0.059	13.5	0.1	3.4	3	0	0	3	3	3	2	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zf-ribbon_3	PF13248.6	gi|289596012|ref|YP_003482708.1|	-	0.00031	20.1	12.7	0.44	10.0	0.1	4.3	4	0	0	4	4	4	2	zinc-ribbon	domain
DNA_ligase_ZBD	PF03119.16	gi|289596012|ref|YP_003482708.1|	-	0.00031	20.7	12.1	1.1	9.3	1.1	3.8	3	0	0	3	3	3	3	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Lar_restr_allev	PF14354.6	gi|289596012|ref|YP_003482708.1|	-	0.0024	18.2	11.6	0.53	10.7	0.6	3.5	2	1	1	3	3	3	2	Restriction	alleviation	protein	Lar
Ribosomal_S27	PF01599.19	gi|289596012|ref|YP_003482708.1|	-	0.0028	17.8	1.0	0.2	11.9	0.1	3.5	3	0	0	3	3	3	1	Ribosomal	protein	S27a
Zn_ribbon_recom	PF13408.6	gi|289596012|ref|YP_003482708.1|	-	0.0078	16.7	15.4	0.063	13.8	1.6	3.9	3	0	0	3	3	3	2	Recombinase	zinc	beta	ribbon	domain
UvrB_inter	PF17757.1	gi|289596012|ref|YP_003482708.1|	-	0.02	15.1	0.3	0.11	12.7	0.0	2.4	2	0	0	2	2	2	0	UvrB	interaction	domain
DZR	PF12773.7	gi|289596012|ref|YP_003482708.1|	-	0.044	13.8	5.1	16	5.6	5.1	2.7	1	1	0	1	1	1	0	Double	zinc	ribbon
zf-C2HC5	PF06221.13	gi|289596012|ref|YP_003482708.1|	-	0.16	12.0	1.8	38	4.4	0.0	3.3	3	0	0	3	3	3	0	Putative	zinc	finger	motif,	C2HC5-type
TF_Zn_Ribbon	PF08271.12	gi|289596012|ref|YP_003482708.1|	-	0.16	11.5	4.1	11	5.6	0.1	3.6	3	0	0	3	3	3	0	TFIIB	zinc-binding
ADK_lid	PF05191.14	gi|289596012|ref|YP_003482708.1|	-	0.26	11.3	16.2	1.2	9.2	2.8	3.6	3	0	0	3	3	3	0	Adenylate	kinase,	active	site	lid
zf-IS66	PF13005.7	gi|289596012|ref|YP_003482708.1|	-	0.66	10.4	6.0	46	4.5	0.2	4.0	4	0	0	4	4	3	0	zinc-finger	binding	domain	of	transposase	IS66
zinc-ribbons_6	PF07191.12	gi|289596012|ref|YP_003482708.1|	-	1.2	9.1	6.0	3.2	7.8	2.1	2.4	1	1	1	2	2	2	0	zinc-ribbons
Zn-ribbon_8	PF09723.10	gi|289596012|ref|YP_003482708.1|	-	1.5	9.0	8.7	29	4.9	0.6	3.8	4	0	0	4	4	3	0	Zinc	ribbon	domain
Ogr_Delta	PF04606.12	gi|289596012|ref|YP_003482708.1|	-	1.5	8.8	12.4	1.2	9.2	0.3	4.3	3	2	0	3	3	3	0	Ogr/Delta-like	zinc	finger
DUF2256	PF10013.9	gi|289596012|ref|YP_003482708.1|	-	1.8	8.8	5.3	5.2	7.3	0.2	2.8	3	0	0	3	3	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2256)
zinc_ribbon_2	PF13240.6	gi|289596012|ref|YP_003482708.1|	-	4	7.3	15.7	1.4	8.7	0.5	4.3	4	0	0	4	4	4	0	zinc-ribbon	domain
DUF1272	PF06906.11	gi|289596012|ref|YP_003482708.1|	-	4.2	7.5	9.1	0.59	10.3	0.6	3.4	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF1272)
zf-TFIIB	PF13453.6	gi|289596012|ref|YP_003482708.1|	-	7.4	6.0	9.5	3.6	7.0	0.2	3.5	3	0	0	3	3	3	0	Transcription	factor	zinc-finger
UPF0051	PF01458.17	gi|289596013|ref|YP_003482709.1|	-	3.6e-55	187.0	0.0	4.6e-55	186.7	0.0	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
ABC_tran	PF00005.27	gi|289596014|ref|YP_003482710.1|	-	3e-21	76.4	0.0	4.4e-21	75.8	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|289596014|ref|YP_003482710.1|	-	1.5e-07	31.6	3.4	0.0019	18.1	0.3	2.2	1	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|289596014|ref|YP_003482710.1|	-	3.7e-06	26.5	0.3	0.00011	21.7	0.3	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.6	gi|289596014|ref|YP_003482710.1|	-	0.00097	18.8	0.1	0.0019	17.9	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_27	PF13514.6	gi|289596014|ref|YP_003482710.1|	-	0.0014	18.3	0.1	0.0024	17.5	0.1	1.3	1	0	0	1	1	1	1	AAA	domain
RsgA_GTPase	PF03193.16	gi|289596014|ref|YP_003482710.1|	-	0.0014	18.5	0.1	0.0027	17.6	0.1	1.4	1	0	0	1	1	1	1	RsgA	GTPase
AAA_22	PF13401.6	gi|289596014|ref|YP_003482710.1|	-	0.0026	18.0	0.2	0.021	15.1	0.2	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.6	gi|289596014|ref|YP_003482710.1|	-	0.01	16.4	0.4	0.015	15.9	0.3	1.5	1	1	0	1	1	1	0	AAA	domain
AAA_25	PF13481.6	gi|289596014|ref|YP_003482710.1|	-	0.01	15.4	0.0	0.02	14.5	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_13	PF13166.6	gi|289596014|ref|YP_003482710.1|	-	0.015	13.9	0.5	0.16	10.6	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
IstB_IS21	PF01695.17	gi|289596014|ref|YP_003482710.1|	-	0.021	14.6	0.1	1.4	8.6	0.0	2.2	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
NACHT	PF05729.12	gi|289596014|ref|YP_003482710.1|	-	0.035	14.0	0.1	1.2	9.1	0.0	2.1	2	0	0	2	2	2	0	NACHT	domain
AAA_24	PF13479.6	gi|289596014|ref|YP_003482710.1|	-	0.063	13.0	0.0	0.12	12.1	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_15	PF13175.6	gi|289596014|ref|YP_003482710.1|	-	0.085	12.6	0.5	0.13	12.0	0.4	1.6	1	1	1	2	2	2	0	AAA	ATPase	domain
AAA_33	PF13671.6	gi|289596014|ref|YP_003482710.1|	-	0.091	12.9	0.0	0.15	12.2	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
Mg_chelatase	PF01078.21	gi|289596014|ref|YP_003482710.1|	-	0.1	12.0	0.0	0.16	11.3	0.0	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_18	PF13238.6	gi|289596014|ref|YP_003482710.1|	-	0.13	12.8	0.1	0.4	11.2	0.0	1.9	2	1	0	2	2	2	0	AAA	domain
AAA_16	PF13191.6	gi|289596014|ref|YP_003482710.1|	-	0.13	12.6	0.0	0.17	12.3	0.0	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
ACP_syn_III_C	PF08541.10	gi|289596015|ref|YP_003482711.1|	-	1.1e-10	41.5	0.0	2.3e-10	40.5	0.0	1.5	1	0	0	1	1	1	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III	C	terminal
Thiolase_N	PF00108.23	gi|289596015|ref|YP_003482711.1|	-	9.1e-06	25.2	0.1	1.4e-05	24.6	0.1	1.2	1	0	0	1	1	1	1	Thiolase,	N-terminal	domain
HMG_CoA_synt_N	PF01154.17	gi|289596015|ref|YP_003482711.1|	-	9.5e-06	25.6	0.0	1.4e-05	25.0	0.0	1.2	1	0	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	synthase	N	terminal
HMG_CoA_synt_C	PF08540.10	gi|289596015|ref|YP_003482711.1|	-	0.00054	19.7	0.0	0.018	14.7	0.0	2.1	1	1	1	2	2	2	1	Hydroxymethylglutaryl-coenzyme	A	synthase	C	terminal
ACP_syn_III	PF08545.10	gi|289596015|ref|YP_003482711.1|	-	0.0025	17.6	1.9	0.024	14.5	0.3	2.4	2	0	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Phage_TAC_11	PF11836.8	gi|289596015|ref|YP_003482711.1|	-	0.058	13.5	0.0	0.11	12.6	0.0	1.4	1	0	0	1	1	1	0	Phage	tail	tube	protein,	GTA-gp10
Thiolase_N	PF00108.23	gi|289596016|ref|YP_003482712.1|	-	8.8e-29	100.6	0.3	2.5e-28	99.1	0.3	1.8	1	1	0	1	1	1	1	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.18	gi|289596016|ref|YP_003482712.1|	-	6e-14	51.8	0.1	8.7e-13	48.0	0.1	2.5	2	0	0	2	2	2	1	Thiolase,	C-terminal	domain
ketoacyl-synt	PF00109.26	gi|289596016|ref|YP_003482712.1|	-	8.2e-09	35.4	5.1	6e-07	29.3	5.1	2.6	1	1	0	1	1	1	1	Beta-ketoacyl	synthase,	N-terminal	domain
Ketoacyl-synt_C	PF02801.22	gi|289596016|ref|YP_003482712.1|	-	0.00021	21.3	0.1	0.15	12.1	0.0	3.5	3	0	0	3	3	3	1	Beta-ketoacyl	synthase,	C-terminal	domain
ACP_syn_III	PF08545.10	gi|289596016|ref|YP_003482712.1|	-	0.00022	21.0	0.2	0.056	13.3	0.1	2.4	2	0	0	2	2	2	2	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
SpoVAD	PF07451.11	gi|289596016|ref|YP_003482712.1|	-	0.0015	17.3	0.0	0.0037	16.0	0.0	1.6	1	0	0	1	1	1	1	Stage	V	sporulation	protein	AD	(SpoVAD)
DUF5036	PF16439.5	gi|289596016|ref|YP_003482712.1|	-	0.18	11.5	0.0	0.3	10.8	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5036)
OB_aCoA_assoc	PF01796.17	gi|289596017|ref|YP_003482713.1|	-	2.7e-23	81.7	0.1	3.8e-23	81.2	0.1	1.2	1	0	0	1	1	1	1	DUF35	OB-fold	domain,	acyl-CoA-associated
DUF35_N	PF12172.8	gi|289596017|ref|YP_003482713.1|	-	2.5e-13	49.6	2.4	3.6e-13	49.1	2.4	1.2	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Auto_anti-p27	PF06677.12	gi|289596017|ref|YP_003482713.1|	-	0.003	17.7	1.3	0.0051	17.0	1.3	1.4	1	0	0	1	1	1	1	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
DUF4776	PF16003.5	gi|289596017|ref|YP_003482713.1|	-	0.018	14.1	0.2	0.021	13.8	0.2	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4776)
DZR	PF12773.7	gi|289596017|ref|YP_003482713.1|	-	0.022	14.8	0.6	0.034	14.2	0.6	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
zf-FPG_IleRS	PF06827.14	gi|289596017|ref|YP_003482713.1|	-	0.047	13.6	1.8	4.4	7.2	0.4	2.5	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
Ribosomal_L32p	PF01783.23	gi|289596017|ref|YP_003482713.1|	-	0.061	13.6	0.7	0.098	12.9	0.7	1.3	1	0	0	1	1	1	0	Ribosomal	L32p	protein	family
TackOD1	PF18551.1	gi|289596017|ref|YP_003482713.1|	-	0.082	12.6	0.1	0.1	12.3	0.1	1.3	1	0	0	1	1	1	0	Thaumarchaeal	output	domain	1
zinc_ribbon_2	PF13240.6	gi|289596017|ref|YP_003482713.1|	-	0.086	12.6	4.6	1.4	8.7	0.4	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
NOB1_Zn_bind	PF08772.11	gi|289596017|ref|YP_003482713.1|	-	0.087	13.0	1.7	0.18	12.0	1.4	1.7	1	1	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
HypA	PF01155.19	gi|289596017|ref|YP_003482713.1|	-	0.14	12.2	0.3	0.24	11.4	0.3	1.3	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Zn_Tnp_IS1595	PF12760.7	gi|289596017|ref|YP_003482713.1|	-	0.21	11.6	6.3	0.23	11.5	0.3	2.2	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|289596017|ref|YP_003482713.1|	-	0.23	10.9	6.6	0.74	9.3	6.6	1.8	1	1	0	1	1	1	0	zinc-ribbon	domain
DNA_ligase_ZBD	PF03119.16	gi|289596017|ref|YP_003482713.1|	-	0.25	11.4	5.9	3.5	7.7	1.3	2.3	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Nudix_N_2	PF14803.6	gi|289596017|ref|YP_003482713.1|	-	0.27	11.2	5.2	1.5	8.8	0.7	2.5	2	0	0	2	2	2	0	Nudix	N-terminal
Mu-like_Com	PF10122.9	gi|289596017|ref|YP_003482713.1|	-	0.32	10.5	1.1	2.9	7.4	0.1	2.2	2	0	0	2	2	2	0	Mu-like	prophage	protein	Com
TF_Zn_Ribbon	PF08271.12	gi|289596017|ref|YP_003482713.1|	-	0.34	10.5	6.8	1.5	8.4	6.8	2.0	1	1	0	1	1	1	0	TFIIB	zinc-binding
zf-NADH-PPase	PF09297.11	gi|289596017|ref|YP_003482713.1|	-	0.37	10.5	2.8	11	5.8	0.1	2.2	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
zf-C2H2_3	PF13878.6	gi|289596017|ref|YP_003482713.1|	-	0.76	9.7	0.1	0.76	9.7	0.1	2.2	1	1	1	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
zf-ACC	PF17848.1	gi|289596017|ref|YP_003482713.1|	-	0.8	9.8	5.2	13	6.0	0.1	2.3	2	0	0	2	2	2	0	Acetyl-coA	carboxylase	zinc	finger	domain
ADK_lid	PF05191.14	gi|289596017|ref|YP_003482713.1|	-	0.92	9.5	6.9	3.9	7.6	1.8	2.5	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
zf-ISL3	PF14690.6	gi|289596017|ref|YP_003482713.1|	-	1.3	9.8	5.8	2	9.2	0.1	2.5	3	0	0	3	3	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Zn-ribbon_8	PF09723.10	gi|289596017|ref|YP_003482713.1|	-	1.3	9.2	6.6	42	4.4	0.5	2.4	1	1	1	2	2	2	0	Zinc	ribbon	domain
Rad50_zn_hook	PF04423.14	gi|289596017|ref|YP_003482713.1|	-	4.8	7.1	6.5	6.6	6.7	0.2	2.2	2	0	0	2	2	2	0	Rad50	zinc	hook	motif
zf-C2H2	PF00096.26	gi|289596017|ref|YP_003482713.1|	-	5.6	7.6	5.0	42	4.9	0.5	2.6	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
Mut7-C	PF01927.16	gi|289596018|ref|YP_003482714.1|	-	2.4e-49	167.2	0.1	2.7e-49	167.0	0.1	1.0	1	0	0	1	1	1	1	Mut7-C	RNAse	domain
DUF5615	PF18480.1	gi|289596018|ref|YP_003482714.1|	-	1.8e-06	27.6	0.0	2.9e-06	26.9	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF5615)
PIN_10	PF18478.1	gi|289596018|ref|YP_003482714.1|	-	0.0015	18.7	0.1	0.0059	16.8	0.1	1.9	1	1	0	1	1	1	1	PIN	like	domain
E6	PF00518.17	gi|289596018|ref|YP_003482714.1|	-	0.0084	16.5	0.9	0.29	11.6	0.6	2.1	1	1	1	2	2	2	2	Early	Protein	(E6)
DUF3922	PF13059.6	gi|289596018|ref|YP_003482714.1|	-	0.01	16.3	0.1	0.019	15.4	0.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3992)
ADK_lid	PF05191.14	gi|289596018|ref|YP_003482714.1|	-	0.021	14.8	1.0	2.7	8.0	0.1	2.4	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
RNase_Zc3h12a	PF11977.8	gi|289596018|ref|YP_003482714.1|	-	0.031	14.0	0.1	1.8	8.3	0.1	2.2	1	1	0	1	1	1	0	Zc3h12a-like	Ribonuclease	NYN	domain
zf_CopZ	PF18423.1	gi|289596018|ref|YP_003482714.1|	-	0.076	13.0	1.7	0.13	12.2	1.7	1.4	1	0	0	1	1	1	0	Zinc	binding	domain
Ribosomal_L28e	PF01778.17	gi|289596018|ref|YP_003482714.1|	-	0.1	13.4	0.1	0.14	12.9	0.1	1.3	1	0	0	1	1	1	0	Ribosomal	L28e	protein	family
zf-TFIIB	PF13453.6	gi|289596018|ref|YP_003482714.1|	-	0.24	10.7	3.0	4.2	6.8	3.0	2.3	1	1	0	1	1	1	0	Transcription	factor	zinc-finger
eRF1_3	PF03465.15	gi|289596019|ref|YP_003482715.1|	-	5.4e-21	75.2	1.0	4e-20	72.4	1.0	2.3	1	1	0	1	1	1	1	eRF1	domain	3
eRF1_1	PF03463.15	gi|289596019|ref|YP_003482715.1|	-	2.5e-18	66.3	0.1	4.6e-18	65.5	0.1	1.4	1	0	0	1	1	1	1	eRF1	domain	1
eRF1_2	PF03464.15	gi|289596019|ref|YP_003482715.1|	-	0.0038	17.5	0.1	0.58	10.5	0.0	3.0	2	1	0	3	3	3	1	eRF1	domain	2
SpoU_sub_bind	PF08032.12	gi|289596019|ref|YP_003482715.1|	-	0.038	14.3	2.0	0.24	11.7	0.1	2.7	3	0	0	3	3	3	0	RNA	2'-O	ribose	methyltransferase	substrate	binding
YajC	PF02699.15	gi|289596020|ref|YP_003482716.1|	-	0.36	10.7	0.2	0.36	10.7	0.2	2.5	3	0	0	3	3	3	0	Preprotein	translocase	subunit
FUSC	PF04632.12	gi|289596020|ref|YP_003482716.1|	-	1.3	7.5	6.3	1.7	7.1	6.3	1.2	1	0	0	1	1	1	0	Fusaric	acid	resistance	protein	family
FeoB_associated	PF12669.7	gi|289596020|ref|YP_003482716.1|	-	2.5	8.6	4.7	44	4.6	0.0	3.3	3	0	0	3	3	3	0	FeoB-associated	Cys-rich	membrane	protein
ATG27	PF09451.10	gi|289596020|ref|YP_003482716.1|	-	3.9	7.2	3.8	6	6.6	3.8	1.3	1	0	0	1	1	1	0	Autophagy-related	protein	27
DUF58	PF01882.18	gi|289596021|ref|YP_003482717.1|	-	1.8e-24	85.8	0.2	3e-24	85.1	0.2	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF58
AAA_3	PF07726.11	gi|289596022|ref|YP_003482718.1|	-	3.2e-67	224.4	0.0	5e-67	223.7	0.0	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_lid_2	PF17863.1	gi|289596022|ref|YP_003482718.1|	-	4.6e-20	71.2	0.2	7.3e-20	70.6	0.2	1.3	1	0	0	1	1	1	1	AAA	lid	domain
AAA_5	PF07728.14	gi|289596022|ref|YP_003482718.1|	-	2.5e-13	50.2	0.0	8e-13	48.6	0.0	1.9	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
MCM	PF00493.23	gi|289596022|ref|YP_003482718.1|	-	0.00027	20.1	0.0	0.0012	18.0	0.0	1.9	1	1	0	1	1	1	1	MCM	P-loop	domain
Sigma54_activat	PF00158.26	gi|289596022|ref|YP_003482718.1|	-	0.00069	19.4	0.0	0.0018	18.0	0.0	1.6	1	0	0	1	1	1	1	Sigma-54	interaction	domain
AAA	PF00004.29	gi|289596022|ref|YP_003482718.1|	-	0.0015	19.0	0.0	0.0031	17.9	0.0	1.6	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
MCM_lid	PF17855.1	gi|289596022|ref|YP_003482718.1|	-	0.0033	17.8	0.2	0.0066	16.9	0.2	1.5	1	0	0	1	1	1	1	MCM	AAA-lid	domain
RuvB_N	PF05496.12	gi|289596022|ref|YP_003482718.1|	-	0.016	14.9	0.0	0.18	11.5	0.0	2.3	1	1	0	1	1	1	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
Mg_chelatase	PF01078.21	gi|289596022|ref|YP_003482718.1|	-	0.04	13.3	0.0	6.2	6.1	0.0	2.2	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
DUF4129	PF13559.6	gi|289596024|ref|YP_003482720.1|	-	4.7e-06	26.8	0.0	8e-06	26.0	0.0	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4129)
DUF1129	PF06570.11	gi|289596024|ref|YP_003482720.1|	-	0.00096	18.7	0.8	0.61	9.5	0.0	2.3	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF1129)
DUF2663	PF10864.8	gi|289596024|ref|YP_003482720.1|	-	0.0032	17.9	0.3	0.0088	16.4	0.1	1.8	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF2663)
7tm_3	PF00003.22	gi|289596024|ref|YP_003482720.1|	-	0.0047	16.7	3.9	0.0061	16.3	3.9	1.1	1	0	0	1	1	1	1	7	transmembrane	sweet-taste	receptor	of	3	GCPR
SLAC1	PF03595.17	gi|289596024|ref|YP_003482720.1|	-	0.0071	15.6	4.9	0.0093	15.3	4.6	1.3	1	1	0	1	1	1	1	Voltage-dependent	anion	channel
RseC_MucC	PF04246.12	gi|289596024|ref|YP_003482720.1|	-	0.0073	16.3	6.3	0.55	10.2	3.4	2.3	2	0	0	2	2	2	2	Positive	regulator	of	sigma(E),	RseC/MucC
SUa-2TM	PF18179.1	gi|289596024|ref|YP_003482720.1|	-	0.021	14.1	0.2	0.035	13.4	0.2	1.3	1	0	0	1	1	1	0	SMODS-	and	Ubiquitin	system-associated	2TM	effector	domain
Peptidase_U4	PF03419.13	gi|289596024|ref|YP_003482720.1|	-	0.027	13.8	3.0	0.038	13.3	3.0	1.3	1	0	0	1	1	1	0	Sporulation	factor	SpoIIGA
DUF4064	PF13273.6	gi|289596024|ref|YP_003482720.1|	-	0.057	13.7	11.2	0.64	10.3	2.1	2.4	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF4064)
Spore_III_AB	PF09548.10	gi|289596024|ref|YP_003482720.1|	-	0.07	13.2	3.1	0.4	10.8	3.1	2.1	1	1	0	1	1	1	0	Stage	III	sporulation	protein	AB	(spore_III_AB)
Oxidored_q4	PF00507.19	gi|289596024|ref|YP_003482720.1|	-	0.082	13.1	0.5	0.082	13.1	0.5	1.9	2	0	0	2	2	2	0	NADH-ubiquinone/plastoquinone	oxidoreductase,	chain	3
DUF1180	PF06679.12	gi|289596024|ref|YP_003482720.1|	-	0.09	13.2	0.0	0.18	12.2	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1180)
Pox_P21	PF05313.12	gi|289596024|ref|YP_003482720.1|	-	0.16	11.5	0.2	0.16	11.5	0.2	2.8	3	1	0	3	3	3	0	Poxvirus	P21	membrane	protein
DUF5084	PF16894.5	gi|289596024|ref|YP_003482720.1|	-	0.53	10.7	6.5	0.82	10.1	2.8	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF5084)
Phage_holin_3_6	PF07332.11	gi|289596024|ref|YP_003482720.1|	-	0.83	9.7	12.3	19	5.4	12.3	2.5	1	1	0	1	1	1	0	Putative	Actinobacterial	Holin-X,	holin	superfamily	III
UPF0154	PF03672.13	gi|289596024|ref|YP_003482720.1|	-	1.4	9.0	5.2	1.8	8.6	0.2	3.0	3	0	0	3	3	3	0	Uncharacterised	protein	family	(UPF0154)
Gram_pos_anchor	PF00746.21	gi|289596024|ref|YP_003482720.1|	-	3.7	7.6	11.2	4.6	7.3	0.1	3.3	2	1	1	3	3	3	0	LPXTG	cell	wall	anchor	motif
DUF1043	PF06295.12	gi|289596024|ref|YP_003482720.1|	-	8	6.5	7.1	0.36	10.8	0.5	2.0	3	0	0	3	3	2	0	Protein	of	unknown	function	(DUF1043)
dCMP_cyt_deam_1	PF00383.23	gi|289596025|ref|YP_003482721.1|	-	2.7e-31	107.5	0.8	3.4e-31	107.1	0.8	1.1	1	0	0	1	1	1	1	Cytidine	and	deoxycytidylate	deaminase	zinc-binding	region
MafB19-deam	PF14437.6	gi|289596025|ref|YP_003482721.1|	-	1.5e-29	102.5	0.0	2e-29	102.1	0.0	1.1	1	0	0	1	1	1	1	MafB19-like	deaminase
APOBEC3	PF18771.1	gi|289596025|ref|YP_003482721.1|	-	0.0037	17.4	0.1	0.0055	16.8	0.1	1.2	1	0	0	1	1	1	1	APOBEC3
Bd3614-deam	PF14439.6	gi|289596025|ref|YP_003482721.1|	-	0.02	14.9	0.2	0.064	13.3	0.1	1.8	1	1	1	2	2	2	0	Bd3614-like	deaminase
APOBEC_N	PF08210.11	gi|289596025|ref|YP_003482721.1|	-	0.029	14.3	0.1	0.039	13.9	0.1	1.1	1	0	0	1	1	1	0	APOBEC-like	N-terminal	domain
tRNA-synt_2b	PF00587.25	gi|289596026|ref|YP_003482722.1|	-	1.7e-37	129.1	0.1	3.7e-37	128.0	0.1	1.5	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
Seryl_tRNA_N	PF02403.22	gi|289596026|ref|YP_003482722.1|	-	1.6e-27	95.8	12.7	1.6e-27	95.8	12.7	1.9	2	0	0	2	2	2	1	Seryl-tRNA	synthetase	N-terminal	domain
DUF4200	PF13863.6	gi|289596026|ref|YP_003482722.1|	-	0.019	15.3	12.5	0.019	15.3	12.5	2.2	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4200)
CENP-K	PF11802.8	gi|289596026|ref|YP_003482722.1|	-	0.026	14.1	5.8	0.059	12.9	3.8	2.0	2	0	0	2	2	2	0	Centromere-associated	protein	K
TMF_TATA_bd	PF12325.8	gi|289596026|ref|YP_003482722.1|	-	0.032	14.4	5.8	0.066	13.4	5.8	1.5	1	0	0	1	1	1	0	TATA	element	modulatory	factor	1	TATA	binding
AAA_13	PF13166.6	gi|289596026|ref|YP_003482722.1|	-	0.033	12.9	5.5	0.048	12.3	5.5	1.2	1	0	0	1	1	1	0	AAA	domain
Sipho_Gp157	PF05565.11	gi|289596026|ref|YP_003482722.1|	-	0.033	14.2	7.5	0.08	13.0	7.5	1.6	1	0	0	1	1	1	0	Siphovirus	Gp157
Vps51	PF08700.11	gi|289596026|ref|YP_003482722.1|	-	0.12	12.5	1.6	0.61	10.2	1.6	2.2	1	1	0	1	1	1	0	Vps51/Vps67
tRNA-synt_2	PF00152.20	gi|289596026|ref|YP_003482722.1|	-	0.14	11.2	1.0	0.24	10.4	0.0	1.8	2	1	0	2	2	2	0	tRNA	synthetases	class	II	(D,	K	and	N)
APG6_N	PF17675.1	gi|289596026|ref|YP_003482722.1|	-	0.14	12.7	6.6	0.34	11.5	6.6	1.6	1	0	0	1	1	1	0	Apg6	coiled-coil	region
CENP-H	PF05837.12	gi|289596026|ref|YP_003482722.1|	-	0.16	12.4	5.6	0.36	11.3	5.6	1.5	1	0	0	1	1	1	0	Centromere	protein	H	(CENP-H)
DUF4337	PF14235.6	gi|289596026|ref|YP_003482722.1|	-	0.17	12.0	1.3	0.29	11.2	1.3	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4337)
TPR_MLP1_2	PF07926.12	gi|289596026|ref|YP_003482722.1|	-	0.18	11.9	6.2	0.38	10.8	6.2	1.4	1	0	0	1	1	1	0	TPR/MLP1/MLP2-like	protein
DivIC	PF04977.15	gi|289596026|ref|YP_003482722.1|	-	0.28	11.0	10.5	0.031	14.0	4.4	2.6	2	1	1	3	3	2	0	Septum	formation	initiator
GARP	PF16731.5	gi|289596026|ref|YP_003482722.1|	-	0.32	10.7	1.2	0.56	9.9	0.9	1.5	1	1	0	1	1	1	0	Glutamic	acid/alanine-rich	protein	of	Trypanosoma
GAS	PF13851.6	gi|289596026|ref|YP_003482722.1|	-	0.34	10.3	11.4	0.85	8.9	11.4	1.6	1	0	0	1	1	1	0	Growth-arrest	specific	micro-tubule	binding
ZapB	PF06005.12	gi|289596026|ref|YP_003482722.1|	-	0.38	11.2	9.1	0.26	11.7	2.0	2.6	2	0	0	2	2	2	0	Cell	division	protein	ZapB
DUF4140	PF13600.6	gi|289596026|ref|YP_003482722.1|	-	0.5	10.8	2.8	1.1	9.7	2.8	1.6	1	1	0	1	1	1	0	N-terminal	domain	of	unknown	function	(DUF4140)
GLYCAM-1	PF05242.11	gi|289596026|ref|YP_003482722.1|	-	2	8.5	5.6	0.88	9.7	1.8	2.0	2	0	0	2	2	2	0	Glycosylation-dependent	cell	adhesion	molecule	1	(GlyCAM-1)
BST2	PF16716.5	gi|289596026|ref|YP_003482722.1|	-	3	8.5	4.7	9.8	6.8	4.5	2.0	1	1	1	2	2	2	0	Bone	marrow	stromal	antigen	2
BLOC1_2	PF10046.9	gi|289596026|ref|YP_003482722.1|	-	4.3	7.7	8.3	0.87	9.9	4.4	1.9	2	0	0	2	2	1	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
TMF_DNA_bd	PF12329.8	gi|289596026|ref|YP_003482722.1|	-	5.5	7.1	16.7	0.17	11.9	10.4	1.8	2	0	0	2	2	1	0	TATA	element	modulatory	factor	1	DNA	binding
DUF1947	PF09183.10	gi|289596026|ref|YP_003482722.1|	-	7	7.0	10.5	0.97	9.8	3.5	3.2	3	1	1	4	4	3	0	Domain	of	unknown	function	(DUF1947)
Carb_kinase	PF01256.17	gi|289596027|ref|YP_003482723.1|	-	1.1e-51	175.6	0.0	1.8e-51	175.0	0.0	1.3	1	0	0	1	1	1	1	Carbohydrate	kinase
YjeF_N	PF03853.15	gi|289596027|ref|YP_003482723.1|	-	6.4e-47	159.6	0.1	1.2e-46	158.7	0.1	1.5	1	0	0	1	1	1	1	YjeF-related	protein	N-terminus
HK	PF02110.15	gi|289596027|ref|YP_003482723.1|	-	5.1e-06	26.1	0.1	1e-05	25.0	0.1	1.5	1	1	0	1	1	1	1	Hydroxyethylthiazole	kinase	family
Phos_pyr_kin	PF08543.12	gi|289596027|ref|YP_003482723.1|	-	0.0012	18.2	0.0	0.002	17.5	0.0	1.3	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
PfkB	PF00294.24	gi|289596027|ref|YP_003482723.1|	-	0.094	12.0	0.0	0.15	11.3	0.0	1.3	1	0	0	1	1	1	0	pfkB	family	carbohydrate	kinase
Acetyltransf_1	PF00583.25	gi|289596028|ref|YP_003482724.1|	-	5.5e-19	68.5	0.0	6.3e-19	68.3	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.7	gi|289596028|ref|YP_003482724.1|	-	2.2e-15	56.7	0.0	3e-15	56.3	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.7	gi|289596028|ref|YP_003482724.1|	-	2.2e-13	50.4	0.2	3e-13	50.0	0.2	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.10	gi|289596028|ref|YP_003482724.1|	-	7.2e-08	32.3	0.0	1.5e-07	31.3	0.0	1.5	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_9	PF13527.7	gi|289596028|ref|YP_003482724.1|	-	3e-07	30.6	0.0	5.4e-07	29.7	0.0	1.4	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.6	gi|289596028|ref|YP_003482724.1|	-	2.8e-06	27.4	0.0	4.5e-06	26.7	0.0	1.3	1	0	0	1	1	1	1	GCN5-related	N-acetyl-transferase
Acetyltransf_15	PF17013.5	gi|289596028|ref|YP_003482724.1|	-	4.3e-06	26.3	0.3	5.6e-06	26.0	0.3	1.2	1	0	0	1	1	1	1	Putative	acetyl-transferase
Acetyltransf_3	PF13302.7	gi|289596028|ref|YP_003482724.1|	-	0.00024	21.8	0.0	0.00029	21.5	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
PanZ	PF12568.8	gi|289596028|ref|YP_003482724.1|	-	0.0022	17.7	0.0	0.0064	16.2	0.0	1.7	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain,	PanZ
Acetyltransf_4	PF13420.7	gi|289596028|ref|YP_003482724.1|	-	0.0051	16.9	0.1	0.0054	16.9	0.1	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.6	gi|289596028|ref|YP_003482724.1|	-	0.022	14.4	0.0	0.034	13.8	0.0	1.3	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
Acetyltransf_6	PF13480.7	gi|289596028|ref|YP_003482724.1|	-	0.13	12.5	0.0	0.24	11.6	0.0	1.6	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
ADH_N	PF08240.12	gi|289596029|ref|YP_003482725.1|	-	3.7e-35	120.1	0.5	6.5e-35	119.3	0.3	1.5	2	0	0	2	2	2	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.26	gi|289596029|ref|YP_003482725.1|	-	0.00017	21.6	0.0	0.00034	20.6	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
2-Hacid_dh_C	PF02826.19	gi|289596029|ref|YP_003482725.1|	-	0.041	13.3	0.0	0.066	12.6	0.0	1.2	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
HhH-GPD	PF00730.25	gi|289596030|ref|YP_003482726.1|	-	9.2e-11	42.2	0.0	1.5e-10	41.5	0.0	1.3	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
Ribo_biogen_C	PF04034.13	gi|289596032|ref|YP_003482728.1|	-	1.9e-44	150.5	0.0	2.5e-44	150.0	0.0	1.2	1	0	0	1	1	1	1	Ribosome	biogenesis	protein,	C-terminal
RLI	PF04068.15	gi|289596032|ref|YP_003482728.1|	-	1.8e-10	40.5	0.0	2.6e-10	39.9	0.0	1.2	1	0	0	1	1	1	1	Possible	Fer4-like	domain	in	RNase	L	inhibitor,	RLI
DTW	PF03942.15	gi|289596032|ref|YP_003482728.1|	-	0.011	15.5	0.0	0.042	13.6	0.0	1.8	1	1	0	1	1	1	0	DTW	domain
PEP-utilizers_C	PF02896.18	gi|289596033|ref|YP_003482729.1|	-	4.2e-94	315.0	1.4	1.1e-93	313.6	1.4	1.7	1	1	0	1	1	1	1	PEP-utilising	enzyme,	TIM	barrel	domain
PPDK_N	PF01326.19	gi|289596033|ref|YP_003482729.1|	-	1.9e-62	211.5	0.1	6.3e-49	167.0	0.0	3.3	1	1	1	2	2	2	2	Pyruvate	phosphate	dikinase,	PEP/pyruvate	binding	domain
PEP-utilizers	PF00391.23	gi|289596033|ref|YP_003482729.1|	-	4.4e-30	103.2	0.6	9.2e-30	102.2	0.6	1.6	1	0	0	1	1	1	1	PEP-utilising	enzyme,	mobile	domain
D5_N	PF08706.11	gi|289596033|ref|YP_003482729.1|	-	0.23	11.7	0.5	77	3.5	0.0	3.3	3	0	0	3	3	3	0	D5	N	terminal	like
DUF3452	PF11934.8	gi|289596033|ref|YP_003482729.1|	-	0.25	10.9	0.4	4.8	6.7	0.0	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3452)
Laminin_II	PF06009.12	gi|289596033|ref|YP_003482729.1|	-	0.83	9.7	9.7	1.2	9.1	0.0	3.6	4	0	0	4	4	4	0	Laminin	Domain	II
PEP-utilisers_N	PF05524.13	gi|289596033|ref|YP_003482729.1|	-	1.2	9.3	4.0	3.2	7.9	0.0	3.1	3	1	0	3	3	3	0	PEP-utilising	enzyme,	N-terminal
IlvGEDA_leader	PF08046.11	gi|289596034|ref|YP_003482730.1|	-	2.8	7.5	5.6	2.3	7.7	2.8	2.0	2	0	0	2	2	2	0	IlvGEDA	operon	leader	peptide
ECF_trnsprt	PF12822.7	gi|289596036|ref|YP_003482732.1|	-	0.006	16.7	1.0	0.006	16.7	1.0	1.9	2	0	0	2	2	2	1	ECF	transporter,	substrate-specific	component
DUF4199	PF13858.6	gi|289596036|ref|YP_003482732.1|	-	0.042	14.3	2.0	0.072	13.5	0.2	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4199)
XK-related	PF09815.9	gi|289596036|ref|YP_003482732.1|	-	0.047	12.7	2.5	0.084	11.9	2.5	1.3	1	0	0	1	1	1	0	XK-related	protein
Cytomega_UL20A	PF05984.12	gi|289596036|ref|YP_003482732.1|	-	1.2	9.5	7.2	0.26	11.6	1.1	2.7	1	1	2	3	3	3	0	Cytomegalovirus	UL20A	protein
PLDc_N	PF13396.6	gi|289596036|ref|YP_003482732.1|	-	1.3	9.1	14.6	5.1	7.1	14.6	2.1	1	1	0	1	1	1	0	Phospholipase_D-nuclease	N-terminal
zf-LITAF-like	PF10601.9	gi|289596036|ref|YP_003482732.1|	-	1.6	9.1	0.0	1.6	9.1	0.0	2.4	2	1	1	3	3	3	0	LITAF-like	zinc	ribbon	domain
QRPTase_C	PF01729.19	gi|289596037|ref|YP_003482733.1|	-	5.3e-52	176.0	0.6	7.2e-52	175.6	0.6	1.2	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
QRPTase_N	PF02749.16	gi|289596037|ref|YP_003482733.1|	-	4.6e-24	84.3	0.4	1.1e-23	83.0	0.0	1.8	2	0	0	2	2	2	1	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
Ribul_P_3_epim	PF00834.19	gi|289596037|ref|YP_003482733.1|	-	0.048	13.0	0.0	0.11	11.9	0.0	1.7	1	1	0	1	1	1	0	Ribulose-phosphate	3	epimerase	family
DNA_pol_D_N	PF18018.1	gi|289596037|ref|YP_003482733.1|	-	0.13	12.4	0.2	0.25	11.4	0.0	1.7	2	1	0	2	2	2	0	DNA	polymerase	delta	subunit	OB-fold	domain
NadA	PF02445.16	gi|289596038|ref|YP_003482734.1|	-	7.9e-106	353.6	2.0	9.3e-106	353.3	2.0	1.0	1	0	0	1	1	1	1	Quinolinate	synthetase	A	protein
GPI	PF06560.11	gi|289596038|ref|YP_003482734.1|	-	0.027	13.7	0.1	0.048	12.9	0.1	1.4	1	0	0	1	1	1	0	Glucose-6-phosphate	isomerase	(GPI)
LysR_substrate	PF03466.20	gi|289596038|ref|YP_003482734.1|	-	0.081	12.3	0.0	0.14	11.5	0.0	1.3	1	0	0	1	1	1	0	LysR	substrate	binding	domain
Asparaginase	PF00710.20	gi|289596038|ref|YP_003482734.1|	-	0.088	12.4	0.0	0.28	10.7	0.0	1.8	2	0	0	2	2	2	0	Asparaginase,	N-terminal
XPG_I	PF00867.18	gi|289596038|ref|YP_003482734.1|	-	0.098	13.0	0.1	0.46	10.9	0.0	2.1	2	0	0	2	2	2	0	XPG	I-region
DUF108	PF01958.18	gi|289596039|ref|YP_003482735.1|	-	1.7e-30	105.2	0.0	2.7e-30	104.6	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF108
NAD_binding_3	PF03447.16	gi|289596039|ref|YP_003482735.1|	-	9.1e-17	61.8	0.1	9.4e-16	58.5	0.0	2.3	2	1	0	2	2	2	1	Homoserine	dehydrogenase,	NAD	binding	domain
DapB_N	PF01113.20	gi|289596039|ref|YP_003482735.1|	-	9.3e-05	22.5	1.4	0.00024	21.2	0.5	2.1	2	1	0	2	2	2	1	Dihydrodipicolinate	reductase,	N-terminus
F420_oxidored	PF03807.17	gi|289596039|ref|YP_003482735.1|	-	0.00014	22.4	2.0	0.0013	19.3	2.0	2.3	1	1	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
2-Hacid_dh_C	PF02826.19	gi|289596039|ref|YP_003482735.1|	-	0.00016	21.1	0.0	0.00033	20.1	0.0	1.5	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
GFO_IDH_MocA	PF01408.22	gi|289596039|ref|YP_003482735.1|	-	0.038	14.8	0.5	0.087	13.7	0.5	1.7	1	1	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
NMT1_2	PF13379.6	gi|289596040|ref|YP_003482736.1|	-	4.6e-07	29.8	0.0	2.7e-06	27.3	0.0	1.9	1	1	1	2	2	2	1	NMT1-like	family
DUF3834	PF12916.7	gi|289596040|ref|YP_003482736.1|	-	0.00013	21.3	0.0	0.0002	20.7	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3834)
HTH_24	PF13412.6	gi|289596040|ref|YP_003482736.1|	-	0.00034	20.1	0.1	0.00075	19.0	0.1	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.7	gi|289596040|ref|YP_003482736.1|	-	0.0011	18.8	0.0	0.0056	16.5	0.0	2.0	2	0	0	2	2	2	1	MarR	family
MarR	PF01047.22	gi|289596040|ref|YP_003482736.1|	-	0.0014	18.5	0.1	0.0028	17.5	0.1	1.5	1	0	0	1	1	1	1	MarR	family
NMT1	PF09084.11	gi|289596040|ref|YP_003482736.1|	-	0.0018	18.2	0.0	0.011	15.6	0.0	2.0	2	0	0	2	2	2	1	NMT1/THI5	like
SBP_bac_3	PF00497.20	gi|289596040|ref|YP_003482736.1|	-	0.0023	17.4	0.0	0.018	14.5	0.0	2.1	2	0	0	2	2	2	1	Bacterial	extracellular	solute-binding	proteins,	family	3
HTH_23	PF13384.6	gi|289596040|ref|YP_003482736.1|	-	0.0027	17.5	0.0	0.0079	16.0	0.0	1.9	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_11	PF08279.12	gi|289596040|ref|YP_003482736.1|	-	0.006	16.5	0.2	0.014	15.3	0.2	1.6	1	0	0	1	1	1	1	HTH	domain
HTH_Crp_2	PF13545.6	gi|289596040|ref|YP_003482736.1|	-	0.027	14.4	0.0	0.06	13.3	0.0	1.5	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
OpuAC	PF04069.12	gi|289596040|ref|YP_003482736.1|	-	0.041	13.5	0.0	0.12	11.9	0.0	1.8	1	1	0	1	1	1	0	Substrate	binding	domain	of	ABC-type	glycine	betaine	transport	system
HTH_3	PF01381.22	gi|289596040|ref|YP_003482736.1|	-	0.052	13.6	0.0	0.15	12.1	0.0	1.8	1	0	0	1	1	1	0	Helix-turn-helix
HTH_36	PF13730.6	gi|289596040|ref|YP_003482736.1|	-	0.061	13.3	0.1	0.15	12.1	0.1	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
PuR_N	PF09182.10	gi|289596040|ref|YP_003482736.1|	-	0.078	12.9	0.0	0.19	11.7	0.0	1.6	1	0	0	1	1	1	0	Bacterial	purine	repressor,	N-terminal
Penicillinase_R	PF03965.16	gi|289596040|ref|YP_003482736.1|	-	0.079	13.3	0.1	0.14	12.5	0.1	1.4	1	0	0	1	1	1	0	Penicillinase	repressor
B-block_TFIIIC	PF04182.12	gi|289596040|ref|YP_003482736.1|	-	0.12	12.6	0.0	0.22	11.7	0.0	1.4	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
Skp1	PF01466.19	gi|289596040|ref|YP_003482736.1|	-	0.15	12.2	0.5	0.32	11.1	0.5	1.5	1	0	0	1	1	1	0	Skp1	family,	dimerisation	domain
HTH_AsnC-type	PF13404.6	gi|289596041|ref|YP_003482737.1|	-	8.9e-27	92.7	0.0	9.3e-13	47.8	0.0	2.3	2	0	0	2	2	2	2	AsnC-type	helix-turn-helix	domain
HTH_24	PF13412.6	gi|289596041|ref|YP_003482737.1|	-	2.7e-21	74.9	0.0	1.8e-10	40.2	0.0	2.4	2	0	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
HTH_23	PF13384.6	gi|289596041|ref|YP_003482737.1|	-	1.8e-08	33.9	0.7	0.0011	18.7	0.1	2.5	2	0	0	2	2	2	2	Homeodomain-like	domain
HTH_11	PF08279.12	gi|289596041|ref|YP_003482737.1|	-	1.2e-07	31.6	0.1	0.00024	21.0	0.0	2.9	2	0	0	2	2	2	2	HTH	domain
HTH_28	PF13518.6	gi|289596041|ref|YP_003482737.1|	-	1.2e-07	31.7	0.3	0.023	14.8	0.0	2.4	2	0	0	2	2	2	2	Helix-turn-helix	domain
HTH_20	PF12840.7	gi|289596041|ref|YP_003482737.1|	-	6.6e-07	29.3	0.0	0.0067	16.5	0.0	2.3	2	0	0	2	2	2	2	Helix-turn-helix	domain
MarR	PF01047.22	gi|289596041|ref|YP_003482737.1|	-	9.1e-07	28.7	0.0	2.2e-05	24.3	0.0	2.2	2	0	0	2	2	2	1	MarR	family
TrmB	PF01978.19	gi|289596041|ref|YP_003482737.1|	-	1.2e-06	28.3	0.0	0.0051	16.7	0.0	2.5	2	0	0	2	2	2	2	Sugar-specific	transcriptional	regulator	TrmB
HTH_5	PF01022.20	gi|289596041|ref|YP_003482737.1|	-	1.1e-05	25.2	0.0	0.22	11.4	0.0	2.4	2	0	0	2	2	2	2	Bacterial	regulatory	protein,	arsR	family
MarR_2	PF12802.7	gi|289596041|ref|YP_003482737.1|	-	7.8e-05	22.5	0.0	0.21	11.5	0.0	2.3	2	0	0	2	2	2	2	MarR	family
Mga	PF05043.13	gi|289596041|ref|YP_003482737.1|	-	0.00027	21.5	0.0	0.034	14.7	0.0	3.2	3	0	0	3	3	3	1	Mga	helix-turn-helix	domain
HTH_1	PF00126.27	gi|289596041|ref|YP_003482737.1|	-	0.00073	19.4	0.0	1.4	8.9	0.0	2.4	2	0	0	2	2	2	2	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
HTH_Tnp_ISL3	PF13542.6	gi|289596041|ref|YP_003482737.1|	-	0.00078	18.8	0.0	0.0029	17.0	0.0	1.9	2	0	0	2	2	2	1	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_7	PF02796.15	gi|289596041|ref|YP_003482737.1|	-	0.00081	19.4	0.0	0.29	11.2	0.0	2.6	2	0	0	2	2	2	1	Helix-turn-helix	domain	of	resolvase
HTH_38	PF13936.6	gi|289596041|ref|YP_003482737.1|	-	0.0012	18.6	0.2	0.93	9.3	0.0	2.8	3	0	0	3	3	3	1	Helix-turn-helix	domain
LacI	PF00356.21	gi|289596041|ref|YP_003482737.1|	-	0.0013	18.5	1.3	0.032	14.0	0.0	3.1	3	0	0	3	3	3	1	Bacterial	regulatory	proteins,	lacI	family
HTH_Tnp_1_2	PF13022.6	gi|289596041|ref|YP_003482737.1|	-	0.0042	17.2	0.1	0.021	15.0	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	of	insertion	element	transposase
HTH_10	PF04967.12	gi|289596041|ref|YP_003482737.1|	-	0.0061	16.3	0.0	2.9	7.7	0.0	2.4	2	0	0	2	2	2	1	HTH	DNA	binding	domain
RepL	PF05732.11	gi|289596041|ref|YP_003482737.1|	-	0.0079	15.6	0.0	0.79	9.1	0.0	2.4	2	0	0	2	2	2	1	Firmicute	plasmid	replication	protein	(RepL)
HTH_IclR	PF09339.10	gi|289596041|ref|YP_003482737.1|	-	0.009	15.8	0.0	0.12	12.2	0.0	2.2	2	0	0	2	2	2	1	IclR	helix-turn-helix	domain
Sigma70_r4	PF04545.16	gi|289596041|ref|YP_003482737.1|	-	0.0092	15.5	0.0	0.17	11.4	0.0	2.4	2	0	0	2	2	2	1	Sigma-70,	region	4
Sigma70_r4_2	PF08281.12	gi|289596041|ref|YP_003482737.1|	-	0.011	15.3	0.0	2.2	8.0	0.0	2.8	3	0	0	3	3	2	0	Sigma-70,	region	4
TetR_N	PF00440.23	gi|289596041|ref|YP_003482737.1|	-	0.013	15.3	0.0	2.7	7.8	0.0	2.6	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	tetR	family
HTH_Crp_2	PF13545.6	gi|289596041|ref|YP_003482737.1|	-	0.02	14.8	0.0	3.2	7.8	0.0	2.3	2	0	0	2	2	2	0	Crp-like	helix-turn-helix	domain
HTH_DeoR	PF08220.12	gi|289596041|ref|YP_003482737.1|	-	0.073	12.8	0.0	7.6	6.4	0.0	2.4	2	0	0	2	2	2	0	DeoR-like	helix-turn-helix	domain
Sigma70_ECF	PF07638.11	gi|289596041|ref|YP_003482737.1|	-	0.092	12.6	0.2	0.68	9.8	0.1	2.1	2	0	0	2	2	2	0	ECF	sigma	factor
LexA_DNA_bind	PF01726.16	gi|289596041|ref|YP_003482737.1|	-	0.11	12.3	0.0	2.1	8.2	0.0	2.4	2	0	0	2	2	2	0	LexA	DNA	binding	domain
Rrf2	PF02082.20	gi|289596041|ref|YP_003482737.1|	-	0.12	12.7	0.0	10	6.5	0.0	2.5	2	0	0	2	2	2	0	Transcriptional	regulator
LZ_Tnp_IS481	PF13011.6	gi|289596041|ref|YP_003482737.1|	-	0.16	12.5	0.1	2.6	8.6	0.0	2.2	2	0	0	2	2	2	0	leucine-zipper	of	insertion	element	IS481
HhH-GPD	PF00730.25	gi|289596043|ref|YP_003482739.1|	-	1.3e-25	90.0	0.0	1.8e-25	89.4	0.0	1.3	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
HHH	PF00633.23	gi|289596043|ref|YP_003482739.1|	-	3.9e-10	39.1	0.0	1.2e-09	37.5	0.0	1.9	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_5	PF14520.6	gi|289596043|ref|YP_003482739.1|	-	0.0004	20.9	0.0	0.058	14.0	0.4	2.3	1	1	2	3	3	3	2	Helix-hairpin-helix	domain
DUF3798	PF12683.7	gi|289596043|ref|YP_003482739.1|	-	0.02	14.4	0.1	0.026	13.9	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3798)
IcmF_C	PF06744.12	gi|289596043|ref|YP_003482739.1|	-	0.042	13.4	0.0	0.058	13.0	0.0	1.2	1	0	0	1	1	1	0	Type	VI	secretion	protein	IcmF	C-terminal
EndIII_4Fe-2S	PF10576.9	gi|289596043|ref|YP_003482739.1|	-	0.071	13.5	7.8	0.11	12.8	7.8	1.3	1	0	0	1	1	1	0	Iron-sulfur	binding	domain	of	endonuclease	III
DUF2400	PF09674.10	gi|289596043|ref|YP_003482739.1|	-	0.13	12.3	0.0	0.22	11.5	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2400)
HD_3	PF13023.6	gi|289596046|ref|YP_003482742.1|	-	4.1e-30	104.9	0.0	4.9e-30	104.6	0.0	1.1	1	0	0	1	1	1	1	HD	domain
HD_2	PF12917.7	gi|289596046|ref|YP_003482742.1|	-	3.1e-10	40.1	0.0	3.8e-10	39.8	0.0	1.3	1	1	0	1	1	1	1	HD	containing	hydrolase-like	enzyme
HD	PF01966.22	gi|289596046|ref|YP_003482742.1|	-	5.3e-05	23.4	0.3	7.2e-05	23.0	0.3	1.3	1	1	0	1	1	1	1	HD	domain
Octopine_DH	PF02317.17	gi|289596046|ref|YP_003482742.1|	-	0.14	12.2	0.1	0.32	11.1	0.1	1.5	1	1	1	2	2	2	0	NAD/NADP	octopine/nopaline	dehydrogenase,	alpha-helical	domain
TatD_DNase	PF01026.21	gi|289596047|ref|YP_003482743.1|	-	9e-23	81.0	0.0	1.2e-22	80.5	0.0	1.1	1	0	0	1	1	1	1	TatD	related	DNase
adh_short	PF00106.25	gi|289596049|ref|YP_003482745.1|	-	1.1e-31	109.9	0.0	1.6e-31	109.3	0.0	1.2	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.6	gi|289596049|ref|YP_003482745.1|	-	2.6e-20	73.0	0.0	3.4e-20	72.6	0.0	1.2	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
Epimerase	PF01370.21	gi|289596049|ref|YP_003482745.1|	-	7.4e-09	35.4	0.3	2.7e-08	33.6	0.3	1.9	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
KR	PF08659.10	gi|289596049|ref|YP_003482745.1|	-	5.4e-07	29.7	0.0	8.5e-07	29.1	0.0	1.2	1	0	0	1	1	1	1	KR	domain
RmlD_sub_bind	PF04321.17	gi|289596049|ref|YP_003482745.1|	-	0.00096	18.3	0.0	0.043	12.9	0.0	2.0	2	0	0	2	2	2	1	RmlD	substrate	binding	domain
TrkA_N	PF02254.18	gi|289596049|ref|YP_003482745.1|	-	0.0028	17.9	0.0	0.0067	16.7	0.0	1.6	1	0	0	1	1	1	1	TrkA-N	domain
Glyco_tran_WecB	PF03808.13	gi|289596049|ref|YP_003482745.1|	-	0.0046	16.9	0.1	0.89	9.5	0.0	2.1	1	1	0	2	2	2	1	Glycosyl	transferase	WecB/TagA/CpsF	family
NAD_binding_10	PF13460.6	gi|289596049|ref|YP_003482745.1|	-	0.0055	16.6	0.0	0.0068	16.3	0.0	1.5	1	1	0	1	1	1	1	NAD(P)H-binding
Sacchrp_dh_NADP	PF03435.18	gi|289596049|ref|YP_003482745.1|	-	0.027	14.8	0.0	0.24	11.7	0.0	2.0	2	0	0	2	2	2	0	Saccharopine	dehydrogenase	NADP	binding	domain
F420_oxidored	PF03807.17	gi|289596049|ref|YP_003482745.1|	-	0.053	14.1	0.3	0.15	12.6	0.1	1.8	2	0	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
Glyco_trans_4_2	PF13477.6	gi|289596049|ref|YP_003482745.1|	-	0.079	13.0	0.0	0.23	11.5	0.0	1.8	1	1	0	1	1	1	0	Glycosyl	transferase	4-like
DUF3801	PF12687.7	gi|289596049|ref|YP_003482745.1|	-	0.12	12.4	0.5	0.33	11.0	0.5	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3801)
DUF5611	PF18446.1	gi|289596050|ref|YP_003482746.1|	-	5.4e-30	104.3	1.8	5.9e-30	104.2	1.8	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF5611)
Fer4	PF00037.27	gi|289596051|ref|YP_003482747.1|	-	1.8e-10	40.2	18.1	2.8e-05	23.7	4.1	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|289596051|ref|YP_003482747.1|	-	5.4e-09	36.9	6.8	0.0011	19.9	1.1	2.4	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_7	PF12838.7	gi|289596051|ref|YP_003482747.1|	-	1.3e-08	35.2	10.9	3e-08	34.1	10.8	1.7	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|289596051|ref|YP_003482747.1|	-	3.8e-08	33.4	24.9	4.1e-05	23.6	13.9	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|289596051|ref|YP_003482747.1|	-	7e-08	32.9	4.6	0.00075	20.0	0.2	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|289596051|ref|YP_003482747.1|	-	2.2e-07	30.9	12.4	4.2e-06	26.8	13.6	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|289596051|ref|YP_003482747.1|	-	1.3e-06	28.4	10.5	3.2e-06	27.2	10.7	1.5	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|289596051|ref|YP_003482747.1|	-	9.4e-06	26.0	9.2	0.0029	18.0	12.9	2.1	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|289596051|ref|YP_003482747.1|	-	4.7e-05	23.2	17.7	0.0023	17.9	3.2	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|289596051|ref|YP_003482747.1|	-	6.7e-05	22.8	16.6	0.002	18.1	3.9	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|289596051|ref|YP_003482747.1|	-	0.00077	19.8	14.0	0.092	13.3	1.8	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|289596051|ref|YP_003482747.1|	-	0.014	15.6	9.6	0.19	11.9	1.3	2.2	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|289596051|ref|YP_003482747.1|	-	0.049	14.6	5.1	0.049	14.6	5.1	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|289596051|ref|YP_003482747.1|	-	0.29	11.7	15.0	0.16	12.5	3.2	2.4	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_15	PF13459.6	gi|289596051|ref|YP_003482747.1|	-	1.1	10.1	10.1	0.94	10.3	0.3	2.5	2	1	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_22	PF17179.4	gi|289596051|ref|YP_003482747.1|	-	1.2	10.1	15.8	1.2	10.0	2.2	2.3	1	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Complex1_49kDa	PF00346.19	gi|289596052|ref|YP_003482748.1|	-	1.2e-76	257.4	0.0	6.2e-74	248.5	0.0	2.1	1	1	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase,	49	Kd	subunit
NiFeSe_Hases	PF00374.19	gi|289596052|ref|YP_003482748.1|	-	3.8e-05	22.8	0.0	5.8e-05	22.2	0.0	1.2	1	0	0	1	1	1	1	Nickel-dependent	hydrogenase
Complex1_30kDa	PF00329.19	gi|289596053|ref|YP_003482749.1|	-	8.3e-28	97.5	0.1	1.1e-27	97.1	0.1	1.1	1	0	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase,	30	Kd	subunit
Oxidored_q6	PF01058.22	gi|289596054|ref|YP_003482750.1|	-	8.8e-24	83.8	0.0	1.1e-23	83.5	0.0	1.1	1	0	0	1	1	1	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
NADHdh	PF00146.21	gi|289596055|ref|YP_003482751.1|	-	7.2e-56	189.7	24.0	9.6e-56	189.3	24.0	1.0	1	0	0	1	1	1	1	NADH	dehydrogenase
Proton_antipo_M	PF00361.20	gi|289596056|ref|YP_003482752.1|	-	1.3e-49	169.0	29.1	1.3e-49	169.0	29.1	2.8	3	1	0	3	3	3	1	Proton-conducting	membrane	transporter
Proton_antipo_M	PF00361.20	gi|289596057|ref|YP_003482753.1|	-	8.7e-63	212.2	25.5	8.7e-63	212.2	25.5	2.2	2	1	1	3	3	3	1	Proton-conducting	membrane	transporter
NADHdeh_related	PF10125.9	gi|289596057|ref|YP_003482753.1|	-	5.8e-06	25.8	9.7	5.8e-06	25.8	9.7	3.3	2	2	1	3	3	3	2	NADH	dehydrogenase	I,	subunit	N	related	protein
PEN-2	PF10251.9	gi|289596057|ref|YP_003482753.1|	-	0.036	14.5	2.5	0.3	11.5	0.7	2.7	2	0	0	2	2	2	0	Presenilin	enhancer-2	subunit	of	gamma	secretase
FixS	PF03597.15	gi|289596057|ref|YP_003482753.1|	-	0.71	9.6	0.1	0.71	9.6	0.1	5.2	6	0	0	6	6	6	0	Cytochrome	oxidase	maturation	protein	cbb3-type
Oxidored_q2	PF00420.24	gi|289596058|ref|YP_003482754.1|	-	4.2e-32	109.9	3.4	4.5e-32	109.8	3.4	1.0	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
DUF2108	PF09881.9	gi|289596058|ref|YP_003482754.1|	-	0.035	14.1	5.6	0.035	14.1	5.6	1.9	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2108)
SKG6	PF08693.10	gi|289596058|ref|YP_003482754.1|	-	0.24	10.8	7.0	0.61	9.5	0.8	2.5	2	0	0	2	2	2	0	Transmembrane	alpha-helix	domain
MnhB	PF04039.13	gi|289596059|ref|YP_003482755.1|	-	4.5e-22	78.7	13.9	4.5e-22	78.7	13.9	2.5	2	1	1	3	3	3	1	Domain	related	to	MnhB	subunit	of	Na+/H+	antiporter
DUF2105	PF09878.9	gi|289596059|ref|YP_003482755.1|	-	0.009	15.8	4.2	0.018	14.8	4.0	1.5	1	1	0	1	1	1	1	Predicted	membrane	protein	(DUF2105)
Aim19	PF10315.9	gi|289596059|ref|YP_003482755.1|	-	0.0094	16.2	0.3	0.021	15.1	0.3	1.8	1	1	0	1	1	1	1	Altered	inheritance	of	mitochondria	protein	19
DUF4040	PF13244.6	gi|289596060|ref|YP_003482756.1|	-	1.4e-19	70.0	10.2	1.4e-19	70.0	10.2	1.3	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4040)
TspO_MBR	PF03073.15	gi|289596060|ref|YP_003482756.1|	-	0.032	14.3	6.6	0.036	14.1	6.6	1.0	1	0	0	1	1	1	0	TspO/MBR	family
B12D	PF06522.11	gi|289596060|ref|YP_003482756.1|	-	0.69	9.7	4.7	1.8	8.4	0.3	2.4	1	1	1	2	2	2	0	NADH-ubiquinone	reductase	complex	1	MLRQ	subunit
CreD	PF06123.12	gi|289596060|ref|YP_003482756.1|	-	0.87	8.3	5.9	0.91	8.2	5.9	1.0	1	0	0	1	1	1	0	Inner	membrane	protein	CreD
DUF2070	PF09843.9	gi|289596060|ref|YP_003482756.1|	-	0.91	7.7	10.8	0.95	7.7	10.8	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
IncE	PF17627.2	gi|289596060|ref|YP_003482756.1|	-	1.4	9.0	6.9	1.8	8.6	6.9	1.2	1	0	0	1	1	1	0	Inclusion	membrane	protein	E
Herpes_LMP1	PF05297.11	gi|289596060|ref|YP_003482756.1|	-	9.6	5.3	7.1	9.6	5.3	7.1	1.1	1	0	0	1	1	1	0	Herpesvirus	latent	membrane	protein	1	(LMP1)
PhaG_MnhG_YufB	PF03334.14	gi|289596061|ref|YP_003482757.1|	-	3.3e-24	84.9	7.0	4.4e-24	84.5	7.0	1.2	1	0	0	1	1	1	1	Na+/H+	antiporter	subunit
DUF1707	PF08044.11	gi|289596061|ref|YP_003482757.1|	-	0.07	13.2	0.0	0.11	12.6	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1707)
DUF3040	PF11239.8	gi|289596061|ref|YP_003482757.1|	-	9.5	6.6	6.6	1	9.7	1.3	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3040)
MrpF_PhaF	PF04066.13	gi|289596062|ref|YP_003482758.1|	-	2.6e-18	66.2	8.5	2.6e-18	66.2	8.5	2.0	2	0	0	2	2	2	1	Multiple	resistance	and	pH	regulation	protein	F	(MrpF	/	PhaF)
DUF2633	PF11119.8	gi|289596062|ref|YP_003482758.1|	-	0.3	11.0	2.3	0.51	10.3	2.3	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2633)
DUF2070	PF09843.9	gi|289596062|ref|YP_003482758.1|	-	0.89	7.8	8.5	1	7.5	8.5	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
TssN	PF17555.2	gi|289596062|ref|YP_003482758.1|	-	0.97	8.8	5.8	1.2	8.4	5.8	1.1	1	0	0	1	1	1	0	Type	VI	secretion	system,	TssN
DUF5326	PF17260.2	gi|289596062|ref|YP_003482758.1|	-	5.2	7.3	7.9	7.6	6.8	4.8	2.0	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5326)
MNHE	PF01899.16	gi|289596063|ref|YP_003482759.1|	-	1.5e-45	154.5	0.0	1.7e-45	154.3	0.0	1.0	1	0	0	1	1	1	1	Na+/H+	ion	antiporter	subunit
ThrE	PF06738.12	gi|289596063|ref|YP_003482759.1|	-	0.11	11.9	1.5	0.3	10.4	1.5	1.7	1	1	0	1	1	1	0	Putative	threonine/serine	exporter
BLOC1_2	PF10046.9	gi|289596064|ref|YP_003482760.1|	-	0.65	10.3	2.7	44	4.5	0.0	3.7	4	0	0	4	4	4	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
zf-C4_ClpX	PF06689.13	gi|289596065|ref|YP_003482761.1|	-	0.0078	16.1	0.7	0.013	15.4	0.7	1.3	1	0	0	1	1	1	1	ClpX	C4-type	zinc	finger
HNH	PF01844.23	gi|289596065|ref|YP_003482761.1|	-	0.018	15.2	5.1	0.15	12.3	5.1	2.2	1	1	0	1	1	1	0	HNH	endonuclease
DZR	PF12773.7	gi|289596065|ref|YP_003482761.1|	-	0.042	13.9	0.2	0.079	13.0	0.2	1.4	1	0	0	1	1	1	0	Double	zinc	ribbon
zinc_ribbon_10	PF10058.9	gi|289596065|ref|YP_003482761.1|	-	0.073	12.8	1.7	0.091	12.5	0.2	1.8	1	1	1	2	2	2	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
HNH_5	PF14279.6	gi|289596065|ref|YP_003482761.1|	-	0.078	12.8	2.2	0.27	11.1	2.2	1.8	1	1	0	1	1	1	0	HNH	endonuclease
zf-CCHC_4	PF14392.6	gi|289596065|ref|YP_003482761.1|	-	0.089	12.5	3.3	0.17	11.6	0.9	2.5	2	1	0	2	2	2	0	Zinc	knuckle
zf-DBF	PF07535.12	gi|289596065|ref|YP_003482761.1|	-	0.15	12.2	0.2	0.15	12.2	0.2	2.0	2	0	0	2	2	2	0	DBF	zinc	finger
HTH_23	PF13384.6	gi|289596066|ref|YP_003482762.1|	-	0.016	15.0	0.0	0.053	13.3	0.0	1.8	1	1	1	2	2	2	0	Homeodomain-like	domain
HTH_28	PF13518.6	gi|289596066|ref|YP_003482762.1|	-	0.017	15.2	0.0	0.041	14.0	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_7	PF02796.15	gi|289596066|ref|YP_003482762.1|	-	0.021	14.9	0.0	0.089	12.9	0.0	2.1	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	resolvase
GerE	PF00196.19	gi|289596066|ref|YP_003482762.1|	-	0.039	13.5	0.4	0.16	11.5	0.3	2.1	1	1	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
HTH_29	PF13551.6	gi|289596066|ref|YP_003482762.1|	-	0.073	13.1	0.0	0.16	12.0	0.0	1.6	1	0	0	1	1	1	0	Winged	helix-turn	helix
HTH_1	PF00126.27	gi|289596066|ref|YP_003482762.1|	-	0.092	12.7	0.0	0.21	11.6	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
HTH_Tnp_ISL3	PF13542.6	gi|289596066|ref|YP_003482762.1|	-	0.13	11.7	0.0	0.22	10.9	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_45	PF14947.6	gi|289596067|ref|YP_003482763.1|	-	0.0035	17.3	8.2	0.039	13.9	0.5	4.2	2	2	2	4	4	4	1	Winged	helix-turn-helix
MarR	PF01047.22	gi|289596067|ref|YP_003482763.1|	-	0.012	15.6	0.2	0.04	13.9	0.2	1.9	1	0	0	1	1	1	0	MarR	family
HTH_24	PF13412.6	gi|289596067|ref|YP_003482763.1|	-	0.013	15.1	1.3	0.018	14.6	0.2	1.9	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
HTH_34	PF13601.6	gi|289596067|ref|YP_003482763.1|	-	0.015	15.5	0.1	1.8	8.8	0.1	3.0	2	1	0	2	2	2	0	Winged	helix	DNA-binding	domain
HxlR	PF01638.17	gi|289596067|ref|YP_003482763.1|	-	0.027	14.3	0.2	0.092	12.6	0.2	2.0	1	1	0	1	1	1	0	HxlR-like	helix-turn-helix
Rrf2	PF02082.20	gi|289596067|ref|YP_003482763.1|	-	0.13	12.7	0.1	0.34	11.3	0.1	1.7	1	1	0	1	1	1	0	Transcriptional	regulator
Cas_Cas1	PF01867.16	gi|289596068|ref|YP_003482764.1|	-	1.2e-70	237.8	3.0	1.6e-70	237.5	3.0	1.1	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas1
N6_Mtase	PF02384.16	gi|289596069|ref|YP_003482765.1|	-	7.6e-15	55.0	0.0	2.7e-14	53.2	0.0	1.8	1	1	0	1	1	1	1	N-6	DNA	Methylase
Methyltransf_31	PF13847.6	gi|289596069|ref|YP_003482765.1|	-	0.00082	19.2	0.0	0.0036	17.1	0.0	2.2	2	1	0	2	2	2	1	Methyltransferase	domain
N6_N4_Mtase	PF01555.18	gi|289596069|ref|YP_003482765.1|	-	0.0013	18.5	2.1	0.061	13.0	0.0	3.1	3	0	0	3	3	3	1	DNA	methylase
UPF0020	PF01170.18	gi|289596069|ref|YP_003482765.1|	-	0.0017	18.1	0.2	0.0072	16.0	0.0	2.2	2	1	0	2	2	2	1	Putative	RNA	methylase	family	UPF0020
MTS	PF05175.14	gi|289596069|ref|YP_003482765.1|	-	0.12	11.9	0.1	4.4	6.8	0.0	3.0	2	1	0	2	2	2	0	Methyltransferase	small	domain
Methyltransf_25	PF13649.6	gi|289596069|ref|YP_003482765.1|	-	0.19	12.4	0.0	1.2	9.9	0.0	2.4	3	0	0	3	3	3	0	Methyltransferase	domain
Peptidase_S9	PF00326.21	gi|289596072|ref|YP_003482768.1|	-	1.7e-54	184.5	0.1	2.4e-54	184.0	0.1	1.2	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
AXE1	PF05448.12	gi|289596072|ref|YP_003482768.1|	-	6.6e-10	38.1	0.1	7.9e-07	28.0	0.0	3.2	2	1	0	2	2	2	1	Acetyl	xylan	esterase	(AXE1)
Abhydrolase_1	PF00561.20	gi|289596072|ref|YP_003482768.1|	-	3.2e-09	36.8	0.2	8.7e-07	28.8	0.1	2.4	1	1	1	2	2	2	2	alpha/beta	hydrolase	fold
Peptidase_S15	PF02129.18	gi|289596072|ref|YP_003482768.1|	-	1.9e-07	31.0	0.0	0.00051	19.7	0.0	2.2	2	0	0	2	2	2	2	X-Pro	dipeptidyl-peptidase	(S15	family)
DUF5050	PF16472.5	gi|289596072|ref|YP_003482768.1|	-	1.1e-06	28.1	0.2	0.00041	19.7	0.1	2.3	1	1	1	2	2	2	2	Domain	of	unknown	function	(DUF5050)
Hydrolase_4	PF12146.8	gi|289596072|ref|YP_003482768.1|	-	1.7e-06	27.5	0.2	0.058	12.6	0.1	2.2	2	0	0	2	2	2	2	Serine	aminopeptidase,	S33
DLH	PF01738.18	gi|289596072|ref|YP_003482768.1|	-	8.4e-06	25.5	0.0	5.7e-05	22.8	0.0	2.1	1	1	0	1	1	1	1	Dienelactone	hydrolase	family
DUF2920	PF11144.8	gi|289596072|ref|YP_003482768.1|	-	0.00015	21.1	0.1	0.15	11.2	0.0	2.3	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF2920)
PD40	PF07676.12	gi|289596072|ref|YP_003482768.1|	-	0.0022	17.9	1.2	1.4	8.9	0.1	4.2	5	0	0	5	5	4	1	WD40-like	Beta	Propeller	Repeat
Esterase	PF00756.20	gi|289596072|ref|YP_003482768.1|	-	0.0041	16.8	0.0	0.024	14.3	0.0	2.1	3	0	0	3	3	3	1	Putative	esterase
Abhydrolase_3	PF07859.13	gi|289596072|ref|YP_003482768.1|	-	0.0062	16.4	0.0	0.14	12.0	0.0	2.3	1	1	0	1	1	1	1	alpha/beta	hydrolase	fold
Gmad1	PF10647.9	gi|289596072|ref|YP_003482768.1|	-	0.0095	15.7	0.0	1.2	8.9	0.0	2.7	3	0	0	3	3	3	1	Lipoprotein	LpqB	beta-propeller	domain
Abhydrolase_6	PF12697.7	gi|289596072|ref|YP_003482768.1|	-	0.064	13.9	0.0	0.088	13.4	0.0	1.2	1	0	0	1	1	1	0	Alpha/beta	hydrolase	family
DPPIV_N	PF00930.21	gi|289596072|ref|YP_003482768.1|	-	0.14	10.9	0.0	1.6	7.4	0.0	2.5	3	0	0	3	3	3	0	Dipeptidyl	peptidase	IV	(DPP	IV)	N-terminal	region
RuvB_C	PF05491.13	gi|289596073|ref|YP_003482769.1|	-	6.4e-06	25.9	0.3	9.4e-06	25.4	0.3	1.3	1	0	0	1	1	1	1	RuvB	C-terminal	winged	helix	domain
TrmB	PF01978.19	gi|289596073|ref|YP_003482769.1|	-	5.3e-05	23.0	0.0	7.2e-05	22.6	0.0	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.6	gi|289596073|ref|YP_003482769.1|	-	0.0013	18.2	0.2	0.0025	17.3	0.2	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_Crp_2	PF13545.6	gi|289596073|ref|YP_003482769.1|	-	0.0021	18.0	0.0	0.0033	17.4	0.0	1.3	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_5	PF01022.20	gi|289596073|ref|YP_003482769.1|	-	0.0053	16.6	0.2	0.0085	15.9	0.2	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_12	PF08461.10	gi|289596073|ref|YP_003482769.1|	-	0.0099	15.8	0.4	0.032	14.2	0.0	2.1	1	1	1	2	2	2	1	Ribonuclease	R	winged-helix	domain
PRK	PF00485.18	gi|289596073|ref|YP_003482769.1|	-	0.013	15.2	0.1	0.013	15.2	0.1	1.3	1	1	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
Ribosomal_S19e	PF01090.19	gi|289596073|ref|YP_003482769.1|	-	0.016	14.9	0.0	0.029	14.1	0.0	1.4	1	1	1	2	2	2	0	Ribosomal	protein	S19e
Phage_rep_org_N	PF09681.10	gi|289596073|ref|YP_003482769.1|	-	0.022	14.7	0.2	0.05	13.5	0.1	1.6	1	1	1	2	2	2	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
Eaf7	PF07904.13	gi|289596073|ref|YP_003482769.1|	-	0.034	14.5	0.2	0.043	14.2	0.2	1.4	1	1	0	1	1	1	0	Chromatin	modification-related	protein	EAF7
Rrf2	PF02082.20	gi|289596073|ref|YP_003482769.1|	-	0.036	14.4	0.1	0.047	14.0	0.1	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
HAD_SAK_2	PF18143.1	gi|289596073|ref|YP_003482769.1|	-	0.058	13.7	0.1	0.069	13.5	0.1	1.0	1	0	0	1	1	1	0	HAD	domain	in	Swiss	Army	Knife	RNA	repair	proteins
MetOD2	PF18548.1	gi|289596073|ref|YP_003482769.1|	-	0.091	12.9	2.7	0.35	11.0	0.4	2.1	2	0	0	2	2	2	0	Metanogen	output	domain	2
DUF4423	PF14394.6	gi|289596073|ref|YP_003482769.1|	-	0.11	12.2	0.9	1.4	8.6	0.8	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4423)
Mt_ATP-synt_D	PF05873.12	gi|289596073|ref|YP_003482769.1|	-	0.16	11.8	0.7	0.24	11.2	0.3	1.6	1	1	1	2	2	2	0	ATP	synthase	D	chain,	mitochondrial	(ATP5H)
Adenylsucc_synt	PF00709.21	gi|289596074|ref|YP_003482770.1|	-	2.3e-144	481.4	0.0	2.7e-144	481.2	0.0	1.0	1	0	0	1	1	1	1	Adenylosuccinate	synthetase
ABC_tran	PF00005.27	gi|289596076|ref|YP_003482772.1|	-	1.9e-39	135.3	0.0	2.1e-18	67.1	0.0	2.5	2	0	0	2	2	2	2	ABC	transporter
AAA_21	PF13304.6	gi|289596076|ref|YP_003482772.1|	-	5e-12	46.3	7.9	0.00032	20.6	0.1	4.2	2	2	2	4	4	4	3	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|289596076|ref|YP_003482772.1|	-	9.9e-12	44.8	9.1	2.2e-06	27.3	2.3	3.8	2	2	0	3	3	3	2	RecF/RecN/SMC	N	terminal	domain
RLI	PF04068.15	gi|289596076|ref|YP_003482772.1|	-	2.5e-07	30.4	3.1	6.1e-07	29.2	3.1	1.7	1	0	0	1	1	1	1	Possible	Fer4-like	domain	in	RNase	L	inhibitor,	RLI
AAA_15	PF13175.6	gi|289596076|ref|YP_003482772.1|	-	3.8e-07	30.2	3.4	0.013	15.2	0.0	4.5	2	2	2	5	5	5	1	AAA	ATPase	domain
Fer4	PF00037.27	gi|289596076|ref|YP_003482772.1|	-	3.4e-06	26.6	4.0	3.4e-06	26.6	4.0	1.8	2	0	0	2	2	1	1	4Fe-4S	binding	domain
AAA_18	PF13238.6	gi|289596076|ref|YP_003482772.1|	-	2.7e-05	24.7	0.2	0.039	14.5	0.0	2.9	2	1	1	3	3	2	1	AAA	domain
AAA_23	PF13476.6	gi|289596076|ref|YP_003482772.1|	-	8.2e-05	23.2	1.8	0.18	12.3	0.7	2.6	2	1	0	2	2	2	2	AAA	domain
Rad17	PF03215.15	gi|289596076|ref|YP_003482772.1|	-	0.00028	20.9	0.4	0.43	10.5	0.1	3.2	2	1	1	3	3	3	1	Rad17	P-loop	domain
Fer4_21	PF14697.6	gi|289596076|ref|YP_003482772.1|	-	0.00036	20.6	7.2	0.0006	19.9	7.2	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
AAA	PF00004.29	gi|289596076|ref|YP_003482772.1|	-	0.0012	19.3	0.3	0.75	10.2	0.0	2.7	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Fer4_2	PF12797.7	gi|289596076|ref|YP_003482772.1|	-	0.0015	18.5	1.2	0.0015	18.5	1.2	2.4	2	0	0	2	2	2	1	4Fe-4S	binding	domain
RsgA_GTPase	PF03193.16	gi|289596076|ref|YP_003482772.1|	-	0.0016	18.4	0.2	0.12	12.2	0.0	2.3	2	0	0	2	2	2	1	RsgA	GTPase
AAA_14	PF13173.6	gi|289596076|ref|YP_003482772.1|	-	0.0029	17.6	0.4	2	8.5	0.0	3.1	3	0	0	3	3	3	1	AAA	domain
Fer4_6	PF12837.7	gi|289596076|ref|YP_003482772.1|	-	0.0047	17.0	2.2	0.0047	17.0	2.2	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
RNA_helicase	PF00910.22	gi|289596076|ref|YP_003482772.1|	-	0.0053	17.1	0.0	3	8.3	0.0	2.7	2	0	0	2	2	2	1	RNA	helicase
AAA_16	PF13191.6	gi|289596076|ref|YP_003482772.1|	-	0.0079	16.6	0.1	2.9	8.2	0.1	2.6	2	1	0	2	2	2	1	AAA	ATPase	domain
AAA_24	PF13479.6	gi|289596076|ref|YP_003482772.1|	-	0.0083	15.9	2.6	1.2	8.8	0.4	2.6	2	1	0	2	2	2	1	AAA	domain
AAA_29	PF13555.6	gi|289596076|ref|YP_003482772.1|	-	0.01	15.6	0.2	2.7	7.8	0.0	2.6	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
SbcCD_C	PF13558.6	gi|289596076|ref|YP_003482772.1|	-	0.011	16.0	0.0	4.3	7.6	0.0	2.8	2	1	0	2	2	2	0	Putative	exonuclease	SbcCD,	C	subunit
VirE	PF05272.11	gi|289596076|ref|YP_003482772.1|	-	0.013	15.3	0.0	2.6	7.7	0.0	2.5	2	0	0	2	2	2	0	Virulence-associated	protein	E
AAA_30	PF13604.6	gi|289596076|ref|YP_003482772.1|	-	0.016	15.0	3.0	5.3	6.7	0.0	3.1	3	0	0	3	3	3	0	AAA	domain
AAA_28	PF13521.6	gi|289596076|ref|YP_003482772.1|	-	0.016	15.5	0.1	7.2	6.8	0.0	2.7	2	0	0	2	2	2	0	AAA	domain
Fer4_9	PF13187.6	gi|289596076|ref|YP_003482772.1|	-	0.021	15.0	7.6	0.041	14.1	7.6	1.4	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|289596076|ref|YP_003482772.1|	-	0.022	14.9	1.1	0.022	14.9	1.1	2.2	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
AAA_33	PF13671.6	gi|289596076|ref|YP_003482772.1|	-	0.028	14.6	1.1	1.1	9.5	0.0	2.8	3	0	0	3	3	2	0	AAA	domain
SRP54	PF00448.22	gi|289596076|ref|YP_003482772.1|	-	0.037	13.7	1.8	2.9	7.5	0.2	2.4	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
MMR_HSR1	PF01926.23	gi|289596076|ref|YP_003482772.1|	-	0.041	14.0	5.4	3.9	7.6	0.1	3.3	3	1	0	3	3	3	0	50S	ribosome-binding	GTPase
Fer4_7	PF12838.7	gi|289596076|ref|YP_003482772.1|	-	0.055	14.1	8.2	0.11	13.1	8.2	1.5	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
AAA_22	PF13401.6	gi|289596076|ref|YP_003482772.1|	-	0.12	12.6	0.7	5.6	7.2	0.1	2.8	2	1	0	2	2	2	0	AAA	domain
T2SSE	PF00437.20	gi|289596076|ref|YP_003482772.1|	-	0.15	11.1	0.6	11	4.9	0.1	2.2	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
AAA_25	PF13481.6	gi|289596076|ref|YP_003482772.1|	-	0.2	11.2	0.3	23	4.5	0.0	3.2	4	0	0	4	4	4	0	AAA	domain
HHH_2	PF12826.7	gi|289596077|ref|YP_003482773.1|	-	7.4e-13	48.4	0.1	1.3e-12	47.6	0.1	1.3	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
ERCC4	PF02732.15	gi|289596077|ref|YP_003482773.1|	-	1.1e-12	48.5	0.0	1.5e-12	48.0	0.0	1.3	1	0	0	1	1	1	1	ERCC4	domain
HHH_5	PF14520.6	gi|289596077|ref|YP_003482773.1|	-	1.1e-12	48.3	0.2	2.3e-12	47.3	0.2	1.4	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
HHH	PF00633.23	gi|289596077|ref|YP_003482773.1|	-	1e-06	28.3	0.3	0.00017	21.3	0.1	2.5	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
HHH_3	PF12836.7	gi|289596077|ref|YP_003482773.1|	-	0.00022	21.4	0.3	0.0015	18.7	0.3	2.1	1	1	0	1	1	1	1	Helix-hairpin-helix	motif
5_3_exonuc	PF01367.20	gi|289596077|ref|YP_003482773.1|	-	0.00076	20.0	0.3	0.029	15.0	0.1	2.3	1	1	1	2	2	2	1	5'-3'	exonuclease,	C-terminal	SAM	fold
HHH_8	PF14716.6	gi|289596077|ref|YP_003482773.1|	-	0.012	16.0	0.3	6.9	7.1	0.0	2.5	1	1	1	2	2	2	0	Helix-hairpin-helix	domain
IMS_HHH	PF11798.8	gi|289596077|ref|YP_003482773.1|	-	0.023	15.0	0.1	1.3	9.5	0.0	2.8	3	0	0	3	3	3	0	IMS	family	HHH	motif
HRDC	PF00570.23	gi|289596077|ref|YP_003482773.1|	-	0.062	13.3	0.2	0.59	10.2	0.0	2.5	2	1	0	2	2	2	0	HRDC	domain
DEAD	PF00270.29	gi|289596078|ref|YP_003482774.1|	-	3.7e-26	91.9	0.0	1.1e-25	90.4	0.0	1.8	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
HHH_5	PF14520.6	gi|289596078|ref|YP_003482774.1|	-	3.3e-11	43.6	0.3	1.1e-10	42.0	0.3	1.9	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
ResIII	PF04851.15	gi|289596078|ref|YP_003482774.1|	-	9.7e-11	42.0	0.0	4.3e-10	39.8	0.0	2.0	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.31	gi|289596078|ref|YP_003482774.1|	-	3.6e-10	40.2	0.6	2.1e-08	34.5	0.1	3.4	2	1	0	2	2	2	1	Helicase	conserved	C-terminal	domain
HHH_2	PF12826.7	gi|289596078|ref|YP_003482774.1|	-	2.7e-08	33.8	0.0	9e-07	28.9	0.0	3.0	3	0	0	3	3	3	1	Helix-hairpin-helix	motif
HHH	PF00633.23	gi|289596078|ref|YP_003482774.1|	-	7.6e-06	25.5	0.1	0.0027	17.5	0.2	2.8	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
IMS_HHH	PF11798.8	gi|289596078|ref|YP_003482774.1|	-	0.00019	21.6	0.2	0.53	10.7	0.1	2.8	2	0	0	2	2	2	2	IMS	family	HHH	motif
DNA_pol_lambd_f	PF10391.9	gi|289596078|ref|YP_003482774.1|	-	0.0019	18.0	0.0	0.0091	15.8	0.0	2.2	1	1	0	1	1	1	1	Fingers	domain	of	DNA	polymerase	lambda
HTH_24	PF13412.6	gi|289596079|ref|YP_003482775.1|	-	1.8e-16	59.4	1.7	2.8e-16	58.8	1.7	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
AsnC_trans_reg	PF01037.21	gi|289596079|ref|YP_003482775.1|	-	4.7e-14	52.1	0.0	9.1e-14	51.2	0.0	1.5	2	0	0	2	2	1	1	Lrp/AsnC	ligand	binding	domain
HTH_AsnC-type	PF13404.6	gi|289596079|ref|YP_003482775.1|	-	1.3e-13	50.5	0.8	2.1e-13	49.8	0.8	1.4	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_Mga	PF08280.11	gi|289596079|ref|YP_003482775.1|	-	1.5e-08	34.6	0.1	2.6e-08	33.8	0.1	1.3	1	0	0	1	1	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_11	PF08279.12	gi|289596079|ref|YP_003482775.1|	-	7.3e-08	32.2	0.2	1.3e-07	31.4	0.2	1.5	1	0	0	1	1	1	1	HTH	domain
Sigma70_r4	PF04545.16	gi|289596079|ref|YP_003482775.1|	-	7.4e-07	28.6	0.0	1.4e-06	27.7	0.0	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_DeoR	PF08220.12	gi|289596079|ref|YP_003482775.1|	-	1e-05	25.2	0.2	1.6e-05	24.6	0.2	1.3	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
Sigma70_r4_2	PF08281.12	gi|289596079|ref|YP_003482775.1|	-	1.5e-05	24.6	0.1	4.2e-05	23.1	0.1	1.8	1	1	0	1	1	1	1	Sigma-70,	region	4
TrmB	PF01978.19	gi|289596079|ref|YP_003482775.1|	-	3.3e-05	23.7	0.1	8e-05	22.4	0.0	1.7	2	0	0	2	2	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_5	PF01022.20	gi|289596079|ref|YP_003482775.1|	-	5.1e-05	23.1	0.0	9.4e-05	22.2	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_28	PF13518.6	gi|289596079|ref|YP_003482775.1|	-	5.9e-05	23.1	0.0	0.00011	22.3	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.6	gi|289596079|ref|YP_003482775.1|	-	0.00022	20.9	0.0	0.00039	20.1	0.0	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
MarR_2	PF12802.7	gi|289596079|ref|YP_003482775.1|	-	0.00035	20.4	0.0	0.00056	19.7	0.0	1.4	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.22	gi|289596079|ref|YP_003482775.1|	-	0.00045	20.1	0.1	0.00073	19.4	0.1	1.3	1	0	0	1	1	1	1	MarR	family
HTH_8	PF02954.19	gi|289596079|ref|YP_003482775.1|	-	0.00054	19.7	0.1	0.0021	17.8	0.1	1.9	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	Fis	family
HTH_20	PF12840.7	gi|289596079|ref|YP_003482775.1|	-	0.00056	19.9	0.0	0.00082	19.4	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_10	PF04967.12	gi|289596079|ref|YP_003482775.1|	-	0.0011	18.7	0.1	0.0031	17.3	0.0	1.8	2	0	0	2	2	1	1	HTH	DNA	binding	domain
HTH_Crp_2	PF13545.6	gi|289596079|ref|YP_003482775.1|	-	0.0027	17.6	0.0	0.0074	16.2	0.0	1.8	2	0	0	2	2	1	1	Crp-like	helix-turn-helix	domain
TFIIE_alpha	PF02002.17	gi|289596079|ref|YP_003482775.1|	-	0.005	16.7	0.5	0.014	15.2	0.2	1.9	1	1	1	2	2	2	1	TFIIE	alpha	subunit
Rrf2	PF02082.20	gi|289596079|ref|YP_003482775.1|	-	0.0064	16.8	0.0	0.017	15.4	0.0	1.8	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_Tnp_ISL3	PF13542.6	gi|289596079|ref|YP_003482775.1|	-	0.0072	15.7	0.0	0.013	14.9	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain	of	transposase	family	ISL3
HxlR	PF01638.17	gi|289596079|ref|YP_003482775.1|	-	0.0081	16.0	0.0	0.018	14.9	0.0	1.5	2	0	0	2	2	1	1	HxlR-like	helix-turn-helix
DUF977	PF06163.11	gi|289596079|ref|YP_003482775.1|	-	0.0094	15.9	0.1	0.023	14.6	0.1	1.6	1	0	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF977)
HTH_38	PF13936.6	gi|289596079|ref|YP_003482775.1|	-	0.0096	15.7	0.3	0.02	14.6	0.3	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
GerE	PF00196.19	gi|289596079|ref|YP_003482775.1|	-	0.01	15.3	0.1	0.022	14.3	0.1	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
FaeA	PF04703.12	gi|289596079|ref|YP_003482775.1|	-	0.016	15.6	0.0	0.027	14.8	0.0	1.4	1	0	0	1	1	1	0	FaeA-like	protein
HTH_12	PF08461.10	gi|289596079|ref|YP_003482775.1|	-	0.028	14.4	0.4	0.11	12.4	0.4	2.1	1	1	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
DUF4423	PF14394.6	gi|289596079|ref|YP_003482775.1|	-	0.031	14.0	0.0	0.066	12.9	0.0	1.5	2	0	0	2	2	1	0	Domain	of	unknown	function	(DUF4423)
HTH_29	PF13551.6	gi|289596079|ref|YP_003482775.1|	-	0.04	13.9	0.1	0.067	13.2	0.1	1.4	1	0	0	1	1	1	0	Winged	helix-turn	helix
HTH_9	PF08221.11	gi|289596079|ref|YP_003482775.1|	-	0.043	13.9	0.1	0.33	11.1	0.0	2.0	2	0	0	2	2	2	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
HTH_34	PF13601.6	gi|289596079|ref|YP_003482775.1|	-	0.049	13.8	0.0	0.091	12.9	0.0	1.4	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_6	PF01418.17	gi|289596079|ref|YP_003482775.1|	-	0.05	13.6	0.0	0.097	12.7	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain,	rpiR	family
DUF2089	PF09862.9	gi|289596079|ref|YP_003482775.1|	-	0.054	13.5	0.1	0.1	12.6	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2089)
Mga	PF05043.13	gi|289596079|ref|YP_003482775.1|	-	0.057	14.0	0.0	0.091	13.4	0.0	1.3	1	0	0	1	1	1	0	Mga	helix-turn-helix	domain
HTH_27	PF13463.6	gi|289596079|ref|YP_003482775.1|	-	0.068	13.7	0.0	0.12	12.9	0.0	1.4	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
YjcQ	PF09639.10	gi|289596079|ref|YP_003482775.1|	-	0.069	13.4	0.6	2.4	8.4	0.0	2.6	1	1	2	3	3	3	0	YjcQ	protein
PCI	PF01399.27	gi|289596079|ref|YP_003482775.1|	-	0.08	13.5	0.0	0.16	12.5	0.0	1.4	1	0	0	1	1	1	0	PCI	domain
HTH_50	PF18024.1	gi|289596079|ref|YP_003482775.1|	-	0.087	12.4	0.1	0.19	11.3	0.1	1.6	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_30	PF13556.6	gi|289596079|ref|YP_003482775.1|	-	0.11	12.4	0.0	0.27	11.1	0.0	1.7	1	0	0	1	1	1	0	PucR	C-terminal	helix-turn-helix	domain
NapD	PF03927.13	gi|289596079|ref|YP_003482775.1|	-	0.12	12.4	0.1	0.25	11.4	0.1	1.5	1	0	0	1	1	1	0	NapD	protein
HTH_WhiA	PF02650.14	gi|289596079|ref|YP_003482775.1|	-	0.3	11.4	2.1	0.31	11.4	0.3	1.9	2	0	0	2	2	2	0	WhiA	C-terminal	HTH	domain
SBP_bac_3	PF00497.20	gi|289596080|ref|YP_003482776.1|	-	2.9e-48	164.2	0.1	4.5e-48	163.6	0.1	1.3	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	3
PAS_8	PF13188.7	gi|289596080|ref|YP_003482776.1|	-	2e-06	27.7	0.0	4.3e-06	26.6	0.0	1.6	1	0	0	1	1	1	1	PAS	domain
PAS_9	PF13426.7	gi|289596080|ref|YP_003482776.1|	-	2.9e-05	24.3	0.1	0.00022	21.4	0.1	2.4	1	1	0	1	1	1	1	PAS	domain
PAS	PF00989.25	gi|289596080|ref|YP_003482776.1|	-	4.9e-05	23.3	0.0	0.00025	21.0	0.0	2.2	2	1	0	2	2	2	1	PAS	fold
Lig_chan-Glu_bd	PF10613.9	gi|289596080|ref|YP_003482776.1|	-	0.013	15.7	1.5	0.2	11.9	0.2	2.8	2	1	0	2	2	2	0	Ligated	ion	channel	L-glutamate-	and	glycine-binding	site
VID27_PH	PF17747.1	gi|289596080|ref|YP_003482776.1|	-	0.017	15.4	0.7	0.051	13.9	0.7	1.8	1	0	0	1	1	1	0	VID27	PH-like	domain
PAS_3	PF08447.12	gi|289596080|ref|YP_003482776.1|	-	0.019	15.2	0.1	3.5	8.0	0.1	2.5	1	1	1	2	2	2	0	PAS	fold
CathepsinC_exc	PF08773.11	gi|289596080|ref|YP_003482776.1|	-	0.079	13.2	0.0	0.2	12.0	0.0	1.6	1	0	0	1	1	1	0	Cathepsin	C	exclusion	domain
PAS_4	PF08448.10	gi|289596080|ref|YP_003482776.1|	-	0.087	13.1	0.0	0.18	12.0	0.0	1.5	1	0	0	1	1	1	0	PAS	fold
SLAC1	PF03595.17	gi|289596081|ref|YP_003482777.1|	-	2.8e-52	178.0	52.1	3.1e-52	177.8	52.1	1.0	1	0	0	1	1	1	1	Voltage-dependent	anion	channel
AAA	PF00004.29	gi|289596082|ref|YP_003482778.1|	-	2.5e-100	332.1	0.0	1.3e-49	168.0	0.0	2.5	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_lid_3	PF17862.1	gi|289596082|ref|YP_003482778.1|	-	6.7e-38	128.3	0.6	3.6e-18	65.1	0.1	2.7	2	0	0	2	2	2	2	AAA+	lid	domain
CDC48_N	PF02359.18	gi|289596082|ref|YP_003482778.1|	-	3.7e-31	107.2	0.2	2.2e-30	104.7	0.6	2.2	2	0	0	2	2	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
RuvB_N	PF05496.12	gi|289596082|ref|YP_003482778.1|	-	4.3e-18	65.5	0.0	1.3e-08	34.7	0.0	2.9	2	2	0	2	2	2	2	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_16	PF13191.6	gi|289596082|ref|YP_003482778.1|	-	1.2e-16	61.6	0.3	9.9e-08	32.5	0.0	3.9	3	1	1	4	4	4	2	AAA	ATPase	domain
AAA_2	PF07724.14	gi|289596082|ref|YP_003482778.1|	-	4.6e-16	59.4	0.0	1.7e-07	31.5	0.0	2.6	2	0	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
CDC48_2	PF02933.17	gi|289596082|ref|YP_003482778.1|	-	2e-13	49.9	1.7	3.1e-12	46.1	0.1	3.3	4	0	0	4	4	4	1	Cell	division	protein	48	(CDC48),	domain	2
AAA_5	PF07728.14	gi|289596082|ref|YP_003482778.1|	-	1.7e-12	47.5	0.4	0.00019	21.4	0.0	4.0	2	2	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
AAA_22	PF13401.6	gi|289596082|ref|YP_003482778.1|	-	4.1e-12	46.6	1.4	0.0019	18.5	0.0	4.4	2	2	1	4	4	4	2	AAA	domain
AAA_14	PF13173.6	gi|289596082|ref|YP_003482778.1|	-	8.2e-12	45.3	0.0	5.7e-06	26.4	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
TIP49	PF06068.13	gi|289596082|ref|YP_003482778.1|	-	6.8e-11	42.0	0.3	0.00032	20.0	0.0	2.8	3	0	0	3	3	2	2	TIP49	P-loop	domain
AAA_33	PF13671.6	gi|289596082|ref|YP_003482778.1|	-	2.3e-09	37.5	0.0	0.00037	20.7	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
Bac_DnaA	PF00308.18	gi|289596082|ref|YP_003482778.1|	-	6.6e-09	35.9	0.0	7.3e-05	22.7	0.0	2.4	2	0	0	2	2	2	2	Bacterial	dnaA	protein
IstB_IS21	PF01695.17	gi|289596082|ref|YP_003482778.1|	-	8.9e-09	35.3	0.0	0.0036	17.1	0.0	2.4	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
AAA_18	PF13238.6	gi|289596082|ref|YP_003482778.1|	-	3.5e-08	34.1	0.0	0.0063	17.1	0.0	2.9	2	0	0	2	2	2	2	AAA	domain
Sigma54_activat	PF00158.26	gi|289596082|ref|YP_003482778.1|	-	6.8e-08	32.4	0.1	0.017	14.9	0.0	3.8	2	2	0	2	2	2	2	Sigma-54	interaction	domain
AAA_24	PF13479.6	gi|289596082|ref|YP_003482778.1|	-	1e-07	31.9	0.0	0.034	13.9	0.0	3.4	3	0	0	3	3	3	2	AAA	domain
RNA_helicase	PF00910.22	gi|289596082|ref|YP_003482778.1|	-	1.3e-07	32.0	0.0	0.022	15.2	0.0	2.9	2	0	0	2	2	2	2	RNA	helicase
Mg_chelatase	PF01078.21	gi|289596082|ref|YP_003482778.1|	-	3.9e-07	29.7	0.1	0.026	13.9	0.0	2.4	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
TsaE	PF02367.17	gi|289596082|ref|YP_003482778.1|	-	7.8e-07	29.1	0.3	0.044	13.8	0.1	3.2	2	1	1	3	3	3	2	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
DUF815	PF05673.13	gi|289596082|ref|YP_003482778.1|	-	1e-06	28.1	0.0	0.089	11.9	0.0	3.2	2	1	1	3	3	3	2	Protein	of	unknown	function	(DUF815)
AAA_7	PF12775.7	gi|289596082|ref|YP_003482778.1|	-	1.2e-06	28.1	0.0	0.072	12.6	0.0	2.8	2	0	0	2	2	2	2	P-loop	containing	dynein	motor	region
AAA_28	PF13521.6	gi|289596082|ref|YP_003482778.1|	-	1.7e-06	28.3	0.0	0.077	13.2	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
ATPase_2	PF01637.18	gi|289596082|ref|YP_003482778.1|	-	3.2e-06	27.2	0.0	0.047	13.6	0.0	3.5	2	1	1	3	3	3	1	ATPase	domain	predominantly	from	Archaea
Zeta_toxin	PF06414.12	gi|289596082|ref|YP_003482778.1|	-	2.5e-05	23.7	0.0	0.12	11.7	0.0	2.5	2	0	0	2	2	2	2	Zeta	toxin
NACHT	PF05729.12	gi|289596082|ref|YP_003482778.1|	-	3e-05	24.0	0.1	0.77	9.7	0.0	3.8	3	1	1	4	4	4	2	NACHT	domain
PhoH	PF02562.16	gi|289596082|ref|YP_003482778.1|	-	3e-05	23.6	1.3	0.31	10.5	0.0	3.1	3	0	0	3	3	3	2	PhoH-like	protein
DUF2075	PF09848.9	gi|289596082|ref|YP_003482778.1|	-	7.6e-05	22.1	0.0	0.21	10.8	0.0	2.4	2	0	0	2	2	2	2	Uncharacterized	conserved	protein	(DUF2075)
Parvo_NS1	PF01057.17	gi|289596082|ref|YP_003482778.1|	-	7.7e-05	21.9	0.1	0.38	9.8	0.0	2.3	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
ABC_tran	PF00005.27	gi|289596082|ref|YP_003482778.1|	-	9.5e-05	22.9	0.0	0.84	10.2	0.0	2.7	2	0	0	2	2	2	2	ABC	transporter
AAA_3	PF07726.11	gi|289596082|ref|YP_003482778.1|	-	0.0001	22.1	0.0	0.58	10.0	0.0	2.6	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
ATPase	PF06745.13	gi|289596082|ref|YP_003482778.1|	-	0.00011	21.7	5.5	0.43	9.9	0.0	4.2	4	1	1	5	5	4	2	KaiC
AAA_25	PF13481.6	gi|289596082|ref|YP_003482778.1|	-	0.00017	21.2	9.4	1	8.9	0.1	4.3	3	1	1	4	4	4	2	AAA	domain
AAA_17	PF13207.6	gi|289596082|ref|YP_003482778.1|	-	0.00017	22.0	0.0	1	9.8	0.0	3.8	3	1	0	3	3	2	1	AAA	domain
NB-ARC	PF00931.22	gi|289596082|ref|YP_003482778.1|	-	0.00028	20.2	0.0	0.91	8.7	0.0	3.0	3	0	0	3	3	3	2	NB-ARC	domain
AAA_11	PF13086.6	gi|289596082|ref|YP_003482778.1|	-	0.00037	20.4	0.1	0.82	9.4	0.0	2.5	3	0	0	3	3	2	2	AAA	domain
AAA_30	PF13604.6	gi|289596082|ref|YP_003482778.1|	-	0.00043	20.0	0.0	1.2	8.9	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
NTPase_1	PF03266.15	gi|289596082|ref|YP_003482778.1|	-	0.00088	19.2	3.6	7.5	6.4	0.0	5.1	4	1	1	5	5	5	0	NTPase
TniB	PF05621.11	gi|289596082|ref|YP_003482778.1|	-	0.0013	18.2	0.0	2.9	7.3	0.0	3.7	4	0	0	4	4	4	1	Bacterial	TniB	protein
Zot	PF05707.12	gi|289596082|ref|YP_003482778.1|	-	0.0018	17.9	0.6	0.55	9.8	0.0	3.9	4	1	0	4	4	3	1	Zonular	occludens	toxin	(Zot)
AFG1_ATPase	PF03969.16	gi|289596082|ref|YP_003482778.1|	-	0.0029	16.6	0.0	1.1	8.1	0.0	2.4	2	0	0	2	2	2	1	AFG1-like	ATPase
Vps4_C	PF09336.10	gi|289596082|ref|YP_003482778.1|	-	0.0031	17.5	0.6	2.8	8.0	0.0	2.6	2	0	0	2	2	2	1	Vps4	C	terminal	oligomerisation	domain
Sigma54_activ_2	PF14532.6	gi|289596082|ref|YP_003482778.1|	-	0.0057	16.8	0.0	5.8	7.0	0.0	2.6	2	0	0	2	2	2	0	Sigma-54	interaction	domain
Cytidylate_kin	PF02224.18	gi|289596082|ref|YP_003482778.1|	-	0.0065	16.2	0.3	5.6	6.6	0.0	3.2	3	0	0	3	3	3	0	Cytidylate	kinase
AAA_19	PF13245.6	gi|289596082|ref|YP_003482778.1|	-	0.0092	16.3	3.7	2.7	8.3	0.1	3.1	2	2	1	4	4	2	1	AAA	domain
T2SSE	PF00437.20	gi|289596082|ref|YP_003482778.1|	-	0.02	13.9	0.0	6.6	5.7	0.0	2.5	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
AAA_29	PF13555.6	gi|289596082|ref|YP_003482778.1|	-	0.028	14.1	0.0	6.7	6.5	0.0	2.5	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
ATP-synt_ab	PF00006.25	gi|289596082|ref|YP_003482778.1|	-	0.046	13.4	0.0	8.6	5.9	0.0	2.5	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ResIII	PF04851.15	gi|289596082|ref|YP_003482778.1|	-	0.049	13.6	0.0	16	5.4	0.0	2.8	2	1	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
Cytidylate_kin2	PF13189.6	gi|289596082|ref|YP_003482778.1|	-	0.05	13.7	0.0	15	5.7	0.0	2.7	2	0	0	2	2	2	0	Cytidylate	kinase-like	family
UFD1	PF03152.14	gi|289596082|ref|YP_003482778.1|	-	0.095	12.2	0.1	0.27	10.7	0.1	1.7	1	1	1	2	2	2	0	Ubiquitin	fusion	degradation	protein	UFD1
MCM	PF00493.23	gi|289596082|ref|YP_003482778.1|	-	0.097	11.8	0.0	6.2	5.9	0.0	2.5	3	0	0	3	3	2	0	MCM	P-loop	domain
CPT	PF07931.12	gi|289596082|ref|YP_003482778.1|	-	0.12	12.2	0.0	11	5.8	0.0	2.5	2	0	0	2	2	2	0	Chloramphenicol	phosphotransferase-like	protein
PduV-EutP	PF10662.9	gi|289596082|ref|YP_003482778.1|	-	0.13	12.0	0.1	21	4.9	0.0	2.7	3	0	0	3	3	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
IPT	PF01745.16	gi|289596082|ref|YP_003482778.1|	-	0.13	11.6	0.1	17	4.7	0.0	2.3	2	0	0	2	2	2	0	Isopentenyl	transferase
HSP20	PF00011.21	gi|289596083|ref|YP_003482779.1|	-	7.7e-18	64.5	2.7	1.1e-17	64.1	2.7	1.2	1	0	0	1	1	1	1	Hsp20/alpha	crystallin	family
ArsA_HSP20	PF17886.1	gi|289596083|ref|YP_003482779.1|	-	9.1e-13	47.6	0.2	1.5e-12	46.9	0.2	1.4	1	0	0	1	1	1	1	HSP20-like	domain	found	in	ArsA
PIH1_CS	PF18201.1	gi|289596083|ref|YP_003482779.1|	-	0.00061	20.1	0.6	0.0009	19.6	0.6	1.4	1	0	0	1	1	1	1	PIH1	CS-like	domain
CS	PF04969.16	gi|289596083|ref|YP_003482779.1|	-	0.0028	18.6	0.6	0.0043	18.0	0.6	1.3	1	0	0	1	1	1	1	CS	domain
GvpH	PF05455.11	gi|289596083|ref|YP_003482779.1|	-	0.051	13.6	0.7	0.2	11.7	0.1	1.9	1	1	1	2	2	2	0	GvpH
Mst1_SARAH	PF11629.8	gi|289596083|ref|YP_003482779.1|	-	3.5	7.8	8.6	0.31	11.1	2.3	2.2	2	0	0	2	2	2	0	C	terminal	SARAH	domain	of	Mst1
SBP_bac_5	PF00496.22	gi|289596084|ref|YP_003482780.1|	-	3.5e-95	319.1	10.0	4.4e-95	318.8	10.0	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
DUF4245	PF14030.6	gi|289596084|ref|YP_003482780.1|	-	0.11	12.5	0.8	6.4	6.8	0.1	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4245)
BPD_transp_1	PF00528.22	gi|289596085|ref|YP_003482781.1|	-	1.4e-44	152.0	16.4	1.4e-44	152.0	16.4	2.1	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.22	gi|289596086|ref|YP_003482782.1|	-	2.3e-24	86.1	11.0	2.3e-24	86.1	11.0	2.2	2	1	1	3	3	3	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.7	gi|289596086|ref|YP_003482782.1|	-	6e-07	29.3	1.8	6e-07	29.3	1.8	3.6	4	0	0	4	4	4	1	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
FtsX	PF02687.21	gi|289596086|ref|YP_003482782.1|	-	0.041	14.3	1.2	0.041	14.3	1.2	3.4	3	1	0	3	3	3	0	FtsX-like	permease	family
ABC_tran	PF00005.27	gi|289596087|ref|YP_003482783.1|	-	3e-27	95.8	0.0	4.3e-27	95.3	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.12	gi|289596087|ref|YP_003482783.1|	-	5.6e-17	62.0	0.0	1.2e-16	61.0	0.0	1.6	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
SMC_N	PF02463.19	gi|289596087|ref|YP_003482783.1|	-	1.3e-06	28.0	0.2	2.9e-06	26.9	0.2	1.4	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_21	PF13304.6	gi|289596087|ref|YP_003482783.1|	-	3.6e-06	27.0	2.1	8.9e-05	22.4	0.2	2.1	1	1	0	2	2	2	1	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_15	PF13175.6	gi|289596087|ref|YP_003482783.1|	-	0.00029	20.7	0.2	0.069	12.8	0.1	2.1	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA_29	PF13555.6	gi|289596087|ref|YP_003482783.1|	-	0.00045	19.9	0.0	0.00087	19.0	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
ABC_ATPase	PF09818.9	gi|289596087|ref|YP_003482783.1|	-	0.004	16.0	0.2	0.76	8.5	0.0	2.1	2	0	0	2	2	2	2	Predicted	ATPase	of	the	ABC	class
AAA_22	PF13401.6	gi|289596087|ref|YP_003482783.1|	-	0.0057	16.9	0.2	0.028	14.7	0.2	2.0	1	1	0	1	1	1	1	AAA	domain
RsgA_GTPase	PF03193.16	gi|289596087|ref|YP_003482783.1|	-	0.0067	16.3	0.0	0.015	15.2	0.0	1.6	2	0	0	2	2	1	1	RsgA	GTPase
tRNA_lig_kinase	PF08303.11	gi|289596087|ref|YP_003482783.1|	-	0.0076	16.4	0.0	0.016	15.3	0.0	1.5	1	0	0	1	1	1	1	tRNA	ligase	kinase	domain
AAA	PF00004.29	gi|289596087|ref|YP_003482783.1|	-	0.028	14.9	0.2	0.069	13.6	0.0	1.8	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_18	PF13238.6	gi|289596087|ref|YP_003482783.1|	-	0.031	14.8	0.1	0.071	13.7	0.1	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_33	PF13671.6	gi|289596087|ref|YP_003482783.1|	-	0.05	13.8	0.2	0.11	12.6	0.1	1.5	1	1	0	1	1	1	0	AAA	domain
Mg_chelatase	PF01078.21	gi|289596087|ref|YP_003482783.1|	-	0.069	12.5	0.0	0.23	10.8	0.0	1.7	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
PRK	PF00485.18	gi|289596087|ref|YP_003482783.1|	-	0.07	12.9	0.0	0.11	12.3	0.0	1.3	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_7	PF12775.7	gi|289596087|ref|YP_003482783.1|	-	0.077	12.5	0.0	0.14	11.6	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
AAA_16	PF13191.6	gi|289596087|ref|YP_003482783.1|	-	0.079	13.3	0.0	0.13	12.7	0.0	1.5	1	0	0	1	1	1	0	AAA	ATPase	domain
NB-ARC	PF00931.22	gi|289596087|ref|YP_003482783.1|	-	0.085	12.0	0.0	0.16	11.1	0.0	1.4	1	0	0	1	1	1	0	NB-ARC	domain
APS_kinase	PF01583.20	gi|289596087|ref|YP_003482783.1|	-	0.088	12.7	0.0	0.25	11.2	0.0	1.8	2	0	0	2	2	2	0	Adenylylsulphate	kinase
AAA_30	PF13604.6	gi|289596087|ref|YP_003482783.1|	-	0.13	12.0	0.1	1.9	8.2	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
MMR_HSR1	PF01926.23	gi|289596087|ref|YP_003482783.1|	-	0.16	12.0	0.0	0.31	11.1	0.0	1.6	1	0	0	1	1	1	0	50S	ribosome-binding	GTPase
RNA_helicase	PF00910.22	gi|289596087|ref|YP_003482783.1|	-	0.17	12.3	0.0	0.39	11.1	0.0	1.7	1	0	0	1	1	1	0	RNA	helicase
ABC_tran	PF00005.27	gi|289596088|ref|YP_003482784.1|	-	3.1e-32	112.0	0.0	4.1e-32	111.5	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.12	gi|289596088|ref|YP_003482784.1|	-	3.7e-23	81.8	0.1	7.1e-23	80.9	0.1	1.5	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_22	PF13401.6	gi|289596088|ref|YP_003482784.1|	-	2.9e-05	24.4	1.7	0.00038	20.7	1.7	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.6	gi|289596088|ref|YP_003482784.1|	-	0.0035	17.7	0.1	0.0053	17.2	0.1	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
ATP-synt_ab	PF00006.25	gi|289596088|ref|YP_003482784.1|	-	0.054	13.1	0.0	0.055	13.1	0.0	1.2	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_29	PF13555.6	gi|289596088|ref|YP_003482784.1|	-	0.062	13.1	0.1	0.11	12.3	0.1	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_30	PF13604.6	gi|289596088|ref|YP_003482784.1|	-	0.083	12.6	0.2	1.5	8.5	0.1	2.1	2	0	0	2	2	2	0	AAA	domain
AAA_5	PF07728.14	gi|289596088|ref|YP_003482784.1|	-	0.085	12.9	0.1	0.44	10.5	0.1	1.9	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
AAA	PF00004.29	gi|289596088|ref|YP_003482784.1|	-	0.15	12.4	1.8	1.3	9.4	1.8	2.1	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF2830	PF11125.8	gi|289596089|ref|YP_003482785.1|	-	0.056	13.4	1.1	0.1	12.6	0.2	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2830)
CD225	PF04505.12	gi|289596089|ref|YP_003482785.1|	-	0.15	12.2	0.6	0.37	10.9	0.6	1.8	1	1	0	1	1	1	0	Interferon-induced	transmembrane	protein
RNase_PH	PF01138.21	gi|289596090|ref|YP_003482786.1|	-	2.1e-19	70.4	0.0	4.8e-19	69.2	0.0	1.5	2	0	0	2	2	2	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.15	gi|289596090|ref|YP_003482786.1|	-	6.4e-11	42.1	0.2	1.3e-10	41.2	0.2	1.5	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	2
GATase_4	PF13230.6	gi|289596091|ref|YP_003482787.1|	-	2.9e-11	42.8	0.1	1.5e-05	24.1	0.0	3.8	1	1	2	3	3	3	3	Glutamine	amidotransferases	class-II
Metallophos	PF00149.28	gi|289596092|ref|YP_003482788.1|	-	2.1e-07	31.7	0.5	6.8e-07	30.0	0.5	1.7	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|289596092|ref|YP_003482788.1|	-	1.3e-06	28.7	0.0	2.7e-06	27.7	0.0	1.5	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
YqhR	PF11085.8	gi|289596092|ref|YP_003482788.1|	-	0.037	14.0	0.0	0.066	13.1	0.0	1.5	1	0	0	1	1	1	0	Conserved	membrane	protein	YqhR
RibD_C	PF01872.17	gi|289596093|ref|YP_003482789.1|	-	9.5e-55	185.5	0.1	1.1e-54	185.4	0.1	1.0	1	0	0	1	1	1	1	RibD	C-terminal	domain
Prenyltransf	PF01255.19	gi|289596094|ref|YP_003482790.1|	-	3.3e-85	285.2	0.4	3.8e-85	285.0	0.4	1.0	1	0	0	1	1	1	1	Putative	undecaprenyl	diphosphate	synthase
AP_endonuc_2	PF01261.24	gi|289596094|ref|YP_003482790.1|	-	0.029	13.8	0.3	0.14	11.6	0.3	2.0	1	1	0	1	1	1	0	Xylose	isomerase-like	TIM	barrel
GHL6	PF14871.6	gi|289596094|ref|YP_003482790.1|	-	0.052	13.7	0.1	0.15	12.2	0.1	1.8	1	1	0	1	1	1	0	Hypothetical	glycosyl	hydrolase	6
GHMP_kinases_C	PF08544.13	gi|289596094|ref|YP_003482790.1|	-	0.13	12.6	0.1	21	5.6	0.1	2.7	1	1	1	2	2	2	0	GHMP	kinases	C	terminal
Ribosomal_S20p	PF01649.18	gi|289596094|ref|YP_003482790.1|	-	0.16	12.6	1.5	2.3	8.9	0.1	2.7	3	0	0	3	3	3	0	Ribosomal	protein	S20
TrkA_N	PF02254.18	gi|289596095|ref|YP_003482791.1|	-	1.6e-17	63.9	1.8	4.3e-17	62.4	0.8	2.2	2	1	0	2	2	2	1	TrkA-N	domain
TrkA_C	PF02080.21	gi|289596095|ref|YP_003482791.1|	-	4.7e-11	42.4	1.3	2.5e-10	40.0	0.6	2.4	2	0	0	2	2	2	1	TrkA-C	domain
MIT_C	PF16565.5	gi|289596095|ref|YP_003482791.1|	-	0.12	12.3	0.0	0.22	11.5	0.0	1.3	1	0	0	1	1	1	0	Phospholipase	D-like	domain	at	C-terminus	of	MIT
TrkA_N	PF02254.18	gi|289596096|ref|YP_003482792.1|	-	8.3e-13	48.6	2.1	1.3e-12	48.0	1.4	1.7	2	0	0	2	2	2	1	TrkA-N	domain
TrkA_C	PF02080.21	gi|289596096|ref|YP_003482792.1|	-	1.7e-10	40.5	0.0	5.6e-10	38.9	0.0	1.8	1	0	0	1	1	1	1	TrkA-C	domain
Ion_trans_2	PF07885.16	gi|289596096|ref|YP_003482792.1|	-	5.8e-09	35.8	10.4	1.1e-08	34.8	10.4	1.4	1	0	0	1	1	1	1	Ion	channel
Castor_Poll_mid	PF06241.12	gi|289596096|ref|YP_003482792.1|	-	0.00067	19.6	0.1	0.0015	18.5	0.1	1.5	1	0	0	1	1	1	1	Castor	and	Pollux,	part	of	voltage-gated	ion	channel
DUF3681	PF12442.8	gi|289596096|ref|YP_003482792.1|	-	0.069	13.6	0.3	0.23	11.9	0.2	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3681)
ABC2_membrane_5	PF13346.6	gi|289596096|ref|YP_003482792.1|	-	0.45	10.0	9.6	0.68	9.5	9.6	1.2	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
Get5_C	PF18514.1	gi|289596097|ref|YP_003482793.1|	-	0.14	11.9	0.0	0.27	11.0	0.0	1.4	1	0	0	1	1	1	0	Get5	C-terminal	domain
Rpr2	PF04032.16	gi|289596098|ref|YP_003482794.1|	-	1.2e-18	67.1	0.5	1.6e-18	66.8	0.5	1.1	1	0	0	1	1	1	1	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
HydF_tetramer	PF18133.1	gi|289596098|ref|YP_003482794.1|	-	0.014	15.1	0.5	0.018	14.8	0.4	1.3	1	1	0	1	1	1	0	Hydrogen	maturase	F	tetramerization	domain
C1_1	PF00130.22	gi|289596098|ref|YP_003482794.1|	-	0.021	14.7	0.6	0.032	14.1	0.6	1.2	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
Peptidase_S49	PF01343.18	gi|289596098|ref|YP_003482794.1|	-	0.1	12.5	0.5	1.6	8.7	0.1	2.0	2	0	0	2	2	2	0	Peptidase	family	S49
zinc_ribbon_4	PF13717.6	gi|289596098|ref|YP_003482794.1|	-	0.33	10.9	4.4	5.5	7.0	0.5	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
Bac_DNA_binding	PF00216.21	gi|289596099|ref|YP_003482795.1|	-	6.7e-25	87.1	3.9	8.7e-25	86.8	3.9	1.0	1	0	0	1	1	1	1	Bacterial	DNA-binding	protein
HU-HIG	PF18291.1	gi|289596099|ref|YP_003482795.1|	-	3.7e-09	36.7	0.4	4.5e-09	36.5	0.4	1.0	1	0	0	1	1	1	1	HU	domain	fused	to	wHTH,	Ig,	or	Glycine-rich	motif
HU-CCDC81_bac_2	PF18175.1	gi|289596099|ref|YP_003482795.1|	-	6e-06	26.0	0.1	1.2e-05	25.1	0.0	1.4	2	0	0	2	2	2	1	CCDC81-like	prokaryotic	HU	domain	2
HU-CCDC81_euk_2	PF18289.1	gi|289596099|ref|YP_003482795.1|	-	0.0011	19.0	0.1	0.0015	18.6	0.1	1.2	1	0	0	1	1	1	1	CCDC81	eukaryotic	HU	domain	2
HU-CCDC81_euk_1	PF14908.6	gi|289596099|ref|YP_003482795.1|	-	0.0014	18.7	0.1	0.0016	18.6	0.1	1.2	1	0	0	1	1	1	1	CCDC81	eukaryotic	HU	domain	1
HU-DNA_bdg	PF14848.6	gi|289596099|ref|YP_003482795.1|	-	0.07	13.1	0.3	0.1	12.6	0.3	1.4	1	1	0	1	1	1	0	DNA-binding	domain
AA_kinase	PF00696.28	gi|289596100|ref|YP_003482796.1|	-	5.7e-45	153.8	0.0	6.5e-45	153.6	0.0	1.0	1	0	0	1	1	1	1	Amino	acid	kinase	family
CelTOS	PF18659.1	gi|289596100|ref|YP_003482796.1|	-	0.17	12.3	2.8	0.43	11.0	0.0	2.7	3	1	1	4	4	4	0	Cell-traversal	protein	for	ookinetes	and	sporozoites
Peptidase_M32	PF02074.15	gi|289596102|ref|YP_003482798.1|	-	3.3e-164	547.3	0.0	3.8e-164	547.1	0.0	1.0	1	0	0	1	1	1	1	Carboxypeptidase	Taq	(M32)	metallopeptidase
Aminotran_1_2	PF00155.21	gi|289596103|ref|YP_003482799.1|	-	9.4e-64	215.9	0.0	1.1e-63	215.7	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
DegT_DnrJ_EryC1	PF01041.17	gi|289596103|ref|YP_003482799.1|	-	8.4e-07	28.6	0.0	1.2e-06	28.1	0.0	1.2	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_5	PF00266.19	gi|289596103|ref|YP_003482799.1|	-	6.2e-06	25.4	0.0	9.1e-06	24.9	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.21	gi|289596103|ref|YP_003482799.1|	-	0.0001	21.7	0.0	0.00015	21.2	0.0	1.2	1	0	0	1	1	1	1	Beta-eliminating	lyase
Cys_Met_Meta_PP	PF01053.20	gi|289596103|ref|YP_003482799.1|	-	0.13	10.8	0.0	0.19	10.2	0.0	1.2	1	0	0	1	1	1	0	Cys/Met	metabolism	PLP-dependent	enzyme
AFOR_C	PF01314.18	gi|289596104|ref|YP_003482800.1|	-	4.8e-129	430.7	0.1	5.9e-129	430.4	0.1	1.1	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	domains	2	&	3
AFOR_N	PF02730.15	gi|289596104|ref|YP_003482800.1|	-	7e-69	231.7	0.5	1e-68	231.1	0.5	1.2	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
Amidinotransf	PF02274.17	gi|289596105|ref|YP_003482801.1|	-	4.9e-25	88.3	0.0	9.4e-20	71.0	0.0	2.9	1	1	1	2	2	2	2	Amidinotransferase
tRNA-synt_1e	PF01406.19	gi|289596106|ref|YP_003482802.1|	-	2.3e-131	437.6	0.0	3.3e-131	437.1	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1g	PF09334.11	gi|289596106|ref|YP_003482802.1|	-	2.3e-14	53.0	1.1	3.2e-08	32.7	0.2	2.1	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(M)
tRNA-synt_1	PF00133.22	gi|289596106|ref|YP_003482802.1|	-	4e-07	28.7	0.0	5.6e-06	24.9	0.0	2.2	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1f	PF01921.18	gi|289596106|ref|YP_003482802.1|	-	1.5e-06	27.4	0.8	2.8e-05	23.2	0.2	2.6	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(K)
DALR_2	PF09190.11	gi|289596106|ref|YP_003482802.1|	-	0.00099	19.5	0.6	0.0027	18.2	0.6	1.8	1	0	0	1	1	1	1	DALR	domain
tRNA-synt_1d	PF00750.19	gi|289596106|ref|YP_003482802.1|	-	0.0039	16.2	0.3	0.011	14.7	0.0	1.8	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(R)
Rad51	PF08423.11	gi|289596107|ref|YP_003482803.1|	-	9.9e-90	300.2	0.0	1.2e-89	299.9	0.0	1.0	1	0	0	1	1	1	1	Rad51
RecA	PF00154.21	gi|289596107|ref|YP_003482803.1|	-	2.8e-14	53.2	0.1	3.8e-14	52.8	0.1	1.1	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
HHH_5	PF14520.6	gi|289596107|ref|YP_003482803.1|	-	4.7e-13	49.5	0.3	1.3e-12	48.1	0.3	1.8	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
ATPase	PF06745.13	gi|289596107|ref|YP_003482803.1|	-	2.9e-07	30.1	0.0	5.7e-07	29.1	0.0	1.5	1	0	0	1	1	1	1	KaiC
HHH	PF00633.23	gi|289596107|ref|YP_003482803.1|	-	4.9e-06	26.1	1.1	0.0045	16.8	0.0	2.5	2	0	0	2	2	2	2	Helix-hairpin-helix	motif
AAA_25	PF13481.6	gi|289596107|ref|YP_003482803.1|	-	5.4e-06	26.1	0.0	7.6e-06	25.6	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
Cdd1	PF11731.8	gi|289596107|ref|YP_003482803.1|	-	3.6e-05	23.9	0.0	7.2e-05	23.0	0.0	1.6	1	0	0	1	1	1	1	Pathogenicity	locus
HHH_2	PF12826.7	gi|289596107|ref|YP_003482803.1|	-	5e-05	23.3	0.0	0.00015	21.8	0.0	1.8	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_8	PF14716.6	gi|289596107|ref|YP_003482803.1|	-	0.0014	18.9	1.2	0.22	11.9	0.1	2.8	3	0	0	3	3	2	1	Helix-hairpin-helix	domain
DNA_pol_lambd_f	PF10391.9	gi|289596107|ref|YP_003482803.1|	-	0.0021	17.8	0.0	0.014	15.2	0.0	2.3	2	0	0	2	2	2	1	Fingers	domain	of	DNA	polymerase	lambda
HHH_3	PF12836.7	gi|289596107|ref|YP_003482803.1|	-	0.0076	16.5	0.0	1.8	8.9	0.0	2.8	3	0	0	3	3	2	1	Helix-hairpin-helix	motif
SRP54	PF00448.22	gi|289596107|ref|YP_003482803.1|	-	0.0078	15.9	0.0	0.012	15.3	0.0	1.3	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
ATPase_2	PF01637.18	gi|289596107|ref|YP_003482803.1|	-	0.026	14.4	0.0	0.04	13.8	0.0	1.3	1	0	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
AAA_22	PF13401.6	gi|289596107|ref|YP_003482803.1|	-	0.027	14.7	0.0	0.052	13.8	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
DUF2520	PF10728.9	gi|289596107|ref|YP_003482803.1|	-	0.029	14.1	0.1	0.047	13.4	0.1	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF2520)
IMS_HHH	PF11798.8	gi|289596107|ref|YP_003482803.1|	-	0.041	14.2	0.0	0.15	12.5	0.0	2.0	1	0	0	1	1	1	0	IMS	family	HHH	motif
ABC_tran	PF00005.27	gi|289596107|ref|YP_003482803.1|	-	0.061	13.8	0.0	3.2	8.3	0.0	2.3	1	1	1	2	2	2	0	ABC	transporter
SoPB_HTH	PF18090.1	gi|289596107|ref|YP_003482803.1|	-	0.07	13.3	0.1	0.93	9.7	0.0	2.7	3	0	0	3	3	3	0	Centromere-binding	protein	HTH	domain
GP70	PF17429.2	gi|289596107|ref|YP_003482803.1|	-	0.089	12.6	0.0	0.24	11.2	0.0	1.7	1	0	0	1	1	1	0	Gene	product	70
AAA_24	PF13479.6	gi|289596107|ref|YP_003482803.1|	-	0.11	12.2	0.0	0.21	11.3	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Gp_dh_C	PF02800.20	gi|289596108|ref|YP_003482804.1|	-	9.4e-67	223.5	0.0	1.7e-66	222.7	0.0	1.4	1	0	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
Gp_dh_N	PF00044.24	gi|289596108|ref|YP_003482804.1|	-	4.3e-39	132.9	0.0	9.2e-39	131.9	0.0	1.6	1	0	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
ADH_zinc_N	PF00107.26	gi|289596108|ref|YP_003482804.1|	-	0.0079	16.2	0.0	0.015	15.3	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
FBPase_3	PF01950.16	gi|289596109|ref|YP_003482805.1|	-	5.7e-191	634.4	0.0	6.4e-191	634.2	0.0	1.0	1	0	0	1	1	1	1	Fructose-1,6-bisphosphatase
FeoA	PF04023.14	gi|289596110|ref|YP_003482806.1|	-	2.3e-26	91.9	0.5	3.4e-18	65.7	0.2	2.0	2	0	0	2	2	2	2	FeoA	domain
FeoB_N	PF02421.18	gi|289596111|ref|YP_003482807.1|	-	4.3e-66	221.3	0.4	6.3e-66	220.7	0.4	1.3	1	0	0	1	1	1	1	Ferrous	iron	transport	protein	B
Gate	PF07670.14	gi|289596111|ref|YP_003482807.1|	-	9.5e-39	132.1	16.2	2.4e-24	85.8	5.4	3.1	2	1	0	2	2	2	2	Nucleoside	recognition
MMR_HSR1	PF01926.23	gi|289596111|ref|YP_003482807.1|	-	1.4e-19	70.3	0.1	2.5e-19	69.4	0.1	1.4	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
FeoB_C	PF07664.12	gi|289596111|ref|YP_003482807.1|	-	1e-18	66.7	2.6	1e-18	66.7	2.6	3.0	3	0	0	3	3	3	1	Ferrous	iron	transport	protein	B	C	terminus
FeoB_Cyto	PF17910.1	gi|289596111|ref|YP_003482807.1|	-	2.2e-17	63.4	0.6	3.7e-17	62.6	0.6	1.4	1	0	0	1	1	1	1	FeoB	cytosolic	helical	domain
AIG1	PF04548.16	gi|289596111|ref|YP_003482807.1|	-	6.2e-05	22.4	0.0	0.0001	21.7	0.0	1.4	1	0	0	1	1	1	1	AIG1	family
GTP_EFTU	PF00009.27	gi|289596111|ref|YP_003482807.1|	-	0.00045	19.8	0.2	0.0042	16.6	0.2	2.3	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
SRPRB	PF09439.10	gi|289596111|ref|YP_003482807.1|	-	0.00071	19.1	0.0	0.0013	18.2	0.0	1.4	1	0	0	1	1	1	1	Signal	recognition	particle	receptor	beta	subunit
Dynamin_N	PF00350.23	gi|289596111|ref|YP_003482807.1|	-	0.0011	19.1	0.1	0.53	10.3	0.0	2.3	2	0	0	2	2	2	2	Dynamin	family
AAA_23	PF13476.6	gi|289596111|ref|YP_003482807.1|	-	0.1	13.1	0.2	0.23	11.9	0.2	1.5	1	1	0	1	1	1	0	AAA	domain
ABC_tran	PF00005.27	gi|289596111|ref|YP_003482807.1|	-	0.15	12.6	0.1	0.26	11.8	0.1	1.5	1	1	0	1	1	1	0	ABC	transporter
CD20	PF04103.15	gi|289596112|ref|YP_003482808.1|	-	1.7	8.7	8.4	13	5.9	8.4	2.0	1	1	0	1	1	1	0	CD20-like	family
FeoC	PF09012.10	gi|289596113|ref|YP_003482809.1|	-	1.8e-07	31.2	0.0	2.3e-07	30.8	0.0	1.2	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
HTH_27	PF13463.6	gi|289596113|ref|YP_003482809.1|	-	3.1e-06	27.6	0.0	9.5e-06	26.0	0.0	1.7	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_45	PF14947.6	gi|289596113|ref|YP_003482809.1|	-	1.7e-05	24.7	0.3	6e-05	23.0	0.3	1.7	1	1	0	1	1	1	1	Winged	helix-turn-helix
GerE	PF00196.19	gi|289596113|ref|YP_003482809.1|	-	0.0015	18.1	0.0	0.0021	17.5	0.0	1.2	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	luxR	family
Fe_dep_repress	PF01325.19	gi|289596113|ref|YP_003482809.1|	-	0.002	18.3	0.7	0.0038	17.4	0.1	1.8	2	1	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
MarR	PF01047.22	gi|289596113|ref|YP_003482809.1|	-	0.0048	16.8	0.0	0.0068	16.3	0.0	1.2	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.7	gi|289596113|ref|YP_003482809.1|	-	0.0074	16.2	0.0	0.0086	15.9	0.0	1.1	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.6	gi|289596113|ref|YP_003482809.1|	-	0.008	15.7	0.0	0.013	15.0	0.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.19	gi|289596113|ref|YP_003482809.1|	-	0.017	15.0	0.0	0.022	14.6	0.0	1.3	1	1	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_40	PF14493.6	gi|289596113|ref|YP_003482809.1|	-	0.042	14.3	0.0	0.053	14.0	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.12	gi|289596113|ref|YP_003482809.1|	-	0.043	13.5	0.1	0.062	13.0	0.1	1.3	1	0	0	1	1	1	0	Sigma-70,	region	4
DUF1495	PF07381.11	gi|289596113|ref|YP_003482809.1|	-	0.051	13.4	0.1	1.5	8.7	0.0	2.1	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain	(DUF1495)
HTH_29	PF13551.6	gi|289596113|ref|YP_003482809.1|	-	0.075	13.1	0.0	0.092	12.8	0.0	1.2	1	0	0	1	1	1	0	Winged	helix-turn	helix
HTH_38	PF13936.6	gi|289596113|ref|YP_003482809.1|	-	0.08	12.7	1.9	0.093	12.5	0.0	2.0	3	0	0	3	3	3	0	Helix-turn-helix	domain
Metallophos_2	PF12850.7	gi|289596114|ref|YP_003482810.1|	-	8e-32	110.7	0.0	9e-32	110.5	0.0	1.0	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.28	gi|289596114|ref|YP_003482810.1|	-	1.1e-05	26.0	3.3	0.00036	21.1	0.6	2.3	1	1	1	2	2	2	2	Calcineurin-like	phosphoesterase
Metallophos_3	PF14582.6	gi|289596114|ref|YP_003482810.1|	-	0.0037	16.6	0.0	0.11	11.7	0.0	2.0	2	0	0	2	2	2	2	Metallophosphoesterase,	calcineurin	superfamily
DUF835	PF05763.12	gi|289596116|ref|YP_003482812.1|	-	1.1e-36	125.5	3.5	2.5e-36	124.4	3.5	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF835)
GvpD	PF07088.11	gi|289596117|ref|YP_003482813.1|	-	3.8e-29	101.7	0.0	6e-29	101.0	0.0	1.3	1	0	0	1	1	1	1	GvpD	gas	vesicle	protein
ATPase	PF06745.13	gi|289596117|ref|YP_003482813.1|	-	1.3e-12	47.6	0.0	1.2e-11	44.4	0.0	2.1	1	1	0	1	1	1	1	KaiC
DUF2075	PF09848.9	gi|289596117|ref|YP_003482813.1|	-	2.5e-05	23.7	0.0	3.8e-05	23.1	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
NACHT	PF05729.12	gi|289596117|ref|YP_003482813.1|	-	0.00052	20.0	0.0	0.017	15.1	0.0	2.5	2	1	0	2	2	2	1	NACHT	domain
AAA_22	PF13401.6	gi|289596117|ref|YP_003482813.1|	-	0.0007	19.9	0.0	0.0023	18.2	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
TIP49	PF06068.13	gi|289596117|ref|YP_003482813.1|	-	0.0012	18.1	0.1	0.0021	17.4	0.1	1.3	1	0	0	1	1	1	1	TIP49	P-loop	domain
AAA_16	PF13191.6	gi|289596117|ref|YP_003482813.1|	-	0.0019	18.6	0.0	0.0033	17.8	0.0	1.4	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_5	PF07728.14	gi|289596117|ref|YP_003482813.1|	-	0.0057	16.7	0.0	0.01	15.9	0.0	1.5	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA	PF00004.29	gi|289596117|ref|YP_003482813.1|	-	0.0063	16.9	0.2	0.017	15.5	0.2	1.8	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Mg_chelatase	PF01078.21	gi|289596117|ref|YP_003482813.1|	-	0.0076	15.7	0.0	0.012	15.0	0.0	1.2	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
AAA_11	PF13086.6	gi|289596117|ref|YP_003482813.1|	-	0.012	15.5	0.0	0.028	14.2	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
Pox_A32	PF04665.12	gi|289596117|ref|YP_003482813.1|	-	0.013	15.0	0.0	0.026	14.0	0.0	1.5	1	0	0	1	1	1	0	Poxvirus	A32	protein
AAA_24	PF13479.6	gi|289596117|ref|YP_003482813.1|	-	0.015	15.0	0.1	0.095	12.4	0.3	2.4	2	1	0	2	2	2	0	AAA	domain
AAA_33	PF13671.6	gi|289596117|ref|YP_003482813.1|	-	0.018	15.2	0.0	0.096	12.8	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
NTPase_1	PF03266.15	gi|289596117|ref|YP_003482813.1|	-	0.022	14.7	0.2	0.058	13.3	0.0	1.8	2	0	0	2	2	2	0	NTPase
KTI12	PF08433.10	gi|289596117|ref|YP_003482813.1|	-	0.025	14.1	0.0	0.053	13.0	0.0	1.5	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
NB-ARC	PF00931.22	gi|289596117|ref|YP_003482813.1|	-	0.026	13.7	0.0	0.044	13.0	0.0	1.4	1	0	0	1	1	1	0	NB-ARC	domain
DnaB_C	PF03796.15	gi|289596117|ref|YP_003482813.1|	-	0.03	13.7	0.0	0.055	12.8	0.0	1.4	1	0	0	1	1	1	0	DnaB-like	helicase	C	terminal	domain
AAA_18	PF13238.6	gi|289596117|ref|YP_003482813.1|	-	0.042	14.4	0.0	0.099	13.2	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
ResIII	PF04851.15	gi|289596117|ref|YP_003482813.1|	-	0.07	13.1	0.0	0.13	12.2	0.0	1.5	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
RNA_helicase	PF00910.22	gi|289596117|ref|YP_003482813.1|	-	0.079	13.4	0.0	0.18	12.2	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
G3P_antiterm	PF04309.12	gi|289596117|ref|YP_003482813.1|	-	0.08	12.4	0.0	2.4	7.6	0.0	2.7	2	1	0	2	2	2	0	Glycerol-3-phosphate	responsive	antiterminator
Prot_ATP_OB_N	PF17758.1	gi|289596117|ref|YP_003482813.1|	-	0.12	12.1	0.0	0.21	11.2	0.0	1.3	1	0	0	1	1	1	0	Proteasomal	ATPase	OB	N-terminal	domain
Viral_helicase1	PF01443.18	gi|289596117|ref|YP_003482813.1|	-	0.16	11.7	0.0	0.24	11.1	0.0	1.2	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
HTH_20	PF12840.7	gi|289596118|ref|YP_003482814.1|	-	1.3e-07	31.6	0.2	1.7e-07	31.2	0.2	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.19	gi|289596118|ref|YP_003482814.1|	-	0.0001	22.1	0.0	0.00017	21.4	0.0	1.4	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.6	gi|289596118|ref|YP_003482814.1|	-	0.00026	20.5	0.1	0.00061	19.3	0.1	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.7	gi|289596118|ref|YP_003482814.1|	-	0.0044	16.9	0.9	0.013	15.4	0.9	1.8	1	1	0	1	1	1	1	MarR	family
HTH_Crp_2	PF13545.6	gi|289596118|ref|YP_003482814.1|	-	0.01	15.8	0.0	0.015	15.2	0.0	1.3	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
DUF2250	PF10007.9	gi|289596118|ref|YP_003482814.1|	-	0.028	14.5	0.0	0.043	13.9	0.0	1.4	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_CodY	PF08222.11	gi|289596118|ref|YP_003482814.1|	-	0.04	13.5	0.0	0.061	12.9	0.0	1.3	1	0	0	1	1	1	0	CodY	helix-turn-helix	domain
HTH_IclR	PF09339.10	gi|289596118|ref|YP_003482814.1|	-	0.11	12.3	0.1	0.17	11.7	0.1	1.4	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_20	PF12840.7	gi|289596119|ref|YP_003482815.1|	-	1.6e-06	28.0	0.0	2.3e-06	27.6	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
PadR	PF03551.14	gi|289596119|ref|YP_003482815.1|	-	0.00048	20.0	0.1	0.00077	19.4	0.1	1.4	1	1	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
TrmB	PF01978.19	gi|289596119|ref|YP_003482815.1|	-	0.00049	19.9	0.1	0.00076	19.3	0.1	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
FUR	PF01475.19	gi|289596119|ref|YP_003482815.1|	-	0.00088	19.4	0.1	0.0011	19.1	0.1	1.3	1	0	0	1	1	1	1	Ferric	uptake	regulator	family
HTH_24	PF13412.6	gi|289596119|ref|YP_003482815.1|	-	0.0024	17.4	0.1	0.0055	16.2	0.1	1.7	1	1	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_5	PF01022.20	gi|289596119|ref|YP_003482815.1|	-	0.0037	17.1	0.0	0.007	16.2	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
DUF2250	PF10007.9	gi|289596119|ref|YP_003482815.1|	-	0.0063	16.6	0.9	0.009	16.1	0.7	1.4	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Rrf2	PF02082.20	gi|289596119|ref|YP_003482815.1|	-	0.028	14.8	0.1	0.037	14.4	0.1	1.4	1	0	0	1	1	1	0	Transcriptional	regulator
DUF4974	PF16344.5	gi|289596119|ref|YP_003482815.1|	-	0.13	12.3	2.9	0.65	10.0	0.1	2.6	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4974)
HTH_IclR	PF09339.10	gi|289596119|ref|YP_003482815.1|	-	0.16	11.8	0.1	0.32	10.8	0.0	1.5	2	0	0	2	2	2	0	IclR	helix-turn-helix	domain
MarR_2	PF12802.7	gi|289596119|ref|YP_003482815.1|	-	0.2	11.6	0.0	0.28	11.1	0.0	1.2	1	0	0	1	1	1	0	MarR	family
ATPase	PF06745.13	gi|289596121|ref|YP_003482817.1|	-	9.9e-49	165.8	0.1	1.2e-48	165.5	0.1	1.0	1	0	0	1	1	1	1	KaiC
GvpD	PF07088.11	gi|289596121|ref|YP_003482817.1|	-	1e-08	34.3	0.2	2e-08	33.3	0.2	1.4	1	1	0	1	1	1	1	GvpD	gas	vesicle	protein
DnaB_C	PF03796.15	gi|289596121|ref|YP_003482817.1|	-	5.6e-06	25.9	0.0	7.5e-06	25.5	0.0	1.2	1	0	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
AAA_25	PF13481.6	gi|289596121|ref|YP_003482817.1|	-	3.1e-05	23.6	0.0	7.7e-05	22.4	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
RecA	PF00154.21	gi|289596121|ref|YP_003482817.1|	-	0.00019	21.0	0.1	0.00029	20.4	0.1	1.2	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
CbiA	PF01656.23	gi|289596121|ref|YP_003482817.1|	-	0.00048	20.2	0.1	0.0015	18.6	0.1	1.7	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Rad51	PF08423.11	gi|289596121|ref|YP_003482817.1|	-	0.00093	18.5	0.0	0.0013	18.0	0.0	1.3	1	0	0	1	1	1	1	Rad51
AAA_24	PF13479.6	gi|289596121|ref|YP_003482817.1|	-	0.0011	18.7	1.6	0.022	14.5	0.8	2.3	2	1	0	2	2	2	1	AAA	domain
AAA_14	PF13173.6	gi|289596121|ref|YP_003482817.1|	-	0.0014	18.6	0.1	0.0046	17.0	0.1	1.9	1	1	0	1	1	1	1	AAA	domain
NACHT	PF05729.12	gi|289596121|ref|YP_003482817.1|	-	0.0035	17.3	0.1	0.0058	16.6	0.1	1.3	1	0	0	1	1	1	1	NACHT	domain
RNA_helicase	PF00910.22	gi|289596121|ref|YP_003482817.1|	-	0.0036	17.7	0.1	0.007	16.7	0.1	1.5	1	1	0	1	1	1	1	RNA	helicase
T2SSE	PF00437.20	gi|289596121|ref|YP_003482817.1|	-	0.0046	16.0	0.1	0.0072	15.4	0.1	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_22	PF13401.6	gi|289596121|ref|YP_003482817.1|	-	0.0059	16.9	0.0	0.0095	16.2	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
ATPase_2	PF01637.18	gi|289596121|ref|YP_003482817.1|	-	0.016	15.1	0.0	0.019	14.9	0.0	1.3	1	0	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
DUF2075	PF09848.9	gi|289596121|ref|YP_003482817.1|	-	0.017	14.4	0.0	0.023	14.0	0.0	1.1	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_18	PF13238.6	gi|289596121|ref|YP_003482817.1|	-	0.03	14.9	0.5	0.051	14.1	0.5	1.6	1	1	0	1	1	1	0	AAA	domain
AAA_29	PF13555.6	gi|289596121|ref|YP_003482817.1|	-	0.043	13.6	0.1	0.1	12.3	0.1	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.6	gi|289596121|ref|YP_003482817.1|	-	0.052	13.9	0.1	0.083	13.3	0.1	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
CobU	PF02283.16	gi|289596121|ref|YP_003482817.1|	-	0.058	13.0	0.0	0.12	11.9	0.0	1.5	1	0	0	1	1	1	0	Cobinamide	kinase	/	cobinamide	phosphate	guanyltransferase
TrwB_AAD_bind	PF10412.9	gi|289596121|ref|YP_003482817.1|	-	0.067	12.1	0.0	0.097	11.6	0.0	1.2	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
NB-ARC	PF00931.22	gi|289596121|ref|YP_003482817.1|	-	0.097	11.8	0.1	0.15	11.2	0.1	1.2	1	0	0	1	1	1	0	NB-ARC	domain
Zeta_toxin	PF06414.12	gi|289596121|ref|YP_003482817.1|	-	0.1	11.9	0.1	0.18	11.0	0.1	1.4	1	0	0	1	1	1	0	Zeta	toxin
IstB_IS21	PF01695.17	gi|289596121|ref|YP_003482817.1|	-	0.16	11.7	0.1	0.52	10.0	0.0	1.7	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
SAICAR_synt	PF01259.18	gi|289596122|ref|YP_003482818.1|	-	6.3e-47	160.3	0.1	8.4e-47	159.9	0.1	1.1	1	0	0	1	1	1	1	SAICAR	synthetase
CCDC53	PF10152.9	gi|289596123|ref|YP_003482819.1|	-	0.0024	18.3	0.1	0.0025	18.2	0.1	1.0	1	0	0	1	1	1	1	Subunit	CCDC53	of	WASH	complex
EzrA	PF06160.12	gi|289596123|ref|YP_003482819.1|	-	0.0051	15.1	0.6	0.0054	15.0	0.6	1.0	1	0	0	1	1	1	1	Septation	ring	formation	regulator,	EzrA
FlaC_arch	PF05377.11	gi|289596123|ref|YP_003482819.1|	-	0.0085	16.5	0.2	0.01	16.2	0.2	1.1	1	0	0	1	1	1	1	Flagella	accessory	protein	C	(FlaC)
DUF4618	PF15397.6	gi|289596123|ref|YP_003482819.1|	-	0.0097	15.4	0.3	0.01	15.3	0.3	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4618)
Macoilin	PF09726.9	gi|289596123|ref|YP_003482819.1|	-	0.015	13.9	0.5	0.017	13.8	0.5	1.0	1	0	0	1	1	1	0	Macoilin	family
XhlA	PF10779.9	gi|289596123|ref|YP_003482819.1|	-	0.022	14.9	0.6	0.027	14.7	0.6	1.1	1	0	0	1	1	1	0	Haemolysin	XhlA
AIP3	PF03915.13	gi|289596123|ref|YP_003482819.1|	-	0.037	13.1	0.3	0.039	13.1	0.3	1.0	1	0	0	1	1	1	0	Actin	interacting	protein	3
TSC22	PF01166.18	gi|289596123|ref|YP_003482819.1|	-	0.04	14.2	0.2	0.051	13.9	0.2	1.2	1	0	0	1	1	1	0	TSC-22/dip/bun	family
GP41	PF00517.17	gi|289596123|ref|YP_003482819.1|	-	0.047	13.6	0.2	0.047	13.6	0.2	1.1	1	0	0	1	1	1	0	Retroviral	envelope	protein
Prefoldin	PF02996.17	gi|289596123|ref|YP_003482819.1|	-	0.047	13.6	0.2	0.058	13.3	0.2	1.0	1	0	0	1	1	1	0	Prefoldin	subunit
Paralemmin	PF03285.15	gi|289596123|ref|YP_003482819.1|	-	0.06	12.9	0.2	0.06	12.9	0.2	1.0	1	0	0	1	1	1	0	Paralemmin
Fib_alpha	PF08702.10	gi|289596123|ref|YP_003482819.1|	-	0.074	13.2	0.2	0.088	13.0	0.2	1.0	1	0	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
DLP_helical	PF18709.1	gi|289596123|ref|YP_003482819.1|	-	0.088	12.0	0.2	0.098	11.8	0.2	1.0	1	0	0	1	1	1	0	Dynamin-like	helical	domain
DUF4988	PF16378.5	gi|289596123|ref|YP_003482819.1|	-	0.12	12.0	0.4	0.12	12.1	0.4	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function
DUF4064	PF13273.6	gi|289596124|ref|YP_003482820.1|	-	2.5e-09	37.4	17.7	2.5e-09	37.4	17.7	2.6	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF4064)
DUF973	PF06157.11	gi|289596124|ref|YP_003482820.1|	-	0.0024	17.0	9.5	0.0036	16.4	9.5	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
DUF308	PF03729.13	gi|289596124|ref|YP_003482820.1|	-	0.0035	17.6	9.2	0.0035	17.6	9.2	3.3	1	1	2	3	3	3	1	Short	repeat	of	unknown	function	(DUF308)
Rhomboid	PF01694.22	gi|289596124|ref|YP_003482820.1|	-	0.15	12.1	12.4	0.55	10.2	12.4	1.7	1	1	0	1	1	1	0	Rhomboid	family
Phage_holin_3_6	PF07332.11	gi|289596124|ref|YP_003482820.1|	-	0.93	9.5	23.0	0.22	11.6	8.1	2.1	1	1	1	2	2	2	0	Putative	Actinobacterial	Holin-X,	holin	superfamily	III
Tetraspanin	PF00335.20	gi|289596124|ref|YP_003482820.1|	-	1.6	8.4	12.2	2.2	7.9	12.2	1.1	1	0	0	1	1	1	0	Tetraspanin	family
PMP22_Claudin	PF00822.20	gi|289596124|ref|YP_003482820.1|	-	2.8	7.8	14.1	0.12	12.2	4.2	2.5	1	1	0	1	1	1	0	PMP-22/EMP/MP20/Claudin	family
EbsA	PF17255.2	gi|289596124|ref|YP_003482820.1|	-	2.9	8.2	14.1	0.26	11.6	2.5	2.7	2	1	1	3	3	3	0	EbsA-like	protein
ResB	PF05140.14	gi|289596124|ref|YP_003482820.1|	-	3.7	6.2	4.1	1	8.0	0.8	1.7	1	1	1	2	2	2	0	ResB-like	family
DUF4231	PF14015.6	gi|289596124|ref|YP_003482820.1|	-	6	7.4	11.7	0.94	10.0	2.7	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4231)
DUF3169	PF11368.8	gi|289596124|ref|YP_003482820.1|	-	7.7	5.9	16.1	0.17	11.3	7.9	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3169)
MotA_ExbB	PF01618.16	gi|289596124|ref|YP_003482820.1|	-	7.9	6.3	11.2	4.7	7.0	2.7	2.2	2	0	0	2	2	2	0	MotA/TolQ/ExbB	proton	channel	family
DUF2070	PF09843.9	gi|289596124|ref|YP_003482820.1|	-	8.2	4.6	8.4	9.4	4.4	8.4	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
PrsW-protease	PF13367.6	gi|289596125|ref|YP_003482821.1|	-	1.2e-39	135.8	9.9	1.6e-39	135.4	9.9	1.1	1	0	0	1	1	1	1	PrsW	family	intramembrane	metalloprotease
Pcc1	PF09341.10	gi|289596126|ref|YP_003482822.1|	-	0.00014	22.0	0.0	0.00021	21.3	0.0	1.3	1	1	0	1	1	1	1	Transcription	factor	Pcc1
HD	PF01966.22	gi|289596127|ref|YP_003482823.1|	-	2e-13	50.7	0.9	3.9e-13	49.7	0.9	1.5	1	0	0	1	1	1	1	HD	domain
tRNA_anti-codon	PF01336.25	gi|289596127|ref|YP_003482823.1|	-	9.6e-05	22.3	0.3	0.00019	21.3	0.3	1.5	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
HDOD	PF08668.12	gi|289596127|ref|YP_003482823.1|	-	0.0067	15.9	0.0	0.013	15.0	0.0	1.4	1	0	0	1	1	1	1	HDOD	domain
HD_6	PF18019.1	gi|289596127|ref|YP_003482823.1|	-	0.0084	16.3	0.0	0.019	15.1	0.0	1.5	1	1	0	1	1	1	1	HD	domain
DUF2524	PF10732.9	gi|289596127|ref|YP_003482823.1|	-	0.029	14.7	0.0	0.06	13.7	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2524)
MitMem_reg	PF13012.6	gi|289596127|ref|YP_003482823.1|	-	0.12	12.8	0.1	4.5	7.7	0.0	2.4	1	1	0	2	2	2	0	Maintenance	of	mitochondrial	structure	and	function
Mob1_phocein	PF03637.17	gi|289596127|ref|YP_003482823.1|	-	0.14	12.2	0.0	0.24	11.4	0.0	1.3	1	0	0	1	1	1	0	Mob1/phocein	family
DUF998	PF06197.13	gi|289596128|ref|YP_003482824.1|	-	1.3	8.6	6.9	30	4.2	6.9	2.2	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF998)
Peptidase_M24	PF00557.24	gi|289596129|ref|YP_003482825.1|	-	2.4e-67	226.7	0.9	3e-67	226.3	0.9	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.18	gi|289596129|ref|YP_003482825.1|	-	3.6e-10	40.6	0.0	6.6e-10	39.7	0.0	1.4	1	0	0	1	1	1	1	Creatinase/Prolidase	N-terminal	domain
PIN_9	PF18477.1	gi|289596129|ref|YP_003482825.1|	-	0.009	16.3	0.8	0.2	12.0	0.2	2.4	2	0	0	2	2	2	1	PIN	like	domain
DUF998	PF06197.13	gi|289596130|ref|YP_003482826.1|	-	2.5e-16	59.8	20.3	3e-16	59.6	20.3	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF998)
Fig1	PF12351.8	gi|289596130|ref|YP_003482826.1|	-	1.6	8.6	8.8	5.3	6.9	8.8	1.9	1	1	0	1	1	1	0	Ca2+	regulator	and	membrane	fusion	protein	Fig1
UPF0029	PF01205.19	gi|289596131|ref|YP_003482827.1|	-	5.3e-25	87.8	0.2	6.1e-25	87.6	0.2	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	family	UPF0029
Endonuclease_5	PF04493.14	gi|289596132|ref|YP_003482828.1|	-	3.2e-48	164.0	0.1	5.1e-48	163.4	0.1	1.3	1	0	0	1	1	1	1	Endonuclease	V
DNA_binding_1	PF01035.20	gi|289596132|ref|YP_003482828.1|	-	3e-25	88.1	0.0	8e-25	86.8	0.0	1.7	1	0	0	1	1	1	1	6-O-methylguanine	DNA	methyltransferase,	DNA	binding	domain
DUF99	PF01949.16	gi|289596132|ref|YP_003482828.1|	-	0.0011	18.4	0.0	0.0022	17.5	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF99
Thymidylate_kin	PF02223.17	gi|289596133|ref|YP_003482829.1|	-	1.2e-42	145.7	0.0	1.4e-42	145.5	0.0	1.0	1	0	0	1	1	1	1	Thymidylate	kinase
AAA_28	PF13521.6	gi|289596133|ref|YP_003482829.1|	-	1.2e-09	38.6	0.0	1.4e-09	38.4	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
dNK	PF01712.19	gi|289596133|ref|YP_003482829.1|	-	2.7e-07	30.6	0.0	3.5e-07	30.3	0.0	1.1	1	0	0	1	1	1	1	Deoxynucleoside	kinase
AAA_18	PF13238.6	gi|289596133|ref|YP_003482829.1|	-	6.9e-06	26.6	0.1	2e-05	25.1	0.0	1.7	1	1	0	2	2	2	1	AAA	domain
KTI12	PF08433.10	gi|289596133|ref|YP_003482829.1|	-	1.9e-05	24.3	0.0	3.1e-05	23.6	0.0	1.3	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
AAA_33	PF13671.6	gi|289596133|ref|YP_003482829.1|	-	0.00018	21.7	0.0	0.00028	21.1	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
APS_kinase	PF01583.20	gi|289596133|ref|YP_003482829.1|	-	0.0032	17.4	0.0	0.0092	15.9	0.0	1.8	2	0	0	2	2	2	1	Adenylylsulphate	kinase
SKI	PF01202.22	gi|289596133|ref|YP_003482829.1|	-	0.011	15.9	0.5	0.08	13.1	0.1	2.3	2	1	0	2	2	2	0	Shikimate	kinase
NB-ARC	PF00931.22	gi|289596133|ref|YP_003482829.1|	-	0.011	14.9	0.0	0.018	14.2	0.0	1.4	1	0	0	1	1	1	0	NB-ARC	domain
PRK	PF00485.18	gi|289596133|ref|YP_003482829.1|	-	0.024	14.4	0.0	0.037	13.8	0.0	1.3	1	1	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
MMR_HSR1	PF01926.23	gi|289596133|ref|YP_003482829.1|	-	0.025	14.7	0.3	0.82	9.8	0.0	2.6	2	1	1	3	3	3	0	50S	ribosome-binding	GTPase
AAA_17	PF13207.6	gi|289596133|ref|YP_003482829.1|	-	0.025	15.0	0.1	0.19	12.2	0.0	2.5	1	1	0	1	1	1	0	AAA	domain
Mg_chelatase	PF01078.21	gi|289596133|ref|YP_003482829.1|	-	0.033	13.6	0.0	0.34	10.2	0.0	2.0	1	1	1	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
AAA	PF00004.29	gi|289596133|ref|YP_003482829.1|	-	0.036	14.5	0.0	0.075	13.5	0.0	1.6	2	0	0	2	2	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.6	gi|289596133|ref|YP_003482829.1|	-	0.044	14.1	0.1	0.28	11.5	0.0	2.1	2	1	0	2	2	2	0	AAA	domain
ABC_tran	PF00005.27	gi|289596133|ref|YP_003482829.1|	-	0.047	14.2	0.0	0.061	13.8	0.0	1.4	1	1	0	1	1	1	0	ABC	transporter
AAA_14	PF13173.6	gi|289596133|ref|YP_003482829.1|	-	0.068	13.2	1.1	1.1	9.3	0.0	2.2	2	1	0	2	2	2	0	AAA	domain
PPK2	PF03976.14	gi|289596133|ref|YP_003482829.1|	-	0.069	12.7	0.1	0.14	11.6	0.0	1.7	2	1	0	2	2	2	0	Polyphosphate	kinase	2	(PPK2)
RNA_helicase	PF00910.22	gi|289596133|ref|YP_003482829.1|	-	0.097	13.1	0.0	0.18	12.2	0.0	1.5	1	0	0	1	1	1	0	RNA	helicase
CPT	PF07931.12	gi|289596133|ref|YP_003482829.1|	-	0.11	12.4	0.0	0.16	11.8	0.0	1.3	1	0	0	1	1	1	0	Chloramphenicol	phosphotransferase-like	protein
T2SSE	PF00437.20	gi|289596133|ref|YP_003482829.1|	-	0.14	11.2	0.2	5.9	5.9	0.0	2.2	1	1	0	2	2	2	0	Type	II/IV	secretion	system	protein
NACHT	PF05729.12	gi|289596133|ref|YP_003482829.1|	-	0.17	11.8	0.0	0.37	10.7	0.0	1.5	2	0	0	2	2	1	0	NACHT	domain
RraA-like	PF03737.15	gi|289596134|ref|YP_003482830.1|	-	5.2e-40	137.0	2.4	5.2e-40	137.0	2.4	2.0	2	1	0	2	2	2	1	Aldolase/RraA
OMPdecase	PF00215.24	gi|289596134|ref|YP_003482830.1|	-	5.1e-28	98.2	5.3	5.1e-28	98.2	5.3	1.9	2	1	0	2	2	2	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
His_biosynth	PF00977.21	gi|289596134|ref|YP_003482830.1|	-	1.9e-08	34.1	4.3	1.2e-07	31.5	0.7	2.3	1	1	1	2	2	2	1	Histidine	biosynthesis	protein
ADH_zinc_N	PF00107.26	gi|289596134|ref|YP_003482830.1|	-	1.2e-07	31.7	4.2	3.2e-05	23.9	0.3	2.9	2	1	1	3	3	3	2	Zinc-binding	dehydrogenase
TMP-TENI	PF02581.17	gi|289596134|ref|YP_003482830.1|	-	1.3e-07	31.1	3.0	5.6e-07	29.1	3.0	2.2	1	1	0	1	1	1	1	Thiamine	monophosphate	synthase
NMO	PF03060.15	gi|289596134|ref|YP_003482830.1|	-	5.9e-07	29.2	2.7	1.8e-06	27.6	3.2	1.6	2	0	0	2	2	2	1	Nitronate	monooxygenase
Trp_syntA	PF00290.20	gi|289596134|ref|YP_003482830.1|	-	1e-05	24.5	4.2	0.0004	19.3	2.0	2.5	2	1	0	2	2	2	1	Tryptophan	synthase	alpha	chain
Dus	PF01207.17	gi|289596134|ref|YP_003482830.1|	-	1.2e-05	24.5	0.1	2e-05	23.8	0.1	1.3	1	0	0	1	1	1	1	Dihydrouridine	synthase	(Dus)
NanE	PF04131.14	gi|289596134|ref|YP_003482830.1|	-	3.1e-05	23.3	1.5	9.1e-05	21.7	1.2	2.0	1	1	1	2	2	2	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
ThiG	PF05690.14	gi|289596134|ref|YP_003482830.1|	-	0.00017	21.0	1.4	0.0003	20.2	1.4	1.4	1	0	0	1	1	1	1	Thiazole	biosynthesis	protein	ThiG
IGPS	PF00218.21	gi|289596134|ref|YP_003482830.1|	-	0.00024	20.3	0.7	0.00041	19.6	0.7	1.3	1	0	0	1	1	1	1	Indole-3-glycerol	phosphate	synthase
HMGL-like	PF00682.19	gi|289596134|ref|YP_003482830.1|	-	0.00029	20.5	3.7	0.00064	19.4	0.5	2.2	1	1	1	2	2	2	1	HMGL-like
PEP_mutase	PF13714.6	gi|289596134|ref|YP_003482830.1|	-	0.002	17.6	2.7	0.065	12.7	0.3	2.8	1	1	2	3	3	3	1	Phosphoenolpyruvate	phosphomutase
Ribul_P_3_epim	PF00834.19	gi|289596134|ref|YP_003482830.1|	-	0.0037	16.7	2.6	0.013	14.9	2.6	2.2	1	1	0	1	1	1	1	Ribulose-phosphate	3	epimerase	family
PdxJ	PF03740.13	gi|289596134|ref|YP_003482830.1|	-	0.0059	15.7	0.1	0.12	11.4	0.0	2.9	2	1	0	2	2	2	1	Pyridoxal	phosphate	biosynthesis	protein	PdxJ
FMN_dh	PF01070.18	gi|289596134|ref|YP_003482830.1|	-	0.0075	15.3	3.8	0.012	14.6	3.8	1.3	1	0	0	1	1	1	1	FMN-dependent	dehydrogenase
Glycos_transf_1	PF00534.20	gi|289596134|ref|YP_003482830.1|	-	0.028	14.0	0.8	0.063	12.8	0.3	1.8	2	0	0	2	2	2	0	Glycosyl	transferases	group	1
Oxidored_FMN	PF00724.20	gi|289596134|ref|YP_003482830.1|	-	0.037	13.3	0.1	0.19	11.0	0.1	1.9	1	1	1	2	2	2	0	NADH:flavin	oxidoreductase	/	NADH	oxidase	family
Peripla_BP_6	PF13458.6	gi|289596134|ref|YP_003482830.1|	-	0.043	13.5	3.0	0.097	12.3	0.3	2.4	2	1	0	3	3	3	0	Periplasmic	binding	protein
PEP_hydrolase	PF09370.10	gi|289596134|ref|YP_003482830.1|	-	0.05	12.8	0.8	0.21	10.7	0.5	2.2	2	1	0	2	2	2	0	Phosphoenolpyruvate	hydrolase-like
DUF561	PF04481.12	gi|289596134|ref|YP_003482830.1|	-	0.081	12.1	6.2	0.16	11.2	0.9	2.9	2	1	0	3	3	3	0	Protein	of	unknown	function	(DUF561)
QRPTase_C	PF01729.19	gi|289596134|ref|YP_003482830.1|	-	0.13	12.1	3.5	0.16	11.7	0.3	2.6	1	1	3	4	4	4	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
DUF4358	PF14270.6	gi|289596134|ref|YP_003482830.1|	-	0.15	12.3	5.0	0.66	10.3	0.2	2.8	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4358)
DUF1611_N	PF17396.2	gi|289596134|ref|YP_003482830.1|	-	0.48	10.7	6.4	0.59	10.4	1.3	3.4	3	1	0	3	3	2	0	Domain	of	unknown	function	(DUF1611_N)	Rossmann-like	domain
Rubrerythrin	PF02915.17	gi|289596135|ref|YP_003482831.1|	-	2.8e-21	76.3	18.6	2.2e-16	60.5	7.4	2.0	1	1	1	2	2	2	2	Rubrerythrin
DUF2383	PF09537.10	gi|289596135|ref|YP_003482831.1|	-	6.4e-07	29.7	1.6	0.013	15.8	0.3	2.2	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF2383)
Ferritin_2	PF13668.6	gi|289596135|ref|YP_003482831.1|	-	2.2e-06	27.9	0.7	0.0048	17.1	0.2	2.1	1	1	1	2	2	2	2	Ferritin-like	domain
FA_desaturase_2	PF03405.14	gi|289596135|ref|YP_003482831.1|	-	0.014	14.3	1.5	0.9	8.3	0.0	2.1	2	0	0	2	2	2	0	Fatty	acid	desaturase
COQ7	PF03232.13	gi|289596135|ref|YP_003482831.1|	-	0.017	14.9	2.2	0.53	10.0	0.3	2.1	2	0	0	2	2	2	0	Ubiquinone	biosynthesis	protein	COQ7
NTS	PF15447.6	gi|289596135|ref|YP_003482831.1|	-	0.032	14.7	0.4	5.6	7.5	0.0	2.4	2	0	0	2	2	2	0	N-terminal	segments	of	PfEMP1
DUF1847	PF08901.11	gi|289596135|ref|YP_003482831.1|	-	0.58	9.8	3.2	0.55	9.9	2.0	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1847)
Cas9_PI2	PF18070.1	gi|289596135|ref|YP_003482831.1|	-	1.2	9.9	6.0	1.3	9.8	3.7	2.1	2	1	0	2	2	2	0	CRISPR-Cas9	PI	domain
Trp_Tyr_perm	PF03222.13	gi|289596136|ref|YP_003482832.1|	-	8.2e-29	100.8	44.1	1.8e-28	99.7	44.1	1.4	1	1	0	1	1	1	1	Tryptophan/tyrosine	permease	family
Aa_trans	PF01490.18	gi|289596136|ref|YP_003482832.1|	-	7.3e-14	51.3	47.0	9.1e-13	47.7	47.0	2.2	1	1	0	1	1	1	1	Transmembrane	amino	acid	transporter	protein
Spore_permease	PF03845.13	gi|289596136|ref|YP_003482832.1|	-	4.5e-06	25.7	30.8	4.5e-06	25.7	30.8	2.0	1	1	0	2	2	2	1	Spore	germination	protein
AsnC_trans_reg	PF01037.21	gi|289596137|ref|YP_003482833.1|	-	1.8e-14	53.4	0.0	2.1e-14	53.3	0.0	1.1	1	0	0	1	1	1	1	Lrp/AsnC	ligand	binding	domain
NapD	PF03927.13	gi|289596137|ref|YP_003482833.1|	-	5.1e-05	23.2	0.1	6.5e-05	22.9	0.1	1.1	1	0	0	1	1	1	1	NapD	protein
AcMNPV_Ac109	PF05054.12	gi|289596137|ref|YP_003482833.1|	-	0.0097	15.0	0.1	0.011	14.8	0.1	1.0	1	0	0	1	1	1	1	Autographa	californica	nuclear	polyhedrosis	virus	(AcMNPV)	protein
DUF3839	PF12943.7	gi|289596137|ref|YP_003482833.1|	-	0.063	12.7	0.3	0.072	12.5	0.3	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3839)
PHP	PF02811.19	gi|289596138|ref|YP_003482834.1|	-	1.3e-13	51.6	0.0	1.9e-13	51.0	0.0	1.4	1	1	0	1	1	1	1	PHP	domain
MR_MLE_C	PF13378.6	gi|289596138|ref|YP_003482834.1|	-	0.0089	15.6	0.0	0.21	11.1	0.0	2.1	2	0	0	2	2	2	1	Enolase	C-terminal	domain-like
OST_P2	PF18235.1	gi|289596138|ref|YP_003482834.1|	-	0.021	14.8	0.5	0.046	13.7	0.5	1.6	1	0	0	1	1	1	0	Oligosaccharyltransferase	Peripheral	2	domain
adh_short_C2	PF13561.6	gi|289596139|ref|YP_003482835.1|	-	1.8e-55	188.1	0.0	2.8e-55	187.5	0.0	1.2	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.25	gi|289596139|ref|YP_003482835.1|	-	5.2e-49	166.4	0.1	7.4e-49	165.9	0.1	1.2	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.10	gi|289596139|ref|YP_003482835.1|	-	4.8e-09	36.4	0.0	8.6e-09	35.6	0.0	1.3	1	0	0	1	1	1	1	KR	domain
Polysacc_synt_2	PF02719.15	gi|289596139|ref|YP_003482835.1|	-	3.4e-05	23.1	0.1	5.3e-05	22.5	0.1	1.2	1	0	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_10	PF13460.6	gi|289596139|ref|YP_003482835.1|	-	5.6e-05	23.1	0.0	0.00031	20.7	0.0	2.0	1	1	0	1	1	1	1	NAD(P)H-binding
3HCDH_N	PF02737.18	gi|289596139|ref|YP_003482835.1|	-	5.9e-05	23.0	0.6	0.00012	22.0	0.3	1.6	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.17	gi|289596139|ref|YP_003482835.1|	-	0.0013	19.2	0.3	0.0095	16.5	0.2	2.1	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
DFP	PF04127.15	gi|289596139|ref|YP_003482835.1|	-	0.0016	18.3	0.1	0.0026	17.6	0.1	1.3	1	0	0	1	1	1	1	DNA	/	pantothenate	metabolism	flavoprotein
NAD_Gly3P_dh_N	PF01210.23	gi|289596139|ref|YP_003482835.1|	-	0.009	16.0	0.1	0.03	14.3	0.0	1.8	2	0	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
NAD_binding_2	PF03446.15	gi|289596139|ref|YP_003482835.1|	-	0.014	15.6	0.5	0.031	14.4	0.1	1.8	2	0	0	2	2	2	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
TrkA_N	PF02254.18	gi|289596139|ref|YP_003482835.1|	-	0.031	14.5	0.2	0.061	13.6	0.2	1.6	1	1	0	1	1	1	0	TrkA-N	domain
NAD_binding_7	PF13241.6	gi|289596139|ref|YP_003482835.1|	-	0.04	14.4	0.2	0.075	13.5	0.2	1.5	1	0	0	1	1	1	0	Putative	NAD(P)-binding
Epimerase	PF01370.21	gi|289596139|ref|YP_003482835.1|	-	0.096	12.1	0.0	0.13	11.7	0.0	1.3	1	0	0	1	1	1	0	NAD	dependent	epimerase/dehydratase	family
THF_DHG_CYH_C	PF02882.19	gi|289596139|ref|YP_003482835.1|	-	0.1	11.9	0.3	0.2	10.9	0.1	1.6	2	0	0	2	2	2	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
MFS_1	PF07690.16	gi|289596140|ref|YP_003482836.1|	-	3.8e-25	88.6	57.4	3.2e-17	62.5	35.7	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_1_like	PF12832.7	gi|289596140|ref|YP_003482836.1|	-	6.1e-12	45.1	31.2	5e-11	42.1	31.2	2.0	1	1	0	1	1	1	1	MFS_1	like	family
Sugar_tr	PF00083.24	gi|289596140|ref|YP_003482836.1|	-	3.9e-08	32.6	41.2	1.6e-06	27.3	7.9	3.8	2	2	1	3	3	3	3	Sugar	(and	other)	transporter
Aminotran_3	PF00202.21	gi|289596141|ref|YP_003482837.1|	-	6.7e-89	298.3	0.0	8.4e-89	298.0	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
DUF4709	PF15821.5	gi|289596141|ref|YP_003482837.1|	-	0.04	14.2	1.0	0.076	13.3	0.1	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4709)
tRNA-synt_2	PF00152.20	gi|289596142|ref|YP_003482838.1|	-	3.6e-91	305.5	0.5	4.4e-91	305.2	0.5	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.25	gi|289596142|ref|YP_003482838.1|	-	7.8e-15	54.6	0.5	1.6e-14	53.6	0.5	1.5	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.20	gi|289596142|ref|YP_003482838.1|	-	6.8e-06	25.7	0.7	0.0012	18.3	0.0	2.8	3	0	0	3	3	3	2	tRNA	synthetases	class	II	core	domain	(F)
ATPase	PF06745.13	gi|289596143|ref|YP_003482839.1|	-	2.2e-63	213.7	2.0	4.3e-31	108.1	0.0	3.0	3	0	0	3	3	3	3	KaiC
AAA_25	PF13481.6	gi|289596143|ref|YP_003482839.1|	-	1.5e-12	47.5	0.0	1.8e-05	24.4	0.0	2.5	2	1	0	2	2	2	2	AAA	domain
DnaB_C	PF03796.15	gi|289596143|ref|YP_003482839.1|	-	1.9e-11	43.8	0.0	0.00013	21.4	0.0	2.6	3	0	0	3	3	3	2	DnaB-like	helicase	C	terminal	domain
GvpD	PF07088.11	gi|289596143|ref|YP_003482839.1|	-	2.7e-09	36.2	0.0	6.1e-06	25.1	0.0	2.2	2	0	0	2	2	2	2	GvpD	gas	vesicle	protein
IstB_IS21	PF01695.17	gi|289596143|ref|YP_003482839.1|	-	2.9e-09	36.9	0.1	0.0023	17.7	0.0	3.2	3	0	0	3	3	3	2	IstB-like	ATP	binding	protein
AAA_14	PF13173.6	gi|289596143|ref|YP_003482839.1|	-	4.8e-07	29.9	0.1	0.0056	16.7	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
AAA_22	PF13401.6	gi|289596143|ref|YP_003482839.1|	-	8.9e-07	29.3	0.1	0.0058	16.9	0.0	2.8	2	2	0	2	2	2	2	AAA	domain
AAA	PF00004.29	gi|289596143|ref|YP_003482839.1|	-	2.6e-06	27.9	0.2	0.0015	19.0	0.2	2.7	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF2075	PF09848.9	gi|289596143|ref|YP_003482839.1|	-	3.9e-06	26.4	0.0	0.027	13.7	0.0	2.2	2	0	0	2	2	2	2	Uncharacterized	conserved	protein	(DUF2075)
NACHT	PF05729.12	gi|289596143|ref|YP_003482839.1|	-	1.1e-05	25.4	0.0	0.00071	19.5	0.0	2.3	2	0	0	2	2	2	1	NACHT	domain
AAA_24	PF13479.6	gi|289596143|ref|YP_003482839.1|	-	4.7e-05	23.2	0.4	0.37	10.5	0.2	2.7	2	1	0	2	2	2	2	AAA	domain
AAA_11	PF13086.6	gi|289596143|ref|YP_003482839.1|	-	6.6e-05	22.8	0.0	0.0085	15.9	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
ResIII	PF04851.15	gi|289596143|ref|YP_003482839.1|	-	9.9e-05	22.4	0.1	0.11	12.5	0.0	2.4	2	0	0	2	2	2	2	Type	III	restriction	enzyme,	res	subunit
AAA_30	PF13604.6	gi|289596143|ref|YP_003482839.1|	-	0.00012	21.8	0.0	0.026	14.3	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_10	PF12846.7	gi|289596143|ref|YP_003482839.1|	-	0.0002	20.4	0.4	0.28	10.1	0.1	2.1	2	0	0	2	2	2	2	AAA-like	domain
Sigma54_activat	PF00158.26	gi|289596143|ref|YP_003482839.1|	-	0.0002	21.1	0.0	0.12	12.1	0.0	2.3	2	0	0	2	2	2	1	Sigma-54	interaction	domain
PhoH	PF02562.16	gi|289596143|ref|YP_003482839.1|	-	0.00025	20.6	0.1	0.043	13.3	0.0	2.4	2	0	0	2	2	2	1	PhoH-like	protein
AAA_7	PF12775.7	gi|289596143|ref|YP_003482839.1|	-	0.00042	19.9	0.1	0.041	13.4	0.0	2.3	2	0	0	2	2	2	1	P-loop	containing	dynein	motor	region
Zot	PF05707.12	gi|289596143|ref|YP_003482839.1|	-	0.0005	19.8	0.0	0.39	10.3	0.0	2.4	2	0	0	2	2	2	2	Zonular	occludens	toxin	(Zot)
AAA_5	PF07728.14	gi|289596143|ref|YP_003482839.1|	-	0.00095	19.2	0.2	0.12	12.3	0.1	3.0	2	1	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
T2SSE	PF00437.20	gi|289596143|ref|YP_003482839.1|	-	0.0012	17.9	0.0	0.039	13.0	0.0	2.3	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
AAA_35	PF14516.6	gi|289596143|ref|YP_003482839.1|	-	0.0016	17.3	0.0	0.37	9.6	0.0	2.4	2	0	0	2	2	2	1	AAA-like	domain
AAA_16	PF13191.6	gi|289596143|ref|YP_003482839.1|	-	0.0016	18.8	0.0	0.02	15.3	0.0	2.1	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_19	PF13245.6	gi|289596143|ref|YP_003482839.1|	-	0.0018	18.6	0.0	0.012	15.9	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_29	PF13555.6	gi|289596143|ref|YP_003482839.1|	-	0.0024	17.6	0.1	1.5	8.6	0.0	2.6	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
RNA_helicase	PF00910.22	gi|289596143|ref|YP_003482839.1|	-	0.0025	18.2	0.0	0.12	12.8	0.0	2.5	2	0	0	2	2	2	1	RNA	helicase
Rad51	PF08423.11	gi|289596143|ref|YP_003482839.1|	-	0.004	16.4	0.0	0.055	12.7	0.0	2.1	2	0	0	2	2	2	1	Rad51
DEAD	PF00270.29	gi|289596143|ref|YP_003482839.1|	-	0.0075	16.0	0.1	3.8	7.2	0.0	3.2	3	1	1	4	4	3	1	DEAD/DEAH	box	helicase
AAA_18	PF13238.6	gi|289596143|ref|YP_003482839.1|	-	0.0088	16.6	0.4	0.82	10.2	0.1	2.7	2	1	0	2	2	2	1	AAA	domain
RecA	PF00154.21	gi|289596143|ref|YP_003482839.1|	-	0.013	15.0	0.0	0.9	9.0	0.0	2.5	2	0	0	2	2	2	0	recA	bacterial	DNA	recombination	protein
TrwB_AAD_bind	PF10412.9	gi|289596143|ref|YP_003482839.1|	-	0.015	14.3	0.0	0.67	8.8	0.0	2.2	2	0	0	2	2	2	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
ATPase_2	PF01637.18	gi|289596143|ref|YP_003482839.1|	-	0.018	15.0	0.6	0.6	10.0	0.2	2.5	2	1	0	2	2	2	0	ATPase	domain	predominantly	from	Archaea
PAXNEB	PF05625.11	gi|289596143|ref|YP_003482839.1|	-	0.023	13.9	0.1	0.057	12.5	0.0	1.6	2	0	0	2	2	2	0	PAXNEB	protein
Mg_chelatase	PF01078.21	gi|289596143|ref|YP_003482839.1|	-	0.024	14.1	0.0	0.59	9.5	0.0	2.2	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
RuvB_N	PF05496.12	gi|289596143|ref|YP_003482839.1|	-	0.048	13.4	0.3	0.68	9.7	0.0	2.9	2	1	1	3	3	3	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
ABC_tran	PF00005.27	gi|289596143|ref|YP_003482839.1|	-	0.049	14.2	0.0	0.83	10.2	0.0	2.3	2	0	0	2	2	2	0	ABC	transporter
TsaE	PF02367.17	gi|289596143|ref|YP_003482839.1|	-	0.049	13.6	2.0	3	7.9	0.1	3.0	3	0	0	3	3	3	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
CbiA	PF01656.23	gi|289596143|ref|YP_003482839.1|	-	0.054	13.6	0.0	0.44	10.6	0.0	2.6	1	1	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
cobW	PF02492.19	gi|289596143|ref|YP_003482839.1|	-	0.076	12.6	0.0	2	8.0	0.0	2.3	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
Sigma54_activ_2	PF14532.6	gi|289596143|ref|YP_003482839.1|	-	0.082	13.0	0.0	1.9	8.6	0.0	2.3	2	0	0	2	2	2	0	Sigma-54	interaction	domain
AAA_33	PF13671.6	gi|289596143|ref|YP_003482839.1|	-	0.093	12.9	0.1	8.1	6.6	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
ATP-synt_ab	PF00006.25	gi|289596143|ref|YP_003482839.1|	-	0.14	11.8	0.0	0.97	9.0	0.0	2.1	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
TipAS	PF07739.13	gi|289596144|ref|YP_003482840.1|	-	0.00025	21.6	0.4	0.36	11.4	0.0	2.2	2	0	0	2	2	2	2	TipAS	antibiotic-recognition	domain
YueH	PF14166.6	gi|289596144|ref|YP_003482840.1|	-	0.0035	17.2	0.7	0.27	11.1	0.1	2.4	1	1	1	2	2	2	1	YueH-like	protein
VapB_antitoxin	PF09957.9	gi|289596144|ref|YP_003482840.1|	-	0.013	15.4	0.1	0.071	13.0	0.0	2.2	2	1	0	2	2	2	0	Bacterial	antitoxin	of	type	II	TA	system,	VapB
SDH_sah	PF01972.16	gi|289596144|ref|YP_003482840.1|	-	0.015	14.3	0.6	0.11	11.4	0.3	2.0	1	1	1	2	2	2	0	Serine	dehydrogenase	proteinase
Imm68	PF15583.6	gi|289596144|ref|YP_003482840.1|	-	0.023	14.9	0.9	0.035	14.3	0.9	1.3	1	0	0	1	1	1	0	Immunity	protein	68
Uso1_p115_head	PF04869.14	gi|289596144|ref|YP_003482840.1|	-	0.12	11.5	0.2	0.24	10.5	0.2	1.6	1	1	0	1	1	1	0	Uso1	/	p115	like	vesicle	tethering	protein,	head	region
RHH_6	PF16762.5	gi|289596144|ref|YP_003482840.1|	-	0.24	12.0	3.2	4.7	7.9	0.0	2.2	1	1	1	2	2	2	0	Ribbon-helix-helix	domain
DUF1604	PF07713.13	gi|289596144|ref|YP_003482840.1|	-	0.45	10.4	3.1	1.5	8.7	3.0	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1604)
SUV3_C	PF12513.8	gi|289596144|ref|YP_003482840.1|	-	0.6	10.1	3.3	3.1	7.8	0.3	2.5	1	1	1	2	2	2	0	Mitochondrial	degradasome	RNA	helicase	subunit	C	terminal
SNO	PF01174.19	gi|289596145|ref|YP_003482841.1|	-	2.4e-53	180.8	0.0	2.7e-53	180.6	0.0	1.0	1	0	0	1	1	1	1	SNO	glutamine	amidotransferase	family
GATase_3	PF07685.14	gi|289596145|ref|YP_003482841.1|	-	4.3e-08	33.0	0.0	5.5e-08	32.6	0.0	1.1	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
Peptidase_S51	PF03575.17	gi|289596145|ref|YP_003482841.1|	-	5e-07	29.6	0.0	6.6e-07	29.2	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	S51
GATase	PF00117.28	gi|289596145|ref|YP_003482841.1|	-	0.0019	18.0	0.0	0.0037	17.0	0.0	1.4	1	1	0	1	1	1	1	Glutamine	amidotransferase	class-I
DJ-1_PfpI	PF01965.24	gi|289596145|ref|YP_003482841.1|	-	0.0069	16.2	0.0	0.0088	15.9	0.0	1.2	1	0	0	1	1	1	1	DJ-1/PfpI	family
GCV_T	PF01571.21	gi|289596146|ref|YP_003482842.1|	-	1.2e-89	300.1	0.0	1.4e-89	299.8	0.0	1.1	1	0	0	1	1	1	1	Aminomethyltransferase	folate-binding	domain
GCV_T_C	PF08669.11	gi|289596146|ref|YP_003482842.1|	-	2.4e-20	72.2	0.1	4.2e-20	71.5	0.1	1.3	1	0	0	1	1	1	1	Glycine	cleavage	T-protein	C-terminal	barrel	domain
SoxG	PF04268.12	gi|289596146|ref|YP_003482842.1|	-	1.4e-05	25.3	0.0	0.015	15.5	0.0	2.9	2	1	1	3	3	3	2	Sarcosine	oxidase,	gamma	subunit	family
Peptidase_M50	PF02163.22	gi|289596147|ref|YP_003482843.1|	-	1.6e-07	30.8	13.8	2e-05	24.0	2.7	3.2	2	1	1	3	3	3	3	Peptidase	family	M50
TPR_2	PF07719.17	gi|289596148|ref|YP_003482844.1|	-	1.1e-130	415.5	99.6	1.2e-09	37.5	0.8	28.6	28	1	1	29	29	29	22	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|289596148|ref|YP_003482844.1|	-	1.9e-118	381.9	121.7	7e-12	44.6	0.2	28.0	29	0	0	29	29	28	21	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|289596148|ref|YP_003482844.1|	-	5.2e-101	322.6	137.1	1e-07	31.6	0.2	28.6	27	2	2	29	29	28	19	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|289596148|ref|YP_003482844.1|	-	2e-86	284.5	49.1	1.3e-08	35.2	0.0	17.4	12	4	8	20	20	19	17	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|289596148|ref|YP_003482844.1|	-	1.4e-78	252.8	26.9	1.5e-05	25.4	0.1	25.5	7	6	19	26	26	26	16	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|289596148|ref|YP_003482844.1|	-	4.2e-75	248.1	25.1	9.8e-08	32.5	0.0	15.8	11	3	6	18	18	17	13	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|289596148|ref|YP_003482844.1|	-	1e-72	240.4	51.6	4.7e-09	36.4	0.0	19.5	13	4	6	19	19	19	14	Tetratricopeptide	repeat
TPR_9	PF13371.6	gi|289596148|ref|YP_003482844.1|	-	2.7e-63	210.0	1.3	4e-07	30.1	0.0	14.4	10	3	5	15	15	15	11	Tetratricopeptide	repeat
TPR_11	PF13414.6	gi|289596148|ref|YP_003482844.1|	-	1.1e-61	204.3	107.9	4.8e-07	29.3	0.3	23.8	9	7	18	27	27	26	16	TPR	repeat
TPR_17	PF13431.6	gi|289596148|ref|YP_003482844.1|	-	6.1e-61	198.5	68.0	7.8e-07	29.1	0.0	25.9	24	1	4	28	28	26	12	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|289596148|ref|YP_003482844.1|	-	3.9e-60	200.0	73.0	2.8e-07	30.6	0.3	15.0	9	3	7	16	16	16	16	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_7	PF13176.6	gi|289596148|ref|YP_003482844.1|	-	3.2e-44	145.7	42.5	3.4e-05	23.6	0.0	22.7	22	3	3	25	25	23	9	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|289596148|ref|YP_003482844.1|	-	2.1e-38	128.4	60.0	0.011	16.4	0.0	21.9	23	0	0	23	23	22	10	Tetratricopeptide	repeat
TPR_10	PF13374.6	gi|289596148|ref|YP_003482844.1|	-	6.1e-29	99.1	53.4	0.0011	18.8	0.0	21.2	23	1	1	24	24	21	6	Tetratricopeptide	repeat
TPR_15	PF13429.6	gi|289596148|ref|YP_003482844.1|	-	3.3e-21	75.7	48.9	4.4e-06	26.1	2.0	9.6	3	2	5	8	8	8	6	Tetratricopeptide	repeat
NARP1	PF12569.8	gi|289596148|ref|YP_003482844.1|	-	2.4e-17	63.0	59.9	0.00036	19.6	2.6	11.3	4	2	6	12	12	12	9	NMDA	receptor-regulated	protein	1
TPR_20	PF14561.6	gi|289596148|ref|YP_003482844.1|	-	3.1e-17	62.7	32.9	0.013	15.8	0.0	14.6	10	4	6	16	16	16	4	Tetratricopeptide	repeat
Fis1_TPR_C	PF14853.6	gi|289596148|ref|YP_003482844.1|	-	6.2e-13	48.6	82.3	0.39	10.8	0.1	20.4	15	7	6	21	21	21	6	Fis1	C-terminal	tetratricopeptide	repeat
BTAD	PF03704.17	gi|289596148|ref|YP_003482844.1|	-	4.5e-12	46.6	9.0	2.9	8.3	0.0	9.9	7	4	3	12	12	11	3	Bacterial	transcriptional	activator	domain
TPR_MalT	PF17874.1	gi|289596148|ref|YP_003482844.1|	-	9.5e-12	44.9	1.8	0.18	11.1	0.1	9.7	6	4	4	10	10	10	3	MalT-like	TPR	region
ChAPs	PF09295.10	gi|289596148|ref|YP_003482844.1|	-	5.7e-11	42.0	26.9	0.0013	17.8	0.7	8.3	4	1	5	9	9	9	3	ChAPs	(Chs5p-Arf1p-binding	proteins)
DUF3856	PF12968.7	gi|289596148|ref|YP_003482844.1|	-	9.3e-09	35.5	25.8	1.2	9.3	0.0	12.5	8	4	4	14	14	12	2	Domain	of	Unknown	Function	(DUF3856)
TPR_4	PF07721.14	gi|289596148|ref|YP_003482844.1|	-	3e-06	27.3	0.0	1.2e+02	3.8	0.0	9.0	10	0	0	10	10	7	0	Tetratricopeptide	repeat
Wzy_C_2	PF11846.8	gi|289596148|ref|YP_003482844.1|	-	0.00012	22.1	11.0	0.12	12.2	0.2	7.2	6	4	1	7	7	7	1	Virulence	factor	membrane-bound	polymerase,	C-terminal
PPR	PF01535.20	gi|289596148|ref|YP_003482844.1|	-	0.00021	21.3	33.1	1.9	8.9	0.1	13.7	17	0	0	17	17	11	1	PPR	repeat
HrpB1_HrpK	PF09613.10	gi|289596148|ref|YP_003482844.1|	-	0.00021	20.9	0.7	12	5.6	0.0	5.8	4	1	1	5	5	5	0	Bacterial	type	III	secretion	protein	(HrpB1_HrpK)
ANAPC5	PF12862.7	gi|289596148|ref|YP_003482844.1|	-	0.00053	20.0	11.2	0.71	10.0	0.0	8.4	9	2	1	10	10	9	1	Anaphase-promoting	complex	subunit	5
DUF4810	PF16068.5	gi|289596148|ref|YP_003482844.1|	-	0.0011	19.5	1.8	25	5.5	0.0	6.8	7	2	1	8	8	5	0	Domain	of	unknown	function	(DUF4810)
TPR_5	PF12688.7	gi|289596148|ref|YP_003482844.1|	-	0.0024	18.1	7.7	7.7	6.8	0.0	6.8	6	2	1	8	8	7	0	Tetratrico	peptide	repeat
PPTA	PF01239.22	gi|289596148|ref|YP_003482844.1|	-	0.0044	16.7	4.3	0.12	12.2	0.1	5.3	5	0	0	5	5	3	1	Protein	prenyltransferase	alpha	subunit	repeat
HTH_Bact	PF18768.1	gi|289596148|ref|YP_003482844.1|	-	0.013	15.1	21.5	0.16	11.6	0.8	8.4	9	0	0	9	9	8	0	Helix-turn-helix	bacterial	domain
Utp13	PF08625.11	gi|289596148|ref|YP_003482844.1|	-	0.013	15.4	4.0	0.54	10.2	0.1	4.5	3	0	0	3	3	3	0	Utp13	specific	WD40	associated	domain
MIT	PF04212.18	gi|289596148|ref|YP_003482844.1|	-	0.026	14.6	72.6	0.18	11.9	0.3	17.5	19	3	3	22	22	20	0	MIT	(microtubule	interacting	and	transport)	domain
DUF1965	PF09248.10	gi|289596148|ref|YP_003482844.1|	-	0.065	13.0	2.4	1.1	9.1	0.0	3.6	3	1	0	3	3	3	0	Domain	of	unknown	function	(DUF1965)
SPOB_a	PF14689.6	gi|289596148|ref|YP_003482844.1|	-	0.065	12.9	4.6	12	5.7	0.1	6.6	6	0	0	6	6	6	0	Sensor_kinase_SpoOB-type,	alpha-helical	domain
PknG_TPR	PF16918.5	gi|289596148|ref|YP_003482844.1|	-	0.16	10.7	0.5	4.3	6.0	0.0	3.3	2	2	0	2	2	2	0	Protein	kinase	G	tetratricopeptide	repeat
Alkyl_sulf_dimr	PF14863.6	gi|289596148|ref|YP_003482844.1|	-	0.19	12.2	18.0	41	4.6	0.0	9.0	7	3	2	10	10	8	0	Alkyl	sulfatase	dimerisation
SHNi-TPR	PF10516.9	gi|289596148|ref|YP_003482844.1|	-	0.52	9.8	12.1	48	3.5	0.1	7.2	7	0	0	7	7	5	0	SHNi-TPR
Gar1	PF04410.14	gi|289596149|ref|YP_003482845.1|	-	2.8e-05	23.9	0.4	3.2e-05	23.8	0.4	1.1	1	0	0	1	1	1	1	Gar1/Naf1	RNA	binding	region
TFIIB	PF00382.19	gi|289596150|ref|YP_003482846.1|	-	2.9e-43	145.8	6.7	2.3e-21	75.6	0.5	2.9	3	0	0	3	3	3	2	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.12	gi|289596150|ref|YP_003482846.1|	-	1.1e-20	72.9	0.9	1.8e-20	72.2	0.9	1.4	1	0	0	1	1	1	1	TFIIB	zinc-binding
Sigma70_r4	PF04545.16	gi|289596150|ref|YP_003482846.1|	-	3e-05	23.5	1.7	0.00052	19.5	0.0	3.1	2	2	0	2	2	2	1	Sigma-70,	region	4
RB_B	PF01857.20	gi|289596150|ref|YP_003482846.1|	-	4.3e-05	23.6	0.0	0.016	15.2	0.0	2.3	2	0	0	2	2	2	1	Retinoblastoma-associated	protein	B	domain
Cyclin_C	PF02984.19	gi|289596150|ref|YP_003482846.1|	-	0.00014	22.0	0.0	0.66	10.1	0.0	2.4	1	1	1	2	2	2	2	Cyclin,	C-terminal	domain
Cyclin_N	PF00134.23	gi|289596150|ref|YP_003482846.1|	-	0.001	18.8	0.1	0.081	12.7	0.1	2.3	2	0	0	2	2	2	1	Cyclin,	N-terminal	domain
HTH_AsnC-type	PF13404.6	gi|289596150|ref|YP_003482846.1|	-	0.0056	16.5	0.2	0.019	14.8	0.2	2.1	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
zf-ACC	PF17848.1	gi|289596150|ref|YP_003482846.1|	-	0.013	15.5	2.4	0.15	12.2	0.9	2.5	2	0	0	2	2	2	0	Acetyl-coA	carboxylase	zinc	finger	domain
A2L_zn_ribbon	PF08792.10	gi|289596150|ref|YP_003482846.1|	-	0.014	15.1	0.6	2.2	8.1	0.1	2.4	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
Zn_Tnp_IS1595	PF12760.7	gi|289596150|ref|YP_003482846.1|	-	0.02	14.9	0.3	0.049	13.6	0.3	1.7	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
Auto_anti-p27	PF06677.12	gi|289596150|ref|YP_003482846.1|	-	0.034	14.3	2.0	0.074	13.2	2.0	1.5	1	0	0	1	1	1	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
Lar_restr_allev	PF14354.6	gi|289596150|ref|YP_003482846.1|	-	0.043	14.2	0.1	0.11	12.9	0.1	1.7	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
OrfB_Zn_ribbon	PF07282.11	gi|289596150|ref|YP_003482846.1|	-	0.047	13.6	0.4	0.099	12.6	0.4	1.5	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
Sigma70_r4_2	PF08281.12	gi|289596150|ref|YP_003482846.1|	-	0.049	13.3	0.3	0.49	10.1	0.2	2.7	2	1	1	3	3	3	0	Sigma-70,	region	4
HTH_3	PF01381.22	gi|289596150|ref|YP_003482846.1|	-	0.063	13.4	1.1	1.3	9.1	0.0	3.5	3	1	1	4	4	4	0	Helix-turn-helix
Zn-ribbon_8	PF09723.10	gi|289596150|ref|YP_003482846.1|	-	0.073	13.2	1.5	0.26	11.4	0.2	2.2	1	1	1	2	2	2	0	Zinc	ribbon	domain
zf-ribbon_3	PF13248.6	gi|289596150|ref|YP_003482846.1|	-	0.086	12.3	1.6	0.35	10.3	1.6	2.0	1	1	0	1	1	1	0	zinc-ribbon	domain
UPF0253	PF06786.12	gi|289596150|ref|YP_003482846.1|	-	0.097	13.0	0.0	0.3	11.4	0.0	1.8	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0253)
HTH_Tnp_ISL3	PF13542.6	gi|289596150|ref|YP_003482846.1|	-	0.11	12.0	0.1	0.35	10.3	0.1	1.9	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	transposase	family	ISL3
zf-RING_7	PF02591.15	gi|289596150|ref|YP_003482846.1|	-	0.16	12.2	1.2	0.3	11.3	0.1	2.1	2	0	0	2	2	1	0	C4-type	zinc	ribbon	domain
zinc_ribbon_5	PF13719.6	gi|289596150|ref|YP_003482846.1|	-	0.18	11.6	0.3	0.43	10.4	0.3	1.6	1	0	0	1	1	1	0	zinc-ribbon	domain
HTH_23	PF13384.6	gi|289596150|ref|YP_003482846.1|	-	8.9	6.2	13.7	0.9	9.4	0.2	4.5	3	2	1	4	4	4	0	Homeodomain-like	domain
CheR	PF01739.18	gi|289596151|ref|YP_003482847.1|	-	0.078	12.4	0.0	0.15	11.6	0.0	1.5	1	1	0	1	1	1	0	CheR	methyltransferase,	SAM	binding	domain
B3	PF02362.21	gi|289596152|ref|YP_003482848.1|	-	0.07	13.0	0.1	0.079	12.8	0.1	1.3	1	1	0	1	1	1	0	B3	DNA	binding	domain
Radical_SAM	PF04055.21	gi|289596153|ref|YP_003482849.1|	-	5.1e-26	92.0	0.0	9.8e-26	91.1	0.0	1.5	1	0	0	1	1	1	1	Radical	SAM	superfamily
Wyosine_form	PF08608.12	gi|289596153|ref|YP_003482849.1|	-	1.7e-21	76.3	0.1	3.5e-21	75.3	0.1	1.6	1	0	0	1	1	1	1	Wyosine	base	formation
Fer4_14	PF13394.6	gi|289596153|ref|YP_003482849.1|	-	0.0071	16.5	1.8	0.2	11.8	1.0	2.6	2	1	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.6	gi|289596153|ref|YP_003482849.1|	-	0.024	14.9	1.0	0.076	13.3	0.3	2.1	2	1	0	2	2	2	0	4Fe-4S	single	cluster	domain
HAD	PF12710.7	gi|289596153|ref|YP_003482849.1|	-	0.19	12.1	0.0	0.61	10.5	0.0	1.8	2	0	0	2	2	2	0	haloacid	dehalogenase-like	hydrolase
FtsX	PF02687.21	gi|289596154|ref|YP_003482850.1|	-	1.6e-19	70.1	21.5	5.6e-11	42.8	3.6	5.8	6	1	1	7	7	7	2	FtsX-like	permease	family
MacB_PCD	PF12704.7	gi|289596154|ref|YP_003482850.1|	-	1.3e-07	32.1	0.2	1.3e-07	32.1	0.2	3.2	3	0	0	3	3	3	1	MacB-like	periplasmic	core	domain
Saf_2TM	PF18303.1	gi|289596154|ref|YP_003482850.1|	-	3.6	7.1	9.6	10	5.7	3.7	3.3	3	0	0	3	3	3	0	SAVED-fused	2TM	effector	domain
ABC_tran	PF00005.27	gi|289596155|ref|YP_003482851.1|	-	1.9e-31	109.4	0.0	2.6e-31	108.9	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|289596155|ref|YP_003482851.1|	-	1.3e-08	35.0	0.2	0.0014	18.5	0.0	2.1	1	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|289596155|ref|YP_003482851.1|	-	6.2e-08	32.3	0.0	0.0001	21.8	0.0	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.6	gi|289596155|ref|YP_003482851.1|	-	0.00078	19.3	0.1	0.022	14.4	0.0	2.1	1	1	0	2	2	2	1	AAA	ATPase	domain
AAA_29	PF13555.6	gi|289596155|ref|YP_003482851.1|	-	0.0008	19.1	0.0	0.0021	17.7	0.0	1.7	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.6	gi|289596155|ref|YP_003482851.1|	-	0.0015	18.9	0.0	0.002	18.5	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_18	PF13238.6	gi|289596155|ref|YP_003482851.1|	-	0.0029	18.1	0.0	0.21	12.1	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_22	PF13401.6	gi|289596155|ref|YP_003482851.1|	-	0.0055	17.0	0.0	0.028	14.7	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_33	PF13671.6	gi|289596155|ref|YP_003482851.1|	-	0.0068	16.6	0.1	0.012	15.7	0.1	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_23	PF13476.6	gi|289596155|ref|YP_003482851.1|	-	0.018	15.6	0.3	0.047	14.2	0.0	1.8	2	1	0	2	2	2	0	AAA	domain
YlmH_RBD	PF17774.1	gi|289596155|ref|YP_003482851.1|	-	0.021	15.1	0.0	0.051	13.9	0.0	1.6	1	0	0	1	1	1	0	Putative	RNA-binding	domain	in	YlmH
RsgA_GTPase	PF03193.16	gi|289596155|ref|YP_003482851.1|	-	0.021	14.8	0.0	0.034	14.0	0.0	1.3	1	0	0	1	1	1	0	RsgA	GTPase
T2SSE	PF00437.20	gi|289596155|ref|YP_003482851.1|	-	0.026	13.6	0.2	0.049	12.7	0.0	1.5	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
AAA_7	PF12775.7	gi|289596155|ref|YP_003482851.1|	-	0.035	13.6	0.0	0.093	12.2	0.0	1.8	2	0	0	2	2	2	0	P-loop	containing	dynein	motor	region
SRP54	PF00448.22	gi|289596155|ref|YP_003482851.1|	-	0.04	13.5	0.2	0.26	10.9	0.1	2.3	3	0	0	3	3	3	0	SRP54-type	protein,	GTPase	domain
AAA_24	PF13479.6	gi|289596155|ref|YP_003482851.1|	-	0.041	13.6	0.2	0.12	12.1	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
AAA_30	PF13604.6	gi|289596155|ref|YP_003482851.1|	-	0.048	13.4	0.0	0.11	12.3	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Pox_A32	PF04665.12	gi|289596155|ref|YP_003482851.1|	-	0.058	12.9	0.5	0.12	11.8	0.1	1.6	2	0	0	2	2	2	0	Poxvirus	A32	protein
AAA_25	PF13481.6	gi|289596155|ref|YP_003482851.1|	-	0.085	12.4	0.1	0.15	11.6	0.1	1.4	1	0	0	1	1	1	0	AAA	domain
FtsK_SpoIIIE	PF01580.18	gi|289596155|ref|YP_003482851.1|	-	0.092	12.1	0.0	0.26	10.6	0.0	1.6	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
Rad17	PF03215.15	gi|289596155|ref|YP_003482851.1|	-	0.096	12.6	0.0	0.14	12.1	0.0	1.3	1	0	0	1	1	1	0	Rad17	P-loop	domain
NACHT	PF05729.12	gi|289596155|ref|YP_003482851.1|	-	0.11	12.5	0.2	0.18	11.7	0.2	1.3	1	0	0	1	1	1	0	NACHT	domain
RNA_helicase	PF00910.22	gi|289596155|ref|YP_003482851.1|	-	0.13	12.7	0.0	0.25	11.7	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
SRPRB	PF09439.10	gi|289596155|ref|YP_003482851.1|	-	0.14	11.6	0.0	0.27	10.7	0.0	1.5	1	0	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
IstB_IS21	PF01695.17	gi|289596155|ref|YP_003482851.1|	-	0.15	11.8	0.0	0.44	10.2	0.0	1.8	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
G-alpha	PF00503.20	gi|289596155|ref|YP_003482851.1|	-	0.15	11.2	0.0	0.15	11.2	0.0	1.1	1	0	0	1	1	1	0	G-protein	alpha	subunit
DUF123	PF01986.16	gi|289596156|ref|YP_003482852.1|	-	5.3e-22	78.1	0.0	6.6e-22	77.8	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF123
GIY-YIG	PF01541.24	gi|289596156|ref|YP_003482852.1|	-	0.00048	20.4	0.6	0.00092	19.4	0.6	1.6	1	1	0	1	1	1	1	GIY-YIG	catalytic	domain
PfkB	PF00294.24	gi|289596157|ref|YP_003482853.1|	-	1.7e-29	103.1	0.0	5.2e-29	101.5	0.0	1.7	1	1	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Phos_pyr_kin	PF08543.12	gi|289596157|ref|YP_003482853.1|	-	0.03	13.7	0.0	0.042	13.2	0.0	1.1	1	0	0	1	1	1	0	Phosphomethylpyrimidine	kinase
Ribul_P_3_epim	PF00834.19	gi|289596158|ref|YP_003482854.1|	-	5.5e-77	257.6	0.6	6.3e-77	257.4	0.6	1.0	1	0	0	1	1	1	1	Ribulose-phosphate	3	epimerase	family
QRPTase_C	PF01729.19	gi|289596158|ref|YP_003482854.1|	-	0.015	15.1	0.1	0.027	14.2	0.1	1.4	1	1	0	1	1	1	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
TMP-TENI	PF02581.17	gi|289596158|ref|YP_003482854.1|	-	0.022	14.1	0.1	0.035	13.4	0.1	1.4	1	0	0	1	1	1	0	Thiamine	monophosphate	synthase
AP_endonuc_2	PF01261.24	gi|289596158|ref|YP_003482854.1|	-	0.084	12.3	0.0	6.6	6.1	0.0	2.7	1	1	1	2	2	2	0	Xylose	isomerase-like	TIM	barrel
DEAD	PF00270.29	gi|289596158|ref|YP_003482854.1|	-	0.12	12.1	0.0	0.22	11.2	0.0	1.3	1	0	0	1	1	1	0	DEAD/DEAH	box	helicase
Formyl_trans_N	PF00551.19	gi|289596159|ref|YP_003482855.1|	-	8.8e-57	191.8	0.0	1.1e-56	191.4	0.0	1.1	1	0	0	1	1	1	1	Formyl	transferase
DUF2824	PF11039.8	gi|289596159|ref|YP_003482855.1|	-	0.0018	18.3	0.0	0.0034	17.3	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2824)
ADH_zinc_N_2	PF13602.6	gi|289596159|ref|YP_003482855.1|	-	0.037	15.1	0.0	0.38	11.8	0.0	2.2	2	0	0	2	2	2	0	Zinc-binding	dehydrogenase
Orthopox_A36R	PF05950.11	gi|289596160|ref|YP_003482856.1|	-	0.85	9.8	3.0	5.7	7.1	0.1	2.0	1	1	1	2	2	2	0	Orthopoxvirus	A36R	protein
Diphthamide_syn	PF01866.17	gi|289596161|ref|YP_003482857.1|	-	4.6e-69	233.2	0.0	5.8e-69	232.8	0.0	1.0	1	0	0	1	1	1	1	Putative	diphthamide	synthesis	protein
SpoVS	PF04232.12	gi|289596161|ref|YP_003482857.1|	-	0.079	12.7	0.0	0.17	11.6	0.0	1.5	1	0	0	1	1	1	0	Stage	V	sporulation	protein	S	(SpoVS)
DUF1824	PF08854.10	gi|289596161|ref|YP_003482857.1|	-	0.08	12.9	0.0	0.97	9.4	0.0	2.5	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF1824)
Pox_A21	PF05323.12	gi|289596162|ref|YP_003482858.1|	-	0.15	12.6	0.6	0.24	12.0	0.6	1.4	1	0	0	1	1	1	0	Poxvirus	A21	Protein
Vpu	PF00558.19	gi|289596162|ref|YP_003482858.1|	-	1.3	8.8	5.6	1.8	8.4	2.0	2.0	2	0	0	2	2	2	0	Vpu	protein
GMP_synt_C	PF00958.22	gi|289596163|ref|YP_003482859.1|	-	4.5e-36	122.8	0.0	9.1e-36	121.8	0.0	1.5	1	0	0	1	1	1	1	GMP	synthase	C	terminal	domain
NAD_synthase	PF02540.17	gi|289596163|ref|YP_003482859.1|	-	9.9e-09	34.7	0.1	5.6e-07	28.9	0.0	2.2	2	0	0	2	2	2	1	NAD	synthase
QueC	PF06508.13	gi|289596163|ref|YP_003482859.1|	-	1.5e-05	24.6	0.0	0.0005	19.6	0.0	2.1	1	1	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
tRNA_Me_trans	PF03054.16	gi|289596163|ref|YP_003482859.1|	-	1.7e-05	23.8	0.1	0.016	14.0	0.0	2.2	2	0	0	2	2	2	2	tRNA	methyl	transferase
PAPS_reduct	PF01507.19	gi|289596163|ref|YP_003482859.1|	-	0.00011	22.3	0.0	0.00016	21.8	0.0	1.3	1	0	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
ATP_bind_3	PF01171.20	gi|289596163|ref|YP_003482859.1|	-	0.00015	21.6	0.0	0.00023	20.9	0.0	1.3	1	0	0	1	1	1	1	PP-loop	family
Arginosuc_synth	PF00764.19	gi|289596163|ref|YP_003482859.1|	-	0.00033	20.1	0.1	0.00056	19.3	0.1	1.3	1	0	0	1	1	1	1	Arginosuccinate	synthase
ThiI	PF02568.14	gi|289596163|ref|YP_003482859.1|	-	0.004	16.7	0.0	0.012	15.2	0.0	1.8	1	1	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
AIRC	PF00731.20	gi|289596164|ref|YP_003482860.1|	-	1.8e-45	154.2	0.0	2e-45	154.0	0.0	1.0	1	0	0	1	1	1	1	AIR	carboxylase
PrpR_N	PF06506.11	gi|289596164|ref|YP_003482860.1|	-	0.011	15.3	0.1	0.015	14.9	0.1	1.2	1	0	0	1	1	1	0	Propionate	catabolism	activator
DUF5362	PF17319.2	gi|289596164|ref|YP_003482860.1|	-	0.12	12.2	0.9	0.41	10.5	0.5	1.9	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5362)
cwf21	PF08312.12	gi|289596164|ref|YP_003482860.1|	-	0.13	12.4	3.4	0.2	11.8	3.4	1.2	1	0	0	1	1	1	0	cwf21	domain
PepSY_TM_like_2	PF16357.5	gi|289596165|ref|YP_003482861.1|	-	0.22	11.5	8.5	0.33	10.9	8.5	1.2	1	0	0	1	1	1	0	Putative	PepSY_TM-like
DUF1129	PF06570.11	gi|289596165|ref|YP_003482861.1|	-	0.57	9.6	9.7	0.67	9.4	9.7	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1129)
DUF3422	PF11902.8	gi|289596165|ref|YP_003482861.1|	-	0.89	8.6	3.0	1.2	8.2	3.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3422)
DUF2070	PF09843.9	gi|289596165|ref|YP_003482861.1|	-	1.8	6.8	8.9	1.9	6.7	8.9	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
VIT1	PF01988.19	gi|289596165|ref|YP_003482861.1|	-	9.4	6.0	9.9	1.8	8.3	5.9	1.7	1	1	1	2	2	2	0	VIT	family
AsnC_trans_reg	PF01037.21	gi|289596166|ref|YP_003482862.1|	-	3e-15	56.0	0.0	3.3e-15	55.8	0.0	1.0	1	0	0	1	1	1	1	Lrp/AsnC	ligand	binding	domain
NapD	PF03927.13	gi|289596166|ref|YP_003482862.1|	-	0.003	17.6	0.0	0.0035	17.4	0.0	1.1	1	0	0	1	1	1	1	NapD	protein
XPG_I	PF00867.18	gi|289596167|ref|YP_003482863.1|	-	2.1e-27	95.3	0.0	4.2e-27	94.3	0.0	1.5	1	0	0	1	1	1	1	XPG	I-region
XPG_N	PF00752.17	gi|289596167|ref|YP_003482863.1|	-	3.3e-18	66.0	0.0	7.5e-18	64.9	0.0	1.6	1	0	0	1	1	1	1	XPG	N-terminal	domain
5_3_exonuc	PF01367.20	gi|289596167|ref|YP_003482863.1|	-	1.4e-08	35.2	0.8	3.1e-08	34.1	0.0	1.9	2	0	0	2	2	2	1	5'-3'	exonuclease,	C-terminal	SAM	fold
HHH_5	PF14520.6	gi|289596167|ref|YP_003482863.1|	-	0.00011	22.7	0.0	0.00025	21.6	0.0	1.6	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
HHH_2	PF12826.7	gi|289596167|ref|YP_003482863.1|	-	0.0003	20.8	0.0	0.00078	19.5	0.0	1.7	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
DNA_pol_lambd_f	PF10391.9	gi|289596167|ref|YP_003482863.1|	-	0.16	11.8	0.0	0.36	10.7	0.0	1.6	1	0	0	1	1	1	0	Fingers	domain	of	DNA	polymerase	lambda
Rad51	PF08423.11	gi|289596168|ref|YP_003482864.1|	-	5.6e-36	124.1	0.2	7e-36	123.8	0.2	1.1	1	0	0	1	1	1	1	Rad51
RecA	PF00154.21	gi|289596168|ref|YP_003482864.1|	-	2e-12	47.2	0.1	2.4e-12	46.9	0.1	1.1	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
ATPase	PF06745.13	gi|289596168|ref|YP_003482864.1|	-	4.3e-10	39.3	3.0	2.3e-09	36.9	3.0	2.0	1	1	0	1	1	1	1	KaiC
AAA_25	PF13481.6	gi|289596168|ref|YP_003482864.1|	-	3.9e-08	33.1	0.0	5.5e-08	32.6	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
Zot	PF05707.12	gi|289596168|ref|YP_003482864.1|	-	1.1e-07	31.7	0.1	1.5e-07	31.3	0.1	1.1	1	0	0	1	1	1	1	Zonular	occludens	toxin	(Zot)
AAA_24	PF13479.6	gi|289596168|ref|YP_003482864.1|	-	7.5e-05	22.5	0.0	0.00012	21.9	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
ATPase_2	PF01637.18	gi|289596168|ref|YP_003482864.1|	-	0.00015	21.7	0.5	0.00027	21.0	0.5	1.4	1	0	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
CbiA	PF01656.23	gi|289596168|ref|YP_003482864.1|	-	0.0017	18.4	0.0	0.0026	17.8	0.0	1.3	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
DnaB_C	PF03796.15	gi|289596168|ref|YP_003482864.1|	-	0.0018	17.7	1.0	0.048	13.0	0.0	2.1	1	1	1	2	2	2	1	DnaB-like	helicase	C	terminal	domain
AAA	PF00004.29	gi|289596168|ref|YP_003482864.1|	-	0.003	18.0	0.1	0.0049	17.3	0.1	1.2	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
TrwB_AAD_bind	PF10412.9	gi|289596168|ref|YP_003482864.1|	-	0.0053	15.7	0.0	0.0083	15.1	0.0	1.4	1	0	0	1	1	1	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
PhoH	PF02562.16	gi|289596168|ref|YP_003482864.1|	-	0.014	14.8	0.2	0.029	13.8	0.1	1.7	1	1	1	2	2	2	0	PhoH-like	protein
AAA_16	PF13191.6	gi|289596168|ref|YP_003482864.1|	-	0.023	15.1	0.0	0.05	14.0	0.0	1.7	1	1	0	1	1	1	0	AAA	ATPase	domain
NACHT	PF05729.12	gi|289596168|ref|YP_003482864.1|	-	0.03	14.2	0.1	0.12	12.3	0.1	1.8	1	1	0	1	1	1	0	NACHT	domain
ATP-synt_ab	PF00006.25	gi|289596168|ref|YP_003482864.1|	-	0.035	13.7	0.3	0.12	12.0	0.2	2.0	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
IstB_IS21	PF01695.17	gi|289596168|ref|YP_003482864.1|	-	0.072	12.8	0.4	0.27	10.9	0.0	2.0	1	1	1	2	2	2	0	IstB-like	ATP	binding	protein
ArsA_ATPase	PF02374.15	gi|289596168|ref|YP_003482864.1|	-	0.13	11.4	0.4	0.82	8.8	0.0	2.1	2	1	0	2	2	2	0	Anion-transporting	ATPase
7tm_1	PF00001.21	gi|289596169|ref|YP_003482865.1|	-	0.068	12.5	3.9	0.045	13.1	2.6	1.3	1	1	0	1	1	1	0	7	transmembrane	receptor	(rhodopsin	family)
Trm56	PF01994.16	gi|289596170|ref|YP_003482866.1|	-	1.6e-48	163.5	0.0	2.3e-48	163.0	0.0	1.2	1	0	0	1	1	1	1	tRNA	ribose	2'-O-methyltransferase,	aTrm56
UbiA	PF01040.18	gi|289596171|ref|YP_003482867.1|	-	0.037	13.3	8.3	0.052	12.8	8.3	1.2	1	0	0	1	1	1	0	UbiA	prenyltransferase	family
DUF3784	PF12650.7	gi|289596171|ref|YP_003482867.1|	-	0.049	13.8	3.3	0.049	13.8	3.3	2.6	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF3784)
YfhO	PF09586.10	gi|289596171|ref|YP_003482867.1|	-	0.38	8.9	5.9	0.51	8.5	5.9	1.1	1	0	0	1	1	1	0	Bacterial	membrane	protein	YfhO
LapA_dom	PF06305.11	gi|289596171|ref|YP_003482867.1|	-	0.41	10.5	0.0	0.41	10.5	0.0	3.3	3	1	1	4	4	4	0	Lipopolysaccharide	assembly	protein	A	domain
PHO4	PF01384.20	gi|289596171|ref|YP_003482867.1|	-	0.45	9.5	2.4	0.54	9.2	2.4	1.1	1	0	0	1	1	1	0	Phosphate	transporter	family
Ac76	PF05814.11	gi|289596171|ref|YP_003482867.1|	-	0.77	9.8	5.7	0.63	10.1	3.9	1.7	2	0	0	2	2	2	0	Orf76	(Ac76)
Presenilin	PF01080.17	gi|289596171|ref|YP_003482867.1|	-	1.3	7.8	3.9	1.6	7.4	3.9	1.1	1	0	0	1	1	1	0	Presenilin
AgrB	PF04647.15	gi|289596171|ref|YP_003482867.1|	-	1.7	7.9	11.9	3.1	7.1	0.1	2.2	1	1	1	2	2	2	0	Accessory	gene	regulator	B
DUF2070	PF09843.9	gi|289596171|ref|YP_003482867.1|	-	8.2	4.6	6.7	11	4.2	6.7	1.2	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
ArsR	PF09824.9	gi|289596172|ref|YP_003482868.1|	-	1.2e-54	184.2	1.0	1.4e-54	184.0	1.0	1.0	1	0	0	1	1	1	1	ArsR	transcriptional	regulator
Pyr_redox_2	PF07992.14	gi|289596173|ref|YP_003482869.1|	-	1.8e-44	152.2	0.1	2.6e-44	151.6	0.1	1.2	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.22	gi|289596173|ref|YP_003482869.1|	-	2.5e-23	82.4	0.3	5.9e-23	81.2	0.3	1.7	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.27	gi|289596173|ref|YP_003482869.1|	-	1.4e-13	51.2	0.1	4.8e-13	49.5	0.1	2.0	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.17	gi|289596173|ref|YP_003482869.1|	-	0.0013	18.1	0.0	0.11	11.7	0.0	2.4	2	0	0	2	2	2	1	Thi4	family
TFIIE_beta	PF02186.15	gi|289596173|ref|YP_003482869.1|	-	0.0064	16.7	0.0	0.03	14.6	0.0	2.1	2	0	0	2	2	2	1	TFIIE	beta	subunit	core	domain
K_oxygenase	PF13434.6	gi|289596173|ref|YP_003482869.1|	-	0.011	14.9	0.0	0.16	11.1	0.0	2.2	1	1	1	2	2	2	0	L-lysine	6-monooxygenase	(NADPH-requiring)
UDPG_MGDP_dh_N	PF03721.14	gi|289596173|ref|YP_003482869.1|	-	0.018	14.6	0.0	0.033	13.8	0.0	1.4	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
NAD_binding_8	PF13450.6	gi|289596173|ref|YP_003482869.1|	-	0.024	14.9	0.0	0.86	9.9	0.0	2.6	2	0	0	2	2	2	0	NAD(P)-binding	Rossmann-like	domain
PAS_9	PF13426.7	gi|289596174|ref|YP_003482870.1|	-	2.3e-51	172.4	9.4	2.4e-18	66.3	0.1	5.4	4	1	1	5	5	5	3	PAS	domain
PAS	PF00989.25	gi|289596174|ref|YP_003482870.1|	-	4.9e-46	155.4	0.2	8.7e-14	51.5	0.0	4.4	4	0	0	4	4	4	3	PAS	fold
GAF_2	PF13185.6	gi|289596174|ref|YP_003482870.1|	-	1.2e-40	139.0	0.0	8.5e-15	55.3	0.0	4.3	5	0	0	5	5	4	3	GAF	domain
PAS_3	PF08447.12	gi|289596174|ref|YP_003482870.1|	-	5.3e-31	106.8	0.0	3.3e-09	36.9	0.0	3.6	3	0	0	3	3	3	3	PAS	fold
GAF_3	PF13492.6	gi|289596174|ref|YP_003482870.1|	-	5.8e-31	107.5	0.0	2.3e-10	40.9	0.0	3.4	3	0	0	3	3	3	3	GAF	domain
PAS_4	PF08448.10	gi|289596174|ref|YP_003482870.1|	-	5.2e-25	87.8	0.0	4e-08	33.5	0.0	4.6	4	1	0	4	4	4	3	PAS	fold
PAS_8	PF13188.7	gi|289596174|ref|YP_003482870.1|	-	2.7e-23	81.5	0.3	5e-06	26.4	0.0	4.2	4	0	0	4	4	4	3	PAS	domain
HATPase_c	PF02518.26	gi|289596174|ref|YP_003482870.1|	-	1.3e-18	67.5	0.0	3.8e-18	66.0	0.0	1.8	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
GAF	PF01590.26	gi|289596174|ref|YP_003482870.1|	-	2.3e-18	67.1	0.0	1.4e-05	25.7	0.0	3.8	4	0	0	4	4	4	3	GAF	domain
PAS_10	PF13596.6	gi|289596174|ref|YP_003482870.1|	-	1.5e-12	48.1	1.0	0.0023	18.5	0.0	4.3	4	0	0	4	4	4	3	PAS	domain
HisKA	PF00512.25	gi|289596174|ref|YP_003482870.1|	-	5e-10	39.3	0.3	3.6e-09	36.5	0.1	2.7	2	0	0	2	2	2	1	His	Kinase	A	(phospho-acceptor)	domain
SpoVT_C	PF15714.5	gi|289596174|ref|YP_003482870.1|	-	2.1e-08	34.3	0.7	0.017	15.2	0.0	3.7	4	0	0	4	4	3	2	Stage	V	sporulation	protein	T	C-terminal,	transcription	factor
PAS_7	PF12860.7	gi|289596174|ref|YP_003482870.1|	-	3.1e-07	30.6	0.7	0.069	13.3	0.0	4.3	4	2	0	4	4	3	2	PAS	fold
PAS_12	PF18095.1	gi|289596174|ref|YP_003482870.1|	-	8.5e-07	28.7	1.3	0.2	11.3	0.1	3.9	3	0	0	3	3	3	2	UPF0242	C-terminal	PAS-like	domain
SPOB_a	PF14689.6	gi|289596174|ref|YP_003482870.1|	-	8.6e-06	25.4	0.4	3.3e-05	23.5	0.4	2.1	1	0	0	1	1	1	1	Sensor_kinase_SpoOB-type,	alpha-helical	domain
HATPase_c_2	PF13581.6	gi|289596174|ref|YP_003482870.1|	-	2.5e-05	24.2	0.0	4.5e-05	23.4	0.0	1.4	1	0	0	1	1	1	1	Histidine	kinase-like	ATPase	domain
Bro-N	PF02498.17	gi|289596174|ref|YP_003482870.1|	-	0.00065	20.3	0.2	15	6.3	0.0	4.4	4	0	0	4	4	3	0	BRO	family,	N-terminal	domain
OTU	PF02338.19	gi|289596174|ref|YP_003482870.1|	-	0.0021	18.6	0.2	0.16	12.5	0.1	3.1	3	0	0	3	3	2	1	OTU-like	cysteine	protease
DUF3369	PF11849.8	gi|289596174|ref|YP_003482870.1|	-	0.0073	16.5	6.5	16	5.7	0.0	5.2	5	1	1	6	6	6	0	Domain	of	unknown	function	(DUF3369)
PAS_2	PF08446.11	gi|289596174|ref|YP_003482870.1|	-	0.021	15.5	0.0	0.66	10.7	0.0	3.0	3	0	0	3	3	2	0	PAS	fold
dCache_3	PF14827.6	gi|289596174|ref|YP_003482870.1|	-	0.03	14.0	0.0	36	3.9	0.0	3.9	4	0	0	4	4	4	0	Double	sensory	domain	of	two-component	sensor	kinase
HATPase_c_3	PF13589.6	gi|289596174|ref|YP_003482870.1|	-	0.062	13.1	0.0	0.14	11.9	0.0	1.6	1	0	0	1	1	1	0	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
PAS_11	PF14598.6	gi|289596174|ref|YP_003482870.1|	-	0.09	12.9	0.0	12	6.1	0.0	3.6	3	0	0	3	3	3	0	PAS	domain
DUF2111	PF09884.9	gi|289596174|ref|YP_003482870.1|	-	0.093	12.8	1.7	22	5.2	0.0	3.4	3	0	0	3	3	3	0	Uncharacterized	protein	conserved	in	archaea	(DUF2111)
DUF2976	PF11190.8	gi|289596174|ref|YP_003482870.1|	-	0.12	12.2	1.3	3.9	7.3	0.0	3.4	4	0	0	4	4	3	0	Protein	of	unknown	function	(DUF2976)
DUF1910	PF08928.10	gi|289596174|ref|YP_003482870.1|	-	3.6	7.6	9.7	0.19	11.7	0.3	3.4	4	0	0	4	4	3	0	Domain	of	unknown	function	(DUF1910)
DUF5344	PF17279.2	gi|289596174|ref|YP_003482870.1|	-	4.6	7.9	5.9	5.5	7.6	0.1	3.7	3	0	0	3	3	3	0	Family	of	unknown	function	(DUF5344)
AdoMet_dc	PF02675.15	gi|289596175|ref|YP_003482871.1|	-	2.1e-33	114.8	0.0	2.4e-33	114.6	0.0	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	decarboxylase
DUF43	PF01861.16	gi|289596176|ref|YP_003482872.1|	-	1e-82	277.0	1.4	1.3e-82	276.7	1.4	1.1	1	0	0	1	1	1	1	Branched-chain	polyamine	synthase	A	C-terminal	domain
N6-adenineMlase	PF10237.9	gi|289596176|ref|YP_003482872.1|	-	0.041	13.7	0.0	0.058	13.2	0.0	1.4	1	0	0	1	1	1	0	Probable	N6-adenine	methyltransferase
HTH_45	PF14947.6	gi|289596176|ref|YP_003482872.1|	-	0.041	13.9	0.3	0.1	12.6	0.3	1.7	1	0	0	1	1	1	0	Winged	helix-turn-helix
RcsD_ABL	PF16359.5	gi|289596176|ref|YP_003482872.1|	-	0.078	13.1	0.1	3.2	7.9	0.0	2.5	2	0	0	2	2	2	0	RcsD-ABL	domain
HemN_C	PF06969.16	gi|289596176|ref|YP_003482872.1|	-	0.11	12.5	0.0	0.39	10.8	0.0	1.9	1	0	0	1	1	1	0	HemN	C-terminal	domain
PvlArgDC	PF01862.16	gi|289596177|ref|YP_003482873.1|	-	5.1e-64	215.0	0.0	5.7e-64	214.8	0.0	1.0	1	0	0	1	1	1	1	Pyruvoyl-dependent	arginine	decarboxylase	(PvlArgDC)
DEAD	PF00270.29	gi|289596178|ref|YP_003482874.1|	-	3.9e-50	170.0	0.0	6.2e-49	166.1	0.0	2.1	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.31	gi|289596178|ref|YP_003482874.1|	-	2.3e-33	114.9	0.1	9.3e-32	109.7	0.2	2.6	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.15	gi|289596178|ref|YP_003482874.1|	-	1.2e-05	25.4	0.0	3.6e-05	23.8	0.0	1.8	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
UTP25	PF06862.12	gi|289596178|ref|YP_003482874.1|	-	0.002	17.0	0.0	0.86	8.3	0.0	2.3	1	1	1	2	2	2	2	Utp25,	U3	small	nucleolar	RNA-associated	SSU	processome	protein	25
Flavi_DEAD	PF07652.14	gi|289596178|ref|YP_003482874.1|	-	0.012	15.6	0.1	0.06	13.3	0.0	2.1	3	0	0	3	3	3	0	Flavivirus	DEAD	domain
AAA_19	PF13245.6	gi|289596178|ref|YP_003482874.1|	-	0.078	13.3	0.2	8.9	6.6	0.1	2.3	1	1	1	2	2	2	0	AAA	domain
PHF5	PF03660.14	gi|289596179|ref|YP_003482875.1|	-	0.0011	19.1	0.3	0.0011	19.1	0.3	1.1	1	0	0	1	1	1	1	PHF5-like	protein
Gin	PF10764.9	gi|289596179|ref|YP_003482875.1|	-	0.0088	16.0	1.4	0.035	14.1	1.4	1.9	1	1	0	1	1	1	1	Inhibitor	of	sigma-G	Gin
C1_2	PF03107.16	gi|289596179|ref|YP_003482875.1|	-	0.014	15.7	1.4	0.014	15.7	1.4	1.5	2	0	0	2	2	2	0	C1	domain
Cript	PF10235.9	gi|289596179|ref|YP_003482875.1|	-	0.016	15.8	0.3	0.023	15.3	0.3	1.3	1	0	0	1	1	1	0	Microtubule-associated	protein	CRIPT
zf-RING_10	PF16685.5	gi|289596179|ref|YP_003482875.1|	-	0.017	15.2	0.2	0.018	15.2	0.2	1.1	1	0	0	1	1	1	0	zinc	RING	finger	of	MSL2
Ribosomal_L37e	PF01907.19	gi|289596179|ref|YP_003482875.1|	-	0.022	14.9	0.1	0.028	14.6	0.1	1.2	1	0	0	1	1	1	0	Ribosomal	protein	L37e
PLATZ	PF04640.14	gi|289596179|ref|YP_003482875.1|	-	0.092	13.4	1.9	0.8	10.4	1.0	2.1	2	0	0	2	2	2	0	PLATZ	transcription	factor
DUF4974	PF16344.5	gi|289596180|ref|YP_003482876.1|	-	0.025	14.6	0.7	0.18	11.8	0.1	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4974)
Band_7	PF01145.25	gi|289596181|ref|YP_003482877.1|	-	6.7e-38	130.5	4.0	1.3e-37	129.6	4.0	1.6	1	1	0	1	1	1	1	SPFH	domain	/	Band	7	family
Band_7_1	PF13421.6	gi|289596181|ref|YP_003482877.1|	-	0.0054	16.5	0.1	0.0089	15.8	0.1	1.4	1	0	0	1	1	1	1	SPFH	domain-Band	7	family
MecA	PF05389.12	gi|289596181|ref|YP_003482877.1|	-	0.11	12.2	4.8	0.84	9.2	4.8	2.2	1	1	0	1	1	1	0	Negative	regulator	of	genetic	competence	(MecA)
AAA_11	PF13086.6	gi|289596181|ref|YP_003482877.1|	-	0.22	11.2	5.0	0.76	9.5	0.2	2.0	1	1	1	2	2	2	0	AAA	domain
NfeD	PF01957.18	gi|289596182|ref|YP_003482878.1|	-	6e-17	61.8	3.8	6e-17	61.8	3.8	1.6	2	0	0	2	2	2	1	NfeD-like	C-terminal,	partner-binding
DUF1418	PF07214.12	gi|289596182|ref|YP_003482878.1|	-	4.3	7.3	9.7	9.2	6.2	9.7	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1418)
AAA	PF00004.29	gi|289596184|ref|YP_003482880.1|	-	2e-13	50.9	0.3	4.5e-12	46.5	0.0	2.5	1	1	1	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Rad17	PF03215.15	gi|289596184|ref|YP_003482880.1|	-	1.5e-09	38.1	0.0	8.7e-09	35.6	0.0	2.0	1	1	1	2	2	2	1	Rad17	P-loop	domain
DNA_pol3_delta	PF06144.13	gi|289596184|ref|YP_003482880.1|	-	6.7e-07	29.2	0.0	1.4e-06	28.2	0.0	1.4	1	0	0	1	1	1	1	DNA	polymerase	III,	delta	subunit
AAA_22	PF13401.6	gi|289596184|ref|YP_003482880.1|	-	7.5e-06	26.3	0.2	0.0069	16.7	0.1	3.0	2	1	1	3	3	2	1	AAA	domain
Zeta_toxin	PF06414.12	gi|289596184|ref|YP_003482880.1|	-	8.7e-06	25.1	0.0	1.9e-05	24.0	0.0	1.5	1	0	0	1	1	1	1	Zeta	toxin
RuvB_N	PF05496.12	gi|289596184|ref|YP_003482880.1|	-	2.3e-05	24.2	0.0	6.2e-05	22.8	0.0	1.7	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_assoc_2	PF16193.5	gi|289596184|ref|YP_003482880.1|	-	6.3e-05	23.2	0.3	0.0005	20.3	0.1	2.4	2	0	0	2	2	2	1	AAA	C-terminal	domain
AAA_24	PF13479.6	gi|289596184|ref|YP_003482880.1|	-	6.7e-05	22.7	0.2	0.00041	20.1	0.1	2.3	3	0	0	3	3	2	1	AAA	domain
AAA_14	PF13173.6	gi|289596184|ref|YP_003482880.1|	-	8.6e-05	22.6	0.6	0.00023	21.2	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_18	PF13238.6	gi|289596184|ref|YP_003482880.1|	-	8.7e-05	23.1	0.1	0.00024	21.7	0.1	1.8	1	0	0	1	1	1	1	AAA	domain
DUF815	PF05673.13	gi|289596184|ref|YP_003482880.1|	-	0.00011	21.5	0.0	0.00032	19.9	0.0	1.7	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF815)
AAA_16	PF13191.6	gi|289596184|ref|YP_003482880.1|	-	0.00012	22.5	0.0	0.00024	21.5	0.0	1.5	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_5	PF07728.14	gi|289596184|ref|YP_003482880.1|	-	0.00014	21.9	0.0	0.00033	20.7	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
RFC1	PF08519.12	gi|289596184|ref|YP_003482880.1|	-	0.00023	21.4	0.2	0.00039	20.6	0.2	1.3	1	0	0	1	1	1	1	Replication	factor	RFC1	C	terminal	domain
AAA_30	PF13604.6	gi|289596184|ref|YP_003482880.1|	-	0.00066	19.4	0.1	0.0057	16.4	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
AAA_28	PF13521.6	gi|289596184|ref|YP_003482880.1|	-	0.00084	19.6	0.2	0.0022	18.3	0.0	1.8	2	0	0	2	2	1	1	AAA	domain
ABC_tran	PF00005.27	gi|289596184|ref|YP_003482880.1|	-	0.0012	19.4	0.1	0.0039	17.7	0.1	1.9	1	1	0	1	1	1	1	ABC	transporter
DUF2075	PF09848.9	gi|289596184|ref|YP_003482880.1|	-	0.0014	17.9	0.0	0.016	14.5	0.0	2.2	1	1	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_33	PF13671.6	gi|289596184|ref|YP_003482880.1|	-	0.0016	18.6	0.0	0.003	17.7	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
Viral_helicase1	PF01443.18	gi|289596184|ref|YP_003482880.1|	-	0.0061	16.3	0.0	0.013	15.2	0.0	1.6	1	0	0	1	1	1	1	Viral	(Superfamily	1)	RNA	helicase
AAA_17	PF13207.6	gi|289596184|ref|YP_003482880.1|	-	0.0064	16.9	0.1	0.039	14.4	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
TIP49	PF06068.13	gi|289596184|ref|YP_003482880.1|	-	0.0067	15.7	0.0	0.012	14.9	0.0	1.3	1	0	0	1	1	1	1	TIP49	P-loop	domain
tRNA_lig_kinase	PF08303.11	gi|289596184|ref|YP_003482880.1|	-	0.0074	16.4	0.0	0.02	15.0	0.0	1.8	1	0	0	1	1	1	1	tRNA	ligase	kinase	domain
NACHT	PF05729.12	gi|289596184|ref|YP_003482880.1|	-	0.011	15.6	0.2	0.032	14.2	0.2	1.8	1	1	0	1	1	1	0	NACHT	domain
SKI	PF01202.22	gi|289596184|ref|YP_003482880.1|	-	0.011	15.8	0.0	0.024	14.8	0.0	1.6	1	0	0	1	1	1	0	Shikimate	kinase
TniB	PF05621.11	gi|289596184|ref|YP_003482880.1|	-	0.012	15.1	0.0	8.8	5.7	0.0	3.0	3	0	0	3	3	3	0	Bacterial	TniB	protein
ADK	PF00406.22	gi|289596184|ref|YP_003482880.1|	-	0.013	15.6	0.0	0.032	14.3	0.0	1.6	1	0	0	1	1	1	0	Adenylate	kinase
RNA_helicase	PF00910.22	gi|289596184|ref|YP_003482880.1|	-	0.015	15.7	0.0	0.04	14.3	0.0	1.8	1	0	0	1	1	1	0	RNA	helicase
AAA_2	PF07724.14	gi|289596184|ref|YP_003482880.1|	-	0.016	15.3	0.0	0.049	13.8	0.0	1.7	2	0	0	2	2	2	0	AAA	domain	(Cdc48	subfamily)
Bac_DnaA	PF00308.18	gi|289596184|ref|YP_003482880.1|	-	0.026	14.4	1.4	4.9	6.9	0.1	3.1	3	0	0	3	3	3	0	Bacterial	dnaA	protein
TsaE	PF02367.17	gi|289596184|ref|YP_003482880.1|	-	0.075	13.0	0.0	0.16	12.0	0.0	1.5	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
PduV-EutP	PF10662.9	gi|289596184|ref|YP_003482880.1|	-	0.078	12.7	0.0	0.2	11.4	0.0	1.7	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
NTPase_1	PF03266.15	gi|289596184|ref|YP_003482880.1|	-	0.083	12.8	0.1	2	8.3	0.0	2.5	2	0	0	2	2	2	0	NTPase
AAA_3	PF07726.11	gi|289596184|ref|YP_003482880.1|	-	0.094	12.6	0.0	2.5	8.0	0.0	2.3	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Mg_chelatase	PF01078.21	gi|289596184|ref|YP_003482880.1|	-	0.11	11.9	0.0	0.18	11.1	0.0	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_25	PF13481.6	gi|289596184|ref|YP_003482880.1|	-	0.11	12.1	0.0	0.65	9.5	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
AAA_6	PF12774.7	gi|289596184|ref|YP_003482880.1|	-	0.13	11.2	0.0	0.26	10.2	0.0	1.4	1	0	0	1	1	1	0	Hydrolytic	ATP	binding	site	of	dynein	motor	region
AAA_19	PF13245.6	gi|289596184|ref|YP_003482880.1|	-	0.17	12.2	0.1	1.2	9.4	0.0	2.4	3	0	0	3	3	2	0	AAA	domain
ThiG	PF05690.14	gi|289596186|ref|YP_003482882.1|	-	5.3e-09	35.8	1.1	9.5e-09	34.9	0.7	1.6	2	0	0	2	2	2	1	Thiazole	biosynthesis	protein	ThiG
TIM	PF00121.18	gi|289596186|ref|YP_003482882.1|	-	4.1e-07	29.6	0.1	1.1e-06	28.2	0.0	1.7	1	1	1	2	2	2	1	Triosephosphate	isomerase
FMN_dh	PF01070.18	gi|289596186|ref|YP_003482882.1|	-	9.4e-07	28.2	0.7	1.6e-06	27.4	0.7	1.4	1	0	0	1	1	1	1	FMN-dependent	dehydrogenase
Trp_syntA	PF00290.20	gi|289596186|ref|YP_003482882.1|	-	1.2e-06	27.6	2.4	2.1e-06	26.8	2.4	1.6	1	1	0	1	1	1	1	Tryptophan	synthase	alpha	chain
NMO	PF03060.15	gi|289596186|ref|YP_003482882.1|	-	2.3e-06	27.2	0.4	7.6e-06	25.5	0.3	1.7	2	0	0	2	2	2	1	Nitronate	monooxygenase
His_biosynth	PF00977.21	gi|289596186|ref|YP_003482882.1|	-	6.8e-06	25.7	0.3	1.8e-05	24.4	0.1	1.8	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
IGPS	PF00218.21	gi|289596186|ref|YP_003482882.1|	-	0.0009	18.5	0.5	0.0011	18.2	0.5	1.2	1	0	0	1	1	1	1	Indole-3-glycerol	phosphate	synthase
IMPDH	PF00478.25	gi|289596186|ref|YP_003482882.1|	-	0.0014	17.7	0.5	0.0034	16.4	0.5	1.6	1	1	0	1	1	1	1	IMP	dehydrogenase	/	GMP	reductase	domain
PcrB	PF01884.17	gi|289596186|ref|YP_003482882.1|	-	0.0076	15.7	0.5	0.012	15.1	0.2	1.6	2	0	0	2	2	2	1	PcrB	family
DHO_dh	PF01180.21	gi|289596186|ref|YP_003482882.1|	-	0.011	14.9	0.8	0.015	14.5	0.8	1.5	1	1	0	1	1	1	0	Dihydroorotate	dehydrogenase
Glu_synthase	PF01645.17	gi|289596186|ref|YP_003482882.1|	-	0.033	13.3	0.1	0.064	12.4	0.1	1.4	1	0	0	1	1	1	0	Conserved	region	in	glutamate	synthase
G3P_antiterm	PF04309.12	gi|289596186|ref|YP_003482882.1|	-	0.072	12.5	1.9	0.095	12.1	0.4	2.0	2	1	0	2	2	2	0	Glycerol-3-phosphate	responsive	antiterminator
Hydrolase_like	PF13242.6	gi|289596186|ref|YP_003482882.1|	-	0.077	13.1	0.1	0.25	11.4	0.1	1.9	1	0	0	1	1	1	0	HAD-hyrolase-like
POC1	PF10450.9	gi|289596186|ref|YP_003482882.1|	-	0.12	11.3	0.1	0.18	10.8	0.1	1.2	1	0	0	1	1	1	0	POC1	chaperone
Dus	PF01207.17	gi|289596186|ref|YP_003482882.1|	-	0.13	11.3	0.3	0.26	10.4	0.1	1.5	2	0	0	2	2	2	0	Dihydrouridine	synthase	(Dus)
PIG-P	PF08510.12	gi|289596187|ref|YP_003482883.1|	-	0.00088	19.2	1.0	0.0013	18.7	1.0	1.4	1	0	0	1	1	1	1	PIG-P
DUF4131	PF13567.6	gi|289596187|ref|YP_003482883.1|	-	0.031	13.9	1.4	0.046	13.4	0.7	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
DUF1772	PF08592.11	gi|289596187|ref|YP_003482883.1|	-	0.046	14.0	0.2	0.066	13.5	0.2	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1772)
DUF1516	PF07457.11	gi|289596187|ref|YP_003482883.1|	-	0.22	11.7	7.9	0.7	10.1	7.9	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1516)
DUF2101	PF09874.9	gi|289596187|ref|YP_003482883.1|	-	3.2	7.4	9.6	5	6.8	9.7	1.3	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2101)
DUF4181	PF13789.6	gi|289596187|ref|YP_003482883.1|	-	3.7	7.9	11.3	20	5.5	11.1	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4181)
tRNA_NucTransf2	PF09249.11	gi|289596188|ref|YP_003482884.1|	-	4.3e-41	139.7	0.0	8.7e-41	138.7	0.0	1.5	1	0	0	1	1	1	1	tRNA	nucleotidyltransferase,	second	domain
NTP_transf_2	PF01909.23	gi|289596188|ref|YP_003482884.1|	-	2.5e-17	62.9	0.0	6.1e-17	61.7	0.0	1.7	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
Polbeta	PF18765.1	gi|289596188|ref|YP_003482884.1|	-	0.0034	17.4	0.0	0.011	15.8	0.0	1.9	1	0	0	1	1	1	1	Polymerase	beta,	Nucleotidyltransferase
SMODS	PF18144.1	gi|289596188|ref|YP_003482884.1|	-	0.044	14.0	0.0	0.33	11.1	0.0	2.2	1	1	0	1	1	1	0	Second	Messenger	Oligonucleotide	or	Dinucleotide	Synthetase	domain
NAC	PF01849.18	gi|289596189|ref|YP_003482885.1|	-	8e-11	41.8	1.4	1.3e-10	41.1	0.5	1.7	2	1	1	3	3	3	1	NAC	domain
UBA_4	PF14555.6	gi|289596189|ref|YP_003482885.1|	-	0.0012	18.6	0.0	0.0018	18.1	0.0	1.3	1	0	0	1	1	1	1	UBA-like	domain
Cytidylate_kin2	PF13189.6	gi|289596189|ref|YP_003482885.1|	-	0.005	17.0	0.2	0.0085	16.2	0.2	1.4	1	1	0	1	1	1	1	Cytidylate	kinase-like	family
RRF_GI	PF12614.8	gi|289596189|ref|YP_003482885.1|	-	0.012	15.8	2.5	0.17	12.1	2.5	2.2	1	1	0	1	1	1	0	Ribosome	recycling	factor
ANTAR	PF03861.14	gi|289596189|ref|YP_003482885.1|	-	0.014	15.2	0.9	0.14	12.0	0.1	2.2	2	0	0	2	2	2	0	ANTAR	domain
Gp_dh_N	PF00044.24	gi|289596189|ref|YP_003482885.1|	-	0.017	15.5	0.2	0.024	15.0	0.2	1.4	1	1	0	1	1	1	0	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
HOIP-UBA	PF16678.5	gi|289596189|ref|YP_003482885.1|	-	0.15	12.1	3.8	0.24	11.4	3.8	1.6	1	1	0	1	1	1	0	HOIP	UBA	domain	pair
NRDD	PF13597.6	gi|289596190|ref|YP_003482886.1|	-	2.3e-185	617.6	0.0	2.6e-185	617.4	0.0	1.0	1	0	0	1	1	1	1	Anaerobic	ribonucleoside-triphosphate	reductase
DHNA	PF04038.12	gi|289596190|ref|YP_003482886.1|	-	0.088	13.3	0.0	0.35	11.4	0.0	2.0	2	0	0	2	2	2	0	Dihydroneopterin	aldolase
Radical_SAM	PF04055.21	gi|289596191|ref|YP_003482887.1|	-	1.1e-23	84.5	0.1	1.5e-23	84.0	0.1	1.2	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|289596191|ref|YP_003482887.1|	-	2e-10	41.1	0.1	5.8e-10	39.6	0.0	1.8	2	1	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|289596191|ref|YP_003482887.1|	-	7.5e-10	39.0	0.1	1e-08	35.3	0.0	2.2	2	1	0	2	2	2	1	4Fe-4S	single	cluster	domain
HSDR_N	PF04313.14	gi|289596192|ref|YP_003482888.1|	-	2.9e-09	37.2	0.3	2.6e-05	24.3	0.0	2.8	2	1	1	3	3	3	2	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
HSDR_N_2	PF13588.6	gi|289596192|ref|YP_003482888.1|	-	0.00038	20.4	0.0	0.00083	19.3	0.0	1.6	1	0	0	1	1	1	1	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
SfsA	PF03749.13	gi|289596192|ref|YP_003482888.1|	-	0.0017	18.3	0.0	0.0031	17.4	0.0	1.4	1	0	0	1	1	1	1	Sugar	fermentation	stimulation	protein	RE	domain
SeqA	PF03925.13	gi|289596192|ref|YP_003482888.1|	-	0.0066	16.4	0.0	0.023	14.6	0.0	1.9	1	0	0	1	1	1	1	SeqA	protein	C-terminal	domain
PDDEXK_3	PF13366.6	gi|289596192|ref|YP_003482888.1|	-	0.0069	16.7	0.1	0.018	15.4	0.1	1.6	1	0	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
VRR_NUC	PF08774.11	gi|289596192|ref|YP_003482888.1|	-	0.05	13.7	0.1	0.14	12.2	0.1	1.7	1	0	0	1	1	1	0	VRR-NUC	domain
MFS_1	PF07690.16	gi|289596193|ref|YP_003482889.1|	-	2e-50	171.7	51.1	2e-50	171.7	51.1	2.4	2	1	0	2	2	2	1	Major	Facilitator	Superfamily
MFS_3	PF05977.13	gi|289596193|ref|YP_003482889.1|	-	0.0031	16.0	15.4	0.0031	16.0	15.4	2.3	2	1	0	2	2	2	1	Transmembrane	secretion	effector
HEPN_Swt1	PF18731.1	gi|289596194|ref|YP_003482890.1|	-	0.0084	16.5	0.2	0.021	15.1	0.2	1.6	1	0	0	1	1	1	1	Swt1-like	HEPN
HEPN	PF05168.14	gi|289596194|ref|YP_003482890.1|	-	0.083	13.0	1.6	0.51	10.5	0.0	2.5	2	1	1	3	3	3	0	HEPN	domain
HEPN_Apea	PF18739.1	gi|289596194|ref|YP_003482890.1|	-	0.25	11.8	5.0	0.13	12.7	1.9	2.2	2	1	0	2	2	2	0	Apea-like	HEPN
Ion_trans_2	PF07885.16	gi|289596195|ref|YP_003482891.1|	-	9.9e-14	51.1	12.0	9.9e-14	51.1	12.0	1.5	1	1	1	2	2	2	1	Ion	channel
FA_desaturase	PF00487.24	gi|289596195|ref|YP_003482891.1|	-	0.43	10.4	2.0	0.51	10.1	2.0	1.2	1	0	0	1	1	1	0	Fatty	acid	desaturase
TraG_N	PF07916.11	gi|289596195|ref|YP_003482891.1|	-	0.51	9.1	7.5	0.59	8.9	7.5	1.0	1	0	0	1	1	1	0	TraG-like	protein,	N-terminal	region
Ion_trans	PF00520.31	gi|289596195|ref|YP_003482891.1|	-	0.57	9.4	14.3	1.3	8.2	14.3	1.6	1	1	0	1	1	1	0	Ion	transport	protein
Glycos_transf_2	PF00535.26	gi|289596196|ref|YP_003482892.1|	-	2.1e-26	92.7	0.0	3.4e-26	92.0	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|289596196|ref|YP_003482892.1|	-	1.8e-18	67.3	0.0	4.4e-09	36.6	0.0	2.1	2	0	0	2	2	2	2	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.9	gi|289596196|ref|YP_003482892.1|	-	3.5e-14	52.9	0.2	3.2e-09	36.6	0.1	2.1	1	1	1	2	2	2	2	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.6	gi|289596196|ref|YP_003482892.1|	-	8e-06	25.9	0.1	2.7e-05	24.2	0.1	2.0	1	1	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_transf_7C	PF02709.14	gi|289596196|ref|YP_003482892.1|	-	0.00016	21.3	0.0	0.00032	20.3	0.0	1.5	1	0	0	1	1	1	1	N-terminal	domain	of	galactosyltransferase
Glyco_transf_21	PF13506.6	gi|289596196|ref|YP_003482892.1|	-	0.00035	20.1	0.0	0.003	17.1	0.0	2.0	1	1	0	1	1	1	1	Glycosyl	transferase	family	21
CRM1_repeat_2	PF18784.1	gi|289596196|ref|YP_003482892.1|	-	0.0031	17.1	0.1	0.0075	15.9	0.1	1.6	1	0	0	1	1	1	1	CRM1	/	Exportin	repeat	2
Glyco_tranf_2_4	PF13704.6	gi|289596196|ref|YP_003482892.1|	-	0.022	15.2	0.0	0.059	13.9	0.0	1.8	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
Glycos_transf_2	PF00535.26	gi|289596197|ref|YP_003482893.1|	-	7e-29	100.8	0.0	9.5e-29	100.4	0.0	1.1	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.6	gi|289596197|ref|YP_003482893.1|	-	9e-15	55.2	0.0	9.9e-15	55.0	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.9	gi|289596197|ref|YP_003482893.1|	-	3.5e-05	23.4	0.0	4.9e-05	22.9	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.6	gi|289596197|ref|YP_003482893.1|	-	0.11	13.1	0.0	0.32	11.5	0.0	1.9	1	1	0	1	1	1	0	Glycosyl	transferase	family	2
PCNA_N	PF00705.18	gi|289596198|ref|YP_003482894.1|	-	1.9e-12	47.0	0.2	5.4e-11	42.3	0.2	2.1	2	0	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	N-terminal	domain
PCNA_C	PF02747.15	gi|289596198|ref|YP_003482894.1|	-	7.7e-11	42.3	0.1	4.2e-10	39.9	0.0	2.2	2	2	1	3	3	3	1	Proliferating	cell	nuclear	antigen,	C-terminal	domain
Rad1	PF02144.16	gi|289596198|ref|YP_003482894.1|	-	0.0013	17.8	0.0	0.078	12.0	0.0	2.3	2	1	0	2	2	2	2	Repair	protein	Rad1/Rec1/Rad17
DNA_pol3_beta_2	PF02767.16	gi|289596198|ref|YP_003482894.1|	-	0.033	14.4	0.1	17	5.7	0.0	3.1	1	1	2	3	3	3	0	DNA	polymerase	III	beta	subunit,	central	domain
ParA	PF10609.9	gi|289596199|ref|YP_003482895.1|	-	3.4e-90	301.8	1.6	6.5e-90	300.9	1.6	1.4	1	1	0	1	1	1	1	NUBPL	iron-transfer	P-loop	NTPase
CbiA	PF01656.23	gi|289596199|ref|YP_003482895.1|	-	1.1e-19	70.8	0.0	1.5e-19	70.3	0.0	1.2	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.6	gi|289596199|ref|YP_003482895.1|	-	6.3e-14	52.3	2.4	6.7e-13	48.9	2.4	2.1	1	1	0	1	1	1	1	AAA	domain
ArsA_ATPase	PF02374.15	gi|289596199|ref|YP_003482895.1|	-	7.8e-08	31.9	0.8	9e-07	28.4	0.4	2.3	2	0	0	2	2	2	1	Anion-transporting	ATPase
MipZ	PF09140.11	gi|289596199|ref|YP_003482895.1|	-	9e-08	31.7	0.0	1.5e-07	31.0	0.0	1.4	1	1	0	1	1	1	1	ATPase	MipZ
Fer4_NifH	PF00142.18	gi|289596199|ref|YP_003482895.1|	-	5.2e-06	26.1	0.3	0.017	14.6	0.1	2.2	2	0	0	2	2	2	2	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
AAA_26	PF13500.6	gi|289596199|ref|YP_003482895.1|	-	0.00019	21.3	2.5	0.16	11.8	0.0	2.4	3	0	0	3	3	2	2	AAA	domain
AAA_25	PF13481.6	gi|289596199|ref|YP_003482895.1|	-	0.00019	21.1	0.2	0.0005	19.7	0.1	1.7	2	0	0	2	2	2	1	AAA	domain
APS_kinase	PF01583.20	gi|289596199|ref|YP_003482895.1|	-	0.00074	19.4	0.1	0.0012	18.8	0.1	1.3	1	0	0	1	1	1	1	Adenylylsulphate	kinase
NB-ARC	PF00931.22	gi|289596199|ref|YP_003482895.1|	-	0.0012	18.0	0.5	0.0021	17.3	0.5	1.3	1	0	0	1	1	1	1	NB-ARC	domain
VirC1	PF07015.11	gi|289596199|ref|YP_003482895.1|	-	0.0014	18.0	0.0	0.0023	17.3	0.0	1.3	1	0	0	1	1	1	1	VirC1	protein
SRP54	PF00448.22	gi|289596199|ref|YP_003482895.1|	-	0.0017	18.0	1.4	0.0027	17.3	0.5	1.8	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
CBP_BcsQ	PF06564.12	gi|289596199|ref|YP_003482895.1|	-	0.0034	16.9	0.4	0.093	12.2	0.2	2.1	2	0	0	2	2	2	1	Cellulose	biosynthesis	protein	BcsQ
RsgA_GTPase	PF03193.16	gi|289596199|ref|YP_003482895.1|	-	0.0068	16.3	0.2	0.012	15.5	0.2	1.3	1	0	0	1	1	1	1	RsgA	GTPase
PhoH	PF02562.16	gi|289596199|ref|YP_003482895.1|	-	0.0069	15.9	0.4	0.015	14.8	0.4	1.5	1	0	0	1	1	1	1	PhoH-like	protein
CLP1_P	PF16575.5	gi|289596199|ref|YP_003482895.1|	-	0.008	16.0	0.0	0.015	15.1	0.0	1.4	1	0	0	1	1	1	1	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
IstB_IS21	PF01695.17	gi|289596199|ref|YP_003482895.1|	-	0.0097	15.6	0.1	0.023	14.4	0.1	1.5	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
MobB	PF03205.14	gi|289596199|ref|YP_003482895.1|	-	0.011	15.7	0.1	0.023	14.6	0.1	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
MeaB	PF03308.16	gi|289596199|ref|YP_003482895.1|	-	0.018	14.1	0.2	0.034	13.1	0.2	1.4	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
TsaE	PF02367.17	gi|289596199|ref|YP_003482895.1|	-	0.05	13.6	0.5	0.095	12.7	0.5	1.4	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
NTPase_1	PF03266.15	gi|289596199|ref|YP_003482895.1|	-	0.074	13.0	0.5	0.16	11.9	0.5	1.5	1	0	0	1	1	1	0	NTPase
Rad17	PF03215.15	gi|289596199|ref|YP_003482895.1|	-	0.085	12.8	0.1	0.16	11.9	0.1	1.4	1	0	0	1	1	1	0	Rad17	P-loop	domain
ResIII	PF04851.15	gi|289596199|ref|YP_003482895.1|	-	0.09	12.8	0.1	0.39	10.7	0.4	1.8	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
AAA_16	PF13191.6	gi|289596199|ref|YP_003482895.1|	-	0.11	12.9	0.3	0.34	11.3	0.3	1.9	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA	PF00004.29	gi|289596199|ref|YP_003482895.1|	-	0.14	12.6	0.5	0.82	10.1	0.2	2.3	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_18	PF13238.6	gi|289596199|ref|YP_003482895.1|	-	0.16	12.5	0.1	0.16	12.5	0.1	1.8	2	0	0	2	2	1	0	AAA	domain
NACHT	PF05729.12	gi|289596199|ref|YP_003482895.1|	-	0.21	11.5	0.9	0.35	10.8	0.9	1.3	1	0	0	1	1	1	0	NACHT	domain
DAP3	PF10236.9	gi|289596199|ref|YP_003482895.1|	-	0.24	10.5	0.6	0.38	9.9	0.6	1.2	1	0	0	1	1	1	0	Mitochondrial	ribosomal	death-associated	protein	3
Thy1	PF02511.15	gi|289596200|ref|YP_003482896.1|	-	3.1e-61	206.5	0.3	3.7e-61	206.2	0.3	1.1	1	0	0	1	1	1	1	Thymidylate	synthase	complementing	protein
Kin17_mid	PF10357.9	gi|289596200|ref|YP_003482896.1|	-	0.037	13.9	0.0	3.8	7.5	0.0	2.4	2	0	0	2	2	2	0	Domain	of	Kin17	curved	DNA-binding	protein
tRNA_anti-codon	PF01336.25	gi|289596201|ref|YP_003482897.1|	-	0.0017	18.3	0.7	0.062	13.3	0.6	3.0	2	1	1	3	3	3	2	OB-fold	nucleic	acid	binding	domain
tRNA_anti-like	PF12869.7	gi|289596201|ref|YP_003482897.1|	-	0.007	16.0	1.4	0.01	15.5	0.2	1.8	1	1	1	2	2	2	1	tRNA_anti-like
PLDc_2	PF13091.6	gi|289596202|ref|YP_003482898.1|	-	1.4e-30	105.8	1.4	1.8e-30	105.5	1.4	1.1	1	0	0	1	1	1	1	PLD-like	domain
PLDc	PF00614.22	gi|289596202|ref|YP_003482898.1|	-	0.00012	22.1	0.5	0.00031	20.8	0.5	1.6	1	0	0	1	1	1	1	Phospholipase	D	Active	site	motif
DUF4006	PF13179.6	gi|289596202|ref|YP_003482898.1|	-	0.069	13.1	0.3	0.14	12.1	0.0	1.6	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF4006)
DUF2139	PF09910.9	gi|289596203|ref|YP_003482899.1|	-	8.5e-159	528.2	0.5	1.1e-158	527.8	0.5	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2139)
Peptidase_C69	PF03577.15	gi|289596204|ref|YP_003482900.1|	-	1.4e-07	30.8	1.9	2.1e-07	30.2	0.5	1.9	1	1	1	2	2	2	1	Peptidase	family	C69
AAT	PF03417.16	gi|289596204|ref|YP_003482900.1|	-	1.4e-05	24.9	0.0	2.8e-05	23.9	0.0	1.4	1	0	0	1	1	1	1	Acyl-coenzyme	A:6-aminopenicillanic	acid	acyl-transferase
DUF2031	PF09592.10	gi|289596204|ref|YP_003482900.1|	-	0.0063	16.1	3.4	0.0063	16.1	3.4	1.6	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2031)
ROK	PF00480.20	gi|289596205|ref|YP_003482901.1|	-	4.5e-42	144.5	0.9	1.2e-41	143.2	0.9	1.6	1	1	0	1	1	1	1	ROK	family
BcrAD_BadFG	PF01869.20	gi|289596205|ref|YP_003482901.1|	-	0.00058	19.4	0.3	0.53	9.7	0.1	2.3	2	0	0	2	2	2	2	BadF/BadG/BcrA/BcrD	ATPase	family
Glucokinase	PF02685.16	gi|289596205|ref|YP_003482901.1|	-	0.0038	16.3	0.2	0.079	11.9	0.1	2.4	2	1	0	2	2	2	1	Glucokinase
Hydant_A_N	PF05378.13	gi|289596205|ref|YP_003482901.1|	-	0.012	15.3	0.3	0.023	14.4	0.3	1.4	1	0	0	1	1	1	0	Hydantoinase/oxoprolinase	N-terminal	region
Glyco_hydro_1	PF00232.18	gi|289596206|ref|YP_003482902.1|	-	6.3e-91	305.1	9.7	8.3e-90	301.4	9.7	1.9	1	1	0	1	1	1	1	Glycosyl	hydrolase	family	1
Cellulase	PF00150.18	gi|289596206|ref|YP_003482902.1|	-	5e-11	42.6	0.1	1.2e-10	41.4	0.1	1.5	1	1	0	1	1	1	1	Cellulase	(glycosyl	hydrolase	family	5)
Glyco_hydro_cc	PF11790.8	gi|289596206|ref|YP_003482902.1|	-	0.058	12.9	0.5	0.17	11.4	0.1	1.8	2	0	0	2	2	2	0	Glycosyl	hydrolase	catalytic	core
MFS_1	PF07690.16	gi|289596207|ref|YP_003482903.1|	-	2.2e-54	184.7	43.4	2.4e-45	155.0	32.4	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.24	gi|289596207|ref|YP_003482903.1|	-	1.2e-14	54.1	28.4	9.4e-11	41.2	8.7	2.1	2	0	0	2	2	2	2	Sugar	(and	other)	transporter
MFS_1_like	PF12832.7	gi|289596207|ref|YP_003482903.1|	-	7.1e-06	25.1	27.1	0.0036	16.2	10.8	3.3	2	2	0	2	2	2	2	MFS_1	like	family
OATP	PF03137.20	gi|289596207|ref|YP_003482903.1|	-	0.015	13.6	0.6	0.015	13.6	0.6	4.1	3	1	1	4	4	4	0	Organic	Anion	Transporter	Polypeptide	(OATP)	family
Glyco_hydro_57	PF03065.15	gi|289596208|ref|YP_003482904.1|	-	5.2e-39	134.3	0.4	7.8e-39	133.8	0.4	1.2	1	0	0	1	1	1	1	Glycosyl	hydrolase	family	57
Polysacc_deac_1	PF01522.21	gi|289596208|ref|YP_003482904.1|	-	0.00053	19.9	0.0	0.00086	19.2	0.0	1.3	1	0	0	1	1	1	1	Polysaccharide	deacetylase
GalKase_gal_bdg	PF10509.9	gi|289596209|ref|YP_003482905.1|	-	2.2e-15	55.9	0.0	4.6e-15	54.9	0.0	1.6	1	0	0	1	1	1	1	Galactokinase	galactose-binding	signature
GHMP_kinases_C	PF08544.13	gi|289596209|ref|YP_003482905.1|	-	1.6e-14	54.0	0.0	4.3e-14	52.6	0.0	1.8	1	1	0	1	1	1	1	GHMP	kinases	C	terminal
GHMP_kinases_N	PF00288.26	gi|289596209|ref|YP_003482905.1|	-	1.9e-13	50.5	1.4	6.3e-13	48.8	0.0	2.1	2	0	0	2	2	2	1	GHMP	kinases	N	terminal	domain
2-Hacid_dh_C	PF02826.19	gi|289596210|ref|YP_003482906.1|	-	4.7e-42	143.4	0.0	9.6e-42	142.3	0.0	1.5	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.30	gi|289596210|ref|YP_003482906.1|	-	9.7e-11	41.5	0.0	1.2e-10	41.1	0.0	1.1	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
AdoHcyase_NAD	PF00670.21	gi|289596210|ref|YP_003482906.1|	-	0.00074	19.6	0.2	0.0064	16.6	0.1	2.3	2	2	0	2	2	2	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
PDH	PF02153.17	gi|289596210|ref|YP_003482906.1|	-	0.018	14.0	0.0	0.034	13.2	0.0	1.3	1	0	0	1	1	1	0	Prephenate	dehydrogenase
TPR_8	PF13181.6	gi|289596211|ref|YP_003482907.1|	-	6.7e-10	38.4	16.4	3.3e-07	30.0	0.7	4.5	4	1	1	5	5	5	2	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|289596211|ref|YP_003482907.1|	-	2.6e-09	36.5	7.7	3.6e-05	23.6	0.1	4.4	3	1	1	4	4	4	2	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|289596211|ref|YP_003482907.1|	-	1.9e-08	33.8	11.4	6.6e-07	28.9	0.3	4.3	3	1	1	4	4	4	2	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|289596211|ref|YP_003482907.1|	-	1.5e-07	31.5	5.5	0.0035	17.5	0.6	2.3	1	1	1	2	2	2	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_16	PF13432.6	gi|289596211|ref|YP_003482907.1|	-	3.7e-06	27.5	4.3	0.0002	21.9	0.3	3.5	2	1	0	3	3	3	1	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|289596211|ref|YP_003482907.1|	-	4.5e-06	27.0	2.3	0.0053	17.5	0.0	4.4	2	1	2	4	4	4	1	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|289596211|ref|YP_003482907.1|	-	5.1e-06	26.7	4.2	0.003	17.8	0.1	3.4	1	1	3	4	4	4	2	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|289596211|ref|YP_003482907.1|	-	6.6e-05	23.3	5.8	0.0031	18.0	0.1	3.6	3	0	0	3	3	3	1	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|289596211|ref|YP_003482907.1|	-	8.6e-05	23.0	6.5	0.23	12.0	0.4	3.5	2	1	1	3	3	3	2	Tetratricopeptide	repeat
RPN7	PF10602.9	gi|289596211|ref|YP_003482907.1|	-	0.0013	18.5	1.4	0.017	14.8	0.1	2.2	1	1	1	2	2	2	1	26S	proteasome	subunit	RPN7
TPR_11	PF13414.6	gi|289596211|ref|YP_003482907.1|	-	0.0016	18.1	7.6	0.18	11.5	0.1	3.9	3	1	1	4	4	4	2	TPR	repeat
TPR_7	PF13176.6	gi|289596211|ref|YP_003482907.1|	-	0.0044	16.9	3.1	0.039	14.0	0.2	3.4	4	0	0	4	4	4	1	Tetratricopeptide	repeat
TPR_10	PF13374.6	gi|289596211|ref|YP_003482907.1|	-	0.022	14.7	5.5	0.25	11.3	0.0	3.9	5	0	0	5	5	5	0	Tetratricopeptide	repeat
NARP1	PF12569.8	gi|289596211|ref|YP_003482907.1|	-	0.023	13.6	8.9	0.13	11.1	0.3	2.6	1	1	1	2	2	2	0	NMDA	receptor-regulated	protein	1
Caudo_TAP	PF02413.17	gi|289596211|ref|YP_003482907.1|	-	0.048	13.8	0.0	0.13	12.4	0.0	1.7	1	0	0	1	1	1	0	Caudovirales	tail	fibre	assembly	protein,	lambda	gpK
PPR	PF01535.20	gi|289596211|ref|YP_003482907.1|	-	0.071	13.4	1.1	16	6.0	0.0	3.6	4	1	1	5	5	4	0	PPR	repeat
Wzy_C_2	PF11846.8	gi|289596211|ref|YP_003482907.1|	-	0.072	13.0	0.1	0.13	12.2	0.1	1.4	1	0	0	1	1	1	0	Virulence	factor	membrane-bound	polymerase,	C-terminal
TPR_17	PF13431.6	gi|289596211|ref|YP_003482907.1|	-	4.1	8.0	7.8	1.1e+02	3.5	0.0	4.9	5	1	0	5	5	5	0	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|289596212|ref|YP_003482908.1|	-	6.4e-41	136.6	39.6	9.6e-10	37.9	0.3	9.6	9	0	0	9	9	9	8	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|289596212|ref|YP_003482908.1|	-	5.3e-36	119.8	37.3	5.1e-07	29.3	0.1	10.3	10	0	0	10	10	9	8	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|289596212|ref|YP_003482908.1|	-	4e-30	101.5	42.7	0.00025	21.0	0.1	9.9	10	0	0	10	10	9	7	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|289596212|ref|YP_003482908.1|	-	9.5e-27	93.4	14.9	3.2e-06	27.7	0.1	6.2	6	0	0	6	6	6	4	Tetratricopeptide	repeat
TPR_19	PF14559.6	gi|289596212|ref|YP_003482908.1|	-	1.5e-25	89.4	21.1	9.6e-08	32.4	4.6	6.4	4	1	4	8	8	7	6	Tetratricopeptide	repeat
TPR_11	PF13414.6	gi|289596212|ref|YP_003482908.1|	-	1.5e-20	72.6	31.1	1.6e-09	37.3	1.6	7.7	4	1	4	8	8	8	3	TPR	repeat
TPR_17	PF13431.6	gi|289596212|ref|YP_003482908.1|	-	3.2e-20	71.0	18.6	0.0002	21.5	0.9	8.5	8	0	0	8	8	8	5	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|289596212|ref|YP_003482908.1|	-	2.4e-18	66.1	24.6	3.7e-08	33.5	0.0	6.3	4	3	3	7	7	7	5	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_14	PF13428.6	gi|289596212|ref|YP_003482908.1|	-	1.8e-17	62.6	16.3	0.018	15.8	0.1	9.0	4	3	5	9	9	8	4	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|289596212|ref|YP_003482908.1|	-	7.7e-16	58.2	25.4	1e-08	35.3	0.7	8.7	4	2	3	7	7	7	3	Tetratricopeptide	repeat
TPR_7	PF13176.6	gi|289596212|ref|YP_003482908.1|	-	3.6e-15	54.8	20.5	0.31	11.2	0.0	9.9	10	0	0	10	10	10	5	Tetratricopeptide	repeat
TPR_9	PF13371.6	gi|289596212|ref|YP_003482908.1|	-	2.5e-12	46.7	1.7	3.6e-05	23.8	0.1	5.4	2	2	3	5	5	5	2	Tetratricopeptide	repeat
TPR_10	PF13374.6	gi|289596212|ref|YP_003482908.1|	-	3.1e-09	36.4	26.4	0.056	13.3	0.1	9.0	9	0	0	9	9	9	3	Tetratricopeptide	repeat
TPR_15	PF13429.6	gi|289596212|ref|YP_003482908.1|	-	6.4e-09	35.4	9.7	0.087	12.0	1.1	5.9	2	1	4	7	7	7	3	Tetratricopeptide	repeat
TPR_21	PF09976.9	gi|289596212|ref|YP_003482908.1|	-	3e-05	23.8	18.7	0.011	15.5	0.0	5.4	3	1	2	5	5	5	3	Tetratricopeptide	repeat-like	domain
Mrr_cat	PF04471.12	gi|289596212|ref|YP_003482908.1|	-	0.00081	19.4	0.0	0.0035	17.3	0.0	2.2	1	1	1	2	2	2	1	Restriction	endonuclease
TPR_6	PF13174.6	gi|289596212|ref|YP_003482908.1|	-	0.00095	19.7	30.2	4.6	8.1	0.3	9.7	10	1	0	10	10	9	1	Tetratricopeptide	repeat
YfdX	PF10938.8	gi|289596212|ref|YP_003482908.1|	-	0.0011	18.9	12.1	7.8	6.4	0.0	6.3	6	1	0	6	6	6	0	YfdX	protein
SRP_TPR_like	PF17004.5	gi|289596212|ref|YP_003482908.1|	-	0.0014	18.6	3.4	0.0014	18.6	3.4	4.9	3	1	2	5	5	5	2	Putative	TPR-like	repeat
NRBF2_MIT	PF17169.4	gi|289596212|ref|YP_003482908.1|	-	0.0019	18.4	1.0	6.3	7.1	0.0	3.9	2	2	1	3	3	3	0	MIT	domain	of	nuclear	receptor-binding	factor	2
DUF3887	PF13026.6	gi|289596212|ref|YP_003482908.1|	-	0.0041	17.9	3.1	0.083	13.7	0.1	4.1	3	1	1	4	4	3	1	Protein	of	unknown	function	(DUF3887)
Fis1_TPR_C	PF14853.6	gi|289596212|ref|YP_003482908.1|	-	0.013	15.6	27.3	0.65	10.1	0.1	8.1	7	1	1	8	8	8	0	Fis1	C-terminal	tetratricopeptide	repeat
Coatomer_E	PF04733.14	gi|289596212|ref|YP_003482908.1|	-	0.015	14.8	15.1	0.027	13.9	0.7	4.3	3	1	1	4	4	4	0	Coatomer	epsilon	subunit
Alkyl_sulf_dimr	PF14863.6	gi|289596212|ref|YP_003482908.1|	-	0.048	14.1	0.0	0.048	14.1	0.0	4.3	3	1	2	5	5	5	0	Alkyl	sulfatase	dimerisation
TPR_20	PF14561.6	gi|289596212|ref|YP_003482908.1|	-	0.079	13.3	16.0	36	4.8	0.0	6.2	4	2	1	6	6	6	0	Tetratricopeptide	repeat
NurA	PF09376.10	gi|289596212|ref|YP_003482908.1|	-	0.085	12.5	0.9	0.42	10.3	0.4	2.4	2	0	0	2	2	2	0	NurA	domain
DUF3856	PF12968.7	gi|289596212|ref|YP_003482908.1|	-	0.096	12.8	6.6	0.63	10.1	0.0	4.8	3	2	0	3	3	2	0	Domain	of	Unknown	Function	(DUF3856)
MIT	PF04212.18	gi|289596212|ref|YP_003482908.1|	-	0.19	11.8	26.7	2.5	8.2	0.1	7.7	6	3	2	8	8	8	0	MIT	(microtubule	interacting	and	transport)	domain
HTH_Bact	PF18768.1	gi|289596212|ref|YP_003482908.1|	-	0.64	9.6	3.3	8.6	6.0	0.0	4.2	4	0	0	4	4	4	0	Helix-turn-helix	bacterial	domain
DUF1104	PF06518.11	gi|289596212|ref|YP_003482908.1|	-	1.4	9.3	14.9	0.45	10.9	0.2	4.4	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF1104)
PPR	PF01535.20	gi|289596212|ref|YP_003482908.1|	-	2.2	8.7	11.8	65	4.1	0.0	7.3	8	1	1	9	9	7	0	PPR	repeat
AcylCoA_dehyd_C	PF12186.8	gi|289596212|ref|YP_003482908.1|	-	5.8	7.1	8.7	11	6.2	0.9	3.3	3	1	0	3	3	2	0	Acyl-CoA	dehydrogenase	C	terminal
KELK	PF15796.5	gi|289596212|ref|YP_003482908.1|	-	6	7.4	15.6	8.3	6.9	6.5	3.4	2	1	1	3	3	2	0	KELK-motif	containing	domain	of	MRCK	Ser/Thr	protein	kinase
FliG_N	PF14842.6	gi|289596212|ref|YP_003482908.1|	-	6.5	7.4	15.3	0.58	10.7	0.2	4.3	4	1	1	5	5	3	0	FliG	N-terminal	domain
Fe-ADH_2	PF13685.6	gi|289596213|ref|YP_003482909.1|	-	3e-64	217.1	0.9	4.6e-64	216.5	0.9	1.2	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH	PF00465.19	gi|289596213|ref|YP_003482909.1|	-	1.7e-23	83.1	3.5	1.7e-22	79.8	3.5	1.9	1	1	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
DHQ_synthase	PF01761.20	gi|289596213|ref|YP_003482909.1|	-	8.5e-11	41.5	0.5	2.6e-10	39.9	0.5	1.8	1	1	0	1	1	1	1	3-dehydroquinate	synthase
UPF0179	PF03684.13	gi|289596214|ref|YP_003482910.1|	-	5.4e-52	175.4	1.9	6e-52	175.3	1.9	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0179)
MMR_HSR1_C	PF08438.10	gi|289596215|ref|YP_003482911.1|	-	1e-34	119.5	0.0	1.6e-34	118.9	0.0	1.3	1	0	0	1	1	1	1	GTPase	of	unknown	function	C-terminal
MMR_HSR1	PF01926.23	gi|289596215|ref|YP_003482911.1|	-	1.1e-19	70.6	0.0	2.9e-19	69.2	0.0	1.8	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
TGS	PF02824.21	gi|289596215|ref|YP_003482911.1|	-	1e-11	44.7	0.0	2.1e-11	43.7	0.0	1.5	1	0	0	1	1	1	1	TGS	domain
FeoB_N	PF02421.18	gi|289596215|ref|YP_003482911.1|	-	2.2e-09	37.0	0.0	5.4e-07	29.3	0.0	2.4	2	0	0	2	2	2	2	Ferrous	iron	transport	protein	B
YchF-GTPase_C	PF06071.13	gi|289596215|ref|YP_003482911.1|	-	0.00061	19.9	0.1	0.23	11.7	0.0	2.7	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF933)
RsgA_GTPase	PF03193.16	gi|289596215|ref|YP_003482911.1|	-	0.036	14.0	0.1	0.16	11.9	0.0	1.9	2	0	0	2	2	2	0	RsgA	GTPase
MMR_HSR1_Xtn	PF16897.5	gi|289596215|ref|YP_003482911.1|	-	0.038	14.0	0.0	0.091	12.8	0.0	1.7	1	0	0	1	1	1	0	C-terminal	region	of	MMR_HSR1	domain
ThiS	PF02597.20	gi|289596215|ref|YP_003482911.1|	-	0.062	14.0	0.1	1.3	9.8	0.0	2.4	2	0	0	2	2	2	0	ThiS	family
MotA_ExbB	PF01618.16	gi|289596216|ref|YP_003482912.1|	-	0.22	11.3	1.4	0.43	10.3	1.0	1.8	1	1	1	2	2	2	0	MotA/TolQ/ExbB	proton	channel	family
DUF2207	PF09972.9	gi|289596216|ref|YP_003482912.1|	-	0.26	10.0	1.9	0.29	9.8	1.9	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
Pilin_N	PF07790.11	gi|289596217|ref|YP_003482913.1|	-	2.5e-09	37.9	0.2	4.4e-09	37.1	0.2	1.4	1	0	0	1	1	1	1	Archaeal	Type	IV	pilin,	N-terminal
DUF4738	PF15889.5	gi|289596217|ref|YP_003482913.1|	-	0.043	13.7	0.0	0.095	12.5	0.0	1.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4738)
WIF	PF02019.18	gi|289596217|ref|YP_003482913.1|	-	0.062	13.0	1.8	0.14	11.9	0.1	1.9	1	1	1	2	2	2	0	WIF	domain
Pilin_N	PF07790.11	gi|289596218|ref|YP_003482914.1|	-	7.8e-11	42.7	2.1	7.8e-11	42.7	2.1	1.7	2	0	0	2	2	2	1	Archaeal	Type	IV	pilin,	N-terminal
EF-hand_6	PF13405.6	gi|289596218|ref|YP_003482914.1|	-	0.0035	17.1	0.1	0.31	11.1	0.0	2.4	2	0	0	2	2	2	1	EF-hand	domain
EF-hand_1	PF00036.32	gi|289596218|ref|YP_003482914.1|	-	0.24	11.0	0.7	3	7.6	0.1	2.3	2	0	0	2	2	2	0	EF	hand
TrkA_N	PF02254.18	gi|289596219|ref|YP_003482915.1|	-	1.1e-29	103.0	1.2	1.8e-29	102.4	1.2	1.3	1	0	0	1	1	1	1	TrkA-N	domain
TrkA_C	PF02080.21	gi|289596219|ref|YP_003482915.1|	-	3.4e-13	49.2	2.1	6e-13	48.4	1.1	1.9	2	0	0	2	2	2	1	TrkA-C	domain
F420_oxidored	PF03807.17	gi|289596219|ref|YP_003482915.1|	-	9.9e-09	35.7	0.4	3.3e-08	34.0	0.2	2.0	1	1	1	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_7	PF13241.6	gi|289596219|ref|YP_003482915.1|	-	1.7e-06	28.4	0.1	3.5e-06	27.4	0.1	1.6	1	0	0	1	1	1	1	Putative	NAD(P)-binding
Sacchrp_dh_NADP	PF03435.18	gi|289596219|ref|YP_003482915.1|	-	2.4e-05	24.6	0.3	5.9e-05	23.3	0.2	1.7	1	1	1	2	2	2	1	Saccharopine	dehydrogenase	NADP	binding	domain
NAD_binding_10	PF13460.6	gi|289596219|ref|YP_003482915.1|	-	4.9e-05	23.3	0.2	8.8e-05	22.5	0.2	1.5	1	1	0	1	1	1	1	NAD(P)H-binding
Shikimate_DH	PF01488.20	gi|289596219|ref|YP_003482915.1|	-	0.00013	22.0	0.1	0.00028	21.0	0.1	1.7	1	1	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
NAD_binding_2	PF03446.15	gi|289596219|ref|YP_003482915.1|	-	0.00014	22.1	0.4	0.0044	17.2	0.2	2.0	1	1	1	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NmrA	PF05368.13	gi|289596219|ref|YP_003482915.1|	-	0.0017	17.9	0.3	0.0043	16.7	0.3	1.8	1	1	1	2	2	2	1	NmrA-like	family
ApbA	PF02558.16	gi|289596219|ref|YP_003482915.1|	-	0.0019	17.9	0.1	0.0035	17.0	0.1	1.5	1	1	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
adh_short	PF00106.25	gi|289596219|ref|YP_003482915.1|	-	0.0064	16.0	0.4	0.014	14.9	0.4	1.8	1	1	0	1	1	1	1	short	chain	dehydrogenase
ADH_zinc_N	PF00107.26	gi|289596219|ref|YP_003482915.1|	-	0.0074	16.3	1.7	0.033	14.2	0.3	2.1	1	1	1	2	2	2	1	Zinc-binding	dehydrogenase
LtuB	PF17455.2	gi|289596219|ref|YP_003482915.1|	-	0.011	16.3	0.0	0.038	14.6	0.0	1.7	2	0	0	2	2	2	0	Late	transcription	unit	B
XdhC_C	PF13478.6	gi|289596219|ref|YP_003482915.1|	-	0.025	15.1	0.1	0.059	13.9	0.0	1.7	2	0	0	2	2	2	0	XdhC	Rossmann	domain
3HCDH_N	PF02737.18	gi|289596219|ref|YP_003482915.1|	-	0.029	14.3	0.0	0.045	13.6	0.0	1.3	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
UDPG_MGDP_dh_N	PF03721.14	gi|289596219|ref|YP_003482915.1|	-	0.033	13.8	0.3	0.033	13.8	0.3	1.8	2	1	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
GFO_IDH_MocA	PF01408.22	gi|289596219|ref|YP_003482915.1|	-	0.047	14.5	0.0	0.069	14.0	0.0	1.3	1	0	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
PALP	PF00291.25	gi|289596219|ref|YP_003482915.1|	-	0.055	12.9	0.2	0.071	12.5	0.2	1.2	1	0	0	1	1	1	0	Pyridoxal-phosphate	dependent	enzyme
Epimerase	PF01370.21	gi|289596219|ref|YP_003482915.1|	-	0.094	12.2	0.1	0.13	11.7	0.1	1.3	1	0	0	1	1	1	0	NAD	dependent	epimerase/dehydratase	family
Pyr_redox	PF00070.27	gi|289596219|ref|YP_003482915.1|	-	0.19	12.3	2.1	0.65	10.6	0.1	2.8	4	0	0	4	4	4	0	Pyridine	nucleotide-disulphide	oxidoreductase
TrkH	PF02386.16	gi|289596220|ref|YP_003482916.1|	-	7.9e-53	179.6	27.2	7.4e-51	173.1	27.1	2.2	1	1	0	1	1	1	1	Cation	transport	protein
COX8	PF02285.15	gi|289596220|ref|YP_003482916.1|	-	2.3	8.2	7.6	0.27	11.1	0.9	3.0	2	0	0	2	2	2	0	Cytochrome	oxidase	c	subunit	VIII
VCBS	PF13517.6	gi|289596221|ref|YP_003482917.1|	-	1.6e-12	47.8	31.3	9.1e-05	23.0	3.2	6.0	2	1	4	6	6	6	6	Repeat	domain	in	Vibrio,	Colwellia,	Bradyrhizobium	and	Shewanella
FG-GAP	PF01839.23	gi|289596221|ref|YP_003482917.1|	-	7.9e-12	45.1	22.9	0.062	13.4	0.3	6.8	6	0	0	6	6	6	5	FG-GAP	repeat
PQQ	PF01011.21	gi|289596221|ref|YP_003482917.1|	-	5.5e-05	22.9	6.3	0.38	10.8	0.0	6.3	7	0	0	7	7	7	1	PQQ	enzyme	repeat
PQQ_2	PF13360.6	gi|289596221|ref|YP_003482917.1|	-	8.8e-05	22.2	0.0	0.48	10.0	0.0	4.0	3	1	1	4	4	4	2	PQQ-like	domain
TcdB_toxin_midN	PF12256.8	gi|289596221|ref|YP_003482917.1|	-	0.00014	21.3	5.8	2.3	7.5	0.1	5.0	3	2	2	5	5	5	2	Insecticide	toxin	TcdB	middle/N-terminal	region
HypA	PF01155.19	gi|289596222|ref|YP_003482918.1|	-	0.0016	18.4	3.5	0.0051	16.8	1.1	2.0	1	1	1	2	2	2	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Zn-ribbon_8	PF09723.10	gi|289596222|ref|YP_003482918.1|	-	0.0023	18.0	1.7	0.0048	17.0	1.7	1.5	1	0	0	1	1	1	1	Zinc	ribbon	domain
NRDD	PF13597.6	gi|289596222|ref|YP_003482918.1|	-	0.0036	16.2	0.2	0.0042	15.9	0.2	1.1	1	0	0	1	1	1	1	Anaerobic	ribonucleoside-triphosphate	reductase
DZR	PF12773.7	gi|289596222|ref|YP_003482918.1|	-	0.011	15.7	1.7	0.037	14.0	1.8	1.5	1	1	1	2	2	2	0	Double	zinc	ribbon
HTH_37	PF13744.6	gi|289596222|ref|YP_003482918.1|	-	0.021	14.8	0.1	0.026	14.4	0.1	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
HalOD2	PF18547.1	gi|289596222|ref|YP_003482918.1|	-	0.025	14.5	1.7	1.1	9.2	0.7	2.3	2	0	0	2	2	2	0	Halobacterial	output	domain	2
MCM_OB	PF17207.3	gi|289596222|ref|YP_003482918.1|	-	0.025	14.4	1.2	0.031	14.1	1.2	1.3	1	1	0	1	1	1	0	MCM	OB	domain
TackOD1	PF18551.1	gi|289596222|ref|YP_003482918.1|	-	0.029	14.1	0.1	0.032	13.9	0.1	1.2	1	0	0	1	1	1	0	Thaumarchaeal	output	domain	1
IF2_N	PF04760.15	gi|289596222|ref|YP_003482918.1|	-	0.091	12.6	0.0	0.14	12.0	0.0	1.3	1	0	0	1	1	1	0	Translation	initiation	factor	IF-2,	N-terminal	region
HTH_11	PF08279.12	gi|289596222|ref|YP_003482918.1|	-	0.11	12.5	0.0	0.12	12.4	0.0	1.2	1	0	0	1	1	1	0	HTH	domain
TFIIS_C	PF01096.18	gi|289596222|ref|YP_003482918.1|	-	0.11	12.4	4.5	2.4	8.1	0.2	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zinc_ribbon_4	PF13717.6	gi|289596222|ref|YP_003482918.1|	-	0.16	12.0	7.8	0.65	10.0	0.3	2.6	3	0	0	3	3	3	0	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|289596222|ref|YP_003482918.1|	-	0.24	10.9	3.4	2.8	7.5	0.3	2.6	3	0	0	3	3	3	0	TFIIB	zinc-binding
zf-H2C2_2	PF13465.6	gi|289596222|ref|YP_003482918.1|	-	0.34	11.4	6.7	5.2	7.7	0.2	2.3	2	0	0	2	2	2	0	Zinc-finger	double	domain
DUF1451	PF07295.11	gi|289596222|ref|YP_003482918.1|	-	0.46	10.5	3.0	1.6	8.8	3.0	1.8	1	1	0	1	1	1	0	Zinc-ribbon	containing	domain
Rubredoxin_2	PF18073.1	gi|289596222|ref|YP_003482918.1|	-	0.81	9.5	7.3	1.2	8.9	0.6	2.2	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
DUF4379	PF14311.6	gi|289596222|ref|YP_003482918.1|	-	1.4	9.4	7.7	1.2	9.5	2.2	2.8	2	2	1	3	3	3	0	Probable	Zinc-ribbon	domain
UPF0547	PF10571.9	gi|289596222|ref|YP_003482918.1|	-	1.5	9.0	7.8	3.7	7.7	0.2	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zinc_ribbon_2	PF13240.6	gi|289596222|ref|YP_003482918.1|	-	6.8	6.6	9.7	22	4.9	9.7	1.9	1	1	0	1	1	1	0	zinc-ribbon	domain
QueH	PF02677.14	gi|289596223|ref|YP_003482919.1|	-	7.2e-57	192.3	3.8	8.1e-57	192.1	3.8	1.0	1	0	0	1	1	1	1	Epoxyqueuosine	reductase	QueH
SMC_ScpB	PF04079.16	gi|289596224|ref|YP_003482920.1|	-	4.4e-06	26.4	0.1	8.6e-06	25.5	0.0	1.5	1	1	1	2	2	2	1	Segregation	and	condensation	complex	subunit	ScpB
TrmB	PF01978.19	gi|289596224|ref|YP_003482920.1|	-	0.00038	20.3	0.2	0.00068	19.5	0.1	1.4	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.7	gi|289596224|ref|YP_003482920.1|	-	0.00099	19.0	0.0	0.0016	18.3	0.0	1.4	1	0	0	1	1	1	1	MarR	family
tRNA_int_endo	PF01974.17	gi|289596224|ref|YP_003482920.1|	-	0.025	14.6	0.1	0.61	10.2	0.0	2.1	2	0	0	2	2	2	0	tRNA	intron	endonuclease,	catalytic	C-terminal	domain
Bac_GDH	PF05088.12	gi|289596224|ref|YP_003482920.1|	-	0.056	10.9	0.1	0.059	10.9	0.1	1.0	1	0	0	1	1	1	0	Bacterial	NAD-glutamate	dehydrogenase
HTH_39	PF14090.6	gi|289596224|ref|YP_003482920.1|	-	0.082	12.7	0.0	0.16	11.7	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
RPA_C	PF08784.11	gi|289596224|ref|YP_003482920.1|	-	0.16	12.7	0.6	17	6.2	0.0	2.1	2	0	0	2	2	2	0	Replication	protein	A	C	terminal
Rib_5-P_isom_A	PF06026.14	gi|289596225|ref|YP_003482921.1|	-	1.1e-65	220.4	0.3	1.4e-65	220.1	0.3	1.1	1	0	0	1	1	1	1	Ribose	5-phosphate	isomerase	A	(phosphoriboisomerase	A)
DeoRC	PF00455.22	gi|289596225|ref|YP_003482921.1|	-	1.2e-05	25.3	0.6	0.00067	19.6	0.0	2.2	1	1	1	2	2	2	2	DeoR	C	terminal	sensor	domain
Sugar-bind	PF04198.13	gi|289596225|ref|YP_003482921.1|	-	0.035	13.2	0.1	0.061	12.4	0.0	1.5	2	0	0	2	2	2	0	Putative	sugar-binding	domain
HTH_20	PF12840.7	gi|289596226|ref|YP_003482922.1|	-	1e-11	44.7	0.0	1.4e-10	41.0	0.0	2.1	2	0	0	2	2	2	1	Helix-turn-helix	domain
TrmB	PF01978.19	gi|289596226|ref|YP_003482922.1|	-	2.7e-08	33.5	0.0	0.0046	16.8	0.0	2.6	2	0	0	2	2	2	2	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.7	gi|289596226|ref|YP_003482922.1|	-	1.1e-06	28.4	0.4	0.0019	18.0	0.0	2.3	2	0	0	2	2	2	2	MarR	family
HTH_24	PF13412.6	gi|289596226|ref|YP_003482922.1|	-	1.4e-06	27.8	0.0	1.6e-05	24.4	0.0	2.5	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.22	gi|289596226|ref|YP_003482922.1|	-	4.9e-05	23.2	0.6	0.0088	16.0	0.0	2.7	3	0	0	3	3	3	1	MarR	family
DUF4423	PF14394.6	gi|289596226|ref|YP_003482922.1|	-	0.0098	15.6	0.0	0.019	14.7	0.0	1.6	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
HTH_27	PF13463.6	gi|289596226|ref|YP_003482922.1|	-	0.022	15.2	0.1	0.58	10.7	0.0	2.4	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
HTH_5	PF01022.20	gi|289596226|ref|YP_003482922.1|	-	0.032	14.1	0.0	0.066	13.1	0.0	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
HTH_36	PF13730.6	gi|289596226|ref|YP_003482922.1|	-	0.081	12.9	0.0	14	5.7	0.0	2.4	2	0	0	2	2	2	0	Helix-turn-helix	domain
DUF2250	PF10007.9	gi|289596226|ref|YP_003482922.1|	-	0.1	12.7	0.0	1.2	9.3	0.0	2.2	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
B-block_TFIIIC	PF04182.12	gi|289596226|ref|YP_003482922.1|	-	0.1	12.7	0.0	0.25	11.5	0.0	1.6	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
Rrf2	PF02082.20	gi|289596226|ref|YP_003482922.1|	-	0.11	12.9	0.0	22	5.5	0.0	2.3	2	0	0	2	2	2	0	Transcriptional	regulator
ATPase	PF06745.13	gi|289596227|ref|YP_003482923.1|	-	3.8e-39	134.4	0.1	8.9e-39	133.2	0.0	1.6	1	1	0	1	1	1	1	KaiC
GvpD	PF07088.11	gi|289596227|ref|YP_003482923.1|	-	1.8e-06	26.9	0.0	6.3e-06	25.1	0.0	1.6	1	1	0	1	1	1	1	GvpD	gas	vesicle	protein
AAA_14	PF13173.6	gi|289596227|ref|YP_003482923.1|	-	3.5e-05	23.8	0.4	7.2e-05	22.8	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
AAA_24	PF13479.6	gi|289596227|ref|YP_003482923.1|	-	0.00012	21.9	0.1	0.00028	20.6	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
DnaB_C	PF03796.15	gi|289596227|ref|YP_003482923.1|	-	0.00073	18.9	0.1	0.0016	17.8	0.0	1.6	2	0	0	2	2	2	1	DnaB-like	helicase	C	terminal	domain
DUF87	PF01935.17	gi|289596227|ref|YP_003482923.1|	-	0.0018	18.5	3.4	0.18	11.9	0.3	2.6	1	1	1	3	3	3	2	Helicase	HerA,	central	domain
Rad51	PF08423.11	gi|289596227|ref|YP_003482923.1|	-	0.0065	15.8	0.3	0.011	15.0	0.3	1.3	1	0	0	1	1	1	1	Rad51
Zeta_toxin	PF06414.12	gi|289596227|ref|YP_003482923.1|	-	0.0095	15.2	0.0	0.021	14.1	0.0	1.5	1	0	0	1	1	1	1	Zeta	toxin
AAA_22	PF13401.6	gi|289596227|ref|YP_003482923.1|	-	0.01	16.1	0.1	0.021	15.1	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.17	gi|289596227|ref|YP_003482923.1|	-	0.014	15.1	0.0	0.025	14.3	0.0	1.3	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA_25	PF13481.6	gi|289596227|ref|YP_003482923.1|	-	0.021	14.4	0.1	0.11	12.0	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
ABC_tran	PF00005.27	gi|289596227|ref|YP_003482923.1|	-	0.023	15.2	0.1	0.13	12.8	0.0	2.0	2	0	0	2	2	2	0	ABC	transporter
MEDS	PF14417.6	gi|289596227|ref|YP_003482923.1|	-	0.024	14.5	0.0	0.048	13.5	0.0	1.5	1	0	0	1	1	1	0	MEDS:	MEthanogen/methylotroph,	DcmR	Sensory	domain
ATPase_2	PF01637.18	gi|289596227|ref|YP_003482923.1|	-	0.038	13.9	0.1	0.18	11.7	0.0	1.9	2	0	0	2	2	2	0	ATPase	domain	predominantly	from	Archaea
AAA_33	PF13671.6	gi|289596227|ref|YP_003482923.1|	-	0.043	14.0	0.0	0.074	13.2	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
TrwB_AAD_bind	PF10412.9	gi|289596227|ref|YP_003482923.1|	-	0.045	12.7	0.1	0.091	11.7	0.1	1.4	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
SRP54	PF00448.22	gi|289596227|ref|YP_003482923.1|	-	0.079	12.6	0.1	0.23	11.1	0.0	1.8	1	1	1	2	2	2	0	SRP54-type	protein,	GTPase	domain
RecA	PF00154.21	gi|289596227|ref|YP_003482923.1|	-	0.089	12.2	0.0	0.14	11.6	0.0	1.3	1	0	0	1	1	1	0	recA	bacterial	DNA	recombination	protein
S_100	PF01023.19	gi|289596227|ref|YP_003482923.1|	-	0.14	11.9	0.0	0.14	11.9	0.0	2.6	3	0	0	3	3	3	0	S-100/ICaBP	type	calcium	binding	domain
TsaE	PF02367.17	gi|289596227|ref|YP_003482923.1|	-	0.22	11.5	0.6	0.65	10.0	0.1	1.9	2	0	0	2	2	2	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_23	PF13476.6	gi|289596227|ref|YP_003482923.1|	-	0.49	10.9	5.9	1.5	9.3	5.8	2.1	1	1	0	1	1	1	0	AAA	domain
DDE_Tnp_1	PF01609.21	gi|289596228|ref|YP_003482924.1|	-	2e-22	79.9	1.4	2.5e-22	79.6	0.3	1.7	2	0	0	2	2	2	1	Transposase	DDE	domain
DDE_Tnp_1_6	PF13751.6	gi|289596228|ref|YP_003482924.1|	-	0.0029	17.8	0.1	0.0078	16.4	0.0	1.8	2	0	0	2	2	2	1	Transposase	DDE	domain
DUF772	PF05598.11	gi|289596228|ref|YP_003482924.1|	-	0.0067	16.4	0.5	0.015	15.3	0.5	1.5	1	0	0	1	1	1	1	Transposase	domain	(DUF772)
Phage_GPA	PF05840.13	gi|289596228|ref|YP_003482924.1|	-	0.074	12.1	0.2	0.12	11.5	0.2	1.3	1	0	0	1	1	1	0	Bacteriophage	replication	gene	A	protein	(GPA)
DUF2268	PF10026.9	gi|289596230|ref|YP_003482926.1|	-	0.00017	21.2	0.0	0.00033	20.3	0.0	1.5	1	0	0	1	1	1	1	Predicted	Zn-dependent	protease	(DUF2268)
Phage_TAC_8	PF10666.9	gi|289596230|ref|YP_003482926.1|	-	0.034	14.4	0.1	0.034	14.4	0.1	1.7	2	0	0	2	2	2	0	Phage	tail	assembly	chaperone	protein	Gp14	()A118
MauJ	PF17419.2	gi|289596230|ref|YP_003482926.1|	-	0.098	12.1	0.0	2.3	7.6	0.0	2.1	2	0	0	2	2	2	0	Methylamine	utilization	protein	MauJ
ATPase	PF06745.13	gi|289596231|ref|YP_003482927.1|	-	3.1e-08	33.3	0.3	3.8e-06	26.4	0.3	2.4	1	1	0	1	1	1	1	KaiC
Rad51	PF08423.11	gi|289596231|ref|YP_003482927.1|	-	0.0012	18.2	0.0	0.0084	15.4	0.0	2.2	2	1	1	3	3	3	1	Rad51
AAA_25	PF13481.6	gi|289596231|ref|YP_003482927.1|	-	0.0051	16.4	0.2	0.036	13.7	0.2	2.4	1	1	0	1	1	1	1	AAA	domain
DnaB_C	PF03796.15	gi|289596231|ref|YP_003482927.1|	-	0.015	14.7	0.1	0.058	12.7	0.0	1.8	2	0	0	2	2	2	0	DnaB-like	helicase	C	terminal	domain
TIP49	PF06068.13	gi|289596231|ref|YP_003482927.1|	-	0.036	13.3	0.0	0.057	12.6	0.0	1.4	1	0	0	1	1	1	0	TIP49	P-loop	domain
ATPase	PF06745.13	gi|289596232|ref|YP_003482928.1|	-	3.5e-61	206.5	0.3	3.9e-61	206.4	0.3	1.0	1	0	0	1	1	1	1	KaiC
GvpD	PF07088.11	gi|289596232|ref|YP_003482928.1|	-	4.4e-08	32.2	0.1	5.9e-08	31.8	0.1	1.2	1	0	0	1	1	1	1	GvpD	gas	vesicle	protein
RecA	PF00154.21	gi|289596232|ref|YP_003482928.1|	-	1.1e-06	28.3	0.0	1.9e-06	27.5	0.0	1.6	1	1	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
Rad51	PF08423.11	gi|289596232|ref|YP_003482928.1|	-	1.5e-06	27.7	0.2	2e-06	27.3	0.2	1.5	1	1	0	1	1	1	1	Rad51
AAA_25	PF13481.6	gi|289596232|ref|YP_003482928.1|	-	6.9e-06	25.8	0.0	1e-05	25.2	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
DnaB_C	PF03796.15	gi|289596232|ref|YP_003482928.1|	-	6.5e-05	22.4	0.4	0.00086	18.7	0.4	2.1	1	1	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
AAA_14	PF13173.6	gi|289596232|ref|YP_003482928.1|	-	0.00044	20.3	0.0	0.0018	18.3	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
PAXNEB	PF05625.11	gi|289596232|ref|YP_003482928.1|	-	0.00092	18.4	0.1	0.011	15.0	0.1	2.0	1	1	0	2	2	2	1	PAXNEB	protein
AAA_24	PF13479.6	gi|289596232|ref|YP_003482928.1|	-	0.0013	18.5	0.1	0.0026	17.5	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
MEDS	PF14417.6	gi|289596232|ref|YP_003482928.1|	-	0.0061	16.4	0.0	0.011	15.6	0.0	1.4	1	1	0	1	1	1	1	MEDS:	MEthanogen/methylotroph,	DcmR	Sensory	domain
ATP-synt_ab	PF00006.25	gi|289596232|ref|YP_003482928.1|	-	0.014	15.1	0.0	0.022	14.4	0.0	1.5	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_16	PF13191.6	gi|289596232|ref|YP_003482928.1|	-	0.058	13.8	0.0	0.11	12.9	0.0	1.3	1	1	0	1	1	1	0	AAA	ATPase	domain
ResIII	PF04851.15	gi|289596232|ref|YP_003482928.1|	-	0.069	13.1	0.1	0.098	12.7	0.1	1.4	1	1	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
ABC_tran	PF00005.27	gi|289596232|ref|YP_003482928.1|	-	0.082	13.4	0.2	0.19	12.2	0.2	1.5	1	1	0	1	1	1	0	ABC	transporter
IstB_IS21	PF01695.17	gi|289596232|ref|YP_003482928.1|	-	0.13	12.0	0.0	0.24	11.1	0.0	1.5	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
DUF1283	PF06932.11	gi|289596234|ref|YP_003482930.1|	-	0.0036	17.5	0.2	0.0058	16.8	0.2	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1283)
zf-C2H2_2	PF12756.7	gi|289596234|ref|YP_003482930.1|	-	0.016	15.5	0.5	1.7	9.0	0.0	2.2	1	1	1	2	2	2	0	C2H2	type	zinc-finger	(2	copies)
zf-AD	PF07776.15	gi|289596234|ref|YP_003482930.1|	-	0.019	15.2	0.4	0.034	14.4	0.4	1.6	1	1	0	1	1	1	0	Zinc-finger	associated	domain	(zf-AD)
DUF4428	PF14471.6	gi|289596234|ref|YP_003482930.1|	-	0.047	13.6	1.5	0.1	12.6	1.6	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4428)
Fis1_TPR_C	PF14853.6	gi|289596234|ref|YP_003482930.1|	-	0.047	13.8	0.6	0.086	12.9	0.6	1.4	1	0	0	1	1	1	0	Fis1	C-terminal	tetratricopeptide	repeat
zf-C4_ClpX	PF06689.13	gi|289596234|ref|YP_003482930.1|	-	0.21	11.5	3.1	0.45	10.4	3.1	1.6	1	1	0	1	1	1	0	ClpX	C4-type	zinc	finger
DUF5065	PF16723.5	gi|289596235|ref|YP_003482931.1|	-	0.052	13.6	0.8	0.19	11.8	0.2	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF5065)
Cnl2_NKP2	PF09447.10	gi|289596235|ref|YP_003482931.1|	-	0.26	11.5	1.6	4.5	7.5	0.3	2.5	2	0	0	2	2	2	0	Cnl2/NKP2	family	protein
Tex_N	PF09371.10	gi|289596235|ref|YP_003482931.1|	-	0.46	10.1	4.4	0.37	10.4	1.9	1.9	2	1	0	2	2	2	0	Tex-like	protein	N-terminal	domain
GyrB_insert	PF18053.1	gi|289596235|ref|YP_003482931.1|	-	0.62	9.9	3.3	6	6.7	0.7	2.3	2	1	0	2	2	2	0	DNA	gyrase	B	subunit	insert	domain
Yip1	PF04893.17	gi|289596236|ref|YP_003482932.1|	-	0.0098	15.6	11.8	0.014	15.1	11.8	1.2	1	0	0	1	1	1	1	Yip1	domain
GAPT	PF11770.8	gi|289596236|ref|YP_003482932.1|	-	0.61	9.9	4.7	8.8	6.2	1.1	2.3	2	0	0	2	2	2	0	GRB2-binding	adapter	(GAPT)
E1-E2_ATPase	PF00122.20	gi|289596236|ref|YP_003482932.1|	-	0.73	9.3	6.0	0.046	13.2	0.7	1.6	2	0	0	2	2	2	0	E1-E2	ATPase
DotU	PF09850.9	gi|289596236|ref|YP_003482932.1|	-	0.97	9.1	2.3	26	4.5	1.5	2.3	2	1	0	2	2	2	0	Type	VI	secretion	system	protein	DotU
CBP_BcsF	PF11120.8	gi|289596236|ref|YP_003482932.1|	-	7	6.8	6.2	9.2	6.5	1.0	2.4	2	0	0	2	2	2	0	Cellulose	biosynthesis	protein	BcsF
TctA	PF01970.16	gi|289596237|ref|YP_003482933.1|	-	7e-64	216.0	44.4	8e-64	215.8	44.4	1.0	1	0	0	1	1	1	1	Tripartite	tricarboxylate	transporter	TctA	family
PKD	PF00801.20	gi|289596238|ref|YP_003482934.1|	-	5.2e-11	42.2	15.0	0.00052	19.8	0.1	4.9	4	0	0	4	4	4	4	PKD	domain
CARDB	PF07705.11	gi|289596238|ref|YP_003482934.1|	-	9.9e-10	38.6	10.6	5.2e-09	36.3	1.3	4.2	3	1	0	3	3	3	1	CARDB
CarboxypepD_reg	PF13620.6	gi|289596238|ref|YP_003482934.1|	-	3.2e-09	37.0	6.2	9.9e-05	22.5	0.0	5.0	5	0	0	5	5	5	2	Carboxypeptidase	regulatory-like	domain
Big_3_3	PF13750.6	gi|289596238|ref|YP_003482934.1|	-	0.018	14.7	11.9	0.01	15.5	3.4	4.0	3	1	0	3	3	3	0	Bacterial	Ig-like	domain	(group	3)
DUF4500	PF14937.6	gi|289596238|ref|YP_003482934.1|	-	0.032	14.2	0.1	0.31	11.1	0.0	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4500)
SpaA	PF17802.1	gi|289596238|ref|YP_003482934.1|	-	0.038	14.3	1.2	0.29	11.5	0.0	3.3	2	0	0	2	2	2	0	Prealbumin-like	fold	domain
SdrD_B	PF17210.3	gi|289596238|ref|YP_003482934.1|	-	0.044	14.0	0.2	0.044	14.0	0.2	5.0	5	0	0	5	5	5	0	SdrD	B-like	domain
PKD_2	PF16407.5	gi|289596238|ref|YP_003482934.1|	-	0.19	11.9	19.0	1.3	9.2	0.0	5.3	4	2	1	5	5	5	0	PKD-like	family
tRNA-synt_1d	PF00750.19	gi|289596239|ref|YP_003482935.1|	-	4.5e-36	124.5	3.7	6.6e-36	124.0	3.7	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(R)
DALR_1	PF05746.15	gi|289596239|ref|YP_003482935.1|	-	2.1e-33	115.0	1.8	3.9e-33	114.2	0.2	2.3	2	0	0	2	2	2	1	DALR	anticodon	binding	domain
Arg_tRNA_synt_N	PF03485.16	gi|289596239|ref|YP_003482935.1|	-	4.1e-16	59.3	0.3	1e-14	54.9	0.2	3.1	3	0	0	3	3	3	1	Arginyl	tRNA	synthetase	N	terminal	domain
tRNA-synt_1f	PF01921.18	gi|289596239|ref|YP_003482935.1|	-	5e-07	29.0	0.1	0.01	14.8	0.0	2.6	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(K)
tRNA-synt_1e	PF01406.19	gi|289596239|ref|YP_003482935.1|	-	0.0021	17.4	0.2	0.029	13.7	0.0	2.6	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1g	PF09334.11	gi|289596239|ref|YP_003482935.1|	-	0.0036	16.1	0.2	3.7	6.2	0.0	3.4	3	0	0	3	3	3	1	tRNA	synthetases	class	I	(M)
tRNA-synt_1b	PF00579.25	gi|289596239|ref|YP_003482935.1|	-	0.007	15.7	0.0	0.12	11.7	0.0	2.3	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(W	and	Y)
tRNA-synt_1	PF00133.22	gi|289596239|ref|YP_003482935.1|	-	0.028	12.7	0.0	0.049	11.9	0.0	1.5	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(I,	L,	M	and	V)
SAM_KSR1	PF13543.6	gi|289596239|ref|YP_003482935.1|	-	0.26	11.4	1.8	0.53	10.4	0.1	2.3	2	0	0	2	2	2	0	SAM	like	domain	present	in	kinase	suppressor	RAS	1
SL4P	PF17618.2	gi|289596240|ref|YP_003482936.1|	-	0.068	13.2	0.0	0.12	12.4	0.0	1.5	1	0	0	1	1	1	0	Uncharacterized	Strongylid	L4	protein
Ribosomal_S27	PF01599.19	gi|289596241|ref|YP_003482937.1|	-	2.6e-21	75.5	3.8	2.9e-21	75.4	3.8	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S27a
DZR	PF12773.7	gi|289596241|ref|YP_003482937.1|	-	0.002	18.1	0.5	0.0027	17.7	0.5	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_2	PF13240.6	gi|289596241|ref|YP_003482937.1|	-	0.0037	16.9	4.3	0.12	12.1	0.2	2.4	2	0	0	2	2	2	2	zinc-ribbon	domain
Nudix_N_2	PF14803.6	gi|289596241|ref|YP_003482937.1|	-	0.005	16.7	7.0	0.034	14.0	6.7	2.1	1	1	0	1	1	1	1	Nudix	N-terminal
GFA	PF04828.14	gi|289596241|ref|YP_003482937.1|	-	0.007	16.7	1.5	0.075	13.4	0.0	2.0	1	1	1	2	2	2	1	Glutathione-dependent	formaldehyde-activating	enzyme
MqsA_antitoxin	PF15731.5	gi|289596241|ref|YP_003482937.1|	-	0.012	15.7	0.1	0.013	15.6	0.1	1.2	1	0	0	1	1	1	0	Antitoxin	component	of	bacterial	toxin-antitoxin	system,	MqsA
IBR	PF01485.21	gi|289596241|ref|YP_003482937.1|	-	0.012	15.8	0.3	0.013	15.7	0.3	1.1	1	0	0	1	1	1	0	IBR	domain,	a	half	RING-finger	domain
Ribosomal_L37e	PF01907.19	gi|289596241|ref|YP_003482937.1|	-	0.026	14.7	3.4	0.033	14.4	3.4	1.2	1	0	0	1	1	1	0	Ribosomal	protein	L37e
zf-NADH-PPase	PF09297.11	gi|289596241|ref|YP_003482937.1|	-	0.036	13.7	7.9	0.12	12.0	7.9	1.8	1	1	0	1	1	1	0	NADH	pyrophosphatase	zinc	ribbon	domain
A2L_zn_ribbon	PF08792.10	gi|289596241|ref|YP_003482937.1|	-	0.057	13.2	4.0	1.1	9.1	0.2	2.1	1	1	1	2	2	2	0	A2L	zinc	ribbon	domain
RNA_POL_M_15KD	PF02150.16	gi|289596241|ref|YP_003482937.1|	-	0.058	13.3	7.4	0.28	11.1	7.4	2.0	1	1	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
Zn_Tnp_IS1595	PF12760.7	gi|289596241|ref|YP_003482937.1|	-	0.059	13.4	5.5	0.11	12.5	4.9	1.8	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
HypA	PF01155.19	gi|289596241|ref|YP_003482937.1|	-	0.1	12.7	0.4	0.1	12.6	0.4	1.1	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
DUF1451	PF07295.11	gi|289596241|ref|YP_003482937.1|	-	0.11	12.6	1.0	0.11	12.6	1.0	1.1	1	0	0	1	1	1	0	Zinc-ribbon	containing	domain
Lar_restr_allev	PF14354.6	gi|289596241|ref|YP_003482937.1|	-	0.16	12.3	2.7	0.21	12.0	2.7	1.2	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
NOB1_Zn_bind	PF08772.11	gi|289596241|ref|YP_003482937.1|	-	0.17	12.1	6.0	0.39	10.9	0.9	2.1	1	1	1	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
zf_C2H2_10	PF18414.1	gi|289596241|ref|YP_003482937.1|	-	0.17	11.4	5.4	1.9	8.1	0.1	2.1	2	0	0	2	2	2	0	C2H2	type	zinc-finger
zf-ribbon_3	PF13248.6	gi|289596241|ref|YP_003482937.1|	-	0.24	10.9	5.2	0.9	9.0	0.5	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_13	PF09855.9	gi|289596241|ref|YP_003482937.1|	-	0.24	11.6	5.1	0.46	10.7	0.9	2.2	1	1	1	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
ADK_lid	PF05191.14	gi|289596241|ref|YP_003482937.1|	-	0.32	11.0	5.2	1.5	8.9	0.8	2.2	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
PknG_rubred	PF16919.5	gi|289596241|ref|YP_003482937.1|	-	0.44	10.7	3.2	0.63	10.2	3.2	1.3	1	1	0	1	1	1	0	Protein	kinase	G	rubredoxin	domain
Ribosomal_S24e	PF01282.19	gi|289596242|ref|YP_003482938.1|	-	2.1e-31	107.7	0.2	2.6e-31	107.4	0.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S24e
DUF359	PF04019.12	gi|289596243|ref|YP_003482939.1|	-	1.1e-38	131.7	0.4	1.5e-38	131.3	0.4	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF359)
LacI	PF00356.21	gi|289596243|ref|YP_003482939.1|	-	0.035	13.9	0.1	0.94	9.3	0.0	2.7	3	0	0	3	3	3	0	Bacterial	regulatory	proteins,	lacI	family
Sacchrp_dh_NADP	PF03435.18	gi|289596243|ref|YP_003482939.1|	-	0.12	12.6	0.0	0.22	11.8	0.0	1.3	1	0	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
NBD94	PF16830.5	gi|289596243|ref|YP_003482939.1|	-	0.16	12.4	6.1	1.1	9.7	0.6	3.1	3	0	0	3	3	3	0	Nucleotide-Binding	Domain	94	of	RH
Spt4	PF06093.13	gi|289596244|ref|YP_003482940.1|	-	7.5e-11	42.0	1.4	1.4e-10	41.1	1.4	1.4	1	1	0	1	1	1	1	Spt4/RpoE2	zinc	finger
Nop10p	PF04135.12	gi|289596244|ref|YP_003482940.1|	-	6.3e-05	22.9	1.4	9.8e-05	22.3	1.4	1.3	1	0	0	1	1	1	1	Nucleolar	RNA-binding	protein,	Nop10p	family
RecR	PF02132.15	gi|289596244|ref|YP_003482940.1|	-	8e-05	22.1	1.8	0.00011	21.7	1.8	1.2	1	0	0	1	1	1	1	RecR	protein
DUF1272	PF06906.11	gi|289596244|ref|YP_003482940.1|	-	0.0044	17.1	1.9	0.0064	16.5	1.9	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1272)
PolC_DP2	PF03833.13	gi|289596244|ref|YP_003482940.1|	-	0.017	13.1	0.2	0.017	13.1	0.2	1.0	1	0	0	1	1	1	0	DNA	polymerase	II	large	subunit	DP2
HypA	PF01155.19	gi|289596244|ref|YP_003482940.1|	-	0.039	14.0	0.6	0.047	13.7	0.6	1.1	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Zn-ribbon_8	PF09723.10	gi|289596244|ref|YP_003482940.1|	-	1	9.5	4.7	13	6.0	4.9	2.1	1	1	1	2	2	2	0	Zinc	ribbon	domain
GATA	PF00320.27	gi|289596244|ref|YP_003482940.1|	-	1.4	8.6	7.6	3.7	7.3	1.5	2.2	2	0	0	2	2	2	0	GATA	zinc	finger
SHS2_Rpb7-N	PF03876.17	gi|289596245|ref|YP_003482941.1|	-	3.7e-11	43.2	0.0	1.1e-10	41.7	0.0	1.8	1	1	0	1	1	1	1	SHS2	domain	found	in	N	terminus	of	Rpb7p/Rpc25p/MJ0397
S1	PF00575.23	gi|289596245|ref|YP_003482941.1|	-	2.7e-09	37.2	0.3	2.7e-09	37.2	0.3	1.8	2	0	0	2	2	2	1	S1	RNA	binding	domain
HAD_2	PF13419.6	gi|289596246|ref|YP_003482942.1|	-	2.7e-25	89.5	0.0	3.3e-25	89.2	0.0	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.26	gi|289596246|ref|YP_003482942.1|	-	7.1e-10	39.5	0.0	2.1e-07	31.4	0.0	2.2	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.6	gi|289596246|ref|YP_003482942.1|	-	2.1e-08	34.1	0.0	3.6e-08	33.4	0.0	1.3	1	0	0	1	1	1	1	HAD-hyrolase-like
HAD	PF12710.7	gi|289596246|ref|YP_003482942.1|	-	1.6e-06	28.6	0.2	2.6e-06	28.0	0.2	1.3	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Acid_phosphat_B	PF03767.14	gi|289596246|ref|YP_003482942.1|	-	2.3e-05	24.1	0.7	0.0044	16.6	0.7	2.2	1	1	0	1	1	1	1	HAD	superfamily,	subfamily	IIIB	(Acid	phosphatase)
Hydrolase_6	PF13344.6	gi|289596246|ref|YP_003482942.1|	-	8.4e-05	22.6	0.0	0.0003	20.9	0.0	2.0	2	1	0	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.12	gi|289596246|ref|YP_003482942.1|	-	0.0004	20.2	0.0	0.0051	16.6	0.0	2.3	2	0	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
ADH_zinc_N	PF00107.26	gi|289596246|ref|YP_003482942.1|	-	0.0044	17.0	0.0	1.7	8.6	0.0	2.2	2	0	0	2	2	2	2	Zinc-binding	dehydrogenase
PPR	PF01535.20	gi|289596246|ref|YP_003482942.1|	-	0.011	15.9	0.9	4.2	7.8	0.0	2.8	3	0	0	3	3	3	0	PPR	repeat
Radical_SAM	PF04055.21	gi|289596246|ref|YP_003482942.1|	-	0.013	15.9	0.2	0.025	14.9	0.2	1.4	1	1	0	1	1	1	0	Radical	SAM	superfamily
NIF	PF03031.18	gi|289596246|ref|YP_003482942.1|	-	0.073	12.8	0.1	1.8	8.3	0.0	2.3	2	1	0	2	2	2	0	NLI	interacting	factor-like	phosphatase
Acid_PPase	PF12689.7	gi|289596246|ref|YP_003482942.1|	-	0.08	12.8	0.1	4.7	7.0	0.1	2.2	2	1	0	2	2	2	0	Acid	Phosphatase
DUF269	PF03270.13	gi|289596246|ref|YP_003482942.1|	-	0.12	12.5	0.0	10	6.2	0.0	2.9	3	0	0	3	3	3	0	Protein	of	unknown	function,	DUF269
TGT	PF01702.18	gi|289596247|ref|YP_003482943.1|	-	3.1e-69	233.8	0.0	4.3e-69	233.3	0.0	1.1	1	0	0	1	1	1	1	Queuine	tRNA-ribosyltransferase
TGT_C2	PF14810.6	gi|289596247|ref|YP_003482943.1|	-	9e-27	93.0	0.1	1.7e-26	92.1	0.1	1.5	1	0	0	1	1	1	1	Patch-forming	domain	C2	of	tRNA-guanine	transglycosylase
PUA	PF01472.20	gi|289596247|ref|YP_003482943.1|	-	1e-17	63.8	0.1	3.3e-17	62.2	0.1	1.9	1	0	0	1	1	1	1	PUA	domain
TGT_C1	PF14809.6	gi|289596247|ref|YP_003482943.1|	-	0.0016	18.7	0.7	0.088	13.1	0.3	3.3	2	1	0	2	2	2	1	C1	domain	of	tRNA-guanine	transglycosylase	dimerisation
DUF5591	PF17884.1	gi|289596247|ref|YP_003482943.1|	-	0.0068	16.3	0.0	0.014	15.2	0.0	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF5591)
UPF0113	PF03657.13	gi|289596247|ref|YP_003482943.1|	-	0.015	15.5	0.1	0.04	14.2	0.1	1.7	1	0	0	1	1	1	0	UPF0113	PUA	domain
Ras	PF00071.22	gi|289596248|ref|YP_003482944.1|	-	4.3e-20	71.9	0.1	5.1e-20	71.7	0.1	1.1	1	0	0	1	1	1	1	Ras	family
Roc	PF08477.13	gi|289596248|ref|YP_003482944.1|	-	5.1e-12	46.1	0.0	9.1e-12	45.3	0.0	1.4	1	0	0	1	1	1	1	Ras	of	Complex,	Roc,	domain	of	DAPkinase
Arf	PF00025.21	gi|289596248|ref|YP_003482944.1|	-	0.0011	18.4	0.0	0.0015	18.0	0.0	1.3	1	0	0	1	1	1	1	ADP-ribosylation	factor	family
GTP_EFTU	PF00009.27	gi|289596248|ref|YP_003482944.1|	-	0.033	13.7	0.0	6.8	6.2	0.0	2.3	1	1	0	2	2	2	0	Elongation	factor	Tu	GTP	binding	domain
MMR_HSR1	PF01926.23	gi|289596248|ref|YP_003482944.1|	-	0.035	14.2	0.0	0.093	12.8	0.0	1.7	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
TniB	PF05621.11	gi|289596248|ref|YP_003482944.1|	-	0.077	12.4	0.0	0.13	11.7	0.0	1.4	1	0	0	1	1	1	0	Bacterial	TniB	protein
Phage_min_tail	PF05939.13	gi|289596248|ref|YP_003482944.1|	-	0.084	13.3	0.0	0.31	11.4	0.0	1.8	2	0	0	2	2	2	0	Phage	minor	tail	protein
DUF592	PF04574.13	gi|289596248|ref|YP_003482944.1|	-	0.14	12.0	0.0	0.33	10.7	0.0	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF592)
tRNA_int_endo	PF01974.17	gi|289596249|ref|YP_003482945.1|	-	9e-29	99.4	4.6	5.3e-24	84.1	0.7	2.9	3	0	0	3	3	3	2	tRNA	intron	endonuclease,	catalytic	C-terminal	domain
tRNA_int_endo_N	PF02778.14	gi|289596249|ref|YP_003482945.1|	-	1.7e-09	37.2	0.3	8.8e-06	25.3	0.0	2.7	2	0	0	2	2	2	2	tRNA	intron	endonuclease,	N-terminal	domain
YozD	PF14162.6	gi|289596249|ref|YP_003482945.1|	-	0.083	13.2	0.2	1.9	8.8	0.0	2.7	2	0	0	2	2	2	0	YozD-like	protein
Glyco_trans_1_2	PF13524.6	gi|289596249|ref|YP_003482945.1|	-	0.086	13.2	0.0	0.41	11.1	0.0	2.0	2	0	0	2	2	2	0	Glycosyl	transferases	group	1
tRNA_anti-codon	PF01336.25	gi|289596250|ref|YP_003482946.1|	-	4.1e-15	55.5	13.1	0.00032	20.6	0.0	9.0	9	0	0	9	9	9	4	OB-fold	nucleic	acid	binding	domain
PKD	PF00801.20	gi|289596250|ref|YP_003482946.1|	-	6.3e-14	51.6	0.4	2.4e-13	49.7	0.4	2.1	1	0	0	1	1	1	1	PKD	domain
tRNA_anti_2	PF13742.6	gi|289596250|ref|YP_003482946.1|	-	0.0067	16.6	10.1	0.32	11.2	0.2	6.0	7	1	0	7	7	7	1	OB-fold	nucleic	acid	binding	domain
RMI2	PF16100.5	gi|289596250|ref|YP_003482946.1|	-	0.011	15.5	0.1	0.21	11.4	0.0	2.7	2	0	0	2	2	2	0	RecQ-mediated	genome	instability	protein	2
BOF	PF04076.13	gi|289596250|ref|YP_003482946.1|	-	0.013	15.6	0.4	7.5	6.7	0.0	4.0	4	0	0	4	4	4	0	Bacterial	OB	fold	(BOF)	protein
GIDE	PF12483.8	gi|289596250|ref|YP_003482946.1|	-	0.094	12.1	0.0	2.5	7.5	0.0	3.3	4	1	1	5	5	5	0	E3	Ubiquitin	ligase
P_proprotein	PF01483.20	gi|289596250|ref|YP_003482946.1|	-	0.3	11.1	4.3	12	6.0	0.0	4.6	5	0	0	5	5	5	0	Proprotein	convertase	P-domain
tRNA_anti-codon	PF01336.25	gi|289596251|ref|YP_003482947.1|	-	5.9e-06	26.2	0.0	0.0014	18.6	0.0	2.2	2	0	0	2	2	2	1	OB-fold	nucleic	acid	binding	domain
RMI1_C	PF16099.5	gi|289596251|ref|YP_003482947.1|	-	6e-05	22.9	0.0	0.027	14.3	0.0	2.2	2	0	0	2	2	2	2	Recq-mediated	genome	instability	protein	1,	C-terminal	OB-fold
zinc_ribbon_2	PF13240.6	gi|289596251|ref|YP_003482947.1|	-	0.00087	18.9	4.1	0.46	10.3	0.4	2.3	2	0	0	2	2	2	2	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|289596251|ref|YP_003482947.1|	-	0.001	18.4	5.2	0.0024	17.2	5.2	1.6	1	1	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|289596251|ref|YP_003482947.1|	-	0.0028	17.6	0.6	0.0046	17.0	0.6	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
RMI2	PF16100.5	gi|289596251|ref|YP_003482947.1|	-	0.0051	16.6	0.5	0.14	12.0	0.1	2.3	1	1	1	2	2	2	1	RecQ-mediated	genome	instability	protein	2
zf-LITAF-like	PF10601.9	gi|289596251|ref|YP_003482947.1|	-	0.0073	16.6	0.9	2.8	8.3	0.2	2.3	1	1	1	2	2	2	2	LITAF-like	zinc	ribbon	domain
POT1PC	PF16686.5	gi|289596251|ref|YP_003482947.1|	-	0.074	12.9	0.1	0.33	10.8	0.0	2.0	2	0	0	2	2	2	0	ssDNA-binding	domain	of	telomere	protection	protein
Sgf11	PF08209.11	gi|289596251|ref|YP_003482947.1|	-	0.1	12.2	1.3	0.59	9.8	0.1	2.1	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
LSM	PF01423.22	gi|289596251|ref|YP_003482947.1|	-	0.12	12.1	0.0	0.27	10.9	0.0	1.7	1	0	0	1	1	1	0	LSM	domain
DUF35_N	PF12172.8	gi|289596251|ref|YP_003482947.1|	-	0.12	12.2	2.5	0.21	11.5	2.5	1.3	1	0	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-RING_7	PF02591.15	gi|289596251|ref|YP_003482947.1|	-	0.59	10.4	5.6	1.7	8.9	0.9	2.6	2	0	0	2	2	2	0	C4-type	zinc	ribbon	domain
NRDD	PF13597.6	gi|289596251|ref|YP_003482947.1|	-	0.87	8.3	3.5	1.3	7.8	3.5	1.2	1	0	0	1	1	1	0	Anaerobic	ribonucleoside-triphosphate	reductase
TF_Zn_Ribbon	PF08271.12	gi|289596251|ref|YP_003482947.1|	-	3.6	7.2	6.9	43	3.7	6.9	2.4	1	1	0	1	1	1	0	TFIIB	zinc-binding
UPF0547	PF10571.9	gi|289596251|ref|YP_003482947.1|	-	4.2	7.6	5.5	23	5.2	5.5	2.0	1	1	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
tRNA_anti-codon	PF01336.25	gi|289596252|ref|YP_003482948.1|	-	2.4e-07	30.6	4.4	0.14	12.1	0.0	4.6	4	3	1	5	5	5	3	OB-fold	nucleic	acid	binding	domain
zinc_ribbon_2	PF13240.6	gi|289596252|ref|YP_003482948.1|	-	2.1e-06	27.2	1.2	3.5e-06	26.5	1.2	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|289596252|ref|YP_003482948.1|	-	0.00017	21.5	0.5	0.00028	20.9	0.5	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
UPF0547	PF10571.9	gi|289596252|ref|YP_003482948.1|	-	0.0018	18.3	2.5	0.0033	17.5	2.5	1.3	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
zf-ribbon_3	PF13248.6	gi|289596252|ref|YP_003482948.1|	-	0.009	15.4	5.5	0.017	14.5	5.5	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
zinc_ribbon_15	PF17032.5	gi|289596252|ref|YP_003482948.1|	-	0.49	11.2	1.9	1	10.2	1.9	1.6	1	0	0	1	1	1	0	zinc-ribbon	family
Prok-RING_1	PF14446.6	gi|289596252|ref|YP_003482948.1|	-	0.87	9.6	2.5	1.4	8.9	2.5	1.3	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
TctA	PF01970.16	gi|289596253|ref|YP_003482949.1|	-	7.3e-54	183.0	41.4	8.7e-54	182.8	41.4	1.0	1	0	0	1	1	1	1	Tripartite	tricarboxylate	transporter	TctA	family
YdjM	PF04307.14	gi|289596254|ref|YP_003482950.1|	-	2.3e-13	49.8	0.0	7e-13	48.3	0.0	1.7	1	1	0	1	1	1	1	LexA-binding,	inner	membrane-associated	putative	hydrolase
Amidase_3	PF01520.18	gi|289596254|ref|YP_003482950.1|	-	0.16	12.1	0.0	0.23	11.6	0.0	1.2	1	0	0	1	1	1	0	N-acetylmuramoyl-L-alanine	amidase
FAD_binding_3	PF01494.19	gi|289596255|ref|YP_003482951.1|	-	5.8e-21	75.1	0.0	1.7e-20	73.6	0.0	1.7	1	1	0	1	1	1	1	FAD	binding	domain
FAD_oxidored	PF12831.7	gi|289596255|ref|YP_003482951.1|	-	1.6e-13	50.8	1.0	8e-13	48.5	0.6	2.1	2	1	0	2	2	2	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.24	gi|289596255|ref|YP_003482951.1|	-	4.7e-13	49.0	0.5	9e-08	31.6	0.1	2.3	1	1	1	2	2	2	2	FAD	binding	domain
Trp_halogenase	PF04820.14	gi|289596255|ref|YP_003482951.1|	-	4.3e-10	39.0	0.1	1.2e-05	24.4	0.0	2.1	1	1	1	2	2	2	2	Tryptophan	halogenase
DAO	PF01266.24	gi|289596255|ref|YP_003482951.1|	-	2.6e-09	37.2	1.7	8.9e-06	25.5	0.3	2.3	1	1	1	2	2	2	2	FAD	dependent	oxidoreductase
Lycopene_cycl	PF05834.12	gi|289596255|ref|YP_003482951.1|	-	4.8e-09	35.8	0.0	1.4e-06	27.6	0.1	2.1	2	0	0	2	2	2	2	Lycopene	cyclase	protein
Pyr_redox_2	PF07992.14	gi|289596255|ref|YP_003482951.1|	-	3.2e-08	33.2	0.0	5.7e-08	32.3	0.0	1.4	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.6	gi|289596255|ref|YP_003482951.1|	-	7.8e-08	32.4	0.1	2.1e-07	31.1	0.1	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.14	gi|289596255|ref|YP_003482951.1|	-	2.3e-07	29.9	0.9	5.7e-07	28.6	0.1	1.9	2	0	0	2	2	2	1	HI0933-like	protein
GIDA	PF01134.22	gi|289596255|ref|YP_003482951.1|	-	1.2e-06	27.9	0.0	3.2e-06	26.5	0.0	1.7	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
Thi4	PF01946.17	gi|289596255|ref|YP_003482951.1|	-	1e-05	24.9	0.0	3e-05	23.4	0.0	1.8	2	0	0	2	2	2	1	Thi4	family
Pyr_redox	PF00070.27	gi|289596255|ref|YP_003482951.1|	-	9e-05	23.0	0.0	0.0013	19.3	0.0	2.5	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
3HCDH_N	PF02737.18	gi|289596255|ref|YP_003482951.1|	-	0.0042	17.0	0.2	0.17	11.8	0.0	2.6	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
AlaDh_PNT_C	PF01262.21	gi|289596255|ref|YP_003482951.1|	-	0.019	14.3	0.0	0.036	13.3	0.0	1.5	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
Myosin_N	PF02736.19	gi|289596255|ref|YP_003482951.1|	-	0.054	13.3	3.0	0.21	11.5	0.2	3.0	3	0	0	3	3	3	0	Myosin	N-terminal	SH3-like	domain
SE	PF08491.10	gi|289596255|ref|YP_003482951.1|	-	0.057	12.5	0.3	0.19	10.7	0.0	2.0	2	1	0	2	2	2	0	Squalene	epoxidase
Pyr_redox_3	PF13738.6	gi|289596255|ref|YP_003482951.1|	-	0.082	12.1	2.9	0.056	12.7	0.4	2.1	2	1	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
MSP	PF01716.18	gi|289596255|ref|YP_003482951.1|	-	0.13	11.4	0.0	0.24	10.6	0.0	1.3	1	0	0	1	1	1	0	Manganese-stabilising	protein	/	photosystem	II	polypeptide
Fer4	PF00037.27	gi|289596256|ref|YP_003482952.1|	-	2e-16	59.0	20.3	7.3e-11	41.4	4.6	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|289596256|ref|YP_003482952.1|	-	8.1e-13	48.7	40.2	3.5e-08	33.9	15.1	1.7	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|289596256|ref|YP_003482952.1|	-	1.3e-10	40.9	20.7	5.2e-09	35.8	5.2	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|289596256|ref|YP_003482952.1|	-	8.5e-10	38.6	11.4	3.5e-06	27.0	0.8	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|289596256|ref|YP_003482952.1|	-	2e-09	37.0	15.2	8.2e-06	25.6	2.4	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|289596256|ref|YP_003482952.1|	-	2.4e-08	34.8	10.1	9.1e-05	23.3	1.1	2.1	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_9	PF13187.6	gi|289596256|ref|YP_003482952.1|	-	1.4e-06	28.4	13.7	3.2e-06	27.2	13.8	1.5	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|289596256|ref|YP_003482952.1|	-	1.4e-06	28.3	16.4	1.7e-05	24.8	2.8	1.9	1	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|289596256|ref|YP_003482952.1|	-	6.1e-06	26.6	10.3	0.0012	19.2	0.5	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|289596256|ref|YP_003482952.1|	-	2.7e-05	24.3	18.0	0.00084	19.7	3.7	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|289596256|ref|YP_003482952.1|	-	0.00016	22.1	10.9	0.013	16.0	1.0	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|289596256|ref|YP_003482952.1|	-	0.0015	19.4	23.3	0.013	16.4	4.6	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|289596256|ref|YP_003482952.1|	-	0.0063	17.0	2.4	0.0063	17.0	2.4	2.5	2	1	0	2	2	2	1	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_15	PF13459.6	gi|289596256|ref|YP_003482952.1|	-	0.016	16.0	17.9	0.18	12.6	5.7	3.2	2	2	1	3	3	3	0	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.6	gi|289596256|ref|YP_003482952.1|	-	0.19	11.9	13.3	1.5	9.0	13.3	1.9	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
zf-CHCC	PF10276.9	gi|289596256|ref|YP_003482952.1|	-	0.29	11.2	7.9	1.1	9.3	0.8	2.5	2	1	0	2	2	2	0	Zinc-finger	domain
Fer4_22	PF17179.4	gi|289596256|ref|YP_003482952.1|	-	0.69	10.8	14.7	0.62	11.0	3.9	2.1	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Radical_SAM	PF04055.21	gi|289596257|ref|YP_003482953.1|	-	5.2e-17	62.7	0.0	9.5e-17	61.9	0.0	1.4	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|289596257|ref|YP_003482953.1|	-	4.7e-06	26.7	0.0	1.1e-05	25.5	0.0	1.6	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.6	gi|289596257|ref|YP_003482953.1|	-	9.1e-06	26.0	0.0	2.2e-05	24.8	0.0	1.6	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Glyco_hydro_49	PF03718.13	gi|289596259|ref|YP_003482955.1|	-	0.035	14.1	0.1	0.035	14.1	0.1	2.7	2	1	0	2	2	2	0	Glycosyl	hydrolase	family	49
HTH_24	PF13412.6	gi|289596260|ref|YP_003482956.1|	-	1.3e-18	66.3	1.0	7.5e-09	35.0	0.1	3.1	2	1	1	3	3	3	2	Winged	helix-turn-helix	DNA-binding
HTH_5	PF01022.20	gi|289596260|ref|YP_003482956.1|	-	3.9e-11	42.6	0.1	1.1e-06	28.3	0.0	2.5	2	1	0	2	2	2	2	Bacterial	regulatory	protein,	arsR	family
TrmB	PF01978.19	gi|289596260|ref|YP_003482956.1|	-	9.8e-08	31.8	0.6	0.00071	19.4	0.3	2.2	2	0	0	2	2	2	2	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.7	gi|289596260|ref|YP_003482956.1|	-	2.3e-07	30.6	0.0	0.00046	20.0	0.0	2.2	2	0	0	2	2	2	2	MarR	family
MarR	PF01047.22	gi|289596260|ref|YP_003482956.1|	-	2e-06	27.6	0.0	0.00023	21.0	0.0	2.3	2	0	0	2	2	2	1	MarR	family
HTH_20	PF12840.7	gi|289596260|ref|YP_003482956.1|	-	8.1e-06	25.8	0.0	0.057	13.5	0.0	2.4	2	1	0	2	2	2	2	Helix-turn-helix	domain
HTH_45	PF14947.6	gi|289596260|ref|YP_003482956.1|	-	6e-05	23.0	2.0	0.0022	17.9	0.5	2.9	2	1	0	2	2	2	1	Winged	helix-turn-helix
RP-C	PF03428.13	gi|289596260|ref|YP_003482956.1|	-	0.00011	21.9	0.0	0.079	12.6	0.0	2.1	2	0	0	2	2	2	2	Replication	protein	C	N-terminal	domain
HTH_IclR	PF09339.10	gi|289596260|ref|YP_003482956.1|	-	0.00025	20.8	0.0	0.0069	16.2	0.0	2.2	2	0	0	2	2	2	1	IclR	helix-turn-helix	domain
Penicillinase_R	PF03965.16	gi|289596260|ref|YP_003482956.1|	-	0.0003	21.1	0.2	0.0014	18.9	0.1	2.1	1	1	1	2	2	2	1	Penicillinase	repressor
Fe_dep_repress	PF01325.19	gi|289596260|ref|YP_003482956.1|	-	0.00041	20.5	0.0	0.00078	19.6	0.0	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_27	PF13463.6	gi|289596260|ref|YP_003482956.1|	-	0.00072	20.0	0.0	0.0074	16.8	0.0	2.1	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_Crp_2	PF13545.6	gi|289596260|ref|YP_003482956.1|	-	0.0013	18.7	0.0	0.0039	17.1	0.0	1.8	2	1	0	2	2	1	1	Crp-like	helix-turn-helix	domain
HTH_34	PF13601.6	gi|289596260|ref|YP_003482956.1|	-	0.0015	18.7	0.1	2	8.6	0.1	2.2	2	0	0	2	2	2	2	Winged	helix	DNA-binding	domain
FeoC	PF09012.10	gi|289596260|ref|YP_003482956.1|	-	0.0025	17.8	0.0	2.6	8.2	0.0	2.2	2	0	0	2	2	2	2	FeoC	like	transcriptional	regulator
PCI	PF01399.27	gi|289596260|ref|YP_003482956.1|	-	0.0043	17.5	0.3	2	9.0	0.0	2.2	1	1	1	2	2	2	1	PCI	domain
DUF4423	PF14394.6	gi|289596260|ref|YP_003482956.1|	-	0.0057	16.4	0.0	1.6	8.4	0.0	2.1	1	1	0	2	2	2	1	Domain	of	unknown	function	(DUF4423)
Phage_rep_O	PF04492.13	gi|289596260|ref|YP_003482956.1|	-	0.0072	16.9	0.1	0.054	14.1	0.0	2.1	1	1	1	2	2	2	1	Bacteriophage	replication	protein	O
RPA_C	PF08784.11	gi|289596260|ref|YP_003482956.1|	-	0.012	16.2	0.0	0.56	10.9	0.0	2.2	1	1	1	2	2	2	0	Replication	protein	A	C	terminal
YwpF	PF14183.6	gi|289596260|ref|YP_003482956.1|	-	0.016	15.2	0.0	0.032	14.2	0.0	1.7	1	1	1	2	2	2	0	YwpF-like	protein
Rrf2	PF02082.20	gi|289596260|ref|YP_003482956.1|	-	0.021	15.2	0.0	0.32	11.4	0.0	2.2	2	0	0	2	2	2	0	Transcriptional	regulator
E3_UFM1_ligase	PF09743.9	gi|289596260|ref|YP_003482956.1|	-	0.022	14.4	0.1	0.027	14.1	0.1	1.1	1	0	0	1	1	1	0	E3	UFM1-protein	ligase	1
HTH_11	PF08279.12	gi|289596260|ref|YP_003482956.1|	-	0.036	14.0	0.3	0.12	12.3	0.0	2.1	2	1	1	3	3	3	0	HTH	domain
HTH_DeoR	PF08220.12	gi|289596260|ref|YP_003482956.1|	-	0.044	13.5	0.0	0.085	12.6	0.0	1.5	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
HTH_36	PF13730.6	gi|289596260|ref|YP_003482956.1|	-	0.068	13.1	0.1	0.18	11.8	0.0	1.7	2	0	0	2	2	1	0	Helix-turn-helix	domain
HTH_40	PF14493.6	gi|289596260|ref|YP_003482956.1|	-	0.076	13.5	0.0	0.64	10.5	0.0	2.1	1	1	1	2	2	2	0	Helix-turn-helix	domain
HTH_23	PF13384.6	gi|289596260|ref|YP_003482956.1|	-	0.091	12.6	0.0	0.2	11.5	0.0	1.6	1	0	0	1	1	1	0	Homeodomain-like	domain
SelB-wing_2	PF09106.11	gi|289596260|ref|YP_003482956.1|	-	0.1	12.8	0.0	16	5.8	0.0	2.4	2	0	0	2	2	2	0	Elongation	factor	SelB,	winged	helix
FaeA	PF04703.12	gi|289596260|ref|YP_003482956.1|	-	0.1	13.0	0.0	0.18	12.2	0.0	1.3	1	0	0	1	1	1	0	FaeA-like	protein
Chal_sti_synt_C	PF02797.15	gi|289596260|ref|YP_003482956.1|	-	0.13	12.3	0.4	2.6	8.0	0.1	2.1	1	1	1	2	2	2	0	Chalcone	and	stilbene	synthases,	C-terminal	domain
Ost4	PF10215.9	gi|289596261|ref|YP_003482957.1|	-	0.0015	18.3	1.1	0.0015	18.3	1.1	2.5	2	1	0	2	2	2	1	Oligosaccaryltransferase
DUF4006	PF13179.6	gi|289596261|ref|YP_003482957.1|	-	0.021	14.8	1.8	0.021	14.8	1.8	2.1	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF4006)
DUF4118	PF13493.6	gi|289596261|ref|YP_003482957.1|	-	0.095	12.5	12.7	0.11	12.3	12.7	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4118)
PAP2	PF01569.21	gi|289596261|ref|YP_003482957.1|	-	7.4	6.3	8.6	1	9.2	1.2	2.2	1	1	0	2	2	2	0	PAP2	superfamily
Aminotran_1_2	PF00155.21	gi|289596262|ref|YP_003482958.1|	-	4.6e-71	239.9	0.0	5.2e-71	239.7	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.19	gi|289596262|ref|YP_003482958.1|	-	1.1e-05	24.5	0.0	0.0028	16.7	0.0	2.1	2	0	0	2	2	2	2	Aminotransferase	class-V
DegT_DnrJ_EryC1	PF01041.17	gi|289596262|ref|YP_003482958.1|	-	0.00045	19.6	0.0	0.0007	19.0	0.0	1.3	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Cys_Met_Meta_PP	PF01053.20	gi|289596262|ref|YP_003482958.1|	-	0.00084	18.0	0.0	0.0013	17.4	0.0	1.2	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
ACT	PF01842.25	gi|289596262|ref|YP_003482958.1|	-	0.046	13.5	0.0	3.7	7.4	0.0	2.6	2	0	0	2	2	2	0	ACT	domain
zf-ribbon_3	PF13248.6	gi|289596263|ref|YP_003482959.1|	-	5.6e-15	54.2	11.4	3e-07	29.6	1.7	2.3	2	0	0	2	2	2	2	zinc-ribbon	domain
zinc_ribbon_2	PF13240.6	gi|289596263|ref|YP_003482959.1|	-	5.5e-14	51.3	14.7	6.8e-08	32.0	4.9	2.7	2	0	0	2	2	2	2	zinc-ribbon	domain
DZR	PF12773.7	gi|289596263|ref|YP_003482959.1|	-	8.8e-11	41.7	10.6	1.4e-10	41.0	10.6	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_15	PF17032.5	gi|289596263|ref|YP_003482959.1|	-	1.1e-08	35.7	8.6	0.00013	22.6	0.5	2.5	2	0	0	2	2	2	2	zinc-ribbon	family
zinc-ribbon_6	PF10005.9	gi|289596263|ref|YP_003482959.1|	-	0.00028	21.5	7.1	0.18	12.5	1.4	2.5	1	1	1	2	2	2	2	zinc-ribbon	domain
Nudix_N_2	PF14803.6	gi|289596263|ref|YP_003482959.1|	-	0.0037	17.2	13.7	2.5	8.1	0.1	4.4	4	0	0	4	4	4	1	Nudix	N-terminal
Clathrin_H_link	PF13838.6	gi|289596263|ref|YP_003482959.1|	-	0.0088	15.9	0.3	0.11	12.4	0.0	2.2	2	0	0	2	2	2	1	Clathrin-H-link
UPF0547	PF10571.9	gi|289596263|ref|YP_003482959.1|	-	0.013	15.6	2.0	0.013	15.6	2.0	2.5	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
DNA_RNApol_7kD	PF03604.13	gi|289596263|ref|YP_003482959.1|	-	0.016	14.9	13.0	0.14	11.8	4.9	3.3	2	1	1	3	3	3	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zinc-ribbons_6	PF07191.12	gi|289596263|ref|YP_003482959.1|	-	0.023	14.7	8.0	0.11	12.5	8.0	2.1	1	1	0	1	1	1	0	zinc-ribbons
HemY_N	PF07219.13	gi|289596263|ref|YP_003482959.1|	-	0.028	14.6	0.3	6.3	7.0	0.0	2.4	2	0	0	2	2	2	0	HemY	protein	N-terminus
TF_Zn_Ribbon	PF08271.12	gi|289596263|ref|YP_003482959.1|	-	0.034	13.6	15.2	0.24	10.9	0.4	3.4	2	2	1	3	3	3	0	TFIIB	zinc-binding
MaAIMP_sms	PF16951.5	gi|289596263|ref|YP_003482959.1|	-	0.045	13.5	0.0	0.076	12.8	0.0	1.3	1	0	0	1	1	1	0	Putative	methionine	and	alanine	importer,	small	subunit
PolC_DP2	PF03833.13	gi|289596263|ref|YP_003482959.1|	-	0.054	11.4	12.1	0.14	10.0	12.1	1.8	1	1	0	1	1	1	0	DNA	polymerase	II	large	subunit	DP2
DUF35_N	PF12172.8	gi|289596263|ref|YP_003482959.1|	-	0.059	13.3	1.5	0.059	13.3	1.5	2.8	2	1	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF357	PF04010.13	gi|289596263|ref|YP_003482959.1|	-	0.1	12.7	1.7	0.16	12.1	0.1	2.1	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF357)
TPR_2	PF07719.17	gi|289596263|ref|YP_003482959.1|	-	0.2	11.9	1.6	0.24	11.6	0.2	1.9	2	0	0	2	2	1	0	Tetratricopeptide	repeat
Cript	PF10235.9	gi|289596263|ref|YP_003482959.1|	-	0.3	11.7	12.2	0.32	11.6	2.5	2.9	2	1	1	3	3	2	0	Microtubule-associated	protein	CRIPT
Zn-ribbon_8	PF09723.10	gi|289596263|ref|YP_003482959.1|	-	0.5	10.5	15.2	3.1	8.0	4.2	3.7	1	1	2	3	3	3	0	Zinc	ribbon	domain
Cytochrom_c3_2	PF14537.6	gi|289596263|ref|YP_003482959.1|	-	0.63	10.5	5.6	2.6	8.6	0.5	2.4	2	0	0	2	2	2	0	Cytochrome	c3
zf_Rg	PF17915.1	gi|289596263|ref|YP_003482959.1|	-	0.99	8.9	13.0	0.39	10.1	2.6	3.5	2	1	2	4	4	4	0	Reverse	gyrase	zinc	finger
PHF5	PF03660.14	gi|289596263|ref|YP_003482959.1|	-	1.1	9.5	6.4	2.2	8.5	6.4	1.4	1	0	0	1	1	1	0	PHF5-like	protein
OrfB_Zn_ribbon	PF07282.11	gi|289596263|ref|YP_003482959.1|	-	1.3	9.0	12.5	6.7	6.7	0.2	3.0	1	1	2	3	3	3	0	Putative	transposase	DNA-binding	domain
DNA_ligase_ZBD	PF03119.16	gi|289596263|ref|YP_003482959.1|	-	2.4	8.3	11.8	9.1	6.4	0.6	3.0	2	1	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
DUF2321	PF10083.9	gi|289596263|ref|YP_003482959.1|	-	3.1	7.4	10.4	85	2.7	10.4	3.0	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2321)
Ribosomal_L32p	PF01783.23	gi|289596263|ref|YP_003482959.1|	-	3.3	8.0	8.5	10	6.4	1.3	2.6	1	1	1	2	2	2	0	Ribosomal	L32p	protein	family
zf-AN1	PF01428.16	gi|289596263|ref|YP_003482959.1|	-	3.5	7.9	6.8	8.6	6.6	3.4	2.6	2	1	0	2	2	2	0	AN1-like	Zinc	finger
zf-tcix	PF14952.6	gi|289596263|ref|YP_003482959.1|	-	4.3	7.0	13.7	0.26	10.9	2.0	3.0	3	0	0	3	3	3	0	Putative	treble-clef,	zinc-finger,	Zn-binding
DUF2116	PF09889.9	gi|289596263|ref|YP_003482959.1|	-	4.7	7.3	14.7	1.1	9.2	0.8	3.3	3	0	0	3	3	3	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
CpXC	PF14353.6	gi|289596263|ref|YP_003482959.1|	-	5.6	7.0	7.8	2.3e+02	1.8	7.8	3.2	1	1	0	1	1	1	0	CpXC	protein
Auto_anti-p27	PF06677.12	gi|289596263|ref|YP_003482959.1|	-	6.5	7.0	11.5	1.2	9.4	1.4	3.0	2	1	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
DHHC	PF01529.20	gi|289596263|ref|YP_003482959.1|	-	7.5	6.7	11.2	9.4	6.3	0.5	3.1	3	0	0	3	3	3	0	DHHC	palmitoyltransferase
HscB_4_cys	PF18256.1	gi|289596263|ref|YP_003482959.1|	-	7.8	6.4	12.9	2.1	8.2	0.9	3.7	3	1	1	4	4	4	0	Co-chaperone	HscB	tetracysteine	metal	binding	motif
A2L_zn_ribbon	PF08792.10	gi|289596263|ref|YP_003482959.1|	-	8.6	6.2	12.8	14	5.5	0.1	3.5	3	1	0	3	3	3	0	A2L	zinc	ribbon	domain
zf-HIT	PF04438.16	gi|289596263|ref|YP_003482959.1|	-	9	6.3	14.8	3.8	7.5	8.7	2.6	1	1	2	3	3	3	0	HIT	zinc	finger
DUF1272	PF06906.11	gi|289596263|ref|YP_003482959.1|	-	9.2	6.4	13.9	0.52	10.5	1.7	3.0	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF1272)
DUF131	PF01998.17	gi|289596264|ref|YP_003482960.1|	-	4.8e-21	74.2	4.1	2.1e-19	68.9	0.0	2.4	2	0	0	2	2	2	1	Protein	of	unknown	function	DUF131
DHHC	PF01529.20	gi|289596264|ref|YP_003482960.1|	-	0.28	11.3	3.7	0.25	11.4	1.6	1.9	1	1	1	2	2	2	0	DHHC	palmitoyltransferase
SdpI	PF13630.6	gi|289596264|ref|YP_003482960.1|	-	2.2	8.5	0.0	2.2	8.5	0.0	2.7	2	1	0	2	2	2	0	SdpI/YhfL	protein	family
DUF1925	PF09094.11	gi|289596265|ref|YP_003482961.1|	-	1.4	9.3	11.6	0.11	12.9	2.9	3.0	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF1925)
Tubulin	PF00091.25	gi|289596266|ref|YP_003482962.1|	-	1.3e-42	146.2	0.0	4e-42	144.7	0.0	1.8	2	0	0	2	2	2	1	Tubulin/FtsZ	family,	GTPase	domain
FtsZ_C	PF12327.8	gi|289596266|ref|YP_003482962.1|	-	3.6e-26	91.3	2.9	3.6e-26	91.3	2.9	1.8	2	0	0	2	2	2	1	FtsZ	family,	C-terminal	domain
Tubulin_2	PF13809.6	gi|289596266|ref|YP_003482962.1|	-	0.012	14.8	0.9	0.21	10.7	0.1	2.2	2	0	0	2	2	2	0	Tubulin	like
GHMP_kinases_C	PF08544.13	gi|289596266|ref|YP_003482962.1|	-	0.053	13.9	0.7	42	4.6	0.0	3.5	3	0	0	3	3	3	0	GHMP	kinases	C	terminal
MoCF_biosynth	PF00994.24	gi|289596266|ref|YP_003482962.1|	-	0.26	10.9	4.7	7.7	6.2	0.1	3.5	2	2	0	2	2	2	0	Probable	molybdopterin	binding	domain
GPI	PF06560.11	gi|289596267|ref|YP_003482963.1|	-	1.7e-37	128.4	0.3	2e-37	128.3	0.3	1.0	1	0	0	1	1	1	1	Glucose-6-phosphate	isomerase	(GPI)
Cupin_2	PF07883.11	gi|289596267|ref|YP_003482963.1|	-	2.3e-08	33.6	0.1	4e-08	32.8	0.1	1.5	1	0	0	1	1	1	1	Cupin	domain
Syntaxin	PF00804.25	gi|289596267|ref|YP_003482963.1|	-	0.0078	15.9	0.0	0.0098	15.6	0.0	1.1	1	0	0	1	1	1	1	Syntaxin
Cupin_1	PF00190.22	gi|289596267|ref|YP_003482963.1|	-	0.071	12.7	0.0	0.1	12.2	0.0	1.2	1	0	0	1	1	1	0	Cupin
TP_methylase	PF00590.20	gi|289596268|ref|YP_003482964.1|	-	4.4e-24	85.6	0.0	5.7e-24	85.2	0.0	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
DUF150_C	PF17384.2	gi|289596268|ref|YP_003482964.1|	-	0.13	12.5	0.4	1.2	9.3	0.1	2.5	2	1	0	2	2	2	0	RimP	C-terminal	SH3	domain
DUF2207	PF09972.9	gi|289596269|ref|YP_003482965.1|	-	0.028	13.2	0.5	0.026	13.3	0.5	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
Wzy_C	PF04932.15	gi|289596269|ref|YP_003482965.1|	-	0.034	13.8	2.4	0.043	13.4	2.4	1.1	1	0	0	1	1	1	0	O-Antigen	ligase
DUF4173	PF13777.6	gi|289596269|ref|YP_003482965.1|	-	0.036	13.5	1.1	0.045	13.2	1.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4173)
Adeno_E3_CR2	PF02439.15	gi|289596269|ref|YP_003482965.1|	-	0.11	12.3	0.6	0.11	12.3	0.6	2.2	2	0	0	2	2	2	0	Adenovirus	E3	region	protein	CR2
ECSCR	PF15820.5	gi|289596269|ref|YP_003482965.1|	-	0.21	11.4	2.1	1.4	8.8	0.5	2.0	1	1	1	2	2	2	0	Endothelial	cell-specific	chemotaxis	regulator
DUF2892	PF11127.8	gi|289596269|ref|YP_003482965.1|	-	0.7	10.0	4.4	0.92	9.6	4.4	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2892)
Neurensin	PF14927.6	gi|289596269|ref|YP_003482965.1|	-	1.8	8.3	4.0	4.2	7.1	4.0	1.7	1	1	0	1	1	1	0	Neurensin
DUF1700	PF08006.11	gi|289596271|ref|YP_003482967.1|	-	2.4e-05	24.0	19.6	0.00017	21.1	19.5	2.1	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1700)
Bac_DNA_binding	PF00216.21	gi|289596271|ref|YP_003482967.1|	-	0.068	13.4	0.2	0.11	12.7	0.2	1.3	1	0	0	1	1	1	0	Bacterial	DNA-binding	protein
DUF2207	PF09972.9	gi|289596271|ref|YP_003482967.1|	-	0.074	11.8	7.5	0.3	9.8	7.5	1.8	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
DUF433	PF04255.14	gi|289596271|ref|YP_003482967.1|	-	0.078	12.8	0.0	0.16	11.9	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF433)
PadR	PF03551.14	gi|289596272|ref|YP_003482968.1|	-	3.6e-25	87.7	0.5	4.9e-25	87.3	0.5	1.2	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
RTP	PF02334.16	gi|289596272|ref|YP_003482968.1|	-	9.4e-06	26.2	0.1	1.3e-05	25.8	0.1	1.1	1	0	0	1	1	1	1	Replication	terminator	protein
PaaX	PF07848.12	gi|289596272|ref|YP_003482968.1|	-	0.0023	18.1	0.0	0.0036	17.5	0.0	1.4	1	0	0	1	1	1	1	PaaX-like	protein
HTH_34	PF13601.6	gi|289596272|ref|YP_003482968.1|	-	0.0024	18.0	0.0	0.006	16.7	0.0	1.8	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
DUF505	PF04458.12	gi|289596272|ref|YP_003482968.1|	-	0.0025	16.3	0.1	0.0025	16.3	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF505)
MarR	PF01047.22	gi|289596272|ref|YP_003482968.1|	-	0.16	11.9	0.1	0.43	10.5	0.0	1.8	2	1	0	2	2	2	0	MarR	family
OsmC	PF02566.19	gi|289596274|ref|YP_003482970.1|	-	8.7e-19	67.9	0.0	1.1e-18	67.6	0.0	1.1	1	0	0	1	1	1	1	OsmC-like	protein
PNP_UDP_1	PF01048.20	gi|289596275|ref|YP_003482971.1|	-	1.5e-42	145.4	0.3	1.8e-42	145.2	0.3	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
Sm_multidrug_ex	PF06695.11	gi|289596276|ref|YP_003482972.1|	-	5.8e-44	149.6	3.6	7.7e-44	149.2	3.6	1.2	1	0	0	1	1	1	1	Putative	small	multi-drug	export	protein
ABC_export	PF16962.5	gi|289596276|ref|YP_003482972.1|	-	0.32	9.4	11.9	0.065	11.7	0.8	2.0	2	0	0	2	2	2	0	Putative	ABC	exporter
Ldh_2	PF02615.14	gi|289596277|ref|YP_003482973.1|	-	7.1e-124	413.3	0.1	8e-124	413.1	0.1	1.0	1	0	0	1	1	1	1	Malate/L-lactate	dehydrogenase
QueF	PF14489.6	gi|289596278|ref|YP_003482974.1|	-	1.2e-20	73.5	0.1	2.2e-20	72.6	0.1	1.5	2	0	0	2	2	2	1	QueF-like	protein
TonB_2	PF13103.6	gi|289596278|ref|YP_003482974.1|	-	0.062	13.6	0.0	0.1	12.8	0.0	1.3	1	0	0	1	1	1	0	TonB	C	terminal
Cupin_2	PF07883.11	gi|289596279|ref|YP_003482975.1|	-	1.2e-19	69.8	0.3	1.6e-19	69.4	0.3	1.2	1	0	0	1	1	1	1	Cupin	domain
AraC_binding	PF02311.19	gi|289596279|ref|YP_003482975.1|	-	4.2e-08	33.2	0.1	5.7e-08	32.8	0.1	1.2	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
Cupin_7	PF12973.7	gi|289596279|ref|YP_003482975.1|	-	2.3e-05	24.2	0.1	3e-05	23.9	0.1	1.3	1	0	0	1	1	1	1	ChrR	Cupin-like	domain
MannoseP_isomer	PF01050.18	gi|289596279|ref|YP_003482975.1|	-	4.7e-05	23.3	0.2	5e-05	23.2	0.2	1.1	1	0	0	1	1	1	1	Mannose-6-phosphate	isomerase
DMSP_lyase	PF16867.5	gi|289596279|ref|YP_003482975.1|	-	0.0024	17.5	0.3	0.0031	17.2	0.3	1.1	1	0	0	1	1	1	1	Dimethlysulfonioproprionate	lyase
Cupin_1	PF00190.22	gi|289596279|ref|YP_003482975.1|	-	0.0025	17.4	0.0	0.0058	16.3	0.0	1.5	1	1	0	1	1	1	1	Cupin
Pirin_C	PF05726.13	gi|289596279|ref|YP_003482975.1|	-	0.015	15.6	0.0	0.022	15.1	0.0	1.2	1	0	0	1	1	1	0	Pirin	C-terminal	cupin	domain
Asp_Arg_Hydrox	PF05118.15	gi|289596279|ref|YP_003482975.1|	-	0.017	14.9	0.1	0.077	12.8	0.1	1.9	1	1	0	1	1	1	0	Aspartyl/Asparaginyl	beta-hydroxylase
Cupin_3	PF05899.12	gi|289596279|ref|YP_003482975.1|	-	0.036	13.7	0.1	0.073	12.8	0.0	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF861)
DUF4147	PF13660.6	gi|289596281|ref|YP_003482977.1|	-	2.7e-56	190.7	0.0	3.8e-56	190.2	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4147)
MOFRL	PF05161.13	gi|289596281|ref|YP_003482977.1|	-	2.8e-31	107.9	0.3	4.8e-31	107.2	0.3	1.4	1	0	0	1	1	1	1	MOFRL	family
TFIIB	PF00382.19	gi|289596282|ref|YP_003482978.1|	-	2.2e-41	139.7	4.3	6.8e-23	80.5	0.2	2.4	2	0	0	2	2	2	2	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.12	gi|289596282|ref|YP_003482978.1|	-	2e-20	72.0	0.7	3.5e-20	71.3	0.7	1.3	1	0	0	1	1	1	1	TFIIB	zinc-binding
Cyclin_N	PF00134.23	gi|289596282|ref|YP_003482978.1|	-	7.6e-06	25.7	0.2	0.034	13.9	0.1	2.2	2	0	0	2	2	2	2	Cyclin,	N-terminal	domain
Cyclin_C	PF02984.19	gi|289596282|ref|YP_003482978.1|	-	2.6e-05	24.3	0.1	0.0082	16.2	0.0	2.3	1	1	1	2	2	2	1	Cyclin,	C-terminal	domain
Sigma70_r4	PF04545.16	gi|289596282|ref|YP_003482978.1|	-	3.1e-05	23.4	0.0	0.00067	19.1	0.1	2.6	2	0	0	2	2	2	1	Sigma-70,	region	4
TFIIB_C_1	PF18542.1	gi|289596282|ref|YP_003482978.1|	-	7.2e-05	22.7	0.6	0.048	13.7	0.0	2.3	2	0	0	2	2	2	2	Transcription	factor	IIB	C-terminal	module	1
UPF0253	PF06786.12	gi|289596282|ref|YP_003482978.1|	-	0.00019	21.7	1.2	0.016	15.5	0.0	3.6	4	0	0	4	4	4	1	Uncharacterised	protein	family	(UPF0253)
RB_B	PF01857.20	gi|289596282|ref|YP_003482978.1|	-	0.00062	19.8	0.1	0.014	15.5	0.0	2.3	1	1	1	2	2	2	1	Retinoblastoma-associated	protein	B	domain
A2L_zn_ribbon	PF08792.10	gi|289596282|ref|YP_003482978.1|	-	0.001	18.7	1.8	0.021	14.5	1.6	2.4	1	1	1	2	2	2	2	A2L	zinc	ribbon	domain
Sigma70_r4_2	PF08281.12	gi|289596282|ref|YP_003482978.1|	-	0.011	15.4	0.6	0.046	13.4	0.1	2.4	2	1	0	2	2	1	0	Sigma-70,	region	4
Lar_restr_allev	PF14354.6	gi|289596282|ref|YP_003482978.1|	-	0.013	15.9	0.2	0.032	14.6	0.2	1.7	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
Ribosomal_S27e	PF01667.17	gi|289596282|ref|YP_003482978.1|	-	0.017	14.8	0.0	0.03	14.0	0.0	1.4	1	0	0	1	1	1	0	Ribosomal	protein	S27
HTH_11	PF08279.12	gi|289596282|ref|YP_003482978.1|	-	0.027	14.4	0.0	0.058	13.4	0.0	1.5	1	0	0	1	1	1	0	HTH	domain
Zn-ribbon_8	PF09723.10	gi|289596282|ref|YP_003482978.1|	-	0.034	14.3	0.7	2.3	8.4	0.1	2.4	2	0	0	2	2	2	0	Zinc	ribbon	domain
HARE-HTH	PF05066.13	gi|289596282|ref|YP_003482978.1|	-	0.037	14.4	0.1	4.6	7.7	0.1	2.6	2	0	0	2	2	2	0	HB1,	ASXL,	restriction	endonuclease	HTH	domain
HTH_AsnC-type	PF13404.6	gi|289596282|ref|YP_003482978.1|	-	0.055	13.3	0.0	0.13	12.1	0.0	1.6	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
Zn_Tnp_IS1595	PF12760.7	gi|289596282|ref|YP_003482978.1|	-	0.088	12.8	0.5	0.19	11.7	0.5	1.5	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.11	gi|289596282|ref|YP_003482978.1|	-	0.092	12.7	0.4	0.25	11.3	0.4	1.6	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
zf-ribbon_3	PF13248.6	gi|289596282|ref|YP_003482978.1|	-	0.18	11.3	3.5	0.94	9.0	3.5	2.1	1	1	0	1	1	1	0	zinc-ribbon	domain
zf_UBZ	PF18439.1	gi|289596282|ref|YP_003482978.1|	-	0.18	11.4	0.5	16	5.2	0.1	2.5	2	0	0	2	2	2	0	Ubiquitin-Binding	Zinc	Finger
zf-RRN7	PF11781.8	gi|289596282|ref|YP_003482978.1|	-	0.19	11.4	2.6	0.43	10.3	2.6	1.6	1	1	0	1	1	1	0	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
zf-NADH-PPase	PF09297.11	gi|289596282|ref|YP_003482978.1|	-	0.21	11.3	3.5	1.4	8.6	0.1	3.0	3	0	0	3	3	3	0	NADH	pyrophosphatase	zinc	ribbon	domain
GerE	PF00196.19	gi|289596282|ref|YP_003482978.1|	-	0.22	11.1	3.0	1.3	8.7	0.1	2.7	3	0	0	3	3	2	0	Bacterial	regulatory	proteins,	luxR	family
zf-ACC	PF17848.1	gi|289596282|ref|YP_003482978.1|	-	0.33	11.1	5.4	9.8	6.4	0.0	3.5	3	0	0	3	3	3	0	Acetyl-coA	carboxylase	zinc	finger	domain
YhfH	PF14149.6	gi|289596282|ref|YP_003482978.1|	-	0.49	10.4	2.7	6.1	6.9	0.2	2.6	2	0	0	2	2	2	0	YhfH-like	protein
GATase	PF00117.28	gi|289596283|ref|YP_003482979.1|	-	9.5e-36	123.4	0.0	1.1e-35	123.2	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.13	gi|289596283|ref|YP_003482979.1|	-	4.3e-10	39.7	0.7	9.7e-09	35.3	0.4	2.5	1	1	1	2	2	2	1	Peptidase	C26
GATase_3	PF07685.14	gi|289596283|ref|YP_003482979.1|	-	0.014	15.0	0.0	0.021	14.4	0.0	1.3	1	0	0	1	1	1	0	CobB/CobQ-like	glutamine	amidotransferase	domain
DJ-1_PfpI	PF01965.24	gi|289596283|ref|YP_003482979.1|	-	0.046	13.5	0.0	0.07	12.9	0.0	1.2	1	0	0	1	1	1	0	DJ-1/PfpI	family
CorA	PF01544.18	gi|289596284|ref|YP_003482980.1|	-	2.4e-37	128.8	4.2	4.3e-37	128.0	4.2	1.3	1	1	0	1	1	1	1	CorA-like	Mg2+	transporter	protein
Rx_N	PF18052.1	gi|289596284|ref|YP_003482980.1|	-	0.03	14.6	0.4	0.38	11.0	0.6	2.2	1	1	1	2	2	2	0	Rx	N-terminal	domain
Gram_pos_anchor	PF00746.21	gi|289596284|ref|YP_003482980.1|	-	3.2	7.8	4.4	1.7	8.7	0.4	2.1	2	0	0	2	2	2	0	LPXTG	cell	wall	anchor	motif
PGK	PF00162.19	gi|289596285|ref|YP_003482981.1|	-	5.2e-104	348.2	0.0	6.1e-104	348.0	0.0	1.0	1	0	0	1	1	1	1	Phosphoglycerate	kinase
Usp	PF00582.26	gi|289596286|ref|YP_003482982.1|	-	2.3e-23	83.3	0.6	3.1e-14	53.7	0.0	3.1	2	1	1	3	3	3	3	Universal	stress	protein	family
MGS	PF02142.22	gi|289596286|ref|YP_003482982.1|	-	0.0082	16.3	0.1	0.23	11.7	0.0	2.4	1	1	1	2	2	2	2	MGS-like	domain
Toprim_4	PF13662.6	gi|289596286|ref|YP_003482982.1|	-	0.083	13.4	0.0	0.18	12.3	0.0	1.5	1	0	0	1	1	1	0	Toprim	domain
CitMHS	PF03600.16	gi|289596287|ref|YP_003482983.1|	-	5.5e-52	176.8	30.7	5.5e-52	176.8	30.7	1.9	1	1	1	2	2	2	2	Citrate	transporter
Na_sulph_symp	PF00939.19	gi|289596287|ref|YP_003482983.1|	-	1.5e-22	80.3	39.7	5.3e-14	52.1	19.1	2.0	1	1	1	2	2	2	2	Sodium:sulfate	symporter	transmembrane	region
ArsB	PF02040.15	gi|289596287|ref|YP_003482983.1|	-	1.7e-18	67.1	30.8	2.3e-18	66.7	30.8	1.0	1	0	0	1	1	1	1	Arsenical	pump	membrane	protein
NhaB	PF06450.12	gi|289596287|ref|YP_003482983.1|	-	4.7e-05	22.4	5.7	4.7e-05	22.4	5.7	2.6	2	1	0	2	2	2	1	Bacterial	Na+/H+	antiporter	B	(NhaB)
DcuA_DcuB	PF03605.14	gi|289596287|ref|YP_003482983.1|	-	0.0033	16.4	4.6	0.0033	16.4	4.6	2.1	2	0	0	2	2	2	1	Anaerobic	c4-dicarboxylate	membrane	transporter
CAAD	PF14159.6	gi|289596287|ref|YP_003482983.1|	-	0.13	12.1	0.3	0.13	12.1	0.3	3.2	4	0	0	4	4	4	0	CAAD	domains	of	cyanobacterial	aminoacyl-tRNA	synthetase
Amidohydro_1	PF01979.20	gi|289596288|ref|YP_003482984.1|	-	2.7e-21	76.3	0.0	2.2e-18	66.7	0.0	2.7	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.11	gi|289596288|ref|YP_003482984.1|	-	6.9e-05	22.5	0.0	0.04	13.4	0.0	2.5	2	1	1	3	3	3	2	Amidohydrolase	family
A_deaminase	PF00962.22	gi|289596288|ref|YP_003482984.1|	-	0.019	14.3	0.0	0.033	13.5	0.0	1.4	1	0	0	1	1	1	0	Adenosine/AMP	deaminase
DNA_pol_E_B	PF04042.16	gi|289596289|ref|YP_003482985.1|	-	4.3e-16	58.9	0.0	6.7e-16	58.3	0.0	1.3	1	0	0	1	1	1	1	DNA	polymerase	alpha/epsilon	subunit	B
Metallophos	PF00149.28	gi|289596289|ref|YP_003482985.1|	-	2e-14	54.6	0.4	4.5e-14	53.4	0.4	1.6	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|289596289|ref|YP_003482985.1|	-	1.5e-07	31.7	0.0	3.1e-07	30.7	0.0	1.5	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
DUF762	PF05555.11	gi|289596289|ref|YP_003482985.1|	-	0.0075	15.9	0.0	0.012	15.2	0.0	1.3	1	0	0	1	1	1	1	Coxiella	burnetii	protein	of	unknown	function	(DUF762)
Yos9_DD	PF17880.1	gi|289596289|ref|YP_003482985.1|	-	0.055	13.6	0.0	0.13	12.4	0.0	1.6	1	0	0	1	1	1	0	Yos9	dimerzation	domain
tRNA_anti-codon	PF01336.25	gi|289596289|ref|YP_003482985.1|	-	0.1	12.6	0.4	0.25	11.4	0.1	1.9	2	0	0	2	2	2	0	OB-fold	nucleic	acid	binding	domain
GHMP_kinases_N	PF00288.26	gi|289596290|ref|YP_003482986.1|	-	3.7e-08	33.5	0.1	8.3e-08	32.4	0.1	1.6	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
ARS2	PF04959.13	gi|289596290|ref|YP_003482986.1|	-	0.18	12.1	0.3	0.35	11.2	0.3	1.4	1	0	0	1	1	1	0	Arsenite-resistance	protein	2
DFP	PF04127.15	gi|289596291|ref|YP_003482987.1|	-	1.4e-37	129.3	0.0	6.2e-37	127.2	0.0	1.9	2	0	0	2	2	2	1	DNA	/	pantothenate	metabolism	flavoprotein
Flavoprotein	PF02441.19	gi|289596291|ref|YP_003482987.1|	-	1.2e-30	106.3	0.0	3.2e-30	104.9	0.1	1.7	2	0	0	2	2	2	1	Flavoprotein
DUF3093	PF11292.8	gi|289596292|ref|YP_003482988.1|	-	0.035	14.4	1.7	2.2	8.5	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3093)
Fumarate_red_C	PF02300.17	gi|289596292|ref|YP_003482988.1|	-	0.22	11.6	5.9	0.3	11.2	5.9	1.2	1	0	0	1	1	1	0	Fumarate	reductase	subunit	C
DUF2070	PF09843.9	gi|289596292|ref|YP_003482988.1|	-	0.7	8.1	8.2	0.85	7.8	8.2	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
Phage_holin_3_6	PF07332.11	gi|289596292|ref|YP_003482988.1|	-	2.1	8.4	9.0	3	7.9	9.0	1.3	1	0	0	1	1	1	0	Putative	Actinobacterial	Holin-X,	holin	superfamily	III
MFS_1	PF07690.16	gi|289596293|ref|YP_003482989.1|	-	1.5e-21	76.7	49.8	4.3e-12	45.6	18.2	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_2	PF13347.6	gi|289596293|ref|YP_003482989.1|	-	6.7e-13	48.0	30.3	1e-12	47.4	30.3	1.3	1	0	0	1	1	1	1	MFS/sugar	transport	protein
Sugar_tr	PF00083.24	gi|289596293|ref|YP_003482989.1|	-	3.8e-06	26.0	8.6	3.8e-06	26.0	8.6	2.8	3	1	0	3	3	3	2	Sugar	(and	other)	transporter
Hydrolase_4	PF12146.8	gi|289596294|ref|YP_003482990.1|	-	6.6e-16	58.3	0.4	8.5e-11	41.6	0.3	2.1	1	1	1	2	2	2	2	Serine	aminopeptidase,	S33
Abhydrolase_6	PF12697.7	gi|289596294|ref|YP_003482990.1|	-	4.8e-15	56.8	0.0	7.2e-15	56.2	0.0	1.4	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.20	gi|289596294|ref|YP_003482990.1|	-	4.5e-12	46.2	0.1	7.7e-08	32.3	0.1	2.1	1	1	1	2	2	2	2	alpha/beta	hydrolase	fold
Peptidase_S15	PF02129.18	gi|289596294|ref|YP_003482990.1|	-	6.1e-11	42.4	0.2	9.4e-06	25.4	0.4	2.1	2	0	0	2	2	2	2	X-Pro	dipeptidyl-peptidase	(S15	family)
FSH1	PF03959.13	gi|289596294|ref|YP_003482990.1|	-	1.1e-08	35.0	0.0	3.3e-08	33.5	0.0	1.7	2	1	0	2	2	2	1	Serine	hydrolase	(FSH1)
DLH	PF01738.18	gi|289596294|ref|YP_003482990.1|	-	7.6e-07	28.9	0.7	1.1e-05	25.2	0.7	2.4	1	1	0	1	1	1	1	Dienelactone	hydrolase	family
Peptidase_S9	PF00326.21	gi|289596294|ref|YP_003482990.1|	-	3.2e-05	23.5	0.1	0.00012	21.7	0.1	1.8	1	1	0	1	1	1	1	Prolyl	oligopeptidase	family
PGAP1	PF07819.13	gi|289596294|ref|YP_003482990.1|	-	0.0063	16.3	0.0	0.01	15.6	0.0	1.3	1	0	0	1	1	1	1	PGAP1-like	protein
AXE1	PF05448.12	gi|289596294|ref|YP_003482990.1|	-	0.0084	14.8	0.6	1.2	7.8	0.0	2.3	2	1	1	3	3	3	2	Acetyl	xylan	esterase	(AXE1)
DUF676	PF05057.14	gi|289596294|ref|YP_003482990.1|	-	0.022	14.3	0.0	0.036	13.6	0.0	1.3	1	0	0	1	1	1	0	Putative	serine	esterase	(DUF676)
Abhydrolase_2	PF02230.16	gi|289596294|ref|YP_003482990.1|	-	0.038	13.8	0.2	0.7	9.6	0.0	2.4	2	1	1	3	3	3	0	Phospholipase/Carboxylesterase
Cutinase	PF01083.22	gi|289596294|ref|YP_003482990.1|	-	0.058	13.4	0.1	0.09	12.7	0.1	1.3	1	0	0	1	1	1	0	Cutinase
Ser_hydrolase	PF06821.13	gi|289596294|ref|YP_003482990.1|	-	0.059	13.2	0.0	4.1	7.2	0.0	2.2	2	0	0	2	2	2	0	Serine	hydrolase
Abhydro_lipase	PF04083.16	gi|289596294|ref|YP_003482990.1|	-	0.13	11.9	0.0	0.22	11.1	0.0	1.4	1	0	0	1	1	1	0	Partial	alpha/beta-hydrolase	lipase	region
Lipase_2	PF01674.18	gi|289596294|ref|YP_003482990.1|	-	0.16	11.4	0.0	0.23	10.9	0.0	1.2	1	0	0	1	1	1	0	Lipase	(class	2)
PerB	PF06590.11	gi|289596295|ref|YP_003482991.1|	-	0.12	12.8	0.0	0.19	12.2	0.0	1.3	1	0	0	1	1	1	0	PerB	protein
tRNA-synt_2	PF00152.20	gi|289596296|ref|YP_003482992.1|	-	2.3e-82	276.6	2.3	2.9e-82	276.3	2.3	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.25	gi|289596296|ref|YP_003482992.1|	-	5.9e-12	45.4	0.1	1.5e-11	44.1	0.1	1.8	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.20	gi|289596296|ref|YP_003482992.1|	-	7e-09	35.5	1.2	3e-06	26.9	0.1	2.7	2	0	0	2	2	2	2	tRNA	synthetases	class	II	core	domain	(F)
Beta_helix	PF13229.6	gi|289596297|ref|YP_003482993.1|	-	6.7e-33	113.8	75.8	1.2e-21	77.3	38.0	3.2	1	1	1	2	2	2	2	Right	handed	beta	helix	region
NosD	PF05048.13	gi|289596297|ref|YP_003482993.1|	-	1.6e-26	93.1	53.1	1.6e-26	93.1	53.1	1.7	1	1	0	1	1	1	1	Periplasmic	copper-binding	protein	(NosD)
Aminotran_1_2	PF00155.21	gi|289596298|ref|YP_003482994.1|	-	1.1e-29	103.8	0.0	2.3e-29	102.7	0.0	1.4	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Cys_Met_Meta_PP	PF01053.20	gi|289596298|ref|YP_003482994.1|	-	0.0047	15.5	0.0	0.0061	15.1	0.0	1.2	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Alliinase_C	PF04864.13	gi|289596298|ref|YP_003482994.1|	-	0.0094	14.9	0.0	0.017	14.0	0.0	1.3	1	0	0	1	1	1	1	Allinase
T2SSE	PF00437.20	gi|289596299|ref|YP_003482995.1|	-	2e-09	36.9	0.5	1.2e-08	34.3	0.2	2.2	3	0	0	3	3	2	1	Type	II/IV	secretion	system	protein
KH_1	PF00013.29	gi|289596299|ref|YP_003482995.1|	-	4.7e-05	23.1	1.0	0.0021	17.9	0.1	3.0	2	0	0	2	2	2	1	KH	domain
AAA_16	PF13191.6	gi|289596299|ref|YP_003482995.1|	-	0.0027	18.1	0.0	0.0058	17.0	0.0	1.6	1	0	0	1	1	1	1	AAA	ATPase	domain
PIN_4	PF13638.6	gi|289596299|ref|YP_003482995.1|	-	0.0032	17.8	0.0	0.0076	16.5	0.0	1.7	1	0	0	1	1	1	1	PIN	domain
PIN	PF01850.21	gi|289596299|ref|YP_003482995.1|	-	0.0036	17.8	0.0	0.015	15.8	0.0	2.1	1	0	0	1	1	1	1	PIN	domain
AAA_29	PF13555.6	gi|289596299|ref|YP_003482995.1|	-	0.0051	16.5	0.0	0.013	15.2	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_18	PF13238.6	gi|289596299|ref|YP_003482995.1|	-	0.0068	16.9	0.0	0.082	13.5	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
AAA_30	PF13604.6	gi|289596299|ref|YP_003482995.1|	-	0.014	15.1	0.0	0.12	12.1	0.0	2.2	3	0	0	3	3	2	0	AAA	domain
Zeta_toxin	PF06414.12	gi|289596299|ref|YP_003482995.1|	-	0.015	14.6	0.0	0.038	13.3	0.0	1.7	1	0	0	1	1	1	0	Zeta	toxin
NTPase_1	PF03266.15	gi|289596299|ref|YP_003482995.1|	-	0.015	15.2	0.1	0.064	13.2	0.0	2.1	2	0	0	2	2	1	0	NTPase
ATP_bind_1	PF03029.17	gi|289596299|ref|YP_003482995.1|	-	0.016	15.0	0.1	0.046	13.5	0.1	1.8	2	0	0	2	2	1	0	Conserved	hypothetical	ATP	binding	protein
KH_2	PF07650.17	gi|289596299|ref|YP_003482995.1|	-	0.017	14.9	0.5	0.017	14.9	0.5	3.3	3	0	0	3	3	3	0	KH	domain
Viral_helicase1	PF01443.18	gi|289596299|ref|YP_003482995.1|	-	0.025	14.3	0.0	0.13	12.0	0.0	1.9	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
AAA_22	PF13401.6	gi|289596299|ref|YP_003482995.1|	-	0.025	14.8	0.0	1	9.6	0.0	3.0	3	1	0	3	3	3	0	AAA	domain
DUF815	PF05673.13	gi|289596299|ref|YP_003482995.1|	-	0.026	13.7	0.0	0.045	12.9	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
PIN_9	PF18477.1	gi|289596299|ref|YP_003482995.1|	-	0.032	14.5	1.4	0.69	10.2	0.0	3.7	4	0	0	4	4	4	0	PIN	like	domain
AAA_14	PF13173.6	gi|289596299|ref|YP_003482995.1|	-	0.033	14.2	0.0	0.078	13.0	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
MeaB	PF03308.16	gi|289596299|ref|YP_003482995.1|	-	0.043	12.8	0.0	0.083	11.9	0.0	1.4	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
TsaE	PF02367.17	gi|289596299|ref|YP_003482995.1|	-	0.043	13.8	0.0	0.099	12.6	0.0	1.6	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_5	PF07728.14	gi|289596299|ref|YP_003482995.1|	-	0.048	13.7	0.0	0.1	12.6	0.0	1.6	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
ABC_tran	PF00005.27	gi|289596299|ref|YP_003482995.1|	-	0.049	14.1	0.1	0.23	12.0	0.0	2.2	3	0	0	3	3	2	0	ABC	transporter
DnaB_C	PF03796.15	gi|289596299|ref|YP_003482995.1|	-	0.053	12.9	0.0	0.12	11.7	0.0	1.5	1	0	0	1	1	1	0	DnaB-like	helicase	C	terminal	domain
AAA	PF00004.29	gi|289596299|ref|YP_003482995.1|	-	0.073	13.5	0.0	0.17	12.3	0.0	1.7	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_33	PF13671.6	gi|289596299|ref|YP_003482995.1|	-	0.1	12.7	0.0	0.68	10.1	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
AAA_19	PF13245.6	gi|289596299|ref|YP_003482995.1|	-	0.11	12.8	0.0	0.46	10.8	0.0	2.0	2	0	0	2	2	1	0	AAA	domain
G-alpha	PF00503.20	gi|289596299|ref|YP_003482995.1|	-	0.12	11.5	0.0	0.16	11.1	0.0	1.2	1	0	0	1	1	1	0	G-protein	alpha	subunit
NACHT	PF05729.12	gi|289596299|ref|YP_003482995.1|	-	0.12	12.2	0.0	0.26	11.2	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
KH_5	PF13184.6	gi|289596299|ref|YP_003482995.1|	-	0.47	10.6	5.7	1.3	9.2	0.5	3.6	4	0	0	4	4	3	0	NusA-like	KH	domain
CYTH	PF01928.21	gi|289596300|ref|YP_003482996.1|	-	5.7e-31	107.8	2.4	6.4e-31	107.7	2.4	1.0	1	0	0	1	1	1	1	CYTH	domain
DUF4798	PF16055.5	gi|289596300|ref|YP_003482996.1|	-	0.075	13.3	0.7	0.37	11.1	0.1	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4798)
Zn_Tnp_IS1595	PF12760.7	gi|289596301|ref|YP_003482997.1|	-	0.00033	20.6	2.6	0.00087	19.2	0.8	2.0	2	0	0	2	2	2	1	Transposase	zinc-ribbon	domain
Lar_restr_allev	PF14354.6	gi|289596301|ref|YP_003482997.1|	-	0.00034	20.9	0.3	0.0004	20.7	0.3	1.1	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
Zn-ribbon_8	PF09723.10	gi|289596301|ref|YP_003482997.1|	-	0.00037	20.6	1.1	0.28	11.3	0.2	2.2	2	0	0	2	2	2	2	Zinc	ribbon	domain
OrfB_Zn_ribbon	PF07282.11	gi|289596301|ref|YP_003482997.1|	-	0.00037	20.4	0.7	0.00054	19.8	0.7	1.2	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
DZR	PF12773.7	gi|289596301|ref|YP_003482997.1|	-	0.0043	17.0	0.2	0.006	16.6	0.2	1.1	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_2	PF13240.6	gi|289596301|ref|YP_003482997.1|	-	0.017	14.8	2.7	1.4	8.7	0.2	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
Desulfoferrod_N	PF06397.12	gi|289596301|ref|YP_003482997.1|	-	0.025	14.2	4.0	0.028	14.1	0.5	2.2	2	0	0	2	2	2	0	Desulfoferrodoxin,	N-terminal	domain
Rubredoxin_2	PF18073.1	gi|289596301|ref|YP_003482997.1|	-	0.033	13.9	3.1	0.64	9.8	0.6	2.2	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
PADR1	PF08063.12	gi|289596301|ref|YP_003482997.1|	-	0.043	13.6	2.7	0.72	9.7	3.1	2.0	1	1	1	2	2	2	0	PADR1	(NUC008)	domain
TF_Zn_Ribbon	PF08271.12	gi|289596301|ref|YP_003482997.1|	-	0.065	12.8	5.2	0.54	9.8	5.2	2.2	1	1	0	1	1	1	0	TFIIB	zinc-binding
TFIIS_C	PF01096.18	gi|289596301|ref|YP_003482997.1|	-	0.08	12.8	2.6	3.6	7.5	0.1	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zf-Mss51	PF13824.6	gi|289596301|ref|YP_003482997.1|	-	0.1	12.7	1.2	0.19	11.9	1.2	1.5	1	1	0	1	1	1	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
zf-H2C2_2	PF13465.6	gi|289596301|ref|YP_003482997.1|	-	0.15	12.6	2.7	1.5	9.4	1.0	2.2	1	1	1	2	2	2	0	Zinc-finger	double	domain
Nudix_N_2	PF14803.6	gi|289596301|ref|YP_003482997.1|	-	0.19	11.7	4.4	7.8	6.5	1.3	2.4	2	0	0	2	2	2	0	Nudix	N-terminal
SHOCT	PF09851.9	gi|289596301|ref|YP_003482997.1|	-	0.19	11.5	1.1	0.27	11.0	1.1	1.2	1	0	0	1	1	1	0	Short	C-terminal	domain
zf-ribbon_3	PF13248.6	gi|289596301|ref|YP_003482997.1|	-	0.21	11.1	4.6	1.9	8.0	0.3	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
Rubredoxin	PF00301.20	gi|289596301|ref|YP_003482997.1|	-	0.28	11.3	3.0	4.3	7.4	0.5	2.2	2	0	0	2	2	2	0	Rubredoxin
RecR	PF02132.15	gi|289596301|ref|YP_003482997.1|	-	0.43	10.2	2.2	3.8	7.2	0.1	2.2	2	0	0	2	2	2	0	RecR	protein
zn-ribbon_14	PF16503.5	gi|289596301|ref|YP_003482997.1|	-	0.86	9.2	3.8	0.44	10.1	0.5	2.0	2	0	0	2	2	2	0	Zinc-ribbon
zf-ISL3	PF14690.6	gi|289596301|ref|YP_003482997.1|	-	2.2	9.0	5.3	2.5	8.9	0.3	2.2	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-IS66	PF13005.7	gi|289596301|ref|YP_003482997.1|	-	5.3	7.5	7.2	7.2	7.1	0.2	2.4	2	1	1	3	3	2	0	zinc-finger	binding	domain	of	transposase	IS66
Pyrophosphatase	PF00719.19	gi|289596302|ref|YP_003482998.1|	-	1.1e-50	171.6	0.2	1.2e-50	171.4	0.2	1.0	1	0	0	1	1	1	1	Inorganic	pyrophosphatase
ABC2_membrane_2	PF12679.7	gi|289596303|ref|YP_003482999.1|	-	0.011	15.1	5.3	0.013	14.8	5.3	1.1	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
DUF2569	PF10754.9	gi|289596303|ref|YP_003482999.1|	-	4	7.9	17.1	18	5.8	17.2	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2569)
Laminin_I	PF06008.14	gi|289596304|ref|YP_003483000.1|	-	0.0026	17.5	1.9	0.0026	17.5	1.9	1.0	1	0	0	1	1	1	1	Laminin	Domain	I
DUF1664	PF07889.12	gi|289596304|ref|YP_003483000.1|	-	0.0033	17.4	1.7	0.0044	17.0	1.7	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1664)
SKA2	PF16740.5	gi|289596304|ref|YP_003483000.1|	-	0.0052	16.6	1.0	0.007	16.1	1.0	1.2	1	0	0	1	1	1	1	Spindle	and	kinetochore-associated	protein	2
Paralemmin	PF03285.15	gi|289596304|ref|YP_003483000.1|	-	0.0052	16.4	4.8	0.0065	16.1	4.8	1.1	1	0	0	1	1	1	1	Paralemmin
Syntaxin-6_N	PF09177.11	gi|289596304|ref|YP_003483000.1|	-	0.0077	16.8	3.7	0.011	16.3	3.7	1.3	1	1	0	1	1	1	1	Syntaxin	6,	N-terminal
Glyco_transf_10	PF00852.19	gi|289596304|ref|YP_003483000.1|	-	0.0093	15.7	0.8	0.01	15.5	0.8	1.2	1	0	0	1	1	1	1	Glycosyltransferase	family	10	(fucosyltransferase)	C-term
CALCOCO1	PF07888.11	gi|289596304|ref|YP_003483000.1|	-	0.011	14.6	7.8	0.011	14.6	7.8	1.0	1	0	0	1	1	1	0	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
ADIP	PF11559.8	gi|289596304|ref|YP_003483000.1|	-	0.018	15.1	4.0	0.021	14.9	4.0	1.1	1	0	0	1	1	1	0	Afadin-	and	alpha	-actinin-Binding
DUF4686	PF15742.5	gi|289596304|ref|YP_003483000.1|	-	0.025	13.8	10.8	0.03	13.5	10.8	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4686)
DUF2408	PF10303.9	gi|289596304|ref|YP_003483000.1|	-	0.029	14.9	3.4	0.038	14.5	3.4	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2408)
Serine_rich	PF08824.10	gi|289596304|ref|YP_003483000.1|	-	0.055	13.5	1.3	0.097	12.7	1.3	1.5	1	1	0	1	1	1	0	Serine	rich	protein	interaction	domain
Rx_N	PF18052.1	gi|289596304|ref|YP_003483000.1|	-	0.069	13.4	6.4	0.12	12.7	6.5	1.5	1	1	0	1	1	1	0	Rx	N-terminal	domain
IL11	PF07400.11	gi|289596304|ref|YP_003483000.1|	-	0.085	12.5	2.5	0.18	11.4	1.5	1.7	1	1	1	2	2	2	0	Interleukin	11
SOGA	PF11365.8	gi|289596304|ref|YP_003483000.1|	-	0.095	13.8	4.0	0.095	13.8	4.0	2.3	1	1	1	2	2	2	0	Protein	SOGA
BRE1	PF08647.11	gi|289596304|ref|YP_003483000.1|	-	0.096	12.8	11.6	0.23	11.5	11.4	1.7	1	1	0	1	1	1	0	BRE1	E3	ubiquitin	ligase
DUF4200	PF13863.6	gi|289596304|ref|YP_003483000.1|	-	0.11	12.9	15.3	0.17	12.3	15.3	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4200)
APG6_N	PF17675.1	gi|289596304|ref|YP_003483000.1|	-	0.13	12.8	12.0	0.17	12.5	12.0	1.1	1	0	0	1	1	1	0	Apg6	coiled-coil	region
Glyco_hydro_77	PF02446.17	gi|289596304|ref|YP_003483000.1|	-	0.31	9.8	5.4	0.36	9.6	5.4	1.0	1	0	0	1	1	1	0	4-alpha-glucanotransferase
DUF4337	PF14235.6	gi|289596304|ref|YP_003483000.1|	-	0.42	10.7	2.5	0.49	10.5	2.5	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4337)
DivIVA	PF05103.13	gi|289596304|ref|YP_003483000.1|	-	0.71	10.0	9.4	1.8	8.7	9.4	1.8	1	1	0	1	1	1	0	DivIVA	protein
Mit_ribos_Mrp51	PF11709.8	gi|289596304|ref|YP_003483000.1|	-	0.86	9.1	4.8	0.95	9.0	4.8	1.0	1	0	0	1	1	1	0	Mitochondrial	ribosomal	protein	subunit
AAA_23	PF13476.6	gi|289596304|ref|YP_003483000.1|	-	1	9.8	10.0	1.2	9.6	10.0	1.2	1	0	0	1	1	1	0	AAA	domain
XhlA	PF10779.9	gi|289596304|ref|YP_003483000.1|	-	1.1	9.5	6.1	2.1	8.6	6.1	1.5	1	1	0	1	1	1	0	Haemolysin	XhlA
ArAE_2_N	PF10337.9	gi|289596304|ref|YP_003483000.1|	-	2.1	7.3	4.2	2.5	7.0	4.2	1.1	1	0	0	1	1	1	0	Putative	ER	transporter,	6TM,	N-terminal
DMPK_coil	PF08826.10	gi|289596304|ref|YP_003483000.1|	-	2.2	8.5	13.1	3.6	7.8	7.0	2.3	1	1	1	2	2	2	0	DMPK	coiled	coil	domain	like
DUF5320	PF17253.2	gi|289596304|ref|YP_003483000.1|	-	4.5	8.4	6.9	0.66	11.1	1.2	2.0	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5320)
DUF3606	PF12244.8	gi|289596305|ref|YP_003483001.1|	-	0.0099	15.8	0.0	0.022	14.7	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3606)
CALCOCO1	PF07888.11	gi|289596306|ref|YP_003483002.1|	-	0.0011	18.0	6.6	0.0011	17.9	6.6	1.1	1	0	0	1	1	1	1	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
Glyco_hydro_77	PF02446.17	gi|289596306|ref|YP_003483002.1|	-	0.002	17.0	2.2	0.0022	16.9	2.2	1.0	1	0	0	1	1	1	1	4-alpha-glucanotransferase
Rx_N	PF18052.1	gi|289596306|ref|YP_003483002.1|	-	0.0036	17.5	2.7	0.0036	17.5	2.7	1.6	2	0	0	2	2	2	1	Rx	N-terminal	domain
XhlA	PF10779.9	gi|289596306|ref|YP_003483002.1|	-	0.0041	17.3	2.6	0.0041	17.3	2.6	1.9	2	0	0	2	2	2	1	Haemolysin	XhlA
DUF1664	PF07889.12	gi|289596306|ref|YP_003483002.1|	-	0.039	14.0	2.2	0.049	13.7	1.7	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
Mvb12	PF09452.10	gi|289596306|ref|YP_003483002.1|	-	0.051	14.0	2.1	0.071	13.5	2.0	1.4	1	1	0	1	1	1	0	ESCRT-I	subunit	Mvb12
FlxA	PF14282.6	gi|289596306|ref|YP_003483002.1|	-	0.053	13.5	0.8	0.081	12.9	0.8	1.3	1	0	0	1	1	1	0	FlxA-like	protein
bZIP_Maf	PF03131.17	gi|289596306|ref|YP_003483002.1|	-	0.07	13.7	6.6	0.47	11.0	6.6	2.0	1	1	0	1	1	1	0	bZIP	Maf	transcription	factor
Cnn_1N	PF07989.11	gi|289596306|ref|YP_003483002.1|	-	0.22	11.7	11.8	0.16	12.2	8.4	2.2	1	1	1	2	2	2	0	Centrosomin	N-terminal	motif	1
DUF4337	PF14235.6	gi|289596306|ref|YP_003483002.1|	-	0.29	11.3	2.0	0.33	11.1	2.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4337)
NBP1	PF08537.10	gi|289596306|ref|YP_003483002.1|	-	0.46	9.9	9.6	0.53	9.6	9.6	1.1	1	0	0	1	1	1	0	Fungal	Nap	binding	protein	NBP1
JAKMIP_CC3	PF16034.5	gi|289596306|ref|YP_003483002.1|	-	0.55	10.2	11.0	0.58	10.1	7.8	2.0	1	1	1	2	2	2	0	JAKMIP	CC3	domain
DUF5320	PF17253.2	gi|289596306|ref|YP_003483002.1|	-	0.56	11.3	4.7	0.14	13.2	1.7	1.6	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5320)
DUF2205	PF10224.9	gi|289596306|ref|YP_003483002.1|	-	0.8	9.7	7.4	0.95	9.5	4.8	2.1	1	1	1	2	2	2	0	Short	coiled-coil	protein
AAA_23	PF13476.6	gi|289596306|ref|YP_003483002.1|	-	2.5	8.6	8.7	2.7	8.5	8.7	1.2	1	0	0	1	1	1	0	AAA	domain
E2F_CC-MB	PF16421.5	gi|289596306|ref|YP_003483002.1|	-	3.7	8.0	6.6	6.4	7.2	4.5	2.1	1	1	1	2	2	2	0	E2F	transcription	factor	CC-MB	domain
TSC22	PF01166.18	gi|289596307|ref|YP_003483003.1|	-	0.0095	16.2	0.6	0.0095	16.2	0.6	2.4	3	1	0	3	3	3	1	TSC-22/dip/bun	family
ABC_transp_aux	PF09822.9	gi|289596307|ref|YP_003483003.1|	-	0.061	12.8	0.9	0.068	12.6	0.9	1.1	1	0	0	1	1	1	0	ABC-type	uncharacterized	transport	system
DUF4446	PF14584.6	gi|289596307|ref|YP_003483003.1|	-	0.069	13.1	4.9	0.064	13.2	2.2	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4446)
PSK_trans_fac	PF07704.11	gi|289596307|ref|YP_003483003.1|	-	0.072	13.8	0.2	0.1	13.4	0.2	1.3	1	0	0	1	1	1	0	Rv0623-like	transcription	factor
APG6_N	PF17675.1	gi|289596307|ref|YP_003483003.1|	-	0.11	13.0	6.4	0.22	12.0	6.4	1.6	1	1	0	1	1	1	0	Apg6	coiled-coil	region
MnmE_helical	PF12631.7	gi|289596307|ref|YP_003483003.1|	-	0.17	12.1	0.7	0.24	11.6	0.7	1.2	1	0	0	1	1	1	0	MnmE	helical	domain
Prp19	PF08606.11	gi|289596307|ref|YP_003483003.1|	-	0.28	11.2	2.3	3.6	7.6	0.1	2.4	1	1	1	2	2	2	0	Prp19/Pso4-like
KilA-N	PF04383.13	gi|289596307|ref|YP_003483003.1|	-	0.34	10.8	4.0	0.55	10.1	4.1	1.6	1	1	0	1	1	1	0	KilA-N	domain
YabA	PF06156.13	gi|289596307|ref|YP_003483003.1|	-	0.72	10.5	5.9	0.3	11.8	1.0	2.3	1	1	1	2	2	2	0	Initiation	control	protein	YabA
MFS_1	PF07690.16	gi|289596308|ref|YP_003483004.1|	-	3.1e-19	69.1	18.9	3.1e-19	69.1	18.9	2.1	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
MFS_3	PF05977.13	gi|289596308|ref|YP_003483004.1|	-	0.0011	17.5	11.6	0.0071	14.8	11.6	2.0	1	1	0	1	1	1	1	Transmembrane	secretion	effector
MFS_1_like	PF12832.7	gi|289596308|ref|YP_003483004.1|	-	0.0021	17.0	28.3	0.0036	16.2	27.1	1.9	1	1	0	1	1	1	1	MFS_1	like	family
Orai-1	PF07856.12	gi|289596309|ref|YP_003483005.1|	-	0.0038	16.9	0.4	0.005	16.5	0.4	1.2	1	0	0	1	1	1	1	Mediator	of	CRAC	channel	activity
Tetraspanin	PF00335.20	gi|289596309|ref|YP_003483005.1|	-	0.0093	15.7	3.1	0.012	15.4	3.1	1.2	1	0	0	1	1	1	1	Tetraspanin	family
DUF973	PF06157.11	gi|289596309|ref|YP_003483005.1|	-	0.024	13.7	6.1	0.031	13.3	6.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF973)
DUF3899	PF13038.6	gi|289596309|ref|YP_003483005.1|	-	0.067	13.7	10.5	0.064	13.8	6.2	2.4	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3899)
TMEM70	PF06979.12	gi|289596309|ref|YP_003483005.1|	-	0.26	11.7	3.4	1.4	9.4	2.8	2.1	1	1	0	1	1	1	0	Assembly,	mitochondrial	proton-transport	ATP	synth	complex
DUF3671	PF12420.8	gi|289596309|ref|YP_003483005.1|	-	0.27	11.3	8.4	0.85	9.7	8.5	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function
DUF2207	PF09972.9	gi|289596309|ref|YP_003483005.1|	-	0.44	9.3	4.1	0.64	8.7	4.1	1.2	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
PIG-Y	PF15159.6	gi|289596309|ref|YP_003483005.1|	-	0.49	11.3	0.1	0.49	11.3	0.1	2.2	2	0	0	2	2	2	0	Phosphatidylinositol	N-acetylglucosaminyltransferase	subunit	Y
DUF2721	PF11026.8	gi|289596309|ref|YP_003483005.1|	-	0.77	9.7	6.0	4.3	7.2	0.3	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2721)
DUF1218	PF06749.12	gi|289596309|ref|YP_003483005.1|	-	0.98	10.0	7.5	0.27	11.8	1.4	2.1	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1218)
Ribosomal_S3Ae	PF01015.18	gi|289596310|ref|YP_003483006.1|	-	2.2e-65	220.1	1.6	2.7e-65	219.8	1.6	1.1	1	0	0	1	1	1	1	Ribosomal	S3Ae	family
DUF1495	PF07381.11	gi|289596310|ref|YP_003483006.1|	-	0.057	13.3	0.1	0.2	11.5	0.2	1.9	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain	(DUF1495)
Spore_II_R	PF09551.10	gi|289596310|ref|YP_003483006.1|	-	0.17	12.4	0.8	0.39	11.2	0.8	1.8	1	1	0	1	1	1	0	Stage	II	sporulation	protein	R	(spore_II_R)
PALP	PF00291.25	gi|289596311|ref|YP_003483007.1|	-	2.8e-63	214.1	0.0	3.3e-63	213.8	0.0	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
TrkA_N	PF02254.18	gi|289596311|ref|YP_003483007.1|	-	2.4e-05	24.6	0.1	8.9e-05	22.7	0.0	1.9	2	0	0	2	2	2	1	TrkA-N	domain
DZR	PF12773.7	gi|289596311|ref|YP_003483007.1|	-	0.0065	16.5	0.9	0.011	15.7	0.9	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-C3HC4_3	PF13920.6	gi|289596311|ref|YP_003483007.1|	-	0.0097	15.8	1.4	0.019	14.8	1.4	1.5	1	0	0	1	1	1	1	Zinc	finger,	C3HC4	type	(RING	finger)
HypA	PF01155.19	gi|289596311|ref|YP_003483007.1|	-	0.034	14.2	0.8	0.069	13.2	0.8	1.5	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Orthopox_F6	PF06601.12	gi|289596311|ref|YP_003483007.1|	-	0.047	13.8	0.0	0.25	11.5	0.0	2.2	2	0	0	2	2	2	0	Orthopoxvirus	F6	protein
ADK_lid	PF05191.14	gi|289596311|ref|YP_003483007.1|	-	0.078	13.0	0.4	0.16	12.0	0.4	1.5	1	0	0	1	1	1	0	Adenylate	kinase,	active	site	lid
Zn-ribbon_8	PF09723.10	gi|289596311|ref|YP_003483007.1|	-	0.092	12.9	1.5	0.18	12.0	1.5	1.5	1	0	0	1	1	1	0	Zinc	ribbon	domain
zinc-ribbons_6	PF07191.12	gi|289596311|ref|YP_003483007.1|	-	0.14	12.1	1.2	0.26	11.3	1.2	1.4	1	0	0	1	1	1	0	zinc-ribbons
zf-C3HC4_2	PF13923.6	gi|289596311|ref|YP_003483007.1|	-	0.14	12.0	2.6	0.33	10.8	2.6	1.6	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
TF_Zn_Ribbon	PF08271.12	gi|289596311|ref|YP_003483007.1|	-	4.2	7.0	5.5	23	4.6	0.1	2.9	3	0	0	3	3	3	0	TFIIB	zinc-binding
SHMT	PF00464.19	gi|289596312|ref|YP_003483008.1|	-	3.9e-40	137.7	0.1	1.1e-39	136.2	0.1	1.6	1	1	0	1	1	1	1	Serine	hydroxymethyltransferase
Beta_elim_lyase	PF01212.21	gi|289596312|ref|YP_003483008.1|	-	0.00099	18.5	0.0	0.0033	16.7	0.0	2.0	1	1	0	1	1	1	1	Beta-eliminating	lyase
Cys_Met_Meta_PP	PF01053.20	gi|289596312|ref|YP_003483008.1|	-	0.04	12.4	0.0	0.054	12.0	0.0	1.2	1	0	0	1	1	1	0	Cys/Met	metabolism	PLP-dependent	enzyme
DegT_DnrJ_EryC1	PF01041.17	gi|289596312|ref|YP_003483008.1|	-	0.058	12.7	0.0	0.098	11.9	0.0	1.3	1	0	0	1	1	1	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
FTHFS	PF01268.19	gi|289596313|ref|YP_003483009.1|	-	2.5e-222	739.0	0.0	2.8e-222	738.8	0.0	1.0	1	0	0	1	1	1	1	Formate--tetrahydrofolate	ligase
Peptidase_S66	PF02016.15	gi|289596313|ref|YP_003483009.1|	-	0.0056	16.8	0.0	0.015	15.4	0.0	1.7	1	0	0	1	1	1	1	LD-carboxypeptidase	N-terminal	domain
AP_endonuc_2	PF01261.24	gi|289596314|ref|YP_003483010.1|	-	3.5e-11	42.9	0.0	7.7e-11	41.8	0.0	1.6	2	0	0	2	2	2	1	Xylose	isomerase-like	TIM	barrel
UvdE	PF03851.14	gi|289596314|ref|YP_003483010.1|	-	0.00027	20.3	0.0	0.00047	19.5	0.0	1.3	1	0	0	1	1	1	1	UV-endonuclease	UvdE
SIS	PF01380.22	gi|289596315|ref|YP_003483011.1|	-	2.3e-22	79.2	0.0	3.1e-22	78.8	0.0	1.2	1	0	0	1	1	1	1	SIS	domain
SIS_2	PF13580.6	gi|289596315|ref|YP_003483011.1|	-	7.4e-07	29.3	1.1	0.00061	19.8	0.3	2.2	1	1	1	2	2	2	2	SIS	domain
RNA_binding	PF01877.17	gi|289596316|ref|YP_003483012.1|	-	2.8e-12	46.9	0.7	1.6e-11	44.5	0.7	1.9	1	1	0	1	1	1	1	RNA	binding
CPBP	PF02517.16	gi|289596317|ref|YP_003483013.1|	-	7e-14	52.0	6.2	7e-14	52.0	6.2	3.4	3	1	0	3	3	2	1	CPBP	intramembrane	metalloprotease
TF_Zn_Ribbon	PF08271.12	gi|289596317|ref|YP_003483013.1|	-	2.2e-05	23.9	2.0	4.2e-05	23.0	2.0	1.5	1	0	0	1	1	1	1	TFIIB	zinc-binding
OrfB_Zn_ribbon	PF07282.11	gi|289596317|ref|YP_003483013.1|	-	0.019	14.9	1.0	0.032	14.1	1.0	1.3	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
zf-ribbon_3	PF13248.6	gi|289596317|ref|YP_003483013.1|	-	0.042	13.3	1.3	3.1	7.4	0.2	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
Auto_anti-p27	PF06677.12	gi|289596317|ref|YP_003483013.1|	-	0.047	13.9	1.0	0.1	12.8	1.0	1.5	1	0	0	1	1	1	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zinc_ribbon_5	PF13719.6	gi|289596317|ref|YP_003483013.1|	-	0.069	12.9	0.8	0.16	11.8	0.8	1.6	1	1	0	1	1	1	0	zinc-ribbon	domain
DZR	PF12773.7	gi|289596317|ref|YP_003483013.1|	-	0.095	12.7	0.2	0.15	12.1	0.2	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
zf_Rg	PF17915.1	gi|289596317|ref|YP_003483013.1|	-	0.11	11.9	0.6	0.21	11.0	0.6	1.4	1	0	0	1	1	1	0	Reverse	gyrase	zinc	finger
DUF2318	PF10080.9	gi|289596317|ref|YP_003483013.1|	-	0.11	12.6	0.3	0.18	11.9	0.3	1.2	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2318)
DUF2072	PF09845.9	gi|289596317|ref|YP_003483013.1|	-	0.13	12.5	0.7	0.37	11.1	0.6	1.7	1	1	0	1	1	1	0	Zn-ribbon	containing	protein
RNA_POL_M_15KD	PF02150.16	gi|289596317|ref|YP_003483013.1|	-	0.23	11.4	0.4	0.4	10.6	0.4	1.3	1	0	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
DUF5305	PF17231.2	gi|289596317|ref|YP_003483013.1|	-	8.7	5.7	7.2	0.6	9.5	0.2	2.2	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5305)
Arch_flagellin	PF01917.16	gi|289596318|ref|YP_003483014.1|	-	8.3e-28	97.6	9.9	1.2e-17	64.6	12.4	2.2	1	1	1	2	2	2	2	Archaebacterial	flagellin
Shisa	PF13908.6	gi|289596318|ref|YP_003483014.1|	-	0.18	12.0	0.1	0.27	11.4	0.1	1.2	1	0	0	1	1	1	0	Wnt	and	FGF	inhibitory	regulator
Arch_fla_DE	PF04659.13	gi|289596319|ref|YP_003483015.1|	-	1.3e-20	73.1	0.0	1.9e-20	72.5	0.0	1.2	1	0	0	1	1	1	1	Archaeal	flagella	protein
LigT_PEase	PF02834.16	gi|289596319|ref|YP_003483015.1|	-	0.076	13.2	0.0	0.11	12.6	0.0	1.3	1	0	0	1	1	1	0	LigT	like	Phosphoesterase
Cir_Bir_Yir	PF06022.11	gi|289596319|ref|YP_003483015.1|	-	0.18	11.3	0.0	0.23	10.9	0.0	1.1	1	0	0	1	1	1	0	Plasmodium	variant	antigen	protein	Cir/Yir/Bir
THUMP	PF02926.17	gi|289596320|ref|YP_003483016.1|	-	1.8e-11	44.3	0.2	1.8e-11	44.3	0.2	2.0	2	0	0	2	2	2	1	THUMP	domain
Zw10	PF06248.13	gi|289596320|ref|YP_003483016.1|	-	0.051	12.1	0.1	0.077	11.5	0.1	1.2	1	0	0	1	1	1	0	Centromere/kinetochore	Zw10
Calpain_inhib	PF00748.19	gi|289596320|ref|YP_003483016.1|	-	0.15	12.6	0.3	0.25	11.8	0.3	1.3	1	0	0	1	1	1	0	Calpain	inhibitor
MarC	PF01914.17	gi|289596321|ref|YP_003483017.1|	-	2e-49	167.8	13.5	2.2e-49	167.6	13.5	1.0	1	0	0	1	1	1	1	MarC	family	integral	membrane	protein
LysE	PF01810.18	gi|289596321|ref|YP_003483017.1|	-	0.0015	18.0	7.0	0.033	13.6	1.3	2.1	2	0	0	2	2	2	2	LysE	type	translocator
RseC_MucC	PF04246.12	gi|289596321|ref|YP_003483017.1|	-	0.062	13.3	6.4	0.26	11.3	0.4	2.4	2	0	0	2	2	2	0	Positive	regulator	of	sigma(E),	RseC/MucC
DUF2684	PF10885.8	gi|289596321|ref|YP_003483017.1|	-	0.065	13.4	1.2	0.08	13.1	0.3	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2684)
ABC2_membrane_2	PF12679.7	gi|289596321|ref|YP_003483017.1|	-	0.12	11.6	14.5	0.036	13.3	5.1	2.1	1	1	1	2	2	2	0	ABC-2	family	transporter	protein
Yip1	PF04893.17	gi|289596321|ref|YP_003483017.1|	-	0.18	11.5	18.6	3.5	7.3	18.7	2.2	1	1	0	1	1	1	0	Yip1	domain
DUF3792	PF12670.7	gi|289596321|ref|YP_003483017.1|	-	0.66	10.2	16.3	0.05	13.8	4.9	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3792)
Wzy_C	PF04932.15	gi|289596321|ref|YP_003483017.1|	-	1.4	8.5	7.9	3.7	7.2	3.3	2.3	2	0	0	2	2	2	0	O-Antigen	ligase
CBP_BcsF	PF11120.8	gi|289596321|ref|YP_003483017.1|	-	2.6	8.2	5.1	0.57	10.3	0.2	2.3	2	0	0	2	2	2	0	Cellulose	biosynthesis	protein	BcsF
DUF2207	PF09972.9	gi|289596321|ref|YP_003483017.1|	-	8.2	5.1	10.5	20	3.8	9.8	1.8	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
DUF1673	PF07895.11	gi|289596321|ref|YP_003483017.1|	-	8.9	6.0	11.2	21	4.7	11.2	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1673)
UPF0147	PF03685.13	gi|289596322|ref|YP_003483018.1|	-	1.7e-30	104.9	0.2	1.9e-30	104.7	0.2	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0147)
RNA_pol_Rpb1_6	PF04992.14	gi|289596322|ref|YP_003483018.1|	-	0.0033	17.3	0.1	0.0033	17.3	0.1	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	6
AsnC_trans_reg	PF01037.21	gi|289596323|ref|YP_003483019.1|	-	5.2e-19	68.0	0.2	7.2e-19	67.5	0.2	1.2	1	0	0	1	1	1	1	Lrp/AsnC	ligand	binding	domain
GYD	PF08734.11	gi|289596323|ref|YP_003483019.1|	-	0.0027	17.6	0.0	0.004	17.1	0.0	1.3	1	0	0	1	1	1	1	GYD	domain
Radical_SAM	PF04055.21	gi|289596324|ref|YP_003483020.1|	-	1.1e-08	35.6	0.1	5.5e-08	33.4	0.0	2.0	1	1	1	2	2	2	1	Radical	SAM	superfamily
RuvX	PF03652.15	gi|289596324|ref|YP_003483020.1|	-	0.073	13.5	0.0	0.17	12.3	0.0	1.6	1	0	0	1	1	1	0	Holliday	junction	resolvase
Beta_helix	PF13229.6	gi|289596325|ref|YP_003483021.1|	-	5.1e-72	240.9	208.8	1.5e-23	83.4	55.2	5.3	1	1	3	5	5	5	4	Right	handed	beta	helix	region
NosD	PF05048.13	gi|289596325|ref|YP_003483021.1|	-	7.9e-69	231.6	166.7	1.7e-30	106.0	50.5	4.8	1	1	3	4	4	4	4	Periplasmic	copper-binding	protein	(NosD)
fn3	PF00041.21	gi|289596325|ref|YP_003483021.1|	-	2.1e-05	24.7	3.0	6.4e-05	23.2	3.0	1.9	1	0	0	1	1	1	1	Fibronectin	type	III	domain
Pectate_lyase_3	PF12708.7	gi|289596325|ref|YP_003483021.1|	-	0.001	19.0	128.9	0.0021	17.9	13.4	8.3	2	1	8	10	10	10	5	Pectate	lyase	superfamily	protein
RGI_lyase	PF18370.1	gi|289596325|ref|YP_003483021.1|	-	0.02	15.2	0.3	0.049	13.9	0.3	1.7	1	0	0	1	1	1	0	Rhamnogalacturonan	I	lyases	beta-sheet	domain
DUF1565	PF07602.11	gi|289596325|ref|YP_003483021.1|	-	0.036	13.4	97.8	0.077	12.3	9.3	6.0	1	1	3	4	4	4	0	Protein	of	unknown	function	(DUF1565)
Acetyltransf_1	PF00583.25	gi|289596326|ref|YP_003483022.1|	-	1e-13	51.5	0.1	1.9e-13	50.7	0.1	1.5	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.7	gi|289596326|ref|YP_003483022.1|	-	6e-10	39.4	0.0	1.1e-09	38.6	0.0	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.7	gi|289596326|ref|YP_003483022.1|	-	8.3e-07	29.8	0.1	5.4e-06	27.1	0.0	2.0	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.7	gi|289596326|ref|YP_003483022.1|	-	7.8e-05	22.8	0.1	0.001	19.2	0.1	2.3	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.7	gi|289596326|ref|YP_003483022.1|	-	7.9e-05	22.6	0.0	0.00016	21.6	0.0	1.5	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.10	gi|289596326|ref|YP_003483022.1|	-	0.0024	17.8	0.0	0.013	15.4	0.0	2.0	2	0	0	2	2	2	1	FR47-like	protein
Acetyltransf_CG	PF14542.6	gi|289596326|ref|YP_003483022.1|	-	0.0085	16.2	0.0	0.018	15.1	0.0	1.5	1	0	0	1	1	1	1	GCN5-related	N-acetyl-transferase
Acetyltransf_4	PF13420.7	gi|289596326|ref|YP_003483022.1|	-	0.08	13.1	0.0	0.38	10.9	0.0	2.0	2	0	0	2	2	2	0	Acetyltransferase	(GNAT)	domain
Acetyltransf_6	PF13480.7	gi|289596326|ref|YP_003483022.1|	-	0.15	12.2	0.0	0.24	11.6	0.0	1.3	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
MTS	PF05175.14	gi|289596328|ref|YP_003483024.1|	-	4.6e-11	42.6	0.0	6.3e-11	42.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
PrmA	PF06325.13	gi|289596328|ref|YP_003483024.1|	-	7.3e-11	42.0	0.2	1.8e-10	40.7	0.1	1.6	1	1	1	2	2	2	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Cons_hypoth95	PF03602.15	gi|289596328|ref|YP_003483024.1|	-	3e-07	30.3	0.0	3.8e-07	29.9	0.0	1.1	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Met_10	PF02475.16	gi|289596328|ref|YP_003483024.1|	-	7.3e-05	22.6	0.1	0.0001	22.1	0.1	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_25	PF13649.6	gi|289596328|ref|YP_003483024.1|	-	8.7e-05	23.2	0.0	0.00016	22.3	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.18	gi|289596328|ref|YP_003483024.1|	-	0.00022	21.0	0.7	0.0015	18.2	0.7	2.3	1	1	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
DUF43	PF01861.16	gi|289596328|ref|YP_003483024.1|	-	0.0027	17.0	0.0	0.0039	16.5	0.0	1.3	1	1	0	1	1	1	1	Branched-chain	polyamine	synthase	A	C-terminal	domain
N6_Mtase	PF02384.16	gi|289596328|ref|YP_003483024.1|	-	0.011	15.0	0.6	0.11	11.7	0.6	2.1	1	1	0	1	1	1	0	N-6	DNA	Methylase
DNA_methylase	PF00145.17	gi|289596328|ref|YP_003483024.1|	-	0.015	14.7	0.0	0.025	13.9	0.0	1.2	1	0	0	1	1	1	0	C-5	cytosine-specific	DNA	methylase
Methyltransf_11	PF08241.12	gi|289596328|ref|YP_003483024.1|	-	0.03	14.9	0.0	0.068	13.8	0.0	1.7	1	1	0	1	1	1	0	Methyltransferase	domain
TMF_TATA_bd	PF12325.8	gi|289596329|ref|YP_003483025.1|	-	0.0057	16.9	2.3	0.0069	16.6	2.3	1.1	1	0	0	1	1	1	1	TATA	element	modulatory	factor	1	TATA	binding
bZIP_1	PF00170.21	gi|289596329|ref|YP_003483025.1|	-	0.01	15.9	1.0	0.014	15.5	1.0	1.1	1	0	0	1	1	1	0	bZIP	transcription	factor
Fib_alpha	PF08702.10	gi|289596329|ref|YP_003483025.1|	-	0.02	15.1	0.1	0.02	15.1	0.1	1.0	1	0	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
Wtap	PF17098.5	gi|289596329|ref|YP_003483025.1|	-	0.026	14.5	1.2	0.028	14.3	1.2	1.0	1	0	0	1	1	1	0	WTAP/Mum2p	family
REV1_C	PF16727.5	gi|289596329|ref|YP_003483025.1|	-	0.034	14.5	0.1	0.04	14.3	0.1	1.1	1	0	0	1	1	1	0	DNA	repair	protein	REV1	C-terminal	domain
Med9	PF07544.13	gi|289596329|ref|YP_003483025.1|	-	0.041	14.0	0.1	0.045	13.8	0.1	1.1	1	0	0	1	1	1	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
DUF16	PF01519.16	gi|289596329|ref|YP_003483025.1|	-	0.066	13.7	0.1	0.067	13.7	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF16
DivIC	PF04977.15	gi|289596329|ref|YP_003483025.1|	-	0.066	13.0	0.6	0.071	12.9	0.6	1.1	1	0	0	1	1	1	0	Septum	formation	initiator
ORC3_N	PF07034.11	gi|289596329|ref|YP_003483025.1|	-	0.08	12.0	0.2	0.083	12.0	0.2	1.1	1	0	0	1	1	1	0	Origin	recognition	complex	(ORC)	subunit	3	N-terminus
W2	PF02020.18	gi|289596329|ref|YP_003483025.1|	-	0.083	13.0	1.7	0.088	13.0	1.7	1.2	1	0	0	1	1	1	0	eIF4-gamma/eIF5/eIF2-epsilon
DUF4988	PF16378.5	gi|289596329|ref|YP_003483025.1|	-	0.1	12.2	0.7	0.12	12.0	0.7	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function
LSM	PF01423.22	gi|289596330|ref|YP_003483026.1|	-	5.2e-20	70.9	2.9	5.6e-20	70.8	2.9	1.0	1	0	0	1	1	1	1	LSM	domain
ATPase	PF06745.13	gi|289596331|ref|YP_003483027.1|	-	2e-16	60.0	0.1	2e-16	60.0	0.1	3.4	2	1	2	4	4	4	1	KaiC
PAXNEB	PF05625.11	gi|289596331|ref|YP_003483027.1|	-	1.8e-06	27.3	0.0	2.2e-05	23.8	0.0	2.4	1	1	1	2	2	2	1	PAXNEB	protein
zf-ribbon_3	PF13248.6	gi|289596331|ref|YP_003483027.1|	-	0.00051	19.3	2.3	0.00088	18.6	2.3	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
RecA	PF00154.21	gi|289596331|ref|YP_003483027.1|	-	0.0019	17.7	0.0	0.004	16.6	0.0	1.5	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
MEDS	PF14417.6	gi|289596331|ref|YP_003483027.1|	-	0.0054	16.6	0.1	0.033	14.0	0.0	2.4	2	0	0	2	2	2	1	MEDS:	MEthanogen/methylotroph,	DcmR	Sensory	domain
DZR	PF12773.7	gi|289596331|ref|YP_003483027.1|	-	0.0088	16.1	0.4	0.015	15.3	0.4	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
Prok-RING_1	PF14446.6	gi|289596331|ref|YP_003483027.1|	-	0.05	13.5	0.7	0.09	12.7	0.7	1.4	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
zf_Rg	PF17915.1	gi|289596331|ref|YP_003483027.1|	-	0.14	11.6	0.6	0.31	10.5	0.6	1.7	1	0	0	1	1	1	0	Reverse	gyrase	zinc	finger
TF_Zn_Ribbon	PF08271.12	gi|289596331|ref|YP_003483027.1|	-	0.14	11.7	3.0	0.48	10.0	2.9	2.0	1	1	0	1	1	1	0	TFIIB	zinc-binding
Baculo_PEP_C	PF04513.12	gi|289596331|ref|YP_003483027.1|	-	0.22	11.6	14.5	1.8	8.6	0.6	3.8	3	1	1	4	4	4	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Aida_N	PF08910.10	gi|289596331|ref|YP_003483027.1|	-	0.81	10.1	9.3	0.38	11.2	4.6	2.9	1	1	2	3	3	3	0	Aida	N-terminus
Spc7	PF08317.11	gi|289596331|ref|YP_003483027.1|	-	2.1	7.2	66.1	1.8	7.4	9.5	3.2	1	1	2	3	3	3	0	Spc7	kinetochore	protein
OrfB_Zn_ribbon	PF07282.11	gi|289596331|ref|YP_003483027.1|	-	2.1	8.3	4.8	0.94	9.5	0.8	2.4	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
MutS_III	PF05192.18	gi|289596331|ref|YP_003483027.1|	-	2.3	8.4	13.2	1.7e+02	2.3	12.9	2.5	1	1	0	1	1	1	0	MutS	domain	III
Golgin_A5	PF09787.9	gi|289596331|ref|YP_003483027.1|	-	4.9	6.5	55.5	1.6	8.1	17.9	2.5	1	1	1	2	2	2	0	Golgin	subfamily	A	member	5
Peptidase_M22	PF00814.25	gi|289596332|ref|YP_003483028.1|	-	1.2e-90	303.9	0.0	1.6e-90	303.5	0.0	1.2	1	0	0	1	1	1	1	Glycoprotease	family
RIO1	PF01163.22	gi|289596332|ref|YP_003483028.1|	-	3.4e-13	49.6	0.2	6.5e-13	48.7	0.2	1.4	1	0	0	1	1	1	1	RIO1	family
APH	PF01636.23	gi|289596332|ref|YP_003483028.1|	-	4.1e-09	36.7	0.4	0.00012	22.1	0.1	2.3	1	1	1	2	2	2	2	Phosphotransferase	enzyme	family
Kdo	PF06293.14	gi|289596332|ref|YP_003483028.1|	-	1e-07	31.5	0.4	2.8e-07	30.1	0.4	1.7	1	1	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
Pkinase	PF00069.25	gi|289596332|ref|YP_003483028.1|	-	1.2e-06	28.1	0.2	2e-06	27.4	0.2	1.3	1	0	0	1	1	1	1	Protein	kinase	domain
Choline_kinase	PF01633.20	gi|289596332|ref|YP_003483028.1|	-	0.0044	16.6	0.0	0.0069	16.0	0.0	1.3	1	0	0	1	1	1	1	Choline/ethanolamine	kinase
Carbam_trans_N	PF02543.15	gi|289596332|ref|YP_003483028.1|	-	0.0081	15.9	0.1	0.026	14.2	0.0	1.8	2	0	0	2	2	2	1	Carbamoyltransferase	N-terminus
WaaY	PF06176.11	gi|289596332|ref|YP_003483028.1|	-	0.015	14.9	0.4	0.025	14.2	0.4	1.3	1	0	0	1	1	1	0	Lipopolysaccharide	core	biosynthesis	protein	(WaaY)
BcrAD_BadFG	PF01869.20	gi|289596332|ref|YP_003483028.1|	-	0.071	12.6	0.1	0.13	11.7	0.1	1.6	1	1	0	1	1	1	0	BadF/BadG/BcrA/BcrD	ATPase	family
Pkinase_Tyr	PF07714.17	gi|289596332|ref|YP_003483028.1|	-	0.083	12.2	0.1	0.13	11.5	0.1	1.2	1	0	0	1	1	1	0	Protein	tyrosine	kinase
Ham1p_like	PF01725.16	gi|289596333|ref|YP_003483029.1|	-	9.5e-48	162.6	0.0	1.1e-47	162.4	0.0	1.0	1	0	0	1	1	1	1	Ham1	family
QueC	PF06508.13	gi|289596334|ref|YP_003483030.1|	-	9.9e-82	273.5	0.0	1.6e-81	272.9	0.0	1.3	2	0	0	2	2	2	1	Queuosine	biosynthesis	protein	QueC
Asn_synthase	PF00733.21	gi|289596334|ref|YP_003483030.1|	-	2.1e-10	40.8	0.0	2.8e-10	40.4	0.0	1.1	1	0	0	1	1	1	1	Asparagine	synthase
ThiI	PF02568.14	gi|289596334|ref|YP_003483030.1|	-	2.4e-06	27.3	0.1	0.00077	19.1	0.0	2.2	2	0	0	2	2	2	2	Thiamine	biosynthesis	protein	(ThiI)
PAPS_reduct	PF01507.19	gi|289596334|ref|YP_003483030.1|	-	0.00022	21.3	0.0	0.00059	19.9	0.0	1.7	1	1	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
ATP_bind_3	PF01171.20	gi|289596334|ref|YP_003483030.1|	-	0.00036	20.3	0.0	0.0021	17.9	0.0	1.9	2	0	0	2	2	2	1	PP-loop	family
NAD_synthase	PF02540.17	gi|289596334|ref|YP_003483030.1|	-	0.00045	19.4	0.0	0.002	17.3	0.0	1.9	2	0	0	2	2	2	1	NAD	synthase
tRNA_Me_trans	PF03054.16	gi|289596334|ref|YP_003483030.1|	-	0.00058	18.8	0.0	0.00087	18.2	0.0	1.2	1	0	0	1	1	1	1	tRNA	methyl	transferase
Arginosuc_synth	PF00764.19	gi|289596334|ref|YP_003483030.1|	-	0.0079	15.5	0.0	0.017	14.4	0.0	1.5	2	0	0	2	2	2	1	Arginosuccinate	synthase
Phage_portal	PF04860.12	gi|289596334|ref|YP_003483030.1|	-	0.079	12.1	0.0	0.11	11.7	0.0	1.2	1	0	0	1	1	1	0	Phage	portal	protein
PTPS	PF01242.19	gi|289596335|ref|YP_003483031.1|	-	1.4e-20	73.5	0.1	1.8e-20	73.1	0.1	1.1	1	0	0	1	1	1	1	6-pyruvoyl	tetrahydropterin	synthase
CheF-arch	PF04283.12	gi|289596336|ref|YP_003483032.1|	-	0.00077	19.3	0.3	0.003	17.3	0.0	2.0	2	1	1	3	3	3	1	Chemotaxis	signal	transduction	system	protein	F	from	archaea
GRAM	PF02893.20	gi|289596336|ref|YP_003483032.1|	-	0.028	14.3	0.0	0.07	13.0	0.0	1.7	2	0	0	2	2	2	0	GRAM	domain
Phage_integrase	PF00589.22	gi|289596337|ref|YP_003483033.1|	-	9.5e-51	172.0	0.1	1.4e-50	171.4	0.1	1.3	1	0	0	1	1	1	1	Phage	integrase	family
Phage_int_SAM_4	PF13495.6	gi|289596337|ref|YP_003483033.1|	-	5.9e-13	49.1	3.0	5.9e-13	49.1	3.0	2.3	3	0	0	3	3	3	1	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_1	PF02899.17	gi|289596337|ref|YP_003483033.1|	-	1.2e-08	35.1	3.4	1.5e-08	34.8	1.2	2.2	2	1	1	3	3	3	1	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_5	PF13102.6	gi|289596337|ref|YP_003483033.1|	-	1.8e-06	28.2	6.7	0.068	13.5	0.3	3.5	2	1	1	3	3	3	2	Phage	integrase	SAM-like	domain
Phage_integr_3	PF16795.5	gi|289596337|ref|YP_003483033.1|	-	0.0031	17.4	6.6	0.012	15.6	0.7	3.2	2	2	0	2	2	2	1	Archaeal	phage	integrase
PYRIN	PF02758.16	gi|289596337|ref|YP_003483033.1|	-	0.18	12.0	0.5	2	8.6	0.2	2.5	2	1	1	3	3	3	0	PAAD/DAPIN/Pyrin	domain
FAD_binding_3	PF01494.19	gi|289596338|ref|YP_003483034.1|	-	2.1e-11	43.7	0.2	2.9e-08	33.3	0.1	3.0	2	1	0	2	2	2	2	FAD	binding	domain
DAO	PF01266.24	gi|289596338|ref|YP_003483034.1|	-	4.7e-06	26.4	0.7	0.0071	16.0	0.2	2.2	1	1	0	2	2	2	2	FAD	dependent	oxidoreductase
Pyr_redox_3	PF13738.6	gi|289596338|ref|YP_003483034.1|	-	0.00053	19.3	5.4	0.17	11.1	0.1	2.5	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|289596338|ref|YP_003483034.1|	-	0.00063	20.3	0.7	0.063	13.8	0.1	2.9	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.12	gi|289596338|ref|YP_003483034.1|	-	0.0014	17.8	0.0	0.036	13.1	0.0	2.0	2	0	0	2	2	2	1	Lycopene	cyclase	protein
Pyr_redox_2	PF07992.14	gi|289596338|ref|YP_003483034.1|	-	0.0014	17.9	2.7	0.039	13.2	0.0	3.3	3	1	1	4	4	4	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.14	gi|289596338|ref|YP_003483034.1|	-	0.0017	17.1	0.3	0.0094	14.7	0.0	2.1	2	0	0	2	2	2	1	HI0933-like	protein
NAD_binding_8	PF13450.6	gi|289596338|ref|YP_003483034.1|	-	0.002	18.3	0.0	0.0048	17.1	0.0	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.17	gi|289596338|ref|YP_003483034.1|	-	0.025	13.8	0.1	0.055	12.7	0.1	1.6	1	0	0	1	1	1	0	Thi4	family
3HCDH_N	PF02737.18	gi|289596338|ref|YP_003483034.1|	-	0.038	13.9	0.1	0.089	12.7	0.0	1.7	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
FbpA	PF05833.11	gi|289596339|ref|YP_003483035.1|	-	6.9e-55	186.6	7.0	1e-54	186.0	7.0	1.2	1	0	0	1	1	1	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
NFACT-R_1	PF05670.13	gi|289596339|ref|YP_003483035.1|	-	4e-29	101.4	0.1	8.8e-29	100.4	0.1	1.6	1	0	0	1	1	1	1	NFACT	protein	RNA	binding	domain
sCache_2	PF17200.4	gi|289596339|ref|YP_003483035.1|	-	0.016	15.1	0.6	0.042	13.7	0.2	1.8	1	1	1	2	2	2	0	Single	Cache	domain	2
Fez1	PF06818.15	gi|289596339|ref|YP_003483035.1|	-	0.1	13.1	11.9	0.21	12.0	11.9	1.5	1	0	0	1	1	1	0	Fez1
Prefoldin	PF02996.17	gi|289596339|ref|YP_003483035.1|	-	0.2	11.6	9.4	1.9	8.4	0.3	3.3	3	0	0	3	3	3	0	Prefoldin	subunit
Nmad5	PF18757.1	gi|289596339|ref|YP_003483035.1|	-	0.39	10.9	9.9	0.33	11.1	7.3	2.2	2	1	0	2	2	2	0	Nucleotide	modification	associated	domain	5
DUF4407	PF14362.6	gi|289596339|ref|YP_003483035.1|	-	0.55	9.5	3.6	1.1	8.5	3.6	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
DUF2229	PF09989.9	gi|289596339|ref|YP_003483035.1|	-	1.4	8.5	4.1	1.6	8.3	2.7	1.7	1	1	0	1	1	1	0	CoA	enzyme	activase	uncharacterised	domain	(DUF2229)
DUF4446	PF14584.6	gi|289596339|ref|YP_003483035.1|	-	5.4	7.0	7.2	5.9	6.9	1.1	2.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF4446)
DUF4337	PF14235.6	gi|289596339|ref|YP_003483035.1|	-	9.2	6.4	7.5	1.2	9.3	1.0	2.5	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4337)
HTH_24	PF13412.6	gi|289596340|ref|YP_003483036.1|	-	1.6e-17	62.8	1.4	1.6e-17	62.8	1.4	2.3	3	0	0	3	3	3	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.6	gi|289596340|ref|YP_003483036.1|	-	1.1e-14	53.9	1.6	2e-14	53.1	1.6	1.5	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
AsnC_trans_reg	PF01037.21	gi|289596340|ref|YP_003483036.1|	-	1.2e-11	44.4	0.2	2e-11	43.7	0.2	1.4	1	0	0	1	1	1	1	Lrp/AsnC	ligand	binding	domain
HTH_11	PF08279.12	gi|289596340|ref|YP_003483036.1|	-	1.2e-08	34.7	0.2	3.9e-08	33.1	0.2	1.9	1	0	0	1	1	1	1	HTH	domain
HTH_DeoR	PF08220.12	gi|289596340|ref|YP_003483036.1|	-	4.4e-07	29.5	0.0	1e-06	28.3	0.0	1.6	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
MarR	PF01047.22	gi|289596340|ref|YP_003483036.1|	-	6.4e-07	29.2	0.1	1.8e-06	27.8	0.1	1.7	1	0	0	1	1	1	1	MarR	family
HTH_5	PF01022.20	gi|289596340|ref|YP_003483036.1|	-	2e-05	24.3	0.4	5.9e-05	22.8	0.4	1.7	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.7	gi|289596340|ref|YP_003483036.1|	-	2.3e-05	24.4	0.1	5.4e-05	23.2	0.1	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_36	PF13730.6	gi|289596340|ref|YP_003483036.1|	-	2.8e-05	24.0	0.1	7.8e-05	22.5	0.1	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_Crp_2	PF13545.6	gi|289596340|ref|YP_003483036.1|	-	5.1e-05	23.2	0.1	0.00028	20.8	0.1	2.1	2	0	0	2	2	2	1	Crp-like	helix-turn-helix	domain
HTH_23	PF13384.6	gi|289596340|ref|YP_003483036.1|	-	5.2e-05	22.9	0.2	0.00013	21.6	0.1	1.8	2	0	0	2	2	1	1	Homeodomain-like	domain
MarR_2	PF12802.7	gi|289596340|ref|YP_003483036.1|	-	6.1e-05	22.8	0.1	0.00013	21.8	0.1	1.5	1	0	0	1	1	1	1	MarR	family
RepL	PF05732.11	gi|289596340|ref|YP_003483036.1|	-	0.00019	20.9	0.4	0.0027	17.1	0.0	2.0	1	1	0	2	2	2	1	Firmicute	plasmid	replication	protein	(RepL)
HTH_IclR	PF09339.10	gi|289596340|ref|YP_003483036.1|	-	0.0011	18.7	0.0	0.0019	18.0	0.0	1.4	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_28	PF13518.6	gi|289596340|ref|YP_003483036.1|	-	0.0012	18.9	0.1	0.0044	17.1	0.1	1.9	2	0	0	2	2	2	1	Helix-turn-helix	domain
GntR	PF00392.21	gi|289596340|ref|YP_003483036.1|	-	0.0015	18.1	0.2	0.0033	17.0	0.2	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
Fe_dep_repress	PF01325.19	gi|289596340|ref|YP_003483036.1|	-	0.0018	18.4	0.3	0.0037	17.4	0.0	1.7	2	0	0	2	2	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_39	PF14090.6	gi|289596340|ref|YP_003483036.1|	-	0.0029	17.3	0.1	0.0062	16.3	0.1	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.12	gi|289596340|ref|YP_003483036.1|	-	0.0052	16.4	0.2	0.036	13.8	0.0	2.2	2	0	0	2	2	2	1	Sigma-70,	region	4
TrmB	PF01978.19	gi|289596340|ref|YP_003483036.1|	-	0.006	16.4	0.2	0.02	14.8	0.2	1.9	1	1	1	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_Mga	PF08280.11	gi|289596340|ref|YP_003483036.1|	-	0.0068	16.4	2.0	0.23	11.5	0.1	2.6	3	0	0	3	3	2	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_6	PF01418.17	gi|289596340|ref|YP_003483036.1|	-	0.0089	16.0	0.0	0.021	14.8	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain,	rpiR	family
HTH_10	PF04967.12	gi|289596340|ref|YP_003483036.1|	-	0.0095	15.7	0.3	0.022	14.6	0.1	1.6	2	0	0	2	2	1	1	HTH	DNA	binding	domain
HTH_29	PF13551.6	gi|289596340|ref|YP_003483036.1|	-	0.0097	15.9	0.0	0.019	15.0	0.0	1.5	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_12	PF08461.10	gi|289596340|ref|YP_003483036.1|	-	0.011	15.7	1.4	0.014	15.3	0.2	1.9	2	0	0	2	2	1	0	Ribonuclease	R	winged-helix	domain
Rrf2	PF02082.20	gi|289596340|ref|YP_003483036.1|	-	0.013	15.9	0.3	0.053	13.9	0.1	2.0	2	0	0	2	2	2	0	Transcriptional	regulator
Sigma70_r4	PF04545.16	gi|289596340|ref|YP_003483036.1|	-	0.019	14.5	0.2	0.049	13.1	0.1	1.7	2	0	0	2	2	1	0	Sigma-70,	region	4
HTH_3	PF01381.22	gi|289596340|ref|YP_003483036.1|	-	0.02	14.9	1.0	0.035	14.2	0.2	1.8	2	0	0	2	2	1	0	Helix-turn-helix
Put_DNA-bind_N	PF06971.13	gi|289596340|ref|YP_003483036.1|	-	0.02	14.9	1.7	0.045	13.8	0.1	2.2	2	0	0	2	2	2	0	Putative	DNA-binding	protein	N-terminus
HTH_31	PF13560.6	gi|289596340|ref|YP_003483036.1|	-	0.025	14.9	0.3	0.043	14.2	0.3	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
DUF1670	PF07900.11	gi|289596340|ref|YP_003483036.1|	-	0.029	13.7	0.1	0.07	12.5	0.1	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1670)
HTH_50	PF18024.1	gi|289596340|ref|YP_003483036.1|	-	0.033	13.8	0.0	0.079	12.6	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
Sigma70_ECF	PF07638.11	gi|289596340|ref|YP_003483036.1|	-	0.033	14.1	0.0	0.062	13.2	0.0	1.4	1	0	0	1	1	1	0	ECF	sigma	factor
RP-C	PF03428.13	gi|289596340|ref|YP_003483036.1|	-	0.036	13.7	0.0	0.063	12.9	0.0	1.5	1	0	0	1	1	1	0	Replication	protein	C	N-terminal	domain
HTH_17	PF12728.7	gi|289596340|ref|YP_003483036.1|	-	0.049	13.8	0.4	0.16	12.2	0.2	2.1	2	1	0	2	2	1	0	Helix-turn-helix	domain
Mga	PF05043.13	gi|289596340|ref|YP_003483036.1|	-	0.062	13.9	0.1	0.48	11.0	0.0	2.2	2	1	0	2	2	2	0	Mga	helix-turn-helix	domain
FeoC	PF09012.10	gi|289596340|ref|YP_003483036.1|	-	0.069	13.2	0.0	0.13	12.3	0.0	1.5	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
HTH_Tnp_ISL3	PF13542.6	gi|289596340|ref|YP_003483036.1|	-	0.081	12.3	0.0	0.17	11.3	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	transposase	family	ISL3
Phage_rep_O	PF04492.13	gi|289596340|ref|YP_003483036.1|	-	0.099	13.2	0.5	2	9.1	0.1	2.3	1	1	1	2	2	2	0	Bacteriophage	replication	protein	O
HTH_34	PF13601.6	gi|289596340|ref|YP_003483036.1|	-	0.14	12.4	1.0	0.5	10.6	0.1	2.2	3	0	0	3	3	2	0	Winged	helix	DNA-binding	domain
RPA_C	PF08784.11	gi|289596340|ref|YP_003483036.1|	-	0.16	12.7	0.1	0.88	10.3	0.0	2.0	2	0	0	2	2	2	0	Replication	protein	A	C	terminal
Crp	PF00325.20	gi|289596340|ref|YP_003483036.1|	-	0.42	10.3	2.0	0.51	10.0	0.2	2.0	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	crp	family
MNHE	PF01899.16	gi|289596341|ref|YP_003483037.1|	-	1.9e-41	141.3	0.1	2.1e-41	141.1	0.1	1.1	1	0	0	1	1	1	1	Na+/H+	ion	antiporter	subunit
Caps_synth_CapC	PF14102.6	gi|289596341|ref|YP_003483037.1|	-	0.11	12.9	5.0	0.2	12.1	5.0	1.4	1	0	0	1	1	1	0	Capsule	biosynthesis	CapC
DUF5090	PF17009.5	gi|289596341|ref|YP_003483037.1|	-	0.94	9.4	4.1	1.2	9.1	4.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5090)
DUF4199	PF13858.6	gi|289596341|ref|YP_003483037.1|	-	3.5	8.0	11.1	5.4	7.4	11.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4199)
MrpF_PhaF	PF04066.13	gi|289596342|ref|YP_003483038.1|	-	5.5e-22	77.9	6.0	5.5e-22	77.9	6.0	1.8	2	0	0	2	2	2	1	Multiple	resistance	and	pH	regulation	protein	F	(MrpF	/	PhaF)
DUF2070	PF09843.9	gi|289596342|ref|YP_003483038.1|	-	9.8	4.3	10.5	11	4.1	10.5	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
PhaG_MnhG_YufB	PF03334.14	gi|289596343|ref|YP_003483039.1|	-	2.4e-25	88.6	10.7	2.9e-25	88.3	10.7	1.1	1	0	0	1	1	1	1	Na+/H+	antiporter	subunit
DUF4040	PF13244.6	gi|289596344|ref|YP_003483040.1|	-	2e-20	72.7	5.3	2.4e-20	72.4	5.3	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4040)
DUF2106	PF09879.9	gi|289596345|ref|YP_003483041.1|	-	0.017	14.7	0.1	0.017	14.7	0.1	1.4	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2106)
MnhB	PF04039.13	gi|289596346|ref|YP_003483042.1|	-	2.8e-27	95.5	12.5	3.6e-27	95.1	12.5	1.1	1	0	0	1	1	1	1	Domain	related	to	MnhB	subunit	of	Na+/H+	antiporter
DUF2105	PF09878.9	gi|289596346|ref|YP_003483042.1|	-	0.027	14.2	4.8	0.039	13.7	4.8	1.2	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2105)
Oxidored_q2	PF00420.24	gi|289596347|ref|YP_003483043.1|	-	3.1e-30	103.9	5.6	3.7e-30	103.7	5.6	1.0	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
DUF2108	PF09881.9	gi|289596347|ref|YP_003483043.1|	-	0.00016	21.6	3.0	0.00016	21.6	3.0	1.9	2	0	0	2	2	2	1	Predicted	membrane	protein	(DUF2108)
Trp_oprn_chp	PF09534.10	gi|289596347|ref|YP_003483043.1|	-	0.033	14.0	0.3	0.041	13.7	0.3	1.1	1	0	0	1	1	1	0	Tryptophan-associated	transmembrane	protein	(Trp_oprn_chp)
CDP-OH_P_transf	PF01066.21	gi|289596347|ref|YP_003483043.1|	-	0.3	11.9	0.1	0.3	11.9	0.1	2.1	2	1	0	2	2	2	0	CDP-alcohol	phosphatidyltransferase
Proton_antipo_M	PF00361.20	gi|289596348|ref|YP_003483044.1|	-	8e-54	182.8	31.1	8e-54	182.8	31.1	2.6	1	1	1	2	2	2	1	Proton-conducting	membrane	transporter
Proton_antipo_N	PF00662.20	gi|289596348|ref|YP_003483044.1|	-	0.00032	20.7	0.1	0.00032	20.7	0.1	3.6	4	0	0	4	4	4	1	NADH-Ubiquinone	oxidoreductase	(complex	I),	chain	5	N-terminus
PepSY_TM	PF03929.16	gi|289596349|ref|YP_003483045.1|	-	0.067	12.8	0.2	0.067	12.8	0.2	1.8	1	1	1	2	2	2	0	PepSY-associated	TM	region
MaAIMP_sms	PF16951.5	gi|289596349|ref|YP_003483045.1|	-	2.1	8.1	5.3	9	6.1	0.0	2.2	2	0	0	2	2	2	0	Putative	methionine	and	alanine	importer,	small	subunit
FixQ	PF05545.11	gi|289596349|ref|YP_003483045.1|	-	3.2	7.8	11.8	0.15	12.0	3.2	2.4	2	0	0	2	2	2	0	Cbb3-type	cytochrome	oxidase	component	FixQ
Oxidored_q6	PF01058.22	gi|289596350|ref|YP_003483046.1|	-	3.6e-30	104.5	0.1	4.2e-30	104.2	0.1	1.0	1	0	0	1	1	1	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
Complex1_30kDa	PF00329.19	gi|289596351|ref|YP_003483047.1|	-	3.7e-22	79.2	0.1	5e-22	78.8	0.1	1.1	1	0	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase,	30	Kd	subunit
Complex1_49kDa	PF00346.19	gi|289596352|ref|YP_003483048.1|	-	6.7e-67	225.4	0.1	3.7e-65	219.7	0.1	2.1	1	1	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase,	49	Kd	subunit
NiFeSe_Hases	PF00374.19	gi|289596352|ref|YP_003483048.1|	-	4.6e-21	75.3	1.7	1.2e-14	54.2	0.2	3.7	4	0	0	4	4	4	3	Nickel-dependent	hydrogenase
NADHdh	PF00146.21	gi|289596353|ref|YP_003483049.1|	-	2e-69	234.2	24.4	2.3e-69	234.0	24.4	1.0	1	0	0	1	1	1	1	NADH	dehydrogenase
Fer4	PF00037.27	gi|289596354|ref|YP_003483050.1|	-	5.5e-15	54.5	15.8	2.7e-08	33.3	2.8	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|289596354|ref|YP_003483050.1|	-	3.6e-14	53.1	37.6	6.9e-08	33.0	16.4	2.2	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|289596354|ref|YP_003483050.1|	-	5.9e-13	48.8	19.2	1e-09	38.4	11.2	1.6	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|289596354|ref|YP_003483050.1|	-	2.4e-11	44.4	20.2	5.6e-09	36.8	10.3	2.1	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_10	PF13237.6	gi|289596354|ref|YP_003483050.1|	-	1.8e-09	37.6	22.7	3.5e-08	33.4	11.6	1.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|289596354|ref|YP_003483050.1|	-	2.2e-09	37.3	11.0	9e-06	25.7	0.6	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|289596354|ref|YP_003483050.1|	-	1.8e-08	34.8	19.8	6.2e-06	26.7	11.4	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|289596354|ref|YP_003483050.1|	-	3.7e-08	33.0	10.2	7.4e-05	22.6	1.4	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|289596354|ref|YP_003483050.1|	-	8e-08	32.6	20.8	6.3e-06	26.5	11.7	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|289596354|ref|YP_003483050.1|	-	7.3e-06	25.8	17.3	0.00016	21.6	2.2	2.6	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_22	PF17179.4	gi|289596354|ref|YP_003483050.1|	-	1.7e-05	25.6	7.6	0.02	15.7	1.0	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|289596354|ref|YP_003483050.1|	-	6.4e-05	23.6	8.1	0.016	16.0	1.0	2.4	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.6	gi|289596354|ref|YP_003483050.1|	-	0.00038	20.9	8.9	0.021	15.3	1.3	2.3	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_4	PF12800.7	gi|289596354|ref|YP_003483050.1|	-	0.00039	20.7	18.5	0.019	15.4	1.5	2.5	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_3	PF12798.7	gi|289596354|ref|YP_003483050.1|	-	0.00042	21.1	28.8	0.0062	17.4	7.6	2.6	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|289596354|ref|YP_003483050.1|	-	0.0042	17.3	13.7	0.058	13.6	2.5	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
ParA	PF10609.9	gi|289596355|ref|YP_003483051.1|	-	3.7e-53	180.5	1.1	4.7e-52	176.9	1.1	1.9	1	1	0	1	1	1	1	NUBPL	iron-transfer	P-loop	NTPase
CbiA	PF01656.23	gi|289596355|ref|YP_003483051.1|	-	2.2e-14	53.6	0.0	3.5e-14	53.0	0.0	1.3	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.6	gi|289596355|ref|YP_003483051.1|	-	5.1e-09	36.3	0.4	3.5e-07	30.3	0.4	2.3	1	1	0	1	1	1	1	AAA	domain
MipZ	PF09140.11	gi|289596355|ref|YP_003483051.1|	-	4.3e-06	26.2	0.0	6.8e-06	25.6	0.0	1.3	1	0	0	1	1	1	1	ATPase	MipZ
Fer4_NifH	PF00142.18	gi|289596355|ref|YP_003483051.1|	-	6.6e-06	25.8	0.2	0.0012	18.3	0.0	2.1	2	0	0	2	2	2	2	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
ArsA_ATPase	PF02374.15	gi|289596355|ref|YP_003483051.1|	-	9.6e-06	25.0	3.8	0.00053	19.3	0.7	2.3	1	1	1	2	2	2	2	Anion-transporting	ATPase
AAA_26	PF13500.6	gi|289596355|ref|YP_003483051.1|	-	0.00024	21.0	1.5	0.077	12.8	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
HypA	PF01155.19	gi|289596356|ref|YP_003483052.1|	-	1.7e-29	102.1	0.6	1.9e-29	101.9	0.6	1.0	1	0	0	1	1	1	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
TFIIS_C	PF01096.18	gi|289596356|ref|YP_003483052.1|	-	0.00062	19.6	2.6	0.093	12.6	0.5	2.2	2	0	0	2	2	2	2	Transcription	factor	S-II	(TFIIS)
TackOD1	PF18551.1	gi|289596356|ref|YP_003483052.1|	-	0.0013	18.4	1.0	0.12	12.1	0.1	2.1	1	1	1	2	2	2	1	Thaumarchaeal	output	domain	1
Zn_Tnp_IS1595	PF12760.7	gi|289596356|ref|YP_003483052.1|	-	0.0027	17.7	0.8	0.46	10.5	0.1	2.2	2	0	0	2	2	2	1	Transposase	zinc-ribbon	domain
Lar_restr_allev	PF14354.6	gi|289596356|ref|YP_003483052.1|	-	0.0039	17.5	0.1	0.75	10.2	0.0	2.3	2	0	0	2	2	2	1	Restriction	alleviation	protein	Lar
TF_Zn_Ribbon	PF08271.12	gi|289596356|ref|YP_003483052.1|	-	0.0048	16.4	0.4	0.49	10.0	0.1	2.4	2	0	0	2	2	2	1	TFIIB	zinc-binding
zinc_ribbon_5	PF13719.6	gi|289596356|ref|YP_003483052.1|	-	0.0093	15.7	0.6	1.6	8.6	0.0	2.3	2	0	0	2	2	2	1	zinc-ribbon	domain
DNA_RNApol_7kD	PF03604.13	gi|289596356|ref|YP_003483052.1|	-	0.0096	15.6	0.4	0.81	9.4	0.0	2.3	2	0	0	2	2	2	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
DUF4379	PF14311.6	gi|289596356|ref|YP_003483052.1|	-	0.0098	16.2	2.1	0.031	14.6	2.1	1.9	1	1	0	1	1	1	1	Probable	Zinc-ribbon	domain
zinc_ribbon_4	PF13717.6	gi|289596356|ref|YP_003483052.1|	-	0.014	15.3	1.5	0.68	9.9	0.1	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
UPF0547	PF10571.9	gi|289596356|ref|YP_003483052.1|	-	0.025	14.7	2.5	0.41	10.8	0.1	2.4	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
Sortilin-Vps10	PF15902.5	gi|289596356|ref|YP_003483052.1|	-	0.026	13.3	0.0	0.031	13.1	0.0	1.2	1	0	0	1	1	1	0	Sortilin,	neurotensin	receptor	3,
eIF-5_eIF-2B	PF01873.17	gi|289596356|ref|YP_003483052.1|	-	0.041	13.7	1.6	1.1	9.1	0.0	2.7	2	1	1	3	3	3	0	Domain	found	in	IF2B/IF5
PhnA_Zn_Ribbon	PF08274.12	gi|289596356|ref|YP_003483052.1|	-	0.043	13.8	0.2	11	6.1	0.0	2.4	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
zf-ZPR1	PF03367.13	gi|289596356|ref|YP_003483052.1|	-	0.078	12.8	2.9	0.22	11.3	1.2	2.3	1	1	1	2	2	2	0	ZPR1	zinc-finger	domain
Zn-ribbon_8	PF09723.10	gi|289596356|ref|YP_003483052.1|	-	0.081	13.1	4.4	2.2	8.5	4.4	2.3	1	1	0	1	1	1	0	Zinc	ribbon	domain
DUF2387	PF09526.10	gi|289596356|ref|YP_003483052.1|	-	0.082	13.1	0.6	5.2	7.3	0.2	2.5	2	0	0	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
Cytochrom_CIII	PF02085.16	gi|289596356|ref|YP_003483052.1|	-	0.085	13.2	0.9	0.15	12.4	0.9	1.5	1	1	0	1	1	1	0	Class	III	cytochrome	C	family
Zn_Tnp_IS1	PF03811.13	gi|289596356|ref|YP_003483052.1|	-	0.16	11.7	1.4	2.9	7.7	0.0	2.2	2	0	0	2	2	2	0	InsA	N-terminal	domain
DUF35_N	PF12172.8	gi|289596356|ref|YP_003483052.1|	-	0.18	11.7	6.6	0.48	10.3	0.3	2.4	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-ACC	PF17848.1	gi|289596356|ref|YP_003483052.1|	-	0.19	11.8	3.2	4.9	7.3	0.2	2.4	2	0	0	2	2	2	0	Acetyl-coA	carboxylase	zinc	finger	domain
zinc_ribbon_2	PF13240.6	gi|289596356|ref|YP_003483052.1|	-	0.21	11.4	3.1	4.2	7.2	0.3	2.6	2	0	0	2	2	2	0	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.11	gi|289596356|ref|YP_003483052.1|	-	0.4	10.6	2.1	17	5.4	0.3	2.2	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
AIRS_C	PF02769.22	gi|289596357|ref|YP_003483053.1|	-	2.1e-31	109.2	0.3	2.8e-31	108.8	0.3	1.2	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.24	gi|289596357|ref|YP_003483053.1|	-	1.7e-14	54.2	0.2	3.8e-14	53.1	0.2	1.5	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
Sua5_yciO_yrdC	PF01300.18	gi|289596358|ref|YP_003483054.1|	-	3.8e-46	156.8	0.0	7.3e-46	155.9	0.0	1.5	1	0	0	1	1	1	1	Telomere	recombination
zf-HYPF	PF07503.12	gi|289596358|ref|YP_003483054.1|	-	7.1e-34	115.3	17.0	1.9e-17	62.7	2.7	2.4	2	0	0	2	2	2	2	HypF	finger
HypF_C	PF17788.1	gi|289596358|ref|YP_003483054.1|	-	1.7e-25	89.7	0.0	4.3e-25	88.4	0.0	1.7	1	0	0	1	1	1	1	HypF	Kae1-like	domain
Acylphosphatase	PF00708.18	gi|289596358|ref|YP_003483054.1|	-	1.8e-23	82.8	0.0	4.5e-23	81.5	0.0	1.8	1	0	0	1	1	1	1	Acylphosphatase
Peptidase_M22	PF00814.25	gi|289596358|ref|YP_003483054.1|	-	4.8e-07	29.7	0.1	3.1e-06	27.1	0.0	2.0	2	0	0	2	2	2	1	Glycoprotease	family
Carbam_trans_N	PF02543.15	gi|289596358|ref|YP_003483054.1|	-	0.0022	17.7	0.0	0.025	14.2	0.0	2.2	2	0	0	2	2	2	1	Carbamoyltransferase	N-terminus
DZR	PF12773.7	gi|289596358|ref|YP_003483054.1|	-	0.013	15.5	4.9	2.9	8.0	0.1	2.3	2	0	0	2	2	2	0	Double	zinc	ribbon
Zn-ribbon_8	PF09723.10	gi|289596358|ref|YP_003483054.1|	-	0.42	10.8	9.7	1	9.5	3.9	2.9	3	0	0	3	3	3	0	Zinc	ribbon	domain
Lar_restr_allev	PF14354.6	gi|289596358|ref|YP_003483054.1|	-	0.47	10.9	4.5	7	7.1	2.0	2.5	2	0	0	2	2	2	0	Restriction	alleviation	protein	Lar
zinc_ribbon_15	PF17032.5	gi|289596358|ref|YP_003483054.1|	-	2.3	9.0	5.9	14	6.5	6.1	2.3	1	1	0	1	1	1	0	zinc-ribbon	family
NMD3	PF04981.13	gi|289596358|ref|YP_003483054.1|	-	5.3	6.4	7.4	2.2	7.7	0.2	2.3	1	1	0	2	2	2	0	NMD3	family
HypD	PF01924.16	gi|289596359|ref|YP_003483055.1|	-	2.6e-136	454.3	0.0	3e-136	454.1	0.0	1.0	1	0	0	1	1	1	1	Hydrogenase	formation	hypA	family
Thioredoxin_3	PF13192.6	gi|289596359|ref|YP_003483055.1|	-	0.065	13.3	0.1	2	8.5	0.0	2.6	2	0	0	2	2	2	0	Thioredoxin	domain
zf-RING_6	PF14835.6	gi|289596359|ref|YP_003483055.1|	-	0.52	10.2	0.1	0.52	10.2	0.1	2.2	2	0	0	2	2	2	0	zf-RING	of	BARD1-type	protein
HupF_HypC	PF01455.18	gi|289596360|ref|YP_003483056.1|	-	1.2e-27	95.8	0.2	1.4e-27	95.6	0.2	1.0	1	0	0	1	1	1	1	HupF/HypC	family
HTH_5	PF01022.20	gi|289596361|ref|YP_003483057.1|	-	7.7e-15	54.5	0.3	1.3e-14	53.8	0.3	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.7	gi|289596361|ref|YP_003483057.1|	-	1.8e-07	31.1	0.0	2.8e-07	30.5	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_34	PF13601.6	gi|289596361|ref|YP_003483057.1|	-	1.7e-05	24.9	0.4	3.9e-05	23.7	0.4	1.7	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_24	PF13412.6	gi|289596361|ref|YP_003483057.1|	-	0.00048	19.6	0.5	0.0083	15.7	0.0	2.3	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
DUF2513	PF10711.9	gi|289596361|ref|YP_003483057.1|	-	0.00093	19.5	0.1	0.0016	18.7	0.1	1.6	1	0	0	1	1	1	1	Hypothetical	protein	(DUF2513)
HTH_45	PF14947.6	gi|289596361|ref|YP_003483057.1|	-	0.0046	16.9	0.7	0.008	16.1	0.7	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix
TrmB	PF01978.19	gi|289596361|ref|YP_003483057.1|	-	0.023	14.6	0.0	0.044	13.7	0.0	1.5	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
RepL	PF05732.11	gi|289596361|ref|YP_003483057.1|	-	0.023	14.2	0.0	0.03	13.7	0.0	1.2	1	0	0	1	1	1	0	Firmicute	plasmid	replication	protein	(RepL)
DUF4364	PF14277.6	gi|289596361|ref|YP_003483057.1|	-	0.031	14.0	0.8	0.1	12.3	0.1	2.0	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF4364)
RP-C	PF03428.13	gi|289596361|ref|YP_003483057.1|	-	0.14	11.8	0.0	0.19	11.4	0.0	1.2	1	0	0	1	1	1	0	Replication	protein	C	N-terminal	domain
HTH_Crp_2	PF13545.6	gi|289596361|ref|YP_003483057.1|	-	0.17	11.9	0.0	0.26	11.3	0.0	1.3	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
MarR_2	PF12802.7	gi|289596361|ref|YP_003483057.1|	-	0.24	11.3	0.0	0.38	10.7	0.0	1.4	1	0	0	1	1	1	0	MarR	family
Fer4	PF00037.27	gi|289596362|ref|YP_003483058.1|	-	2.5e-09	36.6	14.8	2e-05	24.2	4.3	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|289596362|ref|YP_003483058.1|	-	3.5e-09	37.1	17.9	9.8e-07	29.3	7.8	2.3	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|289596362|ref|YP_003483058.1|	-	1.5e-08	34.6	6.8	2.6e-08	33.9	6.8	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|289596362|ref|YP_003483058.1|	-	4.3e-07	30.0	6.6	8.5e-07	29.0	6.6	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|289596362|ref|YP_003483058.1|	-	5.7e-07	30.4	5.8	0.00011	23.1	0.8	2.4	2	1	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_6	PF12837.7	gi|289596362|ref|YP_003483058.1|	-	2e-06	27.6	13.4	2.2e-05	24.3	2.7	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|289596362|ref|YP_003483058.1|	-	1.7e-05	24.6	13.2	0.00074	19.5	2.5	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|289596362|ref|YP_003483058.1|	-	9.5e-05	22.4	9.4	0.015	15.4	10.7	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|289596362|ref|YP_003483058.1|	-	0.0063	16.9	8.8	0.1	13.1	0.4	2.3	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|289596362|ref|YP_003483058.1|	-	0.0075	17.0	5.1	0.083	13.6	0.6	2.6	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_4	PF12800.7	gi|289596362|ref|YP_003483058.1|	-	0.01	16.3	12.1	0.4	11.3	2.9	2.2	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_17	PF13534.6	gi|289596362|ref|YP_003483058.1|	-	0.019	15.5	9.0	1.1	9.8	1.6	2.6	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|289596362|ref|YP_003483058.1|	-	0.023	15.5	11.0	0.044	14.6	0.2	2.7	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|289596362|ref|YP_003483058.1|	-	0.1	13.6	18.8	1.3	10.1	6.1	2.2	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|289596362|ref|YP_003483058.1|	-	0.34	11.5	10.9	22	5.7	10.9	2.5	1	1	0	1	1	1	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Oxidored_FMN	PF00724.20	gi|289596363|ref|YP_003483059.1|	-	1.1e-51	176.2	0.0	1.2e-33	116.8	0.0	2.6	2	1	1	3	3	3	2	NADH:flavin	oxidoreductase	/	NADH	oxidase	family
Pyr_redox_2	PF07992.14	gi|289596363|ref|YP_003483059.1|	-	3.6e-26	92.1	2.2	1.3e-25	90.3	1.0	2.3	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|289596363|ref|YP_003483059.1|	-	2.2e-16	60.2	8.0	9.5e-11	42.1	2.3	3.4	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|289596363|ref|YP_003483059.1|	-	6.8e-08	32.1	0.0	0.0047	16.2	0.0	2.8	2	1	1	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.24	gi|289596363|ref|YP_003483059.1|	-	4.4e-06	26.5	5.8	0.037	13.6	0.1	3.9	3	1	1	4	4	4	2	FAD	dependent	oxidoreductase
GIDA	PF01134.22	gi|289596363|ref|YP_003483059.1|	-	1.2e-05	24.6	0.3	0.0025	17.0	0.1	2.7	3	0	0	3	3	3	1	Glucose	inhibited	division	protein	A
NAD_binding_7	PF13241.6	gi|289596363|ref|YP_003483059.1|	-	2.3e-05	24.8	0.3	0.11	12.9	0.2	2.5	2	0	0	2	2	2	2	Putative	NAD(P)-binding
AlaDh_PNT_C	PF01262.21	gi|289596363|ref|YP_003483059.1|	-	3.9e-05	23.0	1.1	0.19	11.0	1.2	2.2	2	0	0	2	2	2	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
HI0933_like	PF03486.14	gi|289596363|ref|YP_003483059.1|	-	0.00035	19.4	6.5	0.044	12.5	0.1	3.2	3	0	0	3	3	3	2	HI0933-like	protein
FAD_oxidored	PF12831.7	gi|289596363|ref|YP_003483059.1|	-	0.00093	18.6	0.5	0.043	13.1	0.0	2.6	2	1	1	3	3	3	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.6	gi|289596363|ref|YP_003483059.1|	-	0.0012	19.0	0.0	0.085	13.1	0.0	2.6	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.17	gi|289596363|ref|YP_003483059.1|	-	0.0021	17.3	2.7	0.53	9.5	0.0	2.7	2	1	1	3	3	3	2	Thi4	family
ELFV_dehydrog	PF00208.21	gi|289596363|ref|YP_003483059.1|	-	0.0024	17.7	0.3	2.3	7.9	0.6	2.3	1	1	1	2	2	2	2	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
K_oxygenase	PF13434.6	gi|289596363|ref|YP_003483059.1|	-	0.0026	17.0	0.0	0.67	9.0	0.0	2.9	2	1	1	3	3	3	1	L-lysine	6-monooxygenase	(NADPH-requiring)
FAD_binding_3	PF01494.19	gi|289596363|ref|YP_003483059.1|	-	0.0048	16.2	3.3	0.1	11.8	0.1	2.6	2	1	1	3	3	3	1	FAD	binding	domain
FAD_binding_2	PF00890.24	gi|289596363|ref|YP_003483059.1|	-	0.0062	15.7	2.2	0.21	10.6	0.1	2.5	2	1	0	2	2	2	1	FAD	binding	domain
DUF1188	PF06690.11	gi|289596363|ref|YP_003483059.1|	-	0.0093	15.5	0.2	0.036	13.6	0.1	1.9	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1188)
3HCDH_N	PF02737.18	gi|289596363|ref|YP_003483059.1|	-	0.035	14.0	1.6	10	5.9	1.8	2.3	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
KR	PF08659.10	gi|289596363|ref|YP_003483059.1|	-	0.15	11.9	0.3	0.26	11.2	0.3	1.3	1	0	0	1	1	1	0	KR	domain
PcrB	PF01884.17	gi|289596363|ref|YP_003483059.1|	-	0.18	11.2	5.7	0.88	9.0	0.0	3.2	4	0	0	4	4	4	0	PcrB	family
TrkA_N	PF02254.18	gi|289596363|ref|YP_003483059.1|	-	5.5	7.3	6.9	0.4	10.9	0.2	2.7	4	0	0	4	4	2	0	TrkA-N	domain
Nitro_FeMo-Co	PF02579.17	gi|289596364|ref|YP_003483060.1|	-	1e-21	77.0	0.0	1.4e-21	76.6	0.0	1.2	1	0	0	1	1	1	1	Dinitrogenase	iron-molybdenum	cofactor
NosD	PF05048.13	gi|289596365|ref|YP_003483061.1|	-	4.3e-21	75.3	42.4	7.2e-21	74.6	30.5	2.7	1	1	2	3	3	3	2	Periplasmic	copper-binding	protein	(NosD)
RGI_lyase	PF18370.1	gi|289596365|ref|YP_003483061.1|	-	2.2e-06	27.9	0.4	1.1e-05	25.6	0.0	2.3	2	0	0	2	2	2	1	Rhamnogalacturonan	I	lyases	beta-sheet	domain
HCV_core	PF01542.18	gi|289596365|ref|YP_003483061.1|	-	0.013	15.8	0.1	0.12	12.8	0.0	2.3	2	0	0	2	2	2	0	Hepatitis	C	virus	core	protein
B12-binding	PF02310.19	gi|289596366|ref|YP_003483062.1|	-	1.5e-28	99.3	0.0	4.8e-28	97.6	0.0	1.8	2	0	0	2	2	2	1	B12	binding	domain
Radical_SAM	PF04055.21	gi|289596366|ref|YP_003483062.1|	-	2.5e-25	89.8	0.0	1.6e-24	87.1	0.0	2.1	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|289596366|ref|YP_003483062.1|	-	0.027	14.6	0.0	0.088	12.9	0.0	1.8	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
Radical_SAM	PF04055.21	gi|289596367|ref|YP_003483063.1|	-	2.2e-25	90.0	0.0	8.2e-25	88.1	0.0	2.1	1	1	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|289596367|ref|YP_003483063.1|	-	5.1e-12	46.2	0.0	1.2e-11	45.0	0.0	1.6	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|289596367|ref|YP_003483063.1|	-	1.9e-09	37.6	0.0	5.1e-09	36.3	0.0	1.8	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
SPASM	PF13186.6	gi|289596367|ref|YP_003483063.1|	-	6.8e-08	32.9	0.8	1.9e-07	31.5	0.8	1.8	1	0	0	1	1	1	1	Iron-sulfur	cluster-binding	domain
HMGL-like	PF00682.19	gi|289596367|ref|YP_003483063.1|	-	0.041	13.4	0.1	0.32	10.5	0.1	2.3	1	1	0	1	1	1	0	HMGL-like
HTH_22	PF13309.6	gi|289596367|ref|YP_003483063.1|	-	0.093	12.8	0.0	7.8	6.7	0.0	2.9	2	0	0	2	2	2	0	HTH	domain
Ysc84	PF04366.12	gi|289596367|ref|YP_003483063.1|	-	0.095	12.5	0.0	0.21	11.3	0.0	1.6	1	0	0	1	1	1	0	Las17-binding	protein	actin	regulator
TrmB	PF01978.19	gi|289596368|ref|YP_003483064.1|	-	2.9e-12	46.3	0.5	7.8e-12	44.9	0.2	1.8	1	1	1	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
Penicillinase_R	PF03965.16	gi|289596368|ref|YP_003483064.1|	-	2.7e-06	27.7	0.2	4.2e-06	27.1	0.2	1.4	1	1	0	1	1	1	1	Penicillinase	repressor
HTH_Crp_2	PF13545.6	gi|289596368|ref|YP_003483064.1|	-	1.5e-05	24.9	0.0	5.3e-05	23.1	0.0	1.9	2	0	0	2	2	2	1	Crp-like	helix-turn-helix	domain
HTH_CodY	PF08222.11	gi|289596368|ref|YP_003483064.1|	-	0.00012	21.6	0.0	0.00024	20.6	0.0	1.5	1	0	0	1	1	1	1	CodY	helix-turn-helix	domain
MarR_2	PF12802.7	gi|289596368|ref|YP_003483064.1|	-	0.00035	20.4	0.0	0.00055	19.8	0.0	1.3	1	0	0	1	1	1	1	MarR	family
Rrf2	PF02082.20	gi|289596368|ref|YP_003483064.1|	-	0.00037	20.8	0.1	0.00065	20.0	0.1	1.3	1	0	0	1	1	1	1	Transcriptional	regulator
MarR	PF01047.22	gi|289596368|ref|YP_003483064.1|	-	0.00052	19.9	0.0	0.00092	19.1	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_IclR	PF09339.10	gi|289596368|ref|YP_003483064.1|	-	0.002	17.9	0.0	0.0042	16.9	0.0	1.5	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
GntR	PF00392.21	gi|289596368|ref|YP_003483064.1|	-	0.0025	17.5	0.0	0.0056	16.3	0.0	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HTH_20	PF12840.7	gi|289596368|ref|YP_003483064.1|	-	0.0026	17.8	0.1	0.0071	16.4	0.0	1.7	2	0	0	2	2	2	1	Helix-turn-helix	domain
Fe_dep_repress	PF01325.19	gi|289596368|ref|YP_003483064.1|	-	0.0043	17.2	0.2	0.009	16.2	0.2	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Phage_rep_org_N	PF09681.10	gi|289596368|ref|YP_003483064.1|	-	0.0048	16.8	0.8	0.0091	15.9	0.6	1.7	1	1	0	1	1	1	1	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
TBPIP	PF07106.13	gi|289596368|ref|YP_003483064.1|	-	0.0076	16.2	0.2	0.013	15.4	0.2	1.4	1	0	0	1	1	1	1	TBPIP/Hop2	winged	helix	domain
DUF4423	PF14394.6	gi|289596368|ref|YP_003483064.1|	-	0.0095	15.7	0.2	0.023	14.4	0.1	1.7	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4423)
HTH_5	PF01022.20	gi|289596368|ref|YP_003483064.1|	-	0.024	14.5	0.1	0.061	13.2	0.0	1.7	2	0	0	2	2	1	0	Bacterial	regulatory	protein,	arsR	family
HTH_9	PF08221.11	gi|289596368|ref|YP_003483064.1|	-	0.025	14.7	0.0	0.071	13.2	0.0	1.7	2	0	0	2	2	2	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
HTH_11	PF08279.12	gi|289596368|ref|YP_003483064.1|	-	0.037	14.0	0.0	0.073	13.0	0.0	1.5	1	0	0	1	1	1	0	HTH	domain
HTH_40	PF14493.6	gi|289596368|ref|YP_003483064.1|	-	0.046	14.2	0.9	0.07	13.6	0.3	1.7	2	1	0	2	2	1	0	Helix-turn-helix	domain
HTH_38	PF13936.6	gi|289596368|ref|YP_003483064.1|	-	0.057	13.2	0.0	0.12	12.1	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
EC042_2821	PF18740.1	gi|289596368|ref|YP_003483064.1|	-	0.06	13.2	0.2	0.086	12.7	0.2	1.2	1	0	0	1	1	1	0	EC042_2821-lke	REase
EutK_C	PF16365.5	gi|289596368|ref|YP_003483064.1|	-	0.07	13.2	0.0	0.11	12.5	0.0	1.3	1	0	0	1	1	1	0	Ethanolamine	utilization	protein	EutK	C-terminus
LexA_DNA_bind	PF01726.16	gi|289596368|ref|YP_003483064.1|	-	0.11	12.3	0.1	0.22	11.3	0.1	1.5	1	0	0	1	1	1	0	LexA	DNA	binding	domain
FaeA	PF04703.12	gi|289596368|ref|YP_003483064.1|	-	0.12	12.7	0.4	0.33	11.4	0.1	1.8	2	0	0	2	2	2	0	FaeA-like	protein
HTH_27	PF13463.6	gi|289596368|ref|YP_003483064.1|	-	0.13	12.8	0.5	0.56	10.7	0.0	2.0	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
PhoU	PF01895.19	gi|289596368|ref|YP_003483064.1|	-	0.13	12.7	1.9	2.4	8.7	0.1	2.5	1	1	1	2	2	2	0	PhoU	domain
Usp	PF00582.26	gi|289596369|ref|YP_003483065.1|	-	4.4e-27	95.3	0.0	5.6e-27	95.0	0.0	1.1	1	0	0	1	1	1	1	Universal	stress	protein	family
SBF	PF01758.16	gi|289596370|ref|YP_003483066.1|	-	2.6e-44	151.2	23.9	2.6e-44	151.2	23.9	2.0	2	0	0	2	2	2	1	Sodium	Bile	acid	symporter	family
SBF_like	PF13593.6	gi|289596370|ref|YP_003483066.1|	-	1.2e-17	64.2	24.1	1.6e-17	63.8	24.1	1.1	1	0	0	1	1	1	1	SBF-like	CPA	transporter	family	(DUF4137)
HycI	PF01750.18	gi|289596371|ref|YP_003483067.1|	-	1.1e-22	80.3	0.1	1.3e-22	80.0	0.1	1.1	1	0	0	1	1	1	1	Hydrogenase	maturation	protease
Aconitase	PF00330.20	gi|289596372|ref|YP_003483068.1|	-	4.3e-74	250.2	0.0	6e-72	243.1	0.0	2.4	1	1	0	1	1	1	1	Aconitase	family	(aconitate	hydratase)
4HBT	PF03061.22	gi|289596373|ref|YP_003483069.1|	-	0.00018	21.8	0.0	0.00038	20.7	0.0	1.5	2	0	0	2	2	2	1	Thioesterase	superfamily
CN_hydrolase	PF00795.22	gi|289596374|ref|YP_003483070.1|	-	1.9e-41	142.1	0.0	2.1e-41	142.0	0.0	1.0	1	0	0	1	1	1	1	Carbon-nitrogen	hydrolase
MFS_1	PF07690.16	gi|289596375|ref|YP_003483071.1|	-	4.9e-30	104.6	53.2	9.9e-20	70.7	20.0	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_3	PF05977.13	gi|289596375|ref|YP_003483071.1|	-	1.4e-24	86.5	22.4	1.8e-24	86.1	22.4	1.0	1	0	0	1	1	1	1	Transmembrane	secretion	effector
MFS_2	PF13347.6	gi|289596375|ref|YP_003483071.1|	-	2.6e-13	49.3	37.7	3e-10	39.3	21.7	2.1	1	1	1	2	2	2	2	MFS/sugar	transport	protein
FPN1	PF06963.12	gi|289596375|ref|YP_003483071.1|	-	0.0038	15.9	8.9	0.059	11.9	7.2	3.0	2	1	1	3	3	3	1	Ferroportin1	(FPN1)
GDC-P	PF02347.16	gi|289596376|ref|YP_003483072.1|	-	4.5e-117	391.5	0.0	5.4e-117	391.2	0.0	1.0	1	0	0	1	1	1	1	Glycine	cleavage	system	P-protein
Aminotran_5	PF00266.19	gi|289596376|ref|YP_003483072.1|	-	0.0013	17.8	0.1	0.0035	16.4	0.0	1.6	2	0	0	2	2	2	1	Aminotransferase	class-V
GDC-P	PF02347.16	gi|289596377|ref|YP_003483073.1|	-	1.1e-13	50.8	0.0	1.2e-10	40.8	0.0	2.1	2	0	0	2	2	2	2	Glycine	cleavage	system	P-protein
Aminotran_5	PF00266.19	gi|289596377|ref|YP_003483073.1|	-	4.4e-09	35.8	0.0	6.8e-09	35.2	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.21	gi|289596377|ref|YP_003483073.1|	-	5.4e-05	22.6	0.0	7.9e-05	22.1	0.0	1.3	1	0	0	1	1	1	1	Beta-eliminating	lyase
Aminotran_1_2	PF00155.21	gi|289596377|ref|YP_003483073.1|	-	0.00018	20.8	0.0	0.0009	18.5	0.0	2.0	3	0	0	3	3	3	1	Aminotransferase	class	I	and	II
Pyridoxal_deC	PF00282.19	gi|289596377|ref|YP_003483073.1|	-	0.0057	15.4	0.1	2.1	7.0	0.0	2.2	2	0	0	2	2	2	2	Pyridoxal-dependent	decarboxylase	conserved	domain
Flavoprotein	PF02441.19	gi|289596378|ref|YP_003483074.1|	-	5.9e-27	94.3	0.1	7.7e-27	94.0	0.1	1.1	1	0	0	1	1	1	1	Flavoprotein
Pellino	PF04710.14	gi|289596378|ref|YP_003483074.1|	-	0.18	10.5	0.0	0.23	10.1	0.0	1.1	1	0	0	1	1	1	0	Pellino
Na_H_Exchanger	PF00999.21	gi|289596379|ref|YP_003483075.1|	-	7.8e-55	186.2	42.1	9.6e-55	185.9	42.1	1.0	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
TrkA_C	PF02080.21	gi|289596380|ref|YP_003483076.1|	-	6.8e-11	41.9	0.0	1.2e-10	41.0	0.0	1.5	1	0	0	1	1	1	1	TrkA-C	domain
DUF5381	PF17353.2	gi|289596380|ref|YP_003483076.1|	-	0.0018	18.0	0.7	0.0018	18.0	0.7	1.6	2	0	0	2	2	2	1	Family	of	unknown	function	(DUF5381)
DUF1700	PF08006.11	gi|289596380|ref|YP_003483076.1|	-	6.4	6.3	8.6	5.9	6.4	0.3	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1700)
PNP_UDP_1	PF01048.20	gi|289596381|ref|YP_003483077.1|	-	8.7e-52	175.7	0.0	1e-51	175.4	0.0	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
RBFA	PF02033.18	gi|289596381|ref|YP_003483077.1|	-	0.13	12.7	0.0	0.2	12.1	0.0	1.3	1	0	0	1	1	1	0	Ribosome-binding	factor	A
Polysacc_synt	PF01943.17	gi|289596382|ref|YP_003483078.1|	-	5.3e-16	58.8	29.3	5.3e-16	58.8	29.3	3.2	1	1	1	3	3	3	1	Polysaccharide	biosynthesis	protein
Polysacc_synt_C	PF14667.6	gi|289596382|ref|YP_003483078.1|	-	1.9e-14	53.9	15.9	1.9e-14	53.9	15.9	3.4	2	1	1	3	3	3	2	Polysaccharide	biosynthesis	C-terminal	domain
IspD	PF01128.19	gi|289596383|ref|YP_003483079.1|	-	2.2e-49	168.2	0.0	3.3e-49	167.6	0.0	1.2	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
adh_short	PF00106.25	gi|289596383|ref|YP_003483079.1|	-	4e-31	108.0	4.7	1.5e-29	102.9	0.4	2.3	1	1	1	2	2	2	2	short	chain	dehydrogenase
adh_short_C2	PF13561.6	gi|289596383|ref|YP_003483079.1|	-	1.4e-29	103.3	0.0	2.4e-29	102.6	0.0	1.4	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
NTP_transf_3	PF12804.7	gi|289596383|ref|YP_003483079.1|	-	8.6e-12	45.7	0.0	1.9e-11	44.6	0.0	1.6	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
KR	PF08659.10	gi|289596383|ref|YP_003483079.1|	-	2e-09	37.6	0.6	5.1e-09	36.3	0.0	1.8	1	1	0	2	2	2	1	KR	domain
NTP_transferase	PF00483.23	gi|289596383|ref|YP_003483079.1|	-	0.00029	20.5	0.0	0.00049	19.8	0.0	1.4	1	0	0	1	1	1	1	Nucleotidyl	transferase
Glyphos_transf	PF04464.14	gi|289596384|ref|YP_003483080.1|	-	7.7e-55	186.3	6.5	9.1e-55	186.1	6.5	1.0	1	0	0	1	1	1	1	CDP-Glycerol:Poly(glycerophosphate)	glycerophosphotransferase
GTF2I	PF02946.14	gi|289596384|ref|YP_003483080.1|	-	0.031	14.3	0.2	2.9	8.0	0.0	2.6	2	0	0	2	2	2	0	GTF2I-like	repeat
NTP_transferase	PF00483.23	gi|289596385|ref|YP_003483081.1|	-	2.1e-31	109.4	0.0	3e-31	108.9	0.0	1.2	1	0	0	1	1	1	1	Nucleotidyl	transferase
Cupin_2	PF07883.11	gi|289596385|ref|YP_003483081.1|	-	1.4e-09	37.5	0.1	2.9e-09	36.5	0.1	1.4	1	0	0	1	1	1	1	Cupin	domain
NTP_transf_3	PF12804.7	gi|289596385|ref|YP_003483081.1|	-	4.8e-09	36.8	0.0	9.5e-09	35.8	0.0	1.3	1	1	0	1	1	1	1	MobA-like	NTP	transferase	domain
MannoseP_isomer	PF01050.18	gi|289596385|ref|YP_003483081.1|	-	1.1e-08	35.1	0.7	2.2e-08	34.1	0.5	1.6	2	0	0	2	2	2	1	Mannose-6-phosphate	isomerase
AraC_binding	PF02311.19	gi|289596385|ref|YP_003483081.1|	-	0.0011	18.8	0.0	0.0019	18.1	0.0	1.3	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
Cupin_1	PF00190.22	gi|289596385|ref|YP_003483081.1|	-	0.0051	16.4	0.0	0.01	15.5	0.0	1.4	1	0	0	1	1	1	1	Cupin
Cupin_3	PF05899.12	gi|289596385|ref|YP_003483081.1|	-	0.014	15.0	0.0	0.032	13.9	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF861)
Ppnp	PF06865.11	gi|289596385|ref|YP_003483081.1|	-	0.02	15.3	0.0	0.043	14.2	0.0	1.5	1	0	0	1	1	1	0	Pyrimidine/purine	nucleoside	phosphorylase
Ago_PAZ	PF18309.1	gi|289596385|ref|YP_003483081.1|	-	0.11	13.2	0.4	0.23	12.2	0.4	1.5	1	0	0	1	1	1	0	Argonaute	PAZ	domain
Glyco_transf_4	PF13439.6	gi|289596386|ref|YP_003483082.1|	-	0.01	15.8	0.0	0.016	15.2	0.0	1.3	1	0	0	1	1	1	0	Glycosyltransferase	Family	4
UPF0262	PF06793.12	gi|289596386|ref|YP_003483082.1|	-	0.04	14.0	0.0	0.088	12.9	0.0	1.5	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0262)
TAL_FSA	PF00923.19	gi|289596387|ref|YP_003483083.1|	-	4.5e-54	183.8	0.0	8.1e-54	182.9	0.0	1.4	1	1	0	1	1	1	1	Transaldolase/Fructose-6-phosphate	aldolase
Transket_pyr	PF02779.24	gi|289596388|ref|YP_003483084.1|	-	2.5e-37	128.3	0.0	3.8e-37	127.7	0.0	1.1	1	0	0	1	1	1	1	Transketolase,	pyrimidine	binding	domain
Transketolase_C	PF02780.20	gi|289596388|ref|YP_003483084.1|	-	1.8e-31	108.6	0.1	3.6e-30	104.4	0.0	2.2	2	0	0	2	2	2	1	Transketolase,	C-terminal	domain
PFOR_II	PF17147.4	gi|289596388|ref|YP_003483084.1|	-	0.0072	16.6	0.3	0.23	11.8	0.0	3.0	2	1	2	4	4	4	1	Pyruvate:ferredoxin	oxidoreductase	core	domain	II
Transketolase_N	PF00456.21	gi|289596389|ref|YP_003483085.1|	-	6.9e-65	219.2	0.0	1e-64	218.6	0.0	1.1	1	0	0	1	1	1	1	Transketolase,	thiamine	diphosphate	binding	domain
DXP_synthase_N	PF13292.6	gi|289596389|ref|YP_003483085.1|	-	4.7e-13	49.0	0.2	2.5e-09	36.7	0.0	2.6	1	1	1	2	2	2	2	1-deoxy-D-xylulose-5-phosphate	synthase
TPP_enzyme_C	PF02775.21	gi|289596389|ref|YP_003483085.1|	-	9.8e-09	35.2	0.0	8.4e-06	25.6	0.0	2.3	2	0	0	2	2	2	2	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
E1_dh	PF00676.20	gi|289596389|ref|YP_003483085.1|	-	2.3e-08	33.3	0.0	3.1e-08	32.9	0.0	1.1	1	0	0	1	1	1	1	Dehydrogenase	E1	component
XFP_N	PF09364.10	gi|289596389|ref|YP_003483085.1|	-	1.2e-06	27.6	0.0	2.7e-06	26.5	0.0	1.6	1	1	1	2	2	2	1	XFP	N-terminal	domain
Vsr	PF03852.15	gi|289596389|ref|YP_003483085.1|	-	0.0042	16.9	0.0	0.047	13.6	0.0	2.2	2	0	0	2	2	2	1	DNA	mismatch	endonuclease	Vsr
AAA_25	PF13481.6	gi|289596389|ref|YP_003483085.1|	-	0.018	14.7	0.1	0.028	14.0	0.1	1.3	1	0	0	1	1	1	0	AAA	domain
TIR_2	PF13676.6	gi|289596389|ref|YP_003483085.1|	-	0.11	13.0	0.0	0.3	11.7	0.0	1.8	1	1	0	1	1	1	0	TIR	domain
DUF763	PF05559.11	gi|289596390|ref|YP_003483086.1|	-	1.2e-133	445.1	0.0	1.4e-133	444.9	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF763)
HHH	PF00633.23	gi|289596390|ref|YP_003483086.1|	-	0.00073	19.3	0.0	0.0022	17.8	0.0	1.8	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_5	PF14520.6	gi|289596390|ref|YP_003483086.1|	-	0.031	14.9	0.0	0.093	13.4	0.0	1.8	1	0	0	1	1	1	0	Helix-hairpin-helix	domain
ATPase	PF06745.13	gi|289596391|ref|YP_003483087.1|	-	1.9e-27	96.1	2.7	4.6e-27	94.9	2.7	1.5	1	1	0	1	1	1	1	KaiC
AAA_24	PF13479.6	gi|289596391|ref|YP_003483087.1|	-	0.026	14.3	1.5	5.7	6.6	0.0	2.6	1	1	0	2	2	2	0	AAA	domain
GvpD	PF07088.11	gi|289596391|ref|YP_003483087.1|	-	0.063	11.9	0.7	0.13	10.8	0.7	1.5	1	1	0	1	1	1	0	GvpD	gas	vesicle	protein
AAA_25	PF13481.6	gi|289596391|ref|YP_003483087.1|	-	0.12	12.0	0.0	1	8.9	0.0	2.1	1	1	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.17	gi|289596391|ref|YP_003483087.1|	-	0.14	11.9	0.0	0.32	10.7	0.0	1.6	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
ATPase	PF06745.13	gi|289596392|ref|YP_003483088.1|	-	8e-05	22.1	0.4	0.00011	21.7	0.4	1.1	1	0	0	1	1	1	1	KaiC
DUF5085	PF16895.5	gi|289596392|ref|YP_003483088.1|	-	0.019	15.3	1.0	0.029	14.7	1.0	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF5085)
Elong_Iki1	PF10483.9	gi|289596392|ref|YP_003483088.1|	-	0.02	14.4	0.2	0.023	14.2	0.2	1.2	1	0	0	1	1	1	0	Elongator	subunit	Iki1
DUF5106	PF17127.4	gi|289596392|ref|YP_003483088.1|	-	0.097	12.9	0.0	0.19	12.0	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF5106)
UPF0228	PF05727.11	gi|289596392|ref|YP_003483088.1|	-	0.23	11.3	3.4	1	9.2	1.4	2.1	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0228)
DUF835	PF05763.12	gi|289596392|ref|YP_003483088.1|	-	0.44	10.3	4.9	0.28	10.9	2.0	2.0	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF835)
ATPase	PF06745.13	gi|289596393|ref|YP_003483089.1|	-	4e-58	196.5	1.0	4.6e-58	196.3	1.0	1.0	1	0	0	1	1	1	1	KaiC
GvpD	PF07088.11	gi|289596393|ref|YP_003483089.1|	-	7e-08	31.5	0.4	9.3e-08	31.1	0.4	1.2	1	0	0	1	1	1	1	GvpD	gas	vesicle	protein
AAA_25	PF13481.6	gi|289596393|ref|YP_003483089.1|	-	1.7e-07	31.0	0.0	5e-07	29.5	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
Rad51	PF08423.11	gi|289596393|ref|YP_003483089.1|	-	1.5e-06	27.7	1.7	3.5e-06	26.5	1.7	1.5	1	1	0	1	1	1	1	Rad51
DnaB_C	PF03796.15	gi|289596393|ref|YP_003483089.1|	-	3.4e-05	23.3	0.0	4.5e-05	22.9	0.0	1.1	1	0	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
RecA	PF00154.21	gi|289596393|ref|YP_003483089.1|	-	0.00047	19.7	0.6	0.00088	18.8	0.1	1.6	2	0	0	2	2	2	1	recA	bacterial	DNA	recombination	protein
ATPase_2	PF01637.18	gi|289596393|ref|YP_003483089.1|	-	0.00074	19.5	0.3	0.0012	18.8	0.3	1.3	1	0	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
AAA_14	PF13173.6	gi|289596393|ref|YP_003483089.1|	-	0.00083	19.4	0.3	0.0018	18.3	0.3	1.7	1	1	0	1	1	1	1	AAA	domain
PAXNEB	PF05625.11	gi|289596393|ref|YP_003483089.1|	-	0.00092	18.5	0.8	0.0076	15.4	0.1	2.0	1	1	0	2	2	2	1	PAXNEB	protein
AAA_18	PF13238.6	gi|289596393|ref|YP_003483089.1|	-	0.0073	16.9	0.7	0.012	16.2	0.7	1.5	1	1	0	1	1	1	1	AAA	domain
T2SSE	PF00437.20	gi|289596393|ref|YP_003483089.1|	-	0.011	14.8	0.1	0.018	14.1	0.1	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_24	PF13479.6	gi|289596393|ref|YP_003483089.1|	-	0.012	15.3	1.9	0.036	13.8	1.9	1.8	1	1	0	1	1	1	0	AAA	domain
MEDS	PF14417.6	gi|289596393|ref|YP_003483089.1|	-	0.015	15.2	0.0	0.024	14.5	0.0	1.2	1	0	0	1	1	1	0	MEDS:	MEthanogen/methylotroph,	DcmR	Sensory	domain
IstB_IS21	PF01695.17	gi|289596393|ref|YP_003483089.1|	-	0.024	14.4	0.0	0.038	13.7	0.0	1.3	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA_22	PF13401.6	gi|289596393|ref|YP_003483089.1|	-	0.037	14.3	1.2	0.094	13.0	1.2	1.6	1	1	0	1	1	1	0	AAA	domain
AAA_16	PF13191.6	gi|289596393|ref|YP_003483089.1|	-	0.039	14.3	0.0	0.071	13.5	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
TniB	PF05621.11	gi|289596393|ref|YP_003483089.1|	-	0.04	13.3	0.7	4.9	6.5	0.2	2.2	2	0	0	2	2	2	0	Bacterial	TniB	protein
Hpr_kinase_C	PF07475.12	gi|289596393|ref|YP_003483089.1|	-	0.041	13.4	0.3	0.13	11.8	0.1	1.9	1	1	1	2	2	2	0	HPr	Serine	kinase	C-terminal	domain
AAA_7	PF12775.7	gi|289596393|ref|YP_003483089.1|	-	0.045	13.3	0.0	0.063	12.8	0.0	1.3	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
Sigma54_activat	PF00158.26	gi|289596393|ref|YP_003483089.1|	-	0.058	13.1	0.0	0.097	12.4	0.0	1.4	1	0	0	1	1	1	0	Sigma-54	interaction	domain
DUF1825	PF08855.10	gi|289596393|ref|YP_003483089.1|	-	0.083	12.8	0.6	0.15	12.0	0.6	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1825)
AAA_28	PF13521.6	gi|289596393|ref|YP_003483089.1|	-	0.1	12.8	0.1	0.23	11.7	0.0	1.7	2	0	0	2	2	1	0	AAA	domain
APS_kinase	PF01583.20	gi|289596393|ref|YP_003483089.1|	-	0.11	12.4	0.7	0.65	9.9	0.1	2.0	1	1	1	2	2	2	0	Adenylylsulphate	kinase
DUF2075	PF09848.9	gi|289596393|ref|YP_003483089.1|	-	0.11	11.7	0.0	0.14	11.4	0.0	1.1	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
Zot	PF05707.12	gi|289596393|ref|YP_003483089.1|	-	0.12	12.0	0.0	0.24	11.0	0.0	1.6	2	0	0	2	2	2	0	Zonular	occludens	toxin	(Zot)
AAA	PF00004.29	gi|289596393|ref|YP_003483089.1|	-	0.12	12.8	0.7	0.31	11.4	0.7	1.7	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ABC_tran	PF00005.27	gi|289596393|ref|YP_003483089.1|	-	0.12	12.9	0.7	0.22	12.0	0.7	1.5	1	1	0	1	1	1	0	ABC	transporter
ResIII	PF04851.15	gi|289596393|ref|YP_003483089.1|	-	0.15	12.1	0.3	0.24	11.4	0.3	1.4	1	1	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
RsgA_GTPase	PF03193.16	gi|289596393|ref|YP_003483089.1|	-	0.16	11.9	2.6	2.7	7.9	0.1	2.2	1	1	1	2	2	2	0	RsgA	GTPase
ATP-synt_ab	PF00006.25	gi|289596393|ref|YP_003483089.1|	-	0.21	11.2	0.0	0.31	10.6	0.0	1.3	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_29	PF13555.6	gi|289596393|ref|YP_003483089.1|	-	0.25	11.1	1.4	0.53	10.1	1.4	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
MFS_1	PF07690.16	gi|289596394|ref|YP_003483090.1|	-	2e-34	119.1	67.7	2.9e-23	82.4	32.7	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_3	PF05977.13	gi|289596394|ref|YP_003483090.1|	-	6.5e-06	24.8	19.6	9e-06	24.3	19.6	1.2	1	0	0	1	1	1	1	Transmembrane	secretion	effector
MFS_1_like	PF12832.7	gi|289596394|ref|YP_003483090.1|	-	2.3e-05	23.5	12.3	2.3e-05	23.5	12.3	2.1	1	1	1	2	2	2	2	MFS_1	like	family
HTH_3	PF01381.22	gi|289596395|ref|YP_003483091.1|	-	1.2e-11	44.5	0.0	2.6e-11	43.4	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix
HTH_31	PF13560.6	gi|289596395|ref|YP_003483091.1|	-	3.1e-09	37.1	0.0	6.3e-09	36.0	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_19	PF12844.7	gi|289596395|ref|YP_003483091.1|	-	5.5e-09	35.9	0.0	1.4e-08	34.6	0.0	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_37	PF13744.6	gi|289596395|ref|YP_003483091.1|	-	0.034	14.1	0.0	0.063	13.2	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_26	PF13443.6	gi|289596395|ref|YP_003483091.1|	-	0.045	14.2	0.0	0.1	13.0	0.0	1.6	1	0	0	1	1	1	0	Cro/C1-type	HTH	DNA-binding	domain
Sigma70_r4_2	PF08281.12	gi|289596395|ref|YP_003483091.1|	-	0.065	12.9	0.0	0.15	11.7	0.0	1.7	1	0	0	1	1	1	0	Sigma-70,	region	4
MqsA_antitoxin	PF15731.5	gi|289596395|ref|YP_003483091.1|	-	0.079	13.1	0.0	0.13	12.4	0.0	1.3	1	0	0	1	1	1	0	Antitoxin	component	of	bacterial	toxin-antitoxin	system,	MqsA
HTH_24	PF13412.6	gi|289596395|ref|YP_003483091.1|	-	0.095	12.3	0.0	0.49	10.0	0.0	2.2	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
HTH_Crp_2	PF13545.6	gi|289596395|ref|YP_003483091.1|	-	0.12	12.4	0.0	0.21	11.6	0.0	1.5	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
Lyase_aromatic	PF00221.19	gi|289596396|ref|YP_003483092.1|	-	1.3e-193	643.9	0.8	1.6e-193	643.6	0.8	1.0	1	0	0	1	1	1	1	Aromatic	amino	acid	lyase
PmbA_TldD	PF01523.16	gi|289596398|ref|YP_003483094.1|	-	2.5e-34	119.4	0.1	3.3e-34	119.0	0.1	1.2	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
PmbA_TldD	PF01523.16	gi|289596399|ref|YP_003483095.1|	-	2.2e-47	162.3	0.6	3e-47	161.8	0.6	1.2	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
Mto2_bdg	PF12808.7	gi|289596399|ref|YP_003483095.1|	-	0.11	12.8	0.7	0.29	11.5	0.7	1.7	1	0	0	1	1	1	0	Micro-tubular	organiser	Mto1	C-term	Mto2-binding	region
Proteasome	PF00227.26	gi|289596400|ref|YP_003483096.1|	-	1.5e-18	66.9	0.0	4.1e-18	65.6	0.0	1.6	1	1	0	1	1	1	1	Proteasome	subunit
Proteasome_A_N	PF10584.9	gi|289596400|ref|YP_003483096.1|	-	7.3e-09	35.2	1.7	2.9e-08	33.3	0.1	2.6	3	0	0	3	3	3	1	Proteasome	subunit	A	N-terminal	signature
RHH_1	PF01402.21	gi|289596400|ref|YP_003483096.1|	-	6.7e-05	22.7	0.2	0.00036	20.3	0.1	2.1	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
MukE	PF04288.13	gi|289596400|ref|YP_003483096.1|	-	0.027	13.4	0.0	0.041	12.8	0.0	1.2	1	0	0	1	1	1	0	MukE-like	family
DUF389	PF04087.14	gi|289596401|ref|YP_003483097.1|	-	2.5e-27	95.6	15.7	2.5e-27	95.6	15.7	1.9	2	1	0	2	2	2	1	Domain	of	unknown	function	(DUF389)
DUF1129	PF06570.11	gi|289596401|ref|YP_003483097.1|	-	0.53	9.7	20.9	0.17	11.4	5.9	3.0	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF1129)
DUF2070	PF09843.9	gi|289596401|ref|YP_003483097.1|	-	7	4.8	22.5	12	4.0	22.5	1.4	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
AA_kinase	PF00696.28	gi|289596402|ref|YP_003483098.1|	-	4.9e-36	124.5	0.0	5.9e-36	124.3	0.0	1.1	1	0	0	1	1	1	1	Amino	acid	kinase	family
FMN_dh	PF01070.18	gi|289596403|ref|YP_003483099.1|	-	1.8e-23	83.1	0.6	8.5e-14	51.3	0.5	2.5	2	2	0	2	2	2	2	FMN-dependent	dehydrogenase
Glu_synthase	PF01645.17	gi|289596403|ref|YP_003483099.1|	-	1.9e-06	27.3	0.1	2e-05	23.9	0.0	2.0	2	0	0	2	2	2	1	Conserved	region	in	glutamate	synthase
IMPDH	PF00478.25	gi|289596403|ref|YP_003483099.1|	-	1.9e-05	23.8	7.1	0.0012	17.9	0.6	3.1	2	2	1	3	3	3	2	IMP	dehydrogenase	/	GMP	reductase	domain
DHO_dh	PF01180.21	gi|289596403|ref|YP_003483099.1|	-	6e-05	22.4	0.1	0.00012	21.4	0.0	1.5	2	0	0	2	2	2	1	Dihydroorotate	dehydrogenase
RuvA_C	PF07499.13	gi|289596403|ref|YP_003483099.1|	-	0.054	13.9	0.0	0.16	12.5	0.0	1.9	1	0	0	1	1	1	0	RuvA,	C-terminal	domain
DUF4060	PF13269.6	gi|289596403|ref|YP_003483099.1|	-	0.14	12.2	0.0	0.29	11.2	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4060)
zf-ZPR1	PF03367.13	gi|289596404|ref|YP_003483100.1|	-	3.9e-33	114.6	0.0	4.8e-33	114.3	0.0	1.1	1	0	0	1	1	1	1	ZPR1	zinc-finger	domain
Lar_restr_allev	PF14354.6	gi|289596404|ref|YP_003483100.1|	-	0.0021	18.4	0.3	0.0037	17.6	0.3	1.4	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
zf-piccolo	PF05715.13	gi|289596404|ref|YP_003483100.1|	-	0.0057	16.8	0.5	0.0087	16.2	0.5	1.3	1	0	0	1	1	1	1	Piccolo	Zn-finger
TF_Zn_Ribbon	PF08271.12	gi|289596404|ref|YP_003483100.1|	-	0.057	12.9	1.7	2	8.0	0.0	2.5	2	0	0	2	2	2	0	TFIIB	zinc-binding
Prim_Zn_Ribbon	PF08273.12	gi|289596404|ref|YP_003483100.1|	-	0.12	12.7	4.1	0.63	10.4	4.1	1.9	1	1	0	1	1	1	0	Zinc-binding	domain	of	primase-helicase
DNA_RNApol_7kD	PF03604.13	gi|289596404|ref|YP_003483100.1|	-	0.19	11.4	1.2	0.72	9.6	0.1	2.2	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-ribbon_3	PF13248.6	gi|289596404|ref|YP_003483100.1|	-	0.29	10.6	2.9	11	5.5	0.5	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
Auto_anti-p27	PF06677.12	gi|289596404|ref|YP_003483100.1|	-	0.5	10.6	2.6	1.3	9.2	2.6	1.7	1	1	0	1	1	1	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
tRNA-synt_2b	PF00587.25	gi|289596405|ref|YP_003483101.1|	-	4.5e-26	91.9	0.0	8e-26	91.1	0.0	1.4	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.20	gi|289596405|ref|YP_003483101.1|	-	1.5e-20	73.1	0.2	3.7e-20	71.9	0.2	1.7	1	0	0	1	1	1	1	Anticodon	binding	domain
ProRS-C_1	PF09180.11	gi|289596405|ref|YP_003483101.1|	-	6.2e-13	48.8	2.0	6.2e-13	48.8	2.0	2.8	2	1	1	3	3	3	1	Prolyl-tRNA	synthetase,	C-terminal
DUF643	PF04867.12	gi|289596405|ref|YP_003483101.1|	-	0.057	14.0	0.1	0.16	12.6	0.1	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF643)
DUF3149	PF11346.8	gi|289596406|ref|YP_003483102.1|	-	0.17	11.6	15.7	0.89	9.2	3.6	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3149)
Popeye	PF04831.13	gi|289596406|ref|YP_003483102.1|	-	3.7	7.7	6.7	3.7	7.7	6.7	1.0	1	0	0	1	1	1	0	Popeye	protein	conserved	region
HAD_2	PF13419.6	gi|289596407|ref|YP_003483103.1|	-	1.6e-11	44.6	0.6	4.3e-11	43.2	0.6	1.7	1	1	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.6	gi|289596407|ref|YP_003483103.1|	-	7.8e-07	29.1	0.0	1.3e-06	28.3	0.0	1.3	1	0	0	1	1	1	1	HAD-hyrolase-like
Hydrolase	PF00702.26	gi|289596407|ref|YP_003483103.1|	-	6.4e-05	23.3	0.0	0.0015	18.8	0.0	2.0	1	1	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
Acid_phosphat_B	PF03767.14	gi|289596407|ref|YP_003483103.1|	-	0.04	13.5	0.0	0.12	11.9	0.0	1.8	2	0	0	2	2	2	0	HAD	superfamily,	subfamily	IIIB	(Acid	phosphatase)
DUF2683	PF10884.8	gi|289596407|ref|YP_003483103.1|	-	0.076	13.3	0.2	0.13	12.5	0.2	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2683)
Aminotran_1_2	PF00155.21	gi|289596408|ref|YP_003483104.1|	-	4e-66	223.6	0.0	4.9e-66	223.4	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Cys_Met_Meta_PP	PF01053.20	gi|289596408|ref|YP_003483104.1|	-	2.6e-06	26.2	0.0	3.9e-06	25.7	0.0	1.1	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
DegT_DnrJ_EryC1	PF01041.17	gi|289596408|ref|YP_003483104.1|	-	0.0093	15.3	0.6	0.032	13.6	0.6	1.8	1	1	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_5	PF00266.19	gi|289596408|ref|YP_003483104.1|	-	0.016	14.2	0.0	0.023	13.7	0.0	1.2	1	0	0	1	1	1	0	Aminotransferase	class-V
Epimerase	PF01370.21	gi|289596409|ref|YP_003483105.1|	-	5.4e-31	107.9	0.0	7e-31	107.5	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
GDP_Man_Dehyd	PF16363.5	gi|289596409|ref|YP_003483105.1|	-	7.2e-29	101.2	0.1	7.2e-28	97.9	0.1	2.3	1	1	0	1	1	1	1	GDP-mannose	4,6	dehydratase
RmlD_sub_bind	PF04321.17	gi|289596409|ref|YP_003483105.1|	-	1.6e-12	47.2	0.0	2.2e-12	46.7	0.0	1.2	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
3Beta_HSD	PF01073.19	gi|289596409|ref|YP_003483105.1|	-	1.3e-11	44.0	0.0	1.9e-11	43.5	0.0	1.2	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
Polysacc_synt_2	PF02719.15	gi|289596409|ref|YP_003483105.1|	-	2.1e-09	36.9	0.0	9.9e-08	31.4	0.0	2.7	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.12	gi|289596409|ref|YP_003483105.1|	-	0.00011	21.4	0.0	0.00029	20.1	0.0	1.7	1	1	0	1	1	1	1	Male	sterility	protein
KR	PF08659.10	gi|289596409|ref|YP_003483105.1|	-	0.0018	18.2	0.0	0.057	13.3	0.0	2.3	1	1	0	1	1	1	1	KR	domain
NAD_binding_10	PF13460.6	gi|289596409|ref|YP_003483105.1|	-	0.079	12.8	0.0	0.11	12.3	0.0	1.3	1	0	0	1	1	1	0	NAD(P)H-binding
Asn_synthase	PF00733.21	gi|289596410|ref|YP_003483106.1|	-	2e-38	133.0	1.2	1.5e-18	67.7	0.1	2.0	1	1	1	2	2	2	2	Asparagine	synthase
NAD_synthase	PF02540.17	gi|289596410|ref|YP_003483106.1|	-	4.7e-05	22.6	0.1	0.0043	16.2	0.0	2.2	2	0	0	2	2	2	2	NAD	synthase
QueC	PF06508.13	gi|289596410|ref|YP_003483106.1|	-	0.0063	16.0	0.0	0.01	15.4	0.0	1.4	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
Arginosuc_synth	PF00764.19	gi|289596410|ref|YP_003483106.1|	-	0.025	13.9	0.0	0.043	13.1	0.0	1.3	1	0	0	1	1	1	0	Arginosuccinate	synthase
Cytidylate_kin2	PF13189.6	gi|289596410|ref|YP_003483106.1|	-	0.026	14.7	0.1	7.2	6.7	0.0	2.4	1	1	1	2	2	2	0	Cytidylate	kinase-like	family
ATP_bind_3	PF01171.20	gi|289596410|ref|YP_003483106.1|	-	0.1	12.4	0.0	0.16	11.7	0.0	1.4	1	0	0	1	1	1	0	PP-loop	family
tRNA_Me_trans	PF03054.16	gi|289596410|ref|YP_003483106.1|	-	0.17	10.6	0.2	1	8.0	0.2	2.0	1	1	0	1	1	1	0	tRNA	methyl	transferase
HGTP_anticodon	PF03129.20	gi|289596411|ref|YP_003483107.1|	-	2.1e-21	75.8	0.0	6.5e-21	74.3	0.0	1.9	1	0	0	1	1	1	1	Anticodon	binding	domain
tRNA-synt_2b	PF00587.25	gi|289596411|ref|YP_003483107.1|	-	1.7e-11	44.4	0.0	5.5e-11	42.7	0.0	1.8	1	1	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
zinc_ribbon_4	PF13717.6	gi|289596411|ref|YP_003483107.1|	-	0.0023	17.8	2.2	0.014	15.3	0.3	2.7	3	0	0	3	3	3	1	zinc-ribbon	domain
Zn-ribbon_8	PF09723.10	gi|289596411|ref|YP_003483107.1|	-	0.0043	17.2	1.2	0.034	14.3	1.2	2.2	1	1	0	1	1	1	1	Zinc	ribbon	domain
zinc_ribbon_5	PF13719.6	gi|289596411|ref|YP_003483107.1|	-	0.013	15.3	4.4	0.092	12.5	1.0	2.6	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|289596411|ref|YP_003483107.1|	-	0.087	12.3	1.4	7.5	6.1	0.2	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|289596411|ref|YP_003483107.1|	-	0.11	12.0	1.4	15	5.2	0.3	2.6	2	0	0	2	2	2	0	TFIIB	zinc-binding
DNA_RNApol_7kD	PF03604.13	gi|289596411|ref|YP_003483107.1|	-	0.11	12.2	3.2	0.84	9.4	0.2	2.5	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Terminase_GpA	PF05876.12	gi|289596411|ref|YP_003483107.1|	-	0.14	10.6	0.0	0.21	10.1	0.0	1.1	1	0	0	1	1	1	0	Phage	terminase	large	subunit	(GpA)
UPF0547	PF10571.9	gi|289596411|ref|YP_003483107.1|	-	0.49	10.5	3.2	3	8.0	0.2	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zf-C2H2	PF00096.26	gi|289596411|ref|YP_003483107.1|	-	0.77	10.3	2.8	16	6.2	0.1	3.2	3	0	0	3	3	3	0	Zinc	finger,	C2H2	type
TFIIS_C	PF01096.18	gi|289596411|ref|YP_003483107.1|	-	1.7	8.6	3.2	5.6	6.9	0.4	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
CBS	PF00571.28	gi|289596412|ref|YP_003483108.1|	-	1.6e-46	156.5	5.3	2.6e-13	50.2	0.1	4.2	4	0	0	4	4	4	4	CBS	domain
IF3_N	PF05198.16	gi|289596412|ref|YP_003483108.1|	-	0.00069	19.8	0.5	11	6.4	0.0	3.9	4	0	0	4	4	4	2	Translation	initiation	factor	IF-3,	N-terminal	domain
PRC	PF05239.16	gi|289596412|ref|YP_003483108.1|	-	0.0028	17.7	1.4	0.58	10.3	0.4	2.8	3	1	0	3	3	3	2	PRC-barrel	domain
HAD_2	PF13419.6	gi|289596413|ref|YP_003483109.1|	-	6.3e-16	59.0	0.2	8.5e-16	58.5	0.2	1.2	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Put_Phosphatase	PF06888.12	gi|289596413|ref|YP_003483109.1|	-	0.0028	17.1	0.0	0.0081	15.6	0.1	1.8	1	1	0	2	2	2	1	Putative	Phosphatase
Hydrolase	PF00702.26	gi|289596413|ref|YP_003483109.1|	-	0.01	16.1	0.0	0.047	14.0	0.0	1.9	1	1	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
PGI	PF00342.19	gi|289596413|ref|YP_003483109.1|	-	0.095	11.3	0.1	0.13	10.9	0.1	1.1	1	0	0	1	1	1	0	Phosphoglucose	isomerase
HEPN_RiboL-PSP	PF18735.1	gi|289596413|ref|YP_003483109.1|	-	0.097	12.6	5.7	0.43	10.5	5.6	2.2	1	1	1	2	2	2	0	RiboL-PSP-HEPN
Radical_SAM	PF04055.21	gi|289596414|ref|YP_003483110.1|	-	5.3e-17	62.7	0.2	6.7e-15	55.9	0.1	2.4	1	1	1	2	2	2	2	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|289596414|ref|YP_003483110.1|	-	4.2e-10	40.0	0.1	1.9e-09	37.9	0.0	2.0	2	1	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|289596414|ref|YP_003483110.1|	-	2.4e-08	34.1	0.9	1.2e-06	28.6	0.0	2.7	2	1	1	3	3	3	1	4Fe-4S	single	cluster	domain
SPASM	PF13186.6	gi|289596414|ref|YP_003483110.1|	-	8.4e-06	26.2	0.7	2.1e-05	24.9	0.7	1.6	1	0	0	1	1	1	1	Iron-sulfur	cluster-binding	domain
CPSase_L_D2	PF02786.17	gi|289596414|ref|YP_003483110.1|	-	0.13	11.7	0.0	0.2	11.1	0.0	1.2	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Radical_SAM	PF04055.21	gi|289596415|ref|YP_003483111.1|	-	4.8e-10	40.1	0.3	6.2e-10	39.7	0.3	1.2	1	0	0	1	1	1	1	Radical	SAM	superfamily
DUF1848	PF08902.11	gi|289596415|ref|YP_003483111.1|	-	0.17	11.6	7.9	3.6	7.2	3.6	2.6	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF1848)
ATPase_2	PF01637.18	gi|289596416|ref|YP_003483112.1|	-	6.2e-12	45.9	3.1	2.6e-10	40.6	0.5	2.8	2	1	1	3	3	3	1	ATPase	domain	predominantly	from	Archaea
AAA_14	PF13173.6	gi|289596416|ref|YP_003483112.1|	-	1.1e-09	38.4	0.3	2.5e-08	34.0	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
HTH_24	PF13412.6	gi|289596416|ref|YP_003483112.1|	-	3.3e-06	26.6	1.1	7.8e-05	22.2	0.0	3.1	3	0	0	3	3	3	1	Winged	helix-turn-helix	DNA-binding
HTH_Crp_2	PF13545.6	gi|289596416|ref|YP_003483112.1|	-	6.5e-06	26.0	0.0	2.6e-05	24.1	0.0	2.0	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_34	PF13601.6	gi|289596416|ref|YP_003483112.1|	-	1.7e-05	24.9	0.2	3.9e-05	23.7	0.2	1.6	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
Rrf2	PF02082.20	gi|289596416|ref|YP_003483112.1|	-	0.00061	20.1	0.1	0.0023	18.2	0.0	2.0	2	0	0	2	2	1	1	Transcriptional	regulator
TrmB	PF01978.19	gi|289596416|ref|YP_003483112.1|	-	0.0012	18.7	0.1	0.0056	16.5	0.1	2.3	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
AAA_16	PF13191.6	gi|289596416|ref|YP_003483112.1|	-	0.0013	19.1	0.0	0.004	17.5	0.0	1.9	1	1	1	2	2	2	1	AAA	ATPase	domain
PH_3	PF14593.6	gi|289596416|ref|YP_003483112.1|	-	0.0015	18.6	0.0	0.008	16.3	0.0	2.2	1	0	0	1	1	1	1	PH	domain
MarR	PF01047.22	gi|289596416|ref|YP_003483112.1|	-	0.0017	18.3	0.0	0.0063	16.4	0.0	1.9	1	0	0	1	1	1	1	MarR	family
PadR	PF03551.14	gi|289596416|ref|YP_003483112.1|	-	0.0027	17.6	0.1	0.018	15.0	0.0	2.3	2	0	0	2	2	2	1	Transcriptional	regulator	PadR-like	family
AAA_22	PF13401.6	gi|289596416|ref|YP_003483112.1|	-	0.005	17.1	0.0	0.018	15.3	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
ABC_tran	PF00005.27	gi|289596416|ref|YP_003483112.1|	-	0.0067	16.9	0.0	0.027	15.0	0.0	2.2	1	1	0	1	1	1	1	ABC	transporter
RsgA_GTPase	PF03193.16	gi|289596416|ref|YP_003483112.1|	-	0.0094	15.9	0.2	0.07	13.0	0.0	2.0	1	1	1	2	2	2	1	RsgA	GTPase
AAA_24	PF13479.6	gi|289596416|ref|YP_003483112.1|	-	0.013	15.2	0.1	0.25	11.0	0.1	2.7	1	1	1	3	3	3	0	AAA	domain
AAA_35	PF14516.6	gi|289596416|ref|YP_003483112.1|	-	0.018	13.9	0.0	0.043	12.7	0.0	1.5	1	0	0	1	1	1	0	AAA-like	domain
MarR_2	PF12802.7	gi|289596416|ref|YP_003483112.1|	-	0.025	14.5	0.0	0.085	12.8	0.0	1.9	2	0	0	2	2	1	0	MarR	family
AAA	PF00004.29	gi|289596416|ref|YP_003483112.1|	-	0.026	14.9	0.1	0.087	13.2	0.0	1.9	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
HTH_11	PF08279.12	gi|289596416|ref|YP_003483112.1|	-	0.034	14.1	0.0	0.25	11.3	0.0	2.4	2	0	0	2	2	2	0	HTH	domain
Rad17	PF03215.15	gi|289596416|ref|YP_003483112.1|	-	0.037	13.9	0.0	0.071	13.0	0.0	1.5	1	0	0	1	1	1	0	Rad17	P-loop	domain
IstB_IS21	PF01695.17	gi|289596416|ref|YP_003483112.1|	-	0.039	13.7	0.0	0.084	12.6	0.0	1.7	1	1	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA_19	PF13245.6	gi|289596416|ref|YP_003483112.1|	-	0.041	14.2	0.2	6.8	7.0	0.0	2.9	3	0	0	3	3	3	0	AAA	domain
Crp	PF00325.20	gi|289596416|ref|YP_003483112.1|	-	0.041	13.5	0.0	0.12	12.1	0.0	1.7	2	0	0	2	2	1	0	Bacterial	regulatory	proteins,	crp	family
HTH_5	PF01022.20	gi|289596416|ref|YP_003483112.1|	-	0.056	13.3	2.5	3.8	7.4	0.0	3.7	4	0	0	4	4	3	0	Bacterial	regulatory	protein,	arsR	family
AAA_11	PF13086.6	gi|289596416|ref|YP_003483112.1|	-	0.072	12.9	0.0	0.14	11.9	0.0	1.5	2	0	0	2	2	2	0	AAA	domain
GntR	PF00392.21	gi|289596416|ref|YP_003483112.1|	-	0.084	12.5	0.0	0.42	10.3	0.0	2.1	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
B-block_TFIIIC	PF04182.12	gi|289596416|ref|YP_003483112.1|	-	0.085	13.0	0.2	0.39	10.9	0.0	2.2	2	0	0	2	2	1	0	B-block	binding	subunit	of	TFIIIC
Hydrolase_6	PF13344.6	gi|289596416|ref|YP_003483112.1|	-	0.085	13.0	0.1	7.8	6.7	0.1	2.4	2	0	0	2	2	2	0	Haloacid	dehalogenase-like	hydrolase
ATP-synt_ab	PF00006.25	gi|289596416|ref|YP_003483112.1|	-	0.2	11.3	0.3	0.76	9.4	0.0	2.0	2	1	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_25	PF13481.6	gi|289596416|ref|YP_003483112.1|	-	0.21	11.2	0.0	0.53	9.8	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
Topo-VIb_trans	PF09239.11	gi|289596417|ref|YP_003483113.1|	-	3.3e-64	215.5	0.0	7.4e-64	214.4	0.0	1.6	1	0	0	1	1	1	1	Topoisomerase	VI	B	subunit,	transducer
HATPase_c_3	PF13589.6	gi|289596417|ref|YP_003483113.1|	-	5.7e-09	35.9	0.0	1.9e-08	34.2	0.0	1.8	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c	PF02518.26	gi|289596417|ref|YP_003483113.1|	-	1.8e-08	34.9	0.0	4.6e-08	33.5	0.0	1.7	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
Top6b_C	PF18000.1	gi|289596417|ref|YP_003483113.1|	-	7.8e-08	32.5	4.0	8.1e-08	32.4	0.9	2.7	2	1	0	2	2	2	1	Type	2	DNA	topoisomerase	6	subunit	B	C-terminal	domain
FbpA	PF05833.11	gi|289596417|ref|YP_003483113.1|	-	5.6e-06	25.4	0.0	1.4e-05	24.1	0.0	1.6	1	0	0	1	1	1	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
MAF_flag10	PF01973.18	gi|289596417|ref|YP_003483113.1|	-	0.019	14.7	0.1	0.092	12.4	0.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF115
TP6A_N	PF04406.14	gi|289596418|ref|YP_003483114.1|	-	7.4e-17	61.1	0.1	1.7e-16	60.0	0.1	1.5	1	0	0	1	1	1	1	Type	IIB	DNA	topoisomerase
DUF4047	PF13256.6	gi|289596418|ref|YP_003483114.1|	-	0.1	12.8	0.0	0.27	11.5	0.0	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4047)
DUF1344	PF07076.11	gi|289596419|ref|YP_003483115.1|	-	0.047	13.6	1.7	0.064	13.2	0.3	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1344)
DMRL_synthase	PF00885.19	gi|289596420|ref|YP_003483116.1|	-	1e-33	116.1	0.1	1.1e-33	116.0	0.1	1.0	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
Pox_E6	PF04656.12	gi|289596420|ref|YP_003483116.1|	-	0.058	11.8	0.1	0.07	11.6	0.1	1.0	1	0	0	1	1	1	0	Pox	virus	E6	protein
DMRL_synthase	PF00885.19	gi|289596421|ref|YP_003483117.1|	-	8.9e-16	58.0	0.0	1.1e-15	57.7	0.0	1.1	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
Nitro_FeMo-Co	PF02579.17	gi|289596421|ref|YP_003483117.1|	-	0.057	13.8	0.1	0.18	12.1	0.1	1.8	1	1	1	2	2	2	0	Dinitrogenase	iron-molybdenum	cofactor
CTP_transf_like	PF01467.26	gi|289596422|ref|YP_003483118.1|	-	1.5e-17	64.1	0.1	1.7e-17	64.0	0.1	1.1	1	0	0	1	1	1	1	Cytidylyltransferase-like
FAD_syn	PF06574.12	gi|289596422|ref|YP_003483118.1|	-	0.0031	17.4	0.2	0.16	11.8	0.0	2.2	2	0	0	2	2	2	2	FAD	synthetase
DUF498	PF04430.14	gi|289596422|ref|YP_003483118.1|	-	0.034	14.2	0.0	0.044	13.9	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF498/DUF598)
DHBP_synthase	PF00926.19	gi|289596423|ref|YP_003483119.1|	-	2e-55	187.3	0.0	2.4e-55	187.1	0.0	1.0	1	0	0	1	1	1	1	3,4-dihydroxy-2-butanone	4-phosphate	synthase
Ammonium_transp	PF00909.21	gi|289596424|ref|YP_003483120.1|	-	8.1e-107	357.3	35.9	9.2e-107	357.2	35.9	1.0	1	0	0	1	1	1	1	Ammonium	Transporter	Family
Phage_holin_2_3	PF16080.5	gi|289596424|ref|YP_003483120.1|	-	0.029	14.1	1.1	0.14	11.9	1.1	2.2	1	0	0	1	1	1	0	Bacteriophage	holin	family	HP1
Big_8	PF17961.1	gi|289596425|ref|YP_003483121.1|	-	0.068	13.3	5.6	1.1	9.4	0.1	3.0	2	1	1	3	3	3	0	Bacterial	Ig	domain
Sigma_reg_N	PF13800.6	gi|289596425|ref|YP_003483121.1|	-	0.077	13.3	0.2	0.22	11.8	0.2	1.7	1	0	0	1	1	1	0	Sigma	factor	regulator	N-terminal
DUF87	PF01935.17	gi|289596426|ref|YP_003483122.1|	-	3e-37	128.9	0.2	3e-37	128.9	0.2	1.7	2	0	0	2	2	2	1	Helicase	HerA,	central	domain
AAA_10	PF12846.7	gi|289596426|ref|YP_003483122.1|	-	0.00023	20.2	0.1	0.53	9.1	0.0	2.2	2	0	0	2	2	2	2	AAA-like	domain
FtsK_SpoIIIE	PF01580.18	gi|289596426|ref|YP_003483122.1|	-	0.00066	19.1	0.0	0.0013	18.2	0.0	1.4	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
TrwB_AAD_bind	PF10412.9	gi|289596426|ref|YP_003483122.1|	-	0.058	12.3	0.0	0.36	9.7	0.0	2.1	2	1	0	2	2	2	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
NurA	PF09376.10	gi|289596427|ref|YP_003483123.1|	-	0.0017	18.1	0.3	0.0097	15.6	0.1	2.1	2	1	0	2	2	2	1	NurA	domain
Glyco_tranf_2_3	PF13641.6	gi|289596428|ref|YP_003483124.1|	-	1.8e-27	96.7	0.0	2.4e-27	96.3	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.6	gi|289596428|ref|YP_003483124.1|	-	3.7e-19	69.4	15.8	3.7e-19	69.4	15.8	2.5	2	1	0	2	2	2	1	Glycosyl	transferase	family	group	2
Glycos_transf_2	PF00535.26	gi|289596428|ref|YP_003483124.1|	-	5.1e-17	62.2	0.0	8.2e-17	61.5	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.6	gi|289596428|ref|YP_003483124.1|	-	1.5e-16	60.4	0.0	2.4e-16	59.7	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Cellulose_synt	PF03552.14	gi|289596428|ref|YP_003483124.1|	-	2.1e-07	29.9	13.5	1.5e-06	27.1	10.7	2.3	1	1	1	2	2	2	2	Cellulose	synthase
GWT1	PF06423.12	gi|289596428|ref|YP_003483124.1|	-	0.0092	16.1	0.9	0.034	14.3	0.9	1.9	1	0	0	1	1	1	1	GWT1
Curto_V2	PF07325.11	gi|289596428|ref|YP_003483124.1|	-	0.24	11.3	0.1	0.24	11.3	0.1	3.4	3	1	1	4	4	4	0	Curtovirus	V2	protein
Rubrerythrin	PF02915.17	gi|289596428|ref|YP_003483124.1|	-	0.76	10.2	5.3	2.8	8.4	5.3	2.0	1	1	0	1	1	1	0	Rubrerythrin
Peptidase_M24	PF00557.24	gi|289596429|ref|YP_003483125.1|	-	1.4e-42	145.7	0.0	1.7e-42	145.5	0.0	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Sua5_yciO_yrdC	PF01300.18	gi|289596430|ref|YP_003483126.1|	-	1.5e-31	109.3	0.0	1.9e-31	109.0	0.0	1.1	1	0	0	1	1	1	1	Telomere	recombination
Radical_SAM	PF04055.21	gi|289596431|ref|YP_003483127.1|	-	6.6e-26	91.7	0.1	1.3e-24	87.4	0.0	2.2	2	0	0	2	2	2	1	Radical	SAM	superfamily
UPF0004	PF00919.20	gi|289596431|ref|YP_003483127.1|	-	1e-15	57.6	0.0	2e-15	56.6	0.0	1.5	1	0	0	1	1	1	1	Uncharacterized	protein	family	UPF0004
Phg_2220_C	PF09524.10	gi|289596431|ref|YP_003483127.1|	-	0.083	13.0	0.2	0.28	11.3	0.0	2.0	2	0	0	2	2	2	0	Conserved	phage	C-terminus	(Phg_2220_C)
DUF1450	PF07293.11	gi|289596431|ref|YP_003483127.1|	-	0.19	11.6	0.6	2.2	8.1	0.0	2.6	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1450)
SepF	PF04472.12	gi|289596432|ref|YP_003483128.1|	-	2.6e-14	53.2	0.1	3.5e-14	52.8	0.1	1.2	1	0	0	1	1	1	1	Cell	division	protein	SepF
NAD_kinase	PF01513.21	gi|289596433|ref|YP_003483129.1|	-	4.5e-50	170.5	0.0	5.2e-50	170.3	0.0	1.0	1	0	0	1	1	1	1	ATP-NAD	kinase
DAGK_cat	PF00781.24	gi|289596433|ref|YP_003483129.1|	-	5.7e-07	29.2	0.0	5.3e-06	26.1	0.0	2.4	2	0	0	2	2	2	1	Diacylglycerol	kinase	catalytic	domain
PFK	PF00365.20	gi|289596433|ref|YP_003483129.1|	-	0.0041	16.5	0.0	0.013	14.8	0.0	1.8	2	0	0	2	2	2	1	Phosphofructokinase
DeoRC	PF00455.22	gi|289596433|ref|YP_003483129.1|	-	0.026	14.5	0.0	0.15	12.0	0.0	2.1	2	0	0	2	2	2	0	DeoR	C	terminal	sensor	domain
Shikimate_DH	PF01488.20	gi|289596433|ref|YP_003483129.1|	-	0.028	14.5	0.1	0.27	11.3	0.1	2.5	2	1	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
Peripla_BP_4	PF13407.6	gi|289596433|ref|YP_003483129.1|	-	0.05	13.2	0.0	0.074	12.6	0.0	1.4	1	1	0	1	1	1	0	Periplasmic	binding	protein	domain
QRPTase_C	PF01729.19	gi|289596433|ref|YP_003483129.1|	-	0.071	12.9	0.0	0.14	11.9	0.0	1.6	1	0	0	1	1	1	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
DUF2483	PF10656.9	gi|289596433|ref|YP_003483129.1|	-	0.076	13.2	0.0	0.2	11.9	0.0	1.7	1	0	0	1	1	1	0	Hypothetical	protein	of	unknown	function	(DUF2483)
RrnaAD	PF00398.20	gi|289596434|ref|YP_003483130.1|	-	9.4e-57	192.1	0.0	1.2e-56	191.7	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_25	PF13649.6	gi|289596434|ref|YP_003483130.1|	-	9.7e-05	23.0	0.0	0.00016	22.3	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|289596434|ref|YP_003483130.1|	-	0.0032	18.1	0.0	0.0057	17.3	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
UPF0146	PF03686.13	gi|289596434|ref|YP_003483130.1|	-	0.054	13.4	0.2	0.2	11.5	0.1	1.8	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0146)
PCMT	PF01135.19	gi|289596434|ref|YP_003483130.1|	-	0.11	12.3	0.0	0.19	11.5	0.0	1.4	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_28	PF02636.17	gi|289596434|ref|YP_003483130.1|	-	0.11	12.1	0.0	0.26	10.9	0.0	1.6	2	0	0	2	2	2	0	Putative	S-adenosyl-L-methionine-dependent	methyltransferase
Methyltransf_23	PF13489.6	gi|289596434|ref|YP_003483130.1|	-	0.18	11.6	0.0	0.49	10.2	0.0	1.7	2	0	0	2	2	2	0	Methyltransferase	domain
PrmA	PF06325.13	gi|289596434|ref|YP_003483130.1|	-	0.24	10.8	0.0	0.36	10.2	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
PPC	PF04151.15	gi|289596436|ref|YP_003483132.1|	-	8.8e-07	29.9	11.1	0.0018	19.3	0.6	3.6	3	0	0	3	3	3	2	Bacterial	pre-peptidase	C-terminal	domain
CUB_2	PF02408.20	gi|289596436|ref|YP_003483132.1|	-	0.0005	19.8	4.6	1.2	8.9	0.1	3.6	3	1	0	3	3	3	2	CUB-like	domain
DUF4064	PF13273.6	gi|289596436|ref|YP_003483132.1|	-	0.003	17.8	2.9	0.03	14.6	0.4	2.5	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF4064)
PIG-Y	PF15159.6	gi|289596436|ref|YP_003483132.1|	-	0.0047	17.8	0.4	0.0047	17.8	0.4	2.4	3	0	0	3	3	3	1	Phosphatidylinositol	N-acetylglucosaminyltransferase	subunit	Y
MpPF26	PF07666.11	gi|289596436|ref|YP_003483132.1|	-	0.0079	16.3	1.7	0.0079	16.3	1.7	2.3	2	0	0	2	2	2	1	M	penetrans	paralogue	family	26
RIFIN	PF02009.16	gi|289596436|ref|YP_003483132.1|	-	0.011	15.7	0.8	0.017	15.1	0.8	1.2	1	0	0	1	1	1	0	Rifin
Baculo_11_kDa	PF06143.11	gi|289596436|ref|YP_003483132.1|	-	0.075	12.6	0.6	0.14	11.7	0.6	1.4	1	0	0	1	1	1	0	Baculovirus	11	kDa	family
ASFV_J13L	PF05568.11	gi|289596436|ref|YP_003483132.1|	-	0.11	12.3	1.0	0.29	10.9	1.0	1.7	1	0	0	1	1	1	0	African	swine	fever	virus	J13L	protein
ODV-E18	PF10717.9	gi|289596436|ref|YP_003483132.1|	-	0.15	11.9	0.9	0.34	10.8	0.9	1.5	1	0	0	1	1	1	0	Occlusion-derived	virus	envelope	protein	ODV-E18
DUF756	PF05506.12	gi|289596436|ref|YP_003483132.1|	-	0.17	12.8	0.6	54	4.8	0.0	3.8	2	1	0	3	3	3	0	Domain	of	unknown	function	(DUF756)
Cadherin-like	PF12733.7	gi|289596436|ref|YP_003483132.1|	-	0.22	12.1	12.2	1.4	9.5	0.6	3.3	3	1	0	3	3	3	0	Cadherin-like	beta	sandwich	domain
LTD	PF00932.19	gi|289596436|ref|YP_003483132.1|	-	0.33	11.3	4.3	10	6.5	0.8	2.9	1	1	1	2	2	2	0	Lamin	Tail	Domain
DUF1616	PF07760.11	gi|289596436|ref|YP_003483132.1|	-	0.81	9.0	10.8	1.7	8.0	1.3	3.0	2	2	0	2	2	2	0	Protein	of	unknown	function	(DUF1616)
7TM_GPCR_Srd	PF10317.9	gi|289596436|ref|YP_003483132.1|	-	0.87	8.7	7.1	0.031	13.5	1.1	1.5	2	0	0	2	2	2	0	Serpentine	type	7TM	GPCR	chemoreceptor	Srd
MazE_antitoxin	PF04014.18	gi|289596437|ref|YP_003483133.1|	-	0.00036	20.4	0.2	0.00045	20.1	0.2	1.1	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE,	bacterial	antitoxin
PrlF_antitoxin	PF15937.5	gi|289596437|ref|YP_003483133.1|	-	0.023	15.1	0.0	0.026	15.0	0.0	1.0	1	0	0	1	1	1	0	prlF	antitoxin	for	toxin	YhaV_toxin
DUF655	PF04919.12	gi|289596438|ref|YP_003483134.1|	-	2.5e-68	229.6	2.5	2.8e-68	229.4	2.5	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF655)
HHH_6	PF14579.6	gi|289596438|ref|YP_003483134.1|	-	2.6e-06	27.6	0.0	9.6e-06	25.8	0.0	1.8	1	1	1	2	2	2	1	Helix-hairpin-helix	motif
HHH_3	PF12836.7	gi|289596438|ref|YP_003483134.1|	-	0.00039	20.6	0.0	0.0011	19.1	0.0	1.7	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
A_thal_3526	PF09713.10	gi|289596438|ref|YP_003483134.1|	-	0.37	11.1	2.4	25	5.2	0.0	3.3	2	1	0	2	2	2	0	Plant	protein	1589	of	unknown	function	(A_thal_3526)
RNA_pol_Rpb4	PF03874.16	gi|289596439|ref|YP_003483135.1|	-	1.4e-07	31.8	3.0	1.1e-06	29.0	3.0	1.9	1	1	0	1	1	1	1	RNA	polymerase	Rpb4
Ribosomal_L21e	PF01157.18	gi|289596440|ref|YP_003483136.1|	-	5.1e-32	109.7	6.0	5.6e-32	109.6	6.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L21e
DDE_Tnp_1	PF01609.21	gi|289596441|ref|YP_003483137.1|	-	1.3e-22	80.6	0.3	2.5e-22	79.6	0.3	1.5	1	0	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1_6	PF13751.6	gi|289596441|ref|YP_003483137.1|	-	0.0028	17.9	0.1	0.0078	16.4	0.0	1.8	2	0	0	2	2	2	1	Transposase	DDE	domain
DUF772	PF05598.11	gi|289596441|ref|YP_003483137.1|	-	0.01	15.8	0.3	0.022	14.7	0.3	1.5	1	0	0	1	1	1	0	Transposase	domain	(DUF772)
UbiD	PF01977.16	gi|289596442|ref|YP_003483138.1|	-	4.4e-81	272.8	0.0	5.3e-81	272.6	0.0	1.0	1	0	0	1	1	1	1	3-octaprenyl-4-hydroxybenzoate	carboxy-lyase
ATP_bind_3	PF01171.20	gi|289596443|ref|YP_003483139.1|	-	6.8e-17	61.8	0.0	2e-16	60.3	0.0	1.7	1	1	1	2	2	2	1	PP-loop	family
PAPS_reduct	PF01507.19	gi|289596443|ref|YP_003483139.1|	-	1.3e-07	31.8	0.0	2.6e-07	30.8	0.0	1.5	1	1	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
tRNA_Me_trans	PF03054.16	gi|289596443|ref|YP_003483139.1|	-	0.00011	21.2	0.0	0.00037	19.4	0.0	1.8	1	1	0	1	1	1	1	tRNA	methyl	transferase
RecR	PF02132.15	gi|289596443|ref|YP_003483139.1|	-	0.0013	18.3	0.8	0.0013	18.3	0.8	3.1	3	0	0	3	3	3	1	RecR	protein
Arginosuc_synth	PF00764.19	gi|289596443|ref|YP_003483139.1|	-	0.028	13.7	0.0	0.04	13.2	0.0	1.2	1	0	0	1	1	1	0	Arginosuccinate	synthase
QueH	PF02677.14	gi|289596443|ref|YP_003483139.1|	-	0.033	14.3	0.0	0.087	12.9	0.0	1.7	1	0	0	1	1	1	0	Epoxyqueuosine	reductase	QueH
zf-C4	PF00105.18	gi|289596443|ref|YP_003483139.1|	-	0.17	12.4	0.1	0.17	12.4	0.1	3.6	5	0	0	5	5	5	0	Zinc	finger,	C4	type	(two	domains)
Cas_Cas02710	PF09670.10	gi|289596443|ref|YP_003483139.1|	-	0.18	10.6	0.0	0.29	9.9	0.0	1.2	1	0	0	1	1	1	0	CRISPR-associated	protein	(Cas_Cas02710)
zf-ribbon_3	PF13248.6	gi|289596443|ref|YP_003483139.1|	-	5.5	6.5	11.2	3.7	7.1	0.9	3.6	4	0	0	4	4	4	0	zinc-ribbon	domain
RNase_P_Rpp14	PF01900.19	gi|289596444|ref|YP_003483140.1|	-	0.029	14.6	0.5	0.27	11.5	0.3	2.2	1	1	0	1	1	1	0	Rpp14/Pop5	family
PcrB	PF01884.17	gi|289596445|ref|YP_003483141.1|	-	9.2e-65	218.3	2.3	1.2e-64	217.9	2.3	1.0	1	0	0	1	1	1	1	PcrB	family
His_biosynth	PF00977.21	gi|289596445|ref|YP_003483141.1|	-	1.2e-09	37.9	0.5	1.4e-08	34.5	0.1	2.1	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
G3P_antiterm	PF04309.12	gi|289596445|ref|YP_003483141.1|	-	3.4e-05	23.3	0.4	0.00012	21.5	0.1	2.0	1	1	1	2	2	2	1	Glycerol-3-phosphate	responsive	antiterminator
ThiG	PF05690.14	gi|289596445|ref|YP_003483141.1|	-	9.2e-05	21.9	0.8	9.2e-05	21.9	0.8	2.6	1	1	2	3	3	3	1	Thiazole	biosynthesis	protein	ThiG
Trp_syntA	PF00290.20	gi|289596445|ref|YP_003483141.1|	-	9.3e-05	21.4	0.9	0.00025	20.0	0.5	1.8	2	0	0	2	2	2	1	Tryptophan	synthase	alpha	chain
DHO_dh	PF01180.21	gi|289596445|ref|YP_003483141.1|	-	0.00024	20.4	0.4	0.0011	18.3	0.1	1.9	2	0	0	2	2	2	1	Dihydroorotate	dehydrogenase
Dus	PF01207.17	gi|289596445|ref|YP_003483141.1|	-	0.0011	18.1	0.2	0.032	13.3	0.1	2.2	2	0	0	2	2	2	1	Dihydrouridine	synthase	(Dus)
TMP-TENI	PF02581.17	gi|289596445|ref|YP_003483141.1|	-	0.0023	17.3	0.3	0.0084	15.5	0.1	1.8	2	0	0	2	2	2	1	Thiamine	monophosphate	synthase
PucR	PF07905.11	gi|289596445|ref|YP_003483141.1|	-	0.0035	17.6	0.2	0.026	14.8	0.0	2.2	2	1	0	2	2	2	1	Purine	catabolism	regulatory	protein-like	family
IMPDH	PF00478.25	gi|289596445|ref|YP_003483141.1|	-	0.0041	16.2	0.5	0.018	14.1	0.2	1.9	2	0	0	2	2	2	1	IMP	dehydrogenase	/	GMP	reductase	domain
NanE	PF04131.14	gi|289596445|ref|YP_003483141.1|	-	0.0046	16.2	0.9	0.37	9.9	0.1	2.4	2	0	0	2	2	2	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
FMN_dh	PF01070.18	gi|289596445|ref|YP_003483141.1|	-	0.013	14.5	0.2	0.042	12.9	0.1	1.8	2	0	0	2	2	2	0	FMN-dependent	dehydrogenase
Ribul_P_3_epim	PF00834.19	gi|289596445|ref|YP_003483141.1|	-	0.036	13.5	0.1	0.07	12.5	0.1	1.5	1	0	0	1	1	1	0	Ribulose-phosphate	3	epimerase	family
NMO	PF03060.15	gi|289596445|ref|YP_003483141.1|	-	0.054	12.9	1.2	0.11	11.9	0.3	2.0	2	0	0	2	2	2	0	Nitronate	monooxygenase
DUF561	PF04481.12	gi|289596445|ref|YP_003483141.1|	-	0.068	12.3	1.3	0.092	11.9	0.3	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF561)
UbiA	PF01040.18	gi|289596446|ref|YP_003483142.1|	-	3.7e-36	124.7	10.9	4.4e-36	124.5	10.9	1.1	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
Radical_SAM	PF04055.21	gi|289596447|ref|YP_003483143.1|	-	3.5e-07	30.8	0.5	3.3e-06	27.6	0.1	2.2	1	1	1	2	2	2	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|289596447|ref|YP_003483143.1|	-	2.1e-06	27.9	0.0	5e-06	26.6	0.0	1.6	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Proton_antipo_M	PF00361.20	gi|289596448|ref|YP_003483144.1|	-	3e-30	105.4	29.8	3e-30	105.4	29.8	2.6	1	1	1	2	2	2	1	Proton-conducting	membrane	transporter
Oxidored_q6	PF01058.22	gi|289596449|ref|YP_003483145.1|	-	5.8e-14	52.0	0.1	1.6e-07	31.2	0.0	2.3	1	1	1	2	2	2	2	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
PGK	PF00162.19	gi|289596449|ref|YP_003483145.1|	-	0.089	11.7	0.0	1.1	8.2	0.1	1.9	2	0	0	2	2	2	0	Phosphoglycerate	kinase
Complex1_49kDa	PF00346.19	gi|289596450|ref|YP_003483146.1|	-	2.4e-16	59.7	0.0	1.6e-13	50.4	0.0	2.2	1	1	1	2	2	2	2	Respiratory-chain	NADH	dehydrogenase,	49	Kd	subunit
Proton_antipo_M	PF00361.20	gi|289596451|ref|YP_003483147.1|	-	8.2e-38	130.3	27.3	8.2e-38	130.3	27.3	2.3	2	0	0	2	2	2	1	Proton-conducting	membrane	transporter
Proton_antipo_C	PF01010.19	gi|289596452|ref|YP_003483148.1|	-	0.037	13.7	1.8	0.054	13.1	1.8	1.2	1	0	0	1	1	1	0	NADH-dehyrogenase	subunit	F,	TMs,	(complex	I)	C-terminus
Sulf_transp	PF04143.14	gi|289596452|ref|YP_003483148.1|	-	0.24	10.9	10.7	0.38	10.3	10.7	1.3	1	1	0	1	1	1	0	Sulphur	transport
DUF2933	PF11666.8	gi|289596452|ref|YP_003483148.1|	-	1.7	8.7	7.6	0.23	11.5	0.5	2.9	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2933)
DUF2070	PF09843.9	gi|289596452|ref|YP_003483148.1|	-	2.2	6.5	14.1	2.8	6.1	14.1	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
S_4TM	PF18159.1	gi|289596452|ref|YP_003483148.1|	-	3.2	7.0	8.6	1.4	8.1	1.4	2.2	2	0	0	2	2	2	0	SMODS-associating	4TM	effector	domain
NADHdh	PF00146.21	gi|289596453|ref|YP_003483149.1|	-	2.4e-31	109.1	23.6	3.1e-31	108.8	23.6	1.0	1	0	0	1	1	1	1	NADH	dehydrogenase
NosD	PF05048.13	gi|289596454|ref|YP_003483150.1|	-	2.4e-29	102.3	50.6	5.6e-27	94.6	29.1	4.6	3	2	3	6	6	4	2	Periplasmic	copper-binding	protein	(NosD)
Big_7	PF17957.1	gi|289596454|ref|YP_003483150.1|	-	2.1e-21	76.5	48.8	2.2e-06	28.3	2.7	7.9	6	2	1	7	7	6	5	Bacterial	Ig	domain
Y_Y_Y	PF07495.13	gi|289596454|ref|YP_003483150.1|	-	1.2e-12	47.6	24.5	0.00095	19.1	0.6	5.3	5	0	0	5	5	4	4	Y_Y_Y	domain
Big_3_3	PF13750.6	gi|289596454|ref|YP_003483150.1|	-	1.5e-12	47.4	15.9	0.032	13.9	0.3	5.7	5	0	0	5	5	5	4	Bacterial	Ig-like	domain	(group	3)
Beta_helix	PF13229.6	gi|289596454|ref|YP_003483150.1|	-	4.3e-11	42.9	53.6	7.6e-08	32.4	25.1	6.1	4	2	1	6	6	4	2	Right	handed	beta	helix	region
Peptidase_C1	PF00112.23	gi|289596454|ref|YP_003483150.1|	-	1.6e-09	38.2	3.5	3.9e-09	36.9	3.5	1.6	1	0	0	1	1	1	1	Papain	family	cysteine	protease
DUF4625	PF15418.6	gi|289596454|ref|YP_003483150.1|	-	1.8e-05	25.0	9.6	4.5	7.5	0.1	7.1	2	2	5	7	7	7	1	Domain	of	unknown	function	(DUF4625)
HYR	PF02494.16	gi|289596454|ref|YP_003483150.1|	-	6.7e-05	23.1	24.5	0.25	11.7	0.9	7.6	3	2	3	6	6	6	3	HYR	domain
LIFR_N	PF18207.1	gi|289596454|ref|YP_003483150.1|	-	0.0019	18.5	0.2	0.16	12.4	0.1	3.6	3	0	0	3	3	3	1	Leukemia	inhibitory	factor	receptor	N-terminal	domain
DUF2271	PF10029.9	gi|289596454|ref|YP_003483150.1|	-	0.0048	16.5	0.3	9.6	5.9	0.1	3.8	3	0	0	3	3	3	0	Predicted	periplasmic	protein	(DUF2271)
DUF4399	PF14347.6	gi|289596454|ref|YP_003483150.1|	-	0.0054	17.1	0.0	3	8.3	0.0	3.9	5	0	0	5	5	3	1	Domain	of	unknown	function	(DUF4399)
PolyG_pol	PF01518.16	gi|289596454|ref|YP_003483150.1|	-	0.0084	14.8	0.1	0.18	10.5	0.0	2.2	2	0	0	2	2	2	1	Sigma	NS	protein
DUF3169	PF11368.8	gi|289596454|ref|YP_003483150.1|	-	0.031	13.8	2.8	0.034	13.7	0.3	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3169)
PKD_3	PF16820.5	gi|289596454|ref|YP_003483150.1|	-	0.054	13.3	7.9	4.5	7.1	0.9	4.9	4	1	0	4	4	4	0	PKD-like	domain
ChitinaseA_N	PF08329.10	gi|289596454|ref|YP_003483150.1|	-	0.074	12.7	9.2	0.2	11.3	0.8	3.6	2	1	1	3	3	3	0	Chitinase	A,	N-terminal	domain
Adeno_E1B_55K	PF01696.17	gi|289596454|ref|YP_003483150.1|	-	0.093	11.4	0.4	0.16	10.6	0.4	1.2	1	0	0	1	1	1	0	Adenovirus	EB1	55K	protein	/	large	t-antigen
DUF5385	PF17359.2	gi|289596454|ref|YP_003483150.1|	-	0.12	11.9	1.2	0.23	11.0	1.2	1.3	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5385)
FAM176	PF14851.6	gi|289596454|ref|YP_003483150.1|	-	0.13	11.9	0.2	0.21	11.3	0.2	1.3	1	0	0	1	1	1	0	FAM176	family
Spore_YhaL	PF14147.6	gi|289596454|ref|YP_003483150.1|	-	0.5	10.1	4.0	20	5.0	1.5	2.5	2	0	0	2	2	2	0	Sporulation	protein	YhaL
OAD_gamma	PF04277.13	gi|289596454|ref|YP_003483150.1|	-	0.53	10.9	2.4	0.45	11.1	0.3	2.0	2	0	0	2	2	2	0	Oxaloacetate	decarboxylase,	gamma	chain
Cadherin-like	PF12733.7	gi|289596454|ref|YP_003483150.1|	-	1.1	9.8	15.5	0.037	14.5	2.3	4.4	1	1	2	3	3	3	0	Cadherin-like	beta	sandwich	domain
PNP_UDP_1	PF01048.20	gi|289596455|ref|YP_003483151.1|	-	2.3e-36	125.3	0.0	2.9e-36	124.9	0.0	1.1	1	0	0	1	1	1	1	Phosphorylase	superfamily
PSDC	PF12588.8	gi|289596455|ref|YP_003483151.1|	-	0.1	12.6	0.0	0.14	12.2	0.0	1.3	1	0	0	1	1	1	0	Phophatidylserine	decarboxylase
GCHY-1	PF02649.14	gi|289596456|ref|YP_003483152.1|	-	1.9e-80	270.2	0.3	2.1e-80	270.0	0.3	1.0	1	0	0	1	1	1	1	Type	I	GTP	cyclohydrolase	folE2
FolB	PF02152.18	gi|289596456|ref|YP_003483152.1|	-	4.7e-05	23.9	0.7	0.014	15.9	0.0	2.5	2	1	0	2	2	2	2	Dihydroneopterin	aldolase
REF	PF05755.12	gi|289596456|ref|YP_003483152.1|	-	0.017	14.9	0.3	0.49	10.2	0.0	2.3	2	0	0	2	2	2	0	Rubber	elongation	factor	protein	(REF)
EKR	PF10371.9	gi|289596456|ref|YP_003483152.1|	-	0.062	13.1	0.3	22	4.9	0.0	2.9	3	0	0	3	3	3	0	Domain	of	unknown	function
Peptidase_M16	PF00675.20	gi|289596457|ref|YP_003483153.1|	-	3.1e-18	66.2	0.0	2.3e-17	63.4	0.0	2.0	2	0	0	2	2	2	1	Insulinase	(Peptidase	family	M16)
Peptidase_M16_C	PF05193.21	gi|289596457|ref|YP_003483153.1|	-	9.7e-07	29.0	0.0	0.00014	21.9	0.0	2.3	1	1	1	2	2	2	2	Peptidase	M16	inactive	domain
ANAPC9	PF12856.7	gi|289596457|ref|YP_003483153.1|	-	0.12	12.5	0.0	0.23	11.7	0.0	1.4	1	0	0	1	1	1	0	Anaphase-promoting	complex	subunit	9
ABC_tran	PF00005.27	gi|289596459|ref|YP_003483155.1|	-	4.6e-22	79.0	0.0	8.5e-22	78.1	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|289596459|ref|YP_003483155.1|	-	4.9e-12	46.3	5.5	3.9e-06	26.9	0.2	2.4	2	1	1	3	3	3	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|289596459|ref|YP_003483155.1|	-	0.00022	20.8	0.1	0.13	11.7	0.1	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.6	gi|289596459|ref|YP_003483155.1|	-	0.00028	21.5	2.2	0.00057	20.4	2.1	1.7	1	1	0	1	1	1	1	AAA	domain
Mg_chelatase	PF01078.21	gi|289596459|ref|YP_003483155.1|	-	0.0017	17.8	0.0	0.0044	16.4	0.0	1.6	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_33	PF13671.6	gi|289596459|ref|YP_003483155.1|	-	0.0034	17.5	0.0	0.0056	16.8	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_29	PF13555.6	gi|289596459|ref|YP_003483155.1|	-	0.0045	16.7	0.0	0.0087	15.8	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA	PF00004.29	gi|289596459|ref|YP_003483155.1|	-	0.0064	16.9	0.0	0.018	15.5	0.0	1.9	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
cobW	PF02492.19	gi|289596459|ref|YP_003483155.1|	-	0.015	14.9	0.3	0.032	13.8	0.1	1.6	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_18	PF13238.6	gi|289596459|ref|YP_003483155.1|	-	0.02	15.5	0.1	0.06	13.9	0.0	1.9	2	1	0	2	2	2	0	AAA	domain
AAA_30	PF13604.6	gi|289596459|ref|YP_003483155.1|	-	0.051	13.3	0.0	0.11	12.2	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
RsgA_GTPase	PF03193.16	gi|289596459|ref|YP_003483155.1|	-	0.061	13.2	0.0	0.11	12.4	0.0	1.4	1	0	0	1	1	1	0	RsgA	GTPase
AAA_22	PF13401.6	gi|289596459|ref|YP_003483155.1|	-	0.066	13.5	0.2	0.19	12.0	0.2	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_24	PF13479.6	gi|289596459|ref|YP_003483155.1|	-	0.086	12.6	0.0	0.13	12.0	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_15	PF13175.6	gi|289596459|ref|YP_003483155.1|	-	0.1	12.3	4.7	0.44	10.2	0.2	2.5	1	1	1	3	3	3	0	AAA	ATPase	domain
TsaE	PF02367.17	gi|289596459|ref|YP_003483155.1|	-	0.12	12.4	0.0	0.31	11.1	0.0	1.6	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_27	PF13514.6	gi|289596459|ref|YP_003483155.1|	-	0.16	11.5	0.0	0.31	10.6	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_19	PF13245.6	gi|289596459|ref|YP_003483155.1|	-	0.25	11.7	0.3	0.84	10.0	0.0	1.9	2	1	0	2	2	2	0	AAA	domain
ABC2_membrane_2	PF12679.7	gi|289596460|ref|YP_003483156.1|	-	4.9e-08	32.6	14.7	4.9e-08	32.6	14.7	1.8	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.7	gi|289596460|ref|YP_003483156.1|	-	1.3e-06	28.5	16.5	1.3e-06	28.5	16.5	2.2	1	1	1	2	2	2	2	ABC-2	family	transporter	protein
ThiC_Rad_SAM	PF01964.18	gi|289596462|ref|YP_003483158.1|	-	1.7e-184	613.4	0.4	1.9e-184	613.3	0.4	1.0	1	0	0	1	1	1	1	Radical	SAM	ThiC	family
DUF3606	PF12244.8	gi|289596462|ref|YP_003483158.1|	-	0.12	12.4	0.0	0.4	10.7	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3606)
Rhomboid	PF01694.22	gi|289596463|ref|YP_003483159.1|	-	3.6e-24	85.5	17.3	3.6e-24	85.5	17.3	1.7	2	0	0	2	2	2	1	Rhomboid	family
RTC	PF01137.21	gi|289596464|ref|YP_003483160.1|	-	6.1e-78	261.0	0.0	7.4e-78	260.8	0.0	1.0	1	0	0	1	1	1	1	RNA	3'-terminal	phosphate	cyclase
RTC_insert	PF05189.13	gi|289596464|ref|YP_003483160.1|	-	1.9e-05	25.1	0.0	4.1e-05	24.0	0.0	1.6	1	0	0	1	1	1	1	RNA	3'-terminal	phosphate	cyclase	(RTC),	insert	domain
NCD1	PF04904.13	gi|289596464|ref|YP_003483160.1|	-	0.016	15.2	0.0	0.033	14.2	0.0	1.5	1	0	0	1	1	1	0	NAB	conserved	region	1	(NCD1)
DUF3418	PF11898.8	gi|289596464|ref|YP_003483160.1|	-	0.1	11.2	0.0	0.13	10.9	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3418)
PAC2	PF09754.9	gi|289596465|ref|YP_003483161.1|	-	1.2e-40	139.8	0.1	1.4e-40	139.6	0.1	1.0	1	0	0	1	1	1	1	PAC2	family
CTP_synth_N	PF06418.14	gi|289596466|ref|YP_003483162.1|	-	3e-128	426.7	2.2	4.3e-128	426.2	2.2	1.2	1	0	0	1	1	1	1	CTP	synthase	N-terminus
GATase	PF00117.28	gi|289596466|ref|YP_003483162.1|	-	8e-55	185.6	0.0	1.7e-54	184.5	0.0	1.5	2	0	0	2	2	2	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.13	gi|289596466|ref|YP_003483162.1|	-	9.5e-07	28.8	0.0	5.9e-06	26.2	0.0	2.1	1	1	1	2	2	2	1	Peptidase	C26
CbiA	PF01656.23	gi|289596466|ref|YP_003483162.1|	-	0.0016	18.5	0.0	0.0033	17.5	0.0	1.6	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
MeaB	PF03308.16	gi|289596466|ref|YP_003483162.1|	-	0.084	11.8	0.2	0.15	11.0	0.2	1.3	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
Glycos_transf_1	PF00534.20	gi|289596467|ref|YP_003483163.1|	-	1.7e-41	141.6	0.0	2.4e-41	141.1	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.6	gi|289596467|ref|YP_003483163.1|	-	5.7e-29	101.3	0.0	9.4e-29	100.5	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.6	gi|289596467|ref|YP_003483163.1|	-	1.4e-23	83.8	0.3	2.7e-23	82.8	0.1	1.7	2	0	0	2	2	2	1	Glycosyltransferase	Family	4
Glyco_trans_4_4	PF13579.6	gi|289596467|ref|YP_003483163.1|	-	1e-10	42.3	0.0	4.1e-10	40.3	0.0	1.9	1	1	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_1_2	PF13524.6	gi|289596467|ref|YP_003483163.1|	-	4e-09	36.8	0.0	7.6e-09	35.8	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Epimerase_2	PF02350.19	gi|289596467|ref|YP_003483163.1|	-	0.0025	16.7	0.0	0.015	14.1	0.0	1.9	1	1	0	1	1	1	1	UDP-N-acetylglucosamine	2-epimerase
Glyco_trans_4_2	PF13477.6	gi|289596467|ref|YP_003483163.1|	-	0.0029	17.6	0.2	0.0061	16.6	0.2	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	4-like
Glyco_transf_5	PF08323.11	gi|289596467|ref|YP_003483163.1|	-	0.026	14.2	0.4	0.36	10.5	0.2	2.1	1	1	1	2	2	2	0	Starch	synthase	catalytic	domain
DDE_Tnp_1	PF01609.21	gi|289596468|ref|YP_003483164.1|	-	2e-22	79.9	1.4	2.5e-22	79.6	0.3	1.7	2	0	0	2	2	2	1	Transposase	DDE	domain
DDE_Tnp_1_6	PF13751.6	gi|289596468|ref|YP_003483164.1|	-	0.0029	17.8	0.1	0.0078	16.4	0.0	1.8	2	0	0	2	2	2	1	Transposase	DDE	domain
DUF772	PF05598.11	gi|289596468|ref|YP_003483164.1|	-	0.0067	16.4	0.5	0.015	15.3	0.5	1.5	1	0	0	1	1	1	1	Transposase	domain	(DUF772)
Phage_GPA	PF05840.13	gi|289596468|ref|YP_003483164.1|	-	0.074	12.1	0.2	0.12	11.5	0.2	1.3	1	0	0	1	1	1	0	Bacteriophage	replication	gene	A	protein	(GPA)
SBP_bac_5	PF00496.22	gi|289596469|ref|YP_003483165.1|	-	3.8e-72	243.4	6.8	1.1e-71	241.8	6.8	1.7	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
Big_1	PF02369.16	gi|289596469|ref|YP_003483165.1|	-	1.3e-26	92.4	46.6	3.5e-08	33.3	1.1	8.9	8	1	0	8	8	7	5	Bacterial	Ig-like	domain	(group	1)
MG4	PF17789.1	gi|289596469|ref|YP_003483165.1|	-	7.5e-20	70.9	10.3	3.3e-05	24.0	0.3	7.1	7	0	0	7	7	6	4	Macroglobulin	domain	MG4
DUF4198	PF10670.9	gi|289596469|ref|YP_003483165.1|	-	1.6e-08	35.2	4.6	0.077	13.4	0.0	5.5	6	0	0	6	6	5	2	Domain	of	unknown	function	(DUF4198)
CarboxypepD_reg	PF13620.6	gi|289596469|ref|YP_003483165.1|	-	6.5e-08	32.7	35.4	0.012	15.8	0.2	8.2	8	1	0	8	8	6	3	Carboxypeptidase	regulatory-like	domain
Invasin_D3	PF09134.10	gi|289596469|ref|YP_003483165.1|	-	3.7e-06	27.2	27.5	0.21	11.9	1.7	7.3	7	1	0	7	7	7	3	Invasin,	domain	3
ZirS_C	PF16583.5	gi|289596469|ref|YP_003483165.1|	-	2.4e-05	24.0	5.6	0.0013	18.3	0.1	3.8	2	1	2	4	4	4	1	Zinc-regulated	secreted	antivirulence	protein	C-terminal	domain
EMP24_GP25L	PF01105.24	gi|289596469|ref|YP_003483165.1|	-	0.0029	17.6	0.0	0.0029	17.6	0.0	2.4	3	0	0	3	3	2	1	emp24/gp25L/p24	family/GOLD
DUF3169	PF11368.8	gi|289596469|ref|YP_003483165.1|	-	0.0048	16.5	0.3	0.0093	15.5	0.3	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3169)
Arrestin_C	PF02752.22	gi|289596469|ref|YP_003483165.1|	-	0.0062	17.0	0.3	20	5.6	0.1	3.8	3	0	0	3	3	3	0	Arrestin	(or	S-antigen),	C-terminal	domain
Spc29	PF17082.5	gi|289596469|ref|YP_003483165.1|	-	0.0062	16.4	0.4	0.012	15.5	0.4	1.4	1	0	0	1	1	1	1	Spindle	Pole	Component	29
MscS_porin	PF12795.7	gi|289596469|ref|YP_003483165.1|	-	0.0062	16.1	3.9	0.013	15.1	3.9	1.4	1	0	0	1	1	1	1	Mechanosensitive	ion	channel	porin	domain
DUF4472	PF14739.6	gi|289596469|ref|YP_003483165.1|	-	0.0064	17.2	1.6	0.0064	17.2	1.6	2.3	2	0	0	2	2	1	1	Domain	of	unknown	function	(DUF4472)
DUF824	PF05688.11	gi|289596469|ref|YP_003483165.1|	-	0.0082	16.0	0.6	0.0082	16.0	0.6	5.0	6	0	0	6	6	4	2	Salmonella	repeat	of	unknown	function	(DUF824)
Fib_alpha	PF08702.10	gi|289596469|ref|YP_003483165.1|	-	0.018	15.2	1.9	0.04	14.1	1.9	1.5	1	0	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
MG3	PF17791.1	gi|289596469|ref|YP_003483165.1|	-	0.019	15.2	3.5	1.5	9.1	0.2	3.7	4	0	0	4	4	3	0	Macroglobulin	domain	MG3
SlyX	PF04102.12	gi|289596469|ref|YP_003483165.1|	-	0.035	14.7	0.7	0.087	13.4	0.7	1.6	1	0	0	1	1	1	0	SlyX
Peptidase_M56	PF05569.11	gi|289596469|ref|YP_003483165.1|	-	0.045	12.9	0.3	0.087	12.0	0.3	1.4	1	0	0	1	1	1	0	BlaR1	peptidase	M56
Orf78	PF06024.12	gi|289596469|ref|YP_003483165.1|	-	0.057	13.7	0.3	0.14	12.5	0.3	1.7	1	0	0	1	1	1	0	Orf78	(ac78)
Dioxygenase_C	PF00775.21	gi|289596469|ref|YP_003483165.1|	-	0.085	12.3	0.3	42	3.5	0.0	3.9	4	0	0	4	4	4	0	Dioxygenase
Sec34	PF04136.15	gi|289596469|ref|YP_003483165.1|	-	0.099	12.5	3.8	0.21	11.5	3.8	1.4	1	0	0	1	1	1	0	Sec34-like	family
OAD_gamma	PF04277.13	gi|289596469|ref|YP_003483165.1|	-	0.14	12.8	0.4	0.35	11.5	0.1	1.7	2	0	0	2	2	1	0	Oxaloacetate	decarboxylase,	gamma	chain
DUF4407	PF14362.6	gi|289596469|ref|YP_003483165.1|	-	0.19	11.1	4.7	0.28	10.5	4.7	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
HALZ	PF02183.18	gi|289596469|ref|YP_003483165.1|	-	0.21	11.8	2.3	0.51	10.6	2.3	1.6	1	0	0	1	1	1	0	Homeobox	associated	leucine	zipper
TolA_bind_tri	PF16331.5	gi|289596469|ref|YP_003483165.1|	-	0.22	11.6	2.2	0.39	10.8	2.2	1.4	1	0	0	1	1	1	0	TolA	binding	protein	trimerisation
Fmp27_WPPW	PF10359.9	gi|289596469|ref|YP_003483165.1|	-	0.29	10.0	6.1	0.48	9.2	6.1	1.2	1	0	0	1	1	1	0	RNA	pol	II	promoter	Fmp27	protein	domain
GIT_CC	PF16559.5	gi|289596469|ref|YP_003483165.1|	-	0.29	11.0	5.5	0.68	9.8	5.5	1.6	1	0	0	1	1	1	0	GIT	coiled-coil	Rho	guanine	nucleotide	exchange	factor
Uds1	PF15456.6	gi|289596469|ref|YP_003483165.1|	-	0.33	11.1	2.6	0.54	10.4	2.6	1.2	1	0	0	1	1	1	0	Up-regulated	During	Septation
DUF4446	PF14584.6	gi|289596469|ref|YP_003483165.1|	-	0.35	10.8	5.1	10	6.1	0.1	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4446)
Laminin_II	PF06009.12	gi|289596469|ref|YP_003483165.1|	-	0.42	10.6	2.3	1.2	9.1	2.3	1.7	1	0	0	1	1	1	0	Laminin	Domain	II
AATF-Che1	PF13339.6	gi|289596469|ref|YP_003483165.1|	-	3.1	8.5	5.4	5.8	7.6	5.4	1.3	1	0	0	1	1	1	0	Apoptosis	antagonizing	transcription	factor
NPV_P10	PF05531.12	gi|289596469|ref|YP_003483165.1|	-	5	7.7	5.9	5.8	7.5	1.2	3.1	2	1	1	3	3	3	0	Nucleopolyhedrovirus	P10	protein
DivIC	PF04977.15	gi|289596469|ref|YP_003483165.1|	-	7.2	6.5	10.8	0.24	11.2	4.0	2.1	3	0	0	3	3	1	0	Septum	formation	initiator
TbpB_A	PF17484.2	gi|289596469|ref|YP_003483165.1|	-	8.6	7.1	10.7	0.073	13.8	1.5	2.1	1	1	1	2	2	1	0	N-Lobe	handle	Tf-binding	protein	B
FliD_N	PF02465.18	gi|289596469|ref|YP_003483165.1|	-	8.6	7.1	18.1	0.79	10.5	4.9	4.2	4	0	0	4	4	4	0	Flagellar	hook-associated	protein	2	N-terminus
tRNA_synthFbeta	PF17759.1	gi|289596470|ref|YP_003483166.1|	-	1.1e-40	139.4	0.0	1.9e-40	138.6	0.0	1.4	1	0	0	1	1	1	1	Phenylalanyl	tRNA	synthetase	beta	chain	CLM	domain
B5	PF03484.15	gi|289596470|ref|YP_003483166.1|	-	7.3e-18	64.6	2.8	4.8e-16	58.8	0.4	3.8	4	0	0	4	4	4	1	tRNA	synthetase	B5	domain
B3_4	PF03483.17	gi|289596470|ref|YP_003483166.1|	-	2.3e-15	56.7	0.0	4.3e-15	55.8	0.0	1.4	1	0	0	1	1	1	1	B3/4	domain
PhetRS_B1	PF18262.1	gi|289596470|ref|YP_003483166.1|	-	0.0003	20.9	0.3	0.45	10.8	0.0	3.5	2	1	0	2	2	2	2	Phe-tRNA	synthetase	beta	subunit	B1	domain
tRNA-synt_2d	PF01409.20	gi|289596470|ref|YP_003483166.1|	-	0.0075	15.8	0.1	0.028	13.9	0.1	1.9	1	1	0	1	1	1	1	tRNA	synthetases	class	II	core	domain	(F)
LDcluster4	PF18306.1	gi|289596471|ref|YP_003483167.1|	-	1.5e-44	151.3	0.5	1.8e-44	151.1	0.5	1.0	1	0	0	1	1	1	1	SLOG	cluster4	family
DNA_processg_A	PF02481.15	gi|289596471|ref|YP_003483167.1|	-	1.9e-06	27.3	0.3	0.00011	21.5	0.2	2.0	1	1	1	2	2	2	2	DNA	recombination-mediator	protein	A
Lysine_decarbox	PF03641.14	gi|289596471|ref|YP_003483167.1|	-	9.4e-05	22.5	0.0	0.00018	21.6	0.0	1.5	1	0	0	1	1	1	1	Possible	lysine	decarboxylase
Nuc_deoxyrib_tr	PF05014.15	gi|289596471|ref|YP_003483167.1|	-	0.13	12.3	0.0	0.17	11.9	0.0	1.2	1	0	0	1	1	1	0	Nucleoside	2-deoxyribosyltransferase
tRNA_anti-codon	PF01336.25	gi|289596472|ref|YP_003483168.1|	-	0.0003	20.7	0.0	0.00038	20.4	0.0	1.3	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
Spt5_N	PF11942.8	gi|289596472|ref|YP_003483168.1|	-	0.6	11.1	5.9	0.53	11.3	4.5	1.7	1	1	1	2	2	2	0	Spt5	transcription	elongation	factor,	acidic	N-terminal
ATPase	PF06745.13	gi|289596473|ref|YP_003483169.1|	-	2.8e-24	85.8	0.0	1.5e-23	83.4	0.0	1.9	1	1	0	1	1	1	1	KaiC
AAA_25	PF13481.6	gi|289596473|ref|YP_003483169.1|	-	4.5e-07	29.7	0.0	7.7e-07	28.9	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
DnaB_C	PF03796.15	gi|289596473|ref|YP_003483169.1|	-	7.7e-06	25.4	0.0	1.3e-05	24.7	0.0	1.5	1	1	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
AAA_24	PF13479.6	gi|289596473|ref|YP_003483169.1|	-	4.7e-05	23.2	0.0	0.00011	22.0	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_14	PF13173.6	gi|289596473|ref|YP_003483169.1|	-	0.00024	21.1	0.0	0.00063	19.8	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
ATPase_2	PF01637.18	gi|289596473|ref|YP_003483169.1|	-	0.00026	21.0	0.0	0.0004	20.4	0.0	1.3	1	0	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
GvpD	PF07088.11	gi|289596473|ref|YP_003483169.1|	-	0.00053	18.7	0.0	0.0037	15.9	0.0	1.9	2	0	0	2	2	2	1	GvpD	gas	vesicle	protein
AAA	PF00004.29	gi|289596473|ref|YP_003483169.1|	-	0.0009	19.7	0.1	0.016	15.6	0.1	2.3	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_33	PF13671.6	gi|289596473|ref|YP_003483169.1|	-	0.011	15.9	0.0	0.017	15.2	0.0	1.4	1	1	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.17	gi|289596473|ref|YP_003483169.1|	-	0.011	15.4	0.0	0.025	14.3	0.0	1.6	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
PPV_E1_C	PF00519.17	gi|289596473|ref|YP_003483169.1|	-	0.015	14.1	0.0	0.023	13.5	0.0	1.2	1	0	0	1	1	1	0	Papillomavirus	helicase
PhoH	PF02562.16	gi|289596473|ref|YP_003483169.1|	-	0.026	14.0	0.0	0.059	12.8	0.0	1.5	2	0	0	2	2	2	0	PhoH-like	protein
AAA_22	PF13401.6	gi|289596473|ref|YP_003483169.1|	-	0.032	14.5	0.0	0.12	12.7	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
AAA_11	PF13086.6	gi|289596473|ref|YP_003483169.1|	-	0.033	14.0	0.0	0.046	13.5	0.0	1.4	1	1	0	1	1	1	0	AAA	domain
SUD-M	PF11633.8	gi|289596473|ref|YP_003483169.1|	-	0.034	13.8	0.0	0.048	13.4	0.0	1.4	1	0	0	1	1	1	0	Single-stranded	poly(A)	binding	domain
AAA_16	PF13191.6	gi|289596473|ref|YP_003483169.1|	-	0.04	14.3	0.0	0.06	13.7	0.0	1.5	1	1	0	1	1	1	0	AAA	ATPase	domain
DAP3	PF10236.9	gi|289596473|ref|YP_003483169.1|	-	0.058	12.6	0.0	0.11	11.6	0.0	1.4	1	0	0	1	1	1	0	Mitochondrial	ribosomal	death-associated	protein	3
AAA_5	PF07728.14	gi|289596473|ref|YP_003483169.1|	-	0.063	13.3	0.0	0.13	12.3	0.0	1.5	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
RNA_helicase	PF00910.22	gi|289596473|ref|YP_003483169.1|	-	0.087	13.2	0.1	0.27	11.6	0.1	2.0	2	1	0	2	2	2	0	RNA	helicase
Rad51	PF08423.11	gi|289596473|ref|YP_003483169.1|	-	0.097	11.9	0.0	2.2	7.4	0.0	2.1	2	0	0	2	2	2	0	Rad51
CobU	PF02283.16	gi|289596473|ref|YP_003483169.1|	-	0.12	12.0	0.0	16	5.1	0.0	2.2	2	0	0	2	2	2	0	Cobinamide	kinase	/	cobinamide	phosphate	guanyltransferase
AAA_31	PF13614.6	gi|289596473|ref|YP_003483169.1|	-	0.12	12.2	0.0	0.28	11.1	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
Zot	PF05707.12	gi|289596473|ref|YP_003483169.1|	-	0.12	12.0	0.0	0.26	10.9	0.0	1.5	1	0	0	1	1	1	0	Zonular	occludens	toxin	(Zot)
ATPase	PF06745.13	gi|289596474|ref|YP_003483170.1|	-	8.7e-40	136.5	0.1	1.8e-39	135.5	0.1	1.5	1	1	0	1	1	1	1	KaiC
AAA_25	PF13481.6	gi|289596474|ref|YP_003483170.1|	-	0.00043	19.9	0.1	0.0017	17.9	0.1	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_24	PF13479.6	gi|289596474|ref|YP_003483170.1|	-	0.002	17.9	0.1	0.0084	15.9	0.1	1.9	1	1	0	1	1	1	1	AAA	domain
Rad51	PF08423.11	gi|289596474|ref|YP_003483170.1|	-	0.0052	16.1	1.3	0.018	14.3	0.7	2.1	2	1	0	2	2	2	1	Rad51
PAXNEB	PF05625.11	gi|289596474|ref|YP_003483170.1|	-	0.0058	15.8	0.3	0.028	13.6	0.1	1.8	2	0	0	2	2	2	1	PAXNEB	protein
AAA_7	PF12775.7	gi|289596474|ref|YP_003483170.1|	-	0.011	15.3	0.0	0.016	14.7	0.0	1.2	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
GvpD	PF07088.11	gi|289596474|ref|YP_003483170.1|	-	0.012	14.2	0.1	0.052	12.2	0.0	1.9	2	1	0	2	2	2	0	GvpD	gas	vesicle	protein
IstB_IS21	PF01695.17	gi|289596474|ref|YP_003483170.1|	-	0.014	15.1	0.0	0.031	14.0	0.0	1.5	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA_22	PF13401.6	gi|289596474|ref|YP_003483170.1|	-	0.015	15.5	0.0	0.038	14.3	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
DnaB_C	PF03796.15	gi|289596474|ref|YP_003483170.1|	-	0.024	14.0	0.0	0.049	13.0	0.0	1.5	1	1	0	1	1	1	0	DnaB-like	helicase	C	terminal	domain
ResIII	PF04851.15	gi|289596474|ref|YP_003483170.1|	-	0.075	13.0	0.0	0.13	12.2	0.0	1.3	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
MEDS	PF14417.6	gi|289596474|ref|YP_003483170.1|	-	0.081	12.7	0.0	0.15	11.9	0.0	1.5	1	1	0	1	1	1	0	MEDS:	MEthanogen/methylotroph,	DcmR	Sensory	domain
TIP49	PF06068.13	gi|289596475|ref|YP_003483171.1|	-	0.011	14.9	1.9	0.013	14.7	1.9	1.0	1	0	0	1	1	1	0	TIP49	P-loop	domain
MS_channel	PF00924.18	gi|289596475|ref|YP_003483171.1|	-	0.023	14.3	0.3	0.11	12.1	0.0	1.8	1	1	1	2	2	2	0	Mechanosensitive	ion	channel
Lar_restr_allev	PF14354.6	gi|289596475|ref|YP_003483171.1|	-	0.038	14.4	0.2	0.07	13.5	0.2	1.4	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
DNA_ligase_ZBD	PF03119.16	gi|289596475|ref|YP_003483171.1|	-	0.044	13.8	1.3	0.087	12.9	1.3	1.6	1	1	0	1	1	1	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
DUF1272	PF06906.11	gi|289596475|ref|YP_003483171.1|	-	0.066	13.3	0.0	2.3	8.4	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1272)
DUF4881	PF16222.5	gi|289596475|ref|YP_003483171.1|	-	0.086	12.7	0.0	0.1	12.4	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4881)
OrsD	PF12013.8	gi|289596475|ref|YP_003483171.1|	-	0.086	13.3	0.4	0.42	11.1	0.4	1.9	1	1	0	1	1	1	0	Orsellinic	acid/F9775	biosynthesis	cluster	protein	D
Zn-ribbon_8	PF09723.10	gi|289596475|ref|YP_003483171.1|	-	0.093	12.9	0.5	0.72	10.0	0.0	2.2	2	0	0	2	2	2	0	Zinc	ribbon	domain
RNHCP	PF12647.7	gi|289596475|ref|YP_003483171.1|	-	0.13	12.3	0.3	0.23	11.4	0.2	1.4	1	1	0	1	1	1	0	RNHCP	domain
zf-TFIIB	PF13453.6	gi|289596475|ref|YP_003483171.1|	-	0.14	11.5	1.0	0.35	10.2	1.0	1.7	1	1	0	1	1	1	0	Transcription	factor	zinc-finger
DUF2310	PF10071.9	gi|289596475|ref|YP_003483171.1|	-	0.15	11.3	0.0	0.27	10.5	0.0	1.3	1	0	0	1	1	1	0	Zn-ribbon-containing,	possibly	nucleic-acid-binding	protein	(DUF2310)
ATC_hydrolase	PF14196.6	gi|289596475|ref|YP_003483171.1|	-	0.18	12.6	1.2	0.38	11.5	1.2	1.6	1	1	0	1	1	1	0	L-2-amino-thiazoline-4-carboxylic	acid	hydrolase
Ribosomal_S6e	PF01092.19	gi|289596477|ref|YP_003483173.1|	-	2.6e-44	150.2	1.0	2.9e-44	150.0	1.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S6e
eIF2_C	PF09173.11	gi|289596478|ref|YP_003483174.1|	-	1.9e-32	111.4	0.7	3.9e-32	110.3	0.7	1.6	1	0	0	1	1	1	1	Initiation	factor	eIF2	gamma,	C	terminal
GTP_EFTU	PF00009.27	gi|289596478|ref|YP_003483174.1|	-	8.5e-32	110.3	1.6	4e-31	108.1	1.6	1.9	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D2	PF03144.25	gi|289596478|ref|YP_003483174.1|	-	2.9e-06	27.6	0.2	9.3e-06	26.0	0.2	1.9	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.23	gi|289596478|ref|YP_003483174.1|	-	8.3e-05	22.6	0.0	0.00015	21.8	0.0	1.5	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
RsgA_GTPase	PF03193.16	gi|289596478|ref|YP_003483174.1|	-	0.00033	20.6	0.3	0.0043	17.0	0.1	2.2	2	0	0	2	2	2	1	RsgA	GTPase
MMR_HSR1_Xtn	PF16897.5	gi|289596478|ref|YP_003483174.1|	-	0.001	19.1	0.1	0.0019	18.2	0.1	1.4	1	0	0	1	1	1	1	C-terminal	region	of	MMR_HSR1	domain
PduV-EutP	PF10662.9	gi|289596478|ref|YP_003483174.1|	-	0.0016	18.2	1.0	0.79	9.5	0.0	2.4	2	0	0	2	2	2	2	Ethanolamine	utilisation	-	propanediol	utilisation
MeaB	PF03308.16	gi|289596478|ref|YP_003483174.1|	-	0.06	12.3	1.5	0.098	11.6	0.2	1.9	2	0	0	2	2	2	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
FeoB_N	PF02421.18	gi|289596478|ref|YP_003483174.1|	-	0.1	12.1	1.1	14	5.2	0.0	2.7	3	0	0	3	3	3	0	Ferrous	iron	transport	protein	B
NTP_transf_3	PF12804.7	gi|289596480|ref|YP_003483176.1|	-	1.3e-09	38.6	0.0	1.7e-09	38.2	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
CTP_transf_3	PF02348.19	gi|289596480|ref|YP_003483176.1|	-	0.024	14.6	0.0	0.082	12.8	0.1	1.7	2	0	0	2	2	2	0	Cytidylyltransferase
2Fe-2S_thioredx	PF01257.19	gi|289596481|ref|YP_003483177.1|	-	8.4e-50	168.4	0.0	9.3e-50	168.3	0.0	1.0	1	0	0	1	1	1	1	Thioredoxin-like	[2Fe-2S]	ferredoxin
Complex1_51K	PF01512.17	gi|289596482|ref|YP_003483178.1|	-	4e-50	169.6	0.0	6.1e-50	169.0	0.0	1.3	1	0	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase	51	Kd	subunit
NADH_4Fe-4S	PF10589.9	gi|289596482|ref|YP_003483178.1|	-	4.2e-27	94.0	0.2	6.9e-27	93.3	0.2	1.3	1	0	0	1	1	1	1	NADH-ubiquinone	oxidoreductase-F	iron-sulfur	binding	region
SLBB	PF10531.9	gi|289596482|ref|YP_003483178.1|	-	0.00022	21.0	1.0	0.00042	20.1	1.0	1.5	1	0	0	1	1	1	1	SLBB	domain
Molybdopterin	PF00384.22	gi|289596483|ref|YP_003483179.1|	-	5.3e-104	348.6	0.0	7.1e-104	348.2	0.0	1.2	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase
Molydop_binding	PF01568.21	gi|289596483|ref|YP_003483179.1|	-	4.8e-30	103.8	0.0	9.6e-30	102.9	0.0	1.5	1	0	0	1	1	1	1	Molydopterin	dinucleotide	binding	domain
Fer2_4	PF13510.6	gi|289596483|ref|YP_003483179.1|	-	1.9e-15	56.7	0.2	4.5e-15	55.5	0.2	1.7	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Molybdop_Fe4S4	PF04879.16	gi|289596483|ref|YP_003483179.1|	-	5.8e-13	48.6	0.9	5.8e-13	48.6	0.9	2.1	2	0	0	2	2	1	1	Molybdopterin	oxidoreductase	Fe4S4	domain
Fer2	PF00111.27	gi|289596483|ref|YP_003483179.1|	-	5.1e-10	39.2	0.8	5.1e-10	39.2	0.8	2.4	2	1	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_9	PF13187.6	gi|289596483|ref|YP_003483179.1|	-	4.2e-07	30.0	5.8	4.2e-07	30.0	5.8	2.6	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|289596483|ref|YP_003483179.1|	-	5.1e-06	27.0	19.7	5.3e-05	23.7	9.7	3.4	2	1	2	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|289596483|ref|YP_003483179.1|	-	0.00018	21.6	11.5	0.00018	21.6	11.5	2.9	2	1	1	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|289596483|ref|YP_003483179.1|	-	0.00027	21.3	6.4	0.00027	21.3	6.4	2.5	3	0	0	3	3	3	1	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|289596483|ref|YP_003483179.1|	-	0.0006	19.5	6.3	0.0006	19.5	6.3	3.9	4	0	0	4	4	4	2	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|289596483|ref|YP_003483179.1|	-	0.0012	18.8	26.3	0.0016	18.4	1.5	3.9	4	0	0	4	4	3	2	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|289596483|ref|YP_003483179.1|	-	0.009	16.9	11.7	0.24	12.4	6.1	3.2	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Na_Ca_ex_C	PF16494.5	gi|289596483|ref|YP_003483179.1|	-	0.08	13.4	0.1	0.98	9.9	0.0	2.5	2	0	0	2	2	2	0	C-terminal	extension	of	sodium/calcium	exchanger	domain
Fer4_22	PF17179.4	gi|289596483|ref|YP_003483179.1|	-	0.15	12.9	6.9	5.6	7.9	0.1	2.8	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|289596483|ref|YP_003483179.1|	-	0.34	11.1	16.4	0.021	15.0	8.7	2.8	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|289596483|ref|YP_003483179.1|	-	0.88	10.4	10.2	1	10.1	0.7	3.1	1	1	1	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_17	PF13534.6	gi|289596483|ref|YP_003483179.1|	-	0.95	10.1	12.5	1.6	9.3	1.7	2.8	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|289596483|ref|YP_003483179.1|	-	2.2	8.5	11.8	2.8	8.1	1.1	2.9	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|289596483|ref|YP_003483179.1|	-	6.2	7.1	26.8	0.08	13.1	2.5	3.8	4	0	0	4	4	3	0	4Fe-4S	binding	domain
Amidohydro_1	PF01979.20	gi|289596484|ref|YP_003483180.1|	-	1.8e-71	241.2	1.8	2.1e-71	241.0	1.8	1.0	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.11	gi|289596484|ref|YP_003483180.1|	-	1.4e-19	71.0	0.1	9.8e-13	48.4	0.0	2.2	1	1	0	2	2	2	2	Amidohydrolase	family
Lactamase_B_2	PF12706.7	gi|289596485|ref|YP_003483181.1|	-	7.3e-24	84.4	0.1	8.8e-24	84.1	0.1	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.6	gi|289596485|ref|YP_003483181.1|	-	4.4e-15	56.0	0.6	7.4e-15	55.2	0.6	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|289596485|ref|YP_003483181.1|	-	0.00035	20.6	2.0	0.0005	20.1	0.4	1.9	2	0	0	2	2	2	1	Metallo-beta-lactamase	superfamily
DUF3783	PF12646.7	gi|289596486|ref|YP_003483182.1|	-	1.4e-16	60.2	1.5	5.8e-16	58.2	0.2	2.2	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF3783)
FliG_N	PF14842.6	gi|289596486|ref|YP_003483182.1|	-	0.017	15.7	0.4	0.034	14.7	0.3	1.6	1	1	1	2	2	2	0	FliG	N-terminal	domain
Atg8	PF02991.16	gi|289596486|ref|YP_003483182.1|	-	0.039	14.2	0.7	0.72	10.1	0.7	2.0	1	1	0	1	1	1	0	Autophagy	protein	Atg8	ubiquitin	like
Cas3_C	PF18395.1	gi|289596486|ref|YP_003483182.1|	-	0.15	12.6	0.0	0.32	11.5	0.0	1.6	1	1	1	2	2	2	0	Cas3	C-terminal	domain
AFOR_C	PF01314.18	gi|289596487|ref|YP_003483183.1|	-	2.7e-94	316.3	0.0	4.9e-94	315.5	0.0	1.4	1	1	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	domains	2	&	3
AFOR_N	PF02730.15	gi|289596487|ref|YP_003483183.1|	-	1.8e-75	253.2	0.1	4e-75	252.0	0.2	1.6	2	0	0	2	2	2	1	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
PEMT	PF04191.13	gi|289596488|ref|YP_003483184.1|	-	1e-11	45.2	0.7	1.6e-11	44.5	0.7	1.3	1	0	0	1	1	1	1	Phospholipid	methyltransferase
DUF1295	PF06966.12	gi|289596488|ref|YP_003483184.1|	-	1.9e-05	24.3	0.4	2.5e-05	23.9	0.4	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1295)
ICMT	PF04140.14	gi|289596488|ref|YP_003483184.1|	-	4.1e-05	23.9	0.8	9.4e-05	22.8	0.1	1.8	1	1	1	2	2	2	1	Isoprenylcysteine	carboxyl	methyltransferase	(ICMT)	family
DNA_ligase_A_M	PF01068.21	gi|289596489|ref|YP_003483185.1|	-	1.8e-59	200.8	0.0	3e-59	200.1	0.0	1.4	1	0	0	1	1	1	1	ATP	dependent	DNA	ligase	domain
DNA_ligase_A_N	PF04675.14	gi|289596489|ref|YP_003483185.1|	-	4.7e-42	144.2	1.2	8.6e-42	143.4	1.2	1.5	1	0	0	1	1	1	1	DNA	ligase	N	terminus
DNA_ligase_A_C	PF04679.15	gi|289596489|ref|YP_003483185.1|	-	1e-23	83.8	0.1	5e-23	81.6	0.0	2.1	2	0	0	2	2	2	1	ATP	dependent	DNA	ligase	C	terminal	region
DNA_ligase_OB_2	PF14743.6	gi|289596489|ref|YP_003483185.1|	-	0.0025	17.8	0.4	0.014	15.4	0.0	2.5	3	0	0	3	3	3	1	DNA	ligase	OB-like	domain
mRNA_cap_enzyme	PF01331.19	gi|289596489|ref|YP_003483185.1|	-	0.093	12.5	0.0	0.62	9.9	0.0	2.1	2	0	0	2	2	2	0	mRNA	capping	enzyme,	catalytic	domain
ABC2_membrane_2	PF12679.7	gi|289596490|ref|YP_003483186.1|	-	1.4e-13	50.8	25.5	1.2e-12	47.8	25.5	2.2	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.7	gi|289596490|ref|YP_003483186.1|	-	3.6e-08	33.6	17.3	3.6e-08	33.6	17.3	1.9	2	0	0	2	2	2	1	ABC-2	family	transporter	protein
ABC2_membrane	PF01061.24	gi|289596490|ref|YP_003483186.1|	-	9.6e-07	28.4	26.4	9.6e-07	28.4	26.4	1.9	2	0	0	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.7	gi|289596490|ref|YP_003483186.1|	-	2e-06	27.2	38.5	4.5e-06	26.0	38.5	1.6	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_5	PF13346.6	gi|289596490|ref|YP_003483186.1|	-	0.0017	18.0	42.0	0.12	11.9	31.3	3.0	1	1	1	2	2	2	2	ABC-2	family	transporter	protein
ABC_tran	PF00005.27	gi|289596491|ref|YP_003483187.1|	-	3.2e-28	99.0	0.0	6.8e-28	97.9	0.0	1.5	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.6	gi|289596491|ref|YP_003483187.1|	-	1.7e-11	44.5	0.0	1.6e-06	28.2	0.0	2.2	2	0	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_30	PF13604.6	gi|289596491|ref|YP_003483187.1|	-	0.0069	16.1	0.0	0.012	15.3	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_27	PF13514.6	gi|289596491|ref|YP_003483187.1|	-	0.013	15.1	0.0	0.051	13.2	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
SMC_N	PF02463.19	gi|289596491|ref|YP_003483187.1|	-	0.062	12.7	0.3	1.2	8.6	0.0	2.2	1	1	1	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
Mg_chelatase	PF01078.21	gi|289596491|ref|YP_003483187.1|	-	0.063	12.7	0.0	0.13	11.7	0.0	1.5	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
HAD_SAK_1	PF10307.9	gi|289596491|ref|YP_003483187.1|	-	0.069	13.0	0.1	0.4	10.5	0.0	1.9	2	0	0	2	2	2	0	HAD	domain	family	1	in	Swiss	Army	Knife	RNA	repair	proteins
AAA_29	PF13555.6	gi|289596491|ref|YP_003483187.1|	-	0.087	12.6	0.1	0.29	10.9	0.0	1.9	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.6	gi|289596491|ref|YP_003483187.1|	-	0.13	12.7	0.9	0.47	10.9	0.2	2.1	2	0	0	2	2	2	0	AAA	domain
DUF3970	PF13113.6	gi|289596491|ref|YP_003483187.1|	-	0.17	12.1	0.8	6	7.2	0.0	3.1	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF3970)
Gram_pos_anchor	PF00746.21	gi|289596492|ref|YP_003483188.1|	-	0.21	11.5	1.7	2	8.4	0.2	2.6	2	0	0	2	2	2	0	LPXTG	cell	wall	anchor	motif
SPT_ssu-like	PF11779.8	gi|289596492|ref|YP_003483188.1|	-	1.3	8.7	3.4	16	5.2	0.3	2.4	2	0	0	2	2	2	0	Small	subunit	of	serine	palmitoyltransferase-like
DUF1648	PF07853.11	gi|289596493|ref|YP_003483189.1|	-	3.1e-13	49.2	0.2	3.1e-13	49.2	0.2	4.5	5	2	2	7	7	7	1	Protein	of	unknown	function	(DUF1648)
SdpI	PF13630.6	gi|289596493|ref|YP_003483189.1|	-	2.8e-11	43.3	6.4	2.8e-11	43.3	6.4	4.4	3	1	1	4	4	4	2	SdpI/YhfL	protein	family
PadR	PF03551.14	gi|289596494|ref|YP_003483190.1|	-	6.5e-19	67.7	0.3	6.5e-19	67.7	0.3	1.6	2	0	0	2	2	2	1	Transcriptional	regulator	PadR-like	family
DUF384	PF04064.13	gi|289596494|ref|YP_003483190.1|	-	0.0029	17.4	0.0	0.0053	16.6	0.0	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF384)
Fe_dep_repr_C	PF02742.15	gi|289596494|ref|YP_003483190.1|	-	0.0061	16.6	0.2	0.071	13.2	0.1	2.2	2	0	0	2	2	2	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
DUF3116	PF11313.8	gi|289596494|ref|YP_003483190.1|	-	0.1	12.5	0.1	1	9.3	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3116)
Urb2	PF10441.9	gi|289596494|ref|YP_003483190.1|	-	0.14	12.0	0.3	13	5.6	0.0	2.2	2	0	0	2	2	2	0	Urb2/Npa2	family
DNA_gyraseB	PF00204.25	gi|289596495|ref|YP_003483191.1|	-	1.3e-61	207.1	0.2	2.1e-61	206.4	0.2	1.3	1	0	0	1	1	1	1	DNA	gyrase	B
DNA_gyraseB_C	PF00986.21	gi|289596495|ref|YP_003483191.1|	-	1.8e-30	104.9	0.1	4e-30	103.8	0.1	1.5	1	0	0	1	1	1	1	DNA	gyrase	B	subunit,	carboxyl	terminus
HATPase_c	PF02518.26	gi|289596495|ref|YP_003483191.1|	-	3e-21	76.0	0.0	2e-20	73.4	0.0	2.3	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
Toprim	PF01751.22	gi|289596495|ref|YP_003483191.1|	-	3e-20	72.4	0.1	1.1e-19	70.6	0.0	2.1	2	0	0	2	2	2	1	Toprim	domain
HATPase_c_3	PF13589.6	gi|289596495|ref|YP_003483191.1|	-	0.0011	18.8	0.0	0.0022	17.8	0.0	1.5	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
DNA_topoisoIV	PF00521.20	gi|289596496|ref|YP_003483192.1|	-	1.5e-162	541.4	1.7	1.8e-162	541.1	1.7	1.1	1	0	0	1	1	1	1	DNA	gyrase/topoisomerase	IV,	subunit	A
DNA_gyraseA_C	PF03989.13	gi|289596496|ref|YP_003483192.1|	-	3.7e-71	234.4	19.6	5.7e-15	54.5	0.2	6.5	6	0	0	6	6	6	6	DNA	gyrase	C-terminal	domain,	beta-propeller
TPD52	PF04201.15	gi|289596496|ref|YP_003483192.1|	-	0.033	13.8	1.8	0.071	12.7	1.8	1.5	1	0	0	1	1	1	0	Tumour	protein	D52	family
RuvA_C	PF07499.13	gi|289596496|ref|YP_003483192.1|	-	0.21	12.1	0.6	0.52	10.8	0.1	2.1	2	0	0	2	2	2	0	RuvA,	C-terminal	domain
DUF4600	PF15372.6	gi|289596496|ref|YP_003483192.1|	-	2.9	8.3	6.4	13	6.3	6.3	2.1	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4600)
Radical_SAM	PF04055.21	gi|289596497|ref|YP_003483193.1|	-	4.8e-14	53.1	0.0	1.2e-13	51.8	0.0	1.7	2	0	0	2	2	2	1	Radical	SAM	superfamily
YicC_N	PF03755.13	gi|289596497|ref|YP_003483193.1|	-	0.083	13.3	0.1	0.26	11.7	0.1	1.9	2	0	0	2	2	2	0	YicC-like	family,	N-terminal	region
DUF1798	PF08807.10	gi|289596497|ref|YP_003483193.1|	-	0.09	12.9	0.3	0.24	11.6	0.3	1.8	1	0	0	1	1	1	0	Bacterial	domain	of	unknown	function	(DUF1798)
Exo_endo_phos	PF03372.23	gi|289596498|ref|YP_003483194.1|	-	1.5e-20	73.7	0.0	1.9e-20	73.4	0.0	1.1	1	0	0	1	1	1	1	Endonuclease/Exonuclease/phosphatase	family
Exo_endo_phos_2	PF14529.6	gi|289596498|ref|YP_003483194.1|	-	1e-07	31.8	0.0	7.2e-07	29.1	0.0	2.1	1	1	0	1	1	1	1	Endonuclease-reverse	transcriptase
DUF4065	PF13274.6	gi|289596499|ref|YP_003483195.1|	-	2.9e-05	24.9	0.2	3.8e-05	24.6	0.2	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4065)
CbiA	PF01656.23	gi|289596500|ref|YP_003483196.1|	-	3.8e-17	62.6	0.0	5.8e-17	61.9	0.0	1.2	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ParA	PF10609.9	gi|289596500|ref|YP_003483196.1|	-	6.5e-16	58.5	0.1	6.1e-08	32.4	0.1	2.9	2	1	0	2	2	2	2	NUBPL	iron-transfer	P-loop	NTPase
Fer4_21	PF14697.6	gi|289596500|ref|YP_003483196.1|	-	5.7e-08	32.8	15.4	8.9e-08	32.1	14.0	1.9	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|289596500|ref|YP_003483196.1|	-	7.1e-08	31.9	16.8	0.00045	19.9	4.0	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_NifH	PF00142.18	gi|289596500|ref|YP_003483196.1|	-	5e-07	29.4	0.1	0.0014	18.2	0.0	2.5	2	1	0	2	2	2	2	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
Fer4_7	PF12838.7	gi|289596500|ref|YP_003483196.1|	-	1.5e-06	28.7	10.8	3.2e-06	27.6	10.8	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
CBP_BcsQ	PF06564.12	gi|289596500|ref|YP_003483196.1|	-	1.2e-05	25.0	0.0	0.0027	17.2	0.0	2.4	2	1	0	2	2	2	1	Cellulose	biosynthesis	protein	BcsQ
Fer4_9	PF13187.6	gi|289596500|ref|YP_003483196.1|	-	1.7e-05	24.9	11.0	3.1e-05	24.1	11.0	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
AAA_31	PF13614.6	gi|289596500|ref|YP_003483196.1|	-	2.1e-05	24.5	0.1	0.00027	20.9	0.1	2.1	1	1	0	1	1	1	1	AAA	domain
Fer4_10	PF13237.6	gi|289596500|ref|YP_003483196.1|	-	0.00014	21.9	13.0	0.00044	20.3	13.3	1.7	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|289596500|ref|YP_003483196.1|	-	0.00026	20.9	14.7	0.0057	16.7	3.3	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|289596500|ref|YP_003483196.1|	-	0.00041	20.3	13.7	0.038	14.1	2.0	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|289596500|ref|YP_003483196.1|	-	0.001	19.4	13.3	0.027	15.0	1.6	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|289596500|ref|YP_003483196.1|	-	0.0039	17.6	13.3	0.9	10.0	13.3	2.3	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|289596500|ref|YP_003483196.1|	-	0.01	16.4	10.7	0.63	10.6	2.0	2.3	1	1	3	4	4	4	0	4Fe-4S	dicluster	domain
ArsA_ATPase	PF02374.15	gi|289596500|ref|YP_003483196.1|	-	0.014	14.6	0.0	0.022	14.0	0.0	1.4	1	0	0	1	1	1	0	Anion-transporting	ATPase
MipZ	PF09140.11	gi|289596500|ref|YP_003483196.1|	-	0.028	13.7	0.0	0.039	13.2	0.0	1.2	1	0	0	1	1	1	0	ATPase	MipZ
AAA_26	PF13500.6	gi|289596500|ref|YP_003483196.1|	-	0.056	13.3	0.7	1.5	8.6	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
RsgA_GTPase	PF03193.16	gi|289596500|ref|YP_003483196.1|	-	0.057	13.3	0.0	0.5	10.2	0.0	2.2	2	0	0	2	2	2	0	RsgA	GTPase
Fer4_16	PF13484.6	gi|289596500|ref|YP_003483196.1|	-	0.067	14.1	14.5	0.15	13.0	3.1	2.6	2	1	2	4	4	3	0	4Fe-4S	double	cluster	binding	domain
ATP_bind_1	PF03029.17	gi|289596500|ref|YP_003483196.1|	-	0.16	11.7	0.0	0.24	11.2	0.0	1.2	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
Helicase_RecD	PF05127.14	gi|289596500|ref|YP_003483196.1|	-	0.17	11.7	0.1	1.8	8.4	0.0	2.1	2	0	0	2	2	2	0	Helicase
Fer4_22	PF17179.4	gi|289596500|ref|YP_003483196.1|	-	0.77	10.6	13.1	0.44	11.4	2.2	2.3	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|289596500|ref|YP_003483196.1|	-	2.1	8.9	11.9	3	8.4	2.5	2.5	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_3	PF12798.7	gi|289596500|ref|YP_003483196.1|	-	3.6	8.7	16.4	0.75	10.9	5.6	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
CbiA	PF01656.23	gi|289596501|ref|YP_003483197.1|	-	5.1e-20	71.8	0.0	6.4e-20	71.5	0.0	1.1	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ParA	PF10609.9	gi|289596501|ref|YP_003483197.1|	-	1.6e-17	63.8	0.5	7e-09	35.5	0.0	3.0	2	1	0	2	2	2	2	NUBPL	iron-transfer	P-loop	NTPase
Fer4_6	PF12837.7	gi|289596501|ref|YP_003483197.1|	-	7.9e-11	41.5	9.9	1.2e-06	28.3	1.0	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
AAA_31	PF13614.6	gi|289596501|ref|YP_003483197.1|	-	1.3e-09	38.2	1.6	6.3e-05	23.0	0.1	2.8	2	1	1	3	3	3	2	AAA	domain
Fer4_10	PF13237.6	gi|289596501|ref|YP_003483197.1|	-	6e-08	32.7	3.8	0.0044	17.1	1.0	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|289596501|ref|YP_003483197.1|	-	2e-07	30.5	14.7	3.5e-05	23.4	1.5	2.6	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|289596501|ref|YP_003483197.1|	-	2.7e-07	30.3	10.3	0.0024	17.9	1.4	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|289596501|ref|YP_003483197.1|	-	4.2e-07	30.0	4.1	8.2e-07	29.1	4.1	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|289596501|ref|YP_003483197.1|	-	1.5e-06	28.7	23.0	5.4e-05	23.7	12.5	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
CBP_BcsQ	PF06564.12	gi|289596501|ref|YP_003483197.1|	-	1.7e-06	27.7	0.0	0.041	13.4	0.0	2.1	2	0	0	2	2	2	2	Cellulose	biosynthesis	protein	BcsQ
Fer4_NifH	PF00142.18	gi|289596501|ref|YP_003483197.1|	-	1.9e-06	27.5	0.4	0.008	15.6	0.0	2.3	2	0	0	2	2	2	2	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
Fer4_16	PF13484.6	gi|289596501|ref|YP_003483197.1|	-	1.1e-05	26.3	5.5	0.056	14.4	1.4	2.7	3	0	0	3	3	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_9	PF13187.6	gi|289596501|ref|YP_003483197.1|	-	2.5e-05	24.3	11.1	0.0022	18.1	13.3	2.3	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
ArsA_ATPase	PF02374.15	gi|289596501|ref|YP_003483197.1|	-	0.00016	21.0	2.0	0.00074	18.8	1.5	2.2	3	0	0	3	3	3	1	Anion-transporting	ATPase
CLP1_P	PF16575.5	gi|289596501|ref|YP_003483197.1|	-	0.0017	18.2	0.1	0.0036	17.1	0.1	1.5	1	0	0	1	1	1	1	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
MipZ	PF09140.11	gi|289596501|ref|YP_003483197.1|	-	0.0027	17.0	0.1	0.016	14.5	0.0	1.9	2	0	0	2	2	2	1	ATPase	MipZ
Fer4_15	PF13459.6	gi|289596501|ref|YP_003483197.1|	-	0.008	16.9	4.0	0.35	11.6	0.4	3.1	3	0	0	3	3	2	1	4Fe-4S	single	cluster	domain
AAA_25	PF13481.6	gi|289596501|ref|YP_003483197.1|	-	0.011	15.4	0.2	0.022	14.3	0.2	1.5	1	0	0	1	1	1	0	AAA	domain
Fer4_3	PF12798.7	gi|289596501|ref|YP_003483197.1|	-	0.017	16.1	17.2	0.53	11.3	4.5	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
AAA_33	PF13671.6	gi|289596501|ref|YP_003483197.1|	-	0.018	15.2	0.0	0.032	14.4	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Fer4_4	PF12800.7	gi|289596501|ref|YP_003483197.1|	-	0.027	14.9	11.3	0.16	12.6	0.9	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|289596501|ref|YP_003483197.1|	-	0.032	14.7	15.0	0.29	11.6	3.1	2.4	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|289596501|ref|YP_003483197.1|	-	0.044	14.6	5.7	0.61	11.0	0.3	2.3	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
VirC1	PF07015.11	gi|289596501|ref|YP_003483197.1|	-	0.046	13.0	0.6	1.9	7.8	0.1	2.2	2	0	0	2	2	2	0	VirC1	protein
AAA_22	PF13401.6	gi|289596501|ref|YP_003483197.1|	-	0.079	13.2	0.0	0.18	12.0	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.12	gi|289596501|ref|YP_003483197.1|	-	0.09	12.0	0.3	0.16	11.3	0.3	1.3	1	0	0	1	1	1	0	Zeta	toxin
Fer4_17	PF13534.6	gi|289596501|ref|YP_003483197.1|	-	0.092	13.3	15.8	1.1	9.8	4.4	2.4	1	1	0	2	2	2	0	4Fe-4S	dicluster	domain
AAA_18	PF13238.6	gi|289596501|ref|YP_003483197.1|	-	0.16	12.5	0.1	0.6	10.7	0.1	1.9	2	1	0	2	2	2	0	AAA	domain
RsgA_GTPase	PF03193.16	gi|289596501|ref|YP_003483197.1|	-	0.26	11.2	1.4	5.8	6.8	0.0	2.2	2	0	0	2	2	2	0	RsgA	GTPase
Fer4_13	PF13370.6	gi|289596501|ref|YP_003483197.1|	-	1.2	9.7	11.1	4.6	7.9	0.8	2.6	3	0	0	3	3	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Nitro_FeMo-Co	PF02579.17	gi|289596502|ref|YP_003483198.1|	-	1.2e-19	70.4	0.0	1.5e-19	70.1	0.0	1.1	1	0	0	1	1	1	1	Dinitrogenase	iron-molybdenum	cofactor
CD24	PF14984.6	gi|289596502|ref|YP_003483198.1|	-	0.24	11.6	0.4	0.48	10.7	0.2	1.6	2	0	0	2	2	2	0	CD24	protein
Synaptobrevin	PF00957.21	gi|289596503|ref|YP_003483199.1|	-	0.34	10.7	2.1	1.7	8.5	0.0	2.4	2	0	0	2	2	2	0	Synaptobrevin
ABC_tran	PF00005.27	gi|289596505|ref|YP_003483201.1|	-	2.8e-28	99.1	0.0	3.9e-28	98.7	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|289596505|ref|YP_003483201.1|	-	6.2e-12	45.9	0.6	4.5e-06	26.7	0.0	2.2	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_23	PF13476.6	gi|289596505|ref|YP_003483201.1|	-	0.00012	22.7	0.2	0.00016	22.2	0.2	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.6	gi|289596505|ref|YP_003483201.1|	-	0.00019	21.3	2.0	0.18	11.5	0.1	2.6	2	1	1	3	3	3	2	AAA	ATPase	domain
Rad17	PF03215.15	gi|289596505|ref|YP_003483201.1|	-	0.00033	20.6	0.1	0.00066	19.6	0.0	1.6	2	1	0	2	2	2	1	Rad17	P-loop	domain
RsgA_GTPase	PF03193.16	gi|289596505|ref|YP_003483201.1|	-	0.0019	18.1	0.1	0.0037	17.2	0.1	1.4	1	0	0	1	1	1	1	RsgA	GTPase
AAA_29	PF13555.6	gi|289596505|ref|YP_003483201.1|	-	0.0039	16.9	0.1	0.0068	16.1	0.1	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
MeaB	PF03308.16	gi|289596505|ref|YP_003483201.1|	-	0.0056	15.7	0.0	0.0088	15.1	0.0	1.2	1	0	0	1	1	1	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
SMC_N	PF02463.19	gi|289596505|ref|YP_003483201.1|	-	0.0082	15.6	0.2	2.9	7.3	0.0	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
KAP_NTPase	PF07693.14	gi|289596505|ref|YP_003483201.1|	-	0.012	14.8	0.4	2.5	7.3	0.0	2.2	2	0	0	2	2	2	0	KAP	family	P-loop	domain
AAA_30	PF13604.6	gi|289596505|ref|YP_003483201.1|	-	0.016	14.9	0.0	0.029	14.1	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
ATPase_2	PF01637.18	gi|289596505|ref|YP_003483201.1|	-	0.017	15.0	4.1	3.2	7.6	0.0	2.3	2	0	0	2	2	2	0	ATPase	domain	predominantly	from	Archaea
MobB	PF03205.14	gi|289596505|ref|YP_003483201.1|	-	0.021	14.7	1.4	0.7	9.8	0.0	2.4	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
MMR_HSR1	PF01926.23	gi|289596505|ref|YP_003483201.1|	-	0.03	14.4	0.2	0.075	13.1	0.2	1.9	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
Roc	PF08477.13	gi|289596505|ref|YP_003483201.1|	-	0.032	14.5	0.0	0.084	13.1	0.0	1.7	1	0	0	1	1	1	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
cobW	PF02492.19	gi|289596505|ref|YP_003483201.1|	-	0.059	13.0	0.3	0.11	12.1	0.3	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
TsaE	PF02367.17	gi|289596505|ref|YP_003483201.1|	-	0.074	13.0	0.1	0.18	11.8	0.1	1.6	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_22	PF13401.6	gi|289596505|ref|YP_003483201.1|	-	0.076	13.3	0.6	0.36	11.1	0.6	2.2	1	1	0	1	1	1	0	AAA	domain
AAA_14	PF13173.6	gi|289596505|ref|YP_003483201.1|	-	0.19	11.8	0.9	5.8	7.0	0.1	2.5	1	1	1	3	3	3	0	AAA	domain
AAA	PF00004.29	gi|289596505|ref|YP_003483201.1|	-	0.2	12.1	3.5	0.2	12.1	0.9	2.3	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_33	PF13671.6	gi|289596505|ref|YP_003483201.1|	-	0.2	11.8	0.2	0.54	10.4	0.2	1.4	1	1	0	1	1	1	0	AAA	domain
DHODB_Fe-S_bind	PF10418.9	gi|289596506|ref|YP_003483202.1|	-	3.4e-10	39.6	0.9	7.6e-10	38.4	0.9	1.6	1	0	0	1	1	1	1	Iron-sulfur	cluster	binding	domain	of	dihydroorotate	dehydrogenase	B
NAD_binding_1	PF00175.21	gi|289596506|ref|YP_003483202.1|	-	0.022	15.4	0.3	0.086	13.5	0.3	2.0	1	1	0	1	1	1	0	Oxidoreductase	NAD-binding	domain
FAD_binding_6	PF00970.24	gi|289596506|ref|YP_003483202.1|	-	0.099	13.0	0.0	0.2	12.0	0.0	1.6	1	1	0	1	1	1	0	Oxidoreductase	FAD-binding	domain
DHO_dh	PF01180.21	gi|289596507|ref|YP_003483203.1|	-	1.1e-70	238.2	1.7	1.2e-70	238.1	1.7	1.0	1	0	0	1	1	1	1	Dihydroorotate	dehydrogenase
Dus	PF01207.17	gi|289596507|ref|YP_003483203.1|	-	6.3e-12	45.2	0.4	1.3e-09	37.6	0.0	2.1	2	0	0	2	2	2	2	Dihydrouridine	synthase	(Dus)
NMO	PF03060.15	gi|289596507|ref|YP_003483203.1|	-	5.5e-05	22.7	0.9	0.0047	16.4	0.3	2.3	2	0	0	2	2	2	1	Nitronate	monooxygenase
His_biosynth	PF00977.21	gi|289596507|ref|YP_003483203.1|	-	8.7e-05	22.1	1.0	0.0033	16.9	0.3	2.8	2	2	1	3	3	3	1	Histidine	biosynthesis	protein
IMPDH	PF00478.25	gi|289596507|ref|YP_003483203.1|	-	0.0035	16.4	0.4	0.013	14.6	0.1	2.0	3	0	0	3	3	3	1	IMP	dehydrogenase	/	GMP	reductase	domain
FMN_dh	PF01070.18	gi|289596507|ref|YP_003483203.1|	-	0.0063	15.6	0.2	0.017	14.1	0.1	1.7	2	0	0	2	2	2	1	FMN-dependent	dehydrogenase
Radical_SAM	PF04055.21	gi|289596507|ref|YP_003483203.1|	-	0.038	14.4	0.1	0.38	11.1	0.0	2.4	2	1	0	2	2	2	0	Radical	SAM	superfamily
PcrB	PF01884.17	gi|289596507|ref|YP_003483203.1|	-	0.066	12.7	3.3	0.26	10.7	1.0	2.4	1	1	1	2	2	2	0	PcrB	family
DUF561	PF04481.12	gi|289596507|ref|YP_003483203.1|	-	0.072	12.3	3.5	0.64	9.1	2.1	2.9	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF561)
ArgoL2	PF16488.5	gi|289596507|ref|YP_003483203.1|	-	0.075	13.4	0.0	2.8	8.4	0.0	2.6	2	0	0	2	2	2	0	Argonaute	linker	2	domain
G3P_antiterm	PF04309.12	gi|289596507|ref|YP_003483203.1|	-	0.15	11.4	1.5	2.9	7.3	0.1	3.1	4	1	0	4	4	4	0	Glycerol-3-phosphate	responsive	antiterminator
CinA	PF02464.17	gi|289596508|ref|YP_003483204.1|	-	2.6e-60	202.5	0.3	2.9e-60	202.3	0.3	1.0	1	0	0	1	1	1	1	Competence-damaged	protein
UPF0254	PF06787.11	gi|289596508|ref|YP_003483204.1|	-	0.095	12.5	1.0	1.2	8.9	0.3	2.1	1	1	0	2	2	2	0	Uncharacterised	protein	family	(UPF0254)
CTP_transf_like	PF01467.26	gi|289596509|ref|YP_003483205.1|	-	1.2e-12	48.2	0.0	1.8e-12	47.7	0.0	1.3	1	0	0	1	1	1	1	Cytidylyltransferase-like
HIGH_NTase1	PF05636.11	gi|289596509|ref|YP_003483205.1|	-	0.027	13.7	0.2	0.082	12.1	0.2	1.7	2	0	0	2	2	2	0	HIGH	Nucleotidyl	Transferase
VIT1	PF01988.19	gi|289596510|ref|YP_003483206.1|	-	2.3e-44	151.8	3.6	2.3e-44	151.8	3.6	1.6	2	0	0	2	2	2	1	VIT	family
Rubrerythrin	PF02915.17	gi|289596510|ref|YP_003483206.1|	-	1.9e-05	25.1	6.3	4.7e-05	23.8	6.3	1.6	1	0	0	1	1	1	1	Rubrerythrin
DUF1189	PF06691.11	gi|289596510|ref|YP_003483206.1|	-	0.016	14.8	0.8	0.026	14.1	0.8	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1189)
Pox_P35	PF03213.14	gi|289596510|ref|YP_003483206.1|	-	0.071	12.3	0.0	0.1	11.8	0.0	1.2	1	0	0	1	1	1	0	Poxvirus	P35	protein
Pribosyltran	PF00156.27	gi|289596511|ref|YP_003483207.1|	-	3.7e-24	85.1	0.0	5.1e-24	84.6	0.0	1.2	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.6	gi|289596511|ref|YP_003483207.1|	-	0.016	14.7	0.0	0.021	14.3	0.0	1.2	1	0	0	1	1	1	0	Uracil	phosphoribosyltransferase
THF_DHG_CYH_C	PF02882.19	gi|289596511|ref|YP_003483207.1|	-	0.1	11.9	0.0	0.13	11.6	0.0	1.2	1	0	0	1	1	1	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
Pribosyltran	PF00156.27	gi|289596512|ref|YP_003483208.1|	-	3.5e-17	62.4	3.2	4.8e-17	61.9	3.2	1.1	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.6	gi|289596512|ref|YP_003483208.1|	-	1e-05	25.1	0.3	1.6e-05	24.4	0.3	1.3	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
PRTase_2	PF15609.6	gi|289596512|ref|YP_003483208.1|	-	0.00029	20.4	0.2	0.00044	19.8	0.2	1.2	1	0	0	1	1	1	1	Phosphoribosyl	transferase
CAP18_C	PF12153.8	gi|289596512|ref|YP_003483208.1|	-	0.67	9.9	6.1	2	8.4	0.2	2.4	2	0	0	2	2	2	0	LPS	binding	domain	of	CAP18	(C	terminal)
Glycos_trans_3N	PF02885.17	gi|289596513|ref|YP_003483209.1|	-	0.0023	17.7	0.4	0.005	16.6	0.4	1.6	1	0	0	1	1	1	1	Glycosyl	transferase	family,	helical	bundle	domain
DUF3387	PF11867.8	gi|289596513|ref|YP_003483209.1|	-	0.0024	17.3	7.3	0.0035	16.8	7.3	1.4	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF3387)
DUF3683	PF12447.8	gi|289596513|ref|YP_003483209.1|	-	0.0028	17.8	0.4	0.028	14.6	0.4	2.0	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF3683)
RNase_J_C	PF17770.1	gi|289596513|ref|YP_003483209.1|	-	0.013	16.5	2.6	0.057	14.5	1.3	2.1	2	0	0	2	2	2	0	Ribonuclease	J	C-terminal	domain
RGS	PF00615.19	gi|289596513|ref|YP_003483209.1|	-	0.032	14.5	0.8	0.04	14.2	0.8	1.2	1	0	0	1	1	1	0	Regulator	of	G	protein	signaling	domain
Utp8	PF10395.9	gi|289596513|ref|YP_003483209.1|	-	0.036	12.6	1.5	0.04	12.4	1.5	1.0	1	0	0	1	1	1	0	Utp8	family
T4_Rnl2_C	PF18043.1	gi|289596513|ref|YP_003483209.1|	-	0.052	13.7	4.1	0.065	13.4	1.8	2.0	2	0	0	2	2	2	0	T4	RNA	ligase	2	C-terminal
MetOD1	PF18546.1	gi|289596513|ref|YP_003483209.1|	-	0.32	10.9	8.3	1.4	8.9	0.2	2.1	1	1	0	2	2	2	0	Metanogen	output	domain	1
UPF0154	PF03672.13	gi|289596513|ref|YP_003483209.1|	-	2.4	8.3	13.2	0.38	10.8	8.4	2.2	2	1	0	2	2	2	0	Uncharacterised	protein	family	(UPF0154)
COMP	PF11598.8	gi|289596513|ref|YP_003483209.1|	-	6.6	7.3	8.8	1.6	9.3	1.0	3.4	4	1	1	5	5	5	0	Cartilage	oligomeric	matrix	protein
BPD_transp_1	PF00528.22	gi|289596517|ref|YP_003483213.1|	-	1.8e-36	125.6	11.8	1.8e-36	125.6	11.8	1.7	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.22	gi|289596518|ref|YP_003483214.1|	-	7.3e-27	94.3	14.5	7.3e-27	94.3	14.5	2.0	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.7	gi|289596518|ref|YP_003483214.1|	-	6.1e-08	32.5	0.6	6.1e-08	32.5	0.6	3.1	3	0	0	3	3	3	1	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
ABC_tran	PF00005.27	gi|289596519|ref|YP_003483215.1|	-	2e-23	83.4	0.0	3.7e-23	82.5	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.12	gi|289596519|ref|YP_003483215.1|	-	5.7e-21	74.8	0.4	1.2e-20	73.7	0.4	1.6	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.6	gi|289596519|ref|YP_003483215.1|	-	1.4e-06	28.4	0.0	0.0002	21.3	0.0	2.1	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
CdhD	PF03599.16	gi|289596519|ref|YP_003483215.1|	-	0.00041	19.2	0.3	0.00058	18.7	0.3	1.1	1	0	0	1	1	1	1	CO	dehydrogenase/acetyl-CoA	synthase	delta	subunit
SMC_N	PF02463.19	gi|289596519|ref|YP_003483215.1|	-	0.001	18.6	0.9	0.0096	15.4	0.9	2.0	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA	PF00004.29	gi|289596519|ref|YP_003483215.1|	-	0.017	15.6	1.2	0.14	12.5	0.2	2.3	1	1	1	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
PRK	PF00485.18	gi|289596519|ref|YP_003483215.1|	-	0.041	13.6	0.0	0.079	12.7	0.0	1.4	1	1	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
NACHT	PF05729.12	gi|289596519|ref|YP_003483215.1|	-	0.055	13.4	0.0	0.091	12.7	0.0	1.3	1	0	0	1	1	1	0	NACHT	domain
ATP-synt_ab	PF00006.25	gi|289596519|ref|YP_003483215.1|	-	0.11	12.2	0.1	0.16	11.6	0.1	1.5	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_22	PF13401.6	gi|289596519|ref|YP_003483215.1|	-	0.12	12.7	0.5	1.5	9.1	0.1	2.2	2	0	0	2	2	2	0	AAA	domain
ABC_tran	PF00005.27	gi|289596520|ref|YP_003483216.1|	-	4.1e-35	121.3	0.0	5.6e-35	120.8	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.12	gi|289596520|ref|YP_003483216.1|	-	2.6e-18	66.3	0.0	5.2e-18	65.3	0.0	1.5	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_22	PF13401.6	gi|289596520|ref|YP_003483216.1|	-	8.1e-05	22.9	0.4	0.00051	20.3	0.4	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_21	PF13304.6	gi|289596520|ref|YP_003483216.1|	-	0.043	13.6	0.0	5	6.8	0.0	2.2	2	0	0	2	2	2	0	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
G-alpha	PF00503.20	gi|289596520|ref|YP_003483216.1|	-	0.074	12.2	0.0	0.087	12.0	0.0	1.1	1	0	0	1	1	1	0	G-protein	alpha	subunit
AAA_16	PF13191.6	gi|289596520|ref|YP_003483216.1|	-	0.11	12.9	0.1	0.18	12.2	0.1	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
Membralin	PF09746.9	gi|289596520|ref|YP_003483216.1|	-	0.11	11.5	0.0	0.14	11.2	0.0	1.1	1	0	0	1	1	1	0	Tumour-associated	protein
AAA_13	PF13166.6	gi|289596520|ref|YP_003483216.1|	-	0.12	11.0	0.1	1.4	7.5	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
tRNA-synt_2	PF00152.20	gi|289596521|ref|YP_003483217.1|	-	1.7e-86	290.2	0.0	2.1e-86	289.9	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.25	gi|289596521|ref|YP_003483217.1|	-	8.1e-14	51.4	1.6	1.7e-13	50.4	1.6	1.5	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA_anti_2	PF13742.6	gi|289596521|ref|YP_003483217.1|	-	0.15	12.3	0.0	0.3	11.3	0.0	1.6	1	0	0	1	1	1	0	OB-fold	nucleic	acid	binding	domain
DUF835	PF05763.12	gi|289596522|ref|YP_003483218.1|	-	5.5e-18	65.0	0.2	1.9e-17	63.2	0.2	1.9	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF835)
Anticodon_1	PF08264.13	gi|289596522|ref|YP_003483218.1|	-	4.4e-12	46.2	0.1	1.5e-11	44.5	0.1	1.9	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
zf-ribbon_3	PF13248.6	gi|289596522|ref|YP_003483218.1|	-	8.7e-11	40.9	20.0	6.7e-06	25.3	2.9	5.3	5	0	0	5	5	5	3	zinc-ribbon	domain
DZR	PF12773.7	gi|289596522|ref|YP_003483218.1|	-	2.8e-07	30.5	9.2	7.2e-05	22.7	0.5	3.2	3	0	0	3	3	3	2	Double	zinc	ribbon
zinc_ribbon_2	PF13240.6	gi|289596522|ref|YP_003483218.1|	-	9.4e-07	28.4	3.2	9.4e-07	28.4	3.2	4.9	5	0	0	5	5	5	2	zinc-ribbon	domain
zinc_ribbon_15	PF17032.5	gi|289596522|ref|YP_003483218.1|	-	1.1e-05	26.0	7.6	0.00049	20.8	0.6	3.6	3	1	0	3	3	3	1	zinc-ribbon	family
Prok-RING_1	PF14446.6	gi|289596522|ref|YP_003483218.1|	-	0.0031	17.4	2.6	0.0031	17.4	2.6	4.0	4	1	0	4	4	4	1	Prokaryotic	RING	finger	family	1
HHH_5	PF14520.6	gi|289596522|ref|YP_003483218.1|	-	0.0064	17.1	0.0	0.026	15.1	0.0	2.1	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
DUF2321	PF10083.9	gi|289596522|ref|YP_003483218.1|	-	0.0064	16.1	2.0	0.35	10.5	0.2	3.3	4	0	0	4	4	3	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2321)
zf-NADH-PPase	PF09297.11	gi|289596522|ref|YP_003483218.1|	-	0.013	15.1	0.2	0.013	15.1	0.2	5.3	5	1	1	6	6	6	0	NADH	pyrophosphatase	zinc	ribbon	domain
Cdd1	PF11731.8	gi|289596522|ref|YP_003483218.1|	-	0.016	15.5	0.0	0.043	14.0	0.0	1.8	1	0	0	1	1	1	0	Pathogenicity	locus
Ribosomal_L10	PF00466.20	gi|289596522|ref|YP_003483218.1|	-	0.034	14.3	1.6	2	8.6	0.1	3.7	4	0	0	4	4	4	0	Ribosomal	protein	L10
NRDD	PF13597.6	gi|289596522|ref|YP_003483218.1|	-	0.045	12.5	3.7	0.12	11.1	0.3	2.5	2	0	0	2	2	2	0	Anaerobic	ribonucleoside-triphosphate	reductase
Rad50_zn_hook	PF04423.14	gi|289596522|ref|YP_003483218.1|	-	0.062	13.1	7.9	5.3	7.0	0.4	5.2	4	0	0	4	4	4	0	Rad50	zinc	hook	motif
zinc-ribbons_6	PF07191.12	gi|289596522|ref|YP_003483218.1|	-	0.065	13.2	7.5	3	7.9	0.4	3.6	3	1	0	3	3	3	0	zinc-ribbons
YhfH	PF14149.6	gi|289596522|ref|YP_003483218.1|	-	0.077	13.0	16.9	0.089	12.8	0.1	5.4	6	0	0	6	6	6	0	YhfH-like	protein
DUF2616	PF11077.8	gi|289596522|ref|YP_003483218.1|	-	0.14	11.9	1.2	7	6.3	0.1	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2616)
DUF3723	PF12520.8	gi|289596522|ref|YP_003483218.1|	-	0.14	10.8	0.0	0.3	9.7	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3723)
DUF4332	PF14229.6	gi|289596522|ref|YP_003483218.1|	-	0.17	12.1	0.0	0.71	10.1	0.0	2.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4332)
Zn-ribbon_8	PF09723.10	gi|289596522|ref|YP_003483218.1|	-	0.34	11.1	20.2	29	4.9	2.1	5.8	4	2	1	5	5	5	0	Zinc	ribbon	domain
Prok-RING_4	PF14447.6	gi|289596522|ref|YP_003483218.1|	-	0.53	10.2	7.9	3.3	7.6	0.2	3.5	3	0	0	3	3	3	0	Prokaryotic	RING	finger	family	4
zf-RRPl_C4	PF17026.5	gi|289596522|ref|YP_003483218.1|	-	1.1	9.4	4.8	1.3	9.2	0.2	2.9	3	0	0	3	3	2	0	Putative	ribonucleoprotein	zinc-finger	pf	C4	type
DUF35_N	PF12172.8	gi|289596522|ref|YP_003483218.1|	-	1.5	8.8	15.2	1.3	8.9	3.9	3.6	4	0	0	4	4	3	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
TackOD1	PF18551.1	gi|289596522|ref|YP_003483218.1|	-	2.2	7.9	7.1	37	3.9	0.1	3.5	4	0	0	4	4	3	0	Thaumarchaeal	output	domain	1
DNA_ligase_ZBD	PF03119.16	gi|289596522|ref|YP_003483218.1|	-	3.2	7.9	18.3	22	5.2	0.2	5.2	4	1	0	4	4	4	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-C4_Topoisom	PF01396.19	gi|289596522|ref|YP_003483218.1|	-	3.8	7.4	13.7	6.5	6.6	0.1	5.1	5	0	0	5	5	5	0	Topoisomerase	DNA	binding	C4	zinc	finger
RecR	PF02132.15	gi|289596522|ref|YP_003483218.1|	-	5	6.8	20.5	2.2	7.9	0.1	4.9	4	1	1	5	5	5	0	RecR	protein
GFA	PF04828.14	gi|289596522|ref|YP_003483218.1|	-	5.8	7.3	7.3	6.6	7.1	0.4	3.9	3	2	2	5	5	5	0	Glutathione-dependent	formaldehyde-activating	enzyme
zf-C2HC5	PF06221.13	gi|289596522|ref|YP_003483218.1|	-	9.2	6.3	9.2	18	5.4	0.4	3.8	3	1	0	3	3	3	0	Putative	zinc	finger	motif,	C2HC5-type
DUF126	PF01989.16	gi|289596523|ref|YP_003483219.1|	-	1.8e-20	72.5	0.0	2.8e-20	71.9	0.0	1.3	1	0	0	1	1	1	1	Aconitase	X	swivel	domain
DUF521	PF04412.13	gi|289596524|ref|YP_003483220.1|	-	2.4e-139	464.5	0.0	2.7e-139	464.3	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF521)
QRPTase_C	PF01729.19	gi|289596524|ref|YP_003483220.1|	-	0.11	12.3	0.0	0.2	11.4	0.0	1.5	1	0	0	1	1	1	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
AICARFT_IMPCHas	PF01808.18	gi|289596525|ref|YP_003483221.1|	-	7.1e-117	390.1	0.1	9e-117	389.7	0.1	1.1	1	0	0	1	1	1	1	AICARFT/IMPCHase	bienzyme
MGS	PF02142.22	gi|289596525|ref|YP_003483221.1|	-	2e-21	76.0	0.4	8.2e-21	74.0	0.1	2.2	2	0	0	2	2	2	1	MGS-like	domain
UPF0180	PF03698.13	gi|289596525|ref|YP_003483221.1|	-	0.061	13.5	0.1	0.34	11.1	0.0	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0180)
Response_reg	PF00072.24	gi|289596526|ref|YP_003483222.1|	-	1.7e-15	57.2	0.0	2.6e-15	56.6	0.0	1.4	1	1	0	1	1	1	1	Response	regulator	receiver	domain
zf-C2H2_assoc	PF16606.5	gi|289596527|ref|YP_003483223.1|	-	2.4	8.4	6.1	3.3	8.0	0.4	2.1	1	1	1	2	2	2	0	Unstructured	conserved,	between	two	C2H2-type	zinc-fingers
TPR_12	PF13424.6	gi|289596528|ref|YP_003483224.1|	-	4e-27	94.3	5.9	5.9e-10	39.3	0.9	5.6	2	1	5	8	8	8	5	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|289596528|ref|YP_003483224.1|	-	4.5e-16	57.6	38.1	0.0017	18.3	0.9	9.0	9	1	0	9	9	8	5	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|289596528|ref|YP_003483224.1|	-	7.4e-15	53.8	29.1	0.0011	19.0	0.3	8.1	7	0	0	7	7	7	4	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|289596528|ref|YP_003483224.1|	-	1.2e-13	50.2	33.2	0.00039	20.1	0.8	7.9	8	0	0	8	8	8	4	Tetratricopeptide	repeat
TPR_MalT	PF17874.1	gi|289596528|ref|YP_003483224.1|	-	2.9e-10	40.0	0.0	2e-06	27.4	0.0	2.7	1	1	1	2	2	2	2	MalT-like	TPR	region
TPR_10	PF13374.6	gi|289596528|ref|YP_003483224.1|	-	3.6e-09	36.2	5.7	0.39	10.6	0.1	6.7	6	0	0	6	6	6	2	Tetratricopeptide	repeat
AAA_22	PF13401.6	gi|289596528|ref|YP_003483224.1|	-	5.4e-09	36.4	0.0	1.7e-08	34.8	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.6	gi|289596528|ref|YP_003483224.1|	-	1.7e-08	35.0	0.0	6.7e-08	33.1	0.0	1.9	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_14	PF13173.6	gi|289596528|ref|YP_003483224.1|	-	1.7e-06	28.1	2.2	1.7e-06	28.1	2.2	2.9	2	2	1	3	3	2	1	AAA	domain
TPR_16	PF13432.6	gi|289596528|ref|YP_003483224.1|	-	3.5e-05	24.4	1.4	0.36	11.5	0.0	5.1	4	1	1	5	5	4	1	Tetratricopeptide	repeat
TPR_11	PF13414.6	gi|289596528|ref|YP_003483224.1|	-	4.4e-05	23.1	22.9	0.00077	19.1	0.3	6.4	7	0	0	7	7	7	2	TPR	repeat
TPR_7	PF13176.6	gi|289596528|ref|YP_003483224.1|	-	0.00028	20.7	5.9	1.4	9.2	0.2	5.8	6	0	0	6	6	5	1	Tetratricopeptide	repeat
ANAPC5	PF12862.7	gi|289596528|ref|YP_003483224.1|	-	0.00041	20.4	0.0	0.013	15.6	0.0	2.8	1	1	1	2	2	2	1	Anaphase-promoting	complex	subunit	5
AAA_24	PF13479.6	gi|289596528|ref|YP_003483224.1|	-	0.0009	19.0	0.0	0.013	15.2	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
TPR_19	PF14559.6	gi|289596528|ref|YP_003483224.1|	-	0.0017	18.8	0.2	2.6	8.6	0.0	3.6	3	1	1	4	4	3	1	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|289596528|ref|YP_003483224.1|	-	0.002	18.6	6.8	13	6.7	0.0	6.3	6	0	0	6	6	5	0	Tetratricopeptide	repeat
RsgA_GTPase	PF03193.16	gi|289596528|ref|YP_003483224.1|	-	0.0025	17.7	0.2	0.011	15.6	0.0	2.2	2	0	0	2	2	2	1	RsgA	GTPase
HTH_Crp_2	PF13545.6	gi|289596528|ref|YP_003483224.1|	-	0.003	17.5	0.0	0.011	15.7	0.0	2.0	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
TPR_14	PF13428.6	gi|289596528|ref|YP_003483224.1|	-	0.0032	18.1	1.6	1.1e+02	4.0	0.0	6.3	7	0	0	7	7	6	0	Tetratricopeptide	repeat
cobW	PF02492.19	gi|289596528|ref|YP_003483224.1|	-	0.0066	16.0	0.1	0.98	9.0	0.1	2.3	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
MIT	PF04212.18	gi|289596528|ref|YP_003483224.1|	-	0.007	16.4	12.1	1.3	9.1	0.1	6.2	6	0	0	6	6	5	1	MIT	(microtubule	interacting	and	transport)	domain
ATPase	PF06745.13	gi|289596528|ref|YP_003483224.1|	-	0.008	15.6	0.9	0.016	14.5	0.1	2.0	2	1	0	2	2	1	1	KaiC
CbiA	PF01656.23	gi|289596528|ref|YP_003483224.1|	-	0.026	14.6	0.0	0.088	12.9	0.0	2.3	1	1	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA	PF00004.29	gi|289596528|ref|YP_003483224.1|	-	0.032	14.7	0.1	0.11	12.9	0.1	1.9	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
SNAP	PF14938.6	gi|289596528|ref|YP_003483224.1|	-	0.036	13.5	10.1	1.1	8.6	0.1	3.5	1	1	2	3	3	3	0	Soluble	NSF	attachment	protein,	SNAP
NB-ARC	PF00931.22	gi|289596528|ref|YP_003483224.1|	-	0.045	12.9	1.1	0.31	10.2	1.1	2.3	1	1	0	1	1	1	0	NB-ARC	domain
Guanylate_cyc	PF00211.20	gi|289596528|ref|YP_003483224.1|	-	0.049	13.3	0.1	8	6.0	0.0	2.5	2	0	0	2	2	2	0	Adenylate	and	Guanylate	cyclase	catalytic	domain
Rad17	PF03215.15	gi|289596528|ref|YP_003483224.1|	-	0.051	13.5	0.3	0.14	12.1	0.3	1.7	1	0	0	1	1	1	0	Rad17	P-loop	domain
DUF4810	PF16068.5	gi|289596528|ref|YP_003483224.1|	-	0.058	14.0	0.8	71	4.1	0.1	4.0	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4810)
NACHT	PF05729.12	gi|289596528|ref|YP_003483224.1|	-	0.066	13.1	0.8	0.25	11.3	0.8	1.9	1	1	0	1	1	1	0	NACHT	domain
SRP54	PF00448.22	gi|289596528|ref|YP_003483224.1|	-	0.078	12.6	0.0	0.2	11.3	0.0	1.7	2	0	0	2	2	1	0	SRP54-type	protein,	GTPase	domain
T2SSE	PF00437.20	gi|289596528|ref|YP_003483224.1|	-	0.1	11.6	0.0	0.19	10.8	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
ANAPC3	PF12895.7	gi|289596528|ref|YP_003483224.1|	-	0.2	11.9	4.5	0.71	10.1	0.0	3.7	2	1	1	3	3	3	0	Anaphase-promoting	complex,	cyclosome,	subunit	3
DUF357	PF04010.13	gi|289596528|ref|YP_003483224.1|	-	0.23	11.5	5.7	0.37	10.9	0.3	3.6	3	0	0	3	3	2	0	Protein	of	unknown	function	(DUF357)
KAP_NTPase	PF07693.14	gi|289596528|ref|YP_003483224.1|	-	0.63	9.2	5.6	2	7.6	0.4	2.8	2	0	0	2	2	2	0	KAP	family	P-loop	domain
PPR	PF01535.20	gi|289596528|ref|YP_003483224.1|	-	0.84	10.0	9.5	4.9	7.6	0.1	4.8	5	0	0	5	5	3	0	PPR	repeat
Sel1	PF08238.12	gi|289596528|ref|YP_003483224.1|	-	9.1	7.1	9.7	0.68	10.7	0.1	4.0	5	0	0	5	5	2	0	Sel1	repeat
Metallophos	PF00149.28	gi|289596529|ref|YP_003483225.1|	-	9.5e-14	52.4	0.1	1.3e-13	51.9	0.1	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|289596529|ref|YP_003483225.1|	-	3.2e-10	40.4	0.0	7.3e-10	39.3	0.0	1.6	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
DUF5092	PF17010.5	gi|289596529|ref|YP_003483225.1|	-	0.034	14.1	2.2	0.038	13.9	0.5	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF5092)
DUF5311	PF17238.2	gi|289596529|ref|YP_003483225.1|	-	0.12	12.2	0.0	0.21	11.4	0.0	1.3	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5311)
AAA_23	PF13476.6	gi|289596530|ref|YP_003483226.1|	-	4.7e-23	82.7	10.2	4.7e-23	82.7	10.2	6.0	1	1	4	5	5	2	1	AAA	domain
Rad50_zn_hook	PF04423.14	gi|289596530|ref|YP_003483226.1|	-	7.6e-11	41.7	7.0	7.6e-11	41.7	7.0	8.9	12	1	0	12	12	11	1	Rad50	zinc	hook	motif
AAA_15	PF13175.6	gi|289596530|ref|YP_003483226.1|	-	1.4e-08	34.9	33.0	1.4e-08	34.9	33.0	3.4	1	1	2	3	3	1	1	AAA	ATPase	domain
SMC_N	PF02463.19	gi|289596530|ref|YP_003483226.1|	-	3.5e-07	29.9	33.4	2.9e-05	23.6	0.1	3.2	3	1	0	3	3	3	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.6	gi|289596530|ref|YP_003483226.1|	-	9.9e-07	28.4	0.0	1.7e-06	27.7	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
TPR_MLP1_2	PF07926.12	gi|289596530|ref|YP_003483226.1|	-	4.8e-05	23.4	84.0	0.00051	20.1	15.9	4.6	2	2	1	4	4	4	3	TPR/MLP1/MLP2-like	protein
NPV_P10	PF05531.12	gi|289596530|ref|YP_003483226.1|	-	9.5e-05	22.8	22.9	0.08	13.4	0.1	7.0	4	2	3	7	7	7	2	Nucleopolyhedrovirus	P10	protein
Tropomyosin_1	PF12718.7	gi|289596530|ref|YP_003483226.1|	-	0.00039	20.6	31.8	0.00039	20.6	31.8	5.3	1	1	4	5	5	4	2	Tropomyosin	like
Spc7	PF08317.11	gi|289596530|ref|YP_003483226.1|	-	0.0011	17.9	105.6	0.0022	16.9	14.4	5.9	2	1	5	7	7	7	5	Spc7	kinetochore	protein
AAA_13	PF13166.6	gi|289596530|ref|YP_003483226.1|	-	0.0032	16.2	86.9	0.16	10.6	18.2	4.3	2	1	3	5	5	5	4	AAA	domain
AAA_21	PF13304.6	gi|289596530|ref|YP_003483226.1|	-	0.014	15.2	0.1	0.014	15.2	0.1	4.2	2	1	2	4	4	2	0	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
GAS	PF13851.6	gi|289596530|ref|YP_003483226.1|	-	0.31	10.4	110.4	0.23	10.8	10.4	7.1	1	1	4	6	6	6	0	Growth-arrest	specific	micro-tubule	binding
Fez1	PF06818.15	gi|289596530|ref|YP_003483226.1|	-	0.35	11.3	87.2	0.49	10.8	29.1	4.7	1	1	4	5	5	5	0	Fez1
Baculo_PEP_C	PF04513.12	gi|289596530|ref|YP_003483226.1|	-	0.72	9.9	15.7	6.1	6.9	0.3	5.1	2	2	2	4	4	4	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
MAD	PF05557.13	gi|289596530|ref|YP_003483226.1|	-	0.72	8.1	99.0	2.3	6.5	48.2	3.1	1	1	2	3	3	3	0	Mitotic	checkpoint	protein
DASH_Dam1	PF08653.10	gi|289596530|ref|YP_003483226.1|	-	1	9.2	11.0	0.53	10.1	0.2	5.7	5	1	2	7	7	7	0	DASH	complex	subunit	Dam1
BLOC1_2	PF10046.9	gi|289596530|ref|YP_003483226.1|	-	1.7	9.0	70.0	0.4	11.0	7.8	8.1	3	2	4	8	8	8	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
AAA_16	PF13191.6	gi|289596530|ref|YP_003483226.1|	-	2.7	8.3	0.0	2.7	8.3	0.0	3.3	3	1	0	3	3	2	0	AAA	ATPase	domain
Occludin_ELL	PF07303.13	gi|289596530|ref|YP_003483226.1|	-	3	8.6	70.5	1.8	9.4	11.6	6.8	1	1	4	7	7	7	0	Occludin	homology	domain
Sec20	PF03908.13	gi|289596530|ref|YP_003483226.1|	-	7.2	6.6	26.8	0.55	10.2	0.7	6.3	3	2	3	6	6	6	0	Sec20
DUF5317	PF17248.2	gi|289596531|ref|YP_003483227.1|	-	0.026	14.5	1.2	0.026	14.5	1.2	1.7	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF5317)
YwiC	PF14256.6	gi|289596531|ref|YP_003483227.1|	-	0.11	12.8	3.1	0.11	12.8	0.9	1.9	2	0	0	2	2	2	0	YwiC-like	protein
VanZ	PF04892.12	gi|289596532|ref|YP_003483228.1|	-	1.4e-11	45.1	5.1	4e-11	43.7	5.1	1.7	1	1	0	1	1	1	1	VanZ	like	family
DUF4013	PF13197.6	gi|289596532|ref|YP_003483228.1|	-	0.0093	15.8	2.8	0.013	15.4	2.8	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4013)
TPR_1	PF00515.28	gi|289596533|ref|YP_003483229.1|	-	6.2e-82	266.4	61.6	4e-09	35.9	1.0	15.6	16	0	0	16	16	15	11	Tetratricopeptide	repeat
TPR_2	PF07719.17	gi|289596533|ref|YP_003483229.1|	-	1.5e-70	227.8	60.2	4.2e-08	32.7	0.3	16.6	16	1	1	17	17	16	13	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|289596533|ref|YP_003483229.1|	-	6.9e-63	203.7	66.5	2.2e-06	27.4	0.7	16.9	16	1	1	17	17	17	13	Tetratricopeptide	repeat
TPR_11	PF13414.6	gi|289596533|ref|YP_003483229.1|	-	1.1e-48	162.6	58.6	2.9e-13	49.2	0.8	14.0	8	3	6	14	14	14	10	TPR	repeat
TPR_19	PF14559.6	gi|289596533|ref|YP_003483229.1|	-	1.3e-45	153.8	12.7	5.5e-09	36.4	0.2	10.7	5	5	6	12	12	12	9	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|289596533|ref|YP_003483229.1|	-	1.1e-40	138.0	11.9	6.2e-11	42.8	0.3	10.0	7	4	2	10	10	9	5	Tetratricopeptide	repeat
TPR_12	PF13424.6	gi|289596533|ref|YP_003483229.1|	-	1e-38	131.4	30.5	2.3e-08	34.2	0.2	13.3	7	3	7	14	14	13	8	Tetratricopeptide	repeat
TPR_7	PF13176.6	gi|289596533|ref|YP_003483229.1|	-	2.9e-38	127.1	26.4	0.0017	18.2	0.0	15.9	14	1	2	16	16	16	7	Tetratricopeptide	repeat
TPR_17	PF13431.6	gi|289596533|ref|YP_003483229.1|	-	4.7e-37	123.7	33.7	1.9e-05	24.7	0.4	11.7	11	1	1	12	12	11	7	Tetratricopeptide	repeat
ANAPC3	PF12895.7	gi|289596533|ref|YP_003483229.1|	-	5.4e-37	125.9	26.8	7.2e-08	32.6	0.7	7.8	5	1	2	7	7	7	4	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_14	PF13428.6	gi|289596533|ref|YP_003483229.1|	-	1.2e-36	122.2	10.5	0.0012	19.5	0.0	13.3	5	2	10	15	15	15	8	Tetratricopeptide	repeat
TPR_10	PF13374.6	gi|289596533|ref|YP_003483229.1|	-	1.5e-25	88.3	24.0	0.0024	17.7	0.1	14.1	16	0	0	16	16	14	5	Tetratricopeptide	repeat
TPR_6	PF13174.6	gi|289596533|ref|YP_003483229.1|	-	1.2e-21	75.9	26.4	0.0081	16.7	0.0	12.5	13	0	0	13	13	12	4	Tetratricopeptide	repeat
TPR_9	PF13371.6	gi|289596533|ref|YP_003483229.1|	-	7.8e-20	70.8	1.3	0.00067	19.8	0.0	7.6	6	2	2	8	8	8	4	Tetratricopeptide	repeat
SRP_TPR_like	PF17004.5	gi|289596533|ref|YP_003483229.1|	-	1.6e-12	47.5	37.7	1.8e-05	24.7	0.3	6.9	2	2	4	6	6	6	4	Putative	TPR-like	repeat
TPR_4	PF07721.14	gi|289596533|ref|YP_003483229.1|	-	1.2e-11	44.0	0.0	0.82	10.5	0.7	8.3	9	0	0	9	9	8	1	Tetratricopeptide	repeat
TPR_15	PF13429.6	gi|289596533|ref|YP_003483229.1|	-	2.2e-10	40.2	7.9	7e-09	35.3	1.4	4.1	4	2	1	5	5	5	1	Tetratricopeptide	repeat
PPR	PF01535.20	gi|289596533|ref|YP_003483229.1|	-	2.5e-07	30.5	25.3	5	7.6	0.0	12.1	13	0	0	13	13	12	0	PPR	repeat
BTAD	PF03704.17	gi|289596533|ref|YP_003483229.1|	-	3.2e-07	30.9	3.1	0.76	10.2	0.0	5.9	5	2	2	7	7	7	1	Bacterial	transcriptional	activator	domain
ANAPC5	PF12862.7	gi|289596533|ref|YP_003483229.1|	-	4.2e-07	30.0	4.3	0.014	15.4	0.0	6.1	6	1	1	7	7	6	1	Anaphase-promoting	complex	subunit	5
TPR_20	PF14561.6	gi|289596533|ref|YP_003483229.1|	-	7.5e-07	29.4	1.0	3.2	8.1	0.0	6.8	5	3	3	8	8	8	1	Tetratricopeptide	repeat
TPR_21	PF09976.9	gi|289596533|ref|YP_003483229.1|	-	1.1e-06	28.5	4.5	0.017	14.8	0.3	6.0	4	2	4	8	8	7	1	Tetratricopeptide	repeat-like	domain
DUF3856	PF12968.7	gi|289596533|ref|YP_003483229.1|	-	4e-06	26.9	17.1	0.098	12.7	0.2	7.4	4	3	3	7	7	7	2	Domain	of	Unknown	Function	(DUF3856)
TPR_MalT	PF17874.1	gi|289596533|ref|YP_003483229.1|	-	3.7e-05	23.3	0.3	2.8	7.2	0.0	5.1	3	1	0	5	5	5	1	MalT-like	TPR	region
SHNi-TPR	PF10516.9	gi|289596533|ref|YP_003483229.1|	-	0.00051	19.4	0.1	0.015	14.8	0.1	3.5	3	0	0	3	3	2	1	SHNi-TPR
TPR_3	PF07720.12	gi|289596533|ref|YP_003483229.1|	-	0.00063	19.7	26.6	0.85	9.7	0.7	9.2	10	1	0	10	10	9	2	Tetratricopeptide	repeat
Fis1_TPR_C	PF14853.6	gi|289596533|ref|YP_003483229.1|	-	0.0035	17.4	0.0	0.0035	17.4	0.0	12.8	13	3	4	17	17	16	3	Fis1	C-terminal	tetratricopeptide	repeat
Coatomer_E	PF04733.14	gi|289596533|ref|YP_003483229.1|	-	0.0052	16.2	6.1	0.28	10.6	0.2	4.8	4	2	3	7	7	7	2	Coatomer	epsilon	subunit
RPN7	PF10602.9	gi|289596533|ref|YP_003483229.1|	-	0.011	15.4	18.4	2.4	7.8	0.8	6.8	5	2	3	8	8	8	0	26S	proteasome	subunit	RPN7
FAT	PF02259.23	gi|289596533|ref|YP_003483229.1|	-	0.025	13.8	9.7	0.049	12.8	1.8	3.7	2	2	1	4	4	4	0	FAT	domain
ChAPs	PF09295.10	gi|289596533|ref|YP_003483229.1|	-	0.028	13.4	0.0	5.6	5.9	0.0	2.6	1	1	1	2	2	2	0	ChAPs	(Chs5p-Arf1p-binding	proteins)
PPTA	PF01239.22	gi|289596533|ref|YP_003483229.1|	-	0.028	14.1	1.8	7.2	6.5	0.0	3.5	3	0	0	3	3	3	0	Protein	prenyltransferase	alpha	subunit	repeat
DUF1951	PF09188.10	gi|289596533|ref|YP_003483229.1|	-	0.039	13.9	0.5	0.1	12.5	0.5	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1951)
DUF5588	PF17826.1	gi|289596533|ref|YP_003483229.1|	-	0.1	11.4	0.3	30	3.4	0.0	3.6	3	1	0	4	4	4	0	Family	of	unknown	function	(DUF5588)
MIT	PF04212.18	gi|289596533|ref|YP_003483229.1|	-	0.11	12.6	32.6	0.79	9.8	0.6	9.6	10	1	1	11	11	10	0	MIT	(microtubule	interacting	and	transport)	domain
HTH_Bact	PF18768.1	gi|289596533|ref|YP_003483229.1|	-	0.13	11.8	7.4	17	5.1	0.1	5.3	5	0	0	5	5	4	0	Helix-turn-helix	bacterial	domain
PknG_TPR	PF16918.5	gi|289596533|ref|YP_003483229.1|	-	0.18	10.5	0.1	8	5.1	0.0	3.2	4	0	0	4	4	4	0	Protein	kinase	G	tetratricopeptide	repeat
SNAP	PF14938.6	gi|289596533|ref|YP_003483229.1|	-	0.26	10.7	19.4	1.9	7.8	4.2	5.1	3	2	2	5	5	5	0	Soluble	NSF	attachment	protein,	SNAP
Clathrin	PF00637.20	gi|289596533|ref|YP_003483229.1|	-	0.27	11.1	13.6	1.2	9.0	0.9	4.9	4	2	1	5	5	4	0	Region	in	Clathrin	and	VPS
Pep3_Vps18	PF05131.14	gi|289596533|ref|YP_003483229.1|	-	0.3	10.9	3.6	6.7	6.5	0.0	4.1	5	0	0	5	5	4	0	Pep3/Vps18/deep	orange	family
EST1_DNA_bind	PF10373.9	gi|289596533|ref|YP_003483229.1|	-	0.75	9.2	4.8	6.5	6.1	0.0	2.9	2	1	1	3	3	3	0	Est1	DNA/RNA	binding	domain
PPR_2	PF13041.6	gi|289596533|ref|YP_003483229.1|	-	4.2	7.6	16.9	16	5.7	0.0	7.3	10	0	0	10	10	6	0	PPR	repeat	family
PUA	PF01472.20	gi|289596534|ref|YP_003483230.1|	-	1e-20	73.5	0.8	1e-20	73.5	0.8	1.5	2	0	0	2	2	2	1	PUA	domain
DUF1947	PF09183.10	gi|289596534|ref|YP_003483230.1|	-	2.1e-09	37.5	1.3	4.5e-09	36.5	1.3	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1947)
UPF0113	PF03657.13	gi|289596534|ref|YP_003483230.1|	-	0.00019	21.7	0.1	0.00033	20.9	0.1	1.4	1	0	0	1	1	1	1	UPF0113	PUA	domain
Pre-PUA	PF17832.1	gi|289596534|ref|YP_003483230.1|	-	0.0074	16.9	0.4	0.015	16.0	0.3	1.7	2	1	0	2	2	2	1	Pre-PUA-like	domain
PUA_3	PF17785.1	gi|289596534|ref|YP_003483230.1|	-	0.14	12.0	0.1	0.14	12.0	0.1	2.0	2	0	0	2	2	2	0	PUA-like	domain
Ribosomal_60s	PF00428.19	gi|289596535|ref|YP_003483231.1|	-	3e-17	63.0	22.2	3.4e-17	62.8	22.2	1.0	1	0	0	1	1	1	1	60s	Acidic	ribosomal	protein
Cytomega_UL84	PF06284.11	gi|289596535|ref|YP_003483231.1|	-	0.035	12.6	5.9	0.038	12.4	5.9	1.0	1	0	0	1	1	1	0	Cytomegalovirus	UL84	protein
LEA_3	PF03242.13	gi|289596535|ref|YP_003483231.1|	-	0.13	12.9	1.8	0.2	12.4	1.8	1.2	1	0	0	1	1	1	0	Late	embryogenesis	abundant	protein
DUF3824	PF12868.7	gi|289596535|ref|YP_003483231.1|	-	0.81	10.4	7.2	1.1	9.9	7.2	1.1	1	0	0	1	1	1	0	Domain	of	unknwon	function	(DUF3824)
Ribosomal_L10	PF00466.20	gi|289596536|ref|YP_003483232.1|	-	1.8e-24	85.8	2.6	3.8e-24	84.7	2.6	1.6	1	0	0	1	1	1	1	Ribosomal	protein	L10
RL10P_insert	PF17777.1	gi|289596536|ref|YP_003483232.1|	-	1e-22	79.9	0.3	1.7e-22	79.1	0.3	1.4	1	0	0	1	1	1	1	Insertion	domain	in	60S	ribosomal	protein	L10P
7TMR-HDED	PF07697.11	gi|289596536|ref|YP_003483232.1|	-	0.053	13.6	0.5	0.053	13.6	0.5	2.8	3	0	0	3	3	3	0	7TM-HD	extracellular
WRNPLPNID	PF15017.6	gi|289596536|ref|YP_003483232.1|	-	1.1	10.2	10.2	2.5	9.0	10.2	1.5	1	0	0	1	1	1	0	Putative	WW-binding	domain	and	destruction	box
Ribosomal_60s	PF00428.19	gi|289596536|ref|YP_003483232.1|	-	3.7	8.2	13.4	2.9	8.5	9.4	2.5	2	1	0	2	2	2	0	60s	Acidic	ribosomal	protein
Ribosomal_L1	PF00687.21	gi|289596537|ref|YP_003483233.1|	-	1.1e-46	159.1	0.5	1.4e-46	158.8	0.5	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L1p/L10e	family
Ribosomal_L11	PF00298.19	gi|289596538|ref|YP_003483234.1|	-	1e-24	86.8	0.5	1e-24	86.8	0.5	1.5	2	0	0	2	2	2	1	Ribosomal	protein	L11,	RNA	binding	domain
Ribosomal_L11_N	PF03946.14	gi|289596538|ref|YP_003483234.1|	-	3.4e-24	84.4	1.6	6.7e-24	83.5	1.6	1.5	1	0	0	1	1	1	1	Ribosomal	protein	L11,	N-terminal	domain
TAL_effector	PF03377.13	gi|289596538|ref|YP_003483234.1|	-	0.027	14.8	0.0	2.3	8.6	0.0	2.3	2	0	0	2	2	2	0	TAL	effector	repeat
Spt5-NGN	PF03439.13	gi|289596539|ref|YP_003483235.1|	-	2.7e-19	68.8	0.3	7.3e-19	67.4	0.1	1.9	2	0	0	2	2	2	1	Early	transcription	elongation	factor	of	RNA	pol	II,	NGN	section
KOW	PF00467.29	gi|289596539|ref|YP_003483235.1|	-	2.6e-05	24.0	0.7	2.6e-05	24.0	0.7	2.5	3	0	0	3	3	3	1	KOW	motif
NusG	PF02357.19	gi|289596539|ref|YP_003483235.1|	-	0.011	16.2	1.1	0.037	14.5	0.2	2.4	2	1	0	2	2	2	0	Transcription	termination	factor	nusG
DUF916	PF06030.12	gi|289596539|ref|YP_003483235.1|	-	0.089	12.9	0.3	0.23	11.5	0.3	1.7	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF916)
Transglut_N	PF00868.20	gi|289596539|ref|YP_003483235.1|	-	0.12	12.7	0.0	0.56	10.6	0.1	2.0	1	1	0	1	1	1	0	Transglutaminase	family
SecE	PF00584.20	gi|289596540|ref|YP_003483236.1|	-	1.3e-05	25.0	0.0	1.8e-05	24.6	0.0	1.2	1	0	0	1	1	1	1	SecE/Sec61-gamma	subunits	of	protein	translocation	complex
Tubulin	PF00091.25	gi|289596541|ref|YP_003483237.1|	-	3.6e-41	141.6	0.1	6.4e-41	140.7	0.1	1.4	1	0	0	1	1	1	1	Tubulin/FtsZ	family,	GTPase	domain
FtsZ_C	PF12327.8	gi|289596541|ref|YP_003483237.1|	-	1.5e-33	115.0	2.2	3.8e-33	113.6	2.2	1.8	1	0	0	1	1	1	1	FtsZ	family,	C-terminal	domain
Tubulin_2	PF13809.6	gi|289596541|ref|YP_003483237.1|	-	0.092	11.9	6.8	0.12	11.6	1.6	2.3	1	1	0	2	2	2	0	Tubulin	like
ZT_dimer	PF16916.5	gi|289596541|ref|YP_003483237.1|	-	0.1	12.7	0.2	27	5.0	0.0	3.0	2	0	0	2	2	2	0	Dimerisation	domain	of	Zinc	Transporter
Na_H_Exchanger	PF00999.21	gi|289596542|ref|YP_003483238.1|	-	2.3e-47	161.6	43.5	3.5e-47	161.0	43.5	1.2	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
TrkA_N	PF02254.18	gi|289596542|ref|YP_003483238.1|	-	1.7e-20	73.4	0.2	2.5e-20	72.9	0.2	1.3	1	0	0	1	1	1	1	TrkA-N	domain
ApbA	PF02558.16	gi|289596542|ref|YP_003483238.1|	-	0.0018	17.9	0.1	0.0029	17.3	0.1	1.3	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
adh_short_C2	PF13561.6	gi|289596543|ref|YP_003483239.1|	-	1.2e-54	185.3	0.1	1.6e-54	185.0	0.1	1.1	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.25	gi|289596543|ref|YP_003483239.1|	-	1.3e-40	139.0	0.0	1.6e-40	138.7	0.0	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.10	gi|289596543|ref|YP_003483239.1|	-	1e-05	25.5	0.0	1.7e-05	24.8	0.0	1.3	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.21	gi|289596543|ref|YP_003483239.1|	-	0.00033	20.2	0.0	0.0023	17.5	0.0	1.9	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
3Beta_HSD	PF01073.19	gi|289596543|ref|YP_003483239.1|	-	0.07	12.1	0.0	0.093	11.7	0.0	1.2	1	0	0	1	1	1	0	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
3HCDH_N	PF02737.18	gi|289596543|ref|YP_003483239.1|	-	0.078	12.9	0.0	0.26	11.2	0.0	1.8	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
MTS	PF05175.14	gi|289596543|ref|YP_003483239.1|	-	0.1	12.2	0.0	0.2	11.2	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	small	domain
NUDIX	PF00293.28	gi|289596544|ref|YP_003483240.1|	-	2.7e-15	56.6	0.3	3.5e-15	56.2	0.3	1.1	1	0	0	1	1	1	1	NUDIX	domain
DUF2746	PF10874.8	gi|289596544|ref|YP_003483240.1|	-	0.12	12.8	0.0	1	9.8	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2746)
Asp_Glu_race	PF01177.22	gi|289596545|ref|YP_003483241.1|	-	1.6e-48	165.5	0.0	1.9e-48	165.3	0.0	1.0	1	0	0	1	1	1	1	Asp/Glu/Hydantoin	racemase
UDPG_MGDP_dh_C	PF03720.15	gi|289596545|ref|YP_003483241.1|	-	0.026	15.0	0.3	7	7.1	0.0	2.4	2	1	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
UPF0180	PF03698.13	gi|289596545|ref|YP_003483241.1|	-	0.067	13.4	0.1	0.71	10.1	0.0	2.3	2	1	0	2	2	2	0	Uncharacterised	protein	family	(UPF0180)
Isochorismatase	PF00857.20	gi|289596545|ref|YP_003483241.1|	-	0.16	12.1	0.0	0.23	11.6	0.0	1.3	1	0	0	1	1	1	0	Isochorismatase	family
SfsA	PF03749.13	gi|289596546|ref|YP_003483242.1|	-	4.4e-41	140.0	0.0	6.3e-41	139.5	0.0	1.2	1	0	0	1	1	1	1	Sugar	fermentation	stimulation	protein	RE	domain
SfsA_N	PF17746.1	gi|289596546|ref|YP_003483242.1|	-	6e-23	80.8	0.1	1.7e-22	79.3	0.1	1.8	2	0	0	2	2	2	1	SfsA	N-terminal	OB	domain
HTH_AsnC-type	PF13404.6	gi|289596547|ref|YP_003483243.1|	-	8.3e-17	60.7	0.1	1.4e-16	60.0	0.1	1.4	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_24	PF13412.6	gi|289596547|ref|YP_003483243.1|	-	1.4e-16	59.7	0.7	2.2e-16	59.1	0.7	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.12	gi|289596547|ref|YP_003483243.1|	-	9e-11	41.6	0.6	1.5e-10	40.9	0.6	1.4	1	0	0	1	1	1	1	HTH	domain
AsnC_trans_reg	PF01037.21	gi|289596547|ref|YP_003483243.1|	-	4.2e-10	39.5	0.0	9.9e-10	38.3	0.0	1.6	2	0	0	2	2	1	1	Lrp/AsnC	ligand	binding	domain
HTH_Mga	PF08280.11	gi|289596547|ref|YP_003483243.1|	-	3.2e-06	27.1	0.0	5.3e-06	26.4	0.0	1.4	1	0	0	1	1	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_Crp_2	PF13545.6	gi|289596547|ref|YP_003483243.1|	-	5.3e-06	26.3	0.1	9.6e-06	25.5	0.1	1.4	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_DeoR	PF08220.12	gi|289596547|ref|YP_003483243.1|	-	2.3e-05	24.1	0.3	4.1e-05	23.2	0.3	1.4	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
HxlR	PF01638.17	gi|289596547|ref|YP_003483243.1|	-	3.8e-05	23.5	0.4	7.6e-05	22.5	0.2	1.6	2	0	0	2	2	2	1	HxlR-like	helix-turn-helix
MarR	PF01047.22	gi|289596547|ref|YP_003483243.1|	-	6.9e-05	22.7	0.1	0.00014	21.7	0.1	1.5	1	0	0	1	1	1	1	MarR	family
Sigma70_r4_2	PF08281.12	gi|289596547|ref|YP_003483243.1|	-	6.9e-05	22.4	0.2	0.00015	21.3	0.0	1.7	2	0	0	2	2	1	1	Sigma-70,	region	4
HTH_20	PF12840.7	gi|289596547|ref|YP_003483243.1|	-	7e-05	22.8	0.0	0.00011	22.2	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.6	gi|289596547|ref|YP_003483243.1|	-	9.6e-05	22.1	0.1	0.00018	21.2	0.1	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_38	PF13936.6	gi|289596547|ref|YP_003483243.1|	-	0.00023	20.9	0.3	0.00055	19.6	0.3	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
Sigma70_r4	PF04545.16	gi|289596547|ref|YP_003483243.1|	-	0.00024	20.5	0.1	0.00041	19.8	0.1	1.4	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_28	PF13518.6	gi|289596547|ref|YP_003483243.1|	-	0.00089	19.3	0.1	0.0013	18.8	0.1	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_36	PF13730.6	gi|289596547|ref|YP_003483243.1|	-	0.00099	19.0	0.0	0.0076	16.2	0.0	2.1	2	0	0	2	2	2	1	Helix-turn-helix	domain
FaeA	PF04703.12	gi|289596547|ref|YP_003483243.1|	-	0.0011	19.2	0.2	0.0026	18.1	0.2	1.6	1	0	0	1	1	1	1	FaeA-like	protein
GntR	PF00392.21	gi|289596547|ref|YP_003483243.1|	-	0.0015	18.1	0.1	0.003	17.2	0.1	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
TFIIE_alpha	PF02002.17	gi|289596547|ref|YP_003483243.1|	-	0.0021	17.9	0.7	0.0077	16.1	0.2	1.9	1	1	0	2	2	2	1	TFIIE	alpha	subunit
HTH_5	PF01022.20	gi|289596547|ref|YP_003483243.1|	-	0.004	17.0	0.0	0.0067	16.3	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_IclR	PF09339.10	gi|289596547|ref|YP_003483243.1|	-	0.0044	16.8	0.0	0.0074	16.1	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
MarR_2	PF12802.7	gi|289596547|ref|YP_003483243.1|	-	0.0065	16.3	0.0	0.011	15.6	0.0	1.3	1	0	0	1	1	1	1	MarR	family
Fe_dep_repress	PF01325.19	gi|289596547|ref|YP_003483243.1|	-	0.0082	16.3	0.1	0.031	14.5	0.0	2.0	2	1	1	3	3	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_Tnp_ISL3	PF13542.6	gi|289596547|ref|YP_003483243.1|	-	0.0083	15.5	0.0	0.014	14.8	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain	of	transposase	family	ISL3
Rrf2	PF02082.20	gi|289596547|ref|YP_003483243.1|	-	0.016	15.6	0.0	0.053	13.9	0.1	1.8	2	0	0	2	2	2	0	Transcriptional	regulator
HTH_27	PF13463.6	gi|289596547|ref|YP_003483243.1|	-	0.02	15.4	0.1	0.035	14.6	0.1	1.4	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
TrmB	PF01978.19	gi|289596547|ref|YP_003483243.1|	-	0.02	14.8	0.2	0.031	14.2	0.2	1.3	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_29	PF13551.6	gi|289596547|ref|YP_003483243.1|	-	0.022	14.8	0.0	0.034	14.1	0.0	1.3	1	0	0	1	1	1	0	Winged	helix-turn	helix
DUF977	PF06163.11	gi|289596547|ref|YP_003483243.1|	-	0.043	13.8	0.1	0.067	13.1	0.1	1.3	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF977)
HTH_17	PF12728.7	gi|289596547|ref|YP_003483243.1|	-	0.049	13.8	0.0	0.086	13.0	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_8	PF02954.19	gi|289596547|ref|YP_003483243.1|	-	0.056	13.2	0.0	0.15	11.9	0.0	1.7	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	Fis	family
HTH_40	PF14493.6	gi|289596547|ref|YP_003483243.1|	-	0.094	13.2	0.8	0.3	11.6	0.8	2.1	1	1	0	1	1	1	0	Helix-turn-helix	domain
Stk19	PF10494.9	gi|289596547|ref|YP_003483243.1|	-	0.1	12.3	0.0	0.1	12.2	0.0	1.2	1	0	0	1	1	1	0	Serine-threonine	protein	kinase	19
DUF4423	PF14394.6	gi|289596547|ref|YP_003483243.1|	-	0.11	12.2	0.0	0.14	11.9	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
HTH_10	PF04967.12	gi|289596547|ref|YP_003483243.1|	-	0.11	12.3	0.3	0.34	10.8	0.0	1.9	2	0	0	2	2	1	0	HTH	DNA	binding	domain
Gag_p30	PF02093.16	gi|289596547|ref|YP_003483243.1|	-	0.15	11.6	0.0	0.41	10.1	0.0	1.6	1	1	1	2	2	2	0	Gag	P30	core	shell	protein
Phage_terminase	PF10668.9	gi|289596547|ref|YP_003483243.1|	-	0.15	12.1	0.2	0.44	10.6	0.0	1.9	2	0	0	2	2	2	0	Phage	terminase	small	subunit
Flavin_Reduct	PF01613.18	gi|289596548|ref|YP_003483244.1|	-	6.4e-23	81.5	0.0	7.7e-23	81.3	0.0	1.0	1	0	0	1	1	1	1	Flavin	reductase	like	domain
Rubrerythrin	PF02915.17	gi|289596549|ref|YP_003483245.1|	-	6.4e-18	65.5	21.0	1.6e-14	54.4	10.5	2.0	1	1	1	2	2	2	2	Rubrerythrin
Ferritin	PF00210.24	gi|289596549|ref|YP_003483245.1|	-	0.00095	19.1	3.6	0.41	10.6	0.7	2.2	2	0	0	2	2	2	2	Ferritin-like	domain
Rubredoxin	PF00301.20	gi|289596550|ref|YP_003483246.1|	-	1.2e-25	89.3	3.0	1.3e-25	89.1	3.0	1.0	1	0	0	1	1	1	1	Rubredoxin
PHD_4	PF16866.5	gi|289596550|ref|YP_003483246.1|	-	0.0028	17.7	0.3	0.0039	17.2	0.3	1.3	1	1	0	1	1	1	1	PHD-finger
Vps36-NZF-N	PF16988.5	gi|289596550|ref|YP_003483246.1|	-	0.0038	16.6	1.3	0.085	12.3	0.0	2.1	2	0	0	2	2	2	1	Vacuolar	protein	sorting	36	NZF-N	zinc-finger	domain
zf-RanBP	PF00641.18	gi|289596550|ref|YP_003483246.1|	-	0.0045	16.3	2.7	0.063	12.6	0.2	2.1	2	0	0	2	2	2	1	Zn-finger	in	Ran	binding	protein	and	others
zf-Sec23_Sec24	PF04810.15	gi|289596550|ref|YP_003483246.1|	-	0.006	16.6	0.7	0.97	9.5	0.0	2.1	2	0	0	2	2	2	1	Sec23/Sec24	zinc	finger
zinc_ribbon_10	PF10058.9	gi|289596550|ref|YP_003483246.1|	-	0.015	15.0	2.0	3.1	7.6	0.0	2.1	2	0	0	2	2	2	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
zf-RRN7	PF11781.8	gi|289596550|ref|YP_003483246.1|	-	0.019	14.7	0.5	0.19	11.5	0.1	2.1	2	0	0	2	2	2	0	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
TF_Zn_Ribbon	PF08271.12	gi|289596550|ref|YP_003483246.1|	-	0.02	14.4	1.2	1.9	8.0	0.1	2.2	2	0	0	2	2	2	0	TFIIB	zinc-binding
Zn-ribbon_8	PF09723.10	gi|289596550|ref|YP_003483246.1|	-	0.033	14.3	0.9	0.23	11.6	0.9	2.0	1	1	0	1	1	1	0	Zinc	ribbon	domain
Zn_ribbon_SprT	PF17283.2	gi|289596550|ref|YP_003483246.1|	-	0.041	13.8	2.3	4.7	7.2	0.3	2.0	2	0	0	2	2	2	0	SprT-like	zinc	ribbon	domain
zf-MIZ	PF02891.20	gi|289596550|ref|YP_003483246.1|	-	0.057	13.2	3.1	0.57	10.0	0.2	2.1	2	0	0	2	2	2	0	MIZ/SP-RING	zinc	finger
Rubredoxin_2	PF18073.1	gi|289596550|ref|YP_003483246.1|	-	0.11	12.3	4.7	2.2	8.1	0.5	2.2	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
OrfB_Zn_ribbon	PF07282.11	gi|289596550|ref|YP_003483246.1|	-	0.19	11.7	0.9	2.5	8.1	0.9	2.0	1	1	0	1	1	1	0	Putative	transposase	DNA-binding	domain
ADK_lid	PF05191.14	gi|289596550|ref|YP_003483246.1|	-	0.21	11.6	3.3	1.7	8.7	3.3	2.0	1	1	0	1	1	1	0	Adenylate	kinase,	active	site	lid
RbpA	PF13397.6	gi|289596550|ref|YP_003483246.1|	-	0.3	11.7	0.8	0.95	10.1	0.1	1.9	1	1	1	2	2	2	0	RNA	polymerase-binding	protein
Zn-C2H2_12	PF18112.1	gi|289596550|ref|YP_003483246.1|	-	2.5	8.6	6.7	27	5.3	2.5	2.9	3	1	0	3	3	3	0	Autophagy	receptor	zinc	finger-C2H2	domain
Lactamase_B	PF00753.27	gi|289596551|ref|YP_003483247.1|	-	1.3e-10	41.7	0.0	2.5e-10	40.7	0.0	1.5	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|289596551|ref|YP_003483247.1|	-	0.0002	20.9	0.0	0.00033	20.2	0.0	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Flavodoxin_1	PF00258.25	gi|289596551|ref|YP_003483247.1|	-	0.0002	21.6	0.0	0.00081	19.6	0.0	2.0	2	0	0	2	2	2	1	Flavodoxin
Flavodoxin_5	PF12724.7	gi|289596551|ref|YP_003483247.1|	-	0.0014	18.8	0.2	0.0051	17.1	0.1	1.9	2	0	0	2	2	2	1	Flavodoxin	domain
Sm_like	PF16243.5	gi|289596551|ref|YP_003483247.1|	-	0.026	14.6	0.3	0.083	13.0	0.0	2.0	2	0	0	2	2	2	0	Sm_like	domain
AhpC-TSA	PF00578.21	gi|289596552|ref|YP_003483248.1|	-	3.7e-39	133.5	0.0	4.5e-39	133.2	0.0	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.10	gi|289596552|ref|YP_003483248.1|	-	7.3e-18	64.7	0.0	8.3e-18	64.5	0.0	1.0	1	0	0	1	1	1	1	Redoxin
Thioredoxin_8	PF13905.6	gi|289596552|ref|YP_003483248.1|	-	7.8e-05	22.9	0.0	0.00013	22.2	0.0	1.3	1	0	0	1	1	1	1	Thioredoxin-like
SCO1-SenC	PF02630.14	gi|289596552|ref|YP_003483248.1|	-	0.00042	20.2	0.0	0.00064	19.7	0.0	1.3	1	0	0	1	1	1	1	SCO1/SenC
AhpC-TSA_2	PF13911.6	gi|289596552|ref|YP_003483248.1|	-	0.003	17.6	0.0	0.016	15.4	0.0	1.8	1	1	0	1	1	1	1	AhpC/TSA	antioxidant	enzyme
DUF2540	PF10802.8	gi|289596552|ref|YP_003483248.1|	-	0.044	13.9	0.1	0.12	12.4	0.1	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2540)
Rubrerythrin	PF02915.17	gi|289596553|ref|YP_003483249.1|	-	2.3e-21	76.7	14.5	5.8e-20	72.1	14.5	2.1	1	1	0	1	1	1	1	Rubrerythrin
HypA	PF01155.19	gi|289596553|ref|YP_003483249.1|	-	0.024	14.6	0.2	0.05	13.6	0.2	1.6	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Cys_rich_CPCC	PF14206.6	gi|289596553|ref|YP_003483249.1|	-	0.025	14.4	1.7	0.058	13.2	1.7	1.6	1	0	0	1	1	1	0	Cysteine-rich	CPCC
A2L_zn_ribbon	PF08792.10	gi|289596553|ref|YP_003483249.1|	-	0.03	14.0	1.5	0.11	12.3	0.2	2.1	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
DZR	PF12773.7	gi|289596553|ref|YP_003483249.1|	-	0.033	14.2	0.4	0.051	13.6	0.4	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
zinc_ribbon_2	PF13240.6	gi|289596553|ref|YP_003483249.1|	-	0.065	13.0	3.7	0.39	10.5	3.7	2.1	1	1	2	3	3	3	0	zinc-ribbon	domain
Ferritin	PF00210.24	gi|289596553|ref|YP_003483249.1|	-	0.085	12.8	7.9	0.36	10.7	7.9	1.9	1	1	0	1	1	1	0	Ferritin-like	domain
TF_Zn_Ribbon	PF08271.12	gi|289596553|ref|YP_003483249.1|	-	0.088	12.3	2.1	7.4	6.2	0.1	2.4	2	0	0	2	2	2	0	TFIIB	zinc-binding
Zn-ribbon_8	PF09723.10	gi|289596553|ref|YP_003483249.1|	-	0.11	12.7	4.8	1.1	9.5	4.6	2.4	1	1	1	2	2	2	0	Zinc	ribbon	domain
zf-FPG_IleRS	PF06827.14	gi|289596553|ref|YP_003483249.1|	-	0.12	12.3	1.1	3.5	7.6	0.1	2.5	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
Prim_Zn_Ribbon	PF08273.12	gi|289596553|ref|YP_003483249.1|	-	0.13	12.6	1.3	8.2	6.8	0.4	2.3	2	0	0	2	2	2	0	Zinc-binding	domain	of	primase-helicase
Zn-C2H2_12	PF18112.1	gi|289596553|ref|YP_003483249.1|	-	0.21	12.1	5.3	2.3	8.8	0.4	2.7	2	0	0	2	2	2	0	Autophagy	receptor	zinc	finger-C2H2	domain
Rad50_zn_hook	PF04423.14	gi|289596553|ref|YP_003483249.1|	-	0.21	11.5	3.1	5.6	6.9	1.1	2.8	2	0	0	2	2	2	0	Rad50	zinc	hook	motif
DUF3039	PF11238.8	gi|289596553|ref|YP_003483249.1|	-	0.33	10.7	4.5	0.45	10.3	0.7	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3039)
Prok-RING_1	PF14446.6	gi|289596553|ref|YP_003483249.1|	-	0.34	10.9	4.3	1.4	8.9	4.2	2.0	1	1	1	2	2	2	0	Prokaryotic	RING	finger	family	1
Rubredoxin	PF00301.20	gi|289596553|ref|YP_003483249.1|	-	0.34	11.0	8.6	4	7.5	1.5	2.5	1	1	1	2	2	2	0	Rubredoxin
PhnA_Zn_Ribbon	PF08274.12	gi|289596553|ref|YP_003483249.1|	-	0.43	10.6	2.3	1.6	8.7	0.0	2.2	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
zf-RRN7	PF11781.8	gi|289596553|ref|YP_003483249.1|	-	0.75	9.5	3.1	3.9	7.3	0.2	2.3	2	0	0	2	2	2	0	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
zf-C2H2_3	PF13878.6	gi|289596553|ref|YP_003483249.1|	-	0.77	9.6	4.4	1.6	8.6	0.3	3.0	1	1	1	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
zf-ribbon_3	PF13248.6	gi|289596553|ref|YP_003483249.1|	-	0.78	9.2	5.9	1.9	8.0	0.7	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
Zn_ribbon_SprT	PF17283.2	gi|289596553|ref|YP_003483249.1|	-	1.3	9.0	5.2	0.58	10.1	0.3	2.2	2	0	0	2	2	2	0	SprT-like	zinc	ribbon	domain
DNA_ligase_ZBD	PF03119.16	gi|289596553|ref|YP_003483249.1|	-	2	8.5	9.1	7.8	6.6	2.4	2.5	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
ADK_lid	PF05191.14	gi|289596553|ref|YP_003483249.1|	-	3.4	7.7	5.5	4.3	7.4	4.1	1.9	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
Ferritin	PF00210.24	gi|289596554|ref|YP_003483250.1|	-	1.9e-44	151.0	6.0	2.3e-44	150.8	6.0	1.0	1	0	0	1	1	1	1	Ferritin-like	domain
PdaC	PF13739.6	gi|289596554|ref|YP_003483250.1|	-	4.1	8.4	6.4	1.7e+02	3.3	6.4	2.3	1	1	0	1	1	1	0	Deacetylase	PdaC
Desulfoferrodox	PF01880.18	gi|289596555|ref|YP_003483251.1|	-	4.6e-32	110.5	0.2	5.3e-32	110.3	0.2	1.0	1	0	0	1	1	1	1	Desulfoferrodoxin
SoxY	PF13501.6	gi|289596555|ref|YP_003483251.1|	-	0.0067	16.6	0.0	0.01	16.0	0.0	1.3	1	1	0	1	1	1	1	Sulfur	oxidation	protein	SoxY
GxDLY	PF14607.6	gi|289596555|ref|YP_003483251.1|	-	0.084	12.7	0.0	0.095	12.5	0.0	1.1	1	0	0	1	1	1	0	N-terminus	of	Esterase_SGNH_hydro-type
DUF308	PF03729.13	gi|289596556|ref|YP_003483252.1|	-	1.1e-17	64.1	64.2	3.5e-10	40.1	21.2	3.0	1	1	2	3	3	3	3	Short	repeat	of	unknown	function	(DUF308)
OsmC	PF02566.19	gi|289596557|ref|YP_003483253.1|	-	2.6e-15	56.7	0.0	4.5e-15	56.0	0.0	1.4	1	0	0	1	1	1	1	OsmC-like	protein
AhpC-TSA	PF00578.21	gi|289596558|ref|YP_003483254.1|	-	1e-32	112.6	0.0	1.4e-32	112.2	0.0	1.2	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.10	gi|289596558|ref|YP_003483254.1|	-	1.7e-15	57.0	0.0	2.4e-15	56.5	0.0	1.1	1	0	0	1	1	1	1	Redoxin
1-cysPrx_C	PF10417.9	gi|289596558|ref|YP_003483254.1|	-	1.2e-07	31.5	0.1	2.4e-07	30.5	0.1	1.5	1	0	0	1	1	1	1	C-terminal	domain	of	1-Cys	peroxiredoxin
Thioredoxin_8	PF13905.6	gi|289596558|ref|YP_003483254.1|	-	0.059	13.7	0.0	0.098	13.0	0.0	1.4	1	0	0	1	1	1	0	Thioredoxin-like
SCO1-SenC	PF02630.14	gi|289596558|ref|YP_003483254.1|	-	0.19	11.7	0.0	0.38	10.7	0.0	1.4	1	0	0	1	1	1	0	SCO1/SenC
Rubrerythrin	PF02915.17	gi|289596559|ref|YP_003483255.1|	-	2.2e-07	31.4	2.7	2.2e-07	31.4	2.7	1.4	2	0	0	2	2	2	1	Rubrerythrin
DUF2383	PF09537.10	gi|289596559|ref|YP_003483255.1|	-	0.0011	19.2	0.1	0.0023	18.3	0.1	1.5	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF2383)
Ferritin	PF00210.24	gi|289596559|ref|YP_003483255.1|	-	0.0043	17.0	0.5	0.0043	17.0	0.5	1.5	2	0	0	2	2	2	1	Ferritin-like	domain
COQ7	PF03232.13	gi|289596559|ref|YP_003483255.1|	-	0.0066	16.2	0.1	0.0081	15.9	0.1	1.3	1	0	0	1	1	1	1	Ubiquinone	biosynthesis	protein	COQ7
BSD	PF03909.17	gi|289596559|ref|YP_003483255.1|	-	0.28	11.2	2.2	6.9	6.8	0.4	2.3	2	0	0	2	2	2	0	BSD	domain
GDPD	PF03009.17	gi|289596560|ref|YP_003483256.1|	-	1.7e-29	103.3	0.0	2.5e-28	99.5	0.0	2.0	1	1	0	1	1	1	1	Glycerophosphoryl	diester	phosphodiesterase	family
PI-PLC-X	PF00388.19	gi|289596560|ref|YP_003483256.1|	-	0.021	14.4	0.0	0.033	13.8	0.0	1.3	1	0	0	1	1	1	0	Phosphatidylinositol-specific	phospholipase	C,	X	domain
QRPTase_C	PF01729.19	gi|289596560|ref|YP_003483256.1|	-	0.078	12.8	0.1	10	5.8	0.0	2.2	1	1	1	2	2	2	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
Foamy_virus_ENV	PF03408.14	gi|289596560|ref|YP_003483256.1|	-	0.16	9.8	0.1	0.22	9.3	0.1	1.1	1	0	0	1	1	1	0	Foamy	virus	envelope	protein
DUF308	PF03729.13	gi|289596561|ref|YP_003483257.1|	-	1.4e-07	31.7	48.7	3.6e-06	27.2	16.1	3.1	1	1	2	3	3	3	3	Short	repeat	of	unknown	function	(DUF308)
PEPCK_GTP	PF00821.18	gi|289596562|ref|YP_003483258.1|	-	1.2e-107	359.9	0.0	1.6e-107	359.5	0.0	1.2	1	0	0	1	1	1	1	Phosphoenolpyruvate	carboxykinase	C-terminal	P-loop	domain
PEPCK_N	PF17297.2	gi|289596562|ref|YP_003483258.1|	-	3.7e-55	186.9	0.0	5.3e-55	186.4	0.0	1.2	1	0	0	1	1	1	1	Phosphoenolpyruvate	carboxykinase	N-terminal	domain
PEPCK_ATP	PF01293.20	gi|289596562|ref|YP_003483258.1|	-	9.7e-07	27.8	0.0	1.4e-06	27.2	0.0	1.1	1	0	0	1	1	1	1	Phosphoenolpyruvate	carboxykinase
Nitro_FeMo-Co	PF02579.17	gi|289596563|ref|YP_003483259.1|	-	4.8e-09	36.4	0.1	9.2e-09	35.5	0.0	1.4	2	0	0	2	2	2	1	Dinitrogenase	iron-molybdenum	cofactor
DUF2284	PF10050.9	gi|289596564|ref|YP_003483260.1|	-	1.8e-30	105.8	0.3	2.3e-30	105.5	0.3	1.1	1	0	0	1	1	1	1	Predicted	metal-binding	protein	(DUF2284)
DUF998	PF06197.13	gi|289596565|ref|YP_003483261.1|	-	1.3e-20	73.8	16.7	1.6e-20	73.5	16.7	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF998)
DUF1610	PF07754.11	gi|289596566|ref|YP_003483262.1|	-	1.2e-09	37.9	11.7	3.5e-07	30.1	5.3	2.5	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF1610)
zinc_ribbon_2	PF13240.6	gi|289596566|ref|YP_003483262.1|	-	1.1e-06	28.1	16.4	3.4e-06	26.6	1.5	3.1	3	0	0	3	3	3	2	zinc-ribbon	domain
DZR	PF12773.7	gi|289596566|ref|YP_003483262.1|	-	4.8e-05	23.3	11.0	0.0034	17.4	11.3	2.1	1	1	0	1	1	1	1	Double	zinc	ribbon
zf-RING_7	PF02591.15	gi|289596566|ref|YP_003483262.1|	-	0.0011	19.1	15.2	0.029	14.5	0.1	3.6	2	1	1	3	3	3	2	C4-type	zinc	ribbon	domain
zf-ribbon_3	PF13248.6	gi|289596566|ref|YP_003483262.1|	-	0.0013	18.1	18.4	0.87	9.1	1.0	3.9	3	1	1	4	4	4	2	zinc-ribbon	domain
DUF1272	PF06906.11	gi|289596566|ref|YP_003483262.1|	-	0.0022	18.1	12.4	0.031	14.4	2.0	2.3	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF1272)
C1_2	PF03107.16	gi|289596566|ref|YP_003483262.1|	-	0.0077	16.5	10.2	0.27	11.6	2.9	2.1	1	1	1	2	2	2	2	C1	domain
Rhodanese_C	PF12368.8	gi|289596566|ref|YP_003483262.1|	-	0.01	16.2	7.0	0.012	15.9	7.0	1.1	1	0	0	1	1	1	0	Rhodanase	C-terminal
Dynactin_p62	PF05502.13	gi|289596566|ref|YP_003483262.1|	-	0.013	14.4	7.7	0.16	10.7	2.6	2.0	1	1	1	2	2	2	0	Dynactin	p62	family
zf-CHY	PF05495.12	gi|289596566|ref|YP_003483262.1|	-	0.033	14.7	7.9	3.1	8.3	0.2	2.0	1	1	1	2	2	2	0	CHY	zinc	finger
OrfB_Zn_ribbon	PF07282.11	gi|289596566|ref|YP_003483262.1|	-	0.048	13.6	10.6	0.11	12.4	1.0	2.2	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
Sgf11	PF08209.11	gi|289596566|ref|YP_003483262.1|	-	0.056	13.0	13.1	0.87	9.2	3.8	3.5	3	1	0	3	3	3	0	Sgf11	(transcriptional	regulation	protein)
HypA	PF01155.19	gi|289596566|ref|YP_003483262.1|	-	0.058	13.4	10.5	0.26	11.3	0.6	2.0	1	1	1	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zinc-ribbons_6	PF07191.12	gi|289596566|ref|YP_003483262.1|	-	0.062	13.3	9.3	0.22	11.5	9.3	1.8	1	1	0	1	1	1	0	zinc-ribbons
HalOD2	PF18547.1	gi|289596566|ref|YP_003483262.1|	-	0.063	13.2	10.8	5.5	7.0	0.1	3.4	2	1	1	3	3	3	0	Halobacterial	output	domain	2
Zn_Tnp_IS91	PF14319.6	gi|289596566|ref|YP_003483262.1|	-	0.069	13.2	8.9	0.11	12.5	8.9	1.4	1	1	0	1	1	1	0	Transposase	zinc-binding	domain
zf-MYND	PF01753.18	gi|289596566|ref|YP_003483262.1|	-	0.076	13.1	6.2	0.6	10.2	0.7	2.2	1	1	1	2	2	2	0	MYND	finger
zf-UBR	PF02207.20	gi|289596566|ref|YP_003483262.1|	-	0.076	13.2	6.4	0.34	11.1	5.1	2.2	1	1	0	1	1	1	0	Putative	zinc	finger	in	N-recognin	(UBR	box)
tRNA-synt_1g	PF09334.11	gi|289596566|ref|YP_003483262.1|	-	0.095	11.4	2.8	0.11	11.2	2.8	1.2	1	1	0	1	1	1	0	tRNA	synthetases	class	I	(M)
zf-LITAF-like	PF10601.9	gi|289596566|ref|YP_003483262.1|	-	0.13	12.5	12.6	0.24	11.7	0.6	3.3	1	1	2	3	3	3	0	LITAF-like	zinc	ribbon	domain
NRDD	PF13597.6	gi|289596566|ref|YP_003483262.1|	-	0.13	11.0	11.8	0.27	10.0	1.0	2.0	1	1	1	2	2	2	0	Anaerobic	ribonucleoside-triphosphate	reductase
Prok-RING_1	PF14446.6	gi|289596566|ref|YP_003483262.1|	-	0.15	12.0	11.9	0.059	13.3	5.0	2.5	1	1	1	2	2	2	0	Prokaryotic	RING	finger	family	1
Rubredoxin_2	PF18073.1	gi|289596566|ref|YP_003483262.1|	-	0.15	11.8	18.0	0.82	9.5	0.3	3.9	3	1	0	3	3	3	0	Rubredoxin	metal	binding	domain
TackOD1	PF18551.1	gi|289596566|ref|YP_003483262.1|	-	0.17	11.6	0.4	0.17	11.6	0.4	2.0	1	1	1	2	2	2	0	Thaumarchaeal	output	domain	1
zf-Mss51	PF13824.6	gi|289596566|ref|YP_003483262.1|	-	0.17	12.0	11.9	1.7	8.8	2.7	2.4	1	1	1	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
PolC_DP2	PF03833.13	gi|289596566|ref|YP_003483262.1|	-	0.17	9.7	5.1	0.19	9.6	5.1	1.0	1	0	0	1	1	1	0	DNA	polymerase	II	large	subunit	DP2
zinc_ribbon_10	PF10058.9	gi|289596566|ref|YP_003483262.1|	-	0.23	11.2	13.5	1.5	8.6	1.8	3.3	2	2	1	3	3	3	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
zf-AN1	PF01428.16	gi|289596566|ref|YP_003483262.1|	-	0.3	11.3	12.1	2.7	8.2	3.2	2.7	1	1	2	3	3	3	0	AN1-like	Zinc	finger
zf-B_box	PF00643.24	gi|289596566|ref|YP_003483262.1|	-	1.2	9.4	10.0	13	6.0	2.4	2.9	2	1	1	3	3	3	0	B-box	zinc	finger
Zn-ribbon_8	PF09723.10	gi|289596566|ref|YP_003483262.1|	-	1.2	9.3	17.2	1.6	8.9	2.9	3.4	1	1	2	3	3	3	0	Zinc	ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|289596566|ref|YP_003483262.1|	-	1.8	8.1	19.8	1.5	8.4	1.1	3.5	2	1	1	3	3	3	0	TFIIB	zinc-binding
RNA_POL_M_15KD	PF02150.16	gi|289596566|ref|YP_003483262.1|	-	2.1	8.3	13.8	3.6	7.6	2.8	3.2	1	1	1	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
A2L_zn_ribbon	PF08792.10	gi|289596566|ref|YP_003483262.1|	-	2.2	8.1	12.6	23	4.9	0.2	3.6	3	1	0	3	3	3	0	A2L	zinc	ribbon	domain
zf-ACC	PF17848.1	gi|289596566|ref|YP_003483262.1|	-	2.3	8.4	16.2	2.7	8.2	0.1	4.0	3	1	1	4	4	4	0	Acetyl-coA	carboxylase	zinc	finger	domain
TFIIS_C	PF01096.18	gi|289596566|ref|YP_003483262.1|	-	2.5	8.0	16.2	3	7.8	0.1	4.0	1	1	4	5	5	5	0	Transcription	factor	S-II	(TFIIS)
Nudix_N_2	PF14803.6	gi|289596566|ref|YP_003483262.1|	-	2.9	7.9	16.2	3.8	7.5	0.2	3.6	2	1	0	2	2	2	0	Nudix	N-terminal
DUF2072	PF09845.9	gi|289596566|ref|YP_003483262.1|	-	3.5	7.9	11.0	0.52	10.6	1.9	2.1	1	1	1	2	2	2	0	Zn-ribbon	containing	protein
zf-HIT	PF04438.16	gi|289596566|ref|YP_003483262.1|	-	4.8	7.2	18.6	4.9	7.1	7.5	3.2	2	2	0	2	2	2	0	HIT	zinc	finger
Nop10p	PF04135.12	gi|289596566|ref|YP_003483262.1|	-	7.7	6.6	9.3	0.77	9.8	1.2	2.4	1	1	1	2	2	2	0	Nucleolar	RNA-binding	protein,	Nop10p	family
zf-H2C2_2	PF13465.6	gi|289596566|ref|YP_003483262.1|	-	8.7	7.0	12.5	5.1	7.7	2.8	3.0	3	1	0	3	3	3	0	Zinc-finger	double	domain
PhnA_Zn_Ribbon	PF08274.12	gi|289596566|ref|YP_003483262.1|	-	9.5	6.3	11.2	7.9	6.5	0.2	3.0	2	1	1	3	3	3	0	PhnA	Zinc-Ribbon
EF1_GNE	PF00736.19	gi|289596567|ref|YP_003483263.1|	-	4e-18	65.4	4.7	4.4e-18	65.3	4.7	1.0	1	0	0	1	1	1	1	EF-1	guanine	nucleotide	exchange	domain
PQQ_3	PF13570.6	gi|289596568|ref|YP_003483264.1|	-	8.1e-35	118.4	17.0	1.2e-05	25.6	0.0	8.5	8	0	0	8	8	8	7	PQQ-like	domain
PQQ_2	PF13360.6	gi|289596568|ref|YP_003483264.1|	-	2.7e-25	89.3	0.0	6.8e-10	38.9	0.0	3.5	1	1	2	3	3	3	3	PQQ-like	domain
PQQ	PF01011.21	gi|289596568|ref|YP_003483264.1|	-	4.1e-07	29.6	25.8	0.18	11.8	0.2	8.8	8	1	0	8	8	8	5	PQQ	enzyme	repeat
DUF4430	PF14478.6	gi|289596568|ref|YP_003483264.1|	-	0.0016	19.0	3.8	0.0016	19.0	3.8	2.3	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4430)
NTPase_I-T	PF01931.18	gi|289596569|ref|YP_003483265.1|	-	2.8e-52	176.8	0.0	3.9e-52	176.3	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF84
CTP_transf_like	PF01467.26	gi|289596569|ref|YP_003483265.1|	-	8.6e-15	55.2	0.0	1.4e-14	54.5	0.0	1.3	1	0	0	1	1	1	1	Cytidylyltransferase-like
ATP-sulfurylase	PF01747.17	gi|289596569|ref|YP_003483265.1|	-	0.0046	16.5	0.0	0.0065	16.0	0.0	1.3	1	0	0	1	1	1	1	ATP-sulfurylase
Pantoate_ligase	PF02569.15	gi|289596569|ref|YP_003483265.1|	-	0.032	13.4	0.0	0.5	9.5	0.0	2.2	1	1	0	2	2	2	0	Pantoate-beta-alanine	ligase
Glyco_transf_11	PF01531.16	gi|289596569|ref|YP_003483265.1|	-	0.062	12.5	0.0	0.093	11.9	0.0	1.3	1	0	0	1	1	1	0	Glycosyl	transferase	family	11
FAD_syn	PF06574.12	gi|289596569|ref|YP_003483265.1|	-	0.11	12.3	0.0	0.18	11.7	0.0	1.5	1	0	0	1	1	1	0	FAD	synthetase
DUF2116	PF09889.9	gi|289596570|ref|YP_003483266.1|	-	2e-18	66.1	0.2	2.5e-18	65.8	0.2	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
DZR	PF12773.7	gi|289596570|ref|YP_003483266.1|	-	0.0086	16.1	0.2	0.01	15.9	0.2	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_2	PF13240.6	gi|289596570|ref|YP_003483266.1|	-	0.019	14.7	0.9	0.032	13.9	0.9	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
Takusan	PF04822.13	gi|289596570|ref|YP_003483266.1|	-	0.05	13.5	0.6	0.05	13.5	0.6	1.5	2	0	0	2	2	2	0	Takusan
HlyD_2	PF12700.7	gi|289596570|ref|YP_003483266.1|	-	1.2	7.8	4.3	0.85	8.3	1.4	1.8	2	0	0	2	2	2	0	HlyD	family	secretion	protein
NosD	PF05048.13	gi|289596571|ref|YP_003483267.1|	-	1.1e-34	119.8	64.8	8.3e-25	87.4	39.7	3.8	3	1	1	4	4	4	2	Periplasmic	copper-binding	protein	(NosD)
Beta_helix	PF13229.6	gi|289596571|ref|YP_003483267.1|	-	1.5e-27	96.4	75.9	5.6e-15	55.5	13.9	5.2	3	2	2	5	5	5	2	Right	handed	beta	helix	region
fn3	PF00041.21	gi|289596571|ref|YP_003483267.1|	-	9.7e-14	51.5	9.9	4.8e-05	23.6	0.2	4.8	3	2	0	3	3	3	3	Fibronectin	type	III	domain
Adeno_E1B_55K	PF01696.17	gi|289596571|ref|YP_003483267.1|	-	0.018	13.8	2.9	0.033	12.9	0.6	2.0	1	1	1	2	2	2	0	Adenovirus	EB1	55K	protein	/	large	t-antigen
ABC_tran	PF00005.27	gi|289596572|ref|YP_003483268.1|	-	5.7e-26	91.7	0.0	8e-26	91.2	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|289596572|ref|YP_003483268.1|	-	9.9e-10	38.7	0.1	0.00028	20.8	0.0	2.1	1	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|289596572|ref|YP_003483268.1|	-	1.7e-08	34.1	0.5	0.00062	19.3	0.1	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_27	PF13514.6	gi|289596572|ref|YP_003483268.1|	-	0.00023	20.8	0.0	0.00036	20.2	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_23	PF13476.6	gi|289596572|ref|YP_003483268.1|	-	0.00042	20.9	0.1	0.00072	20.1	0.1	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_29	PF13555.6	gi|289596572|ref|YP_003483268.1|	-	0.00043	20.0	0.0	0.00083	19.0	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
NACHT	PF05729.12	gi|289596572|ref|YP_003483268.1|	-	0.0061	16.5	0.4	0.027	14.4	0.1	2.0	2	1	0	2	2	2	1	NACHT	domain
AAA	PF00004.29	gi|289596572|ref|YP_003483268.1|	-	0.013	15.9	0.4	0.068	13.6	0.4	2.1	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_13	PF13166.6	gi|289596572|ref|YP_003483268.1|	-	0.026	13.2	0.0	0.04	12.6	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_16	PF13191.6	gi|289596572|ref|YP_003483268.1|	-	0.031	14.7	0.0	0.043	14.2	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_15	PF13175.6	gi|289596572|ref|YP_003483268.1|	-	0.036	13.8	0.3	0.13	11.9	0.1	1.8	2	0	0	2	2	2	0	AAA	ATPase	domain
T2SSE	PF00437.20	gi|289596572|ref|YP_003483268.1|	-	0.049	12.7	0.1	0.12	11.4	0.0	1.6	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
AAA_33	PF13671.6	gi|289596572|ref|YP_003483268.1|	-	0.052	13.7	0.3	0.2	11.8	0.1	2.0	1	1	1	2	2	2	0	AAA	domain
Mg_chelatase	PF01078.21	gi|289596572|ref|YP_003483268.1|	-	0.056	12.8	0.0	0.097	12.0	0.0	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
Thymidylate_kin	PF02223.17	gi|289596572|ref|YP_003483268.1|	-	0.058	13.1	0.0	0.12	12.1	0.0	1.5	1	0	0	1	1	1	0	Thymidylate	kinase
DUF3584	PF12128.8	gi|289596572|ref|YP_003483268.1|	-	0.059	10.9	0.1	0.077	10.5	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
AAA_19	PF13245.6	gi|289596572|ref|YP_003483268.1|	-	0.09	13.1	0.2	0.56	10.5	0.2	2.1	1	1	0	1	1	1	0	AAA	domain
AAA_30	PF13604.6	gi|289596572|ref|YP_003483268.1|	-	0.11	12.2	0.2	0.32	10.7	0.2	1.9	1	1	0	1	1	1	0	AAA	domain
MobB	PF03205.14	gi|289596572|ref|YP_003483268.1|	-	0.12	12.3	0.1	11	5.9	0.0	2.3	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_22	PF13401.6	gi|289596572|ref|YP_003483268.1|	-	0.13	12.6	0.2	0.46	10.8	0.2	1.9	1	1	0	1	1	1	0	AAA	domain
UPF0051	PF01458.17	gi|289596573|ref|YP_003483269.1|	-	6.2e-36	124.1	1.1	7.9e-36	123.8	1.1	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
DUF2782	PF11191.8	gi|289596573|ref|YP_003483269.1|	-	0.1	12.8	0.0	0.24	11.6	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2782)
zf-BED	PF02892.15	gi|289596574|ref|YP_003483270.1|	-	0.086	12.9	1.3	0.086	12.9	1.3	1.6	2	0	0	2	2	2	0	BED	zinc	finger
Fer4_13	PF13370.6	gi|289596575|ref|YP_003483271.1|	-	3.3e-22	78.8	5.1	3.8e-22	78.6	5.1	1.0	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_15	PF13459.6	gi|289596575|ref|YP_003483271.1|	-	1.3e-18	67.4	7.3	1.5e-18	67.3	7.3	1.0	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4	PF00037.27	gi|289596575|ref|YP_003483271.1|	-	5.9e-05	22.7	1.4	5.9e-05	22.7	1.4	2.5	3	0	0	3	3	3	1	4Fe-4S	binding	domain
Fer4_19	PF06902.11	gi|289596575|ref|YP_003483271.1|	-	8.3e-05	22.6	1.8	0.00011	22.2	1.8	1.2	1	0	0	1	1	1	1	Divergent	4Fe-4S	mono-cluster
Fer4_6	PF12837.7	gi|289596575|ref|YP_003483271.1|	-	0.00039	20.4	1.0	0.00039	20.4	1.0	2.4	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|289596575|ref|YP_003483271.1|	-	0.0013	18.7	3.4	0.0028	17.8	3.4	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|289596575|ref|YP_003483271.1|	-	0.0094	16.1	8.4	0.066	13.4	8.7	2.0	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
RexA	PF15969.5	gi|289596575|ref|YP_003483271.1|	-	0.012	15.2	0.0	0.013	15.1	0.0	1.0	1	0	0	1	1	1	0	Intracellular	sensor	of	Lambda	phage,	Abi	component
Fer4_2	PF12797.7	gi|289596575|ref|YP_003483271.1|	-	0.016	15.3	0.5	0.016	15.3	0.5	2.4	2	1	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|289596575|ref|YP_003483271.1|	-	0.016	15.7	3.9	0.15	12.7	0.2	2.3	1	1	0	2	2	2	0	4Fe-4S	dicluster	domain
adh_short	PF00106.25	gi|289596578|ref|YP_003483274.1|	-	1.6e-55	187.6	0.8	2e-55	187.3	0.8	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.6	gi|289596578|ref|YP_003483274.1|	-	1.1e-40	139.6	0.2	1.3e-40	139.4	0.2	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.10	gi|289596578|ref|YP_003483274.1|	-	4.5e-14	52.8	0.1	6.2e-14	52.3	0.1	1.1	1	0	0	1	1	1	1	KR	domain
HisG_C	PF08029.11	gi|289596578|ref|YP_003483274.1|	-	0.018	15.2	0.9	0.071	13.3	0.2	2.1	2	0	0	2	2	2	0	HisG,	C-terminal	domain
Epimerase	PF01370.21	gi|289596578|ref|YP_003483274.1|	-	0.022	14.2	0.8	0.13	11.7	0.8	2.0	1	1	0	1	1	1	0	NAD	dependent	epimerase/dehydratase	family
HEM4	PF02602.15	gi|289596578|ref|YP_003483274.1|	-	0.024	14.0	0.0	0.033	13.5	0.0	1.2	1	0	0	1	1	1	0	Uroporphyrinogen-III	synthase	HemD
Mur_ligase_C	PF02875.21	gi|289596578|ref|YP_003483274.1|	-	0.027	14.7	0.1	0.062	13.6	0.1	1.5	1	0	0	1	1	1	0	Mur	ligase	family,	glutamate	ligase	domain
Ribosomal_S11	PF00411.19	gi|289596578|ref|YP_003483274.1|	-	0.041	14.3	0.5	0.17	12.3	0.0	2.1	2	1	0	2	2	2	0	Ribosomal	protein	S11
DUF190	PF02641.15	gi|289596578|ref|YP_003483274.1|	-	0.046	14.1	0.0	0.1	12.9	0.0	1.6	1	0	0	1	1	1	0	Uncharacterized	ACR,	COG1993
Methyltr_RsmB-F	PF01189.17	gi|289596578|ref|YP_003483274.1|	-	0.13	11.8	0.0	0.22	11.1	0.0	1.4	1	0	0	1	1	1	0	16S	rRNA	methyltransferase	RsmB/F
HHH_5	PF14520.6	gi|289596578|ref|YP_003483274.1|	-	1.4	9.6	3.7	39	5.0	0.2	3.0	4	1	0	4	4	4	0	Helix-hairpin-helix	domain
Amidohydro_1	PF01979.20	gi|289596579|ref|YP_003483275.1|	-	9.4e-15	54.8	0.0	5.4e-14	52.3	0.0	2.0	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.11	gi|289596579|ref|YP_003483275.1|	-	4.9e-13	49.4	0.0	3.7e-08	33.3	0.0	2.9	3	0	0	3	3	3	2	Amidohydrolase	family
NUDIX	PF00293.28	gi|289596580|ref|YP_003483276.1|	-	1.3e-19	70.5	0.1	1.5e-19	70.3	0.1	1.0	1	0	0	1	1	1	1	NUDIX	domain
Lactamase_B	PF00753.27	gi|289596581|ref|YP_003483277.1|	-	1.1e-08	35.3	1.4	1.7e-08	34.8	1.3	1.4	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|289596581|ref|YP_003483277.1|	-	1.3e-06	28.1	0.0	2.4e-06	27.2	0.0	1.4	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
HHH_3	PF12836.7	gi|289596582|ref|YP_003483278.1|	-	2e-10	40.7	0.1	3.7e-10	39.9	0.1	1.3	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH	PF00633.23	gi|289596582|ref|YP_003483278.1|	-	0.00058	19.6	0.1	0.19	11.7	0.0	2.4	2	0	0	2	2	2	2	Helix-hairpin-helix	motif
HHH_5	PF14520.6	gi|289596582|ref|YP_003483278.1|	-	0.0042	17.6	0.4	0.04	14.5	0.4	2.2	1	1	0	1	1	1	1	Helix-hairpin-helix	domain
PsbU	PF06514.11	gi|289596582|ref|YP_003483278.1|	-	0.0048	16.8	0.0	0.0099	15.8	0.0	1.5	1	0	0	1	1	1	1	Photosystem	II	12	kDa	extrinsic	protein	(PsbU)
HIGH_NTase1_ass	PF16581.5	gi|289596582|ref|YP_003483278.1|	-	0.0093	16.0	0.6	0.015	15.3	0.1	1.6	2	1	0	2	2	2	1	Cytidyltransferase-related	C-terminal	region
NUDIX	PF00293.28	gi|289596582|ref|YP_003483278.1|	-	0.084	12.9	0.2	0.16	12.0	0.2	1.6	1	1	0	1	1	1	0	NUDIX	domain
PTS_2-RNA	PF01885.16	gi|289596583|ref|YP_003483279.1|	-	5.6e-27	94.9	0.0	8.1e-27	94.4	0.0	1.2	1	0	0	1	1	1	1	RNA	2'-phosphotransferase,	Tpt1	/	KptA	family
RE_SinI	PF09570.10	gi|289596583|ref|YP_003483279.1|	-	0.015	14.5	0.2	0.027	13.7	0.2	1.3	1	0	0	1	1	1	0	SinI	restriction	endonuclease
MetallophosN	PF16371.5	gi|289596583|ref|YP_003483279.1|	-	0.088	13.1	0.0	0.35	11.2	0.0	1.9	2	0	0	2	2	2	0	N	terminal	of	Calcineurin-like	phosphoesterase
Csd3_N	PF18059.1	gi|289596583|ref|YP_003483279.1|	-	0.099	13.2	1.4	0.55	10.8	0.1	2.5	3	0	0	3	3	3	0	Csd3	N-terminal
FeS_assembly_P	PF01883.19	gi|289596584|ref|YP_003483280.1|	-	1.2e-21	76.7	0.2	1.4e-21	76.4	0.2	1.1	1	0	0	1	1	1	1	Iron-sulfur	cluster	assembly	protein
HisKA_7TM	PF16927.5	gi|289596585|ref|YP_003483281.1|	-	2.1e-06	27.9	33.2	2.4e-06	27.7	33.2	1.0	1	0	0	1	1	1	1	N-terminal	7TM	region	of	histidine	kinase
7TMR-DISM_7TM	PF07695.11	gi|289596585|ref|YP_003483281.1|	-	0.58	10.0	45.2	1.1	9.1	45.2	1.5	1	1	0	1	1	1	0	7TM	diverse	intracellular	signalling
GATase_5	PF13507.6	gi|289596586|ref|YP_003483282.1|	-	1.2e-70	237.6	0.0	1.4e-70	237.4	0.0	1.0	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
DJ-1_PfpI	PF01965.24	gi|289596586|ref|YP_003483282.1|	-	3.6e-06	26.9	0.0	9.8e-06	25.5	0.0	1.5	1	1	0	1	1	1	1	DJ-1/PfpI	family
GATase_3	PF07685.14	gi|289596586|ref|YP_003483282.1|	-	8.5e-06	25.5	0.0	1.6e-05	24.6	0.0	1.4	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
GATase	PF00117.28	gi|289596586|ref|YP_003483282.1|	-	0.00036	20.3	0.0	0.00065	19.5	0.0	1.7	1	1	0	1	1	1	1	Glutamine	amidotransferase	class-I
ThiJ_like	PF17124.5	gi|289596586|ref|YP_003483282.1|	-	0.0059	16.3	0.0	0.0087	15.8	0.0	1.3	1	0	0	1	1	1	1	ThiJ/PfpI	family-like
MSV199	PF10553.9	gi|289596586|ref|YP_003483282.1|	-	0.011	16.0	0.3	0.055	13.7	0.0	1.9	2	0	0	2	2	2	0	MSV199	domain
SNO	PF01174.19	gi|289596586|ref|YP_003483282.1|	-	0.05	13.5	0.0	0.22	11.4	0.0	1.9	2	0	0	2	2	2	0	SNO	glutamine	amidotransferase	family
AIRS_C	PF02769.22	gi|289596587|ref|YP_003483283.1|	-	5.4e-48	163.1	4.5	5.8e-31	107.7	0.6	2.2	2	0	0	2	2	2	2	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.24	gi|289596587|ref|YP_003483283.1|	-	1.5e-40	137.7	0.1	1.5e-20	73.6	0.0	2.6	2	0	0	2	2	2	2	AIR	synthase	related	protein,	N-terminal	domain
FGAR-AT_linker	PF18072.1	gi|289596587|ref|YP_003483283.1|	-	3.4e-21	75.5	1.0	2.9e-20	72.6	0.1	2.6	2	0	0	2	2	2	1	Formylglycinamide	ribonucleotide	amidotransferase	linker	domain
PurS	PF02700.14	gi|289596588|ref|YP_003483284.1|	-	5.1e-25	87.4	0.6	5.7e-25	87.3	0.6	1.0	1	0	0	1	1	1	1	Phosphoribosylformylglycinamidine	(FGAM)	synthase
Pribosyltran	PF00156.27	gi|289596588|ref|YP_003483284.1|	-	0.086	12.3	0.0	0.091	12.3	0.0	1.1	1	0	0	1	1	1	0	Phosphoribosyl	transferase	domain
4HB_MCP_1	PF12729.7	gi|289596589|ref|YP_003483285.1|	-	0.014	15.0	0.1	0.016	14.7	0.1	1.0	1	0	0	1	1	1	0	Four	helix	bundle	sensory	module	for	signal	transduction
DUF2606	PF10794.9	gi|289596589|ref|YP_003483285.1|	-	0.14	12.0	0.5	0.2	11.5	0.5	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2606)
EMG1	PF03587.14	gi|289596590|ref|YP_003483286.1|	-	1.1e-49	168.7	0.0	1.3e-49	168.5	0.0	1.0	1	0	0	1	1	1	1	EMG1/NEP1	methyltransferase
Methyltrn_RNA_2	PF04013.12	gi|289596590|ref|YP_003483286.1|	-	0.084	12.6	0.0	0.11	12.1	0.0	1.2	1	0	0	1	1	1	0	Putative	SAM-dependent	RNA	methyltransferase
Ribonuc_red_lgC	PF02867.15	gi|289596591|ref|YP_003483287.1|	-	3.8e-168	560.3	0.0	1.3e-166	555.2	0.0	2.2	1	1	0	1	1	1	1	Ribonucleotide	reductase,	barrel	domain
Ribonuc_red_lgN	PF00317.21	gi|289596591|ref|YP_003483287.1|	-	2.8e-27	94.5	0.6	7.9e-27	93.1	0.1	2.1	2	0	0	2	2	2	1	Ribonucleotide	reductase,	all-alpha	domain
ATP-cone	PF03477.16	gi|289596591|ref|YP_003483287.1|	-	1.5e-17	64.0	4.7	1.5e-17	64.0	4.7	2.4	2	0	0	2	2	2	1	ATP	cone	domain
NRDD	PF13597.6	gi|289596591|ref|YP_003483287.1|	-	0.0042	15.9	0.3	0.093	11.5	0.0	2.2	2	0	0	2	2	2	1	Anaerobic	ribonucleoside-triphosphate	reductase
RGS	PF00615.19	gi|289596591|ref|YP_003483287.1|	-	0.52	10.6	2.3	1.2	9.4	0.3	2.5	3	0	0	3	3	3	0	Regulator	of	G	protein	signaling	domain
Pfg27	PF09216.10	gi|289596591|ref|YP_003483287.1|	-	2.3	8.0	11.4	0.73	9.6	7.2	2.1	2	0	0	2	2	2	0	Pfg27
SRP54	PF00448.22	gi|289596592|ref|YP_003483288.1|	-	2e-72	243.0	0.3	3.4e-72	242.2	0.3	1.4	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SRP_SPB	PF02978.19	gi|289596592|ref|YP_003483288.1|	-	1.2e-26	93.2	1.9	1.2e-26	93.2	1.9	3.0	3	1	0	3	3	3	1	Signal	peptide	binding	domain
SRP54_N	PF02881.19	gi|289596592|ref|YP_003483288.1|	-	9.7e-17	61.0	3.5	1e-15	57.7	0.3	3.7	3	0	0	3	3	3	1	SRP54-type	protein,	helical	bundle	domain
CbiA	PF01656.23	gi|289596592|ref|YP_003483288.1|	-	2.5e-08	34.0	0.0	1.1e-07	31.9	0.0	1.9	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_16	PF13191.6	gi|289596592|ref|YP_003483288.1|	-	0.0056	17.1	0.1	0.014	15.7	0.0	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
MeaB	PF03308.16	gi|289596592|ref|YP_003483288.1|	-	0.0083	15.1	0.2	0.024	13.6	0.0	1.8	2	0	0	2	2	2	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
MobB	PF03205.14	gi|289596592|ref|YP_003483288.1|	-	0.014	15.3	0.0	0.032	14.1	0.0	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA	PF00004.29	gi|289596592|ref|YP_003483288.1|	-	0.015	15.7	1.2	0.65	10.4	0.2	3.3	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
6PF2K	PF01591.18	gi|289596592|ref|YP_003483288.1|	-	0.016	14.5	0.0	0.035	13.4	0.0	1.6	1	0	0	1	1	1	0	6-phosphofructo-2-kinase
SRPRB	PF09439.10	gi|289596592|ref|YP_003483288.1|	-	0.02	14.3	0.2	0.33	10.3	0.1	2.5	2	0	0	2	2	2	0	Signal	recognition	particle	receptor	beta	subunit
PucR	PF07905.11	gi|289596592|ref|YP_003483288.1|	-	0.021	15.1	0.2	0.36	11.1	0.0	2.6	3	0	0	3	3	2	0	Purine	catabolism	regulatory	protein-like	family
APS_kinase	PF01583.20	gi|289596592|ref|YP_003483288.1|	-	0.027	14.4	0.0	0.076	12.9	0.0	1.8	1	0	0	1	1	1	0	Adenylylsulphate	kinase
ParA	PF10609.9	gi|289596592|ref|YP_003483288.1|	-	0.032	13.7	0.0	0.062	12.7	0.0	1.4	1	0	0	1	1	1	0	NUBPL	iron-transfer	P-loop	NTPase
ATP_bind_1	PF03029.17	gi|289596592|ref|YP_003483288.1|	-	0.037	13.8	0.2	1.2	8.8	0.0	2.6	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
AAA_28	PF13521.6	gi|289596592|ref|YP_003483288.1|	-	0.056	13.7	0.0	0.19	12.0	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
Spectrin	PF00435.21	gi|289596592|ref|YP_003483288.1|	-	0.064	13.8	0.9	0.52	10.8	0.0	2.7	2	0	0	2	2	2	0	Spectrin	repeat
AAA_22	PF13401.6	gi|289596592|ref|YP_003483288.1|	-	0.074	13.3	0.2	0.53	10.6	0.0	2.5	3	0	0	3	3	2	0	AAA	domain
AAA_30	PF13604.6	gi|289596592|ref|YP_003483288.1|	-	0.077	12.7	0.0	0.27	10.9	0.0	2.0	1	0	0	1	1	1	0	AAA	domain
Roc	PF08477.13	gi|289596592|ref|YP_003483288.1|	-	0.089	13.0	0.1	1.8	8.8	0.1	2.4	1	1	0	1	1	1	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
AAA_31	PF13614.6	gi|289596592|ref|YP_003483288.1|	-	0.1	12.5	0.0	0.35	10.8	0.0	1.9	2	0	0	2	2	1	0	AAA	domain
ResIII	PF04851.15	gi|289596592|ref|YP_003483288.1|	-	0.11	12.5	0.4	0.22	11.5	0.0	1.8	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
cobW	PF02492.19	gi|289596592|ref|YP_003483288.1|	-	0.13	11.9	0.7	0.41	10.2	0.7	1.8	1	1	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
Glyco_transf_4	PF13439.6	gi|289596592|ref|YP_003483288.1|	-	0.16	12.0	0.1	9.1	6.3	0.0	2.9	3	0	0	3	3	3	0	Glycosyltransferase	Family	4
LPD14	PF18827.1	gi|289596592|ref|YP_003483288.1|	-	0.35	11.1	2.8	9.1	6.6	0.3	3.2	3	0	0	3	3	3	0	Large	polyvalent	protein-associated	domain	14
DUF382	PF04037.13	gi|289596592|ref|YP_003483288.1|	-	0.74	10.0	5.6	6.8	6.9	0.0	2.8	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF382)
TrmB	PF01978.19	gi|289596592|ref|YP_003483288.1|	-	1.8	8.5	4.3	30	4.6	0.1	4.2	5	0	0	5	5	4	0	Sugar-specific	transcriptional	regulator	TrmB
Cytidylate_kin2	PF13189.6	gi|289596592|ref|YP_003483288.1|	-	2.6	8.2	5.7	24	5.0	0.6	3.0	3	0	0	3	3	2	0	Cytidylate	kinase-like	family
Methyltrn_RNA_2	PF04013.12	gi|289596593|ref|YP_003483289.1|	-	6.7e-50	169.6	0.0	7.6e-50	169.4	0.0	1.0	1	0	0	1	1	1	1	Putative	SAM-dependent	RNA	methyltransferase
Radical_SAM	PF04055.21	gi|289596594|ref|YP_003483290.1|	-	7.7e-08	32.9	0.1	5.9e-07	30.0	0.0	2.2	2	0	0	2	2	2	1	Radical	SAM	superfamily
BPD_transp_1	PF00528.22	gi|289596595|ref|YP_003483291.1|	-	3.3e-12	46.5	12.5	3.3e-12	46.5	12.5	1.9	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.22	gi|289596596|ref|YP_003483292.1|	-	4.5e-14	52.6	13.0	4.5e-14	52.6	13.0	2.9	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
EF-hand_1	PF00036.32	gi|289596596|ref|YP_003483292.1|	-	5e-05	22.6	0.3	0.00011	21.5	0.3	1.6	1	0	0	1	1	1	1	EF	hand
EF-hand_6	PF13405.6	gi|289596596|ref|YP_003483292.1|	-	0.00043	20.0	0.3	0.0012	18.7	0.3	1.7	1	0	0	1	1	1	1	EF-hand	domain
EF-hand_7	PF13499.6	gi|289596596|ref|YP_003483292.1|	-	0.013	15.9	0.1	0.027	14.9	0.1	1.4	1	0	0	1	1	1	0	EF-hand	domain	pair
EF-hand_5	PF13202.6	gi|289596596|ref|YP_003483292.1|	-	0.049	13.2	0.0	0.11	12.1	0.0	1.6	1	0	0	1	1	1	0	EF	hand
EF-hand_8	PF13833.6	gi|289596596|ref|YP_003483292.1|	-	0.16	11.8	0.2	0.3	11.0	0.2	1.4	1	0	0	1	1	1	0	EF-hand	domain	pair
Gate	PF07670.14	gi|289596596|ref|YP_003483292.1|	-	8.3	6.7	9.9	0.48	10.7	1.4	3.1	3	1	0	3	3	3	0	Nucleoside	recognition
DNA_pol_B	PF00136.21	gi|289596597|ref|YP_003483293.1|	-	7.6e-42	143.6	5.5	6.4e-41	140.5	5.5	2.2	1	1	0	1	1	1	1	DNA	polymerase	family	B
DNA_pol_B_exo1	PF03104.19	gi|289596597|ref|YP_003483293.1|	-	4.1e-06	26.2	0.3	1.2e-05	24.7	0.3	1.7	1	0	0	1	1	1	1	DNA	polymerase	family	B,	exonuclease	domain
DNA_pol_B_exo2	PF10108.9	gi|289596597|ref|YP_003483293.1|	-	0.00011	21.9	0.0	0.00026	20.7	0.0	1.5	1	0	0	1	1	1	1	Predicted	3'-5'	exonuclease	related	to	the	exonuclease	domain	of	PolB
DUF4065	PF13274.6	gi|289596597|ref|YP_003483293.1|	-	3.2	8.7	7.1	3.9	8.4	0.1	3.2	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF4065)
DUF5591	PF17884.1	gi|289596598|ref|YP_003483294.1|	-	1.1e-43	148.7	0.7	2.1e-43	147.8	0.3	1.7	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF5591)
PUA	PF01472.20	gi|289596598|ref|YP_003483294.1|	-	5.9e-09	35.8	0.0	1.1e-08	34.9	0.0	1.4	1	0	0	1	1	1	1	PUA	domain
TGT_C2	PF14810.6	gi|289596598|ref|YP_003483294.1|	-	4.3e-07	30.0	0.0	7.8e-07	29.1	0.0	1.4	1	0	0	1	1	1	1	Patch-forming	domain	C2	of	tRNA-guanine	transglycosylase
DUF4535	PF15054.6	gi|289596598|ref|YP_003483294.1|	-	0.02	14.6	0.0	0.079	12.7	0.0	2.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4535)
UPF0113	PF03657.13	gi|289596598|ref|YP_003483294.1|	-	0.062	13.6	0.0	0.18	12.1	0.0	1.7	1	0	0	1	1	1	0	UPF0113	PUA	domain
Prok-RING_1	PF14446.6	gi|289596599|ref|YP_003483295.1|	-	7e-14	51.5	4.3	1.2e-13	50.7	4.3	1.4	1	0	0	1	1	1	1	Prokaryotic	RING	finger	family	1
DUF5300	PF17224.3	gi|289596599|ref|YP_003483295.1|	-	0.0045	17.2	0.4	0.034	14.4	0.4	2.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF5300)
C1_1	PF00130.22	gi|289596599|ref|YP_003483295.1|	-	0.0056	16.5	4.6	0.01	15.7	4.6	1.4	1	0	0	1	1	1	1	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
ADK_lid	PF05191.14	gi|289596599|ref|YP_003483295.1|	-	0.0069	16.3	3.1	0.0069	16.3	3.1	2.0	2	0	0	2	2	2	1	Adenylate	kinase,	active	site	lid
zf-HC5HC2H	PF13771.6	gi|289596599|ref|YP_003483295.1|	-	0.01	16.1	3.1	0.04	14.2	3.1	2.0	1	0	0	1	1	1	0	PHD-like	zinc-binding	domain
PHD	PF00628.29	gi|289596599|ref|YP_003483295.1|	-	0.014	15.2	3.1	0.028	14.3	3.1	1.4	1	0	0	1	1	1	0	PHD-finger
TPR_2	PF07719.17	gi|289596599|ref|YP_003483295.1|	-	0.015	15.4	14.7	4.7	7.6	0.0	7.8	8	0	0	8	8	8	0	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|289596599|ref|YP_003483295.1|	-	0.029	15.0	0.5	86	3.9	0.0	4.9	4	0	0	4	4	4	0	Tetratricopeptide	repeat
TPR_8	PF13181.6	gi|289596599|ref|YP_003483295.1|	-	0.035	14.3	14.4	0.94	9.9	0.2	7.0	5	0	0	5	5	5	0	Tetratricopeptide	repeat
zf-HC5HC2H_2	PF13832.6	gi|289596599|ref|YP_003483295.1|	-	0.089	13.0	3.2	0.22	11.7	3.2	1.6	1	0	0	1	1	1	0	PHD-zinc-finger	like	domain
DUF5113	PF17140.4	gi|289596599|ref|YP_003483295.1|	-	0.14	12.0	6.0	1.6	8.5	0.5	4.3	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF5113)
zinc_ribbon_4	PF13717.6	gi|289596599|ref|YP_003483295.1|	-	0.4	10.6	6.7	3.6	7.6	1.8	2.8	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF1771	PF08590.10	gi|289596599|ref|YP_003483295.1|	-	0.45	10.9	0.0	0.45	10.9	0.0	4.4	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF1771)
Alkyl_sulf_dimr	PF14863.6	gi|289596599|ref|YP_003483295.1|	-	0.94	9.9	14.5	0.14	12.6	0.2	4.6	5	0	0	5	5	5	0	Alkyl	sulfatase	dimerisation
Zn_Tnp_IS91	PF14319.6	gi|289596599|ref|YP_003483295.1|	-	1.1	9.3	2.9	4.6	7.3	2.9	2.0	1	0	0	1	1	1	0	Transposase	zinc-binding	domain
TPR_1	PF00515.28	gi|289596599|ref|YP_003483295.1|	-	3.4	7.6	12.7	33	4.5	0.2	6.1	5	0	0	5	5	5	0	Tetratricopeptide	repeat
DUF4349	PF14257.6	gi|289596599|ref|YP_003483295.1|	-	5.5	6.4	9.4	5.5	6.4	0.0	4.7	4	1	1	5	5	5	0	Domain	of	unknown	function	(DUF4349)
BRCC36_C	PF18110.1	gi|289596599|ref|YP_003483295.1|	-	6.1	7.1	6.6	2.3	8.5	0.2	3.4	2	0	0	2	2	2	0	BRCC36	C-terminal	helical	domain
Tubulin	PF00091.25	gi|289596600|ref|YP_003483296.1|	-	6.4e-30	104.8	3.7	3.3e-29	102.5	3.7	2.0	1	1	0	1	1	1	1	Tubulin/FtsZ	family,	GTPase	domain
FtsZ_C	PF12327.8	gi|289596600|ref|YP_003483296.1|	-	1.1e-15	57.6	0.1	3e-15	56.3	0.1	1.7	1	0	0	1	1	1	1	FtsZ	family,	C-terminal	domain
AlaDh_PNT_C	PF01262.21	gi|289596600|ref|YP_003483296.1|	-	0.09	12.1	0.9	0.15	11.4	0.4	1.5	1	1	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
Tubulin_2	PF13809.6	gi|289596600|ref|YP_003483296.1|	-	4.5	6.3	8.8	3.3	6.8	0.3	2.2	1	1	0	2	2	2	0	Tubulin	like
RHH_1	PF01402.21	gi|289596601|ref|YP_003483297.1|	-	5.3e-11	42.1	1.7	1.6e-06	27.8	0.2	2.3	2	0	0	2	2	2	2	Ribbon-helix-helix	protein,	copG	family
RHH_8	PF17723.1	gi|289596601|ref|YP_003483297.1|	-	0.00013	22.2	0.1	0.43	10.8	0.0	2.1	2	0	0	2	2	2	2	Ribbon-Helix-Helix	transcriptional	regulator	family
DUF1378	PF07125.11	gi|289596601|ref|YP_003483297.1|	-	0.0087	16.2	0.5	8.1	6.7	0.2	2.9	2	1	1	3	3	3	2	Protein	of	unknown	function	(DUF1378)
VapB_antitoxin	PF09957.9	gi|289596601|ref|YP_003483297.1|	-	0.017	15.0	1.0	6.3	6.8	0.1	2.7	2	0	0	2	2	2	0	Bacterial	antitoxin	of	type	II	TA	system,	VapB
HTH_40	PF14493.6	gi|289596601|ref|YP_003483297.1|	-	0.033	14.6	0.4	0.14	12.6	0.2	1.9	1	1	1	2	2	2	0	Helix-turn-helix	domain
DndE	PF08870.11	gi|289596601|ref|YP_003483297.1|	-	0.045	14.0	0.1	0.058	13.7	0.1	1.2	1	1	0	1	1	1	0	DNA	sulphur	modification	protein	DndE
CHASE3	PF05227.13	gi|289596601|ref|YP_003483297.1|	-	0.074	13.0	1.4	0.33	10.8	0.1	2.0	1	1	1	2	2	2	0	CHASE3	domain
tRNA_bind	PF01588.20	gi|289596602|ref|YP_003483298.1|	-	1.7e-15	56.9	0.0	3.7e-15	55.8	0.0	1.6	1	0	0	1	1	1	1	Putative	tRNA	binding	domain
Alpha_Helical	PF18489.1	gi|289596602|ref|YP_003483298.1|	-	4.4e-14	52.8	0.3	7.2e-14	52.1	0.3	1.4	1	0	0	1	1	1	1	Alpha	helical	domain
TelA	PF05816.11	gi|289596602|ref|YP_003483298.1|	-	0.11	11.5	0.6	0.16	11.0	0.6	1.2	1	0	0	1	1	1	0	Toxic	anion	resistance	protein	(TelA)
DUF1743	PF08489.11	gi|289596603|ref|YP_003483299.1|	-	1.7e-37	128.0	0.0	2.8e-37	127.3	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1743)
tRNA_anti-codon	PF01336.25	gi|289596603|ref|YP_003483299.1|	-	1e-08	35.0	0.7	5.8e-08	32.6	0.3	2.4	2	1	1	3	3	3	1	OB-fold	nucleic	acid	binding	domain
tRNA_anti_2	PF13742.6	gi|289596603|ref|YP_003483299.1|	-	8.8e-05	22.6	0.0	0.0002	21.5	0.0	1.5	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
CDC24_OB3	PF17244.2	gi|289596603|ref|YP_003483299.1|	-	0.021	14.5	0.6	0.057	13.1	0.0	1.8	2	0	0	2	2	2	0	Cell	division	control	protein	24,	OB	domain	3
Zn_Tnp_IS1595	PF12760.7	gi|289596603|ref|YP_003483299.1|	-	0.034	14.1	3.0	0.069	13.1	3.0	1.5	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.11	gi|289596603|ref|YP_003483299.1|	-	0.036	14.0	0.9	0.1	12.6	0.9	1.7	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
RMI2	PF16100.5	gi|289596603|ref|YP_003483299.1|	-	0.098	12.5	0.0	0.18	11.6	0.0	1.4	1	0	0	1	1	1	0	RecQ-mediated	genome	instability	protein	2
Peptidase_U32_C	PF16325.5	gi|289596603|ref|YP_003483299.1|	-	0.1	12.9	0.0	0.35	11.2	0.0	2.0	1	0	0	1	1	1	0	Peptidase	family	U32	C-terminal	domain
zinc-ribbons_6	PF07191.12	gi|289596603|ref|YP_003483299.1|	-	0.14	12.2	0.3	0.26	11.3	0.3	1.4	1	0	0	1	1	1	0	zinc-ribbons
Zn_ribbon_SprT	PF17283.2	gi|289596603|ref|YP_003483299.1|	-	0.19	11.6	5.1	0.46	10.4	5.1	1.7	1	0	0	1	1	1	0	SprT-like	zinc	ribbon	domain
zf-RING_7	PF02591.15	gi|289596603|ref|YP_003483299.1|	-	0.22	11.8	1.4	1	9.6	0.3	2.4	2	0	0	2	2	2	0	C4-type	zinc	ribbon	domain
RNA_POL_M_15KD	PF02150.16	gi|289596603|ref|YP_003483299.1|	-	0.23	11.3	1.0	0.63	10.0	1.0	1.8	1	0	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
zf-TFIIB	PF13453.6	gi|289596603|ref|YP_003483299.1|	-	0.35	10.2	3.5	0.7	9.3	3.5	1.5	1	0	0	1	1	1	0	Transcription	factor	zinc-finger
HscB_4_cys	PF18256.1	gi|289596603|ref|YP_003483299.1|	-	0.36	10.7	5.1	0.62	9.9	5.1	1.4	1	0	0	1	1	1	0	Co-chaperone	HscB	tetracysteine	metal	binding	motif
RNA_pol_Rpb6	PF01192.22	gi|289596604|ref|YP_003483300.1|	-	6e-14	51.7	0.0	8.8e-14	51.2	0.0	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb6
Beta-Casp	PF10996.8	gi|289596605|ref|YP_003483301.1|	-	1.4e-14	54.4	0.0	2.7e-14	53.4	0.0	1.5	1	0	0	1	1	1	1	Beta-Casp	domain
RMMBL	PF07521.12	gi|289596605|ref|YP_003483301.1|	-	3e-13	49.5	0.1	5.3e-13	48.7	0.1	1.4	1	0	0	1	1	1	1	Zn-dependent	metallo-hydrolase	RNA	specificity	domain
Lactamase_B_6	PF16661.5	gi|289596605|ref|YP_003483301.1|	-	1.5e-09	37.6	0.0	2.2e-09	37.0	0.0	1.2	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.7	gi|289596605|ref|YP_003483301.1|	-	1.3e-08	34.6	0.3	1.2e-06	28.2	0.2	2.4	2	1	0	2	2	2	2	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|289596605|ref|YP_003483301.1|	-	1.6e-06	28.3	0.8	4e-06	27.0	0.8	1.7	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
PhoU	PF01895.19	gi|289596606|ref|YP_003483302.1|	-	6.4e-15	55.4	4.5	9.7e-15	54.8	4.5	1.3	1	0	0	1	1	1	1	PhoU	domain
TrkA_C	PF02080.21	gi|289596606|ref|YP_003483302.1|	-	7.4e-14	51.3	0.0	2.5e-13	49.7	0.0	1.8	2	0	0	2	2	2	1	TrkA-C	domain
PhoU_div	PF01865.16	gi|289596606|ref|YP_003483302.1|	-	0.00065	19.1	2.0	0.00083	18.7	2.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF47
TrkA_C	PF02080.21	gi|289596607|ref|YP_003483303.1|	-	5e-15	55.1	0.3	9.9e-15	54.1	0.3	1.5	1	0	0	1	1	1	1	TrkA-C	domain
PhoU	PF01895.19	gi|289596607|ref|YP_003483303.1|	-	3e-06	27.6	4.6	4.6e-06	27.0	4.6	1.3	1	0	0	1	1	1	1	PhoU	domain
CCDC92	PF14916.6	gi|289596607|ref|YP_003483303.1|	-	0.0074	16.0	0.0	0.015	15.0	0.0	1.4	1	0	0	1	1	1	1	Coiled-coil	domain	of	unknown	function
Cupin_6	PF12852.7	gi|289596607|ref|YP_003483303.1|	-	0.024	14.4	0.0	0.041	13.6	0.0	1.3	1	0	0	1	1	1	0	Cupin
CENP-F_leu_zip	PF10473.9	gi|289596607|ref|YP_003483303.1|	-	0.027	14.5	0.6	0.04	14.0	0.6	1.3	1	0	0	1	1	1	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
WEMBL	PF05701.11	gi|289596607|ref|YP_003483303.1|	-	0.033	12.9	1.5	0.042	12.5	1.5	1.1	1	0	0	1	1	1	0	Weak	chloroplast	movement	under	blue	light
DUF134	PF02001.16	gi|289596608|ref|YP_003483304.1|	-	1.2e-23	83.5	0.0	1.4e-23	83.2	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF134
Sigma70_r4_2	PF08281.12	gi|289596608|ref|YP_003483304.1|	-	4.6e-07	29.4	0.1	6.4e-07	28.9	0.1	1.2	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_23	PF13384.6	gi|289596608|ref|YP_003483304.1|	-	8.3e-06	25.5	0.0	1.7e-05	24.5	0.0	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
Sigma70_r4	PF04545.16	gi|289596608|ref|YP_003483304.1|	-	8.5e-06	25.2	0.2	1.3e-05	24.6	0.2	1.2	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_3	PF01381.22	gi|289596608|ref|YP_003483304.1|	-	0.0018	18.3	0.1	0.0029	17.6	0.1	1.4	1	0	0	1	1	1	1	Helix-turn-helix
Sigma70_ECF	PF07638.11	gi|289596608|ref|YP_003483304.1|	-	0.0018	18.2	0.1	0.0022	17.9	0.1	1.1	1	0	0	1	1	1	1	ECF	sigma	factor
HTH_psq	PF05225.16	gi|289596608|ref|YP_003483304.1|	-	0.0021	17.7	0.0	0.0035	17.0	0.0	1.3	1	0	0	1	1	1	1	helix-turn-helix,	Psq	domain
HTH_31	PF13560.6	gi|289596608|ref|YP_003483304.1|	-	0.0037	17.6	0.1	0.0047	17.2	0.1	1.4	1	1	0	1	1	1	1	Helix-turn-helix	domain
HTH_11	PF08279.12	gi|289596608|ref|YP_003483304.1|	-	0.0048	16.8	0.0	0.0074	16.2	0.0	1.4	1	1	0	1	1	1	1	HTH	domain
GerE	PF00196.19	gi|289596608|ref|YP_003483304.1|	-	0.0055	16.2	0.1	0.007	15.9	0.1	1.2	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	luxR	family
HTH_28	PF13518.6	gi|289596608|ref|YP_003483304.1|	-	0.0065	16.6	0.0	0.0065	16.6	0.0	2.5	3	0	0	3	3	2	1	Helix-turn-helix	domain
HTH_8	PF02954.19	gi|289596608|ref|YP_003483304.1|	-	0.01	15.6	0.0	0.026	14.3	0.0	1.7	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	Fis	family
HTH_17	PF12728.7	gi|289596608|ref|YP_003483304.1|	-	0.018	15.2	0.1	0.05	13.8	0.1	1.9	2	1	0	2	2	2	0	Helix-turn-helix	domain
HTH_10	PF04967.12	gi|289596608|ref|YP_003483304.1|	-	0.021	14.6	0.2	0.044	13.6	0.0	1.6	2	0	0	2	2	2	0	HTH	DNA	binding	domain
KORA	PF16509.5	gi|289596608|ref|YP_003483304.1|	-	0.067	13.5	0.0	0.087	13.1	0.0	1.2	1	0	0	1	1	1	0	TrfB	plasmid	transcriptional	repressor
HTH_29	PF13551.6	gi|289596608|ref|YP_003483304.1|	-	0.077	13.0	0.0	0.077	13.0	0.0	2.4	3	0	0	3	3	3	0	Winged	helix-turn	helix
HTH_1	PF00126.27	gi|289596608|ref|YP_003483304.1|	-	0.084	12.8	0.0	0.12	12.4	0.0	1.2	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
HTH_Tnp_1_2	PF13022.6	gi|289596608|ref|YP_003483304.1|	-	0.085	13.0	0.0	0.11	12.7	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	of	insertion	element	transposase
HTH_37	PF13744.6	gi|289596608|ref|YP_003483304.1|	-	0.088	12.8	0.0	0.12	12.4	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
H_PPase	PF03030.16	gi|289596609|ref|YP_003483305.1|	-	6.2e-272	904.0	40.2	7.1e-272	903.8	40.2	1.0	1	0	0	1	1	1	1	Inorganic	H+	pyrophosphatase
DUF2231	PF09990.9	gi|289596609|ref|YP_003483305.1|	-	9.1	6.8	15.3	7.4	7.1	0.2	4.2	3	1	0	4	4	4	0	Predicted	membrane	protein	(DUF2231)
MS_channel	PF00924.18	gi|289596610|ref|YP_003483306.1|	-	6e-52	176.2	3.2	1.7e-51	174.7	3.2	1.8	1	0	0	1	1	1	1	Mechanosensitive	ion	channel
FixG_C	PF11614.8	gi|289596610|ref|YP_003483306.1|	-	0.0075	16.5	0.0	0.016	15.4	0.0	1.5	1	0	0	1	1	1	1	IG-like	fold	at	C-terminal	of	FixG,	putative	oxidoreductase
DIM	PF08194.12	gi|289596610|ref|YP_003483306.1|	-	0.14	12.4	0.2	0.14	12.4	0.2	2.1	2	0	0	2	2	2	0	DIM	protein
AAA_17	PF13207.6	gi|289596612|ref|YP_003483308.1|	-	7.5e-13	49.1	0.1	1e-12	48.7	0.1	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.6	gi|289596612|ref|YP_003483308.1|	-	8.5e-10	39.3	0.4	1.2e-09	38.8	0.4	1.2	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.6	gi|289596612|ref|YP_003483308.1|	-	0.0057	16.8	0.0	0.016	15.4	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
Zeta_toxin	PF06414.12	gi|289596612|ref|YP_003483308.1|	-	0.092	12.0	0.0	0.22	10.8	0.0	1.8	1	1	0	1	1	1	0	Zeta	toxin
Nif11	PF07862.11	gi|289596612|ref|YP_003483308.1|	-	0.21	11.9	2.3	0.23	11.8	0.1	2.2	3	0	0	3	3	3	0	Nif11	domain
zinc_ribbon_2	PF13240.6	gi|289596613|ref|YP_003483309.1|	-	0.029	14.1	1.2	0.077	12.7	1.2	1.8	1	1	0	1	1	1	0	zinc-ribbon	domain
DZR	PF12773.7	gi|289596613|ref|YP_003483309.1|	-	0.03	14.3	0.3	0.051	13.6	0.3	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
zf-C4_Topoisom	PF01396.19	gi|289596613|ref|YP_003483309.1|	-	0.032	14.0	0.6	1	9.2	0.1	2.4	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
zf-ribbon_3	PF13248.6	gi|289596613|ref|YP_003483309.1|	-	0.066	12.6	1.7	0.21	11.0	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF3268	PF11672.8	gi|289596613|ref|YP_003483309.1|	-	0.11	12.8	1.5	0.24	11.7	0.1	2.0	1	1	1	2	2	2	0	zinc-finger-containing	domain
RNA_POL_M_15KD	PF02150.16	gi|289596613|ref|YP_003483309.1|	-	0.14	12.0	0.6	0.55	10.1	0.0	2.1	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
zf-RING_7	PF02591.15	gi|289596613|ref|YP_003483309.1|	-	0.23	11.7	2.4	0.27	11.5	0.6	2.0	1	1	1	2	2	2	0	C4-type	zinc	ribbon	domain
CW_binding_1	PF01473.20	gi|289596613|ref|YP_003483309.1|	-	0.68	10.4	10.2	1.7	9.1	0.7	2.5	2	0	0	2	2	2	0	Putative	cell	wall	binding	repeat
zf-Di19	PF05605.12	gi|289596613|ref|YP_003483309.1|	-	2.4	8.5	4.7	5.6	7.4	0.6	2.2	1	1	1	2	2	2	0	Drought	induced	19	protein	(Di19),	zinc-binding
Pterin_bind	PF00809.22	gi|289596614|ref|YP_003483310.1|	-	4.1e-86	288.6	0.0	6.1e-86	288.0	0.0	1.3	1	0	0	1	1	1	1	Pterin	binding	enzyme
PEP_mutase	PF13714.6	gi|289596614|ref|YP_003483310.1|	-	0.033	13.6	0.0	0.12	11.8	0.0	1.9	1	1	1	2	2	2	0	Phosphoenolpyruvate	phosphomutase
CdhD	PF03599.16	gi|289596614|ref|YP_003483310.1|	-	0.044	12.5	0.1	0.1	11.3	0.1	1.7	1	1	0	1	1	1	0	CO	dehydrogenase/acetyl-CoA	synthase	delta	subunit
CAT_RBD	PF03123.15	gi|289596614|ref|YP_003483310.1|	-	0.079	12.9	0.2	0.18	11.7	0.2	1.6	1	0	0	1	1	1	0	CAT	RNA	binding	domain
Amidohydro_1	PF01979.20	gi|289596614|ref|YP_003483310.1|	-	0.13	11.5	0.0	12	5.1	0.0	2.2	2	0	0	2	2	2	0	Amidohydrolase	family
EAV_GS	PF01309.18	gi|289596614|ref|YP_003483310.1|	-	0.15	11.7	0.0	0.86	9.2	0.0	2.0	2	0	0	2	2	2	0	Equine	arteritis	virus	small	envelope	glycoprotein
Xan_ur_permease	PF00860.20	gi|289596615|ref|YP_003483311.1|	-	2.2e-38	132.0	42.8	2.2e-38	132.0	42.8	1.5	1	1	0	1	1	1	1	Permease	family
tRNA_SAD	PF07973.14	gi|289596616|ref|YP_003483312.1|	-	0.00063	19.8	0.0	0.0013	18.7	0.0	1.5	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
DUF2058	PF09831.9	gi|289596616|ref|YP_003483312.1|	-	0.09	12.9	0.0	0.11	12.6	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2058)
GTP_EFTU	PF00009.27	gi|289596617|ref|YP_003483313.1|	-	5.2e-33	114.2	0.2	3.4e-32	111.6	0.2	2.1	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D4	PF14578.6	gi|289596617|ref|YP_003483313.1|	-	6.3e-28	96.5	2.2	3e-27	94.3	2.2	2.3	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	4
IF-2	PF11987.8	gi|289596617|ref|YP_003483313.1|	-	1.5e-19	70.0	1.5	1.5e-19	70.0	1.5	2.2	2	0	0	2	2	2	1	Translation-initiation	factor	2
GTP_EFTU_D2	PF03144.25	gi|289596617|ref|YP_003483313.1|	-	2e-17	63.4	6.6	3.6e-12	46.5	0.0	2.8	2	0	0	2	2	2	2	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.23	gi|289596617|ref|YP_003483313.1|	-	4.4e-08	33.2	0.1	1.4e-07	31.6	0.1	1.9	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
Dynamin_N	PF00350.23	gi|289596617|ref|YP_003483313.1|	-	0.0024	17.9	0.0	0.37	10.8	0.0	3.1	2	1	1	3	3	3	1	Dynamin	family
Roc	PF08477.13	gi|289596617|ref|YP_003483313.1|	-	0.012	15.8	0.0	0.027	14.7	0.0	1.6	1	0	0	1	1	1	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
ATP_bind_1	PF03029.17	gi|289596617|ref|YP_003483313.1|	-	0.012	15.4	0.0	0.039	13.7	0.0	1.7	1	1	1	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
Ras	PF00071.22	gi|289596617|ref|YP_003483313.1|	-	0.026	14.1	0.0	0.053	13.1	0.0	1.5	1	0	0	1	1	1	0	Ras	family
Sec23_helical	PF04815.15	gi|289596617|ref|YP_003483313.1|	-	0.11	12.4	0.0	0.36	10.7	0.0	1.8	2	0	0	2	2	2	0	Sec23/Sec24	helical	domain
PAPS_reduct	PF01507.19	gi|289596618|ref|YP_003483314.1|	-	6e-31	107.8	0.0	9.5e-31	107.2	0.0	1.3	1	0	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
BPL_LplA_LipB	PF03099.19	gi|289596619|ref|YP_003483315.1|	-	1.5e-14	54.0	0.0	2e-14	53.6	0.0	1.2	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
BPL_C	PF02237.17	gi|289596619|ref|YP_003483315.1|	-	4e-08	33.0	0.2	8e-08	32.1	0.2	1.5	1	0	0	1	1	1	1	Biotin	protein	ligase	C	terminal	domain
CARDB	PF07705.11	gi|289596620|ref|YP_003483316.1|	-	5e-15	55.6	16.6	2.4e-07	30.9	1.3	6.3	5	0	0	5	5	5	3	CARDB
VWA_2	PF13519.6	gi|289596620|ref|YP_003483316.1|	-	9.7e-12	45.5	0.0	2.3e-11	44.3	0.0	1.7	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
Pilin_N	PF07790.11	gi|289596620|ref|YP_003483316.1|	-	2.4e-09	38.0	0.9	3.2e-08	34.4	0.1	3.2	3	0	0	3	3	3	1	Archaeal	Type	IV	pilin,	N-terminal
VWA	PF00092.28	gi|289596620|ref|YP_003483316.1|	-	6e-09	36.4	0.0	1.7e-08	34.9	0.0	1.8	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA_3	PF13768.6	gi|289596620|ref|YP_003483316.1|	-	0.00074	19.5	0.0	0.0036	17.2	0.0	2.0	1	1	0	1	1	1	1	von	Willebrand	factor	type	A	domain
PQQ	PF01011.21	gi|289596620|ref|YP_003483316.1|	-	0.013	15.4	0.1	0.28	11.2	0.0	2.8	2	0	0	2	2	2	0	PQQ	enzyme	repeat
BNR	PF02012.20	gi|289596620|ref|YP_003483316.1|	-	0.068	13.2	0.3	0.73	10.1	0.3	3.0	1	0	0	1	1	1	0	BNR/Asp-box	repeat
Lysyl_oxidase	PF01186.17	gi|289596620|ref|YP_003483316.1|	-	0.089	12.4	1.2	0.15	11.7	0.1	1.9	2	0	0	2	2	2	0	Lysyl	oxidase
PK	PF00224.21	gi|289596621|ref|YP_003483317.1|	-	1.1e-105	353.3	8.4	1.8e-105	352.7	8.4	1.3	1	0	0	1	1	1	1	Pyruvate	kinase,	barrel	domain
PK_C	PF02887.16	gi|289596621|ref|YP_003483317.1|	-	2.5e-30	105.1	0.0	7.1e-30	103.6	0.0	1.8	1	0	0	1	1	1	1	Pyruvate	kinase,	alpha/beta	domain
HpcH_HpaI	PF03328.14	gi|289596621|ref|YP_003483317.1|	-	0.0034	16.6	0.5	0.013	14.6	0.1	1.9	2	0	0	2	2	2	1	HpcH/HpaI	aldolase/citrate	lyase	family
DUF3933	PF13069.6	gi|289596621|ref|YP_003483317.1|	-	0.12	12.3	0.0	2.5	8.0	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3933)
DDE_Tnp_1	PF01609.21	gi|289596623|ref|YP_003483319.1|	-	5.1e-22	78.6	1.3	7.1e-22	78.1	0.3	1.7	2	0	0	2	2	2	1	Transposase	DDE	domain
DDE_Tnp_1_3	PF13612.6	gi|289596623|ref|YP_003483319.1|	-	0.00018	21.5	0.0	0.00034	20.6	0.0	1.4	1	0	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1_6	PF13751.6	gi|289596623|ref|YP_003483319.1|	-	0.003	17.8	0.1	0.0078	16.4	0.0	1.7	2	0	0	2	2	2	1	Transposase	DDE	domain
DUF772	PF05598.11	gi|289596623|ref|YP_003483319.1|	-	0.0068	16.4	0.5	0.015	15.3	0.5	1.5	1	0	0	1	1	1	1	Transposase	domain	(DUF772)
Phage_GPA	PF05840.13	gi|289596623|ref|YP_003483319.1|	-	0.073	12.2	0.2	0.12	11.5	0.2	1.3	1	0	0	1	1	1	0	Bacteriophage	replication	gene	A	protein	(GPA)
ATPase	PF06745.13	gi|289596624|ref|YP_003483320.1|	-	1.2e-66	224.4	0.1	1.4e-66	224.2	0.1	1.0	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.6	gi|289596624|ref|YP_003483320.1|	-	7.4e-06	25.7	0.0	1.1e-05	25.1	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
Rad51	PF08423.11	gi|289596624|ref|YP_003483320.1|	-	4.4e-05	22.9	0.1	5.6e-05	22.5	0.1	1.3	1	1	0	1	1	1	1	Rad51
AAA_14	PF13173.6	gi|289596624|ref|YP_003483320.1|	-	0.00017	21.6	0.1	0.00035	20.6	0.1	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_24	PF13479.6	gi|289596624|ref|YP_003483320.1|	-	0.0016	18.2	0.0	0.0034	17.1	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.17	gi|289596624|ref|YP_003483320.1|	-	0.0054	16.5	0.0	0.019	14.7	0.0	1.9	1	1	0	1	1	1	1	IstB-like	ATP	binding	protein
ATPase_2	PF01637.18	gi|289596624|ref|YP_003483320.1|	-	0.0088	16.0	0.3	0.013	15.4	0.3	1.4	1	0	0	1	1	1	1	ATPase	domain	predominantly	from	Archaea
AAA	PF00004.29	gi|289596624|ref|YP_003483320.1|	-	0.018	15.4	0.1	0.051	14.0	0.1	1.7	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.6	gi|289596624|ref|YP_003483320.1|	-	0.034	14.4	0.0	0.061	13.6	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
DUF775	PF05603.12	gi|289596624|ref|YP_003483320.1|	-	0.056	13.0	0.3	0.078	12.5	0.3	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF775)
CobA_CobO_BtuR	PF02572.15	gi|289596624|ref|YP_003483320.1|	-	0.12	12.6	0.2	0.21	11.9	0.2	1.5	1	0	0	1	1	1	0	ATP:corrinoid	adenosyltransferase	BtuR/CobO/CobP
TALPID3	PF15324.6	gi|289596624|ref|YP_003483320.1|	-	0.14	9.9	0.1	0.18	9.5	0.1	1.0	1	0	0	1	1	1	0	Hedgehog	signalling	target
Sigma70_r4_2	PF08281.12	gi|289596625|ref|YP_003483321.1|	-	0.0002	20.9	0.1	0.00048	19.8	0.1	1.7	1	0	0	1	1	1	1	Sigma-70,	region	4
GerE	PF00196.19	gi|289596625|ref|YP_003483321.1|	-	0.0003	20.3	0.2	0.0095	15.5	0.1	2.5	1	1	1	2	2	2	1	Bacterial	regulatory	proteins,	luxR	family
HTH_23	PF13384.6	gi|289596625|ref|YP_003483321.1|	-	0.00031	20.4	0.1	0.0012	18.6	0.0	2.0	2	0	0	2	2	2	1	Homeodomain-like	domain
MTH865	PF07747.11	gi|289596625|ref|YP_003483321.1|	-	0.00094	18.9	0.0	0.029	14.1	0.0	2.3	2	0	0	2	2	2	1	MTH865-like	family
HTH_10	PF04967.12	gi|289596625|ref|YP_003483321.1|	-	0.0023	17.7	0.1	0.0057	16.4	0.1	1.7	1	0	0	1	1	1	1	HTH	DNA	binding	domain
HTH_Crp_2	PF13545.6	gi|289596625|ref|YP_003483321.1|	-	0.0091	16.0	0.0	0.023	14.6	0.0	1.7	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
Sigma70_r4	PF04545.16	gi|289596625|ref|YP_003483321.1|	-	0.011	15.3	0.0	0.025	14.1	0.0	1.7	1	0	0	1	1	1	0	Sigma-70,	region	4
DUF2795	PF11387.8	gi|289596625|ref|YP_003483321.1|	-	0.011	15.9	0.0	0.031	14.5	0.0	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2795)
HTH_Tnp_ISL3	PF13542.6	gi|289596625|ref|YP_003483321.1|	-	0.014	14.8	0.2	0.053	12.9	0.0	2.1	3	0	0	3	3	3	0	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_Mga	PF08280.11	gi|289596625|ref|YP_003483321.1|	-	0.014	15.4	0.1	0.028	14.5	0.1	1.5	1	0	0	1	1	1	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
Sigma70_r3	PF04539.16	gi|289596625|ref|YP_003483321.1|	-	0.018	15.1	0.2	0.041	14.0	0.2	1.6	1	0	0	1	1	1	0	Sigma-70	region	3
Phage_terminase	PF10668.9	gi|289596625|ref|YP_003483321.1|	-	0.042	13.8	0.1	0.21	11.6	0.0	2.2	3	0	0	3	3	2	0	Phage	terminase	small	subunit
RepL	PF05732.11	gi|289596625|ref|YP_003483321.1|	-	0.054	12.9	0.1	0.085	12.3	0.1	1.3	1	0	0	1	1	1	0	Firmicute	plasmid	replication	protein	(RepL)
HTH_17	PF12728.7	gi|289596625|ref|YP_003483321.1|	-	0.084	13.1	0.0	0.22	11.7	0.0	1.8	1	0	0	1	1	1	0	Helix-turn-helix	domain
WSN	PF02206.18	gi|289596625|ref|YP_003483321.1|	-	0.085	12.8	0.0	0.16	11.9	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function
HTH_24	PF13412.6	gi|289596625|ref|YP_003483321.1|	-	0.089	12.4	0.1	0.19	11.3	0.1	1.6	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
HTH_38	PF13936.6	gi|289596625|ref|YP_003483321.1|	-	0.097	12.5	0.4	0.43	10.4	0.1	2.2	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_11	PF08279.12	gi|289596625|ref|YP_003483321.1|	-	0.1	12.5	0.1	0.36	10.8	0.1	1.9	1	0	0	1	1	1	0	HTH	domain
Topoisom_bac	PF01131.20	gi|289596626|ref|YP_003483322.1|	-	2.5e-69	234.3	0.1	2.2e-51	175.2	0.0	2.6	1	1	1	2	2	2	2	DNA	topoisomerase
Toprim	PF01751.22	gi|289596626|ref|YP_003483322.1|	-	8.3e-25	87.0	0.0	3.5e-24	85.0	0.0	2.2	2	0	0	2	2	2	1	Toprim	domain
DEAD	PF00270.29	gi|289596626|ref|YP_003483322.1|	-	3.2e-11	43.3	0.0	6.4e-11	42.3	0.0	1.5	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.31	gi|289596626|ref|YP_003483322.1|	-	7.5e-10	39.1	0.0	0.0011	19.2	0.1	4.3	3	1	0	3	3	3	2	Helicase	conserved	C-terminal	domain
ResIII	PF04851.15	gi|289596626|ref|YP_003483322.1|	-	1.1e-07	32.0	0.3	2.6e-07	30.8	0.3	1.5	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
NRDD	PF13597.6	gi|289596626|ref|YP_003483322.1|	-	0.0083	15.0	0.3	0.016	14.0	0.3	1.4	1	0	0	1	1	1	1	Anaerobic	ribonucleoside-triphosphate	reductase
HypA	PF01155.19	gi|289596626|ref|YP_003483322.1|	-	0.024	14.7	2.0	0.039	14.0	0.1	2.1	2	0	0	2	2	2	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
DZR	PF12773.7	gi|289596626|ref|YP_003483322.1|	-	0.22	11.6	2.9	4.4	7.4	0.4	2.3	2	0	0	2	2	2	0	Double	zinc	ribbon
DUF3618	PF12277.8	gi|289596626|ref|YP_003483322.1|	-	0.27	11.5	3.4	0.82	10.0	3.4	1.9	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3618)
Zn-ribbon_8	PF09723.10	gi|289596626|ref|YP_003483322.1|	-	0.42	10.8	4.1	0.96	9.6	1.1	2.5	2	0	0	2	2	2	0	Zinc	ribbon	domain
zinc-ribbons_6	PF07191.12	gi|289596626|ref|YP_003483322.1|	-	0.44	10.6	5.3	7.1	6.7	0.4	2.3	2	0	0	2	2	2	0	zinc-ribbons
Zn_Tnp_IS1595	PF12760.7	gi|289596626|ref|YP_003483322.1|	-	0.6	10.1	4.4	0.92	9.5	0.1	2.9	3	0	0	3	3	3	0	Transposase	zinc-ribbon	domain
zf-trcl	PF13451.6	gi|289596626|ref|YP_003483322.1|	-	1.3	9.0	3.9	8.6	6.4	0.0	2.7	3	0	0	3	3	3	0	Probable	zinc-ribbon	domain
UPF0547	PF10571.9	gi|289596626|ref|YP_003483322.1|	-	1.3	9.1	6.2	2.5	8.3	0.2	3.0	3	0	0	3	3	3	0	Uncharacterised	protein	family	UPF0547
DUF35_N	PF12172.8	gi|289596626|ref|YP_003483322.1|	-	1.6	8.7	4.8	0.44	10.5	1.1	1.9	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
RecR	PF02132.15	gi|289596626|ref|YP_003483322.1|	-	2.8	7.6	5.0	0.76	9.4	0.9	2.1	2	0	0	2	2	2	0	RecR	protein
TGS	PF02824.21	gi|289596627|ref|YP_003483323.1|	-	0.08	13.0	0.0	0.14	12.3	0.0	1.3	1	0	0	1	1	1	0	TGS	domain
TFIIS_C	PF01096.18	gi|289596628|ref|YP_003483324.1|	-	7e-20	70.6	9.7	1.6e-19	69.4	1.3	3.1	3	0	0	3	3	3	1	Transcription	factor	S-II	(TFIIS)
RNA_POL_M_15KD	PF02150.16	gi|289596628|ref|YP_003483324.1|	-	3e-12	46.2	1.1	3e-12	46.2	1.1	3.3	3	0	0	3	3	3	1	RNA	polymerases	M/15	Kd	subunit
zinc_ribbon_2	PF13240.6	gi|289596628|ref|YP_003483324.1|	-	4.1e-09	35.9	10.8	0.1	12.3	0.1	4.2	4	0	0	4	4	4	4	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.11	gi|289596628|ref|YP_003483324.1|	-	5.7e-09	35.8	4.9	0.00048	20.0	0.4	2.4	1	1	1	2	2	2	2	Putative	transposase	DNA-binding	domain
zf-ribbon_3	PF13248.6	gi|289596628|ref|YP_003483324.1|	-	1.6e-08	33.7	10.6	0.00047	19.5	1.4	3.3	3	0	0	3	3	3	3	zinc-ribbon	domain
PhnA_Zn_Ribbon	PF08274.12	gi|289596628|ref|YP_003483324.1|	-	6.7e-08	32.4	9.4	0.098	12.6	0.0	4.1	4	0	0	4	4	4	3	PhnA	Zinc-Ribbon
zf-NADH-PPase	PF09297.11	gi|289596628|ref|YP_003483324.1|	-	1.5e-07	30.9	10.5	5e-05	22.9	1.0	3.4	3	0	0	3	3	3	1	NADH	pyrophosphatase	zinc	ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|289596628|ref|YP_003483324.1|	-	4.7e-07	29.2	9.9	0.00061	19.2	0.6	3.2	2	1	1	3	3	3	2	TFIIB	zinc-binding
Zn_Tnp_IS1595	PF12760.7	gi|289596628|ref|YP_003483324.1|	-	2e-06	27.7	13.1	0.0091	15.9	4.3	3.2	2	1	0	2	2	2	2	Transposase	zinc-ribbon	domain
zf_UBZ	PF18439.1	gi|289596628|ref|YP_003483324.1|	-	4.1e-06	26.3	8.3	1.8	8.2	0.0	4.3	4	0	0	4	4	4	1	Ubiquitin-Binding	Zinc	Finger
DZR	PF12773.7	gi|289596628|ref|YP_003483324.1|	-	7.1e-06	25.9	8.4	0.004	17.2	0.6	2.7	2	1	0	2	2	2	2	Double	zinc	ribbon
zf-RRN7	PF11781.8	gi|289596628|ref|YP_003483324.1|	-	5.5e-05	22.8	8.7	0.0011	18.6	0.1	3.1	3	0	0	3	3	3	1	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
zf-IS66	PF13005.7	gi|289596628|ref|YP_003483324.1|	-	9.8e-05	22.7	10.4	1.5	9.2	0.4	4.2	3	1	1	4	4	4	1	zinc-finger	binding	domain	of	transposase	IS66
zf-C4_Topoisom	PF01396.19	gi|289596628|ref|YP_003483324.1|	-	0.00024	20.8	10.5	0.28	11.0	2.9	3.9	3	1	0	3	3	3	1	Topoisomerase	DNA	binding	C4	zinc	finger
Prok-RING_1	PF14446.6	gi|289596628|ref|YP_003483324.1|	-	0.00028	20.8	5.3	0.88	9.6	0.8	3.4	3	0	0	3	3	3	2	Prokaryotic	RING	finger	family	1
zinc_ribbon_10	PF10058.9	gi|289596628|ref|YP_003483324.1|	-	0.00038	20.1	11.2	0.0043	16.7	1.1	3.6	2	2	0	2	2	2	1	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
A2L_zn_ribbon	PF08792.10	gi|289596628|ref|YP_003483324.1|	-	0.00052	19.7	10.4	3.3	7.5	0.1	4.5	5	0	0	5	5	4	0	A2L	zinc	ribbon	domain
UPF0547	PF10571.9	gi|289596628|ref|YP_003483324.1|	-	0.00063	19.8	17.6	0.14	12.3	0.5	4.3	4	0	0	4	4	4	1	Uncharacterised	protein	family	UPF0547
zinc-ribbons_6	PF07191.12	gi|289596628|ref|YP_003483324.1|	-	0.00094	19.1	6.0	0.097	12.7	0.3	2.6	2	1	0	2	2	2	2	zinc-ribbons
DUF1610	PF07754.11	gi|289596628|ref|YP_003483324.1|	-	0.0012	18.8	15.5	1.6	8.8	0.4	4.3	4	0	0	4	4	4	1	Domain	of	unknown	function	(DUF1610)
IBR	PF01485.21	gi|289596628|ref|YP_003483324.1|	-	0.0013	18.9	9.9	0.072	13.3	1.8	2.9	1	1	0	2	2	2	2	IBR	domain,	a	half	RING-finger	domain
DUF35_N	PF12172.8	gi|289596628|ref|YP_003483324.1|	-	0.0022	17.8	10.2	0.83	9.6	1.5	3.6	3	1	0	3	3	3	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Nudix_N_2	PF14803.6	gi|289596628|ref|YP_003483324.1|	-	0.0029	17.5	13.9	1.5	8.8	4.4	3.9	3	1	1	4	4	4	1	Nudix	N-terminal
Auto_anti-p27	PF06677.12	gi|289596628|ref|YP_003483324.1|	-	0.0032	17.6	7.4	0.2	11.9	1.8	3.3	3	0	0	3	3	3	1	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
DUF4428	PF14471.6	gi|289596628|ref|YP_003483324.1|	-	0.0039	17.1	5.6	0.74	9.8	1.0	3.3	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF4428)
HypA	PF01155.19	gi|289596628|ref|YP_003483324.1|	-	0.0063	16.5	7.1	1.6	8.7	7.1	2.7	1	1	0	1	1	1	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zinc_ribbon_4	PF13717.6	gi|289596628|ref|YP_003483324.1|	-	0.0083	16.0	12.2	0.88	9.5	0.6	4.1	3	1	2	5	5	5	1	zinc-ribbon	domain
Mut7-C	PF01927.16	gi|289596628|ref|YP_003483324.1|	-	0.011	15.8	2.7	0.21	11.7	2.3	2.9	1	1	0	1	1	1	0	Mut7-C	RNAse	domain
zf-Sec23_Sec24	PF04810.15	gi|289596628|ref|YP_003483324.1|	-	0.011	15.7	5.8	2.5	8.2	0.7	3.7	3	1	0	3	3	3	0	Sec23/Sec24	zinc	finger
zf-RING_7	PF02591.15	gi|289596628|ref|YP_003483324.1|	-	0.012	15.7	6.9	1.8	8.8	0.0	4.1	4	0	0	4	4	4	0	C4-type	zinc	ribbon	domain
TackOD1	PF18551.1	gi|289596628|ref|YP_003483324.1|	-	0.017	14.8	5.4	0.6	9.7	0.3	2.8	1	1	1	2	2	2	0	Thaumarchaeal	output	domain	1
DNA_RNApol_7kD	PF03604.13	gi|289596628|ref|YP_003483324.1|	-	0.02	14.6	11.7	1.3	8.8	0.0	4.0	3	1	0	4	4	4	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Zn-ribbon_8	PF09723.10	gi|289596628|ref|YP_003483324.1|	-	0.022	14.9	14.4	2.3	8.4	0.3	4.2	2	1	1	4	4	4	0	Zinc	ribbon	domain
Rubredoxin_2	PF18073.1	gi|289596628|ref|YP_003483324.1|	-	0.027	14.2	15.2	0.57	10.0	0.2	4.1	4	0	0	4	4	4	0	Rubredoxin	metal	binding	domain
zinc_ribbon_9	PF14369.6	gi|289596628|ref|YP_003483324.1|	-	0.028	14.7	8.2	3.4	8.0	0.1	3.9	4	0	0	4	4	4	0	zinc-ribbon
zf-SNAP50_C	PF12251.8	gi|289596628|ref|YP_003483324.1|	-	0.03	14.0	2.1	0.24	11.1	0.1	2.1	2	0	0	2	2	2	0	snRNA-activating	protein	of	50kDa	MW	C	terminal
zf-ACC	PF17848.1	gi|289596628|ref|YP_003483324.1|	-	0.031	14.3	13.8	2.2	8.4	0.1	4.1	4	0	0	4	4	4	0	Acetyl-coA	carboxylase	zinc	finger	domain
zf_C2H2_10	PF18414.1	gi|289596628|ref|YP_003483324.1|	-	0.036	13.6	13.3	5.3	6.7	0.4	4.2	4	0	0	4	4	4	0	C2H2	type	zinc-finger
Zn_ribbon_SprT	PF17283.2	gi|289596628|ref|YP_003483324.1|	-	0.036	14.0	11.5	3.1	7.8	3.3	3.7	3	1	0	3	3	3	0	SprT-like	zinc	ribbon	domain
zinc_ribbon_15	PF17032.5	gi|289596628|ref|YP_003483324.1|	-	0.039	14.7	10.9	0.2	12.4	3.5	3.1	1	1	0	2	2	2	0	zinc-ribbon	family
zf-ISL3	PF14690.6	gi|289596628|ref|YP_003483324.1|	-	0.04	14.6	11.3	17	6.2	2.2	4.1	3	1	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-UBP	PF02148.19	gi|289596628|ref|YP_003483324.1|	-	0.047	14.0	5.9	11	6.5	3.1	3.1	1	1	1	2	2	2	0	Zn-finger	in	ubiquitin-hydrolases	and	other	protein
FYDLN_acid	PF09538.10	gi|289596628|ref|YP_003483324.1|	-	0.055	14.1	9.1	10	6.9	1.5	3.9	1	1	2	3	3	3	0	Protein	of	unknown	function	(FYDLN_acid)
FYVE_2	PF02318.16	gi|289596628|ref|YP_003483324.1|	-	0.065	13.5	3.8	1.6	8.9	0.5	2.3	1	1	1	2	2	2	0	FYVE-type	zinc	finger
Rubredoxin	PF00301.20	gi|289596628|ref|YP_003483324.1|	-	0.066	13.3	12.4	10	6.3	0.1	4.2	3	1	0	3	3	3	0	Rubredoxin
GFA	PF04828.14	gi|289596628|ref|YP_003483324.1|	-	0.07	13.5	9.7	13	6.3	0.1	3.9	1	1	2	4	4	4	0	Glutathione-dependent	formaldehyde-activating	enzyme
CpXC	PF14353.6	gi|289596628|ref|YP_003483324.1|	-	0.072	13.1	11.3	6.4	6.8	0.0	4.0	1	1	2	3	3	3	0	CpXC	protein
zf-CHY	PF05495.12	gi|289596628|ref|YP_003483324.1|	-	0.073	13.6	4.3	0.34	11.4	4.3	2.1	1	1	0	1	1	1	0	CHY	zinc	finger
Ribosomal_L37e	PF01907.19	gi|289596628|ref|YP_003483324.1|	-	0.074	13.2	9.2	0.093	12.9	0.3	3.1	2	1	1	3	3	3	0	Ribosomal	protein	L37e
zf-RanBP	PF00641.18	gi|289596628|ref|YP_003483324.1|	-	0.099	12.0	1.2	0.099	12.0	1.2	3.9	4	0	0	4	4	4	0	Zn-finger	in	Ran	binding	protein	and	others
zf-C4pol	PF14260.6	gi|289596628|ref|YP_003483324.1|	-	0.11	13.0	2.4	9.1	6.8	2.4	2.6	1	1	0	1	1	1	0	C4-type	zinc-finger	of	DNA	polymerase	delta
Ogr_Delta	PF04606.12	gi|289596628|ref|YP_003483324.1|	-	0.11	12.5	15.1	3.3	7.8	6.0	3.8	3	1	0	3	3	3	0	Ogr/Delta-like	zinc	finger
YhfH	PF14149.6	gi|289596628|ref|YP_003483324.1|	-	0.11	12.5	7.9	31	4.6	0.1	4.1	4	0	0	4	4	4	0	YhfH-like	protein
DUF3268	PF11672.8	gi|289596628|ref|YP_003483324.1|	-	0.17	12.2	4.0	0.49	10.7	0.2	2.6	2	1	0	2	2	2	0	zinc-finger-containing	domain
zf-RING_4	PF14570.6	gi|289596628|ref|YP_003483324.1|	-	0.22	11.3	7.2	15	5.4	0.1	3.1	3	0	0	3	3	3	0	RING/Ubox	like	zinc-binding	domain
zinc_ribbon_13	PF09855.9	gi|289596628|ref|YP_003483324.1|	-	0.28	11.4	8.0	28	4.9	0.0	4.0	4	0	0	4	4	4	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
PriA_CRR	PF18319.1	gi|289596628|ref|YP_003483324.1|	-	0.37	10.8	0.3	0.37	10.8	0.3	3.3	3	1	0	3	3	3	0	PriA	DNA	helicase	Cys-rich	region	(CRR)	domain
PHD	PF00628.29	gi|289596628|ref|YP_003483324.1|	-	0.38	10.7	13.2	1.3	8.9	1.6	3.5	2	2	0	2	2	2	0	PHD-finger
TerY_C	PF15616.6	gi|289596628|ref|YP_003483324.1|	-	0.54	10.4	5.9	5.6	7.1	0.6	2.4	1	1	2	3	3	3	0	TerY-C	metal	binding	domain
Zn_ribbon_recom	PF13408.6	gi|289596628|ref|YP_003483324.1|	-	0.62	10.6	14.8	3.1	8.4	2.7	3.7	2	2	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
Baculo_LEF5_C	PF11792.8	gi|289596628|ref|YP_003483324.1|	-	0.69	9.6	0.0	0.69	9.6	0.0	3.3	4	0	0	4	4	4	0	Baculoviridae	late	expression	factor	5	C-terminal	domain
Ribosomal_L32p	PF01783.23	gi|289596628|ref|YP_003483324.1|	-	0.71	10.2	11.9	1.2	9.4	1.1	3.5	2	2	2	4	4	4	0	Ribosomal	L32p	protein	family
NRDD	PF13597.6	gi|289596628|ref|YP_003483324.1|	-	0.79	8.4	5.1	1.3	7.7	0.3	2.0	2	0	0	2	2	2	0	Anaerobic	ribonucleoside-triphosphate	reductase
Terminase_GpA	PF05876.12	gi|289596628|ref|YP_003483324.1|	-	0.82	8.1	9.2	0.11	11.1	2.2	2.2	2	1	0	2	2	2	0	Phage	terminase	large	subunit	(GpA)
zf-RING_11	PF17123.5	gi|289596628|ref|YP_003483324.1|	-	0.95	9.3	4.9	12	5.7	0.1	3.0	3	0	0	3	3	2	0	RING-like	zinc	finger
zf-HIT	PF04438.16	gi|289596628|ref|YP_003483324.1|	-	0.98	9.3	13.1	3.4	7.6	0.4	3.9	3	1	0	3	3	3	0	HIT	zinc	finger
Mu-like_Com	PF10122.9	gi|289596628|ref|YP_003483324.1|	-	1.1	8.8	11.3	2.1	7.8	0.6	3.2	2	1	1	3	3	3	0	Mu-like	prophage	protein	Com
DUF2318	PF10080.9	gi|289596628|ref|YP_003483324.1|	-	1.1	9.4	5.4	5.7	7.1	0.5	3.2	1	1	1	2	2	2	0	Predicted	membrane	protein	(DUF2318)
zf-TFIIB	PF13453.6	gi|289596628|ref|YP_003483324.1|	-	1.1	8.6	13.4	2.9	7.3	4.6	3.5	3	1	0	3	3	3	0	Transcription	factor	zinc-finger
Cys_rich_CPCC	PF14206.6	gi|289596628|ref|YP_003483324.1|	-	1.2	9.0	7.9	0.66	9.8	0.3	2.8	2	1	0	2	2	2	0	Cysteine-rich	CPCC
Rpr2	PF04032.16	gi|289596628|ref|YP_003483324.1|	-	1.2	9.5	7.3	21	5.5	2.1	3.4	1	1	1	2	2	2	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
Zn_ribbon_17	PF17120.5	gi|289596628|ref|YP_003483324.1|	-	1.3	8.7	9.9	9.9	5.9	0.1	3.6	3	1	0	3	3	3	0	Zinc-ribbon,	C4HC2	type
zf-B_box	PF00643.24	gi|289596628|ref|YP_003483324.1|	-	1.9	8.7	8.0	20	5.5	0.1	3.6	3	1	0	3	3	3	0	B-box	zinc	finger
Lar_restr_allev	PF14354.6	gi|289596628|ref|YP_003483324.1|	-	2.3	8.7	15.7	52	4.3	0.6	3.7	1	1	1	2	2	2	0	Restriction	alleviation	protein	Lar
zf-Mss51	PF13824.6	gi|289596628|ref|YP_003483324.1|	-	2.3	8.4	14.9	8.5	6.6	2.9	3.3	1	1	1	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
DUF1936	PF09151.10	gi|289596628|ref|YP_003483324.1|	-	2.5	8.1	18.1	7.6	6.5	0.7	3.9	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF1936)
Prim_Zn_Ribbon	PF08273.12	gi|289596628|ref|YP_003483324.1|	-	2.6	8.4	17.3	59	4.1	7.5	4.1	3	1	0	3	3	3	0	Zinc-binding	domain	of	primase-helicase
zf-CCHC_5	PF14787.6	gi|289596628|ref|YP_003483324.1|	-	2.8	7.7	16.0	1.1	9.0	0.2	3.4	3	1	0	3	3	3	0	GAG-polyprotein	viral	zinc-finger
zf_C2H2_13	PF18508.1	gi|289596628|ref|YP_003483324.1|	-	3.1	7.5	8.7	9	6.0	0.1	3.7	4	0	0	4	4	4	0	Zinc	finger	domain
DNA_ligase_ZBD	PF03119.16	gi|289596628|ref|YP_003483324.1|	-	3.2	7.9	13.5	6	7.0	0.2	3.6	3	0	0	3	3	3	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
FdhE	PF04216.12	gi|289596628|ref|YP_003483324.1|	-	3.3	7.5	9.6	0.18	11.6	3.4	2.0	1	1	1	2	2	1	0	Protein	involved	in	formate	dehydrogenase	formation
ADK_lid	PF05191.14	gi|289596628|ref|YP_003483324.1|	-	5.7	7.0	18.6	25	5.0	0.4	4.0	3	1	0	3	3	3	0	Adenylate	kinase,	active	site	lid
NOB1_Zn_bind	PF08772.11	gi|289596628|ref|YP_003483324.1|	-	7.7	6.8	16.0	28	5.0	0.1	4.0	1	1	2	3	3	3	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
Trm112p	PF03966.16	gi|289596628|ref|YP_003483324.1|	-	7.7	7.2	7.8	1.2e+02	3.4	3.6	3.5	2	1	0	2	2	2	0	Trm112p-like	protein
Methyltransf_11	PF08241.12	gi|289596629|ref|YP_003483325.1|	-	1.3e-12	48.2	0.0	2e-12	47.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|289596629|ref|YP_003483325.1|	-	1.5e-10	41.7	0.0	3.4e-10	40.5	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|289596629|ref|YP_003483325.1|	-	1.1e-05	25.3	0.0	1.9e-05	24.5	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|289596629|ref|YP_003483325.1|	-	1.6e-05	25.6	0.0	4.1e-05	24.2	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|289596629|ref|YP_003483325.1|	-	0.0002	20.8	0.0	0.00041	19.7	0.0	1.6	2	0	0	2	2	2	1	ubiE/COQ5	methyltransferase	family
MetW	PF07021.12	gi|289596629|ref|YP_003483325.1|	-	0.0011	18.6	0.0	0.0039	16.8	0.0	1.7	2	0	0	2	2	2	1	Methionine	biosynthesis	protein	MetW
Methyltransf_23	PF13489.6	gi|289596629|ref|YP_003483325.1|	-	0.0021	17.9	0.0	0.0029	17.4	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
AAA_12	PF13087.6	gi|289596630|ref|YP_003483326.1|	-	7.1e-64	215.1	0.0	1.6e-63	214.0	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_11	PF13086.6	gi|289596630|ref|YP_003483326.1|	-	6.8e-58	196.5	0.0	1.2e-57	195.7	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_30	PF13604.6	gi|289596630|ref|YP_003483326.1|	-	2.3e-12	47.1	0.0	7e-10	38.9	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
AAA_19	PF13245.6	gi|289596630|ref|YP_003483326.1|	-	2.4e-08	34.4	0.1	8e-08	32.7	0.1	1.9	1	1	0	1	1	1	1	AAA	domain
Helicase_RecD	PF05127.14	gi|289596630|ref|YP_003483326.1|	-	7.4e-07	29.2	0.2	0.00014	21.8	0.0	2.3	1	1	0	2	2	2	1	Helicase
Viral_helicase1	PF01443.18	gi|289596630|ref|YP_003483326.1|	-	3.9e-06	26.8	0.0	0.59	9.8	0.0	3.3	2	1	1	3	3	3	2	Viral	(Superfamily	1)	RNA	helicase
UvrD-helicase	PF00580.21	gi|289596630|ref|YP_003483326.1|	-	2.5e-05	23.9	1.0	0.0002	21.0	0.0	2.2	1	1	1	2	2	2	1	UvrD/REP	helicase	N-terminal	domain
DEAD	PF00270.29	gi|289596630|ref|YP_003483326.1|	-	0.00018	21.3	1.4	0.0035	17.1	1.4	2.3	1	1	0	1	1	1	1	DEAD/DEAH	box	helicase
AAA	PF00004.29	gi|289596630|ref|YP_003483326.1|	-	0.00033	21.1	1.0	0.0087	16.5	0.0	3.2	4	0	0	4	4	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
PIF1	PF05970.14	gi|289596630|ref|YP_003483326.1|	-	0.00043	19.6	0.1	0.047	12.8	0.0	2.3	2	0	0	2	2	2	1	PIF1-like	helicase
T2SSE	PF00437.20	gi|289596630|ref|YP_003483326.1|	-	0.00049	19.3	0.1	0.022	13.9	0.0	2.3	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
AAA_16	PF13191.6	gi|289596630|ref|YP_003483326.1|	-	0.0012	19.3	0.0	0.0028	18.1	0.0	1.7	1	0	0	1	1	1	1	AAA	ATPase	domain
ResIII	PF04851.15	gi|289596630|ref|YP_003483326.1|	-	0.0013	18.8	0.0	0.011	15.8	0.0	2.3	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
DUF2075	PF09848.9	gi|289596630|ref|YP_003483326.1|	-	0.0045	16.3	0.1	0.14	11.3	0.0	2.3	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
PhoH	PF02562.16	gi|289596630|ref|YP_003483326.1|	-	0.0046	16.4	0.1	0.032	13.7	0.0	2.3	2	0	0	2	2	2	1	PhoH-like	protein
AAA_22	PF13401.6	gi|289596630|ref|YP_003483326.1|	-	0.0071	16.6	0.0	0.085	13.1	0.0	2.6	2	0	0	2	2	2	1	AAA	domain
UvrD_C_2	PF13538.6	gi|289596630|ref|YP_003483326.1|	-	0.012	15.4	0.0	0.031	14.1	0.0	1.7	1	0	0	1	1	1	0	UvrD-like	helicase	C-terminal	domain
SRP54	PF00448.22	gi|289596630|ref|YP_003483326.1|	-	0.017	14.8	0.1	0.1	12.2	0.0	2.1	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
CbiA	PF01656.23	gi|289596630|ref|YP_003483326.1|	-	0.023	14.8	0.0	0.055	13.5	0.0	1.9	2	1	0	2	2	2	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_5	PF07728.14	gi|289596630|ref|YP_003483326.1|	-	0.03	14.3	0.2	3.3	7.7	0.0	3.0	3	0	0	3	3	3	0	AAA	domain	(dynein-related	subfamily)
RNA_helicase	PF00910.22	gi|289596630|ref|YP_003483326.1|	-	0.033	14.6	0.1	4.3	7.8	0.0	3.6	3	1	0	3	3	3	0	RNA	helicase
S-AdoMet_synt_N	PF00438.20	gi|289596630|ref|YP_003483326.1|	-	0.046	14.4	0.1	0.32	11.7	0.0	2.4	2	1	1	3	3	2	0	S-adenosylmethionine	synthetase,	N-terminal	domain
AAA_33	PF13671.6	gi|289596630|ref|YP_003483326.1|	-	0.05	13.8	0.3	0.12	12.5	0.2	1.8	1	1	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.17	gi|289596630|ref|YP_003483326.1|	-	0.09	12.5	0.0	0.22	11.2	0.0	1.7	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
DUF5304	PF17230.2	gi|289596630|ref|YP_003483326.1|	-	0.098	12.9	0.0	0.25	11.5	0.0	1.6	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5304)
AAA_23	PF13476.6	gi|289596630|ref|YP_003483326.1|	-	0.12	12.9	3.9	1.2	9.6	3.9	2.6	1	1	0	1	1	1	0	AAA	domain
SNF2_N	PF00176.23	gi|289596630|ref|YP_003483326.1|	-	0.13	10.9	0.3	0.37	9.5	0.1	1.7	2	0	0	2	2	2	0	SNF2	family	N-terminal	domain
Mg_chelatase	PF01078.21	gi|289596630|ref|YP_003483326.1|	-	0.17	11.2	0.1	1.4	8.2	0.1	2.1	1	1	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
Xrn1_D3	PF18194.1	gi|289596630|ref|YP_003483326.1|	-	0.37	10.9	1.9	1.4	9.1	1.6	2.1	1	1	1	2	2	2	0	Exoribonuclease	1	Domain-3
AAA_24	PF13479.6	gi|289596630|ref|YP_003483326.1|	-	0.61	9.8	4.0	1.5	8.5	2.5	2.3	1	1	1	2	2	2	0	AAA	domain
RNase_HII	PF01351.18	gi|289596631|ref|YP_003483327.1|	-	8.3e-54	182.4	1.5	9.7e-54	182.2	1.5	1.0	1	0	0	1	1	1	1	Ribonuclease	HII
DUF5036	PF16439.5	gi|289596631|ref|YP_003483327.1|	-	0.088	12.5	0.1	0.24	11.1	0.1	1.6	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF5036)
DUF3106	PF11304.8	gi|289596631|ref|YP_003483327.1|	-	0.1	13.1	2.5	13	6.3	0.9	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3106)
Lipoprotein_10	PF03202.13	gi|289596631|ref|YP_003483327.1|	-	0.16	12.4	1.0	1	9.8	0.1	2.1	2	0	0	2	2	2	0	Putative	mycoplasma	lipoprotein,	C-terminal	region
sCache_like	PF16736.5	gi|289596631|ref|YP_003483327.1|	-	0.3	11.2	3.7	0.21	11.7	1.9	1.6	2	0	0	2	2	2	0	Single	Cache-like
PolyA_pol_RNAbd	PF12627.7	gi|289596631|ref|YP_003483327.1|	-	0.32	10.8	2.0	2.5	7.9	0.1	2.8	3	0	0	3	3	3	0	Probable	RNA	and	SrmB-	binding	site	of	polymerase	A
Methyltransf_25	PF13649.6	gi|289596632|ref|YP_003483328.1|	-	4.5e-18	65.7	0.0	7.2e-18	65.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|289596632|ref|YP_003483328.1|	-	7.7e-17	61.5	0.0	9.5e-17	61.2	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|289596632|ref|YP_003483328.1|	-	3.7e-16	59.2	0.1	4.5e-16	58.9	0.1	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_11	PF08241.12	gi|289596632|ref|YP_003483328.1|	-	6.8e-16	58.7	0.0	1.3e-15	57.8	0.0	1.5	2	0	0	2	2	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|289596632|ref|YP_003483328.1|	-	1.1e-14	55.0	0.0	1.6e-14	54.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.6	gi|289596632|ref|YP_003483328.1|	-	1.7e-08	34.5	0.0	2.1e-08	34.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.19	gi|289596632|ref|YP_003483328.1|	-	6e-06	26.2	0.0	7.7e-06	25.8	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
MTS	PF05175.14	gi|289596632|ref|YP_003483328.1|	-	0.00023	20.7	0.0	0.00046	19.8	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	small	domain
Fibrillarin	PF01269.17	gi|289596632|ref|YP_003483328.1|	-	0.0022	17.1	0.0	0.003	16.7	0.0	1.1	1	0	0	1	1	1	1	Fibrillarin
Methyltransf_4	PF02390.17	gi|289596632|ref|YP_003483328.1|	-	0.0026	17.2	0.0	0.0063	16.0	0.0	1.5	2	0	0	2	2	2	1	Putative	methyltransferase
Pox_MCEL	PF03291.16	gi|289596632|ref|YP_003483328.1|	-	0.0028	16.8	0.4	0.088	11.9	0.0	2.5	2	1	0	2	2	2	1	mRNA	capping	enzyme
TPMT	PF05724.11	gi|289596632|ref|YP_003483328.1|	-	0.0051	16.5	0.0	0.024	14.3	0.0	1.9	1	1	0	1	1	1	1	Thiopurine	S-methyltransferase	(TPMT)
CheR	PF01739.18	gi|289596632|ref|YP_003483328.1|	-	0.01	15.3	0.0	1.2	8.6	0.0	2.1	1	1	1	2	2	2	0	CheR	methyltransferase,	SAM	binding	domain
FtsJ	PF01728.19	gi|289596632|ref|YP_003483328.1|	-	0.017	15.3	0.0	0.024	14.7	0.0	1.3	1	1	0	1	1	1	0	FtsJ-like	methyltransferase
RrnaAD	PF00398.20	gi|289596632|ref|YP_003483328.1|	-	0.036	13.1	0.0	0.043	12.9	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	RNA	adenine	dimethylase
Methyltransf_2	PF00891.18	gi|289596632|ref|YP_003483328.1|	-	0.042	13.1	0.0	0.053	12.8	0.0	1.2	1	0	0	1	1	1	0	O-methyltransferase	domain
DUF43	PF01861.16	gi|289596632|ref|YP_003483328.1|	-	0.078	12.2	0.1	0.12	11.6	0.1	1.2	1	0	0	1	1	1	0	Branched-chain	polyamine	synthase	A	C-terminal	domain
Methyltransf_32	PF13679.6	gi|289596632|ref|YP_003483328.1|	-	0.1	12.6	0.0	0.15	12.0	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
MPS-4	PF17523.2	gi|289596632|ref|YP_003483328.1|	-	3.2	7.9	4.5	4.6	7.4	0.1	2.6	3	0	0	3	3	3	0	MinK-related	peptide,	potassium	channel	accessory	sub-unit	protein	4
MMR_HSR1_Xtn	PF16897.5	gi|289596633|ref|YP_003483329.1|	-	5.2e-29	100.4	0.0	1.2e-28	99.2	0.0	1.7	1	0	0	1	1	1	1	C-terminal	region	of	MMR_HSR1	domain
MMR_HSR1	PF01926.23	gi|289596633|ref|YP_003483329.1|	-	1.8e-21	76.3	0.0	5.3e-21	74.8	0.0	1.8	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
TGS	PF02824.21	gi|289596633|ref|YP_003483329.1|	-	2e-21	75.8	0.0	4.2e-21	74.8	0.0	1.6	1	0	0	1	1	1	1	TGS	domain
FeoB_N	PF02421.18	gi|289596633|ref|YP_003483329.1|	-	9.3e-14	51.2	0.2	1.3e-12	47.5	0.1	2.3	2	0	0	2	2	2	1	Ferrous	iron	transport	protein	B
RsgA_GTPase	PF03193.16	gi|289596633|ref|YP_003483329.1|	-	4.2e-07	30.0	0.2	0.0053	16.7	0.0	2.4	2	0	0	2	2	2	2	RsgA	GTPase
Dynamin_N	PF00350.23	gi|289596633|ref|YP_003483329.1|	-	0.0087	16.1	0.1	0.018	15.1	0.1	1.5	1	0	0	1	1	1	1	Dynamin	family
SRPRB	PF09439.10	gi|289596633|ref|YP_003483329.1|	-	0.016	14.7	0.0	0.016	14.7	0.0	2.0	3	0	0	3	3	3	0	Signal	recognition	particle	receptor	beta	subunit
Mg_chelatase	PF01078.21	gi|289596633|ref|YP_003483329.1|	-	0.017	14.5	0.0	0.027	13.8	0.0	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
ATF7IP_BD	PF16788.5	gi|289596633|ref|YP_003483329.1|	-	0.041	14.0	3.5	0.067	13.3	3.5	1.2	1	0	0	1	1	1	0	ATF-interacting	protein	binding	domain
AIG1	PF04548.16	gi|289596633|ref|YP_003483329.1|	-	0.043	13.2	0.5	0.15	11.4	0.0	2.1	3	0	0	3	3	3	0	AIG1	family
GTP_EFTU	PF00009.27	gi|289596633|ref|YP_003483329.1|	-	0.083	12.4	0.1	0.73	9.3	0.0	2.5	2	1	0	2	2	2	0	Elongation	factor	Tu	GTP	binding	domain
Roc	PF08477.13	gi|289596633|ref|YP_003483329.1|	-	0.12	12.6	0.1	3.8	7.7	0.0	2.8	3	0	0	3	3	3	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
ACCA	PF03255.14	gi|289596633|ref|YP_003483329.1|	-	2	8.3	5.9	6.3	6.7	5.9	1.8	1	0	0	1	1	1	0	Acetyl	co-enzyme	A	carboxylase	carboxyltransferase	alpha	subunit
DUF1192	PF06698.11	gi|289596633|ref|YP_003483329.1|	-	3.1	7.9	14.6	0.66	10.1	3.2	2.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1192)
GTP-bdg_M	PF16360.5	gi|289596633|ref|YP_003483329.1|	-	6.7	7.4	12.3	2.4	8.8	5.1	2.5	1	1	1	2	2	2	0	GTP-binding	GTPase	Middle	Region
Pyr_redox_2	PF07992.14	gi|289596634|ref|YP_003483330.1|	-	9e-70	235.2	0.2	1.2e-69	234.8	0.2	1.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|289596634|ref|YP_003483330.1|	-	2e-23	82.7	1.3	3.1e-20	72.5	0.3	3.2	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|289596634|ref|YP_003483330.1|	-	4.6e-17	62.2	0.6	1.5e-15	57.3	0.2	2.9	1	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.24	gi|289596634|ref|YP_003483330.1|	-	3.3e-11	43.4	1.4	0.00088	18.9	0.0	3.9	4	0	0	4	4	4	3	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.6	gi|289596634|ref|YP_003483330.1|	-	1.7e-10	41.0	0.1	3.9e-06	27.0	0.0	3.4	3	0	0	3	3	3	2	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.14	gi|289596634|ref|YP_003483330.1|	-	2.5e-06	26.5	3.2	0.049	12.3	0.3	3.9	4	1	1	5	5	5	2	HI0933-like	protein
Pyr_redox_dim	PF02852.22	gi|289596634|ref|YP_003483330.1|	-	2.7e-06	27.6	0.8	1.2e-05	25.5	0.1	2.3	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
FAD_binding_2	PF00890.24	gi|289596634|ref|YP_003483330.1|	-	1.3e-05	24.5	0.1	0.0067	15.6	0.1	3.8	3	1	1	4	4	4	1	FAD	binding	domain
Thi4	PF01946.17	gi|289596634|ref|YP_003483330.1|	-	2.7e-05	23.6	1.0	0.14	11.4	0.0	3.2	3	0	0	3	3	3	2	Thi4	family
TrkA_N	PF02254.18	gi|289596634|ref|YP_003483330.1|	-	3.5e-05	24.0	0.1	0.043	14.1	0.0	2.6	2	0	0	2	2	2	2	TrkA-N	domain
3HCDH_N	PF02737.18	gi|289596634|ref|YP_003483330.1|	-	0.00027	20.9	0.2	0.00056	19.8	0.2	1.5	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_9	PF13454.6	gi|289596634|ref|YP_003483330.1|	-	0.00052	20.0	0.1	13	5.8	0.0	3.9	3	1	1	4	4	4	0	FAD-NAD(P)-binding
Cauli_DNA-bind	PF03310.13	gi|289596634|ref|YP_003483330.1|	-	0.00086	19.4	0.2	0.0019	18.2	0.2	1.5	1	0	0	1	1	1	1	Caulimovirus	DNA-binding	protein
FAD_binding_3	PF01494.19	gi|289596634|ref|YP_003483330.1|	-	0.00086	18.6	0.0	0.0048	16.2	0.1	2.0	2	0	0	2	2	2	1	FAD	binding	domain
ApbA	PF02558.16	gi|289596634|ref|YP_003483330.1|	-	0.0011	18.6	0.0	0.016	14.9	0.0	2.3	2	0	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
Lycopene_cycl	PF05834.12	gi|289596634|ref|YP_003483330.1|	-	0.0014	17.8	0.8	0.44	9.6	0.1	2.7	2	1	1	3	3	3	1	Lycopene	cyclase	protein
NAD_binding_7	PF13241.6	gi|289596634|ref|YP_003483330.1|	-	0.0028	18.1	0.1	0.013	15.9	0.1	2.1	2	0	0	2	2	2	1	Putative	NAD(P)-binding
K_oxygenase	PF13434.6	gi|289596634|ref|YP_003483330.1|	-	0.0031	16.7	0.0	0.0058	15.8	0.0	1.4	1	1	0	1	1	1	1	L-lysine	6-monooxygenase	(NADPH-requiring)
GIDA	PF01134.22	gi|289596634|ref|YP_003483330.1|	-	0.0048	16.0	3.3	0.18	10.9	0.3	3.6	2	1	2	4	4	4	1	Glucose	inhibited	division	protein	A
UDPG_MGDP_dh_N	PF03721.14	gi|289596634|ref|YP_003483330.1|	-	0.0096	15.5	0.1	0.025	14.2	0.1	1.7	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Shikimate_DH	PF01488.20	gi|289596634|ref|YP_003483330.1|	-	0.011	15.8	1.7	0.051	13.6	0.5	2.4	2	1	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
Glu_dehyd_C	PF16912.5	gi|289596634|ref|YP_003483330.1|	-	0.022	14.3	0.0	0.05	13.1	0.0	1.6	1	0	0	1	1	1	0	Glucose	dehydrogenase	C-terminus
Sacchrp_dh_NADP	PF03435.18	gi|289596634|ref|YP_003483330.1|	-	0.023	15.0	0.2	5.9	7.2	0.0	2.4	2	0	0	2	2	2	0	Saccharopine	dehydrogenase	NADP	binding	domain
2-Hacid_dh_C	PF02826.19	gi|289596634|ref|YP_003483330.1|	-	0.043	13.2	1.6	0.076	12.4	0.1	2.1	2	1	1	3	3	3	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Trp_halogenase	PF04820.14	gi|289596634|ref|YP_003483330.1|	-	0.056	12.3	0.1	2.4	6.9	0.0	2.3	2	0	0	2	2	2	0	Tryptophan	halogenase
NAD_binding_2	PF03446.15	gi|289596634|ref|YP_003483330.1|	-	0.064	13.4	0.1	0.16	12.1	0.1	1.7	1	0	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
ThiF	PF00899.21	gi|289596634|ref|YP_003483330.1|	-	0.068	12.5	0.0	0.33	10.3	0.0	1.9	2	0	0	2	2	2	0	ThiF	family
Amino_oxidase	PF01593.24	gi|289596634|ref|YP_003483330.1|	-	0.077	12.3	0.0	1.5	8.0	0.0	2.4	3	0	0	3	3	3	0	Flavin	containing	amine	oxidoreductase
F420_oxidored	PF03807.17	gi|289596634|ref|YP_003483330.1|	-	0.078	13.6	1.2	12	6.6	0.3	3.4	2	1	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
DUF4363	PF14276.6	gi|289596635|ref|YP_003483331.1|	-	0.015	15.4	1.4	0.017	15.2	1.4	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4363)
Clat_adaptor_s	PF01217.20	gi|289596635|ref|YP_003483331.1|	-	0.034	14.1	1.4	0.038	13.9	1.4	1.2	1	0	0	1	1	1	0	Clathrin	adaptor	complex	small	chain
DUF465	PF04325.13	gi|289596635|ref|YP_003483331.1|	-	0.056	13.5	5.1	0.086	12.9	4.8	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF465)
Hexapep	PF00132.24	gi|289596636|ref|YP_003483332.1|	-	4.9e-20	70.4	22.3	2.9e-08	33.1	8.9	4.2	3	1	1	4	4	4	4	Bacterial	transferase	hexapeptide	(six	repeats)
Hexapep_2	PF14602.6	gi|289596636|ref|YP_003483332.1|	-	5.1e-09	35.7	20.7	2.7e-06	27.0	8.0	4.2	3	1	1	4	4	4	3	Hexapeptide	repeat	of	succinyl-transferase
Fucokinase	PF07959.12	gi|289596636|ref|YP_003483332.1|	-	0.058	12.3	0.1	0.18	10.7	0.1	1.7	1	1	1	2	2	2	0	L-fucokinase
Thi4	PF01946.17	gi|289596638|ref|YP_003483334.1|	-	2.8e-79	265.7	1.1	3.2e-79	265.5	1.1	1.0	1	0	0	1	1	1	1	Thi4	family
DAO	PF01266.24	gi|289596638|ref|YP_003483334.1|	-	1.3e-10	41.4	1.3	4.1e-07	29.9	0.7	2.1	1	1	0	2	2	2	2	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.6	gi|289596638|ref|YP_003483334.1|	-	4.8e-10	39.5	0.1	1.3e-09	38.2	0.1	1.8	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_oxidored	PF12831.7	gi|289596638|ref|YP_003483334.1|	-	7e-08	32.2	0.0	1.1e-07	31.6	0.0	1.3	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.14	gi|289596638|ref|YP_003483334.1|	-	2.9e-07	30.0	0.0	4.2e-07	29.5	0.0	1.3	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.24	gi|289596638|ref|YP_003483334.1|	-	6.7e-07	28.7	0.6	4.8e-05	22.6	0.4	2.1	2	0	0	2	2	2	1	FAD	binding	domain
HI0933_like	PF03486.14	gi|289596638|ref|YP_003483334.1|	-	1.2e-05	24.2	0.1	1.5e-05	23.9	0.1	1.2	1	0	0	1	1	1	1	HI0933-like	protein
FAD_binding_3	PF01494.19	gi|289596638|ref|YP_003483334.1|	-	1.7e-05	24.3	0.0	0.00031	20.1	0.0	2.1	2	0	0	2	2	2	1	FAD	binding	domain
Pyr_redox_3	PF13738.6	gi|289596638|ref|YP_003483334.1|	-	0.00017	21.0	0.1	0.00043	19.6	0.0	1.6	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|289596638|ref|YP_003483334.1|	-	0.00051	20.5	1.0	0.0041	17.7	0.1	2.3	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_9	PF13454.6	gi|289596638|ref|YP_003483334.1|	-	0.0019	18.2	0.1	0.0043	17.0	0.1	1.6	1	0	0	1	1	1	1	FAD-NAD(P)-binding
GIDA	PF01134.22	gi|289596638|ref|YP_003483334.1|	-	0.0041	16.3	0.6	0.01	15.0	0.1	1.8	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
Amino_oxidase	PF01593.24	gi|289596638|ref|YP_003483334.1|	-	0.014	14.7	0.1	0.049	12.9	0.0	1.9	2	1	1	3	3	3	0	Flavin	containing	amine	oxidoreductase
K_oxygenase	PF13434.6	gi|289596638|ref|YP_003483334.1|	-	0.016	14.4	0.0	0.023	13.8	0.0	1.2	1	0	0	1	1	1	0	L-lysine	6-monooxygenase	(NADPH-requiring)
Trp_halogenase	PF04820.14	gi|289596638|ref|YP_003483334.1|	-	0.016	14.1	0.1	0.26	10.1	0.1	2.1	2	0	0	2	2	2	0	Tryptophan	halogenase
Lycopene_cycl	PF05834.12	gi|289596638|ref|YP_003483334.1|	-	0.077	12.0	0.0	0.35	9.9	0.0	1.8	2	0	0	2	2	2	0	Lycopene	cyclase	protein
Tubulin	PF00091.25	gi|289596639|ref|YP_003483335.1|	-	8.6e-41	140.3	0.1	1.5e-40	139.5	0.1	1.4	1	0	0	1	1	1	1	Tubulin/FtsZ	family,	GTPase	domain
FtsZ_C	PF12327.8	gi|289596639|ref|YP_003483335.1|	-	3.1e-30	104.3	0.8	3.1e-30	104.3	0.8	2.2	3	0	0	3	3	3	1	FtsZ	family,	C-terminal	domain
ZT_dimer	PF16916.5	gi|289596639|ref|YP_003483335.1|	-	0.047	13.8	0.0	5.4	7.2	0.0	3.2	3	0	0	3	3	3	0	Dimerisation	domain	of	Zinc	Transporter
ADH_zinc_N	PF00107.26	gi|289596639|ref|YP_003483335.1|	-	0.054	13.5	0.9	32	4.5	0.2	3.7	4	1	0	4	4	4	0	Zinc-binding	dehydrogenase
Arm-DNA-bind_3	PF13356.6	gi|289596639|ref|YP_003483335.1|	-	0.12	12.7	0.0	19	5.8	0.0	3.0	3	0	0	3	3	3	0	Arm	DNA-binding	domain
Tubulin_2	PF13809.6	gi|289596639|ref|YP_003483335.1|	-	0.51	9.5	7.3	0.13	11.5	0.9	2.2	1	1	0	2	2	2	0	Tubulin	like
DUF973	PF06157.11	gi|289596640|ref|YP_003483336.1|	-	1.2e-19	70.6	13.3	1.3e-19	70.4	13.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
DUF996	PF06195.13	gi|289596640|ref|YP_003483336.1|	-	1.1e-09	38.7	20.9	0.00011	22.5	7.4	2.1	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF996)
DUF1422	PF07226.11	gi|289596640|ref|YP_003483336.1|	-	0.029	14.4	0.7	0.029	14.4	0.7	2.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1422)
Phage_holin_3_6	PF07332.11	gi|289596640|ref|YP_003483336.1|	-	0.037	14.1	9.6	0.045	13.8	0.1	2.4	2	1	1	3	3	3	0	Putative	Actinobacterial	Holin-X,	holin	superfamily	III
7TM_GPCR_Srab	PF10292.9	gi|289596640|ref|YP_003483336.1|	-	0.53	9.1	3.2	0.38	9.6	0.4	2.0	2	0	0	2	2	2	0	Serpentine	type	7TM	GPCR	receptor	class	ab	chemoreceptor
DUF2681	PF10883.8	gi|289596640|ref|YP_003483336.1|	-	1.3	9.5	0.0	1.3	9.5	0.0	2.8	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF2681)
DUF5362	PF17319.2	gi|289596640|ref|YP_003483336.1|	-	1.9	8.4	18.1	1.7	8.5	0.4	3.9	4	0	0	4	4	4	0	Family	of	unknown	function	(DUF5362)
DUF975	PF06161.11	gi|289596640|ref|YP_003483336.1|	-	4.2	7.1	18.5	0.089	12.6	5.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF975)
DUF2157	PF09925.9	gi|289596640|ref|YP_003483336.1|	-	7.2	6.4	11.3	3	7.6	6.9	2.5	1	1	1	2	2	2	0	Predicted	membrane	protein	(DUF2157)
RtcB	PF01139.17	gi|289596641|ref|YP_003483337.1|	-	3e-170	566.9	0.2	3.6e-170	566.6	0.2	1.1	1	0	0	1	1	1	1	tRNA-splicing	ligase	RtcB
DBI_PRT	PF02277.17	gi|289596641|ref|YP_003483337.1|	-	0.049	12.9	0.1	0.28	10.4	0.1	1.9	1	1	0	1	1	1	0	Phosphoribosyltransferase
MFS_1	PF07690.16	gi|289596642|ref|YP_003483338.1|	-	1.9e-13	50.1	26.7	1.9e-13	50.1	26.7	1.9	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
ACP	PF06857.11	gi|289596643|ref|YP_003483339.1|	-	2.6e-15	56.4	0.2	2.9e-15	56.3	0.2	1.0	1	0	0	1	1	1	1	Malonate	decarboxylase	delta	subunit	(MdcD)
HpcH_HpaI	PF03328.14	gi|289596644|ref|YP_003483340.1|	-	6.1e-48	162.9	0.0	1.3e-47	161.8	0.0	1.5	2	0	0	2	2	2	1	HpcH/HpaI	aldolase/citrate	lyase	family
C-C_Bond_Lyase	PF15617.6	gi|289596644|ref|YP_003483340.1|	-	2.4e-13	49.9	0.0	7.5e-08	31.9	0.0	2.7	1	1	1	2	2	2	2	C-C_Bond_Lyase	of	the	TIM-Barrel	fold
CitF	PF04223.12	gi|289596645|ref|YP_003483341.1|	-	6.9e-166	552.7	3.2	8e-166	552.5	3.2	1.0	1	0	0	1	1	1	1	Citrate	lyase,	alpha	subunit	(CitF)
AcetylCoA_hyd_C	PF13336.6	gi|289596645|ref|YP_003483341.1|	-	6.8e-05	22.8	0.1	0.00014	21.8	0.1	1.5	1	0	0	1	1	1	1	Acetyl-CoA	hydrolase/transferase	C-terminal	domain
TBP	PF00352.21	gi|289596646|ref|YP_003483342.1|	-	7.6e-59	195.7	0.1	1.7e-29	101.6	0.0	2.0	2	0	0	2	2	2	2	Transcription	factor	TFIID	(or	TATA-binding	protein,	TBP)
DUF3378	PF11858.8	gi|289596646|ref|YP_003483342.1|	-	8.8e-07	29.0	0.0	0.032	14.3	0.0	3.2	2	1	0	3	3	3	2	Domain	of	unknown	function	(DUF3378)
DUF2120	PF09893.9	gi|289596646|ref|YP_003483342.1|	-	0.0043	17.2	0.4	0.24	11.5	0.4	2.2	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2120)
DUF3552	PF12072.8	gi|289596647|ref|YP_003483343.1|	-	1.5e-05	24.5	87.0	0.0022	17.5	11.7	4.2	1	1	3	4	4	4	3	Domain	of	unknown	function	(DUF3552)
Fez1	PF06818.15	gi|289596647|ref|YP_003483343.1|	-	0.00033	21.2	62.8	0.01	16.3	23.5	3.1	1	1	2	3	3	3	2	Fez1
DUF4407	PF14362.6	gi|289596647|ref|YP_003483343.1|	-	0.0027	17.1	35.9	0.014	14.8	13.7	2.9	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4407)
DUF948	PF06103.11	gi|289596647|ref|YP_003483343.1|	-	0.0085	16.3	19.7	0.49	10.7	0.3	4.6	3	2	1	4	4	4	3	Bacterial	protein	of	unknown	function	(DUF948)
APG6_N	PF17675.1	gi|289596647|ref|YP_003483343.1|	-	0.0098	16.4	23.9	0.0098	16.4	23.9	4.6	1	1	3	4	4	4	1	Apg6	coiled-coil	region
DUF4200	PF13863.6	gi|289596647|ref|YP_003483343.1|	-	0.025	15.0	92.6	0.27	11.6	21.3	5.3	1	1	3	4	4	4	0	Domain	of	unknown	function	(DUF4200)
Spc7	PF08317.11	gi|289596647|ref|YP_003483343.1|	-	0.041	12.8	73.6	0.016	14.1	19.8	3.5	1	1	2	3	3	3	0	Spc7	kinetochore	protein
Shugoshin_N	PF07558.11	gi|289596647|ref|YP_003483343.1|	-	0.05	13.5	0.6	0.05	13.5	0.6	5.8	7	0	0	7	7	6	0	Shugoshin	N-terminal	coiled-coil	region
LXG	PF04740.12	gi|289596647|ref|YP_003483343.1|	-	0.064	12.9	38.2	0.28	10.8	16.2	4.3	2	1	1	3	3	3	0	LXG	domain	of	WXG	superfamily
Syntaxin_2	PF14523.6	gi|289596647|ref|YP_003483343.1|	-	0.089	13.2	47.5	1.3	9.5	3.1	4.4	1	1	3	4	4	4	0	Syntaxin-like	protein
BLOC1_2	PF10046.9	gi|289596647|ref|YP_003483343.1|	-	0.094	13.0	48.7	0.041	14.2	8.2	4.8	1	1	4	5	5	5	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
DUF3584	PF12128.8	gi|289596647|ref|YP_003483343.1|	-	0.14	9.6	58.0	0.27	8.7	26.6	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3584)
DUF16	PF01519.16	gi|289596647|ref|YP_003483343.1|	-	0.26	11.8	55.8	0.26	11.8	9.1	4.5	1	1	3	4	4	4	0	Protein	of	unknown	function	DUF16
DUF3450	PF11932.8	gi|289596647|ref|YP_003483343.1|	-	0.45	9.8	47.3	0.12	11.6	11.3	4.0	1	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3450)
ATG16	PF08614.11	gi|289596647|ref|YP_003483343.1|	-	0.46	10.7	66.1	0.024	14.9	20.6	4.0	1	1	3	4	4	3	0	Autophagy	protein	16	(ATG16)
Sec34	PF04136.15	gi|289596647|ref|YP_003483343.1|	-	0.61	10.0	40.4	0.12	12.2	5.0	4.2	2	1	1	4	4	4	0	Sec34-like	family
MAD	PF05557.13	gi|289596647|ref|YP_003483343.1|	-	0.86	7.9	69.6	0.97	7.7	35.6	2.3	1	1	2	3	3	3	0	Mitotic	checkpoint	protein
COG2	PF06148.11	gi|289596647|ref|YP_003483343.1|	-	1.3	9.1	44.0	1.2	9.2	4.5	5.0	1	1	4	5	5	5	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
OmpH	PF03938.14	gi|289596647|ref|YP_003483343.1|	-	1.6	9.1	68.4	5.5	7.3	17.5	4.7	1	1	2	3	3	3	0	Outer	membrane	protein	(OmpH-like)
UPF0242	PF06785.11	gi|289596647|ref|YP_003483343.1|	-	1.7	8.7	74.6	1.9	8.6	28.5	3.6	1	1	3	4	4	4	0	Uncharacterised	protein	family	(UPF0242)	N-terminus
APG17	PF04108.12	gi|289596647|ref|YP_003483343.1|	-	2.2	7.3	43.6	0.067	12.3	8.9	3.5	1	1	2	3	3	3	0	Autophagy	protein	Apg17
AAA_13	PF13166.6	gi|289596647|ref|YP_003483343.1|	-	2.3	6.8	59.7	6.8	5.2	13.4	2.8	1	1	1	2	2	2	0	AAA	domain
TMF_TATA_bd	PF12325.8	gi|289596647|ref|YP_003483343.1|	-	2.3	8.5	66.3	0.1	12.9	17.4	4.3	1	1	3	4	4	4	0	TATA	element	modulatory	factor	1	TATA	binding
DHR10	PF18595.1	gi|289596647|ref|YP_003483343.1|	-	3.5	7.7	71.9	1.5	8.9	15.4	5.3	1	1	4	5	5	5	0	Designed	helical	repeat	protein	10	domain
Prefoldin	PF02996.17	gi|289596647|ref|YP_003483343.1|	-	5.5	6.9	58.6	0.26	11.2	2.3	6.6	2	2	5	7	7	7	0	Prefoldin	subunit
HAUS-augmin3	PF14932.6	gi|289596647|ref|YP_003483343.1|	-	6.8	6.2	52.0	1.4	8.4	14.7	3.2	1	1	2	3	3	3	0	HAUS	augmin-like	complex	subunit	3
C9orf72-like	PF15019.6	gi|289596647|ref|YP_003483343.1|	-	6.9	6.1	12.9	0.61	9.6	2.9	2.6	2	1	0	3	3	3	0	C9orf72-like	protein	family
Baculo_PEP_C	PF04513.12	gi|289596648|ref|YP_003483344.1|	-	7.2e-05	22.8	6.8	0.012	15.7	5.4	2.1	1	1	1	2	2	2	2	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
NPV_P10	PF05531.12	gi|289596648|ref|YP_003483344.1|	-	0.00076	19.9	11.2	0.0084	16.5	5.2	2.2	1	1	1	2	2	2	1	Nucleopolyhedrovirus	P10	protein
Vip3A_N	PF12495.8	gi|289596648|ref|YP_003483344.1|	-	0.0017	18.3	6.6	0.011	15.6	1.1	2.1	1	1	1	2	2	2	1	Vegetative	insecticide	protein	3A	N	terminal
BLOC1_2	PF10046.9	gi|289596648|ref|YP_003483344.1|	-	0.0055	17.0	10.6	0.19	12.0	0.6	2.3	1	1	1	2	2	2	2	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Seryl_tRNA_N	PF02403.22	gi|289596648|ref|YP_003483344.1|	-	0.0061	16.8	10.1	0.013	15.7	3.3	2.1	1	1	1	2	2	2	1	Seryl-tRNA	synthetase	N-terminal	domain
AAA_13	PF13166.6	gi|289596648|ref|YP_003483344.1|	-	0.0066	15.1	5.3	0.0078	14.9	5.3	1.0	1	0	0	1	1	1	1	AAA	domain
Apolipoprotein	PF01442.18	gi|289596648|ref|YP_003483344.1|	-	0.017	15.0	0.6	0.033	14.1	0.6	1.5	1	1	0	1	1	1	0	Apolipoprotein	A1/A4/E	domain
Laminin_II	PF06009.12	gi|289596648|ref|YP_003483344.1|	-	0.02	14.9	7.6	0.029	14.4	7.2	1.4	1	1	0	1	1	1	0	Laminin	Domain	II
SKA2	PF16740.5	gi|289596648|ref|YP_003483344.1|	-	0.021	14.6	1.9	0.021	14.6	1.9	2.2	1	1	1	2	2	2	0	Spindle	and	kinetochore-associated	protein	2
DUF948	PF06103.11	gi|289596648|ref|YP_003483344.1|	-	0.028	14.7	4.9	0.33	11.2	2.5	2.3	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
LOH1CR12	PF10158.9	gi|289596648|ref|YP_003483344.1|	-	0.033	14.2	3.9	0.22	11.6	3.8	1.9	1	1	0	1	1	1	0	Tumour	suppressor	protein
DASH_Dam1	PF08653.10	gi|289596648|ref|YP_003483344.1|	-	0.034	13.9	5.9	0.49	10.2	0.2	3.4	1	1	1	3	3	3	0	DASH	complex	subunit	Dam1
PSII_Pbs27	PF13326.6	gi|289596648|ref|YP_003483344.1|	-	0.037	14.3	0.6	0.063	13.6	0.5	1.4	1	1	0	1	1	1	0	Photosystem	II	Pbs27
CREPT	PF16566.5	gi|289596648|ref|YP_003483344.1|	-	0.043	14.0	4.8	0.094	12.9	0.8	2.1	1	1	1	2	2	2	0	Cell-cycle	alteration	and	expression-elevated	protein	in	tumour
HD_3	PF13023.6	gi|289596648|ref|YP_003483344.1|	-	0.045	13.7	1.6	0.056	13.4	1.6	1.2	1	0	0	1	1	1	0	HD	domain
Sec34	PF04136.15	gi|289596648|ref|YP_003483344.1|	-	0.053	13.4	9.1	0.6	10.0	1.6	2.1	1	1	1	2	2	2	0	Sec34-like	family
TRPM_tetra	PF16519.5	gi|289596648|ref|YP_003483344.1|	-	0.056	13.6	1.5	0.056	13.6	1.5	2.4	2	1	0	2	2	2	0	Tetramerisation	domain	of	TRPM
FliG_M	PF14841.6	gi|289596648|ref|YP_003483344.1|	-	0.062	13.5	2.2	0.49	10.7	0.1	2.4	2	0	0	2	2	2	0	FliG	middle	domain
Noelin-1	PF12308.8	gi|289596648|ref|YP_003483344.1|	-	0.063	13.3	4.4	0.53	10.3	0.8	2.3	1	1	1	2	2	2	0	Neurogenesis	glycoprotein
Phage_Mu_Gam	PF07352.12	gi|289596648|ref|YP_003483344.1|	-	0.066	13.1	8.4	0.52	10.2	2.0	2.2	1	1	1	2	2	2	0	Bacteriophage	Mu	Gam	like	protein
COG2	PF06148.11	gi|289596648|ref|YP_003483344.1|	-	0.073	13.2	6.7	0.64	10.1	1.2	2.8	1	1	2	3	3	3	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
DUF1664	PF07889.12	gi|289596648|ref|YP_003483344.1|	-	0.08	13.0	8.1	1.1	9.3	2.5	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1664)
Nsp1_C	PF05064.13	gi|289596648|ref|YP_003483344.1|	-	0.083	12.7	6.6	0.63	9.9	1.8	2.2	1	1	1	2	2	2	0	Nsp1-like	C-terminal	region
TolA_bind_tri	PF16331.5	gi|289596648|ref|YP_003483344.1|	-	0.091	12.9	3.9	0.18	11.9	1.2	2.4	1	1	1	2	2	2	0	TolA	binding	protein	trimerisation
Matrilin_ccoil	PF10393.9	gi|289596648|ref|YP_003483344.1|	-	0.1	12.5	4.9	0.72	9.8	0.2	3.3	1	1	2	3	3	3	0	Trimeric	coiled-coil	oligomerisation	domain	of	matrilin
ABC_tran_CTD	PF16326.5	gi|289596648|ref|YP_003483344.1|	-	0.12	12.7	8.9	4.1	7.7	3.9	2.9	1	1	2	3	3	3	0	ABC	transporter	C-terminal	domain
LXG	PF04740.12	gi|289596648|ref|YP_003483344.1|	-	0.13	12.0	9.4	2.5	7.8	9.4	2.1	1	1	0	1	1	1	0	LXG	domain	of	WXG	superfamily
UPF0449	PF15136.6	gi|289596648|ref|YP_003483344.1|	-	0.13	12.7	6.5	0.13	12.8	0.6	2.1	1	1	1	2	2	2	0	Uncharacterised	protein	family	UPF0449
YkuI_C	PF10388.9	gi|289596648|ref|YP_003483344.1|	-	0.14	12.0	3.9	0.82	9.5	2.3	2.0	1	1	1	2	2	2	0	EAL-domain	associated	signalling	protein	domain
Baculo_p24	PF05073.12	gi|289596648|ref|YP_003483344.1|	-	0.14	11.9	6.5	0.41	10.4	6.4	1.7	1	1	0	1	1	1	0	Baculovirus	P24	capsid	protein
Exonuc_VII_L	PF02601.15	gi|289596648|ref|YP_003483344.1|	-	0.16	11.6	2.4	0.19	11.3	2.4	1.1	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
GCN5L1	PF06320.13	gi|289596648|ref|YP_003483344.1|	-	0.16	12.1	4.1	0.55	10.4	0.7	2.1	1	1	0	2	2	2	0	GCN5-like	protein	1	(GCN5L1)
Fib_alpha	PF08702.10	gi|289596648|ref|YP_003483344.1|	-	0.18	12.0	8.3	1.3	9.2	8.3	2.0	1	1	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
LMBR1	PF04791.16	gi|289596648|ref|YP_003483344.1|	-	0.19	10.6	2.9	0.2	10.6	2.9	1.0	1	0	0	1	1	1	0	LMBR1-like	membrane	protein
MCPsignal	PF00015.21	gi|289596648|ref|YP_003483344.1|	-	0.19	11.5	2.3	0.25	11.2	2.3	1.1	1	0	0	1	1	1	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
C9orf72-like	PF15019.6	gi|289596648|ref|YP_003483344.1|	-	0.19	11.2	3.0	1	8.9	2.8	1.9	1	1	1	2	2	2	0	C9orf72-like	protein	family
Snapin_Pallidin	PF14712.6	gi|289596648|ref|YP_003483344.1|	-	0.19	12.1	7.7	3.1	8.3	1.7	2.3	1	1	1	2	2	2	0	Snapin/Pallidin
Tup_N	PF08581.10	gi|289596648|ref|YP_003483344.1|	-	0.23	11.8	5.9	0.16	12.3	3.0	2.0	1	1	2	3	3	3	0	Tup	N-terminal
DUF4446	PF14584.6	gi|289596648|ref|YP_003483344.1|	-	0.24	11.4	6.6	1.9	8.5	0.3	2.1	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF4446)
Prominin	PF05478.11	gi|289596648|ref|YP_003483344.1|	-	0.25	9.3	5.8	0.42	8.5	5.8	1.4	1	1	0	1	1	1	0	Prominin
Phasin	PF05597.11	gi|289596648|ref|YP_003483344.1|	-	0.29	11.2	4.0	0.71	9.9	1.0	2.1	1	1	1	2	2	2	0	Poly(hydroxyalcanoate)	granule	associated	protein	(phasin)
Allexi_40kDa	PF05549.11	gi|289596648|ref|YP_003483344.1|	-	0.31	10.5	5.7	4.1	6.8	2.9	2.0	1	1	1	2	2	2	0	Allexivirus	40kDa	protein
ISG65-75	PF11727.8	gi|289596648|ref|YP_003483344.1|	-	0.33	10.2	2.0	0.42	9.8	2.0	1.1	1	0	0	1	1	1	0	Invariant	surface	glycoprotein
DUF16	PF01519.16	gi|289596648|ref|YP_003483344.1|	-	0.36	11.3	11.0	34	5.0	11.0	2.4	1	1	0	1	1	1	0	Protein	of	unknown	function	DUF16
DASH_Dad4	PF08650.10	gi|289596648|ref|YP_003483344.1|	-	0.36	10.8	3.3	6.2	6.9	0.8	2.4	2	1	0	2	2	2	0	DASH	complex	subunit	Dad4
YabA	PF06156.13	gi|289596648|ref|YP_003483344.1|	-	0.37	11.5	5.3	1.1	10.0	3.9	2.1	1	1	1	2	2	2	0	Initiation	control	protein	YabA
GP41	PF00517.17	gi|289596648|ref|YP_003483344.1|	-	0.41	10.5	3.8	0.57	10.1	1.0	2.0	1	1	1	2	2	2	0	Retroviral	envelope	protein
Tropomyosin	PF00261.20	gi|289596648|ref|YP_003483344.1|	-	0.45	9.8	10.0	0.65	9.3	1.1	2.1	1	1	0	2	2	2	0	Tropomyosin
BORCS7	PF16088.5	gi|289596648|ref|YP_003483344.1|	-	0.48	10.7	6.8	6.3	7.1	0.3	2.5	2	1	1	3	3	3	0	BLOC-1-related	complex	sub-unit	7
DivIC	PF04977.15	gi|289596648|ref|YP_003483344.1|	-	0.64	9.8	8.5	0.73	9.6	3.7	2.1	2	0	0	2	2	2	0	Septum	formation	initiator
FlaC_arch	PF05377.11	gi|289596648|ref|YP_003483344.1|	-	0.84	10.1	10.7	8.8	6.8	4.3	3.5	1	1	1	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
YojJ	PF10372.9	gi|289596648|ref|YP_003483344.1|	-	0.91	9.7	6.2	1.3	9.2	2.3	2.6	1	1	1	2	2	2	0	Bacterial	membrane-spanning	protein	N-terminus
CorA	PF01544.18	gi|289596648|ref|YP_003483344.1|	-	1	8.6	7.3	1.3	8.3	7.3	1.1	1	0	0	1	1	1	0	CorA-like	Mg2+	transporter	protein
BRE1	PF08647.11	gi|289596648|ref|YP_003483344.1|	-	1	9.5	9.9	1.4	9.1	5.3	2.3	1	1	1	2	2	2	0	BRE1	E3	ubiquitin	ligase
TMPIT	PF07851.13	gi|289596648|ref|YP_003483344.1|	-	1.1	8.4	4.5	1.7	7.8	4.5	1.5	1	1	0	1	1	1	0	TMPIT-like	protein
Lectin_N	PF03954.14	gi|289596648|ref|YP_003483344.1|	-	2	8.2	6.2	4.6	7.0	1.1	2.0	1	1	1	2	2	2	0	Hepatic	lectin,	N-terminal	domain
PCRF	PF03462.18	gi|289596648|ref|YP_003483344.1|	-	2.2	8.1	5.3	6.3	6.6	5.3	1.7	1	1	0	1	1	1	0	PCRF	domain
YtxH	PF12732.7	gi|289596648|ref|YP_003483344.1|	-	2.3	8.8	5.3	27	5.4	3.1	2.8	1	1	1	2	2	2	0	YtxH-like	protein
Lipoprotein_20	PF13942.6	gi|289596648|ref|YP_003483344.1|	-	2.4	8.1	8.2	2.2	8.2	0.6	2.2	1	1	1	2	2	2	0	YfhG	lipoprotein
Fzo_mitofusin	PF04799.13	gi|289596648|ref|YP_003483344.1|	-	3.8	7.0	6.4	44	3.6	5.8	2.1	1	1	0	1	1	1	0	fzo-like	conserved	region
DUF4795	PF16043.5	gi|289596648|ref|YP_003483344.1|	-	4.5	6.8	11.4	15	5.1	11.4	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4795)
APG6_N	PF17675.1	gi|289596648|ref|YP_003483344.1|	-	5.4	7.6	8.9	33	5.0	8.8	1.9	1	1	0	1	1	1	0	Apg6	coiled-coil	region
Cauli_DNA-bind	PF03310.13	gi|289596648|ref|YP_003483344.1|	-	6.9	6.8	8.2	66	3.6	8.1	2.1	1	1	0	1	1	1	0	Caulimovirus	DNA-binding	protein
XhlA	PF10779.9	gi|289596648|ref|YP_003483344.1|	-	8.6	6.6	14.7	24	5.2	6.3	2.9	1	1	1	2	2	2	0	Haemolysin	XhlA
Asparaginase_2	PF01112.18	gi|289596649|ref|YP_003483345.1|	-	6.2e-62	209.4	0.0	7.8e-62	209.0	0.0	1.1	1	0	0	1	1	1	1	Asparaginase
Fer4_8	PF13183.6	gi|289596650|ref|YP_003483346.1|	-	9e-08	32.5	18.0	1.2e-06	28.8	7.9	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|289596650|ref|YP_003483346.1|	-	1.6e-07	31.8	18.2	1.9e-05	25.1	8.4	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|289596650|ref|YP_003483346.1|	-	1.8e-07	31.2	5.5	3.1e-07	30.4	5.5	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|289596650|ref|YP_003483346.1|	-	8.2e-05	23.5	1.9	0.13	13.2	0.2	2.3	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_10	PF13237.6	gi|289596650|ref|YP_003483346.1|	-	0.00053	20.0	11.7	0.0054	16.8	12.7	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|289596650|ref|YP_003483346.1|	-	0.00093	19.7	9.9	0.0039	17.7	10.2	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|289596650|ref|YP_003483346.1|	-	0.0035	18.2	4.1	0.14	13.0	0.3	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|289596650|ref|YP_003483346.1|	-	0.015	15.5	2.9	2.5	8.4	0.3	2.1	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_20	PF14691.6	gi|289596650|ref|YP_003483346.1|	-	0.082	12.7	5.8	0.25	11.1	0.1	2.1	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_21	PF14697.6	gi|289596650|ref|YP_003483346.1|	-	0.3	11.2	11.5	0.71	10.0	1.5	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|289596650|ref|YP_003483346.1|	-	0.5	10.6	14.9	0.49	10.6	2.6	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|289596650|ref|YP_003483346.1|	-	1.6	9.0	11.8	0.87	9.8	1.9	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|289596650|ref|YP_003483346.1|	-	4.8	7.9	11.0	0.44	11.2	1.6	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
CCG	PF02754.16	gi|289596651|ref|YP_003483347.1|	-	2.4e-24	85.3	0.2	1.6e-13	50.7	0.0	2.2	2	0	0	2	2	2	2	Cysteine-rich	domain
Pyr_redox_2	PF07992.14	gi|289596652|ref|YP_003483348.1|	-	1.7e-56	191.7	5.3	3.2e-40	138.2	1.8	3.4	4	0	0	4	4	3	3	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|289596652|ref|YP_003483348.1|	-	9.3e-24	84.2	6.8	3.9e-15	55.9	0.1	4.4	4	1	0	4	4	4	3	Pyridine	nucleotide-disulphide	oxidoreductase
Fer4_20	PF14691.6	gi|289596652|ref|YP_003483348.1|	-	9.7e-20	70.4	1.3	2.8e-16	59.3	0.0	5.0	4	1	1	5	5	5	2	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
NAD_binding_8	PF13450.6	gi|289596652|ref|YP_003483348.1|	-	5.3e-17	61.8	1.3	1.6e-08	34.7	0.0	3.2	3	0	0	3	3	3	2	NAD(P)-binding	Rossmann-like	domain
AlaDh_PNT_C	PF01262.21	gi|289596652|ref|YP_003483348.1|	-	4.6e-16	58.8	0.8	7.1e-05	22.2	0.0	3.5	3	0	0	3	3	3	3	Alanine	dehydrogenase/PNT,	C-terminal	domain
Fer4	PF00037.27	gi|289596652|ref|YP_003483348.1|	-	8.6e-16	57.0	48.2	4.3e-07	29.5	4.8	5.8	4	1	1	5	5	5	4	4Fe-4S	binding	domain
Pyr_redox	PF00070.27	gi|289596652|ref|YP_003483348.1|	-	2.1e-15	57.0	12.1	0.00011	22.7	0.1	5.0	4	1	0	4	4	4	3	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_oxidored	PF12831.7	gi|289596652|ref|YP_003483348.1|	-	4.9e-15	55.8	9.6	8.3e-07	28.7	0.5	4.1	5	0	0	5	5	5	3	FAD	dependent	oxidoreductase
GIDA	PF01134.22	gi|289596652|ref|YP_003483348.1|	-	1e-14	54.5	9.8	0.00072	18.7	0.0	5.6	6	0	0	6	6	6	4	Glucose	inhibited	division	protein	A
FAD_binding_2	PF00890.24	gi|289596652|ref|YP_003483348.1|	-	1.8e-13	50.4	14.0	3.9e-07	29.5	0.7	3.7	4	0	0	4	4	4	2	FAD	binding	domain
NAD_binding_7	PF13241.6	gi|289596652|ref|YP_003483348.1|	-	3.8e-13	49.8	0.7	0.00071	20.0	0.1	4.5	4	0	0	4	4	4	3	Putative	NAD(P)-binding
Fer4_21	PF14697.6	gi|289596652|ref|YP_003483348.1|	-	1.2e-10	41.3	33.2	5e-07	29.7	11.7	4.5	3	1	0	3	3	3	2	4Fe-4S	dicluster	domain
HI0933_like	PF03486.14	gi|289596652|ref|YP_003483348.1|	-	3e-10	39.4	10.3	2.6e-06	26.4	1.0	3.5	3	0	0	3	3	3	2	HI0933-like	protein
Fer4_9	PF13187.6	gi|289596652|ref|YP_003483348.1|	-	3.4e-10	39.9	41.6	4.3e-06	26.8	12.0	5.4	4	2	1	5	5	5	3	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|289596652|ref|YP_003483348.1|	-	4.1e-10	40.1	48.5	3.5e-06	27.5	13.1	6.1	5	2	2	7	7	5	3	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|289596652|ref|YP_003483348.1|	-	2.6e-09	37.0	42.3	7.1e-05	22.8	0.4	5.6	4	2	1	5	5	5	3	4Fe-4S	dicluster	domain
DAO	PF01266.24	gi|289596652|ref|YP_003483348.1|	-	3.1e-09	36.9	14.8	0.00022	21.0	0.4	4.5	5	1	0	5	5	4	2	FAD	dependent	oxidoreductase
FAD_binding_3	PF01494.19	gi|289596652|ref|YP_003483348.1|	-	3.5e-08	33.1	7.0	0.0014	18.0	0.8	3.0	4	0	0	4	4	3	2	FAD	binding	domain
Fer4_22	PF17179.4	gi|289596652|ref|YP_003483348.1|	-	9.4e-08	32.8	20.8	0.02	15.8	0.2	5.0	4	1	0	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|289596652|ref|YP_003483348.1|	-	3.3e-07	31.2	39.5	0.033	15.1	1.4	6.3	5	2	2	7	7	7	5	4Fe-4S	double	cluster	binding	domain
Thi4	PF01946.17	gi|289596652|ref|YP_003483348.1|	-	4.4e-07	29.4	1.4	0.037	13.3	0.0	3.2	3	0	0	3	3	3	2	Thi4	family
2-Hacid_dh_C	PF02826.19	gi|289596652|ref|YP_003483348.1|	-	4.7e-07	29.3	1.0	0.0033	16.8	0.2	3.4	3	0	0	3	3	3	2	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Fer4_17	PF13534.6	gi|289596652|ref|YP_003483348.1|	-	1.6e-06	28.6	34.8	0.0027	18.2	0.5	6.4	7	1	0	7	7	5	3	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|289596652|ref|YP_003483348.1|	-	2.8e-06	27.1	21.7	6.3e-05	22.9	2.1	6.9	7	1	0	7	7	5	3	4Fe-4S	binding	domain
Amino_oxidase	PF01593.24	gi|289596652|ref|YP_003483348.1|	-	5.5e-06	25.9	1.5	0.094	12.0	0.1	3.2	3	0	0	3	3	3	2	Flavin	containing	amine	oxidoreductase
FMO-like	PF00743.19	gi|289596652|ref|YP_003483348.1|	-	6.2e-06	24.9	0.2	0.27	9.6	0.0	3.9	4	0	0	4	4	4	1	Flavin-binding	monooxygenase-like
IlvN	PF07991.12	gi|289596652|ref|YP_003483348.1|	-	8.4e-06	25.5	4.2	0.037	13.6	0.0	3.8	4	0	0	4	4	3	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
K_oxygenase	PF13434.6	gi|289596652|ref|YP_003483348.1|	-	9.4e-06	25.0	4.5	0.0019	17.4	0.0	4.4	5	0	0	5	5	5	1	L-lysine	6-monooxygenase	(NADPH-requiring)
Fer4_2	PF12797.7	gi|289596652|ref|YP_003483348.1|	-	9.6e-06	25.4	12.8	4e-05	23.4	2.3	6.7	6	1	0	6	6	5	3	4Fe-4S	binding	domain
Glyco_hydro_3_C	PF01915.22	gi|289596652|ref|YP_003483348.1|	-	1.6e-05	24.9	0.3	0.015	15.3	0.1	2.4	2	0	0	2	2	2	2	Glycosyl	hydrolase	family	3	C-terminal	domain
Shikimate_DH	PF01488.20	gi|289596652|ref|YP_003483348.1|	-	1.6e-05	25.0	1.6	3.6	7.7	0.0	4.4	4	0	0	4	4	4	1	Shikimate	/	quinate	5-dehydrogenase
Fer4_15	PF13459.6	gi|289596652|ref|YP_003483348.1|	-	0.00081	20.1	0.5	0.00081	20.1	0.5	5.1	3	1	1	4	4	4	1	4Fe-4S	single	cluster	domain
NAD_binding_9	PF13454.6	gi|289596652|ref|YP_003483348.1|	-	0.0013	18.7	4.0	5.3	7.0	0.0	4.3	4	0	0	4	4	4	0	FAD-NAD(P)-binding
Trp_halogenase	PF04820.14	gi|289596652|ref|YP_003483348.1|	-	0.0023	16.8	6.9	0.3	9.9	0.0	3.5	3	0	0	3	3	3	1	Tryptophan	halogenase
Lycopene_cycl	PF05834.12	gi|289596652|ref|YP_003483348.1|	-	0.0023	17.0	3.8	0.45	9.5	0.2	2.6	3	0	0	3	3	2	2	Lycopene	cyclase	protein
XdhC_C	PF13478.6	gi|289596652|ref|YP_003483348.1|	-	0.0081	16.7	0.1	6.8	7.2	0.0	3.2	3	0	0	3	3	3	0	XdhC	Rossmann	domain
Fer4_8	PF13183.6	gi|289596652|ref|YP_003483348.1|	-	0.0092	16.4	42.8	0.079	13.4	4.0	5.9	3	3	3	6	6	6	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|289596652|ref|YP_003483348.1|	-	0.0093	16.4	1.5	0.0093	16.4	1.5	7.3	7	1	0	7	7	6	1	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|289596652|ref|YP_003483348.1|	-	0.023	15.2	0.8	0.023	15.2	0.8	4.8	4	0	0	4	4	3	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
NAD_binding_2	PF03446.15	gi|289596652|ref|YP_003483348.1|	-	0.026	14.7	3.7	0.68	10.1	0.0	3.1	4	0	0	4	4	2	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
3HCDH_N	PF02737.18	gi|289596652|ref|YP_003483348.1|	-	0.027	14.3	6.4	0.69	9.8	0.3	2.9	3	0	0	3	3	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
ThiF	PF00899.21	gi|289596652|ref|YP_003483348.1|	-	0.032	13.6	0.3	2.2	7.6	0.0	2.9	3	0	0	3	3	2	0	ThiF	family
ApbA	PF02558.16	gi|289596652|ref|YP_003483348.1|	-	0.054	13.1	2.7	0.17	11.5	0.1	2.4	2	0	0	2	2	2	0	Ketopantoate	reductase	PanE/ApbA
PALP	PF00291.25	gi|289596652|ref|YP_003483348.1|	-	0.063	12.7	2.5	0.95	8.8	0.4	3.0	2	1	1	3	3	3	0	Pyridoxal-phosphate	dependent	enzyme
TrkA_N	PF02254.18	gi|289596652|ref|YP_003483348.1|	-	0.13	12.5	2.5	12	6.1	0.0	3.0	3	0	0	3	3	2	0	TrkA-N	domain
ELFV_dehydrog	PF00208.21	gi|289596652|ref|YP_003483348.1|	-	0.17	11.6	2.0	22	4.7	0.1	3.3	4	0	0	4	4	3	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
Fer4_18	PF13746.6	gi|289596652|ref|YP_003483348.1|	-	5.3	7.3	21.1	1.6	8.9	0.2	4.3	3	1	1	4	4	3	0	4Fe-4S	dicluster	domain
Pyr_redox_2	PF07992.14	gi|289596653|ref|YP_003483349.1|	-	5.7e-16	58.6	1.3	1.5e-05	24.4	0.0	3.3	3	0	0	3	3	3	3	Pyridine	nucleotide-disulphide	oxidoreductase
Fer4	PF00037.27	gi|289596653|ref|YP_003483349.1|	-	8.7e-14	50.7	30.8	5.4e-05	22.8	4.3	4.4	4	0	0	4	4	4	4	4Fe-4S	binding	domain
Fer4_7	PF12838.7	gi|289596653|ref|YP_003483349.1|	-	9.9e-14	51.7	21.9	3.5e-08	33.9	12.0	3.5	3	0	0	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|289596653|ref|YP_003483349.1|	-	6.8e-10	38.9	21.5	4.2e-06	26.8	9.6	3.3	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|289596653|ref|YP_003483349.1|	-	1.5e-09	37.8	23.3	7e-07	29.3	10.9	2.9	2	1	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|289596653|ref|YP_003483349.1|	-	6.4e-09	36.6	17.0	0.094	13.7	0.2	4.5	4	0	0	4	4	4	4	4Fe-4S	double	cluster	binding	domain
Fer4_10	PF13237.6	gi|289596653|ref|YP_003483349.1|	-	1.2e-07	31.8	23.2	3.2e-05	23.9	11.2	3.4	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|289596653|ref|YP_003483349.1|	-	5.6e-06	26.2	32.8	0.0025	17.8	3.8	4.3	4	0	0	4	4	4	2	4Fe-4S	binding	domain
Pyr_redox_3	PF13738.6	gi|289596653|ref|YP_003483349.1|	-	0.00019	20.8	0.0	5	6.3	0.0	3.9	3	1	1	4	4	4	1	Pyridine	nucleotide-disulphide	oxidoreductase
Fer4_17	PF13534.6	gi|289596653|ref|YP_003483349.1|	-	0.0002	21.8	19.9	0.13	12.8	10.7	4.1	3	1	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.7	gi|289596653|ref|YP_003483349.1|	-	0.00054	19.9	31.7	0.023	14.8	3.2	4.4	4	0	0	4	4	4	2	4Fe-4S	binding	domain
DAO	PF01266.24	gi|289596653|ref|YP_003483349.1|	-	0.00096	18.8	0.0	0.0019	17.8	0.0	1.6	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Fer4_22	PF17179.4	gi|289596653|ref|YP_003483349.1|	-	0.00098	19.9	15.5	0.52	11.2	0.7	3.5	3	0	0	3	3	3	3	4Fe-4S	dicluster	domain
FAD_binding_2	PF00890.24	gi|289596653|ref|YP_003483349.1|	-	0.003	16.7	0.0	0.38	9.8	0.0	2.6	2	0	0	2	2	2	1	FAD	binding	domain
FAD_binding_3	PF01494.19	gi|289596653|ref|YP_003483349.1|	-	0.054	12.7	0.0	3.9	6.6	0.1	2.4	2	0	0	2	2	2	0	FAD	binding	domain
GIDA	PF01134.22	gi|289596653|ref|YP_003483349.1|	-	0.13	11.3	0.3	19	4.2	0.0	3.1	3	0	0	3	3	3	0	Glucose	inhibited	division	protein	A
Fer4_4	PF12800.7	gi|289596653|ref|YP_003483349.1|	-	0.17	12.4	32.5	0.057	13.9	3.1	4.2	4	0	0	4	4	4	0	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|289596653|ref|YP_003483349.1|	-	0.19	12.2	27.1	0.86	10.1	3.3	4.1	2	2	1	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.7	gi|289596653|ref|YP_003483349.1|	-	1.1	10.4	40.4	1	10.4	8.9	4.5	4	0	0	4	4	4	0	4Fe-4S	binding	domain
Fer4_13	PF13370.6	gi|289596653|ref|YP_003483349.1|	-	1.1	9.8	25.6	8.1	7.1	3.3	4.6	4	0	0	4	4	4	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
FlpD	PF02662.16	gi|289596654|ref|YP_003483350.1|	-	7.7e-48	161.6	0.0	8.8e-48	161.4	0.0	1.0	1	0	0	1	1	1	1	Methyl-viologen-reducing	hydrogenase,	delta	subunit
Fer4_10	PF13237.6	gi|289596655|ref|YP_003483351.1|	-	1.5e-07	31.4	11.6	0.00024	21.2	0.1	3.3	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.6	gi|289596655|ref|YP_003483351.1|	-	6.6e-05	23.3	24.2	0.00027	21.3	14.4	2.5	2	1	2	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_22	PF17179.4	gi|289596655|ref|YP_003483351.1|	-	7.2e-05	23.6	14.8	0.035	14.9	5.1	2.7	3	0	0	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|289596655|ref|YP_003483351.1|	-	0.00074	19.6	15.4	0.0026	17.9	0.5	3.3	3	0	0	3	3	3	1	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|289596655|ref|YP_003483351.1|	-	0.00077	19.2	4.2	0.00077	19.2	4.2	3.1	4	0	0	4	4	4	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|289596655|ref|YP_003483351.1|	-	0.0011	18.9	1.7	0.0011	18.9	1.7	3.1	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_9	PF13187.6	gi|289596655|ref|YP_003483351.1|	-	0.0025	18.0	18.0	0.0042	17.2	14.8	2.9	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|289596655|ref|YP_003483351.1|	-	0.0039	17.7	19.8	0.0083	16.6	16.5	2.9	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|289596655|ref|YP_003483351.1|	-	0.0085	17.0	16.5	0.04	14.9	12.8	3.2	2	1	1	3	3	3	1	4Fe-4S	double	cluster	binding	domain
Fer4_7	PF12838.7	gi|289596655|ref|YP_003483351.1|	-	0.0086	16.6	19.5	0.042	14.4	17.1	2.8	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|289596655|ref|YP_003483351.1|	-	0.063	13.8	2.1	0.063	13.8	2.1	3.5	3	1	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_3	PF12798.7	gi|289596655|ref|YP_003483351.1|	-	0.087	13.8	5.5	0.087	13.8	5.5	2.9	3	0	0	3	3	2	0	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|289596655|ref|YP_003483351.1|	-	0.1	12.8	6.3	1.8	8.8	0.1	2.6	3	0	0	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.6	gi|289596655|ref|YP_003483351.1|	-	0.54	10.8	15.2	5.2	7.7	2.7	2.9	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_9	PF13187.6	gi|289596656|ref|YP_003483352.1|	-	1.2e-09	38.2	7.3	1.6e-09	37.8	4.1	2.4	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|289596656|ref|YP_003483352.1|	-	2.5e-09	37.5	10.5	0.00078	19.9	5.6	2.7	2	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.6	gi|289596656|ref|YP_003483352.1|	-	4.1e-08	33.2	18.5	9.6e-07	28.8	10.2	2.8	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|289596656|ref|YP_003483352.1|	-	9.1e-06	26.2	12.2	3.2e-05	24.4	8.8	2.7	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer2_4	PF13510.6	gi|289596656|ref|YP_003483352.1|	-	2.2e-05	24.4	0.1	6e-05	23.0	0.1	1.7	1	1	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_2	PF12797.7	gi|289596656|ref|YP_003483352.1|	-	3.3e-05	23.7	19.9	0.0018	18.2	3.0	3.4	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4	PF00037.27	gi|289596656|ref|YP_003483352.1|	-	5.3e-05	22.9	20.4	0.015	15.1	1.8	3.4	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_8	PF13183.6	gi|289596656|ref|YP_003483352.1|	-	5.6e-05	23.5	13.7	0.0012	19.3	11.5	2.6	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer2	PF00111.27	gi|289596656|ref|YP_003483352.1|	-	7e-05	22.7	0.0	7e-05	22.7	0.0	2.7	3	0	0	3	3	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_18	PF13746.6	gi|289596656|ref|YP_003483352.1|	-	0.00081	19.6	8.2	0.078	13.2	1.2	2.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_20	PF14691.6	gi|289596656|ref|YP_003483352.1|	-	0.0017	18.1	7.8	0.012	15.4	7.2	2.3	2	1	1	3	3	3	1	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_21	PF14697.6	gi|289596656|ref|YP_003483352.1|	-	0.0021	18.2	11.8	0.0021	18.2	11.8	2.3	2	1	0	2	2	1	1	4Fe-4S	dicluster	domain
Fer2_3	PF13085.6	gi|289596656|ref|YP_003483352.1|	-	0.0054	16.7	0.2	0.015	15.3	0.0	1.9	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_4	PF12800.7	gi|289596656|ref|YP_003483352.1|	-	0.019	15.4	18.4	0.13	12.9	4.7	3.1	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_6	PF12837.7	gi|289596656|ref|YP_003483352.1|	-	0.028	14.5	2.5	0.028	14.5	2.5	3.2	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|289596656|ref|YP_003483352.1|	-	0.11	13.5	18.0	0.4	11.6	3.0	3.3	3	1	0	3	3	3	0	4Fe-4S	double	cluster	binding	domain
Fer4_13	PF13370.6	gi|289596656|ref|YP_003483352.1|	-	0.31	11.6	11.5	1.4	9.6	2.1	2.8	3	0	0	3	3	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_22	PF17179.4	gi|289596656|ref|YP_003483352.1|	-	1.3	9.9	16.5	2.5	9.0	1.7	2.8	2	2	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|289596656|ref|YP_003483352.1|	-	1.8	9.4	6.6	5.9	7.7	0.0	3.0	3	0	0	3	3	3	0	4Fe-4S	single	cluster	domain
Fer4_3	PF12798.7	gi|289596656|ref|YP_003483352.1|	-	7.6	7.7	26.4	0.9	10.6	3.4	3.4	3	0	0	3	3	3	0	4Fe-4S	binding	domain
c-SKI_SMAD_bind	PF08782.10	gi|289596656|ref|YP_003483352.1|	-	9.8	6.5	8.7	15	5.9	0.6	2.5	1	1	0	2	2	2	0	c-SKI	Smad4	binding	domain
FAD_binding_2	PF00890.24	gi|289596657|ref|YP_003483353.1|	-	2.5e-69	234.4	1.0	3e-69	234.1	1.0	1.1	1	0	0	1	1	1	1	FAD	binding	domain
DAO	PF01266.24	gi|289596657|ref|YP_003483353.1|	-	0.0005	19.8	3.3	0.031	13.9	3.1	2.3	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.14	gi|289596657|ref|YP_003483353.1|	-	0.0034	16.7	0.2	0.027	13.7	0.2	2.3	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.22	gi|289596657|ref|YP_003483353.1|	-	0.0079	15.3	1.2	0.28	10.2	1.0	2.2	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.14	gi|289596657|ref|YP_003483353.1|	-	0.012	14.3	0.5	0.063	12.0	0.5	2.0	1	1	0	1	1	1	0	HI0933-like	protein
FAD_binding_3	PF01494.19	gi|289596657|ref|YP_003483353.1|	-	0.028	13.7	0.3	0.4	9.9	0.2	2.1	2	0	0	2	2	2	0	FAD	binding	domain
FAD_oxidored	PF12831.7	gi|289596657|ref|YP_003483353.1|	-	0.27	10.5	3.8	0.54	9.6	2.5	2.3	2	1	0	2	2	2	0	FAD	dependent	oxidoreductase
CCG	PF02754.16	gi|289596658|ref|YP_003483354.1|	-	3.2e-09	36.9	0.0	0.006	16.8	0.0	3.1	3	0	0	3	3	3	2	Cysteine-rich	domain
LUD_dom	PF02589.15	gi|289596659|ref|YP_003483355.1|	-	1.1e-52	178.5	0.7	1.4e-52	178.1	0.1	1.5	2	0	0	2	2	2	1	LUD	domain
Fer4_8	PF13183.6	gi|289596659|ref|YP_003483355.1|	-	7.4e-10	39.1	1.3	7.4e-10	39.1	1.3	1.8	2	0	0	2	2	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.6	gi|289596659|ref|YP_003483355.1|	-	3.2e-08	34.0	2.1	7.1e-08	32.9	2.1	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_20	PF14691.6	gi|289596659|ref|YP_003483355.1|	-	2.3e-05	24.1	6.5	0.0013	18.5	0.5	3.3	2	1	0	3	3	3	2	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_10	PF13237.6	gi|289596659|ref|YP_003483355.1|	-	3e-05	24.0	12.0	0.004	17.2	1.7	2.9	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|289596659|ref|YP_003483355.1|	-	0.00048	20.2	8.0	0.009	16.2	9.2	2.2	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|289596659|ref|YP_003483355.1|	-	0.00059	20.4	8.6	0.0094	16.5	9.7	2.3	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|289596659|ref|YP_003483355.1|	-	0.00073	19.2	13.2	0.1	12.5	3.6	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.6	gi|289596659|ref|YP_003483355.1|	-	0.0015	18.8	1.1	0.1	12.8	0.3	2.5	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|289596659|ref|YP_003483355.1|	-	0.002	19.1	7.3	0.15	13.0	0.3	2.9	3	0	0	3	3	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.7	gi|289596659|ref|YP_003483355.1|	-	0.0056	16.7	12.6	0.22	11.7	1.9	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.7	gi|289596659|ref|YP_003483355.1|	-	0.006	17.0	10.9	0.24	12.0	1.3	2.6	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_22	PF17179.4	gi|289596659|ref|YP_003483355.1|	-	0.059	14.2	6.6	0.84	10.5	0.3	2.7	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|289596659|ref|YP_003483355.1|	-	0.4	10.9	11.7	9.1	6.5	1.6	2.4	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|289596659|ref|YP_003483355.1|	-	6.8	7.0	14.6	6.9	6.9	3.1	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
malic	PF00390.19	gi|289596660|ref|YP_003483356.1|	-	1.2e-34	119.7	0.0	3.8e-25	88.8	0.0	2.7	2	1	1	3	3	3	2	Malic	enzyme,	N-terminal	domain
Malic_M	PF03949.15	gi|289596660|ref|YP_003483356.1|	-	3.5e-22	78.9	2.4	1.1e-10	41.2	0.0	3.1	2	1	0	2	2	2	2	Malic	enzyme,	NAD	binding	domain
ATP-grasp_2	PF08442.10	gi|289596661|ref|YP_003483357.1|	-	1e-63	214.5	0.3	2.7e-63	213.2	0.1	1.7	2	0	0	2	2	2	1	ATP-grasp	domain
Ligase_CoA	PF00549.19	gi|289596661|ref|YP_003483357.1|	-	4.1e-10	39.7	0.1	8.2e-10	38.7	0.1	1.5	1	0	0	1	1	1	1	CoA-ligase
GARS_A	PF01071.19	gi|289596661|ref|YP_003483357.1|	-	1.2e-07	31.7	0.2	3.7e-07	30.1	0.0	1.9	2	0	0	2	2	2	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATP-grasp_5	PF13549.6	gi|289596661|ref|YP_003483357.1|	-	2.4e-07	30.5	0.2	1.2e-06	28.2	0.2	2.0	1	1	0	1	1	1	1	ATP-grasp	domain
CPSase_L_D2	PF02786.17	gi|289596661|ref|YP_003483357.1|	-	0.057	12.9	0.0	0.12	11.8	0.0	1.5	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
CoA_binding	PF02629.19	gi|289596662|ref|YP_003483358.1|	-	2.1e-23	82.8	5.1	1.3e-22	80.3	1.3	2.4	2	0	0	2	2	2	1	CoA	binding	domain
Ligase_CoA	PF00549.19	gi|289596662|ref|YP_003483358.1|	-	5.3e-19	68.5	0.4	9.1e-19	67.8	0.4	1.3	1	0	0	1	1	1	1	CoA-ligase
Succ_CoA_lig	PF13607.6	gi|289596662|ref|YP_003483358.1|	-	7.3e-12	45.3	0.0	1.2e-11	44.6	0.0	1.3	1	0	0	1	1	1	1	Succinyl-CoA	ligase	like	flavodoxin	domain
TrmO	PF01980.16	gi|289596664|ref|YP_003483360.1|	-	1.3e-40	138.4	0.0	1.5e-40	138.1	0.0	1.1	1	0	0	1	1	1	1	tRNA-methyltransferase	O
Fumerase	PF05681.14	gi|289596665|ref|YP_003483361.1|	-	1.2e-96	323.3	0.0	1.3e-96	323.2	0.0	1.0	1	0	0	1	1	1	1	Fumarate	hydratase	(Fumerase)
UBA_2	PF08587.11	gi|289596665|ref|YP_003483361.1|	-	0.027	14.6	0.5	1	9.5	0.5	2.5	2	0	0	2	2	2	0	Ubiquitin	associated	domain	(UBA)
Frankia_peptide	PF14407.6	gi|289596665|ref|YP_003483361.1|	-	0.092	12.7	0.4	0.21	11.6	0.4	1.6	1	0	0	1	1	1	0	Ribosomally	synthesized	peptide	prototyped	by	Frankia	Franean1_4349.
PP2C_C	PF07830.13	gi|289596665|ref|YP_003483361.1|	-	3.3	8.2	5.1	8.4	6.9	0.0	3.2	4	0	0	4	4	4	0	Protein	serine/threonine	phosphatase	2C,	C-terminal	domain
Fumerase_C	PF05683.12	gi|289596666|ref|YP_003483362.1|	-	2.2e-44	151.3	0.3	2.7e-44	151.0	0.3	1.0	1	0	0	1	1	1	1	Fumarase	C-terminus
MFS_1	PF07690.16	gi|289596667|ref|YP_003483363.1|	-	7e-52	176.5	43.7	7e-52	176.5	43.7	2.0	2	1	0	2	2	2	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.24	gi|289596667|ref|YP_003483363.1|	-	1.5e-14	53.8	9.1	1.5e-14	53.8	9.1	2.3	2	0	0	2	2	2	1	Sugar	(and	other)	transporter
OATP	PF03137.20	gi|289596667|ref|YP_003483363.1|	-	0.0012	17.2	13.4	0.09	11.0	0.9	3.3	2	1	1	3	3	3	3	Organic	Anion	Transporter	Polypeptide	(OATP)	family
DUF4564	PF15169.6	gi|289596667|ref|YP_003483363.1|	-	0.032	14.0	0.4	0.075	12.8	0.4	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4564)
OAD_gamma	PF04277.13	gi|289596667|ref|YP_003483363.1|	-	0.37	11.4	4.3	0.74	10.5	0.0	3.7	3	0	0	3	3	3	0	Oxaloacetate	decarboxylase,	gamma	chain
MFS_2	PF13347.6	gi|289596667|ref|YP_003483363.1|	-	7.8	4.9	50.1	0.46	9.0	7.8	3.8	2	2	2	4	4	4	0	MFS/sugar	transport	protein
MFS_3	PF05977.13	gi|289596667|ref|YP_003483363.1|	-	8.5	4.6	21.2	0.27	9.6	6.6	2.8	2	1	0	2	2	2	0	Transmembrane	secretion	effector
Phage_integrase	PF00589.22	gi|289596668|ref|YP_003483364.1|	-	7.8e-24	84.4	0.8	1.5e-23	83.5	0.6	1.5	2	0	0	2	2	2	1	Phage	integrase	family
Phage_int_SAM_1	PF02899.17	gi|289596668|ref|YP_003483364.1|	-	1.2e-07	31.9	0.3	7.1e-07	29.4	0.0	2.4	3	0	0	3	3	3	1	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_5	PF13102.6	gi|289596668|ref|YP_003483364.1|	-	0.012	15.9	0.1	0.012	15.9	0.1	3.7	2	2	2	4	4	4	0	Phage	integrase	SAM-like	domain
Mad3_BUB1_I_2	PF17014.5	gi|289596668|ref|YP_003483364.1|	-	0.069	13.3	3.2	0.82	9.8	0.8	2.7	2	0	0	2	2	2	0	Putative	Mad3/BUB1	like	region	1	protein
DUF4298	PF14131.6	gi|289596668|ref|YP_003483364.1|	-	0.65	10.0	6.0	3.6	7.6	0.2	3.2	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4298)
zf-BED	PF02892.15	gi|289596669|ref|YP_003483365.1|	-	0.00032	20.6	1.4	0.00058	19.8	1.4	1.4	1	0	0	1	1	1	1	BED	zinc	finger
Desulfoferrod_N	PF06397.12	gi|289596669|ref|YP_003483365.1|	-	0.013	15.1	0.3	0.018	14.6	0.3	1.2	1	0	0	1	1	1	0	Desulfoferrodoxin,	N-terminal	domain
zf-C2H2_4	PF13894.6	gi|289596669|ref|YP_003483365.1|	-	0.015	16.1	3.5	0.029	15.2	3.5	1.5	1	0	0	1	1	1	0	C2H2-type	zinc	finger
CoaE	PF01121.20	gi|289596669|ref|YP_003483365.1|	-	0.043	13.5	0.0	0.05	13.3	0.0	1.0	1	0	0	1	1	1	0	Dephospho-CoA	kinase
PyrI_C	PF02748.15	gi|289596669|ref|YP_003483365.1|	-	0.074	13.0	0.3	0.11	12.5	0.3	1.3	1	0	0	1	1	1	0	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
zf-C2H2	PF00096.26	gi|289596669|ref|YP_003483365.1|	-	0.29	11.7	5.0	0.49	11.0	3.9	1.9	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
zf-CHCC	PF10276.9	gi|289596669|ref|YP_003483365.1|	-	2.2	8.4	7.5	9.1	6.4	2.3	2.2	2	0	0	2	2	2	0	Zinc-finger	domain
HxlR	PF01638.17	gi|289596670|ref|YP_003483366.1|	-	1.5e-05	24.8	0.5	2.2e-05	24.2	0.5	1.3	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
DUF4364	PF14277.6	gi|289596670|ref|YP_003483366.1|	-	2.5e-05	24.1	0.2	4.1e-05	23.4	0.2	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
HTH_34	PF13601.6	gi|289596670|ref|YP_003483366.1|	-	4.6e-05	23.5	0.7	0.00011	22.3	0.4	1.8	1	1	1	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_45	PF14947.6	gi|289596670|ref|YP_003483366.1|	-	5e-05	23.2	1.6	9.6e-05	22.3	1.6	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix
Penicillinase_R	PF03965.16	gi|289596670|ref|YP_003483366.1|	-	5.8e-05	23.4	0.5	0.0001	22.6	0.4	1.5	1	1	0	1	1	1	1	Penicillinase	repressor
HTH_27	PF13463.6	gi|289596670|ref|YP_003483366.1|	-	0.001	19.5	0.1	0.0019	18.7	0.1	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
PadR	PF03551.14	gi|289596670|ref|YP_003483366.1|	-	0.014	15.3	0.3	0.027	14.4	0.3	1.5	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
DUF1571	PF07608.11	gi|289596670|ref|YP_003483366.1|	-	0.015	14.8	0.1	0.019	14.4	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1571)
RAP-1	PF03085.15	gi|289596670|ref|YP_003483366.1|	-	0.029	14.1	0.0	0.043	13.5	0.0	1.4	1	0	0	1	1	1	0	Rhoptry-associated	protein	1	(RAP-1)
DUF155	PF02582.14	gi|289596671|ref|YP_003483367.1|	-	0.00032	20.8	0.1	0.0004	20.5	0.1	1.2	1	0	0	1	1	1	1	Uncharacterised	ACR,	YagE	family	COG1723
YqzH	PF14164.6	gi|289596671|ref|YP_003483367.1|	-	0.0074	16.3	0.5	0.029	14.5	0.3	2.1	2	0	0	2	2	2	1	YqzH-like	protein
UvrA_DNA-bind	PF17755.1	gi|289596671|ref|YP_003483367.1|	-	0.01	16.2	0.1	0.12	12.7	0.0	2.4	2	1	0	2	2	2	0	UvrA	DNA-binding	domain
NADH-G_4Fe-4S_3	PF10588.9	gi|289596671|ref|YP_003483367.1|	-	0.071	12.7	0.4	0.12	11.9	0.4	1.4	1	0	0	1	1	1	0	NADH-ubiquinone	oxidoreductase-G	iron-sulfur	binding	region
FRG	PF08867.11	gi|289596671|ref|YP_003483367.1|	-	0.18	12.8	0.0	0.57	11.2	0.0	1.7	2	0	0	2	2	2	0	FRG	domain
Sulfolobus_pRN	PF05584.11	gi|289596673|ref|YP_003483369.1|	-	0.016	15.3	0.1	0.021	14.9	0.1	1.4	1	1	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
PDDEXK_1	PF12705.7	gi|289596676|ref|YP_003483372.1|	-	1.2e-08	35.2	2.6	2.1e-08	34.4	2.6	1.5	1	1	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
Cas_Cas4	PF01930.17	gi|289596676|ref|YP_003483372.1|	-	8.6e-06	25.9	7.4	6.3e-05	23.1	0.1	2.7	2	1	0	2	2	2	2	Domain	of	unknown	function	DUF83
Dna2	PF08696.11	gi|289596676|ref|YP_003483372.1|	-	0.057	13.2	0.1	0.19	11.5	0.0	1.8	2	0	0	2	2	2	0	DNA	replication	factor	Dna2
Ribosomal_L32p	PF01783.23	gi|289596676|ref|YP_003483372.1|	-	0.085	13.1	0.0	11	6.3	0.0	2.7	2	0	0	2	2	2	0	Ribosomal	L32p	protein	family
AAA_lid_1	PF17857.1	gi|289596677|ref|YP_003483373.1|	-	0.012	15.9	0.2	0.013	15.7	0.2	1.2	1	0	0	1	1	1	0	AAA+	lid	domain
SWIM	PF04434.17	gi|289596678|ref|YP_003483374.1|	-	0.085	12.5	0.1	0.14	11.9	0.1	1.3	1	0	0	1	1	1	0	SWIM	zinc	finger
EKAL	PF17986.1	gi|289596679|ref|YP_003483375.1|	-	0.017	15.2	0.2	0.031	14.3	0.2	1.4	1	0	0	1	1	1	0	EMP3-KAHRP-like	N-terminal	domain
SF3a60_bindingd	PF12108.8	gi|289596679|ref|YP_003483375.1|	-	0.024	14.5	6.3	0.77	9.7	0.3	2.7	3	0	0	3	3	3	0	Splicing	factor	SF3a60	binding	domain
KH_8	PF17903.1	gi|289596679|ref|YP_003483375.1|	-	0.066	13.3	0.2	0.19	11.9	0.1	1.7	2	0	0	2	2	2	0	Krr1	KH1	domain
RRF	PF01765.19	gi|289596679|ref|YP_003483375.1|	-	0.095	12.6	0.0	0.1	12.6	0.0	1.2	1	0	0	1	1	1	0	Ribosome	recycling	factor
DUF3388	PF11868.8	gi|289596680|ref|YP_003483376.1|	-	0.017	14.5	0.8	0.019	14.3	0.8	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3388)
Bac_DNA_binding	PF00216.21	gi|289596680|ref|YP_003483376.1|	-	0.036	14.3	0.3	0.045	14.0	0.3	1.2	1	0	0	1	1	1	0	Bacterial	DNA-binding	protein
DUF2508	PF10704.9	gi|289596681|ref|YP_003483377.1|	-	0.058	13.6	0.2	0.064	13.4	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2508)
Ribonucleas_3_2	PF11469.8	gi|289596681|ref|YP_003483377.1|	-	0.1	13.0	0.4	0.12	12.8	0.4	1.1	1	0	0	1	1	1	0	Ribonuclease	III
LPD5	PF18799.1	gi|289596683|ref|YP_003483379.1|	-	0.019	15.3	0.2	0.021	15.2	0.2	1.1	1	0	0	1	1	1	0	Large	polyvalent	protein-associated	domain	5
DUF3920	PF13058.6	gi|289596684|ref|YP_003483380.1|	-	0.0005	20.3	0.5	0.0012	19.0	0.0	1.9	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF3920)
MPTase-PolyVal	PF18818.1	gi|289596684|ref|YP_003483380.1|	-	0.00071	19.6	0.2	0.0023	18.0	0.2	2.0	1	1	0	1	1	1	1	Metallopeptidase	superfamily	domain
LEH	PF07858.12	gi|289596684|ref|YP_003483380.1|	-	0.13	12.4	0.0	0.4	10.8	0.0	1.8	2	0	0	2	2	2	0	Limonene-1,2-epoxide	hydrolase	catalytic	domain
AAA_5	PF07728.14	gi|289596685|ref|YP_003483381.1|	-	3.8e-20	72.3	0.0	5.9e-19	68.4	0.0	2.9	3	1	0	3	3	3	1	AAA	domain	(dynein-related	subfamily)
AAA_22	PF13401.6	gi|289596685|ref|YP_003483381.1|	-	1.2e-06	28.8	0.0	3.9e-06	27.2	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.17	gi|289596685|ref|YP_003483381.1|	-	1.2e-05	25.2	0.0	2.9e-05	23.9	0.0	1.6	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
ATPase	PF06745.13	gi|289596685|ref|YP_003483381.1|	-	1.2e-05	24.8	0.0	3.1e-05	23.5	0.0	1.6	1	0	0	1	1	1	1	KaiC
AAA	PF00004.29	gi|289596685|ref|YP_003483381.1|	-	1.9e-05	25.1	2.3	0.00083	19.8	0.3	3.3	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_7	PF12775.7	gi|289596685|ref|YP_003483381.1|	-	2.9e-05	23.7	0.0	6e-05	22.6	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	dynein	motor	region
PhoH	PF02562.16	gi|289596685|ref|YP_003483381.1|	-	0.00089	18.8	0.0	0.0018	17.8	0.0	1.4	1	0	0	1	1	1	1	PhoH-like	protein
AAA_24	PF13479.6	gi|289596685|ref|YP_003483381.1|	-	0.0059	16.4	0.4	0.024	14.4	0.0	2.3	3	0	0	3	3	3	1	AAA	domain
AAA_16	PF13191.6	gi|289596685|ref|YP_003483381.1|	-	0.0083	16.5	0.0	0.018	15.4	0.0	1.6	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_25	PF13481.6	gi|289596685|ref|YP_003483381.1|	-	0.0085	15.7	0.0	0.02	14.5	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.6	gi|289596685|ref|YP_003483381.1|	-	0.0096	16.5	0.1	0.66	10.5	0.0	2.8	2	0	0	2	2	2	1	AAA	domain
AAA_14	PF13173.6	gi|289596685|ref|YP_003483381.1|	-	0.07	13.2	2.2	4.7	7.3	0.0	3.3	2	1	1	3	3	3	0	AAA	domain
AAA_19	PF13245.6	gi|289596685|ref|YP_003483381.1|	-	0.14	12.5	0.1	1.2	9.4	0.1	2.2	1	1	0	1	1	1	0	AAA	domain
Mg_chelatase	PF01078.21	gi|289596685|ref|YP_003483381.1|	-	0.2	11.0	0.0	0.41	10.0	0.0	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
McrBC	PF10117.9	gi|289596686|ref|YP_003483382.1|	-	8.1e-68	228.9	1.9	1.1e-67	228.5	1.9	1.1	1	0	0	1	1	1	1	McrBC	5-methylcytosine	restriction	system	component
TF_Zn_Ribbon	PF08271.12	gi|289596687|ref|YP_003483383.1|	-	0.00024	20.5	3.2	0.00052	19.5	3.2	1.6	1	0	0	1	1	1	1	TFIIB	zinc-binding
zinc_ribbon_2	PF13240.6	gi|289596687|ref|YP_003483383.1|	-	0.0011	18.6	6.4	0.0023	17.6	6.4	1.6	1	1	0	1	1	1	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|289596687|ref|YP_003483383.1|	-	0.0021	17.4	5.2	0.0037	16.6	5.2	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.7	gi|289596687|ref|YP_003483383.1|	-	0.0035	17.3	0.4	0.0051	16.8	0.4	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
TackOD1	PF18551.1	gi|289596687|ref|YP_003483383.1|	-	0.016	14.9	0.1	0.024	14.3	0.1	1.3	1	0	0	1	1	1	0	Thaumarchaeal	output	domain	1
Prok-RING_1	PF14446.6	gi|289596687|ref|YP_003483383.1|	-	0.051	13.5	0.9	0.085	12.8	0.9	1.3	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
Auto_anti-p27	PF06677.12	gi|289596687|ref|YP_003483383.1|	-	0.086	13.0	1.4	0.15	12.2	1.4	1.4	1	0	0	1	1	1	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
OrfB_Zn_ribbon	PF07282.11	gi|289596687|ref|YP_003483383.1|	-	0.12	12.3	0.7	0.35	10.8	0.7	1.7	1	1	0	1	1	1	0	Putative	transposase	DNA-binding	domain
Prim_Zn_Ribbon	PF08273.12	gi|289596687|ref|YP_003483383.1|	-	0.22	11.8	4.2	1	9.7	0.2	2.4	2	0	0	2	2	2	0	Zinc-binding	domain	of	primase-helicase
zf-tcix	PF14952.6	gi|289596687|ref|YP_003483383.1|	-	0.7	9.6	7.1	0.57	9.8	1.0	2.2	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
zf-H2C2_2	PF13465.6	gi|289596687|ref|YP_003483383.1|	-	1.2	9.7	4.1	10	6.7	0.3	2.4	2	0	0	2	2	2	0	Zinc-finger	double	domain
zf-ISL3	PF14690.6	gi|289596687|ref|YP_003483383.1|	-	1.7	9.4	7.3	21	5.9	0.4	3.0	2	1	1	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-C2H2_3	PF13878.6	gi|289596687|ref|YP_003483383.1|	-	1.9	8.4	5.1	0.6	10.0	0.8	2.1	1	1	1	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
zf-LITAF-like	PF10601.9	gi|289596687|ref|YP_003483383.1|	-	3.4	8.0	5.4	7.1	7.0	1.0	2.3	1	1	1	2	2	2	0	LITAF-like	zinc	ribbon	domain
Zn-ribbon_8	PF09723.10	gi|289596687|ref|YP_003483383.1|	-	3.8	7.7	7.5	18	5.6	7.5	2.0	1	1	0	1	1	1	0	Zinc	ribbon	domain
DUF35_N	PF12172.8	gi|289596687|ref|YP_003483383.1|	-	4.8	7.2	5.3	64	3.6	5.3	2.3	1	1	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF1610	PF07754.11	gi|289596687|ref|YP_003483383.1|	-	4.9	7.2	13.6	6.9	6.7	1.2	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
THUMP	PF02926.17	gi|289596688|ref|YP_003483384.1|	-	0.047	13.8	0.0	0.078	13.1	0.0	1.4	1	0	0	1	1	1	0	THUMP	domain
DUF507	PF04368.13	gi|289596688|ref|YP_003483384.1|	-	0.062	13.2	0.3	0.094	12.6	0.3	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF507)
RHH_1	PF01402.21	gi|289596689|ref|YP_003483385.1|	-	0.00045	20.1	0.0	0.0011	18.8	0.0	1.7	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
MobL	PF18555.1	gi|289596690|ref|YP_003483386.1|	-	0.00018	20.9	1.4	0.00038	19.8	1.4	1.5	1	1	0	1	1	1	1	MobL	relaxases
rve_3	PF13683.6	gi|289596690|ref|YP_003483386.1|	-	0.00044	20.0	1.1	0.005	16.6	0.3	2.9	3	0	0	3	3	3	1	Integrase	core	domain
Pox_EPC_I2-L1	PF12575.8	gi|289596690|ref|YP_003483386.1|	-	0.0027	17.9	0.2	0.84	9.9	0.0	2.2	2	0	0	2	2	2	2	Poxvirus	entry	protein	complex	L1	and	I2
TrwB_AAD_bind	PF10412.9	gi|289596691|ref|YP_003483387.1|	-	3.9e-42	144.5	0.0	6.8e-23	81.2	0.0	2.1	1	1	1	2	2	2	2	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
T4SS-DNA_transf	PF02534.14	gi|289596691|ref|YP_003483387.1|	-	2.3e-24	86.1	0.1	3.9e-24	85.3	0.1	1.3	1	1	0	1	1	1	1	Type	IV	secretory	system	Conjugative	DNA	transfer
TraG-D_C	PF12696.7	gi|289596691|ref|YP_003483387.1|	-	1.5e-14	54.1	0.0	2.7e-14	53.3	0.0	1.3	1	0	0	1	1	1	1	TraM	recognition	site	of	TraD	and	TraG
AAA_14	PF13173.6	gi|289596691|ref|YP_003483387.1|	-	0.00011	22.2	0.1	0.92	9.5	0.0	3.1	2	1	1	3	3	3	2	AAA	domain
AAA_22	PF13401.6	gi|289596691|ref|YP_003483387.1|	-	0.00015	22.0	0.0	0.0062	16.8	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
DUF87	PF01935.17	gi|289596691|ref|YP_003483387.1|	-	0.00022	21.4	0.0	0.00047	20.3	0.0	1.5	1	1	0	1	1	1	1	Helicase	HerA,	central	domain
Zeta_toxin	PF06414.12	gi|289596691|ref|YP_003483387.1|	-	0.0035	16.6	0.0	0.011	15.0	0.0	1.8	1	0	0	1	1	1	1	Zeta	toxin
AAA_19	PF13245.6	gi|289596691|ref|YP_003483387.1|	-	0.0064	16.8	0.0	0.081	13.3	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.6	gi|289596691|ref|YP_003483387.1|	-	0.016	15.6	0.0	0.04	14.3	0.0	1.8	2	1	0	2	2	1	0	AAA	ATPase	domain
UvrD-helicase	PF00580.21	gi|289596691|ref|YP_003483387.1|	-	0.019	14.5	0.5	0.063	12.8	0.0	1.9	2	0	0	2	2	2	0	UvrD/REP	helicase	N-terminal	domain
ResIII	PF04851.15	gi|289596691|ref|YP_003483387.1|	-	0.026	14.5	0.3	0.78	9.7	0.0	2.8	2	1	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
ATPase_2	PF01637.18	gi|289596691|ref|YP_003483387.1|	-	0.031	14.2	1.8	0.08	12.8	0.1	2.5	4	0	0	4	4	4	0	ATPase	domain	predominantly	from	Archaea
ATP_bind_1	PF03029.17	gi|289596691|ref|YP_003483387.1|	-	0.037	13.8	0.0	0.17	11.7	0.0	1.9	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
Viral_helicase1	PF01443.18	gi|289596691|ref|YP_003483387.1|	-	0.049	13.4	0.0	0.13	12.0	0.0	1.6	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
AAA_33	PF13671.6	gi|289596691|ref|YP_003483387.1|	-	0.054	13.6	0.0	0.12	12.5	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_18	PF13238.6	gi|289596691|ref|YP_003483387.1|	-	0.06	13.9	0.0	0.15	12.6	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
AAA_7	PF12775.7	gi|289596691|ref|YP_003483387.1|	-	0.067	12.7	0.0	0.17	11.4	0.0	1.6	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
RNA12	PF10443.9	gi|289596691|ref|YP_003483387.1|	-	0.07	11.8	0.0	0.11	11.2	0.0	1.2	1	0	0	1	1	1	0	RNA12	protein
cobW	PF02492.19	gi|289596691|ref|YP_003483387.1|	-	0.075	12.6	0.0	0.16	11.6	0.0	1.5	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
NB-ARC	PF00931.22	gi|289596691|ref|YP_003483387.1|	-	0.11	11.6	0.0	0.3	10.2	0.0	1.8	1	1	0	1	1	1	0	NB-ARC	domain
AAA_5	PF07728.14	gi|289596691|ref|YP_003483387.1|	-	0.16	12.0	0.0	0.38	10.7	0.0	1.6	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
MobB	PF03205.14	gi|289596691|ref|YP_003483387.1|	-	0.18	11.7	0.0	0.81	9.6	0.0	1.9	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
HemY_N	PF07219.13	gi|289596692|ref|YP_003483388.1|	-	0.051	13.8	0.0	0.14	12.4	0.0	1.7	1	0	0	1	1	1	0	HemY	protein	N-terminus
Acyl_transf_3	PF01757.22	gi|289596692|ref|YP_003483388.1|	-	0.12	11.4	1.7	0.19	10.8	1.7	1.3	1	0	0	1	1	1	0	Acyltransferase	family
Lon_C	PF05362.13	gi|289596692|ref|YP_003483388.1|	-	0.17	11.4	0.1	17	4.9	0.0	2.2	1	1	1	2	2	2	0	Lon	protease	(S16)	C-terminal	proteolytic	domain
CRISPR_Cas2	PF09827.9	gi|289596693|ref|YP_003483389.1|	-	9.3e-21	73.8	0.4	1.1e-20	73.6	0.4	1.1	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas2
Cas_Cas1	PF01867.16	gi|289596694|ref|YP_003483390.1|	-	3e-73	246.4	0.8	3.7e-73	246.1	0.8	1.1	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas1
ABC_tran_CTD	PF16326.5	gi|289596694|ref|YP_003483390.1|	-	0.027	14.7	0.6	0.053	13.8	0.6	1.4	1	0	0	1	1	1	0	ABC	transporter	C-terminal	domain
DASH_Dad4	PF08650.10	gi|289596694|ref|YP_003483390.1|	-	0.064	13.2	0.6	0.14	12.2	0.6	1.5	1	0	0	1	1	1	0	DASH	complex	subunit	Dad4
Cas_Cas4	PF01930.17	gi|289596695|ref|YP_003483391.1|	-	1.3e-44	152.1	2.0	1.5e-44	152.0	2.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF83
PDDEXK_1	PF12705.7	gi|289596695|ref|YP_003483391.1|	-	8.3e-06	25.9	0.3	1.8e-05	24.8	0.2	1.5	1	1	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
DUF1284	PF06935.11	gi|289596695|ref|YP_003483391.1|	-	0.0062	17.0	0.2	0.011	16.1	0.2	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1284)
Cas_Cas6	PF01881.16	gi|289596696|ref|YP_003483392.1|	-	2.4e-24	86.6	1.8	3.3e-24	86.1	1.8	1.2	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas6
Cas_NE0113	PF09623.10	gi|289596697|ref|YP_003483393.1|	-	1.7e-18	67.1	0.0	2.4e-18	66.6	0.0	1.3	1	0	0	1	1	1	1	CRISPR-associated	protein	NE0113	(Cas_NE0113)
HupH_C	PF04809.13	gi|289596697|ref|YP_003483393.1|	-	0.0024	17.6	0.0	0.0098	15.6	0.0	2.0	2	0	0	2	2	2	1	HupH	hydrogenase	expression	protein,	C-terminal	conserved	region
Cas_APE2256	PF09651.10	gi|289596697|ref|YP_003483393.1|	-	0.045	13.7	0.0	0.073	13.0	0.0	1.4	1	0	0	1	1	1	0	CRISPR-associated	protein	(Cas_APE2256)
Methyltransf_23	PF13489.6	gi|289596697|ref|YP_003483393.1|	-	0.21	11.4	0.0	0.41	10.5	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
Cas_DxTHG	PF09455.10	gi|289596698|ref|YP_003483394.1|	-	1.5e-64	218.9	6.7	1.8e-64	218.6	6.7	1.1	1	0	0	1	1	1	1	CRISPR-associated	(Cas)	DxTHG	family
HEPN_MAE_28990	PF18737.1	gi|289596698|ref|YP_003483394.1|	-	0.025	14.5	3.0	0.037	13.9	2.4	1.8	1	1	0	1	1	1	0	MAE_28990/MAE_18760-like	HEPN
HEPN_Apea	PF18739.1	gi|289596698|ref|YP_003483394.1|	-	0.067	13.6	1.9	0.13	12.7	0.4	2.2	1	1	1	2	2	2	0	Apea-like	HEPN
HEPN_RiboL-PSP	PF18735.1	gi|289596698|ref|YP_003483394.1|	-	0.095	12.6	8.5	0.41	10.5	8.2	2.2	1	1	1	2	2	2	0	RiboL-PSP-HEPN
RAMPs	PF03787.15	gi|289596699|ref|YP_003483395.1|	-	1.1e-10	42.0	0.0	2.2e-10	41.0	0.0	1.6	1	1	0	1	1	1	1	RAMP	superfamily
Csm4_C	PF17953.1	gi|289596700|ref|YP_003483396.1|	-	0.00015	21.6	0.0	0.00031	20.5	0.0	1.5	1	0	0	1	1	1	1	CRISPR	Csm4	C-terminal	domain
RAMPs	PF03787.15	gi|289596701|ref|YP_003483397.1|	-	9.4e-15	55.2	0.3	1.6e-14	54.4	0.3	1.4	1	1	0	1	1	1	1	RAMP	superfamily
Csm2_III-A	PF03750.13	gi|289596702|ref|YP_003483398.1|	-	5.7e-21	75.5	0.2	5.7e-21	75.5	0.2	1.7	2	0	0	2	2	2	1	Csm2	Type	III-A
Peptidase_S28	PF05577.12	gi|289596702|ref|YP_003483398.1|	-	0.049	12.4	0.0	0.067	12.0	0.0	1.1	1	0	0	1	1	1	0	Serine	carboxypeptidase	S28
Csm1_B	PF18211.1	gi|289596703|ref|YP_003483399.1|	-	9.3e-19	67.1	0.1	6.1e-18	64.5	0.0	2.2	2	0	0	2	2	2	1	Csm1	subunit	domain	B
HD	PF01966.22	gi|289596703|ref|YP_003483399.1|	-	1.1e-08	35.3	0.7	3.3e-08	33.8	0.3	1.9	2	0	0	2	2	2	1	HD	domain
mCpol	PF18182.1	gi|289596703|ref|YP_003483399.1|	-	0.016	15.5	0.2	0.23	11.8	0.1	2.4	2	0	0	2	2	2	0	minimal	CRISPR	polymerase	domain
HD_6	PF18019.1	gi|289596703|ref|YP_003483399.1|	-	0.14	12.2	0.1	0.66	10.1	0.1	2.0	2	1	0	2	2	2	0	HD	domain
DUF4143	PF13635.6	gi|289596704|ref|YP_003483400.1|	-	1.3e-25	89.9	0.1	2.8e-25	88.9	0.0	1.6	2	0	0	2	2	1	1	Domain	of	unknown	function	(DUF4143)
AAA_14	PF13173.6	gi|289596704|ref|YP_003483400.1|	-	2.5e-23	82.5	0.0	5.3e-23	81.5	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
HTH_24	PF13412.6	gi|289596704|ref|YP_003483400.1|	-	0.00038	20.0	0.2	0.0017	17.9	0.1	2.2	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.12	gi|289596704|ref|YP_003483400.1|	-	0.00062	19.7	0.0	0.0017	18.2	0.0	1.8	1	0	0	1	1	1	1	HTH	domain
AAA_16	PF13191.6	gi|289596704|ref|YP_003483400.1|	-	0.0032	17.9	0.0	0.0075	16.7	0.0	1.7	1	0	0	1	1	1	1	AAA	ATPase	domain
HTH_29	PF13551.6	gi|289596704|ref|YP_003483400.1|	-	0.0043	17.0	0.0	0.0083	16.1	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn	helix
AAA_22	PF13401.6	gi|289596704|ref|YP_003483400.1|	-	0.0045	17.3	0.0	0.065	13.5	0.0	2.7	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.6	gi|289596704|ref|YP_003483400.1|	-	0.0046	17.1	0.0	0.023	14.9	0.0	2.1	2	1	0	2	2	2	1	AAA	domain
ATPase_2	PF01637.18	gi|289596704|ref|YP_003483400.1|	-	0.0047	16.9	0.0	0.028	14.4	0.0	2.1	1	1	1	2	2	2	1	ATPase	domain	predominantly	from	Archaea
HTH_Crp_2	PF13545.6	gi|289596704|ref|YP_003483400.1|	-	0.0068	16.4	0.0	0.019	14.9	0.0	1.8	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
FaeA	PF04703.12	gi|289596704|ref|YP_003483400.1|	-	0.01	16.2	0.0	0.027	14.8	0.0	1.8	1	0	0	1	1	1	1	FaeA-like	protein
NUMOD1	PF07453.13	gi|289596704|ref|YP_003483400.1|	-	0.013	15.8	0.1	0.032	14.5	0.1	1.7	1	0	0	1	1	1	0	NUMOD1	domain
Rrf2	PF02082.20	gi|289596704|ref|YP_003483400.1|	-	0.013	15.8	0.0	0.043	14.2	0.0	1.9	2	0	0	2	2	1	0	Transcriptional	regulator
MTES_1575	PF18741.1	gi|289596704|ref|YP_003483400.1|	-	0.048	13.8	0.1	0.4	10.9	0.0	2.4	2	1	0	2	2	2	0	REase_MTES_1575
HTH_45	PF14947.6	gi|289596704|ref|YP_003483400.1|	-	0.052	13.5	0.0	0.15	12.0	0.0	1.8	1	0	0	1	1	1	0	Winged	helix-turn-helix
HTH_36	PF13730.6	gi|289596704|ref|YP_003483400.1|	-	0.055	13.4	0.1	0.11	12.5	0.1	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
DUF2089	PF09862.9	gi|289596704|ref|YP_003483400.1|	-	0.055	13.5	0.0	0.13	12.3	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2089)
HTH_28	PF13518.6	gi|289596704|ref|YP_003483400.1|	-	0.066	13.4	0.0	0.18	11.9	0.0	1.7	2	0	0	2	2	1	0	Helix-turn-helix	domain
AAA_18	PF13238.6	gi|289596704|ref|YP_003483400.1|	-	0.075	13.6	0.0	0.21	12.1	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
HTH_20	PF12840.7	gi|289596704|ref|YP_003483400.1|	-	0.081	13.0	0.0	0.19	11.8	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
G-alpha	PF00503.20	gi|289596704|ref|YP_003483400.1|	-	0.082	12.0	0.0	0.083	12.0	0.0	1.5	1	1	0	1	1	1	0	G-protein	alpha	subunit
Gtr1_RagA	PF04670.12	gi|289596704|ref|YP_003483400.1|	-	0.084	12.2	0.2	11	5.3	0.0	2.3	2	0	0	2	2	2	0	Gtr1/RagA	G	protein	conserved	region
AAA_28	PF13521.6	gi|289596704|ref|YP_003483400.1|	-	0.096	12.9	0.0	4.8	7.4	0.0	3.0	3	0	0	3	3	3	0	AAA	domain
SRPRB	PF09439.10	gi|289596704|ref|YP_003483400.1|	-	0.11	11.9	0.0	0.17	11.3	0.0	1.3	1	0	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
UBA_6	PF18039.1	gi|289596704|ref|YP_003483400.1|	-	0.13	12.2	0.0	0.41	10.6	0.0	1.9	2	0	0	2	2	1	0	UBA-like	domain
HTH_DeoR	PF08220.12	gi|289596704|ref|YP_003483400.1|	-	0.15	11.8	0.0	0.34	10.7	0.0	1.6	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
ParE_toxin	PF05016.15	gi|289596707|ref|YP_003483403.1|	-	1e-08	35.7	1.5	1.1e-08	35.5	1.5	1.0	1	0	0	1	1	1	1	ParE	toxin	of	type	II	toxin-antitoxin	system,	parDE
Gp49	PF05973.14	gi|289596707|ref|YP_003483403.1|	-	0.012	15.8	1.6	0.017	15.3	1.6	1.4	1	1	0	1	1	1	0	Phage	derived	protein	Gp49-like	(DUF891)
ParE-like_toxin	PF15781.5	gi|289596707|ref|YP_003483403.1|	-	0.021	14.8	1.2	0.049	13.6	1.2	1.6	1	1	0	1	1	1	0	ParE-like	toxin	of	type	II	bacterial	toxin-antitoxin	system
DUF104	PF01954.16	gi|289596708|ref|YP_003483404.1|	-	3.2e-07	30.7	5.3	6.1e-07	29.8	5.3	1.6	1	1	0	1	1	1	1	Protein	of	unknown	function	DUF104
CoaE	PF01121.20	gi|289596708|ref|YP_003483404.1|	-	0.068	12.8	0.1	0.071	12.8	0.1	1.0	1	0	0	1	1	1	0	Dephospho-CoA	kinase
Lactamase_B_2	PF12706.7	gi|289596709|ref|YP_003483405.1|	-	1.8e-13	50.5	0.2	1.1e-05	25.1	0.0	2.7	3	0	0	3	3	3	2	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|289596709|ref|YP_003483405.1|	-	5.1e-07	29.9	0.1	9.9e-06	25.7	0.0	2.4	2	0	0	2	2	2	1	Metallo-beta-lactamase	superfamily
RMMBL	PF07521.12	gi|289596709|ref|YP_003483405.1|	-	0.00015	21.6	0.0	0.00048	20.0	0.0	1.8	1	0	0	1	1	1	1	Zn-dependent	metallo-hydrolase	RNA	specificity	domain
Lactamase_B_3	PF13483.6	gi|289596709|ref|YP_003483405.1|	-	0.0019	18.1	0.3	0.18	11.7	0.1	3.3	2	1	1	3	3	3	1	Beta-lactamase	superfamily	domain
Diacid_rec	PF05651.13	gi|289596709|ref|YP_003483405.1|	-	0.13	11.9	0.0	0.31	10.7	0.0	1.6	1	0	0	1	1	1	0	Putative	sugar	diacid	recognition
AAA	PF00004.29	gi|289596710|ref|YP_003483406.1|	-	0.0029	18.0	0.0	0.0029	18.0	0.0	1.1	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_15	PF13175.6	gi|289596711|ref|YP_003483407.1|	-	6.7e-05	22.8	37.9	6.7e-05	22.8	37.9	3.5	2	1	0	2	2	2	1	AAA	ATPase	domain
AAA_27	PF13514.6	gi|289596711|ref|YP_003483407.1|	-	0.00055	19.6	0.1	0.00055	19.6	0.1	3.0	4	0	0	4	4	4	1	AAA	domain
TMF_DNA_bd	PF12329.8	gi|289596711|ref|YP_003483407.1|	-	0.0031	17.5	6.6	0.0031	17.5	6.6	8.4	5	2	2	7	7	7	2	TATA	element	modulatory	factor	1	DNA	binding
ERM	PF00769.19	gi|289596711|ref|YP_003483407.1|	-	0.0039	17.0	7.8	0.0039	17.0	7.8	4.5	1	1	3	4	4	4	2	Ezrin/radixin/moesin	family
CENP-F_leu_zip	PF10473.9	gi|289596711|ref|YP_003483407.1|	-	0.0053	16.8	6.9	0.0053	16.8	6.9	6.4	2	2	3	5	5	5	1	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
MetallophosC	PF16370.5	gi|289596711|ref|YP_003483407.1|	-	0.016	15.4	0.4	3.7	7.8	0.0	3.4	3	0	0	3	3	3	0	C	terminal	of	Calcineurin-like	phosphoesterase
AAA_29	PF13555.6	gi|289596711|ref|YP_003483407.1|	-	0.02	14.6	0.0	0.045	13.5	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
SbcCD_C	PF13558.6	gi|289596711|ref|YP_003483407.1|	-	0.033	14.4	0.0	0.075	13.3	0.0	1.6	1	0	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
SseC	PF04888.12	gi|289596711|ref|YP_003483407.1|	-	0.05	13.2	0.1	0.05	13.2	0.1	4.9	5	1	0	5	5	5	0	Secretion	system	effector	C	(SseC)	like	family
SMC_N	PF02463.19	gi|289596711|ref|YP_003483407.1|	-	0.21	11.0	22.1	1.5	8.2	0.1	2.9	2	1	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
Metallophos	PF00149.28	gi|289596712|ref|YP_003483408.1|	-	6.4e-15	56.2	3.3	1.9e-14	54.7	3.3	1.8	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.7	gi|289596712|ref|YP_003483408.1|	-	1.4e-10	41.6	0.0	2.3e-10	40.9	0.0	1.3	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Myb_DNA-binding	PF00249.31	gi|289596713|ref|YP_003483409.1|	-	0.17	12.1	0.9	1	9.6	0.0	2.5	2	1	1	3	3	3	0	Myb-like	DNA-binding	domain
Cas_Cas02710	PF09670.10	gi|289596714|ref|YP_003483410.1|	-	2.3e-06	26.7	0.4	5.3e-06	25.5	0.2	1.6	1	1	1	2	2	2	1	CRISPR-associated	protein	(Cas_Cas02710)
TrbC_Ftype	PF09673.10	gi|289596714|ref|YP_003483410.1|	-	0.053	13.6	0.0	0.12	12.4	0.0	1.5	1	0	0	1	1	1	0	Type-F	conjugative	transfer	system	pilin	assembly	protein
TrmB	PF01978.19	gi|289596714|ref|YP_003483410.1|	-	0.062	13.2	0.0	0.2	11.6	0.0	1.8	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
APG5	PF04106.12	gi|289596714|ref|YP_003483410.1|	-	0.07	12.7	0.1	0.077	12.6	0.1	1.2	1	0	0	1	1	1	0	Autophagy	protein	Apg5
PDDEXK_1	PF12705.7	gi|289596715|ref|YP_003483411.1|	-	0.18	11.7	0.0	0.25	11.2	0.0	1.2	1	0	0	1	1	1	0	PD-(D/E)XK	nuclease	superfamily
AAA_lid_2	PF17863.1	gi|289596717|ref|YP_003483413.1|	-	4.2e-06	26.5	0.0	8.4e-06	25.5	0.0	1.4	1	0	0	1	1	1	1	AAA	lid	domain
AAA_5	PF07728.14	gi|289596717|ref|YP_003483413.1|	-	0.00015	21.8	0.0	0.00065	19.7	0.0	2.1	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_3	PF07726.11	gi|289596717|ref|YP_003483413.1|	-	0.00034	20.5	0.0	0.00057	19.7	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_23	PF13476.6	gi|289596717|ref|YP_003483413.1|	-	0.0033	17.9	0.0	0.0044	17.5	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_lid_8	PF17868.1	gi|289596717|ref|YP_003483413.1|	-	0.012	15.5	0.0	0.036	13.9	0.0	1.8	1	0	0	1	1	1	0	AAA	lid	domain
Methyltransf_17	PF12692.7	gi|289596717|ref|YP_003483413.1|	-	0.074	13.1	0.0	0.16	11.9	0.0	1.5	1	0	0	1	1	1	0	S-adenosyl-L-methionine	methyltransferase
VWA_2	PF13519.6	gi|289596718|ref|YP_003483414.1|	-	6.8e-11	42.8	0.0	1.4e-10	41.8	0.0	1.5	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.28	gi|289596718|ref|YP_003483414.1|	-	1.6e-07	31.7	0.0	7.4e-07	29.6	0.0	2.0	2	0	0	2	2	2	1	von	Willebrand	factor	type	A	domain
CobT_C	PF11775.8	gi|289596718|ref|YP_003483414.1|	-	0.0015	18.3	0.0	0.0038	16.9	0.0	1.6	2	0	0	2	2	2	1	Cobalamin	biosynthesis	protein	CobT	VWA	domain
DUF58	PF01882.18	gi|289596718|ref|YP_003483414.1|	-	0.036	14.3	0.0	0.08	13.2	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF58
Mannitol_dh_C	PF08125.13	gi|289596719|ref|YP_003483415.1|	-	0.11	11.9	0.0	0.19	11.2	0.0	1.3	1	0	0	1	1	1	0	Mannitol	dehydrogenase	C-terminal	domain
SHOCT	PF09851.9	gi|289596721|ref|YP_003483417.1|	-	1.6e-06	27.7	6.0	1.6e-06	27.7	6.0	2.6	2	0	0	2	2	2	1	Short	C-terminal	domain
GvpG	PF05120.12	gi|289596721|ref|YP_003483417.1|	-	0.0057	16.6	6.1	0.0057	16.6	6.1	1.7	1	1	0	1	1	1	1	Gas	vesicle	protein	G
DMAP_binding	PF06464.11	gi|289596721|ref|YP_003483417.1|	-	0.031	15.1	5.5	0.031	15.1	5.5	2.0	1	1	1	2	2	2	0	DMAP1-binding	Domain
PepSY_TM	PF03929.16	gi|289596721|ref|YP_003483417.1|	-	0.47	10.1	6.1	0.23	11.1	3.0	1.8	1	1	1	2	2	2	0	PepSY-associated	TM	region
Phage_integrase	PF00589.22	gi|289596723|ref|YP_003483419.1|	-	8e-07	29.0	0.1	8.2e-06	25.7	0.1	1.9	1	1	0	1	1	1	1	Phage	integrase	family
DUF3873	PF12989.7	gi|289596723|ref|YP_003483419.1|	-	0.18	12.2	1.1	0.22	11.9	0.1	1.7	2	0	0	2	2	2	0	Domain	of	unknown	function,	B.	Theta	Gene	description	(DUF3873)
DrrA_P4M	PF14860.6	gi|289596724|ref|YP_003483420.1|	-	0.042	13.7	0.1	0.12	12.3	0.1	1.7	1	1	0	1	1	1	0	DrrA	phosphatidylinositol	4-phosphate	binding	domain
CBS	PF00571.28	gi|289596725|ref|YP_003483421.1|	-	1.6e-24	86.1	2.9	1e-12	48.3	0.2	2.2	2	0	0	2	2	2	2	CBS	domain
HTH_3	PF01381.22	gi|289596725|ref|YP_003483421.1|	-	2.4e-17	62.7	0.6	4e-16	58.8	0.2	2.2	2	0	0	2	2	2	1	Helix-turn-helix
HTH_31	PF13560.6	gi|289596725|ref|YP_003483421.1|	-	1.3e-10	41.5	0.0	2.9e-10	40.3	0.0	1.6	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_19	PF12844.7	gi|289596725|ref|YP_003483421.1|	-	5.1e-08	32.8	0.6	2.3e-07	30.7	0.2	2.2	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_37	PF13744.6	gi|289596725|ref|YP_003483421.1|	-	1.6e-05	24.8	0.1	5.1e-05	23.1	0.0	1.8	2	0	0	2	2	1	1	Helix-turn-helix	domain
HTH_25	PF13413.6	gi|289596725|ref|YP_003483421.1|	-	0.00017	21.3	0.0	0.00036	20.3	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_26	PF13443.6	gi|289596725|ref|YP_003483421.1|	-	0.0029	18.0	0.3	0.13	12.7	0.0	2.6	3	0	0	3	3	3	1	Cro/C1-type	HTH	DNA-binding	domain
HTH_23	PF13384.6	gi|289596725|ref|YP_003483421.1|	-	0.011	15.5	0.4	0.033	14.0	0.2	1.9	2	0	0	2	2	2	0	Homeodomain-like	domain
MqsA_antitoxin	PF15731.5	gi|289596725|ref|YP_003483421.1|	-	0.014	15.5	0.0	0.027	14.6	0.0	1.4	1	0	0	1	1	1	0	Antitoxin	component	of	bacterial	toxin-antitoxin	system,	MqsA
HTH_24	PF13412.6	gi|289596725|ref|YP_003483421.1|	-	0.025	14.2	0.1	0.1	12.2	0.0	2.0	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
Pou	PF00157.17	gi|289596725|ref|YP_003483421.1|	-	0.025	14.6	0.0	0.07	13.1	0.0	1.6	1	1	0	1	1	1	0	Pou	domain	-	N-terminal	to	homeobox	domain
TetR_N	PF00440.23	gi|289596725|ref|YP_003483421.1|	-	0.027	14.3	0.0	6.1	6.7	0.0	3.0	3	0	0	3	3	3	0	Bacterial	regulatory	proteins,	tetR	family
Sigma70_r4	PF04545.16	gi|289596725|ref|YP_003483421.1|	-	0.031	13.8	0.2	0.079	12.5	0.2	1.7	1	0	0	1	1	1	0	Sigma-70,	region	4
MarR	PF01047.22	gi|289596725|ref|YP_003483421.1|	-	0.033	14.1	0.0	0.071	13.1	0.0	1.5	1	0	0	1	1	1	0	MarR	family
DUF2786	PF10979.8	gi|289596725|ref|YP_003483421.1|	-	0.035	14.0	0.2	0.11	12.4	0.0	2.0	3	0	0	3	3	2	0	Protein	of	unknown	function	(DUF2786)
MarR_2	PF12802.7	gi|289596725|ref|YP_003483421.1|	-	0.053	13.4	0.0	0.14	12.1	0.0	1.7	1	0	0	1	1	1	0	MarR	family
YdaS_antitoxin	PF15943.5	gi|289596725|ref|YP_003483421.1|	-	0.091	12.6	0.0	0.17	11.8	0.0	1.4	1	0	0	1	1	1	0	Putative	antitoxin	of	bacterial	toxin-antitoxin	system,	YdaS/YdaT
TraI_2	PF07514.11	gi|289596725|ref|YP_003483421.1|	-	0.1	11.5	0.2	1.2	8.1	0.0	2.0	2	0	0	2	2	2	0	Putative	helicase
Trans_coact	PF16805.5	gi|289596726|ref|YP_003483422.1|	-	0.0088	16.1	0.3	0.01	15.9	0.3	1.0	1	0	0	1	1	1	1	Phage	late-transcription	coactivator
HTH_27	PF13463.6	gi|289596728|ref|YP_003483424.1|	-	1.2e-07	32.1	0.3	1.5e-07	31.8	0.3	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
PadR	PF03551.14	gi|289596728|ref|YP_003483424.1|	-	2.4e-06	27.4	0.1	3.2e-06	27.0	0.1	1.2	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_Crp_2	PF13545.6	gi|289596728|ref|YP_003483424.1|	-	3.3e-06	27.0	0.3	4.2e-06	26.6	0.3	1.3	1	1	0	1	1	1	1	Crp-like	helix-turn-helix	domain
MarR	PF01047.22	gi|289596728|ref|YP_003483424.1|	-	7.1e-06	25.9	0.2	1.1e-05	25.2	0.2	1.3	1	0	0	1	1	1	1	MarR	family
HTH_45	PF14947.6	gi|289596728|ref|YP_003483424.1|	-	7.8e-06	25.8	0.5	9.7e-06	25.5	0.5	1.3	1	1	0	1	1	1	1	Winged	helix-turn-helix
MarR_2	PF12802.7	gi|289596728|ref|YP_003483424.1|	-	1.1e-05	25.2	0.0	1.5e-05	24.8	0.0	1.3	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.19	gi|289596728|ref|YP_003483424.1|	-	7.8e-05	22.5	0.2	0.0001	22.1	0.2	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_5	PF01022.20	gi|289596728|ref|YP_003483424.1|	-	8.2e-05	22.4	0.5	8.2e-05	22.4	0.5	1.5	2	0	0	2	2	1	1	Bacterial	regulatory	protein,	arsR	family
Rrf2	PF02082.20	gi|289596728|ref|YP_003483424.1|	-	0.00012	22.3	0.1	0.00016	22.0	0.1	1.2	1	0	0	1	1	1	1	Transcriptional	regulator
DUF4364	PF14277.6	gi|289596728|ref|YP_003483424.1|	-	0.00014	21.7	0.1	0.00014	21.7	0.1	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
HTH_24	PF13412.6	gi|289596728|ref|YP_003483424.1|	-	0.00017	21.1	0.7	0.0004	19.9	0.7	1.6	1	1	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_20	PF12840.7	gi|289596728|ref|YP_003483424.1|	-	0.00057	19.9	0.0	0.0007	19.6	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
Replic_Relax	PF13814.6	gi|289596728|ref|YP_003483424.1|	-	0.0011	19.0	0.0	0.0012	18.9	0.0	1.1	1	0	0	1	1	1	1	Replication-relaxation
Mrr_N	PF14338.6	gi|289596728|ref|YP_003483424.1|	-	0.0016	18.5	0.1	0.0037	17.3	0.1	1.8	1	1	0	1	1	1	1	Mrr	N-terminal	domain
DUF505	PF04458.12	gi|289596728|ref|YP_003483424.1|	-	0.0016	16.9	0.2	0.0016	16.9	0.2	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF505)
HTH_34	PF13601.6	gi|289596728|ref|YP_003483424.1|	-	0.0042	17.2	0.4	0.0052	16.9	0.4	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HxlR	PF01638.17	gi|289596728|ref|YP_003483424.1|	-	0.0056	16.5	0.2	0.007	16.2	0.2	1.3	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_IclR	PF09339.10	gi|289596728|ref|YP_003483424.1|	-	0.0065	16.2	0.1	0.0092	15.8	0.1	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
Ribosomal_S25	PF03297.15	gi|289596728|ref|YP_003483424.1|	-	0.0097	16.1	0.1	0.012	15.8	0.1	1.3	1	0	0	1	1	1	1	S25	ribosomal	protein
Fe_dep_repress	PF01325.19	gi|289596728|ref|YP_003483424.1|	-	0.014	15.6	0.4	0.042	14.0	0.1	1.8	2	0	0	2	2	2	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DUF1495	PF07381.11	gi|289596728|ref|YP_003483424.1|	-	0.035	13.9	0.5	0.57	10.1	0.1	2.0	1	1	1	2	2	2	0	Winged	helix	DNA-binding	domain	(DUF1495)
Phage_rep_org_N	PF09681.10	gi|289596728|ref|YP_003483424.1|	-	0.045	13.7	0.0	0.063	13.2	0.0	1.3	1	1	0	1	1	1	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
TFIIE_alpha	PF02002.17	gi|289596728|ref|YP_003483424.1|	-	0.07	13.0	0.6	0.083	12.8	0.6	1.3	1	1	0	1	1	1	0	TFIIE	alpha	subunit
TetR	PF13972.6	gi|289596728|ref|YP_003483424.1|	-	0.14	11.9	0.0	0.18	11.5	0.0	1.1	1	0	0	1	1	1	0	Bacterial	transcriptional	repressor
N6_N4_Mtase	PF01555.18	gi|289596730|ref|YP_003483426.1|	-	1.6e-32	113.1	3.6	1.6e-32	113.1	3.6	4.3	2	2	0	2	2	2	1	DNA	methylase
UPF0020	PF01170.18	gi|289596730|ref|YP_003483426.1|	-	0.004	16.9	0.0	0.017	14.8	0.0	2.0	2	0	0	2	2	2	1	Putative	RNA	methylase	family	UPF0020
Lar_restr_allev	PF14354.6	gi|289596730|ref|YP_003483426.1|	-	0.13	12.7	0.1	0.34	11.3	0.1	1.7	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
Prim_Zn_Ribbon	PF08273.12	gi|289596730|ref|YP_003483426.1|	-	0.2	12.0	0.6	0.41	11.0	0.6	1.5	1	0	0	1	1	1	0	Zinc-binding	domain	of	primase-helicase
AAA_10	PF12846.7	gi|289596731|ref|YP_003483427.1|	-	1.7e-11	43.7	0.9	2.3e-10	39.9	0.9	2.0	1	1	0	1	1	1	1	AAA-like	domain
DUF87	PF01935.17	gi|289596731|ref|YP_003483427.1|	-	3.9e-06	27.1	0.5	1.4e-05	25.3	0.0	2.1	2	1	0	2	2	2	1	Helicase	HerA,	central	domain
AAA_22	PF13401.6	gi|289596731|ref|YP_003483427.1|	-	0.0026	18.0	0.1	1.2	9.4	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
FtsK_SpoIIIE	PF01580.18	gi|289596731|ref|YP_003483427.1|	-	0.019	14.3	0.0	0.051	12.9	0.0	1.6	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
putAbiC	PF16872.5	gi|289596731|ref|YP_003483427.1|	-	0.033	14.9	0.1	0.033	14.9	0.1	3.2	3	0	0	3	3	3	0	Putative	phage	abortive	infection	protein
Zot	PF05707.12	gi|289596731|ref|YP_003483427.1|	-	0.043	13.5	1.2	0.079	12.6	0.3	1.9	2	0	0	2	2	2	0	Zonular	occludens	toxin	(Zot)
AAA_14	PF13173.6	gi|289596731|ref|YP_003483427.1|	-	0.084	12.9	0.1	1.1	9.3	0.1	2.6	2	0	0	2	2	2	0	AAA	domain
DUF2070	PF09843.9	gi|289596732|ref|YP_003483428.1|	-	0.55	8.5	5.5	0.72	8.1	5.5	1.2	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
T4SS_CagC	PF16943.5	gi|289596737|ref|YP_003483433.1|	-	0.00095	19.3	0.3	0.0021	18.2	0.3	1.5	1	0	0	1	1	1	1	Cag	pathogenicity	island,	type	IV	secretory	system
GRP	PF07172.11	gi|289596737|ref|YP_003483433.1|	-	0.73	10.6	15.5	15	6.3	0.0	2.7	2	0	0	2	2	2	0	Glycine	rich	protein	family
GRP	PF07172.11	gi|289596738|ref|YP_003483434.1|	-	2.3	9.0	8.1	1.5e+02	3.1	8.4	2.3	2	0	0	2	2	2	0	Glycine	rich	protein	family
DUF4349	PF14257.6	gi|289596739|ref|YP_003483435.1|	-	0.014	14.8	1.0	0.017	14.5	1.0	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4349)
COPI_assoc	PF08507.10	gi|289596739|ref|YP_003483435.1|	-	0.026	14.6	0.5	0.031	14.3	0.5	1.1	1	0	0	1	1	1	0	COPI	associated	protein
Internalin_N	PF12354.8	gi|289596739|ref|YP_003483435.1|	-	0.59	10.2	2.3	1.9	8.6	0.0	2.1	2	0	0	2	2	2	0	Bacterial	adhesion/invasion	protein	N	terminal
Colicin_V	PF02674.16	gi|289596740|ref|YP_003483436.1|	-	0.0069	16.4	3.8	0.0069	16.4	3.8	1.9	2	0	0	2	2	2	1	Colicin	V	production	protein
TctB	PF07331.11	gi|289596740|ref|YP_003483436.1|	-	0.16	12.2	11.3	0.91	9.8	12.1	1.7	1	1	1	2	2	2	0	Tripartite	tricarboxylate	transporter	TctB	family
E1-E2_ATPase	PF00122.20	gi|289596740|ref|YP_003483436.1|	-	0.25	10.9	3.5	0.19	11.2	1.8	1.7	1	1	1	2	2	2	0	E1-E2	ATPase
DUF2976	PF11190.8	gi|289596740|ref|YP_003483436.1|	-	0.33	10.8	5.9	0.11	12.3	2.4	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2976)
DUF4282	PF14110.6	gi|289596740|ref|YP_003483436.1|	-	0.78	10.5	7.8	0.14	12.9	3.5	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4282)
Big_7	PF17957.1	gi|289596741|ref|YP_003483437.1|	-	7.9e-30	103.4	27.1	4.3e-11	43.4	0.2	6.6	6	0	0	6	6	6	5	Bacterial	Ig	domain
Big_3_3	PF13750.6	gi|289596741|ref|YP_003483437.1|	-	2.9e-18	66.0	5.8	0.00084	19.0	0.0	6.7	7	0	0	7	7	7	4	Bacterial	Ig-like	domain	(group	3)
Big_3_4	PF13754.6	gi|289596741|ref|YP_003483437.1|	-	0.0086	15.8	2.3	7	6.5	0.2	4.1	4	0	0	4	4	4	1	Domain	of	unknown	function
HlyD_3	PF13437.6	gi|289596741|ref|YP_003483437.1|	-	0.019	15.6	0.1	0.088	13.5	0.1	2.1	1	0	0	1	1	1	0	HlyD	family	secretion	protein
CcmH	PF03918.14	gi|289596741|ref|YP_003483437.1|	-	0.02	14.2	0.0	0.034	13.5	0.0	1.3	1	0	0	1	1	1	0	Cytochrome	C	biogenesis	protein
TMEM154	PF15102.6	gi|289596741|ref|YP_003483437.1|	-	0.03	14.2	0.1	0.058	13.3	0.1	1.4	1	0	0	1	1	1	0	TMEM154	protein	family
DUF2973	PF11189.8	gi|289596741|ref|YP_003483437.1|	-	0.045	13.8	0.1	0.14	12.3	0.1	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2973)
HYR	PF02494.16	gi|289596741|ref|YP_003483437.1|	-	0.058	13.7	9.0	3.8	7.9	0.0	5.2	6	1	0	6	6	6	0	HYR	domain
SAVED	PF18145.1	gi|289596741|ref|YP_003483437.1|	-	0.11	12.3	0.3	0.57	10.0	0.0	2.2	2	0	0	2	2	2	0	SMODS-associated	and	fused	to	various	effectors	sensor	domain
TMEM100	PF16311.5	gi|289596741|ref|YP_003483437.1|	-	0.15	11.7	0.1	0.26	10.9	0.1	1.3	1	0	0	1	1	1	0	Transmembrane	protein	100
Big_3_2	PF12245.8	gi|289596741|ref|YP_003483437.1|	-	0.17	12.2	8.1	1.7	8.9	0.1	4.8	5	2	1	6	6	6	0	Bacterial	Ig-like	domain
Cadherin	PF00028.17	gi|289596741|ref|YP_003483437.1|	-	0.32	11.5	3.5	10	6.6	0.1	4.4	5	0	0	5	5	5	0	Cadherin	domain
Biotin_lipoyl_2	PF13533.6	gi|289596743|ref|YP_003483439.1|	-	0.051	13.4	0.0	8	6.4	0.0	2.3	2	0	0	2	2	2	0	Biotin-lipoyl	like
TSC22	PF01166.18	gi|289596743|ref|YP_003483439.1|	-	0.13	12.6	0.5	0.13	12.6	0.5	1.9	2	0	0	2	2	2	0	TSC-22/dip/bun	family
BBP7	PF07585.11	gi|289596743|ref|YP_003483439.1|	-	0.19	10.9	0.0	0.29	10.3	0.0	1.1	1	0	0	1	1	1	0	Putative	beta	barrel	porin-7	(BBP7)
H-kinase_dim	PF02895.14	gi|289596743|ref|YP_003483439.1|	-	0.23	11.9	0.7	0.46	10.9	0.7	1.5	1	0	0	1	1	1	0	Signal	transducing	histidine	kinase,	homodimeric	domain
DUF3502	PF12010.8	gi|289596744|ref|YP_003483440.1|	-	0.064	13.9	0.0	0.064	13.9	0.0	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3502)
CarS-like	PF01864.17	gi|289596746|ref|YP_003483442.1|	-	2.8e-51	173.9	2.7	3.4e-51	173.7	2.7	1.0	1	0	0	1	1	1	1	CDP-archaeol	synthase
CTP_transf_1	PF01148.20	gi|289596746|ref|YP_003483442.1|	-	9.5e-07	28.8	5.5	9.5e-07	28.8	5.5	2.1	1	1	1	2	2	2	1	Cytidylyltransferase	family
Metallophos_2	PF12850.7	gi|289596748|ref|YP_003483444.1|	-	5.6e-32	111.2	0.0	6.6e-32	111.0	0.0	1.0	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.28	gi|289596748|ref|YP_003483444.1|	-	7.2e-19	69.1	0.4	4.2e-18	66.6	0.4	1.9	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_3	PF14582.6	gi|289596748|ref|YP_003483444.1|	-	0.0012	18.2	0.0	0.26	10.6	0.0	2.2	2	0	0	2	2	2	2	Metallophosphoesterase,	calcineurin	superfamily
AIM24	PF01987.17	gi|289596749|ref|YP_003483445.1|	-	7.1e-51	172.9	0.1	7.9e-51	172.7	0.1	1.0	1	0	0	1	1	1	1	Mitochondrial	biogenesis	AIM24
AAA	PF00004.29	gi|289596750|ref|YP_003483446.1|	-	1.2e-100	333.2	0.0	4.8e-49	166.1	0.0	2.6	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_lid_3	PF17862.1	gi|289596750|ref|YP_003483446.1|	-	7.6e-35	118.5	1.5	3e-18	65.4	0.3	2.7	2	0	0	2	2	2	2	AAA+	lid	domain
CDC48_N	PF02359.18	gi|289596750|ref|YP_003483446.1|	-	5.5e-27	93.8	0.5	3.1e-26	91.4	1.0	2.1	2	0	0	2	2	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
AAA_2	PF07724.14	gi|289596750|ref|YP_003483446.1|	-	9e-17	61.7	0.0	3.1e-07	30.7	0.0	2.6	2	0	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
RuvB_N	PF05496.12	gi|289596750|ref|YP_003483446.1|	-	9.5e-17	61.2	0.0	2e-08	34.1	0.0	2.7	2	0	0	2	2	2	2	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_16	PF13191.6	gi|289596750|ref|YP_003483446.1|	-	5.5e-15	56.2	0.0	3.2e-06	27.6	0.0	3.6	2	2	0	2	2	2	2	AAA	ATPase	domain
AAA_14	PF13173.6	gi|289596750|ref|YP_003483446.1|	-	3e-12	46.7	0.0	7.2e-05	22.8	0.0	3.7	4	0	0	4	4	4	2	AAA	domain
AAA_22	PF13401.6	gi|289596750|ref|YP_003483446.1|	-	4.9e-12	46.3	0.3	0.0047	17.2	0.0	4.2	2	2	1	3	3	3	3	AAA	domain
AAA_5	PF07728.14	gi|289596750|ref|YP_003483446.1|	-	3.4e-11	43.3	0.2	0.00038	20.5	0.0	4.3	3	2	0	3	3	3	2	AAA	domain	(dynein-related	subfamily)
TIP49	PF06068.13	gi|289596750|ref|YP_003483446.1|	-	3.8e-10	39.5	6.9	0.00011	21.5	0.1	3.4	3	1	0	3	3	3	2	TIP49	P-loop	domain
AAA_33	PF13671.6	gi|289596750|ref|YP_003483446.1|	-	1.5e-08	34.9	0.0	0.0084	16.3	0.0	2.8	2	1	0	2	2	2	2	AAA	domain
AAA_18	PF13238.6	gi|289596750|ref|YP_003483446.1|	-	4.4e-08	33.7	0.2	0.014	15.9	0.0	3.4	3	0	0	3	3	3	2	AAA	domain
IstB_IS21	PF01695.17	gi|289596750|ref|YP_003483446.1|	-	4.8e-08	32.9	0.0	0.0062	16.3	0.1	2.4	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
CDC48_2	PF02933.17	gi|289596750|ref|YP_003483446.1|	-	8.5e-08	31.9	2.2	8.5e-08	31.9	2.2	2.0	2	0	0	2	2	1	1	Cell	division	protein	48	(CDC48),	domain	2
ATPase	PF06745.13	gi|289596750|ref|YP_003483446.1|	-	1.5e-07	31.0	0.4	0.044	13.1	0.0	3.7	2	1	0	3	3	3	2	KaiC
Sigma54_activat	PF00158.26	gi|289596750|ref|YP_003483446.1|	-	2.7e-07	30.4	0.0	0.031	14.0	0.0	3.6	2	2	0	2	2	2	2	Sigma-54	interaction	domain
RNA_helicase	PF00910.22	gi|289596750|ref|YP_003483446.1|	-	2.8e-07	30.9	0.0	0.045	14.1	0.0	2.6	2	0	0	2	2	2	2	RNA	helicase
AAA_7	PF12775.7	gi|289596750|ref|YP_003483446.1|	-	3.3e-07	30.0	0.1	0.03	13.8	0.0	2.9	2	2	0	2	2	2	2	P-loop	containing	dynein	motor	region
Mg_chelatase	PF01078.21	gi|289596750|ref|YP_003483446.1|	-	3.9e-07	29.7	0.2	0.019	14.3	0.0	2.5	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_24	PF13479.6	gi|289596750|ref|YP_003483446.1|	-	5.4e-07	29.5	0.1	0.043	13.5	0.0	2.7	2	1	0	2	2	2	2	AAA	domain
AAA_28	PF13521.6	gi|289596750|ref|YP_003483446.1|	-	3.1e-06	27.5	0.0	0.14	12.4	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
ABC_tran	PF00005.27	gi|289596750|ref|YP_003483446.1|	-	3.2e-06	27.7	0.2	0.11	13.0	0.0	3.2	3	0	0	3	3	3	2	ABC	transporter
ATPase_2	PF01637.18	gi|289596750|ref|YP_003483446.1|	-	5.1e-06	26.6	0.1	0.051	13.5	0.0	3.9	2	2	1	3	3	3	1	ATPase	domain	predominantly	from	Archaea
DUF815	PF05673.13	gi|289596750|ref|YP_003483446.1|	-	7.4e-06	25.3	0.0	0.028	13.6	0.0	2.4	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
Vps4_C	PF09336.10	gi|289596750|ref|YP_003483446.1|	-	8e-06	25.8	1.3	0.07	13.1	0.2	3.1	3	0	0	3	3	2	2	Vps4	C	terminal	oligomerisation	domain
TsaE	PF02367.17	gi|289596750|ref|YP_003483446.1|	-	2.8e-05	24.1	0.0	0.16	11.9	0.0	2.4	2	0	0	2	2	2	2	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_25	PF13481.6	gi|289596750|ref|YP_003483446.1|	-	2.9e-05	23.7	2.5	0.43	10.1	0.1	3.6	2	1	1	3	3	3	2	AAA	domain
DUF2075	PF09848.9	gi|289596750|ref|YP_003483446.1|	-	3.6e-05	23.2	0.0	0.1	11.9	0.0	2.6	3	0	0	3	3	2	2	Uncharacterized	conserved	protein	(DUF2075)
Parvo_NS1	PF01057.17	gi|289596750|ref|YP_003483446.1|	-	4.1e-05	22.8	0.1	0.18	10.9	0.0	2.3	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
AAA_3	PF07726.11	gi|289596750|ref|YP_003483446.1|	-	4.2e-05	23.4	0.0	0.39	10.6	0.0	2.6	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_17	PF13207.6	gi|289596750|ref|YP_003483446.1|	-	6.7e-05	23.3	0.2	1.3	9.4	0.0	4.2	3	1	0	3	3	3	1	AAA	domain
Bac_DnaA	PF00308.18	gi|289596750|ref|YP_003483446.1|	-	8e-05	22.6	0.0	0.97	9.2	0.0	3.4	2	2	1	3	3	2	2	Bacterial	dnaA	protein
AAA_11	PF13086.6	gi|289596750|ref|YP_003483446.1|	-	0.00017	21.5	0.0	0.61	9.8	0.0	2.3	2	0	0	2	2	2	2	AAA	domain
AAA_19	PF13245.6	gi|289596750|ref|YP_003483446.1|	-	0.00018	21.8	0.4	1	9.7	0.0	2.9	2	1	1	3	3	3	2	AAA	domain
PhoH	PF02562.16	gi|289596750|ref|YP_003483446.1|	-	0.0002	20.9	3.8	0.21	11.0	0.1	3.4	4	0	0	4	4	3	2	PhoH-like	protein
AAA_30	PF13604.6	gi|289596750|ref|YP_003483446.1|	-	0.00032	20.5	0.1	1.1	8.9	0.0	2.8	2	0	0	2	2	2	2	AAA	domain
NB-ARC	PF00931.22	gi|289596750|ref|YP_003483446.1|	-	0.00038	19.7	0.1	0.69	9.0	0.0	2.7	3	0	0	3	3	2	2	NB-ARC	domain
Zeta_toxin	PF06414.12	gi|289596750|ref|YP_003483446.1|	-	0.00041	19.7	0.1	0.84	8.9	0.0	2.5	2	0	0	2	2	2	2	Zeta	toxin
NTPase_1	PF03266.15	gi|289596750|ref|YP_003483446.1|	-	0.00044	20.2	3.9	8.5	6.3	0.0	4.8	3	1	1	4	4	4	0	NTPase
NACHT	PF05729.12	gi|289596750|ref|YP_003483446.1|	-	0.00067	19.6	0.1	1.5	8.8	0.0	3.5	3	0	0	3	3	3	1	NACHT	domain
Sigma54_activ_2	PF14532.6	gi|289596750|ref|YP_003483446.1|	-	0.0016	18.5	0.0	1.3	9.1	0.0	2.5	2	0	0	2	2	2	1	Sigma-54	interaction	domain
ATP-synt_ab	PF00006.25	gi|289596750|ref|YP_003483446.1|	-	0.0033	17.1	0.2	8	6.0	0.0	3.4	3	0	0	3	3	3	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
MCM	PF00493.23	gi|289596750|ref|YP_003483446.1|	-	0.0051	15.9	0.0	0.33	10.0	0.0	2.5	2	0	0	2	2	2	1	MCM	P-loop	domain
Guanylate_kin	PF00625.21	gi|289596750|ref|YP_003483446.1|	-	0.0059	16.3	0.3	45	3.7	0.0	4.4	3	2	2	5	5	5	0	Guanylate	kinase
T2SSE	PF00437.20	gi|289596750|ref|YP_003483446.1|	-	0.0088	15.1	0.1	1.9	7.4	0.0	3.1	3	1	1	4	4	3	1	Type	II/IV	secretion	system	protein
TniB	PF05621.11	gi|289596750|ref|YP_003483446.1|	-	0.012	15.0	0.0	5.1	6.5	0.0	3.1	2	1	1	3	3	3	0	Bacterial	TniB	protein
Cytidylate_kin2	PF13189.6	gi|289596750|ref|YP_003483446.1|	-	0.014	15.5	0.1	2.6	8.1	0.0	3.0	3	0	0	3	3	3	0	Cytidylate	kinase-like	family
CPT	PF07931.12	gi|289596750|ref|YP_003483446.1|	-	0.016	15.0	0.1	19	5.0	0.0	3.3	3	0	0	3	3	3	0	Chloramphenicol	phosphotransferase-like	protein
Cytidylate_kin	PF02224.18	gi|289596750|ref|YP_003483446.1|	-	0.024	14.4	0.1	8.3	6.1	0.0	2.5	2	0	0	2	2	2	0	Cytidylate	kinase
ResIII	PF04851.15	gi|289596750|ref|YP_003483446.1|	-	0.05	13.6	0.0	19	5.2	0.0	2.7	2	1	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
AAA_29	PF13555.6	gi|289596750|ref|YP_003483446.1|	-	0.057	13.2	0.0	11	5.9	0.0	2.4	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
Viral_helicase1	PF01443.18	gi|289596750|ref|YP_003483446.1|	-	0.07	12.9	0.0	2	8.1	0.0	2.4	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
SKI	PF01202.22	gi|289596750|ref|YP_003483446.1|	-	0.087	12.9	0.0	13	5.9	0.0	2.6	2	0	0	2	2	2	0	Shikimate	kinase
IPT	PF01745.16	gi|289596750|ref|YP_003483446.1|	-	0.18	11.2	0.1	16	4.8	0.0	2.4	2	0	0	2	2	2	0	Isopentenyl	transferase
AFG1_ATPase	PF03969.16	gi|289596750|ref|YP_003483446.1|	-	0.19	10.6	0.0	12	4.6	0.0	2.2	2	0	0	2	2	2	0	AFG1-like	ATPase
PRC	PF05239.16	gi|289596751|ref|YP_003483447.1|	-	8.3e-09	35.4	0.1	9.6e-09	35.2	0.1	1.1	1	0	0	1	1	1	1	PRC-barrel	domain
eRF1_2	PF03464.15	gi|289596752|ref|YP_003483448.1|	-	1.6e-45	154.7	0.5	3.5e-45	153.6	0.2	1.7	2	0	0	2	2	1	1	eRF1	domain	2
eRF1_3	PF03465.15	gi|289596752|ref|YP_003483448.1|	-	1.4e-33	115.8	0.1	5.2e-33	113.9	0.0	2.1	2	0	0	2	2	1	1	eRF1	domain	3
baeRF_family10	PF18854.1	gi|289596752|ref|YP_003483448.1|	-	3.3e-15	56.5	0.0	5.2e-15	55.9	0.0	1.3	1	0	0	1	1	1	1	Bacterial	archaeo-eukaryotic	release	factor	family	10
acVLRF1	PF18859.1	gi|289596752|ref|YP_003483448.1|	-	1.3e-14	54.7	0.0	4.6e-14	52.8	0.0	1.8	2	0	0	2	2	2	1	Actinobacteria/chloroflexi	VLRF1	release	factor
eRF1_1	PF03463.15	gi|289596752|ref|YP_003483448.1|	-	1e-13	51.4	0.0	1.6e-13	50.8	0.0	1.3	1	0	0	1	1	1	1	eRF1	domain	1
DUF4379	PF14311.6	gi|289596752|ref|YP_003483448.1|	-	0.00047	20.5	0.3	0.001	19.4	0.3	1.5	1	0	0	1	1	1	1	Probable	Zinc-ribbon	domain
Zn-ribbon_8	PF09723.10	gi|289596752|ref|YP_003483448.1|	-	0.0026	17.8	2.1	0.0047	17.0	0.7	2.1	2	0	0	2	2	2	1	Zinc	ribbon	domain
zf-ribbon_3	PF13248.6	gi|289596752|ref|YP_003483448.1|	-	0.0047	16.3	1.8	1.2	8.7	0.1	2.4	2	0	0	2	2	2	2	zinc-ribbon	domain
DZR	PF12773.7	gi|289596752|ref|YP_003483448.1|	-	0.02	14.9	0.3	0.036	14.1	0.3	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
zf-TFIIB	PF13453.6	gi|289596752|ref|YP_003483448.1|	-	0.021	14.2	4.0	0.043	13.1	4.0	1.6	1	0	0	1	1	1	0	Transcription	factor	zinc-finger
zf_UBZ	PF18439.1	gi|289596752|ref|YP_003483448.1|	-	0.021	14.4	3.2	0.41	10.3	0.2	2.4	2	0	0	2	2	2	0	Ubiquitin-Binding	Zinc	Finger
zinc_ribbon_2	PF13240.6	gi|289596752|ref|YP_003483448.1|	-	0.025	14.3	2.4	0.41	10.4	0.4	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
HypA	PF01155.19	gi|289596752|ref|YP_003483448.1|	-	0.029	14.4	0.1	0.053	13.5	0.1	1.4	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Nudix_N_2	PF14803.6	gi|289596752|ref|YP_003483448.1|	-	0.036	14.0	1.7	0.079	12.9	1.7	1.5	1	0	0	1	1	1	0	Nudix	N-terminal
Vps36-NZF-N	PF16988.5	gi|289596752|ref|YP_003483448.1|	-	0.097	12.1	0.3	0.19	11.1	0.3	1.4	1	0	0	1	1	1	0	Vacuolar	protein	sorting	36	NZF-N	zinc-finger	domain
YhfH	PF14149.6	gi|289596752|ref|YP_003483448.1|	-	0.1	12.6	8.7	1.8	8.6	0.9	3.3	2	1	1	3	3	3	0	YhfH-like	protein
Clr5	PF14420.6	gi|289596752|ref|YP_003483448.1|	-	0.13	12.5	0.1	1.2	9.4	0.0	2.4	2	0	0	2	2	2	0	Clr5	domain
DUF2256	PF10013.9	gi|289596752|ref|YP_003483448.1|	-	0.13	12.4	1.2	0.6	10.3	0.0	2.2	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2256)
zf-Mss51	PF13824.6	gi|289596752|ref|YP_003483448.1|	-	0.36	11.0	2.0	8.8	6.5	3.3	2.3	1	1	1	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
OrfB_Zn_ribbon	PF07282.11	gi|289596752|ref|YP_003483448.1|	-	0.39	10.7	1.4	0.64	10.0	0.3	1.9	2	0	0	2	2	1	0	Putative	transposase	DNA-binding	domain
zf-ISL3	PF14690.6	gi|289596752|ref|YP_003483448.1|	-	1.2	9.9	3.9	1.9	9.2	0.5	2.5	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Rad50_zn_hook	PF04423.14	gi|289596752|ref|YP_003483448.1|	-	1.8	8.5	4.7	3	7.8	0.0	3.3	2	1	1	3	3	3	0	Rad50	zinc	hook	motif
Rubredoxin_2	PF18073.1	gi|289596752|ref|YP_003483448.1|	-	3.7	7.4	5.7	0.83	9.4	0.6	2.2	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
Zn_ribbon_SprT	PF17283.2	gi|289596752|ref|YP_003483448.1|	-	5.1	7.1	8.4	0.32	10.9	0.6	2.6	3	0	0	3	3	3	0	SprT-like	zinc	ribbon	domain
UPF0547	PF10571.9	gi|289596752|ref|YP_003483448.1|	-	8.6	6.5	7.4	1.1e+02	3.0	7.4	2.2	1	1	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
Archease	PF01951.16	gi|289596753|ref|YP_003483449.1|	-	6.4e-42	143.1	0.0	7.1e-42	142.9	0.0	1.0	1	0	0	1	1	1	1	Archease	protein	family	(MTH1598/TM1083)
HAD_2	PF13419.6	gi|289596755|ref|YP_003483451.1|	-	8e-21	74.9	0.1	1.3e-20	74.2	0.1	1.5	1	1	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.26	gi|289596755|ref|YP_003483451.1|	-	1.3e-10	42.0	0.1	5.6e-09	36.6	0.1	2.2	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.6	gi|289596755|ref|YP_003483451.1|	-	6.7e-05	22.9	0.1	0.00014	21.9	0.1	1.5	1	0	0	1	1	1	1	HAD-hyrolase-like
HAD	PF12710.7	gi|289596755|ref|YP_003483451.1|	-	0.00089	19.7	0.0	0.0013	19.2	0.0	1.3	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Put_Phosphatase	PF06888.12	gi|289596755|ref|YP_003483451.1|	-	0.011	15.2	0.0	0.034	13.6	0.0	1.7	2	0	0	2	2	2	0	Putative	Phosphatase
ATE_C	PF04377.15	gi|289596755|ref|YP_003483451.1|	-	0.014	16.0	0.0	0.039	14.6	0.0	1.6	1	1	0	1	1	1	0	Arginine-tRNA-protein	transferase,	C	terminus
GP70	PF17429.2	gi|289596755|ref|YP_003483451.1|	-	0.11	12.3	0.0	0.24	11.3	0.0	1.5	1	0	0	1	1	1	0	Gene	product	70
Forkhead	PF00250.18	gi|289596755|ref|YP_003483451.1|	-	0.17	12.2	0.6	2.7	8.3	0.3	2.6	3	0	0	3	3	3	0	Forkhead	domain
CheF-arch	PF04283.12	gi|289596756|ref|YP_003483452.1|	-	0.00082	19.2	0.5	0.0093	15.7	0.5	2.3	1	1	0	1	1	1	1	Chemotaxis	signal	transduction	system	protein	F	from	archaea
HTH_45	PF14947.6	gi|289596756|ref|YP_003483452.1|	-	0.0018	18.2	0.5	0.0043	17.0	0.5	1.7	1	0	0	1	1	1	1	Winged	helix-turn-helix
MarR_2	PF12802.7	gi|289596756|ref|YP_003483452.1|	-	0.0079	16.1	0.0	0.013	15.4	0.0	1.3	1	0	0	1	1	1	1	MarR	family
GerE	PF00196.19	gi|289596756|ref|YP_003483452.1|	-	0.072	12.7	0.0	0.18	11.4	0.0	1.7	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
Response_reg	PF00072.24	gi|289596757|ref|YP_003483453.1|	-	7.5e-29	100.2	1.9	7.5e-29	100.2	1.9	1.5	2	0	0	2	2	2	1	Response	regulator	receiver	domain
OKR_DC_1_N	PF03709.15	gi|289596757|ref|YP_003483453.1|	-	0.011	16.0	0.3	0.034	14.4	0.1	2.0	2	0	0	2	2	2	0	Orn/Lys/Arg	decarboxylase,	N-terminal	domain
Glyco_trans_1_2	PF13524.6	gi|289596757|ref|YP_003483453.1|	-	0.026	14.9	0.0	0.068	13.6	0.0	1.7	1	0	0	1	1	1	0	Glycosyl	transferases	group	1
LAGLIDADG_WhiA	PF14527.6	gi|289596757|ref|YP_003483453.1|	-	0.046	13.8	2.7	0.41	10.8	0.3	2.7	2	2	1	3	3	3	0	WhiA	LAGLIDADG-like	domain
GH3	PF03321.13	gi|289596757|ref|YP_003483453.1|	-	0.073	11.9	0.1	0.13	11.1	0.1	1.4	1	1	0	1	1	1	0	GH3	auxin-responsive	promoter
LytR_C	PF13399.6	gi|289596757|ref|YP_003483453.1|	-	0.075	14.0	0.0	0.14	13.1	0.0	1.5	1	0	0	1	1	1	0	LytR	cell	envelope-related	transcriptional	attenuator
Cas_APE2256	PF09651.10	gi|289596757|ref|YP_003483453.1|	-	0.087	12.7	0.1	0.16	11.9	0.1	1.4	1	0	0	1	1	1	0	CRISPR-associated	protein	(Cas_APE2256)
Pathogen_betaC1	PF09593.10	gi|289596757|ref|YP_003483453.1|	-	0.26	11.2	3.0	5.3	7.0	0.0	2.5	1	1	1	2	2	2	0	Beta-satellite	pathogenicity	beta	C1	protein
Radical_SAM	PF04055.21	gi|289596758|ref|YP_003483454.1|	-	1.7e-13	51.3	0.0	3.7e-13	50.2	0.0	1.6	1	1	0	1	1	1	1	Radical	SAM	superfamily
DUF1848	PF08902.11	gi|289596758|ref|YP_003483454.1|	-	2.5e-08	34.0	5.9	0.00018	21.3	0.0	2.3	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF1848)
RuBisCO_large	PF00016.20	gi|289596759|ref|YP_003483455.1|	-	2.1e-101	339.1	0.7	2.6e-101	338.8	0.7	1.1	1	0	0	1	1	1	1	Ribulose	bisphosphate	carboxylase	large	chain,	catalytic	domain
RuBisCO_large_N	PF02788.16	gi|289596759|ref|YP_003483455.1|	-	1.6e-43	147.6	0.0	3.3e-43	146.7	0.0	1.5	1	0	0	1	1	1	1	Ribulose	bisphosphate	carboxylase	large	chain,	N-terminal	domain
DUF1104	PF06518.11	gi|289596759|ref|YP_003483455.1|	-	0.37	11.2	0.2	0.37	11.2	0.2	2.6	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1104)
Radical_SAM_C	PF16199.5	gi|289596760|ref|YP_003483456.1|	-	3.8e-31	107.0	0.5	1e-30	105.6	0.5	1.8	1	0	0	1	1	1	1	Radical_SAM	C-terminal	domain
Radical_SAM	PF04055.21	gi|289596760|ref|YP_003483456.1|	-	5.1e-21	75.8	0.1	2.8e-20	73.3	0.0	2.2	2	0	0	2	2	2	1	Radical	SAM	superfamily
Acetyltransf_1	PF00583.25	gi|289596760|ref|YP_003483456.1|	-	2.8e-06	27.5	0.2	8.2e-06	26.0	0.2	1.8	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.7	gi|289596760|ref|YP_003483456.1|	-	1.5e-05	24.9	0.0	3.3e-05	23.8	0.0	1.5	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.7	gi|289596760|ref|YP_003483456.1|	-	0.0027	18.1	0.1	0.0057	17.1	0.1	1.5	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
NUDIX	PF00293.28	gi|289596761|ref|YP_003483457.1|	-	1.1e-19	70.7	0.4	1.8e-19	70.1	0.0	1.6	2	0	0	2	2	2	1	NUDIX	domain
HTH_1	PF00126.27	gi|289596761|ref|YP_003483457.1|	-	4.8e-11	42.5	0.0	8.6e-11	41.6	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
NUDIX_4	PF14815.6	gi|289596761|ref|YP_003483457.1|	-	0.029	14.3	0.0	0.048	13.6	0.0	1.3	1	0	0	1	1	1	0	NUDIX	domain
HTH_45	PF14947.6	gi|289596761|ref|YP_003483457.1|	-	0.042	13.8	0.1	0.081	12.9	0.1	1.5	1	0	0	1	1	1	0	Winged	helix-turn-helix
KH_5	PF13184.6	gi|289596762|ref|YP_003483458.1|	-	5.5e-14	52.0	2.4	8.9e-14	51.3	1.0	1.9	2	0	0	2	2	2	1	NusA-like	KH	domain
KH_2	PF07650.17	gi|289596762|ref|YP_003483458.1|	-	4e-08	33.0	0.9	0.0014	18.4	0.2	2.1	1	1	1	2	2	2	2	KH	domain
KH_4	PF13083.6	gi|289596762|ref|YP_003483458.1|	-	6.2e-05	22.8	0.1	0.00014	21.7	0.1	1.6	1	0	0	1	1	1	1	KH	domain
DUF447	PF04289.12	gi|289596762|ref|YP_003483458.1|	-	0.021	14.6	0.3	0.039	13.7	0.3	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF447)
Ribosomal_L7Ae	PF01248.26	gi|289596763|ref|YP_003483459.1|	-	5e-17	61.4	0.2	1.2e-16	60.2	0.2	1.5	1	1	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
eRF1_3	PF03465.15	gi|289596763|ref|YP_003483459.1|	-	0.0023	18.4	0.0	0.0023	18.4	0.0	1.1	1	0	0	1	1	1	1	eRF1	domain	3
RNA_pol_Rpb1_5	PF04998.17	gi|289596764|ref|YP_003483460.1|	-	8.3e-54	182.8	10.7	1.5e-53	181.9	10.6	1.5	1	1	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	5
RNA_pol_Rpb1_1	PF04997.12	gi|289596765|ref|YP_003483461.1|	-	1.1e-104	350.2	0.0	1.5e-104	349.7	0.0	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	1
RNA_pol_Rpb1_2	PF00623.20	gi|289596765|ref|YP_003483461.1|	-	1.7e-68	230.0	0.0	2.8e-68	229.3	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	2
RNA_pol_Rpb1_3	PF04983.18	gi|289596765|ref|YP_003483461.1|	-	9.2e-30	103.6	0.0	3.3e-29	101.8	0.0	2.0	2	0	0	2	2	2	1	RNA	polymerase	Rpb1,	domain	3
RNA_pol_Rpb1_4	PF05000.17	gi|289596765|ref|YP_003483461.1|	-	5.7e-29	100.2	0.0	1.2e-28	99.2	0.0	1.6	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	4
RNA_pol_Rpb1_5	PF04998.17	gi|289596765|ref|YP_003483461.1|	-	8.1e-27	94.3	0.3	1.6e-26	93.3	0.1	1.6	2	0	0	2	2	2	1	RNA	polymerase	Rpb1,	domain	5
DUF3659	PF12396.8	gi|289596765|ref|YP_003483461.1|	-	0.054	13.4	2.1	0.082	12.8	0.4	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3659)
Zn-ribbon_8	PF09723.10	gi|289596765|ref|YP_003483461.1|	-	0.29	11.3	4.1	3.8	7.7	0.1	3.2	3	0	0	3	3	3	0	Zinc	ribbon	domain
RNA_pol_Rpb2_6	PF00562.28	gi|289596766|ref|YP_003483462.1|	-	4.3e-132	440.9	0.0	6.5e-132	440.3	0.0	1.3	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	6
RNA_pol_Rpb2_1	PF04563.15	gi|289596766|ref|YP_003483462.1|	-	2e-35	122.1	0.0	2.6e-17	63.0	0.0	2.2	1	1	1	2	2	2	2	RNA	polymerase	beta	subunit
RNA_pol_Rpb2_2	PF04561.14	gi|289596766|ref|YP_003483462.1|	-	2.2e-31	109.0	0.9	2.2e-31	109.0	0.9	1.7	2	0	0	2	2	1	1	RNA	polymerase	Rpb2,	domain	2
RNA_pol_Rpb2_3	PF04565.16	gi|289596766|ref|YP_003483462.1|	-	2.2e-25	88.6	0.1	4.1e-25	87.7	0.1	1.5	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	3
RNA_pol_Rpb2_7	PF04560.20	gi|289596766|ref|YP_003483462.1|	-	3e-25	88.4	0.0	7.3e-25	87.2	0.0	1.7	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	7
RNA_pol_Rpb2_4	PF04566.13	gi|289596766|ref|YP_003483462.1|	-	7.1e-21	74.3	0.5	7.1e-21	74.3	0.5	2.0	2	0	0	2	2	1	1	RNA	polymerase	Rpb2,	domain	4
RNA_pol_Rpb2_5	PF04567.17	gi|289596766|ref|YP_003483462.1|	-	3.3e-14	53.2	0.5	8.5e-14	51.9	0.5	1.7	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	5
DUF3268	PF11672.8	gi|289596766|ref|YP_003483462.1|	-	0.0073	16.6	0.6	0.5	10.7	0.0	2.8	2	1	1	3	3	3	1	zinc-finger-containing	domain
IBR	PF01485.21	gi|289596766|ref|YP_003483462.1|	-	0.017	15.4	0.7	5.6	7.3	0.0	2.4	2	0	0	2	2	2	0	IBR	domain,	a	half	RING-finger	domain
Terminase_GpA	PF05876.12	gi|289596766|ref|YP_003483462.1|	-	0.028	13.0	0.6	0.052	12.1	0.6	1.3	1	0	0	1	1	1	0	Phage	terminase	large	subunit	(GpA)
zf-RING_7	PF02591.15	gi|289596766|ref|YP_003483462.1|	-	0.08	13.1	3.5	0.74	10.1	0.1	3.4	3	0	0	3	3	3	0	C4-type	zinc	ribbon	domain
OrfB_Zn_ribbon	PF07282.11	gi|289596766|ref|YP_003483462.1|	-	0.096	12.6	4.2	1.1	9.2	0.1	2.5	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
A2L_zn_ribbon	PF08792.10	gi|289596766|ref|YP_003483462.1|	-	0.12	12.1	2.1	0.43	10.4	0.3	2.5	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
Zn_Tnp_IS1595	PF12760.7	gi|289596766|ref|YP_003483462.1|	-	0.12	12.3	6.0	7.2	6.7	0.0	2.8	2	1	0	2	2	2	0	Transposase	zinc-ribbon	domain
gpD	PF02925.16	gi|289596766|ref|YP_003483462.1|	-	0.13	12.2	0.1	0.84	9.6	0.0	2.1	2	0	0	2	2	2	0	Bacteriophage	scaffolding	protein	D
zinc_ribbon_4	PF13717.6	gi|289596766|ref|YP_003483462.1|	-	0.15	12.0	5.0	4.5	7.3	0.0	3.5	3	0	0	3	3	3	0	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.12	gi|289596766|ref|YP_003483462.1|	-	0.24	10.9	8.3	0.61	9.6	1.1	3.5	3	0	0	3	3	3	0	TFIIB	zinc-binding
Lar_restr_allev	PF14354.6	gi|289596766|ref|YP_003483462.1|	-	0.33	11.4	2.2	3.5	8.1	0.5	2.9	3	0	0	3	3	2	0	Restriction	alleviation	protein	Lar
Zn-ribbon_8	PF09723.10	gi|289596766|ref|YP_003483462.1|	-	0.4	10.8	7.0	27	5.0	0.2	3.4	3	0	0	3	3	3	0	Zinc	ribbon	domain
Ogr_Delta	PF04606.12	gi|289596766|ref|YP_003483462.1|	-	0.41	10.7	4.8	22	5.1	0.0	3.8	4	0	0	4	4	4	0	Ogr/Delta-like	zinc	finger
DUF1451	PF07295.11	gi|289596766|ref|YP_003483462.1|	-	3.3	7.8	5.6	6.7	6.7	0.2	3.2	3	0	0	3	3	3	0	Zinc-ribbon	containing	domain
Zn_ribbon_SprT	PF17283.2	gi|289596766|ref|YP_003483462.1|	-	6.4	6.8	6.9	8.9	6.3	0.9	2.9	2	1	0	2	2	2	0	SprT-like	zinc	ribbon	domain
zf-LITAF-like	PF10601.9	gi|289596766|ref|YP_003483462.1|	-	6.4	7.1	4.9	12	6.2	0.0	3.0	3	0	0	3	3	3	0	LITAF-like	zinc	ribbon	domain
zf-C2H2_4	PF13894.6	gi|289596766|ref|YP_003483462.1|	-	8	7.6	6.2	72	4.6	0.3	3.6	3	0	0	3	3	3	0	C2H2-type	zinc	finger
Zn_ribbon_recom	PF13408.6	gi|289596766|ref|YP_003483462.1|	-	8.1	7.0	10.2	44	4.7	0.0	4.3	3	1	1	4	4	4	0	Recombinase	zinc	beta	ribbon	domain
zf-ISL3	PF14690.6	gi|289596766|ref|YP_003483462.1|	-	8.9	7.1	6.8	33	5.2	0.3	3.5	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
RNA_pol_Rpb5_C	PF01191.19	gi|289596767|ref|YP_003483463.1|	-	3.5e-27	94.1	0.9	4.1e-27	93.8	0.9	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb5,	C-terminal	domain
DUF4062	PF13271.6	gi|289596767|ref|YP_003483463.1|	-	0.16	12.4	0.0	0.18	12.2	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4062)
Diphthami_syn_2	PF01902.17	gi|289596768|ref|YP_003483464.1|	-	8.2e-66	221.6	0.4	9.2e-66	221.5	0.4	1.0	1	0	0	1	1	1	1	Diphthamide	synthase
QueC	PF06508.13	gi|289596768|ref|YP_003483464.1|	-	4.9e-05	22.9	0.1	0.0001	21.8	0.0	1.6	1	1	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
ThiI	PF02568.14	gi|289596768|ref|YP_003483464.1|	-	0.0032	17.1	0.1	0.0097	15.5	0.0	1.8	2	1	0	2	2	2	1	Thiamine	biosynthesis	protein	(ThiI)
tRNA_Me_trans	PF03054.16	gi|289596768|ref|YP_003483464.1|	-	0.067	12.0	0.0	0.09	11.5	0.0	1.3	1	0	0	1	1	1	0	tRNA	methyl	transferase
PAPS_reduct	PF01507.19	gi|289596768|ref|YP_003483464.1|	-	0.082	12.9	0.1	0.29	11.2	0.0	2.0	2	1	0	2	2	2	0	Phosphoadenosine	phosphosulfate	reductase	family
DAGK_prokar	PF01219.19	gi|289596769|ref|YP_003483465.1|	-	4.3e-30	103.6	4.5	4.8e-30	103.4	4.5	1.0	1	0	0	1	1	1	1	Prokaryotic	diacylglycerol	kinase
NDUF_B4	PF07225.12	gi|289596769|ref|YP_003483465.1|	-	0.15	12.0	0.1	0.34	10.8	0.0	1.6	1	1	1	2	2	2	0	NADH-ubiquinone	oxidoreductase	B15	subunit	(NDUFB4)
DUF2892	PF11127.8	gi|289596769|ref|YP_003483465.1|	-	1.6	8.8	5.2	0.72	9.9	0.6	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2892)
Phage_holin_2_3	PF16080.5	gi|289596769|ref|YP_003483465.1|	-	2.2	8.1	6.6	0.14	12.0	1.4	1.7	2	0	0	2	2	2	0	Bacteriophage	holin	family	HP1
EamA	PF00892.20	gi|289596770|ref|YP_003483466.1|	-	1.3e-36	125.8	40.1	3.5e-22	79.1	15.6	2.0	2	0	0	2	2	2	2	EamA-like	transporter	family
TPT	PF03151.16	gi|289596770|ref|YP_003483466.1|	-	2.2e-06	27.2	19.2	0.0004	19.8	9.7	2.1	1	1	1	2	2	2	2	Triose-phosphate	Transporter	family
DUF2070	PF09843.9	gi|289596770|ref|YP_003483466.1|	-	1.7	6.8	36.7	0.0038	15.6	18.6	2.0	1	1	1	2	2	2	0	Predicted	membrane	protein	(DUF2070)
PMT_2	PF13231.6	gi|289596771|ref|YP_003483467.1|	-	0.0095	16.2	4.1	0.011	16.0	4.1	1.2	1	0	0	1	1	1	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
DUF2583	PF10762.9	gi|289596771|ref|YP_003483467.1|	-	0.18	12.3	4.3	0.24	11.9	4.3	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2583)
DUF2207	PF09972.9	gi|289596771|ref|YP_003483467.1|	-	0.31	9.7	5.9	0.37	9.5	5.9	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
Phage_holin_3_6	PF07332.11	gi|289596771|ref|YP_003483467.1|	-	0.38	10.8	3.6	0.47	10.5	3.6	1.0	1	0	0	1	1	1	0	Putative	Actinobacterial	Holin-X,	holin	superfamily	III
DUF3487	PF11990.8	gi|289596771|ref|YP_003483467.1|	-	0.67	9.9	3.4	0.76	9.7	3.4	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3487)
FAM70	PF14967.6	gi|289596771|ref|YP_003483467.1|	-	0.7	9.3	8.6	0.79	9.1	8.6	1.0	1	0	0	1	1	1	0	FAM70	protein
DUF1805	PF08827.11	gi|289596772|ref|YP_003483468.1|	-	2.9e-22	78.8	0.0	4.3e-22	78.2	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1805)
THUMP	PF02926.17	gi|289596773|ref|YP_003483469.1|	-	5.3e-05	23.4	1.3	0.00023	21.3	1.3	1.9	1	1	0	1	1	1	1	THUMP	domain
SMC_ScpB	PF04079.16	gi|289596774|ref|YP_003483470.1|	-	4.7e-38	130.3	0.6	5.5e-38	130.1	0.6	1.0	1	0	0	1	1	1	1	Segregation	and	condensation	complex	subunit	ScpB
MarR	PF01047.22	gi|289596774|ref|YP_003483470.1|	-	0.001	19.0	0.1	1.5	8.8	0.0	2.8	2	1	0	2	2	2	2	MarR	family
TrmB	PF01978.19	gi|289596774|ref|YP_003483470.1|	-	0.0017	18.2	1.0	0.57	10.1	0.0	2.4	2	1	0	2	2	2	2	Sugar-specific	transcriptional	regulator	TrmB
UPF0175	PF03683.13	gi|289596774|ref|YP_003483470.1|	-	0.006	16.3	0.0	0.013	15.2	0.0	1.5	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0175)
HTH_20	PF12840.7	gi|289596774|ref|YP_003483470.1|	-	0.07	13.2	0.0	3.7	7.7	0.0	2.3	2	0	0	2	2	2	0	Helix-turn-helix	domain
GARS_A	PF01071.19	gi|289596775|ref|YP_003483471.1|	-	4.9e-63	212.4	0.5	7.9e-63	211.8	0.5	1.3	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
GARS_N	PF02844.15	gi|289596775|ref|YP_003483471.1|	-	1.2e-22	80.5	0.1	3.8e-22	78.9	0.0	1.9	2	0	0	2	2	2	1	Phosphoribosylglycinamide	synthetase,	N	domain
GARS_C	PF02843.16	gi|289596775|ref|YP_003483471.1|	-	8.3e-11	42.0	0.3	2.2e-10	40.6	0.3	1.8	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	C	domain
ATP-grasp_3	PF02655.14	gi|289596775|ref|YP_003483471.1|	-	1.6e-06	28.2	0.0	0.00046	20.3	0.0	2.9	2	1	0	2	2	2	1	ATP-grasp	domain
ATP-grasp_4	PF13535.6	gi|289596775|ref|YP_003483471.1|	-	0.00077	19.1	0.1	0.013	15.1	0.0	2.7	3	0	0	3	3	3	1	ATP-grasp	domain
ATPgrasp_ST	PF14397.6	gi|289596775|ref|YP_003483471.1|	-	0.0031	16.8	0.0	0.0091	15.3	0.1	1.8	2	0	0	2	2	2	1	Sugar-transfer	associated	ATP-grasp
ATP-grasp	PF02222.22	gi|289596775|ref|YP_003483471.1|	-	0.05	13.2	0.1	0.11	12.0	0.1	1.6	1	0	0	1	1	1	0	ATP-grasp	domain
GSH-S_ATP	PF02955.16	gi|289596775|ref|YP_003483471.1|	-	0.051	13.0	0.1	0.24	10.8	0.0	2.2	3	0	0	3	3	3	0	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
MGS	PF02142.22	gi|289596775|ref|YP_003483471.1|	-	0.16	12.2	0.3	6.1	7.1	0.0	3.4	4	0	0	4	4	4	0	MGS-like	domain
PhosphMutase	PF10143.9	gi|289596776|ref|YP_003483472.1|	-	1.6e-56	190.8	0.0	2.4e-56	190.3	0.0	1.3	1	0	0	1	1	1	1	2,3-bisphosphoglycerate-independent	phosphoglycerate	mutase
Metalloenzyme	PF01676.18	gi|289596776|ref|YP_003483472.1|	-	7.9e-43	146.6	0.0	9.2e-43	146.4	0.0	1.0	1	0	0	1	1	1	1	Metalloenzyme	superfamily
Phosphodiest	PF01663.22	gi|289596776|ref|YP_003483472.1|	-	3.9e-07	30.0	0.0	4.2e-06	26.6	0.0	2.2	2	0	0	2	2	2	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
Alk_phosphatase	PF00245.20	gi|289596776|ref|YP_003483472.1|	-	4.4e-06	25.9	0.0	7.2e-06	25.2	0.0	1.2	1	0	0	1	1	1	1	Alkaline	phosphatase
Thiamine_BP	PF01910.17	gi|289596777|ref|YP_003483473.1|	-	1.7e-26	92.0	0.4	1.9e-26	91.8	0.4	1.0	1	0	0	1	1	1	1	Thiamine-binding	protein
Helicase_C	PF00271.31	gi|289596778|ref|YP_003483474.1|	-	3.2e-25	88.6	1.6	2.9e-22	79.1	0.1	3.2	3	0	0	3	3	3	2	Helicase	conserved	C-terminal	domain
ERCC4	PF02732.15	gi|289596778|ref|YP_003483474.1|	-	1.5e-24	87.0	1.4	4.1e-24	85.6	0.2	2.4	3	0	0	3	3	3	1	ERCC4	domain
DEAD	PF00270.29	gi|289596778|ref|YP_003483474.1|	-	2.9e-22	79.3	1.1	8.2e-22	77.8	0.2	2.3	2	1	0	2	2	2	1	DEAD/DEAH	box	helicase
ResIII	PF04851.15	gi|289596778|ref|YP_003483474.1|	-	3.4e-21	76.0	0.0	1.1e-20	74.4	0.0	1.9	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
HHH_5	PF14520.6	gi|289596778|ref|YP_003483474.1|	-	1.3e-09	38.5	0.1	8.1e-09	36.0	0.0	2.4	2	0	0	2	2	1	1	Helix-hairpin-helix	domain
HHH_2	PF12826.7	gi|289596778|ref|YP_003483474.1|	-	2.1e-08	34.1	0.1	1.2e-07	31.7	0.0	2.3	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
HHH	PF00633.23	gi|289596778|ref|YP_003483474.1|	-	6.7e-05	22.6	0.1	0.00025	20.7	0.1	2.1	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
SWI2_SNF2	PF18766.1	gi|289596778|ref|YP_003483474.1|	-	0.0011	18.6	0.0	0.0027	17.4	0.0	1.6	1	0	0	1	1	1	1	SWI2/SNF2	ATPase
DUF2075	PF09848.9	gi|289596778|ref|YP_003483474.1|	-	0.0015	17.8	0.0	0.005	16.1	0.0	1.8	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
RNA_pol_A_CTD	PF03118.15	gi|289596778|ref|YP_003483474.1|	-	0.0067	16.2	0.0	0.019	14.7	0.0	1.8	1	0	0	1	1	1	1	Bacterial	RNA	polymerase,	alpha	chain	C	terminal	domain
Ribosomal_L1	PF00687.21	gi|289596778|ref|YP_003483474.1|	-	0.016	14.9	0.1	0.048	13.4	0.1	1.8	1	0	0	1	1	1	0	Ribosomal	protein	L1p/L10e	family
SNF2_N	PF00176.23	gi|289596778|ref|YP_003483474.1|	-	0.023	13.4	0.1	0.023	13.4	0.1	1.8	2	1	0	2	2	2	0	SNF2	family	N-terminal	domain
AAA_30	PF13604.6	gi|289596778|ref|YP_003483474.1|	-	0.024	14.4	0.3	0.1	12.3	0.1	2.1	2	0	0	2	2	2	0	AAA	domain
Flavi_DEAD	PF07652.14	gi|289596778|ref|YP_003483474.1|	-	0.04	13.9	0.1	0.16	11.9	0.0	2.1	2	0	0	2	2	2	0	Flavivirus	DEAD	domain
Ham1p_like	PF01725.16	gi|289596778|ref|YP_003483474.1|	-	0.045	13.7	0.0	0.11	12.4	0.0	1.6	1	0	0	1	1	1	0	Ham1	family
5_3_exonuc	PF01367.20	gi|289596778|ref|YP_003483474.1|	-	0.24	12.0	5.5	72	4.1	0.0	5.0	5	1	1	6	6	5	0	5'-3'	exonuclease,	C-terminal	SAM	fold
MFS_1	PF07690.16	gi|289596779|ref|YP_003483475.1|	-	7.8e-15	54.6	38.6	1.5e-08	34.0	17.0	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Fe_dep_repress	PF01325.19	gi|289596780|ref|YP_003483476.1|	-	1.2e-21	76.7	3.0	2.1e-21	75.9	3.0	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Fe_dep_repr_C	PF02742.15	gi|289596780|ref|YP_003483476.1|	-	1.7e-16	60.1	0.3	3.4e-16	59.1	0.3	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
MarR_2	PF12802.7	gi|289596780|ref|YP_003483476.1|	-	1.2e-05	25.1	0.0	2.2e-05	24.2	0.0	1.6	1	1	0	1	1	1	1	MarR	family
MarR	PF01047.22	gi|289596780|ref|YP_003483476.1|	-	2.8e-05	24.0	0.0	6.9e-05	22.7	0.0	1.7	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.6	gi|289596780|ref|YP_003483476.1|	-	7.2e-05	22.3	0.0	0.00015	21.3	0.0	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.19	gi|289596780|ref|YP_003483476.1|	-	0.00028	20.7	0.2	0.00049	19.9	0.2	1.6	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
B-block_TFIIIC	PF04182.12	gi|289596780|ref|YP_003483476.1|	-	0.0012	19.0	0.0	0.0037	17.4	0.0	1.8	1	1	1	2	2	2	1	B-block	binding	subunit	of	TFIIIC
HTH_IclR	PF09339.10	gi|289596780|ref|YP_003483476.1|	-	0.0013	18.5	0.0	0.0029	17.4	0.0	1.6	2	0	0	2	2	1	1	IclR	helix-turn-helix	domain
Topoisom_bac	PF01131.20	gi|289596780|ref|YP_003483476.1|	-	0.0014	17.7	0.1	0.0021	17.1	0.1	1.2	1	0	0	1	1	1	1	DNA	topoisomerase
HTH_45	PF14947.6	gi|289596780|ref|YP_003483476.1|	-	0.0018	18.2	0.9	0.0029	17.6	0.9	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_Crp_2	PF13545.6	gi|289596780|ref|YP_003483476.1|	-	0.0028	17.6	0.0	0.0057	16.6	0.0	1.6	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
TFIIE_alpha	PF02002.17	gi|289596780|ref|YP_003483476.1|	-	0.0053	16.6	0.8	0.0085	15.9	0.3	1.7	1	1	0	1	1	1	1	TFIIE	alpha	subunit
GntR	PF00392.21	gi|289596780|ref|YP_003483476.1|	-	0.008	15.8	0.0	0.019	14.6	0.0	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
Rrf2	PF02082.20	gi|289596780|ref|YP_003483476.1|	-	0.0087	16.4	0.0	0.051	13.9	0.0	2.2	1	1	1	2	2	2	1	Transcriptional	regulator
HTH_5	PF01022.20	gi|289596780|ref|YP_003483476.1|	-	0.01	15.7	0.0	0.022	14.6	0.0	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
EspG	PF06872.11	gi|289596780|ref|YP_003483476.1|	-	0.011	14.4	0.0	0.012	14.2	0.0	1.1	1	0	0	1	1	1	0	EspG	protein
HTH_11	PF08279.12	gi|289596780|ref|YP_003483476.1|	-	0.012	15.6	0.2	0.04	13.9	0.0	2.0	2	0	0	2	2	2	0	HTH	domain
HTH_10	PF04967.12	gi|289596780|ref|YP_003483476.1|	-	0.016	15.0	0.0	0.084	12.7	0.0	2.2	2	0	0	2	2	2	0	HTH	DNA	binding	domain
SecA_PP_bind	PF01043.20	gi|289596780|ref|YP_003483476.1|	-	0.019	15.6	0.2	0.025	15.2	0.2	1.4	1	0	0	1	1	1	0	SecA	preprotein	cross-linking	domain
HTH_27	PF13463.6	gi|289596780|ref|YP_003483476.1|	-	0.023	15.2	0.8	0.063	13.8	0.1	2.1	2	2	1	3	3	2	0	Winged	helix	DNA-binding	domain
RNA_pol_Rpb1_6	PF04992.14	gi|289596780|ref|YP_003483476.1|	-	0.029	14.2	0.2	0.037	13.8	0.2	1.1	1	0	0	1	1	1	0	RNA	polymerase	Rpb1,	domain	6
FeoC	PF09012.10	gi|289596780|ref|YP_003483476.1|	-	0.033	14.3	0.0	0.11	12.6	0.0	1.8	1	1	1	2	2	2	0	FeoC	like	transcriptional	regulator
Mnd1	PF03962.15	gi|289596780|ref|YP_003483476.1|	-	0.035	14.4	1.4	0.047	14.0	0.1	1.9	2	0	0	2	2	2	0	Mnd1	HTH	domain
YdaS_antitoxin	PF15943.5	gi|289596780|ref|YP_003483476.1|	-	0.039	13.8	0.0	0.93	9.4	0.0	2.2	2	0	0	2	2	2	0	Putative	antitoxin	of	bacterial	toxin-antitoxin	system,	YdaS/YdaT
CobN-Mg_chel	PF02514.16	gi|289596780|ref|YP_003483476.1|	-	0.073	10.8	0.0	0.073	10.8	0.0	1.0	1	0	0	1	1	1	0	CobN/Magnesium	Chelatase
IF2_N	PF04760.15	gi|289596780|ref|YP_003483476.1|	-	0.22	11.4	2.9	1.2	9.0	0.1	3.1	3	1	0	3	3	3	0	Translation	initiation	factor	IF-2,	N-terminal	region
AF0941-like	PF14591.6	gi|289596780|ref|YP_003483476.1|	-	0.37	11.4	6.3	1.4	9.5	6.3	1.8	1	1	0	1	1	1	0	AF0941-like
BPL_LplA_LipB	PF03099.19	gi|289596781|ref|YP_003483477.1|	-	2e-13	50.3	0.0	3.3e-13	49.7	0.0	1.3	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
YqzH	PF14164.6	gi|289596781|ref|YP_003483477.1|	-	0.11	12.6	0.1	4.5	7.4	0.1	3.0	3	0	0	3	3	3	0	YqzH-like	protein
Lip_prot_lig_C	PF10437.9	gi|289596782|ref|YP_003483478.1|	-	2.4e-06	27.4	0.5	2.9e-06	27.2	0.5	1.2	1	0	0	1	1	1	1	Bacterial	lipoate	protein	ligase	C-terminus
Methyltr_RsmB-F	PF01189.17	gi|289596783|ref|YP_003483479.1|	-	7.8e-47	159.5	0.0	1.1e-46	159.0	0.0	1.2	1	0	0	1	1	1	1	16S	rRNA	methyltransferase	RsmB/F
Methyltr_RsmF_N	PF17125.5	gi|289596783|ref|YP_003483479.1|	-	2.3e-12	47.2	0.1	5.3e-12	46.1	0.1	1.6	1	0	0	1	1	1	1	N-terminal	domain	of	16S	rRNA	methyltransferase	RsmF
Methyltransf_31	PF13847.6	gi|289596783|ref|YP_003483479.1|	-	1.3e-06	28.3	0.0	1.9e-06	27.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|289596783|ref|YP_003483479.1|	-	0.0047	16.5	0.0	0.013	15.0	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	small	domain
PCMT	PF01135.19	gi|289596783|ref|YP_003483479.1|	-	0.011	15.5	0.0	0.018	14.8	0.0	1.3	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Ubie_methyltran	PF01209.18	gi|289596783|ref|YP_003483479.1|	-	0.013	14.8	0.8	0.055	12.8	0.0	2.1	3	0	0	3	3	3	0	ubiE/COQ5	methyltransferase	family
FtsJ	PF01728.19	gi|289596783|ref|YP_003483479.1|	-	0.03	14.4	0.0	0.047	13.8	0.0	1.3	1	0	0	1	1	1	0	FtsJ-like	methyltransferase
Methyltransf_25	PF13649.6	gi|289596783|ref|YP_003483479.1|	-	0.042	14.5	0.0	0.16	12.7	0.0	1.9	2	0	0	2	2	2	0	Methyltransferase	domain
RrnaAD	PF00398.20	gi|289596783|ref|YP_003483479.1|	-	0.085	11.9	0.0	0.11	11.5	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	RNA	adenine	dimethylase
Methyltranf_PUA	PF13636.6	gi|289596784|ref|YP_003483480.1|	-	5.3e-11	42.3	0.1	5.3e-11	42.3	0.1	1.9	2	0	0	2	2	2	1	RNA-binding	PUA-like	domain	of	methyltransferase	RsmF
ThiI	PF02568.14	gi|289596785|ref|YP_003483481.1|	-	1.2e-56	191.4	0.1	1.9e-56	190.8	0.1	1.3	1	0	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
THUMP	PF02926.17	gi|289596785|ref|YP_003483481.1|	-	6.8e-21	74.9	1.5	6.8e-21	74.9	1.5	2.0	2	0	0	2	2	2	1	THUMP	domain
QueC	PF06508.13	gi|289596785|ref|YP_003483481.1|	-	1.3e-05	24.8	0.1	0.00015	21.3	0.1	2.2	1	1	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
tRNA_Me_trans	PF03054.16	gi|289596785|ref|YP_003483481.1|	-	5.3e-05	22.2	0.0	0.00011	21.1	0.0	1.5	2	0	0	2	2	2	1	tRNA	methyl	transferase
ATP_bind_3	PF01171.20	gi|289596785|ref|YP_003483481.1|	-	0.00015	21.6	0.1	0.00035	20.4	0.1	1.6	1	1	0	1	1	1	1	PP-loop	family
PAPS_reduct	PF01507.19	gi|289596785|ref|YP_003483481.1|	-	0.00039	20.5	0.0	0.0066	16.5	0.0	2.1	2	0	0	2	2	2	1	Phosphoadenosine	phosphosulfate	reductase	family
NAD_synthase	PF02540.17	gi|289596785|ref|YP_003483481.1|	-	0.0019	17.4	0.0	0.0029	16.7	0.0	1.2	1	0	0	1	1	1	1	NAD	synthase
DUF4125	PF13526.6	gi|289596785|ref|YP_003483481.1|	-	0.032	13.9	0.1	0.38	10.3	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4125)
Focal_AT	PF03623.13	gi|289596785|ref|YP_003483481.1|	-	0.037	14.0	0.2	0.071	13.1	0.2	1.4	1	0	0	1	1	1	0	Focal	adhesion	targeting	region
Fib_alpha	PF08702.10	gi|289596786|ref|YP_003483482.1|	-	0.023	14.9	0.0	0.034	14.3	0.0	1.2	1	0	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
Peptidase_C9	PF01707.16	gi|289596787|ref|YP_003483483.1|	-	0.019	14.5	0.1	0.028	14.0	0.1	1.3	1	0	0	1	1	1	0	Peptidase	family	C9
SSF	PF00474.17	gi|289596788|ref|YP_003483484.1|	-	1.8e-80	270.8	26.1	3e-80	270.1	26.1	1.3	1	0	0	1	1	1	1	Sodium:solute	symporter	family
AA_permease_C	PF13906.6	gi|289596789|ref|YP_003483485.1|	-	0.002	18.1	1.2	0.0029	17.7	1.2	1.2	1	0	0	1	1	1	1	C-terminus	of	AA_permease
LapA_dom	PF06305.11	gi|289596789|ref|YP_003483485.1|	-	0.095	12.5	0.4	0.11	12.3	0.4	1.3	1	1	0	1	1	1	0	Lipopolysaccharide	assembly	protein	A	domain
AFOR_C	PF01314.18	gi|289596790|ref|YP_003483486.1|	-	2e-103	346.3	0.0	1.8e-101	340.0	0.0	2.2	1	1	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	domains	2	&	3
AFOR_N	PF02730.15	gi|289596790|ref|YP_003483486.1|	-	2e-76	256.3	0.2	4.6e-76	255.1	0.1	1.7	2	0	0	2	2	2	1	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
DHHA1	PF02272.19	gi|289596791|ref|YP_003483487.1|	-	2.6e-23	83.0	3.1	2.4e-22	79.9	0.6	2.8	3	0	0	3	3	3	1	DHHA1	domain
DHH	PF01368.20	gi|289596791|ref|YP_003483487.1|	-	0.014	15.6	0.1	0.038	14.2	0.0	1.8	2	0	0	2	2	2	0	DHH	family
HTH_22	PF13309.6	gi|289596791|ref|YP_003483487.1|	-	0.46	10.6	3.3	4.8	7.3	0.1	3.5	2	2	1	3	3	3	0	HTH	domain
eIF-5_eIF-2B	PF01873.17	gi|289596792|ref|YP_003483488.1|	-	4.7e-39	132.9	0.2	8e-39	132.1	0.2	1.3	1	0	0	1	1	1	1	Domain	found	in	IF2B/IF5
TRAM	PF01938.20	gi|289596792|ref|YP_003483488.1|	-	4e-13	49.2	1.3	8.8e-13	48.0	1.3	1.6	1	0	0	1	1	1	1	TRAM	domain
TF_Zn_Ribbon	PF08271.12	gi|289596792|ref|YP_003483488.1|	-	0.0025	17.3	0.7	0.0044	16.5	0.7	1.4	1	0	0	1	1	1	1	TFIIB	zinc-binding
DUF2441	PF10386.9	gi|289596792|ref|YP_003483488.1|	-	0.018	15.1	0.1	0.025	14.6	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2441)
TRAM_2	PF18693.1	gi|289596792|ref|YP_003483488.1|	-	0.044	14.0	0.6	14	5.9	0.1	2.6	2	0	0	2	2	2	0	TRAM	domain
A2L_zn_ribbon	PF08792.10	gi|289596792|ref|YP_003483488.1|	-	0.077	12.7	0.7	1.5	8.6	0.0	2.3	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
DUF35_N	PF12172.8	gi|289596792|ref|YP_003483488.1|	-	0.081	12.8	2.4	0.46	10.4	0.2	2.2	1	1	1	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf_C2H2_13	PF18508.1	gi|289596792|ref|YP_003483488.1|	-	0.086	12.4	0.5	4.5	7.0	0.0	2.3	2	0	0	2	2	2	0	Zinc	finger	domain
Nudix_N_2	PF14803.6	gi|289596792|ref|YP_003483488.1|	-	0.094	12.7	2.1	0.3	11.0	2.1	1.8	1	0	0	1	1	1	0	Nudix	N-terminal
Lar_restr_allev	PF14354.6	gi|289596792|ref|YP_003483488.1|	-	0.15	12.5	0.7	0.83	10.1	0.8	1.9	1	1	1	2	2	2	0	Restriction	alleviation	protein	Lar
GATA	PF00320.27	gi|289596792|ref|YP_003483488.1|	-	0.18	11.5	0.2	0.29	10.8	0.2	1.3	1	0	0	1	1	1	0	GATA	zinc	finger
PIN_9	PF18477.1	gi|289596793|ref|YP_003483489.1|	-	4.7e-25	88.2	0.4	5.3e-25	88.0	0.4	1.0	1	0	0	1	1	1	1	PIN	like	domain
PIN	PF01850.21	gi|289596793|ref|YP_003483489.1|	-	7.8e-05	23.2	0.1	9.4e-05	22.9	0.1	1.0	1	0	0	1	1	1	1	PIN	domain
Fcf1	PF04900.12	gi|289596793|ref|YP_003483489.1|	-	0.00012	22.4	0.0	0.00046	20.5	0.0	1.8	1	1	0	1	1	1	1	Fcf1
PIN_4	PF13638.6	gi|289596793|ref|YP_003483489.1|	-	0.0013	19.0	0.0	0.0029	17.9	0.0	1.6	1	1	0	1	1	1	1	PIN	domain
DUF5615	PF18480.1	gi|289596793|ref|YP_003483489.1|	-	0.0024	17.6	0.0	0.0037	17.0	0.0	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF5615)
PIN_5	PF08745.11	gi|289596793|ref|YP_003483489.1|	-	0.027	13.9	0.0	0.092	12.2	0.0	1.7	1	1	1	2	2	2	0	PINc	domain	ribonuclease
DUF4962	PF16332.5	gi|289596793|ref|YP_003483489.1|	-	0.067	11.7	0.1	0.071	11.6	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4962)
RNase_Zc3h12a	PF11977.8	gi|289596793|ref|YP_003483489.1|	-	0.073	12.8	0.1	0.098	12.4	0.1	1.4	1	1	0	1	1	1	0	Zc3h12a-like	Ribonuclease	NYN	domain
CTP-dep_RFKase	PF01982.16	gi|289596794|ref|YP_003483490.1|	-	5.3e-41	139.5	0.3	1.1e-40	138.5	0.1	1.6	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF120
MarR_2	PF12802.7	gi|289596794|ref|YP_003483490.1|	-	0.00017	21.4	0.0	0.00039	20.3	0.0	1.5	1	0	0	1	1	1	1	MarR	family
HTH_20	PF12840.7	gi|289596794|ref|YP_003483490.1|	-	0.00063	19.8	0.0	0.0011	19.0	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.6	gi|289596794|ref|YP_003483490.1|	-	0.0017	17.9	0.0	0.0072	15.9	0.0	2.0	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.22	gi|289596794|ref|YP_003483490.1|	-	0.0073	16.2	0.0	0.02	14.8	0.0	1.7	1	0	0	1	1	1	1	MarR	family
HTH_1	PF00126.27	gi|289596794|ref|YP_003483490.1|	-	0.011	15.7	0.0	0.02	14.8	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
HTH_11	PF08279.12	gi|289596794|ref|YP_003483490.1|	-	0.013	15.5	0.1	0.13	12.3	0.0	2.3	2	0	0	2	2	2	0	HTH	domain
HTH_Crp_2	PF13545.6	gi|289596794|ref|YP_003483490.1|	-	0.032	14.2	0.0	0.057	13.4	0.0	1.4	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
HTH_AsnC-type	PF13404.6	gi|289596794|ref|YP_003483490.1|	-	0.046	13.6	0.0	0.11	12.3	0.0	1.7	1	1	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
HTH_34	PF13601.6	gi|289596794|ref|YP_003483490.1|	-	0.047	13.9	0.0	0.41	10.9	0.0	2.3	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
TrmB	PF01978.19	gi|289596794|ref|YP_003483490.1|	-	0.075	12.9	0.0	0.32	10.9	0.0	2.0	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
PyrI	PF01948.18	gi|289596795|ref|YP_003483491.1|	-	3e-31	107.5	5.6	3e-31	107.5	5.6	1.8	2	0	0	2	2	2	1	Aspartate	carbamoyltransferase	regulatory	chain,	allosteric	domain
PyrI_C	PF02748.15	gi|289596795|ref|YP_003483491.1|	-	6.1e-19	67.7	4.0	6.1e-19	67.7	4.0	1.7	2	0	0	2	2	2	1	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
OTCace_N	PF02729.21	gi|289596796|ref|YP_003483492.1|	-	9e-50	168.5	0.0	1.5e-48	164.6	0.0	2.1	2	0	0	2	2	2	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
OTCace	PF00185.24	gi|289596796|ref|YP_003483492.1|	-	3.8e-34	118.1	0.0	5.4e-34	117.5	0.0	1.2	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
DHH	PF01368.20	gi|289596797|ref|YP_003483493.1|	-	4.4e-11	42.9	0.2	8e-11	42.1	0.2	1.4	1	0	0	1	1	1	1	DHH	family
DHHA1	PF02272.19	gi|289596797|ref|YP_003483493.1|	-	3e-07	30.9	0.1	5.8e-07	30.0	0.1	1.5	1	0	0	1	1	1	1	DHHA1	domain
DUF3641	PF12345.8	gi|289596797|ref|YP_003483493.1|	-	0.13	12.3	0.1	0.3	11.1	0.1	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3641)
Prefoldin_2	PF01920.20	gi|289596798|ref|YP_003483494.1|	-	8.8e-23	80.3	14.6	9.7e-23	80.2	14.6	1.0	1	0	0	1	1	1	1	Prefoldin	subunit
DUF1664	PF07889.12	gi|289596798|ref|YP_003483494.1|	-	0.018	15.1	5.1	0.098	12.7	0.5	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
DUF4164	PF13747.6	gi|289596798|ref|YP_003483494.1|	-	0.02	15.2	6.0	0.15	12.4	0.4	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4164)
GAS	PF13851.6	gi|289596798|ref|YP_003483494.1|	-	0.023	14.0	18.0	0.053	12.9	18.0	1.5	1	1	0	1	1	1	0	Growth-arrest	specific	micro-tubule	binding
DUF4407	PF14362.6	gi|289596798|ref|YP_003483494.1|	-	0.029	13.7	2.4	0.033	13.5	2.4	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
FlaC_arch	PF05377.11	gi|289596798|ref|YP_003483494.1|	-	0.073	13.5	2.5	0.073	13.5	2.5	2.4	2	1	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
SNAD3	PF18749.1	gi|289596798|ref|YP_003483494.1|	-	0.1	11.7	2.4	0.12	11.5	2.4	1.0	1	0	0	1	1	1	0	Secreted	Novel	AID/APOBEC-like	Deaminase	3
TPR_MLP1_2	PF07926.12	gi|289596798|ref|YP_003483494.1|	-	0.11	12.5	15.7	0.89	9.6	1.9	2.1	2	0	0	2	2	2	0	TPR/MLP1/MLP2-like	protein
Prefoldin	PF02996.17	gi|289596798|ref|YP_003483494.1|	-	0.21	11.5	14.6	0.14	12.0	5.6	2.5	1	1	1	2	2	2	0	Prefoldin	subunit
ABC_tran_CTD	PF16326.5	gi|289596798|ref|YP_003483494.1|	-	0.3	11.3	15.2	0.57	10.5	7.7	2.9	1	1	1	2	2	2	0	ABC	transporter	C-terminal	domain
DUF390	PF04094.14	gi|289596798|ref|YP_003483494.1|	-	0.37	9.0	2.6	0.44	8.8	2.6	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF390)
YojJ	PF10372.9	gi|289596798|ref|YP_003483494.1|	-	0.45	10.6	5.2	2.2	8.4	0.3	2.6	2	1	0	2	2	2	0	Bacterial	membrane-spanning	protein	N-terminus
Nsp1_C	PF05064.13	gi|289596798|ref|YP_003483494.1|	-	0.45	10.3	10.7	0.1	12.4	2.8	2.1	2	0	0	2	2	2	0	Nsp1-like	C-terminal	region
Tektin	PF03148.14	gi|289596798|ref|YP_003483494.1|	-	0.52	9.0	11.8	0.37	9.5	2.3	2.1	2	0	0	2	2	2	0	Tektin	family
DUF4795	PF16043.5	gi|289596798|ref|YP_003483494.1|	-	0.53	9.9	14.8	0.34	10.5	1.8	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4795)
DUF773	PF05600.12	gi|289596798|ref|YP_003483494.1|	-	1	8.0	10.1	0.29	9.8	1.2	2.1	2	0	0	2	2	2	0	CDK5	regulatory	subunit-associated	protein	3
FlxA	PF14282.6	gi|289596798|ref|YP_003483494.1|	-	1.7	8.7	14.7	0.93	9.5	2.7	2.3	2	1	0	2	2	2	0	FlxA-like	protein
HMMR_N	PF15905.5	gi|289596798|ref|YP_003483494.1|	-	2.4	7.5	18.1	25	4.2	18.1	1.9	1	1	0	1	1	1	0	Hyaluronan	mediated	motility	receptor	N-terminal
UPF0242	PF06785.11	gi|289596798|ref|YP_003483494.1|	-	2.6	8.1	17.5	4.8	7.2	17.5	1.4	1	1	0	1	1	1	0	Uncharacterised	protein	family	(UPF0242)	N-terminus
BRI3BP	PF14965.6	gi|289596798|ref|YP_003483494.1|	-	3.1	7.3	4.3	1.1	8.8	0.3	1.9	2	0	0	2	2	2	0	Negative	regulator	of	p53/TP53
DUF3287	PF11690.8	gi|289596798|ref|YP_003483494.1|	-	3.3	7.5	6.5	1.5	8.5	2.4	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3287)
DUF4200	PF13863.6	gi|289596798|ref|YP_003483494.1|	-	3.3	8.1	19.3	6.2	7.3	1.7	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4200)
EIAV_Rev	PF11129.8	gi|289596798|ref|YP_003483494.1|	-	3.5	7.8	9.8	2.6	8.2	2.6	2.2	1	1	1	2	2	2	0	Rev	protein	of	equine	infectious	anaemia	virus
DUF3450	PF11932.8	gi|289596798|ref|YP_003483494.1|	-	8.4	5.6	15.6	3.3	6.9	2.5	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3450)
DUF724	PF05266.14	gi|289596798|ref|YP_003483494.1|	-	9.2	6.0	13.1	14	5.5	13.1	1.2	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF724)
Pcc1	PF09341.10	gi|289596799|ref|YP_003483495.1|	-	4e-07	30.1	0.0	5e-07	29.8	0.0	1.1	1	0	0	1	1	1	1	Transcription	factor	Pcc1
DUF3240	PF11582.8	gi|289596799|ref|YP_003483495.1|	-	0.072	13.2	0.0	0.086	13.0	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3240)
polyprenyl_synt	PF00348.17	gi|289596800|ref|YP_003483496.1|	-	5.2e-60	202.7	0.0	7.4e-60	202.2	0.0	1.1	1	0	0	1	1	1	1	Polyprenyl	synthetase
zf-CCCH_6	PF18585.1	gi|289596800|ref|YP_003483496.1|	-	0.027	14.4	0.9	8.9	6.3	0.1	3.8	4	0	0	4	4	4	0	Chromatin	remodeling	factor	Mit1	C-terminal	Zn	finger	2
Ribosomal_L15e	PF00827.17	gi|289596801|ref|YP_003483497.1|	-	6.5e-85	283.7	12.8	7.3e-85	283.5	12.8	1.0	1	0	0	1	1	1	1	Ribosomal	L15
12TM_1	PF09847.9	gi|289596802|ref|YP_003483498.1|	-	6.6e-60	203.5	64.9	7.5e-60	203.3	64.9	1.0	1	0	0	1	1	1	1	Membrane	protein	of	12	TMs
ABC_tran	PF00005.27	gi|289596803|ref|YP_003483499.1|	-	1.1e-27	97.2	0.0	1.9e-27	96.4	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.6	gi|289596803|ref|YP_003483499.1|	-	1.1e-13	51.6	0.6	6.8e-07	29.4	0.1	2.2	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_23	PF13476.6	gi|289596803|ref|YP_003483499.1|	-	2.4e-05	24.9	1.0	6.4e-05	23.5	1.0	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.6	gi|289596803|ref|YP_003483499.1|	-	0.003	17.3	0.1	0.0063	16.2	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA	PF00004.29	gi|289596803|ref|YP_003483499.1|	-	0.0096	16.3	0.5	0.049	14.0	0.2	2.3	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_15	PF13175.6	gi|289596803|ref|YP_003483499.1|	-	0.012	15.3	4.0	0.2	11.4	0.1	2.9	2	1	0	3	3	3	0	AAA	ATPase	domain
SMC_N	PF02463.19	gi|289596803|ref|YP_003483499.1|	-	0.051	13.0	0.3	1.4	8.3	0.1	2.3	2	0	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
Rad17	PF03215.15	gi|289596803|ref|YP_003483499.1|	-	0.052	13.5	0.1	0.14	12.0	0.0	1.8	2	0	0	2	2	2	0	Rad17	P-loop	domain
AAA_22	PF13401.6	gi|289596803|ref|YP_003483499.1|	-	0.085	13.1	0.6	1.7	8.9	0.4	2.4	1	1	0	1	1	1	0	AAA	domain
G-alpha	PF00503.20	gi|289596803|ref|YP_003483499.1|	-	0.1	11.7	0.1	1.6	7.8	0.0	2.1	2	0	0	2	2	2	0	G-protein	alpha	subunit
AAA_33	PF13671.6	gi|289596803|ref|YP_003483499.1|	-	0.12	12.5	0.0	0.28	11.3	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
PBECR2	PF18810.1	gi|289596803|ref|YP_003483499.1|	-	0.14	12.5	0.0	0.26	11.6	0.0	1.5	1	0	0	1	1	1	0	phage-Barnase-EndoU-ColicinE5/D-RelE	like	nuclease2
AAA_30	PF13604.6	gi|289596803|ref|YP_003483499.1|	-	0.21	11.3	0.0	0.62	9.7	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
Peptidase_S9	PF00326.21	gi|289596804|ref|YP_003483500.1|	-	4e-57	193.1	0.0	5.7e-57	192.6	0.0	1.2	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
Peptidase_S9_N	PF02897.15	gi|289596804|ref|YP_003483500.1|	-	2.3e-21	76.1	0.5	2.9e-20	72.5	0.3	2.4	2	1	0	2	2	2	1	Prolyl	oligopeptidase,	N-terminal	beta-propeller	domain
Hydrolase_4	PF12146.8	gi|289596804|ref|YP_003483500.1|	-	0.0018	17.6	0.0	0.0066	15.7	0.0	1.7	2	0	0	2	2	2	1	Serine	aminopeptidase,	S33
Abhydrolase_1	PF00561.20	gi|289596804|ref|YP_003483500.1|	-	0.03	14.0	0.0	10	5.7	0.0	2.2	1	1	0	2	2	2	0	alpha/beta	hydrolase	fold
Peptidase_S15	PF02129.18	gi|289596804|ref|YP_003483500.1|	-	0.046	13.3	0.0	0.98	8.9	0.0	2.2	1	1	1	2	2	2	0	X-Pro	dipeptidyl-peptidase	(S15	family)
PAD	PF03068.15	gi|289596804|ref|YP_003483500.1|	-	0.13	11.3	0.0	0.2	10.6	0.0	1.2	1	0	0	1	1	1	0	Protein-arginine	deiminase	(PAD)
Peptidase_S28	PF05577.12	gi|289596804|ref|YP_003483500.1|	-	0.2	10.4	0.0	0.32	9.7	0.0	1.2	1	0	0	1	1	1	0	Serine	carboxypeptidase	S28
HD	PF01966.22	gi|289596805|ref|YP_003483501.1|	-	2.1e-12	47.3	0.3	8.4e-12	45.4	0.3	2.2	1	1	0	1	1	1	1	HD	domain
HDOD	PF08668.12	gi|289596805|ref|YP_003483501.1|	-	0.033	13.7	0.0	0.068	12.6	0.0	1.5	1	0	0	1	1	1	0	HDOD	domain
Cpn60_TCP1	PF00118.24	gi|289596806|ref|YP_003483502.1|	-	1.8e-186	620.6	22.2	2.1e-186	620.4	22.2	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
Phage_tube	PF04985.14	gi|289596806|ref|YP_003483502.1|	-	0.0019	17.9	1.1	0.17	11.6	0.0	2.7	3	0	0	3	3	3	2	Phage	tail	tube	protein	FII
Dak2	PF02734.17	gi|289596806|ref|YP_003483502.1|	-	0.048	13.6	0.0	0.048	13.6	0.0	2.9	2	1	1	3	3	3	0	DAK2	domain
NES_C_h	PF18208.1	gi|289596806|ref|YP_003483502.1|	-	0.14	12.4	2.6	0.56	10.5	1.2	2.5	1	1	1	2	2	2	0	Nicking	enzyme	C-terminal	middle	helical	domain
SPOUT_MTase	PF02590.17	gi|289596807|ref|YP_003483503.1|	-	4.5e-26	91.7	0.3	1.7e-21	76.8	0.0	2.0	1	1	1	2	2	2	2	Predicted	SPOUT	methyltransferase
Radical_SAM	PF04055.21	gi|289596808|ref|YP_003483504.1|	-	3.5e-18	66.6	0.0	1e-17	65.0	0.0	1.8	2	0	0	2	2	2	1	Radical	SAM	superfamily
B12-binding	PF02310.19	gi|289596808|ref|YP_003483504.1|	-	0.0051	16.8	0.0	0.015	15.3	0.0	1.8	1	1	0	1	1	1	1	B12	binding	domain
TraB	PF01963.17	gi|289596809|ref|YP_003483505.1|	-	1.9e-13	50.9	1.5	2.5e-11	44.0	1.5	2.5	1	1	0	1	1	1	1	TraB	family
Scramblase	PF03803.15	gi|289596809|ref|YP_003483505.1|	-	0.0038	16.6	0.1	0.0059	15.9	0.1	1.3	1	0	0	1	1	1	1	Scramblase
T2SS-T3SS_pil_N	PF13629.6	gi|289596809|ref|YP_003483505.1|	-	0.038	13.7	0.1	0.087	12.6	0.1	1.6	1	0	0	1	1	1	0	Pilus	formation	protein	N	terminal	region
DarA_N	PF18788.1	gi|289596809|ref|YP_003483505.1|	-	0.13	12.4	1.7	0.2	11.7	1.0	1.5	1	1	0	1	1	1	0	Defence	against	restriction	A	N-terminal
DUF2680	PF10925.8	gi|289596809|ref|YP_003483505.1|	-	0.27	11.2	0.1	0.27	11.2	0.1	2.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2680)
FTCD_N	PF07837.12	gi|289596810|ref|YP_003483506.1|	-	2.4e-74	248.9	0.0	6.7e-74	247.5	0.0	1.8	1	0	0	1	1	1	1	Formiminotransferase	domain,	N-terminal	subdomain
FTCD_C	PF04961.12	gi|289596810|ref|YP_003483506.1|	-	1.1e-68	230.6	4.7	1.1e-68	230.6	4.7	1.7	2	0	0	2	2	2	1	Formiminotransferase-cyclodeaminase
FTCD	PF02971.14	gi|289596810|ref|YP_003483506.1|	-	1.9e-56	190.1	0.0	3.7e-56	189.2	0.0	1.5	1	0	0	1	1	1	1	Formiminotransferase	domain
tRNA_SAD	PF07973.14	gi|289596811|ref|YP_003483507.1|	-	2.5e-11	43.5	0.2	5.7e-11	42.3	0.2	1.7	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
tRNA-synt_2c	PF01411.19	gi|289596811|ref|YP_003483507.1|	-	3.1e-10	39.2	0.1	8.1e-10	37.8	0.0	1.6	2	0	0	2	2	2	1	tRNA	synthetases	class	II	(A)
Pepsin-I3	PF06394.13	gi|289596811|ref|YP_003483507.1|	-	0.11	12.7	0.0	2.1	8.6	0.0	2.4	2	0	0	2	2	2	0	Pepsin	inhibitor-3-like	repeated	domain
ATP-synt_D	PF01813.17	gi|289596812|ref|YP_003483508.1|	-	3.7e-56	190.1	11.7	4.2e-56	189.9	11.7	1.0	1	0	0	1	1	1	1	ATP	synthase	subunit	D
DUF848	PF05852.11	gi|289596812|ref|YP_003483508.1|	-	0.56	10.3	5.3	0.28	11.3	1.3	2.1	2	0	0	2	2	2	0	Gammaherpesvirus	protein	of	unknown	function	(DUF848)
OMPdecase	PF00215.24	gi|289596814|ref|YP_003483510.1|	-	2.4e-38	132.0	2.9	3.1e-38	131.6	2.9	1.1	1	0	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
Ribul_P_3_epim	PF00834.19	gi|289596814|ref|YP_003483510.1|	-	0.0069	15.8	1.4	0.013	14.9	1.4	1.4	1	1	0	1	1	1	1	Ribulose-phosphate	3	epimerase	family
PA	PF02225.22	gi|289596814|ref|YP_003483510.1|	-	0.027	14.5	1.8	1.8	8.6	0.2	2.8	1	1	1	2	2	2	0	PA	domain
Lactamase_B	PF00753.27	gi|289596815|ref|YP_003483511.1|	-	4.4e-08	33.4	0.0	5.4e-08	33.1	0.0	1.2	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.7	gi|289596815|ref|YP_003483511.1|	-	0.00013	21.6	0.0	0.00018	21.1	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
PadR	PF03551.14	gi|289596816|ref|YP_003483512.1|	-	1.4e-15	57.0	0.4	7.1e-15	54.7	0.1	2.0	2	0	0	2	2	2	1	Transcriptional	regulator	PadR-like	family
DUF1495	PF07381.11	gi|289596816|ref|YP_003483512.1|	-	0.0011	18.7	0.0	0.003	17.4	0.0	1.6	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain	(DUF1495)
DUF4364	PF14277.6	gi|289596816|ref|YP_003483512.1|	-	0.0015	18.3	1.0	0.0038	17.0	1.0	1.8	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
HTH_45	PF14947.6	gi|289596816|ref|YP_003483512.1|	-	0.0018	18.2	1.7	0.0064	16.4	0.1	2.5	2	1	1	3	3	3	1	Winged	helix-turn-helix
DUF2513	PF10711.9	gi|289596816|ref|YP_003483512.1|	-	0.0029	17.9	0.8	0.0062	16.8	0.0	1.8	2	0	0	2	2	2	1	Hypothetical	protein	(DUF2513)
YjcQ	PF09639.10	gi|289596816|ref|YP_003483512.1|	-	0.005	17.0	1.9	0.0072	16.5	0.2	2.1	2	0	0	2	2	2	1	YjcQ	protein
HTH_34	PF13601.6	gi|289596816|ref|YP_003483512.1|	-	0.0064	16.6	0.0	0.012	15.8	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
Phe_tRNA-synt_N	PF02912.18	gi|289596816|ref|YP_003483512.1|	-	0.016	15.1	0.4	0.016	15.1	0.4	1.9	2	0	0	2	2	2	0	Aminoacyl	tRNA	synthetase	class	II,	N-terminal	domain
HTH_27	PF13463.6	gi|289596816|ref|YP_003483512.1|	-	0.11	13.0	0.1	1.4	9.4	0.0	2.3	2	1	0	2	2	2	0	Winged	helix	DNA-binding	domain
MatE	PF01554.18	gi|289596817|ref|YP_003483513.1|	-	1.6e-67	226.1	44.0	4.7e-41	140.1	10.7	3.0	3	0	0	3	3	3	2	MatE
Polysacc_synt_C	PF14667.6	gi|289596817|ref|YP_003483513.1|	-	4.6e-13	49.5	15.1	4.6e-13	49.5	15.1	5.0	3	2	1	4	4	4	2	Polysaccharide	biosynthesis	C-terminal	domain
O-antigen_lig	PF13425.6	gi|289596818|ref|YP_003483514.1|	-	0.00017	20.5	2.8	0.00023	20.1	2.6	1.3	1	1	0	1	1	1	1	O-antigen	ligase	like	membrane	protein
DUF4834	PF16118.5	gi|289596818|ref|YP_003483514.1|	-	0.00053	20.9	2.6	0.00053	20.9	2.6	1.8	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4834)
DUF4199	PF13858.6	gi|289596818|ref|YP_003483514.1|	-	0.0013	19.1	11.7	0.0018	18.7	10.9	1.8	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF4199)
UPF0242	PF06785.11	gi|289596818|ref|YP_003483514.1|	-	0.0028	17.8	8.0	0.0038	17.4	7.9	1.4	1	1	0	1	1	1	1	Uncharacterised	protein	family	(UPF0242)	N-terminus
DUF4407	PF14362.6	gi|289596818|ref|YP_003483514.1|	-	0.0042	16.5	3.3	0.0042	16.5	3.3	1.8	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4407)
CLN3	PF02487.17	gi|289596818|ref|YP_003483514.1|	-	0.021	13.9	0.1	0.028	13.5	0.1	1.1	1	0	0	1	1	1	0	CLN3	protein
CemA	PF03040.14	gi|289596818|ref|YP_003483514.1|	-	0.059	13.3	3.0	0.075	13.0	3.0	1.1	1	0	0	1	1	1	0	CemA	family
SID-1_RNA_chan	PF13965.6	gi|289596818|ref|YP_003483514.1|	-	0.67	8.3	3.2	0.23	9.8	0.8	1.4	1	1	0	1	1	1	0	dsRNA-gated	channel	SID-1
DUF1517	PF07466.11	gi|289596818|ref|YP_003483514.1|	-	6.8	6.8	10.1	8.7	6.4	10.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1517)
ATP_bind_3	PF01171.20	gi|289596819|ref|YP_003483515.1|	-	9.2e-14	51.6	0.0	1.6e-13	50.8	0.0	1.4	1	0	0	1	1	1	1	PP-loop	family
RecR	PF02132.15	gi|289596819|ref|YP_003483515.1|	-	0.00021	20.8	2.6	0.0039	16.7	0.8	2.7	2	0	0	2	2	2	1	RecR	protein
NAD_synthase	PF02540.17	gi|289596819|ref|YP_003483515.1|	-	0.0019	17.3	0.0	0.0036	16.4	0.0	1.4	1	0	0	1	1	1	1	NAD	synthase
ThiI	PF02568.14	gi|289596819|ref|YP_003483515.1|	-	0.0036	16.9	0.1	0.0096	15.5	0.0	1.6	2	0	0	2	2	2	1	Thiamine	biosynthesis	protein	(ThiI)
zn-ribbon_14	PF16503.5	gi|289596819|ref|YP_003483515.1|	-	0.0054	16.2	0.3	0.0054	16.2	0.3	2.9	3	0	0	3	3	3	1	Zinc-ribbon
tRNA_Me_trans	PF03054.16	gi|289596819|ref|YP_003483515.1|	-	0.036	12.9	0.0	0.055	12.3	0.0	1.2	1	0	0	1	1	1	0	tRNA	methyl	transferase
QueC	PF06508.13	gi|289596819|ref|YP_003483515.1|	-	0.043	13.3	0.0	0.19	11.2	0.0	2.0	1	1	0	1	1	1	0	Queuosine	biosynthesis	protein	QueC
MazE_antitoxin	PF04014.18	gi|289596819|ref|YP_003483515.1|	-	0.1	12.5	0.0	0.25	11.3	0.0	1.7	1	0	0	1	1	1	0	Antidote-toxin	recognition	MazE,	bacterial	antitoxin
PAPS_reduct	PF01507.19	gi|289596819|ref|YP_003483515.1|	-	0.11	12.5	0.0	0.23	11.5	0.0	1.5	1	0	0	1	1	1	0	Phosphoadenosine	phosphosulfate	reductase	family
C5HCH	PF17982.1	gi|289596819|ref|YP_003483515.1|	-	0.81	9.9	4.4	8.4	6.6	0.2	2.4	2	0	0	2	2	2	0	NSD	Cys-His	rich	domain
C1_2	PF03107.16	gi|289596819|ref|YP_003483515.1|	-	1.3	9.4	5.5	0.73	10.2	0.4	2.8	3	0	0	3	3	3	0	C1	domain
DHH	PF01368.20	gi|289596820|ref|YP_003483516.1|	-	9.3e-06	25.8	0.2	1.5e-05	25.2	0.2	1.3	1	0	0	1	1	1	1	DHH	family
ThylakoidFormat	PF11264.8	gi|289596820|ref|YP_003483516.1|	-	0.0001	22.0	1.1	0.00015	21.5	1.1	1.1	1	0	0	1	1	1	1	Thylakoid	formation	protein
DHHA1	PF02272.19	gi|289596820|ref|YP_003483516.1|	-	0.00021	21.7	0.6	0.00084	19.8	0.5	2.2	1	1	0	1	1	1	1	DHHA1	domain
SpoVIF	PF14069.6	gi|289596820|ref|YP_003483516.1|	-	0.13	12.1	1.5	6.4	6.6	0.1	2.4	2	0	0	2	2	2	0	Stage	VI	sporulation	protein	F
PhoU_div	PF01865.16	gi|289596821|ref|YP_003483517.1|	-	1.9e-45	154.8	6.0	2.1e-45	154.7	6.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF47
PhoU	PF01895.19	gi|289596821|ref|YP_003483517.1|	-	0.00064	20.1	7.2	0.007	16.8	0.7	2.4	2	1	0	2	2	2	2	PhoU	domain
Arg_decarbox_C	PF17944.1	gi|289596821|ref|YP_003483517.1|	-	0.017	15.6	0.0	1.9	9.1	0.0	3.3	4	0	0	4	4	4	0	Arginine	decarboxylase	C-terminal	helical	extension
DUF2120	PF09893.9	gi|289596821|ref|YP_003483517.1|	-	0.49	10.5	5.1	0.17	12.0	0.4	2.1	1	1	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2120)
PHO4	PF01384.20	gi|289596822|ref|YP_003483518.1|	-	2.2e-117	391.9	33.5	2.7e-117	391.6	33.5	1.1	1	0	0	1	1	1	1	Phosphate	transporter	family
RseC_MucC	PF04246.12	gi|289596822|ref|YP_003483518.1|	-	0.0036	17.3	0.6	0.0036	17.3	0.6	3.9	3	2	5	8	8	8	1	Positive	regulator	of	sigma(E),	RseC/MucC
NUDIX	PF00293.28	gi|289596823|ref|YP_003483519.1|	-	8.4e-13	48.5	0.1	1.3e-12	47.9	0.0	1.3	1	1	0	1	1	1	1	NUDIX	domain
NMD3	PF04981.13	gi|289596824|ref|YP_003483520.1|	-	8.4e-49	166.2	3.4	1.2e-48	165.7	3.4	1.2	1	0	0	1	1	1	1	NMD3	family
NAD_binding_5	PF07994.12	gi|289596824|ref|YP_003483520.1|	-	0.01	15.2	0.0	0.015	14.7	0.0	1.2	1	0	0	1	1	1	0	Myo-inositol-1-phosphate	synthase
zf-RING_7	PF02591.15	gi|289596824|ref|YP_003483520.1|	-	0.018	15.2	5.5	0.09	13.0	0.4	3.3	3	0	0	3	3	3	0	C4-type	zinc	ribbon	domain
DNA_RNApol_7kD	PF03604.13	gi|289596824|ref|YP_003483520.1|	-	0.075	12.7	2.0	0.36	10.6	0.0	2.6	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
DZR	PF12773.7	gi|289596824|ref|YP_003483520.1|	-	0.094	12.8	4.4	0.36	10.9	2.2	2.4	2	0	0	2	2	2	0	Double	zinc	ribbon
FliO	PF04347.13	gi|289596824|ref|YP_003483520.1|	-	0.14	12.4	0.3	12	6.2	0.0	2.4	1	1	1	2	2	2	0	Flagellar	biosynthesis	protein,	FliO
zf-ribbon_3	PF13248.6	gi|289596824|ref|YP_003483520.1|	-	0.18	11.3	6.3	0.29	10.6	0.1	3.0	3	0	0	3	3	3	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.6	gi|289596824|ref|YP_003483520.1|	-	0.38	10.7	2.3	3.3	7.7	0.1	2.6	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-ISL3	PF14690.6	gi|289596824|ref|YP_003483520.1|	-	3.9	8.2	5.8	7.1	7.4	0.1	3.3	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
PAC2	PF09754.9	gi|289596825|ref|YP_003483521.1|	-	6.7e-46	157.0	0.0	8.1e-46	156.7	0.0	1.0	1	0	0	1	1	1	1	PAC2	family
Nop10p	PF04135.12	gi|289596826|ref|YP_003483522.1|	-	7e-24	83.6	1.8	8.1e-24	83.4	1.8	1.1	1	0	0	1	1	1	1	Nucleolar	RNA-binding	protein,	Nop10p	family
DUF35_N	PF12172.8	gi|289596826|ref|YP_003483522.1|	-	1.2e-05	25.1	0.9	2.1e-05	24.3	0.9	1.5	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
NOB1_Zn_bind	PF08772.11	gi|289596826|ref|YP_003483522.1|	-	0.00021	21.4	0.7	0.0037	17.4	0.7	2.1	1	1	0	1	1	1	1	Nin	one	binding	(NOB1)	Zn-ribbon	like
RecR	PF02132.15	gi|289596826|ref|YP_003483522.1|	-	0.00029	20.3	0.7	0.00034	20.1	0.7	1.2	1	0	0	1	1	1	1	RecR	protein
PolC_DP2	PF03833.13	gi|289596826|ref|YP_003483522.1|	-	0.00054	18.0	0.1	0.00054	18.0	0.1	1.0	1	0	0	1	1	1	1	DNA	polymerase	II	large	subunit	DP2
zf-ribbon_3	PF13248.6	gi|289596826|ref|YP_003483522.1|	-	0.0017	17.7	5.7	0.015	14.7	5.8	2.0	1	1	0	1	1	1	1	zinc-ribbon	domain
Zn-ribbon_8	PF09723.10	gi|289596826|ref|YP_003483522.1|	-	0.0041	17.2	3.2	0.39	10.9	0.1	2.2	1	1	1	2	2	2	2	Zinc	ribbon	domain
zf-NADH-PPase	PF09297.11	gi|289596826|ref|YP_003483522.1|	-	0.0047	16.6	4.3	1	9.1	0.6	2.2	1	1	0	2	2	2	2	NADH	pyrophosphatase	zinc	ribbon	domain
zinc_ribbon_2	PF13240.6	gi|289596826|ref|YP_003483522.1|	-	0.005	16.5	6.1	0.47	10.2	0.3	2.4	2	0	0	2	2	2	2	zinc-ribbon	domain
DZR	PF12773.7	gi|289596826|ref|YP_003483522.1|	-	0.0063	16.5	0.5	0.01	15.9	0.5	1.4	1	0	0	1	1	1	1	Double	zinc	ribbon
zf_C2H2_10	PF18414.1	gi|289596826|ref|YP_003483522.1|	-	0.011	15.3	3.5	0.66	9.6	0.3	2.3	2	0	0	2	2	2	0	C2H2	type	zinc-finger
NRDD	PF13597.6	gi|289596826|ref|YP_003483522.1|	-	0.011	14.6	0.3	0.012	14.4	0.3	1.1	1	0	0	1	1	1	0	Anaerobic	ribonucleoside-triphosphate	reductase
zf-C4_Topoisom	PF01396.19	gi|289596826|ref|YP_003483522.1|	-	0.022	14.6	5.5	1.1	9.1	0.3	2.6	3	0	0	3	3	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
HypA	PF01155.19	gi|289596826|ref|YP_003483522.1|	-	0.031	14.3	0.3	0.039	14.0	0.3	1.2	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
DNA_ligase_ZBD	PF03119.16	gi|289596826|ref|YP_003483522.1|	-	0.033	14.2	1.8	4.1	7.5	0.1	2.2	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-TFIIB	PF13453.6	gi|289596826|ref|YP_003483522.1|	-	0.037	13.4	3.9	2.9	7.3	0.4	2.2	1	1	2	3	3	3	0	Transcription	factor	zinc-finger
zf-tcix	PF14952.6	gi|289596826|ref|YP_003483522.1|	-	0.037	13.7	1.5	0.037	13.7	1.5	2.3	1	1	1	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
TackOD1	PF18551.1	gi|289596826|ref|YP_003483522.1|	-	0.043	13.5	0.5	0.055	13.1	0.5	1.2	1	0	0	1	1	1	0	Thaumarchaeal	output	domain	1
zf-ISL3	PF14690.6	gi|289596826|ref|YP_003483522.1|	-	0.048	14.3	4.9	2.2	9.0	0.3	2.2	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
DUF1936	PF09151.10	gi|289596826|ref|YP_003483522.1|	-	0.049	13.5	5.2	1.3	9.0	1.1	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1936)
Rubredoxin_2	PF18073.1	gi|289596826|ref|YP_003483522.1|	-	0.068	12.9	0.4	3.7	7.3	0.0	2.2	2	0	0	2	2	2	0	Rubredoxin	metal	binding	domain
TF_Zn_Ribbon	PF08271.12	gi|289596826|ref|YP_003483522.1|	-	0.083	12.4	4.4	3.1	7.4	0.3	2.2	1	1	1	2	2	2	0	TFIIB	zinc-binding
Ribosomal_L32p	PF01783.23	gi|289596826|ref|YP_003483522.1|	-	0.11	12.8	2.9	0.26	11.6	2.1	2.0	1	1	1	2	2	2	0	Ribosomal	L32p	protein	family
TFIIS_C	PF01096.18	gi|289596826|ref|YP_003483522.1|	-	0.12	12.2	1.4	10	6.0	0.2	2.1	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zf-IS66	PF13005.7	gi|289596826|ref|YP_003483522.1|	-	0.12	12.8	4.4	8.8	6.8	4.4	2.3	1	1	0	1	1	1	0	zinc-finger	binding	domain	of	transposase	IS66
zf-ACC	PF17848.1	gi|289596826|ref|YP_003483522.1|	-	0.14	12.2	7.4	1.3	9.2	0.1	3.0	3	0	0	3	3	3	0	Acetyl-coA	carboxylase	zinc	finger	domain
DUF1610	PF07754.11	gi|289596826|ref|YP_003483522.1|	-	0.14	12.1	8.9	1.1	9.3	1.9	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
zinc_ribbon_13	PF09855.9	gi|289596826|ref|YP_003483522.1|	-	0.2	11.8	0.9	11	6.3	0.0	2.2	2	0	0	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
DUF2321	PF10083.9	gi|289596826|ref|YP_003483522.1|	-	0.2	11.2	0.5	0.38	10.4	0.4	1.6	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2321)
Zn_Tnp_IS1595	PF12760.7	gi|289596826|ref|YP_003483522.1|	-	0.26	11.3	5.5	3.7	7.6	0.7	2.2	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
Nudix_N_2	PF14803.6	gi|289596826|ref|YP_003483522.1|	-	0.4	10.7	4.6	3.7	7.5	0.3	2.2	1	1	1	2	2	2	0	Nudix	N-terminal
zf-RRN7	PF11781.8	gi|289596826|ref|YP_003483522.1|	-	0.53	10.0	3.6	5.7	6.7	0.3	2.2	1	1	1	2	2	2	0	Zinc-finger	of	RNA-polymerase	I-specific	TFIIB,	Rrn7
zf_UBZ	PF18439.1	gi|289596826|ref|YP_003483522.1|	-	0.87	9.2	4.2	6.8	6.4	0.5	2.2	1	1	1	2	2	2	0	Ubiquitin-Binding	Zinc	Finger
VP_N-CPKC	PF11475.8	gi|289596826|ref|YP_003483522.1|	-	1.1	9.2	5.9	2.7	8.0	0.4	2.3	1	1	1	2	2	2	0	Virion	protein	N	terminal	domain
zf-CCHC_5	PF14787.6	gi|289596826|ref|YP_003483522.1|	-	1.3	8.8	8.1	3.6	7.4	1.1	2.2	2	0	0	2	2	2	0	GAG-polyprotein	viral	zinc-finger
Ogr_Delta	PF04606.12	gi|289596826|ref|YP_003483522.1|	-	1.3	9.1	4.7	9.8	6.2	0.4	2.3	2	0	0	2	2	2	0	Ogr/Delta-like	zinc	finger
EIF_2_alpha	PF07541.12	gi|289596827|ref|YP_003483523.1|	-	4.6e-23	81.5	0.0	1e-22	80.4	0.0	1.6	1	0	0	1	1	1	1	Eukaryotic	translation	initiation	factor	2	alpha	subunit
S1	PF00575.23	gi|289596827|ref|YP_003483523.1|	-	4e-14	52.7	0.1	6.8e-14	52.0	0.1	1.4	1	0	0	1	1	1	1	S1	RNA	binding	domain
HNOB	PF07700.15	gi|289596827|ref|YP_003483523.1|	-	0.029	14.3	0.0	0.059	13.3	0.0	1.6	1	0	0	1	1	1	0	Haem-NO-binding
Ribosomal_S27e	PF01667.17	gi|289596828|ref|YP_003483524.1|	-	4.7e-22	77.4	1.5	5.3e-22	77.3	1.5	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S27
A2L_zn_ribbon	PF08792.10	gi|289596828|ref|YP_003483524.1|	-	0.00063	19.4	0.9	0.00093	18.9	0.9	1.3	1	0	0	1	1	1	1	A2L	zinc	ribbon	domain
HypA	PF01155.19	gi|289596828|ref|YP_003483524.1|	-	0.0026	17.8	0.3	0.0029	17.6	0.3	1.1	1	0	0	1	1	1	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
zinc_ribbon_4	PF13717.6	gi|289596828|ref|YP_003483524.1|	-	0.0031	17.4	1.8	0.18	11.8	0.3	2.3	2	0	0	2	2	2	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.6	gi|289596828|ref|YP_003483524.1|	-	0.0045	16.4	1.4	0.27	10.7	0.2	2.2	2	0	0	2	2	2	1	zinc-ribbon	domain
zinc_ribbon_2	PF13240.6	gi|289596828|ref|YP_003483524.1|	-	0.0094	15.6	1.4	0.52	10.1	0.1	2.2	2	0	0	2	2	2	1	zinc-ribbon	domain
Zn_Tnp_IS91	PF14319.6	gi|289596828|ref|YP_003483524.1|	-	0.011	15.8	0.2	0.014	15.4	0.2	1.2	1	0	0	1	1	1	0	Transposase	zinc-binding	domain
zf-C4_Topoisom	PF01396.19	gi|289596828|ref|YP_003483524.1|	-	0.011	15.5	1.2	0.52	10.1	0.1	2.2	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
Elf1	PF05129.13	gi|289596828|ref|YP_003483524.1|	-	0.011	15.7	1.5	0.015	15.4	1.5	1.4	1	1	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
zinc_ribbon_6	PF14599.6	gi|289596828|ref|YP_003483524.1|	-	0.023	14.7	1.9	0.03	14.3	1.9	1.2	1	0	0	1	1	1	0	Zinc-ribbon
OrfB_Zn_ribbon	PF07282.11	gi|289596828|ref|YP_003483524.1|	-	0.023	14.6	0.1	0.029	14.3	0.1	1.4	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
Zn_ribbon_recom	PF13408.6	gi|289596828|ref|YP_003483524.1|	-	0.029	14.9	0.2	6.8	7.3	0.0	2.3	2	0	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
Lar_restr_allev	PF14354.6	gi|289596828|ref|YP_003483524.1|	-	0.029	14.7	0.9	0.047	14.1	0.9	1.4	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
TF_Zn_Ribbon	PF08271.12	gi|289596828|ref|YP_003483524.1|	-	0.03	13.9	1.6	0.47	10.0	2.0	2.0	1	1	1	2	2	2	0	TFIIB	zinc-binding
Zn-ribbon_8	PF09723.10	gi|289596828|ref|YP_003483524.1|	-	0.031	14.4	1.7	0.087	13.0	1.8	1.7	1	1	1	2	2	2	0	Zinc	ribbon	domain
Zn_Tnp_IS1595	PF12760.7	gi|289596828|ref|YP_003483524.1|	-	0.035	14.1	0.4	0.044	13.8	0.4	1.2	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
Ribosomal_L37ae	PF01780.19	gi|289596828|ref|YP_003483524.1|	-	0.038	14.1	0.6	0.042	13.9	0.6	1.1	1	0	0	1	1	1	0	Ribosomal	L37ae	protein	family
zf-AN1	PF01428.16	gi|289596828|ref|YP_003483524.1|	-	0.043	14.0	1.1	3	8.1	0.2	2.1	2	0	0	2	2	2	0	AN1-like	Zinc	finger
DUF3797	PF12677.7	gi|289596828|ref|YP_003483524.1|	-	0.044	13.7	1.3	0.076	12.9	1.2	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF3797)
TFIIS_C	PF01096.18	gi|289596828|ref|YP_003483524.1|	-	0.048	13.5	2.2	1.4	8.8	2.3	2.1	1	1	1	2	2	2	0	Transcription	factor	S-II	(TFIIS)
DNA_RNApol_7kD	PF03604.13	gi|289596828|ref|YP_003483524.1|	-	0.066	12.9	5.0	0.8	9.4	0.3	2.2	1	1	1	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Desulfoferrod_N	PF06397.12	gi|289596828|ref|YP_003483524.1|	-	0.077	12.6	2.6	0.33	10.6	0.0	2.6	3	0	0	3	3	3	0	Desulfoferrodoxin,	N-terminal	domain
DUF2614	PF11023.8	gi|289596828|ref|YP_003483524.1|	-	0.078	13.1	0.5	0.083	13.0	0.5	1.2	1	0	0	1	1	1	0	Zinc-ribbon	containing	domain
T4_baseplate	PF12322.8	gi|289596828|ref|YP_003483524.1|	-	0.095	12.2	0.4	0.095	12.2	0.4	1.4	1	1	0	1	1	1	0	T4	bacteriophage	base	plate	protein
DUF1451	PF07295.11	gi|289596828|ref|YP_003483524.1|	-	0.12	12.4	0.8	0.15	12.1	0.8	1.1	1	0	0	1	1	1	0	Zinc-ribbon	containing	domain
PADR1	PF08063.12	gi|289596828|ref|YP_003483524.1|	-	0.13	12.1	2.2	0.23	11.3	0.8	1.8	1	1	1	2	2	2	0	PADR1	(NUC008)	domain
eIF-5_eIF-2B	PF01873.17	gi|289596828|ref|YP_003483524.1|	-	0.14	12.1	1.3	0.17	11.8	1.3	1.2	1	0	0	1	1	1	0	Domain	found	in	IF2B/IF5
zf_UBZ	PF18439.1	gi|289596828|ref|YP_003483524.1|	-	0.14	11.8	0.8	6.8	6.4	0.1	2.1	2	0	0	2	2	2	0	Ubiquitin-Binding	Zinc	Finger
zf-ACC	PF17848.1	gi|289596828|ref|YP_003483524.1|	-	0.15	12.2	5.6	2.2	8.4	1.2	2.6	2	1	0	2	2	2	0	Acetyl-coA	carboxylase	zinc	finger	domain
CpXC	PF14353.6	gi|289596828|ref|YP_003483524.1|	-	0.17	12.0	1.4	1.1	9.3	0.1	2.0	1	1	1	2	2	2	0	CpXC	protein
zinc_ribbon_13	PF09855.9	gi|289596828|ref|YP_003483524.1|	-	0.19	11.9	2.6	0.88	9.8	0.1	2.1	1	1	1	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
ZZ	PF00569.17	gi|289596828|ref|YP_003483524.1|	-	0.22	11.4	2.2	5.2	7.0	0.1	2.1	1	1	1	2	2	2	0	Zinc	finger,	ZZ	type
zf-NADH-PPase	PF09297.11	gi|289596828|ref|YP_003483524.1|	-	0.22	11.2	1.9	0.81	9.4	0.4	2.0	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
zf-Mss51	PF13824.6	gi|289596828|ref|YP_003483524.1|	-	0.29	11.3	2.5	2	8.6	0.3	2.0	1	1	1	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
zf-CCHC_6	PF15288.6	gi|289596828|ref|YP_003483524.1|	-	0.41	10.5	5.5	6.5	6.7	0.7	2.2	2	0	0	2	2	2	0	Zinc	knuckle
Zn_Tnp_IS1	PF03811.13	gi|289596828|ref|YP_003483524.1|	-	0.43	10.4	3.3	1.9	8.3	0.2	2.1	1	1	1	2	2	2	0	InsA	N-terminal	domain
zf-DNL	PF05180.12	gi|289596828|ref|YP_003483524.1|	-	0.76	9.8	5.2	5.3	7.0	0.6	2.1	1	1	1	2	2	2	0	DNL	zinc	finger
Mu-like_Com	PF10122.9	gi|289596828|ref|YP_003483524.1|	-	1.3	8.5	4.6	2.3	7.7	0.5	2.1	1	1	1	2	2	2	0	Mu-like	prophage	protein	Com
Ribosomal_L44	PF00935.19	gi|289596829|ref|YP_003483525.1|	-	9.3e-30	102.9	4.8	9.3e-30	102.9	4.8	1.3	2	0	0	2	2	2	1	Ribosomal	protein	L44
Ribosomal_L33	PF00471.20	gi|289596829|ref|YP_003483525.1|	-	0.0016	18.8	3.1	0.0016	18.8	3.1	2.7	2	1	1	3	3	3	1	Ribosomal	protein	L33
Elf1	PF05129.13	gi|289596829|ref|YP_003483525.1|	-	0.012	15.7	2.4	1.3	9.1	0.1	2.2	2	0	0	2	2	2	0	Transcription	elongation	factor	Elf1	like
zf-LITAF-like	PF10601.9	gi|289596829|ref|YP_003483525.1|	-	0.013	15.8	1.1	0.086	13.1	0.1	2.0	2	0	0	2	2	2	0	LITAF-like	zinc	ribbon	domain
HNH	PF01844.23	gi|289596829|ref|YP_003483525.1|	-	0.045	13.9	1.3	1.1	9.5	0.1	2.3	2	0	0	2	2	2	0	HNH	endonuclease
zinc_ribbon_10	PF10058.9	gi|289596829|ref|YP_003483525.1|	-	0.11	12.2	1.1	7.3	6.4	0.1	2.2	2	0	0	2	2	2	0	Predicted	integral	membrane	zinc-ribbon	metal-binding	protein
Cys_rich_KTR	PF14205.6	gi|289596829|ref|YP_003483525.1|	-	0.16	11.7	4.6	0.23	11.3	1.1	2.1	2	0	0	2	2	2	0	Cysteine-rich	KTR
Radical_SAM	PF04055.21	gi|289596830|ref|YP_003483526.1|	-	4.9e-13	49.8	0.2	1.6e-12	48.1	0.1	1.8	1	1	0	2	2	2	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|289596830|ref|YP_003483526.1|	-	0.0059	16.7	0.0	0.012	15.8	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Hydrolase	PF00702.26	gi|289596830|ref|YP_003483526.1|	-	0.11	12.8	0.0	0.19	12.0	0.0	1.5	1	0	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
AIRS_C	PF02769.22	gi|289596831|ref|YP_003483527.1|	-	6.6e-21	75.1	0.0	1.1e-20	74.3	0.0	1.3	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.24	gi|289596831|ref|YP_003483527.1|	-	6.7e-16	58.7	0.1	1e-15	58.1	0.1	1.3	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
DUF2150	PF09920.9	gi|289596831|ref|YP_003483527.1|	-	0.19	11.7	1.3	0.21	11.6	0.1	1.6	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2150)
HTH_24	PF13412.6	gi|289596832|ref|YP_003483528.1|	-	0.0016	18.0	0.4	0.011	15.3	0.1	2.5	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HxlR	PF01638.17	gi|289596832|ref|YP_003483528.1|	-	0.043	13.7	0.0	0.79	9.6	0.0	2.3	2	0	0	2	2	2	0	HxlR-like	helix-turn-helix
HTH_47	PF16221.5	gi|289596832|ref|YP_003483528.1|	-	0.053	13.1	0.2	0.13	11.9	0.0	1.7	2	0	0	2	2	2	0	winged	helix-turn-helix
MarR	PF01047.22	gi|289596832|ref|YP_003483528.1|	-	0.15	12.0	0.1	0.49	10.4	0.1	1.9	1	0	0	1	1	1	0	MarR	family
E1-E2_ATPase	PF00122.20	gi|289596833|ref|YP_003483529.1|	-	3.5e-53	179.8	1.9	3.5e-53	179.8	1.9	3.2	3	1	0	3	3	3	1	E1-E2	ATPase
Hydrolase	PF00702.26	gi|289596833|ref|YP_003483529.1|	-	5.2e-30	105.3	1.9	8.6e-30	104.6	1.9	1.4	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Cation_ATPase_N	PF00690.26	gi|289596833|ref|YP_003483529.1|	-	2.2e-16	59.3	0.1	1.6e-15	56.5	0.0	2.5	2	0	0	2	2	2	1	Cation	transporter/ATPase,	N-terminus
Hydrolase_3	PF08282.12	gi|289596833|ref|YP_003483529.1|	-	6.1e-06	26.2	2.1	0.0013	18.5	0.2	3.0	3	0	0	3	3	3	2	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.7	gi|289596833|ref|YP_003483529.1|	-	0.0013	19.2	0.0	0.0051	17.2	0.0	2.0	2	0	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
Cation_ATPase	PF13246.6	gi|289596833|ref|YP_003483529.1|	-	0.0022	18.0	0.0	0.0054	16.8	0.0	1.6	1	0	0	1	1	1	1	Cation	transport	ATPase	(P-type)
FliMN_C	PF01052.20	gi|289596833|ref|YP_003483529.1|	-	0.076	13.0	0.5	2.6	8.1	0.0	2.5	2	0	0	2	2	2	0	Type	III	flagellar	switch	regulator	(C-ring)	FliN	C-term
ABC2_membrane_5	PF13346.6	gi|289596834|ref|YP_003483530.1|	-	0.51	9.9	25.6	0.12	12.0	8.6	2.1	2	0	0	2	2	2	0	ABC-2	family	transporter	protein
DUF2070	PF09843.9	gi|289596834|ref|YP_003483530.1|	-	1.2	7.3	18.6	0.55	8.5	16.3	1.5	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
DUF2157	PF09925.9	gi|289596834|ref|YP_003483530.1|	-	4.2	7.2	13.1	0.77	9.5	2.4	2.3	1	1	1	2	2	2	0	Predicted	membrane	protein	(DUF2157)
Ribonuc_red_lgC	PF02867.15	gi|289596835|ref|YP_003483531.1|	-	2.8e-170	567.3	0.0	1.1e-168	562.1	0.0	2.3	1	1	0	1	1	1	1	Ribonucleotide	reductase,	barrel	domain
Ribonuc_red_lgN	PF00317.21	gi|289596835|ref|YP_003483531.1|	-	4.6e-26	90.7	0.1	1.1e-25	89.5	0.1	1.7	1	0	0	1	1	1	1	Ribonucleotide	reductase,	all-alpha	domain
ATP-cone	PF03477.16	gi|289596835|ref|YP_003483531.1|	-	8e-25	87.2	4.9	3.2e-24	85.3	4.9	2.2	1	0	0	1	1	1	1	ATP	cone	domain
F-112	PF09645.10	gi|289596835|ref|YP_003483531.1|	-	0.04	14.0	3.2	0.15	12.2	0.2	2.8	3	0	0	3	3	3	0	F-112	protein
NTP_transferase	PF00483.23	gi|289596836|ref|YP_003483532.1|	-	1.2e-38	133.1	0.0	1.4e-38	132.9	0.0	1.0	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.7	gi|289596836|ref|YP_003483532.1|	-	6.3e-13	49.4	0.0	7.3e-13	49.2	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
PS_pyruv_trans	PF04230.13	gi|289596836|ref|YP_003483532.1|	-	0.018	15.0	1.0	0.026	14.5	1.0	1.3	1	0	0	1	1	1	0	Polysaccharide	pyruvyl	transferase
CTP_transf_3	PF02348.19	gi|289596836|ref|YP_003483532.1|	-	0.024	14.5	0.0	0.036	14.0	0.0	1.3	1	0	0	1	1	1	0	Cytidylyltransferase
Lyase_1	PF00206.20	gi|289596837|ref|YP_003483533.1|	-	2.7e-55	188.0	0.1	3.8e-55	187.5	0.1	1.2	1	0	0	1	1	1	1	Lyase
ADSL_C	PF10397.9	gi|289596837|ref|YP_003483533.1|	-	2.4e-15	56.8	0.0	1.4e-14	54.3	0.0	2.4	3	1	0	3	3	3	1	Adenylosuccinate	lyase	C-terminus
ASL_C	PF08328.11	gi|289596837|ref|YP_003483533.1|	-	7.7e-09	35.7	0.8	2.1e-08	34.3	0.1	2.2	2	0	0	2	2	2	1	Adenylosuccinate	lyase	C-terminal
Scaffolding_pro	PF11418.8	gi|289596837|ref|YP_003483533.1|	-	0.011	16.2	0.2	0.18	12.3	0.0	2.5	2	0	0	2	2	2	0	Phi29	scaffolding	protein
ANTAR	PF03861.14	gi|289596837|ref|YP_003483533.1|	-	0.032	14.1	0.1	0.1	12.4	0.0	1.9	2	0	0	2	2	2	0	ANTAR	domain
DUF3348	PF11828.8	gi|289596838|ref|YP_003483534.1|	-	0.16	11.7	4.1	0.19	11.4	4.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3348)
Activator-TraM	PF11657.8	gi|289596838|ref|YP_003483534.1|	-	0.29	11.0	3.7	3.2	7.6	0.1	2.3	1	1	1	2	2	2	0	Transcriptional	activator	TraM
UPF0242	PF06785.11	gi|289596838|ref|YP_003483534.1|	-	0.59	10.2	14.3	0.7	10.0	14.3	1.1	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0242)	N-terminus
Prominin	PF05478.11	gi|289596838|ref|YP_003483534.1|	-	0.98	7.3	5.1	1.1	7.1	5.1	1.1	1	0	0	1	1	1	0	Prominin
TMF_DNA_bd	PF12329.8	gi|289596838|ref|YP_003483534.1|	-	1.3	9.0	21.6	0.62	10.1	6.2	3.0	1	1	2	3	3	3	0	TATA	element	modulatory	factor	1	DNA	binding
DUF4407	PF14362.6	gi|289596838|ref|YP_003483534.1|	-	1.7	7.9	9.5	2.4	7.4	9.5	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
FapA	PF03961.13	gi|289596838|ref|YP_003483534.1|	-	2	6.9	15.2	2.2	6.8	15.2	1.1	1	0	0	1	1	1	0	Flagellar	Assembly	Protein	A
LMBR1	PF04791.16	gi|289596838|ref|YP_003483534.1|	-	2.6	6.9	4.6	3	6.7	4.6	1.1	1	0	0	1	1	1	0	LMBR1-like	membrane	protein
AAA_11	PF13086.6	gi|289596838|ref|YP_003483534.1|	-	3.2	7.5	10.9	4	7.1	10.9	1.1	1	0	0	1	1	1	0	AAA	domain
XhlA	PF10779.9	gi|289596838|ref|YP_003483534.1|	-	3.6	7.9	9.4	1.8	8.8	1.8	2.4	2	0	0	2	2	2	0	Haemolysin	XhlA
DUF3698	PF12479.8	gi|289596838|ref|YP_003483534.1|	-	6	7.5	10.3	1.7	9.2	6.4	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3698)
CTNNBL	PF08216.11	gi|289596838|ref|YP_003483534.1|	-	6.5	7.0	12.9	14	5.9	12.7	1.8	1	1	0	1	1	1	0	Catenin-beta-like,	Arm-motif	containing	nuclear
DUF4094	PF13334.6	gi|289596838|ref|YP_003483534.1|	-	7.5	7.0	6.4	17	5.9	6.4	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4094)
TMPIT	PF07851.13	gi|289596838|ref|YP_003483534.1|	-	7.7	5.7	11.8	11	5.2	11.8	1.3	1	0	0	1	1	1	0	TMPIT-like	protein
BST2	PF16716.5	gi|289596838|ref|YP_003483534.1|	-	8.3	7.1	10.4	2.2	8.9	5.9	2.0	1	1	1	2	2	2	0	Bone	marrow	stromal	antigen	2
HAUS6_N	PF14661.6	gi|289596838|ref|YP_003483534.1|	-	9.4	5.7	18.4	41	3.7	18.4	1.8	1	1	0	1	1	1	0	HAUS	augmin-like	complex	subunit	6	N-terminus
Neur_chan_memb	PF02932.16	gi|289596838|ref|YP_003483534.1|	-	9.5	6.2	6.6	11	5.9	6.6	1.1	1	0	0	1	1	1	0	Neurotransmitter-gated	ion-channel	transmembrane	region
DDE_Tnp_1	PF01609.21	gi|289596839|ref|YP_003483535.1|	-	2e-22	79.9	1.4	2.5e-22	79.6	0.3	1.7	2	0	0	2	2	2	1	Transposase	DDE	domain
DDE_Tnp_1_6	PF13751.6	gi|289596839|ref|YP_003483535.1|	-	0.0029	17.8	0.1	0.0078	16.4	0.0	1.8	2	0	0	2	2	2	1	Transposase	DDE	domain
DUF772	PF05598.11	gi|289596839|ref|YP_003483535.1|	-	0.0067	16.4	0.5	0.015	15.3	0.5	1.5	1	0	0	1	1	1	1	Transposase	domain	(DUF772)
Phage_GPA	PF05840.13	gi|289596839|ref|YP_003483535.1|	-	0.074	12.1	0.2	0.12	11.5	0.2	1.3	1	0	0	1	1	1	0	Bacteriophage	replication	gene	A	protein	(GPA)
TMF_DNA_bd	PF12329.8	gi|289596840|ref|YP_003483536.1|	-	2.6e-05	24.1	4.4	4.5e-05	23.4	4.4	1.4	1	0	0	1	1	1	1	TATA	element	modulatory	factor	1	DNA	binding
KASH_CCD	PF14662.6	gi|289596840|ref|YP_003483536.1|	-	0.00059	19.7	2.1	0.00066	19.6	2.1	1.0	1	0	0	1	1	1	1	Coiled-coil	region	of	CCDC155	or	KASH
ABC_tran_CTD	PF16326.5	gi|289596840|ref|YP_003483536.1|	-	0.00078	19.6	3.0	0.0017	18.6	3.0	1.6	1	1	0	1	1	1	1	ABC	transporter	C-terminal	domain
DUF5082	PF16888.5	gi|289596840|ref|YP_003483536.1|	-	0.0012	19.1	3.6	0.0014	18.9	3.6	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF5082)
Prefoldin_2	PF01920.20	gi|289596840|ref|YP_003483536.1|	-	0.0026	17.7	3.6	0.053	13.5	0.9	2.0	1	1	1	2	2	2	1	Prefoldin	subunit
ADIP	PF11559.8	gi|289596840|ref|YP_003483536.1|	-	0.0034	17.5	3.6	0.004	17.3	3.6	1.1	1	0	0	1	1	1	1	Afadin-	and	alpha	-actinin-Binding
STAT_alpha	PF01017.20	gi|289596840|ref|YP_003483536.1|	-	0.0039	17.1	0.9	0.0043	17.0	0.9	1.0	1	0	0	1	1	1	1	STAT	protein,	all-alpha	domain
PspA_IM30	PF04012.12	gi|289596840|ref|YP_003483536.1|	-	0.0052	16.4	2.6	0.0057	16.3	2.6	1.2	1	0	0	1	1	1	1	PspA/IM30	family
Jnk-SapK_ap_N	PF09744.9	gi|289596840|ref|YP_003483536.1|	-	0.0067	16.7	2.6	0.0084	16.3	2.6	1.1	1	0	0	1	1	1	1	JNK_SAPK-associated	protein-1
MscS_porin	PF12795.7	gi|289596840|ref|YP_003483536.1|	-	0.0067	16.0	5.2	0.0086	15.6	3.3	1.8	1	1	1	2	2	2	1	Mechanosensitive	ion	channel	porin	domain
DUF632	PF04782.12	gi|289596840|ref|YP_003483536.1|	-	0.0093	15.3	0.7	0.01	15.2	0.7	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF632)
MSP1_C	PF07462.11	gi|289596840|ref|YP_003483536.1|	-	0.0099	14.6	4.4	0.011	14.5	4.4	1.0	1	0	0	1	1	1	1	Merozoite	surface	protein	1	(MSP1)	C-terminus
ZapB	PF06005.12	gi|289596840|ref|YP_003483536.1|	-	0.01	16.3	1.7	0.013	15.9	1.7	1.4	1	0	0	1	1	1	0	Cell	division	protein	ZapB
GrpE	PF01025.19	gi|289596840|ref|YP_003483536.1|	-	0.01	15.5	6.3	0.012	15.3	6.3	1.1	1	0	0	1	1	1	0	GrpE
HCMV_UL139	PF12507.8	gi|289596840|ref|YP_003483536.1|	-	0.011	16.1	1.4	0.012	16.0	1.4	1.1	1	0	0	1	1	1	0	Human	Cytomegalovirus	UL139	protein
LPP	PF04728.13	gi|289596840|ref|YP_003483536.1|	-	0.013	15.9	0.8	0.02	15.3	0.8	1.4	1	0	0	1	1	1	0	Lipoprotein	leucine-zipper
DivIC	PF04977.15	gi|289596840|ref|YP_003483536.1|	-	0.015	15.0	4.9	0.028	14.2	4.9	1.5	1	1	0	1	1	1	0	Septum	formation	initiator
COG2	PF06148.11	gi|289596840|ref|YP_003483536.1|	-	0.016	15.3	1.2	0.017	15.2	1.2	1.0	1	0	0	1	1	1	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
APG6_N	PF17675.1	gi|289596840|ref|YP_003483536.1|	-	0.017	15.6	4.5	0.026	15.1	4.5	1.3	1	1	0	1	1	1	0	Apg6	coiled-coil	region
CM_2	PF01817.21	gi|289596840|ref|YP_003483536.1|	-	0.019	15.3	0.4	0.03	14.6	0.3	1.4	1	1	0	1	1	1	0	Chorismate	mutase	type	II
SPAM	PF02090.15	gi|289596840|ref|YP_003483536.1|	-	0.022	14.6	4.5	0.038	13.8	4.5	1.4	1	1	0	1	1	1	0	Salmonella	surface	presentation	of	antigen	gene	type	M	protein
Seryl_tRNA_N	PF02403.22	gi|289596840|ref|YP_003483536.1|	-	0.023	14.9	5.1	0.027	14.7	5.1	1.1	1	0	0	1	1	1	0	Seryl-tRNA	synthetase	N-terminal	domain
SlyX	PF04102.12	gi|289596840|ref|YP_003483536.1|	-	0.023	15.3	0.1	0.03	14.9	0.1	1.2	1	0	0	1	1	1	0	SlyX
DUF4200	PF13863.6	gi|289596840|ref|YP_003483536.1|	-	0.023	15.1	3.5	0.023	15.1	3.5	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4200)
Atg14	PF10186.9	gi|289596840|ref|YP_003483536.1|	-	0.024	13.7	5.8	0.027	13.6	5.8	1.0	1	0	0	1	1	1	0	Vacuolar	sorting	38	and	autophagy-related	subunit	14
Synaptobrevin	PF00957.21	gi|289596840|ref|YP_003483536.1|	-	0.024	14.4	0.3	0.034	13.9	0.3	1.2	1	0	0	1	1	1	0	Synaptobrevin
GAS	PF13851.6	gi|289596840|ref|YP_003483536.1|	-	0.025	13.9	5.9	0.029	13.7	5.9	1.0	1	0	0	1	1	1	0	Growth-arrest	specific	micro-tubule	binding
Snf7	PF03357.21	gi|289596840|ref|YP_003483536.1|	-	0.027	14.1	5.5	0.028	14.0	5.5	1.1	1	0	0	1	1	1	0	Snf7
TMCO5	PF14992.6	gi|289596840|ref|YP_003483536.1|	-	0.028	14.0	1.7	0.036	13.7	1.7	1.2	1	0	0	1	1	1	0	TMCO5	family
DUF4527	PF15030.6	gi|289596840|ref|YP_003483536.1|	-	0.029	13.8	0.5	0.036	13.5	0.5	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4527)
FapA	PF03961.13	gi|289596840|ref|YP_003483536.1|	-	0.04	12.5	4.4	0.039	12.6	4.4	1.0	1	0	0	1	1	1	0	Flagellar	Assembly	Protein	A
Fib_alpha	PF08702.10	gi|289596840|ref|YP_003483536.1|	-	0.041	14.1	1.9	0.052	13.7	1.5	1.3	1	1	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
TSC22	PF01166.18	gi|289596840|ref|YP_003483536.1|	-	0.041	14.2	0.3	0.11	12.8	0.1	1.8	1	1	2	3	3	3	0	TSC-22/dip/bun	family
DUF4988	PF16378.5	gi|289596840|ref|YP_003483536.1|	-	0.048	13.3	0.1	0.048	13.3	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function
bZIP_2	PF07716.15	gi|289596840|ref|YP_003483536.1|	-	0.048	13.8	2.2	0.048	13.8	2.2	2.1	2	0	0	2	2	2	0	Basic	region	leucine	zipper
OmpH	PF03938.14	gi|289596840|ref|YP_003483536.1|	-	0.05	13.9	5.4	0.06	13.7	5.4	1.1	1	0	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
Nup54	PF13874.6	gi|289596840|ref|YP_003483536.1|	-	0.053	13.6	0.8	0.055	13.6	0.8	1.1	1	0	0	1	1	1	0	Nucleoporin	complex	subunit	54
CENP-H	PF05837.12	gi|289596840|ref|YP_003483536.1|	-	0.054	13.9	3.5	0.059	13.8	3.5	1.1	1	0	0	1	1	1	0	Centromere	protein	H	(CENP-H)
TPD52	PF04201.15	gi|289596840|ref|YP_003483536.1|	-	0.054	13.1	2.9	0.068	12.8	2.9	1.1	1	0	0	1	1	1	0	Tumour	protein	D52	family
DUF3287	PF11690.8	gi|289596840|ref|YP_003483536.1|	-	0.065	13.0	0.4	0.097	12.4	0.3	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3287)
HAUS-augmin3	PF14932.6	gi|289596840|ref|YP_003483536.1|	-	0.083	12.5	3.2	0.098	12.2	3.2	1.0	1	0	0	1	1	1	0	HAUS	augmin-like	complex	subunit	3
DUF724	PF05266.14	gi|289596840|ref|YP_003483536.1|	-	0.087	12.6	4.8	0.1	12.4	4.8	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF724)
DUF4407	PF14362.6	gi|289596840|ref|YP_003483536.1|	-	0.089	12.1	1.6	0.11	11.9	1.6	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
DUF4337	PF14235.6	gi|289596840|ref|YP_003483536.1|	-	0.13	12.3	5.4	0.17	12.0	5.4	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4337)
Swi5	PF07061.11	gi|289596840|ref|YP_003483536.1|	-	0.14	12.2	2.3	0.29	11.2	2.3	1.7	1	1	0	1	1	1	0	Swi5
TPR_MLP1_2	PF07926.12	gi|289596840|ref|YP_003483536.1|	-	0.16	12.0	7.3	0.7	10.0	7.2	1.9	1	1	0	1	1	1	0	TPR/MLP1/MLP2-like	protein
Ax_dynein_light	PF10211.9	gi|289596840|ref|YP_003483536.1|	-	0.29	11.1	5.4	0.33	10.9	5.4	1.1	1	0	0	1	1	1	0	Axonemal	dynein	light	chain
SAM_adeno_trans	PF01887.16	gi|289596843|ref|YP_003483539.1|	-	1.6e-84	283.0	0.5	1.8e-84	282.8	0.5	1.0	1	0	0	1	1	1	1	S-adenosyl-l-methionine	hydroxide	adenosyltransferase
Acylphosphatase	PF00708.18	gi|289596844|ref|YP_003483540.1|	-	9.2e-26	90.1	0.0	1e-25	89.9	0.0	1.0	1	0	0	1	1	1	1	Acylphosphatase
Pribosyltran	PF00156.27	gi|289596845|ref|YP_003483541.1|	-	4.3e-13	49.1	1.3	5.6e-13	48.7	1.3	1.1	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.6	gi|289596845|ref|YP_003483541.1|	-	0.00086	18.8	0.0	0.001	18.5	0.0	1.2	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
ATP_bind_1	PF03029.17	gi|289596846|ref|YP_003483542.1|	-	4.3e-56	190.4	0.0	5.2e-56	190.1	0.0	1.0	1	0	0	1	1	1	1	Conserved	hypothetical	ATP	binding	protein
AAA_24	PF13479.6	gi|289596846|ref|YP_003483542.1|	-	1.7e-05	24.6	0.0	2.5e-05	24.1	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
CLP1_P	PF16575.5	gi|289596846|ref|YP_003483542.1|	-	0.0001	22.2	0.0	0.0009	19.1	0.0	2.2	2	0	0	2	2	2	1	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
SRP54	PF00448.22	gi|289596846|ref|YP_003483542.1|	-	0.00036	20.2	0.0	0.18	11.4	0.0	2.2	2	0	0	2	2	2	2	SRP54-type	protein,	GTPase	domain
ArsA_ATPase	PF02374.15	gi|289596846|ref|YP_003483542.1|	-	0.0012	18.1	0.0	0.0067	15.7	0.0	1.9	2	0	0	2	2	2	1	Anion-transporting	ATPase
CbiA	PF01656.23	gi|289596846|ref|YP_003483542.1|	-	0.0041	17.2	0.0	0.0079	16.2	0.0	1.3	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_30	PF13604.6	gi|289596846|ref|YP_003483542.1|	-	0.0065	16.2	0.0	0.013	15.2	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|289596846|ref|YP_003483542.1|	-	0.01	16.1	0.0	0.019	15.3	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_16	PF13191.6	gi|289596846|ref|YP_003483542.1|	-	0.026	14.9	0.0	0.04	14.3	0.0	1.5	1	1	0	1	1	1	0	AAA	ATPase	domain
Ras	PF00071.22	gi|289596846|ref|YP_003483542.1|	-	0.027	14.1	0.1	8.2	6.0	0.0	2.5	3	0	0	3	3	3	0	Ras	family
Roc	PF08477.13	gi|289596846|ref|YP_003483542.1|	-	0.036	14.3	0.0	10	6.4	0.0	2.3	2	0	0	2	2	2	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
AAA_29	PF13555.6	gi|289596846|ref|YP_003483542.1|	-	0.04	13.7	0.0	0.096	12.4	0.0	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
IstB_IS21	PF01695.17	gi|289596846|ref|YP_003483542.1|	-	0.066	12.9	0.0	0.12	12.1	0.0	1.3	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
NB-ARC	PF00931.22	gi|289596846|ref|YP_003483542.1|	-	0.075	12.2	0.0	0.11	11.7	0.0	1.3	1	0	0	1	1	1	0	NB-ARC	domain
AAA_5	PF07728.14	gi|289596846|ref|YP_003483542.1|	-	0.091	12.8	0.0	0.15	12.1	0.0	1.3	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_33	PF13671.6	gi|289596846|ref|YP_003483542.1|	-	0.11	12.7	0.0	0.16	12.1	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_7	PF12775.7	gi|289596846|ref|YP_003483542.1|	-	0.13	11.7	0.0	0.24	10.9	0.0	1.3	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
ATPase	PF06745.13	gi|289596846|ref|YP_003483542.1|	-	0.15	11.4	0.0	0.37	10.1	0.0	1.6	2	1	0	2	2	2	0	KaiC
T2SSE	PF00437.20	gi|289596846|ref|YP_003483542.1|	-	0.16	11.0	0.0	0.24	10.4	0.0	1.2	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
MeaB	PF03308.16	gi|289596846|ref|YP_003483542.1|	-	0.17	10.9	0.0	0.26	10.2	0.0	1.2	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
AAA_18	PF13238.6	gi|289596846|ref|YP_003483542.1|	-	0.19	12.3	0.0	0.36	11.4	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
PolC_DP2	PF03833.13	gi|289596847|ref|YP_003483543.1|	-	0	1201.2	0.9	0	1197.7	0.2	2.5	2	1	0	2	2	2	1	DNA	polymerase	II	large	subunit	DP2
DZR	PF12773.7	gi|289596847|ref|YP_003483543.1|	-	0.0002	21.3	8.7	0.056	13.5	0.3	2.6	3	0	0	3	3	2	2	Double	zinc	ribbon
zinc-ribbons_6	PF07191.12	gi|289596847|ref|YP_003483543.1|	-	0.00027	20.9	0.8	0.84	9.7	0.0	2.4	2	0	0	2	2	2	2	zinc-ribbons
HypA	PF01155.19	gi|289596847|ref|YP_003483543.1|	-	0.00073	19.5	0.7	0.22	11.5	0.0	2.7	2	0	0	2	2	2	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
Nop10p	PF04135.12	gi|289596847|ref|YP_003483543.1|	-	0.00094	19.2	1.6	0.064	13.3	0.1	2.8	2	0	0	2	2	2	1	Nucleolar	RNA-binding	protein,	Nop10p	family
DUF2072	PF09845.9	gi|289596847|ref|YP_003483543.1|	-	0.0011	19.2	0.6	0.045	14.0	0.1	2.6	2	0	0	2	2	2	1	Zn-ribbon	containing	protein
DUF2321	PF10083.9	gi|289596847|ref|YP_003483543.1|	-	0.0014	18.3	0.8	2.1	7.9	0.1	2.8	2	0	0	2	2	2	2	Uncharacterized	protein	conserved	in	bacteria	(DUF2321)
DUF1272	PF06906.11	gi|289596847|ref|YP_003483543.1|	-	0.0086	16.1	5.2	0.25	11.4	0.7	2.6	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1272)
NOB1_Zn_bind	PF08772.11	gi|289596847|ref|YP_003483543.1|	-	0.014	15.5	6.4	3.5	7.8	0.3	3.3	2	1	0	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
zf-NADH-PPase	PF09297.11	gi|289596847|ref|YP_003483543.1|	-	0.021	14.5	12.0	0.079	12.6	1.0	4.1	4	0	0	4	4	4	0	NADH	pyrophosphatase	zinc	ribbon	domain
zinc_ribbon_15	PF17032.5	gi|289596847|ref|YP_003483543.1|	-	0.13	13.0	0.9	14	6.6	0.1	2.6	2	0	0	2	2	2	0	zinc-ribbon	family
Zn_Tnp_IS91	PF14319.6	gi|289596847|ref|YP_003483543.1|	-	0.15	12.1	3.1	4.6	7.3	0.1	2.8	2	1	1	3	3	3	0	Transposase	zinc-binding	domain
NRDD	PF13597.6	gi|289596847|ref|YP_003483543.1|	-	1	8.1	4.4	1.4	7.6	0.2	2.2	2	0	0	2	2	2	0	Anaerobic	ribonucleoside-triphosphate	reductase
Nudix_N_2	PF14803.6	gi|289596847|ref|YP_003483543.1|	-	1.1	9.2	11.2	6	6.9	0.4	4.3	4	0	0	4	4	4	0	Nudix	N-terminal
NAD_synthase	PF02540.17	gi|289596848|ref|YP_003483544.1|	-	6.4e-84	280.8	0.1	7.4e-84	280.6	0.1	1.0	1	0	0	1	1	1	1	NAD	synthase
tRNA_Me_trans	PF03054.16	gi|289596848|ref|YP_003483544.1|	-	6.7e-07	28.4	0.0	9.2e-05	21.4	0.0	2.3	2	0	0	2	2	2	2	tRNA	methyl	transferase
Asn_synthase	PF00733.21	gi|289596848|ref|YP_003483544.1|	-	3.6e-05	23.6	0.0	5.2e-05	23.1	0.0	1.2	1	0	0	1	1	1	1	Asparagine	synthase
QueC	PF06508.13	gi|289596848|ref|YP_003483544.1|	-	9.3e-05	22.0	0.0	0.00057	19.4	0.0	2.0	2	0	0	2	2	2	1	Queuosine	biosynthesis	protein	QueC
ThiI	PF02568.14	gi|289596848|ref|YP_003483544.1|	-	0.026	14.1	0.0	0.044	13.4	0.0	1.2	1	0	0	1	1	1	0	Thiamine	biosynthesis	protein	(ThiI)
ATP_bind_3	PF01171.20	gi|289596848|ref|YP_003483544.1|	-	0.091	12.5	0.0	0.17	11.6	0.0	1.5	1	0	0	1	1	1	0	PP-loop	family
DUF424	PF04242.13	gi|289596849|ref|YP_003483545.1|	-	5.4e-31	106.7	0.3	6.1e-31	106.5	0.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF424)
MCM	PF00493.23	gi|289596850|ref|YP_003483546.1|	-	4.3e-91	304.0	0.0	7.2e-91	303.3	0.0	1.4	1	0	0	1	1	1	1	MCM	P-loop	domain
MCM_lid	PF17855.1	gi|289596850|ref|YP_003483546.1|	-	6.7e-28	97.0	2.8	6.7e-28	97.0	2.8	1.9	2	0	0	2	2	2	1	MCM	AAA-lid	domain
MCM_OB	PF17207.3	gi|289596850|ref|YP_003483546.1|	-	5.3e-27	94.2	0.1	8.9e-27	93.4	0.1	1.4	1	0	0	1	1	1	1	MCM	OB	domain
Mg_chelatase	PF01078.21	gi|289596850|ref|YP_003483546.1|	-	5.1e-07	29.3	0.1	0.0013	18.1	0.0	2.8	1	1	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AbiEi_4	PF13338.6	gi|289596850|ref|YP_003483546.1|	-	5.6e-06	26.4	0.0	6.1e-05	23.1	0.0	2.7	2	0	0	2	2	2	1	Transcriptional	regulator,	AbiEi	antitoxin
MCM_N	PF14551.6	gi|289596850|ref|YP_003483546.1|	-	0.00011	22.8	1.3	0.00026	21.5	0.3	2.1	2	0	0	2	2	2	1	MCM	N-terminal	domain
AAA_5	PF07728.14	gi|289596850|ref|YP_003483546.1|	-	0.00016	21.7	0.0	0.00079	19.4	0.0	2.3	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_3	PF07726.11	gi|289596850|ref|YP_003483546.1|	-	0.0035	17.2	0.0	0.01	15.7	0.0	1.8	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF3987	PF13148.6	gi|289596850|ref|YP_003483546.1|	-	0.0044	16.1	0.1	0.84	8.6	0.1	2.4	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF3987)
RuvB_N	PF05496.12	gi|289596850|ref|YP_003483546.1|	-	0.016	15.0	0.3	0.096	12.4	0.3	2.2	1	1	0	1	1	1	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
Sigma54_activat	PF00158.26	gi|289596850|ref|YP_003483546.1|	-	0.04	13.6	0.1	3.8	7.2	0.0	2.3	2	0	0	2	2	2	0	Sigma-54	interaction	domain
AAA_16	PF13191.6	gi|289596850|ref|YP_003483546.1|	-	0.069	13.5	0.0	0.24	11.8	0.0	1.9	1	0	0	1	1	1	0	AAA	ATPase	domain
NusA_N	PF08529.11	gi|289596850|ref|YP_003483546.1|	-	0.096	13.1	3.3	2.3	8.6	0.2	3.0	2	1	0	2	2	2	0	NusA	N-terminal	domain
AAA	PF00004.29	gi|289596850|ref|YP_003483546.1|	-	0.11	12.9	0.2	0.64	10.4	0.0	2.5	2	1	0	2	2	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_7	PF12775.7	gi|289596850|ref|YP_003483546.1|	-	0.17	11.4	0.2	0.73	9.3	0.0	2.1	2	0	0	2	2	2	0	P-loop	containing	dynein	motor	region
Zn-ribbon_8	PF09723.10	gi|289596850|ref|YP_003483546.1|	-	0.21	11.8	0.3	0.49	10.6	0.3	1.6	1	0	0	1	1	1	0	Zinc	ribbon	domain
AAA_22	PF13401.6	gi|289596851|ref|YP_003483547.1|	-	0.029	14.7	0.1	0.82	9.9	0.0	2.5	2	0	0	2	2	2	0	AAA	domain
tRNA-synt_1	PF00133.22	gi|289596853|ref|YP_003483549.1|	-	7.2e-130	434.1	2.6	1.2e-128	430.1	2.6	2.2	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.13	gi|289596853|ref|YP_003483549.1|	-	5.4e-35	120.6	5.4	1.1e-34	119.7	5.4	1.4	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.11	gi|289596853|ref|YP_003483549.1|	-	6.6e-21	74.5	11.7	6e-14	51.6	0.1	3.7	4	0	0	4	4	4	3	tRNA	synthetases	class	I	(M)
tRNA-synt_1_2	PF13603.6	gi|289596853|ref|YP_003483549.1|	-	9.3e-08	31.8	0.3	1e-05	25.2	0.0	2.9	2	1	1	3	3	3	1	Leucyl-tRNA	synthetase,	Domain	2
HxlR	PF01638.17	gi|289596853|ref|YP_003483549.1|	-	0.0042	16.9	0.2	0.91	9.4	0.1	2.9	3	0	0	3	3	3	1	HxlR-like	helix-turn-helix
tRNA-synt_1e	PF01406.19	gi|289596853|ref|YP_003483549.1|	-	0.008	15.6	0.0	0.13	11.6	0.0	2.5	3	0	0	3	3	3	1	tRNA	synthetases	class	I	(C)	catalytic	domain
DNA_ligase_ZBD	PF03119.16	gi|289596853|ref|YP_003483549.1|	-	0.02	14.9	1.9	2.1	8.4	0.1	2.9	3	0	0	3	3	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-ACC	PF17848.1	gi|289596853|ref|YP_003483549.1|	-	0.053	13.6	2.4	36	4.5	0.0	3.5	3	0	0	3	3	3	0	Acetyl-coA	carboxylase	zinc	finger	domain
zf-Mss51	PF13824.6	gi|289596853|ref|YP_003483549.1|	-	0.098	12.8	0.3	20	5.4	0.1	3.0	2	0	0	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
zinc_ribbon_2	PF13240.6	gi|289596853|ref|YP_003483549.1|	-	0.24	11.1	4.5	17	5.3	0.1	3.3	3	0	0	3	3	3	0	zinc-ribbon	domain
ApoC-I	PF04691.12	gi|289596853|ref|YP_003483549.1|	-	0.39	10.7	4.1	0.55	10.2	0.1	3.3	3	0	0	3	3	3	0	Apolipoprotein	C-I	(ApoC-1)
zf-ribbon_3	PF13248.6	gi|289596853|ref|YP_003483549.1|	-	3	7.4	7.6	3	7.4	0.2	2.7	3	0	0	3	3	3	0	zinc-ribbon	domain
zf-FPG_IleRS	PF06827.14	gi|289596853|ref|YP_003483549.1|	-	5.2	7.0	9.2	3.2	7.7	0.2	3.4	3	0	0	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
Metallophos_2	PF12850.7	gi|289596854|ref|YP_003483550.1|	-	3.2e-27	95.7	0.0	4.1e-27	95.4	0.0	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.28	gi|289596854|ref|YP_003483550.1|	-	1.7e-13	51.5	1.4	1.6e-12	48.4	1.4	2.0	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
FBPase_2	PF06874.11	gi|289596854|ref|YP_003483550.1|	-	0.00045	18.6	0.2	0.025	12.9	0.0	2.1	1	1	1	2	2	2	2	Firmicute	fructose-1,6-bisphosphatase
Pentapeptide_3	PF13576.6	gi|289596856|ref|YP_003483552.1|	-	2.2e-13	50.1	17.7	9.9e-09	35.2	8.7	6.3	3	2	2	5	5	5	4	Pentapeptide	repeats	(9	copies)
Pentapeptide	PF00805.22	gi|289596856|ref|YP_003483552.1|	-	0.15	11.7	2.5	69	3.2	0.0	4.1	4	1	0	4	4	4	0	Pentapeptide	repeats	(8	copies)
DDE_Tnp_1	PF01609.21	gi|289596857|ref|YP_003483553.1|	-	2e-22	79.9	1.4	2.5e-22	79.6	0.3	1.7	2	0	0	2	2	2	1	Transposase	DDE	domain
DDE_Tnp_1_6	PF13751.6	gi|289596857|ref|YP_003483553.1|	-	0.0029	17.8	0.1	0.0078	16.4	0.0	1.8	2	0	0	2	2	2	1	Transposase	DDE	domain
DUF772	PF05598.11	gi|289596857|ref|YP_003483553.1|	-	0.0067	16.4	0.5	0.015	15.3	0.5	1.5	1	0	0	1	1	1	1	Transposase	domain	(DUF772)
Phage_GPA	PF05840.13	gi|289596857|ref|YP_003483553.1|	-	0.074	12.1	0.2	0.12	11.5	0.2	1.3	1	0	0	1	1	1	0	Bacteriophage	replication	gene	A	protein	(GPA)
Ion_trans_2	PF07885.16	gi|289596858|ref|YP_003483554.1|	-	2e-12	46.9	9.1	2e-12	46.9	9.1	1.5	1	1	0	1	1	1	1	Ion	channel
Peptidase_A24	PF01478.18	gi|289596858|ref|YP_003483554.1|	-	0.35	11.3	5.3	0.45	10.9	5.3	1.2	1	0	0	1	1	1	0	Type	IV	leader	peptidase	family
Hydrolase_6	PF13344.6	gi|289596859|ref|YP_003483555.1|	-	5.6e-29	100.2	0.2	1.8e-27	95.4	0.0	2.4	2	1	0	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.6	gi|289596859|ref|YP_003483555.1|	-	8.6e-13	48.2	0.0	2.2e-12	46.8	0.0	1.7	1	0	0	1	1	1	1	HAD-hyrolase-like
Hydrolase	PF00702.26	gi|289596859|ref|YP_003483555.1|	-	5.5e-05	23.6	0.4	0.0013	19.1	0.4	3.0	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
PGP_phosphatase	PF09419.10	gi|289596859|ref|YP_003483555.1|	-	7.2e-05	22.5	0.2	0.00024	20.7	0.0	1.9	2	0	0	2	2	2	1	Mitochondrial	PGP	phosphatase
Hydrolase_3	PF08282.12	gi|289596859|ref|YP_003483555.1|	-	0.0038	17.0	0.0	0.0059	16.4	0.0	1.4	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD_2	PF13419.6	gi|289596859|ref|YP_003483555.1|	-	0.019	15.0	0.5	1.7	8.7	0.0	2.3	2	0	0	2	2	2	0	Haloacid	dehalogenase-like	hydrolase
FAA_hydrolase	PF01557.18	gi|289596860|ref|YP_003483556.1|	-	3.4e-68	229.6	0.0	3.9e-68	229.4	0.0	1.0	1	0	0	1	1	1	1	Fumarylacetoacetate	(FAA)	hydrolase	family
DUF373	PF04123.13	gi|289596861|ref|YP_003483557.1|	-	2.1e-106	356.2	13.9	2.5e-106	355.9	13.9	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF373)
L_lactis_ph-MCP	PF06673.11	gi|289596861|ref|YP_003483557.1|	-	0.093	11.7	0.0	0.14	11.1	0.0	1.2	1	0	0	1	1	1	0	Lactococcus	lactis	bacteriophage	major	capsid	protein
RMMBL	PF07521.12	gi|289596861|ref|YP_003483557.1|	-	0.12	12.3	0.0	0.27	11.2	0.0	1.5	1	0	0	1	1	1	0	Zn-dependent	metallo-hydrolase	RNA	specificity	domain
MAF_flag10	PF01973.18	gi|289596862|ref|YP_003483558.1|	-	2.6e-21	76.1	0.1	3.5e-21	75.6	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF115
DUF2070	PF09843.9	gi|289596863|ref|YP_003483559.1|	-	8.2	4.6	13.9	10	4.2	13.9	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
MJ1316	PF04457.12	gi|289596864|ref|YP_003483560.1|	-	1.3e-11	45.0	0.5	1.5e-11	44.8	0.5	1.1	1	0	0	1	1	1	1	MJ1316	RNA	cyclic	group	end	recognition	domain
DUF2085	PF09858.9	gi|289596865|ref|YP_003483561.1|	-	1.9e-27	95.5	5.7	1.9e-27	95.5	5.7	1.7	2	0	0	2	2	2	1	Predicted	membrane	protein	(DUF2085)
Sterol-sensing	PF12349.8	gi|289596865|ref|YP_003483561.1|	-	0.031	14.1	1.2	0.031	14.1	1.2	1.7	2	0	0	2	2	2	0	Sterol-sensing	domain	of	SREBP	cleavage-activation
AA_kinase	PF00696.28	gi|289596866|ref|YP_003483562.1|	-	4.8e-22	78.7	0.1	1.8e-15	57.2	0.0	2.0	1	1	0	2	2	2	2	Amino	acid	kinase	family
GvpD	PF07088.11	gi|289596867|ref|YP_003483563.1|	-	6.8e-24	84.3	1.1	3.8e-21	75.3	0.3	2.3	1	1	0	2	2	2	2	GvpD	gas	vesicle	protein
ATPase	PF06745.13	gi|289596867|ref|YP_003483563.1|	-	4.5e-12	45.8	1.8	3.9e-11	42.8	0.3	2.8	2	1	0	2	2	2	1	KaiC
RNA_helicase	PF00910.22	gi|289596867|ref|YP_003483563.1|	-	0.0028	18.0	0.0	0.0073	16.7	0.0	1.8	1	0	0	1	1	1	1	RNA	helicase
DUF2075	PF09848.9	gi|289596867|ref|YP_003483563.1|	-	0.0066	15.7	0.0	0.0095	15.2	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_22	PF13401.6	gi|289596867|ref|YP_003483563.1|	-	0.015	15.5	0.1	0.093	13.0	0.0	2.2	2	1	0	2	2	2	0	AAA	domain
ResIII	PF04851.15	gi|289596867|ref|YP_003483563.1|	-	0.018	15.0	0.1	0.058	13.4	0.0	1.9	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
Sigma54_activ_2	PF14532.6	gi|289596867|ref|YP_003483563.1|	-	0.029	14.5	0.0	0.057	13.5	0.0	1.5	1	0	0	1	1	1	0	Sigma-54	interaction	domain
AAA_11	PF13086.6	gi|289596867|ref|YP_003483563.1|	-	0.044	13.6	0.0	0.076	12.8	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA	PF00004.29	gi|289596867|ref|YP_003483563.1|	-	0.077	13.4	0.1	0.22	12.0	0.1	1.8	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_24	PF13479.6	gi|289596867|ref|YP_003483563.1|	-	0.1	12.3	0.6	0.26	11.0	0.6	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_16	PF13191.6	gi|289596867|ref|YP_003483563.1|	-	0.12	12.8	0.0	0.24	11.8	0.0	1.5	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_33	PF13671.6	gi|289596867|ref|YP_003483563.1|	-	0.13	12.4	0.0	0.2	11.8	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
Response_reg	PF00072.24	gi|289596868|ref|YP_003483564.1|	-	1.2e-25	89.9	1.3	1.4e-25	89.6	1.3	1.0	1	0	0	1	1	1	1	Response	regulator	receiver	domain
HydF_dimer	PF18128.1	gi|289596868|ref|YP_003483564.1|	-	0.0036	17.3	0.4	0.23	11.6	0.2	2.3	1	1	1	2	2	2	1	Hydrogen	maturase	F	dimerization	domain
SRP54	PF00448.22	gi|289596868|ref|YP_003483564.1|	-	0.0094	15.6	0.6	0.012	15.3	0.6	1.1	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
CoA_binding_2	PF13380.6	gi|289596868|ref|YP_003483564.1|	-	0.028	14.9	0.0	0.037	14.5	0.0	1.3	1	0	0	1	1	1	0	CoA	binding	domain
B12-binding	PF02310.19	gi|289596868|ref|YP_003483564.1|	-	0.071	13.2	0.1	0.098	12.7	0.1	1.3	1	1	0	1	1	1	0	B12	binding	domain
T6PP_N	PF18572.1	gi|289596868|ref|YP_003483564.1|	-	0.11	12.4	1.0	0.16	11.8	1.0	1.3	1	0	0	1	1	1	0	Trehalose-6-phosphate	phosphatase	N-terminal	helical	bundle	domain
DUF835	PF05763.12	gi|289596869|ref|YP_003483565.1|	-	7.6e-19	67.8	4.7	5.9e-12	45.5	0.1	2.8	1	1	0	2	2	2	2	Protein	of	unknown	function	(DUF835)
PAPS_reduct	PF01507.19	gi|289596870|ref|YP_003483566.1|	-	3.4e-40	137.9	0.0	6.1e-40	137.1	0.0	1.4	1	0	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
PUA	PF01472.20	gi|289596870|ref|YP_003483566.1|	-	6.2e-22	77.3	0.9	1.2e-21	76.4	0.3	1.8	2	0	0	2	2	2	1	PUA	domain
Fer4_7	PF12838.7	gi|289596870|ref|YP_003483566.1|	-	1.8e-06	28.4	7.4	1.8e-06	28.4	7.4	2.3	2	0	0	2	2	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|289596870|ref|YP_003483566.1|	-	5.7e-06	26.4	16.4	4.4e-05	23.6	8.8	2.8	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4	PF00037.27	gi|289596870|ref|YP_003483566.1|	-	2.9e-05	23.7	2.2	2.9e-05	23.7	2.2	3.9	4	0	0	4	4	4	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|289596870|ref|YP_003483566.1|	-	3.4e-05	23.9	9.2	3.4e-05	23.9	9.2	2.5	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.6	gi|289596870|ref|YP_003483566.1|	-	0.00027	21.1	0.9	0.00057	20.1	0.9	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.6	gi|289596870|ref|YP_003483566.1|	-	0.0026	17.8	0.3	0.0026	17.8	0.3	3.2	4	0	0	4	4	3	2	4Fe-4S	dicluster	domain
QueC	PF06508.13	gi|289596870|ref|YP_003483566.1|	-	0.0048	16.4	0.0	0.013	15.1	0.0	1.7	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
Fer4_2	PF12797.7	gi|289596870|ref|YP_003483566.1|	-	0.012	15.6	0.8	0.012	15.6	0.8	3.7	4	1	0	4	4	3	0	4Fe-4S	binding	domain
UPF0113	PF03657.13	gi|289596870|ref|YP_003483566.1|	-	0.013	15.8	0.0	0.045	14.0	0.0	1.9	2	0	0	2	2	2	0	UPF0113	PUA	domain
Fer4_6	PF12837.7	gi|289596870|ref|YP_003483566.1|	-	0.017	15.1	2.0	0.017	15.1	2.0	3.8	4	0	0	4	4	4	0	4Fe-4S	binding	domain
Fer4_16	PF13484.6	gi|289596870|ref|YP_003483566.1|	-	0.039	14.9	0.4	0.039	14.9	0.4	3.3	3	1	1	4	4	2	0	4Fe-4S	double	cluster	binding	domain
Fer4_17	PF13534.6	gi|289596870|ref|YP_003483566.1|	-	2.4	8.7	19.4	0.23	12.0	0.9	3.2	2	1	2	4	4	3	0	4Fe-4S	dicluster	domain
ETF_QO	PF05187.13	gi|289596870|ref|YP_003483566.1|	-	5.2	7.3	5.7	46	4.2	0.1	2.5	1	1	1	2	2	2	0	Electron	transfer	flavoprotein-ubiquinone	oxidoreductase,	4Fe-4S
Fer4_13	PF13370.6	gi|289596870|ref|YP_003483566.1|	-	5.8	7.5	8.4	5.2	7.7	0.5	2.6	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
HTH_DeoR	PF08220.12	gi|289596871|ref|YP_003483567.1|	-	0.011	15.4	1.0	0.017	14.9	0.0	1.8	3	0	0	3	3	3	0	DeoR-like	helix-turn-helix	domain
TrmB	PF01978.19	gi|289596871|ref|YP_003483567.1|	-	0.018	14.9	0.1	0.034	14.0	0.0	1.5	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
PaaX	PF07848.12	gi|289596871|ref|YP_003483567.1|	-	0.02	15.1	0.1	0.19	12.0	0.0	2.1	1	1	1	2	2	2	0	PaaX-like	protein
DUF4423	PF14394.6	gi|289596871|ref|YP_003483567.1|	-	0.023	14.4	0.0	0.073	12.8	0.0	1.7	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4423)
TFIIE_alpha	PF02002.17	gi|289596871|ref|YP_003483567.1|	-	0.026	14.4	0.7	0.067	13.1	0.1	1.8	2	0	0	2	2	2	0	TFIIE	alpha	subunit
RuvB_C	PF05491.13	gi|289596871|ref|YP_003483567.1|	-	0.026	14.4	0.2	0.056	13.3	0.0	1.7	2	0	0	2	2	2	0	RuvB	C-terminal	winged	helix	domain
DUF505	PF04458.12	gi|289596871|ref|YP_003483567.1|	-	0.034	12.5	0.0	0.036	12.4	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF505)
HTH_IclR	PF09339.10	gi|289596871|ref|YP_003483567.1|	-	0.043	13.6	0.1	0.11	12.4	0.0	1.7	2	0	0	2	2	2	0	IclR	helix-turn-helix	domain
DUF977	PF06163.11	gi|289596871|ref|YP_003483567.1|	-	0.054	13.4	0.1	0.057	13.4	0.1	1.2	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF977)
HTH_20	PF12840.7	gi|289596871|ref|YP_003483567.1|	-	0.095	12.8	0.2	5.8	7.1	0.0	2.4	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_5	PF01022.20	gi|289596871|ref|YP_003483567.1|	-	0.29	11.0	2.0	3.1	7.7	0.0	2.8	3	0	0	3	3	3	0	Bacterial	regulatory	protein,	arsR	family
dUTPase	PF00692.19	gi|289596872|ref|YP_003483568.1|	-	1.3e-08	34.5	0.0	2e-08	34.0	0.0	1.3	1	1	0	1	1	1	1	dUTPase
Tubulin	PF00091.25	gi|289596873|ref|YP_003483569.1|	-	1.8e-18	67.5	0.1	2.9e-18	66.8	0.1	1.2	1	0	0	1	1	1	1	Tubulin/FtsZ	family,	GTPase	domain
HGD-D	PF06050.13	gi|289596873|ref|YP_003483569.1|	-	0.053	13.3	0.2	8.3	6.1	0.1	2.2	1	1	1	2	2	2	0	2-hydroxyglutaryl-CoA	dehydratase,	D-component
RHH_1	PF01402.21	gi|289596874|ref|YP_003483570.1|	-	0.0004	20.2	0.6	0.0015	18.4	0.6	2.0	1	1	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
RHH_8	PF17723.1	gi|289596874|ref|YP_003483570.1|	-	0.0014	18.8	0.1	0.0025	18.0	0.0	1.4	1	1	0	1	1	1	1	Ribbon-Helix-Helix	transcriptional	regulator	family
SCP2	PF02036.17	gi|289596875|ref|YP_003483571.1|	-	1.2e-06	28.9	2.1	1.3e-06	28.8	2.1	1.1	1	0	0	1	1	1	1	SCP-2	sterol	transfer	family
Calycin_like	PF13944.6	gi|289596875|ref|YP_003483571.1|	-	0.021	15.1	0.3	0.026	14.9	0.3	1.2	1	0	0	1	1	1	0	Calycin-like	beta-barrel	domain
CobA_CobO_BtuR	PF02572.15	gi|289596876|ref|YP_003483572.1|	-	1.5e-63	214.1	1.0	1.7e-63	214.0	1.0	1.0	1	0	0	1	1	1	1	ATP:corrinoid	adenosyltransferase	BtuR/CobO/CobP
AAA_31	PF13614.6	gi|289596876|ref|YP_003483572.1|	-	0.0055	16.6	4.3	0.14	12.1	4.3	2.4	1	1	0	1	1	1	1	AAA	domain
CbiA	PF01656.23	gi|289596876|ref|YP_003483572.1|	-	0.016	15.3	2.7	0.099	12.7	2.7	2.2	1	1	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ERG2_Sigma1R	PF04622.12	gi|289596876|ref|YP_003483572.1|	-	0.019	14.3	0.0	0.023	14.0	0.0	1.2	1	0	0	1	1	1	0	ERG2	and	Sigma1	receptor	like	protein
SRP54	PF00448.22	gi|289596876|ref|YP_003483572.1|	-	0.05	13.2	0.7	0.092	12.4	0.7	1.6	1	1	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
ATP-synt_DE	PF00401.20	gi|289596876|ref|YP_003483572.1|	-	0.06	13.6	0.1	0.11	12.8	0.1	1.4	1	0	0	1	1	1	0	ATP	synthase,	Delta/Epsilon	chain,	long	alpha-helix	domain
AAA_24	PF13479.6	gi|289596876|ref|YP_003483572.1|	-	0.076	12.7	0.2	0.23	11.1	0.1	1.7	1	1	1	2	2	2	0	AAA	domain
IstB_IS21	PF01695.17	gi|289596876|ref|YP_003483572.1|	-	0.083	12.6	1.5	7	6.3	0.0	2.1	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
MS_channel	PF00924.18	gi|289596877|ref|YP_003483573.1|	-	4e-49	167.0	1.9	4e-49	167.0	1.9	1.5	2	0	0	2	2	2	1	Mechanosensitive	ion	channel
DUF3810	PF12725.7	gi|289596877|ref|YP_003483573.1|	-	0.16	11.3	6.2	0.28	10.5	6.2	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3810)
TRP	PF06011.12	gi|289596877|ref|YP_003483573.1|	-	0.19	10.4	7.1	0.23	10.1	7.1	1.1	1	0	0	1	1	1	0	Transient	receptor	potential	(TRP)	ion	channel
Radical_SAM	PF04055.21	gi|289596878|ref|YP_003483574.1|	-	9.4e-38	130.2	1.2	1.5e-37	129.5	0.4	1.8	2	0	0	2	2	2	1	Radical	SAM	superfamily
Mob_synth_C	PF06463.13	gi|289596878|ref|YP_003483574.1|	-	2.8e-23	82.2	0.1	4.6e-23	81.6	0.1	1.4	1	0	0	1	1	1	1	Molybdenum	Cofactor	Synthesis	C
Fer4_14	PF13394.6	gi|289596878|ref|YP_003483574.1|	-	5.1e-09	36.3	0.3	1.3e-08	35.0	0.0	1.8	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.6	gi|289596878|ref|YP_003483574.1|	-	1.7e-08	34.8	0.0	3.1e-08	34.0	0.0	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Penicillinase_R	PF03965.16	gi|289596880|ref|YP_003483576.1|	-	0.071	13.5	0.2	2.5	8.5	0.0	2.9	3	0	0	3	3	3	0	Penicillinase	repressor
AAA_14	PF13173.6	gi|289596882|ref|YP_003483578.1|	-	1.2e-07	31.9	0.0	2.8e-07	30.6	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|289596882|ref|YP_003483578.1|	-	0.001	19.3	0.0	1.6	9.0	0.0	2.5	1	1	1	2	2	2	2	AAA	domain
AAA_24	PF13479.6	gi|289596882|ref|YP_003483578.1|	-	0.0061	16.3	0.0	0.013	15.2	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
DUF234	PF03008.14	gi|289596882|ref|YP_003483578.1|	-	0.0078	16.6	0.1	0.022	15.2	0.1	1.8	1	1	0	1	1	1	1	Archaea	bacterial	proteins	of	unknown	function
DUF4143	PF13635.6	gi|289596882|ref|YP_003483578.1|	-	0.015	15.4	0.1	0.029	14.5	0.1	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4143)
Viral_helicase1	PF01443.18	gi|289596882|ref|YP_003483578.1|	-	0.037	13.8	0.0	0.067	12.9	0.0	1.4	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
RHH_1	PF01402.21	gi|289596883|ref|YP_003483579.1|	-	2.4e-05	24.1	3.3	2.6e-05	24.0	1.8	1.8	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
Colicin	PF01024.19	gi|289596883|ref|YP_003483579.1|	-	0.0031	17.4	0.4	0.0046	16.9	0.4	1.3	1	0	0	1	1	1	1	Colicin	pore	forming	domain
ALS2CR8	PF15299.6	gi|289596883|ref|YP_003483579.1|	-	0.0049	16.8	0.2	0.0069	16.3	0.2	1.3	1	0	0	1	1	1	1	Amyotrophic	lateral	sclerosis	2	chromosomal	region	candidate	gene	8
CPSF73-100_C	PF11718.8	gi|289596883|ref|YP_003483579.1|	-	0.023	14.3	0.1	0.032	13.8	0.1	1.2	1	0	0	1	1	1	0	Pre-mRNA	3'-end-processing	endonuclease	polyadenylation	factor	C-term
PSK_trans_fac	PF07704.11	gi|289596883|ref|YP_003483579.1|	-	0.18	12.5	1.5	2.3	9.0	1.5	2.3	1	1	0	1	1	1	0	Rv0623-like	transcription	factor
NosD	PF05048.13	gi|289596884|ref|YP_003483580.1|	-	4.4e-40	137.4	97.6	6.3e-32	110.8	44.3	5.3	2	1	3	5	5	5	4	Periplasmic	copper-binding	protein	(NosD)
Beta_helix	PF13229.6	gi|289596884|ref|YP_003483580.1|	-	2.2e-36	125.1	104.5	2e-19	70.0	27.5	4.9	3	2	2	5	5	5	3	Right	handed	beta	helix	region
Peptidase_C1	PF00112.23	gi|289596884|ref|YP_003483580.1|	-	1.4e-07	31.8	1.7	4.2e-07	30.3	1.7	1.7	1	0	0	1	1	1	1	Papain	family	cysteine	protease
fn3	PF00041.21	gi|289596884|ref|YP_003483580.1|	-	2.6e-05	24.5	2.1	2.6e-05	24.5	2.1	3.0	2	0	0	2	2	2	1	Fibronectin	type	III	domain
Peptidase_C1_2	PF03051.15	gi|289596884|ref|YP_003483580.1|	-	0.0002	20.3	0.1	0.00036	19.4	0.1	1.3	1	0	0	1	1	1	1	Peptidase	C1-like	family
RGI_lyase	PF18370.1	gi|289596884|ref|YP_003483580.1|	-	0.0037	17.5	1.2	0.009	16.3	0.3	2.2	2	0	0	2	2	2	1	Rhamnogalacturonan	I	lyases	beta-sheet	domain
Pectate_lyase_3	PF12708.7	gi|289596884|ref|YP_003483580.1|	-	0.0051	16.7	13.1	0.0051	16.7	13.1	5.0	4	2	2	6	6	6	2	Pectate	lyase	superfamily	protein
DUF4981	PF16353.5	gi|289596885|ref|YP_003483581.1|	-	0.035	14.6	0.0	0.037	14.5	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function(DUF4981)
Dak1_2	PF13684.6	gi|289596885|ref|YP_003483581.1|	-	0.13	11.4	0.0	0.14	11.2	0.0	1.1	1	0	0	1	1	1	0	Dihydroxyacetone	kinase	family
AAA_14	PF13173.6	gi|289596887|ref|YP_003483583.1|	-	8.8e-39	132.5	0.5	8.8e-39	132.5	0.5	2.0	2	0	0	2	2	2	1	AAA	domain
DUF4143	PF13635.6	gi|289596887|ref|YP_003483583.1|	-	3.3e-08	33.7	0.9	2.8e-07	30.7	0.3	2.6	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4143)
MobB	PF03205.14	gi|289596887|ref|YP_003483583.1|	-	0.0012	18.7	0.3	0.011	15.7	0.1	2.4	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA	PF00004.29	gi|289596887|ref|YP_003483583.1|	-	0.078	13.4	0.0	0.23	11.9	0.0	1.8	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF3712	PF12505.8	gi|289596887|ref|YP_003483583.1|	-	0.14	12.4	0.0	2.8	8.2	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3712)
EcoEI_R_C	PF08463.10	gi|289596888|ref|YP_003483584.1|	-	0.0012	19.0	2.1	0.0012	19.0	2.1	1.1	1	0	0	1	1	1	1	EcoEI	R	protein	C-terminal
Unstab_antitox	PF09720.10	gi|289596888|ref|YP_003483584.1|	-	0.002	18.1	2.3	0.002	18.1	2.3	1.5	1	1	0	1	1	1	1	Putative	addiction	module	component
CdvA	PF18822.1	gi|289596888|ref|YP_003483584.1|	-	0.0036	17.1	1.4	0.0036	17.1	1.4	1.9	1	1	1	2	2	2	1	CdvA-like	coiled-coil	domain
TPR_MLP1_2	PF07926.12	gi|289596888|ref|YP_003483584.1|	-	0.0037	17.3	2.2	0.0047	17.0	2.2	1.1	1	0	0	1	1	1	1	TPR/MLP1/MLP2-like	protein
CCDC-167	PF15188.6	gi|289596888|ref|YP_003483584.1|	-	0.0049	17.2	5.6	0.0054	17.1	5.6	1.2	1	0	0	1	1	1	1	Coiled-coil	domain-containing	protein	167
EF-hand_7	PF13499.6	gi|289596888|ref|YP_003483584.1|	-	0.17	12.4	1.8	0.24	11.9	1.8	1.1	1	0	0	1	1	1	0	EF-hand	domain	pair
HTH_20	PF12840.7	gi|289596890|ref|YP_003483586.1|	-	0.012	15.7	0.0	0.017	15.2	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_17	PF12728.7	gi|289596890|ref|YP_003483586.1|	-	0.1	12.8	0.8	3.1	8.1	0.4	2.3	2	0	0	2	2	2	0	Helix-turn-helix	domain
HEAT_2	PF13646.6	gi|289596890|ref|YP_003483586.1|	-	0.11	12.9	0.0	0.18	12.2	0.0	1.3	1	0	0	1	1	1	0	HEAT	repeats
Phage_integrase	PF00589.22	gi|289596891|ref|YP_003483587.1|	-	6.4e-18	65.1	0.1	1.9e-17	63.6	0.0	1.7	2	0	0	2	2	2	1	Phage	integrase	family
Phage_int_SAM_1	PF02899.17	gi|289596891|ref|YP_003483587.1|	-	0.0022	18.2	5.1	0.003	17.8	0.5	3.0	4	1	0	4	4	4	1	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_4	PF13495.6	gi|289596891|ref|YP_003483587.1|	-	0.068	13.6	1.9	0.23	11.9	0.7	2.5	2	1	0	2	2	2	0	Phage	integrase,	N-terminal	SAM-like	domain
Zw10	PF06248.13	gi|289596891|ref|YP_003483587.1|	-	0.1	11.1	0.4	0.14	10.7	0.4	1.2	1	0	0	1	1	1	0	Centromere/kinetochore	Zw10
DUF4878	PF12870.7	gi|289596891|ref|YP_003483587.1|	-	0.12	12.7	1.2	0.29	11.5	1.0	1.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4878)
DUF4363	PF14276.6	gi|289596891|ref|YP_003483587.1|	-	0.2	11.8	3.1	0.18	12.0	0.6	2.3	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4363)
ELFV_dehydrog	PF00208.21	gi|289596893|ref|YP_003483589.1|	-	2.4e-75	253.4	0.6	3.1e-75	253.0	0.6	1.1	1	0	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
ELFV_dehydrog_N	PF02812.18	gi|289596893|ref|YP_003483589.1|	-	3.9e-49	165.8	0.0	8.1e-49	164.8	0.0	1.6	1	0	0	1	1	1	1	Glu/Leu/Phe/Val	dehydrogenase,	dimerisation	domain
2-Hacid_dh_C	PF02826.19	gi|289596893|ref|YP_003483589.1|	-	0.15	11.4	0.0	0.29	10.5	0.0	1.4	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
TIP49	PF06068.13	gi|289596894|ref|YP_003483590.1|	-	1.3e-140	468.6	2.9	1.6e-140	468.3	2.9	1.1	1	0	0	1	1	1	1	TIP49	P-loop	domain
TIP49_C	PF17856.1	gi|289596894|ref|YP_003483590.1|	-	3.7e-21	75.0	0.2	1.9e-20	72.8	0.1	2.3	2	0	0	2	2	2	1	TIP49	AAA-lid	domain
AAA	PF00004.29	gi|289596894|ref|YP_003483590.1|	-	7.2e-10	39.4	0.3	2.9e-07	31.0	0.0	2.6	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.12	gi|289596894|ref|YP_003483590.1|	-	1.9e-08	34.2	0.2	2.8e-06	27.2	0.1	2.5	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
DnaB_C	PF03796.15	gi|289596894|ref|YP_003483590.1|	-	7.3e-06	25.5	0.0	1.6e-05	24.4	0.0	1.6	1	0	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
AAA_22	PF13401.6	gi|289596894|ref|YP_003483590.1|	-	7.1e-05	23.1	0.1	0.11	12.8	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
AAA_16	PF13191.6	gi|289596894|ref|YP_003483590.1|	-	0.00018	21.9	0.2	0.0013	19.1	0.2	2.2	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_19	PF13245.6	gi|289596894|ref|YP_003483590.1|	-	0.00021	21.6	2.3	0.0046	17.3	2.3	2.4	1	1	0	1	1	1	1	AAA	domain
Zeta_toxin	PF06414.12	gi|289596894|ref|YP_003483590.1|	-	0.00035	19.9	0.1	0.0013	18.0	0.1	1.9	2	0	0	2	2	2	1	Zeta	toxin
AAA_33	PF13671.6	gi|289596894|ref|YP_003483590.1|	-	0.00097	19.3	0.0	0.003	17.7	0.0	1.9	2	0	0	2	2	1	1	AAA	domain
AAA_18	PF13238.6	gi|289596894|ref|YP_003483590.1|	-	0.0011	19.5	0.2	0.0055	17.2	0.1	2.4	2	1	0	2	2	2	1	AAA	domain
Mg_chelatase	PF01078.21	gi|289596894|ref|YP_003483590.1|	-	0.0025	17.2	0.2	0.1	12.0	0.1	2.3	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_25	PF13481.6	gi|289596894|ref|YP_003483590.1|	-	0.0046	16.5	0.1	0.014	15.0	0.0	1.8	2	0	0	2	2	1	1	AAA	domain
AAA_5	PF07728.14	gi|289596894|ref|YP_003483590.1|	-	0.005	16.8	0.1	0.43	10.6	0.0	2.7	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
T2SSE	PF00437.20	gi|289596894|ref|YP_003483590.1|	-	0.0062	15.6	0.6	0.58	9.2	0.1	2.7	1	1	1	2	2	2	1	Type	II/IV	secretion	system	protein
RNA_helicase	PF00910.22	gi|289596894|ref|YP_003483590.1|	-	0.0065	16.8	0.1	0.041	14.3	0.1	2.3	1	1	0	1	1	1	1	RNA	helicase
AAA_28	PF13521.6	gi|289596894|ref|YP_003483590.1|	-	0.0068	16.7	0.5	0.036	14.3	0.0	2.3	3	0	0	3	3	3	1	AAA	domain
AAA_30	PF13604.6	gi|289596894|ref|YP_003483590.1|	-	0.0075	16.0	0.3	2.7	7.6	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
NACHT	PF05729.12	gi|289596894|ref|YP_003483590.1|	-	0.01	15.7	0.0	0.024	14.6	0.0	1.6	1	0	0	1	1	1	0	NACHT	domain
ATPase	PF06745.13	gi|289596894|ref|YP_003483590.1|	-	0.012	15.0	0.1	0.04	13.3	0.1	1.9	1	0	0	1	1	1	0	KaiC
AAA_17	PF13207.6	gi|289596894|ref|YP_003483590.1|	-	0.013	15.9	2.9	0.02	15.3	0.1	2.8	3	1	0	3	3	3	0	AAA	domain
IstB_IS21	PF01695.17	gi|289596894|ref|YP_003483590.1|	-	0.015	15.1	0.1	0.037	13.7	0.1	1.6	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
DNA_pol3_delta	PF06144.13	gi|289596894|ref|YP_003483590.1|	-	0.017	14.9	0.0	0.042	13.6	0.0	1.6	1	0	0	1	1	1	0	DNA	polymerase	III,	delta	subunit
DUF2075	PF09848.9	gi|289596894|ref|YP_003483590.1|	-	0.036	13.3	0.0	0.055	12.7	0.0	1.4	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
Bac_DnaA	PF00308.18	gi|289596894|ref|YP_003483590.1|	-	0.04	13.8	0.5	1.9	8.3	0.2	2.4	2	0	0	2	2	2	0	Bacterial	dnaA	protein
Rad17	PF03215.15	gi|289596894|ref|YP_003483590.1|	-	0.043	13.7	0.0	0.082	12.8	0.0	1.4	1	0	0	1	1	1	0	Rad17	P-loop	domain
ABC_tran	PF00005.27	gi|289596894|ref|YP_003483590.1|	-	0.049	14.2	0.0	0.13	12.8	0.0	1.8	1	1	0	1	1	1	0	ABC	transporter
AAA_11	PF13086.6	gi|289596894|ref|YP_003483590.1|	-	0.051	13.4	0.5	0.15	11.9	0.5	2.0	1	1	0	1	1	1	0	AAA	domain
Sigma54_activat	PF00158.26	gi|289596894|ref|YP_003483590.1|	-	0.055	13.2	0.1	0.93	9.2	0.0	2.3	2	0	0	2	2	2	0	Sigma-54	interaction	domain
Hydin_ADK	PF17213.3	gi|289596894|ref|YP_003483590.1|	-	0.056	13.7	0.1	0.13	12.6	0.1	1.5	1	0	0	1	1	1	0	Hydin	Adenylate	kinase-like	domain
Mgm101p	PF06420.12	gi|289596894|ref|YP_003483590.1|	-	0.06	12.9	0.1	0.13	11.8	0.1	1.5	1	0	0	1	1	1	0	Mitochondrial	genome	maintenance	MGM101
TsaE	PF02367.17	gi|289596894|ref|YP_003483590.1|	-	0.07	13.1	0.0	0.17	11.9	0.0	1.6	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
Parvo_NS1	PF01057.17	gi|289596894|ref|YP_003483590.1|	-	0.089	11.9	0.0	0.16	11.0	0.0	1.3	1	0	0	1	1	1	0	Parvovirus	non-structural	protein	NS1
AAA_7	PF12775.7	gi|289596894|ref|YP_003483590.1|	-	0.09	12.3	0.1	0.81	9.2	0.0	2.2	2	0	0	2	2	2	0	P-loop	containing	dynein	motor	region
EamA	PF00892.20	gi|289596895|ref|YP_003483591.1|	-	7.9e-34	116.8	45.0	2e-20	73.4	21.1	2.0	2	0	0	2	2	2	2	EamA-like	transporter	family
RseC_MucC	PF04246.12	gi|289596895|ref|YP_003483591.1|	-	0.011	15.7	0.6	0.011	15.7	0.6	2.9	2	2	0	2	2	2	0	Positive	regulator	of	sigma(E),	RseC/MucC
Ost5	PF05251.12	gi|289596895|ref|YP_003483591.1|	-	0.031	14.5	0.0	0.031	14.5	0.0	4.3	3	1	2	5	5	5	0	Oligosaccharyltransferase	subunit	5
TMEM234	PF10639.9	gi|289596895|ref|YP_003483591.1|	-	0.4	10.7	7.6	0.16	12.0	0.4	2.8	3	0	0	3	3	3	0	Putative	transmembrane	family	234
DDE_Tnp_1	PF01609.21	gi|289596896|ref|YP_003483592.1|	-	1.3e-22	80.6	0.3	2.5e-22	79.6	0.3	1.5	1	0	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1_6	PF13751.6	gi|289596896|ref|YP_003483592.1|	-	0.0028	17.9	0.1	0.0078	16.4	0.0	1.8	2	0	0	2	2	2	1	Transposase	DDE	domain
DUF772	PF05598.11	gi|289596896|ref|YP_003483592.1|	-	0.01	15.8	0.3	0.022	14.7	0.3	1.5	1	0	0	1	1	1	0	Transposase	domain	(DUF772)
DEAD	PF00270.29	gi|289596897|ref|YP_003483593.1|	-	9.4e-34	116.7	0.0	2.7e-33	115.2	0.0	1.8	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.31	gi|289596897|ref|YP_003483593.1|	-	1.6e-20	73.5	0.0	1.9e-18	66.8	0.0	3.0	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
DEAD_assoc	PF08494.11	gi|289596897|ref|YP_003483593.1|	-	4e-16	59.4	0.0	7.8e-16	58.4	0.0	1.5	1	0	0	1	1	1	1	DEAD/H	associated
ResIII	PF04851.15	gi|289596897|ref|YP_003483593.1|	-	6.1e-07	29.6	0.0	1.4e-06	28.5	0.0	1.6	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
HypA	PF01155.19	gi|289596897|ref|YP_003483593.1|	-	0.033	14.2	0.0	0.079	13.0	0.0	1.6	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
AAA_19	PF13245.6	gi|289596897|ref|YP_003483593.1|	-	0.039	14.3	0.0	0.15	12.4	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
SecA_DEAD	PF07517.14	gi|289596897|ref|YP_003483593.1|	-	0.059	12.6	0.0	0.13	11.5	0.0	1.5	1	0	0	1	1	1	0	SecA	DEAD-like	domain
Zn-ribbon_8	PF09723.10	gi|289596897|ref|YP_003483593.1|	-	0.072	13.2	0.1	0.17	12.1	0.1	1.6	1	0	0	1	1	1	0	Zinc	ribbon	domain
zf-C2HC5	PF06221.13	gi|289596897|ref|YP_003483593.1|	-	0.17	11.9	0.2	0.35	10.9	0.2	1.4	1	0	0	1	1	1	0	Putative	zinc	finger	motif,	C2HC5-type
DUF4674	PF15719.5	gi|289596897|ref|YP_003483593.1|	-	4.5	7.3	6.6	0.47	10.5	1.4	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4674)
Asparaginase	PF00710.20	gi|289596898|ref|YP_003483594.1|	-	5e-64	215.4	0.0	6.7e-64	215.0	0.0	1.2	1	0	0	1	1	1	1	Asparaginase,	N-terminal
Asparaginase_C	PF17763.1	gi|289596898|ref|YP_003483594.1|	-	5.9e-26	90.9	0.0	1.2e-25	89.9	0.0	1.6	1	0	0	1	1	1	1	Glutaminase/Asparaginase	C-terminal	domain
GatD_N	PF18195.1	gi|289596898|ref|YP_003483594.1|	-	1.1e-19	69.4	1.5	4.8e-19	67.4	0.7	2.2	2	0	0	2	2	2	1	GatD	N-terminal	domain
GatB_N	PF02934.15	gi|289596899|ref|YP_003483595.1|	-	5.7e-65	219.4	0.2	8e-65	218.9	0.2	1.2	1	0	0	1	1	1	1	GatB/GatE	catalytic	domain
GatB_Yqey	PF02637.18	gi|289596899|ref|YP_003483595.1|	-	4.5e-10	39.6	2.9	1.8e-09	37.6	2.9	2.1	1	0	0	1	1	1	1	GatB	domain
GAD	PF02938.14	gi|289596899|ref|YP_003483595.1|	-	5.4e-07	29.8	0.2	1.9e-06	28.0	0.2	2.0	1	0	0	1	1	1	1	GAD	domain
MerR-DNA-bind	PF09278.11	gi|289596899|ref|YP_003483595.1|	-	0.072	13.6	0.1	1.3	9.6	0.2	2.8	2	0	0	2	2	2	0	MerR,	DNA	binding
YqeY	PF09424.10	gi|289596899|ref|YP_003483595.1|	-	0.11	12.6	5.3	0.17	12.0	0.4	2.9	2	0	0	2	2	2	0	Yqey-like	protein
Baculo_LEF-2	PF03041.14	gi|289596899|ref|YP_003483595.1|	-	0.14	11.8	0.2	0.47	10.1	0.2	1.9	1	0	0	1	1	1	0	lef-2
Peptidase_C25	PF01364.18	gi|289596900|ref|YP_003483596.1|	-	1.9e-65	221.5	10.7	3.6e-65	220.6	10.7	1.5	1	0	0	1	1	1	1	Peptidase	family	C25
CARDB	PF07705.11	gi|289596900|ref|YP_003483596.1|	-	2.8e-11	43.6	23.0	7.5e-07	29.4	0.5	6.5	7	0	0	7	7	4	2	CARDB
Propeptide_C25	PF08126.11	gi|289596900|ref|YP_003483596.1|	-	5.7e-09	35.4	1.5	1.3e-08	34.2	1.5	1.5	1	0	0	1	1	1	1	Propeptide_C25
CUB	PF00431.20	gi|289596900|ref|YP_003483596.1|	-	4.5e-07	30.2	0.1	1.3e-06	28.7	0.1	1.7	1	0	0	1	1	1	1	CUB	domain
DUF1664	PF07889.12	gi|289596900|ref|YP_003483596.1|	-	4.4e-06	26.8	15.8	0.0012	18.9	10.0	2.5	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF1664)
TolA_bind_tri	PF16331.5	gi|289596900|ref|YP_003483596.1|	-	9.1e-06	25.7	15.9	0.00073	19.6	0.4	2.5	1	1	1	2	2	2	2	TolA	binding	protein	trimerisation
Spc7	PF08317.11	gi|289596900|ref|YP_003483596.1|	-	1.1e-05	24.5	16.0	0.00011	21.2	15.3	2.2	1	1	0	1	1	1	1	Spc7	kinetochore	protein
CENP-F_leu_zip	PF10473.9	gi|289596900|ref|YP_003483596.1|	-	1.5e-05	25.0	11.3	0.0032	17.5	0.3	2.4	1	1	1	2	2	2	2	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
DUF4407	PF14362.6	gi|289596900|ref|YP_003483596.1|	-	2e-05	24.1	6.9	3.8e-05	23.2	6.9	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4407)
AAA_13	PF13166.6	gi|289596900|ref|YP_003483596.1|	-	2e-05	23.5	17.7	3e-05	22.9	17.7	1.1	1	0	0	1	1	1	1	AAA	domain
LPP	PF04728.13	gi|289596900|ref|YP_003483596.1|	-	2.1e-05	24.8	21.6	0.073	13.5	1.1	3.7	2	1	1	3	3	3	3	Lipoprotein	leucine-zipper
Big_3_4	PF13754.6	gi|289596900|ref|YP_003483596.1|	-	3.6e-05	23.4	0.7	0.087	12.6	0.1	4.3	4	0	0	4	4	3	1	Domain	of	unknown	function
FlaC_arch	PF05377.11	gi|289596900|ref|YP_003483596.1|	-	4.1e-05	23.9	20.2	0.0092	16.4	4.5	3.7	2	1	1	3	3	3	2	Flagella	accessory	protein	C	(FlaC)
HMMR_N	PF15905.5	gi|289596900|ref|YP_003483596.1|	-	5.5e-05	22.8	14.4	0.00011	21.7	14.4	1.5	1	0	0	1	1	1	1	Hyaluronan	mediated	motility	receptor	N-terminal
DUF3584	PF12128.8	gi|289596900|ref|YP_003483596.1|	-	5.8e-05	20.8	9.3	8e-05	20.4	9.3	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3584)
Big_6	PF17936.1	gi|289596900|ref|YP_003483596.1|	-	8e-05	22.8	2.7	8e-05	22.8	2.7	3.1	2	1	1	3	3	1	1	Bacterial	Ig	domain
DUF5082	PF16888.5	gi|289596900|ref|YP_003483596.1|	-	8.8e-05	22.8	25.9	0.00024	21.4	25.1	2.9	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF5082)
Lebercilin	PF15619.6	gi|289596900|ref|YP_003483596.1|	-	0.00014	21.6	8.9	0.00025	20.8	8.9	1.4	1	0	0	1	1	1	1	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
NPV_P10	PF05531.12	gi|289596900|ref|YP_003483596.1|	-	0.00017	22.0	25.7	0.63	10.5	12.7	3.6	1	1	1	2	2	2	1	Nucleopolyhedrovirus	P10	protein
TPR_MLP1_2	PF07926.12	gi|289596900|ref|YP_003483596.1|	-	0.00027	21.0	9.3	0.00027	21.0	9.3	2.4	2	1	1	3	3	2	1	TPR/MLP1/MLP2-like	protein
DUF1640	PF07798.11	gi|289596900|ref|YP_003483596.1|	-	0.00031	20.8	9.5	0.00058	20.0	9.5	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1640)
Laminin_II	PF06009.12	gi|289596900|ref|YP_003483596.1|	-	0.00031	20.8	15.3	0.00031	20.8	15.3	2.2	1	1	1	2	2	2	1	Laminin	Domain	II
Baculo_PEP_C	PF04513.12	gi|289596900|ref|YP_003483596.1|	-	0.00036	20.6	38.2	0.044	13.8	28.8	2.5	1	1	1	2	2	2	2	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Cast	PF10174.9	gi|289596900|ref|YP_003483596.1|	-	0.00042	18.7	9.2	0.00058	18.2	9.2	1.1	1	0	0	1	1	1	1	RIM-binding	protein	of	the	cytomatrix	active	zone
Taxilin	PF09728.9	gi|289596900|ref|YP_003483596.1|	-	0.0008	18.7	9.8	0.0011	18.2	9.8	1.1	1	0	0	1	1	1	1	Myosin-like	coiled-coil	protein
Apolipoprotein	PF01442.18	gi|289596900|ref|YP_003483596.1|	-	0.001	19.0	3.0	0.0016	18.3	3.0	1.2	1	0	0	1	1	1	1	Apolipoprotein	A1/A4/E	domain
Filament	PF00038.21	gi|289596900|ref|YP_003483596.1|	-	0.001	18.7	12.9	0.0052	16.4	2.6	2.1	1	1	1	2	2	2	1	Intermediate	filament	protein
BRE1	PF08647.11	gi|289596900|ref|YP_003483596.1|	-	0.0011	19.0	13.8	0.026	14.6	2.4	2.3	1	1	1	2	2	2	2	BRE1	E3	ubiquitin	ligase
TMF_TATA_bd	PF12325.8	gi|289596900|ref|YP_003483596.1|	-	0.0011	19.1	5.3	0.0011	19.1	5.3	2.3	1	1	1	2	2	2	2	TATA	element	modulatory	factor	1	TATA	binding
TRAP_beta	PF05753.14	gi|289596900|ref|YP_003483596.1|	-	0.0012	18.3	1.3	0.046	13.1	0.0	2.8	2	0	0	2	2	2	1	Translocon-associated	protein	beta	(TRAPB)
HAP1_N	PF04849.13	gi|289596900|ref|YP_003483596.1|	-	0.0013	18.0	10.2	0.0025	17.1	10.2	1.4	1	0	0	1	1	1	1	HAP1	N-terminal	conserved	region
Fib_alpha	PF08702.10	gi|289596900|ref|YP_003483596.1|	-	0.0013	18.9	17.4	0.0036	17.5	17.4	1.8	1	0	0	1	1	1	1	Fibrinogen	alpha/beta	chain	family
SlyX	PF04102.12	gi|289596900|ref|YP_003483596.1|	-	0.0015	19.1	9.5	0.26	11.9	5.3	2.6	1	1	1	2	2	2	1	SlyX
Tektin	PF03148.14	gi|289596900|ref|YP_003483596.1|	-	0.0018	17.1	11.1	0.0037	16.1	10.9	1.6	1	1	0	1	1	1	1	Tektin	family
FAM176	PF14851.6	gi|289596900|ref|YP_003483596.1|	-	0.0019	17.9	0.1	0.0047	16.6	0.1	1.7	1	0	0	1	1	1	1	FAM176	family
DUF812	PF05667.11	gi|289596900|ref|YP_003483596.1|	-	0.002	17.1	18.4	0.017	14.0	4.9	2.2	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF812)
CLZ	PF16526.5	gi|289596900|ref|YP_003483596.1|	-	0.0023	18.2	8.3	0.15	12.4	0.3	3.3	1	1	1	3	3	3	1	C-terminal	leucine	zipper	domain	of	cyclic	nucleotide-gated	channels
KASH_CCD	PF14662.6	gi|289596900|ref|YP_003483596.1|	-	0.0024	17.7	10.5	0.0041	17.0	10.5	1.3	1	0	0	1	1	1	1	Coiled-coil	region	of	CCDC155	or	KASH
MscS_porin	PF12795.7	gi|289596900|ref|YP_003483596.1|	-	0.0028	17.2	25.4	0.02	14.5	7.0	2.2	1	1	1	2	2	2	1	Mechanosensitive	ion	channel	porin	domain
Prominin	PF05478.11	gi|289596900|ref|YP_003483596.1|	-	0.0035	15.4	17.3	0.017	13.1	16.7	1.7	1	1	0	1	1	1	1	Prominin
Atg14	PF10186.9	gi|289596900|ref|YP_003483596.1|	-	0.0035	16.5	14.8	0.0073	15.4	14.2	1.6	1	1	1	2	2	2	2	Vacuolar	sorting	38	and	autophagy-related	subunit	14
DHR10	PF18595.1	gi|289596900|ref|YP_003483596.1|	-	0.0036	17.3	9.0	0.069	13.2	0.3	2.3	1	1	0	2	2	2	1	Designed	helical	repeat	protein	10	domain
Prefoldin_2	PF01920.20	gi|289596900|ref|YP_003483596.1|	-	0.0048	16.8	13.7	0.85	9.6	9.5	3.6	1	1	1	2	2	2	1	Prefoldin	subunit
DUF2730	PF10805.8	gi|289596900|ref|YP_003483596.1|	-	0.006	16.7	8.4	0.12	12.4	0.2	2.5	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF2730)
Prefoldin	PF02996.17	gi|289596900|ref|YP_003483596.1|	-	0.0069	16.3	15.5	0.54	10.2	0.2	3.5	1	1	2	3	3	3	1	Prefoldin	subunit
EzrA	PF06160.12	gi|289596900|ref|YP_003483596.1|	-	0.0072	14.6	17.9	0.032	12.4	4.1	2.0	1	1	1	2	2	2	1	Septation	ring	formation	regulator,	EzrA
Fez1	PF06818.15	gi|289596900|ref|YP_003483596.1|	-	0.0075	16.7	9.6	0.014	15.8	9.6	1.5	1	0	0	1	1	1	1	Fez1
Cadherin-like	PF12733.7	gi|289596900|ref|YP_003483596.1|	-	0.0087	16.6	0.4	0.0087	16.6	0.4	4.5	3	1	1	4	4	3	1	Cadherin-like	beta	sandwich	domain
Laminin_I	PF06008.14	gi|289596900|ref|YP_003483596.1|	-	0.0095	15.7	21.2	0.066	12.9	21.1	2.0	1	1	0	1	1	1	1	Laminin	Domain	I
Golgin_A5	PF09787.9	gi|289596900|ref|YP_003483596.1|	-	0.01	15.3	12.2	0.017	14.6	12.2	1.2	1	0	0	1	1	1	0	Golgin	subfamily	A	member	5
HOOK	PF05622.12	gi|289596900|ref|YP_003483596.1|	-	0.01	14.0	9.8	0.017	13.3	9.8	1.2	1	0	0	1	1	1	0	HOOK	protein
PspA_IM30	PF04012.12	gi|289596900|ref|YP_003483596.1|	-	0.011	15.4	5.3	0.052	13.1	5.3	1.9	1	1	0	1	1	1	0	PspA/IM30	family
Tweety	PF04906.13	gi|289596900|ref|YP_003483596.1|	-	0.011	14.4	3.4	0.021	13.5	3.4	1.4	1	0	0	1	1	1	0	Tweety
ADIP	PF11559.8	gi|289596900|ref|YP_003483596.1|	-	0.012	15.7	19.1	0.04	14.0	2.1	2.3	1	1	1	2	2	2	0	Afadin-	and	alpha	-actinin-Binding
Phage_GP20	PF06810.11	gi|289596900|ref|YP_003483596.1|	-	0.013	15.3	18.8	0.091	12.6	5.0	2.9	1	1	1	2	2	2	0	Phage	minor	structural	protein	GP20
DUF4349	PF14257.6	gi|289596900|ref|YP_003483596.1|	-	0.014	14.9	9.1	0.44	10.0	2.4	3.1	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF4349)
TMPIT	PF07851.13	gi|289596900|ref|YP_003483596.1|	-	0.016	14.5	11.2	0.1	11.8	1.9	2.3	1	1	1	2	2	2	0	TMPIT-like	protein
Exonuc_VII_L	PF02601.15	gi|289596900|ref|YP_003483596.1|	-	0.018	14.6	5.9	0.028	14.0	5.9	1.2	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
MPS2	PF17060.5	gi|289596900|ref|YP_003483596.1|	-	0.018	14.3	7.4	0.031	13.6	7.4	1.2	1	0	0	1	1	1	0	Monopolar	spindle	protein	2
HsbA	PF12296.8	gi|289596900|ref|YP_003483596.1|	-	0.019	15.4	25.3	0.065	13.7	4.3	3.8	1	1	2	3	3	3	0	Hydrophobic	surface	binding	protein	A
Fmp27_WPPW	PF10359.9	gi|289596900|ref|YP_003483596.1|	-	0.021	13.7	15.9	0.014	14.3	13.3	1.8	1	1	1	2	2	2	0	RNA	pol	II	promoter	Fmp27	protein	domain
ApoLp-III	PF07464.11	gi|289596900|ref|YP_003483596.1|	-	0.035	14.2	18.1	0.02	15.0	14.4	2.0	1	1	1	2	2	2	0	Apolipophorin-III	precursor	(apoLp-III)
DUF3450	PF11932.8	gi|289596900|ref|YP_003483596.1|	-	0.036	13.4	17.4	0.091	12.1	4.5	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3450)
ATG16	PF08614.11	gi|289596900|ref|YP_003483596.1|	-	0.038	14.2	11.3	0.15	12.3	11.3	1.8	1	1	0	1	1	1	0	Autophagy	protein	16	(ATG16)
Tup_N	PF08581.10	gi|289596900|ref|YP_003483596.1|	-	0.039	14.3	9.9	0.61	10.4	0.4	2.5	2	0	0	2	2	2	0	Tup	N-terminal
Rab5-bind	PF09311.11	gi|289596900|ref|YP_003483596.1|	-	0.04	13.3	10.4	0.063	12.7	10.4	1.2	1	0	0	1	1	1	0	Rabaptin-like	protein
HAUS-augmin3	PF14932.6	gi|289596900|ref|YP_003483596.1|	-	0.048	13.2	11.5	0.13	11.8	1.2	2.3	1	1	1	2	2	2	0	HAUS	augmin-like	complex	subunit	3
DUF4164	PF13747.6	gi|289596900|ref|YP_003483596.1|	-	0.05	13.9	6.1	0.016	15.4	1.7	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4164)
DUF2203	PF09969.9	gi|289596900|ref|YP_003483596.1|	-	0.053	14.3	4.9	4.5	8.0	2.4	2.7	1	1	1	2	2	2	0	Uncharacterized	conserved	protein	(DUF2203)
Nup88	PF10168.9	gi|289596900|ref|YP_003483596.1|	-	0.053	11.3	9.7	0.076	10.8	9.7	1.2	1	0	0	1	1	1	0	Nuclear	pore	component
DUF4232	PF14016.6	gi|289596900|ref|YP_003483596.1|	-	0.062	13.4	0.1	27	4.9	0.0	3.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4232)
DUF4795	PF16043.5	gi|289596900|ref|YP_003483596.1|	-	0.063	12.9	17.3	0.47	10.0	13.2	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4795)
DUF4140	PF13600.6	gi|289596900|ref|YP_003483596.1|	-	0.065	13.7	3.9	1.1e+02	3.4	3.8	3.9	1	1	0	1	1	1	0	N-terminal	domain	of	unknown	function	(DUF4140)
Spc24	PF08286.11	gi|289596900|ref|YP_003483596.1|	-	0.066	13.5	21.4	2	8.7	7.4	3.7	1	1	2	3	3	3	0	Spc24	subunit	of	Ndc80
GAS	PF13851.6	gi|289596900|ref|YP_003483596.1|	-	0.071	12.4	16.5	0.4	10.0	16.4	1.9	1	1	0	1	1	1	0	Growth-arrest	specific	micro-tubule	binding
HrpB7	PF09486.10	gi|289596900|ref|YP_003483596.1|	-	0.083	13.3	0.3	1	9.7	0.0	2.1	1	1	1	2	2	2	0	Bacterial	type	III	secretion	protein	(HrpB7)
MAD	PF05557.13	gi|289596900|ref|YP_003483596.1|	-	0.084	11.2	12.2	0.15	10.4	12.2	1.3	1	0	0	1	1	1	0	Mitotic	checkpoint	protein
BLOC1_2	PF10046.9	gi|289596900|ref|YP_003483596.1|	-	0.084	13.2	18.2	0.72	10.2	3.6	2.7	1	1	1	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
DLP_helical	PF18709.1	gi|289596900|ref|YP_003483596.1|	-	0.093	11.9	14.7	0.42	9.8	14.8	2.2	1	1	0	1	1	1	0	Dynamin-like	helical	domain
DUF4201	PF13870.6	gi|289596900|ref|YP_003483596.1|	-	0.11	12.3	15.3	1.8	8.2	11.4	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4201)
EMP24_GP25L	PF01105.24	gi|289596900|ref|YP_003483596.1|	-	0.11	12.4	9.0	0.52	10.2	1.6	2.9	1	1	1	2	2	2	0	emp24/gp25L/p24	family/GOLD
Wtap	PF17098.5	gi|289596900|ref|YP_003483596.1|	-	0.12	12.3	6.3	0.34	10.8	6.3	1.8	1	0	0	1	1	1	0	WTAP/Mum2p	family
FliJ	PF02050.16	gi|289596900|ref|YP_003483596.1|	-	0.15	12.2	11.2	0.26	11.5	0.3	2.3	1	1	1	2	2	2	0	Flagellar	FliJ	protein
Syntaxin	PF00804.25	gi|289596900|ref|YP_003483596.1|	-	0.16	11.7	14.2	0.2	11.3	6.0	2.2	1	1	1	2	2	2	0	Syntaxin
YabA	PF06156.13	gi|289596900|ref|YP_003483596.1|	-	0.16	12.6	13.6	1.9	9.2	2.2	2.6	1	1	1	2	2	2	0	Initiation	control	protein	YabA
DUF3053	PF11254.8	gi|289596900|ref|YP_003483596.1|	-	0.16	11.5	6.2	0.28	10.7	6.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3053)
DUF948	PF06103.11	gi|289596900|ref|YP_003483596.1|	-	0.16	12.3	17.2	6	7.2	4.5	3.6	1	1	2	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF948)
Spore_III_AB	PF09548.10	gi|289596900|ref|YP_003483596.1|	-	0.16	12.1	1.6	0.27	11.4	1.6	1.3	1	0	0	1	1	1	0	Stage	III	sporulation	protein	AB	(spore_III_AB)
CorA	PF01544.18	gi|289596900|ref|YP_003483596.1|	-	0.16	11.2	11.5	0.39	10.0	11.5	1.6	1	0	0	1	1	1	0	CorA-like	Mg2+	transporter	protein
DUF4988	PF16378.5	gi|289596900|ref|YP_003483596.1|	-	0.17	11.5	22.1	4.6	6.9	5.8	4.6	1	1	2	3	3	3	0	Domain	of	unknown	function
Bap31_Bap29_C	PF18035.1	gi|289596900|ref|YP_003483596.1|	-	0.2	11.7	1.8	4.4	7.4	0.0	2.6	1	1	1	2	2	2	0	Bap31/Bap29	cytoplasmic	coiled-coil	domain
Spectrin	PF00435.21	gi|289596900|ref|YP_003483596.1|	-	0.22	12.0	9.6	2.3	8.8	0.6	2.4	1	1	1	2	2	2	0	Spectrin	repeat
HCMV_UL139	PF12507.8	gi|289596900|ref|YP_003483596.1|	-	0.26	11.7	1.8	5.5	7.4	0.4	2.5	1	1	1	2	2	2	0	Human	Cytomegalovirus	UL139	protein
SF-assemblin	PF06705.11	gi|289596900|ref|YP_003483596.1|	-	0.27	10.6	23.8	0.18	11.1	17.9	1.9	1	1	1	2	2	2	0	SF-assemblin/beta	giardin
COG5	PF10392.9	gi|289596900|ref|YP_003483596.1|	-	0.29	11.3	13.2	3.6	7.8	0.9	2.4	1	1	1	2	2	2	0	Golgi	transport	complex	subunit	5
KxDL	PF10241.9	gi|289596900|ref|YP_003483596.1|	-	0.29	11.5	13.9	1.5	9.2	0.7	2.4	1	1	1	2	2	2	0	Uncharacterized	conserved	protein
PI_PP_I	PF18363.1	gi|289596900|ref|YP_003483596.1|	-	0.33	11.2	11.6	1.7	8.9	4.6	2.6	1	1	1	2	2	2	0	Phosphoinositide	phosphatase	insertion	domain
DUF4618	PF15397.6	gi|289596900|ref|YP_003483596.1|	-	0.38	10.1	12.5	4.8	6.5	5.4	2.7	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4618)
V-SNARE	PF05008.15	gi|289596900|ref|YP_003483596.1|	-	0.48	10.8	11.7	7.9	6.9	7.4	2.6	1	1	1	2	2	2	0	Vesicle	transport	v-SNARE	protein	N-terminus
YlqD	PF11068.8	gi|289596900|ref|YP_003483596.1|	-	0.48	10.8	16.3	4.2	7.8	1.4	2.4	1	1	1	2	2	2	0	YlqD	protein
COG7	PF10191.9	gi|289596900|ref|YP_003483596.1|	-	0.5	8.5	9.2	0.16	10.2	0.6	2.0	1	1	1	2	2	2	0	Golgi	complex	component	7	(COG7)
APG17	PF04108.12	gi|289596900|ref|YP_003483596.1|	-	0.53	9.3	17.4	1.4	7.9	17.5	1.5	1	1	0	1	1	1	0	Autophagy	protein	Apg17
UPF0242	PF06785.11	gi|289596900|ref|YP_003483596.1|	-	0.56	10.3	16.5	0.14	12.2	12.1	2.0	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0242)	N-terminus
DUF16	PF01519.16	gi|289596900|ref|YP_003483596.1|	-	0.59	10.7	17.9	0.27	11.7	1.7	2.6	1	1	1	2	2	2	0	Protein	of	unknown	function	DUF16
DUF2968	PF11180.8	gi|289596900|ref|YP_003483596.1|	-	0.59	9.7	8.9	0.43	10.2	0.1	2.3	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2968)
ASH	PF15780.5	gi|289596900|ref|YP_003483596.1|	-	0.61	10.3	4.6	2.5	8.4	0.3	3.3	3	0	0	3	3	2	0	Abnormal	spindle-like	microcephaly-assoc'd,	ASPM-SPD-2-Hydin
Snapin_Pallidin	PF14712.6	gi|289596900|ref|YP_003483596.1|	-	0.61	10.5	15.7	2.2	8.7	1.5	3.0	1	1	2	3	3	3	0	Snapin/Pallidin
Gp-FAR-1	PF05823.12	gi|289596900|ref|YP_003483596.1|	-	0.62	10.4	6.4	2.4	8.5	6.4	1.9	1	1	0	1	1	1	0	Nematode	fatty	acid	retinoid	binding	protein	(Gp-FAR-1)
Sec34	PF04136.15	gi|289596900|ref|YP_003483596.1|	-	0.63	9.9	14.9	2.8	7.8	3.7	2.3	1	1	1	2	2	2	0	Sec34-like	family
Cluap1	PF10234.9	gi|289596900|ref|YP_003483596.1|	-	0.66	9.3	12.1	0.17	11.2	0.5	2.2	1	1	1	2	2	2	0	Clusterin-associated	protein-1
FAM76	PF16046.5	gi|289596900|ref|YP_003483596.1|	-	0.66	9.3	13.7	3.4	7.0	0.4	2.2	1	1	1	2	2	2	0	FAM76	protein
HMMR_C	PF15908.5	gi|289596900|ref|YP_003483596.1|	-	0.87	9.8	7.1	15	5.8	0.4	2.6	1	1	0	2	2	2	0	Hyaluronan	mediated	motility	receptor	C-terminal
LMBR1	PF04791.16	gi|289596900|ref|YP_003483596.1|	-	0.91	8.4	8.7	1.9	7.3	8.7	1.5	1	0	0	1	1	1	0	LMBR1-like	membrane	protein
PI3K_P85_iSH2	PF16454.5	gi|289596900|ref|YP_003483596.1|	-	0.98	9.0	12.3	0.69	9.5	1.0	2.2	1	1	1	2	2	2	0	Phosphatidylinositol	3-kinase	regulatory	subunit	P85	inter-SH2	domain
AATF-Che1	PF13339.6	gi|289596900|ref|YP_003483596.1|	-	1	10.1	12.4	1.5	9.5	5.5	2.4	1	1	1	2	2	2	0	Apoptosis	antagonizing	transcription	factor
Occludin_ELL	PF07303.13	gi|289596900|ref|YP_003483596.1|	-	1	10.1	5.1	30	5.4	2.0	2.4	1	1	1	2	2	2	0	Occludin	homology	domain
Tho2	PF11262.8	gi|289596900|ref|YP_003483596.1|	-	1	8.5	14.2	0.028	13.6	1.6	2.3	1	1	1	2	2	2	0	Transcription	factor/nuclear	export	subunit	protein	2
DUF641	PF04859.12	gi|289596900|ref|YP_003483596.1|	-	1.3	9.4	8.0	6.4	7.1	0.5	2.5	1	1	1	2	2	2	0	Plant	protein	of	unknown	function	(DUF641)
COG2	PF06148.11	gi|289596900|ref|YP_003483596.1|	-	1.5	8.9	10.9	16	5.6	0.3	2.7	1	1	2	3	3	3	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
RmuC	PF02646.16	gi|289596900|ref|YP_003483596.1|	-	1.6	7.8	11.3	4.6	6.3	2.0	2.4	1	1	2	3	3	3	0	RmuC	family
bZIP_1	PF00170.21	gi|289596900|ref|YP_003483596.1|	-	1.6	8.9	9.4	6.1	7.0	1.7	3.3	1	1	3	4	4	4	0	bZIP	transcription	factor
DUF713	PF05218.14	gi|289596900|ref|YP_003483596.1|	-	1.8	8.3	10.3	3.6	7.3	10.3	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF713)
DUF745	PF05335.13	gi|289596900|ref|YP_003483596.1|	-	2.1	8.0	10.4	2.5	7.8	8.3	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF745)
Lectin_N	PF03954.14	gi|289596900|ref|YP_003483596.1|	-	2.3	8.0	12.9	0.22	11.3	4.5	2.4	1	1	1	2	2	2	0	Hepatic	lectin,	N-terminal	domain
CC2-LZ	PF16516.5	gi|289596900|ref|YP_003483596.1|	-	2.4	8.6	7.5	12	6.3	0.1	2.5	1	1	1	2	2	2	0	Leucine	zipper	of	domain	CC2	of	NEMO,	NF-kappa-B	essential	modulator
Seryl_tRNA_N	PF02403.22	gi|289596900|ref|YP_003483596.1|	-	2.5	8.3	19.0	4	7.7	5.1	2.6	1	1	1	2	2	2	0	Seryl-tRNA	synthetase	N-terminal	domain
DUF4559	PF15112.6	gi|289596900|ref|YP_003483596.1|	-	2.6	7.7	11.7	6.2	6.4	11.8	1.5	2	0	0	2	2	1	0	Domain	of	unknown	function	(DUF4559)
XhlA	PF10779.9	gi|289596900|ref|YP_003483596.1|	-	2.7	8.3	34.3	0.029	14.6	8.2	3.7	2	1	2	4	4	3	0	Haemolysin	XhlA
RPW8	PF05659.11	gi|289596900|ref|YP_003483596.1|	-	2.7	7.7	10.1	7.6	6.2	1.4	3.1	1	1	3	4	4	4	0	Arabidopsis	broad-spectrum	mildew	resistance	protein	RPW8
SHE3	PF17078.5	gi|289596900|ref|YP_003483596.1|	-	2.7	7.7	19.2	9	5.9	19.2	1.7	1	1	0	1	1	1	0	SWI5-dependent	HO	expression	protein	3
DUF4156	PF13698.6	gi|289596900|ref|YP_003483596.1|	-	2.8	8.3	6.3	5.2	7.5	5.3	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4156)
Fzo_mitofusin	PF04799.13	gi|289596900|ref|YP_003483596.1|	-	2.8	7.5	10.3	4.2	6.9	7.3	2.3	1	1	1	2	2	2	0	fzo-like	conserved	region
WXG100	PF06013.12	gi|289596900|ref|YP_003483596.1|	-	3.1	8.1	12.0	7.1	6.9	1.2	3.5	2	1	1	3	3	2	0	Proteins	of	100	residues	with	WXG
GIT_CC	PF16559.5	gi|289596900|ref|YP_003483596.1|	-	4.1	7.4	19.4	1.4	8.9	0.4	3.5	1	1	2	3	3	3	0	GIT	coiled-coil	Rho	guanine	nucleotide	exchange	factor
FAP206	PF12018.8	gi|289596900|ref|YP_003483596.1|	-	4.1	6.8	7.4	2.9	7.3	5.1	1.8	1	1	1	2	2	2	0	Domain	of	unknown	function
DivIC	PF04977.15	gi|289596900|ref|YP_003483596.1|	-	4.5	7.1	18.9	2.6	7.9	0.1	4.0	1	1	2	3	3	3	0	Septum	formation	initiator
Mod_r	PF07200.13	gi|289596900|ref|YP_003483596.1|	-	4.5	7.4	15.3	4	7.5	13.2	1.9	1	1	1	2	2	2	0	Modifier	of	rudimentary	(Mod(r))	protein
DUF4446	PF14584.6	gi|289596900|ref|YP_003483596.1|	-	4.7	7.2	10.8	28	4.7	3.8	3.4	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF4446)
LXG	PF04740.12	gi|289596900|ref|YP_003483596.1|	-	5	6.8	22.8	1.3	8.7	8.7	2.3	1	1	1	2	2	2	0	LXG	domain	of	WXG	superfamily
Rootletin	PF15035.6	gi|289596900|ref|YP_003483596.1|	-	5.1	7.1	10.0	8.7	6.3	10.0	1.3	1	0	0	1	1	1	0	Ciliary	rootlet	component,	centrosome	cohesion
BST2	PF16716.5	gi|289596900|ref|YP_003483596.1|	-	5.2	7.7	13.2	22	5.7	0.1	2.7	1	1	1	2	2	2	0	Bone	marrow	stromal	antigen	2
Phage_Mu_Gam	PF07352.12	gi|289596900|ref|YP_003483596.1|	-	5.7	6.8	11.9	28	4.6	0.7	2.5	1	1	1	2	2	2	0	Bacteriophage	Mu	Gam	like	protein
Syntaxin-6_N	PF09177.11	gi|289596900|ref|YP_003483596.1|	-	5.9	7.5	12.2	1.9e+02	2.6	12.2	2.7	1	1	0	1	1	1	0	Syntaxin	6,	N-terminal
AKNA	PF12443.8	gi|289596900|ref|YP_003483596.1|	-	6	7.6	7.5	4.5	8.0	2.3	2.4	1	1	0	2	2	2	0	AT-hook-containing	transcription	factor
Nup54	PF13874.6	gi|289596900|ref|YP_003483596.1|	-	6.2	6.9	9.5	25	5.0	7.5	2.3	1	1	1	2	2	2	0	Nucleoporin	complex	subunit	54
Jnk-SapK_ap_N	PF09744.9	gi|289596900|ref|YP_003483596.1|	-	6.7	6.9	22.6	0.095	12.9	0.2	2.5	2	1	1	3	3	2	0	JNK_SAPK-associated	protein-1
Muted	PF14942.6	gi|289596900|ref|YP_003483596.1|	-	7	7.0	18.8	20	5.5	3.1	2.6	1	1	1	2	2	2	0	Organelle	biogenesis,	Muted-like	protein
STAT_alpha	PF01017.20	gi|289596900|ref|YP_003483596.1|	-	7.2	6.5	16.0	0.59	10.0	2.5	2.2	1	1	1	2	2	2	0	STAT	protein,	all-alpha	domain
Uds1	PF15456.6	gi|289596900|ref|YP_003483596.1|	-	7.9	6.7	7.0	4.3	7.5	2.8	2.2	1	1	1	2	2	2	0	Up-regulated	During	Septation
GCN5L1	PF06320.13	gi|289596900|ref|YP_003483596.1|	-	8.9	6.5	10.9	12	6.1	6.9	2.3	1	1	1	2	2	2	0	GCN5-like	protein	1	(GCN5L1)
End3	PF12761.7	gi|289596900|ref|YP_003483596.1|	-	8.9	6.4	12.3	2.7	8.1	0.6	3.0	1	1	2	3	3	3	0	Actin	cytoskeleton-regulatory	complex	protein	END3
DUF2205	PF10224.9	gi|289596900|ref|YP_003483596.1|	-	9	6.4	8.5	56	3.8	0.2	2.8	1	1	1	2	2	2	0	Short	coiled-coil	protein
RasGAP_C	PF03836.15	gi|289596900|ref|YP_003483596.1|	-	9.3	6.4	17.3	4.5	7.4	3.2	2.4	1	1	1	2	2	2	0	RasGAP	C-terminus
Vps51	PF08700.11	gi|289596900|ref|YP_003483596.1|	-	9.8	6.3	17.0	28	4.9	0.5	3.7	1	1	1	2	2	2	0	Vps51/Vps67
SKA1	PF07160.12	gi|289596900|ref|YP_003483596.1|	-	9.9	5.9	24.0	77	3.0	21.4	3.0	2	1	1	3	3	2	0	Spindle	and	kinetochore-associated	protein	1
AAA_18	PF13238.6	gi|289596901|ref|YP_003483597.1|	-	1.6e-22	80.5	0.7	2.5e-22	79.8	0.7	1.3	1	0	0	1	1	1	1	AAA	domain
dNK	PF01712.19	gi|289596901|ref|YP_003483597.1|	-	4.5e-05	23.4	1.7	0.038	13.8	0.7	2.4	1	1	1	2	2	2	2	Deoxynucleoside	kinase
AAA_28	PF13521.6	gi|289596901|ref|YP_003483597.1|	-	0.00011	22.5	0.1	0.00036	20.8	0.0	1.9	1	1	0	2	2	2	1	AAA	domain
AAA_17	PF13207.6	gi|289596901|ref|YP_003483597.1|	-	0.00019	21.9	3.1	0.035	14.5	1.3	3.0	1	1	1	2	2	2	1	AAA	domain
AAA_33	PF13671.6	gi|289596901|ref|YP_003483597.1|	-	0.0005	20.3	0.1	0.95	9.6	0.0	2.4	1	1	1	2	2	2	2	AAA	domain
AAA	PF00004.29	gi|289596901|ref|YP_003483597.1|	-	0.00086	19.7	0.0	0.0018	18.7	0.0	1.6	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
ADK	PF00406.22	gi|289596901|ref|YP_003483597.1|	-	0.002	18.2	0.2	0.54	10.4	0.1	2.2	2	0	0	2	2	2	1	Adenylate	kinase
CPT	PF07931.12	gi|289596901|ref|YP_003483597.1|	-	0.003	17.4	0.1	1.7	8.4	0.0	2.2	1	1	0	2	2	2	2	Chloramphenicol	phosphotransferase-like	protein
CoaE	PF01121.20	gi|289596901|ref|YP_003483597.1|	-	0.0048	16.6	0.4	0.71	9.5	0.1	2.4	1	1	0	2	2	2	1	Dephospho-CoA	kinase
AAA_22	PF13401.6	gi|289596901|ref|YP_003483597.1|	-	0.0051	17.1	0.0	0.008	16.5	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
YiiD_C	PF09500.10	gi|289596901|ref|YP_003483597.1|	-	0.01	15.7	0.0	0.017	14.9	0.0	1.3	1	0	0	1	1	1	0	Putative	thioesterase	(yiiD_Cterm)
ABC_tran	PF00005.27	gi|289596901|ref|YP_003483597.1|	-	0.011	16.3	0.0	0.017	15.6	0.0	1.5	1	1	0	1	1	1	0	ABC	transporter
AAA_24	PF13479.6	gi|289596901|ref|YP_003483597.1|	-	0.011	15.4	0.1	0.013	15.2	0.1	1.4	1	1	0	1	1	1	0	AAA	domain
KTI12	PF08433.10	gi|289596901|ref|YP_003483597.1|	-	0.019	14.4	0.1	0.044	13.2	0.0	1.7	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
RuvB_N	PF05496.12	gi|289596901|ref|YP_003483597.1|	-	0.039	13.7	0.4	0.13	12.0	0.4	1.9	1	1	0	1	1	1	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
Mg_chelatase	PF01078.21	gi|289596901|ref|YP_003483597.1|	-	0.061	12.7	0.1	0.31	10.4	0.0	1.9	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
Ploopntkinase3	PF18751.1	gi|289596901|ref|YP_003483597.1|	-	0.12	12.3	0.0	12	5.8	0.0	2.2	1	1	1	2	2	2	0	P-loop	Nucleotide	Kinase3
Seryl_tRNA_N	PF02403.22	gi|289596901|ref|YP_003483597.1|	-	0.23	11.7	3.0	5.6	7.3	1.8	2.9	2	1	0	2	2	2	0	Seryl-tRNA	synthetase	N-terminal	domain
ATPase	PF06745.13	gi|289596901|ref|YP_003483597.1|	-	0.26	10.6	8.8	0.29	10.5	0.7	2.5	1	1	2	3	3	3	0	KaiC
NTPase_1	PF03266.15	gi|289596901|ref|YP_003483597.1|	-	0.92	9.4	4.5	1.8	8.5	0.7	2.5	2	1	1	3	3	3	0	NTPase
CDP-OH_P_transf	PF01066.21	gi|289596902|ref|YP_003483598.1|	-	5.7e-15	55.8	3.1	5.7e-15	55.8	3.1	2.6	2	1	0	2	2	2	1	CDP-alcohol	phosphatidyltransferase
DUF2070	PF09843.9	gi|289596902|ref|YP_003483598.1|	-	4.9	5.3	16.6	6	5.0	16.6	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
DNA_primase_lrg	PF04104.14	gi|289596903|ref|YP_003483599.1|	-	1e-35	123.5	0.1	2.2e-35	122.4	0.1	1.4	1	1	0	1	1	1	1	Eukaryotic	and	archaeal	DNA	primase,	large	subunit
Borrelia_REV	PF03978.13	gi|289596903|ref|YP_003483599.1|	-	0.026	14.5	0.8	0.52	10.3	0.0	2.2	2	0	0	2	2	2	0	Borrelia	burgdorferi	REV	protein
JmjN	PF02375.17	gi|289596903|ref|YP_003483599.1|	-	0.028	14.4	0.2	1.1	9.3	0.0	3.1	2	0	0	2	2	2	0	jmjN	domain
DUF3306	PF11748.8	gi|289596903|ref|YP_003483599.1|	-	0.083	13.8	0.5	0.15	12.9	0.5	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3306)
PYC_OADA	PF02436.18	gi|289596904|ref|YP_003483600.1|	-	1.5e-55	188.0	0.4	2.9e-55	187.1	0.4	1.4	1	0	0	1	1	1	1	Conserved	carboxylase	domain
HMGL-like	PF00682.19	gi|289596904|ref|YP_003483600.1|	-	4.8e-50	170.6	0.0	6.5e-50	170.1	0.0	1.2	1	0	0	1	1	1	1	HMGL-like
DUF561	PF04481.12	gi|289596904|ref|YP_003483600.1|	-	0.02	14.1	0.1	0.26	10.4	0.1	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF561)
TGT	PF01702.18	gi|289596904|ref|YP_003483600.1|	-	0.021	14.0	0.1	0.088	12.0	0.0	1.9	2	0	0	2	2	2	0	Queuine	tRNA-ribosyltransferase
DUF1614	PF07758.11	gi|289596905|ref|YP_003483601.1|	-	4.6e-58	196.0	13.4	6e-58	195.6	13.4	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1614)
PmbA_TldD	PF01523.16	gi|289596906|ref|YP_003483602.1|	-	1.1e-42	146.8	1.5	1.5e-42	146.4	1.5	1.1	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
HEPN-like_int	PF18867.1	gi|289596906|ref|YP_003483602.1|	-	0.037	13.9	0.1	0.094	12.6	0.1	1.7	1	0	0	1	1	1	0	HEPN-like	integron	domain
PmbA_TldD	PF01523.16	gi|289596907|ref|YP_003483603.1|	-	2.1e-52	178.7	0.4	2.9e-52	178.3	0.4	1.2	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
Spore_coat_CotO	PF14153.6	gi|289596907|ref|YP_003483603.1|	-	0.02	14.9	0.0	0.032	14.2	0.0	1.4	1	0	0	1	1	1	0	Spore	coat	protein	CotO
DUF4279	PF14106.6	gi|289596907|ref|YP_003483603.1|	-	0.045	14.0	0.1	0.12	12.6	0.1	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4279)
CBS	PF00571.28	gi|289596908|ref|YP_003483604.1|	-	6.6e-52	173.8	16.4	9.5e-15	54.8	0.5	4.4	4	0	0	4	4	4	4	CBS	domain
Ribosomal_S30AE	PF02482.19	gi|289596908|ref|YP_003483604.1|	-	3.7e-06	27.6	1.0	1e-05	26.2	0.3	2.2	3	0	0	3	3	3	1	Sigma	54	modulation	protein	/	S30EA	ribosomal	protein
Acetyltransf_10	PF13673.7	gi|289596908|ref|YP_003483604.1|	-	0.12	12.4	0.0	69	3.4	0.0	3.5	4	0	0	4	4	4	0	Acetyltransferase	(GNAT)	domain
GAF_2	PF13185.6	gi|289596908|ref|YP_003483604.1|	-	0.13	12.6	0.0	4	7.7	0.0	3.0	4	0	0	4	4	4	0	GAF	domain
Tubulin	PF00091.25	gi|289596909|ref|YP_003483605.1|	-	2.9e-35	122.3	3.0	9.3e-35	120.6	3.0	1.8	1	1	0	1	1	1	1	Tubulin/FtsZ	family,	GTPase	domain
FtsZ_C	PF12327.8	gi|289596909|ref|YP_003483605.1|	-	7.4e-21	74.3	0.0	1.8e-20	73.0	0.0	1.7	1	0	0	1	1	1	1	FtsZ	family,	C-terminal	domain
Fe-ADH_2	PF13685.6	gi|289596909|ref|YP_003483605.1|	-	0.036	13.8	0.1	0.077	12.7	0.1	1.5	1	0	0	1	1	1	0	Iron-containing	alcohol	dehydrogenase
Ribosomal_L7Ae	PF01248.26	gi|289596910|ref|YP_003483606.1|	-	2.3e-25	88.2	0.1	2.8e-25	87.9	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
RNase_P_pop3	PF08228.11	gi|289596910|ref|YP_003483606.1|	-	0.0019	18.3	0.0	0.0024	18.0	0.0	1.1	1	0	0	1	1	1	1	RNase	P	subunit	Pop3
PELOTA_1	PF15608.6	gi|289596910|ref|YP_003483606.1|	-	0.014	15.3	0.0	0.02	14.8	0.0	1.3	1	0	0	1	1	1	0	PELOTA	RNA	binding	domain
Cas9_Topo	PF17894.1	gi|289596910|ref|YP_003483606.1|	-	0.12	12.4	0.0	0.22	11.6	0.0	1.3	1	0	0	1	1	1	0	Topo	homolgy	domain	in	CRISPR-associated	endonuclease	Cas9
Ribosomal_S28e	PF01200.18	gi|289596911|ref|YP_003483607.1|	-	5.2e-33	112.9	4.2	5.7e-33	112.7	4.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S28e
KOW	PF00467.29	gi|289596911|ref|YP_003483607.1|	-	0.1	12.6	2.4	0.45	10.5	0.1	2.6	1	1	1	2	2	2	0	KOW	motif
Ribosomal_L24e	PF01246.20	gi|289596912|ref|YP_003483608.1|	-	2.4e-22	78.9	1.9	3.2e-22	78.5	1.9	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L24e
YHS	PF04945.13	gi|289596912|ref|YP_003483608.1|	-	3.7e-06	26.9	3.1	5.5e-06	26.4	3.1	1.3	1	0	0	1	1	1	1	YHS	domain
zf-FCS	PF06467.14	gi|289596912|ref|YP_003483608.1|	-	5.1e-05	23.1	3.2	7.7e-05	22.6	3.2	1.3	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
zf-FLZ	PF04570.14	gi|289596912|ref|YP_003483608.1|	-	0.0034	16.8	0.9	0.0064	15.9	0.9	1.4	1	0	0	1	1	1	1	zinc-finger	of	the	FCS-type,	C2-C2
Arc_trans_TRASH	PF08394.10	gi|289596912|ref|YP_003483608.1|	-	0.0065	16.8	3.4	0.013	15.9	3.4	1.5	1	1	0	1	1	1	1	Archaeal	TRASH	domain
zf-C6H2	PF15801.5	gi|289596912|ref|YP_003483608.1|	-	0.0072	16.6	0.7	0.016	15.5	0.0	1.8	2	0	0	2	2	2	1	zf-MYND-like	zinc	finger,	mRNA-binding
DUF3268	PF11672.8	gi|289596912|ref|YP_003483608.1|	-	0.059	13.7	0.9	0.066	13.5	0.9	1.1	1	0	0	1	1	1	0	zinc-finger-containing	domain
DUF2175	PF09943.9	gi|289596912|ref|YP_003483608.1|	-	0.12	12.7	1.8	0.14	12.5	1.8	1.3	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2175)
VATC	PF18716.1	gi|289596912|ref|YP_003483608.1|	-	0.28	11.1	5.2	0.64	9.9	5.2	1.6	1	1	0	1	1	1	0	Vms1-associating	treble	clef	domain
zf-HIT	PF04438.16	gi|289596912|ref|YP_003483608.1|	-	1.9	8.4	8.9	1e+02	2.9	8.9	2.2	1	1	0	1	1	1	0	HIT	zinc	finger
NDK	PF00334.19	gi|289596913|ref|YP_003483609.1|	-	6.5e-61	204.3	0.0	7.3e-61	204.1	0.0	1.0	1	0	0	1	1	1	1	Nucleoside	diphosphate	kinase
TruD	PF01142.18	gi|289596914|ref|YP_003483610.1|	-	1.8e-133	445.4	0.4	2e-133	445.2	0.4	1.0	1	0	0	1	1	1	1	tRNA	pseudouridine	synthase	D	(TruD)
ECF-ribofla_trS	PF07155.12	gi|289596915|ref|YP_003483611.1|	-	5.4e-11	42.8	13.6	1.1e-10	41.8	13.6	1.5	1	0	0	1	1	1	1	ECF-type	riboflavin	transporter,	S	component
ECF_trnsprt	PF12822.7	gi|289596915|ref|YP_003483611.1|	-	2.2e-10	40.9	18.6	2.2e-10	40.9	18.6	2.1	2	0	0	2	2	2	1	ECF	transporter,	substrate-specific	component
ABC_tran	PF00005.27	gi|289596916|ref|YP_003483612.1|	-	4.2e-60	202.2	0.1	8.7e-29	100.8	0.0	2.5	2	0	0	2	2	2	2	ABC	transporter
AAA_21	PF13304.6	gi|289596916|ref|YP_003483612.1|	-	1e-19	71.5	10.3	8.6e-05	22.5	0.2	4.2	2	2	1	4	4	4	4	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|289596916|ref|YP_003483612.1|	-	3.4e-18	65.9	1.7	8.8e-09	35.1	0.0	3.4	2	2	1	3	3	3	3	RecF/RecN/SMC	N	terminal	domain
AAA_22	PF13401.6	gi|289596916|ref|YP_003483612.1|	-	8.3e-10	39.1	0.3	0.0036	17.6	0.0	3.0	2	1	0	2	2	2	2	AAA	domain
AAA_23	PF13476.6	gi|289596916|ref|YP_003483612.1|	-	2.4e-08	34.7	3.1	0.0024	18.4	0.3	2.6	1	1	0	2	2	2	2	AAA	domain
AAA_29	PF13555.6	gi|289596916|ref|YP_003483612.1|	-	9.1e-08	31.7	0.2	0.00062	19.5	0.0	2.3	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.6	gi|289596916|ref|YP_003483612.1|	-	1.1e-06	28.6	1.4	0.023	14.4	0.1	2.9	2	1	1	3	3	3	2	AAA	ATPase	domain
NB-ARC	PF00931.22	gi|289596916|ref|YP_003483612.1|	-	1.4e-06	27.7	0.1	0.019	14.2	0.1	2.3	2	0	0	2	2	2	2	NB-ARC	domain
AAA_16	PF13191.6	gi|289596916|ref|YP_003483612.1|	-	4.5e-06	27.1	0.1	0.0012	19.2	0.0	2.6	2	1	0	2	2	2	1	AAA	ATPase	domain
NACHT	PF05729.12	gi|289596916|ref|YP_003483612.1|	-	5.5e-06	26.4	0.1	0.044	13.7	0.0	2.3	2	0	0	2	2	2	2	NACHT	domain
RsgA_GTPase	PF03193.16	gi|289596916|ref|YP_003483612.1|	-	5.7e-06	26.3	0.2	0.12	12.3	0.0	2.6	2	0	0	2	2	2	2	RsgA	GTPase
MobB	PF03205.14	gi|289596916|ref|YP_003483612.1|	-	8.7e-06	25.7	0.3	0.051	13.5	0.2	2.6	2	0	0	2	2	2	2	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_18	PF13238.6	gi|289596916|ref|YP_003483612.1|	-	1.6e-05	25.4	0.3	0.28	11.7	0.2	2.7	2	1	0	2	2	2	2	AAA	domain
T2SSE	PF00437.20	gi|289596916|ref|YP_003483612.1|	-	2.3e-05	23.6	0.3	0.038	13.0	0.0	2.9	4	0	0	4	4	3	2	Type	II/IV	secretion	system	protein
SbcCD_C	PF13558.6	gi|289596916|ref|YP_003483612.1|	-	3.2e-05	24.1	0.2	0.11	12.7	0.1	3.5	2	2	0	2	2	2	1	Putative	exonuclease	SbcCD,	C	subunit
Mg_chelatase	PF01078.21	gi|289596916|ref|YP_003483612.1|	-	4.5e-05	22.9	0.0	0.22	10.9	0.0	2.6	3	0	0	3	3	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_30	PF13604.6	gi|289596916|ref|YP_003483612.1|	-	4.6e-05	23.2	0.0	0.08	12.7	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
AAA_33	PF13671.6	gi|289596916|ref|YP_003483612.1|	-	6.7e-05	23.1	1.5	0.037	14.2	0.1	2.6	2	0	0	2	2	2	1	AAA	domain
AAA	PF00004.29	gi|289596916|ref|YP_003483612.1|	-	0.00013	22.4	1.7	0.45	10.9	0.0	3.1	2	1	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_24	PF13479.6	gi|289596916|ref|YP_003483612.1|	-	0.00014	21.6	0.2	0.12	12.1	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
TsaE	PF02367.17	gi|289596916|ref|YP_003483612.1|	-	0.00054	20.0	0.1	0.97	9.4	0.0	2.4	2	0	0	2	2	2	2	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
ATPase_2	PF01637.18	gi|289596916|ref|YP_003483612.1|	-	0.00066	19.7	0.7	0.46	10.3	0.0	2.7	2	1	0	2	2	2	1	ATPase	domain	predominantly	from	Archaea
G-alpha	PF00503.20	gi|289596916|ref|YP_003483612.1|	-	0.00088	18.5	0.0	0.0077	15.4	0.0	2.0	2	0	0	2	2	2	1	G-protein	alpha	subunit
AAA_27	PF13514.6	gi|289596916|ref|YP_003483612.1|	-	0.00097	18.8	0.0	0.4	10.2	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
AAA_25	PF13481.6	gi|289596916|ref|YP_003483612.1|	-	0.001	18.7	0.1	0.065	12.8	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
Rad17	PF03215.15	gi|289596916|ref|YP_003483612.1|	-	0.0014	18.6	0.1	2.6	7.9	0.0	3.2	3	0	0	3	3	3	1	Rad17	P-loop	domain
PduV-EutP	PF10662.9	gi|289596916|ref|YP_003483612.1|	-	0.0028	17.4	0.1	2.1	8.1	0.0	2.6	2	0	0	2	2	2	1	Ethanolamine	utilisation	-	propanediol	utilisation
RNA_helicase	PF00910.22	gi|289596916|ref|YP_003483612.1|	-	0.003	17.9	0.1	3.6	8.0	0.0	2.6	2	0	0	2	2	2	0	RNA	helicase
PRK	PF00485.18	gi|289596916|ref|YP_003483612.1|	-	0.003	17.3	0.1	2.2	8.0	0.0	2.3	2	0	0	2	2	2	1	Phosphoribulokinase	/	Uridine	kinase	family
MMR_HSR1	PF01926.23	gi|289596916|ref|YP_003483612.1|	-	0.004	17.2	1.5	1.2	9.2	0.1	2.5	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
FtsK_SpoIIIE	PF01580.18	gi|289596916|ref|YP_003483612.1|	-	0.0043	16.4	0.1	0.088	12.1	0.0	2.3	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
AAA_13	PF13166.6	gi|289596916|ref|YP_003483612.1|	-	0.0045	15.7	2.2	0.059	12.0	0.0	2.8	2	1	1	3	3	3	1	AAA	domain
cobW	PF02492.19	gi|289596916|ref|YP_003483612.1|	-	0.0051	16.4	1.6	0.84	9.2	0.1	2.6	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_5	PF07728.14	gi|289596916|ref|YP_003483612.1|	-	0.006	16.6	1.5	0.78	9.7	0.0	3.1	3	0	0	3	3	2	1	AAA	domain	(dynein-related	subfamily)
PhoH	PF02562.16	gi|289596916|ref|YP_003483612.1|	-	0.0061	16.0	0.1	2.2	7.7	0.0	2.3	2	0	0	2	2	2	1	PhoH-like	protein
ATP_bind_1	PF03029.17	gi|289596916|ref|YP_003483612.1|	-	0.0065	16.3	0.5	0.24	11.1	0.0	2.5	2	0	0	2	2	2	1	Conserved	hypothetical	ATP	binding	protein
DEAD	PF00270.29	gi|289596916|ref|YP_003483612.1|	-	0.0096	15.7	0.0	3.8	7.3	0.0	2.4	2	1	0	2	2	2	0	DEAD/DEAH	box	helicase
Pox_A32	PF04665.12	gi|289596916|ref|YP_003483612.1|	-	0.01	15.3	0.1	0.19	11.2	0.0	2.3	2	0	0	2	2	2	0	Poxvirus	A32	protein
SRP54	PF00448.22	gi|289596916|ref|YP_003483612.1|	-	0.012	15.3	1.1	4.5	6.8	0.2	2.4	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
IstB_IS21	PF01695.17	gi|289596916|ref|YP_003483612.1|	-	0.012	15.3	0.4	3.4	7.3	0.0	3.3	4	0	0	4	4	3	0	IstB-like	ATP	binding	protein
AAA_7	PF12775.7	gi|289596916|ref|YP_003483612.1|	-	0.013	15.1	0.1	0.48	9.9	0.0	2.2	2	0	0	2	2	2	0	P-loop	containing	dynein	motor	region
ATPase	PF06745.13	gi|289596916|ref|YP_003483612.1|	-	0.013	14.9	0.3	1.6	8.0	0.0	2.4	2	0	0	2	2	2	0	KaiC
AAA_14	PF13173.6	gi|289596916|ref|YP_003483612.1|	-	0.015	15.4	1.8	5.9	6.9	0.1	3.3	3	1	0	3	3	2	0	AAA	domain
ABC_ATPase	PF09818.9	gi|289596916|ref|YP_003483612.1|	-	0.017	13.9	0.8	14	4.3	0.0	3.3	3	0	0	3	3	3	0	Predicted	ATPase	of	the	ABC	class
NTPase_1	PF03266.15	gi|289596916|ref|YP_003483612.1|	-	0.018	15.0	1.8	3.3	7.6	0.1	2.4	2	0	0	2	2	2	0	NTPase
Zeta_toxin	PF06414.12	gi|289596916|ref|YP_003483612.1|	-	0.025	13.8	0.1	7.6	5.8	0.1	2.4	2	0	0	2	2	2	0	Zeta	toxin
Septin	PF00735.18	gi|289596916|ref|YP_003483612.1|	-	0.028	13.7	0.3	0.97	8.7	0.0	2.2	2	0	0	2	2	2	0	Septin
AAA_19	PF13245.6	gi|289596916|ref|YP_003483612.1|	-	0.035	14.5	0.3	1.8	8.9	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
Sigma54_activat	PF00158.26	gi|289596916|ref|YP_003483612.1|	-	0.037	13.7	0.1	4.7	6.9	0.0	2.6	2	0	0	2	2	2	0	Sigma-54	interaction	domain
DLIC	PF05783.11	gi|289596916|ref|YP_003483612.1|	-	0.063	12.1	0.2	6.1	5.5	0.0	2.1	2	0	0	2	2	2	0	Dynein	light	intermediate	chain	(DLIC)
Roc	PF08477.13	gi|289596916|ref|YP_003483612.1|	-	0.078	13.2	1.0	12	6.2	0.0	2.7	2	0	0	2	2	2	0	Ras	of	Complex,	Roc,	domain	of	DAPkinase
DUF3584	PF12128.8	gi|289596916|ref|YP_003483612.1|	-	0.091	10.3	1.7	3.8	4.9	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3584)
DUF87	PF01935.17	gi|289596916|ref|YP_003483612.1|	-	0.15	12.2	4.4	4.1	7.4	0.1	3.3	4	0	0	4	4	4	0	Helicase	HerA,	central	domain
AAA_11	PF13086.6	gi|289596916|ref|YP_003483612.1|	-	0.19	11.5	0.0	0.94	9.2	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
AAA_28	PF13521.6	gi|289596916|ref|YP_003483612.1|	-	0.26	11.5	1.2	11	6.2	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
AAA_17	PF13207.6	gi|289596916|ref|YP_003483612.1|	-	1.2	9.6	3.5	20	5.6	0.1	3.1	2	1	1	3	3	2	0	AAA	domain
CbiQ	PF02361.16	gi|289596917|ref|YP_003483613.1|	-	4.8e-21	75.4	14.1	4.8e-21	75.4	14.1	2.3	1	1	1	2	2	2	1	Cobalt	transport	protein
DUF423	PF04241.15	gi|289596917|ref|YP_003483613.1|	-	3.8	7.8	5.6	1.3	9.2	1.6	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF423)
DUF4430	PF14478.6	gi|289596918|ref|YP_003483614.1|	-	3.3e-15	56.4	2.9	3.6e-15	56.3	0.3	2.3	2	1	0	2	2	2	1	Domain	of	unknown	function	(DUF4430)
LAGLIDADG_3	PF14528.6	gi|289596918|ref|YP_003483614.1|	-	0.12	12.8	0.3	0.21	11.9	0.3	1.4	1	0	0	1	1	1	0	LAGLIDADG-like	domain
DNA_primase_S	PF01896.19	gi|289596919|ref|YP_003483615.1|	-	3.7e-22	79.2	0.1	7.7e-22	78.2	0.1	1.6	1	0	0	1	1	1	1	DNA	primase	small	subunit
FANCF	PF11107.8	gi|289596919|ref|YP_003483615.1|	-	0.092	11.9	0.3	0.14	11.3	0.3	1.1	1	0	0	1	1	1	0	Fanconi	anemia	group	F	protein	(FANCF)
Ribosomal_S17e	PF00833.18	gi|289596920|ref|YP_003483616.1|	-	6.7e-15	55.1	0.1	7.6e-15	54.9	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	S17
TYW3	PF02676.14	gi|289596921|ref|YP_003483617.1|	-	7.7e-40	136.5	0.3	9.9e-40	136.2	0.3	1.1	1	0	0	1	1	1	1	Methyltransferase	TYW3
tRNA_anti-codon	PF01336.25	gi|289596922|ref|YP_003483618.1|	-	6.9e-10	38.8	0.3	1.4e-09	37.8	0.2	1.6	1	1	1	2	2	2	1	OB-fold	nucleic	acid	binding	domain
DUF3979	PF13141.6	gi|289596922|ref|YP_003483618.1|	-	0.0033	17.7	0.4	0.0048	17.1	0.4	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3979)
RecG_wedge	PF17191.4	gi|289596922|ref|YP_003483618.1|	-	0.016	14.8	0.1	0.021	14.5	0.1	1.2	1	0	0	1	1	1	0	RecG	wedge	domain
HlyD_3	PF13437.6	gi|289596922|ref|YP_003483618.1|	-	0.096	13.4	0.0	0.13	13.0	0.0	1.3	1	0	0	1	1	1	0	HlyD	family	secretion	protein
CDC24_OB3	PF17244.2	gi|289596922|ref|YP_003483618.1|	-	0.22	11.2	0.1	0.31	10.7	0.1	1.2	1	0	0	1	1	1	0	Cell	division	control	protein	24,	OB	domain	3
Methyltransf_31	PF13847.6	gi|289596923|ref|YP_003483619.1|	-	3.5e-10	39.9	0.0	6.7e-10	39.0	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.10	gi|289596923|ref|YP_003483619.1|	-	7.2e-10	38.7	0.0	1.5e-09	37.6	0.0	1.5	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_25	PF13649.6	gi|289596923|ref|YP_003483619.1|	-	1.1e-09	38.9	0.0	2.3e-09	37.9	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|289596923|ref|YP_003483619.1|	-	9.8e-08	31.7	0.0	1.7e-07	31.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_11	PF08241.12	gi|289596923|ref|YP_003483619.1|	-	7.9e-06	26.4	0.0	1.7e-05	25.4	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
DUF43	PF01861.16	gi|289596923|ref|YP_003483619.1|	-	6.3e-05	22.3	0.0	0.00013	21.2	0.0	1.5	1	0	0	1	1	1	1	Branched-chain	polyamine	synthase	A	C-terminal	domain
Methyltransf_4	PF02390.17	gi|289596923|ref|YP_003483619.1|	-	0.00018	21.0	0.0	0.00057	19.4	0.0	1.8	2	0	0	2	2	2	1	Putative	methyltransferase
UPF0020	PF01170.18	gi|289596923|ref|YP_003483619.1|	-	0.0005	19.8	0.0	0.001	18.8	0.0	1.5	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
tRNA_U5-meth_tr	PF05958.11	gi|289596923|ref|YP_003483619.1|	-	0.0015	17.6	0.0	0.0026	16.8	0.0	1.4	1	0	0	1	1	1	1	tRNA	(Uracil-5-)-methyltransferase
PrmA	PF06325.13	gi|289596923|ref|YP_003483619.1|	-	0.0015	18.0	0.0	0.0023	17.4	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Cons_hypoth95	PF03602.15	gi|289596923|ref|YP_003483619.1|	-	0.0016	18.1	0.0	0.0031	17.2	0.0	1.5	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
PCMT	PF01135.19	gi|289596923|ref|YP_003483619.1|	-	0.003	17.3	0.0	0.0051	16.6	0.0	1.3	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
GidB	PF02527.15	gi|289596923|ref|YP_003483619.1|	-	0.0033	16.8	0.0	0.0069	15.7	0.0	1.5	1	0	0	1	1	1	1	rRNA	small	subunit	methyltransferase	G
Methyltransf_18	PF12847.7	gi|289596923|ref|YP_003483619.1|	-	0.0037	17.2	0.0	0.0076	16.2	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|289596923|ref|YP_003483619.1|	-	0.0055	17.4	0.2	0.015	16.1	0.0	1.8	2	0	0	2	2	1	1	Methyltransferase	domain
Methyltransf_32	PF13679.6	gi|289596923|ref|YP_003483619.1|	-	0.0064	16.5	0.0	0.011	15.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
TehB	PF03848.14	gi|289596923|ref|YP_003483619.1|	-	0.0071	15.8	0.1	0.013	14.9	0.1	1.3	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
Ubie_methyltran	PF01209.18	gi|289596923|ref|YP_003483619.1|	-	0.014	14.7	0.0	0.028	13.8	0.0	1.4	1	0	0	1	1	1	0	ubiE/COQ5	methyltransferase	family
DUF2856	PF11043.8	gi|289596923|ref|YP_003483619.1|	-	0.043	13.9	0.1	0.13	12.4	0.1	1.9	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2856)
Methyltransf_24	PF13578.6	gi|289596923|ref|YP_003483619.1|	-	0.07	14.2	0.0	0.17	12.9	0.0	1.6	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltr_RsmB-F	PF01189.17	gi|289596923|ref|YP_003483619.1|	-	0.12	12.0	0.0	0.22	11.1	0.0	1.4	1	0	0	1	1	1	0	16S	rRNA	methyltransferase	RsmB/F
UDPG_MGDP_dh_N	PF03721.14	gi|289596923|ref|YP_003483619.1|	-	0.14	11.8	0.0	0.24	11.0	0.0	1.3	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
DUF2207	PF09972.9	gi|289596924|ref|YP_003483620.1|	-	0.026	13.3	1.2	0.031	13.0	1.2	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
YcxB	PF14317.6	gi|289596924|ref|YP_003483620.1|	-	0.16	11.7	4.3	0.18	11.6	0.5	2.5	2	1	0	2	2	2	0	YcxB-like	protein
ABC_tran	PF00005.27	gi|289596925|ref|YP_003483621.1|	-	4.7e-30	104.9	0.0	1.4e-29	103.4	0.0	1.7	1	1	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.12	gi|289596925|ref|YP_003483621.1|	-	1.5e-19	70.3	0.5	3.5e-19	69.1	0.2	1.8	2	0	0	2	2	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.6	gi|289596925|ref|YP_003483621.1|	-	2.4e-10	40.7	2.2	5e-07	29.8	0.9	2.2	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|289596925|ref|YP_003483621.1|	-	1.2e-05	24.8	0.2	8.1e-05	22.1	0.2	1.9	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_16	PF13191.6	gi|289596925|ref|YP_003483621.1|	-	5.2e-05	23.7	0.0	8.3e-05	23.0	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.6	gi|289596925|ref|YP_003483621.1|	-	7e-05	23.1	1.0	0.0031	17.8	1.0	2.2	1	1	0	1	1	1	1	AAA	domain
ATP-synt_ab	PF00006.25	gi|289596925|ref|YP_003483621.1|	-	0.0005	19.8	0.0	0.00064	19.4	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_15	PF13175.6	gi|289596925|ref|YP_003483621.1|	-	0.0014	18.4	0.1	0.0094	15.7	0.1	1.9	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA	PF00004.29	gi|289596925|ref|YP_003483621.1|	-	0.0029	18.0	0.1	0.24	11.8	0.0	2.2	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
TniB	PF05621.11	gi|289596925|ref|YP_003483621.1|	-	0.0037	16.7	0.1	0.39	10.1	0.0	2.4	2	0	0	2	2	2	1	Bacterial	TniB	protein
NACHT	PF05729.12	gi|289596925|ref|YP_003483621.1|	-	0.02	14.8	0.2	0.045	13.7	0.0	1.7	2	0	0	2	2	1	0	NACHT	domain
Sigma54_activat	PF00158.26	gi|289596925|ref|YP_003483621.1|	-	0.021	14.5	0.0	0.94	9.2	0.0	2.2	2	0	0	2	2	2	0	Sigma-54	interaction	domain
NB-ARC	PF00931.22	gi|289596925|ref|YP_003483621.1|	-	0.023	13.9	0.0	0.046	12.9	0.0	1.5	1	0	0	1	1	1	0	NB-ARC	domain
ATPase_2	PF01637.18	gi|289596925|ref|YP_003483621.1|	-	0.03	14.3	0.7	0.063	13.2	0.7	1.7	1	1	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
ATPase	PF06745.13	gi|289596925|ref|YP_003483621.1|	-	0.035	13.4	0.1	0.34	10.2	0.0	2.1	2	0	0	2	2	2	0	KaiC
AAA_5	PF07728.14	gi|289596925|ref|YP_003483621.1|	-	0.048	13.7	0.0	0.31	11.0	0.0	2.1	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
PRK	PF00485.18	gi|289596925|ref|YP_003483621.1|	-	0.061	13.1	0.1	0.14	11.8	0.0	1.7	2	0	0	2	2	2	0	Phosphoribulokinase	/	Uridine	kinase	family
Rad17	PF03215.15	gi|289596925|ref|YP_003483621.1|	-	0.078	12.9	0.0	0.13	12.2	0.0	1.3	1	0	0	1	1	1	0	Rad17	P-loop	domain
MobB	PF03205.14	gi|289596925|ref|YP_003483621.1|	-	0.094	12.6	0.1	0.18	11.7	0.1	1.4	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_29	PF13555.6	gi|289596925|ref|YP_003483621.1|	-	0.13	12.0	0.1	0.24	11.1	0.1	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
SbcCD_C	PF13558.6	gi|289596925|ref|YP_003483621.1|	-	0.22	11.8	0.0	0.81	10.0	0.0	1.9	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_30	PF13604.6	gi|289596925|ref|YP_003483621.1|	-	0.22	11.2	0.0	0.89	9.2	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
AAA_13	PF13166.6	gi|289596925|ref|YP_003483621.1|	-	7.6	5.0	7.5	1.4	7.4	0.2	2.8	1	1	1	4	4	4	0	AAA	domain
AAA_23	PF13476.6	gi|289596925|ref|YP_003483621.1|	-	8.7	6.8	9.2	0.64	10.5	0.2	2.3	1	1	1	2	2	2	0	AAA	domain
ABC_tran	PF00005.27	gi|289596926|ref|YP_003483622.1|	-	1.6e-28	100.0	0.0	2.1e-28	99.5	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.12	gi|289596926|ref|YP_003483622.1|	-	8.4e-21	74.3	0.2	2e-20	73.1	0.2	1.7	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.6	gi|289596926|ref|YP_003483622.1|	-	8e-07	29.2	1.2	1.7e-06	28.1	0.1	1.8	1	1	0	2	2	2	1	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|289596926|ref|YP_003483622.1|	-	0.0037	16.7	0.8	0.015	14.7	0.8	1.9	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
TniB	PF05621.11	gi|289596926|ref|YP_003483622.1|	-	0.013	14.9	0.4	0.038	13.4	0.1	1.9	2	0	0	2	2	2	0	Bacterial	TniB	protein
AAA_22	PF13401.6	gi|289596926|ref|YP_003483622.1|	-	0.033	14.4	0.7	2.5	8.4	0.1	2.3	2	0	0	2	2	2	0	AAA	domain
NB-ARC	PF00931.22	gi|289596926|ref|YP_003483622.1|	-	0.055	12.6	0.3	5.6	6.1	0.0	2.2	2	0	0	2	2	2	0	NB-ARC	domain
BPD_transp_1	PF00528.22	gi|289596927|ref|YP_003483623.1|	-	1.4e-36	126.0	11.4	1.4e-36	126.0	11.4	2.2	2	1	1	3	3	3	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.7	gi|289596927|ref|YP_003483623.1|	-	2.1e-10	40.4	0.6	2.1e-10	40.4	0.6	4.1	4	0	0	4	4	4	1	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
E1-E2_ATPase	PF00122.20	gi|289596927|ref|YP_003483623.1|	-	1.5	8.3	5.5	9.9	5.6	2.4	2.4	2	0	0	2	2	2	0	E1-E2	ATPase
Herpes_US9	PF06072.11	gi|289596927|ref|YP_003483623.1|	-	4.3	7.3	5.0	12	5.8	1.4	2.5	2	0	0	2	2	2	0	Alphaherpesvirus	tegument	protein	US9
BPD_transp_1	PF00528.22	gi|289596928|ref|YP_003483624.1|	-	7.4e-44	149.7	15.0	7.4e-44	149.7	15.0	1.6	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
Renin_r	PF07850.14	gi|289596928|ref|YP_003483624.1|	-	1.6	9.4	13.8	0.16	12.6	1.4	3.5	4	0	0	4	4	4	0	Renin	receptor-like	protein
SBP_bac_5	PF00496.22	gi|289596929|ref|YP_003483625.1|	-	5.2e-92	308.7	7.1	6.9e-92	308.3	7.1	1.2	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
SasG_E	PF17041.5	gi|289596929|ref|YP_003483625.1|	-	0.019	15.0	2.1	0.92	9.6	0.0	2.5	2	0	0	2	2	2	0	E	domain
DUF2568	PF10823.8	gi|289596929|ref|YP_003483625.1|	-	0.036	14.3	1.3	0.072	13.4	1.3	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2568)
TRCF	PF03461.15	gi|289596929|ref|YP_003483625.1|	-	0.055	13.8	0.1	0.11	12.9	0.1	1.4	1	0	0	1	1	1	0	TRCF	domain
Ribosomal_L18A	PF01775.17	gi|289596931|ref|YP_003483627.1|	-	2.4e-06	27.7	0.1	3.1e-06	27.3	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	proteins	50S-L18Ae/60S-L20/60S-L18A
Prefoldin	PF02996.17	gi|289596932|ref|YP_003483628.1|	-	2.2e-17	63.1	8.1	2.9e-17	62.7	8.1	1.2	1	0	0	1	1	1	1	Prefoldin	subunit
Prefoldin_2	PF01920.20	gi|289596932|ref|YP_003483628.1|	-	0.00021	21.2	9.9	0.0026	17.7	0.5	2.5	2	0	0	2	2	2	1	Prefoldin	subunit
DUF4407	PF14362.6	gi|289596932|ref|YP_003483628.1|	-	0.0023	17.3	5.2	0.0078	15.6	5.2	1.7	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4407)
LPP	PF04728.13	gi|289596932|ref|YP_003483628.1|	-	0.01	16.2	3.1	0.26	11.7	0.3	2.5	2	1	0	2	2	2	0	Lipoprotein	leucine-zipper
DUF4618	PF15397.6	gi|289596932|ref|YP_003483628.1|	-	0.02	14.3	6.0	0.87	9.0	0.2	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4618)
KxDL	PF10241.9	gi|289596932|ref|YP_003483628.1|	-	0.024	14.9	4.2	0.81	10.0	0.4	2.4	2	0	0	2	2	2	0	Uncharacterized	conserved	protein
TolA_bind_tri	PF16331.5	gi|289596932|ref|YP_003483628.1|	-	0.024	14.7	4.8	0.88	9.7	0.9	2.3	2	0	0	2	2	2	0	TolA	binding	protein	trimerisation
Baculo_PEP_C	PF04513.12	gi|289596932|ref|YP_003483628.1|	-	0.029	14.4	3.2	0.72	9.9	0.4	2.1	2	0	0	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
FlxA	PF14282.6	gi|289596932|ref|YP_003483628.1|	-	0.032	14.2	2.2	0.032	14.2	2.2	2.2	2	1	0	2	2	2	0	FlxA-like	protein
dNK	PF01712.19	gi|289596932|ref|YP_003483628.1|	-	0.033	14.0	0.6	0.047	13.6	0.6	1.3	1	0	0	1	1	1	0	Deoxynucleoside	kinase
Occludin_ELL	PF07303.13	gi|289596932|ref|YP_003483628.1|	-	0.039	14.7	5.6	0.92	10.3	0.2	2.2	2	0	0	2	2	2	0	Occludin	homology	domain
DUF4763	PF15960.5	gi|289596932|ref|YP_003483628.1|	-	0.043	13.1	6.6	1.2	8.4	1.2	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4763)
COG5	PF10392.9	gi|289596932|ref|YP_003483628.1|	-	0.073	13.2	5.1	1.7	8.8	1.1	2.1	2	0	0	2	2	2	0	Golgi	transport	complex	subunit	5
DivIC	PF04977.15	gi|289596932|ref|YP_003483628.1|	-	0.09	12.6	0.7	0.09	12.6	0.7	2.8	2	1	0	2	2	2	0	Septum	formation	initiator
DUF3138	PF11336.8	gi|289596932|ref|YP_003483628.1|	-	0.099	11.2	0.1	0.099	11.2	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3138)
NPV_P10	PF05531.12	gi|289596932|ref|YP_003483628.1|	-	0.11	13.0	5.9	0.51	10.8	0.6	2.5	1	1	1	2	2	2	0	Nucleopolyhedrovirus	P10	protein
Tho2	PF11262.8	gi|289596932|ref|YP_003483628.1|	-	0.11	11.7	6.2	2	7.6	1.8	2.0	1	1	0	2	2	2	0	Transcription	factor/nuclear	export	subunit	protein	2
Cep57_CLD_2	PF14197.6	gi|289596932|ref|YP_003483628.1|	-	0.11	12.6	4.9	0.27	11.4	0.1	2.6	2	1	0	2	2	2	0	Centrosome	localisation	domain	of	PPC89
BRE1	PF08647.11	gi|289596932|ref|YP_003483628.1|	-	0.19	11.8	15.1	0.058	13.5	5.5	2.2	2	0	0	2	2	2	0	BRE1	E3	ubiquitin	ligase
DUF5082	PF16888.5	gi|289596932|ref|YP_003483628.1|	-	0.19	12.0	7.9	0.35	11.2	0.7	2.3	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF5082)
CdvA	PF18822.1	gi|289596932|ref|YP_003483628.1|	-	0.22	11.3	12.0	0.36	10.7	5.0	2.4	2	0	0	2	2	2	0	CdvA-like	coiled-coil	domain
DUF4201	PF13870.6	gi|289596932|ref|YP_003483628.1|	-	0.22	11.2	11.2	1.3	8.7	5.4	2.5	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4201)
Spc24	PF08286.11	gi|289596932|ref|YP_003483628.1|	-	0.23	11.7	6.6	1.5	9.1	0.2	2.2	2	0	0	2	2	2	0	Spc24	subunit	of	Ndc80
UPF0242	PF06785.11	gi|289596932|ref|YP_003483628.1|	-	0.23	11.6	11.5	0.72	9.9	2.7	2.0	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0242)	N-terminus
Uso1_p115_C	PF04871.13	gi|289596932|ref|YP_003483628.1|	-	0.23	11.8	9.1	2	8.8	3.0	2.2	2	0	0	2	2	2	0	Uso1	/	p115	like	vesicle	tethering	protein,	C	terminal	region
ABC_tran_CTD	PF16326.5	gi|289596932|ref|YP_003483628.1|	-	0.25	11.6	14.0	1.6	9.0	4.2	2.5	2	0	0	2	2	2	0	ABC	transporter	C-terminal	domain
Swi5	PF07061.11	gi|289596932|ref|YP_003483628.1|	-	0.31	11.1	0.3	0.31	11.1	0.3	2.4	2	1	0	2	2	2	0	Swi5
Phasin	PF05597.11	gi|289596932|ref|YP_003483628.1|	-	0.35	10.9	4.3	1.9	8.5	0.4	2.2	2	0	0	2	2	2	0	Poly(hydroxyalcanoate)	granule	associated	protein	(phasin)
CLZ	PF16526.5	gi|289596932|ref|YP_003483628.1|	-	0.45	10.9	9.0	2	8.8	1.6	2.3	2	0	0	2	2	2	0	C-terminal	leucine	zipper	domain	of	cyclic	nucleotide-gated	channels
GIT_CC	PF16559.5	gi|289596932|ref|YP_003483628.1|	-	0.47	10.4	5.8	2.6	8.0	0.6	2.4	2	0	0	2	2	2	0	GIT	coiled-coil	Rho	guanine	nucleotide	exchange	factor
Spc7	PF08317.11	gi|289596932|ref|YP_003483628.1|	-	0.48	9.2	13.3	0.33	9.8	2.5	2.1	2	0	0	2	2	2	0	Spc7	kinetochore	protein
DASH_Hsk3	PF08227.11	gi|289596932|ref|YP_003483628.1|	-	0.5	10.8	3.2	2	8.9	0.9	2.3	2	0	0	2	2	2	0	DASH	complex	subunit	Hsk3	like
DUF5344	PF17279.2	gi|289596932|ref|YP_003483628.1|	-	0.52	10.9	9.6	1.2	9.8	0.6	3.0	2	1	1	3	3	3	0	Family	of	unknown	function	(DUF5344)
3-PAP	PF12578.8	gi|289596932|ref|YP_003483628.1|	-	0.53	10.0	2.6	0.84	9.4	0.2	2.1	2	0	0	2	2	2	0	Myotubularin-associated	protein
DUF4140	PF13600.6	gi|289596932|ref|YP_003483628.1|	-	0.56	10.7	6.0	2.2	8.8	0.4	2.4	2	1	0	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
Cluap1	PF10234.9	gi|289596932|ref|YP_003483628.1|	-	0.56	9.5	11.2	0.27	10.6	3.4	2.1	2	0	0	2	2	2	0	Clusterin-associated	protein-1
Cas_DxTHG	PF09455.10	gi|289596932|ref|YP_003483628.1|	-	0.57	9.7	6.5	0.67	9.5	6.5	1.0	1	0	0	1	1	1	0	CRISPR-associated	(Cas)	DxTHG	family
ADIP	PF11559.8	gi|289596932|ref|YP_003483628.1|	-	0.69	10.0	10.9	0.38	10.8	1.9	2.1	2	0	0	2	2	2	0	Afadin-	and	alpha	-actinin-Binding
DUF4200	PF13863.6	gi|289596932|ref|YP_003483628.1|	-	0.72	10.3	12.5	2.2	8.7	1.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4200)
FlaC_arch	PF05377.11	gi|289596932|ref|YP_003483628.1|	-	0.89	10.0	9.1	0.37	11.2	1.6	2.6	2	1	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
BLOC1_2	PF10046.9	gi|289596932|ref|YP_003483628.1|	-	1	9.7	9.1	2.5	8.5	1.7	2.4	2	0	0	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
SlyX	PF04102.12	gi|289596932|ref|YP_003483628.1|	-	1	10.0	8.9	0.41	11.3	1.1	2.3	2	0	0	2	2	2	0	SlyX
Fib_alpha	PF08702.10	gi|289596932|ref|YP_003483628.1|	-	1.1	9.4	6.6	2.7	8.2	0.6	2.1	2	0	0	2	2	2	0	Fibrinogen	alpha/beta	chain	family
Snapin_Pallidin	PF14712.6	gi|289596932|ref|YP_003483628.1|	-	1.8	9.0	9.7	4.1	7.9	2.4	2.2	2	0	0	2	2	2	0	Snapin/Pallidin
FliD_N	PF02465.18	gi|289596932|ref|YP_003483628.1|	-	1.9	9.3	5.6	8.3	7.2	0.4	2.2	1	1	1	2	2	2	0	Flagellar	hook-associated	protein	2	N-terminus
DUF3450	PF11932.8	gi|289596932|ref|YP_003483628.1|	-	2	7.7	12.2	0.77	9.0	2.5	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3450)
Laminin_II	PF06009.12	gi|289596932|ref|YP_003483628.1|	-	2.9	7.9	7.7	7.8	6.5	0.8	2.4	3	0	0	3	3	2	0	Laminin	Domain	II
CENP-F_leu_zip	PF10473.9	gi|289596932|ref|YP_003483628.1|	-	3	7.9	14.8	0.55	10.3	3.6	2.2	2	0	0	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
CENP-Q	PF13094.6	gi|289596932|ref|YP_003483628.1|	-	3.5	7.8	12.3	0.6	10.3	0.7	2.1	1	1	0	2	2	2	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
ACCA	PF03255.14	gi|289596932|ref|YP_003483628.1|	-	6	6.7	7.8	7.7	6.4	1.4	2.1	2	0	0	2	2	2	0	Acetyl	co-enzyme	A	carboxylase	carboxyltransferase	alpha	subunit
GrpE	PF01025.19	gi|289596932|ref|YP_003483628.1|	-	7	6.3	10.8	2.6	7.7	1.4	2.1	2	0	0	2	2	2	0	GrpE
Tropomyosin_1	PF12718.7	gi|289596932|ref|YP_003483628.1|	-	7.5	6.7	15.2	6.1	7.0	2.5	2.2	2	0	0	2	2	2	0	Tropomyosin	like
DUF16	PF01519.16	gi|289596932|ref|YP_003483628.1|	-	10	6.7	10.6	27	5.3	6.4	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	DUF16
SRP54	PF00448.22	gi|289596933|ref|YP_003483629.1|	-	7e-78	260.8	1.1	1.2e-77	260.0	1.1	1.4	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SRP54_N	PF02881.19	gi|289596933|ref|YP_003483629.1|	-	4e-14	52.6	4.2	1.2e-13	51.1	4.2	1.8	1	0	0	1	1	1	1	SRP54-type	protein,	helical	bundle	domain
AAA_30	PF13604.6	gi|289596933|ref|YP_003483629.1|	-	6.2e-09	35.8	0.5	1.2e-08	34.9	0.5	1.4	1	0	0	1	1	1	1	AAA	domain
cobW	PF02492.19	gi|289596933|ref|YP_003483629.1|	-	1e-06	28.5	0.5	1.7e-06	27.7	0.5	1.3	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_17	PF13207.6	gi|289596933|ref|YP_003483629.1|	-	2.4e-06	28.0	0.2	2.4e-06	28.0	0.2	2.4	2	1	0	2	2	2	1	AAA	domain
CbiA	PF01656.23	gi|289596933|ref|YP_003483629.1|	-	3.8e-06	27.0	0.1	2.2e-05	24.5	0.0	2.2	2	1	0	2	2	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
APS_kinase	PF01583.20	gi|289596933|ref|YP_003483629.1|	-	7.5e-06	25.9	0.0	2e-05	24.6	0.0	1.7	1	0	0	1	1	1	1	Adenylylsulphate	kinase
Thymidylate_kin	PF02223.17	gi|289596933|ref|YP_003483629.1|	-	1.8e-05	24.5	0.4	0.00055	19.7	0.1	2.9	3	0	0	3	3	3	1	Thymidylate	kinase
AAA_16	PF13191.6	gi|289596933|ref|YP_003483629.1|	-	0.00012	22.5	0.0	0.00026	21.4	0.0	1.8	1	1	0	1	1	1	1	AAA	ATPase	domain
MeaB	PF03308.16	gi|289596933|ref|YP_003483629.1|	-	0.00016	20.7	0.9	0.0008	18.5	0.7	2.2	1	1	0	1	1	1	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
DUF2075	PF09848.9	gi|289596933|ref|YP_003483629.1|	-	0.00023	20.6	0.2	0.00033	20.0	0.2	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
MobB	PF03205.14	gi|289596933|ref|YP_003483629.1|	-	0.00024	21.0	2.2	0.0017	18.2	0.2	2.4	1	1	1	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA	PF00004.29	gi|289596933|ref|YP_003483629.1|	-	0.00033	21.1	0.3	0.00076	19.9	0.3	1.7	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Zeta_toxin	PF06414.12	gi|289596933|ref|YP_003483629.1|	-	0.00042	19.7	0.1	0.0011	18.3	0.0	1.7	1	1	0	1	1	1	1	Zeta	toxin
MMR_HSR1	PF01926.23	gi|289596933|ref|YP_003483629.1|	-	0.00071	19.6	2.7	0.00099	19.2	0.3	2.4	2	2	0	2	2	2	1	50S	ribosome-binding	GTPase
NTPase_1	PF03266.15	gi|289596933|ref|YP_003483629.1|	-	0.00097	19.1	3.2	0.014	15.3	0.1	2.6	3	0	0	3	3	2	1	NTPase
AAA_33	PF13671.6	gi|289596933|ref|YP_003483629.1|	-	0.0013	18.9	0.1	0.0022	18.2	0.1	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_28	PF13521.6	gi|289596933|ref|YP_003483629.1|	-	0.0018	18.6	0.1	0.005	17.1	0.1	1.8	1	1	1	2	2	2	1	AAA	domain
AAA_22	PF13401.6	gi|289596933|ref|YP_003483629.1|	-	0.0028	18.0	0.1	0.0084	16.4	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
LytR_C	PF13399.6	gi|289596933|ref|YP_003483629.1|	-	0.0056	17.6	0.3	0.037	15.0	0.3	2.5	1	1	0	1	1	1	1	LytR	cell	envelope-related	transcriptional	attenuator
KTI12	PF08433.10	gi|289596933|ref|YP_003483629.1|	-	0.011	15.2	0.0	0.024	14.1	0.0	1.5	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
6PF2K	PF01591.18	gi|289596933|ref|YP_003483629.1|	-	0.013	14.8	0.0	0.025	13.9	0.0	1.4	1	0	0	1	1	1	0	6-phosphofructo-2-kinase
ATPase	PF06745.13	gi|289596933|ref|YP_003483629.1|	-	0.016	14.6	1.7	0.023	14.0	0.1	1.9	1	1	1	2	2	2	0	KaiC
LpxK	PF02606.14	gi|289596933|ref|YP_003483629.1|	-	0.016	14.3	0.1	0.032	13.3	0.1	1.4	1	0	0	1	1	1	0	Tetraacyldisaccharide-1-P	4'-kinase
AAA_7	PF12775.7	gi|289596933|ref|YP_003483629.1|	-	0.017	14.6	0.0	0.036	13.6	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
DUF2855	PF11017.8	gi|289596933|ref|YP_003483629.1|	-	0.02	14.6	0.1	0.042	13.6	0.1	1.5	2	0	0	2	2	1	0	Protein	of	unknown	function	(DUF2855)
ABC_tran	PF00005.27	gi|289596933|ref|YP_003483629.1|	-	0.022	15.3	0.2	0.054	14.0	0.2	1.7	1	1	0	1	1	1	0	ABC	transporter
DUF853	PF05872.12	gi|289596933|ref|YP_003483629.1|	-	0.029	13.0	0.6	0.6	8.6	0.0	2.1	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF853)
AAA_5	PF07728.14	gi|289596933|ref|YP_003483629.1|	-	0.03	14.3	0.0	0.05	13.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_24	PF13479.6	gi|289596933|ref|YP_003483629.1|	-	0.03	14.0	0.0	0.059	13.1	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_19	PF13245.6	gi|289596933|ref|YP_003483629.1|	-	0.034	14.5	0.5	0.086	13.2	0.5	1.8	1	1	0	1	1	1	0	AAA	domain
RsgA_GTPase	PF03193.16	gi|289596933|ref|YP_003483629.1|	-	0.038	13.9	0.2	0.91	9.4	0.1	2.7	2	2	0	2	2	2	0	RsgA	GTPase
B12-binding	PF02310.19	gi|289596933|ref|YP_003483629.1|	-	0.039	14.0	0.9	0.3	11.1	0.2	2.7	2	1	0	2	2	2	0	B12	binding	domain
ResIII	PF04851.15	gi|289596933|ref|YP_003483629.1|	-	0.042	13.8	4.3	0.073	13.1	1.8	2.5	1	1	1	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
PIF1	PF05970.14	gi|289596933|ref|YP_003483629.1|	-	0.046	12.9	0.0	0.068	12.3	0.0	1.4	1	0	0	1	1	1	0	PIF1-like	helicase
SRPRB	PF09439.10	gi|289596933|ref|YP_003483629.1|	-	0.047	13.1	2.6	3.3	7.1	0.0	3.0	3	0	0	3	3	3	0	Signal	recognition	particle	receptor	beta	subunit
ATP_bind_1	PF03029.17	gi|289596933|ref|YP_003483629.1|	-	0.053	13.3	0.1	0.42	10.4	0.2	2.2	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
CLP1_P	PF16575.5	gi|289596933|ref|YP_003483629.1|	-	0.071	12.9	0.3	9.2	6.0	0.1	2.3	2	0	0	2	2	2	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
T2SSE	PF00437.20	gi|289596933|ref|YP_003483629.1|	-	0.073	12.1	0.0	0.12	11.4	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
Exo84_C	PF16528.5	gi|289596933|ref|YP_003483629.1|	-	0.076	12.8	0.6	0.14	12.0	0.6	1.4	1	0	0	1	1	1	0	Exocyst	component	84	C-terminal
GTP_EFTU	PF00009.27	gi|289596933|ref|YP_003483629.1|	-	0.085	12.4	2.2	0.079	12.5	0.4	1.8	2	0	0	2	2	2	0	Elongation	factor	Tu	GTP	binding	domain
AAA_18	PF13238.6	gi|289596933|ref|YP_003483629.1|	-	0.1	13.1	1.0	0.25	11.9	0.1	2.0	3	0	0	3	3	1	0	AAA	domain
ATP-synt_ab	PF00006.25	gi|289596933|ref|YP_003483629.1|	-	0.12	12.1	0.5	0.25	11.0	0.5	1.7	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
PPV_E1_C	PF00519.17	gi|289596933|ref|YP_003483629.1|	-	0.14	11.0	0.0	0.19	10.6	0.0	1.2	1	0	0	1	1	1	0	Papillomavirus	helicase
ArsA_ATPase	PF02374.15	gi|289596933|ref|YP_003483629.1|	-	0.14	11.3	2.1	0.39	9.9	0.5	2.3	1	1	0	2	2	2	0	Anion-transporting	ATPase
DFP	PF04127.15	gi|289596933|ref|YP_003483629.1|	-	0.15	11.9	7.2	0.019	14.8	2.8	1.7	2	1	0	2	2	1	0	DNA	/	pantothenate	metabolism	flavoprotein
NACHT	PF05729.12	gi|289596933|ref|YP_003483629.1|	-	0.15	12.0	0.1	0.28	11.1	0.1	1.4	1	0	0	1	1	1	0	NACHT	domain
DUF3912	PF13051.6	gi|289596933|ref|YP_003483629.1|	-	0.18	12.1	1.2	1.6	9.1	0.2	2.6	3	0	0	3	3	2	0	Protein	of	unknown	function	(DUF3912)
PTS_IIB	PF02302.17	gi|289596933|ref|YP_003483629.1|	-	4.5	8.1	7.0	3	8.6	0.1	3.0	2	1	1	3	3	2	0	PTS	system,	Lactose/Cellobiose	specific	IIB	subunit
AAA_23	PF13476.6	gi|289596933|ref|YP_003483629.1|	-	5.1	7.5	6.4	0.73	10.3	0.7	2.2	1	1	1	2	2	2	0	AAA	domain
PALP	PF00291.25	gi|289596934|ref|YP_003483630.1|	-	1.4e-54	185.5	0.0	1.6e-54	185.3	0.0	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
ATP-synt_ab	PF00006.25	gi|289596935|ref|YP_003483631.1|	-	3e-70	236.2	0.0	5.6e-70	235.3	0.0	1.4	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_N	PF02874.23	gi|289596935|ref|YP_003483631.1|	-	2.6e-14	53.5	0.8	5.1e-14	52.5	0.8	1.5	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
HAS-barrel	PF09378.10	gi|289596935|ref|YP_003483631.1|	-	9.6e-06	25.7	0.7	2.5e-05	24.3	0.7	1.7	1	0	0	1	1	1	1	HAS	barrel	domain
ATP-synt_ab	PF00006.25	gi|289596936|ref|YP_003483632.1|	-	3.5e-97	324.2	0.0	8.4e-97	323.0	0.0	1.6	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_Xtn	PF16886.5	gi|289596936|ref|YP_003483632.1|	-	2.4e-46	156.6	0.1	5e-46	155.5	0.1	1.6	1	0	0	1	1	1	1	ATPsynthase	alpha/beta	subunit	N-term	extension
ATP-synt_ab_N	PF02874.23	gi|289596936|ref|YP_003483632.1|	-	5.2e-16	58.9	4.2	5.2e-16	58.9	4.2	1.9	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
SERTA	PF06031.13	gi|289596936|ref|YP_003483632.1|	-	0.039	13.6	0.1	0.099	12.3	0.0	1.7	2	0	0	2	2	2	0	SERTA	motif
MIOX	PF05153.15	gi|289596936|ref|YP_003483632.1|	-	0.18	11.3	0.0	0.31	10.6	0.0	1.3	1	0	0	1	1	1	0	Myo-inositol	oxygenase
ATP-synt_F	PF01990.17	gi|289596937|ref|YP_003483633.1|	-	3.8e-20	72.0	0.3	4.5e-20	71.8	0.3	1.1	1	0	0	1	1	1	1	ATP	synthase	(F/14-kDa)	subunit
Phycobilisome	PF00502.19	gi|289596937|ref|YP_003483633.1|	-	0.047	13.6	0.0	0.065	13.2	0.0	1.1	1	0	0	1	1	1	0	Phycobilisome	protein
vATP-synt_AC39	PF01992.16	gi|289596938|ref|YP_003483634.1|	-	3.8e-45	154.8	7.9	4.3e-45	154.7	7.9	1.0	1	0	0	1	1	1	1	ATP	synthase	(C/AC39)	subunit
UPF0180	PF03698.13	gi|289596938|ref|YP_003483634.1|	-	0.047	13.9	0.1	1.7	8.9	0.0	2.4	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0180)
HTH_WhiA	PF02650.14	gi|289596938|ref|YP_003483634.1|	-	0.054	13.8	0.1	0.33	11.3	0.0	2.3	2	0	0	2	2	2	0	WhiA	C-terminal	HTH	domain
vATP-synt_E	PF01991.18	gi|289596939|ref|YP_003483635.1|	-	6.1e-10	38.8	16.3	3.4e-09	36.4	16.3	2.1	1	1	0	1	1	1	1	ATP	synthase	(E/31	kDa)	subunit
V-ATPase_G	PF03179.15	gi|289596939|ref|YP_003483635.1|	-	0.041	14.4	7.9	0.089	13.3	7.9	1.5	1	0	0	1	1	1	0	Vacuolar	(H+)-ATPase	G	subunit
GvpL_GvpF	PF06386.11	gi|289596939|ref|YP_003483635.1|	-	0.11	12.4	5.5	0.28	11.1	3.2	2.0	1	1	1	2	2	2	0	Gas	vesicle	synthesis	protein	GvpL/GvpF
ATP-synt_C	PF00137.21	gi|289596940|ref|YP_003483636.1|	-	3.6e-77	254.6	119.8	6.8e-17	61.6	11.8	7.7	6	2	1	7	7	7	7	ATP	synthase	subunit	C
PKD	PF00801.20	gi|289596940|ref|YP_003483636.1|	-	0.069	13.0	0.7	0.16	11.8	0.7	1.6	1	0	0	1	1	1	0	PKD	domain
V_ATPase_I	PF01496.19	gi|289596941|ref|YP_003483637.1|	-	2.3e-17	62.3	24.4	6.2e-10	37.7	2.4	4.5	4	1	1	5	5	5	4	V-type	ATPase	116kDa	subunit	family
ENT	PF03735.14	gi|289596941|ref|YP_003483637.1|	-	0.024	14.7	0.5	0.15	12.2	0.1	2.3	2	0	0	2	2	2	0	ENT	domain
DUF885	PF05960.11	gi|289596941|ref|YP_003483637.1|	-	0.19	11.4	0.4	0.99	9.0	0.1	1.9	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF885)
TMEM174	PF15029.6	gi|289596941|ref|YP_003483637.1|	-	0.28	10.9	2.7	0.55	9.9	2.7	1.4	1	0	0	1	1	1	0	Transmembrane	protein	174
V-ATPase_G_2	PF16999.5	gi|289596942|ref|YP_003483638.1|	-	0.00022	21.6	19.8	0.00029	21.2	19.8	1.0	1	0	0	1	1	1	1	Vacuolar	(H+)-ATPase	G	subunit
ATP-synt_B	PF00430.18	gi|289596942|ref|YP_003483638.1|	-	0.00094	19.3	17.3	0.00098	19.2	16.7	1.3	1	1	0	1	1	1	1	ATP	synthase	B/B'	CF(0)
Muted	PF14942.6	gi|289596942|ref|YP_003483638.1|	-	0.0061	16.9	12.4	0.0089	16.4	12.4	1.2	1	0	0	1	1	1	1	Organelle	biogenesis,	Muted-like	protein
V-ATPase_G	PF03179.15	gi|289596942|ref|YP_003483638.1|	-	0.011	16.3	17.9	0.014	16.0	17.9	1.2	1	0	0	1	1	1	0	Vacuolar	(H+)-ATPase	G	subunit
UvrD-helicase	PF00580.21	gi|289596942|ref|YP_003483638.1|	-	0.035	13.6	5.7	0.042	13.4	5.7	1.0	1	0	0	1	1	1	0	UvrD/REP	helicase	N-terminal	domain
GARP	PF16731.5	gi|289596942|ref|YP_003483638.1|	-	0.14	11.8	9.8	0.17	11.5	9.8	1.1	1	0	0	1	1	1	0	Glutamic	acid/alanine-rich	protein	of	Trypanosoma
SOAR	PF16533.5	gi|289596942|ref|YP_003483638.1|	-	0.24	11.4	10.3	0.099	12.6	4.7	2.0	1	1	1	2	2	2	0	STIM1	Orai1-activating	region
DUF5638	PF18688.1	gi|289596942|ref|YP_003483638.1|	-	0.28	11.5	5.5	0.57	10.5	5.3	1.7	1	1	1	2	2	2	0	Family	of	unknown	function	(DUF5638)
Questin_oxidase	PF14027.6	gi|289596942|ref|YP_003483638.1|	-	0.57	9.7	4.0	0.68	9.4	4.0	1.1	1	0	0	1	1	1	0	Questin	oxidase-like
Vps51	PF08700.11	gi|289596942|ref|YP_003483638.1|	-	0.66	10.1	6.1	0.32	11.1	2.4	2.0	1	1	1	2	2	2	0	Vps51/Vps67
CENP-H	PF05837.12	gi|289596942|ref|YP_003483638.1|	-	0.72	10.3	11.1	0.85	10.1	11.1	1.2	1	0	0	1	1	1	0	Centromere	protein	H	(CENP-H)
tRNA-synt_1b	PF00579.25	gi|289596942|ref|YP_003483638.1|	-	0.96	8.7	4.1	1.1	8.5	4.1	1.1	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(W	and	Y)
YtxH	PF12732.7	gi|289596942|ref|YP_003483638.1|	-	0.98	10.0	12.4	0.14	12.7	5.5	2.1	1	1	1	2	2	2	0	YtxH-like	protein
TipAS	PF07739.13	gi|289596942|ref|YP_003483638.1|	-	1	9.9	8.6	1.5	9.4	8.6	1.4	1	1	0	1	1	1	0	TipAS	antibiotic-recognition	domain
DUF883	PF05957.13	gi|289596942|ref|YP_003483638.1|	-	1.2	9.8	9.9	2.2	9.0	1.9	2.1	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF883)
TMPIT	PF07851.13	gi|289596942|ref|YP_003483638.1|	-	1.7	7.8	9.1	2	7.6	9.1	1.0	1	0	0	1	1	1	0	TMPIT-like	protein
DUF2335	PF10097.9	gi|289596942|ref|YP_003483638.1|	-	3	7.9	9.5	0.19	11.7	3.7	2.1	2	2	0	2	2	2	0	Predicted	membrane	protein	(DUF2335)
HAUS6_N	PF14661.6	gi|289596942|ref|YP_003483638.1|	-	3.2	7.3	9.1	4	7.0	9.1	1.1	1	0	0	1	1	1	0	HAUS	augmin-like	complex	subunit	6	N-terminus
DUF4404	PF14357.6	gi|289596942|ref|YP_003483638.1|	-	4	8.1	8.1	22	5.8	7.2	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4404)
ATP-synt_ab_C	PF00306.27	gi|289596942|ref|YP_003483638.1|	-	6.1	7.2	8.6	7.8	6.8	5.8	2.1	1	1	1	2	2	2	0	ATP	synthase	alpha/beta	chain,	C	terminal	domain
DUF4407	PF14362.6	gi|289596942|ref|YP_003483638.1|	-	7.3	5.8	8.5	8.6	5.6	8.5	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
COG2	PF06148.11	gi|289596942|ref|YP_003483638.1|	-	7.8	6.6	9.5	20	5.3	9.5	1.7	1	1	0	1	1	1	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
AAA_11	PF13086.6	gi|289596942|ref|YP_003483638.1|	-	8.4	6.1	10.6	9.4	5.9	10.6	1.1	1	0	0	1	1	1	0	AAA	domain
LamB_YcsF	PF03746.16	gi|289596943|ref|YP_003483639.1|	-	4.7e-103	344.0	0.0	5.3e-103	343.8	0.0	1.0	1	0	0	1	1	1	1	LamB/YcsF	family
CT_C_D	PF02682.16	gi|289596944|ref|YP_003483640.1|	-	1.5e-76	256.6	0.0	1.8e-76	256.4	0.0	1.0	1	0	0	1	1	1	1	Carboxyltransferase	domain,	subdomain	C	and	D
CT_A_B	PF02626.15	gi|289596945|ref|YP_003483641.1|	-	1.3e-83	280.7	0.0	1.5e-83	280.5	0.0	1.0	1	0	0	1	1	1	1	Carboxyltransferase	domain,	subdomain	A	and	B
Ala_racemase_N	PF01168.20	gi|289596946|ref|YP_003483642.1|	-	2.2e-23	83.0	0.0	2.5e-23	82.9	0.0	1.0	1	0	0	1	1	1	1	Alanine	racemase,	N-terminal	domain
Peptidase_C80	PF11713.8	gi|289596946|ref|YP_003483642.1|	-	0.01	16.1	0.0	0.014	15.6	0.0	1.2	1	0	0	1	1	1	0	Peptidase	C80	family
YpsA	PF06908.11	gi|289596946|ref|YP_003483642.1|	-	0.021	14.8	0.4	0.087	12.8	0.2	1.8	2	0	0	2	2	2	0	YspA	SLOG	family
INT_SG_DDX_CT_C	PF15300.6	gi|289596946|ref|YP_003483642.1|	-	0.03	14.1	0.1	0.29	11.0	0.0	2.6	3	0	0	3	3	3	0	INTS6/SAGE1/DDX26B/CT45	C-terminus
Orn_Arg_deC_N	PF02784.16	gi|289596946|ref|YP_003483642.1|	-	0.035	13.5	0.0	0.057	12.8	0.0	1.4	1	1	0	1	1	1	0	Pyridoxal-dependent	decarboxylase,	pyridoxal	binding	domain
DUF2840	PF11000.8	gi|289596946|ref|YP_003483642.1|	-	0.05	13.4	0.4	1.8	8.4	0.0	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2840)
Phasin	PF05597.11	gi|289596946|ref|YP_003483642.1|	-	0.053	13.5	0.5	0.088	12.8	0.5	1.3	1	0	0	1	1	1	0	Poly(hydroxyalcanoate)	granule	associated	protein	(phasin)
ABC_transp_aux	PF09822.9	gi|289596946|ref|YP_003483642.1|	-	0.12	11.8	1.8	0.14	11.6	0.6	1.6	1	1	0	2	2	2	0	ABC-type	uncharacterized	transport	system
DUF2433	PF10360.9	gi|289596946|ref|YP_003483642.1|	-	0.16	12.1	0.4	0.31	11.1	0.4	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2433)
Peptidase_C15	PF01470.17	gi|289596947|ref|YP_003483643.1|	-	2.3e-68	230.4	0.0	2.6e-68	230.2	0.0	1.0	1	0	0	1	1	1	1	Pyroglutamyl	peptidase
ABC_membrane	PF00664.23	gi|289596948|ref|YP_003483644.1|	-	4.6e-46	157.7	22.3	4.6e-46	157.7	22.3	1.6	2	0	0	2	2	2	1	ABC	transporter	transmembrane	region
ABC_tran	PF00005.27	gi|289596948|ref|YP_003483644.1|	-	1.4e-35	122.7	0.0	2.7e-35	121.8	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
NTPase_1	PF03266.15	gi|289596948|ref|YP_003483644.1|	-	4.4e-05	23.4	0.4	0.0011	18.9	0.0	2.3	2	0	0	2	2	2	1	NTPase
AAA_16	PF13191.6	gi|289596948|ref|YP_003483644.1|	-	5.2e-05	23.7	0.0	0.00012	22.5	0.0	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_29	PF13555.6	gi|289596948|ref|YP_003483644.1|	-	0.00019	21.1	0.0	0.00047	19.8	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_18	PF13238.6	gi|289596948|ref|YP_003483644.1|	-	0.00075	20.0	0.0	0.0017	18.9	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_10	PF12846.7	gi|289596948|ref|YP_003483644.1|	-	0.00083	18.4	0.0	0.0012	17.8	0.0	1.2	1	0	0	1	1	1	1	AAA-like	domain
AAA_30	PF13604.6	gi|289596948|ref|YP_003483644.1|	-	0.0014	18.3	0.0	0.0031	17.2	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
T2SSE	PF00437.20	gi|289596948|ref|YP_003483644.1|	-	0.0018	17.4	0.0	0.0048	16.0	0.0	1.7	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
Zeta_toxin	PF06414.12	gi|289596948|ref|YP_003483644.1|	-	0.0021	17.3	0.0	0.01	15.1	0.0	2.0	2	0	0	2	2	2	1	Zeta	toxin
AAA	PF00004.29	gi|289596948|ref|YP_003483644.1|	-	0.0025	18.2	0.1	0.0075	16.7	0.1	1.9	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Rad17	PF03215.15	gi|289596948|ref|YP_003483644.1|	-	0.0026	17.7	0.0	0.0097	15.8	0.0	1.9	2	0	0	2	2	2	1	Rad17	P-loop	domain
AAA_22	PF13401.6	gi|289596948|ref|YP_003483644.1|	-	0.0034	17.7	0.0	0.0088	16.3	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.6	gi|289596948|ref|YP_003483644.1|	-	0.0058	16.4	0.3	0.0058	16.4	0.3	1.6	2	0	0	2	2	1	1	AAA	ATPase	domain
AAA_24	PF13479.6	gi|289596948|ref|YP_003483644.1|	-	0.01	15.6	0.0	0.017	14.8	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
G-alpha	PF00503.20	gi|289596948|ref|YP_003483644.1|	-	0.013	14.7	0.0	0.021	14.0	0.0	1.3	1	0	0	1	1	1	0	G-protein	alpha	subunit
AAA_21	PF13304.6	gi|289596948|ref|YP_003483644.1|	-	0.014	15.2	5.6	0.058	13.2	0.2	2.9	3	1	0	4	4	3	0	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_14	PF13173.6	gi|289596948|ref|YP_003483644.1|	-	0.014	15.4	0.3	0.035	14.2	0.0	1.8	2	0	0	2	2	1	0	AAA	domain
AAA_19	PF13245.6	gi|289596948|ref|YP_003483644.1|	-	0.018	15.3	0.0	0.055	13.8	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
RuvB_N	PF05496.12	gi|289596948|ref|YP_003483644.1|	-	0.032	14.0	0.3	0.098	12.4	0.0	2.0	2	0	0	2	2	2	0	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
ATPase_2	PF01637.18	gi|289596948|ref|YP_003483644.1|	-	0.032	14.1	0.0	0.074	12.9	0.0	1.5	1	0	0	1	1	1	0	ATPase	domain	predominantly	from	Archaea
Mg_chelatase	PF01078.21	gi|289596948|ref|YP_003483644.1|	-	0.032	13.6	0.0	0.062	12.7	0.0	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
IstB_IS21	PF01695.17	gi|289596948|ref|YP_003483644.1|	-	0.033	13.9	0.3	0.16	11.7	0.0	2.2	3	0	0	3	3	2	0	IstB-like	ATP	binding	protein
AAA_5	PF07728.14	gi|289596948|ref|YP_003483644.1|	-	0.034	14.1	0.0	0.082	12.9	0.0	1.6	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_28	PF13521.6	gi|289596948|ref|YP_003483644.1|	-	0.044	14.0	0.0	0.077	13.2	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_23	PF13476.6	gi|289596948|ref|YP_003483644.1|	-	0.047	14.2	0.1	0.047	14.2	0.1	2.1	3	0	0	3	3	1	0	AAA	domain
AAA_13	PF13166.6	gi|289596948|ref|YP_003483644.1|	-	0.052	12.2	0.0	1.8	7.1	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
SMC_N	PF02463.19	gi|289596948|ref|YP_003483644.1|	-	0.07	12.5	0.2	2.9	7.3	0.2	2.4	1	1	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
MeaB	PF03308.16	gi|289596948|ref|YP_003483644.1|	-	0.093	11.7	0.0	0.16	10.9	0.0	1.3	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
AAA_17	PF13207.6	gi|289596948|ref|YP_003483644.1|	-	0.093	13.2	0.0	0.2	12.1	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
DUF815	PF05673.13	gi|289596948|ref|YP_003483644.1|	-	0.097	11.8	0.0	0.17	11.0	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
ResIII	PF04851.15	gi|289596948|ref|YP_003483644.1|	-	0.11	12.5	0.0	0.26	11.3	0.0	1.6	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
AAA_11	PF13086.6	gi|289596948|ref|YP_003483644.1|	-	0.12	12.2	0.0	0.23	11.2	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
SRP54	PF00448.22	gi|289596948|ref|YP_003483644.1|	-	0.12	11.9	0.0	0.3	10.7	0.0	1.7	2	0	0	2	2	1	0	SRP54-type	protein,	GTPase	domain
cobW	PF02492.19	gi|289596948|ref|YP_003483644.1|	-	0.12	11.9	0.0	0.22	11.1	0.0	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
Viral_helicase1	PF01443.18	gi|289596948|ref|YP_003483644.1|	-	0.22	11.2	0.0	0.34	10.6	0.0	1.3	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
RuvA_C	PF07499.13	gi|289596948|ref|YP_003483644.1|	-	0.3	11.6	1.3	33	5.0	0.2	2.9	3	0	0	3	3	2	0	RuvA,	C-terminal	domain
ABC_membrane	PF00664.23	gi|289596949|ref|YP_003483645.1|	-	1.2e-54	185.9	14.7	1.4e-54	185.6	14.7	1.1	1	0	0	1	1	1	1	ABC	transporter	transmembrane	region
ABC_tran	PF00005.27	gi|289596949|ref|YP_003483645.1|	-	7e-31	107.6	0.0	1.2e-30	106.8	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_25	PF13481.6	gi|289596949|ref|YP_003483645.1|	-	0.0008	19.0	0.0	0.0025	17.4	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
AAA	PF00004.29	gi|289596949|ref|YP_003483645.1|	-	0.0012	19.3	0.3	0.044	14.2	0.3	2.5	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.6	gi|289596949|ref|YP_003483645.1|	-	0.0019	18.5	0.1	0.012	15.9	0.1	2.2	1	1	0	1	1	1	1	AAA	domain
ABC_membrane_2	PF06472.15	gi|289596949|ref|YP_003483645.1|	-	0.0047	16.4	5.2	0.0047	16.4	5.2	1.9	2	0	0	2	2	2	1	ABC	transporter	transmembrane	region	2
AAA_21	PF13304.6	gi|289596949|ref|YP_003483645.1|	-	0.011	15.5	0.3	1.7	8.4	0.0	2.3	1	1	0	2	2	2	0	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|289596949|ref|YP_003483645.1|	-	0.02	14.3	0.0	0.043	13.3	0.0	1.5	1	1	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
AAA_18	PF13238.6	gi|289596949|ref|YP_003483645.1|	-	0.044	14.3	0.0	0.13	12.8	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
DEAD	PF00270.29	gi|289596949|ref|YP_003483645.1|	-	0.076	12.8	0.5	0.55	10.0	0.5	2.2	1	1	0	1	1	1	0	DEAD/DEAH	box	helicase
CbiA	PF01656.23	gi|289596949|ref|YP_003483645.1|	-	0.095	12.8	0.0	5.1	7.2	0.9	2.5	1	1	1	2	2	2	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
IstB_IS21	PF01695.17	gi|289596949|ref|YP_003483645.1|	-	0.12	12.1	0.2	15	5.3	0.0	2.3	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA_7	PF12775.7	gi|289596949|ref|YP_003483645.1|	-	0.13	11.7	0.0	0.29	10.6	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
AAA_5	PF07728.14	gi|289596949|ref|YP_003483645.1|	-	0.14	12.2	0.1	0.56	10.2	0.1	2.2	2	1	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
AAA_17	PF13207.6	gi|289596949|ref|YP_003483645.1|	-	0.14	12.6	0.0	0.34	11.3	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
AAA_24	PF13479.6	gi|289596949|ref|YP_003483645.1|	-	0.16	11.7	0.0	0.33	10.7	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.12	gi|289596949|ref|YP_003483645.1|	-	0.17	11.2	0.1	1.1	8.5	0.0	2.2	3	0	0	3	3	3	0	Zeta	toxin
adh_short	PF00106.25	gi|289596950|ref|YP_003483646.1|	-	9.8e-60	201.4	0.2	1.1e-59	201.1	0.2	1.0	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.6	gi|289596950|ref|YP_003483646.1|	-	5.6e-56	189.7	0.1	7.5e-56	189.3	0.1	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.10	gi|289596950|ref|YP_003483646.1|	-	1.5e-14	54.4	0.1	2.1e-14	53.9	0.1	1.2	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.21	gi|289596950|ref|YP_003483646.1|	-	8.2e-06	25.5	0.1	1.5e-05	24.6	0.1	1.4	2	0	0	2	2	2	1	NAD	dependent	epimerase/dehydratase	family
Thioredoxin_3	PF13192.6	gi|289596951|ref|YP_003483647.1|	-	5.9e-27	93.5	0.1	1.7e-17	63.3	0.0	2.4	2	0	0	2	2	2	2	Thioredoxin	domain
Glutaredoxin	PF00462.24	gi|289596951|ref|YP_003483647.1|	-	5.1e-11	42.6	0.4	2.2e-06	27.8	0.1	3.0	3	0	0	3	3	3	2	Glutaredoxin
Thioredoxin_9	PF14595.6	gi|289596951|ref|YP_003483647.1|	-	4.5e-07	29.7	0.5	0.0061	16.3	0.4	2.2	1	1	1	2	2	2	2	Thioredoxin
Thioredoxin	PF00085.20	gi|289596951|ref|YP_003483647.1|	-	5.5e-07	29.5	0.1	0.0075	16.2	0.1	2.2	2	0	0	2	2	2	2	Thioredoxin
Thioredoxin_2	PF13098.6	gi|289596951|ref|YP_003483647.1|	-	8.8e-06	26.1	4.0	0.86	10.1	0.2	4.1	2	2	0	2	2	2	2	Thioredoxin-like	domain
TraF	PF13728.6	gi|289596951|ref|YP_003483647.1|	-	0.00023	21.0	0.0	0.29	10.9	0.0	3.1	2	1	0	2	2	2	2	F	plasmid	transfer	operon	protein
Thioredoxin_4	PF13462.6	gi|289596951|ref|YP_003483647.1|	-	0.0011	19.2	0.3	2.7	8.1	0.0	3.4	3	1	1	4	4	4	1	Thioredoxin
Thioredoxin_8	PF13905.6	gi|289596951|ref|YP_003483647.1|	-	0.0092	16.3	0.2	4.7	7.6	0.0	3.4	2	2	1	3	3	3	1	Thioredoxin-like
Transketolase_C	PF02780.20	gi|289596951|ref|YP_003483647.1|	-	0.11	12.4	0.0	0.26	11.2	0.0	1.7	1	0	0	1	1	1	0	Transketolase,	C-terminal	domain
Pyr_redox_2	PF07992.14	gi|289596952|ref|YP_003483648.1|	-	2.1e-50	171.6	8.4	2.5e-50	171.4	8.4	1.0	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|289596952|ref|YP_003483648.1|	-	9e-27	94.1	14.6	2.4e-20	73.0	3.0	2.6	1	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|289596952|ref|YP_003483648.1|	-	1.6e-14	54.2	6.1	5.9e-12	46.0	0.1	3.2	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.22	gi|289596952|ref|YP_003483648.1|	-	3.3e-11	42.9	13.7	0.0016	17.6	0.2	4.1	3	1	0	4	4	4	4	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.14	gi|289596952|ref|YP_003483648.1|	-	2.3e-10	39.7	10.6	0.00043	19.1	2.1	3.6	3	1	0	3	3	3	3	HI0933-like	protein
FAD_binding_2	PF00890.24	gi|289596952|ref|YP_003483648.1|	-	3.9e-10	39.4	11.2	6.9e-05	22.1	3.1	4.5	3	1	2	5	5	5	3	FAD	binding	domain
FAD_binding_3	PF01494.19	gi|289596952|ref|YP_003483648.1|	-	8.4e-08	31.8	8.5	0.00055	19.3	1.0	3.1	2	1	1	3	3	3	2	FAD	binding	domain
NAD_binding_8	PF13450.6	gi|289596952|ref|YP_003483648.1|	-	1.4e-07	31.7	0.9	0.0015	18.7	0.8	2.5	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
DAO	PF01266.24	gi|289596952|ref|YP_003483648.1|	-	1.3e-06	28.2	11.9	0.012	15.2	1.6	3.9	4	0	0	4	4	4	3	FAD	dependent	oxidoreductase
FAD_oxidored	PF12831.7	gi|289596952|ref|YP_003483648.1|	-	8.4e-06	25.4	8.4	3.9e-05	23.2	0.1	3.1	2	1	1	3	3	3	1	FAD	dependent	oxidoreductase
IlvN	PF07991.12	gi|289596952|ref|YP_003483648.1|	-	0.00033	20.3	1.0	0.0015	18.1	0.1	2.2	2	0	0	2	2	2	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
Thi4	PF01946.17	gi|289596952|ref|YP_003483648.1|	-	0.0009	18.6	6.0	0.009	15.3	0.4	2.8	2	1	1	3	3	3	1	Thi4	family
K_oxygenase	PF13434.6	gi|289596952|ref|YP_003483648.1|	-	0.0011	18.2	3.0	0.19	10.8	0.0	3.2	2	1	1	3	3	3	1	L-lysine	6-monooxygenase	(NADPH-requiring)
AlaDh_PNT_C	PF01262.21	gi|289596952|ref|YP_003483648.1|	-	0.0011	18.3	3.6	0.086	12.1	0.1	2.7	3	0	0	3	3	3	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
Lycopene_cycl	PF05834.12	gi|289596952|ref|YP_003483648.1|	-	0.027	13.5	2.0	0.31	10.0	1.0	2.7	2	1	1	3	3	3	0	Lycopene	cyclase	protein
NAD_binding_7	PF13241.6	gi|289596952|ref|YP_003483648.1|	-	0.19	12.2	0.4	3.5	8.1	0.1	2.3	2	0	0	2	2	2	0	Putative	NAD(P)-binding
FMO-like	PF00743.19	gi|289596952|ref|YP_003483648.1|	-	0.32	9.3	2.4	1.8	6.9	0.0	2.5	3	0	0	3	3	3	0	Flavin-binding	monooxygenase-like
Trp_halogenase	PF04820.14	gi|289596952|ref|YP_003483648.1|	-	1	8.2	5.5	0.96	8.2	0.3	2.2	2	0	0	2	2	2	0	Tryptophan	halogenase
NAD_binding_9	PF13454.6	gi|289596952|ref|YP_003483648.1|	-	6	6.8	9.0	28	4.7	0.0	3.4	4	0	0	4	4	4	0	FAD-NAD(P)-binding
eIF-1a	PF01176.19	gi|289596953|ref|YP_003483649.1|	-	6.9e-22	77.0	0.4	8.9e-22	76.7	0.4	1.1	1	0	0	1	1	1	1	Translation	initiation	factor	1A	/	IF-1
RIO1	PF01163.22	gi|289596954|ref|YP_003483650.1|	-	1.7e-54	184.3	0.5	2.5e-54	183.7	0.5	1.1	1	0	0	1	1	1	1	RIO1	family
Kdo	PF06293.14	gi|289596954|ref|YP_003483650.1|	-	1.3e-08	34.4	0.0	3.9e-08	32.9	0.0	1.6	1	1	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
Pkinase	PF00069.25	gi|289596954|ref|YP_003483650.1|	-	3.4e-05	23.3	3.2	0.00011	21.6	3.1	1.8	1	1	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.17	gi|289596954|ref|YP_003483650.1|	-	0.00021	20.7	0.3	0.00045	19.6	0.3	1.7	1	1	0	1	1	1	1	Protein	tyrosine	kinase
APH	PF01636.23	gi|289596954|ref|YP_003483650.1|	-	0.0015	18.5	0.0	0.19	11.6	0.0	2.1	1	1	1	2	2	2	2	Phosphotransferase	enzyme	family
Pkinase_fungal	PF17667.1	gi|289596954|ref|YP_003483650.1|	-	0.0039	16.0	0.0	0.0039	16.0	0.0	1.1	1	0	0	1	1	1	1	Fungal	protein	kinase
KH_1	PF00013.29	gi|289596955|ref|YP_003483651.1|	-	1.3e-15	56.9	5.8	2.8e-08	33.4	0.1	2.3	2	0	0	2	2	2	2	KH	domain
KH_8	PF17903.1	gi|289596955|ref|YP_003483651.1|	-	0.00013	22.0	0.0	0.00026	21.0	0.0	1.4	1	0	0	1	1	1	1	Krr1	KH1	domain
KH_4	PF13083.6	gi|289596955|ref|YP_003483651.1|	-	0.0013	18.5	2.0	1	9.3	0.1	2.8	2	0	0	2	2	2	2	KH	domain
KH_2	PF07650.17	gi|289596955|ref|YP_003483651.1|	-	0.0057	16.5	10.2	0.078	12.8	1.8	3.1	2	2	0	2	2	2	2	KH	domain
Na_H_Exchanger	PF00999.21	gi|289596956|ref|YP_003483652.1|	-	6.8e-49	166.7	51.0	8.8e-49	166.3	51.0	1.0	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
Rick_17kDa_Anti	PF05433.15	gi|289596956|ref|YP_003483652.1|	-	2.7	7.9	10.1	0.66	9.9	1.5	3.4	4	0	0	4	4	4	0	Glycine	zipper	2TM	domain
DUF99	PF01949.16	gi|289596957|ref|YP_003483653.1|	-	3.6e-66	222.1	0.0	4e-66	221.9	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF99
DUF836	PF05768.14	gi|289596957|ref|YP_003483653.1|	-	0.13	12.7	0.0	0.3	11.5	0.0	1.8	1	1	0	1	1	1	0	Glutaredoxin-like	domain	(DUF836)
PTH2	PF01981.16	gi|289596958|ref|YP_003483654.1|	-	5e-41	139.7	0.0	5.5e-41	139.5	0.0	1.0	1	0	0	1	1	1	1	Peptidyl-tRNA	hydrolase	PTH2
DUF1616	PF07760.11	gi|289596959|ref|YP_003483655.1|	-	9.6e-15	54.7	2.5	1.3e-14	54.3	2.5	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1616)
Halogen_Hydrol	PF10112.9	gi|289596959|ref|YP_003483655.1|	-	0.013	15.6	0.0	0.023	14.7	0.0	1.5	1	0	0	1	1	1	0	5-bromo-4-chloroindolyl	phosphate	hydrolysis	protein
FapA	PF03961.13	gi|289596959|ref|YP_003483655.1|	-	0.06	11.9	0.1	0.068	11.8	0.1	1.0	1	0	0	1	1	1	0	Flagellar	Assembly	Protein	A
Bax1-I	PF01027.20	gi|289596959|ref|YP_003483655.1|	-	0.21	11.4	9.2	0.35	10.7	9.2	1.3	1	1	0	1	1	1	0	Inhibitor	of	apoptosis-promoting	Bax1
DUF1204	PF06721.11	gi|289596959|ref|YP_003483655.1|	-	0.21	11.0	7.8	0.25	10.7	7.8	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1204)
Vma12	PF11712.8	gi|289596959|ref|YP_003483655.1|	-	0.8	9.8	4.3	1.6	8.8	0.1	2.5	2	1	0	2	2	2	0	Endoplasmic	reticulum-based	factor	for	assembly	of	V-ATPase
UCMA	PF17085.5	gi|289596959|ref|YP_003483655.1|	-	1.5	8.8	6.3	2.1	8.4	6.3	1.2	1	0	0	1	1	1	0	Unique	cartilage	matrix	associated	protein
Phage_holin_3_6	PF07332.11	gi|289596959|ref|YP_003483655.1|	-	2.1	8.4	4.3	0.4	10.7	0.2	1.8	2	0	0	2	2	2	0	Putative	Actinobacterial	Holin-X,	holin	superfamily	III
Radical_SAM	PF04055.21	gi|289596960|ref|YP_003483656.1|	-	3.7e-16	60.0	0.1	1.4e-15	58.1	0.0	2.0	2	0	0	2	2	2	1	Radical	SAM	superfamily
HHH_3	PF12836.7	gi|289596960|ref|YP_003483656.1|	-	2.7e-08	33.9	0.0	6.3e-08	32.8	0.0	1.6	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH	PF00633.23	gi|289596960|ref|YP_003483656.1|	-	0.00056	19.6	0.0	0.0014	18.4	0.0	1.7	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_5	PF14520.6	gi|289596960|ref|YP_003483656.1|	-	0.061	13.9	0.0	0.15	12.7	0.0	1.6	1	0	0	1	1	1	0	Helix-hairpin-helix	domain
Cpn60_TCP1	PF00118.24	gi|289596961|ref|YP_003483657.1|	-	6.3e-186	618.8	23.8	7.1e-186	618.6	23.8	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
Spb1_C	PF07780.12	gi|289596961|ref|YP_003483657.1|	-	0.068	12.8	5.2	0.094	12.3	3.5	2.1	1	1	1	2	2	2	0	Spb1	C-terminal	domain
YwpF	PF14183.6	gi|289596961|ref|YP_003483657.1|	-	0.098	12.7	8.1	0.04	13.9	2.1	2.9	3	0	0	3	3	3	0	YwpF-like	protein
Ustilago_mating	PF05722.12	gi|289596961|ref|YP_003483657.1|	-	0.15	11.5	0.0	0.38	10.2	0.0	1.6	2	0	0	2	2	2	0	Ustilago	B	locus	mating-type	protein
Radical_SAM	PF04055.21	gi|289596962|ref|YP_003483658.1|	-	2.3e-05	24.9	0.0	5.6e-05	23.6	0.0	1.6	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|289596962|ref|YP_003483658.1|	-	0.067	13.3	0.0	0.14	12.3	0.0	1.5	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
Pyr_redox_3	PF13738.6	gi|289596963|ref|YP_003483659.1|	-	7.9e-23	81.2	1.0	2e-14	53.6	0.1	2.2	1	1	1	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.14	gi|289596963|ref|YP_003483659.1|	-	1.5e-21	76.9	1.4	4.4e-21	75.4	1.2	1.8	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.14	gi|289596963|ref|YP_003483659.1|	-	5.7e-08	31.9	0.1	0.0023	16.7	0.1	2.3	1	1	1	2	2	2	2	HI0933-like	protein
Pyr_redox	PF00070.27	gi|289596963|ref|YP_003483659.1|	-	8.5e-08	32.7	2.9	0.00094	19.7	0.1	3.2	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.24	gi|289596963|ref|YP_003483659.1|	-	3.6e-07	30.1	0.1	0.0007	19.3	0.0	2.9	1	1	1	3	3	3	2	FAD	dependent	oxidoreductase
GIDA	PF01134.22	gi|289596963|ref|YP_003483659.1|	-	1.7e-06	27.4	0.4	0.036	13.2	0.0	2.4	2	0	0	2	2	2	2	Glucose	inhibited	division	protein	A
NAD_binding_8	PF13450.6	gi|289596963|ref|YP_003483659.1|	-	2.3e-06	27.7	0.0	7e-06	26.2	0.0	1.9	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_3	PF01494.19	gi|289596963|ref|YP_003483659.1|	-	2.6e-05	23.6	0.0	0.00022	20.6	0.0	2.1	2	0	0	2	2	2	1	FAD	binding	domain
NAD_binding_9	PF13454.6	gi|289596963|ref|YP_003483659.1|	-	0.00038	20.5	0.0	0.13	12.3	0.1	2.4	1	1	1	2	2	2	2	FAD-NAD(P)-binding
Thi4	PF01946.17	gi|289596963|ref|YP_003483659.1|	-	0.0088	15.3	0.1	0.017	14.4	0.1	1.6	1	0	0	1	1	1	1	Thi4	family
FAD_oxidored	PF12831.7	gi|289596963|ref|YP_003483659.1|	-	0.023	14.1	0.1	0.054	12.8	0.0	1.6	1	1	1	2	2	2	0	FAD	dependent	oxidoreductase
NAD_binding_7	PF13241.6	gi|289596963|ref|YP_003483659.1|	-	0.026	15.0	0.3	3	8.3	0.0	2.4	2	1	0	2	2	2	0	Putative	NAD(P)-binding
AlaDh_PNT_C	PF01262.21	gi|289596963|ref|YP_003483659.1|	-	0.08	12.2	0.0	13	5.0	0.0	2.3	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
FAD_binding_2	PF00890.24	gi|289596963|ref|YP_003483659.1|	-	0.097	11.7	0.1	0.15	11.1	0.1	1.3	1	0	0	1	1	1	0	FAD	binding	domain
Trp_halogenase	PF04820.14	gi|289596963|ref|YP_003483659.1|	-	0.11	11.3	2.2	1.2	8.0	0.1	2.9	3	1	1	4	4	4	0	Tryptophan	halogenase
Lycopene_cycl	PF05834.12	gi|289596963|ref|YP_003483659.1|	-	0.15	11.1	0.0	0.24	10.4	0.0	1.3	1	0	0	1	1	1	0	Lycopene	cyclase	protein
Isochorismatase	PF00857.20	gi|289596964|ref|YP_003483660.1|	-	1.4e-39	136.1	0.0	1.6e-39	135.9	0.0	1.0	1	0	0	1	1	1	1	Isochorismatase	family
Amidohydro_1	PF01979.20	gi|289596965|ref|YP_003483661.1|	-	6.7e-26	91.4	0.4	2.2e-25	89.7	0.4	1.7	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.11	gi|289596965|ref|YP_003483661.1|	-	2.6e-21	76.7	0.1	1.3e-12	48.0	0.0	2.2	1	1	1	2	2	2	2	Amidohydrolase	family
CDCA	PF18484.1	gi|289596965|ref|YP_003483661.1|	-	0.049	13.5	0.0	0.095	12.6	0.0	1.4	1	0	0	1	1	1	0	Cadmium	carbonic	anhydrase	repeat
Acetyltransf_1	PF00583.25	gi|289596966|ref|YP_003483662.1|	-	2.6e-17	63.1	0.1	3.4e-17	62.7	0.1	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.7	gi|289596966|ref|YP_003483662.1|	-	1e-13	51.5	0.1	1.4e-13	51.1	0.1	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.7	gi|289596966|ref|YP_003483662.1|	-	3.9e-13	49.4	0.0	3.9e-13	49.4	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.10	gi|289596966|ref|YP_003483662.1|	-	6.4e-05	22.8	0.1	0.0001	22.2	0.1	1.4	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_4	PF13420.7	gi|289596966|ref|YP_003483662.1|	-	0.00019	21.6	0.3	0.00043	20.5	0.3	1.6	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.7	gi|289596966|ref|YP_003483662.1|	-	0.00039	20.5	0.0	0.0046	17.0	0.0	2.1	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.6	gi|289596966|ref|YP_003483662.1|	-	0.0012	18.6	0.0	0.0016	18.2	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.7	gi|289596966|ref|YP_003483662.1|	-	0.0015	19.2	0.1	0.0029	18.3	0.1	1.5	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.6	gi|289596966|ref|YP_003483662.1|	-	0.031	14.4	0.0	0.051	13.7	0.0	1.4	1	0	0	1	1	1	0	GCN5-related	N-acetyl-transferase
AdoMet_Synthase	PF01941.19	gi|289596967|ref|YP_003483663.1|	-	3.6e-173	575.9	1.8	4e-173	575.7	1.8	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	synthetase	(AdoMet	synthetase)
Queuosine_synth	PF02547.15	gi|289596968|ref|YP_003483664.1|	-	2.7e-121	404.7	0.0	3e-121	404.5	0.0	1.0	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein
Serpin	PF00079.20	gi|289596970|ref|YP_003483666.1|	-	4.7e-106	355.2	0.1	5.4e-106	355.0	0.1	1.0	1	0	0	1	1	1	1	Serpin	(serine	protease	inhibitor)
DsrC	PF04358.13	gi|289596970|ref|YP_003483666.1|	-	0.17	12.4	0.2	0.31	11.6	0.2	1.4	1	0	0	1	1	1	0	DsrC	like	protein
OppC_N	PF12911.7	gi|289596970|ref|YP_003483666.1|	-	0.3	11.1	1.7	0.91	9.6	1.7	1.8	1	0	0	1	1	1	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
MoaC	PF01967.21	gi|289596971|ref|YP_003483667.1|	-	7.5e-48	162.1	0.5	8.4e-48	161.9	0.5	1.0	1	0	0	1	1	1	1	MoaC	family
MoCF_biosynth	PF00994.24	gi|289596972|ref|YP_003483668.1|	-	7.8e-29	100.2	0.2	9.1e-29	100.0	0.2	1.0	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
UPF0560	PF10577.9	gi|289596973|ref|YP_003483669.1|	-	0.62	8.5	0.8	0.8	8.1	0.8	1.0	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0560
Peptidase_M18	PF02127.15	gi|289596974|ref|YP_003483670.1|	-	6.5e-100	334.9	0.0	7.5e-100	334.7	0.0	1.0	1	0	0	1	1	1	1	Aminopeptidase	I	zinc	metalloprotease	(M18)
Peptidase_M42	PF05343.14	gi|289596974|ref|YP_003483670.1|	-	2.3e-06	26.9	0.2	0.008	15.2	0.0	2.7	3	0	0	3	3	3	2	M42	glutamyl	aminopeptidase
Memo	PF01875.17	gi|289596975|ref|YP_003483671.1|	-	8.8e-73	244.8	0.0	1e-72	244.6	0.0	1.0	1	0	0	1	1	1	1	Memo-like	protein
LigB	PF02900.18	gi|289596975|ref|YP_003483671.1|	-	5.7e-06	25.6	0.0	7.6e-06	25.2	0.0	1.3	1	0	0	1	1	1	1	Catalytic	LigB	subunit	of	aromatic	ring-opening	dioxygenase
Ribosomal_S2	PF00318.20	gi|289596976|ref|YP_003483672.1|	-	3.3e-27	95.1	0.2	2.4e-14	53.1	0.3	2.1	1	1	1	2	2	2	2	Ribosomal	protein	S2
Enolase_C	PF00113.22	gi|289596977|ref|YP_003483673.1|	-	4.8e-68	229.6	1.3	5.9e-68	229.3	0.7	1.4	2	0	0	2	2	2	1	Enolase,	C-terminal	TIM	barrel	domain
Enolase_N	PF03952.16	gi|289596977|ref|YP_003483673.1|	-	3.4e-35	121.1	0.0	5.8e-35	120.3	0.0	1.4	1	0	0	1	1	1	1	Enolase,	N-terminal	domain
MR_MLE_C	PF13378.6	gi|289596977|ref|YP_003483673.1|	-	3.2e-07	30.1	0.0	6e-07	29.2	0.0	1.4	1	0	0	1	1	1	1	Enolase	C-terminal	domain-like
MAAL_C	PF07476.11	gi|289596977|ref|YP_003483673.1|	-	1.1e-05	24.7	0.1	2e-05	23.9	0.1	1.4	1	0	0	1	1	1	1	Methylaspartate	ammonia-lyase	C-terminus
tRNA-Thr_ED	PF08915.11	gi|289596979|ref|YP_003483675.1|	-	1e-51	174.6	1.7	1.2e-51	174.4	0.7	1.7	2	0	0	2	2	2	1	Archaea-specific	editing	domain	of	threonyl-tRNA	synthetase
tRNA-synt_2b	PF00587.25	gi|289596979|ref|YP_003483675.1|	-	2.2e-18	66.8	1.0	5e-18	65.7	0.2	2.0	2	0	0	2	2	2	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.20	gi|289596979|ref|YP_003483675.1|	-	1.3e-16	60.5	1.6	4.2e-16	58.9	0.8	2.4	2	0	0	2	2	2	1	Anticodon	binding	domain
DUF2721	PF11026.8	gi|289596980|ref|YP_003483676.1|	-	1.4e-29	102.6	4.3	1.5e-29	102.5	4.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2721)
SUR7	PF06687.12	gi|289596980|ref|YP_003483676.1|	-	0.00037	20.2	1.4	0.00048	19.8	1.4	1.2	1	0	0	1	1	1	1	SUR7/PalI	family
TMEM40	PF15817.5	gi|289596980|ref|YP_003483676.1|	-	0.02	14.6	2.2	0.031	14.1	2.2	1.3	1	0	0	1	1	1	0	Transmembrane	protein	40	family
Rax2	PF12768.7	gi|289596980|ref|YP_003483676.1|	-	0.047	13.2	0.1	0.047	13.2	0.1	1.6	2	0	0	2	2	2	0	Cortical	protein	marker	for	cell	polarity
CBS	PF00571.28	gi|289596982|ref|YP_003483678.1|	-	3e-38	130.1	3.3	4.7e-20	71.8	0.3	2.2	2	0	0	2	2	2	2	CBS	domain
IF3_N	PF05198.16	gi|289596982|ref|YP_003483678.1|	-	0.0067	16.7	0.2	2.2	8.6	0.0	2.7	2	1	0	2	2	2	2	Translation	initiation	factor	IF-3,	N-terminal	domain
Peptidase_S29	PF02907.15	gi|289596982|ref|YP_003483678.1|	-	0.022	14.5	0.0	5.8	6.7	0.0	2.2	2	0	0	2	2	2	0	Hepatitis	C	virus	NS3	protease
Binary_toxB_3	PF17476.2	gi|289596982|ref|YP_003483678.1|	-	0.03	14.5	0.0	0.3	11.3	0.0	2.2	2	0	0	2	2	2	0	Clostridial	binary	toxin	B/anthrax	toxin	PA	domain	3
Peptidase_S32	PF05579.13	gi|289596982|ref|YP_003483678.1|	-	0.061	12.5	0.0	3.1	6.9	0.0	2.1	2	0	0	2	2	2	0	Equine	arteritis	virus	serine	endopeptidase	S32
Peptidase_S7	PF00949.21	gi|289596982|ref|YP_003483678.1|	-	0.089	12.6	0.0	0.63	9.9	0.0	2.0	2	0	0	2	2	2	0	Peptidase	S7,	Flavivirus	NS3	serine	protease
Cohesin_HEAT	PF12765.7	gi|289596982|ref|YP_003483678.1|	-	0.11	12.9	0.0	0.78	10.1	0.0	2.1	2	0	0	2	2	2	0	HEAT	repeat	associated	with	sister	chromatid	cohesion
Arc_PepC_II	PF06847.11	gi|289596983|ref|YP_003483679.1|	-	2.4e-15	56.8	1.1	6.1e-15	55.5	0.3	2.1	2	0	0	2	2	2	1	Archaeal	Peptidase	A24	C-terminus	Type	II
DUF423	PF04241.15	gi|289596983|ref|YP_003483679.1|	-	2.5	8.4	5.2	6.5	7.0	0.2	2.7	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF423)
PDDEXK_1	PF12705.7	gi|289596984|ref|YP_003483680.1|	-	4.9e-19	69.2	0.0	7.3e-19	68.7	0.0	1.3	1	1	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
Cas_Cas4	PF01930.17	gi|289596984|ref|YP_003483680.1|	-	4.7e-11	43.1	0.1	3.7e-08	33.6	0.0	2.1	1	1	1	2	2	2	2	Domain	of	unknown	function	DUF83
Phos_pyr_kin	PF08543.12	gi|289596985|ref|YP_003483681.1|	-	1.4e-56	191.7	0.0	1.7e-56	191.4	0.0	1.0	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
PfkB	PF00294.24	gi|289596985|ref|YP_003483681.1|	-	1.1e-07	31.4	0.0	1.4e-07	31.1	0.0	1.1	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Carb_kinase	PF01256.17	gi|289596985|ref|YP_003483681.1|	-	0.00069	19.2	0.0	0.001	18.6	0.0	1.2	1	0	0	1	1	1	1	Carbohydrate	kinase
Ribosomal_L40e	PF01020.17	gi|289596986|ref|YP_003483682.1|	-	1.2e-07	31.5	5.6	1.4e-07	31.3	5.6	1.1	1	0	0	1	1	1	1	Ribosomal	L40e	family
zinc_ribbon_2	PF13240.6	gi|289596986|ref|YP_003483682.1|	-	1.6e-05	24.4	1.4	2.2e-05	24.0	1.4	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-RanBP	PF00641.18	gi|289596986|ref|YP_003483682.1|	-	6.3e-05	22.2	1.9	9.2e-05	21.7	1.9	1.2	1	0	0	1	1	1	1	Zn-finger	in	Ran	binding	protein	and	others
DZR	PF12773.7	gi|289596986|ref|YP_003483682.1|	-	0.00014	21.8	1.0	0.00015	21.7	1.0	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
HypA	PF01155.19	gi|289596986|ref|YP_003483682.1|	-	0.049	13.6	1.1	0.053	13.5	1.1	1.1	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
DNA_RNApol_7kD	PF03604.13	gi|289596986|ref|YP_003483682.1|	-	0.086	12.5	5.9	0.21	11.3	5.9	1.6	1	1	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
DHHC	PF01529.20	gi|289596986|ref|YP_003483682.1|	-	0.12	12.5	2.7	0.14	12.2	2.7	1.1	1	0	0	1	1	1	0	DHHC	palmitoyltransferase
Haem_bd	PF14376.6	gi|289596986|ref|YP_003483682.1|	-	0.16	11.9	0.3	0.16	11.9	0.3	1.4	1	1	1	2	2	2	0	Haem-binding	domain
DUF35_N	PF12172.8	gi|289596986|ref|YP_003483682.1|	-	1	9.3	7.1	42	4.1	7.6	2.2	1	1	1	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
QRPTase_C	PF01729.19	gi|289596987|ref|YP_003483683.1|	-	2.3e-22	79.5	0.0	3e-22	79.2	0.0	1.1	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
Zn-ribbon_8	PF09723.10	gi|289596987|ref|YP_003483683.1|	-	0.00017	21.6	1.0	0.00035	20.6	1.0	1.5	1	0	0	1	1	1	1	Zinc	ribbon	domain
NAPRTase_C	PF17956.1	gi|289596987|ref|YP_003483683.1|	-	0.00037	20.9	0.0	0.00079	19.8	0.0	1.6	1	0	0	1	1	1	1	Nicotinate	phosphoribosyltransferase	C-terminal	domain
HypA	PF01155.19	gi|289596987|ref|YP_003483683.1|	-	0.04	13.9	0.0	0.07	13.2	0.0	1.3	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
DNA_ligase_ZBD	PF03119.16	gi|289596987|ref|YP_003483683.1|	-	0.052	13.6	0.4	0.37	10.9	0.1	2.3	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
NAPRTase_N	PF17767.1	gi|289596987|ref|YP_003483683.1|	-	0.065	13.6	0.0	3.4	8.1	0.0	2.3	1	1	1	2	2	2	0	Nicotinate	phosphoribosyltransferase	(NAPRTase)	N-terminal	domain
DUF2072	PF09845.9	gi|289596987|ref|YP_003483683.1|	-	0.089	13.0	0.4	0.2	11.9	0.4	1.5	1	0	0	1	1	1	0	Zn-ribbon	containing	protein
TF_Zn_Ribbon	PF08271.12	gi|289596987|ref|YP_003483683.1|	-	0.1	12.2	1.6	0.25	10.9	1.6	1.6	1	0	0	1	1	1	0	TFIIB	zinc-binding
zf-RING_7	PF02591.15	gi|289596987|ref|YP_003483683.1|	-	0.12	12.6	0.6	0.54	10.5	0.0	2.3	2	0	0	2	2	2	0	C4-type	zinc	ribbon	domain
DZR	PF12773.7	gi|289596987|ref|YP_003483683.1|	-	0.13	12.3	0.1	0.25	11.4	0.1	1.4	1	0	0	1	1	1	0	Double	zinc	ribbon
HIPIP	PF01355.17	gi|289596987|ref|YP_003483683.1|	-	0.16	12.4	0.2	0.27	11.6	0.2	1.4	1	0	0	1	1	1	0	High	potential	iron-sulfur	protein
zf-C2H2_4	PF13894.6	gi|289596987|ref|YP_003483683.1|	-	4.7	8.3	4.8	7.9	7.6	1.0	2.5	1	1	1	2	2	2	0	C2H2-type	zinc	finger
Isochorismatase	PF00857.20	gi|289596988|ref|YP_003483684.1|	-	1.3e-48	165.5	0.1	1.4e-48	165.4	0.1	1.0	1	0	0	1	1	1	1	Isochorismatase	family
AP2	PF00847.20	gi|289596988|ref|YP_003483684.1|	-	0.11	12.7	0.3	1	9.7	0.1	2.1	2	0	0	2	2	2	0	AP2	domain
DUF296	PF03479.15	gi|289596989|ref|YP_003483685.1|	-	2.3e-18	66.5	0.0	2.6e-18	66.3	0.0	1.1	1	0	0	1	1	1	1	Plants	and	Prokaryotes	Conserved	(PCC)	domain
HI0933_like	PF03486.14	gi|289596989|ref|YP_003483685.1|	-	0.12	11.0	0.0	0.14	10.8	0.0	1.1	1	0	0	1	1	1	0	HI0933-like	protein
DNA_pol_B	PF00136.21	gi|289596990|ref|YP_003483686.1|	-	3e-65	220.7	0.0	5.6e-65	219.8	0.0	1.4	1	1	0	1	1	1	1	DNA	polymerase	family	B
DNA_pol_B_exo1	PF03104.19	gi|289596990|ref|YP_003483686.1|	-	8.1e-22	77.8	2.5	1.6e-19	70.3	2.5	2.9	1	1	0	1	1	1	1	DNA	polymerase	family	B,	exonuclease	domain
RNase_H_2	PF13482.6	gi|289596990|ref|YP_003483686.1|	-	8.9e-07	29.0	0.6	6.9e-06	26.2	0.5	2.5	2	1	0	2	2	2	1	RNase_H	superfamily
DNA_pol_B_exo2	PF10108.9	gi|289596990|ref|YP_003483686.1|	-	4.2e-05	23.3	0.1	0.00013	21.7	0.1	1.8	1	1	0	1	1	1	1	Predicted	3'-5'	exonuclease	related	to	the	exonuclease	domain	of	PolB
DUF1744	PF08490.12	gi|289596990|ref|YP_003483686.1|	-	0.12	10.9	0.0	0.19	10.3	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1744)
DNA_pol_B_2	PF03175.13	gi|289596990|ref|YP_003483686.1|	-	0.13	11.1	2.5	0.39	9.5	0.9	2.5	2	1	0	2	2	2	0	DNA	polymerase	type	B,	organellar	and	viral
T2SSF	PF00482.23	gi|289596991|ref|YP_003483687.1|	-	7.9e-21	74.3	1.1	3.2e-14	52.9	0.3	3.5	4	0	0	4	4	4	2	Type	II	secretion	system	(T2SS),	protein	F
T2SSE	PF00437.20	gi|289596992|ref|YP_003483688.1|	-	3.8e-47	160.6	0.0	5.5e-47	160.1	0.0	1.2	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_29	PF13555.6	gi|289596992|ref|YP_003483688.1|	-	0.00097	18.8	0.0	0.0021	17.8	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.6	gi|289596992|ref|YP_003483688.1|	-	0.011	16.1	0.0	0.022	15.1	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
ABC_tran	PF00005.27	gi|289596992|ref|YP_003483688.1|	-	0.083	13.4	0.0	0.22	12.0	0.0	1.7	1	0	0	1	1	1	0	ABC	transporter
DEAD	PF00270.29	gi|289596992|ref|YP_003483688.1|	-	0.1	12.4	0.0	0.17	11.6	0.0	1.5	1	0	0	1	1	1	0	DEAD/DEAH	box	helicase
AAA_22	PF13401.6	gi|289596992|ref|YP_003483688.1|	-	0.13	12.5	0.0	1.1	9.6	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
AAA_23	PF13476.6	gi|289596992|ref|YP_003483688.1|	-	0.46	11.0	3.1	0.28	11.7	0.4	1.9	2	0	0	2	2	2	0	AAA	domain
ATPase	PF06745.13	gi|289596993|ref|YP_003483689.1|	-	1.4e-15	57.3	0.0	1.6e-15	57.1	0.0	1.1	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.6	gi|289596993|ref|YP_003483689.1|	-	0.00016	21.3	0.1	0.0016	18.0	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
DnaB_C	PF03796.15	gi|289596993|ref|YP_003483689.1|	-	0.00062	19.2	0.0	0.0022	17.4	0.0	1.7	1	1	1	2	2	2	1	DnaB-like	helicase	C	terminal	domain
AAA_16	PF13191.6	gi|289596993|ref|YP_003483689.1|	-	0.0022	18.4	0.1	0.0054	17.1	0.0	1.7	2	0	0	2	2	2	1	AAA	ATPase	domain
Rad51	PF08423.11	gi|289596993|ref|YP_003483689.1|	-	0.0031	16.8	0.5	0.0054	16.0	0.5	1.6	1	1	0	1	1	1	1	Rad51
NACHT	PF05729.12	gi|289596993|ref|YP_003483689.1|	-	0.0048	16.8	0.2	0.012	15.6	0.0	1.6	2	0	0	2	2	2	1	NACHT	domain
AAA_5	PF07728.14	gi|289596993|ref|YP_003483689.1|	-	0.0057	16.7	0.0	0.009	16.0	0.0	1.5	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
ABC_tran	PF00005.27	gi|289596993|ref|YP_003483689.1|	-	0.0078	16.7	0.1	0.014	15.9	0.1	1.4	1	0	0	1	1	1	1	ABC	transporter
PAXNEB	PF05625.11	gi|289596993|ref|YP_003483689.1|	-	0.0088	15.2	0.2	0.095	11.8	0.0	2.0	2	0	0	2	2	2	1	PAXNEB	protein
AAA_22	PF13401.6	gi|289596993|ref|YP_003483689.1|	-	0.019	15.3	0.0	0.03	14.6	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
AAA_23	PF13476.6	gi|289596993|ref|YP_003483689.1|	-	0.021	15.3	0.2	0.067	13.7	0.2	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_29	PF13555.6	gi|289596993|ref|YP_003483689.1|	-	0.027	14.2	0.1	0.051	13.3	0.1	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
RecA	PF00154.21	gi|289596993|ref|YP_003483689.1|	-	0.034	13.6	0.3	0.14	11.6	0.3	2.0	1	1	0	1	1	1	0	recA	bacterial	DNA	recombination	protein
MeaB	PF03308.16	gi|289596993|ref|YP_003483689.1|	-	0.078	11.9	0.0	0.12	11.3	0.0	1.2	1	0	0	1	1	1	0	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
TsaE	PF02367.17	gi|289596993|ref|YP_003483689.1|	-	0.13	12.3	0.0	0.23	11.5	0.0	1.4	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
DUF348	PF03990.14	gi|289596993|ref|YP_003483689.1|	-	0.18	11.6	0.0	0.32	10.8	0.0	1.3	1	0	0	1	1	1	0	G5-linked-Ubiquitin-like	domain
Arch_flagellin	PF01917.16	gi|289596994|ref|YP_003483690.1|	-	4.6e-21	75.7	3.0	6.1e-21	75.3	3.0	1.1	1	0	0	1	1	1	1	Archaebacterial	flagellin
Kelch_6	PF13964.6	gi|289596995|ref|YP_003483691.1|	-	0.54	10.6	2.3	10	6.6	0.2	3.5	3	0	0	3	3	3	0	Kelch	motif
Arch_flagellin	PF01917.16	gi|289596996|ref|YP_003483692.1|	-	4.8e-29	101.7	1.2	5.5e-29	101.5	1.2	1.0	1	0	0	1	1	1	1	Archaebacterial	flagellin
Shisa	PF13908.6	gi|289596996|ref|YP_003483692.1|	-	0.16	12.2	0.0	0.21	11.8	0.0	1.2	1	0	0	1	1	1	0	Wnt	and	FGF	inhibitory	regulator
GHMP_kinases_C	PF08544.13	gi|289596997|ref|YP_003483693.1|	-	7.4e-15	55.1	0.1	1.4e-14	54.2	0.1	1.4	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
GHMP_kinases_N	PF00288.26	gi|289596997|ref|YP_003483693.1|	-	7.3e-14	51.8	0.0	1.5e-13	50.7	0.0	1.6	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GalKase_gal_bdg	PF10509.9	gi|289596997|ref|YP_003483693.1|	-	0.023	14.3	0.0	0.039	13.5	0.0	1.3	1	0	0	1	1	1	0	Galactokinase	galactose-binding	signature
Peptidase_M42	PF05343.14	gi|289596998|ref|YP_003483694.1|	-	9.9e-87	290.6	0.4	1.1e-86	290.4	0.4	1.0	1	0	0	1	1	1	1	M42	glutamyl	aminopeptidase
Peptidase_M20	PF01546.28	gi|289596998|ref|YP_003483694.1|	-	1.8e-06	27.8	0.0	4.6e-06	26.5	0.0	1.7	1	1	0	1	1	1	1	Peptidase	family	M20/M25/M40
Peptidase_M18	PF02127.15	gi|289596998|ref|YP_003483694.1|	-	1.8e-05	23.8	0.1	0.00017	20.6	0.0	2.0	1	1	0	2	2	2	1	Aminopeptidase	I	zinc	metalloprotease	(M18)
Peptidase_M28	PF04389.17	gi|289596998|ref|YP_003483694.1|	-	0.00026	20.8	0.0	0.087	12.5	0.0	2.4	2	1	0	2	2	2	2	Peptidase	family	M28
HTH_20	PF12840.7	gi|289596999|ref|YP_003483695.1|	-	2.4e-05	24.3	0.0	3.4e-05	23.8	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_5	PF01022.20	gi|289596999|ref|YP_003483695.1|	-	0.00016	21.4	0.0	0.00024	20.9	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_11	PF08279.12	gi|289596999|ref|YP_003483695.1|	-	0.00017	21.4	0.0	0.00026	20.9	0.0	1.3	1	0	0	1	1	1	1	HTH	domain
HTH_Crp_2	PF13545.6	gi|289596999|ref|YP_003483695.1|	-	0.0015	18.4	0.0	0.0023	17.9	0.0	1.3	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
DUF3684	PF12449.8	gi|289596999|ref|YP_003483695.1|	-	0.0041	15.0	0.0	0.0047	14.8	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3684)
Mga	PF05043.13	gi|289596999|ref|YP_003483695.1|	-	0.017	15.7	0.0	0.023	15.3	0.0	1.3	1	0	0	1	1	1	0	Mga	helix-turn-helix	domain
TrmB	PF01978.19	gi|289596999|ref|YP_003483695.1|	-	0.024	14.5	0.0	0.041	13.8	0.0	1.3	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_DeoR	PF08220.12	gi|289596999|ref|YP_003483695.1|	-	0.025	14.3	0.0	0.044	13.5	0.0	1.4	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
HTH_27	PF13463.6	gi|289596999|ref|YP_003483695.1|	-	0.032	14.7	0.0	0.077	13.5	0.0	1.6	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
HTH_43	PF09904.9	gi|289596999|ref|YP_003483695.1|	-	0.043	13.8	0.0	0.076	13.0	0.0	1.4	1	0	0	1	1	1	0	Winged	helix-turn	helix
HTH_IclR	PF09339.10	gi|289596999|ref|YP_003483695.1|	-	0.064	13.1	0.0	0.1	12.4	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_7	PF02796.15	gi|289596999|ref|YP_003483695.1|	-	0.13	12.4	0.1	0.29	11.3	0.1	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	resolvase
LigT_PEase	PF02834.16	gi|289597001|ref|YP_003483697.1|	-	1e-23	83.3	0.0	3e-15	56.2	0.0	2.2	2	0	0	2	2	2	2	LigT	like	Phosphoesterase
2_5_RNA_ligase2	PF13563.6	gi|289597001|ref|YP_003483697.1|	-	1.1e-14	54.7	0.0	1.3e-14	54.4	0.0	1.1	1	0	0	1	1	1	1	2'-5'	RNA	ligase	superfamily
AKAP7_NLS	PF10469.9	gi|289597001|ref|YP_003483697.1|	-	8.5e-10	38.9	0.0	1.7e-09	37.9	0.0	1.5	1	1	0	1	1	1	1	AKAP7	2'5'	RNA	ligase-like	domain
HVSL	PF09749.9	gi|289597001|ref|YP_003483697.1|	-	0.11	11.9	0.0	0.14	11.6	0.0	1.3	1	0	0	1	1	1	0	Uncharacterised	conserved	protein
GCV_H	PF01597.19	gi|289597002|ref|YP_003483698.1|	-	1.3e-44	151.0	4.5	1.4e-44	150.9	4.5	1.0	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
RnfC_N	PF13375.6	gi|289597002|ref|YP_003483698.1|	-	8.7e-06	25.6	0.1	1.1e-05	25.3	0.1	1.3	1	0	0	1	1	1	1	RnfC	Barrel	sandwich	hybrid	domain
Biotin_lipoyl	PF00364.22	gi|289597002|ref|YP_003483698.1|	-	2.8e-05	23.9	1.5	0.00017	21.4	0.7	2.1	1	1	1	2	2	2	1	Biotin-requiring	enzyme
PTS_EIIA_1	PF00358.20	gi|289597002|ref|YP_003483698.1|	-	0.1	12.4	0.2	0.16	11.7	0.2	1.3	1	0	0	1	1	1	0	phosphoenolpyruvate-dependent	sugar	phosphotransferase	system,	EIIA	1
FtsJ	PF01728.19	gi|289597003|ref|YP_003483699.1|	-	8.7e-55	185.6	0.0	9.8e-55	185.4	0.0	1.0	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
Methyltransf_31	PF13847.6	gi|289597003|ref|YP_003483699.1|	-	1.3e-06	28.3	0.1	0.0039	17.0	0.0	2.6	1	1	0	2	2	2	2	Methyltransferase	domain
Methyltransf_25	PF13649.6	gi|289597003|ref|YP_003483699.1|	-	2.2e-06	28.3	0.1	0.0065	17.1	0.0	2.7	1	1	1	2	2	2	2	Methyltransferase	domain
Methyltr_RsmB-F	PF01189.17	gi|289597003|ref|YP_003483699.1|	-	0.00047	19.9	0.0	0.00098	18.8	0.0	1.6	2	0	0	2	2	2	1	16S	rRNA	methyltransferase	RsmB/F
Fibrillarin	PF01269.17	gi|289597003|ref|YP_003483699.1|	-	0.0018	17.4	0.1	0.003	16.7	0.1	1.5	1	1	0	1	1	1	1	Fibrillarin
Methyltransf_23	PF13489.6	gi|289597003|ref|YP_003483699.1|	-	0.01	15.7	0.0	0.013	15.4	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|289597003|ref|YP_003483699.1|	-	0.035	13.4	0.0	0.76	9.1	0.0	2.1	1	1	1	2	2	2	0	ubiE/COQ5	methyltransferase	family
PCMT	PF01135.19	gi|289597003|ref|YP_003483699.1|	-	0.067	12.9	0.0	0.1	12.4	0.0	1.4	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
TraB	PF01963.17	gi|289597004|ref|YP_003483700.1|	-	0.11	12.4	0.0	0.32	10.8	0.0	1.9	2	0	0	2	2	2	0	TraB	family
HTH_3	PF01381.22	gi|289597005|ref|YP_003483701.1|	-	1.3e-10	41.1	0.4	3.2e-10	39.9	0.4	1.7	1	0	0	1	1	1	1	Helix-turn-helix
HTH_31	PF13560.6	gi|289597005|ref|YP_003483701.1|	-	6.6e-06	26.4	0.2	1.7e-05	25.0	0.2	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_19	PF12844.7	gi|289597005|ref|YP_003483701.1|	-	2.8e-05	24.0	0.1	2.8e-05	24.0	0.1	2.9	3	0	0	3	3	3	1	Helix-turn-helix	domain
HTH_25	PF13413.6	gi|289597005|ref|YP_003483701.1|	-	0.00028	20.7	0.9	0.00072	19.4	0.2	2.1	2	0	0	2	2	2	1	Helix-turn-helix	domain
MerR	PF00376.23	gi|289597005|ref|YP_003483701.1|	-	0.0051	16.6	0.4	0.084	12.7	0.0	2.5	2	0	0	2	2	2	1	MerR	family	regulatory	protein
HTH_11	PF08279.12	gi|289597005|ref|YP_003483701.1|	-	0.014	15.3	0.1	0.055	13.4	0.1	2.0	1	0	0	1	1	1	0	HTH	domain
MerR_1	PF13411.6	gi|289597005|ref|YP_003483701.1|	-	0.026	14.6	0.1	0.21	11.7	0.0	2.5	3	0	0	3	3	3	0	MerR	HTH	family	regulatory	protein
PRK	PF00485.18	gi|289597006|ref|YP_003483702.1|	-	6.7e-48	163.0	0.1	1.2e-47	162.3	0.1	1.3	1	0	0	1	1	1	1	Phosphoribulokinase	/	Uridine	kinase	family
ABC_tran	PF00005.27	gi|289597006|ref|YP_003483702.1|	-	0.0014	19.2	0.0	0.002	18.6	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_18	PF13238.6	gi|289597006|ref|YP_003483702.1|	-	0.0031	18.1	0.1	0.0063	17.1	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
TsaE	PF02367.17	gi|289597006|ref|YP_003483702.1|	-	0.012	15.7	0.0	0.028	14.4	0.0	1.6	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
AAA_29	PF13555.6	gi|289597006|ref|YP_003483702.1|	-	0.017	14.8	0.1	0.03	14.0	0.1	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
RNA_helicase	PF00910.22	gi|289597006|ref|YP_003483702.1|	-	0.061	13.7	0.0	0.15	12.5	0.0	1.8	1	0	0	1	1	1	0	RNA	helicase
NB-ARC	PF00931.22	gi|289597006|ref|YP_003483702.1|	-	0.073	12.2	0.0	0.12	11.5	0.0	1.4	1	0	0	1	1	1	0	NB-ARC	domain
NACHT	PF05729.12	gi|289597006|ref|YP_003483702.1|	-	0.074	13.0	0.0	0.12	12.3	0.0	1.3	1	0	0	1	1	1	0	NACHT	domain
Cytidylate_kin	PF02224.18	gi|289597006|ref|YP_003483702.1|	-	0.11	12.2	0.9	8.4	6.1	0.1	2.2	2	0	0	2	2	2	0	Cytidylate	kinase
AAA_16	PF13191.6	gi|289597006|ref|YP_003483702.1|	-	0.14	12.5	0.0	0.22	11.9	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_33	PF13671.6	gi|289597006|ref|YP_003483702.1|	-	0.18	11.9	0.0	0.3	11.2	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
DUF87	PF01935.17	gi|289597006|ref|YP_003483702.1|	-	0.21	11.6	3.1	0.55	10.3	3.1	1.9	1	1	0	1	1	1	0	Helicase	HerA,	central	domain
TaqI_C	PF12950.7	gi|289597007|ref|YP_003483703.1|	-	1.4e-41	141.3	2.2	6.6e-41	139.2	0.4	2.6	2	0	0	2	2	2	1	TaqI-like	C-terminal	specificity	domain
Eco57I	PF07669.11	gi|289597007|ref|YP_003483703.1|	-	8.3e-18	64.8	1.6	3.9e-17	62.7	0.1	2.8	3	0	0	3	3	3	1	Eco57I	restriction-modification	methylase
N6_Mtase	PF02384.16	gi|289597007|ref|YP_003483703.1|	-	2e-16	60.2	0.1	1.3e-09	37.8	0.0	2.7	2	1	0	2	2	2	2	N-6	DNA	Methylase
HSDR_N	PF04313.14	gi|289597007|ref|YP_003483703.1|	-	1.1e-08	35.2	0.0	5.4e-06	26.5	0.0	2.8	1	1	0	1	1	1	1	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
HSDR_N_2	PF13588.6	gi|289597007|ref|YP_003483703.1|	-	3.5e-07	30.2	0.0	1.8e-06	27.9	0.0	2.3	1	1	0	1	1	1	1	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
UPF0020	PF01170.18	gi|289597007|ref|YP_003483703.1|	-	0.00064	19.5	0.0	0.38	10.4	0.0	2.5	1	1	0	2	2	2	2	Putative	RNA	methylase	family	UPF0020
Methyltransf_31	PF13847.6	gi|289597007|ref|YP_003483703.1|	-	0.035	13.9	0.0	23	4.7	0.0	3.2	3	0	0	3	3	3	0	Methyltransferase	domain
MTS	PF05175.14	gi|289597007|ref|YP_003483703.1|	-	0.13	11.8	0.0	7.2	6.1	0.0	3.4	3	1	0	3	3	3	0	Methyltransferase	small	domain
NosD	PF05048.13	gi|289597008|ref|YP_003483704.1|	-	4.5e-94	314.2	174.7	2.9e-18	66.0	24.9	7.4	1	1	6	7	7	7	7	Periplasmic	copper-binding	protein	(NosD)
Beta_helix	PF13229.6	gi|289597008|ref|YP_003483704.1|	-	7.1e-91	302.2	222.2	1.3e-22	80.3	32.8	7.2	2	2	4	7	7	7	7	Right	handed	beta	helix	region
Pectate_lyase_3	PF12708.7	gi|289597008|ref|YP_003483704.1|	-	0.079	12.8	98.6	0.3	10.9	6.0	8.9	1	1	10	12	12	12	0	Pectate	lyase	superfamily	protein
NERD	PF08378.11	gi|289597009|ref|YP_003483705.1|	-	8.6e-19	68.0	0.0	1.5e-18	67.2	0.0	1.4	1	0	0	1	1	1	1	Nuclease-related	domain
FixQ	PF05545.11	gi|289597009|ref|YP_003483705.1|	-	0.0077	16.2	0.5	0.017	15.1	0.5	1.6	1	0	0	1	1	1	1	Cbb3-type	cytochrome	oxidase	component	FixQ
zinc_ribbon_15	PF17032.5	gi|289597009|ref|YP_003483705.1|	-	0.098	13.4	0.1	0.17	12.7	0.1	1.3	1	0	0	1	1	1	0	zinc-ribbon	family
DUF4131	PF13567.6	gi|289597009|ref|YP_003483705.1|	-	0.15	11.7	0.1	1.4	8.6	0.2	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4131)
DUF2207	PF09972.9	gi|289597009|ref|YP_003483705.1|	-	0.15	10.8	0.7	0.21	10.3	0.7	1.2	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
CN_hydrolase	PF00795.22	gi|289597010|ref|YP_003483706.1|	-	2.8e-38	131.7	0.0	4.4e-38	131.1	0.0	1.3	1	1	0	1	1	1	1	Carbon-nitrogen	hydrolase
BPL_N	PF09825.9	gi|289597011|ref|YP_003483707.1|	-	4.8e-18	65.4	1.2	1.1e-17	64.2	1.2	1.6	1	1	0	1	1	1	1	Biotin-protein	ligase,	N	terminal
DJ-1_PfpI	PF01965.24	gi|289597011|ref|YP_003483707.1|	-	0.00095	19.0	0.0	0.0014	18.4	0.0	1.2	1	0	0	1	1	1	1	DJ-1/PfpI	family
Peptidase_S51	PF03575.17	gi|289597011|ref|YP_003483707.1|	-	0.0016	18.1	0.0	0.0029	17.3	0.0	1.4	1	0	0	1	1	1	1	Peptidase	family	S51
GATase_3	PF07685.14	gi|289597011|ref|YP_003483707.1|	-	0.015	14.9	0.0	0.026	14.1	0.0	1.3	1	0	0	1	1	1	0	CobB/CobQ-like	glutamine	amidotransferase	domain
ThuA	PF06283.11	gi|289597011|ref|YP_003483707.1|	-	0.021	15.1	0.0	0.12	12.6	0.0	1.9	1	1	0	1	1	1	0	Trehalose	utilisation
DUF4535	PF15054.6	gi|289597011|ref|YP_003483707.1|	-	0.8	9.5	3.2	1.2	8.9	1.6	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4535)
ABC_tran	PF00005.27	gi|289597012|ref|YP_003483708.1|	-	1.4e-26	93.6	0.1	3.3e-26	92.4	0.1	1.6	1	1	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.12	gi|289597012|ref|YP_003483708.1|	-	1.8e-18	66.8	0.3	3.7e-18	65.8	0.3	1.5	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
SMC_N	PF02463.19	gi|289597012|ref|YP_003483708.1|	-	0.0001	21.8	4.8	0.0012	18.3	4.8	2.0	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_21	PF13304.6	gi|289597012|ref|YP_003483708.1|	-	0.00051	19.9	1.9	0.0021	17.9	0.1	2.1	1	1	0	2	2	2	1	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_29	PF13555.6	gi|289597012|ref|YP_003483708.1|	-	0.022	14.5	0.1	0.039	13.7	0.1	1.3	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
DUF3987	PF13148.6	gi|289597012|ref|YP_003483708.1|	-	0.047	12.7	0.0	0.08	11.9	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3987)
AAA_23	PF13476.6	gi|289597012|ref|YP_003483708.1|	-	0.049	14.1	4.2	3.6	8.0	0.2	2.3	2	0	0	2	2	2	0	AAA	domain
TrwB_AAD_bind	PF10412.9	gi|289597012|ref|YP_003483708.1|	-	0.053	12.4	0.0	0.074	11.9	0.0	1.2	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
Methyltransf_28	PF02636.17	gi|289597012|ref|YP_003483708.1|	-	0.065	12.8	0.0	0.1	12.2	0.0	1.2	1	0	0	1	1	1	0	Putative	S-adenosyl-L-methionine-dependent	methyltransferase
AAA_15	PF13175.6	gi|289597012|ref|YP_003483708.1|	-	0.072	12.8	3.9	0.13	11.9	3.9	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
DUF87	PF01935.17	gi|289597012|ref|YP_003483708.1|	-	0.079	13.0	7.9	0.095	12.8	0.2	2.8	1	1	2	3	3	3	0	Helicase	HerA,	central	domain
ResIII	PF04851.15	gi|289597012|ref|YP_003483708.1|	-	0.1	12.6	0.1	0.14	12.1	0.1	1.3	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
STAS	PF01740.21	gi|289597012|ref|YP_003483708.1|	-	0.15	11.7	0.8	1.8	8.2	0.8	2.6	1	1	0	1	1	1	0	STAS	domain
SbcCD_C	PF13558.6	gi|289597012|ref|YP_003483708.1|	-	0.17	12.1	0.1	2	8.7	0.1	2.2	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_22	PF13401.6	gi|289597012|ref|YP_003483708.1|	-	1.3	9.3	4.5	23	5.3	4.5	2.4	1	1	0	1	1	1	0	AAA	domain
ABC_tran	PF00005.27	gi|289597013|ref|YP_003483709.1|	-	3.9e-28	98.7	0.0	5.2e-28	98.3	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.12	gi|289597013|ref|YP_003483709.1|	-	4.7e-18	65.5	0.2	8.2e-18	64.7	0.2	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.6	gi|289597013|ref|YP_003483709.1|	-	8.3e-05	22.5	0.9	0.00033	20.6	0.1	2.0	1	1	0	2	2	2	1	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|289597013|ref|YP_003483709.1|	-	0.0011	18.5	1.7	0.0026	17.2	1.7	1.6	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
Peptidase_C24	PF03510.14	gi|289597013|ref|YP_003483709.1|	-	0.017	15.6	0.0	0.033	14.7	0.0	1.4	1	0	0	1	1	1	0	2C	endopeptidase	(C24)	cysteine	protease	family
TniB	PF05621.11	gi|289597013|ref|YP_003483709.1|	-	0.061	12.7	0.1	0.32	10.4	0.0	1.9	2	0	0	2	2	2	0	Bacterial	TniB	protein
AAA_22	PF13401.6	gi|289597013|ref|YP_003483709.1|	-	0.071	13.4	0.6	0.51	10.6	0.6	2.0	1	1	0	1	1	1	0	AAA	domain
ATP-synt_ab	PF00006.25	gi|289597013|ref|YP_003483709.1|	-	0.099	12.3	0.1	0.16	11.6	0.1	1.5	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
BPD_transp_1	PF00528.22	gi|289597014|ref|YP_003483710.1|	-	1.2e-30	106.6	15.4	1.2e-30	106.6	15.4	2.3	3	0	0	3	3	3	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.7	gi|289597014|ref|YP_003483710.1|	-	1e-05	25.4	0.2	1e-05	25.4	0.2	3.7	4	0	0	4	4	4	1	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
BPD_transp_1	PF00528.22	gi|289597015|ref|YP_003483711.1|	-	2.8e-38	131.5	16.4	2.8e-38	131.5	16.4	2.3	3	0	0	3	3	3	1	Binding-protein-dependent	transport	system	inner	membrane	component
SBP_bac_5	PF00496.22	gi|289597016|ref|YP_003483712.1|	-	3.7e-71	240.1	10.9	5.1e-71	239.6	10.9	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
Pilin_N	PF07790.11	gi|289597016|ref|YP_003483712.1|	-	0.052	14.5	0.4	0.26	12.2	0.3	2.2	2	0	0	2	2	2	0	Archaeal	Type	IV	pilin,	N-terminal
AFOR_C	PF01314.18	gi|289597017|ref|YP_003483713.1|	-	6.4e-137	456.6	0.1	8.1e-137	456.3	0.1	1.1	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	domains	2	&	3
AFOR_N	PF02730.15	gi|289597017|ref|YP_003483713.1|	-	1.3e-72	243.8	0.0	1.9e-72	243.3	0.0	1.3	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
SHOCT	PF09851.9	gi|289597017|ref|YP_003483713.1|	-	5.8	6.8	8.8	0.86	9.4	0.6	3.1	3	0	0	3	3	3	0	Short	C-terminal	domain
Aminotran_3	PF00202.21	gi|289597018|ref|YP_003483714.1|	-	2e-120	402.2	0.0	2.3e-120	402.0	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
KID	PF02524.14	gi|289597018|ref|YP_003483714.1|	-	0.021	14.8	2.5	5.5	7.5	0.1	3.0	2	0	0	2	2	2	0	KID	repeat
Gemini_AC4_5_2	PF08464.10	gi|289597018|ref|YP_003483714.1|	-	1.4	8.9	3.2	28	4.7	0.1	3.0	4	0	0	4	4	4	0	Geminivirus	AC4/5	conserved	region
DUF61	PF01886.16	gi|289597019|ref|YP_003483715.1|	-	2e-11	44.0	0.1	2.2e-11	43.9	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF61
DUF2680	PF10925.8	gi|289597019|ref|YP_003483715.1|	-	0.2	11.7	1.1	0.46	10.5	1.1	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2680)
SOR_SNZ	PF01680.17	gi|289597020|ref|YP_003483716.1|	-	1.6e-100	335.1	6.1	1.9e-98	328.3	4.9	2.3	2	0	0	2	2	2	2	SOR/SNZ	family
ThiG	PF05690.14	gi|289597020|ref|YP_003483716.1|	-	2.9e-10	39.9	5.6	4.3e-07	29.5	0.1	2.5	2	1	0	2	2	2	2	Thiazole	biosynthesis	protein	ThiG
Dus	PF01207.17	gi|289597020|ref|YP_003483716.1|	-	3.2e-06	26.5	1.7	0.0044	16.2	0.0	2.5	3	0	0	3	3	3	2	Dihydrouridine	synthase	(Dus)
NanE	PF04131.14	gi|289597020|ref|YP_003483716.1|	-	0.001	18.3	0.9	0.021	14.0	0.0	2.5	2	1	0	2	2	2	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
NMO	PF03060.15	gi|289597020|ref|YP_003483716.1|	-	0.0026	17.2	5.7	0.012	15.0	0.0	2.6	2	1	0	2	2	2	1	Nitronate	monooxygenase
FMN_dh	PF01070.18	gi|289597020|ref|YP_003483716.1|	-	0.0073	15.4	0.2	0.23	10.5	0.0	2.2	2	0	0	2	2	2	1	FMN-dependent	dehydrogenase
His_biosynth	PF00977.21	gi|289597020|ref|YP_003483716.1|	-	0.012	15.1	0.2	0.68	9.4	0.0	2.6	2	1	0	2	2	2	0	Histidine	biosynthesis	protein
Trp_syntA	PF00290.20	gi|289597020|ref|YP_003483716.1|	-	0.019	13.8	0.0	0.047	12.5	0.0	1.6	2	0	0	2	2	2	0	Tryptophan	synthase	alpha	chain
IGPS	PF00218.21	gi|289597020|ref|YP_003483716.1|	-	0.019	14.1	0.1	0.28	10.3	0.0	2.5	2	1	0	2	2	2	0	Indole-3-glycerol	phosphate	synthase
TetR_C_27	PF17935.1	gi|289597020|ref|YP_003483716.1|	-	0.026	14.6	0.0	0.076	13.1	0.0	1.7	1	0	0	1	1	1	0	Tetracyclin	repressor-like,	C-terminal	domain
DUF561	PF04481.12	gi|289597020|ref|YP_003483716.1|	-	0.044	13.0	0.0	1.4	8.1	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF561)
Peptidase_S66C	PF17676.1	gi|289597020|ref|YP_003483716.1|	-	0.062	13.8	0.0	0.19	12.3	0.0	1.8	1	0	0	1	1	1	0	LD-carboxypeptidase	C-terminal	domain
DUF3198	PF11433.8	gi|289597020|ref|YP_003483716.1|	-	0.26	11.2	1.0	0.76	9.7	1.0	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3198)
GrpE	PF01025.19	gi|289597021|ref|YP_003483717.1|	-	1.6e-39	135.2	4.6	1.9e-39	135.0	4.6	1.0	1	0	0	1	1	1	1	GrpE
DUF1351	PF07083.11	gi|289597021|ref|YP_003483717.1|	-	0.16	11.7	7.7	0.35	10.6	7.6	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1351)
HSP70	PF00012.20	gi|289597022|ref|YP_003483718.1|	-	1.3e-223	743.6	12.2	7.1e-221	734.5	12.2	2.0	1	1	0	1	1	1	1	Hsp70	protein
MreB_Mbl	PF06723.13	gi|289597022|ref|YP_003483718.1|	-	3.1e-21	75.6	6.8	3.1e-21	75.6	6.8	2.7	2	1	0	2	2	2	1	MreB/Mbl	protein
FGGY_C	PF02782.16	gi|289597022|ref|YP_003483718.1|	-	0.00011	22.0	0.0	0.00022	21.0	0.0	1.5	1	0	0	1	1	1	1	FGGY	family	of	carbohydrate	kinases,	C-terminal	domain
FtsA	PF14450.6	gi|289597022|ref|YP_003483718.1|	-	0.059	13.8	13.2	4.8	7.7	0.7	4.6	3	2	0	3	3	3	0	Cell	division	protein	FtsA
LMBR1	PF04791.16	gi|289597022|ref|YP_003483718.1|	-	3.5	6.4	6.2	5.1	5.9	6.2	1.1	1	0	0	1	1	1	0	LMBR1-like	membrane	protein
Chrome_Resist	PF09828.9	gi|289597023|ref|YP_003483719.1|	-	2.4e-47	160.7	0.0	2.7e-47	160.5	0.0	1.0	1	0	0	1	1	1	1	Chromate	resistance	exported	protein
DnaJ_C	PF01556.18	gi|289597024|ref|YP_003483720.1|	-	1.5e-30	106.2	0.4	2.1e-30	105.8	0.4	1.2	1	0	0	1	1	1	1	DnaJ	C	terminal	domain
DnaJ	PF00226.31	gi|289597024|ref|YP_003483720.1|	-	4.2e-29	100.5	4.7	7e-29	99.7	4.7	1.4	1	0	0	1	1	1	1	DnaJ	domain
DnaJ_CXXCXGXG	PF00684.19	gi|289597024|ref|YP_003483720.1|	-	3.5e-15	56.1	13.1	5.8e-15	55.4	13.1	1.4	1	0	0	1	1	1	1	DnaJ	central	domain
Anti-TRAP	PF15777.5	gi|289597024|ref|YP_003483720.1|	-	1.4e-07	31.4	13.5	0.00029	20.8	2.6	2.5	2	0	0	2	2	2	2	Tryptophan	RNA-binding	attenuator	protein	inhibitory	protein
Cytochrome_C7	PF14522.6	gi|289597024|ref|YP_003483720.1|	-	0.023	14.7	3.4	0.081	12.9	3.4	1.9	1	1	0	1	1	1	0	Cytochrome	c7	and	related	cytochrome	c
RPT	PF13446.6	gi|289597024|ref|YP_003483720.1|	-	0.2	11.6	0.1	0.36	10.8	0.1	1.4	1	0	0	1	1	1	0	A	repeated	domain	in	UCH-protein
Cytochrom_c3_2	PF14537.6	gi|289597024|ref|YP_003483720.1|	-	0.38	11.2	2.8	1.5	9.3	2.7	1.9	1	1	0	1	1	1	0	Cytochrome	c3
zf_Rg	PF17915.1	gi|289597024|ref|YP_003483720.1|	-	0.62	9.5	5.2	18	4.8	0.1	3.4	3	0	0	3	3	3	0	Reverse	gyrase	zinc	finger
DUF5351	PF17302.2	gi|289597024|ref|YP_003483720.1|	-	0.76	10.0	23.0	7.3	6.9	0.8	4.4	4	0	0	4	4	4	0	Family	of	unknown	function	(DUF5351)
DUF3797	PF12677.7	gi|289597024|ref|YP_003483720.1|	-	0.81	9.6	3.1	3.1	7.7	0.0	3.0	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF3797)
DZR	PF12773.7	gi|289597024|ref|YP_003483720.1|	-	1	9.4	7.2	4.8	7.3	7.5	1.9	1	1	1	2	2	2	0	Double	zinc	ribbon
FdhE	PF04216.12	gi|289597024|ref|YP_003483720.1|	-	2.6	7.9	8.6	3.2	7.6	6.5	1.9	1	1	1	2	2	2	0	Protein	involved	in	formate	dehydrogenase	formation
TackOD1	PF18551.1	gi|289597024|ref|YP_003483720.1|	-	2.8	7.6	5.2	19	4.9	0.9	2.3	1	1	0	2	2	2	0	Thaumarchaeal	output	domain	1
Cytochrome_C554	PF13435.6	gi|289597024|ref|YP_003483720.1|	-	3.6	8.6	5.6	40	5.2	0.1	2.7	3	0	0	3	3	2	0	Cytochrome	c554	and	c-prime
DUF2070	PF09843.9	gi|289597025|ref|YP_003483721.1|	-	0.22	9.7	19.4	0.25	9.6	19.4	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2070)
HTH_34	PF13601.6	gi|289597026|ref|YP_003483722.1|	-	6.7e-20	71.1	0.0	7.9e-20	70.8	0.0	1.1	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_20	PF12840.7	gi|289597026|ref|YP_003483722.1|	-	8.3e-08	32.2	0.0	1.3e-07	31.5	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_5	PF01022.20	gi|289597026|ref|YP_003483722.1|	-	1.1e-07	31.6	0.0	4.3e-07	29.7	0.0	1.9	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.6	gi|289597026|ref|YP_003483722.1|	-	0.00071	19.1	0.0	0.0015	18.1	0.0	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.7	gi|289597026|ref|YP_003483722.1|	-	0.00081	19.2	0.0	0.0019	18.1	0.0	1.6	2	0	0	2	2	2	1	MarR	family
HxlR	PF01638.17	gi|289597026|ref|YP_003483722.1|	-	0.001	18.9	0.1	0.0013	18.5	0.1	1.1	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
PadR	PF03551.14	gi|289597026|ref|YP_003483722.1|	-	0.0017	18.3	0.0	0.0024	17.8	0.0	1.2	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_27	PF13463.6	gi|289597026|ref|YP_003483722.1|	-	0.074	13.6	0.0	0.1	13.1	0.0	1.2	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
LexA_DNA_bind	PF01726.16	gi|289597026|ref|YP_003483722.1|	-	0.077	12.8	0.0	0.32	10.8	0.0	2.0	2	0	0	2	2	2	0	LexA	DNA	binding	domain
DUF2774	PF11242.8	gi|289597026|ref|YP_003483722.1|	-	0.092	13.0	0.0	2.1	8.6	0.0	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2774)
CitMHS	PF03600.16	gi|289597028|ref|YP_003483724.1|	-	1.2e-20	74.0	27.9	1.2e-20	74.0	27.9	1.9	1	1	1	2	2	2	1	Citrate	transporter
CitMHS_2	PF16980.5	gi|289597028|ref|YP_003483724.1|	-	0.00011	21.0	20.9	0.00011	21.0	20.9	2.2	1	1	1	2	2	2	1	Putative	citrate	transport
Aldolase_II	PF00596.21	gi|289597029|ref|YP_003483725.1|	-	1.7e-32	112.9	0.1	1.9e-32	112.7	0.1	1.0	1	0	0	1	1	1	1	Class	II	Aldolase	and	Adducin	N-terminal	domain
Promethin	PF16015.5	gi|289597030|ref|YP_003483726.1|	-	0.19	11.6	9.2	0.11	12.5	1.7	2.1	2	0	0	2	2	2	0	Promethin
HBM	PF16591.5	gi|289597031|ref|YP_003483727.1|	-	0.00036	20.1	9.9	0.00036	20.1	9.9	2.6	1	1	2	3	3	3	1	Helical	bimodular	sensor	domain
DUF948	PF06103.11	gi|289597031|ref|YP_003483727.1|	-	0.0004	20.6	6.9	0.026	14.8	1.0	2.6	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF948)
CHIP_TPR_N	PF18391.1	gi|289597031|ref|YP_003483727.1|	-	0.014	16.1	12.7	0.014	16.1	12.7	4.2	3	2	0	3	3	3	0	CHIP	N-terminal	tetratricopeptide	repeat	domain
LEDGF	PF11467.8	gi|289597031|ref|YP_003483727.1|	-	0.02	14.5	1.6	0.02	14.5	1.6	3.5	2	1	0	3	3	3	0	Lens	epithelium-derived	growth	factor	(LEDGF)
Sec34	PF04136.15	gi|289597031|ref|YP_003483727.1|	-	0.03	14.2	21.3	0.2	11.5	7.9	2.9	2	1	1	3	3	3	0	Sec34-like	family
DUF2937	PF11157.8	gi|289597031|ref|YP_003483727.1|	-	0.23	11.1	8.7	1.5	8.5	3.3	2.5	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2937)
Syntaxin_2	PF14523.6	gi|289597031|ref|YP_003483727.1|	-	1.3	9.5	27.8	2.7	8.4	8.1	3.8	1	1	2	3	3	3	0	Syntaxin-like	protein
T3SSipB	PF16535.5	gi|289597031|ref|YP_003483727.1|	-	1.8	9.1	21.5	3.9	7.9	9.6	2.4	2	0	0	2	2	2	0	Type	III	cell	invasion	protein	SipB
Occludin_ELL	PF07303.13	gi|289597031|ref|YP_003483727.1|	-	2.5	8.9	40.4	1.5	9.6	2.6	4.2	1	1	3	5	5	5	0	Occludin	homology	domain
ApoO	PF09769.9	gi|289597031|ref|YP_003483727.1|	-	2.6	8.0	7.1	1.4	8.9	1.1	2.5	2	0	0	2	2	2	0	Apolipoprotein	O
HTH_42	PF06224.12	gi|289597031|ref|YP_003483727.1|	-	2.9	7.3	12.8	0.24	10.9	0.3	2.8	1	1	2	3	3	3	0	Winged	helix	DNA-binding	domain
FUSC	PF04632.12	gi|289597031|ref|YP_003483727.1|	-	3.4	6.1	12.0	1.2	7.6	3.1	2.1	2	0	0	2	2	2	0	Fusaric	acid	resistance	protein	family
Seryl_tRNA_N	PF02403.22	gi|289597031|ref|YP_003483727.1|	-	3.4	7.9	59.1	0.34	11.1	18.1	4.1	1	1	3	4	4	4	0	Seryl-tRNA	synthetase	N-terminal	domain
DUF3450	PF11932.8	gi|289597031|ref|YP_003483727.1|	-	5.7	6.2	31.3	0.46	9.7	7.3	3.0	2	1	0	3	3	3	0	Protein	of	unknown	function	(DUF3450)
Spc7	PF08317.11	gi|289597031|ref|YP_003483727.1|	-	6.1	5.6	58.4	0.6	8.9	24.0	2.9	1	1	2	3	3	3	0	Spc7	kinetochore	protein
MCPsignal	PF00015.21	gi|289597031|ref|YP_003483727.1|	-	7.1	6.4	11.8	2.3	8.0	2.2	2.8	2	1	0	2	2	2	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
Lactamase_B_3	PF13483.6	gi|289597032|ref|YP_003483728.1|	-	2.7e-05	24.1	0.0	3.8e-05	23.6	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.7	gi|289597032|ref|YP_003483728.1|	-	0.00014	21.4	0.0	0.0002	20.9	0.0	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
B12-binding	PF02310.19	gi|289597033|ref|YP_003483729.1|	-	5.3e-26	91.0	0.1	6.5e-26	90.8	0.1	1.0	1	0	0	1	1	1	1	B12	binding	domain
QRPTase_C	PF01729.19	gi|289597033|ref|YP_003483729.1|	-	0.034	13.9	0.0	0.04	13.7	0.0	1.1	1	0	0	1	1	1	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
Nitro_FeMo-Co	PF02579.17	gi|289597033|ref|YP_003483729.1|	-	0.044	14.1	0.2	6.1	7.2	0.0	2.3	2	0	0	2	2	2	0	Dinitrogenase	iron-molybdenum	cofactor
MeaB	PF03308.16	gi|289597034|ref|YP_003483730.1|	-	1.5e-67	227.4	0.1	2.1e-67	226.9	0.1	1.1	1	0	0	1	1	1	1	Methylmalonyl	Co-A	mutase-associated	GTPase	MeaB
cobW	PF02492.19	gi|289597034|ref|YP_003483730.1|	-	1.4e-07	31.3	2.0	2.5e-07	30.5	0.8	2.0	2	1	0	2	2	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
NTPase_1	PF03266.15	gi|289597034|ref|YP_003483730.1|	-	2.5e-05	24.2	0.5	0.00011	22.2	0.1	2.2	2	0	0	2	2	2	1	NTPase
AAA_29	PF13555.6	gi|289597034|ref|YP_003483730.1|	-	4.2e-05	23.2	0.0	7.6e-05	22.4	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.6	gi|289597034|ref|YP_003483730.1|	-	0.0002	21.6	0.0	0.00051	20.3	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.6	gi|289597034|ref|YP_003483730.1|	-	0.00091	19.7	0.1	0.0018	18.7	0.1	1.4	1	0	0	1	1	1	1	AAA	ATPase	domain
ATP_bind_1	PF03029.17	gi|289597034|ref|YP_003483730.1|	-	0.00098	19.0	0.3	0.0023	17.7	0.0	1.7	2	0	0	2	2	2	1	Conserved	hypothetical	ATP	binding	protein
RsgA_GTPase	PF03193.16	gi|289597034|ref|YP_003483730.1|	-	0.0011	18.9	0.1	0.0032	17.4	0.0	1.9	2	0	0	2	2	1	1	RsgA	GTPase
CbiA	PF01656.23	gi|289597034|ref|YP_003483730.1|	-	0.002	18.2	0.0	0.0072	16.4	0.0	1.9	1	1	1	2	2	2	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ABC_tran	PF00005.27	gi|289597034|ref|YP_003483730.1|	-	0.0022	18.5	0.0	0.0047	17.4	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
MobB	PF03205.14	gi|289597034|ref|YP_003483730.1|	-	0.0023	17.8	0.0	0.01	15.7	0.0	2.0	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
MipZ	PF09140.11	gi|289597034|ref|YP_003483730.1|	-	0.0024	17.2	0.0	0.0038	16.5	0.0	1.4	1	0	0	1	1	1	1	ATPase	MipZ
AAA_18	PF13238.6	gi|289597034|ref|YP_003483730.1|	-	0.0047	17.5	0.1	0.015	15.9	0.1	1.8	1	0	0	1	1	1	1	AAA	domain
AAA_30	PF13604.6	gi|289597034|ref|YP_003483730.1|	-	0.0062	16.3	0.0	0.011	15.5	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_25	PF13481.6	gi|289597034|ref|YP_003483730.1|	-	0.0073	15.9	0.0	0.028	14.0	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
AAA_19	PF13245.6	gi|289597034|ref|YP_003483730.1|	-	0.0074	16.6	0.1	0.015	15.7	0.1	1.4	1	0	0	1	1	1	1	AAA	domain
Fer4_NifH	PF00142.18	gi|289597034|ref|YP_003483730.1|	-	0.01	15.3	0.0	0.021	14.2	0.0	1.5	1	0	0	1	1	1	0	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
RNA_helicase	PF00910.22	gi|289597034|ref|YP_003483730.1|	-	0.01	16.2	0.1	0.032	14.6	0.0	1.9	2	0	0	2	2	1	0	RNA	helicase
NACHT	PF05729.12	gi|289597034|ref|YP_003483730.1|	-	0.013	15.5	0.0	0.028	14.4	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
AAA	PF00004.29	gi|289597034|ref|YP_003483730.1|	-	0.015	15.7	0.2	0.042	14.3	0.0	1.9	2	0	0	2	2	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_5	PF07728.14	gi|289597034|ref|YP_003483730.1|	-	0.029	14.4	0.0	0.059	13.4	0.0	1.6	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_23	PF13476.6	gi|289597034|ref|YP_003483730.1|	-	0.038	14.5	0.0	0.082	13.4	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
ATPase_2	PF01637.18	gi|289597034|ref|YP_003483730.1|	-	0.046	13.6	0.8	0.11	12.4	0.0	1.9	2	0	0	2	2	2	0	ATPase	domain	predominantly	from	Archaea
MMR_HSR1	PF01926.23	gi|289597034|ref|YP_003483730.1|	-	0.048	13.7	0.0	0.17	12.0	0.0	1.9	1	0	0	1	1	1	0	50S	ribosome-binding	GTPase
NB-ARC	PF00931.22	gi|289597034|ref|YP_003483730.1|	-	0.051	12.8	0.1	0.1	11.8	0.1	1.4	1	0	0	1	1	1	0	NB-ARC	domain
AAA_24	PF13479.6	gi|289597034|ref|YP_003483730.1|	-	0.054	13.2	0.1	0.28	10.9	0.1	2.0	2	0	0	2	2	2	0	AAA	domain
ParA	PF10609.9	gi|289597034|ref|YP_003483730.1|	-	0.064	12.7	1.2	0.23	10.9	0.0	2.2	3	0	0	3	3	2	0	NUBPL	iron-transfer	P-loop	NTPase
AAA_33	PF13671.6	gi|289597034|ref|YP_003483730.1|	-	0.064	13.4	0.0	0.089	12.9	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
T2SSE	PF00437.20	gi|289597034|ref|YP_003483730.1|	-	0.1	11.6	0.0	0.16	11.0	0.0	1.2	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
Mg_chelatase	PF01078.21	gi|289597034|ref|YP_003483730.1|	-	0.12	11.8	0.5	0.23	10.8	0.1	1.6	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
ArsR	PF09824.9	gi|289597034|ref|YP_003483730.1|	-	0.14	11.8	0.8	0.31	10.6	0.1	2.0	2	1	1	3	3	3	0	ArsR	transcriptional	regulator
AAA_28	PF13521.6	gi|289597034|ref|YP_003483730.1|	-	0.14	12.4	0.3	0.27	11.5	0.3	1.5	1	0	0	1	1	1	0	AAA	domain
Rad17	PF03215.15	gi|289597034|ref|YP_003483730.1|	-	0.2	11.6	0.6	1.2	9.0	0.1	2.1	2	0	0	2	2	2	0	Rad17	P-loop	domain
ArsA_ATPase	PF02374.15	gi|289597034|ref|YP_003483730.1|	-	0.27	10.4	2.2	0.29	10.3	0.2	2.1	2	1	0	2	2	2	0	Anion-transporting	ATPase
Glyoxalase_4	PF13669.6	gi|289597035|ref|YP_003483731.1|	-	4.7e-21	75.1	0.0	5.4e-21	74.9	0.0	1.0	1	0	0	1	1	1	1	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase	PF00903.25	gi|289597035|ref|YP_003483731.1|	-	8.4e-12	45.4	0.0	9e-12	45.3	0.0	1.0	1	0	0	1	1	1	1	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase_3	PF13468.6	gi|289597035|ref|YP_003483731.1|	-	8.3e-09	35.8	0.0	1e-08	35.5	0.0	1.1	1	0	0	1	1	1	1	Glyoxalase-like	domain
DUF1338	PF07063.13	gi|289597035|ref|YP_003483731.1|	-	0.085	12.0	0.0	1.5	8.0	0.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1338)
BAR	PF03114.18	gi|289597035|ref|YP_003483731.1|	-	0.17	11.5	0.0	0.19	11.4	0.0	1.2	1	0	0	1	1	1	0	BAR	domain
MM_CoA_mutase	PF01642.22	gi|289597036|ref|YP_003483732.1|	-	5.6e-232	770.8	0.1	6.7e-232	770.6	0.1	1.0	1	0	0	1	1	1	1	Methylmalonyl-CoA	mutase
Goodbye	PF17109.5	gi|289597036|ref|YP_003483732.1|	-	0.043	14.3	0.3	0.13	12.7	0.3	1.8	1	0	0	1	1	1	0	fungal	STAND	N-terminal	Goodbye	domain
RcbX	PF02341.15	gi|289597036|ref|YP_003483732.1|	-	0.16	12.3	1.4	0.39	11.0	1.4	1.6	1	0	0	1	1	1	0	RbcX	protein
SapB_1	PF05184.15	gi|289597036|ref|YP_003483732.1|	-	0.79	9.8	4.1	3	8.0	0.0	3.3	4	0	0	4	4	4	0	Saposin-like	type	B,	region	1
Carboxyl_trans	PF01039.22	gi|289597037|ref|YP_003483733.1|	-	2.7e-207	689.3	0.5	3.1e-207	689.1	0.5	1.0	1	0	0	1	1	1	1	Carboxyl	transferase	domain
MdcE	PF06833.11	gi|289597037|ref|YP_003483733.1|	-	5.6e-06	26.0	0.1	5.6e-06	26.0	0.1	2.0	3	0	0	3	3	3	1	Malonate	decarboxylase	gamma	subunit	(MdcE)
OAD_gamma	PF04277.13	gi|289597038|ref|YP_003483734.1|	-	9.6e-10	38.9	1.1	2e-09	37.9	1.1	1.6	1	0	0	1	1	1	1	Oxaloacetate	decarboxylase,	gamma	chain
DUF2615	PF11027.8	gi|289597038|ref|YP_003483734.1|	-	0.21	11.8	0.0	0.37	10.9	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2615)
Biotin_lipoyl	PF00364.22	gi|289597039|ref|YP_003483735.1|	-	2.3e-21	75.4	5.4	3.7e-21	74.7	5.4	1.3	1	0	0	1	1	1	1	Biotin-requiring	enzyme
Biotin_lipoyl_2	PF13533.6	gi|289597039|ref|YP_003483735.1|	-	3.4e-11	42.8	4.5	6.2e-07	29.2	0.1	2.2	1	1	1	2	2	2	2	Biotin-lipoyl	like
HlyD_D23	PF16576.5	gi|289597039|ref|YP_003483735.1|	-	3.7e-05	23.0	0.2	0.024	13.8	0.1	2.1	1	1	1	2	2	2	2	Barrel-sandwich	domain	of	CusB	or	HlyD	membrane-fusion
HlyD_3	PF13437.6	gi|289597039|ref|YP_003483735.1|	-	4.8e-05	24.0	0.7	0.061	14.0	0.4	2.4	2	0	0	2	2	2	2	HlyD	family	secretion	protein
GCV_H	PF01597.19	gi|289597039|ref|YP_003483735.1|	-	0.0019	18.1	0.4	0.0029	17.5	0.4	1.4	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
RnfC_N	PF13375.6	gi|289597039|ref|YP_003483735.1|	-	0.0041	17.0	3.3	0.012	15.6	2.1	2.1	2	1	0	2	2	2	1	RnfC	Barrel	sandwich	hybrid	domain
PTS_EIIA_1	PF00358.20	gi|289597039|ref|YP_003483735.1|	-	0.0088	15.8	0.8	0.19	11.5	0.0	2.7	2	1	0	3	3	3	1	phosphoenolpyruvate-dependent	sugar	phosphotransferase	system,	EIIA	1
NQRA	PF05896.11	gi|289597039|ref|YP_003483735.1|	-	0.019	14.4	1.5	0.064	12.7	1.5	1.8	1	1	0	1	1	1	0	Na(+)-translocating	NADH-quinone	reductase	subunit	A	(NQRA)
Peptidase_M23	PF01551.22	gi|289597039|ref|YP_003483735.1|	-	0.05	13.8	1.0	0.3	11.3	1.0	2.5	1	1	0	1	1	1	0	Peptidase	family	M23
PASTA	PF03793.19	gi|289597039|ref|YP_003483735.1|	-	0.054	13.3	1.8	1.3	8.9	0.3	2.4	1	1	1	2	2	2	0	PASTA	domain
PYNP_C	PF07831.13	gi|289597039|ref|YP_003483735.1|	-	0.22	11.2	2.6	5.6	6.7	2.6	2.1	1	1	0	1	1	1	0	Pyrimidine	nucleoside	phosphorylase	C-terminal	domain
YqfD	PF06898.11	gi|289597039|ref|YP_003483735.1|	-	0.3	9.9	8.6	0.75	8.6	0.7	2.8	1	1	1	2	2	2	0	Putative	stage	IV	sporulation	protein	YqfD
OAD_beta	PF03977.13	gi|289597040|ref|YP_003483736.1|	-	1.6e-158	527.3	32.7	1.8e-158	527.1	32.7	1.0	1	0	0	1	1	1	1	Na+-transporting	oxaloacetate	decarboxylase	beta	subunit
ABC_tran	PF00005.27	gi|289597041|ref|YP_003483737.1|	-	5e-28	98.3	0.0	1.1e-27	97.2	0.0	1.5	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.6	gi|289597041|ref|YP_003483737.1|	-	3.7e-10	40.1	0.7	0.00018	21.5	0.0	2.1	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
SMC_N	PF02463.19	gi|289597041|ref|YP_003483737.1|	-	2.9e-08	33.4	0.0	3.9e-08	33.0	0.0	1.2	1	0	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.6	gi|289597041|ref|YP_003483737.1|	-	2.5e-05	24.2	0.0	0.00016	21.5	0.0	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_29	PF13555.6	gi|289597041|ref|YP_003483737.1|	-	7.1e-05	22.5	0.0	0.00013	21.6	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.6	gi|289597041|ref|YP_003483737.1|	-	0.00048	20.7	0.1	0.0009	19.8	0.1	1.5	1	1	0	1	1	1	1	AAA	domain
Ploopntkinase3	PF18751.1	gi|289597041|ref|YP_003483737.1|	-	0.0083	16.1	0.0	0.016	15.1	0.0	1.5	1	0	0	1	1	1	1	P-loop	Nucleotide	Kinase3
AAA_25	PF13481.6	gi|289597041|ref|YP_003483737.1|	-	0.0095	15.5	0.0	0.017	14.7	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.6	gi|289597041|ref|YP_003483737.1|	-	0.013	15.9	0.0	0.027	14.8	0.0	1.6	1	1	0	1	1	1	0	AAA	ATPase	domain
RsgA_GTPase	PF03193.16	gi|289597041|ref|YP_003483737.1|	-	0.016	15.1	0.0	0.026	14.4	0.0	1.3	1	0	0	1	1	1	0	RsgA	GTPase
AAA_22	PF13401.6	gi|289597041|ref|YP_003483737.1|	-	0.04	14.2	0.1	0.046	14.0	0.1	1.5	1	1	0	1	1	1	0	AAA	domain
CbiQ	PF02361.16	gi|289597042|ref|YP_003483738.1|	-	7.9e-37	127.0	16.6	7.9e-37	127.0	16.6	1.4	2	0	0	2	2	2	1	Cobalt	transport	protein
ECSCR	PF15820.5	gi|289597042|ref|YP_003483738.1|	-	3.9	7.3	5.7	0.66	9.8	1.4	1.9	2	0	0	2	2	2	0	Endothelial	cell-specific	chemotaxis	regulator
PDGLE	PF13190.6	gi|289597043|ref|YP_003483739.1|	-	6e-05	22.9	0.3	9.7e-05	22.2	0.3	1.6	1	1	0	1	1	1	1	PDGLE	domain
DUF2207	PF09972.9	gi|289597043|ref|YP_003483739.1|	-	0.052	12.3	0.2	0.055	12.2	0.2	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
Peptidase_M50B	PF13398.6	gi|289597043|ref|YP_003483739.1|	-	0.31	10.7	4.3	0.87	9.2	0.7	2.1	1	1	1	2	2	2	0	Peptidase	M50B-like
CbiM	PF01891.16	gi|289597044|ref|YP_003483740.1|	-	2.1e-63	213.9	12.9	2.4e-63	213.8	12.9	1.0	1	0	0	1	1	1	1	Cobalt	uptake	substrate-specific	transmembrane	region
ECF_trnsprt	PF12822.7	gi|289597044|ref|YP_003483740.1|	-	0.00024	21.2	20.7	0.00024	21.2	20.7	2.1	2	1	0	2	2	2	1	ECF	transporter,	substrate-specific	component
EXS	PF03124.14	gi|289597044|ref|YP_003483740.1|	-	0.00034	20.1	2.5	0.00046	19.6	2.5	1.1	1	0	0	1	1	1	1	EXS	family
DUF1240	PF06836.12	gi|289597044|ref|YP_003483740.1|	-	0.34	11.5	2.6	3.2	8.4	0.7	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1240)
DUF4131	PF13567.6	gi|289597044|ref|YP_003483740.1|	-	4.7	6.8	5.3	19	4.9	0.1	2.5	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4131)
NikR_C	PF08753.11	gi|289597045|ref|YP_003483741.1|	-	3.7e-29	100.7	3.7	5e-29	100.3	3.7	1.2	1	0	0	1	1	1	1	NikR	C	terminal	nickel	binding	domain
RHH_1	PF01402.21	gi|289597045|ref|YP_003483741.1|	-	2.5e-07	30.4	2.5	2.6e-07	30.3	0.5	2.1	3	0	0	3	3	3	1	Ribbon-helix-helix	protein,	copG	family
YpjP	PF14005.6	gi|289597045|ref|YP_003483741.1|	-	0.033	14.2	0.3	0.052	13.6	0.3	1.4	1	0	0	1	1	1	0	YpjP-like	protein
NOG1_N	PF17835.1	gi|289597045|ref|YP_003483741.1|	-	0.081	12.9	0.1	0.14	12.1	0.1	1.3	1	0	0	1	1	1	0	NOG1	N-terminal	helical	domain
Metallophos_2	PF12850.7	gi|289597046|ref|YP_003483742.1|	-	1.5e-16	61.0	0.0	3.7e-16	59.8	0.0	1.5	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.28	gi|289597046|ref|YP_003483742.1|	-	1.7e-16	61.3	0.7	2.6e-16	60.7	0.7	1.3	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_3	PF14582.6	gi|289597046|ref|YP_003483742.1|	-	1.8e-16	60.2	0.2	1.6e-14	53.9	0.1	2.6	1	1	1	2	2	2	2	Metallophosphoesterase,	calcineurin	superfamily
zf-ribbon_3	PF13248.6	gi|289597047|ref|YP_003483743.1|	-	1.2e-08	34.1	1.4	1.9e-08	33.4	1.4	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
DUF3450	PF11932.8	gi|289597047|ref|YP_003483743.1|	-	6.1e-06	25.7	5.1	6.1e-06	25.7	5.1	2.1	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF3450)
UPF0547	PF10571.9	gi|289597047|ref|YP_003483743.1|	-	0.00013	21.9	0.7	0.00023	21.2	0.7	1.4	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
zf-tcix	PF14952.6	gi|289597047|ref|YP_003483743.1|	-	0.00014	21.4	1.4	0.00027	20.5	1.4	1.4	1	0	0	1	1	1	1	Putative	treble-clef,	zinc-finger,	Zn-binding
Exonuc_VII_L	PF02601.15	gi|289597047|ref|YP_003483743.1|	-	0.00022	20.9	14.0	0.00031	20.4	14.0	1.1	1	0	0	1	1	1	1	Exonuclease	VII,	large	subunit
DZR	PF12773.7	gi|289597047|ref|YP_003483743.1|	-	0.00026	20.9	1.0	0.00048	20.1	1.0	1.4	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_2	PF13240.6	gi|289597047|ref|YP_003483743.1|	-	0.00069	19.2	2.7	0.0017	18.0	2.7	1.7	1	0	0	1	1	1	1	zinc-ribbon	domain
DUF3552	PF12072.8	gi|289597047|ref|YP_003483743.1|	-	0.0016	17.9	41.5	0.0034	16.8	18.0	3.2	1	1	2	3	3	3	2	Domain	of	unknown	function	(DUF3552)
DNA_RNApol_7kD	PF03604.13	gi|289597047|ref|YP_003483743.1|	-	0.0036	17.0	1.7	0.76	9.5	2.5	2.4	1	1	1	2	2	2	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
MAD	PF05557.13	gi|289597047|ref|YP_003483743.1|	-	0.0048	15.3	29.1	0.0078	14.6	29.1	1.3	1	0	0	1	1	1	1	Mitotic	checkpoint	protein
Mu-like_Com	PF10122.9	gi|289597047|ref|YP_003483743.1|	-	0.0053	16.2	1.5	0.0096	15.4	0.8	1.8	1	1	0	1	1	1	1	Mu-like	prophage	protein	Com
Spc7	PF08317.11	gi|289597047|ref|YP_003483743.1|	-	0.0061	15.5	35.5	0.1	11.5	16.9	2.1	1	1	1	2	2	2	2	Spc7	kinetochore	protein
Baculo_PEP_C	PF04513.12	gi|289597047|ref|YP_003483743.1|	-	0.017	15.2	6.8	2.1	8.4	6.8	2.1	1	1	0	1	1	1	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Zn-ribbon_8	PF09723.10	gi|289597047|ref|YP_003483743.1|	-	0.024	14.8	1.3	0.19	11.9	0.1	2.4	1	1	1	2	2	2	0	Zinc	ribbon	domain
NPV_P10	PF05531.12	gi|289597047|ref|YP_003483743.1|	-	0.047	14.2	6.7	4.5	7.8	1.0	2.9	1	1	1	2	2	2	0	Nucleopolyhedrovirus	P10	protein
zinc_ribbon_15	PF17032.5	gi|289597047|ref|YP_003483743.1|	-	0.051	14.3	1.1	0.16	12.7	1.1	1.8	1	0	0	1	1	1	0	zinc-ribbon	family
FlaC_arch	PF05377.11	gi|289597047|ref|YP_003483743.1|	-	0.052	14.0	1.4	0.052	14.0	1.4	3.4	2	1	1	3	3	3	0	Flagella	accessory	protein	C	(FlaC)
Tropomyosin	PF00261.20	gi|289597047|ref|YP_003483743.1|	-	0.06	12.7	36.4	0.08	12.3	36.4	1.1	1	0	0	1	1	1	0	Tropomyosin
DUF948	PF06103.11	gi|289597047|ref|YP_003483743.1|	-	0.081	13.2	6.3	1.1	9.6	0.6	2.9	1	1	2	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF948)
Erythro_esteras	PF05139.14	gi|289597047|ref|YP_003483743.1|	-	0.14	12.0	5.3	0.16	11.8	5.3	1.2	1	0	0	1	1	1	0	Erythromycin	esterase
Dynein_C	PF18199.1	gi|289597047|ref|YP_003483743.1|	-	0.16	11.2	6.5	0.2	10.8	6.5	1.2	1	0	0	1	1	1	0	Dynein	heavy	chain	C-terminal	domain
DUF1664	PF07889.12	gi|289597047|ref|YP_003483743.1|	-	0.2	11.7	12.5	0.052	13.6	2.4	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1664)
Radical_SAM_N	PF08497.10	gi|289597047|ref|YP_003483743.1|	-	0.22	10.7	2.8	4.8	6.3	4.5	1.9	2	0	0	2	2	2	0	Radical	SAM	N-terminal
zf-ACC	PF17848.1	gi|289597047|ref|YP_003483743.1|	-	0.24	11.5	0.1	0.24	11.5	0.1	2.6	3	0	0	3	3	2	0	Acetyl-coA	carboxylase	zinc	finger	domain
DUF3584	PF12128.8	gi|289597047|ref|YP_003483743.1|	-	0.41	8.1	21.5	0.56	7.7	21.5	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
IFT57	PF10498.9	gi|289597047|ref|YP_003483743.1|	-	0.58	9.1	29.0	0.028	13.4	14.6	2.5	1	1	2	3	3	3	0	Intra-flagellar	transport	protein	57
CSN5_C	PF18323.1	gi|289597047|ref|YP_003483743.1|	-	0.78	10.7	0.0	0.78	10.7	0.0	3.2	2	1	0	2	2	1	0	Cop9	signalosome	subunit	5	C-terminal	domain
Sec34	PF04136.15	gi|289597047|ref|YP_003483743.1|	-	0.82	9.5	16.0	4.6	7.1	1.8	2.8	1	1	2	3	3	3	0	Sec34-like	family
ERM	PF00769.19	gi|289597047|ref|YP_003483743.1|	-	0.83	9.4	36.5	2.2	8.0	36.6	1.4	1	1	0	1	1	1	0	Ezrin/radixin/moesin	family
V_ATPase_I	PF01496.19	gi|289597047|ref|YP_003483743.1|	-	0.85	7.5	20.4	2.1	6.2	20.4	1.6	1	1	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
Dus	PF01207.17	gi|289597047|ref|YP_003483743.1|	-	1.1	8.2	7.9	0.1	11.6	2.4	1.9	1	1	1	2	2	2	0	Dihydrouridine	synthase	(Dus)
HemX	PF04375.14	gi|289597047|ref|YP_003483743.1|	-	1.4	8.1	16.3	2.8	7.1	3.2	2.2	1	1	1	2	2	2	0	HemX,	putative	uroporphyrinogen-III	C-methyltransferase
Fez1	PF06818.15	gi|289597047|ref|YP_003483743.1|	-	1.5	9.2	29.8	1.4e+02	2.8	29.9	2.1	1	1	0	1	1	1	0	Fez1
zinc_ribbon_5	PF13719.6	gi|289597047|ref|YP_003483743.1|	-	1.5	8.6	3.5	26	4.7	3.5	2.6	1	1	0	1	1	1	0	zinc-ribbon	domain
Taxilin	PF09728.9	gi|289597047|ref|YP_003483743.1|	-	2	7.5	37.6	0.23	10.6	24.0	2.0	1	1	1	2	2	2	0	Myosin-like	coiled-coil	protein
TPR_MLP1_2	PF07926.12	gi|289597047|ref|YP_003483743.1|	-	2.1	8.4	36.4	1.8	8.6	18.9	2.9	1	1	1	2	2	2	0	TPR/MLP1/MLP2-like	protein
HOOK	PF05622.12	gi|289597047|ref|YP_003483743.1|	-	2.2	6.3	31.0	2.8	6.0	31.0	1.1	1	0	0	1	1	1	0	HOOK	protein
YjcZ	PF13990.6	gi|289597047|ref|YP_003483743.1|	-	2.3	7.5	5.4	3.9	6.8	4.7	1.6	1	1	1	2	2	2	0	YjcZ-like	protein
Nup54	PF13874.6	gi|289597047|ref|YP_003483743.1|	-	3.1	7.9	16.2	76	3.4	15.9	2.2	1	1	0	1	1	1	0	Nucleoporin	complex	subunit	54
CALCOCO1	PF07888.11	gi|289597047|ref|YP_003483743.1|	-	4.1	6.2	28.9	5.8	5.7	28.9	1.2	1	0	0	1	1	1	0	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
SlyX	PF04102.12	gi|289597047|ref|YP_003483743.1|	-	6	7.6	12.3	3.1	8.5	0.1	3.2	1	1	2	3	3	3	0	SlyX
Med9	PF07544.13	gi|289597047|ref|YP_003483743.1|	-	6.4	6.9	30.3	0.11	12.5	10.1	3.3	1	1	2	3	3	3	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
UPF0242	PF06785.11	gi|289597047|ref|YP_003483743.1|	-	6.7	6.8	35.4	0.12	12.4	26.7	2.0	1	1	1	2	2	2	0	Uncharacterised	protein	family	(UPF0242)	N-terminus
Fib_alpha	PF08702.10	gi|289597047|ref|YP_003483743.1|	-	7.4	6.8	20.9	9.4	6.4	3.1	2.4	1	1	1	2	2	2	0	Fibrinogen	alpha/beta	chain	family
CheZ	PF04344.13	gi|289597047|ref|YP_003483743.1|	-	8	6.3	16.9	3	7.7	3.6	2.3	1	1	1	2	2	2	0	Chemotaxis	phosphatase,	CheZ
Glyco_hydro_65m	PF03632.15	gi|289597047|ref|YP_003483743.1|	-	8.5	5.1	9.2	12	4.6	9.2	1.1	1	0	0	1	1	1	0	Glycosyl	hydrolase	family	65	central	catalytic	domain
AATF-Che1	PF13339.6	gi|289597047|ref|YP_003483743.1|	-	9.3	6.9	21.9	6.9	7.4	9.3	2.7	1	1	1	2	2	1	0	Apoptosis	antagonizing	transcription	factor
OrfB_Zn_ribbon	PF07282.11	gi|289597047|ref|YP_003483743.1|	-	9.6	6.2	6.9	1.4	8.9	1.0	2.6	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
PPS_PS	PF02006.16	gi|289597048|ref|YP_003483744.1|	-	1.1e-71	240.0	3.1	1.4e-71	239.7	3.1	1.1	1	0	0	1	1	1	1	Phosphopantothenate/pantothenate	synthetase
BLOC1_2	PF10046.9	gi|289597048|ref|YP_003483744.1|	-	0.067	13.5	0.6	0.15	12.4	0.6	1.6	1	0	0	1	1	1	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
DHHA1	PF02272.19	gi|289597049|ref|YP_003483745.1|	-	5.9e-18	65.6	0.7	4.3e-17	62.8	0.1	2.6	2	1	1	3	3	3	1	DHHA1	domain
DHH	PF01368.20	gi|289597049|ref|YP_003483745.1|	-	2.2e-05	24.6	0.2	5.4e-05	23.4	0.2	1.7	1	0	0	1	1	1	1	DHH	family
DUF3666	PF12408.8	gi|289597049|ref|YP_003483745.1|	-	0.13	11.4	0.1	0.13	11.4	0.1	1.9	2	0	0	2	2	2	0	Ribose-5-phosphate	isomerase
Ribosomal_S13_N	PF08069.12	gi|289597050|ref|YP_003483746.1|	-	1.6e-25	88.9	1.1	3e-25	88.0	0.5	1.8	2	0	0	2	2	2	1	Ribosomal	S13/S15	N-terminal	domain
Ribosomal_S15	PF00312.22	gi|289597050|ref|YP_003483746.1|	-	1.2e-15	57.4	0.0	1.9e-15	56.8	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	protein	S15
DDE_Tnp_1	PF01609.21	gi|289597051|ref|YP_003483747.1|	-	6.2e-16	58.7	0.0	1.2e-15	57.7	0.0	1.6	1	0	0	1	1	1	1	Transposase	DDE	domain
DUF772	PF05598.11	gi|289597051|ref|YP_003483747.1|	-	0.0044	17.0	0.6	0.0084	16.1	0.6	1.5	1	0	0	1	1	1	1	Transposase	domain	(DUF772)
DUF429	PF04250.13	gi|289597052|ref|YP_003483748.1|	-	4.5e-06	26.6	0.0	5e-06	26.4	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF429)
SMC_N	PF02463.19	gi|289597054|ref|YP_003483750.1|	-	1.5e-51	175.0	67.9	7e-50	169.5	67.9	4.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
SMC_hinge	PF06470.13	gi|289597054|ref|YP_003483750.1|	-	2.1e-32	111.9	0.0	5.9e-32	110.4	0.0	1.9	1	0	0	1	1	1	1	SMC	proteins	Flexible	Hinge	Domain
AAA_23	PF13476.6	gi|289597054|ref|YP_003483750.1|	-	1.3e-19	71.5	10.1	1.3e-19	71.5	10.1	8.5	2	2	4	6	6	2	1	AAA	domain
AAA_15	PF13175.6	gi|289597054|ref|YP_003483750.1|	-	2.5e-14	53.8	28.9	2.5e-14	53.8	28.9	4.6	2	2	2	4	4	1	1	AAA	ATPase	domain
AAA_29	PF13555.6	gi|289597054|ref|YP_003483750.1|	-	4.5e-09	35.9	0.0	8.6e-09	35.0	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
Baculo_PEP_C	PF04513.12	gi|289597054|ref|YP_003483750.1|	-	5.4e-08	33.0	32.4	0.0072	16.4	0.2	7.1	4	2	2	6	6	6	2	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
AAA_21	PF13304.6	gi|289597054|ref|YP_003483750.1|	-	8.2e-07	29.1	5.8	0.00023	21.1	0.0	5.3	3	2	2	5	5	5	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
EzrA	PF06160.12	gi|289597054|ref|YP_003483750.1|	-	4.4e-05	21.9	143.2	0.0001	20.6	50.5	3.4	2	1	0	3	3	3	2	Septation	ring	formation	regulator,	EzrA
GAS	PF13851.6	gi|289597054|ref|YP_003483750.1|	-	0.00061	19.2	169.9	0.0035	16.7	34.8	8.8	2	2	6	8	8	8	4	Growth-arrest	specific	micro-tubule	binding
APG6_N	PF17675.1	gi|289597054|ref|YP_003483750.1|	-	0.00078	20.0	164.0	0.043	14.3	14.8	8.9	2	2	6	8	8	8	3	Apg6	coiled-coil	region
FapA	PF03961.13	gi|289597054|ref|YP_003483750.1|	-	0.0024	16.6	10.7	0.0024	16.6	10.7	8.1	2	2	6	8	8	8	3	Flagellar	Assembly	Protein	A
BRE1	PF08647.11	gi|289597054|ref|YP_003483750.1|	-	0.0038	17.3	6.5	0.0038	17.3	6.5	10.8	4	3	6	10	10	9	3	BRE1	E3	ubiquitin	ligase
DUF3450	PF11932.8	gi|289597054|ref|YP_003483750.1|	-	0.0068	15.7	13.7	0.0068	15.7	13.7	9.3	3	2	7	10	10	10	2	Protein	of	unknown	function	(DUF3450)
BSD	PF03909.17	gi|289597054|ref|YP_003483750.1|	-	0.044	13.8	0.3	0.044	13.8	0.3	4.8	4	0	0	4	4	4	0	BSD	domain
MHB	PF16525.5	gi|289597054|ref|YP_003483750.1|	-	0.076	13.3	3.0	5.7	7.3	0.1	2.9	2	0	0	2	2	2	0	Haemophore,	haem-binding
AAA_13	PF13166.6	gi|289597054|ref|YP_003483750.1|	-	0.093	11.4	136.7	0.19	10.3	37.3	6.4	3	2	3	6	6	6	0	AAA	domain
ABC_tran	PF00005.27	gi|289597054|ref|YP_003483750.1|	-	0.19	12.3	0.0	0.19	12.3	0.0	6.9	3	2	0	3	3	1	0	ABC	transporter
TMEM191C	PF15194.6	gi|289597054|ref|YP_003483750.1|	-	0.2	11.9	0.9	0.64	10.2	0.1	2.2	2	0	0	2	2	2	0	TMEM191C	family
FUSC	PF04632.12	gi|289597054|ref|YP_003483750.1|	-	0.77	8.2	8.0	3.4	6.1	0.2	3.3	2	1	1	3	3	3	0	Fusaric	acid	resistance	protein	family
Spc7	PF08317.11	gi|289597054|ref|YP_003483750.1|	-	0.8	8.5	155.1	0.024	13.6	28.6	8.2	2	2	4	7	7	7	0	Spc7	kinetochore	protein
DUF948	PF06103.11	gi|289597054|ref|YP_003483750.1|	-	1.2	9.5	46.9	0.096	13.0	3.0	9.0	8	2	0	8	8	8	0	Bacterial	protein	of	unknown	function	(DUF948)
MukB	PF04310.12	gi|289597054|ref|YP_003483750.1|	-	1.7	8.4	0.0	1.7	8.4	0.0	4.7	5	1	1	6	6	6	0	MukB	N-terminal
MscS_porin	PF12795.7	gi|289597054|ref|YP_003483750.1|	-	3.7	7.0	92.7	0.054	13.0	15.6	6.7	4	2	1	7	7	7	0	Mechanosensitive	ion	channel	porin	domain
SMC_ScpA	PF02616.14	gi|289597055|ref|YP_003483751.1|	-	3e-07	30.6	6.5	3.8e-06	27.0	6.5	2.2	1	1	0	1	1	1	1	Segregation	and	condensation	protein	ScpA
Rad21_Rec8	PF04824.16	gi|289597055|ref|YP_003483751.1|	-	0.0053	16.0	1.2	0.0093	15.2	0.1	1.9	2	0	0	2	2	2	1	Conserved	region	of	Rad21	/	Rec8	like	protein
RNA_pol_L_2	PF13656.6	gi|289597056|ref|YP_003483752.1|	-	3.1e-15	55.7	0.2	4.3e-15	55.2	0.2	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
AAA	PF00004.29	gi|289597057|ref|YP_003483753.1|	-	3e-43	147.4	0.0	5.5e-43	146.6	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_lid_3	PF17862.1	gi|289597057|ref|YP_003483753.1|	-	3.1e-18	65.3	0.1	6.4e-18	64.3	0.1	1.6	1	0	0	1	1	1	1	AAA+	lid	domain
Prot_ATP_ID_OB	PF16450.5	gi|289597057|ref|YP_003483753.1|	-	1.6e-13	50.4	0.0	3.2e-13	49.4	0.0	1.5	1	0	0	1	1	1	1	Proteasomal	ATPase	OB	C-terminal	domain
AAA_2	PF07724.14	gi|289597057|ref|YP_003483753.1|	-	9.3e-08	32.4	0.0	2.2e-06	27.9	0.0	2.5	2	0	0	2	2	2	1	AAA	domain	(Cdc48	subfamily)
AAA_16	PF13191.6	gi|289597057|ref|YP_003483753.1|	-	2.7e-06	27.9	0.8	0.00096	19.6	0.1	2.6	1	1	1	2	2	2	1	AAA	ATPase	domain
RuvB_N	PF05496.12	gi|289597057|ref|YP_003483753.1|	-	3e-06	27.1	0.1	2.1e-05	24.3	0.1	2.3	2	1	0	2	2	2	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_5	PF07728.14	gi|289597057|ref|YP_003483753.1|	-	1.7e-05	24.9	2.9	9.3e-05	22.5	0.4	3.0	2	2	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_33	PF13671.6	gi|289597057|ref|YP_003483753.1|	-	0.00011	22.3	0.1	0.00079	19.6	0.1	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_28	PF13521.6	gi|289597057|ref|YP_003483753.1|	-	0.00017	21.9	0.1	0.00054	20.2	0.0	1.9	2	0	0	2	2	1	1	AAA	domain
AAA_18	PF13238.6	gi|289597057|ref|YP_003483753.1|	-	0.00026	21.6	0.0	0.00076	20.0	0.0	1.9	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.6	gi|289597057|ref|YP_003483753.1|	-	0.00031	21.0	0.3	0.044	14.1	0.1	2.7	1	1	1	2	2	2	1	AAA	domain
DUF815	PF05673.13	gi|289597057|ref|YP_003483753.1|	-	0.00059	19.1	0.0	0.0014	17.8	0.0	1.6	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
TIP49	PF06068.13	gi|289597057|ref|YP_003483753.1|	-	0.0016	17.7	0.0	0.0027	17.0	0.0	1.4	1	0	0	1	1	1	1	TIP49	P-loop	domain
IstB_IS21	PF01695.17	gi|289597057|ref|YP_003483753.1|	-	0.003	17.3	0.0	0.0067	16.2	0.0	1.5	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
Prot_ATP_OB_N	PF17758.1	gi|289597057|ref|YP_003483753.1|	-	0.0056	16.3	0.0	0.015	15.0	0.0	1.7	1	0	0	1	1	1	1	Proteasomal	ATPase	OB	N-terminal	domain
Zeta_toxin	PF06414.12	gi|289597057|ref|YP_003483753.1|	-	0.0073	15.6	0.0	0.016	14.5	0.0	1.6	1	0	0	1	1	1	1	Zeta	toxin
AAA_25	PF13481.6	gi|289597057|ref|YP_003483753.1|	-	0.0077	15.8	0.3	0.13	11.8	0.1	2.4	2	0	0	2	2	2	1	AAA	domain
Mg_chelatase	PF01078.21	gi|289597057|ref|YP_003483753.1|	-	0.0083	15.5	0.1	0.025	14.0	0.1	1.7	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_14	PF13173.6	gi|289597057|ref|YP_003483753.1|	-	0.0084	16.1	0.0	0.032	14.3	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
ATPase	PF06745.13	gi|289597057|ref|YP_003483753.1|	-	0.0089	15.4	2.1	0.14	11.5	0.0	2.6	2	1	1	3	3	3	1	KaiC
DUF4200	PF13863.6	gi|289597057|ref|YP_003483753.1|	-	0.025	15.0	0.6	0.064	13.6	0.2	1.9	2	0	0	2	2	1	0	Domain	of	unknown	function	(DUF4200)
Sigma54_activat	PF00158.26	gi|289597057|ref|YP_003483753.1|	-	0.029	14.1	0.3	0.18	11.5	0.0	2.2	2	1	0	2	2	2	0	Sigma-54	interaction	domain
TsaE	PF02367.17	gi|289597057|ref|YP_003483753.1|	-	0.03	14.3	0.0	0.057	13.4	0.0	1.5	1	0	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
RNA_helicase	PF00910.22	gi|289597057|ref|YP_003483753.1|	-	0.033	14.6	0.0	0.091	13.2	0.0	1.7	2	0	0	2	2	1	0	RNA	helicase
DUF1319	PF07028.11	gi|289597057|ref|YP_003483753.1|	-	0.038	14.2	0.3	0.11	12.7	0.1	1.9	2	0	0	2	2	1	0	Protein	of	unknown	function	(DUF1319)
AAA_3	PF07726.11	gi|289597057|ref|YP_003483753.1|	-	0.038	13.8	0.0	0.08	12.8	0.0	1.6	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
PhoH	PF02562.16	gi|289597057|ref|YP_003483753.1|	-	0.041	13.3	0.0	0.072	12.5	0.0	1.4	1	0	0	1	1	1	0	PhoH-like	protein
AAA_30	PF13604.6	gi|289597057|ref|YP_003483753.1|	-	0.044	13.5	0.4	0.15	11.7	0.4	1.9	1	1	0	1	1	1	0	AAA	domain
SOGA	PF11365.8	gi|289597057|ref|YP_003483753.1|	-	0.07	14.3	0.5	0.15	13.2	0.5	1.6	1	0	0	1	1	1	0	Protein	SOGA
AAA_17	PF13207.6	gi|289597057|ref|YP_003483753.1|	-	0.075	13.5	0.1	0.27	11.7	0.1	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_7	PF12775.7	gi|289597057|ref|YP_003483753.1|	-	0.077	12.5	0.0	0.18	11.3	0.0	1.6	1	0	0	1	1	1	0	P-loop	containing	dynein	motor	region
AAA_11	PF13086.6	gi|289597057|ref|YP_003483753.1|	-	0.079	12.7	0.1	0.28	10.9	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
AAA_24	PF13479.6	gi|289597057|ref|YP_003483753.1|	-	0.13	11.9	0.0	0.24	11.1	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_19	PF13245.6	gi|289597057|ref|YP_003483753.1|	-	0.14	12.5	0.6	0.43	10.9	0.4	1.7	1	1	0	1	1	1	0	AAA	domain
JIP_LZII	PF16471.5	gi|289597057|ref|YP_003483753.1|	-	0.14	12.3	1.5	0.33	11.2	1.5	1.5	1	0	0	1	1	1	0	JNK-interacting	protein	leucine	zipper	II
EFhand_Ca_insen	PF08726.10	gi|289597057|ref|YP_003483753.1|	-	0.17	12.0	0.2	4.8	7.3	0.0	2.5	2	0	0	2	2	2	0	Ca2+	insensitive	EF	hand
Prefoldin_2	PF01920.20	gi|289597057|ref|YP_003483753.1|	-	0.17	11.8	1.6	0.39	10.7	0.6	2.0	2	0	0	2	2	2	0	Prefoldin	subunit
ABC_tran	PF00005.27	gi|289597057|ref|YP_003483753.1|	-	0.18	12.3	0.0	0.83	10.2	0.0	2.1	1	0	0	1	1	1	0	ABC	transporter
NACHT	PF05729.12	gi|289597057|ref|YP_003483753.1|	-	0.18	11.7	0.2	0.91	9.4	0.1	2.0	1	1	1	2	2	2	0	NACHT	domain
TolA_bind_tri	PF16331.5	gi|289597057|ref|YP_003483753.1|	-	3	8.0	6.2	0.25	11.5	0.8	2.0	3	0	0	3	3	1	0	TolA	binding	protein	trimerisation
DUF87	PF01935.17	gi|289597058|ref|YP_003483754.1|	-	1.5e-37	129.9	0.2	2.7e-37	129.1	0.2	1.4	1	0	0	1	1	1	1	Helicase	HerA,	central	domain
DUF853	PF05872.12	gi|289597058|ref|YP_003483754.1|	-	4.5e-08	32.1	0.0	0.003	16.2	0.0	2.1	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
TrwB_AAD_bind	PF10412.9	gi|289597058|ref|YP_003483754.1|	-	1.8e-05	23.8	0.0	0.0039	16.1	0.0	2.3	2	0	0	2	2	2	2	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
HAS-barrel	PF09378.10	gi|289597058|ref|YP_003483754.1|	-	0.00018	21.6	1.8	0.00046	20.3	1.8	1.8	1	0	0	1	1	1	1	HAS	barrel	domain
T4SS-DNA_transf	PF02534.14	gi|289597058|ref|YP_003483754.1|	-	0.0024	16.8	0.0	0.0033	16.3	0.0	1.2	1	0	0	1	1	1	1	Type	IV	secretory	system	Conjugative	DNA	transfer
AAA_10	PF12846.7	gi|289597058|ref|YP_003483754.1|	-	0.0091	14.9	0.0	0.043	12.7	0.1	1.9	2	0	0	2	2	2	1	AAA-like	domain
DUF357	PF04010.13	gi|289597059|ref|YP_003483755.1|	-	1e-28	99.2	0.4	1.2e-28	99.0	0.4	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF357)
Sulfolobus_pRN	PF05584.11	gi|289597061|ref|YP_003483757.1|	-	0.046	13.8	0.1	0.082	13.0	0.1	1.4	1	0	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
GATase_7	PF13537.6	gi|289597062|ref|YP_003483758.1|	-	4.6e-22	78.2	0.0	7.3e-22	77.6	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_6	PF13522.6	gi|289597062|ref|YP_003483758.1|	-	4.1e-20	72.3	0.0	6.7e-20	71.6	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
Pribosyltran	PF00156.27	gi|289597062|ref|YP_003483758.1|	-	1.3e-10	41.0	0.1	2.8e-10	39.9	0.1	1.5	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
GATase_4	PF13230.6	gi|289597062|ref|YP_003483758.1|	-	5.8e-07	28.7	0.0	8.5e-07	28.1	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
GATase_2	PF00310.21	gi|289597062|ref|YP_003483758.1|	-	0.0032	16.2	0.0	0.0056	15.4	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
PRTase_2	PF15609.6	gi|289597062|ref|YP_003483758.1|	-	0.0059	16.1	0.0	0.013	15.1	0.0	1.5	1	0	0	1	1	1	1	Phosphoribosyl	transferase
Ribosomal_L37e	PF01907.19	gi|289597063|ref|YP_003483759.1|	-	1.6e-24	85.8	13.5	1.7e-24	85.7	13.5	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L37e
Rubredoxin_2	PF18073.1	gi|289597063|ref|YP_003483759.1|	-	0.00072	19.2	2.3	0.23	11.2	0.1	2.3	2	0	0	2	2	2	2	Rubredoxin	metal	binding	domain
DZR	PF12773.7	gi|289597063|ref|YP_003483759.1|	-	0.00075	19.5	1.3	0.00088	19.2	1.3	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-ribbon_3	PF13248.6	gi|289597063|ref|YP_003483759.1|	-	0.00083	18.7	1.8	0.22	11.0	0.2	2.2	2	0	0	2	2	2	2	zinc-ribbon	domain
HypA	PF01155.19	gi|289597063|ref|YP_003483759.1|	-	0.0035	17.4	0.7	0.0035	17.4	0.7	1.1	1	0	0	1	1	1	1	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
SelR	PF01641.18	gi|289597063|ref|YP_003483759.1|	-	0.0043	17.1	0.2	0.0046	17.0	0.2	1.1	1	0	0	1	1	1	1	SelR	domain
zinc_ribbon_2	PF13240.6	gi|289597063|ref|YP_003483759.1|	-	0.013	15.2	5.2	0.033	13.9	5.2	1.7	1	1	1	2	2	2	0	zinc-ribbon	domain
UPF0547	PF10571.9	gi|289597063|ref|YP_003483759.1|	-	0.04	14.0	6.4	0.19	11.8	0.8	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zf-RING_10	PF16685.5	gi|289597063|ref|YP_003483759.1|	-	0.054	13.6	2.9	0.056	13.6	2.9	1.1	1	0	0	1	1	1	0	zinc	RING	finger	of	MSL2
zn-ribbon_14	PF16503.5	gi|289597063|ref|YP_003483759.1|	-	0.28	10.7	3.7	2.3	7.8	0.2	2.2	2	0	0	2	2	2	0	Zinc-ribbon
OrfB_Zn_ribbon	PF07282.11	gi|289597063|ref|YP_003483759.1|	-	0.3	11.0	5.6	0.99	9.4	5.3	1.8	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
zf-Mss51	PF13824.6	gi|289597063|ref|YP_003483759.1|	-	0.39	10.9	5.6	1.5	9.0	0.3	2.1	1	1	1	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
Zn_Tnp_IS1595	PF12760.7	gi|289597063|ref|YP_003483759.1|	-	0.46	10.5	8.3	0.87	9.6	7.8	1.7	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
zinc_ribbon_13	PF09855.9	gi|289597063|ref|YP_003483759.1|	-	1.4	9.1	4.9	1.6	8.9	0.3	2.1	1	1	2	3	3	3	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
DNA_RNApol_7kD	PF03604.13	gi|289597063|ref|YP_003483759.1|	-	2.4	7.9	10.6	3.5	7.4	2.6	2.1	1	1	1	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
LSM	PF01423.22	gi|289597064|ref|YP_003483760.1|	-	9.8e-22	76.4	0.7	1.1e-21	76.3	0.7	1.0	1	0	0	1	1	1	1	LSM	domain
SM-ATX	PF14438.6	gi|289597064|ref|YP_003483760.1|	-	0.00032	20.8	0.1	0.00034	20.7	0.1	1.1	1	0	0	1	1	1	1	Ataxin	2	SM	domain
MFS_1	PF07690.16	gi|289597065|ref|YP_003483761.1|	-	6e-27	94.5	72.9	4.6e-22	78.4	39.3	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
dCMP_cyt_deam_1	PF00383.23	gi|289597066|ref|YP_003483762.1|	-	2.9e-16	59.2	3.5	3.5e-16	58.9	3.5	1.1	1	0	0	1	1	1	1	Cytidine	and	deoxycytidylate	deaminase	zinc-binding	region
dCMP_cyt_deam_2	PF08211.12	gi|289597066|ref|YP_003483762.1|	-	8.8e-09	35.7	0.3	8.8e-09	35.7	0.3	1.6	2	0	0	2	2	2	1	Cytidine	and	deoxycytidylate	deaminase	zinc-binding	region
SNAD4	PF18750.1	gi|289597066|ref|YP_003483762.1|	-	0.14	12.2	1.1	0.23	11.6	1.1	1.4	1	1	0	1	1	1	0	Secreted	Novel	AID/APOBEC-like	Deaminase	4
LmjF365940-deam	PF14421.6	gi|289597066|ref|YP_003483762.1|	-	1.3	8.6	4.0	2.6	7.6	0.1	2.1	1	1	1	2	2	2	0	A	distinct	subfamily	of	CDD/CDA-like	deaminases
AAA_32	PF13654.6	gi|289597067|ref|YP_003483763.1|	-	1.1e-17	64.0	0.0	2.8e-09	36.3	0.0	3.1	3	0	0	3	3	3	3	AAA	domain
Mg_chelatase	PF01078.21	gi|289597067|ref|YP_003483763.1|	-	2.1e-15	56.7	0.1	1.5e-09	37.5	0.1	2.4	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
Sigma54_activat	PF00158.26	gi|289597067|ref|YP_003483763.1|	-	2.1e-11	43.8	0.0	1.4e-05	24.8	0.0	2.4	2	0	0	2	2	2	2	Sigma-54	interaction	domain
AAA_5	PF07728.14	gi|289597067|ref|YP_003483763.1|	-	1.4e-09	38.1	0.0	0.00012	22.0	0.0	2.4	2	0	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
AAA	PF00004.29	gi|289597067|ref|YP_003483763.1|	-	6.6e-08	33.1	0.0	0.00013	22.4	0.0	2.4	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.12	gi|289597067|ref|YP_003483763.1|	-	3e-07	30.3	0.0	0.0047	16.7	0.0	2.4	2	0	0	2	2	2	2	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
MCM	PF00493.23	gi|289597067|ref|YP_003483763.1|	-	1.1e-06	27.9	0.0	0.0042	16.2	0.0	2.2	2	0	0	2	2	2	2	MCM	P-loop	domain
AAA_22	PF13401.6	gi|289597067|ref|YP_003483763.1|	-	3.1e-06	27.5	0.0	0.00037	20.8	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
AAA_7	PF12775.7	gi|289597067|ref|YP_003483763.1|	-	0.00027	20.5	0.0	0.00053	19.5	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	dynein	motor	region
Sigma54_activ_2	PF14532.6	gi|289597067|ref|YP_003483763.1|	-	0.00028	21.0	0.0	0.013	15.6	0.0	2.3	2	0	0	2	2	2	1	Sigma-54	interaction	domain
AAA_19	PF13245.6	gi|289597067|ref|YP_003483763.1|	-	0.00053	20.3	0.0	0.31	11.4	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.6	gi|289597067|ref|YP_003483763.1|	-	0.0007	20.0	0.0	0.0036	17.7	0.0	2.0	2	0	0	2	2	2	1	AAA	ATPase	domain
Rad17	PF03215.15	gi|289597067|ref|YP_003483763.1|	-	0.00083	19.3	0.0	0.0028	17.6	0.0	1.7	2	0	0	2	2	2	1	Rad17	P-loop	domain
DUF35_N	PF12172.8	gi|289597067|ref|YP_003483763.1|	-	0.0022	17.8	2.7	0.004	17.0	2.7	1.4	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
IstB_IS21	PF01695.17	gi|289597067|ref|YP_003483763.1|	-	0.0026	17.5	0.0	0.0044	16.8	0.0	1.3	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_3	PF07726.11	gi|289597067|ref|YP_003483763.1|	-	0.0037	17.1	0.0	0.76	9.6	0.0	2.6	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
zinc_ribbon_2	PF13240.6	gi|289597067|ref|YP_003483763.1|	-	0.0043	16.7	5.7	0.0082	15.8	5.7	1.5	1	0	0	1	1	1	1	zinc-ribbon	domain
ABC_tran	PF00005.27	gi|289597067|ref|YP_003483763.1|	-	0.0043	17.6	0.0	0.0091	16.5	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
zf-ribbon_3	PF13248.6	gi|289597067|ref|YP_003483763.1|	-	0.0047	16.3	6.3	0.0094	15.3	6.3	1.5	1	0	0	1	1	1	1	zinc-ribbon	domain
AAA_25	PF13481.6	gi|289597067|ref|YP_003483763.1|	-	0.0072	15.9	0.0	0.021	14.4	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
AAA_30	PF13604.6	gi|289597067|ref|YP_003483763.1|	-	0.0093	15.7	0.0	0.02	14.6	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
TniB	PF05621.11	gi|289597067|ref|YP_003483763.1|	-	0.014	14.8	0.0	0.13	11.6	0.0	2.1	2	0	0	2	2	2	0	Bacterial	TniB	protein
AAA_18	PF13238.6	gi|289597067|ref|YP_003483763.1|	-	0.015	15.9	0.0	0.033	14.7	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
TIP49	PF06068.13	gi|289597067|ref|YP_003483763.1|	-	0.025	13.8	0.1	0.18	11.0	0.0	2.1	2	0	0	2	2	2	0	TIP49	P-loop	domain
HypA	PF01155.19	gi|289597067|ref|YP_003483763.1|	-	0.029	14.4	0.2	0.061	13.3	0.2	1.5	1	0	0	1	1	1	0	Hydrogenase/urease	nickel	incorporation,	metallochaperone,	hypA
DZR	PF12773.7	gi|289597067|ref|YP_003483763.1|	-	0.03	14.4	0.7	0.054	13.5	0.7	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
ResIII	PF04851.15	gi|289597067|ref|YP_003483763.1|	-	0.031	14.3	0.0	0.12	12.4	0.0	1.9	3	0	0	3	3	1	0	Type	III	restriction	enzyme,	res	subunit
AAA_PrkA	PF08298.11	gi|289597067|ref|YP_003483763.1|	-	0.032	13.1	0.0	0.25	10.2	0.0	2.0	2	0	0	2	2	2	0	PrkA	AAA	domain
AAA_14	PF13173.6	gi|289597067|ref|YP_003483763.1|	-	0.035	14.1	0.0	14	5.7	0.0	2.9	2	1	1	3	3	3	0	AAA	domain
PhoH	PF02562.16	gi|289597067|ref|YP_003483763.1|	-	0.041	13.3	0.0	0.072	12.5	0.0	1.3	1	0	0	1	1	1	0	PhoH-like	protein
AAA_24	PF13479.6	gi|289597067|ref|YP_003483763.1|	-	0.044	13.5	0.0	1.7	8.3	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
AAA_29	PF13555.6	gi|289597067|ref|YP_003483763.1|	-	0.045	13.5	0.0	0.097	12.4	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_21	PF13304.6	gi|289597067|ref|YP_003483763.1|	-	0.052	13.4	0.0	1.1	9.0	0.0	2.2	2	0	0	2	2	2	0	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_33	PF13671.6	gi|289597067|ref|YP_003483763.1|	-	0.067	13.4	0.0	0.13	12.4	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.22	gi|289597067|ref|YP_003483763.1|	-	0.072	13.5	0.0	0.24	11.8	0.0	1.9	1	0	0	1	1	1	0	RNA	helicase
Zn-ribbon_8	PF09723.10	gi|289597067|ref|YP_003483763.1|	-	0.078	13.1	3.2	0.2	11.8	3.2	1.7	1	0	0	1	1	1	0	Zinc	ribbon	domain
NACHT	PF05729.12	gi|289597067|ref|YP_003483763.1|	-	0.1	12.5	0.0	0.18	11.7	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
FtsK_SpoIIIE	PF01580.18	gi|289597067|ref|YP_003483763.1|	-	0.11	11.8	0.0	0.19	11.0	0.0	1.3	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
KTI12	PF08433.10	gi|289597067|ref|YP_003483763.1|	-	0.12	11.8	0.0	0.2	11.1	0.0	1.3	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
AAA_28	PF13521.6	gi|289597067|ref|YP_003483763.1|	-	0.13	12.5	0.0	0.3	11.3	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
Guanylate_kin	PF00625.21	gi|289597067|ref|YP_003483763.1|	-	0.14	11.8	0.0	0.27	10.9	0.0	1.4	1	0	0	1	1	1	0	Guanylate	kinase
Parvo_NS1	PF01057.17	gi|289597067|ref|YP_003483763.1|	-	0.18	10.9	0.0	0.32	10.1	0.0	1.3	1	0	0	1	1	1	0	Parvovirus	non-structural	protein	NS1
zf-tcix	PF14952.6	gi|289597067|ref|YP_003483763.1|	-	4	7.1	5.2	7.7	6.2	0.1	2.3	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
Toprim_4	PF13662.6	gi|289597068|ref|YP_003483764.1|	-	2.1e-11	44.1	2.9	2.3e-11	44.0	0.1	2.6	2	2	2	4	4	4	1	Toprim	domain
Toprim_2	PF13155.6	gi|289597068|ref|YP_003483764.1|	-	1.8e-06	28.3	0.0	6.3e-06	26.5	0.0	2.0	1	0	0	1	1	1	1	Toprim-like
Toprim	PF01751.22	gi|289597068|ref|YP_003483764.1|	-	0.0091	16.2	0.3	0.0091	16.2	0.3	3.1	3	2	0	3	3	3	1	Toprim	domain
CmcI	PF04989.12	gi|289597068|ref|YP_003483764.1|	-	0.15	11.7	0.5	1.7	8.3	0.2	2.3	2	0	0	2	2	2	0	Cephalosporin	hydroxylase
Radical_SAM	PF04055.21	gi|289597068|ref|YP_003483764.1|	-	0.41	11.0	2.2	1.3	9.3	0.3	2.6	1	1	1	2	2	2	0	Radical	SAM	superfamily
Ribosomal_60s	PF00428.19	gi|289597068|ref|YP_003483764.1|	-	5.8	7.6	16.6	25	5.6	11.0	3.9	3	1	0	3	3	3	0	60s	Acidic	ribosomal	protein
Ribosomal_S13	PF00416.22	gi|289597069|ref|YP_003483765.1|	-	2.1e-45	154.3	2.6	2.4e-45	154.1	2.6	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S13/S18
FbpA	PF05833.11	gi|289597069|ref|YP_003483765.1|	-	0.009	14.8	0.0	0.01	14.7	0.0	1.1	1	0	0	1	1	1	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
S4	PF01479.25	gi|289597070|ref|YP_003483766.1|	-	3.3e-13	49.1	0.1	3.3e-13	49.1	0.1	1.7	2	0	0	2	2	2	1	S4	domain
Ribosomal_S11	PF00411.19	gi|289597071|ref|YP_003483767.1|	-	2.8e-44	150.0	1.6	3.7e-44	149.6	1.6	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S11
Ribosomal_L18p	PF00861.22	gi|289597071|ref|YP_003483767.1|	-	0.0087	16.4	0.5	0.012	16.0	0.5	1.2	1	0	0	1	1	1	1	Ribosomal	L18	of	archaea,	bacteria,	mitoch.	and	chloroplast
RNA_pol_A_bac	PF01000.26	gi|289597072|ref|YP_003483768.1|	-	3.1e-24	85.5	0.0	2.4e-23	82.6	0.0	2.0	2	0	0	2	2	2	1	RNA	polymerase	Rpb3/RpoA	insert	domain
RNA_pol_L	PF01193.24	gi|289597072|ref|YP_003483768.1|	-	1.1e-18	66.4	0.0	2.6e-18	65.2	0.0	1.6	1	1	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
RNA_pol_L_2	PF13656.6	gi|289597072|ref|YP_003483768.1|	-	0.096	12.5	0.0	3.2	7.6	0.0	2.4	2	0	0	2	2	2	0	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
Esterase_phd	PF10503.9	gi|289597073|ref|YP_003483769.1|	-	1.4e-12	47.6	0.0	2e-12	47.1	0.0	1.1	1	0	0	1	1	1	1	Esterase	PHB	depolymerase
Abhydrolase_2	PF02230.16	gi|289597073|ref|YP_003483769.1|	-	2.7e-09	37.2	0.0	4e-09	36.6	0.0	1.2	1	0	0	1	1	1	1	Phospholipase/Carboxylesterase
Esterase	PF00756.20	gi|289597073|ref|YP_003483769.1|	-	6.6e-07	29.2	0.0	9.1e-07	28.8	0.0	1.2	1	0	0	1	1	1	1	Putative	esterase
Peptidase_S9	PF00326.21	gi|289597073|ref|YP_003483769.1|	-	2.9e-05	23.6	0.0	4.7e-05	23.0	0.0	1.3	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
DLH	PF01738.18	gi|289597073|ref|YP_003483769.1|	-	0.0055	16.3	0.0	0.0084	15.7	0.0	1.2	1	0	0	1	1	1	1	Dienelactone	hydrolase	family
BAAT_C	PF08840.11	gi|289597073|ref|YP_003483769.1|	-	0.032	14.1	0.0	0.046	13.6	0.0	1.2	1	0	0	1	1	1	0	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
Abhydrolase_3	PF07859.13	gi|289597073|ref|YP_003483769.1|	-	0.14	12.0	0.0	5.2	6.9	0.0	2.1	2	0	0	2	2	2	0	alpha/beta	hydrolase	fold
PARM	PF17061.5	gi|289597073|ref|YP_003483769.1|	-	0.29	11.2	4.3	0.43	10.7	4.3	1.1	1	0	0	1	1	1	0	PARM
Radical_SAM	PF04055.21	gi|289597074|ref|YP_003483770.1|	-	7.9e-14	52.4	0.9	1.3e-13	51.7	0.1	1.7	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|289597074|ref|YP_003483770.1|	-	1.5e-08	35.0	0.0	2.9e-08	34.1	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|289597074|ref|YP_003483770.1|	-	0.0002	21.5	0.0	0.00048	20.2	0.0	1.6	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
SPASM	PF13186.6	gi|289597074|ref|YP_003483770.1|	-	0.1	13.1	2.2	0.14	12.7	1.0	1.9	2	0	0	2	2	2	0	Iron-sulfur	cluster-binding	domain
DUF3043	PF11241.8	gi|289597075|ref|YP_003483771.1|	-	0.23	11.5	0.5	0.44	10.6	0.4	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3043)
DUF202	PF02656.15	gi|289597075|ref|YP_003483771.1|	-	0.65	10.5	3.0	1	9.9	3.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF202)
ABC_tran	PF00005.27	gi|289597076|ref|YP_003483772.1|	-	2.6e-33	115.4	0.0	4.1e-33	114.8	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
TOBE	PF03459.17	gi|289597076|ref|YP_003483772.1|	-	9.2e-08	32.3	0.0	2.2e-07	31.1	0.0	1.7	1	0	0	1	1	1	1	TOBE	domain
AAA_21	PF13304.6	gi|289597076|ref|YP_003483772.1|	-	4.4e-07	30.0	0.4	0.015	15.2	0.0	2.3	1	1	1	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
AAA_22	PF13401.6	gi|289597076|ref|YP_003483772.1|	-	0.0015	18.8	0.2	0.0069	16.7	0.2	2.0	1	1	0	1	1	1	1	AAA	domain
SbcCD_C	PF13558.6	gi|289597076|ref|YP_003483772.1|	-	0.0016	18.6	0.0	0.026	14.7	0.0	2.2	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
SMC_N	PF02463.19	gi|289597076|ref|YP_003483772.1|	-	0.002	17.6	0.1	0.74	9.2	0.0	2.3	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
Mg_chelatase	PF01078.21	gi|289597076|ref|YP_003483772.1|	-	0.0052	16.2	0.0	0.017	14.5	0.0	1.8	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
ABC_ATPase	PF09818.9	gi|289597076|ref|YP_003483772.1|	-	0.013	14.4	1.7	9.7	4.9	0.1	3.0	2	1	1	3	3	3	0	Predicted	ATPase	of	the	ABC	class
AAA_23	PF13476.6	gi|289597076|ref|YP_003483772.1|	-	0.014	15.9	0.2	0.014	15.9	0.2	1.9	1	1	1	2	2	2	0	AAA	domain
TOBE_2	PF08402.10	gi|289597076|ref|YP_003483772.1|	-	0.017	15.3	0.0	0.044	13.9	0.0	1.7	1	0	0	1	1	1	0	TOBE	domain
T2SSE	PF00437.20	gi|289597076|ref|YP_003483772.1|	-	0.031	13.3	0.1	0.064	12.3	0.1	1.5	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_29	PF13555.6	gi|289597076|ref|YP_003483772.1|	-	0.032	14.0	0.0	0.069	12.9	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.6	gi|289597076|ref|YP_003483772.1|	-	0.036	14.5	0.0	0.052	13.9	0.0	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_30	PF13604.6	gi|289597076|ref|YP_003483772.1|	-	0.046	13.4	0.0	0.069	12.9	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
NB-ARC	PF00931.22	gi|289597076|ref|YP_003483772.1|	-	0.058	12.6	0.1	0.92	8.6	0.0	2.3	2	0	0	2	2	2	0	NB-ARC	domain
AAA_15	PF13175.6	gi|289597076|ref|YP_003483772.1|	-	0.087	12.5	0.3	0.18	11.5	0.3	1.5	1	1	0	1	1	1	0	AAA	ATPase	domain
cobW	PF02492.19	gi|289597076|ref|YP_003483772.1|	-	0.1	12.2	0.1	0.2	11.2	0.1	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
NACHT	PF05729.12	gi|289597076|ref|YP_003483772.1|	-	0.1	12.5	0.1	0.27	11.2	0.1	1.6	1	0	0	1	1	1	0	NACHT	domain
IstB_IS21	PF01695.17	gi|289597076|ref|YP_003483772.1|	-	0.16	11.6	0.1	0.55	9.9	0.0	1.8	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA	PF00004.29	gi|289597076|ref|YP_003483772.1|	-	0.31	11.5	1.4	2.4	8.6	1.4	2.2	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
BPD_transp_1	PF00528.22	gi|289597077|ref|YP_003483773.1|	-	4.3e-22	78.8	15.7	4.3e-22	78.8	15.7	3.2	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
SBP_bac_11	PF13531.6	gi|289597078|ref|YP_003483774.1|	-	2e-34	119.3	0.0	2.6e-34	119.0	0.0	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_1	PF01547.25	gi|289597078|ref|YP_003483774.1|	-	3.1e-08	34.0	3.0	6.3e-08	32.9	3.0	1.5	1	1	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_8	PF13416.6	gi|289597078|ref|YP_003483774.1|	-	0.013	15.3	1.1	2.9	7.6	0.0	2.5	2	1	0	2	2	2	0	Bacterial	extracellular	solute-binding	protein
EamA	PF00892.20	gi|289597079|ref|YP_003483775.1|	-	2.1e-10	40.9	21.2	2.3e-10	40.8	21.2	1.0	1	0	0	1	1	1	1	EamA-like	transporter	family
SID-1_RNA_chan	PF13965.6	gi|289597079|ref|YP_003483775.1|	-	0.51	8.7	10.1	0.0095	14.4	3.0	1.6	1	1	1	2	2	2	0	dsRNA-gated	channel	SID-1
LigB	PF02900.18	gi|289597080|ref|YP_003483776.1|	-	3.7e-16	59.0	0.0	4.5e-16	58.7	0.0	1.0	1	0	0	1	1	1	1	Catalytic	LigB	subunit	of	aromatic	ring-opening	dioxygenase
Memo	PF01875.17	gi|289597080|ref|YP_003483776.1|	-	0.08	12.1	0.1	0.23	10.6	0.0	1.7	2	0	0	2	2	2	0	Memo-like	protein
AAA_32	PF13654.6	gi|289597081|ref|YP_003483777.1|	-	8e-34	117.3	0.3	8.4e-25	87.5	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
Lon_C	PF05362.13	gi|289597081|ref|YP_003483777.1|	-	4.4e-32	111.3	4.4	7.5e-32	110.5	4.4	1.4	1	0	0	1	1	1	1	Lon	protease	(S16)	C-terminal	proteolytic	domain
Mg_chelatase	PF01078.21	gi|289597081|ref|YP_003483777.1|	-	3.6e-16	59.2	0.0	7.1e-09	35.3	0.0	2.3	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
Sigma54_activat	PF00158.26	gi|289597081|ref|YP_003483777.1|	-	5.5e-15	55.5	0.0	6.1e-08	32.5	0.0	2.6	2	0	0	2	2	2	2	Sigma-54	interaction	domain
AAA_5	PF07728.14	gi|289597081|ref|YP_003483777.1|	-	4.2e-11	43.0	0.0	8.4e-05	22.6	0.0	2.6	2	0	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
MCM	PF00493.23	gi|289597081|ref|YP_003483777.1|	-	4e-10	39.2	0.0	0.00014	21.0	0.0	2.5	2	0	0	2	2	2	2	MCM	P-loop	domain
ChlI	PF13541.6	gi|289597081|ref|YP_003483777.1|	-	3e-09	36.7	0.3	7.8e-09	35.4	0.3	1.7	1	0	0	1	1	1	1	Subunit	ChlI	of	Mg-chelatase
AAA_7	PF12775.7	gi|289597081|ref|YP_003483777.1|	-	1.7e-06	27.7	0.0	0.00031	20.3	0.0	2.7	2	1	0	2	2	2	1	P-loop	containing	dynein	motor	region
RuvB_N	PF05496.12	gi|289597081|ref|YP_003483777.1|	-	9.8e-06	25.4	0.0	0.072	12.8	0.0	2.5	2	0	0	2	2	2	2	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
AAA_22	PF13401.6	gi|289597081|ref|YP_003483777.1|	-	1.6e-05	25.2	0.0	0.00066	20.0	0.0	2.6	2	0	0	2	2	2	1	AAA	domain
AAA	PF00004.29	gi|289597081|ref|YP_003483777.1|	-	1.6e-05	25.3	0.0	0.43	11.0	0.0	3.0	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_19	PF13245.6	gi|289597081|ref|YP_003483777.1|	-	3.3e-05	24.3	0.0	0.52	10.6	0.0	2.7	2	1	1	3	3	2	2	AAA	domain
Sigma54_activ_2	PF14532.6	gi|289597081|ref|YP_003483777.1|	-	7.9e-05	22.8	0.0	0.38	10.9	0.0	2.4	2	0	0	2	2	2	2	Sigma-54	interaction	domain
TIP49	PF06068.13	gi|289597081|ref|YP_003483777.1|	-	8.6e-05	21.9	1.2	0.15	11.2	0.0	3.3	4	0	0	4	4	4	2	TIP49	P-loop	domain
AAA_3	PF07726.11	gi|289597081|ref|YP_003483777.1|	-	9e-05	22.3	0.0	0.016	15.0	0.0	2.5	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
NACHT	PF05729.12	gi|289597081|ref|YP_003483777.1|	-	0.0007	19.5	0.0	0.0016	18.4	0.0	1.6	1	0	0	1	1	1	1	NACHT	domain
AAA_30	PF13604.6	gi|289597081|ref|YP_003483777.1|	-	0.0017	18.1	0.0	0.18	11.5	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
PhoH	PF02562.16	gi|289597081|ref|YP_003483777.1|	-	0.0043	16.5	0.0	0.012	15.1	0.0	1.7	1	0	0	1	1	1	1	PhoH-like	protein
AAA_16	PF13191.6	gi|289597081|ref|YP_003483777.1|	-	0.0055	17.1	0.0	0.1	13.0	0.0	2.3	2	0	0	2	2	2	1	AAA	ATPase	domain
Ribosomal_L18_c	PF14204.6	gi|289597081|ref|YP_003483777.1|	-	0.015	16.2	0.0	0.015	16.2	0.0	2.6	3	0	0	3	3	2	0	Ribosomal	L18	C-terminal	region
DUF2207	PF09972.9	gi|289597081|ref|YP_003483777.1|	-	0.018	13.8	0.1	0.038	12.8	0.1	1.4	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
AAA_10	PF12846.7	gi|289597081|ref|YP_003483777.1|	-	0.024	13.6	1.6	0.028	13.3	0.0	1.8	2	0	0	2	2	2	0	AAA-like	domain
NapE	PF06796.11	gi|289597081|ref|YP_003483777.1|	-	0.043	13.3	0.8	0.12	11.9	0.8	1.7	1	0	0	1	1	1	0	Periplasmic	nitrate	reductase	protein	NapE
AAA_PrkA	PF08298.11	gi|289597081|ref|YP_003483777.1|	-	0.045	12.7	0.1	4.8	6.0	0.0	2.5	2	0	0	2	2	2	0	PrkA	AAA	domain
IstB_IS21	PF01695.17	gi|289597081|ref|YP_003483777.1|	-	0.045	13.5	0.0	0.23	11.2	0.0	2.2	3	0	0	3	3	2	0	IstB-like	ATP	binding	protein
MCM_lid	PF17855.1	gi|289597081|ref|YP_003483777.1|	-	0.052	14.0	0.6	0.14	12.6	0.1	2.0	2	0	0	2	2	1	0	MCM	AAA-lid	domain
T2SSE	PF00437.20	gi|289597081|ref|YP_003483777.1|	-	0.054	12.6	0.0	0.11	11.6	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
DUF2075	PF09848.9	gi|289597081|ref|YP_003483777.1|	-	0.084	12.1	0.0	0.15	11.2	0.0	1.4	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_25	PF13481.6	gi|289597081|ref|YP_003483777.1|	-	0.11	12.1	0.0	0.37	10.3	0.0	1.9	1	0	0	1	1	1	0	AAA	domain
TniB	PF05621.11	gi|289597081|ref|YP_003483777.1|	-	0.15	11.5	1.9	3.2	7.1	0.0	2.9	2	1	1	3	3	3	0	Bacterial	TniB	protein
ResIII	PF04851.15	gi|289597081|ref|YP_003483777.1|	-	0.15	12.0	0.4	0.62	10.1	0.1	2.1	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
AAA_33	PF13671.6	gi|289597081|ref|YP_003483777.1|	-	0.18	12.0	0.0	0.42	10.8	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
DUF87	PF01935.17	gi|289597081|ref|YP_003483777.1|	-	0.29	11.2	1.8	13	5.8	0.0	3.0	4	0	0	4	4	3	0	Helicase	HerA,	central	domain
CGI-121	PF08617.10	gi|289597082|ref|YP_003483778.1|	-	0.0015	18.6	0.0	0.0017	18.5	0.0	1.1	1	0	0	1	1	1	1	Kinase	binding	protein	CGI-121
DUF2039	PF10217.9	gi|289597082|ref|YP_003483778.1|	-	0.024	14.9	0.1	0.037	14.4	0.1	1.3	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2039)
TGT	PF01702.18	gi|289597083|ref|YP_003483779.1|	-	1.8e-134	448.3	0.0	2.2e-134	448.0	0.0	1.0	1	0	0	1	1	1	1	Queuine	tRNA-ribosyltransferase
RcbX	PF02341.15	gi|289597083|ref|YP_003483779.1|	-	0.25	11.6	0.8	0.54	10.6	0.8	1.4	1	0	0	1	1	1	0	RbcX	protein
Mak16	PF04874.14	gi|289597084|ref|YP_003483780.1|	-	0.027	15.0	0.2	0.044	14.4	0.2	1.2	1	0	0	1	1	1	0	Mak16	protein	C-terminal	region
DUF809	PF05663.11	gi|289597084|ref|YP_003483780.1|	-	0.24	11.6	0.4	0.84	9.8	0.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF809)
Ribosomal_S8e	PF01201.22	gi|289597085|ref|YP_003483781.1|	-	3.8e-36	124.3	0.5	4.4e-36	124.1	0.5	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S8e
SRP19	PF01922.17	gi|289597086|ref|YP_003483782.1|	-	1.6e-21	77.0	0.3	1.9e-21	76.8	0.3	1.1	1	0	0	1	1	1	1	SRP19	protein
DUF211	PF02680.14	gi|289597087|ref|YP_003483783.1|	-	9.2e-38	128.3	4.0	1e-37	128.1	4.0	1.0	1	0	0	1	1	1	1	Uncharacterized	ArCR,	COG1888
CdhC	PF03598.15	gi|289597087|ref|YP_003483783.1|	-	0.076	12.9	0.7	0.084	12.7	0.7	1.1	1	0	0	1	1	1	0	CO	dehydrogenase/acetyl-CoA	synthase	complex	beta	subunit
DUF4506	PF14958.6	gi|289597087|ref|YP_003483783.1|	-	0.091	12.3	0.0	0.12	11.9	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4506)
Macro	PF01661.21	gi|289597088|ref|YP_003483784.1|	-	5.5e-40	136.1	0.4	1.8e-39	134.4	0.1	1.8	2	0	0	2	2	2	1	Macro	domain
Glyco_hydro_25	PF01183.20	gi|289597089|ref|YP_003483785.1|	-	2.8e-52	177.5	3.0	2.8e-52	177.5	3.0	2.0	2	0	0	2	2	2	1	Glycosyl	hydrolases	family	25
Amidase_6	PF12671.7	gi|289597089|ref|YP_003483785.1|	-	1.3e-15	57.9	5.1	1.3e-15	57.9	5.1	2.4	3	0	0	3	3	3	1	Putative	amidase	domain
SH3_3	PF08239.11	gi|289597089|ref|YP_003483785.1|	-	3.7e-12	46.3	5.8	2.8e-09	37.1	0.5	3.9	4	0	0	4	4	4	2	Bacterial	SH3	domain
Pribosyltran	PF00156.27	gi|289597090|ref|YP_003483786.1|	-	9e-19	67.5	0.0	1.6e-18	66.8	0.0	1.3	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
GerE	PF00196.19	gi|289597090|ref|YP_003483786.1|	-	0.00049	19.6	0.1	0.0011	18.4	0.0	1.6	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	luxR	family
UPRTase	PF14681.6	gi|289597090|ref|YP_003483786.1|	-	0.0013	18.2	0.0	0.0019	17.7	0.0	1.3	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
Sigma70_r4_2	PF08281.12	gi|289597090|ref|YP_003483786.1|	-	0.0015	18.2	0.1	0.004	16.8	0.0	1.8	2	0	0	2	2	2	1	Sigma-70,	region	4
PRTase_2	PF15609.6	gi|289597090|ref|YP_003483786.1|	-	0.0025	17.3	0.0	0.0038	16.8	0.0	1.2	1	0	0	1	1	1	1	Phosphoribosyl	transferase
HTH_40	PF14493.6	gi|289597090|ref|YP_003483786.1|	-	0.0066	16.9	0.2	0.02	15.3	0.1	1.8	2	1	0	2	2	2	1	Helix-turn-helix	domain
Zeta_toxin	PF06414.12	gi|289597090|ref|YP_003483786.1|	-	0.015	14.6	0.1	0.031	13.5	0.0	1.5	2	0	0	2	2	2	0	Zeta	toxin
HTH_11	PF08279.12	gi|289597090|ref|YP_003483786.1|	-	0.017	15.1	0.7	2.9	7.9	0.2	3.2	3	0	0	3	3	3	0	HTH	domain
HTH_23	PF13384.6	gi|289597090|ref|YP_003483786.1|	-	0.036	13.9	0.0	0.11	12.3	0.0	1.9	2	0	0	2	2	2	0	Homeodomain-like	domain
TnsD	PF15978.5	gi|289597090|ref|YP_003483786.1|	-	0.046	12.7	0.0	0.065	12.2	0.0	1.1	1	0	0	1	1	1	0	Tn7-like	transposition	protein	D
HTH_30	PF13556.6	gi|289597090|ref|YP_003483786.1|	-	0.15	11.9	0.0	3.4	7.6	0.0	2.4	2	0	0	2	2	2	0	PucR	C-terminal	helix-turn-helix	domain
HTH_Tnp_ISL3	PF13542.6	gi|289597090|ref|YP_003483786.1|	-	0.17	11.4	0.0	0.42	10.0	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	transposase	family	ISL3
Terminase_5	PF06056.12	gi|289597090|ref|YP_003483786.1|	-	0.17	11.8	0.1	0.81	9.6	0.0	2.1	2	0	0	2	2	2	0	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_3	PF01381.22	gi|289597092|ref|YP_003483788.1|	-	8e-16	57.8	2.6	1.4e-15	57.0	2.6	1.5	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.7	gi|289597092|ref|YP_003483788.1|	-	2.4e-08	33.9	1.6	5.1e-08	32.8	1.6	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_31	PF13560.6	gi|289597092|ref|YP_003483788.1|	-	6.6e-06	26.4	0.0	1.7e-05	25.1	0.0	1.6	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_25	PF13413.6	gi|289597092|ref|YP_003483788.1|	-	0.00036	20.3	0.8	0.0009	19.1	0.8	1.8	1	1	0	1	1	1	1	Helix-turn-helix	domain
DUF4428	PF14471.6	gi|289597092|ref|YP_003483788.1|	-	0.0028	17.5	0.5	0.0028	17.5	0.5	2.2	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4428)
MqsA_antitoxin	PF15731.5	gi|289597092|ref|YP_003483788.1|	-	0.0056	16.8	3.7	0.013	15.6	1.4	2.3	1	1	0	1	1	1	1	Antitoxin	component	of	bacterial	toxin-antitoxin	system,	MqsA
zf-C4_ClpX	PF06689.13	gi|289597092|ref|YP_003483788.1|	-	0.0086	15.9	2.2	0.018	14.9	2.2	1.5	1	0	0	1	1	1	1	ClpX	C4-type	zinc	finger
SUKH_5	PF14567.6	gi|289597092|ref|YP_003483788.1|	-	0.18	11.5	1.2	0.71	9.6	0.5	2.1	1	1	2	3	3	3	0	SMI1-KNR4	cell-wall
XkdW	PF09636.10	gi|289597092|ref|YP_003483788.1|	-	0.78	9.9	4.3	0.77	9.9	0.2	2.3	1	1	0	2	2	2	0	XkdW	protein
Aminotran_5	PF00266.19	gi|289597093|ref|YP_003483789.1|	-	5.6e-35	121.0	0.2	6.9e-35	120.7	0.2	1.0	1	0	0	1	1	1	1	Aminotransferase	class-V
TetR_N	PF00440.23	gi|289597093|ref|YP_003483789.1|	-	0.014	15.2	0.0	0.044	13.6	0.0	1.9	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	tetR	family
2-Hacid_dh_C	PF02826.19	gi|289597094|ref|YP_003483790.1|	-	2.1e-72	242.2	0.0	4e-72	241.3	0.0	1.5	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.30	gi|289597094|ref|YP_003483790.1|	-	1.9e-33	115.0	0.1	2.1e-33	114.8	0.1	1.0	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
NAD_binding_2	PF03446.15	gi|289597094|ref|YP_003483790.1|	-	2.7e-08	34.1	0.1	8.8e-08	32.5	0.0	1.8	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
AlaDh_PNT_C	PF01262.21	gi|289597094|ref|YP_003483790.1|	-	6.3e-05	22.4	0.1	0.00021	20.7	0.1	1.8	1	1	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
IlvN	PF07991.12	gi|289597094|ref|YP_003483790.1|	-	0.00036	20.1	0.1	0.0012	18.4	0.0	1.9	2	1	0	2	2	2	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
UPF0180	PF03698.13	gi|289597094|ref|YP_003483790.1|	-	0.0028	17.8	0.1	0.04	14.1	0.0	2.6	2	1	0	2	2	2	1	Uncharacterised	protein	family	(UPF0180)
AdoHcyase_NAD	PF00670.21	gi|289597094|ref|YP_003483790.1|	-	0.0034	17.5	0.1	0.0092	16.1	0.0	1.7	2	0	0	2	2	2	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
F420_oxidored	PF03807.17	gi|289597094|ref|YP_003483790.1|	-	0.0058	17.2	0.0	0.013	16.0	0.0	1.7	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
GFO_IDH_MocA	PF01408.22	gi|289597094|ref|YP_003483790.1|	-	0.0079	17.0	0.0	3.8	8.4	0.0	2.4	2	0	0	2	2	2	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
3HCDH_N	PF02737.18	gi|289597094|ref|YP_003483790.1|	-	0.013	15.4	0.0	0.032	14.1	0.0	1.7	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Nitro_FeMo-Co	PF02579.17	gi|289597094|ref|YP_003483790.1|	-	0.077	13.3	0.8	1.7	9.0	0.1	3.3	4	0	0	4	4	4	0	Dinitrogenase	iron-molybdenum	cofactor
DUF1015	PF06245.11	gi|289597095|ref|YP_003483791.1|	-	8.9e-114	380.4	4.2	1e-113	380.2	4.2	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1015)
Gln-synt_C	PF00120.24	gi|289597096|ref|YP_003483792.1|	-	3.1e-100	335.5	0.0	4.4e-100	335.0	0.0	1.2	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.19	gi|289597096|ref|YP_003483792.1|	-	3e-18	65.3	0.0	8.4e-18	63.9	0.0	1.8	2	0	0	2	2	2	1	Glutamine	synthetase,	beta-Grasp	domain
Lactamase_B_2	PF12706.7	gi|289597097|ref|YP_003483793.1|	-	4.2e-21	75.4	0.0	5.7e-19	68.4	0.0	2.1	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.27	gi|289597097|ref|YP_003483793.1|	-	1.1e-10	41.8	0.0	3.2e-09	37.1	0.0	2.2	2	0	0	2	2	2	1	Metallo-beta-lactamase	superfamily
Lactamase_B_4	PF13691.6	gi|289597097|ref|YP_003483793.1|	-	1.7e-07	30.8	0.0	3.1e-07	30.0	0.0	1.4	1	0	0	1	1	1	1	tRNase	Z	endonuclease
PDEase_II	PF02112.15	gi|289597097|ref|YP_003483793.1|	-	6.1e-05	22.3	0.0	8.5e-05	21.8	0.0	1.3	1	0	0	1	1	1	1	cAMP	phosphodiesterases	class-II
Nitro_FeMo-Co	PF02579.17	gi|289597097|ref|YP_003483793.1|	-	0.12	12.7	0.1	0.48	10.8	0.0	2.0	2	0	0	2	2	2	0	Dinitrogenase	iron-molybdenum	cofactor
tRNA-synt_1b	PF00579.25	gi|289597098|ref|YP_003483794.1|	-	5.3e-43	147.4	0.0	6.5e-25	88.0	0.0	2.1	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(W	and	Y)
DUF4003	PF13170.6	gi|289597098|ref|YP_003483794.1|	-	0.14	11.5	0.1	0.26	10.7	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4003)
Toprim	PF01751.22	gi|289597099|ref|YP_003483795.1|	-	2.6e-06	27.6	0.1	1.1e-05	25.6	0.1	1.9	1	1	0	1	1	1	1	Toprim	domain
Toprim_4	PF13662.6	gi|289597099|ref|YP_003483795.1|	-	1.3e-05	25.5	0.0	3e-05	24.4	0.0	1.6	2	0	0	2	2	2	1	Toprim	domain
Toprim_2	PF13155.6	gi|289597099|ref|YP_003483795.1|	-	0.0015	18.9	0.0	0.0022	18.4	0.0	1.2	1	0	0	1	1	1	1	Toprim-like
TFA2_Winged_2	PF18121.1	gi|289597099|ref|YP_003483795.1|	-	0.082	12.6	0.5	6.4	6.5	0.1	2.5	1	1	1	2	2	2	0	TFA2	Winged	helix	domain	2
Toprim_3	PF13362.6	gi|289597099|ref|YP_003483795.1|	-	0.11	12.8	0.0	0.16	12.3	0.0	1.2	1	0	0	1	1	1	0	Toprim	domain
Methyltransf_25	PF13649.6	gi|289597100|ref|YP_003483796.1|	-	1e-14	55.0	0.0	1.7e-14	54.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.6	gi|289597100|ref|YP_003483796.1|	-	2.1e-11	43.9	0.1	2.5e-11	43.6	0.1	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.12	gi|289597100|ref|YP_003483796.1|	-	8.7e-11	42.3	0.0	1.4e-10	41.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.12	gi|289597100|ref|YP_003483796.1|	-	3.7e-06	27.6	0.0	6.3e-06	26.9	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.18	gi|289597100|ref|YP_003483796.1|	-	9.3e-06	25.1	0.0	1.4e-05	24.5	0.0	1.3	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_23	PF13489.6	gi|289597100|ref|YP_003483796.1|	-	2.1e-05	24.4	0.0	3.7e-05	23.6	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.14	gi|289597100|ref|YP_003483796.1|	-	0.0017	17.9	0.0	0.0056	16.3	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	small	domain
MethyltransfD12	PF02086.15	gi|289597100|ref|YP_003483796.1|	-	0.013	15.2	0.0	0.029	14.0	0.0	1.5	1	0	0	1	1	1	0	D12	class	N6	adenine-specific	DNA	methyltransferase
Adenosine_kin	PF04008.14	gi|289597101|ref|YP_003483797.1|	-	2.5e-71	238.5	0.3	2.8e-71	238.3	0.3	1.0	1	0	0	1	1	1	1	Adenosine	specific	kinase
DUF5321	PF17254.2	gi|289597101|ref|YP_003483797.1|	-	0.094	12.2	0.1	0.12	11.8	0.1	1.1	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF5321)
FGGY_N	PF00370.21	gi|289597102|ref|YP_003483798.1|	-	9e-83	277.6	0.0	1.8e-82	276.6	0.0	1.5	1	0	0	1	1	1	1	FGGY	family	of	carbohydrate	kinases,	N-terminal	domain
FGGY_C	PF02782.16	gi|289597102|ref|YP_003483798.1|	-	3e-53	180.5	0.0	3.8e-52	176.9	0.0	2.1	2	0	0	2	2	2	1	FGGY	family	of	carbohydrate	kinases,	C-terminal	domain
BcrAD_BadFG	PF01869.20	gi|289597102|ref|YP_003483798.1|	-	0.045	13.2	0.1	4.7	6.6	0.1	2.2	2	0	0	2	2	2	0	BadF/BadG/BcrA/BcrD	ATPase	family
ArlS_N	PF18719.1	gi|289597102|ref|YP_003483798.1|	-	0.11	12.7	0.3	1.5	9.1	0.1	2.4	1	1	1	2	2	2	0	ArlS	sensor	domain
Tex_YqgF	PF16921.5	gi|289597102|ref|YP_003483798.1|	-	0.14	12.6	0.3	1.1	9.7	0.0	2.4	2	1	1	3	3	3	0	Tex	protein	YqgF-like	domain
V4R	PF02830.18	gi|289597103|ref|YP_003483799.1|	-	2.9e-13	49.6	0.3	5e-13	48.9	0.3	1.4	1	0	0	1	1	1	1	V4R	domain
Mtf2_C	PF14061.6	gi|289597103|ref|YP_003483799.1|	-	0.053	13.7	0.3	0.15	12.3	0.0	1.9	2	0	0	2	2	2	0	Polycomb-like	MTF2	factor	2
GH115_C	PF17829.1	gi|289597104|ref|YP_003483800.1|	-	0.074	12.9	2.7	0.25	11.2	0.0	2.7	3	1	0	3	3	3	0	Gylcosyl	hydrolase	family	115	C-terminal	domain
tRNA_SAD	PF07973.14	gi|289597105|ref|YP_003483801.1|	-	4.8e-07	29.8	0.2	1.3e-06	28.4	0.2	1.8	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
tRNA-synt_2c	PF01411.19	gi|289597105|ref|YP_003483801.1|	-	6.9e-05	21.6	0.0	0.00023	19.8	0.0	1.7	2	0	0	2	2	2	1	tRNA	synthetases	class	II	(A)
Nop53	PF07767.11	gi|289597105|ref|YP_003483801.1|	-	0.0048	16.4	0.1	0.0072	15.8	0.1	1.2	1	0	0	1	1	1	1	Nop53	(60S	ribosomal	biogenesis)
Peptidase_M42	PF05343.14	gi|289597106|ref|YP_003483802.1|	-	6.8e-87	291.2	0.0	7.9e-87	291.0	0.0	1.0	1	0	0	1	1	1	1	M42	glutamyl	aminopeptidase
Peptidase_M20	PF01546.28	gi|289597106|ref|YP_003483802.1|	-	1.4e-09	37.9	0.0	2.9e-09	36.9	0.0	1.5	2	0	0	2	2	2	1	Peptidase	family	M20/M25/M40
Peptidase_M28	PF04389.17	gi|289597106|ref|YP_003483802.1|	-	2.6e-07	30.5	0.1	4.2e-05	23.3	0.0	2.3	2	1	0	2	2	2	2	Peptidase	family	M28
Peptidase_M18	PF02127.15	gi|289597106|ref|YP_003483802.1|	-	0.046	12.5	0.0	0.078	11.7	0.0	1.3	1	0	0	1	1	1	0	Aminopeptidase	I	zinc	metalloprotease	(M18)
Aminotran_1_2	PF00155.21	gi|289597107|ref|YP_003483803.1|	-	6.9e-38	130.8	0.0	8.7e-38	130.4	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_MocR	PF12897.7	gi|289597107|ref|YP_003483803.1|	-	1.4e-11	43.9	0.0	2.8e-11	42.9	0.0	1.4	1	1	0	1	1	1	1	Alanine-glyoxylate	amino-transferase
Beta_elim_lyase	PF01212.21	gi|289597107|ref|YP_003483803.1|	-	0.0036	16.6	0.0	0.0055	16.0	0.0	1.2	1	0	0	1	1	1	1	Beta-eliminating	lyase
DegT_DnrJ_EryC1	PF01041.17	gi|289597107|ref|YP_003483803.1|	-	0.099	11.9	0.0	0.24	10.7	0.0	1.6	1	1	0	1	1	1	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Gln-synt_C	PF00120.24	gi|289597108|ref|YP_003483804.1|	-	6e-132	439.8	0.0	7e-132	439.6	0.0	1.0	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.19	gi|289597108|ref|YP_003483804.1|	-	2.9e-23	81.4	0.1	8.3e-23	79.9	0.1	1.8	2	0	0	2	2	2	1	Glutamine	synthetase,	beta-Grasp	domain
Gln-synt_N_2	PF16952.5	gi|289597108|ref|YP_003483804.1|	-	0.0002	21.2	0.0	0.00064	19.5	0.0	1.8	1	1	0	1	1	1	1	Glutamine	synthetase	N-terminal	domain
Pyridoxal_deC	PF00282.19	gi|289597109|ref|YP_003483805.1|	-	1.3e-29	103.1	0.0	6.6e-29	100.8	0.0	1.9	1	1	0	1	1	1	1	Pyridoxal-dependent	decarboxylase	conserved	domain
Aminotran_5	PF00266.19	gi|289597109|ref|YP_003483805.1|	-	1.7e-07	30.6	0.0	2.8e-07	29.8	0.0	1.4	1	0	0	1	1	1	1	Aminotransferase	class-V
Aminotran_1_2	PF00155.21	gi|289597109|ref|YP_003483805.1|	-	8.6e-06	25.1	0.0	2.8e-05	23.5	0.0	1.7	2	0	0	2	2	2	1	Aminotransferase	class	I	and	II
Beta_elim_lyase	PF01212.21	gi|289597109|ref|YP_003483805.1|	-	8.1e-05	22.0	0.0	0.00014	21.3	0.0	1.3	1	0	0	1	1	1	1	Beta-eliminating	lyase
TPP_enzyme_C	PF02775.21	gi|289597110|ref|YP_003483806.1|	-	7.5e-26	90.7	0.4	1.1e-25	90.2	0.4	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
DXP_synthase_N	PF13292.6	gi|289597110|ref|YP_003483806.1|	-	0.00013	21.2	0.5	0.00021	20.6	0.5	1.4	1	1	0	1	1	1	1	1-deoxy-D-xylulose-5-phosphate	synthase
POR_N	PF01855.19	gi|289597111|ref|YP_003483807.1|	-	4e-71	239.4	0.1	5.3e-71	239.0	0.1	1.2	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
PFOR_II	PF17147.4	gi|289597111|ref|YP_003483807.1|	-	9e-31	106.2	0.0	1.9e-30	105.2	0.0	1.6	1	0	0	1	1	1	1	Pyruvate:ferredoxin	oxidoreductase	core	domain	II
Transketolase_C	PF02780.20	gi|289597111|ref|YP_003483807.1|	-	6.6e-11	42.2	0.0	5.2e-10	39.3	0.0	2.2	2	0	0	2	2	2	1	Transketolase,	C-terminal	domain
nlz1	PF12402.8	gi|289597111|ref|YP_003483807.1|	-	0.07	13.6	0.0	0.24	11.9	0.0	1.9	1	0	0	1	1	1	0	NocA-like	zinc-finger	protein	1
Fer4	PF00037.27	gi|289597112|ref|YP_003483808.1|	-	6.1e-14	51.2	17.5	6.1e-08	32.2	6.6	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.6	gi|289597112|ref|YP_003483808.1|	-	5.6e-10	39.2	7.3	0.00014	21.9	0.9	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.7	gi|289597112|ref|YP_003483808.1|	-	2.7e-09	36.7	14.2	1.8e-06	27.7	4.9	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.7	gi|289597112|ref|YP_003483808.1|	-	6.6e-09	35.3	12.4	0.0003	20.7	3.7	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.6	gi|289597112|ref|YP_003483808.1|	-	1.4e-08	34.7	7.9	4.9e-08	33.0	7.9	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.7	gi|289597112|ref|YP_003483808.1|	-	2.3e-08	34.5	7.1	6.4e-08	33.1	7.4	1.6	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.6	gi|289597112|ref|YP_003483808.1|	-	2.8e-07	30.6	16.0	4.4e-06	26.8	8.2	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.6	gi|289597112|ref|YP_003483808.1|	-	1.1e-06	29.5	7.7	0.0015	19.4	1.8	2.3	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_13	PF13370.6	gi|289597112|ref|YP_003483808.1|	-	1.2e-06	29.0	7.2	0.00037	21.0	0.3	2.4	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain	of	Ferredoxin	I
Fer4_8	PF13183.6	gi|289597112|ref|YP_003483808.1|	-	0.0001	22.7	7.8	0.00026	21.4	7.8	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_15	PF13459.6	gi|289597112|ref|YP_003483808.1|	-	0.00015	22.4	9.0	0.046	14.4	3.5	2.7	2	1	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_17	PF13534.6	gi|289597112|ref|YP_003483808.1|	-	0.001	19.6	8.6	0.004	17.7	8.7	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.7	gi|289597112|ref|YP_003483808.1|	-	0.0041	17.5	12.0	0.062	13.8	3.8	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_22	PF17179.4	gi|289597112|ref|YP_003483808.1|	-	0.025	15.4	7.5	0.26	12.2	1.2	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
POR	PF01558.18	gi|289597113|ref|YP_003483809.1|	-	1.5e-36	126.1	2.5	1.7e-36	125.9	2.5	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
Peptidase_M20	PF01546.28	gi|289597114|ref|YP_003483810.1|	-	2.3e-33	115.6	0.1	3.3e-33	115.1	0.1	1.3	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.14	gi|289597114|ref|YP_003483810.1|	-	1.1e-17	63.9	0.5	4.4e-17	62.0	0.1	2.2	3	0	0	3	3	3	1	Peptidase	dimerisation	domain
Peptidase_M28	PF04389.17	gi|289597114|ref|YP_003483810.1|	-	6.4e-06	26.0	0.0	1.9e-05	24.5	0.0	1.8	2	0	0	2	2	2	1	Peptidase	family	M28
YicC_N	PF03755.13	gi|289597114|ref|YP_003483810.1|	-	0.03	14.8	0.0	0.21	12.0	0.0	2.0	2	0	0	2	2	2	0	YicC-like	family,	N-terminal	region
Glyco_trans_1_3	PF13528.6	gi|289597115|ref|YP_003483811.1|	-	5.9e-17	61.9	0.0	4.4e-12	45.9	0.0	2.2	2	0	0	2	2	2	2	Glycosyl	transferase	family	1
Glyco_tran_28_C	PF04101.16	gi|289597115|ref|YP_003483811.1|	-	5.2e-11	42.8	0.0	1.2e-10	41.7	0.0	1.5	1	0	0	1	1	1	1	Glycosyltransferase	family	28	C-terminal	domain
Glyco_transf_4	PF13439.6	gi|289597115|ref|YP_003483811.1|	-	0.0034	17.4	1.4	0.0044	17.0	0.2	1.8	2	0	0	2	2	2	1	Glycosyltransferase	Family	4
Head_binding	PF09008.10	gi|289597115|ref|YP_003483811.1|	-	0.11	12.8	0.0	6.5	7.1	0.0	2.4	2	0	0	2	2	2	0	Head	binding
LPG_synthase_TM	PF03706.13	gi|289597116|ref|YP_003483812.1|	-	3.1e-47	161.6	20.8	3.5e-47	161.4	20.8	1.0	1	0	0	1	1	1	1	Lysylphosphatidylglycerol	synthase	TM	region
Glyco_transf_4	PF13439.6	gi|289597116|ref|YP_003483812.1|	-	0.27	11.2	0.4	0.75	9.8	0.0	1.8	2	0	0	2	2	2	0	Glycosyltransferase	Family	4
DUF2070	PF09843.9	gi|289597117|ref|YP_003483813.1|	-	2.2e-142	475.3	13.0	2.6e-142	475.0	13.0	1.0	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2070)
RAMPs	PF03787.15	gi|289597117|ref|YP_003483813.1|	-	3.1	7.8	5.3	3.9	7.5	3.7	1.8	1	1	1	2	2	2	0	RAMP	superfamily
DUF72	PF01904.18	gi|289597118|ref|YP_003483814.1|	-	6.4e-30	104.9	0.0	8.1e-30	104.6	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF72
Peptidase_M50	PF02163.22	gi|289597119|ref|YP_003483815.1|	-	6.4e-15	55.1	7.0	2.3e-07	30.3	2.7	2.7	1	1	1	2	2	2	2	Peptidase	family	M50
tRNA-synt_2c	PF01411.19	gi|289597120|ref|YP_003483816.1|	-	4.6e-116	388.5	0.0	1.7e-115	386.6	0.0	1.8	1	1	0	1	1	1	1	tRNA	synthetases	class	II	(A)
tRNA_SAD	PF07973.14	gi|289597120|ref|YP_003483816.1|	-	2.2e-17	62.9	1.7	5e-17	61.7	1.7	1.7	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
DHHA1	PF02272.19	gi|289597120|ref|YP_003483816.1|	-	3.6e-06	27.5	3.1	1e-05	25.9	3.1	1.9	1	0	0	1	1	1	1	DHHA1	domain
DrsE_2	PF13686.6	gi|289597120|ref|YP_003483816.1|	-	0.063	13.2	0.0	0.17	11.7	0.0	1.7	1	0	0	1	1	1	0	DsrE/DsrF/DrsH-like	family
Amidohydro_1	PF01979.20	gi|289597121|ref|YP_003483817.1|	-	2.3e-17	63.4	0.0	2.7e-16	59.8	0.0	2.0	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.11	gi|289597121|ref|YP_003483817.1|	-	9.3e-07	28.7	0.0	2e-05	24.3	0.0	2.1	2	0	0	2	2	2	2	Amidohydrolase	family
AMMECR1	PF01871.17	gi|289597122|ref|YP_003483818.1|	-	2.9e-51	173.4	0.0	3.3e-51	173.2	0.0	1.0	1	0	0	1	1	1	1	AMMECR1
Radical_SAM	PF04055.21	gi|289597123|ref|YP_003483819.1|	-	3.7e-17	63.2	0.2	5.9e-17	62.5	0.1	1.4	1	1	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.6	gi|289597123|ref|YP_003483819.1|	-	2.5e-14	53.4	0.7	4.9e-14	52.5	0.1	1.7	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.6	gi|289597123|ref|YP_003483819.1|	-	1.2e-11	45.1	0.1	2e-11	44.3	0.1	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
HTH_ParB	PF17762.1	gi|289597123|ref|YP_003483819.1|	-	0.14	12.0	0.3	0.32	10.8	0.0	1.8	2	0	0	2	2	2	0	HTH	domain	found	in	ParB	protein
Methyltransf_16	PF10294.9	gi|289597124|ref|YP_003483820.1|	-	0.043	13.6	0.2	0.053	13.3	0.2	1.2	1	0	0	1	1	1	0	Lysine	methyltransferase
Mei5	PF10376.9	gi|289597124|ref|YP_003483820.1|	-	0.083	12.7	0.0	0.09	12.6	0.0	1.1	1	0	0	1	1	1	0	Double-strand	recombination	repair	protein
PIN_4	PF13638.6	gi|289597125|ref|YP_003483821.1|	-	1e-06	29.1	0.1	1.9e-06	28.2	0.1	1.4	1	0	0	1	1	1	1	PIN	domain
PIN_12	PF16289.5	gi|289597125|ref|YP_003483821.1|	-	0.019	15.4	5.7	0.51	10.8	0.2	2.9	2	1	1	3	3	3	0	PIN	domain
Peptidase_M24	PF00557.24	gi|289597126|ref|YP_003483822.1|	-	7.5e-18	65.0	0.0	3.3e-17	62.9	0.0	1.9	1	1	0	1	1	1	1	Metallopeptidase	family	M24
MatE	PF01554.18	gi|289597127|ref|YP_003483823.1|	-	7.7e-56	188.2	38.5	5.9e-33	113.8	11.1	2.6	3	0	0	3	3	3	2	MatE
Polysacc_synt_C	PF14667.6	gi|289597127|ref|YP_003483823.1|	-	1.2e-06	28.7	17.1	1.2e-06	28.7	17.1	4.4	4	1	1	5	5	5	2	Polysaccharide	biosynthesis	C-terminal	domain
Radical_SAM	PF04055.21	gi|289597128|ref|YP_003483824.1|	-	1.4e-23	84.1	0.0	2.2e-23	83.5	0.0	1.3	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.6	gi|289597128|ref|YP_003483824.1|	-	1.4e-05	25.4	0.0	4.7e-05	23.7	0.0	1.9	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
OrfB_Zn_ribbon	PF07282.11	gi|289597128|ref|YP_003483824.1|	-	0.022	14.7	0.2	0.022	14.7	0.2	3.0	4	0	0	4	4	4	0	Putative	transposase	DNA-binding	domain
Rpr2	PF04032.16	gi|289597128|ref|YP_003483824.1|	-	0.037	14.3	0.6	0.2	11.9	0.0	2.3	2	0	0	2	2	2	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
zf-ribbon_3	PF13248.6	gi|289597128|ref|YP_003483824.1|	-	0.14	11.6	8.2	0.15	11.5	0.1	3.2	3	0	0	3	3	3	0	zinc-ribbon	domain
DZR	PF12773.7	gi|289597128|ref|YP_003483824.1|	-	0.15	12.1	0.2	0.15	12.1	0.2	2.7	3	1	0	3	3	3	0	Double	zinc	ribbon
NOB1_Zn_bind	PF08772.11	gi|289597128|ref|YP_003483824.1|	-	0.23	11.6	0.0	0.23	11.6	0.0	2.6	2	1	1	3	3	3	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
RNA_POL_M_15KD	PF02150.16	gi|289597128|ref|YP_003483824.1|	-	0.26	11.2	0.1	0.26	11.2	0.1	3.1	4	0	0	4	4	3	0	RNA	polymerases	M/15	Kd	subunit
zinc_ribbon_2	PF13240.6	gi|289597128|ref|YP_003483824.1|	-	0.45	10.3	0.1	0.45	10.3	0.1	3.8	4	0	0	4	4	4	0	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.7	gi|289597128|ref|YP_003483824.1|	-	0.67	10.0	5.3	0.66	10.0	0.4	2.6	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
zf-FPG_IleRS	PF06827.14	gi|289597128|ref|YP_003483824.1|	-	7.5	6.5	10.0	18	5.3	0.4	3.5	3	0	0	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
AIRS	PF00586.24	gi|289597129|ref|YP_003483825.1|	-	1.6e-15	57.5	0.0	2.4e-15	56.9	0.0	1.3	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
Phage_CI_repr	PF07022.13	gi|289597129|ref|YP_003483825.1|	-	0.11	12.6	0.0	0.57	10.3	0.0	2.1	3	0	0	3	3	3	0	Bacteriophage	CI	repressor	helix-turn-helix	domain
DUF2240	PF09999.9	gi|289597131|ref|YP_003483827.1|	-	1.2e-31	109.3	0.2	1.4e-31	109.0	0.2	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2240)
F-box_5	PF18511.1	gi|289597131|ref|YP_003483827.1|	-	0.077	12.6	0.1	0.37	10.4	0.1	2.1	2	0	0	2	2	2	0	F-box
TraF_2	PF13729.6	gi|289597131|ref|YP_003483827.1|	-	0.14	11.5	0.0	0.17	11.2	0.0	1.1	1	0	0	1	1	1	0	F	plasmid	transfer	operon,	TraF,	protein
NUDIX	PF00293.28	gi|289597132|ref|YP_003483828.1|	-	1.2e-13	51.2	0.0	1.9e-13	50.6	0.0	1.3	1	0	0	1	1	1	1	NUDIX	domain
HMG-CoA_red	PF00368.18	gi|289597133|ref|YP_003483829.1|	-	8e-120	400.2	1.8	9.4e-120	400.0	1.8	1.0	1	0	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	reductase
DUF3759	PF12585.8	gi|289597133|ref|YP_003483829.1|	-	0.11	12.5	3.1	0.22	11.6	0.9	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3759)
ribosomal_L24	PF17136.4	gi|289597133|ref|YP_003483829.1|	-	0.12	12.7	0.2	0.96	9.9	0.1	2.1	2	0	0	2	2	2	0	Ribosomal	proteins	50S	L24/mitochondrial	39S	L24
CARDB	PF07705.11	gi|289597134|ref|YP_003483830.1|	-	1.4e-23	83.1	29.4	1.8e-20	73.1	7.4	4.2	3	0	0	3	3	3	2	CARDB
Pro-kuma_activ	PF09286.11	gi|289597134|ref|YP_003483830.1|	-	3.9e-22	79.1	3.5	4.3e-22	79.0	0.0	2.7	3	0	0	3	3	3	1	Pro-kumamolisin,	activation	domain
CarboxypepD_reg	PF13620.6	gi|289597134|ref|YP_003483830.1|	-	3.4e-08	33.6	3.4	3.4e-08	33.6	3.4	5.8	3	2	2	5	5	5	1	Carboxypeptidase	regulatory-like	domain
NPCBM_assoc	PF10633.9	gi|289597134|ref|YP_003483830.1|	-	9.2e-08	32.2	16.3	0.00012	22.3	4.8	4.9	3	1	1	4	4	4	2	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
FixG_C	PF11614.8	gi|289597134|ref|YP_003483830.1|	-	2.1e-06	27.9	2.3	6.7e-06	26.3	0.8	2.5	2	0	0	2	2	2	1	IG-like	fold	at	C-terminal	of	FixG,	putative	oxidoreductase
CarbopepD_reg_2	PF13715.6	gi|289597134|ref|YP_003483830.1|	-	1.9e-05	24.6	1.9	0.00012	22.0	0.8	3.1	2	0	0	2	2	2	1	CarboxypepD_reg-like	domain
DUF11	PF01345.18	gi|289597134|ref|YP_003483830.1|	-	4.9e-05	23.5	9.2	4.9e-05	23.5	9.2	5.4	4	3	0	4	4	3	2	Domain	of	unknown	function	DUF11
A2M	PF00207.22	gi|289597134|ref|YP_003483830.1|	-	0.011	15.6	0.7	2.7	7.9	0.0	2.9	2	0	0	2	2	2	0	Alpha-2-macroglobulin	family
DUF4832	PF16116.5	gi|289597134|ref|YP_003483830.1|	-	0.012	15.5	2.3	2.1	8.2	0.5	2.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4832)
DUF2369	PF10179.9	gi|289597134|ref|YP_003483830.1|	-	0.013	15.9	0.0	0.038	14.4	0.0	1.7	1	0	0	1	1	1	0	Uncharacterised	conserved	protein	(DUF2369)
fn3_6	PF17766.1	gi|289597134|ref|YP_003483830.1|	-	0.018	15.2	6.7	2.4	8.4	0.1	3.2	3	0	0	3	3	3	0	Fibronectin	type-III	domain
DUF916	PF06030.12	gi|289597134|ref|YP_003483830.1|	-	0.17	12.0	4.5	0.16	12.0	0.8	2.9	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF916)
fn3_5	PF06280.12	gi|289597134|ref|YP_003483830.1|	-	0.27	11.9	13.1	0.12	13.0	2.6	4.1	3	1	1	4	4	4	0	Fn3-like	domain
TRAP_beta	PF05753.14	gi|289597134|ref|YP_003483830.1|	-	0.68	9.3	11.1	0.1	12.0	0.1	4.1	3	1	1	4	4	4	0	Translocon-associated	protein	beta	(TRAPB)
Iso_dh	PF00180.20	gi|289597135|ref|YP_003483831.1|	-	6.6e-73	245.8	0.1	1.2e-72	245.0	0.1	1.3	1	1	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
PLDc_N	PF13396.6	gi|289597136|ref|YP_003483832.1|	-	1.6e-05	24.7	13.1	1.6e-05	24.7	13.1	1.9	2	0	0	2	2	2	1	Phospholipase_D-nuclease	N-terminal
PPC	PF04151.15	gi|289597136|ref|YP_003483832.1|	-	0.00014	22.9	0.7	0.00028	21.9	0.7	1.5	1	0	0	1	1	1	1	Bacterial	pre-peptidase	C-terminal	domain
POLO_box	PF00659.18	gi|289597136|ref|YP_003483832.1|	-	0.0009	19.4	0.3	0.0018	18.5	0.3	1.5	1	0	0	1	1	1	1	POLO	box	duplicated	region
PAP2_3	PF14378.6	gi|289597136|ref|YP_003483832.1|	-	0.014	15.1	1.5	0.036	13.8	0.6	1.9	2	0	0	2	2	2	0	PAP2	superfamily
NicO	PF03824.16	gi|289597136|ref|YP_003483832.1|	-	0.025	13.9	0.3	0.042	13.2	0.3	1.5	1	0	0	1	1	1	0	High-affinity	nickel-transport	protein
TrkH	PF02386.16	gi|289597136|ref|YP_003483832.1|	-	0.12	10.8	3.4	0.2	10.0	3.4	1.3	1	0	0	1	1	1	0	Cation	transport	protein
FeoB_associated	PF12669.7	gi|289597136|ref|YP_003483832.1|	-	0.21	12.0	0.4	0.21	12.0	0.4	2.8	3	0	0	3	3	3	0	FeoB-associated	Cys-rich	membrane	protein
DUF1772	PF08592.11	gi|289597136|ref|YP_003483832.1|	-	0.23	11.8	2.5	0.23	11.8	0.5	1.9	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF1772)
Ac76	PF05814.11	gi|289597136|ref|YP_003483832.1|	-	0.24	11.4	1.4	17	5.5	0.5	2.4	2	0	0	2	2	2	0	Orf76	(Ac76)
Aconitase_C	PF00694.19	gi|289597137|ref|YP_003483833.1|	-	2.3e-18	66.8	0.0	3e-18	66.4	0.0	1.2	1	0	0	1	1	1	1	Aconitase	C-terminal	domain
Aconitase_2_N	PF06434.13	gi|289597137|ref|YP_003483833.1|	-	1.5e-05	24.7	0.0	0.001	18.8	0.0	2.1	1	1	0	1	1	1	1	Aconitate	hydratase	2	N-terminus
Aconitase	PF00330.20	gi|289597138|ref|YP_003483834.1|	-	1.9e-98	330.5	1.6	2.5e-97	326.8	1.6	2.1	1	1	0	1	1	1	1	Aconitase	family	(aconitate	hydratase)
DUF521	PF04412.13	gi|289597138|ref|YP_003483834.1|	-	0.0021	16.9	0.0	0.0032	16.2	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF521)
Citrate_synt	PF00285.21	gi|289597139|ref|YP_003483835.1|	-	1.3e-135	452.1	0.0	1.5e-135	451.9	0.0	1.0	1	0	0	1	1	1	1	Citrate	synthase,	C-terminal	domain
Amidohydro_1	PF01979.20	gi|289597140|ref|YP_003483836.1|	-	1.4e-62	212.0	0.0	1.6e-62	211.8	0.0	1.0	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.11	gi|289597140|ref|YP_003483836.1|	-	9.1e-15	55.1	0.0	5.1e-09	36.1	0.0	3.1	1	1	1	2	2	2	2	Amidohydrolase	family
Acetyltransf_4	PF13420.7	gi|289597140|ref|YP_003483836.1|	-	0.066	13.3	0.9	2.9	8.0	0.1	2.6	2	1	1	3	3	3	0	Acetyltransferase	(GNAT)	domain
tRNA-synt_1	PF00133.22	gi|289597141|ref|YP_003483837.1|	-	4.8e-60	203.5	7.6	2.1e-58	198.1	7.6	2.8	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1g	PF09334.11	gi|289597141|ref|YP_003483837.1|	-	3.7e-22	78.6	0.6	1.8e-10	40.1	0.0	3.4	3	0	0	3	3	3	3	tRNA	synthetases	class	I	(M)
Anticodon_1	PF08264.13	gi|289597141|ref|YP_003483837.1|	-	3.5e-18	66.0	3.4	1.1e-17	64.4	3.4	1.9	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1_2	PF13603.6	gi|289597141|ref|YP_003483837.1|	-	1.4e-08	34.5	0.1	4.8e-08	32.7	0.0	1.9	2	0	0	2	2	2	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1e	PF01406.19	gi|289597141|ref|YP_003483837.1|	-	4.7e-07	29.5	1.4	0.024	14.0	0.0	2.9	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1d	PF00750.19	gi|289597141|ref|YP_003483837.1|	-	0.0035	16.3	0.0	0.0093	15.0	0.0	1.7	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(R)
DctM	PF06808.12	gi|289597142|ref|YP_003483838.1|	-	1.1e-78	264.9	59.3	9.3e-54	182.8	30.5	3.1	3	1	1	4	4	4	2	Tripartite	ATP-independent	periplasmic	transporter,	DctM	component
DUF1850	PF08905.11	gi|289597143|ref|YP_003483839.1|	-	5.3e-11	42.7	0.0	8.1e-11	42.1	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1850)
Nairo_nucleo	PF02477.15	gi|289597143|ref|YP_003483839.1|	-	0.18	10.6	0.0	0.23	10.3	0.0	1.1	1	0	0	1	1	1	0	Nucleocapsid	N	protein
NMT1_3	PF16868.5	gi|289597144|ref|YP_003483840.1|	-	4.5e-158	525.1	18.2	2.8e-81	273.1	4.1	2.0	2	0	0	2	2	2	2	NMT1-like	family
NMT1	PF09084.11	gi|289597144|ref|YP_003483840.1|	-	8.5e-22	78.2	5.8	1.8e-10	41.1	0.6	2.6	2	1	0	2	2	2	2	NMT1/THI5	like
Phosphonate-bd	PF12974.7	gi|289597144|ref|YP_003483840.1|	-	3.1e-12	46.6	12.0	3e-05	23.8	0.5	4.2	3	1	0	4	4	4	2	ABC	transporter,	phosphonate,	periplasmic	substrate-binding	protein
SBP_bac_3	PF00497.20	gi|289597144|ref|YP_003483840.1|	-	1.1e-07	31.5	16.3	0.00027	20.4	0.5	3.8	2	2	1	4	4	4	2	Bacterial	extracellular	solute-binding	proteins,	family	3
Asp_Glu_race	PF01177.22	gi|289597144|ref|YP_003483840.1|	-	0.00027	20.9	0.1	0.87	9.4	0.0	2.5	2	0	0	2	2	2	2	Asp/Glu/Hydantoin	racemase
DUF4179	PF13786.6	gi|289597144|ref|YP_003483840.1|	-	0.018	15.5	1.3	2.1	8.9	0.5	3.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4179)
DUF4431	PF14485.6	gi|289597144|ref|YP_003483840.1|	-	0.031	14.1	0.0	13	5.7	0.0	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4431)
Flavoprotein	PF02441.19	gi|289597144|ref|YP_003483840.1|	-	0.76	9.5	3.2	18	5.0	0.7	3.0	2	1	0	2	2	2	0	Flavoprotein
DUF3566	PF12089.8	gi|289597144|ref|YP_003483840.1|	-	3.5	8.0	8.7	12	6.3	0.1	3.4	4	0	0	4	4	4	0	Transmembrane	domain	of	unknown	function	(DUF3566)
Cellulase	PF00150.18	gi|289597145|ref|YP_003483841.1|	-	7.6e-14	51.8	4.0	9.9e-14	51.4	3.2	1.5	1	1	1	2	2	2	1	Cellulase	(glycosyl	hydrolase	family	5)
ODV-E18	PF10717.9	gi|289597145|ref|YP_003483841.1|	-	0.0036	17.1	2.6	0.28	11.1	0.3	2.6	2	0	0	2	2	2	2	Occlusion-derived	virus	envelope	protein	ODV-E18
Mycobact_memb	PF05423.13	gi|289597145|ref|YP_003483841.1|	-	0.027	14.4	0.1	0.027	14.4	0.1	2.3	2	0	0	2	2	2	0	Mycobacterium	membrane	protein
Ribosomal_L18	PF17135.4	gi|289597146|ref|YP_003483842.1|	-	8e-12	44.9	0.0	8.5e-12	44.8	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	60S	L18	and	50S	L18e
Ribosomal_L27A	PF00828.19	gi|289597146|ref|YP_003483842.1|	-	5.9e-10	39.9	0.7	2e-09	38.2	0.7	1.9	1	1	0	1	1	1	1	Ribosomal	proteins	50S-L15,	50S-L18e,	60S-L27A
Aldo_ket_red	PF00248.21	gi|289597146|ref|YP_003483842.1|	-	0.13	11.4	0.0	0.16	11.1	0.0	1.1	1	0	0	1	1	1	0	Aldo/keto	reductase	family
Ribosomal_L13	PF00572.18	gi|289597147|ref|YP_003483843.1|	-	1.2e-12	48.2	2.4	1.5e-10	41.4	2.4	2.1	1	1	0	1	1	1	1	Ribosomal	protein	L13
DraK_HK_N	PF18092.1	gi|289597147|ref|YP_003483843.1|	-	0.16	12.4	0.0	0.26	11.8	0.0	1.3	1	0	0	1	1	1	0	DraK	Histidine	Kinase	N-terminal	domain
Ribosomal_S9	PF00380.19	gi|289597148|ref|YP_003483844.1|	-	1.1e-31	109.9	1.2	1.2e-31	109.7	1.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S9/S16
Mso1_Sec1_bdg	PF14475.6	gi|289597148|ref|YP_003483844.1|	-	0.21	11.2	0.1	0.89	9.2	0.0	1.9	2	0	0	2	2	2	0	Sec1-binding	region	of	Mso1
RNA_pol_N	PF01194.17	gi|289597149|ref|YP_003483845.1|	-	2.4e-24	85.4	0.5	2.9e-24	85.1	0.5	1.1	1	0	0	1	1	1	1	RNA	polymerases	N	/	8	kDa	subunit
MutS_V	PF00488.21	gi|289597150|ref|YP_003483846.1|	-	1.7e-87	292.3	1.0	4.4e-87	291.0	0.5	1.9	2	0	0	2	2	2	1	MutS	domain	V
MutS_I	PF01624.20	gi|289597150|ref|YP_003483846.1|	-	1.1e-44	151.3	0.0	3.5e-44	149.7	0.0	1.9	2	0	0	2	2	2	1	MutS	domain	I
MutS_III	PF05192.18	gi|289597150|ref|YP_003483846.1|	-	7.1e-41	140.5	1.3	2.2e-40	138.9	1.3	1.9	1	0	0	1	1	1	1	MutS	domain	III
MutS_IV	PF05190.18	gi|289597150|ref|YP_003483846.1|	-	2.5e-29	101.5	3.2	2.5e-29	101.5	3.2	2.6	2	0	0	2	2	2	1	MutS	family	domain	IV
MutS_II	PF05188.17	gi|289597150|ref|YP_003483846.1|	-	4.6e-16	59.3	0.8	2.3e-15	57.1	0.2	2.5	2	1	0	2	2	2	1	MutS	domain	II
AAA_27	PF13514.6	gi|289597150|ref|YP_003483846.1|	-	0.1	12.2	0.0	0.23	11.0	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_14	PF13173.6	gi|289597150|ref|YP_003483846.1|	-	0.21	11.6	0.0	0.21	11.6	0.0	3.7	5	1	0	5	5	5	0	AAA	domain
AAA_23	PF13476.6	gi|289597150|ref|YP_003483846.1|	-	0.64	10.5	0.0	0.64	10.5	0.0	4.0	4	0	0	4	4	4	0	AAA	domain
Pex24p	PF06398.11	gi|289597152|ref|YP_003483848.1|	-	1.9	7.4	6.8	2.8	6.9	6.9	1.5	1	1	0	1	1	1	0	Integral	peroxisomal	membrane	peroxin
FtsX	PF02687.21	gi|289597154|ref|YP_003483850.1|	-	2.4e-05	24.7	7.7	2.4e-05	24.7	7.7	3.2	3	0	0	3	3	3	1	FtsX-like	permease	family
DUF4625	PF15418.6	gi|289597154|ref|YP_003483850.1|	-	0.0023	18.2	4.9	13	6.0	0.0	5.3	5	1	0	5	5	5	2	Domain	of	unknown	function	(DUF4625)
Big_7	PF17957.1	gi|289597154|ref|YP_003483850.1|	-	0.062	14.1	26.2	0.17	12.7	0.2	7.1	8	0	0	8	8	8	0	Bacterial	Ig	domain
PKD	PF00801.20	gi|289597154|ref|YP_003483850.1|	-	0.085	12.7	1.5	9.5	6.2	0.0	4.5	5	0	0	5	5	5	0	PKD	domain
FtsX	PF02687.21	gi|289597155|ref|YP_003483851.1|	-	0.00053	20.4	11.6	0.00053	20.4	11.6	3.4	3	1	0	3	3	3	1	FtsX-like	permease	family
DUF3272	PF11676.8	gi|289597155|ref|YP_003483851.1|	-	0.29	11.4	3.2	0.33	11.2	0.6	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3272)
ABC_tran	PF00005.27	gi|289597156|ref|YP_003483852.1|	-	2.6e-31	108.9	0.1	3.5e-31	108.5	0.1	1.2	1	0	0	1	1	1	1	ABC	transporter
SMC_N	PF02463.19	gi|289597156|ref|YP_003483852.1|	-	1.2e-05	24.8	1.1	3.5e-05	23.3	1.1	1.8	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_21	PF13304.6	gi|289597156|ref|YP_003483852.1|	-	3.7e-05	23.7	0.4	0.038	13.8	0.0	2.1	1	1	0	2	2	2	2	AAA	domain,	putative	AbiEii	toxin,	Type	IV	TA	system
RsgA_GTPase	PF03193.16	gi|289597156|ref|YP_003483852.1|	-	0.0024	17.8	1.1	0.0069	16.3	0.1	2.2	2	1	1	3	3	3	1	RsgA	GTPase
AAA_22	PF13401.6	gi|289597156|ref|YP_003483852.1|	-	0.0053	17.0	1.1	0.25	11.6	1.1	2.3	1	1	0	1	1	1	1	AAA	domain
Septin	PF00735.18	gi|289597156|ref|YP_003483852.1|	-	0.007	15.7	0.9	0.016	14.5	0.0	1.9	2	1	0	2	2	2	1	Septin
TniB	PF05621.11	gi|289597156|ref|YP_003483852.1|	-	0.0093	15.4	0.8	0.17	11.3	0.2	2.1	2	0	0	2	2	2	1	Bacterial	TniB	protein
NACHT	PF05729.12	gi|289597156|ref|YP_003483852.1|	-	0.013	15.5	0.0	0.023	14.6	0.0	1.6	1	0	0	1	1	1	0	NACHT	domain
AAA_16	PF13191.6	gi|289597156|ref|YP_003483852.1|	-	0.031	14.7	0.0	0.047	14.1	0.0	1.5	1	1	0	1	1	1	0	AAA	ATPase	domain
Epimerase_2	PF02350.19	gi|289597156|ref|YP_003483852.1|	-	0.033	13.0	0.1	0.046	12.6	0.1	1.2	1	0	0	1	1	1	0	UDP-N-acetylglucosamine	2-epimerase
DnaB_C	PF03796.15	gi|289597156|ref|YP_003483852.1|	-	0.036	13.4	0.2	1.3	8.3	0.0	2.1	2	0	0	2	2	2	0	DnaB-like	helicase	C	terminal	domain
AAA_29	PF13555.6	gi|289597156|ref|YP_003483852.1|	-	0.042	13.6	0.1	0.074	12.8	0.1	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
Rad17	PF03215.15	gi|289597156|ref|YP_003483852.1|	-	0.044	13.7	0.2	0.23	11.3	0.0	1.9	1	1	0	2	2	2	0	Rad17	P-loop	domain
SbcCD_C	PF13558.6	gi|289597156|ref|YP_003483852.1|	-	0.075	13.3	0.1	0.52	10.6	0.1	2.1	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_24	PF13479.6	gi|289597156|ref|YP_003483852.1|	-	0.088	12.5	0.0	0.16	11.7	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Fungal_lectin	PF07938.12	gi|289597157|ref|YP_003483853.1|	-	0.12	11.8	0.0	0.15	11.4	0.0	1.1	1	0	0	1	1	1	0	Fungal	fucose-specific	lectin
DUF1616	PF07760.11	gi|289597157|ref|YP_003483853.1|	-	5.6	6.3	14.1	7.3	5.9	0.1	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1616)
MgtE	PF01769.16	gi|289597158|ref|YP_003483854.1|	-	9.1e-35	119.7	30.2	4e-20	72.4	9.0	3.3	3	1	0	4	4	4	2	Divalent	cation	transporter
RPA_C	PF08784.11	gi|289597159|ref|YP_003483855.1|	-	0.001	19.7	0.0	0.0025	18.4	0.0	1.6	2	0	0	2	2	2	1	Replication	protein	A	C	terminal
RNA_pol_Rpc34	PF05158.12	gi|289597159|ref|YP_003483855.1|	-	0.012	15.0	0.1	0.018	14.5	0.1	1.2	1	0	0	1	1	1	0	RNA	polymerase	Rpc34	subunit
AIG1	PF04548.16	gi|289597159|ref|YP_003483855.1|	-	0.017	14.5	0.2	0.025	13.9	0.2	1.2	1	0	0	1	1	1	0	AIG1	family
tRNA_anti-codon	PF01336.25	gi|289597159|ref|YP_003483855.1|	-	0.14	12.2	0.1	0.26	11.3	0.1	1.4	1	0	0	1	1	1	0	OB-fold	nucleic	acid	binding	domain
PCI	PF01399.27	gi|289597159|ref|YP_003483855.1|	-	0.31	11.6	1.3	76	3.9	0.0	3.7	3	1	0	3	3	3	0	PCI	domain
tRNA_anti-codon	PF01336.25	gi|289597160|ref|YP_003483856.1|	-	3.6e-09	36.5	5.8	0.0037	17.2	0.2	3.9	4	0	0	4	4	4	3	OB-fold	nucleic	acid	binding	domain
zf-RING_7	PF02591.15	gi|289597160|ref|YP_003483856.1|	-	0.0032	17.6	0.1	0.0074	16.4	0.1	1.6	1	0	0	1	1	1	1	C4-type	zinc	ribbon	domain
Bac_DNA_binding	PF00216.21	gi|289597161|ref|YP_003483857.1|	-	0.0015	18.7	0.1	0.0043	17.2	0.1	1.8	1	0	0	1	1	1	1	Bacterial	DNA-binding	protein
Rep_fac_C	PF08542.11	gi|289597161|ref|YP_003483857.1|	-	0.0096	16.3	0.3	0.11	13.0	0.1	2.6	2	1	1	3	3	3	1	Replication	factor	C	C-terminal	domain
RDD	PF06271.12	gi|289597162|ref|YP_003483858.1|	-	3.1e-11	43.7	4.1	3.9e-11	43.3	4.1	1.2	1	0	0	1	1	1	1	RDD	family
HTH_20	PF12840.7	gi|289597163|ref|YP_003483859.1|	-	2.6e-09	37.0	0.1	3.7e-09	36.5	0.1	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_5	PF01022.20	gi|289597163|ref|YP_003483859.1|	-	1e-07	31.7	0.8	2.3e-07	30.6	0.8	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_11	PF08279.12	gi|289597163|ref|YP_003483859.1|	-	0.0037	17.2	0.7	0.0037	17.2	0.7	2.0	2	1	0	2	2	2	1	HTH	domain
PadR	PF03551.14	gi|289597163|ref|YP_003483859.1|	-	0.037	14.0	0.7	0.12	12.3	0.1	2.2	2	1	0	2	2	2	0	Transcriptional	regulator	PadR-like	family
DUF4423	PF14394.6	gi|289597163|ref|YP_003483859.1|	-	0.067	12.9	0.2	0.067	12.9	0.2	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4423)
HxlR	PF01638.17	gi|289597163|ref|YP_003483859.1|	-	0.074	12.9	0.6	0.1	12.5	0.1	1.6	2	0	0	2	2	2	0	HxlR-like	helix-turn-helix
HTH_50	PF18024.1	gi|289597163|ref|YP_003483859.1|	-	0.17	11.5	2.0	0.41	10.3	0.1	2.4	2	0	0	2	2	2	0	Helix-turn-helix	domain
MazG-like	PF12643.7	gi|289597163|ref|YP_003483859.1|	-	0.7	10.2	7.4	0.25	11.6	1.1	2.2	2	0	0	2	2	2	0	MazG-like	family
HSP20	PF00011.21	gi|289597164|ref|YP_003483860.1|	-	5.1e-11	42.6	3.6	3.2e-09	36.8	3.6	2.3	1	1	0	1	1	1	1	Hsp20/alpha	crystallin	family
ArsA_HSP20	PF17886.1	gi|289597164|ref|YP_003483860.1|	-	5e-10	38.8	0.1	7.3e-10	38.3	0.1	1.3	1	0	0	1	1	1	1	HSP20-like	domain	found	in	ArsA
GvpH	PF05455.11	gi|289597164|ref|YP_003483860.1|	-	0.00025	21.1	0.0	0.00029	20.9	0.0	1.3	1	0	0	1	1	1	1	GvpH
CS	PF04969.16	gi|289597164|ref|YP_003483860.1|	-	0.00082	20.3	0.3	0.0013	19.7	0.3	1.3	1	0	0	1	1	1	1	CS	domain
PIH1_CS	PF18201.1	gi|289597164|ref|YP_003483860.1|	-	0.015	15.7	0.0	0.029	14.8	0.0	1.4	1	0	0	1	1	1	0	PIH1	CS-like	domain
DUF401	PF04165.12	gi|289597165|ref|YP_003483861.1|	-	2.4e-48	165.4	37.6	3.6e-48	164.9	37.6	1.2	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF401)
DUF969	PF06149.12	gi|289597165|ref|YP_003483861.1|	-	0.18	11.2	12.2	0.024	14.1	7.7	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF969)
TruB_N	PF01509.18	gi|289597166|ref|YP_003483862.1|	-	3.9e-27	95.5	0.5	1.4e-16	61.2	0.1	3.1	1	1	1	2	2	2	2	TruB	family	pseudouridylate	synthase	(N	terminal	domain)
TruB_C_2	PF16198.5	gi|289597166|ref|YP_003483862.1|	-	7.3e-23	80.5	0.0	1.3e-22	79.7	0.0	1.4	1	0	0	1	1	1	1	tRNA	pseudouridylate	synthase	B	C-terminal	domain
PUA	PF01472.20	gi|289597166|ref|YP_003483862.1|	-	3e-10	39.9	0.3	2.6e-09	36.9	0.0	2.3	2	0	0	2	2	2	1	PUA	domain
DKCLD	PF08068.12	gi|289597166|ref|YP_003483862.1|	-	8.3e-08	32.2	0.0	2e-07	31.0	0.0	1.6	1	0	0	1	1	1	1	DKCLD	(NUC011)	domain
Cytidylate_kin2	PF13189.6	gi|289597167|ref|YP_003483863.1|	-	5.7e-22	78.7	0.2	4e-20	72.7	0.2	2.1	1	1	0	1	1	1	1	Cytidylate	kinase-like	family
AAA_18	PF13238.6	gi|289597167|ref|YP_003483863.1|	-	2.5e-19	70.1	0.0	3.2e-19	69.8	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
Cytidylate_kin	PF02224.18	gi|289597167|ref|YP_003483863.1|	-	2.5e-14	53.5	0.3	3.2e-08	33.6	0.0	2.1	1	1	1	2	2	2	2	Cytidylate	kinase
AAA_17	PF13207.6	gi|289597167|ref|YP_003483863.1|	-	2.7e-14	53.8	0.0	5e-14	52.9	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.6	gi|289597167|ref|YP_003483863.1|	-	1e-08	35.4	0.0	3.7e-08	33.6	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
ADK	PF00406.22	gi|289597167|ref|YP_003483863.1|	-	2.2e-07	31.1	0.0	5.6e-07	29.8	0.0	1.7	2	0	0	2	2	2	1	Adenylate	kinase
SKI	PF01202.22	gi|289597167|ref|YP_003483863.1|	-	7.8e-07	29.3	0.6	2.1e-06	27.9	0.6	1.7	1	1	0	1	1	1	1	Shikimate	kinase
AAA_28	PF13521.6	gi|289597167|ref|YP_003483863.1|	-	4e-06	27.2	0.0	5.1e-06	26.8	0.0	1.3	1	1	0	1	1	1	1	AAA	domain
dNK	PF01712.19	gi|289597167|ref|YP_003483863.1|	-	4.5e-06	26.7	2.5	0.00059	19.7	0.1	2.3	1	1	1	2	2	2	2	Deoxynucleoside	kinase
AAA	PF00004.29	gi|289597167|ref|YP_003483863.1|	-	6.9e-06	26.5	0.0	9.9e-06	26.0	0.0	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Rad17	PF03215.15	gi|289597167|ref|YP_003483863.1|	-	1.5e-05	25.0	0.0	2.2e-05	24.5	0.0	1.3	1	0	0	1	1	1	1	Rad17	P-loop	domain
CoaE	PF01121.20	gi|289597167|ref|YP_003483863.1|	-	0.00022	21.0	0.0	0.0069	16.1	0.0	2.2	2	0	0	2	2	2	1	Dephospho-CoA	kinase
RuvB_N	PF05496.12	gi|289597167|ref|YP_003483863.1|	-	0.00081	19.2	0.0	0.0013	18.4	0.0	1.3	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	RuvB	P-loop	domain
RNA_helicase	PF00910.22	gi|289597167|ref|YP_003483863.1|	-	0.0042	17.5	0.1	0.0085	16.5	0.0	1.6	2	0	0	2	2	1	1	RNA	helicase
AAA_14	PF13173.6	gi|289597167|ref|YP_003483863.1|	-	0.0058	16.7	0.3	0.043	13.9	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_22	PF13401.6	gi|289597167|ref|YP_003483863.1|	-	0.0058	16.9	0.0	0.0087	16.3	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
ABC_tran	PF00005.27	gi|289597167|ref|YP_003483863.1|	-	0.0063	17.0	0.1	0.01	16.4	0.1	1.4	1	1	0	1	1	1	1	ABC	transporter
NTPase_1	PF03266.15	gi|289597167|ref|YP_003483863.1|	-	0.0074	16.2	0.2	0.016	15.1	0.0	1.7	2	0	0	2	2	2	1	NTPase
PRK	PF00485.18	gi|289597167|ref|YP_003483863.1|	-	0.0089	15.8	0.2	0.092	12.5	0.0	2.2	1	1	1	2	2	2	1	Phosphoribulokinase	/	Uridine	kinase	family
AAA_24	PF13479.6	gi|289597167|ref|YP_003483863.1|	-	0.016	15.0	0.5	0.028	14.2	0.5	1.6	1	1	0	1	1	1	0	AAA	domain
KTI12	PF08433.10	gi|289597167|ref|YP_003483863.1|	-	0.017	14.6	0.0	0.026	14.0	0.0	1.5	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
AAA_5	PF07728.14	gi|289597167|ref|YP_003483863.1|	-	0.018	15.0	0.1	0.027	14.5	0.1	1.5	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
TIP49	PF06068.13	gi|289597167|ref|YP_003483863.1|	-	0.027	13.7	0.0	0.039	13.2	0.0	1.3	1	0	0	1	1	1	0	TIP49	P-loop	domain
Zeta_toxin	PF06414.12	gi|289597167|ref|YP_003483863.1|	-	0.032	13.5	0.0	0.046	13.0	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
AAA_16	PF13191.6	gi|289597167|ref|YP_003483863.1|	-	0.038	14.4	0.0	0.048	14.0	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_2	PF07724.14	gi|289597167|ref|YP_003483863.1|	-	0.042	14.0	0.0	0.073	13.2	0.0	1.4	1	0	0	1	1	1	0	AAA	domain	(Cdc48	subfamily)
APS_kinase	PF01583.20	gi|289597167|ref|YP_003483863.1|	-	0.047	13.6	0.0	0.11	12.4	0.0	1.7	2	0	0	2	2	2	0	Adenylylsulphate	kinase
Thymidylate_kin	PF02223.17	gi|289597167|ref|YP_003483863.1|	-	0.054	13.2	0.6	0.36	10.5	0.6	2.3	1	1	0	1	1	1	0	Thymidylate	kinase
SRP54	PF00448.22	gi|289597167|ref|YP_003483863.1|	-	0.058	13.0	0.0	0.078	12.6	0.0	1.2	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
T2SSE	PF00437.20	gi|289597167|ref|YP_003483863.1|	-	0.093	11.8	0.4	0.2	10.7	0.3	1.5	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
Mg_chelatase	PF01078.21	gi|289597167|ref|YP_003483863.1|	-	0.11	11.8	0.1	0.2	11.0	0.1	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
TsaE	PF02367.17	gi|289597167|ref|YP_003483863.1|	-	0.12	12.4	0.3	0.41	10.7	0.3	2.0	1	1	0	1	1	1	0	Threonylcarbamoyl	adenosine	biosynthesis	protein	TsaE
cobW	PF02492.19	gi|289597167|ref|YP_003483863.1|	-	0.14	11.7	0.6	0.25	10.9	0.2	1.6	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_30	PF13604.6	gi|289597167|ref|YP_003483863.1|	-	0.15	11.7	0.3	0.59	9.8	0.3	1.8	1	1	1	2	2	2	0	AAA	domain
CPT	PF07931.12	gi|289597167|ref|YP_003483863.1|	-	0.17	11.7	0.1	2.5	7.9	0.1	2.3	1	1	0	1	1	1	0	Chloramphenicol	phosphotransferase-like	protein
EMC3_TMCO1	PF01956.16	gi|289597168|ref|YP_003483864.1|	-	1e-16	61.1	13.8	1e-16	61.1	13.8	1.8	2	0	0	2	2	2	1	Integral	membrane	protein	EMC3/TMCO1-like
TFIID_NTD2	PF04494.15	gi|289597168|ref|YP_003483864.1|	-	0.02	15.1	1.1	0.035	14.3	1.1	1.3	1	0	0	1	1	1	0	WD40	associated	region	in	TFIID	subunit,	NTD2	domain
AAA_17	PF13207.6	gi|289597169|ref|YP_003483865.1|	-	4.7e-38	130.7	0.0	5.9e-38	130.4	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.6	gi|289597169|ref|YP_003483865.1|	-	2.2e-08	34.7	0.0	3.3e-08	34.1	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_33	PF13671.6	gi|289597169|ref|YP_003483865.1|	-	2.4e-06	27.8	0.0	4.3e-06	26.9	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_28	PF13521.6	gi|289597169|ref|YP_003483865.1|	-	0.00014	22.2	0.1	0.00026	21.3	0.1	1.6	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.29	gi|289597169|ref|YP_003483865.1|	-	0.0024	18.3	0.0	0.0046	17.4	0.0	1.5	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
SKI	PF01202.22	gi|289597169|ref|YP_003483865.1|	-	0.0088	16.2	0.1	0.048	13.8	0.1	2.1	1	1	0	1	1	1	1	Shikimate	kinase
Viral_helicase1	PF01443.18	gi|289597169|ref|YP_003483865.1|	-	0.009	15.8	0.0	0.043	13.6	0.0	1.9	2	0	0	2	2	2	1	Viral	(Superfamily	1)	RNA	helicase
AAA_16	PF13191.6	gi|289597169|ref|YP_003483865.1|	-	0.017	15.5	0.0	0.022	15.2	0.0	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
FeoB_N	PF02421.18	gi|289597169|ref|YP_003483865.1|	-	0.032	13.8	0.0	0.049	13.1	0.0	1.4	1	0	0	1	1	1	0	Ferrous	iron	transport	protein	B
DUF3918	PF13056.6	gi|289597169|ref|YP_003483865.1|	-	0.081	12.5	0.0	0.23	11.1	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3918)
MMR_HSR1	PF01926.23	gi|289597169|ref|YP_003483865.1|	-	0.097	12.8	0.2	0.16	12.1	0.2	1.8	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
SecY	PF00344.20	gi|289597170|ref|YP_003483866.1|	-	3e-69	233.6	19.5	3e-69	233.6	19.5	1.6	2	0	0	2	2	2	1	SecY	translocase
Plug_translocon	PF10559.9	gi|289597170|ref|YP_003483866.1|	-	6.9e-11	41.8	3.4	1.1e-10	41.1	0.6	2.8	2	0	0	2	2	2	1	Plug	domain	of	Sec61p
Phage_holin_5_1	PF06946.11	gi|289597170|ref|YP_003483866.1|	-	0.024	15.0	0.2	0.024	15.0	0.2	2.5	3	0	0	3	3	3	0	Bacteriophage	A118-like	holin,	Hol118
Phage_holin_5_2	PF16079.5	gi|289597170|ref|YP_003483866.1|	-	0.059	13.7	0.7	0.059	13.7	0.7	3.3	3	0	0	3	3	3	0	Phage	holin	family	Hol44,	in	holin	superfamily	V
Ribosomal_L27A	PF00828.19	gi|289597171|ref|YP_003483867.1|	-	4.7e-24	85.5	0.7	6.1e-24	85.1	0.7	1.1	1	0	0	1	1	1	1	Ribosomal	proteins	50S-L15,	50S-L18e,	60S-L27A
Ribosomal_L30	PF00327.20	gi|289597172|ref|YP_003483868.1|	-	1.7e-16	59.8	0.3	3.5e-16	58.8	0.3	1.6	1	0	0	1	1	1	1	Ribosomal	protein	L30p/L7e
Ribosomal_S5	PF00333.20	gi|289597173|ref|YP_003483869.1|	-	1.5e-25	89.0	4.4	3.3e-25	87.9	4.4	1.6	1	0	0	1	1	1	1	Ribosomal	protein	S5,	N-terminal	domain
Ribosomal_S5_C	PF03719.15	gi|289597173|ref|YP_003483869.1|	-	9.5e-22	76.2	0.3	1.8e-21	75.4	0.3	1.4	1	0	0	1	1	1	1	Ribosomal	protein	S5,	C-terminal	domain
Ribosomal_L5e	PF17144.4	gi|289597174|ref|YP_003483870.1|	-	2e-31	109.2	3.5	7.1e-20	71.6	2.5	2.4	1	1	1	2	2	2	2	Ribosomal	large	subunit	proteins	60S	L5,	and	50S	L18
Ribosomal_L18p	PF00861.22	gi|289597174|ref|YP_003483870.1|	-	2.9e-06	27.6	0.0	4.1e-06	27.1	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	L18	of	archaea,	bacteria,	mitoch.	and	chloroplast
Ribosomal_L19e	PF01280.20	gi|289597175|ref|YP_003483871.1|	-	6.2e-57	191.7	10.1	6.9e-57	191.6	10.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L19e
Ribosomal_L32e	PF01655.18	gi|289597176|ref|YP_003483872.1|	-	1.6e-39	134.7	1.0	2.1e-39	134.3	1.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L32
Ribosomal_L6	PF00347.23	gi|289597177|ref|YP_003483873.1|	-	6.6e-29	100.4	3.1	3.7e-17	62.8	0.1	2.1	2	0	0	2	2	2	2	Ribosomal	protein	L6
RL10P_insert	PF17777.1	gi|289597177|ref|YP_003483873.1|	-	0.13	12.3	0.5	0.37	10.8	0.0	2.1	3	0	0	3	3	3	0	Insertion	domain	in	60S	ribosomal	protein	L10P
CooT	PF10133.9	gi|289597177|ref|YP_003483873.1|	-	1.1	9.6	4.9	2.9	8.2	0.0	3.4	4	1	0	4	4	4	0	CO	dehydrogenase	accessory	protein	CooT
Ribosomal_S8	PF00410.19	gi|289597178|ref|YP_003483874.1|	-	5.2e-29	100.8	0.0	6.3e-29	100.5	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S8
Ribosomal_S14	PF00253.21	gi|289597179|ref|YP_003483875.1|	-	3.5e-12	45.9	8.8	4.1e-12	45.7	8.8	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S14p/S29e
Ribosomal_L5_C	PF00673.21	gi|289597180|ref|YP_003483876.1|	-	1.3e-23	82.9	0.0	2.2e-23	82.2	0.0	1.4	1	0	0	1	1	1	1	ribosomal	L5P	family	C-terminus
Ribosomal_L5	PF00281.19	gi|289597180|ref|YP_003483876.1|	-	3e-19	69.1	0.3	4.6e-19	68.5	0.3	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L5
CBFB_NFYA	PF02045.15	gi|289597180|ref|YP_003483876.1|	-	0.041	14.5	2.1	0.098	13.3	2.1	1.5	1	0	0	1	1	1	0	CCAAT-binding	transcription	factor	(CBF-B/NF-YA)	subunit	B
Ribosomal_S4e	PF00900.20	gi|289597181|ref|YP_003483877.1|	-	5.4e-28	96.7	0.3	9.8e-28	95.9	0.3	1.4	1	0	0	1	1	1	1	Ribosomal	family	S4e
RS4NT	PF08071.12	gi|289597181|ref|YP_003483877.1|	-	3.5e-13	49.4	4.7	6.4e-13	48.6	4.7	1.5	1	0	0	1	1	1	1	RS4NT	(NUC023)	domain
S4	PF01479.25	gi|289597181|ref|YP_003483877.1|	-	6.3e-11	41.8	0.8	1.3e-10	40.8	0.8	1.6	1	0	0	1	1	1	1	S4	domain
KOW	PF00467.29	gi|289597181|ref|YP_003483877.1|	-	0.063	13.3	0.8	0.063	13.3	0.8	2.3	2	0	0	2	2	2	0	KOW	motif
Ribosomal_L26	PF16906.5	gi|289597182|ref|YP_003483878.1|	-	1.4e-27	96.0	2.4	3.4e-27	94.7	2.4	1.6	1	1	0	1	1	1	1	Ribosomal	proteins	L26	eukaryotic,	L24P	archaeal
KOW	PF00467.29	gi|289597182|ref|YP_003483878.1|	-	5e-08	32.6	7.9	8.8e-08	31.8	7.9	1.4	1	0	0	1	1	1	1	KOW	motif
DUF1131	PF06572.12	gi|289597182|ref|YP_003483878.1|	-	0.093	12.4	0.2	0.15	11.8	0.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1131)
RNA_pol_Rpb5_C	PF01191.19	gi|289597182|ref|YP_003483878.1|	-	0.87	9.5	0.0	0.87	9.5	0.0	2.9	2	1	1	3	3	3	0	RNA	polymerase	Rpb5,	C-terminal	domain
DUF2457	PF10446.9	gi|289597182|ref|YP_003483878.1|	-	2.6	7.1	12.1	3.7	6.6	12.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2457)
Ribosomal_L14	PF00238.19	gi|289597183|ref|YP_003483879.1|	-	1.6e-37	128.3	0.1	1.9e-37	128.1	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L14p/L23e
EutN_CcmL	PF03319.13	gi|289597183|ref|YP_003483879.1|	-	0.043	14.4	0.2	0.32	11.6	0.2	2.2	1	1	0	1	1	1	0	Ethanolamine	utilisation	protein	EutN/carboxysome
Ribosomal_S17	PF00366.20	gi|289597184|ref|YP_003483880.1|	-	2.6e-29	101.1	3.4	3.3e-29	100.8	3.4	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S17
Ribosomal_S17_N	PF16205.5	gi|289597184|ref|YP_003483880.1|	-	0.0079	16.6	0.3	0.022	15.1	0.0	1.9	2	0	0	2	2	2	1	Ribosomal_S17	N-terminal
CxC5	PF18718.1	gi|289597184|ref|YP_003483880.1|	-	0.08	13.0	0.9	0.15	12.1	0.9	1.4	1	1	0	1	1	1	0	CxC5	like	cysteine	cluster	associated	with	KDZ	transposases
zf-C3H1	PF10650.9	gi|289597184|ref|YP_003483880.1|	-	0.7	9.7	2.6	1.4	8.7	2.6	1.4	1	0	0	1	1	1	0	Putative	zinc-finger	domain
UPF0086	PF01868.16	gi|289597185|ref|YP_003483881.1|	-	1e-21	76.7	0.0	1.1e-21	76.5	0.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	UPF0086
DUF2111	PF09884.9	gi|289597185|ref|YP_003483881.1|	-	0.0094	16.0	0.1	0.012	15.6	0.1	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2111)
Ribosomal_L29	PF00831.23	gi|289597186|ref|YP_003483882.1|	-	4.1e-17	61.9	0.1	5.2e-17	61.5	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	L29	protein
HRDC	PF00570.23	gi|289597186|ref|YP_003483882.1|	-	0.016	15.2	1.1	0.28	11.2	0.3	2.3	2	0	0	2	2	2	0	HRDC	domain
WHIM1	PF15612.6	gi|289597186|ref|YP_003483882.1|	-	0.049	13.2	0.1	0.066	12.8	0.1	1.3	1	0	0	1	1	1	0	WSTF,	HB1,	Itc1p,	MBD9	motif	1
Ribosomal_S3_C	PF00189.20	gi|289597187|ref|YP_003483883.1|	-	4.4e-25	88.0	1.1	1.1e-24	86.7	1.1	1.7	1	0	0	1	1	1	1	Ribosomal	protein	S3,	C-terminal	domain
KH_2	PF07650.17	gi|289597187|ref|YP_003483883.1|	-	2e-14	53.2	0.2	5.2e-14	51.8	0.2	1.7	1	0	0	1	1	1	1	KH	domain
KH_1	PF00013.29	gi|289597187|ref|YP_003483883.1|	-	0.0016	18.2	0.8	0.077	12.8	0.2	2.7	2	0	0	2	2	2	1	KH	domain
Ribosomal_L22	PF00237.19	gi|289597188|ref|YP_003483884.1|	-	3.8e-30	104.2	0.1	4.6e-30	103.9	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L22p/L17e
Ribosomal_S19	PF00203.21	gi|289597189|ref|YP_003483885.1|	-	5.6e-30	103.1	0.5	1.1e-29	102.1	0.5	1.5	1	0	0	1	1	1	1	Ribosomal	protein	S19
Citrate_synt	PF00285.21	gi|289597189|ref|YP_003483885.1|	-	0.15	11.1	0.1	0.24	10.5	0.1	1.3	1	1	1	2	2	2	0	Citrate	synthase,	C-terminal	domain
Ribosomal_L2_C	PF03947.18	gi|289597190|ref|YP_003483886.1|	-	5.5e-44	149.4	2.3	8.8e-44	148.7	2.3	1.3	1	0	0	1	1	1	1	Ribosomal	Proteins	L2,	C-terminal	domain
Ribosomal_L2	PF00181.23	gi|289597190|ref|YP_003483886.1|	-	7.7e-14	51.4	0.0	2.1e-13	50.0	0.0	1.8	1	0	0	1	1	1	1	Ribosomal	Proteins	L2,	RNA	binding	domain
Ribosomal_L23	PF00276.20	gi|289597191|ref|YP_003483887.1|	-	3.3e-18	65.8	8.5	8.8e-17	61.3	8.5	2.0	1	1	0	1	1	1	1	Ribosomal	protein	L23
RHH_7	PF16777.5	gi|289597191|ref|YP_003483887.1|	-	0.0074	16.7	0.9	0.011	16.1	0.8	1.5	1	1	0	1	1	1	1	Transcriptional	regulator,	RHH-like,	CopG
Ribosomal_L4	PF00573.22	gi|289597192|ref|YP_003483888.1|	-	1.8e-37	128.9	0.2	2e-37	128.7	0.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L4/L1	family
Ribosomal_L3	PF00297.22	gi|289597193|ref|YP_003483889.1|	-	3.8e-89	299.2	0.8	5.5e-88	295.4	0.8	1.9	1	1	0	1	1	1	1	Ribosomal	protein	L3
Urocanase_C	PF17392.2	gi|289597194|ref|YP_003483890.1|	-	2.2e-93	311.2	0.1	3.9e-93	310.4	0.1	1.4	1	0	0	1	1	1	1	Urocanase	C-terminal	domain
Urocanase	PF01175.18	gi|289597194|ref|YP_003483890.1|	-	1.3e-91	306.0	0.0	1.8e-91	305.5	0.0	1.2	1	0	0	1	1	1	1	Urocanase	Rossmann-like	domain
Urocanase_N	PF17391.2	gi|289597194|ref|YP_003483890.1|	-	6.8e-62	206.8	0.0	2.2e-61	205.2	0.0	1.8	2	0	0	2	2	2	1	Urocanase	N-terminal	domain
DUF896	PF05979.12	gi|289597194|ref|YP_003483890.1|	-	0.17	11.8	0.0	0.48	10.3	0.0	1.7	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF896)
CRS1_YhbY	PF01985.21	gi|289597195|ref|YP_003483891.1|	-	4.2e-13	49.3	2.5	4.5e-13	49.2	2.5	1.0	1	0	0	1	1	1	1	CRS1	/	YhbY	(CRM)	domain
DUF3811	PF11656.8	gi|289597195|ref|YP_003483891.1|	-	0.0019	18.6	1.1	0.0019	18.5	1.1	1.1	1	0	0	1	1	1	1	YjbD	family	(DUF3811)
CelTOS	PF18659.1	gi|289597195|ref|YP_003483891.1|	-	0.012	16.1	1.1	0.013	16.0	1.1	1.1	1	0	0	1	1	1	0	Cell-traversal	protein	for	ookinetes	and	sporozoites
zf-CHC2	PF01807.20	gi|289597195|ref|YP_003483891.1|	-	0.022	14.6	0.1	0.028	14.2	0.1	1.3	1	0	0	1	1	1	0	CHC2	zinc	finger
ProRS-C_2	PF09181.10	gi|289597195|ref|YP_003483891.1|	-	0.05	13.7	2.5	0.084	13.0	2.5	1.6	1	1	0	1	1	1	0	Prolyl-tRNA	synthetase,	C-terminal
Bap31_Bap29_C	PF18035.1	gi|289597195|ref|YP_003483891.1|	-	0.05	13.6	3.8	0.076	13.0	3.8	1.2	1	0	0	1	1	1	0	Bap31/Bap29	cytoplasmic	coiled-coil	domain
SbcD_C	PF12320.8	gi|289597195|ref|YP_003483891.1|	-	0.05	13.9	0.0	0.05	13.9	0.0	1.2	1	0	0	1	1	1	0	Type	5	capsule	protein	repressor	C-terminal	domain
Cas_APE2256	PF09651.10	gi|289597195|ref|YP_003483891.1|	-	0.063	13.2	0.2	0.072	13.0	0.2	1.1	1	0	0	1	1	1	0	CRISPR-associated	protein	(Cas_APE2256)
HIT	PF01230.23	gi|289597196|ref|YP_003483892.1|	-	2.7e-13	50.5	0.0	4.9e-13	49.7	0.0	1.4	1	0	0	1	1	1	1	HIT	domain
DcpS_C	PF11969.8	gi|289597196|ref|YP_003483892.1|	-	2e-09	37.9	0.0	3.5e-09	37.1	0.0	1.4	1	0	0	1	1	1	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
CwfJ_C_1	PF04677.15	gi|289597196|ref|YP_003483892.1|	-	2.7e-08	33.7	0.1	4.1e-08	33.1	0.1	1.4	1	1	0	1	1	1	1	Protein	similar	to	CwfJ	C-terminus	1
PseudoU_synth_1	PF01416.20	gi|289597197|ref|YP_003483893.1|	-	2.1e-12	47.5	0.0	3.8e-09	37.0	0.0	2.7	2	1	0	2	2	2	2	tRNA	pseudouridine	synthase
HTH_5	PF01022.20	gi|289597198|ref|YP_003483894.1|	-	1.5e-11	44.0	0.1	6.5e-11	41.9	0.0	2.2	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.7	gi|289597198|ref|YP_003483894.1|	-	3.3e-08	33.5	0.0	7.2e-08	32.4	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR	PF01047.22	gi|289597198|ref|YP_003483894.1|	-	2.6e-07	30.4	0.1	7.7e-07	29.0	0.1	1.8	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.6	gi|289597198|ref|YP_003483894.1|	-	2.7e-07	30.1	1.4	5.9e-07	29.0	0.1	2.3	2	1	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_38	PF13936.6	gi|289597198|ref|YP_003483894.1|	-	1.6e-06	27.8	0.3	3.4e-06	26.7	0.3	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_11	PF08279.12	gi|289597198|ref|YP_003483894.1|	-	2e-06	27.6	0.3	2e-06	27.6	0.3	2.7	3	1	0	3	3	3	1	HTH	domain
MarR_2	PF12802.7	gi|289597198|ref|YP_003483894.1|	-	1.3e-05	25.0	0.0	3.1e-05	23.8	0.0	1.5	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.19	gi|289597198|ref|YP_003483894.1|	-	2.1e-05	24.3	0.0	4.9e-05	23.1	0.0	1.6	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.10	gi|289597198|ref|YP_003483894.1|	-	0.00053	19.7	0.4	0.0027	17.5	0.0	2.3	3	0	0	3	3	3	1	IclR	helix-turn-helix	domain
HTH_29	PF13551.6	gi|289597198|ref|YP_003483894.1|	-	0.00095	19.1	0.1	0.0029	17.6	0.0	1.8	2	0	0	2	2	2	1	Winged	helix-turn	helix
HTH_36	PF13730.6	gi|289597198|ref|YP_003483894.1|	-	0.0031	17.4	0.2	0.01	15.8	0.0	2.0	3	0	0	3	3	1	1	Helix-turn-helix	domain
HTH_23	PF13384.6	gi|289597198|ref|YP_003483894.1|	-	0.0034	17.1	0.0	0.037	13.8	0.0	2.4	2	0	0	2	2	2	1	Homeodomain-like	domain
IF2_N	PF04760.15	gi|289597198|ref|YP_003483894.1|	-	0.0041	16.9	0.9	1.2	9.0	0.1	2.9	2	0	0	2	2	2	1	Translation	initiation	factor	IF-2,	N-terminal	region
B-block_TFIIIC	PF04182.12	gi|289597198|ref|YP_003483894.1|	-	0.0042	17.2	0.1	0.022	14.9	0.0	2.2	2	0	0	2	2	2	1	B-block	binding	subunit	of	TFIIIC
HTH_Crp_2	PF13545.6	gi|289597198|ref|YP_003483894.1|	-	0.01	15.8	2.6	0.02	14.8	0.1	2.6	3	0	0	3	3	2	0	Crp-like	helix-turn-helix	domain
Sigma70_r4_2	PF08281.12	gi|289597198|ref|YP_003483894.1|	-	0.013	15.2	0.1	0.083	12.6	0.0	2.2	2	0	0	2	2	2	0	Sigma-70,	region	4
HTH_27	PF13463.6	gi|289597198|ref|YP_003483894.1|	-	0.019	15.5	0.0	0.051	14.1	0.0	1.8	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_28	PF13518.6	gi|289597198|ref|YP_003483894.1|	-	0.025	14.7	0.0	0.057	13.6	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
Fe_dep_repress	PF01325.19	gi|289597198|ref|YP_003483894.1|	-	0.028	14.6	0.0	0.064	13.5	0.0	1.6	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_34	PF13601.6	gi|289597198|ref|YP_003483894.1|	-	0.031	14.5	1.4	0.057	13.6	0.0	2.2	3	0	0	3	3	3	0	Winged	helix	DNA-binding	domain
HTH_40	PF14493.6	gi|289597198|ref|YP_003483894.1|	-	0.052	14.0	2.2	0.63	10.5	2.0	2.5	1	1	0	1	1	1	0	Helix-turn-helix	domain
UPF0047	PF01894.17	gi|289597199|ref|YP_003483895.1|	-	3.6e-33	114.1	0.0	4.1e-33	113.9	0.0	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0047
GYD	PF08734.11	gi|289597200|ref|YP_003483896.1|	-	0.00048	20.0	0.0	0.00048	20.0	0.0	1.2	1	0	0	1	1	1	1	GYD	domain
Lipase_GDSL_lke	PF16255.5	gi|289597200|ref|YP_003483896.1|	-	0.18	11.1	0.0	0.22	10.9	0.0	1.1	1	0	0	1	1	1	0	GDSL-like	Lipase/Acylhydrolase
Peptidase_S9	PF00326.21	gi|289597201|ref|YP_003483897.1|	-	8.2e-55	185.6	0.0	1.3e-54	184.9	0.0	1.3	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
Peptidase_S15	PF02129.18	gi|289597201|ref|YP_003483897.1|	-	2e-13	50.6	0.1	1.9e-09	37.5	0.2	2.2	1	1	1	2	2	2	2	X-Pro	dipeptidyl-peptidase	(S15	family)
AXE1	PF05448.12	gi|289597201|ref|YP_003483897.1|	-	2.8e-07	29.5	0.9	5.5e-05	22.0	0.4	3.2	1	1	1	2	2	2	1	Acetyl	xylan	esterase	(AXE1)
DLH	PF01738.18	gi|289597201|ref|YP_003483897.1|	-	2.7e-06	27.1	0.0	5.2e-06	26.2	0.0	1.5	1	0	0	1	1	1	1	Dienelactone	hydrolase	family
Abhydrolase_1	PF00561.20	gi|289597201|ref|YP_003483897.1|	-	3.2e-06	27.0	0.1	7.5e-06	25.8	0.1	1.6	1	1	0	1	1	1	1	alpha/beta	hydrolase	fold
BAAT_C	PF08840.11	gi|289597201|ref|YP_003483897.1|	-	5.3e-06	26.5	0.0	0.00057	19.9	0.0	2.4	1	1	0	1	1	1	1	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
Hydrolase_4	PF12146.8	gi|289597201|ref|YP_003483897.1|	-	6.7e-06	25.5	0.1	0.0018	17.6	0.0	2.2	2	0	0	2	2	2	2	Serine	aminopeptidase,	S33
Peptidase_S9_N	PF02897.15	gi|289597201|ref|YP_003483897.1|	-	0.0098	14.7	3.5	0.025	13.4	0.7	2.5	3	0	0	3	3	3	1	Prolyl	oligopeptidase,	N-terminal	beta-propeller	domain
Esterase	PF00756.20	gi|289597201|ref|YP_003483897.1|	-	0.025	14.2	0.0	0.044	13.4	0.0	1.3	1	0	0	1	1	1	0	Putative	esterase
PD40	PF07676.12	gi|289597201|ref|YP_003483897.1|	-	0.048	13.6	0.0	0.16	11.9	0.0	1.9	2	0	0	2	2	1	0	WD40-like	Beta	Propeller	Repeat
Abhydrolase_3	PF07859.13	gi|289597201|ref|YP_003483897.1|	-	0.075	12.9	0.0	0.27	11.1	0.0	1.8	1	1	1	2	2	2	0	alpha/beta	hydrolase	fold
Abhydrolase_2	PF02230.16	gi|289597201|ref|YP_003483897.1|	-	0.15	11.9	0.0	0.49	10.2	0.0	1.8	2	0	0	2	2	2	0	Phospholipase/Carboxylesterase
DUF1667	PF07892.11	gi|289597202|ref|YP_003483898.1|	-	4.2e-31	106.8	1.7	5.1e-31	106.6	1.7	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1667)
Pyr_redox_2	PF07992.14	gi|289597203|ref|YP_003483899.1|	-	7e-34	117.4	0.9	9.2e-34	117.0	0.9	1.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.6	gi|289597203|ref|YP_003483899.1|	-	2.3e-15	56.7	0.6	3.8e-08	32.9	0.0	2.4	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.27	gi|289597203|ref|YP_003483899.1|	-	1.5e-13	51.1	1.6	2.1e-05	25.0	0.1	3.5	3	0	0	3	3	3	3	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_oxidored	PF12831.7	gi|289597203|ref|YP_003483899.1|	-	4.5e-10	39.5	2.6	2.6e-09	37.0	0.1	2.8	2	2	0	2	2	2	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.24	gi|289597203|ref|YP_003483899.1|	-	5.2e-10	39.0	7.2	8.2e-07	28.4	0.4	4.2	2	2	3	5	5	5	2	FAD	binding	domain
NAD_binding_8	PF13450.6	gi|289597203|ref|YP_003483899.1|	-	6.8e-09	35.8	0.1	3.2e-05	24.1	0.0	2.4	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.14	gi|289597203|ref|YP_003483899.1|	-	1.8e-08	33.6	5.2	8.8e-07	28.0	0.1	3.8	3	1	1	4	4	4	1	HI0933-like	protein
DAO	PF01266.24	gi|289597203|ref|YP_003483899.1|	-	1.6e-06	28.0	7.1	0.19	11.3	0.3	4.1	3	1	1	4	4	4	2	FAD	dependent	oxidoreductase
GIDA	PF01134.22	gi|289597203|ref|YP_003483899.1|	-	4.5e-06	26.0	6.9	8.1e-05	21.9	0.2	3.7	4	1	0	5	5	5	1	Glucose	inhibited	division	protein	A
Thi4	PF01946.17	gi|289597203|ref|YP_003483899.1|	-	9.5e-06	25.0	1.7	0.0077	15.5	0.1	2.5	2	0	0	2	2	2	2	Thi4	family
FAD_binding_3	PF01494.19	gi|289597203|ref|YP_003483899.1|	-	0.00032	20.0	0.9	0.052	12.8	0.1	2.3	2	0	0	2	2	2	2	FAD	binding	domain
Lycopene_cycl	PF05834.12	gi|289597203|ref|YP_003483899.1|	-	0.00053	19.1	4.9	0.025	13.7	0.1	3.5	4	0	0	4	4	4	1	Lycopene	cyclase	protein
NAD_binding_7	PF13241.6	gi|289597203|ref|YP_003483899.1|	-	0.0017	18.8	0.1	0.081	13.4	0.0	2.4	2	0	0	2	2	2	1	Putative	NAD(P)-binding
AlaDh_PNT_C	PF01262.21	gi|289597203|ref|YP_003483899.1|	-	0.0034	16.7	4.3	0.014	14.7	0.0	2.5	2	1	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
2-Hacid_dh_C	PF02826.19	gi|289597203|ref|YP_003483899.1|	-	0.14	11.5	1.2	2.8	7.3	0.5	2.5	2	0	0	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
DAO	PF01266.24	gi|289597204|ref|YP_003483900.1|	-	3.3e-67	227.6	0.0	3.9e-67	227.3	0.0	1.1	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Fer2_BFD	PF04324.15	gi|289597204|ref|YP_003483900.1|	-	1.2e-14	54.4	2.2	3e-14	53.1	2.2	1.8	1	0	0	1	1	1	1	BFD-like	[2Fe-2S]	binding	domain
Pyr_redox	PF00070.27	gi|289597204|ref|YP_003483900.1|	-	4.6e-08	33.5	0.7	0.0012	19.4	0.1	3.1	3	0	0	3	3	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.6	gi|289597204|ref|YP_003483900.1|	-	1.7e-07	31.3	0.0	3.5e-07	30.4	0.0	1.6	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_2	PF07992.14	gi|289597204|ref|YP_003483900.1|	-	2.2e-07	30.4	0.1	0.00012	21.4	0.0	2.3	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.17	gi|289597204|ref|YP_003483900.1|	-	7.4e-06	25.4	2.8	1.5e-05	24.4	0.1	2.5	3	0	0	3	3	3	1	Thi4	family
TrkA_N	PF02254.18	gi|289597204|ref|YP_003483900.1|	-	0.00012	22.3	0.1	0.00036	20.8	0.1	1.8	1	0	0	1	1	1	1	TrkA-N	domain
Trp_halogenase	PF04820.14	gi|289597204|ref|YP_003483900.1|	-	0.00019	20.4	0.9	0.15	10.9	0.0	2.1	2	0	0	2	2	2	2	Tryptophan	halogenase
FAD_binding_2	PF00890.24	gi|289597204|ref|YP_003483900.1|	-	0.00044	19.5	0.0	0.1	11.6	0.1	2.2	2	0	0	2	2	2	2	FAD	binding	domain
HI0933_like	PF03486.14	gi|289597204|ref|YP_003483900.1|	-	0.0016	17.2	0.0	0.09	11.5	0.1	2.3	2	0	0	2	2	2	1	HI0933-like	protein
NAD_binding_9	PF13454.6	gi|289597204|ref|YP_003483900.1|	-	0.0062	16.5	0.0	0.0098	15.9	0.0	1.3	1	0	0	1	1	1	1	FAD-NAD(P)-binding
Lycopene_cycl	PF05834.12	gi|289597204|ref|YP_003483900.1|	-	0.01	14.9	0.0	0.039	13.0	0.0	2.0	2	0	0	2	2	2	0	Lycopene	cyclase	protein
Pyr_redox_3	PF13738.6	gi|289597204|ref|YP_003483900.1|	-	0.011	15.0	0.2	0.1	11.8	0.1	2.1	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Sacchrp_dh_NADP	PF03435.18	gi|289597204|ref|YP_003483900.1|	-	0.013	15.8	0.1	0.034	14.4	0.1	1.7	1	0	0	1	1	1	0	Saccharopine	dehydrogenase	NADP	binding	domain
FAD_binding_3	PF01494.19	gi|289597204|ref|YP_003483900.1|	-	0.013	14.8	0.0	0.021	14.1	0.0	1.3	1	0	0	1	1	1	0	FAD	binding	domain
K_oxygenase	PF13434.6	gi|289597204|ref|YP_003483900.1|	-	0.018	14.2	0.0	0.027	13.6	0.0	1.2	1	0	0	1	1	1	0	L-lysine	6-monooxygenase	(NADPH-requiring)
PP_kinase_C	PF13090.6	gi|289597204|ref|YP_003483900.1|	-	0.023	14.2	0.1	0.046	13.2	0.1	1.4	1	0	0	1	1	1	0	Polyphosphate	kinase	C-terminal	domain	2
Shikimate_DH	PF01488.20	gi|289597204|ref|YP_003483900.1|	-	0.023	14.7	0.1	0.043	13.9	0.1	1.4	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
DUF1188	PF06690.11	gi|289597204|ref|YP_003483900.1|	-	0.072	12.6	0.0	0.13	11.8	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1188)
FKBP_C	PF00254.28	gi|289597205|ref|YP_003483901.1|	-	4.3e-16	59.0	0.0	1e-15	57.8	0.0	1.8	1	1	0	1	1	1	1	FKBP-type	peptidyl-prolyl	cis-trans	isomerase
PA-IL	PF07828.12	gi|289597205|ref|YP_003483901.1|	-	0.087	12.8	0.0	0.21	11.6	0.0	1.7	1	0	0	1	1	1	0	PA-IL-like	protein
RNA_binding	PF01877.17	gi|289597206|ref|YP_003483902.1|	-	6.6e-30	103.8	1.0	8.2e-30	103.5	1.0	1.1	1	0	0	1	1	1	1	RNA	binding
TrmB	PF01978.19	gi|289597207|ref|YP_003483903.1|	-	2.2e-20	72.3	0.6	5.8e-20	71.0	0.1	2.0	2	1	1	3	3	3	1	Sugar-specific	transcriptional	regulator	TrmB
Regulator_TrmB	PF11495.8	gi|289597207|ref|YP_003483903.1|	-	3.1e-07	29.8	0.1	4.7e-07	29.2	0.1	1.3	1	0	0	1	1	1	1	Archaeal	transcriptional	regulator	TrmB
Rrf2	PF02082.20	gi|289597207|ref|YP_003483903.1|	-	0.0016	18.7	0.2	0.0068	16.7	0.0	2.2	2	0	0	2	2	2	1	Transcriptional	regulator
DUF1863	PF08937.11	gi|289597207|ref|YP_003483903.1|	-	0.0032	17.8	0.1	0.0053	17.1	0.1	1.4	1	0	0	1	1	1	1	MTH538	TIR-like	domain	(DUF1863)
DUF5445	PF17520.2	gi|289597207|ref|YP_003483903.1|	-	0.0049	16.7	0.0	0.01	15.7	0.0	1.5	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF5445)
PLDc_2	PF13091.6	gi|289597207|ref|YP_003483903.1|	-	0.015	15.2	0.1	0.036	14.0	0.0	1.8	2	0	0	2	2	2	0	PLD-like	domain
Borrelia_lipo_1	PF05714.11	gi|289597207|ref|YP_003483903.1|	-	0.029	14.1	6.4	0.33	10.7	6.4	2.4	1	1	0	1	1	1	0	Borrelia	burgdorferi	virulent	strain	associated	lipoprotein
MarR	PF01047.22	gi|289597207|ref|YP_003483903.1|	-	0.048	13.6	0.2	0.29	11.1	0.0	2.4	3	0	0	3	3	3	0	MarR	family
TBPIP	PF07106.13	gi|289597207|ref|YP_003483903.1|	-	0.049	13.6	0.6	2.5	8.1	0.0	3.0	3	1	0	3	3	3	0	TBPIP/Hop2	winged	helix	domain
DUF2250	PF10007.9	gi|289597207|ref|YP_003483903.1|	-	0.05	13.7	0.7	1.7	8.8	0.0	2.7	2	1	1	3	3	3	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_IclR	PF09339.10	gi|289597207|ref|YP_003483903.1|	-	0.056	13.3	0.0	0.15	11.9	0.0	1.7	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
DUF61	PF01886.16	gi|289597207|ref|YP_003483903.1|	-	0.091	12.8	4.8	0.15	12.1	4.8	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF61
PadR	PF03551.14	gi|289597207|ref|YP_003483903.1|	-	0.098	12.6	0.0	0.33	10.9	0.0	1.9	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
PhdYeFM_antitox	PF02604.19	gi|289597207|ref|YP_003483903.1|	-	0.11	12.3	1.4	5.2	7.0	0.0	3.0	3	1	0	3	3	3	0	Antitoxin	Phd_YefM,	type	II	toxin-antitoxin	system
HTH_11	PF08279.12	gi|289597207|ref|YP_003483903.1|	-	0.12	12.3	1.3	0.31	11.0	0.0	2.4	3	0	0	3	3	3	0	HTH	domain
Rad50_zn_hook	PF04423.14	gi|289597207|ref|YP_003483903.1|	-	2.5	8.0	7.6	47	3.9	1.2	3.5	3	0	0	3	3	3	0	Rad50	zinc	hook	motif
SUV3_C	PF12513.8	gi|289597207|ref|YP_003483903.1|	-	8.7	6.4	7.3	1.6	8.8	0.2	3.2	4	0	0	4	4	4	0	Mitochondrial	degradasome	RNA	helicase	subunit	C	terminal
Response_reg	PF00072.24	gi|289597208|ref|YP_003483904.1|	-	4e-24	84.9	0.8	4.5e-24	84.8	0.8	1.0	1	0	0	1	1	1	1	Response	regulator	receiver	domain
TrkA_N	PF02254.18	gi|289597208|ref|YP_003483904.1|	-	0.027	14.7	0.5	0.058	13.6	0.5	1.5	1	1	0	1	1	1	0	TrkA-N	domain
DUF2322	PF10084.9	gi|289597208|ref|YP_003483904.1|	-	0.05	13.7	0.0	0.082	13.0	0.0	1.5	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2322)
Amidohydro_3	PF07969.11	gi|289597209|ref|YP_003483905.1|	-	6.6e-53	180.8	0.0	4.1e-52	178.2	0.0	1.9	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_1	PF01979.20	gi|289597209|ref|YP_003483905.1|	-	2.8e-12	46.6	0.0	8.8e-09	35.1	0.0	3.0	2	1	0	2	2	2	2	Amidohydrolase	family
PGM_PMM_I	PF02878.16	gi|289597210|ref|YP_003483906.1|	-	5.5e-41	139.5	0.0	1.2e-40	138.4	0.0	1.6	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_II	PF02879.16	gi|289597210|ref|YP_003483906.1|	-	5.5e-32	110.5	0.1	1.7e-31	108.9	0.0	1.9	2	0	0	2	2	2	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_III	PF02880.16	gi|289597210|ref|YP_003483906.1|	-	1.5e-30	105.7	0.0	3.1e-30	104.7	0.0	1.5	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_IV	PF00408.20	gi|289597210|ref|YP_003483906.1|	-	4.3e-11	42.8	0.1	1.2e-10	41.4	0.1	1.7	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
Na_H_Exchanger	PF00999.21	gi|289597211|ref|YP_003483907.1|	-	1.4e-22	80.0	50.2	1.9e-22	79.6	50.2	1.0	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
AFOR_C	PF01314.18	gi|289597212|ref|YP_003483908.1|	-	8e-140	466.2	0.0	1e-139	465.8	0.0	1.1	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	domains	2	&	3
AFOR_N	PF02730.15	gi|289597212|ref|YP_003483908.1|	-	1.8e-80	269.5	0.7	2.8e-80	268.9	0.7	1.3	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
ThiS	PF02597.20	gi|289597213|ref|YP_003483909.1|	-	1.9e-19	70.1	0.2	2.1e-19	70.0	0.2	1.0	1	0	0	1	1	1	1	ThiS	family
Radical_SAM	PF04055.21	gi|289597214|ref|YP_003483910.1|	-	2.2e-17	63.9	0.1	3.1e-17	63.5	0.1	1.2	1	0	0	1	1	1	1	Radical	SAM	superfamily
SPASM	PF13186.6	gi|289597214|ref|YP_003483910.1|	-	3.2e-15	56.4	0.3	1.2e-14	54.6	0.3	2.0	1	0	0	1	1	1	1	Iron-sulfur	cluster-binding	domain
Fer4_12	PF13353.6	gi|289597214|ref|YP_003483910.1|	-	1.8e-06	28.3	0.1	1e-05	25.8	0.0	2.1	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.6	gi|289597214|ref|YP_003483910.1|	-	3.7e-06	27.1	0.0	7.1e-06	26.1	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
IF-2B	PF01008.17	gi|289597215|ref|YP_003483911.1|	-	2.4e-79	266.5	0.0	3.1e-79	266.1	0.0	1.1	1	0	0	1	1	1	1	Initiation	factor	2	subunit	family
DSPc	PF00782.20	gi|289597215|ref|YP_003483911.1|	-	0.041	13.7	0.0	9.1	6.1	0.0	2.9	2	1	1	3	3	3	0	Dual	specificity	phosphatase,	catalytic	domain
ATPase	PF06745.13	gi|289597217|ref|YP_003483913.1|	-	2.6e-44	151.3	0.1	2.9e-44	151.1	0.1	1.0	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.6	gi|289597217|ref|YP_003483913.1|	-	1.2e-11	44.6	0.0	1.5e-11	44.2	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
DnaB_C	PF03796.15	gi|289597217|ref|YP_003483913.1|	-	2.8e-08	33.4	0.0	5.6e-08	32.4	0.0	1.5	1	1	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
RecA	PF00154.21	gi|289597217|ref|YP_003483913.1|	-	0.00022	20.8	0.0	0.0019	17.7	0.0	2.0	2	0	0	2	2	2	1	recA	bacterial	DNA	recombination	protein
Rad51	PF08423.11	gi|289597217|ref|YP_003483913.1|	-	0.0008	18.7	0.0	0.0024	17.2	0.0	1.6	1	1	0	1	1	1	1	Rad51
T2SSE	PF00437.20	gi|289597217|ref|YP_003483913.1|	-	0.0053	15.8	0.0	0.0077	15.3	0.0	1.2	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_14	PF13173.6	gi|289597217|ref|YP_003483913.1|	-	0.036	14.1	0.1	0.16	12.0	0.1	2.1	1	1	0	1	1	1	0	AAA	domain
TPR_12	PF13424.6	gi|289597218|ref|YP_003483914.1|	-	9.8e-50	166.8	25.0	2.9e-14	53.1	0.3	7.1	7	1	0	7	7	6	6	Tetratricopeptide	repeat
TPR_1	PF00515.28	gi|289597218|ref|YP_003483914.1|	-	4.3e-33	111.8	44.0	3.4e-08	33.0	0.1	11.9	12	1	0	12	12	11	7	Tetratricopeptide	repeat
AAA_16	PF13191.6	gi|289597218|ref|YP_003483914.1|	-	1.6e-24	87.2	0.0	5.4e-14	52.9	0.0	2.9	2	1	0	2	2	2	2	AAA	ATPase	domain
TPR_2	PF07719.17	gi|289597218|ref|YP_003483914.1|	-	2.8e-24	83.2	51.6	2.1e-05	24.3	0.7	13.4	13	1	0	13	13	12	6	Tetratricopeptide	repeat
TPR_MalT	PF17874.1	gi|289597218|ref|YP_003483914.1|	-	2.3e-21	76.5	0.2	1.4e-08	34.6	0.0	3.9	1	1	4	5	5	5	5	MalT-like	TPR	region
TPR_7	PF13176.6	gi|289597218|ref|YP_003483914.1|	-	6.3e-21	72.8	22.1	2.5e-05	24.0	0.0	10.5	11	0	0	11	11	9	5	Tetratricopeptide	repeat
DUF835	PF05763.12	gi|289597218|ref|YP_003483914.1|	-	2.4e-18	66.2	1.9	9.2e-11	41.6	0.2	3.5	2	1	1	3	3	3	2	Protein	of	unknown	function	(DUF835)
TPR_8	PF13181.6	gi|289597218|ref|YP_003483914.1|	-	2.5e-18	64.7	52.5	1.6e-05	24.7	0.3	11.5	11	1	0	11	11	11	4	Tetratricopeptide	repeat
TPR_10	PF13374.6	gi|289597218|ref|YP_003483914.1|	-	4e-16	58.3	18.1	1.4e-05	24.8	0.1	8.7	10	0	0	10	10	8	3	Tetratricopeptide	repeat
TPR_14	PF13428.6	gi|289597218|ref|YP_003483914.1|	-	1.1e-12	47.6	4.9	0.35	11.8	0.0	9.3	10	1	1	11	11	8	2	Tetratricopeptide	repeat
SNAP	PF14938.6	gi|289597218|ref|YP_003483914.1|	-	2.1e-11	43.8	26.6	2.1e-05	24.1	2.2	4.3	2	1	1	4	4	4	3	Soluble	NSF	attachment	protein,	SNAP
TPR_19	PF14559.6	gi|289597218|ref|YP_003483914.1|	-	8.8e-10	39.0	13.0	0.032	14.7	0.0	7.3	5	2	2	7	7	6	3	Tetratricopeptide	repeat
TPR_9	PF13371.6	gi|289597218|ref|YP_003483914.1|	-	3.6e-07	30.2	0.2	0.54	10.4	0.0	6.2	4	2	4	8	8	6	1	Tetratricopeptide	repeat
TPR_16	PF13432.6	gi|289597218|ref|YP_003483914.1|	-	3.7e-07	30.7	1.4	0.012	16.2	0.0	5.7	5	2	2	7	7	5	2	Tetratricopeptide	repeat
RPN7	PF10602.9	gi|289597218|ref|YP_003483914.1|	-	3.7e-07	30.0	28.5	0.013	15.2	0.1	6.1	1	1	4	6	6	6	3	26S	proteasome	subunit	RPN7
ANAPC5	PF12862.7	gi|289597218|ref|YP_003483914.1|	-	3.2e-05	23.9	6.9	0.058	13.5	0.1	4.3	1	1	2	3	3	3	2	Anaphase-promoting	complex	subunit	5
TPR_6	PF13174.6	gi|289597218|ref|YP_003483914.1|	-	3.3e-05	24.2	22.4	0.28	11.9	0.1	9.7	11	1	0	11	11	8	1	Tetratricopeptide	repeat
AAA_22	PF13401.6	gi|289597218|ref|YP_003483914.1|	-	9.7e-05	22.7	0.6	0.002	18.4	0.0	2.9	3	0	0	3	3	2	1	AAA	domain
Foie-gras_1	PF11817.8	gi|289597218|ref|YP_003483914.1|	-	0.00032	20.4	12.7	0.067	12.8	0.2	4.0	2	1	2	4	4	4	2	Foie	gras	liver	health	family	1
ANAPC3	PF12895.7	gi|289597218|ref|YP_003483914.1|	-	0.00035	20.7	29.3	0.087	13.1	1.4	7.1	5	3	1	6	6	6	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
AAA_14	PF13173.6	gi|289597218|ref|YP_003483914.1|	-	0.0006	19.9	0.2	0.0006	19.9	0.2	3.0	3	0	0	3	3	1	1	AAA	domain
TPR_17	PF13431.6	gi|289597218|ref|YP_003483914.1|	-	0.0019	18.4	15.0	0.35	11.4	0.1	7.6	8	0	0	8	8	7	1	Tetratricopeptide	repeat
NB-ARC	PF00931.22	gi|289597218|ref|YP_003483914.1|	-	0.0027	17.0	0.1	0.46	9.6	0.1	2.5	2	0	0	2	2	2	1	NB-ARC	domain
AAA	PF00004.29	gi|289597218|ref|YP_003483914.1|	-	0.003	18.0	0.0	0.011	16.1	0.0	2.0	2	0	0	2	2	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF2791	PF10923.8	gi|289597218|ref|YP_003483914.1|	-	0.0096	14.8	0.0	0.021	13.7	0.0	1.5	1	0	0	1	1	1	1	P-loop	Domain	of	unknown	function	(DUF2791)
UPF0262	PF06793.12	gi|289597218|ref|YP_003483914.1|	-	0.024	14.8	0.5	0.2	11.7	0.3	2.7	3	0	0	3	3	1	0	Uncharacterised	protein	family	(UPF0262)
DUF5113	PF17140.4	gi|289597218|ref|YP_003483914.1|	-	0.03	14.2	20.5	0.23	11.3	0.5	6.4	3	2	5	8	8	8	0	Domain	of	unknown	function	(DUF5113)
TniB	PF05621.11	gi|289597218|ref|YP_003483914.1|	-	0.034	13.5	0.0	0.09	12.2	0.0	1.7	1	0	0	1	1	1	0	Bacterial	TniB	protein
AAA_24	PF13479.6	gi|289597218|ref|YP_003483914.1|	-	0.038	13.7	0.2	0.15	11.8	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
STAS	PF01740.21	gi|289597218|ref|YP_003483914.1|	-	0.072	12.7	0.1	0.82	9.3	0.0	2.7	2	1	1	3	3	3	0	STAS	domain
Rapsyn_N	PF10579.9	gi|289597218|ref|YP_003483914.1|	-	0.11	12.6	9.3	7.7	6.7	0.0	6.2	6	1	0	6	6	6	0	Rapsyn	N-terminal	myristoylation	and	linker	region
RsgA_GTPase	PF03193.16	gi|289597218|ref|YP_003483914.1|	-	0.12	12.3	0.0	0.56	10.1	0.0	2.2	1	0	0	1	1	1	0	RsgA	GTPase
NACHT	PF05729.12	gi|289597218|ref|YP_003483914.1|	-	0.14	12.1	0.0	0.32	10.9	0.0	1.6	1	0	0	1	1	1	0	NACHT	domain
AAA_30	PF13604.6	gi|289597218|ref|YP_003483914.1|	-	0.16	11.6	0.0	0.34	10.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
TPR_3	PF07720.12	gi|289597218|ref|YP_003483914.1|	-	0.35	10.9	8.1	22	5.2	0.3	5.0	5	0	0	5	5	4	0	Tetratricopeptide	repeat
AdoHcyase	PF05221.17	gi|289597219|ref|YP_003483915.1|	-	2.8e-56	190.8	0.0	7.3e-29	100.9	0.0	2.0	1	1	1	2	2	2	2	S-adenosyl-L-homocysteine	hydrolase
AdoHcyase_NAD	PF00670.21	gi|289597219|ref|YP_003483915.1|	-	2e-49	167.8	1.6	7.3e-49	166.0	1.4	1.9	2	0	0	2	2	2	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
IlvN	PF07991.12	gi|289597219|ref|YP_003483915.1|	-	3e-09	36.7	0.4	2.4e-08	33.7	0.2	2.1	2	0	0	2	2	2	1	Acetohydroxy	acid	isomeroreductase,	NADPH-binding	domain
2-Hacid_dh_C	PF02826.19	gi|289597219|ref|YP_003483915.1|	-	4e-08	32.8	0.6	9.9e-08	31.5	0.5	1.7	1	1	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
TrkA_N	PF02254.18	gi|289597219|ref|YP_003483915.1|	-	0.00019	21.7	0.7	0.0032	17.7	0.3	2.9	2	1	0	2	2	2	1	TrkA-N	domain
Shikimate_DH	PF01488.20	gi|289597219|ref|YP_003483915.1|	-	0.00097	19.2	0.6	0.01	15.9	0.2	2.5	2	1	1	3	3	3	1	Shikimate	/	quinate	5-dehydrogenase
3HCDH_N	PF02737.18	gi|289597219|ref|YP_003483915.1|	-	0.0018	18.2	2.6	1	9.2	1.1	3.2	3	1	0	3	3	3	2	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.17	gi|289597219|ref|YP_003483915.1|	-	0.0027	18.2	0.2	0.0065	17.0	0.2	1.6	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
THF_DHG_CYH_C	PF02882.19	gi|289597219|ref|YP_003483915.1|	-	0.0038	16.6	1.2	0.022	14.1	1.2	2.0	1	1	0	1	1	1	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
NAD_binding_7	PF13241.6	gi|289597219|ref|YP_003483915.1|	-	0.034	14.6	0.2	0.096	13.1	0.2	1.8	1	0	0	1	1	1	0	Putative	NAD(P)-binding
PDH	PF02153.17	gi|289597219|ref|YP_003483915.1|	-	0.11	11.5	0.2	0.19	10.7	0.2	1.3	1	0	0	1	1	1	0	Prephenate	dehydrogenase
MFS_1	PF07690.16	gi|289597220|ref|YP_003483916.1|	-	2.8e-41	141.6	51.6	1.1e-26	93.7	28.4	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.24	gi|289597220|ref|YP_003483916.1|	-	1.2e-33	116.6	29.4	7.8e-29	100.8	10.7	2.3	1	1	1	2	2	2	2	Sugar	(and	other)	transporter
MFS_1_like	PF12832.7	gi|289597220|ref|YP_003483916.1|	-	1.7e-06	27.2	30.7	5.9e-06	25.4	27.9	2.7	1	1	1	2	2	2	1	MFS_1	like	family
MFS_4	PF06779.14	gi|289597220|ref|YP_003483916.1|	-	5.3e-06	26.0	18.8	7.4e-06	25.5	18.8	1.1	1	0	0	1	1	1	1	Uncharacterised	MFS-type	transporter	YbfB
Mur_ligase_M	PF08245.12	gi|289597221|ref|YP_003483917.1|	-	5.9e-16	59.0	0.3	1.8e-15	57.4	0.1	1.9	2	0	0	2	2	2	1	Mur	ligase	middle	domain
Mur_ligase_C	PF02875.21	gi|289597221|ref|YP_003483917.1|	-	3.7e-06	27.1	0.1	5.8e-05	23.3	0.1	2.5	1	1	0	1	1	1	1	Mur	ligase	family,	glutamate	ligase	domain
WhiA_N	PF10298.9	gi|289597221|ref|YP_003483917.1|	-	0.035	14.1	0.4	10	6.2	0.1	3.4	2	1	1	3	3	3	0	WhiA	N-terminal	LAGLIDADG-like	domain
Glyco_hydro_10	PF00331.20	gi|289597221|ref|YP_003483917.1|	-	0.1	11.7	0.0	0.64	9.1	0.0	2.0	2	0	0	2	2	2	0	Glycosyl	hydrolase	family	10
FAM91_C	PF14648.6	gi|289597221|ref|YP_003483917.1|	-	0.22	10.3	0.5	3.8	6.2	0.1	2.1	2	0	0	2	2	2	0	FAM91	C-terminus
GTP-bdg_N	PF13167.6	gi|289597222|ref|YP_003483918.1|	-	6.8e-23	81.1	0.8	1.5e-22	80.1	0.2	1.9	2	0	0	2	2	1	1	GTP-binding	GTPase	N-terminal
GTP-bdg_M	PF16360.5	gi|289597222|ref|YP_003483918.1|	-	2.1e-17	63.5	6.3	5.9e-17	62.0	6.3	1.8	1	0	0	1	1	1	1	GTP-binding	GTPase	Middle	Region
MMR_HSR1	PF01926.23	gi|289597222|ref|YP_003483918.1|	-	1.1e-15	57.7	2.2	1.2e-15	57.6	0.1	2.2	3	1	0	3	3	3	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.18	gi|289597222|ref|YP_003483918.1|	-	1.6e-05	24.5	0.3	6.5e-05	22.5	0.3	2.0	1	1	0	1	1	1	1	Ferrous	iron	transport	protein	B
Dynamin_N	PF00350.23	gi|289597222|ref|YP_003483918.1|	-	0.0013	18.9	1.1	0.08	13.0	0.1	3.2	2	2	2	4	4	4	1	Dynamin	family
GTP_EFTU	PF00009.27	gi|289597222|ref|YP_003483918.1|	-	0.0048	16.5	3.5	0.33	10.5	0.2	2.8	2	1	1	3	3	3	2	Elongation	factor	Tu	GTP	binding	domain
MnmE_helical	PF12631.7	gi|289597222|ref|YP_003483918.1|	-	0.0072	16.5	0.0	0.021	15.0	0.0	1.7	1	1	0	1	1	1	1	MnmE	helical	domain
MMR_HSR1_Xtn	PF16897.5	gi|289597222|ref|YP_003483918.1|	-	0.0085	16.1	1.8	0.018	15.1	0.2	2.4	2	0	0	2	2	2	1	C-terminal	region	of	MMR_HSR1	domain
ABC_tran	PF00005.27	gi|289597222|ref|YP_003483918.1|	-	0.027	15.0	0.4	0.077	13.5	0.2	2.0	1	1	1	2	2	2	0	ABC	transporter
RsgA_GTPase	PF03193.16	gi|289597222|ref|YP_003483918.1|	-	0.032	14.1	1.9	3.4	7.6	0.0	3.0	3	0	0	3	3	3	0	RsgA	GTPase
CLP1_P	PF16575.5	gi|289597222|ref|YP_003483918.1|	-	0.1	12.4	2.0	29	4.4	0.2	3.6	2	1	1	3	3	3	0	mRNA	cleavage	and	polyadenylation	factor	CLP1	P-loop
Nif11	PF07862.11	gi|289597222|ref|YP_003483918.1|	-	0.12	12.7	2.8	16	5.9	0.0	3.3	4	0	0	4	4	3	0	Nif11	domain
AAA_18	PF13238.6	gi|289597222|ref|YP_003483918.1|	-	0.12	12.9	0.3	0.12	12.9	0.3	3.1	2	2	0	2	2	2	0	AAA	domain
Amidohydro_1	PF01979.20	gi|289597222|ref|YP_003483918.1|	-	0.16	11.2	0.8	8	5.7	0.1	2.8	3	1	0	3	3	3	0	Amidohydrolase	family
#
# Program:         hmmscan
# Version:         3.2.1 (June 2018)
# Pipeline mode:   SCAN
# Query file:      /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Aciduliprofundum_boonei_T469_uid43333/NC_013926.faa
# Target file:     /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm
# Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Aciduliprofundum_boonei_T469_uid43333/NC_013926.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Aciduliprofundum_boonei_T469_uid43333/NC_013926.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Euryarchaeota/Aciduliprofundum_boonei_T469_uid43333/NC_013926.faa 
# Current dir:     /oak/stanford/groups/akundaje/marinovg/genomes
# Date:            Mon Mar 25 12:11:54 2019
# [ok]