#                                                                       --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
# target name        accession  query name                   accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target
#------------------- ----------         -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------
Clp_N	PF02861.15	gi|15920164|ref|NP_375833.1|	-	0.066	13.1	0.2	9.9	6.1	0.0	2.8	3	0	0	3	3	3	0	Clp	amino	terminal	domain
PIN	PF01850.16	gi|15920165|ref|NP_375834.1|	-	3e-08	33.9	0.1	3.9e-08	33.6	0.1	1.2	1	0	0	1	1	1	1	PIN	domain
Mt_ATP-synt_B	PF05405.9	gi|15920167|ref|NP_375836.1|	-	0.016	14.6	1.7	0.017	14.5	1.2	1.0	1	0	0	1	1	1	0	Mitochondrial	ATP	synthase	B	chain	precursor	(ATP-synt_B)
GnsAB	PF08178.6	gi|15920167|ref|NP_375836.1|	-	0.13	11.9	7.5	0.52	10.0	5.2	1.9	1	1	0	1	1	1	0	GnsA/GnsB	family
DUF2535	PF10751.4	gi|15920167|ref|NP_375836.1|	-	0.18	11.9	2.4	0.27	11.3	1.7	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2535)
Histone_HNS	PF00816.16	gi|15920167|ref|NP_375836.1|	-	0.2	12.2	2.5	0.43	11.1	1.7	1.6	1	1	0	1	1	1	0	H-NS	histone	family
NTP_transf_2	PF01909.18	gi|15920168|ref|NP_375837.1|	-	2.3e-05	24.6	0.7	2.4e-05	24.5	0.5	1.0	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
HEPN	PF05168.9	gi|15920170|ref|NP_375839.1|	-	4.1e-06	26.6	0.7	4.3e-06	26.6	0.5	1.0	1	0	0	1	1	1	1	HEPN	domain
OEP	PF02321.13	gi|15920170|ref|NP_375839.1|	-	0.077	12.5	0.4	0.076	12.5	0.3	1.1	1	0	0	1	1	1	0	Outer	membrane	efflux	protein
Peptidase_S9	PF00326.16	gi|15920171|ref|NP_375840.1|	-	2.9e-45	154.1	0.0	4.2e-45	153.5	0.0	1.2	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
Abhydrolase_6	PF12697.2	gi|15920171|ref|NP_375840.1|	-	0.00036	20.4	0.0	0.00074	19.4	0.0	1.5	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Peptidase_S9_N	PF02897.10	gi|15920171|ref|NP_375840.1|	-	0.053	12.0	0.0	0.087	11.3	0.0	1.3	1	0	0	1	1	1	0	Prolyl	oligopeptidase,	N-terminal	beta-propeller	domain
Peptidase_S28	PF05577.7	gi|15920171|ref|NP_375840.1|	-	0.15	10.6	0.0	0.23	10.0	0.0	1.1	1	0	0	1	1	1	0	Serine	carboxypeptidase	S28
DEAD	PF00270.24	gi|15920172|ref|NP_375841.1|	-	8.5e-20	70.9	0.2	2e-19	69.7	0.1	1.6	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|15920172|ref|NP_375841.1|	-	3.8e-13	49.0	0.8	1.4e-12	47.2	0.3	2.2	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|15920172|ref|NP_375841.1|	-	6.3e-07	29.4	0.2	1.1e-06	28.6	0.1	1.4	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
PhoH	PF02562.11	gi|15920172|ref|NP_375841.1|	-	0.014	14.6	0.1	0.039	13.1	0.0	1.7	1	0	0	1	1	1	0	PhoH-like	protein
SecA_DEAD	PF07517.9	gi|15920172|ref|NP_375841.1|	-	0.11	11.8	0.1	0.21	10.8	0.1	1.4	1	0	0	1	1	1	0	SecA	DEAD-like	domain
zf-C2H2	PF00096.21	gi|15920174|ref|NP_375843.1|	-	0.00055	20.1	3.1	0.15	12.4	0.3	2.4	2	0	0	2	2	2	2	Zinc	finger,	C2H2	type
zf-C2H2_4	PF13894.1	gi|15920174|ref|NP_375843.1|	-	0.00091	19.3	1.4	0.95	9.9	0.3	2.3	2	0	0	2	2	2	2	C2H2-type	zinc	finger
Rad50_zn_hook	PF04423.9	gi|15920174|ref|NP_375843.1|	-	0.027	13.9	1.6	0.087	12.3	0.2	2.1	1	1	1	2	2	2	0	Rad50	zinc	hook	motif
Zn-ribbon_8	PF09723.5	gi|15920174|ref|NP_375843.1|	-	0.057	13.3	2.3	0.36	10.8	1.6	2.1	1	1	0	1	1	1	0	Zinc	ribbon	domain
zf-C2H2_2	PF12756.2	gi|15920174|ref|NP_375843.1|	-	0.46	10.6	3.8	3.6	7.7	0.1	2.2	1	1	1	2	2	2	0	C2H2	type	zinc-finger	(2	copies)
Rubredoxin	PF00301.15	gi|15920174|ref|NP_375843.1|	-	0.58	10.0	2.7	22	5.0	0.0	2.8	3	0	0	3	3	3	0	Rubredoxin
BIR	PF00653.16	gi|15920174|ref|NP_375843.1|	-	0.6	10.5	2.3	17	5.8	0.1	2.2	1	1	1	2	2	2	0	Inhibitor	of	Apoptosis	domain
zf-H2C2_2	PF13465.1	gi|15920174|ref|NP_375843.1|	-	7.1	7.1	9.3	0.89	9.9	0.6	3.1	2	1	1	3	3	3	0	Zinc-finger	double	domain
DUF2276	PF10040.4	gi|15920175|ref|NP_375844.1|	-	2.8e-07	30.7	0.1	6.6e-07	29.5	0.1	1.6	1	1	1	2	2	2	1	Uncharacterized	conserved	protein	(DUF2276)
Phage_XkdX	PF09693.5	gi|15920175|ref|NP_375844.1|	-	0.11	12.0	0.0	0.21	11.1	0.0	1.4	1	0	0	1	1	1	0	Phage	uncharacterised	protein	(Phage_XkdX)
DUF2247	PF10004.4	gi|15920177|ref|NP_375846.1|	-	5.2e-05	23.0	0.2	6.7e-05	22.6	0.1	1.3	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2247)
RAMPs	PF03787.10	gi|15920178|ref|NP_375847.1|	-	3e-21	76.2	0.0	6.3e-21	75.1	0.0	1.5	1	1	0	1	1	1	1	RAMP	superfamily
RAMPs	PF03787.10	gi|15920179|ref|NP_375848.1|	-	8.2e-25	87.9	0.1	1.8e-24	86.7	0.0	1.6	1	1	0	1	1	1	1	RAMP	superfamily
RAMPs	PF03787.10	gi|15920181|ref|NP_375850.1|	-	1.2e-10	41.6	0.0	1.7e-10	41.1	0.0	1.3	1	1	0	1	1	1	1	RAMP	superfamily
HD	PF01966.17	gi|15920182|ref|NP_375851.1|	-	4e-08	33.3	4.4	6.3e-08	32.6	0.3	2.9	2	1	0	2	2	2	1	HD	domain
DUF3692	PF12469.3	gi|15920182|ref|NP_375851.1|	-	0.012	15.8	0.7	0.14	12.4	0.0	3.2	4	0	0	4	4	4	0	CRISPR-associated	protein
DUF970	PF06153.6	gi|15920182|ref|NP_375851.1|	-	0.044	13.7	0.0	0.25	11.3	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF970)
TF_Zn_Ribbon	PF08271.7	gi|15920182|ref|NP_375851.1|	-	0.11	11.8	1.8	0.24	10.7	1.2	1.6	1	0	0	1	1	1	0	TFIIB	zinc-binding
MutS_III	PF05192.13	gi|15920182|ref|NP_375851.1|	-	0.6	9.8	4.7	3.8	7.2	0.8	2.9	2	1	0	2	2	2	0	MutS	domain	III
RAMPs	PF03787.10	gi|15920183|ref|NP_375852.1|	-	9.8e-11	41.8	0.0	3.2e-10	40.2	0.0	1.7	1	1	0	1	1	1	1	RAMP	superfamily
Cas_Cmr3	PF09700.5	gi|15920183|ref|NP_375852.1|	-	0.0048	16.3	0.0	0.073	12.4	0.0	2.0	2	0	0	2	2	2	1	CRISPR-associated	protein	(Cas_Cmr3)
RAMPs	PF03787.10	gi|15920185|ref|NP_375854.1|	-	1.7e-14	54.2	1.4	2.6e-14	53.5	0.9	1.4	1	1	0	1	1	1	1	RAMP	superfamily
Cas_Cmr3	PF09700.5	gi|15920185|ref|NP_375854.1|	-	0.00052	19.5	0.0	0.00056	19.4	0.0	1.1	1	0	0	1	1	1	1	CRISPR-associated	protein	(Cas_Cmr3)
PaREP1	PF05942.6	gi|15920186|ref|NP_375855.1|	-	1.5e-23	82.8	0.4	2.2e-23	82.2	0.3	1.3	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
HEPN	PF05168.9	gi|15920186|ref|NP_375855.1|	-	0.022	14.6	0.5	2.4	8.0	0.3	2.2	1	1	0	1	1	1	0	HEPN	domain
Antitoxin-MazE	PF04014.13	gi|15920187|ref|NP_375856.1|	-	6.2e-12	44.9	3.5	9.3e-12	44.4	2.4	1.3	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
DUF104	PF01954.11	gi|15920187|ref|NP_375856.1|	-	0.0022	17.9	0.7	0.0044	17.0	0.5	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF104
Sipho_tail	PF05709.6	gi|15920187|ref|NP_375856.1|	-	0.024	13.7	0.2	0.03	13.4	0.1	1.1	1	0	0	1	1	1	0	Phage	tail	protein
AbrB-like	PF14250.1	gi|15920187|ref|NP_375856.1|	-	0.051	13.4	0.2	0.074	12.9	0.1	1.2	1	0	0	1	1	1	0	AbrB-like	transcriptional	regulator
CDC48_N	PF02359.13	gi|15920187|ref|NP_375856.1|	-	0.12	12.3	0.3	0.17	11.8	0.2	1.3	1	0	0	1	1	1	0	Cell	division	protein	48	(CDC48),	N-terminal	domain
DUF1905	PF08922.6	gi|15920187|ref|NP_375856.1|	-	0.12	11.9	0.2	0.18	11.4	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1905)
DUF2118	PF09891.4	gi|15920187|ref|NP_375856.1|	-	0.29	10.8	1.7	0.21	11.3	0.3	1.4	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2118)
PIN	PF01850.16	gi|15920188|ref|NP_375857.1|	-	2.1e-08	34.5	0.1	2.4e-08	34.3	0.0	1.1	1	0	0	1	1	1	1	PIN	domain
SinI	PF08671.5	gi|15920188|ref|NP_375857.1|	-	0.73	9.3	3.5	20	4.7	0.1	3.0	4	0	0	4	4	4	0	Anti-repressor	SinI
Cas_DxTHG	PF09455.5	gi|15920190|ref|NP_375859.1|	-	7.6e-79	265.6	9.2	9.8e-79	265.2	6.4	1.1	1	0	0	1	1	1	1	CRISPR-associated	(Cas)	DxTHG	family
Cas_Cas02710	PF09670.5	gi|15920190|ref|NP_375859.1|	-	0.029	13.0	0.2	0.12	10.9	0.0	2.0	1	1	1	2	2	2	0	CRISPR-associated	protein	(Cas_Cas02710)
UPF0118	PF01594.11	gi|15920190|ref|NP_375859.1|	-	0.087	11.8	0.3	2.3	7.1	0.0	2.7	2	1	1	3	3	3	0	Domain	of	unknown	function	DUF20
BON	PF04972.12	gi|15920191|ref|NP_375860.1|	-	0.052	13.3	1.9	0.075	12.8	0.1	2.1	2	0	0	2	2	2	0	BON	domain
DUF410	PF04190.8	gi|15920192|ref|NP_375861.1|	-	0.026	14.0	2.2	0.033	13.7	1.6	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF410)
Abi	PF02517.11	gi|15920192|ref|NP_375861.1|	-	0.87	9.7	4.1	3.3	7.9	2.9	1.9	1	1	0	1	1	1	0	CAAX	protease	self-immunity
Cas_Cas4	PF01930.12	gi|15920194|ref|NP_375863.1|	-	4.1e-25	88.5	0.5	4.7e-25	88.3	0.4	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF83
PDDEXK_1	PF12705.2	gi|15920194|ref|NP_375863.1|	-	2e-07	30.6	0.2	2.3e-07	30.4	0.2	1.1	1	0	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
S_locus_glycop	PF00954.15	gi|15920194|ref|NP_375863.1|	-	0.027	14.7	0.0	0.13	12.5	0.0	1.9	2	0	0	2	2	2	0	S-locus	glycoprotein	family
TEX12	PF15219.1	gi|15920194|ref|NP_375863.1|	-	0.18	11.8	0.3	1.7	8.6	0.0	2.1	2	0	0	2	2	2	0	Testis-expressed	12
Cas_NE0113	PF09623.5	gi|15920195|ref|NP_375864.1|	-	0.00078	18.9	0.2	0.059	12.8	0.2	2.4	1	1	0	1	1	1	1	CRISPR-associated	protein	NE0113	(Cas_NE0113)
Cas_Cas02710	PF09670.5	gi|15920195|ref|NP_375864.1|	-	0.037	12.6	0.0	0.054	12.1	0.0	1.2	1	0	0	1	1	1	0	CRISPR-associated	protein	(Cas_Cas02710)
DUF440	PF04269.7	gi|15920195|ref|NP_375864.1|	-	0.069	13.1	0.0	0.14	12.2	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF440
PTS_EIIC	PF02378.13	gi|15920196|ref|NP_375865.1|	-	0.7	8.6	5.9	0.37	9.5	0.3	2.2	1	1	1	2	2	2	0	Phosphotransferase	system,	EIIC
CRISPR_Cas2	PF09827.4	gi|15920198|ref|NP_375867.1|	-	1.3e-18	66.8	0.2	1.6e-18	66.5	0.1	1.2	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas2
Cas_Cas1	PF01867.11	gi|15920199|ref|NP_375868.1|	-	1.4e-57	194.9	0.0	1.7e-57	194.6	0.0	1.0	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas1
Orn_Arg_deC_N	PF02784.11	gi|15920199|ref|NP_375868.1|	-	0.1	11.7	0.0	0.16	11.1	0.0	1.4	1	1	0	1	1	1	0	Pyridoxal-dependent	decarboxylase,	pyridoxal	binding	domain
DUF911	PF06023.7	gi|15920200|ref|NP_375869.1|	-	1.9e-113	378.4	0.0	2.2e-113	378.2	0.0	1.0	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF911)
Cas_Csa5	PF09702.5	gi|15920201|ref|NP_375870.1|	-	1.5e-06	28.2	0.1	0.0002	21.4	0.0	2.2	1	1	0	1	1	1	1	CRISPR-associated	protein	(Cas_Csa5)
Phage_int_SAM_4	PF13495.1	gi|15920201|ref|NP_375870.1|	-	0.032	14.5	0.0	7.6	6.9	0.0	2.2	2	0	0	2	2	2	0	Phage	integrase,	N-terminal	SAM-like	domain
DevR	PF01905.11	gi|15920202|ref|NP_375871.1|	-	3.8e-82	275.1	0.4	4.5e-82	274.9	0.3	1.0	1	0	0	1	1	1	1	CRISPR-associated	negative	auto-regulator	DevR/Csa2
Cas_Cas5d	PF09704.5	gi|15920203|ref|NP_375872.1|	-	2.7e-21	76.2	0.0	2.9e-21	76.1	0.0	1.1	1	0	0	1	1	1	1	CRISPR-associated	protein	(Cas_Cas5)
RAMPs	PF03787.10	gi|15920203|ref|NP_375872.1|	-	0.037	13.8	0.0	0.045	13.6	0.0	1.2	1	0	0	1	1	1	0	RAMP	superfamily
ATP13	PF12921.2	gi|15920203|ref|NP_375872.1|	-	0.093	12.0	0.1	0.28	10.5	0.0	1.8	2	0	0	2	2	2	0	Mitochondrial	ATPase	expression
DEAD	PF00270.24	gi|15920205|ref|NP_375874.1|	-	1.1e-10	41.2	0.0	1.3e-08	34.4	0.0	2.4	2	0	0	2	2	2	2	DEAD/DEAH	box	helicase
ResIII	PF04851.10	gi|15920205|ref|NP_375874.1|	-	0.00047	20.0	0.0	0.0032	17.3	0.0	2.4	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.26	gi|15920205|ref|NP_375874.1|	-	0.0031	17.3	0.0	0.0097	15.7	0.0	1.9	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
Band_7	PF01145.20	gi|15920206|ref|NP_375875.1|	-	0.0019	18.1	0.0	0.0026	17.6	0.0	1.2	1	0	0	1	1	1	1	SPFH	domain	/	Band	7	family
HD	PF01966.17	gi|15920206|ref|NP_375875.1|	-	0.0026	17.7	0.4	0.0041	17.1	0.3	1.7	1	1	0	1	1	1	1	HD	domain
Beta_protein	PF14350.1	gi|15920206|ref|NP_375875.1|	-	0.033	13.3	0.1	0.041	13.0	0.1	1.2	1	0	0	1	1	1	0	Beta	protein
DUF2276	PF10040.4	gi|15920207|ref|NP_375876.1|	-	8.4e-26	90.5	0.1	3.7e-25	88.4	0.0	1.9	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2276)
Cas_Cas6	PF01881.11	gi|15920207|ref|NP_375876.1|	-	0.073	13.3	0.7	0.43	10.7	0.2	2.2	2	1	0	2	2	2	0	CRISPR	associated	protein	Cas6
Abhydrolase_3	PF07859.8	gi|15920208|ref|NP_375877.1|	-	0.0043	16.6	0.0	0.01	15.4	0.0	1.5	2	0	0	2	2	2	1	alpha/beta	hydrolase	fold
PIN	PF01850.16	gi|15920209|ref|NP_375878.1|	-	2e-15	57.1	0.1	2.4e-15	56.9	0.1	1.0	1	0	0	1	1	1	1	PIN	domain
DUF2790	PF10976.3	gi|15920209|ref|NP_375878.1|	-	0.067	12.9	0.0	0.094	12.5	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2790)
FliG_M	PF14841.1	gi|15920209|ref|NP_375878.1|	-	0.13	12.2	0.0	0.53	10.3	0.0	1.8	2	0	0	2	2	2	0	FliG	middle	domain
Antitoxin-MazE	PF04014.13	gi|15920210|ref|NP_375879.1|	-	5.1e-11	42.0	3.7	5.1e-11	42.0	2.5	1.7	2	0	0	2	2	2	1	Antidote-toxin	recognition	MazE
MraZ	PF02381.13	gi|15920210|ref|NP_375879.1|	-	0.0014	18.3	0.0	0.0023	17.6	0.0	1.5	1	1	0	1	1	1	1	MraZ	protein
DUF104	PF01954.11	gi|15920210|ref|NP_375879.1|	-	0.0029	17.6	8.2	0.014	15.4	5.7	1.9	1	1	0	1	1	1	1	Protein	of	unknown	function	DUF104
AbrB-like	PF14250.1	gi|15920210|ref|NP_375879.1|	-	0.0054	16.5	0.1	0.0077	16.1	0.0	1.2	1	0	0	1	1	1	1	AbrB-like	transcriptional	regulator
WG_beta_rep	PF14903.1	gi|15920210|ref|NP_375879.1|	-	0.027	14.6	1.3	0.61	10.4	0.2	2.8	1	1	1	2	2	2	0	WG	containing	repeat
CTP-dep_RFKase	PF01982.11	gi|15920210|ref|NP_375879.1|	-	0.034	13.7	0.3	0.099	12.2	0.1	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF120
UFD1	PF03152.9	gi|15920210|ref|NP_375879.1|	-	0.045	12.8	0.0	0.048	12.7	0.0	1.1	1	0	0	1	1	1	0	Ubiquitin	fusion	degradation	protein	UFD1
DUF3553	PF12073.3	gi|15920210|ref|NP_375879.1|	-	0.051	12.8	0.9	0.12	11.7	0.3	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3553)
Agenet	PF05641.7	gi|15920210|ref|NP_375879.1|	-	0.29	11.3	1.7	4.2	7.5	0.1	2.1	1	1	1	2	2	2	0	Agenet	domain
NTP_transf_2	PF01909.18	gi|15920211|ref|NP_375880.1|	-	2.3e-12	47.0	0.8	2.3e-12	47.0	0.5	1.6	2	0	0	2	2	2	1	Nucleotidyltransferase	domain
DUF294	PF03445.8	gi|15920211|ref|NP_375880.1|	-	0.00061	19.4	0.0	0.0021	17.6	0.0	1.8	2	0	0	2	2	2	1	Putative	nucleotidyltransferase	DUF294
DNA_pol_B_palm	PF14792.1	gi|15920211|ref|NP_375880.1|	-	0.033	14.2	0.0	0.055	13.5	0.0	1.4	1	0	0	1	1	1	0	DNA	polymerase	beta	palm
HEPN	PF05168.9	gi|15920213|ref|NP_375882.1|	-	1.2e-12	47.7	0.8	1.3e-12	47.6	0.5	1.0	1	0	0	1	1	1	1	HEPN	domain
DUF4398	PF14346.1	gi|15920213|ref|NP_375882.1|	-	0.07	13.1	0.4	0.087	12.8	0.3	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4398)
NTP_transf_2	PF01909.18	gi|15920214|ref|NP_375883.1|	-	1.1e-06	28.8	2.0	1.5e-06	28.3	1.4	1.2	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
ADH_zinc_N	PF00107.21	gi|15920215|ref|NP_375884.1|	-	1.3e-24	86.2	0.3	2e-24	85.6	0.2	1.3	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_N	PF08240.7	gi|15920215|ref|NP_375884.1|	-	7.1e-23	80.4	0.0	1.3e-22	79.6	0.0	1.4	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N_2	PF13602.1	gi|15920215|ref|NP_375884.1|	-	6.3e-11	43.2	0.1	1.1e-10	42.4	0.1	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
Methyltransf_31	PF13847.1	gi|15920215|ref|NP_375884.1|	-	0.0035	16.9	0.1	0.0064	16.0	0.1	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
TrkA_N	PF02254.13	gi|15920215|ref|NP_375884.1|	-	0.0037	17.2	1.6	0.0071	16.3	1.1	1.5	1	0	0	1	1	1	1	TrkA-N	domain
ThiF	PF00899.16	gi|15920215|ref|NP_375884.1|	-	0.0089	15.8	0.1	0.016	15.0	0.1	1.4	1	0	0	1	1	1	1	ThiF	family
Methyltransf_18	PF12847.2	gi|15920215|ref|NP_375884.1|	-	0.022	15.3	0.1	0.044	14.3	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
UPF0146	PF03686.8	gi|15920215|ref|NP_375884.1|	-	0.091	12.5	0.4	0.24	11.2	0.3	1.7	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0146)
Methyltransf_12	PF08242.7	gi|15920215|ref|NP_375884.1|	-	0.091	13.2	0.0	0.17	12.3	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
zf-DHHC	PF01529.15	gi|15920215|ref|NP_375884.1|	-	2.1	7.7	3.7	3.6	6.9	2.6	1.3	1	0	0	1	1	1	0	DHHC	palmitoyltransferase
ADH_N	PF08240.7	gi|15920216|ref|NP_375885.1|	-	0.00054	19.6	0.0	0.00073	19.2	0.0	1.2	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
DUF59	PF01883.14	gi|15920217|ref|NP_375886.1|	-	3.7e-08	33.2	0.0	7.1e-08	32.3	0.0	1.5	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF59
OrfB_IS605	PF01385.14	gi|15920218|ref|NP_375887.1|	-	4.6e-57	193.0	6.9	6.1e-57	192.6	4.8	1.1	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.6	gi|15920218|ref|NP_375887.1|	-	3.8e-19	68.1	0.0	7.2e-19	67.2	0.0	1.5	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
UPF0081	PF03652.10	gi|15920218|ref|NP_375887.1|	-	3.4e-06	27.2	0.0	5.7e-06	26.4	0.0	1.3	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0081)
OrfB_IS605	PF01385.14	gi|15920219|ref|NP_375888.1|	-	2.8e-12	46.5	0.5	4.4e-12	45.8	0.4	1.3	1	0	0	1	1	1	1	Probable	transposase
Y1_Tnp	PF01797.11	gi|15920220|ref|NP_375889.1|	-	2.3e-43	146.9	0.0	2.6e-43	146.7	0.0	1.0	1	0	0	1	1	1	1	Transposase	IS200	like
GAD	PF02938.9	gi|15920220|ref|NP_375889.1|	-	0.075	13.1	0.2	4.5	7.4	0.0	2.1	2	0	0	2	2	2	0	GAD	domain
Amidohydro_2	PF04909.9	gi|15920221|ref|NP_375890.1|	-	3.9e-16	59.4	0.1	5.6e-16	58.9	0.1	1.2	1	0	0	1	1	1	1	Amidohydrolase
Ald_Xan_dh_C2	PF02738.13	gi|15920222|ref|NP_375891.1|	-	5.8e-17	61.2	0.1	6.6e-17	61.0	0.0	1.1	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
DDE_Tnp_IS1	PF03400.8	gi|15920223|ref|NP_375892.1|	-	2.5e-11	43.8	1.1	2.5e-11	43.8	0.8	1.6	2	0	0	2	2	2	1	IS1	transposase
DDE_Tnp_IS66	PF03050.9	gi|15920223|ref|NP_375892.1|	-	1.2e-05	24.7	2.2	2e-05	23.9	1.6	1.4	1	1	0	1	1	1	1	Transposase	IS66	family
zf-Mss51	PF13824.1	gi|15920223|ref|NP_375892.1|	-	0.00052	19.8	0.7	0.0012	18.6	0.5	1.6	1	0	0	1	1	1	1	Zinc-finger	of	mitochondrial	splicing	suppressor	51
HTH_17	PF12728.2	gi|15920223|ref|NP_375892.1|	-	0.0021	18.2	0.0	1.3	9.3	0.0	2.7	2	0	0	2	2	2	1	Helix-turn-helix	domain
Zn_Tnp_IS1	PF03811.8	gi|15920223|ref|NP_375892.1|	-	0.0023	17.4	3.1	0.0049	16.3	2.2	1.5	1	0	0	1	1	1	1	InsA	N-terminal	domain
Zn_Tnp_IS1595	PF12760.2	gi|15920223|ref|NP_375892.1|	-	0.0059	16.3	4.8	0.013	15.2	3.3	1.6	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
DUF2387	PF09526.5	gi|15920223|ref|NP_375892.1|	-	0.031	14.1	1.1	0.056	13.3	0.7	1.3	1	0	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
HTH_28	PF13518.1	gi|15920223|ref|NP_375892.1|	-	0.047	13.7	0.3	1.9	8.5	0.0	2.6	2	0	0	2	2	2	0	Helix-turn-helix	domain
Zn-ribbon_8	PF09723.5	gi|15920223|ref|NP_375892.1|	-	0.07	13.1	5.8	2.1	8.3	0.8	2.4	2	0	0	2	2	2	0	Zinc	ribbon	domain
HTH_38	PF13936.1	gi|15920223|ref|NP_375892.1|	-	0.071	12.6	0.2	0.32	10.5	0.1	2.0	2	0	0	2	2	2	0	Helix-turn-helix	domain
zf-met2	PF12907.2	gi|15920223|ref|NP_375892.1|	-	0.079	12.9	1.9	0.13	12.1	0.6	1.9	2	0	0	2	2	2	0	Zinc-binding
DUF1289	PF06945.8	gi|15920223|ref|NP_375892.1|	-	0.086	12.3	0.8	0.17	11.3	0.6	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1289)
DUF2225	PF09986.4	gi|15920223|ref|NP_375892.1|	-	0.094	12.1	5.8	0.014	14.8	1.0	2.0	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2225)
TF_Zn_Ribbon	PF08271.7	gi|15920223|ref|NP_375892.1|	-	0.18	11.1	1.4	2.1	7.7	1.0	2.1	1	1	1	2	2	2	0	TFIIB	zinc-binding
HTH_23	PF13384.1	gi|15920223|ref|NP_375892.1|	-	0.22	11.2	1.1	4.5	7.0	0.0	3.0	3	0	0	3	3	3	0	Homeodomain-like	domain
zinc_ribbon_5	PF13719.1	gi|15920223|ref|NP_375892.1|	-	0.74	9.4	4.4	1.4	8.5	3.1	1.5	1	0	0	1	1	1	0	zinc-ribbon	domain
zf-H2C2_2	PF13465.1	gi|15920223|ref|NP_375892.1|	-	0.79	10.1	9.3	0.11	12.8	1.2	2.7	2	0	0	2	2	2	0	Zinc-finger	double	domain
zinc_ribbon_4	PF13717.1	gi|15920223|ref|NP_375892.1|	-	1.3	8.8	4.1	2.5	7.8	2.9	1.5	1	0	0	1	1	1	0	zinc-ribbon	domain
Ald_Xan_dh_C2	PF02738.13	gi|15920224|ref|NP_375893.1|	-	1.7e-63	214.8	0.0	2.2e-63	214.4	0.0	1.0	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|15920224|ref|NP_375893.1|	-	1.4e-25	89.4	0.0	2.4e-25	88.7	0.0	1.4	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
SpoIIIAH	PF12685.2	gi|15920224|ref|NP_375893.1|	-	0.17	11.3	2.0	0.34	10.3	1.4	1.5	1	0	0	1	1	1	0	SpoIIIAH-like	protein
ECH	PF00378.15	gi|15920225|ref|NP_375894.1|	-	4.5e-62	209.3	0.0	5.2e-62	209.1	0.0	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
ECH_C	PF13766.1	gi|15920225|ref|NP_375894.1|	-	0.0041	17.2	0.0	0.0088	16.1	0.0	1.5	1	0	0	1	1	1	1	2-enoyl-CoA	Hydratase	C-terminal	region
AMP-binding	PF00501.23	gi|15920227|ref|NP_375896.1|	-	1.9e-86	290.1	0.0	2.4e-86	289.7	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|15920227|ref|NP_375896.1|	-	2.2e-20	73.3	0.6	4.4e-20	72.3	0.4	1.6	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
HTH_10	PF04967.7	gi|15920228|ref|NP_375897.1|	-	2.3e-21	75.1	0.1	5.8e-21	73.8	0.0	1.7	1	0	0	1	1	1	1	HTH	DNA	binding	domain
HTH_24	PF13412.1	gi|15920228|ref|NP_375897.1|	-	4.6e-05	22.7	2.6	0.00064	19.0	0.2	3.6	3	1	0	3	3	3	1	Winged	helix-turn-helix	DNA-binding
MerR	PF00376.18	gi|15920228|ref|NP_375897.1|	-	0.0015	18.0	0.0	0.0048	16.4	0.0	1.9	2	0	0	2	2	2	1	MerR	family	regulatory	protein
HTH_5	PF01022.15	gi|15920228|ref|NP_375897.1|	-	0.0049	16.4	0.0	0.021	14.5	0.0	2.0	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_17	PF12728.2	gi|15920228|ref|NP_375897.1|	-	0.017	15.3	0.2	0.047	13.9	0.0	1.8	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_Mga	PF08280.6	gi|15920228|ref|NP_375897.1|	-	0.028	14.1	0.0	0.091	12.5	0.0	1.9	1	0	0	1	1	1	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_26	PF13443.1	gi|15920228|ref|NP_375897.1|	-	0.04	14.1	0.1	0.43	10.8	0.0	2.5	2	0	0	2	2	2	0	Cro/C1-type	HTH	DNA-binding	domain
Phage_CI_repr	PF07022.8	gi|15920228|ref|NP_375897.1|	-	0.063	13.3	0.0	0.14	12.3	0.0	1.5	1	0	0	1	1	1	0	Bacteriophage	CI	repressor	helix-turn-helix	domain
DUF976	PF06162.7	gi|15920228|ref|NP_375897.1|	-	0.069	12.6	0.3	0.16	11.4	0.0	1.7	2	0	0	2	2	2	0	Caenorhabditis	elegans	protein	of	unknown	function	(DUF976)
MerR_1	PF13411.1	gi|15920228|ref|NP_375897.1|	-	0.083	12.6	1.9	0.21	11.4	0.0	2.5	3	0	0	3	3	3	0	MerR	HTH	family	regulatory	protein
HTH_18	PF12833.2	gi|15920228|ref|NP_375897.1|	-	0.094	12.8	0.0	1.5	9.0	0.0	2.3	2	0	0	2	2	2	0	Helix-turn-helix	domain
UbiD	PF01977.11	gi|15920229|ref|NP_375898.1|	-	3.3e-114	381.5	0.0	3.8e-114	381.3	0.0	1.0	1	0	0	1	1	1	1	3-octaprenyl-4-hydroxybenzoate	carboxy-lyase
ADH_N	PF08240.7	gi|15920230|ref|NP_375899.1|	-	5.4e-32	109.7	1.0	6.7e-32	109.4	0.2	1.5	2	0	0	2	2	2	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|15920230|ref|NP_375899.1|	-	3.6e-25	88.0	0.0	6.8e-25	87.1	0.0	1.5	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|15920230|ref|NP_375899.1|	-	5.3e-17	62.8	0.0	8.9e-17	62.1	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
Methyltransf_18	PF12847.2	gi|15920230|ref|NP_375899.1|	-	0.0028	18.2	0.0	0.0051	17.3	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
DapB_N	PF01113.15	gi|15920230|ref|NP_375899.1|	-	0.072	13.0	0.1	0.19	11.6	0.0	1.7	1	0	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
Sugar_tr	PF00083.19	gi|15920231|ref|NP_375900.1|	-	8.1e-21	74.1	34.8	1.3e-13	50.3	7.7	2.3	1	1	1	2	2	2	2	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|15920231|ref|NP_375900.1|	-	9e-21	73.9	44.5	9e-21	73.9	30.9	2.2	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
MFS_1_like	PF12832.2	gi|15920231|ref|NP_375900.1|	-	0.012	15.4	0.7	0.012	15.4	0.5	3.1	3	1	0	3	3	3	0	MFS_1	like	family
Transgly_assoc	PF04226.8	gi|15920231|ref|NP_375900.1|	-	0.028	14.4	3.7	0.028	14.4	2.5	5.1	4	1	0	4	4	4	0	Transglycosylase	associated	protein
Scs3p	PF10261.4	gi|15920231|ref|NP_375900.1|	-	0.056	12.4	0.6	0.28	10.2	0.4	2.2	1	1	0	1	1	1	0	Inositol	phospholipid	synthesis	and	fat-storage-inducing	TM
TMEM51	PF15345.1	gi|15920231|ref|NP_375900.1|	-	0.18	11.4	0.1	4.1	7.0	0.0	2.2	2	0	0	2	2	2	0	Transmembrane	protein	51
DUF3842	PF12953.2	gi|15920231|ref|NP_375900.1|	-	0.46	10.6	6.8	0.34	11.0	2.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3842)
UPF0233	PF06781.7	gi|15920231|ref|NP_375900.1|	-	0.72	9.5	6.6	1.8	8.2	0.0	3.2	3	0	0	3	3	3	0	Uncharacterised	protein	family	(UPF0233)
DDE_Tnp_1	PF01609.16	gi|15920233|ref|NP_375902.1|	-	5e-13	49.0	0.0	8.3e-13	48.3	0.0	1.4	1	1	0	1	1	1	1	Transposase	DDE	domain
B12-binding	PF02310.14	gi|15920235|ref|NP_375904.1|	-	3.4e-21	75.3	0.4	2.2e-20	72.7	0.0	2.3	2	1	0	2	2	2	1	B12	binding	domain
Radical_SAM	PF04055.16	gi|15920235|ref|NP_375904.1|	-	4e-19	69.4	0.0	1.1e-18	67.9	0.0	1.8	2	0	0	2	2	2	1	Radical	SAM	superfamily
Lactamase_B	PF00753.22	gi|15920236|ref|NP_375905.1|	-	4.3e-26	91.7	0.1	7.1e-26	91.0	0.1	1.4	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|15920236|ref|NP_375905.1|	-	0.00017	21.1	0.1	0.0002	20.9	0.1	1.4	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
THOC7	PF05615.8	gi|15920236|ref|NP_375905.1|	-	0.083	13.1	0.0	0.18	12.0	0.0	1.5	1	0	0	1	1	1	0	Tho	complex	subunit	7
Nbl1_Borealin_N	PF10444.4	gi|15920236|ref|NP_375905.1|	-	0.83	9.0	3.5	0.8	9.1	1.3	1.8	2	0	0	2	2	2	0	Nbl1	/	Borealin	N	terminal
DUF1434	PF07254.7	gi|15920237|ref|NP_375906.1|	-	0.085	12.6	0.5	0.11	12.2	0.4	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1434)
SBP56	PF05694.6	gi|15920238|ref|NP_375907.1|	-	1.7e-209	696.0	0.0	1.9e-209	695.9	0.0	1.0	1	0	0	1	1	1	1	56kDa	selenium	binding	protein	(SBP56)
DUF1264	PF06884.6	gi|15920238|ref|NP_375907.1|	-	0.069	12.5	0.0	0.13	11.7	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1264)
Rad54_N	PF08658.5	gi|15920238|ref|NP_375907.1|	-	0.2	11.3	0.1	0.33	10.6	0.1	1.2	1	0	0	1	1	1	0	Rad54	N	terminal
4HBT	PF03061.17	gi|15920240|ref|NP_375909.1|	-	5.8e-15	55.1	0.0	7.4e-15	54.8	0.0	1.1	1	0	0	1	1	1	1	Thioesterase	superfamily
4HBT_3	PF13622.1	gi|15920240|ref|NP_375909.1|	-	0.00015	21.6	0.0	0.00019	21.2	0.0	1.1	1	0	0	1	1	1	1	Thioesterase-like	superfamily
AMP-binding	PF00501.23	gi|15920241|ref|NP_375910.1|	-	4.1e-88	295.5	0.0	5e-88	295.2	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|15920241|ref|NP_375910.1|	-	6.5e-15	55.8	0.0	1.3e-14	54.9	0.0	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
eIF-1a	PF01176.14	gi|15920241|ref|NP_375910.1|	-	0.22	10.9	2.9	0.36	10.3	0.4	2.3	2	0	0	2	2	2	0	Translation	initiation	factor	1A	/	IF-1
HpaB_N	PF11794.3	gi|15920242|ref|NP_375911.1|	-	3.1e-74	249.6	0.2	4e-74	249.3	0.2	1.1	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
HpaB	PF03241.8	gi|15920242|ref|NP_375911.1|	-	2.4e-42	144.1	0.0	3.2e-42	143.7	0.0	1.2	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	C	terminal
AF0941-like	PF14591.1	gi|15920242|ref|NP_375911.1|	-	0.0054	16.7	0.5	0.016	15.2	0.1	2.0	2	0	0	2	2	2	1	AF0941-like
Aldedh	PF00171.17	gi|15920243|ref|NP_375912.1|	-	1.9e-147	491.3	0.0	2.1e-147	491.1	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
DUF4310	PF14187.1	gi|15920243|ref|NP_375912.1|	-	0.077	12.4	0.2	0.14	11.6	0.1	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4310)
Sugar_tr	PF00083.19	gi|15920244|ref|NP_375913.1|	-	1.6e-46	158.8	28.3	2e-46	158.5	19.6	1.1	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|15920244|ref|NP_375913.1|	-	4.3e-41	140.8	41.4	4.3e-41	140.8	28.7	1.8	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
MFS_2	PF13347.1	gi|15920244|ref|NP_375913.1|	-	9.3e-10	37.4	25.8	7.3e-07	27.9	2.8	2.7	1	1	1	2	2	2	2	MFS/sugar	transport	protein
DUF1228	PF06779.9	gi|15920244|ref|NP_375913.1|	-	0.025	14.5	0.3	0.025	14.5	0.2	3.6	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF1228)
Acyl-CoA_dh_1	PF00441.19	gi|15920245|ref|NP_375914.1|	-	1.3e-27	96.7	0.0	1.8e-27	96.2	0.0	1.2	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|15920245|ref|NP_375914.1|	-	1.4e-16	59.7	0.0	3e-16	58.6	0.0	1.6	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.6	gi|15920245|ref|NP_375914.1|	-	1.7e-10	41.2	0.0	2.8e-10	40.5	0.0	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.11	gi|15920245|ref|NP_375914.1|	-	1.7e-08	34.9	0.0	3.3e-08	34.1	0.0	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
CoA_transf_3	PF02515.12	gi|15920246|ref|NP_375915.1|	-	2e-54	183.7	0.0	2.6e-54	183.3	0.0	1.2	1	0	0	1	1	1	1	CoA-transferase	family	III
SseB	PF07179.7	gi|15920246|ref|NP_375915.1|	-	0.11	12.2	0.0	1.2	8.9	0.0	2.3	2	0	0	2	2	2	0	SseB	protein	N-terminal	domain
MaoC_dehydratas	PF01575.14	gi|15920247|ref|NP_375916.1|	-	2.6e-16	59.1	0.0	3.9e-16	58.5	0.0	1.2	1	0	0	1	1	1	1	MaoC	like	domain
MaoC_dehydrat_N	PF13452.1	gi|15920247|ref|NP_375916.1|	-	0.00013	21.7	0.0	0.00022	21.0	0.0	1.4	1	0	0	1	1	1	1	N-terminal	half	of	MaoC	dehydratase
FabA	PF07977.8	gi|15920247|ref|NP_375916.1|	-	0.0014	18.0	0.0	0.0024	17.3	0.0	1.4	1	1	0	1	1	1	1	FabA-like	domain
4HBT	PF03061.17	gi|15920247|ref|NP_375916.1|	-	0.009	16.1	0.0	0.015	15.4	0.0	1.4	1	0	0	1	1	1	1	Thioesterase	superfamily
ECH	PF00378.15	gi|15920248|ref|NP_375917.1|	-	7.1e-68	228.3	0.0	1.2e-67	227.6	0.0	1.3	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
3HCDH_N	PF02737.13	gi|15920248|ref|NP_375917.1|	-	1.5e-65	220.2	0.4	2.1e-65	219.7	0.3	1.2	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
3HCDH	PF00725.17	gi|15920248|ref|NP_375917.1|	-	9e-44	147.8	0.0	4.4e-25	87.9	0.0	2.8	2	0	0	2	2	2	2	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
NAD_binding_2	PF03446.10	gi|15920248|ref|NP_375917.1|	-	0.0013	18.5	0.0	0.0032	17.3	0.0	1.8	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Pyr_redox	PF00070.22	gi|15920248|ref|NP_375917.1|	-	0.0038	17.5	0.1	0.036	14.4	0.1	2.7	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_Gly3P_dh_N	PF01210.18	gi|15920248|ref|NP_375917.1|	-	0.0065	16.2	0.1	0.015	15.0	0.1	1.7	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
NAD_binding_7	PF13241.1	gi|15920248|ref|NP_375917.1|	-	0.026	14.7	0.0	0.063	13.5	0.0	1.7	1	0	0	1	1	1	0	Putative	NAD(P)-binding
F420_oxidored	PF03807.12	gi|15920248|ref|NP_375917.1|	-	0.072	13.5	0.1	0.24	11.8	0.0	2.0	1	0	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
Peptidase_S49	PF01343.13	gi|15920248|ref|NP_375917.1|	-	0.082	12.6	0.0	0.21	11.3	0.0	1.6	1	0	0	1	1	1	0	Peptidase	family	S49
2-Hacid_dh_C	PF02826.14	gi|15920248|ref|NP_375917.1|	-	0.11	11.6	0.0	0.19	10.8	0.0	1.4	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
ThiF	PF00899.16	gi|15920248|ref|NP_375917.1|	-	0.12	12.1	0.2	0.33	10.7	0.1	1.7	1	0	0	1	1	1	0	ThiF	family
adh_short	PF00106.20	gi|15920249|ref|NP_375918.1|	-	5.3e-29	101.2	0.1	7.3e-29	100.8	0.1	1.2	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|15920249|ref|NP_375918.1|	-	3.2e-26	92.5	0.6	3.9e-26	92.2	0.4	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|15920249|ref|NP_375918.1|	-	1.4e-08	34.5	0.1	2.1e-08	34.0	0.1	1.2	1	0	0	1	1	1	1	KR	domain
PABP	PF00658.13	gi|15920249|ref|NP_375918.1|	-	0.016	14.8	0.0	0.047	13.3	0.0	1.8	2	0	0	2	2	2	0	Poly-adenylate	binding	protein,	unique	domain
MCR_gamma	PF02240.11	gi|15920249|ref|NP_375918.1|	-	0.028	13.5	0.0	0.061	12.4	0.0	1.5	2	0	0	2	2	2	0	Methyl-coenzyme	M	reductase	gamma	subunit
DUF1932	PF09130.6	gi|15920249|ref|NP_375918.1|	-	0.038	13.7	0.0	0.078	12.7	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1932)
F420_oxidored	PF03807.12	gi|15920249|ref|NP_375918.1|	-	0.069	13.5	1.0	0.15	12.5	0.3	1.9	2	0	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
NmrA	PF05368.8	gi|15920249|ref|NP_375918.1|	-	0.13	11.4	0.4	0.26	10.5	0.3	1.5	1	0	0	1	1	1	0	NmrA-like	family
Ribosomal_L5	PF00281.14	gi|15920249|ref|NP_375918.1|	-	0.15	11.8	0.3	2.2	8.1	0.0	2.8	3	0	0	3	3	3	0	Ribosomal	protein	L5
Abhydrolase_3	PF07859.8	gi|15920250|ref|NP_375919.1|	-	3e-69	232.8	0.0	3.6e-69	232.5	0.0	1.0	1	0	0	1	1	1	1	alpha/beta	hydrolase	fold
COesterase	PF00135.23	gi|15920250|ref|NP_375919.1|	-	8.7e-09	34.6	0.2	1.5e-08	33.8	0.2	1.3	1	1	0	1	1	1	1	Carboxylesterase	family
DUF2424	PF10340.4	gi|15920250|ref|NP_375919.1|	-	5.2e-06	25.3	0.0	7e-06	24.9	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2424)
Abhydrolase_5	PF12695.2	gi|15920250|ref|NP_375919.1|	-	1.9e-05	24.4	0.0	2.9e-05	23.8	0.0	1.3	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Peptidase_S9	PF00326.16	gi|15920250|ref|NP_375919.1|	-	0.0021	17.3	0.0	0.0039	16.4	0.0	1.3	1	1	0	1	1	1	1	Prolyl	oligopeptidase	family
Chlorophyllase2	PF12740.2	gi|15920250|ref|NP_375919.1|	-	0.023	13.5	0.0	0.053	12.4	0.0	1.5	1	1	0	1	1	1	0	Chlorophyllase	enzyme
DUF2974	PF11187.3	gi|15920250|ref|NP_375919.1|	-	0.032	13.5	0.0	0.049	13.0	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2974)
AXE1	PF05448.7	gi|15920250|ref|NP_375919.1|	-	0.12	10.8	0.1	7.3	4.9	0.0	2.1	2	0	0	2	2	2	0	Acetyl	xylan	esterase	(AXE1)
Abhydrolase_6	PF12697.2	gi|15920250|ref|NP_375919.1|	-	0.16	11.8	0.0	0.33	10.7	0.0	1.5	1	1	0	1	1	1	0	Alpha/beta	hydrolase	family
TetR_N	PF00440.18	gi|15920251|ref|NP_375920.1|	-	1e-14	53.8	0.0	1.7e-14	53.2	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	tetR	family
Grp1_Fun34_YaaH	PF01184.14	gi|15920252|ref|NP_375921.1|	-	6.4	6.0	21.6	53	3.0	15.0	2.2	1	1	0	1	1	1	0	GPR1/FUN34/yaaH	family
COXG	PF06240.8	gi|15920253|ref|NP_375922.1|	-	2.9e-32	111.2	0.1	3.3e-32	111.0	0.0	1.0	1	0	0	1	1	1	1	Carbon	monoxide	dehydrogenase	subunit	G	(CoxG)
DUF3211	PF11485.3	gi|15920253|ref|NP_375922.1|	-	0.0011	18.9	0.6	0.0014	18.6	0.4	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3211)
ADH_N	PF08240.7	gi|15920254|ref|NP_375923.1|	-	1.6e-23	82.5	2.2	3e-22	78.4	1.5	2.2	1	1	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|15920254|ref|NP_375923.1|	-	1.2e-15	57.2	0.0	9.4e-15	54.3	0.0	2.1	1	1	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|15920254|ref|NP_375923.1|	-	9.8e-12	45.8	0.1	1.9e-11	44.9	0.0	1.5	2	0	0	2	2	2	1	Zinc-binding	dehydrogenase
Shikimate_DH	PF01488.15	gi|15920254|ref|NP_375923.1|	-	0.11	12.6	0.5	0.26	11.3	0.1	1.9	2	0	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
Epimerase	PF01370.16	gi|15920254|ref|NP_375923.1|	-	0.11	11.9	0.1	0.18	11.1	0.1	1.4	1	0	0	1	1	1	0	NAD	dependent	epimerase/dehydratase	family
KR	PF08659.5	gi|15920254|ref|NP_375923.1|	-	0.12	12.0	0.0	0.17	11.5	0.0	1.3	1	0	0	1	1	1	0	KR	domain
RmlD_sub_bind	PF04321.12	gi|15920254|ref|NP_375923.1|	-	0.14	10.9	0.1	2.4	6.9	0.0	2.0	1	1	1	2	2	2	0	RmlD	substrate	binding	domain
Acyl-CoA_dh_1	PF00441.19	gi|15920255|ref|NP_375924.1|	-	3e-44	150.7	2.8	4.5e-44	150.1	1.9	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.11	gi|15920255|ref|NP_375924.1|	-	8.5e-33	113.3	0.8	1.7e-32	112.3	0.1	1.9	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_2	PF08028.6	gi|15920255|ref|NP_375924.1|	-	5.4e-22	78.4	0.7	9.7e-22	77.6	0.5	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|15920255|ref|NP_375924.1|	-	6.6e-20	70.3	0.1	1.2e-19	69.5	0.1	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
HpaB_N	PF11794.3	gi|15920255|ref|NP_375924.1|	-	0.0004	19.8	0.2	0.002	17.5	0.1	2.1	1	1	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
AMP-binding	PF00501.23	gi|15920256|ref|NP_375925.1|	-	6.5e-82	275.1	0.0	7.6e-82	274.9	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|15920256|ref|NP_375925.1|	-	3.9e-14	53.3	0.0	7.7e-14	52.4	0.0	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
Thiolase_N	PF00108.18	gi|15920258|ref|NP_375927.1|	-	1.5e-15	56.8	0.1	2e-12	46.6	0.0	2.3	2	0	0	2	2	2	2	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.13	gi|15920258|ref|NP_375927.1|	-	8.2e-09	34.9	0.1	4.5e-07	29.3	0.0	2.7	2	0	0	2	2	2	1	Thiolase,	C-terminal	domain
ketoacyl-synt	PF00109.21	gi|15920258|ref|NP_375927.1|	-	4.9e-07	29.4	3.9	8.7e-06	25.3	0.8	2.6	1	1	1	2	2	2	2	Beta-ketoacyl	synthase,	N-terminal	domain
ACP_syn_III	PF08545.5	gi|15920258|ref|NP_375927.1|	-	0.00012	21.6	0.2	0.021	14.4	0.0	2.5	2	0	0	2	2	2	2	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
SpoVAD	PF07451.6	gi|15920258|ref|NP_375927.1|	-	0.048	12.1	0.2	0.11	10.9	0.0	1.6	2	0	0	2	2	2	0	Stage	V	sporulation	protein	AD	(SpoVAD)
DUF35_N	PF12172.3	gi|15920259|ref|NP_375928.1|	-	5.4e-12	45.2	0.1	1.1e-11	44.2	0.0	1.5	2	0	0	2	2	2	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF35	PF01796.12	gi|15920259|ref|NP_375928.1|	-	1.8e-11	44.1	0.0	2.6e-11	43.5	0.0	1.3	1	0	0	1	1	1	1	DUF35	OB-fold	domain
Auto_anti-p27	PF06677.7	gi|15920259|ref|NP_375928.1|	-	0.016	14.9	6.6	0.45	10.3	3.6	2.9	2	1	1	3	3	3	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zinc_ribbon_4	PF13717.1	gi|15920259|ref|NP_375928.1|	-	0.59	9.8	2.9	2.2	8.0	0.0	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-C2H2_3	PF13878.1	gi|15920259|ref|NP_375928.1|	-	0.95	9.0	3.0	0.83	9.2	0.7	1.8	1	1	1	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
Molybdopterin	PF00384.17	gi|15920260|ref|NP_375929.1|	-	2.4e-88	296.7	0.0	3.2e-88	296.3	0.0	1.2	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase
Molydop_binding	PF01568.16	gi|15920260|ref|NP_375929.1|	-	9.4e-22	76.9	0.0	1.9e-21	75.9	0.0	1.5	1	0	0	1	1	1	1	Molydopterin	dinucleotide	binding	domain
Molybdop_Fe4S4	PF04879.11	gi|15920260|ref|NP_375929.1|	-	2.7e-18	65.5	0.4	2.7e-18	65.5	0.3	2.3	2	0	0	2	2	1	1	Molybdopterin	oxidoreductase	Fe4S4	domain
NADH-G_4Fe-4S_3	PF10588.4	gi|15920260|ref|NP_375929.1|	-	9.7e-13	47.1	0.4	9.7e-13	47.1	0.3	2.2	2	0	0	2	2	1	1	NADH-ubiquinone	oxidoreductase-G	iron-sulfur	binding	region
Fer2_4	PF13510.1	gi|15920260|ref|NP_375929.1|	-	1.9e-11	43.6	0.0	4.3e-11	42.4	0.0	1.6	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4	PF00037.22	gi|15920260|ref|NP_375929.1|	-	4.4e-11	41.9	19.1	3.7e-06	26.3	2.4	3.6	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|15920260|ref|NP_375929.1|	-	7e-08	32.2	6.0	7e-08	32.2	4.1	3.1	3	0	0	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|15920260|ref|NP_375929.1|	-	8.3e-08	32.5	8.2	8.3e-08	32.5	5.7	3.2	3	0	0	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|15920260|ref|NP_375929.1|	-	4.6e-06	26.8	10.6	4.6e-06	26.8	7.3	3.5	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|15920260|ref|NP_375929.1|	-	5.5e-06	26.3	8.3	5.5e-06	26.3	5.7	2.9	2	1	1	3	3	2	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|15920260|ref|NP_375929.1|	-	6e-06	25.9	11.6	6e-06	25.9	8.0	3.3	1	1	4	5	5	4	3	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|15920260|ref|NP_375929.1|	-	7.5e-06	25.5	12.0	0.00027	20.6	2.1	3.5	4	0	0	4	4	3	2	4Fe-4S	binding	domain
Fer2	PF00111.22	gi|15920260|ref|NP_375929.1|	-	9e-06	25.3	3.8	1.5e-05	24.6	0.1	2.7	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_16	PF13484.1	gi|15920260|ref|NP_375929.1|	-	5.6e-05	23.8	12.9	0.0014	19.2	1.5	3.7	3	1	0	3	3	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.2	gi|15920260|ref|NP_375929.1|	-	7.4e-05	22.4	10.8	0.0014	18.4	1.8	3.5	4	0	0	4	4	2	2	4Fe-4S	binding	domain
TPP_enzyme_M	PF00205.17	gi|15920260|ref|NP_375929.1|	-	0.00013	21.7	0.3	0.37	10.5	0.0	3.7	4	0	0	4	4	4	1	Thiamine	pyrophosphate	enzyme,	central	domain
Fer4_17	PF13534.1	gi|15920260|ref|NP_375929.1|	-	0.0024	18.2	16.4	0.17	12.2	2.5	3.0	2	2	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|15920260|ref|NP_375929.1|	-	0.0024	18.2	1.0	0.0024	18.2	0.7	3.4	3	1	0	3	3	2	1	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|15920260|ref|NP_375929.1|	-	0.0086	16.6	5.6	0.51	10.9	1.0	2.8	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_3	PF12798.2	gi|15920260|ref|NP_375929.1|	-	0.0098	16.3	25.8	0.057	14.0	5.4	3.3	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_13	PF13370.1	gi|15920260|ref|NP_375929.1|	-	0.41	11.0	11.2	4.8	7.6	1.3	2.8	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
DUF1641	PF07849.6	gi|15920261|ref|NP_375930.1|	-	8.1e-13	47.7	0.2	1.7e-12	46.7	0.0	1.6	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1641)
DUF2013	PF09431.5	gi|15920261|ref|NP_375930.1|	-	0.056	13.1	1.1	0.15	11.8	0.2	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2013)
FdhD-NarQ	PF02634.10	gi|15920262|ref|NP_375931.1|	-	4.9e-74	248.7	0.0	5.6e-74	248.5	0.0	1.0	1	0	0	1	1	1	1	FdhD/NarQ	family
Acyl-CoA_dh_1	PF00441.19	gi|15920263|ref|NP_375932.1|	-	8.2e-11	42.2	0.0	1.1e-08	35.2	0.0	2.1	2	0	0	2	2	2	2	Acyl-CoA	dehydrogenase,	C-terminal	domain
MaoC_dehydratas	PF01575.14	gi|15920264|ref|NP_375933.1|	-	1.4e-19	69.6	0.0	1.7e-19	69.4	0.0	1.1	1	0	0	1	1	1	1	MaoC	like	domain
MaoC_dehydrat_N	PF13452.1	gi|15920264|ref|NP_375933.1|	-	7.8e-06	25.7	0.0	1.4e-05	24.8	0.0	1.4	1	1	0	1	1	1	1	N-terminal	half	of	MaoC	dehydratase
DUF3157	PF11355.3	gi|15920264|ref|NP_375933.1|	-	0.046	13.0	0.0	0.055	12.7	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3157)
Acyl-CoA_dh_N	PF02771.11	gi|15920265|ref|NP_375934.1|	-	6.7e-27	94.3	0.0	1.3e-26	93.3	0.0	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|15920265|ref|NP_375934.1|	-	3.3e-18	64.9	0.0	5.5e-18	64.2	0.0	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_1	PF00441.19	gi|15920265|ref|NP_375934.1|	-	2.6e-12	47.0	0.5	1.8e-07	31.3	0.1	2.2	1	1	1	2	2	2	2	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_ox_N	PF14749.1	gi|15920265|ref|NP_375934.1|	-	0.0085	16.3	0.0	0.017	15.4	0.0	1.6	1	0	0	1	1	1	1	Acyl-coenzyme	A	oxidase	N-terminal
EamA	PF00892.15	gi|15920266|ref|NP_375935.1|	-	1.6e-21	76.6	37.7	2.7e-14	53.2	11.4	2.5	2	1	0	2	2	2	2	EamA-like	transporter	family
DrsE	PF02635.10	gi|15920267|ref|NP_375936.1|	-	5.7e-10	39.3	0.0	6.4e-10	39.1	0.0	1.0	1	0	0	1	1	1	1	DsrE/DsrF-like	family
Oxidored_FMN	PF00724.15	gi|15920268|ref|NP_375937.1|	-	4e-66	223.3	0.0	5.2e-66	222.9	0.0	1.1	1	0	0	1	1	1	1	NADH:flavin	oxidoreductase	/	NADH	oxidase	family
NAD_binding_8	PF13450.1	gi|15920268|ref|NP_375937.1|	-	7e-09	35.5	0.0	1.7e-08	34.3	0.0	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox	PF00070.22	gi|15920268|ref|NP_375937.1|	-	4.5e-07	30.1	3.3	4.3e-05	23.8	0.5	3.5	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Dus	PF01207.12	gi|15920268|ref|NP_375937.1|	-	1.9e-05	23.6	0.0	0.00066	18.5	0.0	2.6	2	1	0	2	2	2	1	Dihydrouridine	synthase	(Dus)
DAO	PF01266.19	gi|15920268|ref|NP_375937.1|	-	3.6e-05	22.8	0.2	9e-05	21.5	0.2	1.6	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
3HCDH_N	PF02737.13	gi|15920268|ref|NP_375937.1|	-	0.0001	21.9	0.0	0.00018	21.2	0.0	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Thi4	PF01946.12	gi|15920268|ref|NP_375937.1|	-	0.0014	17.7	0.2	0.0029	16.7	0.1	1.4	1	0	0	1	1	1	1	Thi4	family
Amino_oxidase	PF01593.19	gi|15920268|ref|NP_375937.1|	-	0.0021	17.2	0.0	0.0042	16.2	0.0	1.4	1	0	0	1	1	1	1	Flavin	containing	amine	oxidoreductase
PcrB	PF01884.12	gi|15920268|ref|NP_375937.1|	-	0.003	16.8	2.1	0.032	13.5	0.0	3.1	4	0	0	4	4	4	1	PcrB	family
Pyr_redox_2	PF07992.9	gi|15920268|ref|NP_375937.1|	-	0.0047	16.8	0.0	0.0093	15.8	0.0	1.5	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|15920268|ref|NP_375937.1|	-	0.0049	15.9	0.2	0.0074	15.3	0.2	1.2	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox_3	PF13738.1	gi|15920268|ref|NP_375937.1|	-	0.0052	16.8	0.0	0.01	15.9	0.0	1.5	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|15920268|ref|NP_375937.1|	-	0.046	12.2	0.3	0.12	10.8	0.2	1.6	2	0	0	2	2	2	0	HI0933-like	protein
UDPG_MGDP_dh_N	PF03721.9	gi|15920268|ref|NP_375937.1|	-	0.06	12.7	0.0	0.13	11.5	0.0	1.5	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Trp_syntA	PF00290.15	gi|15920268|ref|NP_375937.1|	-	0.11	11.0	0.0	0.19	10.2	0.0	1.3	1	0	0	1	1	1	0	Tryptophan	synthase	alpha	chain
AlaDh_PNT_C	PF01262.16	gi|15920268|ref|NP_375937.1|	-	0.11	12.0	0.0	0.25	10.9	0.0	1.5	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
NAD_binding_7	PF13241.1	gi|15920268|ref|NP_375937.1|	-	0.13	12.4	0.0	0.27	11.4	0.0	1.6	1	0	0	1	1	1	0	Putative	NAD(P)-binding
GIDA	PF01134.17	gi|15920268|ref|NP_375937.1|	-	0.17	10.7	0.0	0.25	10.1	0.0	1.2	1	0	0	1	1	1	0	Glucose	inhibited	division	protein	A
Sugar_tr	PF00083.19	gi|15920269|ref|NP_375938.1|	-	9.9e-48	162.8	30.7	7.6e-46	156.6	21.3	2.0	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|15920269|ref|NP_375938.1|	-	9.2e-35	119.9	66.4	3e-32	111.7	29.0	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
OATP	PF03137.15	gi|15920269|ref|NP_375938.1|	-	0.00051	18.2	2.7	0.00051	18.2	1.8	2.5	3	0	0	3	3	3	1	Organic	Anion	Transporter	Polypeptide	(OATP)	family
Gp5_OB	PF06714.6	gi|15920269|ref|NP_375938.1|	-	0.21	11.5	0.0	0.42	10.6	0.0	1.4	1	0	0	1	1	1	0	Gp5	N-terminal	OB	domain
PDR_assoc	PF08370.6	gi|15920269|ref|NP_375938.1|	-	0.25	10.8	4.5	3.8	7.0	0.1	2.9	2	0	0	2	2	2	0	Plant	PDR	ABC	transporter	associated
Pyr_redox_2	PF07992.9	gi|15920270|ref|NP_375939.1|	-	6.4e-25	88.2	7.2	6.9e-23	81.5	5.0	4.0	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|15920270|ref|NP_375939.1|	-	8.6e-23	80.5	3.5	4.2e-19	68.7	0.4	2.6	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Reductase_C	PF14759.1	gi|15920270|ref|NP_375939.1|	-	1e-10	41.7	0.0	1.9e-10	40.8	0.0	1.5	1	0	0	1	1	1	1	Reductase	C-terminal
DAO	PF01266.19	gi|15920270|ref|NP_375939.1|	-	1.1e-10	41.0	2.0	0.024	13.5	1.0	3.1	2	1	1	3	3	3	3	FAD	dependent	oxidoreductase
Pyr_redox_3	PF13738.1	gi|15920270|ref|NP_375939.1|	-	1e-09	38.7	0.0	1.4e-07	31.7	0.0	2.2	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|15920270|ref|NP_375939.1|	-	3.6e-05	22.8	3.2	0.27	10.0	0.0	3.2	2	1	1	3	3	3	2	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.9	gi|15920270|ref|NP_375939.1|	-	0.00051	18.6	1.7	0.29	9.5	0.0	3.1	2	1	1	3	3	3	1	HI0933-like	protein
NAD_binding_9	PF13454.1	gi|15920270|ref|NP_375939.1|	-	0.0015	18.3	1.0	5.5	6.7	0.0	3.2	2	1	1	3	3	3	1	FAD-NAD(P)-binding
NAD_binding_7	PF13241.1	gi|15920270|ref|NP_375939.1|	-	0.05	13.8	0.1	0.12	12.6	0.1	1.6	1	0	0	1	1	1	0	Putative	NAD(P)-binding
FAD_binding_3	PF01494.14	gi|15920270|ref|NP_375939.1|	-	0.058	12.4	0.2	0.1	11.5	0.1	1.3	1	0	0	1	1	1	0	FAD	binding	domain
2-Hacid_dh_C	PF02826.14	gi|15920270|ref|NP_375939.1|	-	0.12	11.5	0.0	0.21	10.7	0.0	1.3	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_8	PF13450.1	gi|15920270|ref|NP_375939.1|	-	0.12	12.4	0.1	0.86	9.6	0.0	2.2	2	0	0	2	2	2	0	NAD(P)-binding	Rossmann-like	domain
Ald_Xan_dh_C2	PF02738.13	gi|15920271|ref|NP_375940.1|	-	2.9e-103	346.0	0.0	4e-103	345.6	0.0	1.0	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|15920271|ref|NP_375940.1|	-	3.3e-16	59.3	0.0	6.7e-16	58.3	0.0	1.5	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
CamS	PF07537.6	gi|15920271|ref|NP_375940.1|	-	0.012	14.6	0.2	0.027	13.4	0.0	1.6	2	0	0	2	2	2	0	CamS	sex	pheromone	cAM373	precursor
FAD_binding_5	PF00941.16	gi|15920272|ref|NP_375941.1|	-	1.5e-45	154.6	0.0	2.5e-45	153.9	0.0	1.4	1	0	0	1	1	1	1	FAD	binding	domain	in	molybdopterin	dehydrogenase
Fer2_2	PF01799.15	gi|15920272|ref|NP_375941.1|	-	4.3e-20	71.3	0.0	9.3e-20	70.3	0.0	1.5	1	0	0	1	1	1	1	[2Fe-2S]	binding	domain
Fer2	PF00111.22	gi|15920272|ref|NP_375941.1|	-	3.7e-08	33.0	0.3	8.9e-08	31.7	0.2	1.7	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer2_3	PF13085.1	gi|15920272|ref|NP_375941.1|	-	8.3e-07	28.8	0.3	4.2e-06	26.5	0.0	2.3	3	0	0	3	3	3	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Transaldolase	PF00923.14	gi|15920272|ref|NP_375941.1|	-	0.021	13.9	0.0	0.034	13.2	0.0	1.3	1	0	0	1	1	1	0	Transaldolase
ECH	PF00378.15	gi|15920273|ref|NP_375942.1|	-	8.3e-47	159.3	0.0	9.9e-47	159.1	0.0	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
Pyrophosphatase	PF00719.14	gi|15920273|ref|NP_375942.1|	-	0.086	12.2	0.7	0.21	10.9	0.1	1.8	2	0	0	2	2	2	0	Inorganic	pyrophosphatase
Thiolase_C	PF02803.13	gi|15920275|ref|NP_375944.1|	-	7.3e-06	25.4	0.1	1.6e-05	24.3	0.1	1.6	1	0	0	1	1	1	1	Thiolase,	C-terminal	domain
Thiolase_N	PF00108.18	gi|15920275|ref|NP_375944.1|	-	1.5e-05	24.0	0.0	0.00076	18.5	0.0	2.2	2	0	0	2	2	2	1	Thiolase,	N-terminal	domain
ACP_syn_III	PF08545.5	gi|15920275|ref|NP_375944.1|	-	1.9e-05	24.2	0.0	0.0035	16.9	0.0	2.4	2	0	0	2	2	2	2	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
FAE1_CUT1_RppA	PF08392.7	gi|15920275|ref|NP_375944.1|	-	0.0036	16.4	0.1	0.0073	15.4	0.1	1.5	1	0	0	1	1	1	1	FAE1/Type	III	polyketide	synthase-like	protein
DUF2194	PF09960.4	gi|15920275|ref|NP_375944.1|	-	0.0036	15.4	0.3	0.0049	14.9	0.2	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2194)
DUF3211	PF11485.3	gi|15920276|ref|NP_375945.1|	-	5.1e-45	152.8	7.0	5.7e-45	152.6	4.9	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3211)
EF-hand_1	PF00036.27	gi|15920276|ref|NP_375945.1|	-	0.013	14.7	0.5	0.028	13.7	0.0	1.9	2	0	0	2	2	2	0	EF	hand
EF-hand_8	PF13833.1	gi|15920276|ref|NP_375945.1|	-	0.064	12.8	0.0	0.17	11.5	0.0	1.7	2	0	0	2	2	2	0	EF-hand	domain	pair
ELFV_dehydrog_N	PF02812.13	gi|15920277|ref|NP_375946.1|	-	8.3e-06	25.4	0.0	1.1e-05	25.0	0.0	1.1	1	0	0	1	1	1	1	Glu/Leu/Phe/Val	dehydrogenase,	dimerisation	domain
DDE_Tnp_IS1	PF03400.8	gi|15920278|ref|NP_375947.1|	-	2.3e-11	43.9	1.1	2.3e-11	43.9	0.7	1.7	2	0	0	2	2	2	1	IS1	transposase
DDE_Tnp_IS66	PF03050.9	gi|15920278|ref|NP_375947.1|	-	0.00019	20.7	2.0	0.00031	20.0	1.4	1.4	1	1	0	1	1	1	1	Transposase	IS66	family
zf-Mss51	PF13824.1	gi|15920278|ref|NP_375947.1|	-	0.00052	19.8	0.7	0.0012	18.6	0.5	1.6	1	0	0	1	1	1	1	Zinc-finger	of	mitochondrial	splicing	suppressor	51
HTH_17	PF12728.2	gi|15920278|ref|NP_375947.1|	-	0.0021	18.2	0.0	1.3	9.3	0.0	2.7	2	0	0	2	2	2	1	Helix-turn-helix	domain
Zn_Tnp_IS1	PF03811.8	gi|15920278|ref|NP_375947.1|	-	0.0024	17.3	3.1	0.0049	16.3	2.2	1.5	1	0	0	1	1	1	1	InsA	N-terminal	domain
Zn_Tnp_IS1595	PF12760.2	gi|15920278|ref|NP_375947.1|	-	0.0065	16.2	4.8	0.013	15.2	3.3	1.5	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
DUF2225	PF09986.4	gi|15920278|ref|NP_375947.1|	-	0.0087	15.5	0.9	0.0087	15.5	0.6	2.1	1	1	1	2	2	2	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2225)
DUF2387	PF09526.5	gi|15920278|ref|NP_375947.1|	-	0.032	14.1	1.1	0.056	13.3	0.7	1.3	1	0	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
HTH_28	PF13518.1	gi|15920278|ref|NP_375947.1|	-	0.048	13.6	0.3	1.9	8.5	0.0	2.6	2	0	0	2	2	2	0	Helix-turn-helix	domain
Zn-ribbon_8	PF09723.5	gi|15920278|ref|NP_375947.1|	-	0.07	13.1	5.8	2.1	8.3	0.8	2.4	2	0	0	2	2	2	0	Zinc	ribbon	domain
HTH_38	PF13936.1	gi|15920278|ref|NP_375947.1|	-	0.071	12.6	0.2	0.32	10.5	0.1	2.0	2	0	0	2	2	2	0	Helix-turn-helix	domain
zf-met2	PF12907.2	gi|15920278|ref|NP_375947.1|	-	0.078	12.9	1.9	0.13	12.1	0.6	1.9	2	0	0	2	2	2	0	Zinc-binding
DUF1289	PF06945.8	gi|15920278|ref|NP_375947.1|	-	0.086	12.3	0.8	0.17	11.3	0.6	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1289)
TF_Zn_Ribbon	PF08271.7	gi|15920278|ref|NP_375947.1|	-	0.18	11.1	1.4	2.1	7.7	1.0	2.1	1	1	1	2	2	2	0	TFIIB	zinc-binding
zinc_ribbon_5	PF13719.1	gi|15920278|ref|NP_375947.1|	-	0.74	9.4	4.4	1.4	8.5	3.1	1.5	1	0	0	1	1	1	0	zinc-ribbon	domain
zf-H2C2_2	PF13465.1	gi|15920278|ref|NP_375947.1|	-	0.77	10.1	9.3	0.11	12.8	1.2	2.7	2	0	0	2	2	2	0	Zinc-finger	double	domain
zinc_ribbon_4	PF13717.1	gi|15920278|ref|NP_375947.1|	-	1.3	8.8	4.1	2.5	7.8	2.9	1.5	1	0	0	1	1	1	0	zinc-ribbon	domain
ELFV_dehydrog	PF00208.16	gi|15920279|ref|NP_375948.1|	-	8.7e-13	48.4	0.1	9.8e-13	48.2	0.0	1.0	1	0	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
DUF1404	PF07185.6	gi|15920281|ref|NP_375950.1|	-	1.2e-49	168.1	28.9	1.3e-49	167.9	20.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1404)
DDDD	PF10161.4	gi|15920281|ref|NP_375950.1|	-	0.95	9.1	3.0	0.52	9.9	0.5	1.7	2	0	0	2	2	2	0	Putative	mitochondrial	precursor	protein
COX1	PF00115.15	gi|15920282|ref|NP_375951.1|	-	8.7e-131	436.6	59.2	8.7e-131	436.6	41.1	2.5	2	1	0	2	2	2	1	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
COX3	PF00510.13	gi|15920282|ref|NP_375951.1|	-	4.2e-15	55.8	16.1	4.2e-15	55.8	11.1	3.0	3	0	0	3	3	3	1	Cytochrome	c	oxidase	subunit	III
SoxE	PF06525.6	gi|15920283|ref|NP_375952.1|	-	2.1e-76	255.5	13.1	2.4e-76	255.4	9.1	1.0	1	0	0	1	1	1	1	Sulfocyanin	(SoxE)
DUF2861	PF11060.3	gi|15920283|ref|NP_375952.1|	-	0.069	12.4	0.0	0.11	11.8	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2861)
COX2	PF00116.15	gi|15920284|ref|NP_375953.1|	-	3.5e-18	65.5	0.2	4.1e-17	62.1	0.0	2.0	1	1	1	2	2	2	2	Cytochrome	C	oxidase	subunit	II,	periplasmic	domain
Cupredoxin_1	PF13473.1	gi|15920284|ref|NP_375953.1|	-	0.0087	15.9	0.0	0.012	15.5	0.0	1.2	1	0	0	1	1	1	1	Cupredoxin-like	domain
CopD	PF05425.8	gi|15920285|ref|NP_375954.1|	-	0.059	13.5	1.0	0.059	13.5	0.7	2.1	2	1	0	2	2	2	0	Copper	resistance	protein	D
Srg	PF02118.16	gi|15920285|ref|NP_375954.1|	-	0.17	11.3	8.6	0.23	10.8	6.0	1.2	1	0	0	1	1	1	0	Srg	family	chemoreceptor
Yip1	PF04893.12	gi|15920285|ref|NP_375954.1|	-	0.17	11.3	12.5	0.26	10.7	8.7	1.2	1	0	0	1	1	1	0	Yip1	domain
DUF2104	PF09877.4	gi|15920285|ref|NP_375954.1|	-	0.56	10.2	5.7	0.07	13.0	1.1	1.8	2	1	0	2	2	2	0	Predicted	membrane	protein	(DUF2104)
Cytochrom_B_C	PF00032.12	gi|15920285|ref|NP_375954.1|	-	1.8	8.8	9.8	0.14	12.4	1.6	2.5	1	1	1	3	3	3	0	Cytochrome	b(C-terminal)/b6/petD
DUF805	PF05656.9	gi|15920285|ref|NP_375954.1|	-	7	6.5	13.0	1.8e+02	1.9	9.0	2.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF805)
Claudin_2	PF13903.1	gi|15920285|ref|NP_375954.1|	-	7	6.3	12.1	2e+02	1.5	8.4	2.3	1	1	0	1	1	1	0	PMP-22/EMP/MP20/Claudin	tight	junction
DUF1129	PF06570.6	gi|15920285|ref|NP_375954.1|	-	7.8	5.7	7.1	11	5.2	4.9	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1129)
DUF1077	PF06417.7	gi|15920286|ref|NP_375955.1|	-	1.2	8.4	4.1	0.85	8.9	1.4	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1077)
Rieske	PF00355.21	gi|15920287|ref|NP_375956.1|	-	1.7e-14	53.1	0.0	2.8e-14	52.4	0.0	1.4	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
TAT_signal	PF10518.4	gi|15920287|ref|NP_375956.1|	-	0.08	12.9	0.1	0.17	11.9	0.0	1.6	1	0	0	1	1	1	0	TAT	(twin-arginine	translocation)	pathway	signal	sequence
UCR_Fe-S_N	PF10399.4	gi|15920287|ref|NP_375956.1|	-	0.11	11.6	0.0	0.19	10.8	0.0	1.4	1	0	0	1	1	1	0	Ubiquitinol-cytochrome	C	reductase	Fe-S	subunit	TAT	signal
Cytochrom_B_N_2	PF13631.1	gi|15920288|ref|NP_375957.1|	-	1.6e-31	109.4	8.6	1.6e-31	109.4	6.0	2.6	4	0	0	4	4	4	1	Cytochrome	b(N-terminal)/b6/petB
Cytochrom_B_C	PF00032.12	gi|15920288|ref|NP_375957.1|	-	3.1e-06	27.3	4.5	3.1e-06	27.3	3.1	3.8	5	1	2	7	7	7	1	Cytochrome	b(C-terminal)/b6/petD
Cytochrom_B_N	PF00033.14	gi|15920288|ref|NP_375957.1|	-	0.0001	21.7	22.2	0.0001	21.7	15.4	3.2	2	2	1	3	3	3	1	Cytochrome	b(N-terminal)/b6/petB
Ni_hydr_CYTB	PF01292.15	gi|15920288|ref|NP_375957.1|	-	0.005	16.2	16.8	0.1	11.9	3.2	3.1	2	2	0	2	2	2	2	Prokaryotic	cytochrome	b561
DrsE	PF02635.10	gi|15920290|ref|NP_375959.1|	-	0.007	16.4	0.1	0.009	16.0	0.0	1.3	1	1	0	1	1	1	1	DsrE/DsrF-like	family
DUF2124	PF09897.4	gi|15920290|ref|NP_375959.1|	-	0.14	11.8	0.0	1.1	8.9	0.0	1.9	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2124)
HTH_24	PF13412.1	gi|15920291|ref|NP_375960.1|	-	7.9e-20	69.9	3.6	8.8e-10	37.8	0.2	2.5	2	0	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|15920291|ref|NP_375960.1|	-	1.8e-12	46.5	0.0	5.3e-05	22.6	0.0	2.2	2	0	0	2	2	2	2	AsnC-type	helix-turn-helix	domain
HTH_Mga	PF08280.6	gi|15920291|ref|NP_375960.1|	-	1.1e-06	28.2	6.9	0.012	15.3	0.1	3.1	3	0	0	3	3	3	2	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_11	PF08279.7	gi|15920291|ref|NP_375960.1|	-	1.1e-05	24.9	0.8	0.055	13.1	0.0	3.2	3	1	1	4	4	4	2	HTH	domain
HTH_5	PF01022.15	gi|15920291|ref|NP_375960.1|	-	2.1e-05	24.1	1.3	0.00099	18.7	0.0	2.4	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
MarR	PF01047.17	gi|15920291|ref|NP_375960.1|	-	0.00018	21.1	0.1	0.67	9.7	0.0	2.6	2	0	0	2	2	2	2	MarR	family
TrmB	PF01978.14	gi|15920291|ref|NP_375960.1|	-	0.0002	21.0	1.0	0.0012	18.4	0.0	2.5	3	0	0	3	3	3	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_23	PF13384.1	gi|15920291|ref|NP_375960.1|	-	0.00066	19.2	0.0	0.1	12.2	0.0	2.4	2	0	0	2	2	2	1	Homeodomain-like	domain
Sigma70_r4_2	PF08281.7	gi|15920291|ref|NP_375960.1|	-	0.0024	17.2	0.0	0.021	14.2	0.0	2.2	2	0	0	2	2	2	1	Sigma-70,	region	4
HTH_10	PF04967.7	gi|15920291|ref|NP_375960.1|	-	0.005	16.3	0.4	0.34	10.5	0.0	2.6	2	0	0	2	2	2	1	HTH	DNA	binding	domain
MarR_2	PF12802.2	gi|15920291|ref|NP_375960.1|	-	0.0068	16.0	0.0	0.19	11.4	0.0	2.2	2	0	0	2	2	2	1	MarR	family
KorB	PF08535.5	gi|15920291|ref|NP_375960.1|	-	0.0087	16.1	0.0	0.027	14.6	0.0	1.8	1	0	0	1	1	1	1	KorB	domain
HTH_20	PF12840.2	gi|15920291|ref|NP_375960.1|	-	0.023	14.4	0.0	4.6	7.1	0.0	2.2	2	0	0	2	2	2	0	Helix-turn-helix	domain
RepL	PF05732.6	gi|15920291|ref|NP_375960.1|	-	0.028	13.6	0.2	0.54	9.4	0.1	2.2	2	0	0	2	2	2	0	Firmicute	plasmid	replication	protein	(RepL)
IF2_N	PF04760.10	gi|15920291|ref|NP_375960.1|	-	0.047	13.3	0.3	4.5	7.0	0.1	2.6	2	0	0	2	2	2	0	Translation	initiation	factor	IF-2,	N-terminal	region
HTH_28	PF13518.1	gi|15920291|ref|NP_375960.1|	-	0.086	12.8	0.0	3.4	7.7	0.0	2.4	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_38	PF13936.1	gi|15920291|ref|NP_375960.1|	-	0.1	12.1	0.1	1.3	8.6	0.0	2.4	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_36	PF13730.1	gi|15920291|ref|NP_375960.1|	-	0.11	12.6	2.0	4.1	7.6	0.0	3.0	3	0	0	3	3	2	0	Helix-turn-helix	domain
GerE	PF00196.14	gi|15920291|ref|NP_375960.1|	-	0.15	11.3	0.0	0.15	11.3	0.0	3.3	4	0	0	4	4	4	0	Bacterial	regulatory	proteins,	luxR	family
TFIIE_alpha	PF02002.12	gi|15920291|ref|NP_375960.1|	-	0.27	10.7	1.8	0.98	8.9	0.1	2.3	2	0	0	2	2	2	0	TFIIE	alpha	subunit
NUMOD1	PF07453.8	gi|15920291|ref|NP_375960.1|	-	0.59	10.0	6.3	2.4	8.1	0.1	3.2	3	0	0	3	3	2	0	NUMOD1	domain
Acetyltransf_1	PF00583.19	gi|15920292|ref|NP_375961.1|	-	2.1e-14	53.3	0.1	2.8e-14	52.9	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|15920292|ref|NP_375961.1|	-	3.1e-12	46.4	0.1	4.5e-12	45.9	0.1	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|15920292|ref|NP_375961.1|	-	6.3e-12	45.7	0.1	7.6e-12	45.4	0.1	1.0	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|15920292|ref|NP_375961.1|	-	1.6e-08	34.6	0.0	1.9e-08	34.4	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|15920292|ref|NP_375961.1|	-	3.3e-08	33.1	0.0	6e-08	32.3	0.0	1.4	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_9	PF13527.1	gi|15920292|ref|NP_375961.1|	-	9e-08	32.0	0.0	1.2e-07	31.6	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.1	gi|15920292|ref|NP_375961.1|	-	7.8e-05	22.8	0.0	8.5e-05	22.7	0.0	1.0	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.1	gi|15920292|ref|NP_375961.1|	-	0.00075	19.4	0.0	0.0011	18.9	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.1	gi|15920292|ref|NP_375961.1|	-	0.0019	18.0	0.0	0.01	15.6	0.0	2.0	1	1	0	1	1	1	1	GCN5-related	N-acetyl-transferase
Acetyltransf_13	PF13880.1	gi|15920292|ref|NP_375961.1|	-	0.015	15.0	0.0	0.033	13.9	0.0	1.5	1	1	0	1	1	1	0	ESCO1/2	acetyl-transferase
Acetyltransf_6	PF13480.1	gi|15920292|ref|NP_375961.1|	-	0.021	14.8	0.0	0.03	14.2	0.0	1.3	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
Mec-17	PF05301.6	gi|15920292|ref|NP_375961.1|	-	0.081	12.8	0.0	0.12	12.2	0.0	1.3	1	0	0	1	1	1	0	Touch	receptor	neuron	protein	Mec-17
Malic_M	PF03949.10	gi|15920293|ref|NP_375962.1|	-	2.6e-66	223.7	1.5	3.2e-66	223.4	1.0	1.1	1	0	0	1	1	1	1	Malic	enzyme,	NAD	binding	domain
malic	PF00390.14	gi|15920293|ref|NP_375962.1|	-	8.1e-26	90.7	0.1	7.6e-23	81.0	0.1	2.6	1	1	0	1	1	1	1	Malic	enzyme,	N-terminal	domain
ThiF	PF00899.16	gi|15920293|ref|NP_375962.1|	-	0.013	15.3	0.2	1.1	9.0	0.0	3.1	3	0	0	3	3	3	0	ThiF	family
DUF929	PF06053.6	gi|15920294|ref|NP_375963.1|	-	9.1e-87	290.2	18.3	1.1e-86	290.0	12.7	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF929)
PsbY	PF06298.6	gi|15920294|ref|NP_375963.1|	-	0.0013	18.2	0.5	0.0037	16.7	0.3	1.8	1	0	0	1	1	1	1	Photosystem	II	protein	Y	(PsbY)
DUF843	PF05814.6	gi|15920294|ref|NP_375963.1|	-	0.004	16.9	1.6	0.008	15.9	1.1	1.4	1	0	0	1	1	1	1	Baculovirus	protein	of	unknown	function	(DUF843)
FtsX	PF02687.16	gi|15920294|ref|NP_375963.1|	-	0.11	12.2	3.3	7.6	6.3	1.1	2.6	2	0	0	2	2	2	0	FtsX-like	permease	family
DUF4234	PF14018.1	gi|15920294|ref|NP_375963.1|	-	2.4	7.9	6.2	4.4	7.1	0.3	2.8	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4234)
Class_IIIsignal	PF04021.7	gi|15920294|ref|NP_375963.1|	-	6.7	6.5	9.5	19	5.1	6.6	1.8	1	0	0	1	1	1	0	Class	III	signal	peptide
CoA_binding_2	PF13380.1	gi|15920295|ref|NP_375964.1|	-	2.4e-36	124.4	0.0	2.9e-36	124.1	0.0	1.1	1	0	0	1	1	1	1	CoA	binding	domain
CoA_binding	PF02629.14	gi|15920295|ref|NP_375964.1|	-	2.4e-06	27.9	0.0	3.7e-06	27.3	0.0	1.3	1	0	0	1	1	1	1	CoA	binding	domain
SseB_C	PF14581.1	gi|15920295|ref|NP_375964.1|	-	0.048	13.5	0.0	0.095	12.5	0.0	1.5	1	0	0	1	1	1	0	SseB	protein	C-terminal	domain
FBD	PF08387.5	gi|15920295|ref|NP_375964.1|	-	0.26	10.7	1.6	0.48	9.9	0.5	1.8	2	0	0	2	2	2	0	FBD
XdhC_C	PF13478.1	gi|15920299|ref|NP_375968.1|	-	7.1e-20	71.7	0.1	1e-19	71.1	0.0	1.3	1	0	0	1	1	1	1	XdhC	Rossmann	domain
2-Hacid_dh_C	PF02826.14	gi|15920299|ref|NP_375968.1|	-	0.018	14.2	0.1	0.027	13.6	0.1	1.3	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
FumaraseC_C	PF10415.4	gi|15920299|ref|NP_375968.1|	-	0.019	15.0	0.5	0.019	15.0	0.3	2.5	3	0	0	3	3	3	0	Fumarase	C	C-terminus
ABC_tran	PF00005.22	gi|15920300|ref|NP_375969.1|	-	0.025	14.8	0.1	0.15	12.3	0.0	2.3	2	0	0	2	2	2	0	ABC	transporter
DUF1833	PF08875.6	gi|15920300|ref|NP_375969.1|	-	0.038	13.1	0.0	5.4	6.1	0.0	2.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1833)
AAA_18	PF13238.1	gi|15920300|ref|NP_375969.1|	-	0.48	10.7	5.6	0.14	12.5	0.2	3.1	3	2	1	4	4	4	0	AAA	domain
Ninjurin	PF04923.7	gi|15920301|ref|NP_375970.1|	-	0.45	10.2	7.5	0.17	11.6	1.2	2.5	2	1	0	2	2	2	0	Ninjurin
UPF0066	PF01980.11	gi|15920302|ref|NP_375971.1|	-	3.1e-33	114.2	0.0	5.1e-33	113.5	0.0	1.3	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0066
Radical_SAM	PF04055.16	gi|15920303|ref|NP_375972.1|	-	4.6e-25	88.7	0.0	1.2e-23	84.1	0.0	2.3	1	1	1	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|15920303|ref|NP_375972.1|	-	1.4e-09	38.1	0.0	5.2e-09	36.3	0.0	1.9	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|15920303|ref|NP_375972.1|	-	2e-09	37.5	0.0	8.7e-09	35.4	0.0	2.0	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
SPASM	PF13186.1	gi|15920303|ref|NP_375972.1|	-	9.5e-09	35.4	0.4	2.8e-08	33.9	0.2	1.8	1	0	0	1	1	1	1	Iron-sulfur	cluster-binding	domain
AP_endonuc_2	PF01261.19	gi|15920303|ref|NP_375972.1|	-	7.3e-06	25.4	0.0	0.00053	19.3	0.0	2.2	2	0	0	2	2	2	2	Xylose	isomerase-like	TIM	barrel
Radical_SAM	PF04055.16	gi|15920304|ref|NP_375973.1|	-	8.8e-14	52.0	0.0	2.6e-13	50.5	0.0	1.8	1	1	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|15920304|ref|NP_375973.1|	-	8.8e-07	29.1	0.0	1.9e-06	28.0	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|15920304|ref|NP_375973.1|	-	7.7e-06	25.9	0.0	1.5e-05	24.9	0.0	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
SPASM	PF13186.1	gi|15920304|ref|NP_375973.1|	-	0.00027	21.2	0.0	0.00027	21.2	0.0	2.0	2	0	0	2	2	2	1	Iron-sulfur	cluster-binding	domain
YyzF	PF14116.1	gi|15920304|ref|NP_375973.1|	-	0.071	13.0	0.1	2.2	8.2	0.1	2.8	3	0	0	3	3	3	0	YyzF-like	protein
Aldo_ket_red	PF00248.16	gi|15920307|ref|NP_375976.1|	-	4.3e-67	225.9	0.1	4.9e-67	225.7	0.1	1.0	1	0	0	1	1	1	1	Aldo/keto	reductase	family
DUF4064	PF13273.1	gi|15920308|ref|NP_375977.1|	-	0.0044	17.0	15.2	0.011	15.8	2.2	2.2	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF4064)
OppC_N	PF12911.2	gi|15920308|ref|NP_375977.1|	-	0.065	12.6	9.2	0.19	11.1	0.1	2.6	3	0	0	3	3	3	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
7TMR-DISM_7TM	PF07695.6	gi|15920309|ref|NP_375978.1|	-	0.0031	17.2	13.7	0.0048	16.5	9.4	1.3	1	1	0	1	1	1	1	7TM	diverse	intracellular	signalling
DUF2919	PF11143.3	gi|15920309|ref|NP_375978.1|	-	0.0037	17.1	4.4	0.0037	17.1	3.0	1.7	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF2919)
DUF1129	PF06570.6	gi|15920309|ref|NP_375978.1|	-	0.14	11.4	5.2	0.11	11.8	2.8	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1129)
DUF1240	PF06836.7	gi|15920310|ref|NP_375979.1|	-	8.1	6.7	7.8	0.53	10.5	0.9	2.3	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1240)
ABC2_membrane_3	PF12698.2	gi|15920311|ref|NP_375980.1|	-	0.075	12.0	9.5	0.082	11.9	6.6	1.0	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
DUF2427	PF10348.4	gi|15920311|ref|NP_375980.1|	-	0.13	11.8	3.4	0.14	11.7	2.4	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF2427)
DUF1129	PF06570.6	gi|15920311|ref|NP_375980.1|	-	0.63	9.3	3.3	0.75	9.0	2.3	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1129)
DUF1469	PF07332.6	gi|15920311|ref|NP_375980.1|	-	2.7	7.7	6.5	3.2	7.4	4.5	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1469)
DUF4231	PF14015.1	gi|15920311|ref|NP_375980.1|	-	5.4	7.0	5.7	6.6	6.7	3.9	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4231)
TRIQK	PF15168.1	gi|15920311|ref|NP_375980.1|	-	7.5	6.5	8.4	0.88	9.5	0.8	2.0	1	1	1	2	2	2	0	Triple	QxxK/R	motif-containing	protein	family
Rieske	PF00355.21	gi|15920312|ref|NP_375981.1|	-	2.4e-10	39.8	0.9	6.9e-10	38.3	0.6	1.7	1	1	0	1	1	1	1	Rieske	[2Fe-2S]	domain
UCR_Fe-S_N	PF10399.4	gi|15920312|ref|NP_375981.1|	-	0.025	13.7	0.4	0.074	12.2	0.2	1.9	1	1	0	1	1	1	0	Ubiquitinol-cytochrome	C	reductase	Fe-S	subunit	TAT	signal
EGF_alliinase	PF04863.8	gi|15920312|ref|NP_375981.1|	-	0.068	13.1	2.1	0.78	9.7	0.4	2.5	2	0	0	2	2	2	0	Alliinase	EGF-like	domain
T_cell_tran_alt	PF15128.1	gi|15920313|ref|NP_375982.1|	-	0.023	14.1	0.2	0.06	12.7	0.1	1.7	2	0	0	2	2	2	0	T-cell	leukemia	translocation-altered
COX1	PF00115.15	gi|15920314|ref|NP_375983.1|	-	9.5e-79	265.1	51.1	1.3e-78	264.6	35.4	1.0	1	0	0	1	1	1	1	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
Cytochrom_B_N_2	PF13631.1	gi|15920315|ref|NP_375984.1|	-	1.2e-54	184.6	7.1	1.2e-54	184.6	4.9	3.8	4	1	1	5	5	5	2	Cytochrome	b(N-terminal)/b6/petB
Cytochrom_B_C	PF00032.12	gi|15920315|ref|NP_375984.1|	-	0.0011	19.2	6.8	0.0011	19.2	4.7	3.8	4	1	0	4	4	4	1	Cytochrome	b(C-terminal)/b6/petD
DUF1404	PF07185.6	gi|15920316|ref|NP_375985.1|	-	1.7e-58	196.9	19.4	1.9e-58	196.7	13.4	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1404)
HPP	PF04982.8	gi|15920317|ref|NP_375986.1|	-	4.9e-07	29.6	5.4	4.9e-07	29.6	3.8	1.8	1	1	1	2	2	2	1	HPP	family
DUF1422	PF07226.6	gi|15920317|ref|NP_375986.1|	-	0.98	9.1	8.5	0.59	9.8	4.4	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1422)
DUF973	PF06157.6	gi|15920319|ref|NP_375988.1|	-	1.4e-14	53.8	5.8	1.4e-14	53.8	4.0	2.0	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF973)
DUF3040	PF11239.3	gi|15920319|ref|NP_375988.1|	-	0.82	9.7	3.1	1.4	8.9	2.2	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3040)
DUF1469	PF07332.6	gi|15920319|ref|NP_375988.1|	-	1.4	8.6	6.0	2	8.1	4.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1469)
HTH_23	PF13384.1	gi|15920320|ref|NP_375989.1|	-	3.6e-08	32.7	0.1	9.8e-08	31.4	0.1	1.8	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.1	gi|15920320|ref|NP_375989.1|	-	5.2e-07	29.5	0.1	1.2e-06	28.3	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
Terminase_5	PF06056.7	gi|15920320|ref|NP_375989.1|	-	9.2e-07	28.3	0.1	2e-06	27.2	0.0	1.6	1	0	0	1	1	1	1	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_38	PF13936.1	gi|15920320|ref|NP_375989.1|	-	2.5e-05	23.7	0.0	4.7e-05	22.8	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
Zn_Tnp_IS1	PF03811.8	gi|15920320|ref|NP_375989.1|	-	6.6e-05	22.3	8.2	0.00019	20.8	5.7	1.8	1	0	0	1	1	1	1	InsA	N-terminal	domain
Sigma70_r4_2	PF08281.7	gi|15920320|ref|NP_375989.1|	-	0.00038	19.8	0.0	0.00073	18.9	0.0	1.4	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_29	PF13551.1	gi|15920320|ref|NP_375989.1|	-	0.00065	19.8	0.0	0.0012	18.9	0.0	1.5	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_Tnp_1	PF01527.15	gi|15920320|ref|NP_375989.1|	-	0.0072	16.2	0.1	0.018	15.0	0.0	1.6	1	0	0	1	1	1	1	Transposase
HTH_40	PF14493.1	gi|15920320|ref|NP_375989.1|	-	0.011	15.9	0.0	0.017	15.3	0.0	1.5	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_Tnp_ISL3	PF13542.1	gi|15920320|ref|NP_375989.1|	-	0.015	14.4	0.0	0.039	13.1	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_Tnp_IS630	PF01710.11	gi|15920320|ref|NP_375989.1|	-	0.018	14.7	0.6	0.042	13.5	0.2	1.8	2	0	0	2	2	2	0	Transposase
Zn_Tnp_IS1595	PF12760.2	gi|15920320|ref|NP_375989.1|	-	0.057	13.2	5.1	0.12	12.2	3.5	1.5	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|15920320|ref|NP_375989.1|	-	0.062	12.9	1.5	0.16	11.6	1.0	1.6	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
DZR	PF12773.2	gi|15920320|ref|NP_375989.1|	-	0.2	11.4	2.8	3.2	7.6	2.0	2.2	1	1	0	1	1	1	0	Double	zinc	ribbon
Lar_restr_allev	PF14354.1	gi|15920320|ref|NP_375989.1|	-	0.53	10.6	2.4	1.2	9.5	0.4	2.3	2	0	0	2	2	2	0	Restriction	alleviation	protein	Lar
Zn-ribbon_8	PF09723.5	gi|15920320|ref|NP_375989.1|	-	0.88	9.5	5.4	3.7	7.5	0.6	2.6	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-ISL3	PF14690.1	gi|15920320|ref|NP_375989.1|	-	2.4	8.2	11.1	11	6.1	1.8	2.9	1	1	2	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-ribbon_3	PF13248.1	gi|15920320|ref|NP_375989.1|	-	2.5	7.4	5.0	20	4.5	2.0	2.8	2	1	0	2	2	2	0	zinc-ribbon	domain
Nudix_N_2	PF14803.1	gi|15920320|ref|NP_375989.1|	-	4.8	6.9	6.8	11	5.7	4.7	1.6	1	0	0	1	1	1	0	Nudix	N-terminal
DDE_Tnp_IS240	PF13610.1	gi|15920321|ref|NP_375990.1|	-	5.8e-06	26.3	0.6	8.2e-06	25.8	0.4	1.2	1	0	0	1	1	1	1	DDE	domain
DDE_Tnp_IS66	PF03050.9	gi|15920321|ref|NP_375990.1|	-	0.0011	18.2	0.0	0.0022	17.2	0.0	1.3	1	1	0	1	1	1	1	Transposase	IS66	family
DNA_primase_S	PF01896.14	gi|15920321|ref|NP_375990.1|	-	0.072	12.9	0.2	0.14	11.9	0.2	1.4	1	1	0	1	1	1	0	Eukaryotic	and	archaeal	DNA	primase	small	subunit
DEAD	PF00270.24	gi|15920324|ref|NP_375993.1|	-	1.9e-17	63.2	0.0	7.4e-16	58.0	0.0	2.3	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|15920324|ref|NP_375993.1|	-	4.8e-15	55.1	0.0	1e-14	54.1	0.0	1.6	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
AAA_22	PF13401.1	gi|15920324|ref|NP_375993.1|	-	1.1e-07	32.0	0.0	3.3e-07	30.4	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
ResIII	PF04851.10	gi|15920324|ref|NP_375993.1|	-	2.7e-06	27.3	0.0	3.4e-05	23.7	0.0	2.3	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
AAA	PF00004.24	gi|15920324|ref|NP_375993.1|	-	0.0028	17.8	0.1	0.013	15.7	0.0	2.2	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Arch_ATPase	PF01637.13	gi|15920324|ref|NP_375993.1|	-	0.011	15.4	0.2	0.028	14.1	0.1	1.7	1	0	0	1	1	1	0	Archaeal	ATPase
IstB_IS21	PF01695.12	gi|15920324|ref|NP_375993.1|	-	0.011	15.1	0.0	0.2	11.0	0.0	2.2	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA_17	PF13207.1	gi|15920324|ref|NP_375993.1|	-	0.018	15.8	0.2	0.018	15.8	0.2	2.8	3	2	0	3	3	3	0	AAA	domain
Zot	PF05707.7	gi|15920324|ref|NP_375993.1|	-	0.035	13.5	0.1	0.16	11.4	0.0	2.0	2	0	0	2	2	2	0	Zonular	occludens	toxin	(Zot)
AAA_18	PF13238.1	gi|15920324|ref|NP_375993.1|	-	0.037	14.3	0.4	0.1	12.9	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
Zeta_toxin	PF06414.7	gi|15920324|ref|NP_375993.1|	-	0.061	12.4	0.0	0.4	9.7	0.0	2.1	2	0	0	2	2	2	0	Zeta	toxin
DUF87	PF01935.12	gi|15920324|ref|NP_375993.1|	-	0.066	13.0	0.0	0.24	11.1	0.0	1.9	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF87
AAA_33	PF13671.1	gi|15920324|ref|NP_375993.1|	-	0.098	12.5	0.0	0.19	11.5	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
ATP-synt_ab	PF00006.20	gi|15920324|ref|NP_375993.1|	-	0.17	11.3	0.0	0.19	11.1	0.0	1.2	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
DrsE	PF02635.10	gi|15920325|ref|NP_375994.1|	-	3.4e-17	62.6	0.1	3.6e-17	62.5	0.0	1.0	1	0	0	1	1	1	1	DsrE/DsrF-like	family
DUF2067	PF09840.4	gi|15920325|ref|NP_375994.1|	-	0.088	12.2	0.4	0.094	12.2	0.3	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2067)
Cas_Csx8	PF09657.5	gi|15920325|ref|NP_375994.1|	-	0.15	10.7	1.3	0.16	10.6	0.9	1.1	1	0	0	1	1	1	0	CRISPR-associated	protein	Csx8	(Cas_Csx8)
SBP_bac_11	PF13531.1	gi|15920326|ref|NP_375995.1|	-	2.6e-10	40.3	0.0	3.5e-10	39.9	0.0	1.2	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
Phosphonate-bd	PF12974.2	gi|15920326|ref|NP_375995.1|	-	0.17	11.2	0.0	0.23	10.8	0.0	1.2	1	0	0	1	1	1	0	ABC	transporter,	phosphonate,	periplasmic	substrate-binding	protein
AA_permease	PF00324.16	gi|15920327|ref|NP_375996.1|	-	9.1e-30	103.4	61.5	2.2e-29	102.1	42.6	1.7	1	1	0	1	1	1	1	Amino	acid	permease
AA_permease_2	PF13520.1	gi|15920327|ref|NP_375996.1|	-	4.1e-26	91.5	58.7	4.1e-26	91.5	40.7	1.9	1	1	1	2	2	2	1	Amino	acid	permease
BamHI	PF02923.10	gi|15920327|ref|NP_375996.1|	-	0.074	12.9	0.0	0.13	12.2	0.0	1.3	1	0	0	1	1	1	0	Restriction	endonuclease	BamHI
DUF4516	PF14990.1	gi|15920327|ref|NP_375996.1|	-	1.1	8.8	4.3	1	8.9	0.3	2.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4516)
FmdA_AmdA	PF03069.10	gi|15920328|ref|NP_375997.1|	-	3.3e-67	226.7	0.1	9.1e-38	129.9	0.0	2.1	1	1	1	2	2	2	2	Acetamidase/Formamidase	family
OrfB_Zn_ribbon	PF07282.6	gi|15920329|ref|NP_375998.1|	-	1.9e-21	75.4	1.8	7.4e-21	73.5	0.2	2.3	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|15920329|ref|NP_375998.1|	-	4e-07	29.6	0.4	7.9e-07	28.7	0.3	1.5	1	0	0	1	1	1	1	Probable	transposase
OAF	PF14941.1	gi|15920329|ref|NP_375998.1|	-	0.015	14.4	0.1	0.027	13.6	0.1	1.3	1	0	0	1	1	1	0	Transcriptional	regulator,	Out	at	first
zf-C4_Topoisom	PF01396.14	gi|15920329|ref|NP_375998.1|	-	0.057	12.9	0.2	0.13	11.7	0.1	1.6	1	0	0	1	1	1	0	Topoisomerase	DNA	binding	C4	zinc	finger
PLU-1	PF08429.6	gi|15920329|ref|NP_375998.1|	-	0.095	11.5	0.2	0.14	10.9	0.1	1.2	1	0	0	1	1	1	0	PLU-1-like	protein
AAA_21	PF13304.1	gi|15920330|ref|NP_375999.1|	-	2e-22	80.5	23.9	3.3e-22	79.7	16.5	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|15920330|ref|NP_375999.1|	-	8.8e-22	77.7	35.4	4.4e-11	42.4	16.8	2.3	1	1	1	2	2	2	2	AAA	ATPase	domain
DUF2813	PF11398.3	gi|15920330|ref|NP_375999.1|	-	2.4e-08	33.4	2.1	1.1e-06	28.0	2.1	2.2	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2813)
AAA_23	PF13476.1	gi|15920330|ref|NP_375999.1|	-	1.4e-06	28.7	29.4	8.5e-06	26.2	20.3	2.5	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|15920330|ref|NP_375999.1|	-	1.6e-06	27.4	11.2	6.1e-06	25.6	5.7	2.7	2	1	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|15920330|ref|NP_375999.1|	-	0.00016	21.1	0.0	0.00035	20.0	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
MMR_HSR1	PF01926.18	gi|15920330|ref|NP_375999.1|	-	0.0053	16.7	5.5	0.0069	16.3	2.5	2.2	2	1	0	2	2	2	1	50S	ribosome-binding	GTPase
ABC_tran	PF00005.22	gi|15920330|ref|NP_375999.1|	-	0.022	15.0	5.2	0.065	13.5	3.6	1.8	1	1	0	1	1	1	0	ABC	transporter
Dynamin_N	PF00350.18	gi|15920330|ref|NP_375999.1|	-	0.11	12.2	3.3	1.4	8.7	2.3	2.5	1	1	0	1	1	1	0	Dynamin	family
PIN	PF01850.16	gi|15920331|ref|NP_376000.1|	-	3.3e-05	24.2	1.6	0.00018	21.8	1.1	2.0	1	1	0	1	1	1	1	PIN	domain
Amidohydro_2	PF04909.9	gi|15920332|ref|NP_376001.1|	-	9.6e-35	120.4	0.0	1.1e-34	120.3	0.0	1.0	1	0	0	1	1	1	1	Amidohydrolase
TatD_DNase	PF01026.16	gi|15920332|ref|NP_376001.1|	-	0.016	14.4	0.0	0.027	13.6	0.0	1.4	1	0	0	1	1	1	0	TatD	related	DNase
DUF1178	PF06676.6	gi|15920332|ref|NP_376001.1|	-	0.16	12.1	0.0	0.35	11.0	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1178)
Gln-synt_C	PF00120.19	gi|15920333|ref|NP_376002.1|	-	9.7e-79	264.1	0.0	1.6e-78	263.4	0.0	1.3	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
DUF973	PF06157.6	gi|15920334|ref|NP_376003.1|	-	3.1e-25	88.7	25.2	3.6e-25	88.5	17.5	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
DUF846	PF05832.7	gi|15920334|ref|NP_376003.1|	-	0.43	10.2	0.0	0.43	10.2	0.0	2.4	2	0	0	2	2	2	0	Eukaryotic	protein	of	unknown	function	(DUF846)
BCLP	PF12304.3	gi|15920334|ref|NP_376003.1|	-	0.57	9.5	5.6	0.093	12.1	0.5	2.0	2	0	0	2	2	2	0	Beta-casein	like	protein
DUF4293	PF14126.1	gi|15920334|ref|NP_376003.1|	-	1.5	8.7	10.9	17	5.3	3.1	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4293)
Claudin_2	PF13903.1	gi|15920334|ref|NP_376003.1|	-	1.8	8.2	8.3	5.4	6.6	3.8	2.4	1	1	1	2	2	2	0	PMP-22/EMP/MP20/Claudin	tight	junction
PMP22_Claudin	PF00822.15	gi|15920334|ref|NP_376003.1|	-	7.7	6.1	13.7	45	3.6	5.6	2.8	1	1	2	3	3	3	0	PMP-22/EMP/MP20/Claudin	family
DUF772	PF05598.6	gi|15920336|ref|NP_376005.1|	-	0.00046	20.0	0.0	0.00087	19.1	0.0	1.4	1	0	0	1	1	1	1	Transposase	domain	(DUF772)
HTH_24	PF13412.1	gi|15920337|ref|NP_376006.1|	-	3.8e-05	22.9	0.8	0.0001	21.6	0.2	1.9	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_34	PF13601.1	gi|15920337|ref|NP_376006.1|	-	0.00011	22.2	0.2	0.00018	21.4	0.1	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_45	PF14947.1	gi|15920337|ref|NP_376006.1|	-	0.00052	19.7	0.5	0.0012	18.5	0.3	1.7	2	0	0	2	2	2	1	Winged	helix-turn-helix
TrmB	PF01978.14	gi|15920337|ref|NP_376006.1|	-	0.00095	18.8	0.4	0.0019	17.8	0.0	1.7	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
MotA_activ	PF09114.5	gi|15920337|ref|NP_376006.1|	-	0.0014	18.3	0.1	0.0025	17.5	0.0	1.3	1	0	0	1	1	1	1	Transcription	factor	MotA,	activation	domain
THUMP	PF02926.12	gi|15920337|ref|NP_376006.1|	-	0.0019	18.0	1.2	0.0088	15.9	0.2	2.0	2	0	0	2	2	2	1	THUMP	domain
B-block_TFIIIC	PF04182.7	gi|15920337|ref|NP_376006.1|	-	0.015	15.1	0.1	0.032	14.0	0.1	1.6	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
MarR_2	PF12802.2	gi|15920337|ref|NP_376006.1|	-	0.022	14.4	0.0	0.043	13.4	0.0	1.5	1	0	0	1	1	1	0	MarR	family
HTH_27	PF13463.1	gi|15920337|ref|NP_376006.1|	-	0.028	14.7	0.1	0.18	12.1	0.0	2.2	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
MarR	PF01047.17	gi|15920337|ref|NP_376006.1|	-	0.035	13.8	0.1	0.078	12.6	0.0	1.6	1	0	0	1	1	1	0	MarR	family
RinB	PF06116.7	gi|15920337|ref|NP_376006.1|	-	0.041	13.5	0.1	0.18	11.4	0.0	2.2	2	0	0	2	2	2	0	Transcriptional	activator	RinB
HTH_9	PF08221.6	gi|15920337|ref|NP_376006.1|	-	0.091	12.6	0.0	0.23	11.3	0.0	1.6	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
DUF960	PF06124.6	gi|15920338|ref|NP_376007.1|	-	0.036	14.3	1.2	0.7	10.1	0.1	2.3	2	0	0	2	2	2	0	Staphylococcal	protein	of	unknown	function	(DUF960)
Plasmid_stabil	PF05016.9	gi|15920339|ref|NP_376008.1|	-	7.7e-06	26.2	0.0	9.2e-06	25.9	0.0	1.1	1	0	0	1	1	1	1	Plasmid	stabilisation	system	protein
Fer4	PF00037.22	gi|15920342|ref|NP_376011.1|	-	3.7e-14	51.6	13.9	3.5e-07	29.5	4.1	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|15920342|ref|NP_376011.1|	-	7.3e-12	45.3	6.9	9.6e-12	44.9	4.8	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|15920342|ref|NP_376011.1|	-	6.1e-10	38.5	14.1	4.1e-06	26.4	3.8	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|15920342|ref|NP_376011.1|	-	4.9e-09	35.8	18.7	4.9e-07	29.4	5.4	1.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|15920342|ref|NP_376011.1|	-	5.2e-09	36.3	8.4	8.3e-09	35.6	5.8	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|15920342|ref|NP_376011.1|	-	3.2e-08	33.2	5.5	4.2e-08	32.9	3.8	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|15920342|ref|NP_376011.1|	-	3.3e-08	33.4	10.3	1.2e-06	28.4	4.2	1.6	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|15920342|ref|NP_376011.1|	-	1.8e-06	27.7	8.3	0.017	15.3	2.3	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|15920342|ref|NP_376011.1|	-	1.9e-06	27.4	11.5	0.0068	16.2	0.6	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|15920342|ref|NP_376011.1|	-	3.5e-06	27.3	3.4	0.0019	18.5	0.6	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|15920342|ref|NP_376011.1|	-	1e-05	25.6	14.6	0.0077	16.7	4.6	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|15920342|ref|NP_376011.1|	-	3e-05	24.2	0.6	0.23	11.8	0.3	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|15920342|ref|NP_376011.1|	-	3.8e-05	23.9	9.9	0.018	15.4	0.3	2.3	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_15	PF13459.1	gi|15920342|ref|NP_376011.1|	-	4e-05	24.0	9.4	0.046	14.2	0.1	2.4	2	1	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_16	PF13484.1	gi|15920342|ref|NP_376011.1|	-	0.00035	21.2	8.1	0.0073	17.0	1.7	2.3	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
HTH_10	PF04967.7	gi|15920343|ref|NP_376012.1|	-	1.5e-20	72.5	0.2	2.6e-20	71.7	0.1	1.4	1	0	0	1	1	1	1	HTH	DNA	binding	domain
HTH_24	PF13412.1	gi|15920343|ref|NP_376012.1|	-	7.4e-07	28.4	0.7	2.5e-05	23.5	0.2	2.6	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_28	PF13518.1	gi|15920343|ref|NP_376012.1|	-	0.00096	19.1	0.1	0.0019	18.1	0.1	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
Mga	PF05043.8	gi|15920343|ref|NP_376012.1|	-	0.0025	18.0	0.4	0.014	15.6	0.3	2.2	1	1	0	1	1	1	1	Mga	helix-turn-helix	domain
MarR_2	PF12802.2	gi|15920343|ref|NP_376012.1|	-	0.0032	17.0	0.0	0.006	16.2	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_11	PF08279.7	gi|15920343|ref|NP_376012.1|	-	0.01	15.4	0.3	0.032	13.8	0.2	2.0	1	1	0	1	1	1	0	HTH	domain
MarR	PF01047.17	gi|15920343|ref|NP_376012.1|	-	0.011	15.4	0.1	0.025	14.2	0.1	1.5	1	0	0	1	1	1	0	MarR	family
HTH_AraC	PF00165.18	gi|15920343|ref|NP_376012.1|	-	0.012	15.3	0.6	0.052	13.3	0.0	2.2	2	0	0	2	2	2	0	Bacterial	regulatory	helix-turn-helix	proteins,	AraC	family
HTH_3	PF01381.17	gi|15920343|ref|NP_376012.1|	-	0.017	14.9	0.1	0.041	13.7	0.1	1.7	1	0	0	1	1	1	0	Helix-turn-helix
DUF3289	PF11692.3	gi|15920343|ref|NP_376012.1|	-	0.02	14.1	0.0	0.048	12.9	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3289)
DUF1044	PF06296.7	gi|15920343|ref|NP_376012.1|	-	0.038	13.8	1.1	5.8	6.7	0.0	2.6	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1044)
HTH_17	PF12728.2	gi|15920343|ref|NP_376012.1|	-	0.042	14.0	0.2	0.12	12.6	0.0	1.8	2	0	0	2	2	1	0	Helix-turn-helix	domain
HTH_Mga	PF08280.6	gi|15920343|ref|NP_376012.1|	-	0.043	13.5	0.0	0.16	11.7	0.0	2.0	2	0	0	2	2	1	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
EAP30	PF04157.11	gi|15920343|ref|NP_376012.1|	-	0.048	12.8	0.0	0.078	12.1	0.0	1.3	1	0	0	1	1	1	0	EAP30/Vps36	family
Fe_dep_repress	PF01325.14	gi|15920343|ref|NP_376012.1|	-	0.068	13.1	0.0	0.15	12.0	0.0	1.6	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
IF2_N	PF04760.10	gi|15920343|ref|NP_376012.1|	-	0.07	12.7	0.2	0.55	9.9	0.1	2.6	1	1	0	1	1	1	0	Translation	initiation	factor	IF-2,	N-terminal	region
Sigma70_r4	PF04545.11	gi|15920343|ref|NP_376012.1|	-	0.071	12.4	0.2	0.29	10.4	0.1	2.1	1	1	1	2	2	2	0	Sigma-70,	region	4
GntR	PF00392.16	gi|15920343|ref|NP_376012.1|	-	0.078	12.4	0.1	0.15	11.4	0.1	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
HTH_26	PF13443.1	gi|15920343|ref|NP_376012.1|	-	0.092	12.9	0.1	0.23	11.7	0.1	1.7	1	0	0	1	1	1	0	Cro/C1-type	HTH	DNA-binding	domain
HTH_27	PF13463.1	gi|15920343|ref|NP_376012.1|	-	0.11	12.8	0.1	0.34	11.2	0.1	1.9	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_29	PF13551.1	gi|15920343|ref|NP_376012.1|	-	0.11	12.5	0.0	0.18	11.9	0.0	1.3	1	0	0	1	1	1	0	Winged	helix-turn	helix
HTH_AsnC-type	PF13404.1	gi|15920343|ref|NP_376012.1|	-	0.14	11.7	0.3	0.4	10.2	0.2	1.8	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
ENT	PF03735.9	gi|15920343|ref|NP_376012.1|	-	0.19	11.4	1.2	1.5	8.6	0.8	2.2	1	1	0	1	1	1	0	ENT	domain
Aminotran_1_2	PF00155.16	gi|15920344|ref|NP_376013.1|	-	2.4e-13	49.7	0.0	4.5e-11	42.3	0.0	2.4	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Ribosomal_L38e	PF01781.13	gi|15920344|ref|NP_376013.1|	-	0.084	12.6	0.7	13	5.6	0.5	2.4	2	0	0	2	2	2	0	Ribosomal	L38e	protein	family
GtrA	PF04138.9	gi|15920345|ref|NP_376014.1|	-	1.8e-21	76.2	16.7	3e-21	75.5	11.6	1.3	1	1	0	1	1	1	1	GtrA-like	protein
tRNA_SAD	PF07973.9	gi|15920346|ref|NP_376015.1|	-	2.3e-11	43.3	0.5	4.1e-11	42.5	0.1	1.6	2	0	0	2	2	2	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
tRNA-synt_2c	PF01411.14	gi|15920346|ref|NP_376015.1|	-	3.1e-10	38.9	0.1	4e-10	38.6	0.1	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(A)
Snf7	PF03357.16	gi|15920347|ref|NP_376016.1|	-	0.00024	20.5	0.3	0.00036	19.9	0.2	1.4	1	0	0	1	1	1	1	Snf7
LOH1CR12	PF10158.4	gi|15920347|ref|NP_376016.1|	-	0.019	14.7	1.3	0.041	13.6	0.8	1.6	1	1	0	1	1	1	0	Tumour	suppressor	protein
Pox_F11	PF04943.7	gi|15920347|ref|NP_376016.1|	-	0.024	13.4	0.1	0.029	13.2	0.1	1.3	1	0	0	1	1	1	0	Poxvirus	F11	protein
DUF3958	PF13125.1	gi|15920347|ref|NP_376016.1|	-	0.082	12.8	0.3	0.14	12.0	0.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3958)
tRNA-synt_1b	PF00579.20	gi|161751105|ref|NP_376017.2|	-	5.9e-26	91.2	0.0	9.6e-26	90.5	0.0	1.3	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(W	and	Y)
HTH_38	PF13936.1	gi|15920349|ref|NP_376018.1|	-	2.2e-21	75.1	7.4	6.1e-08	32.0	0.4	3.3	3	0	0	3	3	3	3	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|15920349|ref|NP_376018.1|	-	1.5e-19	68.9	0.5	3.9e-06	26.3	0.0	3.1	3	0	0	3	3	3	3	Homeodomain-like	domain
HTH_7	PF02796.10	gi|15920349|ref|NP_376018.1|	-	1.8e-16	59.7	8.3	5.9e-05	22.8	0.5	3.2	3	0	0	3	3	3	3	Helix-turn-helix	domain	of	resolvase
HTH_28	PF13518.1	gi|15920349|ref|NP_376018.1|	-	2.2e-14	53.1	2.5	0.0017	18.2	0.0	3.2	3	0	0	3	3	3	3	Helix-turn-helix	domain
Terminase_5	PF06056.7	gi|15920349|ref|NP_376018.1|	-	1.3e-12	47.0	1.9	0.001	18.5	0.0	3.1	3	0	0	3	3	3	3	Putative	ATPase	subunit	of	terminase	(gpP-like)
Sigma70_r4_2	PF08281.7	gi|15920349|ref|NP_376018.1|	-	7.1e-11	41.3	2.2	0.0019	17.6	0.0	3.6	3	1	1	4	4	4	3	Sigma-70,	region	4
Recombinase	PF07508.8	gi|15920349|ref|NP_376018.1|	-	4.9e-09	36.3	4.7	0.03	14.5	0.1	3.5	3	1	0	3	3	3	3	Recombinase
HTH_40	PF14493.1	gi|15920349|ref|NP_376018.1|	-	7.7e-09	35.6	1.6	0.0086	16.2	0.1	3.3	1	1	2	3	3	3	3	Helix-turn-helix	domain
HTH_29	PF13551.1	gi|15920349|ref|NP_376018.1|	-	1.2e-08	35.0	0.3	0.093	12.8	0.0	3.1	3	0	0	3	3	3	2	Winged	helix-turn	helix
IF2_N	PF04760.10	gi|15920349|ref|NP_376018.1|	-	1.8e-08	33.8	10.5	0.0016	18.0	0.1	4.2	2	1	1	3	3	3	3	Translation	initiation	factor	IF-2,	N-terminal	region
GerE	PF00196.14	gi|15920349|ref|NP_376018.1|	-	2.2e-08	33.2	3.4	0.033	13.5	0.1	3.3	3	0	0	3	3	3	3	Bacterial	regulatory	proteins,	luxR	family
HTH_Tnp_1	PF01527.15	gi|15920349|ref|NP_376018.1|	-	2.4e-08	33.8	0.3	0.071	13.0	0.0	3.1	3	0	0	3	3	3	2	Transposase
HTH_24	PF13412.1	gi|15920349|ref|NP_376018.1|	-	4.5e-08	32.3	5.2	0.014	14.7	0.0	4.1	4	1	0	4	4	4	2	Winged	helix-turn-helix	DNA-binding
Sigma70_r4	PF04545.11	gi|15920349|ref|NP_376018.1|	-	2.1e-07	30.1	4.7	0.00016	20.9	0.1	3.5	3	1	0	3	3	3	1	Sigma-70,	region	4
HTH_Tnp_Tc3_1	PF11427.3	gi|15920349|ref|NP_376018.1|	-	5.4e-07	29.1	3.7	2.8e-06	26.8	0.2	2.7	2	1	0	3	3	2	1	Tc3	transposase
HTH_Tnp_ISL3	PF13542.1	gi|15920349|ref|NP_376018.1|	-	4.2e-06	25.8	0.0	0.027	13.6	0.0	2.9	3	0	0	3	3	3	2	Helix-turn-helix	domain	of	transposase	family	ISL3
MerR_1	PF13411.1	gi|15920349|ref|NP_376018.1|	-	5e-06	26.1	4.1	0.064	13.0	0.0	3.6	3	1	0	3	3	3	1	MerR	HTH	family	regulatory	protein
HTH_11	PF08279.7	gi|15920349|ref|NP_376018.1|	-	7.5e-06	25.4	2.5	0.22	11.2	0.1	3.2	3	0	0	3	3	3	2	HTH	domain
Sigma70_ECF	PF07638.6	gi|15920349|ref|NP_376018.1|	-	1e-05	25.3	1.1	0.73	9.4	0.0	3.0	1	1	2	3	3	3	1	ECF	sigma	factor
TrmB	PF01978.14	gi|15920349|ref|NP_376018.1|	-	1.5e-05	24.5	2.9	0.18	11.5	0.1	3.4	2	1	1	3	3	3	1	Sugar-specific	transcriptional	regulator	TrmB
DUF1699	PF08004.6	gi|15920349|ref|NP_376018.1|	-	4e-05	23.1	7.5	0.85	9.1	0.4	3.1	1	1	2	3	3	3	3	Protein	of	unknown	function	(DUF1699)
DUF3791	PF12668.2	gi|15920349|ref|NP_376018.1|	-	4.4e-05	23.0	5.3	1.2	8.7	0.1	3.7	2	1	1	4	4	4	1	Protein	of	unknown	function	(DUF3791)
DUF2316	PF10078.4	gi|15920349|ref|NP_376018.1|	-	5.3e-05	23.1	0.2	0.26	11.2	0.0	3.1	1	1	2	3	3	3	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2316)
NUMOD1	PF07453.8	gi|15920349|ref|NP_376018.1|	-	6.4e-05	22.6	5.1	0.027	14.3	0.2	3.3	3	0	0	3	3	3	1	NUMOD1	domain
PAX	PF00292.13	gi|15920349|ref|NP_376018.1|	-	7.1e-05	22.5	0.3	0.015	15.0	0.1	2.9	1	1	1	2	2	2	1	'Paired	box'	domain
GcrA	PF07750.6	gi|15920349|ref|NP_376018.1|	-	8.2e-05	22.8	0.6	0.32	11.1	0.1	2.9	1	1	2	3	3	3	1	GcrA	cell	cycle	regulator
ANT	PF03374.9	gi|15920349|ref|NP_376018.1|	-	9.8e-05	22.3	1.0	0.48	10.4	0.0	3.0	1	1	2	3	3	3	1	Phage	antirepressor	protein	KilAC	domain
CPSase_L_D3	PF02787.14	gi|15920349|ref|NP_376018.1|	-	0.00045	19.9	2.9	0.017	14.9	0.6	2.7	1	1	1	2	2	2	1	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
HTH_10	PF04967.7	gi|15920349|ref|NP_376018.1|	-	0.00047	19.6	0.2	3.4	7.3	0.0	3.4	3	0	0	3	3	3	0	HTH	DNA	binding	domain
Ribosomal_S13_N	PF08069.7	gi|15920349|ref|NP_376018.1|	-	0.00061	19.5	4.5	0.22	11.3	0.0	3.4	3	0	0	3	3	3	1	Ribosomal	S13/S15	N-terminal	domain
Sigma70_r3	PF04539.11	gi|15920349|ref|NP_376018.1|	-	0.00072	19.3	0.9	0.057	13.2	0.0	3.3	3	1	1	4	4	3	1	Sigma-70	region	3
CENP-B_N	PF04218.8	gi|15920349|ref|NP_376018.1|	-	0.00073	18.9	5.6	0.38	10.1	0.1	3.3	3	0	0	3	3	3	1	CENP-B	N-terminal	DNA-binding	domain
HTH_Tnp_IS630	PF01710.11	gi|15920349|ref|NP_376018.1|	-	0.00083	19.0	5.2	0.0017	18.0	1.8	2.1	1	1	1	2	2	2	1	Transposase
RPA_C	PF08784.6	gi|15920349|ref|NP_376018.1|	-	0.001	19.4	0.5	2.1	8.8	0.0	3.2	1	1	1	2	2	2	0	Replication	protein	A	C	terminal
DUF433	PF04255.9	gi|15920349|ref|NP_376018.1|	-	0.0017	17.7	0.0	12	5.4	0.0	3.6	3	1	0	4	4	4	0	Protein	of	unknown	function	(DUF433)
Phage_antitermQ	PF06530.7	gi|15920349|ref|NP_376018.1|	-	0.0025	17.3	5.6	0.71	9.4	0.5	2.9	1	1	2	3	3	3	1	Phage	antitermination	protein	Q
HTH_3	PF01381.17	gi|15920349|ref|NP_376018.1|	-	0.0032	17.2	3.6	6.5	6.6	0.0	3.6	2	1	2	4	4	4	0	Helix-turn-helix
DUF2482	PF10655.4	gi|15920349|ref|NP_376018.1|	-	0.0035	17.3	0.9	0.01	15.8	0.1	1.9	2	1	0	2	2	2	1	Hypothetical	protein	of	unknown	function	(DUF2482)
HTH_Tnp_IS1	PF12759.2	gi|15920349|ref|NP_376018.1|	-	0.0057	16.0	0.1	0.97	8.9	0.0	2.8	3	0	0	3	3	3	1	InsA	C-terminal	domain
DUF1670	PF07900.6	gi|15920349|ref|NP_376018.1|	-	0.0069	15.6	8.3	0.32	10.1	0.4	3.0	1	1	2	3	3	3	2	Protein	of	unknown	function	(DUF1670)
HTH_5	PF01022.15	gi|15920349|ref|NP_376018.1|	-	0.0072	15.9	0.0	15	5.3	0.0	3.3	3	0	0	3	3	3	0	Bacterial	regulatory	protein,	arsR	family
MarR	PF01047.17	gi|15920349|ref|NP_376018.1|	-	0.0097	15.5	0.5	13	5.6	0.1	3.6	2	1	1	3	3	3	0	MarR	family
Phage_terminase	PF10668.4	gi|15920349|ref|NP_376018.1|	-	0.0099	15.6	1.6	8.4	6.2	0.1	3.2	2	1	0	3	3	3	0	Phage	terminase	small	subunit
FumaraseC_C	PF10415.4	gi|15920349|ref|NP_376018.1|	-	0.011	15.7	0.3	31	4.7	0.0	3.5	2	2	1	3	3	3	0	Fumarase	C	C-terminus
AF0941-like	PF14591.1	gi|15920349|ref|NP_376018.1|	-	0.015	15.3	7.1	0.12	12.4	2.4	2.3	1	1	1	2	2	2	0	AF0941-like
3A	PF00803.13	gi|15920349|ref|NP_376018.1|	-	0.017	14.2	0.3	0.029	13.4	0.1	1.4	1	1	0	1	1	1	0	3A/RNA2	movement	protein	family
Herpes_IE2_3	PF03361.9	gi|15920349|ref|NP_376018.1|	-	0.025	13.8	2.3	0.065	12.5	0.1	2.0	1	1	1	2	2	2	0	Herpes	virus	intermediate/early	protein	2/3
SurA_N	PF09312.6	gi|15920349|ref|NP_376018.1|	-	0.026	14.3	0.7	0.08	12.8	0.1	2.1	2	1	0	2	2	2	0	SurA	N-terminal	domain
Trp_repressor	PF01371.14	gi|15920349|ref|NP_376018.1|	-	0.032	14.1	4.9	5.9	6.8	0.2	3.3	1	1	2	3	3	3	0	Trp	repressor	protein
Oxidored_FMN	PF00724.15	gi|15920349|ref|NP_376018.1|	-	0.032	13.2	0.1	0.041	12.8	0.0	1.2	1	0	0	1	1	1	0	NADH:flavin	oxidoreductase	/	NADH	oxidase	family
RepB	PF07506.6	gi|15920349|ref|NP_376018.1|	-	0.042	13.7	0.1	0.36	10.6	0.1	2.1	1	1	1	2	2	2	0	RepB	plasmid	partitioning	protein
HTH_21	PF13276.1	gi|15920349|ref|NP_376018.1|	-	0.048	13.6	8.0	0.3	11.1	3.2	3.4	2	2	0	2	2	1	0	HTH-like	domain
BtpA	PF03437.10	gi|15920349|ref|NP_376018.1|	-	0.063	12.5	0.9	0.087	12.0	0.1	1.5	2	0	0	2	2	2	0	BtpA	family
TetR_N	PF00440.18	gi|15920349|ref|NP_376018.1|	-	0.064	12.9	0.0	5.4	6.7	0.0	2.8	3	0	0	3	3	2	0	Bacterial	regulatory	proteins,	tetR	family
HTH_Tnp_Tc3_2	PF01498.13	gi|15920349|ref|NP_376018.1|	-	0.065	13.3	1.9	1.2	9.2	0.1	2.9	2	1	1	3	3	2	0	Transposase
KorB	PF08535.5	gi|15920349|ref|NP_376018.1|	-	0.065	13.3	0.3	5.8	7.1	0.0	2.8	2	1	1	3	3	2	0	KorB	domain
HTH_AsnC-type	PF13404.1	gi|15920349|ref|NP_376018.1|	-	0.077	12.5	0.0	7.4	6.2	0.0	3.1	4	0	0	4	4	3	0	AsnC-type	helix-turn-helix	domain
HTH_9	PF08221.6	gi|15920349|ref|NP_376018.1|	-	0.094	12.6	0.1	1.3	8.9	0.0	2.5	2	1	0	2	2	2	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
Homeobox	PF00046.24	gi|15920349|ref|NP_376018.1|	-	0.12	12.0	0.1	22	4.7	0.0	3.3	3	1	0	3	3	3	0	Homeobox	domain
Ret_tiss	PF10044.4	gi|15920349|ref|NP_376018.1|	-	0.12	12.9	3.4	0.32	11.5	0.2	2.5	2	1	1	3	3	2	0	Retinal	tissue	protein
SpoIIID	PF12116.3	gi|15920349|ref|NP_376018.1|	-	0.14	12.1	5.5	0.33	10.8	0.3	2.4	1	1	1	2	2	2	0	Stage	III	sporulation	protein	D
DUF2570	PF10828.3	gi|15920349|ref|NP_376018.1|	-	0.19	11.3	5.6	4.1	7.0	1.1	2.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2570)
DUF1910	PF08928.5	gi|15920349|ref|NP_376018.1|	-	0.21	11.6	4.6	0.13	12.2	1.3	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF1910)
HTH_26	PF13443.1	gi|15920349|ref|NP_376018.1|	-	0.21	11.7	2.9	8.6	6.6	0.2	2.9	2	1	1	3	3	2	0	Cro/C1-type	HTH	DNA-binding	domain
Duffy_binding	PF05424.6	gi|15920349|ref|NP_376018.1|	-	0.25	11.1	2.2	4.7	7.0	0.4	2.1	1	1	1	2	2	2	0	Duffy	binding	domain
GatB_Yqey	PF02637.13	gi|15920349|ref|NP_376018.1|	-	0.27	10.9	5.0	3	7.5	0.7	2.3	1	1	2	3	3	3	0	GatB	domain
HrcA_DNA-bdg	PF03444.10	gi|15920349|ref|NP_376018.1|	-	0.27	10.6	9.1	0.15	11.5	0.3	3.1	2	1	0	3	3	3	0	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
HTH_17	PF12728.2	gi|15920349|ref|NP_376018.1|	-	0.3	11.3	1.9	6.9	7.0	0.1	2.9	2	1	1	3	3	2	0	Helix-turn-helix	domain
DUF1492	PF07374.6	gi|15920349|ref|NP_376018.1|	-	0.3	11.2	6.9	0.76	9.9	4.1	2.2	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1492)
HTH_36	PF13730.1	gi|15920349|ref|NP_376018.1|	-	0.42	10.7	2.9	25	5.0	0.3	3.0	3	0	0	3	3	3	0	Helix-turn-helix	domain
Cpn60_TCP1	PF00118.19	gi|15920349|ref|NP_376018.1|	-	0.43	9.1	5.8	0.49	8.9	1.6	1.9	1	1	1	2	2	2	0	TCP-1/cpn60	chaperonin	family
HTH_19	PF12844.2	gi|15920349|ref|NP_376018.1|	-	0.47	10.5	7.2	22	5.2	0.4	3.6	1	1	1	2	2	2	0	Helix-turn-helix	domain
DUF2089	PF09862.4	gi|15920349|ref|NP_376018.1|	-	0.52	10.1	5.0	1.2	8.9	0.7	2.5	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF2089)
DUF4373	PF14297.1	gi|15920349|ref|NP_376018.1|	-	0.53	10.6	2.7	31	4.9	0.1	3.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4373)
RepA_N	PF06970.6	gi|15920349|ref|NP_376018.1|	-	0.92	9.3	4.7	18	5.1	0.1	3.0	3	1	0	3	3	3	0	Replication	initiator	protein	A	(RepA)	N-terminus
LysE	PF01810.13	gi|15920350|ref|NP_376019.1|	-	1.5e-23	83.0	18.2	2.4e-23	82.4	12.6	1.3	1	1	0	1	1	1	1	LysE	type	translocator
DUF4014	PF13198.1	gi|15920350|ref|NP_376019.1|	-	0.91	9.9	3.8	0.77	10.2	1.5	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4014)
5-FTHF_cyc-lig	PF01812.15	gi|15920351|ref|NP_376020.1|	-	1.3e-31	109.7	0.0	1.6e-31	109.5	0.0	1.1	1	0	0	1	1	1	1	5-formyltetrahydrofolate	cyclo-ligase	family
TrmB	PF01978.14	gi|15920352|ref|NP_376021.1|	-	2.5e-15	55.9	0.2	3.6e-15	55.4	0.1	1.3	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|15920352|ref|NP_376021.1|	-	8.4e-09	34.9	0.0	1.4e-08	34.2	0.0	1.3	1	0	0	1	1	1	1	MarR	family
TFIIE_alpha	PF02002.12	gi|15920352|ref|NP_376021.1|	-	4.7e-07	29.2	0.2	5.6e-07	29.0	0.2	1.1	1	0	0	1	1	1	1	TFIIE	alpha	subunit
MarR	PF01047.17	gi|15920352|ref|NP_376021.1|	-	4.1e-06	26.4	0.1	7.7e-06	25.5	0.1	1.5	1	0	0	1	1	1	1	MarR	family
Fe_dep_repress	PF01325.14	gi|15920352|ref|NP_376021.1|	-	4.5e-05	23.3	0.1	6.9e-05	22.7	0.1	1.3	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_20	PF12840.2	gi|15920352|ref|NP_376021.1|	-	5.1e-05	22.9	0.0	0.00011	21.9	0.0	1.6	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|15920352|ref|NP_376021.1|	-	7.1e-05	22.1	0.2	0.00013	21.2	0.1	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_5	PF01022.15	gi|15920352|ref|NP_376021.1|	-	0.00016	21.2	1.1	0.00053	19.6	0.1	2.2	2	1	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_27	PF13463.1	gi|15920352|ref|NP_376021.1|	-	0.00019	21.6	0.0	0.0004	20.6	0.0	1.6	2	0	0	2	2	1	1	Winged	helix	DNA-binding	domain
DUF4423	PF14394.1	gi|15920352|ref|NP_376021.1|	-	0.00039	20.0	0.1	0.00066	19.2	0.0	1.4	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
HTH_Crp_2	PF13545.1	gi|15920352|ref|NP_376021.1|	-	0.00054	19.6	0.0	0.0055	16.4	0.0	2.1	2	0	0	2	2	2	1	Crp-like	helix-turn-helix	domain
DUF2250	PF10007.4	gi|15920352|ref|NP_376021.1|	-	0.0011	18.8	0.4	0.002	18.0	0.1	1.6	1	1	1	2	2	2	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_34	PF13601.1	gi|15920352|ref|NP_376021.1|	-	0.0012	18.8	0.8	0.0044	17.0	0.5	2.0	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
RPA_C	PF08784.6	gi|15920352|ref|NP_376021.1|	-	0.0015	18.9	0.1	0.0079	16.5	0.0	1.9	2	0	0	2	2	2	1	Replication	protein	A	C	terminal
Rrf2	PF02082.15	gi|15920352|ref|NP_376021.1|	-	0.0017	18.4	0.1	0.0026	17.8	0.1	1.3	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_36	PF13730.1	gi|15920352|ref|NP_376021.1|	-	0.0092	16.0	0.9	0.023	14.8	0.2	2.0	2	1	0	2	2	2	1	Helix-turn-helix	domain
PadR	PF03551.9	gi|15920352|ref|NP_376021.1|	-	0.0093	15.7	0.1	0.014	15.1	0.0	1.5	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_23	PF13384.1	gi|15920352|ref|NP_376021.1|	-	0.011	15.3	0.0	0.02	14.5	0.0	1.5	1	1	0	1	1	1	0	Homeodomain-like	domain
HTH_CodY	PF08222.6	gi|15920352|ref|NP_376021.1|	-	0.027	13.7	0.1	0.045	13.0	0.0	1.5	1	0	0	1	1	1	0	CodY	helix-turn-helix	domain
EAP30	PF04157.11	gi|15920352|ref|NP_376021.1|	-	0.035	13.2	0.3	0.2	10.8	0.0	1.9	2	0	0	2	2	2	0	EAP30/Vps36	family
Sigma70_r4	PF04545.11	gi|15920352|ref|NP_376021.1|	-	0.039	13.2	0.0	0.081	12.2	0.0	1.6	1	1	0	1	1	1	0	Sigma-70,	region	4
tRNA-synt_His	PF13393.1	gi|15920352|ref|NP_376021.1|	-	0.069	12.1	0.2	0.092	11.7	0.0	1.3	2	0	0	2	2	2	0	Histidyl-tRNA	synthetase
Cdc6_C	PF09079.6	gi|15920352|ref|NP_376021.1|	-	0.069	12.8	0.1	0.16	11.7	0.0	1.7	1	1	0	1	1	1	0	CDC6,	C	terminal
ArsR	PF09824.4	gi|15920352|ref|NP_376021.1|	-	0.083	12.2	0.1	0.1	11.9	0.1	1.2	1	0	0	1	1	1	0	ArsR	transcriptional	regulator
DUF2513	PF10711.4	gi|15920352|ref|NP_376021.1|	-	0.1	12.6	0.1	0.13	12.3	0.1	1.3	1	0	0	1	1	1	0	Hypothetical	protein	(DUF2513)
HTH_29	PF13551.1	gi|15920352|ref|NP_376021.1|	-	0.12	12.5	0.0	0.14	12.2	0.0	1.3	1	0	0	1	1	1	0	Winged	helix-turn	helix
HTH_10	PF04967.7	gi|15920352|ref|NP_376021.1|	-	0.13	11.8	0.5	0.95	9.0	0.1	2.1	1	1	1	2	2	2	0	HTH	DNA	binding	domain
B-block_TFIIIC	PF04182.7	gi|15920352|ref|NP_376021.1|	-	0.14	12.0	0.1	0.24	11.2	0.1	1.5	1	1	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
HTH_45	PF14947.1	gi|15920352|ref|NP_376021.1|	-	0.14	11.9	1.7	0.2	11.4	0.1	1.9	2	0	0	2	2	2	0	Winged	helix-turn-helix
ParA	PF10609.4	gi|15920353|ref|NP_376022.1|	-	5.2e-31	106.3	0.1	3.1e-30	103.8	0.0	2.3	2	0	0	2	2	2	1	ParA/MinD	ATPase	like
CbiA	PF01656.18	gi|15920353|ref|NP_376022.1|	-	2e-17	63.2	0.2	3.8e-17	62.3	0.1	1.4	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Fer4_NifH	PF00142.13	gi|15920353|ref|NP_376022.1|	-	5.6e-08	32.3	0.0	0.00017	20.8	0.0	2.3	2	0	0	2	2	2	2	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
AAA_31	PF13614.1	gi|15920353|ref|NP_376022.1|	-	1.4e-07	31.5	0.0	4.6e-06	26.6	0.0	2.5	3	0	0	3	3	3	1	AAA	domain
AAA_10	PF12846.2	gi|15920353|ref|NP_376022.1|	-	7.9e-06	25.5	0.1	9.6e-06	25.2	0.1	1.2	1	0	0	1	1	1	1	AAA-like	domain
MipZ	PF09140.6	gi|15920353|ref|NP_376022.1|	-	1e-05	24.7	0.0	1.8e-05	23.9	0.0	1.5	1	1	0	1	1	1	1	ATPase	MipZ
ArsA_ATPase	PF02374.10	gi|15920353|ref|NP_376022.1|	-	1.6e-05	24.1	1.2	7.7e-05	21.8	0.5	2.0	2	0	0	2	2	2	1	Anion-transporting	ATPase
AAA_26	PF13500.1	gi|15920353|ref|NP_376022.1|	-	0.00024	20.7	0.1	0.3	10.6	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
ArgK	PF03308.11	gi|15920353|ref|NP_376022.1|	-	0.00059	18.6	0.2	0.00098	17.9	0.2	1.2	1	0	0	1	1	1	1	ArgK	protein
AAA_25	PF13481.1	gi|15920353|ref|NP_376022.1|	-	0.0025	17.2	0.0	0.0062	15.9	0.1	1.6	2	0	0	2	2	2	1	AAA	domain
AAA_19	PF13245.1	gi|15920353|ref|NP_376022.1|	-	0.036	13.8	0.1	0.31	10.8	0.0	2.1	2	0	0	2	2	2	0	Part	of	AAA	domain
DUF258	PF03193.11	gi|15920353|ref|NP_376022.1|	-	0.057	12.5	0.1	0.092	11.9	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
IstB_IS21	PF01695.12	gi|15920353|ref|NP_376022.1|	-	0.059	12.7	0.9	0.17	11.2	0.4	1.8	2	1	0	2	2	2	0	IstB-like	ATP	binding	protein
L31	PF09784.4	gi|15920353|ref|NP_376022.1|	-	0.066	13.2	0.3	0.12	12.4	0.2	1.4	1	0	0	1	1	1	0	Mitochondrial	ribosomal	protein	L31
AAA_18	PF13238.1	gi|15920354|ref|NP_376023.1|	-	7e-20	71.6	1.1	7.8e-20	71.4	0.1	1.5	2	0	0	2	2	1	1	AAA	domain
AAA_17	PF13207.1	gi|15920354|ref|NP_376023.1|	-	9.8e-14	52.2	0.2	1.3e-13	51.8	0.1	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_5	PF07728.9	gi|15920354|ref|NP_376023.1|	-	9.3e-07	28.6	0.0	2e-06	27.5	0.0	1.5	2	0	0	2	2	1	1	AAA	domain	(dynein-related	subfamily)
SKI	PF01202.17	gi|15920354|ref|NP_376023.1|	-	6.5e-05	22.8	0.0	0.00011	22.0	0.0	1.4	1	0	0	1	1	1	1	Shikimate	kinase
DUF2075	PF09848.4	gi|15920354|ref|NP_376023.1|	-	7.7e-05	21.8	0.0	0.00011	21.3	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
NTPase_1	PF03266.10	gi|15920354|ref|NP_376023.1|	-	0.00015	21.5	1.3	0.00052	19.7	0.1	2.2	1	1	0	2	2	2	1	NTPase
AAA	PF00004.24	gi|15920354|ref|NP_376023.1|	-	0.00016	21.8	0.0	0.00068	19.8	0.0	2.0	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
KTI12	PF08433.5	gi|15920354|ref|NP_376023.1|	-	0.00018	20.8	0.0	0.00027	20.2	0.0	1.4	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
Baculo_helicase	PF04735.7	gi|15920354|ref|NP_376023.1|	-	0.00031	18.2	0.2	0.00042	17.8	0.1	1.1	1	0	0	1	1	1	1	Baculovirus	DNA	helicase
AAA_14	PF13173.1	gi|15920354|ref|NP_376023.1|	-	0.00034	20.5	1.1	0.0028	17.5	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_28	PF13521.1	gi|15920354|ref|NP_376023.1|	-	0.00063	19.7	0.1	0.0012	18.8	0.1	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|15920354|ref|NP_376023.1|	-	0.00083	19.2	0.0	0.0016	18.3	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
ArgK	PF03308.11	gi|15920354|ref|NP_376023.1|	-	0.0012	17.6	0.2	0.0025	16.6	0.0	1.6	2	0	0	2	2	2	1	ArgK	protein
Rad17	PF03215.10	gi|15920354|ref|NP_376023.1|	-	0.0014	17.4	0.0	0.0017	17.1	0.0	1.2	1	0	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
AAA_29	PF13555.1	gi|15920354|ref|NP_376023.1|	-	0.0014	18.1	0.4	0.0025	17.2	0.3	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
Cytidylate_kin2	PF13189.1	gi|15920354|ref|NP_376023.1|	-	0.0023	17.8	0.2	0.0044	16.9	0.1	1.6	1	1	0	1	1	1	1	Cytidylate	kinase-like	family
PRK	PF00485.13	gi|15920354|ref|NP_376023.1|	-	0.0028	17.2	0.0	0.0045	16.5	0.0	1.4	1	0	0	1	1	1	1	Phosphoribulokinase	/	Uridine	kinase	family
AAA_16	PF13191.1	gi|15920354|ref|NP_376023.1|	-	0.0047	16.9	0.7	0.0077	16.2	0.5	1.8	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|15920354|ref|NP_376023.1|	-	0.0054	16.8	0.4	0.022	14.8	0.3	2.1	1	1	0	1	1	1	1	AAA	domain
ABC_tran	PF00005.22	gi|15920354|ref|NP_376023.1|	-	0.0061	16.8	0.2	0.0084	16.4	0.1	1.6	1	1	0	1	1	1	1	ABC	transporter
Viral_helicase1	PF01443.13	gi|15920354|ref|NP_376023.1|	-	0.0091	15.5	0.0	0.013	15.0	0.0	1.3	1	0	0	1	1	1	1	Viral	(Superfamily	1)	RNA	helicase
RNA_helicase	PF00910.17	gi|15920354|ref|NP_376023.1|	-	0.0095	16.1	0.0	0.02	15.0	0.0	1.6	1	0	0	1	1	1	1	RNA	helicase
APS_kinase	PF01583.15	gi|15920354|ref|NP_376023.1|	-	0.01	15.5	0.0	0.021	14.5	0.0	1.6	2	0	0	2	2	1	0	Adenylylsulphate	kinase
AAA_19	PF13245.1	gi|15920354|ref|NP_376023.1|	-	0.014	15.0	0.0	0.023	14.4	0.0	1.4	1	0	0	1	1	1	0	Part	of	AAA	domain
Polysacc_syn_2C	PF08485.5	gi|15920354|ref|NP_376023.1|	-	0.029	13.8	0.1	0.05	13.1	0.0	1.4	1	0	0	1	1	1	0	Polysaccharide	biosynthesis	protein	C-terminal
MMR_HSR1	PF01926.18	gi|15920354|ref|NP_376023.1|	-	0.031	14.2	0.1	0.043	13.7	0.1	1.6	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
SMC_N	PF02463.14	gi|15920354|ref|NP_376023.1|	-	0.034	13.3	0.1	0.062	12.5	0.1	1.5	1	1	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
Zeta_toxin	PF06414.7	gi|15920354|ref|NP_376023.1|	-	0.037	13.1	0.0	0.057	12.5	0.0	1.4	1	1	0	1	1	1	0	Zeta	toxin
Thymidylate_kin	PF02223.12	gi|15920354|ref|NP_376023.1|	-	0.039	13.3	0.2	1.3	8.3	0.0	2.1	1	1	1	2	2	2	0	Thymidylate	kinase
KaiC	PF06745.8	gi|15920354|ref|NP_376023.1|	-	0.05	12.7	3.8	1.8	7.6	0.1	2.3	1	1	0	2	2	2	0	KaiC
Imm3	PF14425.1	gi|15920354|ref|NP_376023.1|	-	0.051	13.5	2.9	1.7	8.6	0.2	2.3	2	0	0	2	2	2	0	Immunity	protein	Imm3
ADK	PF00406.17	gi|15920354|ref|NP_376023.1|	-	0.076	12.8	0.1	0.13	12.1	0.0	1.8	1	1	0	1	1	1	0	Adenylate	kinase
AAA_10	PF12846.2	gi|15920354|ref|NP_376023.1|	-	0.084	12.3	0.2	0.13	11.7	0.1	1.8	1	1	0	1	1	1	0	AAA-like	domain
Herpes_Helicase	PF02689.9	gi|15920354|ref|NP_376023.1|	-	0.084	10.6	0.2	0.34	8.6	0.1	1.9	3	0	0	3	3	3	0	Helicase
T2SE	PF00437.15	gi|15920354|ref|NP_376023.1|	-	0.089	11.6	0.7	0.16	10.8	0.3	1.6	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
CPT	PF07931.7	gi|15920354|ref|NP_376023.1|	-	0.097	12.2	0.0	0.15	11.7	0.0	1.4	1	0	0	1	1	1	0	Chloramphenicol	phosphotransferase-like	protein
NACHT	PF05729.7	gi|15920354|ref|NP_376023.1|	-	0.099	12.2	0.1	0.15	11.6	0.1	1.5	1	1	0	1	1	1	0	NACHT	domain
FtsK_SpoIIIE	PF01580.13	gi|15920354|ref|NP_376023.1|	-	0.1	12.0	0.4	0.26	10.7	0.2	1.6	1	1	1	2	2	2	0	FtsK/SpoIIIE	family
MobB	PF03205.9	gi|15920354|ref|NP_376023.1|	-	0.12	12.0	0.4	0.25	11.0	0.3	1.8	1	1	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
DUF258	PF03193.11	gi|15920354|ref|NP_376023.1|	-	0.12	11.5	0.0	0.18	10.9	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
cobW	PF02492.14	gi|15920354|ref|NP_376023.1|	-	1.1	8.6	5.4	0.31	10.4	0.3	2.3	2	1	1	3	3	3	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_23	PF13476.1	gi|15920354|ref|NP_376023.1|	-	1.6	8.9	7.1	5.4	7.2	4.9	2.0	1	1	0	1	1	1	0	AAA	domain
Rhomboid	PF01694.17	gi|15920355|ref|NP_376024.1|	-	1.7e-20	73.5	10.5	1.7e-20	73.5	7.3	1.7	2	0	0	2	2	2	1	Rhomboid	family
Peptidase_M50	PF02163.17	gi|15920356|ref|NP_376025.1|	-	6.4e-12	44.8	8.6	8.6e-12	44.4	6.0	1.2	1	1	0	1	1	1	1	Peptidase	family	M50
ACT_7	PF13840.1	gi|15920357|ref|NP_376026.1|	-	0.035	13.6	0.0	0.069	12.6	0.0	1.5	1	0	0	1	1	1	0	ACT	domain
Aldolase_2	PF10120.4	gi|15920358|ref|NP_376027.1|	-	1.7e-48	164.1	0.0	2.4e-48	163.7	0.0	1.2	1	0	0	1	1	1	1	Putative	aldolase
HTH_37	PF13744.1	gi|15920358|ref|NP_376027.1|	-	0.00079	19.1	0.0	0.0017	18.1	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
DUF4099	PF13351.1	gi|15920358|ref|NP_376027.1|	-	0.013	15.3	0.1	0.027	14.3	0.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4099)
HTH_23	PF13384.1	gi|15920358|ref|NP_376027.1|	-	0.043	13.4	0.0	0.12	12.0	0.0	1.7	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_38	PF13936.1	gi|15920358|ref|NP_376027.1|	-	0.044	13.3	0.8	0.18	11.3	0.0	2.2	2	0	0	2	2	2	0	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|15920358|ref|NP_376027.1|	-	0.046	13.1	0.0	0.095	12.1	0.0	1.5	1	0	0	1	1	1	0	Sigma-70,	region	4
CPSase_L_D3	PF02787.14	gi|15920358|ref|NP_376027.1|	-	0.058	13.1	0.0	1.1	9.0	0.0	2.4	1	1	1	2	2	2	0	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
NurA	PF09376.5	gi|15920359|ref|NP_376028.1|	-	2.5e-14	53.3	0.4	5.4e-07	29.3	0.0	2.2	1	1	1	2	2	2	2	NurA	domain
DUF87	PF01935.12	gi|15920360|ref|NP_376029.1|	-	1.2e-19	71.0	4.0	1.9e-19	70.3	1.6	2.1	1	1	1	2	2	2	1	Domain	of	unknown	function	DUF87
AAA_10	PF12846.2	gi|15920360|ref|NP_376029.1|	-	3.7e-10	39.7	1.7	7.9e-10	38.6	1.2	1.6	1	1	0	1	1	1	1	AAA-like	domain
FtsK_SpoIIIE	PF01580.13	gi|15920360|ref|NP_376029.1|	-	7.2e-05	22.3	0.1	0.052	13.0	0.0	2.3	2	0	0	2	2	2	2	FtsK/SpoIIIE	family
PCMT	PF01135.14	gi|15920361|ref|NP_376030.1|	-	4.5e-40	137.4	0.0	5.2e-40	137.2	0.0	1.0	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_18	PF12847.2	gi|15920361|ref|NP_376030.1|	-	1e-10	42.1	0.0	1.6e-10	41.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|15920361|ref|NP_376030.1|	-	1.3e-08	34.2	0.0	1.9e-08	33.6	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_31	PF13847.1	gi|15920361|ref|NP_376030.1|	-	3.8e-07	29.8	0.1	5.4e-07	29.3	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|15920361|ref|NP_376030.1|	-	2.8e-05	24.5	0.0	6.8e-05	23.2	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|15920361|ref|NP_376030.1|	-	3.1e-05	23.9	0.0	3.8e-05	23.6	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|15920361|ref|NP_376030.1|	-	4e-05	22.8	0.0	5.6e-05	22.4	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
MTS	PF05175.9	gi|15920361|ref|NP_376030.1|	-	4.8e-05	22.8	0.0	6.6e-05	22.3	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
DOT1	PF08123.8	gi|15920361|ref|NP_376030.1|	-	0.00011	21.5	0.1	0.00016	21.0	0.1	1.2	1	0	0	1	1	1	1	Histone	methylation	protein	DOT1
Methyltransf_23	PF13489.1	gi|15920361|ref|NP_376030.1|	-	0.00019	21.2	0.0	0.00021	21.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Fibrillarin	PF01269.12	gi|15920361|ref|NP_376030.1|	-	0.0019	17.1	0.0	0.0028	16.6	0.0	1.2	1	0	0	1	1	1	1	Fibrillarin
GCD14	PF08704.5	gi|15920361|ref|NP_376030.1|	-	0.002	17.6	0.0	0.0027	17.2	0.0	1.2	1	0	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
Met_10	PF02475.11	gi|15920361|ref|NP_376030.1|	-	0.0022	17.6	0.0	0.0035	16.9	0.0	1.4	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_3	PF01596.12	gi|15920361|ref|NP_376030.1|	-	0.0025	16.8	0.0	0.0034	16.4	0.0	1.2	1	0	0	1	1	1	1	O-methyltransferase
Methyltransf_25	PF13649.1	gi|15920361|ref|NP_376030.1|	-	0.0032	17.8	0.0	0.0049	17.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|15920361|ref|NP_376030.1|	-	0.005	17.2	0.0	0.011	16.2	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.15	gi|15920361|ref|NP_376030.1|	-	0.038	13.0	0.0	0.057	12.4	0.0	1.2	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
Methyltransf_16	PF10294.4	gi|15920361|ref|NP_376030.1|	-	0.11	11.9	0.1	0.18	11.2	0.1	1.4	1	0	0	1	1	1	0	Putative	methyltransferase
Methyltransf_24	PF13578.1	gi|15920361|ref|NP_376030.1|	-	0.12	13.2	0.0	0.25	12.1	0.0	1.6	1	0	0	1	1	1	0	Methyltransferase	domain
TauE	PF01925.14	gi|15920362|ref|NP_376031.1|	-	1.5e-37	129.3	32.6	1.9e-37	129.0	22.6	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
TcdA_TcdB_pore	PF12920.2	gi|15920362|ref|NP_376031.1|	-	0.18	9.6	1.4	0.3	8.9	0.9	1.3	1	0	0	1	1	1	0	TcdA/TcdB	pore	forming	domain
Glyco_tranf_2_2	PF10111.4	gi|15920363|ref|NP_376032.1|	-	5.2e-11	42.1	1.1	1.8e-08	33.8	0.8	2.1	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glycos_transf_2	PF00535.21	gi|15920363|ref|NP_376032.1|	-	2.5e-09	37.0	0.1	3.5e-09	36.5	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|15920363|ref|NP_376032.1|	-	1.5e-05	24.8	0.0	0.023	14.5	0.0	2.1	2	0	0	2	2	2	2	Glycosyltransferase	like	family	2
Glyco_transf_8	PF01501.15	gi|15920363|ref|NP_376032.1|	-	3.6e-05	23.2	0.3	5.5e-05	22.6	0.2	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	8
Glyco_trans_2_3	PF13632.1	gi|15920363|ref|NP_376032.1|	-	0.0024	17.5	0.1	0.028	14.1	0.0	2.1	2	0	0	2	2	2	1	Glycosyl	transferase	family	group	2
Mg296	PF09644.5	gi|15920363|ref|NP_376032.1|	-	0.0053	16.6	0.7	0.015	15.1	0.3	1.7	1	1	1	2	2	2	1	Mg296	protein
Glyco_tranf_2_4	PF13704.1	gi|15920363|ref|NP_376032.1|	-	0.066	13.5	0.0	0.12	12.7	0.0	1.3	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.1	gi|15920363|ref|NP_376032.1|	-	0.098	11.9	0.0	1.9	7.7	0.0	2.2	2	0	0	2	2	2	0	Glycosyl	transferase	family	21
Glycos_transf_1	PF00534.15	gi|15920364|ref|NP_376033.1|	-	3.8e-18	65.4	0.2	7.2e-18	64.5	0.2	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|15920364|ref|NP_376033.1|	-	0.016	14.9	0.0	0.024	14.3	0.0	1.4	1	0	0	1	1	1	0	Glycosyltransferase	Family	4
Epimerase	PF01370.16	gi|15920365|ref|NP_376034.1|	-	1.6e-42	145.5	0.2	2.2e-42	145.0	0.1	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|15920365|ref|NP_376034.1|	-	3.6e-14	52.3	0.0	4.2e-14	52.1	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
3Beta_HSD	PF01073.14	gi|15920365|ref|NP_376034.1|	-	7.1e-14	51.1	0.2	9.6e-14	50.7	0.1	1.1	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
Polysacc_synt_2	PF02719.10	gi|15920365|ref|NP_376034.1|	-	1.2e-08	34.2	0.4	7.1e-07	28.4	0.3	2.7	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.7	gi|15920365|ref|NP_376034.1|	-	3e-08	32.9	0.5	1.2e-05	24.3	0.0	2.1	2	0	0	2	2	2	2	Male	sterility	protein
adh_short	PF00106.20	gi|15920365|ref|NP_376034.1|	-	7.8e-05	22.6	0.2	0.00043	20.2	0.0	2.0	1	1	1	2	2	2	1	short	chain	dehydrogenase
KR	PF08659.5	gi|15920365|ref|NP_376034.1|	-	0.00017	21.3	0.0	0.0023	17.6	0.0	2.1	2	0	0	2	2	2	1	KR	domain
NAD_binding_10	PF13460.1	gi|15920365|ref|NP_376034.1|	-	0.00023	21.2	0.0	0.00068	19.6	0.0	1.9	1	1	0	1	1	1	1	NADH(P)-binding
NmrA	PF05368.8	gi|15920365|ref|NP_376034.1|	-	0.00046	19.5	0.6	0.086	12.0	0.2	2.6	2	1	0	2	2	2	2	NmrA-like	family
PHB_acc_N	PF07879.6	gi|15920365|ref|NP_376034.1|	-	0.08	12.6	0.0	6.7	6.5	0.0	3.0	3	0	0	3	3	3	0	PHB/PHA	accumulation	regulator	DNA-binding	domain
3HCDH_N	PF02737.13	gi|15920365|ref|NP_376034.1|	-	0.1	12.2	0.0	0.17	11.5	0.0	1.2	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Ribosomal_S8e	PF01201.17	gi|15920366|ref|NP_376035.1|	-	8.4e-40	135.9	1.1	9.2e-40	135.8	0.8	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S8e
Prenyltransf	PF01255.14	gi|15920367|ref|NP_376036.1|	-	3.6e-73	245.3	1.0	4.2e-73	245.1	0.7	1.0	1	0	0	1	1	1	1	Putative	undecaprenyl	diphosphate	synthase
Peptidase_M20	PF01546.23	gi|15920368|ref|NP_376037.1|	-	3.4e-25	88.6	0.0	4.1e-25	88.3	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|15920368|ref|NP_376037.1|	-	6.3e-06	25.9	0.0	1.4e-05	24.8	0.0	1.5	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Peptidase_M28	PF04389.12	gi|15920368|ref|NP_376037.1|	-	2e-05	24.4	0.0	3.3e-05	23.7	0.0	1.4	1	0	0	1	1	1	1	Peptidase	family	M28
Aminotran_3	PF00202.16	gi|15920369|ref|NP_376038.1|	-	9.7e-101	336.9	0.0	1.3e-100	336.5	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-III
Aminotran_5	PF00266.14	gi|15920369|ref|NP_376038.1|	-	0.00016	20.5	0.2	0.00059	18.6	0.0	1.9	2	1	0	2	2	2	1	Aminotransferase	class-V
Aminotran_1_2	PF00155.16	gi|15920369|ref|NP_376038.1|	-	0.00042	19.3	0.0	0.00073	18.5	0.0	1.4	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
PC_rep	PF01851.17	gi|15920369|ref|NP_376038.1|	-	0.022	14.9	0.0	0.11	12.7	0.0	2.3	2	0	0	2	2	2	0	Proteasome/cyclosome	repeat
KGG	PF10685.4	gi|15920369|ref|NP_376038.1|	-	0.1	12.5	0.2	0.23	11.4	0.1	1.6	1	0	0	1	1	1	0	Stress-induced	bacterial	acidophilic	repeat	motif
RimK	PF08443.6	gi|15920370|ref|NP_376039.1|	-	2.4e-46	157.5	0.0	3.3e-46	157.1	0.0	1.2	1	0	0	1	1	1	1	RimK-like	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|15920370|ref|NP_376039.1|	-	4e-14	52.7	0.0	5.7e-14	52.2	0.0	1.1	1	0	0	1	1	1	1	ATP-grasp	domain
GSH-S_ATP	PF02955.11	gi|15920370|ref|NP_376039.1|	-	5.4e-12	45.1	0.0	7.9e-12	44.6	0.0	1.2	1	0	0	1	1	1	1	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|15920370|ref|NP_376039.1|	-	9.7e-07	27.8	0.0	1.3e-06	27.4	0.0	1.1	1	0	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp_3	PF02655.9	gi|15920370|ref|NP_376039.1|	-	1e-06	28.6	0.0	1.7e-06	28.0	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_5	PF13549.1	gi|15920370|ref|NP_376039.1|	-	1.6e-05	24.2	0.0	2.8e-05	23.4	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
Dala_Dala_lig_C	PF07478.8	gi|15920370|ref|NP_376039.1|	-	5e-05	22.7	0.0	0.00064	19.1	0.0	2.3	1	1	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
CPSase_L_D2	PF02786.12	gi|15920370|ref|NP_376039.1|	-	0.00029	20.1	0.0	0.00052	19.3	0.0	1.4	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
ATP-grasp	PF02222.17	gi|15920370|ref|NP_376039.1|	-	0.0011	18.3	0.0	0.0021	17.4	0.0	1.4	1	1	0	1	1	1	1	ATP-grasp	domain
Synapsin_C	PF02750.9	gi|15920370|ref|NP_376039.1|	-	0.0013	17.8	0.0	0.057	12.5	0.0	2.1	1	1	1	2	2	2	1	Synapsin,	ATP	binding	domain
ATP-grasp_2	PF08442.5	gi|15920370|ref|NP_376039.1|	-	0.0034	16.7	0.0	0.0064	15.9	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_YheCD	PF14398.1	gi|15920370|ref|NP_376039.1|	-	0.0094	14.7	0.1	0.022	13.5	0.0	1.6	2	0	0	2	2	2	1	YheC/D	like	ATP-grasp
zinc_ribbon_4	PF13717.1	gi|15920371|ref|NP_376040.1|	-	0.018	14.7	0.1	0.027	14.1	0.1	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|15920371|ref|NP_376040.1|	-	0.025	14.1	0.2	0.043	13.4	0.1	1.4	1	1	0	1	1	1	0	zinc-ribbon	domain
DNA_ligase_ZBD	PF03119.11	gi|15920371|ref|NP_376040.1|	-	0.067	12.8	0.7	0.94	9.2	0.2	2.3	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Lar_restr_allev	PF14354.1	gi|15920371|ref|NP_376040.1|	-	0.11	12.7	0.3	0.16	12.3	0.2	1.3	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
TF_Zn_Ribbon	PF08271.7	gi|15920371|ref|NP_376040.1|	-	0.25	10.6	1.9	0.52	9.6	1.3	1.6	1	1	0	1	1	1	0	TFIIB	zinc-binding
HTH_24	PF13412.1	gi|15920372|ref|NP_376041.1|	-	6e-15	54.3	2.1	2.1e-14	52.6	0.7	2.1	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|15920372|ref|NP_376041.1|	-	1.8e-14	52.9	0.0	6e-14	51.2	0.1	1.7	2	0	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
AsnC_trans_reg	PF01037.16	gi|15920372|ref|NP_376041.1|	-	3.6e-13	49.0	0.1	5.9e-13	48.3	0.1	1.4	1	0	0	1	1	1	1	AsnC	family
HTH_11	PF08279.7	gi|15920372|ref|NP_376041.1|	-	2.3e-07	30.3	2.0	5.8e-07	29.0	0.3	2.2	3	0	0	3	3	3	1	HTH	domain
HTH_Mga	PF08280.6	gi|15920372|ref|NP_376041.1|	-	1.4e-05	24.7	0.1	3.4e-05	23.5	0.1	1.7	1	0	0	1	1	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
MarR	PF01047.17	gi|15920372|ref|NP_376041.1|	-	1.6e-05	24.4	0.1	0.00011	21.7	0.1	2.2	2	0	0	2	2	2	1	MarR	family
FeoC	PF09012.5	gi|15920372|ref|NP_376041.1|	-	3.2e-05	23.5	0.1	5.2e-05	22.8	0.0	1.3	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
DUF2250	PF10007.4	gi|15920372|ref|NP_376041.1|	-	6.4e-05	22.7	0.2	0.00014	21.6	0.1	1.5	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
TrmB	PF01978.14	gi|15920372|ref|NP_376041.1|	-	0.00015	21.3	0.6	0.0003	20.4	0.3	1.6	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
NapD	PF03927.8	gi|15920372|ref|NP_376041.1|	-	0.00016	21.4	0.1	0.00031	20.5	0.1	1.5	1	0	0	1	1	1	1	NapD	protein
MarR_2	PF12802.2	gi|15920372|ref|NP_376041.1|	-	0.00017	21.2	0.0	0.0003	20.4	0.0	1.4	1	0	0	1	1	1	1	MarR	family
DUF4423	PF14394.1	gi|15920372|ref|NP_376041.1|	-	0.00018	21.0	0.3	0.00031	20.3	0.2	1.7	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
HTH_5	PF01022.15	gi|15920372|ref|NP_376041.1|	-	0.00047	19.7	0.1	0.00072	19.1	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|15920372|ref|NP_376041.1|	-	0.00068	19.3	0.0	0.0012	18.6	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_34	PF13601.1	gi|15920372|ref|NP_376041.1|	-	0.0022	17.9	0.1	0.0038	17.2	0.1	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_DeoR	PF08220.7	gi|15920372|ref|NP_376041.1|	-	0.0022	17.4	0.2	0.004	16.6	0.1	1.4	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|15920372|ref|NP_376041.1|	-	0.0063	16.4	0.1	0.013	15.4	0.0	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
TFIIE_alpha	PF02002.12	gi|15920372|ref|NP_376041.1|	-	0.0072	15.8	0.6	0.012	15.0	0.4	1.4	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HTH_27	PF13463.1	gi|15920372|ref|NP_376041.1|	-	0.008	16.4	0.1	0.018	15.3	0.0	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_45	PF14947.1	gi|15920372|ref|NP_376041.1|	-	0.0082	15.9	1.1	0.013	15.3	0.2	1.7	2	0	0	2	2	2	1	Winged	helix-turn-helix
Sigma70_r4_2	PF08281.7	gi|15920372|ref|NP_376041.1|	-	0.0083	15.5	0.1	0.016	14.6	0.1	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
Mga	PF05043.8	gi|15920372|ref|NP_376041.1|	-	0.0098	16.1	0.7	0.016	15.4	0.1	1.6	2	0	0	2	2	1	1	Mga	helix-turn-helix	domain
B-block_TFIIIC	PF04182.7	gi|15920372|ref|NP_376041.1|	-	0.011	15.5	0.1	0.018	14.8	0.1	1.4	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
Rio2_N	PF09202.6	gi|15920372|ref|NP_376041.1|	-	0.017	15.2	0.1	0.18	11.9	0.1	2.1	2	0	0	2	2	2	0	Rio2,	N-terminal
DUF2089	PF09862.4	gi|15920372|ref|NP_376041.1|	-	0.031	14.0	0.1	0.043	13.5	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2089)
PAX	PF00292.13	gi|15920372|ref|NP_376041.1|	-	0.038	13.6	1.0	0.61	9.8	0.7	2.2	1	1	0	1	1	1	0	'Paired	box'	domain
Rrf2	PF02082.15	gi|15920372|ref|NP_376041.1|	-	0.04	14.0	0.1	0.094	12.8	0.1	1.6	1	0	0	1	1	1	0	Transcriptional	regulator
Stk19	PF10494.4	gi|15920372|ref|NP_376041.1|	-	0.064	12.6	0.2	0.06	12.7	0.1	1.2	1	0	0	1	1	1	0	Serine-threonine	protein	kinase	19
HTH_12	PF08461.5	gi|15920372|ref|NP_376041.1|	-	0.067	12.9	1.4	0.13	11.9	1.0	1.6	1	0	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
HTH_Tnp_ISL3	PF13542.1	gi|15920372|ref|NP_376041.1|	-	0.07	12.3	0.0	0.13	11.4	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_23	PF13384.1	gi|15920372|ref|NP_376041.1|	-	0.11	12.1	0.0	0.3	10.8	0.0	1.7	2	0	0	2	2	1	0	Homeodomain-like	domain
NTase_sub_bind	PF08780.6	gi|15920372|ref|NP_376041.1|	-	0.12	12.1	0.2	0.3	10.8	0.0	1.8	1	1	1	2	2	2	0	Nucleotidyltransferase	substrate	binding	protein	like
AA_kinase	PF00696.23	gi|15920373|ref|NP_376042.1|	-	2.6e-26	92.6	3.5	3e-26	92.4	2.4	1.0	1	0	0	1	1	1	1	Amino	acid	kinase	family
Semialdhyde_dh	PF01118.19	gi|161751104|ref|NP_376043.2|	-	6.4e-36	123.3	0.0	3.9e-35	120.7	0.0	2.1	2	0	0	2	2	2	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Semialdhyde_dhC	PF02774.13	gi|161751104|ref|NP_376043.2|	-	2.2e-07	30.9	0.0	3e-07	30.4	0.0	1.1	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
GFO_IDH_MocA	PF01408.17	gi|161751104|ref|NP_376043.2|	-	0.1	13.0	0.0	0.19	12.2	0.0	1.5	1	0	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
CoA_binding_2	PF13380.1	gi|161751104|ref|NP_376043.2|	-	0.13	12.4	0.0	0.26	11.4	0.0	1.5	1	0	0	1	1	1	0	CoA	binding	domain
Penicillinase_R	PF03965.11	gi|15920375|ref|NP_376044.1|	-	0.029	14.4	0.1	0.056	13.5	0.0	1.5	1	0	0	1	1	1	0	Penicillinase	repressor
Mpp10	PF04006.7	gi|15920375|ref|NP_376044.1|	-	0.04	12.2	0.8	0.052	11.9	0.5	1.1	1	0	0	1	1	1	0	Mpp10	protein
DUF3896	PF13035.1	gi|15920375|ref|NP_376044.1|	-	0.43	10.6	7.5	0.17	11.9	1.4	2.8	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3896)
AAA_10	PF12846.2	gi|15920376|ref|NP_376045.1|	-	2.6e-20	73.0	1.9	6.1e-20	71.8	1.3	1.7	1	1	0	1	1	1	1	AAA-like	domain
DUF87	PF01935.12	gi|15920376|ref|NP_376045.1|	-	8.9e-07	28.9	2.2	8.9e-07	28.9	1.5	2.5	2	1	0	2	2	2	1	Domain	of	unknown	function	DUF87
DUF853	PF05872.7	gi|15920376|ref|NP_376045.1|	-	0.00032	19.1	0.0	0.32	9.2	0.0	2.2	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
IstB_IS21	PF01695.12	gi|15920376|ref|NP_376045.1|	-	0.01	15.2	0.0	0.03	13.7	0.0	1.8	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
FtsK_SpoIIIE	PF01580.13	gi|15920376|ref|NP_376045.1|	-	0.011	15.1	0.0	0.093	12.1	0.0	2.1	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
ResIII	PF04851.10	gi|15920376|ref|NP_376045.1|	-	0.1	12.4	2.0	0.17	11.7	0.3	2.3	2	1	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
AAA_22	PF13401.1	gi|15920376|ref|NP_376045.1|	-	0.21	11.7	2.6	1.9	8.6	0.0	3.1	4	0	0	4	4	4	0	AAA	domain
AAA_17	PF13207.1	gi|15920376|ref|NP_376045.1|	-	0.63	10.8	4.0	0.55	11.0	0.2	2.8	2	2	1	3	3	3	0	AAA	domain
SIS	PF01380.17	gi|15920377|ref|NP_376046.1|	-	1.4e-17	63.5	0.2	2.5e-17	62.6	0.1	1.4	1	0	0	1	1	1	1	SIS	domain
SIS_2	PF13580.1	gi|15920377|ref|NP_376046.1|	-	1.7e-09	37.5	1.9	1.4e-06	28.0	0.3	2.4	1	1	1	2	2	2	2	SIS	domain
PRMT5	PF05185.11	gi|15920377|ref|NP_376046.1|	-	0.11	11.3	1.3	4.1	6.2	0.1	2.1	1	1	1	2	2	2	0	PRMT5	arginine-N-methyltransferase
zf-C2H2_4	PF13894.1	gi|15920378|ref|NP_376047.1|	-	0.00037	20.6	0.2	0.00082	19.5	0.2	1.6	1	1	0	1	1	1	1	C2H2-type	zinc	finger
DnaA_N	PF11638.3	gi|15920378|ref|NP_376047.1|	-	0.09	12.3	0.4	0.14	11.7	0.2	1.3	1	0	0	1	1	1	0	DnaA	N-terminal	domain
zf-H2C2_5	PF13909.1	gi|15920378|ref|NP_376047.1|	-	0.12	12.6	0.3	0.12	12.6	0.2	2.2	2	0	0	2	2	2	0	C2H2-type	zinc-finger	domain
zf-C2H2	PF00096.21	gi|15920378|ref|NP_376047.1|	-	0.37	11.2	4.4	7.6	7.0	0.0	2.2	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
PBP_sp32	PF07222.7	gi|15920378|ref|NP_376047.1|	-	0.82	8.7	6.4	0.95	8.5	4.5	1.2	1	0	0	1	1	1	0	Proacrosin	binding	protein	sp32
Pox_D5	PF03288.11	gi|15920379|ref|NP_376048.1|	-	0.068	13.4	0.6	0.094	12.9	0.1	1.5	2	0	0	2	2	2	0	Poxvirus	D5	protein-like
DUF4367	PF14285.1	gi|15920379|ref|NP_376048.1|	-	0.12	11.6	0.4	0.17	11.2	0.2	1.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4367)
NAD_binding_8	PF13450.1	gi|15920380|ref|NP_376049.1|	-	0.0016	18.4	0.0	0.0032	17.4	0.0	1.5	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Bac_export_1	PF01311.15	gi|15920381|ref|NP_376050.1|	-	0.37	10.0	5.6	0.38	9.9	3.9	1.0	1	0	0	1	1	1	0	Bacterial	export	proteins,	family	1
TPP_enzyme_M	PF00205.17	gi|15920382|ref|NP_376051.1|	-	1.8e-33	115.1	0.0	3.1e-33	114.4	0.0	1.4	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
TPP_enzyme_N	PF02776.13	gi|15920382|ref|NP_376051.1|	-	3.4e-25	88.5	0.0	5.2e-25	87.9	0.0	1.2	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
PNTB	PF02233.11	gi|15920382|ref|NP_376051.1|	-	0.00076	18.3	0.0	0.0013	17.6	0.0	1.2	1	0	0	1	1	1	1	NAD(P)	transhydrogenase	beta	subunit
DUF2204	PF09970.4	gi|15920383|ref|NP_376052.1|	-	1.2e-61	207.4	4.0	1.3e-61	207.2	2.8	1.0	1	0	0	1	1	1	1	Nucleotidyl	transferase	of	unknown	function	(DUF2204)
bPH_3	PF14470.1	gi|15920383|ref|NP_376052.1|	-	0.093	13.0	1.1	0.69	10.2	0.2	2.4	2	1	0	2	2	2	0	Bacterial	PH	domain
Ribosomal_L40e	PF01020.12	gi|15920384|ref|NP_376053.1|	-	1.2e-07	31.1	5.8	1.4e-07	30.9	4.0	1.2	1	0	0	1	1	1	1	Ribosomal	L40e	family
zinc_ribbon_2	PF13240.1	gi|15920384|ref|NP_376053.1|	-	0.0017	17.8	0.7	0.0024	17.3	0.5	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|15920384|ref|NP_376053.1|	-	0.0029	16.7	0.8	0.0036	16.4	0.5	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|15920384|ref|NP_376053.1|	-	0.015	15.0	1.5	0.019	14.7	1.0	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
HypA	PF01155.14	gi|15920384|ref|NP_376053.1|	-	0.023	14.3	0.3	0.024	14.2	0.2	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
DnaJ_CXXCXGXG	PF00684.14	gi|15920384|ref|NP_376053.1|	-	0.025	14.6	0.8	0.029	14.4	0.5	1.1	1	0	0	1	1	1	0	DnaJ	central	domain
zf-tcix	PF14952.1	gi|15920384|ref|NP_376053.1|	-	0.026	13.8	3.3	0.033	13.5	2.3	1.3	1	0	0	1	1	1	0	Putative	treble-clef,	zinc-finger,	Zn-binding
zf-RanBP	PF00641.13	gi|15920384|ref|NP_376053.1|	-	0.03	13.4	3.5	0.041	13.0	2.4	1.2	1	0	0	1	1	1	0	Zn-finger	in	Ran	binding	protein	and	others
DUF35_N	PF12172.3	gi|15920384|ref|NP_376053.1|	-	0.14	12.1	3.1	0.32	10.9	2.2	1.6	1	1	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zinc_ribbon_6	PF14599.1	gi|15920384|ref|NP_376053.1|	-	0.17	11.7	3.5	0.27	11.0	2.4	1.5	1	1	0	1	1	1	0	Zinc-ribbon
Paired_CXXCH_1	PF09699.5	gi|15920384|ref|NP_376053.1|	-	0.17	11.3	0.4	0.17	11.3	0.3	1.8	2	0	0	2	2	2	0	Doubled	CXXCH	motif	(Paired_CXXCH_1)
Cytochrome_C7	PF14522.1	gi|15920384|ref|NP_376053.1|	-	0.38	10.4	4.1	1.4	8.5	2.8	1.9	1	1	0	1	1	1	0	Cytochrome	c7
Zn-ribbon_8	PF09723.5	gi|15920384|ref|NP_376053.1|	-	0.67	9.9	3.5	9.8	6.2	2.4	2.1	1	1	1	2	2	2	0	Zinc	ribbon	domain
DNA_RNApol_7kD	PF03604.8	gi|15920384|ref|NP_376053.1|	-	0.68	9.4	6.8	0.89	9.0	3.5	2.1	2	1	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Haem_bd	PF14376.1	gi|15920384|ref|NP_376053.1|	-	0.69	9.5	4.5	0.82	9.3	0.5	2.0	1	1	1	2	2	2	0	Haem-binding	domain
zf-C2H2_3	PF13878.1	gi|15920384|ref|NP_376053.1|	-	0.7	9.5	5.1	0.78	9.3	0.1	2.1	1	1	1	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
Mu-like_Com	PF10122.4	gi|15920384|ref|NP_376053.1|	-	0.7	8.9	7.7	0.38	9.8	1.0	2.1	1	1	1	2	2	2	0	Mu-like	prophage	protein	Com
KH_5	PF13184.1	gi|15920385|ref|NP_376054.1|	-	1.1e-09	37.9	0.1	1.9e-09	37.1	0.0	1.4	1	0	0	1	1	1	1	NusA-like	KH	domain
tRNA-synt_2	PF00152.15	gi|15920386|ref|NP_376055.1|	-	1e-92	310.4	1.0	1.3e-92	310.1	0.7	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.20	gi|15920386|ref|NP_376055.1|	-	1.6e-12	47.0	0.2	3.4e-12	46.0	0.1	1.6	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.15	gi|15920386|ref|NP_376055.1|	-	0.004	16.3	0.2	0.93	8.6	0.0	2.3	2	0	0	2	2	2	2	tRNA	synthetases	class	II	core	domain	(F)
PUB	PF09409.5	gi|15920386|ref|NP_376055.1|	-	0.089	12.5	0.8	0.32	10.7	0.5	2.0	1	1	0	1	1	1	0	PUB	domain
TruD	PF01142.13	gi|15920388|ref|NP_376057.1|	-	5.4e-44	150.3	0.0	9.1e-36	123.3	0.0	2.0	1	1	1	2	2	2	2	tRNA	pseudouridine	synthase	D	(TruD)
DUF976	PF06162.7	gi|15920388|ref|NP_376057.1|	-	0.0049	16.4	0.0	0.011	15.2	0.0	1.5	1	0	0	1	1	1	1	Caenorhabditis	elegans	protein	of	unknown	function	(DUF976)
DUF4652	PF15525.1	gi|15920388|ref|NP_376057.1|	-	0.059	12.8	1.6	0.25	10.7	1.1	1.9	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4652)
PTH2	PF01981.11	gi|15920389|ref|NP_376058.1|	-	7.8e-47	157.7	0.0	8.7e-47	157.5	0.0	1.0	1	0	0	1	1	1	1	Peptidyl-tRNA	hydrolase	PTH2
Terpene_synth_C	PF03936.11	gi|15920389|ref|NP_376058.1|	-	0.0061	15.8	0.0	0.0065	15.7	0.0	1.1	1	0	0	1	1	1	1	Terpene	synthase	family,	metal	binding	domain
DUF2000	PF09391.5	gi|15920389|ref|NP_376058.1|	-	0.21	11.2	1.5	1.5	8.4	0.5	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2000)
DUF1610	PF07754.6	gi|15920390|ref|NP_376059.1|	-	2.2e-19	69.1	20.6	2.7e-12	46.5	3.9	2.1	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF1610)
DZR	PF12773.2	gi|15920390|ref|NP_376059.1|	-	0.00015	21.5	10.5	0.0053	16.5	3.8	2.5	1	1	1	2	2	2	2	Double	zinc	ribbon
OrfB_Zn_ribbon	PF07282.6	gi|15920390|ref|NP_376059.1|	-	0.00055	19.5	9.2	0.001	18.7	0.7	2.2	1	1	1	2	2	2	2	Putative	transposase	DNA-binding	domain
zf-ribbon_3	PF13248.1	gi|15920390|ref|NP_376059.1|	-	0.0024	17.0	4.9	0.0024	17.0	3.4	3.3	1	1	2	3	3	3	2	zinc-ribbon	domain
Auto_anti-p27	PF06677.7	gi|15920390|ref|NP_376059.1|	-	0.0055	16.4	7.3	0.21	11.3	1.9	2.4	2	0	0	2	2	2	1	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
C1_1	PF00130.17	gi|15920390|ref|NP_376059.1|	-	0.0073	16.0	8.1	0.018	14.7	1.0	2.1	1	1	1	2	2	2	1	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
PolC_DP2	PF03833.8	gi|15920390|ref|NP_376059.1|	-	0.01	13.5	3.6	0.012	13.3	2.5	1.0	1	0	0	1	1	1	1	DNA	polymerase	II	large	subunit	DP2
DUF1272	PF06906.6	gi|15920390|ref|NP_376059.1|	-	0.02	14.7	7.9	0.48	10.3	0.5	2.8	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF1272)
zinc_ribbon_4	PF13717.1	gi|15920390|ref|NP_376059.1|	-	0.041	13.5	10.7	0.75	9.5	0.0	3.6	3	1	1	4	4	4	0	zinc-ribbon	domain
zf-NADH-PPase	PF09297.6	gi|15920390|ref|NP_376059.1|	-	0.047	13.1	1.2	0.047	13.1	0.8	2.7	3	1	0	3	3	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
zinc_ribbon_5	PF13719.1	gi|15920390|ref|NP_376059.1|	-	0.065	12.8	10.8	0.76	9.4	0.0	3.6	3	1	1	4	4	4	0	zinc-ribbon	domain
IBR	PF01485.16	gi|15920390|ref|NP_376059.1|	-	0.067	13.0	9.5	1.6	8.6	6.6	2.2	1	1	0	1	1	1	0	IBR	domain
TF_Zn_Ribbon	PF08271.7	gi|15920390|ref|NP_376059.1|	-	0.069	12.4	16.6	0.11	11.8	3.0	3.5	3	1	0	3	3	3	0	TFIIB	zinc-binding
Prok-RING_1	PF14446.1	gi|15920390|ref|NP_376059.1|	-	0.078	12.7	9.1	1.1	9.0	6.3	2.1	1	1	0	1	1	1	0	Prokaryotic	RING	finger	family	1
zinc_ribbon_2	PF13240.1	gi|15920390|ref|NP_376059.1|	-	0.086	12.3	23.6	0.95	9.0	5.3	4.0	2	2	1	3	3	3	0	zinc-ribbon	domain
zf-MYND	PF01753.13	gi|15920390|ref|NP_376059.1|	-	0.089	12.6	7.3	0.72	9.7	5.1	2.0	1	1	0	1	1	1	0	MYND	finger
zf-UDP	PF14569.1	gi|15920390|ref|NP_376059.1|	-	0.1	12.3	5.2	0.13	12.0	3.6	1.1	1	0	0	1	1	1	0	Zinc-binding	RING-finger
Dynactin_p62	PF05502.8	gi|15920390|ref|NP_376059.1|	-	0.11	11.1	7.2	0.14	10.8	5.0	1.1	1	0	0	1	1	1	0	Dynactin	p62	family
tRNA-synt_1f	PF01921.13	gi|15920390|ref|NP_376059.1|	-	0.13	10.9	1.5	0.14	10.8	1.0	1.2	1	1	0	1	1	1	0	tRNA	synthetases	class	I	(K)
Nudix_N_2	PF14803.1	gi|15920390|ref|NP_376059.1|	-	0.13	11.9	10.6	9.9	5.9	0.0	3.4	2	1	0	2	2	2	0	Nudix	N-terminal
Tnp_zf-ribbon_2	PF13842.1	gi|15920390|ref|NP_376059.1|	-	0.15	12.4	12.6	0.15	12.4	2.8	2.7	2	1	0	2	2	2	0	DDE_Tnp_1-like	zinc-ribbon
Rpr2	PF04032.11	gi|15920390|ref|NP_376059.1|	-	0.18	11.7	7.7	2.1	8.2	5.3	2.2	1	1	0	1	1	1	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
Acetone_carb_G	PF08882.6	gi|15920390|ref|NP_376059.1|	-	0.19	11.7	7.1	0.96	9.4	0.9	2.5	1	1	1	2	2	2	0	Acetone	carboxylase	gamma	subunit
ADK_lid	PF05191.9	gi|15920390|ref|NP_376059.1|	-	0.2	11.3	9.6	7	6.4	0.1	3.2	2	1	0	2	2	2	0	Adenylate	kinase,	active	site	lid
DUF2296	PF10058.4	gi|15920390|ref|NP_376059.1|	-	0.21	11.3	15.3	0.6	9.8	1.7	3.7	2	2	1	3	3	3	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
PhnA_Zn_Ribbon	PF08274.7	gi|15920390|ref|NP_376059.1|	-	0.23	11.2	6.3	9.9	6.0	0.1	3.1	3	0	0	3	3	3	0	PhnA	Zinc-Ribbon
DRP	PF06044.7	gi|15920390|ref|NP_376059.1|	-	0.26	10.2	1.5	0.23	10.4	1.0	1.1	1	0	0	1	1	1	0	Dam-replacing	family
zf-B_box	PF00643.19	gi|15920390|ref|NP_376059.1|	-	0.26	11.2	11.9	3.1	7.7	5.1	2.7	1	1	1	2	2	2	0	B-box	zinc	finger
HypA	PF01155.14	gi|15920390|ref|NP_376059.1|	-	0.26	10.9	7.1	4.4	7.0	4.9	2.1	1	1	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zf-AN1	PF01428.11	gi|15920390|ref|NP_376059.1|	-	0.36	10.7	9.6	3.5	7.5	0.9	2.7	2	2	1	3	3	3	0	AN1-like	Zinc	finger
DUF2321	PF10083.4	gi|15920390|ref|NP_376059.1|	-	0.37	10.2	5.2	0.44	10.0	1.5	2.1	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2321)
DUF35_N	PF12172.3	gi|15920390|ref|NP_376059.1|	-	0.4	10.6	13.5	0.11	12.4	1.1	3.2	1	1	1	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-C2HC5	PF06221.8	gi|15920390|ref|NP_376059.1|	-	0.41	10.4	11.8	0.25	11.1	3.0	2.5	1	1	1	2	2	2	0	Putative	zinc	finger	motif,	C2HC5-type
UPF0547	PF10571.4	gi|15920390|ref|NP_376059.1|	-	0.5	10.1	16.0	1.9	8.2	7.7	3.3	2	1	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zf-RING_5	PF14634.1	gi|15920390|ref|NP_376059.1|	-	0.51	10.1	11.0	0.79	9.5	7.6	1.4	1	1	0	1	1	1	0	zinc-RING	finger	domain
NOB1_Zn_bind	PF08772.6	gi|15920390|ref|NP_376059.1|	-	0.82	9.5	11.0	0.34	10.7	2.7	2.3	1	1	1	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
TerY-C	PF15616.1	gi|15920390|ref|NP_376059.1|	-	0.86	9.5	8.2	0.4	10.6	0.5	2.1	1	1	1	2	2	2	0	TerY-C	metal	binding	domain
zf-C4_Topoisom	PF01396.14	gi|15920390|ref|NP_376059.1|	-	0.93	9.0	14.7	4.3	6.9	0.4	3.7	1	1	3	4	4	4	0	Topoisomerase	DNA	binding	C4	zinc	finger
zf-Mss51	PF13824.1	gi|15920390|ref|NP_376059.1|	-	1.1	9.1	12.8	3.1	7.7	2.0	2.7	1	1	1	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
NinF	PF05810.7	gi|15920390|ref|NP_376059.1|	-	1.1	9.0	4.8	3.5	7.5	3.3	1.9	1	1	0	1	1	1	0	NinF	protein
Sgf11	PF08209.6	gi|15920390|ref|NP_376059.1|	-	1.3	8.4	12.6	1.5	8.2	0.1	3.6	3	1	1	4	4	4	0	Sgf11	(transcriptional	regulation	protein)
CK_II_beta	PF01214.13	gi|15920390|ref|NP_376059.1|	-	1.6	8.1	5.0	0.28	10.6	0.7	1.7	1	1	1	2	2	2	0	Casein	kinase	II	regulatory	subunit
zf-C3HC4_3	PF13920.1	gi|15920390|ref|NP_376059.1|	-	1.6	8.4	14.6	2.5e+02	1.4	10.1	2.8	1	1	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
zf-LITAF-like	PF10601.4	gi|15920390|ref|NP_376059.1|	-	1.7	8.5	9.9	1.8	8.4	1.1	3.3	1	1	1	2	2	2	0	LITAF-like	zinc	ribbon	domain
DUF164	PF02591.10	gi|15920390|ref|NP_376059.1|	-	2.3	8.0	12.3	2.5	7.9	0.1	3.7	3	1	1	4	4	4	0	Putative	zinc	ribbon	domain
zf-RING_3	PF14369.1	gi|15920390|ref|NP_376059.1|	-	2.5	8.1	16.3	9.2	6.3	2.1	3.5	2	2	1	3	3	3	0	zinc-finger
RNA_POL_M_15KD	PF02150.11	gi|15920390|ref|NP_376059.1|	-	2.8	7.7	9.4	1	9.0	0.4	3.0	1	1	1	2	2	1	0	RNA	polymerases	M/15	Kd	subunit
zf-HIT	PF04438.11	gi|15920390|ref|NP_376059.1|	-	3	7.5	18.7	3.2	7.4	5.7	3.1	2	1	1	3	3	3	0	HIT	zinc	finger
C1_3	PF07649.7	gi|15920390|ref|NP_376059.1|	-	3.9	7.5	16.0	3.1	7.9	4.0	2.4	2	1	0	2	2	2	0	C1-like	domain
NMD3	PF04981.8	gi|15920390|ref|NP_376059.1|	-	6.1	5.8	8.3	7.2	5.6	5.8	1.2	1	0	0	1	1	1	0	NMD3	family
zf-C2H2_3	PF13878.1	gi|15920390|ref|NP_376059.1|	-	7.5	6.2	6.8	8.2	6.0	0.2	2.9	3	1	0	3	3	3	0	zinc-finger	of	acetyl-transferase	ESCO
zf-CCHC	PF00098.18	gi|15920390|ref|NP_376059.1|	-	7.8	6.6	20.4	11	6.1	0.5	4.1	4	0	0	4	4	4	0	Zinc	knuckle
Ribosomal_L32p	PF01783.18	gi|15920390|ref|NP_376059.1|	-	9.3	6.5	9.8	1.6e+03	-0.7	6.8	3.0	1	1	0	1	1	1	0	Ribosomal	L32p	protein	family
EF1_GNE	PF00736.14	gi|15920391|ref|NP_376060.1|	-	3.1e-22	78.0	0.2	3.3e-22	77.9	0.1	1.0	1	0	0	1	1	1	1	EF-1	guanine	nucleotide	exchange	domain
AAA	PF00004.24	gi|15920392|ref|NP_376061.1|	-	3.7e-100	331.3	0.0	4.8e-49	165.9	0.0	2.5	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.7	gi|15920392|ref|NP_376061.1|	-	1.5e-16	60.1	0.1	3.9e-08	32.6	0.0	2.8	2	1	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
CDC48_2	PF02933.12	gi|15920392|ref|NP_376061.1|	-	1.3e-15	56.7	1.0	2.7e-15	55.7	0.7	1.6	1	0	0	1	1	1	1	Cell	division	protein	48	(CDC48),	domain	2
AAA_2	PF07724.9	gi|15920392|ref|NP_376061.1|	-	7.4e-15	55.2	0.1	6.9e-07	29.3	0.0	2.9	3	0	0	3	3	2	2	AAA	domain	(Cdc48	subfamily)
AAA_22	PF13401.1	gi|15920392|ref|NP_376061.1|	-	5.5e-14	52.4	0.9	4.9e-05	23.4	0.1	4.7	3	2	0	3	3	2	2	AAA	domain
AAA_16	PF13191.1	gi|15920392|ref|NP_376061.1|	-	6.6e-13	49.0	0.0	5.5e-05	23.2	0.0	3.8	2	2	0	2	2	2	2	AAA	ATPase	domain
AAA_17	PF13207.1	gi|15920392|ref|NP_376061.1|	-	3.1e-12	47.3	2.6	1.9e-05	25.4	0.0	4.0	4	1	0	4	4	3	2	AAA	domain
AAA_5	PF07728.9	gi|15920392|ref|NP_376061.1|	-	4.4e-12	45.9	1.9	0.00012	21.8	0.1	4.2	3	2	0	3	3	2	2	AAA	domain	(dynein-related	subfamily)
AAA_33	PF13671.1	gi|15920392|ref|NP_376061.1|	-	1.4e-11	44.4	0.0	0.00027	20.8	0.0	2.9	2	0	0	2	2	2	2	AAA	domain
AAA_14	PF13173.1	gi|15920392|ref|NP_376061.1|	-	5.4e-11	42.4	0.0	0.00018	21.4	0.0	2.9	3	0	0	3	3	2	2	AAA	domain
TIP49	PF06068.8	gi|15920392|ref|NP_376061.1|	-	1.6e-10	40.3	0.0	7.7e-05	21.5	0.0	2.5	2	0	0	2	2	2	2	TIP49	C-terminus
IstB_IS21	PF01695.12	gi|15920392|ref|NP_376061.1|	-	7.9e-10	38.4	0.1	0.0017	17.8	0.0	3.0	3	0	0	3	3	3	2	IstB-like	ATP	binding	protein
Zeta_toxin	PF06414.7	gi|15920392|ref|NP_376061.1|	-	1.2e-09	37.6	0.0	0.00091	18.3	0.0	2.6	2	0	0	2	2	2	2	Zeta	toxin
Arch_ATPase	PF01637.13	gi|15920392|ref|NP_376061.1|	-	1.3e-08	34.8	0.4	0.0021	17.8	0.1	4.4	2	2	2	4	4	4	1	Archaeal	ATPase
AAA_18	PF13238.1	gi|15920392|ref|NP_376061.1|	-	4e-08	33.6	0.9	0.007	16.6	0.0	3.5	4	0	0	4	4	3	2	AAA	domain
AAA_28	PF13521.1	gi|15920392|ref|NP_376061.1|	-	7.1e-08	32.5	0.0	0.012	15.5	0.0	2.9	2	0	0	2	2	2	2	AAA	domain
Mg_chelatase	PF01078.16	gi|15920392|ref|NP_376061.1|	-	1.4e-07	30.9	0.3	0.0051	16.0	0.0	2.6	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
CDC48_N	PF02359.13	gi|15920392|ref|NP_376061.1|	-	2.7e-07	30.4	0.2	2.3e-06	27.4	0.1	2.5	2	0	0	2	2	2	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
AAA_25	PF13481.1	gi|15920392|ref|NP_376061.1|	-	4.5e-07	29.4	5.1	0.0067	15.8	0.1	3.6	2	2	0	3	3	3	2	AAA	domain
RNA_helicase	PF00910.17	gi|15920392|ref|NP_376061.1|	-	5.8e-07	29.6	0.0	0.017	15.3	0.0	2.7	2	0	0	2	2	2	2	RNA	helicase
Sigma54_activat	PF00158.21	gi|15920392|ref|NP_376061.1|	-	1.1e-06	28.1	0.3	0.22	10.9	0.0	4.2	3	2	0	3	3	2	2	Sigma-54	interaction	domain
AAA_19	PF13245.1	gi|15920392|ref|NP_376061.1|	-	1.6e-06	27.7	1.1	0.045	13.5	0.1	3.1	2	0	0	2	2	2	2	Part	of	AAA	domain
AAA_24	PF13479.1	gi|15920392|ref|NP_376061.1|	-	3.7e-06	26.6	0.2	0.038	13.5	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
Sigma54_activ_2	PF14532.1	gi|15920392|ref|NP_376061.1|	-	4.7e-06	26.6	0.0	0.097	12.7	0.0	2.6	2	0	0	2	2	2	2	Sigma-54	interaction	domain
NACHT	PF05729.7	gi|15920392|ref|NP_376061.1|	-	4.8e-06	26.3	0.8	0.4	10.3	0.1	3.9	4	0	0	4	4	4	2	NACHT	domain
DUF815	PF05673.8	gi|15920392|ref|NP_376061.1|	-	5e-06	25.6	0.0	0.12	11.3	0.0	3.7	2	1	1	3	3	3	2	Protein	of	unknown	function	(DUF815)
AAA_3	PF07726.6	gi|15920392|ref|NP_376061.1|	-	6.3e-06	25.8	0.0	0.086	12.4	0.0	2.8	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
ABC_tran	PF00005.22	gi|15920392|ref|NP_376061.1|	-	1.4e-05	25.4	0.0	0.2	11.9	0.0	2.5	2	0	0	2	2	2	2	ABC	transporter
NB-ARC	PF00931.17	gi|15920392|ref|NP_376061.1|	-	0.00014	20.8	0.6	0.065	12.0	0.0	2.8	3	0	0	3	3	2	1	NB-ARC	domain
KaiC	PF06745.8	gi|15920392|ref|NP_376061.1|	-	0.00017	20.7	1.7	0.84	8.6	0.0	4.0	3	1	1	4	4	4	1	KaiC
Bac_DnaA	PF00308.13	gi|15920392|ref|NP_376061.1|	-	0.0002	21.0	0.0	0.049	13.2	0.0	2.9	2	1	0	2	2	2	1	Bacterial	dnaA	protein
PhoH	PF02562.11	gi|15920392|ref|NP_376061.1|	-	0.00048	19.4	0.2	0.19	10.9	0.0	2.5	2	0	0	2	2	2	1	PhoH-like	protein
Parvo_NS1	PF01057.12	gi|15920392|ref|NP_376061.1|	-	0.00059	18.7	0.1	0.77	8.5	0.0	2.3	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
Sds3	PF08598.6	gi|15920392|ref|NP_376061.1|	-	0.00097	18.7	0.3	0.0016	18.0	0.2	1.3	1	0	0	1	1	1	1	Sds3-like
NTPase_1	PF03266.10	gi|15920392|ref|NP_376061.1|	-	0.0018	18.0	5.3	1.4	8.6	0.0	4.5	3	2	1	5	5	5	1	NTPase
ATP-synt_ab	PF00006.20	gi|15920392|ref|NP_376061.1|	-	0.0022	17.5	0.0	0.32	10.4	0.0	2.5	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AFG1_ATPase	PF03969.11	gi|15920392|ref|NP_376061.1|	-	0.0025	16.6	0.0	0.96	8.1	0.0	2.5	2	0	0	2	2	2	1	AFG1-like	ATPase
Guanylate_kin	PF00625.16	gi|15920392|ref|NP_376061.1|	-	0.0027	17.1	0.1	11	5.4	0.0	4.0	3	1	1	4	4	4	0	Guanylate	kinase
UPF0079	PF02367.12	gi|15920392|ref|NP_376061.1|	-	0.0034	16.9	0.1	2.2	7.9	0.0	2.4	2	0	0	2	2	2	1	Uncharacterised	P-loop	hydrolase	UPF0079
SKI	PF01202.17	gi|15920392|ref|NP_376061.1|	-	0.0036	17.1	0.0	3.5	7.4	0.0	2.7	2	0	0	2	2	2	0	Shikimate	kinase
Vps4_C	PF09336.5	gi|15920392|ref|NP_376061.1|	-	0.0048	16.7	0.1	0.53	10.2	0.0	3.2	3	0	0	3	3	2	1	Vps4	C	terminal	oligomerisation	domain
AAA_11	PF13086.1	gi|15920392|ref|NP_376061.1|	-	0.0075	15.8	0.1	1.4	8.4	0.1	2.7	2	1	0	2	2	2	1	AAA	domain
Viral_helicase1	PF01443.13	gi|15920392|ref|NP_376061.1|	-	0.012	15.1	0.0	0.62	9.5	0.0	2.2	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
AAA_10	PF12846.2	gi|15920392|ref|NP_376061.1|	-	0.012	15.0	2.5	3.5	6.9	0.1	3.5	2	2	2	4	4	4	0	AAA-like	domain
DUF2075	PF09848.4	gi|15920392|ref|NP_376061.1|	-	0.022	13.7	0.0	5.4	5.8	0.0	2.5	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_30	PF13604.1	gi|15920392|ref|NP_376061.1|	-	0.023	14.2	0.0	2.6	7.5	0.0	2.5	2	0	0	2	2	2	0	AAA	domain
IPT	PF01745.11	gi|15920392|ref|NP_376061.1|	-	0.025	13.7	0.3	1.1	8.4	0.1	2.4	2	0	0	2	2	2	0	Isopentenyl	transferase
ResIII	PF04851.10	gi|15920392|ref|NP_376061.1|	-	0.027	14.2	0.0	2	8.2	0.0	2.6	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
PduV-EutP	PF10662.4	gi|15920392|ref|NP_376061.1|	-	0.031	13.7	0.0	10	5.6	0.0	2.5	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
KTI12	PF08433.5	gi|15920392|ref|NP_376061.1|	-	0.031	13.4	0.0	8.8	5.4	0.0	2.7	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
T2SE	PF00437.15	gi|15920392|ref|NP_376061.1|	-	0.033	13.1	0.0	5	5.9	0.0	2.5	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
AAA_23	PF13476.1	gi|15920392|ref|NP_376061.1|	-	0.055	13.7	0.0	5.3	7.3	0.0	2.8	3	0	0	3	3	2	0	AAA	domain
AAA_29	PF13555.1	gi|15920392|ref|NP_376061.1|	-	0.057	12.9	0.0	9.1	5.8	0.0	2.4	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
MMR_HSR1	PF01926.18	gi|15920392|ref|NP_376061.1|	-	0.13	12.2	0.0	14	5.7	0.0	3.1	2	1	0	2	2	2	0	50S	ribosome-binding	GTPase
XPG_I	PF00867.13	gi|15920393|ref|NP_376062.1|	-	1.1e-25	89.4	0.1	4.2e-25	87.6	0.0	2.0	3	0	0	3	3	3	1	XPG	I-region
XPG_N	PF00752.12	gi|15920393|ref|NP_376062.1|	-	7.6e-11	42.1	0.0	1.9e-10	40.8	0.0	1.7	1	0	0	1	1	1	1	XPG	N-terminal	domain
5_3_exonuc	PF01367.15	gi|15920393|ref|NP_376062.1|	-	7.1e-05	22.9	0.2	7.1e-05	22.9	0.1	2.4	2	1	0	2	2	2	1	5'-3'	exonuclease,	C-terminal	SAM	fold
DUF2458	PF10454.4	gi|15920393|ref|NP_376062.1|	-	0.0044	16.9	1.9	0.014	15.2	1.4	1.9	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF2458)
Nitro_FeMo-Co	PF02579.12	gi|15920393|ref|NP_376062.1|	-	0.089	12.8	0.3	0.2	11.7	0.2	1.6	1	0	0	1	1	1	0	Dinitrogenase	iron-molybdenum	cofactor
NAD_binding_7	PF13241.1	gi|15920394|ref|NP_376063.1|	-	4.4e-24	84.7	0.2	9.7e-24	83.5	0.1	1.6	2	0	0	2	2	2	1	Putative	NAD(P)-binding
TrkA_N	PF02254.13	gi|15920394|ref|NP_376063.1|	-	6.7e-07	29.3	0.3	3.2e-06	27.1	0.2	2.0	1	1	0	1	1	1	1	TrkA-N	domain
Shikimate_DH	PF01488.15	gi|15920394|ref|NP_376063.1|	-	2e-05	24.6	0.0	4.3e-05	23.6	0.0	1.5	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
Pyr_redox	PF00070.22	gi|15920394|ref|NP_376063.1|	-	0.00037	20.8	0.0	0.0018	18.6	0.0	2.2	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_2	PF03446.10	gi|15920394|ref|NP_376063.1|	-	0.014	15.2	0.0	0.022	14.6	0.0	1.3	1	0	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
3HCDH_N	PF02737.13	gi|15920394|ref|NP_376063.1|	-	0.014	15.0	0.1	0.033	13.8	0.0	1.7	1	1	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Pyr_redox_2	PF07992.9	gi|15920394|ref|NP_376063.1|	-	0.064	13.1	0.7	0.11	12.4	0.1	1.7	2	1	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|15920394|ref|NP_376063.1|	-	0.084	11.7	0.1	0.12	11.2	0.0	1.1	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
S-AdoMet_synt_C	PF02773.11	gi|15920394|ref|NP_376063.1|	-	0.12	12.0	0.1	0.21	11.3	0.0	1.4	1	0	0	1	1	1	0	S-adenosylmethionine	synthetase,	C-terminal	domain
FAD_binding_2	PF00890.19	gi|15920394|ref|NP_376063.1|	-	0.19	10.5	0.0	0.26	10.0	0.0	1.1	1	0	0	1	1	1	0	FAD	binding	domain
GlutR_N	PF05201.10	gi|15920395|ref|NP_376064.1|	-	1.7e-33	115.3	0.7	4e-33	114.1	0.1	1.9	2	0	0	2	2	2	1	Glutamyl-tRNAGlu	reductase,	N-terminal	domain
Shikimate_DH	PF01488.15	gi|15920395|ref|NP_376064.1|	-	8e-15	55.1	0.5	2.2e-14	53.7	0.1	2.0	1	1	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
GlutR_dimer	PF00745.15	gi|15920395|ref|NP_376064.1|	-	9.5e-14	51.1	5.2	2.5e-13	49.8	3.6	1.7	1	0	0	1	1	1	1	Glutamyl-tRNAGlu	reductase,	dimerisation	domain
F420_oxidored	PF03807.12	gi|15920395|ref|NP_376064.1|	-	4.7e-09	36.5	0.0	2.5e-08	34.2	0.0	2.2	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_2	PF03446.10	gi|15920395|ref|NP_376064.1|	-	1.4e-05	25.0	0.1	4.8e-05	23.2	0.0	2.0	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|15920395|ref|NP_376064.1|	-	5.1e-05	22.4	0.1	0.00011	21.4	0.1	1.6	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
IlvN	PF07991.7	gi|15920395|ref|NP_376064.1|	-	0.00021	20.6	0.1	0.00054	19.3	0.0	1.7	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
NAD_Gly3P_dh_N	PF01210.18	gi|15920395|ref|NP_376064.1|	-	0.0012	18.6	1.1	0.0064	16.2	0.0	2.6	3	0	0	3	3	3	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
TrkA_N	PF02254.13	gi|15920395|ref|NP_376064.1|	-	0.0015	18.5	2.3	0.0064	16.4	0.0	2.5	2	1	0	2	2	2	1	TrkA-N	domain
GFO_IDH_MocA	PF01408.17	gi|15920395|ref|NP_376064.1|	-	0.0015	19.0	0.0	0.0061	17.0	0.0	2.0	2	0	0	2	2	2	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
Ldh_1_N	PF00056.18	gi|15920395|ref|NP_376064.1|	-	0.0017	18.1	0.0	0.004	16.9	0.0	1.7	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	NAD	binding	domain
ThiF	PF00899.16	gi|15920395|ref|NP_376064.1|	-	0.0021	17.9	2.5	0.0055	16.5	0.0	2.4	2	1	0	2	2	2	1	ThiF	family
ApbA	PF02558.11	gi|15920395|ref|NP_376064.1|	-	0.0024	17.3	0.0	0.0061	16.0	0.0	1.7	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
NAD_binding_7	PF13241.1	gi|15920395|ref|NP_376064.1|	-	0.0027	17.9	0.6	0.075	13.3	0.0	2.4	2	0	0	2	2	2	1	Putative	NAD(P)-binding
Pyr_redox	PF00070.22	gi|15920395|ref|NP_376064.1|	-	0.0071	16.7	0.1	0.033	14.5	0.1	2.2	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
YcgL	PF05166.8	gi|15920395|ref|NP_376064.1|	-	0.01	15.9	0.3	0.091	12.9	0.0	2.4	2	0	0	2	2	2	0	YcgL	domain
DapB_N	PF01113.15	gi|15920395|ref|NP_376064.1|	-	0.012	15.5	0.0	0.026	14.4	0.0	1.6	1	0	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
3HCDH_N	PF02737.13	gi|15920395|ref|NP_376064.1|	-	0.017	14.7	1.3	0.16	11.6	0.0	2.6	3	0	0	3	3	3	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
ELFV_dehydrog	PF00208.16	gi|15920395|ref|NP_376064.1|	-	0.029	13.9	0.7	0.029	13.9	0.5	1.9	1	1	0	1	1	1	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
FAD_binding_3	PF01494.14	gi|15920395|ref|NP_376064.1|	-	0.059	12.4	0.1	0.14	11.1	0.0	1.6	2	0	0	2	2	2	0	FAD	binding	domain
Radical_SAM	PF04055.16	gi|15920395|ref|NP_376064.1|	-	0.49	10.5	3.1	1.7	8.7	0.7	2.6	3	1	1	4	4	4	0	Radical	SAM	superfamily
DHQ_synthase	PF01761.15	gi|15920395|ref|NP_376064.1|	-	1.2	7.9	6.2	0.33	9.8	1.4	2.0	2	1	0	2	2	2	0	3-dehydroquinate	synthase
EF-hand_8	PF13833.1	gi|15920395|ref|NP_376064.1|	-	1.3	8.6	3.6	4.1	7.1	0.1	3.0	4	0	0	4	4	3	0	EF-hand	domain	pair
ALAD	PF00490.16	gi|15920396|ref|NP_376065.1|	-	7e-140	465.5	0.0	7.9e-140	465.3	0.0	1.0	1	0	0	1	1	1	1	Delta-aminolevulinic	acid	dehydratase
Aminotran_3	PF00202.16	gi|15920397|ref|NP_376066.1|	-	1.7e-47	161.9	0.1	2.6e-47	161.3	0.0	1.3	1	0	0	1	1	1	1	Aminotransferase	class-III
Aminotran_1_2	PF00155.16	gi|15920397|ref|NP_376066.1|	-	4.2e-06	25.9	0.0	5e-06	25.7	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Porphobil_deam	PF01379.15	gi|15920398|ref|NP_376067.1|	-	1.2e-56	191.0	0.0	1.5e-56	190.6	0.0	1.1	1	0	0	1	1	1	1	Porphobilinogen	deaminase,	dipyromethane	cofactor	binding	domain
Porphobil_deamC	PF03900.10	gi|15920398|ref|NP_376067.1|	-	3.3e-06	27.1	0.0	7.4e-06	25.9	0.0	1.6	1	0	0	1	1	1	1	Porphobilinogen	deaminase,	C-terminal	domain
Phytochelatin	PF05023.9	gi|15920398|ref|NP_376067.1|	-	0.011	14.6	0.0	0.022	13.6	0.0	1.5	1	0	0	1	1	1	0	Phytochelatin	synthase
B12-binding	PF02310.14	gi|15920398|ref|NP_376067.1|	-	0.085	12.7	0.1	0.23	11.3	0.0	1.7	2	0	0	2	2	2	0	B12	binding	domain
HEM4	PF02602.10	gi|15920399|ref|NP_376068.1|	-	4.7e-19	68.5	0.0	7e-19	67.9	0.0	1.3	1	0	0	1	1	1	1	Uroporphyrinogen-III	synthase	HemD
Phosphodiest	PF01663.17	gi|15920401|ref|NP_376070.1|	-	2.3e-12	46.9	0.1	2.8e-12	46.6	0.0	1.1	1	0	0	1	1	1	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
Fer2_BFD	PF04324.10	gi|15920402|ref|NP_376071.1|	-	0.00014	21.8	0.5	0.00025	21.0	0.4	1.5	1	0	0	1	1	1	1	BFD-like	[2Fe-2S]	binding	domain
Pyr_redox_2	PF07992.9	gi|15920402|ref|NP_376071.1|	-	0.0059	16.5	0.0	2	8.2	0.0	2.6	1	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|15920402|ref|NP_376071.1|	-	0.039	12.8	3.4	0.079	11.8	0.2	2.1	2	0	0	2	2	2	0	Glucose	inhibited	division	protein	A
DUF627	PF04781.7	gi|15920402|ref|NP_376071.1|	-	0.083	12.5	0.1	0.17	11.5	0.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF627)
DAO	PF01266.19	gi|15920403|ref|NP_376072.1|	-	1.7e-49	168.6	0.0	2e-49	168.4	0.0	1.0	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Pyr_redox_3	PF13738.1	gi|15920403|ref|NP_376072.1|	-	4.3e-08	33.4	0.0	4.6e-06	26.8	0.0	2.1	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|15920403|ref|NP_376072.1|	-	5.5e-08	32.0	0.4	6.1e-05	22.0	0.0	2.2	2	0	0	2	2	2	2	Glucose	inhibited	division	protein	A
NAD_binding_8	PF13450.1	gi|15920403|ref|NP_376072.1|	-	2.2e-06	27.6	0.0	4.7e-06	26.5	0.0	1.6	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_2	PF07992.9	gi|15920403|ref|NP_376072.1|	-	8.9e-06	25.7	0.0	0.037	13.8	0.0	2.1	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.12	gi|15920403|ref|NP_376072.1|	-	0.00029	20.0	0.2	0.00064	18.8	0.1	1.5	1	0	0	1	1	1	1	Thi4	family
FAD_binding_2	PF00890.19	gi|15920403|ref|NP_376072.1|	-	0.0003	19.7	0.0	0.0068	15.2	0.0	2.0	2	0	0	2	2	2	1	FAD	binding	domain
FAD_binding_3	PF01494.14	gi|15920403|ref|NP_376072.1|	-	0.0025	16.9	0.2	0.0035	16.4	0.1	1.2	1	0	0	1	1	1	1	FAD	binding	domain
NAD_binding_9	PF13454.1	gi|15920403|ref|NP_376072.1|	-	0.0056	16.4	0.0	0.058	13.1	0.0	2.2	2	0	0	2	2	2	1	FAD-NAD(P)-binding
Pyr_redox	PF00070.22	gi|15920403|ref|NP_376072.1|	-	0.0068	16.7	0.0	0.015	15.6	0.0	1.6	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|15920403|ref|NP_376072.1|	-	0.0069	14.8	1.3	0.15	10.5	0.1	2.1	2	0	0	2	2	2	1	HI0933-like	protein
Shikimate_DH	PF01488.15	gi|15920403|ref|NP_376072.1|	-	0.0096	16.0	1.0	0.018	15.1	0.7	1.4	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
Lycopene_cycl	PF05834.7	gi|15920403|ref|NP_376072.1|	-	0.031	13.1	0.0	0.051	12.4	0.0	1.2	1	0	0	1	1	1	0	Lycopene	cyclase	protein
TrkA_N	PF02254.13	gi|15920403|ref|NP_376072.1|	-	0.039	13.9	0.0	0.068	13.1	0.0	1.4	1	0	0	1	1	1	0	TrkA-N	domain
ApbA	PF02558.11	gi|15920403|ref|NP_376072.1|	-	0.041	13.3	0.0	0.066	12.6	0.0	1.4	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
ThiF	PF00899.16	gi|15920403|ref|NP_376072.1|	-	0.066	13.0	0.0	0.11	12.2	0.0	1.4	1	0	0	1	1	1	0	ThiF	family
NAD_Gly3P_dh_N	PF01210.18	gi|15920403|ref|NP_376072.1|	-	0.13	11.9	0.0	0.29	10.8	0.0	1.6	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Lactamase_B_2	PF12706.2	gi|15920404|ref|NP_376073.1|	-	1.1e-06	28.3	1.1	3e-06	26.9	0.2	1.8	2	0	0	2	2	2	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|15920404|ref|NP_376073.1|	-	0.72	9.4	7.5	0.71	9.4	2.8	2.4	2	1	0	2	2	2	0	Metallo-beta-lactamase	superfamily
DNA_ligase_A_M	PF01068.16	gi|15920405|ref|NP_376074.1|	-	1.8e-58	197.2	1.6	3e-58	196.5	1.1	1.4	1	0	0	1	1	1	1	ATP	dependent	DNA	ligase	domain
DNA_ligase_A_N	PF04675.9	gi|15920405|ref|NP_376074.1|	-	4.9e-53	179.5	0.6	7.9e-53	178.8	0.4	1.3	1	0	0	1	1	1	1	DNA	ligase	N	terminus
DNA_ligase_A_C	PF04679.10	gi|15920405|ref|NP_376074.1|	-	1.7e-27	95.6	0.0	3.5e-27	94.6	0.0	1.5	1	0	0	1	1	1	1	ATP	dependent	DNA	ligase	C	terminal	region
mRNA_cap_enzyme	PF01331.14	gi|15920405|ref|NP_376074.1|	-	0.023	14.3	0.6	0.25	11.0	0.1	2.3	2	0	0	2	2	2	0	mRNA	capping	enzyme,	catalytic	domain
DNA_ligase_OB_2	PF14743.1	gi|15920405|ref|NP_376074.1|	-	0.035	13.7	0.2	1.7	8.3	0.0	2.7	2	0	0	2	2	2	0	DNA	ligase	OB-like	domain
dUTPase	PF00692.14	gi|15920406|ref|NP_376075.1|	-	3.4e-23	81.5	0.0	4.4e-23	81.1	0.0	1.2	1	0	0	1	1	1	1	dUTPase
DCD	PF06559.6	gi|15920406|ref|NP_376075.1|	-	1.2e-06	27.2	0.0	5.4e-06	25.0	0.0	2.0	1	1	0	1	1	1	1	2'-deoxycytidine	5'-triphosphate	deaminase	(DCD)
FlxA	PF14282.1	gi|15920407|ref|NP_376076.1|	-	0.0017	18.2	1.3	0.0039	17.1	0.9	1.6	1	0	0	1	1	1	1	FlxA-like	protein
AAA_32	PF13654.1	gi|15920407|ref|NP_376076.1|	-	0.0057	15.3	0.6	0.0057	15.3	0.4	1.5	1	1	0	1	1	1	1	AAA	domain
HSBP1	PF06825.7	gi|15920407|ref|NP_376076.1|	-	0.0074	15.8	0.6	0.02	14.4	0.2	1.8	1	1	0	1	1	1	1	Heat	shock	factor	binding	protein	1
DUF1778	PF08681.6	gi|15920407|ref|NP_376076.1|	-	0.011	15.5	0.1	0.25	11.2	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1778)
Fe-S_assembly	PF04384.8	gi|15920407|ref|NP_376076.1|	-	0.024	15.0	0.1	0.058	13.7	0.1	1.6	1	0	0	1	1	1	0	Iron-sulphur	cluster	assembly
RHH_1	PF01402.16	gi|15920407|ref|NP_376076.1|	-	0.024	14.5	0.1	0.024	14.5	0.1	2.9	3	0	0	3	3	3	0	Ribbon-helix-helix	protein,	copG	family
FliD_C	PF07195.7	gi|15920407|ref|NP_376076.1|	-	0.039	13.2	0.1	0.075	12.3	0.1	1.6	1	0	0	1	1	1	0	Flagellar	hook-associated	protein	2	C-terminus
DUF2730	PF10805.3	gi|15920407|ref|NP_376076.1|	-	0.064	13.0	0.1	0.15	11.8	0.1	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2730)
Hemagglutinin	PF00509.13	gi|15920407|ref|NP_376076.1|	-	0.075	11.1	0.4	0.14	10.2	0.3	1.4	1	0	0	1	1	1	0	Haemagglutinin
BLOC1_2	PF10046.4	gi|15920407|ref|NP_376076.1|	-	0.082	13.0	0.2	0.082	13.0	0.1	2.6	3	1	1	4	4	4	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
DUF972	PF06156.8	gi|15920407|ref|NP_376076.1|	-	0.11	12.7	3.3	0.16	12.3	0.7	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF972)
Fib_alpha	PF08702.5	gi|15920407|ref|NP_376076.1|	-	0.19	11.8	1.8	0.22	11.6	0.4	1.7	1	1	1	2	2	2	0	Fibrinogen	alpha/beta	chain	family
HalX	PF08663.5	gi|15920407|ref|NP_376076.1|	-	0.2	11.6	3.3	0.31	11.0	0.1	2.6	2	1	0	2	2	2	0	HalX	domain
GLE1	PF07817.8	gi|15920407|ref|NP_376076.1|	-	0.3	9.9	1.8	0.74	8.6	0.3	1.9	2	0	0	2	2	2	0	GLE1-like	protein
Imm3	PF14425.1	gi|15920407|ref|NP_376076.1|	-	0.31	11.0	3.5	6.1	6.8	0.1	3.1	3	0	0	3	3	3	0	Immunity	protein	Imm3
DUF904	PF06005.7	gi|15920407|ref|NP_376076.1|	-	0.8	10.0	9.4	0.38	11.0	1.1	3.2	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF904)
Syntaxin	PF00804.20	gi|15920407|ref|NP_376076.1|	-	0.86	9.7	7.7	2.4	8.3	2.5	2.7	1	1	2	3	3	3	0	Syntaxin
DUF342	PF03961.8	gi|15920407|ref|NP_376076.1|	-	1.4	7.2	6.6	1	7.6	3.2	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
Use1	PF09753.4	gi|15920407|ref|NP_376076.1|	-	1.7	8.0	7.0	73	2.6	4.8	2.3	1	1	0	1	1	1	0	Membrane	fusion	protein	Use1
DUF896	PF05979.7	gi|15920407|ref|NP_376076.1|	-	1.9	8.1	7.4	0.42	10.2	0.4	2.9	3	0	0	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF896)
DivIC	PF04977.10	gi|15920407|ref|NP_376076.1|	-	2.2	7.8	6.6	3.1	7.3	0.3	3.1	2	1	1	3	3	3	0	Septum	formation	initiator
Thioredoxin_3	PF13192.1	gi|15920408|ref|NP_376077.1|	-	5.9e-28	96.5	1.7	5.2e-17	61.4	1.4	2.4	2	0	0	2	2	2	2	Thioredoxin	domain
Thioredoxin	PF00085.15	gi|15920408|ref|NP_376077.1|	-	7.5e-05	22.3	2.3	0.015	14.9	0.3	2.5	2	1	0	2	2	2	2	Thioredoxin
Thioredoxin_2	PF13098.1	gi|15920408|ref|NP_376077.1|	-	0.00011	22.3	5.7	0.01	16.0	0.1	3.7	2	2	0	2	2	2	1	Thioredoxin-like	domain
Glutaredoxin	PF00462.19	gi|15920408|ref|NP_376077.1|	-	0.00021	21.2	5.9	0.3	11.1	0.0	3.3	2	1	0	2	2	2	2	Glutaredoxin
Thioredoxin_7	PF13899.1	gi|15920408|ref|NP_376077.1|	-	0.0034	17.3	0.2	0.022	14.8	0.0	2.1	2	0	0	2	2	2	1	Thioredoxin-like
TrbC_Ftype	PF09673.5	gi|15920408|ref|NP_376077.1|	-	0.005	16.4	0.1	0.4	10.3	0.0	2.4	2	0	0	2	2	2	1	Type-F	conjugative	transfer	system	pilin	assembly	protein
DUF836	PF05768.9	gi|15920408|ref|NP_376077.1|	-	0.0055	16.9	0.1	2.4	8.5	0.1	2.5	2	0	0	2	2	2	1	Glutaredoxin-like	domain	(DUF836)
Thioredoxin_8	PF13905.1	gi|15920408|ref|NP_376077.1|	-	0.017	15.2	0.1	18	5.5	0.0	3.5	2	1	0	2	2	2	0	Thioredoxin-like
PDDEXK_1	PF12705.2	gi|15920408|ref|NP_376077.1|	-	0.029	13.7	0.1	1.2	8.5	0.0	2.2	2	0	0	2	2	2	0	PD-(D/E)XK	nuclease	superfamily
HyaE	PF07449.6	gi|15920408|ref|NP_376077.1|	-	0.11	12.4	0.0	22	5.0	0.0	2.5	2	0	0	2	2	2	0	Hydrogenase-1	expression	protein	HyaE
Thioredoxin_4	PF13462.1	gi|15920408|ref|NP_376077.1|	-	0.46	10.4	9.1	1.4	8.9	0.2	3.5	2	2	1	4	4	4	0	Thioredoxin
AMMECR1	PF01871.12	gi|15920409|ref|NP_376078.1|	-	2.2e-57	192.9	0.0	2.7e-57	192.6	0.0	1.1	1	0	0	1	1	1	1	AMMECR1
Mut7-C	PF01927.11	gi|15920410|ref|NP_376079.1|	-	8.9e-42	142.5	7.5	3.1e-40	137.5	5.2	2.0	1	1	0	1	1	1	1	Mut7-C	RNAse	domain
OrfB_Zn_ribbon	PF07282.6	gi|15920410|ref|NP_376079.1|	-	0.013	15.0	0.2	0.023	14.3	0.1	1.5	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
IBR	PF01485.16	gi|15920410|ref|NP_376079.1|	-	0.022	14.6	1.3	0.046	13.5	0.9	1.5	1	0	0	1	1	1	0	IBR	domain
Rep_fac-A_C	PF08646.5	gi|15920410|ref|NP_376079.1|	-	0.029	14.0	2.3	0.045	13.4	1.6	1.3	1	0	0	1	1	1	0	Replication	factor-A	C	terminal	domain
HypA	PF01155.14	gi|15920410|ref|NP_376079.1|	-	0.058	13.0	0.3	0.07	12.8	0.2	1.3	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
DUF2296	PF10058.4	gi|15920410|ref|NP_376079.1|	-	0.11	12.2	1.4	0.24	11.1	1.0	1.5	1	0	0	1	1	1	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
RNA_POL_M_15KD	PF02150.11	gi|15920410|ref|NP_376079.1|	-	0.24	11.1	1.7	0.49	10.1	1.2	1.5	1	0	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
SprT-like	PF10263.4	gi|15920410|ref|NP_376079.1|	-	0.26	10.9	2.6	8	6.1	0.0	2.1	1	1	1	2	2	2	0	SprT-like	family
zinc_ribbon_2	PF13240.1	gi|15920410|ref|NP_376079.1|	-	0.36	10.3	3.4	0.64	9.5	0.6	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
Zn-ribbon_8	PF09723.5	gi|15920410|ref|NP_376079.1|	-	0.6	10.1	3.7	3	7.8	2.7	2.0	1	1	1	2	2	2	0	Zinc	ribbon	domain
A2L_zn_ribbon	PF08792.5	gi|15920410|ref|NP_376079.1|	-	2.3	7.8	6.2	3.1	7.3	1.3	2.3	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
YoqO	PF14037.1	gi|15920411|ref|NP_376080.1|	-	0.16	12.0	9.0	0.2	11.7	6.3	1.2	1	0	0	1	1	1	0	YoqO-like	protein
DUF3021	PF11457.3	gi|15920411|ref|NP_376080.1|	-	0.26	11.1	11.7	0.31	10.9	8.1	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3021)
SdpI	PF13630.1	gi|15920411|ref|NP_376080.1|	-	1.3	8.7	14.4	0.54	10.0	5.9	2.0	2	0	0	2	2	2	0	SdpI/YhfL	protein	family
DUF4418	PF14387.1	gi|15920411|ref|NP_376080.1|	-	1.3	8.7	4.2	0.76	9.5	0.7	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4418)
RseC_MucC	PF04246.7	gi|15920411|ref|NP_376080.1|	-	2	7.9	6.7	4.2	6.9	4.2	1.7	1	1	1	2	2	2	0	Positive	regulator	of	sigma(E),	RseC/MucC
DUF2207	PF09972.4	gi|15920411|ref|NP_376080.1|	-	2.2	6.7	9.2	0.72	8.3	5.0	1.3	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
2TM	PF13239.1	gi|15920411|ref|NP_376080.1|	-	2.9	7.9	10.4	1.1	9.3	5.4	1.5	1	1	0	1	1	1	0	2TM	domain
FbpA	PF05833.6	gi|15920412|ref|NP_376081.1|	-	1e-35	123.2	24.8	1.5e-35	122.6	17.2	1.2	1	0	0	1	1	1	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
DUF814	PF05670.8	gi|15920412|ref|NP_376081.1|	-	6.7e-29	99.6	0.0	1.8e-28	98.2	0.0	1.8	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF814)
Syntaxin-6_N	PF09177.6	gi|15920412|ref|NP_376081.1|	-	0.39	11.1	12.1	0.41	11.0	0.8	2.8	2	0	0	2	2	2	0	Syntaxin	6,	N-terminal
Tweety	PF04906.8	gi|15920412|ref|NP_376081.1|	-	1.3	7.3	5.4	0.35	9.2	1.1	1.7	1	1	1	2	2	2	0	Tweety
Fzo_mitofusin	PF04799.8	gi|15920412|ref|NP_376081.1|	-	2.1	7.7	9.4	5.3	6.3	0.3	2.5	2	0	0	2	2	2	0	fzo-like	conserved	region
EMP24_GP25L	PF01105.19	gi|15920412|ref|NP_376081.1|	-	3.3	7.3	16.6	5.7	6.6	4.4	2.4	1	1	1	2	2	2	0	emp24/gp25L/p24	family/GOLD
AKNA	PF12443.3	gi|15920412|ref|NP_376081.1|	-	3.7	7.6	7.3	1.5	8.8	0.6	2.4	2	0	0	2	2	2	0	AT-hook-containing	transcription	factor
OmpH	PF03938.9	gi|15920412|ref|NP_376081.1|	-	6.9	6.5	17.6	3.4	7.5	3.7	2.7	3	0	0	3	3	3	0	Outer	membrane	protein	(OmpH-like)
CCDC-167	PF15188.1	gi|15920412|ref|NP_376081.1|	-	9.4	6.2	17.2	0.72	9.8	2.6	3.3	3	0	0	3	3	3	0	Coiled-coil	domain-containing	protein	167
DUF883	PF05957.8	gi|15920412|ref|NP_376081.1|	-	9.4	6.7	6.4	1.5	9.2	0.6	2.1	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF883)
RIO1	PF01163.17	gi|15920414|ref|NP_376083.1|	-	6.7e-39	133.1	0.5	1e-38	132.5	0.1	1.4	2	0	0	2	2	2	1	RIO1	family
Rio2_N	PF09202.6	gi|15920414|ref|NP_376083.1|	-	1e-13	51.1	0.8	3e-13	49.6	0.5	1.7	1	0	0	1	1	1	1	Rio2,	N-terminal
APH	PF01636.18	gi|15920414|ref|NP_376083.1|	-	3.7e-06	26.8	0.0	0.00042	20.1	0.0	2.2	2	0	0	2	2	2	2	Phosphotransferase	enzyme	family
Pkinase	PF00069.20	gi|15920414|ref|NP_376083.1|	-	3.8e-06	26.2	0.0	6.8e-06	25.4	0.0	1.3	1	0	0	1	1	1	1	Protein	kinase	domain
Choline_kinase	PF01633.15	gi|15920414|ref|NP_376083.1|	-	0.014	14.9	0.2	6.4	6.2	0.0	2.6	2	1	1	3	3	3	0	Choline/ethanolamine	kinase
Kdo	PF06293.9	gi|15920414|ref|NP_376083.1|	-	0.015	14.3	0.1	4	6.4	0.0	2.3	2	0	0	2	2	2	0	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
DUF460	PF04312.8	gi|15920415|ref|NP_376084.1|	-	1.2e-51	173.8	1.8	4.9e-51	171.8	0.3	2.4	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF460)
Fib_alpha	PF08702.5	gi|15920415|ref|NP_376084.1|	-	0.00084	19.4	12.7	0.0014	18.7	8.1	1.9	2	0	0	2	2	1	1	Fibrinogen	alpha/beta	chain	family
DUF869	PF05911.6	gi|15920415|ref|NP_376084.1|	-	0.015	13.5	6.6	0.022	13.0	4.6	1.2	1	0	0	1	1	1	0	Plant	protein	of	unknown	function	(DUF869)
Effector_1	PF04518.7	gi|15920415|ref|NP_376084.1|	-	0.024	13.6	4.3	0.039	12.9	3.0	1.3	1	0	0	1	1	1	0	Effector	from	type	III	secretion	system
CotH	PF08757.6	gi|15920415|ref|NP_376084.1|	-	0.032	13.4	2.7	0.054	12.7	1.9	1.3	1	0	0	1	1	1	0	CotH	protein
Herpes_UL92	PF03048.9	gi|15920415|ref|NP_376084.1|	-	0.063	12.8	5.5	0.14	11.7	3.8	1.5	1	0	0	1	1	1	0	UL92	family
DivIC	PF04977.10	gi|15920415|ref|NP_376084.1|	-	0.12	11.9	10.1	2.1	7.8	0.1	2.9	2	0	0	2	2	2	0	Septum	formation	initiator
DUF848	PF05852.6	gi|15920415|ref|NP_376084.1|	-	0.19	11.5	10.5	0.59	9.9	3.2	2.8	1	1	1	2	2	2	0	Gammaherpesvirus	protein	of	unknown	function	(DUF848)
DUF4200	PF13863.1	gi|15920415|ref|NP_376084.1|	-	0.23	11.3	19.5	1.1	9.1	7.2	2.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4200)
DUF1664	PF07889.7	gi|15920415|ref|NP_376084.1|	-	0.69	9.7	7.4	13	5.6	0.2	3.6	3	1	1	4	4	4	0	Protein	of	unknown	function	(DUF1664)
IncA	PF04156.9	gi|15920415|ref|NP_376084.1|	-	1.1	8.8	7.8	2.9	7.4	5.4	1.7	1	0	0	1	1	1	0	IncA	protein
V_ATPase_I	PF01496.14	gi|15920415|ref|NP_376084.1|	-	2.4	5.8	11.4	2.8	5.6	6.8	1.7	1	1	0	2	2	2	0	V-type	ATPase	116kDa	subunit	family
Prefoldin_2	PF01920.15	gi|15920415|ref|NP_376084.1|	-	4.7	7.0	16.9	0.61	9.8	1.4	3.2	2	1	1	3	3	3	0	Prefoldin	subunit
AdoMet_Synthase	PF01941.14	gi|15920416|ref|NP_376085.1|	-	8.5e-174	577.6	7.2	9.6e-174	577.5	5.0	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	synthetase	(AdoMet	synthetase)
LSM	PF01423.17	gi|15920417|ref|NP_376086.1|	-	5.6e-19	67.4	0.1	6.9e-19	67.1	0.1	1.1	1	0	0	1	1	1	1	LSM	domain
HTH_5	PF01022.15	gi|15920419|ref|NP_376088.1|	-	1.7e-13	49.9	1.5	1.4e-12	47.0	0.5	2.1	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|15920419|ref|NP_376088.1|	-	5.4e-09	35.7	0.1	7.4e-09	35.2	0.1	1.1	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|15920419|ref|NP_376088.1|	-	1.9e-08	33.5	0.7	3.3e-08	32.7	0.5	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_34	PF13601.1	gi|15920419|ref|NP_376088.1|	-	2.6e-07	30.5	0.3	3.8e-07	30.0	0.2	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|15920419|ref|NP_376088.1|	-	7.1e-07	28.8	0.0	1e-06	28.3	0.0	1.3	1	1	0	1	1	1	1	MarR	family
MarR	PF01047.17	gi|15920419|ref|NP_376088.1|	-	1.2e-05	24.9	0.2	1.8e-05	24.3	0.2	1.4	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|15920419|ref|NP_376088.1|	-	1.6e-05	24.5	0.2	2.9e-05	23.6	0.1	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
Cdc6_C	PF09079.6	gi|15920419|ref|NP_376088.1|	-	0.0001	21.9	0.4	0.00057	19.5	0.1	1.9	1	1	1	2	2	2	1	CDC6,	C	terminal
HTH_11	PF08279.7	gi|15920419|ref|NP_376088.1|	-	0.00048	19.7	0.3	0.00097	18.7	0.1	1.6	1	1	0	1	1	1	1	HTH	domain
HTH_1	PF00126.22	gi|15920419|ref|NP_376088.1|	-	0.00063	19.4	0.0	0.00091	18.9	0.0	1.2	1	0	0	1	1	1	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
HTH_27	PF13463.1	gi|15920419|ref|NP_376088.1|	-	0.0007	19.8	0.0	0.00096	19.4	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_IclR	PF09339.5	gi|15920419|ref|NP_376088.1|	-	0.0013	18.2	0.1	0.0023	17.4	0.0	1.4	1	1	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_Crp_2	PF13545.1	gi|15920419|ref|NP_376088.1|	-	0.0041	16.8	2.9	0.028	14.1	1.9	2.2	1	1	0	1	1	1	1	Crp-like	helix-turn-helix	domain
Hpr_kinase_C	PF07475.7	gi|15920419|ref|NP_376088.1|	-	0.0053	16.0	1.2	0.0062	15.8	0.8	1.0	1	0	0	1	1	1	1	HPr	Serine	kinase	C-terminal	domain
ArsR	PF09824.4	gi|15920419|ref|NP_376088.1|	-	0.017	14.4	0.2	0.019	14.2	0.1	1.1	1	0	0	1	1	1	0	ArsR	transcriptional	regulator
DUF2250	PF10007.4	gi|15920419|ref|NP_376088.1|	-	0.017	15.0	0.9	0.021	14.7	0.6	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF2513	PF10711.4	gi|15920419|ref|NP_376088.1|	-	0.018	15.1	0.2	0.022	14.8	0.1	1.3	1	0	0	1	1	1	0	Hypothetical	protein	(DUF2513)
Fe_dep_repress	PF01325.14	gi|15920419|ref|NP_376088.1|	-	0.024	14.5	0.1	0.047	13.6	0.0	1.5	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Sigma70_r4_2	PF08281.7	gi|15920419|ref|NP_376088.1|	-	0.03	13.7	0.2	0.056	12.9	0.2	1.5	1	0	0	1	1	1	0	Sigma-70,	region	4
Rrf2	PF02082.15	gi|15920419|ref|NP_376088.1|	-	0.031	14.4	0.3	0.042	13.9	0.2	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
Phage_rep_org_N	PF09681.5	gi|15920419|ref|NP_376088.1|	-	0.031	13.8	1.5	0.075	12.6	0.7	1.7	1	1	1	2	2	2	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
HTH_28	PF13518.1	gi|15920419|ref|NP_376088.1|	-	0.071	13.1	0.0	0.12	12.4	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_DeoR	PF08220.7	gi|15920419|ref|NP_376088.1|	-	0.14	11.7	0.0	0.22	11.0	0.0	1.5	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
CTP_synth_N	PF06418.9	gi|161751103|ref|NP_376089.2|	-	3.1e-127	423.3	2.7	4.2e-127	422.9	1.9	1.2	1	0	0	1	1	1	1	CTP	synthase	N-terminus
GATase	PF00117.23	gi|161751103|ref|NP_376089.2|	-	4.1e-52	176.4	0.0	8.2e-52	175.4	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|161751103|ref|NP_376089.2|	-	2e-14	53.5	0.0	3e-13	49.7	0.0	2.1	1	1	1	2	2	2	1	Peptidase	C26
CbiA	PF01656.18	gi|161751103|ref|NP_376089.2|	-	4e-07	29.6	0.0	7.6e-07	28.7	0.0	1.5	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ArsA_ATPase	PF02374.10	gi|161751103|ref|NP_376089.2|	-	0.001	18.1	1.4	0.075	12.0	0.0	2.4	2	0	0	2	2	2	2	Anion-transporting	ATPase
OMPdecase	PF00215.19	gi|15920421|ref|NP_376090.1|	-	1.1e-22	80.5	5.4	1.3e-22	80.3	3.7	1.1	1	0	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
NanE	PF04131.9	gi|15920421|ref|NP_376090.1|	-	2.4e-07	29.9	1.7	4.4e-06	25.7	0.3	2.2	1	1	0	2	2	2	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
DUF556	PF04476.8	gi|15920421|ref|NP_376090.1|	-	6.8e-05	22.1	6.8	0.093	11.9	0.1	3.1	1	1	0	3	3	3	2	Protein	of	unknown	function	(DUF556)
QRPTase_C	PF01729.14	gi|15920421|ref|NP_376090.1|	-	0.00025	20.6	3.1	0.00087	18.8	1.1	2.2	1	1	1	2	2	2	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
TIM-br_sig_trns	PF09370.5	gi|15920421|ref|NP_376090.1|	-	0.0019	17.2	2.0	0.026	13.5	0.1	2.1	1	1	1	2	2	2	1	TIM-barrel	signal	transduction	protein
DeoC	PF01791.4	gi|15920421|ref|NP_376090.1|	-	0.014	14.6	1.4	0.87	8.8	0.3	2.5	1	1	1	2	2	2	0	DeoC/LacD	family	aldolase
Ribul_P_3_epim	PF00834.14	gi|15920421|ref|NP_376090.1|	-	0.026	13.6	2.0	0.13	11.3	0.2	2.4	2	1	0	2	2	2	0	Ribulose-phosphate	3	epimerase	family
DUF2153	PF09921.4	gi|15920423|ref|NP_376092.1|	-	2e-48	163.2	4.3	2.2e-48	163.0	3.0	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2153)
FAM91_N	PF14647.1	gi|15920423|ref|NP_376092.1|	-	0.093	11.7	0.1	0.11	11.4	0.1	1.1	1	0	0	1	1	1	0	FAM91	N-terminus
zf-CpG_bind_C	PF12269.3	gi|15920423|ref|NP_376092.1|	-	0.18	11.2	1.2	0.14	11.5	0.2	1.4	2	0	0	2	2	2	0	CpG	binding	protein	zinc	finger	C	terminal	domain
Trm112p	PF03966.11	gi|15920424|ref|NP_376093.1|	-	5.7e-21	74.6	2.4	8.1e-21	74.1	1.7	1.2	1	0	0	1	1	1	1	Trm112p-like	protein
zf-UDP	PF14569.1	gi|15920424|ref|NP_376093.1|	-	0.02	14.6	0.2	0.02	14.6	0.2	1.8	1	1	0	2	2	2	0	Zinc-binding	RING-finger
zf-ribbon_3	PF13248.1	gi|15920424|ref|NP_376093.1|	-	0.035	13.3	1.7	0.035	13.3	1.1	2.5	3	0	0	3	3	3	0	zinc-ribbon	domain
Thioredoxin_9	PF14595.1	gi|15920424|ref|NP_376093.1|	-	0.093	12.3	0.0	0.14	11.7	0.0	1.3	1	0	0	1	1	1	0	Thioredoxin
Zn_ribbon_recom	PF13408.1	gi|15920424|ref|NP_376093.1|	-	0.57	10.4	4.9	2.2	8.6	0.1	2.6	1	1	1	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
Auto_anti-p27	PF06677.7	gi|15920424|ref|NP_376093.1|	-	0.77	9.5	5.8	3.9	7.3	1.5	2.5	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zf-RING_5	PF14634.1	gi|15920424|ref|NP_376093.1|	-	3	7.6	6.0	6.9	6.4	1.0	2.4	2	0	0	2	2	2	0	zinc-RING	finger	domain
Sgf11	PF08209.6	gi|15920424|ref|NP_376093.1|	-	4.8	6.5	5.9	2.5	7.4	0.2	2.7	3	0	0	3	3	3	0	Sgf11	(transcriptional	regulation	protein)
RRN7	PF11781.3	gi|15920424|ref|NP_376093.1|	-	5.5	6.5	5.6	4.3	6.9	1.0	2.8	3	1	0	3	3	3	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
PGM_PMM_I	PF02878.11	gi|15920425|ref|NP_376094.1|	-	6.5e-45	152.0	0.0	1.3e-44	151.0	0.0	1.5	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_II	PF02879.11	gi|15920425|ref|NP_376094.1|	-	2.7e-21	75.8	0.0	6e-21	74.7	0.0	1.6	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_III	PF02880.11	gi|15920425|ref|NP_376094.1|	-	2.9e-19	69.1	0.0	6.2e-19	68.1	0.0	1.6	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_IV	PF00408.15	gi|15920425|ref|NP_376094.1|	-	2.1e-12	46.8	0.1	9.4e-12	44.7	0.0	2.2	2	0	0	2	2	2	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
Laminin_II	PF06009.7	gi|15920426|ref|NP_376095.1|	-	0.0072	16.0	9.3	0.01	15.5	6.5	1.3	1	0	0	1	1	1	1	Laminin	Domain	II
Cmyb_C	PF09316.5	gi|15920426|ref|NP_376095.1|	-	0.017	14.7	4.9	0.021	14.5	3.4	1.1	1	0	0	1	1	1	0	C-myb,	C-terminal
YscO	PF07321.7	gi|15920426|ref|NP_376095.1|	-	0.024	14.4	5.3	0.034	13.9	3.7	1.3	1	0	0	1	1	1	0	Type	III	secretion	protein	YscO
Tropomyosin	PF00261.15	gi|15920426|ref|NP_376095.1|	-	0.024	13.7	8.2	0.031	13.3	5.7	1.2	1	0	0	1	1	1	0	Tropomyosin
MCPsignal	PF00015.16	gi|15920426|ref|NP_376095.1|	-	0.026	14.0	1.4	0.029	13.8	1.0	1.1	1	0	0	1	1	1	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
Cor1	PF04803.7	gi|15920426|ref|NP_376095.1|	-	0.037	13.8	8.6	0.039	13.7	6.0	1.1	1	0	0	1	1	1	0	Cor1/Xlr/Xmr	conserved	region
Xpo1	PF08389.7	gi|15920426|ref|NP_376095.1|	-	0.044	13.6	1.9	0.047	13.6	1.3	1.1	1	0	0	1	1	1	0	Exportin	1-like	protein
DUF745	PF05335.8	gi|15920426|ref|NP_376095.1|	-	0.049	13.1	1.7	0.051	13.0	1.2	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF745)
GlutR_N	PF05201.10	gi|15920426|ref|NP_376095.1|	-	0.057	13.0	0.9	0.093	12.3	0.7	1.3	1	0	0	1	1	1	0	Glutamyl-tRNAGlu	reductase,	N-terminal	domain
Histone_HNS	PF00816.16	gi|15920426|ref|NP_376095.1|	-	0.059	13.8	9.8	0.16	12.4	1.0	2.1	1	1	1	2	2	2	0	H-NS	histone	family
DUF3461	PF11944.3	gi|15920426|ref|NP_376095.1|	-	0.074	12.8	12.0	0.41	10.4	1.6	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3461)
Z1	PF10593.4	gi|15920426|ref|NP_376095.1|	-	0.079	12.1	3.1	0.094	11.9	2.1	1.0	1	0	0	1	1	1	0	Z1	domain
DUF1759	PF03564.10	gi|15920426|ref|NP_376095.1|	-	0.1	12.4	5.4	0.17	11.6	3.6	1.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1759)
DUF2854	PF11016.3	gi|15920426|ref|NP_376095.1|	-	0.11	12.0	3.1	0.55	9.7	1.9	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2854)
Endotoxin_N	PF03945.9	gi|15920426|ref|NP_376095.1|	-	0.12	11.6	2.0	0.14	11.5	1.4	1.1	1	0	0	1	1	1	0	delta	endotoxin,	N-terminal	domain
Bromodomain	PF00439.20	gi|15920426|ref|NP_376095.1|	-	0.13	12.1	4.7	0.65	9.9	0.3	2.2	1	1	1	2	2	2	0	Bromodomain
IFT46_B_C	PF12317.3	gi|15920426|ref|NP_376095.1|	-	0.14	11.5	2.3	0.15	11.3	1.6	1.2	1	0	0	1	1	1	0	Intraflagellar	transport	complex	B	protein	46	C	terminal
TraH	PF06122.6	gi|15920426|ref|NP_376095.1|	-	0.18	10.5	1.8	0.2	10.4	1.2	1.0	1	0	0	1	1	1	0	Conjugative	relaxosome	accessory	transposon	protein
IncA	PF04156.9	gi|15920426|ref|NP_376095.1|	-	0.19	11.3	7.0	0.19	11.2	4.9	1.1	1	0	0	1	1	1	0	IncA	protein
Cortex-I_coil	PF09304.5	gi|15920426|ref|NP_376095.1|	-	0.21	11.6	13.0	0.25	11.3	9.0	1.2	1	0	0	1	1	1	0	Cortexillin	I,	coiled	coil
DUF2115	PF09888.4	gi|15920426|ref|NP_376095.1|	-	0.22	11.6	5.2	0.26	11.3	3.6	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2115)
Orbi_VP3	PF01700.11	gi|15920426|ref|NP_376095.1|	-	0.3	8.4	2.2	0.35	8.2	1.6	1.0	1	0	0	1	1	1	0	Orbivirus	VP3	(T2)	protein
DUF3987	PF13148.1	gi|15920426|ref|NP_376095.1|	-	0.34	9.4	2.6	0.41	9.1	1.8	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3987)
GlutR_dimer	PF00745.15	gi|15920426|ref|NP_376095.1|	-	0.42	10.5	5.5	0.66	9.9	3.8	1.6	1	1	0	1	1	1	0	Glutamyl-tRNAGlu	reductase,	dimerisation	domain
Topo-VIb_trans	PF09239.6	gi|15920426|ref|NP_376095.1|	-	0.48	9.9	3.6	0.65	9.5	2.5	1.2	1	0	0	1	1	1	0	Topoisomerase	VI	B	subunit,	transducer
Nup88	PF10168.4	gi|15920426|ref|NP_376095.1|	-	0.54	8.0	7.8	0.54	8.0	5.4	1.0	1	0	0	1	1	1	0	Nuclear	pore	component
DUF4404	PF14357.1	gi|15920426|ref|NP_376095.1|	-	0.56	10.6	4.5	0.93	9.9	1.7	1.8	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4404)
Mitofilin	PF09731.4	gi|15920426|ref|NP_376095.1|	-	0.56	8.7	10.8	0.55	8.8	7.5	1.0	1	0	0	1	1	1	0	Mitochondrial	inner	membrane	protein
Nebulin	PF00880.13	gi|15920426|ref|NP_376095.1|	-	0.59	9.8	0.2	0.59	9.8	0.1	2.8	3	0	0	3	3	2	0	Nebulin	repeat
YkuI_C	PF10388.4	gi|15920426|ref|NP_376095.1|	-	0.61	9.7	6.7	0.6	9.7	4.2	1.3	1	1	0	1	1	1	0	EAL-domain	associated	signalling	protein	domain
ALMT	PF11744.3	gi|15920426|ref|NP_376095.1|	-	0.67	8.5	4.9	0.72	8.4	3.4	1.1	1	0	0	1	1	1	0	Aluminium	activated	malate	transporter
LUC7	PF03194.10	gi|15920426|ref|NP_376095.1|	-	0.85	9.0	5.9	1	8.8	4.1	1.1	1	0	0	1	1	1	0	LUC7	N_terminus
TMF_TATA_bd	PF12325.3	gi|15920426|ref|NP_376095.1|	-	0.88	9.3	9.2	1.4	8.7	6.3	1.3	1	0	0	1	1	1	0	TATA	element	modulatory	factor	1	TATA	binding
V_ATPase_I	PF01496.14	gi|15920426|ref|NP_376095.1|	-	1.2	6.8	6.8	1.2	6.9	4.7	1.0	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
SRPRB	PF09439.5	gi|15920426|ref|NP_376095.1|	-	1.5	8.0	8.6	3.8	6.6	5.6	1.9	1	1	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
PIN_2	PF10130.4	gi|15920426|ref|NP_376095.1|	-	1.9	8.5	6.5	9.6	6.2	0.6	2.1	1	1	1	2	2	2	0	PIN	domain
Fib_alpha	PF08702.5	gi|15920426|ref|NP_376095.1|	-	1.9	8.5	9.5	2.7	8.1	6.6	1.3	1	1	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
MRP-L47	PF06984.8	gi|15920426|ref|NP_376095.1|	-	2.1	8.2	6.4	6.1	6.8	2.0	2.2	1	1	1	2	2	2	0	Mitochondrial	39-S	ribosomal	protein	L47	(MRP-L47)
IL2	PF00715.12	gi|15920426|ref|NP_376095.1|	-	2.6	7.7	6.1	5.7	6.6	0.6	2.0	1	1	1	2	2	2	0	Interleukin	2
Casc1	PF12366.3	gi|15920426|ref|NP_376095.1|	-	2.9	7.3	7.3	5.8	6.3	0.2	2.1	1	1	1	2	2	2	0	Cancer	susceptibility	candidate	1
IL22	PF14565.1	gi|15920426|ref|NP_376095.1|	-	3.2	7.8	8.3	5.1	7.1	1.3	2.0	1	1	1	2	2	2	0	Interleukin	22	IL-10-related	T-cell-derived-inducible	factor
Clusterin	PF01093.12	gi|15920426|ref|NP_376095.1|	-	3.7	6.2	10.7	13	4.4	0.0	2.1	1	1	1	2	2	2	0	Clusterin
Peptidase_S49_N	PF08496.5	gi|15920426|ref|NP_376095.1|	-	4.5	7.0	9.5	5.3	6.8	6.6	1.0	1	0	0	1	1	1	0	Peptidase	family	S49	N-terminal
Syntaxin	PF00804.20	gi|15920426|ref|NP_376095.1|	-	4.8	7.3	13.0	1.4e+02	2.7	8.8	2.2	1	1	0	1	1	1	0	Syntaxin
TMPIT	PF07851.8	gi|15920426|ref|NP_376095.1|	-	5.3	6.0	7.2	5.6	5.9	5.0	1.1	1	0	0	1	1	1	0	TMPIT-like	protein
FlaC_arch	PF05377.6	gi|15920426|ref|NP_376095.1|	-	7.4	6.5	8.8	2.8	7.9	1.0	2.6	1	1	2	3	3	3	0	Flagella	accessory	protein	C	(FlaC)
DUF711	PF05167.7	gi|15920428|ref|NP_376097.1|	-	5.4e-136	453.4	2.2	6.4e-136	453.2	1.5	1.0	1	0	0	1	1	1	1	Uncharacterised	ACR	(DUF711)
DUF374	PF04028.8	gi|15920428|ref|NP_376097.1|	-	0.13	11.4	2.7	2.1	7.6	0.2	2.8	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF374)
DUF2648	PF10855.3	gi|15920430|ref|NP_376099.1|	-	0.061	12.7	0.1	0.15	11.5	0.1	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2648)
DDE_Tnp_2	PF04693.7	gi|15920431|ref|NP_376100.1|	-	3.6e-35	121.5	0.5	4.4e-35	121.2	0.3	1.1	1	0	0	1	1	1	1	Archaeal	putative	transposase	ISC1217
B-block_TFIIIC	PF04182.7	gi|15920431|ref|NP_376100.1|	-	0.07	12.9	0.6	0.13	12.1	0.2	1.7	2	0	0	2	2	2	0	B-block	binding	subunit	of	TFIIIC
DDE_Tnp_2	PF04693.7	gi|15920432|ref|NP_376101.1|	-	2.5e-73	246.9	0.5	3e-73	246.6	0.4	1.1	1	0	0	1	1	1	1	Archaeal	putative	transposase	ISC1217
DDE_Tnp_1	PF01609.16	gi|15920432|ref|NP_376101.1|	-	3.9e-05	23.3	0.0	4.1e-05	23.2	0.0	1.2	1	0	0	1	1	1	1	Transposase	DDE	domain
AAR2	PF05282.6	gi|15920433|ref|NP_376102.1|	-	0.042	12.7	3.7	0.052	12.4	2.5	1.1	1	0	0	1	1	1	0	AAR2	protein
Opi1	PF08618.5	gi|15920433|ref|NP_376102.1|	-	0.086	11.7	3.8	0.11	11.3	2.6	1.2	1	0	0	1	1	1	0	Transcription	factor	Opi1
RP-C_C	PF11800.3	gi|15920433|ref|NP_376102.1|	-	0.5	10.0	3.8	0.58	9.8	2.6	1.2	1	0	0	1	1	1	0	Replication	protein	C	C-terminal	region
ParBc	PF02195.13	gi|15920434|ref|NP_376103.1|	-	9.7e-10	38.4	0.0	1.1e-09	38.2	0.0	1.0	1	0	0	1	1	1	1	ParB-like	nuclease	domain
HTH_45	PF14947.1	gi|15920435|ref|NP_376104.1|	-	3.6e-10	39.4	1.4	4.7e-10	39.1	0.9	1.1	1	0	0	1	1	1	1	Winged	helix-turn-helix
TrmB	PF01978.14	gi|15920435|ref|NP_376104.1|	-	7e-05	22.4	0.1	0.00011	21.8	0.1	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
Rrf2	PF02082.15	gi|15920435|ref|NP_376104.1|	-	0.00069	19.6	0.0	0.00072	19.6	0.0	1.2	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_24	PF13412.1	gi|15920435|ref|NP_376104.1|	-	0.0015	17.9	0.0	0.0027	17.0	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_27	PF13463.1	gi|15920435|ref|NP_376104.1|	-	0.0074	16.5	0.0	0.034	14.4	0.0	1.8	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
MotA_activ	PF09114.5	gi|15920435|ref|NP_376104.1|	-	0.0094	15.6	0.1	0.011	15.4	0.1	1.1	1	0	0	1	1	1	1	Transcription	factor	MotA,	activation	domain
HTH_IclR	PF09339.5	gi|15920435|ref|NP_376104.1|	-	0.0094	15.5	0.0	0.016	14.7	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
DUF4364	PF14277.1	gi|15920435|ref|NP_376104.1|	-	0.012	15.2	0.2	0.015	14.9	0.2	1.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4364)
HTH_DeoR	PF08220.7	gi|15920435|ref|NP_376104.1|	-	0.037	13.5	0.0	0.058	12.9	0.0	1.4	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
DUF2250	PF10007.4	gi|15920435|ref|NP_376104.1|	-	0.045	13.6	0.1	0.13	12.2	0.1	1.6	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
RNA_polI_A14	PF08203.6	gi|15920435|ref|NP_376104.1|	-	0.091	13.0	0.1	0.19	11.9	0.1	1.5	1	0	0	1	1	1	0	Yeast	RNA	polymerase	I	subunit	RPA14
HTH_43	PF09904.4	gi|15920435|ref|NP_376104.1|	-	0.14	12.0	0.0	0.23	11.2	0.0	1.5	1	1	0	1	1	1	0	Winged	helix-turn	helix
DUF3488	PF11992.3	gi|15920436|ref|NP_376105.1|	-	1.2	7.6	3.9	1.3	7.5	2.7	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3488)
AAR2	PF05282.6	gi|15920436|ref|NP_376105.1|	-	1.6	7.6	6.7	1.7	7.5	4.7	1.0	1	0	0	1	1	1	0	AAR2	protein
HTH_IclR	PF09339.5	gi|15920437|ref|NP_376106.1|	-	1.3e-05	24.7	0.3	3.1e-05	23.4	0.1	1.8	2	1	0	2	2	2	1	IclR	helix-turn-helix	domain
MarR_2	PF12802.2	gi|15920437|ref|NP_376106.1|	-	1.3e-05	24.7	0.1	2.2e-05	24.0	0.1	1.4	1	0	0	1	1	1	1	MarR	family
HTH_34	PF13601.1	gi|15920437|ref|NP_376106.1|	-	1.5e-05	24.8	0.1	2e-05	24.5	0.1	1.1	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_27	PF13463.1	gi|15920437|ref|NP_376106.1|	-	3e-05	24.2	0.1	4.8e-05	23.5	0.1	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_9	PF08221.6	gi|15920437|ref|NP_376106.1|	-	6.4e-05	22.7	0.1	0.00013	21.7	0.1	1.5	1	0	0	1	1	1	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
TrmB	PF01978.14	gi|15920437|ref|NP_376106.1|	-	6.9e-05	22.4	0.9	9.9e-05	21.9	0.4	1.4	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
PadR	PF03551.9	gi|15920437|ref|NP_376106.1|	-	0.00013	21.6	0.2	0.00017	21.2	0.1	1.2	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_24	PF13412.1	gi|15920437|ref|NP_376106.1|	-	0.00024	20.4	0.8	0.00045	19.5	0.6	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HxlR	PF01638.12	gi|15920437|ref|NP_376106.1|	-	0.00074	19.1	0.5	0.0011	18.5	0.3	1.4	1	1	0	1	1	1	1	HxlR-like	helix-turn-helix
Rrf2	PF02082.15	gi|15920437|ref|NP_376106.1|	-	0.00085	19.3	0.6	0.0016	18.5	0.1	1.5	2	0	0	2	2	2	1	Transcriptional	regulator
HTH_20	PF12840.2	gi|15920437|ref|NP_376106.1|	-	0.0019	17.9	0.3	0.004	16.9	0.2	1.6	1	1	0	1	1	1	1	Helix-turn-helix	domain
RPA_C	PF08784.6	gi|15920437|ref|NP_376106.1|	-	0.004	17.5	0.0	0.0065	16.8	0.0	1.4	1	0	0	1	1	1	1	Replication	protein	A	C	terminal
SpoU_methylase	PF00588.14	gi|15920437|ref|NP_376106.1|	-	0.0066	16.3	0.0	0.081	12.7	0.0	1.9	1	1	1	2	2	2	1	SpoU	rRNA	Methylase	family
MarR	PF01047.17	gi|15920437|ref|NP_376106.1|	-	0.0079	15.8	0.1	0.013	15.2	0.1	1.4	1	0	0	1	1	1	1	MarR	family
Penicillinase_R	PF03965.11	gi|15920437|ref|NP_376106.1|	-	0.015	15.3	0.4	0.018	15.1	0.3	1.1	1	0	0	1	1	1	0	Penicillinase	repressor
HTH_19	PF12844.2	gi|15920437|ref|NP_376106.1|	-	0.039	14.0	0.3	0.081	12.9	0.1	1.8	2	1	0	2	2	1	0	Helix-turn-helix	domain
HTH_41	PF14502.1	gi|15920437|ref|NP_376106.1|	-	0.042	13.4	0.4	0.21	11.2	0.0	2.0	2	0	0	2	2	2	0	Helix-turn-helix	domain
Shugoshin_N	PF07558.6	gi|15920437|ref|NP_376106.1|	-	0.044	13.5	1.2	0.19	11.4	0.1	2.3	2	0	0	2	2	2	0	Shugoshin	N-terminal	coiled-coil	region
GPP34	PF05719.6	gi|15920437|ref|NP_376106.1|	-	0.045	13.8	0.3	0.046	13.7	0.2	1.1	1	0	0	1	1	1	0	Golgi	phosphoprotein	3	(GPP34)
Phage_rep_org_N	PF09681.5	gi|15920437|ref|NP_376106.1|	-	0.052	13.1	0.2	0.058	12.9	0.1	1.2	1	0	0	1	1	1	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
GntR	PF00392.16	gi|15920437|ref|NP_376106.1|	-	0.058	12.8	0.5	0.058	12.8	0.4	1.7	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
HTH_45	PF14947.1	gi|15920437|ref|NP_376106.1|	-	0.1	12.4	0.2	0.16	11.7	0.1	1.4	1	1	0	1	1	1	0	Winged	helix-turn-helix
HrcA_DNA-bdg	PF03444.10	gi|15920437|ref|NP_376106.1|	-	0.48	9.8	2.0	0.91	9.0	0.2	1.9	2	0	0	2	2	2	0	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
MRP-S26	PF14943.1	gi|15920438|ref|NP_376107.1|	-	0.045	13.3	0.7	0.055	13.0	0.5	1.3	1	0	0	1	1	1	0	Mitochondrial	ribosome	subunit	S26
Plasmid_stabil	PF05016.9	gi|15920438|ref|NP_376107.1|	-	0.066	13.6	0.5	0.083	13.2	0.3	1.2	1	0	0	1	1	1	0	Plasmid	stabilisation	system	protein
SWIM	PF04434.12	gi|15920439|ref|NP_376108.1|	-	0.095	12.1	0.1	0.15	11.5	0.0	1.4	1	0	0	1	1	1	0	SWIM	zinc	finger
DNA_primase_S	PF01896.14	gi|15920440|ref|NP_376109.1|	-	0.0077	16.0	0.1	0.0082	15.9	0.1	1.1	1	0	0	1	1	1	1	Eukaryotic	and	archaeal	DNA	primase	small	subunit
DUF1286	PF06939.6	gi|15920442|ref|NP_376111.1|	-	7.8e-46	154.9	7.1	7.8e-46	154.9	5.0	1.6	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1286)
DUF457	PF04307.9	gi|15920442|ref|NP_376111.1|	-	0.0092	15.3	15.0	0.077	12.3	10.4	2.0	1	1	0	1	1	1	1	Predicted	membrane-bound	metal-dependent	hydrolase	(DUF457)
Flp_Fap	PF04964.9	gi|15920442|ref|NP_376111.1|	-	0.39	10.3	2.1	23	4.7	0.0	2.7	2	1	0	2	2	2	0	Flp/Fap	pilin	component
Phage_integrase	PF00589.17	gi|15920443|ref|NP_376112.1|	-	3.7e-15	56.0	0.0	7.3e-15	55.0	0.0	1.4	1	1	0	1	1	1	1	Phage	integrase	family
HTH_3	PF01381.17	gi|15920444|ref|NP_376113.1|	-	8.2e-07	28.7	0.1	1.5e-06	27.8	0.1	1.6	1	0	0	1	1	1	1	Helix-turn-helix
HTH_23	PF13384.1	gi|15920444|ref|NP_376113.1|	-	0.002	17.7	0.0	0.0053	16.3	0.0	1.7	2	0	0	2	2	2	1	Homeodomain-like	domain
HTH_IclR	PF09339.5	gi|15920444|ref|NP_376113.1|	-	0.0031	17.0	0.0	0.0077	15.7	0.0	1.6	2	0	0	2	2	2	1	IclR	helix-turn-helix	domain
HTH_26	PF13443.1	gi|15920444|ref|NP_376113.1|	-	0.0031	17.6	0.0	0.0049	17.0	0.0	1.4	1	0	0	1	1	1	1	Cro/C1-type	HTH	DNA-binding	domain
HTH_31	PF13560.1	gi|15920444|ref|NP_376113.1|	-	0.0036	17.4	0.0	0.0063	16.6	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_19	PF12844.2	gi|15920444|ref|NP_376113.1|	-	0.011	15.7	0.1	0.02	14.9	0.1	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_17	PF12728.2	gi|15920444|ref|NP_376113.1|	-	0.032	14.4	0.4	0.47	10.7	0.0	2.8	3	1	0	3	3	3	0	Helix-turn-helix	domain
DUF3045	PF11243.3	gi|15920444|ref|NP_376113.1|	-	0.093	12.9	0.2	0.22	11.7	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3045)
NUMOD1	PF07453.8	gi|15920444|ref|NP_376113.1|	-	0.11	12.4	1.3	0.38	10.6	0.0	2.4	2	0	0	2	2	2	0	NUMOD1	domain
DFP	PF04127.10	gi|15920445|ref|NP_376114.1|	-	1.2e-54	184.7	0.8	8.1e-54	182.0	0.2	2.1	2	0	0	2	2	2	1	DNA	/	pantothenate	metabolism	flavoprotein
Flavoprotein	PF02441.14	gi|15920445|ref|NP_376114.1|	-	3.4e-32	110.8	0.3	7.5e-32	109.7	0.2	1.6	1	0	0	1	1	1	1	Flavoprotein
FlpD	PF02662.11	gi|15920445|ref|NP_376114.1|	-	0.13	11.9	0.0	0.57	9.8	0.0	2.1	2	0	0	2	2	2	0	Methyl-viologen-reducing	hydrogenase,	delta	subunit
Acetyltransf_1	PF00583.19	gi|15920446|ref|NP_376115.1|	-	1.4e-20	73.0	0.0	2e-20	72.5	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.1	gi|15920446|ref|NP_376115.1|	-	3.1e-12	46.6	0.0	4.4e-12	46.1	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.1	gi|15920446|ref|NP_376115.1|	-	1.9e-11	43.9	0.0	3.6e-11	43.0	0.0	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|15920446|ref|NP_376115.1|	-	4.7e-10	39.6	0.2	9.7e-10	38.6	0.2	1.5	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.1	gi|15920446|ref|NP_376115.1|	-	2.9e-09	36.9	0.0	6.1e-09	35.9	0.0	1.4	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|15920446|ref|NP_376115.1|	-	3.3e-09	36.3	0.1	5e-09	35.7	0.1	1.2	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_3	PF13302.1	gi|15920446|ref|NP_376115.1|	-	3.5e-08	33.7	0.0	5.7e-08	33.0	0.0	1.4	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|15920446|ref|NP_376115.1|	-	1.4e-07	31.3	0.1	4.3e-07	29.8	0.0	1.8	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
GNAT_acetyltr_2	PF13718.1	gi|15920446|ref|NP_376115.1|	-	0.096	11.9	0.0	0.13	11.5	0.0	1.3	1	0	0	1	1	1	0	GNAT	acetyltransferase	2
Metallophos_3	PF14582.1	gi|15920447|ref|NP_376116.1|	-	3.4e-06	26.3	0.1	6.4e-06	25.5	0.0	1.5	2	0	0	2	2	2	1	Metallophosphoesterase,	calcineurin	superfamily
Metallophos_2	PF12850.2	gi|15920447|ref|NP_376116.1|	-	0.00024	20.9	0.0	0.00052	19.8	0.0	1.5	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
CitG	PF01874.11	gi|15920448|ref|NP_376117.1|	-	6.5e-38	130.5	0.0	7.5e-38	130.3	0.0	1.0	1	0	0	1	1	1	1	ATP:dephospho-CoA	triphosphoribosyl	transferase
NTP_transf_2	PF01909.18	gi|15920449|ref|NP_376118.1|	-	0.00043	20.5	1.0	0.001	19.3	0.5	1.9	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
DUF1464	PF07318.7	gi|15920450|ref|NP_376119.1|	-	2.4e-97	325.8	0.3	4.4e-97	324.9	0.2	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1464)
Pox_A22	PF04848.8	gi|15920451|ref|NP_376120.1|	-	0.054	13.3	0.7	0.13	12.1	0.2	1.8	1	1	0	2	2	2	0	Poxvirus	A22	protein
ABC_tran	PF00005.22	gi|15920454|ref|NP_376123.1|	-	2.1e-32	112.3	0.0	2.8e-32	111.8	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|15920454|ref|NP_376123.1|	-	9.3e-16	58.6	3.0	4.6e-07	30.0	0.7	2.1	1	1	1	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|15920454|ref|NP_376123.1|	-	2.2e-05	23.6	5.4	0.031	13.3	0.9	2.2	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA_29	PF13555.1	gi|15920454|ref|NP_376123.1|	-	0.00014	21.3	0.0	0.00027	20.4	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
SMC_N	PF02463.14	gi|15920454|ref|NP_376123.1|	-	0.0015	17.8	1.2	0.87	8.7	0.1	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_5	PF07728.9	gi|15920454|ref|NP_376123.1|	-	0.0022	17.6	0.0	0.013	15.2	0.0	2.0	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_10	PF12846.2	gi|15920454|ref|NP_376123.1|	-	0.004	16.6	0.0	0.0053	16.2	0.0	1.6	1	1	0	1	1	1	1	AAA-like	domain
AAA_23	PF13476.1	gi|15920454|ref|NP_376123.1|	-	0.013	15.8	0.5	0.02	15.2	0.3	1.6	1	1	0	1	1	1	0	AAA	domain
DUF258	PF03193.11	gi|15920454|ref|NP_376123.1|	-	0.016	14.3	0.0	0.031	13.4	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
SbcCD_C	PF13558.1	gi|15920454|ref|NP_376123.1|	-	0.023	14.6	0.0	0.32	10.9	0.0	2.3	1	1	1	2	2	2	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_18	PF13238.1	gi|15920454|ref|NP_376123.1|	-	0.054	13.7	0.4	0.14	12.4	0.1	1.8	1	1	1	2	2	2	0	AAA	domain
AAA	PF00004.24	gi|15920454|ref|NP_376123.1|	-	0.069	13.3	0.3	0.29	11.3	0.2	2.1	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ArgK	PF03308.11	gi|15920454|ref|NP_376123.1|	-	0.078	11.7	0.0	0.12	11.1	0.0	1.2	1	0	0	1	1	1	0	ArgK	protein
AAA_17	PF13207.1	gi|15920454|ref|NP_376123.1|	-	0.099	13.4	0.2	0.18	12.6	0.2	1.8	1	1	0	1	1	1	0	AAA	domain
AAA_25	PF13481.1	gi|15920454|ref|NP_376123.1|	-	0.1	11.9	0.6	2.9	7.2	0.1	2.3	1	1	1	2	2	2	0	AAA	domain
AAA_24	PF13479.1	gi|15920454|ref|NP_376123.1|	-	0.13	11.7	0.0	0.18	11.3	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_30	PF13604.1	gi|15920454|ref|NP_376123.1|	-	0.14	11.7	0.0	0.25	10.9	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Acetyltransf_1	PF00583.19	gi|15920455|ref|NP_376124.1|	-	2e-15	56.5	0.0	2.7e-15	56.1	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|15920455|ref|NP_376124.1|	-	3.8e-12	46.1	0.1	6.4e-12	45.4	0.1	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|15920455|ref|NP_376124.1|	-	7.5e-08	32.0	0.0	1.3e-07	31.3	0.0	1.4	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_3	PF13302.1	gi|15920455|ref|NP_376124.1|	-	1.3e-07	31.9	0.0	1.7e-07	31.5	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|15920455|ref|NP_376124.1|	-	2.6e-07	30.6	1.0	3.1e-07	30.4	0.7	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.1	gi|15920455|ref|NP_376124.1|	-	1.1e-06	28.6	0.0	2.6e-06	27.3	0.0	1.5	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|15920455|ref|NP_376124.1|	-	2.5e-06	27.6	0.0	3.4e-06	27.1	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.1	gi|15920455|ref|NP_376124.1|	-	8.4e-05	22.3	0.0	0.00014	21.6	0.0	1.3	1	0	0	1	1	1	1	GCN5-related	N-acetyl-transferase
XendoU	PF09412.5	gi|15920455|ref|NP_376124.1|	-	0.00027	20.0	0.6	0.0069	15.4	0.1	2.0	2	0	0	2	2	2	1	Endoribonuclease	XendoU
Acetyltransf_9	PF13527.1	gi|15920455|ref|NP_376124.1|	-	0.0028	17.4	0.0	0.0045	16.8	0.0	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
MOZ_SAS	PF01853.13	gi|15920455|ref|NP_376124.1|	-	0.045	12.9	0.7	0.11	11.7	0.5	1.7	1	1	0	1	1	1	0	MOZ/SAS	family
Spc7	PF08317.6	gi|15920455|ref|NP_376124.1|	-	0.052	12.2	1.1	0.07	11.7	0.8	1.2	1	0	0	1	1	1	0	Spc7	kinetochore	protein
Gly_acyl_tr_C	PF08444.5	gi|15920455|ref|NP_376124.1|	-	0.067	13.2	0.0	0.12	12.4	0.0	1.5	1	1	0	1	1	1	0	Aralkyl	acyl-CoA:amino	acid	N-acyltransferase,	C-terminal	region
CbiZ	PF01955.13	gi|15920456|ref|NP_376125.1|	-	1.9e-36	125.6	0.0	2.1e-36	125.4	0.0	1.0	1	0	0	1	1	1	1	Adenosylcobinamide	amidohydrolase
DUF2150	PF09920.4	gi|15920456|ref|NP_376125.1|	-	0.13	11.8	0.0	0.17	11.4	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2150)
Ribosomal_S10	PF00338.17	gi|15920457|ref|NP_376126.1|	-	3.7e-32	110.0	0.1	4.1e-32	109.8	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S10p/S20e
GTP_EFTU	PF00009.22	gi|15920458|ref|NP_376127.1|	-	3.7e-55	186.2	0.0	5.1e-55	185.8	0.0	1.2	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D3	PF03143.12	gi|15920458|ref|NP_376127.1|	-	3e-31	107.4	0.8	7.5e-31	106.2	0.1	2.0	2	0	0	2	2	2	1	Elongation	factor	Tu	C-terminal	domain
GTP_EFTU_D2	PF03144.20	gi|15920458|ref|NP_376127.1|	-	1.1e-18	67.0	7.3	1.5e-17	63.5	3.3	2.8	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
GTP_EFTU_D4	PF14578.1	gi|15920458|ref|NP_376127.1|	-	6.6e-08	32.0	4.9	6.6e-08	32.0	3.4	1.9	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	4
MMR_HSR1	PF01926.18	gi|15920458|ref|NP_376127.1|	-	1.4e-06	28.2	0.1	3.7e-06	26.8	0.1	1.8	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
Miro	PF08477.8	gi|15920458|ref|NP_376127.1|	-	0.00019	21.9	0.1	0.0016	18.8	0.1	2.3	1	1	0	1	1	1	1	Miro-like	protein
SRPRB	PF09439.5	gi|15920458|ref|NP_376127.1|	-	0.00033	19.9	0.1	0.11	11.6	0.0	2.2	1	1	1	2	2	2	2	Signal	recognition	particle	receptor	beta	subunit
Septin	PF00735.13	gi|15920458|ref|NP_376127.1|	-	0.0015	17.6	0.1	0.0064	15.5	0.1	1.9	1	1	0	1	1	1	1	Septin
Gtr1_RagA	PF04670.7	gi|15920458|ref|NP_376127.1|	-	0.017	14.3	0.0	0.029	13.4	0.0	1.3	1	0	0	1	1	1	0	Gtr1/RagA	G	protein	conserved	region
Dynamin_N	PF00350.18	gi|15920458|ref|NP_376127.1|	-	0.022	14.5	0.1	2.2	8.0	0.0	2.5	1	1	1	2	2	2	0	Dynamin	family
Arf	PF00025.16	gi|15920458|ref|NP_376127.1|	-	0.056	12.6	0.4	0.99	8.6	0.0	2.5	3	0	0	3	3	3	0	ADP-ribosylation	factor	family
Ribosomal_S7	PF00177.16	gi|15920459|ref|NP_376128.1|	-	1.1e-47	161.3	0.4	1.3e-47	161.1	0.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S7p/S5e
DUF1223	PF06764.6	gi|15920459|ref|NP_376128.1|	-	0.13	12.0	0.0	0.28	10.9	0.0	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1223)
DNase-RNase	PF02577.9	gi|15920460|ref|NP_376129.1|	-	7.2e-07	28.5	0.2	1.1e-06	27.9	0.1	1.2	1	0	0	1	1	1	1	Bifunctional	nuclease
Ribosom_S12_S23	PF00164.20	gi|15920461|ref|NP_376130.1|	-	4.5e-41	139.0	0.3	5.1e-41	138.9	0.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S12/S23
KH_2	PF07650.12	gi|161751102|ref|NP_376131.2|	-	2.9e-19	68.3	2.0	3.8e-14	52.0	0.1	2.1	1	1	1	2	2	2	2	KH	domain
KH_5	PF13184.1	gi|161751102|ref|NP_376131.2|	-	2.6e-14	52.7	2.3	4.4e-14	52.0	0.3	2.1	2	1	0	2	2	2	1	NusA-like	KH	domain
KH_4	PF13083.1	gi|161751102|ref|NP_376131.2|	-	9.5e-14	50.7	0.3	2.9e-07	30.0	0.0	2.2	2	0	0	2	2	2	2	KH	domain
KH_1	PF00013.24	gi|161751102|ref|NP_376131.2|	-	1.4e-09	37.4	1.0	1.4e-05	24.6	0.1	2.3	2	0	0	2	2	2	2	KH	domain
eIF3_subunit	PF08597.5	gi|161751102|ref|NP_376131.2|	-	0.1	12.1	0.1	0.57	9.7	0.0	1.8	2	0	0	2	2	2	0	Translation	initiation	factor	eIF3	subunit
KH_3	PF13014.1	gi|161751102|ref|NP_376131.2|	-	1.1	9.0	8.4	0.49	10.1	0.3	3.2	3	1	1	4	4	4	0	KH	domain
Ribosomal_L7Ae	PF01248.21	gi|15920463|ref|NP_376132.1|	-	9.3e-20	69.9	0.0	1e-19	69.8	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
eRF1_3	PF03465.10	gi|15920463|ref|NP_376132.1|	-	0.017	15.4	0.0	0.018	15.3	0.0	1.2	1	0	0	1	1	1	0	eRF1	domain	3
RNA_pol_Rpb1_5	PF04998.12	gi|15920464|ref|NP_376133.1|	-	1.3e-54	185.3	2.6	1.7e-54	184.9	1.8	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	5
SRP54_N	PF02881.14	gi|15920464|ref|NP_376133.1|	-	0.23	11.5	8.9	0.53	10.4	0.2	4.0	3	1	1	4	4	4	0	SRP54-type	protein,	helical	bundle	domain
RNA_pol_Rpb1_1	PF04997.7	gi|15920465|ref|NP_376134.1|	-	6.4e-93	311.6	0.1	1.6e-91	307.1	0.1	2.1	1	1	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	1
RNA_pol_Rpb1_2	PF00623.15	gi|15920465|ref|NP_376134.1|	-	3.4e-71	238.5	0.0	1.2e-70	236.7	0.0	1.9	2	0	0	2	2	2	1	RNA	polymerase	Rpb1,	domain	2
RNA_pol_Rpb1_3	PF04983.13	gi|15920465|ref|NP_376134.1|	-	1.6e-37	128.6	0.0	3e-37	127.7	0.0	1.5	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	3
RNA_pol_Rpb1_4	PF05000.12	gi|15920465|ref|NP_376134.1|	-	5e-32	109.8	0.0	1e-31	108.8	0.0	1.5	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	4
RNA_pol_Rpb1_5	PF04998.12	gi|15920465|ref|NP_376134.1|	-	3e-27	95.5	0.1	5.8e-27	94.6	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	5
CpXC	PF14353.1	gi|15920465|ref|NP_376134.1|	-	0.021	14.7	5.2	0.037	13.9	1.3	2.6	1	1	1	2	2	2	0	CpXC	protein
zf-ribbon_3	PF13248.1	gi|15920465|ref|NP_376134.1|	-	0.076	12.2	7.4	3.6	6.9	0.3	3.5	3	0	0	3	3	3	0	zinc-ribbon	domain
zf-ISL3	PF14690.1	gi|15920465|ref|NP_376134.1|	-	0.84	9.7	9.3	1.9	8.5	0.2	3.5	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
DZR	PF12773.2	gi|15920465|ref|NP_376134.1|	-	1	9.2	5.4	54	3.7	3.8	2.5	1	1	0	1	1	1	0	Double	zinc	ribbon
Zn_Tnp_IS1595	PF12760.2	gi|15920465|ref|NP_376134.1|	-	1.2	8.9	6.4	8.1	6.3	0.0	3.4	3	0	0	3	3	3	0	Transposase	zinc-ribbon	domain
zf-FPG_IleRS	PF06827.9	gi|15920465|ref|NP_376134.1|	-	1.9	8.2	8.9	0.42	10.2	0.2	3.3	3	0	0	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
zinc_ribbon_2	PF13240.1	gi|15920465|ref|NP_376134.1|	-	6.5	6.3	13.9	17	5.0	1.7	3.5	3	0	0	3	3	3	0	zinc-ribbon	domain
RNA_pol_Rpb2_6	PF00562.23	gi|15920466|ref|NP_376135.1|	-	2.1e-126	421.7	0.0	3e-126	421.2	0.0	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	6
RNA_pol_Rpb2_1	PF04563.10	gi|15920466|ref|NP_376135.1|	-	3.5e-61	205.6	0.0	5.9e-61	204.9	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	beta	subunit
RNA_pol_Rpb2_2	PF04561.9	gi|15920466|ref|NP_376135.1|	-	2e-42	144.7	0.3	4.2e-42	143.7	0.0	1.7	2	0	0	2	2	2	1	RNA	polymerase	Rpb2,	domain	2
RNA_pol_Rpb2_7	PF04560.15	gi|15920466|ref|NP_376135.1|	-	1.9e-27	95.3	0.0	4.2e-27	94.2	0.0	1.6	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	7
RNA_pol_Rpb2_3	PF04565.11	gi|15920466|ref|NP_376135.1|	-	5.8e-26	90.0	0.0	1.2e-25	89.0	0.0	1.6	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	3
RNA_pol_Rpb2_4	PF04566.8	gi|15920466|ref|NP_376135.1|	-	2.6e-20	71.9	0.4	6.3e-20	70.7	0.3	1.7	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	4
RNA_pol_Rpb2_5	PF04567.12	gi|15920466|ref|NP_376135.1|	-	1.5e-15	56.8	0.1	3.1e-15	55.8	0.1	1.6	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	5
DUF1610	PF07754.6	gi|15920466|ref|NP_376135.1|	-	0.25	11.5	1.5	0.89	9.7	0.0	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
RNA_pol_Rpb5_C	PF01191.14	gi|15920467|ref|NP_376136.1|	-	2.1e-31	107.3	0.6	3.5e-31	106.5	0.1	1.5	2	0	0	2	2	2	1	RNA	polymerase	Rpb5,	C-terminal	domain
Malic_M	PF03949.10	gi|15920468|ref|NP_376137.1|	-	4.6e-69	232.8	0.1	5.8e-69	232.4	0.0	1.1	1	0	0	1	1	1	1	Malic	enzyme,	NAD	binding	domain
malic	PF00390.14	gi|15920468|ref|NP_376137.1|	-	2.1e-26	92.5	0.3	1.4e-17	63.8	0.2	2.5	1	1	1	2	2	2	2	Malic	enzyme,	N-terminal	domain
GTP_EFTU	PF00009.22	gi|15920469|ref|NP_376138.1|	-	7e-33	113.6	0.0	2.4e-32	111.8	0.0	1.8	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D4	PF14578.1	gi|15920469|ref|NP_376138.1|	-	2e-24	85.0	2.2	6.2e-24	83.4	1.5	1.9	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	4
IF-2	PF11987.3	gi|15920469|ref|NP_376138.1|	-	1.6e-18	66.5	3.0	1.6e-18	66.5	2.1	1.8	2	0	0	2	2	2	1	Translation-initiation	factor	2
GTP_EFTU_D2	PF03144.20	gi|15920469|ref|NP_376138.1|	-	5.9e-13	48.7	3.0	1.1e-11	44.6	0.1	2.9	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.18	gi|15920469|ref|NP_376138.1|	-	9.8e-07	28.7	1.2	3.8e-06	26.8	0.0	2.5	3	0	0	3	3	3	1	50S	ribosome-binding	GTPase
Miro	PF08477.8	gi|15920469|ref|NP_376138.1|	-	2.8e-05	24.5	0.0	0.00011	22.6	0.0	2.1	1	0	0	1	1	1	1	Miro-like	protein
Dynamin_N	PF00350.18	gi|15920469|ref|NP_376138.1|	-	0.0019	18.0	0.2	0.056	13.2	0.0	2.9	3	0	0	3	3	3	1	Dynamin	family
Arf	PF00025.16	gi|15920469|ref|NP_376138.1|	-	0.0028	16.9	0.1	3.8	6.7	0.0	3.3	2	1	0	2	2	2	2	ADP-ribosylation	factor	family
Ras	PF00071.17	gi|15920469|ref|NP_376138.1|	-	0.006	15.9	0.0	0.089	12.1	0.0	3.0	1	1	0	1	1	1	1	Ras	family
PduV-EutP	PF10662.4	gi|15920469|ref|NP_376138.1|	-	0.0067	15.9	0.7	1	8.8	0.0	4.0	4	1	0	4	4	4	1	Ethanolamine	utilisation	-	propanediol	utilisation
DUF367	PF04034.8	gi|15920469|ref|NP_376138.1|	-	0.028	14.0	0.1	0.4	10.2	0.0	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF367)
MobB	PF03205.9	gi|15920469|ref|NP_376138.1|	-	0.034	13.8	0.1	0.52	10.0	0.1	2.7	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NDK	PF00334.14	gi|15920470|ref|NP_376139.1|	-	7.9e-59	197.2	0.1	8.9e-59	197.1	0.0	1.0	1	0	0	1	1	1	1	Nucleoside	diphosphate	kinase
Ribosomal_L24e	PF01246.15	gi|15920471|ref|NP_376140.1|	-	7.2e-20	70.6	0.4	8.2e-20	70.4	0.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L24e
zf-FCS	PF06467.9	gi|15920471|ref|NP_376140.1|	-	1e-05	25.0	1.1	1.5e-05	24.5	0.8	1.3	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
zf-MYND	PF01753.13	gi|15920471|ref|NP_376140.1|	-	0.0037	17.1	0.0	0.0062	16.3	0.0	1.4	1	1	0	1	1	1	1	MYND	finger
Arc_trans_TRASH	PF08394.5	gi|15920471|ref|NP_376140.1|	-	0.0082	16.2	0.8	0.022	14.8	0.5	1.8	1	1	0	1	1	1	1	Archaeal	TRASH	domain
DUF2116	PF09889.4	gi|15920471|ref|NP_376140.1|	-	0.009	15.7	1.5	1.4	8.7	0.1	2.1	2	0	0	2	2	2	2	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
DUF581	PF04570.9	gi|15920471|ref|NP_376140.1|	-	0.01	15.1	0.6	0.019	14.2	0.4	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF581)
YHS	PF04945.8	gi|15920471|ref|NP_376140.1|	-	0.012	15.4	0.1	0.021	14.6	0.1	1.3	1	0	0	1	1	1	0	YHS	domain
Ecl1	PF12855.2	gi|15920471|ref|NP_376140.1|	-	0.06	12.6	0.1	0.088	12.1	0.0	1.3	1	1	0	1	1	1	0	Life-span	regulatory	factor
zf-C4_ClpX	PF06689.8	gi|15920471|ref|NP_376140.1|	-	0.07	12.6	3.4	0.11	12.0	2.4	1.5	1	1	0	1	1	1	0	ClpX	C4-type	zinc	finger
DUF2175	PF09943.4	gi|15920471|ref|NP_376140.1|	-	0.077	13.0	0.2	0.087	12.8	0.1	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2175)
CpXC	PF14353.1	gi|15920471|ref|NP_376140.1|	-	0.13	12.2	0.1	0.14	12.0	0.0	1.0	1	0	0	1	1	1	0	CpXC	protein
Ta0938	PF11494.3	gi|15920471|ref|NP_376140.1|	-	0.13	12.3	0.0	0.15	12.1	0.0	1.1	1	0	0	1	1	1	0	Ta0938
A2L_zn_ribbon	PF08792.5	gi|15920471|ref|NP_376140.1|	-	0.45	10.0	2.5	11	5.5	0.1	2.3	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
DUF329	PF03884.9	gi|15920471|ref|NP_376140.1|	-	0.51	9.9	4.1	3.2	7.3	2.8	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF329)
zf-HIT	PF04438.11	gi|15920471|ref|NP_376140.1|	-	1.1	8.9	4.6	34	4.2	3.2	2.1	1	1	0	1	1	1	0	HIT	zinc	finger
DUF2256	PF10013.4	gi|15920471|ref|NP_376140.1|	-	3.7	7.3	7.7	7.2	6.4	0.1	2.7	3	0	0	3	3	3	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2256)
zinc_ribbon_2	PF13240.1	gi|15920471|ref|NP_376140.1|	-	7.4	6.2	6.8	0.7	9.4	0.4	2.3	3	0	0	3	3	3	0	zinc-ribbon	domain
Ribosomal_S28e	PF01200.13	gi|15920472|ref|NP_376141.1|	-	1.1e-31	108.3	2.8	1.2e-31	108.2	1.9	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S28e
KOW	PF00467.24	gi|15920472|ref|NP_376141.1|	-	0.015	15.0	0.7	0.59	9.9	0.1	2.7	2	1	0	2	2	2	0	KOW	motif
UPRTase	PF14681.1	gi|15920473|ref|NP_376142.1|	-	2.1e-57	193.6	0.0	2.4e-57	193.4	0.0	1.0	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
Pribosyltran	PF00156.22	gi|15920473|ref|NP_376142.1|	-	5.5e-10	39.0	0.5	9.1e-10	38.3	0.3	1.3	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
GatB_N	PF02934.10	gi|15920474|ref|NP_376143.1|	-	7.4e-107	356.5	0.0	1.1e-106	355.9	0.0	1.2	1	0	0	1	1	1	1	GatB/GatE	catalytic	domain
GatB_Yqey	PF02637.13	gi|15920474|ref|NP_376143.1|	-	3.3e-43	146.9	3.0	3.3e-43	146.9	2.1	1.7	2	0	0	2	2	2	1	GatB	domain
hEGF	PF12661.2	gi|15920474|ref|NP_376143.1|	-	9	6.6	5.8	0.5	10.5	0.3	1.8	2	0	0	2	2	2	0	Human	growth	factor-like	EGF
Pribosyltran	PF00156.22	gi|15920475|ref|NP_376144.1|	-	1e-19	70.4	0.7	1.6e-19	69.8	0.5	1.3	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.1	gi|15920475|ref|NP_376144.1|	-	0.0045	16.2	0.1	0.007	15.5	0.0	1.3	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
HTH_3	PF01381.17	gi|15920475|ref|NP_376144.1|	-	0.0077	16.0	0.0	0.022	14.6	0.0	1.7	1	0	0	1	1	1	1	Helix-turn-helix
HTH_Mga	PF08280.6	gi|15920475|ref|NP_376144.1|	-	0.041	13.6	0.1	0.12	12.1	0.1	1.8	1	0	0	1	1	1	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_Tnp_4	PF13613.1	gi|15920475|ref|NP_376144.1|	-	0.044	13.3	0.0	0.094	12.2	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	of	DDE	superfamily	endonuclease
HTH_23	PF13384.1	gi|15920475|ref|NP_376144.1|	-	0.14	11.8	0.0	0.32	10.6	0.0	1.6	1	0	0	1	1	1	0	Homeodomain-like	domain
Lactamase_B	PF00753.22	gi|15920476|ref|NP_376145.1|	-	0.0016	18.0	0.1	0.0028	17.3	0.0	1.4	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
RibD_C	PF01872.12	gi|15920477|ref|NP_376146.1|	-	4.4e-40	137.4	0.0	5e-40	137.2	0.0	1.0	1	0	0	1	1	1	1	RibD	C-terminal	domain
Radical_SAM	PF04055.16	gi|15920478|ref|NP_376147.1|	-	1.4e-18	67.5	0.1	1.4e-18	67.5	0.0	2.0	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|15920478|ref|NP_376147.1|	-	2.1e-08	34.2	1.5	3e-08	33.7	0.0	2.0	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|15920478|ref|NP_376147.1|	-	1.1e-06	28.8	1.3	3.5e-06	27.1	0.9	1.8	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Peptidase_S13	PF02113.10	gi|15920478|ref|NP_376147.1|	-	0.048	12.1	0.0	0.14	10.6	0.0	1.7	2	0	0	2	2	2	0	D-Ala-D-Ala	carboxypeptidase	3	(S13)	family
AIRS	PF00586.19	gi|15920479|ref|NP_376148.1|	-	3e-13	49.8	0.0	5e-13	49.1	0.0	1.4	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
AIRS_C	PF02769.17	gi|15920479|ref|NP_376148.1|	-	0.00012	22.1	0.0	0.00018	21.5	0.0	1.3	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
Lyase_1	PF00206.15	gi|15920480|ref|NP_376149.1|	-	3.5e-47	161.1	0.0	5.2e-47	160.5	0.0	1.2	1	0	0	1	1	1	1	Lyase
ADSL_C	PF10397.4	gi|15920480|ref|NP_376149.1|	-	3e-17	62.4	0.4	1.3e-16	60.3	0.1	2.2	2	0	0	2	2	2	1	Adenylosuccinate	lyase	C-terminus
DUF1297	PF06973.7	gi|15920481|ref|NP_376150.1|	-	9.1e-76	253.3	0.0	1.2e-75	253.0	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1297)
DUF1246	PF06849.7	gi|15920481|ref|NP_376150.1|	-	1e-42	144.7	0.1	1.7e-42	144.1	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1246)
GARS_A	PF01071.14	gi|15920481|ref|NP_376150.1|	-	0.00038	20.0	0.0	0.00093	18.8	0.0	1.6	2	0	0	2	2	2	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATP-grasp_3	PF02655.9	gi|15920481|ref|NP_376150.1|	-	0.00081	19.2	0.3	0.0023	17.7	0.2	1.9	1	1	0	1	1	1	1	ATP-grasp	domain
CPSase_L_D2	PF02786.12	gi|15920481|ref|NP_376150.1|	-	0.039	13.2	0.0	0.063	12.5	0.0	1.2	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
ATP-grasp_4	PF13535.1	gi|15920481|ref|NP_376150.1|	-	0.06	13.0	0.0	0.36	10.5	0.0	1.9	1	1	0	1	1	1	0	ATP-grasp	domain
ATP-grasp	PF02222.17	gi|15920481|ref|NP_376150.1|	-	0.069	12.5	0.5	1.1	8.5	0.0	2.2	2	0	0	2	2	2	0	ATP-grasp	domain
DUF1297	PF06973.7	gi|15920482|ref|NP_376151.1|	-	4.2e-81	270.7	0.0	5.2e-81	270.4	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1297)
DUF1246	PF06849.7	gi|15920482|ref|NP_376151.1|	-	6.1e-46	155.2	0.0	9.5e-46	154.6	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1246)
ATP-grasp_4	PF13535.1	gi|15920482|ref|NP_376151.1|	-	5.1e-07	29.5	0.0	8.1e-06	25.6	0.0	2.1	1	1	0	1	1	1	1	ATP-grasp	domain
Adenylsucc_synt	PF00709.16	gi|15920483|ref|NP_376152.1|	-	2e-76	257.3	0.1	3e-39	134.8	0.0	3.0	1	1	2	3	3	3	3	Adenylosuccinate	synthetase
DapB_C	PF05173.9	gi|15920483|ref|NP_376152.1|	-	0.035	13.8	0.0	0.061	13.0	0.0	1.4	1	0	0	1	1	1	0	Dihydrodipicolinate	reductase,	C-terminus
Pyr_redox_2	PF07992.9	gi|15920484|ref|NP_376153.1|	-	7.4e-12	45.5	0.3	2.3e-05	24.3	0.0	3.3	3	0	0	3	3	3	3	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|15920484|ref|NP_376153.1|	-	8.3e-11	40.9	0.0	1.1e-06	27.4	0.0	2.3	2	0	0	2	2	2	2	HI0933-like	protein
DAO	PF01266.19	gi|15920484|ref|NP_376153.1|	-	1.4e-09	37.3	0.1	0.0001	21.3	0.0	2.4	2	1	0	2	2	2	2	FAD	dependent	oxidoreductase
GIDA	PF01134.17	gi|15920484|ref|NP_376153.1|	-	4.1e-09	35.8	0.1	0.00014	20.8	0.0	2.4	2	0	0	2	2	2	2	Glucose	inhibited	division	protein	A
NAD_binding_8	PF13450.1	gi|15920484|ref|NP_376153.1|	-	1.4e-06	28.2	0.0	1.9e-05	24.5	0.0	2.4	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.12	gi|15920484|ref|NP_376153.1|	-	6.2e-05	22.1	0.1	0.00041	19.5	0.0	2.1	2	0	0	2	2	2	1	Thi4	family
Pyr_redox_3	PF13738.1	gi|15920484|ref|NP_376153.1|	-	0.00026	21.1	0.0	0.002	18.2	0.0	2.3	1	1	1	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.19	gi|15920484|ref|NP_376153.1|	-	0.00036	19.4	0.4	0.0012	17.7	0.0	2.0	3	0	0	3	3	3	1	FAD	binding	domain
Lycopene_cycl	PF05834.7	gi|15920484|ref|NP_376153.1|	-	0.00051	19.0	0.0	0.00089	18.2	0.0	1.3	1	0	0	1	1	1	1	Lycopene	cyclase	protein
NAD_binding_9	PF13454.1	gi|15920484|ref|NP_376153.1|	-	0.00051	19.8	0.0	0.0017	18.1	0.0	1.8	2	0	0	2	2	2	1	FAD-NAD(P)-binding
Pyr_redox	PF00070.22	gi|15920484|ref|NP_376153.1|	-	0.0041	17.4	0.1	1.8	9.0	0.0	3.5	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|15920484|ref|NP_376153.1|	-	0.014	14.4	0.0	0.026	13.5	0.0	1.4	1	0	0	1	1	1	0	FAD	binding	domain
Trp_halogenase	PF04820.9	gi|15920484|ref|NP_376153.1|	-	0.014	14.0	0.0	0.036	12.7	0.0	1.6	2	0	0	2	2	2	0	Tryptophan	halogenase
HTH_36	PF13730.1	gi|15920485|ref|NP_376154.1|	-	9.6e-05	22.4	0.1	0.69	10.0	0.0	2.9	2	0	0	2	2	2	2	Helix-turn-helix	domain
HTH_AsnC-type	PF13404.1	gi|15920485|ref|NP_376154.1|	-	0.00011	21.7	0.0	0.0014	18.1	0.0	2.3	2	0	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
HTH_24	PF13412.1	gi|15920485|ref|NP_376154.1|	-	0.00025	20.3	5.3	0.23	10.8	0.1	3.0	2	1	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
DUF2805	PF10985.3	gi|15920485|ref|NP_376154.1|	-	0.00026	20.8	1.1	0.76	9.7	0.0	2.6	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF2805)
Sigma70_r4	PF04545.11	gi|15920485|ref|NP_376154.1|	-	0.00094	18.4	0.0	0.007	15.6	0.0	2.4	3	0	0	3	3	3	1	Sigma-70,	region	4
HTH_27	PF13463.1	gi|15920485|ref|NP_376154.1|	-	0.0022	18.3	0.0	0.33	11.3	0.0	2.5	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|15920485|ref|NP_376154.1|	-	0.0046	16.6	0.4	2.1	8.1	0.0	2.9	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
Rrf2	PF02082.15	gi|15920485|ref|NP_376154.1|	-	0.0051	16.8	0.1	0.85	9.7	0.0	2.7	2	0	0	2	2	2	1	Transcriptional	regulator
MarR	PF01047.17	gi|15920485|ref|NP_376154.1|	-	0.02	14.6	0.1	9.5	6.0	0.0	2.6	2	0	0	2	2	2	0	MarR	family
DUF334	PF03904.8	gi|15920485|ref|NP_376154.1|	-	0.021	14.1	0.2	0.021	14.1	0.2	1.8	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF334)
HxlR	PF01638.12	gi|15920485|ref|NP_376154.1|	-	0.025	14.1	0.1	1.2	8.7	0.0	2.7	2	0	0	2	2	2	0	HxlR-like	helix-turn-helix
Aldo_ket_red	PF00248.16	gi|15920485|ref|NP_376154.1|	-	0.044	12.6	0.2	0.99	8.1	0.1	2.7	1	1	1	2	2	2	0	Aldo/keto	reductase	family
DUF1044	PF06296.7	gi|15920485|ref|NP_376154.1|	-	0.045	13.5	0.0	2.3	8.0	0.0	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1044)
DUF4342	PF14242.1	gi|15920485|ref|NP_376154.1|	-	0.11	12.2	8.6	6.1	6.6	0.1	3.5	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4342)
Mga	PF05043.8	gi|15920485|ref|NP_376154.1|	-	0.28	11.4	2.3	10	6.4	0.1	3.1	3	0	0	3	3	3	0	Mga	helix-turn-helix	domain
PDT	PF00800.13	gi|15920486|ref|NP_376155.1|	-	9.2e-22	77.4	1.1	9.2e-22	77.4	0.8	1.5	2	0	0	2	2	2	1	Prephenate	dehydratase
ACT	PF01842.20	gi|15920486|ref|NP_376155.1|	-	3.9e-06	26.2	0.0	9.1e-06	25.0	0.0	1.7	1	0	0	1	1	1	1	ACT	domain
Thr_dehydrat_C	PF00585.13	gi|15920486|ref|NP_376155.1|	-	0.022	14.3	0.1	0.12	12.0	0.0	2.2	3	0	0	3	3	3	0	C-terminal	regulatory	domain	of	Threonine	dehydratase
PALP	PF00291.20	gi|15920487|ref|NP_376156.1|	-	1.9e-74	250.6	0.2	2.3e-74	250.4	0.1	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
ACT_4	PF13291.1	gi|15920487|ref|NP_376156.1|	-	0.011	16.0	0.1	0.043	14.1	0.0	2.1	2	0	0	2	2	2	0	ACT	domain
ACT	PF01842.20	gi|15920487|ref|NP_376156.1|	-	0.017	14.5	0.3	0.06	12.8	0.0	2.0	2	0	0	2	2	2	0	ACT	domain
ACT_6	PF13740.1	gi|15920487|ref|NP_376156.1|	-	0.023	14.3	0.0	0.058	13.1	0.0	1.7	1	0	0	1	1	1	0	ACT	domain
EFG_C	PF00679.19	gi|15920487|ref|NP_376156.1|	-	0.12	12.2	0.0	0.25	11.2	0.0	1.5	1	0	0	1	1	1	0	Elongation	factor	G	C-terminus
HIT	PF01230.18	gi|15920488|ref|NP_376157.1|	-	9.6e-14	51.7	0.0	1.4e-13	51.2	0.0	1.2	1	0	0	1	1	1	1	HIT	domain
CwfJ_C_1	PF04677.10	gi|15920488|ref|NP_376157.1|	-	7.8e-08	32.0	0.2	1.3e-07	31.3	0.2	1.3	1	1	0	1	1	1	1	Protein	similar	to	CwfJ	C-terminus	1
DcpS_C	PF11969.3	gi|15920488|ref|NP_376157.1|	-	4.3e-07	30.1	0.0	7e-07	29.4	0.0	1.3	1	0	0	1	1	1	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
Rad51	PF08423.6	gi|15920489|ref|NP_376158.1|	-	4.3e-92	307.6	0.0	5.1e-92	307.3	0.0	1.0	1	0	0	1	1	1	1	Rad51
AAA_25	PF13481.1	gi|15920489|ref|NP_376158.1|	-	9.5e-14	51.2	0.0	1.5e-13	50.5	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
RecA	PF00154.16	gi|15920489|ref|NP_376158.1|	-	1.3e-13	50.7	0.1	1.9e-13	50.2	0.1	1.1	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
KaiC	PF06745.8	gi|15920489|ref|NP_376158.1|	-	2.2e-10	40.0	0.0	3.8e-10	39.2	0.0	1.4	1	0	0	1	1	1	1	KaiC
HHH_5	PF14520.1	gi|15920489|ref|NP_376158.1|	-	4.8e-10	39.4	0.1	1.2e-09	38.1	0.1	1.7	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
Cdd1	PF11731.3	gi|15920489|ref|NP_376158.1|	-	0.0004	20.2	0.0	0.0009	19.1	0.0	1.6	1	0	0	1	1	1	1	Pathogenicity	locus
AAA_24	PF13479.1	gi|15920489|ref|NP_376158.1|	-	0.0076	15.8	0.0	0.017	14.7	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|15920489|ref|NP_376158.1|	-	0.01	15.9	0.1	0.034	14.2	0.1	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_18	PF13238.1	gi|15920489|ref|NP_376158.1|	-	0.036	14.3	0.0	0.084	13.1	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
HHH_2	PF12826.2	gi|15920489|ref|NP_376158.1|	-	0.11	12.3	0.0	0.29	11.0	0.0	1.7	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
Toxin_10	PF05431.6	gi|15920489|ref|NP_376158.1|	-	0.11	12.0	0.1	0.27	10.8	0.0	1.6	2	0	0	2	2	2	0	Insecticidal	Crystal	Toxin,	P42
UPF0113	PF03657.8	gi|15920490|ref|NP_376159.1|	-	0.00013	21.6	0.6	0.00016	21.3	0.4	1.2	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0113)
Nol1_Nop2_Fmu	PF01189.12	gi|15920491|ref|NP_376160.1|	-	5.7e-53	180.1	0.0	7.1e-53	179.8	0.0	1.1	1	0	0	1	1	1	1	NOL1/NOP2/sun	family
Methyltransf_31	PF13847.1	gi|15920491|ref|NP_376160.1|	-	6.1e-09	35.6	0.4	1.2e-08	34.6	0.0	1.7	2	1	0	2	2	2	1	Methyltransferase	domain
PCMT	PF01135.14	gi|15920491|ref|NP_376160.1|	-	1.1e-06	28.3	0.0	1.9e-06	27.5	0.0	1.3	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_18	PF12847.2	gi|15920491|ref|NP_376160.1|	-	3e-05	24.5	0.0	5e-05	23.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_4	PF02390.12	gi|15920491|ref|NP_376160.1|	-	0.00018	20.6	0.0	0.00036	19.6	0.0	1.4	1	0	0	1	1	1	1	Putative	methyltransferase
FtsJ	PF01728.14	gi|15920491|ref|NP_376160.1|	-	0.00081	19.4	0.0	0.0014	18.6	0.0	1.6	1	1	0	1	1	1	1	FtsJ-like	methyltransferase
Met_10	PF02475.11	gi|15920491|ref|NP_376160.1|	-	0.0015	18.1	0.0	0.0029	17.2	0.0	1.4	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_26	PF13659.1	gi|15920491|ref|NP_376160.1|	-	0.0028	17.6	0.0	0.004	17.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|15920491|ref|NP_376160.1|	-	0.012	14.6	0.0	0.02	13.9	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	RNA	adenine	dimethylase
MTS	PF05175.9	gi|15920491|ref|NP_376160.1|	-	0.015	14.6	0.0	0.024	14.0	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	small	domain
Fibrillarin	PF01269.12	gi|15920491|ref|NP_376160.1|	-	0.021	13.7	0.0	0.035	13.0	0.0	1.3	1	0	0	1	1	1	0	Fibrillarin
Cons_hypoth95	PF03602.10	gi|15920491|ref|NP_376160.1|	-	0.11	11.9	0.0	0.17	11.2	0.0	1.3	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
Methyltransf_25	PF13649.1	gi|15920491|ref|NP_376160.1|	-	0.11	12.8	0.0	0.18	12.1	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
CYTH	PF01928.16	gi|15920492|ref|NP_376161.1|	-	1.3e-32	112.9	2.3	1.5e-32	112.7	1.6	1.0	1	0	0	1	1	1	1	CYTH	domain
SAM_adeno_trans	PF01887.11	gi|15920493|ref|NP_376162.1|	-	1.5e-71	240.4	0.0	1.7e-71	240.2	0.0	1.0	1	0	0	1	1	1	1	S-adenosyl-l-methionine	hydroxide	adenosyltransferase
CTP_transf_2	PF01467.21	gi|15920494|ref|NP_376163.1|	-	0.0013	18.8	0.0	0.0018	18.3	0.0	1.2	1	0	0	1	1	1	1	Cytidylyltransferase
4HBT	PF03061.17	gi|15920495|ref|NP_376164.1|	-	2.3e-22	78.8	0.0	1.7e-12	47.3	0.0	2.2	2	0	0	2	2	2	2	Thioesterase	superfamily
4HBT_2	PF13279.1	gi|15920495|ref|NP_376164.1|	-	0.011	16.1	0.0	2.9	8.3	0.0	2.1	2	0	0	2	2	2	0	Thioesterase-like	superfamily
DUF99	PF01949.11	gi|15920496|ref|NP_376165.1|	-	1.2e-29	102.7	0.0	1.6e-29	102.3	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF99
End_beta_propel	PF12217.3	gi|15920496|ref|NP_376165.1|	-	0.015	14.0	0.2	0.019	13.6	0.1	1.1	1	0	0	1	1	1	0	Catalytic	beta	propeller	domain	of	bacteriophage	endosialidase
Cdc6_C	PF09079.6	gi|15920497|ref|NP_376166.1|	-	1.5e-26	91.8	1.6	2.8e-26	91.0	0.5	2.0	2	0	0	2	2	1	1	CDC6,	C	terminal
AAA_16	PF13191.1	gi|15920497|ref|NP_376166.1|	-	1.1e-12	48.3	0.1	3.6e-11	43.4	0.0	2.6	2	1	0	2	2	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|15920497|ref|NP_376166.1|	-	1.2e-12	48.0	0.0	3.7e-12	46.5	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
NB-ARC	PF00931.17	gi|15920497|ref|NP_376166.1|	-	3.9e-09	35.7	0.0	7.5e-09	34.8	0.0	1.5	1	0	0	1	1	1	1	NB-ARC	domain
AAA	PF00004.24	gi|15920497|ref|NP_376166.1|	-	5.4e-09	36.3	0.1	1.5e-08	34.9	0.0	1.8	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Arch_ATPase	PF01637.13	gi|15920497|ref|NP_376166.1|	-	5.6e-06	26.2	1.1	1.8e-05	24.5	0.7	1.8	1	1	0	1	1	1	1	Archaeal	ATPase
KAP_NTPase	PF07693.9	gi|15920497|ref|NP_376166.1|	-	2.3e-05	23.5	0.4	0.00044	19.3	0.0	2.5	1	1	1	2	2	2	1	KAP	family	P-loop	domain
DUF815	PF05673.8	gi|15920497|ref|NP_376166.1|	-	3.3e-05	22.9	0.0	5.5e-05	22.2	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
AAA_17	PF13207.1	gi|15920497|ref|NP_376166.1|	-	8.6e-05	23.3	1.3	0.00046	21.0	1.0	2.3	1	1	0	1	1	1	1	AAA	domain
NACHT	PF05729.7	gi|15920497|ref|NP_376166.1|	-	0.00063	19.4	0.0	0.0011	18.5	0.0	1.4	1	0	0	1	1	1	1	NACHT	domain
RuvB_N	PF05496.7	gi|15920497|ref|NP_376166.1|	-	0.0019	17.2	0.1	0.32	10.0	0.0	2.8	3	0	0	3	3	3	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_18	PF13238.1	gi|15920497|ref|NP_376166.1|	-	0.0021	18.3	0.2	0.007	16.6	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
DUF2075	PF09848.4	gi|15920497|ref|NP_376166.1|	-	0.0029	16.6	0.0	0.0043	16.0	0.0	1.3	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
PIF1	PF05970.9	gi|15920497|ref|NP_376166.1|	-	0.0033	16.4	0.0	0.0066	15.4	0.0	1.5	1	0	0	1	1	1	1	PIF1-like	helicase
Sigma54_activat	PF00158.21	gi|15920497|ref|NP_376166.1|	-	0.0051	16.3	0.0	0.018	14.5	0.0	1.9	1	1	0	1	1	1	1	Sigma-54	interaction	domain
DEAD	PF00270.24	gi|15920497|ref|NP_376166.1|	-	0.0068	15.9	0.5	3.7	7.0	0.0	2.5	1	1	0	2	2	2	1	DEAD/DEAH	box	helicase
AAA_32	PF13654.1	gi|15920497|ref|NP_376166.1|	-	0.0072	15.0	1.1	0.025	13.2	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
ATP-synt_ab	PF00006.20	gi|15920497|ref|NP_376166.1|	-	0.011	15.2	0.0	0.035	13.6	0.0	1.8	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ResIII	PF04851.10	gi|15920497|ref|NP_376166.1|	-	0.015	15.1	0.0	0.031	14.1	0.0	1.4	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
Torsin	PF06309.6	gi|15920497|ref|NP_376166.1|	-	0.015	15.1	0.0	0.029	14.2	0.0	1.4	1	0	0	1	1	1	0	Torsin
Bac_DnaA	PF00308.13	gi|15920497|ref|NP_376166.1|	-	0.016	14.8	0.3	0.61	9.6	0.0	2.2	2	0	0	2	2	2	0	Bacterial	dnaA	protein
Membrane_bind	PF14564.1	gi|15920497|ref|NP_376166.1|	-	0.017	15.2	0.8	0.04	14.1	0.0	1.9	3	0	0	3	3	1	0	Membrane	binding
AAA_10	PF12846.2	gi|15920497|ref|NP_376166.1|	-	0.02	14.3	0.0	2.2	7.6	0.0	2.4	2	0	0	2	2	2	0	AAA-like	domain
T2SE	PF00437.15	gi|15920497|ref|NP_376166.1|	-	0.021	13.7	0.0	0.037	12.9	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
E2F_TDP	PF02319.15	gi|15920497|ref|NP_376166.1|	-	0.029	13.9	2.5	0.25	10.9	0.3	3.0	3	0	0	3	3	3	0	E2F/DP	family	winged-helix	DNA-binding	domain
AAA_14	PF13173.1	gi|15920497|ref|NP_376166.1|	-	0.043	13.7	0.5	0.099	12.5	0.3	1.7	1	1	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.17	gi|15920497|ref|NP_376166.1|	-	0.057	13.6	0.0	0.15	12.2	0.0	1.7	1	0	0	1	1	1	0	RNA	helicase
IstB_IS21	PF01695.12	gi|15920497|ref|NP_376166.1|	-	0.068	12.5	0.0	2.1	7.7	0.0	2.3	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
YfkD	PF14167.1	gi|15920497|ref|NP_376166.1|	-	0.081	11.9	0.1	0.14	11.1	0.1	1.3	1	0	0	1	1	1	0	YfkD-like	protein
Cytidylate_kin	PF02224.13	gi|15920497|ref|NP_376166.1|	-	0.096	12.1	2.7	0.091	12.1	0.3	2.1	2	1	0	2	2	2	0	Cytidylate	kinase
APG12	PF04110.8	gi|15920497|ref|NP_376166.1|	-	0.1	12.8	0.2	0.5	10.5	0.0	2.2	1	1	1	2	2	2	0	Ubiquitin-like	autophagy	protein	Apg12
Colicin_D	PF11429.3	gi|15920497|ref|NP_376166.1|	-	0.13	12.3	1.0	0.2	11.8	0.1	1.9	2	0	0	2	2	1	0	Colicin	D
SSV1_ORF_D-335	PF07935.6	gi|15920498|ref|NP_376167.1|	-	2.1e-30	104.2	1.6	2.7e-30	103.9	1.1	1.1	1	0	0	1	1	1	1	ORF	D-335-like	protein
SWIM	PF04434.12	gi|15920499|ref|NP_376168.1|	-	4.7e-05	22.7	0.2	7.3e-05	22.1	0.1	1.3	1	0	0	1	1	1	1	SWIM	zinc	finger
Elf1	PF05129.8	gi|15920500|ref|NP_376169.1|	-	9.6e-21	73.2	0.0	1.3e-20	72.8	0.0	1.2	1	0	0	1	1	1	1	Transcription	elongation	factor	Elf1	like
Lar_restr_allev	PF14354.1	gi|15920500|ref|NP_376169.1|	-	8.1e-05	22.8	0.2	8.1e-05	22.8	0.1	1.5	2	0	0	2	2	1	1	Restriction	alleviation	protein	Lar
Zn_Tnp_IS1595	PF12760.2	gi|15920500|ref|NP_376169.1|	-	0.016	15.0	1.6	0.045	13.5	1.1	1.7	1	1	0	1	1	1	0	Transposase	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|15920500|ref|NP_376169.1|	-	0.019	14.5	5.2	0.071	12.6	3.6	1.9	1	1	0	1	1	1	0	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|15920500|ref|NP_376169.1|	-	0.023	14.3	0.3	0.05	13.2	0.2	1.6	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
zf-ribbon_3	PF13248.1	gi|15920500|ref|NP_376169.1|	-	0.026	13.7	4.4	0.18	11.0	3.1	2.1	1	1	1	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|15920500|ref|NP_376169.1|	-	0.027	14.1	5.1	0.11	12.1	3.5	1.9	1	1	0	1	1	1	0	zinc-ribbon	domain
Zn-ribbon_8	PF09723.5	gi|15920500|ref|NP_376169.1|	-	0.041	13.8	0.4	0.082	12.8	0.3	1.5	1	0	0	1	1	1	0	Zinc	ribbon	domain
DUF4109	PF13397.1	gi|15920500|ref|NP_376169.1|	-	0.043	14.1	0.4	0.13	12.6	0.0	1.9	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4109)
DUF2387	PF09526.5	gi|15920500|ref|NP_376169.1|	-	0.076	12.9	0.1	0.076	12.9	0.1	2.0	2	0	0	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
zinc_ribbon_2	PF13240.1	gi|15920500|ref|NP_376169.1|	-	0.095	12.2	2.3	2.5	7.7	0.1	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
Rubredoxin	PF00301.15	gi|15920500|ref|NP_376169.1|	-	0.11	12.3	1.7	0.55	10.1	0.2	2.3	2	0	0	2	2	2	0	Rubredoxin
Ribosomal_L32p	PF01783.18	gi|15920500|ref|NP_376169.1|	-	0.26	11.4	1.5	0.86	9.8	1.0	1.9	1	1	0	1	1	1	0	Ribosomal	L32p	protein	family
Mu-like_Com	PF10122.4	gi|15920500|ref|NP_376169.1|	-	0.36	9.9	1.9	12	5.0	0.3	2.3	2	0	0	2	2	2	0	Mu-like	prophage	protein	Com
CpXC	PF14353.1	gi|15920500|ref|NP_376169.1|	-	0.53	10.2	3.0	13	5.8	0.2	2.2	1	1	1	2	2	2	0	CpXC	protein
zf-Mss51	PF13824.1	gi|15920500|ref|NP_376169.1|	-	0.55	10.1	2.9	1.2	9.1	0.2	2.3	1	1	1	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
DNA_RNApol_7kD	PF03604.8	gi|15920500|ref|NP_376169.1|	-	0.67	9.4	4.2	1.4	8.4	2.9	1.6	1	1	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
TF_Zn_Ribbon	PF08271.7	gi|15920500|ref|NP_376169.1|	-	0.7	9.2	7.4	0.31	10.4	1.5	2.7	2	1	1	3	3	3	0	TFIIB	zinc-binding
zf-C2H2_6	PF13912.1	gi|15920500|ref|NP_376169.1|	-	2	8.4	4.1	2.5	8.1	0.1	2.2	2	0	0	2	2	2	0	C2H2-type	zinc	finger
PcrB	PF01884.12	gi|15920502|ref|NP_376171.1|	-	1.2e-60	204.6	2.6	1.5e-60	204.3	1.8	1.0	1	0	0	1	1	1	1	PcrB	family
His_biosynth	PF00977.16	gi|15920502|ref|NP_376171.1|	-	0.00043	19.6	0.1	0.0007	18.9	0.1	1.3	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
Ribul_P_3_epim	PF00834.14	gi|15920502|ref|NP_376171.1|	-	0.0086	15.2	0.1	0.021	13.9	0.1	1.6	1	0	0	1	1	1	1	Ribulose-phosphate	3	epimerase	family
Trp_syntA	PF00290.15	gi|15920502|ref|NP_376171.1|	-	0.0091	14.5	0.1	0.016	13.7	0.1	1.4	1	0	0	1	1	1	1	Tryptophan	synthase	alpha	chain
IMPDH	PF00478.20	gi|15920502|ref|NP_376171.1|	-	0.06	12.2	0.0	0.11	11.3	0.0	1.3	1	0	0	1	1	1	0	IMP	dehydrogenase	/	GMP	reductase	domain
Sec61_beta	PF03911.11	gi|15920503|ref|NP_376172.1|	-	1.3e-16	60.0	2.1	1.5e-16	59.9	1.5	1.1	1	0	0	1	1	1	1	Sec61beta	family
ECF-ribofla_trS	PF07155.7	gi|15920503|ref|NP_376172.1|	-	0.0028	17.3	0.1	0.0035	17.0	0.1	1.0	1	0	0	1	1	1	1	ECF-type	riboflavin	transporter,	S	component
GNVR	PF13807.1	gi|15920503|ref|NP_376172.1|	-	0.0077	15.9	0.2	0.0095	15.6	0.2	1.2	1	0	0	1	1	1	1	G-rich	domain	on	putative	tyrosine	kinase
BatA	PF07584.6	gi|15920503|ref|NP_376172.1|	-	0.01	15.9	0.0	0.013	15.7	0.0	1.1	1	0	0	1	1	1	0	Aerotolerance	regulator	N-terminal
DUF367	PF04034.8	gi|15920504|ref|NP_376173.1|	-	3.1e-45	152.8	0.4	4.6e-45	152.3	0.1	1.3	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF367)
RLI	PF04068.10	gi|15920504|ref|NP_376173.1|	-	3.5e-13	48.8	0.1	5.4e-13	48.2	0.1	1.3	1	0	0	1	1	1	1	Possible	Fer4-like	domain	in	RNase	L	inhibitor,	RLI
AsnC_trans_reg	PF01037.16	gi|15920505|ref|NP_376174.1|	-	2e-17	62.6	0.8	2.2e-17	62.5	0.6	1.0	1	0	0	1	1	1	1	AsnC	family
HMA	PF00403.21	gi|15920505|ref|NP_376174.1|	-	0.027	14.6	0.3	0.039	14.0	0.2	1.3	1	0	0	1	1	1	0	Heavy-metal-associated	domain
GYD	PF08734.6	gi|15920505|ref|NP_376174.1|	-	0.06	13.0	0.1	0.068	12.9	0.1	1.2	1	0	0	1	1	1	0	GYD	domain
Alkyl_sulf_dimr	PF14863.1	gi|15920505|ref|NP_376174.1|	-	0.14	12.4	0.0	0.15	12.3	0.0	1.1	1	0	0	1	1	1	0	Alkyl	sulfatase	dimerisation
DUF1743	PF08489.6	gi|15920507|ref|NP_376176.1|	-	2.9e-38	130.2	0.0	5.3e-38	129.3	0.0	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1743)
tRNA_anti-codon	PF01336.20	gi|15920507|ref|NP_376176.1|	-	0.00064	19.5	1.9	0.0011	18.7	1.3	1.4	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
DNA_RNApol_7kD	PF03604.8	gi|15920507|ref|NP_376176.1|	-	0.0033	16.8	2.1	0.013	14.9	1.4	2.0	1	0	0	1	1	1	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
OrfB_Zn_ribbon	PF07282.6	gi|15920507|ref|NP_376176.1|	-	0.013	15.1	1.3	0.02	14.5	0.3	1.7	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
Zn_Tnp_IS1595	PF12760.2	gi|15920507|ref|NP_376176.1|	-	0.013	15.3	1.3	0.023	14.4	0.9	1.4	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
IBR	PF01485.16	gi|15920507|ref|NP_376176.1|	-	0.017	14.9	0.8	0.029	14.2	0.6	1.3	1	0	0	1	1	1	0	IBR	domain
Zn-ribbon_8	PF09723.5	gi|15920507|ref|NP_376176.1|	-	0.018	15.0	1.4	4.4	7.3	0.2	2.3	2	0	0	2	2	2	0	Zinc	ribbon	domain
tRNA_anti-like	PF12869.2	gi|15920507|ref|NP_376176.1|	-	0.042	13.3	2.5	0.077	12.4	1.8	1.4	1	0	0	1	1	1	0	tRNA_anti-like
Cnd1_N	PF12922.2	gi|15920507|ref|NP_376176.1|	-	0.12	11.9	0.0	0.2	11.2	0.0	1.3	1	0	0	1	1	1	0	non-SMC	mitotic	condensation	complex	subunit	1,	N-term
zf-H2C2_2	PF13465.1	gi|15920507|ref|NP_376176.1|	-	0.3	11.4	4.9	2.1	8.7	0.4	2.6	2	0	0	2	2	2	0	Zinc-finger	double	domain
Phage_integrase	PF00589.17	gi|15920508|ref|NP_376177.1|	-	3.1e-16	59.5	0.2	4.8e-15	55.6	0.0	2.4	2	0	0	2	2	2	1	Phage	integrase	family
HTH_23	PF13384.1	gi|15920508|ref|NP_376177.1|	-	0.00021	20.8	0.1	0.00074	19.0	0.1	2.0	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.1	gi|15920508|ref|NP_376177.1|	-	0.0029	17.5	0.2	0.0075	16.2	0.2	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
DUF4351	PF14261.1	gi|15920508|ref|NP_376177.1|	-	0.0039	17.0	0.3	3.4	7.6	0.0	3.5	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF4351)
HTH_3	PF01381.17	gi|15920508|ref|NP_376177.1|	-	0.0099	15.7	0.0	0.033	14.0	0.0	2.0	1	0	0	1	1	1	1	Helix-turn-helix
HTH_7	PF02796.10	gi|15920508|ref|NP_376177.1|	-	0.014	15.2	0.3	0.1	12.4	0.1	2.5	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	resolvase
DUF445	PF04286.7	gi|15920508|ref|NP_376177.1|	-	0.019	14.4	3.2	0.046	13.2	2.1	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF445)
HTH_38	PF13936.1	gi|15920508|ref|NP_376177.1|	-	0.028	13.9	0.0	0.097	12.2	0.0	1.9	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_19	PF12844.2	gi|15920508|ref|NP_376177.1|	-	0.051	13.6	0.5	0.3	11.1	0.0	2.6	3	0	0	3	3	3	0	Helix-turn-helix	domain
HTH_Tnp_IS1	PF12759.2	gi|15920508|ref|NP_376177.1|	-	0.096	12.1	0.1	6.7	6.2	0.0	2.7	2	0	0	2	2	2	0	InsA	C-terminal	domain
TBPIP	PF07106.8	gi|15920508|ref|NP_376177.1|	-	0.22	11.0	2.7	0.38	10.2	0.5	2.4	3	0	0	3	3	3	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
pRN1_helical	PF13010.1	gi|15920509|ref|NP_376178.1|	-	7.8e-42	142.0	4.9	7.8e-42	142.0	3.4	3.3	3	1	1	4	4	4	1	Primase	helical	domain
Prim-Pol	PF09250.6	gi|15920509|ref|NP_376178.1|	-	5.1e-28	98.0	0.0	8.9e-28	97.3	0.0	1.4	1	0	0	1	1	1	1	Bifunctional	DNA	primase/polymerase,	N-terminal
D5_N	PF08706.6	gi|15920509|ref|NP_376178.1|	-	1.7e-16	60.6	3.4	1.7e-16	60.6	2.3	3.0	3	1	0	3	3	3	1	D5	N	terminal	like
Pox_D5	PF03288.11	gi|15920509|ref|NP_376178.1|	-	4e-07	30.2	2.0	2e-06	27.9	0.1	3.3	3	0	0	3	3	3	1	Poxvirus	D5	protein-like
RFX_DNA_binding	PF02257.10	gi|15920509|ref|NP_376178.1|	-	5.5e-06	26.4	0.1	1.3e-05	25.2	0.1	1.6	1	0	0	1	1	1	1	RFX	DNA-binding	domain
zf-CCHH	PF10283.4	gi|15920510|ref|NP_376179.1|	-	0.048	13.5	0.9	0.078	12.8	0.6	1.3	1	0	0	1	1	1	0	Zinc-finger	(CX5CX6HX5H)	motif
Amb_V_allergen	PF03913.8	gi|15920510|ref|NP_376179.1|	-	0.37	10.5	2.6	0.36	10.5	1.0	1.6	1	1	1	2	2	2	0	Amb	V	Allergen
HTH_Mga	PF08280.6	gi|15920512|ref|NP_376181.1|	-	0.0017	18.0	0.2	0.0051	16.5	0.2	1.8	1	0	0	1	1	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_11	PF08279.7	gi|15920512|ref|NP_376181.1|	-	0.0029	17.2	0.2	0.0078	15.8	0.1	1.8	1	0	0	1	1	1	1	HTH	domain
HTH_17	PF12728.2	gi|15920512|ref|NP_376181.1|	-	0.064	13.5	0.0	0.16	12.2	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_28	PF13518.1	gi|15920512|ref|NP_376181.1|	-	0.067	13.2	0.0	0.15	12.0	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
FeoC	PF09012.5	gi|15920512|ref|NP_376181.1|	-	0.071	12.8	0.1	0.16	11.6	0.1	1.6	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
TFIIE_alpha	PF02002.12	gi|15920512|ref|NP_376181.1|	-	0.078	12.4	2.0	0.096	12.1	0.4	2.0	2	0	0	2	2	2	0	TFIIE	alpha	subunit
DUF2765	PF10963.3	gi|15920512|ref|NP_376181.1|	-	1.1	9.2	5.8	1	9.3	0.3	2.9	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF2765)
SSV1_ORF_D-335	PF07935.6	gi|15920513|ref|NP_376182.1|	-	3.9e-29	100.2	0.7	4.5e-29	99.9	0.5	1.1	1	0	0	1	1	1	1	ORF	D-335-like	protein
ABC_tran	PF00005.22	gi|15920514|ref|NP_376183.1|	-	3.3e-42	144.0	0.0	2.4e-21	76.4	0.0	2.5	2	0	0	2	2	2	2	ABC	transporter
SMC_N	PF02463.14	gi|15920514|ref|NP_376183.1|	-	9.1e-13	47.9	7.7	1.1e-05	24.7	1.6	4.1	3	1	0	3	3	3	2	RecF/RecN/SMC	N	terminal	domain
AAA_21	PF13304.1	gi|15920514|ref|NP_376183.1|	-	1e-12	48.6	16.3	5.1e-06	26.6	2.7	4.7	3	2	1	4	4	4	3	AAA	domain
RLI	PF04068.10	gi|15920514|ref|NP_376183.1|	-	2.7e-12	46.0	0.9	2.7e-12	46.0	0.6	1.8	2	0	0	2	2	1	1	Possible	Fer4-like	domain	in	RNase	L	inhibitor,	RLI
MobB	PF03205.9	gi|15920514|ref|NP_376183.1|	-	1.3e-07	31.4	0.3	0.011	15.3	0.1	3.6	3	0	0	3	3	3	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Fer4	PF00037.22	gi|15920514|ref|NP_376183.1|	-	7.1e-07	28.5	6.3	7.1e-07	28.5	4.4	2.6	3	0	0	3	3	2	1	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|15920514|ref|NP_376183.1|	-	1.1e-05	25.6	15.5	0.00042	20.6	4.1	1.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
AAA_15	PF13175.1	gi|15920514|ref|NP_376183.1|	-	1.2e-05	24.6	6.6	1.5	7.8	4.8	4.1	1	1	1	3	3	3	1	AAA	ATPase	domain
AAA_18	PF13238.1	gi|15920514|ref|NP_376183.1|	-	4.8e-05	23.6	1.6	0.43	10.9	0.3	3.2	2	1	0	2	2	2	2	AAA	domain
AAA_17	PF13207.1	gi|15920514|ref|NP_376183.1|	-	0.00012	22.8	6.4	0.018	15.8	0.2	3.4	2	2	0	2	2	2	1	AAA	domain
Fer4_21	PF14697.1	gi|15920514|ref|NP_376183.1|	-	0.00016	21.4	7.3	0.00027	20.7	5.1	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
AAA_23	PF13476.1	gi|15920514|ref|NP_376183.1|	-	0.00017	21.9	8.7	0.091	13.0	1.4	2.6	1	1	1	2	2	2	2	AAA	domain
Fer4_2	PF12797.2	gi|15920514|ref|NP_376183.1|	-	0.00029	20.5	3.6	0.00029	20.5	2.5	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|15920514|ref|NP_376183.1|	-	0.00037	20.2	3.5	0.00037	20.2	2.5	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Miro	PF08477.8	gi|15920514|ref|NP_376183.1|	-	0.00046	20.6	0.3	1	9.8	0.0	2.9	3	0	0	3	3	2	1	Miro-like	protein
Fer4_10	PF13237.1	gi|15920514|ref|NP_376183.1|	-	0.0009	18.9	10.5	0.0011	18.7	1.4	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
RNA_helicase	PF00910.17	gi|15920514|ref|NP_376183.1|	-	0.0011	19.1	0.0	0.51	10.5	0.0	2.6	2	0	0	2	2	2	1	RNA	helicase
AAA_29	PF13555.1	gi|15920514|ref|NP_376183.1|	-	0.0022	17.5	0.8	1.7	8.2	0.0	2.4	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
MMR_HSR1	PF01926.18	gi|15920514|ref|NP_376183.1|	-	0.0022	17.9	2.9	1.4	8.8	0.3	2.9	2	2	0	2	2	2	2	50S	ribosome-binding	GTPase
AAA_14	PF13173.1	gi|15920514|ref|NP_376183.1|	-	0.0028	17.5	5.7	0.58	10.0	0.1	3.4	3	1	0	3	3	2	2	AAA	domain
DUF258	PF03193.11	gi|15920514|ref|NP_376183.1|	-	0.0029	16.8	0.1	0.43	9.7	0.0	2.9	3	0	0	3	3	3	1	Protein	of	unknown	function,	DUF258
AAA	PF00004.24	gi|15920514|ref|NP_376183.1|	-	0.0046	17.1	0.0	0.23	11.6	0.0	2.6	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Dynamin_N	PF00350.18	gi|15920514|ref|NP_376183.1|	-	0.005	16.6	0.0	0.57	9.9	0.0	2.4	2	0	0	2	2	2	1	Dynamin	family
Fer4_16	PF13484.1	gi|15920514|ref|NP_376183.1|	-	0.0097	16.6	0.2	0.0097	16.6	0.1	2.3	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
NACHT	PF05729.7	gi|15920514|ref|NP_376183.1|	-	0.015	14.9	0.2	0.071	12.7	0.0	2.2	3	0	0	3	3	2	0	NACHT	domain
PRK	PF00485.13	gi|15920514|ref|NP_376183.1|	-	0.018	14.6	0.0	1.9	8.0	0.0	2.3	2	0	0	2	2	2	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_25	PF13481.1	gi|15920514|ref|NP_376183.1|	-	0.02	14.2	1.9	0.1	11.9	0.0	2.6	3	0	0	3	3	2	0	AAA	domain
VirE	PF05272.6	gi|15920514|ref|NP_376183.1|	-	0.021	14.2	0.0	4.4	6.7	0.0	2.4	2	0	0	2	2	2	0	Virulence-associated	protein	E
Fer4_9	PF13187.1	gi|15920514|ref|NP_376183.1|	-	0.024	14.9	7.9	0.097	12.9	5.5	1.9	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
AAA_16	PF13191.1	gi|15920514|ref|NP_376183.1|	-	0.031	14.2	0.3	0.65	9.9	0.0	2.5	2	2	0	2	2	2	0	AAA	ATPase	domain
Fer4_3	PF12798.2	gi|15920514|ref|NP_376183.1|	-	0.033	14.7	3.5	0.033	14.7	2.4	2.2	2	0	0	2	2	2	0	4Fe-4S	binding	domain
T2SE	PF00437.15	gi|15920514|ref|NP_376183.1|	-	0.042	12.7	1.0	1.2	8.0	0.0	2.5	2	1	0	2	2	2	0	Type	II/IV	secretion	system	protein
Spore_IV_A	PF09547.5	gi|15920514|ref|NP_376183.1|	-	0.052	12.2	0.4	1.4	7.4	0.0	2.2	2	0	0	2	2	2	0	Stage	IV	sporulation	protein	A	(spore_IV_A)
AAA_28	PF13521.1	gi|15920514|ref|NP_376183.1|	-	0.066	13.1	0.1	8.7	6.2	0.0	2.6	2	0	0	2	2	2	0	AAA	domain
AAA_33	PF13671.1	gi|15920514|ref|NP_376183.1|	-	0.071	12.9	0.5	0.66	9.8	0.0	2.8	2	2	0	2	2	2	0	AAA	domain
Rad17	PF03215.10	gi|15920514|ref|NP_376183.1|	-	0.075	11.7	0.3	7.4	5.1	0.0	2.9	2	2	1	3	3	3	0	Rad17	cell	cycle	checkpoint	protein
AAA_22	PF13401.1	gi|15920514|ref|NP_376183.1|	-	0.13	12.4	1.9	0.96	9.5	0.0	3.1	3	2	0	3	3	2	0	AAA	domain
ArgK	PF03308.11	gi|15920514|ref|NP_376183.1|	-	0.24	10.1	1.4	9.1	4.9	0.1	2.3	2	0	0	2	2	2	0	ArgK	protein
Fer4_8	PF13183.1	gi|15920514|ref|NP_376183.1|	-	0.25	11.3	4.6	0.097	12.7	0.8	1.7	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|15920514|ref|NP_376183.1|	-	1.1	9.6	6.0	0.33	11.3	0.9	2.2	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|15920514|ref|NP_376183.1|	-	1.1	9.6	9.4	0.39	11.1	2.8	2.4	1	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|15920514|ref|NP_376183.1|	-	2.2	8.8	11.3	0.12	12.8	1.8	2.2	2	0	0	2	2	2	0	4Fe-4S	binding	domain
FBPase_3	PF01950.11	gi|15920515|ref|NP_376184.1|	-	6.5e-184	611.0	0.0	7.5e-184	610.8	0.0	1.0	1	0	0	1	1	1	1	Fructose-1,6-bisphosphatase
Ribosomal_S17e	PF00833.13	gi|15920516|ref|NP_376185.1|	-	1.2e-16	60.5	1.8	1.3e-16	60.4	1.3	1.0	1	0	0	1	1	1	1	Ribosomal	S17
YcbB	PF08664.5	gi|15920516|ref|NP_376185.1|	-	0.0083	15.9	0.8	0.0085	15.8	0.6	1.0	1	0	0	1	1	1	1	YcbB	domain
LEDGF	PF11467.3	gi|15920516|ref|NP_376185.1|	-	0.015	14.9	1.5	0.018	14.7	0.5	1.6	1	1	1	2	2	2	0	Lens	epithelium-derived	growth	factor	(LEDGF)
RE_Eco47II	PF09553.5	gi|15920516|ref|NP_376185.1|	-	0.043	12.9	1.2	0.046	12.8	0.8	1.1	1	0	0	1	1	1	0	Eco47II	restriction	endonuclease
Hydant_A_N	PF05378.8	gi|15920516|ref|NP_376185.1|	-	0.047	13.1	0.3	0.052	13.0	0.2	1.1	1	0	0	1	1	1	0	Hydantoinase/oxoprolinase	N-terminal	region
PNPase	PF03726.9	gi|15920516|ref|NP_376185.1|	-	0.074	13.3	3.4	0.09	13.0	0.5	1.9	1	1	1	2	2	2	0	Polyribonucleotide	nucleotidyltransferase,	RNA	binding	domain
Apolipoprotein	PF01442.13	gi|15920516|ref|NP_376185.1|	-	0.081	12.4	0.5	0.1	12.1	0.3	1.1	1	0	0	1	1	1	0	Apolipoprotein	A1/A4/E	domain
ERp29	PF07749.7	gi|15920516|ref|NP_376185.1|	-	0.91	10.1	4.2	1.9	9.1	2.9	1.6	1	1	0	1	1	1	0	Endoplasmic	reticulum	protein	ERp29,	C-terminal	domain
Telomerase_RBD	PF12009.3	gi|15920517|ref|NP_376186.1|	-	0.12	12.2	1.5	0.25	11.2	0.3	1.8	1	1	1	2	2	2	0	Telomerase	ribonucleoprotein	complex	-	RNA	binding	domain
DUF87	PF01935.12	gi|15920518|ref|NP_376187.1|	-	3.9e-37	128.2	0.8	3.9e-37	128.2	0.5	1.7	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF87
AAA_10	PF12846.2	gi|15920518|ref|NP_376187.1|	-	2.3e-22	79.8	3.3	9.2e-22	77.8	2.3	1.8	1	1	0	1	1	1	1	AAA-like	domain
TrwB_AAD_bind	PF10412.4	gi|15920518|ref|NP_376187.1|	-	1.4e-08	33.7	0.0	2.7e-06	26.2	0.0	2.1	2	0	0	2	2	2	2	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
DUF853	PF05872.7	gi|15920518|ref|NP_376187.1|	-	2.3e-07	29.5	0.0	0.0039	15.6	0.0	2.1	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
AAA_17	PF13207.1	gi|15920518|ref|NP_376187.1|	-	0.00026	21.7	0.1	0.0046	17.7	0.0	2.6	2	0	0	2	2	2	1	AAA	domain
T4SS-DNA_transf	PF02534.9	gi|15920518|ref|NP_376187.1|	-	0.00029	19.5	0.0	0.00095	17.8	0.0	1.7	2	0	0	2	2	2	1	Type	IV	secretory	system	Conjugative	DNA	transfer
Zot	PF05707.7	gi|15920518|ref|NP_376187.1|	-	0.00039	19.9	0.8	0.002	17.6	0.1	2.1	2	0	0	2	2	2	1	Zonular	occludens	toxin	(Zot)
AAA_18	PF13238.1	gi|15920518|ref|NP_376187.1|	-	0.0026	18.0	0.6	0.026	14.8	0.0	2.7	2	0	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|15920518|ref|NP_376187.1|	-	0.024	14.7	0.1	6.7	6.8	0.0	2.5	2	0	0	2	2	2	0	AAA	domain
Torsin	PF06309.6	gi|15920518|ref|NP_376187.1|	-	0.026	14.4	0.1	0.075	12.9	0.0	1.7	1	0	0	1	1	1	0	Torsin
CbiA	PF01656.18	gi|15920518|ref|NP_376187.1|	-	0.029	13.7	0.2	0.083	12.2	0.1	2.0	1	1	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
DEAD	PF00270.24	gi|15920518|ref|NP_376187.1|	-	0.057	12.9	0.0	0.12	11.8	0.0	1.5	1	1	0	1	1	1	0	DEAD/DEAH	box	helicase
Zeta_toxin	PF06414.7	gi|15920518|ref|NP_376187.1|	-	0.057	12.5	0.0	0.14	11.2	0.0	1.6	2	0	0	2	2	2	0	Zeta	toxin
MobB	PF03205.9	gi|15920518|ref|NP_376187.1|	-	0.066	12.9	0.0	0.15	11.7	0.0	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ABC_tran	PF00005.22	gi|15920518|ref|NP_376187.1|	-	0.079	13.2	0.1	0.32	11.2	0.0	2.0	2	0	0	2	2	2	0	ABC	transporter
FtsK_SpoIIIE	PF01580.13	gi|15920518|ref|NP_376187.1|	-	0.11	12.0	0.0	0.18	11.2	0.0	1.3	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
Cpn60_TCP1	PF00118.19	gi|15920519|ref|NP_376188.1|	-	3.4e-167	556.9	10.8	4.1e-167	556.6	7.5	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
TF_Zn_Ribbon	PF08271.7	gi|15920520|ref|NP_376189.1|	-	3.5e-13	48.6	2.3	7.8e-13	47.5	1.6	1.6	1	0	0	1	1	1	1	TFIIB	zinc-binding
Ribosomal_S27e	PF01667.12	gi|15920520|ref|NP_376189.1|	-	0.0011	18.4	0.2	0.0025	17.3	0.1	1.6	1	0	0	1	1	1	1	Ribosomal	protein	S27
RRN7	PF11781.3	gi|15920520|ref|NP_376189.1|	-	0.0063	15.9	0.2	0.0092	15.4	0.1	1.3	1	0	0	1	1	1	1	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
A2L_zn_ribbon	PF08792.5	gi|15920520|ref|NP_376189.1|	-	0.01	15.3	2.7	0.019	14.4	1.9	1.4	1	0	0	1	1	1	1	A2L	zinc	ribbon	domain
zf-ribbon_3	PF13248.1	gi|15920520|ref|NP_376189.1|	-	0.018	14.2	0.7	0.031	13.4	0.5	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
SusE	PF14292.1	gi|15920520|ref|NP_376189.1|	-	0.023	14.5	0.2	0.046	13.5	0.2	1.5	1	0	0	1	1	1	0	SusE	outer	membrane	protein
Lar_restr_allev	PF14354.1	gi|15920520|ref|NP_376189.1|	-	0.037	14.3	0.3	0.061	13.6	0.2	1.3	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
Zn_Tnp_IS1595	PF12760.2	gi|15920520|ref|NP_376189.1|	-	0.21	11.4	1.1	0.48	10.2	0.8	1.6	1	1	0	1	1	1	0	Transposase	zinc-ribbon	domain
DUF4206	PF13901.1	gi|15920520|ref|NP_376189.1|	-	0.52	9.8	5.7	0.62	9.5	0.2	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4206)
PhnA_Zn_Ribbon	PF08274.7	gi|15920520|ref|NP_376189.1|	-	2.7	7.8	5.4	6.9	6.5	3.7	1.7	1	1	0	1	1	1	0	PhnA	Zinc-Ribbon
tRNA_int_endo	PF01974.12	gi|15920521|ref|NP_376190.1|	-	2e-08	33.8	0.1	2.4e-08	33.6	0.1	1.2	1	0	0	1	1	1	1	tRNA	intron	endonuclease,	catalytic	C-terminal	domain
Sen15	PF09631.5	gi|15920521|ref|NP_376190.1|	-	0.00016	21.8	0.1	0.00018	21.6	0.1	1.1	1	0	0	1	1	1	1	Sen15	protein
TLC	PF03219.9	gi|15920521|ref|NP_376190.1|	-	0.018	13.5	0.0	0.019	13.4	0.0	1.0	1	0	0	1	1	1	0	TLC	ATP/ADP	transporter
DUF383	PF04063.9	gi|15920521|ref|NP_376190.1|	-	0.069	12.6	0.0	0.082	12.4	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF383)
tRNA-synt_His	PF13393.1	gi|15920522|ref|NP_376191.1|	-	4.3e-69	232.9	0.0	5.2e-69	232.6	0.0	1.1	1	0	0	1	1	1	1	Histidyl-tRNA	synthetase
tRNA-synt_2b	PF00587.20	gi|15920522|ref|NP_376191.1|	-	6.1e-22	78.0	0.1	1.2e-21	77.0	0.1	1.5	1	1	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|15920522|ref|NP_376191.1|	-	2.4e-13	49.8	0.4	7e-13	48.3	0.3	1.8	1	0	0	1	1	1	1	Anticodon	binding	domain
tRNA-synt_2d	PF01409.15	gi|15920522|ref|NP_376191.1|	-	5.8e-07	28.9	0.0	7.3e-06	25.3	0.0	2.1	2	0	0	2	2	2	1	tRNA	synthetases	class	II	core	domain	(F)
HGTP_anticodon2	PF12745.2	gi|15920522|ref|NP_376191.1|	-	2.2e-06	27.0	0.9	3.2e-06	26.4	0.6	1.2	1	0	0	1	1	1	1	Anticodon	binding	domain	of	tRNAs
Proteasome	PF00227.21	gi|15920523|ref|NP_376192.1|	-	3e-49	166.9	0.0	3.5e-49	166.6	0.0	1.0	1	0	0	1	1	1	1	Proteasome	subunit
DUF3373	PF11853.3	gi|15920524|ref|NP_376193.1|	-	0.15	10.5	0.0	0.16	10.4	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3373)
Lsm_C	PF14894.1	gi|15920525|ref|NP_376194.1|	-	2.4e-29	100.6	0.2	3.9e-29	99.9	0.1	1.3	1	0	0	1	1	1	1	Lsm	C-terminal
LSM	PF01423.17	gi|15920525|ref|NP_376194.1|	-	0.00018	21.0	0.2	0.00041	19.8	0.2	1.6	1	0	0	1	1	1	1	LSM	domain
Imm28	PF15574.1	gi|15920525|ref|NP_376194.1|	-	0.069	12.7	0.0	0.11	12.0	0.0	1.2	1	0	0	1	1	1	0	Immunity	protein	28
TGT	PF01702.13	gi|15920526|ref|NP_376195.1|	-	7.2e-47	159.6	0.0	1e-46	159.1	0.0	1.2	1	0	0	1	1	1	1	Queuine	tRNA-ribosyltransferase
DUF763	PF05559.6	gi|15920526|ref|NP_376195.1|	-	0.038	12.9	0.0	0.066	12.1	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF763)
PAC2	PF09754.4	gi|15920527|ref|NP_376196.1|	-	4.2e-39	134.6	0.0	5e-39	134.4	0.0	1.0	1	0	0	1	1	1	1	PAC2	family
PUA	PF01472.15	gi|15920528|ref|NP_376197.1|	-	1e-18	66.7	0.3	1.5e-18	66.2	0.2	1.3	1	0	0	1	1	1	1	PUA	domain
TGT_C2	PF14810.1	gi|15920528|ref|NP_376197.1|	-	2.3e-14	53.0	0.0	4.7e-14	51.9	0.0	1.5	1	0	0	1	1	1	1	Patch-forming	domain	C2	of	tRNA-guanine	transglycosylase
AAA	PF00004.24	gi|15920529|ref|NP_376198.1|	-	1.2e-29	103.1	0.1	2.1e-29	102.3	0.1	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_2	PF07724.9	gi|15920529|ref|NP_376198.1|	-	0.0029	17.5	0.4	0.0056	16.6	0.0	1.6	2	0	0	2	2	2	1	AAA	domain	(Cdc48	subfamily)
TFIID-18kDa	PF02269.11	gi|15920529|ref|NP_376198.1|	-	0.077	12.8	0.0	0.14	11.9	0.0	1.4	1	0	0	1	1	1	0	Transcription	initiation	factor	IID,	18kD	subunit
CBFD_NFYB_HMF	PF00808.18	gi|15920529|ref|NP_376198.1|	-	0.087	12.9	0.2	5.1	7.2	0.0	2.3	2	0	0	2	2	2	0	Histone-like	transcription	factor	(CBF/NF-Y)	and	archaeal	histone
HTH_3	PF01381.17	gi|15920530|ref|NP_376199.1|	-	1.7e-12	46.9	1.6	2.9e-12	46.2	1.1	1.4	1	0	0	1	1	1	1	Helix-turn-helix
HTH_31	PF13560.1	gi|15920530|ref|NP_376199.1|	-	4.3e-11	42.8	0.0	7.4e-11	42.0	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_19	PF12844.2	gi|15920530|ref|NP_376199.1|	-	7.9e-11	41.8	0.6	3.1e-10	39.9	0.4	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_25	PF13413.1	gi|15920530|ref|NP_376199.1|	-	1.9e-07	30.6	0.4	4e-07	29.5	0.3	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
DUF1041	PF06292.12	gi|15920530|ref|NP_376199.1|	-	0.00069	19.7	1.2	0.0012	19.0	0.8	1.3	1	0	0	1	1	1	1	Domain	of	Unknown	Function	(DUF1041)
HTH_37	PF13744.1	gi|15920530|ref|NP_376199.1|	-	0.0014	18.3	2.0	0.0048	16.6	0.9	2.1	1	1	1	2	2	2	1	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|15920530|ref|NP_376199.1|	-	0.0063	16.1	0.4	0.031	13.9	0.1	2.2	2	0	0	2	2	2	1	HTH	domain
RPA_C	PF08784.6	gi|15920530|ref|NP_376199.1|	-	0.008	16.5	0.1	0.012	15.9	0.1	1.3	1	0	0	1	1	1	1	Replication	protein	A	C	terminal
HTH_23	PF13384.1	gi|15920530|ref|NP_376199.1|	-	0.008	15.7	0.0	0.018	14.7	0.0	1.6	1	0	0	1	1	1	1	Homeodomain-like	domain
GvpH	PF05455.6	gi|15920530|ref|NP_376199.1|	-	0.018	14.7	0.2	0.02	14.5	0.1	1.1	1	0	0	1	1	1	0	GvpH
Death	PF00531.17	gi|15920530|ref|NP_376199.1|	-	0.028	14.1	0.1	0.049	13.4	0.1	1.4	1	0	0	1	1	1	0	Death	domain
HTH_26	PF13443.1	gi|15920530|ref|NP_376199.1|	-	0.037	14.2	0.9	0.077	13.2	0.1	1.9	2	0	0	2	2	2	0	Cro/C1-type	HTH	DNA-binding	domain
Sigma70_r4	PF04545.11	gi|15920530|ref|NP_376199.1|	-	0.044	13.0	0.2	0.095	12.0	0.1	1.6	1	0	0	1	1	1	0	Sigma-70,	region	4
DZR	PF12773.2	gi|15920530|ref|NP_376199.1|	-	0.046	13.5	0.2	0.081	12.7	0.1	1.5	1	0	0	1	1	1	0	Double	zinc	ribbon
HTH_38	PF13936.1	gi|15920530|ref|NP_376199.1|	-	0.05	13.1	0.0	0.095	12.2	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
Neugrin	PF06413.6	gi|15920530|ref|NP_376199.1|	-	0.065	13.0	1.4	0.079	12.7	0.1	1.6	1	1	0	1	1	1	0	Neugrin
Sigma70_r4_2	PF08281.7	gi|15920530|ref|NP_376199.1|	-	0.088	12.2	0.0	0.16	11.4	0.0	1.4	1	0	0	1	1	1	0	Sigma-70,	region	4
PIN_2	PF10130.4	gi|15920530|ref|NP_376199.1|	-	0.51	10.3	3.0	2.5	8.1	1.8	1.9	1	1	1	2	2	2	0	PIN	domain
Zn_ribbon_2	PF12674.2	gi|15920530|ref|NP_376199.1|	-	1.1	9.6	4.0	4.7	7.6	2.7	2.2	1	1	0	1	1	1	0	Putative	zinc	ribbon	domain
ABC_tran_2	PF12848.2	gi|15920530|ref|NP_376199.1|	-	1.2	8.9	8.1	0.12	12.2	1.2	2.0	2	0	0	2	2	2	0	ABC	transporter
MMR_HSR1	PF01926.18	gi|15920531|ref|NP_376200.1|	-	6.6e-20	71.2	0.1	1.7e-19	69.9	0.1	1.7	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.13	gi|15920531|ref|NP_376200.1|	-	2e-11	43.4	1.9	2e-11	43.4	1.3	1.9	2	1	0	2	2	2	1	Ferrous	iron	transport	protein	B
GTP_EFTU	PF00009.22	gi|15920531|ref|NP_376200.1|	-	1.6e-09	37.4	1.0	1.8e-06	27.5	0.1	2.4	1	1	1	2	2	2	2	Elongation	factor	Tu	GTP	binding	domain
GTP-bdg_N	PF13167.1	gi|15920531|ref|NP_376200.1|	-	3.6e-08	33.4	0.4	1.2e-07	31.7	0.3	1.9	1	0	0	1	1	1	1	GTP-binding	GTPase	N-terminal
Arf	PF00025.16	gi|15920531|ref|NP_376200.1|	-	3.2e-06	26.4	1.6	1.6e-05	24.2	0.9	2.3	1	1	0	1	1	1	1	ADP-ribosylation	factor	family
Miro	PF08477.8	gi|15920531|ref|NP_376200.1|	-	4.3e-06	27.2	0.0	1.3e-05	25.6	0.0	1.9	1	0	0	1	1	1	1	Miro-like	protein
SRPRB	PF09439.5	gi|15920531|ref|NP_376200.1|	-	9.3e-06	24.9	0.7	1.6e-05	24.2	0.2	1.6	1	1	0	1	1	1	1	Signal	recognition	particle	receptor	beta	subunit
Dynamin_N	PF00350.18	gi|15920531|ref|NP_376200.1|	-	0.00076	19.3	0.1	0.14	11.9	0.0	2.8	1	1	1	2	2	2	1	Dynamin	family
ABC_tran	PF00005.22	gi|15920531|ref|NP_376200.1|	-	0.01	16.1	0.2	0.034	14.4	0.0	1.9	1	1	1	2	2	2	0	ABC	transporter
DUF2774	PF11242.3	gi|15920531|ref|NP_376200.1|	-	0.027	14.4	0.0	0.11	12.5	0.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2774)
PduV-EutP	PF10662.4	gi|15920531|ref|NP_376200.1|	-	0.048	13.1	0.1	4.1	6.8	0.0	2.4	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_23	PF13476.1	gi|15920531|ref|NP_376200.1|	-	0.12	12.6	14.9	0.33	11.2	0.8	2.9	2	1	1	3	3	3	0	AAA	domain
CbiA	PF01656.18	gi|15920531|ref|NP_376200.1|	-	0.71	9.2	3.7	0.18	11.1	0.1	1.8	2	1	1	3	3	3	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Trm56	PF01994.11	gi|15920532|ref|NP_376201.1|	-	1e-52	176.9	0.3	1.2e-52	176.7	0.2	1.0	1	0	0	1	1	1	1	tRNA	ribose	2'-O-methyltransferase,	aTrm56
TFIIE_alpha	PF02002.12	gi|15920533|ref|NP_376202.1|	-	3.1e-20	71.6	8.1	3.1e-20	71.6	5.6	1.7	2	0	0	2	2	2	1	TFIIE	alpha	subunit
TrmB	PF01978.14	gi|15920533|ref|NP_376202.1|	-	0.0019	17.8	0.1	0.0044	16.7	0.0	1.6	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
IF2_N	PF04760.10	gi|15920533|ref|NP_376202.1|	-	0.0066	16.0	0.7	0.076	12.6	0.1	2.3	2	0	0	2	2	2	1	Translation	initiation	factor	IF-2,	N-terminal	region
HTH_9	PF08221.6	gi|15920533|ref|NP_376202.1|	-	0.008	16.0	0.1	0.016	15.0	0.0	1.6	2	0	0	2	2	2	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
Zn_Tnp_IS1595	PF12760.2	gi|15920533|ref|NP_376202.1|	-	0.012	15.4	0.0	0.025	14.3	0.0	1.5	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
Phage_rep_org_N	PF09681.5	gi|15920533|ref|NP_376202.1|	-	0.012	15.1	0.8	0.026	14.1	0.1	1.8	2	0	0	2	2	2	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
zf-Mss51	PF13824.1	gi|15920533|ref|NP_376202.1|	-	0.024	14.4	1.0	0.08	12.8	0.6	2.0	1	1	0	1	1	1	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
DNA_ligase_ZBD	PF03119.11	gi|15920533|ref|NP_376202.1|	-	0.028	14.1	0.3	0.074	12.7	0.1	1.8	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
HTH_11	PF08279.7	gi|15920533|ref|NP_376202.1|	-	0.044	13.4	0.3	0.044	13.4	0.2	1.7	2	0	0	2	2	2	0	HTH	domain
TF_Zn_Ribbon	PF08271.7	gi|15920533|ref|NP_376202.1|	-	0.044	13.0	0.3	0.1	11.9	0.2	1.7	1	0	0	1	1	1	0	TFIIB	zinc-binding
zf-C4_Topoisom	PF01396.14	gi|15920533|ref|NP_376202.1|	-	0.047	13.1	0.4	0.11	12.0	0.3	1.7	1	0	0	1	1	1	0	Topoisomerase	DNA	binding	C4	zinc	finger
DUF1610	PF07754.6	gi|15920533|ref|NP_376202.1|	-	0.055	13.6	0.3	0.055	13.6	0.2	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
zf-ISL3	PF14690.1	gi|15920533|ref|NP_376202.1|	-	0.078	13.0	0.1	0.19	11.7	0.0	1.7	1	0	0	1	1	1	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
HTH_20	PF12840.2	gi|15920533|ref|NP_376202.1|	-	0.11	12.2	0.0	0.32	10.8	0.0	1.8	2	0	0	2	2	2	0	Helix-turn-helix	domain
Phage_terminase	PF10668.4	gi|15920533|ref|NP_376202.1|	-	0.12	12.1	0.1	0.37	10.6	0.1	1.8	1	0	0	1	1	1	0	Phage	terminase	small	subunit
Rad50_zn_hook	PF04423.9	gi|15920533|ref|NP_376202.1|	-	0.41	10.1	6.1	2.6	7.5	1.4	3.0	2	1	0	2	2	2	0	Rad50	zinc	hook	motif
zinc_ribbon_2	PF13240.1	gi|15920533|ref|NP_376202.1|	-	2.8	7.5	5.1	0.39	10.2	0.5	1.8	2	0	0	2	2	2	0	zinc-ribbon	domain
DNA_methylase	PF00145.12	gi|15920534|ref|NP_376203.1|	-	3.5e-54	184.1	0.0	5e-52	177.0	0.0	2.0	1	1	0	1	1	1	1	C-5	cytosine-specific	DNA	methylase
Methyltransf_15	PF09445.5	gi|15920534|ref|NP_376203.1|	-	7.2e-05	22.3	0.0	0.00012	21.6	0.0	1.4	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_26	PF13659.1	gi|15920534|ref|NP_376203.1|	-	9.2e-05	22.4	0.0	0.00014	21.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
DUF2122	PF09895.4	gi|15920535|ref|NP_376204.1|	-	2.7e-39	133.6	0.0	3.6e-39	133.2	0.0	1.1	1	0	0	1	1	1	1	RecB-family	nuclease	(DUF2122)
SpoU_methylase	PF00588.14	gi|15920535|ref|NP_376204.1|	-	0.015	15.1	0.0	0.018	14.8	0.0	1.1	1	0	0	1	1	1	0	SpoU	rRNA	Methylase	family
Glyco_hydro_68	PF02435.11	gi|15920535|ref|NP_376204.1|	-	0.093	11.4	0.0	0.11	11.2	0.0	1.1	1	0	0	1	1	1	0	Levansucrase/Invertase
NTP_transf_2	PF01909.18	gi|15920536|ref|NP_376205.1|	-	0.00018	21.7	0.6	0.00023	21.4	0.4	1.4	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
HEPN	PF05168.9	gi|15920537|ref|NP_376206.1|	-	2.4e-24	85.4	0.2	2.8e-24	85.2	0.2	1.0	1	0	0	1	1	1	1	HEPN	domain
MFS_1	PF07690.11	gi|15920538|ref|NP_376207.1|	-	1.9e-27	95.9	40.2	5.5e-16	58.2	17.2	2.5	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|15920538|ref|NP_376207.1|	-	9.7e-13	47.4	38.9	2.4e-10	39.6	12.7	2.9	2	1	0	2	2	2	2	Sugar	(and	other)	transporter
DUF791	PF05631.9	gi|15920538|ref|NP_376207.1|	-	0.0017	17.1	5.5	0.0017	17.1	3.8	2.1	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF791)
MFS_3	PF05977.8	gi|15920538|ref|NP_376207.1|	-	0.38	8.8	10.9	0.19	9.8	0.4	3.0	2	1	0	2	2	2	0	Transmembrane	secretion	effector
AdoHcyase	PF05221.12	gi|15920541|ref|NP_376210.1|	-	2.1e-74	249.8	0.1	2.6e-74	249.5	0.0	1.0	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase
AdoHcyase_NAD	PF00670.16	gi|15920541|ref|NP_376210.1|	-	3.8e-58	195.9	0.3	6.7e-58	195.1	0.2	1.4	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.14	gi|15920541|ref|NP_376210.1|	-	3.3e-08	32.9	0.4	7.7e-08	31.6	0.3	1.6	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
IlvN	PF07991.7	gi|15920541|ref|NP_376210.1|	-	5.8e-06	25.7	0.2	1.2e-05	24.7	0.1	1.4	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
TrkA_N	PF02254.13	gi|15920541|ref|NP_376210.1|	-	0.00079	19.4	0.1	0.0015	18.5	0.1	1.5	1	0	0	1	1	1	1	TrkA-N	domain
Oxidored_nitro	PF00148.14	gi|15920541|ref|NP_376210.1|	-	0.0046	15.6	0.8	0.075	11.6	0.1	2.1	2	0	0	2	2	2	1	Nitrogenase	component	1	type	Oxidoreductase
3HCDH_N	PF02737.13	gi|15920541|ref|NP_376210.1|	-	0.052	13.1	0.9	0.1	12.2	0.4	1.7	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Peptidase_M35	PF02102.10	gi|15920541|ref|NP_376210.1|	-	0.071	11.7	0.0	0.11	11.1	0.0	1.2	1	0	0	1	1	1	0	Deuterolysin	metalloprotease	(M35)	family
AlaDh_PNT_C	PF01262.16	gi|15920541|ref|NP_376210.1|	-	0.13	11.8	0.5	0.36	10.3	0.3	1.8	1	1	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
SSV1_ORF_D-335	PF07935.6	gi|15920542|ref|NP_376211.1|	-	7.4e-33	112.1	0.7	8.6e-33	111.9	0.5	1.0	1	0	0	1	1	1	1	ORF	D-335-like	protein
Beta-Casp	PF10996.3	gi|15920543|ref|NP_376212.1|	-	7.5e-33	113.1	0.0	4.3e-32	110.7	0.0	2.3	2	0	0	2	2	2	1	Beta-Casp	domain
Lactamase_B	PF00753.22	gi|15920543|ref|NP_376212.1|	-	1.2e-25	90.3	1.1	2.5e-25	89.2	0.8	1.5	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|15920543|ref|NP_376212.1|	-	5.6e-13	48.8	0.2	2.2e-12	46.9	0.1	2.0	3	0	0	3	3	3	1	Beta-lactamase	superfamily	domain
RMMBL	PF07521.7	gi|15920543|ref|NP_376212.1|	-	1.8e-12	46.8	0.0	9.9e-12	44.4	0.0	2.4	3	0	0	3	3	3	1	RNA-metabolising	metallo-beta-lactamase
Lactamase_B_3	PF13483.1	gi|15920543|ref|NP_376212.1|	-	7.3e-05	22.5	0.0	0.00038	20.2	0.0	2.1	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
KH_2	PF07650.12	gi|15920543|ref|NP_376212.1|	-	0.0021	17.6	1.4	0.0021	17.6	0.9	3.8	2	1	0	3	3	3	1	KH	domain
Fe-ADH_2	PF13685.1	gi|15920544|ref|NP_376213.1|	-	7.2e-65	218.7	0.3	9.1e-65	218.4	0.2	1.1	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH	PF00465.14	gi|15920544|ref|NP_376213.1|	-	4.7e-24	84.7	1.4	1.6e-23	83.0	1.0	1.6	1	1	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
DHQ_synthase	PF01761.15	gi|15920544|ref|NP_376213.1|	-	2.3e-13	49.6	0.3	8.8e-08	31.3	0.0	2.6	2	1	0	2	2	2	2	3-dehydroquinate	synthase
HHH_4	PF14490.1	gi|15920544|ref|NP_376213.1|	-	0.022	14.4	0.1	19	5.1	0.0	3.3	3	0	0	3	3	3	0	Helix-hairpin-helix	containing	domain
FKBP_C	PF00254.23	gi|15920545|ref|NP_376214.1|	-	1.6e-18	66.4	0.1	4.9e-18	64.9	0.1	1.8	2	1	0	2	2	2	1	FKBP-type	peptidyl-prolyl	cis-trans	isomerase
Ribosomal_L37e	PF01907.14	gi|15920546|ref|NP_376215.1|	-	1.7e-28	98.1	9.2	1.9e-28	98.0	6.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L37e
DZR	PF12773.2	gi|15920546|ref|NP_376215.1|	-	0.014	15.1	0.9	0.018	14.8	0.6	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
GCC2_GCC3	PF07699.8	gi|15920546|ref|NP_376215.1|	-	0.035	13.6	1.3	0.048	13.2	0.9	1.3	1	0	0	1	1	1	0	GCC2	and	GCC3
HypA	PF01155.14	gi|15920546|ref|NP_376215.1|	-	0.052	13.2	0.5	0.058	13.0	0.3	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
FYVE_2	PF02318.11	gi|15920546|ref|NP_376215.1|	-	0.16	11.8	1.6	0.18	11.7	1.1	1.0	1	0	0	1	1	1	0	FYVE-type	zinc	finger
Ribosomal_L32p	PF01783.18	gi|15920546|ref|NP_376215.1|	-	0.36	11.0	6.1	0.66	10.1	3.1	1.9	1	1	1	2	2	2	0	Ribosomal	L32p	protein	family
DNA_RNApol_7kD	PF03604.8	gi|15920546|ref|NP_376215.1|	-	0.84	9.1	5.6	0.46	9.9	0.3	2.2	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-ribbon_3	PF13248.1	gi|15920546|ref|NP_376215.1|	-	1.4	8.2	5.4	7.8	5.8	3.7	2.0	1	1	0	1	1	1	0	zinc-ribbon	domain
Spermine_synth	PF01564.12	gi|15920547|ref|NP_376216.1|	-	3.4e-63	212.8	0.1	4.5e-63	212.4	0.1	1.1	1	0	0	1	1	1	1	Spermine/spermidine	synthase
Methyltransf_12	PF08242.7	gi|15920547|ref|NP_376216.1|	-	8.6e-06	26.1	0.0	1.8e-05	25.0	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|15920547|ref|NP_376216.1|	-	0.00011	22.4	0.0	0.00033	20.9	0.0	1.9	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|15920547|ref|NP_376216.1|	-	0.00037	21.0	0.0	0.00064	20.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|15920547|ref|NP_376216.1|	-	0.001	19.0	0.0	0.0015	18.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
AAA_31	PF13614.1	gi|15920547|ref|NP_376216.1|	-	0.0024	17.8	0.0	0.0059	16.5	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
Methyltransf_31	PF13847.1	gi|15920547|ref|NP_376216.1|	-	0.0044	16.6	0.0	0.0069	15.9	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|15920547|ref|NP_376216.1|	-	0.01	15.2	0.0	0.016	14.5	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	small	domain
Methyltransf_30	PF05430.6	gi|15920547|ref|NP_376216.1|	-	0.01	15.4	0.0	0.021	14.5	0.0	1.5	1	0	0	1	1	1	0	S-adenosyl-L-methionine-dependent	methyltransferase
Methyltransf_11	PF08241.7	gi|15920547|ref|NP_376216.1|	-	0.019	15.4	0.0	0.035	14.6	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
DUF43	PF01861.11	gi|15920547|ref|NP_376216.1|	-	0.029	13.3	0.1	0.044	12.7	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF43
Methyltransf_5	PF01795.14	gi|15920547|ref|NP_376216.1|	-	0.058	12.6	0.0	0.094	11.9	0.0	1.3	1	0	0	1	1	1	0	MraW	methylase	family
Methyltransf_2	PF00891.13	gi|15920547|ref|NP_376216.1|	-	0.082	12.0	0.0	0.14	11.3	0.0	1.4	1	0	0	1	1	1	0	O-methyltransferase
DUF3903	PF13043.1	gi|15920547|ref|NP_376216.1|	-	0.083	12.3	0.0	2.4	7.7	0.0	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3903)
NTP_transf_5	PF14907.1	gi|15920548|ref|NP_376217.1|	-	0.095	12.0	0.1	0.72	9.1	0.0	2.0	2	0	0	2	2	2	0	Uncharacterised	nucleotidyltransferase
Molybdopterin	PF00384.17	gi|15920549|ref|NP_376218.1|	-	3e-75	253.5	0.0	3.7e-75	253.3	0.0	1.1	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase
Molydop_binding	PF01568.16	gi|15920549|ref|NP_376218.1|	-	3e-23	81.7	0.0	5.2e-23	80.9	0.0	1.4	1	0	0	1	1	1	1	Molydopterin	dinucleotide	binding	domain
Molybdop_Fe4S4	PF04879.11	gi|15920549|ref|NP_376218.1|	-	1.8e-15	56.5	0.5	3.4e-15	55.5	0.3	1.5	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase	Fe4S4	domain
DUF131	PF01998.12	gi|15920550|ref|NP_376219.1|	-	1.4e-11	43.6	13.0	1.8e-11	43.1	7.8	1.8	1	1	1	2	2	2	1	Protein	of	unknown	function	DUF131
DUF202	PF02656.10	gi|15920550|ref|NP_376219.1|	-	0.052	13.7	2.2	0.091	12.9	1.6	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF202)
MFS_2	PF13347.1	gi|15920550|ref|NP_376219.1|	-	0.1	10.9	4.1	0.13	10.6	2.9	1.4	1	1	0	1	1	1	0	MFS/sugar	transport	protein
Virul_fac_BrkB	PF03631.10	gi|15920550|ref|NP_376219.1|	-	0.23	10.7	8.6	0.29	10.4	5.9	1.0	1	0	0	1	1	1	0	Virulence	factor	BrkB
Dexa_ind	PF15198.1	gi|15920550|ref|NP_376219.1|	-	2.4	8.0	5.6	2.3	8.1	1.4	2.0	1	1	1	2	2	2	0	Dexamethasone-induced
DUF2721	PF11026.3	gi|15920550|ref|NP_376219.1|	-	3.4	7.3	6.9	2.1	7.9	3.5	1.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2721)
TFIIB	PF00382.14	gi|15920551|ref|NP_376220.1|	-	4.5e-38	128.9	4.5	5.4e-20	70.9	0.6	2.2	2	0	0	2	2	2	2	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.7	gi|15920551|ref|NP_376220.1|	-	5.6e-15	54.3	1.8	6e-15	54.2	0.3	1.7	2	0	0	2	2	2	1	TFIIB	zinc-binding
HTH_AsnC-type	PF13404.1	gi|15920551|ref|NP_376220.1|	-	2.2e-07	30.2	0.1	2.6e-05	23.6	0.1	2.7	2	0	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
Sigma70_r4	PF04545.11	gi|15920551|ref|NP_376220.1|	-	4.5e-05	22.6	3.5	0.00069	18.8	0.2	3.7	4	1	0	4	4	4	1	Sigma-70,	region	4
HTH_24	PF13412.1	gi|15920551|ref|NP_376220.1|	-	5.6e-05	22.4	0.6	0.00068	18.9	0.1	2.9	3	0	0	3	3	3	1	Winged	helix-turn-helix	DNA-binding
Cyclin_C	PF02984.14	gi|15920551|ref|NP_376220.1|	-	8.8e-05	22.4	0.0	0.06	13.2	0.0	2.2	2	0	0	2	2	2	2	Cyclin,	C-terminal	domain
Cyclin_N	PF00134.18	gi|15920551|ref|NP_376220.1|	-	0.00073	19.0	0.0	0.65	9.5	0.1	2.2	2	0	0	2	2	2	2	Cyclin,	N-terminal	domain
Sigma70_r4_2	PF08281.7	gi|15920551|ref|NP_376220.1|	-	0.0013	18.1	0.4	0.0074	15.7	0.0	2.5	3	0	0	3	3	3	1	Sigma-70,	region	4
HTH_11	PF08279.7	gi|15920551|ref|NP_376220.1|	-	0.0023	17.5	0.7	0.0049	16.4	0.2	1.8	2	0	0	2	2	2	1	HTH	domain
HTH_Tnp_ISL3	PF13542.1	gi|15920551|ref|NP_376220.1|	-	0.0034	16.5	0.3	0.15	11.2	0.0	2.7	2	0	0	2	2	2	1	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_23	PF13384.1	gi|15920551|ref|NP_376220.1|	-	0.0087	15.6	0.1	0.0087	15.6	0.1	3.3	4	0	0	4	4	4	1	Homeodomain-like	domain
HTH_37	PF13744.1	gi|15920551|ref|NP_376220.1|	-	0.028	14.1	1.0	0.13	12.1	0.2	2.4	2	0	0	2	2	2	0	Helix-turn-helix	domain
DUF3562	PF12085.3	gi|15920551|ref|NP_376220.1|	-	0.029	14.1	0.4	1	9.2	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3562)
HTH_Crp_2	PF13545.1	gi|15920551|ref|NP_376220.1|	-	0.081	12.7	3.3	0.52	10.1	0.1	3.1	4	0	0	4	4	4	0	Crp-like	helix-turn-helix	domain
HTH_38	PF13936.1	gi|15920551|ref|NP_376220.1|	-	1.1	8.8	6.0	0.86	9.2	0.1	3.8	4	0	0	4	4	4	0	Helix-turn-helix	domain
SUI1	PF01253.17	gi|15920552|ref|NP_376221.1|	-	4.4e-26	90.5	1.3	5.1e-26	90.3	0.9	1.1	1	0	0	1	1	1	1	Translation	initiation	factor	SUI1
Img2	PF05046.9	gi|15920552|ref|NP_376221.1|	-	0.038	14.1	0.8	0.064	13.4	0.5	1.5	1	1	0	1	1	1	0	Mitochondrial	large	subunit	ribosomal	protein	(Img2)
DNA_RNApol_7kD	PF03604.8	gi|161751101|ref|NP_376222.2|	-	2.3e-05	23.7	3.7	5.2e-05	22.6	2.5	1.6	1	1	0	1	1	1	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
DUF2072	PF09845.4	gi|161751101|ref|NP_376222.2|	-	0.0029	17.5	0.3	0.0031	17.4	0.2	1.0	1	0	0	1	1	1	1	Zn-ribbon	containing	protein	(DUF2072)
zinc_ribbon_5	PF13719.1	gi|161751101|ref|NP_376222.2|	-	0.0077	15.7	2.5	0.46	10.1	2.0	2.4	1	1	1	2	2	2	1	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.2	gi|161751101|ref|NP_376222.2|	-	0.012	15.3	2.8	0.037	13.8	0.0	2.0	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|161751101|ref|NP_376222.2|	-	0.013	15.1	2.5	0.68	9.6	2.0	2.5	1	1	1	2	2	2	0	zinc-ribbon	domain
zf-C2H2	PF00096.21	gi|161751101|ref|NP_376222.2|	-	0.014	15.7	1.5	3	8.3	0.1	2.1	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
Zn-ribbon_8	PF09723.5	gi|161751101|ref|NP_376222.2|	-	0.014	15.3	1.1	0.021	14.7	0.8	1.3	1	1	0	1	1	1	0	Zinc	ribbon	domain
Toxin_25	PF08095.6	gi|161751101|ref|NP_376222.2|	-	0.016	14.9	1.6	0.03	14.0	1.1	1.5	1	0	0	1	1	1	0	Hefutoxin	family
zf-BED	PF02892.10	gi|161751101|ref|NP_376222.2|	-	0.032	14.0	0.1	0.042	13.6	0.1	1.3	1	0	0	1	1	1	0	BED	zinc	finger
HypA	PF01155.14	gi|161751101|ref|NP_376222.2|	-	0.033	13.8	0.1	0.033	13.8	0.0	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
Zn_ribbon_recom	PF13408.1	gi|161751101|ref|NP_376222.2|	-	0.04	14.1	2.7	0.55	10.5	0.2	2.1	2	0	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
zf-ribbon_3	PF13248.1	gi|161751101|ref|NP_376222.2|	-	0.052	12.7	0.3	0.052	12.7	0.2	2.1	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-ISL3	PF14690.1	gi|161751101|ref|NP_376222.2|	-	0.056	13.4	0.5	0.056	13.4	0.4	2.1	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-Di19	PF05605.7	gi|161751101|ref|NP_376222.2|	-	0.06	13.4	0.4	3.1	7.9	0.1	2.1	2	0	0	2	2	2	0	Drought	induced	19	protein	(Di19),	zinc-binding
TF_Zn_Ribbon	PF08271.7	gi|161751101|ref|NP_376222.2|	-	0.083	12.2	0.5	3.4	7.0	0.1	2.1	2	0	0	2	2	2	0	TFIIB	zinc-binding
DZR	PF12773.2	gi|161751101|ref|NP_376222.2|	-	0.089	12.6	0.6	0.55	10.0	0.4	1.8	1	1	0	1	1	1	0	Double	zinc	ribbon
Cys_rich_CPXG	PF14255.1	gi|161751101|ref|NP_376222.2|	-	0.14	11.9	1.9	0.45	10.3	0.2	2.0	2	0	0	2	2	2	0	Cysteine-rich	CPXCG
zinc_ribbon_2	PF13240.1	gi|161751101|ref|NP_376222.2|	-	0.25	10.8	6.0	1.5	8.4	4.0	2.0	1	1	0	1	1	1	0	zinc-ribbon	domain
zf-H2C2_2	PF13465.1	gi|161751101|ref|NP_376222.2|	-	0.26	11.6	1.3	1.9	8.9	0.1	2.1	2	0	0	2	2	2	0	Zinc-finger	double	domain
Sgf11	PF08209.6	gi|161751101|ref|NP_376222.2|	-	0.29	10.4	1.5	8.6	5.7	0.0	2.1	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
Rubredoxin	PF00301.15	gi|161751101|ref|NP_376222.2|	-	0.33	10.8	6.7	16	5.4	1.0	2.1	1	1	1	2	2	2	0	Rubredoxin
zf-RING_5	PF14634.1	gi|161751101|ref|NP_376222.2|	-	0.43	10.3	2.2	2.1	8.1	0.0	2.0	1	1	1	2	2	2	0	zinc-RING	finger	domain
C1_2	PF03107.11	gi|161751101|ref|NP_376222.2|	-	0.53	10.4	2.9	1.2	9.3	2.0	1.6	1	1	0	1	1	1	0	C1	domain
DUF35_N	PF12172.3	gi|161751101|ref|NP_376222.2|	-	0.73	9.8	5.6	2.3	8.2	0.3	2.1	1	1	1	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-HIT	PF04438.11	gi|161751101|ref|NP_376222.2|	-	1.2	8.8	4.6	4.2	7.1	0.2	2.1	2	0	0	2	2	2	0	HIT	zinc	finger
UPF0547	PF10571.4	gi|161751101|ref|NP_376222.2|	-	7.7	6.3	6.4	0.68	9.6	0.9	1.8	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
Arginase	PF00491.16	gi|15920554|ref|NP_376223.1|	-	5.2e-70	235.8	0.1	6.2e-70	235.6	0.1	1.0	1	0	0	1	1	1	1	Arginase	family
APS_kinase	PF01583.15	gi|15920554|ref|NP_376223.1|	-	0.093	12.3	0.0	0.2	11.3	0.0	1.5	1	0	0	1	1	1	0	Adenylylsulphate	kinase
tRNA-synt_2b	PF00587.20	gi|15920555|ref|NP_376224.1|	-	1e-51	174.9	0.6	2e-51	174.0	0.1	1.8	2	0	0	2	2	2	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|15920555|ref|NP_376224.1|	-	2e-19	69.3	1.9	2.5e-19	68.9	0.1	2.1	2	1	0	2	2	2	1	Anticodon	binding	domain
Molydop_binding	PF01568.16	gi|15920556|ref|NP_376225.1|	-	5.7e-05	22.9	0.1	0.011	15.5	0.0	2.2	1	1	1	2	2	2	2	Molydopterin	dinucleotide	binding	domain
CDC48_N	PF02359.13	gi|15920556|ref|NP_376225.1|	-	0.06	13.2	0.1	0.1	12.5	0.0	1.6	1	1	0	1	1	1	0	Cell	division	protein	48	(CDC48),	N-terminal	domain
RRF_GI	PF12614.3	gi|15920557|ref|NP_376226.1|	-	0.0088	15.8	1.9	0.013	15.2	1.1	1.4	1	1	0	1	1	1	1	Ribosome	recycling	factor
DUF677	PF05055.7	gi|15920557|ref|NP_376226.1|	-	0.24	10.0	5.7	0.59	8.7	0.2	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF677)
Nnf1	PF03980.9	gi|15920557|ref|NP_376226.1|	-	0.6	10.1	4.9	0.13	12.2	0.5	2.0	2	1	0	2	2	2	0	Nnf1
PhoU_div	PF01865.11	gi|15920558|ref|NP_376227.1|	-	1.6e-06	27.4	5.4	1.6e-06	27.4	3.8	2.0	1	1	1	2	2	2	2	Protein	of	unknown	function	DUF47
PhoU	PF01895.14	gi|15920558|ref|NP_376227.1|	-	2.4e-06	27.8	11.9	3.7e-05	24.0	3.4	2.4	2	0	0	2	2	2	2	PhoU	domain
HrpJ	PF07201.6	gi|15920558|ref|NP_376227.1|	-	0.0082	16.1	2.3	0.071	13.1	0.0	2.2	2	0	0	2	2	2	1	HrpJ-like	domain
DUF327	PF03885.8	gi|15920558|ref|NP_376227.1|	-	1	9.1	11.1	0.22	11.3	0.5	2.9	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF327)
tRNA_int_endo	PF01974.12	gi|15920559|ref|NP_376228.1|	-	2.2e-27	94.6	0.0	3.7e-27	93.9	0.0	1.4	1	0	0	1	1	1	1	tRNA	intron	endonuclease,	catalytic	C-terminal	domain
tRNA_int_endo_N	PF02778.9	gi|15920559|ref|NP_376228.1|	-	4.2e-20	71.0	0.2	8.5e-20	70.0	0.2	1.5	2	0	0	2	2	2	1	tRNA	intron	endonuclease,	N-terminal	domain
DUF3116	PF11313.3	gi|15920559|ref|NP_376228.1|	-	0.073	12.6	0.2	9.2	5.9	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3116)
Fer4_18	PF13746.1	gi|15920560|ref|NP_376229.1|	-	0.035	14.5	3.5	0.5	10.8	2.4	2.1	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Flavoprotein	PF02441.14	gi|15920561|ref|NP_376230.1|	-	8.4e-27	93.3	0.1	1.2e-26	92.8	0.0	1.2	1	0	0	1	1	1	1	Flavoprotein
Thi4	PF01946.12	gi|15920562|ref|NP_376231.1|	-	8.7e-88	293.2	4.0	1e-87	293.0	2.8	1.1	1	0	0	1	1	1	1	Thi4	family
DAO	PF01266.19	gi|15920562|ref|NP_376231.1|	-	3.1e-15	55.9	3.5	4.3e-09	35.7	0.6	2.3	1	1	1	2	2	2	2	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|15920562|ref|NP_376231.1|	-	2.3e-11	43.1	7.2	1.3e-06	27.5	1.1	3.0	3	0	0	3	3	3	3	FAD	binding	domain
FAD_oxidored	PF12831.2	gi|15920562|ref|NP_376231.1|	-	2.2e-10	40.1	2.6	2.9e-10	39.8	1.8	1.1	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|15920562|ref|NP_376231.1|	-	5.4e-10	39.1	0.6	1.4e-09	37.8	0.3	1.8	2	0	0	2	2	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_3	PF13738.1	gi|15920562|ref|NP_376231.1|	-	4.2e-07	30.2	0.4	1.3e-06	28.5	0.3	1.8	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.9	gi|15920562|ref|NP_376231.1|	-	1.3e-06	28.4	3.0	2.1e-06	27.7	2.1	1.5	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|15920562|ref|NP_376231.1|	-	1.6e-06	27.4	0.0	2.4e-06	26.8	0.0	1.2	1	0	0	1	1	1	1	FAD	binding	domain
HI0933_like	PF03486.9	gi|15920562|ref|NP_376231.1|	-	9.3e-06	24.3	0.4	1.2e-05	23.9	0.3	1.3	1	0	0	1	1	1	1	HI0933-like	protein
GIDA	PF01134.17	gi|15920562|ref|NP_376231.1|	-	4.6e-05	22.4	0.9	9.2e-05	21.4	0.7	1.5	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
Pyr_redox	PF00070.22	gi|15920562|ref|NP_376231.1|	-	0.00024	21.4	0.9	0.0012	19.2	0.6	2.2	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.7	gi|15920562|ref|NP_376231.1|	-	0.003	16.5	0.2	0.015	14.2	0.2	1.9	1	1	0	1	1	1	1	Lycopene	cyclase	protein
Amino_oxidase	PF01593.19	gi|15920562|ref|NP_376231.1|	-	0.0038	16.3	0.1	0.0075	15.3	0.0	1.5	1	0	0	1	1	1	1	Flavin	containing	amine	oxidoreductase
ThiF	PF00899.16	gi|15920562|ref|NP_376231.1|	-	0.0068	16.2	0.4	0.019	14.7	0.0	1.9	2	0	0	2	2	2	1	ThiF	family
Shikimate_DH	PF01488.15	gi|15920562|ref|NP_376231.1|	-	0.01	15.9	0.0	0.034	14.2	0.0	1.9	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
Trp_halogenase	PF04820.9	gi|15920562|ref|NP_376231.1|	-	0.03	12.9	3.6	0.062	11.9	0.7	2.1	2	1	0	2	2	2	0	Tryptophan	halogenase
GMC_oxred_N	PF00732.14	gi|15920562|ref|NP_376231.1|	-	0.045	12.9	0.3	0.11	11.5	0.0	1.7	2	0	0	2	2	2	0	GMC	oxidoreductase
NAD_binding_9	PF13454.1	gi|15920562|ref|NP_376231.1|	-	0.13	12.0	1.8	0.2	11.3	0.3	2.0	2	0	0	2	2	2	0	FAD-NAD(P)-binding
Ribosomal_S24e	PF01282.14	gi|15920563|ref|NP_376232.1|	-	5e-17	61.4	0.1	7e-17	61.0	0.1	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S24e
IF-2	PF11987.3	gi|15920563|ref|NP_376232.1|	-	0.081	12.8	0.3	0.15	11.9	0.2	1.6	1	1	0	1	1	1	0	Translation-initiation	factor	2
Ribosomal_S27	PF01599.14	gi|15920564|ref|NP_376233.1|	-	1.2e-10	41.0	1.8	1.8e-10	40.4	1.2	1.3	1	0	0	1	1	1	1	Ribosomal	protein	S27a
Zn_Tnp_IS1595	PF12760.2	gi|15920564|ref|NP_376233.1|	-	0.00019	21.1	2.5	0.00026	20.7	1.7	1.2	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|15920564|ref|NP_376233.1|	-	0.00028	20.4	0.4	0.00029	20.4	0.3	1.2	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
RNA_POL_M_15KD	PF02150.11	gi|15920564|ref|NP_376233.1|	-	0.003	17.2	0.2	0.0058	16.2	0.1	1.5	1	0	0	1	1	1	1	RNA	polymerases	M/15	Kd	subunit
zf-ribbon_3	PF13248.1	gi|15920564|ref|NP_376233.1|	-	0.0052	15.9	1.2	0.3	10.3	0.0	2.2	2	0	0	2	2	2	1	zinc-ribbon	domain
DZR	PF12773.2	gi|15920564|ref|NP_376233.1|	-	0.0071	16.1	0.4	0.011	15.5	0.3	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
IBR	PF01485.16	gi|15920564|ref|NP_376233.1|	-	0.016	15.0	0.8	0.018	14.8	0.6	1.1	1	0	0	1	1	1	0	IBR	domain
GFA	PF04828.9	gi|15920564|ref|NP_376233.1|	-	0.017	15.0	1.6	2.4	8.1	0.1	2.1	1	1	1	2	2	2	0	Glutathione-dependent	formaldehyde-activating	enzyme
FAM72	PF14976.1	gi|15920564|ref|NP_376233.1|	-	0.02	14.7	0.8	0.028	14.2	0.6	1.3	1	1	0	1	1	1	0	FAM72	protein
DUF2387	PF09526.5	gi|15920564|ref|NP_376233.1|	-	0.021	14.7	0.6	0.043	13.7	0.4	1.5	1	0	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
zf-tcix	PF14952.1	gi|15920564|ref|NP_376233.1|	-	0.022	14.0	4.1	0.04	13.2	0.1	2.3	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
Ribosomal_L37e	PF01907.14	gi|15920564|ref|NP_376233.1|	-	0.053	13.3	1.3	0.09	12.5	0.9	1.4	1	0	0	1	1	1	0	Ribosomal	protein	L37e
DUF2082	PF09855.4	gi|15920564|ref|NP_376233.1|	-	0.063	13.1	3.2	0.36	10.6	0.2	2.2	1	1	1	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
zf-ISL3	PF14690.1	gi|15920564|ref|NP_376233.1|	-	0.12	12.4	5.5	0.46	10.5	0.4	2.2	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zinc_ribbon_2	PF13240.1	gi|15920564|ref|NP_376233.1|	-	0.13	11.7	4.2	0.76	9.3	0.1	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
Auto_anti-p27	PF06677.7	gi|15920564|ref|NP_376233.1|	-	0.14	11.9	2.0	0.33	10.7	0.2	2.0	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
Nudix_N_2	PF14803.1	gi|15920564|ref|NP_376233.1|	-	0.14	11.8	2.8	0.5	10.0	1.6	2.1	2	1	0	2	2	1	0	Nudix	N-terminal
TFIIS_C	PF01096.13	gi|15920564|ref|NP_376233.1|	-	0.17	11.5	1.8	4.4	7.0	0.2	2.4	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
PhnA_Zn_Ribbon	PF08274.7	gi|15920564|ref|NP_376233.1|	-	0.18	11.6	0.6	0.39	10.5	0.4	1.5	1	1	0	1	1	1	0	PhnA	Zinc-Ribbon
A2L_zn_ribbon	PF08792.5	gi|15920564|ref|NP_376233.1|	-	0.26	10.7	1.4	5.2	6.6	0.1	2.3	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
Rubredoxin	PF00301.15	gi|15920564|ref|NP_376233.1|	-	0.41	10.5	2.8	9.6	6.1	0.3	2.4	2	0	0	2	2	2	0	Rubredoxin
zf-TFIIB	PF13453.1	gi|15920564|ref|NP_376233.1|	-	0.96	8.6	3.5	2.5	7.3	2.4	1.7	1	1	0	1	1	1	0	Transcription	factor	zinc-finger
UPF0547	PF10571.4	gi|15920564|ref|NP_376233.1|	-	1.3	8.8	6.8	0.58	9.9	0.5	2.0	1	1	1	2	2	2	0	Uncharacterised	protein	family	UPF0547
zf-NADH-PPase	PF09297.6	gi|15920564|ref|NP_376233.1|	-	1.7	8.2	5.6	3.3	7.2	0.1	2.2	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
Zn-ribbon_8	PF09723.5	gi|15920564|ref|NP_376233.1|	-	2.8	7.9	5.5	2.2	8.3	0.4	2.2	1	1	1	2	2	2	0	Zinc	ribbon	domain
YhfH	PF14149.1	gi|15920564|ref|NP_376233.1|	-	6.6	6.6	8.8	43	4.0	5.7	2.1	1	1	1	2	2	2	0	YhfH-like	protein
Peptidase_M22	PF00814.20	gi|15920565|ref|NP_376234.1|	-	5.7e-78	262.1	0.0	7e-78	261.8	0.0	1.0	1	0	0	1	1	1	1	Glycoprotease	family
CheX	PF13690.1	gi|15920565|ref|NP_376234.1|	-	0.12	12.2	0.0	0.53	10.1	0.0	2.1	2	1	0	2	2	2	0	Chemotaxis	phosphatase	CheX
RIO1	PF01163.17	gi|15920566|ref|NP_376235.1|	-	3.8e-09	36.1	0.1	1.2e-08	34.5	0.0	1.7	1	1	1	2	2	2	1	RIO1	family
Pkinase	PF00069.20	gi|15920566|ref|NP_376235.1|	-	5.8e-09	35.4	0.1	7.6e-09	35.0	0.1	1.1	1	0	0	1	1	1	1	Protein	kinase	domain
APH	PF01636.18	gi|15920566|ref|NP_376235.1|	-	3.2e-07	30.3	0.0	5.8e-06	26.2	0.0	2.0	1	1	1	2	2	2	2	Phosphotransferase	enzyme	family
Kdo	PF06293.9	gi|15920566|ref|NP_376235.1|	-	8.8e-07	28.1	0.0	1.5e-06	27.4	0.0	1.4	1	1	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
Pkinase_Tyr	PF07714.12	gi|15920566|ref|NP_376235.1|	-	0.00013	21.1	0.0	0.00016	20.8	0.0	1.2	1	0	0	1	1	1	1	Protein	tyrosine	kinase
EcKinase	PF02958.15	gi|15920566|ref|NP_376235.1|	-	0.00051	19.2	0.1	0.00084	18.5	0.0	1.4	2	0	0	2	2	2	1	Ecdysteroid	kinase
Choline_kinase	PF01633.15	gi|15920566|ref|NP_376235.1|	-	0.0025	17.4	0.1	0.0044	16.6	0.1	1.4	1	0	0	1	1	1	1	Choline/ethanolamine	kinase
Ham1p_like	PF01725.11	gi|15920567|ref|NP_376236.1|	-	1.2e-50	171.5	0.0	1.3e-50	171.3	0.0	1.0	1	0	0	1	1	1	1	Ham1	family
Aldo_ket_red	PF00248.16	gi|15920568|ref|NP_376237.1|	-	2e-50	171.2	0.0	3.6e-50	170.3	0.0	1.4	1	1	0	1	1	1	1	Aldo/keto	reductase	family
WYL	PF13280.1	gi|15920569|ref|NP_376238.1|	-	0.17	11.7	1.5	0.16	11.7	1.0	1.2	1	0	0	1	1	1	0	WYL	domain
YpM	PF09144.5	gi|15920570|ref|NP_376239.1|	-	0.091	12.7	0.3	0.17	11.8	0.2	1.4	1	0	0	1	1	1	0	Yersinia	pseudotuberculosis	mitogen
OmpH	PF03938.9	gi|15920571|ref|NP_376240.1|	-	0.00019	21.4	4.3	0.00022	21.2	3.0	1.0	1	0	0	1	1	1	1	Outer	membrane	protein	(OmpH-like)
Apolipoprotein	PF01442.13	gi|15920571|ref|NP_376240.1|	-	0.0017	17.8	0.7	0.0027	17.2	0.5	1.4	1	1	0	1	1	1	1	Apolipoprotein	A1/A4/E	domain
Spore_III_AB	PF09548.5	gi|15920571|ref|NP_376240.1|	-	0.01	15.6	3.6	0.012	15.3	2.5	1.2	1	0	0	1	1	1	0	Stage	III	sporulation	protein	AB	(spore_III_AB)
ArgJ	PF01960.13	gi|15920571|ref|NP_376240.1|	-	0.016	13.6	0.4	0.024	13.0	0.3	1.2	1	0	0	1	1	1	0	ArgJ	family
Fimbrial_K88	PF02432.10	gi|15920571|ref|NP_376240.1|	-	0.016	14.6	0.0	0.018	14.4	0.0	1.0	1	0	0	1	1	1	0	Fimbrial,	major	and	minor	subunit
V-ATPase_G	PF03179.10	gi|15920571|ref|NP_376240.1|	-	0.046	14.0	8.6	0.12	12.7	4.8	2.3	1	1	0	1	1	1	0	Vacuolar	(H+)-ATPase	G	subunit
Mitofilin	PF09731.4	gi|15920571|ref|NP_376240.1|	-	0.1	11.2	9.2	0.12	11.0	6.4	1.0	1	0	0	1	1	1	0	Mitochondrial	inner	membrane	protein
DUF883	PF05957.8	gi|15920571|ref|NP_376240.1|	-	0.24	11.8	1.0	0.55	10.6	0.4	1.7	1	1	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF883)
FadA	PF09403.5	gi|15920571|ref|NP_376240.1|	-	0.32	11.0	0.1	0.32	11.0	0.1	2.2	1	1	1	2	2	2	0	Adhesion	protein	FadA
Z1	PF10593.4	gi|15920571|ref|NP_376240.1|	-	0.34	10.0	4.4	0.47	9.6	3.0	1.3	1	1	0	1	1	1	0	Z1	domain
BMFP	PF04380.8	gi|15920571|ref|NP_376240.1|	-	0.38	10.9	2.6	8.8	6.5	0.4	2.3	1	1	1	2	2	2	0	Membrane	fusogenic	activity
ISG65-75	PF11727.3	gi|15920571|ref|NP_376240.1|	-	0.4	9.6	6.0	0.47	9.4	4.2	1.1	1	0	0	1	1	1	0	Invariant	surface	glycoprotein
DUF573	PF04504.9	gi|15920571|ref|NP_376240.1|	-	0.53	10.5	5.8	0.69	10.2	3.8	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function,	DUF573
SBP_bac_7	PF03480.8	gi|15920571|ref|NP_376240.1|	-	0.69	8.9	5.6	0.65	9.0	2.6	1.7	1	1	1	2	2	2	0	Bacterial	extracellular	solute-binding	protein,	family	7
YvrJ	PF12841.2	gi|15920571|ref|NP_376240.1|	-	0.83	8.9	2.9	2.6	7.3	0.1	2.7	3	0	0	3	3	3	0	YvrJ	protein	family
Carbpep_Y_N	PF05388.6	gi|15920571|ref|NP_376240.1|	-	0.85	9.7	3.8	3.3	7.9	2.6	1.9	1	1	0	1	1	1	0	Carboxypeptidase	Y	pro-peptide
PaaSYMP	PF14738.1	gi|15920571|ref|NP_376240.1|	-	1.5	8.5	5.7	0.91	9.2	2.9	1.4	2	0	0	2	2	2	0	Solute	carrier	(proton/amino	acid	symporter),	TRAMD3	or	PAT1
DUF4163	PF13739.1	gi|15920571|ref|NP_376240.1|	-	1.7	9.4	8.7	0.99	10.2	4.3	1.7	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4163)
DUF1948	PF09185.5	gi|15920571|ref|NP_376240.1|	-	2.5	7.7	6.2	2.2	7.9	3.4	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1948)
GCD14	PF08704.5	gi|15920572|ref|NP_376241.1|	-	2.7e-33	115.5	0.0	3.7e-33	115.0	0.0	1.1	1	0	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
PCMT	PF01135.14	gi|15920572|ref|NP_376241.1|	-	2.1e-13	50.2	0.0	2.6e-13	49.9	0.0	1.1	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_31	PF13847.1	gi|15920572|ref|NP_376241.1|	-	4.6e-13	49.0	0.0	6.3e-13	48.5	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|15920572|ref|NP_376241.1|	-	3.3e-10	40.5	0.0	5.3e-10	39.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|15920572|ref|NP_376241.1|	-	6.2e-08	32.0	0.0	9.6e-08	31.4	0.0	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_26	PF13659.1	gi|15920572|ref|NP_376241.1|	-	1.5e-07	31.4	0.0	4.3e-07	29.9	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_3	PF01596.12	gi|15920572|ref|NP_376241.1|	-	4.6e-06	25.8	0.0	6.5e-06	25.3	0.0	1.2	1	0	0	1	1	1	1	O-methyltransferase
MTS	PF05175.9	gi|15920572|ref|NP_376241.1|	-	6.2e-06	25.6	0.0	1.3e-05	24.5	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	small	domain
RrnaAD	PF00398.15	gi|15920572|ref|NP_376241.1|	-	8.7e-06	24.9	0.0	1.2e-05	24.4	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_24	PF13578.1	gi|15920572|ref|NP_376241.1|	-	9.4e-06	26.4	0.0	1.7e-05	25.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|15920572|ref|NP_376241.1|	-	1.2e-05	25.6	0.0	2.1e-05	24.9	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|15920572|ref|NP_376241.1|	-	3e-05	23.3	0.0	3.9e-05	22.9	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Gcd10p	PF04189.8	gi|15920572|ref|NP_376241.1|	-	4.3e-05	22.7	0.1	0.018	14.1	0.0	2.1	1	1	1	2	2	2	2	Gcd10p	family
Methyltransf_25	PF13649.1	gi|15920572|ref|NP_376241.1|	-	7e-05	23.1	0.0	0.00011	22.4	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|15920572|ref|NP_376241.1|	-	7.1e-05	22.5	0.0	0.00015	21.5	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_4	PF02390.12	gi|15920572|ref|NP_376241.1|	-	0.00019	20.5	0.0	0.00034	19.7	0.0	1.4	1	0	0	1	1	1	1	Putative	methyltransferase
Methyltransf_16	PF10294.4	gi|15920572|ref|NP_376241.1|	-	0.00027	20.4	0.0	0.00041	19.8	0.0	1.2	1	0	0	1	1	1	1	Putative	methyltransferase
UPF0020	PF01170.13	gi|15920572|ref|NP_376241.1|	-	0.00032	20.3	0.0	0.0005	19.6	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_32	PF13679.1	gi|15920572|ref|NP_376241.1|	-	0.0018	17.9	0.0	0.0026	17.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.15	gi|15920572|ref|NP_376241.1|	-	0.0039	16.3	0.0	0.0055	15.8	0.0	1.3	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_15	PF09445.5	gi|15920572|ref|NP_376241.1|	-	0.0085	15.6	0.1	0.023	14.2	0.0	1.6	1	1	1	2	2	2	1	RNA	cap	guanine-N2	methyltransferase
Met_10	PF02475.11	gi|15920572|ref|NP_376241.1|	-	0.015	14.9	0.0	0.026	14.1	0.0	1.3	1	0	0	1	1	1	0	Met-10+	like-protein
Methyltransf_12	PF08242.7	gi|15920572|ref|NP_376241.1|	-	0.015	15.7	0.0	0.039	14.4	0.0	1.7	1	1	0	1	1	1	0	Methyltransferase	domain
CmcI	PF04989.7	gi|15920572|ref|NP_376241.1|	-	0.076	12.3	0.0	0.089	12.0	0.0	1.3	1	1	0	1	1	1	0	Cephalosporin	hydroxylase
TRM	PF02005.11	gi|15920572|ref|NP_376241.1|	-	0.086	11.7	0.0	0.093	11.6	0.0	1.1	1	0	0	1	1	1	0	N2,N2-dimethylguanosine	tRNA	methyltransferase
TrmB	PF01978.14	gi|15920573|ref|NP_376242.1|	-	1.8e-18	66.0	0.1	1.2e-17	63.3	0.0	2.2	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|15920573|ref|NP_376242.1|	-	3.7e-06	26.2	0.3	1.2e-05	24.5	0.2	2.0	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.17	gi|15920573|ref|NP_376242.1|	-	6.2e-06	25.8	0.1	1.8e-05	24.3	0.0	1.8	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.1	gi|15920573|ref|NP_376242.1|	-	0.00067	19.9	0.0	0.002	18.4	0.0	1.8	2	0	0	2	2	1	1	Winged	helix	DNA-binding	domain
HTH_11	PF08279.7	gi|15920573|ref|NP_376242.1|	-	0.0018	17.9	0.1	0.006	16.1	0.1	2.0	1	1	0	1	1	1	1	HTH	domain
PadR	PF03551.9	gi|15920573|ref|NP_376242.1|	-	0.0035	17.0	0.0	0.0094	15.6	0.0	1.7	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
Cytokin_check_N	PF10407.4	gi|15920573|ref|NP_376242.1|	-	0.0044	16.5	0.1	0.022	14.3	0.1	2.2	1	0	0	1	1	1	1	Cdc14	phosphatase	binding	protein	N-terminus
Mga	PF05043.8	gi|15920573|ref|NP_376242.1|	-	0.012	15.9	0.6	0.034	14.4	0.0	2.0	2	0	0	2	2	2	0	Mga	helix-turn-helix	domain
FeoC	PF09012.5	gi|15920573|ref|NP_376242.1|	-	0.028	14.1	0.0	0.081	12.6	0.0	1.8	1	1	0	1	1	1	0	FeoC	like	transcriptional	regulator
Rrf2	PF02082.15	gi|15920573|ref|NP_376242.1|	-	0.028	14.5	0.1	0.15	12.2	0.0	2.2	2	1	0	2	2	2	0	Transcriptional	regulator
HTH_34	PF13601.1	gi|15920573|ref|NP_376242.1|	-	0.03	14.3	0.0	0.079	12.9	0.0	1.7	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|15920573|ref|NP_376242.1|	-	0.033	13.8	0.0	0.13	11.9	0.0	1.9	2	1	0	2	2	2	0	MarR	family
HTH_CodY	PF08222.6	gi|15920573|ref|NP_376242.1|	-	0.04	13.2	0.1	0.33	10.3	0.0	2.5	3	0	0	3	3	3	0	CodY	helix-turn-helix	domain
HTH_7	PF02796.10	gi|15920573|ref|NP_376242.1|	-	0.043	13.6	0.2	9	6.2	0.0	2.9	2	1	1	3	3	3	0	Helix-turn-helix	domain	of	resolvase
TFIIE_alpha	PF02002.12	gi|15920573|ref|NP_376242.1|	-	0.048	13.1	0.3	0.22	11.0	0.2	2.2	1	1	0	1	1	1	0	TFIIE	alpha	subunit
HTH_10	PF04967.7	gi|15920573|ref|NP_376242.1|	-	0.048	13.2	0.3	3.3	7.3	0.0	3.0	3	0	0	3	3	3	0	HTH	DNA	binding	domain
HTH_IclR	PF09339.5	gi|15920573|ref|NP_376242.1|	-	0.051	13.1	0.0	0.25	10.9	0.0	1.9	2	0	0	2	2	2	0	IclR	helix-turn-helix	domain
HTH_Crp_2	PF13545.1	gi|15920573|ref|NP_376242.1|	-	0.06	13.1	0.0	1.2	9.0	0.0	2.7	3	0	0	3	3	3	0	Crp-like	helix-turn-helix	domain
Ribosomal_S25	PF03297.10	gi|15920574|ref|NP_376243.1|	-	6e-12	45.5	9.9	6.9e-12	45.3	6.9	1.0	1	0	0	1	1	1	1	S25	ribosomal	protein
EAP30	PF04157.11	gi|15920574|ref|NP_376243.1|	-	0.0015	17.7	0.5	0.0015	17.7	0.3	2.0	1	1	1	2	2	2	1	EAP30/Vps36	family
HTH_24	PF13412.1	gi|15920574|ref|NP_376243.1|	-	0.002	17.4	1.1	0.2	11.0	0.1	2.4	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|15920574|ref|NP_376243.1|	-	0.0027	17.3	0.4	0.0067	16.0	0.3	1.7	1	0	0	1	1	1	1	HTH	domain
TrmB	PF01978.14	gi|15920574|ref|NP_376243.1|	-	0.0039	16.8	2.0	0.0044	16.7	0.3	1.9	2	1	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
Fe_dep_repress	PF01325.14	gi|15920574|ref|NP_376243.1|	-	0.0057	16.5	0.4	0.0057	16.5	0.3	2.1	2	0	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Rrf2	PF02082.15	gi|15920574|ref|NP_376243.1|	-	0.025	14.6	2.7	0.14	12.2	0.2	2.3	1	1	1	2	2	2	0	Transcriptional	regulator
Dynamitin	PF04912.9	gi|15920574|ref|NP_376243.1|	-	0.037	12.8	6.0	0.043	12.6	4.2	1.0	1	0	0	1	1	1	0	Dynamitin
FeoC	PF09012.5	gi|15920574|ref|NP_376243.1|	-	0.041	13.5	0.1	0.075	12.7	0.0	1.4	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
Ftsk_gamma	PF09397.5	gi|15920574|ref|NP_376243.1|	-	0.053	13.2	0.1	0.36	10.5	0.0	2.1	1	1	1	2	2	2	0	Ftsk	gamma	domain
Galactosyl_T	PF01762.16	gi|15920574|ref|NP_376243.1|	-	0.071	12.7	0.4	0.09	12.3	0.3	1.1	1	0	0	1	1	1	0	Galactosyltransferase
Peptidase_C15	PF01470.12	gi|15920574|ref|NP_376243.1|	-	0.077	12.8	0.4	0.1	12.3	0.2	1.3	1	1	0	1	1	1	0	Pyroglutamyl	peptidase
MarR_2	PF12802.2	gi|15920574|ref|NP_376243.1|	-	0.087	12.5	0.2	0.18	11.5	0.0	1.6	2	0	0	2	2	1	0	MarR	family
IF2_N	PF04760.10	gi|15920574|ref|NP_376243.1|	-	0.092	12.4	2.4	2.5	7.8	0.3	2.6	2	1	0	2	2	2	0	Translation	initiation	factor	IF-2,	N-terminal	region
YWFCY	PF14293.1	gi|15920574|ref|NP_376243.1|	-	0.14	12.0	0.0	0.25	11.2	0.0	1.3	1	0	0	1	1	1	0	YWFCY	protein
HTH_Crp_2	PF13545.1	gi|15920574|ref|NP_376243.1|	-	0.18	11.5	0.8	1.6	8.5	0.0	2.2	1	1	2	3	3	3	0	Crp-like	helix-turn-helix	domain
Guanylate_kin	PF00625.16	gi|15920574|ref|NP_376243.1|	-	0.28	10.6	6.3	0.16	11.4	2.9	1.5	2	0	0	2	2	2	0	Guanylate	kinase
DUF4570	PF15134.1	gi|15920574|ref|NP_376243.1|	-	0.29	11.0	4.7	0.38	10.6	3.3	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4570)
DUF1104	PF06518.6	gi|15920574|ref|NP_376243.1|	-	0.35	11.0	7.0	0.64	10.1	4.9	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1104)
HK97-gp10_like	PF04883.7	gi|15920574|ref|NP_376243.1|	-	3.6	8.5	8.4	11	6.9	5.8	1.9	1	1	0	1	1	1	0	Bacteriophage	HK97-gp10,	putative	tail-component
DUF4473	PF14747.1	gi|15920574|ref|NP_376243.1|	-	9.6	6.5	10.1	6.3	7.0	2.0	2.8	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4473)
CN_hydrolase	PF00795.17	gi|15920575|ref|NP_376244.1|	-	2e-11	43.5	0.0	4.9e-11	42.3	0.0	1.5	1	1	0	1	1	1	1	Carbon-nitrogen	hydrolase
DUF3671	PF12420.3	gi|15920575|ref|NP_376244.1|	-	0.01	15.8	1.0	0.024	14.5	0.7	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function
Topoisom_bac	PF01131.15	gi|15920576|ref|NP_376245.1|	-	2.2e-90	303.3	6.5	4.7e-90	302.3	4.5	1.6	1	0	0	1	1	1	1	DNA	topoisomerase
Toprim	PF01751.17	gi|15920576|ref|NP_376245.1|	-	4.7e-24	84.2	0.6	1.8e-23	82.4	0.0	2.4	2	0	0	2	2	2	1	Toprim	domain
Helicase_C	PF00271.26	gi|15920576|ref|NP_376245.1|	-	0.00051	19.8	1.7	0.69	9.8	0.0	4.4	4	0	0	4	4	4	1	Helicase	conserved	C-terminal	domain
Toprim_4	PF13662.1	gi|15920576|ref|NP_376245.1|	-	0.079	12.9	0.0	0.19	11.7	0.0	1.7	1	0	0	1	1	1	0	Toprim	domain
AAA	PF00004.24	gi|15920578|ref|NP_376247.1|	-	1.6e-98	326.0	0.0	3.1e-48	163.3	0.0	2.7	3	0	0	3	3	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
CDC48_N	PF02359.13	gi|15920578|ref|NP_376247.1|	-	1.6e-23	82.4	0.2	5.1e-23	80.8	0.1	1.9	1	0	0	1	1	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
RuvB_N	PF05496.7	gi|15920578|ref|NP_376247.1|	-	2.3e-16	59.5	0.0	2.2e-08	33.4	0.0	2.6	2	1	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
CDC48_2	PF02933.12	gi|15920578|ref|NP_376247.1|	-	2.7e-16	58.9	0.9	6.7e-16	57.6	0.0	2.1	2	0	0	2	2	1	1	Cell	division	protein	48	(CDC48),	domain	2
AAA_2	PF07724.9	gi|15920578|ref|NP_376247.1|	-	5.7e-15	55.6	0.0	4.2e-07	30.0	0.0	2.6	2	0	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
AAA_16	PF13191.1	gi|15920578|ref|NP_376247.1|	-	1.7e-13	50.9	0.1	3.4e-06	27.1	0.0	3.4	2	1	1	3	3	3	2	AAA	ATPase	domain
AAA_22	PF13401.1	gi|15920578|ref|NP_376247.1|	-	2.7e-13	50.1	0.2	5.8e-05	23.2	0.0	4.3	2	2	0	2	2	2	2	AAA	domain
AAA_5	PF07728.9	gi|15920578|ref|NP_376247.1|	-	2.5e-12	46.6	0.4	8.4e-05	22.3	0.0	4.1	2	2	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
TIP49	PF06068.8	gi|15920578|ref|NP_376247.1|	-	7.3e-12	44.6	0.0	4.4e-05	22.3	0.0	3.2	3	0	0	3	3	3	2	TIP49	C-terminus
AAA_17	PF13207.1	gi|15920578|ref|NP_376247.1|	-	3.2e-11	44.0	0.8	0.00012	22.9	0.0	3.4	2	2	0	2	2	2	2	AAA	domain
AAA_14	PF13173.1	gi|15920578|ref|NP_376247.1|	-	3.7e-11	43.0	0.0	9.9e-05	22.2	0.0	2.8	2	0	0	2	2	2	2	AAA	domain
AAA_33	PF13671.1	gi|15920578|ref|NP_376247.1|	-	4.1e-11	42.9	0.0	0.00043	20.1	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
Vps4_C	PF09336.5	gi|15920578|ref|NP_376247.1|	-	1.6e-09	37.5	0.6	7e-05	22.6	0.0	2.9	2	0	0	2	2	2	2	Vps4	C	terminal	oligomerisation	domain
Zeta_toxin	PF06414.7	gi|15920578|ref|NP_376247.1|	-	1.8e-09	37.0	0.0	0.00083	18.5	0.0	2.4	2	0	0	2	2	2	2	Zeta	toxin
IstB_IS21	PF01695.12	gi|15920578|ref|NP_376247.1|	-	2.7e-09	36.6	0.0	0.00097	18.5	0.0	2.4	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
AAA_28	PF13521.1	gi|15920578|ref|NP_376247.1|	-	5.5e-08	32.9	0.0	0.014	15.3	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
Arch_ATPase	PF01637.13	gi|15920578|ref|NP_376247.1|	-	2e-07	30.9	0.5	0.002	17.8	0.0	4.0	3	1	1	5	5	4	1	Archaeal	ATPase
RNA_helicase	PF00910.17	gi|15920578|ref|NP_376247.1|	-	2.2e-07	30.9	0.0	0.0063	16.6	0.0	2.9	2	0	0	2	2	2	2	RNA	helicase
Mg_chelatase	PF01078.16	gi|15920578|ref|NP_376247.1|	-	2.5e-07	30.0	1.1	0.0068	15.5	0.1	2.6	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_18	PF13238.1	gi|15920578|ref|NP_376247.1|	-	2.8e-07	30.9	1.1	0.056	13.7	0.0	3.6	3	0	0	3	3	3	2	AAA	domain
AAA_25	PF13481.1	gi|15920578|ref|NP_376247.1|	-	9.8e-07	28.3	3.2	0.036	13.4	0.2	3.9	2	2	1	3	3	3	1	AAA	domain
NACHT	PF05729.7	gi|15920578|ref|NP_376247.1|	-	1.4e-06	28.0	0.4	0.42	10.2	0.0	4.1	4	0	0	4	4	4	2	NACHT	domain
AAA_19	PF13245.1	gi|15920578|ref|NP_376247.1|	-	4.8e-06	26.2	2.4	0.064	13.0	0.4	3.0	2	0	0	2	2	2	2	Part	of	AAA	domain
Sigma54_activ_2	PF14532.1	gi|15920578|ref|NP_376247.1|	-	6.4e-06	26.2	0.0	0.1	12.6	0.0	2.5	2	0	0	2	2	2	2	Sigma-54	interaction	domain
ABC_tran	PF00005.22	gi|15920578|ref|NP_376247.1|	-	1.3e-05	25.4	0.0	0.74	10.1	0.0	3.5	3	0	0	3	3	3	2	ABC	transporter
AAA_3	PF07726.6	gi|15920578|ref|NP_376247.1|	-	1.3e-05	24.7	0.0	0.15	11.6	0.0	2.8	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_24	PF13479.1	gi|15920578|ref|NP_376247.1|	-	1.6e-05	24.6	0.1	0.19	11.2	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
Sigma54_activat	PF00158.21	gi|15920578|ref|NP_376247.1|	-	3.9e-05	23.1	0.3	0.52	9.7	0.0	4.0	2	2	0	2	2	2	2	Sigma-54	interaction	domain
Bac_DnaA	PF00308.13	gi|15920578|ref|NP_376247.1|	-	7.7e-05	22.4	0.0	0.074	12.6	0.0	3.4	3	1	0	3	3	3	1	Bacterial	dnaA	protein
DUF815	PF05673.8	gi|15920578|ref|NP_376247.1|	-	0.0001	21.3	0.0	0.081	11.8	0.0	2.5	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
UPF0079	PF02367.12	gi|15920578|ref|NP_376247.1|	-	0.00012	21.6	0.0	0.32	10.6	0.0	2.7	2	0	0	2	2	2	2	Uncharacterised	P-loop	hydrolase	UPF0079
KaiC	PF06745.8	gi|15920578|ref|NP_376247.1|	-	0.00015	20.9	3.8	0.12	11.5	0.0	4.2	4	1	0	5	5	4	1	KaiC
Molydop_binding	PF01568.16	gi|15920578|ref|NP_376247.1|	-	0.00027	20.7	0.0	0.00071	19.3	0.0	1.7	1	0	0	1	1	1	1	Molydopterin	dinucleotide	binding	domain
Parvo_NS1	PF01057.12	gi|15920578|ref|NP_376247.1|	-	0.00035	19.5	0.1	0.76	8.5	0.0	2.4	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
PhoH	PF02562.11	gi|15920578|ref|NP_376247.1|	-	0.00056	19.1	0.5	0.25	10.5	0.1	2.7	2	0	0	2	2	2	1	PhoH-like	protein
SKI	PF01202.17	gi|15920578|ref|NP_376247.1|	-	0.00085	19.2	0.0	1.2	9.0	0.0	2.8	2	0	0	2	2	2	1	Shikimate	kinase
AFG1_ATPase	PF03969.11	gi|15920578|ref|NP_376247.1|	-	0.0012	17.7	0.0	0.31	9.7	0.0	2.7	2	1	0	2	2	2	1	AFG1-like	ATPase
Guanylate_kin	PF00625.16	gi|15920578|ref|NP_376247.1|	-	0.0022	17.4	2.6	12	5.3	0.0	4.6	4	1	1	5	5	5	0	Guanylate	kinase
Cytidylate_kin2	PF13189.1	gi|15920578|ref|NP_376247.1|	-	0.0035	17.2	0.0	0.83	9.5	0.0	2.6	2	0	0	2	2	2	1	Cytidylate	kinase-like	family
AAA_11	PF13086.1	gi|15920578|ref|NP_376247.1|	-	0.0042	16.7	0.1	1.9	8.0	0.0	2.7	2	1	0	2	2	2	1	AAA	domain
AAA_10	PF12846.2	gi|15920578|ref|NP_376247.1|	-	0.0044	16.4	3.0	2	7.7	0.2	3.6	1	1	1	2	2	2	1	AAA-like	domain
T2SE	PF00437.15	gi|15920578|ref|NP_376247.1|	-	0.0071	15.2	0.0	2.9	6.7	0.0	2.6	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
ATP-synt_ab	PF00006.20	gi|15920578|ref|NP_376247.1|	-	0.0078	15.7	0.1	0.55	9.6	0.0	2.4	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
DUF2075	PF09848.4	gi|15920578|ref|NP_376247.1|	-	0.0084	15.1	0.0	2	7.2	0.0	2.6	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
NTPase_1	PF03266.10	gi|15920578|ref|NP_376247.1|	-	0.011	15.4	5.1	9.3	5.9	0.0	4.5	4	2	1	6	6	4	0	NTPase
NB-ARC	PF00931.17	gi|15920578|ref|NP_376247.1|	-	0.012	14.5	0.0	4.4	6.0	0.0	2.5	2	0	0	2	2	2	0	NB-ARC	domain
IPT	PF01745.11	gi|15920578|ref|NP_376247.1|	-	0.014	14.5	0.1	1.2	8.2	0.1	2.3	2	0	0	2	2	2	0	Isopentenyl	transferase
KTI12	PF08433.5	gi|15920578|ref|NP_376247.1|	-	0.03	13.5	0.0	12	4.9	0.0	3.0	3	0	0	3	3	2	0	Chromatin	associated	protein	KTI12
PduV-EutP	PF10662.4	gi|15920578|ref|NP_376247.1|	-	0.042	13.3	0.2	11	5.4	0.0	3.1	3	0	0	3	3	3	0	Ethanolamine	utilisation	-	propanediol	utilisation
ResIII	PF04851.10	gi|15920578|ref|NP_376247.1|	-	0.043	13.6	0.0	1.6	8.5	0.0	2.6	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
AAA_29	PF13555.1	gi|15920578|ref|NP_376247.1|	-	0.05	13.1	0.0	9.7	5.8	0.0	2.8	3	0	0	3	3	2	0	P-loop	containing	region	of	AAA	domain
Viral_helicase1	PF01443.13	gi|15920578|ref|NP_376247.1|	-	0.051	13.0	0.0	0.62	9.5	0.0	2.2	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
KAP_NTPase	PF07693.9	gi|15920578|ref|NP_376247.1|	-	0.079	11.9	0.0	2.2	7.2	0.0	2.7	3	0	0	3	3	3	0	KAP	family	P-loop	domain
CPT	PF07931.7	gi|15920578|ref|NP_376247.1|	-	0.15	11.6	0.0	14	5.2	0.0	2.9	2	1	1	3	3	3	0	Chloramphenicol	phosphotransferase-like	protein
AAA_23	PF13476.1	gi|15920578|ref|NP_376247.1|	-	1	9.6	4.1	11	6.2	0.1	3.4	1	1	1	2	2	2	0	AAA	domain
PhosphMutase	PF10143.4	gi|15920579|ref|NP_376248.1|	-	3.7e-62	208.9	0.0	5.8e-62	208.3	0.0	1.3	1	0	0	1	1	1	1	2,3-bisphosphoglycerate-independent	phosphoglycerate	mutase
Metalloenzyme	PF01676.13	gi|15920579|ref|NP_376248.1|	-	1.2e-44	152.6	0.0	1.4e-44	152.3	0.0	1.1	1	0	0	1	1	1	1	Metalloenzyme	superfamily
Phosphodiest	PF01663.17	gi|15920579|ref|NP_376248.1|	-	0.00031	20.1	0.2	0.0014	18.0	0.1	1.9	2	0	0	2	2	2	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
TPP_enzyme_M	PF00205.17	gi|15920579|ref|NP_376248.1|	-	0.046	13.4	0.1	0.15	11.8	0.0	1.9	2	0	0	2	2	2	0	Thiamine	pyrophosphate	enzyme,	central	domain
DUF359	PF04019.7	gi|15920580|ref|NP_376249.1|	-	5.3e-39	132.3	2.8	6.9e-39	131.9	2.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF359)
DUF2113	PF09886.4	gi|15920580|ref|NP_376249.1|	-	0.087	11.9	2.9	0.55	9.3	2.0	2.0	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2113)
Spt4	PF06093.8	gi|15920581|ref|NP_376250.1|	-	2.9e-14	52.7	0.1	3.6e-14	52.3	0.0	1.1	1	0	0	1	1	1	1	Spt4/RpoE2	zinc	finger
zf-ribbon_3	PF13248.1	gi|15920581|ref|NP_376250.1|	-	0.00036	19.6	3.5	0.00053	19.1	2.5	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|15920581|ref|NP_376250.1|	-	0.00077	19.2	1.0	0.00098	18.8	0.7	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
UPF0547	PF10571.4	gi|15920581|ref|NP_376250.1|	-	0.0018	17.8	5.6	0.0028	17.2	3.9	1.3	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
zinc_ribbon_2	PF13240.1	gi|15920581|ref|NP_376250.1|	-	0.016	14.6	2.8	0.027	13.9	1.9	1.3	1	0	0	1	1	1	0	zinc-ribbon	domain
zf-C4H2	PF10146.4	gi|15920581|ref|NP_376250.1|	-	0.019	14.9	1.4	0.021	14.8	1.0	1.1	1	0	0	1	1	1	0	Zinc	finger-containing	protein
TF_Zn_Ribbon	PF08271.7	gi|15920581|ref|NP_376250.1|	-	0.035	13.4	0.2	0.52	9.6	0.0	2.2	2	0	0	2	2	2	0	TFIIB	zinc-binding
zf-C3HC4_3	PF13920.1	gi|15920581|ref|NP_376250.1|	-	0.056	13.1	2.1	0.082	12.6	1.5	1.1	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
Prok-RING_1	PF14446.1	gi|15920581|ref|NP_376250.1|	-	0.14	11.9	0.9	0.18	11.5	0.6	1.2	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
YwqJ-deaminase	PF14431.1	gi|15920581|ref|NP_376250.1|	-	0.25	11.1	0.3	0.25	11.1	0.2	1.7	1	1	1	2	2	2	0	YwqJ-like	deaminase
RecR	PF02132.10	gi|15920581|ref|NP_376250.1|	-	0.37	10.2	1.9	3.8	7.0	1.3	1.9	1	1	1	2	2	2	0	RecR	protein
PhnA_Zn_Ribbon	PF08274.7	gi|15920581|ref|NP_376250.1|	-	0.41	10.4	0.3	0.41	10.4	0.2	1.8	1	1	1	2	2	2	0	PhnA	Zinc-Ribbon
RRN7	PF11781.3	gi|15920581|ref|NP_376250.1|	-	0.51	9.8	3.2	7.1	6.2	0.1	2.2	1	1	1	2	2	2	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
Zn-ribbon_8	PF09723.5	gi|15920581|ref|NP_376250.1|	-	2.1	8.3	5.5	59	3.7	3.9	2.1	1	1	1	2	2	2	0	Zinc	ribbon	domain
SHS2_Rpb7-N	PF03876.12	gi|15920582|ref|NP_376251.1|	-	3.7e-18	65.4	0.0	9.6e-18	64.0	0.0	1.7	2	0	0	2	2	2	1	SHS2	domain	found	in	N	terminus	of	Rpb7p/Rpc25p/MJ0397
S1	PF00575.18	gi|15920582|ref|NP_376251.1|	-	1.1e-14	54.3	1.3	2.5e-14	53.1	0.9	1.6	1	0	0	1	1	1	1	S1	RNA	binding	domain
RNA_pol_Rbc25	PF08292.7	gi|15920582|ref|NP_376251.1|	-	0.017	15.3	0.0	0.029	14.5	0.0	1.5	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	Rpc25
Tagatose_6_P_K	PF08013.6	gi|15920582|ref|NP_376251.1|	-	0.1	11.0	0.0	0.14	10.5	0.0	1.1	1	0	0	1	1	1	0	Tagatose	6	phosphate	kinase
PIN_4	PF13638.1	gi|15920583|ref|NP_376252.1|	-	1e-08	35.3	0.4	6.6e-07	29.4	0.3	2.1	1	1	0	1	1	1	1	PIN	domain
PIN	PF01850.16	gi|15920583|ref|NP_376252.1|	-	3.1e-07	30.7	0.1	5.2e-07	30.0	0.0	1.3	1	1	0	1	1	1	1	PIN	domain
Fcf1	PF04900.7	gi|15920583|ref|NP_376252.1|	-	2e-06	27.8	0.1	3.7e-06	26.9	0.0	1.4	1	1	0	1	1	1	1	Fcf1
DivIVA	PF05103.8	gi|15920583|ref|NP_376252.1|	-	0.0091	16.0	0.1	0.014	15.4	0.1	1.3	1	0	0	1	1	1	1	DivIVA	protein
GTP_EFTU	PF00009.22	gi|15920584|ref|NP_376253.1|	-	9.2e-44	149.1	0.0	1.4e-43	148.5	0.0	1.3	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
eIF2_C	PF09173.6	gi|15920584|ref|NP_376253.1|	-	1.1e-30	105.4	2.0	2.8e-30	104.1	1.4	1.7	1	0	0	1	1	1	1	Initiation	factor	eIF2	gamma,	C	terminal
GTP_EFTU_D2	PF03144.20	gi|15920584|ref|NP_376253.1|	-	2.9e-07	30.5	1.9	1.5e-06	28.1	0.2	2.8	3	0	0	3	3	3	1	Elongation	factor	Tu	domain	2
PduV-EutP	PF10662.4	gi|15920584|ref|NP_376253.1|	-	0.00013	21.5	0.4	0.53	9.7	0.0	2.5	2	0	0	2	2	2	2	Ethanolamine	utilisation	-	propanediol	utilisation
MMR_HSR1	PF01926.18	gi|15920584|ref|NP_376253.1|	-	0.00031	20.6	0.0	0.00069	19.5	0.0	1.6	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.13	gi|15920584|ref|NP_376253.1|	-	0.012	14.9	0.8	4.4	6.5	0.1	2.4	2	0	0	2	2	2	0	Ferrous	iron	transport	protein	B
ArgK	PF03308.11	gi|15920584|ref|NP_376253.1|	-	0.065	12.0	0.5	0.38	9.4	0.1	2.0	2	0	0	2	2	2	0	ArgK	protein
Miro	PF08477.8	gi|15920584|ref|NP_376253.1|	-	0.068	13.6	0.1	0.24	11.9	0.0	2.1	1	1	0	1	1	1	0	Miro-like	protein
Dynamin_N	PF00350.18	gi|15920584|ref|NP_376253.1|	-	0.083	12.7	0.1	0.57	9.9	0.0	2.2	1	1	0	2	2	2	0	Dynamin	family
DZR	PF12773.2	gi|15920584|ref|NP_376253.1|	-	0.094	12.5	1.1	0.16	11.8	0.8	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
Ribosomal_S6e	PF01092.14	gi|161751100|ref|NP_376254.2|	-	3e-22	78.5	0.8	2.2e-21	75.8	0.1	2.2	2	0	0	2	2	2	1	Ribosomal	protein	S6e
ATP-gua_Ptrans	PF00217.14	gi|161751100|ref|NP_376254.2|	-	0.037	13.3	0.6	0.054	12.8	0.4	1.2	1	0	0	1	1	1	0	ATP:guanido	phosphotransferase,	C-terminal	catalytic	domain
CbiX	PF01903.12	gi|15920586|ref|NP_376255.1|	-	1.4e-25	89.4	0.0	1.7e-25	89.1	0.0	1.1	1	0	0	1	1	1	1	CbiX
CbiK	PF06180.6	gi|15920586|ref|NP_376255.1|	-	5.1e-07	29.0	0.0	5.9e-07	28.8	0.0	1.1	1	0	0	1	1	1	1	Cobalt	chelatase	(CbiK)
Ferrochelatase	PF00762.14	gi|15920586|ref|NP_376255.1|	-	0.024	13.6	0.0	0.03	13.3	0.0	1.4	1	1	0	1	1	1	0	Ferrochelatase
Ribosomal_S13_N	PF08069.7	gi|15920587|ref|NP_376256.1|	-	1.4e-24	85.6	0.3	3.8e-24	84.2	0.1	1.8	2	0	0	2	2	2	1	Ribosomal	S13/S15	N-terminal	domain
Ribosomal_S15	PF00312.17	gi|15920587|ref|NP_376256.1|	-	3.3e-19	68.4	0.4	4.6e-19	67.9	0.3	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S15
RecX	PF02631.11	gi|15920587|ref|NP_376256.1|	-	0.096	12.8	0.5	5.5	7.2	0.0	2.2	2	0	0	2	2	2	0	RecX	family
YflT	PF11181.3	gi|15920587|ref|NP_376256.1|	-	0.13	12.3	0.0	0.18	11.9	0.0	1.3	1	0	0	1	1	1	0	Heat	induced	stress	protein	YflT
Meth_synt_2	PF01717.13	gi|15920588|ref|NP_376257.1|	-	3.7e-91	305.4	0.0	4.2e-91	305.2	0.0	1.0	1	0	0	1	1	1	1	Cobalamin-independent	synthase,	Catalytic	domain
Meth_synt_1	PF08267.7	gi|15920588|ref|NP_376257.1|	-	1.2e-25	90.4	2.4	2.1e-20	73.2	2.2	2.1	2	0	0	2	2	2	2	Cobalamin-independent	synthase,	N-terminal	domain
Meth_synt_1	PF08267.7	gi|15920589|ref|NP_376258.1|	-	1.2e-55	189.0	10.0	3.2e-53	181.0	7.0	2.0	1	1	0	1	1	1	1	Cobalamin-independent	synthase,	N-terminal	domain
Meth_synt_2	PF01717.13	gi|15920589|ref|NP_376258.1|	-	2.7e-15	56.1	0.0	3.9e-15	55.6	0.0	1.2	1	0	0	1	1	1	1	Cobalamin-independent	synthase,	Catalytic	domain
RYDR_ITPR	PF01365.16	gi|15920589|ref|NP_376258.1|	-	0.0053	16.0	0.2	0.072	12.2	0.0	2.2	1	1	1	2	2	2	1	RIH	domain
UBN2	PF14223.1	gi|15920589|ref|NP_376258.1|	-	0.14	11.9	7.5	0.14	11.9	0.6	3.1	3	0	0	3	3	3	0	gag-polypeptide	of	LTR	copia-type
PCNA_N	PF00705.13	gi|15920590|ref|NP_376259.1|	-	2.6e-18	65.7	0.8	2.3e-17	62.6	0.1	2.3	2	1	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	N-terminal	domain
PCNA_C	PF02747.10	gi|15920590|ref|NP_376259.1|	-	1.7e-10	40.8	0.6	1.2e-07	31.7	0.1	2.3	2	0	0	2	2	2	2	Proliferating	cell	nuclear	antigen,	C-terminal	domain
Rad1	PF02144.11	gi|15920590|ref|NP_376259.1|	-	8.1e-08	31.3	0.1	0.00021	20.1	0.0	2.2	1	1	0	2	2	2	2	Repair	protein	Rad1/Rec1/Rad17
Rad9	PF04139.8	gi|15920590|ref|NP_376259.1|	-	6.8e-05	22.1	0.1	0.00013	21.2	0.0	1.6	1	1	0	1	1	1	1	Rad9
GATase_3	PF07685.9	gi|15920592|ref|NP_376261.1|	-	4.5e-31	107.5	0.0	7.4e-31	106.8	0.0	1.4	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
CbiA	PF01656.18	gi|15920592|ref|NP_376261.1|	-	2.1e-15	56.6	0.0	4.1e-15	55.7	0.0	1.5	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_26	PF13500.1	gi|15920592|ref|NP_376261.1|	-	6.6e-14	51.9	0.0	3.8e-09	36.4	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
Peptidase_S51	PF03575.12	gi|15920592|ref|NP_376261.1|	-	0.053	13.2	0.0	0.1	12.3	0.0	1.4	1	0	0	1	1	1	0	Peptidase	family	S51
DUF2208	PF09973.4	gi|15920593|ref|NP_376262.1|	-	1.6e-85	286.0	21.4	1.8e-85	285.8	14.9	1.0	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2208)
DUF106	PF01956.11	gi|15920593|ref|NP_376262.1|	-	0.13	11.8	10.1	0.38	10.2	6.9	2.0	1	1	0	1	1	1	0	Integral	membrane	protein	DUF106
DHBP_synthase	PF00926.14	gi|15920595|ref|NP_376264.1|	-	2e-52	177.2	0.0	2.2e-52	177.1	0.0	1.0	1	0	0	1	1	1	1	3,4-dihydroxy-2-butanone	4-phosphate	synthase
DMRL_synthase	PF00885.14	gi|15920596|ref|NP_376265.1|	-	2.2e-17	63.0	0.1	2.5e-17	62.9	0.0	1.0	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
DMRL_synthase	PF00885.14	gi|15920597|ref|NP_376266.1|	-	5.7e-39	133.0	1.6	6.6e-39	132.8	1.1	1.0	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
ADSL_C	PF10397.4	gi|15920597|ref|NP_376266.1|	-	0.0044	17.0	0.3	0.014	15.3	0.1	1.8	2	0	0	2	2	2	1	Adenylosuccinate	lyase	C-terminus
Metallophos_3	PF14582.1	gi|15920597|ref|NP_376266.1|	-	0.0046	16.1	0.7	0.14	11.2	0.1	2.1	1	1	1	2	2	2	2	Metallophosphoesterase,	calcineurin	superfamily
DUF3356	PF11836.3	gi|15920597|ref|NP_376266.1|	-	0.11	12.2	0.9	3.5	7.5	0.1	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3356)
GGDN	PF05165.7	gi|15920598|ref|NP_376267.1|	-	1.4e-27	96.2	0.0	8e-13	47.9	0.0	2.1	1	1	1	2	2	2	2	GGDN	family
UPF0150	PF03681.10	gi|15920598|ref|NP_376267.1|	-	0.041	13.5	0.0	1.1	8.8	0.0	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0150)
Amidohydro_1	PF01979.15	gi|15920599|ref|NP_376268.1|	-	3.1e-05	23.7	0.0	4e-05	23.4	0.0	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|15920599|ref|NP_376268.1|	-	0.0061	16.6	0.0	0.0075	16.3	0.0	1.2	1	0	0	1	1	1	1	Amidohydrolase
PCNA_C	PF02747.10	gi|15920600|ref|NP_376269.1|	-	6e-09	35.8	0.2	4.7e-08	33.0	0.0	2.5	2	1	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	C-terminal	domain
PCNA_N	PF00705.13	gi|15920600|ref|NP_376269.1|	-	5.5e-07	29.1	0.6	2.8e-06	26.8	0.1	2.0	2	0	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	N-terminal	domain
CsgF	PF10614.4	gi|15920600|ref|NP_376269.1|	-	0.14	12.1	0.1	0.32	10.9	0.0	1.6	1	0	0	1	1	1	0	Type	VIII	secretion	system	(T8SS),	CsgF	protein
RNA_pol_Rpo13	PF12136.3	gi|15920601|ref|NP_376270.1|	-	2.5e-18	65.4	5.4	2.5e-18	65.4	3.7	3.5	3	1	0	3	3	3	1	RNA	polymerase	Rpo13	subunit	HTH	domain
Polyoma_coat	PF00718.15	gi|15920601|ref|NP_376270.1|	-	0.089	11.6	0.1	0.093	11.6	0.1	1.2	1	0	0	1	1	1	0	Polyomavirus	coat	protein
Peptidase_S46	PF10459.4	gi|15920601|ref|NP_376270.1|	-	5.7	5.2	14.7	6.8	4.9	10.2	1.0	1	0	0	1	1	1	0	Peptidase	S46
CDC45	PF02724.9	gi|15920601|ref|NP_376270.1|	-	5.8	4.8	14.5	7.1	4.5	10.1	1.1	1	0	0	1	1	1	0	CDC45-like	protein
Duffy_binding	PF05424.6	gi|15920601|ref|NP_376270.1|	-	6.3	6.5	11.4	9.6	5.9	7.9	1.3	1	1	0	1	1	1	0	Duffy	binding	domain
AAA_10	PF12846.2	gi|15920603|ref|NP_376272.1|	-	8.5e-30	104.2	0.6	1.2e-29	103.7	0.4	1.2	1	0	0	1	1	1	1	AAA-like	domain
DUF87	PF01935.12	gi|15920603|ref|NP_376272.1|	-	5.7e-10	39.3	4.9	3.9e-09	36.6	2.8	2.7	1	1	1	2	2	2	1	Domain	of	unknown	function	DUF87
AAA_22	PF13401.1	gi|15920603|ref|NP_376272.1|	-	6.4e-08	32.8	0.1	0.00015	21.9	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_17	PF13207.1	gi|15920603|ref|NP_376272.1|	-	1.1e-07	32.6	0.3	3e-07	31.2	0.2	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|15920603|ref|NP_376272.1|	-	3e-05	24.3	1.3	7.6e-05	23.0	0.1	2.2	2	0	0	2	2	2	1	AAA	domain
AAA	PF00004.24	gi|15920603|ref|NP_376272.1|	-	8.9e-05	22.6	0.6	0.0048	17.0	0.0	2.3	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF258	PF03193.11	gi|15920603|ref|NP_376272.1|	-	0.00063	18.9	0.0	0.0012	18.0	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_24	PF13479.1	gi|15920603|ref|NP_376272.1|	-	0.00087	18.9	0.0	0.0014	18.2	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
NACHT	PF05729.7	gi|15920603|ref|NP_376272.1|	-	0.0013	18.4	0.0	0.0093	15.6	0.0	2.1	2	0	0	2	2	2	1	NACHT	domain
NB-ARC	PF00931.17	gi|15920603|ref|NP_376272.1|	-	0.0013	17.6	0.0	0.0022	16.8	0.0	1.3	1	0	0	1	1	1	1	NB-ARC	domain
AAA_14	PF13173.1	gi|15920603|ref|NP_376272.1|	-	0.0014	18.4	5.0	0.015	15.1	0.0	3.3	3	0	0	3	3	3	1	AAA	domain
AAA_29	PF13555.1	gi|15920603|ref|NP_376272.1|	-	0.0019	17.6	0.2	0.0059	16.1	0.1	1.8	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
MobB	PF03205.9	gi|15920603|ref|NP_376272.1|	-	0.0025	17.5	0.1	0.0045	16.7	0.0	1.4	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ABC_tran	PF00005.22	gi|15920603|ref|NP_376272.1|	-	0.0029	17.9	0.0	0.0076	16.5	0.0	1.7	1	0	0	1	1	1	1	ABC	transporter
TrwB_AAD_bind	PF10412.4	gi|15920603|ref|NP_376272.1|	-	0.0031	16.1	0.0	0.23	10.0	0.0	2.2	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
MMR_HSR1	PF01926.18	gi|15920603|ref|NP_376272.1|	-	0.0048	16.8	0.5	0.044	13.7	0.1	2.3	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
FtsK_SpoIIIE	PF01580.13	gi|15920603|ref|NP_376272.1|	-	0.0065	15.9	0.0	0.013	14.9	0.0	1.4	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
RNA_helicase	PF00910.17	gi|15920603|ref|NP_376272.1|	-	0.0068	16.5	0.2	0.12	12.5	0.0	2.6	2	0	0	2	2	2	1	RNA	helicase
AAA_16	PF13191.1	gi|15920603|ref|NP_376272.1|	-	0.0075	16.2	0.0	0.014	15.3	0.0	1.4	1	0	0	1	1	1	1	AAA	ATPase	domain
IstB_IS21	PF01695.12	gi|15920603|ref|NP_376272.1|	-	0.0075	15.6	0.0	0.017	14.5	0.0	1.5	2	0	0	2	2	1	1	IstB-like	ATP	binding	protein
AAA_5	PF07728.9	gi|15920603|ref|NP_376272.1|	-	0.0099	15.6	0.0	0.021	14.5	0.0	1.5	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
NTPase_1	PF03266.10	gi|15920603|ref|NP_376272.1|	-	0.01	15.5	0.2	0.037	13.7	0.0	1.9	2	0	0	2	2	2	0	NTPase
TraG-D_C	PF12696.2	gi|15920603|ref|NP_376272.1|	-	0.013	15.3	0.0	0.032	14.1	0.0	1.6	1	0	0	1	1	1	0	TraM	recognition	site	of	TraD	and	TraG
AAA_33	PF13671.1	gi|15920603|ref|NP_376272.1|	-	0.023	14.5	0.0	0.044	13.6	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Sigma54_activat	PF00158.21	gi|15920603|ref|NP_376272.1|	-	0.063	12.7	0.0	0.12	11.8	0.0	1.4	1	0	0	1	1	1	0	Sigma-54	interaction	domain
Hpr_kinase_C	PF07475.7	gi|15920603|ref|NP_376272.1|	-	0.092	12.0	0.0	0.19	11.0	0.0	1.5	1	0	0	1	1	1	0	HPr	Serine	kinase	C-terminal	domain
SRP54	PF00448.17	gi|15920603|ref|NP_376272.1|	-	0.1	12.0	0.4	13	5.1	0.0	2.3	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
DUF815	PF05673.8	gi|15920603|ref|NP_376272.1|	-	0.11	11.4	0.0	0.19	10.6	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
AAA_28	PF13521.1	gi|15920603|ref|NP_376272.1|	-	0.12	12.3	0.0	0.22	11.4	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
T2SE	PF00437.15	gi|15920603|ref|NP_376272.1|	-	0.14	11.0	0.2	0.3	9.9	0.0	1.5	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
DEAD	PF00270.24	gi|15920604|ref|NP_376273.1|	-	2.9e-35	121.2	0.1	7.2e-34	116.7	0.0	2.3	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
DEAD_assoc	PF08494.6	gi|15920604|ref|NP_376273.1|	-	6.2e-30	104.3	0.0	1.4e-29	103.2	0.0	1.6	1	0	0	1	1	1	1	DEAD/H	associated
Helicase_C	PF00271.26	gi|15920604|ref|NP_376273.1|	-	1.5e-18	66.3	0.7	1.8e-16	59.7	0.1	3.5	3	0	0	3	3	3	1	Helicase	conserved	C-terminal	domain
HypA	PF01155.14	gi|15920604|ref|NP_376273.1|	-	0.0009	18.9	0.0	0.0021	17.7	0.0	1.6	1	0	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
DUF1212	PF06738.7	gi|15920604|ref|NP_376273.1|	-	0.34	10.3	0.4	3.3	7.1	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1212)
KOW	PF00467.24	gi|15920605|ref|NP_376274.1|	-	8.3e-05	22.1	1.2	8.3e-05	22.1	0.8	1.7	2	0	0	2	2	2	1	KOW	motif
Ribosomal_L14e	PF01929.12	gi|15920605|ref|NP_376274.1|	-	0.00017	21.8	0.1	0.00026	21.2	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L14
XisI	PF08869.6	gi|15920605|ref|NP_376274.1|	-	0.03	14.4	0.1	0.036	14.1	0.1	1.1	1	0	0	1	1	1	0	XisI	protein
YbbR	PF07949.7	gi|15920605|ref|NP_376274.1|	-	0.056	13.5	0.2	0.061	13.4	0.2	1.2	1	0	0	1	1	1	0	YbbR-like	protein
DKCLD	PF08068.7	gi|15920606|ref|NP_376275.1|	-	2e-15	56.4	0.0	2.5e-15	56.1	0.0	1.1	1	0	0	1	1	1	1	DKCLD	(NUC011)	domain
TruB_N	PF01509.13	gi|15920606|ref|NP_376275.1|	-	0.14	12.2	0.0	0.21	11.7	0.0	1.3	1	0	0	1	1	1	0	TruB	family	pseudouridylate	synthase	(N	terminal	domain)
PUA	PF01472.15	gi|15920607|ref|NP_376276.1|	-	3.9e-20	71.3	0.4	6.4e-20	70.6	0.3	1.4	1	0	0	1	1	1	1	PUA	domain
TruB_N	PF01509.13	gi|15920607|ref|NP_376276.1|	-	8.6e-07	29.2	0.1	3.4e-05	24.0	0.1	2.6	1	1	0	1	1	1	1	TruB	family	pseudouridylate	synthase	(N	terminal	domain)
MTS	PF05175.9	gi|15920608|ref|NP_376277.1|	-	6.8e-36	123.1	0.0	7.9e-36	122.9	0.0	1.0	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.1	gi|15920608|ref|NP_376277.1|	-	7.4e-12	45.1	0.1	1e-11	44.6	0.1	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|15920608|ref|NP_376277.1|	-	1.5e-10	41.6	0.0	2e-10	41.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|15920608|ref|NP_376277.1|	-	9.3e-08	32.1	0.0	1.3e-07	31.6	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|15920608|ref|NP_376277.1|	-	3.9e-07	29.5	0.0	4.8e-07	29.1	0.0	1.3	1	1	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_12	PF08242.7	gi|15920608|ref|NP_376277.1|	-	9.3e-07	29.2	0.0	1.4e-06	28.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_4	PF02390.12	gi|15920608|ref|NP_376277.1|	-	3.2e-06	26.3	0.1	5.4e-06	25.5	0.1	1.3	1	0	0	1	1	1	1	Putative	methyltransferase
Met_10	PF02475.11	gi|15920608|ref|NP_376277.1|	-	3.5e-06	26.7	0.2	4.3e-06	26.4	0.1	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
GidB	PF02527.10	gi|15920608|ref|NP_376277.1|	-	7.9e-06	25.1	0.1	1.6e-05	24.1	0.1	1.6	1	1	0	1	1	1	1	rRNA	small	subunit	methyltransferase	G
FmrO	PF07091.6	gi|15920608|ref|NP_376277.1|	-	2e-05	23.7	0.0	3.3e-05	23.0	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	RNA	methyltransferase	(FmrO)
Methyltransf_15	PF09445.5	gi|15920608|ref|NP_376277.1|	-	3.2e-05	23.5	0.3	0.00015	21.3	0.2	1.9	1	1	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_16	PF10294.4	gi|15920608|ref|NP_376277.1|	-	0.00064	19.2	0.1	0.00097	18.6	0.0	1.3	1	0	0	1	1	1	1	Putative	methyltransferase
Cons_hypoth95	PF03602.10	gi|15920608|ref|NP_376277.1|	-	0.00078	18.8	0.0	0.00096	18.5	0.0	1.1	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
DUF633	PF04816.7	gi|15920608|ref|NP_376277.1|	-	0.0018	17.6	0.1	0.0028	17.0	0.1	1.3	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF633)
Methyltransf_25	PF13649.1	gi|15920608|ref|NP_376277.1|	-	0.0023	18.2	0.0	0.0037	17.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|15920608|ref|NP_376277.1|	-	0.0027	17.4	0.0	0.005	16.5	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|15920608|ref|NP_376277.1|	-	0.004	16.7	0.0	0.0051	16.4	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_11	PF08241.7	gi|15920608|ref|NP_376277.1|	-	0.0044	17.4	0.0	0.0076	16.7	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_5	PF01795.14	gi|15920608|ref|NP_376277.1|	-	0.016	14.4	0.0	0.039	13.2	0.0	1.5	2	0	0	2	2	2	0	MraW	methylase	family
CMAS	PF02353.15	gi|15920608|ref|NP_376277.1|	-	0.061	12.3	0.0	0.098	11.7	0.0	1.4	1	1	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
rRNA_methylase	PF06962.7	gi|15920608|ref|NP_376277.1|	-	0.082	12.6	0.5	5.3	6.7	0.1	2.2	2	0	0	2	2	2	0	Putative	rRNA	methylase
DUF43	PF01861.11	gi|15920608|ref|NP_376277.1|	-	0.092	11.7	0.0	0.14	11.1	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF43
Glycos_transf_1	PF00534.15	gi|15920609|ref|NP_376278.1|	-	2.1e-24	85.8	0.0	4.8e-24	84.7	0.0	1.6	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|15920609|ref|NP_376278.1|	-	3.4e-05	24.0	0.0	5.9e-05	23.2	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|15920609|ref|NP_376278.1|	-	0.00023	21.3	0.0	0.00039	20.5	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
FDX-ACB	PF03147.9	gi|15920610|ref|NP_376279.1|	-	0.15	12.2	0.5	6.8	6.9	0.0	2.6	3	0	0	3	3	3	0	Ferredoxin-fold	anticodon	binding	domain
SSV1_ORF_D-335	PF07935.6	gi|15920611|ref|NP_376280.1|	-	3e-32	110.1	2.0	3.4e-32	109.9	1.4	1.0	1	0	0	1	1	1	1	ORF	D-335-like	protein
Archease	PF01951.11	gi|15920612|ref|NP_376281.1|	-	3.1e-48	163.1	0.7	3.5e-48	163.0	0.5	1.0	1	0	0	1	1	1	1	Archease	protein	family	(MTH1598/TM1083)
GrpE	PF01025.14	gi|15920612|ref|NP_376281.1|	-	0.023	14.2	0.3	0.63	9.5	0.0	2.0	2	0	0	2	2	2	0	GrpE
DUF3043	PF11241.3	gi|15920614|ref|NP_376283.1|	-	0.2	11.2	2.3	0.4	10.2	1.6	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3043)
AAA_18	PF13238.1	gi|15920615|ref|NP_376284.1|	-	3.8e-22	78.9	0.9	5.6e-22	78.4	0.6	1.3	1	0	0	1	1	1	1	AAA	domain
Cytidylate_kin2	PF13189.1	gi|15920615|ref|NP_376284.1|	-	2e-21	76.6	0.8	1e-20	74.3	0.6	1.8	1	1	0	1	1	1	1	Cytidylate	kinase-like	family
AAA_17	PF13207.1	gi|15920615|ref|NP_376284.1|	-	2.7e-14	54.0	0.7	4.3e-14	53.3	0.3	1.4	1	1	0	1	1	1	1	AAA	domain
SKI	PF01202.17	gi|15920615|ref|NP_376284.1|	-	1.6e-09	37.8	0.9	3.1e-09	36.9	0.6	1.5	1	1	0	1	1	1	1	Shikimate	kinase
AAA_33	PF13671.1	gi|15920615|ref|NP_376284.1|	-	8.1e-07	29.0	0.0	4.9e-05	23.2	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
ADK	PF00406.17	gi|15920615|ref|NP_376284.1|	-	8.4e-07	28.9	0.0	1.5e-06	28.1	0.0	1.8	1	1	0	1	1	1	1	Adenylate	kinase
CoaE	PF01121.15	gi|15920615|ref|NP_376284.1|	-	1.3e-06	27.9	0.1	0.00024	20.5	0.0	2.2	1	1	1	2	2	2	1	Dephospho-CoA	kinase
Rad17	PF03215.10	gi|15920615|ref|NP_376284.1|	-	1.7e-05	23.6	0.0	2.3e-05	23.2	0.0	1.2	1	0	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
PRK	PF00485.13	gi|15920615|ref|NP_376284.1|	-	9.1e-05	22.1	0.5	0.068	12.7	0.0	2.2	1	1	1	2	2	2	2	Phosphoribulokinase	/	Uridine	kinase	family
KTI12	PF08433.5	gi|15920615|ref|NP_376284.1|	-	0.0001	21.6	0.2	0.0002	20.6	0.1	1.6	1	1	0	1	1	1	1	Chromatin	associated	protein	KTI12
AAA	PF00004.24	gi|15920615|ref|NP_376284.1|	-	0.00021	21.4	0.0	0.00039	20.6	0.0	1.5	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_28	PF13521.1	gi|15920615|ref|NP_376284.1|	-	0.00029	20.8	0.0	0.00039	20.4	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|15920615|ref|NP_376284.1|	-	0.00036	20.6	0.0	0.00043	20.4	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_21	PF13304.1	gi|15920615|ref|NP_376284.1|	-	0.00065	19.7	6.6	0.00086	19.3	4.5	1.2	1	0	0	1	1	1	1	AAA	domain
Cytidylate_kin	PF02224.13	gi|15920615|ref|NP_376284.1|	-	0.00067	19.1	0.1	0.00092	18.6	0.1	1.3	1	0	0	1	1	1	1	Cytidylate	kinase
AAA_16	PF13191.1	gi|15920615|ref|NP_376284.1|	-	0.00072	19.5	0.1	0.0012	18.8	0.1	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
ABC_tran	PF00005.22	gi|15920615|ref|NP_376284.1|	-	0.00097	19.4	0.5	0.001	19.3	0.3	1.4	1	1	0	1	1	1	1	ABC	transporter
RNA_helicase	PF00910.17	gi|15920615|ref|NP_376284.1|	-	0.0011	19.0	0.0	0.0022	18.1	0.0	1.6	1	0	0	1	1	1	1	RNA	helicase
Thymidylate_kin	PF02223.12	gi|15920615|ref|NP_376284.1|	-	0.0012	18.3	1.2	0.97	8.7	0.0	3.0	2	1	1	3	3	3	1	Thymidylate	kinase
NTPase_1	PF03266.10	gi|15920615|ref|NP_376284.1|	-	0.0014	18.3	0.0	0.0028	17.3	0.0	1.6	2	1	0	2	2	1	1	NTPase
AAA_19	PF13245.1	gi|15920615|ref|NP_376284.1|	-	0.0017	18.0	0.0	0.0027	17.4	0.0	1.4	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_14	PF13173.1	gi|15920615|ref|NP_376284.1|	-	0.0021	17.9	0.1	0.0052	16.6	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
Sigma54_activ_2	PF14532.1	gi|15920615|ref|NP_376284.1|	-	0.003	17.5	0.0	0.023	14.7	0.0	2.3	1	1	0	1	1	1	1	Sigma-54	interaction	domain
RuvB_N	PF05496.7	gi|15920615|ref|NP_376284.1|	-	0.0044	16.0	0.0	0.0067	15.5	0.0	1.4	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
Arch_ATPase	PF01637.13	gi|15920615|ref|NP_376284.1|	-	0.0058	16.3	1.1	0.0088	15.7	0.8	1.5	1	1	0	1	1	1	1	Archaeal	ATPase
Zeta_toxin	PF06414.7	gi|15920615|ref|NP_376284.1|	-	0.0064	15.6	0.0	0.014	14.4	0.0	1.6	1	0	0	1	1	1	1	Zeta	toxin
T2SE	PF00437.15	gi|15920615|ref|NP_376284.1|	-	0.0064	15.4	1.1	0.045	12.6	0.1	2.0	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
APS_kinase	PF01583.15	gi|15920615|ref|NP_376284.1|	-	0.015	14.9	0.0	0.028	14.0	0.0	1.5	2	0	0	2	2	1	0	Adenylylsulphate	kinase
AAA_24	PF13479.1	gi|15920615|ref|NP_376284.1|	-	0.034	13.7	0.2	0.077	12.5	0.1	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_5	PF07728.9	gi|15920615|ref|NP_376284.1|	-	0.037	13.7	0.0	0.079	12.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_31	PF13614.1	gi|15920615|ref|NP_376284.1|	-	0.039	13.8	0.0	0.045	13.6	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|15920615|ref|NP_376284.1|	-	0.041	13.3	0.6	0.072	12.5	0.1	1.5	2	0	0	2	2	2	0	AAA-like	domain
Viral_helicase1	PF01443.13	gi|15920615|ref|NP_376284.1|	-	0.046	13.2	0.0	0.062	12.8	0.0	1.3	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
AAA_29	PF13555.1	gi|15920615|ref|NP_376284.1|	-	0.073	12.6	0.1	0.15	11.6	0.1	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
Mg_chelatase	PF01078.16	gi|15920615|ref|NP_376284.1|	-	0.075	12.1	0.0	0.12	11.4	0.0	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
TIP49	PF06068.8	gi|15920615|ref|NP_376284.1|	-	0.076	11.7	2.2	0.22	10.1	0.1	2.3	2	1	1	3	3	3	0	TIP49	C-terminus
AAA_30	PF13604.1	gi|15920615|ref|NP_376284.1|	-	0.09	12.3	0.1	0.52	9.8	0.0	2.0	1	1	1	2	2	2	0	AAA	domain
AAA_25	PF13481.1	gi|15920615|ref|NP_376284.1|	-	0.12	11.7	0.0	0.23	10.8	0.0	1.5	2	0	0	2	2	2	0	AAA	domain
Rubrerythrin	PF02915.12	gi|15920615|ref|NP_376284.1|	-	0.12	12.6	2.5	0.23	11.7	1.7	1.5	1	1	0	1	1	1	0	Rubrerythrin
NACHT	PF05729.7	gi|15920615|ref|NP_376284.1|	-	0.13	11.9	0.0	0.2	11.3	0.0	1.3	1	0	0	1	1	1	0	NACHT	domain
Guanylate_kin	PF00625.16	gi|15920615|ref|NP_376284.1|	-	0.19	11.1	1.8	0.6	9.5	0.1	2.2	1	1	1	2	2	2	0	Guanylate	kinase
AAA_23	PF13476.1	gi|15920615|ref|NP_376284.1|	-	1.1	9.5	7.6	7.5	6.8	5.3	2.1	1	1	0	1	1	1	0	AAA	domain
DUF87	PF01935.12	gi|15920615|ref|NP_376284.1|	-	1.9	8.2	5.8	6.6	6.4	0.4	3.0	1	1	0	2	2	2	0	Domain	of	unknown	function	DUF87
Ribosomal_L34e	PF01199.13	gi|15920616|ref|NP_376285.1|	-	3.2e-26	91.3	5.4	3.5e-26	91.2	3.8	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L34e
Gin	PF10764.4	gi|15920616|ref|NP_376285.1|	-	0.0036	16.9	0.7	0.67	9.7	0.0	2.4	2	0	0	2	2	2	2	Inhibitor	of	sigma-G	Gin
zf-C3HC4_3	PF13920.1	gi|15920616|ref|NP_376285.1|	-	0.012	15.3	0.6	2.7	7.7	0.1	2.1	2	0	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
NinF	PF05810.7	gi|15920616|ref|NP_376285.1|	-	0.015	15.0	0.5	0.1	12.4	0.0	2.0	2	0	0	2	2	2	0	NinF	protein
zf-C4pol	PF14260.1	gi|15920616|ref|NP_376285.1|	-	0.022	14.7	1.1	0.043	13.8	0.8	1.5	1	1	0	1	1	1	0	C4-type	zinc-finger	of	DNA	polymerase	delta
zf-P11	PF03854.9	gi|15920616|ref|NP_376285.1|	-	0.035	13.5	1.5	1.8	8.1	0.1	2.3	2	0	0	2	2	2	0	P-11	zinc	finger
Prim_Zn_Ribbon	PF08273.7	gi|15920616|ref|NP_376285.1|	-	0.088	12.9	0.1	1.1	9.3	0.0	2.1	2	0	0	2	2	2	0	Zinc-binding	domain	of	primase-helicase
zf-BED	PF02892.10	gi|15920616|ref|NP_376285.1|	-	0.12	12.1	0.4	0.12	12.1	0.3	1.8	2	0	0	2	2	2	0	BED	zinc	finger
DUF581	PF04570.9	gi|15920616|ref|NP_376285.1|	-	0.34	10.2	0.1	0.34	10.2	0.1	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF581)
DUF4428	PF14471.1	gi|15920616|ref|NP_376285.1|	-	1.3	8.8	5.4	31	4.4	3.8	2.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4428)
Synaptobrevin	PF00957.16	gi|15920617|ref|NP_376286.1|	-	0.1	12.2	0.2	0.1	12.2	0.1	1.8	2	0	0	2	2	2	0	Synaptobrevin
AAA_18	PF13238.1	gi|15920618|ref|NP_376287.1|	-	1.7e-12	47.7	0.2	2.1e-12	47.4	0.1	1.1	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|15920618|ref|NP_376287.1|	-	1.7e-07	32.0	0.0	2.5e-07	31.5	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
SRP54	PF00448.17	gi|15920618|ref|NP_376287.1|	-	3.9e-05	23.1	0.0	5.3e-05	22.7	0.0	1.2	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
Thymidylate_kin	PF02223.12	gi|15920618|ref|NP_376287.1|	-	4e-05	23.0	0.1	0.066	12.5	0.0	2.3	2	0	0	2	2	2	2	Thymidylate	kinase
ATP_bind_1	PF03029.12	gi|15920618|ref|NP_376287.1|	-	0.00012	21.6	0.0	0.00021	20.9	0.0	1.4	1	0	0	1	1	1	1	Conserved	hypothetical	ATP	binding	protein
NTPase_1	PF03266.10	gi|15920618|ref|NP_376287.1|	-	0.00016	21.4	0.8	0.00029	20.6	0.5	1.4	1	0	0	1	1	1	1	NTPase
AAA_22	PF13401.1	gi|15920618|ref|NP_376287.1|	-	0.00031	20.9	0.1	0.00052	20.1	0.1	1.5	1	1	0	1	1	1	1	AAA	domain
KTI12	PF08433.5	gi|15920618|ref|NP_376287.1|	-	0.00049	19.4	0.1	0.00069	18.9	0.0	1.2	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
AAA_28	PF13521.1	gi|15920618|ref|NP_376287.1|	-	0.001	19.0	0.0	0.0031	17.5	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_30	PF13604.1	gi|15920618|ref|NP_376287.1|	-	0.0029	17.2	0.0	0.0049	16.4	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|15920618|ref|NP_376287.1|	-	0.0049	16.8	0.0	0.006	16.5	0.0	1.3	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_19	PF13245.1	gi|15920618|ref|NP_376287.1|	-	0.006	16.3	0.1	0.016	14.9	0.0	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
ArgK	PF03308.11	gi|15920618|ref|NP_376287.1|	-	0.011	14.5	0.1	0.016	13.9	0.1	1.3	1	0	0	1	1	1	0	ArgK	protein
DUF2075	PF09848.4	gi|15920618|ref|NP_376287.1|	-	0.015	14.2	0.1	0.019	13.9	0.1	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_14	PF13173.1	gi|15920618|ref|NP_376287.1|	-	0.016	15.1	0.4	0.033	14.1	0.2	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_15	PF13175.1	gi|15920618|ref|NP_376287.1|	-	0.024	13.6	0.2	0.026	13.6	0.1	1.1	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_33	PF13671.1	gi|15920618|ref|NP_376287.1|	-	0.033	14.0	0.8	0.3	10.9	0.5	2.1	1	1	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|15920618|ref|NP_376287.1|	-	0.046	13.9	1.1	0.14	12.3	0.8	2.0	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
PRK	PF00485.13	gi|15920618|ref|NP_376287.1|	-	0.07	12.6	0.0	0.1	12.1	0.0	1.2	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
NACHT	PF05729.7	gi|15920618|ref|NP_376287.1|	-	0.071	12.7	0.0	0.094	12.3	0.0	1.3	1	0	0	1	1	1	0	NACHT	domain
Arch_ATPase	PF01637.13	gi|15920618|ref|NP_376287.1|	-	0.076	12.7	0.1	0.11	12.1	0.1	1.3	1	0	0	1	1	1	0	Archaeal	ATPase
cobW	PF02492.14	gi|15920618|ref|NP_376287.1|	-	0.082	12.3	0.1	0.15	11.5	0.1	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
Viral_helicase1	PF01443.13	gi|15920618|ref|NP_376287.1|	-	0.11	11.9	0.0	0.16	11.4	0.0	1.3	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
MobB	PF03205.9	gi|15920618|ref|NP_376287.1|	-	0.13	11.9	0.5	0.29	10.8	0.4	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
SecY	PF00344.15	gi|15920619|ref|NP_376288.1|	-	1.7e-75	254.1	33.9	2.4e-75	253.6	23.5	1.2	1	0	0	1	1	1	1	SecY	translocase
Plug_translocon	PF10559.4	gi|15920619|ref|NP_376288.1|	-	5.6e-08	32.1	1.3	1.4e-07	30.8	0.3	2.3	2	0	0	2	2	2	1	Plug	domain	of	Sec61p
Ribosomal_L18e	PF00828.14	gi|15920620|ref|NP_376289.1|	-	1.8e-27	96.2	2.7	2.3e-27	95.8	1.9	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L18e/L15
Ribosomal_L30	PF00327.15	gi|15920621|ref|NP_376290.1|	-	5.1e-16	58.0	0.0	1e-15	57.0	0.0	1.6	1	0	0	1	1	1	1	Ribosomal	protein	L30p/L7e
Ribosomal_S5_C	PF03719.10	gi|15920622|ref|NP_376291.1|	-	1.3e-21	75.6	0.0	3.1e-21	74.4	0.0	1.6	1	0	0	1	1	1	1	Ribosomal	protein	S5,	C-terminal	domain
Ribosomal_S5	PF00333.15	gi|15920622|ref|NP_376291.1|	-	7.6e-21	73.6	1.5	7.6e-21	73.6	1.0	1.7	2	0	0	2	2	2	1	Ribosomal	protein	S5,	N-terminal	domain
Ribosomal_L18p	PF00861.17	gi|15920623|ref|NP_376292.1|	-	4.7e-36	123.5	0.3	6.6e-36	123.1	0.2	1.2	1	0	0	1	1	1	1	Ribosomal	L18p/L5e	family
Ribosomal_L18_c	PF14204.1	gi|15920623|ref|NP_376292.1|	-	6.9e-12	45.7	0.0	1.2e-11	45.0	0.0	1.4	1	0	0	1	1	1	1	Ribosomal	L18	C-terminal	region
Ribosomal_L19e	PF01280.15	gi|15920624|ref|NP_376293.1|	-	2.4e-49	166.9	12.7	2.6e-49	166.7	8.8	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L19e
S4	PF01479.20	gi|15920624|ref|NP_376293.1|	-	0.044	13.2	0.0	0.11	11.9	0.0	1.7	1	0	0	1	1	1	0	S4	domain
Cas_Csa5	PF09702.5	gi|15920624|ref|NP_376293.1|	-	0.051	13.6	0.1	0.085	12.9	0.1	1.3	1	0	0	1	1	1	0	CRISPR-associated	protein	(Cas_Csa5)
DUF4258	PF14076.1	gi|15920624|ref|NP_376293.1|	-	0.11	12.5	0.6	0.23	11.5	0.4	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4258)
DUF910	PF06014.6	gi|15920624|ref|NP_376293.1|	-	0.24	11.3	1.1	24	4.9	0.0	2.9	3	0	0	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF910)
Ribosomal_L32e	PF01655.13	gi|15920625|ref|NP_376294.1|	-	3.7e-36	123.5	0.3	5.1e-36	123.0	0.2	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L32
Ribosomal_L6	PF00347.18	gi|15920626|ref|NP_376295.1|	-	1.8e-28	98.8	12.7	2.9e-15	56.5	2.1	2.1	2	0	0	2	2	2	2	Ribosomal	protein	L6
tRNA_anti-like	PF12869.2	gi|15920626|ref|NP_376295.1|	-	0.17	11.3	4.8	5.1	6.5	3.3	2.2	1	1	0	1	1	1	0	tRNA_anti-like
DUF4469	PF14734.1	gi|15920626|ref|NP_376295.1|	-	0.44	10.4	6.6	2.5	8.0	0.5	2.6	2	2	0	2	2	2	0	Domain	of	unknown	function	(DUF4469)	with	IG-like	fold
RNA_bind_2	PF10133.4	gi|15920626|ref|NP_376295.1|	-	0.56	10.2	3.7	1.7	8.7	1.0	2.7	2	1	1	3	3	3	0	Predicted	RNA-binding	protein
Ribosomal_S8	PF00410.14	gi|15920627|ref|NP_376296.1|	-	5.7e-26	90.8	0.0	7.3e-26	90.5	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S8
Ribosomal_S14	PF00253.16	gi|161751099|ref|NP_376297.2|	-	1e-17	63.2	4.8	1.1e-17	63.0	3.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S14p/S29e
Zn_Tnp_IS1595	PF12760.2	gi|161751099|ref|NP_376297.2|	-	0.0089	15.8	2.9	0.012	15.4	2.0	1.2	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
zf-FPG_IleRS	PF06827.9	gi|161751099|ref|NP_376297.2|	-	0.013	15.1	3.2	0.024	14.2	2.2	1.5	1	0	0	1	1	1	0	Zinc	finger	found	in	FPG	and	IleRS
zf-C4pol	PF14260.1	gi|161751099|ref|NP_376297.2|	-	0.05	13.6	0.9	0.86	9.6	0.0	2.0	1	1	1	2	2	2	0	C4-type	zinc-finger	of	DNA	polymerase	delta
zf-P11	PF03854.9	gi|161751099|ref|NP_376297.2|	-	0.11	12.0	0.5	0.15	11.5	0.3	1.2	1	0	0	1	1	1	0	P-11	zinc	finger
Prim_Zn_Ribbon	PF08273.7	gi|161751099|ref|NP_376297.2|	-	0.11	12.6	3.8	0.31	11.1	0.2	2.1	1	1	1	2	2	2	0	Zinc-binding	domain	of	primase-helicase
DZR	PF12773.2	gi|161751099|ref|NP_376297.2|	-	0.11	12.2	0.7	0.17	11.7	0.5	1.4	1	1	0	1	1	1	0	Double	zinc	ribbon
A2L_zn_ribbon	PF08792.5	gi|161751099|ref|NP_376297.2|	-	0.29	10.6	1.8	0.44	10.0	1.2	1.2	1	0	0	1	1	1	0	A2L	zinc	ribbon	domain
zf-HYPF	PF07503.7	gi|161751099|ref|NP_376297.2|	-	0.3	10.5	2.3	2.1	7.8	0.1	2.1	2	0	0	2	2	2	0	HypF	finger
Ribosomal_L40e	PF01020.12	gi|161751099|ref|NP_376297.2|	-	1.2	8.8	5.9	0.64	9.6	0.3	2.1	1	1	1	2	2	2	0	Ribosomal	L40e	family
Ribosomal_L5_C	PF00673.16	gi|15920629|ref|NP_376298.1|	-	1.6e-28	98.2	0.0	5e-28	96.6	0.0	1.7	2	0	0	2	2	2	1	ribosomal	L5P	family	C-terminus
Ribosomal_L5	PF00281.14	gi|15920629|ref|NP_376298.1|	-	8.5e-21	73.4	0.1	1.6e-20	72.6	0.0	1.5	1	0	0	1	1	1	1	Ribosomal	protein	L5
Ribosomal_S4e	PF00900.15	gi|161751098|ref|NP_376299.2|	-	2.3e-27	94.4	0.5	2.3e-27	94.4	0.4	2.0	3	0	0	3	3	3	1	Ribosomal	family	S4e
S4	PF01479.20	gi|161751098|ref|NP_376299.2|	-	3.2e-11	42.4	0.0	8.1e-11	41.1	0.0	1.8	1	0	0	1	1	1	1	S4	domain
RS4NT	PF08071.7	gi|161751098|ref|NP_376299.2|	-	2e-08	33.9	0.4	4.6e-08	32.7	0.3	1.6	1	0	0	1	1	1	1	RS4NT	(NUC023)	domain
S4_2	PF13275.1	gi|161751098|ref|NP_376299.2|	-	0.0047	16.4	0.0	0.011	15.2	0.0	1.6	1	0	0	1	1	1	1	S4	domain
KOW	PF00467.24	gi|161751098|ref|NP_376299.2|	-	0.045	13.5	0.7	0.15	11.8	0.5	2.0	1	0	0	1	1	1	0	KOW	motif
KOW	PF00467.24	gi|15920631|ref|NP_376300.1|	-	0.068	12.9	0.2	0.15	11.8	0.1	1.6	1	0	0	1	1	1	0	KOW	motif
Ribosomal_L14	PF00238.14	gi|15920632|ref|NP_376301.1|	-	1.8e-37	127.7	0.0	2e-37	127.6	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L14p/L23e
PAS_3	PF08447.6	gi|15920632|ref|NP_376301.1|	-	0.04	14.0	0.0	0.052	13.6	0.0	1.3	1	0	0	1	1	1	0	PAS	fold
Ribosomal_S17	PF00366.15	gi|15920633|ref|NP_376302.1|	-	1.3e-19	69.9	0.5	2.1e-19	69.3	0.3	1.3	1	0	0	1	1	1	1	Ribosomal	protein	S17
Ribosomal_L29	PF00831.18	gi|15920634|ref|NP_376303.1|	-	1.6e-13	50.0	9.0	1.6e-13	50.0	6.2	2.6	2	1	0	2	2	2	1	Ribosomal	L29	protein
DUF3294	PF07957.6	gi|15920634|ref|NP_376303.1|	-	0.012	15.2	2.0	0.012	15.2	1.4	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3294)
IncFII_repA	PF02387.10	gi|15920634|ref|NP_376303.1|	-	0.039	13.1	4.0	0.021	13.9	1.7	1.4	1	1	0	1	1	1	0	IncFII	RepA	protein	family
Baculo_PEP_C	PF04513.7	gi|15920634|ref|NP_376303.1|	-	0.043	13.6	2.6	0.063	13.1	1.8	1.2	1	0	0	1	1	1	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Terminase_GpA	PF05876.7	gi|15920634|ref|NP_376303.1|	-	0.092	11.0	0.0	0.11	10.8	0.0	1.0	1	0	0	1	1	1	0	Phage	terminase	large	subunit	(GpA)
DUF29	PF01724.11	gi|15920634|ref|NP_376303.1|	-	0.15	11.9	4.6	0.15	11.8	3.2	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF29
AAA_13	PF13166.1	gi|15920634|ref|NP_376303.1|	-	0.16	10.4	8.0	0.17	10.3	5.6	1.0	1	0	0	1	1	1	0	AAA	domain
IncA	PF04156.9	gi|15920634|ref|NP_376303.1|	-	0.43	10.1	7.1	0.54	9.8	5.0	1.1	1	0	0	1	1	1	0	IncA	protein
Erp_C	PF06780.6	gi|15920634|ref|NP_376303.1|	-	0.6	9.9	8.7	0.68	9.7	6.0	1.1	1	0	0	1	1	1	0	Erp	protein	C-terminus
BRE1	PF08647.6	gi|15920634|ref|NP_376303.1|	-	0.71	9.8	8.8	0.13	12.2	2.6	2.2	1	1	1	2	2	2	0	BRE1	E3	ubiquitin	ligase
DUF1664	PF07889.7	gi|15920634|ref|NP_376303.1|	-	1.1	9.0	4.2	1.9	8.3	2.9	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
Vps51	PF08700.6	gi|15920634|ref|NP_376303.1|	-	1.3	8.8	8.5	5.2	6.9	5.4	2.0	1	1	0	1	1	1	0	Vps51/Vps67
DNA_topoisoIV	PF00521.15	gi|15920634|ref|NP_376303.1|	-	1.7	7.3	8.5	2.6	6.8	0.7	1.9	1	1	1	2	2	2	0	DNA	gyrase/topoisomerase	IV,	subunit	A
KxDL	PF10241.4	gi|15920634|ref|NP_376303.1|	-	1.9	8.4	5.8	4.7	7.1	4.0	1.6	1	1	0	1	1	1	0	Uncharacterized	conserved	protein
DUF1319	PF07028.6	gi|15920634|ref|NP_376303.1|	-	3.1	8.0	10.9	3.1	8.0	2.3	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1319)
Med4	PF10018.4	gi|15920634|ref|NP_376303.1|	-	3.9	6.8	8.0	4.6	6.6	5.5	1.1	1	0	0	1	1	1	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
Ribosomal_S3_C	PF00189.15	gi|15920635|ref|NP_376304.1|	-	1.6e-15	57.0	0.2	3.9e-15	55.8	0.1	1.6	1	0	0	1	1	1	1	Ribosomal	protein	S3,	C-terminal	domain
KH_2	PF07650.12	gi|15920635|ref|NP_376304.1|	-	3.4e-15	55.3	0.0	7e-15	54.3	0.0	1.5	1	0	0	1	1	1	1	KH	domain
KH_3	PF13014.1	gi|15920635|ref|NP_376304.1|	-	0.003	17.1	0.8	0.019	14.6	0.2	2.5	2	0	0	2	2	2	1	KH	domain
KH_1	PF00013.24	gi|15920635|ref|NP_376304.1|	-	0.017	14.7	2.4	0.023	14.3	0.2	2.4	3	0	0	3	3	3	0	KH	domain
KH_4	PF13083.1	gi|15920635|ref|NP_376304.1|	-	0.031	13.8	0.1	0.063	12.9	0.0	1.6	1	0	0	1	1	1	0	KH	domain
Ribosomal_L22	PF00237.14	gi|15920636|ref|NP_376305.1|	-	1.3e-34	118.3	0.5	1.5e-34	118.1	0.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L22p/L17e
Cytokin-bind	PF09265.5	gi|15920636|ref|NP_376305.1|	-	0.039	13.0	0.1	0.068	12.3	0.1	1.5	1	1	1	2	2	2	0	Cytokinin	dehydrogenase	1,	FAD	and	cytokinin	binding
Ribosomal_S19	PF00203.16	gi|15920637|ref|NP_376306.1|	-	4e-27	93.6	1.1	5.4e-27	93.2	0.8	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S19
Ribosomal_L2_C	PF03947.13	gi|161751097|ref|NP_376307.2|	-	2.1e-42	144.0	4.4	4.3e-42	142.9	2.6	1.7	2	0	0	2	2	2	1	Ribosomal	Proteins	L2,	C-terminal	domain
Ribosomal_L2	PF00181.18	gi|161751097|ref|NP_376307.2|	-	2.9e-13	49.5	0.1	7.8e-13	48.1	0.0	1.8	1	0	0	1	1	1	1	Ribosomal	Proteins	L2,	RNA	binding	domain
PRC	PF05239.11	gi|161751097|ref|NP_376307.2|	-	0.0013	18.5	0.9	0.0026	17.5	0.1	1.9	2	0	0	2	2	2	1	PRC-barrel	domain
Ribosomal_L23	PF00276.15	gi|15920639|ref|NP_376308.1|	-	1.8e-15	56.6	8.0	3.6e-15	55.6	5.5	1.5	1	1	0	1	1	1	1	Ribosomal	protein	L23
TusA	PF01206.12	gi|15920639|ref|NP_376308.1|	-	0.00044	19.8	1.0	0.00097	18.6	0.3	1.7	2	0	0	2	2	2	1	Sulfurtransferase	TusA
ASL_C	PF08328.6	gi|15920639|ref|NP_376308.1|	-	0.023	14.5	0.5	0.026	14.3	0.4	1.1	1	0	0	1	1	1	0	Adenylosuccinate	lyase	C-terminal
Lumazine_bd	PF12870.2	gi|15920639|ref|NP_376308.1|	-	0.056	13.4	3.3	0.069	13.1	2.3	1.1	1	0	0	1	1	1	0	Lumazine-binding	domain
DUF2551	PF10826.3	gi|15920639|ref|NP_376308.1|	-	0.074	12.9	0.7	0.11	12.3	0.2	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2551)
USP7_C2	PF14533.1	gi|15920639|ref|NP_376308.1|	-	0.08	12.3	1.1	0.09	12.1	0.8	1.1	1	0	0	1	1	1	0	Ubiquitin-specific	protease	C-terminal
7TMR-HDED	PF07697.6	gi|15920639|ref|NP_376308.1|	-	0.085	12.5	2.4	0.095	12.4	1.7	1.1	1	0	0	1	1	1	0	7TM-HD	extracellular
TFX_C	PF14601.1	gi|15920639|ref|NP_376308.1|	-	0.1	12.4	1.5	0.14	11.9	1.0	1.2	1	0	0	1	1	1	0	DNA_binding	protein,	TFX,	C-term
Ribosomal_L6	PF00347.18	gi|15920639|ref|NP_376308.1|	-	0.12	12.8	2.0	0.19	12.2	1.3	1.4	1	1	1	2	2	2	0	Ribosomal	protein	L6
Ribosomal_L4	PF00573.17	gi|15920640|ref|NP_376309.1|	-	5.7e-39	133.4	0.1	6.8e-39	133.2	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L4/L1	family
Ribosomal_L3	PF00297.17	gi|15920641|ref|NP_376310.1|	-	2e-61	207.6	0.0	2.4e-61	207.4	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L3
Methyltrn_RNA_3	PF02598.12	gi|15920642|ref|NP_376311.1|	-	4.1e-25	88.7	0.5	7.3e-24	84.6	0.4	2.3	1	1	0	1	1	1	1	Putative	RNA	methyltransferase
tRNA-synt_1	PF00133.17	gi|161751096|ref|NP_376312.2|	-	2.8e-187	623.4	1.2	3.7e-187	623.0	0.8	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|161751096|ref|NP_376312.2|	-	2.1e-32	112.0	0.6	2.1e-32	112.0	0.4	1.9	2	0	0	2	2	2	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.6	gi|161751096|ref|NP_376312.2|	-	2.5e-22	79.1	0.7	1.4e-07	30.5	0.0	4.4	3	1	0	3	3	3	3	tRNA	synthetases	class	I	(M)
tRNA-synt_1_2	PF13603.1	gi|161751096|ref|NP_376312.2|	-	3e-05	23.4	0.2	0.00028	20.2	0.0	2.4	2	0	0	2	2	2	1	Leucyl-tRNA	synthetase,	Domain	2
Rpr2	PF04032.11	gi|161751096|ref|NP_376312.2|	-	0.00033	20.4	2.4	0.0021	17.9	0.3	3.0	3	0	0	3	3	3	1	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
Nse4-Nse3_bdg	PF15412.1	gi|161751096|ref|NP_376312.2|	-	0.063	13.1	0.3	0.29	11.0	0.0	2.2	2	0	0	2	2	2	0	Binding	domain	of	Nse4/EID3	to	Nse3-MAGE
APG12	PF04110.8	gi|161751096|ref|NP_376312.2|	-	0.066	13.4	0.4	0.55	10.4	0.0	2.5	2	0	0	2	2	2	0	Ubiquitin-like	autophagy	protein	Apg12
Iso_dh	PF00180.15	gi|15920644|ref|NP_376313.1|	-	7.6e-92	307.9	0.6	9e-92	307.6	0.4	1.0	1	0	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
PdxA	PF04166.7	gi|15920644|ref|NP_376313.1|	-	0.1	11.7	0.0	0.21	10.7	0.0	1.5	1	0	0	1	1	1	0	Pyridoxal	phosphate	biosynthetic	protein	PdxA
DUF447	PF04289.7	gi|15920645|ref|NP_376314.1|	-	1.1e-37	129.3	0.0	1.3e-37	129.1	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF447)
Peptidase_M28	PF04389.12	gi|15920646|ref|NP_376315.1|	-	1.1e-05	25.3	0.2	0.0006	19.6	0.2	2.4	1	1	0	1	1	1	1	Peptidase	family	M28
HAD_2	PF13419.1	gi|15920647|ref|NP_376316.1|	-	2.6e-23	83.1	0.0	3.4e-23	82.7	0.0	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|15920647|ref|NP_376316.1|	-	4.2e-12	46.9	0.0	1.4e-11	45.2	0.0	1.8	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|15920647|ref|NP_376316.1|	-	3.2e-10	39.5	0.0	6.1e-10	38.6	0.0	1.4	1	0	0	1	1	1	1	HAD-hyrolase-like
HAD	PF12710.2	gi|15920647|ref|NP_376316.1|	-	2.8e-06	27.6	0.2	4.2e-06	27.0	0.1	1.3	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_6	PF13344.1	gi|15920647|ref|NP_376316.1|	-	0.09	12.6	0.0	1.1	9.2	0.0	2.3	2	0	0	2	2	2	0	Haloacid	dehalogenase-like	hydrolase
Acid_phosphat_B	PF03767.9	gi|15920647|ref|NP_376316.1|	-	0.2	10.9	1.3	11	5.2	0.0	2.2	2	0	0	2	2	2	0	HAD	superfamily,	subfamily	IIIB	(Acid	phosphatase)
GTP_EFTU	PF00009.22	gi|15920648|ref|NP_376317.1|	-	8.9e-59	198.0	0.2	1.4e-58	197.4	0.2	1.3	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
EFG_IV	PF03764.13	gi|15920648|ref|NP_376317.1|	-	1e-32	112.2	0.1	5.4e-32	109.8	0.0	2.3	2	0	0	2	2	2	1	Elongation	factor	G,	domain	IV
EFG_II	PF14492.1	gi|15920648|ref|NP_376317.1|	-	1.6e-23	82.3	0.0	4.3e-23	80.9	0.0	1.8	1	0	0	1	1	1	1	Elongation	Factor	G,	domain	II
EFG_C	PF00679.19	gi|15920648|ref|NP_376317.1|	-	2.1e-22	78.7	0.0	6.9e-22	77.1	0.0	2.0	1	0	0	1	1	1	1	Elongation	factor	G	C-terminus
GTP_EFTU_D2	PF03144.20	gi|15920648|ref|NP_376317.1|	-	6.4e-13	48.6	0.3	2.9e-12	46.5	0.0	2.4	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.18	gi|15920648|ref|NP_376317.1|	-	0.00041	20.2	0.1	0.00098	19.0	0.1	1.6	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
Pyr_redox_2	PF07992.9	gi|15920649|ref|NP_376318.1|	-	1.7e-33	116.1	0.8	2.7e-33	115.5	0.6	1.5	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|15920649|ref|NP_376318.1|	-	4.9e-11	43.0	0.0	4.4e-08	33.4	0.0	2.2	1	1	1	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|15920649|ref|NP_376318.1|	-	8e-10	38.1	0.7	8.3e-06	24.9	0.2	2.5	3	0	0	3	3	3	2	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|15920649|ref|NP_376318.1|	-	3.1e-09	36.1	3.1	2.3e-06	26.7	0.2	3.2	2	1	1	3	3	3	2	FAD	binding	domain
Thi4	PF01946.12	gi|15920649|ref|NP_376318.1|	-	8.5e-08	31.5	0.8	3.4e-05	23.0	0.0	2.5	2	1	0	2	2	2	2	Thi4	family
GIDA	PF01134.17	gi|15920649|ref|NP_376318.1|	-	3.9e-06	25.9	3.3	0.00054	18.9	0.0	2.9	2	1	1	3	3	3	2	Glucose	inhibited	division	protein	A
Pyr_redox	PF00070.22	gi|15920649|ref|NP_376318.1|	-	8.4e-06	26.1	2.2	0.009	16.3	0.1	3.1	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_oxidored	PF12831.2	gi|15920649|ref|NP_376318.1|	-	1.6e-05	24.1	0.1	0.00043	19.4	0.0	2.1	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|15920649|ref|NP_376318.1|	-	7.9e-05	22.6	0.2	0.00021	21.2	0.1	1.7	1	1	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.9	gi|15920649|ref|NP_376318.1|	-	0.0023	16.4	0.0	0.033	12.6	0.1	2.2	2	0	0	2	2	2	1	HI0933-like	protein
FAD_binding_3	PF01494.14	gi|15920649|ref|NP_376318.1|	-	0.0025	16.9	0.0	0.0036	16.4	0.0	1.3	1	0	0	1	1	1	1	FAD	binding	domain
K_oxygenase	PF13434.1	gi|15920649|ref|NP_376318.1|	-	0.0056	15.6	0.0	2.6	6.8	0.0	3.0	2	1	1	3	3	3	1	L-lysine	6-monooxygenase	(NADPH-requiring)
Lycopene_cycl	PF05834.7	gi|15920649|ref|NP_376318.1|	-	0.021	13.7	0.1	0.034	13.0	0.1	1.3	1	0	0	1	1	1	0	Lycopene	cyclase	protein
FMO-like	PF00743.14	gi|15920649|ref|NP_376318.1|	-	0.16	10.1	1.3	8	4.5	0.0	2.7	2	1	1	3	3	3	0	Flavin-binding	monooxygenase-like
ERCC4	PF02732.10	gi|15920650|ref|NP_376319.1|	-	2.5e-28	98.6	0.2	4.4e-28	97.8	0.1	1.4	1	0	0	1	1	1	1	ERCC4	domain
HHH_2	PF12826.2	gi|15920650|ref|NP_376319.1|	-	3.2e-06	26.9	0.0	1.1e-05	25.1	0.0	1.9	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
HHH_5	PF14520.1	gi|15920650|ref|NP_376319.1|	-	0.00043	20.3	0.0	0.0014	18.7	0.0	1.9	2	0	0	2	2	2	1	Helix-hairpin-helix	domain
5_3_exonuc	PF01367.15	gi|15920650|ref|NP_376319.1|	-	0.0011	19.1	0.9	0.0029	17.8	0.0	2.1	2	0	0	2	2	2	1	5'-3'	exonuclease,	C-terminal	SAM	fold
Z1	PF10593.4	gi|15920650|ref|NP_376319.1|	-	0.018	14.2	2.6	0.027	13.6	0.3	1.9	2	0	0	2	2	2	0	Z1	domain
Prefoldin_2	PF01920.15	gi|15920651|ref|NP_376320.1|	-	1.4e-23	82.6	17.1	1.6e-23	82.4	11.9	1.0	1	0	0	1	1	1	1	Prefoldin	subunit
Methyltransf_27	PF13708.1	gi|15920651|ref|NP_376320.1|	-	0.009	15.5	0.1	0.016	14.7	0.1	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
UPF0449	PF15136.1	gi|15920651|ref|NP_376320.1|	-	0.017	15.3	1.2	0.017	15.3	0.8	1.8	1	1	1	2	2	2	0	Uncharacterised	protein	family	UPF0449
UBN2	PF14223.1	gi|15920651|ref|NP_376320.1|	-	0.028	14.2	6.3	0.1	12.3	0.6	2.1	1	1	1	2	2	2	0	gag-polypeptide	of	LTR	copia-type
Snf7	PF03357.16	gi|15920651|ref|NP_376320.1|	-	0.039	13.3	6.7	0.57	9.5	0.1	2.1	2	0	0	2	2	2	0	Snf7
DUF424	PF04242.8	gi|15920651|ref|NP_376320.1|	-	0.043	13.8	0.1	0.093	12.7	0.0	1.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF424)
CCDC144C	PF14915.1	gi|15920651|ref|NP_376320.1|	-	0.044	12.6	14.0	0.28	10.0	9.7	1.8	1	1	0	1	1	1	0	CCDC144C	protein	coiled-coil	region
Peptidase_C6	PF00851.13	gi|15920651|ref|NP_376320.1|	-	0.058	12.0	1.7	0.067	11.8	1.2	1.0	1	0	0	1	1	1	0	Helper	component	proteinase
WXG100	PF06013.7	gi|15920651|ref|NP_376320.1|	-	0.1	12.6	2.6	2.1	8.3	0.0	2.8	2	1	0	2	2	2	0	Proteins	of	100	residues	with	WXG
BBS2_C	PF14782.1	gi|15920651|ref|NP_376320.1|	-	0.11	10.9	0.2	0.11	10.9	0.1	2.1	1	1	1	2	2	2	0	Ciliary	BBSome	complex	subunit	2,	C-terminal
SbcD_C	PF12320.3	gi|15920651|ref|NP_376320.1|	-	0.15	12.1	5.4	0.16	12.0	0.5	2.2	2	0	0	2	2	2	0	Type	5	capsule	protein	repressor	C-terminal	domain
MerR-DNA-bind	PF09278.6	gi|15920651|ref|NP_376320.1|	-	0.16	12.3	12.6	0.52	10.7	2.1	2.9	3	0	0	3	3	3	0	MerR,	DNA	binding
Gon7	PF08738.5	gi|15920651|ref|NP_376320.1|	-	0.17	11.8	13.9	1.1	9.2	1.8	2.5	1	1	0	2	2	2	0	Gon7	family
ACCA	PF03255.9	gi|15920651|ref|NP_376320.1|	-	1.1	8.7	5.3	1.7	8.2	0.9	2.1	2	0	0	2	2	2	0	Acetyl	co-enzyme	A	carboxylase	carboxyltransferase	alpha	subunit
Prefoldin	PF02996.12	gi|15920651|ref|NP_376320.1|	-	1.4	8.6	11.9	4.8	6.8	1.4	2.3	1	1	1	2	2	2	0	Prefoldin	subunit
DUF2408	PF10303.4	gi|15920651|ref|NP_376320.1|	-	1.5	8.9	11.0	2.2	8.4	1.0	2.1	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2408)
TPR_MLP1_2	PF07926.7	gi|15920651|ref|NP_376320.1|	-	1.5	8.5	12.3	2.6	7.8	3.9	2.2	2	0	0	2	2	2	0	TPR/MLP1/MLP2-like	protein
FliD_C	PF07195.7	gi|15920651|ref|NP_376320.1|	-	2.3	7.4	8.8	0.59	9.3	2.4	2.0	1	1	1	2	2	2	0	Flagellar	hook-associated	protein	2	C-terminus
Spc7	PF08317.6	gi|15920651|ref|NP_376320.1|	-	2.8	6.5	12.3	3.5	6.2	8.5	1.1	1	0	0	1	1	1	0	Spc7	kinetochore	protein
DUF4355	PF14265.1	gi|15920651|ref|NP_376320.1|	-	2.9	7.8	11.0	1.3	9.0	4.8	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4355)
Baculo_PEP_C	PF04513.7	gi|15920651|ref|NP_376320.1|	-	3.6	7.4	12.7	12	5.6	4.3	2.2	1	1	1	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
DUF972	PF06156.8	gi|15920651|ref|NP_376320.1|	-	3.7	7.9	10.0	86	3.5	6.9	2.1	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF972)
Nup54	PF13874.1	gi|15920651|ref|NP_376320.1|	-	4.4	6.9	9.5	26	4.4	6.2	2.1	1	1	0	1	1	1	0	Nucleoporin	complex	subunit	54
Laminin_II	PF06009.7	gi|15920651|ref|NP_376320.1|	-	4.5	7.0	9.7	6.7	6.4	0.7	2.1	1	1	1	2	2	2	0	Laminin	Domain	II
DUF4140	PF13600.1	gi|15920651|ref|NP_376320.1|	-	5.6	7.4	9.8	4.4	7.8	0.7	2.2	1	1	0	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
Syntaxin-6_N	PF09177.6	gi|15920651|ref|NP_376320.1|	-	5.6	7.4	10.2	13	6.2	0.8	2.3	1	1	1	2	2	2	0	Syntaxin	6,	N-terminal
Spc24	PF08286.6	gi|15920651|ref|NP_376320.1|	-	5.9	6.6	12.9	6.8	6.4	3.3	2.2	1	1	1	2	2	2	0	Spc24	subunit	of	Ndc80
APG6	PF04111.7	gi|15920651|ref|NP_376320.1|	-	6	5.8	11.4	8.6	5.2	7.9	1.2	1	1	0	1	1	1	0	Autophagy	protein	Apg6
Zein-binding	PF04576.10	gi|15920651|ref|NP_376320.1|	-	6.4	6.9	7.7	4.2	7.5	0.4	2.1	1	1	1	2	2	2	0	Zein-binding
DUF3186	PF11382.3	gi|15920651|ref|NP_376320.1|	-	9.4	5.2	8.1	4.9	6.1	0.9	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3186)
Pcc1	PF09341.5	gi|297616203|ref|YP_003710343.1|	-	0.022	14.8	0.0	0.04	13.9	0.0	1.5	1	1	0	1	1	1	0	Transcription	factor	Pcc1
Brix	PF04427.13	gi|15920652|ref|NP_376321.1|	-	2e-14	53.7	0.6	2.4e-14	53.4	0.4	1.1	1	0	0	1	1	1	1	Brix	domain
Ribosomal_L37ae	PF01780.14	gi|15920653|ref|NP_376322.1|	-	1.1e-24	86.1	7.8	1.1e-24	86.0	5.4	1.0	1	0	0	1	1	1	1	Ribosomal	L37ae	protein	family
Zn_Tnp_IS1595	PF12760.2	gi|15920653|ref|NP_376322.1|	-	0.00012	21.8	4.1	0.00017	21.3	2.9	1.3	1	1	0	1	1	1	1	Transposase	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|15920653|ref|NP_376322.1|	-	0.0011	18.5	1.0	0.0014	18.2	0.7	1.2	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
RRN7	PF11781.3	gi|15920653|ref|NP_376322.1|	-	0.0015	17.9	1.1	0.0025	17.2	0.7	1.4	1	0	0	1	1	1	1	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
TF_Zn_Ribbon	PF08271.7	gi|15920653|ref|NP_376322.1|	-	0.0031	16.8	0.1	0.0044	16.2	0.0	1.2	1	0	0	1	1	1	1	TFIIB	zinc-binding
DUF1610	PF07754.6	gi|15920653|ref|NP_376322.1|	-	0.0099	15.9	1.3	2.3	8.4	0.0	2.5	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1610)
Rep_fac-A_C	PF08646.5	gi|15920653|ref|NP_376322.1|	-	0.011	15.4	2.6	0.013	15.1	1.8	1.1	1	0	0	1	1	1	0	Replication	factor-A	C	terminal	domain
Endonuclease_7	PF02945.10	gi|15920653|ref|NP_376322.1|	-	0.013	15.1	0.8	0.017	14.7	0.5	1.3	1	1	0	1	1	1	0	Recombination	endonuclease	VII
zf-C3HC4_2	PF13923.1	gi|15920653|ref|NP_376322.1|	-	0.021	14.8	2.0	0.25	11.4	1.3	2.0	1	1	1	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
CpXC	PF14353.1	gi|15920653|ref|NP_376322.1|	-	0.057	13.3	2.0	0.13	12.2	0.1	1.9	1	1	0	2	2	2	0	CpXC	protein
DUF4428	PF14471.1	gi|15920653|ref|NP_376322.1|	-	0.066	12.9	0.4	0.1	12.3	0.3	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4428)
zf-TFIIB	PF13453.1	gi|15920653|ref|NP_376322.1|	-	0.066	12.4	1.9	0.12	11.5	1.3	1.5	1	1	0	1	1	1	0	Transcription	factor	zinc-finger
DZR	PF12773.2	gi|15920653|ref|NP_376322.1|	-	0.11	12.3	2.1	0.65	9.8	1.2	1.7	1	1	1	2	2	2	0	Double	zinc	ribbon
Prim_Zn_Ribbon	PF08273.7	gi|15920653|ref|NP_376322.1|	-	0.12	12.4	4.6	0.31	11.1	3.2	1.7	1	1	0	1	1	1	0	Zinc-binding	domain	of	primase-helicase
HypA	PF01155.14	gi|15920653|ref|NP_376322.1|	-	0.13	11.9	0.2	0.16	11.6	0.1	1.2	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zf-RING_2	PF13639.1	gi|15920653|ref|NP_376322.1|	-	0.14	12.0	1.9	0.93	9.3	1.5	1.9	1	1	1	2	2	2	0	Ring	finger	domain
DUF4379	PF14311.1	gi|15920653|ref|NP_376322.1|	-	0.15	11.9	8.7	1.2	9.0	0.4	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4379)
Zn-ribbon_8	PF09723.5	gi|15920653|ref|NP_376322.1|	-	0.28	11.1	2.8	3.7	7.5	0.4	2.3	2	1	0	2	2	2	0	Zinc	ribbon	domain
zf-H2C2_2	PF13465.1	gi|15920653|ref|NP_376322.1|	-	0.31	11.4	2.7	2.1	8.7	0.1	2.2	2	0	0	2	2	2	0	Zinc-finger	double	domain
DnaJ_CXXCXGXG	PF00684.14	gi|15920653|ref|NP_376322.1|	-	0.36	10.8	3.2	0.63	10.1	2.2	1.4	1	1	0	1	1	1	0	DnaJ	central	domain
zf-C3HC4_3	PF13920.1	gi|15920653|ref|NP_376322.1|	-	0.71	9.5	4.2	1	9.1	0.4	2.0	1	1	1	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
zinc_ribbon_4	PF13717.1	gi|15920653|ref|NP_376322.1|	-	0.85	9.3	4.3	12	5.7	0.5	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|15920653|ref|NP_376322.1|	-	1.1	8.8	5.3	23	4.6	0.4	2.2	1	1	1	2	2	2	0	zinc-ribbon	domain
Rubredoxin	PF00301.15	gi|15920653|ref|NP_376322.1|	-	1.1	9.1	4.3	3.5	7.5	0.1	2.2	2	0	0	2	2	2	0	Rubredoxin
DUF3797	PF12677.2	gi|15920653|ref|NP_376322.1|	-	1.3	8.6	4.0	14	5.4	0.5	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3797)
TFIIS_C	PF01096.13	gi|15920653|ref|NP_376322.1|	-	2.1	8.0	6.8	14	5.4	1.5	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
PHD	PF00628.24	gi|15920653|ref|NP_376322.1|	-	2.5	7.8	6.2	2.5	7.8	0.4	2.1	1	1	1	2	2	2	0	PHD-finger
zinc_ribbon_2	PF13240.1	gi|15920653|ref|NP_376322.1|	-	8.9	5.9	7.0	4.4	6.9	1.4	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
RNase_PH	PF01138.16	gi|15920654|ref|NP_376323.1|	-	6.7e-31	107.3	0.0	1.6e-30	106.0	0.0	1.6	2	0	0	2	2	2	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.10	gi|15920654|ref|NP_376323.1|	-	2.3e-10	40.2	0.2	7.1e-10	38.6	0.0	2.0	2	0	0	2	2	2	1	3'	exoribonuclease	family,	domain	2
RNase_PH	PF01138.16	gi|15920655|ref|NP_376324.1|	-	7.7e-36	123.3	0.0	1e-35	122.9	0.0	1.1	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.10	gi|15920655|ref|NP_376324.1|	-	4.4e-14	52.1	0.0	7.8e-14	51.3	0.0	1.4	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	2
KH_1	PF00013.24	gi|15920656|ref|NP_376325.1|	-	6.4e-08	32.1	0.3	1.4e-07	31.0	0.2	1.7	1	1	0	1	1	1	1	KH	domain
S1	PF00575.18	gi|15920656|ref|NP_376325.1|	-	1.9e-05	24.6	0.0	4.2e-05	23.5	0.0	1.6	1	0	0	1	1	1	1	S1	RNA	binding	domain
KH_3	PF13014.1	gi|15920656|ref|NP_376325.1|	-	0.00071	19.1	0.2	0.0038	16.8	0.0	2.4	2	0	0	2	2	2	1	KH	domain
SBDS	PF01172.13	gi|15920657|ref|NP_376326.1|	-	8.4e-31	105.6	1.1	1.8e-30	104.5	0.8	1.6	1	0	0	1	1	1	1	Shwachman-Bodian-Diamond	syndrome	(SBDS)	protein
SBDS_C	PF09377.5	gi|15920657|ref|NP_376326.1|	-	2.7e-21	75.5	2.8	4.7e-21	74.7	1.9	1.4	1	0	0	1	1	1	1	SBDS	protein	C-terminal	domain
EFG_C	PF00679.19	gi|15920657|ref|NP_376326.1|	-	0.069	13.0	0.0	0.18	11.6	0.0	1.6	1	0	0	1	1	1	0	Elongation	factor	G	C-terminus
Proteasome	PF00227.21	gi|15920658|ref|NP_376327.1|	-	1.7e-58	197.0	0.0	2.4e-58	196.5	0.0	1.2	1	0	0	1	1	1	1	Proteasome	subunit
Proteasome_A_N	PF10584.4	gi|15920658|ref|NP_376327.1|	-	4.7e-13	48.2	0.9	1.1e-12	47.0	0.3	1.9	2	0	0	2	2	2	1	Proteasome	subunit	A	N-terminal	signature
RNase_P_Rpp14	PF01900.14	gi|15920659|ref|NP_376328.1|	-	2.5e-18	65.9	0.2	4.1e-18	65.2	0.1	1.3	1	0	0	1	1	1	1	Rpp14/Pop5	family
RNase_P_p30	PF01876.11	gi|15920660|ref|NP_376329.1|	-	2.5e-12	46.2	0.3	1e-11	44.3	0.2	1.7	1	1	0	1	1	1	1	RNase	P	subunit	p30
DUF1938	PF09153.5	gi|15920660|ref|NP_376329.1|	-	0.073	12.8	0.2	0.18	11.6	0.2	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1938)
RNA_binding	PF01877.12	gi|15920661|ref|NP_376330.1|	-	2.3e-29	101.8	1.0	3e-29	101.4	0.7	1.2	1	0	0	1	1	1	1	RNA	binding
YueH	PF14166.1	gi|15920661|ref|NP_376330.1|	-	0.064	13.0	0.1	0.25	11.1	0.0	2.0	2	1	0	2	2	2	0	YueH-like	protein
Ribosomal_L15e	PF00827.12	gi|15920662|ref|NP_376331.1|	-	2.6e-75	252.1	6.5	2.6e-75	252.1	4.5	1.5	1	1	1	2	2	2	1	Ribosomal	L15
MMR_HSR1_C	PF08438.5	gi|15920663|ref|NP_376332.1|	-	1e-37	128.6	0.2	1.7e-37	127.9	0.1	1.4	1	0	0	1	1	1	1	GTPase	of	unknown	function	C-terminal
MMR_HSR1	PF01926.18	gi|15920663|ref|NP_376332.1|	-	2.3e-17	63.0	0.0	1.3e-16	60.5	0.0	2.2	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
TGS	PF02824.16	gi|15920663|ref|NP_376332.1|	-	8.1e-12	44.7	0.0	1.7e-11	43.7	0.0	1.5	1	0	0	1	1	1	1	TGS	domain
FeoB_N	PF02421.13	gi|15920663|ref|NP_376332.1|	-	2.8e-07	29.9	0.1	4.3e-05	22.8	0.0	2.9	3	0	0	3	3	3	1	Ferrous	iron	transport	protein	B
YchF-GTPase_C	PF06071.8	gi|15920663|ref|NP_376332.1|	-	0.00055	19.6	0.3	0.33	10.7	0.0	2.5	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF933)
T2SE	PF00437.15	gi|15920663|ref|NP_376332.1|	-	0.031	13.1	0.1	1.3	7.8	0.0	2.3	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
Miro	PF08477.8	gi|15920663|ref|NP_376332.1|	-	0.038	14.4	0.0	0.97	9.9	0.0	2.7	2	0	0	2	2	2	0	Miro-like	protein
Latarcin	PF10279.4	gi|15920663|ref|NP_376332.1|	-	0.06	13.5	0.1	0.15	12.2	0.1	1.7	1	0	0	1	1	1	0	Latarcin	precursor
AAA_29	PF13555.1	gi|15920663|ref|NP_376332.1|	-	0.065	12.7	0.1	0.18	11.3	0.0	1.7	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
GTP_EFTU	PF00009.22	gi|15920663|ref|NP_376332.1|	-	0.1	11.9	0.3	8.3	5.7	0.0	2.8	3	0	0	3	3	3	0	Elongation	factor	Tu	GTP	binding	domain
NTP_transferase	PF00483.18	gi|15920664|ref|NP_376333.1|	-	6.8e-36	123.8	0.0	8.8e-36	123.4	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
Hexapep	PF00132.19	gi|15920664|ref|NP_376333.1|	-	7.5e-20	69.4	14.2	2.3e-07	29.9	1.6	4.8	3	1	3	6	6	6	5	Bacterial	transferase	hexapeptide	(six	repeats)
NTP_transf_3	PF12804.2	gi|15920664|ref|NP_376333.1|	-	2.5e-11	43.8	0.0	3.5e-11	43.4	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep_2	PF14602.1	gi|15920664|ref|NP_376333.1|	-	1.3e-05	24.6	3.9	0.047	13.2	0.0	3.9	3	1	1	4	4	4	2	Hexapeptide	repeat	of	succinyl-transferase
IspD	PF01128.14	gi|15920664|ref|NP_376333.1|	-	6.8e-05	22.4	0.0	0.0001	21.9	0.0	1.3	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
CTP_transf_3	PF02348.14	gi|15920664|ref|NP_376333.1|	-	0.011	15.3	0.1	0.015	14.9	0.1	1.3	1	0	0	1	1	1	0	Cytidylyltransferase
Ribosomal_S3Ae	PF01015.13	gi|15920665|ref|NP_376334.1|	-	5e-75	251.1	1.7	5.5e-75	250.9	1.1	1.0	1	0	0	1	1	1	1	Ribosomal	S3Ae	family
DUF4348	PF14254.1	gi|15920665|ref|NP_376334.1|	-	0.027	13.5	0.0	0.045	12.8	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4348)
SpoU_methylase	PF00588.14	gi|15920666|ref|NP_376335.1|	-	6.6e-31	107.0	0.0	8.5e-31	106.7	0.0	1.1	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
Methyltrn_RNA_4	PF09936.4	gi|15920666|ref|NP_376335.1|	-	7.6e-05	22.2	0.0	0.0019	17.6	0.0	2.1	1	1	0	1	1	1	1	SAM-dependent	RNA	methyltransferase
Methyltransf_26	PF13659.1	gi|15920667|ref|NP_376336.1|	-	1.7e-12	47.4	0.0	2.1e-12	47.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|15920667|ref|NP_376336.1|	-	9.1e-12	44.6	0.0	1.2e-11	44.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
PrmA	PF06325.8	gi|15920667|ref|NP_376336.1|	-	5.9e-08	32.1	0.0	1.1e-07	31.3	0.0	1.4	2	0	0	2	2	2	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_31	PF13847.1	gi|15920667|ref|NP_376336.1|	-	1.4e-07	31.1	0.0	1.9e-07	30.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|15920667|ref|NP_376336.1|	-	3.4e-05	23.2	0.0	7e-05	22.2	0.0	1.4	2	0	0	2	2	2	1	Conserved	hypothetical	protein	95
Methyltransf_18	PF12847.2	gi|15920667|ref|NP_376336.1|	-	0.00096	19.7	0.0	0.0013	19.2	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|15920667|ref|NP_376336.1|	-	0.0025	17.5	0.0	0.0032	17.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|15920667|ref|NP_376336.1|	-	0.0031	17.0	0.0	0.0089	15.5	0.0	1.7	2	0	0	2	2	2	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
RrnaAD	PF00398.15	gi|15920667|ref|NP_376336.1|	-	0.037	13.0	0.0	0.069	12.1	0.0	1.4	2	0	0	2	2	2	0	Ribosomal	RNA	adenine	dimethylase
Methyltransf_25	PF13649.1	gi|15920667|ref|NP_376336.1|	-	0.078	13.3	0.0	0.12	12.7	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_16	PF10294.4	gi|15920667|ref|NP_376336.1|	-	0.089	12.2	0.1	0.15	11.5	0.1	1.3	1	0	0	1	1	1	0	Putative	methyltransferase
RrnaAD	PF00398.15	gi|15920668|ref|NP_376337.1|	-	1.1e-20	73.8	0.1	1.9e-19	69.6	0.1	2.1	1	1	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Glucan_synthase	PF02364.10	gi|15920668|ref|NP_376337.1|	-	0.022	12.6	0.4	0.027	12.3	0.3	1.0	1	0	0	1	1	1	0	1,3-beta-glucan	synthase	component
DUF655	PF04919.7	gi|15920669|ref|NP_376338.1|	-	5.5e-60	202.1	2.9	6.5e-60	201.9	2.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF655)
HHH_6	PF14579.1	gi|15920669|ref|NP_376338.1|	-	0.0035	17.3	0.0	0.007	16.3	0.0	1.7	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
RNA_pol_Rpb4	PF03874.11	gi|15920670|ref|NP_376339.1|	-	4.1e-12	46.1	1.5	4.7e-12	45.9	1.0	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb4
DDE_3	PF13358.1	gi|15920670|ref|NP_376339.1|	-	0.033	13.9	0.0	0.035	13.8	0.0	1.2	1	0	0	1	1	1	0	DDE	superfamily	endonuclease
Shikimate_DH	PF01488.15	gi|15920670|ref|NP_376339.1|	-	0.092	12.8	0.3	0.11	12.6	0.2	1.2	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
Ribosomal_L21e	PF01157.13	gi|15920671|ref|NP_376340.1|	-	1.2e-28	98.8	3.0	1.3e-28	98.6	2.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L21e
NHase_beta	PF02211.10	gi|15920671|ref|NP_376340.1|	-	0.11	12.2	0.2	0.11	12.1	0.1	1.0	1	0	0	1	1	1	0	Nitrile	hydratase	beta	subunit
PIG-U	PF06728.8	gi|15920672|ref|NP_376341.1|	-	0.056	12.2	4.1	0.053	12.3	2.8	1.0	1	0	0	1	1	1	0	GPI	transamidase	subunit	PIG-U
UPF0147	PF03685.8	gi|15920674|ref|NP_376343.1|	-	1.3e-39	133.9	2.8	1.5e-39	133.7	1.9	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0147)
UPF0253	PF06786.7	gi|15920674|ref|NP_376343.1|	-	0.0011	19.0	0.2	0.11	12.5	0.1	2.2	1	1	1	2	2	2	2	Uncharacterised	protein	family	(UPF0253)
HEAT_2	PF13646.1	gi|15920674|ref|NP_376343.1|	-	0.12	12.6	0.3	0.26	11.5	0.2	1.7	1	1	0	1	1	1	0	HEAT	repeats
PRRSV_2b	PF07069.6	gi|15920675|ref|NP_376344.1|	-	0.33	11.2	4.6	0.35	11.1	3.2	1.1	1	0	0	1	1	1	0	Porcine	reproductive	and	respiratory	syndrome	virus	2b
PDR_assoc	PF08370.6	gi|15920675|ref|NP_376344.1|	-	1.3	8.5	3.5	2.9	7.4	2.4	1.8	1	1	0	1	1	1	0	Plant	PDR	ABC	transporter	associated
Auto_anti-p27	PF06677.7	gi|15920676|ref|NP_376345.1|	-	5.4e-19	67.6	0.9	8.7e-19	67.0	0.6	1.3	1	0	0	1	1	1	1	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
FYDLN_acid	PF09538.5	gi|15920676|ref|NP_376345.1|	-	0.055	14.0	0.3	0.12	12.9	0.0	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(FYDLN_acid)
TF_Zn_Ribbon	PF08271.7	gi|15920676|ref|NP_376345.1|	-	0.11	11.8	0.2	0.24	10.7	0.1	1.7	1	0	0	1	1	1	0	TFIIB	zinc-binding
Thymidylate_kin	PF02223.12	gi|15920677|ref|NP_376346.1|	-	1.2e-43	148.6	0.4	1.4e-43	148.4	0.3	1.0	1	0	0	1	1	1	1	Thymidylate	kinase
AAA_28	PF13521.1	gi|15920677|ref|NP_376346.1|	-	3e-08	33.8	0.0	3.7e-08	33.4	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
MobB	PF03205.9	gi|15920677|ref|NP_376346.1|	-	0.00046	19.9	0.0	0.001	18.7	0.0	1.6	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
SRP54	PF00448.17	gi|15920677|ref|NP_376346.1|	-	0.00049	19.5	0.1	0.0017	17.8	0.0	1.8	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
SKI	PF01202.17	gi|15920677|ref|NP_376346.1|	-	0.00073	19.4	0.6	0.075	12.9	0.1	2.2	2	0	0	2	2	2	1	Shikimate	kinase
AAA_17	PF13207.1	gi|15920677|ref|NP_376346.1|	-	0.001	19.8	0.8	0.0058	17.4	0.6	2.1	1	1	0	1	1	1	1	AAA	domain
NTPase_1	PF03266.10	gi|15920677|ref|NP_376346.1|	-	0.0011	18.7	0.9	0.0021	17.7	0.0	2.0	2	1	0	2	2	2	1	NTPase
AAA_18	PF13238.1	gi|15920677|ref|NP_376346.1|	-	0.0019	18.5	1.2	0.0062	16.8	0.6	2.0	1	1	1	2	2	2	1	AAA	domain
AAA_33	PF13671.1	gi|15920677|ref|NP_376346.1|	-	0.0024	17.7	0.1	0.0055	16.5	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
APS_kinase	PF01583.15	gi|15920677|ref|NP_376346.1|	-	0.0038	16.8	0.0	0.0072	15.9	0.0	1.5	1	0	0	1	1	1	1	Adenylylsulphate	kinase
AAA_30	PF13604.1	gi|15920677|ref|NP_376346.1|	-	0.0046	16.5	0.0	0.0072	15.9	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
NACHT	PF05729.7	gi|15920677|ref|NP_376346.1|	-	0.01	15.4	0.2	0.036	13.7	0.0	1.9	2	1	0	2	2	2	0	NACHT	domain
PPK2	PF03976.9	gi|15920677|ref|NP_376346.1|	-	0.011	15.0	0.0	0.027	13.7	0.0	1.6	1	0	0	1	1	1	0	Polyphosphate	kinase	2	(PPK2)
dNK	PF01712.14	gi|15920677|ref|NP_376346.1|	-	0.017	15.0	0.6	0.026	14.4	0.4	1.4	1	1	0	1	1	1	0	Deoxynucleoside	kinase
NB-ARC	PF00931.17	gi|15920677|ref|NP_376346.1|	-	0.02	13.7	0.0	0.043	12.6	0.0	1.5	1	0	0	1	1	1	0	NB-ARC	domain
KdpD	PF02702.12	gi|15920677|ref|NP_376346.1|	-	0.027	13.6	0.2	0.18	10.8	0.0	2.1	1	1	1	2	2	2	0	Osmosensitive	K+	channel	His	kinase	sensor	domain
CbiA	PF01656.18	gi|15920677|ref|NP_376346.1|	-	0.036	13.4	3.5	0.24	10.7	2.4	1.9	1	1	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
KTI12	PF08433.5	gi|15920677|ref|NP_376346.1|	-	0.061	12.5	0.3	0.28	10.3	0.0	2.1	2	1	0	2	2	2	0	Chromatin	associated	protein	KTI12
AAA_14	PF13173.1	gi|15920677|ref|NP_376346.1|	-	0.069	13.0	3.9	0.33	10.8	0.1	2.4	1	1	1	2	2	2	0	AAA	domain
ATP_bind_1	PF03029.12	gi|15920677|ref|NP_376346.1|	-	0.074	12.5	0.3	0.16	11.4	0.0	1.6	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
AAA	PF00004.24	gi|15920677|ref|NP_376346.1|	-	0.077	13.1	0.6	0.18	11.9	0.4	1.9	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_24	PF13479.1	gi|15920677|ref|NP_376346.1|	-	0.1	12.2	1.6	5.2	6.5	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
ArgK	PF03308.11	gi|15920677|ref|NP_376346.1|	-	0.13	11.0	0.0	0.25	10.0	0.0	1.5	1	0	0	1	1	1	0	ArgK	protein
ABC_tran	PF00005.22	gi|15920677|ref|NP_376346.1|	-	0.15	12.3	0.1	0.21	11.8	0.0	1.6	1	1	0	1	1	1	0	ABC	transporter
Arch_ATPase	PF01637.13	gi|15920677|ref|NP_376346.1|	-	0.31	10.7	5.5	0.89	9.2	3.8	1.8	1	1	0	1	1	1	0	Archaeal	ATPase
MobB	PF03205.9	gi|15920678|ref|NP_376347.1|	-	0.083	12.5	0.0	0.65	9.6	0.0	2.2	1	1	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Clp1	PF06807.9	gi|15920678|ref|NP_376347.1|	-	0.092	12.4	0.0	0.31	10.7	0.0	1.9	2	0	0	2	2	2	0	Pre-mRNA	cleavage	complex	II	protein	Clp1
MinE	PF03776.9	gi|15920680|ref|NP_376349.1|	-	0.027	13.9	0.0	0.032	13.7	0.0	1.3	1	1	0	1	1	1	0	Septum	formation	topological	specificity	factor	MinE
DUF46	PF01864.12	gi|15920681|ref|NP_376350.1|	-	7.3e-40	136.6	10.7	2.7e-39	134.8	7.4	1.7	1	1	0	1	1	1	1	Putative	integral	membrane	protein	DUF46
CTP_transf_1	PF01148.15	gi|15920681|ref|NP_376350.1|	-	2.2e-05	24.2	2.8	2.2e-05	24.2	2.0	2.1	2	0	0	2	2	2	1	Cytidylyltransferase	family
Acyl_transf_3	PF01757.17	gi|15920682|ref|NP_376351.1|	-	0.015	14.1	8.8	0.016	14.0	6.1	1.1	1	0	0	1	1	1	0	Acyltransferase	family
DUF2644	PF10841.3	gi|15920682|ref|NP_376351.1|	-	0.06	13.3	1.6	0.34	10.9	1.1	2.2	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2644)
SH	PF01445.12	gi|15920682|ref|NP_376351.1|	-	0.1	12.2	0.1	0.1	12.2	0.0	2.5	2	1	0	2	2	2	0	Viral	small	hydrophobic	protein
E1-E2_ATPase	PF00122.15	gi|15920682|ref|NP_376351.1|	-	0.16	10.9	0.9	0.28	10.1	0.6	1.4	1	1	0	1	1	1	0	E1-E2	ATPase
DUF3353	PF11833.3	gi|15920682|ref|NP_376351.1|	-	0.32	10.4	3.2	0.4	10.1	2.2	1.2	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3353)
DUF3112	PF11309.3	gi|15920682|ref|NP_376351.1|	-	0.47	10.2	7.6	1.5	8.5	5.3	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3112)
DUF4149	PF13664.1	gi|15920682|ref|NP_376351.1|	-	6	6.9	9.2	6.2	6.9	4.0	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4149)
DUF4044	PF13253.1	gi|15920682|ref|NP_376351.1|	-	8.1	5.6	9.7	0.33	10.1	2.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4044)
MCM	PF00493.18	gi|15920683|ref|NP_376352.1|	-	3.9e-138	459.7	0.2	5.2e-138	459.3	0.2	1.2	1	0	0	1	1	1	1	MCM2/3/5	family
AAA_5	PF07728.9	gi|15920683|ref|NP_376352.1|	-	5.8e-08	32.5	0.0	1.3e-07	31.4	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
Mg_chelatase	PF01078.16	gi|15920683|ref|NP_376352.1|	-	2.5e-07	30.0	0.1	4e-05	22.8	0.0	2.6	1	1	1	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
Sigma54_activat	PF00158.21	gi|15920683|ref|NP_376352.1|	-	1.4e-05	24.6	0.2	0.00018	21.0	0.1	2.3	1	1	0	1	1	1	1	Sigma-54	interaction	domain
AAA_3	PF07726.6	gi|15920683|ref|NP_376352.1|	-	2.6e-05	23.8	0.0	6.1e-05	22.6	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
HTH_IclR	PF09339.5	gi|15920683|ref|NP_376352.1|	-	0.00054	19.5	0.0	0.0024	17.4	0.0	2.1	2	0	0	2	2	2	1	IclR	helix-turn-helix	domain
DUF3987	PF13148.1	gi|15920683|ref|NP_376352.1|	-	0.00072	18.2	0.1	0.03	12.8	0.0	2.2	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF3987)
MarR_2	PF12802.2	gi|15920683|ref|NP_376352.1|	-	0.014	15.0	0.0	0.068	12.8	0.0	2.2	2	0	0	2	2	2	0	MarR	family
Fe_dep_repress	PF01325.14	gi|15920683|ref|NP_376352.1|	-	0.024	14.5	0.1	0.071	13.0	0.1	1.7	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Sld5	PF05916.6	gi|15920685|ref|NP_376354.1|	-	7.4e-13	48.7	1.0	9.8e-13	48.3	0.7	1.2	1	0	0	1	1	1	1	GINS	complex	protein
THUMP	PF02926.12	gi|15920686|ref|NP_376355.1|	-	5.1e-12	45.8	1.5	6.5e-12	45.5	1.0	1.1	1	0	0	1	1	1	1	THUMP	domain
Cdc6_C	PF09079.6	gi|15920687|ref|NP_376356.1|	-	1.5e-23	82.2	0.2	6.9e-22	76.9	0.0	2.8	2	0	0	2	2	2	1	CDC6,	C	terminal
AAA_22	PF13401.1	gi|15920687|ref|NP_376356.1|	-	2.3e-12	47.1	0.5	9.6e-12	45.1	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|15920687|ref|NP_376356.1|	-	5.5e-08	33.0	0.1	1.4e-05	25.2	0.0	2.9	1	1	0	2	2	2	1	AAA	ATPase	domain
T2SE	PF00437.15	gi|15920687|ref|NP_376356.1|	-	0.0014	17.6	0.1	0.0026	16.7	0.0	1.4	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
NACHT	PF05729.7	gi|15920687|ref|NP_376356.1|	-	0.002	17.8	0.0	0.0041	16.7	0.0	1.6	1	0	0	1	1	1	1	NACHT	domain
Arch_ATPase	PF01637.13	gi|15920687|ref|NP_376356.1|	-	0.002	17.8	1.7	0.0047	16.6	1.2	1.7	1	0	0	1	1	1	1	Archaeal	ATPase
AAA_18	PF13238.1	gi|15920687|ref|NP_376356.1|	-	0.0035	17.6	0.4	0.014	15.7	0.0	2.3	3	0	0	3	3	3	1	AAA	domain
CbiA	PF01656.18	gi|15920687|ref|NP_376356.1|	-	0.013	14.8	0.1	0.14	11.5	0.0	2.3	2	0	0	2	2	2	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
DUF853	PF05872.7	gi|15920687|ref|NP_376356.1|	-	0.016	13.5	0.8	0.029	12.7	0.0	1.7	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF853)
AAA	PF00004.24	gi|15920687|ref|NP_376356.1|	-	0.02	15.0	0.0	0.071	13.3	0.0	2.0	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_19	PF13245.1	gi|15920687|ref|NP_376356.1|	-	0.043	13.5	0.1	0.096	12.4	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_24	PF13479.1	gi|15920687|ref|NP_376356.1|	-	0.061	12.8	0.5	0.12	11.9	0.3	1.5	1	0	0	1	1	1	0	AAA	domain
ResIII	PF04851.10	gi|15920687|ref|NP_376356.1|	-	0.063	13.1	0.1	0.21	11.4	0.0	1.8	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
DUF2075	PF09848.4	gi|15920687|ref|NP_376356.1|	-	0.069	12.1	0.0	0.1	11.5	0.0	1.4	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
Sigma54_activat	PF00158.21	gi|15920687|ref|NP_376356.1|	-	0.072	12.5	0.0	0.15	11.5	0.0	1.5	1	0	0	1	1	1	0	Sigma-54	interaction	domain
AAA_28	PF13521.1	gi|15920687|ref|NP_376356.1|	-	0.14	12.0	0.1	0.32	10.9	0.1	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_17	PF13207.1	gi|15920687|ref|NP_376356.1|	-	0.21	12.3	2.4	0.6	10.9	0.9	2.4	2	1	0	2	2	2	0	AAA	domain
DUF87	PF01935.12	gi|15920687|ref|NP_376356.1|	-	1.3	8.7	5.9	3	7.6	1.2	2.6	2	1	0	2	2	2	0	Domain	of	unknown	function	DUF87
MoaC	PF01967.16	gi|15920688|ref|NP_376357.1|	-	2e-50	170.0	4.3	2.2e-50	169.8	2.9	1.0	1	0	0	1	1	1	1	MoaC	family
TIP49	PF06068.8	gi|15920688|ref|NP_376357.1|	-	0.021	13.5	2.0	0.037	12.7	1.4	1.3	1	0	0	1	1	1	0	TIP49	C-terminus
AAA	PF00004.24	gi|15920689|ref|NP_376358.1|	-	3.2e-15	56.4	0.0	6.5e-15	55.5	0.0	1.5	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.1	gi|15920689|ref|NP_376358.1|	-	9.4e-10	38.7	0.2	2.5e-06	27.6	0.0	3.4	3	1	0	3	3	2	1	AAA	domain
AAA_14	PF13173.1	gi|15920689|ref|NP_376358.1|	-	3.1e-08	33.5	0.0	7.9e-08	32.2	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|15920689|ref|NP_376358.1|	-	5.1e-08	33.7	3.5	2.5e-07	31.5	0.2	3.3	1	1	1	2	2	2	1	AAA	domain
AAA_5	PF07728.9	gi|15920689|ref|NP_376358.1|	-	3.4e-07	30.0	0.0	7e-07	29.0	0.0	1.5	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
RuvB_N	PF05496.7	gi|15920689|ref|NP_376358.1|	-	5.8e-07	28.7	0.0	7e-05	21.9	0.0	2.2	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
TIP49	PF06068.8	gi|15920689|ref|NP_376358.1|	-	2e-06	26.8	0.6	0.034	12.8	0.1	2.5	3	0	0	3	3	3	2	TIP49	C-terminus
Rad17	PF03215.10	gi|15920689|ref|NP_376358.1|	-	4.1e-06	25.7	0.1	0.018	13.7	0.0	2.7	3	0	0	3	3	3	2	Rad17	cell	cycle	checkpoint	protein
AAA_16	PF13191.1	gi|15920689|ref|NP_376358.1|	-	9.6e-06	25.7	0.1	0.00018	21.5	0.0	2.6	2	1	1	3	3	3	1	AAA	ATPase	domain
AAA_18	PF13238.1	gi|15920689|ref|NP_376358.1|	-	2.2e-05	24.7	0.3	8.9e-05	22.8	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
IstB_IS21	PF01695.12	gi|15920689|ref|NP_376358.1|	-	2.5e-05	23.7	0.0	7.2e-05	22.2	0.0	1.7	1	1	0	1	1	1	1	IstB-like	ATP	binding	protein
Arch_ATPase	PF01637.13	gi|15920689|ref|NP_376358.1|	-	5.8e-05	22.9	0.6	0.00035	20.3	0.0	2.4	2	0	0	2	2	2	1	Archaeal	ATPase
NACHT	PF05729.7	gi|15920689|ref|NP_376358.1|	-	9.8e-05	22.0	0.1	0.029	14.0	0.0	3.0	2	1	0	3	3	3	1	NACHT	domain
DNA_pol3_delta	PF06144.8	gi|15920689|ref|NP_376358.1|	-	0.00016	21.2	2.2	0.00071	19.1	0.0	2.6	2	1	1	3	3	3	1	DNA	polymerase	III,	delta	subunit
AAA_24	PF13479.1	gi|15920689|ref|NP_376358.1|	-	0.00044	19.8	0.0	0.00086	18.9	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
NB-ARC	PF00931.17	gi|15920689|ref|NP_376358.1|	-	0.00046	19.1	0.0	0.0013	17.6	0.0	1.8	2	0	0	2	2	2	1	NB-ARC	domain
RNA_helicase	PF00910.17	gi|15920689|ref|NP_376358.1|	-	0.00057	20.0	0.0	0.0019	18.3	0.0	2.0	1	0	0	1	1	1	1	RNA	helicase
AAA_28	PF13521.1	gi|15920689|ref|NP_376358.1|	-	0.00097	19.1	0.0	0.0032	17.4	0.0	1.9	2	0	0	2	2	1	1	AAA	domain
AAA_33	PF13671.1	gi|15920689|ref|NP_376358.1|	-	0.0011	18.8	0.0	0.0025	17.6	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
ABC_tran	PF00005.22	gi|15920689|ref|NP_376358.1|	-	0.0068	16.7	0.0	0.032	14.5	0.0	2.1	2	0	0	2	2	2	1	ABC	transporter
DUF258	PF03193.11	gi|15920689|ref|NP_376358.1|	-	0.0077	15.4	0.0	0.014	14.6	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
Zeta_toxin	PF06414.7	gi|15920689|ref|NP_376358.1|	-	0.01	14.9	0.0	0.02	14.0	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
DUF815	PF05673.8	gi|15920689|ref|NP_376358.1|	-	0.011	14.7	0.0	0.037	12.9	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF815)
AAA_25	PF13481.1	gi|15920689|ref|NP_376358.1|	-	0.012	15.0	0.0	0.027	13.8	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
KaiC	PF06745.8	gi|15920689|ref|NP_376358.1|	-	0.012	14.7	0.1	0.22	10.6	0.0	2.7	2	1	1	3	3	3	0	KaiC
Bac_DnaA	PF00308.13	gi|15920689|ref|NP_376358.1|	-	0.012	15.2	0.8	0.83	9.2	0.0	2.8	3	0	0	3	3	3	0	Bacterial	dnaA	protein
AAA_19	PF13245.1	gi|15920689|ref|NP_376358.1|	-	0.016	14.9	0.0	0.035	13.8	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
NTPase_1	PF03266.10	gi|15920689|ref|NP_376358.1|	-	0.018	14.7	0.0	0.2	11.3	0.0	2.1	2	0	0	2	2	2	0	NTPase
AAA_29	PF13555.1	gi|15920689|ref|NP_376358.1|	-	0.021	14.3	0.0	0.052	13.0	0.0	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
Mg_chelatase	PF01078.16	gi|15920689|ref|NP_376358.1|	-	0.022	13.9	0.0	0.038	13.1	0.0	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_3	PF07726.6	gi|15920689|ref|NP_376358.1|	-	0.026	14.1	0.0	0.11	12.0	0.0	2.1	2	1	0	2	2	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_2	PF07724.9	gi|15920689|ref|NP_376358.1|	-	0.027	14.3	0.0	0.08	12.8	0.0	1.8	2	0	0	2	2	1	0	AAA	domain	(Cdc48	subfamily)
PPV_E1_C	PF00519.12	gi|15920689|ref|NP_376358.1|	-	0.028	13.0	0.0	0.05	12.2	0.0	1.4	1	0	0	1	1	1	0	Papillomavirus	helicase
Parvo_NS1	PF01057.12	gi|15920689|ref|NP_376358.1|	-	0.031	13.1	0.0	0.13	11.1	0.0	1.9	2	0	0	2	2	2	0	Parvovirus	non-structural	protein	NS1
AAA_21	PF13304.1	gi|15920689|ref|NP_376358.1|	-	0.034	14.1	4.6	0.6	10.0	0.0	3.0	3	1	0	3	3	3	0	AAA	domain
MMR_HSR1	PF01926.18	gi|15920689|ref|NP_376358.1|	-	0.075	12.9	0.0	0.2	11.6	0.0	1.8	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_10	PF12846.2	gi|15920689|ref|NP_376358.1|	-	0.078	12.4	0.0	1.8	7.9	0.0	2.2	2	0	0	2	2	2	0	AAA-like	domain
SKI	PF01202.17	gi|15920689|ref|NP_376358.1|	-	0.095	12.5	0.0	0.22	11.4	0.0	1.6	1	0	0	1	1	1	0	Shikimate	kinase
MobB	PF03205.9	gi|15920689|ref|NP_376358.1|	-	0.13	11.9	0.0	0.34	10.5	0.0	1.7	2	0	0	2	2	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
DUF2797	PF10977.3	gi|15920689|ref|NP_376358.1|	-	0.14	11.7	0.2	0.4	10.2	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2797)
AAA_23	PF13476.1	gi|15920689|ref|NP_376358.1|	-	0.15	12.3	9.0	12	6.1	6.2	2.5	1	1	0	1	1	1	0	AAA	domain
Rep_fac_C	PF08542.6	gi|15920690|ref|NP_376359.1|	-	3.7e-24	84.5	2.5	3.9e-24	84.4	0.1	2.2	3	0	0	3	3	1	1	Replication	factor	C	C-terminal	domain
AAA	PF00004.24	gi|15920690|ref|NP_376359.1|	-	1.5e-15	57.5	0.0	3.8e-15	56.2	0.0	1.7	2	0	0	2	2	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DNA_pol3_delta2	PF13177.1	gi|15920690|ref|NP_376359.1|	-	2.2e-13	50.1	0.0	4.5e-11	42.6	0.0	2.3	1	1	0	1	1	1	1	DNA	polymerase	III,	delta	subunit
Rad17	PF03215.10	gi|15920690|ref|NP_376359.1|	-	4.6e-10	38.8	0.0	2.6e-05	23.1	0.0	2.2	1	1	0	2	2	2	2	Rad17	cell	cycle	checkpoint	protein
RuvB_N	PF05496.7	gi|15920690|ref|NP_376359.1|	-	3.1e-08	32.9	0.1	2.5e-07	29.9	0.0	2.1	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_22	PF13401.1	gi|15920690|ref|NP_376359.1|	-	1.1e-07	32.0	0.1	8.7e-05	22.6	0.0	3.2	2	1	0	2	2	2	1	AAA	domain
AAA_14	PF13173.1	gi|15920690|ref|NP_376359.1|	-	1e-06	28.7	0.1	6.4e-06	26.0	0.0	2.1	1	1	1	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|15920690|ref|NP_376359.1|	-	1e-06	28.8	0.0	0.00018	21.5	0.0	2.3	1	1	1	2	2	2	1	AAA	ATPase	domain
DNA_pol3_delta	PF06144.8	gi|15920690|ref|NP_376359.1|	-	1.9e-06	27.5	0.5	1.7e-05	24.4	0.1	2.3	2	1	0	2	2	2	1	DNA	polymerase	III,	delta	subunit
AAA_3	PF07726.6	gi|15920690|ref|NP_376359.1|	-	2.2e-06	27.2	0.0	3.8e-06	26.5	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_18	PF13238.1	gi|15920690|ref|NP_376359.1|	-	1.2e-05	25.5	0.9	0.00015	22.0	0.0	2.8	2	1	1	3	3	3	1	AAA	domain
TIP49	PF06068.8	gi|15920690|ref|NP_376359.1|	-	2.5e-05	23.1	0.0	0.013	14.2	0.0	2.3	1	1	0	2	2	2	2	TIP49	C-terminus
IstB_IS21	PF01695.12	gi|15920690|ref|NP_376359.1|	-	3.3e-05	23.3	0.0	6.6e-05	22.3	0.0	1.5	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_19	PF13245.1	gi|15920690|ref|NP_376359.1|	-	6.7e-05	22.5	0.0	0.00016	21.3	0.0	1.7	1	0	0	1	1	1	1	Part	of	AAA	domain
Sigma54_activ_2	PF14532.1	gi|15920690|ref|NP_376359.1|	-	0.00066	19.7	0.0	0.0025	17.8	0.0	1.9	1	1	0	1	1	1	1	Sigma-54	interaction	domain
AAA_11	PF13086.1	gi|15920690|ref|NP_376359.1|	-	0.00077	19.1	0.0	0.0014	18.2	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|15920690|ref|NP_376359.1|	-	0.00092	18.7	0.1	0.03	13.7	0.1	2.7	1	1	0	1	1	1	1	AAA-like	domain
DUF2075	PF09848.4	gi|15920690|ref|NP_376359.1|	-	0.0015	17.6	0.0	0.01	14.8	0.0	2.0	1	1	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
T2SE	PF00437.15	gi|15920690|ref|NP_376359.1|	-	0.0016	17.4	0.0	0.0036	16.2	0.0	1.6	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
Mg_chelatase	PF01078.16	gi|15920690|ref|NP_376359.1|	-	0.0023	17.1	0.0	0.1	11.7	0.0	2.5	2	1	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_5	PF07728.9	gi|15920690|ref|NP_376359.1|	-	0.0034	17.0	0.0	0.012	15.2	0.0	2.0	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
ResIII	PF04851.10	gi|15920690|ref|NP_376359.1|	-	0.0042	16.9	0.0	0.018	14.9	0.0	1.8	1	1	1	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
AAA_17	PF13207.1	gi|15920690|ref|NP_376359.1|	-	0.0045	17.8	1.2	0.0092	16.8	0.1	2.2	2	1	0	2	2	1	1	AAA	domain
AAA_25	PF13481.1	gi|15920690|ref|NP_376359.1|	-	0.0054	16.1	0.3	0.026	13.9	0.1	2.2	2	1	0	2	2	2	1	AAA	domain
DUF815	PF05673.8	gi|15920690|ref|NP_376359.1|	-	0.0065	15.4	0.0	0.012	14.5	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
PhoH	PF02562.11	gi|15920690|ref|NP_376359.1|	-	0.0071	15.5	0.0	0.67	9.1	0.0	2.4	2	0	0	2	2	2	1	PhoH-like	protein
KTI12	PF08433.5	gi|15920690|ref|NP_376359.1|	-	0.011	15.0	0.0	0.027	13.6	0.0	1.8	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
DEAD	PF00270.24	gi|15920690|ref|NP_376359.1|	-	0.012	15.0	0.1	5.2	6.5	0.0	2.6	2	1	1	3	3	3	0	DEAD/DEAH	box	helicase
AAA_30	PF13604.1	gi|15920690|ref|NP_376359.1|	-	0.013	15.1	0.0	0.051	13.1	0.0	2.1	1	1	0	1	1	1	0	AAA	domain
SseB_C	PF14581.1	gi|15920690|ref|NP_376359.1|	-	0.017	14.9	0.0	0.064	13.1	0.0	2.0	1	0	0	1	1	1	0	SseB	protein	C-terminal	domain
Sigma54_activat	PF00158.21	gi|15920690|ref|NP_376359.1|	-	0.018	14.5	0.0	0.41	10.1	0.0	2.2	2	0	0	2	2	2	0	Sigma-54	interaction	domain
NTPase_1	PF03266.10	gi|15920690|ref|NP_376359.1|	-	0.019	14.6	0.3	0.68	9.6	0.0	2.8	2	1	1	3	3	3	0	NTPase
AAA_33	PF13671.1	gi|15920690|ref|NP_376359.1|	-	0.019	14.8	0.2	0.052	13.4	0.2	2.0	1	1	0	1	1	1	0	AAA	domain
SNF2_N	PF00176.18	gi|15920690|ref|NP_376359.1|	-	0.021	13.6	0.0	2.5	6.7	0.0	2.1	1	1	1	2	2	2	0	SNF2	family	N-terminal	domain
FtsK_SpoIIIE	PF01580.13	gi|15920690|ref|NP_376359.1|	-	0.022	14.2	0.0	0.062	12.7	0.0	1.7	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
RNA_helicase	PF00910.17	gi|15920690|ref|NP_376359.1|	-	0.046	13.8	0.0	0.1	12.7	0.0	1.7	1	1	0	1	1	1	0	RNA	helicase
AAA_28	PF13521.1	gi|15920690|ref|NP_376359.1|	-	0.054	13.4	0.0	0.11	12.4	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
Disaggr_repeat	PF06848.6	gi|15920690|ref|NP_376359.1|	-	0.062	12.7	0.0	0.1	11.9	0.0	1.3	1	0	0	1	1	1	0	Disaggregatase	related	repeat
AAA_23	PF13476.1	gi|15920690|ref|NP_376359.1|	-	0.067	13.5	0.0	0.12	12.6	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
AAA_29	PF13555.1	gi|15920690|ref|NP_376359.1|	-	0.092	12.2	0.0	0.19	11.2	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
Viral_helicase1	PF01443.13	gi|15920690|ref|NP_376359.1|	-	0.1	12.0	0.0	0.16	11.4	0.0	1.3	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
PBP	PF01161.15	gi|15920691|ref|NP_376360.1|	-	3.7e-39	133.8	0.0	4.2e-39	133.7	0.0	1.0	1	0	0	1	1	1	1	Phosphatidylethanolamine-binding	protein
Proteasome	PF00227.21	gi|15920692|ref|NP_376361.1|	-	2.1e-50	170.6	0.4	2.4e-50	170.4	0.3	1.0	1	0	0	1	1	1	1	Proteasome	subunit
Amidase	PF01425.16	gi|15920693|ref|NP_376362.1|	-	2.1e-89	300.4	0.3	2.5e-88	296.8	0.2	1.9	1	1	0	1	1	1	1	Amidase
ADH_N	PF08240.7	gi|15920695|ref|NP_376364.1|	-	3.9e-27	94.1	0.1	7.6e-27	93.2	0.1	1.5	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|15920695|ref|NP_376364.1|	-	2.1e-22	79.0	0.2	3e-22	78.5	0.2	1.2	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|15920695|ref|NP_376364.1|	-	4.9e-12	46.8	0.0	9.9e-12	45.8	0.0	1.5	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
Eno-Rase_NADH_b	PF12242.3	gi|15920695|ref|NP_376364.1|	-	0.00055	19.6	1.9	0.0015	18.2	1.3	1.8	1	0	0	1	1	1	1	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
AlaDh_PNT_C	PF01262.16	gi|15920695|ref|NP_376364.1|	-	0.00066	19.2	0.6	0.0012	18.4	0.4	1.3	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
NAD_binding_10	PF13460.1	gi|15920695|ref|NP_376364.1|	-	0.0013	18.7	1.1	0.0031	17.5	0.4	1.8	2	0	0	2	2	2	1	NADH(P)-binding
PTS_IIB	PF02302.12	gi|15920695|ref|NP_376364.1|	-	0.02	15.3	0.5	0.055	13.9	0.4	1.7	1	0	0	1	1	1	0	PTS	system,	Lactose/Cellobiose	specific	IIB	subunit
CMAS	PF02353.15	gi|15920695|ref|NP_376364.1|	-	0.038	13.0	0.1	0.069	12.2	0.1	1.4	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
THF_DHG_CYH_C	PF02882.14	gi|15920695|ref|NP_376364.1|	-	0.058	12.4	0.5	0.11	11.6	0.4	1.4	1	0	0	1	1	1	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
SIS_2	PF13580.1	gi|15920695|ref|NP_376364.1|	-	0.076	12.7	0.2	0.14	11.8	0.2	1.4	1	0	0	1	1	1	0	SIS	domain
E1-N	PF14463.1	gi|15920695|ref|NP_376364.1|	-	0.1	12.1	0.1	0.21	11.2	0.1	1.5	1	0	0	1	1	1	0	E1	N-terminal	domain
DIM	PF08194.7	gi|15920697|ref|NP_376366.1|	-	1.3	9.0	3.7	2.4	8.2	2.5	1.5	1	0	0	1	1	1	0	DIM	protein
eRF1_2	PF03464.10	gi|15920698|ref|NP_376367.1|	-	5.5e-37	127.0	0.0	8.8e-37	126.4	0.0	1.3	1	0	0	1	1	1	1	eRF1	domain	2
eRF1_3	PF03465.10	gi|15920698|ref|NP_376367.1|	-	9.1e-22	77.4	0.3	6.8e-21	74.6	0.2	2.3	1	1	0	1	1	1	1	eRF1	domain	3
eRF1_1	PF03463.10	gi|15920698|ref|NP_376367.1|	-	5e-16	58.4	0.0	9.8e-16	57.5	0.0	1.5	1	0	0	1	1	1	1	eRF1	domain	1
Pribosyltran	PF00156.22	gi|15920699|ref|NP_376368.1|	-	5.5e-11	42.2	0.1	9e-11	41.5	0.0	1.3	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.1	gi|15920699|ref|NP_376368.1|	-	0.097	11.8	0.0	0.13	11.4	0.0	1.1	1	0	0	1	1	1	0	Uracil	phosphoribosyltransferase
Pribosyl_synth	PF14572.1	gi|15920699|ref|NP_376368.1|	-	0.11	12.2	0.1	0.16	11.7	0.1	1.2	1	0	0	1	1	1	0	Phosphoribosyl	synthetase-associated	domain
PNP_UDP_1	PF01048.15	gi|15920700|ref|NP_376369.1|	-	3e-45	153.9	0.0	3.5e-45	153.8	0.0	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
Adaptin_N	PF01602.15	gi|15920700|ref|NP_376369.1|	-	0.027	12.8	0.0	0.036	12.4	0.0	1.1	1	0	0	1	1	1	0	Adaptin	N	terminal	region
polyprenyl_synt	PF00348.12	gi|15920702|ref|NP_376371.1|	-	7.4e-33	113.4	0.1	1.1e-32	112.9	0.0	1.3	1	0	0	1	1	1	1	Polyprenyl	synthetase
RimK	PF08443.6	gi|15920703|ref|NP_376372.1|	-	2e-38	131.7	0.0	3.4e-38	131.0	0.0	1.3	1	0	0	1	1	1	1	RimK-like	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|15920703|ref|NP_376372.1|	-	4.6e-15	55.8	0.0	7e-15	55.2	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|15920703|ref|NP_376372.1|	-	3.3e-13	49.0	0.0	1.9e-12	46.6	0.0	1.8	1	1	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
GSH-S_ATP	PF02955.11	gi|15920703|ref|NP_376372.1|	-	4.5e-12	45.4	0.0	7e-12	44.8	0.0	1.3	1	0	0	1	1	1	1	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
ATP-grasp_3	PF02655.9	gi|15920703|ref|NP_376372.1|	-	1e-09	38.4	0.1	1.9e-09	37.6	0.1	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_YheCD	PF14398.1	gi|15920703|ref|NP_376372.1|	-	5.5e-07	28.6	0.0	0.0035	16.1	0.0	2.3	2	0	0	2	2	2	2	YheC/D	like	ATP-grasp
Synapsin_C	PF02750.9	gi|15920703|ref|NP_376372.1|	-	0.00015	20.8	0.1	0.0002	20.5	0.0	1.2	1	0	0	1	1	1	1	Synapsin,	ATP	binding	domain
DUF4343	PF14243.1	gi|15920703|ref|NP_376372.1|	-	0.00024	20.9	0.3	0.00059	19.6	0.0	1.7	2	1	0	2	2	2	1	Domain	of	unknown	function	(DUF4343)
Ins134_P3_kin	PF05770.6	gi|15920703|ref|NP_376372.1|	-	0.0015	17.6	0.2	0.2	10.6	0.0	2.2	1	1	1	2	2	2	2	Inositol	1,	3,	4-trisphosphate	5/6-kinase
CP_ATPgrasp_1	PF04174.8	gi|15920703|ref|NP_376372.1|	-	0.0023	16.5	0.0	0.6	8.6	0.0	2.1	2	0	0	2	2	2	2	A	circularly	permuted	ATPgrasp
CPSase_L_D2	PF02786.12	gi|15920703|ref|NP_376372.1|	-	0.0057	15.9	0.0	0.013	14.7	0.0	1.6	1	1	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
AsnC_trans_reg	PF01037.16	gi|15920704|ref|NP_376373.1|	-	6.8e-18	64.1	0.2	1e-17	63.5	0.1	1.3	1	0	0	1	1	1	1	AsnC	family
HTH_AsnC-type	PF13404.1	gi|15920704|ref|NP_376373.1|	-	7.4e-18	63.8	0.4	1.2e-17	63.1	0.3	1.3	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_24	PF13412.1	gi|15920704|ref|NP_376373.1|	-	2.5e-17	61.9	2.0	5.1e-17	61.0	1.4	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|15920704|ref|NP_376373.1|	-	1.5e-08	34.1	0.1	3.8e-08	32.8	0.1	1.7	1	0	0	1	1	1	1	HTH	domain
HTH_5	PF01022.15	gi|15920704|ref|NP_376373.1|	-	0.00022	20.8	0.0	0.00045	19.8	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_23	PF13384.1	gi|15920704|ref|NP_376373.1|	-	0.00022	20.7	0.1	0.0011	18.4	0.0	2.0	2	0	0	2	2	2	1	Homeodomain-like	domain
MarR	PF01047.17	gi|15920704|ref|NP_376373.1|	-	0.00053	19.6	0.4	0.0033	17.0	0.2	2.2	2	1	0	2	2	2	1	MarR	family
ACT_4	PF13291.1	gi|15920704|ref|NP_376373.1|	-	0.00063	20.0	0.1	0.017	15.4	0.0	2.6	3	0	0	3	3	3	1	ACT	domain
HTH_Mga	PF08280.6	gi|15920704|ref|NP_376373.1|	-	0.0012	18.5	0.1	0.0026	17.4	0.1	1.5	1	0	0	1	1	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
Fe_dep_repress	PF01325.14	gi|15920704|ref|NP_376373.1|	-	0.0015	18.4	0.5	0.035	14.0	0.0	2.5	2	0	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
MarR_2	PF12802.2	gi|15920704|ref|NP_376373.1|	-	0.0023	17.5	0.0	0.0039	16.8	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_20	PF12840.2	gi|15920704|ref|NP_376373.1|	-	0.0024	17.6	0.0	0.0049	16.6	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
Sigma70_r4	PF04545.11	gi|15920704|ref|NP_376373.1|	-	0.0036	16.5	0.4	0.025	13.8	0.0	2.3	2	1	0	2	2	2	1	Sigma-70,	region	4
HxlR	PF01638.12	gi|15920704|ref|NP_376373.1|	-	0.0055	16.3	0.0	0.011	15.2	0.0	1.7	1	1	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_Tnp_ISL3	PF13542.1	gi|15920704|ref|NP_376373.1|	-	0.0065	15.6	0.0	0.019	14.1	0.0	1.8	2	0	0	2	2	2	1	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_34	PF13601.1	gi|15920704|ref|NP_376373.1|	-	0.011	15.7	0.0	0.02	14.8	0.0	1.4	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
Mga	PF05043.8	gi|15920704|ref|NP_376373.1|	-	0.013	15.8	0.1	0.027	14.7	0.0	1.7	2	0	0	2	2	1	0	Mga	helix-turn-helix	domain
HTH_27	PF13463.1	gi|15920704|ref|NP_376373.1|	-	0.013	15.7	0.0	0.033	14.5	0.0	1.7	2	0	0	2	2	1	0	Winged	helix	DNA-binding	domain
NapD	PF03927.8	gi|15920704|ref|NP_376373.1|	-	0.014	15.1	0.0	0.029	14.1	0.0	1.5	1	0	0	1	1	1	0	NapD	protein
Sigma70_r4_2	PF08281.7	gi|15920704|ref|NP_376373.1|	-	0.015	14.7	0.2	0.067	12.6	0.0	2.1	2	0	0	2	2	2	0	Sigma-70,	region	4
GerE	PF00196.14	gi|15920704|ref|NP_376373.1|	-	0.024	13.9	0.2	0.15	11.3	0.0	2.1	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
TrmB	PF01978.14	gi|15920704|ref|NP_376373.1|	-	0.032	13.9	1.1	0.089	12.5	0.0	2.2	2	1	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
Myb_DNA-bind_6	PF13921.1	gi|15920704|ref|NP_376373.1|	-	0.047	13.8	0.1	0.098	12.7	0.0	1.6	2	0	0	2	2	1	0	Myb-like	DNA-binding	domain
HTH_IclR	PF09339.5	gi|15920704|ref|NP_376373.1|	-	0.047	13.2	0.0	0.074	12.6	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_28	PF13518.1	gi|15920704|ref|NP_376373.1|	-	0.047	13.6	0.0	0.078	12.9	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_Crp_2	PF13545.1	gi|15920704|ref|NP_376373.1|	-	0.065	13.0	0.0	0.18	11.5	0.0	1.7	2	0	0	2	2	2	0	Crp-like	helix-turn-helix	domain
HTH_8	PF02954.14	gi|15920704|ref|NP_376373.1|	-	0.07	12.6	0.0	0.11	12.0	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	Fis	family
HTH_36	PF13730.1	gi|15920704|ref|NP_376373.1|	-	0.084	13.0	0.0	0.16	12.0	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_29	PF13551.1	gi|15920704|ref|NP_376373.1|	-	0.087	12.9	0.0	0.15	12.1	0.0	1.3	1	0	0	1	1	1	0	Winged	helix-turn	helix
HTH_38	PF13936.1	gi|15920704|ref|NP_376373.1|	-	0.12	11.9	0.2	0.25	10.9	0.1	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_1	PF00126.22	gi|15920704|ref|NP_376373.1|	-	0.14	11.9	0.0	0.24	11.1	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
NAD_binding_8	PF13450.1	gi|15920705|ref|NP_376374.1|	-	6.2e-07	29.3	0.0	1.6e-06	28.0	0.0	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_2	PF07992.9	gi|15920705|ref|NP_376374.1|	-	8.5e-06	25.7	0.1	1.6e-05	24.8	0.1	1.4	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|15920705|ref|NP_376374.1|	-	4.3e-05	22.5	0.1	0.00083	18.3	0.1	2.2	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
HI0933_like	PF03486.9	gi|15920705|ref|NP_376374.1|	-	0.0006	18.3	0.0	0.0069	14.9	0.0	2.1	2	0	0	2	2	2	1	HI0933-like	protein
GIDA	PF01134.17	gi|15920705|ref|NP_376374.1|	-	0.0014	17.6	0.2	0.0026	16.6	0.1	1.5	1	1	0	1	1	1	1	Glucose	inhibited	division	protein	A
Pyr_redox_3	PF13738.1	gi|15920705|ref|NP_376374.1|	-	0.0017	18.4	0.1	0.0052	16.8	0.0	1.8	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|15920705|ref|NP_376374.1|	-	0.035	14.5	0.2	0.14	12.5	0.0	2.1	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.7	gi|15920705|ref|NP_376374.1|	-	0.048	12.5	0.0	0.16	10.8	0.1	1.7	2	0	0	2	2	2	0	Lycopene	cyclase	protein
DUF4468	PF14730.1	gi|15920705|ref|NP_376374.1|	-	0.062	12.9	0.7	0.14	11.8	0.5	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4468)	with	TBP-like	fold
FAD_binding_2	PF00890.19	gi|15920705|ref|NP_376374.1|	-	0.091	11.5	0.1	0.13	11.0	0.0	1.2	1	0	0	1	1	1	0	FAD	binding	domain
TPK_catalytic	PF04263.11	gi|15920705|ref|NP_376374.1|	-	0.13	11.8	0.0	0.22	11.0	0.0	1.3	1	0	0	1	1	1	0	Thiamin	pyrophosphokinase,	catalytic	domain
FAD_binding_3	PF01494.14	gi|15920705|ref|NP_376374.1|	-	0.16	10.9	0.1	0.25	10.3	0.1	1.2	1	0	0	1	1	1	0	FAD	binding	domain
Got1	PF04178.7	gi|15920706|ref|NP_376375.1|	-	7	6.7	17.9	0.22	11.6	4.0	2.0	1	1	1	2	2	2	0	Got1/Sft2-like	family
Metallophos_2	PF12850.2	gi|15920707|ref|NP_376376.1|	-	6.4e-06	26.0	0.0	7e-06	25.9	0.0	1.0	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
FAD_binding_2	PF00890.19	gi|15920709|ref|NP_376378.1|	-	0.0017	17.2	0.0	0.0024	16.7	0.0	1.3	1	0	0	1	1	1	1	FAD	binding	domain
Trp_halogenase	PF04820.9	gi|15920709|ref|NP_376378.1|	-	0.028	13.0	0.0	0.11	11.1	0.0	1.8	1	1	0	1	1	1	0	Tryptophan	halogenase
FAD_binding_3	PF01494.14	gi|15920709|ref|NP_376378.1|	-	0.11	11.5	0.2	0.59	9.1	0.1	1.9	1	1	0	1	1	1	0	FAD	binding	domain
DUF2070	PF09843.4	gi|15920710|ref|NP_376379.1|	-	3.7e-38	130.7	0.0	5.4e-38	130.2	0.0	1.2	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2070)
Hydrolase_6	PF13344.1	gi|15920712|ref|NP_376381.1|	-	1.8e-24	85.5	0.0	2.9e-24	84.8	0.0	1.3	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|15920712|ref|NP_376381.1|	-	6.1e-17	61.1	0.0	1.2e-16	60.1	0.0	1.5	1	0	0	1	1	1	1	HAD-hyrolase-like
HAD_2	PF13419.1	gi|15920712|ref|NP_376381.1|	-	9.6e-06	25.9	0.0	0.0013	19.0	0.0	2.6	2	1	1	3	3	3	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|15920712|ref|NP_376381.1|	-	0.001	19.4	0.2	0.013	15.9	0.1	2.1	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
YhfZ_C	PF14503.1	gi|15920712|ref|NP_376381.1|	-	0.013	14.8	0.0	0.028	13.7	0.0	1.7	1	1	0	1	1	1	0	YhfZ	C-terminal	domain
Imm3	PF14425.1	gi|15920712|ref|NP_376381.1|	-	0.091	12.7	0.4	0.19	11.6	0.2	1.6	1	0	0	1	1	1	0	Immunity	protein	Imm3
FAD_binding_2	PF00890.19	gi|15920713|ref|NP_376382.1|	-	3.8e-111	371.8	0.6	4.7e-111	371.5	0.4	1.1	1	0	0	1	1	1	1	FAD	binding	domain
Succ_DH_flav_C	PF02910.15	gi|15920713|ref|NP_376382.1|	-	8.9e-48	161.3	0.2	1.3e-47	160.8	0.2	1.3	1	0	0	1	1	1	1	Fumarate	reductase	flavoprotein	C-term
DAO	PF01266.19	gi|15920713|ref|NP_376382.1|	-	6.5e-10	38.4	1.4	7e-08	31.7	0.7	2.2	1	1	0	2	2	2	1	FAD	dependent	oxidoreductase
FAD_binding_3	PF01494.14	gi|15920713|ref|NP_376382.1|	-	3.5e-06	26.3	0.2	6.3e-06	25.4	0.2	1.4	1	0	0	1	1	1	1	FAD	binding	domain
HI0933_like	PF03486.9	gi|15920713|ref|NP_376382.1|	-	8.6e-06	24.4	0.4	4.3e-05	22.1	0.3	1.9	2	0	0	2	2	2	1	HI0933-like	protein
Pyr_redox_2	PF07992.9	gi|15920713|ref|NP_376382.1|	-	2.3e-05	24.3	5.0	8.4e-05	22.5	3.5	2.2	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.12	gi|15920713|ref|NP_376382.1|	-	2.6e-05	23.4	1.8	9.1e-05	21.6	0.3	2.4	3	0	0	3	3	3	1	Thi4	family
NAD_binding_8	PF13450.1	gi|15920713|ref|NP_376382.1|	-	5.6e-05	23.0	1.3	0.00022	21.1	0.9	2.1	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
GIDA	PF01134.17	gi|15920713|ref|NP_376382.1|	-	0.00027	19.9	3.0	0.0008	18.3	1.9	1.8	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
Lycopene_cycl	PF05834.7	gi|15920713|ref|NP_376382.1|	-	0.003	16.5	0.2	0.0051	15.7	0.1	1.3	1	0	0	1	1	1	1	Lycopene	cyclase	protein
FAD_oxidored	PF12831.2	gi|15920713|ref|NP_376382.1|	-	0.01	14.9	2.3	0.032	13.3	1.5	1.8	2	0	0	2	2	2	0	FAD	dependent	oxidoreductase
3HCDH_N	PF02737.13	gi|15920713|ref|NP_376382.1|	-	0.059	13.0	0.3	0.12	12.0	0.2	1.5	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Pyr_redox_3	PF13738.1	gi|15920713|ref|NP_376382.1|	-	0.085	12.9	0.4	0.2	11.6	0.2	1.6	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|15920713|ref|NP_376382.1|	-	0.12	12.7	2.0	0.39	11.1	1.4	1.9	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
Trp_halogenase	PF04820.9	gi|15920713|ref|NP_376382.1|	-	0.18	10.3	0.5	0.26	9.8	0.3	1.2	1	0	0	1	1	1	0	Tryptophan	halogenase
Fer2_3	PF13085.1	gi|15920714|ref|NP_376383.1|	-	9.4e-34	115.5	0.0	1.8e-33	114.6	0.0	1.5	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_8	PF13183.1	gi|15920714|ref|NP_376383.1|	-	8.5e-12	44.9	4.3	8.5e-12	44.9	3.0	2.0	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|15920714|ref|NP_376383.1|	-	9.8e-09	35.3	12.9	3.9e-08	33.4	3.5	2.5	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|15920714|ref|NP_376383.1|	-	2.9e-08	33.3	5.0	2.9e-08	33.3	3.5	2.3	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|15920714|ref|NP_376383.1|	-	3.9e-08	33.5	5.0	3.9e-08	33.5	3.5	2.4	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|15920714|ref|NP_376383.1|	-	4.9e-07	30.0	13.9	6e-06	26.5	4.4	2.7	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|15920714|ref|NP_376383.1|	-	6.8e-05	22.5	16.6	0.00047	19.9	0.7	3.1	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_13	PF13370.1	gi|15920714|ref|NP_376383.1|	-	0.0003	21.1	4.1	0.029	14.7	0.3	2.8	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_15	PF13459.1	gi|15920714|ref|NP_376383.1|	-	0.0005	20.5	2.5	0.11	13.0	0.2	2.6	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_16	PF13484.1	gi|15920714|ref|NP_376383.1|	-	0.00057	20.5	7.2	0.00057	20.5	5.0	2.9	2	2	1	3	3	3	2	4Fe-4S	double	cluster	binding	domain
Fer4	PF00037.22	gi|15920714|ref|NP_376383.1|	-	0.00086	18.8	20.3	0.0054	16.2	2.0	3.1	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|15920714|ref|NP_376383.1|	-	0.0028	17.4	19.3	0.0071	16.1	0.8	3.0	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|15920714|ref|NP_376383.1|	-	0.0035	17.1	11.6	0.065	13.0	0.3	2.7	3	0	0	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|15920714|ref|NP_376383.1|	-	0.0042	17.4	11.7	0.13	12.7	0.6	2.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Spo0A_C	PF08769.6	gi|15920714|ref|NP_376383.1|	-	0.026	14.4	0.5	6.7	6.6	0.2	3.2	2	1	0	2	2	2	0	Sporulation	initiation	factor	Spo0A	C	terminal
Fer2	PF00111.22	gi|15920714|ref|NP_376383.1|	-	0.04	13.6	0.6	0.04	13.6	0.4	2.4	2	1	1	3	3	3	0	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_4	PF12800.2	gi|15920714|ref|NP_376383.1|	-	0.097	13.0	1.2	0.097	13.0	0.9	3.1	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer2_4	PF13510.1	gi|15920714|ref|NP_376383.1|	-	0.12	12.1	0.2	0.24	11.2	0.1	1.4	1	0	0	1	1	1	0	2Fe-2S	iron-sulfur	cluster	binding	domain
CCG	PF02754.11	gi|15920715|ref|NP_376384.1|	-	3.2e-34	116.7	0.4	1.8e-18	66.3	0.1	2.3	2	0	0	2	2	2	2	Cysteine-rich	domain
EzrA	PF06160.7	gi|15920716|ref|NP_376385.1|	-	0.071	11.2	0.0	0.085	11.0	0.0	1.1	1	0	0	1	1	1	0	Septation	ring	formation	regulator,	EzrA
VWA_2	PF13519.1	gi|15920717|ref|NP_376386.1|	-	1.2e-09	38.4	0.0	2.6e-09	37.4	0.0	1.6	2	0	0	2	2	2	1	von	Willebrand	factor	type	A	domain
VWA_3	PF13768.1	gi|15920717|ref|NP_376386.1|	-	6.8e-07	29.1	0.0	1.6e-06	27.9	0.0	1.6	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.23	gi|15920717|ref|NP_376386.1|	-	2e-06	27.6	0.0	5.8e-06	26.1	0.0	1.8	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA_CoxE	PF05762.9	gi|15920717|ref|NP_376386.1|	-	3.6e-06	26.2	0.0	6.6e-06	25.4	0.0	1.4	1	0	0	1	1	1	1	VWA	domain	containing	CoxE-like	protein
PP2C_2	PF13672.1	gi|15920717|ref|NP_376386.1|	-	0.0067	15.8	1.4	2.8	7.3	0.0	2.6	2	1	1	3	3	3	2	Protein	phosphatase	2C
AAA_5	PF07728.9	gi|15920718|ref|NP_376387.1|	-	2.9e-28	98.3	0.0	6e-28	97.3	0.0	1.5	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.1	gi|15920718|ref|NP_376387.1|	-	2.7e-06	27.4	0.1	8.9e-06	25.8	0.0	2.0	1	1	1	2	2	2	1	AAA	ATPase	domain
AAA_3	PF07726.6	gi|15920718|ref|NP_376387.1|	-	6.3e-05	22.5	0.0	0.0001	21.8	0.0	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.1	gi|15920718|ref|NP_376387.1|	-	6.8e-05	23.0	0.7	0.00048	20.2	0.0	2.6	2	2	0	2	2	2	1	AAA	domain
Mg_chelatase	PF01078.16	gi|15920718|ref|NP_376387.1|	-	7.7e-05	21.9	0.1	0.00065	18.9	0.0	2.1	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA	PF00004.24	gi|15920718|ref|NP_376387.1|	-	9.4e-05	22.6	0.0	0.00029	21.0	0.0	1.9	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_17	PF13207.1	gi|15920718|ref|NP_376387.1|	-	0.0014	19.4	0.2	0.01	16.6	0.1	2.5	1	1	0	1	1	1	1	AAA	domain
MCM	PF00493.18	gi|15920718|ref|NP_376387.1|	-	0.0015	17.4	0.0	0.0048	15.7	0.0	1.8	2	0	0	2	2	2	1	MCM2/3/5	family
Sigma54_activat	PF00158.21	gi|15920718|ref|NP_376387.1|	-	0.0018	17.7	0.0	0.006	16.0	0.0	1.8	1	1	0	1	1	1	1	Sigma-54	interaction	domain
PMC2NT	PF08066.7	gi|15920718|ref|NP_376387.1|	-	0.015	15.5	0.1	0.035	14.3	0.1	1.7	1	0	0	1	1	1	0	PMC2NT	(NUC016)	domain
AAA_19	PF13245.1	gi|15920718|ref|NP_376387.1|	-	0.061	13.0	0.0	0.12	12.1	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_18	PF13238.1	gi|15920718|ref|NP_376387.1|	-	1.8	8.8	5.2	2.6	8.3	0.1	2.9	1	1	1	3	3	3	0	AAA	domain
tRNA_anti-codon	PF01336.20	gi|15920719|ref|NP_376388.1|	-	2.3e-07	30.5	0.3	3.4e-07	30.0	0.2	1.3	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
POT1	PF02765.12	gi|15920719|ref|NP_376388.1|	-	0.16	11.9	0.1	0.3	10.9	0.1	1.6	1	1	0	1	1	1	0	Telomeric	single	stranded	DNA	binding	POT1/CDC13
PqqD	PF05402.7	gi|15920720|ref|NP_376389.1|	-	8.8e-13	48.0	0.1	1.1e-12	47.7	0.1	1.1	1	0	0	1	1	1	1	Coenzyme	PQQ	synthesis	protein	D	(PqqD)
DUF4569	PF15133.1	gi|15920720|ref|NP_376389.1|	-	0.00051	19.5	0.7	0.00066	19.1	0.5	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4569)
MoeA_N	PF03453.12	gi|15920721|ref|NP_376390.1|	-	4.2e-43	146.4	0.0	7e-43	145.7	0.0	1.4	1	0	0	1	1	1	1	MoeA	N-terminal	region	(domain	I	and	II)
MoCF_biosynth	PF00994.19	gi|15920721|ref|NP_376390.1|	-	1.5e-31	108.7	0.1	2.6e-31	107.9	0.0	1.3	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
MoeA_C	PF03454.10	gi|15920721|ref|NP_376390.1|	-	1.4e-11	44.1	0.0	5.5e-11	42.2	0.0	2.1	2	0	0	2	2	2	1	MoeA	C-terminal	region	(domain	IV)
GHMP_kinases_N	PF00288.21	gi|15920722|ref|NP_376391.1|	-	2.6e-16	59.4	1.6	2.6e-16	59.4	1.1	2.2	2	0	0	2	2	2	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|15920722|ref|NP_376391.1|	-	1.9e-07	31.1	0.6	5.5e-07	29.6	0.0	2.0	2	0	0	2	2	2	1	GHMP	kinases	C	terminal
Cys_Met_Meta_PP	PF01053.15	gi|15920723|ref|NP_376392.1|	-	6.3e-123	409.8	0.1	7.5e-123	409.6	0.0	1.0	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Aminotran_1_2	PF00155.16	gi|15920723|ref|NP_376392.1|	-	4.5e-08	32.4	0.0	8.9e-08	31.4	0.0	1.4	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.14	gi|15920723|ref|NP_376392.1|	-	0.0011	17.7	0.0	0.008	14.9	0.0	2.0	2	0	0	2	2	2	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.16	gi|15920723|ref|NP_376392.1|	-	0.0013	17.9	0.0	0.007	15.5	0.0	1.9	1	1	0	1	1	1	1	Beta-eliminating	lyase
DegT_DnrJ_EryC1	PF01041.12	gi|15920723|ref|NP_376392.1|	-	0.059	12.3	0.0	0.18	10.8	0.0	1.7	2	0	0	2	2	2	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
zf-C2H2_4	PF13894.1	gi|15920724|ref|NP_376393.1|	-	0.029	14.6	0.1	0.047	14.0	0.1	1.3	1	0	0	1	1	1	0	C2H2-type	zinc	finger
DUF1152	PF06626.7	gi|15920726|ref|NP_376395.1|	-	2.4e-109	365.0	0.0	2.8e-109	364.8	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1152)
Hjc	PF01870.13	gi|15920727|ref|NP_376396.1|	-	0.026	14.1	0.0	0.058	13.0	0.0	1.6	2	0	0	2	2	2	0	Archaeal	holliday	junction	resolvase	(hjc)
DUF3883	PF13020.1	gi|15920727|ref|NP_376396.1|	-	0.043	13.5	0.2	0.12	12.1	0.1	1.7	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3883)
DUF4138	PF13595.1	gi|15920727|ref|NP_376396.1|	-	0.062	12.2	0.0	0.085	11.7	0.0	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4138)
Lumazine_bd	PF12870.2	gi|15920727|ref|NP_376396.1|	-	0.062	13.3	0.1	0.18	11.8	0.0	1.8	2	1	0	2	2	2	0	Lumazine-binding	domain
KH_1	PF00013.24	gi|15920728|ref|NP_376397.1|	-	2.9e-06	26.8	16.2	3.6e-06	26.5	5.0	2.7	3	1	0	3	3	3	2	KH	domain
KH_3	PF13014.1	gi|15920728|ref|NP_376397.1|	-	4.9e-05	22.8	5.8	0.0015	18.1	2.1	2.6	2	0	0	2	2	2	2	KH	domain
RIO1	PF01163.17	gi|15920729|ref|NP_376398.1|	-	9.5e-45	152.2	0.8	1.1e-44	152.0	0.5	1.0	1	0	0	1	1	1	1	RIO1	family
APH	PF01636.18	gi|15920729|ref|NP_376398.1|	-	3e-05	23.8	0.0	4e-05	23.4	0.0	1.2	1	0	0	1	1	1	1	Phosphotransferase	enzyme	family
Kdo	PF06293.9	gi|15920729|ref|NP_376398.1|	-	0.0077	15.3	0.0	0.009	15.0	0.0	1.1	1	0	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
Fructosamin_kin	PF03881.9	gi|15920729|ref|NP_376398.1|	-	0.047	12.6	0.0	0.057	12.3	0.0	1.3	1	1	0	1	1	1	0	Fructosamine	kinase
Rib_5-P_isom_A	PF06026.9	gi|15920729|ref|NP_376398.1|	-	0.062	12.5	0.1	0.076	12.3	0.1	1.2	1	0	0	1	1	1	0	Ribose	5-phosphate	isomerase	A	(phosphoriboisomerase	A)
Sigma70_r1_1	PF03979.9	gi|15920729|ref|NP_376398.1|	-	2.4	8.1	8.3	5.8	6.9	0.1	2.7	3	1	0	3	3	3	0	Sigma-70	factor,	region	1.1
eIF-1a	PF01176.14	gi|15920730|ref|NP_376399.1|	-	6.7e-22	76.6	0.1	1.1e-21	76.0	0.1	1.3	1	0	0	1	1	1	1	Translation	initiation	factor	1A	/	IF-1
Thiolase_N	PF00108.18	gi|15920731|ref|NP_376400.1|	-	7.2e-87	290.7	1.5	9.1e-87	290.3	1.0	1.1	1	0	0	1	1	1	1	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.13	gi|15920731|ref|NP_376400.1|	-	7.1e-37	125.5	0.0	5.4e-36	122.7	0.0	2.1	2	0	0	2	2	2	1	Thiolase,	C-terminal	domain
ketoacyl-synt	PF00109.21	gi|15920731|ref|NP_376400.1|	-	4.9e-07	29.4	3.6	3.8e-06	26.5	2.1	2.1	1	1	1	2	2	2	1	Beta-ketoacyl	synthase,	N-terminal	domain
SpoVAD	PF07451.6	gi|15920731|ref|NP_376400.1|	-	0.017	13.6	0.3	0.046	12.1	0.1	1.7	2	0	0	2	2	2	0	Stage	V	sporulation	protein	AD	(SpoVAD)
ACP_syn_III	PF08545.5	gi|15920731|ref|NP_376400.1|	-	0.28	10.8	1.7	0.87	9.2	0.5	2.0	2	0	0	2	2	2	0	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Radical_SAM	PF04055.16	gi|15920732|ref|NP_376401.1|	-	4.4e-29	101.7	0.5	4e-28	98.6	0.2	2.3	2	0	0	2	2	2	1	Radical	SAM	superfamily
UPF0004	PF00919.15	gi|15920732|ref|NP_376401.1|	-	1.5e-22	79.2	0.1	3.4e-22	78.1	0.1	1.6	1	0	0	1	1	1	1	Uncharacterized	protein	family	UPF0004
TRAM	PF01938.15	gi|15920732|ref|NP_376401.1|	-	5.4e-10	38.9	0.0	1.1e-09	37.9	0.0	1.6	1	0	0	1	1	1	1	TRAM	domain
eIF-5_eIF-2B	PF01873.12	gi|15920733|ref|NP_376402.1|	-	7e-32	109.7	0.3	8.9e-32	109.3	0.2	1.1	1	0	0	1	1	1	1	Domain	found	in	IF2B/IF5
DUF2387	PF09526.5	gi|15920733|ref|NP_376402.1|	-	0.01	15.7	0.3	0.016	15.1	0.2	1.3	1	0	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
Cys_rich_KTR	PF14205.1	gi|15920733|ref|NP_376402.1|	-	0.012	15.0	5.9	0.27	10.7	0.1	3.0	2	1	1	3	3	3	0	Cysteine-rich	KTR
DUF4003	PF13170.1	gi|15920733|ref|NP_376402.1|	-	0.036	13.3	0.1	0.054	12.7	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4003)
Elf1	PF05129.8	gi|15920733|ref|NP_376402.1|	-	0.08	12.6	0.7	0.15	11.7	0.5	1.5	1	0	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
DUF424	PF04242.8	gi|15920734|ref|NP_376403.1|	-	1.3e-24	86.0	0.8	1.5e-24	85.8	0.5	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF424)
NMD3	PF04981.8	gi|15920735|ref|NP_376404.1|	-	7.8e-45	152.8	2.9	9e-45	152.6	2.0	1.0	1	0	0	1	1	1	1	NMD3	family
Baculo_RING	PF05883.6	gi|15920735|ref|NP_376404.1|	-	0.048	13.4	0.5	3.5	7.4	0.0	2.4	2	0	0	2	2	2	0	Baculovirus	U-box/Ring-like	domain
DUF4428	PF14471.1	gi|15920735|ref|NP_376404.1|	-	0.11	12.2	11.6	0.2	11.4	0.8	4.2	3	1	1	4	4	4	0	Domain	of	unknown	function	(DUF4428)
Nudix_N_2	PF14803.1	gi|15920735|ref|NP_376404.1|	-	0.12	12.1	3.1	27	4.5	0.0	3.4	3	0	0	3	3	3	0	Nudix	N-terminal
FYVE	PF01363.16	gi|15920735|ref|NP_376404.1|	-	0.3	11.0	2.4	1.8	8.5	0.9	2.2	2	0	0	2	2	2	0	FYVE	zinc	finger
RNase_HII	PF01351.13	gi|15920736|ref|NP_376405.1|	-	6.2e-46	156.5	0.0	7e-46	156.3	0.0	1.0	1	0	0	1	1	1	1	Ribonuclease	HII
TGS	PF02824.16	gi|15920737|ref|NP_376406.1|	-	7.2e-23	80.1	0.0	1.4e-22	79.2	0.0	1.5	1	0	0	1	1	1	1	TGS	domain
YchF-GTPase_C	PF06071.8	gi|15920737|ref|NP_376406.1|	-	0.012	15.4	0.2	0.88	9.3	0.1	2.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF933)
T2SF	PF00482.18	gi|15920738|ref|NP_376407.1|	-	7.6e-15	54.9	2.6	3.5e-09	36.6	0.3	5.1	6	0	0	6	6	6	3	Type	II	secretion	system	(T2SS),	protein	F
T2SE	PF00437.15	gi|15920739|ref|NP_376408.1|	-	6.4e-47	159.7	0.0	9.9e-47	159.1	0.0	1.4	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
SRP54	PF00448.17	gi|15920739|ref|NP_376408.1|	-	0.019	14.3	0.0	0.034	13.5	0.0	1.4	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
Viral_helicase1	PF01443.13	gi|15920739|ref|NP_376408.1|	-	0.027	13.9	0.0	0.044	13.3	0.0	1.3	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
MobB	PF03205.9	gi|15920739|ref|NP_376408.1|	-	0.035	13.8	0.1	0.074	12.7	0.1	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ABC_tran	PF00005.22	gi|15920739|ref|NP_376408.1|	-	0.042	14.1	0.0	0.18	12.0	0.0	1.9	2	0	0	2	2	2	0	ABC	transporter
DUF4230	PF14014.1	gi|15920739|ref|NP_376408.1|	-	0.056	13.3	0.8	0.59	9.9	0.1	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4230)
AAA_30	PF13604.1	gi|15920739|ref|NP_376408.1|	-	0.071	12.6	0.0	0.13	11.8	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
cobW	PF02492.14	gi|15920739|ref|NP_376408.1|	-	0.087	12.2	0.2	0.16	11.3	0.1	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
DUF87	PF01935.12	gi|15920739|ref|NP_376408.1|	-	0.18	11.5	1.8	0.48	10.1	1.0	1.9	1	1	0	1	1	1	0	Domain	of	unknown	function	DUF87
Glyco_tranf_2_3	PF13641.1	gi|15920740|ref|NP_376409.1|	-	2.6e-32	112.4	0.0	3.3e-32	112.1	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|15920740|ref|NP_376409.1|	-	1e-24	87.3	0.2	1.9e-24	86.4	0.2	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glycos_transf_2	PF00535.21	gi|15920740|ref|NP_376409.1|	-	3.4e-23	82.1	0.7	5.5e-23	81.4	0.5	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.4	gi|15920740|ref|NP_376409.1|	-	6.7e-17	61.4	2.3	1.1e-16	60.7	1.6	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_transf_21	PF13506.1	gi|15920740|ref|NP_376409.1|	-	9.6e-13	47.7	0.0	3.7e-12	45.8	0.0	1.8	2	0	0	2	2	2	1	Glycosyl	transferase	family	21
Glyco_tranf_2_5	PF13712.1	gi|15920740|ref|NP_376409.1|	-	0.0029	16.8	0.1	0.0096	15.1	0.0	1.9	2	1	1	3	3	3	1	Glycosyltransferase	like	family
ATP-synt_F	PF01990.12	gi|15920740|ref|NP_376409.1|	-	0.26	11.6	1.6	0.31	11.4	0.1	1.8	2	0	0	2	2	2	0	ATP	synthase	(F/14-kDa)	subunit
Pyrophosphatase	PF00719.14	gi|15920741|ref|NP_376410.1|	-	4.5e-61	204.8	0.1	5.1e-61	204.6	0.1	1.0	1	0	0	1	1	1	1	Inorganic	pyrophosphatase
HD_3	PF13023.1	gi|15920742|ref|NP_376411.1|	-	1.2e-17	64.1	0.0	5.6e-17	61.9	0.0	1.8	1	1	0	1	1	1	1	HD	domain
HD	PF01966.17	gi|15920742|ref|NP_376411.1|	-	1.8e-08	34.4	0.8	5.7e-08	32.8	0.1	2.1	2	1	0	2	2	2	1	HD	domain
HDOD	PF08668.7	gi|15920742|ref|NP_376411.1|	-	0.00051	19.3	0.0	0.0008	18.7	0.0	1.3	1	0	0	1	1	1	1	HDOD	domain
ScpA_ScpB	PF02616.9	gi|15920742|ref|NP_376411.1|	-	0.00064	19.3	1.9	0.00077	19.1	1.3	1.2	1	0	0	1	1	1	1	ScpA/B	protein
DUF2802	PF10975.3	gi|15920742|ref|NP_376411.1|	-	0.054	13.2	0.1	0.42	10.4	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2802)
Phos_pyr_kin	PF08543.7	gi|15920743|ref|NP_376412.1|	-	1.1e-71	240.9	0.1	1.4e-71	240.5	0.1	1.1	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
Aldolase_2	PF10120.4	gi|15920743|ref|NP_376412.1|	-	1.4e-56	190.5	0.0	2.9e-56	189.4	0.0	1.6	1	0	0	1	1	1	1	Putative	aldolase
PfkB	PF00294.19	gi|15920743|ref|NP_376412.1|	-	2.1e-07	30.3	0.0	3.3e-07	29.7	0.0	1.2	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Carb_kinase	PF01256.12	gi|15920743|ref|NP_376412.1|	-	0.085	12.1	0.0	0.14	11.3	0.0	1.4	1	0	0	1	1	1	0	Carbohydrate	kinase
MoaE	PF02391.12	gi|15920744|ref|NP_376413.1|	-	4e-18	65.3	0.1	6.6e-18	64.6	0.1	1.3	1	0	0	1	1	1	1	MoaE	protein
ThiS	PF02597.15	gi|15920744|ref|NP_376413.1|	-	1.9e-10	41.0	0.0	6.2e-10	39.3	0.0	1.9	2	0	0	2	2	2	1	ThiS	family
Fer4_8	PF13183.1	gi|15920746|ref|NP_376415.1|	-	6.4e-07	29.3	3.2	1.2e-06	28.4	2.2	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
FAD_binding_4	PF01565.18	gi|15920746|ref|NP_376415.1|	-	2.1e-06	27.2	0.0	5.3e-06	25.9	0.0	1.6	1	1	0	1	1	1	1	FAD	binding	domain
Fer4_7	PF12838.2	gi|15920746|ref|NP_376415.1|	-	6.8e-06	26.3	4.2	1.5e-05	25.3	2.9	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|15920746|ref|NP_376415.1|	-	2.1e-05	24.7	2.5	4.6e-05	23.6	1.7	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|15920746|ref|NP_376415.1|	-	4e-05	23.9	0.8	0.12	12.7	0.0	2.7	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|15920746|ref|NP_376415.1|	-	0.00025	20.8	4.4	0.00025	20.8	3.0	1.9	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|15920746|ref|NP_376415.1|	-	0.0014	18.8	6.5	0.0077	16.4	4.7	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|15920746|ref|NP_376415.1|	-	0.0033	17.1	6.4	0.03	14.1	4.9	2.1	1	1	1	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|15920746|ref|NP_376415.1|	-	0.026	14.4	1.7	0.026	14.4	1.1	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
DUF3944	PF13099.1	gi|15920746|ref|NP_376415.1|	-	0.049	13.1	0.6	0.11	11.9	0.4	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3944)
Fer4	PF00037.22	gi|15920746|ref|NP_376415.1|	-	0.86	9.3	14.8	0.021	14.4	2.1	3.1	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|15920746|ref|NP_376415.1|	-	1.2	9.9	6.3	6.6	7.5	4.4	2.3	1	1	0	1	1	1	0	4Fe-4S	double	cluster	binding	domain
Fer4_6	PF12837.2	gi|15920746|ref|NP_376415.1|	-	1.3	9.0	9.5	0.042	13.7	1.1	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|15920746|ref|NP_376415.1|	-	2.3	8.7	9.1	0.24	11.8	1.7	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
GHMP_kinases_N	PF00288.21	gi|15920747|ref|NP_376416.1|	-	1.1e-07	31.8	0.1	1.7e-07	31.1	0.1	1.3	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
DUF137	PF02006.11	gi|15920748|ref|NP_376417.1|	-	5.5e-82	273.4	4.7	6.6e-82	273.2	3.3	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF137
Arabinose_Isome	PF02610.10	gi|15920748|ref|NP_376417.1|	-	0.12	11.3	0.6	0.18	10.7	0.1	1.4	2	0	0	2	2	2	0	L-arabinose	isomerase
Pantoate_transf	PF02548.10	gi|15920749|ref|NP_376418.1|	-	7.3e-109	362.8	0.0	8.3e-109	362.7	0.0	1.0	1	0	0	1	1	1	1	Ketopantoate	hydroxymethyltransferase
PEP_mutase	PF13714.1	gi|15920749|ref|NP_376418.1|	-	3.4e-08	32.9	0.3	2.4e-06	26.9	0.2	2.8	1	1	0	1	1	1	1	Phosphoenolpyruvate	phosphomutase
ABC_tran	PF00005.22	gi|15920751|ref|NP_376420.1|	-	6.5e-26	91.2	0.0	9.4e-26	90.7	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|15920751|ref|NP_376420.1|	-	4.3e-11	43.3	0.2	7.1e-09	36.0	0.2	2.2	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|15920751|ref|NP_376420.1|	-	0.00024	20.3	1.1	0.063	12.5	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|15920751|ref|NP_376420.1|	-	0.0005	19.2	0.0	0.054	12.5	0.0	2.3	1	1	1	2	2	2	1	AAA	ATPase	domain
AAA_23	PF13476.1	gi|15920751|ref|NP_376420.1|	-	0.001	19.4	3.1	0.0016	18.8	2.2	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|15920751|ref|NP_376420.1|	-	0.0023	17.4	0.1	0.98	8.7	0.0	2.1	2	0	0	2	2	2	2	AAA-like	domain
AAA_30	PF13604.1	gi|15920751|ref|NP_376420.1|	-	0.0039	16.7	0.1	0.0065	16.0	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|15920751|ref|NP_376420.1|	-	0.0085	15.6	0.1	0.017	14.6	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
Peptidase_M23	PF01551.17	gi|15920751|ref|NP_376420.1|	-	0.013	15.5	0.1	25	5.0	0.0	3.1	2	1	0	3	3	3	0	Peptidase	family	M23
AAA	PF00004.24	gi|15920751|ref|NP_376420.1|	-	0.027	14.6	0.0	0.043	14.0	0.0	1.5	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
SRP54	PF00448.17	gi|15920751|ref|NP_376420.1|	-	0.035	13.5	0.1	0.059	12.8	0.1	1.3	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
UPF0079	PF02367.12	gi|15920751|ref|NP_376420.1|	-	0.041	13.5	0.1	0.084	12.5	0.1	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_22	PF13401.1	gi|15920751|ref|NP_376420.1|	-	0.06	13.5	0.5	0.29	11.2	0.3	2.0	1	1	0	1	1	1	0	AAA	domain
ATP_bind_1	PF03029.12	gi|15920751|ref|NP_376420.1|	-	0.099	12.1	0.1	0.17	11.3	0.1	1.3	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
AAA_17	PF13207.1	gi|15920751|ref|NP_376420.1|	-	0.11	13.2	0.2	0.19	12.5	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_19	PF13245.1	gi|15920751|ref|NP_376420.1|	-	0.12	12.1	0.4	0.26	11.0	0.3	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_25	PF13481.1	gi|15920751|ref|NP_376420.1|	-	0.17	11.2	0.2	3.4	7.0	0.1	2.1	2	0	0	2	2	2	0	AAA	domain
ABC2_membrane_3	PF12698.2	gi|15920752|ref|NP_376421.1|	-	3.6e-19	69.0	49.2	4.6e-19	68.6	34.1	1.1	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.2	gi|15920752|ref|NP_376421.1|	-	1.9e-07	30.2	36.1	6.5e-06	25.2	25.0	2.9	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|15920752|ref|NP_376421.1|	-	0.0014	17.8	66.5	0.047	12.8	46.2	2.4	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
DUF4112	PF13430.1	gi|15920752|ref|NP_376421.1|	-	0.41	10.5	5.4	0.17	11.8	1.3	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4112)
AsnC_trans_reg	PF01037.16	gi|15920753|ref|NP_376422.1|	-	5e-12	45.3	0.3	5.5e-12	45.2	0.2	1.0	1	0	0	1	1	1	1	AsnC	family
ACT_4	PF13291.1	gi|15920753|ref|NP_376422.1|	-	0.037	14.3	0.8	0.38	11.1	0.2	2.0	1	1	1	2	2	2	0	ACT	domain
CRA	PF06589.6	gi|15920753|ref|NP_376422.1|	-	0.12	11.7	0.4	0.12	11.7	0.3	1.0	1	0	0	1	1	1	0	Circumsporozoite-related	antigen	(CRA)
RHH_1	PF01402.16	gi|15920754|ref|NP_376423.1|	-	6.7e-11	41.5	0.4	9.7e-11	41.0	0.3	1.3	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
RHH_3	PF12651.2	gi|15920754|ref|NP_376423.1|	-	6.8e-05	22.5	0.5	9.4e-05	22.0	0.3	1.3	1	0	0	1	1	1	1	Ribbon-helix-helix	domain
Lactamase_B_3	PF13483.1	gi|15920755|ref|NP_376424.1|	-	7.7e-33	113.5	0.1	9.3e-33	113.2	0.1	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.2	gi|15920755|ref|NP_376424.1|	-	1e-12	48.0	1.2	3.9e-06	26.5	0.0	2.1	1	1	1	2	2	2	2	Beta-lactamase	superfamily	domain
DUF3627	PF12299.3	gi|15920755|ref|NP_376424.1|	-	0.076	13.0	0.1	0.25	11.4	0.0	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3627)
HMGL-like	PF00682.14	gi|15920756|ref|NP_376425.1|	-	1.8e-81	273.2	1.6	2.5e-81	272.8	1.1	1.2	1	0	0	1	1	1	1	HMGL-like
MAF_flag10	PF01973.13	gi|15920757|ref|NP_376426.1|	-	3.7e-30	104.6	0.8	5.2e-30	104.1	0.5	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF115
TPK_catalytic	PF04263.11	gi|15920757|ref|NP_376426.1|	-	0.00023	20.7	0.1	0.006	16.1	0.0	2.3	2	0	0	2	2	2	1	Thiamin	pyrophosphokinase,	catalytic	domain
Vps16_N	PF04841.8	gi|15920757|ref|NP_376426.1|	-	0.058	11.9	0.1	0.075	11.5	0.1	1.1	1	0	0	1	1	1	0	Vps16,	N-terminal	region
DUF565	PF04483.7	gi|15920758|ref|NP_376427.1|	-	0.17	12.0	5.3	0.26	11.4	3.7	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF565)
HEPN	PF05168.9	gi|15920759|ref|NP_376428.1|	-	1.3e-05	25.0	1.4	1.7e-05	24.7	1.0	1.1	1	0	0	1	1	1	1	HEPN	domain
AAA_5	PF07728.9	gi|15920759|ref|NP_376428.1|	-	0.1	12.3	0.0	0.4	10.4	0.0	1.9	1	1	1	2	2	2	0	AAA	domain	(dynein-related	subfamily)
Cyc-maltodext_C	PF10438.4	gi|15920761|ref|NP_376430.1|	-	0.034	14.2	1.1	2.7	8.1	0.2	2.3	2	0	0	2	2	2	0	Cyclo-malto-dextrinase	C-terminal	domain
Arg_repressor	PF01316.16	gi|15920761|ref|NP_376430.1|	-	0.067	12.7	1.1	0.51	9.9	0.1	2.3	2	0	0	2	2	2	0	Arginine	repressor,	DNA	binding	domain
PTPS	PF01242.14	gi|15920762|ref|NP_376431.1|	-	6.9e-25	87.1	0.0	8.3e-25	86.8	0.0	1.0	1	0	0	1	1	1	1	6-pyruvoyl	tetrahydropterin	synthase
DUF512	PF04459.7	gi|15920764|ref|NP_376433.1|	-	1.3e-05	24.3	0.1	2.4e-05	23.4	0.1	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF512)
DUF4346	PF14251.1	gi|15920764|ref|NP_376433.1|	-	7.2e-05	22.5	0.0	0.00016	21.3	0.0	1.7	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4346)
Pterin_bind	PF00809.17	gi|15920764|ref|NP_376433.1|	-	0.0049	16.2	0.0	0.013	14.8	0.0	1.7	1	0	0	1	1	1	1	Pterin	binding	enzyme
CdhD	PF03599.11	gi|15920764|ref|NP_376433.1|	-	0.01	14.3	0.4	0.34	9.3	0.1	2.2	2	0	0	2	2	2	0	CO	dehydrogenase/acetyl-CoA	synthase	delta	subunit
Pyr_redox_2	PF07992.9	gi|15920765|ref|NP_376434.1|	-	3.5e-33	115.1	0.6	4.8e-33	114.7	0.4	1.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|15920765|ref|NP_376434.1|	-	7.9e-16	58.2	0.8	1.2e-14	54.4	0.1	2.7	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|15920765|ref|NP_376434.1|	-	3.3e-14	53.4	0.0	1.4e-13	51.4	0.0	2.1	2	1	1	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|15920765|ref|NP_376434.1|	-	6e-09	35.2	2.5	0.029	13.2	0.1	4.0	3	1	0	4	4	4	3	Glucose	inhibited	division	protein	A
K_oxygenase	PF13434.1	gi|15920765|ref|NP_376434.1|	-	6.5e-08	31.8	0.0	0.0019	17.1	0.0	3.1	2	1	1	3	3	3	3	L-lysine	6-monooxygenase	(NADPH-requiring)
HI0933_like	PF03486.9	gi|15920765|ref|NP_376434.1|	-	1.3e-05	23.8	0.7	0.014	13.8	0.0	3.1	3	0	0	3	3	3	1	HI0933-like	protein
FAD_binding_2	PF00890.19	gi|15920765|ref|NP_376434.1|	-	0.0001	21.3	3.1	0.13	11.0	0.0	3.6	3	1	2	5	5	5	2	FAD	binding	domain
Thi4	PF01946.12	gi|15920765|ref|NP_376434.1|	-	0.00015	20.9	0.9	0.29	10.2	0.0	2.9	3	0	0	3	3	3	2	Thi4	family
FAD_oxidored	PF12831.2	gi|15920765|ref|NP_376434.1|	-	0.00038	19.6	0.7	0.0044	16.1	0.0	2.4	2	1	1	3	3	3	1	FAD	dependent	oxidoreductase
NAD_binding_7	PF13241.1	gi|15920765|ref|NP_376434.1|	-	0.0008	19.6	0.6	0.03	14.5	0.1	2.4	2	0	0	2	2	2	1	Putative	NAD(P)-binding
DAO	PF01266.19	gi|15920765|ref|NP_376434.1|	-	0.0045	15.9	0.9	0.086	11.7	0.1	2.6	2	1	0	2	2	2	1	FAD	dependent	oxidoreductase
Lycopene_cycl	PF05834.7	gi|15920765|ref|NP_376434.1|	-	0.0067	15.3	0.1	1.1	8.0	0.0	2.9	2	1	1	3	3	3	1	Lycopene	cyclase	protein
NAD_binding_9	PF13454.1	gi|15920765|ref|NP_376434.1|	-	0.017	14.9	0.2	3.3	7.4	0.0	3.1	3	0	0	3	3	3	0	FAD-NAD(P)-binding
FMO-like	PF00743.14	gi|15920765|ref|NP_376434.1|	-	0.021	13.0	0.0	0.027	12.6	0.0	1.2	1	0	0	1	1	1	0	Flavin-binding	monooxygenase-like
Shikimate_DH	PF01488.15	gi|15920765|ref|NP_376434.1|	-	0.077	13.0	0.1	0.4	10.7	0.0	2.1	2	0	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
FAD_binding_3	PF01494.14	gi|15920765|ref|NP_376434.1|	-	0.094	11.7	0.0	1.1	8.2	0.0	2.1	2	0	0	2	2	2	0	FAD	binding	domain
Inositol_P	PF00459.20	gi|15920766|ref|NP_376435.1|	-	3e-23	82.4	0.0	3.7e-23	82.2	0.0	1.1	1	0	0	1	1	1	1	Inositol	monophosphatase	family
FBPase	PF00316.15	gi|15920766|ref|NP_376435.1|	-	0.00011	21.1	0.0	0.00015	20.7	0.0	1.2	1	0	0	1	1	1	1	Fructose-1-6-bisphosphatase
AAA	PF00004.24	gi|15920767|ref|NP_376436.1|	-	4.6e-84	279.2	0.0	4e-41	140.3	0.0	2.5	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_17	PF13207.1	gi|15920767|ref|NP_376436.1|	-	8.7e-18	65.2	0.1	8.8e-08	32.9	0.0	3.5	2	2	1	3	3	2	2	AAA	domain
AAA_22	PF13401.1	gi|15920767|ref|NP_376436.1|	-	1.6e-14	54.1	1.0	0.00034	20.7	0.0	5.1	3	2	1	4	4	3	2	AAA	domain
AAA_14	PF13173.1	gi|15920767|ref|NP_376436.1|	-	3.3e-14	52.8	0.0	4.8e-07	29.7	0.0	2.8	2	0	0	2	2	2	2	AAA	domain
AAA_2	PF07724.9	gi|15920767|ref|NP_376436.1|	-	1.5e-13	50.9	0.3	4.1e-06	26.8	0.0	3.2	4	0	0	4	4	2	2	AAA	domain	(Cdc48	subfamily)
AAA_5	PF07728.9	gi|15920767|ref|NP_376436.1|	-	3e-12	46.4	0.5	2e-05	24.3	0.3	3.7	2	2	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
RuvB_N	PF05496.7	gi|15920767|ref|NP_376436.1|	-	1.6e-11	43.6	0.0	1.2e-05	24.4	0.0	2.5	2	0	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_16	PF13191.1	gi|15920767|ref|NP_376436.1|	-	1.5e-10	41.3	0.2	0.0015	18.5	0.0	3.8	3	2	1	4	4	3	2	AAA	ATPase	domain
AAA_18	PF13238.1	gi|15920767|ref|NP_376436.1|	-	6e-10	39.5	0.0	0.00021	21.5	0.0	3.0	2	1	0	2	2	2	2	AAA	domain
RNA_helicase	PF00910.17	gi|15920767|ref|NP_376436.1|	-	3e-09	37.0	0.0	0.0034	17.5	0.0	3.2	2	0	0	2	2	2	2	RNA	helicase
AAA_33	PF13671.1	gi|15920767|ref|NP_376436.1|	-	1.1e-08	35.0	0.0	0.0057	16.5	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
IstB_IS21	PF01695.12	gi|15920767|ref|NP_376436.1|	-	1.4e-08	34.3	0.0	0.0024	17.3	0.1	2.6	2	1	0	2	2	2	2	IstB-like	ATP	binding	protein
Vps4_C	PF09336.5	gi|15920767|ref|NP_376436.1|	-	1.5e-08	34.4	0.2	0.0011	18.8	0.0	3.3	3	0	0	3	3	2	2	Vps4	C	terminal	oligomerisation	domain
NACHT	PF05729.7	gi|15920767|ref|NP_376436.1|	-	1.9e-08	34.1	0.1	0.089	12.4	0.0	4.0	2	2	2	4	4	4	3	NACHT	domain
AAA_25	PF13481.1	gi|15920767|ref|NP_376436.1|	-	4.1e-08	32.8	1.5	0.16	11.3	0.1	3.4	2	1	1	3	3	3	3	AAA	domain
TIP49	PF06068.8	gi|15920767|ref|NP_376436.1|	-	1.6e-07	30.3	0.0	0.001	17.8	0.0	2.5	2	0	0	2	2	2	2	TIP49	C-terminus
AAA_28	PF13521.1	gi|15920767|ref|NP_376436.1|	-	3.6e-07	30.2	0.0	0.013	15.4	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
Mg_chelatase	PF01078.16	gi|15920767|ref|NP_376436.1|	-	2e-06	27.1	2.9	0.0042	16.2	0.2	2.4	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
DUF815	PF05673.8	gi|15920767|ref|NP_376436.1|	-	3e-06	26.3	0.0	0.032	13.1	0.0	2.6	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
Zeta_toxin	PF06414.7	gi|15920767|ref|NP_376436.1|	-	3.6e-06	26.2	0.0	0.011	14.8	0.0	2.8	2	0	0	2	2	2	2	Zeta	toxin
Rad17	PF03215.10	gi|15920767|ref|NP_376436.1|	-	1.4e-05	24.0	0.0	0.045	12.4	0.0	2.4	2	0	0	2	2	2	2	Rad17	cell	cycle	checkpoint	protein
AAA_3	PF07726.6	gi|15920767|ref|NP_376436.1|	-	2.1e-05	24.1	0.0	0.039	13.5	0.1	3.0	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
ABC_tran	PF00005.22	gi|15920767|ref|NP_376436.1|	-	5.3e-05	23.5	0.1	0.22	11.8	0.0	3.3	2	1	0	2	2	2	1	ABC	transporter
Arch_ATPase	PF01637.13	gi|15920767|ref|NP_376436.1|	-	6.4e-05	22.7	10.1	0.048	13.3	0.0	5.5	2	2	3	6	6	6	1	Archaeal	ATPase
AAA_24	PF13479.1	gi|15920767|ref|NP_376436.1|	-	0.00015	21.4	5.8	0.0024	17.5	0.2	3.5	4	0	0	4	4	3	1	AAA	domain
Sigma54_activat	PF00158.21	gi|15920767|ref|NP_376436.1|	-	0.00017	21.1	0.0	0.77	9.2	0.0	3.3	3	1	0	3	3	3	2	Sigma-54	interaction	domain
MCM	PF00493.18	gi|15920767|ref|NP_376436.1|	-	0.0002	20.2	0.5	0.082	11.6	0.0	2.7	3	0	0	3	3	2	1	MCM2/3/5	family
AAA_10	PF12846.2	gi|15920767|ref|NP_376436.1|	-	0.00025	20.5	1.1	1	8.7	0.0	3.7	2	2	1	3	3	3	1	AAA-like	domain
AAA_19	PF13245.1	gi|15920767|ref|NP_376436.1|	-	0.00025	20.7	0.0	0.16	11.7	0.0	2.5	2	0	0	2	2	2	1	Part	of	AAA	domain
MMR_HSR1	PF01926.18	gi|15920767|ref|NP_376436.1|	-	0.00033	20.6	0.2	0.1	12.5	0.0	3.7	4	1	1	5	5	2	1	50S	ribosome-binding	GTPase
ResIII	PF04851.10	gi|15920767|ref|NP_376436.1|	-	0.00035	20.4	0.6	0.61	9.8	0.0	3.3	4	1	0	4	4	2	1	Type	III	restriction	enzyme,	res	subunit
KaiC	PF06745.8	gi|15920767|ref|NP_376436.1|	-	0.0005	19.2	1.9	1.1	8.3	0.0	3.6	3	1	0	4	4	3	1	KaiC
UPF0079	PF02367.12	gi|15920767|ref|NP_376436.1|	-	0.00064	19.3	0.1	0.12	11.9	0.0	2.6	2	0	0	2	2	2	1	Uncharacterised	P-loop	hydrolase	UPF0079
Sigma54_activ_2	PF14532.1	gi|15920767|ref|NP_376436.1|	-	0.00088	19.3	0.0	1.3	9.0	0.0	2.8	2	0	0	2	2	2	1	Sigma-54	interaction	domain
KTI12	PF08433.5	gi|15920767|ref|NP_376436.1|	-	0.0017	17.6	0.2	0.78	8.8	0.0	3.1	3	0	0	3	3	2	1	Chromatin	associated	protein	KTI12
Glutaredoxin	PF00462.19	gi|15920767|ref|NP_376436.1|	-	0.0017	18.2	0.0	0.0091	15.9	0.0	2.3	2	0	0	2	2	1	1	Glutaredoxin
Viral_helicase1	PF01443.13	gi|15920767|ref|NP_376436.1|	-	0.002	17.7	0.0	0.13	11.7	0.0	2.4	2	0	0	2	2	2	1	Viral	(Superfamily	1)	RNA	helicase
NB-ARC	PF00931.17	gi|15920767|ref|NP_376436.1|	-	0.0025	16.7	1.1	1.6	7.5	0.0	3.4	2	1	1	3	3	3	1	NB-ARC	domain
Guanylate_kin	PF00625.16	gi|15920767|ref|NP_376436.1|	-	0.0029	17.0	2.3	3.1	7.1	0.0	3.6	3	1	1	4	4	3	0	Guanylate	kinase
AFG1_ATPase	PF03969.11	gi|15920767|ref|NP_376436.1|	-	0.0031	16.3	0.2	1.3	7.7	0.0	2.7	3	0	0	3	3	3	1	AFG1-like	ATPase
SKI	PF01202.17	gi|15920767|ref|NP_376436.1|	-	0.0034	17.2	0.0	1.3	8.8	0.0	2.8	2	0	0	2	2	2	1	Shikimate	kinase
Parvo_NS1	PF01057.12	gi|15920767|ref|NP_376436.1|	-	0.0042	15.9	0.0	0.27	10.0	0.0	2.3	2	0	0	2	2	2	1	Parvovirus	non-structural	protein	NS1
PPV_E1_C	PF00519.12	gi|15920767|ref|NP_376436.1|	-	0.0057	15.3	0.4	1.5	7.3	0.0	2.1	2	0	0	2	2	2	1	Papillomavirus	helicase
AAA_29	PF13555.1	gi|15920767|ref|NP_376436.1|	-	0.0061	16.0	0.0	4.1	6.9	0.0	2.4	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
Cytidylate_kin2	PF13189.1	gi|15920767|ref|NP_376436.1|	-	0.016	15.1	0.0	1.8	8.4	0.0	2.8	2	0	0	2	2	2	0	Cytidylate	kinase-like	family
AAA_30	PF13604.1	gi|15920767|ref|NP_376436.1|	-	0.017	14.6	0.0	7	6.1	0.0	2.5	2	0	0	2	2	2	0	AAA	domain
DUF258	PF03193.11	gi|15920767|ref|NP_376436.1|	-	0.021	14.0	0.0	4.7	6.3	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF258
ATP-synt_ab	PF00006.20	gi|15920767|ref|NP_376436.1|	-	0.022	14.2	0.0	2.1	7.8	0.0	2.4	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
DAP3	PF10236.4	gi|15920767|ref|NP_376436.1|	-	0.024	13.6	0.0	5.5	5.8	0.0	2.5	2	0	0	2	2	2	0	Mitochondrial	ribosomal	death-associated	protein	3
PhoH	PF02562.11	gi|15920767|ref|NP_376436.1|	-	0.033	13.4	0.1	4.2	6.5	0.0	3.1	2	1	1	3	3	3	0	PhoH-like	protein
SMC_N	PF02463.14	gi|15920767|ref|NP_376436.1|	-	0.041	13.1	0.0	26	3.9	0.0	3.6	2	2	1	4	4	4	0	RecF/RecN/SMC	N	terminal	domain
IPT	PF01745.11	gi|15920767|ref|NP_376436.1|	-	0.072	12.2	0.0	1.1	8.3	0.0	2.8	3	0	0	3	3	3	0	Isopentenyl	transferase
AAA_23	PF13476.1	gi|15920767|ref|NP_376436.1|	-	2	8.6	14.4	9.2	6.5	2.4	4.6	3	1	1	4	4	4	0	AAA	domain
DAO	PF01266.19	gi|15920768|ref|NP_376437.1|	-	4.6e-15	55.3	0.1	1.6e-08	33.8	0.0	2.5	2	1	0	2	2	2	2	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|15920768|ref|NP_376437.1|	-	2.2e-11	43.5	0.1	5.6e-11	42.3	0.0	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.19	gi|15920768|ref|NP_376437.1|	-	2.1e-10	40.0	0.3	1.3e-06	27.5	0.7	3.0	3	0	0	3	3	3	2	FAD	binding	domain
Thi4	PF01946.12	gi|15920768|ref|NP_376437.1|	-	9.3e-10	37.9	0.6	1.1e-08	34.4	0.1	2.2	2	0	0	2	2	2	1	Thi4	family
Amino_oxidase	PF01593.19	gi|15920768|ref|NP_376437.1|	-	7.8e-08	31.8	0.4	0.00018	20.6	0.0	2.8	3	0	0	3	3	3	2	Flavin	containing	amine	oxidoreductase
FAD_oxidored	PF12831.2	gi|15920768|ref|NP_376437.1|	-	2.8e-07	29.9	0.1	7.3e-07	28.6	0.0	1.6	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.9	gi|15920768|ref|NP_376437.1|	-	3.6e-07	30.2	0.0	1.7e-06	28.0	0.0	2.1	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
GDI	PF00996.13	gi|15920768|ref|NP_376437.1|	-	7.8e-07	27.7	0.1	0.005	15.2	0.0	2.3	2	0	0	2	2	2	2	GDP	dissociation	inhibitor
HI0933_like	PF03486.9	gi|15920768|ref|NP_376437.1|	-	1.8e-06	26.6	1.2	9.8e-05	20.9	0.3	2.2	2	0	0	2	2	2	1	HI0933-like	protein
GIDA	PF01134.17	gi|15920768|ref|NP_376437.1|	-	9.1e-06	24.7	5.1	0.0002	20.3	0.4	2.6	3	0	0	3	3	3	2	Glucose	inhibited	division	protein	A
Pyr_redox_3	PF13738.1	gi|15920768|ref|NP_376437.1|	-	1.1e-05	25.5	0.0	0.0017	18.4	0.0	2.3	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|15920768|ref|NP_376437.1|	-	7e-05	23.1	6.0	0.00013	22.3	0.5	3.1	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|15920768|ref|NP_376437.1|	-	0.00013	21.1	0.2	0.00022	20.4	0.1	1.3	1	0	0	1	1	1	1	FAD	binding	domain
Trp_halogenase	PF04820.9	gi|15920768|ref|NP_376437.1|	-	0.0052	15.4	2.5	0.015	13.9	0.4	2.4	2	1	2	4	4	4	1	Tryptophan	halogenase
Lycopene_cycl	PF05834.7	gi|15920768|ref|NP_376437.1|	-	0.03	13.2	0.3	0.29	9.9	0.1	2.2	2	0	0	2	2	2	0	Lycopene	cyclase	protein
YjeF_N	PF03853.10	gi|15920768|ref|NP_376437.1|	-	0.039	13.5	0.3	0.66	9.5	0.1	2.6	3	0	0	3	3	3	0	YjeF-related	protein	N-terminus
NAD_binding_9	PF13454.1	gi|15920768|ref|NP_376437.1|	-	0.047	13.4	0.0	0.073	12.8	0.0	1.4	1	0	0	1	1	1	0	FAD-NAD(P)-binding
Phosphodiest	PF01663.17	gi|15920769|ref|NP_376438.1|	-	6.9e-17	61.8	0.0	1.1e-14	54.5	0.0	2.5	1	1	0	1	1	1	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
PglZ	PF08665.7	gi|15920769|ref|NP_376438.1|	-	2.2e-05	24.2	0.1	0.00084	19.0	0.0	2.3	2	0	0	2	2	2	1	PglZ	domain
Metalloenzyme	PF01676.13	gi|15920769|ref|NP_376438.1|	-	3.3e-05	23.3	0.5	0.00021	20.7	0.4	2.0	1	1	0	1	1	1	1	Metalloenzyme	superfamily
DUSP	PF06337.7	gi|15920769|ref|NP_376438.1|	-	0.05	14.0	0.2	0.16	12.3	0.0	1.9	2	0	0	2	2	2	0	DUSP	domain
Pribosyltran	PF00156.22	gi|15920770|ref|NP_376439.1|	-	7.7e-20	70.8	0.9	1e-19	70.4	0.7	1.1	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
PRTase_3	PF15610.1	gi|15920770|ref|NP_376439.1|	-	0.11	11.3	0.0	0.14	11.0	0.0	1.1	1	0	0	1	1	1	0	PRTase	ComF-like
MM_CoA_mutase	PF01642.17	gi|15920771|ref|NP_376440.1|	-	8.9e-195	647.6	0.0	1e-194	647.5	0.0	1.0	1	0	0	1	1	1	1	Methylmalonyl-CoA	mutase
Glyoxalase_4	PF13669.1	gi|15920772|ref|NP_376441.1|	-	1.5e-25	89.3	0.0	1.9e-25	88.9	0.0	1.2	1	0	0	1	1	1	1	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase	PF00903.20	gi|15920772|ref|NP_376441.1|	-	2.7e-14	53.2	0.0	3e-14	53.1	0.0	1.1	1	0	0	1	1	1	1	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase_2	PF12681.2	gi|15920772|ref|NP_376441.1|	-	1.7e-10	41.4	0.0	2.1e-10	41.1	0.0	1.2	1	0	0	1	1	1	1	Glyoxalase-like	domain
Glyoxalase_3	PF13468.1	gi|15920772|ref|NP_376441.1|	-	3.6e-10	40.0	0.0	4.7e-10	39.6	0.0	1.2	1	0	0	1	1	1	1	Glyoxalase-like	domain
CheD	PF03975.8	gi|15920772|ref|NP_376441.1|	-	0.0047	16.6	0.4	0.32	10.7	0.1	2.1	1	1	1	2	2	2	1	CheD	chemotactic	sensory	transduction
CppA_N	PF14506.1	gi|15920772|ref|NP_376441.1|	-	0.029	14.0	0.2	0.044	13.4	0.1	1.6	1	1	0	1	1	1	0	CppA	N-terminal
Glyoxalase_5	PF14696.1	gi|15920772|ref|NP_376441.1|	-	0.088	12.7	0.0	0.13	12.1	0.0	1.4	1	1	0	1	1	1	0	Hydroxyphenylpyruvate	dioxygenase,	HPPD,	N-terminal
Exotox-A_bind	PF09101.5	gi|15920772|ref|NP_376441.1|	-	0.1	11.7	0.0	0.11	11.5	0.0	1.1	1	0	0	1	1	1	0	Exotoxin	A	binding
Osmo_CC	PF08946.5	gi|15920772|ref|NP_376441.1|	-	0.11	12.5	5.1	0.25	11.3	0.3	2.7	2	0	0	2	2	2	0	Osmosensory	transporter	coiled	coil
HSP20	PF00011.16	gi|15920773|ref|NP_376442.1|	-	2.2e-13	49.9	3.7	3.7e-12	46.0	2.5	2.2	1	1	0	1	1	1	1	Hsp20/alpha	crystallin	family
CS	PF04969.11	gi|15920773|ref|NP_376442.1|	-	6.6e-07	29.7	1.6	1.1e-06	29.0	1.1	1.3	1	0	0	1	1	1	1	CS	domain
GvpH	PF05455.6	gi|15920773|ref|NP_376442.1|	-	0.0013	18.3	0.1	0.0015	18.2	0.1	1.1	1	0	0	1	1	1	1	GvpH
PIH1	PF08190.7	gi|15920773|ref|NP_376442.1|	-	0.0041	16.5	0.1	0.0052	16.2	0.1	1.2	1	0	0	1	1	1	1	pre-RNA	processing	PIH1/Nop17
zf-ZPR1	PF03367.8	gi|15920774|ref|NP_376443.1|	-	2.4e-28	98.3	0.8	9.1e-27	93.1	0.5	2.0	1	1	0	1	1	1	1	ZPR1	zinc-finger	domain
Lar_restr_allev	PF14354.1	gi|15920774|ref|NP_376443.1|	-	0.026	14.8	0.1	0.054	13.8	0.1	1.5	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
zf-TFIIB	PF13453.1	gi|15920774|ref|NP_376443.1|	-	0.082	12.1	0.3	0.18	11.0	0.2	1.6	1	0	0	1	1	1	0	Transcription	factor	zinc-finger
Ribosomal_L37ae	PF01780.14	gi|15920774|ref|NP_376443.1|	-	0.36	10.7	1.7	8.3	6.3	0.9	2.6	2	1	0	2	2	2	0	Ribosomal	L37ae	protein	family
Zn_Tnp_IS1595	PF12760.2	gi|15920774|ref|NP_376443.1|	-	1.7	8.4	4.7	0.32	10.8	0.4	1.9	2	1	0	2	2	2	0	Transposase	zinc-ribbon	domain
GTP_EFTU	PF00009.22	gi|15920775|ref|NP_376444.1|	-	8.2e-25	87.3	0.0	1.5e-24	86.4	0.0	1.3	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D3	PF03143.12	gi|15920775|ref|NP_376444.1|	-	9.1e-18	64.2	0.1	1.9e-17	63.2	0.0	1.6	1	0	0	1	1	1	1	Elongation	factor	Tu	C-terminal	domain
GTP_EFTU_D2	PF03144.20	gi|15920775|ref|NP_376444.1|	-	1.7e-05	24.8	1.2	4.6e-05	23.4	0.3	2.2	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.18	gi|15920775|ref|NP_376444.1|	-	3.5e-05	23.7	0.3	0.00012	22.0	0.1	2.1	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
PduV-EutP	PF10662.4	gi|15920775|ref|NP_376444.1|	-	0.00025	20.5	0.5	5.6	6.4	0.0	3.6	2	1	1	3	3	3	3	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_4	PF04326.9	gi|15920775|ref|NP_376444.1|	-	0.01	15.9	5.6	0.08	13.0	0.7	3.0	3	1	0	3	3	3	0	Divergent	AAA	domain
MTHFR	PF02219.12	gi|15920775|ref|NP_376444.1|	-	0.067	12.2	0.1	0.12	11.4	0.1	1.3	1	0	0	1	1	1	0	Methylenetetrahydrofolate	reductase
COXG	PF06240.8	gi|15920776|ref|NP_376445.1|	-	9.8e-08	31.7	0.1	1.3e-07	31.3	0.1	1.2	1	0	0	1	1	1	1	Carbon	monoxide	dehydrogenase	subunit	G	(CoxG)
COXG	PF06240.8	gi|15920777|ref|NP_376446.1|	-	2.1e-47	160.3	0.2	2.3e-47	160.1	0.2	1.0	1	0	0	1	1	1	1	Carbon	monoxide	dehydrogenase	subunit	G	(CoxG)
Polyketide_cyc2	PF10604.4	gi|15920777|ref|NP_376446.1|	-	0.0032	17.6	0.0	0.0036	17.4	0.0	1.1	1	0	0	1	1	1	1	Polyketide	cyclase	/	dehydrase	and	lipid	transport
NTP_transf_3	PF12804.2	gi|15920778|ref|NP_376447.1|	-	1.8e-32	112.6	0.0	2.2e-32	112.3	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.14	gi|15920778|ref|NP_376447.1|	-	0.00014	21.4	0.0	0.00026	20.5	0.0	1.4	1	1	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
CofC	PF01983.11	gi|15920778|ref|NP_376447.1|	-	0.00086	18.3	0.5	0.0013	17.7	0.3	1.3	1	1	0	1	1	1	1	Guanylyl	transferase	CofC	like
CTP_transf_3	PF02348.14	gi|15920778|ref|NP_376447.1|	-	0.0011	18.6	0.1	0.0021	17.7	0.0	1.5	1	1	0	1	1	1	1	Cytidylyltransferase
Fer2_2	PF01799.15	gi|15920779|ref|NP_376448.1|	-	2.2e-36	123.5	1.8	3.7e-36	122.8	0.0	1.9	2	0	0	2	2	2	1	[2Fe-2S]	binding	domain
Fer2	PF00111.22	gi|15920779|ref|NP_376448.1|	-	1.4e-07	31.1	0.7	1.4e-07	31.1	0.5	1.9	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer2_3	PF13085.1	gi|15920779|ref|NP_376448.1|	-	0.001	18.8	1.5	0.0021	17.8	1.0	1.7	1	1	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer2_4	PF13510.1	gi|15920779|ref|NP_376448.1|	-	0.09	12.5	3.0	1.3	8.9	1.4	2.6	2	1	0	2	2	2	0	2Fe-2S	iron-sulfur	cluster	binding	domain
FAD_binding_5	PF00941.16	gi|15920780|ref|NP_376449.1|	-	6.4e-48	162.4	0.0	8.9e-48	161.9	0.0	1.2	1	0	0	1	1	1	1	FAD	binding	domain	in	molybdopterin	dehydrogenase
CO_deh_flav_C	PF03450.12	gi|15920780|ref|NP_376449.1|	-	7.4e-28	96.5	0.3	1.2e-27	95.8	0.2	1.3	1	0	0	1	1	1	1	CO	dehydrogenase	flavoprotein	C-terminal	domain
ATP_bind_4	PF01902.12	gi|15920780|ref|NP_376449.1|	-	0.031	13.6	0.0	0.051	12.9	0.0	1.3	1	0	0	1	1	1	0	ATP-binding	region
TP_methylase	PF00590.15	gi|15920781|ref|NP_376450.1|	-	2.1e-43	148.4	0.1	2.5e-43	148.2	0.1	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
DUF1404	PF07185.6	gi|15920782|ref|NP_376451.1|	-	8.8e-06	25.3	8.0	8.8e-06	25.3	5.5	1.9	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF1404)
OppC_N	PF12911.2	gi|15920782|ref|NP_376451.1|	-	0.044	13.1	1.5	0.044	13.1	1.1	3.0	2	1	0	2	2	2	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
MttA_Hcf106	PF02416.11	gi|15920782|ref|NP_376451.1|	-	0.31	10.1	3.2	0.4	9.8	0.2	2.4	2	0	0	2	2	2	0	mttA/Hcf106	family
SIS	PF01380.17	gi|15920783|ref|NP_376452.1|	-	2.8e-16	59.3	0.2	7.9e-09	35.2	0.0	3.1	3	0	0	3	3	3	2	SIS	domain
SIS_2	PF13580.1	gi|15920783|ref|NP_376452.1|	-	0.0017	18.0	0.1	0.0036	17.0	0.1	1.5	1	0	0	1	1	1	1	SIS	domain
Glyco_transf_4	PF13439.1	gi|15920783|ref|NP_376452.1|	-	0.006	16.3	0.0	0.014	15.1	0.0	1.5	2	0	0	2	2	2	1	Glycosyltransferase	Family	4
Amidohydro_1	PF01979.15	gi|15920784|ref|NP_376453.1|	-	3.1e-06	27.0	0.0	0.033	13.8	0.0	2.1	2	0	0	2	2	2	2	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|15920784|ref|NP_376453.1|	-	5.4e-05	22.9	0.0	9.3e-05	22.1	0.0	1.4	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_4	PF13147.1	gi|15920784|ref|NP_376453.1|	-	0.015	15.3	0.0	1.4	8.9	0.0	2.2	2	0	0	2	2	2	0	Amidohydrolase
Met_10	PF02475.11	gi|15920785|ref|NP_376454.1|	-	6.9e-49	166.1	0.0	8.9e-49	165.7	0.0	1.1	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_26	PF13659.1	gi|15920785|ref|NP_376454.1|	-	0.072	13.1	0.0	1.9	8.5	0.0	2.6	2	1	0	2	2	2	0	Methyltransferase	domain
Gln-synt_C	PF00120.19	gi|15920786|ref|NP_376455.1|	-	2e-54	184.4	0.0	2.5e-54	184.1	0.0	1.1	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.14	gi|15920786|ref|NP_376455.1|	-	0.019	14.5	0.0	0.42	10.2	0.0	2.6	1	1	0	1	1	1	0	Glutamine	synthetase,	beta-Grasp	domain
ADH_N	PF08240.7	gi|15920787|ref|NP_376456.1|	-	2.7e-32	110.7	2.0	2.7e-32	110.7	1.4	1.7	2	0	0	2	2	2	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|15920787|ref|NP_376456.1|	-	9.6e-23	80.1	0.0	1.7e-22	79.3	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|15920787|ref|NP_376456.1|	-	2.8e-09	37.9	0.0	5.3e-09	37.0	0.0	1.5	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
AlaDh_PNT_C	PF01262.16	gi|15920787|ref|NP_376456.1|	-	3.4e-07	29.9	0.0	6.2e-07	29.1	0.0	1.5	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
TrkA_N	PF02254.13	gi|15920787|ref|NP_376456.1|	-	0.0001	22.2	0.0	0.00026	20.9	0.0	1.7	2	0	0	2	2	2	1	TrkA-N	domain
NAD_binding_7	PF13241.1	gi|15920787|ref|NP_376456.1|	-	0.0006	20.0	0.0	0.001	19.3	0.0	1.3	1	0	0	1	1	1	1	Putative	NAD(P)-binding
Shikimate_DH	PF01488.15	gi|15920787|ref|NP_376456.1|	-	0.0022	18.0	0.0	0.0036	17.3	0.0	1.3	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
Pyr_redox_3	PF13738.1	gi|15920787|ref|NP_376456.1|	-	0.0026	17.8	0.0	0.004	17.2	0.0	1.3	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|15920787|ref|NP_376456.1|	-	0.003	17.9	0.1	0.007	16.7	0.1	1.6	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
2-Hacid_dh_C	PF02826.14	gi|15920787|ref|NP_376456.1|	-	0.0036	16.4	0.0	0.0063	15.6	0.0	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
CPSase_L_chain	PF00289.17	gi|15920787|ref|NP_376456.1|	-	0.01	15.9	0.0	0.017	15.1	0.0	1.4	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
ApbA	PF02558.11	gi|15920787|ref|NP_376456.1|	-	0.053	12.9	0.0	0.08	12.3	0.0	1.3	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
NAD_binding_10	PF13460.1	gi|15920787|ref|NP_376456.1|	-	0.084	12.8	0.0	0.12	12.3	0.0	1.3	1	0	0	1	1	1	0	NADH(P)-binding
XdhC_C	PF13478.1	gi|15920787|ref|NP_376456.1|	-	0.12	12.7	0.0	0.17	12.1	0.0	1.3	1	0	0	1	1	1	0	XdhC	Rossmann	domain
RTC	PF01137.16	gi|15920788|ref|NP_376457.1|	-	2.2e-83	278.5	0.1	2.5e-83	278.3	0.1	1.0	1	0	0	1	1	1	1	RNA	3'-terminal	phosphate	cyclase
RTC_insert	PF05189.8	gi|15920788|ref|NP_376457.1|	-	2.5e-26	91.6	0.3	4.8e-26	90.7	0.2	1.5	1	0	0	1	1	1	1	RNA	3'-terminal	phosphate	cyclase	(RTC),	insert	domain
Ribosomal_L5	PF00281.14	gi|15920788|ref|NP_376457.1|	-	0.061	13.1	0.2	0.26	11.0	0.1	2.1	2	0	0	2	2	2	0	Ribosomal	protein	L5
IMS	PF00817.15	gi|15920791|ref|NP_376460.1|	-	2e-46	157.4	1.1	9.7e-46	155.2	0.2	2.0	2	0	0	2	2	2	1	impB/mucB/samB	family
IMS_HHH	PF11798.3	gi|15920791|ref|NP_376460.1|	-	2.2e-07	30.4	0.0	5.6e-07	29.2	0.0	1.7	1	0	0	1	1	1	1	IMS	family	HHH	motif
IMS_C	PF11799.3	gi|15920791|ref|NP_376460.1|	-	3.9e-07	30.0	0.2	2.3e-06	27.5	0.0	2.1	3	0	0	3	3	3	1	impB/mucB/samB	family	C-terminal	domain
DUF1805	PF08827.6	gi|15920791|ref|NP_376460.1|	-	0.026	14.3	0.1	0.083	12.6	0.0	1.8	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1805)
HHH_5	PF14520.1	gi|15920791|ref|NP_376460.1|	-	0.051	13.7	0.1	0.13	12.4	0.0	1.7	1	0	0	1	1	1	0	Helix-hairpin-helix	domain
DUF3858	PF12970.2	gi|15920791|ref|NP_376460.1|	-	0.88	9.3	4.4	0.31	10.8	0.5	2.0	2	0	0	2	2	2	0	Domain	of	Unknown	Function	with	PDB	structure	(DUF3858)
PfkB	PF00294.19	gi|15920792|ref|NP_376461.1|	-	1e-40	139.8	0.0	5.2e-21	75.0	0.0	2.1	2	0	0	2	2	2	2	pfkB	family	carbohydrate	kinase
CRS1_YhbY	PF01985.16	gi|15920792|ref|NP_376461.1|	-	0.091	12.7	0.1	0.3	11.1	0.0	1.9	2	0	0	2	2	2	0	CRS1	/	YhbY	(CRM)	domain
TIP49	PF06068.8	gi|15920793|ref|NP_376462.1|	-	6.8e-159	528.8	4.8	8.1e-159	528.6	3.3	1.0	1	0	0	1	1	1	1	TIP49	C-terminus
AAA	PF00004.24	gi|15920793|ref|NP_376462.1|	-	8.9e-12	45.3	1.7	1.2e-08	35.2	0.1	2.7	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.7	gi|15920793|ref|NP_376462.1|	-	4.1e-09	35.8	4.0	9.9e-08	31.3	0.1	3.3	2	1	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_16	PF13191.1	gi|15920793|ref|NP_376462.1|	-	1.8e-07	31.3	0.3	1.8e-05	24.7	0.2	2.4	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|15920793|ref|NP_376462.1|	-	5.6e-07	29.7	2.0	0.0086	16.2	0.0	2.8	3	0	0	3	3	3	2	AAA	domain
AAA_5	PF07728.9	gi|15920793|ref|NP_376462.1|	-	1.6e-05	24.6	0.2	0.00035	20.2	0.0	2.5	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
Mg_chelatase	PF01078.16	gi|15920793|ref|NP_376462.1|	-	8.8e-05	21.7	0.6	0.00052	19.2	0.1	2.1	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_17	PF13207.1	gi|15920793|ref|NP_376462.1|	-	9.2e-05	23.2	0.1	0.00043	21.0	0.0	2.2	2	1	0	2	2	1	1	AAA	domain
AAA_25	PF13481.1	gi|15920793|ref|NP_376462.1|	-	9.5e-05	21.8	0.3	0.00023	20.6	0.2	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|15920793|ref|NP_376462.1|	-	0.0002	21.0	0.1	0.00075	19.2	0.1	2.0	2	0	0	2	2	1	1	Part	of	AAA	domain
AAA_33	PF13671.1	gi|15920793|ref|NP_376462.1|	-	0.00022	21.0	0.0	0.0005	19.9	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.12	gi|15920793|ref|NP_376462.1|	-	0.00032	20.1	0.1	0.00059	19.2	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_18	PF13238.1	gi|15920793|ref|NP_376462.1|	-	0.00051	20.3	0.1	0.0029	17.8	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
AAA_2	PF07724.9	gi|15920793|ref|NP_376462.1|	-	0.0011	18.9	0.0	0.0037	17.1	0.0	1.9	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
Sigma54_activat	PF00158.21	gi|15920793|ref|NP_376462.1|	-	0.0016	17.9	0.3	0.011	15.1	0.1	2.2	2	0	0	2	2	2	1	Sigma-54	interaction	domain
DUF2075	PF09848.4	gi|15920793|ref|NP_376462.1|	-	0.0016	17.4	0.1	0.0025	16.8	0.1	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
PhoH	PF02562.11	gi|15920793|ref|NP_376462.1|	-	0.0077	15.4	0.4	0.016	14.4	0.3	1.5	1	0	0	1	1	1	1	PhoH-like	protein
AAA_28	PF13521.1	gi|15920793|ref|NP_376462.1|	-	0.0092	15.9	0.4	0.037	13.9	0.1	2.2	2	0	0	2	2	2	1	AAA	domain
Parvo_NS1	PF01057.12	gi|15920793|ref|NP_376462.1|	-	0.0098	14.7	0.0	0.016	14.0	0.0	1.3	1	0	0	1	1	1	1	Parvovirus	non-structural	protein	NS1
DnaB_C	PF03796.10	gi|15920793|ref|NP_376462.1|	-	0.011	14.6	0.0	0.023	13.5	0.0	1.5	1	0	0	1	1	1	0	DnaB-like	helicase	C	terminal	domain
DNA_pol3_delta2	PF13177.1	gi|15920793|ref|NP_376462.1|	-	0.014	15.0	0.0	0.086	12.5	0.0	2.2	1	1	0	1	1	1	0	DNA	polymerase	III,	delta	subunit
RNA_helicase	PF00910.17	gi|15920793|ref|NP_376462.1|	-	0.015	15.4	0.0	0.028	14.5	0.0	1.4	1	0	0	1	1	1	0	RNA	helicase
AAA_11	PF13086.1	gi|15920793|ref|NP_376462.1|	-	0.017	14.7	0.1	0.038	13.5	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
NACHT	PF05729.7	gi|15920793|ref|NP_376462.1|	-	0.018	14.6	0.0	0.035	13.7	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
KaiC	PF06745.8	gi|15920793|ref|NP_376462.1|	-	0.022	13.8	2.5	0.28	10.2	0.1	2.4	2	0	0	2	2	2	0	KaiC
Zeta_toxin	PF06414.7	gi|15920793|ref|NP_376462.1|	-	0.028	13.5	0.1	0.063	12.3	0.1	1.6	1	0	0	1	1	1	0	Zeta	toxin
ABC_tran	PF00005.22	gi|15920793|ref|NP_376462.1|	-	0.03	14.6	0.1	0.065	13.5	0.1	1.6	1	0	0	1	1	1	0	ABC	transporter
AAA_14	PF13173.1	gi|15920793|ref|NP_376462.1|	-	0.031	14.1	0.1	1.2	9.0	0.0	2.6	2	0	0	2	2	2	0	AAA	domain
AAA_30	PF13604.1	gi|15920793|ref|NP_376462.1|	-	0.044	13.3	0.6	1.3	8.5	0.1	2.4	2	0	0	2	2	2	0	AAA	domain
MMR_HSR1	PF01926.18	gi|15920793|ref|NP_376462.1|	-	0.05	13.5	0.1	0.19	11.6	0.0	1.9	1	1	0	2	2	2	0	50S	ribosome-binding	GTPase
DUF815	PF05673.8	gi|15920793|ref|NP_376462.1|	-	0.055	12.3	0.1	0.1	11.5	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
UN_NPL4	PF11543.3	gi|15920793|ref|NP_376462.1|	-	0.075	13.3	0.3	6.8	7.0	0.1	2.8	2	0	0	2	2	2	0	Nuclear	pore	localisation	protein	NPL4
ResIII	PF04851.10	gi|15920793|ref|NP_376462.1|	-	0.11	12.3	0.6	0.42	10.4	0.1	2.0	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
Sigma54_activ_2	PF14532.1	gi|15920793|ref|NP_376462.1|	-	0.11	12.5	0.0	1	9.4	0.0	2.2	2	0	0	2	2	2	0	Sigma-54	interaction	domain
NUDIX	PF00293.23	gi|15920794|ref|NP_376463.1|	-	3.9e-14	52.4	0.0	5.2e-14	52.0	0.0	1.1	1	0	0	1	1	1	1	NUDIX	domain
NUDIX_4	PF14815.1	gi|15920794|ref|NP_376463.1|	-	0.14	11.6	0.0	0.23	10.9	0.0	1.3	1	0	0	1	1	1	0	NUDIX	domain
GATase	PF00117.23	gi|15920795|ref|NP_376464.1|	-	6.5e-35	120.3	0.0	7.1e-35	120.1	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|15920795|ref|NP_376464.1|	-	1.6e-10	40.7	0.0	4.9e-10	39.2	0.0	1.9	1	1	0	1	1	1	1	Peptidase	C26
SNO	PF01174.14	gi|15920795|ref|NP_376464.1|	-	1.9e-06	27.6	0.3	0.034	13.7	0.0	2.1	2	0	0	2	2	2	2	SNO	glutamine	amidotransferase	family
GATase_3	PF07685.9	gi|15920795|ref|NP_376464.1|	-	0.00028	20.5	0.1	0.0016	18.0	0.1	2.0	1	1	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
HTS	PF04204.11	gi|15920795|ref|NP_376464.1|	-	0.004	15.9	0.0	0.0049	15.6	0.0	1.1	1	0	0	1	1	1	1	Homoserine	O-succinyltransferase
KaiC	PF06745.8	gi|15920796|ref|NP_376465.1|	-	4.6e-59	199.2	0.3	5.8e-59	198.9	0.2	1.0	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.1	gi|15920796|ref|NP_376465.1|	-	1.8e-12	47.1	0.0	2.4e-12	46.6	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
GvpD	PF07088.6	gi|15920796|ref|NP_376465.1|	-	1.6e-07	30.0	0.0	2.3e-07	29.5	0.0	1.3	1	0	0	1	1	1	1	GvpD	gas	vesicle	protein
AAA_19	PF13245.1	gi|15920796|ref|NP_376465.1|	-	1.6e-06	27.7	0.0	6.9e-05	22.5	0.0	2.3	2	0	0	2	2	2	1	Part	of	AAA	domain
RecA	PF00154.16	gi|15920796|ref|NP_376465.1|	-	2.5e-06	26.7	0.0	4.8e-06	25.8	0.0	1.4	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
AAA_14	PF13173.1	gi|15920796|ref|NP_376465.1|	-	6.5e-06	26.0	0.1	0.00021	21.1	0.1	2.3	1	1	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.12	gi|15920796|ref|NP_376465.1|	-	1.2e-05	24.8	0.0	0.00014	21.3	0.0	2.0	1	1	1	2	2	2	1	IstB-like	ATP	binding	protein
Rad51	PF08423.6	gi|15920796|ref|NP_376465.1|	-	2e-05	23.6	0.0	4.7e-05	22.4	0.0	1.6	1	1	0	1	1	1	1	Rad51
MEDS	PF14417.1	gi|15920796|ref|NP_376465.1|	-	3.5e-05	22.9	0.1	5.1e-05	22.4	0.1	1.3	1	0	0	1	1	1	1	MEDS:	MEthanogen/methylotroph,	DcmR	Sensory	domain
AAA_22	PF13401.1	gi|15920796|ref|NP_376465.1|	-	0.00013	22.1	0.0	0.00025	21.2	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
PAXNEB	PF05625.6	gi|15920796|ref|NP_376465.1|	-	0.00089	18.1	0.1	0.0021	16.9	0.0	1.6	1	1	1	2	2	2	1	PAXNEB	protein
DUF2075	PF09848.4	gi|15920796|ref|NP_376465.1|	-	0.0029	16.6	0.0	0.0041	16.1	0.0	1.4	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
RNA_helicase	PF00910.17	gi|15920796|ref|NP_376465.1|	-	0.0033	17.5	0.0	0.0078	16.3	0.0	1.6	1	0	0	1	1	1	1	RNA	helicase
ResIII	PF04851.10	gi|15920796|ref|NP_376465.1|	-	0.012	15.4	0.0	0.019	14.8	0.0	1.3	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
DnaB_C	PF03796.10	gi|15920796|ref|NP_376465.1|	-	0.013	14.3	0.0	0.027	13.3	0.0	1.5	1	1	0	1	1	1	0	DnaB-like	helicase	C	terminal	domain
AAA_18	PF13238.1	gi|15920796|ref|NP_376465.1|	-	0.015	15.5	0.4	0.061	13.6	0.3	2.1	1	1	0	1	1	1	0	AAA	domain
NACHT	PF05729.7	gi|15920796|ref|NP_376465.1|	-	0.023	14.3	0.0	0.062	12.9	0.0	1.9	1	1	0	1	1	1	0	NACHT	domain
AAA_17	PF13207.1	gi|15920796|ref|NP_376465.1|	-	0.029	15.1	0.6	0.075	13.8	0.4	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|15920796|ref|NP_376465.1|	-	0.033	13.6	0.0	0.081	12.3	0.0	1.3	1	1	0	1	1	1	0	AAA-like	domain
ATP-synt_ab	PF00006.20	gi|15920796|ref|NP_376465.1|	-	0.04	13.4	0.0	0.054	12.9	0.0	1.4	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
NTPase_1	PF03266.10	gi|15920796|ref|NP_376465.1|	-	0.063	12.9	0.2	0.14	11.8	0.1	1.7	1	1	0	1	1	1	0	NTPase
Zot	PF05707.7	gi|15920796|ref|NP_376465.1|	-	0.068	12.6	0.0	0.13	11.7	0.0	1.5	1	1	0	1	1	1	0	Zonular	occludens	toxin	(Zot)
AAA	PF00004.24	gi|15920796|ref|NP_376465.1|	-	0.075	13.2	0.2	0.33	11.1	0.1	2.1	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ArgK	PF03308.11	gi|15920796|ref|NP_376465.1|	-	0.082	11.6	0.1	3.6	6.2	0.0	2.3	2	0	0	2	2	2	0	ArgK	protein
AAA_28	PF13521.1	gi|15920796|ref|NP_376465.1|	-	0.11	12.4	0.0	0.2	11.5	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_31	PF13614.1	gi|15920796|ref|NP_376465.1|	-	0.11	12.3	0.0	0.18	11.7	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
DSPc	PF00782.15	gi|15920797|ref|NP_376466.1|	-	7.2e-11	41.7	0.0	9e-11	41.4	0.0	1.2	1	0	0	1	1	1	1	Dual	specificity	phosphatase,	catalytic	domain
Y_phosphatase	PF00102.22	gi|15920797|ref|NP_376466.1|	-	6.1e-09	35.5	0.0	8.3e-09	35.1	0.0	1.2	1	0	0	1	1	1	1	Protein-tyrosine	phosphatase
CDKN3	PF05706.7	gi|15920797|ref|NP_376466.1|	-	1.8e-05	24.2	0.0	2.3e-05	23.9	0.0	1.1	1	0	0	1	1	1	1	Cyclin-dependent	kinase	inhibitor	3	(CDKN3)
PTPlike_phytase	PF14566.1	gi|15920797|ref|NP_376466.1|	-	0.00032	20.7	0.0	0.00045	20.2	0.0	1.4	1	0	0	1	1	1	1	Inositol	hexakisphosphate
Y_phosphatase3	PF13350.1	gi|15920797|ref|NP_376466.1|	-	0.031	14.5	0.0	0.034	14.3	0.0	1.4	1	0	0	1	1	1	0	Tyrosine	phosphatase	family
Endonuclease_5	PF04493.9	gi|15920798|ref|NP_376467.1|	-	7.9e-43	146.2	0.4	9.6e-43	145.9	0.3	1.0	1	0	0	1	1	1	1	Endonuclease	V
NurA	PF09376.5	gi|15920798|ref|NP_376467.1|	-	0.048	13.1	0.3	0.9	8.9	0.0	2.2	1	1	1	2	2	2	0	NurA	domain
Isochorismatase	PF00857.15	gi|15920799|ref|NP_376468.1|	-	1.9e-43	148.3	0.0	2.2e-43	148.1	0.0	1.0	1	0	0	1	1	1	1	Isochorismatase	family
DHH	PF01368.15	gi|15920800|ref|NP_376469.1|	-	9.2e-09	35.0	0.1	1.6e-08	34.2	0.1	1.3	1	0	0	1	1	1	1	DHH	family
DHHA1	PF02272.14	gi|15920800|ref|NP_376469.1|	-	5.6e-07	29.1	0.1	1.4e-06	27.9	0.1	1.6	1	0	0	1	1	1	1	DHHA1	domain
AhpC-TSA	PF00578.16	gi|15920801|ref|NP_376470.1|	-	5.1e-30	103.7	0.0	6.7e-30	103.3	0.0	1.2	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|15920801|ref|NP_376470.1|	-	6.2e-12	45.2	0.0	8.1e-12	44.9	0.0	1.2	1	0	0	1	1	1	1	Redoxin
1-cysPrx_C	PF10417.4	gi|15920801|ref|NP_376470.1|	-	9.2e-11	41.2	0.3	1.9e-10	40.1	0.2	1.5	1	0	0	1	1	1	1	C-terminal	domain	of	1-Cys	peroxiredoxin
AhpC-TSA_2	PF13911.1	gi|15920801|ref|NP_376470.1|	-	0.0063	16.4	0.0	0.024	14.5	0.0	1.8	1	1	0	1	1	1	1	AhpC/TSA	antioxidant	enzyme
Metallophos_2	PF12850.2	gi|15920802|ref|NP_376471.1|	-	4e-09	36.4	0.1	6.7e-09	35.7	0.0	1.3	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|15920802|ref|NP_376471.1|	-	7.8e-07	28.6	0.1	1e-06	28.3	0.1	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
DUF763	PF05559.6	gi|15920803|ref|NP_376472.1|	-	9e-137	455.2	0.0	1.1e-136	455.0	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF763)
Citrate_synt	PF00285.16	gi|15920804|ref|NP_376473.1|	-	4.1e-135	450.1	0.0	4.6e-135	449.9	0.0	1.0	1	0	0	1	1	1	1	Citrate	synthase
PhoU_div	PF01865.11	gi|15920805|ref|NP_376474.1|	-	4.9e-13	48.7	8.0	5.8e-13	48.5	5.5	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF47
DASH_Dad1	PF08649.5	gi|15920805|ref|NP_376474.1|	-	0.29	10.8	1.9	0.61	9.8	0.0	2.4	3	0	0	3	3	3	0	DASH	complex	subunit	Dad1
PHO4	PF01384.15	gi|15920806|ref|NP_376475.1|	-	1.5e-35	122.4	34.2	5.1e-35	120.6	22.6	1.9	1	1	0	1	1	1	1	Phosphate	transporter	family
RHH_1	PF01402.16	gi|15920807|ref|NP_376476.1|	-	2.3e-08	33.5	0.1	3.5e-08	32.9	0.1	1.3	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
DEAD	PF00270.24	gi|15920808|ref|NP_376477.1|	-	3.7e-32	111.1	0.0	8.1e-29	100.2	0.0	2.4	2	0	0	2	2	2	2	DEAD/DEAH	box	helicase
ResIII	PF04851.10	gi|15920808|ref|NP_376477.1|	-	1.2e-09	38.2	0.0	4.8e-09	36.2	0.0	2.0	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.26	gi|15920808|ref|NP_376477.1|	-	4.2e-09	36.1	0.0	9.4e-09	35.0	0.0	1.6	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
HHH_5	PF14520.1	gi|15920808|ref|NP_376477.1|	-	0.0001	22.3	1.1	0.0011	19.1	0.0	3.3	4	0	0	4	4	4	1	Helix-hairpin-helix	domain
SNF2_N	PF00176.18	gi|15920808|ref|NP_376477.1|	-	0.00047	19.0	0.0	0.00094	18.0	0.0	1.4	1	0	0	1	1	1	1	SNF2	family	N-terminal	domain
HHH	PF00633.18	gi|15920808|ref|NP_376477.1|	-	0.0061	16.2	0.0	0.023	14.3	0.0	2.1	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
DNA_pol_lambd_f	PF10391.4	gi|15920808|ref|NP_376477.1|	-	0.11	12.1	0.0	0.53	9.8	0.0	2.3	2	0	0	2	2	2	0	Fingers	domain	of	DNA	polymerase	lambda
AAA_19	PF13245.1	gi|15920808|ref|NP_376477.1|	-	0.19	11.4	0.9	3.1	7.6	0.0	3.0	3	0	0	3	3	3	0	Part	of	AAA	domain
Carboxyl_trans	PF01039.17	gi|15920810|ref|NP_376479.1|	-	3e-196	652.5	1.7	3.5e-196	652.3	1.2	1.0	1	0	0	1	1	1	1	Carboxyl	transferase	domain
MdcE	PF06833.6	gi|15920810|ref|NP_376479.1|	-	0.00016	20.9	0.3	0.00038	19.7	0.0	1.7	2	0	0	2	2	2	1	Malonate	decarboxylase	gamma	subunit	(MdcE)
Biotin_lipoyl_2	PF13533.1	gi|15920811|ref|NP_376480.1|	-	2.5e-21	75.0	7.5	9.3e-10	38.0	0.1	3.2	2	1	1	3	3	3	3	Biotin-lipoyl	like
Biotin_lipoyl	PF00364.17	gi|15920811|ref|NP_376480.1|	-	3.1e-20	71.5	6.0	3.6e-19	68.1	2.2	2.4	2	0	0	2	2	2	1	Biotin-requiring	enzyme
HlyD	PF00529.15	gi|15920811|ref|NP_376480.1|	-	2.4e-12	46.7	3.5	1.7e-05	24.3	0.0	2.5	2	1	1	3	3	3	2	HlyD	family	secretion	protein
HlyD_3	PF13437.1	gi|15920811|ref|NP_376480.1|	-	3.2e-09	37.0	2.8	0.00077	19.7	0.0	3.3	3	1	0	3	3	3	2	HlyD	family	secretion	protein
HlyD_2	PF12700.2	gi|15920811|ref|NP_376480.1|	-	7.6e-09	35.1	3.2	7e-05	22.1	0.1	2.8	1	1	2	3	3	3	2	HlyD	family	secretion	protein
NQRA	PF05896.6	gi|15920811|ref|NP_376480.1|	-	0.00015	21.0	0.6	0.00038	19.7	0.4	1.7	1	1	1	2	2	2	1	Na(+)-translocating	NADH-quinone	reductase	subunit	A	(NQRA)
RnfC_N	PF13375.1	gi|15920811|ref|NP_376480.1|	-	0.00015	21.4	1.8	0.00044	19.9	1.3	1.8	1	1	0	1	1	1	1	RnfC	Barrel	sandwich	hybrid	domain
GCV_H	PF01597.14	gi|15920811|ref|NP_376480.1|	-	0.00026	20.6	1.0	0.00096	18.8	0.2	2.2	2	1	1	3	3	3	1	Glycine	cleavage	H-protein
PYNP_C	PF07831.8	gi|15920811|ref|NP_376480.1|	-	0.00042	19.7	0.5	0.21	11.0	0.0	2.4	1	1	1	2	2	2	2	Pyrimidine	nucleoside	phosphorylase	C-terminal	domain
PTS_EIIA_1	PF00358.15	gi|15920811|ref|NP_376480.1|	-	0.0022	17.5	1.1	0.43	10.1	0.0	3.7	1	1	3	4	4	4	1	phosphoenolpyruvate-dependent	sugar	phosphotransferase	system,	EIIA	1
DUF2118	PF09891.4	gi|15920811|ref|NP_376480.1|	-	0.0086	15.7	0.9	0.026	14.2	0.6	1.9	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2118)
QRPTase_N	PF02749.11	gi|15920811|ref|NP_376480.1|	-	0.026	14.3	0.0	1.3	8.8	0.0	2.8	2	1	1	3	3	3	0	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
Peptidase_M23	PF01551.17	gi|15920811|ref|NP_376480.1|	-	0.03	14.3	0.9	0.78	9.8	0.5	2.9	1	1	0	1	1	1	0	Peptidase	family	M23
Pox_vIL-18BP	PF05566.7	gi|15920811|ref|NP_376480.1|	-	0.051	13.5	0.2	2.2	8.2	0.1	2.3	1	1	1	2	2	2	0	Orthopoxvirus	interleukin	18	binding	protein
CPSase_L_D2	PF02786.12	gi|15920812|ref|NP_376481.1|	-	1.9e-63	213.6	0.0	2.8e-63	212.9	0.0	1.3	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
CPSase_L_chain	PF00289.17	gi|15920812|ref|NP_376481.1|	-	1.6e-42	144.0	0.1	3.7e-42	142.9	0.1	1.7	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
Biotin_carb_C	PF02785.14	gi|15920812|ref|NP_376481.1|	-	3.6e-33	113.7	0.0	7.2e-33	112.7	0.0	1.5	1	0	0	1	1	1	1	Biotin	carboxylase	C-terminal	domain
ATP-grasp_4	PF13535.1	gi|15920812|ref|NP_376481.1|	-	2e-09	37.4	0.0	5.3e-09	36.0	0.0	1.7	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|15920812|ref|NP_376481.1|	-	2.1e-09	36.5	0.0	4.4e-09	35.5	0.0	1.5	1	1	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
RimK	PF08443.6	gi|15920812|ref|NP_376481.1|	-	4.6e-05	22.9	0.0	0.00013	21.5	0.0	1.8	1	1	0	1	1	1	1	RimK-like	ATP-grasp	domain
ATP-grasp	PF02222.17	gi|15920812|ref|NP_376481.1|	-	8.6e-05	21.9	0.1	0.0003	20.1	0.0	1.9	2	0	0	2	2	2	1	ATP-grasp	domain
Dala_Dala_lig_C	PF07478.8	gi|15920812|ref|NP_376481.1|	-	9e-05	21.9	0.0	0.00024	20.5	0.0	1.7	2	0	0	2	2	2	1	D-ala	D-ala	ligase	C-terminus
ATP-grasp_3	PF02655.9	gi|15920812|ref|NP_376481.1|	-	0.016	15.0	0.0	0.029	14.2	0.0	1.4	1	0	0	1	1	1	0	ATP-grasp	domain
ATP-grasp_5	PF13549.1	gi|15920812|ref|NP_376481.1|	-	0.068	12.3	0.0	0.42	9.7	0.0	2.1	2	0	0	2	2	2	0	ATP-grasp	domain
Oxidored_nitro	PF00148.14	gi|15920812|ref|NP_376481.1|	-	0.12	10.9	0.1	0.22	10.1	0.1	1.4	1	0	0	1	1	1	0	Nitrogenase	component	1	type	Oxidoreductase
BPD_transp_1	PF00528.17	gi|15920813|ref|NP_376482.1|	-	3.4e-22	78.8	33.5	2.3e-14	53.3	8.0	3.6	3	1	1	4	4	4	2	Binding-protein-dependent	transport	system	inner	membrane	component
ABC_tran	PF00005.22	gi|15920814|ref|NP_376483.1|	-	1.2e-28	100.0	0.0	1.7e-28	99.5	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|15920814|ref|NP_376483.1|	-	4e-11	43.4	0.3	4.3e-05	23.6	0.0	2.1	1	1	0	2	2	2	2	AAA	domain
DUF258	PF03193.11	gi|15920814|ref|NP_376483.1|	-	0.00013	21.1	0.0	0.00025	20.2	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
SMC_N	PF02463.14	gi|15920814|ref|NP_376483.1|	-	0.00042	19.6	0.1	0.29	10.3	0.0	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_16	PF13191.1	gi|15920814|ref|NP_376483.1|	-	0.00078	19.4	0.4	0.0026	17.7	0.2	1.9	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_15	PF13175.1	gi|15920814|ref|NP_376483.1|	-	0.00092	18.3	0.9	0.095	11.7	0.1	2.2	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA_22	PF13401.1	gi|15920814|ref|NP_376483.1|	-	0.003	17.7	0.1	0.012	15.7	0.1	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|15920814|ref|NP_376483.1|	-	0.0032	18.2	2.3	0.0067	17.2	0.5	2.2	2	2	0	2	2	2	1	AAA	domain
AAA_23	PF13476.1	gi|15920814|ref|NP_376483.1|	-	0.005	17.1	0.1	0.011	16.0	0.1	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|15920814|ref|NP_376483.1|	-	0.013	14.9	0.1	0.18	11.1	0.0	2.3	2	1	0	2	2	2	0	AAA-like	domain
AAA	PF00004.24	gi|15920814|ref|NP_376483.1|	-	0.013	15.6	0.1	0.11	12.6	0.1	2.1	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_29	PF13555.1	gi|15920814|ref|NP_376483.1|	-	0.014	14.8	0.0	0.028	13.9	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_18	PF13238.1	gi|15920814|ref|NP_376483.1|	-	0.016	15.5	0.1	0.03	14.6	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
MobB	PF03205.9	gi|15920814|ref|NP_376483.1|	-	0.016	14.8	0.0	0.029	14.0	0.0	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NACHT	PF05729.7	gi|15920814|ref|NP_376483.1|	-	0.055	13.1	0.1	0.11	12.0	0.1	1.5	1	0	0	1	1	1	0	NACHT	domain
AAA_25	PF13481.1	gi|15920814|ref|NP_376483.1|	-	0.11	11.9	0.0	0.22	10.8	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
MMR_HSR1	PF01926.18	gi|15920814|ref|NP_376483.1|	-	0.12	12.3	0.3	0.14	12.1	0.2	1.5	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_33	PF13671.1	gi|15920814|ref|NP_376483.1|	-	0.12	12.2	0.0	0.25	11.2	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
ABC_ATPase	PF09818.4	gi|15920814|ref|NP_376483.1|	-	0.18	10.3	0.3	11	4.4	0.2	2.2	2	0	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
DUF1602	PF07673.9	gi|15920815|ref|NP_376484.1|	-	0.0038	16.6	0.4	0.0038	16.6	0.3	1.9	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1602)
MttA_Hcf106	PF02416.11	gi|15920816|ref|NP_376485.1|	-	4.4e-11	41.7	7.5	1.4e-10	40.0	5.2	1.9	1	1	0	1	1	1	1	mttA/Hcf106	family
DUF4446	PF14584.1	gi|15920816|ref|NP_376485.1|	-	0.0034	17.2	1.3	0.0049	16.7	0.9	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4446)
Syntaxin-6_N	PF09177.6	gi|15920816|ref|NP_376485.1|	-	0.0066	16.8	2.2	0.0082	16.5	1.5	1.2	1	0	0	1	1	1	1	Syntaxin	6,	N-terminal
Cortex-I_coil	PF09304.5	gi|15920816|ref|NP_376485.1|	-	0.0072	16.3	7.8	0.0083	16.1	5.4	1.1	1	0	0	1	1	1	1	Cortexillin	I,	coiled	coil
Uds1	PF15456.1	gi|15920816|ref|NP_376485.1|	-	0.0077	16.2	4.5	0.009	15.9	3.1	1.2	1	0	0	1	1	1	1	Up-regulated	During	Septation
Glyco_hydro_26	PF02156.10	gi|15920816|ref|NP_376485.1|	-	0.042	13.3	0.4	0.05	13.0	0.3	1.2	1	0	0	1	1	1	0	Glycosyl	hydrolase	family	26
DUF3573	PF12097.3	gi|15920816|ref|NP_376485.1|	-	0.045	12.3	3.1	0.044	12.3	2.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3573)
Ax_dynein_light	PF10211.4	gi|15920816|ref|NP_376485.1|	-	0.048	13.4	8.6	0.055	13.3	6.0	1.0	1	0	0	1	1	1	0	Axonemal	dynein	light	chain
Med10	PF09748.4	gi|15920816|ref|NP_376485.1|	-	0.067	13.0	3.9	0.087	12.6	2.7	1.3	1	0	0	1	1	1	0	Transcription	factor	subunit	Med10	of	Mediator	complex
Tetraspannin	PF00335.15	gi|15920816|ref|NP_376485.1|	-	0.076	12.2	0.2	0.1	11.8	0.1	1.2	1	0	0	1	1	1	0	Tetraspanin	family
DUF2149	PF09919.4	gi|15920816|ref|NP_376485.1|	-	0.095	12.8	2.6	0.067	13.2	0.4	1.6	1	1	1	2	2	2	0	Uncharacterized	conserved	protein	(DUF2149)
AcylCoA_dehyd_C	PF12186.3	gi|15920816|ref|NP_376485.1|	-	0.2	11.5	3.0	4.1	7.2	0.0	2.1	1	1	1	2	2	2	0	Acyl-CoA	dehydrogenase	C	terminal
ACCA	PF03255.9	gi|15920816|ref|NP_376485.1|	-	0.4	10.2	6.1	0.56	9.7	4.2	1.2	1	0	0	1	1	1	0	Acetyl	co-enzyme	A	carboxylase	carboxyltransferase	alpha	subunit
AAA_23	PF13476.1	gi|15920816|ref|NP_376485.1|	-	0.77	10.0	9.2	0.81	9.9	6.4	1.1	1	0	0	1	1	1	0	AAA	domain
WD-3	PF09765.4	gi|15920816|ref|NP_376485.1|	-	0.79	8.9	5.4	0.87	8.8	3.7	1.1	1	0	0	1	1	1	0	WD-repeat	region
Fzo_mitofusin	PF04799.8	gi|15920816|ref|NP_376485.1|	-	1	8.6	9.2	1.5	8.1	6.4	1.3	1	0	0	1	1	1	0	fzo-like	conserved	region
DUF3373	PF11853.3	gi|15920816|ref|NP_376485.1|	-	1.2	7.6	10.3	1.3	7.4	7.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3373)
HR1	PF02185.11	gi|15920816|ref|NP_376485.1|	-	2.3	8.0	16.9	11	5.8	11.7	1.9	1	1	0	1	1	1	0	Hr1	repeat
Atg14	PF10186.4	gi|15920816|ref|NP_376485.1|	-	3.9	6.3	11.0	4.3	6.2	7.7	1.0	1	0	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
BAR_3_WASP_bdg	PF10456.4	gi|15920817|ref|NP_376486.1|	-	0.00065	19.0	0.4	0.00074	18.8	0.3	1.1	1	0	0	1	1	1	1	WASP-binding	domain	of	Sorting	nexin	protein
MerR-DNA-bind	PF09278.6	gi|15920817|ref|NP_376486.1|	-	0.00073	19.8	0.2	0.053	13.9	0.0	2.1	2	0	0	2	2	2	1	MerR,	DNA	binding
Sds3	PF08598.6	gi|15920817|ref|NP_376486.1|	-	0.00077	19.0	6.9	0.00095	18.7	4.8	1.1	1	0	0	1	1	1	1	Sds3-like
DUF1192	PF06698.6	gi|15920817|ref|NP_376486.1|	-	0.0017	18.0	2.2	0.027	14.2	0.1	2.2	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1192)
AAA_13	PF13166.1	gi|15920817|ref|NP_376486.1|	-	0.0021	16.6	7.7	0.0024	16.4	5.3	1.0	1	0	0	1	1	1	1	AAA	domain
FlxA	PF14282.1	gi|15920817|ref|NP_376486.1|	-	0.0042	17.0	4.7	0.044	13.7	3.2	2.2	1	1	0	1	1	1	1	FlxA-like	protein
Fib_alpha	PF08702.5	gi|15920817|ref|NP_376486.1|	-	0.0049	16.9	6.1	0.0061	16.6	4.2	1.1	1	0	0	1	1	1	1	Fibrinogen	alpha/beta	chain	family
DUF4455	PF14643.1	gi|15920817|ref|NP_376486.1|	-	0.006	15.2	3.8	0.0076	14.9	2.7	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4455)
BLOC1_2	PF10046.4	gi|15920817|ref|NP_376486.1|	-	0.0066	16.5	5.1	0.015	15.3	3.5	1.6	1	1	0	1	1	1	1	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Baculo_PEP_C	PF04513.7	gi|15920817|ref|NP_376486.1|	-	0.0081	15.9	0.4	0.04	13.7	0.2	1.9	1	1	0	1	1	1	1	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
THP2	PF09432.5	gi|15920817|ref|NP_376486.1|	-	0.0084	15.9	2.6	0.012	15.5	1.8	1.1	1	0	0	1	1	1	1	Tho	complex	subunit	THP2
SF-assemblin	PF06705.6	gi|15920817|ref|NP_376486.1|	-	0.0096	15.0	7.0	0.023	13.8	4.8	1.5	1	1	0	1	1	1	1	SF-assemblin/beta	giardin
Spectrin	PF00435.16	gi|15920817|ref|NP_376486.1|	-	0.015	15.5	2.0	0.069	13.4	0.3	2.0	1	1	1	2	2	2	0	Spectrin	repeat
DUF3829	PF12889.2	gi|15920817|ref|NP_376486.1|	-	0.015	14.4	3.6	0.033	13.3	0.4	2.1	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3829)
Cob_adeno_trans	PF01923.13	gi|15920817|ref|NP_376486.1|	-	0.016	14.9	1.7	0.054	13.2	1.2	1.7	1	1	0	1	1	1	0	Cobalamin	adenosyltransferase
DUF387	PF04079.11	gi|15920817|ref|NP_376486.1|	-	0.016	14.5	0.4	0.035	13.4	0.2	1.6	1	1	1	2	2	2	0	Putative	transcriptional	regulators	(Ypuh-like)
DUF948	PF06103.6	gi|15920817|ref|NP_376486.1|	-	0.017	14.9	1.6	1.1	9.1	0.0	2.2	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
ApoLp-III	PF07464.6	gi|15920817|ref|NP_376486.1|	-	0.018	15.0	1.3	0.02	14.8	0.9	1.1	1	0	0	1	1	1	0	Apolipophorin-III	precursor	(apoLp-III)
ATP-synt_D	PF01813.12	gi|15920817|ref|NP_376486.1|	-	0.019	14.5	4.8	0.32	10.5	3.3	2.1	1	1	0	1	1	1	0	ATP	synthase	subunit	D
DUF2443	PF10398.4	gi|15920817|ref|NP_376486.1|	-	0.019	14.7	0.9	0.06	13.1	0.1	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2443)
Tup_N	PF08581.5	gi|15920817|ref|NP_376486.1|	-	0.021	15.0	6.4	0.031	14.4	4.4	1.2	1	0	0	1	1	1	0	Tup	N-terminal
DUF3338	PF11819.3	gi|15920817|ref|NP_376486.1|	-	0.021	14.2	1.1	0.76	9.2	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3338)
Transposase_22	PF02994.9	gi|15920817|ref|NP_376486.1|	-	0.025	13.1	7.8	0.029	12.8	5.4	1.1	1	0	0	1	1	1	0	L1	transposable	element
DUF4600	PF15372.1	gi|15920817|ref|NP_376486.1|	-	0.026	14.7	8.0	0.035	14.3	5.0	1.6	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4600)
Vps53_N	PF04100.7	gi|15920817|ref|NP_376486.1|	-	0.027	13.2	3.8	0.035	12.8	2.7	1.1	1	0	0	1	1	1	0	Vps53-like,	N-terminal
DUF4559	PF15112.1	gi|15920817|ref|NP_376486.1|	-	0.03	13.4	3.8	0.035	13.2	2.6	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4559)
DUF1664	PF07889.7	gi|15920817|ref|NP_376486.1|	-	0.031	14.0	1.4	0.052	13.3	1.0	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
DUF4473	PF14747.1	gi|15920817|ref|NP_376486.1|	-	0.033	14.3	1.2	0.14	12.3	0.8	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4473)
ZYG-11_interact	PF05884.7	gi|15920817|ref|NP_376486.1|	-	0.05	12.6	0.2	0.058	12.4	0.2	1.2	1	0	0	1	1	1	0	Interactor	of	ZYG-11
Spc7	PF08317.6	gi|15920817|ref|NP_376486.1|	-	0.05	12.2	7.1	0.058	12.0	5.0	1.1	1	0	0	1	1	1	0	Spc7	kinetochore	protein
DNA_topoisoIV	PF00521.15	gi|15920817|ref|NP_376486.1|	-	0.056	12.2	2.2	0.071	11.9	1.6	1.2	1	0	0	1	1	1	0	DNA	gyrase/topoisomerase	IV,	subunit	A
CHDCT2	PF08074.6	gi|15920817|ref|NP_376486.1|	-	0.057	13.1	2.5	0.21	11.3	0.3	2.0	1	1	1	2	2	2	0	CHDCT2	(NUC038)	domain
Apolipoprotein	PF01442.13	gi|15920817|ref|NP_376486.1|	-	0.057	12.9	4.2	0.12	11.8	2.9	1.5	1	1	0	1	1	1	0	Apolipoprotein	A1/A4/E	domain
DUF4446	PF14584.1	gi|15920817|ref|NP_376486.1|	-	0.058	13.2	4.5	0.059	13.2	0.3	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4446)
DUF3166	PF11365.3	gi|15920817|ref|NP_376486.1|	-	0.061	13.7	2.1	0.11	12.9	1.3	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3166)
Cation_efflux	PF01545.16	gi|15920817|ref|NP_376486.1|	-	0.077	12.0	0.0	0.083	11.9	0.0	1.1	1	0	0	1	1	1	0	Cation	efflux	family
OmpH	PF03938.9	gi|15920817|ref|NP_376486.1|	-	0.08	12.8	4.6	0.21	11.4	3.2	1.6	1	1	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
bZIP_2	PF07716.10	gi|15920817|ref|NP_376486.1|	-	0.085	12.6	1.6	0.085	12.6	1.1	2.2	2	0	0	2	2	2	0	Basic	region	leucine	zipper
BMFP	PF04380.8	gi|15920817|ref|NP_376486.1|	-	0.097	12.8	3.7	1.8	8.7	2.6	2.2	1	1	0	1	1	1	0	Membrane	fusogenic	activity
Syntaxin_2	PF14523.1	gi|15920817|ref|NP_376486.1|	-	0.1	12.6	7.5	0.98	9.4	5.2	2.3	1	1	0	1	1	1	0	Syntaxin-like	protein
Muted	PF14942.1	gi|15920817|ref|NP_376486.1|	-	0.11	12.4	5.7	0.32	10.8	0.3	2.1	1	1	1	2	2	2	0	Organelle	biogenesis,	Muted-like	protein
DUF479	PF04336.7	gi|15920817|ref|NP_376486.1|	-	0.14	12.3	0.5	1.1	9.3	0.0	2.3	1	1	2	3	3	3	0	Protein	of	unknown	function,	DUF479
DUF2877	PF11392.3	gi|15920817|ref|NP_376486.1|	-	0.15	12.2	0.1	0.78	9.9	0.0	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2877)
Prefoldin	PF02996.12	gi|15920817|ref|NP_376486.1|	-	0.16	11.6	8.3	0.34	10.5	2.0	2.4	1	1	1	2	2	2	0	Prefoldin	subunit
VASP_tetra	PF08776.6	gi|15920817|ref|NP_376486.1|	-	0.16	11.2	0.2	0.16	11.2	0.1	2.6	2	1	0	2	2	1	0	VASP	tetramerisation	domain
Med21	PF11221.3	gi|15920817|ref|NP_376486.1|	-	0.18	11.7	5.0	2	8.4	0.1	2.2	2	0	0	2	2	2	0	Subunit	21	of	Mediator	complex
Occludin_ELL	PF07303.8	gi|15920817|ref|NP_376486.1|	-	0.19	12.4	5.2	0.78	10.5	3.6	2.0	1	1	0	1	1	1	0	Occludin	homology	domain
FliD_C	PF07195.7	gi|15920817|ref|NP_376486.1|	-	0.2	10.9	6.5	2.8	7.1	1.4	2.0	1	1	1	2	2	2	0	Flagellar	hook-associated	protein	2	C-terminus
TBPIP	PF07106.8	gi|15920817|ref|NP_376486.1|	-	0.2	11.1	8.3	0.63	9.5	0.7	2.0	1	1	0	1	1	1	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
DUF3086	PF11285.3	gi|15920817|ref|NP_376486.1|	-	0.2	10.4	2.8	0.31	9.8	2.0	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3086)
Fmp27_WPPW	PF10359.4	gi|15920817|ref|NP_376486.1|	-	0.21	9.9	9.1	0.072	11.4	1.2	2.0	1	1	1	2	2	2	0	RNA	pol	II	promoter	Fmp27	protein	domain
IncA	PF04156.9	gi|15920817|ref|NP_376486.1|	-	0.21	11.1	13.3	0.71	9.4	9.2	1.8	1	1	0	1	1	1	0	IncA	protein
Med28	PF11594.3	gi|15920817|ref|NP_376486.1|	-	0.21	11.8	6.9	0.25	11.5	0.1	2.3	1	1	0	2	2	2	0	Mediator	complex	subunit	28
YlqD	PF11068.3	gi|15920817|ref|NP_376486.1|	-	0.22	11.5	6.3	1.4	8.9	3.2	2.1	1	1	0	1	1	1	0	YlqD	protein
DUF3347	PF11827.3	gi|15920817|ref|NP_376486.1|	-	0.22	11.5	3.0	0.28	11.1	2.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3347)
DUF4441	PF14536.1	gi|15920817|ref|NP_376486.1|	-	0.22	11.5	4.1	0.38	10.7	2.8	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4441)
SlyX	PF04102.7	gi|15920817|ref|NP_376486.1|	-	0.25	11.7	2.5	0.75	10.2	0.7	2.0	2	0	0	2	2	2	0	SlyX
Mnd1	PF03962.10	gi|15920817|ref|NP_376486.1|	-	0.28	10.8	7.4	0.82	9.3	5.1	1.7	1	1	0	1	1	1	0	Mnd1	family
DUF3375	PF11855.3	gi|15920817|ref|NP_376486.1|	-	0.29	9.8	6.6	0.51	9.0	1.6	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3375)
ING	PF12998.2	gi|15920817|ref|NP_376486.1|	-	0.29	11.4	5.0	0.8	10.0	1.8	2.3	1	1	1	2	2	2	0	Inhibitor	of	growth	proteins	N-terminal	histone-binding
AKNA	PF12443.3	gi|15920817|ref|NP_376486.1|	-	0.3	11.1	2.6	1.3	9.0	0.3	2.2	1	1	1	2	2	2	0	AT-hook-containing	transcription	factor
Atg14	PF10186.4	gi|15920817|ref|NP_376486.1|	-	0.34	9.8	5.0	0.46	9.3	3.4	1.3	1	0	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
HSP70	PF00012.15	gi|15920817|ref|NP_376486.1|	-	0.34	8.7	4.5	0.4	8.5	3.1	1.0	1	0	0	1	1	1	0	Hsp70	protein
Prefoldin_3	PF13758.1	gi|15920817|ref|NP_376486.1|	-	0.38	10.5	5.8	1.2	8.9	4.1	1.7	1	1	0	1	1	1	0	Prefoldin	subunit
SPX	PF03105.14	gi|15920817|ref|NP_376486.1|	-	0.45	10.2	8.8	2.9	7.6	6.1	1.9	1	1	0	1	1	1	0	SPX	domain
DUF2203	PF09969.4	gi|15920817|ref|NP_376486.1|	-	0.49	10.6	3.7	0.79	9.9	0.3	1.9	1	1	1	2	2	2	0	Uncharacterized	conserved	protein	(DUF2203)
Hemagglutinin	PF00509.13	gi|15920817|ref|NP_376486.1|	-	0.54	8.3	3.1	0.38	8.8	1.0	1.4	1	1	0	1	1	1	0	Haemagglutinin
Phasin	PF05597.6	gi|15920817|ref|NP_376486.1|	-	0.62	9.8	4.8	1.2	8.9	3.4	1.4	1	1	0	1	1	1	0	Poly(hydroxyalcanoate)	granule	associated	protein	(phasin)
WD40_alt	PF14077.1	gi|15920817|ref|NP_376486.1|	-	0.63	9.7	4.8	0.49	10.0	0.5	2.4	2	0	0	2	2	2	0	Alternative	WD40	repeat	motif
Seryl_tRNA_N	PF02403.17	gi|15920817|ref|NP_376486.1|	-	0.68	9.9	8.2	6.1	6.9	5.7	2.1	1	1	0	1	1	1	0	Seryl-tRNA	synthetase	N-terminal	domain
FliT	PF05400.8	gi|15920817|ref|NP_376486.1|	-	0.71	10.3	4.9	14	6.1	3.4	2.1	1	1	1	2	2	2	0	Flagellar	protein	FliT
DUF3573	PF12097.3	gi|15920817|ref|NP_376486.1|	-	0.81	8.2	4.0	2.2	6.8	2.8	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3573)
Fzo_mitofusin	PF04799.8	gi|15920817|ref|NP_376486.1|	-	0.83	9.0	5.5	0.78	9.1	1.5	2.0	1	1	0	1	1	1	0	fzo-like	conserved	region
ATP-synt_B	PF00430.13	gi|15920817|ref|NP_376486.1|	-	0.85	9.4	7.4	1.6	8.5	1.6	2.3	1	1	1	2	2	2	0	ATP	synthase	B/B'	CF(0)
DUF724	PF05266.9	gi|15920817|ref|NP_376486.1|	-	0.88	9.1	7.9	0.49	9.9	0.6	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF724)
DUF4140	PF13600.1	gi|15920817|ref|NP_376486.1|	-	0.9	10.0	5.4	1.3	9.5	0.6	2.1	1	1	0	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
DUF4407	PF14362.1	gi|15920817|ref|NP_376486.1|	-	0.92	8.4	3.4	3.3	6.5	0.5	1.9	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
Med9	PF07544.8	gi|15920817|ref|NP_376486.1|	-	0.94	9.2	5.3	1.7	8.4	2.7	2.0	1	1	1	2	2	2	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
Phlebovirus_NSM	PF07246.6	gi|15920817|ref|NP_376486.1|	-	1.2	8.2	6.7	29	3.7	4.7	2.0	1	1	0	1	1	1	0	Phlebovirus	nonstructural	protein	NS-M
DUF972	PF06156.8	gi|15920817|ref|NP_376486.1|	-	1.2	9.4	7.8	9	6.6	0.8	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF972)
DivIC	PF04977.10	gi|15920817|ref|NP_376486.1|	-	1.3	8.6	8.4	2.5	7.6	2.2	2.6	2	2	0	2	2	2	0	Septum	formation	initiator
DivIVA	PF05103.8	gi|15920817|ref|NP_376486.1|	-	1.6	8.7	9.1	3.1	7.8	1.0	2.5	1	1	1	2	2	2	0	DivIVA	protein
Enkurin	PF13864.1	gi|15920817|ref|NP_376486.1|	-	1.8	8.8	8.4	15	5.8	5.7	2.1	1	1	1	2	2	2	0	Calmodulin-binding
GreA_GreB_N	PF03449.10	gi|15920817|ref|NP_376486.1|	-	1.9	8.6	6.5	6.5	6.8	4.5	1.9	1	1	0	1	1	1	0	Transcription	elongation	factor,	N-terminal
TMPIT	PF07851.8	gi|15920817|ref|NP_376486.1|	-	1.9	7.4	4.4	3.1	6.7	3.1	1.4	1	1	0	1	1	1	0	TMPIT-like	protein
TMF_DNA_bd	PF12329.3	gi|15920817|ref|NP_376486.1|	-	2.1	8.2	13.4	1.5	8.6	3.5	2.4	1	1	0	2	2	2	0	TATA	element	modulatory	factor	1	DNA	binding
Bap31	PF05529.7	gi|15920817|ref|NP_376486.1|	-	3.1	7.1	6.8	4.4	6.7	4.3	1.7	1	1	0	1	1	1	0	B-cell	receptor-associated	protein	31-like
bZIP_1	PF00170.16	gi|15920817|ref|NP_376486.1|	-	4	7.4	12.5	0.71	9.8	1.8	2.6	1	1	2	3	3	3	0	bZIP	transcription	factor
DUF2951	PF11166.3	gi|15920817|ref|NP_376486.1|	-	4.6	7.1	8.1	4.2	7.2	1.1	2.3	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2951)
MutS_IV	PF05190.13	gi|15920817|ref|NP_376486.1|	-	4.6	7.4	8.5	21	5.3	0.5	2.8	1	1	1	2	2	2	0	MutS	family	domain	IV
Kinetocho_Slk19	PF12709.2	gi|15920817|ref|NP_376486.1|	-	4.7	7.3	9.6	8.4	6.5	2.2	2.5	1	1	1	2	2	2	0	Central	kinetochore-associated
Prefoldin_2	PF01920.15	gi|15920817|ref|NP_376486.1|	-	6.2	6.6	11.3	1.3e+02	2.4	0.2	2.8	1	1	1	2	2	2	0	Prefoldin	subunit
MttA_Hcf106	PF02416.11	gi|15920817|ref|NP_376486.1|	-	6.7	5.9	7.9	1.7	7.8	1.9	2.6	2	1	0	2	2	2	0	mttA/Hcf106	family
TSC22	PF01166.13	gi|15920817|ref|NP_376486.1|	-	7.2	6.6	8.0	1.2	9.1	1.0	2.6	2	1	1	3	3	2	0	TSC-22/dip/bun	family
FlaC_arch	PF05377.6	gi|15920817|ref|NP_376486.1|	-	7.8	6.4	8.3	9.8	6.1	0.4	3.1	1	1	1	3	3	3	0	Flagella	accessory	protein	C	(FlaC)
HR1	PF02185.11	gi|15920817|ref|NP_376486.1|	-	9.2	6.0	11.3	2.2e+02	1.6	7.8	2.6	1	1	0	1	1	1	0	Hr1	repeat
TatC	PF00902.13	gi|15920818|ref|NP_376487.1|	-	7.4e-49	166.0	21.7	9.5e-49	165.7	15.0	1.2	1	0	0	1	1	1	1	Sec-independent	protein	translocase	protein	(TatC)
Aconitase	PF00330.15	gi|15920819|ref|NP_376488.1|	-	2.7e-65	220.6	1.7	5.1e-41	140.6	0.1	2.3	1	1	1	2	2	2	2	Aconitase	family	(aconitate	hydratase)
DUF521	PF04412.8	gi|15920819|ref|NP_376488.1|	-	0.032	12.7	0.0	0.055	12.0	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF521)
LAT	PF15234.1	gi|15920819|ref|NP_376488.1|	-	0.085	12.3	0.0	0.14	11.6	0.0	1.2	1	0	0	1	1	1	0	Linker	for	activation	of	T-cells
Aconitase_C	PF00694.14	gi|15920820|ref|NP_376489.1|	-	1.4e-21	76.9	0.0	2.9e-21	75.9	0.0	1.5	2	0	0	2	2	2	1	Aconitase	C-terminal	domain
Aconitase_2_N	PF06434.8	gi|15920820|ref|NP_376489.1|	-	0.013	14.9	1.2	0.51	9.7	0.8	2.1	1	1	0	1	1	1	0	Aconitate	hydratase	2	N-terminus
Sipho_tail	PF05709.6	gi|15920820|ref|NP_376489.1|	-	0.038	13.1	0.0	0.048	12.7	0.0	1.1	1	0	0	1	1	1	0	Phage	tail	protein
Ribosomal_L22e	PF01776.12	gi|15920820|ref|NP_376489.1|	-	0.04	13.9	0.0	8.1	6.5	0.0	2.2	2	0	0	2	2	2	0	Ribosomal	L22e	protein	family
PEP-utilizers	PF00391.18	gi|15920820|ref|NP_376489.1|	-	0.056	13.0	1.1	0.4	10.2	0.7	2.3	1	1	0	1	1	1	0	PEP-utilising	enzyme,	mobile	domain
Nitroreductase	PF00881.19	gi|15920821|ref|NP_376490.1|	-	1.1e-29	103.3	0.0	1.7e-29	102.7	0.0	1.2	1	0	0	1	1	1	1	Nitroreductase	family
Aminotran_5	PF00266.14	gi|15920822|ref|NP_376491.1|	-	1.9e-36	125.6	0.0	2.5e-36	125.2	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-V
NAD_binding_7	PF13241.1	gi|15920822|ref|NP_376491.1|	-	0.012	15.8	0.0	0.037	14.2	0.0	1.9	1	1	0	1	1	1	0	Putative	NAD(P)-binding
Nbl1_Borealin_N	PF10444.4	gi|15920823|ref|NP_376492.1|	-	0.0019	17.5	0.9	0.0035	16.6	0.2	1.8	2	0	0	2	2	2	1	Nbl1	/	Borealin	N	terminal
DUF3452	PF11934.3	gi|15920823|ref|NP_376492.1|	-	0.012	14.9	2.2	0.018	14.3	1.5	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3452)
Pox_polyA_pol_N	PF12630.2	gi|15920823|ref|NP_376492.1|	-	2.9	8.0	13.6	0.56	10.3	4.7	2.2	1	1	0	2	2	2	0	Poxvirus	poly(A)	polymerase	N-terminal	domain
EVE	PF01878.13	gi|15920824|ref|NP_376493.1|	-	2.1e-15	57.0	0.1	2.4e-15	56.8	0.1	1.0	1	0	0	1	1	1	1	EVE	domain
DUF1830	PF08865.6	gi|15920824|ref|NP_376493.1|	-	0.014	14.9	0.4	0.033	13.8	0.1	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1830)
DUF1614	PF07758.6	gi|15920825|ref|NP_376494.1|	-	8.9e-48	162.3	15.1	8.9e-48	162.3	10.5	1.4	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1614)
NTP_transf_3	PF12804.2	gi|15920826|ref|NP_376495.1|	-	2.1e-08	34.4	0.0	5.5e-08	33.0	0.0	1.6	1	1	0	1	1	1	1	MobA-like	NTP	transferase	domain
NTP_transferase	PF00483.18	gi|15920826|ref|NP_376495.1|	-	0.11	11.7	0.0	0.14	11.4	0.0	1.2	1	0	0	1	1	1	0	Nucleotidyl	transferase
AIRS_C	PF02769.17	gi|15920827|ref|NP_376496.1|	-	4.8e-12	46.1	0.1	7e-12	45.6	0.0	1.3	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|15920827|ref|NP_376496.1|	-	6e-10	39.2	0.1	1.3e-09	38.1	0.1	1.6	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
ABC_tran	PF00005.22	gi|15920828|ref|NP_376497.1|	-	1.3e-31	109.7	0.0	1.8e-31	109.2	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|15920828|ref|NP_376497.1|	-	3.8e-16	59.9	3.7	6.3e-11	42.7	0.0	3.0	2	1	1	3	3	3	2	AAA	domain
AAA_15	PF13175.1	gi|15920828|ref|NP_376497.1|	-	6.6e-07	28.7	1.3	0.0066	15.5	0.0	3.2	2	1	1	3	3	3	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|15920828|ref|NP_376497.1|	-	0.00032	21.1	4.6	0.0073	16.6	0.7	2.4	1	1	1	2	2	2	1	AAA	domain
AAA_29	PF13555.1	gi|15920828|ref|NP_376497.1|	-	0.00045	19.6	0.0	0.00087	18.7	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
SbcCD_C	PF13558.1	gi|15920828|ref|NP_376497.1|	-	0.0022	17.8	0.0	0.025	14.4	0.0	2.2	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_13	PF13166.1	gi|15920828|ref|NP_376497.1|	-	0.0028	16.2	0.3	0.82	8.0	0.1	2.9	2	1	1	3	3	3	1	AAA	domain
SRP54	PF00448.17	gi|15920828|ref|NP_376497.1|	-	0.0062	16.0	0.1	0.012	15.0	0.1	1.5	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SMC_N	PF02463.14	gi|15920828|ref|NP_376497.1|	-	0.0065	15.7	0.2	2	7.6	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
Rad17	PF03215.10	gi|15920828|ref|NP_376497.1|	-	0.016	13.9	0.0	0.02	13.6	0.0	1.2	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
Thymidylate_kin	PF02223.12	gi|15920828|ref|NP_376497.1|	-	0.022	14.1	0.1	0.22	10.8	0.0	2.3	2	1	1	3	3	3	0	Thymidylate	kinase
NTPase_1	PF03266.10	gi|15920828|ref|NP_376497.1|	-	0.024	14.3	0.1	0.052	13.2	0.0	1.6	1	0	0	1	1	1	0	NTPase
AAA_2	PF07724.9	gi|15920828|ref|NP_376497.1|	-	0.029	14.2	0.0	0.54	10.1	0.0	2.3	2	1	0	2	2	1	0	AAA	domain	(Cdc48	subfamily)
AAA_33	PF13671.1	gi|15920828|ref|NP_376497.1|	-	0.04	13.8	0.1	0.19	11.5	0.0	2.3	2	1	0	2	2	2	0	AAA	domain
MobB	PF03205.9	gi|15920828|ref|NP_376497.1|	-	0.043	13.5	0.6	0.24	11.0	0.2	2.3	1	1	1	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA	PF00004.24	gi|15920828|ref|NP_376497.1|	-	0.057	13.6	1.1	0.4	10.8	0.7	2.4	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_18	PF13238.1	gi|15920828|ref|NP_376497.1|	-	0.072	13.3	0.7	0.25	11.6	0.5	2.1	1	1	0	1	1	1	0	AAA	domain
AAA_16	PF13191.1	gi|15920828|ref|NP_376497.1|	-	0.075	13.0	0.0	0.12	12.4	0.0	1.3	1	1	0	1	1	1	0	AAA	ATPase	domain
Repressor_Mnt	PF11423.3	gi|15920828|ref|NP_376497.1|	-	0.088	12.1	0.2	2.1	7.7	0.0	2.7	2	0	0	2	2	2	0	Regulatory	protein	Mnt
RRM_6	PF14259.1	gi|15920828|ref|NP_376497.1|	-	0.095	12.6	0.0	0.35	10.8	0.0	2.0	2	0	0	2	2	1	0	RNA	recognition	motif	(a.k.a.	RRM,	RBD,	or	RNP	domain)
AAA_30	PF13604.1	gi|15920828|ref|NP_376497.1|	-	0.1	12.1	0.0	0.2	11.2	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
DUF258	PF03193.11	gi|15920828|ref|NP_376497.1|	-	0.11	11.7	0.0	0.42	9.7	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF258
AAA_22	PF13401.1	gi|15920828|ref|NP_376497.1|	-	0.11	12.5	0.2	0.85	9.7	0.2	2.1	1	1	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.12	gi|15920828|ref|NP_376497.1|	-	0.13	11.6	0.1	3.1	7.1	0.0	2.4	2	1	0	2	2	2	0	IstB-like	ATP	binding	protein
Peripla_BP_2	PF01497.13	gi|15920828|ref|NP_376497.1|	-	0.14	11.2	0.0	0.2	10.7	0.0	1.4	1	0	0	1	1	1	0	Periplasmic	binding	protein
ABC2_membrane	PF01061.19	gi|15920829|ref|NP_376498.1|	-	1.7e-10	40.4	23.4	1.7e-10	40.4	16.2	2.7	2	1	0	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.2	gi|15920829|ref|NP_376498.1|	-	4.8e-09	35.7	36.6	2.8e-08	33.2	25.3	1.9	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|15920829|ref|NP_376498.1|	-	0.13	11.4	34.7	0.26	10.4	24.1	1.5	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
ECH	PF00378.15	gi|15920830|ref|NP_376499.1|	-	1.1e-34	119.6	0.1	1.2e-34	119.4	0.1	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
LPAM_1	PF08139.7	gi|15920830|ref|NP_376499.1|	-	0.16	12.2	0.7	0.46	10.7	0.0	2.1	2	0	0	2	2	2	0	Prokaryotic	membrane	lipoprotein	lipid	attachment	site
COX1	PF00115.15	gi|15920831|ref|NP_376500.1|	-	5.3e-55	186.8	64.4	5.3e-55	186.8	44.6	1.9	1	1	1	2	2	2	2	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
DUF3740	PF12548.3	gi|15920832|ref|NP_376501.1|	-	0.053	13.7	0.6	0.082	13.1	0.2	1.4	2	0	0	2	2	2	0	Sulfatase	protein
Peripla_BP_2	PF01497.13	gi|15920832|ref|NP_376501.1|	-	0.064	12.3	0.0	0.064	12.3	0.0	1.2	1	0	0	1	1	1	0	Periplasmic	binding	protein
Rhodanese	PF00581.15	gi|15920833|ref|NP_376502.1|	-	9.1e-13	48.5	0.0	1.4e-12	47.9	0.0	1.3	1	0	0	1	1	1	1	Rhodanese-like	domain
Myc_N	PF01056.13	gi|15920834|ref|NP_376503.1|	-	0.085	12.0	0.9	0.13	11.4	0.1	1.6	1	1	1	2	2	2	0	Myc	amino-terminal	region
Pyr_redox_2	PF07992.9	gi|15920835|ref|NP_376504.1|	-	6.7e-09	35.9	0.0	1.4e-08	34.8	0.0	1.7	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|15920835|ref|NP_376504.1|	-	0.03	14.7	0.2	1	9.8	0.0	2.8	2	1	1	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
DrsE	PF02635.10	gi|15920836|ref|NP_376505.1|	-	3.7e-06	26.9	0.0	4.4e-06	26.7	0.0	1.1	1	0	0	1	1	1	1	DsrE/DsrF-like	family
DrsE_2	PF13686.1	gi|15920836|ref|NP_376505.1|	-	0.0002	21.1	0.2	0.031	14.0	0.1	2.0	1	1	0	1	1	1	1	DsrE/DsrF/DrsH-like	family
DUF1641	PF07849.6	gi|15920837|ref|NP_376506.1|	-	7.6e-14	51.0	0.2	2.3e-13	49.5	0.1	1.9	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1641)
DUF1765	PF08578.5	gi|15920837|ref|NP_376506.1|	-	1e-05	25.6	1.3	0.079	13.0	0.1	3.9	1	1	3	4	4	4	1	Protein	of	unknown	function	(DUF1765)
DUF2267	PF10025.4	gi|15920837|ref|NP_376506.1|	-	0.00016	21.7	0.2	0.12	12.3	0.0	3.6	1	1	2	4	4	4	1	Uncharacterized	conserved	protein	(DUF2267)
DUF2666	PF10869.3	gi|15920837|ref|NP_376506.1|	-	0.00021	21.3	10.1	0.39	10.7	0.1	4.1	1	1	2	4	4	4	2	Protein	of	unknown	function	(DUF2666)
NEP	PF10167.4	gi|15920837|ref|NP_376506.1|	-	0.00041	20.0	2.6	0.63	9.7	0.0	4.1	2	1	2	4	4	4	1	Uncharacterised	conserved	protein
Uteroglobin	PF01099.12	gi|15920837|ref|NP_376506.1|	-	0.0043	16.8	8.0	7	6.5	0.2	4.7	5	1	0	5	5	5	1	Uteroglobin	family
GUCT	PF08152.7	gi|15920837|ref|NP_376506.1|	-	0.0053	16.7	0.2	12	5.9	0.0	4.1	3	1	0	4	4	4	0	GUCT	(NUC152)	domain
GMAP	PF06540.6	gi|15920837|ref|NP_376506.1|	-	0.038	13.7	4.1	2.6	7.8	0.0	4.4	5	0	0	5	5	5	0	Galanin	message	associated	peptide	(GMAP)
DUF2428	PF10350.4	gi|15920837|ref|NP_376506.1|	-	0.058	12.4	0.1	1.3	8.0	0.0	2.3	2	1	0	2	2	2	0	Putative	death-receptor	fusion	protein	(DUF2428)
Patatin	PF01734.17	gi|15920837|ref|NP_376506.1|	-	0.058	13.3	0.3	1.4	8.7	0.2	3.0	1	1	0	1	1	1	0	Patatin-like	phospholipase
SRP_SPB	PF02978.14	gi|15920837|ref|NP_376506.1|	-	0.06	13.6	4.5	37	4.6	0.0	4.7	4	2	0	5	5	5	0	Signal	peptide	binding	domain
IcmL	PF11393.3	gi|15920837|ref|NP_376506.1|	-	0.065	13.1	0.9	3.4	7.6	0.1	3.1	2	1	1	3	3	3	0	Macrophage	killing	protein	with	similarity	to	conjugation	protein
DUF2780	PF11075.3	gi|15920837|ref|NP_376506.1|	-	0.19	11.7	3.4	1.2	9.1	0.3	2.8	1	1	0	3	3	3	0	Protein	of	unknown	function	VcgC/VcgE	(DUF2780)
DUF2363	PF10155.4	gi|15920837|ref|NP_376506.1|	-	0.25	11.2	2.8	21	5.0	0.1	3.2	3	1	0	4	4	4	0	Uncharacterized	conserved	protein	(DUF2363)
PRA-PH	PF01503.12	gi|15920837|ref|NP_376506.1|	-	1.2	9.5	6.0	70	3.7	0.0	4.0	4	0	0	4	4	4	0	Phosphoribosyl-ATP	pyrophosphohydrolase
CK2S	PF15011.1	gi|15920837|ref|NP_376506.1|	-	1.5	8.6	4.4	2.2	8.0	0.6	2.7	2	1	1	3	3	3	0	Casein	Kinase	2	substrate
LRR_9	PF14580.1	gi|15920837|ref|NP_376506.1|	-	2.6	7.5	7.0	0.44	10.0	0.3	2.8	3	1	1	4	4	4	0	Leucine-rich	repeat
NAD_binding_2	PF03446.10	gi|15920839|ref|NP_376508.1|	-	3.4e-33	114.7	0.2	5e-33	114.2	0.2	1.2	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_binding_11	PF14833.1	gi|15920839|ref|NP_376508.1|	-	1.5e-25	89.5	0.1	2.2e-25	89.0	0.0	1.2	1	0	0	1	1	1	1	NAD-binding	of	NADP-dependent	3-hydroxyisobutyrate	dehydrogenase
F420_oxidored	PF03807.12	gi|15920839|ref|NP_376508.1|	-	2.9e-07	30.8	0.0	1e-06	29.0	0.0	1.9	2	1	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
GFO_IDH_MocA	PF01408.17	gi|15920839|ref|NP_376508.1|	-	0.00036	21.0	0.0	0.0012	19.3	0.0	1.9	2	0	0	2	2	2	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
Shikimate_DH	PF01488.15	gi|15920839|ref|NP_376508.1|	-	0.00048	20.2	0.0	0.00097	19.2	0.0	1.6	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|15920839|ref|NP_376508.1|	-	0.0015	17.7	0.1	0.0027	16.8	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
ApbA	PF02558.11	gi|15920839|ref|NP_376508.1|	-	0.075	12.4	0.2	0.9	8.9	0.0	2.1	2	0	0	2	2	2	0	Ketopantoate	reductase	PanE/ApbA
DUF2203	PF09969.4	gi|15920840|ref|NP_376509.1|	-	9.6e-37	125.8	0.0	1.3e-36	125.4	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2203)
PhoH	PF02562.11	gi|15920841|ref|NP_376510.1|	-	0.12	11.5	0.0	0.13	11.4	0.0	1.1	1	0	0	1	1	1	0	PhoH-like	protein
TP6A_N	PF04406.9	gi|15920842|ref|NP_376511.1|	-	0.033	13.8	0.2	0.056	13.1	0.2	1.4	1	0	0	1	1	1	0	Type	IIB	DNA	topoisomerase
Peptidase_M1	PF01433.15	gi|15920843|ref|NP_376512.1|	-	1.4e-113	379.9	0.2	1.9e-113	379.4	0.1	1.2	1	0	0	1	1	1	1	Peptidase	family	M1
Peptidase_MA_2	PF13485.1	gi|15920843|ref|NP_376512.1|	-	1.1e-19	70.7	0.6	1.1e-19	70.7	0.4	2.2	2	0	0	2	2	2	1	Peptidase	MA	superfamily
ERAP1_C	PF11838.3	gi|15920843|ref|NP_376512.1|	-	1.6e-16	60.4	1.5	3.6e-16	59.3	1.0	1.5	1	1	0	1	1	1	1	ERAP1-like	C-terminal	domain
Piwi	PF02171.12	gi|15920844|ref|NP_376513.1|	-	0.047	12.6	0.2	0.11	11.4	0.1	1.6	1	0	0	1	1	1	0	Piwi	domain
PLDc_2	PF13091.1	gi|15920844|ref|NP_376513.1|	-	0.083	12.6	0.9	0.3	10.8	0.1	2.0	2	0	0	2	2	2	0	PLD-like	domain
DUF4191	PF13829.1	gi|15920844|ref|NP_376513.1|	-	0.089	11.9	0.4	0.13	11.3	0.3	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4191)
DUF940	PF06082.6	gi|15920844|ref|NP_376513.1|	-	0.093	11.2	0.0	0.12	10.9	0.0	1.1	1	0	0	1	1	1	0	Bacterial	putative	lipoprotein	(DUF940)
Fib_alpha	PF08702.5	gi|15920844|ref|NP_376513.1|	-	0.18	11.9	0.3	0.18	11.9	0.2	2.4	3	0	0	3	3	3	0	Fibrinogen	alpha/beta	chain	family
Ribosomal_S13	PF00416.17	gi|15920844|ref|NP_376513.1|	-	0.2	12.1	2.0	0.6	10.5	0.0	2.5	2	2	0	2	2	2	0	Ribosomal	protein	S13/S18
YebO	PF13974.1	gi|15920844|ref|NP_376513.1|	-	0.21	11.3	3.9	0.85	9.4	2.7	2.2	1	1	0	1	1	1	0	YebO-like	protein
TraD_N	PF12615.3	gi|15920844|ref|NP_376513.1|	-	0.3	11.4	2.2	1	9.7	0.3	2.2	2	0	0	2	2	2	0	F	sex	factor	protein	N	terminal
tRNA-synt_1	PF00133.17	gi|15920845|ref|NP_376514.1|	-	1.9e-60	204.5	0.0	3.9e-49	167.1	0.0	2.5	2	1	0	2	2	2	2	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1g	PF09334.6	gi|15920845|ref|NP_376514.1|	-	2e-30	105.7	0.9	1.3e-13	50.3	0.0	4.3	3	1	0	3	3	3	2	tRNA	synthetases	class	I	(M)
Anticodon_1	PF08264.8	gi|15920845|ref|NP_376514.1|	-	2.7e-22	79.1	3.9	8.1e-22	77.6	2.7	1.9	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1e	PF01406.14	gi|15920845|ref|NP_376514.1|	-	5.4e-14	52.0	0.1	2.7e-06	26.7	0.0	3.0	2	1	0	3	3	3	2	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1_2	PF13603.1	gi|15920845|ref|NP_376514.1|	-	1.9e-11	43.6	0.0	8.6e-11	41.4	0.0	2.1	2	0	0	2	2	2	1	Leucyl-tRNA	synthetase,	Domain	2
Radical_SAM	PF04055.16	gi|15920846|ref|NP_376515.1|	-	5.3e-12	46.2	0.0	1.1e-11	45.1	0.0	1.6	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|15920846|ref|NP_376515.1|	-	4.4e-10	39.8	0.4	1.6e-09	38.0	0.0	2.0	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|15920846|ref|NP_376515.1|	-	1.5e-08	34.7	0.0	5.1e-08	32.9	0.0	1.9	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Peptidase_M20	PF01546.23	gi|15920847|ref|NP_376516.1|	-	1.2e-29	103.1	0.0	1.5e-29	102.8	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|15920847|ref|NP_376516.1|	-	1.4e-14	53.7	0.0	2.6e-14	52.9	0.0	1.4	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
DUF496	PF04363.7	gi|15920848|ref|NP_376517.1|	-	0.14	11.9	2.0	0.19	11.5	1.4	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF496)
ATP_bind_3	PF01171.15	gi|15920850|ref|NP_376519.1|	-	2.2e-16	59.9	0.0	3.7e-16	59.1	0.0	1.3	1	0	0	1	1	1	1	PP-loop	family
PAPS_reduct	PF01507.14	gi|15920850|ref|NP_376519.1|	-	7.1e-05	22.7	0.0	0.00019	21.2	0.0	1.7	1	1	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
NAD_synthase	PF02540.12	gi|15920850|ref|NP_376519.1|	-	0.00037	19.4	0.0	0.00049	19.0	0.0	1.2	1	0	0	1	1	1	1	NAD	synthase
tRNA_Me_trans	PF03054.11	gi|15920850|ref|NP_376519.1|	-	0.00039	19.0	0.0	0.00071	18.2	0.0	1.4	1	1	0	1	1	1	1	tRNA	methyl	transferase
QueC	PF06508.8	gi|15920850|ref|NP_376519.1|	-	0.0032	16.7	0.1	0.047	12.9	0.0	2.3	2	0	0	2	2	2	1	Queuosine	biosynthesis	protein	QueC
RecR	PF02132.10	gi|15920850|ref|NP_376519.1|	-	0.0037	16.6	2.4	0.0037	16.6	1.7	3.3	3	0	0	3	3	3	1	RecR	protein
Usp	PF00582.21	gi|15920850|ref|NP_376519.1|	-	0.0042	17.2	0.0	0.029	14.5	0.0	2.1	1	1	0	1	1	1	1	Universal	stress	protein	family
ThiI	PF02568.9	gi|15920850|ref|NP_376519.1|	-	0.0085	15.5	0.1	0.014	14.8	0.1	1.3	1	0	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
Asn_synthase	PF00733.16	gi|15920850|ref|NP_376519.1|	-	0.018	14.5	0.0	0.034	13.6	0.0	1.5	1	1	0	1	1	1	0	Asparagine	synthase
DZR	PF12773.2	gi|15920850|ref|NP_376519.1|	-	0.16	11.8	5.8	0.35	10.7	0.5	3.0	3	0	0	3	3	3	0	Double	zinc	ribbon
Nop10p	PF04135.7	gi|15920850|ref|NP_376519.1|	-	0.68	9.7	3.6	1.2	8.9	0.1	2.9	3	0	0	3	3	3	0	Nucleolar	RNA-binding	protein,	Nop10p	family
zf-ribbon_3	PF13248.1	gi|15920850|ref|NP_376519.1|	-	2.8	7.2	7.1	1.4	8.2	0.3	3.0	3	0	0	3	3	3	0	zinc-ribbon	domain
Nudix_N_2	PF14803.1	gi|15920850|ref|NP_376519.1|	-	3.4	7.4	9.0	14	5.4	0.1	3.8	3	1	0	3	3	3	0	Nudix	N-terminal
DUF2039	PF10217.4	gi|15920850|ref|NP_376519.1|	-	6.5	6.8	9.5	0.79	9.7	0.1	3.0	3	1	0	3	3	3	0	Uncharacterized	conserved	protein	(DUF2039)
SIR2	PF02146.12	gi|15920853|ref|NP_376522.1|	-	3.4e-52	176.7	0.0	4.3e-52	176.4	0.0	1.1	1	0	0	1	1	1	1	Sir2	family
Prok-E2_E	PF14462.1	gi|15920854|ref|NP_376523.1|	-	0.057	13.0	0.0	0.094	12.3	0.0	1.3	1	0	0	1	1	1	0	Prokaryotic	E2	family	E
SSF	PF00474.12	gi|15920855|ref|NP_376524.1|	-	1.1e-12	47.3	29.6	2.4e-12	46.2	20.5	1.5	1	0	0	1	1	1	1	Sodium:solute	symporter	family
DUF2434	PF10361.4	gi|15920855|ref|NP_376524.1|	-	0.21	10.6	4.2	0.07	12.1	0.7	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2434)
HTH_34	PF13601.1	gi|15920856|ref|NP_376525.1|	-	5.2e-06	26.3	0.5	7.1e-06	25.9	0.3	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
Phage_rep_org_N	PF09681.5	gi|15920856|ref|NP_376525.1|	-	6.2e-05	22.5	1.1	9.5e-05	21.9	0.7	1.3	1	0	0	1	1	1	1	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
TrmB	PF01978.14	gi|15920856|ref|NP_376525.1|	-	0.00046	19.8	0.6	0.00081	19.0	0.4	1.5	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_20	PF12840.2	gi|15920856|ref|NP_376525.1|	-	0.0043	16.8	0.0	0.0066	16.2	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
WAPL	PF07814.8	gi|15920856|ref|NP_376525.1|	-	0.012	14.3	0.3	2.2	6.9	0.0	2.0	1	1	1	2	2	2	0	Wings	apart-like	protein	regulation	of	heterochromatin
HTH_12	PF08461.5	gi|15920856|ref|NP_376525.1|	-	0.013	15.2	0.4	0.038	13.7	0.3	1.9	1	1	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
DUF2250	PF10007.4	gi|15920856|ref|NP_376525.1|	-	0.014	15.2	1.5	0.034	14.0	0.3	1.9	1	1	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
YfdX	PF10938.3	gi|15920856|ref|NP_376525.1|	-	0.018	14.7	1.0	0.67	9.6	0.7	2.0	1	1	0	1	1	1	0	YfdX	protein
DUF1495	PF07381.6	gi|15920856|ref|NP_376525.1|	-	0.028	14.0	0.0	0.07	12.8	0.0	1.8	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain	(DUF1495)
DUF4423	PF14394.1	gi|15920856|ref|NP_376525.1|	-	0.028	13.9	0.6	0.044	13.3	0.4	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
Prefoldin_3	PF13758.1	gi|15920856|ref|NP_376525.1|	-	0.031	14.0	2.8	0.11	12.3	0.2	2.1	1	1	0	2	2	2	0	Prefoldin	subunit
DUF769	PF05590.6	gi|15920856|ref|NP_376525.1|	-	0.055	12.6	0.3	0.11	11.6	0.2	1.4	1	1	1	2	2	2	0	Xylella	fastidiosa	protein	of	unknown	function	(DUF769)
Penicillinase_R	PF03965.11	gi|15920856|ref|NP_376525.1|	-	0.063	13.3	0.3	0.098	12.7	0.2	1.5	1	1	0	1	1	1	0	Penicillinase	repressor
WXG100	PF06013.7	gi|15920856|ref|NP_376525.1|	-	0.07	13.1	0.3	7.8	6.5	0.0	2.1	2	0	0	2	2	2	0	Proteins	of	100	residues	with	WXG
TLE_N	PF03920.10	gi|15920856|ref|NP_376525.1|	-	0.081	12.7	0.7	0.13	12.0	0.5	1.3	1	1	0	1	1	1	0	Groucho/TLE	N-terminal	Q-rich	domain
MarR_2	PF12802.2	gi|15920856|ref|NP_376525.1|	-	0.15	11.7	0.0	0.34	10.6	0.0	1.6	1	1	0	1	1	1	0	MarR	family
Prefoldin	PF02996.12	gi|15920856|ref|NP_376525.1|	-	0.19	11.3	4.5	3	7.5	0.2	2.1	2	0	0	2	2	2	0	Prefoldin	subunit
ABC_tran_2	PF12848.2	gi|15920856|ref|NP_376525.1|	-	0.53	10.1	5.0	0.21	11.4	1.5	1.8	1	1	1	2	2	2	0	ABC	transporter
DUF1726	PF08351.6	gi|15920857|ref|NP_376526.1|	-	0.17	11.6	0.7	7.8	6.2	0.2	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1726)
Na_H_Exchanger	PF00999.16	gi|15920858|ref|NP_376527.1|	-	2.5e-50	171.1	54.8	3.1e-50	170.7	38.0	1.0	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
Molybdopterin	PF00384.17	gi|15920859|ref|NP_376528.1|	-	1.6e-10	40.3	0.0	2.5e-09	36.4	0.0	2.0	1	1	0	1	1	1	1	Molybdopterin	oxidoreductase
Molydop_binding	PF01568.16	gi|15920859|ref|NP_376528.1|	-	0.0025	17.6	0.0	0.065	13.0	0.0	3.0	3	1	0	3	3	3	1	Molydopterin	dinucleotide	binding	domain
7kD_DNA_binding	PF02294.13	gi|15920860|ref|NP_376529.1|	-	8.3e-42	140.7	3.5	9.4e-42	140.5	2.4	1.0	1	0	0	1	1	1	1	7kD	DNA-binding	domain
Ribosomal_S5	PF00333.15	gi|15920860|ref|NP_376529.1|	-	0.17	11.6	0.6	0.29	10.9	0.4	1.6	1	1	0	1	1	1	0	Ribosomal	protein	S5,	N-terminal	domain
Peptidase_M61	PF05299.7	gi|15920861|ref|NP_376530.1|	-	9e-33	112.8	0.1	1.5e-32	112.1	0.1	1.3	1	0	0	1	1	1	1	M61	glycyl	aminopeptidase
Peptidase_MA_2	PF13485.1	gi|15920861|ref|NP_376530.1|	-	3.5e-09	36.7	0.0	5.6e-09	36.1	0.0	1.4	1	0	0	1	1	1	1	Peptidase	MA	superfamily
PDZ_2	PF13180.1	gi|15920861|ref|NP_376530.1|	-	0.00026	20.8	1.1	0.0035	17.1	0.7	2.3	1	1	0	1	1	1	1	PDZ	domain
PDZ	PF00595.19	gi|15920861|ref|NP_376530.1|	-	0.00058	19.9	0.1	0.0013	18.8	0.1	1.5	1	0	0	1	1	1	1	PDZ	domain	(Also	known	as	DHR	or	GLGF)
PaREP1	PF05942.6	gi|15920862|ref|NP_376531.1|	-	2.9e-33	114.1	2.8	4.3e-33	113.5	2.0	1.3	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
DUF357	PF04010.8	gi|15920862|ref|NP_376531.1|	-	0.0014	18.2	1.7	0.0026	17.4	0.2	2.2	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF357)
HEPN	PF05168.9	gi|15920862|ref|NP_376531.1|	-	0.03	14.2	1.4	0.03	14.2	1.0	2.2	3	0	0	3	3	3	0	HEPN	domain
DUF3216	PF11505.3	gi|15920862|ref|NP_376531.1|	-	0.046	13.5	0.6	0.38	10.5	0.2	2.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3216)
NA37	PF04245.8	gi|15920862|ref|NP_376531.1|	-	0.13	11.6	2.1	0.2	10.9	1.4	1.3	1	0	0	1	1	1	0	37-kD	nucleoid-associated	bacterial	protein
ESCRT-II	PF05871.7	gi|15920862|ref|NP_376531.1|	-	0.13	12.2	0.4	0.15	11.9	0.3	1.2	1	0	0	1	1	1	0	ESCRT-II	complex	subunit
DUF4398	PF14346.1	gi|15920862|ref|NP_376531.1|	-	0.62	10.1	6.1	1.3	9.1	3.3	2.1	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4398)
MFS_1	PF07690.11	gi|15920865|ref|NP_376534.1|	-	1e-35	123.1	71.6	8.6e-31	106.9	28.2	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
SAP25	PF15476.1	gi|15920865|ref|NP_376534.1|	-	0.16	11.4	0.9	0.4	10.1	0.4	1.7	2	0	0	2	2	2	0	Histone	deacetylase	complex	subunit	SAP25
AIM24	PF01987.12	gi|15920866|ref|NP_376535.1|	-	4.1e-55	186.5	0.5	4.6e-55	186.4	0.3	1.0	1	0	0	1	1	1	1	Mitochondrial	biogenesis	AIM24
P5CR_dimer	PF14748.1	gi|15920867|ref|NP_376536.1|	-	4.1e-32	110.3	0.4	1.1e-31	109.0	0.1	1.8	2	0	0	2	2	2	1	Pyrroline-5-carboxylate	reductase	dimerisation
F420_oxidored	PF03807.12	gi|15920867|ref|NP_376536.1|	-	2e-19	69.7	0.5	2e-19	69.7	0.3	1.9	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_Gly3P_dh_N	PF01210.18	gi|15920867|ref|NP_376536.1|	-	7e-11	42.1	1.0	1.2e-09	38.0	0.7	2.3	1	1	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
2-Hacid_dh_C	PF02826.14	gi|15920867|ref|NP_376536.1|	-	2.1e-08	33.5	0.1	3.6e-08	32.7	0.1	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_2	PF03446.10	gi|15920867|ref|NP_376536.1|	-	6e-07	29.4	0.2	1.1e-06	28.6	0.2	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
PDH	PF02153.12	gi|15920867|ref|NP_376536.1|	-	3e-06	26.3	0.6	3.6e-05	22.7	0.1	2.5	1	1	3	4	4	4	1	Prephenate	dehydrogenase
DapB_N	PF01113.15	gi|15920867|ref|NP_376536.1|	-	2.3e-05	24.2	0.8	0.0019	18.0	0.2	2.4	1	1	1	2	2	2	1	Dihydrodipicolinate	reductase,	N-terminus
ApbA	PF02558.11	gi|15920867|ref|NP_376536.1|	-	2.6e-05	23.7	0.2	4.7e-05	22.8	0.1	1.5	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
IlvN	PF07991.7	gi|15920867|ref|NP_376536.1|	-	0.00014	21.3	0.1	0.00021	20.7	0.1	1.3	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
NAD_binding_10	PF13460.1	gi|15920867|ref|NP_376536.1|	-	0.00015	21.8	0.1	0.00031	20.7	0.1	1.5	1	1	0	1	1	1	1	NADH(P)-binding
Shikimate_DH	PF01488.15	gi|15920867|ref|NP_376536.1|	-	0.0014	18.6	0.3	0.003	17.6	0.2	1.6	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
TrkA_N	PF02254.13	gi|15920867|ref|NP_376536.1|	-	0.0016	18.4	0.2	0.0041	17.1	0.1	1.8	1	0	0	1	1	1	1	TrkA-N	domain
UDPG_MGDP_dh_N	PF03721.9	gi|15920867|ref|NP_376536.1|	-	0.0027	17.0	1.5	0.042	13.2	0.3	2.4	1	1	1	2	2	2	2	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Semialdhyde_dh	PF01118.19	gi|15920867|ref|NP_376536.1|	-	0.012	15.9	0.1	0.019	15.2	0.1	1.4	1	0	0	1	1	1	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
CoA_binding_2	PF13380.1	gi|15920867|ref|NP_376536.1|	-	0.013	15.7	0.0	0.032	14.4	0.0	1.5	1	1	0	1	1	1	0	CoA	binding	domain
ADH_zinc_N	PF00107.21	gi|15920867|ref|NP_376536.1|	-	0.045	13.3	0.1	0.084	12.4	0.0	1.6	1	0	0	1	1	1	0	Zinc-binding	dehydrogenase
GFO_IDH_MocA	PF01408.17	gi|15920867|ref|NP_376536.1|	-	0.084	13.3	0.0	0.17	12.3	0.0	1.5	1	0	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
CTP_transf_2	PF01467.21	gi|15920869|ref|NP_376538.1|	-	1.5e-13	51.0	0.0	2e-13	50.6	0.0	1.2	1	0	0	1	1	1	1	Cytidylyltransferase
Citrate_ly_lig	PF08218.6	gi|15920869|ref|NP_376538.1|	-	0.00053	19.4	0.0	0.46	9.9	0.0	2.2	2	0	0	2	2	2	2	Citrate	lyase	ligase	C-terminal	domain
HIGH_NTase1	PF05636.6	gi|15920869|ref|NP_376538.1|	-	0.027	13.5	0.0	1.8	7.5	0.0	2.2	2	0	0	2	2	2	0	HIGH	Nucleotidyl	Transferase
FAD_binding_4	PF01565.18	gi|15920870|ref|NP_376539.1|	-	2.8e-46	156.4	0.0	9.1e-46	154.7	0.0	1.8	2	0	0	2	2	2	1	FAD	binding	domain
FAD-oxidase_C	PF02913.14	gi|15920870|ref|NP_376539.1|	-	2.4e-41	141.7	0.0	3.6e-41	141.1	0.0	1.2	1	0	0	1	1	1	1	FAD	linked	oxidases,	C-terminal	domain
PaREP1	PF05942.6	gi|15920871|ref|NP_376540.1|	-	2.1e-12	46.9	0.2	6.5e-12	45.3	0.2	1.7	1	1	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
DUF445	PF04286.7	gi|15920871|ref|NP_376540.1|	-	0.018	14.5	0.4	0.021	14.3	0.3	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF445)
Aida_N	PF08910.5	gi|15920871|ref|NP_376540.1|	-	0.046	13.9	0.1	0.087	13.0	0.1	1.4	1	1	0	1	1	1	0	Aida	N-terminus
Colicin	PF01024.14	gi|15920871|ref|NP_376540.1|	-	0.052	13.1	0.1	0.069	12.7	0.1	1.3	1	0	0	1	1	1	0	Colicin	pore	forming	domain
HEPN	PF05168.9	gi|15920871|ref|NP_376540.1|	-	0.094	12.6	0.7	0.84	9.5	0.5	2.1	1	1	0	1	1	1	0	HEPN	domain
SapB_1	PF05184.10	gi|15920871|ref|NP_376540.1|	-	1.1	9.1	7.9	12	5.8	0.1	4.3	5	0	0	5	5	5	0	Saposin-like	type	B,	region	1
Pyr_redox_2	PF07992.9	gi|15920872|ref|NP_376541.1|	-	4.6e-14	52.7	0.2	7.8e-14	52.0	0.1	1.3	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|15920872|ref|NP_376541.1|	-	6.8e-08	32.8	1.2	0.0062	16.9	0.1	3.0	2	2	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|15920872|ref|NP_376541.1|	-	3.3e-05	22.9	0.1	0.058	12.2	0.0	3.0	3	0	0	3	3	3	2	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|15920872|ref|NP_376541.1|	-	0.0031	17.5	0.1	0.008	16.1	0.0	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Saccharop_dh	PF03435.13	gi|15920872|ref|NP_376541.1|	-	0.0036	16.3	0.0	0.012	14.5	0.0	1.8	3	0	0	3	3	3	1	Saccharopine	dehydrogenase
Pyr_redox_3	PF13738.1	gi|15920872|ref|NP_376541.1|	-	0.0086	16.1	0.0	2.1	8.3	0.0	2.8	2	1	1	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
ApbA	PF02558.11	gi|15920872|ref|NP_376541.1|	-	0.014	14.8	0.1	0.034	13.5	0.0	1.8	1	1	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
TrkA_N	PF02254.13	gi|15920872|ref|NP_376541.1|	-	0.035	14.0	0.3	0.17	11.8	0.0	2.3	3	1	0	3	3	3	0	TrkA-N	domain
FAD_binding_2	PF00890.19	gi|15920872|ref|NP_376541.1|	-	0.051	12.4	0.0	0.085	11.6	0.0	1.3	1	0	0	1	1	1	0	FAD	binding	domain
DUF2338	PF10100.4	gi|15920872|ref|NP_376541.1|	-	0.072	11.4	0.0	0.092	11.0	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2338)
DUF1049	PF06305.6	gi|15920873|ref|NP_376542.1|	-	0.5	9.8	2.4	0.96	8.9	1.7	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1049)
RNA_pol_Rpb2_4	PF04566.8	gi|15920875|ref|NP_376544.1|	-	0.23	11.3	1.1	14	5.5	0.0	2.8	3	0	0	3	3	3	0	RNA	polymerase	Rpb2,	domain	4
Lactamase_B	PF00753.22	gi|15920876|ref|NP_376545.1|	-	2.5e-08	33.8	0.7	4.6e-08	32.9	0.5	1.4	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|15920876|ref|NP_376545.1|	-	4.2e-05	23.1	0.0	8.6e-05	22.1	0.0	1.4	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
BAF	PF02961.9	gi|15920876|ref|NP_376545.1|	-	0.019	15.2	0.0	0.057	13.7	0.0	1.7	2	0	0	2	2	2	0	Barrier	to	autointegration	factor
Lactamase_B_3	PF13483.1	gi|15920876|ref|NP_376545.1|	-	0.066	12.9	0.0	0.099	12.3	0.0	1.3	1	0	0	1	1	1	0	Beta-lactamase	superfamily	domain
Asp_Glu_race	PF01177.17	gi|15920877|ref|NP_376546.1|	-	2.4e-15	57.0	0.0	2.7e-15	56.8	0.0	1.0	1	0	0	1	1	1	1	Asp/Glu/Hydantoin	racemase
DUF4468	PF14730.1	gi|15920878|ref|NP_376547.1|	-	0.069	12.8	0.1	0.24	11.1	0.1	2.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4468)	with	TBP-like	fold
HTH_45	PF14947.1	gi|15920879|ref|NP_376548.1|	-	1.1e-28	98.8	4.3	1.4e-28	98.5	3.0	1.1	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_24	PF13412.1	gi|15920879|ref|NP_376548.1|	-	9.1e-05	21.7	0.2	9.1e-05	21.7	0.2	1.8	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
DUF4364	PF14277.1	gi|15920879|ref|NP_376548.1|	-	0.0044	16.6	0.3	0.0048	16.5	0.2	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
DUF1940	PF09155.5	gi|15920879|ref|NP_376548.1|	-	0.016	15.0	0.6	0.023	14.5	0.2	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1940)
Topoisom_bac	PF01131.15	gi|15920879|ref|NP_376548.1|	-	0.016	14.0	0.2	0.022	13.6	0.1	1.2	1	0	0	1	1	1	0	DNA	topoisomerase
TNF	PF00229.13	gi|15920879|ref|NP_376548.1|	-	0.025	14.1	0.2	0.037	13.6	0.1	1.4	1	1	0	1	1	1	0	TNF(Tumour	Necrosis	Factor)	family
HemN_C	PF06969.11	gi|15920879|ref|NP_376548.1|	-	0.044	13.8	0.0	0.073	13.1	0.0	1.4	1	0	0	1	1	1	0	HemN	C-terminal	domain
DUF3116	PF11313.3	gi|15920879|ref|NP_376548.1|	-	0.051	13.1	0.4	1.5	8.4	0.0	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3116)
HTH_27	PF13463.1	gi|15920879|ref|NP_376548.1|	-	0.069	13.4	0.0	0.11	12.8	0.0	1.6	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
XdhC_C	PF13478.1	gi|15920880|ref|NP_376549.1|	-	2.9e-22	79.4	0.1	3.9e-22	79.0	0.1	1.1	1	0	0	1	1	1	1	XdhC	Rossmann	domain
UDPG_MGDP_dh_C	PF03720.10	gi|15920880|ref|NP_376549.1|	-	0.097	12.8	0.0	0.21	11.7	0.0	1.6	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
zinc_ribbon_2	PF13240.1	gi|15920881|ref|NP_376550.1|	-	2.5e-08	33.1	5.8	3.8e-08	32.5	4.0	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|15920881|ref|NP_376550.1|	-	5.5e-08	31.7	3.7	8e-08	31.2	2.6	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|15920881|ref|NP_376550.1|	-	1.1e-06	28.2	1.4	1.6e-06	27.8	1.0	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-RanBP	PF00641.13	gi|15920881|ref|NP_376550.1|	-	0.0032	16.5	1.8	0.0045	16.0	1.2	1.2	1	0	0	1	1	1	1	Zn-finger	in	Ran	binding	protein	and	others
DNA_RNApol_7kD	PF03604.8	gi|15920881|ref|NP_376550.1|	-	0.045	13.2	0.5	0.34	10.4	0.0	2.1	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
UPF0547	PF10571.4	gi|15920881|ref|NP_376550.1|	-	0.25	11.0	1.9	12	5.6	0.1	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
Nudix_N_2	PF14803.1	gi|15920881|ref|NP_376550.1|	-	2.3	7.9	5.1	4.1	7.1	0.1	2.3	2	0	0	2	2	2	0	Nudix	N-terminal
RNA_POL_M_15KD	PF02150.11	gi|15920881|ref|NP_376550.1|	-	2.3	7.9	7.7	1.1	8.9	0.4	2.4	1	1	1	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
Ammonium_transp	PF00909.16	gi|15920882|ref|NP_376551.1|	-	1.7e-91	306.6	26.1	2.1e-91	306.3	18.1	1.1	1	0	0	1	1	1	1	Ammonium	Transporter	Family
DUF3188	PF11384.3	gi|15920882|ref|NP_376551.1|	-	0.15	11.6	1.4	5.9	6.5	0.0	2.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3188)
RNF111_N	PF15303.1	gi|15920883|ref|NP_376552.1|	-	0.089	12.3	1.4	0.085	12.3	1.0	1.0	1	0	0	1	1	1	0	E3	ubiquitin-protein	ligase	Arkadia	N-terminus
Ifi-6-16	PF06140.8	gi|15920883|ref|NP_376552.1|	-	0.11	12.2	0.1	0.13	12.0	0.1	1.1	1	0	0	1	1	1	0	Interferon-induced	6-16	family
NTP_transf_2	PF01909.18	gi|15920884|ref|NP_376553.1|	-	4.3e-12	46.2	0.9	6.4e-12	45.6	0.6	1.3	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
DNA_pol_B_palm	PF14792.1	gi|15920884|ref|NP_376553.1|	-	0.0012	18.8	0.0	0.0013	18.7	0.0	1.2	1	0	0	1	1	1	1	DNA	polymerase	beta	palm
DUF294	PF03445.8	gi|15920884|ref|NP_376553.1|	-	0.0062	16.1	0.0	0.011	15.4	0.0	1.4	2	0	0	2	2	2	1	Putative	nucleotidyltransferase	DUF294
DUF1866	PF08952.6	gi|15920884|ref|NP_376553.1|	-	0.072	12.6	0.0	0.093	12.2	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1866)
HEPN	PF05168.9	gi|15920885|ref|NP_376554.1|	-	4.1e-28	97.6	2.6	4.5e-28	97.4	1.8	1.0	1	0	0	1	1	1	1	HEPN	domain
TPR_11	PF13414.1	gi|15920885|ref|NP_376554.1|	-	0.056	13.1	0.5	0.12	11.9	0.3	1.5	1	0	0	1	1	1	0	TPR	repeat
DUF2225	PF09986.4	gi|15920885|ref|NP_376554.1|	-	0.092	12.1	2.2	0.09	12.2	1.1	1.3	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2225)
TPR_1	PF00515.23	gi|15920885|ref|NP_376554.1|	-	0.11	12.1	1.2	0.96	9.1	0.1	2.5	2	1	1	3	3	3	0	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|15920885|ref|NP_376554.1|	-	1	9.2	6.5	0.33	10.8	0.3	3.0	3	0	0	3	3	3	0	Tetratricopeptide	repeat
PmbA_TldD	PF01523.11	gi|15920886|ref|NP_376555.1|	-	6.1e-48	163.5	1.5	8e-48	163.1	1.1	1.2	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
PmbA_TldD	PF01523.11	gi|15920887|ref|NP_376556.1|	-	1.5e-31	109.8	0.8	2.1e-31	109.2	0.6	1.2	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
MFS_1	PF07690.11	gi|15920888|ref|NP_376557.1|	-	2e-54	184.6	43.3	2e-54	184.6	30.0	1.9	2	0	0	2	2	2	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|15920888|ref|NP_376557.1|	-	2.1e-07	29.9	14.5	2.1e-07	29.9	10.1	2.8	2	1	0	2	2	2	1	Sugar	(and	other)	transporter
MFS_3	PF05977.8	gi|15920888|ref|NP_376557.1|	-	0.0024	16.0	6.1	0.0024	16.0	4.2	2.7	3	0	0	3	3	3	2	Transmembrane	secretion	effector
Asp_Glu_race	PF01177.17	gi|15920889|ref|NP_376558.1|	-	8.1e-11	42.2	0.0	9.6e-11	41.9	0.0	1.1	1	0	0	1	1	1	1	Asp/Glu/Hydantoin	racemase
YyzF	PF14116.1	gi|15920890|ref|NP_376559.1|	-	0.024	14.5	0.1	0.024	14.5	0.1	1.8	2	0	0	2	2	2	0	YyzF-like	protein
CDRT4	PF15213.1	gi|15920890|ref|NP_376559.1|	-	0.084	12.9	0.1	5.4	7.1	0.0	2.2	2	0	0	2	2	2	0	CMT1A	duplicated	region	transcript	4	protein
zf-BED	PF02892.10	gi|15920890|ref|NP_376559.1|	-	0.58	9.9	3.8	0.24	11.2	0.4	2.0	2	0	0	2	2	2	0	BED	zinc	finger
GDPD	PF03009.12	gi|15920891|ref|NP_376560.1|	-	3.5e-36	125.0	0.0	1.9e-35	122.6	0.0	1.9	1	1	0	1	1	1	1	Glycerophosphoryl	diester	phosphodiesterase	family
PI-PLC-X	PF00388.14	gi|15920891|ref|NP_376560.1|	-	0.012	15.0	0.0	0.019	14.3	0.0	1.3	1	0	0	1	1	1	0	Phosphatidylinositol-specific	phospholipase	C,	X	domain
Metallophos	PF00149.23	gi|15920892|ref|NP_376561.1|	-	1.7e-07	30.8	4.4	1.1e-06	28.2	3.1	2.3	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|15920892|ref|NP_376561.1|	-	2.6e-07	30.6	0.1	2e-06	27.7	0.1	2.1	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos_3	PF14582.1	gi|15920892|ref|NP_376561.1|	-	4.9e-06	25.8	0.7	0.00011	21.4	0.0	2.6	3	0	0	3	3	3	1	Metallophosphoesterase,	calcineurin	superfamily
DUF1359	PF07097.6	gi|15920892|ref|NP_376561.1|	-	0.042	13.8	0.3	0.11	12.5	0.0	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1359)
PT-HINT	PF07591.6	gi|15920892|ref|NP_376561.1|	-	0.054	13.3	1.7	0.85	9.5	0.3	2.5	1	1	1	2	2	2	0	Pretoxin	HINT	domain
HTH_23	PF13384.1	gi|15920893|ref|NP_376562.1|	-	4.4e-08	32.5	0.1	1e-07	31.3	0.1	1.7	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.1	gi|15920893|ref|NP_376562.1|	-	4.2e-07	29.8	0.1	9.8e-07	28.6	0.1	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
Terminase_5	PF06056.7	gi|15920893|ref|NP_376562.1|	-	3.5e-06	26.4	0.1	7.2e-06	25.4	0.0	1.5	1	0	0	1	1	1	1	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_38	PF13936.1	gi|15920893|ref|NP_376562.1|	-	1.6e-05	24.3	0.0	2.9e-05	23.5	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
DDE_Tnp_IS1	PF03400.8	gi|15920893|ref|NP_376562.1|	-	0.00014	22.0	1.9	0.00032	20.8	1.3	1.6	1	0	0	1	1	1	1	IS1	transposase
Zn_Tnp_IS1	PF03811.8	gi|15920893|ref|NP_376562.1|	-	0.00016	21.1	6.4	0.00031	20.1	4.4	1.5	1	0	0	1	1	1	1	InsA	N-terminal	domain
Sigma70_r4_2	PF08281.7	gi|15920893|ref|NP_376562.1|	-	0.0002	20.7	0.0	0.00038	19.8	0.0	1.4	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_29	PF13551.1	gi|15920893|ref|NP_376562.1|	-	0.00044	20.3	0.0	0.00078	19.5	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_Tnp_1	PF01527.15	gi|15920893|ref|NP_376562.1|	-	0.012	15.4	0.1	0.027	14.4	0.0	1.5	1	0	0	1	1	1	0	Transposase
HTH_40	PF14493.1	gi|15920893|ref|NP_376562.1|	-	0.013	15.7	0.0	0.02	15.0	0.0	1.5	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_Tnp_ISL3	PF13542.1	gi|15920893|ref|NP_376562.1|	-	0.017	14.2	0.0	0.041	13.0	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	transposase	family	ISL3
Zn_Tnp_IS1595	PF12760.2	gi|15920893|ref|NP_376562.1|	-	0.022	14.5	4.2	0.048	13.4	2.9	1.5	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
HTH_Tnp_IS630	PF01710.11	gi|15920893|ref|NP_376562.1|	-	0.037	13.6	2.0	0.038	13.6	0.2	1.9	2	1	0	2	2	2	0	Transposase
OrfB_Zn_ribbon	PF07282.6	gi|15920893|ref|NP_376562.1|	-	0.12	12.0	1.3	0.27	10.9	0.9	1.6	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
GerE	PF00196.14	gi|15920893|ref|NP_376562.1|	-	0.13	11.5	0.0	0.26	10.6	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
DZR	PF12773.2	gi|15920893|ref|NP_376562.1|	-	0.49	10.2	3.5	7.6	6.4	2.4	2.1	1	1	0	1	1	1	0	Double	zinc	ribbon
Zn-ribbon_8	PF09723.5	gi|15920893|ref|NP_376562.1|	-	0.56	10.2	4.3	3.5	7.6	0.4	2.5	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-ISL3	PF14690.1	gi|15920893|ref|NP_376562.1|	-	2.2	8.3	10.9	13	5.8	0.8	2.9	1	1	2	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Nudix_N_2	PF14803.1	gi|15920893|ref|NP_376562.1|	-	5.5	6.7	6.8	13	5.6	4.7	1.6	1	0	0	1	1	1	0	Nudix	N-terminal
Abhydrolase_5	PF12695.2	gi|15920894|ref|NP_376563.1|	-	1.3e-10	41.2	0.0	5.1e-10	39.2	0.0	1.8	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Peptidase_S9	PF00326.16	gi|15920894|ref|NP_376563.1|	-	1.4e-09	37.4	0.0	1.8e-09	37.1	0.0	1.1	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
Abhydrolase_6	PF12697.2	gi|15920894|ref|NP_376563.1|	-	3.7e-08	33.5	0.0	1.4e-06	28.3	0.0	2.6	2	1	0	2	2	2	1	Alpha/beta	hydrolase	family
Abhydrolase_2	PF02230.11	gi|15920894|ref|NP_376563.1|	-	1.3e-05	24.7	0.1	0.00025	20.5	0.0	2.2	2	0	0	2	2	2	1	Phospholipase/Carboxylesterase
DLH	PF01738.13	gi|15920894|ref|NP_376563.1|	-	3.6e-05	23.1	0.0	6.5e-05	22.3	0.0	1.3	1	0	0	1	1	1	1	Dienelactone	hydrolase	family
FSH1	PF03959.8	gi|15920894|ref|NP_376563.1|	-	0.0058	16.1	0.4	0.026	13.9	0.3	1.9	1	1	0	1	1	1	1	Serine	hydrolase	(FSH1)
BAAT_C	PF08840.6	gi|15920894|ref|NP_376563.1|	-	0.018	14.7	0.2	0.74	9.4	0.2	2.1	1	1	0	1	1	1	0	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
Abhydrolase_3	PF07859.8	gi|15920894|ref|NP_376563.1|	-	0.033	13.7	0.0	0.074	12.6	0.0	1.6	1	1	0	1	1	1	0	alpha/beta	hydrolase	fold
Abhydrolase_1	PF00561.15	gi|15920894|ref|NP_376563.1|	-	0.038	13.5	0.5	3.1	7.2	0.0	2.1	1	1	1	2	2	2	0	alpha/beta	hydrolase	fold
Lipase_3	PF01764.20	gi|15920894|ref|NP_376563.1|	-	0.097	12.2	0.0	0.16	11.6	0.0	1.4	1	0	0	1	1	1	0	Lipase	(class	3)
Esterase	PF00756.15	gi|15920894|ref|NP_376563.1|	-	0.12	11.7	0.0	0.17	11.2	0.0	1.2	1	0	0	1	1	1	0	Putative	esterase
4HBT	PF03061.17	gi|15920895|ref|NP_376564.1|	-	5.8e-06	26.3	0.0	7.9e-06	25.9	0.0	1.2	1	0	0	1	1	1	1	Thioesterase	superfamily
4HBT_2	PF13279.1	gi|15920895|ref|NP_376564.1|	-	0.1	13.0	0.0	0.13	12.7	0.0	1.3	1	1	0	1	1	1	0	Thioesterase-like	superfamily
DUF3834	PF12916.2	gi|15920896|ref|NP_376565.1|	-	3.8e-66	221.9	1.1	4.4e-66	221.7	0.8	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3834)
Lactamase_B	PF00753.22	gi|15920897|ref|NP_376566.1|	-	0.00057	19.5	0.5	0.0045	16.6	0.3	2.0	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
COX1	PF00115.15	gi|15920898|ref|NP_376567.1|	-	8.8e-58	195.9	58.3	8.8e-58	195.9	40.4	1.8	1	1	1	2	2	2	2	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
PIRT	PF15099.1	gi|15920899|ref|NP_376568.1|	-	0.41	9.8	2.4	1.3	8.2	0.0	2.4	3	0	0	3	3	3	0	Phosphoinositide-interacting	protein	family
OrfB_IS605	PF01385.14	gi|15920900|ref|NP_376569.1|	-	6.3e-75	251.4	8.0	8.5e-75	251.0	5.6	1.2	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.6	gi|15920900|ref|NP_376569.1|	-	5.6e-19	67.5	0.4	1.5e-18	66.1	0.0	1.9	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
UPF0081	PF03652.10	gi|15920900|ref|NP_376569.1|	-	0.0035	17.4	0.0	0.0067	16.5	0.0	1.5	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0081)
MyTH4	PF00784.12	gi|15920901|ref|NP_376570.1|	-	0.29	11.0	1.7	0.98	9.3	0.2	2.0	1	1	1	2	2	2	0	MyTH4	domain
Y1_Tnp	PF01797.11	gi|15920902|ref|NP_376571.1|	-	2.2e-43	146.9	0.1	2.5e-43	146.7	0.1	1.0	1	0	0	1	1	1	1	Transposase	IS200	like
GAD	PF02938.9	gi|15920902|ref|NP_376571.1|	-	0.12	12.4	0.4	11	6.2	0.0	2.1	2	0	0	2	2	2	0	GAD	domain
DUF2300	PF10062.4	gi|15920903|ref|NP_376572.1|	-	0.11	12.1	0.0	0.2	11.4	0.0	1.3	1	0	0	1	1	1	0	Predicted	secreted	protein	(DUF2300)
Pro_CA	PF00484.14	gi|15920905|ref|NP_376574.1|	-	1.6e-09	37.9	0.7	2.9e-07	30.6	0.4	2.5	2	1	0	2	2	2	2	Carbonic	anhydrase
Maelstrom	PF13017.1	gi|15920905|ref|NP_376574.1|	-	0.068	12.6	1.6	0.098	12.1	1.1	1.2	1	0	0	1	1	1	0	piRNA	pathway	germ-plasm	component
FliP	PF00813.15	gi|15920905|ref|NP_376574.1|	-	0.093	12.4	0.2	0.13	11.9	0.1	1.2	1	0	0	1	1	1	0	FliP	family
Peptidase_C57	PF03290.8	gi|15920906|ref|NP_376575.1|	-	0.0093	14.5	1.8	0.0095	14.4	1.3	1.0	1	0	0	1	1	1	1	Vaccinia	virus	I7	processing	peptidase
Flavoprotein	PF02441.14	gi|15920906|ref|NP_376575.1|	-	0.051	13.2	0.0	0.051	13.2	0.0	1.2	1	0	0	1	1	1	0	Flavoprotein
FlaC_arch	PF05377.6	gi|15920906|ref|NP_376575.1|	-	0.067	13.0	0.3	0.28	11.1	0.1	1.9	2	0	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
HRDC	PF00570.18	gi|15920906|ref|NP_376575.1|	-	0.12	12.0	0.0	0.23	11.2	0.0	1.4	1	0	0	1	1	1	0	HRDC	domain
Nol1_Nop2_Fmu	PF01189.12	gi|15920908|ref|NP_376577.1|	-	3.2e-40	138.2	0.0	4.5e-40	137.7	0.0	1.2	1	0	0	1	1	1	1	NOL1/NOP2/sun	family
Methyltransf_31	PF13847.1	gi|15920908|ref|NP_376577.1|	-	6e-13	48.6	0.4	1.8e-11	43.8	0.0	2.6	2	1	0	2	2	2	1	Methyltransferase	domain
PCMT	PF01135.14	gi|15920908|ref|NP_376577.1|	-	5.5e-06	26.0	0.1	2.2e-05	24.1	0.0	1.8	1	1	1	2	2	2	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_11	PF08241.7	gi|15920908|ref|NP_376577.1|	-	2e-05	25.0	0.0	8.8e-05	22.9	0.0	2.1	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|15920908|ref|NP_376577.1|	-	6.6e-05	23.2	0.0	0.00016	21.9	0.0	1.7	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|15920908|ref|NP_376577.1|	-	0.00022	20.6	0.0	0.00036	19.9	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	small	domain
Ubie_methyltran	PF01209.13	gi|15920908|ref|NP_376577.1|	-	0.00068	18.8	0.0	0.0014	17.8	0.0	1.4	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
GidB	PF02527.10	gi|15920908|ref|NP_376577.1|	-	0.00075	18.6	0.1	0.0012	18.0	0.1	1.3	1	0	0	1	1	1	1	rRNA	small	subunit	methyltransferase	G
Methyltransf_3	PF01596.12	gi|15920908|ref|NP_376577.1|	-	0.018	14.1	0.0	0.041	12.9	0.0	1.6	1	0	0	1	1	1	0	O-methyltransferase
Methyltransf_18	PF12847.2	gi|15920908|ref|NP_376577.1|	-	0.019	15.5	0.0	0.036	14.6	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
FtsJ	PF01728.14	gi|15920908|ref|NP_376577.1|	-	0.048	13.6	0.0	0.13	12.1	0.0	1.7	1	1	0	1	1	1	0	FtsJ-like	methyltransferase
UPF0020	PF01170.13	gi|15920908|ref|NP_376577.1|	-	0.13	11.7	0.7	6.4	6.3	0.0	2.5	2	1	0	2	2	2	0	Putative	RNA	methylase	family	UPF0020
TENA_THI-4	PF03070.11	gi|15920909|ref|NP_376578.1|	-	3.4e-31	108.6	3.2	4.3e-31	108.3	2.2	1.0	1	0	0	1	1	1	1	TENA/THI-4/PQQC	family
DUF2989	PF11207.3	gi|15920909|ref|NP_376578.1|	-	0.013	14.9	1.1	0.085	12.3	0.0	2.1	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2989)
DUF929	PF06053.6	gi|15920910|ref|NP_376579.1|	-	1e-63	214.7	13.9	1.2e-63	214.5	9.7	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF929)
Pkinase	PF00069.20	gi|15920911|ref|NP_376580.1|	-	9.3e-34	116.7	0.0	1.3e-33	116.2	0.0	1.1	1	0	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|15920911|ref|NP_376580.1|	-	1.1e-14	54.1	0.0	2.2e-14	53.1	0.0	1.4	1	1	0	1	1	1	1	Protein	tyrosine	kinase
Kinase-like	PF14531.1	gi|15920911|ref|NP_376580.1|	-	0.073	12.0	0.0	0.44	9.4	0.0	2.0	1	1	0	1	1	1	0	Kinase-like
Kdo	PF06293.9	gi|15920911|ref|NP_376580.1|	-	0.21	10.5	0.0	0.36	9.8	0.0	1.3	1	0	0	1	1	1	0	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
Pyr_redox_2	PF07992.9	gi|15920912|ref|NP_376581.1|	-	3.1e-32	112.0	0.0	5.5e-32	111.2	0.0	1.7	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|15920912|ref|NP_376581.1|	-	2.4e-17	62.9	0.1	4.6e-17	62.0	0.1	1.5	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.22	gi|15920912|ref|NP_376581.1|	-	6.2e-12	45.7	2.2	9.8e-12	45.1	0.1	2.3	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|15920912|ref|NP_376581.1|	-	9.3e-12	45.4	0.0	1.1e-08	35.3	0.0	2.8	1	1	1	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|15920912|ref|NP_376581.1|	-	1.7e-09	37.0	1.1	6.2e-06	25.3	0.0	3.4	3	1	0	3	3	3	2	Glucose	inhibited	division	protein	A
K_oxygenase	PF13434.1	gi|15920912|ref|NP_376581.1|	-	7.1e-08	31.7	0.0	0.0081	15.1	0.0	2.3	2	0	0	2	2	2	2	L-lysine	6-monooxygenase	(NADPH-requiring)
FAD_binding_2	PF00890.19	gi|15920912|ref|NP_376581.1|	-	0.00066	18.6	0.7	0.0018	17.2	0.1	1.9	2	0	0	2	2	2	1	FAD	binding	domain
FAD_oxidored	PF12831.2	gi|15920912|ref|NP_376581.1|	-	0.0007	18.7	0.0	0.0011	18.0	0.0	1.4	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
HI0933_like	PF03486.9	gi|15920912|ref|NP_376581.1|	-	0.0012	17.4	0.8	0.028	12.8	0.2	2.8	2	1	0	3	3	3	1	HI0933-like	protein
DAO	PF01266.19	gi|15920912|ref|NP_376581.1|	-	0.0012	17.8	3.4	1	8.1	0.0	3.9	3	1	1	4	4	4	2	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|15920912|ref|NP_376581.1|	-	0.0018	18.2	0.1	0.005	16.8	0.1	1.8	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Lycopene_cycl	PF05834.7	gi|15920912|ref|NP_376581.1|	-	0.0031	16.4	0.0	0.015	14.2	0.0	2.0	3	0	0	3	3	3	1	Lycopene	cyclase	protein
Thi4	PF01946.12	gi|15920912|ref|NP_376581.1|	-	0.0088	15.1	0.1	0.035	13.2	0.0	1.9	2	0	0	2	2	2	1	Thi4	family
3HCDH_N	PF02737.13	gi|15920912|ref|NP_376581.1|	-	0.035	13.7	0.0	0.62	9.6	0.0	2.3	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Methyltransf_25	PF13649.1	gi|15920913|ref|NP_376582.1|	-	6e-13	49.0	0.0	8.7e-13	48.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|15920913|ref|NP_376582.1|	-	1.4e-08	34.4	0.1	2e-08	33.9	0.1	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|15920913|ref|NP_376582.1|	-	1.5e-05	25.5	0.0	2.3e-05	24.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|15920913|ref|NP_376582.1|	-	8.4e-05	22.9	0.0	0.00014	22.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_16	PF10294.4	gi|15920913|ref|NP_376582.1|	-	0.0023	17.4	0.0	0.0035	16.8	0.0	1.4	1	0	0	1	1	1	1	Putative	methyltransferase
Ubie_methyltran	PF01209.13	gi|15920913|ref|NP_376582.1|	-	0.038	13.1	0.0	0.048	12.7	0.0	1.2	1	0	0	1	1	1	0	ubiE/COQ5	methyltransferase	family
Methyltransf_23	PF13489.1	gi|15920913|ref|NP_376582.1|	-	0.076	12.7	0.0	0.094	12.4	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
YjeF_N	PF03853.10	gi|15920913|ref|NP_376582.1|	-	0.14	11.7	0.0	0.24	10.9	0.0	1.4	1	1	0	1	1	1	0	YjeF-related	protein	N-terminus
PIN	PF01850.16	gi|15920915|ref|NP_376584.1|	-	0.001	19.4	0.0	0.0011	19.3	0.0	1.0	1	0	0	1	1	1	1	PIN	domain
Nuc-transf	PF10127.4	gi|15920916|ref|NP_376585.1|	-	0.0063	15.9	1.3	0.0067	15.8	0.9	1.1	1	0	0	1	1	1	1	Predicted	nucleotidyltransferase
DUF3811	PF11656.3	gi|15920916|ref|NP_376585.1|	-	0.23	11.5	4.1	0.41	10.7	2.8	1.3	1	1	0	1	1	1	0	YjbD	family	(DUF3811)
RHH_1	PF01402.16	gi|15920916|ref|NP_376585.1|	-	0.71	9.8	7.9	1.2	9.1	0.6	2.3	2	0	0	2	2	2	0	Ribbon-helix-helix	protein,	copG	family
RRF	PF01765.14	gi|15920916|ref|NP_376585.1|	-	2.9	7.3	6.0	6.6	6.1	0.3	2.0	1	1	1	2	2	2	0	Ribosome	recycling	factor
HEPN	PF05168.9	gi|15920917|ref|NP_376586.1|	-	1.1e-34	118.8	0.1	1.5e-34	118.4	0.0	1.1	1	0	0	1	1	1	1	HEPN	domain
NTP_transf_2	PF01909.18	gi|15920918|ref|NP_376587.1|	-	1.3e-09	38.2	0.5	1.9e-09	37.7	0.4	1.3	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
Nuc-transf	PF10127.4	gi|15920918|ref|NP_376587.1|	-	0.083	12.2	0.0	0.094	12.0	0.0	1.1	1	0	0	1	1	1	0	Predicted	nucleotidyltransferase
Sugar_tr	PF00083.19	gi|15920919|ref|NP_376588.1|	-	1.5e-42	145.7	27.8	2.7e-42	144.9	19.3	1.3	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|15920919|ref|NP_376588.1|	-	3.1e-20	72.2	31.4	3.1e-20	72.2	21.7	2.0	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
Radical_SAM	PF04055.16	gi|15920920|ref|NP_376589.1|	-	2.2e-21	76.7	0.0	4.4e-21	75.7	0.0	1.5	1	0	0	1	1	1	1	Radical	SAM	superfamily
Acetyltransf_1	PF00583.19	gi|15920920|ref|NP_376589.1|	-	3e-07	30.3	0.0	7.9e-07	29.0	0.0	1.8	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|15920920|ref|NP_376589.1|	-	0.0027	17.8	0.3	0.017	15.2	0.2	2.3	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
HEPN	PF05168.9	gi|15920921|ref|NP_376590.1|	-	8.4e-22	77.2	0.8	9.1e-22	77.1	0.6	1.0	1	0	0	1	1	1	1	HEPN	domain
CPSF73-100_C	PF11718.3	gi|15920921|ref|NP_376590.1|	-	0.024	13.9	0.1	0.032	13.5	0.0	1.1	1	0	0	1	1	1	0	Pre-mRNA	3'-end-processing	endonuclease	polyadenylation	factor	C-term
KSHV_K1	PF11049.3	gi|15920921|ref|NP_376590.1|	-	0.087	12.8	0.0	0.13	12.3	0.0	1.3	1	0	0	1	1	1	0	Glycoprotein	K1	of	Kaposi's	sarcoma-associated	herpes	virus
2-Hacid_dh_C	PF02826.14	gi|15920922|ref|NP_376591.1|	-	3.4e-35	120.7	0.0	5.9e-35	120.0	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.25	gi|15920922|ref|NP_376591.1|	-	9.3e-15	54.2	0.0	1.1e-14	54.0	0.0	1.0	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
AdoHcyase_NAD	PF00670.16	gi|15920922|ref|NP_376591.1|	-	0.00021	21.1	0.2	0.00064	19.5	0.1	1.9	1	1	1	2	2	2	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
ThiF	PF00899.16	gi|15920922|ref|NP_376591.1|	-	0.001	18.8	1.5	0.13	12.0	0.4	2.3	1	1	1	2	2	2	2	ThiF	family
Shikimate_DH	PF01488.15	gi|15920922|ref|NP_376591.1|	-	0.0099	15.9	0.4	0.095	12.8	0.3	2.2	1	1	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
Pyr_redox	PF00070.22	gi|15920922|ref|NP_376591.1|	-	0.018	15.4	0.1	0.31	11.4	0.0	2.3	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_10	PF13460.1	gi|15920922|ref|NP_376591.1|	-	0.092	12.7	0.0	0.18	11.8	0.0	1.5	1	0	0	1	1	1	0	NADH(P)-binding
AA_permease_2	PF13520.1	gi|15920923|ref|NP_376592.1|	-	1.4e-24	86.4	66.3	1.7e-24	86.1	45.8	1.2	1	1	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|15920923|ref|NP_376592.1|	-	3.2e-09	35.6	58.8	4.4e-09	35.2	40.8	1.1	1	0	0	1	1	1	1	Amino	acid	permease
DUF3290	PF11694.3	gi|15920923|ref|NP_376592.1|	-	0.065	12.9	0.2	0.065	12.9	0.2	2.9	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3290)
DUF2663	PF10864.3	gi|15920923|ref|NP_376592.1|	-	3.2	7.9	5.1	23	5.1	0.1	2.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2663)
DUF504	PF04457.7	gi|15920925|ref|NP_376594.1|	-	2.3e-18	66.0	2.6	3.2e-18	65.6	1.8	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF504)
PP-binding_2	PF14573.1	gi|15920925|ref|NP_376594.1|	-	0.068	13.2	0.2	0.36	10.8	0.0	1.9	1	1	1	2	2	2	0	Acyl-carrier
bPH_5	PF10882.3	gi|15920925|ref|NP_376594.1|	-	0.1	12.4	0.5	1.1	9.0	0.0	2.1	1	1	1	2	2	2	0	Bacterial	PH	domain
Nitroreductase	PF00881.19	gi|15920926|ref|NP_376595.1|	-	9.9e-29	100.2	0.0	1.2e-28	99.9	0.0	1.1	1	0	0	1	1	1	1	Nitroreductase	family
DUF2537	PF10801.3	gi|15920926|ref|NP_376595.1|	-	0.017	15.2	0.7	0.031	14.3	0.5	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2537)
PPDK_N	PF01326.14	gi|15920927|ref|NP_376596.1|	-	5.9e-69	232.6	0.0	7.6e-69	232.2	0.0	1.0	1	0	0	1	1	1	1	Pyruvate	phosphate	dikinase,	PEP/pyruvate	binding	domain
CbiA	PF01656.18	gi|15920927|ref|NP_376596.1|	-	0.042	13.2	0.1	0.13	11.6	0.0	1.6	1	1	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
HTH_27	PF13463.1	gi|15920928|ref|NP_376597.1|	-	1.1e-08	35.2	0.2	1.3e-08	34.9	0.1	1.1	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_24	PF13412.1	gi|15920928|ref|NP_376597.1|	-	7.1e-07	28.5	0.5	9.8e-07	28.0	0.3	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_36	PF13730.1	gi|15920928|ref|NP_376597.1|	-	4.4e-06	26.7	0.3	7.8e-06	25.9	0.2	1.4	1	1	0	1	1	1	1	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|15920928|ref|NP_376597.1|	-	1.4e-05	24.6	0.2	1.7e-05	24.3	0.2	1.2	1	0	0	1	1	1	1	HTH	domain
MarR	PF01047.17	gi|15920928|ref|NP_376597.1|	-	3.9e-05	23.2	0.2	4.5e-05	23.0	0.1	1.1	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.2	gi|15920928|ref|NP_376597.1|	-	4.9e-05	22.9	0.0	6.3e-05	22.5	0.0	1.1	1	0	0	1	1	1	1	MarR	family
TFIIE_alpha	PF02002.12	gi|15920928|ref|NP_376597.1|	-	0.00013	21.4	0.4	0.00015	21.1	0.3	1.2	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HTH_Mga	PF08280.6	gi|15920928|ref|NP_376597.1|	-	0.00026	20.6	0.2	0.00038	20.1	0.1	1.4	1	0	0	1	1	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HxlR	PF01638.12	gi|15920928|ref|NP_376597.1|	-	0.00027	20.4	0.4	0.00033	20.2	0.3	1.1	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_20	PF12840.2	gi|15920928|ref|NP_376597.1|	-	0.00049	19.8	0.0	0.00074	19.2	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
DUF387	PF04079.11	gi|15920928|ref|NP_376597.1|	-	0.0018	17.6	0.2	0.0021	17.4	0.1	1.0	1	0	0	1	1	1	1	Putative	transcriptional	regulators	(Ypuh-like)
HTH_12	PF08461.5	gi|15920928|ref|NP_376597.1|	-	0.002	17.8	0.4	0.0026	17.4	0.3	1.4	1	1	0	1	1	1	1	Ribonuclease	R	winged-helix	domain
RNA_pol_Rpc34	PF05158.7	gi|15920928|ref|NP_376597.1|	-	0.0021	17.3	0.6	0.0021	17.3	0.4	1.0	1	0	0	1	1	1	1	RNA	polymerase	Rpc34	subunit
HTH_5	PF01022.15	gi|15920928|ref|NP_376597.1|	-	0.0024	17.5	0.3	0.0043	16.7	0.0	1.6	2	0	0	2	2	1	1	Bacterial	regulatory	protein,	arsR	family
GntR	PF00392.16	gi|15920928|ref|NP_376597.1|	-	0.0035	16.7	0.1	0.0047	16.3	0.1	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
MerR	PF00376.18	gi|15920928|ref|NP_376597.1|	-	0.004	16.6	0.2	0.0095	15.4	0.0	1.7	2	0	0	2	2	1	1	MerR	family	regulatory	protein
HTH_DeoR	PF08220.7	gi|15920928|ref|NP_376597.1|	-	0.0061	16.0	0.1	0.0098	15.4	0.1	1.3	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
MerR_1	PF13411.1	gi|15920928|ref|NP_376597.1|	-	0.0076	15.9	0.2	0.012	15.3	0.1	1.5	1	1	0	1	1	1	1	MerR	HTH	family	regulatory	protein
Rrf2	PF02082.15	gi|15920928|ref|NP_376597.1|	-	0.0082	16.2	0.1	0.016	15.2	0.1	1.5	1	1	1	2	2	2	1	Transcriptional	regulator
HTH_34	PF13601.1	gi|15920928|ref|NP_376597.1|	-	0.011	15.7	0.1	0.013	15.5	0.1	1.1	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
RepL	PF05732.6	gi|15920928|ref|NP_376597.1|	-	0.021	14.0	0.1	0.028	13.6	0.1	1.2	1	0	0	1	1	1	0	Firmicute	plasmid	replication	protein	(RepL)
TrmB	PF01978.14	gi|15920928|ref|NP_376597.1|	-	0.025	14.2	0.2	0.031	14.0	0.1	1.3	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
DUF2540	PF10802.3	gi|15920928|ref|NP_376597.1|	-	0.027	14.1	0.1	0.1	12.2	0.0	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2540)
AsnC_trans_reg	PF01037.16	gi|15920928|ref|NP_376597.1|	-	0.052	13.2	0.1	0.12	12.0	0.0	1.6	2	0	0	2	2	2	0	AsnC	family
Sulfolobus_pRN	PF05584.6	gi|15920928|ref|NP_376597.1|	-	0.064	13.2	2.4	0.076	12.9	1.7	1.2	1	0	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
Rio2_N	PF09202.6	gi|15920928|ref|NP_376597.1|	-	0.064	13.3	0.1	0.093	12.8	0.1	1.4	1	1	0	1	1	1	0	Rio2,	N-terminal
RPA_C	PF08784.6	gi|15920928|ref|NP_376597.1|	-	0.1	12.9	0.0	0.14	12.5	0.0	1.2	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
HTH_8	PF02954.14	gi|15920928|ref|NP_376597.1|	-	0.11	12.1	0.1	0.2	11.2	0.1	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	Fis	family
HrcA_DNA-bdg	PF03444.10	gi|15920928|ref|NP_376597.1|	-	0.11	11.9	0.1	0.15	11.5	0.0	1.2	1	0	0	1	1	1	0	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
FaeA	PF04703.7	gi|15920928|ref|NP_376597.1|	-	0.12	12.4	0.0	0.15	12.2	0.0	1.2	1	0	0	1	1	1	0	FaeA-like	protein
HTH_IclR	PF09339.5	gi|15920928|ref|NP_376597.1|	-	0.13	11.8	0.1	3.1	7.4	0.0	2.1	1	1	1	2	2	2	0	IclR	helix-turn-helix	domain
DUF373	PF04123.8	gi|15920929|ref|NP_376598.1|	-	0.027	13.5	7.6	0.035	13.1	5.3	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF373)
Bax1-I	PF01027.15	gi|15920929|ref|NP_376598.1|	-	0.2	11.2	14.9	0.059	12.9	7.3	1.9	1	1	1	2	2	2	0	Inhibitor	of	apoptosis-promoting	Bax1
2TM	PF13239.1	gi|15920929|ref|NP_376598.1|	-	3.5	7.7	13.8	0.35	10.9	2.6	2.2	1	1	1	2	2	2	0	2TM	domain
PRA1	PF03208.14	gi|15920929|ref|NP_376598.1|	-	4.6	6.5	9.0	9.2	5.5	6.0	1.6	1	1	0	1	1	1	0	PRA1	family	protein
ABC_tran	PF00005.22	gi|15920930|ref|NP_376599.1|	-	1.4e-30	106.3	0.0	2e-30	105.9	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|15920930|ref|NP_376599.1|	-	2.7e-17	62.8	0.3	4.5e-17	62.1	0.2	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|15920930|ref|NP_376599.1|	-	3.5e-08	33.7	2.1	0.0012	18.9	0.2	2.1	1	1	1	2	2	2	2	AAA	domain
AAA_22	PF13401.1	gi|15920930|ref|NP_376599.1|	-	0.00023	21.3	0.9	0.0031	17.6	0.7	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|15920930|ref|NP_376599.1|	-	0.0012	18.3	0.1	0.002	17.6	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
T2SE	PF00437.15	gi|15920930|ref|NP_376599.1|	-	0.0014	17.5	0.1	0.0025	16.7	0.1	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
SMC_N	PF02463.14	gi|15920930|ref|NP_376599.1|	-	0.0028	16.9	0.2	0.027	13.7	0.1	2.0	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_16	PF13191.1	gi|15920930|ref|NP_376599.1|	-	0.0075	16.2	0.0	0.012	15.5	0.0	1.4	1	0	0	1	1	1	1	AAA	ATPase	domain
Mg_chelatase	PF01078.16	gi|15920930|ref|NP_376599.1|	-	0.0078	15.3	0.0	0.016	14.3	0.0	1.5	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
DUF258	PF03193.11	gi|15920930|ref|NP_376599.1|	-	0.015	14.4	0.1	0.026	13.7	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_23	PF13476.1	gi|15920930|ref|NP_376599.1|	-	0.018	15.4	1.0	0.056	13.7	0.0	1.9	1	1	1	2	2	2	0	AAA	domain
NB-ARC	PF00931.17	gi|15920930|ref|NP_376599.1|	-	0.022	13.6	0.1	0.036	12.9	0.1	1.3	1	0	0	1	1	1	0	NB-ARC	domain
UPF0079	PF02367.12	gi|15920930|ref|NP_376599.1|	-	0.029	13.9	0.1	0.057	13.0	0.1	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
MobB	PF03205.9	gi|15920930|ref|NP_376599.1|	-	0.031	13.9	0.4	0.055	13.1	0.2	1.4	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NACHT	PF05729.7	gi|15920930|ref|NP_376599.1|	-	0.051	13.2	0.5	0.084	12.5	0.3	1.3	1	0	0	1	1	1	0	NACHT	domain
AAA_18	PF13238.1	gi|15920930|ref|NP_376599.1|	-	0.061	13.6	1.9	0.21	11.8	1.2	1.9	2	1	0	2	2	2	0	AAA	domain
KaiC	PF06745.8	gi|15920930|ref|NP_376599.1|	-	0.068	12.2	0.2	0.3	10.1	0.0	2.0	2	0	0	2	2	2	0	KaiC
Zeta_toxin	PF06414.7	gi|15920930|ref|NP_376599.1|	-	0.069	12.2	0.0	0.11	11.6	0.0	1.2	1	0	0	1	1	1	0	Zeta	toxin
AAA_33	PF13671.1	gi|15920930|ref|NP_376599.1|	-	0.079	12.8	0.3	0.14	12.0	0.2	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_15	PF13175.1	gi|15920930|ref|NP_376599.1|	-	0.088	11.8	0.4	0.2	10.6	0.1	1.6	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_19	PF13245.1	gi|15920930|ref|NP_376599.1|	-	0.14	11.8	0.1	1.9	8.2	0.0	2.2	2	0	0	2	2	2	0	Part	of	AAA	domain
Gtr1_RagA	PF04670.7	gi|15920930|ref|NP_376599.1|	-	0.15	11.1	0.1	0.26	10.3	0.1	1.3	1	0	0	1	1	1	0	Gtr1/RagA	G	protein	conserved	region
G-alpha	PF00503.15	gi|15920930|ref|NP_376599.1|	-	0.15	10.7	0.0	0.16	10.5	0.0	1.1	1	0	0	1	1	1	0	G-protein	alpha	subunit
AAA_10	PF12846.2	gi|15920930|ref|NP_376599.1|	-	0.15	11.4	0.5	0.28	10.5	0.2	1.6	1	1	1	2	2	2	0	AAA-like	domain
AAA_17	PF13207.1	gi|15920930|ref|NP_376599.1|	-	0.24	12.1	1.5	0.55	11.0	1.0	1.7	1	1	0	1	1	1	0	AAA	domain
ABC_tran	PF00005.22	gi|15920931|ref|NP_376600.1|	-	4.9e-29	101.3	0.0	7.2e-29	100.8	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|15920931|ref|NP_376600.1|	-	1.4e-25	89.3	0.2	2.4e-25	88.6	0.1	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|15920931|ref|NP_376600.1|	-	1.6e-12	47.9	2.9	6.6e-12	45.9	2.0	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|15920931|ref|NP_376600.1|	-	2.1e-05	23.9	0.1	4e-05	23.0	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.1	gi|15920931|ref|NP_376600.1|	-	2.4e-05	24.5	0.2	9.3e-05	22.5	0.1	1.8	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|15920931|ref|NP_376600.1|	-	4e-05	22.9	1.9	0.0032	16.7	1.3	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|15920931|ref|NP_376600.1|	-	5e-05	22.5	3.1	0.0049	15.9	0.3	2.1	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|15920931|ref|NP_376600.1|	-	0.00025	21.4	0.7	0.00044	20.6	0.5	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_25	PF13481.1	gi|15920931|ref|NP_376600.1|	-	0.0008	18.8	0.2	0.0042	16.5	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|15920931|ref|NP_376600.1|	-	0.0014	18.6	0.2	0.0055	16.7	0.0	1.8	2	0	0	2	2	2	1	AAA	ATPase	domain
PRK	PF00485.13	gi|15920931|ref|NP_376600.1|	-	0.0027	17.2	0.0	0.0049	16.4	0.0	1.6	1	0	0	1	1	1	1	Phosphoribulokinase	/	Uridine	kinase	family
FtsK_SpoIIIE	PF01580.13	gi|15920931|ref|NP_376600.1|	-	0.0039	16.6	0.1	0.009	15.4	0.0	1.6	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
DUF87	PF01935.12	gi|15920931|ref|NP_376600.1|	-	0.0051	16.6	0.8	0.11	12.3	0.2	2.1	1	1	1	2	2	2	1	Domain	of	unknown	function	DUF87
AAA_18	PF13238.1	gi|15920931|ref|NP_376600.1|	-	0.0095	16.2	0.1	0.022	15.0	0.0	1.7	2	0	0	2	2	1	1	AAA	domain
NTPase_1	PF03266.10	gi|15920931|ref|NP_376600.1|	-	0.011	15.4	0.6	0.044	13.4	0.1	2.1	2	0	0	2	2	2	0	NTPase
AAA_17	PF13207.1	gi|15920931|ref|NP_376600.1|	-	0.012	16.4	0.2	0.024	15.4	0.2	1.8	1	1	0	1	1	1	0	AAA	domain
NB-ARC	PF00931.17	gi|15920931|ref|NP_376600.1|	-	0.017	14.0	0.0	0.029	13.2	0.0	1.3	1	0	0	1	1	1	0	NB-ARC	domain
MobB	PF03205.9	gi|15920931|ref|NP_376600.1|	-	0.033	13.8	0.1	0.082	12.6	0.1	1.7	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NACHT	PF05729.7	gi|15920931|ref|NP_376600.1|	-	0.034	13.8	0.3	0.12	11.9	0.0	1.9	2	0	0	2	2	2	0	NACHT	domain
ArgK	PF03308.11	gi|15920931|ref|NP_376600.1|	-	0.034	12.9	0.0	0.062	12.0	0.0	1.3	1	0	0	1	1	1	0	ArgK	protein
ATP-synt_ab	PF00006.20	gi|15920931|ref|NP_376600.1|	-	0.036	13.5	0.0	0.04	13.4	0.0	1.3	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
UPF0079	PF02367.12	gi|15920931|ref|NP_376600.1|	-	0.038	13.6	0.0	0.077	12.6	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
Miro	PF08477.8	gi|15920931|ref|NP_376600.1|	-	0.04	14.3	0.5	0.085	13.3	0.4	1.7	1	1	0	1	1	1	0	Miro-like	protein
DUF258	PF03193.11	gi|15920931|ref|NP_376600.1|	-	0.044	12.9	0.0	0.074	12.2	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_13	PF13166.1	gi|15920931|ref|NP_376600.1|	-	0.045	12.2	0.1	3.8	5.8	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
KaiC	PF06745.8	gi|15920931|ref|NP_376600.1|	-	0.058	12.5	0.1	0.13	11.3	0.0	1.5	1	0	0	1	1	1	0	KaiC
KAP_NTPase	PF07693.9	gi|15920931|ref|NP_376600.1|	-	0.06	12.3	0.1	0.13	11.2	0.1	1.7	1	1	0	1	1	1	0	KAP	family	P-loop	domain
MMR_HSR1	PF01926.18	gi|15920931|ref|NP_376600.1|	-	0.061	13.2	0.1	0.11	12.4	0.1	1.6	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_5	PF07728.9	gi|15920931|ref|NP_376600.1|	-	0.062	13.0	0.0	0.15	11.7	0.0	1.6	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
Sigma54_activat	PF00158.21	gi|15920931|ref|NP_376600.1|	-	0.12	11.8	0.0	0.22	10.9	0.0	1.5	1	0	0	1	1	1	0	Sigma-54	interaction	domain
APS_kinase	PF01583.15	gi|15920931|ref|NP_376600.1|	-	0.15	11.7	0.0	0.51	9.9	0.0	1.9	2	0	0	2	2	2	0	Adenylylsulphate	kinase
BPD_transp_1	PF00528.17	gi|15920932|ref|NP_376601.1|	-	1.3e-17	63.8	15.8	1.3e-17	63.8	11.0	2.3	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.2	gi|15920932|ref|NP_376601.1|	-	0.00018	20.8	4.4	0.00018	20.8	3.1	2.8	2	1	0	2	2	2	1	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
BPD_transp_1	PF00528.17	gi|15920933|ref|NP_376602.1|	-	5e-31	107.6	17.1	5e-31	107.6	11.9	2.2	2	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
E1-E2_ATPase	PF00122.15	gi|15920933|ref|NP_376602.1|	-	1	8.3	6.2	0.086	11.8	0.5	2.0	2	1	1	3	3	3	0	E1-E2	ATPase
SBP_bac_5	PF00496.17	gi|15920935|ref|NP_376604.1|	-	1.8e-25	89.5	14.1	5.8e-14	51.6	1.6	2.3	2	0	0	2	2	2	2	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
Rifin_STEVOR	PF02009.11	gi|15920935|ref|NP_376604.1|	-	0.0022	17.6	3.6	0.0033	17.1	2.5	1.3	1	0	0	1	1	1	1	Rifin/stevor	family
TMEM154	PF15102.1	gi|15920935|ref|NP_376604.1|	-	0.28	10.9	7.5	0.56	9.9	5.2	1.5	1	0	0	1	1	1	0	TMEM154	protein	family
MFS_1	PF07690.11	gi|15920936|ref|NP_376605.1|	-	2.8e-36	124.9	64.9	4.5e-25	88.1	19.1	3.4	1	1	1	3	3	3	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|15920936|ref|NP_376605.1|	-	1.2e-06	27.4	40.8	2e-05	23.4	11.9	3.3	2	1	1	3	3	3	2	Sugar	(and	other)	transporter
MFS_3	PF05977.8	gi|15920936|ref|NP_376605.1|	-	0.00047	18.4	2.3	0.00047	18.4	1.6	2.1	2	0	0	2	2	2	1	Transmembrane	secretion	effector
DUF2583	PF10762.4	gi|15920936|ref|NP_376605.1|	-	0.051	13.7	0.2	0.051	13.7	0.1	4.2	5	0	0	5	5	5	0	Protein	of	unknown	function	(DUF2583)
DUF1129	PF06570.6	gi|15920936|ref|NP_376605.1|	-	0.4	9.9	10.5	0.015	14.5	1.8	2.5	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1129)
zf-ribbon_3	PF13248.1	gi|15920937|ref|NP_376606.1|	-	1.1e-07	30.7	2.1	1.7e-07	30.2	1.4	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|15920937|ref|NP_376606.1|	-	4.4e-05	22.8	1.7	6.7e-05	22.2	1.2	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|15920937|ref|NP_376606.1|	-	4.6e-05	23.1	0.8	6.2e-05	22.7	0.6	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-RanBP	PF00641.13	gi|15920937|ref|NP_376606.1|	-	0.073	12.1	1.9	0.11	11.5	1.3	1.2	1	0	0	1	1	1	0	Zn-finger	in	Ran	binding	protein	and	others
UPF0547	PF10571.4	gi|15920937|ref|NP_376606.1|	-	0.24	11.1	4.1	7.7	6.3	0.2	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
Nudix_N_2	PF14803.1	gi|15920937|ref|NP_376606.1|	-	0.44	10.2	2.6	2	8.1	0.1	2.2	2	0	0	2	2	2	0	Nudix	N-terminal
RNA_POL_M_15KD	PF02150.11	gi|15920937|ref|NP_376606.1|	-	1.3	8.7	6.8	0.8	9.4	0.1	2.3	1	1	1	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
Ribosomal_L13e	PF01294.13	gi|15920938|ref|NP_376607.1|	-	2.6e-08	33.5	0.4	2.8e-08	33.4	0.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L13e
MerR_1	PF13411.1	gi|15920938|ref|NP_376607.1|	-	0.094	12.5	1.8	1.9	8.3	0.0	2.2	1	1	1	2	2	2	0	MerR	HTH	family	regulatory	protein
DUF724	PF05266.9	gi|15920938|ref|NP_376607.1|	-	0.17	11.4	3.4	0.21	11.1	2.4	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF724)
Asp_protease_2	PF13650.1	gi|15920939|ref|NP_376608.1|	-	0.032	14.7	0.0	0.044	14.2	0.0	1.3	1	1	0	1	1	1	0	Aspartyl	protease
PepSY	PF03413.14	gi|15920940|ref|NP_376609.1|	-	0.24	12.0	1.0	1.4	9.5	0.2	2.4	2	1	0	2	2	2	0	Peptidase	propeptide	and	YPEB	domain
MORN_2	PF07661.8	gi|15920940|ref|NP_376609.1|	-	0.3	11.2	1.7	7.2	6.9	0.0	3.2	3	0	0	3	3	3	0	MORN	repeat	variant
Sugar_tr	PF00083.19	gi|15920943|ref|NP_376612.1|	-	4.3e-47	160.7	26.7	8.4e-46	156.4	18.5	2.9	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|15920943|ref|NP_376612.1|	-	3.1e-37	128.1	86.1	1.1e-30	106.5	34.1	2.6	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
OATP	PF03137.15	gi|15920943|ref|NP_376612.1|	-	4.9e-06	24.8	3.1	4.9e-06	24.8	2.2	3.2	2	1	1	3	3	3	2	Organic	Anion	Transporter	Polypeptide	(OATP)	family
MFS_2	PF13347.1	gi|15920943|ref|NP_376612.1|	-	6.8e-05	21.4	28.9	0.0007	18.1	3.3	3.3	1	1	0	3	3	3	2	MFS/sugar	transport	protein
DUF1228	PF06779.9	gi|15920943|ref|NP_376612.1|	-	0.00038	20.4	13.3	0.03	14.3	0.6	3.7	4	0	0	4	4	4	2	Protein	of	unknown	function	(DUF1228)
MFS_1_like	PF12832.2	gi|15920943|ref|NP_376612.1|	-	0.0089	15.7	3.9	0.8	9.5	1.1	3.6	2	0	0	2	2	2	1	MFS_1	like	family
ADC	PF06314.6	gi|15920944|ref|NP_376613.1|	-	1.8e-58	197.7	0.0	2.1e-58	197.4	0.0	1.0	1	0	0	1	1	1	1	Acetoacetate	decarboxylase	(ADC)
DDE_Tnp_2	PF04693.7	gi|15920945|ref|NP_376614.1|	-	3e-52	177.6	2.4	9.7e-35	120.1	0.6	2.1	2	0	0	2	2	2	2	Archaeal	putative	transposase	ISC1217
DDE_5	PF13546.1	gi|15920945|ref|NP_376614.1|	-	0.039	12.7	0.0	0.068	12.0	0.0	1.5	1	0	0	1	1	1	0	DDE	superfamily	endonuclease
B-block_TFIIIC	PF04182.7	gi|15920945|ref|NP_376614.1|	-	0.072	12.9	6.0	0.44	10.4	0.1	2.8	2	1	0	2	2	2	0	B-block	binding	subunit	of	TFIIIC
Pyr_redox	PF00070.22	gi|15920945|ref|NP_376614.1|	-	0.079	13.3	0.1	0.23	11.9	0.1	1.8	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
DUF1256	PF06866.6	gi|15920945|ref|NP_376614.1|	-	3	7.0	6.9	20	4.3	0.1	3.0	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1256)
DDE_Tnp_2	PF04693.7	gi|15920946|ref|NP_376615.1|	-	7.4e-60	202.6	0.1	8.7e-60	202.4	0.1	1.1	1	0	0	1	1	1	1	Archaeal	putative	transposase	ISC1217
DDE_Tnp_1	PF01609.16	gi|15920946|ref|NP_376615.1|	-	2.7e-05	23.8	0.0	2.9e-05	23.7	0.0	1.2	1	0	0	1	1	1	1	Transposase	DDE	domain
PaREP1	PF05942.6	gi|15920947|ref|NP_376616.1|	-	6.7e-30	103.3	0.4	8.4e-30	102.9	0.3	1.1	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
HEPN	PF05168.9	gi|15920947|ref|NP_376616.1|	-	0.034	14.0	2.4	0.056	13.3	0.7	1.9	2	0	0	2	2	2	0	HEPN	domain
Rieske	PF00355.21	gi|15920948|ref|NP_376617.1|	-	2.3e-13	49.5	0.0	2.6e-13	49.3	0.0	1.1	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Rieske_2	PF13806.1	gi|15920948|ref|NP_376617.1|	-	2.8e-11	43.0	0.0	3.3e-11	42.8	0.0	1.1	1	0	0	1	1	1	1	Rieske-like	[2Fe-2S]	domain
PQQ_3	PF13570.1	gi|15920948|ref|NP_376617.1|	-	0.0016	18.6	0.0	0.0028	17.8	0.0	1.4	1	0	0	1	1	1	1	PQQ-like	domain
MFS_2	PF13347.1	gi|15920949|ref|NP_376618.1|	-	0.00011	20.7	9.2	0.00012	20.5	6.4	1.0	1	0	0	1	1	1	1	MFS/sugar	transport	protein
MFS_1	PF07690.11	gi|15920949|ref|NP_376618.1|	-	0.0022	16.7	14.0	0.0025	16.6	9.7	1.0	1	0	0	1	1	1	1	Major	Facilitator	Superfamily
FLILHELTA	PF10306.4	gi|15920949|ref|NP_376618.1|	-	0.11	12.6	0.5	0.18	11.8	0.4	1.5	1	0	0	1	1	1	0	Hypothetical	protein	FLILHELTA
PUCC	PF03209.10	gi|15920949|ref|NP_376618.1|	-	0.15	10.7	5.0	0.22	10.2	3.5	1.3	1	1	0	1	1	1	0	PUCC	protein
WND	PF07861.6	gi|15920949|ref|NP_376618.1|	-	1.4	7.8	5.9	0.11	11.4	1.1	1.4	2	0	0	2	2	2	0	WisP	family	N-Terminal	Region
TMCO5	PF14992.1	gi|15920949|ref|NP_376618.1|	-	3.3	6.7	4.7	13	4.7	3.2	1.8	1	1	0	1	1	1	0	TMCO5	family
DUF3487	PF11990.3	gi|15920949|ref|NP_376618.1|	-	9.1	5.7	7.1	3.2	7.1	0.1	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3487)
HTH_20	PF12840.2	gi|15920950|ref|NP_376619.1|	-	7.8e-09	35.2	0.0	1.5e-08	34.3	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|15920950|ref|NP_376619.1|	-	0.00029	20.4	0.1	0.00099	18.7	0.1	2.0	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_45	PF14947.1	gi|15920950|ref|NP_376619.1|	-	0.0011	18.6	0.4	0.0069	16.1	0.1	2.3	2	0	0	2	2	2	1	Winged	helix-turn-helix
DUF4097	PF13349.1	gi|15920950|ref|NP_376619.1|	-	0.0024	17.4	0.4	0.0024	17.4	0.3	3.4	3	1	0	3	3	3	1	Domain	of	unknown	function	(DUF4097)
DUF2154	PF09922.4	gi|15920950|ref|NP_376619.1|	-	0.011	15.4	5.6	0.065	12.9	0.0	3.3	3	1	1	4	4	4	0	Cell	wall-active	antibiotics	response	protein	(DUF2154)
HTH_12	PF08461.5	gi|15920950|ref|NP_376619.1|	-	0.074	12.7	0.0	0.22	11.2	0.0	1.8	2	0	0	2	2	2	0	Ribonuclease	R	winged-helix	domain
DUF4098	PF13345.1	gi|15920950|ref|NP_376619.1|	-	5.3	7.0	14.8	4.3	7.3	5.1	3.3	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF4098)
AhpC-TSA	PF00578.16	gi|15920951|ref|NP_376620.1|	-	1.3e-35	121.7	0.0	1.6e-35	121.4	0.0	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|15920951|ref|NP_376620.1|	-	2.8e-21	75.5	0.0	3.2e-21	75.4	0.0	1.0	1	0	0	1	1	1	1	Redoxin
DUF899	PF05988.7	gi|15920951|ref|NP_376620.1|	-	0.0023	17.3	0.0	0.0027	17.1	0.0	1.1	1	0	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF899)
AhpC-TSA_2	PF13911.1	gi|15920951|ref|NP_376620.1|	-	0.009	15.9	0.0	0.012	15.4	0.0	1.3	1	0	0	1	1	1	1	AhpC/TSA	antioxidant	enzyme
Thioredoxin_8	PF13905.1	gi|15920951|ref|NP_376620.1|	-	0.039	14.0	0.0	0.062	13.4	0.0	1.4	1	0	0	1	1	1	0	Thioredoxin-like
HTH_10	PF04967.7	gi|15920952|ref|NP_376621.1|	-	8.4e-21	73.3	0.4	1.7e-20	72.3	0.1	1.7	2	0	0	2	2	2	1	HTH	DNA	binding	domain
GerE	PF00196.14	gi|15920952|ref|NP_376621.1|	-	0.0085	15.3	0.1	0.025	13.8	0.1	1.8	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	luxR	family
Flavin_Reduct	PF01613.13	gi|15920953|ref|NP_376622.1|	-	2.2e-28	99.0	0.0	2.4e-28	98.9	0.0	1.0	1	0	0	1	1	1	1	Flavin	reductase	like	domain
DUF447	PF04289.7	gi|15920953|ref|NP_376622.1|	-	0.00049	19.7	0.0	0.00066	19.2	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF447)
Glyoxalase	PF00903.20	gi|15920954|ref|NP_376623.1|	-	2.4e-23	82.5	2.1	7.8e-11	42.0	0.0	2.1	2	0	0	2	2	2	2	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase_2	PF12681.2	gi|15920954|ref|NP_376623.1|	-	1.7e-13	51.1	1.8	5.5e-09	36.6	0.0	2.6	2	1	1	3	3	3	2	Glyoxalase-like	domain
Glyoxalase_4	PF13669.1	gi|15920954|ref|NP_376623.1|	-	5.7e-11	42.4	0.7	0.00021	21.2	0.2	3.5	2	2	1	3	3	3	2	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
HpaB_N	PF11794.3	gi|15920956|ref|NP_376625.1|	-	1.7e-80	270.2	0.0	2.5e-80	269.6	0.0	1.2	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
HpaB	PF03241.8	gi|15920956|ref|NP_376625.1|	-	1.1e-51	174.6	0.0	2.1e-51	173.6	0.0	1.5	2	0	0	2	2	2	1	4-hydroxyphenylacetate	3-hydroxylase	C	terminal
FAA_hydrolase	PF01557.13	gi|15920957|ref|NP_376626.1|	-	8.1e-33	113.7	0.0	1e-32	113.3	0.0	1.0	1	0	0	1	1	1	1	Fumarylacetoacetate	(FAA)	hydrolase	family
Phage_holin_3	PF05106.7	gi|15920957|ref|NP_376626.1|	-	0.031	14.2	0.0	0.056	13.4	0.0	1.4	1	0	0	1	1	1	0	Phage	holin	family	(Lysis	protein	S)
Na_H_Exchanger	PF00999.16	gi|15920958|ref|NP_376627.1|	-	3.1e-48	164.2	50.3	4e-48	163.8	34.8	1.0	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
AMP-binding	PF00501.23	gi|15920959|ref|NP_376628.1|	-	9e-90	301.0	0.0	1.1e-89	300.7	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|15920959|ref|NP_376628.1|	-	4.6e-22	78.7	0.8	9.4e-22	77.7	0.1	1.9	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
Grp1_Fun34_YaaH	PF01184.14	gi|15920960|ref|NP_376629.1|	-	1.6e-20	73.3	20.0	3e-20	72.4	13.9	1.4	1	1	0	1	1	1	1	GPR1/FUN34/yaaH	family
DUF308	PF03729.8	gi|15920960|ref|NP_376629.1|	-	1.3	9.0	17.1	3.2	7.8	4.4	2.3	1	1	1	2	2	2	0	Short	repeat	of	unknown	function	(DUF308)
DUF4282	PF14110.1	gi|15920960|ref|NP_376629.1|	-	3.1	8.0	10.9	2.7	8.2	0.2	2.4	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF4282)
SdpI	PF13630.1	gi|15920960|ref|NP_376629.1|	-	4.3	7.1	7.9	1.8	8.2	3.5	1.7	1	1	1	2	2	2	0	SdpI/YhfL	protein	family
TPP_enzyme_C	PF02775.16	gi|15920962|ref|NP_376631.1|	-	3.4e-23	81.9	0.0	7.1e-23	80.8	0.0	1.6	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
POR_N	PF01855.14	gi|15920962|ref|NP_376631.1|	-	6.4e-15	55.2	0.0	5.3e-14	52.2	0.0	2.0	2	0	0	2	2	2	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Fer4	PF00037.22	gi|15920962|ref|NP_376631.1|	-	9.1e-09	34.5	16.9	1.6e-07	30.6	4.9	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|15920962|ref|NP_376631.1|	-	1.1e-08	35.2	22.2	8.8e-06	26.0	8.5	2.4	2	1	2	4	4	3	3	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|15920962|ref|NP_376631.1|	-	1.8e-07	30.8	11.5	3.8e-07	29.8	8.0	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|15920962|ref|NP_376631.1|	-	4.1e-07	29.5	23.9	1.2e-05	24.9	3.9	2.7	3	0	0	3	3	2	2	4Fe-4S	binding	domain
TPP_enzyme_N	PF02776.13	gi|15920962|ref|NP_376631.1|	-	3.1e-06	26.7	0.2	0.0013	18.2	0.0	2.4	2	0	0	2	2	2	2	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
Fer4_2	PF12797.2	gi|15920962|ref|NP_376631.1|	-	3.8e-05	23.3	15.6	0.0031	17.3	3.1	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|15920962|ref|NP_376631.1|	-	6.5e-05	23.1	3.7	0.035	14.4	0.3	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|15920962|ref|NP_376631.1|	-	0.00011	22.4	12.7	0.00026	21.1	8.8	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|15920962|ref|NP_376631.1|	-	0.0003	21.4	5.0	0.0042	17.8	0.4	2.6	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.1	gi|15920962|ref|NP_376631.1|	-	0.001	18.8	12.1	0.066	13.0	1.7	2.4	1	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|15920962|ref|NP_376631.1|	-	0.017	15.6	6.8	0.017	15.6	4.7	3.2	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|15920962|ref|NP_376631.1|	-	0.041	13.9	11.2	0.39	10.7	1.6	2.4	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|15920962|ref|NP_376631.1|	-	0.48	11.0	15.0	0.11	13.1	1.4	3.2	2	1	1	3	3	3	0	4Fe-4S	single	cluster	domain
Fer4_4	PF12800.2	gi|15920962|ref|NP_376631.1|	-	1	9.8	19.6	0.042	14.1	2.1	2.7	3	0	0	3	3	2	0	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|15920962|ref|NP_376631.1|	-	1.2	9.6	12.9	0.94	9.9	3.0	2.6	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|15920962|ref|NP_376631.1|	-	3.6	8.0	14.7	8.9	6.7	2.9	2.8	1	1	1	2	2	2	0	4Fe-4S	single	cluster	domain
POR	PF01558.13	gi|15920963|ref|NP_376632.1|	-	1.5e-28	99.8	0.1	1.8e-28	99.5	0.0	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
Aminotran_3	PF00202.16	gi|15920964|ref|NP_376633.1|	-	2.5e-92	309.3	0.0	2.9e-92	309.1	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
RRM_1	PF00076.17	gi|15920966|ref|NP_376635.1|	-	0.014	15.0	0.1	0.02	14.5	0.1	1.3	1	0	0	1	1	1	0	RNA	recognition	motif.	(a.k.a.	RRM,	RBD,	or	RNP	domain)
Ald_Xan_dh_C2	PF02738.13	gi|15920967|ref|NP_376636.1|	-	3.9e-96	322.5	0.0	1.4e-77	261.3	0.0	2.1	1	1	1	2	2	2	2	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|15920967|ref|NP_376636.1|	-	9.3e-12	45.0	0.0	1.9e-11	43.9	0.0	1.6	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
SGS	PF05002.10	gi|15920967|ref|NP_376636.1|	-	0.024	14.3	0.0	0.054	13.2	0.0	1.5	1	0	0	1	1	1	0	SGS	domain
UPF0542	PF15086.1	gi|15920968|ref|NP_376637.1|	-	9.6	6.0	6.0	6.3	6.5	2.3	2.1	1	1	1	2	2	2	0	Uncharacterised	protein	family	UPF0542
PIN	PF01850.16	gi|15920969|ref|NP_376638.1|	-	2.8e-14	53.4	0.7	3.1e-14	53.3	0.5	1.0	1	0	0	1	1	1	1	PIN	domain
RFC1	PF08519.7	gi|15920969|ref|NP_376638.1|	-	0.19	11.4	0.8	0.23	11.2	0.5	1.1	1	0	0	1	1	1	0	Replication	factor	RFC1	C	terminal	domain
Antitoxin-MazE	PF04014.13	gi|15920970|ref|NP_376639.1|	-	1.5e-13	50.1	0.6	2.1e-13	49.6	0.4	1.3	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
Imm45	PF15603.1	gi|15920970|ref|NP_376639.1|	-	9.9e-05	22.4	2.1	0.00012	22.1	1.4	1.1	1	0	0	1	1	1	1	Immunity	protein	45
DUF104	PF01954.11	gi|15920970|ref|NP_376639.1|	-	0.0011	18.9	2.5	0.0019	18.1	1.7	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF104
DUF3647	PF12363.3	gi|15920970|ref|NP_376639.1|	-	0.019	15.0	0.2	0.046	13.8	0.1	1.6	2	0	0	2	2	2	0	Phage	protein
PmbA_TldD	PF01523.11	gi|15920970|ref|NP_376639.1|	-	0.038	13.2	0.0	0.042	13.1	0.0	1.0	1	0	0	1	1	1	0	Putative	modulator	of	DNA	gyrase
YjbR	PF04237.8	gi|15920970|ref|NP_376639.1|	-	0.046	14.0	0.0	0.051	13.9	0.0	1.2	1	0	0	1	1	1	0	YjbR
DUF1905	PF08922.6	gi|15920970|ref|NP_376639.1|	-	0.065	12.8	0.1	0.33	10.5	0.0	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1905)
DUF2853	PF11015.3	gi|15920970|ref|NP_376639.1|	-	0.074	13.5	0.1	0.17	12.3	0.0	1.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2853)
Cas_Csa5	PF09702.5	gi|15920970|ref|NP_376639.1|	-	0.082	12.9	1.3	0.53	10.4	0.9	1.9	1	1	0	1	1	1	0	CRISPR-associated	protein	(Cas_Csa5)
TIP49	PF06068.8	gi|15920970|ref|NP_376639.1|	-	0.1	11.3	1.1	0.13	10.9	0.8	1.1	1	0	0	1	1	1	0	TIP49	C-terminus
DUF488	PF04343.8	gi|15920971|ref|NP_376640.1|	-	3.4e-31	108.1	0.0	4.2e-31	107.8	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF488
Ribonuc_red_lgN	PF00317.16	gi|15920971|ref|NP_376640.1|	-	0.0045	16.7	0.0	0.009	15.7	0.0	1.5	1	0	0	1	1	1	1	Ribonucleotide	reductase,	all-alpha	domain
Phage_stabilise	PF11134.3	gi|15920971|ref|NP_376640.1|	-	0.074	11.6	0.1	0.092	11.3	0.0	1.2	1	0	0	1	1	1	0	Phage	stabilisation	protein
DUF59	PF01883.14	gi|15920972|ref|NP_376641.1|	-	1.4e-16	60.2	0.1	1.7e-16	59.9	0.1	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF59
DUF384	PF04064.8	gi|15920972|ref|NP_376641.1|	-	0.055	13.0	0.1	0.12	11.9	0.0	1.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF384)
CDI	PF02234.14	gi|15920972|ref|NP_376641.1|	-	0.11	12.2	0.0	0.22	11.3	0.0	1.4	1	0	0	1	1	1	0	Cyclin-dependent	kinase	inhibitor
VAR1	PF05316.7	gi|15920974|ref|NP_376643.1|	-	0.022	13.3	4.9	0.029	12.9	3.4	1.2	1	0	0	1	1	1	0	Mitochondrial	ribosomal	protein	(VAR1)
NTP_transf_2	PF01909.18	gi|15920976|ref|NP_376645.1|	-	1.7e-12	47.5	1.0	1.9e-12	47.3	0.7	1.1	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
DNA_pol_B_palm	PF14792.1	gi|15920976|ref|NP_376645.1|	-	0.13	12.3	0.0	0.18	11.8	0.0	1.3	1	1	0	1	1	1	0	DNA	polymerase	beta	palm
HEPN	PF05168.9	gi|15920977|ref|NP_376646.1|	-	1.8e-31	108.4	0.0	2.2e-31	108.1	0.0	1.1	1	0	0	1	1	1	1	HEPN	domain
DUF929	PF06053.6	gi|15920978|ref|NP_376647.1|	-	1.3e-76	257.0	11.7	1.5e-76	256.8	8.1	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF929)
TrmB	PF01978.14	gi|15920980|ref|NP_376649.1|	-	6.4e-15	54.6	0.6	8.9e-15	54.1	0.4	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.17	gi|15920980|ref|NP_376649.1|	-	4.1e-12	45.6	0.5	6.6e-12	44.9	0.3	1.2	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.2	gi|15920980|ref|NP_376649.1|	-	1.1e-11	44.2	0.0	1.6e-11	43.6	0.0	1.3	1	0	0	1	1	1	1	MarR	family
TFIIE_alpha	PF02002.12	gi|15920980|ref|NP_376649.1|	-	1.3e-09	37.4	2.3	1.6e-09	37.2	1.6	1.1	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HTH_27	PF13463.1	gi|15920980|ref|NP_376649.1|	-	1.1e-07	32.1	0.1	1.7e-07	31.4	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_11	PF08279.7	gi|15920980|ref|NP_376649.1|	-	2.4e-06	27.0	1.1	4.2e-06	26.3	0.8	1.3	1	0	0	1	1	1	1	HTH	domain
HTH_24	PF13412.1	gi|15920980|ref|NP_376649.1|	-	5.4e-06	25.7	0.5	5.4e-06	25.7	0.3	1.7	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
GntR	PF00392.16	gi|15920980|ref|NP_376649.1|	-	7.6e-06	25.2	0.1	1.7e-05	24.1	0.1	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HTH_34	PF13601.1	gi|15920980|ref|NP_376649.1|	-	2.4e-05	24.2	0.1	3.7e-05	23.6	0.1	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
Penicillinase_R	PF03965.11	gi|15920980|ref|NP_376649.1|	-	2.5e-05	24.3	0.1	3e-05	24.0	0.1	1.3	1	0	0	1	1	1	1	Penicillinase	repressor
Fe_dep_repress	PF01325.14	gi|15920980|ref|NP_376649.1|	-	3.9e-05	23.5	0.1	7.5e-05	22.5	0.1	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_DeoR	PF08220.7	gi|15920980|ref|NP_376649.1|	-	4.5e-05	22.8	0.2	7.4e-05	22.2	0.2	1.3	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
HTH_5	PF01022.15	gi|15920980|ref|NP_376649.1|	-	0.00011	21.8	0.3	0.00018	21.0	0.2	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|15920980|ref|NP_376649.1|	-	0.00012	21.7	0.1	0.00019	21.1	0.1	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_IclR	PF09339.5	gi|15920980|ref|NP_376649.1|	-	0.00084	18.8	0.0	0.0012	18.3	0.0	1.2	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
Rrf2	PF02082.15	gi|15920980|ref|NP_376649.1|	-	0.0012	18.9	0.2	0.0018	18.3	0.1	1.3	1	0	0	1	1	1	1	Transcriptional	regulator
DUF4423	PF14394.1	gi|15920980|ref|NP_376649.1|	-	0.0022	17.5	0.3	0.0033	16.9	0.2	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
z-alpha	PF02295.12	gi|15920980|ref|NP_376649.1|	-	0.0033	17.1	0.2	0.018	14.8	0.2	2.2	1	1	0	1	1	1	1	Adenosine	deaminase	z-alpha	domain
HTH_36	PF13730.1	gi|15920980|ref|NP_376649.1|	-	0.0043	17.1	0.1	0.0081	16.2	0.1	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_38	PF13936.1	gi|15920980|ref|NP_376649.1|	-	0.0044	16.5	1.7	0.0058	16.1	0.1	1.9	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_Mga	PF08280.6	gi|15920980|ref|NP_376649.1|	-	0.0046	16.6	0.5	0.011	15.5	0.4	1.5	1	0	0	1	1	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
GerE	PF00196.14	gi|15920980|ref|NP_376649.1|	-	0.005	16.1	0.1	0.0098	15.1	0.1	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	luxR	family
RPA_C	PF08784.6	gi|15920980|ref|NP_376649.1|	-	0.0052	17.1	0.1	0.01	16.2	0.0	1.5	1	1	0	1	1	1	1	Replication	protein	A	C	terminal
DUF2250	PF10007.4	gi|15920980|ref|NP_376649.1|	-	0.0073	16.1	1.3	0.011	15.6	0.9	1.4	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_29	PF13551.1	gi|15920980|ref|NP_376649.1|	-	0.014	15.5	0.0	0.021	14.9	0.0	1.2	1	0	0	1	1	1	0	Winged	helix-turn	helix
HxlR	PF01638.12	gi|15920980|ref|NP_376649.1|	-	0.019	14.5	0.2	0.03	13.9	0.2	1.3	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
HTH_Crp_2	PF13545.1	gi|15920980|ref|NP_376649.1|	-	0.021	14.6	0.0	0.031	14.0	0.0	1.3	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
FeoC	PF09012.5	gi|15920980|ref|NP_376649.1|	-	0.024	14.3	0.1	0.037	13.7	0.1	1.3	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
Mga	PF05043.8	gi|15920980|ref|NP_376649.1|	-	0.025	14.8	0.4	0.051	13.8	0.0	1.7	2	0	0	2	2	1	0	Mga	helix-turn-helix	domain
HTH_23	PF13384.1	gi|15920980|ref|NP_376649.1|	-	0.031	13.9	0.0	0.065	12.9	0.0	1.5	1	0	0	1	1	1	0	Homeodomain-like	domain
DUF387	PF04079.11	gi|15920980|ref|NP_376649.1|	-	0.037	13.3	0.1	0.047	13.0	0.0	1.2	1	0	0	1	1	1	0	Putative	transcriptional	regulators	(Ypuh-like)
EAP30	PF04157.11	gi|15920980|ref|NP_376649.1|	-	0.044	12.9	0.1	0.06	12.5	0.0	1.2	1	0	0	1	1	1	0	EAP30/Vps36	family
HTH_17	PF12728.2	gi|15920980|ref|NP_376649.1|	-	0.05	13.8	0.5	0.094	12.9	0.3	1.5	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_9	PF08221.6	gi|15920980|ref|NP_376649.1|	-	0.059	13.2	0.1	0.099	12.5	0.1	1.3	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
B-block_TFIIIC	PF04182.7	gi|15920980|ref|NP_376649.1|	-	0.061	13.1	0.0	0.08	12.8	0.0	1.3	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
HTH_6	PF01418.12	gi|15920980|ref|NP_376649.1|	-	0.062	13.0	0.0	0.1	12.3	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain,	rpiR	family
RTP	PF02334.11	gi|15920980|ref|NP_376649.1|	-	0.085	12.8	1.0	0.096	12.6	0.7	1.1	1	0	0	1	1	1	0	Replication	terminator	protein
Phage_pRha	PF09669.5	gi|15920980|ref|NP_376649.1|	-	0.089	13.1	1.3	0.2	12.0	0.9	1.6	1	1	1	2	2	2	0	Phage	regulatory	protein	Rha	(Phage_pRha)
Sigma70_r4_2	PF08281.7	gi|15920980|ref|NP_376649.1|	-	0.09	12.2	0.0	0.21	11.0	0.0	1.6	1	0	0	1	1	1	0	Sigma-70,	region	4
Trp_repressor	PF01371.14	gi|15920980|ref|NP_376649.1|	-	0.093	12.6	0.1	0.18	11.7	0.1	1.5	1	0	0	1	1	1	0	Trp	repressor	protein
Sigma70_ECF	PF07638.6	gi|15920980|ref|NP_376649.1|	-	0.11	12.1	0.3	0.36	10.4	0.1	1.7	1	1	1	2	2	2	0	ECF	sigma	factor
Cullin_Nedd8	PF10557.4	gi|15920980|ref|NP_376649.1|	-	0.16	11.8	0.2	0.16	11.8	0.1	2.0	2	1	0	2	2	2	0	Cullin	protein	neddylation	domain
BRCA2	PF00634.13	gi|15920980|ref|NP_376649.1|	-	0.71	9.2	2.9	0.71	9.2	0.7	1.9	2	0	0	2	2	2	0	BRCA2	repeat
HEPN	PF05168.9	gi|15920981|ref|NP_376650.1|	-	2.8e-26	91.7	3.6	3.2e-26	91.5	2.5	1.0	1	0	0	1	1	1	1	HEPN	domain
TPR_2	PF07719.12	gi|15920981|ref|NP_376650.1|	-	0.056	13.3	3.4	0.1	12.5	0.2	2.8	2	1	1	3	3	3	0	Tetratricopeptide	repeat
Glyco_transf_64	PF09258.5	gi|15920981|ref|NP_376650.1|	-	0.11	11.6	0.0	0.15	11.1	0.0	1.3	1	0	0	1	1	1	0	Glycosyl	transferase	family	64	domain
TPR_1	PF00515.23	gi|15920981|ref|NP_376650.1|	-	0.11	12.0	1.7	0.35	10.5	0.1	2.6	3	0	0	3	3	3	0	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|15920981|ref|NP_376650.1|	-	0.44	10.2	2.7	0.34	10.6	0.4	1.9	2	1	0	2	2	2	0	TPR	repeat
DUF3644	PF12358.3	gi|15920981|ref|NP_376650.1|	-	0.57	10.4	5.0	1.3	9.3	0.2	3.2	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3644)
TPR_8	PF13181.1	gi|15920981|ref|NP_376650.1|	-	1.5	8.8	5.7	13	5.8	0.0	3.9	3	1	1	4	4	4	0	Tetratricopeptide	repeat
NTP_transf_2	PF01909.18	gi|15920982|ref|NP_376651.1|	-	1.3e-07	31.8	0.5	2.7e-07	30.7	0.1	1.7	1	1	1	2	2	2	1	Nucleotidyltransferase	domain
RgpF	PF05045.7	gi|15920982|ref|NP_376651.1|	-	0.0095	14.5	0.1	0.0095	14.5	0.1	1.1	1	0	0	1	1	1	1	Rhamnan	synthesis	protein	F
DNA_photolyase	PF00875.13	gi|15920982|ref|NP_376651.1|	-	0.12	12.0	0.0	0.27	10.9	0.0	1.5	2	0	0	2	2	2	0	DNA	photolyase
TPP_enzyme_N	PF02776.13	gi|15920983|ref|NP_376652.1|	-	1.9e-47	160.9	0.0	1.7e-45	154.6	0.0	2.3	2	0	0	2	2	2	2	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|15920983|ref|NP_376652.1|	-	3.3e-34	117.6	0.1	2.1e-33	115.0	0.1	2.1	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.17	gi|15920983|ref|NP_376652.1|	-	1.2e-20	73.6	0.0	3.9e-20	72.0	0.0	1.9	1	1	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
CW_binding_2	PF04122.7	gi|15920983|ref|NP_376652.1|	-	0.00069	19.7	0.0	0.86	9.8	0.0	3.1	3	1	0	3	3	3	2	Putative	cell	wall	binding	repeat	2
Tyr-DNA_phospho	PF06087.7	gi|15920983|ref|NP_376652.1|	-	0.13	10.8	0.0	0.22	10.1	0.0	1.3	1	0	0	1	1	1	0	Tyrosyl-DNA	phosphodiesterase
RVT_3	PF13456.1	gi|15920984|ref|NP_376653.1|	-	2e-16	59.5	0.0	2.5e-16	59.2	0.0	1.1	1	0	0	1	1	1	1	Reverse	transcriptase-like
RNase_H	PF00075.19	gi|15920984|ref|NP_376653.1|	-	5.4e-08	33.2	0.0	6.2e-08	33.0	0.0	1.1	1	0	0	1	1	1	1	RNase	H
UPF0126	PF03458.8	gi|15920985|ref|NP_376654.1|	-	0.044	13.4	0.1	0.099	12.2	0.1	1.7	2	1	0	2	2	2	0	UPF0126	domain
ABC2_membrane	PF01061.19	gi|15920986|ref|NP_376655.1|	-	6.9e-11	41.7	31.6	6.9e-11	41.7	21.9	1.7	2	1	0	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.2	gi|15920986|ref|NP_376655.1|	-	0.039	12.9	39.1	0.054	12.5	26.9	1.3	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
ABC_tran	PF00005.22	gi|15920987|ref|NP_376656.1|	-	6.6e-10	39.4	0.0	1.9e-09	37.9	0.0	1.7	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|15920987|ref|NP_376656.1|	-	5.2e-08	33.1	0.0	8.3e-08	32.5	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
PadR	PF03551.9	gi|15920988|ref|NP_376657.1|	-	3.5e-18	65.1	0.0	6.3e-18	64.3	0.0	1.4	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
DUF4364	PF14277.1	gi|15920988|ref|NP_376657.1|	-	0.00018	21.1	1.7	0.00033	20.3	1.2	1.5	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
HTH_27	PF13463.1	gi|15920988|ref|NP_376657.1|	-	0.00018	21.7	0.0	0.00051	20.3	0.0	1.8	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_34	PF13601.1	gi|15920988|ref|NP_376657.1|	-	0.00022	21.2	0.1	0.00062	19.7	0.0	1.9	2	1	0	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_45	PF14947.1	gi|15920988|ref|NP_376657.1|	-	0.00054	19.7	0.3	0.0019	17.9	0.0	2.0	2	0	0	2	2	2	1	Winged	helix-turn-helix
TrmB	PF01978.14	gi|15920988|ref|NP_376657.1|	-	0.0026	17.4	2.1	0.011	15.3	0.4	2.4	2	1	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
DUF505	PF04458.7	gi|15920988|ref|NP_376657.1|	-	0.0085	14.2	0.1	0.011	13.9	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF505)
FUR	PF01475.14	gi|15920988|ref|NP_376657.1|	-	0.01	15.7	0.0	0.023	14.6	0.0	1.5	1	1	0	1	1	1	0	Ferric	uptake	regulator	family
HTH_5	PF01022.15	gi|15920988|ref|NP_376657.1|	-	0.018	14.7	0.0	0.48	10.1	0.0	2.7	2	1	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
DUF1495	PF07381.6	gi|15920988|ref|NP_376657.1|	-	0.025	14.2	0.1	0.064	12.9	0.0	1.6	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain	(DUF1495)
Cullin_Nedd8	PF10557.4	gi|15920988|ref|NP_376657.1|	-	0.055	13.2	0.0	0.29	10.9	0.0	2.0	1	1	1	2	2	2	0	Cullin	protein	neddylation	domain
HTH_24	PF13412.1	gi|15920988|ref|NP_376657.1|	-	0.059	12.7	0.1	19	4.7	0.0	3.0	3	0	0	3	3	3	0	Winged	helix-turn-helix	DNA-binding
HTH_42	PF06224.7	gi|15920988|ref|NP_376657.1|	-	0.073	12.3	0.0	0.073	12.3	0.0	1.0	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
AphA_like	PF14557.1	gi|15920988|ref|NP_376657.1|	-	0.099	12.1	0.0	0.11	12.0	0.0	1.2	1	0	0	1	1	1	0	Putative	AphA-like	transcriptional	regulator
Mrr_N	PF14338.1	gi|15920988|ref|NP_376657.1|	-	0.13	12.3	0.5	3.3	7.8	0.0	2.7	3	0	0	3	3	3	0	Mrr	N-terminal	domain
HxlR	PF01638.12	gi|15920989|ref|NP_376658.1|	-	1.9e-23	81.8	0.1	2.3e-23	81.6	0.1	1.1	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_5	PF01022.15	gi|15920989|ref|NP_376658.1|	-	8.5e-08	31.7	0.0	1.3e-07	31.1	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|15920989|ref|NP_376658.1|	-	3.9e-06	26.5	0.0	5.7e-06	26.0	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_34	PF13601.1	gi|15920989|ref|NP_376658.1|	-	9.7e-05	22.3	0.2	0.00012	22.0	0.1	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_45	PF14947.1	gi|15920989|ref|NP_376658.1|	-	0.00014	21.6	0.2	0.0002	21.1	0.1	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_24	PF13412.1	gi|15920989|ref|NP_376658.1|	-	0.0003	20.1	0.1	0.00047	19.4	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_27	PF13463.1	gi|15920989|ref|NP_376658.1|	-	0.00044	20.5	0.0	0.00073	19.8	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
PadR	PF03551.9	gi|15920989|ref|NP_376658.1|	-	0.00076	19.2	0.1	0.0011	18.6	0.0	1.2	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
RepL	PF05732.6	gi|15920989|ref|NP_376658.1|	-	0.0015	17.7	0.2	0.0025	17.0	0.2	1.5	1	1	0	1	1	1	1	Firmicute	plasmid	replication	protein	(RepL)
MarR	PF01047.17	gi|15920989|ref|NP_376658.1|	-	0.0029	17.2	0.1	0.004	16.8	0.0	1.3	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.2	gi|15920989|ref|NP_376658.1|	-	0.0033	17.0	0.0	0.0051	16.4	0.0	1.2	1	0	0	1	1	1	1	MarR	family
HTH_12	PF08461.5	gi|15920989|ref|NP_376658.1|	-	0.012	15.2	0.1	0.023	14.3	0.1	1.4	1	0	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
HTH_36	PF13730.1	gi|15920989|ref|NP_376658.1|	-	0.012	15.6	0.1	0.022	14.8	0.1	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
TrmB	PF01978.14	gi|15920989|ref|NP_376658.1|	-	0.014	15.1	0.1	0.018	14.7	0.0	1.3	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
DUF505	PF04458.7	gi|15920989|ref|NP_376658.1|	-	0.024	12.8	0.2	0.024	12.7	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF505)
FUR	PF01475.14	gi|15920989|ref|NP_376658.1|	-	0.03	14.2	0.1	0.04	13.8	0.0	1.2	1	0	0	1	1	1	0	Ferric	uptake	regulator	family
HTH_11	PF08279.7	gi|15920989|ref|NP_376658.1|	-	0.039	13.6	0.0	0.065	12.8	0.0	1.4	1	0	0	1	1	1	0	HTH	domain
Sulfolobus_pRN	PF05584.6	gi|15920989|ref|NP_376658.1|	-	0.053	13.5	0.1	0.077	12.9	0.1	1.4	1	1	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
DUF2250	PF10007.4	gi|15920989|ref|NP_376658.1|	-	0.12	12.3	0.1	0.32	10.9	0.1	1.8	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
SSF	PF00474.12	gi|15920990|ref|NP_376659.1|	-	8.3e-11	41.1	28.9	8.3e-11	41.1	20.0	1.7	2	0	0	2	2	2	1	Sodium:solute	symporter	family
DUF3311	PF11755.3	gi|15920991|ref|NP_376660.1|	-	1.7e-16	59.5	2.3	1.9e-16	59.3	1.6	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3311)
DUF3995	PF13160.1	gi|15920991|ref|NP_376660.1|	-	0.048	13.7	0.3	0.05	13.6	0.2	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3995)
DUF4231	PF14015.1	gi|15920991|ref|NP_376660.1|	-	0.05	13.5	1.3	0.059	13.3	0.9	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4231)
DUF3902	PF13042.1	gi|15920991|ref|NP_376660.1|	-	0.12	11.7	8.6	0.49	9.6	6.0	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3902)
DUF1628	PF07790.6	gi|15920991|ref|NP_376660.1|	-	0.12	13.1	0.1	0.12	13.1	0.1	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1628)
ABC2_membrane_3	PF12698.2	gi|15920991|ref|NP_376660.1|	-	0.19	10.7	2.7	0.22	10.5	1.9	1.0	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
FeoB_C	PF07664.7	gi|15920991|ref|NP_376660.1|	-	1.6	8.1	5.4	14	5.2	1.7	2.1	2	0	0	2	2	2	0	Ferrous	iron	transport	protein	B	C	terminus
DUF1129	PF06570.6	gi|15920991|ref|NP_376660.1|	-	2.4	7.4	5.0	1.2	8.4	1.0	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1129)
DUF4064	PF13273.1	gi|15920991|ref|NP_376660.1|	-	4.7	7.3	6.1	14	5.8	3.3	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4064)
DUF805	PF05656.9	gi|15920991|ref|NP_376660.1|	-	5.8	6.7	5.9	7.4	6.4	4.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF805)
LSM	PF01423.17	gi|15920992|ref|NP_376661.1|	-	1.2e-22	79.1	0.6	1.4e-22	78.9	0.4	1.0	1	0	0	1	1	1	1	LSM	domain
SM-ATX	PF14438.1	gi|15920992|ref|NP_376661.1|	-	0.00088	19.1	0.2	0.0012	18.6	0.1	1.2	1	0	0	1	1	1	1	Ataxin	2	SM	domain
NADH-u_ox-rdase	PF10785.4	gi|15920993|ref|NP_376662.1|	-	6.9	6.9	7.6	0.89	9.8	0.2	2.8	2	1	1	3	3	3	0	NADH-ubiquinone	oxidoreductase	complex	I,	21	kDa	subunit
DUF87	PF01935.12	gi|15920996|ref|NP_376665.1|	-	3.1e-44	151.4	0.3	5e-44	150.8	0.2	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF87
AAA_10	PF12846.2	gi|15920996|ref|NP_376665.1|	-	9.9e-12	44.9	0.1	4.2e-11	42.8	0.1	1.9	1	1	0	1	1	1	1	AAA-like	domain
FtsK_SpoIIIE	PF01580.13	gi|15920996|ref|NP_376665.1|	-	4e-05	23.1	0.0	0.00028	20.4	0.0	2.0	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
TrwB_AAD_bind	PF10412.4	gi|15920996|ref|NP_376665.1|	-	0.016	13.8	0.0	0.047	12.3	0.0	1.7	2	0	0	2	2	2	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA_22	PF13401.1	gi|15920996|ref|NP_376665.1|	-	0.046	13.8	0.0	0.26	11.4	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
ABC_tran	PF00005.22	gi|15920996|ref|NP_376665.1|	-	0.1	12.9	0.0	0.19	12.0	0.0	1.4	1	0	0	1	1	1	0	ABC	transporter
Zot	PF05707.7	gi|15920996|ref|NP_376665.1|	-	0.1	12.0	0.0	0.43	10.0	0.0	1.9	2	0	0	2	2	2	0	Zonular	occludens	toxin	(Zot)
DNA_repr_REX1B	PF14966.1	gi|15920997|ref|NP_376666.1|	-	0.53	10.6	7.2	11	6.5	0.4	3.9	3	0	0	3	3	3	0	DNA	repair	REX1-B
Dabb	PF07876.7	gi|15920998|ref|NP_376667.1|	-	0.14	12.6	0.3	0.47	10.9	0.2	1.9	1	0	0	1	1	1	0	Stress	responsive	A/B	Barrel	Domain
NPV_P10	PF05531.7	gi|15920998|ref|NP_376667.1|	-	0.29	11.3	9.1	0.21	11.8	0.4	3.1	1	1	2	3	3	3	0	Nucleopolyhedrovirus	P10	protein
Rsd_AlgQ	PF04353.8	gi|15920998|ref|NP_376667.1|	-	0.3	10.7	7.2	0.17	11.5	2.3	2.2	1	1	1	2	2	2	0	Regulator	of	RNA	polymerase	sigma(70)	subunit,	Rsd/AlgQ
Ribosomal_S20p	PF01649.13	gi|15920998|ref|NP_376667.1|	-	0.35	11.2	0.0	0.35	11.2	0.0	3.6	1	1	2	3	3	3	0	Ribosomal	protein	S20
IF-2B	PF01008.12	gi|15920998|ref|NP_376667.1|	-	0.37	9.7	4.8	0.66	8.9	3.3	1.5	1	0	0	1	1	1	0	Initiation	factor	2	subunit	family
Bacillus_HBL	PF05791.6	gi|15920998|ref|NP_376667.1|	-	0.66	9.3	16.3	0.86	8.9	2.3	2.5	1	1	1	2	2	2	0	Bacillus	haemolytic	enterotoxin	(HBL)
DUF3810	PF12725.2	gi|15920998|ref|NP_376667.1|	-	2.9	6.6	7.5	2.4	6.9	1.4	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3810)
SlyX	PF04102.7	gi|15920998|ref|NP_376667.1|	-	5.4	7.4	8.6	7.9	6.9	0.3	3.4	3	1	0	3	3	3	0	SlyX
NurA	PF09376.5	gi|15920999|ref|NP_376668.1|	-	1.4e-26	93.4	2.6	2e-26	92.9	1.8	1.2	1	0	0	1	1	1	1	NurA	domain
HTH_45	PF14947.1	gi|15921000|ref|NP_376669.1|	-	7.7e-21	73.7	6.1	1.3e-20	72.9	4.2	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix
DUF3116	PF11313.3	gi|15921000|ref|NP_376669.1|	-	1e-06	28.2	2.3	1.9e-05	24.2	1.6	2.3	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF3116)
DUF4364	PF14277.1	gi|15921000|ref|NP_376669.1|	-	4.1e-06	26.4	3.3	4.5e-06	26.3	2.3	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
HTH_34	PF13601.1	gi|15921000|ref|NP_376669.1|	-	2.6e-05	24.1	1.0	3.5e-05	23.7	0.5	1.5	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
PadR	PF03551.9	gi|15921000|ref|NP_376669.1|	-	0.0012	18.5	1.1	0.0012	18.5	0.8	1.9	2	0	0	2	2	2	1	Transcriptional	regulator	PadR-like	family
Put_DNA-bind_N	PF06971.8	gi|15921000|ref|NP_376669.1|	-	0.0013	18.4	1.3	0.025	14.3	0.1	2.4	2	0	0	2	2	2	1	Putative	DNA-binding	protein	N-terminus
HTH_27	PF13463.1	gi|15921000|ref|NP_376669.1|	-	0.0026	18.0	1.8	0.0035	17.6	0.1	2.0	2	1	0	2	2	2	1	Winged	helix	DNA-binding	domain
HxlR	PF01638.12	gi|15921000|ref|NP_376669.1|	-	0.0029	17.1	0.2	0.0038	16.8	0.1	1.4	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
Mrr_N	PF14338.1	gi|15921000|ref|NP_376669.1|	-	0.0061	16.6	0.6	0.013	15.6	0.1	1.8	1	1	1	2	2	2	1	Mrr	N-terminal	domain
FaeA	PF04703.7	gi|15921000|ref|NP_376669.1|	-	0.0092	16.1	0.2	0.0092	16.1	0.1	1.7	2	0	0	2	2	2	1	FaeA-like	protein
Ribosomal_S19e	PF01090.14	gi|15921000|ref|NP_376669.1|	-	0.036	13.4	0.1	0.055	12.9	0.1	1.4	1	1	0	1	1	1	0	Ribosomal	protein	S19e
PaaX	PF07848.7	gi|15921000|ref|NP_376669.1|	-	0.064	13.2	0.1	0.2	11.6	0.0	2.0	2	0	0	2	2	2	0	PaaX-like	protein
TrmB	PF01978.14	gi|15921000|ref|NP_376669.1|	-	0.094	12.4	1.9	0.12	12.0	0.3	1.9	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_5	PF01022.15	gi|15921000|ref|NP_376669.1|	-	0.18	11.5	1.8	3.7	7.2	0.1	2.7	2	1	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.1	gi|15921000|ref|NP_376669.1|	-	0.34	10.3	4.5	0.36	10.2	0.4	2.5	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
DUF4423	PF14394.1	gi|15921000|ref|NP_376669.1|	-	0.43	10.1	5.5	6.1	6.3	0.0	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4423)
Ferritin	PF00210.19	gi|15921002|ref|NP_376671.1|	-	0.0015	18.3	0.4	0.0029	17.3	0.2	1.4	1	0	0	1	1	1	1	Ferritin-like	domain
DUF3263	PF11662.3	gi|15921002|ref|NP_376671.1|	-	0.0049	16.2	0.1	0.015	14.7	0.1	1.8	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF3263)
tRNA-synt_2b	PF00587.20	gi|15921002|ref|NP_376671.1|	-	0.0099	15.4	0.0	0.02	14.4	0.0	1.5	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
DUF2004	PF09406.5	gi|15921002|ref|NP_376671.1|	-	0.024	14.6	0.3	0.058	13.4	0.2	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2004)
CbiA	PF01656.18	gi|15921003|ref|NP_376672.1|	-	2e-12	46.9	0.0	7e-12	45.1	0.0	1.7	2	0	0	2	2	2	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.1	gi|15921003|ref|NP_376672.1|	-	2.8e-08	33.8	0.1	6e-08	32.7	0.1	1.5	1	1	0	1	1	1	1	AAA	domain
ArsA_ATPase	PF02374.10	gi|15921003|ref|NP_376672.1|	-	4.7e-07	29.1	1.4	9.8e-06	24.8	0.9	2.3	1	1	0	1	1	1	1	Anion-transporting	ATPase
MipZ	PF09140.6	gi|15921003|ref|NP_376672.1|	-	1.7e-05	24.0	0.1	3e-05	23.2	0.0	1.6	1	1	0	1	1	1	1	ATPase	MipZ
Fer4_NifH	PF00142.13	gi|15921003|ref|NP_376672.1|	-	0.00031	20.0	0.0	0.00064	18.9	0.0	1.7	2	0	0	2	2	2	1	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
AAA_17	PF13207.1	gi|15921003|ref|NP_376672.1|	-	0.0019	19.0	0.1	0.015	16.0	0.1	2.4	1	1	0	1	1	1	1	AAA	domain
YhjQ	PF06564.7	gi|15921003|ref|NP_376672.1|	-	0.007	15.7	0.0	0.017	14.4	0.0	1.6	2	0	0	2	2	2	1	YhjQ	protein
VirC1	PF07015.6	gi|15921003|ref|NP_376672.1|	-	0.015	14.3	0.0	0.028	13.5	0.0	1.4	1	0	0	1	1	1	0	VirC1	protein
MobB	PF03205.9	gi|15921003|ref|NP_376672.1|	-	0.039	13.6	0.0	0.063	12.9	0.0	1.4	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
IstB_IS21	PF01695.12	gi|15921003|ref|NP_376672.1|	-	0.081	12.3	0.0	0.14	11.6	0.0	1.3	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
KTI12	PF08433.5	gi|15921003|ref|NP_376672.1|	-	0.1	11.8	0.0	0.16	11.1	0.0	1.2	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
AAA_10	PF12846.2	gi|15921003|ref|NP_376672.1|	-	0.11	11.9	0.0	0.14	11.5	0.0	1.3	1	0	0	1	1	1	0	AAA-like	domain
APS_kinase	PF01583.15	gi|15921003|ref|NP_376672.1|	-	0.11	12.1	0.1	0.35	10.5	0.0	1.9	2	0	0	2	2	2	0	Adenylylsulphate	kinase
AAA_26	PF13500.1	gi|15921003|ref|NP_376672.1|	-	0.16	11.5	0.2	0.59	9.7	0.1	1.8	2	0	0	2	2	2	0	AAA	domain
CBS	PF00571.23	gi|15921004|ref|NP_376673.1|	-	1.1e-52	175.5	9.5	3e-14	52.5	0.1	4.1	4	0	0	4	4	4	4	CBS	domain
DisA_N	PF02457.11	gi|15921004|ref|NP_376673.1|	-	0.075	12.1	0.9	13	4.9	0.0	3.0	2	1	1	3	3	3	0	DisA	bacterial	checkpoint	controller	nucleotide-binding
DUF2972	PF11186.3	gi|15921004|ref|NP_376673.1|	-	0.13	12.1	0.2	0.4	10.5	0.0	1.8	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2972)
LigB	PF02900.13	gi|15921005|ref|NP_376674.1|	-	5.8e-64	215.6	0.0	6.5e-64	215.5	0.0	1.0	1	0	0	1	1	1	1	Catalytic	LigB	subunit	of	aromatic	ring-opening	dioxygenase
PadR	PF03551.9	gi|15921006|ref|NP_376675.1|	-	2.4e-05	24.0	0.2	3.5e-05	23.4	0.1	1.2	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
TrmB	PF01978.14	gi|15921006|ref|NP_376675.1|	-	0.00086	18.9	0.1	0.0014	18.3	0.1	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
FUR	PF01475.14	gi|15921006|ref|NP_376675.1|	-	0.022	14.6	0.0	0.031	14.2	0.0	1.2	1	0	0	1	1	1	0	Ferric	uptake	regulator	family
Phage_pRha	PF09669.5	gi|15921006|ref|NP_376675.1|	-	0.03	14.6	0.1	0.049	13.9	0.0	1.3	1	0	0	1	1	1	0	Phage	regulatory	protein	Rha	(Phage_pRha)
PaaX	PF07848.7	gi|15921006|ref|NP_376675.1|	-	0.032	14.2	0.0	0.059	13.3	0.0	1.4	1	0	0	1	1	1	0	PaaX-like	protein
UcrQ	PF02939.11	gi|15921006|ref|NP_376675.1|	-	0.082	12.7	0.1	1.3	8.8	0.1	2.2	1	1	1	2	2	2	0	UcrQ	family
Glyco_hydro_1	PF00232.13	gi|15921007|ref|NP_376676.1|	-	1.5e-50	171.7	0.4	3e-26	91.6	0.0	2.2	1	1	1	2	2	2	2	Glycosyl	hydrolase	family	1
Methyltransf_11	PF08241.7	gi|15921009|ref|NP_376678.1|	-	2.7e-19	69.4	0.0	3.8e-19	68.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|15921009|ref|NP_376678.1|	-	2.4e-14	53.2	0.0	2.9e-14	52.9	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|15921009|ref|NP_376678.1|	-	4.3e-11	42.8	0.0	5.2e-11	42.5	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|15921009|ref|NP_376678.1|	-	1.1e-10	41.8	0.0	1.6e-10	41.3	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|15921009|ref|NP_376678.1|	-	1.4e-07	32.0	0.0	2.2e-07	31.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|15921009|ref|NP_376678.1|	-	7.2e-07	29.5	0.0	1.1e-06	28.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|15921009|ref|NP_376678.1|	-	9.4e-07	28.8	0.0	1.3e-06	28.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|15921009|ref|NP_376678.1|	-	1.3e-06	27.6	0.0	1.6e-06	27.3	0.0	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
MTS	PF05175.9	gi|15921009|ref|NP_376678.1|	-	8.7e-06	25.2	0.0	1.2e-05	24.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_8	PF05148.10	gi|15921009|ref|NP_376678.1|	-	2e-05	24.3	0.0	2.9e-05	23.8	0.0	1.3	1	1	0	1	1	1	1	Hypothetical	methyltransferase
NodS	PF05401.6	gi|15921009|ref|NP_376678.1|	-	0.0055	16.1	0.0	0.007	15.7	0.0	1.1	1	0	0	1	1	1	1	Nodulation	protein	S	(NodS)
MetW	PF07021.7	gi|15921009|ref|NP_376678.1|	-	0.1	11.9	0.0	0.17	11.2	0.0	1.3	1	1	0	1	1	1	0	Methionine	biosynthesis	protein	MetW
DUF72	PF01904.13	gi|15921010|ref|NP_376679.1|	-	1.6e-42	145.8	0.1	1.8e-42	145.6	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF72
Tobravirus_2B	PF05271.6	gi|15921010|ref|NP_376679.1|	-	0.022	14.4	0.1	0.073	12.7	0.0	1.9	2	0	0	2	2	2	0	Tobravirus	2B	protein
PaREP1	PF05942.6	gi|15921011|ref|NP_376680.1|	-	4.3e-12	45.9	0.0	8.3e-12	44.9	0.0	1.4	2	0	0	2	2	2	1	Archaeal	PaREP1/PaREP8	family
HEPN	PF05168.9	gi|15921011|ref|NP_376680.1|	-	0.066	13.0	0.2	0.098	12.5	0.1	1.3	1	0	0	1	1	1	0	HEPN	domain
Pkinase	PF00069.20	gi|15921012|ref|NP_376681.1|	-	5.7e-30	104.3	0.0	1e-29	103.4	0.0	1.4	1	0	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|15921012|ref|NP_376681.1|	-	4.2e-10	39.1	0.0	1.4e-09	37.4	0.0	1.9	1	1	0	1	1	1	1	Protein	tyrosine	kinase
Cas_Csa5	PF09702.5	gi|15921012|ref|NP_376681.1|	-	0.018	15.0	0.3	0.065	13.3	0.0	2.1	3	0	0	3	3	3	0	CRISPR-associated	protein	(Cas_Csa5)
COX7a	PF02238.10	gi|15921012|ref|NP_376681.1|	-	0.22	11.2	0.8	8.2	6.2	0.1	3.2	3	0	0	3	3	3	0	Cytochrome	c	oxidase	subunit	VIIa
Peptidase_S9	PF00326.16	gi|15921013|ref|NP_376682.1|	-	1.3e-47	161.8	0.1	1.8e-47	161.3	0.0	1.2	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
Abhydrolase_5	PF12695.2	gi|15921013|ref|NP_376682.1|	-	8.9e-11	41.7	0.0	1.4e-10	41.0	0.0	1.3	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_6	PF12697.2	gi|15921013|ref|NP_376682.1|	-	5.9e-07	29.6	0.0	9.9e-06	25.5	0.0	2.1	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Peptidase_S15	PF02129.13	gi|15921013|ref|NP_376682.1|	-	6.2e-07	29.1	0.4	0.0007	19.1	0.5	2.2	1	1	1	2	2	2	2	X-Pro	dipeptidyl-peptidase	(S15	family)
DLH	PF01738.13	gi|15921013|ref|NP_376682.1|	-	2.7e-06	26.8	0.0	3.4e-05	23.2	0.0	2.1	2	0	0	2	2	2	1	Dienelactone	hydrolase	family
DPPIV_N	PF00930.16	gi|15921013|ref|NP_376682.1|	-	3.4e-06	25.8	0.2	0.00098	17.7	0.0	3.0	3	0	0	3	3	3	1	Dipeptidyl	peptidase	IV	(DPP	IV)	N-terminal	region
Abhydrolase_2	PF02230.11	gi|15921013|ref|NP_376682.1|	-	0.022	14.2	0.1	0.069	12.5	0.0	1.7	2	0	0	2	2	2	0	Phospholipase/Carboxylesterase
FSH1	PF03959.8	gi|15921013|ref|NP_376682.1|	-	0.032	13.6	0.0	0.063	12.7	0.0	1.4	1	0	0	1	1	1	0	Serine	hydrolase	(FSH1)
Abhydrolase_4	PF08386.5	gi|15921013|ref|NP_376682.1|	-	0.061	13.2	0.0	0.15	11.9	0.0	1.5	1	0	0	1	1	1	0	TAP-like	protein
MFS_1	PF07690.11	gi|15921014|ref|NP_376683.1|	-	3.1e-21	75.4	52.9	3.8e-15	55.4	25.1	2.2	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
PIN	PF01850.16	gi|15921016|ref|NP_376685.1|	-	2.3e-15	56.9	0.0	2.7e-15	56.7	0.0	1.1	1	0	0	1	1	1	1	PIN	domain
DUF2024	PF09630.5	gi|15921016|ref|NP_376685.1|	-	0.026	14.2	0.1	0.04	13.6	0.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF2024)
AMP-binding	PF00501.23	gi|15921017|ref|NP_376686.1|	-	1.8e-82	276.9	0.1	2.2e-82	276.6	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|15921017|ref|NP_376686.1|	-	5.5e-21	75.2	1.4	1.4e-20	74.0	1.0	1.7	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
DUF3354	PF11834.3	gi|15921017|ref|NP_376686.1|	-	0.02	14.5	0.1	0.35	10.4	0.0	2.9	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF3354)
Molydop_binding	PF01568.16	gi|15921017|ref|NP_376686.1|	-	0.11	12.2	2.1	3.8	7.3	0.0	3.1	2	1	0	2	2	2	0	Molydopterin	dinucleotide	binding	domain
MFS_1	PF07690.11	gi|15921018|ref|NP_376687.1|	-	1.4e-06	27.3	57.4	0.014	14.1	11.9	3.7	1	1	2	3	3	3	3	Major	Facilitator	Superfamily
NTP_transf_2	PF01909.18	gi|15921019|ref|NP_376688.1|	-	2.3e-07	31.0	0.3	3.5e-07	30.4	0.2	1.2	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
DUF86	PF01934.12	gi|15921020|ref|NP_376689.1|	-	1.4e-18	66.6	0.4	1.6e-18	66.4	0.3	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF86
NTase_sub_bind	PF08780.6	gi|15921020|ref|NP_376689.1|	-	0.0032	17.2	0.2	0.004	16.9	0.1	1.2	1	0	0	1	1	1	1	Nucleotidyltransferase	substrate	binding	protein	like
DUF4145	PF13643.1	gi|15921020|ref|NP_376689.1|	-	0.0061	16.3	0.1	0.015	15.0	0.0	1.6	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4145)
Bac_small_YrzI	PF09501.5	gi|15921023|ref|NP_376692.1|	-	0.019	14.8	0.6	0.041	13.7	0.4	1.5	1	0	0	1	1	1	0	Probable	sporulation	protein	(Bac_small_yrzI)
NTP_transf_2	PF01909.18	gi|15921024|ref|NP_376693.1|	-	9.5e-14	51.4	0.8	1.4e-13	50.9	0.5	1.3	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
DNA_pol_B_palm	PF14792.1	gi|15921024|ref|NP_376693.1|	-	0.00035	20.6	0.0	0.00043	20.3	0.0	1.1	1	0	0	1	1	1	1	DNA	polymerase	beta	palm
Anticodon_1	PF08264.8	gi|15921024|ref|NP_376693.1|	-	0.013	15.3	1.4	0.013	15.3	0.9	1.8	2	0	0	2	2	2	0	Anticodon-binding	domain	of	tRNA
HEPN	PF05168.9	gi|15921025|ref|NP_376694.1|	-	1.4e-19	70.1	0.1	1.6e-19	69.8	0.0	1.1	1	0	0	1	1	1	1	HEPN	domain
Phe_hydrox_dim	PF07976.7	gi|15921025|ref|NP_376694.1|	-	0.08	12.5	0.0	0.096	12.2	0.0	1.1	1	0	0	1	1	1	0	Phenol	hydroxylase,	C-terminal	dimerisation	domain
HEPN	PF05168.9	gi|15921026|ref|NP_376695.1|	-	2.2e-26	92.0	1.3	2.6e-26	91.8	0.9	1.0	1	0	0	1	1	1	1	HEPN	domain
TPR_11	PF13414.1	gi|15921026|ref|NP_376695.1|	-	0.0047	16.5	1.2	0.0076	15.8	0.3	1.7	2	0	0	2	2	2	1	TPR	repeat
TPR_12	PF13424.1	gi|15921026|ref|NP_376695.1|	-	0.025	14.4	1.2	0.062	13.2	0.3	2.0	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|15921026|ref|NP_376695.1|	-	0.027	15.1	1.0	0.044	14.4	0.1	1.7	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|15921026|ref|NP_376695.1|	-	0.072	13.0	1.0	0.072	13.0	0.7	2.2	2	0	0	2	2	2	0	Tetratricopeptide	repeat
MIT	PF04212.13	gi|15921026|ref|NP_376695.1|	-	0.82	9.6	3.2	18	5.2	0.0	2.6	3	0	0	3	3	3	0	MIT	(microtubule	interacting	and	transport)	domain
TPR_19	PF14559.1	gi|15921026|ref|NP_376695.1|	-	1.6	9.1	5.1	0.52	10.6	0.3	2.4	3	1	0	3	3	3	0	Tetratricopeptide	repeat
NTP_transf_2	PF01909.18	gi|15921027|ref|NP_376696.1|	-	1.8e-12	47.3	0.7	1.8e-12	47.3	0.5	1.6	2	0	0	2	2	2	1	Nucleotidyltransferase	domain
DNA_pol_B_palm	PF14792.1	gi|15921027|ref|NP_376696.1|	-	0.0033	17.4	0.1	0.0044	17.0	0.1	1.2	1	0	0	1	1	1	1	DNA	polymerase	beta	palm
DUF294	PF03445.8	gi|15921027|ref|NP_376696.1|	-	0.022	14.3	0.0	0.03	13.9	0.0	1.3	1	0	0	1	1	1	0	Putative	nucleotidyltransferase	DUF294
DCP1	PF06058.8	gi|15921027|ref|NP_376696.1|	-	0.079	13.0	0.9	0.15	12.1	0.6	1.7	1	1	0	1	1	1	0	Dcp1-like	decapping	family
HEPN	PF05168.9	gi|15921028|ref|NP_376697.1|	-	6.9e-28	96.9	4.7	1.2e-27	96.0	3.2	1.3	1	1	0	1	1	1	1	HEPN	domain
PaREP1	PF05942.6	gi|15921028|ref|NP_376697.1|	-	0.0046	16.7	0.3	0.0065	16.3	0.2	1.4	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
HJURP_C	PF12347.3	gi|15921028|ref|NP_376697.1|	-	0.049	13.2	0.3	0.081	12.5	0.2	1.2	1	0	0	1	1	1	0	Holliday	junction	regulator	protein	family	C-terminal	repeat
UXS1_N	PF11803.3	gi|15921028|ref|NP_376697.1|	-	0.073	12.8	0.1	0.13	12.0	0.0	1.4	1	0	0	1	1	1	0	UDP-glucuronate	decarboxylase	N-terminal
FlaF	PF07309.6	gi|15921028|ref|NP_376697.1|	-	0.076	12.8	0.1	0.14	12.0	0.0	1.4	1	0	0	1	1	1	0	Flagellar	protein	FlaF
PaREP1	PF05942.6	gi|15921029|ref|NP_376698.1|	-	1.4e-25	89.3	1.1	1.6e-25	89.2	0.1	1.5	2	0	0	2	2	2	1	Archaeal	PaREP1/PaREP8	family
DUF3500	PF12006.3	gi|15921029|ref|NP_376698.1|	-	0.063	12.2	0.0	0.098	11.5	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3500)
Mistic	PF11458.3	gi|15921029|ref|NP_376698.1|	-	0.12	12.7	2.0	0.18	12.2	0.2	2.1	2	1	1	3	3	3	0	Membrane-integrating	protein	Mistic
AA_permease_2	PF13520.1	gi|15921030|ref|NP_376699.1|	-	5.5e-29	100.9	43.7	7.5e-29	100.5	30.3	1.1	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|15921030|ref|NP_376699.1|	-	2.5e-23	82.2	42.7	3.8e-23	81.5	29.6	1.2	1	0	0	1	1	1	1	Amino	acid	permease
ABA_WDS	PF02496.11	gi|15921030|ref|NP_376699.1|	-	0.13	12.4	0.0	0.34	11.1	0.0	1.6	1	0	0	1	1	1	0	ABA/WDS	induced	protein
DUF3353	PF11833.3	gi|15921030|ref|NP_376699.1|	-	0.52	9.7	7.7	0.37	10.2	2.5	2.7	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3353)
NTP_transf_2	PF01909.18	gi|15921033|ref|NP_376702.1|	-	7.6e-14	51.8	1.2	8.4e-14	51.6	0.9	1.1	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
Flavodoxin_5	PF12724.2	gi|15921033|ref|NP_376702.1|	-	0.055	13.4	0.0	8.3	6.4	0.0	2.0	1	1	1	2	2	2	0	Flavodoxin	domain
HEPN	PF05168.9	gi|15921034|ref|NP_376703.1|	-	2.2e-26	92.0	0.1	2.5e-26	91.8	0.1	1.0	1	0	0	1	1	1	1	HEPN	domain
ABC_tran	PF00005.22	gi|15921036|ref|NP_376705.1|	-	1.3e-06	28.7	0.0	1.6e-06	28.4	0.0	1.1	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|15921036|ref|NP_376705.1|	-	0.00076	19.5	0.4	0.001	19.1	0.3	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_23	PF13476.1	gi|15921036|ref|NP_376705.1|	-	0.0015	18.8	0.1	0.0018	18.6	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|15921036|ref|NP_376705.1|	-	0.0016	17.9	0.0	0.0026	17.2	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA	PF00004.24	gi|15921036|ref|NP_376705.1|	-	0.014	15.6	0.0	0.019	15.1	0.0	1.2	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
SMC_N	PF02463.14	gi|15921036|ref|NP_376705.1|	-	0.016	14.4	0.1	0.023	13.9	0.0	1.4	1	1	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
T2SE	PF00437.15	gi|15921036|ref|NP_376705.1|	-	0.051	12.4	0.0	0.051	12.4	0.0	1.1	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
Mg_chelatase	PF01078.16	gi|15921036|ref|NP_376705.1|	-	0.071	12.2	0.0	0.088	11.9	0.0	1.1	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
Rad17	PF03215.10	gi|15921036|ref|NP_376705.1|	-	0.11	11.1	0.0	0.12	11.0	0.0	1.1	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
HTH_34	PF13601.1	gi|15921037|ref|NP_376706.1|	-	4.1e-08	33.1	0.2	4.9e-08	32.8	0.1	1.1	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|15921037|ref|NP_376706.1|	-	4.7e-08	32.5	0.0	7.2e-08	31.9	0.0	1.3	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|15921037|ref|NP_376706.1|	-	1.1e-07	31.4	1.5	1.6e-07	30.9	0.9	1.5	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_5	PF01022.15	gi|15921037|ref|NP_376706.1|	-	1.7e-07	30.8	1.7	2e-07	30.5	0.4	1.6	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_27	PF13463.1	gi|15921037|ref|NP_376706.1|	-	1.9e-07	31.3	0.1	2.5e-07	30.9	0.1	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HxlR	PF01638.12	gi|15921037|ref|NP_376706.1|	-	1.6e-05	24.4	0.5	2e-05	24.1	0.4	1.1	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_24	PF13412.1	gi|15921037|ref|NP_376706.1|	-	1.8e-05	24.0	2.3	3e-05	23.3	1.6	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.17	gi|15921037|ref|NP_376706.1|	-	1.8e-05	24.3	0.4	3e-05	23.6	0.3	1.3	1	0	0	1	1	1	1	MarR	family
Sulfolobus_pRN	PF05584.6	gi|15921037|ref|NP_376706.1|	-	0.00019	21.3	0.4	0.0003	20.6	0.3	1.3	1	0	0	1	1	1	1	Sulfolobus	plasmid	regulatory	protein
HTH_20	PF12840.2	gi|15921037|ref|NP_376706.1|	-	0.00047	19.9	0.1	0.00068	19.3	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
B-block_TFIIIC	PF04182.7	gi|15921037|ref|NP_376706.1|	-	0.00065	19.4	0.1	0.0011	18.7	0.1	1.6	1	1	0	1	1	1	1	B-block	binding	subunit	of	TFIIIC
HTH_11	PF08279.7	gi|15921037|ref|NP_376706.1|	-	0.001	18.6	1.3	0.0019	17.8	0.9	1.4	1	0	0	1	1	1	1	HTH	domain
GntR	PF00392.16	gi|15921037|ref|NP_376706.1|	-	0.0012	18.1	0.4	0.0022	17.4	0.1	1.6	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	gntR	family
HTH_36	PF13730.1	gi|15921037|ref|NP_376706.1|	-	0.0033	17.5	0.2	0.0049	16.9	0.2	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_45	PF14947.1	gi|15921037|ref|NP_376706.1|	-	0.005	16.6	1.4	0.0071	16.1	1.0	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_12	PF08461.5	gi|15921037|ref|NP_376706.1|	-	0.015	14.9	2.4	0.062	13.0	1.7	1.9	1	1	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
S10_plectin	PF03501.10	gi|15921037|ref|NP_376706.1|	-	0.017	14.9	0.0	0.025	14.4	0.0	1.3	1	0	0	1	1	1	0	Plectin/S10	domain
Rrf2	PF02082.15	gi|15921037|ref|NP_376706.1|	-	0.019	15.0	0.1	0.029	14.5	0.1	1.2	1	0	0	1	1	1	0	Transcriptional	regulator
DUF2250	PF10007.4	gi|15921037|ref|NP_376706.1|	-	0.022	14.6	0.2	0.04	13.8	0.1	1.4	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Ribosomal_L12	PF00542.14	gi|15921037|ref|NP_376706.1|	-	0.063	13.2	0.2	0.091	12.7	0.1	1.3	1	0	0	1	1	1	0	Ribosomal	protein	L7/L12	C-terminal	domain
Fe_dep_repress	PF01325.14	gi|15921037|ref|NP_376706.1|	-	0.077	12.9	0.1	0.16	11.9	0.1	1.4	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
IU_nuc_hydro	PF01156.14	gi|15921038|ref|NP_376707.1|	-	7.9e-83	278.2	0.0	9.5e-83	277.9	0.0	1.0	1	0	0	1	1	1	1	Inosine-uridine	preferring	nucleoside	hydrolase
FAD_binding_4	PF01565.18	gi|15921039|ref|NP_376708.1|	-	9.9e-10	38.0	0.0	1.6e-09	37.3	0.0	1.2	1	0	0	1	1	1	1	FAD	binding	domain
Methyltransf_4	PF02390.12	gi|15921040|ref|NP_376709.1|	-	0.025	13.6	0.1	0.032	13.2	0.0	1.1	1	0	0	1	1	1	0	Putative	methyltransferase
Cas_Csa4	PF09703.5	gi|15921040|ref|NP_376709.1|	-	0.031	13.2	0.3	0.041	12.8	0.2	1.2	1	0	0	1	1	1	0	CRISPR-associated	protein	(Cas_Csa4)
AIRC	PF00731.15	gi|15921041|ref|NP_376710.1|	-	4.4e-69	230.5	0.4	4.9e-69	230.3	0.3	1.0	1	0	0	1	1	1	1	AIR	carboxylase
DUF4419	PF14388.1	gi|15921041|ref|NP_376710.1|	-	0.0086	15.3	0.0	0.011	14.9	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4419)
Fe-ADH	PF00465.14	gi|15921041|ref|NP_376710.1|	-	0.014	14.0	0.1	0.023	13.3	0.1	1.3	1	0	0	1	1	1	0	Iron-containing	alcohol	dehydrogenase
Fe-ADH_2	PF13685.1	gi|15921041|ref|NP_376710.1|	-	0.025	13.9	0.0	0.03	13.6	0.0	1.1	1	0	0	1	1	1	0	Iron-containing	alcohol	dehydrogenase
Glutaredoxin	PF00462.19	gi|15921041|ref|NP_376710.1|	-	0.042	13.8	0.0	0.092	12.7	0.0	1.6	1	0	0	1	1	1	0	Glutaredoxin
ATP-grasp	PF02222.17	gi|15921042|ref|NP_376711.1|	-	1.3e-48	164.5	0.0	2e-48	163.9	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_3	PF02655.9	gi|15921042|ref|NP_376711.1|	-	0.00023	21.0	0.0	0.00051	19.9	0.0	1.6	1	1	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|15921042|ref|NP_376711.1|	-	0.00055	19.7	0.0	0.0017	18.0	0.0	1.8	2	0	0	2	2	2	1	ATP-grasp	domain
GARS_A	PF01071.14	gi|15921042|ref|NP_376711.1|	-	0.014	14.9	0.0	0.036	13.6	0.0	1.7	2	0	0	2	2	2	0	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
DUF1474	PF07342.6	gi|15921042|ref|NP_376711.1|	-	0.2	11.9	3.0	2.3	8.4	1.1	3.1	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF1474)
HTH_1	PF00126.22	gi|15921043|ref|NP_376712.1|	-	7e-05	22.4	0.0	0.00011	21.8	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
Bet_v_1	PF00407.14	gi|15921043|ref|NP_376712.1|	-	0.013	15.1	2.0	0.017	14.7	1.4	1.2	1	0	0	1	1	1	0	Pathogenesis-related	protein	Bet	v	I	family
MCPsignal	PF00015.16	gi|15921043|ref|NP_376712.1|	-	0.08	12.4	0.5	0.11	11.9	0.2	1.4	1	1	0	1	1	1	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
KMP11	PF03037.11	gi|15921043|ref|NP_376712.1|	-	0.083	13.4	0.5	0.18	12.4	0.4	1.5	1	0	0	1	1	1	0	Kinetoplastid	membrane	protein	11
Pkinase	PF00069.20	gi|15921045|ref|NP_376714.1|	-	2.1e-26	92.6	0.0	3.6e-26	91.8	0.0	1.3	1	0	0	1	1	1	1	Protein	kinase	domain
Apc3	PF12895.2	gi|15921045|ref|NP_376714.1|	-	5.1e-12	45.7	8.0	1e-09	38.3	2.0	2.7	2	0	0	2	2	2	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
Pkinase_Tyr	PF07714.12	gi|15921045|ref|NP_376714.1|	-	1.6e-11	43.7	0.2	4.6e-11	42.2	0.1	1.7	1	1	0	1	1	1	1	Protein	tyrosine	kinase
TPR_16	PF13432.1	gi|15921045|ref|NP_376714.1|	-	4.8e-09	36.6	6.9	0.0057	17.2	2.1	3.8	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|15921045|ref|NP_376714.1|	-	1.4e-08	34.9	7.0	1.4e-05	25.3	1.1	3.2	3	0	0	3	3	3	2	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|15921045|ref|NP_376714.1|	-	3.7e-08	33.3	3.5	0.15	12.8	0.3	4.0	2	2	1	3	3	3	3	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|15921045|ref|NP_376714.1|	-	4.5e-07	29.2	13.8	0.00098	18.8	0.5	4.7	3	1	1	4	4	4	2	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|15921045|ref|NP_376714.1|	-	6.5e-07	28.6	11.8	0.00078	18.9	0.2	4.6	4	0	0	4	4	4	2	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|15921045|ref|NP_376714.1|	-	1.7e-06	27.5	8.3	1.2e-05	24.8	1.9	3.9	2	2	2	4	4	4	3	TPR	repeat
TPR_12	PF13424.1	gi|15921045|ref|NP_376714.1|	-	2.9e-06	27.1	8.8	0.00075	19.3	2.8	3.6	2	2	2	4	4	4	3	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|15921045|ref|NP_376714.1|	-	1.2e-05	24.6	5.5	0.77	9.7	0.1	4.0	2	1	1	3	3	3	2	Tetratricopeptide	repeat
TPR_10	PF13374.1	gi|15921045|ref|NP_376714.1|	-	0.00033	20.4	3.8	0.95	9.4	0.0	3.4	3	0	0	3	3	3	2	Tetratricopeptide	repeat
BTAD	PF03704.12	gi|15921045|ref|NP_376714.1|	-	0.00052	20.3	0.1	0.0048	17.1	0.1	2.3	2	0	0	2	2	2	1	Bacterial	transcriptional	activator	domain
TPR_8	PF13181.1	gi|15921045|ref|NP_376714.1|	-	0.00058	19.4	10.1	0.017	14.8	0.1	4.7	3	1	1	4	4	4	1	Tetratricopeptide	repeat
PPR	PF01535.15	gi|15921045|ref|NP_376714.1|	-	0.006	16.4	3.7	3.7	7.7	0.0	4.3	4	0	0	4	4	3	1	PPR	repeat
TPR_15	PF13429.1	gi|15921045|ref|NP_376714.1|	-	0.0069	15.4	1.1	0.05	12.6	0.3	2.1	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|15921045|ref|NP_376714.1|	-	0.011	16.1	11.7	1.8	9.1	0.2	5.3	6	0	0	6	6	5	0	Tetratricopeptide	repeat
DUF1955	PF09205.5	gi|15921045|ref|NP_376714.1|	-	0.031	13.7	0.3	0.031	13.7	0.2	2.9	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF1955)
APH	PF01636.18	gi|15921045|ref|NP_376714.1|	-	0.058	13.1	0.0	9.2	5.9	0.0	2.6	1	1	1	2	2	2	0	Phosphotransferase	enzyme	family
SPOB_a	PF14689.1	gi|15921045|ref|NP_376714.1|	-	0.074	12.6	1.0	2.5	7.7	0.0	3.1	3	0	0	3	3	2	0	Sensor_kinase_SpoOB-type,	alpha-helical	domain
CLTH	PF10607.4	gi|15921045|ref|NP_376714.1|	-	0.09	12.4	2.5	0.31	10.7	1.7	1.9	1	1	0	1	1	1	0	CTLH/CRA	C-terminal	to	LisH	motif	domain
DUF3366	PF11846.3	gi|15921045|ref|NP_376714.1|	-	0.15	11.9	0.2	0.98	9.2	0.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3366)
TPR_20	PF14561.1	gi|15921045|ref|NP_376714.1|	-	0.15	12.1	1.2	0.49	10.5	0.4	2.2	2	0	0	2	2	2	0	Tetratricopeptide	repeat
Foie-gras_1	PF11817.3	gi|15921045|ref|NP_376714.1|	-	1.7	8.0	4.9	2.5	7.5	0.6	2.3	2	0	0	2	2	2	0	Foie	gras	liver	health	family	1
Ribonuc_L-PSP	PF01042.16	gi|15921046|ref|NP_376715.1|	-	2e-44	150.2	0.1	2.2e-44	150.0	0.0	1.0	1	0	0	1	1	1	1	Endoribonuclease	L-PSP
Hydantoinase_A	PF01968.13	gi|15921046|ref|NP_376715.1|	-	0.14	11.2	0.0	0.16	11.0	0.0	1.1	1	0	0	1	1	1	0	Hydantoinase/oxoprolinase
DUF3211	PF11485.3	gi|15921047|ref|NP_376716.1|	-	2.3e-43	147.5	1.7	2.8e-43	147.2	1.2	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3211)
CBS	PF00571.23	gi|15921048|ref|NP_376717.1|	-	1.5e-51	171.9	7.3	3.5e-13	49.0	0.0	4.1	4	0	0	4	4	4	4	CBS	domain
GDE_C	PF06202.9	gi|15921049|ref|NP_376718.1|	-	5.7e-126	420.1	0.0	7.8e-126	419.7	0.0	1.1	1	0	0	1	1	1	1	Amylo-alpha-1,6-glucosidase
GDE_N	PF12439.3	gi|15921049|ref|NP_376718.1|	-	5.1e-54	182.8	1.4	7.6e-54	182.2	1.0	1.2	1	0	0	1	1	1	1	Glycogen	debranching	enzyme	N	terminal
DUF608	PF04685.8	gi|15921049|ref|NP_376718.1|	-	1.3e-09	37.2	0.3	2.3e-09	36.4	0.2	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF608
Bac_rhamnosid	PF05592.6	gi|15921049|ref|NP_376718.1|	-	7.1e-06	24.5	0.1	1.1e-05	23.9	0.1	1.2	1	0	0	1	1	1	1	Bacterial	alpha-L-rhamnosidase
Glyco_hydro_100	PF12899.2	gi|15921049|ref|NP_376718.1|	-	0.024	13.0	0.2	0.31	9.3	0.0	2.4	3	0	0	3	3	3	0	Alkaline	and	neutral	invertase
Glyco_hydro_15	PF00723.16	gi|15921050|ref|NP_376719.1|	-	2.4e-19	69.2	0.5	3.9e-16	58.6	0.6	3.0	1	1	1	2	2	2	2	Glycosyl	hydrolases	family	15
DUF608	PF04685.8	gi|15921050|ref|NP_376719.1|	-	0.00089	18.0	0.1	0.0033	16.1	0.0	1.8	1	1	1	2	2	2	1	Protein	of	unknown	function,	DUF608
TPR_14	PF13428.1	gi|15921050|ref|NP_376719.1|	-	0.11	13.2	0.1	0.39	11.4	0.0	1.9	1	0	0	1	1	1	0	Tetratricopeptide	repeat
NTP_transferase	PF00483.18	gi|15921051|ref|NP_376720.1|	-	3.7e-41	141.0	0.0	5e-41	140.6	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
Hexapep	PF00132.19	gi|15921051|ref|NP_376720.1|	-	8.2e-09	34.5	13.5	0.002	17.5	0.3	4.3	2	1	2	4	4	4	4	Bacterial	transferase	hexapeptide	(six	repeats)
NTP_transf_3	PF12804.2	gi|15921051|ref|NP_376720.1|	-	0.00031	20.8	0.0	0.00049	20.2	0.0	1.4	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep_2	PF14602.1	gi|15921051|ref|NP_376720.1|	-	0.043	13.3	6.5	3.3	7.3	0.3	3.4	3	0	0	3	3	3	0	Hexapeptide	repeat	of	succinyl-transferase
Glyco_hydro_57	PF03065.10	gi|15921052|ref|NP_376721.1|	-	4e-81	272.7	4.0	2.5e-80	270.1	2.7	2.0	1	1	0	1	1	1	1	Glycosyl	hydrolase	family	57
Polysacc_deac_1	PF01522.16	gi|15921052|ref|NP_376721.1|	-	0.028	14.0	0.0	0.18	11.4	0.0	2.1	2	0	0	2	2	2	0	Polysaccharide	deacetylase
Glycos_transf_1	PF00534.15	gi|15921053|ref|NP_376722.1|	-	1.4e-35	122.2	0.0	2.5e-35	121.4	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_5	PF08323.6	gi|15921053|ref|NP_376722.1|	-	2.3e-33	115.7	0.3	3.5e-33	115.1	0.2	1.2	1	0	0	1	1	1	1	Starch	synthase	catalytic	domain
Glyco_trans_1_4	PF13692.1	gi|15921053|ref|NP_376722.1|	-	4.2e-11	43.1	0.1	8.1e-11	42.2	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.1	gi|15921053|ref|NP_376722.1|	-	2.9e-09	37.2	0.7	2.3e-08	34.3	0.5	2.2	1	1	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_1_2	PF13524.1	gi|15921053|ref|NP_376722.1|	-	6.5e-06	26.3	0.1	0.00014	22.0	0.0	2.6	2	1	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|15921053|ref|NP_376722.1|	-	0.0023	17.7	0.9	0.0084	15.8	0.0	2.2	2	0	0	2	2	2	1	Glycosyltransferase	Family	4
Glyco_trans_4_2	PF13477.1	gi|15921053|ref|NP_376722.1|	-	0.034	13.9	0.1	5.4	6.8	0.0	2.6	2	0	0	2	2	2	0	Glycosyl	transferase	4-like
Oxidored_molyb	PF00174.14	gi|15921054|ref|NP_376723.1|	-	2.9e-47	160.2	0.0	3.5e-47	159.9	0.0	1.0	1	0	0	1	1	1	1	Oxidoreductase	molybdopterin	binding	domain
Cpn60_TCP1	PF00118.19	gi|15921055|ref|NP_376724.1|	-	1.2e-152	508.9	15.3	1.4e-152	508.7	10.6	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
TRAM	PF01938.15	gi|15921055|ref|NP_376724.1|	-	0.036	13.8	0.1	0.11	12.3	0.1	1.8	1	0	0	1	1	1	0	TRAM	domain
LemA	PF04011.7	gi|15921056|ref|NP_376725.1|	-	0.0027	16.8	0.1	0.0031	16.6	0.0	1.1	1	0	0	1	1	1	1	LemA	family
FancD2	PF14631.1	gi|15921056|ref|NP_376725.1|	-	0.086	9.9	0.1	0.1	9.6	0.0	1.0	1	0	0	1	1	1	0	Fanconi	anaemia	protein	FancD2	nuclease
CoA_trans	PF01144.18	gi|15921057|ref|NP_376726.1|	-	1.6e-32	112.4	0.0	1.8e-32	112.2	0.0	1.0	1	0	0	1	1	1	1	Coenzyme	A	transferase
CoA_trans	PF01144.18	gi|15921058|ref|NP_376727.1|	-	6.6e-24	84.3	0.1	7.3e-24	84.1	0.1	1.0	1	0	0	1	1	1	1	Coenzyme	A	transferase
Methyltransf_11	PF08241.7	gi|15921059|ref|NP_376728.1|	-	2.4e-06	27.9	0.0	1.2e-05	25.7	0.0	2.0	2	0	0	2	2	2	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|15921059|ref|NP_376728.1|	-	0.013	14.6	0.0	0.018	14.1	0.0	1.2	1	0	0	1	1	1	0	ubiE/COQ5	methyltransferase	family
MTS	PF05175.9	gi|15921059|ref|NP_376728.1|	-	0.025	13.9	0.0	0.074	12.4	0.0	1.8	2	0	0	2	2	2	0	Methyltransferase	small	domain
DUF2045	PF09741.4	gi|15921059|ref|NP_376728.1|	-	0.071	12.2	0.0	0.1	11.6	0.0	1.3	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2045)
CBS	PF00571.23	gi|15921060|ref|NP_376729.1|	-	1.9e-29	101.1	0.5	1.2e-13	50.6	0.2	2.0	2	0	0	2	2	2	2	CBS	domain
DSBA	PF01323.15	gi|15921061|ref|NP_376730.1|	-	4e-24	85.2	2.4	4e-16	59.1	0.1	2.1	2	0	0	2	2	2	2	DSBA-like	thioredoxin	domain
Thioredoxin_5	PF13743.1	gi|15921061|ref|NP_376730.1|	-	1.4e-20	73.6	0.4	4.2e-20	72.0	0.3	1.7	1	1	0	1	1	1	1	Thioredoxin
Thioredoxin_4	PF13462.1	gi|15921061|ref|NP_376730.1|	-	2.4e-11	43.8	2.1	7.1e-09	35.8	0.1	2.2	1	1	1	2	2	2	2	Thioredoxin
Thioredoxin_3	PF13192.1	gi|15921061|ref|NP_376730.1|	-	1.1e-06	28.3	0.2	3.5e-05	23.5	0.1	2.3	2	0	0	2	2	2	1	Thioredoxin	domain
Thioredoxin_2	PF13098.1	gi|15921061|ref|NP_376730.1|	-	3.7e-05	23.8	0.8	0.0021	18.2	0.6	2.3	1	1	0	1	1	1	1	Thioredoxin-like	domain
HTH_AraC	PF00165.18	gi|15921061|ref|NP_376730.1|	-	0.11	12.3	0.0	0.31	10.9	0.0	1.7	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	proteins,	AraC	family
VWA_2	PF13519.1	gi|15921062|ref|NP_376731.1|	-	9.5e-18	64.8	0.0	2e-17	63.8	0.0	1.6	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.23	gi|15921062|ref|NP_376731.1|	-	2.1e-10	40.6	0.0	6.8e-10	38.9	0.0	1.8	1	1	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA_3	PF13768.1	gi|15921062|ref|NP_376731.1|	-	1.4e-09	37.8	0.0	4.7e-09	36.1	0.0	1.8	1	1	0	1	1	1	1	von	Willebrand	factor	type	A	domain
vWA-TerF-like	PF10138.4	gi|15921062|ref|NP_376731.1|	-	0.0042	16.9	0.0	0.0091	15.8	0.0	1.6	1	1	0	1	1	1	1	vWA	found	in	TerF	C	terminus
FHA	PF00498.21	gi|15921063|ref|NP_376732.1|	-	1.7e-16	60.0	0.0	2.9e-16	59.3	0.0	1.3	1	0	0	1	1	1	1	FHA	domain
zinc_ribbon_2	PF13240.1	gi|15921063|ref|NP_376732.1|	-	7.2e-07	28.5	3.2	1.3e-06	27.6	2.2	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|15921063|ref|NP_376732.1|	-	9.8e-07	27.7	2.3	1.6e-06	27.1	1.6	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-RanBP	PF00641.13	gi|15921063|ref|NP_376732.1|	-	1.8e-05	23.7	1.4	2.6e-05	23.2	1.0	1.2	1	0	0	1	1	1	1	Zn-finger	in	Ran	binding	protein	and	others
DZR	PF12773.2	gi|15921063|ref|NP_376732.1|	-	6.1e-05	22.7	2.0	9.7e-05	22.1	1.4	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
Prok-RING_1	PF14446.1	gi|15921063|ref|NP_376732.1|	-	0.91	9.3	3.8	1.4	8.7	2.6	1.2	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
VWA_2	PF13519.1	gi|15921064|ref|NP_376733.1|	-	5.5e-24	85.1	0.2	2.1e-23	83.2	0.0	2.0	1	1	1	2	2	2	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.23	gi|15921064|ref|NP_376733.1|	-	1.2e-17	64.2	0.2	2.4e-17	63.2	0.1	1.4	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA_3	PF13768.1	gi|15921064|ref|NP_376733.1|	-	3.5e-14	52.7	0.0	1.2e-13	51.0	0.0	1.8	2	0	0	2	2	2	1	von	Willebrand	factor	type	A	domain
VWA_CoxE	PF05762.9	gi|15921064|ref|NP_376733.1|	-	0.00062	18.9	0.2	0.0013	17.8	0.0	1.6	2	0	0	2	2	2	1	VWA	domain	containing	CoxE-like	protein
Sec23_trunk	PF04811.10	gi|15921064|ref|NP_376733.1|	-	0.0044	16.3	0.0	0.076	12.3	0.0	2.4	2	0	0	2	2	2	1	Sec23/Sec24	trunk	domain
DUF2201	PF09967.4	gi|15921064|ref|NP_376733.1|	-	0.0054	16.7	0.8	0.0088	16.0	0.1	1.7	2	0	0	2	2	2	1	VWA-like	domain	(DUF2201)
vWA-TerF-like	PF10138.4	gi|15921064|ref|NP_376733.1|	-	0.011	15.6	0.1	0.036	13.8	0.0	1.8	2	0	0	2	2	2	0	vWA	found	in	TerF	C	terminus
Flu_M1_C	PF08289.6	gi|15921064|ref|NP_376733.1|	-	0.015	15.3	2.3	0.27	11.3	1.1	2.5	1	1	1	2	2	2	0	Influenza	Matrix	protein	(M1)	C-terminal	domain
Antitoxin-MazE	PF04014.13	gi|15921065|ref|NP_376734.1|	-	3.3e-10	39.4	1.2	3.7e-10	39.3	0.9	1.1	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
eIF-1a	PF01176.14	gi|15921065|ref|NP_376734.1|	-	0.00065	19.0	1.3	0.00076	18.8	0.4	1.5	1	1	1	2	2	2	1	Translation	initiation	factor	1A	/	IF-1
DUF1989	PF09347.5	gi|15921065|ref|NP_376734.1|	-	0.12	11.7	0.0	0.14	11.6	0.0	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1989)
DUF402	PF04167.8	gi|15921066|ref|NP_376735.1|	-	2.7e-19	68.7	1.6	6.1e-19	67.6	1.1	1.7	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF402)
RNase_E_G	PF10150.4	gi|15921066|ref|NP_376735.1|	-	0.022	14.0	0.1	0.033	13.4	0.1	1.4	1	0	0	1	1	1	0	Ribonuclease	E/G	family
Aconitase	PF00330.15	gi|15921067|ref|NP_376736.1|	-	1.6e-130	435.7	0.0	2.4e-130	435.1	0.0	1.3	1	0	0	1	1	1	1	Aconitase	family	(aconitate	hydratase)
Aconitase_C	PF00694.14	gi|15921067|ref|NP_376736.1|	-	9.2e-35	119.6	0.0	2e-34	118.5	0.0	1.5	1	0	0	1	1	1	1	Aconitase	C-terminal	domain
NTP_transf_2	PF01909.18	gi|15921068|ref|NP_376737.1|	-	0.011	16.0	0.0	0.022	15.0	0.0	1.6	1	0	0	1	1	1	0	Nucleotidyltransferase	domain
DUF2258	PF10015.4	gi|15921069|ref|NP_376738.1|	-	5.5e-32	109.4	1.9	5.5e-32	109.4	1.3	2.1	2	1	0	2	2	2	1	Uncharacterized	protein	conserved	in	archaea	(DUF2258)
Tenui_NCP	PF04876.7	gi|15921069|ref|NP_376738.1|	-	0.00086	18.8	0.9	0.0013	18.2	0.6	1.3	1	0	0	1	1	1	1	Tenuivirus	major	non-capsid	protein
Spherulin4	PF12138.3	gi|15921069|ref|NP_376738.1|	-	0.0018	17.7	0.1	0.0022	17.4	0.0	1.2	1	0	0	1	1	1	1	Spherulation-specific	family	4
Streptin-Immun	PF11083.3	gi|15921069|ref|NP_376738.1|	-	0.021	14.8	7.6	0.021	14.8	5.3	2.4	2	1	1	3	3	3	0	Lantibiotic	streptin	immunity	protein
Laminin_II	PF06009.7	gi|15921069|ref|NP_376738.1|	-	0.046	13.4	0.6	0.046	13.4	0.4	2.1	1	1	1	2	2	2	0	Laminin	Domain	II
DivIVA	PF05103.8	gi|15921069|ref|NP_376738.1|	-	0.061	13.3	9.7	0.15	12.0	3.7	2.4	2	1	0	2	2	2	0	DivIVA	protein
WXG100	PF06013.7	gi|15921069|ref|NP_376738.1|	-	0.062	13.3	1.3	0.098	12.6	0.2	1.8	2	0	0	2	2	2	0	Proteins	of	100	residues	with	WXG
DUF1664	PF07889.7	gi|15921069|ref|NP_376738.1|	-	0.079	12.7	2.0	0.1	12.4	0.7	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
Pyrophosphatase	PF00719.14	gi|15921069|ref|NP_376738.1|	-	0.09	12.2	1.9	0.15	11.5	1.3	1.5	1	0	0	1	1	1	0	Inorganic	pyrophosphatase
AAA_11	PF13086.1	gi|15921069|ref|NP_376738.1|	-	0.12	11.9	3.5	0.13	11.8	2.4	1.1	1	0	0	1	1	1	0	AAA	domain
PhaP_Bmeg	PF09602.5	gi|15921069|ref|NP_376738.1|	-	0.15	11.8	7.7	0.2	11.4	4.6	1.6	1	1	0	1	1	1	0	Polyhydroxyalkanoic	acid	inclusion	protein	(PhaP_Bmeg)
DUF2361	PF10153.4	gi|15921069|ref|NP_376738.1|	-	0.19	11.8	12.2	0.06	13.5	6.2	1.9	2	0	0	2	2	2	0	Uncharacterised	conserved	protein	(DUF2361)
AATF-Che1	PF13339.1	gi|15921069|ref|NP_376738.1|	-	0.26	11.4	5.1	0.24	11.5	1.1	2.1	2	1	0	2	2	2	0	Apoptosis	antagonizing	transcription	factor
Microtub_assoc	PF07989.6	gi|15921069|ref|NP_376738.1|	-	0.28	11.0	7.5	0.5	10.2	4.1	2.2	1	1	1	2	2	2	0	Microtubule	associated
SlyX	PF04102.7	gi|15921069|ref|NP_376738.1|	-	0.43	10.9	4.1	0.44	10.9	0.3	2.4	2	0	0	2	2	2	0	SlyX
DASH_Spc34	PF08657.5	gi|15921069|ref|NP_376738.1|	-	0.61	9.6	9.8	1.7	8.2	6.8	2.0	1	1	0	1	1	1	0	DASH	complex	subunit	Spc34
YtxH	PF12732.2	gi|15921069|ref|NP_376738.1|	-	0.86	10.0	3.6	2.2	8.7	2.5	1.7	1	0	0	1	1	1	0	YtxH-like	protein
Inhibitor_I29	PF08246.7	gi|15921069|ref|NP_376738.1|	-	1	9.6	3.6	3	8.1	2.4	1.9	1	1	0	1	1	1	0	Cathepsin	propeptide	inhibitor	domain	(I29)
FTCD_C	PF04961.7	gi|15921069|ref|NP_376738.1|	-	2	7.8	4.5	9.8	5.5	1.1	2.3	2	0	0	2	2	2	0	Formiminotransferase-cyclodeaminase
Seryl_tRNA_N	PF02403.17	gi|15921069|ref|NP_376738.1|	-	2	8.4	9.5	0.11	12.5	2.3	2.0	3	0	0	3	3	2	0	Seryl-tRNA	synthetase	N-terminal	domain
Med21	PF11221.3	gi|15921069|ref|NP_376738.1|	-	2.5	8.0	6.7	20	5.1	3.4	2.4	2	0	0	2	2	2	0	Subunit	21	of	Mediator	complex
IncA	PF04156.9	gi|15921069|ref|NP_376738.1|	-	2.6	7.6	9.5	3.9	7.0	6.1	1.7	1	1	0	1	1	1	0	IncA	protein
TMF_DNA_bd	PF12329.3	gi|15921069|ref|NP_376738.1|	-	3	7.6	11.4	0.81	9.5	5.4	2.0	2	0	0	2	2	1	0	TATA	element	modulatory	factor	1	DNA	binding
Phage_GP20	PF06810.6	gi|15921069|ref|NP_376738.1|	-	3.7	6.9	11.9	1.9	7.9	4.8	2.5	2	1	1	3	3	3	0	Phage	minor	structural	protein	GP20
DUF4337	PF14235.1	gi|15921069|ref|NP_376738.1|	-	5.4	6.8	7.2	1	9.1	2.3	1.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4337)
Peptidase_M48	PF01435.13	gi|15921070|ref|NP_376739.1|	-	1.7e-34	119.3	0.0	2.7e-34	118.7	0.0	1.3	1	0	0	1	1	1	1	Peptidase	family	M48
Peptidase_M56	PF05569.6	gi|15921070|ref|NP_376739.1|	-	0.022	13.7	0.2	0.022	13.7	0.2	1.8	2	1	0	2	2	2	0	BlaR1	peptidase	M56
Peptidase_MA_2	PF13485.1	gi|15921070|ref|NP_376739.1|	-	0.077	13.0	0.1	6.2	6.8	0.0	2.4	3	0	0	3	3	3	0	Peptidase	MA	superfamily
DUF955	PF06114.8	gi|15921070|ref|NP_376739.1|	-	0.17	11.6	0.4	0.34	10.6	0.0	1.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF955)
HemY_N	PF07219.8	gi|15921070|ref|NP_376739.1|	-	0.44	10.1	10.1	0.87	9.1	0.4	2.6	2	1	0	2	2	2	0	HemY	protein	N-terminus
TrmB	PF01978.14	gi|15921071|ref|NP_376740.1|	-	2.4e-13	49.5	0.2	3.8e-13	48.9	0.2	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|15921071|ref|NP_376740.1|	-	2.5e-11	43.0	0.0	3.5e-11	42.6	0.0	1.2	1	0	0	1	1	1	1	MarR	family
TFIIE_alpha	PF02002.12	gi|15921071|ref|NP_376740.1|	-	9.6e-11	41.1	4.0	1.2e-10	40.7	2.8	1.0	1	0	0	1	1	1	1	TFIIE	alpha	subunit
MarR	PF01047.17	gi|15921071|ref|NP_376740.1|	-	1.9e-08	33.9	0.2	3.2e-08	33.1	0.1	1.4	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.1	gi|15921071|ref|NP_376740.1|	-	7.6e-08	32.5	0.2	1.2e-07	31.9	0.1	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_5	PF01022.15	gi|15921071|ref|NP_376740.1|	-	1.7e-07	30.8	0.6	2.9e-07	30.0	0.4	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
Fe_dep_repress	PF01325.14	gi|15921071|ref|NP_376740.1|	-	1e-06	28.5	1.0	2.1e-06	27.5	0.2	1.8	2	0	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_34	PF13601.1	gi|15921071|ref|NP_376740.1|	-	1.2e-06	28.4	0.3	2.2e-06	27.6	0.2	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_24	PF13412.1	gi|15921071|ref|NP_376740.1|	-	1.6e-06	27.3	0.4	2.6e-06	26.7	0.3	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|15921071|ref|NP_376740.1|	-	7.8e-06	25.4	0.2	1.5e-05	24.5	0.2	1.5	1	0	0	1	1	1	1	HTH	domain
HTH_20	PF12840.2	gi|15921071|ref|NP_376740.1|	-	2.1e-05	24.2	0.1	3.2e-05	23.6	0.1	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_IclR	PF09339.5	gi|15921071|ref|NP_376740.1|	-	4.2e-05	23.0	0.0	5.8e-05	22.5	0.0	1.2	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
DUF4423	PF14394.1	gi|15921071|ref|NP_376740.1|	-	0.00011	21.8	1.1	0.00013	21.5	0.7	1.3	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
GntR	PF00392.16	gi|15921071|ref|NP_376740.1|	-	0.00031	20.1	0.1	0.00054	19.3	0.1	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
Penicillinase_R	PF03965.11	gi|15921071|ref|NP_376740.1|	-	0.0007	19.6	0.5	0.00099	19.1	0.3	1.4	1	1	0	1	1	1	1	Penicillinase	repressor
HTH_Crp_2	PF13545.1	gi|15921071|ref|NP_376740.1|	-	0.00081	19.1	0.0	0.0091	15.7	0.0	2.1	1	1	1	2	2	2	1	Crp-like	helix-turn-helix	domain
Rrf2	PF02082.15	gi|15921071|ref|NP_376740.1|	-	0.0019	18.2	0.2	0.0034	17.4	0.1	1.4	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_DeoR	PF08220.7	gi|15921071|ref|NP_376740.1|	-	0.004	16.6	0.3	0.0082	15.6	0.1	1.5	2	0	0	2	2	1	1	DeoR-like	helix-turn-helix	domain
DUF2250	PF10007.4	gi|15921071|ref|NP_376740.1|	-	0.0054	16.6	1.9	0.0071	16.2	1.3	1.3	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
GerE	PF00196.14	gi|15921071|ref|NP_376740.1|	-	0.0082	15.4	0.1	0.014	14.6	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	luxR	family
DUF4393	PF14337.1	gi|15921071|ref|NP_376740.1|	-	0.0086	15.5	0.2	0.01	15.3	0.1	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4393)
HTH_36	PF13730.1	gi|15921071|ref|NP_376740.1|	-	0.0089	16.1	0.1	0.016	15.3	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
LexA_DNA_bind	PF01726.11	gi|15921071|ref|NP_376740.1|	-	0.01	15.4	0.1	0.02	14.4	0.1	1.6	1	1	0	1	1	1	0	LexA	DNA	binding	domain
EAP30	PF04157.11	gi|15921071|ref|NP_376740.1|	-	0.019	14.1	1.0	0.031	13.4	0.1	1.7	2	0	0	2	2	2	0	EAP30/Vps36	family
RuvB_C	PF05491.8	gi|15921071|ref|NP_376740.1|	-	0.019	14.5	0.1	0.035	13.7	0.1	1.3	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	ruvB	C-terminus
HTH_38	PF13936.1	gi|15921071|ref|NP_376740.1|	-	0.033	13.7	0.0	0.055	13.0	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
FeoC	PF09012.5	gi|15921071|ref|NP_376740.1|	-	0.036	13.7	0.3	0.061	13.0	0.2	1.3	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
RPA_C	PF08784.6	gi|15921071|ref|NP_376740.1|	-	0.038	14.3	0.0	0.056	13.8	0.0	1.3	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
Sulfolobus_pRN	PF05584.6	gi|15921071|ref|NP_376740.1|	-	0.071	13.0	0.1	0.12	12.3	0.0	1.4	1	0	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
Cullin_Nedd8	PF10557.4	gi|15921071|ref|NP_376740.1|	-	0.086	12.6	0.1	0.15	11.9	0.1	1.4	1	0	0	1	1	1	0	Cullin	protein	neddylation	domain
HTH_19	PF12844.2	gi|15921071|ref|NP_376740.1|	-	0.09	12.8	0.2	0.22	11.5	0.1	1.9	1	1	1	2	2	2	0	Helix-turn-helix	domain
HxlR	PF01638.12	gi|15921071|ref|NP_376740.1|	-	0.14	11.8	0.2	0.2	11.2	0.1	1.4	1	1	0	1	1	1	0	HxlR-like	helix-turn-helix
KaiC	PF06745.8	gi|15921072|ref|NP_376741.1|	-	3.6e-18	65.5	0.3	5.1e-18	65.0	0.2	1.2	1	0	0	1	1	1	1	KaiC
Arch_ATPase	PF01637.13	gi|15921072|ref|NP_376741.1|	-	1.4e-08	34.7	0.2	1.7e-08	34.4	0.1	1.1	1	0	0	1	1	1	1	Archaeal	ATPase
AAA_25	PF13481.1	gi|15921072|ref|NP_376741.1|	-	6.7e-06	25.6	0.0	1.3e-05	24.7	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
GvpD	PF07088.6	gi|15921072|ref|NP_376741.1|	-	3.9e-05	22.1	2.1	7e-05	21.3	1.4	1.3	1	1	0	1	1	1	1	GvpD	gas	vesicle	protein
ATP-synt_ab	PF00006.20	gi|15921072|ref|NP_376741.1|	-	0.00053	19.5	0.1	0.0071	15.8	0.0	2.4	2	1	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_14	PF13173.1	gi|15921072|ref|NP_376741.1|	-	0.0027	17.6	0.2	0.0059	16.5	0.1	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_24	PF13479.1	gi|15921072|ref|NP_376741.1|	-	0.0059	16.2	0.0	0.011	15.3	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|15921072|ref|NP_376741.1|	-	0.006	16.0	0.1	0.02	14.4	0.0	1.8	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
Bac_DnaA	PF00308.13	gi|15921072|ref|NP_376741.1|	-	0.0062	16.2	1.0	0.14	11.8	0.0	2.1	1	1	1	2	2	2	1	Bacterial	dnaA	protein
AAA_10	PF12846.2	gi|15921072|ref|NP_376741.1|	-	0.0081	15.6	0.2	0.011	15.1	0.1	1.3	1	1	0	1	1	1	1	AAA-like	domain
ABC_tran	PF00005.22	gi|15921072|ref|NP_376741.1|	-	0.012	15.9	0.0	0.02	15.1	0.0	1.5	1	0	0	1	1	1	0	ABC	transporter
AAA_17	PF13207.1	gi|15921072|ref|NP_376741.1|	-	0.014	16.2	0.0	0.022	15.5	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_16	PF13191.1	gi|15921072|ref|NP_376741.1|	-	0.014	15.3	0.0	0.021	14.8	0.0	1.2	1	0	0	1	1	1	0	AAA	ATPase	domain
NACHT	PF05729.7	gi|15921072|ref|NP_376741.1|	-	0.021	14.5	0.7	0.28	10.8	0.5	2.1	1	1	0	1	1	1	0	NACHT	domain
AAA_22	PF13401.1	gi|15921072|ref|NP_376741.1|	-	0.075	13.1	0.3	0.14	12.2	0.2	1.7	1	1	0	1	1	1	0	AAA	domain
TK	PF00265.13	gi|15921072|ref|NP_376741.1|	-	0.1	12.1	0.0	0.14	11.6	0.0	1.4	1	0	0	1	1	1	0	Thymidine	kinase
SMC_N	PF02463.14	gi|15921072|ref|NP_376741.1|	-	0.13	11.4	0.0	0.3	10.3	0.0	1.5	1	0	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
Antitoxin-MazE	PF04014.13	gi|15921073|ref|NP_376742.1|	-	3.3e-15	55.4	0.3	3.3e-15	55.4	0.2	1.4	2	0	0	2	2	2	1	Antidote-toxin	recognition	MazE
SH3_2	PF07653.12	gi|15921073|ref|NP_376742.1|	-	0.024	14.1	0.0	0.029	13.8	0.0	1.4	1	0	0	1	1	1	0	Variant	SH3	domain
AbrB-like	PF14250.1	gi|15921073|ref|NP_376742.1|	-	0.047	13.5	0.0	0.082	12.8	0.0	1.4	1	0	0	1	1	1	0	AbrB-like	transcriptional	regulator
DUF104	PF01954.11	gi|15921073|ref|NP_376742.1|	-	0.049	13.6	2.1	0.077	13.0	1.4	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF104
AAA_9	PF12781.2	gi|15921073|ref|NP_376742.1|	-	0.076	11.8	0.0	0.08	11.7	0.0	1.1	1	0	0	1	1	1	0	ATP-binding	dynein	motor	region	D5
PIN	PF01850.16	gi|15921074|ref|NP_376743.1|	-	6.6e-18	65.1	4.1	7.5e-18	65.0	2.8	1.0	1	0	0	1	1	1	1	PIN	domain
PIN_4	PF13638.1	gi|15921074|ref|NP_376743.1|	-	0.00064	19.8	1.6	0.0019	18.3	1.1	1.7	1	1	0	1	1	1	1	PIN	domain
PIN_3	PF13470.1	gi|15921074|ref|NP_376743.1|	-	0.024	15.2	0.4	0.043	14.4	0.3	1.4	1	1	0	1	1	1	0	PIN	domain
Peripla_BP_2	PF01497.13	gi|15921075|ref|NP_376744.1|	-	5.4e-21	74.8	0.0	7.2e-21	74.4	0.0	1.1	1	0	0	1	1	1	1	Periplasmic	binding	protein
OppC_N	PF12911.2	gi|15921075|ref|NP_376744.1|	-	0.06	12.7	0.4	0.15	11.4	0.3	1.7	1	0	0	1	1	1	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
GET2	PF08690.5	gi|15921075|ref|NP_376744.1|	-	0.23	10.6	3.7	0.27	10.4	0.7	2.0	2	0	0	2	2	2	0	GET	complex	subunit	GET2
TarH	PF02203.10	gi|15921075|ref|NP_376744.1|	-	0.69	9.7	2.3	1.4	8.7	0.7	1.9	2	0	0	2	2	2	0	Tar	ligand	binding	domain	homologue
4HB_MCP_1	PF12729.2	gi|15921075|ref|NP_376744.1|	-	2.7	7.2	6.2	0.87	8.9	1.4	2.0	2	0	0	2	2	2	0	Four	helix	bundle	sensory	module	for	signal	transduction
FecCD	PF01032.13	gi|15921076|ref|NP_376745.1|	-	1.3e-67	227.8	33.0	1.5e-67	227.6	22.9	1.0	1	0	0	1	1	1	1	FecCD	transport	family
ABC-3	PF00950.12	gi|15921076|ref|NP_376745.1|	-	4.8e-10	39.1	25.0	6.6e-10	38.7	17.3	1.2	1	0	0	1	1	1	1	ABC	3	transport	family
ABC_tran	PF00005.22	gi|15921077|ref|NP_376746.1|	-	3.5e-16	59.7	0.2	2.5e-15	56.9	0.1	2.0	1	1	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|15921077|ref|NP_376746.1|	-	5.1e-16	59.4	6.9	6.6e-09	36.1	1.2	2.2	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|15921077|ref|NP_376746.1|	-	5.7e-12	45.3	5.0	8.3e-07	28.4	0.4	2.1	1	1	1	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|15921077|ref|NP_376746.1|	-	2.1e-10	41.2	2.1	3.1e-10	40.7	1.5	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|15921077|ref|NP_376746.1|	-	6.3e-08	32.0	6.2	0.00025	20.2	1.7	2.3	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA_33	PF13671.1	gi|15921077|ref|NP_376746.1|	-	3.1e-05	23.8	0.0	7.6e-05	22.6	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_13	PF13166.1	gi|15921077|ref|NP_376746.1|	-	5.6e-05	21.8	0.2	5.6e-05	21.8	0.1	2.0	2	1	0	2	2	2	1	AAA	domain
AAA_29	PF13555.1	gi|15921077|ref|NP_376746.1|	-	0.00034	20.0	0.1	0.00073	19.0	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
Arch_ATPase	PF01637.13	gi|15921077|ref|NP_376746.1|	-	0.00036	20.3	0.4	0.00048	19.9	0.2	1.5	1	1	0	1	1	1	1	Archaeal	ATPase
AAA_18	PF13238.1	gi|15921077|ref|NP_376746.1|	-	0.0012	19.1	0.5	0.0025	18.1	0.3	1.5	1	1	0	1	1	1	1	AAA	domain
T2SE	PF00437.15	gi|15921077|ref|NP_376746.1|	-	0.0014	17.6	0.2	0.0028	16.5	0.0	1.5	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
FtsK_SpoIIIE	PF01580.13	gi|15921077|ref|NP_376746.1|	-	0.0021	17.5	0.3	0.0041	16.6	0.2	1.4	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
AAA_10	PF12846.2	gi|15921077|ref|NP_376746.1|	-	0.0038	16.6	0.1	0.0048	16.3	0.1	1.4	1	1	0	1	1	1	1	AAA-like	domain
cobW	PF02492.14	gi|15921077|ref|NP_376746.1|	-	0.0038	16.6	0.8	0.03	13.7	0.1	2.1	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_22	PF13401.1	gi|15921077|ref|NP_376746.1|	-	0.0039	17.3	0.1	0.0063	16.6	0.1	1.6	1	1	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|15921077|ref|NP_376746.1|	-	0.0039	16.3	0.1	0.0063	15.7	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
NTPase_1	PF03266.10	gi|15921077|ref|NP_376746.1|	-	0.0082	15.8	1.6	0.82	9.3	0.0	2.2	2	0	0	2	2	2	1	NTPase
AAA_5	PF07728.9	gi|15921077|ref|NP_376746.1|	-	0.01	15.5	0.2	2.2	8.0	0.0	2.3	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
MobB	PF03205.9	gi|15921077|ref|NP_376746.1|	-	0.012	15.2	0.3	0.039	13.6	0.0	1.9	2	1	1	3	3	3	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ABC_ATPase	PF09818.4	gi|15921077|ref|NP_376746.1|	-	0.015	13.9	1.0	0.12	10.8	0.2	2.0	2	0	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
NACHT	PF05729.7	gi|15921077|ref|NP_376746.1|	-	0.015	14.9	0.0	0.027	14.1	0.0	1.3	1	0	0	1	1	1	0	NACHT	domain
AAA_17	PF13207.1	gi|15921077|ref|NP_376746.1|	-	0.015	16.0	1.5	0.056	14.2	1.0	2.0	1	1	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|15921077|ref|NP_376746.1|	-	0.016	15.4	0.1	0.029	14.5	0.1	1.7	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_14	PF13173.1	gi|15921077|ref|NP_376746.1|	-	0.018	14.9	1.0	0.062	13.2	0.7	2.1	1	1	0	1	1	1	0	AAA	domain
AAA_24	PF13479.1	gi|15921077|ref|NP_376746.1|	-	0.025	14.1	0.1	0.045	13.3	0.1	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_16	PF13191.1	gi|15921077|ref|NP_376746.1|	-	0.026	14.5	0.0	0.044	13.7	0.0	1.5	1	1	0	1	1	1	0	AAA	ATPase	domain
SbcCD_C	PF13558.1	gi|15921077|ref|NP_376746.1|	-	0.026	14.4	0.0	0.5	10.3	0.0	2.2	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_11	PF13086.1	gi|15921077|ref|NP_376746.1|	-	0.03	13.9	0.0	0.1	12.1	0.0	1.6	1	1	0	2	2	2	0	AAA	domain
Adeno_IVa2	PF02456.10	gi|15921077|ref|NP_376746.1|	-	0.035	12.7	0.2	0.073	11.7	0.0	1.5	2	0	0	2	2	2	0	Adenovirus	IVa2	protein
DUF3584	PF12128.3	gi|15921077|ref|NP_376746.1|	-	0.064	10.5	1.0	0.087	10.1	0.7	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
RNA_helicase	PF00910.17	gi|15921077|ref|NP_376746.1|	-	0.078	13.1	0.1	0.5	10.5	0.0	2.1	2	0	0	2	2	2	0	RNA	helicase
Miro	PF08477.8	gi|15921077|ref|NP_376746.1|	-	0.084	13.3	0.0	0.15	12.5	0.0	1.4	1	0	0	1	1	1	0	Miro-like	protein
Mg_chelatase	PF01078.16	gi|15921077|ref|NP_376746.1|	-	0.091	11.9	0.0	0.13	11.3	0.0	1.2	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
IstB_IS21	PF01695.12	gi|15921077|ref|NP_376746.1|	-	0.098	12.0	1.3	2.6	7.4	0.1	2.1	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA_19	PF13245.1	gi|15921077|ref|NP_376746.1|	-	0.12	12.1	0.0	0.22	11.2	0.0	1.4	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_25	PF13481.1	gi|15921077|ref|NP_376746.1|	-	0.17	11.2	0.0	0.38	10.1	0.0	1.5	2	0	0	2	2	2	0	AAA	domain
MutS_V	PF00488.16	gi|15921077|ref|NP_376746.1|	-	0.23	10.8	1.0	0.38	10.1	0.1	1.7	2	1	0	2	2	2	0	MutS	domain	V
SpoIIID	PF12116.3	gi|15921078|ref|NP_376747.1|	-	0.01	15.7	0.2	0.014	15.2	0.2	1.2	1	0	0	1	1	1	0	Stage	III	sporulation	protein	D
HTH_23	PF13384.1	gi|15921078|ref|NP_376747.1|	-	0.02	14.5	0.0	0.036	13.7	0.0	1.4	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_psq	PF05225.11	gi|15921078|ref|NP_376747.1|	-	0.043	13.3	0.0	0.068	12.7	0.0	1.3	1	0	0	1	1	1	0	helix-turn-helix,	Psq	domain
HlyD_2	PF12700.2	gi|15921078|ref|NP_376747.1|	-	0.05	12.7	0.0	0.054	12.6	0.0	1.0	1	0	0	1	1	1	0	HlyD	family	secretion	protein
DUF2073	PF09846.4	gi|15921078|ref|NP_376747.1|	-	0.07	12.7	0.1	0.099	12.3	0.1	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2073)
HTH_28	PF13518.1	gi|15921078|ref|NP_376747.1|	-	0.13	12.3	0.1	0.2	11.7	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
MS_channel	PF00924.13	gi|15921079|ref|NP_376748.1|	-	5.4e-25	87.9	2.7	5.4e-25	87.9	1.9	2.0	2	0	0	2	2	2	1	Mechanosensitive	ion	channel
DUF4064	PF13273.1	gi|15921080|ref|NP_376749.1|	-	0.29	11.2	10.1	0.045	13.8	1.1	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4064)
PaREP1	PF05942.6	gi|15921081|ref|NP_376750.1|	-	2.5e-26	91.7	0.9	4e-26	91.1	0.2	1.6	2	0	0	2	2	2	1	Archaeal	PaREP1/PaREP8	family
Sigma70_r1_1	PF03979.9	gi|15921081|ref|NP_376750.1|	-	0.044	13.7	0.2	3	7.8	0.0	2.5	2	0	0	2	2	2	0	Sigma-70	factor,	region	1.1
DUF772	PF05598.6	gi|15921082|ref|NP_376751.1|	-	1.7e-05	24.5	0.1	4.4e-05	23.3	0.1	1.7	1	1	0	1	1	1	1	Transposase	domain	(DUF772)
DDE_Tnp_1	PF01609.16	gi|15921082|ref|NP_376751.1|	-	0.049	13.1	0.0	1.7	8.1	0.0	2.3	1	1	1	2	2	2	0	Transposase	DDE	domain
PIN	PF01850.16	gi|15921083|ref|NP_376752.1|	-	0.041	14.2	0.5	0.16	12.3	0.3	2.0	1	1	0	1	1	1	0	PIN	domain
MAGE	PF01454.14	gi|15921084|ref|NP_376753.1|	-	0.012	14.9	0.2	0.028	13.7	0.1	1.7	1	1	0	1	1	1	0	MAGE	family
TrmB	PF01978.14	gi|15921084|ref|NP_376753.1|	-	0.012	15.2	0.4	0.047	13.3	0.1	2.0	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
AAA_11	PF13086.1	gi|15921084|ref|NP_376753.1|	-	0.018	14.6	0.2	0.02	14.4	0.1	1.1	1	0	0	1	1	1	0	AAA	domain
Phasin	PF05597.6	gi|15921084|ref|NP_376753.1|	-	0.029	14.1	0.3	0.051	13.3	0.2	1.4	1	0	0	1	1	1	0	Poly(hydroxyalcanoate)	granule	associated	protein	(phasin)
DUF1803	PF08820.5	gi|15921084|ref|NP_376753.1|	-	0.031	13.9	0.2	0.068	12.8	0.1	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1803)
DUF4423	PF14394.1	gi|15921084|ref|NP_376753.1|	-	0.042	13.3	0.2	0.077	12.5	0.2	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
RQC	PF09382.5	gi|15921084|ref|NP_376753.1|	-	0.043	13.5	0.2	1.4	8.6	0.0	2.9	2	1	2	4	4	4	0	RQC	domain
DsrD	PF08679.6	gi|15921084|ref|NP_376753.1|	-	0.051	13.5	1.4	0.051	13.5	1.0	1.8	2	0	0	2	2	2	0	Dissimilatory	sulfite	reductase	D	(DsrD)
RPA_C	PF08784.6	gi|15921084|ref|NP_376753.1|	-	0.063	13.6	0.2	17	5.8	0.0	2.7	3	0	0	3	3	3	0	Replication	protein	A	C	terminal
DUF3349	PF11829.3	gi|15921084|ref|NP_376753.1|	-	0.087	13.2	0.1	10	6.6	0.0	2.9	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3349)
HemN_C	PF06969.11	gi|15921084|ref|NP_376753.1|	-	0.16	12.0	1.4	4.7	7.3	0.0	3.0	3	0	0	3	3	3	0	HemN	C-terminal	domain
MecA_N	PF05223.6	gi|15921084|ref|NP_376753.1|	-	0.55	10.3	3.5	0.89	9.6	1.9	1.7	1	1	0	1	1	1	0	NTF2-like	N-terminal	transpeptidase	domain
Chlam_vir	PF05475.6	gi|15921084|ref|NP_376753.1|	-	2.3	7.2	4.4	0.64	9.0	1.2	1.4	2	0	0	2	2	2	0	Chlamydia	virulence	protein	PGP3-D
AAA_16	PF13191.1	gi|15921085|ref|NP_376754.1|	-	4.5e-07	30.0	0.0	1.2e-06	28.6	0.0	1.6	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|15921085|ref|NP_376754.1|	-	5e-07	29.9	2.2	1.6e-05	25.0	0.1	3.1	1	1	1	2	2	2	1	AAA	domain
AAA_14	PF13173.1	gi|15921085|ref|NP_376754.1|	-	1.2e-05	25.1	17.6	0.00047	20.0	0.0	4.4	2	2	1	4	4	4	2	AAA	domain
AAA	PF00004.24	gi|15921085|ref|NP_376754.1|	-	2e-05	24.8	0.4	0.0012	19.0	0.0	3.2	3	1	0	3	3	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
NACHT	PF05729.7	gi|15921085|ref|NP_376754.1|	-	0.00016	21.3	0.0	0.00091	18.9	0.0	2.1	1	1	0	1	1	1	1	NACHT	domain
NB-ARC	PF00931.17	gi|15921085|ref|NP_376754.1|	-	0.00052	18.9	1.4	0.0012	17.7	0.0	2.3	2	1	1	3	3	3	1	NB-ARC	domain
AAA_11	PF13086.1	gi|15921085|ref|NP_376754.1|	-	0.00079	19.0	1.8	0.0016	18.0	1.2	1.6	1	1	0	1	1	1	1	AAA	domain
cobW	PF02492.14	gi|15921085|ref|NP_376754.1|	-	0.0012	18.3	0.0	0.0027	17.1	0.0	1.6	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
ABC_tran	PF00005.22	gi|15921085|ref|NP_376754.1|	-	0.0017	18.6	0.8	0.0046	17.2	0.1	2.3	2	1	0	2	2	2	1	ABC	transporter
ArgK	PF03308.11	gi|15921085|ref|NP_376754.1|	-	0.002	16.9	0.1	0.0059	15.4	0.0	1.7	2	0	0	2	2	2	1	ArgK	protein
AAA_10	PF12846.2	gi|15921085|ref|NP_376754.1|	-	0.0031	17.0	4.4	0.18	11.2	3.0	2.5	1	1	0	1	1	1	1	AAA-like	domain
AAA_30	PF13604.1	gi|15921085|ref|NP_376754.1|	-	0.0039	16.8	0.0	0.0098	15.4	0.0	1.6	2	0	0	2	2	1	1	AAA	domain
MobB	PF03205.9	gi|15921085|ref|NP_376754.1|	-	0.0047	16.6	1.6	0.053	13.2	0.0	2.5	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
TrwB_AAD_bind	PF10412.4	gi|15921085|ref|NP_376754.1|	-	0.007	15.0	0.0	0.017	13.7	0.0	1.6	1	0	0	1	1	1	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
T2SE	PF00437.15	gi|15921085|ref|NP_376754.1|	-	0.008	15.1	0.0	0.026	13.4	0.0	1.8	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
AAA_17	PF13207.1	gi|15921085|ref|NP_376754.1|	-	0.0084	16.9	9.1	1.6	9.5	6.2	3.4	1	1	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|15921085|ref|NP_376754.1|	-	0.01	15.5	0.0	0.019	14.7	0.0	1.4	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_29	PF13555.1	gi|15921085|ref|NP_376754.1|	-	0.012	15.1	0.1	0.025	14.0	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
DUF258	PF03193.11	gi|15921085|ref|NP_376754.1|	-	0.013	14.6	0.0	0.029	13.5	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
FtsK_SpoIIIE	PF01580.13	gi|15921085|ref|NP_376754.1|	-	0.017	14.6	0.0	0.043	13.2	0.0	1.7	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
ATP-synt_ab	PF00006.20	gi|15921085|ref|NP_376754.1|	-	0.029	13.8	0.0	0.037	13.5	0.0	1.3	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_33	PF13671.1	gi|15921085|ref|NP_376754.1|	-	0.056	13.3	0.0	0.12	12.2	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
DUF2334	PF10096.4	gi|15921085|ref|NP_376754.1|	-	0.059	12.7	5.5	0.074	12.4	0.8	2.7	2	1	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2334)
NTPase_1	PF03266.10	gi|15921085|ref|NP_376754.1|	-	0.062	13.0	0.1	0.062	13.0	0.0	3.1	3	1	0	3	3	3	0	NTPase
AAA_25	PF13481.1	gi|15921085|ref|NP_376754.1|	-	0.089	12.1	0.0	0.61	9.4	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
AAA_5	PF07728.9	gi|15921085|ref|NP_376754.1|	-	0.14	11.8	1.5	2.8	7.6	0.0	3.2	2	2	2	4	4	4	0	AAA	domain	(dynein-related	subfamily)
MMR_HSR1	PF01926.18	gi|15921085|ref|NP_376754.1|	-	0.28	11.1	0.0	0.28	11.1	0.0	3.1	3	2	0	3	3	3	0	50S	ribosome-binding	GTPase
AAA_18	PF13238.1	gi|15921085|ref|NP_376754.1|	-	0.34	11.2	11.5	0.077	13.2	0.6	3.7	1	1	2	3	3	3	0	AAA	domain
DapH_N	PF08503.5	gi|15921085|ref|NP_376754.1|	-	0.95	9.6	12.1	7.8	6.7	3.0	3.7	2	1	1	3	3	3	0	Tetrahydrodipicolinate	succinyltransferase	N-terminal
MRC1	PF09444.5	gi|15921085|ref|NP_376754.1|	-	3.9	7.7	9.3	0.5	10.6	0.8	2.7	2	1	0	2	2	2	0	MRC1-like	domain
AA_permease_2	PF13520.1	gi|15921087|ref|NP_376756.1|	-	9.6e-42	142.9	56.9	2.6e-41	141.5	39.4	1.7	1	1	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|15921087|ref|NP_376756.1|	-	4.6e-32	110.9	40.2	4.6e-32	110.9	27.9	2.0	1	1	1	2	2	2	1	Amino	acid	permease
Spore_permease	PF03845.8	gi|15921087|ref|NP_376756.1|	-	1.2e-13	50.4	32.2	1.2e-13	50.4	22.3	2.2	1	1	0	2	2	2	1	Spore	germination	protein
AA_permease_C	PF13906.1	gi|15921087|ref|NP_376756.1|	-	0.069	13.0	0.5	0.069	13.0	0.3	3.8	6	0	0	6	6	6	0	C-terminus	of	AA_permease
TMEM237	PF15383.1	gi|15921087|ref|NP_376756.1|	-	1.9	7.5	13.7	3.9	6.5	2.4	2.6	2	0	0	2	2	2	0	Transmembrane	protein	237
tRNA_m1G_MT	PF01746.16	gi|15921088|ref|NP_376757.1|	-	4e-13	49.3	0.4	1.9e-12	47.1	0.1	1.9	1	1	1	2	2	2	1	tRNA	(Guanine-1)-methyltransferase
DUF4030	PF13222.1	gi|15921088|ref|NP_376757.1|	-	0.061	13.0	0.3	0.14	11.8	0.2	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4030)
DEDD_Tnp_IS110	PF01548.12	gi|15921089|ref|NP_376758.1|	-	1.2e-35	122.2	0.0	2.5e-35	121.2	0.0	1.5	2	0	0	2	2	2	1	Transposase
Transposase_20	PF02371.11	gi|15921089|ref|NP_376758.1|	-	2.5e-24	85.2	0.1	4.8e-24	84.2	0.1	1.4	1	0	0	1	1	1	1	Transposase	IS116/IS110/IS902	family
HHH	PF00633.18	gi|15921089|ref|NP_376758.1|	-	0.01	15.4	0.2	0.03	14.0	0.1	1.8	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
HHH_5	PF14520.1	gi|15921089|ref|NP_376758.1|	-	0.011	15.9	0.2	0.041	14.0	0.1	2.1	1	1	0	1	1	1	0	Helix-hairpin-helix	domain
Peptidase_S48	PF03574.10	gi|15921089|ref|NP_376758.1|	-	0.028	14.3	0.3	0.059	13.3	0.2	1.5	1	0	0	1	1	1	0	Peptidase	family	S48
FliT	PF05400.8	gi|15921089|ref|NP_376758.1|	-	0.13	12.7	5.9	0.14	12.5	3.1	1.8	1	1	0	1	1	1	0	Flagellar	protein	FliT
FlgN	PF05130.7	gi|15921089|ref|NP_376758.1|	-	0.16	12.2	11.3	0.1	12.8	5.8	2.1	2	1	1	3	3	3	0	FlgN	protein
SF3a60_bindingd	PF12108.3	gi|15921089|ref|NP_376758.1|	-	0.39	10.2	1.9	0.77	9.3	0.3	2.3	2	0	0	2	2	2	0	Splicing	factor	SF3a60	binding	domain
PspB	PF06667.7	gi|15921089|ref|NP_376758.1|	-	1.1	9.2	4.0	4.3	7.3	1.0	2.5	2	1	1	3	3	3	0	Phage	shock	protein	B
DDE_Tnp_IS240	PF13610.1	gi|15921092|ref|NP_376761.1|	-	1.2e-05	25.2	0.5	1.7e-05	24.8	0.3	1.2	1	0	0	1	1	1	1	DDE	domain
DDE_Tnp_IS66	PF03050.9	gi|15921092|ref|NP_376761.1|	-	0.00084	18.6	0.0	0.0014	17.8	0.0	1.3	1	1	0	1	1	1	1	Transposase	IS66	family
DNA_primase_S	PF01896.14	gi|15921092|ref|NP_376761.1|	-	0.016	15.0	0.1	0.023	14.5	0.1	1.4	1	0	0	1	1	1	0	Eukaryotic	and	archaeal	DNA	primase	small	subunit
AA_permease_2	PF13520.1	gi|15921093|ref|NP_376762.1|	-	3.4e-18	65.4	52.6	4.5e-18	64.9	36.5	1.2	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|15921093|ref|NP_376762.1|	-	8.2e-18	63.9	50.3	4.1e-17	61.6	34.8	2.3	1	1	0	1	1	1	1	Amino	acid	permease
DUF788	PF05620.6	gi|15921093|ref|NP_376762.1|	-	3.9	7.3	7.3	1	9.2	1.2	2.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF788)
DUF4199	PF13858.1	gi|15921094|ref|NP_376763.1|	-	0.021	14.7	1.8	0.021	14.7	1.2	2.4	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF4199)
COX15-CtaA	PF02628.10	gi|15921094|ref|NP_376763.1|	-	0.023	13.5	0.8	0.029	13.2	0.6	1.1	1	0	0	1	1	1	0	Cytochrome	oxidase	assembly	protein
Abi	PF02517.11	gi|15921094|ref|NP_376763.1|	-	0.044	13.9	0.5	0.044	13.9	0.4	2.3	1	1	1	2	2	2	0	CAAX	protease	self-immunity
DUF2422	PF10337.4	gi|15921094|ref|NP_376763.1|	-	0.06	12.1	0.2	0.076	11.7	0.1	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2422)
cIII	PF08134.6	gi|15921094|ref|NP_376763.1|	-	0.16	11.6	0.0	0.24	11.0	0.0	1.3	1	0	0	1	1	1	0	cIII	protein	family
Wzy_C	PF04932.10	gi|15921094|ref|NP_376763.1|	-	2.1	8.1	8.1	2.9	7.6	3.6	2.1	2	0	0	2	2	2	0	O-Antigen	ligase
PrgI	PF12666.2	gi|15921094|ref|NP_376763.1|	-	4.5	7.4	5.9	1.5	9.0	1.9	1.8	2	0	0	2	2	2	0	PrgI	family	protein
DsbD_2	PF13386.1	gi|15921094|ref|NP_376763.1|	-	4.6	6.9	10.1	1.1	8.9	2.5	2.1	1	1	0	2	2	2	0	Cytochrome	C	biogenesis	protein	transmembrane	region
Sugar_tr	PF00083.19	gi|15921095|ref|NP_376764.1|	-	2.4e-28	98.9	34.0	1e-21	77.0	8.1	3.3	1	1	2	3	3	3	3	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|15921095|ref|NP_376764.1|	-	3.9e-28	98.1	43.6	5.1e-17	61.6	15.0	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
GATase	PF00117.23	gi|15921096|ref|NP_376765.1|	-	6.2e-19	68.1	0.0	8e-19	67.8	0.0	1.1	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|15921096|ref|NP_376765.1|	-	1.4e-07	31.1	0.0	4.1e-07	29.6	0.0	1.8	2	0	0	2	2	2	1	Peptidase	C26
UPF0180	PF03698.8	gi|15921096|ref|NP_376765.1|	-	0.0024	17.6	0.0	0.0043	16.8	0.0	1.3	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0180)
HTS	PF04204.11	gi|15921096|ref|NP_376765.1|	-	0.01	14.5	0.0	0.012	14.3	0.0	1.2	1	0	0	1	1	1	0	Homoserine	O-succinyltransferase
DJ-1_PfpI	PF01965.19	gi|15921096|ref|NP_376765.1|	-	0.033	13.6	0.0	0.06	12.8	0.0	1.4	1	0	0	1	1	1	0	DJ-1/PfpI	family
GATase_3	PF07685.9	gi|15921096|ref|NP_376765.1|	-	0.037	13.6	0.0	0.066	12.7	0.0	1.5	1	0	0	1	1	1	0	CobB/CobQ-like	glutamine	amidotransferase	domain
SNO	PF01174.14	gi|15921096|ref|NP_376765.1|	-	0.079	12.5	0.0	0.097	12.2	0.0	1.4	1	1	0	1	1	1	0	SNO	glutamine	amidotransferase	family
AAA_14	PF13173.1	gi|15921097|ref|NP_376766.1|	-	1.1e-22	80.2	0.1	3e-22	78.8	0.1	1.7	1	0	0	1	1	1	1	AAA	domain
DUF4143	PF13635.1	gi|15921097|ref|NP_376766.1|	-	4.1e-11	42.9	0.5	1.6e-10	40.9	0.1	2.0	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4143)
Arch_ATPase	PF01637.13	gi|15921097|ref|NP_376766.1|	-	1.6e-06	28.0	0.9	5.4e-06	26.2	0.1	2.3	2	0	0	2	2	2	1	Archaeal	ATPase
AAA	PF00004.24	gi|15921097|ref|NP_376766.1|	-	0.039	14.1	0.0	0.073	13.2	0.0	1.4	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ATP-synt_ab	PF00006.20	gi|15921097|ref|NP_376766.1|	-	0.094	12.2	0.0	0.15	11.5	0.0	1.4	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
PaREP1	PF05942.6	gi|15921099|ref|NP_376768.1|	-	1.8e-18	66.4	0.0	2.6e-18	65.9	0.0	1.3	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
DUF871	PF05913.6	gi|15921100|ref|NP_376769.1|	-	4.2e-73	246.2	0.2	5.1e-73	245.9	0.1	1.0	1	0	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF871)
PIG-L	PF02585.12	gi|15921101|ref|NP_376770.1|	-	1.7e-28	99.7	0.0	2.3e-28	99.2	0.0	1.2	1	0	0	1	1	1	1	GlcNAc-PI	de-N-acetylase
DUF608	PF04685.8	gi|15921102|ref|NP_376771.1|	-	2.9e-90	302.6	0.0	4.1e-90	302.1	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF608
GBA2_N	PF12215.3	gi|15921102|ref|NP_376771.1|	-	1.2e-61	208.5	0.1	1.6e-61	208.1	0.0	1.2	1	0	0	1	1	1	1	beta-Glucocerebrosidase	2	N	terminal
Bac_rhamnosid	PF05592.6	gi|15921102|ref|NP_376771.1|	-	1.4e-06	26.8	0.0	2.5e-06	26.0	0.0	1.3	1	0	0	1	1	1	1	Bacterial	alpha-L-rhamnosidase
GDE_C	PF06202.9	gi|15921102|ref|NP_376771.1|	-	0.00032	19.5	0.0	0.011	14.4	0.0	2.4	1	1	0	1	1	1	1	Amylo-alpha-1,6-glucosidase
Glyco_hydro_52	PF03512.8	gi|15921102|ref|NP_376771.1|	-	0.0029	16.2	0.0	0.0046	15.6	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	hydrolase	family	52
EamA	PF00892.15	gi|15921103|ref|NP_376772.1|	-	0.02	14.9	2.0	0.031	14.3	1.4	1.3	1	0	0	1	1	1	0	EamA-like	transporter	family
DUF1129	PF06570.6	gi|15921103|ref|NP_376772.1|	-	0.099	11.9	3.3	0.052	12.8	0.6	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1129)
Bestrophin	PF01062.16	gi|15921103|ref|NP_376772.1|	-	0.16	10.9	2.7	0.25	10.2	1.9	1.3	1	0	0	1	1	1	0	Bestrophin,	RFP-TM,	chloride	channel
Methyltransf_11	PF08241.7	gi|15921104|ref|NP_376773.1|	-	5.4e-13	49.2	0.0	7.4e-13	48.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|15921104|ref|NP_376773.1|	-	6.4e-05	22.5	0.3	0.00014	21.5	0.2	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|15921104|ref|NP_376773.1|	-	7e-05	22.6	0.0	9.4e-05	22.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|15921104|ref|NP_376773.1|	-	0.00044	20.7	0.0	0.0016	18.9	0.0	1.8	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|15921104|ref|NP_376773.1|	-	0.00069	19.9	0.0	0.0013	19.0	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|15921104|ref|NP_376773.1|	-	0.0039	16.3	0.3	0.0073	15.4	0.2	1.5	1	1	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_8	PF05148.10	gi|15921104|ref|NP_376773.1|	-	0.0039	16.8	0.1	0.011	15.4	0.1	1.7	1	1	0	1	1	1	1	Hypothetical	methyltransferase
Methyltransf_26	PF13659.1	gi|15921104|ref|NP_376773.1|	-	0.008	16.2	0.0	0.017	15.1	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|15921104|ref|NP_376773.1|	-	0.0084	16.5	0.0	0.028	14.9	0.0	1.8	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_24	PF13578.1	gi|15921104|ref|NP_376773.1|	-	0.039	14.7	0.0	0.063	14.1	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
FMN_red	PF03358.10	gi|15921105|ref|NP_376774.1|	-	2.5e-15	56.2	0.0	3.5e-15	55.8	0.0	1.2	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.12	gi|15921105|ref|NP_376774.1|	-	0.00056	19.4	0.0	0.0013	18.2	0.0	1.7	2	0	0	2	2	2	1	Flavodoxin-like	fold
Flavodoxin_5	PF12724.2	gi|15921105|ref|NP_376774.1|	-	0.0035	17.3	0.0	0.0089	16.0	0.0	1.6	1	1	1	2	2	2	1	Flavodoxin	domain
Radical_SAM	PF04055.16	gi|15921106|ref|NP_376775.1|	-	3e-20	73.0	0.1	1.3e-19	70.9	0.0	2.0	2	0	0	2	2	2	1	Radical	SAM	superfamily
B12-binding	PF02310.14	gi|15921106|ref|NP_376775.1|	-	0.00011	22.0	0.0	0.00024	20.9	0.0	1.6	1	0	0	1	1	1	1	B12	binding	domain
TMP-TENI	PF02581.12	gi|15921106|ref|NP_376775.1|	-	0.033	13.2	0.0	4.1	6.4	0.0	2.4	2	0	0	2	2	2	0	Thiamine	monophosphate	synthase/TENI
UPF0180	PF03698.8	gi|15921106|ref|NP_376775.1|	-	0.051	13.4	0.0	0.11	12.3	0.0	1.5	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0180)
Lactamase_B	PF00753.22	gi|15921107|ref|NP_376776.1|	-	3.6e-23	82.2	0.1	4.5e-23	81.9	0.0	1.1	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|15921107|ref|NP_376776.1|	-	3.2e-07	30.0	0.0	4.7e-07	29.5	0.0	1.3	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|15921107|ref|NP_376776.1|	-	0.00044	19.9	0.0	0.0007	19.3	0.0	1.4	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_5	PF14597.1	gi|15921107|ref|NP_376776.1|	-	0.00053	19.4	0.0	0.056	12.8	0.0	2.1	2	0	0	2	2	2	2	Metallo-beta-lactamase	superfamily
DoxD	PF04173.8	gi|15921108|ref|NP_376777.1|	-	7.3e-64	214.4	8.4	8.1e-64	214.3	5.8	1.0	1	0	0	1	1	1	1	TQO	small	subunit	DoxD
DoxX	PF07681.7	gi|15921108|ref|NP_376777.1|	-	2.2e-05	24.7	2.0	2.2e-05	24.7	1.4	1.9	2	1	0	2	2	2	1	DoxX
DUF373	PF04123.8	gi|15921108|ref|NP_376777.1|	-	0.013	14.5	0.9	0.013	14.5	0.6	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF373)
DoxX_3	PF13781.1	gi|15921108|ref|NP_376777.1|	-	1.6	9.0	6.4	29	5.0	2.1	3.1	2	1	0	2	2	2	0	DoxX-like	family
Lactonase	PF10282.4	gi|15921110|ref|NP_376779.1|	-	0.00039	19.6	0.0	0.034	13.2	0.0	2.8	1	1	0	1	1	1	1	Lactonase,	7-bladed	beta-propeller
Cytochrom_D1	PF02239.11	gi|15921110|ref|NP_376779.1|	-	0.0004	18.7	0.0	0.034	12.4	0.0	3.0	1	1	0	1	1	1	1	Cytochrome	D1	heme	domain
DUF1236	PF06823.7	gi|15921110|ref|NP_376779.1|	-	0.0046	16.6	2.6	0.074	12.7	0.2	3.2	3	1	0	3	3	3	1	Protein	of	unknown	function	(DUF1236)
Lgl_C	PF08596.5	gi|15921110|ref|NP_376779.1|	-	0.03	12.7	0.2	0.097	11.1	0.0	1.9	2	0	0	2	2	2	0	Lethal	giant	larvae(Lgl)	like,	C-terminal
DrsE	PF02635.10	gi|15921111|ref|NP_376780.1|	-	2.8e-07	30.6	0.0	2.9e-07	30.5	0.0	1.1	1	0	0	1	1	1	1	DsrE/DsrF-like	family
zf-DNL	PF05180.7	gi|15921111|ref|NP_376780.1|	-	0.099	12.3	0.0	0.16	11.6	0.0	1.3	1	0	0	1	1	1	0	DNL	zinc	finger
TusA	PF01206.12	gi|15921113|ref|NP_376782.1|	-	2.4e-14	52.6	0.0	8.7e-14	50.8	0.0	2.0	2	0	0	2	2	2	1	Sulfurtransferase	TusA
Imm36	PF15597.1	gi|15921113|ref|NP_376782.1|	-	0.057	13.5	1.2	0.43	10.7	0.2	2.5	2	0	0	2	2	2	0	Immunity	protein	36
DUF2179	PF10035.4	gi|15921113|ref|NP_376782.1|	-	0.17	11.5	1.0	1.6	8.3	0.1	2.8	3	0	0	3	3	3	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2179)
TusA	PF01206.12	gi|15921114|ref|NP_376783.1|	-	2.1e-12	46.4	0.1	2.3e-12	46.3	0.1	1.0	1	0	0	1	1	1	1	Sulfurtransferase	TusA
TusA	PF01206.12	gi|15921115|ref|NP_376784.1|	-	8.3e-16	57.3	0.1	1.3e-15	56.6	0.1	1.3	1	0	0	1	1	1	1	Sulfurtransferase	TusA
DUF2249	PF10006.4	gi|15921115|ref|NP_376784.1|	-	0.0012	18.4	0.0	0.0022	17.5	0.0	1.5	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2249)
TusA	PF01206.12	gi|15921116|ref|NP_376785.1|	-	3.1e-19	68.3	0.1	3.6e-19	68.1	0.1	1.0	1	0	0	1	1	1	1	Sulfurtransferase	TusA
DUF2249	PF10006.4	gi|15921116|ref|NP_376785.1|	-	0.0007	19.1	0.0	0.001	18.5	0.0	1.4	1	1	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2249)
Rho_GDI	PF02115.12	gi|15921116|ref|NP_376785.1|	-	0.054	12.9	0.1	0.054	12.9	0.0	1.1	1	0	0	1	1	1	0	RHO	protein	GDP	dissociation	inhibitor
HeH	PF12949.2	gi|15921116|ref|NP_376785.1|	-	0.085	12.4	0.0	0.16	11.5	0.0	1.6	1	1	0	1	1	1	0	HeH/LEM	domain
Sulf_transp	PF04143.9	gi|15921118|ref|NP_376787.1|	-	3.6e-16	58.8	27.4	2.9e-11	43.1	4.6	4.1	4	0	0	4	4	4	2	Sulphur	transport
VIT1	PF01988.14	gi|15921118|ref|NP_376787.1|	-	0.0014	18.1	1.4	0.0014	18.1	1.0	3.9	4	1	1	5	5	5	1	VIT	family
DUF2231	PF09990.4	gi|15921118|ref|NP_376787.1|	-	2.2	8.6	12.5	0.19	12.1	3.7	3.0	3	1	0	3	3	3	0	Predicted	membrane	protein	(DUF2231)
DrsE_2	PF13686.1	gi|15921119|ref|NP_376788.1|	-	6.7e-09	35.6	2.5	0.00038	20.2	0.1	2.0	1	1	1	2	2	2	2	DsrE/DsrF/DrsH-like	family
DrsE	PF02635.10	gi|15921119|ref|NP_376788.1|	-	8.1e-09	35.5	0.1	9.1e-09	35.4	0.1	1.1	1	0	0	1	1	1	1	DsrE/DsrF-like	family
Glycos_transf_1	PF00534.15	gi|15921120|ref|NP_376789.1|	-	1.2e-21	76.8	0.2	1.3e-21	76.7	0.1	1.0	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|15921120|ref|NP_376789.1|	-	2.8e-15	56.6	0.0	3e-15	56.5	0.0	1.0	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|15921120|ref|NP_376789.1|	-	0.12	12.6	0.0	0.17	12.1	0.0	1.3	1	0	0	1	1	1	0	Glycosyl	transferases	group	1
Glycos_transf_2	PF00535.21	gi|15921122|ref|NP_376791.1|	-	4.4e-18	65.5	0.0	1e-17	64.3	0.0	1.6	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|15921122|ref|NP_376791.1|	-	0.0002	21.2	0.0	0.00032	20.5	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
DUF3367	PF11847.3	gi|15921123|ref|NP_376792.1|	-	0.23	9.3	0.0	0.46	8.3	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3367)
FeoB_N	PF02421.13	gi|15921124|ref|NP_376793.1|	-	0.08	12.2	0.0	0.17	11.1	0.0	1.5	1	0	0	1	1	1	0	Ferrous	iron	transport	protein	B
FAD_binding_7	PF03441.9	gi|15921125|ref|NP_376794.1|	-	8.8e-83	277.7	1.5	1.2e-82	277.2	1.0	1.1	1	0	0	1	1	1	1	FAD	binding	domain	of	DNA	photolyase
DNA_photolyase	PF00875.13	gi|15921125|ref|NP_376794.1|	-	7.7e-34	116.8	0.1	5e-33	114.1	0.0	2.0	2	0	0	2	2	2	1	DNA	photolyase
DJ-1_PfpI	PF01965.19	gi|15921126|ref|NP_376795.1|	-	1.2e-37	128.6	0.0	1.4e-37	128.4	0.0	1.0	1	0	0	1	1	1	1	DJ-1/PfpI	family
DUF4066	PF13278.1	gi|15921126|ref|NP_376795.1|	-	1e-09	37.8	0.0	1.3e-09	37.4	0.0	1.1	1	0	0	1	1	1	1	Putative	amidotransferase
GATase	PF00117.23	gi|15921126|ref|NP_376795.1|	-	0.016	14.6	0.0	0.02	14.3	0.0	1.3	1	0	0	1	1	1	0	Glutamine	amidotransferase	class-I
GATase_5	PF13507.1	gi|15921126|ref|NP_376795.1|	-	0.055	12.3	0.0	0.21	10.4	0.0	1.8	1	1	0	1	1	1	0	CobB/CobQ-like	glutamine	amidotransferase	domain
MFS_1	PF07690.11	gi|15921127|ref|NP_376796.1|	-	8.7e-07	27.9	13.8	1.9e-06	26.8	9.6	1.5	1	1	0	1	1	1	1	Major	Facilitator	Superfamily
MFS_1	PF07690.11	gi|15921128|ref|NP_376797.1|	-	4.3e-10	38.8	17.7	1.8e-09	36.8	12.3	1.7	1	1	0	1	1	1	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|15921128|ref|NP_376797.1|	-	4.9e-06	25.3	7.8	7.8e-06	24.7	5.4	1.4	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
DUF2919	PF11143.3	gi|15921128|ref|NP_376797.1|	-	0.047	13.5	2.1	0.057	13.2	0.0	2.1	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2919)
Glycos_transf_1	PF00534.15	gi|15921129|ref|NP_376798.1|	-	5.2e-16	58.5	0.0	1e-15	57.5	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|15921129|ref|NP_376798.1|	-	6e-07	29.6	0.0	1.3e-06	28.6	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Phosphorylase	PF00343.15	gi|15921129|ref|NP_376798.1|	-	2e-05	22.7	0.1	8.5e-05	20.6	0.0	1.9	1	1	1	2	2	2	1	Carbohydrate	phosphorylase
Phage_Mu_Gam	PF07352.7	gi|15921129|ref|NP_376798.1|	-	0.064	12.7	0.3	0.064	12.7	0.2	2.5	2	1	0	2	2	2	0	Bacteriophage	Mu	Gam	like	protein
Thermopsin	PF05317.6	gi|15921130|ref|NP_376799.1|	-	9.8e-71	237.7	23.9	9.8e-71	237.7	16.5	3.8	3	1	0	3	3	3	1	Thermopsin
HEPN	PF05168.9	gi|15921131|ref|NP_376800.1|	-	2.1e-24	85.7	0.7	2.5e-24	85.4	0.5	1.0	1	0	0	1	1	1	1	HEPN	domain
PaREP1	PF05942.6	gi|15921132|ref|NP_376801.1|	-	3e-26	91.5	0.5	4e-26	91.1	0.4	1.2	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
DUF2663	PF10864.3	gi|15921133|ref|NP_376802.1|	-	0.086	13.0	3.4	0.099	12.8	2.4	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2663)
GnsAB	PF08178.6	gi|15921133|ref|NP_376802.1|	-	0.26	10.9	4.4	0.55	9.9	3.0	1.7	1	1	0	1	1	1	0	GnsA/GnsB	family
DUF3007	PF11460.3	gi|15921133|ref|NP_376802.1|	-	0.5	10.4	2.2	0.64	10.1	1.6	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3007)
PIN	PF01850.16	gi|15921134|ref|NP_376803.1|	-	3.2e-09	37.1	0.1	4.5e-09	36.6	0.0	1.2	1	0	0	1	1	1	1	PIN	domain
TM_helix	PF05552.7	gi|15921134|ref|NP_376803.1|	-	0.019	14.6	0.0	0.99	9.1	0.0	2.3	2	0	0	2	2	2	0	Conserved	TM	helix
Toprim_Crpt	PF13342.1	gi|15921135|ref|NP_376804.1|	-	0.017	14.7	0.1	0.033	13.8	0.1	1.5	1	0	0	1	1	1	0	C-terminal	repeat	of	topoisomerase
DUF3102	PF11300.3	gi|15921135|ref|NP_376804.1|	-	0.087	12.8	0.7	3.5	7.6	0.5	2.2	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3102)
NDUF_B5	PF09781.4	gi|15921135|ref|NP_376804.1|	-	1.2	8.3	8.6	0.33	10.1	1.3	2.5	3	0	0	3	3	3	0	NADH:ubiquinone	oxidoreductase,	NDUFB5/SGDH	subunit
Pkinase	PF00069.20	gi|15921136|ref|NP_376805.1|	-	1.9e-29	102.6	0.0	2.6e-29	102.1	0.0	1.2	1	0	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|15921136|ref|NP_376805.1|	-	5.1e-15	55.2	0.0	1.1e-14	54.2	0.0	1.5	1	1	0	1	1	1	1	Protein	tyrosine	kinase
MFS_1	PF07690.11	gi|15921137|ref|NP_376806.1|	-	1.3e-25	89.9	34.5	4.5e-15	55.2	11.1	2.2	2	0	0	2	2	2	2	Major	Facilitator	Superfamily
MFS_1_like	PF12832.2	gi|15921137|ref|NP_376806.1|	-	0.012	15.3	0.2	0.012	15.3	0.1	3.9	4	1	0	4	4	4	0	MFS_1	like	family
Folate_carrier	PF01770.13	gi|15921137|ref|NP_376806.1|	-	0.065	11.7	7.3	0.3	9.5	0.5	2.3	2	0	0	2	2	2	0	Reduced	folate	carrier
MFS_3	PF05977.8	gi|15921137|ref|NP_376806.1|	-	0.71	7.9	6.9	0.44	8.6	0.1	2.6	3	0	0	3	3	3	0	Transmembrane	secretion	effector
ABC_tran	PF00005.22	gi|15921138|ref|NP_376807.1|	-	2.8e-35	121.5	0.0	3.6e-35	121.2	0.0	1.1	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|15921138|ref|NP_376807.1|	-	6.3e-18	65.7	0.0	1e-15	58.5	0.0	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|15921138|ref|NP_376807.1|	-	2.5e-10	40.0	1.0	8e-05	21.8	0.0	2.0	1	1	1	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|15921138|ref|NP_376807.1|	-	1.9e-07	30.5	0.6	1.9e-06	27.2	0.4	2.0	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_22	PF13401.1	gi|15921138|ref|NP_376807.1|	-	3.5e-06	27.1	0.4	4.8e-05	23.5	0.2	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|15921138|ref|NP_376807.1|	-	6e-05	22.6	0.1	0.14	11.5	0.0	2.2	2	0	0	2	2	2	2	AAA-like	domain
AAA_23	PF13476.1	gi|15921138|ref|NP_376807.1|	-	7.7e-05	23.1	2.5	0.00039	20.7	1.7	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_25	PF13481.1	gi|15921138|ref|NP_376807.1|	-	0.00054	19.4	0.1	0.017	14.5	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_29	PF13555.1	gi|15921138|ref|NP_376807.1|	-	0.00055	19.4	0.2	0.001	18.5	0.1	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
RNA12	PF10443.4	gi|15921138|ref|NP_376807.1|	-	0.013	14.0	0.0	0.013	13.9	0.0	1.2	1	0	0	1	1	1	0	RNA12	protein
AAA	PF00004.24	gi|15921138|ref|NP_376807.1|	-	0.013	15.6	0.8	3.1	8.0	0.0	2.2	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_18	PF13238.1	gi|15921138|ref|NP_376807.1|	-	0.02	15.1	1.0	0.16	12.3	0.3	2.5	2	1	0	2	2	2	0	AAA	domain
cobW	PF02492.14	gi|15921138|ref|NP_376807.1|	-	0.021	14.2	0.0	0.036	13.5	0.0	1.5	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_17	PF13207.1	gi|15921138|ref|NP_376807.1|	-	0.021	15.6	1.4	0.055	14.2	1.0	2.2	1	1	0	1	1	1	0	AAA	domain
AAA_16	PF13191.1	gi|15921138|ref|NP_376807.1|	-	0.037	14.0	0.6	0.092	12.7	0.4	1.8	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_33	PF13671.1	gi|15921138|ref|NP_376807.1|	-	0.053	13.3	0.2	0.14	12.0	0.1	1.8	1	1	0	1	1	1	0	AAA	domain
Arch_ATPase	PF01637.13	gi|15921138|ref|NP_376807.1|	-	0.061	13.0	0.4	0.69	9.5	0.3	2.1	1	1	0	1	1	1	0	Archaeal	ATPase
NACHT	PF05729.7	gi|15921138|ref|NP_376807.1|	-	0.061	12.9	0.2	0.19	11.4	0.1	1.8	2	0	0	2	2	2	0	NACHT	domain
AAA_19	PF13245.1	gi|15921138|ref|NP_376807.1|	-	0.083	12.6	0.2	0.45	10.3	0.0	2.1	2	1	0	2	2	2	0	Part	of	AAA	domain
DUF258	PF03193.11	gi|15921138|ref|NP_376807.1|	-	0.16	11.1	0.0	0.27	10.3	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
NPCBM_assoc	PF10633.4	gi|15921139|ref|NP_376808.1|	-	1.2e-10	41.3	5.1	0.25	11.4	0.4	8.1	8	0	0	8	8	8	2	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
CARDB	PF07705.6	gi|15921139|ref|NP_376808.1|	-	2.7e-10	40.2	27.0	6.7e-05	22.8	0.8	6.4	5	1	2	7	7	7	3	CARDB
Transglut_C	PF00927.17	gi|15921139|ref|NP_376808.1|	-	1.3e-05	25.1	9.5	0.082	12.9	0.1	4.3	4	0	0	4	4	4	3	Transglutaminase	family,	C-terminal	ig	like	domain
Coatamer_beta_C	PF07718.7	gi|15921139|ref|NP_376808.1|	-	0.00081	19.0	4.3	0.011	15.3	0.6	2.8	2	0	0	2	2	2	1	Coatomer	beta	C-terminal	region
Rifin_STEVOR	PF02009.11	gi|15921139|ref|NP_376808.1|	-	0.016	14.8	0.1	0.026	14.1	0.1	1.3	1	0	0	1	1	1	0	Rifin/stevor	family
TRAP_beta	PF05753.9	gi|15921139|ref|NP_376808.1|	-	0.043	12.9	14.3	1.7	7.7	0.0	6.3	7	0	0	7	7	7	0	Translocon-associated	protein	beta	(TRAPB)
DUF3869	PF12985.2	gi|15921139|ref|NP_376808.1|	-	4.3	7.8	8.5	5	7.6	0.1	4.0	3	2	1	4	4	4	0	Domain	of	unknown	function	(DUF3869)
MacB_PCD	PF12704.2	gi|15921140|ref|NP_376809.1|	-	3.4e-31	108.6	4.5	3.4e-31	108.6	3.1	2.1	3	0	0	3	3	3	1	MacB-like	periplasmic	core	domain
FtsX	PF02687.16	gi|15921140|ref|NP_376809.1|	-	5.4e-20	71.3	16.5	5.4e-20	71.3	11.4	2.8	2	2	0	2	2	2	1	FtsX-like	permease	family
PIN	PF01850.16	gi|15921141|ref|NP_376810.1|	-	2.7e-09	37.4	0.4	2.9e-09	37.2	0.3	1.0	1	0	0	1	1	1	1	PIN	domain
TFIID-18kDa	PF02269.11	gi|15921141|ref|NP_376810.1|	-	0.082	12.7	0.2	0.17	11.7	0.0	1.7	2	0	0	2	2	2	0	Transcription	initiation	factor	IID,	18kD	subunit
Antitoxin-MazE	PF04014.13	gi|15921142|ref|NP_376811.1|	-	3.1e-12	45.9	0.2	5.2e-12	45.2	0.1	1.3	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
HSDR_N_2	PF13588.1	gi|15921142|ref|NP_376811.1|	-	0.024	14.4	0.0	0.033	13.9	0.0	1.1	1	0	0	1	1	1	0	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
Nha1_C	PF08619.5	gi|15921142|ref|NP_376811.1|	-	0.12	11.5	0.1	0.12	11.5	0.0	1.1	1	0	0	1	1	1	0	Alkali	metal	cation/H+	antiporter	Nha1	C	terminus
DUF772	PF05598.6	gi|15921143|ref|NP_376812.1|	-	1.7e-05	24.5	0.1	4.4e-05	23.3	0.1	1.7	1	1	0	1	1	1	1	Transposase	domain	(DUF772)
DDE_Tnp_1	PF01609.16	gi|15921143|ref|NP_376812.1|	-	0.049	13.1	0.0	1.7	8.1	0.0	2.3	1	1	1	2	2	2	0	Transposase	DDE	domain
PD40	PF07676.7	gi|15921144|ref|NP_376813.1|	-	0.00011	21.7	0.2	0.0017	17.9	0.0	2.9	2	1	0	2	2	2	1	WD40-like	Beta	Propeller	Repeat
DPPIV_N	PF00930.16	gi|15921144|ref|NP_376813.1|	-	0.0094	14.5	0.0	0.021	13.4	0.0	1.5	1	1	0	1	1	1	1	Dipeptidyl	peptidase	IV	(DPP	IV)	N-terminal	region
PaREP1	PF05942.6	gi|15921145|ref|NP_376814.1|	-	2.4e-22	78.9	0.4	2.8e-22	78.7	0.3	1.1	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
HEPN	PF05168.9	gi|15921145|ref|NP_376814.1|	-	0.018	14.8	0.1	0.029	14.2	0.1	1.5	1	0	0	1	1	1	0	HEPN	domain
TPR_11	PF13414.1	gi|15921145|ref|NP_376814.1|	-	0.086	12.4	0.1	0.19	11.4	0.1	1.6	1	0	0	1	1	1	0	TPR	repeat
Sugar_tr	PF00083.19	gi|15921146|ref|NP_376815.1|	-	1.7e-80	270.8	32.1	2e-80	270.5	22.2	1.1	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|15921146|ref|NP_376815.1|	-	1.7e-19	69.7	36.8	1.7e-19	69.7	25.5	2.1	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
SLA_LP_auto_ag	PF05889.8	gi|15921146|ref|NP_376815.1|	-	0.1	11.0	0.0	0.18	10.2	0.0	1.3	1	0	0	1	1	1	0	Soluble	liver	antigen/liver	pancreas	antigen	(SLA/LP	autoantigen)
YtxH	PF12732.2	gi|15921146|ref|NP_376815.1|	-	0.34	11.3	1.6	0.79	10.1	0.0	2.5	2	0	0	2	2	2	0	YtxH-like	protein
zf-ribbon_3	PF13248.1	gi|15921147|ref|NP_376816.1|	-	2.5e-12	45.6	14.3	3.1e-06	26.2	3.7	2.2	2	0	0	2	2	2	2	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|15921147|ref|NP_376816.1|	-	3.1e-11	42.4	14.4	1.4e-05	24.4	1.8	2.2	2	0	0	2	2	2	2	zinc-ribbon	domain
DZR	PF12773.2	gi|15921147|ref|NP_376816.1|	-	1.5e-10	40.6	13.8	2.3e-10	40.0	9.6	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
ETRAMP	PF09716.5	gi|15921147|ref|NP_376816.1|	-	0.0081	16.0	0.4	0.015	15.2	0.2	1.4	1	0	0	1	1	1	1	Malarial	early	transcribed	membrane	protein	(ETRAMP)
PolC_DP2	PF03833.8	gi|15921147|ref|NP_376816.1|	-	0.011	13.4	5.9	0.017	12.7	2.2	1.9	2	0	0	2	2	2	0	DNA	polymerase	II	large	subunit	DP2
Nudix_N_2	PF14803.1	gi|15921147|ref|NP_376816.1|	-	0.011	15.3	12.0	2.3	7.9	0.0	3.9	3	1	0	3	3	3	0	Nudix	N-terminal
NMD3	PF04981.8	gi|15921147|ref|NP_376816.1|	-	0.014	14.4	2.8	0.022	13.8	2.0	1.4	1	0	0	1	1	1	0	NMD3	family
Adeno_E4_34	PF04528.8	gi|15921147|ref|NP_376816.1|	-	0.051	13.1	1.0	0.087	12.4	0.7	1.3	1	0	0	1	1	1	0	Adenovirus	early	E4	34	kDa	protein	conserved	region
Rax2	PF12768.2	gi|15921147|ref|NP_376816.1|	-	0.062	12.5	0.8	1	8.5	0.3	2.1	1	1	1	2	2	2	0	Cortical	protein	marker	for	cell	polarity
DUF2321	PF10083.4	gi|15921147|ref|NP_376816.1|	-	0.13	11.7	7.3	0.2	11.1	1.7	2.6	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2321)
zf-NADH-PPase	PF09297.6	gi|15921147|ref|NP_376816.1|	-	0.32	10.5	16.9	1.7	8.2	3.5	3.6	2	2	1	3	3	3	0	NADH	pyrophosphatase	zinc	ribbon	domain
UPF0547	PF10571.4	gi|15921147|ref|NP_376816.1|	-	0.46	10.2	17.7	1.3	8.8	0.1	3.9	2	1	0	3	3	3	0	Uncharacterised	protein	family	UPF0547
zf-RanBP	PF00641.13	gi|15921147|ref|NP_376816.1|	-	0.56	9.3	9.2	0.29	10.2	1.5	2.5	2	1	0	2	2	2	0	Zn-finger	in	Ran	binding	protein	and	others
Lar_restr_allev	PF14354.1	gi|15921147|ref|NP_376816.1|	-	1.9	8.8	6.2	11	6.4	4.3	2.1	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
FYVE_2	PF02318.11	gi|15921147|ref|NP_376816.1|	-	3.6	7.5	7.2	2.6	7.9	4.0	1.5	1	1	0	1	1	1	0	FYVE-type	zinc	finger
zf-B_box	PF00643.19	gi|15921147|ref|NP_376816.1|	-	8.6	6.3	10.2	5	7.1	3.3	2.3	1	1	1	2	2	2	0	B-box	zinc	finger
zf-FPG_IleRS	PF06827.9	gi|15921147|ref|NP_376816.1|	-	9	6.0	14.1	35	4.1	6.6	3.1	2	1	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
MarR_2	PF12802.2	gi|15921148|ref|NP_376817.1|	-	0.00082	19.0	0.0	0.0089	15.6	0.0	2.2	2	0	0	2	2	2	1	MarR	family
z-alpha	PF02295.12	gi|15921148|ref|NP_376817.1|	-	0.0018	17.9	0.0	0.0048	16.6	0.0	1.6	2	0	0	2	2	2	1	Adenosine	deaminase	z-alpha	domain
FeoC	PF09012.5	gi|15921148|ref|NP_376817.1|	-	0.0018	17.9	0.9	0.0075	15.9	0.0	2.4	3	0	0	3	3	3	1	FeoC	like	transcriptional	regulator
MarR	PF01047.17	gi|15921148|ref|NP_376817.1|	-	0.0022	17.6	0.0	0.0047	16.6	0.0	1.5	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|15921148|ref|NP_376817.1|	-	0.0039	16.8	0.4	0.021	14.4	0.1	2.3	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
Rrf2	PF02082.15	gi|15921148|ref|NP_376817.1|	-	0.0051	16.8	0.0	0.0089	16.1	0.0	1.4	1	0	0	1	1	1	1	Transcriptional	regulator
TBPIP	PF07106.8	gi|15921148|ref|NP_376817.1|	-	0.0065	16.0	0.7	0.0076	15.8	0.5	1.2	1	0	0	1	1	1	1	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
DUF2250	PF10007.4	gi|15921148|ref|NP_376817.1|	-	0.0081	16.0	0.4	0.021	14.7	0.1	1.8	1	1	1	2	2	2	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF4423	PF14394.1	gi|15921148|ref|NP_376817.1|	-	0.0095	15.4	0.3	0.036	13.5	0.0	1.8	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4423)
HTH_20	PF12840.2	gi|15921148|ref|NP_376817.1|	-	0.027	14.2	0.0	0.056	13.2	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_27	PF13463.1	gi|15921148|ref|NP_376817.1|	-	0.04	14.2	0.0	0.093	13.0	0.0	1.7	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
RPA_C	PF08784.6	gi|15921148|ref|NP_376817.1|	-	0.047	14.1	0.0	0.11	12.8	0.0	1.6	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
SbcD_C	PF12320.3	gi|15921148|ref|NP_376817.1|	-	0.071	13.1	2.1	0.26	11.3	0.1	2.2	2	1	1	3	3	3	0	Type	5	capsule	protein	repressor	C-terminal	domain
SelB-wing_2	PF09106.6	gi|15921148|ref|NP_376817.1|	-	0.1	12.5	0.0	9.6	6.2	0.0	2.3	2	0	0	2	2	2	0	Elongation	factor	SelB,	winged	helix
Phage_Mu_Gam	PF07352.7	gi|15921148|ref|NP_376817.1|	-	0.11	12.0	1.7	12	5.3	0.0	2.7	2	1	1	3	3	3	0	Bacteriophage	Mu	Gam	like	protein
RuvB_C	PF05491.8	gi|15921148|ref|NP_376817.1|	-	0.11	12.1	0.0	0.26	10.9	0.0	1.6	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	ruvB	C-terminus
Wbp11	PF09429.5	gi|15921148|ref|NP_376817.1|	-	0.15	12.0	2.1	11	6.0	0.2	2.3	2	0	0	2	2	2	0	WW	domain	binding	protein	11
Cauli_AT	PF03233.8	gi|15921148|ref|NP_376817.1|	-	0.24	11.1	2.3	0.27	10.9	0.2	2.1	1	1	2	3	3	3	0	Aphid	transmission	protein
DUF655	PF04919.7	gi|15921148|ref|NP_376817.1|	-	0.24	11.1	3.2	5	6.8	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF655)
DUF1192	PF06698.6	gi|15921148|ref|NP_376817.1|	-	0.86	9.4	3.6	1.7	8.5	0.2	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1192)
AAA_17	PF13207.1	gi|15921149|ref|NP_376818.1|	-	0.00072	20.3	1.7	0.0077	17.0	0.5	2.8	2	2	0	2	2	2	1	AAA	domain
AAA_18	PF13238.1	gi|15921149|ref|NP_376818.1|	-	0.0036	17.6	1.8	0.013	15.8	0.0	2.6	2	1	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|15921149|ref|NP_376818.1|	-	0.004	17.3	0.1	0.024	14.7	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
Img2	PF05046.9	gi|15921149|ref|NP_376818.1|	-	0.0059	16.8	0.4	3.9	7.7	0.0	2.8	2	0	0	2	2	2	1	Mitochondrial	large	subunit	ribosomal	protein	(Img2)
NB-ARC	PF00931.17	gi|15921149|ref|NP_376818.1|	-	0.0096	14.7	0.0	0.025	13.4	0.0	1.6	1	0	0	1	1	1	1	NB-ARC	domain
NACHT	PF05729.7	gi|15921149|ref|NP_376818.1|	-	0.01	15.4	0.1	0.37	10.4	0.0	2.4	2	0	0	2	2	2	0	NACHT	domain
AAA_24	PF13479.1	gi|15921149|ref|NP_376818.1|	-	0.011	15.2	0.1	0.023	14.2	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_16	PF13191.1	gi|15921149|ref|NP_376818.1|	-	0.016	15.2	0.0	0.046	13.6	0.0	1.7	1	0	0	1	1	1	0	AAA	ATPase	domain
ABC_tran	PF00005.22	gi|15921149|ref|NP_376818.1|	-	0.027	14.7	0.5	0.1	12.9	0.0	2.1	2	1	0	2	2	2	0	ABC	transporter
AAA_11	PF13086.1	gi|15921149|ref|NP_376818.1|	-	0.028	14.0	0.2	0.15	11.5	0.1	2.2	1	1	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.17	gi|15921149|ref|NP_376818.1|	-	0.029	14.5	0.1	0.1	12.7	0.0	2.0	2	0	0	2	2	1	0	RNA	helicase
AAA	PF00004.24	gi|15921149|ref|NP_376818.1|	-	0.034	14.3	0.2	0.13	12.4	0.2	2.2	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
NTPase_1	PF03266.10	gi|15921149|ref|NP_376818.1|	-	0.042	13.5	0.3	0.2	11.3	0.2	2.1	1	0	0	1	1	1	0	NTPase
AAA_19	PF13245.1	gi|15921149|ref|NP_376818.1|	-	0.043	13.5	0.0	0.18	11.5	0.0	2.0	2	0	0	2	2	2	0	Part	of	AAA	domain
FAT	PF02259.18	gi|15921149|ref|NP_376818.1|	-	0.047	12.6	0.2	0.19	10.6	0.0	1.9	2	0	0	2	2	2	0	FAT	domain
DUF258	PF03193.11	gi|15921149|ref|NP_376818.1|	-	0.066	12.3	0.0	0.14	11.3	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_25	PF13481.1	gi|15921149|ref|NP_376818.1|	-	0.066	12.5	0.0	0.15	11.4	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|15921149|ref|NP_376818.1|	-	0.072	12.5	0.1	0.15	11.5	0.0	1.7	1	1	0	1	1	1	0	AAA-like	domain
AAA_30	PF13604.1	gi|15921149|ref|NP_376818.1|	-	0.11	12.0	0.0	0.22	11.0	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_14	PF13173.1	gi|15921149|ref|NP_376818.1|	-	0.15	11.9	2.0	2.5	8.0	0.0	3.1	2	1	0	3	3	3	0	AAA	domain
PaREP1	PF05942.6	gi|15921150|ref|NP_376819.1|	-	8.5e-07	28.8	1.6	1.2e-06	28.3	1.1	1.3	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
FDX-ACB	PF03147.9	gi|15921150|ref|NP_376819.1|	-	0.037	14.1	0.3	0.068	13.3	0.2	1.4	1	1	0	1	1	1	0	Ferredoxin-fold	anticodon	binding	domain
DED	PF01335.16	gi|15921150|ref|NP_376819.1|	-	0.12	12.5	1.4	0.37	10.9	0.1	2.2	2	0	0	2	2	2	0	Death	effector	domain
Acyl-CoA_dh_1	PF00441.19	gi|15921151|ref|NP_376820.1|	-	1.4e-22	80.4	0.9	2.5e-22	79.5	0.7	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_2	PF08028.6	gi|15921151|ref|NP_376820.1|	-	1.7e-17	63.9	1.3	9.7e-17	61.4	0.9	2.1	1	1	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|15921151|ref|NP_376820.1|	-	7.2e-12	44.6	0.2	1.3e-11	43.8	0.1	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_N	PF02771.11	gi|15921151|ref|NP_376820.1|	-	1.9e-10	41.2	0.0	4.9e-10	39.9	0.0	1.7	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
HMA	PF00403.21	gi|15921153|ref|NP_376822.1|	-	2.2	8.4	4.5	9.6	6.4	0.1	3.0	3	0	0	3	3	3	0	Heavy-metal-associated	domain
Trypsin_2	PF13365.1	gi|15921154|ref|NP_376823.1|	-	4.8e-17	62.0	0.6	9.5e-17	61.1	0.4	1.5	1	0	0	1	1	1	1	Trypsin-like	peptidase	domain
PDZ_2	PF13180.1	gi|15921154|ref|NP_376823.1|	-	7e-15	54.6	0.4	1.6e-14	53.5	0.2	1.6	1	0	0	1	1	1	1	PDZ	domain
Trypsin	PF00089.21	gi|15921154|ref|NP_376823.1|	-	3e-10	40.0	0.2	2.1e-09	37.2	0.1	2.0	1	1	0	1	1	1	1	Trypsin
PDZ	PF00595.19	gi|15921154|ref|NP_376823.1|	-	3.3e-08	33.5	0.1	7.5e-08	32.4	0.0	1.6	1	0	0	1	1	1	1	PDZ	domain	(Also	known	as	DHR	or	GLGF)
Tricorn_PDZ	PF14685.1	gi|15921154|ref|NP_376823.1|	-	0.00099	18.8	0.1	0.0033	17.2	0.0	1.8	1	0	0	1	1	1	1	Tricorn	protease	PDZ	domain
Peptidase_S32	PF05579.8	gi|15921154|ref|NP_376823.1|	-	0.0034	16.4	0.6	0.83	8.5	0.1	2.4	2	1	0	2	2	2	2	Equine	arteritis	virus	serine	endopeptidase	S32
Peptidase_S7	PF00949.16	gi|15921154|ref|NP_376823.1|	-	0.014	14.7	0.1	0.021	14.2	0.1	1.4	1	0	0	1	1	1	0	Peptidase	S7,	Flavivirus	NS3	serine	protease
Peptidase_S46	PF10459.4	gi|15921154|ref|NP_376823.1|	-	0.017	13.5	0.4	0.026	12.9	0.2	1.2	1	0	0	1	1	1	0	Peptidase	S46
GRASP55_65	PF04495.9	gi|15921154|ref|NP_376823.1|	-	0.058	13.3	0.0	0.12	12.4	0.0	1.5	1	0	0	1	1	1	0	GRASP55/65	PDZ-like	domain
Peptidase_S29	PF02907.10	gi|15921154|ref|NP_376823.1|	-	0.083	12.4	0.1	0.24	10.9	0.0	1.7	2	0	0	2	2	2	0	Hepatitis	C	virus	NS3	protease
SPAN	PF02510.9	gi|15921154|ref|NP_376823.1|	-	0.12	11.4	0.2	0.49	9.3	0.0	1.8	2	0	0	2	2	2	0	Surface	presentation	of	antigens	protein
Cas_NE0113	PF09623.5	gi|15921155|ref|NP_376824.1|	-	9.6e-07	28.4	0.4	5.6e-06	25.9	0.3	2.1	1	1	0	1	1	1	1	CRISPR-associated	protein	NE0113	(Cas_NE0113)
Cas_Cas02710	PF09670.5	gi|15921155|ref|NP_376824.1|	-	0.022	13.3	0.2	0.036	12.6	0.1	1.4	1	1	0	1	1	1	0	CRISPR-associated	protein	(Cas_Cas02710)
DUF1090	PF06476.7	gi|15921155|ref|NP_376824.1|	-	0.065	12.9	0.7	0.1	12.2	0.5	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1090)
CPL	PF08144.6	gi|15921155|ref|NP_376824.1|	-	0.073	12.9	0.3	3.2	7.5	0.1	2.1	2	0	0	2	2	2	0	CPL	(NUC119)	domain
IF-2B	PF01008.12	gi|15921156|ref|NP_376825.1|	-	9.9e-77	257.6	0.1	1.2e-76	257.4	0.1	1.0	1	0	0	1	1	1	1	Initiation	factor	2	subunit	family
DUF4398	PF14346.1	gi|15921156|ref|NP_376825.1|	-	0.12	12.3	1.9	0.2	11.7	1.3	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4398)
ProRS-C_2	PF09181.5	gi|15921156|ref|NP_376825.1|	-	3	7.8	8.5	25	4.8	0.0	4.5	4	1	1	5	5	5	0	Prolyl-tRNA	synthetase,	C-terminal
Peptidase_M56	PF05569.6	gi|15921157|ref|NP_376826.1|	-	0.032	13.2	0.0	0.038	12.9	0.0	1.2	1	0	0	1	1	1	0	BlaR1	peptidase	M56
DUF4049	PF13258.1	gi|15921157|ref|NP_376826.1|	-	0.076	11.9	0.0	0.092	11.7	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4049)
PAP2	PF01569.16	gi|15921159|ref|NP_376828.1|	-	2.3	7.9	21.9	97	2.6	15.2	2.6	1	1	0	1	1	1	0	PAP2	superfamily
Alpha-amylase	PF00128.19	gi|15921160|ref|NP_376829.1|	-	1.3e-20	74.0	0.3	1.7e-20	73.6	0.2	1.2	1	0	0	1	1	1	1	Alpha	amylase,	catalytic	domain
CBM_48	PF02922.13	gi|15921160|ref|NP_376829.1|	-	2.4e-05	24.2	0.0	0.0001	22.2	0.0	2.0	2	0	0	2	2	2	1	Carbohydrate-binding	module	48	(Isoamylase	N-terminal	domain)
Alpha-amyl_C	PF09071.5	gi|15921161|ref|NP_376830.1|	-	6.4e-30	102.7	0.3	1.4e-29	101.6	0.2	1.6	1	0	0	1	1	1	1	Alpha-amylase,	C	terminal
Alpha-amylase	PF00128.19	gi|15921161|ref|NP_376830.1|	-	6.9e-11	42.1	0.1	5.4e-10	39.1	0.1	2.0	1	1	0	1	1	1	1	Alpha	amylase,	catalytic	domain
CBM_48	PF02922.13	gi|15921162|ref|NP_376831.1|	-	3e-20	72.0	0.0	8.9e-20	70.5	0.0	1.9	1	0	0	1	1	1	1	Carbohydrate-binding	module	48	(Isoamylase	N-terminal	domain)
Alpha-amylase	PF00128.19	gi|15921162|ref|NP_376831.1|	-	1.7e-19	70.3	0.0	1.4e-17	64.1	0.0	2.4	1	1	0	1	1	1	1	Alpha	amylase,	catalytic	domain
UBN2_2	PF14227.1	gi|15921162|ref|NP_376831.1|	-	0.12	11.9	0.0	0.3	10.6	0.0	1.6	1	0	0	1	1	1	0	gag-polypeptide	of	LTR	copia-type
DUF1953	PF09196.5	gi|15921163|ref|NP_376832.1|	-	2e-36	123.5	2.8	5e-36	122.2	1.9	1.8	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1953)
Alpha-amylase	PF00128.19	gi|15921163|ref|NP_376832.1|	-	1.1e-25	90.6	11.9	5.5e-25	88.4	2.6	3.0	1	1	0	2	2	2	2	Alpha	amylase,	catalytic	domain
Amidohydro_2	PF04909.9	gi|15921164|ref|NP_376833.1|	-	1.4e-06	28.0	0.0	1.9e-06	27.6	0.0	1.2	1	0	0	1	1	1	1	Amidohydrolase
DUF2569	PF10754.4	gi|15921165|ref|NP_376834.1|	-	0.015	15.5	7.2	0.015	15.5	5.0	2.1	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2569)
Baculo_11_kDa	PF06143.6	gi|15921165|ref|NP_376834.1|	-	0.026	13.9	0.1	0.026	13.9	0.0	2.6	3	0	0	3	3	3	0	Baculovirus	11	kDa	family
ABC2_membrane_5	PF13346.1	gi|15921165|ref|NP_376834.1|	-	1.7	7.9	29.7	2.3	7.4	20.6	1.1	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
Yip1	PF04893.12	gi|15921165|ref|NP_376834.1|	-	9.1	5.7	33.4	4.4	6.7	18.9	2.1	1	1	1	2	2	2	0	Yip1	domain
Sep15_SelM	PF08806.6	gi|15921166|ref|NP_376835.1|	-	0.053	13.2	0.0	0.14	11.9	0.0	1.7	1	0	0	1	1	1	0	Sep15/SelM	redox	domain
Peptidase_S66	PF02016.10	gi|15921166|ref|NP_376835.1|	-	0.1	11.5	0.0	0.18	10.6	0.0	1.4	1	0	0	1	1	1	0	LD-carboxypeptidase
MFS_1	PF07690.11	gi|15921168|ref|NP_376837.1|	-	2e-22	79.4	42.0	8.6e-13	47.7	9.5	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|15921168|ref|NP_376837.1|	-	8.1e-09	34.5	34.2	0.00014	20.5	12.1	2.3	1	1	1	2	2	2	2	Sugar	(and	other)	transporter
DUF1705	PF08019.7	gi|15921168|ref|NP_376837.1|	-	0.027	13.9	8.4	0.036	13.5	1.2	2.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1705)
Polysacc_synt_C	PF14667.1	gi|15921169|ref|NP_376838.1|	-	0.024	14.4	0.1	0.036	13.8	0.1	1.3	1	0	0	1	1	1	0	Polysaccharide	biosynthesis	C-terminal	domain
FA_hydroxylase	PF04116.8	gi|15921169|ref|NP_376838.1|	-	0.25	11.7	2.4	0.34	11.3	1.6	1.2	1	0	0	1	1	1	0	Fatty	acid	hydroxylase	superfamily
TatD_DNase	PF01026.16	gi|15921170|ref|NP_376839.1|	-	2.2e-40	138.5	0.7	4.3e-40	137.5	0.5	1.4	1	1	0	1	1	1	1	TatD	related	DNase
DUF3996	PF13161.1	gi|15921170|ref|NP_376839.1|	-	0.062	12.9	0.0	0.27	10.8	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3996)
adh_short	PF00106.20	gi|15921171|ref|NP_376840.1|	-	1.8e-21	76.7	0.0	5.9e-21	75.0	0.0	1.7	1	1	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|15921171|ref|NP_376840.1|	-	1.6e-17	64.1	0.6	2.4e-17	63.5	0.4	1.2	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
Epimerase	PF01370.16	gi|15921171|ref|NP_376840.1|	-	5e-06	26.1	0.3	9.6e-06	25.1	0.2	1.7	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
NAD_binding_10	PF13460.1	gi|15921171|ref|NP_376840.1|	-	5.8e-05	23.1	0.1	0.00017	21.6	0.1	1.9	1	1	0	1	1	1	1	NADH(P)-binding
THF_DHG_CYH_C	PF02882.14	gi|15921171|ref|NP_376840.1|	-	0.0032	16.5	0.1	0.0058	15.7	0.0	1.4	1	0	0	1	1	1	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
KR	PF08659.5	gi|15921171|ref|NP_376840.1|	-	0.0037	16.9	0.1	0.21	11.2	0.1	2.5	1	1	0	1	1	1	1	KR	domain
Eno-Rase_NADH_b	PF12242.3	gi|15921171|ref|NP_376840.1|	-	0.097	12.4	0.3	0.24	11.2	0.2	1.7	1	0	0	1	1	1	0	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
Kelch_1	PF01344.20	gi|15921172|ref|NP_376841.1|	-	7.7e-24	82.9	31.9	1.2e-07	31.1	0.0	6.7	6	0	0	6	6	6	5	Kelch	motif
Kelch_6	PF13964.1	gi|15921172|ref|NP_376841.1|	-	2.2e-20	71.9	32.3	9.1e-07	28.7	0.8	6.9	3	1	3	6	6	6	5	Kelch	motif
Kelch_4	PF13418.1	gi|15921172|ref|NP_376841.1|	-	4.5e-17	61.5	20.9	9e-06	25.3	0.0	6.5	6	0	0	6	6	6	4	Galactose	oxidase,	central	domain
Kelch_3	PF13415.1	gi|15921172|ref|NP_376841.1|	-	1.9e-14	53.3	14.6	4.4e-06	26.6	0.1	6.8	6	0	0	6	6	6	2	Galactose	oxidase,	central	domain
fn3	PF00041.16	gi|15921172|ref|NP_376841.1|	-	4.9e-12	45.8	16.5	9.7e-07	28.8	1.6	4.4	4	1	0	4	4	4	2	Fibronectin	type	III	domain
Kelch_2	PF07646.10	gi|15921172|ref|NP_376841.1|	-	2.6e-09	36.4	16.6	0.37	10.6	0.0	6.8	6	0	0	6	6	6	4	Kelch	motif
Kelch_5	PF13854.1	gi|15921172|ref|NP_376841.1|	-	3.1e-09	36.5	30.4	0.0011	18.8	0.5	6.6	6	0	0	6	6	6	4	Kelch	motif
STT3	PF02516.9	gi|15921173|ref|NP_376842.1|	-	8.1e-19	67.9	35.8	8.1e-19	67.9	24.8	2.0	2	0	0	2	2	2	1	Oligosaccharyl	transferase	STT3	subunit
Nop10p	PF04135.7	gi|15921174|ref|NP_376843.1|	-	2.2e-27	94.5	0.9	2.4e-27	94.4	0.6	1.0	1	0	0	1	1	1	1	Nucleolar	RNA-binding	protein,	Nop10p	family
RecR	PF02132.10	gi|15921174|ref|NP_376843.1|	-	0.0065	15.8	0.6	0.008	15.5	0.4	1.2	1	0	0	1	1	1	1	RecR	protein
Auto_anti-p27	PF06677.7	gi|15921174|ref|NP_376843.1|	-	0.12	12.1	0.3	0.12	12.1	0.2	1.7	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
EIF_2_alpha	PF07541.7	gi|15921175|ref|NP_376844.1|	-	7e-31	106.2	1.6	1e-30	105.7	0.1	2.0	2	0	0	2	2	2	1	Eukaryotic	translation	initiation	factor	2	alpha	subunit
S1	PF00575.18	gi|15921175|ref|NP_376844.1|	-	1e-13	51.1	1.9	1.6e-13	50.4	0.1	2.3	2	0	0	2	2	2	1	S1	RNA	binding	domain
Ribosomal_S27e	PF01667.12	gi|15921176|ref|NP_376845.1|	-	4e-22	77.5	1.4	4.5e-22	77.3	1.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S27
TF_Zn_Ribbon	PF08271.7	gi|15921176|ref|NP_376845.1|	-	4.6e-05	22.6	0.8	7.2e-05	22.0	0.6	1.3	1	0	0	1	1	1	1	TFIIB	zinc-binding
zf-ribbon_3	PF13248.1	gi|15921176|ref|NP_376845.1|	-	0.00015	20.8	4.3	0.037	13.2	0.8	2.3	1	1	1	2	2	2	2	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|15921176|ref|NP_376845.1|	-	0.0012	18.2	5.7	0.011	15.1	3.8	2.2	1	1	1	2	2	2	2	zinc-ribbon	domain
DUF35_N	PF12172.3	gi|15921176|ref|NP_376845.1|	-	0.0016	18.2	0.9	0.29	11.1	0.2	2.2	2	0	0	2	2	2	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Zn_Tnp_IS1595	PF12760.2	gi|15921176|ref|NP_376845.1|	-	0.0035	17.1	0.8	0.0052	16.5	0.5	1.3	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
Zn-ribbon_8	PF09723.5	gi|15921176|ref|NP_376845.1|	-	0.004	17.0	0.6	0.0072	16.2	0.4	1.4	1	0	0	1	1	1	1	Zinc	ribbon	domain
TFIIS_C	PF01096.13	gi|15921176|ref|NP_376845.1|	-	0.004	16.7	3.1	0.23	11.1	2.2	2.2	1	1	0	1	1	1	1	Transcription	factor	S-II	(TFIIS)
DNA_RNApol_7kD	PF03604.8	gi|15921176|ref|NP_376845.1|	-	0.0044	16.4	3.6	0.082	12.3	2.4	2.2	1	1	1	2	2	2	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
Lar_restr_allev	PF14354.1	gi|15921176|ref|NP_376845.1|	-	0.0059	16.8	0.2	0.0073	16.5	0.1	1.3	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
IBR	PF01485.16	gi|15921176|ref|NP_376845.1|	-	0.0077	16.0	0.4	0.0087	15.9	0.2	1.1	1	0	0	1	1	1	1	IBR	domain
zf-ISL3	PF14690.1	gi|15921176|ref|NP_376845.1|	-	0.0084	16.1	1.1	1.6	8.8	0.1	2.1	2	0	0	2	2	2	1	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
DNA_ligase_ZBD	PF03119.11	gi|15921176|ref|NP_376845.1|	-	0.01	15.5	2.6	0.34	10.6	0.0	2.2	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zinc_ribbon_5	PF13719.1	gi|15921176|ref|NP_376845.1|	-	0.011	15.3	2.4	0.26	10.9	0.4	2.5	2	1	0	2	2	2	0	zinc-ribbon	domain
HypA	PF01155.14	gi|15921176|ref|NP_376845.1|	-	0.011	15.4	0.1	0.012	15.3	0.0	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zinc_ribbon_6	PF14599.1	gi|15921176|ref|NP_376845.1|	-	0.014	15.1	0.2	0.018	14.7	0.1	1.2	1	0	0	1	1	1	0	Zinc-ribbon
DUF3797	PF12677.2	gi|15921176|ref|NP_376845.1|	-	0.015	14.8	2.6	0.17	11.5	0.7	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3797)
zf-C4_Topoisom	PF01396.14	gi|15921176|ref|NP_376845.1|	-	0.016	14.6	2.0	1.4	8.4	0.1	2.2	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
zf-LSD1	PF06943.7	gi|15921176|ref|NP_376845.1|	-	0.018	14.6	3.3	0.15	11.6	0.4	2.4	2	0	0	2	2	2	0	LSD1	zinc	finger
DZR	PF12773.2	gi|15921176|ref|NP_376845.1|	-	0.022	14.5	1.3	0.047	13.5	0.9	1.6	1	1	0	1	1	1	0	Double	zinc	ribbon
Zn_Tnp_IS1	PF03811.8	gi|15921176|ref|NP_376845.1|	-	0.024	14.1	2.8	0.51	9.8	2.0	2.1	1	1	1	2	2	2	0	InsA	N-terminal	domain
A2L_zn_ribbon	PF08792.5	gi|15921176|ref|NP_376845.1|	-	0.051	13.0	0.1	2.1	7.9	0.0	2.2	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
DUF951	PF06107.6	gi|15921176|ref|NP_376845.1|	-	0.053	13.0	0.5	7	6.2	0.1	2.2	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF951)
zinc_ribbon_4	PF13717.1	gi|15921176|ref|NP_376845.1|	-	0.067	12.9	4.4	0.47	10.1	0.4	2.5	1	1	1	2	2	2	0	zinc-ribbon	domain
RNA_pol_N	PF01194.12	gi|15921176|ref|NP_376845.1|	-	0.096	12.7	2.6	0.12	12.4	0.1	2.0	2	0	0	2	2	2	0	RNA	polymerases	N	/	8	kDa	subunit
OrfB_Zn_ribbon	PF07282.6	gi|15921176|ref|NP_376845.1|	-	0.11	12.1	0.2	0.14	11.8	0.1	1.2	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
zf-HIT	PF04438.11	gi|15921176|ref|NP_376845.1|	-	0.12	12.0	0.6	5.5	6.7	0.1	2.1	2	0	0	2	2	2	0	HIT	zinc	finger
Nudix_N_2	PF14803.1	gi|15921176|ref|NP_376845.1|	-	0.14	11.9	0.4	7	6.4	0.0	2.3	2	0	0	2	2	2	0	Nudix	N-terminal
zf-NADH-PPase	PF09297.6	gi|15921176|ref|NP_376845.1|	-	0.15	11.5	3.1	3.1	7.4	0.5	2.2	1	1	1	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
PADR1	PF08063.7	gi|15921176|ref|NP_376845.1|	-	0.16	11.3	2.1	0.34	10.3	0.6	1.8	1	1	1	2	2	2	0	PADR1	(NUC008)	domain
CpXC	PF14353.1	gi|15921176|ref|NP_376845.1|	-	0.18	11.7	1.7	1.1	9.2	0.1	2.0	1	1	1	2	2	2	0	CpXC	protein
zf-trcl	PF13451.1	gi|15921176|ref|NP_376845.1|	-	0.28	10.8	2.1	10	5.8	0.1	2.1	1	1	1	2	2	2	0	Probable	zinc-binding	domain
Sgf11	PF08209.6	gi|15921176|ref|NP_376845.1|	-	0.54	9.6	2.2	3.7	6.9	0.2	2.1	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
Mu-like_Com	PF10122.4	gi|15921176|ref|NP_376845.1|	-	0.85	8.7	4.6	0.61	9.1	0.3	2.1	1	1	1	2	2	2	0	Mu-like	prophage	protein	Com
UPF0547	PF10571.4	gi|15921176|ref|NP_376845.1|	-	2.7	7.7	5.6	13	5.6	3.8	2.0	1	1	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
DUF1610	PF07754.6	gi|15921176|ref|NP_376845.1|	-	4.3	7.5	9.2	7	6.8	3.2	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
Ribosomal_L44	PF00935.14	gi|15921177|ref|NP_376846.1|	-	3.9e-30	103.6	8.3	3.9e-30	103.6	5.8	1.4	1	1	1	2	2	2	1	Ribosomal	protein	L44
zf-ribbon_3	PF13248.1	gi|15921177|ref|NP_376846.1|	-	0.015	14.4	0.5	4.1	6.7	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|15921177|ref|NP_376846.1|	-	0.015	14.7	3.3	1.5	8.3	0.5	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
DNA_RNApol_7kD	PF03604.8	gi|15921177|ref|NP_376846.1|	-	0.028	13.8	0.6	0.15	11.5	0.0	2.2	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
PyrI_C	PF02748.10	gi|15921177|ref|NP_376846.1|	-	0.028	13.8	0.8	0.095	12.1	0.1	1.9	2	0	0	2	2	2	0	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
DUF2082	PF09855.4	gi|15921177|ref|NP_376846.1|	-	0.033	14.0	1.0	1.3	8.8	0.0	2.2	2	0	0	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
zf-ISL3	PF14690.1	gi|15921177|ref|NP_376846.1|	-	0.063	13.3	1.8	1.6	8.8	0.4	2.4	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
RNA_POL_M_15KD	PF02150.11	gi|15921177|ref|NP_376846.1|	-	0.082	12.6	0.4	4.8	6.9	0.1	2.2	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
zf-TFIIB	PF13453.1	gi|15921177|ref|NP_376846.1|	-	0.1	11.7	0.2	2.5	7.3	0.0	2.2	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
zf-UBR	PF02207.15	gi|15921177|ref|NP_376846.1|	-	0.11	12.1	1.5	3.9	7.2	0.1	2.1	2	0	0	2	2	2	0	Putative	zinc	finger	in	N-recognin	(UBR	box)
Lar_restr_allev	PF14354.1	gi|15921177|ref|NP_376846.1|	-	0.13	12.5	0.7	1.3	9.3	0.5	2.0	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
Ribosomal_L33	PF00471.15	gi|15921177|ref|NP_376846.1|	-	0.15	12.3	1.1	0.15	12.3	0.7	2.8	2	1	1	3	3	3	0	Ribosomal	protein	L33
DZR	PF12773.2	gi|15921177|ref|NP_376846.1|	-	0.19	11.5	4.1	0.62	9.9	2.9	1.8	1	1	0	1	1	1	0	Double	zinc	ribbon
Mu-like_Com	PF10122.4	gi|15921177|ref|NP_376846.1|	-	0.22	10.6	2.5	6.1	5.9	0.2	2.2	2	0	0	2	2	2	0	Mu-like	prophage	protein	Com
Cys_rich_KTR	PF14205.1	gi|15921177|ref|NP_376846.1|	-	0.23	10.9	2.1	0.94	8.9	0.1	2.2	2	0	0	2	2	2	0	Cysteine-rich	KTR
zinc_ribbon_4	PF13717.1	gi|15921177|ref|NP_376846.1|	-	0.27	10.9	4.8	2	8.2	0.2	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|15921177|ref|NP_376846.1|	-	0.27	10.8	4.7	2.4	7.8	0.1	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
TFIIS_C	PF01096.13	gi|15921177|ref|NP_376846.1|	-	0.29	10.7	4.0	3.4	7.3	0.3	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
OrfB_Zn_ribbon	PF07282.6	gi|15921177|ref|NP_376846.1|	-	0.31	10.7	3.9	0.58	9.8	0.1	2.3	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
Auto_anti-p27	PF06677.7	gi|15921177|ref|NP_376846.1|	-	0.45	10.3	3.3	15	5.4	0.3	2.4	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
Ribosomal_L34e	PF01199.13	gi|15921177|ref|NP_376846.1|	-	2.8	8.2	8.0	1.5	9.1	0.9	2.0	1	1	1	2	2	2	0	Ribosomal	protein	L34e
TetR	PF13972.1	gi|15921178|ref|NP_376847.1|	-	0.051	13.0	0.3	0.11	11.8	0.2	1.5	1	1	0	1	1	1	0	Bacterial	transcriptional	repressor
DUF573	PF04504.9	gi|15921178|ref|NP_376847.1|	-	0.11	12.8	0.3	0.2	11.9	0.2	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF573
DUF2115	PF09888.4	gi|15921178|ref|NP_376847.1|	-	0.22	11.6	1.3	0.28	11.2	0.9	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2115)
Ribosomal_L29	PF00831.18	gi|15921178|ref|NP_376847.1|	-	0.6	9.8	4.0	0.56	9.9	1.3	2.1	1	1	1	2	2	2	0	Ribosomal	L29	protein
Epsilon_antitox	PF08998.6	gi|15921178|ref|NP_376847.1|	-	1.1	9.3	5.4	1	9.3	0.3	2.4	1	1	1	2	2	2	0	Bacterial	epsilon	antitoxin
DNA_primase_S	PF01896.14	gi|15921179|ref|NP_376848.1|	-	3.3e-16	59.3	0.0	1e-15	57.8	0.0	1.8	1	1	0	1	1	1	1	Eukaryotic	and	archaeal	DNA	primase	small	subunit
PCNA_N	PF00705.13	gi|15921180|ref|NP_376849.1|	-	1e-12	47.6	0.0	1.7e-12	46.9	0.0	1.4	1	0	0	1	1	1	1	Proliferating	cell	nuclear	antigen,	N-terminal	domain
PCNA_C	PF02747.10	gi|15921180|ref|NP_376849.1|	-	9.5e-08	32.0	0.9	2.2e-05	24.3	0.0	3.3	2	1	1	3	3	3	1	Proliferating	cell	nuclear	antigen,	C-terminal	domain
Rad1	PF02144.11	gi|15921180|ref|NP_376849.1|	-	9.9e-06	24.5	0.1	0.013	14.2	0.0	2.1	1	1	1	2	2	2	2	Repair	protein	Rad1/Rec1/Rad17
Rad9	PF04139.8	gi|15921180|ref|NP_376849.1|	-	0.00084	18.5	0.0	0.0015	17.6	0.0	1.3	1	1	0	1	1	1	1	Rad9
DUF4369	PF14289.1	gi|15921180|ref|NP_376849.1|	-	0.21	11.6	1.7	6.9	6.7	1.2	2.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4369)
ATP_bind_1	PF03029.12	gi|15921181|ref|NP_376850.1|	-	5.5e-55	186.4	0.0	6.2e-55	186.3	0.0	1.0	1	0	0	1	1	1	1	Conserved	hypothetical	ATP	binding	protein
AAA_17	PF13207.1	gi|15921181|ref|NP_376850.1|	-	8e-06	26.6	0.1	1.5e-05	25.8	0.1	1.8	1	1	0	1	1	1	1	AAA	domain
PduV-EutP	PF10662.4	gi|15921181|ref|NP_376850.1|	-	1.7e-05	24.2	0.0	0.014	14.8	0.0	3.1	2	1	0	3	3	3	1	Ethanolamine	utilisation	-	propanediol	utilisation
SRP54	PF00448.17	gi|15921181|ref|NP_376850.1|	-	0.00011	21.7	0.0	0.0058	16.1	0.0	2.2	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
AAA_18	PF13238.1	gi|15921181|ref|NP_376850.1|	-	0.00013	22.3	0.1	0.0003	21.0	0.1	1.8	1	1	0	1	1	1	1	AAA	domain
CbiA	PF01656.18	gi|15921181|ref|NP_376850.1|	-	0.00021	20.7	0.2	0.00055	19.4	0.1	1.7	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_16	PF13191.1	gi|15921181|ref|NP_376850.1|	-	0.0003	20.8	0.0	0.00043	20.3	0.0	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_10	PF12846.2	gi|15921181|ref|NP_376850.1|	-	0.00062	19.2	0.0	0.0017	17.8	0.0	1.5	1	1	0	1	1	1	1	AAA-like	domain
Septin	PF00735.13	gi|15921181|ref|NP_376850.1|	-	0.00067	18.7	0.2	0.27	10.2	0.1	2.6	2	1	0	2	2	2	1	Septin
DUF87	PF01935.12	gi|15921181|ref|NP_376850.1|	-	0.00068	19.5	0.0	0.0017	18.2	0.0	1.7	1	1	0	1	1	1	1	Domain	of	unknown	function	DUF87
AAA_24	PF13479.1	gi|15921181|ref|NP_376850.1|	-	0.00086	18.9	0.0	0.0013	18.3	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
GTP_EFTU	PF00009.22	gi|15921181|ref|NP_376850.1|	-	0.00087	18.7	0.0	0.18	11.2	0.0	2.7	2	1	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
NACHT	PF05729.7	gi|15921181|ref|NP_376850.1|	-	0.0014	18.3	0.0	0.0031	17.1	0.0	1.6	1	0	0	1	1	1	1	NACHT	domain
AAA_22	PF13401.1	gi|15921181|ref|NP_376850.1|	-	0.0024	18.0	0.1	0.015	15.4	0.1	2.3	1	1	0	1	1	1	1	AAA	domain
MMR_HSR1	PF01926.18	gi|15921181|ref|NP_376850.1|	-	0.0027	17.6	0.0	0.0085	16.0	0.0	1.8	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
cobW	PF02492.14	gi|15921181|ref|NP_376850.1|	-	0.003	17.0	0.0	0.038	13.4	0.0	2.2	2	1	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
MobB	PF03205.9	gi|15921181|ref|NP_376850.1|	-	0.004	16.8	0.0	0.0074	15.9	0.0	1.5	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
G-alpha	PF00503.15	gi|15921181|ref|NP_376850.1|	-	0.0065	15.2	0.0	0.013	14.2	0.0	1.4	1	0	0	1	1	1	1	G-protein	alpha	subunit
AAA_28	PF13521.1	gi|15921181|ref|NP_376850.1|	-	0.007	16.3	0.1	0.014	15.3	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|15921181|ref|NP_376850.1|	-	0.0076	16.1	0.1	0.024	14.5	0.0	1.9	1	1	0	2	2	2	1	AAA	domain
KAP_NTPase	PF07693.9	gi|15921181|ref|NP_376850.1|	-	0.0091	15.0	0.1	0.02	13.9	0.0	1.6	1	1	1	2	2	2	1	KAP	family	P-loop	domain
RNA_helicase	PF00910.17	gi|15921181|ref|NP_376850.1|	-	0.01	16.0	0.0	0.19	11.8	0.0	2.5	2	0	0	2	2	2	0	RNA	helicase
FeoB_N	PF02421.13	gi|15921181|ref|NP_376850.1|	-	0.013	14.8	0.0	0.37	10.0	0.0	2.6	3	0	0	3	3	3	0	Ferrous	iron	transport	protein	B
KTI12	PF08433.5	gi|15921181|ref|NP_376850.1|	-	0.013	14.7	0.0	0.033	13.3	0.0	1.7	2	0	0	2	2	1	0	Chromatin	associated	protein	KTI12
ArgK	PF03308.11	gi|15921181|ref|NP_376850.1|	-	0.015	14.0	0.0	0.056	12.2	0.0	1.8	2	0	0	2	2	2	0	ArgK	protein
ABC_tran	PF00005.22	gi|15921181|ref|NP_376850.1|	-	0.02	15.2	0.1	0.029	14.6	0.0	1.5	1	1	0	1	1	1	0	ABC	transporter
NTPase_1	PF03266.10	gi|15921181|ref|NP_376850.1|	-	0.021	14.5	0.6	0.11	12.1	0.1	2.4	2	1	0	2	2	2	0	NTPase
Viral_helicase1	PF01443.13	gi|15921181|ref|NP_376850.1|	-	0.023	14.2	0.0	0.046	13.2	0.0	1.5	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
Miro	PF08477.8	gi|15921181|ref|NP_376850.1|	-	0.028	14.9	0.0	0.3	11.5	0.0	2.3	2	0	0	2	2	2	0	Miro-like	protein
DUF258	PF03193.11	gi|15921181|ref|NP_376850.1|	-	0.029	13.5	0.0	0.23	10.6	0.0	2.3	2	1	0	2	2	1	0	Protein	of	unknown	function,	DUF258
Arch_ATPase	PF01637.13	gi|15921181|ref|NP_376850.1|	-	0.031	13.9	0.6	0.066	12.9	0.0	1.9	2	0	0	2	2	2	0	Archaeal	ATPase
AAA_29	PF13555.1	gi|15921181|ref|NP_376850.1|	-	0.037	13.5	0.1	0.13	11.8	0.0	1.9	2	0	0	2	2	1	0	P-loop	containing	region	of	AAA	domain
SRPRB	PF09439.5	gi|15921181|ref|NP_376850.1|	-	0.049	12.8	0.1	4.9	6.3	0.0	2.1	2	0	0	2	2	2	0	Signal	recognition	particle	receptor	beta	subunit
ArsA_ATPase	PF02374.10	gi|15921181|ref|NP_376850.1|	-	0.05	12.6	0.0	0.11	11.4	0.0	1.5	1	1	0	1	1	1	0	Anion-transporting	ATPase
AAA_30	PF13604.1	gi|15921181|ref|NP_376850.1|	-	0.052	13.1	0.0	0.095	12.2	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
NB-ARC	PF00931.17	gi|15921181|ref|NP_376850.1|	-	0.06	12.1	0.0	0.11	11.3	0.0	1.4	1	0	0	1	1	1	0	NB-ARC	domain
T2SE	PF00437.15	gi|15921181|ref|NP_376850.1|	-	0.069	12.0	0.0	0.1	11.4	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
Arf	PF00025.16	gi|15921181|ref|NP_376850.1|	-	0.081	12.1	0.0	0.29	10.3	0.0	1.8	2	0	0	2	2	2	0	ADP-ribosylation	factor	family
APS_kinase	PF01583.15	gi|15921181|ref|NP_376850.1|	-	0.11	12.1	0.0	0.2	11.2	0.0	1.4	1	0	0	1	1	1	0	Adenylylsulphate	kinase
TrwB_AAD_bind	PF10412.4	gi|15921181|ref|NP_376850.1|	-	0.11	11.0	0.0	0.2	10.2	0.0	1.3	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA_5	PF07728.9	gi|15921181|ref|NP_376850.1|	-	0.13	12.0	0.0	0.25	11.0	0.0	1.6	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_19	PF13245.1	gi|15921181|ref|NP_376850.1|	-	0.17	11.6	0.0	0.32	10.7	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
Pribosyltran_N	PF13793.1	gi|15921182|ref|NP_376851.1|	-	1.2e-27	95.9	0.1	7.3e-25	86.9	0.0	2.5	2	1	0	2	2	2	2	N-terminal	domain	of	ribose	phosphate	pyrophosphokinase
Pribosyltran	PF00156.22	gi|15921182|ref|NP_376851.1|	-	4e-19	68.5	0.4	1.2e-18	67.0	0.1	1.8	2	0	0	2	2	2	1	Phosphoribosyl	transferase	domain
Pribosyl_synth	PF14572.1	gi|15921182|ref|NP_376851.1|	-	5.4e-13	49.1	2.1	1e-12	48.1	1.0	1.8	1	1	1	2	2	2	1	Phosphoribosyl	synthetase-associated	domain
UPRTase	PF14681.1	gi|15921182|ref|NP_376851.1|	-	2.9e-06	26.6	0.8	2.3e-05	23.6	0.1	2.3	2	1	0	2	2	2	1	Uracil	phosphoribosyltransferase
PRTase_2	PF15609.1	gi|15921182|ref|NP_376851.1|	-	0.0016	17.8	0.1	0.0034	16.6	0.0	1.5	1	1	0	1	1	1	1	Phosphoribosyl	transferase
SRP54	PF00448.17	gi|15921182|ref|NP_376851.1|	-	0.022	14.2	0.0	0.069	12.5	0.0	1.8	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
DltD_C	PF04914.7	gi|15921182|ref|NP_376851.1|	-	0.096	12.5	0.0	0.4	10.5	0.0	2.0	1	1	1	2	2	2	0	DltD	C-terminal	region
UPF0020	PF01170.13	gi|15921183|ref|NP_376852.1|	-	1.4e-28	99.6	0.0	2.1e-28	99.1	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_26	PF13659.1	gi|15921183|ref|NP_376852.1|	-	9.9e-11	41.7	0.0	1.9e-10	40.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
N6_N4_Mtase	PF01555.13	gi|15921183|ref|NP_376852.1|	-	4.1e-09	36.2	0.5	9.1e-07	28.5	0.0	2.8	3	0	0	3	3	3	1	DNA	methylase
Methyltransf_31	PF13847.1	gi|15921183|ref|NP_376852.1|	-	7.1e-07	28.9	0.1	4.5e-06	26.3	0.0	2.1	2	1	1	3	3	3	1	Methyltransferase	domain
MethyltransfD12	PF02086.10	gi|15921183|ref|NP_376852.1|	-	0.0019	17.7	0.2	0.0073	15.7	0.0	2.2	2	1	0	2	2	2	1	D12	class	N6	adenine-specific	DNA	methyltransferase
Cons_hypoth95	PF03602.10	gi|15921183|ref|NP_376852.1|	-	0.0035	16.7	0.0	0.0066	15.8	0.0	1.4	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
MTS	PF05175.9	gi|15921183|ref|NP_376852.1|	-	0.011	15.1	0.0	0.067	12.5	0.0	1.9	1	1	1	2	2	2	0	Methyltransferase	small	domain
Methyltransf_15	PF09445.5	gi|15921183|ref|NP_376852.1|	-	0.016	14.7	0.0	0.26	10.8	0.0	2.1	2	0	0	2	2	2	0	RNA	cap	guanine-N2	methyltransferase
Methyltransf_11	PF08241.7	gi|15921183|ref|NP_376852.1|	-	0.11	13.0	0.0	0.21	12.0	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
Lactamase_B_2	PF12706.2	gi|15921184|ref|NP_376853.1|	-	3.7e-27	95.1	0.0	5.7e-27	94.5	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|15921184|ref|NP_376853.1|	-	8.9e-12	45.0	0.0	1.8e-09	37.5	0.0	2.2	2	0	0	2	2	2	2	Metallo-beta-lactamase	superfamily
Lactamase_B_4	PF13691.1	gi|15921184|ref|NP_376853.1|	-	0.0011	18.4	0.0	0.0023	17.3	0.0	1.5	1	0	0	1	1	1	1	tRNase	Z	endonuclease
RNA_binding	PF01877.12	gi|15921185|ref|NP_376854.1|	-	1.9e-31	108.5	1.6	2.2e-31	108.3	1.1	1.0	1	0	0	1	1	1	1	RNA	binding
AAA_18	PF13238.1	gi|15921186|ref|NP_376855.1|	-	8.1e-12	45.5	0.8	1.3e-11	44.9	0.6	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|15921186|ref|NP_376855.1|	-	2.1e-08	35.0	1.0	2.8e-08	34.6	0.7	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|15921186|ref|NP_376855.1|	-	0.00023	21.0	0.0	0.00043	20.1	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
ADK	PF00406.17	gi|15921186|ref|NP_376855.1|	-	0.00056	19.8	0.3	0.00078	19.3	0.2	1.5	1	1	0	1	1	1	1	Adenylate	kinase
Zeta_toxin	PF06414.7	gi|15921186|ref|NP_376855.1|	-	0.11	11.5	0.3	1.5	7.8	0.2	2.6	1	1	0	1	1	1	0	Zeta	toxin
LigT_PEase	PF02834.11	gi|15921187|ref|NP_376856.1|	-	7.9e-31	105.8	0.0	1.5e-15	56.9	0.0	2.0	2	0	0	2	2	2	2	LigT	like	Phosphoesterase
2_5_RNA_ligase2	PF13563.1	gi|15921187|ref|NP_376856.1|	-	8.9e-13	48.2	0.0	1e-12	48.0	0.0	1.1	1	0	0	1	1	1	1	2'-5'	RNA	ligase	superfamily
AKAP7_NLS	PF10469.4	gi|15921187|ref|NP_376856.1|	-	1.8e-11	44.1	0.0	2.7e-11	43.5	0.0	1.2	1	0	0	1	1	1	1	AKAP7	2'5'	RNA	ligase-like	domain
tRNA_NucTransf2	PF09249.6	gi|15921188|ref|NP_376857.1|	-	2.8e-45	152.8	0.0	5e-45	152.0	0.0	1.4	1	0	0	1	1	1	1	tRNA	nucleotidyltransferase,	second	domain
NTP_transf_2	PF01909.18	gi|15921188|ref|NP_376857.1|	-	2.2e-11	43.9	0.4	1e-10	41.8	0.3	2.1	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
DNA_pol_B_palm	PF14792.1	gi|15921188|ref|NP_376857.1|	-	0.0071	16.3	0.0	0.016	15.2	0.0	1.5	1	0	0	1	1	1	1	DNA	polymerase	beta	palm
RIO1	PF01163.17	gi|15921189|ref|NP_376858.1|	-	0.0075	15.6	0.2	0.019	14.3	0.2	1.6	1	1	0	1	1	1	1	RIO1	family
APH	PF01636.18	gi|15921189|ref|NP_376858.1|	-	0.014	15.1	0.0	1.1	8.9	0.0	2.1	2	0	0	2	2	2	0	Phosphotransferase	enzyme	family
SSV1_ORF_D-335	PF07935.6	gi|15921191|ref|NP_376860.1|	-	2.1e-21	75.4	0.1	2.8e-21	75.0	0.1	1.1	1	0	0	1	1	1	1	ORF	D-335-like	protein
pRN1_helical	PF13010.1	gi|15921192|ref|NP_376861.1|	-	3.4e-60	201.5	6.0	3.4e-60	201.5	4.1	4.0	5	0	0	5	5	5	1	Primase	helical	domain
Prim-Pol	PF09250.6	gi|15921192|ref|NP_376861.1|	-	6.4e-31	107.5	0.0	1.2e-30	106.6	0.0	1.4	1	0	0	1	1	1	1	Bifunctional	DNA	primase/polymerase,	N-terminal
D5_N	PF08706.6	gi|15921192|ref|NP_376861.1|	-	2e-13	50.6	8.1	2e-13	50.6	5.6	4.1	3	1	0	3	3	3	1	D5	N	terminal	like
HI0933_like	PF03486.9	gi|15921192|ref|NP_376861.1|	-	0.019	13.4	0.0	0.037	12.5	0.0	1.4	1	0	0	1	1	1	0	HI0933-like	protein
RFX_DNA_binding	PF02257.10	gi|15921192|ref|NP_376861.1|	-	0.026	14.6	0.0	0.088	12.9	0.0	1.8	1	0	0	1	1	1	0	RFX	DNA-binding	domain
FliG_N	PF14842.1	gi|15921192|ref|NP_376861.1|	-	0.034	14.2	0.5	0.14	12.2	0.1	2.3	2	0	0	2	2	2	0	FliG	N-terminal	domain
PTPlike_phytase	PF14566.1	gi|15921192|ref|NP_376861.1|	-	0.11	12.5	2.4	0.21	11.6	0.3	2.6	3	0	0	3	3	3	0	Inositol	hexakisphosphate
AAA_17	PF13207.1	gi|15921192|ref|NP_376861.1|	-	0.23	12.2	4.6	0.42	11.4	0.0	3.8	5	1	0	5	5	5	0	AAA	domain
zf-ZPR1	PF03367.8	gi|15921192|ref|NP_376861.1|	-	0.35	10.0	4.0	4.5	6.4	0.1	2.8	3	0	0	3	3	3	0	ZPR1	zinc-finger	domain
SapB_1	PF05184.10	gi|15921192|ref|NP_376861.1|	-	2.5	8.0	8.5	5.4	6.9	0.1	3.8	3	1	1	4	4	4	0	Saposin-like	type	B,	region	1
zf-CCHH	PF10283.4	gi|15921194|ref|NP_376863.1|	-	0.015	15.0	1.3	0.036	13.9	0.9	1.7	1	1	0	1	1	1	0	Zinc-finger	(CX5CX6HX5H)	motif
RHH_1	PF01402.16	gi|15921195|ref|NP_376864.1|	-	2e-06	27.4	3.0	3.2e-06	26.7	2.0	1.4	1	1	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
IF2_N	PF04760.10	gi|15921195|ref|NP_376864.1|	-	0.0016	18.0	3.7	0.049	13.2	2.5	2.1	1	1	0	1	1	1	1	Translation	initiation	factor	IF-2,	N-terminal	region
DUF2774	PF11242.3	gi|15921195|ref|NP_376864.1|	-	0.0046	16.8	0.1	0.0059	16.5	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2774)
HTH_10	PF04967.7	gi|15921195|ref|NP_376864.1|	-	0.017	14.7	0.4	4.7	6.8	0.0	2.2	1	1	1	2	2	2	0	HTH	DNA	binding	domain
HTH_6	PF01418.12	gi|15921195|ref|NP_376864.1|	-	0.018	14.7	0.1	0.12	12.1	0.0	1.9	1	1	0	1	1	1	0	Helix-turn-helix	domain,	rpiR	family
Rho_N	PF07498.7	gi|15921195|ref|NP_376864.1|	-	0.034	13.8	0.4	8.3	6.2	0.0	2.2	2	0	0	2	2	2	0	Rho	termination	factor,	N-terminal	domain
DUF3801	PF12687.2	gi|15921195|ref|NP_376864.1|	-	0.036	13.6	0.8	0.047	13.2	0.1	1.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3801)
Sigma70_r4	PF04545.11	gi|15921195|ref|NP_376864.1|	-	0.036	13.3	0.0	0.079	12.2	0.0	1.6	1	1	1	2	2	2	0	Sigma-70,	region	4
DUF2805	PF10985.3	gi|15921195|ref|NP_376864.1|	-	0.038	13.9	0.2	0.045	13.6	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2805)
Phage_terminase	PF10668.4	gi|15921195|ref|NP_376864.1|	-	0.065	13.0	0.5	0.66	9.8	0.1	2.0	1	1	1	2	2	2	0	Phage	terminase	small	subunit
Fe_dep_repress	PF01325.14	gi|15921195|ref|NP_376864.1|	-	0.07	13.0	0.1	0.086	12.7	0.1	1.3	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_7	PF02796.10	gi|15921195|ref|NP_376864.1|	-	0.071	12.9	0.1	7.8	6.4	0.0	2.1	1	1	1	2	2	2	0	Helix-turn-helix	domain	of	resolvase
RepB-RCR_reg	PF10723.4	gi|15921195|ref|NP_376864.1|	-	0.085	12.5	0.1	0.11	12.2	0.1	1.1	1	0	0	1	1	1	0	Replication	regulatory	protein	RepB
PRD	PF00874.15	gi|15921195|ref|NP_376864.1|	-	0.1	12.7	0.1	0.11	12.5	0.1	1.2	1	0	0	1	1	1	0	PRD	domain
HTH_3	PF01381.17	gi|15921195|ref|NP_376864.1|	-	0.12	12.2	0.7	7.6	6.4	0.1	2.1	1	1	1	2	2	2	0	Helix-turn-helix
Sec63	PF02889.11	gi|15921195|ref|NP_376864.1|	-	0.13	11.4	0.2	0.14	11.3	0.1	1.1	1	0	0	1	1	1	0	Sec63	Brl	domain
Methyltransf_11	PF08241.7	gi|15921195|ref|NP_376864.1|	-	0.14	12.6	0.0	0.25	11.8	0.0	1.4	1	1	0	1	1	1	0	Methyltransferase	domain
E3_binding	PF02817.12	gi|15921195|ref|NP_376864.1|	-	0.15	11.6	0.5	0.48	10.1	0.0	2.0	2	1	0	2	2	2	0	e3	binding	domain
Transcrip_reg	PF01709.15	gi|15921196|ref|NP_376865.1|	-	0.05	12.7	0.2	0.052	12.6	0.1	1.1	1	0	0	1	1	1	0	Transcriptional	regulator
Antitoxin-MazE	PF04014.13	gi|15921197|ref|NP_376866.1|	-	0.025	14.3	0.0	0.04	13.6	0.0	1.4	1	1	0	1	1	1	0	Antidote-toxin	recognition	MazE
zf-C2H2	PF00096.21	gi|15921199|ref|NP_376868.1|	-	4e-09	36.2	2.4	0.00013	22.1	0.2	2.3	2	0	0	2	2	2	2	Zinc	finger,	C2H2	type
zf-C2H2_6	PF13912.1	gi|15921199|ref|NP_376868.1|	-	1.2e-07	31.3	0.6	0.0052	16.6	0.2	2.3	2	0	0	2	2	2	2	C2H2-type	zinc	finger
zf-C2H2_4	PF13894.1	gi|15921199|ref|NP_376868.1|	-	3.8e-07	29.9	2.9	0.0033	17.6	0.1	2.3	2	0	0	2	2	2	2	C2H2-type	zinc	finger
zf-C2H2_2	PF12756.2	gi|15921199|ref|NP_376868.1|	-	4.1e-07	30.0	0.2	0.0024	17.9	0.0	2.3	1	1	1	2	2	2	2	C2H2	type	zinc-finger	(2	copies)
zf-Di19	PF05605.7	gi|15921199|ref|NP_376868.1|	-	2.8e-05	24.1	0.7	0.081	13.0	0.1	2.3	1	1	1	2	2	2	2	Drought	induced	19	protein	(Di19),	zinc-binding
zf-BED	PF02892.10	gi|15921199|ref|NP_376868.1|	-	0.00041	20.0	3.1	0.0048	16.6	1.0	2.3	1	1	1	2	2	2	1	BED	zinc	finger
zinc_ribbon_2	PF13240.1	gi|15921199|ref|NP_376868.1|	-	0.003	16.9	1.3	0.018	14.4	0.2	2.1	2	0	0	2	2	2	1	zinc-ribbon	domain
Prok-RING_1	PF14446.1	gi|15921199|ref|NP_376868.1|	-	0.0032	17.1	0.5	0.092	12.4	0.0	2.1	2	0	0	2	2	2	1	Prokaryotic	RING	finger	family	1
DUF629	PF04780.7	gi|15921199|ref|NP_376868.1|	-	0.0063	15.0	2.0	0.23	9.9	0.3	2.2	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF629)
zf-met	PF12874.2	gi|15921199|ref|NP_376868.1|	-	0.0069	16.5	0.2	0.2	11.8	0.0	2.5	2	0	0	2	2	2	1	Zinc-finger	of	C2H2	type
DUF2256	PF10013.4	gi|15921199|ref|NP_376868.1|	-	0.027	14.1	2.0	1	9.1	0.1	2.2	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2256)
HNH	PF01844.18	gi|15921199|ref|NP_376868.1|	-	0.13	12.1	3.3	0.54	10.1	0.6	2.2	2	0	0	2	2	2	0	HNH	endonuclease
DZR	PF12773.2	gi|15921199|ref|NP_376868.1|	-	0.14	11.9	0.3	0.54	10.1	0.2	1.5	1	1	0	1	1	1	0	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|15921199|ref|NP_376868.1|	-	0.2	10.8	3.1	1.3	8.3	2.2	2.0	1	1	0	1	1	1	0	zinc-ribbon	domain
zf-C2H2_jaz	PF12171.3	gi|15921199|ref|NP_376868.1|	-	0.29	11.3	0.1	0.29	11.3	0.1	2.7	2	1	1	3	3	3	0	Zinc-finger	double-stranded	RNA-binding
Rubredoxin	PF00301.15	gi|15921199|ref|NP_376868.1|	-	0.49	10.3	2.3	1.7	8.5	0.3	2.1	2	0	0	2	2	2	0	Rubredoxin
UPF0547	PF10571.4	gi|15921199|ref|NP_376868.1|	-	2.5	7.8	6.7	0.49	10.1	0.4	2.1	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
PX	PF00787.19	gi|15921200|ref|NP_376869.1|	-	0.13	12.0	0.2	0.33	10.7	0.0	1.8	2	0	0	2	2	2	0	PX	domain
PALP	PF00291.20	gi|15921201|ref|NP_376870.1|	-	2.8e-58	197.5	0.0	3.2e-58	197.3	0.0	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
DFP	PF04127.10	gi|15921201|ref|NP_376870.1|	-	0.038	13.6	0.2	0.068	12.7	0.2	1.3	1	0	0	1	1	1	0	DNA	/	pantothenate	metabolism	flavoprotein
CgtA	PF06306.6	gi|15921201|ref|NP_376870.1|	-	0.13	11.5	0.0	9.6	5.3	0.0	2.1	2	0	0	2	2	2	0	Beta-1,4-N-acetylgalactosaminyltransferase	(CgtA)
Baculo_11_kDa	PF06143.6	gi|15921202|ref|NP_376871.1|	-	0.11	11.8	0.6	0.27	10.6	0.4	1.6	1	0	0	1	1	1	0	Baculovirus	11	kDa	family
CoA_binding	PF02629.14	gi|15921203|ref|NP_376872.1|	-	3.6e-21	75.4	0.6	3.6e-21	75.4	0.4	2.7	2	1	0	2	2	2	1	CoA	binding	domain
Ligase_CoA	PF00549.14	gi|15921203|ref|NP_376872.1|	-	9e-15	54.5	1.6	1.5e-14	53.8	1.1	1.3	1	0	0	1	1	1	1	CoA-ligase
CoA_binding_2	PF13380.1	gi|15921203|ref|NP_376872.1|	-	1.3e-11	44.6	0.1	7.7e-11	42.1	0.0	2.1	2	0	0	2	2	2	1	CoA	binding	domain
Succ_CoA_lig	PF13607.1	gi|15921203|ref|NP_376872.1|	-	5.7e-09	35.6	0.1	8.5e-09	35.1	0.1	1.3	1	0	0	1	1	1	1	Succinyl-CoA	ligase	like	flavodoxin	domain
GFO_IDH_MocA	PF01408.17	gi|15921203|ref|NP_376872.1|	-	0.014	15.8	0.0	0.04	14.4	0.0	1.7	2	0	0	2	2	2	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
Radical_SAM	PF04055.16	gi|15921203|ref|NP_376872.1|	-	0.017	15.3	0.6	0.046	13.8	0.1	1.9	2	1	0	2	2	2	0	Radical	SAM	superfamily
ATP-grasp_2	PF08442.5	gi|15921204|ref|NP_376873.1|	-	1.7e-18	66.7	1.4	2.5e-18	66.2	0.2	1.8	2	1	0	2	2	2	1	ATP-grasp	domain
Ligase_CoA	PF00549.14	gi|15921204|ref|NP_376873.1|	-	5.7e-15	55.2	0.3	8.6e-15	54.6	0.2	1.2	1	0	0	1	1	1	1	CoA-ligase
HhH-GPD	PF00730.20	gi|15921205|ref|NP_376874.1|	-	1.8e-13	50.6	0.4	4e-13	49.5	0.1	1.7	2	0	0	2	2	2	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
HHH_5	PF14520.1	gi|15921205|ref|NP_376874.1|	-	1.1e-05	25.5	5.6	0.0002	21.4	2.5	3.2	2	1	0	2	2	2	1	Helix-hairpin-helix	domain
DUF4332	PF14229.1	gi|15921205|ref|NP_376874.1|	-	0.00078	19.4	0.2	0.013	15.4	0.4	2.5	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4332)
HHH_2	PF12826.2	gi|15921205|ref|NP_376874.1|	-	0.0016	18.2	0.5	0.15	11.9	0.0	3.4	3	0	0	3	3	3	1	Helix-hairpin-helix	motif
RAP	PF08373.5	gi|15921205|ref|NP_376874.1|	-	0.016	14.9	0.4	0.052	13.3	0.1	2.0	2	0	0	2	2	2	0	RAP	domain
EndIII_4Fe-2S	PF10576.4	gi|15921205|ref|NP_376874.1|	-	0.042	14.0	1.7	0.068	13.3	1.1	1.3	1	0	0	1	1	1	0	Iron-sulfur	binding	domain	of	endonuclease	III
HHH	PF00633.18	gi|15921205|ref|NP_376874.1|	-	0.12	12.1	3.4	0.19	11.5	0.1	2.9	3	0	0	3	3	3	0	Helix-hairpin-helix	motif
SelB-wing_2	PF09106.6	gi|15921205|ref|NP_376874.1|	-	0.13	12.1	0.6	1.2	9.0	0.1	2.5	2	0	0	2	2	2	0	Elongation	factor	SelB,	winged	helix
Ribosomal_S13	PF00416.17	gi|15921205|ref|NP_376874.1|	-	0.35	11.3	3.1	4.2	7.8	0.2	2.6	2	1	1	3	3	2	0	Ribosomal	protein	S13/S18
Arc_PepC	PF06819.6	gi|15921205|ref|NP_376874.1|	-	0.51	10.2	9.2	0.55	10.1	5.3	1.8	2	0	0	2	2	2	0	Archaeal	Peptidase	A24	C-terminal	Domain
SPOB_a	PF14689.1	gi|15921205|ref|NP_376874.1|	-	0.52	9.9	3.3	14	5.3	0.1	3.0	2	1	1	3	3	3	0	Sensor_kinase_SpoOB-type,	alpha-helical	domain
DUF3940	PF13076.1	gi|15921205|ref|NP_376874.1|	-	4.9	6.7	13.1	0.39	10.3	0.8	3.7	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF3940)
Glyco_tran_28_C	PF04101.11	gi|15921206|ref|NP_376875.1|	-	1.9e-11	43.9	0.1	2.2e-09	37.1	0.0	2.6	2	1	0	2	2	2	2	Glycosyltransferase	family	28	C-terminal	domain
Glyco_trans_1_3	PF13528.1	gi|15921206|ref|NP_376875.1|	-	7.1e-09	35.2	0.0	1.2e-08	34.5	0.0	1.6	1	1	0	1	1	1	1	Glycosyl	transferase	family	1
Alg14	PF08660.6	gi|15921206|ref|NP_376875.1|	-	2.3e-05	24.4	0.0	4.4e-05	23.5	0.0	1.5	1	0	0	1	1	1	1	Oligosaccharide	biosynthesis	protein	Alg14	like
Pyr_redox_2	PF07992.9	gi|15921206|ref|NP_376875.1|	-	0.078	12.8	0.0	0.095	12.5	0.0	1.3	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
tRNA-synt_2b	PF00587.20	gi|15921207|ref|NP_376876.1|	-	6.9e-39	133.1	0.1	1.3e-38	132.2	0.1	1.4	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|15921207|ref|NP_376876.1|	-	2.4e-21	75.4	1.9	5.5e-21	74.3	0.8	2.0	2	0	0	2	2	2	1	Anticodon	binding	domain
HGTP_anticodon2	PF12745.2	gi|15921207|ref|NP_376876.1|	-	0.012	14.7	1.2	0.019	14.1	0.8	1.2	1	0	0	1	1	1	0	Anticodon	binding	domain	of	tRNAs
DNA_binding_1	PF01035.15	gi|15921208|ref|NP_376877.1|	-	2.5e-25	88.0	0.0	3.2e-25	87.6	0.0	1.1	1	0	0	1	1	1	1	6-O-methylguanine	DNA	methyltransferase,	DNA	binding	domain
NTP_transferase	PF00483.18	gi|15921209|ref|NP_376878.1|	-	6.2e-34	117.3	0.0	8.6e-34	116.9	0.0	1.2	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|15921209|ref|NP_376878.1|	-	2.8e-09	37.2	0.0	3.7e-09	36.8	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.14	gi|15921209|ref|NP_376878.1|	-	0.00023	20.7	0.0	0.00032	20.2	0.0	1.2	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
DUF1035	PF06281.7	gi|15921210|ref|NP_376879.1|	-	3.1e-16	58.8	4.8	2.1e-15	56.2	3.3	1.8	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1035)
DUF788	PF05620.6	gi|15921210|ref|NP_376879.1|	-	0.058	13.2	0.5	0.074	12.9	0.4	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF788)
Pkr1	PF08636.5	gi|15921210|ref|NP_376879.1|	-	0.11	12.6	0.7	0.11	12.5	0.5	1.2	1	0	0	1	1	1	0	ER	protein	Pkr1
PaREP1	PF05942.6	gi|15921212|ref|NP_376881.1|	-	7.4e-15	54.8	0.8	1.2e-14	54.2	0.5	1.3	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
DUF357	PF04010.8	gi|15921212|ref|NP_376881.1|	-	0.00025	20.6	0.2	0.0007	19.2	0.1	1.9	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF357)
DUF4398	PF14346.1	gi|15921212|ref|NP_376881.1|	-	0.0019	18.2	0.3	0.0021	18.0	0.2	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4398)
HEPN	PF05168.9	gi|15921212|ref|NP_376881.1|	-	0.042	13.7	0.4	0.042	13.7	0.3	1.5	2	0	0	2	2	2	0	HEPN	domain
Glyco_transf_20	PF00982.16	gi|15921212|ref|NP_376881.1|	-	0.084	11.3	1.0	0.091	11.2	0.7	1.0	1	0	0	1	1	1	0	Glycosyltransferase	family	20
Pyr_redox_2	PF07992.9	gi|15921213|ref|NP_376882.1|	-	2.8e-11	43.6	0.0	1.1e-10	41.7	0.0	2.1	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|15921213|ref|NP_376882.1|	-	3e-05	24.3	2.2	0.19	12.1	0.2	2.5	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|15921213|ref|NP_376882.1|	-	0.00019	20.4	0.1	0.00048	19.1	0.0	1.7	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Trp_halogenase	PF04820.9	gi|15921213|ref|NP_376882.1|	-	0.00046	18.9	0.0	0.00077	18.2	0.0	1.4	1	0	0	1	1	1	1	Tryptophan	halogenase
NAD_binding_9	PF13454.1	gi|15921213|ref|NP_376882.1|	-	0.00073	19.3	0.0	0.024	14.3	0.0	2.5	2	0	0	2	2	2	1	FAD-NAD(P)-binding
NAD_binding_8	PF13450.1	gi|15921213|ref|NP_376882.1|	-	0.007	16.3	0.1	0.016	15.2	0.1	1.6	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.19	gi|15921213|ref|NP_376882.1|	-	0.011	14.6	0.1	0.017	13.9	0.1	1.3	1	0	0	1	1	1	0	FAD	binding	domain
Lycopene_cycl	PF05834.7	gi|15921213|ref|NP_376882.1|	-	0.042	12.7	0.0	0.43	9.4	0.0	2.4	3	0	0	3	3	3	0	Lycopene	cyclase	protein
Pyr_redox_3	PF13738.1	gi|15921213|ref|NP_376882.1|	-	0.047	13.7	1.3	1.2	9.1	0.2	2.9	2	1	1	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
DUF4364	PF14277.1	gi|15921214|ref|NP_376883.1|	-	0.0047	16.5	0.7	0.0047	16.5	0.5	1.7	2	1	0	2	2	2	1	Domain	of	unknown	function	(DUF4364)
TcdA_TcdB	PF12919.2	gi|15921214|ref|NP_376883.1|	-	0.0074	14.8	1.1	0.0074	14.8	0.8	1.4	2	0	0	2	2	2	1	TcdA/TcdB	catalytic	glycosyltransferase	domain
Robl_LC7	PF03259.12	gi|15921214|ref|NP_376883.1|	-	0.024	14.1	0.0	0.039	13.5	0.0	1.3	1	0	0	1	1	1	0	Roadblock/LC7	domain
HTH_45	PF14947.1	gi|15921214|ref|NP_376883.1|	-	0.05	13.4	0.1	0.05	13.4	0.1	2.6	3	0	0	3	3	3	0	Winged	helix-turn-helix
DUF1062	PF06353.7	gi|15921214|ref|NP_376883.1|	-	0.073	13.2	0.1	0.31	11.2	0.0	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1062)
Glyco_hydro_15	PF00723.16	gi|15921215|ref|NP_376884.1|	-	4.7e-49	167.1	0.0	1.6e-47	162.1	0.1	2.0	1	1	1	2	2	2	2	Glycosyl	hydrolases	family	15
DUF1237	PF06824.6	gi|15921215|ref|NP_376884.1|	-	9.1e-06	24.5	0.9	0.00029	19.5	0.0	2.6	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF1237)
Bac_rhamnosid	PF05592.6	gi|15921215|ref|NP_376884.1|	-	0.016	13.4	1.7	0.027	12.6	1.2	1.3	1	0	0	1	1	1	0	Bacterial	alpha-L-rhamnosidase
TPR_19	PF14559.1	gi|15921215|ref|NP_376884.1|	-	0.025	14.9	0.0	1.1	9.7	0.0	2.6	2	0	0	2	2	2	0	Tetratricopeptide	repeat
Glycos_transf_1	PF00534.15	gi|15921216|ref|NP_376885.1|	-	1.6e-35	122.0	0.2	3.9e-35	120.8	0.0	1.6	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|15921216|ref|NP_376885.1|	-	3.8e-15	56.2	0.0	1.7e-14	54.1	0.0	2.0	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|15921216|ref|NP_376885.1|	-	1.3e-06	28.5	0.0	7.7e-06	26.0	0.0	2.3	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_transf_20	PF00982.16	gi|15921216|ref|NP_376885.1|	-	0.023	13.1	0.7	0.37	9.2	0.1	2.2	2	1	0	2	2	2	0	Glycosyltransferase	family	20
PNP_UDP_1	PF01048.15	gi|15921217|ref|NP_376886.1|	-	5.5e-38	130.2	0.0	6.2e-38	130.0	0.0	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
HD	PF01966.17	gi|15921218|ref|NP_376887.1|	-	2.2e-10	40.5	0.9	4.6e-10	39.5	0.1	2.0	3	0	0	3	3	3	1	HD	domain
HDOD	PF08668.7	gi|15921218|ref|NP_376887.1|	-	0.044	13.0	0.0	0.089	12.0	0.0	1.5	1	0	0	1	1	1	0	HDOD	domain
Nudix_N	PF12535.3	gi|15921218|ref|NP_376887.1|	-	0.054	12.9	0.0	0.7	9.3	0.0	2.5	2	0	0	2	2	2	0	Hydrolase	of	X-linked	nucleoside	diphosphate	N	terminal
DUF2779	PF11074.3	gi|15921218|ref|NP_376887.1|	-	0.73	9.8	7.1	0.29	11.1	0.2	3.2	2	2	1	3	3	3	0	Domain	of	unknown	function(DUF2779)
GHMP_kinases_N	PF00288.21	gi|15921219|ref|NP_376888.1|	-	2.5e-11	43.4	1.6	4.5e-11	42.6	1.1	1.4	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_N	PF00288.21	gi|15921220|ref|NP_376889.1|	-	2.2e-13	50.0	0.0	5.5e-13	48.7	0.0	1.7	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|15921220|ref|NP_376889.1|	-	0.00057	20.0	0.1	0.0013	18.8	0.0	1.6	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
HTH_45	PF14947.1	gi|15921222|ref|NP_376891.1|	-	1.7e-27	95.0	0.8	2.2e-27	94.6	0.5	1.1	1	0	0	1	1	1	1	Winged	helix-turn-helix
Ribosomal_S19e	PF01090.14	gi|15921222|ref|NP_376891.1|	-	0.00064	19.1	0.0	0.00084	18.7	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S19e
HTH_24	PF13412.1	gi|15921222|ref|NP_376891.1|	-	0.0013	18.0	0.4	0.0027	17.0	0.0	1.7	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HemN_C	PF06969.11	gi|15921222|ref|NP_376891.1|	-	0.0077	16.2	0.0	0.016	15.2	0.0	1.5	2	0	0	2	2	2	1	HemN	C-terminal	domain
Mrr_N	PF14338.1	gi|15921222|ref|NP_376891.1|	-	0.013	15.6	0.0	0.024	14.7	0.0	1.7	1	1	0	1	1	1	0	Mrr	N-terminal	domain
DUF3116	PF11313.3	gi|15921222|ref|NP_376891.1|	-	0.013	15.1	0.2	0.033	13.7	0.1	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3116)
Topoisom_bac	PF01131.15	gi|15921222|ref|NP_376891.1|	-	0.016	14.0	0.0	0.021	13.6	0.0	1.2	1	0	0	1	1	1	0	DNA	topoisomerase
Rrf2	PF02082.15	gi|15921222|ref|NP_376891.1|	-	0.027	14.5	0.0	0.037	14.1	0.0	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
DUF4364	PF14277.1	gi|15921222|ref|NP_376891.1|	-	0.051	13.1	0.2	0.078	12.5	0.1	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4364)
HTH_27	PF13463.1	gi|15921222|ref|NP_376891.1|	-	0.056	13.7	0.0	0.095	13.0	0.0	1.4	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
MCM	PF00493.18	gi|15921222|ref|NP_376891.1|	-	0.062	12.0	0.1	4.3	6.0	0.0	2.0	1	1	1	2	2	2	0	MCM2/3/5	family
DUF2250	PF10007.4	gi|15921222|ref|NP_376891.1|	-	0.072	12.9	0.1	0.12	12.3	0.0	1.4	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF2443	PF10398.4	gi|15921222|ref|NP_376891.1|	-	0.085	12.6	2.5	0.27	11.0	1.7	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2443)
Cullin_Nedd8	PF10557.4	gi|15921222|ref|NP_376891.1|	-	0.098	12.4	0.3	0.4	10.5	0.0	2.0	2	0	0	2	2	2	0	Cullin	protein	neddylation	domain
TrmB	PF01978.14	gi|15921223|ref|NP_376892.1|	-	8.6e-12	44.5	0.1	1.3e-11	44.0	0.1	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_11	PF08279.7	gi|15921223|ref|NP_376892.1|	-	7.4e-08	31.9	0.1	1.5e-07	30.9	0.1	1.4	1	0	0	1	1	1	1	HTH	domain
MarR	PF01047.17	gi|15921223|ref|NP_376892.1|	-	1.6e-07	30.8	0.2	2.5e-07	30.3	0.1	1.3	1	0	0	1	1	1	1	MarR	family
TFIIE_alpha	PF02002.12	gi|15921223|ref|NP_376892.1|	-	3.7e-07	29.6	0.8	4.1e-07	29.4	0.6	1.2	1	0	0	1	1	1	1	TFIIE	alpha	subunit
Fe_dep_repress	PF01325.14	gi|15921223|ref|NP_376892.1|	-	3.9e-07	29.9	0.2	1.1e-06	28.5	0.2	1.8	1	1	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_27	PF13463.1	gi|15921223|ref|NP_376892.1|	-	4.2e-07	30.1	0.0	6.5e-07	29.5	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|15921223|ref|NP_376892.1|	-	8.5e-07	28.5	0.0	1.1e-06	28.1	0.0	1.2	1	0	0	1	1	1	1	MarR	family
HTH_5	PF01022.15	gi|15921223|ref|NP_376892.1|	-	2.1e-05	24.1	0.1	3.3e-05	23.4	0.1	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
GntR	PF00392.16	gi|15921223|ref|NP_376892.1|	-	3.8e-05	23.0	0.1	0.00025	20.4	0.0	1.9	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	gntR	family
HTH_Crp_2	PF13545.1	gi|15921223|ref|NP_376892.1|	-	0.00015	21.4	0.0	0.00022	20.9	0.0	1.4	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_24	PF13412.1	gi|15921223|ref|NP_376892.1|	-	0.00019	20.7	0.0	0.00031	20.0	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
DUF387	PF04079.11	gi|15921223|ref|NP_376892.1|	-	0.00021	20.6	0.0	0.00025	20.4	0.0	1.2	1	0	0	1	1	1	1	Putative	transcriptional	regulators	(Ypuh-like)
Rrf2	PF02082.15	gi|15921223|ref|NP_376892.1|	-	0.00098	19.1	0.0	0.0016	18.5	0.0	1.3	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_DeoR	PF08220.7	gi|15921223|ref|NP_376892.1|	-	0.0019	17.7	0.1	0.0038	16.7	0.0	1.5	2	0	0	2	2	1	1	DeoR-like	helix-turn-helix	domain
HTH_20	PF12840.2	gi|15921223|ref|NP_376892.1|	-	0.0025	17.5	0.0	0.0036	17.0	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
DUF4423	PF14394.1	gi|15921223|ref|NP_376892.1|	-	0.004	16.7	0.6	0.01	15.4	0.1	1.7	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4423)
FeoC	PF09012.5	gi|15921223|ref|NP_376892.1|	-	0.006	16.2	0.1	0.0099	15.5	0.0	1.3	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
PadR	PF03551.9	gi|15921223|ref|NP_376892.1|	-	0.011	15.4	0.0	0.017	14.8	0.0	1.3	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
Phage_rep_O	PF04492.8	gi|15921223|ref|NP_376892.1|	-	0.014	15.6	0.0	0.02	15.0	0.0	1.3	1	0	0	1	1	1	0	Bacteriophage	replication	protein	O
EAP30	PF04157.11	gi|15921223|ref|NP_376892.1|	-	0.023	13.8	0.0	0.032	13.4	0.0	1.2	1	0	0	1	1	1	0	EAP30/Vps36	family
HTH_36	PF13730.1	gi|15921223|ref|NP_376892.1|	-	0.028	14.5	0.0	0.052	13.6	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
Mnd1	PF03962.10	gi|15921223|ref|NP_376892.1|	-	0.034	13.8	0.4	0.034	13.8	0.2	1.4	2	0	0	2	2	1	0	Mnd1	family
DDRGK	PF09756.4	gi|15921223|ref|NP_376892.1|	-	0.035	13.5	0.1	0.058	12.8	0.0	1.3	1	0	0	1	1	1	0	DDRGK	domain
B-block_TFIIIC	PF04182.7	gi|15921223|ref|NP_376892.1|	-	0.036	13.8	0.2	0.079	12.8	0.1	1.6	2	0	0	2	2	1	0	B-block	binding	subunit	of	TFIIIC
RP-C	PF03428.8	gi|15921223|ref|NP_376892.1|	-	0.047	13.1	0.0	0.13	11.6	0.0	1.7	1	1	1	2	2	2	0	Replication	protein	C	N-terminal	domain
DUF2513	PF10711.4	gi|15921223|ref|NP_376892.1|	-	0.052	13.6	0.1	0.071	13.1	0.0	1.4	1	1	0	1	1	1	0	Hypothetical	protein	(DUF2513)
HTH_10	PF04967.7	gi|15921223|ref|NP_376892.1|	-	0.069	12.7	0.0	0.13	11.8	0.0	1.4	1	0	0	1	1	1	0	HTH	DNA	binding	domain
RuvB_C	PF05491.8	gi|15921223|ref|NP_376892.1|	-	0.11	12.1	0.1	0.17	11.5	0.0	1.3	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	ruvB	C-terminus
PCI	PF01399.22	gi|15921223|ref|NP_376892.1|	-	0.11	12.8	0.4	0.33	11.2	0.1	1.8	1	1	1	2	2	2	0	PCI	domain
HrcA_DNA-bdg	PF03444.10	gi|15921223|ref|NP_376892.1|	-	0.13	11.6	0.1	0.23	10.9	0.1	1.4	1	0	0	1	1	1	0	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
DUF2250	PF10007.4	gi|15921223|ref|NP_376892.1|	-	0.14	12.1	0.3	0.2	11.5	0.1	1.4	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Penicillinase_R	PF03965.11	gi|15921223|ref|NP_376892.1|	-	0.14	12.2	0.3	0.22	11.5	0.2	1.5	1	1	0	1	1	1	0	Penicillinase	repressor
DUF123	PF01986.11	gi|15921224|ref|NP_376893.1|	-	4.8e-23	81.1	0.0	5.9e-23	80.8	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF123
GIY-YIG	PF01541.19	gi|15921224|ref|NP_376893.1|	-	0.018	15.3	0.1	0.023	15.0	0.1	1.3	1	0	0	1	1	1	0	GIY-YIG	catalytic	domain
TPR_11	PF13414.1	gi|15921226|ref|NP_376895.1|	-	2.7e-36	123.0	14.5	4.9e-16	58.1	0.1	4.6	3	1	1	4	4	4	4	TPR	repeat
TPR_2	PF07719.12	gi|15921226|ref|NP_376895.1|	-	4.4e-26	88.6	17.7	1e-06	28.2	0.1	8.5	6	2	2	8	8	8	5	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|15921226|ref|NP_376895.1|	-	7.5e-24	83.8	2.1	1.1e-06	29.0	0.0	5.1	3	2	2	5	5	5	3	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|15921226|ref|NP_376895.1|	-	6.1e-23	79.4	25.9	2.2e-08	33.3	0.1	8.0	8	1	0	8	8	7	5	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|15921226|ref|NP_376895.1|	-	3e-20	70.6	11.5	0.00011	22.1	0.0	6.4	6	1	1	7	7	6	4	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|15921226|ref|NP_376895.1|	-	5.7e-19	66.4	25.5	1.6e-05	24.3	0.2	6.9	6	1	1	7	7	7	5	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|15921226|ref|NP_376895.1|	-	1.7e-15	56.0	0.1	0.00033	21.0	0.0	6.3	3	2	4	7	7	7	3	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|15921226|ref|NP_376895.1|	-	2.4e-15	56.5	11.0	6.1e-06	26.4	0.0	5.1	3	1	2	5	5	5	4	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|15921226|ref|NP_376895.1|	-	1.1e-13	50.8	7.2	4.7e-06	26.4	0.0	5.5	2	2	3	6	6	6	4	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|15921226|ref|NP_376895.1|	-	1.9e-11	43.9	8.9	0.0019	18.2	1.1	3.5	2	2	1	3	3	3	3	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_6	PF13174.1	gi|15921226|ref|NP_376895.1|	-	8.5e-09	35.3	11.0	3.3	8.3	0.0	7.5	7	1	1	8	8	8	1	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|15921226|ref|NP_376895.1|	-	5.1e-08	32.1	5.8	0.15	11.9	0.0	6.1	7	1	0	7	7	7	2	Tetratricopeptide	repeat
TPR_9	PF13371.1	gi|15921226|ref|NP_376895.1|	-	3.3e-07	30.0	0.0	0.026	14.3	0.0	4.2	3	1	1	4	4	4	2	Tetratricopeptide	repeat
NARP1	PF12569.3	gi|15921226|ref|NP_376895.1|	-	5.1e-06	25.5	3.1	0.00055	18.8	0.2	2.8	2	1	0	2	2	2	2	NMDA	receptor-regulated	protein	1
TPR_20	PF14561.1	gi|15921226|ref|NP_376895.1|	-	1.3e-05	25.2	0.6	12	6.1	0.0	5.0	2	2	4	6	6	6	0	Tetratricopeptide	repeat
TPR_21	PF09976.4	gi|15921226|ref|NP_376895.1|	-	1.3e-05	25.1	1.8	0.93	9.4	0.2	4.0	2	2	0	3	3	3	2	Tetratricopeptide	repeat
FAT	PF02259.18	gi|15921226|ref|NP_376895.1|	-	0.00052	19.1	0.2	0.0027	16.7	0.1	1.9	1	1	0	1	1	1	1	FAT	domain
Coatomer_E	PF04733.9	gi|15921226|ref|NP_376895.1|	-	0.00064	19.0	2.7	0.0082	15.3	0.1	2.4	2	1	1	3	3	3	1	Coatomer	epsilon	subunit
MIT	PF04212.13	gi|15921226|ref|NP_376895.1|	-	0.0012	18.6	0.1	0.0012	18.6	0.1	4.2	4	1	1	5	5	4	1	MIT	(microtubule	interacting	and	transport)	domain
Alkyl_sulf_dimr	PF14863.1	gi|15921226|ref|NP_376895.1|	-	0.0018	18.5	1.0	1.5	9.0	0.1	2.8	2	1	1	3	3	3	1	Alkyl	sulfatase	dimerisation
DUF3366	PF11846.3	gi|15921226|ref|NP_376895.1|	-	0.01	15.7	0.1	3.5	7.4	0.0	2.4	2	1	0	2	2	2	1	Domain	of	unknown	function	(DUF3366)
DUF4363	PF14276.1	gi|15921226|ref|NP_376895.1|	-	0.012	15.2	2.9	0.073	12.7	0.1	3.1	2	2	1	3	3	3	0	Domain	of	unknown	function	(DUF4363)
YfdX	PF10938.3	gi|15921226|ref|NP_376895.1|	-	0.024	14.2	4.3	2.9	7.5	0.2	3.4	2	2	1	3	3	3	0	YfdX	protein
DUF357	PF04010.8	gi|15921226|ref|NP_376895.1|	-	0.053	13.2	7.5	2	8.1	0.1	4.1	3	1	2	5	5	5	0	Protein	of	unknown	function	(DUF357)
BTAD	PF03704.12	gi|15921226|ref|NP_376895.1|	-	0.062	13.5	0.0	30	4.8	0.0	3.1	3	0	0	3	3	3	0	Bacterial	transcriptional	activator	domain
RPN7	PF10602.4	gi|15921226|ref|NP_376895.1|	-	0.087	12.2	6.0	9.3	5.5	0.2	3.6	2	2	1	3	3	3	0	26S	proteasome	subunit	RPN7
TPR_10	PF13374.1	gi|15921226|ref|NP_376895.1|	-	0.41	10.6	4.2	39	4.3	0.0	4.4	6	0	0	6	6	4	0	Tetratricopeptide	repeat
EST1_DNA_bind	PF10373.4	gi|15921226|ref|NP_376895.1|	-	0.51	9.5	3.0	0.61	9.2	0.0	2.5	3	1	0	3	3	3	0	Est1	DNA/RNA	binding	domain
Clathrin	PF00637.15	gi|15921226|ref|NP_376895.1|	-	0.77	9.3	6.4	2	8.0	1.4	2.7	2	1	0	2	2	2	0	Region	in	Clathrin	and	VPS
CbiA	PF01656.18	gi|15921228|ref|NP_376897.1|	-	1.5e-12	47.3	0.0	5.7e-12	45.4	0.0	1.9	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.1	gi|15921228|ref|NP_376897.1|	-	4.7e-08	33.1	0.0	1.7e-07	31.3	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
ArsA_ATPase	PF02374.10	gi|15921228|ref|NP_376897.1|	-	7.2e-05	21.9	0.4	0.00082	18.5	0.0	2.4	1	1	0	2	2	2	1	Anion-transporting	ATPase
MipZ	PF09140.6	gi|15921228|ref|NP_376897.1|	-	0.00023	20.3	0.0	0.0049	15.9	0.0	2.1	2	0	0	2	2	2	1	ATPase	MipZ
AAA	PF00004.24	gi|15921228|ref|NP_376897.1|	-	0.00081	19.5	0.2	0.0019	18.3	0.0	1.7	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
SRP54	PF00448.17	gi|15921228|ref|NP_376897.1|	-	0.0033	16.8	0.1	0.29	10.5	0.0	2.2	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
YhjQ	PF06564.7	gi|15921228|ref|NP_376897.1|	-	0.0037	16.6	0.0	0.01	15.2	0.0	1.6	1	1	0	1	1	1	1	YhjQ	protein
AAA_17	PF13207.1	gi|15921228|ref|NP_376897.1|	-	0.0049	17.6	0.1	0.025	15.3	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
APS_kinase	PF01583.15	gi|15921228|ref|NP_376897.1|	-	0.015	14.9	0.0	0.039	13.5	0.0	1.7	2	0	0	2	2	2	0	Adenylylsulphate	kinase
IstB_IS21	PF01695.12	gi|15921228|ref|NP_376897.1|	-	0.02	14.2	0.0	3.9	6.8	0.0	2.1	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
MobB	PF03205.9	gi|15921228|ref|NP_376897.1|	-	0.022	14.4	0.0	0.047	13.3	0.0	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NTP_transf_2	PF01909.18	gi|15921230|ref|NP_376899.1|	-	4.2e-09	36.6	0.8	6.8e-09	35.9	0.6	1.5	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
AAA_14	PF13173.1	gi|15921231|ref|NP_376900.1|	-	2.2e-31	108.3	0.1	6.1e-31	106.9	0.1	1.7	1	0	0	1	1	1	1	AAA	domain
DUF4143	PF13635.1	gi|15921231|ref|NP_376900.1|	-	2.9e-13	49.8	1.0	2.6e-12	46.7	0.1	2.7	2	1	0	3	3	3	1	Domain	of	unknown	function	(DUF4143)
Arch_ATPase	PF01637.13	gi|15921231|ref|NP_376900.1|	-	6.6e-09	35.8	5.7	0.00063	19.5	0.1	3.1	2	1	1	3	3	3	2	Archaeal	ATPase
AAA	PF00004.24	gi|15921231|ref|NP_376900.1|	-	0.015	15.4	0.0	0.041	14.0	0.0	1.7	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_17	PF13207.1	gi|15921231|ref|NP_376900.1|	-	0.031	15.1	0.1	0.12	13.2	0.0	2.0	1	0	0	1	1	1	0	AAA	domain
L51_S25_CI-B8	PF05047.11	gi|15921231|ref|NP_376900.1|	-	0.077	12.7	0.0	0.26	11.0	0.0	1.9	1	0	0	1	1	1	0	Mitochondrial	ribosomal	protein	L51	/	S25	/	CI-B8	domain
AAA_22	PF13401.1	gi|15921231|ref|NP_376900.1|	-	0.12	12.5	0.0	5.4	7.1	0.0	2.5	1	1	0	1	1	1	0	AAA	domain
MobB	PF03205.9	gi|15921231|ref|NP_376900.1|	-	0.13	12.0	0.0	0.34	10.6	0.0	1.7	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_16	PF13191.1	gi|15921231|ref|NP_376900.1|	-	0.17	11.8	0.0	0.41	10.5	0.0	1.7	1	1	0	1	1	1	0	AAA	ATPase	domain
DUF650	PF04894.7	gi|15921232|ref|NP_376901.1|	-	3.8e-102	341.4	0.0	5.2e-102	340.9	0.0	1.2	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF650)
DUF651	PF04895.7	gi|15921232|ref|NP_376901.1|	-	6.4e-39	131.9	0.0	1.1e-38	131.2	0.0	1.3	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF651)
Radical_SAM	PF04055.16	gi|15921233|ref|NP_376902.1|	-	5.7e-11	42.8	0.0	8.1e-11	42.3	0.0	1.2	1	0	0	1	1	1	1	Radical	SAM	superfamily
DUF1848	PF08902.6	gi|15921233|ref|NP_376902.1|	-	0.022	14.3	7.9	0.063	12.8	0.0	2.5	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF1848)
DUF4328	PF14219.1	gi|15921234|ref|NP_376903.1|	-	0.57	9.4	5.4	1.4	8.1	0.2	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4328)
Acetyltransf_9	PF13527.1	gi|15921236|ref|NP_376905.1|	-	4.5e-15	55.6	0.0	5.7e-15	55.3	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.1	gi|15921236|ref|NP_376905.1|	-	7.9e-14	51.5	0.0	1.1e-13	51.1	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.19	gi|15921236|ref|NP_376905.1|	-	2.9e-09	36.8	0.0	4.2e-09	36.3	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.1	gi|15921236|ref|NP_376905.1|	-	7.2e-07	29.3	0.0	1e-06	28.8	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|15921236|ref|NP_376905.1|	-	0.00019	21.1	0.0	0.00046	19.8	0.0	1.7	1	1	0	1	1	1	1	FR47-like	protein
Acetyltransf_CG	PF14542.1	gi|15921236|ref|NP_376905.1|	-	0.068	13.0	0.0	0.15	11.9	0.0	1.7	1	1	0	1	1	1	0	GCN5-related	N-acetyl-transferase
Linocin_M18	PF04454.7	gi|15921237|ref|NP_376906.1|	-	1.2e-35	122.7	0.2	1.6e-35	122.2	0.1	1.2	1	0	0	1	1	1	1	Encapsulating	protein	for	peroxidase
Rubrerythrin	PF02915.12	gi|15921237|ref|NP_376906.1|	-	0.0041	17.4	2.4	0.0093	16.2	1.6	1.7	1	1	0	1	1	1	1	Rubrerythrin
Ferritin	PF00210.19	gi|15921237|ref|NP_376906.1|	-	0.042	13.5	0.2	0.071	12.8	0.1	1.5	1	0	0	1	1	1	0	Ferritin-like	domain
DUF4143	PF13635.1	gi|15921238|ref|NP_376907.1|	-	2.6e-08	33.9	0.1	3.2e-08	33.6	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
Glyco_tranf_2_2	PF10111.4	gi|15921238|ref|NP_376907.1|	-	0.11	11.5	0.3	0.11	11.5	0.2	1.1	1	0	0	1	1	1	0	Glycosyltransferase	like	family	2
DUF234	PF03008.9	gi|15921238|ref|NP_376907.1|	-	0.13	12.3	0.9	0.27	11.3	0.1	1.8	1	1	1	2	2	2	0	Archaea	bacterial	proteins	of	unknown	function
AAA_14	PF13173.1	gi|15921239|ref|NP_376908.1|	-	7.4e-18	64.6	0.0	8.4e-18	64.4	0.0	1.0	1	0	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|15921239|ref|NP_376908.1|	-	0.1	12.2	0.0	0.11	12.2	0.0	1.1	1	0	0	1	1	1	0	Archaeal	ATPase
AAA_14	PF13173.1	gi|15921240|ref|NP_376909.1|	-	0.0027	17.5	0.0	0.0027	17.5	0.0	1.0	1	0	0	1	1	1	1	AAA	domain
DUF95	PF01944.12	gi|15921241|ref|NP_376910.1|	-	8.6e-07	28.7	24.2	7.1e-06	25.7	16.8	1.9	1	1	0	1	1	1	1	Integral	membrane	protein	DUF95
Peptidase_M48	PF01435.13	gi|15921242|ref|NP_376911.1|	-	0.0001	21.9	0.0	0.00025	20.7	0.0	1.7	1	0	0	1	1	1	1	Peptidase	family	M48
DUF3185	PF11381.3	gi|15921243|ref|NP_376912.1|	-	0.61	9.8	8.4	0.97	9.2	2.1	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3185)
OrfB_Zn_ribbon	PF07282.6	gi|15921244|ref|NP_376913.1|	-	7e-21	73.6	1.5	2.6e-20	71.8	0.3	2.3	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|15921244|ref|NP_376913.1|	-	5.5e-09	35.7	0.5	9.7e-09	34.9	0.4	1.4	1	0	0	1	1	1	1	Probable	transposase
zf-C4_Topoisom	PF01396.14	gi|15921244|ref|NP_376913.1|	-	0.044	13.2	0.1	0.083	12.4	0.1	1.4	1	0	0	1	1	1	0	Topoisomerase	DNA	binding	C4	zinc	finger
Cupin_2	PF07883.6	gi|15921245|ref|NP_376914.1|	-	1.2e-16	59.9	0.0	1.6e-16	59.5	0.0	1.2	1	0	0	1	1	1	1	Cupin	domain
MannoseP_isomer	PF01050.13	gi|15921245|ref|NP_376914.1|	-	7.4e-09	35.3	0.1	8.5e-09	35.1	0.0	1.1	1	0	0	1	1	1	1	Mannose-6-phosphate	isomerase
Cupin_1	PF00190.17	gi|15921245|ref|NP_376914.1|	-	1.9e-08	33.8	0.0	2.5e-08	33.4	0.0	1.2	1	0	0	1	1	1	1	Cupin
AraC_binding	PF02311.14	gi|15921245|ref|NP_376914.1|	-	3e-05	23.7	0.0	4e-05	23.3	0.0	1.1	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
Cupin_3	PF05899.7	gi|15921245|ref|NP_376914.1|	-	3.6e-05	23.0	0.1	6.9e-05	22.1	0.1	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF861)
Ectoine_synth	PF06339.7	gi|15921245|ref|NP_376914.1|	-	0.00013	21.8	0.1	0.00017	21.5	0.0	1.1	1	0	0	1	1	1	1	Ectoine	synthase
DUF4437	PF14499.1	gi|15921245|ref|NP_376914.1|	-	0.00072	18.5	0.0	0.00088	18.2	0.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4437)
Cupin_7	PF12973.2	gi|15921245|ref|NP_376914.1|	-	0.0011	18.7	0.0	0.0014	18.3	0.0	1.2	1	0	0	1	1	1	1	ChrR	Cupin-like	domain
Asp_Arg_Hydrox	PF05118.10	gi|15921245|ref|NP_376914.1|	-	0.0047	16.7	0.0	0.0057	16.4	0.0	1.3	1	0	0	1	1	1	1	Aspartyl/Asparaginyl	beta-hydroxylase
Cupin_6	PF12852.2	gi|15921245|ref|NP_376914.1|	-	0.0069	16.0	0.0	0.0076	15.8	0.0	1.1	1	0	0	1	1	1	1	Cupin
EutQ	PF06249.7	gi|15921245|ref|NP_376914.1|	-	0.016	14.7	0.0	0.02	14.4	0.0	1.1	1	0	0	1	1	1	0	Ethanolamine	utilisation	protein	EutQ
KduI	PF04962.7	gi|15921245|ref|NP_376914.1|	-	0.059	12.4	0.0	0.071	12.1	0.0	1.1	1	0	0	1	1	1	0	KduI/IolB	family
Auxin_BP	PF02041.11	gi|15921245|ref|NP_376914.1|	-	0.11	11.8	0.0	0.12	11.7	0.0	1.2	1	0	0	1	1	1	0	Auxin	binding	protein
DUF1637	PF07847.7	gi|15921245|ref|NP_376914.1|	-	0.12	11.7	0.0	0.18	11.1	0.0	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1637)
Glyco_hydro_35	PF01301.14	gi|15921248|ref|NP_376917.1|	-	0.013	14.8	0.1	0.021	14.1	0.0	1.4	2	0	0	2	2	2	0	Glycosyl	hydrolases	family	35
PRP21_like_P	PF12230.3	gi|15921248|ref|NP_376917.1|	-	0.029	13.8	0.2	0.053	13.0	0.1	1.4	1	1	0	1	1	1	0	Pre-mRNA	splicing	factor	PRP21	like	protein
zf-C2H2_2	PF12756.2	gi|15921248|ref|NP_376917.1|	-	0.095	12.8	0.1	0.15	12.1	0.1	1.4	1	0	0	1	1	1	0	C2H2	type	zinc-finger	(2	copies)
Rad50_zn_hook	PF04423.9	gi|15921248|ref|NP_376917.1|	-	0.11	11.9	5.8	0.13	11.7	0.0	3.0	3	0	0	3	3	3	0	Rad50	zinc	hook	motif
Aldose_epim	PF01263.15	gi|15921249|ref|NP_376918.1|	-	2.1e-40	138.6	0.0	4.3e-40	137.6	0.0	1.4	1	1	0	1	1	1	1	Aldose	1-epimerase
Urease_beta	PF00699.15	gi|15921249|ref|NP_376918.1|	-	0.066	13.0	0.0	0.1	12.4	0.0	1.3	1	0	0	1	1	1	0	Urease	beta	subunit
OppC_N	PF12911.2	gi|15921250|ref|NP_376919.1|	-	0.19	11.0	2.5	0.23	10.8	0.3	2.3	2	0	0	2	2	2	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
Internalin_N	PF12354.3	gi|15921250|ref|NP_376919.1|	-	0.58	9.8	3.1	2.1	8.0	2.2	1.9	1	0	0	1	1	1	0	Bacterial	adhesion/invasion	protein	N	terminal
MFS_1	PF07690.11	gi|15921252|ref|NP_376921.1|	-	3.6e-53	180.5	57.8	1.1e-39	136.1	22.7	2.6	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|15921252|ref|NP_376921.1|	-	9.1e-12	44.2	13.1	9.1e-12	44.2	9.1	3.6	2	2	0	3	3	3	2	Sugar	(and	other)	transporter
OATP	PF03137.15	gi|15921252|ref|NP_376921.1|	-	0.0018	16.4	19.9	0.002	16.2	1.0	3.7	3	1	1	4	4	4	2	Organic	Anion	Transporter	Polypeptide	(OATP)	family
TENA_THI-4	PF03070.11	gi|15921253|ref|NP_376922.1|	-	9.4e-42	143.1	0.2	1e-41	142.9	0.1	1.0	1	0	0	1	1	1	1	TENA/THI-4/PQQC	family
Glyco_hydro_38C	PF07748.8	gi|15921254|ref|NP_376923.1|	-	1.8e-75	254.4	3.7	4.5e-75	253.2	2.5	1.6	1	1	0	1	1	1	1	Glycosyl	hydrolases	family	38	C-terminal	domain
Glyco_hydro_38	PF01074.17	gi|15921254|ref|NP_376923.1|	-	3.4e-72	242.9	0.0	6.8e-72	242.0	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	hydrolases	family	38	N-terminal	domain
Alpha-mann_mid	PF09261.6	gi|15921254|ref|NP_376923.1|	-	2.1e-21	75.9	0.0	6.3e-21	74.3	0.0	1.9	1	0	0	1	1	1	1	Alpha	mannosidase,	middle	domain
PEGA	PF08308.6	gi|15921254|ref|NP_376923.1|	-	0.097	12.4	0.2	0.77	9.5	0.0	2.6	3	0	0	3	3	3	0	PEGA	domain
PRA1	PF03208.14	gi|15921255|ref|NP_376924.1|	-	0.84	8.9	4.6	0.74	9.1	1.9	1.8	1	1	1	2	2	2	0	PRA1	family	protein
AmoC	PF04896.7	gi|15921255|ref|NP_376924.1|	-	0.9	8.5	4.7	0.99	8.3	0.7	2.3	1	1	0	3	3	3	0	Ammonia	monooxygenase/methane	monooxygenase,	subunit	C
Oxidored_molyb	PF00174.14	gi|15921256|ref|NP_376925.1|	-	1.7e-42	144.6	0.0	2.1e-42	144.4	0.0	1.1	1	0	0	1	1	1	1	Oxidoreductase	molybdopterin	binding	domain
Amidohydro_4	PF13147.1	gi|15921257|ref|NP_376926.1|	-	5.1e-11	43.1	0.0	7.8e-11	42.5	0.0	1.3	1	1	0	1	1	1	1	Amidohydrolase
Amidohydro_1	PF01979.15	gi|15921257|ref|NP_376926.1|	-	9.4e-09	35.3	0.4	3.8e-08	33.3	0.3	2.0	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|15921257|ref|NP_376926.1|	-	1.3e-08	34.5	0.1	3.7e-08	33.0	0.1	1.7	1	0	0	1	1	1	1	Amidohydrolase
Trp_dioxygenase	PF03301.8	gi|15921257|ref|NP_376926.1|	-	0.00048	19.3	0.1	0.00076	18.6	0.1	1.2	1	0	0	1	1	1	1	Tryptophan	2,3-dioxygenase
Amidohydro_2	PF04909.9	gi|15921257|ref|NP_376926.1|	-	0.063	12.8	0.0	0.17	11.3	0.0	1.8	2	1	0	2	2	2	0	Amidohydrolase
AP_endonuc_2	PF01261.19	gi|15921257|ref|NP_376926.1|	-	0.088	12.0	0.0	0.15	11.3	0.0	1.4	1	1	0	1	1	1	0	Xylose	isomerase-like	TIM	barrel
AA_permease_2	PF13520.1	gi|15921258|ref|NP_376927.1|	-	8.7e-33	113.4	67.0	1.4e-32	112.8	46.4	1.3	1	1	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|15921258|ref|NP_376927.1|	-	3.8e-10	38.7	56.2	3.8e-10	38.7	38.9	1.5	1	1	0	1	1	1	1	Amino	acid	permease
Ald_Xan_dh_C2	PF02738.13	gi|15921259|ref|NP_376928.1|	-	1.5e-74	251.3	0.1	3.4e-72	243.5	0.1	2.6	1	1	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|15921259|ref|NP_376928.1|	-	8.5e-08	32.2	0.0	1.9e-06	27.8	0.0	2.4	1	1	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
WhiA_N	PF10298.4	gi|15921259|ref|NP_376928.1|	-	0.05	13.4	0.1	0.27	11.1	0.0	2.1	2	0	0	2	2	2	0	WhiA	N-terminal	LAGLIDADG-like	domain
Amidohydro_3	PF07969.6	gi|15921260|ref|NP_376929.1|	-	4.4e-07	29.4	0.0	0.0065	15.7	0.0	3.3	2	1	0	2	2	2	2	Amidohydrolase	family
Amidohydro_1	PF01979.15	gi|15921260|ref|NP_376929.1|	-	0.019	14.6	0.0	1.1	8.8	0.0	2.1	2	0	0	2	2	2	0	Amidohydrolase	family
Metallophos_2	PF12850.2	gi|15921261|ref|NP_376930.1|	-	1.5e-11	44.3	0.0	3.5e-11	43.1	0.0	1.5	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos_3	PF14582.1	gi|15921261|ref|NP_376930.1|	-	2.6e-10	39.9	0.3	3.1e-07	29.8	0.0	2.5	3	0	0	3	3	3	2	Metallophosphoesterase,	calcineurin	superfamily
Metallophos	PF00149.23	gi|15921261|ref|NP_376930.1|	-	3.2e-07	29.9	1.8	2.5e-06	27.0	1.3	2.2	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
DUF2226	PF09987.4	gi|15921261|ref|NP_376930.1|	-	0.0073	15.4	0.0	0.016	14.3	0.0	1.5	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2226)
AA_permease_2	PF13520.1	gi|15921263|ref|NP_376932.1|	-	2.1e-16	59.4	62.3	2.9e-16	59.0	43.2	1.1	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|15921263|ref|NP_376932.1|	-	0.0066	14.8	57.1	0.0098	14.2	39.6	1.3	1	0	0	1	1	1	1	Amino	acid	permease
DUF4112	PF13430.1	gi|15921263|ref|NP_376932.1|	-	0.012	15.5	2.6	0.016	15.0	0.5	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4112)
CN_hydrolase	PF00795.17	gi|15921264|ref|NP_376933.1|	-	5.1e-29	100.9	0.0	6.7e-29	100.5	0.0	1.1	1	0	0	1	1	1	1	Carbon-nitrogen	hydrolase
FAD_binding_4	PF01565.18	gi|15921265|ref|NP_376934.1|	-	4.1e-19	68.4	0.2	4.1e-18	65.1	0.1	2.4	1	1	0	1	1	1	1	FAD	binding	domain
Amidohydro_1	PF01979.15	gi|15921266|ref|NP_376935.1|	-	3.5e-13	49.9	0.0	2.9e-12	46.8	0.0	2.1	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|15921266|ref|NP_376935.1|	-	4.6e-11	42.3	0.1	1.3e-09	37.6	0.0	2.5	2	0	0	2	2	2	1	Amidohydrolase
Amidohydro_4	PF13147.1	gi|15921266|ref|NP_376935.1|	-	5e-10	39.8	0.0	0.00022	21.3	0.0	2.2	2	0	0	2	2	2	2	Amidohydrolase
Amidohydro_3	PF07969.6	gi|15921266|ref|NP_376935.1|	-	7.9e-08	31.9	0.0	0.00034	19.9	0.0	2.2	2	0	0	2	2	2	2	Amidohydrolase	family
Complex1_51K	PF01512.12	gi|15921266|ref|NP_376935.1|	-	0.042	13.5	0.0	0.087	12.5	0.0	1.5	1	0	0	1	1	1	0	Respiratory-chain	NADH	dehydrogenase	51	Kd	subunit
Urease_alpha	PF00449.15	gi|15921266|ref|NP_376935.1|	-	0.15	12.1	0.3	0.15	12.1	0.2	1.9	2	0	0	2	2	2	0	Urease	alpha-subunit,	N-terminal	domain
Rieske	PF00355.21	gi|15921267|ref|NP_376936.1|	-	1.4e-17	62.9	0.0	2.5e-17	62.2	0.0	1.4	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Rieske_2	PF13806.1	gi|15921267|ref|NP_376936.1|	-	9.2e-05	22.1	0.0	0.00016	21.3	0.0	1.4	1	0	0	1	1	1	1	Rieske-like	[2Fe-2S]	domain
DUF3146	PF11344.3	gi|15921267|ref|NP_376936.1|	-	0.023	14.1	0.0	0.054	12.9	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3146)
SHS2_FTSA	PF02491.15	gi|15921267|ref|NP_376936.1|	-	0.09	12.6	0.1	0.18	11.7	0.1	1.4	1	0	0	1	1	1	0	SHS2	domain	inserted	in	FTSA
Ring_hydroxyl_A	PF00848.14	gi|15921267|ref|NP_376936.1|	-	0.16	11.6	1.8	0.92	9.1	1.3	2.0	1	1	0	1	1	1	0	Ring	hydroxylating	alpha	subunit	(catalytic	domain)
DUF2187	PF09953.4	gi|15921268|ref|NP_376937.1|	-	0.18	11.5	1.9	0.13	12.0	0.4	1.6	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2187)
HTH_24	PF13412.1	gi|15921269|ref|NP_376938.1|	-	2.2e-15	55.7	1.6	3.2e-15	55.2	1.1	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|15921269|ref|NP_376938.1|	-	7e-11	41.4	0.1	1e-10	40.9	0.1	1.3	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
AsnC_trans_reg	PF01037.16	gi|15921269|ref|NP_376938.1|	-	4.4e-10	39.1	0.0	7.2e-10	38.4	0.0	1.3	1	0	0	1	1	1	1	AsnC	family
HTH_20	PF12840.2	gi|15921269|ref|NP_376938.1|	-	4.9e-09	35.8	0.0	8.9e-09	35.0	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR_2	PF12802.2	gi|15921269|ref|NP_376938.1|	-	4e-07	29.5	0.0	6.3e-07	28.9	0.0	1.3	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.17	gi|15921269|ref|NP_376938.1|	-	3.2e-06	26.7	0.0	7.8e-06	25.4	0.0	1.5	2	0	0	2	2	1	1	MarR	family
HTH_5	PF01022.15	gi|15921269|ref|NP_376938.1|	-	2.2e-05	24.0	0.0	3.3e-05	23.4	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_23	PF13384.1	gi|15921269|ref|NP_376938.1|	-	0.00089	18.8	0.0	0.0015	18.1	0.0	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_34	PF13601.1	gi|15921269|ref|NP_376938.1|	-	0.0014	18.5	0.0	0.0024	17.8	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|15921269|ref|NP_376938.1|	-	0.0027	17.3	0.3	0.0052	16.4	0.2	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_28	PF13518.1	gi|15921269|ref|NP_376938.1|	-	0.0041	17.0	0.1	0.0066	16.4	0.1	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_38	PF13936.1	gi|15921269|ref|NP_376938.1|	-	0.0058	16.1	0.1	0.01	15.3	0.1	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|15921269|ref|NP_376938.1|	-	0.0061	16.6	0.2	0.028	14.5	0.0	2.1	2	1	0	2	2	2	1	Transcriptional	regulator
HTH_11	PF08279.7	gi|15921269|ref|NP_376938.1|	-	0.0079	15.8	0.1	0.018	14.7	0.1	1.6	1	0	0	1	1	1	1	HTH	domain
Fe_dep_repress	PF01325.14	gi|15921269|ref|NP_376938.1|	-	0.0083	16.0	0.1	0.025	14.4	0.0	1.8	2	0	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_30	PF13556.1	gi|15921269|ref|NP_376938.1|	-	0.0093	15.5	0.0	0.015	14.8	0.0	1.3	1	0	0	1	1	1	1	PucR	C-terminal	helix-turn-helix	domain
UPF0122	PF04297.9	gi|15921269|ref|NP_376938.1|	-	0.01	15.8	0.4	0.062	13.3	0.1	2.0	2	0	0	2	2	2	1	Putative	helix-turn-helix	protein,	YlxM	/	p13	like
HTH_10	PF04967.7	gi|15921269|ref|NP_376938.1|	-	0.014	14.9	0.4	0.031	13.8	0.1	1.7	2	0	0	2	2	2	0	HTH	DNA	binding	domain
DUF2250	PF10007.4	gi|15921269|ref|NP_376938.1|	-	0.014	15.2	0.3	0.048	13.5	0.1	1.9	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HxlR	PF01638.12	gi|15921269|ref|NP_376938.1|	-	0.022	14.3	0.0	0.04	13.5	0.0	1.5	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
CENP-B_N	PF04218.8	gi|15921269|ref|NP_376938.1|	-	0.029	13.7	0.0	0.056	12.8	0.0	1.5	1	0	0	1	1	1	0	CENP-B	N-terminal	DNA-binding	domain
HTH_IclR	PF09339.5	gi|15921269|ref|NP_376938.1|	-	0.035	13.7	0.0	0.056	13.0	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_27	PF13463.1	gi|15921269|ref|NP_376938.1|	-	0.042	14.1	0.0	0.08	13.2	0.0	1.4	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
Mga	PF05043.8	gi|15921269|ref|NP_376938.1|	-	0.048	13.9	0.0	0.12	12.7	0.0	1.7	1	0	0	1	1	1	0	Mga	helix-turn-helix	domain
EAP30	PF04157.11	gi|15921269|ref|NP_376938.1|	-	0.073	12.2	0.0	2.5	7.2	0.0	2.1	2	0	0	2	2	2	0	EAP30/Vps36	family
RHH_3	PF12651.2	gi|15921269|ref|NP_376938.1|	-	0.089	12.5	0.1	0.21	11.3	0.1	1.6	1	0	0	1	1	1	0	Ribbon-helix-helix	domain
HTH_8	PF02954.14	gi|15921269|ref|NP_376938.1|	-	0.09	12.3	0.1	0.2	11.1	0.1	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	Fis	family
HTH_1	PF00126.22	gi|15921269|ref|NP_376938.1|	-	0.11	12.3	0.0	0.2	11.4	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
HTH_Crp_2	PF13545.1	gi|15921269|ref|NP_376938.1|	-	0.13	12.0	0.0	0.2	11.4	0.0	1.3	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
Cyanate_lyase	PF02560.9	gi|15921270|ref|NP_376939.1|	-	4.3e-32	109.4	1.1	7.8e-32	108.6	0.0	1.9	2	1	1	3	3	3	1	Cyanate	lyase	C-terminal	domain
HTH_3	PF01381.17	gi|15921270|ref|NP_376939.1|	-	0.032	14.0	0.3	0.052	13.3	0.2	1.3	1	0	0	1	1	1	0	Helix-turn-helix
UreD	PF01774.12	gi|15921271|ref|NP_376940.1|	-	6.2e-10	38.8	0.0	7.9e-10	38.5	0.0	1.1	1	0	0	1	1	1	1	UreD	urease	accessory	protein
DUF2098	PF09871.4	gi|15921271|ref|NP_376940.1|	-	0.12	12.2	0.9	1.4	8.8	0.0	2.4	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2098)
cobW	PF02492.14	gi|15921272|ref|NP_376941.1|	-	2.2e-34	118.4	0.0	2.5e-34	118.2	0.0	1.0	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
ArgK	PF03308.11	gi|15921272|ref|NP_376941.1|	-	1.8e-09	36.7	0.9	6.5e-09	34.9	0.6	1.7	1	1	0	1	1	1	1	ArgK	protein
GTP_EFTU	PF00009.22	gi|15921272|ref|NP_376941.1|	-	1.2e-06	28.0	0.2	0.041	13.2	0.0	2.3	2	0	0	2	2	2	2	Elongation	factor	Tu	GTP	binding	domain
MobB	PF03205.9	gi|15921272|ref|NP_376941.1|	-	7.2e-05	22.5	0.2	0.0006	19.5	0.1	2.2	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NTPase_1	PF03266.10	gi|15921272|ref|NP_376941.1|	-	0.00062	19.5	0.1	0.00088	19.0	0.0	1.4	1	0	0	1	1	1	1	NTPase
AAA_17	PF13207.1	gi|15921272|ref|NP_376941.1|	-	0.00075	20.3	0.6	0.001	19.8	0.4	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|15921272|ref|NP_376941.1|	-	0.0013	19.0	0.5	0.0027	17.9	0.3	1.7	1	1	0	1	1	1	1	AAA	domain
SRP54	PF00448.17	gi|15921272|ref|NP_376941.1|	-	0.0017	17.8	0.1	0.0042	16.5	0.0	2.0	2	1	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
ATP_bind_1	PF03029.12	gi|15921272|ref|NP_376941.1|	-	0.0034	16.9	0.1	0.025	14.0	0.0	2.0	2	0	0	2	2	2	1	Conserved	hypothetical	ATP	binding	protein
ABC_tran	PF00005.22	gi|15921272|ref|NP_376941.1|	-	0.0037	17.5	0.0	0.0058	16.9	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_22	PF13401.1	gi|15921272|ref|NP_376941.1|	-	0.012	15.7	0.0	0.052	13.7	0.0	2.0	2	1	0	2	2	2	0	AAA	domain
AAA_16	PF13191.1	gi|15921272|ref|NP_376941.1|	-	0.028	14.4	0.0	0.052	13.5	0.0	1.5	1	1	0	1	1	1	0	AAA	ATPase	domain
PduV-EutP	PF10662.4	gi|15921272|ref|NP_376941.1|	-	0.043	13.3	0.7	0.33	10.4	0.1	2.6	2	1	1	3	3	3	0	Ethanolamine	utilisation	-	propanediol	utilisation
MMR_HSR1	PF01926.18	gi|15921272|ref|NP_376941.1|	-	0.045	13.6	0.2	0.11	12.4	0.2	1.9	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
DUF87	PF01935.12	gi|15921272|ref|NP_376941.1|	-	0.066	13.0	0.2	0.12	12.1	0.1	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF87
AAA_23	PF13476.1	gi|15921272|ref|NP_376941.1|	-	0.077	13.3	0.2	0.1	12.9	0.1	1.6	1	1	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|15921272|ref|NP_376941.1|	-	0.087	12.2	0.0	0.15	11.4	0.0	1.4	1	0	0	1	1	1	0	AAA-like	domain
AAA_19	PF13245.1	gi|15921272|ref|NP_376941.1|	-	0.089	12.5	0.1	0.26	11.0	0.1	1.8	2	0	0	2	2	1	0	Part	of	AAA	domain
LpxK	PF02606.9	gi|15921272|ref|NP_376941.1|	-	0.12	11.3	0.1	0.18	10.7	0.1	1.3	1	0	0	1	1	1	0	Tetraacyldisaccharide-1-P	4'-kinase
AAA_33	PF13671.1	gi|15921272|ref|NP_376941.1|	-	0.15	11.9	0.0	0.22	11.4	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_28	PF13521.1	gi|15921272|ref|NP_376941.1|	-	0.18	11.7	0.1	0.29	11.0	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
UreF	PF01730.11	gi|15921273|ref|NP_376942.1|	-	2.2e-16	60.2	0.0	2.9e-16	59.9	0.0	1.1	1	0	0	1	1	1	1	UreF
UreE_N	PF02814.10	gi|15921274|ref|NP_376943.1|	-	9.3e-06	25.0	0.0	1.3e-05	24.6	0.0	1.2	1	0	0	1	1	1	1	UreE	urease	accessory	protein,	N-terminal	domain
UreE_C	PF05194.7	gi|15921274|ref|NP_376943.1|	-	0.0055	16.7	0.0	0.0085	16.1	0.0	1.3	1	0	0	1	1	1	1	UreE	urease	accessory	protein,	C-terminal	domain
Amidohydro_1	PF01979.15	gi|161751095|ref|NP_376944.2|	-	2e-51	175.5	2.2	2.5e-51	175.2	1.5	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Urease_alpha	PF00449.15	gi|161751095|ref|NP_376944.2|	-	2.9e-46	156.5	0.6	6.1e-46	155.4	0.4	1.6	1	0	0	1	1	1	1	Urease	alpha-subunit,	N-terminal	domain
Amidohydro_5	PF13594.1	gi|161751095|ref|NP_376944.2|	-	8.1e-10	38.3	0.9	3.3e-09	36.4	0.6	2.2	1	1	0	1	1	1	1	Amidohydrolase
Amidohydro_4	PF13147.1	gi|161751095|ref|NP_376944.2|	-	2e-06	28.0	0.3	0.00035	20.7	0.0	2.8	3	1	0	3	3	3	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|161751095|ref|NP_376944.2|	-	2.5e-06	26.9	6.3	8.4e-05	21.9	0.9	2.2	1	1	1	2	2	2	2	Amidohydrolase	family
Urease_gamma	PF00547.13	gi|15921276|ref|NP_376945.1|	-	1.6e-40	137.0	0.3	3.8e-40	135.8	0.2	1.6	2	0	0	2	2	2	1	Urease,	gamma	subunit
Urease_beta	PF00699.15	gi|15921276|ref|NP_376945.1|	-	3.3e-39	132.7	0.3	1e-38	131.1	0.1	1.8	2	0	0	2	2	2	1	Urease	beta	subunit
Glyco_hydro_32N	PF00251.15	gi|15921276|ref|NP_376945.1|	-	0.052	12.9	0.1	2.5	7.3	0.0	2.0	2	0	0	2	2	2	0	Glycosyl	hydrolases	family	32	N-terminal	domain
Metallophos	PF00149.23	gi|15921277|ref|NP_376946.1|	-	1.7e-09	37.4	2.4	9.5e-09	34.9	1.7	2.2	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|15921277|ref|NP_376946.1|	-	4.1e-08	33.2	0.1	2.9e-07	30.4	0.1	2.1	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos_3	PF14582.1	gi|15921277|ref|NP_376946.1|	-	3.5e-05	23.0	3.6	8.5e-05	21.8	0.1	2.6	3	1	0	3	3	3	1	Metallophosphoesterase,	calcineurin	superfamily
Cellulase	PF00150.13	gi|15921277|ref|NP_376946.1|	-	0.011	14.9	1.4	0.057	12.6	0.4	2.0	2	0	0	2	2	2	0	Cellulase	(glycosyl	hydrolase	family	5)
DUF3364	PF11844.3	gi|15921277|ref|NP_376946.1|	-	0.14	12.2	1.4	0.36	10.8	1.0	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3364)
Amidinotransf	PF02274.12	gi|15921278|ref|NP_376947.1|	-	4.9e-48	163.6	0.0	6.1e-48	163.3	0.0	1.0	1	0	0	1	1	1	1	Amidinotransferase
Cep57_CLD_2	PF14197.1	gi|15921278|ref|NP_376947.1|	-	0.014	15.3	1.3	0.031	14.2	0.9	1.5	1	0	0	1	1	1	0	Centrosome	localisation	domain	of	PPC89
AA_permease	PF00324.16	gi|15921279|ref|NP_376948.1|	-	0.0078	14.5	58.0	0.012	14.0	40.2	1.3	1	0	0	1	1	1	1	Amino	acid	permease
Ldr_toxin	PF13940.1	gi|15921279|ref|NP_376948.1|	-	0.081	12.7	0.2	0.081	12.7	0.1	2.6	3	0	0	3	3	3	0	Toxin	Ldr,	type	I	toxin-antitoxin	system
Cytochrom_B558a	PF05038.8	gi|15921282|ref|NP_376951.1|	-	0.73	9.4	5.0	0.088	12.4	0.6	1.6	2	0	0	2	2	2	0	Cytochrome	Cytochrome	b558	alpha-subunit
ABC_tran	PF00005.22	gi|15921283|ref|NP_376952.1|	-	1.7e-26	93.1	0.2	4e-26	91.9	0.0	1.7	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|15921283|ref|NP_376952.1|	-	1.4e-12	48.1	7.0	4.3e-08	33.4	0.2	2.7	2	1	1	3	3	3	2	AAA	domain
AAA_23	PF13476.1	gi|15921283|ref|NP_376952.1|	-	1.5e-06	28.6	6.2	4e-06	27.3	4.3	1.7	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|15921283|ref|NP_376952.1|	-	7.1e-06	25.4	0.4	0.043	13.0	0.0	2.2	1	1	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|15921283|ref|NP_376952.1|	-	9.8e-05	21.5	9.8	0.0015	17.6	0.1	2.9	2	1	0	3	3	3	2	AAA	ATPase	domain
AAA_29	PF13555.1	gi|15921283|ref|NP_376952.1|	-	0.00058	19.3	0.0	0.001	18.5	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
NACHT	PF05729.7	gi|15921283|ref|NP_376952.1|	-	0.0016	18.1	0.3	0.02	14.5	0.2	2.5	2	1	1	3	3	3	1	NACHT	domain
AAA_22	PF13401.1	gi|15921283|ref|NP_376952.1|	-	0.0018	18.3	0.1	0.0046	17.0	0.0	1.7	2	1	0	2	2	1	1	AAA	domain
AAA_19	PF13245.1	gi|15921283|ref|NP_376952.1|	-	0.0058	16.3	0.0	0.014	15.1	0.0	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
Arch_ATPase	PF01637.13	gi|15921283|ref|NP_376952.1|	-	0.012	15.3	2.4	0.036	13.7	1.6	2.0	1	1	0	1	1	1	0	Archaeal	ATPase
DUF258	PF03193.11	gi|15921283|ref|NP_376952.1|	-	0.026	13.7	0.1	0.047	12.8	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
T2SE	PF00437.15	gi|15921283|ref|NP_376952.1|	-	0.039	12.8	0.2	0.089	11.6	0.2	1.5	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_16	PF13191.1	gi|15921283|ref|NP_376952.1|	-	0.051	13.5	0.1	0.086	12.8	0.1	1.9	1	1	0	1	1	1	0	AAA	ATPase	domain
DUF3584	PF12128.3	gi|15921283|ref|NP_376952.1|	-	0.052	10.8	0.1	0.077	10.3	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
FtsK_SpoIIIE	PF01580.13	gi|15921283|ref|NP_376952.1|	-	0.056	12.9	0.0	0.1	12.0	0.0	1.4	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
AAA_30	PF13604.1	gi|15921283|ref|NP_376952.1|	-	0.063	12.8	0.0	0.1	12.1	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
UPF0079	PF02367.12	gi|15921283|ref|NP_376952.1|	-	0.076	12.6	0.1	0.19	11.3	0.1	1.7	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
PIF1	PF05970.9	gi|15921283|ref|NP_376952.1|	-	0.088	11.7	0.1	0.18	10.6	0.1	1.5	1	1	0	1	1	1	0	PIF1-like	helicase
NTPase_1	PF03266.10	gi|15921283|ref|NP_376952.1|	-	0.088	12.5	2.2	0.97	9.1	0.2	2.9	2	1	0	2	2	2	0	NTPase
cobW	PF02492.14	gi|15921283|ref|NP_376952.1|	-	0.093	12.1	0.5	0.19	11.1	0.3	1.5	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_28	PF13521.1	gi|15921283|ref|NP_376952.1|	-	0.1	12.5	0.0	0.18	11.7	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
MMR_HSR1	PF01926.18	gi|15921283|ref|NP_376952.1|	-	0.11	12.4	0.7	0.17	11.8	0.2	1.7	2	1	0	2	2	2	0	50S	ribosome-binding	GTPase
MobB	PF03205.9	gi|15921283|ref|NP_376952.1|	-	0.13	11.9	0.4	0.44	10.2	0.2	2.0	1	1	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_17	PF13207.1	gi|15921283|ref|NP_376952.1|	-	0.17	12.7	0.9	0.57	11.0	0.6	2.1	1	1	0	1	1	1	0	AAA	domain
AAA_14	PF13173.1	gi|15921283|ref|NP_376952.1|	-	0.26	11.1	3.0	0.69	9.8	0.4	2.6	1	1	1	2	2	2	0	AAA	domain
Peptidase_M50B	PF13398.1	gi|15921285|ref|NP_376954.1|	-	0.075	12.4	0.7	0.075	12.4	0.5	1.0	1	0	0	1	1	1	0	Peptidase	M50B-like
DUF973	PF06157.6	gi|15921287|ref|NP_376956.1|	-	6.4e-103	343.6	43.8	7.2e-103	343.4	30.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
DUF4493	PF14900.1	gi|15921287|ref|NP_376956.1|	-	0.036	13.6	0.5	0.048	13.2	0.3	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4493)
DUF996	PF06195.8	gi|15921287|ref|NP_376956.1|	-	2.5	8.0	40.5	0.2	11.6	16.2	2.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF996)
AAA_10	PF12846.2	gi|15921289|ref|NP_376958.1|	-	1.9e-17	63.6	0.8	8.5e-11	41.8	0.1	2.4	2	0	0	2	2	2	2	AAA-like	domain
DUF87	PF01935.12	gi|15921289|ref|NP_376958.1|	-	4.8e-10	39.6	5.0	6.4e-10	39.2	0.3	2.6	2	1	1	3	3	2	1	Domain	of	unknown	function	DUF87
AAA	PF00004.24	gi|15921289|ref|NP_376958.1|	-	6.7e-09	36.0	0.1	6.1e-05	23.2	0.0	2.7	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
FtsK_SpoIIIE	PF01580.13	gi|15921289|ref|NP_376958.1|	-	2.6e-07	30.3	0.2	8e-05	22.2	0.1	2.3	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
TrwB_AAD_bind	PF10412.4	gi|15921289|ref|NP_376958.1|	-	6.6e-07	28.2	0.0	1.2e-06	27.4	0.0	1.3	1	0	0	1	1	1	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA_22	PF13401.1	gi|15921289|ref|NP_376958.1|	-	1.3e-05	25.3	0.0	0.00044	20.3	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
T2SE	PF00437.15	gi|15921289|ref|NP_376958.1|	-	0.0001	21.3	0.2	0.00022	20.2	0.2	1.5	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_18	PF13238.1	gi|15921289|ref|NP_376958.1|	-	0.00049	20.4	0.3	0.014	15.6	0.0	2.8	2	0	0	2	2	2	1	AAA	domain
Arch_ATPase	PF01637.13	gi|15921289|ref|NP_376958.1|	-	0.00051	19.8	0.4	0.056	13.1	0.0	2.4	2	0	0	2	2	2	1	Archaeal	ATPase
NACHT	PF05729.7	gi|15921289|ref|NP_376958.1|	-	0.00071	19.2	0.1	0.029	14.0	0.0	2.4	2	0	0	2	2	2	1	NACHT	domain
DEAD	PF00270.24	gi|15921289|ref|NP_376958.1|	-	0.0024	17.4	0.0	1.5	8.2	0.0	2.5	2	0	0	2	2	2	2	DEAD/DEAH	box	helicase
DUF853	PF05872.7	gi|15921289|ref|NP_376958.1|	-	0.0044	15.4	0.1	0.65	8.2	0.0	2.1	2	0	0	2	2	2	1	Bacterial	protein	of	unknown	function	(DUF853)
AAA_17	PF13207.1	gi|15921289|ref|NP_376958.1|	-	0.0056	17.4	0.3	0.039	14.7	0.0	2.6	2	1	0	2	2	2	1	AAA	domain
ABC_tran	PF00005.22	gi|15921289|ref|NP_376958.1|	-	0.007	16.6	0.0	0.022	15.0	0.0	1.8	1	0	0	1	1	1	1	ABC	transporter
AAA_14	PF13173.1	gi|15921289|ref|NP_376958.1|	-	0.0086	15.9	0.2	0.33	10.8	0.0	2.6	2	0	0	2	2	2	1	AAA	domain
cobW	PF02492.14	gi|15921289|ref|NP_376958.1|	-	0.0095	15.3	0.1	0.02	14.3	0.1	1.5	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_16	PF13191.1	gi|15921289|ref|NP_376958.1|	-	0.011	15.7	0.0	0.043	13.8	0.0	1.9	2	0	0	2	2	1	0	AAA	ATPase	domain
ResIII	PF04851.10	gi|15921289|ref|NP_376958.1|	-	0.012	15.4	0.0	1.2	8.8	0.0	2.5	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
MobB	PF03205.9	gi|15921289|ref|NP_376958.1|	-	0.013	15.2	0.3	0.033	13.8	0.2	1.7	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_25	PF13481.1	gi|15921289|ref|NP_376958.1|	-	0.016	14.6	0.0	5.2	6.4	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
PduV-EutP	PF10662.4	gi|15921289|ref|NP_376958.1|	-	0.019	14.4	0.1	0.044	13.2	0.1	1.6	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_29	PF13555.1	gi|15921289|ref|NP_376958.1|	-	0.021	14.3	0.0	0.046	13.2	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
HAS-barrel	PF09378.5	gi|15921289|ref|NP_376958.1|	-	0.022	14.6	0.5	0.16	11.8	0.1	2.6	1	1	1	2	2	2	0	HAS	barrel	domain
Miro	PF08477.8	gi|15921289|ref|NP_376958.1|	-	0.028	14.9	0.0	0.088	13.3	0.0	1.9	1	0	0	1	1	1	0	Miro-like	protein
Septin	PF00735.13	gi|15921289|ref|NP_376958.1|	-	0.052	12.5	0.1	0.11	11.4	0.1	1.5	1	0	0	1	1	1	0	Septin
Dynamin_N	PF00350.18	gi|15921289|ref|NP_376958.1|	-	0.065	13.0	0.3	0.23	11.2	0.2	2.0	1	0	0	1	1	1	0	Dynamin	family
Viral_helicase1	PF01443.13	gi|15921289|ref|NP_376958.1|	-	0.068	12.6	0.0	0.13	11.7	0.0	1.4	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
AAA_28	PF13521.1	gi|15921289|ref|NP_376958.1|	-	0.071	13.0	0.0	0.13	12.2	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
NB-ARC	PF00931.17	gi|15921289|ref|NP_376958.1|	-	0.083	11.7	0.0	0.15	10.8	0.0	1.4	1	0	0	1	1	1	0	NB-ARC	domain
DUF2075	PF09848.4	gi|15921289|ref|NP_376958.1|	-	0.09	11.7	0.3	7.5	5.4	0.0	2.3	2	1	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_33	PF13671.1	gi|15921289|ref|NP_376958.1|	-	0.1	12.4	0.1	0.32	10.8	0.0	1.8	2	0	0	2	2	1	0	AAA	domain
AAA_23	PF13476.1	gi|15921289|ref|NP_376958.1|	-	0.37	11.0	6.7	0.5	10.6	0.1	2.4	2	1	0	2	2	2	0	AAA	domain
NurA	PF09376.5	gi|15921290|ref|NP_376959.1|	-	5.6e-27	94.7	3.5	7.2e-27	94.4	2.5	1.1	1	0	0	1	1	1	1	NurA	domain
Cas_DxTHG	PF09455.5	gi|15921291|ref|NP_376960.1|	-	5.7e-43	147.5	13.7	6.7e-43	147.2	9.5	1.0	1	0	0	1	1	1	1	CRISPR-associated	(Cas)	DxTHG	family
Orbi_NS1	PF01718.11	gi|15921291|ref|NP_376960.1|	-	0.0037	15.3	0.1	0.0077	14.3	0.0	1.5	2	0	0	2	2	2	1	Orbivirus	non-structural	protein	NS1,	or	hydrophobic	tubular	protein
RPA_interact_M	PF14767.1	gi|15921291|ref|NP_376960.1|	-	3.1	8.5	8.9	0.21	12.3	2.2	2.0	2	0	0	2	2	2	0	Replication	protein	A	interacting	middle
TENA_THI-4	PF03070.11	gi|15921292|ref|NP_376961.1|	-	1.6e-06	28.0	1.4	5.9e-06	26.1	1.0	1.9	1	1	0	1	1	1	1	TENA/THI-4/PQQC	family
DUF4298	PF14131.1	gi|15921292|ref|NP_376961.1|	-	0.0015	18.3	0.6	0.14	12.0	0.1	2.4	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF4298)
OSR1_C	PF12202.3	gi|15921292|ref|NP_376961.1|	-	0.016	14.7	0.1	0.044	13.4	0.1	1.7	1	0	0	1	1	1	0	Oxidative-stress-responsive	kinase	1	C	terminal
DUF973	PF06157.6	gi|15921293|ref|NP_376962.1|	-	0.25	10.2	13.5	0.52	9.2	9.4	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF973)
CitMHS	PF03600.11	gi|15921293|ref|NP_376962.1|	-	0.43	9.1	10.1	1.5	7.3	7.0	1.8	1	1	0	1	1	1	0	Citrate	transporter
TrmB	PF01978.14	gi|15921294|ref|NP_376963.1|	-	9.9e-11	41.2	0.5	1.7e-10	40.4	0.4	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_11	PF08279.7	gi|15921294|ref|NP_376963.1|	-	1.2e-09	37.6	0.3	2.9e-09	36.4	0.2	1.7	2	0	0	2	2	1	1	HTH	domain
MarR	PF01047.17	gi|15921294|ref|NP_376963.1|	-	6.5e-07	28.9	0.1	1e-06	28.3	0.1	1.4	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.1	gi|15921294|ref|NP_376963.1|	-	2.6e-06	26.7	1.4	4.6e-06	25.9	1.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_Mga	PF08280.6	gi|15921294|ref|NP_376963.1|	-	2e-05	24.2	1.7	3.9e-05	23.3	1.2	1.5	1	0	0	1	1	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
MarR_2	PF12802.2	gi|15921294|ref|NP_376963.1|	-	4.7e-05	22.9	0.0	7.7e-05	22.2	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_5	PF01022.15	gi|15921294|ref|NP_376963.1|	-	6.8e-05	22.4	0.2	0.00011	21.7	0.1	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
Rrf2	PF02082.15	gi|15921294|ref|NP_376963.1|	-	0.00014	21.9	0.0	0.00025	21.1	0.0	1.4	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_34	PF13601.1	gi|15921294|ref|NP_376963.1|	-	0.00016	21.6	0.3	0.00039	20.3	0.1	1.7	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
FeoC	PF09012.5	gi|15921294|ref|NP_376963.1|	-	0.0026	17.4	0.0	0.004	16.8	0.0	1.3	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
HTH_27	PF13463.1	gi|15921294|ref|NP_376963.1|	-	0.0048	17.1	0.1	0.011	16.0	0.0	1.6	2	0	0	2	2	1	1	Winged	helix	DNA-binding	domain
Fe_dep_repress	PF01325.14	gi|15921294|ref|NP_376963.1|	-	0.0061	16.4	0.1	0.017	15.0	0.1	1.8	1	1	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_IclR	PF09339.5	gi|15921294|ref|NP_376963.1|	-	0.0069	15.9	0.0	0.014	14.9	0.0	1.4	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
B-block_TFIIIC	PF04182.7	gi|15921294|ref|NP_376963.1|	-	0.0095	15.7	0.1	0.012	15.4	0.1	1.4	1	0	0	1	1	1	1	B-block	binding	subunit	of	TFIIIC
HTH_28	PF13518.1	gi|15921294|ref|NP_376963.1|	-	0.016	15.1	0.0	0.028	14.4	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
DUF2250	PF10007.4	gi|15921294|ref|NP_376963.1|	-	0.017	15.0	0.2	0.039	13.8	0.2	1.6	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_36	PF13730.1	gi|15921294|ref|NP_376963.1|	-	0.017	15.2	0.5	0.058	13.5	0.1	2.0	2	0	0	2	2	2	0	Helix-turn-helix	domain
GntR	PF00392.16	gi|15921294|ref|NP_376963.1|	-	0.017	14.5	0.1	0.11	11.9	0.0	2.0	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
HTH_Tnp_Tc3_1	PF11427.3	gi|15921294|ref|NP_376963.1|	-	0.023	14.3	0.0	0.041	13.5	0.0	1.4	1	0	0	1	1	1	0	Tc3	transposase
Sigma70_r4	PF04545.11	gi|15921294|ref|NP_376963.1|	-	0.026	13.8	0.0	0.05	12.9	0.0	1.5	1	0	0	1	1	1	0	Sigma-70,	region	4
SelB-wing_3	PF09107.6	gi|15921294|ref|NP_376963.1|	-	0.027	13.8	0.1	0.072	12.4	0.1	1.7	2	0	0	2	2	2	0	Elongation	factor	SelB,	winged	helix
HTH_10	PF04967.7	gi|15921294|ref|NP_376963.1|	-	0.028	13.9	0.0	0.057	13.0	0.0	1.5	1	0	0	1	1	1	0	HTH	DNA	binding	domain
HTH_CodY	PF08222.6	gi|15921294|ref|NP_376963.1|	-	0.029	13.7	0.0	0.057	12.7	0.0	1.5	1	0	0	1	1	1	0	CodY	helix-turn-helix	domain
HTH_45	PF14947.1	gi|15921294|ref|NP_376963.1|	-	0.031	14.0	0.5	0.096	12.5	0.1	1.9	2	0	0	2	2	2	0	Winged	helix-turn-helix
HTH_Crp_2	PF13545.1	gi|15921294|ref|NP_376963.1|	-	0.036	13.8	0.1	0.063	13.0	0.0	1.4	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
TFIIE_alpha	PF02002.12	gi|15921294|ref|NP_376963.1|	-	0.044	13.2	2.6	0.062	12.8	1.8	1.2	1	0	0	1	1	1	0	TFIIE	alpha	subunit
HTH_DeoR	PF08220.7	gi|15921294|ref|NP_376963.1|	-	0.06	12.8	0.0	0.11	12.0	0.0	1.5	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
Sulfolobus_pRN	PF05584.6	gi|15921294|ref|NP_376963.1|	-	0.061	13.3	0.2	0.11	12.5	0.2	1.5	1	0	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
Penicillinase_R	PF03965.11	gi|15921294|ref|NP_376963.1|	-	0.078	13.0	0.1	0.1	12.7	0.1	1.3	1	0	0	1	1	1	0	Penicillinase	repressor
HTH_WhiA	PF02650.9	gi|15921294|ref|NP_376963.1|	-	0.088	13.2	0.5	0.23	11.8	0.1	1.8	2	0	0	2	2	2	0	WhiA	C-terminal	HTH	domain
HTH_20	PF12840.2	gi|15921294|ref|NP_376963.1|	-	0.12	12.1	0.0	0.26	11.1	0.0	1.6	2	0	0	2	2	1	0	Helix-turn-helix	domain
RPA_C	PF08784.6	gi|15921294|ref|NP_376963.1|	-	0.13	12.7	0.0	0.25	11.7	0.0	1.5	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
NUMOD1	PF07453.8	gi|15921294|ref|NP_376963.1|	-	0.32	10.9	4.6	1.8	8.5	0.2	2.9	2	1	1	3	3	2	0	NUMOD1	domain
4HBT_2	PF13279.1	gi|15921296|ref|NP_376965.1|	-	4.8e-09	36.7	0.0	5.6e-09	36.4	0.0	1.1	1	0	0	1	1	1	1	Thioesterase-like	superfamily
4HBT	PF03061.17	gi|15921296|ref|NP_376965.1|	-	2.7e-07	30.6	0.0	3.5e-07	30.2	0.0	1.2	1	0	0	1	1	1	1	Thioesterase	superfamily
Acyl-ACP_TE	PF01643.12	gi|15921296|ref|NP_376965.1|	-	0.053	12.4	0.1	0.06	12.2	0.0	1.2	1	0	0	1	1	1	0	Acyl-ACP	thioesterase
ParA	PF10609.4	gi|15921297|ref|NP_376966.1|	-	7e-14	51.4	0.0	1.4e-13	50.5	0.0	1.5	1	0	0	1	1	1	1	ParA/MinD	ATPase	like
CbiA	PF01656.18	gi|15921297|ref|NP_376966.1|	-	3e-11	43.0	0.3	4.1e-11	42.6	0.2	1.1	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.1	gi|15921297|ref|NP_376966.1|	-	0.00012	22.0	0.2	0.019	14.9	0.0	3.0	3	0	0	3	3	3	1	AAA	domain
ArsA_ATPase	PF02374.10	gi|15921297|ref|NP_376966.1|	-	0.0022	17.0	3.3	0.47	9.4	0.4	3.2	1	1	2	3	3	3	2	Anion-transporting	ATPase
MipZ	PF09140.6	gi|15921297|ref|NP_376966.1|	-	0.037	13.0	0.0	0.052	12.6	0.0	1.2	1	0	0	1	1	1	0	ATPase	MipZ
HypA	PF01155.14	gi|15921298|ref|NP_376967.1|	-	1.1e-19	70.1	0.0	1.5e-19	69.7	0.0	1.1	1	0	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
TFCD_C	PF12612.3	gi|15921298|ref|NP_376967.1|	-	0.0015	17.9	0.2	0.0019	17.6	0.1	1.1	1	0	0	1	1	1	1	Tubulin	folding	cofactor	D	C	terminal
zf-SNAP50_C	PF12251.3	gi|15921298|ref|NP_376967.1|	-	0.023	14.1	0.0	0.026	13.9	0.0	1.1	1	0	0	1	1	1	0	snRNA-activating	protein	of	50kDa	MW	C	terminal
DNA_ligase_ZBD	PF03119.11	gi|15921298|ref|NP_376967.1|	-	0.03	14.0	0.4	2.3	7.9	0.0	2.3	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
DUF3797	PF12677.2	gi|15921298|ref|NP_376967.1|	-	0.071	12.7	0.1	3.7	7.2	0.0	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3797)
Y1_Tnp	PF01797.11	gi|15921300|ref|NP_376969.1|	-	3.9e-43	146.1	0.0	4.4e-43	145.9	0.0	1.0	1	0	0	1	1	1	1	Transposase	IS200	like
OrfB_IS605	PF01385.14	gi|15921301|ref|NP_376970.1|	-	2.8e-12	46.5	0.5	4.4e-12	45.8	0.4	1.3	1	0	0	1	1	1	1	Probable	transposase
OrfB_IS605	PF01385.14	gi|15921302|ref|NP_376971.1|	-	1.6e-56	191.2	6.7	2e-56	190.9	4.7	1.1	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.6	gi|15921302|ref|NP_376971.1|	-	3.8e-19	68.1	0.0	7.2e-19	67.2	0.0	1.5	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
UPF0081	PF03652.10	gi|15921302|ref|NP_376971.1|	-	3.6e-06	27.1	0.0	6.1e-06	26.3	0.0	1.3	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0081)
MFS_1	PF07690.11	gi|15921303|ref|NP_376972.1|	-	1.8e-27	95.9	45.8	2.9e-27	95.2	31.7	1.3	1	0	0	1	1	1	1	Major	Facilitator	Superfamily
MFS_1	PF07690.11	gi|15921304|ref|NP_376973.1|	-	1e-21	77.1	47.2	1e-21	77.1	32.7	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|15921304|ref|NP_376973.1|	-	6.7e-16	57.8	39.3	1e-15	57.2	11.3	3.3	1	1	0	2	2	2	2	Sugar	(and	other)	transporter
SfsA	PF03749.8	gi|15921305|ref|NP_376974.1|	-	4.2e-53	180.0	0.0	5.3e-53	179.6	0.0	1.1	1	0	0	1	1	1	1	Sugar	fermentation	stimulation	protein
PH_3	PF14593.1	gi|15921305|ref|NP_376974.1|	-	0.043	13.6	0.1	0.52	10.2	0.0	2.2	2	0	0	2	2	2	0	PH	domain
Resolvase	PF00239.16	gi|15921306|ref|NP_376975.1|	-	5.1e-14	52.3	0.0	6.4e-14	52.0	0.0	1.1	1	0	0	1	1	1	1	Resolvase,	N	terminal	domain
HTH_17	PF12728.2	gi|15921306|ref|NP_376975.1|	-	0.015	15.5	0.1	0.032	14.4	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
MerR_1	PF13411.1	gi|15921306|ref|NP_376975.1|	-	0.018	14.8	0.1	0.045	13.5	0.0	1.7	1	0	0	1	1	1	0	MerR	HTH	family	regulatory	protein
OrfB_IS605	PF01385.14	gi|15921307|ref|NP_376976.1|	-	3.7e-31	108.3	1.2	6.1e-31	107.5	0.8	1.4	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.6	gi|15921307|ref|NP_376976.1|	-	1.1e-21	76.2	0.0	2.6e-21	75.0	0.0	1.7	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
zinc_ribbon_2	PF13240.1	gi|15921307|ref|NP_376976.1|	-	0.042	13.3	0.9	0.091	12.2	0.6	1.6	1	0	0	1	1	1	0	zinc-ribbon	domain
UPF0547	PF10571.4	gi|15921307|ref|NP_376976.1|	-	0.24	11.1	1.3	2.1	8.1	0.0	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
Amidohydro_2	PF04909.9	gi|15921308|ref|NP_376977.1|	-	1.3e-47	162.7	0.0	1.7e-47	162.2	0.0	1.1	1	0	0	1	1	1	1	Amidohydrolase
PEPCK	PF00821.13	gi|15921309|ref|NP_376978.1|	-	3e-193	643.1	0.0	3.5e-193	642.9	0.0	1.0	1	0	0	1	1	1	1	Phosphoenolpyruvate	carboxykinase
Cohesin	PF00963.13	gi|15921310|ref|NP_376979.1|	-	0.0012	18.6	3.1	0.052	13.4	0.8	2.1	1	1	1	2	2	2	2	Cohesin	domain
DUF4493	PF14900.1	gi|15921310|ref|NP_376979.1|	-	0.01	15.4	2.0	0.011	15.4	1.0	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4493)
Bac_rhamnosid_N	PF08531.5	gi|15921310|ref|NP_376979.1|	-	0.064	12.7	0.5	0.09	12.3	0.4	1.1	1	0	0	1	1	1	0	Alpha-L-rhamnosidase	N-terminal	domain
PKD	PF00801.15	gi|15921310|ref|NP_376979.1|	-	1.1	9.0	3.3	11	5.8	2.3	2.3	1	1	0	1	1	1	0	PKD	domain
HTH_IclR	PF09339.5	gi|15921311|ref|NP_376980.1|	-	1.6e-10	40.4	0.0	2.4e-10	39.8	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_24	PF13412.1	gi|15921311|ref|NP_376980.1|	-	5.6e-09	35.2	0.1	1e-08	34.4	0.1	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.2	gi|15921311|ref|NP_376980.1|	-	7.7e-09	35.1	0.1	1.5e-08	34.2	0.0	1.5	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|15921311|ref|NP_376980.1|	-	1.9e-08	33.8	0.4	2.8e-08	33.3	0.3	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_20	PF12840.2	gi|15921311|ref|NP_376980.1|	-	4.5e-08	32.7	0.0	7.7e-08	32.0	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|15921311|ref|NP_376980.1|	-	2.3e-06	27.1	0.0	4.7e-06	26.1	0.0	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_27	PF13463.1	gi|15921311|ref|NP_376980.1|	-	3.9e-06	27.0	0.1	7.1e-06	26.2	0.1	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_36	PF13730.1	gi|15921311|ref|NP_376980.1|	-	0.0012	18.8	0.1	0.0022	18.0	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_AsnC-type	PF13404.1	gi|15921311|ref|NP_376980.1|	-	0.0012	18.2	0.1	0.0023	17.4	0.1	1.5	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
Rifin_STEVOR	PF02009.11	gi|15921311|ref|NP_376980.1|	-	0.0056	16.3	5.9	1.6	8.3	3.1	2.0	1	1	1	2	2	2	2	Rifin/stevor	family
HTH_28	PF13518.1	gi|15921311|ref|NP_376980.1|	-	0.011	15.6	0.1	0.021	14.8	0.1	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|15921311|ref|NP_376980.1|	-	0.012	15.7	0.1	0.021	14.9	0.0	1.4	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_11	PF08279.7	gi|15921311|ref|NP_376980.1|	-	0.02	14.5	0.1	0.039	13.6	0.1	1.5	1	0	0	1	1	1	0	HTH	domain
Replic_Relax	PF13814.1	gi|15921311|ref|NP_376980.1|	-	0.028	14.2	0.1	0.04	13.7	0.1	1.2	1	0	0	1	1	1	0	Replication-relaxation
Chordopox_A13L	PF05961.6	gi|15921311|ref|NP_376980.1|	-	0.045	13.6	0.1	0.091	12.7	0.0	1.5	2	0	0	2	2	1	0	Chordopoxvirus	A13L	protein
Sigma70_r4	PF04545.11	gi|15921311|ref|NP_376980.1|	-	0.047	12.9	0.0	0.082	12.2	0.0	1.4	1	0	0	1	1	1	0	Sigma-70,	region	4
MarR	PF01047.17	gi|15921311|ref|NP_376980.1|	-	0.048	13.3	0.0	0.086	12.5	0.0	1.4	1	0	0	1	1	1	0	MarR	family
DUF912	PF06024.7	gi|15921311|ref|NP_376980.1|	-	0.051	13.6	0.2	0.077	13.0	0.1	1.3	1	0	0	1	1	1	0	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF912)
HTH_23	PF13384.1	gi|15921311|ref|NP_376980.1|	-	0.055	13.1	0.6	0.11	12.1	0.0	1.8	2	0	0	2	2	2	0	Homeodomain-like	domain
HTH_29	PF13551.1	gi|15921311|ref|NP_376980.1|	-	0.063	13.4	0.2	0.16	12.0	0.0	1.7	1	1	1	2	2	2	0	Winged	helix-turn	helix
DUF3169	PF11368.3	gi|15921311|ref|NP_376980.1|	-	0.082	12.1	0.4	0.13	11.3	0.1	1.5	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3169)
Mga	PF05043.8	gi|15921311|ref|NP_376980.1|	-	0.084	13.1	0.0	0.18	12.1	0.0	1.6	2	0	0	2	2	1	0	Mga	helix-turn-helix	domain
LexA_DNA_bind	PF01726.11	gi|15921311|ref|NP_376980.1|	-	0.088	12.3	0.1	0.18	11.3	0.1	1.7	1	1	0	1	1	1	0	LexA	DNA	binding	domain
DUF2681	PF10883.3	gi|15921311|ref|NP_376980.1|	-	0.098	12.8	0.1	0.14	12.3	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2681)
GIT_SHD	PF08518.6	gi|15921311|ref|NP_376980.1|	-	0.15	11.4	0.3	0.15	11.4	0.2	2.5	2	0	0	2	2	2	0	Spa2	homology	domain	(SHD)	of	GIT
YebO	PF13974.1	gi|15921311|ref|NP_376980.1|	-	5.3	6.8	5.8	3.9	7.3	2.1	2.0	1	1	1	2	2	2	0	YebO-like	protein
Tir_receptor_C	PF07489.6	gi|15921313|ref|NP_376982.1|	-	0.1	12.3	3.5	0.19	11.4	2.4	1.4	1	0	0	1	1	1	0	Translocated	intimin	receptor	(Tir)	C-terminus
TraE	PF05309.6	gi|15921313|ref|NP_376982.1|	-	4.3	6.4	7.9	0.77	8.8	0.6	2.6	2	1	1	3	3	3	0	TraE	protein
Peptidase_M19	PF01244.16	gi|15921314|ref|NP_376983.1|	-	1.6e-71	240.8	0.0	1.8e-71	240.7	0.0	1.0	1	0	0	1	1	1	1	Membrane	dipeptidase	(Peptidase	family	M19)
IF2_N	PF04760.10	gi|15921314|ref|NP_376983.1|	-	0.066	12.8	2.4	1.2	8.8	0.0	3.1	3	0	0	3	3	3	0	Translation	initiation	factor	IF-2,	N-terminal	region
HTH_34	PF13601.1	gi|15921315|ref|NP_376984.1|	-	4.9e-13	48.9	0.6	8.3e-13	48.1	0.1	1.6	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_20	PF12840.2	gi|15921315|ref|NP_376984.1|	-	3.6e-12	45.9	0.0	1.5e-11	43.9	0.0	1.8	1	1	1	2	2	2	1	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|15921315|ref|NP_376984.1|	-	4.9e-06	26.1	1.5	7.6e-06	25.5	0.1	1.9	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
MarR	PF01047.17	gi|15921315|ref|NP_376984.1|	-	4.4e-05	23.1	0.0	9.1e-05	22.0	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HxlR	PF01638.12	gi|15921315|ref|NP_376984.1|	-	0.00097	18.7	0.1	0.0015	18.0	0.0	1.4	1	1	0	1	1	1	1	HxlR-like	helix-turn-helix
DUF2513	PF10711.4	gi|15921315|ref|NP_376984.1|	-	0.0013	18.8	0.1	0.0019	18.2	0.0	1.3	1	0	0	1	1	1	1	Hypothetical	protein	(DUF2513)
HTH_45	PF14947.1	gi|15921315|ref|NP_376984.1|	-	0.0023	17.7	0.3	0.0041	16.9	0.2	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_24	PF13412.1	gi|15921315|ref|NP_376984.1|	-	0.0082	15.5	2.2	0.01	15.1	0.0	2.1	3	0	0	3	3	3	1	Winged	helix-turn-helix	DNA-binding
HTH_IclR	PF09339.5	gi|15921315|ref|NP_376984.1|	-	0.0099	15.4	0.0	0.018	14.5	0.0	1.4	2	0	0	2	2	2	1	IclR	helix-turn-helix	domain
Rrf2	PF02082.15	gi|15921315|ref|NP_376984.1|	-	0.021	14.9	0.1	0.031	14.3	0.0	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
TrmB	PF01978.14	gi|15921315|ref|NP_376984.1|	-	0.024	14.3	0.0	0.05	13.3	0.0	1.5	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|15921315|ref|NP_376984.1|	-	0.028	14.0	0.0	0.04	13.5	0.0	1.3	1	0	0	1	1	1	0	MarR	family
HTH_12	PF08461.5	gi|15921315|ref|NP_376984.1|	-	0.039	13.6	0.0	0.12	12.1	0.0	1.8	1	1	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
TauE	PF01925.14	gi|15921316|ref|NP_376985.1|	-	0.12	11.8	3.8	0.15	11.4	2.6	1.3	1	0	0	1	1	1	0	Sulfite	exporter	TauE/SafE
DUF4516	PF14990.1	gi|15921316|ref|NP_376985.1|	-	0.5	9.9	2.2	0.51	9.9	0.3	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4516)
FA_desaturase	PF00487.19	gi|15921316|ref|NP_376985.1|	-	0.93	8.8	10.3	0.3	10.4	5.1	1.6	1	1	0	1	1	1	0	Fatty	acid	desaturase
ABC_tran	PF00005.22	gi|15921317|ref|NP_376986.1|	-	5.3e-17	62.3	0.0	9.1e-17	61.6	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|15921317|ref|NP_376986.1|	-	8.4e-09	35.7	2.6	1.1e-07	32.1	1.0	2.3	1	1	1	2	2	2	1	AAA	domain
SMC_N	PF02463.14	gi|15921317|ref|NP_376986.1|	-	6.6e-08	32.0	0.2	0.00034	19.8	0.1	2.2	1	1	1	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|15921317|ref|NP_376986.1|	-	3e-07	30.9	0.5	3.3e-07	30.8	0.4	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|15921317|ref|NP_376986.1|	-	1.2e-06	27.9	0.0	2.3e-06	27.0	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
Arch_ATPase	PF01637.13	gi|15921317|ref|NP_376986.1|	-	5.7e-06	26.2	0.2	1.6e-05	24.6	0.2	1.7	1	1	0	1	1	1	1	Archaeal	ATPase
AAA_16	PF13191.1	gi|15921317|ref|NP_376986.1|	-	0.00021	21.3	0.0	0.00071	19.6	0.0	1.8	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_15	PF13175.1	gi|15921317|ref|NP_376986.1|	-	0.00021	20.4	0.7	0.0026	16.8	0.5	2.0	1	1	1	2	2	2	1	AAA	ATPase	domain
AAA_17	PF13207.1	gi|15921317|ref|NP_376986.1|	-	0.00037	21.3	1.1	0.00061	20.5	0.8	1.6	1	1	0	1	1	1	1	AAA	domain
NACHT	PF05729.7	gi|15921317|ref|NP_376986.1|	-	0.0018	17.9	0.1	0.0049	16.5	0.0	1.7	2	0	0	2	2	2	1	NACHT	domain
NTPase_1	PF03266.10	gi|15921317|ref|NP_376986.1|	-	0.0021	17.7	0.0	0.0087	15.7	0.0	1.8	2	0	0	2	2	2	1	NTPase
AAA_19	PF13245.1	gi|15921317|ref|NP_376986.1|	-	0.0021	17.7	0.0	0.0059	16.3	0.0	1.8	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_33	PF13671.1	gi|15921317|ref|NP_376986.1|	-	0.0032	17.3	0.0	0.0063	16.3	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
T2SE	PF00437.15	gi|15921317|ref|NP_376986.1|	-	0.0039	16.1	0.0	0.0056	15.6	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
SbcCD_C	PF13558.1	gi|15921317|ref|NP_376986.1|	-	0.0042	16.9	0.0	0.05	13.5	0.0	2.3	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_18	PF13238.1	gi|15921317|ref|NP_376986.1|	-	0.0046	17.2	0.6	0.0077	16.5	0.4	1.6	1	1	0	1	1	1	1	AAA	domain
Mg_chelatase	PF01078.16	gi|15921317|ref|NP_376986.1|	-	0.0052	15.9	0.0	0.0083	15.3	0.0	1.3	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
AAA_28	PF13521.1	gi|15921317|ref|NP_376986.1|	-	0.0099	15.8	0.2	0.021	14.7	0.0	1.6	2	0	0	2	2	1	1	AAA	domain
AAA_5	PF07728.9	gi|15921317|ref|NP_376986.1|	-	0.011	15.4	0.1	0.021	14.5	0.0	1.6	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA	PF00004.24	gi|15921317|ref|NP_376986.1|	-	0.011	15.8	0.0	0.023	14.9	0.0	1.6	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Rad17	PF03215.10	gi|15921317|ref|NP_376986.1|	-	0.017	13.8	0.0	0.033	12.8	0.0	1.4	2	0	0	2	2	2	0	Rad17	cell	cycle	checkpoint	protein
AAA_14	PF13173.1	gi|15921317|ref|NP_376986.1|	-	0.017	14.9	0.1	0.042	13.7	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
PduV-EutP	PF10662.4	gi|15921317|ref|NP_376986.1|	-	0.018	14.5	0.0	0.031	13.7	0.0	1.3	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_22	PF13401.1	gi|15921317|ref|NP_376986.1|	-	0.021	14.9	0.2	0.064	13.4	0.1	2.1	1	1	1	2	2	2	0	AAA	domain
DUF258	PF03193.11	gi|15921317|ref|NP_376986.1|	-	0.027	13.6	0.0	0.043	13.0	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_24	PF13479.1	gi|15921317|ref|NP_376986.1|	-	0.029	13.9	0.1	0.049	13.2	0.1	1.4	1	0	0	1	1	1	0	AAA	domain
cobW	PF02492.14	gi|15921317|ref|NP_376986.1|	-	0.042	13.3	0.2	0.095	12.1	0.1	1.6	2	0	0	2	2	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_13	PF13166.1	gi|15921317|ref|NP_376986.1|	-	0.044	12.2	0.2	0.068	11.6	0.1	1.3	1	0	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.7	gi|15921317|ref|NP_376986.1|	-	0.047	12.7	0.0	0.078	12.0	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
AAA_10	PF12846.2	gi|15921317|ref|NP_376986.1|	-	0.047	13.1	0.2	0.06	12.7	0.1	1.4	1	1	0	1	1	1	0	AAA-like	domain
FtsK_SpoIIIE	PF01580.13	gi|15921317|ref|NP_376986.1|	-	0.048	13.1	0.1	0.08	12.4	0.0	1.3	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
DUF3584	PF12128.3	gi|15921317|ref|NP_376986.1|	-	0.063	10.6	0.3	0.091	10.0	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
MobB	PF03205.9	gi|15921317|ref|NP_376986.1|	-	0.098	12.3	0.0	0.22	11.2	0.0	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
MutS_V	PF00488.16	gi|15921317|ref|NP_376986.1|	-	0.1	12.0	0.0	0.2	11.0	0.0	1.4	1	0	0	1	1	1	0	MutS	domain	V
ATP-synt_ab	PF00006.20	gi|15921317|ref|NP_376986.1|	-	0.11	12.0	0.0	0.14	11.6	0.0	1.2	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_30	PF13604.1	gi|15921317|ref|NP_376986.1|	-	0.12	11.9	0.0	0.19	11.3	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
Miro	PF08477.8	gi|15921317|ref|NP_376986.1|	-	0.12	12.8	0.0	0.23	11.9	0.0	1.5	1	0	0	1	1	1	0	Miro-like	protein
G-alpha	PF00503.15	gi|15921317|ref|NP_376986.1|	-	0.15	10.6	0.0	0.21	10.2	0.0	1.2	1	0	0	1	1	1	0	G-protein	alpha	subunit
Zn_dep_PLPC	PF00882.13	gi|15921318|ref|NP_376987.1|	-	0.04	13.5	0.0	0.072	12.7	0.0	1.4	1	0	0	1	1	1	0	Zinc	dependent	phospholipase	C
ABC2_membrane_2	PF12679.2	gi|15921318|ref|NP_376987.1|	-	2.6	6.8	25.9	0.049	12.4	12.4	1.9	1	1	1	2	2	2	0	ABC-2	family	transporter	protein
DUF615	PF04751.9	gi|15921321|ref|NP_376990.1|	-	0.02	14.5	0.7	0.03	13.9	0.5	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF615)
OppC_N	PF12911.2	gi|15921323|ref|NP_376992.1|	-	0.01	15.1	1.3	0.03	13.6	0.9	1.8	1	0	0	1	1	1	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
T2SF	PF00482.18	gi|15921323|ref|NP_376992.1|	-	0.37	10.7	1.7	0.61	9.9	1.2	1.3	1	0	0	1	1	1	0	Type	II	secretion	system	(T2SS),	protein	F
EphA2_TM	PF14575.1	gi|15921324|ref|NP_376993.1|	-	0.13	12.6	0.3	0.87	10.0	0.0	2.2	2	0	0	2	2	2	0	Ephrin	type-A	receptor	2	transmembrane	domain
Class_IIIsignal	PF04021.7	gi|15921325|ref|NP_376994.1|	-	1.2	8.9	9.5	0.93	9.3	4.5	2.5	2	0	0	2	2	2	0	Class	III	signal	peptide
Pyr_redox_2	PF07992.9	gi|15921327|ref|NP_376996.1|	-	1.1e-36	126.5	0.1	7.2e-36	123.9	0.0	2.8	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|15921327|ref|NP_376996.1|	-	3.8e-29	100.9	0.2	6.4e-29	100.1	0.1	1.4	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.22	gi|15921327|ref|NP_376996.1|	-	2.3e-12	47.1	0.2	2.3e-12	47.1	0.2	3.1	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|15921327|ref|NP_376996.1|	-	8.6e-08	32.4	0.0	0.00075	19.6	0.0	3.2	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|15921327|ref|NP_376996.1|	-	0.0002	20.3	9.7	0.082	11.7	0.3	3.9	4	0	0	4	4	4	3	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.9	gi|15921327|ref|NP_376996.1|	-	0.0036	15.8	1.5	0.23	9.8	0.0	3.0	3	0	0	3	3	3	1	HI0933-like	protein
Baculo_E56	PF04639.7	gi|15921327|ref|NP_376996.1|	-	0.054	12.1	0.0	0.089	11.4	0.0	1.3	1	0	0	1	1	1	0	Baculoviral	E56	protein,	specific	to	ODV	envelope
Toxin_trans	PF07952.7	gi|15921327|ref|NP_376996.1|	-	0.062	12.1	0.0	0.13	11.1	0.0	1.4	1	0	0	1	1	1	0	Clostridium	neurotoxin,	Translocation	domain
FAD_binding_2	PF00890.19	gi|15921327|ref|NP_376996.1|	-	0.24	10.2	3.8	2.5	6.8	0.0	2.3	2	0	0	2	2	2	0	FAD	binding	domain
HTH_5	PF01022.15	gi|15921328|ref|NP_376997.1|	-	4.8e-17	61.3	2.4	7.7e-17	60.6	1.6	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|15921328|ref|NP_376997.1|	-	9e-10	38.2	0.1	1.3e-09	37.6	0.1	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|15921328|ref|NP_376997.1|	-	1.6e-08	34.1	0.0	2.6e-08	33.4	0.0	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_34	PF13601.1	gi|15921328|ref|NP_376997.1|	-	9.5e-05	22.3	0.1	0.00016	21.6	0.1	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_9	PF08221.6	gi|15921328|ref|NP_376997.1|	-	0.00066	19.4	0.6	0.0016	18.2	0.3	1.7	1	1	0	1	1	1	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
HTH_24	PF13412.1	gi|15921328|ref|NP_376997.1|	-	0.0011	18.2	0.5	0.0019	17.5	0.4	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_38	PF13936.1	gi|15921328|ref|NP_376997.1|	-	0.0015	18.0	0.1	0.0044	16.5	0.0	1.7	2	0	0	2	2	2	1	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|15921328|ref|NP_376997.1|	-	0.0082	16.2	0.1	0.012	15.6	0.0	1.4	1	0	0	1	1	1	1	Transcriptional	regulator
TFIIE_alpha	PF02002.12	gi|15921328|ref|NP_376997.1|	-	0.0099	15.3	0.4	0.016	14.7	0.2	1.6	1	1	0	1	1	1	1	TFIIE	alpha	subunit
Phage_rep_org_N	PF09681.5	gi|15921328|ref|NP_376997.1|	-	0.012	15.1	0.0	0.017	14.7	0.0	1.3	1	0	0	1	1	1	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
HTH_11	PF08279.7	gi|15921328|ref|NP_376997.1|	-	0.038	13.6	0.2	0.065	12.8	0.1	1.4	1	0	0	1	1	1	0	HTH	domain
Sigma70_r4	PF04545.11	gi|15921328|ref|NP_376997.1|	-	0.044	13.0	0.1	0.089	12.1	0.0	1.5	1	0	0	1	1	1	0	Sigma-70,	region	4
Sec3_C_2	PF15278.1	gi|15921328|ref|NP_376997.1|	-	0.071	13.2	0.1	0.15	12.2	0.0	1.5	1	1	0	1	1	1	0	Sec3	exocyst	complex	subunit
HTH_Mga	PF08280.6	gi|15921328|ref|NP_376997.1|	-	0.094	12.4	1.9	0.3	10.8	1.2	2.0	2	0	0	2	2	2	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_23	PF13384.1	gi|15921328|ref|NP_376997.1|	-	0.094	12.3	0.0	0.24	11.1	0.0	1.7	2	0	0	2	2	2	0	Homeodomain-like	domain
zf-ribbon_3	PF13248.1	gi|15921330|ref|NP_376999.1|	-	1.2e-18	65.6	14.0	2e-09	36.3	1.0	2.3	2	0	0	2	2	2	2	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|15921330|ref|NP_376999.1|	-	2e-17	62.0	14.4	2.4e-09	36.3	0.7	2.4	2	0	0	2	2	2	2	zinc-ribbon	domain
DZR	PF12773.2	gi|15921330|ref|NP_376999.1|	-	4.5e-13	48.7	12.3	8.4e-13	47.9	8.5	1.5	1	0	0	1	1	1	1	Double	zinc	ribbon
UPF0547	PF10571.4	gi|15921330|ref|NP_376999.1|	-	3.9e-06	26.4	14.2	0.0022	17.6	0.8	3.3	2	1	0	2	2	2	2	Uncharacterised	protein	family	UPF0547
zf-DHHC	PF01529.15	gi|15921330|ref|NP_376999.1|	-	0.003	16.9	11.9	0.0063	15.9	2.9	2.3	1	1	1	2	2	2	2	DHHC	palmitoyltransferase
OrfB_Zn_ribbon	PF07282.6	gi|15921330|ref|NP_376999.1|	-	0.0093	15.6	9.4	0.72	9.5	2.4	3.0	1	1	0	2	2	2	2	Putative	transposase	DNA-binding	domain
DUF3318	PF11780.3	gi|15921330|ref|NP_376999.1|	-	0.018	14.5	0.0	0.034	13.7	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3318)
zf-NADH-PPase	PF09297.6	gi|15921330|ref|NP_376999.1|	-	0.025	14.0	11.6	0.75	9.3	1.5	3.5	3	1	0	3	3	3	0	NADH	pyrophosphatase	zinc	ribbon	domain
Nudix_N_2	PF14803.1	gi|15921330|ref|NP_376999.1|	-	0.061	13.0	13.6	0.69	9.6	0.3	4.1	4	0	0	4	4	4	0	Nudix	N-terminal
PolC_DP2	PF03833.8	gi|15921330|ref|NP_376999.1|	-	0.064	10.9	5.7	0.079	10.6	4.0	1.0	1	0	0	1	1	1	0	DNA	polymerase	II	large	subunit	DP2
zf-HIT	PF04438.11	gi|15921330|ref|NP_376999.1|	-	0.68	9.6	11.2	2	8.1	2.8	3.1	3	0	0	3	3	3	0	HIT	zinc	finger
zf-tcix	PF14952.1	gi|15921330|ref|NP_376999.1|	-	2.5	7.5	15.6	0.051	12.9	2.6	2.9	3	0	0	3	3	3	0	Putative	treble-clef,	zinc-finger,	Zn-binding
Cript	PF10235.4	gi|15921330|ref|NP_376999.1|	-	5.2	7.4	14.5	2.4	8.5	2.5	2.5	1	1	1	2	2	2	0	Microtubule-associated	protein	CRIPT
NOB1_Zn_bind	PF08772.6	gi|15921330|ref|NP_376999.1|	-	6	6.7	13.2	67	3.4	3.1	2.7	1	1	2	3	3	3	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
HypA	PF01155.14	gi|15921330|ref|NP_376999.1|	-	8.5	6.1	10.0	8.4	6.1	3.5	2.2	1	1	1	2	2	2	0	Hydrogenase	expression/synthesis	hypA	family
zf-RanBP	PF00641.13	gi|15921330|ref|NP_376999.1|	-	9.4	5.4	10.3	0.1	11.7	1.4	2.0	2	0	0	2	2	2	0	Zn-finger	in	Ran	binding	protein	and	others
TF_Zn_Ribbon	PF08271.7	gi|15921330|ref|NP_376999.1|	-	9.5	5.6	13.0	1.2	8.5	1.5	2.9	2	2	0	2	2	2	0	TFIIB	zinc-binding
USP7_C2	PF14533.1	gi|15921331|ref|NP_377000.1|	-	0.0015	18.0	2.8	0.0017	17.8	1.9	1.1	1	0	0	1	1	1	1	Ubiquitin-specific	protease	C-terminal
IMD	PF08397.6	gi|15921331|ref|NP_377000.1|	-	0.0031	16.8	2.3	0.0032	16.8	1.6	1.1	1	0	0	1	1	1	1	IRSp53/MIM	homology	domain
PqqD	PF05402.7	gi|15921331|ref|NP_377000.1|	-	0.0045	16.9	0.1	0.045	13.7	0.0	2.1	2	0	0	2	2	2	1	Coenzyme	PQQ	synthesis	protein	D	(PqqD)
UBA_e1_C	PF09358.5	gi|15921331|ref|NP_377000.1|	-	0.0073	16.4	2.4	0.0091	16.1	1.7	1.2	1	0	0	1	1	1	1	Ubiquitin-activating	enzyme	e1	C-terminal	domain
EF1G	PF00647.14	gi|15921331|ref|NP_377000.1|	-	0.0078	15.9	0.6	0.032	13.9	0.1	1.9	1	1	1	2	2	2	1	Elongation	factor	1	gamma,	conserved	domain
Clusterin	PF01093.12	gi|15921331|ref|NP_377000.1|	-	0.021	13.6	0.8	0.022	13.5	0.6	1.1	1	0	0	1	1	1	0	Clusterin
L31	PF09784.4	gi|15921331|ref|NP_377000.1|	-	0.021	14.8	0.6	0.025	14.6	0.4	1.3	1	1	0	1	1	1	0	Mitochondrial	ribosomal	protein	L31
Penicillinase_R	PF03965.11	gi|15921331|ref|NP_377000.1|	-	0.031	14.3	0.2	0.039	14.0	0.1	1.2	1	0	0	1	1	1	0	Penicillinase	repressor
Eaf7	PF07904.8	gi|15921331|ref|NP_377000.1|	-	0.035	14.0	2.5	0.85	9.6	1.8	2.0	1	1	0	1	1	1	0	Chromatin	modification-related	protein	EAF7
DUF2117	PF09890.4	gi|15921331|ref|NP_377000.1|	-	0.048	12.8	1.4	0.058	12.5	0.9	1.0	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2117)
DUF1803	PF08820.5	gi|15921331|ref|NP_377000.1|	-	0.11	12.2	1.6	0.18	11.5	1.1	1.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1803)
ATP-cone	PF03477.11	gi|15921331|ref|NP_377000.1|	-	0.19	12.2	2.7	0.47	10.9	0.7	2.0	1	1	1	2	2	2	0	ATP	cone	domain
Fib_alpha	PF08702.5	gi|15921331|ref|NP_377000.1|	-	0.23	11.5	3.9	0.74	9.9	2.7	1.7	1	1	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
SHOCT	PF09851.4	gi|15921332|ref|NP_377001.1|	-	0.12	11.9	0.0	0.25	10.8	0.0	1.5	1	0	0	1	1	1	0	Short	C-terminal	domain
YbjQ_1	PF01906.12	gi|15921333|ref|NP_377002.1|	-	1.2e-36	125.3	2.5	1.3e-36	125.1	1.8	1.0	1	0	0	1	1	1	1	Putative	heavy-metal-binding
SeleniumBinding	PF11524.3	gi|15921333|ref|NP_377002.1|	-	6e-05	23.1	0.4	0.12	12.5	0.0	2.2	2	0	0	2	2	2	2	Selenium	binding	protein
AP_endonuc_2	PF01261.19	gi|15921333|ref|NP_377002.1|	-	0.024	13.8	0.0	0.027	13.7	0.0	1.2	1	0	0	1	1	1	0	Xylose	isomerase-like	TIM	barrel
MFS_1	PF07690.11	gi|15921334|ref|NP_377003.1|	-	1.6e-08	33.7	16.4	3.9e-08	32.4	11.2	1.4	1	1	0	1	1	1	1	Major	Facilitator	Superfamily
HTH_23	PF13384.1	gi|15921335|ref|NP_377004.1|	-	3.8e-08	32.7	0.1	9e-08	31.5	0.1	1.7	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.1	gi|15921335|ref|NP_377004.1|	-	3.6e-07	30.0	0.1	8.6e-07	28.8	0.1	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
Terminase_5	PF06056.7	gi|15921335|ref|NP_377004.1|	-	3e-06	26.6	0.1	6.3e-06	25.6	0.0	1.5	1	0	0	1	1	1	1	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_38	PF13936.1	gi|15921335|ref|NP_377004.1|	-	1.3e-05	24.6	0.0	2.2e-05	23.9	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
DDE_Tnp_IS1	PF03400.8	gi|15921335|ref|NP_377004.1|	-	0.00011	22.2	1.9	0.00026	21.0	1.3	1.6	1	0	0	1	1	1	1	IS1	transposase
Zn_Tnp_IS1	PF03811.8	gi|15921335|ref|NP_377004.1|	-	0.00012	21.4	6.4	0.00028	20.3	4.4	1.6	1	0	0	1	1	1	1	InsA	N-terminal	domain
Sigma70_r4_2	PF08281.7	gi|15921335|ref|NP_377004.1|	-	0.00018	20.9	0.0	0.00034	20.0	0.0	1.4	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_29	PF13551.1	gi|15921335|ref|NP_377004.1|	-	0.00038	20.5	0.0	0.00068	19.7	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_Tnp_1	PF01527.15	gi|15921335|ref|NP_377004.1|	-	0.011	15.7	0.1	0.024	14.5	0.0	1.6	1	0	0	1	1	1	0	Transposase
HTH_40	PF14493.1	gi|15921335|ref|NP_377004.1|	-	0.011	15.9	0.0	0.017	15.3	0.0	1.5	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_Tnp_ISL3	PF13542.1	gi|15921335|ref|NP_377004.1|	-	0.014	14.5	0.0	0.036	13.2	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	transposase	family	ISL3
Zn_Tnp_IS1595	PF12760.2	gi|15921335|ref|NP_377004.1|	-	0.019	14.7	4.2	0.043	13.6	2.9	1.6	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
HTH_Tnp_IS630	PF01710.11	gi|15921335|ref|NP_377004.1|	-	0.034	13.8	0.3	0.034	13.8	0.2	1.9	2	1	0	2	2	2	0	Transposase
OrfB_Zn_ribbon	PF07282.6	gi|15921335|ref|NP_377004.1|	-	0.077	12.6	1.5	0.19	11.3	1.0	1.6	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
GerE	PF00196.14	gi|15921335|ref|NP_377004.1|	-	0.12	11.7	0.0	0.23	10.7	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
DZR	PF12773.2	gi|15921335|ref|NP_377004.1|	-	0.37	10.6	3.4	6.1	6.7	2.3	2.1	1	1	0	1	1	1	0	Double	zinc	ribbon
Zn-ribbon_8	PF09723.5	gi|15921335|ref|NP_377004.1|	-	0.51	10.3	4.5	3.1	7.8	0.4	2.6	2	0	0	2	2	2	0	Zinc	ribbon	domain
Lar_restr_allev	PF14354.1	gi|15921335|ref|NP_377004.1|	-	0.91	9.8	3.1	1	9.7	0.4	2.2	2	0	0	2	2	2	0	Restriction	alleviation	protein	Lar
zf-ISL3	PF14690.1	gi|15921335|ref|NP_377004.1|	-	2.8	8.0	11.4	16	5.5	1.0	2.9	1	1	2	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-ribbon_3	PF13248.1	gi|15921335|ref|NP_377004.1|	-	3.6	6.9	5.2	28	4.1	2.2	2.8	2	1	0	2	2	2	0	zinc-ribbon	domain
Nudix_N_2	PF14803.1	gi|15921335|ref|NP_377004.1|	-	4.8	6.9	6.8	11	5.7	4.7	1.6	1	0	0	1	1	1	0	Nudix	N-terminal
DUF4145	PF13643.1	gi|15921336|ref|NP_377005.1|	-	0.0056	16.5	0.2	0.016	15.0	0.0	1.8	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4145)
Toxin_5	PF05294.8	gi|15921336|ref|NP_377005.1|	-	0.034	14.3	1.6	0.17	12.0	0.1	2.1	2	0	0	2	2	2	0	Scorpion	short	toxin
GATase_6	PF13522.1	gi|15921336|ref|NP_377005.1|	-	0.057	13.3	0.0	0.099	12.6	0.0	1.3	1	0	0	1	1	1	0	Glutamine	amidotransferase	domain
DrsE	PF02635.10	gi|15921337|ref|NP_377006.1|	-	4.2e-06	26.8	0.0	4.5e-06	26.7	0.0	1.1	1	0	0	1	1	1	1	DsrE/DsrF-like	family
HEPN	PF05168.9	gi|15921338|ref|NP_377007.1|	-	1e-25	89.9	0.1	1.1e-25	89.7	0.1	1.0	1	0	0	1	1	1	1	HEPN	domain
NTP_transf_2	PF01909.18	gi|15921339|ref|NP_377008.1|	-	9e-11	41.9	1.3	1.4e-10	41.3	0.8	1.4	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
NTF-like	PF14540.1	gi|15921339|ref|NP_377008.1|	-	0.048	13.2	0.1	0.098	12.2	0.1	1.5	1	1	0	1	1	1	0	Nucleotidyltransferase-like
DUF294	PF03445.8	gi|15921339|ref|NP_377008.1|	-	0.071	12.7	0.0	0.077	12.6	0.0	1.3	1	0	0	1	1	1	0	Putative	nucleotidyltransferase	DUF294
Sushi	PF00084.15	gi|15921339|ref|NP_377008.1|	-	0.078	13.3	0.1	0.15	12.4	0.0	1.4	1	0	0	1	1	1	0	Sushi	domain	(SCR	repeat)
EamA	PF00892.15	gi|15921340|ref|NP_377009.1|	-	1.3e-33	115.7	31.6	1.4e-19	70.3	6.4	2.3	2	0	0	2	2	2	2	EamA-like	transporter	family
EmrE	PF13536.1	gi|15921340|ref|NP_377009.1|	-	0.00015	21.9	24.2	0.00079	19.6	4.6	3.0	1	1	1	3	3	3	2	Multidrug	resistance	efflux	transporter
Reo_sigmaC	PF04582.7	gi|15921342|ref|NP_377011.1|	-	1e-09	38.0	13.6	1.1e-05	24.8	2.7	2.3	1	1	1	2	2	2	2	Reovirus	sigma	C	capsid	protein
Fib_alpha	PF08702.5	gi|15921342|ref|NP_377011.1|	-	4.2e-09	36.6	30.9	0.013	15.6	4.9	4.4	1	1	3	4	4	4	4	Fibrinogen	alpha/beta	chain	family
DUF16	PF01519.11	gi|15921342|ref|NP_377011.1|	-	1.4e-07	31.6	43.6	0.0038	17.4	2.5	5.0	2	1	3	5	5	4	3	Protein	of	unknown	function	DUF16
DUF2383	PF09537.5	gi|15921342|ref|NP_377011.1|	-	3.5e-07	30.4	21.5	0.079	13.2	0.6	4.6	2	1	3	5	5	4	3	Domain	of	unknown	function	(DUF2383)
DUF3972	PF13118.1	gi|15921342|ref|NP_377011.1|	-	1e-06	28.8	22.2	0.00091	19.3	0.6	4.0	1	1	0	2	2	2	1	Protein	of	unknown	function	(DUF3972)
AAA_13	PF13166.1	gi|15921342|ref|NP_377011.1|	-	1.1e-06	27.4	28.3	5.4e-06	25.1	19.5	1.8	1	1	0	1	1	1	1	AAA	domain
TMF_DNA_bd	PF12329.3	gi|15921342|ref|NP_377011.1|	-	1.1e-06	28.2	41.1	0.0098	15.6	7.1	3.9	1	1	2	3	3	3	3	TATA	element	modulatory	factor	1	DNA	binding
ATG16	PF08614.6	gi|15921342|ref|NP_377011.1|	-	3.9e-06	26.8	30.0	0.0038	17.0	1.7	3.1	1	1	2	3	3	3	3	Autophagy	protein	16	(ATG16)
IncA	PF04156.9	gi|15921342|ref|NP_377011.1|	-	6.1e-06	25.9	35.5	2.8e-05	23.8	20.2	2.2	1	1	1	2	2	2	2	IncA	protein
WEMBL	PF05701.6	gi|15921342|ref|NP_377011.1|	-	8.5e-06	24.5	31.3	1.4e-05	23.8	21.7	1.3	1	0	0	1	1	1	1	Weak	chloroplast	movement	under	blue	light
DUF1296	PF06972.6	gi|15921342|ref|NP_377011.1|	-	1.7e-05	24.6	14.2	0.41	10.6	0.2	5.7	1	1	4	5	5	4	1	Protein	of	unknown	function	(DUF1296)
Myosin_tail_1	PF01576.14	gi|15921342|ref|NP_377011.1|	-	1.8e-05	22.7	26.3	2.7e-05	22.1	18.2	1.2	1	0	0	1	1	1	1	Myosin	tail
Atg14	PF10186.4	gi|15921342|ref|NP_377011.1|	-	4e-05	22.6	32.7	0.0077	15.2	9.6	2.2	1	1	1	2	2	2	2	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
Fusion_gly	PF00523.13	gi|15921342|ref|NP_377011.1|	-	6.2e-05	21.2	24.6	0.032	12.3	1.6	3.6	1	1	3	4	4	4	3	Fusion	glycoprotein	F0
Spc7	PF08317.6	gi|15921342|ref|NP_377011.1|	-	8.2e-05	21.4	31.5	0.0001	21.1	16.1	2.1	1	1	1	2	2	2	1	Spc7	kinetochore	protein
AAA_27	PF13514.1	gi|15921342|ref|NP_377011.1|	-	8.3e-05	20.5	28.9	0.00011	20.0	20.0	1.0	1	0	0	1	1	1	1	AAA	domain
Arfaptin	PF06456.8	gi|15921342|ref|NP_377011.1|	-	0.0001	21.7	6.4	0.0001	21.7	4.4	2.2	1	1	1	2	2	2	1	Arfaptin-like	domain
Filament	PF00038.16	gi|15921342|ref|NP_377011.1|	-	0.00013	21.5	29.6	0.12	11.8	9.1	3.0	1	1	2	3	3	3	2	Intermediate	filament	protein
SlyX	PF04102.7	gi|15921342|ref|NP_377011.1|	-	0.00019	21.7	34.4	0.016	15.5	4.5	4.3	1	1	4	5	5	5	2	SlyX
FlgN	PF05130.7	gi|15921342|ref|NP_377011.1|	-	0.00021	21.5	35.2	0.0012	19.1	15.2	3.0	1	1	2	3	3	3	2	FlgN	protein
DUF1664	PF07889.7	gi|15921342|ref|NP_377011.1|	-	0.00039	20.1	23.9	0.11	12.2	8.3	3.3	1	1	3	4	4	4	2	Protein	of	unknown	function	(DUF1664)
ADIP	PF11559.3	gi|15921342|ref|NP_377011.1|	-	0.00043	20.1	31.4	0.073	12.9	10.0	2.7	1	1	2	3	3	3	2	Afadin-	and	alpha	-actinin-Binding
DUF948	PF06103.6	gi|15921342|ref|NP_377011.1|	-	0.00094	18.9	22.6	0.015	15.1	4.6	3.3	1	1	2	3	3	3	2	Bacterial	protein	of	unknown	function	(DUF948)
Corona_S2	PF01601.11	gi|15921342|ref|NP_377011.1|	-	0.00097	17.3	18.9	0.031	12.3	0.6	3.1	1	1	2	3	3	3	2	Coronavirus	S2	glycoprotein
Lebercilin	PF15619.1	gi|15921342|ref|NP_377011.1|	-	0.0012	18.3	26.5	0.0012	18.3	15.7	1.8	1	1	0	1	1	1	1	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
DUF1626	PF07788.6	gi|15921342|ref|NP_377011.1|	-	0.0012	18.5	1.9	0.0028	17.3	1.3	1.7	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1626)
DUF3584	PF12128.3	gi|15921342|ref|NP_377011.1|	-	0.0024	15.3	24.0	0.0033	14.8	16.6	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3584)
Bacillus_HBL	PF05791.6	gi|15921342|ref|NP_377011.1|	-	0.0025	17.2	25.1	0.046	13.0	7.8	2.9	1	1	2	3	3	3	1	Bacillus	haemolytic	enterotoxin	(HBL)
MCPsignal	PF00015.16	gi|15921342|ref|NP_377011.1|	-	0.0027	17.2	28.1	0.089	12.3	11.5	2.1	1	1	1	2	2	2	2	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
ATG_C	PF09333.6	gi|15921342|ref|NP_377011.1|	-	0.0028	17.7	14.8	0.27	11.4	0.9	3.6	1	1	2	3	3	3	1	ATG	C	terminal	domain
Transposase_22	PF02994.9	gi|15921342|ref|NP_377011.1|	-	0.0029	16.1	23.3	0.0062	15.0	16.2	1.6	1	1	0	1	1	1	1	L1	transposable	element
TPR_1	PF00515.23	gi|15921342|ref|NP_377011.1|	-	0.0033	16.9	15.9	2.6	7.8	0.1	6.9	5	2	2	7	7	6	0	Tetratricopeptide	repeat
COG5	PF10392.4	gi|15921342|ref|NP_377011.1|	-	0.0034	17.3	21.3	0.018	15.0	9.6	2.7	1	1	1	2	2	2	1	Golgi	transport	complex	subunit	5
Apc5	PF12862.2	gi|15921342|ref|NP_377011.1|	-	0.005	16.6	16.2	2.6	7.9	0.8	5.5	1	1	3	6	6	6	0	Anaphase-promoting	complex	subunit	5
DUF2959	PF11172.3	gi|15921342|ref|NP_377011.1|	-	0.0053	16.5	18.0	0.2	11.4	1.3	3.1	1	1	1	3	3	3	2	Protein	of	unknown	function	(DUF2959)
AATF-Che1	PF13339.1	gi|15921342|ref|NP_377011.1|	-	0.0054	16.8	18.6	0.16	12.0	5.1	2.5	1	1	1	2	2	2	2	Apoptosis	antagonizing	transcription	factor
Cast	PF10174.4	gi|15921342|ref|NP_377011.1|	-	0.0055	14.8	27.7	0.011	13.8	10.4	2.2	1	1	2	3	3	3	2	RIM-binding	protein	of	the	cytomatrix	active	zone
PMEI	PF04043.10	gi|15921342|ref|NP_377011.1|	-	0.0056	16.5	8.2	0.14	12.0	1.3	2.2	1	1	1	2	2	2	1	Plant	invertase/pectin	methylesterase	inhibitor
DUF1759	PF03564.10	gi|15921342|ref|NP_377011.1|	-	0.0066	16.2	15.5	0.033	14.0	1.6	3.1	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF1759)
Tropomyosin_1	PF12718.2	gi|15921342|ref|NP_377011.1|	-	0.0069	16.2	31.9	0.013	15.3	12.3	2.4	1	1	1	2	2	2	1	Tropomyosin	like
TPR_11	PF13414.1	gi|15921342|ref|NP_377011.1|	-	0.0072	15.9	11.7	0.52	10.0	0.4	5.1	1	1	4	5	5	5	1	TPR	repeat
DUF4164	PF13747.1	gi|15921342|ref|NP_377011.1|	-	0.0083	16.2	22.4	1.8	8.7	3.8	4.8	1	1	3	4	4	4	0	Domain	of	unknown	function	(DUF4164)
Spectrin	PF00435.16	gi|15921342|ref|NP_377011.1|	-	0.0097	16.1	28.1	0.3	11.4	9.5	2.9	1	1	1	2	2	2	1	Spectrin	repeat
DUF848	PF05852.6	gi|15921342|ref|NP_377011.1|	-	0.0099	15.7	22.9	0.52	10.1	3.1	3.0	1	1	2	3	3	3	1	Gammaherpesvirus	protein	of	unknown	function	(DUF848)
APG17	PF04108.7	gi|15921342|ref|NP_377011.1|	-	0.011	14.6	20.7	0.062	12.0	6.1	2.2	1	1	1	2	2	2	0	Autophagy	protein	Apg17
TPR_MLP1_2	PF07926.7	gi|15921342|ref|NP_377011.1|	-	0.012	15.3	36.3	0.2	11.4	6.1	2.4	1	1	1	2	2	2	0	TPR/MLP1/MLP2-like	protein
BLOC1_2	PF10046.4	gi|15921342|ref|NP_377011.1|	-	0.013	15.6	29.1	0.49	10.5	4.6	3.5	1	1	2	3	3	3	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
MutS_III	PF05192.13	gi|15921342|ref|NP_377011.1|	-	0.014	15.2	15.3	0.02	14.6	10.1	1.6	1	1	1	2	2	2	0	MutS	domain	III
DUF4175	PF13779.1	gi|15921342|ref|NP_377011.1|	-	0.015	13.0	23.1	0.082	10.5	16.0	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4175)
DUF812	PF05667.6	gi|15921342|ref|NP_377011.1|	-	0.015	13.8	30.7	0.033	12.7	21.3	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF812)
zf-C4H2	PF10146.4	gi|15921342|ref|NP_377011.1|	-	0.016	15.2	22.5	0.43	10.5	9.0	2.2	1	1	1	2	2	2	0	Zinc	finger-containing	protein
Filo_VP35	PF02097.10	gi|15921342|ref|NP_377011.1|	-	0.017	14.3	18.6	0.25	10.5	4.3	2.8	1	1	2	3	3	3	0	Filoviridae	VP35
NPV_P10	PF05531.7	gi|15921342|ref|NP_377011.1|	-	0.017	15.3	30.7	0.2	11.9	5.2	4.7	1	1	4	5	5	5	0	Nucleopolyhedrovirus	P10	protein
ING	PF12998.2	gi|15921342|ref|NP_377011.1|	-	0.018	15.3	22.6	0.17	12.1	10.1	2.6	1	1	1	2	2	2	0	Inhibitor	of	growth	proteins	N-terminal	histone-binding
Prefoldin	PF02996.12	gi|15921342|ref|NP_377011.1|	-	0.022	14.4	32.3	0.43	10.2	3.0	4.7	1	1	4	5	5	5	0	Prefoldin	subunit
DUF4407	PF14362.1	gi|15921342|ref|NP_377011.1|	-	0.024	13.5	30.3	0.5	9.2	11.6	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4407)
Gp58	PF07902.6	gi|15921342|ref|NP_377011.1|	-	0.025	12.8	16.8	0.36	8.9	2.7	2.3	1	1	1	2	2	2	0	gp58-like	protein
HEAT_PBS	PF03130.11	gi|15921342|ref|NP_377011.1|	-	0.027	14.8	13.1	15	6.3	0.0	5.9	4	3	0	4	4	4	0	PBS	lyase	HEAT-like	repeat
DUF677	PF05055.7	gi|15921342|ref|NP_377011.1|	-	0.03	13.0	22.2	0.062	11.9	6.8	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF677)
DUF904	PF06005.7	gi|15921342|ref|NP_377011.1|	-	0.031	14.5	32.7	0.36	11.1	5.4	4.6	1	1	3	4	4	4	0	Protein	of	unknown	function	(DUF904)
Mnd1	PF03962.10	gi|15921342|ref|NP_377011.1|	-	0.034	13.8	27.8	0.18	11.4	9.5	2.5	1	1	1	2	2	2	0	Mnd1	family
HsbA	PF12296.3	gi|15921342|ref|NP_377011.1|	-	0.035	13.9	19.7	0.21	11.4	8.2	2.6	1	1	1	2	2	2	0	Hydrophobic	surface	binding	protein	A
TFR_dimer	PF04253.10	gi|15921342|ref|NP_377011.1|	-	0.035	13.6	9.2	2	7.9	0.3	4.0	1	1	4	5	5	5	0	Transferrin	receptor-like	dimerisation	domain
TPR_12	PF13424.1	gi|15921342|ref|NP_377011.1|	-	0.035	14.0	1.0	0.035	14.0	0.7	4.7	2	1	2	4	4	3	0	Tetratricopeptide	repeat
PhageMin_Tail	PF10145.4	gi|15921342|ref|NP_377011.1|	-	0.037	13.6	12.2	0.64	9.6	1.3	2.2	1	1	1	2	2	2	0	Phage-related	minor	tail	protein
BAR	PF03114.13	gi|15921342|ref|NP_377011.1|	-	0.042	13.3	16.2	0.25	10.7	8.8	2.2	1	1	1	2	2	2	0	BAR	domain
NEP	PF10167.4	gi|15921342|ref|NP_377011.1|	-	0.047	13.3	17.6	0.45	10.2	3.9	2.9	1	1	1	2	2	2	0	Uncharacterised	conserved	protein
Alpha-2-MRAP_C	PF06401.6	gi|15921342|ref|NP_377011.1|	-	0.053	13.3	14.2	0.43	10.4	3.1	2.9	1	1	2	3	3	3	0	Alpha-2-macroglobulin	RAP,	C-terminal	domain
EzrA	PF06160.7	gi|15921342|ref|NP_377011.1|	-	0.055	11.6	28.4	0.25	9.4	19.7	1.8	1	1	0	1	1	1	0	Septation	ring	formation	regulator,	EzrA
DUF148	PF02520.12	gi|15921342|ref|NP_377011.1|	-	0.061	13.1	29.4	1.3	8.8	10.3	3.0	1	1	2	3	3	3	0	Domain	of	unknown	function	DUF148
GAS	PF13851.1	gi|15921342|ref|NP_377011.1|	-	0.071	12.2	29.8	1	8.5	19.9	2.3	1	1	1	2	2	2	0	Growth-arrest	specific	micro-tubule	binding
DUF3818	PF12825.2	gi|15921342|ref|NP_377011.1|	-	0.073	11.7	16.4	0.61	8.7	0.7	3.3	1	1	2	3	3	3	0	Domain	of	unknown	function	in	PX-proteins	(DUF3818)
DUF4200	PF13863.1	gi|15921342|ref|NP_377011.1|	-	0.077	12.9	35.4	0.13	12.2	8.8	3.6	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF4200)
CENP-Q	PF13094.1	gi|15921342|ref|NP_377011.1|	-	0.082	12.9	32.6	15	5.5	12.9	3.5	1	1	2	3	3	3	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
Acyl-CoA_dh_C	PF12806.2	gi|15921342|ref|NP_377011.1|	-	0.09	12.6	19.8	2.6	7.8	0.8	4.2	1	1	4	5	5	5	0	Acetyl-CoA	dehydrogenase	C-terminal	like
BCDHK_Adom3	PF10436.4	gi|15921342|ref|NP_377011.1|	-	0.11	12.0	11.1	1.5	8.3	1.0	2.5	1	1	1	2	2	2	0	Mitochondrial	branched-chain	alpha-ketoacid	dehydrogenase	kinase
TPR_14	PF13428.1	gi|15921342|ref|NP_377011.1|	-	0.11	13.2	11.8	40	5.2	0.4	5.8	2	1	3	6	6	5	0	Tetratricopeptide	repeat
RPN7	PF10602.4	gi|15921342|ref|NP_377011.1|	-	0.13	11.6	9.8	0.052	12.9	1.6	2.8	1	1	1	3	3	3	0	26S	proteasome	subunit	RPN7
HOOK	PF05622.7	gi|15921342|ref|NP_377011.1|	-	0.13	10.0	29.0	0.3	8.8	19.8	1.5	1	1	0	1	1	1	0	HOOK	protein
TMP_2	PF06791.8	gi|15921342|ref|NP_377011.1|	-	0.13	11.8	20.3	0.42	10.1	4.4	2.4	1	1	1	2	2	2	0	Prophage	tail	length	tape	measure	protein
DUF3610	PF12272.3	gi|15921342|ref|NP_377011.1|	-	0.14	11.7	2.7	2.2	7.9	0.7	2.4	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF3610)
SPX	PF03105.14	gi|15921342|ref|NP_377011.1|	-	0.15	11.8	8.8	0.2	11.3	6.1	1.2	1	0	0	1	1	1	0	SPX	domain
DUF2552	PF10827.3	gi|15921342|ref|NP_377011.1|	-	0.17	11.8	4.5	1.7	8.6	0.1	3.4	1	1	1	3	3	2	0	Protein	of	unknown	function	(DUF2552)
DUF4559	PF15112.1	gi|15921342|ref|NP_377011.1|	-	0.17	10.9	22.8	0.58	9.2	4.3	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4559)
TEX13	PF15186.1	gi|15921342|ref|NP_377011.1|	-	0.17	11.4	24.7	0.6	9.6	4.1	3.6	1	1	3	4	4	4	0	Testis-expressed	sequence	13	protein	family
Prominin	PF05478.6	gi|15921342|ref|NP_377011.1|	-	0.18	9.3	23.1	0.86	7.0	15.4	1.9	1	1	0	1	1	1	0	Prominin
DUF2201_N	PF13203.1	gi|15921342|ref|NP_377011.1|	-	0.19	10.8	11.9	0.68	9.0	7.6	2.0	1	1	0	1	1	1	0	Putative	metallopeptidase	domain
DUF3450	PF11932.3	gi|15921342|ref|NP_377011.1|	-	0.2	10.8	35.2	1	8.5	10.9	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3450)
Vps51	PF08700.6	gi|15921342|ref|NP_377011.1|	-	0.21	11.4	18.0	6	6.7	1.9	4.4	1	1	3	4	4	4	0	Vps51/Vps67
FH2	PF02181.18	gi|15921342|ref|NP_377011.1|	-	0.22	10.3	18.5	1.2	7.9	6.0	2.3	1	1	1	2	2	2	0	Formin	Homology	2	Domain
DASH_Duo1	PF08651.5	gi|15921342|ref|NP_377011.1|	-	0.22	11.0	20.0	1.7	8.3	2.0	4.1	1	1	3	4	4	4	0	DASH	complex	subunit	Duo1
DivIVA	PF05103.8	gi|15921342|ref|NP_377011.1|	-	0.25	11.4	33.7	1.3	9.1	12.4	2.9	1	1	1	2	2	2	0	DivIVA	protein
CorA	PF01544.13	gi|15921342|ref|NP_377011.1|	-	0.29	10.1	14.7	0.3	10.0	8.7	2.1	1	1	1	2	2	1	0	CorA-like	Mg2+	transporter	protein
Seryl_tRNA_N	PF02403.17	gi|15921342|ref|NP_377011.1|	-	0.29	11.1	32.3	5.3	7.1	6.9	3.5	1	1	2	3	3	3	0	Seryl-tRNA	synthetase	N-terminal	domain
DUF1487	PF07368.6	gi|15921342|ref|NP_377011.1|	-	0.29	10.3	8.4	0.61	9.2	2.2	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1487)
Sec8_exocyst	PF04048.9	gi|15921342|ref|NP_377011.1|	-	0.29	10.7	22.8	0.5	10.0	4.3	2.4	1	1	1	2	2	2	0	Sec8	exocyst	complex	component	specific	domain
OmpH	PF03938.9	gi|15921342|ref|NP_377011.1|	-	0.29	11.0	39.2	0.63	9.9	16.2	2.5	1	1	1	2	2	2	0	Outer	membrane	protein	(OmpH-like)
TPR_6	PF13174.1	gi|15921342|ref|NP_377011.1|	-	0.3	11.6	16.5	17	6.1	0.2	6.6	1	1	4	5	5	5	0	Tetratricopeptide	repeat
Phage_GP20	PF06810.6	gi|15921342|ref|NP_377011.1|	-	0.3	10.5	30.0	3	7.2	9.6	3.5	1	1	1	2	2	2	0	Phage	minor	structural	protein	GP20
FliD_N	PF02465.13	gi|15921342|ref|NP_377011.1|	-	0.3	11.4	23.2	9.1	6.7	1.5	4.1	1	1	3	4	4	4	0	Flagellar	hook-associated	protein	2	N-terminus
Tropomyosin	PF00261.15	gi|15921342|ref|NP_377011.1|	-	0.33	10.0	28.8	0.89	8.5	7.7	2.7	1	1	2	3	3	3	0	Tropomyosin
DUF3606	PF12244.3	gi|15921342|ref|NP_377011.1|	-	0.38	10.4	3.4	14	5.4	0.6	3.4	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF3606)
PEP-utilisers_N	PF05524.8	gi|15921342|ref|NP_377011.1|	-	0.42	10.4	26.0	1.9e+03	-1.4	18.0	3.3	1	1	0	1	1	0	0	PEP-utilising	enzyme,	N-terminal
SNARE	PF05739.14	gi|15921342|ref|NP_377011.1|	-	0.44	10.2	23.1	1.7	8.3	1.4	4.2	1	1	3	4	4	3	0	SNARE	domain
HrpJ	PF07201.6	gi|15921342|ref|NP_377011.1|	-	0.46	10.4	28.1	1.8	8.5	8.9	2.4	1	1	1	2	2	2	0	HrpJ-like	domain
SpaB_C	PF14028.1	gi|15921342|ref|NP_377011.1|	-	0.48	9.9	6.4	0.87	9.0	2.5	1.9	1	1	1	2	2	2	0	SpaB	C-terminal	domain
DASH_Dam1	PF08653.5	gi|15921342|ref|NP_377011.1|	-	0.49	10.2	6.1	20	5.0	0.2	3.9	2	2	3	5	5	3	0	DASH	complex	subunit	Dam1
DUF4201	PF13870.1	gi|15921342|ref|NP_377011.1|	-	0.56	9.6	24.4	0.87	9.0	6.9	2.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4201)
DUF4140	PF13600.1	gi|15921342|ref|NP_377011.1|	-	0.59	10.6	30.4	1.4	9.3	3.7	4.3	1	1	3	4	4	4	0	N-terminal	domain	of	unknown	function	(DUF4140)
FlaC_arch	PF05377.6	gi|15921342|ref|NP_377011.1|	-	0.6	10.0	16.9	2.8	7.9	0.4	4.5	1	1	3	4	4	3	0	Flagella	accessory	protein	C	(FlaC)
DUF1019	PF06254.6	gi|15921342|ref|NP_377011.1|	-	0.64	10.2	16.8	1.5	9.0	3.2	3.5	1	1	3	4	4	4	0	Protein	of	unknown	function	(DUF1019)
Med9	PF07544.8	gi|15921342|ref|NP_377011.1|	-	0.68	9.7	32.4	2	8.2	3.3	4.0	1	1	3	4	4	4	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
TMCO5	PF14992.1	gi|15921342|ref|NP_377011.1|	-	0.7	8.9	22.0	1.2	8.1	15.3	1.5	1	0	0	1	1	1	0	TMCO5	family
DUF4618	PF15397.1	gi|15921342|ref|NP_377011.1|	-	0.71	9.1	28.9	2.6	7.3	4.4	3.8	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF4618)
FimP	PF09766.4	gi|15921342|ref|NP_377011.1|	-	0.72	8.8	28.9	0.24	10.4	1.2	3.3	2	1	2	4	4	3	0	Fms-interacting	protein
Hepatitis_core	PF00906.15	gi|15921342|ref|NP_377011.1|	-	0.72	9.4	7.4	17	4.9	3.0	3.0	1	1	1	2	2	2	0	Hepatitis	core	antigen
IL6	PF00489.12	gi|15921342|ref|NP_377011.1|	-	0.74	9.3	15.9	1.4	8.4	1.4	3.3	1	1	0	2	2	2	0	Interleukin-6/G-CSF/MGF	family
DUF885	PF05960.6	gi|15921342|ref|NP_377011.1|	-	0.74	8.8	11.7	1.1	8.2	8.1	1.3	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF885)
DUF972	PF06156.8	gi|15921342|ref|NP_377011.1|	-	0.75	10.1	23.3	30	4.9	6.0	3.5	1	1	2	3	3	2	0	Protein	of	unknown	function	(DUF972)
FliJ	PF02050.11	gi|15921342|ref|NP_377011.1|	-	0.78	9.8	42.1	0.37	10.8	7.6	3.1	2	1	1	3	3	2	0	Flagellar	FliJ	protein
Tcf25	PF04910.9	gi|15921342|ref|NP_377011.1|	-	0.84	8.5	5.8	1.3	7.8	4.0	1.4	1	0	0	1	1	1	0	Transcriptional	repressor	TCF25
Hemerythrin	PF01814.18	gi|15921342|ref|NP_377011.1|	-	0.87	9.7	8.6	2e+02	2.1	5.7	3.3	1	1	0	1	1	1	0	Hemerythrin	HHE	cation	binding	domain
Phage_lysis	PF03245.8	gi|15921342|ref|NP_377011.1|	-	0.88	9.5	24.9	6.5	6.7	4.9	4.3	1	1	3	5	5	5	0	Bacteriophage	Rz	lysis	protein
PspA_IM30	PF04012.7	gi|15921342|ref|NP_377011.1|	-	0.89	8.8	35.9	0.52	9.6	7.5	2.4	1	1	1	2	2	2	0	PspA/IM30	family
Laminin_I	PF06008.9	gi|15921342|ref|NP_377011.1|	-	0.9	8.8	31.6	4.8	6.4	9.7	2.1	1	1	0	1	1	1	0	Laminin	Domain	I
Ferritin	PF00210.19	gi|15921342|ref|NP_377011.1|	-	0.91	9.2	18.8	1.5	8.5	4.6	3.0	1	1	2	3	3	3	0	Ferritin-like	domain
Orbi_VP5	PF00901.12	gi|15921342|ref|NP_377011.1|	-	1.1	7.3	27.8	4	5.5	19.2	1.9	1	1	0	1	1	1	0	Orbivirus	outer	capsid	protein	VP5
ECM11	PF15463.1	gi|15921342|ref|NP_377011.1|	-	1.1	9.4	19.7	1.2	9.4	2.3	3.1	1	1	1	3	3	3	0	Extracellular	mutant	protein	11
Tweety	PF04906.8	gi|15921342|ref|NP_377011.1|	-	1.3	7.4	18.9	2.9	6.2	4.0	2.1	1	1	1	2	2	2	0	Tweety
CDC37_N	PF03234.9	gi|15921342|ref|NP_377011.1|	-	1.4	9.2	22.0	5.2	7.3	15.3	2.0	1	1	0	1	1	1	0	Cdc37	N	terminal	kinase	binding
Laminin_II	PF06009.7	gi|15921342|ref|NP_377011.1|	-	1.4	8.6	29.5	2.5	7.8	1.2	3.3	1	1	3	4	4	4	0	Laminin	Domain	II
DUF641	PF04859.7	gi|15921342|ref|NP_377011.1|	-	1.4	8.6	26.5	1.4	8.6	7.1	3.3	1	1	2	3	3	3	0	Plant	protein	of	unknown	function	(DUF641)
YjcZ	PF13990.1	gi|15921342|ref|NP_377011.1|	-	1.5	7.8	20.4	0.95	8.5	3.6	2.3	1	1	1	2	2	2	0	YjcZ-like	protein
RmuC	PF02646.11	gi|15921342|ref|NP_377011.1|	-	1.5	7.5	25.4	0.63	8.8	5.6	3.0	1	1	2	3	3	3	0	RmuC	family
TMF_TATA_bd	PF12325.3	gi|15921342|ref|NP_377011.1|	-	1.6	8.4	29.8	7.1	6.3	4.3	3.3	1	1	2	3	3	3	0	TATA	element	modulatory	factor	1	TATA	binding
P4Ha_N	PF08336.6	gi|15921342|ref|NP_377011.1|	-	1.6	8.5	23.0	1.9	8.2	1.8	4.2	1	1	3	4	4	4	0	Prolyl	4-Hydroxylase	alpha-subunit,	N-terminal	region
ALMT	PF11744.3	gi|15921342|ref|NP_377011.1|	-	1.6	7.2	20.2	7	5.1	7.1	2.4	1	1	1	2	2	2	0	Aluminium	activated	malate	transporter
Rootletin	PF15035.1	gi|15921342|ref|NP_377011.1|	-	1.8	8.5	25.1	16	5.4	16.0	2.6	1	1	1	2	2	2	0	Ciliary	rootlet	component,	centrosome	cohesion
YlbD_coat	PF14071.1	gi|15921342|ref|NP_377011.1|	-	1.9	8.5	22.6	4.5	7.3	2.0	3.7	1	1	3	4	4	4	0	Putative	coat	protein
KSR1-SAM	PF13543.1	gi|15921342|ref|NP_377011.1|	-	1.9	8.2	13.3	3.9	7.2	0.9	3.0	1	1	1	3	3	3	0	SAM	like	domain	present	in	kinase	suppressor	RAS	1
IBV_3A	PF03617.8	gi|15921342|ref|NP_377011.1|	-	1.9	8.2	10.1	7.1	6.4	0.4	3.6	3	0	0	3	3	3	0	IBV	3A	protein
Sec20	PF03908.8	gi|15921342|ref|NP_377011.1|	-	2	8.1	20.1	1.9	8.2	1.1	3.8	1	1	4	5	5	5	0	Sec20
Methyltransf_31	PF13847.1	gi|15921342|ref|NP_377011.1|	-	2.1	7.9	8.7	1.3	8.5	3.6	2.5	2	1	0	2	2	1	0	Methyltransferase	domain
Sas10_Utp3	PF04000.10	gi|15921342|ref|NP_377011.1|	-	2.1	8.5	18.3	13	6.0	2.0	4.6	1	1	1	2	2	1	0	Sas10/Utp3/C1D	family
COG2	PF06148.6	gi|15921342|ref|NP_377011.1|	-	2.2	8.1	23.7	3.3	7.5	5.0	3.5	1	1	2	3	3	3	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
CALCOCO1	PF07888.6	gi|15921342|ref|NP_377011.1|	-	2.2	6.4	23.0	3.6	5.7	15.9	1.3	1	0	0	1	1	1	0	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
Phage_Gp23	PF10669.4	gi|15921342|ref|NP_377011.1|	-	2.2	8.3	16.5	8.5	6.5	5.1	3.3	1	1	2	3	3	3	0	Protein	gp23	(Bacteriophage	A118)
IKKbetaNEMObind	PF12179.3	gi|15921342|ref|NP_377011.1|	-	2.4	8.0	10.7	11	5.9	0.1	5.1	4	3	2	6	6	4	0	I-kappa-kinase-beta	NEMO	binding	domain
Syntaxin-6_N	PF09177.6	gi|15921342|ref|NP_377011.1|	-	2.6	8.5	21.4	13	6.2	5.9	3.1	1	1	2	3	3	3	0	Syntaxin	6,	N-terminal
Syntaxin	PF00804.20	gi|15921342|ref|NP_377011.1|	-	3.2	7.9	31.5	37	4.5	6.4	3.0	1	1	1	2	2	2	0	Syntaxin
Dna2	PF08696.6	gi|15921342|ref|NP_377011.1|	-	3.7	6.7	16.3	6.6	5.9	4.0	3.1	1	1	2	3	3	3	0	DNA	replication	factor	Dna2
FTCD_C	PF04961.7	gi|15921342|ref|NP_377011.1|	-	3.8	6.8	17.3	5.9	6.2	3.6	2.3	1	1	1	2	2	2	0	Formiminotransferase-cyclodeaminase
V_ATPase_I	PF01496.14	gi|15921342|ref|NP_377011.1|	-	4	5.1	22.7	42	1.7	15.6	2.0	1	1	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
APG6	PF04111.7	gi|15921342|ref|NP_377011.1|	-	4.8	6.1	29.4	3.7	6.4	7.8	2.1	1	1	1	2	2	2	0	Autophagy	protein	Apg6
LOH1CR12	PF10158.4	gi|15921342|ref|NP_377011.1|	-	5	6.9	16.4	1.2	8.9	4.3	2.5	1	1	1	2	2	2	0	Tumour	suppressor	protein
TcdA_TcdB	PF12919.2	gi|15921342|ref|NP_377011.1|	-	5.3	5.3	16.8	6.2	5.1	3.7	2.5	1	1	1	2	2	2	0	TcdA/TcdB	catalytic	glycosyltransferase	domain
Cauli_AT	PF03233.8	gi|15921342|ref|NP_377011.1|	-	6.5	6.4	23.0	3.9	7.1	4.5	3.4	1	1	2	3	3	3	0	Aphid	transmission	protein
Nsp1_C	PF05064.8	gi|15921342|ref|NP_377011.1|	-	6.8	6.3	22.9	1.7	8.2	1.3	3.2	1	1	2	3	3	3	0	Nsp1-like	C-terminal	region
NAAA-beta	PF15508.1	gi|15921342|ref|NP_377011.1|	-	6.8	7.1	8.3	22	5.4	0.8	3.6	2	1	3	5	5	3	0	beta	subunit	of	N-acylethanolamine-hydrolyzing	acid	amidase
HAUS-augmin3	PF14932.1	gi|15921342|ref|NP_377011.1|	-	7.2	5.7	31.2	3.2	6.8	14.5	2.2	1	1	1	2	2	2	0	HAUS	augmin-like	complex	subunit	3
Jacalin	PF01419.12	gi|15921342|ref|NP_377011.1|	-	7.4	6.4	10.2	24	4.8	0.7	3.6	2	1	2	4	4	4	0	Jacalin-like	lectin	domain
TMPIT	PF07851.8	gi|15921342|ref|NP_377011.1|	-	8	5.4	24.3	8.1	5.4	6.4	2.2	1	1	1	2	2	2	0	TMPIT-like	protein
TPR_2	PF07719.12	gi|15921342|ref|NP_377011.1|	-	8.4	6.5	20.9	33	4.7	0.1	6.7	5	2	2	7	7	5	0	Tetratricopeptide	repeat
Peptidase_S46	PF10459.4	gi|15921342|ref|NP_377011.1|	-	8.5	4.6	21.0	1.5	7.1	4.0	1.8	1	1	1	2	2	2	0	Peptidase	S46
Prefoldin_2	PF01920.15	gi|15921342|ref|NP_377011.1|	-	8.6	6.1	34.5	3.8	7.3	5.9	4.3	1	1	2	3	3	3	0	Prefoldin	subunit
DUF2400	PF09674.5	gi|15921342|ref|NP_377011.1|	-	9	5.9	12.6	16	5.0	1.9	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2400)
Cytochrom_C_2	PF01322.15	gi|15921342|ref|NP_377011.1|	-	9.2	6.8	15.3	19	5.8	3.7	2.7	1	1	1	2	2	2	0	Cytochrome	C'
DUF4094	PF13334.1	gi|15921342|ref|NP_377011.1|	-	9.4	6.7	25.6	10	6.5	2.0	4.6	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF4094)
PaREP1	PF05942.6	gi|15921343|ref|NP_377012.1|	-	7.7e-29	99.8	0.5	9.3e-29	99.6	0.3	1.1	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
2C_adapt	PF08793.5	gi|15921345|ref|NP_377014.1|	-	0.069	13.0	2.0	0.11	12.3	0.1	2.1	2	0	0	2	2	2	0	2-cysteine	adaptor	domain
OrfB_Zn_ribbon	PF07282.6	gi|15921345|ref|NP_377014.1|	-	0.096	12.3	0.0	0.85	9.3	0.0	2.5	3	0	0	3	3	3	0	Putative	transposase	DNA-binding	domain
SpoVIF	PF14069.1	gi|15921345|ref|NP_377014.1|	-	0.34	10.6	4.3	2.3	8.0	0.4	2.9	2	1	1	3	3	3	0	Stage	VI	sporulation	protein	F
Resolvase	PF00239.16	gi|15921346|ref|NP_377015.1|	-	1.4e-21	76.8	0.5	1.9e-21	76.4	0.3	1.1	1	0	0	1	1	1	1	Resolvase,	N	terminal	domain
HTH_17	PF12728.2	gi|15921346|ref|NP_377015.1|	-	6.2e-14	51.9	1.5	3.5e-13	49.5	0.1	2.7	3	0	0	3	3	3	1	Helix-turn-helix	domain
DUF1323	PF07037.6	gi|15921346|ref|NP_377015.1|	-	0.00086	19.4	0.1	0.0025	17.9	0.1	1.9	1	1	0	1	1	1	1	Putative	transcription	regulator	(DUF1323)
MerR_1	PF13411.1	gi|15921346|ref|NP_377015.1|	-	0.0021	17.8	0.1	0.0063	16.2	0.0	1.9	2	0	0	2	2	2	1	MerR	HTH	family	regulatory	protein
MerR	PF00376.18	gi|15921346|ref|NP_377015.1|	-	0.0022	17.4	0.0	0.0054	16.2	0.0	1.7	1	0	0	1	1	1	1	MerR	family	regulatory	protein
cwf21	PF08312.7	gi|15921346|ref|NP_377015.1|	-	0.0036	17.1	0.4	0.89	9.4	0.0	2.5	2	0	0	2	2	2	1	cwf21	domain
TFIID_20kDa	PF03847.8	gi|15921346|ref|NP_377015.1|	-	0.015	15.6	0.0	0.049	13.9	0.0	1.9	2	0	0	2	2	2	0	Transcription	initiation	factor	TFIID	subunit	A
HTH_28	PF13518.1	gi|15921346|ref|NP_377015.1|	-	0.026	14.5	2.5	0.083	12.9	0.1	2.8	3	0	0	3	3	3	0	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|15921346|ref|NP_377015.1|	-	0.026	14.1	0.1	0.18	11.4	0.0	2.3	2	0	0	2	2	2	0	Homeodomain-like	domain
ApoO	PF09769.4	gi|15921346|ref|NP_377015.1|	-	0.063	12.9	0.0	0.35	10.5	0.0	1.9	2	0	0	2	2	2	0	Apolipoprotein	O
Clp1	PF06807.9	gi|15921346|ref|NP_377015.1|	-	0.064	13.0	0.2	0.54	9.9	0.0	2.3	1	1	2	3	3	3	0	Pre-mRNA	cleavage	complex	II	protein	Clp1
HTH_3	PF01381.17	gi|15921346|ref|NP_377015.1|	-	0.098	12.5	0.0	0.53	10.1	0.0	2.2	2	0	0	2	2	2	0	Helix-turn-helix
HTH_37	PF13744.1	gi|15921346|ref|NP_377015.1|	-	0.11	12.3	0.0	1.4	8.7	0.0	2.4	2	0	0	2	2	2	0	Helix-turn-helix	domain
PaREP1	PF05942.6	gi|15921347|ref|NP_377016.1|	-	9.5e-24	83.4	3.3	1.4e-23	82.9	2.3	1.3	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
HEPN	PF05168.9	gi|15921347|ref|NP_377016.1|	-	2.5e-06	27.3	2.3	4.9e-06	26.4	1.6	1.4	1	0	0	1	1	1	1	HEPN	domain
HhH-GPD	PF00730.20	gi|15921348|ref|NP_377017.1|	-	4.6e-13	49.4	0.0	8e-13	48.6	0.0	1.3	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
OGG_N	PF07934.7	gi|15921348|ref|NP_377017.1|	-	6.9e-05	22.8	0.0	0.00013	21.8	0.0	1.4	1	0	0	1	1	1	1	8-oxoguanine	DNA	glycosylase,	N-terminal	domain
AlkA_N	PF06029.6	gi|15921348|ref|NP_377017.1|	-	0.15	12.0	0.0	0.24	11.4	0.0	1.3	1	0	0	1	1	1	0	AlkA	N-terminal	domain
Oxidored_molyb	PF00174.14	gi|15921349|ref|NP_377018.1|	-	2e-39	134.7	0.0	2.2e-39	134.5	0.0	1.0	1	0	0	1	1	1	1	Oxidoreductase	molybdopterin	binding	domain
Y1_Tnp	PF01797.11	gi|15921350|ref|NP_377019.1|	-	5.7e-44	148.8	0.0	6.5e-44	148.6	0.0	1.0	1	0	0	1	1	1	1	Transposase	IS200	like
OrfB_IS605	PF01385.14	gi|15921351|ref|NP_377020.1|	-	2.8e-12	46.5	0.5	4.4e-12	45.8	0.4	1.3	1	0	0	1	1	1	1	Probable	transposase
OrfB_IS605	PF01385.14	gi|15921352|ref|NP_377021.1|	-	4.7e-57	193.0	6.9	6.1e-57	192.6	4.8	1.1	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.6	gi|15921352|ref|NP_377021.1|	-	3.7e-19	68.1	0.0	7.2e-19	67.2	0.0	1.5	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
UPF0081	PF03652.10	gi|15921352|ref|NP_377021.1|	-	3.4e-06	27.2	0.0	5.7e-06	26.4	0.0	1.3	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0081)
DUF1854	PF08909.6	gi|15921353|ref|NP_377022.1|	-	3e-47	159.5	0.3	3.5e-46	156.0	0.1	2.5	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1854)
ABC_membrane	PF00664.18	gi|15921353|ref|NP_377022.1|	-	5.8e-41	140.7	11.6	9.3e-41	140.0	8.0	1.3	1	0	0	1	1	1	1	ABC	transporter	transmembrane	region
ABC_tran	PF00005.22	gi|15921353|ref|NP_377022.1|	-	1.5e-36	125.6	0.0	8e-36	123.3	0.0	2.2	2	0	0	2	2	2	1	ABC	transporter
AAA_17	PF13207.1	gi|15921353|ref|NP_377022.1|	-	1.4e-05	25.8	0.0	5.8e-05	23.8	0.0	2.2	1	0	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|15921353|ref|NP_377022.1|	-	2.6e-05	23.5	1.8	0.0059	15.8	0.0	2.6	1	1	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
ABC_membrane_3	PF13748.1	gi|15921353|ref|NP_377022.1|	-	4.9e-05	22.4	6.9	5.7e-05	22.2	2.7	2.3	2	1	0	2	2	2	1	ABC	transporter	transmembrane	region
AAA_10	PF12846.2	gi|15921353|ref|NP_377022.1|	-	0.00048	19.6	0.1	0.045	13.1	0.0	3.3	4	0	0	4	4	4	1	AAA-like	domain
AAA_29	PF13555.1	gi|15921353|ref|NP_377022.1|	-	0.0012	18.3	0.2	0.0029	17.0	0.1	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
DUF87	PF01935.12	gi|15921353|ref|NP_377022.1|	-	0.0015	18.3	0.1	0.008	16.0	0.0	2.2	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF87
AAA_5	PF07728.9	gi|15921353|ref|NP_377022.1|	-	0.0017	18.0	0.0	0.31	10.7	0.0	3.1	3	0	0	3	3	3	1	AAA	domain	(dynein-related	subfamily)
AAA_22	PF13401.1	gi|15921353|ref|NP_377022.1|	-	0.0018	18.4	0.3	0.07	13.2	0.1	3.3	2	1	0	2	2	2	1	AAA	domain
ATP-synt_ab	PF00006.20	gi|15921353|ref|NP_377022.1|	-	0.0025	17.3	0.1	1.4	8.3	0.0	2.3	2	0	0	2	2	2	2	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_18	PF13238.1	gi|15921353|ref|NP_377022.1|	-	0.0061	16.8	0.4	0.0061	16.8	0.3	3.2	4	2	1	5	5	3	1	AAA	domain
MMR_HSR1	PF01926.18	gi|15921353|ref|NP_377022.1|	-	0.012	15.5	0.3	0.21	11.5	0.0	3.0	4	0	0	4	4	3	0	50S	ribosome-binding	GTPase
CbiA	PF01656.18	gi|15921353|ref|NP_377022.1|	-	0.033	13.5	0.1	0.076	12.4	0.0	1.7	1	0	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
MobB	PF03205.9	gi|15921353|ref|NP_377022.1|	-	0.035	13.8	0.1	0.12	12.0	0.1	2.0	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
DUF258	PF03193.11	gi|15921353|ref|NP_377022.1|	-	0.047	12.8	0.0	0.094	11.9	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_16	PF13191.1	gi|15921353|ref|NP_377022.1|	-	0.049	13.6	0.3	0.28	11.1	0.1	2.3	2	1	0	2	2	2	0	AAA	ATPase	domain
FtsK_SpoIIIE	PF01580.13	gi|15921353|ref|NP_377022.1|	-	0.056	12.9	0.0	0.12	11.8	0.0	1.4	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
AAA_33	PF13671.1	gi|15921353|ref|NP_377022.1|	-	0.11	12.4	0.1	0.44	10.4	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
AAA_23	PF13476.1	gi|15921353|ref|NP_377022.1|	-	0.12	12.6	0.1	0.12	12.6	0.1	3.4	3	0	0	3	3	3	0	AAA	domain
AAA_25	PF13481.1	gi|15921353|ref|NP_377022.1|	-	0.15	11.4	0.1	0.84	8.9	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
NTP_transf_2	PF01909.18	gi|15921354|ref|NP_377023.1|	-	4.2e-12	46.2	0.5	5.1e-12	45.9	0.3	1.2	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
DUF294	PF03445.8	gi|15921354|ref|NP_377023.1|	-	0.034	13.7	0.0	0.039	13.5	0.0	1.1	1	0	0	1	1	1	0	Putative	nucleotidyltransferase	DUF294
GidB	PF02527.10	gi|15921354|ref|NP_377023.1|	-	0.071	12.2	0.1	0.074	12.1	0.1	1.3	1	1	0	1	1	1	0	rRNA	small	subunit	methyltransferase	G
Antitoxin-MazE	PF04014.13	gi|15921355|ref|NP_377024.1|	-	1.9e-12	46.5	0.4	3.7e-12	45.6	0.2	1.6	1	1	0	1	1	1	1	Antidote-toxin	recognition	MazE
AbrB-like	PF14250.1	gi|15921355|ref|NP_377024.1|	-	0.11	12.3	0.1	0.22	11.4	0.0	1.5	2	0	0	2	2	2	0	AbrB-like	transcriptional	regulator
PIN	PF01850.16	gi|15921356|ref|NP_377025.1|	-	3.7e-14	53.1	0.0	4.1e-14	52.9	0.0	1.0	1	0	0	1	1	1	1	PIN	domain
DUF4411	PF14367.1	gi|15921356|ref|NP_377025.1|	-	0.022	14.4	0.0	0.025	14.2	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4411)
Glyco_hydro_57	PF03065.10	gi|15921357|ref|NP_377026.1|	-	1.2e-48	165.8	1.7	2.8e-48	164.6	1.2	1.6	1	0	0	1	1	1	1	Glycosyl	hydrolase	family	57
SBP_bac_8	PF13416.1	gi|15921358|ref|NP_377027.1|	-	6.2e-21	75.3	13.5	7.4e-21	75.1	8.6	1.6	1	1	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
BPD_transp_1	PF00528.17	gi|15921359|ref|NP_377028.1|	-	3.2e-16	59.4	17.4	3.6e-16	59.2	12.1	1.1	1	0	0	1	1	1	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.17	gi|15921360|ref|NP_377029.1|	-	4.4e-13	49.1	24.7	4.4e-13	49.1	17.1	2.1	1	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
ABC_tran	PF00005.22	gi|15921361|ref|NP_377030.1|	-	2.3e-32	112.1	0.0	3.9e-32	111.4	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
TOBE_2	PF08402.5	gi|15921361|ref|NP_377030.1|	-	4.3e-11	42.6	0.0	9.4e-11	41.5	0.0	1.6	1	0	0	1	1	1	1	TOBE	domain
AAA_21	PF13304.1	gi|15921361|ref|NP_377030.1|	-	8.2e-09	35.8	0.3	0.00065	19.7	0.0	2.6	2	1	0	3	3	3	2	AAA	domain
AAA_15	PF13175.1	gi|15921361|ref|NP_377030.1|	-	4.9e-08	32.4	0.3	0.00032	19.8	0.0	2.5	2	1	1	3	3	3	2	AAA	ATPase	domain
TOBE	PF03459.12	gi|15921361|ref|NP_377030.1|	-	7e-08	32.4	0.0	0.00086	19.3	0.0	3.4	2	1	0	2	2	2	2	TOBE	domain
AAA_19	PF13245.1	gi|15921361|ref|NP_377030.1|	-	0.00015	21.4	0.0	0.00033	20.3	0.0	1.5	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_16	PF13191.1	gi|15921361|ref|NP_377030.1|	-	0.0003	20.8	0.0	0.00059	19.8	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
SMC_N	PF02463.14	gi|15921361|ref|NP_377030.1|	-	0.00095	18.4	0.6	0.021	14.0	0.4	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|15921361|ref|NP_377030.1|	-	0.0015	18.8	1.9	0.0023	18.2	0.0	2.1	3	0	0	3	3	3	1	AAA	domain
DUF258	PF03193.11	gi|15921361|ref|NP_377030.1|	-	0.0053	15.9	0.0	0.011	14.8	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
Arch_ATPase	PF01637.13	gi|15921361|ref|NP_377030.1|	-	0.0084	15.8	0.1	0.02	14.5	0.1	1.6	1	0	0	1	1	1	1	Archaeal	ATPase
AAA_29	PF13555.1	gi|15921361|ref|NP_377030.1|	-	0.011	15.2	0.0	0.029	13.8	0.0	1.7	2	0	0	2	2	1	0	P-loop	containing	region	of	AAA	domain
AAA_30	PF13604.1	gi|15921361|ref|NP_377030.1|	-	0.015	14.9	0.0	0.028	13.9	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_17	PF13207.1	gi|15921361|ref|NP_377030.1|	-	0.019	15.7	1.1	0.083	13.7	0.7	2.4	1	1	0	1	1	1	0	AAA	domain
NACHT	PF05729.7	gi|15921361|ref|NP_377030.1|	-	0.021	14.4	0.0	0.039	13.5	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
NTPase_1	PF03266.10	gi|15921361|ref|NP_377030.1|	-	0.029	14.0	0.2	0.4	10.3	0.0	2.3	2	0	0	2	2	2	0	NTPase
T2SE	PF00437.15	gi|15921361|ref|NP_377030.1|	-	0.043	12.7	0.0	0.079	11.8	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_22	PF13401.1	gi|15921361|ref|NP_377030.1|	-	0.05	13.7	0.1	0.13	12.3	0.1	1.8	1	1	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.17	gi|15921361|ref|NP_377030.1|	-	0.063	13.4	0.0	0.24	11.5	0.0	2.0	2	0	0	2	2	2	0	RNA	helicase
AAA_25	PF13481.1	gi|15921361|ref|NP_377030.1|	-	0.076	12.4	0.0	0.16	11.3	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_18	PF13238.1	gi|15921361|ref|NP_377030.1|	-	0.16	12.2	1.3	0.37	11.1	0.1	2.3	2	1	0	2	2	2	0	AAA	domain
Glyco_hydro_15	PF00723.16	gi|15921362|ref|NP_377031.1|	-	3e-07	29.3	1.2	2.9e-05	22.8	0.7	2.3	1	1	0	1	1	1	1	Glycosyl	hydrolases	family	15
NapE	PF06796.6	gi|15921362|ref|NP_377031.1|	-	0.073	12.3	0.8	4.5	6.6	0.1	2.5	2	0	0	2	2	2	0	Periplasmic	nitrate	reductase	protein	NapE
MR_MLE_C	PF13378.1	gi|15921363|ref|NP_377032.1|	-	2.3e-27	95.1	0.0	8.8e-26	90.0	0.0	2.2	2	0	0	2	2	2	1	Enolase	C-terminal	domain-like
MR_MLE_N	PF02746.11	gi|15921363|ref|NP_377032.1|	-	3.6e-21	75.3	0.1	9.2e-21	74.0	0.0	1.7	2	0	0	2	2	2	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	N-terminal	domain
MR_MLE	PF01188.16	gi|15921363|ref|NP_377032.1|	-	8.8e-16	58.2	0.0	3.6e-15	56.2	0.0	1.9	2	0	0	2	2	2	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
Pterin_bind	PF00809.17	gi|15921363|ref|NP_377032.1|	-	0.017	14.4	0.0	0.071	12.4	0.0	1.9	2	0	0	2	2	2	0	Pterin	binding	enzyme
XH	PF03469.9	gi|15921363|ref|NP_377032.1|	-	0.11	12.1	0.8	0.3	10.7	0.4	1.9	1	1	1	2	2	2	0	XH	domain
adh_short	PF00106.20	gi|15921364|ref|NP_377033.1|	-	2.2e-31	109.0	0.0	3.2e-31	108.5	0.0	1.2	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|15921364|ref|NP_377033.1|	-	1e-30	107.2	0.0	1.2e-30	107.0	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|15921364|ref|NP_377033.1|	-	3.5e-11	43.1	0.0	5e-11	42.6	0.0	1.2	1	0	0	1	1	1	1	KR	domain
THF_DHG_CYH_C	PF02882.14	gi|15921364|ref|NP_377033.1|	-	0.021	13.9	0.1	0.081	11.9	0.0	2.0	1	1	0	1	1	1	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
NAD_binding_10	PF13460.1	gi|15921364|ref|NP_377033.1|	-	0.03	14.3	0.4	0.39	10.6	0.3	2.1	1	1	0	1	1	1	0	NADH(P)-binding
Eno-Rase_NADH_b	PF12242.3	gi|15921364|ref|NP_377033.1|	-	0.034	13.9	1.0	0.074	12.8	0.7	1.5	1	0	0	1	1	1	0	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
Epimerase	PF01370.16	gi|15921364|ref|NP_377033.1|	-	0.089	12.2	0.2	0.23	10.8	0.1	1.7	1	1	0	1	1	1	0	NAD	dependent	epimerase/dehydratase	family
Thiolase_C	PF02803.13	gi|15921365|ref|NP_377034.1|	-	0.00065	19.1	0.2	0.0021	17.4	0.0	1.9	2	0	0	2	2	2	1	Thiolase,	C-terminal	domain
DUF35	PF01796.12	gi|15921366|ref|NP_377035.1|	-	3e-09	36.9	0.0	4.4e-09	36.4	0.0	1.2	1	0	0	1	1	1	1	DUF35	OB-fold	domain
DUF35_N	PF12172.3	gi|15921366|ref|NP_377035.1|	-	2.8e-07	30.2	0.6	4.1e-07	29.7	0.4	1.2	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
HypA	PF01155.14	gi|15921366|ref|NP_377035.1|	-	0.00058	19.5	0.1	0.0011	18.6	0.1	1.4	1	0	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
DZR	PF12773.2	gi|15921366|ref|NP_377035.1|	-	0.011	15.5	1.6	0.019	14.7	1.1	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
NOB1_Zn_bind	PF08772.6	gi|15921366|ref|NP_377035.1|	-	0.013	15.2	2.6	0.02	14.7	0.6	1.9	2	0	0	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
FYVE	PF01363.16	gi|15921366|ref|NP_377035.1|	-	0.014	15.3	0.1	0.015	15.2	0.1	1.3	1	0	0	1	1	1	0	FYVE	zinc	finger
Lar_restr_allev	PF14354.1	gi|15921366|ref|NP_377035.1|	-	0.025	14.8	2.3	0.95	9.8	0.1	2.4	1	1	1	2	2	2	0	Restriction	alleviation	protein	Lar
zf-NADH-PPase	PF09297.6	gi|15921366|ref|NP_377035.1|	-	0.026	14.0	1.0	0.22	11.0	0.0	2.3	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
C6_DPF	PF10170.4	gi|15921366|ref|NP_377035.1|	-	0.026	14.5	0.6	0.059	13.4	0.3	1.7	2	0	0	2	2	2	0	Cysteine-rich	domain
TRAM	PF01938.15	gi|15921366|ref|NP_377035.1|	-	0.027	14.2	0.8	0.039	13.7	0.5	1.4	1	1	0	1	1	1	0	TRAM	domain
TFIIS_C	PF01096.13	gi|15921366|ref|NP_377035.1|	-	0.048	13.2	2.1	2.2	8.0	0.1	2.3	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
NRDD	PF13597.1	gi|15921366|ref|NP_377035.1|	-	0.061	11.3	0.1	0.081	10.9	0.1	1.1	1	0	0	1	1	1	0	Anaerobic	ribonucleoside-triphosphate	reductase
S1	PF00575.18	gi|15921366|ref|NP_377035.1|	-	0.07	13.2	2.1	0.14	12.3	1.5	1.7	1	1	0	1	1	1	0	S1	RNA	binding	domain
DUF1936	PF09151.5	gi|15921366|ref|NP_377035.1|	-	0.071	12.6	1.0	0.15	11.5	0.1	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1936)
DUF2082	PF09855.4	gi|15921366|ref|NP_377035.1|	-	0.072	12.9	9.9	0.64	9.8	1.4	2.8	2	1	1	3	3	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
zinc_ribbon_5	PF13719.1	gi|15921366|ref|NP_377035.1|	-	0.16	11.5	1.1	3.7	7.2	0.0	2.6	2	0	0	2	2	2	0	zinc-ribbon	domain
PhnA_Zn_Ribbon	PF08274.7	gi|15921366|ref|NP_377035.1|	-	0.19	11.5	1.6	13	5.6	0.1	2.2	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
A2L_zn_ribbon	PF08792.5	gi|15921366|ref|NP_377035.1|	-	0.21	11.0	3.1	7.5	6.1	0.1	2.8	3	0	0	3	3	2	0	A2L	zinc	ribbon	domain
RNA_POL_M_15KD	PF02150.11	gi|15921366|ref|NP_377035.1|	-	0.61	9.8	4.2	2.9	7.6	0.6	2.3	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
zf-H2C2_2	PF13465.1	gi|15921366|ref|NP_377035.1|	-	1.3	9.4	5.8	4.2	7.8	0.6	2.5	2	0	0	2	2	2	0	Zinc-finger	double	domain
zf-ribbon_3	PF13248.1	gi|15921366|ref|NP_377035.1|	-	1.3	8.2	6.4	8	5.8	4.6	2.0	1	1	0	1	1	1	0	zinc-ribbon	domain
Zn-ribbon_8	PF09723.5	gi|15921366|ref|NP_377035.1|	-	3	7.8	6.4	68	3.5	3.5	2.6	2	1	1	3	3	3	0	Zinc	ribbon	domain
AMP-binding	PF00501.23	gi|15921367|ref|NP_377036.1|	-	2.3e-83	279.9	0.0	2.9e-83	279.5	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|15921367|ref|NP_377036.1|	-	2.7e-19	69.8	0.2	4.9e-19	69.0	0.1	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
Peptidase_M20	PF01546.23	gi|15921368|ref|NP_377037.1|	-	2.7e-28	98.7	0.0	3.7e-28	98.3	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|15921368|ref|NP_377037.1|	-	9.6e-19	67.1	0.0	1.9e-18	66.2	0.0	1.5	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Aminotran_3	PF00202.16	gi|15921369|ref|NP_377038.1|	-	1.8e-85	286.7	0.0	2.2e-85	286.5	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
HTH_24	PF13412.1	gi|15921370|ref|NP_377039.1|	-	2.7e-14	52.2	1.6	4e-14	51.7	1.1	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|15921370|ref|NP_377039.1|	-	2.6e-13	49.2	0.1	4.1e-13	48.6	0.1	1.3	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
AsnC_trans_reg	PF01037.16	gi|15921370|ref|NP_377039.1|	-	2e-12	46.6	0.0	2.7e-12	46.1	0.0	1.3	1	0	0	1	1	1	1	AsnC	family
HTH_20	PF12840.2	gi|15921370|ref|NP_377039.1|	-	5.8e-06	26.0	0.0	8.7e-06	25.4	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|15921370|ref|NP_377039.1|	-	5.3e-05	22.8	0.1	8e-05	22.2	0.1	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
MarR_2	PF12802.2	gi|15921370|ref|NP_377039.1|	-	0.00091	18.8	0.0	0.0014	18.2	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_11	PF08279.7	gi|15921370|ref|NP_377039.1|	-	0.0023	17.5	0.2	0.0044	16.6	0.2	1.4	1	0	0	1	1	1	1	HTH	domain
DDRGK	PF09756.4	gi|15921370|ref|NP_377039.1|	-	0.0057	16.0	0.1	0.0088	15.4	0.1	1.2	1	0	0	1	1	1	1	DDRGK	domain
MarR	PF01047.17	gi|15921370|ref|NP_377039.1|	-	0.0095	15.6	0.8	0.032	13.9	0.1	2.1	3	0	0	3	3	3	1	MarR	family
HTH_IclR	PF09339.5	gi|15921370|ref|NP_377039.1|	-	0.011	15.3	0.0	0.021	14.3	0.0	1.4	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
Mga	PF05043.8	gi|15921370|ref|NP_377039.1|	-	0.019	15.2	0.1	0.04	14.2	0.1	1.6	1	0	0	1	1	1	0	Mga	helix-turn-helix	domain
TFIIE_alpha	PF02002.12	gi|15921370|ref|NP_377039.1|	-	0.031	13.7	0.6	0.09	12.2	0.2	1.8	2	0	0	2	2	2	0	TFIIE	alpha	subunit
HTH_WhiA	PF02650.9	gi|15921370|ref|NP_377039.1|	-	0.043	14.2	0.2	0.087	13.2	0.1	1.5	1	0	0	1	1	1	0	WhiA	C-terminal	HTH	domain
HTH_30	PF13556.1	gi|15921370|ref|NP_377039.1|	-	0.047	13.2	0.0	0.086	12.4	0.0	1.3	1	0	0	1	1	1	0	PucR	C-terminal	helix-turn-helix	domain
FeoC	PF09012.5	gi|15921370|ref|NP_377039.1|	-	0.054	13.2	0.0	0.15	11.7	0.0	1.7	2	0	0	2	2	2	0	FeoC	like	transcriptional	regulator
DUF1759	PF03564.10	gi|15921370|ref|NP_377039.1|	-	0.083	12.6	0.3	0.25	11.1	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1759)
B-block_TFIIIC	PF04182.7	gi|15921370|ref|NP_377039.1|	-	0.11	12.3	0.0	0.22	11.3	0.0	1.6	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
HTH_23	PF13384.1	gi|15921370|ref|NP_377039.1|	-	0.11	12.1	0.0	0.21	11.3	0.0	1.4	1	0	0	1	1	1	0	Homeodomain-like	domain
Aldedh	PF00171.17	gi|15921371|ref|NP_377040.1|	-	3.3e-142	474.0	0.0	4e-142	473.8	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
LuxC	PF05893.9	gi|15921371|ref|NP_377040.1|	-	0.019	13.7	0.0	0.025	13.3	0.0	1.2	1	0	0	1	1	1	0	Acyl-CoA	reductase	(LuxC)
Enkurin	PF13864.1	gi|15921371|ref|NP_377040.1|	-	0.07	13.3	0.9	0.24	11.6	0.2	2.1	2	0	0	2	2	2	0	Calmodulin-binding
Syntaxin-6_N	PF09177.6	gi|15921371|ref|NP_377040.1|	-	0.1	12.9	1.1	0.44	10.9	0.4	2.2	2	1	0	2	2	2	0	Syntaxin	6,	N-terminal
UPF0150	PF03681.10	gi|15921371|ref|NP_377040.1|	-	0.16	11.6	0.8	58	3.4	0.1	3.6	4	0	0	4	4	4	0	Uncharacterised	protein	family	(UPF0150)
Transp_cyt_pur	PF02133.10	gi|15921372|ref|NP_377041.1|	-	1e-64	218.7	49.4	1.3e-64	218.4	34.2	1.1	1	0	0	1	1	1	1	Permease	for	cytosine/purines,	uracil,	thiamine,	allantoin
Amidohydro_4	PF13147.1	gi|15921373|ref|NP_377042.1|	-	4e-21	76.2	0.0	4.5e-20	72.8	0.0	2.0	1	1	0	1	1	1	1	Amidohydrolase
Amidohydro_1	PF01979.15	gi|15921373|ref|NP_377042.1|	-	1.7e-19	70.7	0.0	6.8e-19	68.6	0.0	1.8	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|15921373|ref|NP_377042.1|	-	1.8e-18	66.1	1.1	5.6e-18	64.5	0.8	1.9	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|15921373|ref|NP_377042.1|	-	3.4e-06	26.5	0.0	0.0046	16.2	0.0	2.5	2	1	0	2	2	2	2	Amidohydrolase	family
Urease_alpha	PF00449.15	gi|15921373|ref|NP_377042.1|	-	0.011	15.8	0.4	0.035	14.2	0.3	1.9	1	0	0	1	1	1	0	Urease	alpha-subunit,	N-terminal	domain
DHO_dh	PF01180.16	gi|15921375|ref|NP_377044.1|	-	1.1e-36	126.3	0.0	1.3e-36	126.0	0.0	1.1	1	0	0	1	1	1	1	Dihydroorotate	dehydrogenase
Dus	PF01207.12	gi|15921375|ref|NP_377044.1|	-	1.4e-12	47.0	0.0	5.2e-12	45.2	0.0	1.8	2	0	0	2	2	2	1	Dihydrouridine	synthase	(Dus)
Phi-29_GP3	PF05435.6	gi|15921375|ref|NP_377044.1|	-	0.021	14.0	0.2	0.033	13.3	0.1	1.2	1	0	0	1	1	1	0	Phi-29	DNA	terminal	protein	GP3
CN_hydrolase	PF00795.17	gi|15921376|ref|NP_377045.1|	-	6.7e-32	110.3	0.0	8.8e-32	109.9	0.0	1.1	1	0	0	1	1	1	1	Carbon-nitrogen	hydrolase
Transposase_20	PF02371.11	gi|15921377|ref|NP_377046.1|	-	2.2e-27	94.9	0.0	4.2e-27	94.0	0.0	1.5	1	0	0	1	1	1	1	Transposase	IS116/IS110/IS902	family
DEDD_Tnp_IS110	PF01548.12	gi|15921377|ref|NP_377046.1|	-	5.8e-19	68.1	0.0	1.3e-18	67.0	0.0	1.5	1	1	0	1	1	1	1	Transposase
PCMT	PF01135.14	gi|15921379|ref|NP_377048.1|	-	1.3e-38	132.7	0.0	1.5e-38	132.4	0.0	1.0	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
RrnaAD	PF00398.15	gi|15921379|ref|NP_377048.1|	-	1.1e-09	37.6	0.0	1.8e-09	37.0	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_18	PF12847.2	gi|15921379|ref|NP_377048.1|	-	5.1e-08	33.4	0.0	8.4e-08	32.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|15921379|ref|NP_377048.1|	-	9e-07	28.5	0.0	1.4e-06	27.9	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Met_10	PF02475.11	gi|15921379|ref|NP_377048.1|	-	9.3e-05	22.1	0.0	0.00018	21.1	0.0	1.5	2	0	0	2	2	2	1	Met-10+	like-protein
CMAS	PF02353.15	gi|15921379|ref|NP_377048.1|	-	0.00029	20.0	0.0	0.00053	19.1	0.0	1.5	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_23	PF13489.1	gi|15921379|ref|NP_377048.1|	-	0.0004	20.1	0.0	0.00061	19.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|15921379|ref|NP_377048.1|	-	0.00083	18.7	0.0	0.0013	18.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_26	PF13659.1	gi|15921379|ref|NP_377048.1|	-	0.0033	17.4	0.0	0.0051	16.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|15921379|ref|NP_377048.1|	-	0.0036	17.7	0.0	0.0076	16.7	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|15921379|ref|NP_377048.1|	-	0.004	17.4	0.0	0.0067	16.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
DOT1	PF08123.8	gi|15921379|ref|NP_377048.1|	-	0.0068	15.7	0.0	0.011	15.0	0.0	1.3	1	0	0	1	1	1	1	Histone	methylation	protein	DOT1
Fibrillarin	PF01269.12	gi|15921379|ref|NP_377048.1|	-	0.0081	15.1	0.1	0.012	14.5	0.0	1.2	1	0	0	1	1	1	1	Fibrillarin
Methyltransf_3	PF01596.12	gi|15921379|ref|NP_377048.1|	-	0.0084	15.1	0.0	0.012	14.6	0.0	1.3	1	0	0	1	1	1	1	O-methyltransferase
DREV	PF05219.7	gi|15921379|ref|NP_377048.1|	-	0.059	12.2	0.0	0.099	11.4	0.0	1.3	1	0	0	1	1	1	0	DREV	methyltransferase
Ubie_methyltran	PF01209.13	gi|15921379|ref|NP_377048.1|	-	0.07	12.2	0.0	0.11	11.6	0.0	1.3	1	0	0	1	1	1	0	ubiE/COQ5	methyltransferase	family
Glyco_hydro_15	PF00723.16	gi|15921380|ref|NP_377049.1|	-	6.1e-53	179.9	0.0	7.6e-49	166.4	0.0	2.1	1	1	1	2	2	2	2	Glycosyl	hydrolases	family	15
DUF608	PF04685.8	gi|15921380|ref|NP_377049.1|	-	0.00024	19.9	0.2	0.00045	19.0	0.1	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF608
TPR_4	PF07721.9	gi|15921380|ref|NP_377049.1|	-	0.0076	16.5	0.0	0.056	13.8	0.0	2.2	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|15921380|ref|NP_377049.1|	-	0.029	14.7	0.0	0.075	13.3	0.0	1.6	1	0	0	1	1	1	0	Tetratricopeptide	repeat
PIN	PF01850.16	gi|15921381|ref|NP_377050.1|	-	2.3e-17	63.4	2.0	2.8e-17	63.1	1.4	1.1	1	0	0	1	1	1	1	PIN	domain
NYN	PF01936.13	gi|15921381|ref|NP_377050.1|	-	0.017	15.4	0.2	0.021	15.1	0.1	1.1	1	0	0	1	1	1	0	NYN	domain
DUF217	PF02697.9	gi|15921382|ref|NP_377051.1|	-	6.5e-25	87.1	9.2	7.6e-25	86.9	6.4	1.1	1	0	0	1	1	1	1	Uncharacterized	ACR,	COG1753
efThoc1	PF11957.3	gi|15921382|ref|NP_377051.1|	-	0.022	13.2	0.6	0.024	13.1	0.4	1.0	1	0	0	1	1	1	0	THO	complex	subunit	1	transcription	elongation	factor
HU-DNA_bdg	PF14848.1	gi|15921382|ref|NP_377051.1|	-	0.034	13.8	0.1	0.049	13.3	0.1	1.3	1	1	0	1	1	1	0	DNA-binding	domain
WPP	PF13943.1	gi|15921382|ref|NP_377051.1|	-	0.059	13.5	0.4	0.083	13.1	0.2	1.4	1	1	0	1	1	1	0	WPP	domain
TRCF	PF03461.10	gi|15921382|ref|NP_377051.1|	-	0.073	13.0	0.5	0.073	13.0	0.3	1.8	2	0	0	2	2	2	0	TRCF	domain
DUF2680	PF10925.3	gi|15921382|ref|NP_377051.1|	-	0.13	12.1	1.3	0.14	12.0	0.2	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2680)
SUV3_C	PF12513.3	gi|15921382|ref|NP_377051.1|	-	0.21	11.0	3.3	1.1	8.7	0.2	2.6	2	0	0	2	2	2	0	Mitochondrial	degradasome	RNA	helicase	subunit	C	terminal
NblA	PF04485.7	gi|15921382|ref|NP_377051.1|	-	0.24	11.3	3.1	0.27	11.1	1.0	2.0	2	0	0	2	2	2	0	Phycobilisome	degradation	protein	nblA
Latarcin	PF10279.4	gi|15921382|ref|NP_377051.1|	-	0.28	11.4	2.0	0.44	10.7	1.4	1.6	1	1	0	1	1	1	0	Latarcin	precursor
RHH_1	PF01402.16	gi|15921382|ref|NP_377051.1|	-	1	9.3	4.4	4.1	7.4	0.1	2.8	2	1	0	2	2	2	0	Ribbon-helix-helix	protein,	copG	family
Rad50_zn_hook	PF04423.9	gi|15921382|ref|NP_377051.1|	-	2	7.9	5.5	13	5.3	0.2	2.4	2	1	0	2	2	2	0	Rad50	zinc	hook	motif
DUF104	PF01954.11	gi|15921382|ref|NP_377051.1|	-	2.2	8.3	7.1	6.7	6.8	0.2	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF104
SOR	PF07682.6	gi|15921384|ref|NP_377053.1|	-	2.2e-178	591.2	1.7	2.5e-178	591.1	1.2	1.0	1	0	0	1	1	1	1	Sulphur	oxygenase	reductase
ABM	PF03992.11	gi|15921384|ref|NP_377053.1|	-	0.0067	16.4	2.3	17	5.4	0.0	3.5	3	1	0	3	3	3	3	Antibiotic	biosynthesis	monooxygenase
Hema_stalk	PF08720.5	gi|15921385|ref|NP_377054.1|	-	0.07	12.6	0.1	0.17	11.4	0.1	1.6	1	0	0	1	1	1	0	Influenza	C	hemagglutinin	stalk
tRNA_anti-like	PF12869.2	gi|15921385|ref|NP_377054.1|	-	0.12	11.8	0.5	0.87	9.0	0.1	2.3	2	0	0	2	2	2	0	tRNA_anti-like
CoatB	PF10389.4	gi|15921386|ref|NP_377055.1|	-	0.27	11.1	0.1	0.27	11.1	0.1	3.0	3	0	0	3	3	3	0	Bacteriophage	coat	protein	B
DAO	PF01266.19	gi|15921387|ref|NP_377056.1|	-	1.1e-12	47.5	0.9	6.3e-07	28.6	0.1	2.4	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|15921387|ref|NP_377056.1|	-	1e-11	44.6	0.1	2.4e-11	43.4	0.0	1.6	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.12	gi|15921387|ref|NP_377056.1|	-	2.3e-10	39.9	0.9	2.5e-08	33.3	0.1	2.3	2	0	0	2	2	2	1	Thi4	family
Pyr_redox	PF00070.22	gi|15921387|ref|NP_377056.1|	-	3.3e-09	37.0	1.4	0.00027	21.2	0.1	2.5	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.19	gi|15921387|ref|NP_377056.1|	-	6.9e-09	35.0	0.5	2.9e-05	23.1	0.1	2.2	2	0	0	2	2	2	2	FAD	binding	domain
HI0933_like	PF03486.9	gi|15921387|ref|NP_377056.1|	-	2.1e-08	33.0	1.0	5.9e-05	21.7	0.1	2.1	2	0	0	2	2	2	2	HI0933-like	protein
Pyr_redox_3	PF13738.1	gi|15921387|ref|NP_377056.1|	-	5.8e-07	29.7	0.1	0.00022	21.3	0.0	2.3	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|15921387|ref|NP_377056.1|	-	1.1e-06	28.0	0.1	4.3e-06	26.0	0.1	1.8	2	0	0	2	2	2	1	FAD	binding	domain
GIDA	PF01134.17	gi|15921387|ref|NP_377056.1|	-	3.6e-06	26.0	0.4	0.001	17.9	0.1	2.4	2	0	0	2	2	2	2	Glucose	inhibited	division	protein	A
Pyr_redox_2	PF07992.9	gi|15921387|ref|NP_377056.1|	-	7.8e-06	25.9	0.0	2.5e-05	24.2	0.0	1.9	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_oxidored	PF12831.2	gi|15921387|ref|NP_377056.1|	-	2.6e-05	23.4	0.3	0.00089	18.4	0.1	2.1	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Amino_oxidase	PF01593.19	gi|15921387|ref|NP_377056.1|	-	4.5e-05	22.7	0.2	0.00044	19.4	0.0	2.3	2	1	0	2	2	2	1	Flavin	containing	amine	oxidoreductase
Lycopene_cycl	PF05834.7	gi|15921387|ref|NP_377056.1|	-	0.00032	19.7	0.2	0.0026	16.7	0.1	2.0	2	0	0	2	2	2	1	Lycopene	cyclase	protein
GDI	PF00996.13	gi|15921387|ref|NP_377056.1|	-	0.0014	16.9	0.8	0.23	9.7	0.0	2.2	2	0	0	2	2	2	2	GDP	dissociation	inhibitor
GMC_oxred_N	PF00732.14	gi|15921387|ref|NP_377056.1|	-	0.0026	16.9	0.2	0.04	13.0	0.0	2.0	2	0	0	2	2	2	1	GMC	oxidoreductase
Trp_halogenase	PF04820.9	gi|15921387|ref|NP_377056.1|	-	0.012	14.3	1.0	0.17	10.4	0.1	2.3	2	0	0	2	2	2	0	Tryptophan	halogenase
IlvN	PF07991.7	gi|15921387|ref|NP_377056.1|	-	0.014	14.7	0.5	0.49	9.7	0.0	2.3	2	0	0	2	2	2	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
UDPG_MGDP_dh_N	PF03721.9	gi|15921387|ref|NP_377056.1|	-	0.018	14.4	0.1	0.039	13.3	0.0	1.5	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
NAD_binding_9	PF13454.1	gi|15921387|ref|NP_377056.1|	-	0.021	14.6	0.0	0.31	10.7	0.0	2.3	2	0	0	2	2	2	0	FAD-NAD(P)-binding
TrkA_N	PF02254.13	gi|15921387|ref|NP_377056.1|	-	0.047	13.6	0.6	0.19	11.7	0.0	2.2	2	0	0	2	2	2	0	TrkA-N	domain
2-Hacid_dh_C	PF02826.14	gi|15921387|ref|NP_377056.1|	-	0.052	12.6	0.7	2.7	7.1	0.0	2.4	2	0	0	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
3HCDH_N	PF02737.13	gi|15921387|ref|NP_377056.1|	-	0.11	12.1	0.1	0.18	11.4	0.0	1.3	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
UPF0054	PF02130.12	gi|15921388|ref|NP_377057.1|	-	0.12	11.6	0.1	0.15	11.3	0.1	1.3	1	1	0	1	1	1	0	Uncharacterized	protein	family	UPF0054
MFS_1	PF07690.11	gi|15921389|ref|NP_377058.1|	-	1.4e-19	70.0	39.0	1.4e-19	70.0	27.0	2.2	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|15921389|ref|NP_377058.1|	-	4.5e-17	61.7	33.0	6.2e-16	58.0	22.9	2.4	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
UPF0104	PF03706.8	gi|15921389|ref|NP_377058.1|	-	0.00056	19.2	6.9	0.00056	19.2	4.8	4.3	2	2	2	4	4	4	2	Uncharacterised	protein	family	(UPF0104)
MIase	PF02426.11	gi|15921391|ref|NP_377060.1|	-	8.4e-11	41.5	0.1	1e-10	41.2	0.0	1.1	1	0	0	1	1	1	1	Muconolactone	delta-isomerase
Unstab_antitox	PF09720.5	gi|15921391|ref|NP_377060.1|	-	0.0047	16.5	0.1	0.0082	15.8	0.0	1.4	1	0	0	1	1	1	1	Putative	addiction	module	component
AsnC_trans_reg	PF01037.16	gi|15921391|ref|NP_377060.1|	-	0.035	13.8	0.1	0.07	12.8	0.0	1.6	1	1	1	2	2	2	0	AsnC	family
Vint	PF14623.1	gi|15921391|ref|NP_377060.1|	-	0.062	12.7	0.0	0.077	12.4	0.0	1.1	1	0	0	1	1	1	0	Hint-domain
GYD	PF08734.6	gi|15921391|ref|NP_377060.1|	-	0.063	13.0	0.0	0.072	12.8	0.0	1.3	1	0	0	1	1	1	0	GYD	domain
RNase_P_Rpp14	PF01900.14	gi|15921391|ref|NP_377060.1|	-	0.079	12.8	0.0	0.094	12.6	0.0	1.1	1	0	0	1	1	1	0	Rpp14/Pop5	family
CbiQ	PF02361.11	gi|15921392|ref|NP_377061.1|	-	8.2e-10	38.6	15.5	8.2e-10	38.6	10.8	1.6	2	0	0	2	2	2	1	Cobalt	transport	protein
DoxX	PF07681.7	gi|15921392|ref|NP_377061.1|	-	0.046	14.1	1.3	0.099	13.0	0.1	2.2	2	1	0	2	2	2	0	DoxX
Gemini_AC4_5_2	PF08464.5	gi|15921392|ref|NP_377061.1|	-	0.2	11.3	1.1	3.6	7.4	0.1	2.5	2	0	0	2	2	2	0	Geminivirus	AC4/5	conserved	region
UXS1_N	PF11803.3	gi|15921392|ref|NP_377061.1|	-	0.39	10.4	2.1	0.41	10.4	0.0	2.1	2	0	0	2	2	2	0	UDP-glucuronate	decarboxylase	N-terminal
ABC_tran	PF00005.22	gi|15921393|ref|NP_377062.1|	-	3.4e-49	166.6	0.2	3e-23	82.6	0.1	2.3	2	0	0	2	2	2	2	ABC	transporter
AAA_21	PF13304.1	gi|15921393|ref|NP_377062.1|	-	2e-21	77.2	13.8	4.1e-07	30.2	0.5	4.2	2	2	1	3	3	3	3	AAA	domain
AAA_15	PF13175.1	gi|15921393|ref|NP_377062.1|	-	1.2e-13	50.9	6.1	7.8e-06	25.1	0.4	3.3	3	1	0	3	3	3	2	AAA	ATPase	domain
AAA_29	PF13555.1	gi|15921393|ref|NP_377062.1|	-	5.3e-13	48.2	0.8	2.4e-05	23.7	0.0	2.5	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
SMC_N	PF02463.14	gi|15921393|ref|NP_377062.1|	-	6e-13	48.5	4.0	4.5e-05	22.7	0.0	3.7	2	2	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|15921393|ref|NP_377062.1|	-	6.8e-12	46.1	7.1	5.4e-07	30.1	0.5	2.8	2	2	0	2	2	2	2	AAA	domain
DUF258	PF03193.11	gi|15921393|ref|NP_377062.1|	-	3e-09	36.2	1.0	0.00075	18.7	0.0	2.3	2	0	0	2	2	2	2	Protein	of	unknown	function,	DUF258
T2SE	PF00437.15	gi|15921393|ref|NP_377062.1|	-	5.5e-08	32.0	0.1	6.8e-05	21.9	0.1	2.3	2	0	0	2	2	2	2	Type	II/IV	secretion	system	protein
AAA_17	PF13207.1	gi|15921393|ref|NP_377062.1|	-	1.7e-07	32.0	0.8	0.027	15.3	0.1	3.2	3	1	0	3	3	2	2	AAA	domain
AAA_16	PF13191.1	gi|15921393|ref|NP_377062.1|	-	3.5e-07	30.3	0.0	0.0075	16.2	0.0	2.3	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_22	PF13401.1	gi|15921393|ref|NP_377062.1|	-	5.6e-07	29.7	0.4	0.04	14.0	0.1	2.7	2	2	0	2	2	2	2	AAA	domain
NACHT	PF05729.7	gi|15921393|ref|NP_377062.1|	-	1.4e-06	28.0	0.4	0.036	13.7	0.0	2.4	2	0	0	2	2	2	2	NACHT	domain
ABC_ATPase	PF09818.4	gi|15921393|ref|NP_377062.1|	-	1.7e-06	26.9	0.8	0.044	12.3	0.2	2.7	3	0	0	3	3	2	2	Predicted	ATPase	of	the	ABC	class
AAA_25	PF13481.1	gi|15921393|ref|NP_377062.1|	-	1.9e-06	27.4	0.4	0.036	13.4	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
Miro	PF08477.8	gi|15921393|ref|NP_377062.1|	-	2e-06	28.2	0.2	0.077	13.4	0.0	2.7	2	0	0	2	2	2	2	Miro-like	protein
FtsK_SpoIIIE	PF01580.13	gi|15921393|ref|NP_377062.1|	-	1.3e-05	24.7	0.2	0.0054	16.2	0.0	2.4	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
MMR_HSR1	PF01926.18	gi|15921393|ref|NP_377062.1|	-	2e-05	24.5	2.2	0.043	13.7	0.0	2.9	2	1	0	2	2	2	2	50S	ribosome-binding	GTPase
Mg_chelatase	PF01078.16	gi|15921393|ref|NP_377062.1|	-	2.2e-05	23.7	0.7	0.12	11.4	0.0	3.0	3	0	0	3	3	3	2	Magnesium	chelatase,	subunit	ChlI
AAA_10	PF12846.2	gi|15921393|ref|NP_377062.1|	-	7.1e-05	22.3	4.8	0.014	14.8	0.2	2.7	2	1	0	2	2	2	2	AAA-like	domain
AAA_30	PF13604.1	gi|15921393|ref|NP_377062.1|	-	9.1e-05	22.1	0.0	0.19	11.2	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
MobB	PF03205.9	gi|15921393|ref|NP_377062.1|	-	0.00012	21.8	0.2	0.57	9.8	0.0	2.6	2	0	0	2	2	2	2	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_18	PF13238.1	gi|15921393|ref|NP_377062.1|	-	0.00013	22.2	5.8	0.068	13.4	0.2	2.9	3	2	0	3	3	2	2	AAA	domain
Arch_ATPase	PF01637.13	gi|15921393|ref|NP_377062.1|	-	0.00016	21.4	0.9	0.015	15.0	0.1	2.5	2	0	0	2	2	2	1	Archaeal	ATPase
G-alpha	PF00503.15	gi|15921393|ref|NP_377062.1|	-	0.00046	18.9	0.5	0.053	12.2	0.1	2.2	2	0	0	2	2	2	1	G-protein	alpha	subunit
Dynamin_N	PF00350.18	gi|15921393|ref|NP_377062.1|	-	0.00076	19.3	2.6	0.51	10.1	0.0	2.8	3	0	0	3	3	2	2	Dynamin	family
AAA_33	PF13671.1	gi|15921393|ref|NP_377062.1|	-	0.00077	19.3	0.0	1.6	8.5	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_24	PF13479.1	gi|15921393|ref|NP_377062.1|	-	0.00078	19.0	0.1	0.37	10.3	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
MCM	PF00493.18	gi|15921393|ref|NP_377062.1|	-	0.00095	18.0	0.1	0.77	8.4	0.0	2.2	2	0	0	2	2	2	2	MCM2/3/5	family
DUF815	PF05673.8	gi|15921393|ref|NP_377062.1|	-	0.0011	17.9	0.2	0.85	8.4	0.0	2.3	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
RNA_helicase	PF00910.17	gi|15921393|ref|NP_377062.1|	-	0.0011	19.0	0.1	0.81	9.8	0.0	2.5	2	0	0	2	2	2	1	RNA	helicase
NB-ARC	PF00931.17	gi|15921393|ref|NP_377062.1|	-	0.0012	17.7	0.6	0.083	11.7	0.0	2.6	2	1	0	2	2	2	1	NB-ARC	domain
AAA_5	PF07728.9	gi|15921393|ref|NP_377062.1|	-	0.0023	17.6	0.2	1.9	8.2	0.0	2.8	3	0	0	3	3	2	1	AAA	domain	(dynein-related	subfamily)
Septin	PF00735.13	gi|15921393|ref|NP_377062.1|	-	0.0023	17.0	0.2	0.085	11.8	0.0	2.2	2	0	0	2	2	2	1	Septin
DUF2813	PF11398.3	gi|15921393|ref|NP_377062.1|	-	0.0026	16.8	0.2	0.0066	15.5	0.0	1.6	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2813)
AAA	PF00004.24	gi|15921393|ref|NP_377062.1|	-	0.0026	17.9	0.2	0.36	11.0	0.1	3.0	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_19	PF13245.1	gi|15921393|ref|NP_377062.1|	-	0.003	17.2	0.1	3.6	7.3	0.0	2.6	2	0	0	2	2	2	0	Part	of	AAA	domain
PduV-EutP	PF10662.4	gi|15921393|ref|NP_377062.1|	-	0.0054	16.2	0.1	2.8	7.4	0.0	2.5	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
FeoB_N	PF02421.13	gi|15921393|ref|NP_377062.1|	-	0.0068	15.6	0.1	4	6.6	0.0	2.4	2	0	0	2	2	2	0	Ferrous	iron	transport	protein	B
UPF0079	PF02367.12	gi|15921393|ref|NP_377062.1|	-	0.0078	15.8	0.2	5.2	6.7	0.0	2.4	2	0	0	2	2	2	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_28	PF13521.1	gi|15921393|ref|NP_377062.1|	-	0.0079	16.1	0.1	1.8	8.5	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
ATP_bind_1	PF03029.12	gi|15921393|ref|NP_377062.1|	-	0.0086	15.6	0.0	3.9	6.9	0.0	2.4	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
Zeta_toxin	PF06414.7	gi|15921393|ref|NP_377062.1|	-	0.0096	15.0	0.1	0.29	10.1	0.0	2.3	2	0	0	2	2	2	1	Zeta	toxin
cobW	PF02492.14	gi|15921393|ref|NP_377062.1|	-	0.0097	15.3	0.8	1.8	8.0	0.0	2.6	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
SbcCD_C	PF13558.1	gi|15921393|ref|NP_377062.1|	-	0.019	14.8	0.0	3.3	7.7	0.0	3.2	2	1	0	2	2	2	0	Putative	exonuclease	SbcCD,	C	subunit
NTPase_1	PF03266.10	gi|15921393|ref|NP_377062.1|	-	0.019	14.6	2.0	1	9.0	0.0	2.8	3	0	0	3	3	2	0	NTPase
AAA_14	PF13173.1	gi|15921393|ref|NP_377062.1|	-	0.027	14.3	0.1	12	5.8	0.0	3.2	3	0	0	3	3	2	0	AAA	domain
PRK	PF00485.13	gi|15921393|ref|NP_377062.1|	-	0.029	13.9	0.2	0.92	9.0	0.0	2.3	2	0	0	2	2	2	0	Phosphoribulokinase	/	Uridine	kinase	family
KAP_NTPase	PF07693.9	gi|15921393|ref|NP_377062.1|	-	0.029	13.3	0.0	0.3	10.0	0.0	2.1	2	0	0	2	2	2	0	KAP	family	P-loop	domain
Rad17	PF03215.10	gi|15921393|ref|NP_377062.1|	-	0.046	12.4	0.0	2.4	6.7	0.0	2.3	2	0	0	2	2	2	0	Rad17	cell	cycle	checkpoint	protein
PIF1	PF05970.9	gi|15921393|ref|NP_377062.1|	-	0.052	12.4	0.0	0.32	9.8	0.0	2.0	2	0	0	2	2	2	0	PIF1-like	helicase
ATP-synt_ab	PF00006.20	gi|15921393|ref|NP_377062.1|	-	0.056	12.9	0.2	0.92	8.9	0.0	2.1	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
IIGP	PF05049.8	gi|15921393|ref|NP_377062.1|	-	0.056	12.2	1.3	1.8	7.3	0.1	2.4	2	0	0	2	2	2	0	Interferon-inducible	GTPase	(IIGP)
APS_kinase	PF01583.15	gi|15921393|ref|NP_377062.1|	-	0.13	11.8	0.2	1.4	8.5	0.0	2.2	2	0	0	2	2	2	0	Adenylylsulphate	kinase
MutS_V	PF00488.16	gi|15921393|ref|NP_377062.1|	-	0.14	11.5	0.1	14	4.9	0.0	2.2	2	0	0	2	2	2	0	MutS	domain	V
Viral_helicase1	PF01443.13	gi|15921393|ref|NP_377062.1|	-	0.15	11.5	0.1	7.8	5.9	0.0	2.4	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
AIG1	PF04548.11	gi|15921393|ref|NP_377062.1|	-	0.17	10.9	1.2	0.22	10.6	0.1	1.8	2	0	0	2	2	1	0	AIG1	family
DUF2075	PF09848.4	gi|15921393|ref|NP_377062.1|	-	0.18	10.7	0.1	1.7	7.5	0.1	2.0	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
DAP3	PF10236.4	gi|15921393|ref|NP_377062.1|	-	0.24	10.3	1.0	4.9	5.9	0.0	2.2	2	0	0	2	2	2	0	Mitochondrial	ribosomal	death-associated	protein	3
Pox_A32	PF04665.7	gi|15921393|ref|NP_377062.1|	-	0.29	10.3	4.1	11	5.2	0.0	2.9	3	0	0	3	3	3	0	Poxvirus	A32	protein
DUF87	PF01935.12	gi|15921393|ref|NP_377062.1|	-	0.3	10.8	5.1	8.3	6.1	0.1	3.2	3	0	0	3	3	3	0	Domain	of	unknown	function	DUF87
IstB_IS21	PF01695.12	gi|15921393|ref|NP_377062.1|	-	0.3	10.4	1.0	19	4.6	0.0	3.0	3	0	0	3	3	3	0	IstB-like	ATP	binding	protein
CbiA	PF01656.18	gi|15921393|ref|NP_377062.1|	-	0.33	10.3	7.6	5.7	6.2	0.1	3.4	3	1	0	3	3	3	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Peptidase_A8	PF01252.13	gi|15921394|ref|NP_377063.1|	-	1.3	8.6	6.8	0.79	9.3	1.6	2.3	1	1	1	2	2	2	0	Signal	peptidase	(SPase)	II
DUF1900	PF08954.6	gi|15921395|ref|NP_377064.1|	-	0.0057	16.1	0.2	3.8	7.0	0.0	2.5	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF1900)
SplA	PF11132.3	gi|15921395|ref|NP_377064.1|	-	0.017	14.8	0.3	2.3	8.0	0.1	2.6	2	0	0	2	2	2	0	Transcriptional	regulator	protein	(SplA)
Arylesterase	PF01731.15	gi|15921395|ref|NP_377064.1|	-	0.019	14.9	4.7	0.042	13.8	0.3	2.7	2	0	0	2	2	2	0	Arylesterase
Lactonase	PF10282.4	gi|15921395|ref|NP_377064.1|	-	0.03	13.3	0.1	0.18	10.8	0.0	2.0	2	0	0	2	2	2	0	Lactonase,	7-bladed	beta-propeller
FlgD_ig	PF13860.1	gi|15921395|ref|NP_377064.1|	-	0.052	13.2	0.1	0.27	11.0	0.1	2.1	2	0	0	2	2	2	0	FlgD	Ig-like	domain
SKG6	PF08693.5	gi|15921395|ref|NP_377064.1|	-	3.6	6.9	6.3	7.5	5.9	4.3	1.5	1	0	0	1	1	1	0	Transmembrane	alpha-helix	domain
HTH_23	PF13384.1	gi|15921396|ref|NP_377065.1|	-	4.8e-08	32.4	0.1	1.1e-07	31.2	0.0	1.7	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.1	gi|15921396|ref|NP_377065.1|	-	5.4e-07	29.4	0.1	1.2e-06	28.4	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
Terminase_5	PF06056.7	gi|15921396|ref|NP_377065.1|	-	1.6e-06	27.5	0.0	3.6e-06	26.4	0.0	1.6	1	0	0	1	1	1	1	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_38	PF13936.1	gi|15921396|ref|NP_377065.1|	-	1.3e-05	24.6	0.0	2.1e-05	23.9	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
Zn_Tnp_IS1	PF03811.8	gi|15921396|ref|NP_377065.1|	-	6.7e-05	22.2	8.2	0.00019	20.8	5.7	1.8	1	0	0	1	1	1	1	InsA	N-terminal	domain
Sigma70_r4_2	PF08281.7	gi|15921396|ref|NP_377065.1|	-	0.00037	19.8	0.0	0.00071	18.9	0.0	1.4	1	0	0	1	1	1	1	Sigma-70,	region	4
DDE_Tnp_IS1	PF03400.8	gi|15921396|ref|NP_377065.1|	-	0.00069	19.7	1.3	0.0014	18.7	0.9	1.5	1	0	0	1	1	1	1	IS1	transposase
HTH_29	PF13551.1	gi|15921396|ref|NP_377065.1|	-	0.001	19.1	0.0	0.0018	18.3	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_Tnp_1	PF01527.15	gi|15921396|ref|NP_377065.1|	-	0.0043	16.9	0.1	0.01	15.7	0.0	1.6	1	0	0	1	1	1	1	Transposase
DDE_Tnp_IS66	PF03050.9	gi|15921396|ref|NP_377065.1|	-	0.005	16.0	0.5	0.0063	15.7	0.4	1.2	1	0	0	1	1	1	1	Transposase	IS66	family
HTH_40	PF14493.1	gi|15921396|ref|NP_377065.1|	-	0.009	16.2	0.0	0.013	15.6	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_Tnp_ISL3	PF13542.1	gi|15921396|ref|NP_377065.1|	-	0.039	13.1	0.0	0.11	11.7	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	transposase	family	ISL3
Zn_Tnp_IS1595	PF12760.2	gi|15921396|ref|NP_377065.1|	-	0.058	13.2	5.1	0.12	12.2	3.5	1.5	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|15921396|ref|NP_377065.1|	-	0.063	12.9	1.5	0.16	11.6	1.0	1.6	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
GerE	PF00196.14	gi|15921396|ref|NP_377065.1|	-	0.098	11.9	0.0	0.19	11.0	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
DZR	PF12773.2	gi|15921396|ref|NP_377065.1|	-	0.2	11.4	2.8	3.3	7.6	2.0	2.2	1	1	0	1	1	1	0	Double	zinc	ribbon
Lar_restr_allev	PF14354.1	gi|15921396|ref|NP_377065.1|	-	0.61	10.4	2.6	1.2	9.4	0.5	2.3	2	0	0	2	2	2	0	Restriction	alleviation	protein	Lar
Zn-ribbon_8	PF09723.5	gi|15921396|ref|NP_377065.1|	-	0.88	9.5	5.4	3.7	7.5	0.6	2.6	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-ribbon_3	PF13248.1	gi|15921396|ref|NP_377065.1|	-	2.5	7.3	5.0	20	4.5	2.0	2.8	2	1	0	2	2	2	0	zinc-ribbon	domain
zf-ISL3	PF14690.1	gi|15921396|ref|NP_377065.1|	-	4.3	7.4	11.7	15	5.7	2.2	2.9	1	1	2	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Nudix_N_2	PF14803.1	gi|15921396|ref|NP_377065.1|	-	4.8	6.9	6.8	11	5.7	4.7	1.6	1	0	0	1	1	1	0	Nudix	N-terminal
DUF364	PF04016.7	gi|15921397|ref|NP_377066.1|	-	1.1e-43	148.0	0.0	1.7e-43	147.4	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF364)
DUF4213	PF13938.1	gi|15921397|ref|NP_377066.1|	-	4.2e-21	74.8	0.1	1.1e-19	70.3	0.0	2.3	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4213)
HEPN	PF05168.9	gi|15921398|ref|NP_377067.1|	-	1.3e-31	108.9	1.2	1.4e-31	108.7	0.8	1.0	1	0	0	1	1	1	1	HEPN	domain
Cbl_N3	PF02762.9	gi|15921398|ref|NP_377067.1|	-	0.0035	16.9	0.1	0.007	15.9	0.0	1.5	1	1	0	1	1	1	1	CBL	proto-oncogene	N-terminus,	SH2-like	domain
RecO_C	PF02565.10	gi|15921398|ref|NP_377067.1|	-	0.021	14.6	0.0	0.03	14.1	0.0	1.2	1	0	0	1	1	1	0	Recombination	protein	O	C	terminal
NTP_transf_2	PF01909.18	gi|15921399|ref|NP_377068.1|	-	2.4e-09	37.4	0.2	3.2e-09	36.9	0.0	1.4	2	0	0	2	2	2	1	Nucleotidyltransferase	domain
VirC1	PF07015.6	gi|15921399|ref|NP_377068.1|	-	0.13	11.2	0.0	0.15	11.1	0.0	1.1	1	0	0	1	1	1	0	VirC1	protein
Polysacc_deac_1	PF01522.16	gi|15921399|ref|NP_377068.1|	-	0.15	11.6	0.0	0.39	10.3	0.0	1.6	1	1	1	2	2	2	0	Polysaccharide	deacetylase
AAA_14	PF13173.1	gi|15921400|ref|NP_377069.1|	-	4.9e-23	81.4	0.5	2.1e-22	79.3	0.1	2.2	2	0	0	2	2	2	1	AAA	domain
DUF4143	PF13635.1	gi|15921400|ref|NP_377069.1|	-	4e-07	30.1	3.5	5.6e-07	29.6	2.3	1.6	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
Arch_ATPase	PF01637.13	gi|15921400|ref|NP_377069.1|	-	9.1e-07	28.7	11.9	3e-05	23.8	0.0	3.5	1	1	3	4	4	4	2	Archaeal	ATPase
AAA	PF00004.24	gi|15921400|ref|NP_377069.1|	-	0.00028	21.0	0.1	0.00072	19.7	0.1	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
RNA_helicase	PF00910.17	gi|15921400|ref|NP_377069.1|	-	0.028	14.6	0.9	0.15	12.2	0.0	2.6	2	0	0	2	2	2	0	RNA	helicase
MobB	PF03205.9	gi|15921400|ref|NP_377069.1|	-	0.068	12.8	0.0	0.24	11.0	0.0	2.0	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
DUF4251	PF14059.1	gi|15921400|ref|NP_377069.1|	-	0.11	12.3	1.0	0.37	10.6	0.2	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4251)
AAA_22	PF13401.1	gi|15921400|ref|NP_377069.1|	-	0.15	12.2	0.3	1.2	9.2	0.2	2.4	1	1	0	1	1	1	0	AAA	domain
AAA_21	PF13304.1	gi|15921401|ref|NP_377070.1|	-	1.6e-09	38.1	2.7	2.7e-09	37.4	1.9	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|15921401|ref|NP_377070.1|	-	0.0032	16.5	6.6	0.0085	15.1	4.6	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
SMC_N	PF02463.14	gi|15921401|ref|NP_377070.1|	-	0.051	12.8	0.6	0.54	9.4	0.2	2.2	2	0	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
Flu_NS2	PF00601.14	gi|15921401|ref|NP_377070.1|	-	0.065	13.4	0.1	0.16	12.1	0.0	1.8	2	1	0	2	2	2	0	Influenza	non-structural	protein	(NS2)
AAA_21	PF13304.1	gi|15921402|ref|NP_377071.1|	-	1.5e-15	57.9	14.3	3.2e-15	56.8	9.9	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.1	gi|15921402|ref|NP_377071.1|	-	1.6e-07	31.8	5.7	4.1e-07	30.5	4.0	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|15921402|ref|NP_377071.1|	-	5.4e-07	28.9	1.0	5.4e-07	28.9	0.7	2.6	1	1	0	2	2	2	1	AAA	ATPase	domain
AAA_29	PF13555.1	gi|15921402|ref|NP_377071.1|	-	0.019	14.4	0.0	0.04	13.4	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
ABC_tran	PF00005.22	gi|15921402|ref|NP_377071.1|	-	0.039	14.2	0.0	0.14	12.5	0.0	1.9	2	0	0	2	2	2	0	ABC	transporter
DUF4496	PF14908.1	gi|15921402|ref|NP_377071.1|	-	0.11	12.3	0.1	5.2	6.9	0.0	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4496)
DUF3991	PF13154.1	gi|15921402|ref|NP_377071.1|	-	0.12	12.5	0.0	0.26	11.4	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3991)
Fic	PF02661.13	gi|15921403|ref|NP_377072.1|	-	2.3e-08	34.6	0.2	7.7e-08	32.9	0.0	2.0	2	1	0	2	2	2	1	Fic/DOC	family
AAA_21	PF13304.1	gi|15921404|ref|NP_377073.1|	-	1.9e-33	116.6	7.3	2.4e-33	116.3	5.1	1.1	1	0	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|15921404|ref|NP_377073.1|	-	1.2e-15	57.5	10.2	4.9e-09	35.7	2.0	2.2	2	0	0	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|15921404|ref|NP_377073.1|	-	1.5e-12	47.2	1.3	2.1e-08	33.6	0.2	2.4	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|15921404|ref|NP_377073.1|	-	1.8e-10	41.4	1.8	1.8e-10	41.4	1.3	2.0	2	2	0	2	2	2	1	AAA	domain
ABC_tran	PF00005.22	gi|15921404|ref|NP_377073.1|	-	5.5e-06	26.7	0.4	0.0016	18.7	0.2	2.4	2	0	0	2	2	2	1	ABC	transporter
AAA_22	PF13401.1	gi|15921404|ref|NP_377073.1|	-	3.5e-05	23.9	0.0	0.35	11.0	0.0	2.3	2	0	0	2	2	2	2	AAA	domain
AAA	PF00004.24	gi|15921404|ref|NP_377073.1|	-	0.00054	20.1	0.0	1.1	9.5	0.0	2.3	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_29	PF13555.1	gi|15921404|ref|NP_377073.1|	-	0.0013	18.2	0.0	0.0024	17.3	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_14	PF13173.1	gi|15921404|ref|NP_377073.1|	-	0.034	14.0	0.5	2.7	7.8	0.1	2.7	2	1	0	2	2	2	0	AAA	domain
TOM_sub5	PF15178.1	gi|15921404|ref|NP_377073.1|	-	0.04	13.6	0.1	0.099	12.3	0.1	1.6	1	0	0	1	1	1	0	Mitochondrial	import	receptor	subunit	TOM5	homolog
Arch_ATPase	PF01637.13	gi|15921404|ref|NP_377073.1|	-	0.058	13.0	5.5	0.38	10.3	0.1	2.9	2	1	0	3	3	3	0	Archaeal	ATPase
AAA_5	PF07728.9	gi|15921404|ref|NP_377073.1|	-	0.059	13.1	0.1	1.6	8.4	0.0	2.4	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
AAA_13	PF13166.1	gi|15921404|ref|NP_377073.1|	-	0.067	11.6	0.1	0.13	10.7	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_16	PF13191.1	gi|15921404|ref|NP_377073.1|	-	0.082	12.8	0.0	0.16	11.9	0.0	1.5	1	0	0	1	1	1	0	AAA	ATPase	domain
MobB	PF03205.9	gi|15921404|ref|NP_377073.1|	-	0.084	12.5	0.1	0.2	11.3	0.0	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
DUF258	PF03193.11	gi|15921404|ref|NP_377073.1|	-	0.095	11.8	0.2	0.16	11.1	0.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
DUF573	PF04504.9	gi|15921404|ref|NP_377073.1|	-	0.1	12.8	0.0	0.25	11.6	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF573
cobW	PF02492.14	gi|15921404|ref|NP_377073.1|	-	0.21	11.0	0.7	0.45	9.9	0.1	1.8	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
DUF2813	PF11398.3	gi|15921404|ref|NP_377073.1|	-	0.33	9.9	2.6	1	8.3	0.6	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2813)
p450	PF00067.17	gi|15921406|ref|NP_377075.1|	-	5.3e-24	84.5	0.3	1.1e-21	76.9	0.0	2.9	3	0	0	3	3	3	3	Cytochrome	P450
DUF1028	PF06267.7	gi|15921407|ref|NP_377076.1|	-	3.3e-68	228.8	0.0	4e-68	228.5	0.0	1.1	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF1028)
PG_binding_2	PF08823.6	gi|15921407|ref|NP_377076.1|	-	2.2e-12	46.8	0.5	8.3e-12	45.0	0.4	2.0	1	0	0	1	1	1	1	Putative	peptidoglycan	binding	domain
AAA_5	PF07728.9	gi|15921409|ref|NP_377078.1|	-	2e-14	53.4	0.0	2.6e-13	49.8	0.0	2.2	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA	PF00004.24	gi|15921409|ref|NP_377078.1|	-	2.3e-07	31.0	0.1	3.3e-06	27.3	0.0	2.4	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.1	gi|15921409|ref|NP_377078.1|	-	1.3e-05	25.2	0.0	2.6e-05	24.2	0.0	1.5	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|15921409|ref|NP_377078.1|	-	0.00013	22.1	0.1	0.0028	17.8	0.0	2.8	2	1	0	2	2	1	1	AAA	domain
AAA_33	PF13671.1	gi|15921409|ref|NP_377078.1|	-	0.00023	21.0	0.0	0.00057	19.7	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|15921409|ref|NP_377078.1|	-	0.00033	20.3	0.0	0.0006	19.5	0.0	1.4	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_14	PF13173.1	gi|15921409|ref|NP_377078.1|	-	0.00035	20.4	0.0	0.003	17.4	0.0	2.7	2	2	1	3	3	3	1	AAA	domain
Mg_chelatase	PF01078.16	gi|15921409|ref|NP_377078.1|	-	0.0007	18.8	0.0	0.0012	18.0	0.0	1.3	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
AAA_17	PF13207.1	gi|15921409|ref|NP_377078.1|	-	0.00077	20.2	7.7	0.02	15.6	3.2	3.7	2	2	0	2	2	2	1	AAA	domain
IstB_IS21	PF01695.12	gi|15921409|ref|NP_377078.1|	-	0.00091	18.6	0.0	0.0024	17.3	0.0	1.6	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
Zeta_toxin	PF06414.7	gi|15921409|ref|NP_377078.1|	-	0.0015	17.6	0.0	0.0069	15.4	0.0	2.0	2	0	0	2	2	2	1	Zeta	toxin
TIP49	PF06068.8	gi|15921409|ref|NP_377078.1|	-	0.0018	17.0	0.0	0.0033	16.1	0.0	1.4	1	0	0	1	1	1	1	TIP49	C-terminus
AAA_11	PF13086.1	gi|15921409|ref|NP_377078.1|	-	0.0022	17.6	0.0	0.0036	16.9	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_25	PF13481.1	gi|15921409|ref|NP_377078.1|	-	0.0035	16.7	0.0	0.0066	15.8	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|15921409|ref|NP_377078.1|	-	0.0049	17.1	0.0	0.0049	17.1	0.0	2.9	3	1	0	3	3	2	1	AAA	domain
RuvB_N	PF05496.7	gi|15921409|ref|NP_377078.1|	-	0.0064	15.5	0.0	0.013	14.5	0.0	1.4	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_24	PF13479.1	gi|15921409|ref|NP_377078.1|	-	0.0072	15.9	0.1	0.013	15.1	0.1	1.4	1	0	0	1	1	1	1	AAA	domain
PhoH	PF02562.11	gi|15921409|ref|NP_377078.1|	-	0.0086	15.3	0.0	0.017	14.3	0.0	1.4	1	0	0	1	1	1	1	PhoH-like	protein
DUF2075	PF09848.4	gi|15921409|ref|NP_377078.1|	-	0.019	13.9	0.0	0.041	12.8	0.0	1.5	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_3	PF07726.6	gi|15921409|ref|NP_377078.1|	-	0.02	14.4	0.1	2.4	7.7	0.0	2.9	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
NB-ARC	PF00931.17	gi|15921409|ref|NP_377078.1|	-	0.029	13.2	0.0	0.13	11.0	0.0	1.9	2	0	0	2	2	2	0	NB-ARC	domain
Sigma54_activ_2	PF14532.1	gi|15921409|ref|NP_377078.1|	-	0.041	13.9	0.0	0.08	12.9	0.0	1.4	1	0	0	1	1	1	0	Sigma-54	interaction	domain
RNA_helicase	PF00910.17	gi|15921409|ref|NP_377078.1|	-	0.088	12.9	0.0	0.28	11.3	0.0	2.0	1	1	0	1	1	1	0	RNA	helicase
ATP-synt_ab	PF00006.20	gi|15921409|ref|NP_377078.1|	-	0.091	12.2	0.0	0.14	11.5	0.0	1.3	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
MobB	PF03205.9	gi|15921409|ref|NP_377078.1|	-	0.092	12.4	0.0	0.18	11.4	0.0	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NACHT	PF05729.7	gi|15921409|ref|NP_377078.1|	-	0.11	12.1	0.0	0.24	11.0	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
AAA_28	PF13521.1	gi|15921409|ref|NP_377078.1|	-	0.11	12.4	0.0	0.2	11.6	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_30	PF13604.1	gi|15921409|ref|NP_377078.1|	-	0.21	11.1	0.0	0.41	10.1	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_5	PF07728.9	gi|15921411|ref|NP_377080.1|	-	3.8e-12	46.1	0.0	1.9e-11	43.8	0.0	2.2	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA	PF00004.24	gi|15921411|ref|NP_377080.1|	-	2.5e-06	27.7	0.1	2.1e-05	24.7	0.0	2.6	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_17	PF13207.1	gi|15921411|ref|NP_377080.1|	-	3.5e-06	27.8	2.6	9.9e-06	26.3	0.1	3.0	2	2	1	3	3	3	1	AAA	domain
AAA_19	PF13245.1	gi|15921411|ref|NP_377080.1|	-	0.00043	19.9	0.1	0.00084	19.0	0.1	1.5	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_22	PF13401.1	gi|15921411|ref|NP_377080.1|	-	0.00051	20.1	0.5	0.0055	16.8	0.0	2.9	3	1	0	3	3	3	1	AAA	domain
AAA_16	PF13191.1	gi|15921411|ref|NP_377080.1|	-	0.00051	20.0	0.0	0.0045	17.0	0.0	2.4	2	1	0	2	2	2	1	AAA	ATPase	domain
PhoH	PF02562.11	gi|15921411|ref|NP_377080.1|	-	0.0006	19.1	0.0	0.0027	16.9	0.0	2.1	2	0	0	2	2	2	1	PhoH-like	protein
AAA_33	PF13671.1	gi|15921411|ref|NP_377080.1|	-	0.00081	19.2	0.0	0.0023	17.8	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.12	gi|15921411|ref|NP_377080.1|	-	0.0014	18.1	0.7	0.0044	16.4	0.1	2.1	2	1	0	2	2	2	1	IstB-like	ATP	binding	protein
RuvB_N	PF05496.7	gi|15921411|ref|NP_377080.1|	-	0.0032	16.5	0.0	0.0085	15.1	0.0	1.7	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
Mg_chelatase	PF01078.16	gi|15921411|ref|NP_377080.1|	-	0.0038	16.4	0.0	0.0065	15.6	0.0	1.3	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
AAA_28	PF13521.1	gi|15921411|ref|NP_377080.1|	-	0.0053	16.7	0.4	0.018	15.0	0.0	2.1	2	0	0	2	2	1	1	AAA	domain
AAA_25	PF13481.1	gi|15921411|ref|NP_377080.1|	-	0.0061	15.9	0.0	0.016	14.6	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
AAA_11	PF13086.1	gi|15921411|ref|NP_377080.1|	-	0.01	15.4	0.3	0.077	12.5	0.0	2.3	2	1	0	2	2	2	0	AAA	domain
AAA_10	PF12846.2	gi|15921411|ref|NP_377080.1|	-	0.012	15.1	2.1	0.046	13.1	0.0	2.8	4	0	0	4	4	4	0	AAA-like	domain
AAA_18	PF13238.1	gi|15921411|ref|NP_377080.1|	-	0.014	15.7	0.0	0.014	15.7	0.0	3.0	4	0	0	4	4	2	0	AAA	domain
DUF2312	PF10073.4	gi|15921411|ref|NP_377080.1|	-	0.018	14.4	0.4	0.018	14.4	0.3	2.7	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2312)
DUF2075	PF09848.4	gi|15921411|ref|NP_377080.1|	-	0.018	14.0	0.0	0.039	12.9	0.0	1.5	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
ATP-synt_ab	PF00006.20	gi|15921411|ref|NP_377080.1|	-	0.019	14.4	0.0	0.037	13.5	0.0	1.5	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
Parvo_NS1	PF01057.12	gi|15921411|ref|NP_377080.1|	-	0.06	12.2	0.0	0.13	11.1	0.0	1.5	1	0	0	1	1	1	0	Parvovirus	non-structural	protein	NS1
NACHT	PF05729.7	gi|15921411|ref|NP_377080.1|	-	0.072	12.7	0.0	0.18	11.4	0.0	1.6	1	0	0	1	1	1	0	NACHT	domain
T2SE	PF00437.15	gi|15921411|ref|NP_377080.1|	-	0.074	11.9	0.0	0.13	11.1	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_24	PF13479.1	gi|15921411|ref|NP_377080.1|	-	0.15	11.5	2.5	0.19	11.3	0.1	2.4	3	0	0	3	3	3	0	AAA	domain
7TMR-HDED	PF07697.6	gi|15921411|ref|NP_377080.1|	-	0.51	10.0	6.9	0.59	9.8	0.2	2.8	2	1	0	2	2	2	0	7TM-HD	extracellular
DDE_Tnp_IS1	PF03400.8	gi|15921412|ref|NP_377081.1|	-	7.1e-05	22.9	2.1	0.00011	22.3	1.5	1.3	1	0	0	1	1	1	1	IS1	transposase
Erythrovirus_X	PF06795.6	gi|15921412|ref|NP_377081.1|	-	0.04	13.9	0.1	0.072	13.1	0.1	1.4	1	0	0	1	1	1	0	Erythrovirus	X	protein
HTH_23	PF13384.1	gi|15921414|ref|NP_377083.1|	-	1.9e-08	33.7	0.0	2.6e-08	33.2	0.0	1.2	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.1	gi|15921414|ref|NP_377083.1|	-	3.2e-07	30.2	0.0	4.7e-07	29.6	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
Terminase_5	PF06056.7	gi|15921414|ref|NP_377083.1|	-	5e-07	29.1	0.0	6.5e-07	28.8	0.0	1.2	1	0	0	1	1	1	1	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_38	PF13936.1	gi|15921414|ref|NP_377083.1|	-	3.1e-06	26.6	0.0	4.6e-06	26.0	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|15921414|ref|NP_377083.1|	-	0.0001	21.6	0.0	0.00015	21.1	0.0	1.2	1	0	0	1	1	1	1	Sigma-70,	region	4
Zn_Tnp_IS1	PF03811.8	gi|15921414|ref|NP_377083.1|	-	0.0012	18.2	4.5	0.0012	18.2	3.1	1.9	2	0	0	2	2	2	1	InsA	N-terminal	domain
HTH_29	PF13551.1	gi|15921414|ref|NP_377083.1|	-	0.0012	18.9	0.0	0.0016	18.5	0.0	1.2	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_Tnp_1	PF01527.15	gi|15921414|ref|NP_377083.1|	-	0.0019	18.1	0.0	0.0028	17.5	0.0	1.2	1	0	0	1	1	1	1	Transposase
HTH_40	PF14493.1	gi|15921414|ref|NP_377083.1|	-	0.0077	16.4	0.0	0.011	15.9	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_Tnp_ISL3	PF13542.1	gi|15921414|ref|NP_377083.1|	-	0.013	14.6	0.0	0.021	14.0	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	transposase	family	ISL3
GerE	PF00196.14	gi|15921414|ref|NP_377083.1|	-	0.03	13.6	0.0	0.044	13.1	0.0	1.2	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
CENP-B_N	PF04218.8	gi|15921414|ref|NP_377083.1|	-	0.043	13.2	0.0	0.068	12.6	0.0	1.3	1	0	0	1	1	1	0	CENP-B	N-terminal	DNA-binding	domain
HTH_Tnp_IS630	PF01710.11	gi|15921414|ref|NP_377083.1|	-	0.062	12.9	0.0	0.081	12.6	0.0	1.1	1	0	0	1	1	1	0	Transposase
HTH_7	PF02796.10	gi|15921414|ref|NP_377083.1|	-	0.11	12.3	0.0	0.26	11.1	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	resolvase
HTH_Tnp_IS1	PF12759.2	gi|15921414|ref|NP_377083.1|	-	0.12	11.8	0.0	0.19	11.1	0.0	1.3	1	0	0	1	1	1	0	InsA	C-terminal	domain
Spore_IV_A	PF09547.5	gi|15921415|ref|NP_377084.1|	-	0.043	12.4	1.2	0.048	12.3	0.8	1.0	1	0	0	1	1	1	0	Stage	IV	sporulation	protein	A	(spore_IV_A)
LON	PF02190.11	gi|15921415|ref|NP_377084.1|	-	0.14	11.7	3.8	0.18	11.4	0.6	1.8	1	1	1	2	2	2	0	ATP-dependent	protease	La	(LON)	domain
Y1_Tnp	PF01797.11	gi|15921416|ref|NP_377085.1|	-	1.5e-43	147.4	0.1	1.7e-43	147.2	0.1	1.0	1	0	0	1	1	1	1	Transposase	IS200	like
GAD	PF02938.9	gi|15921416|ref|NP_377085.1|	-	0.059	13.5	0.4	6.5	6.9	0.0	2.1	2	0	0	2	2	2	0	GAD	domain
OrfB_IS605	PF01385.14	gi|15921418|ref|NP_377087.1|	-	7.8e-74	247.8	6.8	1.1e-73	247.4	4.7	1.2	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.6	gi|15921418|ref|NP_377087.1|	-	2.2e-18	65.6	0.0	5e-18	64.5	0.0	1.7	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
UPF0081	PF03652.10	gi|15921418|ref|NP_377087.1|	-	0.0045	17.0	0.0	0.0085	16.2	0.0	1.4	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0081)
HTH_24	PF13412.1	gi|15921419|ref|NP_377088.1|	-	1.4e-07	30.7	0.2	2.9e-07	29.7	0.2	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
DUF1887	PF09002.6	gi|15921419|ref|NP_377088.1|	-	0.00018	20.0	0.3	0.00019	19.9	0.2	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1887)
HTH_5	PF01022.15	gi|15921419|ref|NP_377088.1|	-	0.00043	19.8	0.0	0.00076	19.0	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
DUF2250	PF10007.4	gi|15921419|ref|NP_377088.1|	-	0.00093	19.0	0.1	0.0019	18.0	0.1	1.5	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
UBA	PF00627.26	gi|15921419|ref|NP_377088.1|	-	0.00093	18.9	0.1	14	5.6	0.0	3.4	3	0	0	3	3	3	0	UBA/TS-N	domain
HTH_11	PF08279.7	gi|15921419|ref|NP_377088.1|	-	0.0014	18.2	0.4	0.003	17.1	0.3	1.5	1	0	0	1	1	1	1	HTH	domain
HTH_27	PF13463.1	gi|15921419|ref|NP_377088.1|	-	0.0037	17.5	0.2	0.0066	16.7	0.1	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_45	PF14947.1	gi|15921419|ref|NP_377088.1|	-	0.0059	16.3	0.6	0.018	14.8	0.1	1.9	2	0	0	2	2	2	1	Winged	helix-turn-helix
FUR	PF01475.14	gi|15921419|ref|NP_377088.1|	-	0.0082	16.0	0.1	0.019	14.9	0.0	1.6	1	0	0	1	1	1	1	Ferric	uptake	regulator	family
ArsR	PF09824.4	gi|15921419|ref|NP_377088.1|	-	0.024	13.9	3.0	0.61	9.3	0.1	2.4	2	1	0	2	2	2	0	ArsR	transcriptional	regulator
MarR_2	PF12802.2	gi|15921419|ref|NP_377088.1|	-	0.026	14.1	0.0	0.044	13.4	0.0	1.3	1	0	0	1	1	1	0	MarR	family
HTH_20	PF12840.2	gi|15921419|ref|NP_377088.1|	-	0.028	14.2	0.0	0.059	13.1	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
MarR	PF01047.17	gi|15921419|ref|NP_377088.1|	-	0.032	13.9	0.3	0.055	13.1	0.2	1.4	1	0	0	1	1	1	0	MarR	family
SHOCT	PF09851.4	gi|15921419|ref|NP_377088.1|	-	0.058	12.8	1.0	0.058	12.8	0.7	1.7	2	0	0	2	2	2	0	Short	C-terminal	domain
DUF3764	PF12594.3	gi|15921419|ref|NP_377088.1|	-	0.082	12.6	0.0	0.16	11.7	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3764)
Toxin_YhaV	PF11663.3	gi|15921419|ref|NP_377088.1|	-	0.095	12.4	0.1	0.17	11.6	0.0	1.5	1	0	0	1	1	1	0	Toxin	with	endonuclease	activity	YhaV
DUF1107	PF06526.7	gi|15921420|ref|NP_377089.1|	-	0.0054	16.5	0.5	3.8	7.3	0.0	2.6	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF1107)
YebG	PF07130.7	gi|15921420|ref|NP_377089.1|	-	0.027	14.1	0.0	2.7	7.7	0.0	2.3	2	0	0	2	2	2	0	YebG	protein
DUF4434	PF14488.1	gi|15921420|ref|NP_377089.1|	-	0.073	12.8	0.0	0.26	11.0	0.0	1.9	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4434)
DUF2670	PF10875.3	gi|15921420|ref|NP_377089.1|	-	0.13	12.2	1.2	4	7.4	0.2	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2670)
CRISPR_Cas2	PF09827.4	gi|15921420|ref|NP_377089.1|	-	0.21	11.7	1.9	4.9	7.3	0.2	2.4	2	0	0	2	2	2	0	CRISPR	associated	protein	Cas2
HEPN	PF05168.9	gi|15921421|ref|NP_377090.1|	-	2.2e-09	37.2	3.3	2.7e-09	36.9	2.3	1.1	1	0	0	1	1	1	1	HEPN	domain
PaREP1	PF05942.6	gi|15921421|ref|NP_377090.1|	-	0.011	15.5	2.6	0.026	14.3	1.8	1.5	1	1	0	1	1	1	0	Archaeal	PaREP1/PaREP8	family
DUF155	PF02582.9	gi|15921421|ref|NP_377090.1|	-	0.1	12.5	0.4	0.14	12.0	0.3	1.4	1	1	0	1	1	1	0	Uncharacterised	ACR,	YagE	family	COG1723
CCP_MauG	PF03150.9	gi|15921421|ref|NP_377090.1|	-	0.14	12.4	0.1	0.16	12.2	0.1	1.2	1	0	0	1	1	1	0	Di-haem	cytochrome	c	peroxidase
PQQ_2	PF13360.1	gi|15921422|ref|NP_377091.1|	-	5.1e-27	94.8	0.1	6.7e-14	51.9	0.0	2.8	1	1	1	2	2	2	2	PQQ-like	domain
PQQ	PF01011.16	gi|15921422|ref|NP_377091.1|	-	2.8e-25	86.5	9.2	0.01	15.3	0.1	7.5	7	0	0	7	7	7	7	PQQ	enzyme	repeat
PQQ_3	PF13570.1	gi|15921422|ref|NP_377091.1|	-	2.4e-07	30.7	26.1	0.043	14.0	0.3	8.4	8	1	0	8	8	8	3	PQQ-like	domain
DDE_Tnp_IS240	PF13610.1	gi|15921423|ref|NP_377092.1|	-	1.2e-05	25.2	0.5	1.7e-05	24.8	0.3	1.2	1	0	0	1	1	1	1	DDE	domain
DDE_Tnp_IS66	PF03050.9	gi|15921423|ref|NP_377092.1|	-	0.00084	18.6	0.0	0.0014	17.8	0.0	1.3	1	1	0	1	1	1	1	Transposase	IS66	family
DNA_primase_S	PF01896.14	gi|15921423|ref|NP_377092.1|	-	0.016	15.0	0.1	0.023	14.5	0.1	1.4	1	0	0	1	1	1	0	Eukaryotic	and	archaeal	DNA	primase	small	subunit
DUF772	PF05598.6	gi|15921424|ref|NP_377093.1|	-	1.7e-05	24.5	0.1	4.4e-05	23.3	0.1	1.7	1	1	0	1	1	1	1	Transposase	domain	(DUF772)
DDE_Tnp_1	PF01609.16	gi|15921424|ref|NP_377093.1|	-	0.049	13.1	0.0	1.7	8.1	0.0	2.3	1	1	1	2	2	2	0	Transposase	DDE	domain
Peptidase_S41	PF03572.13	gi|15921425|ref|NP_377094.1|	-	2.4e-24	85.6	0.0	5.3e-24	84.5	0.0	1.6	1	0	0	1	1	1	1	Peptidase	family	S41
Tricorn_C1	PF14684.1	gi|15921425|ref|NP_377094.1|	-	2.8e-24	84.7	2.0	5.7e-24	83.7	1.4	1.5	1	0	0	1	1	1	1	Tricorn	protease	C1	domain
Tricorn_PDZ	PF14685.1	gi|15921425|ref|NP_377094.1|	-	1.2e-23	82.6	0.1	2.5e-23	81.6	0.1	1.6	1	0	0	1	1	1	1	Tricorn	protease	PDZ	domain
PD40	PF07676.7	gi|15921425|ref|NP_377094.1|	-	9.4e-10	37.9	3.2	6e-06	25.8	0.1	4.7	5	0	0	5	5	5	2	WD40-like	Beta	Propeller	Repeat
DUF4064	PF13273.1	gi|15921426|ref|NP_377095.1|	-	0.0009	19.3	9.1	0.0039	17.2	0.2	2.2	1	1	0	2	2	2	2	Protein	of	unknown	function	(DUF4064)
DUF2371	PF10177.4	gi|15921426|ref|NP_377095.1|	-	0.011	15.5	3.8	0.17	11.7	0.0	2.1	2	0	0	2	2	2	0	Uncharacterised	conserved	protein	(DUF2371)
DUF3592	PF12158.3	gi|15921426|ref|NP_377095.1|	-	0.1	12.4	2.0	1.4	8.6	1.4	2.1	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3592)
DUF1469	PF07332.6	gi|15921426|ref|NP_377095.1|	-	0.23	11.2	3.6	0.61	9.8	0.1	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1469)
TrbC	PF04956.8	gi|15921426|ref|NP_377095.1|	-	9.9	6.2	11.0	3.3	7.7	2.9	2.4	2	0	0	2	2	2	0	TrbC/VIRB2	family
Sugar_tr	PF00083.19	gi|15921427|ref|NP_377096.1|	-	2.5e-36	125.2	24.2	2.9e-36	125.0	16.8	1.1	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|15921427|ref|NP_377096.1|	-	2.7e-29	101.9	49.1	2e-27	95.8	20.3	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Rieske	PF00355.21	gi|15921428|ref|NP_377097.1|	-	1.8e-09	37.0	0.0	2.1e-09	36.8	0.0	1.1	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Rieske_2	PF13806.1	gi|15921428|ref|NP_377097.1|	-	0.096	12.4	0.0	0.11	12.1	0.0	1.2	1	0	0	1	1	1	0	Rieske-like	[2Fe-2S]	domain
AAA-ATPase_like	PF09820.4	gi|15921429|ref|NP_377098.1|	-	0.033	13.3	0.5	0.054	12.6	0.3	1.3	1	0	0	1	1	1	0	Predicted	AAA-ATPase
HeLo	PF14479.1	gi|15921429|ref|NP_377098.1|	-	0.069	12.8	0.4	0.18	11.5	0.1	1.8	1	1	0	2	2	2	0	Prion-inhibition	and	propagation
FLO_LFY	PF01698.11	gi|15921429|ref|NP_377098.1|	-	0.091	11.5	0.1	0.12	11.2	0.1	1.1	1	0	0	1	1	1	0	Floricaula	/	Leafy	protein
Phage_P2_GpE	PF06528.7	gi|15921429|ref|NP_377098.1|	-	0.13	11.7	0.1	0.22	10.9	0.1	1.3	1	0	0	1	1	1	0	Phage	P2	GpE
Hemerythrin	PF01814.18	gi|15921430|ref|NP_377099.1|	-	2.3e-12	47.2	1.9	3.1e-12	46.8	1.3	1.1	1	0	0	1	1	1	1	Hemerythrin	HHE	cation	binding	domain
Latarcin	PF10279.4	gi|15921430|ref|NP_377099.1|	-	0.013	15.6	0.5	0.46	10.7	0.0	2.2	2	0	0	2	2	2	0	Latarcin	precursor
DUF4363	PF14276.1	gi|15921430|ref|NP_377099.1|	-	0.075	12.7	0.2	0.35	10.5	0.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4363)
InvH	PF04741.7	gi|15921430|ref|NP_377099.1|	-	0.08	12.7	0.2	0.21	11.4	0.1	1.6	1	1	1	2	2	2	0	InvH	outer	membrane	lipoprotein
Rnk_N	PF14760.1	gi|15921430|ref|NP_377099.1|	-	0.086	12.9	1.5	0.28	11.2	1.0	1.9	1	1	0	1	1	1	0	Rnk	N-terminus
TPR_8	PF13181.1	gi|15921430|ref|NP_377099.1|	-	0.16	11.7	0.4	0.49	10.2	0.1	1.9	2	0	0	2	2	2	0	Tetratricopeptide	repeat
DUF1533	PF07550.6	gi|15921431|ref|NP_377100.1|	-	0.0097	15.8	2.0	0.17	11.8	0.4	2.8	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF1533)
Fer4	PF00037.22	gi|15921432|ref|NP_377101.1|	-	2.2e-13	49.1	15.7	2.8e-07	29.8	4.5	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|15921432|ref|NP_377101.1|	-	5.2e-11	42.6	7.2	6.9e-11	42.2	5.0	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|15921432|ref|NP_377101.1|	-	5e-09	35.8	19.3	8.3e-07	28.7	5.8	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|15921432|ref|NP_377101.1|	-	5.4e-09	36.2	8.6	8.9e-09	35.6	6.0	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|15921432|ref|NP_377101.1|	-	3.8e-08	32.8	15.9	1.2e-05	24.8	4.2	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|15921432|ref|NP_377101.1|	-	1.2e-07	31.4	5.8	1.6e-07	31.0	4.0	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|15921432|ref|NP_377101.1|	-	4.8e-07	29.7	4.8	1.5e-06	28.0	3.7	1.5	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|15921432|ref|NP_377101.1|	-	9.7e-07	28.3	12.6	0.003	17.3	2.9	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|15921432|ref|NP_377101.1|	-	2.5e-06	27.3	8.5	0.017	15.4	2.3	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|15921432|ref|NP_377101.1|	-	5.9e-05	23.3	15.6	0.0077	16.7	4.6	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_13	PF13370.1	gi|15921432|ref|NP_377101.1|	-	7.6e-05	23.0	9.7	0.023	15.0	0.3	2.3	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_17	PF13534.1	gi|15921432|ref|NP_377101.1|	-	0.00012	22.3	0.9	0.3	11.4	0.3	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|15921432|ref|NP_377101.1|	-	0.00015	22.0	8.6	0.0027	18.0	0.7	2.3	2	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|15921432|ref|NP_377101.1|	-	0.00037	21.1	8.3	0.0066	17.1	1.6	2.3	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_15	PF13459.1	gi|15921432|ref|NP_377101.1|	-	0.00043	20.7	10.1	0.21	12.1	0.2	2.4	2	1	0	2	2	2	2	4Fe-4S	single	cluster	domain
DEDD_Tnp_IS110	PF01548.12	gi|15921433|ref|NP_377102.1|	-	2.7e-09	36.8	0.0	3.5e-09	36.4	0.0	1.1	1	0	0	1	1	1	1	Transposase
Transposase_20	PF02371.11	gi|15921434|ref|NP_377103.1|	-	8.5e-27	93.0	0.1	1.7e-26	92.1	0.0	1.5	2	0	0	2	2	2	1	Transposase	IS116/IS110/IS902	family
ICMT	PF04140.9	gi|15921450|ref|NP_377119.1|	-	1.1e-13	51.1	0.3	2e-13	50.3	0.2	1.4	1	0	0	1	1	1	1	Isoprenylcysteine	carboxyl	methyltransferase	(ICMT)	family
PEMT	PF04191.8	gi|15921450|ref|NP_377119.1|	-	2.1e-12	47.0	1.4	2.1e-12	47.0	1.0	1.7	2	0	0	2	2	2	1	Phospholipid	methyltransferase
ERG4_ERG24	PF01222.12	gi|15921450|ref|NP_377119.1|	-	0.0029	16.2	0.1	0.0029	16.2	0.1	1.9	2	1	0	2	2	2	1	Ergosterol	biosynthesis	ERG4/ERG24	family
Serinc	PF03348.10	gi|15921450|ref|NP_377119.1|	-	0.42	9.2	4.0	0.57	8.8	2.8	1.1	1	0	0	1	1	1	0	Serine	incorporator	(Serinc)
DnaI_N	PF07319.6	gi|15921451|ref|NP_377120.1|	-	0.076	13.2	3.1	0.14	12.4	1.9	1.9	1	1	1	2	2	2	0	Primosomal	protein	DnaI	N-terminus
CppA_C	PF14507.1	gi|15921451|ref|NP_377120.1|	-	0.096	12.8	2.5	0.12	12.5	1.0	1.7	1	1	1	2	2	2	0	CppA	C-terminal
AAA_21	PF13304.1	gi|15921452|ref|NP_377121.1|	-	4.9e-08	33.2	25.3	9.2e-05	22.5	5.6	3.2	2	1	1	3	3	3	2	AAA	domain
AAA_23	PF13476.1	gi|15921452|ref|NP_377121.1|	-	1e-07	32.4	6.5	1.2e-06	29.0	4.5	2.3	1	1	0	1	1	1	1	AAA	domain
MMR_HSR1	PF01926.18	gi|15921452|ref|NP_377121.1|	-	0.0021	17.9	0.1	0.0065	16.4	0.0	1.9	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
AAA_25	PF13481.1	gi|15921452|ref|NP_377121.1|	-	0.015	14.6	0.0	0.085	12.2	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
AAA_29	PF13555.1	gi|15921452|ref|NP_377121.1|	-	0.021	14.3	0.0	0.046	13.2	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
ABC_tran	PF00005.22	gi|15921452|ref|NP_377121.1|	-	0.061	13.6	0.0	0.17	12.1	0.0	1.7	1	0	0	1	1	1	0	ABC	transporter
AAA_17	PF13207.1	gi|15921452|ref|NP_377121.1|	-	0.07	13.9	0.1	0.5	11.2	0.0	2.4	2	1	0	2	2	2	0	AAA	domain
AAA_33	PF13671.1	gi|15921452|ref|NP_377121.1|	-	0.083	12.7	0.0	0.15	11.9	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_16	PF13191.1	gi|15921452|ref|NP_377121.1|	-	0.085	12.8	0.0	3.6	7.5	0.0	2.3	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_22	PF13401.1	gi|15921452|ref|NP_377121.1|	-	0.13	12.4	0.2	0.98	9.5	0.0	2.4	3	0	0	3	3	3	0	AAA	domain
AMP-binding	PF00501.23	gi|15921453|ref|NP_377122.1|	-	4e-77	259.3	0.0	5.3e-77	258.9	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|15921453|ref|NP_377122.1|	-	1.1e-15	58.3	0.2	2.5e-15	57.1	0.2	1.6	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
DUF1310	PF07006.6	gi|15921453|ref|NP_377122.1|	-	0.026	14.0	0.0	0.055	12.9	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1310)
BPL_LplA_LipB	PF03099.14	gi|15921456|ref|NP_377125.1|	-	2e-13	50.4	0.0	2.9e-13	49.9	0.0	1.2	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
Radical_SAM	PF04055.16	gi|15921457|ref|NP_377126.1|	-	5.8e-10	39.5	1.8	5.8e-10	39.5	1.3	2.1	2	1	0	2	2	2	1	Radical	SAM	superfamily
zf-C2HC5	PF06221.8	gi|15921457|ref|NP_377126.1|	-	0.021	14.5	0.5	2.7	7.8	0.1	2.4	2	0	0	2	2	2	0	Putative	zinc	finger	motif,	C2HC5-type
Radical_SAM	PF04055.16	gi|15921458|ref|NP_377127.1|	-	0.015	15.5	0.5	0.026	14.7	0.4	1.4	1	0	0	1	1	1	0	Radical	SAM	superfamily
FAD_binding_2	PF00890.19	gi|15921459|ref|NP_377128.1|	-	7.1e-70	235.9	0.0	8.6e-70	235.6	0.0	1.0	1	0	0	1	1	1	1	FAD	binding	domain
Succ_DH_flav_C	PF02910.15	gi|15921459|ref|NP_377128.1|	-	4.4e-13	49.2	0.0	4.5e-09	36.2	0.0	2.4	1	1	1	2	2	2	2	Fumarate	reductase	flavoprotein	C-term
DAO	PF01266.19	gi|15921459|ref|NP_377128.1|	-	1.4e-11	43.9	2.6	3.9e-10	39.1	1.8	2.2	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.9	gi|15921459|ref|NP_377128.1|	-	1.7e-11	44.4	1.2	5.4e-10	39.4	0.8	2.8	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|15921459|ref|NP_377128.1|	-	2.2e-07	30.1	1.4	0.0048	15.8	0.3	2.4	2	0	0	2	2	2	2	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.9	gi|15921459|ref|NP_377128.1|	-	7.1e-06	24.7	3.3	0.0058	15.1	0.0	2.6	3	0	0	3	3	3	2	HI0933-like	protein
NAD_binding_8	PF13450.1	gi|15921459|ref|NP_377128.1|	-	1.5e-05	24.9	2.2	3.3e-05	23.8	0.3	2.4	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox	PF00070.22	gi|15921459|ref|NP_377128.1|	-	0.00032	21.0	1.3	0.015	15.6	0.1	2.7	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|15921459|ref|NP_377128.1|	-	0.001	18.2	1.9	0.0015	17.6	1.3	1.2	1	0	0	1	1	1	1	FAD	binding	domain
Trp_halogenase	PF04820.9	gi|15921459|ref|NP_377128.1|	-	0.0027	16.3	1.6	0.25	9.9	0.0	2.1	2	0	0	2	2	2	2	Tryptophan	halogenase
FAD_oxidored	PF12831.2	gi|15921459|ref|NP_377128.1|	-	0.0076	15.3	1.5	0.015	14.3	1.0	1.5	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
Pyr_redox_3	PF13738.1	gi|15921459|ref|NP_377128.1|	-	0.008	16.2	0.3	1.9	8.5	0.0	2.3	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
ApbA	PF02558.11	gi|15921459|ref|NP_377128.1|	-	0.047	13.1	1.0	0.1	12.0	0.7	1.6	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
NAD_binding_9	PF13454.1	gi|15921459|ref|NP_377128.1|	-	0.13	12.0	0.6	4.7	6.9	0.0	2.6	2	0	0	2	2	2	0	FAD-NAD(P)-binding
Strep_67kDa_ant	PF06100.6	gi|15921459|ref|NP_377128.1|	-	0.14	10.4	0.5	0.23	9.7	0.3	1.3	1	0	0	1	1	1	0	Streptococcal	67	kDa	myosin-cross-reactive	antigen	like	family
NadA	PF02445.11	gi|15921460|ref|NP_377129.1|	-	3.9e-106	354.1	0.2	4.4e-106	354.0	0.1	1.0	1	0	0	1	1	1	1	Quinolinate	synthetase	A	protein
NEP	PF10167.4	gi|15921460|ref|NP_377129.1|	-	0.026	14.2	0.3	0.15	11.7	0.0	2.3	3	0	0	3	3	3	0	Uncharacterised	conserved	protein
ADH_zinc_N	PF00107.21	gi|15921460|ref|NP_377129.1|	-	0.11	12.1	0.0	7	6.2	0.0	2.3	2	0	0	2	2	2	0	Zinc-binding	dehydrogenase
QRPTase_C	PF01729.14	gi|15921461|ref|NP_377130.1|	-	8.7e-62	207.5	0.1	1.1e-61	207.2	0.1	1.1	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
QRPTase_N	PF02749.11	gi|15921461|ref|NP_377130.1|	-	6.8e-21	73.8	0.0	1.4e-20	72.9	0.0	1.5	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
Ribul_P_3_epim	PF00834.14	gi|15921461|ref|NP_377130.1|	-	0.02	13.9	1.0	0.19	10.7	0.1	2.7	2	1	1	3	3	3	0	Ribulose-phosphate	3	epimerase	family
TMP-TENI	PF02581.12	gi|15921461|ref|NP_377130.1|	-	0.026	13.6	0.7	0.57	9.2	0.5	2.2	1	1	0	1	1	1	0	Thiamine	monophosphate	synthase/TENI
UPF0051	PF01458.12	gi|15921462|ref|NP_377131.1|	-	2.9e-44	151.2	0.4	4e-44	150.7	0.3	1.2	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
UPF0051	PF01458.12	gi|15921463|ref|NP_377132.1|	-	1.2e-59	201.6	0.2	2e-59	200.8	0.0	1.5	2	0	0	2	2	2	1	Uncharacterized	protein	family	(UPF0051)
ABC_tran	PF00005.22	gi|15921464|ref|NP_377133.1|	-	1.2e-23	83.9	0.1	1.7e-23	83.4	0.1	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|15921464|ref|NP_377133.1|	-	3e-12	47.1	0.2	2.7e-11	43.9	0.1	1.9	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|15921464|ref|NP_377133.1|	-	6.5e-07	28.7	0.3	3.7e-06	26.3	0.2	1.9	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
MutS_V	PF00488.16	gi|15921464|ref|NP_377133.1|	-	0.0047	16.3	0.1	0.43	9.9	0.0	2.2	2	0	0	2	2	2	1	MutS	domain	V
DUF258	PF03193.11	gi|15921464|ref|NP_377133.1|	-	0.0078	15.4	0.1	0.013	14.7	0.1	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_23	PF13476.1	gi|15921464|ref|NP_377133.1|	-	0.0098	16.2	0.7	0.015	15.6	0.4	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_25	PF13481.1	gi|15921464|ref|NP_377133.1|	-	0.01	15.2	0.0	0.039	13.3	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
AAA_29	PF13555.1	gi|15921464|ref|NP_377133.1|	-	0.012	15.1	0.2	0.025	14.0	0.1	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_13	PF13166.1	gi|15921464|ref|NP_377133.1|	-	0.022	13.2	0.2	0.1	11.0	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
AAA	PF00004.24	gi|15921464|ref|NP_377133.1|	-	0.032	14.4	0.2	0.12	12.5	0.1	2.0	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Arch_ATPase	PF01637.13	gi|15921464|ref|NP_377133.1|	-	0.045	13.4	0.1	0.065	12.9	0.1	1.3	1	0	0	1	1	1	0	Archaeal	ATPase
AAA_22	PF13401.1	gi|15921464|ref|NP_377133.1|	-	0.13	12.4	0.3	0.63	10.1	0.2	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_15	PF13175.1	gi|15921464|ref|NP_377133.1|	-	0.14	11.1	1.3	0.42	9.5	0.6	1.8	2	0	0	2	2	2	0	AAA	ATPase	domain
MutS_III	PF05192.13	gi|15921465|ref|NP_377134.1|	-	0.12	12.1	3.8	0.14	11.9	2.0	1.7	1	1	1	2	2	2	0	MutS	domain	III
HSP20	PF00011.16	gi|15921466|ref|NP_377135.1|	-	0.0012	18.6	0.0	0.016	15.0	0.0	2.2	1	1	0	1	1	1	1	Hsp20/alpha	crystallin	family
CS	PF04969.11	gi|15921466|ref|NP_377135.1|	-	0.0043	17.5	0.0	0.0074	16.8	0.0	1.4	1	0	0	1	1	1	1	CS	domain
HSBP1	PF06825.7	gi|15921466|ref|NP_377135.1|	-	0.039	13.5	0.2	0.06	12.9	0.1	1.3	1	0	0	1	1	1	0	Heat	shock	factor	binding	protein	1
PTPlike_phytase	PF14566.1	gi|15921466|ref|NP_377135.1|	-	0.098	12.7	0.0	0.1	12.6	0.0	1.2	1	0	0	1	1	1	0	Inositol	hexakisphosphate
PAC2	PF09754.4	gi|15921467|ref|NP_377136.1|	-	5.1e-40	137.6	0.1	6.5e-40	137.3	0.1	1.1	1	0	0	1	1	1	1	PAC2	family
GCV_H	PF01597.14	gi|15921468|ref|NP_377137.1|	-	1.9e-45	153.4	1.3	2.2e-45	153.2	0.9	1.0	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
Biotin_lipoyl	PF00364.17	gi|15921468|ref|NP_377137.1|	-	0.00034	20.1	0.3	0.00059	19.4	0.2	1.3	1	0	0	1	1	1	1	Biotin-requiring	enzyme
Tim44	PF04280.10	gi|15921468|ref|NP_377137.1|	-	0.028	14.4	0.2	2.3	8.1	0.0	2.1	2	0	0	2	2	2	0	Tim44-like	domain
RnfC_N	PF13375.1	gi|15921468|ref|NP_377137.1|	-	0.13	11.9	0.1	0.41	10.3	0.0	1.8	2	0	0	2	2	2	0	RnfC	Barrel	sandwich	hybrid	domain
GCV_T	PF01571.16	gi|15921469|ref|NP_377138.1|	-	2.7e-46	157.6	0.0	3.4e-46	157.2	0.0	1.1	1	0	0	1	1	1	1	Aminomethyltransferase	folate-binding	domain
GCV_T_C	PF08669.6	gi|15921469|ref|NP_377138.1|	-	1e-18	67.0	0.0	1.6e-18	66.4	0.0	1.3	1	0	0	1	1	1	1	Glycine	cleavage	T-protein	C-terminal	barrel	domain
GDC-P	PF02347.11	gi|15921470|ref|NP_377139.1|	-	2.7e-127	425.0	0.0	3.2e-127	424.7	0.0	1.0	1	0	0	1	1	1	1	Glycine	cleavage	system	P-protein
Beta_elim_lyase	PF01212.16	gi|15921470|ref|NP_377139.1|	-	8.5e-05	21.8	0.0	0.00013	21.2	0.0	1.3	1	1	0	1	1	1	1	Beta-eliminating	lyase
Aminotran_5	PF00266.14	gi|15921470|ref|NP_377139.1|	-	9.1e-05	21.3	0.1	0.00027	19.7	0.0	1.7	2	0	0	2	2	2	1	Aminotransferase	class-V
Aminotran_1_2	PF00155.16	gi|15921470|ref|NP_377139.1|	-	0.0046	15.9	0.1	0.01	14.7	0.0	1.6	2	0	0	2	2	2	1	Aminotransferase	class	I	and	II
GDC-P	PF02347.11	gi|15921471|ref|NP_377140.1|	-	1.6e-14	53.4	0.0	8e-13	47.8	0.0	2.1	2	0	0	2	2	2	2	Glycine	cleavage	system	P-protein
Aminotran_5	PF00266.14	gi|15921471|ref|NP_377140.1|	-	9.5e-07	27.8	0.0	2.4e-06	26.5	0.0	1.5	1	1	0	1	1	1	1	Aminotransferase	class-V
Peptidase_S24	PF00717.18	gi|15921472|ref|NP_377141.1|	-	0.0089	15.6	0.1	0.014	14.9	0.1	1.5	1	1	0	1	1	1	1	Peptidase	S24-like
Cren7	PF11520.3	gi|15921473|ref|NP_377142.1|	-	3.4e-06	26.5	1.1	2.1e-05	24.0	0.1	2.3	2	1	0	2	2	2	1	Chromatin	protein	Cren7
Zn-ribbon_8	PF09723.5	gi|15921473|ref|NP_377142.1|	-	0.071	13.0	0.6	0.23	11.4	0.2	1.9	2	0	0	2	2	2	0	Zinc	ribbon	domain
DUF1610	PF07754.6	gi|15921473|ref|NP_377142.1|	-	0.4	10.8	4.0	0.63	10.2	0.3	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
DNA_ligase_ZBD	PF03119.11	gi|15921473|ref|NP_377142.1|	-	0.51	10.0	3.0	0.83	9.4	0.4	2.4	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
FYDLN_acid	PF09538.5	gi|15921473|ref|NP_377142.1|	-	0.66	10.5	4.0	3.2	8.3	2.8	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(FYDLN_acid)
COX2_TM	PF02790.10	gi|15921474|ref|NP_377143.1|	-	0.15	11.9	0.2	0.15	11.9	0.1	2.3	1	1	0	2	2	2	0	Cytochrome	C	oxidase	subunit	II,	transmembrane	domain
DUF373	PF04123.8	gi|15921474|ref|NP_377143.1|	-	1.3	7.9	4.5	1.5	7.8	3.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF373)
Enolase_C	PF00113.17	gi|15921475|ref|NP_377144.1|	-	1.4e-95	319.6	0.1	2.2e-95	319.0	0.1	1.3	1	0	0	1	1	1	1	Enolase,	C-terminal	TIM	barrel	domain
Enolase_N	PF03952.11	gi|15921475|ref|NP_377144.1|	-	3.8e-42	143.3	0.4	6.3e-42	142.6	0.3	1.4	1	0	0	1	1	1	1	Enolase,	N-terminal	domain
CW_binding_2	PF04122.7	gi|15921475|ref|NP_377144.1|	-	0.022	14.9	0.5	8.6	6.6	0.1	2.6	2	0	0	2	2	2	0	Putative	cell	wall	binding	repeat	2
DUF724	PF05266.9	gi|15921476|ref|NP_377145.1|	-	0.0015	18.2	3.4	0.0026	17.3	1.7	1.7	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF724)
Herpes_UL25	PF01499.11	gi|15921476|ref|NP_377145.1|	-	0.0031	15.8	0.8	0.0034	15.7	0.6	1.1	1	0	0	1	1	1	1	Herpesvirus	UL25	family
PRC	PF05239.11	gi|15921476|ref|NP_377145.1|	-	0.042	13.7	2.1	0.073	12.9	1.4	1.3	1	0	0	1	1	1	0	PRC-barrel	domain
Nairo_nucleo	PF02477.10	gi|15921476|ref|NP_377145.1|	-	0.046	12.4	0.2	0.062	11.9	0.1	1.1	1	0	0	1	1	1	0	Nucleocapsid	N	protein
DUF342	PF03961.8	gi|15921476|ref|NP_377145.1|	-	0.064	11.6	8.7	0.093	11.1	6.0	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
Syntaxin	PF00804.20	gi|15921476|ref|NP_377145.1|	-	0.11	12.6	9.8	0.082	13.0	4.4	2.0	1	1	1	2	2	2	0	Syntaxin
Laminin_I	PF06008.9	gi|15921476|ref|NP_377145.1|	-	0.18	11.1	8.2	0.13	11.5	2.9	2.0	2	0	0	2	2	2	0	Laminin	Domain	I
DUF904	PF06005.7	gi|15921476|ref|NP_377145.1|	-	0.39	11.0	9.5	0.3	11.4	4.6	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF904)
Syntaxin-6_N	PF09177.6	gi|15921476|ref|NP_377145.1|	-	0.51	10.7	4.0	2.8	8.4	2.8	2.2	1	1	0	1	1	1	0	Syntaxin	6,	N-terminal
BLOC1_2	PF10046.4	gi|15921476|ref|NP_377145.1|	-	0.84	9.8	7.5	0.22	11.7	1.3	2.4	2	0	0	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
FliT	PF05400.8	gi|15921476|ref|NP_377145.1|	-	0.89	10.0	9.3	0.43	11.0	4.7	1.7	2	0	0	2	2	2	0	Flagellar	protein	FliT
YlqD	PF11068.3	gi|15921476|ref|NP_377145.1|	-	0.98	9.4	6.1	0.93	9.5	3.4	1.6	1	1	1	2	2	2	0	YlqD	protein
DUF883	PF05957.8	gi|15921476|ref|NP_377145.1|	-	0.99	9.8	3.8	0.57	10.6	1.1	1.6	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF883)
IncA	PF04156.9	gi|15921476|ref|NP_377145.1|	-	5.7	6.4	12.1	1.6	8.2	6.0	1.6	1	1	0	2	2	2	0	IncA	protein
Snf7	PF03357.16	gi|15921477|ref|NP_377146.1|	-	9.2e-09	34.9	3.0	9.2e-09	34.9	2.0	2.0	2	0	0	2	2	2	1	Snf7
Baculo_PEP_C	PF04513.7	gi|15921477|ref|NP_377146.1|	-	0.00045	20.0	0.8	0.23	11.2	0.1	2.5	1	1	1	2	2	2	2	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
TMP_2	PF06791.8	gi|15921477|ref|NP_377146.1|	-	0.0057	16.3	0.3	0.018	14.6	0.1	1.9	1	1	0	1	1	1	1	Prophage	tail	length	tape	measure	protein
TrmB	PF01978.14	gi|15921477|ref|NP_377146.1|	-	0.071	12.8	0.2	0.38	10.4	0.0	2.3	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_40	PF14493.1	gi|15921477|ref|NP_377146.1|	-	0.18	12.0	0.2	0.18	12.0	0.1	3.2	3	1	0	3	3	3	0	Helix-turn-helix	domain
Terminase_2	PF03592.11	gi|15921477|ref|NP_377146.1|	-	1.1	9.5	6.9	5.8	7.1	0.1	2.9	3	0	0	3	3	3	0	Terminase	small	subunit
Med4	PF10018.4	gi|15921477|ref|NP_377146.1|	-	1.8	7.9	6.6	0.44	9.9	0.6	2.2	2	0	0	2	2	2	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
AAA	PF00004.24	gi|15921478|ref|NP_377147.1|	-	8.3e-41	139.2	0.0	6.3e-40	136.4	0.0	2.2	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
MIT	PF04212.13	gi|15921478|ref|NP_377147.1|	-	1.6e-16	59.9	4.0	1.6e-16	59.9	2.8	2.0	2	0	0	2	2	1	1	MIT	(microtubule	interacting	and	transport)	domain
Vps4_C	PF09336.5	gi|15921478|ref|NP_377147.1|	-	7.5e-08	32.1	0.8	1.1e-06	28.4	0.0	2.6	3	0	0	3	3	2	1	Vps4	C	terminal	oligomerisation	domain
AAA_14	PF13173.1	gi|15921478|ref|NP_377147.1|	-	3.1e-07	30.3	0.0	8.6e-07	28.9	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
RuvB_N	PF05496.7	gi|15921478|ref|NP_377147.1|	-	3.7e-07	29.4	0.0	4.4e-06	25.9	0.0	2.3	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_2	PF07724.9	gi|15921478|ref|NP_377147.1|	-	4.8e-07	29.8	0.3	1.2e-06	28.5	0.0	1.8	2	0	0	2	2	1	1	AAA	domain	(Cdc48	subfamily)
AAA_16	PF13191.1	gi|15921478|ref|NP_377147.1|	-	8.3e-07	29.1	0.0	0.0015	18.5	0.0	3.1	1	1	2	3	3	3	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|15921478|ref|NP_377147.1|	-	2.7e-06	27.5	0.0	1.5e-05	25.1	0.0	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_25	PF13481.1	gi|15921478|ref|NP_377147.1|	-	5.4e-06	25.9	0.2	0.012	15.0	0.1	2.4	1	1	1	2	2	2	2	AAA	domain
AAA_5	PF07728.9	gi|15921478|ref|NP_377147.1|	-	1.9e-05	24.4	0.4	0.00081	19.1	0.1	3.1	2	1	0	2	2	1	1	AAA	domain	(dynein-related	subfamily)
AAA_17	PF13207.1	gi|15921478|ref|NP_377147.1|	-	5.6e-05	23.9	0.4	0.00023	21.9	0.1	2.2	2	1	0	2	2	1	1	AAA	domain
TIP49	PF06068.8	gi|15921478|ref|NP_377147.1|	-	7e-05	21.7	1.1	9.8e-05	21.2	0.0	1.7	2	0	0	2	2	2	1	TIP49	C-terminus
Zeta_toxin	PF06414.7	gi|15921478|ref|NP_377147.1|	-	0.00042	19.4	0.0	0.0011	18.0	0.0	1.8	1	0	0	1	1	1	1	Zeta	toxin
ResIII	PF04851.10	gi|15921478|ref|NP_377147.1|	-	0.00054	19.8	0.0	0.051	13.4	0.0	2.4	1	1	1	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Arch_ATPase	PF01637.13	gi|15921478|ref|NP_377147.1|	-	0.0011	18.7	8.7	0.049	13.3	0.5	3.5	2	1	2	4	4	4	2	Archaeal	ATPase
TPR_6	PF13174.1	gi|15921478|ref|NP_377147.1|	-	0.0014	18.9	0.5	0.011	16.1	0.1	2.7	2	0	0	2	2	2	1	Tetratricopeptide	repeat
Mg_chelatase	PF01078.16	gi|15921478|ref|NP_377147.1|	-	0.0019	17.4	0.0	0.0045	16.1	0.0	1.6	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
RNA_helicase	PF00910.17	gi|15921478|ref|NP_377147.1|	-	0.0026	17.9	0.1	0.017	15.2	0.0	2.4	3	0	0	3	3	2	1	RNA	helicase
AAA_10	PF12846.2	gi|15921478|ref|NP_377147.1|	-	0.0031	17.0	0.3	1.8	7.9	0.0	3.3	4	0	0	4	4	4	1	AAA-like	domain
TPR_11	PF13414.1	gi|15921478|ref|NP_377147.1|	-	0.0033	17.0	0.8	0.012	15.2	0.6	2.0	1	1	0	1	1	1	1	TPR	repeat
AAA_18	PF13238.1	gi|15921478|ref|NP_377147.1|	-	0.0048	17.2	0.5	0.015	15.5	0.0	2.3	2	1	0	2	2	1	1	AAA	domain
AAA_24	PF13479.1	gi|15921478|ref|NP_377147.1|	-	0.0053	16.3	2.0	0.038	13.5	0.0	2.9	3	0	0	3	3	3	1	AAA	domain
IstB_IS21	PF01695.12	gi|15921478|ref|NP_377147.1|	-	0.0086	15.5	0.0	0.016	14.6	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
ABC_tran	PF00005.22	gi|15921478|ref|NP_377147.1|	-	0.0087	16.3	0.1	0.087	13.1	0.0	2.3	2	1	0	2	2	2	1	ABC	transporter
Sigma54_activat	PF00158.21	gi|15921478|ref|NP_377147.1|	-	0.0093	15.4	0.0	0.24	10.8	0.0	2.3	2	0	0	2	2	2	1	Sigma-54	interaction	domain
NACHT	PF05729.7	gi|15921478|ref|NP_377147.1|	-	0.012	15.2	0.0	0.057	13.0	0.0	2.0	1	1	1	2	2	2	0	NACHT	domain
AAA_33	PF13671.1	gi|15921478|ref|NP_377147.1|	-	0.016	15.0	0.0	0.035	13.9	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
SKI	PF01202.17	gi|15921478|ref|NP_377147.1|	-	0.019	14.8	0.1	0.072	12.9	0.0	2.0	2	0	0	2	2	2	0	Shikimate	kinase
AAA_19	PF13245.1	gi|15921478|ref|NP_377147.1|	-	0.019	14.6	0.0	0.039	13.7	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
DUF815	PF05673.8	gi|15921478|ref|NP_377147.1|	-	0.026	13.4	0.0	0.058	12.3	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
ATP-synt_ab	PF00006.20	gi|15921478|ref|NP_377147.1|	-	0.031	13.7	0.0	0.057	12.9	0.0	1.4	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
Parvo_NS1	PF01057.12	gi|15921478|ref|NP_377147.1|	-	0.043	12.6	0.0	0.091	11.6	0.0	1.4	1	0	0	1	1	1	0	Parvovirus	non-structural	protein	NS1
Glutaredoxin2_C	PF04399.8	gi|15921478|ref|NP_377147.1|	-	0.056	13.0	1.7	8.2	6.0	0.0	3.3	2	1	0	3	3	3	0	Glutaredoxin	2,	C	terminal	domain
AAA_28	PF13521.1	gi|15921478|ref|NP_377147.1|	-	0.06	13.3	0.0	0.13	12.2	0.0	1.8	1	1	0	1	1	1	0	AAA	domain
DASH_Dad4	PF08650.5	gi|15921478|ref|NP_377147.1|	-	0.085	12.7	0.5	17	5.3	0.0	3.1	2	1	1	3	3	3	0	DASH	complex	subunit	Dad4
TPR_19	PF14559.1	gi|15921478|ref|NP_377147.1|	-	0.089	13.1	0.0	0.31	11.4	0.0	2.0	1	0	0	1	1	1	0	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|15921478|ref|NP_377147.1|	-	0.097	12.3	0.4	0.33	10.6	0.3	2.0	1	0	0	1	1	1	0	Tetratricopeptide	repeat
AAA_3	PF07726.6	gi|15921478|ref|NP_377147.1|	-	0.12	11.9	0.0	0.28	10.8	0.0	1.6	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sigma54_activ_2	PF14532.1	gi|15921478|ref|NP_377147.1|	-	0.13	12.2	0.0	0.26	11.3	0.0	1.6	1	1	0	1	1	1	0	Sigma-54	interaction	domain
TPR_14	PF13428.1	gi|15921478|ref|NP_377147.1|	-	0.14	12.8	0.0	0.78	10.5	0.0	2.3	1	1	0	1	1	1	0	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|15921478|ref|NP_377147.1|	-	0.19	11.7	1.0	0.44	10.5	0.1	2.2	2	0	0	2	2	1	0	Tetratricopeptide	repeat
Viral_helicase1	PF01443.13	gi|15921478|ref|NP_377147.1|	-	0.19	11.2	0.0	0.38	10.2	0.0	1.5	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
Rad50_zn_hook	PF04423.9	gi|15921478|ref|NP_377147.1|	-	0.94	8.9	3.2	2.4	7.6	0.2	2.8	2	0	0	2	2	2	0	Rad50	zinc	hook	motif
AAA_23	PF13476.1	gi|15921478|ref|NP_377147.1|	-	2.6	8.3	0.0	2.6	8.3	0.0	3.0	3	1	0	3	3	3	0	AAA	domain
Topoisom_bac	PF01131.15	gi|15921479|ref|NP_377148.1|	-	1.7e-102	343.2	0.4	2.4e-102	342.7	0.3	1.2	1	0	0	1	1	1	1	DNA	topoisomerase
Toprim	PF01751.17	gi|15921479|ref|NP_377148.1|	-	5e-11	42.4	0.1	2.4e-10	40.2	0.0	2.2	2	0	0	2	2	2	1	Toprim	domain
RNA_pol_Rpb6	PF01192.17	gi|15921480|ref|NP_377149.1|	-	2.2e-17	62.5	0.1	2.8e-17	62.1	0.0	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb6
Aminotran_5	PF00266.14	gi|15921481|ref|NP_377150.1|	-	3.2e-27	95.2	0.0	3.9e-27	94.9	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-V
Aminotran_1_2	PF00155.16	gi|15921481|ref|NP_377150.1|	-	0.00015	20.8	0.0	0.00036	19.6	0.0	1.5	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Cys_Met_Meta_PP	PF01053.15	gi|15921481|ref|NP_377150.1|	-	0.00017	19.9	0.0	0.00025	19.4	0.0	1.1	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
DUF521	PF04412.8	gi|15921481|ref|NP_377150.1|	-	0.032	12.7	0.0	0.061	11.8	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF521)
OKR_DC_1	PF01276.15	gi|15921481|ref|NP_377150.1|	-	0.038	12.5	0.1	0.16	10.4	0.0	1.8	2	0	0	2	2	2	0	Orn/Lys/Arg	decarboxylase,	major	domain
2-Hacid_dh_C	PF02826.14	gi|15921482|ref|NP_377151.1|	-	1.5e-50	170.8	0.6	2.9e-50	169.8	0.2	1.6	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.25	gi|15921482|ref|NP_377151.1|	-	2e-34	117.9	0.9	2.4e-34	117.6	0.7	1.0	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
AdoHcyase_NAD	PF00670.16	gi|15921482|ref|NP_377151.1|	-	6.8e-05	22.7	4.6	0.0002	21.2	0.6	2.3	2	0	0	2	2	2	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
NAD_binding_2	PF03446.10	gi|15921482|ref|NP_377151.1|	-	0.00045	20.0	2.1	0.00055	19.7	0.3	2.0	2	1	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
VirK	PF06903.7	gi|15921482|ref|NP_377151.1|	-	0.0029	17.3	0.0	0.006	16.3	0.0	1.5	1	0	0	1	1	1	1	VirK	protein
IlvN	PF07991.7	gi|15921482|ref|NP_377151.1|	-	0.014	14.7	0.1	0.037	13.3	0.1	1.8	1	0	0	1	1	1	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
3HCDH_N	PF02737.13	gi|15921482|ref|NP_377151.1|	-	0.021	14.4	0.1	0.048	13.3	0.0	1.6	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.12	gi|15921482|ref|NP_377151.1|	-	0.048	14.1	0.7	0.43	11.0	0.1	2.7	2	0	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
Ub-RnfH	PF03658.9	gi|15921482|ref|NP_377151.1|	-	0.067	13.0	1.0	2.2	8.2	0.1	2.8	1	1	1	2	2	2	0	RnfH	family	Ubiquitin
Rossmann-like	PF10727.4	gi|15921482|ref|NP_377151.1|	-	0.11	12.2	0.6	0.56	9.9	0.1	2.1	2	0	0	2	2	2	0	Rossmann-like	domain
PTS_IIB	PF02302.12	gi|15921482|ref|NP_377151.1|	-	0.19	12.2	9.0	0.36	11.3	0.5	3.7	3	1	1	4	4	4	0	PTS	system,	Lactose/Cellobiose	specific	IIB	subunit
UDPG_MGDP_dh_N	PF03721.9	gi|15921482|ref|NP_377151.1|	-	0.35	10.2	4.7	0.33	10.3	0.3	2.7	3	1	0	3	3	3	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
HhH-GPD	PF00730.20	gi|15921483|ref|NP_377152.1|	-	4.9e-05	23.5	0.0	8.3e-05	22.8	0.0	1.4	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
DUF3552	PF12072.3	gi|15921483|ref|NP_377152.1|	-	0.075	12.2	0.0	0.12	11.5	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3552)
DUF1296	PF06972.6	gi|15921484|ref|NP_377153.1|	-	0.053	13.4	3.2	0.15	12.0	2.2	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1296)
DUF1168	PF06658.7	gi|15921484|ref|NP_377153.1|	-	0.073	12.5	13.4	0.11	11.9	9.3	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1168)
NAD_binding_8	PF13450.1	gi|15921487|ref|NP_377156.1|	-	7.8e-05	22.6	0.0	0.00024	21.0	0.0	1.8	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
3HCDH_N	PF02737.13	gi|15921487|ref|NP_377156.1|	-	0.14	11.8	0.0	0.27	10.8	0.0	1.5	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_Gly3P_dh_N	PF01210.18	gi|15921487|ref|NP_377156.1|	-	0.14	11.8	0.0	0.31	10.7	0.0	1.5	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
CT47	PF15623.1	gi|15921487|ref|NP_377156.1|	-	0.21	11.3	0.1	0.28	10.9	0.1	1.1	1	0	0	1	1	1	0	Cancer/testis	gene	family	47
tRNA-synt_1	PF00133.17	gi|161751094|ref|NP_377157.2|	-	2.5e-131	438.6	0.0	1.4e-130	436.1	0.0	1.9	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|161751094|ref|NP_377157.2|	-	4.2e-31	107.7	0.4	8.9e-31	106.7	0.3	1.5	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.6	gi|161751094|ref|NP_377157.2|	-	1.3e-29	103.0	0.0	5.6e-13	48.3	0.0	3.4	3	0	0	3	3	3	3	tRNA	synthetases	class	I	(M)
tRNA-synt_1_2	PF13603.1	gi|161751094|ref|NP_377157.2|	-	3.4e-07	29.7	0.0	3.9e-05	23.0	0.0	2.9	1	1	2	3	3	3	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1d	PF00750.14	gi|161751094|ref|NP_377157.2|	-	0.00015	20.7	0.0	0.024	13.4	0.0	2.7	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(R)
tRNA-synt_1e	PF01406.14	gi|161751094|ref|NP_377157.2|	-	0.023	13.8	0.0	2.2	7.3	0.0	2.5	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(C)	catalytic	domain
NTP_transf_5	PF14907.1	gi|161751094|ref|NP_377157.2|	-	0.1	11.9	1.6	1.3	8.3	0.0	2.5	3	0	0	3	3	3	0	Uncharacterised	nucleotidyltransferase
Aminotran_1_2	PF00155.16	gi|15921489|ref|NP_377158.1|	-	2.3e-74	250.5	0.0	2.7e-74	250.3	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
DegT_DnrJ_EryC1	PF01041.12	gi|15921489|ref|NP_377158.1|	-	6.4e-10	38.5	0.0	4.6e-09	35.7	0.0	2.0	2	0	0	2	2	2	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_5	PF00266.14	gi|15921489|ref|NP_377158.1|	-	7e-07	28.3	0.0	2.5e-06	26.4	0.0	1.8	2	0	0	2	2	2	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.15	gi|15921489|ref|NP_377158.1|	-	1.1e-05	23.9	0.0	1.9e-05	23.1	0.0	1.3	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Alliinase_C	PF04864.8	gi|15921489|ref|NP_377158.1|	-	0.012	14.2	0.3	1.2	7.7	0.1	2.2	2	0	0	2	2	2	0	Allinase
OKR_DC_1	PF01276.15	gi|15921489|ref|NP_377158.1|	-	0.047	12.2	0.0	0.13	10.8	0.0	1.7	2	1	0	2	2	2	0	Orn/Lys/Arg	decarboxylase,	major	domain
IGPS	PF00218.16	gi|15921490|ref|NP_377159.1|	-	3.8e-73	245.6	1.0	4.3e-73	245.5	0.7	1.0	1	0	0	1	1	1	1	Indole-3-glycerol	phosphate	synthase
His_biosynth	PF00977.16	gi|15921490|ref|NP_377159.1|	-	0.00011	21.5	0.5	0.003	16.8	0.0	2.3	1	1	1	2	2	2	1	Histidine	biosynthesis	protein
FMN_dh	PF01070.13	gi|15921490|ref|NP_377159.1|	-	0.0023	16.8	0.0	1.1	7.9	0.0	2.1	2	0	0	2	2	2	2	FMN-dependent	dehydrogenase
PcrB	PF01884.12	gi|15921490|ref|NP_377159.1|	-	0.0084	15.3	1.0	0.083	12.1	0.0	2.4	1	1	2	3	3	3	1	PcrB	family
ThiG	PF05690.9	gi|15921490|ref|NP_377159.1|	-	0.04	12.9	0.0	1.4	7.9	0.0	2.2	2	0	0	2	2	2	0	Thiazole	biosynthesis	protein	ThiG
TMP-TENI	PF02581.12	gi|15921490|ref|NP_377159.1|	-	0.058	12.5	0.1	0.27	10.3	0.1	2.0	1	1	0	2	2	2	0	Thiamine	monophosphate	synthase/TENI
QRPTase_C	PF01729.14	gi|15921490|ref|NP_377159.1|	-	0.1	12.1	0.2	0.22	11.0	0.1	1.5	1	1	0	1	1	1	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
GATase	PF00117.23	gi|15921491|ref|NP_377160.1|	-	4.2e-51	173.1	0.0	4.7e-51	172.9	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|15921491|ref|NP_377160.1|	-	1.2e-12	47.7	0.0	2.3e-12	46.8	0.0	1.5	1	1	0	1	1	1	1	Peptidase	C26
Chorismate_bind	PF00425.13	gi|15921492|ref|NP_377161.1|	-	4.1e-90	301.5	0.0	5.1e-90	301.2	0.0	1.1	1	0	0	1	1	1	1	chorismate	binding	enzyme
Anth_synt_I_N	PF04715.8	gi|15921492|ref|NP_377161.1|	-	2.7e-23	82.5	0.0	5.6e-23	81.5	0.0	1.6	1	0	0	1	1	1	1	Anthranilate	synthase	component	I,	N	terminal	region
PRAI	PF00697.17	gi|15921493|ref|NP_377162.1|	-	2.6e-20	72.8	0.1	3.2e-20	72.5	0.0	1.0	1	0	0	1	1	1	1	N-(5'phosphoribosyl)anthranilate	(PRA)	isomerase
Lum_binding	PF00677.12	gi|15921493|ref|NP_377162.1|	-	0.29	11.0	2.0	0.63	9.9	0.4	2.4	2	2	0	2	2	2	0	Lumazine	binding	domain
Glycos_transf_3	PF00591.16	gi|15921494|ref|NP_377163.1|	-	1.1e-77	260.8	0.0	1.5e-77	260.4	0.0	1.1	1	0	0	1	1	1	1	Glycosyl	transferase	family,	a/b	domain
Glycos_trans_3N	PF02885.12	gi|15921494|ref|NP_377163.1|	-	9.5e-20	69.9	0.3	1.7e-19	69.1	0.2	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family,	helical	bundle	domain
Trp_syntA	PF00290.15	gi|15921495|ref|NP_377164.1|	-	1.9e-38	131.5	0.1	2.2e-38	131.2	0.0	1.0	1	0	0	1	1	1	1	Tryptophan	synthase	alpha	chain
His_biosynth	PF00977.16	gi|15921495|ref|NP_377164.1|	-	7.2e-06	25.4	0.3	2.7e-05	23.5	0.0	1.9	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
NMO	PF03060.10	gi|15921495|ref|NP_377164.1|	-	0.0028	16.8	0.0	0.0041	16.3	0.0	1.4	1	0	0	1	1	1	1	Nitronate	monooxygenase
PcrB	PF01884.12	gi|15921495|ref|NP_377164.1|	-	0.0038	16.4	0.4	0.01	15.1	0.1	1.9	1	1	0	1	1	1	1	PcrB	family
TMP-TENI	PF02581.12	gi|15921495|ref|NP_377164.1|	-	0.028	13.5	0.0	0.078	12.0	0.0	1.7	2	0	0	2	2	2	0	Thiamine	monophosphate	synthase/TENI
Ribul_P_3_epim	PF00834.14	gi|15921495|ref|NP_377164.1|	-	0.032	13.3	0.0	0.044	12.8	0.0	1.3	1	0	0	1	1	1	0	Ribulose-phosphate	3	epimerase	family
FMN_dh	PF01070.13	gi|15921495|ref|NP_377164.1|	-	0.069	11.9	0.1	0.11	11.2	0.0	1.3	1	0	0	1	1	1	0	FMN-dependent	dehydrogenase
PALP	PF00291.20	gi|15921496|ref|NP_377165.1|	-	2.4e-34	118.9	0.0	3.1e-34	118.6	0.0	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
Acylphosphatase	PF00708.13	gi|15921497|ref|NP_377166.1|	-	1e-28	99.2	0.0	1.1e-28	99.1	0.0	1.0	1	0	0	1	1	1	1	Acylphosphatase
NAD_binding_5	PF07994.7	gi|15921498|ref|NP_377167.1|	-	1.2e-54	185.8	0.0	3.2e-54	184.4	0.0	1.6	1	1	0	1	1	1	1	Myo-inositol-1-phosphate	synthase
Inos-1-P_synth	PF01658.12	gi|15921498|ref|NP_377167.1|	-	4.9e-32	110.0	0.0	9e-32	109.2	0.0	1.4	1	0	0	1	1	1	1	Myo-inositol-1-phosphate	synthase
PPDK_N	PF01326.14	gi|15921499|ref|NP_377168.1|	-	8.2e-102	340.6	0.1	1.2e-101	340.0	0.0	1.3	1	0	0	1	1	1	1	Pyruvate	phosphate	dikinase,	PEP/pyruvate	binding	domain
PEP-utilizers_C	PF02896.13	gi|15921499|ref|NP_377168.1|	-	6.5e-80	268.1	0.0	9.9e-80	267.5	0.0	1.2	1	0	0	1	1	1	1	PEP-utilising	enzyme,	TIM	barrel	domain
PEP-utilizers	PF00391.18	gi|15921499|ref|NP_377168.1|	-	1.6e-29	101.2	1.5	3.6e-29	100.1	1.0	1.6	1	0	0	1	1	1	1	PEP-utilising	enzyme,	mobile	domain
Snf7	PF03357.16	gi|15921500|ref|NP_377169.1|	-	0.00014	21.3	4.7	0.00023	20.5	3.2	1.5	1	1	0	1	1	1	1	Snf7
FHIPEP	PF00771.15	gi|15921500|ref|NP_377169.1|	-	0.0022	16.4	2.0	0.0026	16.1	1.4	1.1	1	0	0	1	1	1	1	FHIPEP	family
LOH1CR12	PF10158.4	gi|15921500|ref|NP_377169.1|	-	0.0081	15.9	0.2	0.017	14.8	0.1	1.6	1	0	0	1	1	1	1	Tumour	suppressor	protein
Pox_F11	PF04943.7	gi|15921500|ref|NP_377169.1|	-	0.015	14.2	0.2	0.016	14.0	0.1	1.2	1	0	0	1	1	1	0	Poxvirus	F11	protein
Stap_Strp_tox_C	PF02876.12	gi|15921501|ref|NP_377170.1|	-	0.013	15.6	0.2	0.02	15.0	0.1	1.3	1	0	0	1	1	1	0	Staphylococcal/Streptococcal	toxin,	beta-grasp	domain
UbiD	PF01977.11	gi|15921502|ref|NP_377171.1|	-	2.2e-128	428.1	0.0	2.5e-128	427.9	0.0	1.0	1	0	0	1	1	1	1	3-octaprenyl-4-hydroxybenzoate	carboxy-lyase
DUF1525	PF07511.6	gi|15921502|ref|NP_377171.1|	-	0.11	12.4	0.0	2.3	8.2	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1525)
PALP	PF00291.20	gi|15921503|ref|NP_377172.1|	-	2.4e-72	243.7	0.3	2.9e-72	243.5	0.2	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
A2L_zn_ribbon	PF08792.5	gi|15921503|ref|NP_377172.1|	-	0.0057	16.0	1.7	0.26	10.8	0.1	2.3	2	0	0	2	2	2	1	A2L	zinc	ribbon	domain
HypA	PF01155.14	gi|15921503|ref|NP_377172.1|	-	0.011	15.4	0.1	0.017	14.7	0.0	1.3	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
Prok-RING_1	PF14446.1	gi|15921503|ref|NP_377172.1|	-	0.016	14.9	0.4	0.027	14.1	0.3	1.2	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
DNA_RNApol_7kD	PF03604.8	gi|15921503|ref|NP_377172.1|	-	0.027	13.9	2.2	0.053	12.9	1.5	1.4	1	0	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
RNA_POL_M_15KD	PF02150.11	gi|15921503|ref|NP_377172.1|	-	0.052	13.2	0.7	6.5	6.5	0.0	2.3	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
PhnA_Zn_Ribbon	PF08274.7	gi|15921503|ref|NP_377172.1|	-	0.15	11.8	1.0	0.34	10.7	0.7	1.5	1	0	0	1	1	1	0	PhnA	Zinc-Ribbon
Zn-ribbon_8	PF09723.5	gi|15921503|ref|NP_377172.1|	-	0.31	11.0	1.3	0.83	9.6	0.9	1.7	1	1	0	1	1	1	0	Zinc	ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|15921503|ref|NP_377172.1|	-	0.39	10.0	2.0	0.98	8.7	1.4	1.7	1	1	0	1	1	1	0	TFIIB	zinc-binding
DUF1451	PF07295.6	gi|15921503|ref|NP_377172.1|	-	0.48	10.1	1.2	0.78	9.4	0.8	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1451)
zf-C2HC_2	PF13913.1	gi|15921503|ref|NP_377172.1|	-	1.2	8.8	2.8	17	5.2	0.1	2.3	2	0	0	2	2	2	0	zinc-finger	of	a	C2HC-type
AA_kinase	PF00696.23	gi|15921504|ref|NP_377173.1|	-	6.4e-44	150.3	1.1	7.2e-44	150.1	0.1	1.5	2	0	0	2	2	2	1	Amino	acid	kinase	family
ACT	PF01842.20	gi|15921504|ref|NP_377173.1|	-	0.062	12.8	6.7	1.5	8.4	0.5	3.4	3	0	0	3	3	3	0	ACT	domain
MCR_beta_N	PF02783.10	gi|15921504|ref|NP_377173.1|	-	0.064	12.6	3.2	0.14	11.6	2.2	1.5	1	0	0	1	1	1	0	Methyl-coenzyme	M	reductase	beta	subunit,	N-terminal	domain
Semialdhyde_dh	PF01118.19	gi|15921505|ref|NP_377174.1|	-	6e-33	113.7	0.0	1e-32	112.9	0.0	1.4	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Semialdhyde_dhC	PF02774.13	gi|15921505|ref|NP_377174.1|	-	7.2e-30	104.2	0.3	1.1e-29	103.6	0.2	1.3	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
Gp_dh_C	PF02800.15	gi|15921505|ref|NP_377174.1|	-	0.00022	20.6	0.3	0.0017	17.8	0.1	2.3	2	1	0	2	2	2	1	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
DapB_N	PF01113.15	gi|15921505|ref|NP_377174.1|	-	0.00058	19.7	0.0	0.0012	18.7	0.0	1.5	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
NAD_binding_10	PF13460.1	gi|15921505|ref|NP_377174.1|	-	0.0055	16.7	0.0	0.014	15.3	0.0	1.7	2	0	0	2	2	2	1	NADH(P)-binding
Ldh_1_N	PF00056.18	gi|15921505|ref|NP_377174.1|	-	0.011	15.5	0.1	0.028	14.2	0.1	1.7	1	0	0	1	1	1	0	lactate/malate	dehydrogenase,	NAD	binding	domain
PHP_C	PF13263.1	gi|15921506|ref|NP_377175.1|	-	1.5e-14	53.2	0.0	3.5e-14	52.0	0.0	1.7	1	0	0	1	1	1	1	PHP-associated
PHP	PF02811.14	gi|15921506|ref|NP_377175.1|	-	1.7e-12	47.4	0.5	1.4e-11	44.4	0.3	2.3	1	1	0	1	1	1	1	PHP	domain
DUF650	PF04894.7	gi|15921507|ref|NP_377176.1|	-	5.6e-99	331.0	0.3	7.1e-99	330.6	0.2	1.1	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF650)
DUF651	PF04895.7	gi|15921507|ref|NP_377176.1|	-	1.2e-35	121.4	0.1	2.1e-35	120.6	0.1	1.4	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF651)
OTCace	PF00185.19	gi|15921508|ref|NP_377177.1|	-	3.3e-47	160.2	0.0	4.9e-47	159.7	0.0	1.2	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
OTCace_N	PF02729.16	gi|15921508|ref|NP_377177.1|	-	1.6e-46	157.4	0.0	2.4e-46	156.9	0.0	1.2	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
DUF1327	PF07041.6	gi|15921508|ref|NP_377177.1|	-	0.12	12.2	0.0	0.22	11.4	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1327)
HTH_24	PF13412.1	gi|15921509|ref|NP_377178.1|	-	0.00038	19.7	0.6	0.0016	17.7	0.4	2.2	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_45	PF14947.1	gi|15921509|ref|NP_377178.1|	-	0.0029	17.3	0.3	0.0079	15.9	0.2	1.8	1	0	0	1	1	1	1	Winged	helix-turn-helix
Ribosomal_S19e	PF01090.14	gi|15921509|ref|NP_377178.1|	-	0.021	14.2	0.1	0.043	13.2	0.1	1.6	1	0	0	1	1	1	0	Ribosomal	protein	S19e
HTH_11	PF08279.7	gi|15921509|ref|NP_377178.1|	-	0.033	13.8	0.5	0.033	13.8	0.3	2.3	3	0	0	3	3	3	0	HTH	domain
MarR	PF01047.17	gi|15921509|ref|NP_377178.1|	-	0.033	13.8	0.6	0.033	13.8	0.4	2.0	2	0	0	2	2	2	0	MarR	family
PaaX	PF07848.7	gi|15921509|ref|NP_377178.1|	-	0.042	13.8	0.1	0.18	11.8	0.0	2.1	2	0	0	2	2	2	0	PaaX-like	protein
HTH_Crp_2	PF13545.1	gi|15921509|ref|NP_377178.1|	-	0.072	12.8	1.3	0.71	9.7	0.1	2.5	2	0	0	2	2	2	0	Crp-like	helix-turn-helix	domain
DUF4093	PF13331.1	gi|15921509|ref|NP_377178.1|	-	0.075	13.2	0.0	0.18	12.0	0.0	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4093)
E2F_TDP	PF02319.15	gi|15921509|ref|NP_377178.1|	-	0.095	12.2	0.1	2.5	7.7	0.0	2.4	2	0	0	2	2	2	0	E2F/DP	family	winged-helix	DNA-binding	domain
Topoisom_bac	PF01131.15	gi|15921509|ref|NP_377178.1|	-	0.1	11.3	3.2	0.038	12.8	0.4	1.5	2	0	0	2	2	2	0	DNA	topoisomerase
Fe_dep_repress	PF01325.14	gi|15921509|ref|NP_377178.1|	-	0.13	12.1	0.2	0.4	10.6	0.0	1.9	2	0	0	2	2	2	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
NAD_kinase	PF01513.16	gi|15921510|ref|NP_377179.1|	-	2.7e-65	219.9	0.6	3.1e-65	219.8	0.4	1.0	1	0	0	1	1	1	1	ATP-NAD	kinase
DAGK_cat	PF00781.19	gi|15921510|ref|NP_377179.1|	-	0.0028	17.1	0.1	0.0086	15.5	0.0	1.9	2	0	0	2	2	2	1	Diacylglycerol	kinase	catalytic	domain
DeoRC	PF00455.17	gi|15921510|ref|NP_377179.1|	-	0.039	13.5	0.0	0.092	12.3	0.0	1.6	2	0	0	2	2	2	0	DeoR	C	terminal	sensor	domain
HTH_45	PF14947.1	gi|15921511|ref|NP_377180.1|	-	1.2e-05	25.0	0.4	0.0011	18.7	0.0	2.6	2	1	0	2	2	2	1	Winged	helix-turn-helix
Methyltransf_9	PF08003.6	gi|15921511|ref|NP_377180.1|	-	0.00081	18.1	1.2	0.0012	17.6	0.8	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1698)
Rrf2	PF02082.15	gi|15921511|ref|NP_377180.1|	-	0.0027	17.7	0.0	0.2	11.7	0.0	2.3	2	0	0	2	2	2	1	Transcriptional	regulator
TrmB	PF01978.14	gi|15921511|ref|NP_377180.1|	-	0.011	15.3	0.1	0.042	13.5	0.0	1.9	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|15921511|ref|NP_377180.1|	-	0.018	14.7	0.0	0.039	13.6	0.0	1.5	1	0	0	1	1	1	0	MarR	family
GDPD	PF03009.12	gi|15921511|ref|NP_377180.1|	-	0.039	13.4	0.9	0.056	12.9	0.6	1.3	1	0	0	1	1	1	0	Glycerophosphoryl	diester	phosphodiesterase	family
FaeA	PF04703.7	gi|15921511|ref|NP_377180.1|	-	0.04	14.0	0.0	0.089	12.9	0.0	1.5	1	0	0	1	1	1	0	FaeA-like	protein
FeoC	PF09012.5	gi|15921511|ref|NP_377180.1|	-	0.045	13.4	0.0	0.31	10.7	0.0	2.2	2	0	0	2	2	2	0	FeoC	like	transcriptional	regulator
HTH_29	PF13551.1	gi|15921511|ref|NP_377180.1|	-	0.056	13.5	0.1	0.38	10.9	0.0	2.1	2	0	0	2	2	2	0	Winged	helix-turn	helix
HTH_5	PF01022.15	gi|15921511|ref|NP_377180.1|	-	0.058	13.0	0.3	0.12	12.0	0.0	1.8	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
PPO1_KFDV	PF12143.3	gi|15921511|ref|NP_377180.1|	-	0.068	13.0	0.1	0.13	12.1	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF_B2219)
MRAP	PF15183.1	gi|15921511|ref|NP_377180.1|	-	0.07	12.7	0.0	0.2	11.2	0.0	1.7	1	0	0	1	1	1	0	Melanocortin-2	receptor	accessory	protein	family
NEL	PF14496.1	gi|15921511|ref|NP_377180.1|	-	0.078	12.2	0.2	0.31	10.2	0.1	1.9	1	1	1	2	2	2	0	C-terminal	novel	E3	ligase,	LRR-interacting
HTH_23	PF13384.1	gi|15921511|ref|NP_377180.1|	-	0.088	12.4	0.1	0.25	11.0	0.1	1.7	1	0	0	1	1	1	0	Homeodomain-like	domain
Phage_int_SAM_5	PF13102.1	gi|15921511|ref|NP_377180.1|	-	0.23	11.4	10.5	0.16	11.9	6.0	1.7	2	1	0	2	2	1	0	Phage	integrase	SAM-like	domain
Colicin_Pyocin	PF01320.13	gi|15921511|ref|NP_377180.1|	-	0.44	10.4	4.5	0.43	10.4	1.0	2.4	1	1	1	2	2	2	0	Colicin	immunity	protein	/	pyocin	immunity	protein
Arch_ATPase	PF01637.13	gi|15921511|ref|NP_377180.1|	-	1.5	8.5	9.2	3.1	7.4	6.4	1.5	1	1	0	1	1	1	0	Archaeal	ATPase
efThoc1	PF11957.3	gi|15921512|ref|NP_377181.1|	-	0.05	12.0	1.2	0.054	11.9	0.9	1.0	1	0	0	1	1	1	0	THO	complex	subunit	1	transcription	elongation	factor
Inos-1-P_synth	PF01658.12	gi|15921512|ref|NP_377181.1|	-	0.13	12.1	0.7	0.15	11.9	0.5	1.2	1	0	0	1	1	1	0	Myo-inositol-1-phosphate	synthase
FKBP_N	PF01346.13	gi|15921512|ref|NP_377181.1|	-	0.21	11.6	2.1	0.31	11.0	1.5	1.2	1	0	0	1	1	1	0	Domain	amino	terminal	to	FKBP-type	peptidyl-prolyl	isomerase
SMC_hinge	PF06470.8	gi|15921513|ref|NP_377182.1|	-	0.047	13.6	0.1	0.087	12.7	0.1	1.4	1	0	0	1	1	1	0	SMC	proteins	Flexible	Hinge	Domain
Cript	PF10235.4	gi|15921514|ref|NP_377183.1|	-	0.14	12.5	9.8	0.35	11.2	1.2	3.0	3	0	0	3	3	3	0	Microtubule-associated	protein	CRIPT
DUF4182	PF13790.1	gi|15921514|ref|NP_377183.1|	-	2.3	8.0	11.4	30	4.4	0.1	4.2	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF4182)
zinc-ribbons_6	PF07191.7	gi|15921514|ref|NP_377183.1|	-	2.4	8.0	10.2	0.47	10.2	0.8	2.9	3	0	0	3	3	3	0	zinc-ribbons
Cpn60_TCP1	PF00118.19	gi|15921515|ref|NP_377184.1|	-	1.7e-162	541.4	12.5	2e-162	541.2	8.7	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
SdpI	PF13630.1	gi|15921516|ref|NP_377185.1|	-	2.6	7.7	6.6	1	9.0	0.9	2.1	1	1	1	2	2	2	0	SdpI/YhfL	protein	family
TrmB	PF01978.14	gi|15921518|ref|NP_377187.1|	-	0.0041	16.8	1.2	0.0044	16.6	0.1	1.6	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
DRP	PF06044.7	gi|15921518|ref|NP_377187.1|	-	0.027	13.4	0.0	0.039	12.9	0.0	1.5	1	1	0	1	1	1	0	Dam-replacing	family
DUF763	PF05559.6	gi|15921518|ref|NP_377187.1|	-	0.041	12.8	0.7	0.044	12.7	0.5	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF763)
HTH_9	PF08221.6	gi|15921518|ref|NP_377187.1|	-	0.075	12.9	0.0	0.13	12.1	0.0	1.4	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
APC2	PF08672.6	gi|15921518|ref|NP_377187.1|	-	0.18	12.0	1.1	13	6.1	0.0	2.4	2	1	1	3	3	3	0	Anaphase	promoting	complex	(APC)	subunit	2
tRNA-synt_1d	PF00750.14	gi|15921521|ref|NP_377190.1|	-	7.7e-48	163.1	1.0	3.3e-26	91.9	0.3	2.1	1	1	1	2	2	2	2	tRNA	synthetases	class	I	(R)
DALR_1	PF05746.10	gi|15921521|ref|NP_377190.1|	-	1.1e-27	96.3	0.4	2.1e-26	92.1	0.0	2.6	2	0	0	2	2	2	1	DALR	anticodon	binding	domain
tRNA-synt_1g	PF09334.6	gi|15921521|ref|NP_377190.1|	-	0.00013	20.8	1.0	0.01	14.5	0.1	2.6	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(M)
tRNA-synt_1e	PF01406.14	gi|15921521|ref|NP_377190.1|	-	0.00071	18.7	2.1	0.04	13.0	0.3	2.9	2	1	0	2	2	2	1	tRNA	synthetases	class	I	(C)	catalytic	domain
Fungal_trans_2	PF11951.3	gi|15921521|ref|NP_377190.1|	-	0.014	14.0	0.1	0.053	12.1	0.1	1.9	3	0	0	3	3	3	0	Fungal	specific	transcription	factor	domain
tRNA-synt_1	PF00133.17	gi|15921521|ref|NP_377190.1|	-	0.054	11.4	0.3	0.25	9.3	0.0	2.0	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Syntaxin_2	PF14523.1	gi|15921521|ref|NP_377190.1|	-	0.078	13.0	5.2	0.039	13.9	1.3	2.2	2	1	0	2	2	2	0	Syntaxin-like	protein
Hydantoinase_B	PF02538.9	gi|15921521|ref|NP_377190.1|	-	0.096	10.8	0.8	0.19	9.8	0.5	1.4	1	0	0	1	1	1	0	Hydantoinase	B/oxoprolinase
Imm47	PF15586.1	gi|15921521|ref|NP_377190.1|	-	0.52	10.1	4.8	0.3	10.9	0.5	2.4	2	0	0	2	2	2	0	Immunity	protein	47
Ribonuc_red_lgC	PF02867.10	gi|15921522|ref|NP_377191.1|	-	7.5e-176	585.8	0.0	9.5e-176	585.4	0.0	1.1	1	0	0	1	1	1	1	Ribonucleotide	reductase,	barrel	domain
Ribonuc_red_lgN	PF00317.16	gi|15921522|ref|NP_377191.1|	-	1e-29	102.1	0.2	2.5e-29	100.9	0.1	1.7	1	0	0	1	1	1	1	Ribonucleotide	reductase,	all-alpha	domain
ATP-cone	PF03477.11	gi|15921522|ref|NP_377191.1|	-	2.2e-08	34.4	0.2	2.2e-08	34.4	0.2	2.6	3	0	0	3	3	3	1	ATP	cone	domain
Sigma70_r4_2	PF08281.7	gi|15921523|ref|NP_377192.1|	-	0.034	13.5	0.1	0.081	12.4	0.0	1.7	2	0	0	2	2	2	0	Sigma-70,	region	4
HTH_23	PF13384.1	gi|15921523|ref|NP_377192.1|	-	0.04	13.5	0.0	0.067	12.8	0.0	1.4	1	0	0	1	1	1	0	Homeodomain-like	domain
UPF0175	PF03683.8	gi|15921523|ref|NP_377192.1|	-	0.098	12.1	0.1	0.22	11.0	0.0	1.5	1	1	0	1	1	1	0	Uncharacterised	protein	family	(UPF0175)
HTH_3	PF01381.17	gi|15921523|ref|NP_377192.1|	-	0.12	12.2	0.1	0.19	11.5	0.1	1.4	1	0	0	1	1	1	0	Helix-turn-helix
BACK	PF07707.10	gi|15921524|ref|NP_377193.1|	-	0.014	15.1	0.0	1.9	8.4	0.0	2.3	2	0	0	2	2	2	0	BTB	And	C-terminal	Kelch
GatB_N	PF02934.10	gi|15921525|ref|NP_377194.1|	-	6.8e-81	271.2	0.0	1e-80	270.6	0.0	1.2	1	0	0	1	1	1	1	GatB/GatE	catalytic	domain
GatB_Yqey	PF02637.13	gi|15921525|ref|NP_377194.1|	-	1.2e-25	89.9	10.1	1.2e-25	89.9	7.0	1.9	2	0	0	2	2	2	1	GatB	domain
GAD	PF02938.9	gi|15921525|ref|NP_377194.1|	-	1.6e-12	47.3	1.8	3.8e-12	46.1	0.0	2.3	2	0	0	2	2	2	1	GAD	domain
YqeY	PF09424.5	gi|15921525|ref|NP_377194.1|	-	1.8e-07	31.1	2.6	3.6e-07	30.1	1.8	1.5	1	0	0	1	1	1	1	Yqey-like	protein
4HB_MCP_1	PF12729.2	gi|15921525|ref|NP_377194.1|	-	0.35	10.1	16.5	0.68	9.2	4.8	2.4	2	0	0	2	2	2	0	Four	helix	bundle	sensory	module	for	signal	transduction
DUF3237	PF11578.3	gi|15921526|ref|NP_377195.1|	-	0.12	11.7	0.0	0.18	11.1	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3237)
Asparaginase	PF00710.15	gi|15921527|ref|NP_377196.1|	-	2e-92	309.4	0.0	2.4e-92	309.1	0.0	1.1	1	0	0	1	1	1	1	Asparaginase
Ribosomal_S30	PF04758.9	gi|15921528|ref|NP_377197.1|	-	6.4e-14	51.4	5.0	7.9e-14	51.1	3.5	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S30
Sas10	PF09368.5	gi|15921528|ref|NP_377197.1|	-	0.051	13.7	4.9	0.061	13.5	3.4	1.3	1	0	0	1	1	1	0	Sas10	C-terminal	domain
Nop	PF01798.13	gi|15921529|ref|NP_377198.1|	-	2.3e-55	185.9	0.1	4.2e-55	185.1	0.1	1.4	1	0	0	1	1	1	1	Putative	snoRNA	binding	domain
NOSIC	PF08060.8	gi|15921529|ref|NP_377198.1|	-	1.7e-24	85.3	0.2	4.7e-24	83.9	0.1	1.8	1	0	0	1	1	1	1	NOSIC	(NUC001)	domain
Cytochrom_B558a	PF05038.8	gi|15921529|ref|NP_377198.1|	-	0.17	11.5	0.2	0.26	10.9	0.1	1.2	1	0	0	1	1	1	0	Cytochrome	Cytochrome	b558	alpha-subunit
Fibrillarin	PF01269.12	gi|15921530|ref|NP_377199.1|	-	2.4e-100	334.2	0.0	2.8e-100	333.9	0.0	1.0	1	0	0	1	1	1	1	Fibrillarin
PCMT	PF01135.14	gi|15921530|ref|NP_377199.1|	-	0.011	15.2	0.0	0.025	14.1	0.0	1.7	1	1	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_26	PF13659.1	gi|15921530|ref|NP_377199.1|	-	0.032	14.2	0.0	0.071	13.1	0.0	1.7	1	1	0	1	1	1	0	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|15921530|ref|NP_377199.1|	-	0.072	12.6	0.0	0.86	9.1	0.0	2.4	1	1	0	1	1	1	0	Methyltransferase	domain
GCD14	PF08704.5	gi|15921530|ref|NP_377199.1|	-	0.084	12.3	0.1	0.25	10.8	0.0	1.8	1	1	0	1	1	1	0	tRNA	methyltransferase	complex	GCD14	subunit
DUF61	PF01886.11	gi|15921531|ref|NP_377200.1|	-	2e-22	79.4	0.7	2.4e-22	79.1	0.5	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF61
HTH_3	PF01381.17	gi|15921532|ref|NP_377201.1|	-	1.3e-10	40.8	0.2	3.9e-10	39.4	0.0	1.8	2	0	0	2	2	2	1	Helix-turn-helix
HTH_19	PF12844.2	gi|15921532|ref|NP_377201.1|	-	3.2e-08	33.4	6.9	7.2e-08	32.3	0.0	3.2	3	1	0	3	3	3	1	Helix-turn-helix	domain
HTH_31	PF13560.1	gi|15921532|ref|NP_377201.1|	-	1.6e-06	28.1	0.0	3e-06	27.3	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_25	PF13413.1	gi|15921532|ref|NP_377201.1|	-	0.0034	16.9	0.1	0.028	14.0	0.0	2.3	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|15921532|ref|NP_377201.1|	-	0.01	15.4	0.0	0.042	13.5	0.0	2.0	3	0	0	3	3	3	0	Homeodomain-like	domain
HTH_22	PF13309.1	gi|15921532|ref|NP_377201.1|	-	0.01	15.5	2.0	0.027	14.2	0.0	2.8	4	0	0	4	4	4	0	HTH	domain
HTH_17	PF12728.2	gi|15921532|ref|NP_377201.1|	-	0.01	16.0	0.1	1.3	9.3	0.0	3.2	3	0	0	3	3	3	0	Helix-turn-helix	domain
Phage_AlpA	PF05930.7	gi|15921532|ref|NP_377201.1|	-	0.011	15.4	0.1	0.086	12.5	0.0	2.3	2	0	0	2	2	2	0	Prophage	CP4-57	regulatory	protein	(AlpA)
Hjc	PF01870.13	gi|15921532|ref|NP_377201.1|	-	0.015	14.9	8.2	1.5	8.4	1.6	3.2	2	1	0	2	2	2	0	Archaeal	holliday	junction	resolvase	(hjc)
MerR_1	PF13411.1	gi|15921532|ref|NP_377201.1|	-	0.061	13.0	0.0	0.79	9.5	0.0	2.7	3	0	0	3	3	3	0	MerR	HTH	family	regulatory	protein
MerR	PF00376.18	gi|15921532|ref|NP_377201.1|	-	0.07	12.6	0.3	0.23	11.0	0.0	2.0	2	0	0	2	2	2	0	MerR	family	regulatory	protein
TetR_N	PF00440.18	gi|15921532|ref|NP_377201.1|	-	0.081	12.5	0.0	0.39	10.4	0.0	2.1	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	tetR	family
Sigma70_r4	PF04545.11	gi|15921532|ref|NP_377201.1|	-	0.094	12.0	0.1	0.71	9.2	0.0	2.2	2	0	0	2	2	2	0	Sigma-70,	region	4
TRM	PF02005.11	gi|15921533|ref|NP_377202.1|	-	2.2e-86	290.1	0.0	2.7e-86	289.8	0.0	1.0	1	0	0	1	1	1	1	N2,N2-dimethylguanosine	tRNA	methyltransferase
Met_10	PF02475.11	gi|15921533|ref|NP_377202.1|	-	0.0055	16.3	0.1	0.012	15.2	0.0	1.6	2	0	0	2	2	2	1	Met-10+	like-protein
zf-ribbon_3	PF13248.1	gi|15921533|ref|NP_377202.1|	-	0.012	14.8	1.0	0.024	13.8	0.7	1.5	1	0	0	1	1	1	0	zinc-ribbon	domain
Methyltransf_31	PF13847.1	gi|15921533|ref|NP_377202.1|	-	0.056	13.0	0.1	0.2	11.2	0.0	2.1	1	1	0	1	1	1	0	Methyltransferase	domain
OrfB_Zn_ribbon	PF07282.6	gi|15921533|ref|NP_377202.1|	-	0.057	13.0	0.5	0.13	11.9	0.3	1.7	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
DZR	PF12773.2	gi|15921533|ref|NP_377202.1|	-	0.13	12.0	0.5	0.27	11.0	0.3	1.4	1	0	0	1	1	1	0	Double	zinc	ribbon
Zn_Tnp_IS1595	PF12760.2	gi|15921533|ref|NP_377202.1|	-	0.22	11.3	2.8	5.7	6.8	0.1	2.4	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
Zn-ribbon_8	PF09723.5	gi|15921533|ref|NP_377202.1|	-	1.2	9.1	9.4	1.6	8.7	5.4	2.0	2	0	0	2	2	2	0	Zinc	ribbon	domain
RNA_pol_Rpc34	PF05158.7	gi|15921534|ref|NP_377203.1|	-	1.8e-11	43.8	5.0	1.9e-06	27.2	1.1	2.0	1	1	1	2	2	2	2	RNA	polymerase	Rpc34	subunit
B-block_TFIIIC	PF04182.7	gi|15921534|ref|NP_377203.1|	-	0.00015	21.5	0.5	0.00027	20.7	0.3	1.4	1	0	0	1	1	1	1	B-block	binding	subunit	of	TFIIIC
HTH_24	PF13412.1	gi|15921534|ref|NP_377203.1|	-	0.00018	20.8	0.9	0.00034	19.9	0.2	1.8	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.2	gi|15921534|ref|NP_377203.1|	-	0.018	14.7	0.0	0.028	14.0	0.0	1.3	1	0	0	1	1	1	0	MarR	family
TFIIB	PF00382.14	gi|15921535|ref|NP_377204.1|	-	1.3e-25	88.9	0.1	4.6e-15	55.1	0.0	2.3	2	0	0	2	2	2	2	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.7	gi|15921535|ref|NP_377204.1|	-	2.4e-18	65.1	1.4	4.6e-18	64.2	0.9	1.5	1	0	0	1	1	1	1	TFIIB	zinc-binding
Sigma70_r4	PF04545.11	gi|15921535|ref|NP_377204.1|	-	6e-05	22.2	0.0	0.0049	16.1	0.0	2.5	2	0	0	2	2	2	1	Sigma-70,	region	4
OrfB_Zn_ribbon	PF07282.6	gi|15921535|ref|NP_377204.1|	-	7.6e-05	22.2	0.3	0.00021	20.8	0.2	1.7	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
zf-ribbon_3	PF13248.1	gi|15921535|ref|NP_377204.1|	-	0.00038	19.5	0.8	0.15	11.3	0.0	2.3	2	0	0	2	2	2	2	zinc-ribbon	domain
RRN7	PF11781.3	gi|15921535|ref|NP_377204.1|	-	0.002	17.6	0.1	0.0032	16.9	0.1	1.4	1	0	0	1	1	1	1	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
Ribosomal_S27e	PF01667.12	gi|15921535|ref|NP_377204.1|	-	0.0029	17.1	0.3	0.0054	16.2	0.2	1.3	1	0	0	1	1	1	1	Ribosomal	protein	S27
HTH_11	PF08279.7	gi|15921535|ref|NP_377204.1|	-	0.0051	16.4	0.4	0.079	12.6	0.1	2.6	2	0	0	2	2	2	1	HTH	domain
Phage_terminase	PF10668.4	gi|15921535|ref|NP_377204.1|	-	0.012	15.3	3.4	0.089	12.5	0.0	3.1	3	0	0	3	3	3	0	Phage	terminase	small	subunit
Zn_Tnp_IS1595	PF12760.2	gi|15921535|ref|NP_377204.1|	-	0.014	15.1	0.4	0.027	14.2	0.3	1.4	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
HTH_Mga	PF08280.6	gi|15921535|ref|NP_377204.1|	-	0.017	14.8	0.2	0.37	10.5	0.0	2.6	2	0	0	2	2	2	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
A2L_zn_ribbon	PF08792.5	gi|15921535|ref|NP_377204.1|	-	0.018	14.4	2.8	0.04	13.3	2.0	1.6	1	0	0	1	1	1	0	A2L	zinc	ribbon	domain
PhnA_Zn_Ribbon	PF08274.7	gi|15921535|ref|NP_377204.1|	-	0.02	14.6	1.0	0.041	13.6	0.7	1.5	1	0	0	1	1	1	0	PhnA	Zinc-Ribbon
zf-FPG_IleRS	PF06827.9	gi|15921535|ref|NP_377204.1|	-	0.025	14.2	0.7	0.061	12.9	0.5	1.7	1	0	0	1	1	1	0	Zinc	finger	found	in	FPG	and	IleRS
Rubredoxin	PF00301.15	gi|15921535|ref|NP_377204.1|	-	0.028	14.3	2.3	0.26	11.2	0.1	2.4	2	0	0	2	2	2	0	Rubredoxin
DZR	PF12773.2	gi|15921535|ref|NP_377204.1|	-	0.035	13.9	0.3	0.066	13.0	0.2	1.4	1	0	0	1	1	1	0	Double	zinc	ribbon
HTH_AsnC-type	PF13404.1	gi|15921535|ref|NP_377204.1|	-	0.036	13.6	0.0	0.15	11.6	0.0	2.1	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
Lar_restr_allev	PF14354.1	gi|15921535|ref|NP_377204.1|	-	0.036	14.3	0.2	0.076	13.3	0.1	1.4	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
Sigma70_r4_2	PF08281.7	gi|15921535|ref|NP_377204.1|	-	0.038	13.4	0.1	0.12	11.8	0.0	1.9	2	0	0	2	2	1	0	Sigma-70,	region	4
Prim_Zn_Ribbon	PF08273.7	gi|15921535|ref|NP_377204.1|	-	0.043	13.8	3.4	0.12	12.4	2.4	1.7	1	1	0	1	1	1	0	Zinc-binding	domain	of	primase-helicase
HTH_10	PF04967.7	gi|15921535|ref|NP_377204.1|	-	0.046	13.3	2.2	8.9	5.9	0.0	3.0	3	0	0	3	3	3	0	HTH	DNA	binding	domain
GerE	PF00196.14	gi|15921535|ref|NP_377204.1|	-	0.053	12.8	2.4	0.079	12.2	0.2	2.2	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
Zn-ribbon_8	PF09723.5	gi|15921535|ref|NP_377204.1|	-	0.058	13.3	1.4	4.8	7.2	0.1	2.5	2	0	0	2	2	2	0	Zinc	ribbon	domain
HTH_24	PF13412.1	gi|15921535|ref|NP_377204.1|	-	0.069	12.5	0.5	0.53	9.7	0.1	2.5	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
DUF2089	PF09862.4	gi|15921535|ref|NP_377204.1|	-	0.12	12.2	0.7	0.55	10.0	0.0	2.4	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2089)
HTH_23	PF13384.1	gi|15921535|ref|NP_377204.1|	-	0.12	12.0	0.1	0.39	10.4	0.0	1.9	2	0	0	2	2	1	0	Homeodomain-like	domain
DNA_RNApol_7kD	PF03604.8	gi|15921535|ref|NP_377204.1|	-	0.16	11.4	2.3	6.1	6.4	0.1	2.5	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
TFIIS_C	PF01096.13	gi|15921535|ref|NP_377204.1|	-	0.26	10.9	2.1	9.5	5.9	0.1	2.4	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zinc_ribbon_5	PF13719.1	gi|15921535|ref|NP_377204.1|	-	0.36	10.4	1.5	5.6	6.6	0.2	2.6	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|15921535|ref|NP_377204.1|	-	0.39	10.2	6.6	6.5	6.3	4.6	2.2	1	1	0	1	1	1	0	zinc-ribbon	domain
UPF0547	PF10571.4	gi|15921535|ref|NP_377204.1|	-	3.1	7.5	5.6	30	4.4	3.9	2.2	1	1	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
DUF1610	PF07754.6	gi|15921535|ref|NP_377204.1|	-	8.8	6.5	8.3	20	5.4	1.8	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
Gar1	PF04410.9	gi|15921536|ref|NP_377205.1|	-	0.00019	20.9	0.0	0.0002	20.8	0.0	1.2	1	0	0	1	1	1	1	Gar1/Naf1	RNA	binding	region
PRC	PF05239.11	gi|15921536|ref|NP_377205.1|	-	0.0036	17.1	0.1	0.0053	16.5	0.1	1.3	1	0	0	1	1	1	1	PRC-barrel	domain
Reo_sigmaC	PF04582.7	gi|15921537|ref|NP_377206.1|	-	0.00086	18.5	9.8	0.1	11.7	1.0	2.3	1	1	0	2	2	2	2	Reovirus	sigma	C	capsid	protein
IncA	PF04156.9	gi|15921537|ref|NP_377206.1|	-	0.004	16.7	24.7	0.004	16.7	17.1	3.3	1	1	1	2	2	2	1	IncA	protein
EzrA	PF06160.7	gi|15921537|ref|NP_377206.1|	-	0.019	13.1	51.9	0.29	9.2	12.8	2.4	1	1	1	2	2	2	0	Septation	ring	formation	regulator,	EzrA
Spc7	PF08317.6	gi|15921537|ref|NP_377206.1|	-	0.17	10.5	73.3	0.57	8.7	21.9	3.2	1	1	2	3	3	3	0	Spc7	kinetochore	protein
CENP-F_leu_zip	PF10473.4	gi|15921537|ref|NP_377206.1|	-	0.25	11.2	74.4	0.15	11.9	20.1	3.5	1	1	1	3	3	3	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
MC1	PF05854.6	gi|15921537|ref|NP_377206.1|	-	0.74	9.8	8.6	1	9.4	0.2	3.2	2	1	1	3	3	3	0	Non-histone	chromosomal	protein	MC1
Hemerythrin	PF01814.18	gi|15921537|ref|NP_377206.1|	-	0.84	9.8	7.1	15	5.7	1.5	3.2	2	2	1	3	3	3	0	Hemerythrin	HHE	cation	binding	domain
DUF4530	PF15039.1	gi|15921537|ref|NP_377206.1|	-	0.87	9.5	13.8	1.5	8.7	2.3	2.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4530)
DUF3450	PF11932.3	gi|15921537|ref|NP_377206.1|	-	2.1	7.5	39.8	0.95	8.6	7.0	3.0	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF3450)
DUF948	PF06103.6	gi|15921537|ref|NP_377206.1|	-	3.2	7.6	29.4	0.21	11.4	4.6	4.3	1	1	4	5	5	5	0	Bacterial	protein	of	unknown	function	(DUF948)
DUF3584	PF12128.3	gi|15921537|ref|NP_377206.1|	-	3.2	4.9	59.6	6.3	3.9	21.0	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3584)
APG6	PF04111.7	gi|15921537|ref|NP_377206.1|	-	3.2	6.7	68.8	0.2	10.6	17.3	3.1	1	1	2	3	3	3	0	Autophagy	protein	Apg6
MCPsignal	PF00015.16	gi|15921537|ref|NP_377206.1|	-	3.3	7.1	26.5	0.94	8.9	5.6	2.6	1	1	0	2	2	2	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
RTBV_P46	PF06216.6	gi|15921537|ref|NP_377206.1|	-	4.5	5.9	32.0	0.038	12.8	5.4	3.3	1	1	2	4	4	4	0	Rice	tungro	bacilliform	virus	P46	protein
DUF1664	PF07889.7	gi|15921537|ref|NP_377206.1|	-	4.8	6.9	47.2	0.12	12.1	5.7	4.6	1	1	4	5	5	5	0	Protein	of	unknown	function	(DUF1664)
AAA_13	PF13166.1	gi|15921537|ref|NP_377206.1|	-	5.9	5.2	64.6	1.2	7.5	12.6	2.3	1	1	1	2	2	2	0	AAA	domain
Atg14	PF10186.4	gi|15921537|ref|NP_377206.1|	-	6.2	5.6	71.2	0.35	9.7	17.8	3.2	1	1	2	3	3	3	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
ApoO	PF09769.4	gi|15921537|ref|NP_377206.1|	-	8.4	6.0	19.1	9.9	5.8	3.6	2.8	2	1	0	2	2	2	0	Apolipoprotein	O
Mod_r	PF07200.8	gi|15921537|ref|NP_377206.1|	-	8.8	6.2	61.5	0.03	14.2	10.9	4.1	1	1	3	4	4	4	0	Modifier	of	rudimentary	(Mod(r))	protein
DUF373	PF04123.8	gi|15921538|ref|NP_377207.1|	-	6.4e-97	324.6	23.8	7.8e-97	324.3	16.5	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF373)
TBP	PF00352.16	gi|15921539|ref|NP_377208.1|	-	5.1e-60	198.8	0.3	1.5e-34	117.2	0.1	2.0	2	0	0	2	2	2	2	Transcription	factor	TFIID	(or	TATA-binding	protein,	TBP)
DUF3378	PF11858.3	gi|15921539|ref|NP_377208.1|	-	7e-05	22.8	0.0	0.44	10.6	0.0	2.4	2	1	0	2	2	2	2	Domain	of	unknown	function	(DUF3378)
Spore_YhaL	PF14147.1	gi|15921539|ref|NP_377208.1|	-	0.082	12.3	0.3	0.86	9.1	0.0	2.2	2	0	0	2	2	2	0	Sporulation	protein	YhaL
Metallophos	PF00149.23	gi|15921540|ref|NP_377209.1|	-	1.1e-07	31.4	2.2	1e-06	28.2	1.5	2.2	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|15921540|ref|NP_377209.1|	-	4.6e-05	23.3	0.1	9.2e-05	22.3	0.1	1.4	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
DUF792	PF05632.6	gi|15921540|ref|NP_377209.1|	-	0.0092	15.3	0.8	0.016	14.5	0.5	1.4	1	0	0	1	1	1	1	Borrelia	burgdorferi	protein	of	unknown	function	(DUF792)
TP_methylase	PF00590.15	gi|15921541|ref|NP_377210.1|	-	1.5e-21	77.0	0.0	2e-21	76.6	0.0	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
DUF357	PF04010.8	gi|15921542|ref|NP_377211.1|	-	5.5e-23	80.4	2.5	9e-23	79.7	0.7	2.2	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF357)
CTP_transf_2	PF01467.21	gi|15921542|ref|NP_377211.1|	-	8.8e-13	48.6	0.3	3.3e-12	46.7	0.2	1.9	1	1	0	1	1	1	1	Cytidylyltransferase
DUF883	PF05957.8	gi|15921542|ref|NP_377211.1|	-	0.056	13.8	0.2	0.47	10.8	0.0	2.3	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF883)
CTP-dep_RFKase	PF01982.11	gi|15921543|ref|NP_377212.1|	-	1.1e-42	144.4	0.0	1.3e-42	144.2	0.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF120
Antitoxin-MazE	PF04014.13	gi|15921543|ref|NP_377212.1|	-	0.025	14.2	0.6	0.11	12.3	0.0	2.3	2	0	0	2	2	2	0	Antidote-toxin	recognition	MazE
Wyosine_form	PF08608.7	gi|15921545|ref|NP_377214.1|	-	4.2e-23	81.2	0.0	7.9e-23	80.3	0.0	1.5	1	0	0	1	1	1	1	Wyosine	base	formation
Radical_SAM	PF04055.16	gi|15921545|ref|NP_377214.1|	-	1.5e-20	74.0	0.1	4e-20	72.6	0.1	1.7	1	1	0	1	1	1	1	Radical	SAM	superfamily
SF3a60_bindingd	PF12108.3	gi|15921545|ref|NP_377214.1|	-	2	8.0	4.6	0.71	9.4	0.7	2.1	2	0	0	2	2	2	0	Splicing	factor	SF3a60	binding	domain
Amidase	PF01425.16	gi|15921546|ref|NP_377215.1|	-	3e-138	461.4	0.0	3.4e-138	461.2	0.0	1.0	1	0	0	1	1	1	1	Amidase
DUF1453	PF07301.6	gi|15921547|ref|NP_377216.1|	-	0.78	9.5	7.9	0.62	9.9	4.6	1.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1453)
DUF3339	PF11820.3	gi|15921547|ref|NP_377216.1|	-	1.1	9.6	4.8	0.8	10.0	1.9	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3339)
Glu-tRNAGln	PF02686.10	gi|15921548|ref|NP_377217.1|	-	2.4e-21	75.2	0.1	3e-21	75.0	0.0	1.1	1	0	0	1	1	1	1	Glu-tRNAGln	amidotransferase	C	subunit
PhnI	PF05861.7	gi|15921548|ref|NP_377217.1|	-	0.086	11.3	0.0	0.095	11.2	0.0	1.1	1	0	0	1	1	1	0	Bacterial	phosphonate	metabolism	protein	(PhnI)
CutA1	PF03091.10	gi|15921549|ref|NP_377218.1|	-	8.3e-35	118.5	0.7	9.6e-35	118.3	0.5	1.0	1	0	0	1	1	1	1	CutA1	divalent	ion	tolerance	protein
RepA_N	PF06970.6	gi|15921550|ref|NP_377219.1|	-	0.018	14.8	2.9	0.034	13.9	2.0	1.5	1	1	0	1	1	1	0	Replication	initiator	protein	A	(RepA)	N-terminus
ResIII	PF04851.10	gi|15921551|ref|NP_377220.1|	-	1.1e-22	80.8	2.5	2e-22	79.8	0.1	2.5	2	1	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.26	gi|15921551|ref|NP_377220.1|	-	4.7e-18	64.8	0.0	1.5e-17	63.2	0.0	1.9	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
SNF2_N	PF00176.18	gi|15921551|ref|NP_377220.1|	-	8e-12	44.5	0.3	9.3e-11	41.0	0.0	2.2	1	1	1	2	2	2	1	SNF2	family	N-terminal	domain
DEAD	PF00270.24	gi|15921551|ref|NP_377220.1|	-	9.8e-11	41.4	0.2	9.5e-10	38.2	0.0	2.3	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
AAA_22	PF13401.1	gi|15921551|ref|NP_377220.1|	-	4.5e-06	26.8	1.5	0.00013	22.1	0.0	3.0	2	1	1	3	3	3	1	AAA	domain
DUF2075	PF09848.4	gi|15921551|ref|NP_377220.1|	-	2.2e-05	23.6	0.4	4e-05	22.7	0.2	1.4	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_11	PF13086.1	gi|15921551|ref|NP_377220.1|	-	0.01	15.4	1.0	5.1	6.5	0.0	3.1	2	1	1	3	3	3	0	AAA	domain
AAA_30	PF13604.1	gi|15921551|ref|NP_377220.1|	-	0.023	14.2	0.0	0.14	11.6	0.0	2.3	2	1	0	2	2	2	0	AAA	domain
Sigma70_ECF	PF07638.6	gi|15921551|ref|NP_377220.1|	-	0.035	13.7	0.1	0.065	12.8	0.0	1.4	1	0	0	1	1	1	0	ECF	sigma	factor
DUF748	PF05359.6	gi|15921551|ref|NP_377220.1|	-	0.085	12.8	0.0	0.27	11.2	0.0	1.8	2	0	0	2	2	2	0	Domain	of	Unknown	Function	(DUF748)
IstB_IS21	PF01695.12	gi|15921551|ref|NP_377220.1|	-	0.085	12.2	0.0	3.2	7.1	0.0	2.4	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
Helicase_RecD	PF05127.9	gi|15921551|ref|NP_377220.1|	-	0.11	12.1	0.4	0.37	10.4	0.0	2.0	2	1	0	2	2	2	0	Helicase
YjzC	PF14168.1	gi|15921553|ref|NP_377222.1|	-	0.0079	16.0	0.1	0.014	15.2	0.1	1.4	1	0	0	1	1	1	1	YjzC-like	protein
Alba	PF01918.16	gi|15921554|ref|NP_377223.1|	-	1.4e-19	69.4	0.6	1.8e-19	69.0	0.4	1.2	1	0	0	1	1	1	1	Alba
Topoisom_bac	PF01131.15	gi|15921555|ref|NP_377224.1|	-	1.4e-86	290.9	0.3	2.2e-86	290.2	0.2	1.3	1	0	0	1	1	1	1	DNA	topoisomerase
Toprim	PF01751.17	gi|15921555|ref|NP_377224.1|	-	4.1e-21	74.8	0.1	3.4e-20	71.8	0.0	2.6	2	0	0	2	2	2	1	Toprim	domain
DEAD	PF00270.24	gi|15921555|ref|NP_377224.1|	-	2.6e-09	36.7	0.0	1.6e-08	34.2	0.0	2.3	1	1	0	1	1	1	1	DEAD/DEAH	box	helicase
ResIII	PF04851.10	gi|15921555|ref|NP_377224.1|	-	1.8e-07	31.2	0.2	1.9e-05	24.6	0.0	2.6	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Toprim_4	PF13662.1	gi|15921555|ref|NP_377224.1|	-	0.00012	21.9	0.0	0.00036	20.4	0.0	1.8	1	0	0	1	1	1	1	Toprim	domain
AAA_22	PF13401.1	gi|15921555|ref|NP_377224.1|	-	0.0023	18.0	0.8	0.032	14.3	0.0	3.1	2	1	1	3	3	3	1	AAA	domain
zf-ribbon_3	PF13248.1	gi|15921555|ref|NP_377224.1|	-	0.0082	15.3	9.7	0.16	11.2	3.5	2.5	2	0	0	2	2	2	2	zinc-ribbon	domain
zf-RING_3	PF14369.1	gi|15921555|ref|NP_377224.1|	-	0.01	15.8	1.5	0.01	15.8	1.0	2.4	2	0	0	2	2	2	0	zinc-finger
FYVE	PF01363.16	gi|15921555|ref|NP_377224.1|	-	0.03	14.2	0.2	0.17	11.8	0.0	2.0	2	0	0	2	2	2	0	FYVE	zinc	finger
zinc_ribbon_2	PF13240.1	gi|15921555|ref|NP_377224.1|	-	0.038	13.4	15.9	0.25	10.8	3.9	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
DZR	PF12773.2	gi|15921555|ref|NP_377224.1|	-	0.16	11.8	8.1	0.07	12.9	0.8	2.3	2	0	0	2	2	2	0	Double	zinc	ribbon
zf-C3HC4_3	PF13920.1	gi|15921555|ref|NP_377224.1|	-	0.46	10.2	2.4	0.52	10.0	0.5	1.9	2	0	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
zf-C2H2_4	PF13894.1	gi|15921555|ref|NP_377224.1|	-	0.97	9.9	3.0	29	5.3	0.0	3.2	2	0	0	2	2	2	0	C2H2-type	zinc	finger
Prok-RING_1	PF14446.1	gi|15921555|ref|NP_377224.1|	-	5.3	6.8	5.6	7.5	6.3	0.6	2.3	2	0	0	2	2	2	0	Prokaryotic	RING	finger	family	1
zf-C2HC5	PF06221.8	gi|15921555|ref|NP_377224.1|	-	5.7	6.7	7.3	0.15	11.8	0.5	1.8	2	0	0	2	2	1	0	Putative	zinc	finger	motif,	C2HC5-type
Alba	PF01918.16	gi|15921556|ref|NP_377225.1|	-	2.2e-12	46.3	0.1	2.7e-12	46.0	0.0	1.2	1	0	0	1	1	1	1	Alba
DEAD	PF00270.24	gi|15921557|ref|NP_377226.1|	-	1.3e-30	106.0	0.0	4.9e-30	104.2	0.0	1.9	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
DEAD_assoc	PF08494.6	gi|15921557|ref|NP_377226.1|	-	2.2e-21	76.4	0.0	1.9e-20	73.4	0.0	2.3	1	1	0	1	1	1	1	DEAD/H	associated
Helicase_C	PF00271.26	gi|15921557|ref|NP_377226.1|	-	5e-13	48.7	0.0	2.4e-12	46.5	0.0	2.1	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|15921557|ref|NP_377226.1|	-	5.7e-06	26.2	0.0	1.5e-05	24.8	0.0	1.7	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
HTH_Crp_2	PF13545.1	gi|15921557|ref|NP_377226.1|	-	0.0004	20.1	1.0	2.6	7.8	0.0	3.9	3	0	0	3	3	3	1	Crp-like	helix-turn-helix	domain
HTH_20	PF12840.2	gi|15921557|ref|NP_377226.1|	-	0.00056	19.6	0.0	0.0016	18.2	0.0	1.8	1	0	0	1	1	1	1	Helix-turn-helix	domain
SNF2_N	PF00176.18	gi|15921557|ref|NP_377226.1|	-	0.0024	16.7	0.0	0.0046	15.7	0.0	1.4	1	0	0	1	1	1	1	SNF2	family	N-terminal	domain
UvrD-helicase	PF00580.16	gi|15921557|ref|NP_377226.1|	-	0.0042	16.4	0.1	1.1	8.5	0.0	2.9	2	2	0	3	3	3	1	UvrD/REP	helicase	N-terminal	domain
HTH_24	PF13412.1	gi|15921557|ref|NP_377226.1|	-	0.025	13.9	0.1	0.1	11.9	0.1	2.2	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
HTH_3	PF01381.17	gi|15921557|ref|NP_377226.1|	-	0.028	14.2	0.3	0.6	9.9	0.1	2.9	2	0	0	2	2	2	0	Helix-turn-helix
HTH_5	PF01022.15	gi|15921557|ref|NP_377226.1|	-	0.038	13.6	0.1	0.1	12.2	0.1	1.7	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
LacI	PF00356.16	gi|15921557|ref|NP_377226.1|	-	0.04	13.5	0.2	1.4	8.5	0.0	3.3	3	0	0	3	3	3	0	Bacterial	regulatory	proteins,	lacI	family
AAA_25	PF13481.1	gi|15921557|ref|NP_377226.1|	-	0.068	12.5	0.0	0.17	11.2	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_11	PF13086.1	gi|15921557|ref|NP_377226.1|	-	0.19	11.2	0.4	1.3	8.5	0.0	2.4	2	1	1	3	3	3	0	AAA	domain
HTH_17	PF12728.2	gi|15921557|ref|NP_377226.1|	-	0.33	11.2	0.1	0.33	11.2	0.1	3.7	4	0	0	4	4	4	0	Helix-turn-helix	domain
RtcB	PF01139.12	gi|15921558|ref|NP_377227.1|	-	6.9e-151	502.9	0.2	7.7e-151	502.8	0.1	1.0	1	0	0	1	1	1	1	tRNA-splicing	ligase	RtcB
DS	PF01916.12	gi|15921559|ref|NP_377228.1|	-	5.5e-84	281.8	0.2	6.6e-84	281.5	0.2	1.0	1	0	0	1	1	1	1	Deoxyhypusine	synthase
Topo-VIb_trans	PF09239.6	gi|15921560|ref|NP_377229.1|	-	2.7e-67	225.3	0.3	4.9e-67	224.4	0.2	1.4	1	0	0	1	1	1	1	Topoisomerase	VI	B	subunit,	transducer
HATPase_c	PF02518.21	gi|15921560|ref|NP_377229.1|	-	4.9e-12	45.5	0.0	8.8e-12	44.7	0.0	1.4	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c_3	PF13589.1	gi|15921560|ref|NP_377229.1|	-	1.9e-11	43.7	0.0	4.3e-11	42.6	0.0	1.6	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
FbpA	PF05833.6	gi|15921560|ref|NP_377229.1|	-	9.7e-06	24.3	0.0	9.7e-06	24.3	0.0	2.4	2	1	0	2	2	2	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
Ribosomal_S13	PF00416.17	gi|15921560|ref|NP_377229.1|	-	0.0025	18.2	1.4	0.0046	17.3	0.0	2.1	3	0	0	3	3	3	1	Ribosomal	protein	S13/S18
TP6A_N	PF04406.9	gi|15921561|ref|NP_377230.1|	-	1.5e-23	82.1	0.2	3.2e-23	81.1	0.1	1.6	1	0	0	1	1	1	1	Type	IIB	DNA	topoisomerase
DUF2399	PF09664.5	gi|15921561|ref|NP_377230.1|	-	0.038	13.8	0.0	0.068	13.0	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	C-terminus	(DUF2399)
HAD_2	PF13419.1	gi|15921561|ref|NP_377230.1|	-	0.058	13.6	0.0	0.12	12.6	0.0	1.5	1	0	0	1	1	1	0	Haloacid	dehalogenase-like	hydrolase
eIF-5a	PF01287.15	gi|15921562|ref|NP_377231.1|	-	1.1e-15	57.3	0.8	2e-15	56.4	0.5	1.5	1	0	0	1	1	1	1	Eukaryotic	elongation	factor	5A	hypusine,	DNA-binding	OB	fold
EFP_N	PF08207.7	gi|15921562|ref|NP_377231.1|	-	8.9e-07	28.6	0.1	2.2e-06	27.4	0.0	1.7	2	0	0	2	2	2	1	Elongation	factor	P	(EF-P)	KOW-like	domain
KOW	PF00467.24	gi|15921562|ref|NP_377231.1|	-	0.00014	21.3	1.3	0.00037	20.1	0.5	2.1	2	0	0	2	2	2	1	KOW	motif
EFP	PF01132.15	gi|15921562|ref|NP_377231.1|	-	0.011	15.3	0.0	0.022	14.4	0.0	1.5	1	0	0	1	1	1	0	Elongation	factor	P	(EF-P)	OB	domain
MacB_PCD	PF12704.2	gi|15921562|ref|NP_377231.1|	-	0.07	12.7	0.2	0.74	9.3	0.0	1.9	1	1	1	2	2	2	0	MacB-like	periplasmic	core	domain
UL11	PF11094.3	gi|15921562|ref|NP_377231.1|	-	0.15	11.8	0.1	0.29	10.9	0.1	1.4	1	0	0	1	1	1	0	Membrane-associated	tegument	protein
SRP54	PF00448.17	gi|60623872|ref|NP_377232.2|	-	2.9e-73	245.4	0.1	4.6e-73	244.8	0.1	1.3	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SRP_SPB	PF02978.14	gi|60623872|ref|NP_377232.2|	-	2.8e-35	120.7	4.7	2.1e-33	114.6	0.2	2.5	1	1	1	2	2	2	2	Signal	peptide	binding	domain
SRP54_N	PF02881.14	gi|60623872|ref|NP_377232.2|	-	3.9e-11	42.8	1.0	3.9e-11	42.8	0.7	3.2	3	0	0	3	3	3	1	SRP54-type	protein,	helical	bundle	domain
CbiA	PF01656.18	gi|60623872|ref|NP_377232.2|	-	2.4e-07	30.3	0.3	1e-06	28.3	0.2	2.1	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
cobW	PF02492.14	gi|60623872|ref|NP_377232.2|	-	1.1e-05	24.9	0.2	9.7e-05	21.8	0.1	2.4	2	1	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_33	PF13671.1	gi|60623872|ref|NP_377232.2|	-	3.3e-05	23.8	0.0	7.4e-05	22.6	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
MobB	PF03205.9	gi|60623872|ref|NP_377232.2|	-	5.3e-05	22.9	0.5	0.00017	21.3	0.3	1.9	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Zeta_toxin	PF06414.7	gi|60623872|ref|NP_377232.2|	-	0.00021	20.4	0.0	0.00044	19.3	0.0	1.5	1	0	0	1	1	1	1	Zeta	toxin
AAA_22	PF13401.1	gi|60623872|ref|NP_377232.2|	-	0.00082	19.5	0.1	0.0036	17.4	0.0	2.1	3	0	0	3	3	1	1	AAA	domain
AAA_31	PF13614.1	gi|60623872|ref|NP_377232.2|	-	0.0012	18.7	0.0	0.49	10.3	0.0	2.8	2	0	0	2	2	2	1	AAA	domain
ArgK	PF03308.11	gi|60623872|ref|NP_377232.2|	-	0.0018	17.0	0.4	0.0056	15.4	0.3	1.8	1	1	0	1	1	1	1	ArgK	protein
AAA_18	PF13238.1	gi|60623872|ref|NP_377232.2|	-	0.0034	17.6	1.8	0.0074	16.5	0.2	2.5	2	1	0	2	2	2	1	AAA	domain
ArsA_ATPase	PF02374.10	gi|60623872|ref|NP_377232.2|	-	0.0064	15.5	0.4	9.4	5.1	0.1	3.5	3	0	0	3	3	3	0	Anion-transporting	ATPase
AAA_17	PF13207.1	gi|60623872|ref|NP_377232.2|	-	0.0076	17.0	2.1	0.016	16.0	0.6	2.3	2	1	0	2	2	1	1	AAA	domain
AAA_10	PF12846.2	gi|60623872|ref|NP_377232.2|	-	0.016	14.6	0.1	0.051	12.9	0.0	1.8	2	0	0	2	2	2	0	AAA-like	domain
AAA_30	PF13604.1	gi|60623872|ref|NP_377232.2|	-	0.022	14.3	0.8	0.078	12.5	0.5	2.0	1	1	0	1	1	1	0	AAA	domain
APS_kinase	PF01583.15	gi|60623872|ref|NP_377232.2|	-	0.044	13.4	0.1	0.12	12.0	0.0	1.7	2	0	0	2	2	2	0	Adenylylsulphate	kinase
6PF2K	PF01591.13	gi|60623872|ref|NP_377232.2|	-	0.061	12.3	0.0	0.14	11.1	0.0	1.6	1	0	0	1	1	1	0	6-phosphofructo-2-kinase
AAA_28	PF13521.1	gi|60623872|ref|NP_377232.2|	-	0.065	13.1	0.0	0.12	12.2	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
ATP_bind_1	PF03029.12	gi|60623872|ref|NP_377232.2|	-	0.066	12.7	1.1	0.15	11.5	0.2	2.2	2	1	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
MipZ	PF09140.6	gi|60623872|ref|NP_377232.2|	-	0.1	11.6	0.1	2.1	7.3	0.1	2.3	1	1	0	1	1	1	0	ATPase	MipZ
NACHT	PF05729.7	gi|60623872|ref|NP_377232.2|	-	0.18	11.4	0.5	0.37	10.4	0.4	1.5	1	0	0	1	1	1	0	NACHT	domain
AAA	PF00004.24	gi|60623872|ref|NP_377232.2|	-	1	9.5	6.0	2.3	8.4	0.4	3.5	2	1	1	3	3	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Thymidylate_kin	PF02223.12	gi|60623872|ref|NP_377232.2|	-	1.5	8.1	7.4	0.67	9.3	0.5	3.3	4	1	1	5	5	4	0	Thymidylate	kinase
adh_short_C2	PF13561.1	gi|15921565|ref|NP_377234.1|	-	1.7e-29	103.2	0.0	2.1e-29	103.0	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|15921565|ref|NP_377234.1|	-	6.9e-17	61.8	0.0	8.8e-17	61.5	0.0	1.2	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|15921565|ref|NP_377234.1|	-	3e-05	23.7	0.0	4.7e-05	23.1	0.0	1.3	1	0	0	1	1	1	1	KR	domain
DUF1776	PF08643.5	gi|15921565|ref|NP_377234.1|	-	0.0032	16.6	0.1	0.0065	15.6	0.1	1.5	2	0	0	2	2	2	1	Fungal	family	of	unknown	function	(DUF1776)
NAD_binding_10	PF13460.1	gi|15921565|ref|NP_377234.1|	-	0.0035	17.3	0.0	0.0097	15.9	0.0	1.7	1	1	0	1	1	1	1	NADH(P)-binding
F420_oxidored	PF03807.12	gi|15921565|ref|NP_377234.1|	-	0.013	15.9	0.0	0.032	14.6	0.0	1.6	2	0	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
HHH_5	PF14520.1	gi|15921565|ref|NP_377234.1|	-	0.021	14.9	0.0	0.052	13.7	0.0	1.7	1	0	0	1	1	1	0	Helix-hairpin-helix	domain
Shikimate_DH	PF01488.15	gi|15921565|ref|NP_377234.1|	-	0.024	14.7	0.0	0.043	13.9	0.0	1.5	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
Polysacc_synt_2	PF02719.10	gi|15921565|ref|NP_377234.1|	-	0.045	12.6	0.2	0.1	11.5	0.0	1.6	2	0	0	2	2	2	0	Polysaccharide	biosynthesis	protein
Saccharop_dh	PF03435.13	gi|15921565|ref|NP_377234.1|	-	0.05	12.5	0.0	0.077	11.9	0.0	1.2	1	0	0	1	1	1	0	Saccharopine	dehydrogenase
THF_DHG_CYH_C	PF02882.14	gi|15921565|ref|NP_377234.1|	-	0.11	11.5	0.1	0.2	10.6	0.1	1.4	1	0	0	1	1	1	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
2-Hacid_dh_C	PF02826.14	gi|15921565|ref|NP_377234.1|	-	0.12	11.5	0.0	0.2	10.7	0.0	1.4	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
AA_kinase	PF00696.23	gi|15921566|ref|NP_377235.1|	-	2.6e-35	122.1	0.1	3.1e-35	121.8	0.1	1.1	1	0	0	1	1	1	1	Amino	acid	kinase	family
CBM_X2	PF03442.9	gi|15921566|ref|NP_377235.1|	-	0.054	13.3	0.6	0.12	12.2	0.1	1.7	2	0	0	2	2	2	0	Carbohydrate	binding	domain	X2
DUF188	PF02639.9	gi|15921566|ref|NP_377235.1|	-	0.054	12.9	0.2	0.18	11.2	0.0	1.9	2	0	0	2	2	2	0	Uncharacterized	BCR,	YaiI/YqxD	family	COG1671
HMGL-like	PF00682.14	gi|15921567|ref|NP_377236.1|	-	6.7e-66	222.3	3.6	7.5e-66	222.1	1.9	1.5	2	0	0	2	2	2	1	HMGL-like
AsnC_trans_reg	PF01037.16	gi|15921567|ref|NP_377236.1|	-	1.1e-17	63.4	0.6	5.2e-16	58.1	0.1	3.2	3	0	0	3	3	3	1	AsnC	family
ACT_4	PF13291.1	gi|15921567|ref|NP_377236.1|	-	9.9e-06	25.8	2.2	0.021	15.1	0.0	4.8	5	0	0	5	5	5	1	ACT	domain
Spt5-NGN	PF03439.8	gi|15921567|ref|NP_377236.1|	-	0.0069	16.1	0.4	0.41	10.4	0.0	2.6	2	0	0	2	2	2	1	Early	transcription	elongation	factor	of	RNA	pol	II,	NGN	section
NapD	PF03927.8	gi|15921567|ref|NP_377236.1|	-	0.01	15.6	1.8	0.02	14.7	0.2	2.4	2	0	0	2	2	2	0	NapD	protein
Glyco_hydro_97	PF10566.4	gi|15921567|ref|NP_377236.1|	-	0.012	14.7	0.0	0.022	13.8	0.0	1.3	1	0	0	1	1	1	0	Glycoside	hydrolase	97
AP_endonuc_2	PF01261.19	gi|15921567|ref|NP_377236.1|	-	0.028	13.6	0.4	0.16	11.2	0.1	2.2	1	1	1	2	2	2	0	Xylose	isomerase-like	TIM	barrel
PIN	PF01850.16	gi|15921568|ref|NP_377237.1|	-	9.5e-05	22.7	0.0	9.9e-05	22.6	0.0	1.1	1	0	0	1	1	1	1	PIN	domain
DUF2404	PF10296.4	gi|15921568|ref|NP_377237.1|	-	0.059	13.5	0.2	0.064	13.3	0.1	1.1	1	0	0	1	1	1	0	Putative	integral	membrane	protein	conserved	region	(DUF2404)
DUF217	PF02697.9	gi|15921569|ref|NP_377238.1|	-	0.0032	17.6	0.2	0.0032	17.6	0.1	2.3	1	1	1	2	2	2	1	Uncharacterized	ACR,	COG1753
CcdA	PF07362.7	gi|15921569|ref|NP_377238.1|	-	0.0079	16.0	0.1	0.028	14.2	0.1	1.9	1	1	0	1	1	1	1	Post-segregation	antitoxin	CcdA
Peptidase_M91	PF14891.1	gi|15921569|ref|NP_377238.1|	-	0.008	16.2	0.1	0.0087	16.1	0.1	1.2	1	0	0	1	1	1	1	Effector	protein
RHH_1	PF01402.16	gi|15921569|ref|NP_377238.1|	-	0.012	15.4	0.7	0.28	11.1	0.2	2.8	2	1	0	2	2	2	0	Ribbon-helix-helix	protein,	copG	family
DUF1241	PF06840.6	gi|15921569|ref|NP_377238.1|	-	0.099	11.8	0.6	0.12	11.5	0.2	1.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1241)
DUF4256	PF14066.1	gi|15921569|ref|NP_377238.1|	-	0.13	11.7	0.1	0.13	11.7	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4256)
Rib_5-P_isom_A	PF06026.9	gi|15921570|ref|NP_377239.1|	-	8.5e-35	119.6	0.3	1.2e-34	119.0	0.2	1.2	1	0	0	1	1	1	1	Ribose	5-phosphate	isomerase	A	(phosphoriboisomerase	A)
DeoRC	PF00455.17	gi|15921570|ref|NP_377239.1|	-	0.014	14.9	0.0	0.023	14.3	0.0	1.3	1	0	0	1	1	1	0	DeoR	C	terminal	sensor	domain
DUF2067	PF09840.4	gi|15921570|ref|NP_377239.1|	-	0.02	14.3	0.7	5.4	6.4	0.0	2.3	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2067)
B12-binding	PF02310.14	gi|15921570|ref|NP_377239.1|	-	0.05	13.4	0.0	0.09	12.6	0.0	1.5	1	0	0	1	1	1	0	B12	binding	domain
UPRTase	PF14681.1	gi|15921570|ref|NP_377239.1|	-	0.057	12.6	0.0	0.091	11.9	0.0	1.3	1	0	0	1	1	1	0	Uracil	phosphoribosyltransferase
Sugar-bind	PF04198.8	gi|15921570|ref|NP_377239.1|	-	0.066	12.1	0.0	0.096	11.5	0.0	1.2	1	0	0	1	1	1	0	Putative	sugar-binding	domain
PaREP1	PF05942.6	gi|15921572|ref|NP_377241.1|	-	3.7e-31	107.3	7.7	5.9e-31	106.7	5.4	1.3	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
DUF357	PF04010.8	gi|15921572|ref|NP_377241.1|	-	6.8e-05	22.4	1.5	0.00017	21.2	0.4	2.2	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF357)
DUF585	PF04522.7	gi|15921572|ref|NP_377241.1|	-	0.017	14.5	0.3	0.023	14.1	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF585)
RGS	PF00615.14	gi|15921572|ref|NP_377241.1|	-	0.078	13.0	0.2	0.13	12.3	0.1	1.3	1	0	0	1	1	1	0	Regulator	of	G	protein	signaling	domain
DUF1027	PF06265.6	gi|15921572|ref|NP_377241.1|	-	0.28	11.0	3.0	2.6	7.9	0.7	2.7	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1027)
HEPN	PF05168.9	gi|15921572|ref|NP_377241.1|	-	0.44	10.4	5.7	1.2	9.0	3.5	2.0	1	1	0	1	1	1	0	HEPN	domain
SRP54_N	PF02881.14	gi|15921572|ref|NP_377241.1|	-	1	9.4	4.5	16	5.6	0.0	3.3	3	1	0	3	3	3	0	SRP54-type	protein,	helical	bundle	domain
Sulfolobus_pRN	PF05584.6	gi|15921574|ref|NP_377243.1|	-	1.5e-36	124.2	6.1	1.6e-36	124.0	4.2	1.0	1	0	0	1	1	1	1	Sulfolobus	plasmid	regulatory	protein
HTH_20	PF12840.2	gi|15921574|ref|NP_377243.1|	-	0.0012	18.5	0.1	0.0017	18.1	0.1	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
ArsR	PF09824.4	gi|15921574|ref|NP_377243.1|	-	0.0033	16.7	0.0	0.0037	16.6	0.0	1.1	1	0	0	1	1	1	1	ArsR	transcriptional	regulator
MarR	PF01047.17	gi|15921574|ref|NP_377243.1|	-	0.0081	15.8	0.4	0.012	15.2	0.2	1.5	1	1	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|15921574|ref|NP_377243.1|	-	0.019	14.6	0.1	0.024	14.3	0.1	1.1	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
TFIIE_alpha	PF02002.12	gi|15921574|ref|NP_377243.1|	-	0.024	14.1	0.4	0.025	14.0	0.3	1.1	1	0	0	1	1	1	0	TFIIE	alpha	subunit
HTH_24	PF13412.1	gi|15921574|ref|NP_377243.1|	-	0.029	13.7	0.7	0.041	13.2	0.5	1.3	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
HTH_IclR	PF09339.5	gi|15921574|ref|NP_377243.1|	-	0.063	12.8	0.5	0.083	12.4	0.3	1.2	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_5	PF01022.15	gi|15921574|ref|NP_377243.1|	-	0.063	12.9	0.2	0.087	12.5	0.1	1.2	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
HxlR	PF01638.12	gi|15921574|ref|NP_377243.1|	-	0.1	12.2	0.8	0.11	12.1	0.6	1.1	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
HapK	PF11639.3	gi|15921575|ref|NP_377244.1|	-	0.034	14.7	0.0	0.097	13.3	0.0	1.8	1	0	0	1	1	1	0	REDY-like	protein	HapK
PsbJ	PF01788.12	gi|15921576|ref|NP_377245.1|	-	6	6.4	12.5	2.7	7.6	4.2	2.8	2	1	1	3	3	3	0	PsbJ
Arv1	PF04161.8	gi|15921576|ref|NP_377245.1|	-	6.4	6.6	10.2	0.74	9.6	1.9	2.4	2	1	0	2	2	2	0	Arv1-like	family
DEAD_2	PF06733.10	gi|15921578|ref|NP_377247.1|	-	6.1e-27	94.1	0.7	1.7e-26	92.7	0.5	1.8	1	0	0	1	1	1	1	DEAD_2
Helicase_C_2	PF13307.1	gi|15921578|ref|NP_377247.1|	-	1.3e-26	93.5	0.0	2e-25	89.6	0.0	2.2	2	0	0	2	2	2	1	Helicase	C-terminal	domain
ResIII	PF04851.10	gi|15921578|ref|NP_377247.1|	-	6e-07	29.4	0.2	1.6e-06	28.1	0.2	1.7	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
DEAD	PF00270.24	gi|15921578|ref|NP_377247.1|	-	3.4e-05	23.4	0.7	0.072	12.5	0.0	3.2	3	0	0	3	3	3	2	DEAD/DEAH	box	helicase
SNF2_N	PF00176.18	gi|15921578|ref|NP_377247.1|	-	0.0032	16.3	0.2	0.039	12.7	0.0	2.3	2	0	0	2	2	2	1	SNF2	family	N-terminal	domain
AAA_19	PF13245.1	gi|15921578|ref|NP_377247.1|	-	0.0033	17.1	0.0	0.0074	16.0	0.0	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_22	PF13401.1	gi|15921578|ref|NP_377247.1|	-	0.0048	17.0	0.2	2.9	8.0	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
UPF0079	PF02367.12	gi|15921578|ref|NP_377247.1|	-	0.051	13.1	0.8	0.16	11.5	0.1	2.1	2	0	0	2	2	2	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA	PF00004.24	gi|15921578|ref|NP_377247.1|	-	0.21	11.7	1.0	4.1	7.6	0.1	2.6	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ParBc	PF02195.13	gi|15921579|ref|NP_377248.1|	-	5.6e-15	55.2	0.4	1.9e-14	53.5	0.0	2.2	2	0	0	2	2	2	1	ParB-like	nuclease	domain
DUF1462	PF07315.6	gi|15921579|ref|NP_377248.1|	-	0.21	11.5	0.1	0.21	11.5	0.1	2.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1462)
Cwf_Cwc_15	PF04889.7	gi|15921579|ref|NP_377248.1|	-	1.1	8.9	25.5	0.27	10.9	11.6	2.2	2	0	0	2	2	2	0	Cwf15/Cwc15	cell	cycle	control	protein
MarR_2	PF12802.2	gi|15921581|ref|NP_377250.1|	-	0.00053	19.6	0.0	0.00071	19.1	0.0	1.2	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|15921581|ref|NP_377250.1|	-	0.0014	18.3	0.1	0.0018	17.9	0.0	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|15921581|ref|NP_377250.1|	-	0.0041	16.4	0.0	0.0087	15.4	0.0	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_34	PF13601.1	gi|15921581|ref|NP_377250.1|	-	0.0042	17.0	0.1	0.0067	16.4	0.1	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR	PF01047.17	gi|15921581|ref|NP_377250.1|	-	0.0075	15.9	0.0	0.01	15.5	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_11	PF08279.7	gi|15921581|ref|NP_377250.1|	-	0.013	15.1	0.4	0.02	14.5	0.0	1.6	2	0	0	2	2	2	0	HTH	domain
Rrf2	PF02082.15	gi|15921581|ref|NP_377250.1|	-	0.024	14.7	0.0	0.033	14.2	0.0	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_27	PF13463.1	gi|15921581|ref|NP_377250.1|	-	0.044	14.1	0.0	0.058	13.7	0.0	1.2	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
TFIIE_alpha	PF02002.12	gi|15921581|ref|NP_377250.1|	-	0.048	13.1	0.1	0.056	12.9	0.1	1.1	1	0	0	1	1	1	0	TFIIE	alpha	subunit
RHH_3	PF12651.2	gi|15921581|ref|NP_377250.1|	-	0.07	12.8	0.1	0.18	11.5	0.1	1.7	1	0	0	1	1	1	0	Ribbon-helix-helix	domain
DUF2250	PF10007.4	gi|15921581|ref|NP_377250.1|	-	0.094	12.6	0.3	0.26	11.2	0.2	1.6	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_27	PF13463.1	gi|15921582|ref|NP_377251.1|	-	5.1e-07	29.9	0.2	7.7e-07	29.3	0.1	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|15921582|ref|NP_377251.1|	-	9e-06	25.3	1.7	1.4e-05	24.6	0.9	1.5	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|15921582|ref|NP_377251.1|	-	0.0014	18.2	0.1	0.0053	16.4	0.1	1.9	1	1	0	1	1	1	1	MarR	family
HTH_24	PF13412.1	gi|15921582|ref|NP_377251.1|	-	0.002	17.4	1.1	0.0047	16.2	0.8	1.7	1	1	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HxlR	PF01638.12	gi|15921582|ref|NP_377251.1|	-	0.0039	16.7	0.3	0.0051	16.4	0.2	1.2	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
Fe_dep_repress	PF01325.14	gi|15921582|ref|NP_377251.1|	-	0.0078	16.1	0.5	0.1	12.5	0.1	2.5	2	1	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
PadR	PF03551.9	gi|15921582|ref|NP_377251.1|	-	0.0098	15.6	0.4	0.014	15.1	0.3	1.3	1	1	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_34	PF13601.1	gi|15921582|ref|NP_377251.1|	-	0.012	15.5	0.3	0.021	14.8	0.2	1.4	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
DUF4393	PF14337.1	gi|15921582|ref|NP_377251.1|	-	0.021	14.2	0.1	0.023	14.1	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4393)
DUF387	PF04079.11	gi|15921582|ref|NP_377251.1|	-	0.025	13.9	0.1	0.032	13.5	0.1	1.3	1	0	0	1	1	1	0	Putative	transcriptional	regulators	(Ypuh-like)
HTH_45	PF14947.1	gi|15921582|ref|NP_377251.1|	-	0.027	14.2	0.4	0.078	12.8	0.3	1.8	1	1	0	1	1	1	0	Winged	helix-turn-helix
NusB	PF01029.13	gi|15921582|ref|NP_377251.1|	-	0.043	13.7	0.4	0.07	13.1	0.2	1.5	1	1	1	2	2	2	0	NusB	family
MarR	PF01047.17	gi|15921582|ref|NP_377251.1|	-	0.082	12.6	0.1	0.14	11.8	0.1	1.5	1	1	0	1	1	1	0	MarR	family
DUF3940	PF13076.1	gi|15921582|ref|NP_377251.1|	-	0.091	12.3	0.5	13	5.4	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3940)
Rio2_N	PF09202.6	gi|15921582|ref|NP_377251.1|	-	0.11	12.5	0.0	0.2	11.7	0.0	1.3	1	0	0	1	1	1	0	Rio2,	N-terminal
HTH_20	PF12840.2	gi|15921582|ref|NP_377251.1|	-	0.14	11.9	0.1	0.23	11.2	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
SWIM	PF04434.12	gi|15921583|ref|NP_377252.1|	-	0.028	13.8	0.3	0.043	13.2	0.2	1.2	1	0	0	1	1	1	0	SWIM	zinc	finger
DUF1371	PF07115.6	gi|15921586|ref|NP_377255.1|	-	0.12	12.5	0.5	0.15	12.2	0.3	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1371)
DUF1286	PF06939.6	gi|15921587|ref|NP_377256.1|	-	3.8e-47	159.1	6.5	3.8e-47	159.1	4.5	1.7	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1286)
DUF457	PF04307.9	gi|15921587|ref|NP_377256.1|	-	0.0064	15.8	16.1	0.28	10.4	11.2	2.1	1	1	0	1	1	1	1	Predicted	membrane-bound	metal-dependent	hydrolase	(DUF457)
TrmB	PF01978.14	gi|15921588|ref|NP_377257.1|	-	3.7e-05	23.3	0.2	4.8e-05	22.9	0.1	1.1	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
DUF4423	PF14394.1	gi|15921588|ref|NP_377257.1|	-	0.0019	17.7	0.0	0.0023	17.4	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
Rrf2	PF02082.15	gi|15921588|ref|NP_377257.1|	-	0.02	15.0	0.1	0.034	14.2	0.0	1.4	2	0	0	2	2	2	0	Transcriptional	regulator
Phage_rep_org_N	PF09681.5	gi|15921588|ref|NP_377257.1|	-	0.022	14.3	0.2	0.025	14.1	0.1	1.1	1	0	0	1	1	1	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
HTH_20	PF12840.2	gi|15921588|ref|NP_377257.1|	-	0.028	14.2	0.0	0.25	11.1	0.0	1.9	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|15921588|ref|NP_377257.1|	-	0.033	13.8	0.0	0.05	13.2	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.1	gi|15921588|ref|NP_377257.1|	-	0.034	13.5	0.9	0.15	11.4	0.1	2.1	1	1	1	2	2	2	0	Winged	helix-turn-helix	DNA-binding
HTH_25	PF13413.1	gi|15921588|ref|NP_377257.1|	-	0.035	13.7	0.1	0.059	13.0	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
Sulfolobus_pRN	PF05584.6	gi|15921588|ref|NP_377257.1|	-	0.061	13.2	0.3	0.14	12.0	0.0	1.6	1	1	1	2	2	2	0	Sulfolobus	plasmid	regulatory	protein
HTH_AsnC-type	PF13404.1	gi|15921588|ref|NP_377257.1|	-	0.11	12.0	0.3	0.35	10.4	0.0	1.9	2	1	0	2	2	2	0	AsnC-type	helix-turn-helix	domain
HTH_23	PF13384.1	gi|15921588|ref|NP_377257.1|	-	0.12	12.0	0.0	0.2	11.3	0.0	1.4	1	0	0	1	1	1	0	Homeodomain-like	domain
AAA_10	PF12846.2	gi|15921589|ref|NP_377258.1|	-	4.1e-38	131.5	0.2	5.8e-38	131.0	0.1	1.2	1	0	0	1	1	1	1	AAA-like	domain
DUF87	PF01935.12	gi|15921589|ref|NP_377258.1|	-	1e-09	38.5	0.0	4.9e-09	36.3	0.0	2.0	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF87
AAA_22	PF13401.1	gi|15921589|ref|NP_377258.1|	-	4.6e-05	23.5	0.0	0.038	14.1	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|15921589|ref|NP_377258.1|	-	0.00016	21.2	0.0	0.00037	20.0	0.0	1.6	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
T2SE	PF00437.15	gi|15921589|ref|NP_377258.1|	-	0.00033	19.6	0.1	0.0018	17.2	0.0	2.0	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
TrwB_AAD_bind	PF10412.4	gi|15921589|ref|NP_377258.1|	-	0.0023	16.6	0.0	0.43	9.1	0.0	2.4	2	0	0	2	2	2	2	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
DUF853	PF05872.7	gi|15921589|ref|NP_377258.1|	-	0.0046	15.3	0.0	0.077	11.3	0.0	2.1	2	0	0	2	2	2	1	Bacterial	protein	of	unknown	function	(DUF853)
Pox_A32	PF04665.7	gi|15921589|ref|NP_377258.1|	-	0.0067	15.7	0.0	0.013	14.8	0.0	1.4	1	0	0	1	1	1	1	Poxvirus	A32	protein
AAA_5	PF07728.9	gi|15921589|ref|NP_377258.1|	-	0.0073	16.0	0.2	0.15	11.7	0.0	2.7	3	0	0	3	3	3	1	AAA	domain	(dynein-related	subfamily)
ABC_tran	PF00005.22	gi|15921589|ref|NP_377258.1|	-	0.022	15.0	0.0	0.076	13.3	0.0	1.9	2	0	0	2	2	2	0	ABC	transporter
Sigma54_activat	PF00158.21	gi|15921589|ref|NP_377258.1|	-	0.027	13.9	0.0	0.11	11.9	0.0	2.0	2	0	0	2	2	2	0	Sigma-54	interaction	domain
AAA_32	PF13654.1	gi|15921589|ref|NP_377258.1|	-	0.11	11.1	0.4	0.27	9.8	0.1	1.7	2	0	0	2	2	2	0	AAA	domain
AAA	PF00004.24	gi|15921589|ref|NP_377258.1|	-	0.11	12.6	0.5	0.45	10.7	0.1	2.2	3	0	0	3	3	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Mg_chelatase	PF01078.16	gi|15921589|ref|NP_377258.1|	-	0.2	10.7	0.0	0.81	8.8	0.0	1.9	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
PrgI	PF12666.2	gi|15921590|ref|NP_377259.1|	-	0.04	14.0	8.2	0.43	10.7	0.9	2.2	2	0	0	2	2	2	0	PrgI	family	protein
Steroid_dh	PF02544.11	gi|15921590|ref|NP_377259.1|	-	0.052	13.3	0.4	0.13	12.0	0.0	1.8	2	0	0	2	2	2	0	3-oxo-5-alpha-steroid	4-dehydrogenase
Cad	PF03596.8	gi|15921590|ref|NP_377259.1|	-	0.083	12.5	6.9	2.2	7.9	1.8	2.2	2	0	0	2	2	2	0	Cadmium	resistance	transporter
DUF2157	PF09925.4	gi|15921590|ref|NP_377259.1|	-	0.11	12.0	0.2	0.11	12.0	0.1	2.3	2	1	1	3	3	3	0	Predicted	membrane	protein	(DUF2157)
Glycophorin_A	PF01102.13	gi|15921590|ref|NP_377259.1|	-	0.21	11.3	0.6	0.43	10.3	0.1	1.8	2	0	0	2	2	2	0	Glycophorin	A
Patched	PF02460.13	gi|15921590|ref|NP_377259.1|	-	0.97	7.2	6.2	1.4	6.7	4.3	1.2	1	0	0	1	1	1	0	Patched	family
DUF4229	PF14012.1	gi|15921590|ref|NP_377259.1|	-	1.2	9.0	6.4	0.76	9.7	0.6	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4229)
Stork_head	PF10264.4	gi|15921595|ref|NP_377264.1|	-	0.032	14.4	0.1	0.05	13.7	0.0	1.3	1	1	0	1	1	1	0	Winged	helix	Storkhead-box1	domain
AF2331-like	PF14556.1	gi|15921595|ref|NP_377264.1|	-	0.082	13.2	0.1	0.1	12.9	0.1	1.1	1	0	0	1	1	1	0	AF2331-like
GAT	PF03127.9	gi|15921595|ref|NP_377264.1|	-	0.12	12.3	0.2	0.15	12.0	0.1	1.3	1	1	0	1	1	1	0	GAT	domain
Myosin_tail_1	PF01576.14	gi|15921596|ref|NP_377265.1|	-	0.027	12.2	0.2	0.027	12.2	0.1	1.0	1	0	0	1	1	1	0	Myosin	tail
HTH_27	PF13463.1	gi|15921597|ref|NP_377266.1|	-	2.4e-06	27.7	0.0	3.1e-06	27.4	0.0	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_24	PF13412.1	gi|15921597|ref|NP_377266.1|	-	1e-05	24.7	0.1	1.9e-05	23.9	0.0	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_34	PF13601.1	gi|15921597|ref|NP_377266.1|	-	1.4e-05	25.0	0.4	1.6e-05	24.8	0.3	1.1	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
PadR	PF03551.9	gi|15921597|ref|NP_377266.1|	-	3.1e-05	23.6	0.1	5.1e-05	22.9	0.1	1.4	1	1	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
TrmB	PF01978.14	gi|15921597|ref|NP_377266.1|	-	0.0001	21.9	1.7	0.00033	20.2	1.2	1.8	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HxlR	PF01638.12	gi|15921597|ref|NP_377266.1|	-	0.00017	21.1	0.3	0.00018	21.0	0.2	1.2	1	1	0	1	1	1	1	HxlR-like	helix-turn-helix
MarR_2	PF12802.2	gi|15921597|ref|NP_377266.1|	-	0.00017	21.1	0.0	0.00024	20.7	0.0	1.2	1	0	0	1	1	1	1	MarR	family
GntR	PF00392.16	gi|15921597|ref|NP_377266.1|	-	0.00059	19.2	0.2	0.0011	18.3	0.0	1.5	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	gntR	family
HTH_45	PF14947.1	gi|15921597|ref|NP_377266.1|	-	0.00064	19.4	1.1	0.0009	19.0	0.7	1.5	1	1	0	1	1	1	1	Winged	helix-turn-helix
MarR	PF01047.17	gi|15921597|ref|NP_377266.1|	-	0.002	17.8	0.1	0.0026	17.4	0.1	1.2	1	0	0	1	1	1	1	MarR	family
LexA_DNA_bind	PF01726.11	gi|15921597|ref|NP_377266.1|	-	0.0025	17.3	0.4	0.065	12.8	0.1	2.7	2	1	0	2	2	2	1	LexA	DNA	binding	domain
DUF1495	PF07381.6	gi|15921597|ref|NP_377266.1|	-	0.0037	16.9	0.5	0.053	13.2	0.3	2.0	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain	(DUF1495)
DUF2250	PF10007.4	gi|15921597|ref|NP_377266.1|	-	0.0042	16.9	0.6	0.0094	15.8	0.4	1.6	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Phage_rep_org_N	PF09681.5	gi|15921597|ref|NP_377266.1|	-	0.0056	16.2	0.1	0.0077	15.7	0.0	1.3	1	0	0	1	1	1	1	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
DUF4364	PF14277.1	gi|15921597|ref|NP_377266.1|	-	0.023	14.3	0.2	0.028	14.0	0.1	1.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4364)
HTH_11	PF08279.7	gi|15921597|ref|NP_377266.1|	-	0.026	14.1	1.0	0.036	13.7	0.1	1.7	2	1	0	2	2	2	0	HTH	domain
Ribosomal_S19e	PF01090.14	gi|15921597|ref|NP_377266.1|	-	0.03	13.7	0.0	0.04	13.3	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	protein	S19e
MCRS_N	PF13325.1	gi|15921597|ref|NP_377266.1|	-	0.046	13.2	0.2	0.054	13.0	0.1	1.1	1	0	0	1	1	1	0	N-terminal	region	of	micro-spherule	protein
DUF4423	PF14394.1	gi|15921597|ref|NP_377266.1|	-	0.06	12.8	0.2	0.066	12.7	0.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
RPA_C	PF08784.6	gi|15921597|ref|NP_377266.1|	-	0.063	13.6	0.0	0.094	13.1	0.0	1.3	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
HTH_36	PF13730.1	gi|15921597|ref|NP_377266.1|	-	0.079	13.1	0.1	0.22	11.6	0.0	1.8	2	0	0	2	2	2	0	Helix-turn-helix	domain
Mrr_N	PF14338.1	gi|15921597|ref|NP_377266.1|	-	0.084	12.9	0.2	0.11	12.5	0.2	1.4	1	1	0	1	1	1	0	Mrr	N-terminal	domain
Nsp1	PF11501.3	gi|15921597|ref|NP_377266.1|	-	0.1	12.4	0.0	0.11	12.3	0.0	1.2	1	0	0	1	1	1	0	Non	structural	protein	Nsp1
HTH_20	PF12840.2	gi|15921597|ref|NP_377266.1|	-	0.13	12.1	0.0	0.18	11.6	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|15921598|ref|NP_377267.1|	-	2.3e-05	24.4	0.4	3.8e-05	23.7	0.3	1.3	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_11	PF08279.7	gi|15921598|ref|NP_377267.1|	-	6e-05	22.6	0.6	0.00011	21.7	0.4	1.5	1	0	0	1	1	1	1	HTH	domain
MarR	PF01047.17	gi|15921598|ref|NP_377267.1|	-	9.2e-05	22.0	0.2	0.00016	21.3	0.1	1.3	1	0	0	1	1	1	1	MarR	family
GntR	PF00392.16	gi|15921598|ref|NP_377267.1|	-	0.00046	19.5	0.1	0.0008	18.8	0.1	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
TrmB	PF01978.14	gi|15921598|ref|NP_377267.1|	-	0.00077	19.1	0.5	0.0012	18.5	0.4	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_34	PF13601.1	gi|15921598|ref|NP_377267.1|	-	0.0017	18.3	0.7	0.0022	17.9	0.5	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_24	PF13412.1	gi|15921598|ref|NP_377267.1|	-	0.0019	17.5	1.4	0.0031	16.8	0.9	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.2	gi|15921598|ref|NP_377267.1|	-	0.0019	17.8	0.0	0.0031	17.1	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_5	PF01022.15	gi|15921598|ref|NP_377267.1|	-	0.0021	17.6	0.4	0.004	16.7	0.3	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_Crp_2	PF13545.1	gi|15921598|ref|NP_377267.1|	-	0.0046	16.7	0.1	0.0066	16.2	0.1	1.3	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
PadR	PF03551.9	gi|15921598|ref|NP_377267.1|	-	0.0065	16.2	0.1	0.0082	15.8	0.1	1.3	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
Fe_dep_repress	PF01325.14	gi|15921598|ref|NP_377267.1|	-	0.0073	16.2	0.2	0.012	15.4	0.1	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
S10_plectin	PF03501.10	gi|15921598|ref|NP_377267.1|	-	0.01	15.6	0.4	0.041	13.7	0.3	1.8	1	1	0	1	1	1	0	Plectin/S10	domain
HrcA_DNA-bdg	PF03444.10	gi|15921598|ref|NP_377267.1|	-	0.031	13.7	0.7	0.064	12.6	0.5	1.5	1	0	0	1	1	1	0	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
DUF2250	PF10007.4	gi|15921598|ref|NP_377267.1|	-	0.035	14.0	1.2	0.058	13.2	0.8	1.4	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
YjcQ	PF09639.5	gi|15921598|ref|NP_377267.1|	-	0.039	14.0	0.1	0.05	13.6	0.1	1.1	1	0	0	1	1	1	0	YjcQ	protein
Penicillinase_R	PF03965.11	gi|15921598|ref|NP_377267.1|	-	0.041	13.9	1.4	0.084	12.9	0.3	1.8	2	0	0	2	2	2	0	Penicillinase	repressor
TBPIP	PF07106.8	gi|15921598|ref|NP_377267.1|	-	0.067	12.7	4.2	0.11	12.0	2.9	1.5	1	1	0	1	1	1	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
HTH_20	PF12840.2	gi|15921598|ref|NP_377267.1|	-	0.074	12.8	0.0	0.11	12.3	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
Phage_rep_org_N	PF09681.5	gi|15921598|ref|NP_377267.1|	-	0.076	12.5	1.0	0.082	12.4	0.7	1.2	1	0	0	1	1	1	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
HTH_45	PF14947.1	gi|15921598|ref|NP_377267.1|	-	0.082	12.7	1.9	0.44	10.3	1.3	1.9	1	1	0	1	1	1	0	Winged	helix-turn-helix
TFIIE_alpha	PF02002.12	gi|15921598|ref|NP_377267.1|	-	0.11	11.9	4.2	0.14	11.7	2.9	1.3	1	1	0	1	1	1	0	TFIIE	alpha	subunit
HTH_29	PF13551.1	gi|15921598|ref|NP_377267.1|	-	0.12	12.5	0.2	0.96	9.6	0.0	1.9	1	1	0	2	2	2	0	Winged	helix-turn	helix
ParBc	PF02195.13	gi|15921599|ref|NP_377268.1|	-	1.6e-09	37.7	0.0	6.4e-09	35.8	0.0	2.1	1	0	0	1	1	1	1	ParB-like	nuclease	domain
HisKA_2	PF07568.7	gi|15921599|ref|NP_377268.1|	-	0.049	13.4	0.9	0.4	10.5	0.1	3.0	3	0	0	3	3	3	0	Histidine	kinase
AAA_21	PF13304.1	gi|15921599|ref|NP_377268.1|	-	1.3	8.8	13.0	0.94	9.3	1.8	2.5	1	1	0	2	2	2	0	AAA	domain
VSG_B	PF13206.1	gi|15921599|ref|NP_377268.1|	-	5	6.1	13.4	1.8	7.6	4.0	2.4	1	1	1	2	2	2	0	Trypanosomal	VSG	domain
CbiA	PF01656.18	gi|15921600|ref|NP_377269.1|	-	5.1e-28	97.8	0.0	6.9e-28	97.3	0.0	1.1	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ArsA_ATPase	PF02374.10	gi|15921600|ref|NP_377269.1|	-	1.4e-10	40.7	0.0	2.4e-10	39.9	0.0	1.3	1	0	0	1	1	1	1	Anion-transporting	ATPase
AAA_31	PF13614.1	gi|15921600|ref|NP_377269.1|	-	1.3e-09	38.1	0.1	2.3e-05	24.3	0.0	2.5	3	0	0	3	3	3	2	AAA	domain
MipZ	PF09140.6	gi|15921600|ref|NP_377269.1|	-	2.5e-06	26.7	0.1	0.011	14.7	0.0	2.1	2	0	0	2	2	2	2	ATPase	MipZ
YhjQ	PF06564.7	gi|15921600|ref|NP_377269.1|	-	1.1e-05	24.9	0.0	0.00014	21.2	0.0	2.2	2	0	0	2	2	2	1	YhjQ	protein
Fer4_NifH	PF00142.13	gi|15921600|ref|NP_377269.1|	-	0.0027	16.9	0.0	0.025	13.7	0.0	2.0	2	0	0	2	2	2	1	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
VirC1	PF07015.6	gi|15921600|ref|NP_377269.1|	-	0.01	14.9	0.0	0.69	8.9	0.0	2.4	3	0	0	3	3	3	0	VirC1	protein
AAA_18	PF13238.1	gi|15921600|ref|NP_377269.1|	-	0.15	12.3	0.3	1.2	9.3	0.0	2.5	2	2	1	3	3	3	0	AAA	domain
HGD-D	PF06050.8	gi|15921601|ref|NP_377270.1|	-	0.011	14.6	0.0	0.011	14.5	0.0	1.1	1	0	0	1	1	1	0	2-hydroxyglutaryl-CoA	dehydratase,	D-component
DUF2393	PF09624.5	gi|15921602|ref|NP_377271.1|	-	0.0044	16.5	0.9	0.0065	16.0	0.7	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2393)
DUF4143	PF13635.1	gi|15921603|ref|NP_377272.1|	-	1.9e-09	37.5	0.1	3.7e-09	36.6	0.1	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
AAA_14	PF13173.1	gi|15921603|ref|NP_377272.1|	-	0.00027	20.8	1.5	0.0012	18.7	0.0	2.6	3	0	0	3	3	3	1	AAA	domain
DUF1703	PF08011.6	gi|15921603|ref|NP_377272.1|	-	0.011	15.4	0.3	0.029	14.0	0.1	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1703)
Ku_PK_bind	PF08785.6	gi|15921603|ref|NP_377272.1|	-	0.039	13.8	0.1	0.099	12.5	0.1	1.6	1	0	0	1	1	1	0	Ku	C	terminal	domain	like
RHH_1	PF01402.16	gi|15921604|ref|NP_377273.1|	-	4.2e-05	23.2	0.6	0.00013	21.6	0.0	2.1	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
RHH_4	PF13467.1	gi|15921604|ref|NP_377273.1|	-	0.00014	21.6	0.0	0.00019	21.2	0.0	1.5	1	1	0	1	1	1	1	Ribbon-helix-helix	domain
EcoR124_C	PF12008.3	gi|15921604|ref|NP_377273.1|	-	0.0011	18.1	1.2	0.0015	17.8	0.8	1.0	1	0	0	1	1	1	1	Type	I	restriction	and	modification	enzyme	-	subunit	R	C	terminal
RepB-RCR_reg	PF10723.4	gi|15921604|ref|NP_377273.1|	-	0.0015	18.2	0.1	0.0023	17.6	0.0	1.3	1	0	0	1	1	1	1	Replication	regulatory	protein	RepB
Lebercilin	PF15619.1	gi|15921604|ref|NP_377273.1|	-	0.0074	15.7	1.0	0.01	15.2	0.7	1.4	1	1	0	1	1	1	1	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
RHH_3	PF12651.2	gi|15921604|ref|NP_377273.1|	-	0.019	14.7	0.2	0.044	13.5	0.2	1.6	1	0	0	1	1	1	0	Ribbon-helix-helix	domain
NAD_binding_11	PF14833.1	gi|15921604|ref|NP_377273.1|	-	0.025	14.6	0.0	0.031	14.3	0.0	1.1	1	0	0	1	1	1	0	NAD-binding	of	NADP-dependent	3-hydroxyisobutyrate	dehydrogenase
NAAA-beta	PF15508.1	gi|15921604|ref|NP_377273.1|	-	0.032	14.5	0.2	1.6	9.1	0.0	2.1	2	0	0	2	2	2	0	beta	subunit	of	N-acylethanolamine-hydrolyzing	acid	amidase
bZIP_1	PF00170.16	gi|15921604|ref|NP_377273.1|	-	0.041	13.8	0.4	0.041	13.8	0.3	1.7	2	0	0	2	2	2	0	bZIP	transcription	factor
Leu_zip	PF15294.1	gi|15921604|ref|NP_377273.1|	-	0.042	12.9	1.0	0.046	12.8	0.7	1.1	1	0	0	1	1	1	0	Leucine	zipper
Bacillus_HBL	PF05791.6	gi|15921604|ref|NP_377273.1|	-	0.043	13.1	0.3	0.049	12.9	0.2	1.1	1	0	0	1	1	1	0	Bacillus	haemolytic	enterotoxin	(HBL)
Prefoldin_2	PF01920.15	gi|15921604|ref|NP_377273.1|	-	0.053	13.2	2.3	0.089	12.5	1.6	1.5	1	1	0	1	1	1	0	Prefoldin	subunit
DUF4294	PF14127.1	gi|15921604|ref|NP_377273.1|	-	0.083	12.4	1.2	0.17	11.4	0.2	1.7	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4294)
FCH	PF00611.18	gi|15921604|ref|NP_377273.1|	-	0.94	9.7	3.7	3.8	7.7	2.5	1.9	1	1	0	1	1	1	0	Fes/CIP4,	and	EFC/F-BAR	homology	domain
UvsW	PF11637.3	gi|15921604|ref|NP_377273.1|	-	2.9	7.6	6.3	0.82	9.3	0.2	2.3	2	0	0	2	2	2	0	ATP-dependant	DNA	helicase	UvsW
Lon_2	PF13337.1	gi|15921605|ref|NP_377274.1|	-	0.031	12.6	0.1	0.034	12.4	0.1	1.0	1	0	0	1	1	1	0	Putative	ATP-dependent	Lon	protease
AAA_10	PF12846.2	gi|15921608|ref|NP_377277.1|	-	1.2e-21	77.4	1.0	3e-21	76.1	0.0	2.1	2	1	0	2	2	2	1	AAA-like	domain
TrwB_AAD_bind	PF10412.4	gi|15921608|ref|NP_377277.1|	-	3.3e-11	42.4	0.1	2.1e-05	23.3	0.0	2.4	2	0	0	2	2	2	2	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
DUF87	PF01935.12	gi|15921608|ref|NP_377277.1|	-	1.4e-09	38.1	9.0	3.8e-09	36.7	0.0	3.7	4	0	0	4	4	3	1	Domain	of	unknown	function	DUF87
TraG-D_C	PF12696.2	gi|15921608|ref|NP_377277.1|	-	4e-06	26.7	0.0	1.2e-05	25.1	0.0	1.8	1	0	0	1	1	1	1	TraM	recognition	site	of	TraD	and	TraG
FtsK_SpoIIIE	PF01580.13	gi|15921608|ref|NP_377277.1|	-	5.8e-06	25.9	0.1	2.9e-05	23.6	0.0	2.2	3	0	0	3	3	3	1	FtsK/SpoIIIE	family
AAA_22	PF13401.1	gi|15921608|ref|NP_377277.1|	-	8e-05	22.7	0.3	0.031	14.3	0.0	3.4	3	0	0	3	3	3	1	AAA	domain
Pox_A32	PF04665.7	gi|15921608|ref|NP_377277.1|	-	0.00075	18.8	0.0	0.00075	18.8	0.0	2.6	3	0	0	3	3	3	1	Poxvirus	A32	protein
MarR_2	PF12802.2	gi|15921608|ref|NP_377277.1|	-	0.00089	18.8	0.0	0.0026	17.4	0.0	1.8	1	0	0	1	1	1	1	MarR	family
PaaX	PF07848.7	gi|15921608|ref|NP_377277.1|	-	0.0068	16.3	0.0	0.019	14.9	0.0	1.8	1	0	0	1	1	1	1	PaaX-like	protein
HTH_36	PF13730.1	gi|15921608|ref|NP_377277.1|	-	0.012	15.7	0.1	0.082	13.0	0.0	2.5	2	0	0	2	2	2	0	Helix-turn-helix	domain
DUF2249	PF10006.4	gi|15921608|ref|NP_377277.1|	-	0.012	15.1	0.0	1.4	8.5	0.0	2.7	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2249)
HTH_24	PF13412.1	gi|15921608|ref|NP_377277.1|	-	0.015	14.6	0.0	0.042	13.2	0.0	1.8	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.14	gi|15921608|ref|NP_377277.1|	-	0.017	14.8	0.5	0.049	13.3	0.1	2.0	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
DUF853	PF05872.7	gi|15921608|ref|NP_377277.1|	-	0.029	12.7	2.0	0.055	11.8	0.0	2.0	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF853)
ABC_tran	PF00005.22	gi|15921608|ref|NP_377277.1|	-	0.033	14.4	3.4	0.061	13.6	0.0	2.7	2	1	0	2	2	2	0	ABC	transporter
HTH_27	PF13463.1	gi|15921608|ref|NP_377277.1|	-	0.14	12.5	1.3	0.91	9.8	0.0	2.9	3	0	0	3	3	3	0	Winged	helix	DNA-binding	domain
AAA_19	PF13245.1	gi|15921608|ref|NP_377277.1|	-	0.16	11.7	0.0	0.48	10.2	0.0	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
Elongin_A	PF06881.6	gi|15921608|ref|NP_377277.1|	-	0.29	11.5	7.2	12	6.2	2.6	2.9	2	0	0	2	2	2	0	RNA	polymerase	II	transcription	factor	SIII	(Elongin)	subunit	A
DUF4407	PF14362.1	gi|15921608|ref|NP_377277.1|	-	0.32	9.8	6.1	0.56	9.1	4.3	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
Sulfolobus_pRN	PF05584.6	gi|15921609|ref|NP_377278.1|	-	0.0076	16.1	2.0	0.0076	16.1	1.4	1.9	2	0	0	2	2	2	1	Sulfolobus	plasmid	regulatory	protein
YmgB	PF10798.3	gi|15921609|ref|NP_377278.1|	-	0.083	12.7	0.2	0.083	12.7	0.2	1.8	2	0	0	2	2	2	0	Biofilm	development	protein	YmgB/AriR
PaaX	PF07848.7	gi|15921609|ref|NP_377278.1|	-	0.11	12.5	0.1	0.19	11.7	0.1	1.4	1	0	0	1	1	1	0	PaaX-like	protein
RNA_pol_Rpb1_5	PF04998.12	gi|15921609|ref|NP_377278.1|	-	0.74	9.0	3.5	0.93	8.7	2.4	1.1	1	0	0	1	1	1	0	RNA	polymerase	Rpb1,	domain	5
PLDc_2	PF13091.1	gi|15921611|ref|NP_377280.1|	-	9e-16	57.7	0.0	1.6e-15	56.9	0.0	1.4	1	0	0	1	1	1	1	PLD-like	domain
Thioredoxin_6	PF13848.1	gi|15921612|ref|NP_377281.1|	-	0.0078	16.0	0.1	0.015	15.1	0.1	1.5	1	1	0	1	1	1	1	Thioredoxin-like	domain
DUF3883	PF13020.1	gi|15921614|ref|NP_377283.1|	-	0.02	14.6	0.0	0.027	14.1	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3883)
AAA_21	PF13304.1	gi|15921616|ref|NP_377285.1|	-	8.4	6.2	16.8	2	8.3	1.0	2.3	1	1	1	2	2	2	0	AAA	domain
Radical_SAM	PF04055.16	gi|15921617|ref|NP_377286.1|	-	2.7e-15	56.9	0.0	9.7e-14	51.8	0.0	2.3	2	1	1	3	3	3	2	Radical	SAM	superfamily
HTH_27	PF13463.1	gi|15921620|ref|NP_377289.1|	-	0.0001	22.5	0.0	0.00015	22.0	0.0	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_45	PF14947.1	gi|15921620|ref|NP_377289.1|	-	0.00027	20.7	0.7	0.00084	19.1	0.1	1.8	1	1	1	2	2	2	1	Winged	helix-turn-helix
RuvB_C	PF05491.8	gi|15921620|ref|NP_377289.1|	-	0.0005	19.6	0.0	0.0008	18.9	0.0	1.4	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	C-terminus
DUF4423	PF14394.1	gi|15921620|ref|NP_377289.1|	-	0.0083	15.6	0.0	0.016	14.7	0.0	1.5	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
Mrr_N	PF14338.1	gi|15921620|ref|NP_377289.1|	-	0.031	14.3	0.1	0.1	12.7	0.0	1.8	1	1	1	2	2	2	0	Mrr	N-terminal	domain
TrmB	PF01978.14	gi|15921620|ref|NP_377289.1|	-	0.044	13.4	0.0	0.078	12.6	0.0	1.4	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
MotA_activ	PF09114.5	gi|15921620|ref|NP_377289.1|	-	0.054	13.2	0.0	0.077	12.7	0.0	1.3	1	0	0	1	1	1	0	Transcription	factor	MotA,	activation	domain
HTH_5	PF01022.15	gi|15921620|ref|NP_377289.1|	-	0.095	12.3	0.0	0.14	11.8	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
HTH_27	PF13463.1	gi|15921621|ref|NP_377290.1|	-	1.4e-05	25.2	0.0	2.4e-05	24.5	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_24	PF13412.1	gi|15921621|ref|NP_377290.1|	-	1.6e-05	24.1	1.1	3.1e-05	23.2	0.0	2.0	3	0	0	3	3	3	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.14	gi|15921621|ref|NP_377290.1|	-	1.7e-05	24.4	0.1	3.5e-05	23.4	0.0	1.6	1	1	1	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
RPA_C	PF08784.6	gi|15921621|ref|NP_377290.1|	-	2.4e-05	24.6	0.0	4.4e-05	23.8	0.0	1.3	1	0	0	1	1	1	1	Replication	protein	A	C	terminal
MarR_2	PF12802.2	gi|15921621|ref|NP_377290.1|	-	7.6e-05	22.2	0.0	0.00012	21.6	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_34	PF13601.1	gi|15921621|ref|NP_377290.1|	-	0.0019	18.1	0.0	0.0045	16.9	0.0	1.6	1	1	1	2	2	2	1	Winged	helix	DNA-binding	domain
DUF2250	PF10007.4	gi|15921621|ref|NP_377290.1|	-	0.007	16.2	0.1	0.053	13.4	0.0	2.0	2	0	0	2	2	2	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF4393	PF14337.1	gi|15921621|ref|NP_377290.1|	-	0.013	14.8	0.3	0.018	14.5	0.2	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4393)
Rrf2	PF02082.15	gi|15921621|ref|NP_377290.1|	-	0.02	14.9	0.0	0.1	12.7	0.0	2.0	2	1	0	2	2	2	0	Transcriptional	regulator
HTH_36	PF13730.1	gi|15921621|ref|NP_377290.1|	-	0.022	14.8	0.0	0.04	14.0	0.0	1.6	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_45	PF14947.1	gi|15921621|ref|NP_377290.1|	-	0.031	14.0	0.2	0.045	13.5	0.2	1.4	1	1	0	1	1	1	0	Winged	helix-turn-helix
HTH_9	PF08221.6	gi|15921621|ref|NP_377290.1|	-	0.034	14.0	0.0	0.064	13.1	0.0	1.5	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
STN1_2	PF09170.5	gi|15921621|ref|NP_377290.1|	-	0.042	13.6	0.2	0.087	12.5	0.1	1.5	1	1	0	1	1	1	0	CST,	Suppressor	of	cdc	thirteen	homolog,	complex	subunit	STN1
TFIIE_alpha	PF02002.12	gi|15921621|ref|NP_377290.1|	-	0.042	13.3	0.8	0.066	12.7	0.5	1.3	1	1	0	1	1	1	0	TFIIE	alpha	subunit
HxlR	PF01638.12	gi|15921621|ref|NP_377290.1|	-	0.058	13.0	0.1	0.084	12.5	0.0	1.3	1	1	0	1	1	1	0	HxlR-like	helix-turn-helix
DUF2774	PF11242.3	gi|15921621|ref|NP_377290.1|	-	0.073	13.0	0.0	0.14	12.1	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2774)
APG17	PF04108.7	gi|15921621|ref|NP_377290.1|	-	0.078	11.7	0.2	0.09	11.5	0.2	1.1	1	0	0	1	1	1	0	Autophagy	protein	Apg17
DUF3920	PF13058.1	gi|15921623|ref|NP_377292.1|	-	0.0013	18.4	0.6	0.0016	18.2	0.4	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3920)
DUF2935	PF11155.3	gi|15921623|ref|NP_377292.1|	-	0.23	11.5	2.5	0.37	10.9	1.7	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF2935)
Orbi_VP5	PF00901.12	gi|15921623|ref|NP_377292.1|	-	0.38	8.8	2.8	0.41	8.7	2.0	1.1	1	0	0	1	1	1	0	Orbivirus	outer	capsid	protein	VP5
Latarcin	PF10279.4	gi|15921623|ref|NP_377292.1|	-	0.52	10.5	4.2	1.9	8.7	2.9	1.9	1	1	0	1	1	1	0	Latarcin	precursor
YpjP	PF14005.1	gi|15921625|ref|NP_377294.1|	-	0.023	14.4	0.4	0.026	14.2	0.3	1.0	1	0	0	1	1	1	0	YpjP-like	protein
COG2	PF06148.6	gi|15921625|ref|NP_377294.1|	-	0.063	13.1	0.2	0.079	12.8	0.1	1.3	1	0	0	1	1	1	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
DUF2408	PF10303.4	gi|15921625|ref|NP_377294.1|	-	0.072	13.2	0.4	0.099	12.7	0.3	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2408)
Cut8_C	PF08559.5	gi|15921625|ref|NP_377294.1|	-	0.1	12.4	0.2	0.11	12.3	0.1	1.2	1	0	0	1	1	1	0	Cut8	six-helix	bundle
Apis_Csd	PF11671.3	gi|15921625|ref|NP_377294.1|	-	0.11	12.2	1.0	0.13	12.0	0.5	1.2	1	1	0	1	1	1	0	Complementary	sex	determiner	protein
RPT	PF13446.1	gi|15921625|ref|NP_377294.1|	-	0.2	11.0	2.1	9.5	5.7	0.1	2.4	1	1	1	2	2	2	0	A	repeated	domain	in	UCH-protein
DUF1947	PF09183.5	gi|15921625|ref|NP_377294.1|	-	0.79	9.5	3.4	1.3	8.7	2.3	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1947)
SWIM	PF04434.12	gi|15921626|ref|NP_377295.1|	-	0.08	12.4	1.9	0.16	11.5	1.3	1.5	1	0	0	1	1	1	0	SWIM	zinc	finger
RHH_1	PF01402.16	gi|15921628|ref|NP_377297.1|	-	2.6e-07	30.2	0.6	3.7e-07	29.7	0.4	1.3	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
G-gamma	PF00631.17	gi|15921628|ref|NP_377297.1|	-	0.014	15.1	0.2	0.019	14.6	0.1	1.2	1	0	0	1	1	1	0	GGL	domain
DUF2088	PF09861.4	gi|15921628|ref|NP_377297.1|	-	0.051	12.5	0.0	0.059	12.3	0.0	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF2088)
DUF904	PF06005.7	gi|15921629|ref|NP_377298.1|	-	1.2e-22	79.9	17.7	1.4e-22	79.7	12.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF904)
DUF972	PF06156.8	gi|15921629|ref|NP_377298.1|	-	0.00052	20.3	13.3	0.004	17.4	9.2	2.2	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF972)
DUF4201	PF13870.1	gi|15921629|ref|NP_377298.1|	-	0.0011	18.3	14.5	0.0014	18.0	10.1	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4201)
SlyX	PF04102.7	gi|15921629|ref|NP_377298.1|	-	0.0013	19.0	13.0	0.0022	18.2	6.0	2.1	1	1	1	2	2	2	1	SlyX
APG6	PF04111.7	gi|15921629|ref|NP_377298.1|	-	0.0033	16.5	14.8	0.0037	16.3	10.3	1.0	1	0	0	1	1	1	1	Autophagy	protein	Apg6
Vinculin	PF01044.14	gi|15921629|ref|NP_377298.1|	-	0.0039	15.2	5.8	0.0041	15.2	4.0	1.0	1	0	0	1	1	1	1	Vinculin	family
CCDC155	PF14662.1	gi|15921629|ref|NP_377298.1|	-	0.0048	16.5	10.1	0.0062	16.1	7.0	1.3	1	0	0	1	1	1	1	Coiled-coil	region	of	CCDC155
DivIC	PF04977.10	gi|15921629|ref|NP_377298.1|	-	0.008	15.6	9.0	0.008	15.6	6.2	2.8	1	1	2	3	3	3	1	Septum	formation	initiator
CENP-H	PF05837.7	gi|15921629|ref|NP_377298.1|	-	0.0094	16.1	10.9	0.012	15.7	7.4	1.4	1	1	0	1	1	1	1	Centromere	protein	H	(CENP-H)
IncA	PF04156.9	gi|15921629|ref|NP_377298.1|	-	0.014	15.0	14.5	0.02	14.4	10.1	1.2	1	1	0	1	1	1	0	IncA	protein
Kdo_hydroxy	PF11004.3	gi|15921629|ref|NP_377298.1|	-	0.017	14.1	2.9	0.019	13.9	2.0	1.1	1	0	0	1	1	1	0	3-deoxy-D-manno-oct-2-ulosonic	acid	(Kdo)	hydroxylase
DUF3560	PF12083.3	gi|15921629|ref|NP_377298.1|	-	0.02	14.9	5.6	0.86	9.6	1.2	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3560)
She2p	PF11435.3	gi|15921629|ref|NP_377298.1|	-	0.022	14.1	2.9	0.026	13.9	2.0	1.0	1	0	0	1	1	1	0	RNA	binding	protein	She2p
DUF948	PF06103.6	gi|15921629|ref|NP_377298.1|	-	0.029	14.2	4.5	0.03	14.1	1.8	1.9	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
Sec8_exocyst	PF04048.9	gi|15921629|ref|NP_377298.1|	-	0.03	13.9	8.2	0.074	12.6	5.7	1.7	1	1	0	1	1	1	0	Sec8	exocyst	complex	component	specific	domain
MerR_2	PF13591.1	gi|15921629|ref|NP_377298.1|	-	0.03	13.8	0.5	0.03	13.8	0.3	2.6	3	0	0	3	3	2	0	MerR	HTH	family	regulatory	protein
Phage_HK97_TLTM	PF06120.6	gi|15921629|ref|NP_377298.1|	-	0.037	13.3	1.9	0.04	13.2	1.3	1.3	1	0	0	1	1	1	0	Tail	length	tape	measure	protein
DUF3450	PF11932.3	gi|15921629|ref|NP_377298.1|	-	0.054	12.7	9.5	0.1	11.8	6.6	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3450)
Atg14	PF10186.4	gi|15921629|ref|NP_377298.1|	-	0.065	12.1	11.8	0.092	11.6	8.2	1.2	1	0	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
ERM	PF00769.14	gi|15921629|ref|NP_377298.1|	-	0.075	12.5	13.1	0.088	12.3	9.1	1.0	1	0	0	1	1	1	0	Ezrin/radixin/moesin	family
Urease_gamma	PF00547.13	gi|15921629|ref|NP_377298.1|	-	0.09	12.8	0.9	0.33	11.0	0.3	1.8	1	1	1	2	2	2	0	Urease,	gamma	subunit
Mnd1	PF03962.10	gi|15921629|ref|NP_377298.1|	-	0.1	12.2	10.7	0.15	11.7	7.4	1.2	1	0	0	1	1	1	0	Mnd1	family
V_ATPase_I	PF01496.14	gi|15921629|ref|NP_377298.1|	-	0.11	10.3	9.4	0.13	10.0	6.5	1.0	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
NPV_P10	PF05531.7	gi|15921629|ref|NP_377298.1|	-	0.11	12.7	5.9	0.42	10.8	3.6	2.2	1	1	1	2	2	1	0	Nucleopolyhedrovirus	P10	protein
BLOC1_2	PF10046.4	gi|15921629|ref|NP_377298.1|	-	0.12	12.5	10.8	0.59	10.3	5.8	2.4	1	1	1	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
SPOUT_MTase	PF02590.12	gi|15921629|ref|NP_377298.1|	-	0.12	12.0	5.1	0.14	11.9	3.6	1.0	1	0	0	1	1	1	0	Predicted	SPOUT	methyltransferase
TSC22	PF01166.13	gi|15921629|ref|NP_377298.1|	-	0.12	12.3	1.0	0.12	12.3	0.7	3.3	1	1	3	4	4	3	0	TSC-22/dip/bun	family
BRE1	PF08647.6	gi|15921629|ref|NP_377298.1|	-	0.13	12.2	12.5	0.19	11.6	8.7	1.2	1	0	0	1	1	1	0	BRE1	E3	ubiquitin	ligase
DUF812	PF05667.6	gi|15921629|ref|NP_377298.1|	-	0.14	10.6	10.3	0.16	10.4	7.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF812)
DivIVA	PF05103.8	gi|15921629|ref|NP_377298.1|	-	0.15	12.0	15.3	1.8	8.6	10.6	2.5	1	1	0	1	1	1	0	DivIVA	protein
Rab5-bind	PF09311.6	gi|15921629|ref|NP_377298.1|	-	0.16	11.8	11.9	0.25	11.2	8.2	1.4	1	1	0	1	1	1	0	Rabaptin-like	protein
Spc24	PF08286.6	gi|15921629|ref|NP_377298.1|	-	0.17	11.6	14.3	0.6	9.8	5.5	2.1	1	1	1	2	2	2	0	Spc24	subunit	of	Ndc80
FtsA	PF14450.1	gi|15921629|ref|NP_377298.1|	-	0.18	11.6	0.4	0.21	11.4	0.3	1.1	1	0	0	1	1	1	0	Cell	division	protein	FtsA
Scaffolding_pro	PF11418.3	gi|15921629|ref|NP_377298.1|	-	0.18	12.1	7.8	0.2	11.9	4.1	1.7	1	1	1	2	2	2	0	Phi29	scaffolding	protein
TMPIT	PF07851.8	gi|15921629|ref|NP_377298.1|	-	0.18	10.8	8.0	0.22	10.5	5.5	1.2	1	0	0	1	1	1	0	TMPIT-like	protein
Synaptobrevin	PF00957.16	gi|15921629|ref|NP_377298.1|	-	0.19	11.3	8.7	0.1	12.2	3.8	1.9	1	1	1	2	2	2	0	Synaptobrevin
HemX	PF04375.9	gi|15921629|ref|NP_377298.1|	-	0.2	10.1	5.8	0.24	9.9	4.0	1.2	1	0	0	1	1	1	0	HemX
GOLGA2L5	PF15070.1	gi|15921629|ref|NP_377298.1|	-	0.21	10.0	11.3	0.24	9.8	7.9	1.1	1	0	0	1	1	1	0	Putative	golgin	subfamily	A	member	2-like	protein	5
Sec20	PF03908.8	gi|15921629|ref|NP_377298.1|	-	0.21	11.2	4.0	0.35	10.5	1.3	2.2	1	1	2	3	3	3	0	Sec20
TBPIP	PF07106.8	gi|15921629|ref|NP_377298.1|	-	0.21	11.0	14.1	0.33	10.4	9.8	1.4	1	1	0	1	1	1	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
TMF_TATA_bd	PF12325.3	gi|15921629|ref|NP_377298.1|	-	0.21	11.2	13.1	0.33	10.6	9.0	1.4	1	1	0	1	1	1	0	TATA	element	modulatory	factor	1	TATA	binding
Seadorna_VP6	PF07407.6	gi|15921629|ref|NP_377298.1|	-	0.22	10.2	2.6	0.25	10.0	1.8	1.1	1	0	0	1	1	1	0	Seadornavirus	VP6	protein
DUF342	PF03961.8	gi|15921629|ref|NP_377298.1|	-	0.22	9.9	8.1	0.29	9.5	5.6	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
bZIP_1	PF00170.16	gi|15921629|ref|NP_377298.1|	-	0.22	11.4	16.6	0.056	13.3	6.6	2.4	1	1	0	2	2	2	0	bZIP	transcription	factor
AKNA	PF12443.3	gi|15921629|ref|NP_377298.1|	-	0.3	11.1	10.4	4.8	7.2	3.4	2.4	1	1	0	2	2	2	0	AT-hook-containing	transcription	factor
Zein-binding	PF04576.10	gi|15921629|ref|NP_377298.1|	-	0.34	11.0	8.6	0.13	12.4	3.7	1.9	1	1	1	2	2	2	0	Zein-binding
HALZ	PF02183.13	gi|15921629|ref|NP_377298.1|	-	0.35	10.6	15.4	0.2	11.3	6.3	2.9	2	1	1	3	3	3	0	Homeobox	associated	leucine	zipper
eIF3_N	PF09440.5	gi|15921629|ref|NP_377298.1|	-	0.38	10.9	6.3	0.49	10.5	4.4	1.2	1	0	0	1	1	1	0	eIF3	subunit	6	N	terminal	domain
DUF1875	PF08961.5	gi|15921629|ref|NP_377298.1|	-	0.44	9.8	6.4	0.27	10.4	3.5	1.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1875)
DUF3552	PF12072.3	gi|15921629|ref|NP_377298.1|	-	0.45	9.7	12.5	0.59	9.3	8.6	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3552)
ADIP	PF11559.3	gi|15921629|ref|NP_377298.1|	-	0.46	10.3	16.3	2.6	7.9	11.3	1.9	1	1	0	1	1	1	0	Afadin-	and	alpha	-actinin-Binding
SecA_DEAD	PF07517.9	gi|15921629|ref|NP_377298.1|	-	0.48	9.6	4.3	0.53	9.5	3.0	1.2	1	0	0	1	1	1	0	SecA	DEAD-like	domain
XRCC4	PF06632.7	gi|15921629|ref|NP_377298.1|	-	0.5	9.1	10.5	0.54	9.0	7.2	1.1	1	0	0	1	1	1	0	DNA	double-strand	break	repair	and	V(D)J	recombination	protein	XRCC4
K-box	PF01486.12	gi|15921629|ref|NP_377298.1|	-	0.55	10.0	15.2	5.2	6.9	0.2	2.3	1	1	0	2	2	2	0	K-box	region
TMF_DNA_bd	PF12329.3	gi|15921629|ref|NP_377298.1|	-	0.55	10.0	20.3	0.87	9.4	12.4	2.4	1	1	1	2	2	2	0	TATA	element	modulatory	factor	1	DNA	binding
Dor1	PF04124.7	gi|15921629|ref|NP_377298.1|	-	0.56	8.6	8.8	0.63	8.4	4.9	1.6	1	1	0	1	1	1	0	Dor1-like	family
DUF1359	PF07097.6	gi|15921629|ref|NP_377298.1|	-	0.65	10.0	6.9	5.1	7.1	1.4	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1359)
Spc7	PF08317.6	gi|15921629|ref|NP_377298.1|	-	0.76	8.3	12.9	0.83	8.2	8.9	1.1	1	0	0	1	1	1	0	Spc7	kinetochore	protein
FlaC_arch	PF05377.6	gi|15921629|ref|NP_377298.1|	-	0.77	9.6	10.4	3.1	7.7	0.4	2.7	1	1	1	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
SpoIIID	PF12116.3	gi|15921629|ref|NP_377298.1|	-	0.93	9.4	4.4	0.73	9.8	1.2	2.0	1	1	1	2	2	2	0	Stage	III	sporulation	protein	D
Mod_r	PF07200.8	gi|15921629|ref|NP_377298.1|	-	0.98	9.3	12.6	1.8	8.4	8.7	1.5	1	1	0	1	1	1	0	Modifier	of	rudimentary	(Mod(r))	protein
DUF2935	PF11155.3	gi|15921629|ref|NP_377298.1|	-	1.1	9.3	6.9	5.8	7.0	4.5	1.9	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF2935)
NYD-SP28_assoc	PF14775.1	gi|15921629|ref|NP_377298.1|	-	1.2	8.8	16.3	0.077	12.7	2.6	2.5	2	1	1	3	3	2	0	Sperm	tail	C-terminal	domain
Prominin	PF05478.6	gi|15921629|ref|NP_377298.1|	-	1.2	6.5	5.1	1.4	6.3	3.5	1.2	1	0	0	1	1	1	0	Prominin
DUF3186	PF11382.3	gi|15921629|ref|NP_377298.1|	-	1.3	8.0	6.1	0.68	9.0	2.3	1.7	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3186)
bZIP_Maf	PF03131.12	gi|15921629|ref|NP_377298.1|	-	1.4	9.2	10.1	0.23	11.7	2.6	2.1	1	1	0	2	2	2	0	bZIP	Maf	transcription	factor
Med9	PF07544.8	gi|15921629|ref|NP_377298.1|	-	1.5	8.5	13.1	6.6	6.5	5.2	2.2	1	1	1	2	2	2	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
Nsp1_C	PF05064.8	gi|15921629|ref|NP_377298.1|	-	1.6	8.3	9.1	2.7	7.6	6.3	1.5	1	1	0	1	1	1	0	Nsp1-like	C-terminal	region
Chibby	PF14645.1	gi|15921629|ref|NP_377298.1|	-	1.7	8.5	10.0	0.43	10.4	4.4	1.8	1	1	1	2	2	2	0	Chibby	family
DUF4435	PF14491.1	gi|15921629|ref|NP_377298.1|	-	1.7	8.3	7.4	1.9	8.2	5.1	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4435)
Peptidase_S46	PF10459.4	gi|15921629|ref|NP_377298.1|	-	2	6.6	5.7	2.3	6.5	3.9	1.0	1	0	0	1	1	1	0	Peptidase	S46
DUF4298	PF14131.1	gi|15921629|ref|NP_377298.1|	-	2	8.3	8.2	26	4.7	4.7	2.6	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4298)
Fib_alpha	PF08702.5	gi|15921629|ref|NP_377298.1|	-	2.2	8.3	11.6	5	7.2	8.1	1.6	1	1	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
Laminin_II	PF06009.7	gi|15921629|ref|NP_377298.1|	-	2.6	7.8	9.7	4.3	7.0	6.7	1.4	1	1	0	1	1	1	0	Laminin	Domain	II
Occludin_ELL	PF07303.8	gi|15921629|ref|NP_377298.1|	-	2.6	8.8	10.8	1.4e+02	3.2	0.1	1.9	1	1	0	1	1	1	0	Occludin	homology	domain
YlqD	PF11068.3	gi|15921629|ref|NP_377298.1|	-	2.8	7.9	13.2	2	8.4	6.7	1.9	1	1	1	2	2	2	0	YlqD	protein
Syntaxin	PF00804.20	gi|15921629|ref|NP_377298.1|	-	2.9	8.0	11.6	8.5	6.5	8.0	1.9	1	1	0	1	1	1	0	Syntaxin
DUF1664	PF07889.7	gi|15921629|ref|NP_377298.1|	-	3	7.6	6.6	2.1	8.1	2.2	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
COG2	PF06148.6	gi|15921629|ref|NP_377298.1|	-	3	7.7	7.2	1.8	8.4	3.6	1.6	1	1	1	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
Prefoldin_2	PF01920.15	gi|15921629|ref|NP_377298.1|	-	3.2	7.5	17.5	4.9	6.9	1.2	2.6	1	1	1	2	2	2	0	Prefoldin	subunit
Cauli_AT	PF03233.8	gi|15921629|ref|NP_377298.1|	-	3.3	7.4	10.0	1.7	8.3	3.8	1.9	1	1	1	2	2	2	0	Aphid	transmission	protein
Speriolin_N	PF15058.1	gi|15921629|ref|NP_377298.1|	-	3.4	7.5	11.5	11	5.8	8.0	1.9	1	1	0	1	1	1	0	Speriolin	N	terminus
FHIPEP	PF00771.15	gi|15921629|ref|NP_377298.1|	-	3.6	5.8	6.2	4.1	5.6	4.3	1.0	1	0	0	1	1	1	0	FHIPEP	family
DUF3373	PF11853.3	gi|15921629|ref|NP_377298.1|	-	3.9	5.8	7.3	4.9	5.5	5.0	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3373)
CENP-Q	PF13094.1	gi|15921629|ref|NP_377298.1|	-	4.1	7.4	15.5	9.5	6.2	10.8	1.6	1	1	0	1	1	1	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
UPF0184	PF03670.8	gi|15921629|ref|NP_377298.1|	-	5	7.3	7.7	2.5	8.3	3.2	2.0	1	1	1	2	2	2	0	Uncharacterised	protein	family	(UPF0184)
Latarcin	PF10279.4	gi|15921629|ref|NP_377298.1|	-	5.3	7.3	12.0	37	4.5	8.3	2.0	1	1	0	1	1	1	0	Latarcin	precursor
Rho_Binding	PF08912.6	gi|15921629|ref|NP_377298.1|	-	6.1	7.2	17.7	3.6	7.9	5.9	2.8	1	1	2	3	3	3	0	Rho	Binding
CorA	PF01544.13	gi|15921629|ref|NP_377298.1|	-	6.2	5.7	8.8	7.4	5.5	6.1	1.1	1	0	0	1	1	1	0	CorA-like	Mg2+	transporter	protein
FemAB	PF02388.11	gi|15921629|ref|NP_377298.1|	-	6.5	5.3	10.0	3	6.4	5.7	1.3	1	1	0	1	1	1	0	FemAB	family
Viral_P18	PF04521.8	gi|15921629|ref|NP_377298.1|	-	6.9	6.1	9.8	1.8	8.0	3.8	2.0	1	1	1	2	2	2	0	ssRNA	positive	strand	viral	18kD	cysteine	rich	protein
DUF3847	PF12958.2	gi|15921629|ref|NP_377298.1|	-	7.7	6.3	15.7	3.6	7.3	5.8	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3847)
DUF4187	PF13821.1	gi|15921629|ref|NP_377298.1|	-	7.8	6.1	6.0	32	4.2	0.1	2.6	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4187)
DUF2203	PF09969.4	gi|15921629|ref|NP_377298.1|	-	8	6.7	6.9	18	5.5	4.8	1.7	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2203)
CALCOCO1	PF07888.6	gi|15921629|ref|NP_377298.1|	-	8.2	4.5	11.4	1.9	6.6	5.2	1.5	1	1	0	1	1	1	0	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
DUF4337	PF14235.1	gi|15921629|ref|NP_377298.1|	-	8.3	6.2	7.6	2.1	8.1	3.0	1.6	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4337)
DUF2205	PF10224.4	gi|15921629|ref|NP_377298.1|	-	8.3	6.0	12.9	4.4	6.9	7.1	2.0	1	1	1	2	2	2	0	Predicted	coiled-coil	protein	(DUF2205)
DUF4446	PF14584.1	gi|15921629|ref|NP_377298.1|	-	8.6	6.1	7.8	2.9	7.7	3.0	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4446)
FlxA	PF14282.1	gi|15921629|ref|NP_377298.1|	-	8.8	6.3	12.1	19	5.2	6.2	2.4	1	1	0	2	2	2	0	FlxA-like	protein
WD40_alt	PF14077.1	gi|15921629|ref|NP_377298.1|	-	9.8	5.8	8.0	1.7	8.3	2.6	1.9	2	0	0	2	2	1	0	Alternative	WD40	repeat	motif
Phage_integrase	PF00589.17	gi|15921631|ref|NP_377300.1|	-	7.6e-12	45.2	0.0	2.2e-11	43.7	0.0	1.8	1	0	0	1	1	1	1	Phage	integrase	family
Frankia_peptide	PF14407.1	gi|15921631|ref|NP_377300.1|	-	0.0043	16.7	0.1	0.058	13.1	0.0	2.5	3	0	0	3	3	3	1	Ribosomally	synthesized	peptide	prototyped	by	Frankia	Franean1_4349.
Phage_int_SAM_4	PF13495.1	gi|15921631|ref|NP_377300.1|	-	0.0056	16.9	1.2	0.096	13.0	0.1	3.2	4	0	0	4	4	4	1	Phage	integrase,	N-terminal	SAM-like	domain
PapC_N	PF13954.1	gi|15921632|ref|NP_377301.1|	-	0.0063	16.0	0.4	0.014	14.9	0.2	1.6	1	0	0	1	1	1	1	PapC	N-terminal	domain
AdoMet_dc	PF02675.10	gi|15921633|ref|NP_377302.1|	-	9e-35	118.7	0.0	1e-34	118.5	0.0	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	decarboxylase
YbaB_DNA_bd	PF02575.11	gi|15921633|ref|NP_377302.1|	-	0.061	13.2	0.0	0.085	12.7	0.0	1.3	1	0	0	1	1	1	0	YbaB/EbfC	DNA-binding	family
DUF4116	PF13475.1	gi|15921633|ref|NP_377302.1|	-	0.077	12.4	0.1	0.17	11.4	0.1	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4116)
ACP_syn_III_C	PF08541.5	gi|15921634|ref|NP_377303.1|	-	1.1e-10	41.4	0.0	4.4e-10	39.4	0.0	2.0	2	1	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III	C	terminal
HMG_CoA_synt_C	PF08540.5	gi|15921634|ref|NP_377303.1|	-	3.8e-05	23.3	0.0	0.008	15.6	0.0	2.1	1	1	1	2	2	2	2	Hydroxymethylglutaryl-coenzyme	A	synthase	C	terminal
ACP_syn_III	PF08545.5	gi|15921634|ref|NP_377303.1|	-	5.1e-05	22.8	0.2	0.00014	21.4	0.1	1.8	1	0	0	1	1	1	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Chal_sti_synt_N	PF00195.14	gi|15921634|ref|NP_377303.1|	-	0.022	14.0	0.0	0.44	9.7	0.0	2.2	2	0	0	2	2	2	0	Chalcone	and	stilbene	synthases,	N-terminal	domain
FAE1_CUT1_RppA	PF08392.7	gi|15921634|ref|NP_377303.1|	-	0.047	12.7	0.0	0.07	12.1	0.0	1.2	1	0	0	1	1	1	0	FAE1/Type	III	polyketide	synthase-like	protein
HMG_CoA_synt_N	PF01154.12	gi|15921634|ref|NP_377303.1|	-	0.11	12.0	0.0	0.17	11.4	0.0	1.2	1	0	0	1	1	1	0	Hydroxymethylglutaryl-coenzyme	A	synthase	N	terminal
Thiolase_C	PF02803.13	gi|15921634|ref|NP_377303.1|	-	0.13	11.6	0.0	0.25	10.7	0.0	1.5	1	0	0	1	1	1	0	Thiolase,	C-terminal	domain
ACP_syn_III	PF08545.5	gi|15921635|ref|NP_377304.1|	-	0.0012	18.4	0.4	0.0061	16.1	0.0	2.1	2	0	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Thiolase_C	PF02803.13	gi|15921635|ref|NP_377304.1|	-	0.0044	16.4	0.0	0.0086	15.4	0.0	1.4	1	0	0	1	1	1	1	Thiolase,	C-terminal	domain
HTH_6	PF01418.12	gi|15921635|ref|NP_377304.1|	-	0.1	12.3	0.0	0.26	11.0	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain,	rpiR	family
DUF35	PF01796.12	gi|15921636|ref|NP_377305.1|	-	3.7e-12	46.2	0.0	5.2e-12	45.8	0.0	1.2	1	0	0	1	1	1	1	DUF35	OB-fold	domain
DUF35_N	PF12172.3	gi|15921636|ref|NP_377305.1|	-	0.001	18.9	0.0	0.0019	18.0	0.0	1.5	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zinc_ribbon_2	PF13240.1	gi|15921636|ref|NP_377305.1|	-	0.021	14.2	3.7	0.038	13.4	2.6	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
RecR	PF02132.10	gi|15921636|ref|NP_377305.1|	-	0.026	13.9	0.8	0.058	12.8	0.6	1.6	1	0	0	1	1	1	0	RecR	protein
DZR	PF12773.2	gi|15921636|ref|NP_377305.1|	-	0.026	14.3	1.1	0.044	13.6	0.7	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
Desulfoferrod_N	PF06397.7	gi|15921636|ref|NP_377305.1|	-	0.056	12.8	3.7	1.9	7.9	0.4	2.3	2	0	0	2	2	2	0	Desulfoferrodoxin,	N-terminal	domain
DUF2310	PF10071.4	gi|15921636|ref|NP_377305.1|	-	0.072	12.0	0.0	0.11	11.4	0.0	1.3	1	0	0	1	1	1	0	Zn-ribbon-containing,	possibly	nucleic-acid-binding	protein	(DUF2310)
RE_MamI	PF09567.5	gi|15921636|ref|NP_377305.1|	-	0.074	12.0	0.0	0.096	11.7	0.0	1.2	1	0	0	1	1	1	0	MamI	restriction	endonuclease
RNA_POL_M_15KD	PF02150.11	gi|15921636|ref|NP_377305.1|	-	0.097	12.3	1.7	0.36	10.5	1.2	1.9	1	1	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
Methyltransf_13	PF08421.6	gi|15921636|ref|NP_377305.1|	-	0.12	11.8	0.0	9.8	5.7	0.0	2.2	2	0	0	2	2	2	0	Putative	zinc	binding	domain
Zn-ribbon_8	PF09723.5	gi|15921636|ref|NP_377305.1|	-	0.19	11.6	3.5	1.9	8.5	2.5	2.2	1	1	0	1	1	1	0	Zinc	ribbon	domain
zf-ribbon_3	PF13248.1	gi|15921636|ref|NP_377305.1|	-	0.2	10.9	1.7	0.43	9.8	1.2	1.5	1	1	0	1	1	1	0	zinc-ribbon	domain
Nudix_N_2	PF14803.1	gi|15921636|ref|NP_377305.1|	-	0.23	11.1	2.0	11	5.8	0.1	2.5	2	0	0	2	2	2	0	Nudix	N-terminal
NOB1_Zn_bind	PF08772.6	gi|15921636|ref|NP_377305.1|	-	1.3	8.8	4.1	7.3	6.4	2.0	2.5	1	1	1	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
HMG-CoA_red	PF00368.13	gi|15921637|ref|NP_377306.1|	-	8.6e-146	485.3	0.6	1e-145	485.1	0.4	1.0	1	0	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	reductase
FIST_C	PF10442.4	gi|15921637|ref|NP_377306.1|	-	0.053	13.4	0.0	0.084	12.8	0.0	1.3	1	0	0	1	1	1	0	FIST	C	domain
SHMT	PF00464.14	gi|15921638|ref|NP_377307.1|	-	1.4e-67	227.8	0.2	1.8e-67	227.4	0.1	1.0	1	0	0	1	1	1	1	Serine	hydroxymethyltransferase
Beta_elim_lyase	PF01212.16	gi|15921638|ref|NP_377307.1|	-	1.4e-09	37.5	0.1	1.9e-09	37.0	0.1	1.2	1	0	0	1	1	1	1	Beta-eliminating	lyase
Aminotran_1_2	PF00155.16	gi|15921638|ref|NP_377307.1|	-	2.5e-09	36.5	0.1	6.2e-09	35.2	0.1	1.5	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.14	gi|15921638|ref|NP_377307.1|	-	0.00012	21.0	0.0	0.00018	20.4	0.0	1.3	1	0	0	1	1	1	1	Aminotransferase	class-V
DegT_DnrJ_EryC1	PF01041.12	gi|15921638|ref|NP_377307.1|	-	0.016	14.2	0.5	0.03	13.3	0.3	1.6	1	1	0	1	1	1	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
SelA	PF03841.8	gi|15921638|ref|NP_377307.1|	-	0.061	12.0	0.0	0.11	11.1	0.0	1.4	1	0	0	1	1	1	0	L-seryl-tRNA	selenium	transferase
Usp	PF00582.21	gi|15921639|ref|NP_377308.1|	-	1.6e-20	73.6	0.0	2.2e-20	73.2	0.0	1.2	1	0	0	1	1	1	1	Universal	stress	protein	family
Gp_dh_C	PF02800.15	gi|15921640|ref|NP_377309.1|	-	6.2e-19	67.9	3.5	6.2e-19	67.9	2.5	1.5	2	0	0	2	2	2	1	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
Gp_dh_N	PF00044.19	gi|15921640|ref|NP_377309.1|	-	1.5e-18	67.1	1.7	5.7e-18	65.3	0.3	2.3	2	0	0	2	2	2	1	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
DapB_N	PF01113.15	gi|15921640|ref|NP_377309.1|	-	1.4e-11	44.3	0.3	3.6e-11	43.0	0.2	1.7	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
2-Hacid_dh_C	PF02826.14	gi|15921640|ref|NP_377309.1|	-	0.00061	18.9	0.8	0.071	12.2	0.2	3.1	2	1	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
GFO_IDH_MocA	PF01408.17	gi|15921640|ref|NP_377309.1|	-	0.0013	19.2	0.0	0.0037	17.7	0.0	1.8	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
Semialdhyde_dh	PF01118.19	gi|15921640|ref|NP_377309.1|	-	0.0017	18.6	0.1	0.0061	16.8	0.0	2.0	2	0	0	2	2	2	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
NAD_binding_3	PF03447.11	gi|15921640|ref|NP_377309.1|	-	0.0038	17.6	0.2	0.017	15.5	0.0	2.1	2	0	0	2	2	2	1	Homoserine	dehydrogenase,	NAD	binding	domain
IlvN	PF07991.7	gi|15921640|ref|NP_377309.1|	-	0.011	15.0	1.0	0.53	9.6	0.3	2.9	2	1	0	2	2	2	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
NAD_binding_2	PF03446.10	gi|15921640|ref|NP_377309.1|	-	0.07	12.9	1.9	0.22	11.3	0.1	2.4	2	1	0	2	2	2	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
PGK	PF00162.14	gi|15921641|ref|NP_377310.1|	-	1.5e-112	375.9	0.0	1.7e-112	375.7	0.0	1.0	1	0	0	1	1	1	1	Phosphoglycerate	kinase
YfzA	PF14118.1	gi|15921644|ref|NP_377313.1|	-	4.3	7.5	5.9	6.4	6.9	4.1	1.4	1	1	0	1	1	1	0	YfzA-like	protein
Methylase_S	PF01420.14	gi|15921645|ref|NP_377314.1|	-	0.099	12.6	1.6	0.26	11.2	1.1	1.6	1	1	0	1	1	1	0	Type	I	restriction	modification	DNA	specificity	domain
DUF3590	PF12148.3	gi|15921646|ref|NP_377315.1|	-	0.043	13.4	0.9	0.064	12.8	0.6	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3590)
MMR_HSR1_C	PF08438.5	gi|15921646|ref|NP_377315.1|	-	0.049	13.8	1.3	0.07	13.3	0.9	1.3	1	0	0	1	1	1	0	GTPase	of	unknown	function	C-terminal
AcylCoA_DH_N	PF12418.3	gi|15921646|ref|NP_377315.1|	-	0.062	12.9	0.0	0.11	12.2	0.0	1.3	1	0	0	1	1	1	0	Acyl-CoA	dehydrogenase	N	terminal
ZapA	PF05164.8	gi|15921646|ref|NP_377315.1|	-	0.21	11.5	3.4	0.2	11.6	0.6	2.0	1	1	1	2	2	2	0	Cell	division	protein	ZapA
SIS_2	PF13580.1	gi|15921646|ref|NP_377315.1|	-	0.45	10.2	4.2	2.4	7.8	0.2	2.3	2	0	0	2	2	2	0	SIS	domain
Vps51	PF08700.6	gi|15921646|ref|NP_377315.1|	-	3.6	7.5	7.2	1.4	8.8	0.9	2.7	2	2	0	2	2	2	0	Vps51/Vps67
DUF434	PF04256.7	gi|15921647|ref|NP_377316.1|	-	4.3e-26	90.0	2.1	7.7e-26	89.2	1.5	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF434)
Mut7-C	PF01927.11	gi|15921647|ref|NP_377316.1|	-	0.0024	17.8	0.1	0.41	10.6	0.0	2.2	2	0	0	2	2	2	2	Mut7-C	RNAse	domain
Arg_repressor	PF01316.16	gi|15921647|ref|NP_377316.1|	-	0.098	12.2	0.1	0.21	11.1	0.1	1.6	1	0	0	1	1	1	0	Arginine	repressor,	DNA	binding	domain
tRNA-synt_2c	PF01411.14	gi|15921648|ref|NP_377317.1|	-	1.2e-116	390.1	0.0	2.2e-116	389.3	0.0	1.4	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(A)
tRNA_SAD	PF07973.9	gi|15921648|ref|NP_377317.1|	-	3.6e-14	52.3	0.3	8.3e-14	51.1	0.2	1.7	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
tRNA-synt_2e	PF02091.10	gi|15921648|ref|NP_377317.1|	-	0.015	14.4	0.0	0.055	12.5	0.0	2.0	1	0	0	1	1	1	0	Glycyl-tRNA	synthetase	alpha	subunit
Ribosomal_60s	PF00428.14	gi|15921649|ref|NP_377318.1|	-	3.6e-20	72.1	13.3	4.2e-20	71.9	9.2	1.1	1	0	0	1	1	1	1	60s	Acidic	ribosomal	protein
PepSY_2	PF13670.1	gi|15921649|ref|NP_377318.1|	-	0.0007	19.4	1.3	0.93	9.4	0.2	2.2	2	0	0	2	2	2	2	Peptidase	propeptide	and	YPEB	domain
DUF4424	PF14415.1	gi|15921649|ref|NP_377318.1|	-	0.054	13.0	0.4	0.064	12.7	0.3	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4424)
DUF3323	PF11796.3	gi|15921649|ref|NP_377318.1|	-	0.087	12.1	2.5	0.15	11.4	1.7	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	N-terminus	(DUF3323)
Ribosomal_L10	PF00466.15	gi|15921650|ref|NP_377319.1|	-	2.2e-27	94.8	0.2	4.9e-27	93.7	0.1	1.6	1	0	0	1	1	1	1	Ribosomal	protein	L10
Ribosomal_60s	PF00428.14	gi|15921650|ref|NP_377319.1|	-	7.1e-05	23.1	3.7	0.00017	21.9	2.6	1.7	1	0	0	1	1	1	1	60s	Acidic	ribosomal	protein
7TMR-HDED	PF07697.6	gi|15921650|ref|NP_377319.1|	-	0.014	15.1	0.3	0.041	13.6	0.0	1.8	2	0	0	2	2	2	0	7TM-HD	extracellular
Ribosomal_L1	PF00687.16	gi|15921651|ref|NP_377320.1|	-	2.1e-43	148.2	2.0	2.5e-43	147.9	1.4	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L1p/L10e	family
Ribosomal_L11_N	PF03946.9	gi|15921652|ref|NP_377321.1|	-	2.8e-21	74.7	0.7	5.5e-21	73.7	0.5	1.5	1	0	0	1	1	1	1	Ribosomal	protein	L11,	N-terminal	domain
Ribosomal_L11	PF00298.14	gi|15921652|ref|NP_377321.1|	-	3.5e-20	71.9	0.9	6.1e-20	71.1	0.6	1.4	1	0	0	1	1	1	1	Ribosomal	protein	L11,	RNA	binding	domain
HsbA	PF12296.3	gi|15921652|ref|NP_377321.1|	-	0.11	12.3	1.3	0.84	9.4	0.1	2.2	2	1	0	2	2	2	0	Hydrophobic	surface	binding	protein	A
Spt5-NGN	PF03439.8	gi|15921653|ref|NP_377322.1|	-	1.5e-23	82.3	0.2	2.6e-23	81.5	0.2	1.4	1	0	0	1	1	1	1	Early	transcription	elongation	factor	of	RNA	pol	II,	NGN	section
KOW	PF00467.24	gi|15921653|ref|NP_377322.1|	-	8.7e-08	31.5	1.0	2.2e-07	30.3	0.1	2.1	2	0	0	2	2	2	1	KOW	motif
NusG	PF02357.14	gi|15921653|ref|NP_377322.1|	-	4.7e-05	23.5	0.2	0.0001	22.4	0.0	1.7	2	0	0	2	2	2	1	Transcription	termination	factor	nusG
PalH	PF08733.5	gi|15921654|ref|NP_377323.1|	-	0.0026	16.6	0.0	0.0028	16.5	0.0	1.0	1	0	0	1	1	1	1	PalH/RIM21
Synaptobrevin	PF00957.16	gi|15921654|ref|NP_377323.1|	-	0.023	14.2	0.3	0.026	14.1	0.2	1.2	1	0	0	1	1	1	0	Synaptobrevin
SRP54	PF00448.17	gi|60623873|ref|NP_377324.2|	-	9.4e-73	243.8	0.0	1.5e-72	243.1	0.0	1.4	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SRP54_N	PF02881.14	gi|60623873|ref|NP_377324.2|	-	4.4e-12	45.9	4.0	4.4e-12	45.9	2.7	3.0	2	1	1	3	3	3	1	SRP54-type	protein,	helical	bundle	domain
AAA_22	PF13401.1	gi|60623873|ref|NP_377324.2|	-	4.5e-06	26.8	0.2	3.2e-05	24.0	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
cobW	PF02492.14	gi|60623873|ref|NP_377324.2|	-	7.7e-06	25.4	0.2	7.7e-06	25.4	0.1	1.7	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_33	PF13671.1	gi|60623873|ref|NP_377324.2|	-	0.00077	19.3	0.0	0.011	15.5	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
AAA	PF00004.24	gi|60623873|ref|NP_377324.2|	-	0.0017	18.5	2.0	0.0068	16.6	0.1	2.7	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
NTPase_1	PF03266.10	gi|60623873|ref|NP_377324.2|	-	0.0017	18.0	6.7	0.23	11.1	0.3	3.5	2	1	1	3	3	3	1	NTPase
MobB	PF03205.9	gi|60623873|ref|NP_377324.2|	-	0.0059	16.3	0.7	0.0059	16.3	0.5	2.6	2	1	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_30	PF13604.1	gi|60623873|ref|NP_377324.2|	-	0.0097	15.4	0.0	0.018	14.6	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|60623873|ref|NP_377324.2|	-	0.0099	15.7	0.1	0.0099	15.7	0.1	2.4	1	1	1	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|60623873|ref|NP_377324.2|	-	0.011	15.7	0.1	0.044	13.7	0.0	2.1	1	1	1	2	2	2	0	AAA	ATPase	domain
NB-ARC	PF00931.17	gi|60623873|ref|NP_377324.2|	-	0.014	14.3	3.1	0.083	11.7	0.1	2.3	1	1	1	2	2	2	0	NB-ARC	domain
ArgK	PF03308.11	gi|60623873|ref|NP_377324.2|	-	0.022	13.5	0.0	0.2	10.4	0.0	2.2	2	0	0	2	2	2	0	ArgK	protein
DUF258	PF03193.11	gi|60623873|ref|NP_377324.2|	-	0.036	13.2	0.2	0.1	11.7	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF258
AAA_28	PF13521.1	gi|60623873|ref|NP_377324.2|	-	0.039	13.9	0.0	0.12	12.3	0.0	1.9	1	0	0	1	1	1	0	AAA	domain
Toprim_Crpt	PF13342.1	gi|60623873|ref|NP_377324.2|	-	0.044	13.4	2.6	17	5.0	0.1	3.8	3	1	0	3	3	3	0	C-terminal	repeat	of	topoisomerase
Peripla_BP_4	PF13407.1	gi|60623873|ref|NP_377324.2|	-	0.053	12.8	2.7	3.2	7.0	0.1	3.1	2	1	0	3	3	3	0	Periplasmic	binding	protein	domain
NACHT	PF05729.7	gi|60623873|ref|NP_377324.2|	-	0.077	12.6	0.0	0.2	11.2	0.0	1.7	1	0	0	1	1	1	0	NACHT	domain
APS_kinase	PF01583.15	gi|60623873|ref|NP_377324.2|	-	0.078	12.6	0.0	0.15	11.7	0.0	1.4	1	0	0	1	1	1	0	Adenylylsulphate	kinase
AAA_19	PF13245.1	gi|60623873|ref|NP_377324.2|	-	0.078	12.7	0.0	0.17	11.6	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
DUF2855	PF11017.3	gi|60623873|ref|NP_377324.2|	-	0.088	11.9	0.2	0.48	9.5	0.1	2.1	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF2855)
Miro	PF08477.8	gi|60623873|ref|NP_377324.2|	-	0.2	12.1	0.2	0.2	12.1	0.1	2.9	2	2	0	2	2	2	0	Miro-like	protein
AAA_31	PF13614.1	gi|60623873|ref|NP_377324.2|	-	0.29	11.0	2.1	14	5.5	0.1	3.3	3	0	0	3	3	3	0	AAA	domain
AAA_17	PF13207.1	gi|60623873|ref|NP_377324.2|	-	0.62	10.8	6.8	0.32	11.8	0.5	2.9	2	1	0	2	2	2	0	AAA	domain
ABC_tran	PF00005.22	gi|60623873|ref|NP_377324.2|	-	0.8	10.0	5.7	1.3	9.3	0.0	2.5	1	1	0	2	2	2	0	ABC	transporter
CbiA	PF01656.18	gi|60623873|ref|NP_377324.2|	-	2	7.7	13.7	0.063	12.6	2.8	3.0	1	1	1	2	2	2	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
CW_binding_2	PF04122.7	gi|60623873|ref|NP_377324.2|	-	4.7	7.5	6.2	11	6.2	0.0	3.3	3	1	2	5	5	4	0	Putative	cell	wall	binding	repeat	2
DsrD	PF08679.6	gi|60623873|ref|NP_377324.2|	-	5.8	6.9	9.5	1	9.4	1.6	2.8	2	0	0	2	2	2	0	Dissimilatory	sulfite	reductase	D	(DsrD)
Prefoldin	PF02996.12	gi|15921656|ref|NP_377325.1|	-	1.7e-26	92.2	6.8	1.7e-26	92.2	4.7	1.4	2	0	0	2	2	1	1	Prefoldin	subunit
Herpes_UL36	PF03586.8	gi|15921656|ref|NP_377325.1|	-	0.0058	15.7	1.7	0.012	14.7	0.1	1.9	1	1	1	2	2	2	1	Herpesvirus	UL36	tegument	protein
CENP-F_leu_zip	PF10473.4	gi|15921656|ref|NP_377325.1|	-	0.0073	16.1	2.8	0.0073	16.1	1.9	2.1	2	0	0	2	2	2	1	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
OmpH	PF03938.9	gi|15921656|ref|NP_377325.1|	-	0.015	15.2	10.9	0.039	13.8	7.5	1.6	1	1	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
Sec8_exocyst	PF04048.9	gi|15921656|ref|NP_377325.1|	-	0.046	13.3	5.9	0.065	12.8	0.4	2.4	2	1	0	2	2	2	0	Sec8	exocyst	complex	component	specific	domain
Glyco_hydro_4C	PF11975.3	gi|15921656|ref|NP_377325.1|	-	0.05	13.3	0.3	0.076	12.7	0.2	1.3	1	1	0	1	1	1	0	Family	4	glycosyl	hydrolase	C-terminal	domain
H-kinase_dim	PF02895.9	gi|15921656|ref|NP_377325.1|	-	0.052	13.8	1.4	1.7	9.0	0.1	2.4	2	0	0	2	2	2	0	Signal	transducing	histidine	kinase,	homodimeric	domain
ATG16	PF08614.6	gi|15921656|ref|NP_377325.1|	-	0.073	12.8	9.6	1.3	8.8	2.0	2.0	2	0	0	2	2	2	0	Autophagy	protein	16	(ATG16)
DUF1664	PF07889.7	gi|15921656|ref|NP_377325.1|	-	0.076	12.8	6.6	1	9.1	0.5	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
Mnd1	PF03962.10	gi|15921656|ref|NP_377325.1|	-	0.086	12.4	2.9	1.9	8.0	0.0	2.1	1	1	1	2	2	2	0	Mnd1	family
Vert_HS_TF	PF06546.6	gi|15921656|ref|NP_377325.1|	-	0.12	11.7	0.9	0.21	10.9	0.6	1.4	1	0	0	1	1	1	0	Vertebrate	heat	shock	transcription	factor
CENP-R	PF06729.7	gi|15921656|ref|NP_377325.1|	-	0.13	11.9	5.6	0.37	10.4	0.5	2.1	2	0	0	2	2	2	0	Kinetochore	component,	CENP-R
Prefoldin_2	PF01920.15	gi|15921656|ref|NP_377325.1|	-	0.17	11.6	14.3	1	9.1	1.3	2.8	1	1	2	3	3	3	0	Prefoldin	subunit
EMP24_GP25L	PF01105.19	gi|15921656|ref|NP_377325.1|	-	0.19	11.4	4.1	3.1	7.4	0.3	2.1	1	1	1	2	2	2	0	emp24/gp25L/p24	family/GOLD
Tektin	PF03148.9	gi|15921656|ref|NP_377325.1|	-	0.29	9.6	7.7	0.29	9.6	0.4	2.1	2	0	0	2	2	2	0	Tektin	family
NPV_P10	PF05531.7	gi|15921656|ref|NP_377325.1|	-	0.36	11.1	8.4	2.8	8.2	0.9	2.4	2	0	0	2	2	2	0	Nucleopolyhedrovirus	P10	protein
KNOX2	PF03791.8	gi|15921656|ref|NP_377325.1|	-	0.42	9.9	3.5	7.3	5.9	0.4	2.4	2	0	0	2	2	2	0	KNOX2	domain
NEP	PF10167.4	gi|15921656|ref|NP_377325.1|	-	0.48	10.1	3.1	2.3	7.9	0.2	2.4	2	1	0	2	2	2	0	Uncharacterised	conserved	protein
Cep57_MT_bd	PF06657.8	gi|15921656|ref|NP_377325.1|	-	0.57	10.1	11.8	3	7.8	1.5	2.4	2	0	0	2	2	2	0	Centrosome	microtubule-binding	domain	of	Cep57
DUF412	PF04217.8	gi|15921656|ref|NP_377325.1|	-	0.65	9.8	3.3	0.49	10.2	0.4	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF412
AATF-Che1	PF13339.1	gi|15921656|ref|NP_377325.1|	-	0.67	10.1	6.2	2.6	8.2	0.3	2.1	2	0	0	2	2	2	0	Apoptosis	antagonizing	transcription	factor
COG2	PF06148.6	gi|15921656|ref|NP_377325.1|	-	0.69	9.7	4.8	6.6	6.6	0.3	2.4	2	1	0	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
Fib_alpha	PF08702.5	gi|15921656|ref|NP_377325.1|	-	0.7	10.0	10.9	1.3	9.1	1.2	2.3	2	1	0	2	2	2	0	Fibrinogen	alpha/beta	chain	family
Reo_sigmaC	PF04582.7	gi|15921656|ref|NP_377325.1|	-	0.79	8.8	6.0	3.2	6.8	0.4	2.0	2	0	0	2	2	2	0	Reovirus	sigma	C	capsid	protein
DUF4164	PF13747.1	gi|15921656|ref|NP_377325.1|	-	0.97	9.6	5.1	0.68	10.1	0.4	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4164)
DUF2935	PF11155.3	gi|15921656|ref|NP_377325.1|	-	1.1	9.3	4.9	8.9	6.4	0.2	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF2935)
Baculo_PEP_C	PF04513.7	gi|15921656|ref|NP_377325.1|	-	1.1	9.0	8.2	4.1	7.2	0.9	2.2	2	0	0	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Fzo_mitofusin	PF04799.8	gi|15921656|ref|NP_377325.1|	-	1.6	8.1	5.9	2.2	7.6	0.4	2.2	2	0	0	2	2	2	0	fzo-like	conserved	region
DUF3450	PF11932.3	gi|15921656|ref|NP_377325.1|	-	1.7	7.8	13.5	0.071	12.3	2.2	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3450)
Syntaxin-6_N	PF09177.6	gi|15921656|ref|NP_377325.1|	-	2.4	8.6	8.1	8.5	6.8	1.0	2.7	2	1	0	2	2	2	0	Syntaxin	6,	N-terminal
Spc24	PF08286.6	gi|15921656|ref|NP_377325.1|	-	2.7	7.7	10.0	2.1	8.0	0.5	2.3	2	0	0	2	2	2	0	Spc24	subunit	of	Ndc80
Cortex-I_coil	PF09304.5	gi|15921656|ref|NP_377325.1|	-	2.9	7.9	11.9	2.3	8.3	0.8	2.5	2	1	0	2	2	2	0	Cortexillin	I,	coiled	coil
Exonuc_VII_S	PF02609.11	gi|15921656|ref|NP_377325.1|	-	3.5	7.4	9.7	1.1	9.0	1.6	2.9	2	1	1	3	3	3	0	Exonuclease	VII	small	subunit
Nsp1_C	PF05064.8	gi|15921656|ref|NP_377325.1|	-	3.6	7.2	13.2	9.7	5.8	2.7	2.8	2	1	0	2	2	2	0	Nsp1-like	C-terminal	region
DUF4168	PF13767.1	gi|15921656|ref|NP_377325.1|	-	4.8	7.8	7.8	4.2	8.0	1.2	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4168)
DUF745	PF05335.8	gi|15921656|ref|NP_377325.1|	-	5.2	6.5	11.4	4.9	6.6	0.8	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF745)
Ribosomal_L18ae	PF01775.12	gi|15921657|ref|NP_377326.1|	-	5.8e-10	39.1	2.6	8.7e-10	38.5	1.8	1.3	1	0	0	1	1	1	1	Ribosomal	L18ae/LX	protein	domain
Ribosomal_L36e	PF01158.13	gi|15921657|ref|NP_377326.1|	-	0.0012	18.7	1.3	0.0015	18.4	0.9	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L36e
BsuBI_PstI_RE	PF06616.6	gi|15921657|ref|NP_377326.1|	-	0.034	12.9	0.3	0.039	12.7	0.2	1.0	1	0	0	1	1	1	0	BsuBI/PstI	restriction	endonuclease	C-terminus
UBN_AB	PF14075.1	gi|15921657|ref|NP_377326.1|	-	0.038	13.6	1.2	0.04	13.5	0.8	1.2	1	0	0	1	1	1	0	Ubinuclein	conserved	middle	domain
TcdB_toxin_midN	PF12256.3	gi|15921657|ref|NP_377326.1|	-	0.15	11.5	0.2	0.18	11.2	0.1	1.1	1	0	0	1	1	1	0	Insecticide	toxin	TcdB	middle/N-terminal	region
eIF-6	PF01912.13	gi|15921658|ref|NP_377327.1|	-	5.1e-70	234.6	5.7	6.1e-70	234.3	4.0	1.1	1	0	0	1	1	1	1	eIF-6	family
Nicastrin	PF05450.10	gi|15921658|ref|NP_377327.1|	-	0.095	11.9	0.0	0.16	11.1	0.0	1.4	1	0	0	1	1	1	0	Nicastrin
Ribosomal_L31e	PF01198.14	gi|15921660|ref|NP_377329.1|	-	4.3e-13	48.7	2.7	5.1e-13	48.5	1.9	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L31e
V_cholerae_RfbT	PF05575.6	gi|15921660|ref|NP_377329.1|	-	0.034	13.1	0.0	0.034	13.1	0.0	1.2	1	0	0	1	1	1	0	Vibrio	cholerae	RfbT	protein
AAA_25	PF13481.1	gi|15921660|ref|NP_377329.1|	-	0.12	11.7	0.0	0.12	11.7	0.0	1.1	1	0	0	1	1	1	0	AAA	domain
Ribosomal_L39	PF00832.15	gi|15921661|ref|NP_377330.1|	-	1.4e-22	78.8	3.8	1.6e-22	78.6	2.6	1.1	1	0	0	1	1	1	1	Ribosomal	L39	protein
REV	PF00424.13	gi|15921661|ref|NP_377330.1|	-	0.087	12.7	0.6	0.092	12.6	0.4	1.1	1	0	0	1	1	1	0	REV	protein	(anti-repression	trans-activator	protein)
dsDNA_bind	PF01984.15	gi|15921662|ref|NP_377331.1|	-	5.3e-31	106.7	13.7	6.7e-31	106.4	9.5	1.0	1	0	0	1	1	1	1	Double-stranded	DNA-binding	domain
MyTH4	PF00784.12	gi|15921662|ref|NP_377331.1|	-	0.0039	17.1	1.9	0.0091	15.9	0.1	2.1	2	0	0	2	2	2	1	MyTH4	domain
YopR_core	PF09025.5	gi|15921662|ref|NP_377331.1|	-	0.02	14.9	4.0	0.03	14.3	2.7	1.3	1	1	0	1	1	1	0	YopR	Core
HsbA	PF12296.3	gi|15921662|ref|NP_377331.1|	-	0.054	13.3	0.6	1.8	8.4	0.0	2.2	1	1	1	2	2	2	0	Hydrophobic	surface	binding	protein	A
Ofd1_CTDD	PF10637.4	gi|15921662|ref|NP_377331.1|	-	0.14	11.2	1.3	0.17	10.9	0.9	1.0	1	0	0	1	1	1	0	Oxoglutarate	and	iron-dependent	oxygenase	degradation	C-term
T3SS_LEE_assoc	PF13327.1	gi|15921662|ref|NP_377331.1|	-	1.2	8.6	4.4	17	4.9	3.0	2.1	1	1	0	1	1	1	0	Type	III	secretion	system	subunit
PIN_3	PF13470.1	gi|15921662|ref|NP_377331.1|	-	1.3	9.6	5.3	2.4	8.8	0.0	2.1	1	1	1	2	2	2	0	PIN	domain
MutS_IV	PF05190.13	gi|15921662|ref|NP_377331.1|	-	1.8	8.8	5.7	6.7	6.9	1.3	2.4	2	0	0	2	2	2	0	MutS	family	domain	IV
Ribosomal_S19e	PF01090.14	gi|15921663|ref|NP_377332.1|	-	5.3e-47	158.7	0.0	6e-47	158.5	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S19e
RuvB_C	PF05491.8	gi|15921663|ref|NP_377332.1|	-	0.069	12.7	0.0	0.13	11.9	0.0	1.4	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	ruvB	C-terminus
QRPTase_C	PF01729.14	gi|15921664|ref|NP_377333.1|	-	7.6e-22	77.6	0.0	1e-21	77.1	0.0	1.2	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
QRPTase_N	PF02749.11	gi|15921664|ref|NP_377333.1|	-	4.5e-05	23.1	0.0	8.4e-05	22.3	0.0	1.4	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
Antitoxin-MazE	PF04014.13	gi|15921665|ref|NP_377334.1|	-	8.9e-10	38.0	0.0	8.9e-09	34.8	0.0	2.5	2	0	0	2	2	2	1	Antidote-toxin	recognition	MazE
PhoU	PF01895.14	gi|15921665|ref|NP_377334.1|	-	0.00027	21.2	3.5	0.00027	21.2	2.5	2.7	3	0	0	3	3	3	2	PhoU	domain
Cytochrom_B562	PF07361.6	gi|15921665|ref|NP_377334.1|	-	0.022	15.1	0.2	0.21	12.0	0.1	2.3	2	0	0	2	2	2	0	Cytochrome	b562
Radical_SAM	PF04055.16	gi|15921665|ref|NP_377334.1|	-	0.11	12.6	0.2	1.2	9.2	0.1	2.2	1	1	0	2	2	2	0	Radical	SAM	superfamily
DUF711	PF05167.7	gi|15921666|ref|NP_377335.1|	-	1.6e-76	257.6	0.0	2e-76	257.3	0.0	1.0	1	0	0	1	1	1	1	Uncharacterised	ACR	(DUF711)
FAD_binding_1	PF00667.15	gi|15921666|ref|NP_377335.1|	-	0.15	11.4	0.0	0.33	10.3	0.0	1.5	2	0	0	2	2	2	0	FAD	binding	domain
DrsE_2	PF13686.1	gi|15921667|ref|NP_377336.1|	-	1.4e-16	60.5	1.3	4.6e-15	55.6	0.9	2.0	1	1	0	1	1	1	1	DsrE/DsrF/DrsH-like	family
DrsE	PF02635.10	gi|15921667|ref|NP_377336.1|	-	8.3e-07	29.0	0.1	1.2e-06	28.6	0.1	1.2	1	0	0	1	1	1	1	DsrE/DsrF-like	family
DUF2053	PF09767.4	gi|15921667|ref|NP_377336.1|	-	0.041	13.8	0.1	0.093	12.7	0.1	1.6	1	1	1	2	2	2	0	Predicted	membrane	protein	(DUF2053)
TusA	PF01206.12	gi|15921668|ref|NP_377337.1|	-	1e-12	47.4	0.1	1.2e-12	47.2	0.0	1.0	1	0	0	1	1	1	1	Sulfurtransferase	TusA
HA	PF03457.9	gi|15921668|ref|NP_377337.1|	-	0.057	13.5	0.4	0.09	12.8	0.1	1.5	2	0	0	2	2	2	0	Helicase	associated	domain
PALP	PF00291.20	gi|15921669|ref|NP_377338.1|	-	8.8e-53	179.5	0.0	1e-52	179.2	0.0	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
DUF3867	PF12983.2	gi|15921669|ref|NP_377338.1|	-	0.035	14.0	0.1	0.11	12.4	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3867)
RIO1	PF01163.17	gi|15921670|ref|NP_377339.1|	-	0.0068	15.7	0.0	0.066	12.5	0.0	2.1	1	1	0	1	1	1	1	RIO1	family
Pkinase	PF00069.20	gi|15921670|ref|NP_377339.1|	-	0.051	12.7	0.0	0.077	12.1	0.0	1.3	1	0	0	1	1	1	0	Protein	kinase	domain
Mob_synth_C	PF06463.8	gi|15921671|ref|NP_377340.1|	-	3.5e-29	101.0	0.1	5.4e-29	100.4	0.0	1.3	1	0	0	1	1	1	1	Molybdenum	Cofactor	Synthesis	C
Radical_SAM	PF04055.16	gi|15921671|ref|NP_377340.1|	-	1.9e-23	83.4	0.3	1.5e-22	80.4	0.0	2.1	1	1	1	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|15921671|ref|NP_377340.1|	-	3e-08	33.8	0.0	7.8e-08	32.5	0.0	1.7	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|15921671|ref|NP_377340.1|	-	7.1e-08	32.5	0.1	2.6e-07	30.6	0.0	1.9	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
RVT_thumb	PF06817.9	gi|15921671|ref|NP_377340.1|	-	0.038	13.5	0.1	2.2	7.9	0.0	2.5	2	0	0	2	2	2	0	Reverse	transcriptase	thumb	domain
Methyltrans_RNA	PF04452.9	gi|15921671|ref|NP_377340.1|	-	0.046	12.8	0.1	0.091	11.8	0.0	1.5	1	0	0	1	1	1	0	RNA	methyltransferase
Peptidase_M24	PF00557.19	gi|15921672|ref|NP_377341.1|	-	1.3e-62	211.0	0.9	1.9e-62	210.5	0.6	1.2	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.13	gi|15921672|ref|NP_377341.1|	-	4.4e-13	49.8	0.0	7.8e-13	49.0	0.0	1.4	1	0	0	1	1	1	1	Creatinase/Prolidase	N-terminal	domain
GTP_cyclohydroI	PF01227.17	gi|15921673|ref|NP_377342.1|	-	1.6e-61	206.7	0.0	2.1e-61	206.3	0.0	1.2	1	0	0	1	1	1	1	GTP	cyclohydrolase	I
FlpD	PF02662.11	gi|15921673|ref|NP_377342.1|	-	0.13	11.9	0.1	3.3	7.4	0.0	2.3	2	0	0	2	2	2	0	Methyl-viologen-reducing	hydrogenase,	delta	subunit
MarR	PF01047.17	gi|15921674|ref|NP_377343.1|	-	5.7e-09	35.5	0.3	1.5e-08	34.2	0.2	1.7	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.2	gi|15921674|ref|NP_377343.1|	-	8.3e-09	34.9	0.0	1.4e-08	34.2	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.1	gi|15921674|ref|NP_377343.1|	-	1.8e-08	33.6	2.7	2.2e-08	33.3	0.6	2.1	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_5	PF01022.15	gi|15921674|ref|NP_377343.1|	-	1.5e-05	24.5	0.2	5.6e-05	22.7	0.5	1.8	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_Crp_2	PF13545.1	gi|15921674|ref|NP_377343.1|	-	6.3e-05	22.6	0.0	0.00093	18.9	0.0	2.6	3	0	0	3	3	3	1	Crp-like	helix-turn-helix	domain
TrmB	PF01978.14	gi|15921674|ref|NP_377343.1|	-	9.6e-05	22.0	0.3	0.00025	20.7	0.2	1.6	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_45	PF14947.1	gi|15921674|ref|NP_377343.1|	-	0.00016	21.4	0.0	0.0044	16.7	0.0	2.7	2	1	0	2	2	2	1	Winged	helix-turn-helix
HTH_IclR	PF09339.5	gi|15921674|ref|NP_377343.1|	-	0.00017	21.1	0.0	0.0003	20.3	0.0	1.4	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
Cdc6_C	PF09079.6	gi|15921674|ref|NP_377343.1|	-	0.0013	18.3	0.1	0.011	15.4	0.0	2.2	2	0	0	2	2	2	1	CDC6,	C	terminal
HTH_27	PF13463.1	gi|15921674|ref|NP_377343.1|	-	0.0029	17.9	0.0	0.012	15.9	0.1	2.0	2	0	0	2	2	1	1	Winged	helix	DNA-binding	domain
Rio2_N	PF09202.6	gi|15921674|ref|NP_377343.1|	-	0.013	15.5	0.1	0.03	14.3	0.0	1.6	1	0	0	1	1	1	0	Rio2,	N-terminal
Glyco_trans_4_2	PF13477.1	gi|15921674|ref|NP_377343.1|	-	0.018	14.8	0.4	0.34	10.7	0.0	2.4	2	1	0	2	2	2	0	Glycosyl	transferase	4-like
B-block_TFIIIC	PF04182.7	gi|15921674|ref|NP_377343.1|	-	0.036	13.9	0.1	0.09	12.6	0.1	1.7	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
DUF2250	PF10007.4	gi|15921674|ref|NP_377343.1|	-	0.046	13.6	0.3	0.13	12.2	0.1	1.9	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
TFIIE_alpha	PF02002.12	gi|15921674|ref|NP_377343.1|	-	0.12	11.8	0.3	0.12	11.8	0.2	2.2	2	0	0	2	2	2	0	TFIIE	alpha	subunit
HxlR	PF01638.12	gi|15921674|ref|NP_377343.1|	-	0.13	11.9	0.3	0.29	10.7	0.2	1.6	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
Gln-synt_C	PF00120.19	gi|15921675|ref|NP_377344.1|	-	7.9e-100	333.2	0.0	9.8e-100	332.9	0.0	1.1	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.14	gi|15921675|ref|NP_377344.1|	-	8.7e-25	86.1	0.0	1.7e-24	85.2	0.0	1.5	1	0	0	1	1	1	1	Glutamine	synthetase,	beta-Grasp	domain
Thioredoxin	PF00085.15	gi|15921676|ref|NP_377345.1|	-	2.3e-23	81.8	0.1	2.5e-23	81.7	0.1	1.0	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.1	gi|15921676|ref|NP_377345.1|	-	3.7e-07	30.3	0.9	2.2e-06	27.8	0.6	1.8	1	1	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin_3	PF13192.1	gi|15921676|ref|NP_377345.1|	-	1.8e-06	27.6	0.1	2.1e-06	27.4	0.0	1.1	1	0	0	1	1	1	1	Thioredoxin	domain
Thioredoxin_8	PF13905.1	gi|15921676|ref|NP_377345.1|	-	6.7e-06	26.1	1.6	0.00077	19.5	0.1	2.3	2	1	1	3	3	2	2	Thioredoxin-like
Thioredoxin_9	PF14595.1	gi|15921676|ref|NP_377345.1|	-	0.00023	20.7	0.1	0.0003	20.3	0.1	1.1	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_7	PF13899.1	gi|15921676|ref|NP_377345.1|	-	0.0091	15.9	0.0	0.013	15.5	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin-like
Thioredoxin_6	PF13848.1	gi|15921676|ref|NP_377345.1|	-	0.013	15.3	0.1	0.015	15.1	0.0	1.1	1	0	0	1	1	1	0	Thioredoxin-like	domain
AhpC-TSA	PF00578.16	gi|15921676|ref|NP_377345.1|	-	0.019	14.6	0.6	3.7	7.2	0.2	2.1	1	1	1	2	2	2	0	AhpC/TSA	family
Thioredoxin_5	PF13743.1	gi|15921676|ref|NP_377345.1|	-	0.025	14.1	0.3	0.069	12.7	0.2	1.7	1	1	0	1	1	1	0	Thioredoxin
Redoxin	PF08534.5	gi|15921676|ref|NP_377345.1|	-	0.032	13.7	0.6	0.14	11.6	0.3	1.8	1	1	1	2	2	2	0	Redoxin
DSBA	PF01323.15	gi|15921676|ref|NP_377345.1|	-	0.039	13.4	1.4	0.25	10.9	0.0	2.0	1	1	1	2	2	2	0	DSBA-like	thioredoxin	domain
HyaE	PF07449.6	gi|15921676|ref|NP_377345.1|	-	0.1	12.5	0.0	0.16	11.9	0.0	1.4	1	1	0	1	1	1	0	Hydrogenase-1	expression	protein	HyaE
AMP-binding	PF00501.23	gi|15921677|ref|NP_377346.1|	-	2.1e-65	220.7	0.0	2.5e-65	220.5	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|15921677|ref|NP_377346.1|	-	1.4e-07	32.3	0.1	4.1e-07	30.8	0.1	1.9	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
GHMP_kinases_C	PF08544.8	gi|15921678|ref|NP_377347.1|	-	0.0001	22.4	0.0	0.00019	21.5	0.0	1.4	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
Nol1_Nop2_Fmu	PF01189.12	gi|15921679|ref|NP_377348.1|	-	2.3e-29	102.6	0.0	1.2e-28	100.3	0.0	2.0	2	1	0	2	2	2	1	NOL1/NOP2/sun	family
Methyltransf_31	PF13847.1	gi|15921679|ref|NP_377348.1|	-	3.2e-08	33.3	0.0	6.4e-08	32.3	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|15921679|ref|NP_377348.1|	-	5.1e-05	23.8	0.0	9.4e-05	22.9	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|15921679|ref|NP_377348.1|	-	6.8e-05	22.2	0.0	0.00011	21.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
PUA	PF01472.15	gi|15921679|ref|NP_377348.1|	-	0.00042	19.9	2.3	0.001	18.7	1.6	1.7	1	0	0	1	1	1	1	PUA	domain
Methyltransf_26	PF13659.1	gi|15921679|ref|NP_377348.1|	-	0.00096	19.1	0.0	0.0015	18.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.15	gi|15921679|ref|NP_377348.1|	-	0.015	14.4	0.1	2.1	7.3	0.0	2.2	2	0	0	2	2	2	0	Mycolic	acid	cyclopropane	synthetase
Methyltransf_11	PF08241.7	gi|15921679|ref|NP_377348.1|	-	0.016	15.6	0.0	0.059	13.8	0.0	1.9	1	1	0	1	1	1	0	Methyltransferase	domain
Methyltransf_4	PF02390.12	gi|15921679|ref|NP_377348.1|	-	0.033	13.2	0.1	0.18	10.8	0.0	2.2	2	1	0	2	2	2	0	Putative	methyltransferase
Methyltransf_5	PF01795.14	gi|15921679|ref|NP_377348.1|	-	0.033	13.4	0.0	0.063	12.5	0.0	1.4	2	0	0	2	2	2	0	MraW	methylase	family
FtsJ	PF01728.14	gi|15921679|ref|NP_377348.1|	-	0.051	13.5	0.0	0.086	12.8	0.0	1.3	1	0	0	1	1	1	0	FtsJ-like	methyltransferase
DUF2431	PF10354.4	gi|15921679|ref|NP_377348.1|	-	0.055	13.4	0.0	0.11	12.5	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF2431)
Methyltransf_25	PF13649.1	gi|15921679|ref|NP_377348.1|	-	0.11	12.9	0.0	0.17	12.2	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
Hexapep	PF00132.19	gi|15921680|ref|NP_377349.1|	-	9.5e-22	75.4	17.8	2e-08	33.3	2.0	4.5	3	1	2	5	5	5	4	Bacterial	transferase	hexapeptide	(six	repeats)
Hexapep_2	PF14602.1	gi|15921680|ref|NP_377349.1|	-	2.9e-09	36.3	10.5	3.8e-06	26.3	2.5	4.1	4	0	0	4	4	4	3	Hexapeptide	repeat	of	succinyl-transferase
TBPIP_N	PF15517.1	gi|15921681|ref|NP_377350.1|	-	0.0062	16.1	0.1	0.013	15.1	0.1	1.5	1	0	0	1	1	1	1	TBP-interacting	protein	N-terminus
Phage_integrase	PF00589.17	gi|15921682|ref|NP_377351.1|	-	5.4e-41	140.1	3.0	5.6e-41	140.0	0.9	1.8	2	0	0	2	2	2	1	Phage	integrase	family
Integrase_1	PF12835.2	gi|15921682|ref|NP_377351.1|	-	7.2e-10	38.9	0.4	1.2e-09	38.1	0.3	1.3	1	0	0	1	1	1	1	Integrase
Phage_int_SAM_4	PF13495.1	gi|15921682|ref|NP_377351.1|	-	7.6e-09	35.7	1.5	1.3e-05	25.4	0.0	2.9	2	1	1	3	3	3	2	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_1	PF02899.12	gi|15921682|ref|NP_377351.1|	-	6.9e-08	32.5	0.5	0.00068	19.7	0.0	3.0	2	1	1	3	3	3	2	Phage	integrase,	N-terminal	SAM-like	domain
Pyr_redox_2	PF07992.9	gi|15921683|ref|NP_377352.1|	-	0.013	15.4	0.7	0.18	11.6	0.5	2.6	1	1	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
VitK2_biosynth	PF02621.9	gi|15921684|ref|NP_377353.1|	-	0.018	14.2	0.1	1.7	7.7	0.0	2.8	1	1	1	3	3	3	0	Menaquinone	biosynthesis
T2SE	PF00437.15	gi|15921686|ref|NP_377355.1|	-	3.9e-41	140.7	0.0	5.8e-41	140.1	0.0	1.2	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
ABC_tran	PF00005.22	gi|15921686|ref|NP_377355.1|	-	0.00011	22.4	0.0	0.00045	20.5	0.0	2.0	2	1	0	2	2	2	1	ABC	transporter
Arch_ATPase	PF01637.13	gi|15921686|ref|NP_377355.1|	-	0.00042	20.0	1.0	0.0014	18.3	0.0	2.3	3	0	0	3	3	2	1	Archaeal	ATPase
AAA_29	PF13555.1	gi|15921686|ref|NP_377355.1|	-	0.00055	19.4	0.0	0.0016	17.9	0.0	1.7	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|15921686|ref|NP_377355.1|	-	0.00065	20.0	4.5	0.00065	20.0	3.1	2.8	2	1	0	2	2	2	1	AAA	domain
MobB	PF03205.9	gi|15921686|ref|NP_377355.1|	-	0.0016	18.1	0.0	0.006	16.2	0.0	2.0	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_16	PF13191.1	gi|15921686|ref|NP_377355.1|	-	0.0031	17.5	0.0	0.0097	15.9	0.0	1.6	1	1	0	2	2	2	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|15921686|ref|NP_377355.1|	-	0.0031	17.6	0.0	0.012	15.6	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_21	PF13304.1	gi|15921686|ref|NP_377355.1|	-	0.0039	17.1	0.1	0.0039	17.1	0.1	3.2	3	1	0	3	3	3	1	AAA	domain
SMC_N	PF02463.14	gi|15921686|ref|NP_377355.1|	-	0.0067	15.6	0.0	0.03	13.5	0.0	2.0	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
ResIII	PF04851.10	gi|15921686|ref|NP_377355.1|	-	0.0068	16.2	0.0	0.017	14.9	0.0	1.6	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
Adeno_IVa2	PF02456.10	gi|15921686|ref|NP_377355.1|	-	0.0073	15.0	0.0	0.01	14.4	0.0	1.3	1	0	0	1	1	1	1	Adenovirus	IVa2	protein
Miro	PF08477.8	gi|15921686|ref|NP_377355.1|	-	0.01	16.3	0.1	0.037	14.5	0.0	1.9	2	0	0	2	2	1	1	Miro-like	protein
RNA12	PF10443.4	gi|15921686|ref|NP_377355.1|	-	0.01	14.4	0.0	0.022	13.2	0.0	1.5	1	0	0	1	1	1	1	RNA12	protein
cobW	PF02492.14	gi|15921686|ref|NP_377355.1|	-	0.011	15.1	0.0	0.021	14.2	0.0	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_18	PF13238.1	gi|15921686|ref|NP_377355.1|	-	0.013	15.8	0.4	0.18	12.1	0.0	2.6	2	0	0	2	2	2	0	AAA	domain
AAA_10	PF12846.2	gi|15921686|ref|NP_377355.1|	-	0.025	14.0	0.2	0.053	12.9	0.1	1.8	1	1	0	1	1	1	0	AAA-like	domain
AAA_5	PF07728.9	gi|15921686|ref|NP_377355.1|	-	0.035	13.8	0.0	0.07	12.8	0.0	1.5	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_17	PF13207.1	gi|15921686|ref|NP_377355.1|	-	0.074	13.8	1.3	0.42	11.4	0.0	2.6	3	0	0	3	3	2	0	AAA	domain
MMR_HSR1	PF01926.18	gi|15921686|ref|NP_377355.1|	-	0.083	12.8	0.0	0.26	11.2	0.0	1.9	1	0	0	1	1	1	0	50S	ribosome-binding	GTPase
NACHT	PF05729.7	gi|15921686|ref|NP_377355.1|	-	0.084	12.5	0.0	0.17	11.4	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
AAA_14	PF13173.1	gi|15921686|ref|NP_377355.1|	-	0.34	10.7	4.9	0.67	9.8	0.0	2.8	3	0	0	3	3	3	0	AAA	domain
DUF1628	PF07790.6	gi|15921688|ref|NP_377357.1|	-	0.00075	20.2	3.3	0.0021	18.7	2.3	1.8	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1628)
MacB_PCD	PF12704.2	gi|15921688|ref|NP_377357.1|	-	0.0038	16.8	2.4	0.0047	16.5	1.7	1.2	1	0	0	1	1	1	1	MacB-like	periplasmic	core	domain
DUF4397	PF14344.1	gi|15921688|ref|NP_377357.1|	-	0.05	13.9	0.3	0.11	12.8	0.1	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4397)
HhH-GPD	PF00730.20	gi|15921690|ref|NP_377359.1|	-	1.8e-21	76.4	0.0	2.9e-21	75.7	0.0	1.5	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
HHH	PF00633.18	gi|15921690|ref|NP_377359.1|	-	0.00016	21.1	0.2	0.0061	16.2	0.0	3.1	3	0	0	3	3	3	1	Helix-hairpin-helix	motif
EndIII_4Fe-2S	PF10576.4	gi|15921690|ref|NP_377359.1|	-	0.036	14.2	7.8	0.066	13.4	5.4	1.5	1	0	0	1	1	1	0	Iron-sulfur	binding	domain	of	endonuclease	III
DUF2400	PF09674.5	gi|15921690|ref|NP_377359.1|	-	0.068	12.8	0.0	0.57	9.8	0.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2400)
ParBc	PF02195.13	gi|15921691|ref|NP_377360.1|	-	2.7e-10	40.1	0.0	5.2e-10	39.2	0.0	1.4	1	0	0	1	1	1	1	ParB-like	nuclease	domain
DUF1015	PF06245.6	gi|15921691|ref|NP_377360.1|	-	1.2e-05	23.9	0.0	0.025	13.0	0.0	2.1	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF1015)
Glyco_tranf_2_3	PF13641.1	gi|15921692|ref|NP_377361.1|	-	2.7e-25	89.4	0.0	4e-25	88.9	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|15921692|ref|NP_377361.1|	-	7.6e-21	74.7	0.1	7.6e-21	74.7	0.0	2.1	2	0	0	2	2	2	1	Glycosyl	transferase	family	group	2
Glycos_transf_2	PF00535.21	gi|15921692|ref|NP_377361.1|	-	3.5e-20	72.3	0.1	1.2e-19	70.6	0.0	1.8	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.1	gi|15921692|ref|NP_377361.1|	-	2.6e-12	46.3	0.0	5.8e-12	45.2	0.0	1.5	2	0	0	2	2	2	1	Glycosyl	transferase	family	21
Glyco_tranf_2_2	PF10111.4	gi|15921692|ref|NP_377361.1|	-	1.4e-09	37.5	0.1	2e-09	36.9	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Osmo_MPGsynth	PF09488.5	gi|15921692|ref|NP_377361.1|	-	0.037	12.7	0.3	0.053	12.1	0.2	1.1	1	0	0	1	1	1	0	Mannosyl-3-phosphoglycerate	synthase	(osmo_MPGsynth)
DUF1469	PF07332.6	gi|15921692|ref|NP_377361.1|	-	0.89	9.2	2.5	2.2	8.0	1.7	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1469)
DEAD_assoc	PF08494.6	gi|15921693|ref|NP_377362.1|	-	2e-58	197.2	0.4	4.3e-58	196.1	0.2	1.7	2	0	0	2	2	2	1	DEAD/H	associated
DEAD	PF00270.24	gi|15921693|ref|NP_377362.1|	-	2.1e-29	102.1	0.0	9.7e-28	96.7	0.0	2.8	2	1	1	3	3	3	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|15921693|ref|NP_377362.1|	-	1.6e-15	56.6	0.0	6.3e-15	54.8	0.0	2.0	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|15921693|ref|NP_377362.1|	-	3.1e-08	33.6	0.1	2e-07	31.0	0.0	2.3	3	0	0	3	3	3	1	Type	III	restriction	enzyme,	res	subunit
Transketolase_C	PF02780.15	gi|15921693|ref|NP_377362.1|	-	0.00032	20.6	0.7	0.013	15.4	0.0	2.6	2	0	0	2	2	2	1	Transketolase,	C-terminal	domain
SIS_2	PF13580.1	gi|15921693|ref|NP_377362.1|	-	0.11	12.1	0.2	0.32	10.7	0.0	1.8	2	0	0	2	2	2	0	SIS	domain
AAA_19	PF13245.1	gi|15921693|ref|NP_377362.1|	-	0.16	11.7	0.0	9.4	6.0	0.0	2.6	2	0	0	2	2	2	0	Part	of	AAA	domain
HrcA_DNA-bdg	PF03444.10	gi|15921694|ref|NP_377363.1|	-	1e-34	117.7	0.3	2.6e-34	116.5	0.2	1.7	1	0	0	1	1	1	1	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
CBS	PF00571.23	gi|15921694|ref|NP_377363.1|	-	5.1e-28	96.5	0.2	1.5e-12	47.1	0.0	2.5	2	0	0	2	2	2	2	CBS	domain
Rrf2	PF02082.15	gi|15921694|ref|NP_377363.1|	-	2.7e-08	33.8	0.0	8.5e-08	32.2	0.0	1.9	1	0	0	1	1	1	1	Transcriptional	regulator
TrmB	PF01978.14	gi|15921694|ref|NP_377363.1|	-	0.019	14.6	0.6	0.078	12.7	0.1	2.2	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.5	gi|15921694|ref|NP_377363.1|	-	0.042	13.4	0.0	0.1	12.2	0.0	1.7	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
DUF2097	PF09870.4	gi|15921694|ref|NP_377363.1|	-	0.075	13.1	1.8	2.4	8.3	0.0	2.5	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2097)
TFIIH_BTF_p62_N	PF08567.6	gi|15921694|ref|NP_377363.1|	-	0.085	12.5	0.0	0.19	11.4	0.0	1.5	1	0	0	1	1	1	0	TFIIH	p62	subunit,	N-terminal	domain
HTH_27	PF13463.1	gi|15921694|ref|NP_377363.1|	-	0.094	13.0	0.4	1.4	9.2	0.0	2.6	3	0	0	3	3	3	0	Winged	helix	DNA-binding	domain
Sigma70_r4	PF04545.11	gi|15921694|ref|NP_377363.1|	-	0.1	11.8	0.5	1.6	8.0	0.0	2.9	2	2	1	3	3	3	0	Sigma-70,	region	4
MarR_2	PF12802.2	gi|15921694|ref|NP_377363.1|	-	0.13	11.9	0.0	0.44	10.2	0.0	1.9	2	0	0	2	2	2	0	MarR	family
PRC	PF05239.11	gi|15921694|ref|NP_377363.1|	-	0.19	11.6	9.0	12	5.9	0.1	4.2	4	0	0	4	4	4	0	PRC-barrel	domain
DUF2192	PF09958.4	gi|15921695|ref|NP_377364.1|	-	1.1e-83	280.0	5.6	1.2e-83	279.8	3.9	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2192)
GerPC	PF10737.4	gi|15921697|ref|NP_377366.1|	-	0.044	13.5	0.4	0.058	13.1	0.3	1.1	1	0	0	1	1	1	0	Spore	germination	protein	GerPC
Snapin_Pallidin	PF14712.1	gi|15921697|ref|NP_377366.1|	-	0.054	13.8	0.8	0.074	13.3	0.6	1.2	1	0	0	1	1	1	0	Snapin/Pallidin
CENP-F_leu_zip	PF10473.4	gi|15921697|ref|NP_377366.1|	-	0.057	13.2	1.6	0.078	12.8	1.1	1.2	1	0	0	1	1	1	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
GvpK	PF05121.7	gi|15921697|ref|NP_377366.1|	-	0.071	12.9	0.4	0.1	12.4	0.3	1.2	1	0	0	1	1	1	0	Gas	vesicle	protein	K
GP41	PF00517.12	gi|15921697|ref|NP_377366.1|	-	0.096	12.2	2.1	0.12	11.8	1.5	1.1	1	0	0	1	1	1	0	Retroviral	envelope	protein
DivIC	PF04977.10	gi|15921697|ref|NP_377366.1|	-	0.22	11.0	1.5	0.34	10.4	1.1	1.3	1	0	0	1	1	1	0	Septum	formation	initiator
Fzo_mitofusin	PF04799.8	gi|15921697|ref|NP_377366.1|	-	0.43	9.9	2.3	0.71	9.2	1.6	1.5	1	1	0	1	1	1	0	fzo-like	conserved	region
HTH_3	PF01381.17	gi|15921698|ref|NP_377367.1|	-	1.8e-09	37.2	0.1	3.1e-09	36.5	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.2	gi|15921698|ref|NP_377367.1|	-	8.5e-06	25.7	0.3	1.6e-05	24.8	0.2	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_31	PF13560.1	gi|15921698|ref|NP_377367.1|	-	3e-05	24.1	0.0	3.9e-05	23.7	0.0	1.1	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|15921698|ref|NP_377367.1|	-	6.1e-05	22.5	0.0	0.00011	21.6	0.0	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.1	gi|15921698|ref|NP_377367.1|	-	0.0001	22.1	0.0	0.0002	21.2	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_Tnp_ISL3	PF13542.1	gi|15921698|ref|NP_377367.1|	-	0.00014	20.9	0.0	0.00031	19.8	0.0	1.6	2	0	0	2	2	2	1	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_24	PF13412.1	gi|15921698|ref|NP_377367.1|	-	0.00028	20.2	0.3	0.00076	18.8	0.2	1.8	1	1	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|15921698|ref|NP_377367.1|	-	0.00073	19.1	1.0	0.0013	18.3	0.1	1.9	2	0	0	2	2	2	1	HTH	domain
Trp_repressor	PF01371.14	gi|15921698|ref|NP_377367.1|	-	0.0011	18.8	0.0	0.0022	17.8	0.0	1.5	1	1	0	1	1	1	1	Trp	repressor	protein
Fe_dep_repress	PF01325.14	gi|15921698|ref|NP_377367.1|	-	0.0017	18.2	0.0	0.014	15.3	0.0	2.1	2	0	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_AsnC-type	PF13404.1	gi|15921698|ref|NP_377367.1|	-	0.0017	17.8	0.6	0.022	14.2	0.4	2.3	1	1	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
MarR_2	PF12802.2	gi|15921698|ref|NP_377367.1|	-	0.0018	17.9	0.0	0.0027	17.3	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_26	PF13443.1	gi|15921698|ref|NP_377367.1|	-	0.0019	18.3	0.0	0.0033	17.5	0.0	1.4	1	0	0	1	1	1	1	Cro/C1-type	HTH	DNA-binding	domain
HTH_10	PF04967.7	gi|15921698|ref|NP_377367.1|	-	0.0032	17.0	0.0	0.0081	15.7	0.0	1.6	1	0	0	1	1	1	1	HTH	DNA	binding	domain
HTH_Tnp_1	PF01527.15	gi|15921698|ref|NP_377367.1|	-	0.0037	17.1	0.1	0.0082	16.0	0.0	1.6	1	1	0	1	1	1	1	Transposase
HTH_5	PF01022.15	gi|15921698|ref|NP_377367.1|	-	0.0038	16.8	0.1	0.0081	15.8	0.0	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
Sigma70_r4_2	PF08281.7	gi|15921698|ref|NP_377367.1|	-	0.0089	15.4	0.1	0.018	14.5	0.1	1.6	1	0	0	1	1	1	1	Sigma-70,	region	4
IF2_N	PF04760.10	gi|15921698|ref|NP_377367.1|	-	0.009	15.6	0.2	0.054	13.1	0.2	2.3	1	1	0	1	1	1	1	Translation	initiation	factor	IF-2,	N-terminal	region
NUMOD1	PF07453.8	gi|15921698|ref|NP_377367.1|	-	0.0093	15.7	0.0	0.026	14.3	0.0	1.8	1	0	0	1	1	1	1	NUMOD1	domain
HTH_7	PF02796.10	gi|15921698|ref|NP_377367.1|	-	0.014	15.2	0.0	0.027	14.3	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	resolvase
LacI	PF00356.16	gi|15921698|ref|NP_377367.1|	-	0.015	14.9	0.0	0.093	12.3	0.0	2.3	2	1	1	3	3	3	0	Bacterial	regulatory	proteins,	lacI	family
HTH_29	PF13551.1	gi|15921698|ref|NP_377367.1|	-	0.021	14.9	0.0	0.066	13.3	0.0	1.8	1	1	0	1	1	1	0	Winged	helix-turn	helix
HTH_38	PF13936.1	gi|15921698|ref|NP_377367.1|	-	0.027	14.0	0.1	0.027	14.0	0.1	1.8	2	1	0	2	2	1	0	Helix-turn-helix	domain
MarR	PF01047.17	gi|15921698|ref|NP_377367.1|	-	0.029	14.0	0.0	0.056	13.1	0.0	1.5	1	0	0	1	1	1	0	MarR	family
AAA_30	PF13604.1	gi|15921698|ref|NP_377367.1|	-	0.046	13.2	0.0	0.052	13.1	0.0	1.1	1	0	0	1	1	1	0	AAA	domain
HTH_17	PF12728.2	gi|15921698|ref|NP_377367.1|	-	0.052	13.8	0.0	0.36	11.1	0.0	2.2	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_40	PF14493.1	gi|15921698|ref|NP_377367.1|	-	0.055	13.7	2.5	0.094	12.9	1.7	1.5	1	1	0	1	1	1	0	Helix-turn-helix	domain
Cas_NE0113	PF09623.5	gi|15921698|ref|NP_377367.1|	-	0.07	12.5	0.0	0.091	12.2	0.0	1.2	1	0	0	1	1	1	0	CRISPR-associated	protein	NE0113	(Cas_NE0113)
Mga	PF05043.8	gi|15921698|ref|NP_377367.1|	-	0.087	13.1	0.9	3	8.2	0.0	2.2	1	1	1	2	2	2	0	Mga	helix-turn-helix	domain
DUF4445	PF14574.1	gi|15921698|ref|NP_377367.1|	-	0.099	10.8	0.2	0.14	10.3	0.1	1.2	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4445)
HTH_6	PF01418.12	gi|15921698|ref|NP_377367.1|	-	0.12	12.1	0.0	0.29	10.8	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain,	rpiR	family
HTH_8	PF02954.14	gi|15921698|ref|NP_377367.1|	-	0.29	10.6	0.1	0.29	10.6	0.0	2.0	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	Fis	family
Aminotran_1_2	PF00155.16	gi|15921700|ref|NP_377369.1|	-	3e-38	131.6	0.0	3.4e-38	131.5	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_MocR	PF12897.2	gi|15921700|ref|NP_377369.1|	-	4.7e-14	51.7	0.0	6.8e-14	51.2	0.0	1.2	1	0	0	1	1	1	1	Alanine-glyoxylate	amino-transferase
DegT_DnrJ_EryC1	PF01041.12	gi|15921700|ref|NP_377369.1|	-	0.0022	17.1	0.0	0.0042	16.1	0.0	1.4	1	1	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Beta_elim_lyase	PF01212.16	gi|15921700|ref|NP_377369.1|	-	0.012	14.7	0.0	0.032	13.3	0.0	1.6	2	0	0	2	2	2	0	Beta-eliminating	lyase
Cys_Met_Meta_PP	PF01053.15	gi|15921700|ref|NP_377369.1|	-	0.028	12.7	0.0	0.037	12.3	0.0	1.2	1	0	0	1	1	1	0	Cys/Met	metabolism	PLP-dependent	enzyme
MoCF_biosynth	PF00994.19	gi|15921702|ref|NP_377371.1|	-	1.8e-32	111.7	0.4	3.4e-32	110.8	0.0	1.6	2	0	0	2	2	2	1	Probable	molybdopterin	binding	domain
VirArc_Nuclease	PF12187.3	gi|15921702|ref|NP_377371.1|	-	0.0086	15.4	0.1	0.017	14.5	0.0	1.5	2	0	0	2	2	2	1	Viral/Archaeal	nuclease
MT	PF12777.2	gi|15921702|ref|NP_377371.1|	-	0.091	11.4	0.0	0.12	11.1	0.0	1.2	1	0	0	1	1	1	0	Microtubule-binding	stalk	of	dynein	motor
Abhydrolase_6	PF12697.2	gi|15921703|ref|NP_377372.1|	-	4.4e-34	118.3	0.0	5.3e-34	118.0	0.0	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|15921703|ref|NP_377372.1|	-	1.5e-20	73.7	0.0	2.9e-20	72.8	0.0	1.4	1	1	0	1	1	1	1	alpha/beta	hydrolase	fold
Abhydrolase_5	PF12695.2	gi|15921703|ref|NP_377372.1|	-	1.2e-16	60.7	0.0	4e-16	59.0	0.0	1.7	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Hydrolase_4	PF12146.3	gi|15921703|ref|NP_377372.1|	-	2.5e-06	27.2	0.0	5.4e-06	26.1	0.0	1.6	1	1	0	1	1	1	1	Putative	lysophospholipase
Ndr	PF03096.9	gi|15921703|ref|NP_377372.1|	-	0.019	13.4	0.0	0.046	12.2	0.0	1.6	1	1	0	1	1	1	0	Ndr	family
DUF915	PF06028.6	gi|15921703|ref|NP_377372.1|	-	0.043	12.8	0.1	0.19	10.8	0.0	2.0	2	0	0	2	2	2	0	Alpha/beta	hydrolase	of	unknown	function	(DUF915)
Thioesterase	PF00975.15	gi|15921703|ref|NP_377372.1|	-	0.049	13.8	0.0	0.063	13.4	0.0	1.2	1	0	0	1	1	1	0	Thioesterase	domain
DUF2305	PF10230.4	gi|15921703|ref|NP_377372.1|	-	0.069	12.5	0.2	0.2	11.0	0.1	1.8	1	1	1	2	2	2	0	Uncharacterised	conserved	protein	(DUF2305)
B5	PF03484.10	gi|15921704|ref|NP_377373.1|	-	6.4e-20	70.7	3.8	2.1e-18	65.9	0.4	3.1	3	0	0	3	3	3	2	tRNA	synthetase	B5	domain
B3_4	PF03483.12	gi|15921704|ref|NP_377373.1|	-	1.3e-12	47.5	0.1	2.8e-12	46.4	0.1	1.5	1	0	0	1	1	1	1	B3/4	domain
tRNA-synt_2d	PF01409.15	gi|15921704|ref|NP_377373.1|	-	0.067	12.3	0.0	0.13	11.3	0.0	1.4	1	0	0	1	1	1	0	tRNA	synthetases	class	II	core	domain	(F)
tRNA-synt_2d	PF01409.15	gi|15921705|ref|NP_377374.1|	-	6.2e-84	281.0	0.0	9.1e-84	280.5	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	II	core	domain	(F)
TrmB	PF01978.14	gi|15921705|ref|NP_377374.1|	-	6.2e-09	35.4	2.0	6.2e-09	35.4	1.4	3.1	3	0	0	3	3	2	1	Sugar-specific	transcriptional	regulator	TrmB
tRNA-synt_2	PF00152.15	gi|15921705|ref|NP_377374.1|	-	1.8e-08	33.5	0.7	0.011	14.5	0.0	3.3	3	0	0	3	3	3	2	tRNA	synthetases	class	II	(D,	K	and	N)
HTH_24	PF13412.1	gi|15921705|ref|NP_377374.1|	-	1.7e-06	27.2	0.7	5e-06	25.7	0.5	1.9	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_34	PF13601.1	gi|15921705|ref|NP_377374.1|	-	1.2e-05	25.2	0.1	3e-05	23.9	0.0	1.7	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
tRNA-synt_2b	PF00587.20	gi|15921705|ref|NP_377374.1|	-	1.3e-05	24.8	0.1	0.0001	21.9	0.0	2.3	1	1	1	2	2	2	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
DUF2250	PF10007.4	gi|15921705|ref|NP_377374.1|	-	2.5e-05	24.1	1.2	2.5e-05	24.1	0.8	2.3	2	0	0	2	2	2	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_27	PF13463.1	gi|15921705|ref|NP_377374.1|	-	0.00031	21.0	0.3	0.0026	18.0	0.0	2.8	3	0	0	3	3	2	1	Winged	helix	DNA-binding	domain
HTH_45	PF14947.1	gi|15921705|ref|NP_377374.1|	-	0.0015	18.2	0.4	0.0015	18.2	0.3	2.2	2	0	0	2	2	2	1	Winged	helix-turn-helix
FeoC	PF09012.5	gi|15921705|ref|NP_377374.1|	-	0.0047	16.5	0.1	0.01	15.5	0.1	1.5	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
MarR	PF01047.17	gi|15921705|ref|NP_377374.1|	-	0.0069	16.0	0.1	0.0069	16.0	0.0	2.0	2	0	0	2	2	1	1	MarR	family
Penicillinase_R	PF03965.11	gi|15921705|ref|NP_377374.1|	-	0.018	15.1	0.1	0.21	11.6	0.1	2.4	2	0	0	2	2	2	0	Penicillinase	repressor
TFIIE_alpha	PF02002.12	gi|15921705|ref|NP_377374.1|	-	0.019	14.4	3.7	0.075	12.5	1.7	2.6	2	0	0	2	2	2	0	TFIIE	alpha	subunit
HTH_36	PF13730.1	gi|15921705|ref|NP_377374.1|	-	0.042	13.9	0.2	0.088	12.9	0.2	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|15921705|ref|NP_377374.1|	-	0.051	13.7	0.1	0.14	12.2	0.1	1.7	1	0	0	1	1	1	0	Transcriptional	regulator
F-112	PF09645.5	gi|15921705|ref|NP_377374.1|	-	0.058	13.2	0.3	0.13	12.1	0.2	1.6	1	0	0	1	1	1	0	F-112	protein
MarR_2	PF12802.2	gi|15921705|ref|NP_377374.1|	-	0.059	13.0	0.0	0.18	11.5	0.0	1.8	1	0	0	1	1	1	0	MarR	family
FUN14	PF04930.10	gi|15921705|ref|NP_377374.1|	-	0.065	13.5	0.6	11	6.3	0.0	2.5	2	0	0	2	2	2	0	FUN14	family
HTH_IclR	PF09339.5	gi|15921705|ref|NP_377374.1|	-	0.078	12.5	0.0	0.23	11.0	0.0	1.8	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
Mrr_N	PF14338.1	gi|15921705|ref|NP_377374.1|	-	0.078	13.0	1.5	1.2	9.2	0.2	3.3	3	1	0	3	3	2	0	Mrr	N-terminal	domain
B-block_TFIIIC	PF04182.7	gi|15921705|ref|NP_377374.1|	-	0.26	11.1	2.2	1.3	8.8	0.1	2.7	3	0	0	3	3	3	0	B-block	binding	subunit	of	TFIIIC
Lactamase_B_3	PF13483.1	gi|15921707|ref|NP_377376.1|	-	1.1e-21	77.2	0.1	1.5e-21	76.7	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.2	gi|15921707|ref|NP_377376.1|	-	6.2e-17	61.7	0.2	7.7e-17	61.4	0.1	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|15921707|ref|NP_377376.1|	-	1.8e-08	34.2	0.9	2.6e-08	33.7	0.6	1.2	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Peptidase_M24	PF00557.19	gi|15921708|ref|NP_377377.1|	-	6.3e-47	159.8	0.1	7.4e-47	159.5	0.0	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
DUF1512	PF07431.7	gi|15921709|ref|NP_377378.1|	-	1.5e-136	454.7	9.0	1.8e-136	454.6	6.2	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1512)
HD	PF01966.17	gi|15921710|ref|NP_377379.1|	-	1.5e-06	28.1	0.2	5.6e-06	26.3	0.0	2.0	2	0	0	2	2	2	1	HD	domain
Hydrolase_3	PF08282.7	gi|15921711|ref|NP_377380.1|	-	1.6e-20	73.8	0.7	1.8e-20	73.6	0.5	1.0	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
S6PP	PF05116.8	gi|15921711|ref|NP_377380.1|	-	2.7e-06	26.8	0.0	3e-06	26.7	0.0	1.0	1	0	0	1	1	1	1	Sucrose-6F-phosphate	phosphohydrolase
Hydrolase_like	PF13242.1	gi|15921711|ref|NP_377380.1|	-	0.0022	17.6	0.0	0.0034	17.0	0.0	1.4	1	0	0	1	1	1	1	HAD-hyrolase-like
tRNA-synt_1c	PF00749.16	gi|15921712|ref|NP_377381.1|	-	6.1e-81	271.5	0.3	1.5e-80	270.2	0.0	1.8	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
tRNA-synt_1c_C	PF03950.13	gi|15921712|ref|NP_377381.1|	-	3.4e-23	82.2	0.0	8.7e-23	80.8	0.0	1.7	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(E	and	Q),	anti-codon	binding	domain
tRNA-synt_1e	PF01406.14	gi|15921712|ref|NP_377381.1|	-	0.0044	16.1	0.1	0.018	14.1	0.1	2.0	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(C)	catalytic	domain
Ribosomal_L7Ae	PF01248.21	gi|15921713|ref|NP_377382.1|	-	1.4e-33	114.3	1.4	1.7e-33	114.0	1.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
RNase_P_pop3	PF08228.6	gi|15921713|ref|NP_377382.1|	-	0.00065	19.5	0.0	0.00076	19.3	0.0	1.1	1	0	0	1	1	1	1	RNase	P	subunit	Pop3
PELOTA_1	PF15608.1	gi|15921713|ref|NP_377382.1|	-	0.0009	18.9	0.1	0.0012	18.5	0.1	1.2	1	0	0	1	1	1	1	PELOTA	RNA	binding	domain
DUF1269	PF06897.7	gi|15921713|ref|NP_377382.1|	-	0.017	15.1	0.4	4.7	7.2	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1269)
DbpA	PF03880.10	gi|15921713|ref|NP_377382.1|	-	0.035	13.7	0.0	0.37	10.4	0.0	2.4	2	1	0	2	2	2	0	DbpA	RNA	binding	domain
Glycos_transf_1	PF00534.15	gi|15921714|ref|NP_377383.1|	-	6.5e-13	48.4	0.2	1e-12	47.7	0.2	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|15921714|ref|NP_377383.1|	-	1.1e-11	45.0	0.0	2.4e-09	37.4	0.0	2.3	2	0	0	2	2	2	2	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|15921714|ref|NP_377383.1|	-	0.0095	15.6	0.0	0.58	9.8	0.0	2.4	1	1	0	1	1	1	1	Glycosyltransferase	Family	4
DNA_pol_B	PF00136.16	gi|15921715|ref|NP_377384.1|	-	6.2e-97	325.2	2.4	6.2e-97	325.2	1.7	1.6	2	0	0	2	2	2	1	DNA	polymerase	family	B
DNA_pol_B_exo1	PF03104.14	gi|15921715|ref|NP_377384.1|	-	4.3e-33	114.5	5.1	4.3e-33	114.5	3.5	2.1	2	1	0	2	2	2	1	DNA	polymerase	family	B,	exonuclease	domain
DNA_pol_B_exo2	PF10108.4	gi|15921715|ref|NP_377384.1|	-	2.3e-07	30.5	0.0	5.5e-07	29.3	0.0	1.6	1	0	0	1	1	1	1	Predicted	3'-5'	exonuclease	related	to	the	exonuclease	domain	of	PolB
RNase_H_2	PF13482.1	gi|15921715|ref|NP_377384.1|	-	6.9e-07	29.2	1.1	6.9e-07	29.2	0.7	3.2	3	1	0	3	3	3	1	RNase_H	superfamily
DUF4050	PF13259.1	gi|15921715|ref|NP_377384.1|	-	0.077	12.9	0.1	0.26	11.2	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4050)
ACT_6	PF13740.1	gi|15921715|ref|NP_377384.1|	-	0.16	11.7	0.0	0.44	10.3	0.0	1.7	1	0	0	1	1	1	0	ACT	domain
DUF2286	PF10051.4	gi|15921716|ref|NP_377385.1|	-	3.9e-57	191.8	7.7	4.3e-57	191.7	5.3	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2286)
DUF1626	PF07788.6	gi|15921716|ref|NP_377385.1|	-	0.015	15.0	0.0	0.06	13.1	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1626)
Methyltransf_31	PF13847.1	gi|15921717|ref|NP_377386.1|	-	3.7e-13	49.3	0.1	5.1e-13	48.8	0.1	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|15921717|ref|NP_377386.1|	-	3.5e-10	40.4	0.0	5e-10	39.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|15921717|ref|NP_377386.1|	-	1e-09	37.9	0.2	1.3e-09	37.5	0.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_4	PF02390.12	gi|15921717|ref|NP_377386.1|	-	1.2e-09	37.5	0.1	1.5e-09	37.2	0.1	1.2	1	0	0	1	1	1	1	Putative	methyltransferase
DOT1	PF08123.8	gi|15921717|ref|NP_377386.1|	-	1.5e-08	34.2	0.0	7.3e-08	31.9	0.0	1.8	1	1	0	1	1	1	1	Histone	methylation	protein	DOT1
Methyltransf_26	PF13659.1	gi|15921717|ref|NP_377386.1|	-	2.6e-07	30.6	0.0	3.4e-07	30.3	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.15	gi|15921717|ref|NP_377386.1|	-	7.2e-07	28.5	0.0	8.7e-07	28.2	0.0	1.1	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
MTS	PF05175.9	gi|15921717|ref|NP_377386.1|	-	1.2e-06	28.0	0.0	1.6e-06	27.6	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_25	PF13649.1	gi|15921717|ref|NP_377386.1|	-	1.4e-06	28.5	0.0	1.9e-06	28.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Met_10	PF02475.11	gi|15921717|ref|NP_377386.1|	-	1.6e-06	27.8	0.2	2e-06	27.5	0.1	1.1	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_11	PF08241.7	gi|15921717|ref|NP_377386.1|	-	6.3e-06	26.5	0.0	9.3e-06	26.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|15921717|ref|NP_377386.1|	-	7.6e-05	22.3	0.0	8.1e-05	22.2	0.0	1.2	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
tRNA_U5-meth_tr	PF05958.6	gi|15921717|ref|NP_377386.1|	-	0.00011	20.9	0.1	0.00014	20.6	0.0	1.2	1	0	0	1	1	1	1	tRNA	(Uracil-5-)-methyltransferase
UPF0020	PF01170.13	gi|15921717|ref|NP_377386.1|	-	0.00018	21.1	0.0	0.00025	20.6	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_12	PF08242.7	gi|15921717|ref|NP_377386.1|	-	0.00023	21.5	0.1	0.00048	20.5	0.1	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
N6_Mtase	PF02384.11	gi|15921717|ref|NP_377386.1|	-	0.00095	18.3	0.0	0.0012	18.0	0.0	1.1	1	0	0	1	1	1	1	N-6	DNA	Methylase
DUF633	PF04816.7	gi|15921717|ref|NP_377386.1|	-	0.0012	18.2	0.3	0.0039	16.5	0.1	1.7	1	1	1	2	2	2	1	Family	of	unknown	function	(DUF633)
MetW	PF07021.7	gi|15921717|ref|NP_377386.1|	-	0.0016	17.8	0.0	0.0021	17.4	0.0	1.3	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
N6_N4_Mtase	PF01555.13	gi|15921717|ref|NP_377386.1|	-	0.0039	16.7	0.0	0.0073	15.8	0.0	1.4	2	0	0	2	2	2	1	DNA	methylase
TehB	PF03848.9	gi|15921717|ref|NP_377386.1|	-	0.0051	16.0	0.0	0.0066	15.6	0.0	1.1	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
PCMT	PF01135.14	gi|15921717|ref|NP_377386.1|	-	0.016	14.7	0.0	0.02	14.4	0.0	1.3	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_23	PF13489.1	gi|15921717|ref|NP_377386.1|	-	0.031	13.9	0.1	0.047	13.3	0.1	1.4	1	1	0	1	1	1	0	Methyltransferase	domain
Methyltransf_32	PF13679.1	gi|15921717|ref|NP_377386.1|	-	0.056	13.1	0.0	0.066	12.8	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
RrnaAD	PF00398.15	gi|15921717|ref|NP_377386.1|	-	0.059	12.3	0.1	0.08	11.9	0.0	1.2	1	1	0	1	1	1	0	Ribosomal	RNA	adenine	dimethylase
Ribonuc_L-PSP	PF01042.16	gi|15921718|ref|NP_377387.1|	-	0.094	12.4	0.0	0.15	11.8	0.0	1.3	1	0	0	1	1	1	0	Endoribonuclease	L-PSP
CDP-OH_P_transf	PF01066.16	gi|15921719|ref|NP_377388.1|	-	2.7e-11	43.6	16.2	2.7e-10	40.4	11.2	2.1	1	1	0	1	1	1	1	CDP-alcohol	phosphatidyltransferase
DNA_primase_lrg	PF04104.9	gi|15921720|ref|NP_377389.1|	-	1.3e-11	44.3	7.0	1.3e-09	37.7	2.0	2.8	2	1	0	2	2	2	1	Eukaryotic	and	archaeal	DNA	primase,	large	subunit
DUF1874	PF08960.5	gi|15921720|ref|NP_377389.1|	-	0.086	12.5	2.1	0.12	12.1	0.3	2.1	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF1874)
tRNA-synt_1g	PF09334.6	gi|15921721|ref|NP_377390.1|	-	2.7e-147	490.5	0.0	3.5e-147	490.1	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(M)
tRNA-synt_1	PF00133.17	gi|15921721|ref|NP_377390.1|	-	2.1e-11	42.5	0.2	1.4e-05	23.3	0.0	2.9	2	1	1	3	3	3	2	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|15921721|ref|NP_377390.1|	-	2.5e-05	24.0	0.2	4.4e-05	23.2	0.1	1.4	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
DZR	PF12773.2	gi|15921721|ref|NP_377390.1|	-	0.02	14.7	2.4	0.037	13.8	1.7	1.5	1	0	0	1	1	1	0	Double	zinc	ribbon
V_ATPase_I	PF01496.14	gi|15921722|ref|NP_377391.1|	-	7.6e-68	229.0	17.9	3.3e-66	223.6	12.4	2.2	1	1	0	1	1	1	1	V-type	ATPase	116kDa	subunit	family
PhoU	PF01895.14	gi|15921722|ref|NP_377391.1|	-	0.088	13.2	2.9	0.24	11.8	0.4	2.5	2	0	0	2	2	2	0	PhoU	domain
DUF972	PF06156.8	gi|15921722|ref|NP_377391.1|	-	0.097	13.0	3.9	1.8	8.9	0.3	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF972)
Occludin_ELL	PF07303.8	gi|15921722|ref|NP_377391.1|	-	0.14	12.9	2.5	9.9	6.9	0.0	2.5	2	0	0	2	2	2	0	Occludin	homology	domain
DUF4200	PF13863.1	gi|15921722|ref|NP_377391.1|	-	0.33	10.9	8.2	1	9.3	0.1	2.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4200)
ATP-synt_F	PF01990.12	gi|15921723|ref|NP_377392.1|	-	3.6e-16	59.3	0.1	3.9e-16	59.2	0.1	1.0	1	0	0	1	1	1	1	ATP	synthase	(F/14-kDa)	subunit
DUF1829	PF08862.5	gi|15921723|ref|NP_377392.1|	-	0.011	15.9	0.1	0.015	15.5	0.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF1829
vATP-synt_E	PF01991.13	gi|15921724|ref|NP_377393.1|	-	3.6e-09	36.1	9.5	5.8e-09	35.5	6.6	1.3	1	0	0	1	1	1	1	ATP	synthase	(E/31	kDa)	subunit
OSCP	PF00213.13	gi|15921724|ref|NP_377393.1|	-	0.028	14.2	3.8	0.046	13.5	0.1	2.4	2	1	0	2	2	2	0	ATP	synthase	delta	(OSCP)	subunit
ISG65-75	PF11727.3	gi|15921724|ref|NP_377393.1|	-	0.031	13.3	3.5	0.045	12.7	2.4	1.3	1	0	0	1	1	1	0	Invariant	surface	glycoprotein
OmpH	PF03938.9	gi|15921724|ref|NP_377393.1|	-	0.19	11.6	2.8	0.13	12.1	0.7	1.7	2	0	0	2	2	2	0	Outer	membrane	protein	(OmpH-like)
DUF445	PF04286.7	gi|15921724|ref|NP_377393.1|	-	0.7	9.3	6.4	1.4	8.3	4.4	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF445)
DUF939_C	PF11728.3	gi|15921724|ref|NP_377393.1|	-	0.95	9.2	7.3	0.28	11.0	2.5	2.0	2	1	0	2	2	2	0	DUF939	C-terminal	domain
Rsbr_N	PF08678.5	gi|15921724|ref|NP_377393.1|	-	1.2	9.0	6.9	0.33	10.8	0.6	2.6	2	1	0	3	3	3	0	Rsbr	N	terminal
ATP-synt_ab	PF00006.20	gi|15921725|ref|NP_377394.1|	-	1.2e-88	296.1	0.0	1.7e-88	295.6	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_C	PF00306.22	gi|15921725|ref|NP_377394.1|	-	1.8e-21	76.7	1.5	3e-21	76.0	1.0	1.3	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	chain,	C	terminal	domain
ATP-synt_ab_N	PF02874.18	gi|15921725|ref|NP_377394.1|	-	1.4e-12	47.6	0.7	3.7e-12	46.2	0.5	1.8	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
Peptidase_M23	PF01551.17	gi|15921725|ref|NP_377394.1|	-	0.016	15.2	0.0	2.6	8.1	0.0	2.6	2	0	0	2	2	2	0	Peptidase	family	M23
AAA_22	PF13401.1	gi|15921725|ref|NP_377394.1|	-	0.021	14.9	0.5	0.063	13.4	0.1	2.1	2	1	0	2	2	2	0	AAA	domain
KaiC	PF06745.8	gi|15921725|ref|NP_377394.1|	-	0.064	12.3	0.0	0.11	11.6	0.0	1.4	1	0	0	1	1	1	0	KaiC
ATP-synt_ab	PF00006.20	gi|15921726|ref|NP_377395.1|	-	1.1e-59	201.4	0.0	1.5e-59	201.0	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_C	PF00306.22	gi|15921726|ref|NP_377395.1|	-	1.3e-12	48.1	0.0	2.4e-12	47.2	0.0	1.4	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	chain,	C	terminal	domain
ATP-synt_ab_N	PF02874.18	gi|15921726|ref|NP_377395.1|	-	1e-11	44.8	0.4	2.4e-11	43.6	0.3	1.7	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
HAS-barrel	PF09378.5	gi|15921726|ref|NP_377395.1|	-	0.0015	18.4	0.3	0.004	17.0	0.2	1.8	1	0	0	1	1	1	1	HAS	barrel	domain
ATP-synt_D	PF01813.12	gi|15921727|ref|NP_377396.1|	-	6.3e-51	172.7	3.8	7.1e-51	172.5	2.6	1.0	1	0	0	1	1	1	1	ATP	synthase	subunit	D
MAGE	PF01454.14	gi|15921727|ref|NP_377396.1|	-	0.02	14.2	0.1	0.03	13.6	0.0	1.6	1	1	0	1	1	1	0	MAGE	family
DUF4413	PF14372.1	gi|15921727|ref|NP_377396.1|	-	0.51	10.3	3.5	6.7	6.7	0.7	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4413)
ATP-synt_E_2	PF08112.6	gi|15921728|ref|NP_377397.1|	-	8.7e-34	115.3	15.5	9.6e-34	115.2	10.7	1.0	1	0	0	1	1	1	1	ATP	synthase	epsilon	subunit
Nucleopor_Nup85	PF07575.8	gi|15921728|ref|NP_377397.1|	-	0.042	12.0	0.3	0.041	12.0	0.2	1.0	1	0	0	1	1	1	0	Nup85	Nucleoporin
Fib_alpha	PF08702.5	gi|15921728|ref|NP_377397.1|	-	0.24	11.5	2.8	0.27	11.3	2.0	1.1	1	0	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
Orthopox_B11R	PF07033.6	gi|15921728|ref|NP_377397.1|	-	1.9	8.0	6.1	1.4	8.4	1.3	2.3	1	1	1	2	2	2	0	Orthopoxvirus	B11R	protein
ATP-synt_C	PF00137.16	gi|15921729|ref|NP_377398.1|	-	3.8e-15	55.5	21.2	5.4e-15	55.0	14.7	1.2	1	0	0	1	1	1	1	ATP	synthase	subunit	C
Nitrate_red_gam	PF02665.9	gi|15921729|ref|NP_377398.1|	-	0.065	12.5	1.1	0.071	12.4	0.7	1.3	1	0	0	1	1	1	0	Nitrate	reductase	gamma	subunit
PspC	PF04024.7	gi|15921729|ref|NP_377398.1|	-	4	6.9	8.8	7.6	6.0	6.1	1.5	1	0	0	1	1	1	0	PspC	domain
tRNA-synt_2b	PF00587.20	gi|15921730|ref|NP_377399.1|	-	1e-26	93.5	0.6	2.4e-26	92.3	0.3	1.7	2	0	0	2	2	2	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|15921730|ref|NP_377399.1|	-	1.3e-21	76.3	0.8	3.7e-21	74.8	0.3	2.0	2	0	0	2	2	2	1	Anticodon	binding	domain
ProRS-C_1	PF09180.6	gi|15921730|ref|NP_377399.1|	-	2.2e-18	65.9	0.0	5.3e-18	64.7	0.0	1.7	1	0	0	1	1	1	1	Prolyl-tRNA	synthetase,	C-terminal
DHC_N1	PF08385.7	gi|15921730|ref|NP_377399.1|	-	0.0078	14.6	1.0	0.041	12.2	0.1	2.0	2	0	0	2	2	2	1	Dynein	heavy	chain,	N-terminal	region	1
tRNA-synt_2	PF00152.15	gi|15921730|ref|NP_377399.1|	-	0.038	12.7	0.9	0.24	10.1	0.2	2.0	1	1	0	1	1	1	0	tRNA	synthetases	class	II	(D,	K	and	N)
Ribosomal_S26e	PF01283.14	gi|161751093|ref|NP_377400.2|	-	4.8e-30	104.1	2.0	5.2e-30	104.0	1.4	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S26e
DZR	PF12773.2	gi|161751093|ref|NP_377400.2|	-	0.038	13.8	4.8	0.29	10.9	3.4	2.0	1	1	1	2	2	2	0	Double	zinc	ribbon
zf-dskA_traR	PF01258.12	gi|161751093|ref|NP_377400.2|	-	0.09	12.5	6.6	0.11	12.2	0.5	2.3	2	0	0	2	2	2	0	Prokaryotic	dksA/traR	C4-type	zinc	finger
Lar_restr_allev	PF14354.1	gi|161751093|ref|NP_377400.2|	-	0.09	13.0	2.7	0.41	10.9	0.2	2.1	1	1	1	2	2	2	0	Restriction	alleviation	protein	Lar
HECT_2	PF09814.4	gi|161751093|ref|NP_377400.2|	-	0.13	10.9	0.6	0.24	10.0	0.4	1.5	1	1	0	1	1	1	0	HECT-like	Ubiquitin-conjugating	enzyme	(E2)-binding
Yippee-Mis18	PF03226.9	gi|161751093|ref|NP_377400.2|	-	0.15	12.0	1.0	3.9	7.5	0.9	2.1	1	1	1	2	2	2	0	Yippee	zinc-binding/DNA-binding	/Mis18,	centromere	assembly
SOR_SNZ	PF01680.12	gi|15921732|ref|NP_377401.1|	-	1.6e-98	328.3	3.9	2.4e-98	327.8	2.7	1.2	1	0	0	1	1	1	1	SOR/SNZ	family
ThiG	PF05690.9	gi|15921732|ref|NP_377401.1|	-	2.4e-06	26.8	4.5	3.3e-05	23.0	0.1	2.5	3	0	0	3	3	3	2	Thiazole	biosynthesis	protein	ThiG
IGPS	PF00218.16	gi|15921732|ref|NP_377401.1|	-	0.00026	20.1	0.0	0.072	12.1	0.0	2.3	2	0	0	2	2	2	2	Indole-3-glycerol	phosphate	synthase
Dus	PF01207.12	gi|15921732|ref|NP_377401.1|	-	0.00053	18.9	0.2	0.17	10.6	0.0	2.6	2	1	0	2	2	2	2	Dihydrouridine	synthase	(Dus)
NMO	PF03060.10	gi|15921732|ref|NP_377401.1|	-	0.002	17.3	3.0	0.0082	15.3	0.0	2.4	2	1	1	3	3	3	1	Nitronate	monooxygenase
OMPdecase	PF00215.19	gi|15921732|ref|NP_377401.1|	-	0.0025	17.2	0.8	2.1	7.7	0.1	2.9	2	1	1	3	3	3	2	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
His_biosynth	PF00977.16	gi|15921732|ref|NP_377401.1|	-	0.0035	16.6	1.2	1.5	8.0	0.0	3.0	2	1	1	3	3	3	2	Histidine	biosynthesis	protein
NanE	PF04131.9	gi|15921732|ref|NP_377401.1|	-	0.018	14.0	0.1	0.39	9.6	0.0	2.3	2	0	0	2	2	2	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
PEP_mutase	PF13714.1	gi|15921732|ref|NP_377401.1|	-	0.049	12.8	0.7	0.18	10.9	0.2	2.1	2	1	0	2	2	2	0	Phosphoenolpyruvate	phosphomutase
SNO	PF01174.14	gi|15921733|ref|NP_377402.1|	-	1.7e-45	154.9	0.1	1.9e-45	154.7	0.0	1.0	1	0	0	1	1	1	1	SNO	glutamine	amidotransferase	family
GATase_3	PF07685.9	gi|15921733|ref|NP_377402.1|	-	2.1e-10	40.3	0.2	4.4e-10	39.3	0.1	1.6	1	1	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
Peptidase_S51	PF03575.12	gi|15921733|ref|NP_377402.1|	-	2.5e-08	33.8	0.0	2.9e-08	33.5	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	S51
GATase	PF00117.23	gi|15921733|ref|NP_377402.1|	-	8.5e-08	31.8	0.2	8.9e-07	28.5	0.1	2.0	1	1	0	1	1	1	1	Glutamine	amidotransferase	class-I
DJ-1_PfpI	PF01965.19	gi|15921733|ref|NP_377402.1|	-	0.0026	17.2	0.0	0.0039	16.6	0.0	1.3	1	0	0	1	1	1	1	DJ-1/PfpI	family
DUF4066	PF13278.1	gi|15921733|ref|NP_377402.1|	-	0.0097	15.1	0.0	0.015	14.5	0.0	1.2	1	0	0	1	1	1	1	Putative	amidotransferase
T2SE	PF00437.15	gi|229310097|ref|NP_377403.2|	-	1.1e-12	47.5	0.0	2.1e-12	46.5	0.0	1.4	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_17	PF13207.1	gi|229310097|ref|NP_377403.2|	-	4.5e-06	27.4	0.4	0.00022	22.0	0.0	3.4	3	1	0	4	4	3	1	AAA	domain
AAA_18	PF13238.1	gi|229310097|ref|NP_377403.2|	-	0.00046	20.4	1.0	0.0026	18.0	0.0	2.9	4	1	0	4	4	2	1	AAA	domain
RuvB_N	PF05496.7	gi|229310097|ref|NP_377403.2|	-	0.0011	18.0	0.6	0.0082	15.2	0.0	2.5	3	0	0	3	3	3	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_22	PF13401.1	gi|229310097|ref|NP_377403.2|	-	0.0016	18.5	0.4	0.025	14.7	0.0	2.8	3	1	0	3	3	2	1	AAA	domain
AAA_16	PF13191.1	gi|229310097|ref|NP_377403.2|	-	0.0042	17.0	0.0	0.021	14.8	0.0	2.1	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA	PF00004.24	gi|229310097|ref|NP_377403.2|	-	0.0044	17.2	0.1	0.017	15.3	0.0	2.1	2	0	0	2	2	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_5	PF07728.9	gi|229310097|ref|NP_377403.2|	-	0.011	15.4	0.1	0.028	14.1	0.0	1.7	2	0	0	2	2	1	0	AAA	domain	(dynein-related	subfamily)
AAA_14	PF13173.1	gi|229310097|ref|NP_377403.2|	-	0.012	15.5	0.1	1.4	8.8	0.0	3.3	3	1	1	4	4	3	0	AAA	domain
AAA_19	PF13245.1	gi|229310097|ref|NP_377403.2|	-	0.013	15.2	0.0	0.034	13.8	0.0	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
Sigma54_activ_2	PF14532.1	gi|229310097|ref|NP_377403.2|	-	0.013	15.5	0.0	0.03	14.3	0.0	1.6	1	0	0	1	1	1	0	Sigma-54	interaction	domain
FtsK_SpoIIIE	PF01580.13	gi|229310097|ref|NP_377403.2|	-	0.014	14.8	0.0	0.026	14.0	0.0	1.4	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
IstB_IS21	PF01695.12	gi|229310097|ref|NP_377403.2|	-	0.014	14.8	0.0	0.025	14.0	0.0	1.3	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
Zeta_toxin	PF06414.7	gi|229310097|ref|NP_377403.2|	-	0.017	14.2	0.0	0.048	12.7	0.0	1.7	2	0	0	2	2	2	0	Zeta	toxin
NTPase_1	PF03266.10	gi|229310097|ref|NP_377403.2|	-	0.017	14.8	0.2	0.18	11.4	0.0	2.7	2	0	0	2	2	2	0	NTPase
AAA_33	PF13671.1	gi|229310097|ref|NP_377403.2|	-	0.019	14.8	0.0	0.071	12.9	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
HTH_19	PF12844.2	gi|229310097|ref|NP_377403.2|	-	0.019	15.0	0.3	0.15	12.1	0.0	2.5	3	0	0	3	3	2	0	Helix-turn-helix	domain
NACHT	PF05729.7	gi|229310097|ref|NP_377403.2|	-	0.028	14.0	0.0	0.058	13.0	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
DnaB_C	PF03796.10	gi|229310097|ref|NP_377403.2|	-	0.029	13.2	0.0	0.1	11.4	0.0	1.8	2	0	0	2	2	2	0	DnaB-like	helicase	C	terminal	domain
ArgK	PF03308.11	gi|229310097|ref|NP_377403.2|	-	0.031	13.0	0.0	0.056	12.2	0.0	1.4	1	0	0	1	1	1	0	ArgK	protein
AAA_25	PF13481.1	gi|229310097|ref|NP_377403.2|	-	0.033	13.5	0.0	0.1	11.9	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
AAA_28	PF13521.1	gi|229310097|ref|NP_377403.2|	-	0.033	14.1	0.0	0.067	13.1	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
ABC_tran	PF00005.22	gi|229310097|ref|NP_377403.2|	-	0.042	14.1	0.0	0.092	13.0	0.0	1.6	1	0	0	1	1	1	0	ABC	transporter
SRP54	PF00448.17	gi|229310097|ref|NP_377403.2|	-	0.046	13.1	0.0	0.086	12.2	0.0	1.4	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA_3	PF07726.6	gi|229310097|ref|NP_377403.2|	-	0.067	12.8	0.0	0.43	10.1	0.0	2.2	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ATP_bind_1	PF03029.12	gi|229310097|ref|NP_377403.2|	-	0.07	12.6	0.1	0.14	11.6	0.0	1.5	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
Sigma54_activat	PF00158.21	gi|229310097|ref|NP_377403.2|	-	0.085	12.3	0.0	0.19	11.1	0.0	1.5	1	0	0	1	1	1	0	Sigma-54	interaction	domain
UPF0079	PF02367.12	gi|229310097|ref|NP_377403.2|	-	0.086	12.4	0.0	0.21	11.2	0.0	1.6	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
SRI	PF08236.6	gi|229310097|ref|NP_377403.2|	-	0.13	12.2	1.7	0.54	10.2	0.5	2.5	2	0	0	2	2	2	0	SRI	(Set2	Rpb1	interacting)	domain
AAA_30	PF13604.1	gi|229310097|ref|NP_377403.2|	-	0.18	11.3	0.0	0.32	10.5	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Hjc	PF01870.13	gi|15921735|ref|NP_377404.1|	-	2.4e-26	91.1	0.3	3.2e-26	90.7	0.2	1.2	1	0	0	1	1	1	1	Archaeal	holliday	junction	resolvase	(hjc)
NERD	PF08378.6	gi|15921735|ref|NP_377404.1|	-	0.011	16.0	0.0	0.014	15.6	0.0	1.3	1	0	0	1	1	1	0	Nuclease-related	domain
DUF3883	PF13020.1	gi|15921735|ref|NP_377404.1|	-	0.03	14.0	0.2	0.099	12.3	0.0	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3883)
VRR_NUC	PF08774.6	gi|15921735|ref|NP_377404.1|	-	0.057	13.4	0.0	0.097	12.6	0.0	1.4	1	0	0	1	1	1	0	VRR-NUC	domain
DUF3221	PF11518.3	gi|15921735|ref|NP_377404.1|	-	0.1	12.2	0.0	0.85	9.3	0.0	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3221)
IlvN	PF07991.7	gi|15921736|ref|NP_377405.1|	-	1.1e-72	242.8	0.0	1.8e-72	242.0	0.0	1.4	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
IlvC	PF01450.14	gi|15921736|ref|NP_377405.1|	-	4.9e-45	153.0	1.7	6.9e-45	152.5	1.2	1.2	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
F420_oxidored	PF03807.12	gi|15921736|ref|NP_377405.1|	-	2.1e-07	31.2	0.0	5.3e-07	29.9	0.0	1.7	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
2-Hacid_dh_C	PF02826.14	gi|15921736|ref|NP_377405.1|	-	3.7e-06	26.2	0.0	7.8e-06	25.1	0.0	1.5	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_2	PF03446.10	gi|15921736|ref|NP_377405.1|	-	3.8e-05	23.5	0.0	7.4e-05	22.6	0.0	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
AdoHcyase_NAD	PF00670.16	gi|15921736|ref|NP_377405.1|	-	0.00079	19.3	0.0	0.0019	18.0	0.0	1.6	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
NAD_Gly3P_dh_N	PF01210.18	gi|15921736|ref|NP_377405.1|	-	0.0027	17.4	0.2	2.1	8.0	0.0	2.6	1	1	1	2	2	2	2	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
ApbA	PF02558.11	gi|15921736|ref|NP_377405.1|	-	0.012	15.0	0.0	0.033	13.6	0.0	1.8	1	1	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
NAD_binding_10	PF13460.1	gi|15921736|ref|NP_377405.1|	-	0.016	15.2	0.0	0.032	14.2	0.0	1.5	1	0	0	1	1	1	0	NADH(P)-binding
ACT_5	PF13710.1	gi|15921737|ref|NP_377406.1|	-	4e-05	23.3	0.0	5.9e-05	22.7	0.0	1.3	1	0	0	1	1	1	1	ACT	domain
TPP_enzyme_N	PF02776.13	gi|15921738|ref|NP_377407.1|	-	4.9e-59	198.6	0.0	1.8e-57	193.5	0.0	2.3	2	1	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|15921738|ref|NP_377407.1|	-	3.6e-47	159.7	0.1	3.9e-46	156.4	0.0	2.5	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.17	gi|15921738|ref|NP_377407.1|	-	2e-37	127.9	0.0	7.8e-37	126.0	0.0	2.0	3	0	0	3	3	3	1	Thiamine	pyrophosphate	enzyme,	central	domain
POR_N	PF01855.14	gi|15921738|ref|NP_377407.1|	-	0.00049	19.6	0.0	0.00099	18.6	0.0	1.6	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
CO_dh	PF02552.11	gi|15921738|ref|NP_377407.1|	-	0.073	12.6	0.2	0.25	10.9	0.0	1.9	1	1	1	2	2	2	0	CO	dehydrogenase	beta	subunit/acetyl-CoA	synthase	epsilon	subunit
Acid_PPase	PF12689.2	gi|15921739|ref|NP_377408.1|	-	4.2e-11	42.7	0.0	6.1e-11	42.2	0.0	1.4	1	1	0	1	1	1	1	Acid	Phosphatase
Hydrolase	PF00702.21	gi|15921739|ref|NP_377408.1|	-	0.00021	21.7	0.0	0.027	14.8	0.0	2.1	2	0	0	2	2	2	2	haloacid	dehalogenase-like	hydrolase
HAD_2	PF13419.1	gi|15921739|ref|NP_377408.1|	-	0.0014	18.8	0.3	0.0074	16.5	0.1	2.1	1	1	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
NIF	PF03031.13	gi|15921739|ref|NP_377408.1|	-	0.012	15.2	0.4	0.016	14.8	0.3	1.3	1	1	0	1	1	1	0	NLI	interacting	factor-like	phosphatase
DUF3368	PF11848.3	gi|15921739|ref|NP_377408.1|	-	0.017	14.6	0.1	0.086	12.4	0.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3368)
MMR_HSR1	PF01926.18	gi|15921740|ref|NP_377409.1|	-	1.3e-15	57.3	0.7	8.5e-12	45.0	0.0	2.2	2	0	0	2	2	2	2	50S	ribosome-binding	GTPase
DUF258	PF03193.11	gi|15921740|ref|NP_377409.1|	-	3.8e-07	29.4	0.0	5.4e-07	28.9	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
FeoB_N	PF02421.13	gi|15921740|ref|NP_377409.1|	-	1.1e-06	27.9	0.3	0.025	13.8	0.0	2.2	2	0	0	2	2	2	2	Ferrous	iron	transport	protein	B
Dynamin_N	PF00350.18	gi|15921740|ref|NP_377409.1|	-	1.5e-05	24.8	1.3	0.025	14.4	0.1	2.4	2	1	0	2	2	2	2	Dynamin	family
GTP_EFTU	PF00009.22	gi|15921740|ref|NP_377409.1|	-	0.0001	21.7	0.2	0.0014	18.0	0.0	2.1	1	1	1	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
Arf	PF00025.16	gi|15921740|ref|NP_377409.1|	-	0.0031	16.7	0.4	0.12	11.6	0.0	2.2	2	0	0	2	2	2	1	ADP-ribosylation	factor	family
AAA_17	PF13207.1	gi|15921740|ref|NP_377409.1|	-	0.012	16.4	0.2	0.14	12.9	0.0	2.5	2	1	0	2	2	2	0	AAA	domain
Miro	PF08477.8	gi|15921740|ref|NP_377409.1|	-	0.033	14.6	0.1	0.14	12.6	0.0	2.0	2	0	0	2	2	2	0	Miro-like	protein
cobW	PF02492.14	gi|15921740|ref|NP_377409.1|	-	0.042	13.3	0.2	0.25	10.7	0.0	2.0	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
PduV-EutP	PF10662.4	gi|15921740|ref|NP_377409.1|	-	0.044	13.2	0.4	5.2	6.5	0.0	2.5	3	0	0	3	3	3	0	Ethanolamine	utilisation	-	propanediol	utilisation
SDP_N	PF12278.3	gi|15921740|ref|NP_377409.1|	-	0.045	13.3	0.2	0.091	12.3	0.1	1.5	1	0	0	1	1	1	0	Sex	determination	protein	N	terminal
Beta-Casp	PF10996.3	gi|15921740|ref|NP_377409.1|	-	0.077	12.9	0.0	0.14	12.1	0.0	1.4	1	0	0	1	1	1	0	Beta-Casp	domain
6PF2K	PF01591.13	gi|15921740|ref|NP_377409.1|	-	0.32	10.0	2.5	8.1	5.4	0.0	3.2	2	1	2	4	4	4	0	6-phosphofructo-2-kinase
UbiA	PF01040.13	gi|15921742|ref|NP_377411.1|	-	1.7e-39	135.5	23.4	2.1e-39	135.3	16.2	1.1	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
Peptidase_M50	PF02163.17	gi|15921742|ref|NP_377411.1|	-	0.053	12.4	1.0	0.18	10.7	0.6	1.9	1	1	0	1	1	1	0	Peptidase	family	M50
CbtB	PF09489.5	gi|15921742|ref|NP_377411.1|	-	0.37	10.7	2.5	4.2	7.3	0.0	3.0	2	0	0	2	2	2	0	Probable	cobalt	transporter	subunit	(CbtB)
AdoMet_dc	PF02675.10	gi|15921745|ref|NP_377414.1|	-	5.6e-34	116.2	0.1	6.4e-34	116.0	0.1	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	decarboxylase
AIG2_2	PF13772.1	gi|15921745|ref|NP_377414.1|	-	0.11	12.6	0.4	1.4	9.1	0.0	2.1	2	0	0	2	2	2	0	AIG2-like	family
DUF211	PF02680.9	gi|15921746|ref|NP_377415.1|	-	7.7e-37	124.9	2.6	8.1e-37	124.9	1.8	1.0	1	0	0	1	1	1	1	Uncharacterized	ArCR,	COG1888
ATP_bind_3	PF01171.15	gi|15921747|ref|NP_377416.1|	-	2.1e-10	40.4	0.0	3.4e-10	39.7	0.0	1.5	1	0	0	1	1	1	1	PP-loop	family
tRNA_Me_trans	PF03054.11	gi|15921747|ref|NP_377416.1|	-	0.0008	18.0	0.0	0.0011	17.6	0.0	1.1	1	0	0	1	1	1	1	tRNA	methyl	transferase
NAD_synthase	PF02540.12	gi|15921747|ref|NP_377416.1|	-	0.0011	17.9	0.1	0.0014	17.5	0.0	1.2	1	0	0	1	1	1	1	NAD	synthase
Ribosomal_S14	PF00253.16	gi|15921747|ref|NP_377416.1|	-	0.8	9.1	7.6	3	7.2	0.6	2.8	2	1	0	2	2	2	0	Ribosomal	protein	S14p/S29e
DZR	PF12773.2	gi|15921747|ref|NP_377416.1|	-	4.1	7.2	11.0	0.24	11.2	0.7	2.7	3	0	0	3	3	3	0	Double	zinc	ribbon
Cob_adeno_trans	PF01923.13	gi|15921748|ref|NP_377417.1|	-	5.5e-50	169.3	0.0	6.3e-50	169.1	0.0	1.0	1	0	0	1	1	1	1	Cobalamin	adenosyltransferase
tRNA-synt_1	PF00133.17	gi|15921749|ref|NP_377418.1|	-	4.7e-55	186.7	0.0	2.6e-54	184.2	0.0	2.1	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|15921749|ref|NP_377418.1|	-	1.3e-20	73.6	0.8	3.1e-20	72.5	0.6	1.7	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.6	gi|15921749|ref|NP_377418.1|	-	1e-18	67.2	3.2	9.5e-12	44.2	0.0	4.1	3	1	0	4	4	4	2	tRNA	synthetases	class	I	(M)
tRNA-synt_1_2	PF13603.1	gi|15921749|ref|NP_377418.1|	-	4.1e-13	49.0	0.2	9.3e-13	47.8	0.1	1.6	1	0	0	1	1	1	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1e	PF01406.14	gi|15921749|ref|NP_377418.1|	-	5.7e-11	42.0	0.0	2.8e-09	36.5	0.0	2.4	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1f	PF01921.13	gi|15921749|ref|NP_377418.1|	-	0.0082	14.8	0.0	0.024	13.3	0.0	1.8	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(K)
YmgB	PF10798.3	gi|15921750|ref|NP_377419.1|	-	0.056	13.2	0.6	0.11	12.3	0.4	1.4	1	0	0	1	1	1	0	Biofilm	development	protein	YmgB/AriR
Aminotran_1_2	PF00155.16	gi|15921751|ref|NP_377420.1|	-	1.7e-42	145.7	0.0	1.8e-42	145.5	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Cys_Met_Meta_PP	PF01053.15	gi|15921751|ref|NP_377420.1|	-	0.045	12.0	0.0	0.071	11.3	0.0	1.3	1	0	0	1	1	1	0	Cys/Met	metabolism	PLP-dependent	enzyme
Zot	PF05707.7	gi|15921751|ref|NP_377420.1|	-	0.063	12.7	0.0	0.13	11.7	0.0	1.5	2	0	0	2	2	2	0	Zonular	occludens	toxin	(Zot)
HisG	PF01634.13	gi|15921752|ref|NP_377421.1|	-	1.3e-54	184.1	0.8	1.7e-54	183.7	0.5	1.2	1	0	0	1	1	1	1	ATP	phosphoribosyltransferase
HisG_C	PF08029.6	gi|15921752|ref|NP_377421.1|	-	1.1e-24	86.1	1.0	3e-24	84.7	0.7	1.8	1	0	0	1	1	1	1	HisG,	C-terminal	domain
NIR_SIR_ferr	PF03460.12	gi|15921752|ref|NP_377421.1|	-	0.098	12.3	0.1	24	4.6	0.0	3.1	3	0	0	3	3	3	0	Nitrite/Sulfite	reductase	ferredoxin-like	half	domain
F420_oxidored	PF03807.12	gi|15921752|ref|NP_377421.1|	-	0.31	11.4	3.8	0.54	10.7	0.0	3.0	3	2	1	4	4	4	0	NADP	oxidoreductase	coenzyme	F420-dependent
His_biosynth	PF00977.16	gi|15921753|ref|NP_377422.1|	-	1.4e-49	168.4	0.5	1.5e-49	168.2	0.3	1.0	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
PcrB	PF01884.12	gi|15921753|ref|NP_377422.1|	-	8.7e-06	25.1	2.3	0.0094	15.2	0.1	2.3	2	0	0	2	2	2	2	PcrB	family
IGPD	PF00475.13	gi|15921754|ref|NP_377423.1|	-	5.8e-51	172.1	0.4	7.5e-51	171.8	0.3	1.1	1	0	0	1	1	1	1	Imidazoleglycerol-phosphate	dehydratase
His_biosynth	PF00977.16	gi|15921755|ref|NP_377424.1|	-	3.2e-84	281.7	6.9	3.6e-84	281.5	4.8	1.0	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
Dus	PF01207.12	gi|15921755|ref|NP_377424.1|	-	2e-06	26.8	0.4	0.017	13.9	0.0	2.2	1	1	1	2	2	2	2	Dihydrouridine	synthase	(Dus)
NMO	PF03060.10	gi|15921755|ref|NP_377424.1|	-	4.9e-06	25.9	2.4	0.0036	16.4	0.2	2.1	1	1	1	2	2	2	2	Nitronate	monooxygenase
TMP-TENI	PF02581.12	gi|15921755|ref|NP_377424.1|	-	6.8e-06	25.3	0.3	0.096	11.7	0.0	2.2	2	0	0	2	2	2	2	Thiamine	monophosphate	synthase/TENI
PcrB	PF01884.12	gi|15921755|ref|NP_377424.1|	-	2.6e-05	23.5	5.3	7.6e-05	22.0	0.6	2.7	2	2	1	3	3	3	1	PcrB	family
ThiG	PF05690.9	gi|15921755|ref|NP_377424.1|	-	0.00016	20.8	1.1	0.0063	15.6	0.2	2.2	1	1	1	2	2	2	1	Thiazole	biosynthesis	protein	ThiG
FMN_dh	PF01070.13	gi|15921755|ref|NP_377424.1|	-	0.0084	14.9	1.8	0.044	12.6	0.1	2.5	2	1	1	3	3	3	1	FMN-dependent	dehydrogenase
G3P_antiterm	PF04309.7	gi|15921755|ref|NP_377424.1|	-	0.0099	14.9	1.0	0.4	9.6	0.2	2.2	2	0	0	2	2	2	1	Glycerol-3-phosphate	responsive	antiterminator
DHO_dh	PF01180.16	gi|15921755|ref|NP_377424.1|	-	0.013	14.5	1.0	0.29	10.0	0.1	2.3	2	1	0	2	2	2	0	Dihydroorotate	dehydrogenase
DUF2625	PF10946.3	gi|15921755|ref|NP_377424.1|	-	0.014	14.2	0.2	0.043	12.7	0.1	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	DUF2625
Trp_syntA	PF00290.15	gi|15921755|ref|NP_377424.1|	-	0.061	11.8	2.9	0.092	11.2	0.5	2.0	2	0	0	2	2	2	0	Tryptophan	synthase	alpha	chain
PEP_mutase	PF13714.1	gi|15921755|ref|NP_377424.1|	-	0.13	11.4	2.6	8.5	5.5	0.3	2.5	1	1	2	3	3	3	0	Phosphoenolpyruvate	phosphomutase
Histidinol_dh	PF00815.15	gi|15921756|ref|NP_377425.1|	-	8.9e-115	383.6	2.8	4.1e-114	381.4	2.0	1.8	1	1	0	1	1	1	1	Histidinol	dehydrogenase
PRA-PH	PF01503.12	gi|15921757|ref|NP_377426.1|	-	1.1e-12	47.9	0.0	1.4e-12	47.6	0.0	1.1	1	0	0	1	1	1	1	Phosphoribosyl-ATP	pyrophosphohydrolase
MazG	PF03819.12	gi|15921757|ref|NP_377426.1|	-	0.0079	16.1	0.1	0.011	15.6	0.1	1.2	1	0	0	1	1	1	1	MazG	nucleotide	pyrophosphohydrolase	domain
TcdA_TcdB_pore	PF12920.2	gi|15921757|ref|NP_377426.1|	-	0.067	11.0	0.0	0.068	11.0	0.0	1.0	1	0	0	1	1	1	0	TcdA/TcdB	pore	forming	domain
DUF758	PF05527.6	gi|15921757|ref|NP_377426.1|	-	0.12	11.9	0.0	0.19	11.3	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF758)
GATase	PF00117.23	gi|15921758|ref|NP_377427.1|	-	5.6e-27	94.4	0.0	6.5e-27	94.2	0.0	1.1	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
GATase_3	PF07685.9	gi|15921758|ref|NP_377427.1|	-	0.00039	20.0	0.0	0.00059	19.4	0.0	1.2	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
GATase_5	PF13507.1	gi|15921758|ref|NP_377427.1|	-	0.026	13.4	0.0	0.037	12.9	0.0	1.2	1	0	0	1	1	1	0	CobB/CobQ-like	glutamine	amidotransferase	domain
Peptidase_C26	PF07722.8	gi|15921758|ref|NP_377427.1|	-	0.095	12.1	0.0	8.4	5.7	0.0	2.1	2	0	0	2	2	2	0	Peptidase	C26
PRA-CH	PF01502.13	gi|15921759|ref|NP_377428.1|	-	4.1e-34	116.0	0.1	6.4e-34	115.4	0.1	1.3	1	0	0	1	1	1	1	Phosphoribosyl-AMP	cyclohydrolase
DUF59	PF01883.14	gi|15921760|ref|NP_377429.1|	-	8.2e-19	67.3	0.1	2.2e-18	65.9	0.1	1.7	1	1	1	2	2	2	1	Domain	of	unknown	function	DUF59
YqhG	PF11079.3	gi|15921760|ref|NP_377429.1|	-	0.085	11.6	0.1	0.16	10.7	0.0	1.4	1	0	0	1	1	1	0	Bacterial	protein	YqhG	of	unknown	function
tRNA-synt_2b	PF00587.20	gi|15921761|ref|NP_377430.1|	-	2.7e-38	131.2	0.0	7.8e-38	129.7	0.0	1.8	2	0	0	2	2	2	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
Seryl_tRNA_N	PF02403.17	gi|15921761|ref|NP_377430.1|	-	3.9e-24	84.7	11.1	7.2e-24	83.8	7.7	1.4	1	0	0	1	1	1	1	Seryl-tRNA	synthetase	N-terminal	domain
ALIX_LYPXL_bnd	PF13949.1	gi|15921761|ref|NP_377430.1|	-	0.0017	17.3	5.3	0.0028	16.6	3.6	1.3	1	0	0	1	1	1	1	ALIX	V-shaped	domain	binding	to	HIV
DUF4071	PF13281.1	gi|15921761|ref|NP_377430.1|	-	0.027	13.3	3.1	0.039	12.8	2.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4071)
APG6	PF04111.7	gi|15921761|ref|NP_377430.1|	-	0.029	13.4	1.2	0.047	12.7	0.8	1.3	1	0	0	1	1	1	0	Autophagy	protein	Apg6
Cep57_MT_bd	PF06657.8	gi|15921761|ref|NP_377430.1|	-	0.092	12.7	4.5	0.19	11.7	3.1	1.5	1	0	0	1	1	1	0	Centrosome	microtubule-binding	domain	of	Cep57
DUF2205	PF10224.4	gi|15921761|ref|NP_377430.1|	-	0.13	11.8	6.9	0.13	11.8	3.3	2.2	1	1	0	1	1	1	0	Predicted	coiled-coil	protein	(DUF2205)
HAP1_N	PF04849.8	gi|15921761|ref|NP_377430.1|	-	0.29	10.0	7.8	0.16	10.8	4.1	1.5	2	0	0	2	2	2	0	HAP1	N-terminal	conserved	region
DUF342	PF03961.8	gi|15921761|ref|NP_377430.1|	-	0.52	8.6	4.5	1	7.6	3.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
Radical_SAM	PF04055.16	gi|15921762|ref|NP_377431.1|	-	2.6e-16	60.2	0.1	7.2e-16	58.8	0.0	1.8	1	0	0	1	1	1	1	Radical	SAM	superfamily
B12-binding	PF02310.14	gi|15921762|ref|NP_377431.1|	-	0.0013	18.6	0.0	0.031	14.1	0.0	2.2	2	0	0	2	2	2	1	B12	binding	domain
HIT	PF01230.18	gi|15921763|ref|NP_377432.1|	-	4.1e-31	107.3	1.0	5.6e-31	106.9	0.7	1.2	1	0	0	1	1	1	1	HIT	domain
DcpS_C	PF11969.3	gi|15921763|ref|NP_377432.1|	-	1.4e-20	73.6	0.7	1.8e-20	73.3	0.5	1.2	1	0	0	1	1	1	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
CwfJ_C_1	PF04677.10	gi|15921763|ref|NP_377432.1|	-	0.00027	20.5	1.8	0.0004	20.0	1.1	1.5	1	1	0	1	1	1	1	Protein	similar	to	CwfJ	C-terminus	1
UPF0183	PF03676.9	gi|15921763|ref|NP_377432.1|	-	0.046	12.2	0.2	0.05	12.1	0.1	1.1	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0183)
RNA_POL_M_15KD	PF02150.11	gi|15921764|ref|NP_377433.1|	-	7e-10	38.4	0.8	1.3e-09	37.6	0.5	1.5	1	0	0	1	1	1	1	RNA	polymerases	M/15	Kd	subunit
DUF2387	PF09526.5	gi|15921764|ref|NP_377433.1|	-	4e-05	23.4	3.0	7.6e-05	22.5	2.1	1.7	1	1	0	1	1	1	1	Probable	metal-binding	protein	(DUF2387)
zf-TFIIB	PF13453.1	gi|15921764|ref|NP_377433.1|	-	7.8e-05	21.7	1.1	0.00014	20.9	0.8	1.5	1	0	0	1	1	1	1	Transcription	factor	zinc-finger
zf-NADH-PPase	PF09297.6	gi|15921764|ref|NP_377433.1|	-	0.00036	19.9	2.2	0.0034	16.8	1.7	2.1	1	1	1	2	2	2	1	NADH	pyrophosphatase	zinc	ribbon	domain
zinc_ribbon_2	PF13240.1	gi|15921764|ref|NP_377433.1|	-	0.00042	19.7	4.4	0.28	10.7	0.0	2.6	2	0	0	2	2	2	2	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|15921764|ref|NP_377433.1|	-	0.00097	18.2	0.9	0.14	11.3	0.2	2.3	2	0	0	2	2	2	1	zinc-ribbon	domain
DZR	PF12773.2	gi|15921764|ref|NP_377433.1|	-	0.0012	18.5	0.6	0.0021	17.8	0.4	1.4	1	0	0	1	1	1	1	Double	zinc	ribbon
IBR	PF01485.16	gi|15921764|ref|NP_377433.1|	-	0.0025	17.6	1.2	0.005	16.6	0.8	1.5	1	0	0	1	1	1	1	IBR	domain
OrfB_Zn_ribbon	PF07282.6	gi|15921764|ref|NP_377433.1|	-	0.0062	16.1	1.0	0.0062	16.1	0.7	1.6	2	0	0	2	2	1	1	Putative	transposase	DNA-binding	domain
Zn_ribbon_recom	PF13408.1	gi|15921764|ref|NP_377433.1|	-	0.0077	16.4	6.7	0.65	10.2	1.1	2.3	1	1	1	2	2	2	2	Recombinase	zinc	beta	ribbon	domain
zf-ISL3	PF14690.1	gi|15921764|ref|NP_377433.1|	-	0.0087	16.0	3.6	1.6	8.8	0.3	2.3	1	1	1	2	2	2	2	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
A2L_zn_ribbon	PF08792.5	gi|15921764|ref|NP_377433.1|	-	0.014	14.8	2.8	0.58	9.6	0.1	2.4	1	1	1	2	2	2	0	A2L	zinc	ribbon	domain
Nudix_N_2	PF14803.1	gi|15921764|ref|NP_377433.1|	-	0.017	14.7	3.5	0.094	12.4	2.7	2.0	1	1	1	2	2	2	0	Nudix	N-terminal
Zn-ribbon_8	PF09723.5	gi|15921764|ref|NP_377433.1|	-	0.046	13.6	2.0	2.9	7.9	0.1	2.3	2	0	0	2	2	2	0	Zinc	ribbon	domain
Cys_rich_CPCC	PF14206.1	gi|15921764|ref|NP_377433.1|	-	0.054	13.0	0.2	0.096	12.2	0.1	1.5	1	0	0	1	1	1	0	Cysteine-rich	CPCC
Zn_Tnp_IS1595	PF12760.2	gi|15921764|ref|NP_377433.1|	-	0.068	12.9	1.0	0.13	12.0	0.7	1.5	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
Ogr_Delta	PF04606.7	gi|15921764|ref|NP_377433.1|	-	0.075	12.7	0.7	5.7	6.6	0.0	2.4	2	0	0	2	2	2	0	Ogr/Delta-like	zinc	finger
UPF0547	PF10571.4	gi|15921764|ref|NP_377433.1|	-	0.079	12.6	2.9	3.2	7.5	0.4	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
Rubredoxin	PF00301.15	gi|15921764|ref|NP_377433.1|	-	0.08	12.8	1.4	2.7	7.9	0.1	2.4	2	0	0	2	2	2	0	Rubredoxin
zf-C3HC	PF07967.8	gi|15921764|ref|NP_377433.1|	-	0.084	12.6	1.4	0.1	12.3	1.0	1.4	1	1	0	1	1	1	0	C3HC	zinc	finger-like
zf-C4_Topoisom	PF01396.14	gi|15921764|ref|NP_377433.1|	-	0.1	12.0	2.9	1.1	8.8	0.3	2.3	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
Elf1	PF05129.8	gi|15921764|ref|NP_377433.1|	-	0.11	12.1	1.1	0.17	11.5	0.3	1.7	1	1	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
YhfH	PF14149.1	gi|15921764|ref|NP_377433.1|	-	0.12	12.1	4.5	4.5	7.1	0.1	2.7	2	0	0	2	2	2	0	YhfH-like	protein
C1_1	PF00130.17	gi|15921764|ref|NP_377433.1|	-	0.19	11.4	1.1	0.28	10.9	0.8	1.2	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
Ribosomal_L33	PF00471.15	gi|15921764|ref|NP_377433.1|	-	0.24	11.6	4.3	5.1	7.4	0.1	2.6	2	1	0	2	2	2	0	Ribosomal	protein	L33
Lar_restr_allev	PF14354.1	gi|15921764|ref|NP_377433.1|	-	0.43	10.9	3.2	0.24	11.7	0.7	1.8	2	1	0	2	2	1	0	Restriction	alleviation	protein	Lar
DUF1936	PF09151.5	gi|15921764|ref|NP_377433.1|	-	0.51	9.8	6.5	0.78	9.2	3.5	2.0	2	1	0	2	2	1	0	Domain	of	unknown	function	(DUF1936)
Auto_anti-p27	PF06677.7	gi|15921764|ref|NP_377433.1|	-	0.6	9.9	5.3	3.9	7.3	3.8	2.0	1	1	1	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
TF_Zn_Ribbon	PF08271.7	gi|15921764|ref|NP_377433.1|	-	0.61	9.4	7.2	0.13	11.5	2.2	2.1	2	1	0	2	2	1	0	TFIIB	zinc-binding
DNA_RNApol_7kD	PF03604.8	gi|15921764|ref|NP_377433.1|	-	0.68	9.4	3.7	2.8	7.4	2.6	2.0	1	1	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zinc_ribbon_5	PF13719.1	gi|15921764|ref|NP_377433.1|	-	0.69	9.5	4.4	4.6	6.8	1.7	2.7	2	1	0	2	2	1	0	zinc-ribbon	domain
FYDLN_acid	PF09538.5	gi|15921764|ref|NP_377433.1|	-	0.73	10.4	9.5	3.8	8.1	6.6	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(FYDLN_acid)
zf-tcix	PF14952.1	gi|15921764|ref|NP_377433.1|	-	2.2	7.6	5.5	10	5.5	0.6	2.3	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
DUF2072	PF09845.4	gi|15921764|ref|NP_377433.1|	-	3.8	7.4	9.8	11	5.9	6.8	1.8	1	1	0	1	1	1	0	Zn-ribbon	containing	protein	(DUF2072)
DUF1610	PF07754.6	gi|15921764|ref|NP_377433.1|	-	5.2	7.2	6.3	10	6.3	0.6	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
Spore_YhaL	PF14147.1	gi|15921764|ref|NP_377433.1|	-	7.7	6.0	7.9	9.2	5.8	4.7	1.8	1	1	0	1	1	1	0	Sporulation	protein	YhaL
zf-IS66	PF13005.2	gi|15921764|ref|NP_377433.1|	-	9.5	6.2	8.6	1.2	9.1	0.2	2.7	2	2	1	3	3	3	0	zinc-finger	binding	domain	of	transposase	IS66
AsnC_trans_reg	PF01037.16	gi|15921765|ref|NP_377434.1|	-	6e-18	64.3	0.3	9.4e-18	63.6	0.2	1.3	1	0	0	1	1	1	1	AsnC	family
HTH_24	PF13412.1	gi|15921765|ref|NP_377434.1|	-	3.4e-12	45.5	0.1	3.6e-11	42.2	0.2	2.3	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|15921765|ref|NP_377434.1|	-	6.4e-10	38.4	2.1	1.1e-09	37.6	1.2	1.6	2	0	0	2	2	1	1	AsnC-type	helix-turn-helix	domain
HTH_11	PF08279.7	gi|15921765|ref|NP_377434.1|	-	3.2e-05	23.5	0.1	5.7e-05	22.6	0.1	1.4	1	0	0	1	1	1	1	HTH	domain
HTH_23	PF13384.1	gi|15921765|ref|NP_377434.1|	-	0.0002	20.8	0.0	0.00044	19.8	0.0	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
MarR_2	PF12802.2	gi|15921765|ref|NP_377434.1|	-	0.0003	20.4	0.2	0.00062	19.3	0.1	1.5	1	0	0	1	1	1	1	MarR	family
Fe_dep_repress	PF01325.14	gi|15921765|ref|NP_377434.1|	-	0.001	18.9	0.1	0.0025	17.7	0.1	1.6	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_10	PF04967.7	gi|15921765|ref|NP_377434.1|	-	0.0015	18.0	0.0	0.0029	17.1	0.0	1.5	1	0	0	1	1	1	1	HTH	DNA	binding	domain
TrmB	PF01978.14	gi|15921765|ref|NP_377434.1|	-	0.0027	17.3	0.3	0.0074	15.9	0.1	1.8	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_Tnp_ISL3	PF13542.1	gi|15921765|ref|NP_377434.1|	-	0.004	16.2	0.0	0.0065	15.6	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_DeoR	PF08220.7	gi|15921765|ref|NP_377434.1|	-	0.0044	16.5	0.2	0.014	14.8	0.0	1.9	2	0	0	2	2	2	1	DeoR-like	helix-turn-helix	domain
HTH_28	PF13518.1	gi|15921765|ref|NP_377434.1|	-	0.0048	16.8	0.0	0.0082	16.1	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
GntR	PF00392.16	gi|15921765|ref|NP_377434.1|	-	0.0072	15.7	0.4	0.012	14.9	0.3	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
TetR_C_9	PF14514.1	gi|15921765|ref|NP_377434.1|	-	0.0074	16.0	0.0	0.012	15.4	0.0	1.4	1	0	0	1	1	1	1	Transcriptional	regulator,	TetR,	C-terminal
HTH_IclR	PF09339.5	gi|15921765|ref|NP_377434.1|	-	0.0084	15.6	0.6	0.013	15.0	0.4	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
Rrf2	PF02082.15	gi|15921765|ref|NP_377434.1|	-	0.0091	16.1	0.0	0.02	15.0	0.0	1.5	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_8	PF02954.14	gi|15921765|ref|NP_377434.1|	-	0.011	15.2	0.2	0.021	14.3	0.1	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	Fis	family
MarR	PF01047.17	gi|15921765|ref|NP_377434.1|	-	0.036	13.7	0.1	0.086	12.5	0.1	1.6	1	0	0	1	1	1	0	MarR	family
HTH_30	PF13556.1	gi|15921765|ref|NP_377434.1|	-	0.044	13.3	0.1	0.071	12.7	0.1	1.3	1	0	0	1	1	1	0	PucR	C-terminal	helix-turn-helix	domain
TetR_N	PF00440.18	gi|15921765|ref|NP_377434.1|	-	0.044	13.4	0.0	0.13	11.9	0.0	1.7	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	tetR	family
HTH_psq	PF05225.11	gi|15921765|ref|NP_377434.1|	-	0.061	12.8	0.0	0.1	12.1	0.0	1.3	1	0	0	1	1	1	0	helix-turn-helix,	Psq	domain
HTH_5	PF01022.15	gi|15921765|ref|NP_377434.1|	-	0.073	12.7	0.2	0.16	11.6	0.2	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
HTH_38	PF13936.1	gi|15921765|ref|NP_377434.1|	-	0.074	12.6	0.0	0.15	11.6	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
Mga	PF05043.8	gi|15921765|ref|NP_377434.1|	-	0.075	13.3	0.0	0.21	11.8	0.0	1.7	2	0	0	2	2	1	0	Mga	helix-turn-helix	domain
Clp_N	PF02861.15	gi|15921765|ref|NP_377434.1|	-	0.08	12.8	0.1	0.14	12.0	0.0	1.4	1	0	0	1	1	1	0	Clp	amino	terminal	domain
EAP30	PF04157.11	gi|15921765|ref|NP_377434.1|	-	0.1	11.7	0.1	0.17	10.9	0.0	1.3	1	0	0	1	1	1	0	EAP30/Vps36	family
Dabb	PF07876.7	gi|15921765|ref|NP_377434.1|	-	0.1	13.0	0.0	0.21	12.0	0.0	1.6	1	0	0	1	1	1	0	Stress	responsive	A/B	Barrel	Domain
CAF1	PF04857.15	gi|15921765|ref|NP_377434.1|	-	0.11	11.8	0.1	0.5	9.6	0.0	1.9	1	1	0	1	1	1	0	CAF1	family	ribonuclease
DUF4250	PF14056.1	gi|15921765|ref|NP_377434.1|	-	0.12	12.1	0.5	0.27	11.0	0.3	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4250)
PCI	PF01399.22	gi|15921765|ref|NP_377434.1|	-	0.12	12.7	0.3	0.39	11.0	0.0	1.9	2	1	0	2	2	2	0	PCI	domain
MarC	PF01914.12	gi|15921766|ref|NP_377435.1|	-	2.5e-31	108.3	16.9	3e-31	108.1	11.7	1.1	1	0	0	1	1	1	1	MarC	family	integral	membrane	protein
LysE	PF01810.13	gi|15921766|ref|NP_377435.1|	-	0.53	9.5	11.7	0.083	12.1	1.1	2.3	1	1	1	2	2	2	0	LysE	type	translocator
Pkr1	PF08636.5	gi|15921766|ref|NP_377435.1|	-	4.7	7.3	7.8	0.47	10.5	1.5	2.1	2	0	0	2	2	2	0	ER	protein	Pkr1
IncA	PF04156.9	gi|15921767|ref|NP_377436.1|	-	0.0008	19.0	8.9	0.001	18.7	6.2	1.0	1	0	0	1	1	1	1	IncA	protein
Poty_PP	PF08440.5	gi|15921767|ref|NP_377436.1|	-	0.0038	16.3	1.6	0.0044	16.1	1.1	1.0	1	0	0	1	1	1	1	Potyviridae	polyprotein
bZIP_1	PF00170.16	gi|15921767|ref|NP_377436.1|	-	0.014	15.3	0.3	0.014	15.3	0.2	2.3	2	1	1	3	3	3	0	bZIP	transcription	factor
Terminase_2	PF03592.11	gi|15921767|ref|NP_377436.1|	-	0.096	12.9	2.0	0.13	12.5	1.4	1.2	1	0	0	1	1	1	0	Terminase	small	subunit
Orbi_VP5	PF00901.12	gi|15921767|ref|NP_377436.1|	-	0.15	10.2	5.1	0.18	9.9	3.5	1.0	1	0	0	1	1	1	0	Orbivirus	outer	capsid	protein	VP5
HSP33	PF01430.14	gi|15921767|ref|NP_377436.1|	-	0.24	10.5	2.6	0.26	10.3	1.8	1.0	1	0	0	1	1	1	0	Hsp33	protein
COG5	PF10392.4	gi|15921767|ref|NP_377436.1|	-	0.42	10.5	3.9	0.62	10.0	2.7	1.3	1	0	0	1	1	1	0	Golgi	transport	complex	subunit	5
FliS	PF02561.9	gi|15921767|ref|NP_377436.1|	-	0.44	10.4	3.1	0.46	10.3	1.2	1.5	1	1	0	1	1	1	0	Flagellar	protein	FliS
TMCO5	PF14992.1	gi|15921767|ref|NP_377436.1|	-	0.46	9.5	8.4	0.58	9.2	5.8	1.1	1	0	0	1	1	1	0	TMCO5	family
FlaC_arch	PF05377.6	gi|15921767|ref|NP_377436.1|	-	0.55	10.1	4.3	1.4	8.8	0.4	2.6	2	1	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
DivIC	PF04977.10	gi|15921767|ref|NP_377436.1|	-	0.94	9.0	3.5	0.98	8.9	0.1	2.4	2	1	1	3	3	3	0	Septum	formation	initiator
ATG16	PF08614.6	gi|15921767|ref|NP_377436.1|	-	0.95	9.2	8.2	4.5	7.0	5.7	1.8	1	1	0	1	1	1	0	Autophagy	protein	16	(ATG16)
DUF972	PF06156.8	gi|15921767|ref|NP_377436.1|	-	0.99	9.7	7.1	0.5	10.7	0.8	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF972)
Zip	PF02535.17	gi|15921767|ref|NP_377436.1|	-	1.5	7.7	3.7	2.2	7.1	2.5	1.3	1	0	0	1	1	1	0	ZIP	Zinc	transporter
Spc42p	PF11544.3	gi|15921767|ref|NP_377436.1|	-	3.7	7.5	7.9	17	5.3	0.1	3.0	2	1	1	3	3	3	0	Spindle	pole	body	component	Spc42p
PNPase	PF03726.9	gi|15921767|ref|NP_377436.1|	-	3.7	7.8	7.5	15	5.8	0.9	2.6	1	1	0	2	2	2	0	Polyribonucleotide	nucleotidyltransferase,	RNA	binding	domain
DHO_dh	PF01180.16	gi|15921769|ref|NP_377438.1|	-	5.5e-46	156.8	2.0	6.9e-46	156.5	1.4	1.1	1	0	0	1	1	1	1	Dihydroorotate	dehydrogenase
Amidohydro_1	PF01979.15	gi|15921770|ref|NP_377439.1|	-	1.3e-10	41.4	0.1	9.3e-09	35.3	0.0	2.2	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|15921770|ref|NP_377439.1|	-	6.5e-06	26.3	0.0	0.00021	21.4	0.0	2.2	2	0	0	2	2	2	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|15921770|ref|NP_377439.1|	-	0.0047	16.2	0.0	0.029	13.5	0.0	2.0	1	1	0	1	1	1	1	Amidohydrolase	family
DHODB_Fe-S_bind	PF10418.4	gi|15921771|ref|NP_377440.1|	-	3.8e-06	26.2	2.2	3.8e-06	26.2	1.5	1.9	2	0	0	2	2	2	1	Iron-sulfur	cluster	binding	domain	of	dihydroorotate	dehydrogenase	B
Fer2	PF00111.22	gi|15921771|ref|NP_377440.1|	-	0.078	12.7	0.3	0.14	11.9	0.2	1.5	1	0	0	1	1	1	0	2Fe-2S	iron-sulfur	cluster	binding	domain
PyrI	PF01948.13	gi|15921772|ref|NP_377441.1|	-	4.6e-37	125.9	8.2	9e-37	125.0	5.7	1.5	1	0	0	1	1	1	1	Aspartate	carbamoyltransferase	regulatory	chain,	allosteric	domain
PyrI_C	PF02748.10	gi|15921772|ref|NP_377441.1|	-	5.8e-16	57.6	1.4	1.1e-15	56.8	1.0	1.5	1	0	0	1	1	1	1	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
OTCace_N	PF02729.16	gi|15921773|ref|NP_377442.1|	-	1.2e-42	144.8	0.0	1.9e-42	144.2	0.0	1.3	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
OTCace	PF00185.19	gi|15921773|ref|NP_377442.1|	-	5e-35	120.7	0.0	7.2e-35	120.1	0.0	1.2	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
Pribosyltran	PF00156.22	gi|15921774|ref|NP_377443.1|	-	3.2e-20	72.1	0.9	9.2e-20	70.6	0.6	1.7	1	1	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.1	gi|15921774|ref|NP_377443.1|	-	0.0007	18.8	0.0	0.0011	18.1	0.0	1.3	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
PRTase_2	PF15609.1	gi|15921774|ref|NP_377443.1|	-	0.12	11.7	0.0	0.16	11.2	0.0	1.2	1	0	0	1	1	1	0	Phosphoribosyl	transferase
OMPdecase	PF00215.19	gi|15921775|ref|NP_377444.1|	-	2.2e-24	86.1	0.0	2.7e-24	85.8	0.0	1.1	1	0	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
JAB	PF01398.16	gi|15921776|ref|NP_377445.1|	-	0.047	13.4	0.1	0.11	12.2	0.0	1.7	2	0	0	2	2	2	0	JAB1/Mov34/MPN/PAD-1	ubiquitin	protease
PhoU	PF01895.14	gi|15921777|ref|NP_377446.1|	-	7.6e-21	74.3	9.8	4.7e-16	59.0	0.7	3.0	3	0	0	3	3	3	2	PhoU	domain
Antitoxin-MazE	PF04014.13	gi|15921777|ref|NP_377446.1|	-	3.9e-10	39.2	0.0	8.2e-10	38.1	0.0	1.6	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
HTH_5	PF01022.15	gi|15921779|ref|NP_377448.1|	-	2.7e-11	42.9	0.1	4.2e-11	42.3	0.1	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|15921779|ref|NP_377448.1|	-	1.1e-06	28.3	0.0	1.7e-06	27.7	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|15921779|ref|NP_377448.1|	-	2.2e-05	23.7	0.3	3.9e-05	22.9	0.2	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.14	gi|15921779|ref|NP_377448.1|	-	0.00028	20.5	0.0	0.00042	19.9	0.0	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_11	PF08279.7	gi|15921779|ref|NP_377448.1|	-	0.0043	16.6	0.1	0.0081	15.7	0.0	1.5	1	0	0	1	1	1	1	HTH	domain
HTH_40	PF14493.1	gi|15921779|ref|NP_377448.1|	-	0.0048	17.0	0.3	0.0077	16.4	0.0	1.5	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_29	PF13551.1	gi|15921779|ref|NP_377448.1|	-	0.01	15.9	0.0	0.012	15.7	0.0	1.2	1	0	0	1	1	1	0	Winged	helix-turn	helix
HTH_28	PF13518.1	gi|15921779|ref|NP_377448.1|	-	0.03	14.3	0.0	0.047	13.7	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_45	PF14947.1	gi|15921779|ref|NP_377448.1|	-	0.042	13.6	0.2	0.078	12.8	0.1	1.5	1	1	0	1	1	1	0	Winged	helix-turn-helix
Pyr_redox_2	PF07992.9	gi|15921780|ref|NP_377449.1|	-	8.5e-37	126.9	13.5	4e-35	121.5	9.3	4.0	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|15921780|ref|NP_377449.1|	-	3.1e-26	91.5	0.0	6.2e-26	90.5	0.0	1.5	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.22	gi|15921780|ref|NP_377449.1|	-	1.5e-21	76.5	9.7	2.7e-18	66.1	0.1	3.0	3	0	0	3	3	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.19	gi|15921780|ref|NP_377449.1|	-	1e-10	41.0	7.6	7.1e-08	31.7	2.3	2.9	3	0	0	3	3	3	2	FAD	binding	domain
HI0933_like	PF03486.9	gi|15921780|ref|NP_377449.1|	-	5.9e-10	38.1	10.8	2.4e-05	22.9	1.2	3.8	3	1	1	4	4	4	3	HI0933-like	protein
NAD_binding_8	PF13450.1	gi|15921780|ref|NP_377449.1|	-	9e-10	38.4	2.6	2.2e-05	24.3	0.6	2.6	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_3	PF13738.1	gi|15921780|ref|NP_377449.1|	-	2.1e-09	37.7	0.2	1.3e-08	35.2	0.0	2.0	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|15921780|ref|NP_377449.1|	-	1.3e-08	34.1	12.4	2.8e-06	26.4	2.0	3.3	3	0	0	3	3	3	3	FAD	dependent	oxidoreductase
GIDA	PF01134.17	gi|15921780|ref|NP_377449.1|	-	2.1e-08	33.4	17.9	9.8e-07	27.9	4.2	4.4	3	2	1	4	4	4	2	Glucose	inhibited	division	protein	A
FAD_oxidored	PF12831.2	gi|15921780|ref|NP_377449.1|	-	3.2e-08	33.0	1.8	1.2e-07	31.1	0.2	2.2	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Thi4	PF01946.12	gi|15921780|ref|NP_377449.1|	-	7.2e-06	25.2	0.9	0.002	17.2	0.3	2.6	2	0	0	2	2	2	2	Thi4	family
AlaDh_PNT_C	PF01262.16	gi|15921780|ref|NP_377449.1|	-	1.5e-05	24.6	1.1	0.11	12.0	0.3	2.5	2	0	0	2	2	2	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
FAD_binding_3	PF01494.14	gi|15921780|ref|NP_377449.1|	-	2.7e-05	23.4	2.1	0.0056	15.7	0.2	2.3	2	0	0	2	2	2	2	FAD	binding	domain
Trp_halogenase	PF04820.9	gi|15921780|ref|NP_377449.1|	-	0.0012	17.5	3.9	0.053	12.1	0.5	2.3	2	0	0	2	2	2	2	Tryptophan	halogenase
Lycopene_cycl	PF05834.7	gi|15921780|ref|NP_377449.1|	-	0.0016	17.4	6.2	0.13	11.1	0.8	2.5	3	0	0	3	3	3	2	Lycopene	cyclase	protein
TrkA_N	PF02254.13	gi|15921780|ref|NP_377449.1|	-	0.017	15.0	4.6	0.25	11.3	0.1	2.9	2	0	0	2	2	2	0	TrkA-N	domain
K_oxygenase	PF13434.1	gi|15921780|ref|NP_377449.1|	-	0.018	13.9	0.1	2.2	7.1	0.0	2.8	2	1	1	3	3	3	0	L-lysine	6-monooxygenase	(NADPH-requiring)
3HCDH_N	PF02737.13	gi|15921780|ref|NP_377449.1|	-	0.054	13.1	0.3	5.2	6.6	0.0	2.4	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_9	PF13454.1	gi|15921780|ref|NP_377449.1|	-	0.3	10.8	3.0	1.7	8.4	0.1	2.8	3	0	0	3	3	3	0	FAD-NAD(P)-binding
DUF3944	PF13099.1	gi|15921781|ref|NP_377450.1|	-	0.14	11.6	1.4	0.43	10.1	0.9	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF3944)
TYW3	PF02676.9	gi|15921782|ref|NP_377451.1|	-	2.1e-46	157.6	0.0	2.7e-46	157.3	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	TYW3
UCR_UQCRX_QCR9	PF05365.7	gi|15921782|ref|NP_377451.1|	-	0.077	12.6	0.3	0.34	10.5	0.0	2.1	2	0	0	2	2	2	0	Ubiquinol-cytochrome	C	reductase,	UQCRX/QCR9	like
DUF2262	PF10020.4	gi|15921782|ref|NP_377451.1|	-	0.081	13.1	2.4	0.11	12.6	0.9	1.9	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2262)
Fer4_14	PF13394.1	gi|15921783|ref|NP_377452.1|	-	2.8e-19	69.3	0.0	5.4e-19	68.3	0.0	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Radical_SAM	PF04055.16	gi|15921783|ref|NP_377452.1|	-	1.6e-17	64.2	0.0	2.1e-17	63.7	0.0	1.3	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|15921783|ref|NP_377452.1|	-	2.8e-11	43.7	0.1	6e-11	42.6	0.0	1.6	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
PFU	PF09070.6	gi|15921783|ref|NP_377452.1|	-	0.065	13.2	0.1	0.12	12.4	0.1	1.4	1	0	0	1	1	1	0	PFU	(PLAA	family	ubiquitin	binding)
MMR_HSR1	PF01926.18	gi|15921784|ref|NP_377453.1|	-	1.6e-19	69.9	0.4	3.8e-19	68.7	0.3	1.8	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
NOG1	PF06858.9	gi|15921784|ref|NP_377453.1|	-	5.5e-19	67.7	3.2	2e-18	65.9	0.5	2.5	2	0	0	2	2	2	1	Nucleolar	GTP-binding	protein	1	(NOG1)
FeoB_N	PF02421.13	gi|15921784|ref|NP_377453.1|	-	1.5e-14	53.5	0.5	2.3e-14	52.9	0.4	1.3	1	0	0	1	1	1	1	Ferrous	iron	transport	protein	B
GTP_EFTU	PF00009.22	gi|15921784|ref|NP_377453.1|	-	9.2e-07	28.4	2.0	0.00037	19.9	1.4	3.0	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
Miro	PF08477.8	gi|15921784|ref|NP_377453.1|	-	4.2e-06	27.2	0.1	7.6e-06	26.4	0.1	1.5	1	0	0	1	1	1	1	Miro-like	protein
PduV-EutP	PF10662.4	gi|15921784|ref|NP_377453.1|	-	5.8e-05	22.6	0.3	0.00016	21.1	0.2	1.8	1	1	0	1	1	1	1	Ethanolamine	utilisation	-	propanediol	utilisation
Dynamin_N	PF00350.18	gi|15921784|ref|NP_377453.1|	-	8.6e-05	22.4	1.8	0.00051	19.8	0.2	2.3	2	1	1	3	3	3	1	Dynamin	family
Ras	PF00071.17	gi|15921784|ref|NP_377453.1|	-	0.00015	21.1	0.1	0.00033	20.0	0.0	1.6	1	1	0	1	1	1	1	Ras	family
AAA_17	PF13207.1	gi|15921784|ref|NP_377453.1|	-	0.00017	22.4	1.4	0.00054	20.7	0.0	2.6	2	2	0	2	2	2	1	AAA	domain
NTPase_1	PF03266.10	gi|15921784|ref|NP_377453.1|	-	0.00075	19.2	0.6	0.006	16.3	0.0	2.3	2	0	0	2	2	2	1	NTPase
DUF258	PF03193.11	gi|15921784|ref|NP_377453.1|	-	0.0011	18.1	0.4	0.016	14.4	0.1	2.6	2	1	0	2	2	2	1	Protein	of	unknown	function,	DUF258
AIG1	PF04548.11	gi|15921784|ref|NP_377453.1|	-	0.0036	16.4	0.3	0.0088	15.1	0.2	1.8	1	1	0	1	1	1	1	AIG1	family
MobB	PF03205.9	gi|15921784|ref|NP_377453.1|	-	0.0038	16.9	0.0	0.011	15.4	0.0	1.8	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
DUF832	PF05734.6	gi|15921784|ref|NP_377453.1|	-	0.0056	15.9	0.0	0.012	14.8	0.0	1.5	1	0	0	1	1	1	1	Herpesvirus	protein	of	unknown	function	(DUF832)
AAA_18	PF13238.1	gi|15921784|ref|NP_377453.1|	-	0.0081	16.4	3.2	0.016	15.4	0.4	2.7	2	1	0	2	2	2	1	AAA	domain
AAA_14	PF13173.1	gi|15921784|ref|NP_377453.1|	-	0.014	15.2	0.9	0.062	13.2	0.0	2.4	2	1	0	2	2	2	0	AAA	domain
SRPRB	PF09439.5	gi|15921784|ref|NP_377453.1|	-	0.016	14.4	0.5	0.058	12.6	0.1	2.2	2	1	0	2	2	2	0	Signal	recognition	particle	receptor	beta	subunit
AAA_25	PF13481.1	gi|15921784|ref|NP_377453.1|	-	0.026	13.9	0.0	0.063	12.6	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
ArgK	PF03308.11	gi|15921784|ref|NP_377453.1|	-	0.033	12.9	0.3	0.95	8.1	0.0	2.7	3	0	0	3	3	3	0	ArgK	protein
ATP_bind_1	PF03029.12	gi|15921784|ref|NP_377453.1|	-	0.067	12.7	0.1	5.4	6.4	0.0	2.3	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
PPV_E1_C	PF00519.12	gi|15921784|ref|NP_377453.1|	-	0.074	11.6	0.0	0.11	11.0	0.0	1.2	1	0	0	1	1	1	0	Papillomavirus	helicase
Polysacc_synt_2	PF02719.10	gi|15921784|ref|NP_377453.1|	-	0.077	11.8	0.3	0.12	11.2	0.2	1.3	1	0	0	1	1	1	0	Polysaccharide	biosynthesis	protein
DnaB_C	PF03796.10	gi|15921784|ref|NP_377453.1|	-	0.083	11.7	0.4	0.22	10.3	0.3	1.7	1	1	0	1	1	1	0	DnaB-like	helicase	C	terminal	domain
AAA_22	PF13401.1	gi|15921784|ref|NP_377453.1|	-	0.092	12.8	0.0	0.28	11.3	0.0	2.0	1	1	0	1	1	1	0	AAA	domain
Arch_ATPase	PF01637.13	gi|15921784|ref|NP_377453.1|	-	0.092	12.4	4.5	0.22	11.1	1.1	2.6	2	1	0	2	2	2	0	Archaeal	ATPase
HTH_40	PF14493.1	gi|15921784|ref|NP_377453.1|	-	0.13	12.4	1.7	0.69	10.1	0.0	2.9	2	1	1	3	3	3	0	Helix-turn-helix	domain
DUF737	PF05300.6	gi|15921784|ref|NP_377453.1|	-	1.5	8.7	5.2	37	4.2	0.3	3.2	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF737)
tRNA_bind	PF01588.15	gi|15921785|ref|NP_377454.1|	-	9.9e-29	99.0	0.1	1.1e-28	98.8	0.1	1.0	1	0	0	1	1	1	1	Putative	tRNA	binding	domain
SAICAR_synt	PF01259.13	gi|15921786|ref|NP_377455.1|	-	8.4e-54	182.2	0.4	9.3e-54	182.1	0.3	1.0	1	0	0	1	1	1	1	SAICAR	synthetase
PurS	PF02700.9	gi|15921787|ref|NP_377456.1|	-	6.9e-19	67.5	0.2	8e-19	67.3	0.1	1.0	1	0	0	1	1	1	1	Phosphoribosylformylglycinamidine	(FGAM)	synthase
GATase_5	PF13507.1	gi|15921788|ref|NP_377457.1|	-	6.8e-29	100.5	0.0	7.2e-29	100.4	0.0	1.0	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
DUF2141	PF09912.4	gi|15921788|ref|NP_377457.1|	-	0.0085	15.7	0.1	0.016	14.8	0.1	1.6	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2141)
DUF4066	PF13278.1	gi|15921788|ref|NP_377457.1|	-	0.028	13.6	0.0	0.06	12.6	0.0	1.5	2	0	0	2	2	2	0	Putative	amidotransferase
GATase_3	PF07685.9	gi|15921788|ref|NP_377457.1|	-	0.035	13.7	0.2	0.093	12.3	0.2	1.7	2	0	0	2	2	2	0	CobB/CobQ-like	glutamine	amidotransferase	domain
AIRS	PF00586.19	gi|15921789|ref|NP_377458.1|	-	5.6e-35	119.4	0.2	2.4e-23	82.1	0.0	2.5	2	0	0	2	2	2	2	AIR	synthase	related	protein,	N-terminal	domain
AIRS_C	PF02769.17	gi|15921789|ref|NP_377458.1|	-	7.9e-33	113.6	0.2	8.3e-25	87.5	0.2	2.2	2	0	0	2	2	2	2	AIR	synthase	related	protein,	C-terminal	domain
Pribosyltran	PF00156.22	gi|15921790|ref|NP_377459.1|	-	4.8e-16	58.6	1.0	1e-15	57.5	0.7	1.5	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
GATase_6	PF13522.1	gi|15921790|ref|NP_377459.1|	-	2.5e-15	56.5	0.0	4.7e-15	55.7	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_2	PF00310.16	gi|15921790|ref|NP_377459.1|	-	1.1e-14	53.9	0.0	1.3e-06	27.4	0.0	3.2	2	1	1	3	3	3	3	Glutamine	amidotransferases	class-II
GATase_7	PF13537.1	gi|15921790|ref|NP_377459.1|	-	2.7e-14	52.9	0.0	2.7e-13	49.7	0.0	2.3	1	1	0	1	1	1	1	Glutamine	amidotransferase	domain
PRTase_3	PF15610.1	gi|15921790|ref|NP_377459.1|	-	0.0049	15.8	0.0	0.009	14.9	0.0	1.3	1	0	0	1	1	1	1	PRTase	ComF-like
GATase_4	PF13230.1	gi|15921790|ref|NP_377459.1|	-	0.14	10.8	0.0	0.57	8.8	0.0	1.8	2	0	0	2	2	2	0	Glutamine	amidotransferases	class-II
PRTase_2	PF15609.1	gi|15921790|ref|NP_377459.1|	-	0.14	11.4	0.0	0.22	10.8	0.0	1.2	1	0	0	1	1	1	0	Phosphoribosyl	transferase
Pribosyltran	PF00156.22	gi|15921791|ref|NP_377460.1|	-	1.3e-17	63.7	0.3	2.9e-17	62.5	0.2	1.5	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
GATase_7	PF13537.1	gi|15921791|ref|NP_377460.1|	-	0.0013	18.4	0.0	0.0023	17.6	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
PRTase_2	PF15609.1	gi|15921791|ref|NP_377460.1|	-	0.0017	17.7	0.0	0.0045	16.3	0.0	1.7	1	1	0	1	1	1	1	Phosphoribosyl	transferase
GATase_2	PF00310.16	gi|15921791|ref|NP_377460.1|	-	0.15	10.7	0.0	0.25	9.9	0.0	1.3	1	0	0	1	1	1	0	Glutamine	amidotransferases	class-II
GARS_A	PF01071.14	gi|15921792|ref|NP_377461.1|	-	1.4e-41	142.1	0.0	3.4e-41	140.9	0.0	1.6	2	0	0	2	2	2	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
GARS_N	PF02844.10	gi|15921792|ref|NP_377461.1|	-	1.7e-25	89.3	0.0	3.4e-25	88.4	0.0	1.5	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	N	domain
GARS_C	PF02843.11	gi|15921792|ref|NP_377461.1|	-	1.1e-10	41.5	0.0	2.1e-10	40.6	0.0	1.5	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	C	domain
ATP-grasp_4	PF13535.1	gi|15921792|ref|NP_377461.1|	-	8.8e-10	38.6	0.0	1.5e-09	37.8	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|15921792|ref|NP_377461.1|	-	2.4e-08	33.1	0.0	3.3e-08	32.6	0.0	1.1	1	0	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
CPSase_L_D2	PF02786.12	gi|15921792|ref|NP_377461.1|	-	0.019	14.2	0.0	0.032	13.4	0.0	1.3	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Sec34	PF04136.10	gi|15921792|ref|NP_377461.1|	-	0.13	11.9	0.0	0.25	11.0	0.0	1.4	1	0	0	1	1	1	0	Sec34-like	family
AIRS_C	PF02769.17	gi|15921793|ref|NP_377462.1|	-	5.1e-23	81.7	0.0	8.1e-23	81.1	0.0	1.3	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|15921793|ref|NP_377462.1|	-	1.2e-16	60.6	0.2	2.4e-16	59.7	0.1	1.4	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
DUF3505	PF12013.3	gi|15921794|ref|NP_377463.1|	-	0.00017	21.8	0.5	0.00025	21.2	0.3	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3505)
PRP21_like_P	PF12230.3	gi|15921794|ref|NP_377463.1|	-	0.0068	15.9	1.9	0.0097	15.4	1.3	1.4	1	1	0	1	1	1	1	Pre-mRNA	splicing	factor	PRP21	like	protein
PapB	PF03333.8	gi|15921794|ref|NP_377463.1|	-	0.0095	15.7	0.0	0.019	14.7	0.0	1.5	1	0	0	1	1	1	1	Adhesin	biosynthesis	transcription	regulatory	protein
Ins_P5_2-kin	PF06090.7	gi|15921794|ref|NP_377463.1|	-	0.01	14.8	0.1	0.013	14.5	0.1	1.2	1	0	0	1	1	1	0	Inositol-pentakisphosphate	2-kinase
POC1	PF10450.4	gi|15921794|ref|NP_377463.1|	-	0.016	14.0	0.1	0.021	13.5	0.1	1.2	1	0	0	1	1	1	0	POC1	chaperone
DUF4120	PF13496.1	gi|15921794|ref|NP_377463.1|	-	0.021	14.8	0.2	0.046	13.7	0.1	1.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4120)
DUF1792	PF08759.6	gi|15921794|ref|NP_377463.1|	-	0.055	13.0	0.2	0.084	12.4	0.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1792)
TrbI_Ftype	PF09677.5	gi|15921794|ref|NP_377463.1|	-	0.096	12.5	0.1	0.43	10.4	0.1	1.9	2	0	0	2	2	2	0	Type-F	conjugative	transfer	system	protein	(TrbI_Ftype)
DUF1476	PF07345.6	gi|15921794|ref|NP_377463.1|	-	0.13	12.5	0.3	2.5	8.3	0.1	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF1476)
Arginosuc_synth	PF00764.14	gi|15921795|ref|NP_377464.1|	-	3.7e-141	470.6	0.4	4.3e-141	470.4	0.3	1.0	1	0	0	1	1	1	1	Arginosuccinate	synthase
QueC	PF06508.8	gi|15921795|ref|NP_377464.1|	-	5.8e-05	22.4	0.1	0.00014	21.2	0.0	1.7	2	0	0	2	2	2	1	Queuosine	biosynthesis	protein	QueC
tRNA_Me_trans	PF03054.11	gi|15921795|ref|NP_377464.1|	-	0.084	11.4	0.0	0.13	10.8	0.0	1.4	1	0	0	1	1	1	0	tRNA	methyl	transferase
ATP_bind_3	PF01171.15	gi|15921795|ref|NP_377464.1|	-	0.086	12.3	0.0	0.34	10.3	0.0	2.0	1	1	0	1	1	1	0	PP-loop	family
ETF	PF01012.16	gi|15921795|ref|NP_377464.1|	-	0.092	12.4	0.1	3.7	7.2	0.0	2.6	2	1	1	3	3	3	0	Electron	transfer	flavoprotein	domain
Asn_synthase	PF00733.16	gi|15921795|ref|NP_377464.1|	-	0.1	12.0	0.0	0.16	11.4	0.0	1.3	1	0	0	1	1	1	0	Asparagine	synthase
Lyase_1	PF00206.15	gi|15921796|ref|NP_377465.1|	-	8.6e-42	143.4	0.0	1.4e-41	142.7	0.0	1.3	1	0	0	1	1	1	1	Lyase
ASL_C2	PF14698.1	gi|15921796|ref|NP_377465.1|	-	0.00035	20.5	0.0	0.0012	18.8	0.0	1.9	2	0	0	2	2	2	1	Argininosuccinate	lyase	C-terminal
CPSase_sm_chain	PF00988.17	gi|15921797|ref|NP_377466.1|	-	4.8e-49	165.2	0.0	6.8e-49	164.7	0.0	1.2	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	small	chain,	CPSase	domain
GATase	PF00117.23	gi|15921797|ref|NP_377466.1|	-	2.9e-38	131.2	0.0	5.6e-38	130.3	0.0	1.5	2	0	0	2	2	2	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|15921797|ref|NP_377466.1|	-	9.4e-07	28.4	0.1	0.00014	21.3	0.1	2.2	1	1	0	1	1	1	1	Peptidase	C26
MRG	PF05712.8	gi|15921797|ref|NP_377466.1|	-	0.12	11.2	0.0	4.3	6.1	0.0	2.1	2	0	0	2	2	2	0	MRG
CPSase_L_D2	PF02786.12	gi|15921798|ref|NP_377467.1|	-	2e-93	311.4	0.0	2.3e-64	216.5	0.0	2.3	2	0	0	2	2	2	2	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
CPSase_L_D3	PF02787.14	gi|15921798|ref|NP_377467.1|	-	1.7e-39	134.3	0.3	3.8e-39	133.2	0.2	1.6	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
CPSase_L_chain	PF00289.17	gi|15921798|ref|NP_377467.1|	-	2.3e-34	117.7	0.0	4e-20	71.9	0.0	2.6	2	0	0	2	2	2	2	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
ATP-grasp_4	PF13535.1	gi|15921798|ref|NP_377467.1|	-	1.5e-29	103.0	0.0	4.6e-16	59.0	0.0	2.2	2	0	0	2	2	2	2	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|15921798|ref|NP_377467.1|	-	8.3e-23	80.6	0.0	3.1e-12	45.8	0.0	4.2	3	1	0	3	3	3	3	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp	PF02222.17	gi|15921798|ref|NP_377467.1|	-	2.6e-18	65.9	0.1	6e-09	35.4	0.0	2.3	2	0	0	2	2	2	2	ATP-grasp	domain
Dala_Dala_lig_C	PF07478.8	gi|15921798|ref|NP_377467.1|	-	2.1e-16	59.9	0.2	5.5e-09	35.7	0.1	2.6	2	0	0	2	2	2	2	D-ala	D-ala	ligase	C-terminus
ATP-grasp_3	PF02655.9	gi|15921798|ref|NP_377467.1|	-	2.5e-09	37.2	0.4	2.3e-05	24.3	0.2	3.2	2	1	0	2	2	2	2	ATP-grasp	domain
RimK	PF08443.6	gi|15921798|ref|NP_377467.1|	-	1.3e-07	31.3	0.0	0.00066	19.2	0.0	2.9	2	0	0	2	2	2	2	RimK-like	ATP-grasp	domain
ATP-grasp_5	PF13549.1	gi|15921798|ref|NP_377467.1|	-	4.3e-07	29.3	0.0	0.0026	17.0	0.0	2.6	2	0	0	2	2	2	2	ATP-grasp	domain
GARS_A	PF01071.14	gi|15921798|ref|NP_377467.1|	-	8.8e-07	28.6	0.3	0.00041	19.9	0.1	2.9	2	1	0	2	2	2	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATP-grasp_2	PF08442.5	gi|15921798|ref|NP_377467.1|	-	0.00088	18.7	0.0	0.13	11.5	0.0	2.7	2	0	0	2	2	2	1	ATP-grasp	domain
MGS	PF02142.17	gi|15921798|ref|NP_377467.1|	-	0.022	14.6	1.3	0.24	11.3	0.4	3.1	3	0	0	3	3	3	0	MGS-like	domain
RimK	PF08443.6	gi|15921799|ref|NP_377468.1|	-	2.2e-38	131.6	0.0	4e-38	130.8	0.0	1.4	2	0	0	2	2	2	1	RimK-like	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|15921799|ref|NP_377468.1|	-	1.6e-07	30.4	0.0	2.1e-07	30.0	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp_3	PF02655.9	gi|15921799|ref|NP_377468.1|	-	2.9e-07	30.5	0.0	4.9e-07	29.7	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|15921799|ref|NP_377468.1|	-	2.9e-07	30.4	0.0	4.3e-07	29.8	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
GSH-S_ATP	PF02955.11	gi|15921799|ref|NP_377468.1|	-	8.5e-07	28.2	0.0	1.6e-06	27.3	0.0	1.4	1	0	0	1	1	1	1	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
Translin	PF01997.11	gi|15921800|ref|NP_377469.1|	-	1.6e-27	96.4	3.3	2.1e-27	96.0	2.3	1.2	1	0	0	1	1	1	1	Translin	family
SDH_sah	PF01972.11	gi|15921800|ref|NP_377469.1|	-	0.012	14.4	0.2	0.02	13.6	0.1	1.5	1	1	0	1	1	1	0	Serine	dehydrogenase	proteinase
3HCDH_N	PF02737.13	gi|15921801|ref|NP_377470.1|	-	7.9e-48	162.4	0.0	1.3e-47	161.7	0.0	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
3HCDH	PF00725.17	gi|15921801|ref|NP_377470.1|	-	7.2e-18	64.7	0.1	1.7e-17	63.5	0.1	1.7	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
NAD_Gly3P_dh_N	PF01210.18	gi|15921801|ref|NP_377470.1|	-	0.0016	18.2	0.8	0.0046	16.7	0.1	2.0	2	1	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
NAD_binding_2	PF03446.10	gi|15921801|ref|NP_377470.1|	-	0.014	15.2	0.0	0.033	14.0	0.0	1.6	1	0	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
ApbA	PF02558.11	gi|15921801|ref|NP_377470.1|	-	0.16	11.4	0.1	0.34	10.3	0.0	1.6	1	1	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
Cupin_2	PF07883.6	gi|15921802|ref|NP_377471.1|	-	5.2e-14	51.4	0.2	7.4e-14	50.9	0.1	1.2	1	0	0	1	1	1	1	Cupin	domain
Cupin_1	PF00190.17	gi|15921802|ref|NP_377471.1|	-	5.6e-12	45.3	0.0	1.1e-11	44.4	0.0	1.4	1	0	0	1	1	1	1	Cupin
AraC_binding	PF02311.14	gi|15921802|ref|NP_377471.1|	-	9.5e-09	35.0	0.0	1.5e-08	34.3	0.0	1.2	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
ARD	PF03079.9	gi|15921802|ref|NP_377471.1|	-	5.5e-05	23.1	0.3	0.00026	20.9	0.0	1.9	2	0	0	2	2	2	1	ARD/ARD'	family
CENP-C_C	PF11699.3	gi|15921802|ref|NP_377471.1|	-	0.0006	19.7	0.1	0.00096	19.0	0.0	1.3	1	0	0	1	1	1	1	Mif2/CENP-C	like
Asp_Arg_Hydrox	PF05118.10	gi|15921802|ref|NP_377471.1|	-	0.0015	18.3	0.0	0.0026	17.5	0.0	1.5	1	0	0	1	1	1	1	Aspartyl/Asparaginyl	beta-hydroxylase
Auxin_BP	PF02041.11	gi|15921802|ref|NP_377471.1|	-	0.045	13.1	0.1	0.12	11.8	0.0	1.7	1	1	0	1	1	1	0	Auxin	binding	protein
Cupin_3	PF05899.7	gi|15921802|ref|NP_377471.1|	-	0.054	12.8	0.0	0.087	12.2	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF861)
GPI	PF06560.6	gi|15921802|ref|NP_377471.1|	-	0.11	11.4	0.6	0.34	9.8	0.4	1.8	1	1	0	1	1	1	0	Glucose-6-phosphate	isomerase	(GPI)
VIT1	PF01988.14	gi|15921803|ref|NP_377472.1|	-	6.2e-16	58.5	11.8	9.8e-15	54.6	8.2	1.9	1	1	0	1	1	1	1	VIT	family
MFS_1	PF07690.11	gi|15921803|ref|NP_377472.1|	-	0.0013	17.5	8.1	0.21	10.2	5.6	2.0	2	0	0	2	2	2	2	Major	Facilitator	Superfamily
RestrictionSfiI	PF11487.3	gi|15921803|ref|NP_377472.1|	-	0.049	12.7	0.0	0.07	12.2	0.0	1.1	1	0	0	1	1	1	0	Type	II	restriction	enzyme	SfiI
CarboxypepD_reg	PF13620.1	gi|15921804|ref|NP_377473.1|	-	0.013	15.5	0.3	0.05	13.6	0.1	2.0	2	1	0	2	2	2	0	Carboxypeptidase	regulatory-like	domain
Cna_B	PF05738.8	gi|15921804|ref|NP_377473.1|	-	0.072	12.8	5.8	0.087	12.5	1.6	2.2	2	0	0	2	2	2	0	Cna	protein	B-type	domain
Adenosine_kin	PF04008.9	gi|15921805|ref|NP_377474.1|	-	1e-78	262.2	0.1	1.1e-78	262.0	0.0	1.0	1	0	0	1	1	1	1	Adenosine	specific	kinase
DUF309	PF03745.9	gi|15921806|ref|NP_377475.1|	-	3.1e-15	55.3	0.0	4.2e-15	54.9	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF309)
PurS	PF02700.9	gi|15921806|ref|NP_377475.1|	-	0.004	17.0	0.0	0.0075	16.2	0.0	1.4	1	0	0	1	1	1	1	Phosphoribosylformylglycinamidine	(FGAM)	synthase
Radical_SAM	PF04055.16	gi|15921808|ref|NP_377477.1|	-	5e-17	62.5	0.2	4.2e-16	59.5	0.0	2.4	3	0	0	3	3	3	1	Radical	SAM	superfamily
zf-ribbon_3	PF13248.1	gi|15921808|ref|NP_377477.1|	-	0.00025	20.1	0.0	0.00025	20.1	0.0	2.6	4	1	0	4	4	4	1	zinc-ribbon	domain
Fer4_12	PF13353.1	gi|15921808|ref|NP_377477.1|	-	0.0048	17.0	0.1	0.017	15.2	0.0	1.9	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
DZR	PF12773.2	gi|15921808|ref|NP_377477.1|	-	0.0066	16.2	0.0	0.0066	16.2	0.0	2.6	3	0	0	3	3	3	1	Double	zinc	ribbon
UPF0547	PF10571.4	gi|15921808|ref|NP_377477.1|	-	0.0067	16.1	0.1	0.017	14.8	0.1	1.7	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
TF_Zn_Ribbon	PF08271.7	gi|15921808|ref|NP_377477.1|	-	0.044	13.1	2.2	0.84	9.0	1.4	2.7	1	1	0	1	1	1	0	TFIIB	zinc-binding
IBR	PF01485.16	gi|15921808|ref|NP_377477.1|	-	0.082	12.7	0.1	0.082	12.7	0.1	2.0	3	0	0	3	3	3	0	IBR	domain
zinc_ribbon_2	PF13240.1	gi|15921808|ref|NP_377477.1|	-	0.5	9.9	9.3	0.89	9.1	0.2	3.1	3	0	0	3	3	3	0	zinc-ribbon	domain
zf-C2H2_2	PF12756.2	gi|15921808|ref|NP_377477.1|	-	3.4	7.8	4.8	6.8	6.8	0.0	3.0	3	0	0	3	3	3	0	C2H2	type	zinc-finger	(2	copies)
DNA_RNApol_7kD	PF03604.8	gi|15921808|ref|NP_377477.1|	-	4.7	6.7	12.7	1.5	8.3	0.0	4.3	4	0	0	4	4	4	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
ECH	PF00378.15	gi|15921809|ref|NP_377478.1|	-	4e-75	252.1	0.0	4.5e-75	251.9	0.0	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
Peptidase_S49	PF01343.13	gi|15921809|ref|NP_377478.1|	-	0.048	13.4	0.0	0.22	11.3	0.0	2.0	2	0	0	2	2	2	0	Peptidase	family	S49
DNA_pol3_delta2	PF13177.1	gi|15921809|ref|NP_377478.1|	-	0.14	11.7	0.7	7.7	6.1	0.1	2.2	2	0	0	2	2	2	0	DNA	polymerase	III,	delta	subunit
UbiA	PF01040.13	gi|15921811|ref|NP_377480.1|	-	7e-28	97.5	26.2	9e-28	97.1	18.1	1.1	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
DUF2189	PF09955.4	gi|15921811|ref|NP_377480.1|	-	0.0025	17.7	2.7	0.0025	17.7	1.9	3.1	3	2	0	3	3	3	1	Predicted	integral	membrane	protein	(DUF2189)
Glycoprotein_B	PF00606.13	gi|15921811|ref|NP_377480.1|	-	0.33	8.9	0.6	0.5	8.3	0.4	1.2	1	0	0	1	1	1	0	Herpesvirus	Glycoprotein	B
Homoserine_dh	PF00742.14	gi|15921812|ref|NP_377481.1|	-	2.4e-47	160.9	0.0	4.2e-47	160.1	0.0	1.4	1	0	0	1	1	1	1	Homoserine	dehydrogenase
NAD_binding_3	PF03447.11	gi|15921812|ref|NP_377481.1|	-	2.6e-10	40.6	0.0	5.4e-10	39.6	0.0	1.5	2	0	0	2	2	2	1	Homoserine	dehydrogenase,	NAD	binding	domain
B3_4	PF03483.12	gi|15921813|ref|NP_377482.1|	-	6.5e-28	97.3	0.0	1.5e-27	96.2	0.0	1.6	2	0	0	2	2	2	1	B3/4	domain
NikR_C	PF08753.6	gi|15921814|ref|NP_377483.1|	-	1.3e-20	73.0	0.6	2e-20	72.4	0.4	1.3	1	0	0	1	1	1	1	NikR	C	terminal	nickel	binding	domain
RHH_1	PF01402.16	gi|15921814|ref|NP_377483.1|	-	2.3e-05	24.1	0.4	4.4e-05	23.1	0.3	1.5	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
DUF2811	PF10929.3	gi|15921814|ref|NP_377483.1|	-	0.00015	21.6	0.0	0.00027	20.8	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2811)
RHH_3	PF12651.2	gi|15921814|ref|NP_377483.1|	-	0.001	18.7	1.5	0.0021	17.7	0.4	2.0	2	0	0	2	2	2	1	Ribbon-helix-helix	domain
Pox_VLTF3	PF04947.9	gi|15921814|ref|NP_377483.1|	-	0.0015	18.0	0.7	0.0022	17.5	0.4	1.3	1	1	0	1	1	1	1	Poxvirus	Late	Transcription	Factor	VLTF3	like
Urm1	PF09138.6	gi|15921814|ref|NP_377483.1|	-	0.012	15.6	0.2	0.023	14.8	0.2	1.4	1	0	0	1	1	1	0	Urm1	(Ubiquitin	related	modifier)
TFIID_90kDa	PF04494.10	gi|15921814|ref|NP_377483.1|	-	0.026	14.5	0.5	3.5	7.6	0.0	2.2	2	0	0	2	2	2	0	WD40	associated	region	in	TFIID	subunit
DUF211	PF02680.9	gi|15921814|ref|NP_377483.1|	-	0.17	11.6	1.5	0.7	9.7	0.0	2.1	1	1	1	2	2	2	0	Uncharacterized	ArCR,	COG1888
PmbA_TldD	PF01523.11	gi|15921815|ref|NP_377484.1|	-	7e-45	153.5	0.2	8.8e-45	153.2	0.1	1.1	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
PmbA_TldD	PF01523.11	gi|15921816|ref|NP_377485.1|	-	3.7e-38	131.4	0.0	4.9e-38	131.0	0.0	1.1	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
mit_SMPDase	PF14724.1	gi|15921816|ref|NP_377485.1|	-	0.041	11.6	0.0	0.055	11.2	0.0	1.1	1	0	0	1	1	1	0	Mitochondrial-associated	sphingomyelin	phosphodiesterase
Usp	PF00582.21	gi|15921817|ref|NP_377486.1|	-	1.1e-37	129.3	0.5	1.2e-37	129.1	0.4	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
BPL_LplA_LipB	PF03099.14	gi|15921818|ref|NP_377487.1|	-	1.7e-19	70.0	0.0	2.7e-19	69.4	0.0	1.3	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
Mrr_N	PF14338.1	gi|15921818|ref|NP_377487.1|	-	0.083	12.9	0.3	0.18	11.9	0.2	1.5	1	0	0	1	1	1	0	Mrr	N-terminal	domain
MutL	PF13941.1	gi|15921818|ref|NP_377487.1|	-	0.12	10.6	0.0	0.17	10.1	0.0	1.1	1	0	0	1	1	1	0	MutL	protein
Sua5_yciO_yrdC	PF01300.13	gi|15921819|ref|NP_377488.1|	-	6.4e-57	191.6	0.0	9.1e-57	191.1	0.0	1.2	1	0	0	1	1	1	1	Telomere	recombination
SUA5	PF03481.8	gi|15921819|ref|NP_377488.1|	-	1.1e-27	96.5	0.0	1.6e-27	96.0	0.0	1.2	1	0	0	1	1	1	1	Putative	GTP-binding	controlling	metal-binding
DUF1759	PF03564.10	gi|15921819|ref|NP_377488.1|	-	0.12	12.2	0.0	0.24	11.2	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1759)
Oxidored_q6	PF01058.17	gi|15921820|ref|NP_377489.1|	-	6.8e-21	74.2	0.0	1e-20	73.6	0.0	1.3	1	0	0	1	1	1	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
Peptidase_M20	PF01546.23	gi|15921822|ref|NP_377491.1|	-	1.7e-39	135.2	0.0	2.1e-39	134.9	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|15921822|ref|NP_377491.1|	-	9.2e-19	67.2	0.0	1.7e-18	66.3	0.0	1.4	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Peptidase_M28	PF04389.12	gi|15921822|ref|NP_377491.1|	-	0.00036	20.3	0.0	0.011	15.5	0.0	2.1	2	0	0	2	2	2	1	Peptidase	family	M28
Peptidase_M42	PF05343.9	gi|15921822|ref|NP_377491.1|	-	0.0041	15.9	0.0	0.17	10.6	0.0	2.7	2	1	1	3	3	3	1	M42	glutamyl	aminopeptidase
MFS_1	PF07690.11	gi|15921823|ref|NP_377492.1|	-	3.6e-22	78.5	36.7	5.3e-18	64.8	14.3	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|15921823|ref|NP_377492.1|	-	0.0036	15.4	0.3	0.0036	15.4	0.2	1.5	2	0	0	2	2	2	1	Transmembrane	secretion	effector
YwiC	PF14256.1	gi|15921823|ref|NP_377492.1|	-	1.1	9.3	11.6	5.5	7.0	1.9	3.2	2	1	0	2	2	2	0	YwiC-like	protein
POR	PF01558.13	gi|15921824|ref|NP_377493.1|	-	1.9e-37	128.8	0.0	2.2e-37	128.6	0.0	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
Aminotran_1_2	PF00155.16	gi|15921824|ref|NP_377493.1|	-	0.09	11.7	0.1	2.1	7.2	0.1	2.0	1	1	0	1	1	1	0	Aminotransferase	class	I	and	II
POR_N	PF01855.14	gi|15921825|ref|NP_377494.1|	-	4.2e-70	235.8	2.2	5.6e-70	235.4	1.6	1.1	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Transketolase_C	PF02780.15	gi|15921825|ref|NP_377494.1|	-	4.4e-06	26.6	0.0	1e-05	25.4	0.0	1.6	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
TPP_enzyme_N	PF02776.13	gi|15921825|ref|NP_377494.1|	-	0.097	12.1	0.7	0.19	11.2	0.5	1.5	1	0	0	1	1	1	0	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
CHASE4	PF05228.8	gi|15921825|ref|NP_377494.1|	-	0.15	11.6	0.5	0.32	10.5	0.3	1.5	1	0	0	1	1	1	0	CHASE4	domain
TPP_enzyme_C	PF02775.16	gi|15921826|ref|NP_377495.1|	-	1.1e-18	67.2	0.1	2.3e-18	66.2	0.0	1.5	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
DXP_synthase_N	PF13292.1	gi|15921826|ref|NP_377495.1|	-	0.00018	20.5	0.1	0.00041	19.3	0.0	1.5	2	0	0	2	2	2	1	1-deoxy-D-xylulose-5-phosphate	synthase
E1_dh	PF00676.15	gi|15921826|ref|NP_377495.1|	-	0.025	13.3	0.1	0.025	13.3	0.1	1.7	2	0	0	2	2	2	0	Dehydrogenase	E1	component
VIT1	PF01988.14	gi|15921827|ref|NP_377496.1|	-	5.4e-46	156.7	7.3	5.4e-46	156.7	5.0	1.7	2	0	0	2	2	2	1	VIT	family
Rubrerythrin	PF02915.12	gi|15921827|ref|NP_377496.1|	-	0.0003	21.1	3.5	0.12	12.7	0.4	2.4	2	0	0	2	2	2	2	Rubrerythrin
DUF416	PF04222.7	gi|15921827|ref|NP_377496.1|	-	0.07	12.2	1.2	0.26	10.4	0.2	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF416)
DUF1517	PF07466.6	gi|15921827|ref|NP_377496.1|	-	0.076	11.9	2.0	0.56	9.1	0.7	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1517)
PaREP1	PF05942.6	gi|15921828|ref|NP_377497.1|	-	1.2e-18	66.9	0.1	1.5e-18	66.7	0.0	1.1	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
Antitoxin-MazE	PF04014.13	gi|15921829|ref|NP_377498.1|	-	3.7e-14	52.0	1.6	5e-14	51.6	1.1	1.2	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
DUF104	PF01954.11	gi|15921829|ref|NP_377498.1|	-	0.00077	19.4	1.6	0.00077	19.4	1.1	1.6	1	1	1	2	2	2	1	Protein	of	unknown	function	DUF104
AbrB-like	PF14250.1	gi|15921829|ref|NP_377498.1|	-	0.0022	17.8	0.0	0.0029	17.4	0.0	1.2	1	0	0	1	1	1	1	AbrB-like	transcriptional	regulator
CTP-dep_RFKase	PF01982.11	gi|15921829|ref|NP_377498.1|	-	0.045	13.3	0.2	0.068	12.8	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF120
DUF1905	PF08922.6	gi|15921829|ref|NP_377498.1|	-	0.097	12.2	0.1	0.15	11.6	0.1	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1905)
YcxB	PF14317.1	gi|15921829|ref|NP_377498.1|	-	0.13	11.5	0.4	5.6	6.2	0.0	2.2	2	0	0	2	2	2	0	YcxB-like	protein
OsmC	PF02566.14	gi|15921830|ref|NP_377499.1|	-	2.5e-12	46.8	0.0	3e-12	46.5	0.0	1.2	1	0	0	1	1	1	1	OsmC-like	protein
ATP-grasp_5	PF13549.1	gi|15921831|ref|NP_377500.1|	-	1.7e-49	168.0	0.9	3.8e-49	166.8	0.5	1.7	2	0	0	2	2	2	1	ATP-grasp	domain
Succ_CoA_lig	PF13607.1	gi|15921831|ref|NP_377500.1|	-	8.9e-49	164.6	0.1	2.2e-48	163.3	0.0	1.7	2	0	0	2	2	2	1	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding_2	PF13380.1	gi|15921831|ref|NP_377500.1|	-	7.5e-26	90.5	4.0	2.1e-25	89.1	0.4	2.9	3	1	0	3	3	3	1	CoA	binding	domain
CoA_binding	PF02629.14	gi|15921831|ref|NP_377500.1|	-	1.6e-17	63.7	1.0	6.9e-17	61.7	0.7	2.2	1	0	0	1	1	1	1	CoA	binding	domain
ATP-grasp_2	PF08442.5	gi|15921831|ref|NP_377500.1|	-	6.9e-06	25.5	0.4	0.00031	20.1	0.3	2.7	1	1	0	1	1	1	1	ATP-grasp	domain
RimK	PF08443.6	gi|15921831|ref|NP_377500.1|	-	2.3e-05	23.9	0.1	5.5e-05	22.7	0.0	1.6	1	0	0	1	1	1	1	RimK-like	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|15921831|ref|NP_377500.1|	-	0.00014	21.6	0.0	0.0003	20.5	0.0	1.5	1	0	0	1	1	1	1	ATP-grasp	domain
F420_oxidored	PF03807.12	gi|15921831|ref|NP_377500.1|	-	0.0018	18.6	3.5	0.068	13.6	0.1	3.8	4	0	0	4	4	4	1	NADP	oxidoreductase	coenzyme	F420-dependent
GFO_IDH_MocA	PF01408.17	gi|15921831|ref|NP_377500.1|	-	0.0018	18.7	1.8	0.07	13.6	0.0	3.4	4	0	0	4	4	4	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
GARS_A	PF01071.14	gi|15921831|ref|NP_377500.1|	-	0.0036	16.9	0.1	0.01	15.3	0.1	1.7	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
NAD_Gly3P_dh_N	PF01210.18	gi|15921831|ref|NP_377500.1|	-	0.01	15.5	0.8	0.035	13.8	0.1	2.2	2	0	0	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
ATP-grasp	PF02222.17	gi|15921831|ref|NP_377500.1|	-	0.033	13.5	1.9	0.061	12.6	0.1	2.3	3	0	0	3	3	3	0	ATP-grasp	domain
CPSase_L_D2	PF02786.12	gi|15921831|ref|NP_377500.1|	-	0.044	13.0	0.0	0.082	12.1	0.0	1.4	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Dala_Dala_lig_C	PF07478.8	gi|15921831|ref|NP_377500.1|	-	0.046	13.0	0.9	0.11	11.8	0.1	2.0	2	0	0	2	2	2	0	D-ala	D-ala	ligase	C-terminus
DUF981	PF06168.6	gi|15921832|ref|NP_377501.1|	-	8e-64	214.9	21.0	9.3e-64	214.7	14.5	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF981)
DUF2427	PF10348.4	gi|15921832|ref|NP_377501.1|	-	0.027	14.0	0.6	0.027	14.0	0.4	2.2	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF2427)
DUF4131	PF13567.1	gi|15921832|ref|NP_377501.1|	-	0.95	8.8	12.0	0.66	9.3	0.1	2.9	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF4131)
DUF202	PF02656.10	gi|15921832|ref|NP_377501.1|	-	2.8	8.2	15.3	0.51	10.5	0.3	3.3	3	2	0	3	3	3	0	Domain	of	unknown	function	(DUF202)
DUF3981	PF13139.1	gi|15921832|ref|NP_377501.1|	-	3.4	7.6	10.6	11	6.0	2.0	2.7	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF3981)
DUF308	PF03729.8	gi|15921832|ref|NP_377501.1|	-	7	6.7	26.5	21	5.2	3.0	4.1	1	1	2	3	3	3	0	Short	repeat	of	unknown	function	(DUF308)
DUF998	PF06197.8	gi|15921833|ref|NP_377502.1|	-	5e-30	104.1	18.7	5.6e-30	104.0	13.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF998)
DUF1304	PF06993.7	gi|15921833|ref|NP_377502.1|	-	5.3	6.8	16.0	8.1	6.2	0.3	2.8	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF1304)
DUF3185	PF11381.3	gi|15921834|ref|NP_377503.1|	-	1.6	8.5	8.8	9.1	6.1	0.9	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3185)
CHAD	PF05235.9	gi|15921835|ref|NP_377504.1|	-	0.067	12.7	0.2	0.093	12.3	0.1	1.3	1	0	0	1	1	1	0	CHAD	domain
Thymidylate_kin	PF02223.12	gi|15921836|ref|NP_377505.1|	-	0.00033	20.0	0.1	0.00063	19.1	0.0	1.5	1	1	0	1	1	1	1	Thymidylate	kinase
PcfJ	PF14284.1	gi|15921836|ref|NP_377505.1|	-	0.086	12.3	0.0	0.14	11.6	0.0	1.4	1	0	0	1	1	1	0	PcfJ-like	protein
Thymidylate_kin	PF02223.12	gi|15921837|ref|NP_377506.1|	-	4.7e-29	101.0	0.0	1.8e-28	99.1	0.0	1.7	1	1	0	1	1	1	1	Thymidylate	kinase
AAA_18	PF13238.1	gi|15921837|ref|NP_377506.1|	-	1.9e-05	24.9	0.2	8e-05	22.9	0.1	2.0	1	1	1	2	2	2	1	AAA	domain
dNK	PF01712.14	gi|15921837|ref|NP_377506.1|	-	0.0004	20.3	0.2	0.00082	19.2	0.1	1.6	1	1	0	1	1	1	1	Deoxynucleoside	kinase
AAA_17	PF13207.1	gi|15921837|ref|NP_377506.1|	-	0.07	13.9	0.8	0.87	10.4	0.5	2.5	1	1	0	1	1	1	0	AAA	domain
AAA_33	PF13671.1	gi|15921837|ref|NP_377506.1|	-	0.11	12.3	0.0	0.21	11.4	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
HemN_C	PF06969.11	gi|15921837|ref|NP_377506.1|	-	0.12	12.4	0.0	0.28	11.2	0.0	1.7	1	0	0	1	1	1	0	HemN	C-terminal	domain
Ppx-GppA	PF02541.11	gi|15921838|ref|NP_377507.1|	-	1.5e-43	149.0	0.1	2.8e-43	148.1	0.0	1.3	1	0	0	1	1	1	1	Ppx/GppA	phosphatase	family
DUF1700	PF08006.6	gi|15921839|ref|NP_377508.1|	-	0.58	9.4	3.1	0.77	9.0	2.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1700)
His_Phos_1	PF00300.17	gi|15921840|ref|NP_377509.1|	-	4.9e-15	55.9	0.0	8.6e-14	51.9	0.0	2.0	1	1	1	2	2	2	2	Histidine	phosphatase	superfamily	(branch	1)
Peptidase_M48	PF01435.13	gi|15921841|ref|NP_377510.1|	-	9.1e-21	74.4	0.0	2.5e-20	73.0	0.0	1.7	1	1	0	1	1	1	1	Peptidase	family	M48
Peptidase_M56	PF05569.6	gi|15921841|ref|NP_377510.1|	-	6.9e-06	25.2	0.2	1.3e-05	24.3	0.1	1.5	1	1	0	1	1	1	1	BlaR1	peptidase	M56
Gsf2	PF11055.3	gi|15921841|ref|NP_377510.1|	-	0.049	12.1	1.6	0.096	11.1	0.2	1.9	1	1	1	2	2	2	0	Glucose	signalling	factor	2
Lactamase_B	PF00753.22	gi|15921842|ref|NP_377511.1|	-	9.7e-22	77.5	0.0	1.2e-21	77.2	0.0	1.1	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|15921842|ref|NP_377511.1|	-	7.9e-06	25.5	0.0	8.8e-06	25.3	0.0	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|15921842|ref|NP_377511.1|	-	0.03	14.0	0.0	0.039	13.6	0.0	1.4	1	0	0	1	1	1	0	Beta-lactamase	superfamily	domain
Peptidase_U32	PF01136.14	gi|15921843|ref|NP_377512.1|	-	6e-27	94.0	0.0	1e-26	93.3	0.0	1.4	1	0	0	1	1	1	1	Peptidase	family	U32
NAGidase	PF07555.8	gi|15921843|ref|NP_377512.1|	-	0.0011	17.8	0.2	0.0015	17.4	0.1	1.3	1	0	0	1	1	1	1	beta-N-acetylglucosaminidase
PhoU	PF01895.14	gi|15921844|ref|NP_377513.1|	-	0.15	12.5	0.5	0.19	12.1	0.3	1.1	1	0	0	1	1	1	0	PhoU	domain
Ubie_methyltran	PF01209.13	gi|15921845|ref|NP_377514.1|	-	1.8e-21	76.3	0.5	3.1e-21	75.5	0.3	1.3	1	1	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_11	PF08241.7	gi|15921845|ref|NP_377514.1|	-	6.2e-12	45.8	0.0	9.7e-12	45.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|15921845|ref|NP_377514.1|	-	3.5e-07	29.9	0.0	1.5e-06	27.8	0.0	1.8	1	1	0	1	1	1	1	Methyltransferase	domain
MetW	PF07021.7	gi|15921845|ref|NP_377514.1|	-	1.9e-06	27.3	0.0	6.6e-06	25.6	0.0	1.8	1	1	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
Methyltransf_25	PF13649.1	gi|15921845|ref|NP_377514.1|	-	5.7e-06	26.6	0.0	1.6e-05	25.2	0.0	1.8	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|15921845|ref|NP_377514.1|	-	1.5e-05	24.7	0.0	2.4e-05	24.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|15921845|ref|NP_377514.1|	-	7.7e-05	23.1	0.0	0.00014	22.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|15921845|ref|NP_377514.1|	-	0.0036	17.8	0.0	0.014	15.9	0.0	1.9	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_8	PF05148.10	gi|15921845|ref|NP_377514.1|	-	0.014	15.0	0.0	0.021	14.4	0.0	1.4	1	0	0	1	1	1	0	Hypothetical	methyltransferase
DUF1423	PF07227.6	gi|15921845|ref|NP_377514.1|	-	0.13	10.9	0.0	0.3	9.7	0.0	1.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1423)
Nup35_RRM_2	PF14605.1	gi|15921846|ref|NP_377515.1|	-	0.23	11.2	1.3	0.93	9.3	0.0	2.5	3	0	0	3	3	3	0	Nup53/35/40-type	RNA	recognition	motif
DUF3216	PF11505.3	gi|15921847|ref|NP_377516.1|	-	0.057	13.2	0.0	0.12	12.1	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3216)
MarR_2	PF12802.2	gi|15921848|ref|NP_377517.1|	-	0.00023	20.7	0.0	0.0004	19.9	0.0	1.3	1	0	0	1	1	1	1	MarR	family
Peptidase_S24	PF00717.18	gi|15921849|ref|NP_377518.1|	-	0.0011	18.6	0.0	0.0018	17.8	0.0	1.4	1	0	0	1	1	1	1	Peptidase	S24-like
OppC_N	PF12911.2	gi|15921849|ref|NP_377518.1|	-	7.3	6.0	12.1	0.62	9.4	0.2	3.6	3	0	0	3	3	3	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
HTH_45	PF14947.1	gi|15921853|ref|NP_377522.1|	-	2.4e-23	81.7	1.8	2.4e-23	81.7	1.3	1.6	2	0	0	2	2	2	1	Winged	helix-turn-helix
DUF4364	PF14277.1	gi|15921853|ref|NP_377522.1|	-	0.0082	15.7	2.1	0.01	15.4	1.4	1.3	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
LAGLIDADG_WhiA	PF14527.1	gi|15921853|ref|NP_377522.1|	-	0.13	12.1	1.4	0.19	11.6	0.9	1.5	1	1	0	1	1	1	0	WhiA	LAGLIDADG-like	domain
DUF4231	PF14015.1	gi|15921855|ref|NP_377524.1|	-	0.078	12.9	2.0	0.99	9.4	0.1	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4231)
Fig1	PF12351.3	gi|15921855|ref|NP_377524.1|	-	0.15	11.8	7.9	0.62	9.9	0.2	2.1	2	0	0	2	2	2	0	Ca2+	regulator	and	membrane	fusion	protein	Fig1
Pex24p	PF06398.6	gi|15921855|ref|NP_377524.1|	-	0.22	10.2	9.5	0.4	9.4	6.6	1.4	1	1	0	1	1	1	0	Integral	peroxisomal	membrane	peroxin
Baculo_11_kDa	PF06143.6	gi|15921855|ref|NP_377524.1|	-	0.39	10.1	5.3	4.7	6.6	1.1	2.6	2	0	0	2	2	2	0	Baculovirus	11	kDa	family
SUR7	PF06687.7	gi|15921855|ref|NP_377524.1|	-	1.6	8.2	13.3	0.22	11.0	1.3	2.1	2	0	0	2	2	2	0	SUR7/PalI	family
DUF4131	PF13567.1	gi|15921855|ref|NP_377524.1|	-	2.2	7.6	8.0	3.5	6.9	0.4	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4131)
Sulfate_transp	PF00916.15	gi|15921855|ref|NP_377524.1|	-	5	6.0	9.8	0.84	8.5	1.2	2.1	1	1	1	2	2	2	0	Sulfate	transporter	family
PaREP1	PF05942.6	gi|15921856|ref|NP_377525.1|	-	9.5e-29	99.5	0.7	1.3e-28	99.1	0.5	1.3	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
INTS5_N	PF14837.1	gi|15921856|ref|NP_377525.1|	-	0.075	12.4	0.0	0.1	11.9	0.0	1.3	1	0	0	1	1	1	0	Integrator	complex	subunit	5	N-terminus
HEPN	PF05168.9	gi|15921856|ref|NP_377525.1|	-	0.09	12.6	3.9	9.1	6.2	2.7	2.2	1	1	0	1	1	1	0	HEPN	domain
HTH_45	PF14947.1	gi|15921859|ref|NP_377528.1|	-	9.7e-22	76.5	2.0	1.4e-21	76.1	1.4	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix
DUF4364	PF14277.1	gi|15921859|ref|NP_377528.1|	-	0.00019	21.1	0.9	0.00019	21.1	0.6	1.6	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
GRASP55_65	PF04495.9	gi|15921859|ref|NP_377528.1|	-	0.0041	17.1	0.0	0.0048	16.8	0.0	1.1	1	0	0	1	1	1	1	GRASP55/65	PDZ-like	domain
HTH_24	PF13412.1	gi|15921859|ref|NP_377528.1|	-	0.0065	15.8	0.7	0.014	14.8	0.0	1.8	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
Mrr_N	PF14338.1	gi|15921859|ref|NP_377528.1|	-	0.033	14.2	0.2	0.37	10.9	0.1	2.5	1	1	2	3	3	3	0	Mrr	N-terminal	domain
HTH_27	PF13463.1	gi|15921859|ref|NP_377528.1|	-	0.055	13.7	0.1	0.12	12.7	0.0	1.6	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
Med30	PF11315.3	gi|15921859|ref|NP_377528.1|	-	0.072	13.2	0.8	0.084	13.0	0.5	1.2	1	0	0	1	1	1	0	Mediator	complex	subunit	30
Mor	PF08765.6	gi|15921859|ref|NP_377528.1|	-	0.084	12.6	0.1	0.16	11.7	0.0	1.4	1	0	0	1	1	1	0	Mor	transcription	activator	family
Transp_cyt_pur	PF02133.10	gi|15921861|ref|NP_377530.1|	-	2.1e-61	207.8	48.6	3.2e-61	207.2	33.2	2.1	1	1	0	1	1	1	1	Permease	for	cytosine/purines,	uracil,	thiamine,	allantoin
DUF4652	PF15525.1	gi|15921861|ref|NP_377530.1|	-	0.15	11.4	0.1	0.23	10.8	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4652)
UPF0016	PF01169.14	gi|15921861|ref|NP_377530.1|	-	0.5	10.5	13.9	1.1	9.4	0.5	3.8	3	0	0	3	3	3	0	Uncharacterized	protein	family	UPF0016
Pkinase	PF00069.20	gi|15921862|ref|NP_377531.1|	-	1.5e-27	96.3	0.0	2.6e-27	95.6	0.0	1.3	1	0	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|15921862|ref|NP_377531.1|	-	7.6e-10	38.2	0.0	3.4e-09	36.1	0.0	2.0	1	1	0	1	1	1	1	Protein	tyrosine	kinase
DUF973	PF06157.6	gi|15921863|ref|NP_377532.1|	-	1.8e-68	230.5	36.5	4.5e-68	229.2	25.3	1.5	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
DUF996	PF06195.8	gi|15921863|ref|NP_377532.1|	-	1.5e-05	24.9	20.3	0.0034	17.3	8.5	2.6	1	1	2	3	3	3	3	Protein	of	unknown	function	(DUF996)
DUF3098	PF11297.3	gi|15921863|ref|NP_377532.1|	-	0.05	13.3	5.3	0.15	11.8	3.2	2.2	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3098)
PALP	PF00291.20	gi|161751092|ref|NP_377533.2|	-	1.2e-32	113.3	0.0	1.5e-32	113.0	0.0	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
CP_ATPgrasp_1	PF04174.8	gi|15921865|ref|NP_377534.1|	-	2.1e-100	335.5	0.0	2.5e-100	335.3	0.0	1.1	1	0	0	1	1	1	1	A	circularly	permuted	ATPgrasp
CP_ATPgrasp_2	PF14403.1	gi|15921865|ref|NP_377534.1|	-	1.3e-07	30.6	0.0	1.1e-06	27.6	0.0	2.0	1	1	0	1	1	1	1	Circularly	permuted	ATP-grasp	type	2
ATPgrasp_ST	PF14397.1	gi|15921865|ref|NP_377534.1|	-	0.0024	17.0	0.0	0.0046	16.0	0.0	1.4	1	0	0	1	1	1	1	Sugar-transfer	associated	ATP-grasp
ATP-grasp_3	PF02655.9	gi|15921865|ref|NP_377534.1|	-	0.0046	16.8	0.1	0.32	10.8	0.0	2.3	2	0	0	2	2	2	1	ATP-grasp	domain
GSH-S_ATP	PF02955.11	gi|15921865|ref|NP_377534.1|	-	0.043	12.9	0.1	0.11	11.6	0.0	1.6	1	0	0	1	1	1	0	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
ATP-grasp	PF02222.17	gi|15921865|ref|NP_377534.1|	-	0.089	12.1	0.0	0.15	11.3	0.0	1.3	1	0	0	1	1	1	0	ATP-grasp	domain
ATPgrasp_YheCD	PF14398.1	gi|15921865|ref|NP_377534.1|	-	0.17	10.6	0.1	5.9	5.6	0.0	2.3	2	0	0	2	2	2	0	YheC/D	like	ATP-grasp
Transglut_core	PF01841.14	gi|15921866|ref|NP_377535.1|	-	3.7e-23	81.8	0.0	6e-23	81.2	0.0	1.3	1	0	0	1	1	1	1	Transglutaminase-like	superfamily
Bact_transglu_N	PF08379.5	gi|15921866|ref|NP_377535.1|	-	3.2e-14	52.9	0.2	5e-14	52.3	0.2	1.3	1	0	0	1	1	1	1	Bacterial	transglutaminase-like	N-terminal	region
DUF553	PF04473.7	gi|15921866|ref|NP_377535.1|	-	1.1e-06	27.9	0.0	6.4e-06	25.5	0.0	1.9	1	1	0	1	1	1	1	Transglutaminase-like	domain
Transglut_core3	PF13471.1	gi|15921866|ref|NP_377535.1|	-	1e-05	25.2	0.0	1.5e-05	24.7	0.0	1.3	1	0	0	1	1	1	1	Transglutaminase-like	superfamily
Peptidase_C93	PF06035.6	gi|15921866|ref|NP_377535.1|	-	0.025	13.9	0.0	0.039	13.3	0.0	1.2	1	0	0	1	1	1	0	Bacterial	transglutaminase-like	cysteine	proteinase	BTLCP
DNA_binding_1	PF01035.15	gi|15921866|ref|NP_377535.1|	-	0.12	12.1	0.1	6	6.6	0.0	2.5	2	0	0	2	2	2	0	6-O-methylguanine	DNA	methyltransferase,	DNA	binding	domain
Alpha-E	PF04168.7	gi|15921867|ref|NP_377536.1|	-	8.8e-06	25.3	0.2	1.6e-05	24.4	0.1	1.5	1	1	1	2	2	2	1	A	predicted	alpha-helical	domain	with	a	conserved	ER	motif.
Ald_Xan_dh_C2	PF02738.13	gi|15921868|ref|NP_377537.1|	-	4.8e-108	361.8	0.0	6.9e-108	361.3	0.0	1.2	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|15921868|ref|NP_377537.1|	-	8.1e-26	90.2	0.0	1.3e-25	89.5	0.0	1.3	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
Antitoxin-MazE	PF04014.13	gi|15921869|ref|NP_377538.1|	-	1.4e-11	43.8	0.3	2e-11	43.3	0.2	1.4	1	1	0	1	1	1	1	Antidote-toxin	recognition	MazE
TOBE	PF03459.12	gi|15921869|ref|NP_377538.1|	-	0.0028	17.7	0.0	0.0064	16.5	0.0	1.6	1	1	0	1	1	1	1	TOBE	domain
UFD1	PF03152.9	gi|15921869|ref|NP_377538.1|	-	0.045	12.8	0.0	0.049	12.7	0.0	1.1	1	0	0	1	1	1	0	Ubiquitin	fusion	degradation	protein	UFD1
Ste50p-SAM	PF09235.5	gi|15921869|ref|NP_377538.1|	-	0.084	12.9	0.2	0.25	11.4	0.1	1.8	1	1	0	1	1	1	0	Ste50p,	sterile	alpha	motif
PduL	PF06130.7	gi|15921869|ref|NP_377538.1|	-	0.12	12.2	0.0	0.17	11.6	0.0	1.4	1	1	0	1	1	1	0	Propanediol	utilisation	protein	PduL
DUF104	PF01954.11	gi|15921869|ref|NP_377538.1|	-	3.9	7.5	7.8	3.6	7.6	2.2	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	DUF104
PIN	PF01850.16	gi|15921870|ref|NP_377539.1|	-	3.8e-10	40.1	1.5	5.1e-10	39.7	1.1	1.2	1	0	0	1	1	1	1	PIN	domain
NTP_transf_2	PF01909.18	gi|15921871|ref|NP_377540.1|	-	4.3e-12	46.1	2.1	6.5e-12	45.6	1.5	1.3	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
DUF294	PF03445.8	gi|15921871|ref|NP_377540.1|	-	0.043	13.4	0.0	0.048	13.2	0.0	1.2	1	0	0	1	1	1	0	Putative	nucleotidyltransferase	DUF294
DNA_pol_B_palm	PF14792.1	gi|15921871|ref|NP_377540.1|	-	0.1	12.6	0.0	0.3	11.1	0.0	1.7	1	1	0	1	1	1	0	DNA	polymerase	beta	palm
HEPN	PF05168.9	gi|15921872|ref|NP_377541.1|	-	2e-32	111.5	1.0	2.4e-32	111.3	0.7	1.0	1	0	0	1	1	1	1	HEPN	domain
FB_lectin	PF07367.6	gi|15921872|ref|NP_377541.1|	-	0.038	13.5	0.1	0.056	13.0	0.0	1.3	1	0	0	1	1	1	0	Fungal	fruit	body	lectin
DUF2122	PF09895.4	gi|15921872|ref|NP_377541.1|	-	0.045	13.9	0.1	0.29	11.3	0.0	2.1	1	1	2	3	3	3	0	RecB-family	nuclease	(DUF2122)
TIR_2	PF13676.1	gi|15921872|ref|NP_377541.1|	-	0.098	12.8	0.3	1.1	9.5	0.1	2.5	1	1	1	2	2	2	0	TIR	domain
E2F_TDP	PF02319.15	gi|15921873|ref|NP_377542.1|	-	0.0046	16.5	0.8	0.015	14.8	0.1	2.0	2	1	0	2	2	2	1	E2F/DP	family	winged-helix	DNA-binding	domain
AAA_31	PF13614.1	gi|15921873|ref|NP_377542.1|	-	0.029	14.3	0.3	0.053	13.4	0.2	1.4	1	1	0	1	1	1	0	AAA	domain
EB1	PF03271.12	gi|15921873|ref|NP_377542.1|	-	0.053	13.5	2.8	1	9.4	1.9	2.4	1	1	0	1	1	1	0	EB1-like	C-terminal	motif
AAA_21	PF13304.1	gi|15921874|ref|NP_377543.1|	-	2.3e-22	80.2	17.3	4.6e-22	79.3	12.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|15921874|ref|NP_377543.1|	-	1.8e-12	47.0	15.7	1.2e-07	31.1	10.9	2.8	1	1	0	1	1	1	1	AAA	ATPase	domain
DUF2813	PF11398.3	gi|15921874|ref|NP_377543.1|	-	6.4e-06	25.4	0.7	0.00087	18.4	0.2	2.5	2	1	0	2	2	2	2	Protein	of	unknown	function	(DUF2813)
AAA_23	PF13476.1	gi|15921874|ref|NP_377543.1|	-	3.3e-05	24.3	9.5	3.3e-05	24.3	6.6	1.9	2	1	0	2	2	2	1	AAA	domain
DUF3696	PF12476.3	gi|15921874|ref|NP_377543.1|	-	0.054	13.4	0.7	3.2	7.7	0.0	3.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3696)
ABC_tran	PF00005.22	gi|15921875|ref|NP_377544.1|	-	3.4e-33	114.8	0.0	5.9e-33	114.0	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|15921875|ref|NP_377544.1|	-	1.2e-14	54.9	1.6	6.9e-13	49.2	1.1	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|15921875|ref|NP_377544.1|	-	7.1e-05	22.2	0.0	0.00013	21.4	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.1	gi|15921875|ref|NP_377544.1|	-	0.0004	19.5	1.3	0.012	14.6	0.2	2.1	1	1	1	2	2	2	1	AAA	ATPase	domain
SMC_N	PF02463.14	gi|15921875|ref|NP_377544.1|	-	0.0011	18.2	1.2	0.02	14.1	0.9	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|15921875|ref|NP_377544.1|	-	0.0063	16.8	0.4	0.014	15.7	0.1	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|15921875|ref|NP_377544.1|	-	0.0098	15.3	0.1	0.014	14.8	0.1	1.5	1	1	0	1	1	1	1	AAA-like	domain
MukB	PF04310.7	gi|15921875|ref|NP_377544.1|	-	0.01	15.1	0.0	0.22	10.8	0.0	2.1	1	1	1	2	2	2	0	MukB	N-terminal
Mg_chelatase	PF01078.16	gi|15921875|ref|NP_377544.1|	-	0.015	14.4	0.1	0.88	8.6	0.0	2.2	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
Fer4_NifH	PF00142.13	gi|15921875|ref|NP_377544.1|	-	0.015	14.4	0.0	0.032	13.4	0.0	1.5	2	0	0	2	2	2	0	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
DUF87	PF01935.12	gi|15921875|ref|NP_377544.1|	-	0.022	14.5	0.3	0.069	12.9	0.0	1.8	2	1	0	2	2	2	0	Domain	of	unknown	function	DUF87
AAA_17	PF13207.1	gi|15921875|ref|NP_377544.1|	-	0.023	15.5	0.4	0.16	12.8	0.3	2.1	2	1	0	2	2	2	0	AAA	domain
SRP54	PF00448.17	gi|15921875|ref|NP_377544.1|	-	0.026	13.9	0.0	0.065	12.6	0.0	1.7	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
AAA_19	PF13245.1	gi|15921875|ref|NP_377544.1|	-	0.027	14.2	0.1	0.068	12.9	0.0	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_30	PF13604.1	gi|15921875|ref|NP_377544.1|	-	0.027	14.0	0.0	0.048	13.2	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
MutS_V	PF00488.16	gi|15921875|ref|NP_377544.1|	-	0.041	13.2	0.1	2	7.7	0.0	2.1	2	0	0	2	2	2	0	MutS	domain	V
ArgK	PF03308.11	gi|15921875|ref|NP_377544.1|	-	0.042	12.6	0.2	0.078	11.7	0.1	1.4	1	0	0	1	1	1	0	ArgK	protein
AAA_22	PF13401.1	gi|15921875|ref|NP_377544.1|	-	0.13	12.4	0.2	0.37	10.9	0.1	1.8	1	1	0	1	1	1	0	AAA	domain
AAA_25	PF13481.1	gi|15921875|ref|NP_377544.1|	-	0.13	11.6	0.0	0.18	11.1	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
DUF258	PF03193.11	gi|15921875|ref|NP_377544.1|	-	0.14	11.3	0.0	0.26	10.4	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
NACHT	PF05729.7	gi|15921875|ref|NP_377544.1|	-	0.16	11.6	0.3	1.7	8.2	0.0	2.1	2	0	0	2	2	2	0	NACHT	domain
Ibs_toxin	PF13956.1	gi|15921877|ref|NP_377546.1|	-	0.041	13.6	4.4	0.12	12.1	3.0	1.8	1	0	0	1	1	1	0	Toxin	Ibs,	type	I	toxin-antitoxin	system
TadE	PF07811.7	gi|15921877|ref|NP_377546.1|	-	0.11	12.4	1.3	0.18	11.6	0.9	1.4	1	0	0	1	1	1	0	TadE-like	protein
Amidohydro_1	PF01979.15	gi|15921878|ref|NP_377547.1|	-	5.4e-43	147.9	0.0	7.2e-43	147.4	0.0	1.2	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|15921878|ref|NP_377547.1|	-	7e-18	65.6	0.0	4.6e-16	59.6	0.0	2.4	1	1	0	1	1	1	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|15921878|ref|NP_377547.1|	-	1.3e-10	41.0	0.2	4.9e-07	29.3	0.0	2.8	2	2	1	3	3	3	2	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|15921878|ref|NP_377547.1|	-	1.8e-10	40.4	1.4	2e-10	40.3	0.1	1.8	2	0	0	2	2	2	1	Amidohydrolase
ABC_tran	PF00005.22	gi|15921880|ref|NP_377549.1|	-	3.7e-33	114.7	0.0	5.4e-33	114.1	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|15921880|ref|NP_377549.1|	-	4.2e-15	56.4	3.5	1e-13	51.9	0.8	2.5	2	1	0	2	2	2	1	AAA	domain
AAA_15	PF13175.1	gi|15921880|ref|NP_377549.1|	-	8.7e-07	28.3	0.1	0.032	13.3	0.0	2.4	1	1	0	2	2	2	2	AAA	ATPase	domain
Arch_ATPase	PF01637.13	gi|15921880|ref|NP_377549.1|	-	8.2e-05	22.4	0.7	0.00018	21.2	0.2	2.0	1	1	0	1	1	1	1	Archaeal	ATPase
UPF0079	PF02367.12	gi|15921880|ref|NP_377549.1|	-	0.00017	21.2	0.0	0.00039	20.0	0.0	1.5	1	0	0	1	1	1	1	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_14	PF13173.1	gi|15921880|ref|NP_377549.1|	-	0.00019	21.3	0.2	0.0037	17.1	0.1	2.4	1	1	1	2	2	2	1	AAA	domain
IstB_IS21	PF01695.12	gi|15921880|ref|NP_377549.1|	-	0.00019	20.8	0.0	0.63	9.4	0.0	2.5	2	1	0	2	2	2	2	IstB-like	ATP	binding	protein
SMC_N	PF02463.14	gi|15921880|ref|NP_377549.1|	-	0.00038	19.7	0.1	0.086	12.0	0.1	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_16	PF13191.1	gi|15921880|ref|NP_377549.1|	-	0.00059	19.8	0.0	0.0017	18.4	0.0	1.8	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA	PF00004.24	gi|15921880|ref|NP_377549.1|	-	0.00086	19.5	0.2	0.0021	18.2	0.1	1.9	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_23	PF13476.1	gi|15921880|ref|NP_377549.1|	-	0.0009	19.6	1.8	0.0019	18.5	1.2	1.7	1	1	0	1	1	1	1	AAA	domain
NB-ARC	PF00931.17	gi|15921880|ref|NP_377549.1|	-	0.002	17.0	0.3	0.0033	16.3	0.2	1.7	1	1	0	1	1	1	1	NB-ARC	domain
AAA_29	PF13555.1	gi|15921880|ref|NP_377549.1|	-	0.002	17.5	0.0	0.0038	16.7	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_5	PF07728.9	gi|15921880|ref|NP_377549.1|	-	0.0024	17.6	0.1	0.0069	16.1	0.1	2.0	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_25	PF13481.1	gi|15921880|ref|NP_377549.1|	-	0.0029	17.0	0.0	0.012	15.0	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|15921880|ref|NP_377549.1|	-	0.0042	16.2	0.0	0.007	15.5	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_22	PF13401.1	gi|15921880|ref|NP_377549.1|	-	0.0076	16.3	0.8	0.17	12.0	0.0	2.6	2	1	0	2	2	2	1	AAA	domain
SbcCD_C	PF13558.1	gi|15921880|ref|NP_377549.1|	-	0.011	15.6	0.0	0.036	13.9	0.0	2.0	2	1	0	2	2	1	0	Putative	exonuclease	SbcCD,	C	subunit
Miro	PF08477.8	gi|15921880|ref|NP_377549.1|	-	0.013	15.9	0.1	0.031	14.7	0.0	1.7	2	0	0	2	2	1	0	Miro-like	protein
NTPase_1	PF03266.10	gi|15921880|ref|NP_377549.1|	-	0.015	15.0	0.4	0.47	10.1	0.1	2.4	2	0	0	2	2	2	0	NTPase
AAA_33	PF13671.1	gi|15921880|ref|NP_377549.1|	-	0.017	15.0	0.1	0.037	13.9	0.0	1.8	1	1	0	1	1	1	0	AAA	domain
NACHT	PF05729.7	gi|15921880|ref|NP_377549.1|	-	0.024	14.2	0.1	0.06	13.0	0.0	1.7	2	0	0	2	2	2	0	NACHT	domain
AAA_19	PF13245.1	gi|15921880|ref|NP_377549.1|	-	0.045	13.5	0.0	0.17	11.6	0.0	1.9	2	0	0	2	2	2	0	Part	of	AAA	domain
AAA_10	PF12846.2	gi|15921880|ref|NP_377549.1|	-	0.089	12.2	0.1	0.55	9.6	0.0	2.0	2	0	0	2	2	2	0	AAA-like	domain
PduV-EutP	PF10662.4	gi|15921880|ref|NP_377549.1|	-	0.12	11.9	0.1	0.19	11.2	0.0	1.4	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
ABC2_membrane	PF01061.19	gi|15921881|ref|NP_377550.1|	-	2.3e-11	43.2	32.6	3.3e-11	42.7	22.6	1.3	1	0	0	1	1	1	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.2	gi|15921881|ref|NP_377550.1|	-	1.9e-09	37.0	33.8	1.9e-09	37.0	23.4	1.9	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|15921881|ref|NP_377550.1|	-	0.043	12.9	42.5	0.051	12.7	29.5	1.1	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
HTH_34	PF13601.1	gi|15921882|ref|NP_377551.1|	-	4.5e-06	26.6	0.0	8.7e-06	25.6	0.0	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_5	PF01022.15	gi|15921882|ref|NP_377551.1|	-	9.9e-06	25.1	0.0	2.3e-05	23.9	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.1	gi|15921882|ref|NP_377551.1|	-	3.3e-05	23.1	0.0	0.0001	21.5	0.0	1.9	1	1	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.17	gi|15921882|ref|NP_377551.1|	-	0.00036	20.1	0.0	0.00074	19.1	0.0	1.5	1	0	0	1	1	1	1	MarR	family
Fe_dep_repress	PF01325.14	gi|15921882|ref|NP_377551.1|	-	0.00052	19.8	0.0	0.0011	18.8	0.0	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
MarR_2	PF12802.2	gi|15921882|ref|NP_377551.1|	-	0.0012	18.4	0.0	0.0024	17.5	0.0	1.4	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|15921882|ref|NP_377551.1|	-	0.0016	18.0	0.0	0.0033	17.1	0.0	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_27	PF13463.1	gi|15921882|ref|NP_377551.1|	-	0.0055	17.0	0.0	0.018	15.3	0.0	1.9	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
DUF1670	PF07900.6	gi|15921882|ref|NP_377551.1|	-	0.027	13.7	0.0	0.052	12.7	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1670)
TFIIE_alpha	PF02002.12	gi|15921882|ref|NP_377551.1|	-	0.051	13.0	0.0	7.6	6.0	0.0	2.3	2	0	0	2	2	2	0	TFIIE	alpha	subunit
Penicillinase_R	PF03965.11	gi|15921882|ref|NP_377551.1|	-	0.057	13.5	0.0	0.55	10.3	0.0	2.1	2	0	0	2	2	2	0	Penicillinase	repressor
HTH_11	PF08279.7	gi|15921882|ref|NP_377551.1|	-	0.088	12.4	0.0	0.2	11.3	0.0	1.6	1	0	0	1	1	1	0	HTH	domain
FeoC	PF09012.5	gi|15921882|ref|NP_377551.1|	-	0.12	12.1	0.0	0.19	11.4	0.0	1.3	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
Lactamase_B	PF00753.22	gi|15921883|ref|NP_377552.1|	-	1e-21	77.4	0.5	1.6e-21	76.8	0.3	1.3	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|15921883|ref|NP_377552.1|	-	8.3e-08	32.0	0.0	1.1e-07	31.6	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
DUF1059	PF06348.6	gi|15921884|ref|NP_377553.1|	-	6.1e-55	182.8	0.2	3.3e-27	94.0	0.0	2.0	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF1059)
Arc	PF03869.9	gi|15921884|ref|NP_377553.1|	-	0.034	13.7	0.0	0.066	12.8	0.0	1.5	1	0	0	1	1	1	0	Arc-like	DNA	binding	domain
Como_SCP	PF02248.11	gi|15921884|ref|NP_377553.1|	-	0.054	12.8	0.0	3.1	7.1	0.0	2.0	1	1	1	2	2	2	0	Small	coat	protein
Zn-ribbon_8	PF09723.5	gi|15921884|ref|NP_377553.1|	-	0.16	11.9	0.4	3.3	7.7	0.0	2.3	2	0	0	2	2	2	0	Zinc	ribbon	domain
Fer2_3	PF13085.1	gi|15921884|ref|NP_377553.1|	-	0.21	11.4	0.7	0.39	10.5	0.1	1.9	1	1	1	2	2	2	0	2Fe-2S	iron-sulfur	cluster	binding	domain
PqqA	PF08042.6	gi|15921884|ref|NP_377553.1|	-	0.67	9.6	2.2	25	4.6	0.1	2.3	2	0	0	2	2	2	0	PqqA	family
LrgB	PF04172.11	gi|15921885|ref|NP_377554.1|	-	0.15	11.2	0.3	0.15	11.1	0.2	1.0	1	0	0	1	1	1	0	LrgB-like	family
FixQ	PF05545.6	gi|15921885|ref|NP_377554.1|	-	2.1	8.0	4.0	7.1	6.3	0.1	2.2	2	0	0	2	2	2	0	Cbb3-type	cytochrome	oxidase	component	FixQ
HTH_24	PF13412.1	gi|15921886|ref|NP_377555.1|	-	1.2e-25	88.6	0.6	2.1e-14	52.5	0.0	2.3	2	0	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|15921886|ref|NP_377555.1|	-	3.6e-17	61.6	0.1	7.8e-09	34.9	0.0	2.3	2	0	0	2	2	2	2	AsnC-type	helix-turn-helix	domain
MarR_2	PF12802.2	gi|15921886|ref|NP_377555.1|	-	9.5e-08	31.6	0.0	0.00082	18.9	0.0	2.2	2	0	0	2	2	2	2	MarR	family
HTH_Crp_2	PF13545.1	gi|15921886|ref|NP_377555.1|	-	4.8e-06	26.2	0.0	0.09	12.5	0.0	2.4	2	0	0	2	2	2	2	Crp-like	helix-turn-helix	domain
MarR	PF01047.17	gi|15921886|ref|NP_377555.1|	-	5.2e-06	26.0	0.0	0.047	13.3	0.0	2.3	2	0	0	2	2	2	2	MarR	family
HTH_11	PF08279.7	gi|15921886|ref|NP_377555.1|	-	5.6e-06	25.8	0.0	0.00038	20.0	0.0	2.5	2	0	0	2	2	2	1	HTH	domain
HTH_20	PF12840.2	gi|15921886|ref|NP_377555.1|	-	6.9e-06	25.7	0.0	0.048	13.4	0.0	2.3	2	0	0	2	2	2	2	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|15921886|ref|NP_377555.1|	-	1.2e-05	24.8	0.0	0.18	11.4	0.0	2.4	2	0	0	2	2	2	2	Bacterial	regulatory	protein,	arsR	family
HTH_23	PF13384.1	gi|15921886|ref|NP_377555.1|	-	7.1e-05	22.3	0.0	0.093	12.4	0.0	2.6	2	0	0	2	2	2	2	Homeodomain-like	domain
HTH_28	PF13518.1	gi|15921886|ref|NP_377555.1|	-	0.0025	17.7	0.0	0.1	12.6	0.0	2.3	2	0	0	2	2	2	1	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|15921886|ref|NP_377555.1|	-	0.0029	17.6	0.0	0.084	13.0	0.0	2.2	2	0	0	2	2	2	1	Transcriptional	regulator
Sigma70_r4_2	PF08281.7	gi|15921886|ref|NP_377555.1|	-	0.0029	17.0	0.0	2.2	7.7	0.0	2.5	2	0	0	2	2	2	2	Sigma-70,	region	4
HTH_10	PF04967.7	gi|15921886|ref|NP_377555.1|	-	0.003	17.1	0.0	1.2	8.7	0.0	2.4	2	0	0	2	2	2	1	HTH	DNA	binding	domain
HTH_27	PF13463.1	gi|15921886|ref|NP_377555.1|	-	0.0031	17.8	0.0	1.4	9.3	0.0	2.3	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_Mga	PF08280.6	gi|15921886|ref|NP_377555.1|	-	0.0082	15.8	0.0	1.5	8.6	0.0	2.5	2	0	0	2	2	2	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_34	PF13601.1	gi|15921886|ref|NP_377555.1|	-	0.0089	16.0	0.0	4.1	7.5	0.0	2.4	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|15921886|ref|NP_377555.1|	-	0.012	15.2	0.0	1	9.1	0.0	2.3	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
LexA_DNA_bind	PF01726.11	gi|15921886|ref|NP_377555.1|	-	0.012	15.1	0.0	2.2	7.9	0.0	2.3	2	0	0	2	2	2	0	LexA	DNA	binding	domain
Fe_dep_repress	PF01325.14	gi|15921886|ref|NP_377555.1|	-	0.03	14.2	0.0	12	5.9	0.0	2.4	2	0	0	2	2	2	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
B-block_TFIIIC	PF04182.7	gi|15921886|ref|NP_377555.1|	-	0.048	13.5	1.3	5.1	7.0	0.0	3.2	3	1	0	3	3	3	0	B-block	binding	subunit	of	TFIIIC
Phage_terminase	PF10668.4	gi|15921886|ref|NP_377555.1|	-	0.054	13.2	0.0	0.64	9.8	0.0	2.3	2	0	0	2	2	2	0	Phage	terminase	small	subunit
HTH_8	PF02954.14	gi|15921886|ref|NP_377555.1|	-	0.054	13.0	0.1	0.14	11.7	0.0	1.8	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	Fis	family
HTH_38	PF13936.1	gi|15921886|ref|NP_377555.1|	-	0.079	12.5	0.0	6.9	6.3	0.0	2.5	2	0	0	2	2	2	0	Helix-turn-helix	domain
TetR_N	PF00440.18	gi|15921886|ref|NP_377555.1|	-	0.1	12.2	0.0	1	9.0	0.0	2.3	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	tetR	family
DUF929	PF06053.6	gi|15921888|ref|NP_377557.1|	-	3e-62	209.9	15.7	4.2e-62	209.4	10.9	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF929)
Thioredoxin_7	PF13899.1	gi|15921888|ref|NP_377557.1|	-	0.0065	16.4	0.0	0.017	15.1	0.0	1.6	1	0	0	1	1	1	1	Thioredoxin-like
Thioredoxin_2	PF13098.1	gi|15921888|ref|NP_377557.1|	-	0.033	14.3	1.7	0.071	13.3	0.0	2.2	3	0	0	3	3	3	0	Thioredoxin-like	domain
Redoxin	PF08534.5	gi|15921888|ref|NP_377557.1|	-	0.05	13.1	0.0	0.085	12.3	0.0	1.3	1	0	0	1	1	1	0	Redoxin
AhpC-TSA	PF00578.16	gi|15921888|ref|NP_377557.1|	-	0.07	12.8	0.0	0.11	12.1	0.0	1.3	1	0	0	1	1	1	0	AhpC/TSA	family
SoxE	PF06525.6	gi|15921889|ref|NP_377558.1|	-	0.037	13.2	19.3	0.034	13.4	10.1	2.5	3	0	0	3	3	3	0	Sulfocyanin	(SoxE)
Sporozoite_P67	PF05642.6	gi|15921889|ref|NP_377558.1|	-	0.054	11.3	5.8	1.6	6.4	3.1	2.1	2	0	0	2	2	2	0	Sporozoite	P67	surface	antigen
DUF677	PF05055.7	gi|15921889|ref|NP_377558.1|	-	0.8	8.3	6.8	1.1	7.8	4.7	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF677)
Mucin	PF01456.12	gi|15921889|ref|NP_377558.1|	-	4.4	7.0	25.1	10	5.8	17.4	1.6	1	0	0	1	1	1	0	Mucin-like	glycoprotein
Fer4_10	PF13237.1	gi|15921890|ref|NP_377559.1|	-	1.8e-07	30.8	5.6	3.4e-07	29.9	3.9	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|15921890|ref|NP_377559.1|	-	1.7e-06	28.1	6.3	7.1e-06	26.1	4.6	1.9	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|15921890|ref|NP_377559.1|	-	1.5e-05	25.2	9.1	0.011	16.1	0.2	2.4	1	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_11	PF13247.1	gi|15921890|ref|NP_377559.1|	-	0.00023	20.9	1.5	0.00048	19.9	1.1	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|15921890|ref|NP_377559.1|	-	0.0019	18.9	2.9	0.26	12.0	0.0	2.5	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.2	gi|15921890|ref|NP_377559.1|	-	0.0054	16.5	8.2	0.25	11.3	1.9	2.8	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|15921890|ref|NP_377559.1|	-	0.0056	16.6	5.7	0.0056	16.6	3.9	2.6	2	2	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|15921890|ref|NP_377559.1|	-	0.014	15.2	11.5	0.57	10.1	1.1	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|15921890|ref|NP_377559.1|	-	0.052	13.9	6.9	1.1	9.6	0.2	2.6	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_20	PF14691.1	gi|15921890|ref|NP_377559.1|	-	0.13	11.9	5.9	0.1	12.1	1.9	2.1	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_21	PF14697.1	gi|15921890|ref|NP_377559.1|	-	0.22	11.3	7.0	0.6	10.0	4.8	1.8	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|15921890|ref|NP_377559.1|	-	0.28	11.6	7.9	0.7	10.3	1.4	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4	PF00037.22	gi|15921890|ref|NP_377559.1|	-	0.29	10.7	12.5	0.12	11.9	0.6	3.1	2	1	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|15921890|ref|NP_377559.1|	-	1.6	9.1	12.4	0.32	11.4	0.4	3.0	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|15921890|ref|NP_377559.1|	-	3	8.6	13.3	0.35	11.5	0.9	2.7	2	0	0	2	2	2	0	4Fe-4S	binding	domain
HTH_10	PF04967.7	gi|15921893|ref|NP_377562.1|	-	2.4e-21	75.0	0.1	4.3e-21	74.2	0.1	1.4	1	0	0	1	1	1	1	HTH	DNA	binding	domain
Sigma70_r4	PF04545.11	gi|15921893|ref|NP_377562.1|	-	2.4e-08	33.1	0.3	4.1e-08	32.4	0.2	1.4	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_27	PF13463.1	gi|15921893|ref|NP_377562.1|	-	0.00014	22.1	0.1	0.00037	20.7	0.1	1.7	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_24	PF13412.1	gi|15921893|ref|NP_377562.1|	-	0.00023	20.4	0.1	0.00058	19.1	0.1	1.8	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_26	PF13443.1	gi|15921893|ref|NP_377562.1|	-	0.0035	17.5	0.0	0.012	15.7	0.0	1.9	1	0	0	1	1	1	1	Cro/C1-type	HTH	DNA-binding	domain
Fe_dep_repress	PF01325.14	gi|15921893|ref|NP_377562.1|	-	0.0045	16.8	0.1	0.034	14.0	0.0	2.2	2	0	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
MarR	PF01047.17	gi|15921893|ref|NP_377562.1|	-	0.011	15.3	0.0	0.034	13.8	0.0	1.9	1	1	0	1	1	1	0	MarR	family
HTH_37	PF13744.1	gi|15921893|ref|NP_377562.1|	-	0.02	14.6	0.0	0.047	13.4	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|15921893|ref|NP_377562.1|	-	0.022	14.4	0.0	0.046	13.3	0.0	1.5	1	0	0	1	1	1	0	Homeodomain-like	domain
MarR_2	PF12802.2	gi|15921893|ref|NP_377562.1|	-	0.023	14.3	0.0	0.041	13.5	0.0	1.4	1	0	0	1	1	1	0	MarR	family
HTH_11	PF08279.7	gi|15921893|ref|NP_377562.1|	-	0.04	13.5	0.2	0.46	10.1	0.0	2.6	1	1	1	2	2	2	0	HTH	domain
HTH_Tnp_ISL3	PF13542.1	gi|15921893|ref|NP_377562.1|	-	0.052	12.7	0.0	0.19	10.9	0.0	1.9	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	transposase	family	ISL3
UPF0122	PF04297.9	gi|15921893|ref|NP_377562.1|	-	0.067	13.2	0.1	0.15	12.1	0.0	1.6	1	0	0	1	1	1	0	Putative	helix-turn-helix	protein,	YlxM	/	p13	like
GerE	PF00196.14	gi|15921893|ref|NP_377562.1|	-	0.076	12.3	0.1	0.67	9.3	0.1	2.3	1	1	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
Sigma70_r4_2	PF08281.7	gi|15921893|ref|NP_377562.1|	-	0.077	12.4	0.6	8.1	6.0	0.0	2.4	2	0	0	2	2	2	0	Sigma-70,	region	4
RPA_C	PF08784.6	gi|15921893|ref|NP_377562.1|	-	0.12	12.7	0.0	0.27	11.6	0.0	1.6	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
DUF488	PF04343.8	gi|15921894|ref|NP_377563.1|	-	3e-27	95.4	0.0	3.5e-27	95.1	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF488
DUF3764	PF12594.3	gi|15921894|ref|NP_377563.1|	-	0.29	10.8	1.5	1.7	8.4	0.0	2.3	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3764)
Hemerythrin	PF01814.18	gi|15921895|ref|NP_377564.1|	-	1.5e-05	25.1	0.0	2.2e-05	24.6	0.0	1.2	1	0	0	1	1	1	1	Hemerythrin	HHE	cation	binding	domain
Amidohydro_2	PF04909.9	gi|15921896|ref|NP_377565.1|	-	6.3e-42	144.0	0.0	9e-42	143.5	0.0	1.2	1	0	0	1	1	1	1	Amidohydrolase
TatD_DNase	PF01026.16	gi|15921896|ref|NP_377565.1|	-	2e-05	23.9	0.0	3.9e-05	22.9	0.0	1.4	1	1	0	1	1	1	1	TatD	related	DNase
DDE_5	PF13546.1	gi|15921898|ref|NP_377567.1|	-	0.12	11.2	0.0	0.12	11.2	0.0	1.1	1	0	0	1	1	1	0	DDE	superfamily	endonuclease
COX14	PF14880.1	gi|15921901|ref|NP_377570.1|	-	0.0031	17.1	0.1	0.0072	15.9	0.1	1.6	1	0	0	1	1	1	1	Cytochrome	oxidase	c	assembly
PsbN	PF02468.10	gi|15921901|ref|NP_377570.1|	-	0.71	9.5	3.1	1	9.0	0.6	2.2	2	0	0	2	2	2	0	Photosystem	II	reaction	centre	N	protein	(psbN)
DUF1626	PF07788.6	gi|15921902|ref|NP_377571.1|	-	9.2e-32	108.6	2.6	9.2e-32	108.6	1.8	2.3	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1626)
DUF3782	PF12644.2	gi|15921902|ref|NP_377571.1|	-	1.2e-31	108.2	23.6	1.1e-28	98.7	2.2	3.9	1	1	3	4	4	4	3	Protein	of	unknown	function	(DUF3782)
Erp_C	PF06780.6	gi|15921902|ref|NP_377571.1|	-	0.009	15.8	15.7	0.055	13.3	10.9	2.1	1	1	0	1	1	1	1	Erp	protein	C-terminus
NIR_SIR	PF01077.17	gi|15921902|ref|NP_377571.1|	-	0.066	12.5	1.0	13	5.1	0.0	2.9	3	1	0	3	3	3	0	Nitrite	and	sulphite	reductase	4Fe-4S	domain
CEP19	PF14933.1	gi|15921902|ref|NP_377571.1|	-	0.17	12.1	7.5	0.42	10.9	5.2	1.6	1	0	0	1	1	1	0	CEP19-like	protein
Microtub_bind	PF13931.1	gi|15921902|ref|NP_377571.1|	-	0.32	11.1	10.0	0.5	10.4	6.9	1.2	1	0	0	1	1	1	0	Kinesin-associated	microtubule-binding
Glycos_transf_3	PF00591.16	gi|15921902|ref|NP_377571.1|	-	0.34	10.2	2.4	0.53	9.6	1.7	1.2	1	0	0	1	1	1	0	Glycosyl	transferase	family,	a/b	domain
EFhand_Ca_insen	PF08726.5	gi|15921902|ref|NP_377571.1|	-	0.39	10.7	4.9	0.95	9.4	2.4	2.3	1	1	1	2	2	2	0	Ca2+	insensitive	EF	hand
LUC7	PF03194.10	gi|15921902|ref|NP_377571.1|	-	0.51	9.8	9.0	0.71	9.3	6.3	1.2	1	0	0	1	1	1	0	LUC7	N_terminus
Rabaptin	PF03528.10	gi|15921902|ref|NP_377571.1|	-	0.54	10.1	20.4	0.091	12.6	5.3	2.9	2	1	1	3	3	3	0	Rabaptin
CorA	PF01544.13	gi|15921902|ref|NP_377571.1|	-	0.67	8.9	9.1	1.8	7.5	6.3	1.5	1	1	0	1	1	1	0	CorA-like	Mg2+	transporter	protein
DUF3349	PF11829.3	gi|15921902|ref|NP_377571.1|	-	1.3	9.4	8.1	12	6.4	0.3	2.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3349)
Tnp_P_element	PF12017.3	gi|15921902|ref|NP_377571.1|	-	2.3	7.4	13.6	1.3	8.2	2.8	2.3	1	1	1	2	2	2	0	Transposase	protein
Vfa1	PF08432.5	gi|15921902|ref|NP_377571.1|	-	2.9	7.8	12.8	6.3	6.7	8.9	1.5	1	0	0	1	1	1	0	AAA-ATPase	Vps4-associated	protein	1
5_3_exonuc	PF01367.15	gi|15921902|ref|NP_377571.1|	-	3	8.1	11.7	12	6.2	0.9	2.3	1	1	1	2	2	2	0	5'-3'	exonuclease,	C-terminal	SAM	fold
DnaI_N	PF07319.6	gi|15921902|ref|NP_377571.1|	-	3.7	7.8	11.5	25	5.2	1.0	2.4	1	1	1	2	2	2	0	Primosomal	protein	DnaI	N-terminus
Diphtheria_T	PF02764.9	gi|15921902|ref|NP_377571.1|	-	4.1	7.1	6.8	12	5.6	0.9	2.1	1	1	1	2	2	2	0	Diphtheria	toxin,	T	domain
Phage_Orf51	PF06194.6	gi|15921902|ref|NP_377571.1|	-	4.2	7.5	5.2	26	4.9	0.7	2.8	1	1	2	3	3	3	0	Phage	Conserved	Open	Reading	Frame	51
Peptidase_M16_C	PF05193.16	gi|15921902|ref|NP_377571.1|	-	5	6.7	7.5	16	5.1	0.6	2.4	1	1	0	2	2	2	0	Peptidase	M16	inactive	domain
ACPS	PF01648.15	gi|15921902|ref|NP_377571.1|	-	5.4	6.8	5.6	4.6	7.0	0.7	2.3	1	1	1	2	2	2	0	4'-phosphopantetheinyl	transferase	superfamily
Flexi_CP	PF00286.15	gi|15921902|ref|NP_377571.1|	-	9.5	5.9	7.4	31	4.2	0.6	3.2	2	2	2	4	4	4	0	Viral	coat	protein
DUF3573	PF12097.3	gi|15921902|ref|NP_377571.1|	-	9.6	4.7	6.5	12	4.3	4.5	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3573)
HTH_24	PF13412.1	gi|15921904|ref|NP_377573.1|	-	4.3e-07	29.2	0.5	6.6e-07	28.6	0.3	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_5	PF01022.15	gi|15921904|ref|NP_377573.1|	-	8.1e-07	28.6	0.0	1.5e-06	27.7	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_34	PF13601.1	gi|15921904|ref|NP_377573.1|	-	4.5e-05	23.3	0.0	9.4e-05	22.3	0.0	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_20	PF12840.2	gi|15921904|ref|NP_377573.1|	-	0.00057	19.6	0.0	0.00088	19.0	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_45	PF14947.1	gi|15921904|ref|NP_377573.1|	-	0.0095	15.7	2.2	0.018	14.8	1.5	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix
DUF973	PF06157.6	gi|15921905|ref|NP_377574.1|	-	1.8e-97	325.7	47.5	2.1e-97	325.5	32.9	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
DUF996	PF06195.8	gi|15921905|ref|NP_377574.1|	-	4.2e-06	26.7	30.4	4.1e-05	23.6	12.3	2.5	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF996)
NfeD	PF01957.13	gi|15921906|ref|NP_377575.1|	-	0.0086	16.2	0.3	0.0086	16.2	0.2	2.8	1	1	1	2	2	2	1	NfeD-like	C-terminal,	partner-binding
DUF4229	PF14012.1	gi|15921906|ref|NP_377575.1|	-	0.11	12.3	0.0	0.11	12.3	0.0	4.1	4	1	1	5	5	5	0	Protein	of	unknown	function	(DUF4229)
Ctr	PF04145.10	gi|15921906|ref|NP_377575.1|	-	0.57	10.2	0.1	0.57	10.2	0.1	2.5	3	0	0	3	3	3	0	Ctr	copper	transporter	family
DUF3154	PF11351.3	gi|15921906|ref|NP_377575.1|	-	2	8.1	6.5	0.34	10.6	0.1	2.6	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3154)
TM_helix	PF05552.7	gi|15921906|ref|NP_377575.1|	-	3.8	7.2	11.2	0.093	12.4	1.0	3.0	2	2	0	2	2	2	0	Conserved	TM	helix
CobD_Cbib	PF03186.8	gi|15921906|ref|NP_377575.1|	-	8.7	5.3	7.1	2.6	7.0	0.2	2.3	1	1	1	2	2	2	0	CobD/Cbib	protein
AA_permease_2	PF13520.1	gi|15921907|ref|NP_377576.1|	-	6.6e-35	120.4	61.5	8.2e-35	120.1	42.6	1.1	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|15921907|ref|NP_377576.1|	-	8.1e-12	44.2	52.5	1.8e-11	43.0	36.4	1.5	1	1	0	1	1	1	1	Amino	acid	permease
UPF0126	PF03458.8	gi|15921908|ref|NP_377577.1|	-	7.9e-46	153.5	14.7	8e-26	89.4	2.5	2.2	2	0	0	2	2	2	2	UPF0126	domain
EamA	PF00892.15	gi|15921909|ref|NP_377578.1|	-	4.3e-29	101.1	39.1	5.5e-17	61.9	12.7	2.4	2	1	0	2	2	2	2	EamA-like	transporter	family
EmrE	PF13536.1	gi|15921909|ref|NP_377578.1|	-	5.5e-08	32.9	35.2	6.2e-08	32.8	4.4	3.2	2	1	2	4	4	4	2	Multidrug	resistance	efflux	transporter
TPT	PF03151.11	gi|15921909|ref|NP_377578.1|	-	0.0003	20.4	26.5	0.00066	19.3	6.9	4.1	2	2	1	3	3	3	2	Triose-phosphate	Transporter	family
PMT_2	PF13231.1	gi|15921909|ref|NP_377578.1|	-	0.97	9.3	30.6	3.8	7.3	6.1	2.5	1	1	1	2	2	2	0	Dolichyl-phosphate-mannose-protein	mannosyltransferase
DUF2953	PF11167.3	gi|15921909|ref|NP_377578.1|	-	1.2	9.1	6.2	5.4	6.9	0.3	3.0	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2953)
DUF3185	PF11381.3	gi|15921909|ref|NP_377578.1|	-	3	7.6	13.1	3	7.6	2.8	3.7	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3185)
UPF0546	PF10639.4	gi|15921909|ref|NP_377578.1|	-	9.1	6.1	16.2	0.37	10.6	1.4	2.9	3	1	0	3	3	3	0	Uncharacterised	protein	family	UPF0546
HTH_24	PF13412.1	gi|15921912|ref|NP_377581.1|	-	1.2e-23	82.2	7.1	1.9e-14	52.7	0.4	2.4	2	0	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|15921912|ref|NP_377581.1|	-	2.2e-16	59.1	0.0	7.6e-10	38.1	0.0	2.3	2	0	0	2	2	2	2	AsnC-type	helix-turn-helix	domain
TrmB	PF01978.14	gi|15921912|ref|NP_377581.1|	-	1.7e-08	34.0	0.2	2.9e-05	23.6	0.0	2.5	2	0	0	2	2	2	2	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|15921912|ref|NP_377581.1|	-	2.3e-06	27.1	0.0	0.032	13.9	0.0	2.3	2	0	0	2	2	2	2	MarR	family
HTH_5	PF01022.15	gi|15921912|ref|NP_377581.1|	-	2.7e-06	26.9	0.1	0.00038	20.0	0.0	2.4	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
MarR	PF01047.17	gi|15921912|ref|NP_377581.1|	-	1.4e-05	24.6	0.4	0.12	12.0	0.1	2.4	2	0	0	2	2	2	2	MarR	family
HTH_7	PF02796.10	gi|15921912|ref|NP_377581.1|	-	4.5e-05	23.2	0.1	0.061	13.2	0.0	2.4	2	0	0	2	2	2	2	Helix-turn-helix	domain	of	resolvase
HTH_Mga	PF08280.6	gi|15921912|ref|NP_377581.1|	-	5e-05	22.9	1.0	0.011	15.4	0.1	2.5	2	0	0	2	2	2	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_9	PF08221.6	gi|15921912|ref|NP_377581.1|	-	7.1e-05	22.5	0.4	0.064	13.1	0.1	2.6	2	0	0	2	2	2	2	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
HTH_20	PF12840.2	gi|15921912|ref|NP_377581.1|	-	0.00046	19.9	0.0	0.29	10.9	0.0	2.3	2	0	0	2	2	2	2	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|15921912|ref|NP_377581.1|	-	0.00079	19.4	0.5	0.45	10.6	0.1	2.6	2	0	0	2	2	2	1	Transcriptional	regulator
IF2_N	PF04760.10	gi|15921912|ref|NP_377581.1|	-	0.0011	18.5	0.0	0.0036	16.9	0.0	1.8	1	0	0	1	1	1	1	Translation	initiation	factor	IF-2,	N-terminal	region
B-block_TFIIIC	PF04182.7	gi|15921912|ref|NP_377581.1|	-	0.0014	18.4	1.2	0.92	9.4	0.1	2.7	3	0	0	3	3	3	2	B-block	binding	subunit	of	TFIIIC
HTH_28	PF13518.1	gi|15921912|ref|NP_377581.1|	-	0.0062	16.5	0.0	2.7	8.0	0.0	2.3	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|15921912|ref|NP_377581.1|	-	0.0085	15.7	2.1	0.097	12.3	0.3	2.5	2	0	0	2	2	2	1	HTH	domain
Mga	PF05043.8	gi|15921912|ref|NP_377581.1|	-	0.011	15.9	0.3	8	6.8	0.0	2.9	2	1	0	2	2	2	0	Mga	helix-turn-helix	domain
HTH_27	PF13463.1	gi|15921912|ref|NP_377581.1|	-	0.012	15.9	0.1	0.55	10.6	0.0	2.3	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
TFIIE_alpha	PF02002.12	gi|15921912|ref|NP_377581.1|	-	0.027	13.9	3.2	3.7	7.1	0.2	2.6	2	0	0	2	2	2	0	TFIIE	alpha	subunit
ResIII	PF04851.10	gi|15921913|ref|NP_377582.1|	-	9.1e-27	94.0	2.3	4.9e-25	88.4	0.0	3.3	2	2	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.26	gi|15921913|ref|NP_377582.1|	-	5.2e-17	61.4	0.1	1.8e-16	59.7	0.0	1.9	1	1	0	2	2	2	1	Helicase	conserved	C-terminal	domain
DEAD	PF00270.24	gi|15921913|ref|NP_377582.1|	-	2.8e-13	49.7	0.0	2.3e-12	46.7	0.0	2.4	2	1	0	2	2	2	1	DEAD/DEAH	box	helicase
SNF2_N	PF00176.18	gi|15921913|ref|NP_377582.1|	-	2.5e-11	42.9	0.4	5.6e-08	31.9	0.0	3.0	1	1	1	2	2	2	2	SNF2	family	N-terminal	domain
Helicase_C_2	PF13307.1	gi|15921913|ref|NP_377582.1|	-	3.1e-05	23.9	0.1	0.0039	17.1	0.0	3.4	4	0	0	4	4	4	1	Helicase	C-terminal	domain
DUF3361	PF11841.3	gi|15921913|ref|NP_377582.1|	-	0.0034	17.0	0.2	0.0069	16.1	0.2	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3361)
AAA_30	PF13604.1	gi|15921913|ref|NP_377582.1|	-	0.051	13.1	0.0	0.13	11.8	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
UPF0079	PF02367.12	gi|15921913|ref|NP_377582.1|	-	0.078	12.6	0.1	0.23	11.0	0.0	1.8	2	0	0	2	2	2	0	Uncharacterised	P-loop	hydrolase	UPF0079
HR1	PF02185.11	gi|15921913|ref|NP_377582.1|	-	0.091	12.5	4.1	0.59	9.9	0.2	2.9	3	0	0	3	3	3	0	Hr1	repeat
AAA_23	PF13476.1	gi|15921913|ref|NP_377582.1|	-	0.45	10.8	7.4	0.037	14.3	1.2	2.1	3	0	0	3	3	3	0	AAA	domain
DUF790	PF05626.6	gi|15921914|ref|NP_377583.1|	-	1.1e-134	448.7	13.1	1.5e-134	448.2	9.1	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF790)
PK	PF00224.16	gi|15921917|ref|NP_377586.1|	-	1.2e-81	274.0	0.5	2.4e-81	273.0	0.4	1.5	1	1	0	1	1	1	1	Pyruvate	kinase,	barrel	domain
PK_C	PF02887.11	gi|15921917|ref|NP_377586.1|	-	7.3e-21	73.8	0.3	2e-20	72.4	0.1	1.8	2	0	0	2	2	2	1	Pyruvate	kinase,	alpha/beta	domain
HpcH_HpaI	PF03328.9	gi|15921917|ref|NP_377586.1|	-	0.0011	17.8	0.2	0.0024	16.8	0.0	1.6	2	0	0	2	2	2	1	HpcH/HpaI	aldolase/citrate	lyase	family
DUF2299	PF10061.4	gi|15921918|ref|NP_377587.1|	-	7e-55	184.2	0.1	7.9e-55	184.0	0.0	1.0	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2299)
Methyltransf_11	PF08241.7	gi|15921921|ref|NP_377590.1|	-	4.2e-22	78.4	0.0	8.1e-22	77.5	0.0	1.5	2	0	0	2	2	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|15921921|ref|NP_377590.1|	-	1.2e-13	51.1	0.0	1.4e-13	50.8	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|15921921|ref|NP_377590.1|	-	6.3e-12	45.3	0.1	9.8e-12	44.7	0.1	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|15921921|ref|NP_377590.1|	-	3.7e-09	36.8	0.1	6.1e-09	36.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|15921921|ref|NP_377590.1|	-	5.2e-08	33.2	0.0	9.1e-08	32.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|15921921|ref|NP_377590.1|	-	9.6e-07	28.1	0.0	1.4e-06	27.5	0.0	1.3	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_9	PF08003.6	gi|15921921|ref|NP_377590.1|	-	3.1e-05	22.8	0.1	5.5e-05	22.0	0.1	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1698)
Methyltransf_8	PF05148.10	gi|15921921|ref|NP_377590.1|	-	4.7e-05	23.1	0.0	6.8e-05	22.5	0.0	1.3	1	0	0	1	1	1	1	Hypothetical	methyltransferase
Methyltransf_18	PF12847.2	gi|15921921|ref|NP_377590.1|	-	0.0055	17.2	0.8	0.044	14.3	0.6	2.1	1	1	0	1	1	1	1	Methyltransferase	domain
MetW	PF07021.7	gi|15921921|ref|NP_377590.1|	-	0.0068	15.8	0.0	0.011	15.0	0.0	1.3	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
CMAS	PF02353.15	gi|15921921|ref|NP_377590.1|	-	0.071	12.1	0.0	0.12	11.3	0.0	1.4	2	0	0	2	2	2	0	Mycolic	acid	cyclopropane	synthetase
AIRS_C	PF02769.17	gi|15921922|ref|NP_377591.1|	-	1.6e-15	57.4	0.0	2.5e-15	56.7	0.0	1.3	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|15921922|ref|NP_377591.1|	-	1.9e-08	34.4	0.0	3.1e-08	33.7	0.0	1.3	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
ThiS	PF02597.15	gi|15921923|ref|NP_377592.1|	-	1.5e-08	34.9	0.7	1.7e-08	34.7	0.5	1.0	1	0	0	1	1	1	1	ThiS	family
ThiS-like	PF14453.1	gi|15921923|ref|NP_377592.1|	-	9.1e-05	22.2	0.2	0.00012	21.8	0.1	1.2	1	0	0	1	1	1	1	ThiS-like	ubiquitin
TGS	PF02824.16	gi|15921923|ref|NP_377592.1|	-	0.0047	16.7	0.2	0.022	14.6	0.1	1.9	1	1	0	1	1	1	1	TGS	domain
Ub-Mut7C	PF14451.1	gi|15921923|ref|NP_377592.1|	-	0.11	12.0	0.1	0.21	11.1	0.1	1.5	1	1	0	1	1	1	0	Mut7-C	ubiquitin
SLBB	PF10531.4	gi|15921923|ref|NP_377592.1|	-	0.13	12.1	0.0	0.25	11.2	0.0	1.6	1	1	0	1	1	1	0	SLBB	domain
CRISPR_Cas2	PF09827.4	gi|15921923|ref|NP_377592.1|	-	0.14	12.3	0.0	0.2	11.8	0.0	1.4	1	0	0	1	1	1	0	CRISPR	associated	protein	Cas2
DUF348	PF03990.9	gi|15921923|ref|NP_377592.1|	-	0.14	11.7	1.1	0.4	10.3	0.7	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF348)
Cnd1	PF12717.2	gi|15921924|ref|NP_377593.1|	-	0.0079	16.0	0.7	14	5.4	0.0	3.2	2	1	1	3	3	3	2	non-SMC	mitotic	condensation	complex	subunit	1
HEAT	PF02985.17	gi|15921924|ref|NP_377593.1|	-	0.026	14.5	0.9	34	4.9	0.0	4.4	5	1	1	6	6	6	0	HEAT	repeat
DAO	PF01266.19	gi|15921925|ref|NP_377594.1|	-	1.3e-20	73.5	0.0	1.9e-20	73.1	0.0	1.2	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
KIP1	PF07765.7	gi|15921925|ref|NP_377594.1|	-	0.062	13.1	1.5	12	5.8	0.1	2.9	3	0	0	3	3	3	0	KIP1-like	protein
DUF1955	PF09205.5	gi|15921926|ref|NP_377595.1|	-	3.2e-77	257.5	9.7	3.7e-77	257.3	6.7	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1955)
tRNA_synt_1c_R1	PF04558.10	gi|15921926|ref|NP_377595.1|	-	0.00071	19.1	0.2	0.0013	18.3	0.1	1.4	1	0	0	1	1	1	1	Glutaminyl-tRNA	synthetase,	non-specific	RNA	binding	region	part	1
NikR_C	PF08753.6	gi|15921926|ref|NP_377595.1|	-	0.034	14.0	0.2	0.057	13.3	0.2	1.4	1	0	0	1	1	1	0	NikR	C	terminal	nickel	binding	domain
Rtf2	PF04641.7	gi|15921926|ref|NP_377595.1|	-	0.082	12.0	0.4	0.087	12.0	0.3	1.2	1	0	0	1	1	1	0	Rtf2	RING-finger
Peptidase_U35	PF04586.12	gi|15921927|ref|NP_377596.1|	-	0.0019	18.2	0.0	0.0081	16.1	0.0	1.7	1	1	0	2	2	2	1	Caudovirus	prohead	protease
3H	PF02829.9	gi|15921927|ref|NP_377596.1|	-	0.012	15.5	0.1	0.9	9.5	0.0	2.5	3	0	0	3	3	3	0	3H	domain
FliS	PF02561.9	gi|15921927|ref|NP_377596.1|	-	0.058	13.2	0.1	1	9.2	0.0	2.2	2	0	0	2	2	2	0	Flagellar	protein	FliS
Lipocalin_3	PF12702.2	gi|15921927|ref|NP_377596.1|	-	0.072	13.1	0.1	0.25	11.4	0.0	1.7	1	1	1	2	2	2	0	Lipocalin-like
HeH	PF12949.2	gi|15921930|ref|NP_377599.1|	-	0.0076	15.7	0.6	0.023	14.2	0.0	2.2	2	1	0	2	2	2	1	HeH/LEM	domain
CcdA	PF07362.7	gi|15921930|ref|NP_377599.1|	-	0.013	15.3	0.0	0.017	14.9	0.0	1.3	1	0	0	1	1	1	0	Post-segregation	antitoxin	CcdA
RHH_1	PF01402.16	gi|15921930|ref|NP_377599.1|	-	0.023	14.5	0.2	0.023	14.5	0.1	2.5	3	1	1	4	4	4	0	Ribbon-helix-helix	protein,	copG	family
RelB	PF04221.7	gi|15921930|ref|NP_377599.1|	-	0.028	14.1	0.0	0.036	13.8	0.0	1.3	1	0	0	1	1	1	0	RelB	antitoxin
Imm42	PF15601.1	gi|15921930|ref|NP_377599.1|	-	0.069	12.5	0.2	0.088	12.2	0.1	1.1	1	0	0	1	1	1	0	Immunity	protein	42
DUF4248	PF14053.1	gi|15921930|ref|NP_377599.1|	-	0.14	11.7	0.8	14	5.3	0.0	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4248)
PIN	PF01850.16	gi|15921931|ref|NP_377600.1|	-	7.3e-21	74.7	1.7	9e-21	74.4	1.2	1.1	1	0	0	1	1	1	1	PIN	domain
PIN_2	PF10130.4	gi|15921931|ref|NP_377600.1|	-	0.0094	15.9	0.1	0.013	15.5	0.1	1.2	1	0	0	1	1	1	1	PIN	domain
Lactamase_B	PF00753.22	gi|15921932|ref|NP_377601.1|	-	1.6e-22	80.0	0.5	2.2e-22	79.6	0.3	1.2	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|15921932|ref|NP_377601.1|	-	3.7e-05	23.3	0.1	4.8e-05	22.9	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
TrmB	PF01978.14	gi|15921933|ref|NP_377602.1|	-	1.5e-25	88.6	0.2	2.6e-25	87.8	0.2	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|15921933|ref|NP_377602.1|	-	3.9e-05	22.9	0.3	9.9e-05	21.6	0.0	1.8	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_36	PF13730.1	gi|15921933|ref|NP_377602.1|	-	0.00019	21.4	1.1	0.0042	17.1	0.1	2.3	2	0	0	2	2	2	1	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|15921933|ref|NP_377602.1|	-	0.0017	18.3	0.0	0.0035	17.4	0.0	1.5	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_9	PF08221.6	gi|15921933|ref|NP_377602.1|	-	0.0058	16.4	0.0	0.013	15.3	0.0	1.6	1	0	0	1	1	1	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
LexA_DNA_bind	PF01726.11	gi|15921933|ref|NP_377602.1|	-	0.008	15.7	0.0	0.032	13.7	0.0	2.0	2	0	0	2	2	2	1	LexA	DNA	binding	domain
HTH_29	PF13551.1	gi|15921933|ref|NP_377602.1|	-	0.009	16.1	0.0	0.016	15.3	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_23	PF13384.1	gi|15921933|ref|NP_377602.1|	-	0.02	14.5	0.0	0.048	13.3	0.0	1.6	1	0	0	1	1	1	0	Homeodomain-like	domain
Sec23_helical	PF04815.10	gi|15921933|ref|NP_377602.1|	-	0.029	13.7	0.0	0.14	11.5	0.0	2.0	2	0	0	2	2	2	0	Sec23/Sec24	helical	domain
HTH_28	PF13518.1	gi|15921933|ref|NP_377602.1|	-	0.04	13.9	0.0	0.074	13.0	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_Crp_2	PF13545.1	gi|15921933|ref|NP_377602.1|	-	0.078	12.7	0.0	0.22	11.3	0.0	1.7	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
MFS_1	PF07690.11	gi|15921934|ref|NP_377603.1|	-	9e-35	120.0	34.2	8.2e-19	67.5	10.6	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|15921934|ref|NP_377603.1|	-	0.0012	17.5	22.9	0.0023	16.5	3.0	2.3	1	1	0	2	2	2	2	Sugar	(and	other)	transporter
MFS_3	PF05977.8	gi|15921934|ref|NP_377603.1|	-	0.62	8.1	11.7	1.7	6.6	0.2	2.2	1	1	1	2	2	2	0	Transmembrane	secretion	effector
dUTPase	PF00692.14	gi|15921935|ref|NP_377604.1|	-	1.1e-09	37.8	0.0	1.8e-09	37.1	0.0	1.4	1	1	0	1	1	1	1	dUTPase
DCD	PF06559.6	gi|15921935|ref|NP_377604.1|	-	0.094	11.0	0.0	0.14	10.5	0.0	1.5	1	1	0	1	1	1	0	2'-deoxycytidine	5'-triphosphate	deaminase	(DCD)
DUF973	PF06157.6	gi|15921937|ref|NP_377606.1|	-	1.2e-06	27.6	5.3	1.2e-06	27.6	3.6	1.9	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF973)
DUF4399	PF14347.1	gi|15921937|ref|NP_377606.1|	-	0.083	12.9	0.2	0.16	12.0	0.1	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4399)
DUF2057	PF09829.4	gi|15921937|ref|NP_377606.1|	-	0.16	11.6	0.1	0.18	11.4	0.1	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2057)
DNA_primase_S	PF01896.14	gi|15921938|ref|NP_377607.1|	-	0.093	12.5	0.2	0.23	11.2	0.1	1.7	1	1	0	1	1	1	0	Eukaryotic	and	archaeal	DNA	primase	small	subunit
DSPc	PF00782.15	gi|15921939|ref|NP_377608.1|	-	0.1	12.1	0.0	0.17	11.4	0.0	1.3	1	0	0	1	1	1	0	Dual	specificity	phosphatase,	catalytic	domain
PaREP1	PF05942.6	gi|15921940|ref|NP_377609.1|	-	1.3e-29	102.3	3.5	1.9e-29	101.8	2.5	1.2	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
DUF357	PF04010.8	gi|15921940|ref|NP_377609.1|	-	0.0011	18.5	2.2	0.0049	16.5	1.2	2.3	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF357)
Phasin_2	PF09361.5	gi|15921940|ref|NP_377609.1|	-	0.0025	17.8	0.9	0.0044	17.0	0.7	1.5	1	1	0	1	1	1	1	Phasin	protein
Fe-ADH	PF00465.14	gi|15921941|ref|NP_377610.1|	-	7.6e-50	169.5	0.0	1.5e-49	168.6	0.0	1.4	1	1	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH_2	PF13685.1	gi|15921941|ref|NP_377610.1|	-	5.6e-06	25.8	0.0	8.2e-06	25.3	0.0	1.2	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
PIN	PF01850.16	gi|15921942|ref|NP_377611.1|	-	2.8e-07	30.8	0.0	3.2e-07	30.7	0.0	1.1	1	0	0	1	1	1	1	PIN	domain
DUF1682	PF07946.9	gi|15921943|ref|NP_377612.1|	-	0.0087	14.9	3.1	0.011	14.5	2.2	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1682)
Rap1-DNA-bind	PF09197.5	gi|15921943|ref|NP_377612.1|	-	0.046	14.2	0.6	0.058	13.9	0.4	1.2	1	0	0	1	1	1	0	Rap1,	DNA-binding
Cytidylate_kin2	PF13189.1	gi|15921943|ref|NP_377612.1|	-	0.049	13.5	1.1	0.063	13.1	0.8	1.1	1	0	0	1	1	1	0	Cytidylate	kinase-like	family
RHH_1	PF01402.16	gi|15921943|ref|NP_377612.1|	-	0.061	13.2	5.2	0.26	11.2	0.2	3.2	3	0	0	3	3	3	0	Ribbon-helix-helix	protein,	copG	family
Mob_Pre	PF01076.14	gi|15921943|ref|NP_377612.1|	-	0.11	12.1	2.4	0.14	11.7	1.7	1.3	1	1	0	1	1	1	0	Plasmid	recombination	enzyme
Post_transc_reg	PF13797.1	gi|15921943|ref|NP_377612.1|	-	0.62	9.6	4.6	0.84	9.2	3.1	1.5	1	1	0	1	1	1	0	Post-transcriptional	regulator
RHH_1	PF01402.16	gi|15921944|ref|NP_377613.1|	-	0.064	13.1	0.4	0.64	9.9	0.3	2.2	1	1	0	1	1	1	0	Ribbon-helix-helix	protein,	copG	family
PIN	PF01850.16	gi|15921945|ref|NP_377614.1|	-	1.4e-14	54.4	0.1	1.6e-14	54.2	0.1	1.1	1	0	0	1	1	1	1	PIN	domain
PIN_3	PF13470.1	gi|15921945|ref|NP_377614.1|	-	1.1e-05	26.0	0.0	2e-05	25.2	0.0	1.6	1	1	0	1	1	1	1	PIN	domain
DUF3940	PF13076.1	gi|15921945|ref|NP_377614.1|	-	0.075	12.5	0.0	0.27	10.8	0.0	1.9	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3940)
MFS_1	PF07690.11	gi|15921946|ref|NP_377615.1|	-	9e-26	90.4	45.3	1.1e-16	60.4	14.7	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
KCl_Cotrans_1	PF03522.10	gi|15921946|ref|NP_377615.1|	-	0.24	10.9	0.5	0.45	10.0	0.4	1.4	1	0	0	1	1	1	0	K-Cl	Co-transporter	type	1	(KCC1)
DUF1129	PF06570.6	gi|15921947|ref|NP_377616.1|	-	0.7	9.1	4.3	1.3	8.2	2.9	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1129)
oligo_HPY	PF08352.7	gi|15921949|ref|NP_377618.1|	-	6.7e-07	29.5	0.0	1.2e-06	28.7	0.0	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
ABC_tran	PF00005.22	gi|15921950|ref|NP_377619.1|	-	3.6e-07	30.5	0.0	5.1e-07	30.0	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|15921950|ref|NP_377619.1|	-	0.00059	20.1	3.7	0.074	13.4	2.5	2.4	1	1	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
BPD_transp_1	PF00528.17	gi|15921952|ref|NP_377621.1|	-	4.3e-12	45.9	13.0	4.3e-12	45.9	9.0	3.2	2	1	2	4	4	4	2	Binding-protein-dependent	transport	system	inner	membrane	component
Peptidase_M32	PF02074.10	gi|15921953|ref|NP_377622.1|	-	4.6e-161	536.8	7.4	5.1e-161	536.6	5.1	1.0	1	0	0	1	1	1	1	Carboxypeptidase	Taq	(M32)	metallopeptidase
SEP	PF08059.8	gi|15921953|ref|NP_377622.1|	-	0.077	13.3	0.0	0.24	11.7	0.0	1.9	1	0	0	1	1	1	0	SEP	domain
MMPL	PF03176.10	gi|15921954|ref|NP_377623.1|	-	6.7e-59	199.2	27.5	2.4e-31	108.6	5.9	2.9	3	1	0	3	3	3	2	MMPL	family
Sterol-sensing	PF12349.3	gi|15921954|ref|NP_377623.1|	-	1.9e-05	24.1	5.3	1.9e-05	24.1	3.7	2.9	2	0	0	2	2	2	1	Sterol-sensing	domain	of	SREBP	cleavage-activation
SKG6	PF08693.5	gi|15921954|ref|NP_377623.1|	-	0.045	13.0	0.1	0.045	13.0	0.1	3.7	5	0	0	5	5	5	0	Transmembrane	alpha-helix	domain
ABC1	PF03109.11	gi|15921955|ref|NP_377624.1|	-	1.6e-26	92.6	0.4	4.6e-26	91.1	0.1	1.9	2	0	0	2	2	2	1	ABC1	family
RIO1	PF01163.17	gi|15921955|ref|NP_377624.1|	-	7.4e-06	25.4	0.4	5.4e-05	22.6	0.3	2.2	1	1	0	1	1	1	1	RIO1	family
Pkinase	PF00069.20	gi|15921955|ref|NP_377624.1|	-	0.0015	17.7	0.7	0.013	14.6	0.5	2.1	1	1	0	1	1	1	1	Protein	kinase	domain
APH	PF01636.18	gi|15921955|ref|NP_377624.1|	-	0.005	16.6	0.0	0.014	15.0	0.0	1.8	2	0	0	2	2	2	1	Phosphotransferase	enzyme	family
Gp-FAR-1	PF05823.7	gi|15921955|ref|NP_377624.1|	-	0.011	15.6	0.2	0.53	10.2	0.0	2.5	2	0	0	2	2	2	0	Nematode	fatty	acid	retinoid	binding	protein	(Gp-FAR-1)
RAP-1	PF03085.10	gi|15921955|ref|NP_377624.1|	-	0.52	9.6	3.0	0.63	9.3	0.5	2.2	3	0	0	3	3	3	0	Rhoptry-associated	protein	1	(RAP-1)
HSP20	PF00011.16	gi|15921956|ref|NP_377625.1|	-	4.3e-10	39.3	0.0	5.3e-10	39.0	0.0	1.1	1	0	0	1	1	1	1	Hsp20/alpha	crystallin	family
CCG	PF02754.11	gi|15921957|ref|NP_377626.1|	-	5.5e-10	39.1	0.0	6.6e-07	29.2	0.0	2.6	2	0	0	2	2	2	2	Cysteine-rich	domain
Dynactin	PF12455.3	gi|15921957|ref|NP_377626.1|	-	0.062	12.2	0.0	0.1	11.5	0.0	1.2	1	0	0	1	1	1	0	Dynein	associated	protein
Baculo_IE-1	PF05290.6	gi|15921957|ref|NP_377626.1|	-	8.1	6.1	7.0	8.4	6.1	1.6	3.4	3	1	0	3	3	3	0	Baculovirus	immediate-early	protein	(IE-0)
DUF162	PF02589.10	gi|15921958|ref|NP_377627.1|	-	1.1e-53	181.6	0.2	1.4e-53	181.1	0.1	1.2	1	0	0	1	1	1	1	Uncharacterised	ACR,	YkgG	family	COG1556
Fer4_8	PF13183.1	gi|15921958|ref|NP_377627.1|	-	1.6e-10	40.8	1.8	2.7e-10	40.0	1.2	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|15921958|ref|NP_377627.1|	-	7.9e-08	32.6	1.3	0.0023	18.3	0.1	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|15921958|ref|NP_377627.1|	-	2.5e-06	27.7	2.6	6.9e-06	26.3	1.9	1.7	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|15921958|ref|NP_377627.1|	-	1.2e-05	25.5	2.0	2.5e-05	24.5	1.4	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|15921958|ref|NP_377627.1|	-	2e-05	24.2	5.4	0.00035	20.3	4.4	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|15921958|ref|NP_377627.1|	-	0.00014	22.0	6.5	0.019	15.2	6.0	2.3	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|15921958|ref|NP_377627.1|	-	0.0019	17.9	8.7	0.036	13.9	1.3	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4	PF00037.22	gi|15921958|ref|NP_377627.1|	-	0.002	17.6	8.0	0.017	14.7	1.2	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_20	PF14691.1	gi|15921958|ref|NP_377627.1|	-	0.0046	16.5	1.8	0.15	11.6	0.1	2.4	2	0	0	2	2	2	1	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_4	PF12800.2	gi|15921958|ref|NP_377627.1|	-	0.015	15.5	6.0	0.14	12.5	0.4	2.2	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|15921958|ref|NP_377627.1|	-	0.023	15.4	5.3	0.085	13.6	3.7	2.0	1	1	0	1	1	1	0	4Fe-4S	double	cluster	binding	domain
HTH_32	PF13565.1	gi|15921958|ref|NP_377627.1|	-	0.029	15.1	0.0	0.087	13.6	0.0	1.9	1	0	0	1	1	1	0	Homeodomain-like	domain
Fer4_21	PF14697.1	gi|15921958|ref|NP_377627.1|	-	0.055	13.3	5.9	0.17	11.7	0.8	2.3	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|15921958|ref|NP_377627.1|	-	0.055	13.4	6.0	0.6	10.1	1.1	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
NAGLU_N	PF12971.2	gi|15921958|ref|NP_377627.1|	-	0.071	12.7	0.0	0.53	9.9	0.0	2.4	3	0	0	3	3	3	0	Alpha-N-acetylglucosaminidase	(NAGLU)	N-terminal	domain
Fer4_3	PF12798.2	gi|15921958|ref|NP_377627.1|	-	0.23	12.1	11.8	2.6	8.8	2.7	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
DUF973	PF06157.6	gi|15921959|ref|NP_377628.1|	-	1.6e-91	306.2	25.1	2.8e-91	305.4	17.4	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
Cg6151-P	PF10233.4	gi|15921959|ref|NP_377628.1|	-	7.8	6.5	18.7	13	5.8	1.1	2.5	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	CG6151-P
DUF973	PF06157.6	gi|15921960|ref|NP_377629.1|	-	4.3e-33	114.5	31.6	1.2e-16	60.5	15.0	2.1	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF973)
DUF1469	PF07332.6	gi|15921960|ref|NP_377629.1|	-	8.1	6.1	19.6	1.2	8.8	6.1	2.6	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1469)
NHL	PF01436.16	gi|15921961|ref|NP_377630.1|	-	5.1e-07	29.3	8.8	0.58	10.2	0.0	7.2	7	0	0	7	7	7	3	NHL	repeat
SGL	PF08450.7	gi|15921961|ref|NP_377630.1|	-	0.02	14.3	0.2	9.3	5.5	0.0	3.8	2	1	2	4	4	4	0	SMP-30/Gluconolaconase/LRE-like	region
PQQ_3	PF13570.1	gi|15921961|ref|NP_377630.1|	-	0.048	13.9	9.2	40	4.6	0.0	6.8	6	0	0	6	6	6	0	PQQ-like	domain
Rifin_STEVOR	PF02009.11	gi|15921961|ref|NP_377630.1|	-	1	8.9	3.6	1.5	8.3	2.5	1.2	1	0	0	1	1	1	0	Rifin/stevor	family
HpaB_N	PF11794.3	gi|15921962|ref|NP_377631.1|	-	1.9e-92	309.4	0.1	2.9e-92	308.7	0.1	1.3	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
HpaB	PF03241.8	gi|15921962|ref|NP_377631.1|	-	5.3e-65	218.0	0.1	8.3e-65	217.4	0.1	1.3	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	C	terminal
AA_permease_2	PF13520.1	gi|15921963|ref|NP_377632.1|	-	1.2e-11	43.8	56.7	1.2e-11	43.8	39.3	1.9	1	1	1	2	2	2	2	Amino	acid	permease
AA_permease	PF00324.16	gi|15921963|ref|NP_377632.1|	-	2.4e-09	36.0	52.3	4e-09	35.3	36.2	1.3	1	0	0	1	1	1	1	Amino	acid	permease
DUF973	PF06157.6	gi|15921964|ref|NP_377633.1|	-	1.2e-05	24.4	24.4	1.5e-05	24.1	16.9	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
DUF996	PF06195.8	gi|15921964|ref|NP_377633.1|	-	0.008	16.1	7.0	0.008	16.1	4.9	2.2	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF996)
DUF389	PF04087.9	gi|15921965|ref|NP_377634.1|	-	0.061	13.2	1.9	0.18	11.7	1.2	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF389)
DUF420	PF04238.7	gi|15921965|ref|NP_377634.1|	-	0.57	10.1	6.3	0.41	10.5	2.9	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF420)
EB_dh	PF09459.5	gi|15921967|ref|NP_377636.1|	-	4.2e-77	259.1	5.0	5.4e-77	258.7	3.5	1.1	1	0	0	1	1	1	1	Ethylbenzene	dehydrogenase
ATP_synth_reg	PF14960.1	gi|15921967|ref|NP_377636.1|	-	1.3	8.3	5.9	4.2	6.6	1.9	2.6	2	0	0	2	2	2	0	ATP	synthase	regulation
DUF3446	PF11928.3	gi|15921967|ref|NP_377636.1|	-	2	8.6	11.8	0.19	11.9	3.7	2.7	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF3446)
Rieske	PF00355.21	gi|15921969|ref|NP_377638.1|	-	2.6e-12	46.1	0.9	6.1e-12	44.9	0.6	1.7	1	1	0	1	1	1	1	Rieske	[2Fe-2S]	domain
CytB6-F_Fe-S	PF08802.5	gi|15921969|ref|NP_377638.1|	-	0.054	13.5	0.9	0.11	12.5	0.0	2.0	2	0	0	2	2	2	0	Cytochrome	B6-F	complex	Fe-S	subunit
Cytochrom_B_N_2	PF13631.1	gi|15921970|ref|NP_377639.1|	-	2.2e-54	183.7	6.6	2.2e-54	183.7	4.6	3.6	4	1	0	4	4	4	1	Cytochrome	b(N-terminal)/b6/petB
DUF2976	PF11190.3	gi|15921970|ref|NP_377639.1|	-	4	7.0	0.0	4	7.0	0.0	4.9	5	1	1	6	6	6	0	Protein	of	unknown	function	(DUF2976)
CopD	PF05425.8	gi|15921970|ref|NP_377639.1|	-	5.4	7.2	15.7	7.6	6.7	3.9	3.7	2	1	1	3	3	3	0	Copper	resistance	protein	D
PetM	PF08041.6	gi|15921971|ref|NP_377640.1|	-	0.035	13.5	3.0	0.068	12.6	2.1	1.4	1	0	0	1	1	1	0	PetM	family	of	cytochrome	b6f	complex	subunit	7
DUF1634	PF07843.6	gi|15921971|ref|NP_377640.1|	-	0.066	12.8	1.2	0.23	11.0	0.1	2.0	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF1634)
DUF1198	PF06711.6	gi|15921972|ref|NP_377641.1|	-	0.037	13.8	0.1	2.5	7.9	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1198)
MFS_1	PF07690.11	gi|15921973|ref|NP_377642.1|	-	7.4e-54	182.7	49.0	7.4e-54	182.7	34.0	1.9	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|15921973|ref|NP_377642.1|	-	3.9e-08	32.3	15.1	3.9e-08	32.3	10.5	2.8	2	1	0	2	2	2	1	Sugar	(and	other)	transporter
MFS_3	PF05977.8	gi|15921973|ref|NP_377642.1|	-	1.5e-05	23.3	13.4	1.5e-05	23.3	9.3	2.0	2	0	0	2	2	2	1	Transmembrane	secretion	effector
ABC2_membrane_5	PF13346.1	gi|15921974|ref|NP_377643.1|	-	0.0041	16.4	36.3	0.0041	16.4	25.1	3.6	3	1	0	3	3	3	2	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|15921974|ref|NP_377643.1|	-	0.086	11.9	69.3	8.3	5.4	48.0	2.6	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
ABC_tran	PF00005.22	gi|15921975|ref|NP_377644.1|	-	5.7e-25	88.1	0.0	9.1e-25	87.5	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|15921975|ref|NP_377644.1|	-	4.9e-10	39.8	0.2	1.3e-07	31.9	0.1	2.4	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.1	gi|15921975|ref|NP_377644.1|	-	0.04	14.2	4.4	0.068	13.4	3.1	1.9	1	1	0	1	1	1	0	AAA	domain
SRP54	PF00448.17	gi|15921975|ref|NP_377644.1|	-	0.27	10.6	2.9	0.21	11.0	0.8	1.7	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
DUF418	PF04235.7	gi|15921976|ref|NP_377645.1|	-	1.2	8.7	9.8	0.14	11.8	1.7	2.3	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF418)
zinc_ribbon_2	PF13240.1	gi|15921979|ref|NP_377648.1|	-	7.7e-07	28.4	6.9	1.2e-06	27.8	4.8	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|15921979|ref|NP_377648.1|	-	1.6e-06	27.1	4.3	2.3e-06	26.6	3.0	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|15921979|ref|NP_377648.1|	-	7.4e-06	25.6	0.6	1e-05	25.2	0.4	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
UPF0547	PF10571.4	gi|15921979|ref|NP_377648.1|	-	0.029	14.0	3.4	0.056	13.1	2.3	1.4	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
zf-tcix	PF14952.1	gi|15921979|ref|NP_377648.1|	-	0.037	13.3	1.0	0.056	12.7	0.7	1.3	1	0	0	1	1	1	0	Putative	treble-clef,	zinc-finger,	Zn-binding
Auto_anti-p27	PF06677.7	gi|15921979|ref|NP_377648.1|	-	0.42	10.4	2.1	2.1	8.1	0.0	2.3	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
DUF2616	PF11077.3	gi|15921979|ref|NP_377648.1|	-	0.95	8.9	4.5	0.17	11.3	0.8	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2616)
Alpha_GJ	PF03229.8	gi|15921980|ref|NP_377649.1|	-	0.014	15.7	1.5	0.014	15.7	1.1	2.1	2	0	0	2	2	2	0	Alphavirus	glycoprotein	J
Rifin_STEVOR	PF02009.11	gi|15921980|ref|NP_377649.1|	-	0.51	9.9	6.8	1.1	8.8	4.7	1.6	1	1	0	1	1	1	0	Rifin/stevor	family
ATP1G1_PLM_MAT8	PF02038.11	gi|15921980|ref|NP_377649.1|	-	5.6	6.0	6.2	10	5.2	4.3	1.4	1	0	0	1	1	1	0	ATP1G1/PLM/MAT8	family
TMEM154	PF15102.1	gi|15921980|ref|NP_377649.1|	-	9.4	5.9	13.2	1.1	8.9	4.8	2.5	2	0	0	2	2	2	0	TMEM154	protein	family
MMPL	PF03176.10	gi|15921981|ref|NP_377650.1|	-	1.1e-62	211.7	19.9	1.1e-39	136.0	4.0	2.3	2	0	0	2	2	2	2	MMPL	family
RsmJ	PF04378.8	gi|15921982|ref|NP_377651.1|	-	0.0057	15.6	0.0	0.0085	15.1	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	small	subunit	methyltransferase	D,	RsmJ
DUF4295	PF14128.1	gi|15921982|ref|NP_377651.1|	-	6.9	6.3	9.3	25	4.5	0.2	3.2	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4295)
DNA_pol_B	PF00136.16	gi|15921983|ref|NP_377652.1|	-	5.2e-19	68.3	5.1	7.2e-18	64.6	3.6	2.2	1	1	0	1	1	1	1	DNA	polymerase	family	B
Sec15	PF04091.7	gi|15921984|ref|NP_377653.1|	-	0.0021	17.4	0.0	0.0025	17.2	0.0	1.1	1	0	0	1	1	1	1	Exocyst	complex	subunit	Sec15-like
DUF1308	PF07000.6	gi|15921984|ref|NP_377653.1|	-	0.023	13.3	0.1	0.025	13.2	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1308)
DUF4599	PF15371.1	gi|15921984|ref|NP_377653.1|	-	0.084	12.9	0.4	5.3	7.1	0.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4599)
PmbA_TldD	PF01523.11	gi|15921985|ref|NP_377654.1|	-	2.9e-13	49.7	0.1	6.2e-13	48.6	0.1	1.6	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
Hydantoinase_B	PF02538.9	gi|15921989|ref|NP_377658.1|	-	2.2e-164	547.5	1.4	2.5e-164	547.4	0.9	1.0	1	0	0	1	1	1	1	Hydantoinase	B/oxoprolinase
Hydantoinase_A	PF01968.13	gi|15921990|ref|NP_377659.1|	-	2.2e-89	299.4	6.1	3.6e-88	295.4	0.0	3.0	3	0	0	3	3	3	2	Hydantoinase/oxoprolinase
Hydant_A_N	PF05378.8	gi|15921990|ref|NP_377659.1|	-	1.1e-49	168.2	0.0	2.2e-49	167.3	0.0	1.5	1	0	0	1	1	1	1	Hydantoinase/oxoprolinase	N-terminal	region
MutL	PF13941.1	gi|15921990|ref|NP_377659.1|	-	0.0028	16.0	0.6	0.55	8.4	0.0	2.6	2	0	0	2	2	2	2	MutL	protein
EutA	PF06277.6	gi|15921990|ref|NP_377659.1|	-	0.091	11.3	0.5	0.16	10.5	0.4	1.3	1	0	0	1	1	1	0	Ethanolamine	utilisation	protein	EutA
PIN	PF01850.16	gi|15921991|ref|NP_377660.1|	-	5e-08	33.2	2.0	6.4e-08	32.9	1.4	1.1	1	0	0	1	1	1	1	PIN	domain
FIVAR	PF07554.8	gi|15921991|ref|NP_377660.1|	-	0.0044	17.2	0.3	0.011	15.8	0.2	1.7	1	0	0	1	1	1	1	Uncharacterised	Sugar-binding	Domain
Tail_P2_I	PF09684.5	gi|15921992|ref|NP_377661.1|	-	0.0055	16.2	0.0	0.0057	16.2	0.0	1.1	1	0	0	1	1	1	1	Phage	tail	protein	(Tail_P2_I)
EcsB	PF05975.7	gi|15921992|ref|NP_377661.1|	-	0.07	11.5	0.2	0.076	11.4	0.2	1.0	1	0	0	1	1	1	0	Bacterial	ABC	transporter	protein	EcsB
RHH_1	PF01402.16	gi|15921992|ref|NP_377661.1|	-	0.21	11.5	1.2	11	6.1	0.1	2.5	3	0	0	3	3	3	0	Ribbon-helix-helix	protein,	copG	family
DUF217	PF02697.9	gi|15921992|ref|NP_377661.1|	-	0.79	10.0	5.7	2.1	8.6	3.9	1.8	1	1	0	1	1	1	0	Uncharacterized	ACR,	COG1753
PilM_2	PF11104.3	gi|15921993|ref|NP_377662.1|	-	0.061	12.1	0.7	0.085	11.7	0.5	1.1	1	0	0	1	1	1	0	Type	IV	pilus	assembly	protein	PilM;
DUF1700	PF08006.6	gi|15921993|ref|NP_377662.1|	-	0.084	12.1	2.3	0.19	11.0	1.6	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1700)
TMEM223	PF14640.1	gi|15921994|ref|NP_377663.1|	-	0.037	13.9	0.5	6.6	6.6	0.1	2.2	2	0	0	2	2	2	0	Transmembrane	protein	223
Pro-kuma_activ	PF09286.6	gi|15921996|ref|NP_377665.1|	-	7.6e-11	42.2	0.0	1.6e-10	41.1	0.0	1.5	1	0	0	1	1	1	1	Pro-kumamolisin,	activation	domain
Peptidase_S8	PF00082.17	gi|15921996|ref|NP_377665.1|	-	7.4e-09	35.1	0.0	1.6e-08	34.0	0.0	1.5	1	0	0	1	1	1	1	Subtilase	family
Rifin_STEVOR	PF02009.11	gi|15921996|ref|NP_377665.1|	-	0.13	11.8	3.3	0.2	11.2	2.3	1.3	1	0	0	1	1	1	0	Rifin/stevor	family
DUF3272	PF11676.3	gi|15921996|ref|NP_377665.1|	-	1.9	8.5	8.4	2	8.4	2.5	2.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3272)
HATPase_c	PF02518.21	gi|15921997|ref|NP_377666.1|	-	0.0069	16.0	0.5	0.78	9.4	0.0	2.3	2	0	0	2	2	2	2	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
YopH_N	PF09013.5	gi|15921997|ref|NP_377666.1|	-	0.044	13.4	0.1	0.14	11.8	0.0	1.8	2	0	0	2	2	2	0	YopH,	N-terminal
OAS1_C	PF10421.4	gi|15921997|ref|NP_377666.1|	-	0.078	12.4	0.6	0.51	9.7	0.3	2.0	2	0	0	2	2	2	0	2'-5'-oligoadenylate	synthetase	1,	domain	2,	C-terminus
Thioredoxin_8	PF13905.1	gi|15921997|ref|NP_377666.1|	-	0.42	10.7	3.8	0.5	10.5	1.0	2.3	2	1	0	2	2	2	0	Thioredoxin-like
DUF4065	PF13274.1	gi|15921997|ref|NP_377666.1|	-	1.5	9.5	7.6	0.14	12.8	0.7	2.4	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF4065)
DUF3800	PF12686.2	gi|15921998|ref|NP_377667.1|	-	0.00032	20.4	0.4	0.45	10.1	0.0	2.3	2	1	0	2	2	2	2	Protein	of	unknown	function	(DUF3800)
PsiE	PF06146.7	gi|15921999|ref|NP_377668.1|	-	9e-08	32.2	3.1	9e-08	32.2	2.1	2.3	2	1	1	3	3	3	1	Phosphate-starvation-inducible	E
CobD_Cbib	PF03186.8	gi|15921999|ref|NP_377668.1|	-	2.2	7.2	4.8	0.3	10.1	0.7	1.5	2	0	0	2	2	2	0	CobD/Cbib	protein
Methyltransf_11	PF08241.7	gi|15922000|ref|NP_377669.1|	-	4.6e-10	39.8	0.0	6.7e-10	39.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|15922000|ref|NP_377669.1|	-	1.1e-06	28.5	0.0	1.5e-06	28.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|15922000|ref|NP_377669.1|	-	1e-05	25.1	1.8	2.9e-05	23.7	1.3	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|15922000|ref|NP_377669.1|	-	0.00014	21.0	0.3	0.00017	20.7	0.2	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_25	PF13649.1	gi|15922000|ref|NP_377669.1|	-	0.0011	19.3	0.0	0.0017	18.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
TehB	PF03848.9	gi|15922000|ref|NP_377669.1|	-	0.0021	17.2	0.3	0.0027	16.9	0.2	1.2	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
Methyltransf_12	PF08242.7	gi|15922000|ref|NP_377669.1|	-	0.0034	17.8	0.0	0.0049	17.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|15922000|ref|NP_377669.1|	-	0.012	15.0	0.0	0.016	14.5	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	small	domain
Methyltransf_2	PF00891.13	gi|15922000|ref|NP_377669.1|	-	0.043	12.9	0.0	0.057	12.6	0.0	1.2	1	0	0	1	1	1	0	O-methyltransferase
DUF2173	PF09941.4	gi|15922001|ref|NP_377670.1|	-	0.00026	20.8	0.1	0.00052	19.9	0.1	1.7	1	1	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2173)
Pex24p	PF06398.6	gi|15922001|ref|NP_377670.1|	-	0.069	11.9	1.9	0.088	11.5	1.3	1.2	1	0	0	1	1	1	0	Integral	peroxisomal	membrane	peroxin
DUF202	PF02656.10	gi|15922001|ref|NP_377670.1|	-	0.12	12.6	0.9	0.53	10.5	0.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF202)
FtsX	PF02687.16	gi|15922001|ref|NP_377670.1|	-	0.18	11.5	6.2	0.31	10.8	4.3	1.4	1	0	0	1	1	1	0	FtsX-like	permease	family
PIRT	PF15099.1	gi|15922001|ref|NP_377670.1|	-	0.55	9.4	4.2	2.6	7.2	2.9	2.0	1	1	0	1	1	1	0	Phosphoinositide-interacting	protein	family
DAD	PF02109.11	gi|15922002|ref|NP_377671.1|	-	0.049	13.7	0.0	0.076	13.0	0.0	1.4	1	1	0	1	1	1	0	DAD	family
DUF929	PF06053.6	gi|15922004|ref|NP_377673.1|	-	4.8e-90	301.0	11.3	5.4e-90	300.8	7.9	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF929)
Fer4_9	PF13187.1	gi|15922005|ref|NP_377674.1|	-	1.2e-05	25.4	12.1	0.00011	22.3	8.1	2.3	1	1	1	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|15922005|ref|NP_377674.1|	-	6.6e-05	23.2	10.6	0.00022	21.5	0.6	2.9	3	0	0	3	3	3	1	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|15922005|ref|NP_377674.1|	-	7.5e-05	22.1	3.5	7.5e-05	22.1	2.4	2.3	3	0	0	3	3	2	1	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|15922005|ref|NP_377674.1|	-	0.00017	21.2	3.4	0.00017	21.2	2.3	2.1	2	0	0	2	2	1	1	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|15922005|ref|NP_377674.1|	-	0.0019	17.9	2.9	0.0019	17.9	2.0	2.7	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_11	PF13247.1	gi|15922005|ref|NP_377674.1|	-	0.0023	17.8	5.5	0.0048	16.7	3.8	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|15922005|ref|NP_377674.1|	-	0.0027	17.4	12.6	0.0033	17.1	1.5	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|15922005|ref|NP_377674.1|	-	0.0031	17.8	7.3	0.016	15.5	0.2	2.8	3	0	0	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|15922005|ref|NP_377674.1|	-	0.0043	17.4	1.5	0.0043	17.4	1.0	2.5	3	0	0	3	3	2	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|15922005|ref|NP_377674.1|	-	0.017	15.0	12.7	0.092	12.7	8.4	2.4	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_5	PF12801.2	gi|15922005|ref|NP_377674.1|	-	0.018	14.8	1.1	0.018	14.8	0.8	5.4	4	0	0	4	4	4	0	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|15922005|ref|NP_377674.1|	-	0.021	15.1	3.5	0.021	15.1	2.5	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|15922005|ref|NP_377674.1|	-	0.021	15.3	6.2	0.021	15.3	4.3	2.6	3	0	0	3	3	2	0	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|15922005|ref|NP_377674.1|	-	0.26	11.1	13.7	0.12	12.3	1.7	2.2	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_20	PF14691.1	gi|15922005|ref|NP_377674.1|	-	1	8.9	10.4	0.21	11.2	1.9	2.3	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_16	PF13484.1	gi|15922005|ref|NP_377674.1|	-	5.8	7.7	14.1	0.32	11.7	1.9	2.5	1	1	3	4	4	4	0	4Fe-4S	double	cluster	binding	domain
DUF2704	PF10866.3	gi|15922006|ref|NP_377675.1|	-	0.0057	16.0	1.9	0.024	14.0	0.2	2.2	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2704)
DUF1404	PF07185.6	gi|15922007|ref|NP_377676.1|	-	1.7e-60	203.4	14.2	1.9e-60	203.2	9.8	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1404)
TMEM237	PF15383.1	gi|15922007|ref|NP_377676.1|	-	0.83	8.7	2.7	3.8	6.5	0.9	2.0	1	1	1	2	2	2	0	Transmembrane	protein	237
ADH_N	PF08240.7	gi|15922008|ref|NP_377677.1|	-	1.4e-23	82.7	0.5	2.1e-23	82.1	0.4	1.3	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
FAD_binding_3	PF01494.14	gi|15922008|ref|NP_377677.1|	-	0.01	14.8	0.0	0.016	14.3	0.0	1.2	1	0	0	1	1	1	0	FAD	binding	domain
ADH_zinc_N	PF00107.21	gi|15922008|ref|NP_377677.1|	-	0.017	14.6	0.0	0.03	13.8	0.0	1.4	1	0	0	1	1	1	0	Zinc-binding	dehydrogenase
Pyr_redox_2	PF07992.9	gi|15922008|ref|NP_377677.1|	-	0.035	13.9	0.0	0.067	13.0	0.0	1.6	1	1	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
FAA_hydrolase	PF01557.13	gi|15922009|ref|NP_377678.1|	-	9.8e-64	214.7	0.0	1.2e-63	214.5	0.0	1.0	1	0	0	1	1	1	1	Fumarylacetoacetate	(FAA)	hydrolase	family
KH_2	PF07650.12	gi|15922009|ref|NP_377678.1|	-	0.00089	18.7	0.1	0.0024	17.3	0.1	1.7	1	0	0	1	1	1	1	KH	domain
ABC_tran	PF00005.22	gi|15922010|ref|NP_377679.1|	-	2.1e-31	109.0	0.1	2.2e-14	53.9	0.0	3.2	2	1	1	3	3	3	3	ABC	transporter
AAA_21	PF13304.1	gi|15922010|ref|NP_377679.1|	-	1.3e-17	64.7	13.0	3.1e-06	27.3	0.1	4.5	2	2	3	5	5	5	3	AAA	domain
AAA_15	PF13175.1	gi|15922010|ref|NP_377679.1|	-	2.2e-07	30.3	12.4	0.15	11.0	0.0	3.8	1	1	2	3	3	3	3	AAA	ATPase	domain
NB-ARC	PF00931.17	gi|15922010|ref|NP_377679.1|	-	1.1e-06	27.7	0.1	0.022	13.6	0.0	2.3	2	0	0	2	2	2	2	NB-ARC	domain
AAA_29	PF13555.1	gi|15922010|ref|NP_377679.1|	-	1.3e-06	27.8	0.2	0.022	14.2	0.1	2.3	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
Miro	PF08477.8	gi|15922010|ref|NP_377679.1|	-	3.5e-06	27.5	0.1	0.036	14.5	0.0	2.4	2	0	0	2	2	2	2	Miro-like	protein
NACHT	PF05729.7	gi|15922010|ref|NP_377679.1|	-	5.5e-06	26.1	0.0	0.034	13.7	0.0	2.5	2	0	0	2	2	2	2	NACHT	domain
AAA_22	PF13401.1	gi|15922010|ref|NP_377679.1|	-	1.6e-05	25.0	0.0	0.069	13.3	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
AAA	PF00004.24	gi|15922010|ref|NP_377679.1|	-	3.1e-05	24.1	0.1	0.049	13.8	0.0	2.6	2	1	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_14	PF13173.1	gi|15922010|ref|NP_377679.1|	-	4.4e-05	23.3	3.8	0.034	14.0	0.0	3.5	2	1	0	2	2	2	1	AAA	domain
SRP54	PF00448.17	gi|15922010|ref|NP_377679.1|	-	4.7e-05	22.9	0.1	0.039	13.3	0.1	2.3	2	0	0	2	2	2	2	SRP54-type	protein,	GTPase	domain
AAA_16	PF13191.1	gi|15922010|ref|NP_377679.1|	-	5.7e-05	23.1	0.0	0.33	10.9	0.0	2.3	2	0	0	2	2	2	2	AAA	ATPase	domain
UPF0079	PF02367.12	gi|15922010|ref|NP_377679.1|	-	0.00014	21.5	0.5	0.46	10.1	0.0	2.4	2	0	0	2	2	2	2	Uncharacterised	P-loop	hydrolase	UPF0079
SMC_N	PF02463.14	gi|15922010|ref|NP_377679.1|	-	0.00014	21.1	6.2	0.32	10.1	0.7	4.0	2	2	0	3	3	3	1	RecF/RecN/SMC	N	terminal	domain
MobB	PF03205.9	gi|15922010|ref|NP_377679.1|	-	0.00022	20.9	3.9	0.084	12.5	0.2	2.6	2	0	0	2	2	2	2	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_33	PF13671.1	gi|15922010|ref|NP_377679.1|	-	0.00024	21.0	0.4	0.95	9.3	0.0	2.6	2	1	1	3	3	3	2	AAA	domain
AAA_24	PF13479.1	gi|15922010|ref|NP_377679.1|	-	0.00028	20.5	0.1	0.8	9.2	0.0	2.3	2	0	0	2	2	2	2	AAA	domain
DUF258	PF03193.11	gi|15922010|ref|NP_377679.1|	-	0.0003	20.0	0.3	0.2	10.8	0.0	2.3	2	0	0	2	2	2	2	Protein	of	unknown	function,	DUF258
AAA_17	PF13207.1	gi|15922010|ref|NP_377679.1|	-	0.00036	21.3	5.6	0.05	14.4	0.0	2.9	3	0	0	3	3	2	1	AAA	domain
AAA_23	PF13476.1	gi|15922010|ref|NP_377679.1|	-	0.00039	20.8	6.2	0.037	14.3	0.2	3.1	2	1	2	4	4	4	2	AAA	domain
AAA_18	PF13238.1	gi|15922010|ref|NP_377679.1|	-	0.00054	20.2	0.4	0.45	10.8	0.1	2.9	2	1	0	2	2	2	1	AAA	domain
T2SE	PF00437.15	gi|15922010|ref|NP_377679.1|	-	0.00069	18.5	0.1	0.36	9.6	0.0	2.3	2	0	0	2	2	2	2	Type	II/IV	secretion	system	protein
MMR_HSR1	PF01926.18	gi|15922010|ref|NP_377679.1|	-	0.00073	19.4	0.0	1.4	8.9	0.0	2.5	2	0	0	2	2	2	2	50S	ribosome-binding	GTPase
cobW	PF02492.14	gi|15922010|ref|NP_377679.1|	-	0.0014	18.1	0.1	0.12	11.8	0.0	2.4	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
SbcCD_C	PF13558.1	gi|15922010|ref|NP_377679.1|	-	0.0015	18.3	0.1	2.3	8.1	0.0	2.8	2	1	0	2	2	2	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_25	PF13481.1	gi|15922010|ref|NP_377679.1|	-	0.0029	17.0	0.0	0.55	9.5	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
RNA_helicase	PF00910.17	gi|15922010|ref|NP_377679.1|	-	0.0029	17.7	0.0	1.6	8.9	0.0	2.6	2	0	0	2	2	2	1	RNA	helicase
PduV-EutP	PF10662.4	gi|15922010|ref|NP_377679.1|	-	0.0039	16.6	0.3	2	7.8	0.1	2.7	2	0	0	2	2	2	1	Ethanolamine	utilisation	-	propanediol	utilisation
Arch_ATPase	PF01637.13	gi|15922010|ref|NP_377679.1|	-	0.0042	16.8	6.9	0.39	10.3	0.4	2.8	2	2	1	3	3	3	2	Archaeal	ATPase
AAA_30	PF13604.1	gi|15922010|ref|NP_377679.1|	-	0.0075	15.8	0.1	2.6	7.5	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
Pox_A32	PF04665.7	gi|15922010|ref|NP_377679.1|	-	0.011	15.0	0.0	2.5	7.3	0.0	2.4	2	0	0	2	2	2	0	Poxvirus	A32	protein
AAA_10	PF12846.2	gi|15922010|ref|NP_377679.1|	-	0.012	15.1	1.7	1.2	8.5	0.1	2.6	2	1	0	2	2	2	0	AAA-like	domain
AAA_5	PF07728.9	gi|15922010|ref|NP_377679.1|	-	0.014	15.1	0.2	2.1	8.0	0.0	2.4	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
AAA_19	PF13245.1	gi|15922010|ref|NP_377679.1|	-	0.015	14.9	0.0	8.3	6.2	0.0	2.4	2	0	0	2	2	2	0	Part	of	AAA	domain
NTPase_1	PF03266.10	gi|15922010|ref|NP_377679.1|	-	0.016	14.9	4.2	2.2	7.9	0.2	2.7	3	0	0	3	3	2	0	NTPase
Zeta_toxin	PF06414.7	gi|15922010|ref|NP_377679.1|	-	0.018	14.1	0.0	4.1	6.4	0.0	2.3	2	0	0	2	2	2	0	Zeta	toxin
AAA_28	PF13521.1	gi|15922010|ref|NP_377679.1|	-	0.025	14.5	0.4	2.1	8.2	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
Viral_helicase1	PF01443.13	gi|15922010|ref|NP_377679.1|	-	0.034	13.6	0.0	1.9	7.9	0.0	2.3	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
ArgK	PF03308.11	gi|15922010|ref|NP_377679.1|	-	0.038	12.7	0.2	7	5.3	0.0	2.4	2	0	0	2	2	2	0	ArgK	protein
Septin	PF00735.13	gi|15922010|ref|NP_377679.1|	-	0.069	12.1	0.4	5.6	5.9	0.0	2.6	3	0	0	3	3	3	0	Septin
Casein_kappa	PF00997.13	gi|15922011|ref|NP_377680.1|	-	0.2	11.3	1.5	0.29	10.8	1.0	1.2	1	0	0	1	1	1	0	Kappa	casein
DUF3974	PF13120.1	gi|15922011|ref|NP_377680.1|	-	0.9	9.3	3.3	0.87	9.4	0.6	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3974)
SPW	PF03779.9	gi|15922012|ref|NP_377681.1|	-	0.014	14.7	4.2	0.014	14.7	2.9	2.7	3	2	1	4	4	4	0	SPW	repeat
MFS_1	PF07690.11	gi|15922013|ref|NP_377682.1|	-	1.2e-43	149.1	62.3	1e-28	100.1	10.7	3.3	1	1	1	3	3	3	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|15922013|ref|NP_377682.1|	-	6.2e-07	28.3	38.0	9.8e-07	27.6	7.7	3.2	3	2	1	4	4	4	2	Sugar	(and	other)	transporter
PUCC	PF03209.10	gi|15922013|ref|NP_377682.1|	-	1e-05	24.4	5.5	1e-05	24.4	3.8	2.7	2	1	0	2	2	2	1	PUCC	protein
MFS_3	PF05977.8	gi|15922013|ref|NP_377682.1|	-	0.0016	16.6	1.0	0.0016	16.6	0.7	2.5	2	0	0	2	2	2	1	Transmembrane	secretion	effector
PagP	PF07017.6	gi|15922013|ref|NP_377682.1|	-	0.087	12.1	0.1	0.21	10.8	0.0	1.6	1	0	0	1	1	1	0	Antimicrobial	peptide	resistance	and	lipid	A	acylation	protein	PagP
DUF2583	PF10762.4	gi|15922013|ref|NP_377682.1|	-	2.6	8.2	8.6	3	8.0	0.1	3.9	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2583)
HTH_27	PF13463.1	gi|15922014|ref|NP_377683.1|	-	5.7e-14	52.1	0.1	1.2e-13	51.1	0.0	1.6	2	0	0	2	2	1	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|15922014|ref|NP_377683.1|	-	2.6e-11	42.9	0.3	5.3e-11	42.0	0.0	1.6	2	0	0	2	2	2	1	MarR	family
MarR	PF01047.17	gi|15922014|ref|NP_377683.1|	-	1.1e-09	37.8	0.1	2.5e-09	36.6	0.0	1.8	2	0	0	2	2	2	1	MarR	family
HTH_34	PF13601.1	gi|15922014|ref|NP_377683.1|	-	3.1e-05	23.9	0.3	0.0001	22.2	0.0	1.9	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_24	PF13412.1	gi|15922014|ref|NP_377683.1|	-	0.0031	16.8	0.2	0.034	13.5	0.0	2.8	3	0	0	3	3	3	1	Winged	helix-turn-helix	DNA-binding
Fe_dep_repress	PF01325.14	gi|15922014|ref|NP_377683.1|	-	0.0037	17.1	0.2	0.011	15.6	0.0	1.8	2	0	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HxlR	PF01638.12	gi|15922014|ref|NP_377683.1|	-	0.0057	16.2	0.7	0.0097	15.5	0.0	1.8	2	1	0	2	2	2	1	HxlR-like	helix-turn-helix
TrmB	PF01978.14	gi|15922014|ref|NP_377683.1|	-	0.0058	16.3	1.0	0.016	14.9	0.0	2.3	3	1	0	3	3	3	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_20	PF12840.2	gi|15922014|ref|NP_377683.1|	-	0.0084	15.8	0.1	0.025	14.3	0.0	2.0	2	1	0	2	2	2	1	Helix-turn-helix	domain
HTH_1	PF00126.22	gi|15922014|ref|NP_377683.1|	-	0.0085	15.8	0.2	0.028	14.1	0.0	1.9	2	0	0	2	2	2	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
HTH_5	PF01022.15	gi|15922014|ref|NP_377683.1|	-	0.033	13.8	0.2	0.27	10.9	0.0	2.4	3	0	0	3	3	2	0	Bacterial	regulatory	protein,	arsR	family
DUF2250	PF10007.4	gi|15922014|ref|NP_377683.1|	-	0.068	13.0	0.1	0.21	11.5	0.0	1.9	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF4423	PF14394.1	gi|15922014|ref|NP_377683.1|	-	0.071	12.6	0.1	0.33	10.4	0.1	2.1	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
DUF3510	PF12022.3	gi|15922014|ref|NP_377683.1|	-	0.13	12.3	1.3	7.8	6.6	0.1	2.7	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF3510)
AAA	PF00004.24	gi|15922015|ref|NP_377684.1|	-	1.2e-73	245.5	0.0	2.4e-36	124.8	0.0	2.5	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_17	PF13207.1	gi|15922015|ref|NP_377684.1|	-	2.4e-18	67.0	0.1	8.6e-08	33.0	0.0	3.4	2	2	1	3	3	2	2	AAA	domain
AAA_22	PF13401.1	gi|15922015|ref|NP_377684.1|	-	1.5e-16	60.7	4.0	0.00048	20.2	0.0	5.4	2	2	3	5	5	5	3	AAA	domain
RuvB_N	PF05496.7	gi|15922015|ref|NP_377684.1|	-	7.9e-15	54.5	0.0	8.4e-08	31.5	0.0	2.6	2	0	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_5	PF07728.9	gi|15922015|ref|NP_377684.1|	-	1.3e-13	50.8	1.2	1.8e-05	24.4	0.1	4.0	2	2	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
AAA_18	PF13238.1	gi|15922015|ref|NP_377684.1|	-	3.6e-13	49.9	0.0	3e-05	24.3	0.0	2.8	2	0	0	2	2	2	2	AAA	domain
AAA_14	PF13173.1	gi|15922015|ref|NP_377684.1|	-	1.3e-12	47.7	0.0	2e-06	27.6	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
DUF815	PF05673.8	gi|15922015|ref|NP_377684.1|	-	1.2e-11	43.9	0.0	5.7e-06	25.4	0.0	2.3	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
TIP49	PF06068.8	gi|15922015|ref|NP_377684.1|	-	1.5e-10	40.3	0.7	6.7e-05	21.7	0.0	2.5	3	0	0	3	3	2	2	TIP49	C-terminus
AAA_33	PF13671.1	gi|15922015|ref|NP_377684.1|	-	3.2e-10	40.0	0.0	0.00024	20.9	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
AAA_16	PF13191.1	gi|15922015|ref|NP_377684.1|	-	5.7e-10	39.4	0.2	0.00095	19.1	0.0	3.9	3	2	1	4	4	3	2	AAA	ATPase	domain
RNA_helicase	PF00910.17	gi|15922015|ref|NP_377684.1|	-	7.3e-10	38.9	0.0	0.0038	17.3	0.0	3.6	3	0	0	3	3	2	2	RNA	helicase
IstB_IS21	PF01695.12	gi|15922015|ref|NP_377684.1|	-	9.1e-10	38.2	0.2	0.00098	18.5	0.0	3.0	4	0	0	4	4	2	2	IstB-like	ATP	binding	protein
Vps4_C	PF09336.5	gi|15922015|ref|NP_377684.1|	-	9.4e-10	38.2	0.2	0.00013	21.7	0.0	2.7	2	0	0	2	2	2	2	Vps4	C	terminal	oligomerisation	domain
AAA_2	PF07724.9	gi|15922015|ref|NP_377684.1|	-	4.9e-09	36.3	0.0	6.5e-05	22.8	0.0	2.7	2	1	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
AAA_19	PF13245.1	gi|15922015|ref|NP_377684.1|	-	2.5e-08	33.5	0.1	0.0065	16.2	0.0	2.8	3	0	0	3	3	2	2	Part	of	AAA	domain
Zeta_toxin	PF06414.7	gi|15922015|ref|NP_377684.1|	-	2.6e-08	33.1	0.0	0.0048	16.0	0.0	2.3	2	0	0	2	2	2	2	Zeta	toxin
AAA_28	PF13521.1	gi|15922015|ref|NP_377684.1|	-	2.7e-08	33.9	0.0	0.0039	17.1	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
SKI	PF01202.17	gi|15922015|ref|NP_377684.1|	-	7.2e-08	32.4	0.3	0.014	15.2	0.0	3.0	3	0	0	3	3	2	2	Shikimate	kinase
AAA_25	PF13481.1	gi|15922015|ref|NP_377684.1|	-	1.2e-07	31.3	4.7	0.28	10.5	0.1	4.4	3	1	1	4	4	4	2	AAA	domain
AAA_24	PF13479.1	gi|15922015|ref|NP_377684.1|	-	1.3e-07	31.4	2.2	0.0075	15.8	0.1	2.6	2	0	0	2	2	2	2	AAA	domain
Arch_ATPase	PF01637.13	gi|15922015|ref|NP_377684.1|	-	2.1e-07	30.9	0.1	0.22	11.1	0.0	3.7	2	2	1	3	3	3	2	Archaeal	ATPase
Mg_chelatase	PF01078.16	gi|15922015|ref|NP_377684.1|	-	4.4e-07	29.2	0.1	0.028	13.5	0.0	2.4	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
ABC_tran	PF00005.22	gi|15922015|ref|NP_377684.1|	-	2.7e-06	27.7	0.0	0.12	12.6	0.0	2.6	2	0	0	2	2	2	2	ABC	transporter
Parvo_NS1	PF01057.12	gi|15922015|ref|NP_377684.1|	-	3e-06	26.3	0.0	0.058	12.2	0.0	2.2	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
NACHT	PF05729.7	gi|15922015|ref|NP_377684.1|	-	3e-06	26.9	0.3	0.67	9.6	0.0	4.1	3	1	1	4	4	4	2	NACHT	domain
Sigma54_activ_2	PF14532.1	gi|15922015|ref|NP_377684.1|	-	3.8e-06	26.9	0.0	0.42	10.6	0.0	3.4	3	0	0	3	3	3	2	Sigma-54	interaction	domain
KTI12	PF08433.5	gi|15922015|ref|NP_377684.1|	-	1e-05	24.8	0.0	0.08	12.1	0.0	2.6	2	0	0	2	2	2	2	Chromatin	associated	protein	KTI12
AAA_3	PF07726.6	gi|15922015|ref|NP_377684.1|	-	1.3e-05	24.7	0.0	0.24	10.9	0.0	3.0	2	1	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
NTPase_1	PF03266.10	gi|15922015|ref|NP_377684.1|	-	2e-05	24.3	0.6	1.4	8.5	0.0	4.2	4	0	0	4	4	4	2	NTPase
UPF0079	PF02367.12	gi|15922015|ref|NP_377684.1|	-	4.2e-05	23.1	0.3	0.26	10.9	0.0	2.9	3	0	0	3	3	2	2	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_11	PF13086.1	gi|15922015|ref|NP_377684.1|	-	4.4e-05	23.1	0.0	0.33	10.4	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
KaiC	PF06745.8	gi|15922015|ref|NP_377684.1|	-	6.8e-05	22.0	3.4	2.9	6.9	0.0	4.5	2	2	2	4	4	4	0	KaiC
Bac_DnaA	PF00308.13	gi|15922015|ref|NP_377684.1|	-	8.6e-05	22.2	0.0	0.12	11.9	0.0	3.0	2	1	0	2	2	2	1	Bacterial	dnaA	protein
AAA_30	PF13604.1	gi|15922015|ref|NP_377684.1|	-	0.00012	21.7	0.1	0.65	9.5	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
PhoH	PF02562.11	gi|15922015|ref|NP_377684.1|	-	0.00012	21.4	0.1	0.16	11.1	0.0	2.6	2	0	0	2	2	2	2	PhoH-like	protein
NB-ARC	PF00931.17	gi|15922015|ref|NP_377684.1|	-	0.00018	20.4	0.1	0.45	9.3	0.0	2.9	3	0	0	3	3	3	2	NB-ARC	domain
CPT	PF07931.7	gi|15922015|ref|NP_377684.1|	-	0.00035	20.2	0.0	1	8.9	0.0	2.4	2	0	0	2	2	2	2	Chloramphenicol	phosphotransferase-like	protein
KAP_NTPase	PF07693.9	gi|15922015|ref|NP_377684.1|	-	0.00045	19.3	0.7	1.1	8.1	0.0	3.3	2	2	0	2	2	2	1	KAP	family	P-loop	domain
Sigma54_activat	PF00158.21	gi|15922015|ref|NP_377684.1|	-	0.00048	19.6	0.0	1.2	8.6	0.0	3.1	4	0	0	4	4	2	1	Sigma-54	interaction	domain
6PF2K	PF01591.13	gi|15922015|ref|NP_377684.1|	-	0.00073	18.6	0.0	0.044	12.8	0.0	2.8	3	0	0	3	3	3	1	6-phosphofructo-2-kinase
Cytidylate_kin2	PF13189.1	gi|15922015|ref|NP_377684.1|	-	0.00074	19.4	0.0	0.23	11.3	0.0	2.7	2	0	0	2	2	2	1	Cytidylate	kinase-like	family
ArgK	PF03308.11	gi|15922015|ref|NP_377684.1|	-	0.0011	17.8	0.0	0.98	8.1	0.0	2.4	2	0	0	2	2	2	2	ArgK	protein
ResIII	PF04851.10	gi|15922015|ref|NP_377684.1|	-	0.0011	18.8	0.0	1.1	9.0	0.0	2.6	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
AAA_10	PF12846.2	gi|15922015|ref|NP_377684.1|	-	0.0016	17.9	0.6	6.4	6.1	0.0	4.0	2	1	0	2	2	2	0	AAA-like	domain
MMR_HSR1	PF01926.18	gi|15922015|ref|NP_377684.1|	-	0.0016	18.3	0.0	2.6	8.0	0.0	2.8	2	0	0	2	2	2	0	50S	ribosome-binding	GTPase
IPT	PF01745.11	gi|15922015|ref|NP_377684.1|	-	0.0018	17.4	0.0	0.62	9.1	0.0	2.4	2	0	0	2	2	2	1	Isopentenyl	transferase
T2SE	PF00437.15	gi|15922015|ref|NP_377684.1|	-	0.0019	17.1	0.0	0.97	8.2	0.0	2.4	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
AAA_21	PF13304.1	gi|15922015|ref|NP_377684.1|	-	0.0019	18.2	7.7	0.41	10.5	0.8	3.9	3	2	0	3	3	3	1	AAA	domain
AAA_23	PF13476.1	gi|15922015|ref|NP_377684.1|	-	0.0022	18.3	4.3	1.1	9.5	0.1	2.9	1	1	1	2	2	2	2	AAA	domain
Rad17	PF03215.10	gi|15922015|ref|NP_377684.1|	-	0.0025	16.5	0.0	0.39	9.3	0.0	2.2	2	0	0	2	2	2	1	Rad17	cell	cycle	checkpoint	protein
ATP-synt_ab	PF00006.20	gi|15922015|ref|NP_377684.1|	-	0.0026	17.2	0.0	0.64	9.4	0.0	2.3	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
APS_kinase	PF01583.15	gi|15922015|ref|NP_377684.1|	-	0.0029	17.2	0.1	2.8	7.5	0.0	2.5	2	0	0	2	2	2	0	Adenylylsulphate	kinase
DUF258	PF03193.11	gi|15922015|ref|NP_377684.1|	-	0.0032	16.6	0.0	1.2	8.2	0.0	2.3	2	0	0	2	2	2	1	Protein	of	unknown	function,	DUF258
DUF2075	PF09848.4	gi|15922015|ref|NP_377684.1|	-	0.0037	16.3	0.0	1.8	7.4	0.0	2.3	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
PduV-EutP	PF10662.4	gi|15922015|ref|NP_377684.1|	-	0.0038	16.7	0.0	1.5	8.2	0.0	2.4	2	0	0	2	2	2	1	Ethanolamine	utilisation	-	propanediol	utilisation
Guanylate_kin	PF00625.16	gi|15922015|ref|NP_377684.1|	-	0.0047	16.3	0.0	4	6.8	0.0	2.7	2	0	0	2	2	2	0	Guanylate	kinase
MobB	PF03205.9	gi|15922015|ref|NP_377684.1|	-	0.0057	16.3	0.0	3.2	7.4	0.0	2.6	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
PPV_E1_C	PF00519.12	gi|15922015|ref|NP_377684.1|	-	0.0073	14.9	0.0	1.7	7.1	0.0	2.2	2	0	0	2	2	2	1	Papillomavirus	helicase
AAA_29	PF13555.1	gi|15922015|ref|NP_377684.1|	-	0.0096	15.4	0.1	4.2	6.9	0.0	2.5	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
Torsin	PF06309.6	gi|15922015|ref|NP_377684.1|	-	0.03	14.2	0.0	6.2	6.7	0.0	2.4	2	0	0	2	2	2	0	Torsin
Miro	PF08477.8	gi|15922015|ref|NP_377684.1|	-	0.031	14.7	0.0	15	6.1	0.0	3.1	2	1	0	2	2	2	0	Miro-like	protein
Thymidylate_kin	PF02223.12	gi|15922015|ref|NP_377684.1|	-	0.032	13.6	0.0	4.6	6.5	0.0	2.5	2	0	0	2	2	2	0	Thymidylate	kinase
Gtr1_RagA	PF04670.7	gi|15922015|ref|NP_377684.1|	-	0.033	13.3	0.3	17	4.4	0.0	3.5	4	0	0	4	4	4	0	Gtr1/RagA	G	protein	conserved	region
SRP54	PF00448.17	gi|15922015|ref|NP_377684.1|	-	0.038	13.4	0.1	11	5.3	0.0	2.9	3	0	0	3	3	2	0	SRP54-type	protein,	GTPase	domain
ADK	PF00406.17	gi|15922015|ref|NP_377684.1|	-	0.056	13.3	0.0	11	5.8	0.0	2.8	2	0	0	2	2	2	0	Adenylate	kinase
Phe_hydrox_dim	PF07976.7	gi|15922015|ref|NP_377684.1|	-	0.13	11.8	0.0	0.24	10.9	0.0	1.4	1	0	0	1	1	1	0	Phenol	hydroxylase,	C-terminal	dimerisation	domain
MSG	PF02349.10	gi|15922015|ref|NP_377684.1|	-	0.17	11.8	1.1	0.24	11.3	0.2	1.7	2	0	0	2	2	1	0	Major	surface	glycoprotein
Zot	PF05707.7	gi|15922015|ref|NP_377684.1|	-	0.71	9.2	3.2	34	3.8	0.3	3.8	2	2	0	2	2	2	0	Zonular	occludens	toxin	(Zot)
NTP_transf_2	PF01909.18	gi|15922017|ref|NP_377686.1|	-	1.7e-11	44.2	2.7	5.6e-11	42.6	1.9	1.9	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
DUF294	PF03445.8	gi|15922017|ref|NP_377686.1|	-	0.0016	18.1	0.0	0.015	14.9	0.0	2.0	2	0	0	2	2	2	1	Putative	nucleotidyltransferase	DUF294
HEPN	PF05168.9	gi|15922018|ref|NP_377687.1|	-	3.9e-22	78.3	1.2	4.7e-22	78.0	0.8	1.0	1	0	0	1	1	1	1	HEPN	domain
TPR_10	PF13374.1	gi|15922018|ref|NP_377687.1|	-	0.023	14.5	0.6	5.2	7.1	0.1	2.4	2	0	0	2	2	2	0	Tetratricopeptide	repeat
E1-E2_ATPase	PF00122.15	gi|15922019|ref|NP_377688.1|	-	3.9e-50	170.0	3.9	7.5e-50	169.1	2.7	1.5	1	0	0	1	1	1	1	E1-E2	ATPase
Hydrolase	PF00702.21	gi|15922019|ref|NP_377688.1|	-	3.3e-30	106.1	1.4	1.1e-29	104.4	0.4	2.2	2	1	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
HMA	PF00403.21	gi|15922019|ref|NP_377688.1|	-	1.4e-17	63.6	9.9	4.7e-13	49.0	1.0	3.3	3	0	0	3	3	3	2	Heavy-metal-associated	domain
HAD	PF12710.2	gi|15922019|ref|NP_377688.1|	-	1.2e-13	51.6	0.1	3.4e-13	50.1	0.1	1.8	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.7	gi|15922019|ref|NP_377688.1|	-	0.00029	20.4	0.0	0.017	14.7	0.0	2.6	2	0	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
NIF	PF03031.13	gi|15922019|ref|NP_377688.1|	-	0.0042	16.7	0.0	0.03	14.0	0.0	2.1	2	0	0	2	2	2	1	NLI	interacting	factor-like	phosphatase
YHS	PF04945.8	gi|15922020|ref|NP_377689.1|	-	8e-20	70.4	1.4	9.7e-20	70.1	1.0	1.1	1	0	0	1	1	1	1	YHS	domain
Arc_trans_TRASH	PF08394.5	gi|15922020|ref|NP_377689.1|	-	4.2e-05	23.6	1.7	5.5e-05	23.2	1.2	1.2	1	0	0	1	1	1	1	Archaeal	TRASH	domain
zf-FCS	PF06467.9	gi|15922020|ref|NP_377689.1|	-	9.2e-05	22.0	1.7	0.00013	21.5	1.2	1.3	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
Ribosomal_L24e	PF01246.15	gi|15922020|ref|NP_377689.1|	-	0.024	14.4	0.1	0.027	14.3	0.1	1.2	1	0	0	1	1	1	0	Ribosomal	protein	L24e
DUF2116	PF09889.4	gi|15922020|ref|NP_377689.1|	-	0.32	10.8	1.3	0.36	10.6	0.2	1.6	2	0	0	2	2	2	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
Arc_trans_TRASH	PF08394.5	gi|15922021|ref|NP_377690.1|	-	3.7e-19	68.5	11.4	6.5e-19	67.7	7.9	1.4	1	0	0	1	1	1	1	Archaeal	TRASH	domain
HTH_24	PF13412.1	gi|15922021|ref|NP_377690.1|	-	4.4e-12	45.1	0.5	4.4e-12	45.1	0.3	1.9	2	0	0	2	2	1	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|15922021|ref|NP_377690.1|	-	2.8e-09	36.4	0.6	9.9e-09	34.7	0.1	2.0	2	0	0	2	2	2	1	HTH	domain
HTH_AsnC-type	PF13404.1	gi|15922021|ref|NP_377690.1|	-	3.2e-08	32.9	0.2	1.2e-07	31.1	0.0	1.9	2	0	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
HTH_23	PF13384.1	gi|15922021|ref|NP_377690.1|	-	1e-07	31.3	0.0	1.8e-07	30.5	0.0	1.3	1	0	0	1	1	1	1	Homeodomain-like	domain
MarR	PF01047.17	gi|15922021|ref|NP_377690.1|	-	4.4e-07	29.4	0.3	1.3e-06	28.0	0.1	1.9	2	0	0	2	2	1	1	MarR	family
TrmB	PF01978.14	gi|15922021|ref|NP_377690.1|	-	5e-06	26.1	0.5	1.1e-05	25.0	0.4	1.6	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_28	PF13518.1	gi|15922021|ref|NP_377690.1|	-	1.1e-05	25.2	0.0	2.3e-05	24.2	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_36	PF13730.1	gi|15922021|ref|NP_377690.1|	-	1.7e-05	24.8	0.6	5.1e-05	23.3	0.2	2.1	2	0	0	2	2	1	1	Helix-turn-helix	domain
Mga	PF05043.8	gi|15922021|ref|NP_377690.1|	-	9.1e-05	22.6	1.2	0.00023	21.3	0.1	2.0	2	0	0	2	2	2	1	Mga	helix-turn-helix	domain
HTH_5	PF01022.15	gi|15922021|ref|NP_377690.1|	-	0.00013	21.5	0.1	0.00057	19.4	0.1	1.9	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
MarR_2	PF12802.2	gi|15922021|ref|NP_377690.1|	-	0.00016	21.2	0.1	0.00034	20.2	0.0	1.6	2	0	0	2	2	1	1	MarR	family
zf-FCS	PF06467.9	gi|15922021|ref|NP_377690.1|	-	0.00031	20.3	4.6	0.00066	19.2	3.2	1.6	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
TFIIE_alpha	PF02002.12	gi|15922021|ref|NP_377690.1|	-	0.0004	19.8	1.1	0.0004	19.8	0.7	1.9	2	0	0	2	2	2	1	TFIIE	alpha	subunit
HTH_20	PF12840.2	gi|15922021|ref|NP_377690.1|	-	0.00041	20.0	0.0	0.003	17.3	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_IclR	PF09339.5	gi|15922021|ref|NP_377690.1|	-	0.00043	19.7	0.0	0.0007	19.1	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_38	PF13936.1	gi|15922021|ref|NP_377690.1|	-	0.00047	19.6	0.7	0.0011	18.4	0.5	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_6	PF01418.12	gi|15922021|ref|NP_377690.1|	-	0.00076	19.1	0.1	0.0019	17.9	0.1	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain,	rpiR	family
Fe_dep_repress	PF01325.14	gi|15922021|ref|NP_377690.1|	-	0.00077	19.3	0.6	0.012	15.5	0.2	2.3	2	0	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_29	PF13551.1	gi|15922021|ref|NP_377690.1|	-	0.00097	19.2	0.0	0.0021	18.1	0.0	1.5	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_7	PF02796.10	gi|15922021|ref|NP_377690.1|	-	0.001	18.8	0.6	0.0023	17.7	0.1	1.8	2	0	0	2	2	1	1	Helix-turn-helix	domain	of	resolvase
HTH_45	PF14947.1	gi|15922021|ref|NP_377690.1|	-	0.006	16.3	0.3	0.012	15.3	0.2	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_27	PF13463.1	gi|15922021|ref|NP_377690.1|	-	0.0063	16.8	0.1	0.017	15.4	0.0	1.7	2	0	0	2	2	1	1	Winged	helix	DNA-binding	domain
z-alpha	PF02295.12	gi|15922021|ref|NP_377690.1|	-	0.0066	16.1	0.3	0.015	15.0	0.2	1.6	1	0	0	1	1	1	1	Adenosine	deaminase	z-alpha	domain
HTH_22	PF13309.1	gi|15922021|ref|NP_377690.1|	-	0.007	16.1	0.4	0.1	12.3	0.1	2.3	2	0	0	2	2	2	1	HTH	domain
HTH_Tnp_ISL3	PF13542.1	gi|15922021|ref|NP_377690.1|	-	0.007	15.5	0.0	0.012	14.7	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain	of	transposase	family	ISL3
DUF2250	PF10007.4	gi|15922021|ref|NP_377690.1|	-	0.0074	16.1	0.3	0.0074	16.1	0.2	1.8	2	0	0	2	2	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Rrf2	PF02082.15	gi|15922021|ref|NP_377690.1|	-	0.0092	16.0	0.1	0.019	15.0	0.1	1.5	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_Crp_2	PF13545.1	gi|15922021|ref|NP_377690.1|	-	0.011	15.5	0.0	0.033	13.9	0.0	1.7	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
HTH_40	PF14493.1	gi|15922021|ref|NP_377690.1|	-	0.017	15.3	0.5	0.17	12.0	0.1	2.2	1	1	1	2	2	2	0	Helix-turn-helix	domain
Sigma70_r4	PF04545.11	gi|15922021|ref|NP_377690.1|	-	0.018	14.3	0.1	0.04	13.2	0.1	1.7	1	1	0	1	1	1	0	Sigma-70,	region	4
Penicillinase_R	PF03965.11	gi|15922021|ref|NP_377690.1|	-	0.018	15.1	0.2	0.04	14.0	0.1	1.8	1	1	0	1	1	1	0	Penicillinase	repressor
EppA_BapA	PF07268.6	gi|15922021|ref|NP_377690.1|	-	0.02	14.5	1.0	0.028	14.1	0.7	1.4	1	0	0	1	1	1	0	Exported	protein	precursor	(EppA/BapA)
DUF977	PF06163.6	gi|15922021|ref|NP_377690.1|	-	0.022	14.4	0.0	0.36	10.5	0.0	2.0	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF977)
HTH_9	PF08221.6	gi|15922021|ref|NP_377690.1|	-	0.023	14.5	0.4	0.053	13.4	0.1	1.8	2	0	0	2	2	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
HTH_10	PF04967.7	gi|15922021|ref|NP_377690.1|	-	0.029	13.9	0.2	0.061	12.9	0.1	1.5	1	0	0	1	1	1	0	HTH	DNA	binding	domain
HTH_Mga	PF08280.6	gi|15922021|ref|NP_377690.1|	-	0.032	13.9	0.2	0.032	13.9	0.1	2.0	3	0	0	3	3	1	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_3	PF01381.17	gi|15922021|ref|NP_377690.1|	-	0.039	13.7	0.1	0.11	12.3	0.1	1.8	1	0	0	1	1	1	0	Helix-turn-helix
SNF5	PF04855.7	gi|15922021|ref|NP_377690.1|	-	0.04	13.3	0.1	0.061	12.7	0.1	1.3	1	1	0	1	1	1	0	SNF5	/	SMARCB1	/	INI1
DZR	PF12773.2	gi|15922021|ref|NP_377690.1|	-	0.046	13.5	2.8	0.12	12.2	2.0	1.7	1	1	0	1	1	1	0	Double	zinc	ribbon
GerE	PF00196.14	gi|15922021|ref|NP_377690.1|	-	0.047	13.0	1.2	0.075	12.3	0.2	1.8	2	0	0	2	2	1	0	Bacterial	regulatory	proteins,	luxR	family
HTH_DeoR	PF08220.7	gi|15922021|ref|NP_377690.1|	-	0.063	12.8	0.1	0.2	11.2	0.0	1.8	2	0	0	2	2	2	0	DeoR-like	helix-turn-helix	domain
FeoC	PF09012.5	gi|15922021|ref|NP_377690.1|	-	0.071	12.8	3.6	0.2	11.3	0.0	2.5	2	0	0	2	2	2	0	FeoC	like	transcriptional	regulator
HTH_26	PF13443.1	gi|15922021|ref|NP_377690.1|	-	0.097	12.8	0.9	0.21	11.8	0.2	2.0	2	0	0	2	2	1	0	Cro/C1-type	HTH	DNA-binding	domain
HTH_8	PF02954.14	gi|15922021|ref|NP_377690.1|	-	0.1	12.1	0.0	0.22	11.0	0.0	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	Fis	family
HTH_41	PF14502.1	gi|15922021|ref|NP_377690.1|	-	0.13	11.9	0.1	0.26	10.9	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
GntR	PF00392.16	gi|15922021|ref|NP_377690.1|	-	0.14	11.6	0.0	0.33	10.4	0.0	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
CENP-B_N	PF04218.8	gi|15922021|ref|NP_377690.1|	-	0.35	10.3	0.1	0.35	10.3	0.1	2.0	2	0	0	2	2	1	0	CENP-B	N-terminal	DNA-binding	domain
ATPase-cat_bd	PF12156.3	gi|15922021|ref|NP_377690.1|	-	0.57	10.7	5.4	0.2	12.2	1.5	2.0	3	0	0	3	3	1	0	Putative	metal-binding	domain	of	cation	transport	ATPase
LIM	PF00412.17	gi|15922021|ref|NP_377690.1|	-	0.65	10.1	7.2	0.2	11.7	2.8	1.9	2	0	0	2	2	1	0	LIM	domain
Zn_ribbon_recom	PF13408.1	gi|15922021|ref|NP_377690.1|	-	1.2	9.4	7.1	3.4	8.0	4.9	1.7	1	0	0	1	1	1	0	Recombinase	zinc	beta	ribbon	domain
zf-BED	PF02892.10	gi|15922021|ref|NP_377690.1|	-	2.3	8.0	8.5	0.47	10.2	0.2	2.4	1	1	1	2	2	2	0	BED	zinc	finger
SSV1_ORF_D-335	PF07935.6	gi|15922022|ref|NP_377691.1|	-	5.3e-24	83.7	1.5	6.5e-24	83.4	1.1	1.1	1	0	0	1	1	1	1	ORF	D-335-like	protein
Cytokin-bind	PF09265.5	gi|15922022|ref|NP_377691.1|	-	0.11	11.5	0.0	0.13	11.3	0.0	1.1	1	0	0	1	1	1	0	Cytokinin	dehydrogenase	1,	FAD	and	cytokinin	binding
DEDD_Tnp_IS110	PF01548.12	gi|15922025|ref|NP_377694.1|	-	5.8e-36	123.3	0.0	1.3e-35	122.2	0.0	1.6	2	0	0	2	2	2	1	Transposase
Transposase_20	PF02371.11	gi|15922025|ref|NP_377694.1|	-	3e-11	43.2	0.1	5.5e-11	42.4	0.0	1.4	1	0	0	1	1	1	1	Transposase	IS116/IS110/IS902	family
HHH_5	PF14520.1	gi|15922025|ref|NP_377694.1|	-	0.0057	16.8	0.2	0.025	14.7	0.1	2.2	1	1	0	1	1	1	1	Helix-hairpin-helix	domain
HHH	PF00633.18	gi|15922025|ref|NP_377694.1|	-	0.0092	15.6	0.2	0.028	14.1	0.2	1.9	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
Peptidase_S48	PF03574.10	gi|15922025|ref|NP_377694.1|	-	0.02	14.8	0.2	0.041	13.8	0.1	1.5	1	0	0	1	1	1	0	Peptidase	family	S48
WLM	PF08325.5	gi|15922025|ref|NP_377694.1|	-	0.038	13.8	0.0	0.077	12.8	0.0	1.6	1	0	0	1	1	1	0	WLM	domain
FlgN	PF05130.7	gi|15922025|ref|NP_377694.1|	-	0.069	13.4	10.8	0.053	13.7	5.7	2.1	2	1	0	2	2	2	0	FlgN	protein
FliT	PF05400.8	gi|15922025|ref|NP_377694.1|	-	0.077	13.4	5.9	0.097	13.0	3.3	1.8	1	1	0	1	1	1	0	Flagellar	protein	FliT
PspB	PF06667.7	gi|15922025|ref|NP_377694.1|	-	1.2	9.1	4.6	4.1	7.3	0.9	2.7	2	1	1	3	3	3	0	Phage	shock	protein	B
Transposase_20	PF02371.11	gi|15922027|ref|NP_377696.1|	-	0.038	14.0	0.9	0.059	13.4	0.0	1.8	3	0	0	3	3	3	0	Transposase	IS116/IS110/IS902	family
SF3a60_bindingd	PF12108.3	gi|15922027|ref|NP_377696.1|	-	0.072	12.6	0.8	0.14	11.7	0.3	1.7	2	0	0	2	2	2	0	Splicing	factor	SF3a60	binding	domain
DUF3792	PF12670.2	gi|15922031|ref|NP_377700.1|	-	0.0032	17.3	1.0	0.0032	17.3	0.7	1.7	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF3792)
Phenol_MetA_deg	PF13557.1	gi|15922033|ref|NP_377702.1|	-	0.049	13.4	1.6	0.071	12.9	1.1	1.2	1	0	0	1	1	1	0	Putative	MetA-pathway	of	phenol	degradation
Gram_pos_anchor	PF00746.16	gi|15922034|ref|NP_377703.1|	-	6.1	6.7	8.2	1.8	8.4	0.9	2.3	2	0	0	2	2	2	0	Gram	positive	anchor
DUF217	PF02697.9	gi|15922036|ref|NP_377705.1|	-	6.1e-06	26.3	8.6	6.8e-06	26.2	6.0	1.0	1	0	0	1	1	1	1	Uncharacterized	ACR,	COG1753
VP9	PF09625.5	gi|15922036|ref|NP_377705.1|	-	0.028	14.2	1.2	0.035	13.9	0.8	1.3	1	0	0	1	1	1	0	VP9	protein
RHH_1	PF01402.16	gi|15922036|ref|NP_377705.1|	-	0.045	13.6	0.6	0.045	13.6	0.4	2.7	3	1	0	3	3	3	0	Ribbon-helix-helix	protein,	copG	family
Leucyl-specific	PF14795.1	gi|15922036|ref|NP_377705.1|	-	0.18	11.6	1.0	1.2	9.0	0.7	2.3	1	1	0	1	1	1	0	Leucine-tRNA	synthetase-specific	domain
DUF3782	PF12644.2	gi|15922036|ref|NP_377705.1|	-	3.3	7.5	5.0	5.4	6.8	3.5	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3782)
ABC_tran	PF00005.22	gi|15922040|ref|NP_377709.1|	-	9.1e-22	77.8	0.0	1.2e-21	77.4	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|15922040|ref|NP_377709.1|	-	9.8e-12	45.4	3.4	3e-10	40.5	2.4	2.1	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|15922040|ref|NP_377709.1|	-	2.9e-06	26.6	0.2	0.00044	19.5	0.2	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|15922040|ref|NP_377709.1|	-	3.1e-05	23.1	1.0	0.057	12.4	0.8	2.1	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA_29	PF13555.1	gi|15922040|ref|NP_377709.1|	-	7.3e-05	22.2	0.1	0.00012	21.5	0.1	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|15922040|ref|NP_377709.1|	-	0.0005	20.4	0.0	0.00062	20.1	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|15922040|ref|NP_377709.1|	-	0.0043	16.7	0.1	0.012	15.3	0.0	1.7	2	0	0	2	2	1	1	Part	of	AAA	domain
NACHT	PF05729.7	gi|15922040|ref|NP_377709.1|	-	0.018	14.6	0.2	0.032	13.8	0.1	1.4	1	0	0	1	1	1	0	NACHT	domain
T2SE	PF00437.15	gi|15922040|ref|NP_377709.1|	-	0.026	13.4	0.4	0.043	12.7	0.3	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
Pox_A32	PF04665.7	gi|15922040|ref|NP_377709.1|	-	0.044	13.0	0.3	0.11	11.8	0.1	1.7	2	0	0	2	2	2	0	Poxvirus	A32	protein
AAA_16	PF13191.1	gi|15922040|ref|NP_377709.1|	-	0.05	13.5	0.1	0.29	11.0	0.1	1.9	2	0	0	2	2	2	0	AAA	ATPase	domain
G-alpha	PF00503.15	gi|15922040|ref|NP_377709.1|	-	0.052	12.2	0.1	0.094	11.3	0.1	1.4	1	0	0	1	1	1	0	G-protein	alpha	subunit
DAP3	PF10236.4	gi|15922040|ref|NP_377709.1|	-	0.094	11.6	1.2	0.12	11.2	0.3	1.5	2	0	0	2	2	2	0	Mitochondrial	ribosomal	death-associated	protein	3
MobB	PF03205.9	gi|15922040|ref|NP_377709.1|	-	0.099	12.3	0.1	0.24	11.0	0.0	1.7	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NTPase_1	PF03266.10	gi|15922040|ref|NP_377709.1|	-	0.11	12.2	0.0	0.4	10.3	0.0	2.0	3	0	0	3	3	3	0	NTPase
PduV-EutP	PF10662.4	gi|15922040|ref|NP_377709.1|	-	0.13	11.7	0.3	0.28	10.6	0.2	1.5	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
Zeta_toxin	PF06414.7	gi|15922040|ref|NP_377709.1|	-	0.14	11.2	0.1	0.47	9.5	0.0	1.9	3	0	0	3	3	3	0	Zeta	toxin
AAA_5	PF07728.9	gi|15922040|ref|NP_377709.1|	-	0.15	11.7	0.2	1	9.1	0.1	2.2	2	1	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
DUF258	PF03193.11	gi|15922040|ref|NP_377709.1|	-	0.17	11.0	0.4	0.29	10.3	0.3	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
cobW	PF02492.14	gi|15922040|ref|NP_377709.1|	-	0.18	11.2	0.3	0.34	10.3	0.2	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
Glyco_hydro_66	PF13199.1	gi|15922042|ref|NP_377711.1|	-	0.004	15.6	0.2	0.0055	15.1	0.1	1.2	1	0	0	1	1	1	1	Glycosyl	hydrolase	family	66
DUF929	PF06053.6	gi|15922043|ref|NP_377712.1|	-	1.9e-81	272.8	9.3	2.2e-81	272.6	6.5	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF929)
ABC2_membrane_2	PF12679.2	gi|15922044|ref|NP_377713.1|	-	3.9e-16	58.7	12.4	1.6e-15	56.7	8.6	1.9	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
CarboxypepD_reg	PF13620.1	gi|15922044|ref|NP_377713.1|	-	4.8e-07	29.7	0.1	1.2e-06	28.4	0.1	1.6	1	0	0	1	1	1	1	Carboxypeptidase	regulatory-like	domain
DUF4480	PF13715.1	gi|15922044|ref|NP_377713.1|	-	8.7e-06	25.7	0.1	2.1e-05	24.4	0.1	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4480)
ABC2_membrane_4	PF12730.2	gi|15922044|ref|NP_377713.1|	-	0.0011	18.2	62.2	0.016	14.3	34.6	2.5	2	1	0	2	2	2	2	ABC-2	family	transporter	protein
ABC_tran	PF00005.22	gi|15922045|ref|NP_377714.1|	-	6.2e-25	88.0	0.0	1.4e-24	86.9	0.0	1.6	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|15922045|ref|NP_377714.1|	-	5.7e-12	46.1	0.1	1.7e-11	44.6	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
Ribosomal_L10	PF00466.15	gi|15922045|ref|NP_377714.1|	-	0.00096	19.0	0.4	0.086	12.7	0.2	2.7	3	0	0	3	3	3	1	Ribosomal	protein	L10
UMPH-1	PF05822.7	gi|15922045|ref|NP_377714.1|	-	0.023	14.0	0.3	0.13	11.5	0.1	2.0	1	1	1	2	2	2	0	Pyrimidine	5'-nucleotidase	(UMPH-1)
MobB	PF03205.9	gi|15922045|ref|NP_377714.1|	-	0.075	12.7	0.9	0.12	12.0	0.1	1.8	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_23	PF13476.1	gi|15922045|ref|NP_377714.1|	-	0.11	12.7	5.4	0.21	11.9	3.6	1.9	1	1	0	1	1	1	0	AAA	domain
SRP54	PF00448.17	gi|15922045|ref|NP_377714.1|	-	0.13	11.6	5.9	0.19	11.1	0.3	2.4	3	0	0	3	3	3	0	SRP54-type	protein,	GTPase	domain
ABC2_membrane_2	PF12679.2	gi|15922046|ref|NP_377715.1|	-	2.3e-22	79.1	4.3	2.3e-22	79.1	3.0	2.0	1	1	0	2	2	2	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|15922046|ref|NP_377715.1|	-	0.0036	16.4	55.6	0.38	9.8	38.5	2.5	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_3	PF12698.2	gi|15922046|ref|NP_377715.1|	-	0.34	9.9	47.0	0.66	8.9	32.6	1.6	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
Peptidase_S9	PF00326.16	gi|15922047|ref|NP_377716.1|	-	1.9e-43	148.1	0.0	3.2e-43	147.4	0.0	1.4	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
Abhydrolase_6	PF12697.2	gi|15922047|ref|NP_377716.1|	-	2e-14	54.0	0.0	2.7e-13	50.3	0.0	2.1	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_5	PF12695.2	gi|15922047|ref|NP_377716.1|	-	5.5e-13	48.8	0.0	9.3e-13	48.1	0.0	1.4	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
DLH	PF01738.13	gi|15922047|ref|NP_377716.1|	-	1.6e-11	43.9	0.0	8.2e-11	41.5	0.0	2.1	1	1	0	1	1	1	1	Dienelactone	hydrolase	family
BAAT_C	PF08840.6	gi|15922047|ref|NP_377716.1|	-	7.7e-08	32.3	0.0	9e-06	25.5	0.0	2.3	1	1	0	1	1	1	1	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
Abhydrolase_1	PF00561.15	gi|15922047|ref|NP_377716.1|	-	1.6e-05	24.5	0.1	0.0016	18.0	0.1	2.8	2	1	1	3	3	3	1	alpha/beta	hydrolase	fold
Peptidase_S15	PF02129.13	gi|15922047|ref|NP_377716.1|	-	7.7e-05	22.2	0.0	0.026	13.9	0.0	2.5	1	1	1	2	2	2	2	X-Pro	dipeptidyl-peptidase	(S15	family)
Esterase	PF00756.15	gi|15922047|ref|NP_377716.1|	-	0.00039	19.9	0.0	0.0008	18.9	0.0	1.6	2	0	0	2	2	2	1	Putative	esterase
Abhydrolase_3	PF07859.8	gi|15922047|ref|NP_377716.1|	-	0.00073	19.1	0.0	0.0042	16.6	0.0	2.1	1	1	0	1	1	1	1	alpha/beta	hydrolase	fold
Abhydrolase_4	PF08386.5	gi|15922047|ref|NP_377716.1|	-	0.003	17.4	0.0	0.0078	16.0	0.0	1.6	1	0	0	1	1	1	1	TAP-like	protein
AXE1	PF05448.7	gi|15922047|ref|NP_377716.1|	-	0.0048	15.4	0.0	0.016	13.6	0.0	1.8	1	1	0	1	1	1	1	Acetyl	xylan	esterase	(AXE1)
DUF2048	PF09752.4	gi|15922047|ref|NP_377716.1|	-	0.0092	14.8	0.0	0.024	13.5	0.0	1.6	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2048)
Peptidase_S28	PF05577.7	gi|15922047|ref|NP_377716.1|	-	0.019	13.5	0.0	0.031	12.8	0.0	1.2	1	0	0	1	1	1	0	Serine	carboxypeptidase	S28
UPF0227	PF05728.7	gi|15922047|ref|NP_377716.1|	-	0.031	13.9	0.0	0.067	12.9	0.0	1.5	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0227)
DUF829	PF05705.9	gi|15922047|ref|NP_377716.1|	-	0.12	12.0	0.0	0.22	11.2	0.0	1.4	1	0	0	1	1	1	0	Eukaryotic	protein	of	unknown	function	(DUF829)
Tannase	PF07519.6	gi|15922047|ref|NP_377716.1|	-	0.12	11.0	0.0	0.28	9.8	0.0	1.5	1	0	0	1	1	1	0	Tannase	and	feruloyl	esterase
Abhydrolase_2	PF02230.11	gi|15922047|ref|NP_377716.1|	-	0.13	11.6	0.0	3.1	7.1	0.0	2.5	2	0	0	2	2	2	0	Phospholipase/Carboxylesterase
PhoPQ_related	PF10142.4	gi|15922047|ref|NP_377716.1|	-	0.17	10.3	0.1	2.3	6.6	0.0	2.4	2	1	1	3	3	3	0	PhoPQ-activated	pathogenicity-related	protein
DUF4467	PF14729.1	gi|15922047|ref|NP_377716.1|	-	0.57	10.5	6.0	0.27	11.5	0.9	2.9	2	1	1	3	3	3	0	Domain	of	unknown	function	with	cystatin-like	fold	(DUF4467)
Arch_ATPase	PF01637.13	gi|15922048|ref|NP_377717.1|	-	8.7e-26	91.0	3.0	3.3e-25	89.1	2.1	1.8	1	1	0	1	1	1	1	Archaeal	ATPase
AAA_14	PF13173.1	gi|15922048|ref|NP_377717.1|	-	1.2e-09	38.1	0.2	0.00015	21.6	0.1	2.5	1	1	1	2	2	2	2	AAA	domain
AAA_16	PF13191.1	gi|15922048|ref|NP_377717.1|	-	1.2e-06	28.6	0.1	3.3e-06	27.2	0.0	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_35	PF14516.1	gi|15922048|ref|NP_377717.1|	-	1.6e-05	23.7	1.4	0.0062	15.2	0.5	2.3	1	1	1	2	2	2	2	AAA-like	domain
AAA_22	PF13401.1	gi|15922048|ref|NP_377717.1|	-	0.0015	18.7	0.2	0.046	13.8	0.1	2.6	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|15922048|ref|NP_377717.1|	-	0.0096	16.1	0.1	0.058	13.5	0.1	2.2	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
YhfT	PF10797.4	gi|15922048|ref|NP_377717.1|	-	0.12	11.1	0.0	0.21	10.3	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function
PaREP1	PF05942.6	gi|15922050|ref|NP_377719.1|	-	7e-21	74.2	4.4	7e-21	74.2	3.1	1.6	2	0	0	2	2	2	1	Archaeal	PaREP1/PaREP8	family
DUF357	PF04010.8	gi|15922050|ref|NP_377719.1|	-	7.2e-05	22.4	0.1	0.00021	20.9	0.0	1.9	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF357)
HEPN	PF05168.9	gi|15922050|ref|NP_377719.1|	-	0.0077	16.1	2.1	0.0088	15.9	0.5	1.8	2	0	0	2	2	2	1	HEPN	domain
ComZ	PF10815.3	gi|15922050|ref|NP_377719.1|	-	0.0092	15.7	1.3	0.017	14.8	0.1	1.8	2	0	0	2	2	2	1	ComZ
DUF4398	PF14346.1	gi|15922050|ref|NP_377719.1|	-	0.1	12.6	2.7	0.18	11.8	1.5	1.8	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4398)
HTH_45	PF14947.1	gi|15922051|ref|NP_377720.1|	-	2.8e-05	23.8	1.1	6.5e-05	22.6	0.2	1.9	2	0	0	2	2	2	1	Winged	helix-turn-helix
HTH_27	PF13463.1	gi|15922051|ref|NP_377720.1|	-	0.00021	21.5	0.1	0.00042	20.5	0.0	1.5	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_34	PF13601.1	gi|15922051|ref|NP_377720.1|	-	0.00096	19.1	0.1	0.0027	17.7	0.1	1.8	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|15922051|ref|NP_377720.1|	-	0.0066	16.0	0.0	0.011	15.4	0.0	1.3	1	0	0	1	1	1	1	MarR	family
DUF4423	PF14394.1	gi|15922051|ref|NP_377720.1|	-	0.015	14.8	0.1	0.032	13.7	0.1	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
PCI	PF01399.22	gi|15922051|ref|NP_377720.1|	-	0.02	15.1	0.0	0.097	12.9	0.0	1.8	1	1	1	2	2	2	0	PCI	domain
RepL	PF05732.6	gi|15922051|ref|NP_377720.1|	-	0.062	12.5	0.1	0.067	12.3	0.1	1.3	1	0	0	1	1	1	0	Firmicute	plasmid	replication	protein	(RepL)
HRDC	PF00570.18	gi|15922051|ref|NP_377720.1|	-	0.065	12.9	0.1	0.2	11.3	0.0	1.9	3	0	0	3	3	3	0	HRDC	domain
HTH_Tnp_ISL3	PF13542.1	gi|15922051|ref|NP_377720.1|	-	0.072	12.2	0.0	1.5	8.0	0.0	2.1	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_Crp_2	PF13545.1	gi|15922051|ref|NP_377720.1|	-	0.084	12.6	0.0	0.21	11.4	0.0	1.6	2	0	0	2	2	2	0	Crp-like	helix-turn-helix	domain
SpoU_sub_bind	PF08032.7	gi|15922051|ref|NP_377720.1|	-	0.12	12.5	0.1	0.44	10.7	0.1	1.8	2	0	0	2	2	2	0	RNA	2'-O	ribose	methyltransferase	substrate	binding
DUF998	PF06197.8	gi|15922052|ref|NP_377721.1|	-	7e-31	106.9	15.4	8e-31	106.7	10.7	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF998)
Dpy19	PF10034.4	gi|15922052|ref|NP_377721.1|	-	2	6.4	5.7	16	3.5	0.0	2.0	2	0	0	2	2	2	0	Q-cell	neuroblast	polarisation
Cas_APE2256	PF09651.5	gi|15922053|ref|NP_377722.1|	-	3e-34	117.6	0.3	6.2e-34	116.6	0.2	1.5	1	0	0	1	1	1	1	CRISPR-associated	protein	(Cas_APE2256)
DUF3139	PF11337.3	gi|15922053|ref|NP_377722.1|	-	0.023	14.9	0.8	0.098	12.9	0.6	2.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3139)
Scm3	PF10384.4	gi|15922053|ref|NP_377722.1|	-	0.025	14.0	0.2	0.78	9.2	0.0	2.5	2	0	0	2	2	2	0	Centromere	protein	Scm3
Tox-PL-2	PF15643.1	gi|15922053|ref|NP_377722.1|	-	0.03	14.3	0.5	0.1	12.6	0.0	2.2	3	0	0	3	3	3	0	Papain	fold	toxin	2
Death	PF00531.17	gi|15922053|ref|NP_377722.1|	-	0.037	13.8	0.1	0.077	12.7	0.1	1.6	1	0	0	1	1	1	0	Death	domain
Cas_Cas02710	PF09670.5	gi|15922053|ref|NP_377722.1|	-	0.071	11.7	0.0	0.12	11.0	0.0	1.4	1	0	0	1	1	1	0	CRISPR-associated	protein	(Cas_Cas02710)
SBP_bac_5	PF00496.17	gi|15922053|ref|NP_377722.1|	-	0.091	11.5	0.0	0.13	11.1	0.0	1.2	1	0	0	1	1	1	0	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
Thioredoxin_8	PF13905.1	gi|15922053|ref|NP_377722.1|	-	0.21	11.7	1.3	3.7	7.7	0.1	2.6	1	1	1	2	2	2	0	Thioredoxin-like
SWIM	PF04434.12	gi|15922054|ref|NP_377723.1|	-	1.4e-05	24.4	0.5	2.6e-05	23.5	0.4	1.5	1	0	0	1	1	1	1	SWIM	zinc	finger
TPR_19	PF14559.1	gi|15922054|ref|NP_377723.1|	-	0.011	16.0	0.1	0.16	12.2	0.0	2.4	2	0	0	2	2	2	0	Tetratricopeptide	repeat
DUF3782	PF12644.2	gi|15922054|ref|NP_377723.1|	-	0.049	13.4	0.0	0.23	11.2	0.0	2.2	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3782)
SPOB_a	PF14689.1	gi|15922054|ref|NP_377723.1|	-	0.36	10.4	6.4	0.15	11.6	0.4	3.5	4	1	0	4	4	4	0	Sensor_kinase_SpoOB-type,	alpha-helical	domain
Peptidase_S9	PF00326.16	gi|15922055|ref|NP_377724.1|	-	3.4e-42	144.0	0.0	5e-42	143.5	0.0	1.3	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
Abhydrolase_5	PF12695.2	gi|15922055|ref|NP_377724.1|	-	2.1e-14	53.5	0.0	3.5e-14	52.7	0.0	1.4	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_6	PF12697.2	gi|15922055|ref|NP_377724.1|	-	1.2e-12	48.2	0.0	1e-11	45.1	0.0	2.0	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
DLH	PF01738.13	gi|15922055|ref|NP_377724.1|	-	4e-07	29.5	0.0	0.0027	17.0	0.0	2.1	2	0	0	2	2	2	2	Dienelactone	hydrolase	family
Abhydrolase_1	PF00561.15	gi|15922055|ref|NP_377724.1|	-	1.1e-05	25.1	0.8	0.011	15.3	0.2	2.3	1	1	1	2	2	2	2	alpha/beta	hydrolase	fold
Peptidase_S15	PF02129.13	gi|15922055|ref|NP_377724.1|	-	1.4e-05	24.6	0.3	0.033	13.6	0.4	2.2	1	1	1	2	2	2	2	X-Pro	dipeptidyl-peptidase	(S15	family)
BAAT_C	PF08840.6	gi|15922055|ref|NP_377724.1|	-	0.0088	15.7	0.0	0.65	9.6	0.0	2.3	2	0	0	2	2	2	1	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
PhoPQ_related	PF10142.4	gi|15922055|ref|NP_377724.1|	-	0.014	13.8	0.1	0.025	13.0	0.1	1.3	1	0	0	1	1	1	0	PhoPQ-activated	pathogenicity-related	protein
YmzC	PF14157.1	gi|15922055|ref|NP_377724.1|	-	0.038	13.8	0.2	0.098	12.4	0.1	1.7	1	0	0	1	1	1	0	YmzC-like	protein
Abhydrolase_2	PF02230.11	gi|15922055|ref|NP_377724.1|	-	0.085	12.2	0.1	8.8	5.6	0.0	2.4	2	0	0	2	2	2	0	Phospholipase/Carboxylesterase
Peptidase_M1	PF01433.15	gi|15922056|ref|NP_377725.1|	-	2.4e-105	352.8	0.2	3.8e-105	352.1	0.1	1.3	1	0	0	1	1	1	1	Peptidase	family	M1
Peptidase_MA_2	PF13485.1	gi|15922056|ref|NP_377725.1|	-	4.7e-18	65.4	0.4	9.4e-18	64.4	0.3	1.5	1	0	0	1	1	1	1	Peptidase	MA	superfamily
ERAP1_C	PF11838.3	gi|15922056|ref|NP_377725.1|	-	5.6e-14	52.1	1.8	1.3e-13	50.9	0.3	2.3	2	1	0	2	2	2	1	ERAP1-like	C-terminal	domain
PaREP1	PF05942.6	gi|15922057|ref|NP_377726.1|	-	1.1e-17	63.9	1.5	1.2e-17	63.7	1.0	1.0	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
DUF269	PF03270.8	gi|15922057|ref|NP_377726.1|	-	0.068	13.1	0.1	0.14	12.1	0.0	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function,	DUF269
DUF2895	PF11444.3	gi|15922057|ref|NP_377726.1|	-	0.12	11.5	0.2	0.14	11.3	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2895)
PaREP1	PF05942.6	gi|15922058|ref|NP_377727.1|	-	4.7e-26	90.9	1.4	5.5e-26	90.6	1.0	1.1	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
HEPN	PF05168.9	gi|15922058|ref|NP_377727.1|	-	0.00021	21.1	1.9	0.00052	19.8	1.3	1.7	1	1	0	1	1	1	1	HEPN	domain
DUF357	PF04010.8	gi|15922058|ref|NP_377727.1|	-	0.00022	20.8	0.6	0.079	12.6	0.0	2.7	2	1	0	2	2	2	2	Protein	of	unknown	function	(DUF357)
TPR_11	PF13414.1	gi|15922058|ref|NP_377727.1|	-	0.05	13.2	1.6	0.09	12.4	1.1	1.6	1	1	0	1	1	1	0	TPR	repeat
Vps23_core	PF09454.5	gi|15922058|ref|NP_377727.1|	-	0.11	12.0	0.0	0.48	10.0	0.0	2.0	2	1	0	2	2	2	0	Vps23	core	domain
DUF4398	PF14346.1	gi|15922058|ref|NP_377727.1|	-	0.26	11.3	4.7	0.64	10.0	3.3	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4398)
MIT	PF04212.13	gi|15922058|ref|NP_377727.1|	-	0.6	10.0	4.1	0.41	10.5	1.7	1.6	2	0	0	2	2	2	0	MIT	(microtubule	interacting	and	transport)	domain
Arylesterase	PF01731.15	gi|15922059|ref|NP_377728.1|	-	1e-15	57.4	18.8	0.0024	17.7	0.1	7.3	2	2	4	7	7	7	5	Arylesterase
NHL	PF01436.16	gi|15922059|ref|NP_377728.1|	-	8.5e-15	53.8	10.6	0.17	11.9	0.1	7.4	7	0	0	7	7	7	5	NHL	repeat
Lactonase	PF10282.4	gi|15922059|ref|NP_377728.1|	-	5.2e-10	38.9	0.9	0.00037	19.6	0.3	3.3	1	1	0	2	2	2	2	Lactonase,	7-bladed	beta-propeller
SGL	PF08450.7	gi|15922059|ref|NP_377728.1|	-	7.8e-08	31.9	0.3	0.2	10.9	0.0	4.1	1	1	3	5	5	5	4	SMP-30/Gluconolaconase/LRE-like	region
Me-amine-dh_H	PF06433.6	gi|15922059|ref|NP_377728.1|	-	0.00072	18.2	0.4	0.14	10.7	0.0	3.6	1	1	3	4	4	4	1	Methylamine	dehydrogenase	heavy	chain	(MADH)
MRJP	PF03022.11	gi|15922059|ref|NP_377728.1|	-	0.0055	15.9	6.4	4.5	6.4	0.2	5.3	1	1	5	6	6	6	1	Major	royal	jelly	protein
zf-SAP30	PF13866.1	gi|15922059|ref|NP_377728.1|	-	0.11	12.1	0.0	10	5.8	0.0	3.0	1	1	1	2	2	2	0	SAP30	zinc-finger
FlaG	PF03646.10	gi|15922059|ref|NP_377728.1|	-	0.31	11.2	11.2	33	4.6	0.1	5.7	6	0	0	6	6	6	0	FlaG	protein
HEV_ORF1	PF02444.11	gi|15922059|ref|NP_377728.1|	-	0.32	11.1	2.8	5.5	7.2	0.1	3.7	1	1	3	5	5	5	0	Hepatitis	E	virus	ORF-2	(Putative	capsid	protein)
TMEM154	PF15102.1	gi|15922059|ref|NP_377728.1|	-	0.54	9.9	4.0	1.3	8.7	2.8	1.7	1	0	0	1	1	1	0	TMEM154	protein	family
He_PIG	PF05345.7	gi|15922059|ref|NP_377728.1|	-	3.4	7.7	24.9	9.2	6.3	1.1	6.4	4	2	3	7	7	6	0	Putative	Ig	domain
DUF4097	PF13349.1	gi|15922060|ref|NP_377729.1|	-	7.4e-09	35.3	10.5	1.5e-08	34.3	7.3	1.5	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4097)
DUF4098	PF13345.1	gi|15922060|ref|NP_377729.1|	-	9.4e-08	31.9	3.0	8.7e-07	28.8	1.9	2.1	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4098)
DUF3971	PF13116.1	gi|15922060|ref|NP_377729.1|	-	0.01	15.2	0.1	0.016	14.5	0.0	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function
DUF2807	PF10988.3	gi|15922060|ref|NP_377729.1|	-	0.017	14.6	0.4	0.033	13.7	0.3	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2807)
AP3B1_C	PF14796.1	gi|15922060|ref|NP_377729.1|	-	0.12	12.0	0.4	0.27	10.9	0.3	1.5	1	1	0	1	1	1	0	Clathrin-adaptor	complex-3	beta-1	subunit	C-terminal
DUF4098	PF13345.1	gi|15922061|ref|NP_377730.1|	-	8.9e-22	76.8	19.7	1.7e-09	37.4	0.9	3.3	2	1	2	4	4	4	4	Domain	of	unknown	function	(DUF4098)
DUF2276	PF10040.4	gi|15922062|ref|NP_377731.1|	-	5.5e-24	84.6	0.0	9.7e-24	83.9	0.0	1.4	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2276)
Apolipoprotein	PF01442.13	gi|15922063|ref|NP_377732.1|	-	1.1e-13	51.1	19.5	5.6e-11	42.3	4.6	2.3	1	1	1	2	2	2	2	Apolipoprotein	A1/A4/E	domain
Fzo_mitofusin	PF04799.8	gi|15922063|ref|NP_377732.1|	-	1.2e-05	24.7	13.5	0.18	11.1	0.6	3.9	1	1	2	3	3	3	3	fzo-like	conserved	region
Baculo_PEP_C	PF04513.7	gi|15922063|ref|NP_377732.1|	-	0.00016	21.5	12.9	0.034	13.9	5.0	3.5	1	1	1	2	2	2	2	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
DUF883	PF05957.8	gi|15922063|ref|NP_377732.1|	-	0.00087	19.6	15.5	0.05	13.9	1.4	3.8	1	1	5	6	6	6	4	Bacterial	protein	of	unknown	function	(DUF883)
Gp58	PF07902.6	gi|15922063|ref|NP_377732.1|	-	0.0028	15.9	13.6	0.012	13.8	9.4	1.8	1	1	0	1	1	1	1	gp58-like	protein
UPF0102	PF02021.12	gi|15922063|ref|NP_377732.1|	-	0.014	15.2	0.6	0.079	12.8	0.1	2.4	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0102
DUF4143	PF13635.1	gi|15922063|ref|NP_377732.1|	-	0.015	15.4	9.0	0.026	14.7	6.2	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4143)
NERD	PF08378.6	gi|15922063|ref|NP_377732.1|	-	0.019	15.2	1.8	0.034	14.4	0.2	2.2	1	1	0	2	2	2	0	Nuclease-related	domain
Prominin	PF05478.6	gi|15922063|ref|NP_377732.1|	-	0.04	11.4	13.6	0.26	8.7	9.5	1.4	1	1	0	1	1	1	0	Prominin
SF-assemblin	PF06705.6	gi|15922063|ref|NP_377732.1|	-	0.05	12.7	30.9	0.16	11.1	20.6	2.2	1	1	1	2	2	2	0	SF-assemblin/beta	giardin
OmpH	PF03938.9	gi|15922063|ref|NP_377732.1|	-	0.08	12.8	21.1	0.39	10.6	6.6	2.9	2	1	1	3	3	3	0	Outer	membrane	protein	(OmpH-like)
Phe_tRNA-synt_N	PF02912.13	gi|15922063|ref|NP_377732.1|	-	0.14	11.8	29.3	0.87	9.3	1.2	5.5	2	1	3	5	5	5	0	Aminoacyl	tRNA	synthetase	class	II,	N-terminal	domain
Lectin_N	PF03954.9	gi|15922063|ref|NP_377732.1|	-	0.15	11.4	13.4	1.5	8.2	1.8	3.3	2	1	1	3	3	3	0	Hepatic	lectin,	N-terminal	domain
ApoLp-III	PF07464.6	gi|15922063|ref|NP_377732.1|	-	0.42	10.6	26.8	0.39	10.7	15.9	2.8	1	1	0	2	2	2	0	Apolipophorin-III	precursor	(apoLp-III)
Sds3	PF08598.6	gi|15922063|ref|NP_377732.1|	-	0.48	9.9	24.4	0.92	8.9	6.1	2.7	1	1	1	2	2	2	0	Sds3-like
DUF4407	PF14362.1	gi|15922063|ref|NP_377732.1|	-	0.95	8.3	15.4	1.6	7.6	10.7	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
hDGE_amylase	PF14701.1	gi|15922063|ref|NP_377732.1|	-	1.3	7.8	13.6	2.7	6.7	9.2	1.6	1	1	0	1	1	1	0	glucanotransferase	domain	of	human	glycogen	debranching	enzyme
CsbD	PF05532.7	gi|15922063|ref|NP_377732.1|	-	1.4	8.7	10.9	0.41	10.3	1.2	2.9	2	0	0	2	2	2	0	CsbD-like
DUF1664	PF07889.7	gi|15922063|ref|NP_377732.1|	-	2.2	8.0	27.5	1.6	8.5	4.3	3.9	1	1	3	4	4	4	0	Protein	of	unknown	function	(DUF1664)
Vps54	PF07928.7	gi|15922063|ref|NP_377732.1|	-	2.5	8.2	5.7	17	5.5	0.2	3.5	1	1	2	4	4	4	0	Vps54-like	protein
TraH	PF06122.6	gi|15922063|ref|NP_377732.1|	-	3.1	6.5	5.0	0.89	8.2	0.0	2.1	1	1	1	2	2	2	0	Conjugative	relaxosome	accessory	transposon	protein
ATP-synt_B	PF00430.13	gi|15922063|ref|NP_377732.1|	-	3.3	7.5	25.3	10	5.9	5.2	3.7	1	1	2	3	3	3	0	ATP	synthase	B/B'	CF(0)
DUF3395	PF11875.3	gi|15922063|ref|NP_377732.1|	-	3.5	7.2	17.2	0.04	13.5	1.4	3.2	2	1	0	3	3	3	0	Domain	of	unknown	function	(DUF3395)
DUF1640	PF07798.6	gi|15922063|ref|NP_377732.1|	-	4	7.4	31.7	0.59	10.1	9.9	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1640)
Brr6_like_C_C	PF10104.4	gi|15922063|ref|NP_377732.1|	-	4.2	6.9	12.8	6.3	6.3	0.7	4.3	1	1	6	7	7	7	0	Di-sulfide	bridge	nucleocytoplasmic	transport	domain
GAS	PF13851.1	gi|15922063|ref|NP_377732.1|	-	4.4	6.4	31.9	0.27	10.4	10.8	3.0	1	1	1	3	3	3	0	Growth-arrest	specific	micro-tubule	binding
DUF1451	PF07295.6	gi|15922063|ref|NP_377732.1|	-	9.1	6.0	22.0	8.4	6.1	2.6	4.0	1	1	2	4	4	4	0	Protein	of	unknown	function	(DUF1451)
Tup_N	PF08581.5	gi|15922063|ref|NP_377732.1|	-	9.9	6.4	25.0	16	5.7	1.9	4.7	2	1	2	5	5	5	0	Tup	N-terminal
HEPN	PF05168.9	gi|15922064|ref|NP_377733.1|	-	3.3e-23	81.7	0.3	4e-23	81.5	0.2	1.1	1	0	0	1	1	1	1	HEPN	domain
Acyl_transf_3	PF01757.17	gi|15922065|ref|NP_377734.1|	-	0.019	13.8	3.0	0.11	11.3	2.1	1.9	1	1	0	1	1	1	0	Acyltransferase	family
DUF2929	PF11151.3	gi|15922065|ref|NP_377734.1|	-	0.46	10.6	0.1	0.46	10.6	0.1	2.5	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2929)
PaREP1	PF05942.6	gi|15922066|ref|NP_377735.1|	-	7.3e-26	90.2	0.4	1.1e-25	89.6	0.3	1.3	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
YolD	PF08863.5	gi|15922066|ref|NP_377735.1|	-	0.0042	16.8	0.1	0.9	9.4	0.1	2.5	2	1	0	2	2	2	2	YolD-like	protein
DUF3243	PF11588.3	gi|15922066|ref|NP_377735.1|	-	0.087	12.8	0.0	0.26	11.3	0.0	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3243)
AA_permease_2	PF13520.1	gi|15922067|ref|NP_377736.1|	-	6.4e-28	97.4	66.2	6.4e-28	97.4	45.9	1.6	1	1	1	2	2	2	2	Amino	acid	permease
AA_permease	PF00324.16	gi|15922067|ref|NP_377736.1|	-	2.2e-20	72.4	60.6	3.5e-20	71.8	42.0	1.3	1	1	0	1	1	1	1	Amino	acid	permease
FUSC	PF04632.7	gi|15922067|ref|NP_377736.1|	-	0.0032	15.9	4.1	0.0032	15.9	2.9	2.6	3	0	0	3	3	3	2	Fusaric	acid	resistance	protein	family
NTP_transf_2	PF01909.18	gi|15922068|ref|NP_377737.1|	-	8.1e-10	38.9	1.8	9.4e-10	38.6	1.2	1.2	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
Adenyl_cycl_N	PF12633.2	gi|15922068|ref|NP_377737.1|	-	0.12	11.8	0.0	0.13	11.8	0.0	1.1	1	0	0	1	1	1	0	Adenylate	cyclase	NT	domain
L-fibroin	PF05849.6	gi|15922068|ref|NP_377737.1|	-	0.13	11.6	0.4	0.21	10.8	0.2	1.4	2	0	0	2	2	2	0	Fibroin	light	chain	(L-fibroin)
HEPN	PF05168.9	gi|15922069|ref|NP_377738.1|	-	1.3e-23	83.1	0.1	1.5e-23	82.9	0.1	1.0	1	0	0	1	1	1	1	HEPN	domain
DUF4508	PF14969.1	gi|15922070|ref|NP_377739.1|	-	0.16	11.9	1.3	4.4	7.3	0.1	2.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4508)
DUF3782	PF12644.2	gi|15922071|ref|NP_377740.1|	-	9.1e-37	124.6	35.8	7e-26	89.8	5.9	5.1	1	1	2	3	3	3	3	Protein	of	unknown	function	(DUF3782)
DUF1626	PF07788.6	gi|15922071|ref|NP_377740.1|	-	1.3e-27	95.3	3.0	1.3e-27	95.3	2.1	2.7	2	1	1	3	3	3	1	Protein	of	unknown	function	(DUF1626)
DUF2717	PF10911.3	gi|15922071|ref|NP_377740.1|	-	0.065	12.7	0.9	55	3.3	0.0	4.0	5	0	0	5	5	5	0	Protein	of	unknown	function	(DUF2717)
HC2	PF07382.6	gi|15922071|ref|NP_377740.1|	-	0.87	9.4	8.8	1.3	8.7	6.1	1.3	1	0	0	1	1	1	0	Histone	H1-like	nucleoprotein	HC2
DUF3134	PF11332.3	gi|15922071|ref|NP_377740.1|	-	4.4	7.5	16.3	12	6.1	1.9	3.5	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF3134)
TIP120	PF08623.5	gi|15922071|ref|NP_377740.1|	-	5.1	6.6	14.9	0.047	13.2	1.6	2.5	1	1	1	2	2	2	0	TATA-binding	protein	interacting	(TIP20)
MerR-DNA-bind	PF09278.6	gi|15922071|ref|NP_377740.1|	-	6.4	7.2	10.7	28	5.2	0.2	3.9	1	1	3	4	4	4	0	MerR,	DNA	binding
Tweety	PF04906.8	gi|15922071|ref|NP_377740.1|	-	7.9	4.7	8.9	3.9	5.7	3.3	1.9	1	1	1	2	2	2	0	Tweety
DUF2499	PF10693.4	gi|15922072|ref|NP_377741.1|	-	0.017	15.1	14.7	0.71	9.9	1.0	3.1	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF2499)
DUF4014	PF13198.1	gi|15922072|ref|NP_377741.1|	-	0.44	10.9	9.1	0.076	13.4	1.5	2.4	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF4014)
UBA_4	PF14555.1	gi|15922072|ref|NP_377741.1|	-	3.7	7.1	6.5	23	4.5	0.1	3.3	3	0	0	3	3	3	0	UBA-like	domain
CcdA	PF07362.7	gi|15922074|ref|NP_377743.1|	-	0.06	13.2	0.6	0.069	13.0	0.4	1.2	1	0	0	1	1	1	0	Post-segregation	antitoxin	CcdA
AAA_17	PF13207.1	gi|15922076|ref|NP_377745.1|	-	6.9e-08	33.3	6.9	0.0061	17.3	0.0	4.8	3	1	0	3	3	3	2	AAA	domain
AAA_14	PF13173.1	gi|15922076|ref|NP_377745.1|	-	1.3e-05	25.0	0.4	0.12	12.2	0.0	3.6	2	2	0	2	2	2	2	AAA	domain
AAA_16	PF13191.1	gi|15922076|ref|NP_377745.1|	-	0.00027	20.9	0.0	0.41	10.6	0.0	2.5	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_22	PF13401.1	gi|15922076|ref|NP_377745.1|	-	0.0097	16.0	0.0	5.4	7.1	0.0	3.0	2	0	0	2	2	2	1	AAA	domain
AAA_10	PF12846.2	gi|15922076|ref|NP_377745.1|	-	0.011	15.2	0.5	0.54	9.6	0.0	3.2	3	0	0	3	3	3	0	AAA-like	domain
AAA_29	PF13555.1	gi|15922076|ref|NP_377745.1|	-	0.017	14.6	0.1	0.23	11.0	0.0	2.3	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
MobB	PF03205.9	gi|15922076|ref|NP_377745.1|	-	0.03	14.0	0.0	4.4	7.0	0.0	2.6	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_18	PF13238.1	gi|15922076|ref|NP_377745.1|	-	0.039	14.2	16.7	0.24	11.6	0.4	4.9	5	1	0	5	5	4	0	AAA	domain
AAA	PF00004.24	gi|15922076|ref|NP_377745.1|	-	0.046	13.9	0.0	15	5.7	0.0	2.8	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
MMR_HSR1	PF01926.18	gi|15922076|ref|NP_377745.1|	-	0.066	13.1	0.1	5.8	6.8	0.0	3.0	2	0	0	2	2	2	0	50S	ribosome-binding	GTPase
AAA_33	PF13671.1	gi|15922076|ref|NP_377745.1|	-	0.11	12.3	0.0	17	5.2	0.0	2.5	2	0	0	2	2	2	0	AAA	domain
AAA_25	PF13481.1	gi|15922076|ref|NP_377745.1|	-	0.14	11.5	0.0	9.5	5.5	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
Mpv17_PMP22	PF04117.7	gi|15922077|ref|NP_377746.1|	-	0.046	13.3	0.2	0.11	12.0	0.2	1.7	1	0	0	1	1	1	0	Mpv17	/	PMP22	family
Band_7	PF01145.20	gi|15922078|ref|NP_377747.1|	-	7.5e-20	71.5	0.5	1.4e-19	70.7	0.3	1.4	1	0	0	1	1	1	1	SPFH	domain	/	Band	7	family
Band_7_1	PF13421.1	gi|15922078|ref|NP_377747.1|	-	1.2e-12	47.8	0.1	2.9e-12	46.5	0.1	1.6	1	1	0	1	1	1	1	SPFH	domain-Band	7	family
Vps53_N	PF04100.7	gi|15922079|ref|NP_377748.1|	-	0.018	13.8	1.7	0.019	13.7	0.0	1.7	2	0	0	2	2	2	0	Vps53-like,	N-terminal
YmgB	PF10798.3	gi|15922079|ref|NP_377748.1|	-	3.9	7.3	6.9	0.67	9.8	1.0	2.3	2	1	1	3	3	3	0	Biofilm	development	protein	YmgB/AriR
DDE_Tnp_1	PF01609.16	gi|15922080|ref|NP_377749.1|	-	1e-08	35.0	0.0	2.1e-08	33.9	0.0	1.5	1	1	0	1	1	1	1	Transposase	DDE	domain
TraL	PF07178.6	gi|15922081|ref|NP_377750.1|	-	9.5	6.3	12.1	12	5.9	0.9	2.6	1	1	1	2	2	2	0	TraL	protein
ABC2_membrane	PF01061.19	gi|15922082|ref|NP_377751.1|	-	6.4e-38	130.0	22.4	6.4e-38	130.0	15.5	2.1	1	1	1	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.2	gi|15922082|ref|NP_377751.1|	-	2.2e-17	63.1	26.3	2.2e-17	63.1	18.2	1.7	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.2	gi|15922082|ref|NP_377751.1|	-	1.1e-11	44.0	21.5	1.4e-11	43.7	14.9	1.1	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|15922082|ref|NP_377751.1|	-	8.7e-10	38.1	33.3	2e-09	36.9	23.0	1.6	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_5	PF13346.1	gi|15922082|ref|NP_377751.1|	-	0.0013	18.0	18.9	0.0013	18.0	13.1	2.4	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
ABC_tran	PF00005.22	gi|15922083|ref|NP_377752.1|	-	3.5e-33	114.8	0.0	6.4e-33	113.9	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|15922083|ref|NP_377752.1|	-	2.9e-14	53.7	0.0	5.1e-11	43.0	0.0	2.3	1	1	0	1	1	1	1	AAA	domain
DUF4162	PF13732.1	gi|15922083|ref|NP_377752.1|	-	7.3e-14	52.0	0.2	1.5e-13	51.0	0.2	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4162)
AAA_23	PF13476.1	gi|15922083|ref|NP_377752.1|	-	0.00012	22.4	2.4	0.00021	21.6	1.6	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|15922083|ref|NP_377752.1|	-	0.00013	21.4	0.1	0.00024	20.5	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.1	gi|15922083|ref|NP_377752.1|	-	0.00015	20.9	0.1	0.0096	15.0	0.0	2.3	2	0	0	2	2	2	1	AAA	ATPase	domain
SMC_N	PF02463.14	gi|15922083|ref|NP_377752.1|	-	0.00028	20.1	0.1	0.0023	17.1	0.0	2.3	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
MMR_HSR1	PF01926.18	gi|15922083|ref|NP_377752.1|	-	0.022	14.7	0.6	0.17	11.8	0.4	2.2	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA	PF00004.24	gi|15922083|ref|NP_377752.1|	-	0.026	14.7	0.4	0.41	10.8	0.2	2.4	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF258	PF03193.11	gi|15922083|ref|NP_377752.1|	-	0.057	12.5	0.0	0.1	11.8	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
Thymidylate_kin	PF02223.12	gi|15922083|ref|NP_377752.1|	-	0.059	12.7	0.0	3.7	6.8	0.0	2.4	2	0	0	2	2	2	0	Thymidylate	kinase
SbcCD_C	PF13558.1	gi|15922083|ref|NP_377752.1|	-	0.066	13.1	0.0	0.18	11.7	0.0	1.8	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_33	PF13671.1	gi|15922083|ref|NP_377752.1|	-	0.07	13.0	0.0	0.17	11.7	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
SRP54	PF00448.17	gi|15922083|ref|NP_377752.1|	-	0.07	12.5	0.1	0.24	10.8	0.1	1.9	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
AAA_10	PF12846.2	gi|15922083|ref|NP_377752.1|	-	0.16	11.3	0.9	0.47	9.8	0.5	2.0	1	1	1	2	2	2	0	AAA-like	domain
PadR	PF03551.9	gi|15922084|ref|NP_377753.1|	-	2.1e-10	40.2	0.0	4.2e-10	39.2	0.0	1.6	1	1	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_45	PF14947.1	gi|15922084|ref|NP_377753.1|	-	0.0026	17.5	0.8	0.0042	16.8	0.0	1.7	2	0	0	2	2	2	1	Winged	helix-turn-helix
HemN_C	PF06969.11	gi|15922084|ref|NP_377753.1|	-	0.0087	16.0	0.0	0.022	14.7	0.0	1.7	1	0	0	1	1	1	1	HemN	C-terminal	domain
HTH_12	PF08461.5	gi|15922084|ref|NP_377753.1|	-	0.064	12.9	0.0	0.12	12.1	0.0	1.5	1	0	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
CBS	PF00571.23	gi|15922085|ref|NP_377754.1|	-	8e-27	92.7	0.7	5.2e-13	48.5	0.2	2.1	2	0	0	2	2	2	2	CBS	domain
DUF3234	PF11572.3	gi|15922085|ref|NP_377754.1|	-	0.041	14.0	0.0	5.8	7.0	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3234)
GDI	PF00996.13	gi|15922085|ref|NP_377754.1|	-	0.056	11.7	0.5	0.91	7.7	0.0	2.0	2	0	0	2	2	2	0	GDP	dissociation	inhibitor
Fer4_10	PF13237.1	gi|15922086|ref|NP_377755.1|	-	4.2e-08	32.8	10.1	5.7e-08	32.4	7.0	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|15922086|ref|NP_377755.1|	-	1.1e-07	32.1	22.7	1.8e-06	28.2	7.9	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|15922086|ref|NP_377755.1|	-	3e-07	30.0	13.6	0.00016	21.4	2.0	2.3	2	1	0	2	2	2	2	4Fe-4S	binding	domain
ETF_QO	PF05187.8	gi|15922086|ref|NP_377755.1|	-	3.3e-07	30.2	0.7	4.4e-07	29.8	0.5	1.1	1	0	0	1	1	1	1	Electron	transfer	flavoprotein-ubiquinone	oxidoreductase
Fer4_8	PF13183.1	gi|15922086|ref|NP_377755.1|	-	1.9e-06	27.7	5.2	0.00056	19.8	0.2	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|15922086|ref|NP_377755.1|	-	4.7e-06	26.2	12.1	0.00069	19.3	1.6	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|15922086|ref|NP_377755.1|	-	4.8e-06	26.7	11.8	7.6e-06	26.0	7.9	1.5	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|15922086|ref|NP_377755.1|	-	2.3e-05	23.7	4.4	2.3e-05	23.7	3.0	3.0	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|15922086|ref|NP_377755.1|	-	3.4e-05	24.1	7.0	0.0034	17.7	0.4	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|15922086|ref|NP_377755.1|	-	6.4e-05	22.9	12.7	0.00037	20.5	1.8	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_11	PF13247.1	gi|15922086|ref|NP_377755.1|	-	0.00022	21.0	6.3	0.00029	20.6	4.3	1.1	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|15922086|ref|NP_377755.1|	-	0.00052	20.3	15.1	0.019	15.4	2.6	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|15922086|ref|NP_377755.1|	-	0.012	16.3	14.5	27	5.6	10.3	2.7	1	1	1	2	2	2	0	4Fe-4S	double	cluster	binding	domain
Vps39_2	PF10367.4	gi|15922086|ref|NP_377755.1|	-	0.014	15.6	0.6	0.022	14.9	0.4	1.4	1	0	0	1	1	1	0	Vacuolar	sorting	protein	39	domain	2
Fer4_21	PF14697.1	gi|15922086|ref|NP_377755.1|	-	0.015	15.0	13.1	0.066	13.0	9.2	1.9	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
ICEA	PF05315.6	gi|15922086|ref|NP_377755.1|	-	0.017	14.4	2.1	0.021	14.1	1.4	1.1	1	0	0	1	1	1	0	ICEA	Protein
Fer4_18	PF13746.1	gi|15922086|ref|NP_377755.1|	-	0.02	15.2	12.9	0.28	11.6	2.3	2.2	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Ribosomal_S27	PF01599.14	gi|15922086|ref|NP_377755.1|	-	0.068	12.9	3.2	2.5	7.9	0.1	2.4	2	0	0	2	2	2	0	Ribosomal	protein	S27a
Fer4_20	PF14691.1	gi|15922086|ref|NP_377755.1|	-	0.17	11.5	11.1	1.1	8.9	2.3	2.1	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
DUF678	PF05077.7	gi|15922086|ref|NP_377755.1|	-	0.24	11.3	2.7	0.31	11.0	1.9	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF678)
A2L_zn_ribbon	PF08792.5	gi|15922086|ref|NP_377755.1|	-	1.5	8.3	11.6	0.41	10.1	1.6	2.7	2	1	0	2	2	2	0	A2L	zinc	ribbon	domain
XPA_N	PF01286.13	gi|15922086|ref|NP_377755.1|	-	7.8	6.2	7.3	7.8	6.2	0.8	2.3	2	0	0	2	2	2	0	XPA	protein	N-terminal
DAO	PF01266.19	gi|15922087|ref|NP_377756.1|	-	4.4e-18	65.3	0.0	2.2e-08	33.3	0.0	2.1	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|15922087|ref|NP_377756.1|	-	7e-09	35.5	0.1	1.5e-08	34.5	0.0	1.5	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.9	gi|15922087|ref|NP_377756.1|	-	1.3e-08	33.7	0.6	1.8e-06	26.7	0.1	2.1	2	0	0	2	2	2	2	HI0933-like	protein
Pyr_redox_2	PF07992.9	gi|15922087|ref|NP_377756.1|	-	1.4e-07	31.6	0.4	2.2e-07	30.9	0.0	1.6	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.12	gi|15922087|ref|NP_377756.1|	-	4.3e-07	29.2	0.0	7.9e-07	28.3	0.0	1.5	1	0	0	1	1	1	1	Thi4	family
Pyr_redox	PF00070.22	gi|15922087|ref|NP_377756.1|	-	2.8e-06	27.6	0.2	0.0017	18.7	0.0	2.6	1	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|15922087|ref|NP_377756.1|	-	3.6e-06	26.1	1.0	2.6e-05	23.2	0.7	2.0	1	1	0	1	1	1	1	Glucose	inhibited	division	protein	A
Pyr_redox_3	PF13738.1	gi|15922087|ref|NP_377756.1|	-	1.6e-05	25.1	0.0	5.1e-05	23.4	0.0	1.8	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.19	gi|15922087|ref|NP_377756.1|	-	1.6e-05	23.9	0.2	2.5e-05	23.3	0.1	1.3	1	0	0	1	1	1	1	FAD	binding	domain
FAD_oxidored	PF12831.2	gi|15922087|ref|NP_377756.1|	-	2.2e-05	23.7	0.0	3.2e-05	23.1	0.0	1.3	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
FAD_binding_3	PF01494.14	gi|15922087|ref|NP_377756.1|	-	6.5e-05	22.1	0.1	0.00026	20.1	0.1	2.0	1	1	0	1	1	1	1	FAD	binding	domain
Lycopene_cycl	PF05834.7	gi|15922087|ref|NP_377756.1|	-	9.6e-05	21.4	0.0	0.00017	20.6	0.0	1.4	1	1	0	1	1	1	1	Lycopene	cyclase	protein
3HCDH_N	PF02737.13	gi|15922087|ref|NP_377756.1|	-	0.0066	16.1	0.0	0.01	15.5	0.0	1.3	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
ApbA	PF02558.11	gi|15922087|ref|NP_377756.1|	-	0.017	14.5	0.0	0.028	13.8	0.0	1.4	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
NAD_Gly3P_dh_N	PF01210.18	gi|15922087|ref|NP_377756.1|	-	0.079	12.6	0.0	0.14	11.9	0.0	1.4	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
NAD_binding_9	PF13454.1	gi|15922087|ref|NP_377756.1|	-	0.084	12.6	0.0	0.35	10.6	0.0	2.0	1	1	0	1	1	1	0	FAD-NAD(P)-binding
Shikimate_DH	PF01488.15	gi|15922087|ref|NP_377756.1|	-	0.11	12.6	0.0	0.19	11.7	0.0	1.4	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
ETF	PF01012.16	gi|15922088|ref|NP_377757.1|	-	7.1e-77	256.7	0.0	5.1e-39	133.6	0.0	2.2	2	0	0	2	2	2	2	Electron	transfer	flavoprotein	domain
ETF_alpha	PF00766.14	gi|15922088|ref|NP_377757.1|	-	1.8e-33	113.9	0.4	3.5e-33	113.0	0.3	1.5	1	0	0	1	1	1	1	Electron	transfer	flavoprotein	FAD-binding	domain
OrfB_Zn_ribbon	PF07282.6	gi|15922089|ref|NP_377758.1|	-	1.2e-21	76.0	0.4	1.5e-21	75.8	0.3	1.1	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
zf-ribbon_3	PF13248.1	gi|15922089|ref|NP_377758.1|	-	0.014	14.5	0.2	0.051	12.8	0.0	1.8	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-C4_Topoisom	PF01396.14	gi|15922089|ref|NP_377758.1|	-	0.018	14.5	0.2	0.031	13.7	0.1	1.4	1	0	0	1	1	1	0	Topoisomerase	DNA	binding	C4	zinc	finger
zinc_ribbon_2	PF13240.1	gi|15922089|ref|NP_377758.1|	-	0.031	13.7	0.2	0.19	11.2	0.0	2.0	2	0	0	2	2	2	0	zinc-ribbon	domain
Tsg	PF04668.7	gi|15922089|ref|NP_377758.1|	-	0.043	14.0	0.8	0.05	13.8	0.5	1.1	1	0	0	1	1	1	0	Twisted	gastrulation	(Tsg)	protein	conserved	region
OrfB_IS605	PF01385.14	gi|15922090|ref|NP_377759.1|	-	5.9e-06	25.8	0.4	7.9e-06	25.4	0.3	1.3	1	0	0	1	1	1	1	Probable	transposase
LytTR	PF04397.10	gi|15922090|ref|NP_377759.1|	-	0.015	15.3	0.5	0.054	13.5	0.1	2.0	2	0	0	2	2	2	0	LytTr	DNA-binding	domain
Transposase_20	PF02371.11	gi|15922091|ref|NP_377760.1|	-	6e-25	87.1	0.0	9.5e-25	86.5	0.0	1.3	1	0	0	1	1	1	1	Transposase	IS116/IS110/IS902	family
DEDD_Tnp_IS110	PF01548.12	gi|15922091|ref|NP_377760.1|	-	2.2e-10	40.3	0.0	5.2e-10	39.1	0.0	1.7	1	0	0	1	1	1	1	Transposase
DUF445	PF04286.7	gi|15922091|ref|NP_377760.1|	-	0.0092	15.5	0.3	0.013	15.0	0.2	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF445)
PRiA4_ORF3	PF07929.6	gi|15922092|ref|NP_377761.1|	-	1.3e-09	37.7	0.0	1.6e-09	37.4	0.0	1.1	1	0	0	1	1	1	1	Plasmid	pRiA4b	ORF-3-like	protein
zf-B_box	PF00643.19	gi|15922092|ref|NP_377761.1|	-	0.29	11.0	9.6	0.69	9.8	1.8	2.4	2	0	0	2	2	2	0	B-box	zinc	finger
zf-UBR	PF02207.15	gi|15922092|ref|NP_377761.1|	-	0.87	9.3	12.9	0.45	10.2	2.1	2.5	2	1	1	3	3	3	0	Putative	zinc	finger	in	N-recognin	(UBR	box)
Ald_Xan_dh_C2	PF02738.13	gi|15922093|ref|NP_377762.1|	-	1.7e-137	459.0	0.0	2.1e-137	458.7	0.0	1.0	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|15922093|ref|NP_377762.1|	-	8.7e-28	96.6	0.1	3.5e-27	94.6	0.0	2.1	2	0	0	2	2	2	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
ECR1_N	PF14382.1	gi|15922093|ref|NP_377762.1|	-	0.07	12.4	0.5	0.16	11.3	0.0	1.9	2	0	0	2	2	2	0	Exosome	complex	exonuclease	RRP4	N-terminal	region
Fer2_2	PF01799.15	gi|15922094|ref|NP_377763.1|	-	4.7e-35	119.3	2.1	5.2e-35	119.1	0.0	1.8	2	0	0	2	2	2	1	[2Fe-2S]	binding	domain
Fer2	PF00111.22	gi|15922094|ref|NP_377763.1|	-	0.0011	18.6	0.6	0.0011	18.6	0.4	1.9	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer2_3	PF13085.1	gi|15922094|ref|NP_377763.1|	-	0.0012	18.6	1.8	0.0012	18.6	1.3	1.4	1	1	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
FAD_binding_5	PF00941.16	gi|15922095|ref|NP_377764.1|	-	2.2e-47	160.6	0.0	4.1e-47	159.7	0.0	1.4	2	0	0	2	2	2	1	FAD	binding	domain	in	molybdopterin	dehydrogenase
CO_deh_flav_C	PF03450.12	gi|15922095|ref|NP_377764.1|	-	1.5e-20	73.0	0.0	2.3e-20	72.4	0.0	1.3	1	0	0	1	1	1	1	CO	dehydrogenase	flavoprotein	C-terminal	domain
Rhodanese	PF00581.15	gi|15922096|ref|NP_377765.1|	-	1.4e-38	131.7	0.1	9.3e-20	71.0	0.0	2.1	2	0	0	2	2	2	2	Rhodanese-like	domain
DUF442	PF04273.8	gi|15922096|ref|NP_377765.1|	-	0.095	12.5	0.0	0.17	11.7	0.0	1.3	1	0	0	1	1	1	0	Putative	phosphatase	(DUF442)
AhpC-TSA	PF00578.16	gi|15922097|ref|NP_377766.1|	-	1.6e-41	140.8	0.2	1.8e-41	140.6	0.1	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|15922097|ref|NP_377766.1|	-	2e-29	102.0	0.1	2.4e-29	101.7	0.1	1.0	1	0	0	1	1	1	1	Redoxin
SCO1-SenC	PF02630.9	gi|15922097|ref|NP_377766.1|	-	1.9e-06	27.5	0.2	4.5e-06	26.3	0.1	1.6	1	1	0	1	1	1	1	SCO1/SenC
Thioredoxin_8	PF13905.1	gi|15922097|ref|NP_377766.1|	-	0.00052	20.0	0.6	0.00091	19.2	0.4	1.4	1	1	0	1	1	1	1	Thioredoxin-like
AhpC-TSA_2	PF13911.1	gi|15922097|ref|NP_377766.1|	-	0.063	13.2	0.0	0.55	10.1	0.0	2.0	1	1	0	1	1	1	0	AhpC/TSA	antioxidant	enzyme
HpcH_HpaI	PF03328.9	gi|15922098|ref|NP_377767.1|	-	1.1e-33	115.9	0.0	3.8e-32	110.9	0.0	2.1	1	1	0	1	1	1	1	HpcH/HpaI	aldolase/citrate	lyase	family
C-C_Bond_Lyase	PF15617.1	gi|15922098|ref|NP_377767.1|	-	2.7e-14	52.7	0.2	4.1e-08	32.4	0.0	2.1	2	0	0	2	2	2	2	C-C_Bond_Lyase	of	the	TIM-Barrel	fold
TPP_enzyme_C	PF02775.16	gi|15922099|ref|NP_377768.1|	-	1.5e-24	86.2	0.6	2e-24	85.9	0.4	1.1	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
E1_dh	PF00676.15	gi|15922099|ref|NP_377768.1|	-	0.0013	17.5	0.8	0.0018	17.0	0.5	1.2	1	0	0	1	1	1	1	Dehydrogenase	E1	component
DXP_synthase_N	PF13292.1	gi|15922099|ref|NP_377768.1|	-	0.0017	17.3	0.4	0.0039	16.1	0.2	1.5	1	1	0	1	1	1	1	1-deoxy-D-xylulose-5-phosphate	synthase
POR_N	PF01855.14	gi|15922100|ref|NP_377769.1|	-	9.5e-71	237.9	0.3	1.2e-70	237.6	0.2	1.1	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Transketolase_C	PF02780.15	gi|15922100|ref|NP_377769.1|	-	1.1e-05	25.3	0.0	2.6e-05	24.1	0.0	1.6	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
TPP_enzyme_N	PF02776.13	gi|15922100|ref|NP_377769.1|	-	0.00017	21.1	0.1	0.00027	20.4	0.1	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
POR	PF01558.13	gi|15922101|ref|NP_377770.1|	-	7.4e-12	45.5	0.0	8.2e-12	45.3	0.0	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
Fer4_11	PF13247.1	gi|15922102|ref|NP_377771.1|	-	1e-25	89.4	12.4	2.4e-25	88.2	6.2	2.1	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|15922102|ref|NP_377771.1|	-	2e-13	50.4	22.5	5.4e-07	29.9	3.6	2.7	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
DmsC	PF04976.7	gi|15922102|ref|NP_377771.1|	-	1.6e-12	47.2	9.5	1.6e-12	47.2	6.6	2.0	1	1	1	2	2	2	1	DMSO	reductase	anchor	subunit	(DmsC)
Fer4	PF00037.22	gi|15922102|ref|NP_377771.1|	-	5e-12	44.8	36.6	4.7e-05	22.8	3.0	5.2	6	0	0	6	6	6	4	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|15922102|ref|NP_377771.1|	-	1.7e-10	40.2	36.9	0.00027	20.6	2.6	4.8	4	1	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|15922102|ref|NP_377771.1|	-	3.8e-10	39.8	28.7	2e-07	31.1	4.9	3.4	1	1	3	4	4	4	4	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|15922102|ref|NP_377771.1|	-	1.8e-08	33.8	35.2	2.5e-05	23.9	1.2	4.6	4	1	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|15922102|ref|NP_377771.1|	-	4.6e-08	32.7	33.3	0.00022	20.9	7.3	3.5	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|15922102|ref|NP_377771.1|	-	9.5e-08	32.0	40.1	0.0036	17.7	0.8	4.2	4	0	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|15922102|ref|NP_377771.1|	-	2.4e-07	30.5	31.5	0.0019	18.4	2.0	4.4	4	0	0	4	4	4	4	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|15922102|ref|NP_377771.1|	-	0.00011	22.9	32.2	0.069	13.9	0.0	4.7	3	1	2	5	5	5	4	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.1	gi|15922102|ref|NP_377771.1|	-	0.00017	21.3	28.8	0.0039	17.0	7.9	3.2	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|15922102|ref|NP_377771.1|	-	0.0035	17.6	29.0	0.92	9.9	1.3	4.3	2	1	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|15922102|ref|NP_377771.1|	-	0.012	16.0	1.4	0.012	16.0	1.0	4.6	5	1	0	5	5	4	0	4Fe-4S	single	cluster	domain
Fer4_15	PF13459.1	gi|15922102|ref|NP_377771.1|	-	0.013	16.0	21.6	0.48	11.0	3.5	3.9	2	2	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_8	PF13183.1	gi|15922102|ref|NP_377771.1|	-	0.015	15.3	29.9	1.1	9.2	9.4	3.8	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|15922102|ref|NP_377771.1|	-	5.1	7.5	27.0	1.2	9.5	2.3	4.2	3	1	1	4	4	4	0	4Fe-4S	dicluster	domain
4HBT	PF03061.17	gi|15922103|ref|NP_377772.1|	-	1.1e-11	44.7	0.1	1.4e-11	44.3	0.0	1.2	1	0	0	1	1	1	1	Thioesterase	superfamily
4HBT_3	PF13622.1	gi|15922103|ref|NP_377772.1|	-	0.039	13.7	0.0	0.048	13.4	0.0	1.1	1	0	0	1	1	1	0	Thioesterase-like	superfamily
Acyl-CoA_dh_1	PF00441.19	gi|15922104|ref|NP_377773.1|	-	1.6e-35	122.4	0.9	2.9e-35	121.5	0.6	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.11	gi|15922104|ref|NP_377773.1|	-	2.5e-27	95.6	0.0	5.9e-27	94.4	0.0	1.7	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|15922104|ref|NP_377773.1|	-	7.7e-19	66.9	0.0	1.6e-18	65.9	0.0	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.6	gi|15922104|ref|NP_377773.1|	-	9.8e-15	54.9	0.1	1.6e-14	54.2	0.1	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
DUF1324	PF07038.6	gi|15922105|ref|NP_377774.1|	-	0.021	14.8	0.3	0.04	13.9	0.2	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1324)
ETF	PF01012.16	gi|15922106|ref|NP_377775.1|	-	6e-30	104.1	0.0	8.3e-30	103.6	0.0	1.1	1	0	0	1	1	1	1	Electron	transfer	flavoprotein	domain
Ribosomal_L32e	PF01655.13	gi|15922106|ref|NP_377775.1|	-	0.027	14.5	0.4	0.79	9.7	0.0	2.2	2	0	0	2	2	2	0	Ribosomal	protein	L32
ETF_alpha	PF00766.14	gi|15922107|ref|NP_377776.1|	-	1.1e-34	117.9	0.6	1.5e-32	111.0	0.2	3.1	3	0	0	3	3	3	1	Electron	transfer	flavoprotein	FAD-binding	domain
ETF	PF01012.16	gi|15922107|ref|NP_377776.1|	-	9.2e-14	51.4	0.2	2.4e-13	50.1	0.0	1.7	2	0	0	2	2	2	1	Electron	transfer	flavoprotein	domain
DUF3236	PF11576.3	gi|15922107|ref|NP_377776.1|	-	0.018	14.4	0.1	0.055	12.8	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3236)
GTP_cyclohydroI	PF01227.17	gi|15922107|ref|NP_377776.1|	-	0.073	12.3	0.0	0.22	10.7	0.0	1.8	2	0	0	2	2	2	0	GTP	cyclohydrolase	I
DAO	PF01266.19	gi|15922108|ref|NP_377777.1|	-	7.8e-17	61.2	0.5	1.1e-07	31.0	0.0	2.4	1	1	1	2	2	2	2	FAD	dependent	oxidoreductase
FAD_oxidored	PF12831.2	gi|15922108|ref|NP_377777.1|	-	3e-13	49.6	0.0	5.2e-13	48.8	0.0	1.3	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|15922108|ref|NP_377777.1|	-	1.5e-09	37.2	0.1	2.8e-09	36.3	0.1	1.4	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox_3	PF13738.1	gi|15922108|ref|NP_377777.1|	-	9.2e-08	32.3	0.0	2.2e-07	31.1	0.0	1.7	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|15922108|ref|NP_377777.1|	-	2.9e-07	29.3	0.4	1.4e-06	27.0	0.1	2.2	2	1	0	2	2	2	1	HI0933-like	protein
FAD_binding_3	PF01494.14	gi|15922108|ref|NP_377777.1|	-	4e-07	29.4	0.2	2.3e-06	26.9	0.2	1.9	1	1	0	1	1	1	1	FAD	binding	domain
Thi4	PF01946.12	gi|15922108|ref|NP_377777.1|	-	8.8e-06	24.9	1.8	2.5e-05	23.5	0.3	2.2	3	0	0	3	3	3	1	Thi4	family
Trp_halogenase	PF04820.9	gi|15922108|ref|NP_377777.1|	-	1.3e-05	24.0	0.8	0.0039	15.8	0.0	3.0	2	1	1	3	3	3	1	Tryptophan	halogenase
NAD_binding_8	PF13450.1	gi|15922108|ref|NP_377777.1|	-	2.9e-05	23.9	2.0	0.00016	21.6	0.8	2.3	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_2	PF07992.9	gi|15922108|ref|NP_377777.1|	-	0.00019	21.3	0.1	0.00036	20.4	0.1	1.6	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.7	gi|15922108|ref|NP_377777.1|	-	0.00025	20.0	0.2	0.0024	16.8	0.1	2.0	1	1	0	1	1	1	1	Lycopene	cyclase	protein
GIDA	PF01134.17	gi|15922108|ref|NP_377777.1|	-	0.0007	18.5	1.9	0.001	18.0	0.3	1.9	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
Pyr_redox	PF00070.22	gi|15922108|ref|NP_377777.1|	-	0.0042	17.4	1.2	0.04	14.3	0.7	2.5	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Clostridium_P47	PF06597.6	gi|15922108|ref|NP_377777.1|	-	0.092	11.2	0.0	1.4	7.2	0.0	2.2	2	1	0	2	2	2	0	Clostridium	P-47	protein
Fer4_11	PF13247.1	gi|15922109|ref|NP_377778.1|	-	1.8e-06	27.7	0.9	2.2e-06	27.4	0.6	1.1	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|15922109|ref|NP_377778.1|	-	2.5e-06	27.6	7.1	3.5e-06	27.1	4.9	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|15922109|ref|NP_377778.1|	-	7.1e-06	25.7	7.0	9.6e-06	25.3	4.9	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|15922109|ref|NP_377778.1|	-	1.7e-05	25.1	5.7	0.00012	22.4	4.2	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|15922109|ref|NP_377778.1|	-	0.0005	19.8	12.5	0.0022	17.8	2.2	3.0	2	1	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|15922109|ref|NP_377778.1|	-	0.00065	19.6	1.1	0.53	10.3	0.1	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|15922109|ref|NP_377778.1|	-	0.0011	18.7	6.1	0.0018	18.0	4.2	1.3	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|15922109|ref|NP_377778.1|	-	0.0012	18.6	4.5	0.0012	18.6	3.1	2.5	2	1	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_20	PF14691.1	gi|15922109|ref|NP_377778.1|	-	0.013	15.1	6.0	0.18	11.4	1.6	2.1	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Sgf11	PF08209.6	gi|15922109|ref|NP_377778.1|	-	0.014	14.7	0.1	0.039	13.2	0.1	1.8	1	0	0	1	1	1	0	Sgf11	(transcriptional	regulation	protein)
Fer4_17	PF13534.1	gi|15922109|ref|NP_377778.1|	-	0.092	13.1	5.8	1.3	9.4	1.1	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|15922109|ref|NP_377778.1|	-	0.16	12.6	1.4	0.16	12.6	0.9	2.2	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|15922109|ref|NP_377778.1|	-	0.41	11.4	6.4	9.9	6.9	2.1	2.3	1	1	1	2	2	2	0	4Fe-4S	double	cluster	binding	domain
Fer4	PF00037.22	gi|15922109|ref|NP_377778.1|	-	0.51	10.0	15.4	3.3	7.4	0.0	4.1	4	0	0	4	4	4	0	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|15922109|ref|NP_377778.1|	-	1	9.9	13.1	0.73	10.3	1.9	2.8	2	1	0	2	2	2	0	4Fe-4S	binding	domain
AMP-binding	PF00501.23	gi|15922110|ref|NP_377779.1|	-	1.6e-75	254.1	0.0	2.1e-75	253.7	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|15922110|ref|NP_377779.1|	-	3.6e-14	53.4	0.0	7.8e-14	52.3	0.0	1.6	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
Luciferase_3H	PF10284.4	gi|15922110|ref|NP_377779.1|	-	0.17	11.8	0.1	0.4	10.6	0.0	1.6	1	0	0	1	1	1	0	Luciferase	helical	bundle	domain
DUF35_N	PF12172.3	gi|15922111|ref|NP_377780.1|	-	1.2e-08	34.5	0.1	1.8e-08	34.0	0.1	1.2	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF35	PF01796.12	gi|15922111|ref|NP_377780.1|	-	8.1e-07	29.1	0.0	1.3e-06	28.5	0.0	1.3	1	0	0	1	1	1	1	DUF35	OB-fold	domain
DZR	PF12773.2	gi|15922111|ref|NP_377780.1|	-	0.055	13.2	0.4	0.081	12.7	0.3	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
DUF2602	PF10782.4	gi|15922111|ref|NP_377780.1|	-	0.069	13.0	0.0	0.18	11.6	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2602)
zf-ribbon_3	PF13248.1	gi|15922111|ref|NP_377780.1|	-	0.12	11.6	2.2	0.21	10.8	1.5	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
zf-C2HC_2	PF13913.1	gi|15922111|ref|NP_377780.1|	-	0.12	12.1	0.2	0.17	11.5	0.2	1.3	1	0	0	1	1	1	0	zinc-finger	of	a	C2HC-type
PBP_like	PF12727.2	gi|15922111|ref|NP_377780.1|	-	0.14	11.1	0.0	0.22	10.4	0.0	1.2	1	0	0	1	1	1	0	PBP	superfamily	domain
zinc_ribbon_2	PF13240.1	gi|15922111|ref|NP_377780.1|	-	0.19	11.2	3.0	0.39	10.2	2.1	1.6	1	0	0	1	1	1	0	zinc-ribbon	domain
DUF35_N	PF12172.3	gi|15922112|ref|NP_377781.1|	-	1.2e-08	34.6	0.3	2.2e-08	33.7	0.2	1.4	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF35	PF01796.12	gi|15922112|ref|NP_377781.1|	-	1.8e-05	24.8	0.0	2.8e-05	24.2	0.0	1.3	1	0	0	1	1	1	1	DUF35	OB-fold	domain
NMD3	PF04981.8	gi|15922112|ref|NP_377781.1|	-	0.091	11.8	0.7	0.14	11.2	0.5	1.2	1	0	0	1	1	1	0	NMD3	family
Thiolase_C	PF02803.13	gi|15922113|ref|NP_377782.1|	-	0.00089	18.6	0.0	1	8.8	0.0	2.6	2	1	0	2	2	2	2	Thiolase,	C-terminal	domain
Thiolase_N	PF00108.18	gi|15922113|ref|NP_377782.1|	-	0.005	15.8	0.0	2.2	7.1	0.1	2.3	2	0	0	2	2	2	2	Thiolase,	N-terminal	domain
Peptidase_M22	PF00814.20	gi|15922113|ref|NP_377782.1|	-	0.094	12.1	0.0	0.18	11.2	0.0	1.4	1	0	0	1	1	1	0	Glycoprotease	family
Thiolase_C	PF02803.13	gi|15922114|ref|NP_377783.1|	-	0.0037	16.6	0.0	0.0077	15.6	0.0	1.5	1	0	0	1	1	1	1	Thiolase,	C-terminal	domain
PIN	PF01850.16	gi|15922115|ref|NP_377784.1|	-	1.5e-06	28.4	0.4	2e-06	28.1	0.3	1.1	1	0	0	1	1	1	1	PIN	domain
Acyl-CoA_dh_1	PF00441.19	gi|15922116|ref|NP_377785.1|	-	7.1e-39	133.2	0.1	1.2e-38	132.5	0.1	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.11	gi|15922116|ref|NP_377785.1|	-	3.5e-17	63.0	0.0	1.3e-16	61.1	0.0	1.9	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|15922116|ref|NP_377785.1|	-	8.5e-16	57.2	0.1	1.4e-15	56.5	0.0	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.6	gi|15922116|ref|NP_377785.1|	-	4.5e-09	36.6	0.0	8.6e-08	32.5	0.0	2.7	2	1	0	2	2	2	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
AMP-binding	PF00501.23	gi|15922117|ref|NP_377786.1|	-	4.9e-74	249.1	0.0	6e-74	248.8	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|15922117|ref|NP_377786.1|	-	2.4e-12	47.6	0.3	7.5e-12	46.0	0.2	2.0	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
Amidohydro_2	PF04909.9	gi|15922118|ref|NP_377787.1|	-	5.3e-49	167.2	0.0	6.1e-49	167.0	0.0	1.1	1	0	0	1	1	1	1	Amidohydrolase
Citrate_synt	PF00285.16	gi|15922119|ref|NP_377788.1|	-	2e-124	414.9	0.0	2.2e-124	414.7	0.0	1.0	1	0	0	1	1	1	1	Citrate	synthase
NB	PF04159.8	gi|15922119|ref|NP_377788.1|	-	0.068	12.9	0.1	5.2	6.8	0.0	2.5	2	0	0	2	2	2	0	NB	glycoprotein
CBS	PF00571.23	gi|15922120|ref|NP_377789.1|	-	7.1e-29	99.3	1.0	4.7e-14	51.8	0.1	2.1	2	0	0	2	2	2	2	CBS	domain
PEP_mutase	PF13714.1	gi|15922122|ref|NP_377791.1|	-	5.7e-52	176.3	1.0	6.7e-52	176.0	0.7	1.1	1	0	0	1	1	1	1	Phosphoenolpyruvate	phosphomutase
ICL	PF00463.16	gi|15922122|ref|NP_377791.1|	-	1.7e-17	62.8	0.6	2.4e-17	62.3	0.4	1.3	1	0	0	1	1	1	1	Isocitrate	lyase	family
ComA	PF02679.10	gi|15922122|ref|NP_377791.1|	-	0.0036	16.3	0.2	0.011	14.7	0.1	1.8	1	1	0	1	1	1	1	(2R)-phospho-3-sulfolactate	synthase	(ComA)
Pantoate_transf	PF02548.10	gi|15922122|ref|NP_377791.1|	-	0.0036	16.4	0.4	0.031	13.3	0.2	2.1	1	1	1	2	2	2	2	Ketopantoate	hydroxymethyltransferase
MmgE_PrpD	PF03972.9	gi|15922123|ref|NP_377792.1|	-	4.9e-102	341.4	0.0	5.9e-102	341.1	0.0	1.0	1	0	0	1	1	1	1	MmgE/PrpD	family
CPSase_L_D3	PF02787.14	gi|15922123|ref|NP_377792.1|	-	0.1	12.3	0.0	0.31	10.7	0.0	1.7	2	0	0	2	2	2	0	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
Ldh_1_N	PF00056.18	gi|15922124|ref|NP_377793.1|	-	6.6e-32	110.2	0.0	1.4e-31	109.2	0.0	1.5	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	NAD	binding	domain
Ldh_1_C	PF02866.13	gi|15922124|ref|NP_377793.1|	-	4.6e-09	36.2	0.0	6.9e-09	35.6	0.0	1.3	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	alpha/beta	C-terminal	domain
F420_oxidored	PF03807.12	gi|15922124|ref|NP_377793.1|	-	1.6e-05	25.2	0.1	9.5e-05	22.7	0.0	2.3	3	1	1	4	4	4	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_2	PF03446.10	gi|15922124|ref|NP_377793.1|	-	0.00017	21.4	0.0	0.0004	20.2	0.0	1.7	1	1	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.18	gi|15922124|ref|NP_377793.1|	-	0.0045	16.7	0.1	0.016	14.9	0.0	1.9	2	0	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
OCD_Mu_crystall	PF02423.10	gi|15922124|ref|NP_377793.1|	-	0.012	14.3	0.0	0.019	13.7	0.0	1.2	1	0	0	1	1	1	0	Ornithine	cyclodeaminase/mu-crystallin	family
3HCDH_N	PF02737.13	gi|15922124|ref|NP_377793.1|	-	0.021	14.4	0.0	0.045	13.3	0.0	1.6	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Gp_dh_N	PF00044.19	gi|15922124|ref|NP_377793.1|	-	0.029	14.3	0.0	0.047	13.6	0.0	1.4	1	0	0	1	1	1	0	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
BacA	PF02673.13	gi|15922126|ref|NP_377795.1|	-	7.7e-50	169.4	16.0	9.6e-50	169.1	11.1	1.1	1	0	0	1	1	1	1	Bacitracin	resistance	protein	BacA
Arch_ATPase	PF01637.13	gi|15922127|ref|NP_377796.1|	-	9.2e-16	58.2	4.5	9.4e-16	58.2	1.4	2.1	2	1	0	2	2	2	1	Archaeal	ATPase
AAA_14	PF13173.1	gi|15922127|ref|NP_377796.1|	-	5.9e-11	42.3	0.8	2.5e-05	24.1	0.1	2.7	2	0	0	2	2	2	2	AAA	domain
AAA_16	PF13191.1	gi|15922127|ref|NP_377796.1|	-	1.5e-06	28.3	0.0	1.4e-05	25.1	0.0	2.3	2	1	0	2	2	2	1	AAA	ATPase	domain
AAA_35	PF14516.1	gi|15922127|ref|NP_377796.1|	-	0.003	16.2	0.0	0.04	12.5	0.0	2.2	2	0	0	2	2	2	1	AAA-like	domain
AAA_22	PF13401.1	gi|15922127|ref|NP_377796.1|	-	0.0085	16.2	0.0	0.34	11.0	0.0	2.4	1	1	0	1	1	1	1	AAA	domain
PRRSV_2b	PF07069.6	gi|15922127|ref|NP_377796.1|	-	0.0088	16.3	0.0	0.019	15.2	0.0	1.5	1	0	0	1	1	1	1	Porcine	reproductive	and	respiratory	syndrome	virus	2b
DUF4319	PF14203.1	gi|15922127|ref|NP_377796.1|	-	0.099	12.2	0.7	1.3	8.6	0.1	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4319)
AAA_29	PF13555.1	gi|15922127|ref|NP_377796.1|	-	0.14	11.7	0.0	0.3	10.6	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
DUF302	PF03625.9	gi|15922128|ref|NP_377797.1|	-	1.5e-21	75.6	0.0	2.2e-21	75.2	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF302
NAC	PF01849.13	gi|15922128|ref|NP_377797.1|	-	0.026	14.0	0.5	0.054	13.0	0.4	1.6	1	0	0	1	1	1	0	NAC	domain
DUF1640	PF07798.6	gi|15922128|ref|NP_377797.1|	-	0.09	12.8	0.1	0.14	12.2	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1640)
DUF2431	PF10354.4	gi|15922128|ref|NP_377797.1|	-	0.13	12.2	0.1	0.16	11.8	0.1	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF2431)
TLE_N	PF03920.10	gi|15922128|ref|NP_377797.1|	-	0.14	11.9	0.8	0.61	9.9	0.1	1.9	2	0	0	2	2	2	0	Groucho/TLE	N-terminal	Q-rich	domain
TP_methylase	PF00590.15	gi|15922129|ref|NP_377798.1|	-	3.3e-26	92.3	0.9	4.1e-26	91.9	0.1	1.4	2	0	0	2	2	2	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
RhoGAP	PF00620.22	gi|15922129|ref|NP_377798.1|	-	0.12	11.9	0.2	0.21	11.1	0.2	1.5	1	0	0	1	1	1	0	RhoGAP	domain
DUF1542	PF07564.6	gi|15922129|ref|NP_377798.1|	-	0.63	10.0	6.9	0.07	13.1	1.5	1.9	2	0	0	2	2	2	0	Domain	of	Unknown	Function	(DUF1542)
TP_methylase	PF00590.15	gi|15922130|ref|NP_377799.1|	-	1.1e-33	116.7	0.0	1.3e-33	116.4	0.0	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
Methyltransf_18	PF12847.2	gi|15922132|ref|NP_377801.1|	-	1.4e-13	51.4	0.1	2e-13	50.9	0.1	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|15922132|ref|NP_377801.1|	-	1.9e-12	47.0	0.3	2.3e-12	46.7	0.2	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|15922132|ref|NP_377801.1|	-	6e-12	45.5	0.2	1e-11	44.8	0.1	1.3	1	1	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
MTS	PF05175.9	gi|15922132|ref|NP_377801.1|	-	3.8e-08	32.8	0.5	1.4e-07	31.0	0.3	2.0	1	1	1	2	2	2	1	Methyltransferase	small	domain
Cons_hypoth95	PF03602.10	gi|15922132|ref|NP_377801.1|	-	1.1e-07	31.3	0.1	1.8e-07	30.7	0.0	1.3	1	1	0	1	1	1	1	Conserved	hypothetical	protein	95
GidB	PF02527.10	gi|15922132|ref|NP_377801.1|	-	3.5e-07	29.5	0.3	6.8e-07	28.6	0.2	1.3	1	1	0	1	1	1	1	rRNA	small	subunit	methyltransferase	G
Methyltransf_3	PF01596.12	gi|15922132|ref|NP_377801.1|	-	6.9e-07	28.5	0.6	1.7e-06	27.2	0.3	1.5	1	1	1	2	2	2	1	O-methyltransferase
Ubie_methyltran	PF01209.13	gi|15922132|ref|NP_377801.1|	-	3.2e-06	26.4	0.5	4e-06	26.1	0.3	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
GCD14	PF08704.5	gi|15922132|ref|NP_377801.1|	-	1.3e-05	24.8	0.0	1.7e-05	24.4	0.0	1.1	1	0	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
Methyltransf_4	PF02390.12	gi|15922132|ref|NP_377801.1|	-	1.7e-05	23.9	0.2	4.1e-05	22.7	0.0	1.7	2	0	0	2	2	2	1	Putative	methyltransferase
Methyltransf_26	PF13659.1	gi|15922132|ref|NP_377801.1|	-	1.9e-05	24.6	0.0	3.4e-05	23.8	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
DOT1	PF08123.8	gi|15922132|ref|NP_377801.1|	-	2.2e-05	23.8	0.2	5.7e-05	22.5	0.0	1.6	1	1	1	2	2	2	1	Histone	methylation	protein	DOT1
CMAS	PF02353.15	gi|15922132|ref|NP_377801.1|	-	3.4e-05	23.0	0.2	4.2e-05	22.7	0.1	1.1	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
UPF0020	PF01170.13	gi|15922132|ref|NP_377801.1|	-	3.7e-05	23.3	0.1	5.8e-05	22.7	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
PrmA	PF06325.8	gi|15922132|ref|NP_377801.1|	-	4.1e-05	22.8	2.0	5.4e-05	22.4	1.4	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_24	PF13578.1	gi|15922132|ref|NP_377801.1|	-	7.2e-05	23.5	0.0	9.9e-05	23.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|15922132|ref|NP_377801.1|	-	0.00011	22.4	0.0	0.00016	21.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Met_10	PF02475.11	gi|15922132|ref|NP_377801.1|	-	0.00018	21.1	0.2	0.00027	20.6	0.1	1.3	1	1	0	1	1	1	1	Met-10+	like-protein
Methyltransf_11	PF08241.7	gi|15922132|ref|NP_377801.1|	-	0.00021	21.7	0.0	0.00035	20.9	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Fibrillarin	PF01269.12	gi|15922132|ref|NP_377801.1|	-	0.00045	19.2	0.0	0.00055	18.9	0.0	1.2	1	0	0	1	1	1	1	Fibrillarin
RrnaAD	PF00398.15	gi|15922132|ref|NP_377801.1|	-	0.0014	17.6	0.0	0.0021	17.1	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_15	PF09445.5	gi|15922132|ref|NP_377801.1|	-	0.0024	17.4	0.0	0.0036	16.8	0.0	1.2	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_16	PF10294.4	gi|15922132|ref|NP_377801.1|	-	0.0084	15.5	0.1	0.012	15.0	0.1	1.3	1	0	0	1	1	1	1	Putative	methyltransferase
Methyltransf_12	PF08242.7	gi|15922132|ref|NP_377801.1|	-	0.0092	16.4	0.0	0.015	15.7	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
tRNA_m1G_MT	PF01746.16	gi|15922132|ref|NP_377801.1|	-	0.0097	15.5	0.2	0.014	15.0	0.1	1.4	1	1	0	1	1	1	1	tRNA	(Guanine-1)-methyltransferase
Methyltransf_5	PF01795.14	gi|15922132|ref|NP_377801.1|	-	0.022	14.0	0.1	0.13	11.5	0.0	1.9	1	1	1	2	2	2	0	MraW	methylase	family
DNA_methylase	PF00145.12	gi|15922132|ref|NP_377801.1|	-	0.065	12.3	0.2	0.77	8.8	0.1	2.0	2	0	0	2	2	2	0	C-5	cytosine-specific	DNA	methylase
Methyltransf_23	PF13489.1	gi|15922132|ref|NP_377801.1|	-	0.11	12.2	0.0	0.15	11.7	0.0	1.4	1	1	0	1	1	1	0	Methyltransferase	domain
CbiD	PF01888.12	gi|15922134|ref|NP_377803.1|	-	6.4e-71	238.3	2.1	6.4e-71	238.3	1.5	2.3	2	1	0	3	3	3	1	CbiD
TP_methylase	PF00590.15	gi|15922135|ref|NP_377804.1|	-	1.2e-39	136.1	0.3	1.4e-39	136.0	0.2	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
CbiC	PF02570.10	gi|15922136|ref|NP_377805.1|	-	2.8e-48	163.9	0.5	3.7e-48	163.5	0.3	1.2	1	0	0	1	1	1	1	Precorrin-8X	methylmutase
CbiX	PF01903.12	gi|15922136|ref|NP_377805.1|	-	4.6e-22	78.1	0.0	9.8e-22	77.0	0.0	1.6	1	0	0	1	1	1	1	CbiX
CbiK	PF06180.6	gi|15922136|ref|NP_377805.1|	-	0.034	13.2	0.1	0.089	11.8	0.0	1.7	2	0	0	2	2	2	0	Cobalt	chelatase	(CbiK)
BEN	PF10523.4	gi|15922136|ref|NP_377805.1|	-	0.073	13.1	0.0	0.18	11.8	0.0	1.7	1	0	0	1	1	1	0	BEN	domain
Thioredoxin_6	PF13848.1	gi|15922136|ref|NP_377805.1|	-	0.1	12.4	0.1	0.31	10.8	0.0	1.8	2	0	0	2	2	2	0	Thioredoxin-like	domain
TP_methylase	PF00590.15	gi|15922137|ref|NP_377806.1|	-	6.3e-31	107.7	0.0	7.1e-31	107.5	0.0	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
YcxB	PF14317.1	gi|15922137|ref|NP_377806.1|	-	0.029	13.6	0.0	0.083	12.1	0.0	1.8	2	0	0	2	2	2	0	YcxB-like	protein
CbiG_N	PF11760.3	gi|161751091|ref|NP_377807.2|	-	1.4e-28	98.4	0.2	3.7e-28	97.0	0.0	1.8	2	0	0	2	2	2	1	Cobalamin	synthesis	G	N-terminal
CbiG_C	PF01890.11	gi|161751091|ref|NP_377807.2|	-	3.7e-20	72.3	0.3	7.5e-20	71.3	0.2	1.5	1	0	0	1	1	1	1	Cobalamin	synthesis	G	C-terminus
CbiG_mid	PF11761.3	gi|161751091|ref|NP_377807.2|	-	0.00041	20.5	0.0	0.0044	17.2	0.0	2.3	2	0	0	2	2	2	1	Cobalamin	biosynthesis	central	region
Asparaginase_2	PF01112.13	gi|15922139|ref|NP_377808.1|	-	1e-56	192.0	7.8	4.3e-36	124.2	2.0	2.0	1	1	1	2	2	2	2	Asparaginase
DUF4115	PF13464.1	gi|15922139|ref|NP_377808.1|	-	0.023	14.3	0.1	0.049	13.2	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4115)
MFS_1	PF07690.11	gi|15922140|ref|NP_377809.1|	-	9.6e-18	63.9	45.9	9.6e-18	63.9	31.8	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|15922140|ref|NP_377809.1|	-	6.3e-16	57.9	38.9	1.1e-13	50.6	8.7	2.2	1	1	1	2	2	2	2	Sugar	(and	other)	transporter
MFS_2	PF13347.1	gi|15922140|ref|NP_377809.1|	-	2.5e-05	22.8	25.7	7.6e-05	21.2	17.8	1.9	1	1	0	1	1	1	1	MFS/sugar	transport	protein
EMP70	PF02990.11	gi|15922141|ref|NP_377810.1|	-	0.55	8.6	14.3	0.11	10.8	7.4	1.6	1	1	1	2	2	2	0	Endomembrane	protein	70
KaiC	PF06745.8	gi|15922142|ref|NP_377811.1|	-	3.1e-87	291.4	0.0	4.1e-87	291.0	0.0	1.2	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.1	gi|15922142|ref|NP_377811.1|	-	1.2e-08	34.5	0.0	2.2e-08	33.7	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
GvpD	PF07088.6	gi|15922142|ref|NP_377811.1|	-	0.00016	20.1	0.0	0.00022	19.7	0.0	1.1	1	0	0	1	1	1	1	GvpD	gas	vesicle	protein
DUF2075	PF09848.4	gi|15922142|ref|NP_377811.1|	-	0.00025	20.1	0.0	0.00044	19.3	0.0	1.5	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_14	PF13173.1	gi|15922142|ref|NP_377811.1|	-	0.0012	18.8	0.0	0.0022	17.9	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|15922142|ref|NP_377811.1|	-	0.0079	15.9	0.2	0.04	13.6	0.0	1.9	2	0	0	2	2	2	1	Archaeal	ATPase
AAA_22	PF13401.1	gi|15922142|ref|NP_377811.1|	-	0.021	14.9	0.1	0.042	13.9	0.1	1.6	1	1	0	1	1	1	0	AAA	domain
AAA_19	PF13245.1	gi|15922142|ref|NP_377811.1|	-	0.023	14.4	0.7	0.059	13.1	0.5	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
T2SE	PF00437.15	gi|15922142|ref|NP_377811.1|	-	0.028	13.3	0.0	0.062	12.1	0.0	1.6	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
N6_N4_Mtase	PF01555.13	gi|15922142|ref|NP_377811.1|	-	0.032	13.7	0.0	0.074	12.5	0.0	1.5	1	1	1	2	2	2	0	DNA	methylase
AAA_18	PF13238.1	gi|15922142|ref|NP_377811.1|	-	0.061	13.6	2.4	0.068	13.4	0.1	2.2	2	1	0	2	2	2	0	AAA	domain
DnaB_C	PF03796.10	gi|15922142|ref|NP_377811.1|	-	0.097	11.5	0.0	0.27	10.1	0.0	1.7	1	0	0	1	1	1	0	DnaB-like	helicase	C	terminal	domain
FtsK_SpoIIIE	PF01580.13	gi|15922142|ref|NP_377811.1|	-	0.12	11.7	0.0	5.4	6.4	0.0	2.4	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
AAA_16	PF13191.1	gi|15922142|ref|NP_377811.1|	-	0.17	11.8	0.1	0.29	11.1	0.1	1.5	1	1	0	1	1	1	0	AAA	ATPase	domain
AA_permease	PF00324.16	gi|15922144|ref|NP_377813.1|	-	1.4e-20	73.1	44.8	1.4e-20	73.1	31.1	1.4	1	1	0	1	1	1	1	Amino	acid	permease
AA_permease_2	PF13520.1	gi|15922144|ref|NP_377813.1|	-	6.3e-14	51.3	48.0	1e-13	50.6	33.3	1.3	1	0	0	1	1	1	1	Amino	acid	permease
Herpes_US9	PF06072.6	gi|15922144|ref|NP_377813.1|	-	3.5	7.5	6.0	1.5	8.7	0.2	3.3	3	0	0	3	3	3	0	Alphaherpesvirus	tegument	protein	US9
DUF3816	PF12822.2	gi|15922145|ref|NP_377814.1|	-	0.053	13.4	12.1	0.074	12.9	8.4	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3816)
DUF2254	PF10011.4	gi|15922145|ref|NP_377814.1|	-	0.074	11.5	0.4	0.12	10.8	0.2	1.3	1	1	0	1	1	1	0	Predicted	membrane	protein	(DUF2254)
Oxidored_q2	PF00420.19	gi|15922145|ref|NP_377814.1|	-	0.35	10.4	5.1	0.56	9.8	3.5	1.3	1	0	0	1	1	1	0	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
DUF3671	PF12420.3	gi|15922145|ref|NP_377814.1|	-	2.2	8.3	8.4	3.8	7.5	5.8	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function
DrsE	PF02635.10	gi|15922146|ref|NP_377815.1|	-	1.3e-14	54.2	0.6	1.4e-14	54.1	0.4	1.0	1	0	0	1	1	1	1	DsrE/DsrF-like	family
DrsE_2	PF13686.1	gi|15922146|ref|NP_377815.1|	-	9.2e-05	22.2	0.6	0.00011	22.0	0.4	1.1	1	0	0	1	1	1	1	DsrE/DsrF/DrsH-like	family
DUF2299	PF10061.4	gi|15922147|ref|NP_377816.1|	-	2.8e-46	156.3	0.7	3.2e-46	156.2	0.5	1.0	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2299)
HAD_2	PF13419.1	gi|15922148|ref|NP_377817.1|	-	3.4e-13	50.1	0.0	4.5e-13	49.7	0.0	1.2	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|15922148|ref|NP_377817.1|	-	0.006	16.2	0.0	0.0098	15.5	0.0	1.4	1	0	0	1	1	1	1	HAD-hyrolase-like
Fer4_9	PF13187.1	gi|15922149|ref|NP_377818.1|	-	3.5e-09	36.7	15.5	0.00025	21.2	4.5	3.8	3	1	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|15922149|ref|NP_377818.1|	-	2.2e-08	34.3	19.7	0.00014	22.1	1.5	3.6	4	0	0	4	4	3	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|15922149|ref|NP_377818.1|	-	1.2e-06	28.1	22.2	0.00011	21.9	2.3	4.1	4	0	0	4	4	4	2	4Fe-4S	binding	domain
Fer4	PF00037.22	gi|15922149|ref|NP_377818.1|	-	1.4e-06	27.6	30.4	1.1e-05	24.8	2.6	4.9	6	0	0	6	6	6	3	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|15922149|ref|NP_377818.1|	-	2.2e-06	27.4	7.9	2.2e-06	27.4	5.5	2.6	3	0	0	3	3	2	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|15922149|ref|NP_377818.1|	-	8.1e-06	25.5	22.7	0.008	15.9	1.5	3.6	3	1	1	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|15922149|ref|NP_377818.1|	-	0.00011	21.8	2.0	0.00011	21.8	1.4	4.5	5	0	0	5	5	5	2	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|15922149|ref|NP_377818.1|	-	0.01	15.8	19.4	0.025	14.5	6.8	3.6	2	1	2	4	4	4	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|15922149|ref|NP_377818.1|	-	0.052	14.1	10.7	0.12	12.9	0.7	3.5	3	0	0	3	3	3	0	4Fe-4S	single	cluster	domain
ATE_N	PF04376.8	gi|15922149|ref|NP_377818.1|	-	0.065	13.0	1.1	3	7.7	0.1	2.8	2	0	0	2	2	2	0	Arginine-tRNA-protein	transferase,	N	terminus
Fer4_17	PF13534.1	gi|15922149|ref|NP_377818.1|	-	0.21	11.9	21.4	0.29	11.5	1.1	4.3	2	1	2	4	4	4	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|15922149|ref|NP_377818.1|	-	0.24	11.8	18.0	0.12	12.7	0.6	3.4	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_19	PF06902.6	gi|15922149|ref|NP_377818.1|	-	0.51	10.1	5.6	2	8.2	0.2	3.4	3	0	0	3	3	3	0	Divergent	4Fe-4S	mono-cluster
zinc_ribbon_2	PF13240.1	gi|15922149|ref|NP_377818.1|	-	1.3	8.6	7.9	4.8	6.7	0.0	3.3	3	0	0	3	3	3	0	zinc-ribbon	domain
Fer4_16	PF13484.1	gi|15922149|ref|NP_377818.1|	-	1.5	9.5	21.1	0.48	11.1	3.8	3.8	3	2	1	4	4	4	0	4Fe-4S	double	cluster	binding	domain
Nitrate_red_del	PF02613.10	gi|15922150|ref|NP_377819.1|	-	9.7e-10	38.4	0.0	1.9e-09	37.4	0.0	1.5	1	1	0	1	1	1	1	Nitrate	reductase	delta	subunit
Fer4_11	PF13247.1	gi|15922151|ref|NP_377820.1|	-	1.1e-23	82.9	7.0	1.1e-23	82.9	4.9	2.0	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|15922151|ref|NP_377820.1|	-	2.3e-12	46.9	21.6	5.5e-08	32.9	4.4	3.0	2	1	2	4	4	4	4	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|15922151|ref|NP_377820.1|	-	3.6e-11	43.2	18.7	5.2e-05	23.5	4.7	2.9	2	1	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|15922151|ref|NP_377820.1|	-	1.4e-07	31.1	20.5	0.00032	20.4	2.5	3.0	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|15922151|ref|NP_377820.1|	-	0.00028	20.6	26.7	0.05	13.5	0.8	4.6	5	0	0	5	5	5	3	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|15922151|ref|NP_377820.1|	-	0.00075	19.6	29.2	0.15	12.4	0.2	4.7	5	0	0	5	5	5	3	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|15922151|ref|NP_377820.1|	-	0.002	18.4	9.7	0.47	10.9	0.1	3.6	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|15922151|ref|NP_377820.1|	-	0.0044	17.0	19.5	0.0077	16.2	4.1	3.1	1	1	2	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|15922151|ref|NP_377820.1|	-	0.012	15.9	19.3	0.54	10.6	0.4	3.7	2	1	2	4	4	4	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|15922151|ref|NP_377820.1|	-	0.018	15.5	34.9	0.8	10.4	5.7	4.3	4	0	0	4	4	4	0	4Fe-4S	binding	domain
Fer4	PF00037.22	gi|15922151|ref|NP_377820.1|	-	0.037	13.6	0.8	0.037	13.6	0.5	4.4	4	0	0	4	4	4	0	4Fe-4S	binding	domain
DUF917	PF06032.7	gi|15922151|ref|NP_377820.1|	-	0.17	10.4	0.0	0.24	9.8	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF917)
Fer4_21	PF14697.1	gi|15922151|ref|NP_377820.1|	-	0.26	11.1	21.3	0.27	11.0	0.2	3.7	2	1	2	4	4	4	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|15922151|ref|NP_377820.1|	-	6.6	7.3	16.8	0.24	12.0	0.8	3.3	2	1	1	3	3	3	0	4Fe-4S	single	cluster	domain
Molybdopterin	PF00384.17	gi|15922152|ref|NP_377821.1|	-	1.9e-05	23.6	0.0	0.88	8.2	0.0	3.2	3	0	0	3	3	3	3	Molybdopterin	oxidoreductase
Molybdop_Fe4S4	PF04879.11	gi|15922152|ref|NP_377821.1|	-	0.13	12.0	0.2	0.3	10.9	0.1	1.5	1	0	0	1	1	1	0	Molybdopterin	oxidoreductase	Fe4S4	domain
TPR_11	PF13414.1	gi|15922153|ref|NP_377822.1|	-	6.9e-29	99.2	21.5	3.1e-08	33.1	0.2	5.9	2	2	5	7	7	7	7	TPR	repeat
TPR_2	PF07719.12	gi|15922153|ref|NP_377822.1|	-	1.9e-25	86.6	25.9	0.00017	21.2	0.1	9.1	8	1	1	9	9	9	5	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|15922153|ref|NP_377822.1|	-	3e-23	81.8	2.1	7.5e-05	23.2	0.1	5.7	4	2	0	5	5	5	4	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|15922153|ref|NP_377822.1|	-	2.2e-19	68.1	32.5	0.00017	21.0	0.1	9.2	9	0	0	9	9	9	6	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|15922153|ref|NP_377822.1|	-	3.5e-19	67.0	40.6	0.00014	21.3	0.2	8.7	6	2	3	9	9	9	6	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|15922153|ref|NP_377822.1|	-	6.9e-19	66.6	0.1	0.0047	17.4	0.0	7.2	6	2	1	7	7	7	3	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|15922153|ref|NP_377822.1|	-	3.5e-18	65.7	16.2	7.7e-06	26.1	0.0	5.8	2	2	5	7	7	7	6	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|15922153|ref|NP_377822.1|	-	9.6e-18	63.8	19.6	0.0001	22.1	1.7	7.2	2	1	5	7	7	7	5	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|15922153|ref|NP_377822.1|	-	1.7e-16	60.0	19.9	1.6e-05	24.9	0.2	5.4	2	2	4	6	6	6	6	Anaphase-promoting	complex,	cyclosome,	subunit	3
NARP1	PF12569.3	gi|15922153|ref|NP_377822.1|	-	1.3e-15	57.2	13.3	1.5e-06	27.3	0.6	4.8	1	1	5	6	6	6	4	NMDA	receptor-regulated	protein	1
TPR_17	PF13431.1	gi|15922153|ref|NP_377822.1|	-	6.7e-13	47.7	15.3	0.09	13.0	0.2	8.6	8	1	0	8	8	8	3	Tetratricopeptide	repeat
TPR_9	PF13371.1	gi|15922153|ref|NP_377822.1|	-	5.6e-10	38.9	0.0	0.011	15.5	0.0	4.7	3	1	1	4	4	4	3	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|15922153|ref|NP_377822.1|	-	2.1e-09	37.2	18.3	1	9.9	0.1	8.6	9	0	0	9	9	9	2	Tetratricopeptide	repeat
TPR_21	PF09976.4	gi|15922153|ref|NP_377822.1|	-	7.1e-06	26.0	2.2	1.6	8.7	0.1	4.4	3	2	2	5	5	5	2	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|15922153|ref|NP_377822.1|	-	1.2e-05	24.7	4.7	0.22	11.4	0.1	6.4	8	0	0	8	8	6	1	Tetratricopeptide	repeat
TPR_4	PF07721.9	gi|15922153|ref|NP_377822.1|	-	5.3e-05	23.2	0.0	2.8	8.6	0.0	4.2	4	0	0	4	4	4	1	Tetratricopeptide	repeat
ChAPs	PF09295.5	gi|15922153|ref|NP_377822.1|	-	0.00023	20.0	0.1	0.026	13.2	0.0	2.1	1	1	1	2	2	2	1	ChAPs	(Chs5p-Arf1p-binding	proteins)
Coatomer_E	PF04733.9	gi|15922153|ref|NP_377822.1|	-	0.00053	19.2	0.2	0.067	12.3	0.0	3.1	1	1	2	3	3	3	1	Coatomer	epsilon	subunit
TPR_20	PF14561.1	gi|15922153|ref|NP_377822.1|	-	0.0014	18.6	1.5	6.1	7.0	0.0	5.0	3	2	3	6	6	6	0	Tetratricopeptide	repeat
DUF627	PF04781.7	gi|15922153|ref|NP_377822.1|	-	0.0037	16.8	5.1	4.6	6.8	0.0	4.6	3	1	1	4	4	3	1	Protein	of	unknown	function	(DUF627)
Fis1_TPR_C	PF14853.1	gi|15922153|ref|NP_377822.1|	-	0.0051	16.6	16.0	2.7	7.9	0.0	5.9	7	1	1	8	8	8	2	Fis1	C-terminal	tetratricopeptide	repeat
TPR_10	PF13374.1	gi|15922153|ref|NP_377822.1|	-	0.0056	16.5	6.6	1.3	9.0	0.0	5.9	7	0	0	7	7	7	1	Tetratricopeptide	repeat
Alkyl_sulf_dimr	PF14863.1	gi|15922153|ref|NP_377822.1|	-	0.0057	16.8	0.1	0.039	14.2	0.0	2.3	2	1	0	2	2	2	1	Alkyl	sulfatase	dimerisation
ATP13	PF12921.2	gi|15922153|ref|NP_377822.1|	-	0.011	15.1	1.8	0.15	11.4	0.2	2.4	1	1	1	2	2	2	0	Mitochondrial	ATPase	expression
MIT	PF04212.13	gi|15922153|ref|NP_377822.1|	-	0.055	13.3	17.5	1.6	8.6	0.4	6.9	6	1	1	7	7	7	0	MIT	(microtubule	interacting	and	transport)	domain
DUF357	PF04010.8	gi|15922153|ref|NP_377822.1|	-	5.9	6.6	10.3	8.4	6.1	0.3	4.3	4	1	1	5	5	4	0	Protein	of	unknown	function	(DUF357)
NrfD	PF03916.9	gi|15922154|ref|NP_377823.1|	-	1.5e-10	41.0	21.9	1.5e-10	41.0	15.2	2.0	2	0	0	2	2	2	2	Polysulphide	reductase,	NrfD
HTH_24	PF13412.1	gi|15922155|ref|NP_377824.1|	-	2.7e-05	23.4	0.3	9e-05	21.7	0.0	2.1	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.17	gi|15922155|ref|NP_377824.1|	-	2.9e-05	23.7	0.1	7.6e-05	22.3	0.0	1.8	2	0	0	2	2	2	1	MarR	family
TrmB	PF01978.14	gi|15922155|ref|NP_377824.1|	-	4.9e-05	22.9	0.0	0.00013	21.5	0.0	1.7	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_5	PF01022.15	gi|15922155|ref|NP_377824.1|	-	0.00025	20.6	1.0	0.00059	19.4	0.0	2.1	3	0	0	3	3	3	1	Bacterial	regulatory	protein,	arsR	family
HTH_45	PF14947.1	gi|15922155|ref|NP_377824.1|	-	0.00063	19.5	0.1	0.0014	18.4	0.0	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_27	PF13463.1	gi|15922155|ref|NP_377824.1|	-	0.00066	19.9	0.0	0.0013	18.9	0.0	1.6	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
Topoisom_bac	PF01131.15	gi|15922155|ref|NP_377824.1|	-	0.001	17.9	0.1	0.0021	16.9	0.0	1.5	2	0	0	2	2	2	1	DNA	topoisomerase
HTH_IclR	PF09339.5	gi|15922155|ref|NP_377824.1|	-	0.0015	18.1	0.0	0.0028	17.1	0.0	1.5	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|15922155|ref|NP_377824.1|	-	0.0055	16.6	0.0	0.017	15.0	0.0	1.8	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
MarR_2	PF12802.2	gi|15922155|ref|NP_377824.1|	-	0.0062	16.1	0.0	0.012	15.2	0.0	1.4	1	0	0	1	1	1	1	MarR	family
GatB_Yqey	PF02637.13	gi|15922155|ref|NP_377824.1|	-	0.0063	16.2	0.1	0.059	13.0	0.0	2.2	1	1	1	2	2	2	1	GatB	domain
HTH_11	PF08279.7	gi|15922155|ref|NP_377824.1|	-	0.016	14.8	0.0	0.05	13.2	0.0	1.9	1	0	0	1	1	1	0	HTH	domain
HTH_Crp_2	PF13545.1	gi|15922155|ref|NP_377824.1|	-	0.065	13.0	0.1	0.23	11.2	0.0	2.1	2	0	0	2	2	2	0	Crp-like	helix-turn-helix	domain
DUF2173	PF09941.4	gi|15922156|ref|NP_377825.1|	-	1.7e-42	143.7	0.5	1.9e-42	143.5	0.4	1.0	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2173)
Palm_thioest	PF02089.10	gi|15922157|ref|NP_377826.1|	-	0.11	11.3	0.0	0.13	11.1	0.0	1.0	1	0	0	1	1	1	0	Palmitoyl	protein	thioesterase
DUF2777	PF10949.3	gi|15922157|ref|NP_377826.1|	-	0.49	10.0	2.0	3.6	7.2	0.1	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2777)
SGL	PF08450.7	gi|15922158|ref|NP_377827.1|	-	1.3e-76	257.2	0.0	1.4e-76	257.1	0.0	1.0	1	0	0	1	1	1	1	SMP-30/Gluconolaconase/LRE-like	region
Arylesterase	PF01731.15	gi|15922158|ref|NP_377827.1|	-	0.0038	17.1	0.1	0.17	11.8	0.0	2.8	3	0	0	3	3	3	1	Arylesterase
Reg_prop	PF07494.6	gi|15922158|ref|NP_377827.1|	-	0.0093	15.8	0.1	18	5.7	0.0	3.8	3	0	0	3	3	3	2	Two	component	regulator	propeller
Str_synth	PF03088.11	gi|15922158|ref|NP_377827.1|	-	0.11	12.4	0.0	0.29	11.1	0.0	1.7	1	0	0	1	1	1	0	Strictosidine	synthase
Lysine_decarbox	PF03641.9	gi|15922159|ref|NP_377828.1|	-	5.2e-06	26.3	0.0	9e-06	25.5	0.0	1.4	1	0	0	1	1	1	1	Possible	lysine	decarboxylase
Nuc_deoxyrib_tr	PF05014.10	gi|15922159|ref|NP_377828.1|	-	0.01	15.7	0.0	0.024	14.5	0.0	1.5	1	1	0	1	1	1	0	Nucleoside	2-deoxyribosyltransferase
GATase_6	PF13522.1	gi|15922160|ref|NP_377829.1|	-	6.9e-09	35.7	0.0	1.1e-08	35.1	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_4	PF13230.1	gi|15922160|ref|NP_377829.1|	-	9.4e-07	27.7	0.0	1.1e-06	27.5	0.0	1.1	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
DSS1_SEM1	PF05160.8	gi|15922161|ref|NP_377830.1|	-	0.083	12.6	0.8	0.092	12.5	0.6	1.2	1	0	0	1	1	1	0	DSS1/SEM1	family
Plasmid_stabil	PF05016.9	gi|15922162|ref|NP_377831.1|	-	0.00032	21.0	0.0	0.00038	20.8	0.0	1.2	1	0	0	1	1	1	1	Plasmid	stabilisation	system	protein
Pox_L3_FP4	PF03339.9	gi|15922162|ref|NP_377831.1|	-	0.039	12.4	1.1	1.4	7.2	0.0	2.0	1	1	1	2	2	2	0	Poxvirus	L3/FP4	protein
DUF1286	PF06939.6	gi|15922163|ref|NP_377832.1|	-	8.7e-46	154.7	7.2	8.7e-46	154.7	5.0	1.5	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1286)
DUF457	PF04307.9	gi|15922163|ref|NP_377832.1|	-	0.014	14.7	15.1	0.15	11.4	10.5	2.0	1	1	0	1	1	1	0	Predicted	membrane-bound	metal-dependent	hydrolase	(DUF457)
DUF3834	PF12916.2	gi|15922164|ref|NP_377833.1|	-	1.8e-82	275.2	2.5	2e-82	275.0	1.7	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3834)
SBP_bac_3	PF00497.15	gi|15922164|ref|NP_377833.1|	-	0.026	13.7	0.3	0.04	13.1	0.2	1.5	1	1	0	1	1	1	0	Bacterial	extracellular	solute-binding	proteins,	family	3
Clp_N	PF02861.15	gi|15922164|ref|NP_377833.1|	-	0.1	12.5	0.0	0.3	11.0	0.0	1.8	2	0	0	2	2	2	0	Clp	amino	terminal	domain
MFS_1	PF07690.11	gi|15922165|ref|NP_377834.1|	-	2.1e-38	131.9	61.6	2.8e-26	92.0	19.9	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_1	PF07690.11	gi|15922166|ref|NP_377835.1|	-	4.2e-31	107.9	46.9	4.4e-19	68.3	12.0	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_1_like	PF12832.2	gi|15922166|ref|NP_377835.1|	-	0.018	14.8	0.3	0.018	14.8	0.2	3.7	4	0	0	4	4	4	0	MFS_1	like	family
DoxD	PF04173.8	gi|15922168|ref|NP_377837.1|	-	1.6e-68	229.6	1.6	1.8e-68	229.4	1.1	1.0	1	0	0	1	1	1	1	TQO	small	subunit	DoxD
DoxX	PF07681.7	gi|15922168|ref|NP_377837.1|	-	1.7e-07	31.5	8.8	1.7e-07	31.5	6.1	1.9	2	1	0	2	2	2	1	DoxX
DoxA	PF07680.6	gi|15922169|ref|NP_377838.1|	-	4.1e-44	149.4	0.3	4.9e-44	149.1	0.2	1.1	1	0	0	1	1	1	1	TQO	small	subunit	DoxA
GBS_Bsp-like	PF08481.5	gi|15922169|ref|NP_377838.1|	-	0.014	15.2	0.0	0.023	14.5	0.0	1.3	1	0	0	1	1	1	0	GBS	Bsp-like	repeat
SWIM	PF04434.12	gi|15922170|ref|NP_377839.1|	-	0.00027	20.3	0.1	0.00053	19.3	0.1	1.5	1	0	0	1	1	1	1	SWIM	zinc	finger
TPR_1	PF00515.23	gi|15922170|ref|NP_377839.1|	-	0.016	14.7	1.2	0.083	12.5	0.4	2.5	2	0	0	2	2	2	0	Tetratricopeptide	repeat
PTE	PF02126.13	gi|15922170|ref|NP_377839.1|	-	0.061	12.3	1.7	0.44	9.5	0.5	2.1	2	0	0	2	2	2	0	Phosphotriesterase	family
TPR_2	PF07719.12	gi|15922170|ref|NP_377839.1|	-	0.13	12.2	1.3	0.41	10.6	0.2	2.5	2	0	0	2	2	2	0	Tetratricopeptide	repeat
AA_permease_2	PF13520.1	gi|15922171|ref|NP_377840.1|	-	3.4e-39	134.5	66.4	4.4e-39	134.2	46.0	1.1	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|15922171|ref|NP_377840.1|	-	2.5e-10	39.3	53.2	3.2e-10	38.9	36.9	1.1	1	0	0	1	1	1	1	Amino	acid	permease
Fer4_7	PF12838.2	gi|15922172|ref|NP_377841.1|	-	6e-06	26.5	6.2	6e-06	26.5	4.3	1.9	3	0	0	3	3	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|15922172|ref|NP_377841.1|	-	8.1e-06	25.5	6.5	1.4e-05	24.7	4.5	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|15922172|ref|NP_377841.1|	-	9.8e-06	25.7	7.7	9.8e-06	25.7	5.3	1.8	2	0	0	2	2	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|15922172|ref|NP_377841.1|	-	0.00046	19.9	11.6	0.064	13.1	2.0	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|15922172|ref|NP_377841.1|	-	0.00068	19.4	9.1	0.28	11.1	2.1	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_11	PF13247.1	gi|15922172|ref|NP_377841.1|	-	0.00086	19.1	2.0	0.00086	19.1	1.4	1.5	2	0	0	2	2	1	1	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|15922172|ref|NP_377841.1|	-	0.001	18.5	1.3	0.001	18.5	0.9	3.0	2	1	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|15922172|ref|NP_377841.1|	-	0.002	18.1	5.2	0.002	18.1	3.6	2.0	3	0	0	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|15922172|ref|NP_377841.1|	-	1.1	9.8	13.6	0.52	10.7	1.6	2.8	3	0	0	3	3	2	0	4Fe-4S	binding	domain
Fer4_20	PF14691.1	gi|15922172|ref|NP_377841.1|	-	1.1	8.8	7.4	0.28	10.8	1.6	2.2	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_17	PF13534.1	gi|15922172|ref|NP_377841.1|	-	1.3	9.4	11.2	6.6	7.1	0.2	2.7	2	1	2	4	4	3	0	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|15922172|ref|NP_377841.1|	-	1.7	9.4	9.3	12	6.7	0.3	2.6	2	1	0	3	3	2	0	4Fe-4S	double	cluster	binding	domain
Fer4_3	PF12798.2	gi|15922172|ref|NP_377841.1|	-	4.8	7.9	12.5	1.2	9.8	0.5	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
FixQ	PF05545.6	gi|15922173|ref|NP_377842.1|	-	0.0085	15.7	1.9	0.0085	15.7	1.3	3.4	4	0	0	4	4	4	1	Cbb3-type	cytochrome	oxidase	component	FixQ
ERGIC_N	PF13850.1	gi|15922173|ref|NP_377842.1|	-	1.3	9.0	4.2	1.2	9.1	0.6	2.5	1	1	1	2	2	2	0	Endoplasmic	Reticulum-Golgi	Intermediate	Compartment	(ERGIC)
Na_H_Exchanger	PF00999.16	gi|15922174|ref|NP_377843.1|	-	1e-32	113.1	50.4	1.3e-32	112.8	34.9	1.0	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
CBS	PF00571.23	gi|15922174|ref|NP_377843.1|	-	1.2e-14	53.8	1.8	1.8e-07	30.8	0.0	2.5	2	0	0	2	2	2	2	CBS	domain
DUF3211	PF11485.3	gi|15922175|ref|NP_377844.1|	-	6.1e-11	42.5	2.8	1.2e-09	38.3	0.8	2.2	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF3211)
DUF3834	PF12916.2	gi|15922175|ref|NP_377844.1|	-	0.005	15.8	1.0	0.14	11.1	0.1	2.5	2	1	1	3	3	3	1	Protein	of	unknown	function	(DUF3834)
COXG	PF06240.8	gi|15922175|ref|NP_377844.1|	-	0.01	15.4	0.0	0.053	13.1	0.0	2.1	1	1	0	1	1	1	0	Carbon	monoxide	dehydrogenase	subunit	G	(CoxG)
Polyketide_cyc2	PF10604.4	gi|15922175|ref|NP_377844.1|	-	0.04	14.1	0.0	0.061	13.4	0.0	1.2	1	0	0	1	1	1	0	Polyketide	cyclase	/	dehydrase	and	lipid	transport
Pox_D2	PF04701.8	gi|15922175|ref|NP_377844.1|	-	0.042	13.8	1.1	3.6	7.5	0.1	2.6	1	1	2	3	3	3	0	Pox	virus	D2	protein
RepC	PF06504.6	gi|15922175|ref|NP_377844.1|	-	0.16	10.9	0.6	4.8	6.0	0.1	2.0	1	1	1	2	2	2	0	Replication	protein	C	(RepC)
DUF4488	PF14869.1	gi|15922175|ref|NP_377844.1|	-	0.2	11.2	1.8	1.4	8.4	0.1	2.4	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4488)
ThiC	PF01964.13	gi|15922177|ref|NP_377846.1|	-	4.2e-170	565.8	0.0	5e-170	565.5	0.0	1.0	1	0	0	1	1	1	1	ThiC	family
Pyr_redox_2	PF07992.9	gi|15922178|ref|NP_377847.1|	-	3.1e-25	89.2	5.3	1.6e-15	57.5	0.0	4.0	2	1	1	3	3	3	3	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|15922178|ref|NP_377847.1|	-	8.6e-19	67.7	6.3	2.3e-13	50.3	0.3	3.4	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|15922178|ref|NP_377847.1|	-	3.2e-14	52.8	0.0	7.1e-14	51.7	0.0	1.6	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
GIDA	PF01134.17	gi|15922178|ref|NP_377847.1|	-	9.2e-14	51.1	1.1	0.00015	20.7	0.3	4.1	3	1	0	3	3	3	3	Glucose	inhibited	division	protein	A
NAD_binding_8	PF13450.1	gi|15922178|ref|NP_377847.1|	-	2.4e-09	37.0	4.2	0.00066	19.6	0.3	3.3	3	0	0	3	3	3	2	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_3	PF13738.1	gi|15922178|ref|NP_377847.1|	-	2.9e-08	34.0	0.0	1.4e-06	28.5	0.0	2.3	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.19	gi|15922178|ref|NP_377847.1|	-	8.1e-08	31.5	3.5	0.00069	18.5	0.3	3.2	3	0	0	3	3	3	2	FAD	binding	domain
HI0933_like	PF03486.9	gi|15922178|ref|NP_377847.1|	-	9.7e-08	30.8	3.5	5.2e-06	25.1	0.2	3.0	3	1	0	3	3	3	2	HI0933-like	protein
FAD_oxidored	PF12831.2	gi|15922178|ref|NP_377847.1|	-	1.6e-06	27.4	0.2	4.6e-06	25.9	0.0	1.9	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
FAD_binding_3	PF01494.14	gi|15922178|ref|NP_377847.1|	-	0.00065	18.8	1.4	0.023	13.7	0.0	2.2	2	0	0	2	2	2	1	FAD	binding	domain
DAO	PF01266.19	gi|15922178|ref|NP_377847.1|	-	0.0026	16.7	5.0	0.63	8.8	0.1	3.6	3	1	1	4	4	4	2	FAD	dependent	oxidoreductase
Thi4	PF01946.12	gi|15922178|ref|NP_377847.1|	-	0.0035	16.4	0.2	0.049	12.7	0.1	2.2	2	0	0	2	2	2	1	Thi4	family
Epimerase	PF01370.16	gi|15922179|ref|NP_377848.1|	-	1e-14	54.5	0.0	1.4e-14	54.0	0.0	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
NAD_binding_4	PF07993.7	gi|15922179|ref|NP_377848.1|	-	2.2e-10	39.9	0.0	2.8e-10	39.5	0.0	1.2	1	0	0	1	1	1	1	Male	sterility	protein
NmrA	PF05368.8	gi|15922179|ref|NP_377848.1|	-	5.1e-08	32.4	0.3	1.7e-07	30.7	0.2	1.8	1	1	0	1	1	1	1	NmrA-like	family
NAD_binding_10	PF13460.1	gi|15922179|ref|NP_377848.1|	-	7.9e-08	32.5	0.0	9.6e-08	32.2	0.0	1.1	1	0	0	1	1	1	1	NADH(P)-binding
Saccharop_dh	PF03435.13	gi|15922179|ref|NP_377848.1|	-	3.4e-07	29.5	0.1	5.5e-07	28.9	0.0	1.3	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
3Beta_HSD	PF01073.14	gi|15922179|ref|NP_377848.1|	-	8.5e-07	27.9	0.1	1.3e-06	27.3	0.0	1.2	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
RmlD_sub_bind	PF04321.12	gi|15922179|ref|NP_377848.1|	-	4.2e-06	25.8	0.0	5.9e-06	25.3	0.0	1.3	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
TrkA_N	PF02254.13	gi|15922179|ref|NP_377848.1|	-	0.00056	19.8	0.2	0.0011	18.9	0.1	1.5	1	0	0	1	1	1	1	TrkA-N	domain
Pyr_redox	PF00070.22	gi|15922179|ref|NP_377848.1|	-	0.0009	19.6	0.2	0.0076	16.6	0.1	2.6	2	1	1	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
UDPG_MGDP_dh_N	PF03721.9	gi|15922179|ref|NP_377848.1|	-	0.0017	17.7	0.6	0.0025	17.1	0.5	1.3	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
DUF2325	PF10087.4	gi|15922179|ref|NP_377848.1|	-	0.099	12.4	0.1	0.22	11.3	0.1	1.5	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2325)
TrmB	PF01978.14	gi|15922180|ref|NP_377849.1|	-	1.1e-15	57.1	0.0	1.4e-15	56.7	0.0	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|15922180|ref|NP_377849.1|	-	6.2e-10	38.5	0.0	1e-09	37.9	0.0	1.4	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.17	gi|15922180|ref|NP_377849.1|	-	1.1e-08	34.6	0.0	1.6e-08	34.1	0.0	1.2	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.1	gi|15922180|ref|NP_377849.1|	-	3.6e-06	26.2	0.1	6e-06	25.5	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_27	PF13463.1	gi|15922180|ref|NP_377849.1|	-	9.5e-06	25.8	0.0	1.4e-05	25.2	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
TFIIE_alpha	PF02002.12	gi|15922180|ref|NP_377849.1|	-	0.00012	21.5	0.0	0.00014	21.2	0.0	1.2	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HTH_34	PF13601.1	gi|15922180|ref|NP_377849.1|	-	0.00035	20.5	0.0	0.00049	20.0	0.0	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
Mga	PF05043.8	gi|15922180|ref|NP_377849.1|	-	0.00053	20.2	0.2	0.00096	19.3	0.1	1.5	1	1	0	1	1	1	1	Mga	helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|15922180|ref|NP_377849.1|	-	0.0013	18.5	0.2	0.0021	17.9	0.1	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DUF4423	PF14394.1	gi|15922180|ref|NP_377849.1|	-	0.0028	17.2	0.0	0.0037	16.8	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
HTH_36	PF13730.1	gi|15922180|ref|NP_377849.1|	-	0.0035	17.4	0.0	0.0052	16.8	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_29	PF13551.1	gi|15922180|ref|NP_377849.1|	-	0.0036	17.4	0.0	0.0043	17.1	0.0	1.1	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_5	PF01022.15	gi|15922180|ref|NP_377849.1|	-	0.005	16.4	0.0	0.0086	15.7	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
DUF2250	PF10007.4	gi|15922180|ref|NP_377849.1|	-	0.0059	16.4	0.0	0.0099	15.7	0.0	1.4	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_IclR	PF09339.5	gi|15922180|ref|NP_377849.1|	-	0.0062	16.0	0.0	0.0088	15.6	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
GntR	PF00392.16	gi|15922180|ref|NP_377849.1|	-	0.01	15.2	0.1	0.024	14.0	0.0	1.6	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
HTH_20	PF12840.2	gi|15922180|ref|NP_377849.1|	-	0.012	15.3	0.0	0.019	14.7	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|15922180|ref|NP_377849.1|	-	0.015	14.9	0.0	0.026	14.1	0.0	1.5	1	0	0	1	1	1	0	HTH	domain
HTH_Crp_2	PF13545.1	gi|15922180|ref|NP_377849.1|	-	0.028	14.2	0.0	0.053	13.3	0.0	1.4	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
KLRAQ	PF10205.4	gi|15922180|ref|NP_377849.1|	-	0.039	13.9	0.2	0.061	13.3	0.1	1.3	1	0	0	1	1	1	0	Predicted	coiled-coil	domain-containing	protein
Replic_Relax	PF13814.1	gi|15922180|ref|NP_377849.1|	-	0.077	12.8	0.0	0.093	12.5	0.0	1.1	1	0	0	1	1	1	0	Replication-relaxation
RPA_C	PF08784.6	gi|15922180|ref|NP_377849.1|	-	0.1	13.0	0.0	0.15	12.5	0.0	1.3	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
RP-C	PF03428.8	gi|15922180|ref|NP_377849.1|	-	0.11	12.0	0.2	1.5	8.2	0.1	2.0	1	1	0	1	1	1	0	Replication	protein	C	N-terminal	domain
adh_short_C2	PF13561.1	gi|15922181|ref|NP_377850.1|	-	4.9e-31	108.3	0.0	6.3e-31	107.9	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|15922181|ref|NP_377850.1|	-	2e-30	105.9	0.0	3.7e-30	105.0	0.0	1.4	2	0	0	2	2	2	1	short	chain	dehydrogenase
KR	PF08659.5	gi|15922181|ref|NP_377850.1|	-	3e-13	49.8	0.0	5.2e-13	49.0	0.0	1.3	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.16	gi|15922181|ref|NP_377850.1|	-	1.2e-07	31.4	0.0	1.9e-07	30.7	0.0	1.5	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
NmrA	PF05368.8	gi|15922181|ref|NP_377850.1|	-	1.7e-06	27.4	0.2	4.2e-06	26.1	0.0	1.7	2	0	0	2	2	2	1	NmrA-like	family
NAD_binding_10	PF13460.1	gi|15922181|ref|NP_377850.1|	-	3.9e-06	27.0	0.1	6e-06	26.3	0.0	1.6	1	1	0	1	1	1	1	NADH(P)-binding
3Beta_HSD	PF01073.14	gi|15922181|ref|NP_377850.1|	-	7.2e-06	24.9	0.0	1.6e-05	23.7	0.0	1.6	2	0	0	2	2	2	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
TrkA_N	PF02254.13	gi|15922181|ref|NP_377850.1|	-	0.0019	18.1	0.5	0.0073	16.3	0.1	2.0	2	0	0	2	2	2	1	TrkA-N	domain
F420_oxidored	PF03807.12	gi|15922181|ref|NP_377850.1|	-	0.014	15.7	0.5	0.43	11.0	0.0	2.7	3	0	0	3	3	3	0	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_4	PF07993.7	gi|15922181|ref|NP_377850.1|	-	0.031	13.1	0.2	0.56	9.0	0.2	2.2	1	1	0	1	1	1	0	Male	sterility	protein
Polysacc_synt_2	PF02719.10	gi|15922181|ref|NP_377850.1|	-	0.032	13.1	0.0	0.046	12.6	0.0	1.3	1	0	0	1	1	1	0	Polysaccharide	biosynthesis	protein
Glyco_trans_4_4	PF13579.1	gi|15922181|ref|NP_377850.1|	-	0.046	13.8	0.0	0.35	11.0	0.0	2.0	2	0	0	2	2	2	0	Glycosyl	transferase	4-like	domain
ACT	PF01842.20	gi|15922181|ref|NP_377850.1|	-	0.083	12.4	0.0	0.19	11.2	0.0	1.6	1	0	0	1	1	1	0	ACT	domain
UPF0728	PF15092.1	gi|15922182|ref|NP_377851.1|	-	0.029	14.2	0.5	0.052	13.4	0.3	1.6	1	1	0	1	1	1	0	Uncharacterised	protein	family	UPF0728
CCG	PF02754.11	gi|15922183|ref|NP_377852.1|	-	2.9e-28	97.6	0.2	1.6e-15	56.8	0.0	2.6	3	0	0	3	3	3	2	Cysteine-rich	domain
Fer4_8	PF13183.1	gi|15922184|ref|NP_377853.1|	-	1.9e-10	40.6	7.4	2.8e-10	40.0	5.2	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|15922184|ref|NP_377853.1|	-	3.4e-09	36.9	7.1	5.4e-09	36.2	4.9	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|15922184|ref|NP_377853.1|	-	1e-07	32.0	6.9	2.4e-07	30.9	4.8	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|15922184|ref|NP_377853.1|	-	4.9e-06	26.8	2.2	0.0033	17.8	0.2	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|15922184|ref|NP_377853.1|	-	6.3e-06	26.4	6.6	1.1e-05	25.7	4.6	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|15922184|ref|NP_377853.1|	-	0.00012	22.7	2.2	0.014	16.1	0.3	2.4	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Fer4_10	PF13237.1	gi|15922184|ref|NP_377853.1|	-	0.00041	20.0	11.7	0.0029	17.3	8.6	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|15922184|ref|NP_377853.1|	-	0.0016	18.2	9.1	0.15	12.0	1.0	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|15922184|ref|NP_377853.1|	-	0.021	15.1	12.4	0.49	10.8	1.4	2.2	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|15922184|ref|NP_377853.1|	-	0.042	13.7	9.5	0.19	11.6	6.6	1.9	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|15922184|ref|NP_377853.1|	-	0.16	11.6	13.4	0.16	11.6	1.5	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_20	PF14691.1	gi|15922184|ref|NP_377853.1|	-	0.39	10.3	6.9	0.13	11.9	0.3	2.2	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
IZUMO	PF15005.1	gi|15922184|ref|NP_377853.1|	-	0.56	10.2	4.7	1.6	8.7	0.5	2.4	2	0	0	2	2	2	0	Izumo	sperm-egg	fusion
Fer4_15	PF13459.1	gi|15922184|ref|NP_377853.1|	-	0.61	10.6	3.1	0.73	10.4	0.1	2.3	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
DUF1664	PF07889.7	gi|15922185|ref|NP_377854.1|	-	0.081	12.7	1.0	0.66	9.7	0.3	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1664)
DUF4600	PF15372.1	gi|15922185|ref|NP_377854.1|	-	0.26	11.5	1.3	0.59	10.3	0.9	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4600)
Pyr_redox_2	PF07992.9	gi|15922186|ref|NP_377855.1|	-	2.3e-14	53.7	0.0	4.2e-14	52.8	0.0	1.5	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|15922186|ref|NP_377855.1|	-	1.3e-09	37.5	0.4	2.5e-07	30.0	0.3	2.2	1	1	1	2	2	2	1	FAD	binding	domain
FAD_binding_2	PF00890.19	gi|15922186|ref|NP_377855.1|	-	2.2e-09	36.7	0.7	6.1e-06	25.3	0.5	2.1	1	1	1	2	2	2	2	FAD	binding	domain
HI0933_like	PF03486.9	gi|15922186|ref|NP_377855.1|	-	2.5e-09	36.1	0.9	0.00038	19.0	0.2	2.1	1	1	1	2	2	2	2	HI0933-like	protein
Pyr_redox_3	PF13738.1	gi|15922186|ref|NP_377855.1|	-	4.2e-08	33.4	0.5	0.00033	20.7	0.1	2.2	1	1	1	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_oxidored	PF12831.2	gi|15922186|ref|NP_377855.1|	-	6.6e-08	32.0	0.4	5.2e-06	25.7	0.2	2.2	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
DAO	PF01266.19	gi|15922186|ref|NP_377855.1|	-	1.6e-07	30.6	0.3	2.7e-05	23.2	0.1	2.6	3	0	0	3	3	3	1	FAD	dependent	oxidoreductase
GIDA	PF01134.17	gi|15922186|ref|NP_377855.1|	-	5.4e-07	28.8	0.5	0.00036	19.4	0.1	2.7	3	0	0	3	3	3	2	Glucose	inhibited	division	protein	A
Pyr_redox	PF00070.22	gi|15922186|ref|NP_377855.1|	-	7.3e-07	29.5	0.8	0.0012	19.1	0.1	2.4	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Amino_oxidase	PF01593.19	gi|15922186|ref|NP_377855.1|	-	2.2e-06	27.0	0.3	0.04	12.9	0.1	3.1	3	0	0	3	3	3	2	Flavin	containing	amine	oxidoreductase
NAD_binding_8	PF13450.1	gi|15922186|ref|NP_377855.1|	-	1.4e-05	25.0	0.0	3.4e-05	23.7	0.0	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.12	gi|15922186|ref|NP_377855.1|	-	2.6e-05	23.4	0.0	4.1e-05	22.8	0.0	1.4	1	0	0	1	1	1	1	Thi4	family
NAD_binding_9	PF13454.1	gi|15922186|ref|NP_377855.1|	-	0.0003	20.5	0.0	0.077	12.7	0.0	2.9	3	0	0	3	3	3	1	FAD-NAD(P)-binding
Lycopene_cycl	PF05834.7	gi|15922186|ref|NP_377855.1|	-	0.00087	18.3	0.1	0.004	16.1	0.0	1.8	1	1	1	2	2	2	1	Lycopene	cyclase	protein
CPSase_L_chain	PF00289.17	gi|15922186|ref|NP_377855.1|	-	0.011	15.7	0.0	0.024	14.7	0.0	1.6	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
Shikimate_DH	PF01488.15	gi|15922186|ref|NP_377855.1|	-	0.012	15.6	0.2	0.026	14.6	0.1	1.6	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
FLgD_tudor	PF13861.1	gi|15922186|ref|NP_377855.1|	-	0.021	14.8	0.2	0.23	11.5	0.0	2.2	2	0	0	2	2	2	0	FlgD	Tudor-like	domain
AlaDh_PNT_C	PF01262.16	gi|15922186|ref|NP_377855.1|	-	0.022	14.3	0.8	0.19	11.2	0.2	2.3	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
NAD_binding_7	PF13241.1	gi|15922186|ref|NP_377855.1|	-	0.023	14.9	0.1	0.054	13.7	0.1	1.7	1	1	0	1	1	1	0	Putative	NAD(P)-binding
K_oxygenase	PF13434.1	gi|15922186|ref|NP_377855.1|	-	0.031	13.2	0.2	0.14	11.0	0.0	1.9	2	0	0	2	2	2	0	L-lysine	6-monooxygenase	(NADPH-requiring)
IlvN	PF07991.7	gi|15922186|ref|NP_377855.1|	-	0.031	13.6	0.0	0.061	12.6	0.0	1.5	1	0	0	1	1	1	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
PEPcase_2	PF14010.1	gi|15922186|ref|NP_377855.1|	-	0.094	11.0	0.0	0.14	10.4	0.0	1.1	1	0	0	1	1	1	0	Phosphoenolpyruvate	carboxylase
NAD_binding_10	PF13460.1	gi|15922186|ref|NP_377855.1|	-	0.15	12.0	0.2	0.3	11.0	0.1	1.5	1	0	0	1	1	1	0	NADH(P)-binding
Trp_halogenase	PF04820.9	gi|15922186|ref|NP_377855.1|	-	0.28	9.7	1.2	2	6.9	0.1	2.1	2	0	0	2	2	2	0	Tryptophan	halogenase
CCG	PF02754.11	gi|15922187|ref|NP_377856.1|	-	7.2e-08	32.3	0.0	2.6e-06	27.3	0.0	2.9	2	1	0	2	2	2	1	Cysteine-rich	domain
HNH	PF01844.18	gi|15922187|ref|NP_377856.1|	-	0.097	12.5	0.4	6.4	6.7	0.1	2.8	2	0	0	2	2	2	0	HNH	endonuclease
Fer4_8	PF13183.1	gi|15922188|ref|NP_377857.1|	-	4.8e-10	39.3	6.4	8.9e-10	38.4	4.4	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|15922188|ref|NP_377857.1|	-	1.6e-08	34.7	6.5	1.6e-08	34.7	4.5	1.7	2	0	0	2	2	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|15922188|ref|NP_377857.1|	-	7.5e-06	26.1	8.5	2e-05	24.7	5.9	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|15922188|ref|NP_377857.1|	-	1.3e-05	25.5	5.8	0.026	14.9	0.1	2.6	3	0	0	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|15922188|ref|NP_377857.1|	-	2.1e-05	24.1	8.9	4.9e-05	23.0	6.1	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|15922188|ref|NP_377857.1|	-	2.6e-05	23.8	8.1	0.0078	16.0	0.9	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|15922188|ref|NP_377857.1|	-	0.00081	19.7	10.4	0.0058	16.9	7.7	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|15922188|ref|NP_377857.1|	-	0.0014	18.7	11.1	0.0023	18.1	0.8	2.2	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|15922188|ref|NP_377857.1|	-	0.017	15.0	8.8	0.13	12.1	6.3	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_20	PF14691.1	gi|15922188|ref|NP_377857.1|	-	0.025	14.2	5.4	0.12	12.0	0.3	2.3	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_16	PF13484.1	gi|15922188|ref|NP_377857.1|	-	0.065	13.9	11.4	0.5	11.1	8.0	2.4	1	1	1	2	2	2	0	4Fe-4S	double	cluster	binding	domain
Fer4	PF00037.22	gi|15922188|ref|NP_377857.1|	-	0.27	10.9	16.9	0.12	11.9	1.9	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|15922188|ref|NP_377857.1|	-	0.53	10.2	13.0	2.5	8.0	1.4	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_13	PF13370.1	gi|15922188|ref|NP_377857.1|	-	2	8.8	7.8	3.1	8.2	0.2	2.8	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
TusA	PF01206.12	gi|15922189|ref|NP_377858.1|	-	9.7e-24	82.7	0.0	1.1e-23	82.5	0.0	1.0	1	0	0	1	1	1	1	Sulfurtransferase	TusA
DrsE_2	PF13686.1	gi|15922190|ref|NP_377859.1|	-	8.7e-24	83.9	1.6	1.7e-23	83.0	1.1	1.4	1	1	0	1	1	1	1	DsrE/DsrF/DrsH-like	family
DrsE	PF02635.10	gi|15922190|ref|NP_377859.1|	-	5.9e-08	32.7	0.0	1.9e-07	31.1	0.0	1.6	1	1	0	1	1	1	1	DsrE/DsrF-like	family
DrsE	PF02635.10	gi|15922191|ref|NP_377860.1|	-	4.9e-17	62.1	0.0	5.4e-17	61.9	0.0	1.0	1	0	0	1	1	1	1	DsrE/DsrF-like	family
DrsE_2	PF13686.1	gi|15922191|ref|NP_377860.1|	-	1.7e-14	53.8	0.3	2.1e-06	27.5	0.1	2.0	1	1	1	2	2	2	2	DsrE/DsrF/DrsH-like	family
DUF4318	PF14201.1	gi|15922192|ref|NP_377861.1|	-	0.041	13.7	0.0	0.071	12.9	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4318)
Pyr_redox_2	PF07992.9	gi|15922193|ref|NP_377862.1|	-	4.3e-33	114.8	9.2	2.2e-18	66.8	0.1	3.7	2	1	1	3	3	3	3	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|15922193|ref|NP_377862.1|	-	1.9e-16	60.0	0.2	7.6e-16	58.1	0.0	2.1	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.22	gi|15922193|ref|NP_377862.1|	-	1.2e-15	57.6	10.2	3.3e-14	53.0	0.5	3.0	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|15922193|ref|NP_377862.1|	-	6.6e-15	55.7	0.0	1.1e-14	54.9	0.0	1.3	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|15922193|ref|NP_377862.1|	-	3.2e-10	39.4	11.1	2.2e-05	23.5	0.1	4.2	3	1	2	5	5	5	2	Glucose	inhibited	division	protein	A
DAO	PF01266.19	gi|15922193|ref|NP_377862.1|	-	8.4e-10	38.0	6.0	8.6e-05	21.5	0.4	3.7	4	0	0	4	4	4	2	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|15922193|ref|NP_377862.1|	-	5.7e-09	35.3	9.3	1.1e-06	27.8	1.1	3.1	3	0	0	3	3	3	2	FAD	binding	domain
FAD_binding_3	PF01494.14	gi|15922193|ref|NP_377862.1|	-	5.4e-08	32.2	1.8	0.00011	21.4	0.2	2.2	2	0	0	2	2	2	2	FAD	binding	domain
K_oxygenase	PF13434.1	gi|15922193|ref|NP_377862.1|	-	3.7e-07	29.3	0.0	7.1e-05	21.8	0.0	2.4	1	1	0	2	2	2	1	L-lysine	6-monooxygenase	(NADPH-requiring)
HI0933_like	PF03486.9	gi|15922193|ref|NP_377862.1|	-	6.6e-07	28.1	3.6	0.0014	17.1	0.3	3.2	3	0	0	3	3	3	2	HI0933-like	protein
Thi4	PF01946.12	gi|15922193|ref|NP_377862.1|	-	9.9e-07	28.0	6.8	6.8e-05	22.0	0.6	2.9	3	0	0	3	3	3	2	Thi4	family
Trp_halogenase	PF04820.9	gi|15922193|ref|NP_377862.1|	-	2e-06	26.7	4.1	3.4e-05	22.6	0.2	2.2	2	0	0	2	2	2	2	Tryptophan	halogenase
AlaDh_PNT_C	PF01262.16	gi|15922193|ref|NP_377862.1|	-	3.5e-06	26.7	0.3	9.7e-05	21.9	0.0	2.3	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
FAD_oxidored	PF12831.2	gi|15922193|ref|NP_377862.1|	-	1.3e-05	24.4	2.4	0.00022	20.4	0.1	2.2	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
NAD_binding_7	PF13241.1	gi|15922193|ref|NP_377862.1|	-	8.1e-05	22.8	0.2	0.088	13.0	0.0	2.6	2	0	0	2	2	2	2	Putative	NAD(P)-binding
NAD_binding_8	PF13450.1	gi|15922193|ref|NP_377862.1|	-	0.0003	20.7	7.6	0.014	15.4	1.4	2.5	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
NAD_Gly3P_dh_N	PF01210.18	gi|15922193|ref|NP_377862.1|	-	0.00045	19.9	0.7	0.014	15.1	0.0	2.5	2	0	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
3HCDH_N	PF02737.13	gi|15922193|ref|NP_377862.1|	-	0.00046	19.8	2.1	0.0017	17.9	0.0	2.2	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Lycopene_cycl	PF05834.7	gi|15922193|ref|NP_377862.1|	-	0.0012	17.8	0.1	0.51	9.1	0.0	2.3	2	0	0	2	2	2	2	Lycopene	cyclase	protein
2-Hacid_dh_C	PF02826.14	gi|15922193|ref|NP_377862.1|	-	0.0029	16.7	0.0	0.037	13.1	0.0	2.4	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
TrkA_N	PF02254.13	gi|15922193|ref|NP_377862.1|	-	0.26	11.3	6.8	1.5	8.8	0.1	3.2	3	0	0	3	3	3	0	TrkA-N	domain
Shikimate_DH	PF01488.15	gi|15922193|ref|NP_377862.1|	-	0.47	10.5	5.4	0.28	11.3	0.3	2.6	2	1	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
Thioredoxin_3	PF13192.1	gi|15922195|ref|NP_377864.1|	-	2.6e-13	49.5	0.0	8.7e-13	47.8	0.0	1.8	2	0	0	2	2	2	1	Thioredoxin	domain
DUF836	PF05768.9	gi|15922195|ref|NP_377864.1|	-	0.00018	21.7	0.1	0.00049	20.2	0.0	1.8	2	0	0	2	2	2	1	Glutaredoxin-like	domain	(DUF836)
Thioredoxin_2	PF13098.1	gi|15922195|ref|NP_377864.1|	-	0.014	15.6	0.6	0.035	14.2	0.4	2.1	1	1	0	1	1	1	0	Thioredoxin-like	domain
Glutaredoxin	PF00462.19	gi|15922195|ref|NP_377864.1|	-	0.017	15.1	0.0	0.044	13.7	0.0	1.7	1	0	0	1	1	1	0	Glutaredoxin
Thioredoxin	PF00085.15	gi|15922195|ref|NP_377864.1|	-	0.069	12.8	0.0	0.12	12.0	0.0	1.5	1	0	0	1	1	1	0	Thioredoxin
UPF0278	PF08745.6	gi|15922196|ref|NP_377865.1|	-	0.00028	20.1	0.0	0.00045	19.5	0.0	1.3	1	0	0	1	1	1	1	UPF0278	family
PIN	PF01850.16	gi|15922196|ref|NP_377865.1|	-	0.015	15.6	0.1	0.026	14.8	0.1	1.5	1	1	0	1	1	1	0	PIN	domain
DUF708	PF05341.6	gi|15922196|ref|NP_377865.1|	-	0.1	12.4	0.3	0.18	11.6	0.1	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF708)
DUF1641	PF07849.6	gi|15922197|ref|NP_377866.1|	-	1.6e-11	43.6	0.1	4.7e-11	42.1	0.0	1.9	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1641)
MgtE_N	PF03448.12	gi|15922197|ref|NP_377866.1|	-	0.00043	20.5	39.7	2.6	8.4	4.0	7.7	1	1	6	7	7	7	4	MgtE	intracellular	N	domain
HEAT	PF02985.17	gi|15922197|ref|NP_377866.1|	-	0.1	12.7	4.6	26	5.2	0.0	5.5	7	0	0	7	7	7	0	HEAT	repeat
Turandot	PF07240.6	gi|15922197|ref|NP_377866.1|	-	0.12	11.9	1.2	67	3.0	0.0	4.3	2	2	3	5	5	5	0	Stress-inducible	humoral	factor	Turandot
DUF4108	PF13390.1	gi|15922197|ref|NP_377866.1|	-	0.2	11.4	0.6	43	3.8	0.0	3.2	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF4108)
Sin3_corepress	PF08295.7	gi|15922197|ref|NP_377866.1|	-	1.6	8.5	6.1	5.7	6.7	0.1	4.2	4	1	1	5	5	5	0	Sin3	family	co-repressor
Hist_deacetyl	PF00850.14	gi|15922198|ref|NP_377867.1|	-	3.4e-52	177.6	0.0	4.6e-52	177.2	0.0	1.1	1	0	0	1	1	1	1	Histone	deacetylase	domain
Peptidase_M23	PF01551.17	gi|15922199|ref|NP_377868.1|	-	0.0009	19.2	0.0	0.0019	18.1	0.0	1.6	1	1	0	1	1	1	1	Peptidase	family	M23
Radical_SAM	PF04055.16	gi|15922200|ref|NP_377869.1|	-	6.8e-12	45.8	1.0	1.8e-11	44.4	0.1	1.9	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|15922200|ref|NP_377869.1|	-	0.049	13.7	0.0	0.11	12.6	0.0	1.6	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
Radical_SAM	PF04055.16	gi|15922201|ref|NP_377870.1|	-	6.1e-12	46.0	0.1	5.1e-10	39.7	0.0	2.4	1	1	1	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|15922201|ref|NP_377870.1|	-	0.011	15.8	0.0	0.018	15.1	0.0	1.3	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
zf-C3HC	PF07967.8	gi|15922201|ref|NP_377870.1|	-	0.067	12.9	0.0	0.11	12.2	0.0	1.4	1	0	0	1	1	1	0	C3HC	zinc	finger-like
BPL_LplA_LipB	PF03099.14	gi|15922202|ref|NP_377871.1|	-	2e-14	53.6	0.1	3.6e-14	52.8	0.0	1.4	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
Lip_prot_lig_C	PF10437.4	gi|15922202|ref|NP_377871.1|	-	0.00059	19.4	0.5	0.0016	18.0	0.3	1.7	1	0	0	1	1	1	1	Bacterial	lipoate	protein	ligase	C-terminus
TrmB	PF01978.14	gi|15922203|ref|NP_377872.1|	-	1.7e-09	37.2	0.3	2.2e-09	36.9	0.2	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_27	PF13463.1	gi|15922203|ref|NP_377872.1|	-	1.1e-07	32.0	0.1	1.9e-07	31.2	0.1	1.5	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_5	PF01022.15	gi|15922203|ref|NP_377872.1|	-	7.6e-07	28.6	0.1	1.2e-06	28.1	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
MarR_2	PF12802.2	gi|15922203|ref|NP_377872.1|	-	7.8e-07	28.6	0.0	1.1e-06	28.2	0.0	1.2	1	0	0	1	1	1	1	MarR	family
HTH_11	PF08279.7	gi|15922203|ref|NP_377872.1|	-	1.1e-06	28.1	0.3	2.1e-06	27.3	0.2	1.4	1	0	0	1	1	1	1	HTH	domain
HTH_24	PF13412.1	gi|15922203|ref|NP_377872.1|	-	1.1e-05	24.7	0.1	1.7e-05	24.0	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
GntR	PF00392.16	gi|15922203|ref|NP_377872.1|	-	1.2e-05	24.6	0.3	4.1e-05	22.9	0.1	1.8	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	gntR	family
TFIIE_alpha	PF02002.12	gi|15922203|ref|NP_377872.1|	-	1.3e-05	24.6	1.0	1.5e-05	24.3	0.5	1.3	1	1	0	1	1	1	1	TFIIE	alpha	subunit
HTH_20	PF12840.2	gi|15922203|ref|NP_377872.1|	-	2.4e-05	24.0	0.0	3.4e-05	23.5	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR	PF01047.17	gi|15922203|ref|NP_377872.1|	-	2.5e-05	23.8	0.1	3.7e-05	23.3	0.1	1.3	1	0	0	1	1	1	1	MarR	family
HTH_Crp_2	PF13545.1	gi|15922203|ref|NP_377872.1|	-	5.4e-05	22.9	0.0	0.00031	20.4	0.0	1.9	1	1	1	2	2	2	1	Crp-like	helix-turn-helix	domain
HTH_DeoR	PF08220.7	gi|15922203|ref|NP_377872.1|	-	9.6e-05	21.8	0.6	0.0002	20.7	0.1	1.7	2	0	0	2	2	2	1	DeoR-like	helix-turn-helix	domain
HTH_36	PF13730.1	gi|15922203|ref|NP_377872.1|	-	0.00013	21.9	0.1	0.00021	21.3	0.1	1.5	1	1	0	1	1	1	1	Helix-turn-helix	domain
EAP30	PF04157.11	gi|15922203|ref|NP_377872.1|	-	0.00044	19.4	0.2	0.0029	16.8	0.1	1.9	2	0	0	2	2	2	1	EAP30/Vps36	family
FeoC	PF09012.5	gi|15922203|ref|NP_377872.1|	-	0.00048	19.7	0.0	0.00087	18.9	0.0	1.4	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
PadR	PF03551.9	gi|15922203|ref|NP_377872.1|	-	0.00048	19.8	0.1	0.019	14.6	0.1	2.1	2	0	0	2	2	2	1	Transcriptional	regulator	PadR-like	family
DUF387	PF04079.11	gi|15922203|ref|NP_377872.1|	-	0.00049	19.4	0.1	0.0006	19.2	0.1	1.1	1	0	0	1	1	1	1	Putative	transcriptional	regulators	(Ypuh-like)
Fe_dep_repress	PF01325.14	gi|15922203|ref|NP_377872.1|	-	0.00065	19.5	0.1	0.0013	18.6	0.1	1.6	1	1	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DUF4423	PF14394.1	gi|15922203|ref|NP_377872.1|	-	0.00073	19.1	0.9	0.0024	17.4	0.6	1.8	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
Rrf2	PF02082.15	gi|15922203|ref|NP_377872.1|	-	0.0008	19.4	0.2	0.0023	18.0	0.0	1.7	2	0	0	2	2	2	1	Transcriptional	regulator
HTH_IclR	PF09339.5	gi|15922203|ref|NP_377872.1|	-	0.0019	17.7	0.0	0.0026	17.3	0.0	1.2	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
Phage_rep_org_N	PF09681.5	gi|15922203|ref|NP_377872.1|	-	0.0032	17.0	0.2	0.0068	15.9	0.1	1.5	1	1	1	2	2	2	1	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
HrcA_DNA-bdg	PF03444.10	gi|15922203|ref|NP_377872.1|	-	0.0032	16.8	0.2	0.0054	16.1	0.1	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
B-block_TFIIIC	PF04182.7	gi|15922203|ref|NP_377872.1|	-	0.0033	17.2	0.1	0.0057	16.4	0.1	1.4	1	1	0	1	1	1	1	B-block	binding	subunit	of	TFIIIC
Phage_rep_O	PF04492.8	gi|15922203|ref|NP_377872.1|	-	0.008	16.3	0.0	0.0098	16.0	0.0	1.4	1	0	0	1	1	1	1	Bacteriophage	replication	protein	O
HTH_10	PF04967.7	gi|15922203|ref|NP_377872.1|	-	0.0096	15.4	0.0	0.023	14.2	0.0	1.6	1	0	0	1	1	1	1	HTH	DNA	binding	domain
RP-C	PF03428.8	gi|15922203|ref|NP_377872.1|	-	0.013	14.9	0.1	0.83	9.0	0.1	2.1	1	1	0	1	1	1	0	Replication	protein	C	N-terminal	domain
PCI	PF01399.22	gi|15922203|ref|NP_377872.1|	-	0.03	14.6	0.2	0.061	13.6	0.1	1.4	1	0	0	1	1	1	0	PCI	domain
DUF2250	PF10007.4	gi|15922203|ref|NP_377872.1|	-	0.036	13.9	1.0	0.057	13.3	0.6	1.6	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF1670	PF07900.6	gi|15922203|ref|NP_377872.1|	-	0.058	12.6	0.6	0.14	11.3	0.1	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1670)
GerE	PF00196.14	gi|15922203|ref|NP_377872.1|	-	0.077	12.3	0.3	0.2	10.9	0.0	1.9	2	1	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
RuvB_C	PF05491.8	gi|15922203|ref|NP_377872.1|	-	0.081	12.5	0.1	0.12	12.0	0.1	1.2	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	ruvB	C-terminus
DUF1492	PF07374.6	gi|15922203|ref|NP_377872.1|	-	0.081	13.0	0.6	0.14	12.2	0.4	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1492)
Rio2_N	PF09202.6	gi|15922203|ref|NP_377872.1|	-	0.11	12.5	0.1	0.16	12.0	0.0	1.4	1	0	0	1	1	1	0	Rio2,	N-terminal
ORC5_C	PF14630.1	gi|15922203|ref|NP_377872.1|	-	0.12	11.8	0.0	0.12	11.7	0.0	1.1	1	0	0	1	1	1	0	Origin	recognition	complex	(ORC)	subunit	5	C-terminus
DUF1627	PF07789.7	gi|15922203|ref|NP_377872.1|	-	0.12	11.8	0.0	0.16	11.4	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1627)
HRDC	PF00570.18	gi|15922203|ref|NP_377872.1|	-	0.13	11.9	0.1	0.37	10.5	0.1	1.7	2	0	0	2	2	1	0	HRDC	domain
TusA	PF01206.12	gi|15922204|ref|NP_377873.1|	-	9.9e-13	47.5	0.2	1.2e-12	47.2	0.1	1.1	1	0	0	1	1	1	1	Sulfurtransferase	TusA
SIS_2	PF13580.1	gi|15922205|ref|NP_377874.1|	-	0.076	12.7	0.0	0.092	12.4	0.0	1.2	1	0	0	1	1	1	0	SIS	domain
TrmB	PF01978.14	gi|15922206|ref|NP_377875.1|	-	3.4e-14	52.2	0.3	4.5e-14	51.9	0.2	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.17	gi|15922206|ref|NP_377875.1|	-	1.8e-09	37.1	0.2	3e-09	36.4	0.2	1.3	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.2	gi|15922206|ref|NP_377875.1|	-	6.3e-09	35.3	0.0	8.4e-09	34.9	0.0	1.2	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.1	gi|15922206|ref|NP_377875.1|	-	1.4e-07	30.7	0.1	1.4e-07	30.7	0.1	1.5	2	0	0	2	2	1	1	Winged	helix-turn-helix	DNA-binding
TFIIE_alpha	PF02002.12	gi|15922206|ref|NP_377875.1|	-	3.1e-07	29.8	0.6	4.5e-07	29.3	0.4	1.4	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HTH_27	PF13463.1	gi|15922206|ref|NP_377875.1|	-	2.8e-05	24.3	0.0	4.6e-05	23.6	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
Fe_dep_repress	PF01325.14	gi|15922206|ref|NP_377875.1|	-	0.00056	19.7	0.1	0.0011	18.8	0.1	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
GntR	PF00392.16	gi|15922206|ref|NP_377875.1|	-	0.00057	19.2	0.1	0.001	18.4	0.1	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HTH_5	PF01022.15	gi|15922206|ref|NP_377875.1|	-	0.00063	19.3	0.0	0.0011	18.6	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_DeoR	PF08220.7	gi|15922206|ref|NP_377875.1|	-	0.00069	19.0	0.2	0.0014	18.1	0.1	1.4	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
Penicillinase_R	PF03965.11	gi|15922206|ref|NP_377875.1|	-	0.00072	19.6	0.1	0.001	19.1	0.1	1.3	1	0	0	1	1	1	1	Penicillinase	repressor
DUF4393	PF14337.1	gi|15922206|ref|NP_377875.1|	-	0.00086	18.7	0.1	0.0011	18.4	0.1	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4393)
HTH_IclR	PF09339.5	gi|15922206|ref|NP_377875.1|	-	0.0011	18.5	0.0	0.0015	18.0	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_11	PF08279.7	gi|15922206|ref|NP_377875.1|	-	0.0016	18.0	0.2	0.0027	17.3	0.1	1.4	1	0	0	1	1	1	1	HTH	domain
HTH_34	PF13601.1	gi|15922206|ref|NP_377875.1|	-	0.0027	17.6	0.2	0.0042	17.0	0.2	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
DUF4423	PF14394.1	gi|15922206|ref|NP_377875.1|	-	0.0031	17.0	0.1	0.0045	16.5	0.1	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
Replic_Relax	PF13814.1	gi|15922206|ref|NP_377875.1|	-	0.0032	17.3	0.0	0.0039	17.0	0.0	1.1	1	0	0	1	1	1	1	Replication-relaxation
HTH_36	PF13730.1	gi|15922206|ref|NP_377875.1|	-	0.0033	17.5	0.1	0.006	16.6	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
Rio2_N	PF09202.6	gi|15922206|ref|NP_377875.1|	-	0.0033	17.4	0.3	0.0065	16.5	0.2	1.6	1	1	0	1	1	1	1	Rio2,	N-terminal
HTH_20	PF12840.2	gi|15922206|ref|NP_377875.1|	-	0.0035	17.1	0.0	0.0052	16.5	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_Crp_2	PF13545.1	gi|15922206|ref|NP_377875.1|	-	0.005	16.5	0.0	0.008	15.9	0.0	1.3	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
Mga	PF05043.8	gi|15922206|ref|NP_377875.1|	-	0.006	16.8	0.5	0.011	15.9	0.3	1.6	1	1	0	1	1	1	1	Mga	helix-turn-helix	domain
DUF387	PF04079.11	gi|15922206|ref|NP_377875.1|	-	0.0088	15.4	0.1	0.012	15.0	0.1	1.3	1	1	0	1	1	1	1	Putative	transcriptional	regulators	(Ypuh-like)
PadR	PF03551.9	gi|15922206|ref|NP_377875.1|	-	0.014	15.1	0.1	0.022	14.5	0.1	1.5	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
B-block_TFIIIC	PF04182.7	gi|15922206|ref|NP_377875.1|	-	0.029	14.2	0.2	0.061	13.1	0.1	1.6	1	1	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
HTH_Mga	PF08280.6	gi|15922206|ref|NP_377875.1|	-	0.03	14.0	0.2	0.03	14.0	0.2	1.9	3	0	0	3	3	1	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
Phage_rep_O	PF04492.8	gi|15922206|ref|NP_377875.1|	-	0.067	13.4	0.1	0.22	11.7	0.1	1.9	1	1	0	1	1	1	0	Bacteriophage	replication	protein	O
FAM91_N	PF14647.1	gi|15922206|ref|NP_377875.1|	-	0.082	11.9	0.1	0.1	11.6	0.0	1.2	1	0	0	1	1	1	0	FAM91	N-terminus
HTH_9	PF08221.6	gi|15922206|ref|NP_377875.1|	-	0.083	12.7	0.2	0.14	12.0	0.1	1.3	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
Rep_3	PF01051.16	gi|15922207|ref|NP_377876.1|	-	0.014	15.0	1.0	0.018	14.6	0.7	1.1	1	0	0	1	1	1	0	Initiator	Replication	protein
KAP	PF05804.7	gi|15922207|ref|NP_377876.1|	-	0.023	12.6	0.2	0.027	12.4	0.2	1.0	1	0	0	1	1	1	0	Kinesin-associated	protein	(KAP)
SapB_1	PF05184.10	gi|15922207|ref|NP_377876.1|	-	0.048	13.5	0.1	0.11	12.3	0.0	1.5	1	0	0	1	1	1	0	Saposin-like	type	B,	region	1
DUF1886	PF09171.5	gi|15922207|ref|NP_377876.1|	-	0.06	12.3	0.1	0.07	12.1	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1886)
PqqD	PF05402.7	gi|15922207|ref|NP_377876.1|	-	0.073	13.0	0.0	0.13	12.3	0.0	1.4	1	0	0	1	1	1	0	Coenzyme	PQQ	synthesis	protein	D	(PqqD)
QueC	PF06508.8	gi|15922208|ref|NP_377877.1|	-	6.5e-31	107.2	0.1	2.7e-29	101.9	0.1	2.0	1	1	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
ThiI	PF02568.9	gi|15922208|ref|NP_377877.1|	-	8.8e-07	28.5	0.0	1.2e-06	28.1	0.0	1.3	1	1	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
tRNA_Me_trans	PF03054.11	gi|15922208|ref|NP_377877.1|	-	0.0084	14.6	0.0	0.014	13.9	0.0	1.4	1	0	0	1	1	1	1	tRNA	methyl	transferase
NAD_synthase	PF02540.12	gi|15922208|ref|NP_377877.1|	-	0.037	12.9	0.0	0.088	11.6	0.0	1.7	2	0	0	2	2	2	0	NAD	synthase
ATP_bind_3	PF01171.15	gi|15922208|ref|NP_377877.1|	-	0.11	11.9	0.0	0.36	10.3	0.0	1.8	3	0	0	3	3	3	0	PP-loop	family
Asn_synthase	PF00733.16	gi|15922208|ref|NP_377877.1|	-	0.12	11.8	0.0	0.14	11.6	0.0	1.2	1	0	0	1	1	1	0	Asparagine	synthase
HAD_2	PF13419.1	gi|15922209|ref|NP_377878.1|	-	0.00013	22.1	0.0	0.00018	21.8	0.0	1.2	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
NAS	PF03059.11	gi|15922209|ref|NP_377878.1|	-	0.028	13.5	0.0	0.032	13.4	0.0	1.1	1	0	0	1	1	1	0	Nicotianamine	synthase	protein
GCV_H	PF01597.14	gi|15922210|ref|NP_377879.1|	-	4.7e-30	103.7	1.8	6e-30	103.4	1.2	1.1	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
Biotin_lipoyl	PF00364.17	gi|15922210|ref|NP_377879.1|	-	0.0013	18.2	1.5	0.0032	17.0	0.1	2.1	1	1	1	2	2	2	1	Biotin-requiring	enzyme
DUF3315	PF11776.3	gi|15922210|ref|NP_377879.1|	-	0.03	13.8	0.0	0.054	13.0	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3315)
RNase_H2-Ydr279	PF09468.5	gi|15922210|ref|NP_377879.1|	-	0.066	12.4	0.0	0.084	12.0	0.0	1.1	1	0	0	1	1	1	0	Ydr279p	protein	family	(RNase	H2	complex	component)
NEAT	PF05031.7	gi|15922210|ref|NP_377879.1|	-	0.094	12.7	0.7	0.21	11.6	0.3	1.8	1	1	1	2	2	2	0	Iron	Transport-associated	domain
GCV_H	PF01597.14	gi|15922211|ref|NP_377880.1|	-	1.3e-41	141.0	1.2	1.6e-41	140.8	0.8	1.1	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
Biotin_lipoyl	PF00364.17	gi|15922211|ref|NP_377880.1|	-	2.2e-06	27.1	1.8	4e-06	26.3	1.2	1.4	1	0	0	1	1	1	1	Biotin-requiring	enzyme
RnfC_N	PF13375.1	gi|15922211|ref|NP_377880.1|	-	0.0011	18.6	0.3	0.0018	17.9	0.2	1.4	1	0	0	1	1	1	1	RnfC	Barrel	sandwich	hybrid	domain
Peptidase_M23	PF01551.17	gi|15922211|ref|NP_377880.1|	-	0.071	13.1	0.2	3	7.9	0.1	2.2	1	1	1	2	2	2	0	Peptidase	family	M23
BPL_LplA_LipB	PF03099.14	gi|15922212|ref|NP_377881.1|	-	7.7e-10	38.8	0.1	1.5e-09	37.9	0.0	1.4	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
Lip_prot_lig_C	PF10437.4	gi|15922212|ref|NP_377881.1|	-	0.023	14.3	2.0	0.023	14.3	0.2	1.9	2	0	0	2	2	2	0	Bacterial	lipoate	protein	ligase	C-terminus
KMP11	PF03037.11	gi|15922212|ref|NP_377881.1|	-	1.5	9.4	7.4	2.5	8.7	1.3	3.3	3	1	1	4	4	4	0	Kinetoplastid	membrane	protein	11
CBS	PF00571.23	gi|15922213|ref|NP_377882.1|	-	9.9e-47	156.4	12.5	1.2e-12	47.4	0.3	4.8	4	1	0	4	4	4	4	CBS	domain
Cupin_4	PF08007.7	gi|15922213|ref|NP_377882.1|	-	0.045	12.9	0.0	0.058	12.6	0.0	1.1	1	0	0	1	1	1	0	Cupin	superfamily	protein
EAP30	PF04157.11	gi|15922213|ref|NP_377882.1|	-	0.049	12.7	0.1	0.76	8.8	0.0	2.2	1	1	0	2	2	2	0	EAP30/Vps36	family
gerPA	PF10676.4	gi|15922213|ref|NP_377882.1|	-	0.071	12.9	0.1	0.31	10.9	0.0	2.0	1	1	1	2	2	2	0	Spore	germination	protein	gerPA/gerPF
Trehalose_PPase	PF02358.11	gi|15922214|ref|NP_377883.1|	-	0.08	11.8	0.0	0.11	11.3	0.0	1.2	1	0	0	1	1	1	0	Trehalose-phosphatase
OsmC	PF02566.14	gi|15922215|ref|NP_377884.1|	-	1.5e-19	70.0	0.0	2.4e-19	69.3	0.0	1.3	1	0	0	1	1	1	1	OsmC-like	protein
DUF770	PF05591.7	gi|15922216|ref|NP_377885.1|	-	0.0055	16.2	1.2	0.013	15.0	0.8	1.6	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF770)
Corona_S2	PF01601.11	gi|15922216|ref|NP_377885.1|	-	0.021	12.9	0.6	0.021	12.9	0.4	1.4	1	1	0	1	1	1	0	Coronavirus	S2	glycoprotein
EspA	PF03433.8	gi|15922216|ref|NP_377885.1|	-	0.048	13.1	0.1	0.058	12.8	0.1	1.1	1	0	0	1	1	1	0	EspA-like	secreted	protein
Glu-tRNAGln	PF02686.10	gi|15922216|ref|NP_377885.1|	-	0.081	12.7	3.2	1.2	8.9	0.3	2.7	2	1	1	3	3	3	0	Glu-tRNAGln	amidotransferase	C	subunit
Nramp	PF01566.13	gi|15922217|ref|NP_377886.1|	-	8.9e-43	146.4	25.4	1.3e-42	145.8	17.6	1.2	1	0	0	1	1	1	1	Natural	resistance-associated	macrophage	protein
Peptidase_M28	PF04389.12	gi|15922218|ref|NP_377887.1|	-	2.6e-05	24.0	0.3	0.00014	21.6	0.2	2.1	1	1	0	1	1	1	1	Peptidase	family	M28
Y1_Tnp	PF01797.11	gi|15922219|ref|NP_377888.1|	-	1.1e-43	147.8	0.0	1.3e-43	147.7	0.0	1.0	1	0	0	1	1	1	1	Transposase	IS200	like
OrfB_IS605	PF01385.14	gi|15922221|ref|NP_377890.1|	-	8e-74	247.8	6.8	1.1e-73	247.4	4.7	1.2	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.6	gi|15922221|ref|NP_377890.1|	-	7e-19	67.2	0.0	1.5e-18	66.1	0.0	1.6	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
UPF0081	PF03652.10	gi|15922221|ref|NP_377890.1|	-	0.0036	17.4	0.0	0.0067	16.5	0.0	1.4	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0081)
HTH_23	PF13384.1	gi|15922222|ref|NP_377891.1|	-	4.6e-08	32.4	0.1	1.1e-07	31.2	0.0	1.7	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.1	gi|15922222|ref|NP_377891.1|	-	5.3e-07	29.5	0.1	1.2e-06	28.4	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
Terminase_5	PF06056.7	gi|15922222|ref|NP_377891.1|	-	1.6e-06	27.5	0.0	3.6e-06	26.4	0.0	1.6	1	0	0	1	1	1	1	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_38	PF13936.1	gi|15922222|ref|NP_377891.1|	-	1.2e-05	24.6	0.0	2.1e-05	23.9	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
Zn_Tnp_IS1	PF03811.8	gi|15922222|ref|NP_377891.1|	-	7.6e-05	22.1	9.2	0.00021	20.6	6.4	1.8	1	0	0	1	1	1	1	InsA	N-terminal	domain
DDE_Tnp_IS1	PF03400.8	gi|15922222|ref|NP_377891.1|	-	8.1e-05	22.7	2.1	0.00015	21.8	1.5	1.4	1	0	0	1	1	1	1	IS1	transposase
Sigma70_r4_2	PF08281.7	gi|15922222|ref|NP_377891.1|	-	0.00037	19.8	0.0	0.00071	18.9	0.0	1.4	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_29	PF13551.1	gi|15922222|ref|NP_377891.1|	-	0.001	19.1	0.0	0.0018	18.3	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn	helix
DDE_Tnp_IS66	PF03050.9	gi|15922222|ref|NP_377891.1|	-	0.003	16.8	0.7	0.0039	16.4	0.5	1.1	1	0	0	1	1	1	1	Transposase	IS66	family
HTH_Tnp_1	PF01527.15	gi|15922222|ref|NP_377891.1|	-	0.0041	17.0	0.1	0.01	15.7	0.0	1.7	1	0	0	1	1	1	1	Transposase
HTH_40	PF14493.1	gi|15922222|ref|NP_377891.1|	-	0.0073	16.5	0.0	0.012	15.8	0.0	1.5	1	1	0	1	1	1	1	Helix-turn-helix	domain
HTH_Tnp_ISL3	PF13542.1	gi|15922222|ref|NP_377891.1|	-	0.038	13.1	0.0	0.11	11.7	0.0	1.8	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	transposase	family	ISL3
Zn_Tnp_IS1595	PF12760.2	gi|15922222|ref|NP_377891.1|	-	0.072	12.9	5.7	0.16	11.8	3.9	1.6	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
GerE	PF00196.14	gi|15922222|ref|NP_377891.1|	-	0.1	11.9	0.0	0.19	11.0	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
OrfB_Zn_ribbon	PF07282.6	gi|15922222|ref|NP_377891.1|	-	0.11	12.1	1.5	0.29	10.8	1.1	1.6	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
zinc_ribbon_5	PF13719.1	gi|15922222|ref|NP_377891.1|	-	0.3	10.7	2.7	0.65	9.6	1.6	1.8	2	0	0	2	2	2	0	zinc-ribbon	domain
Lar_restr_allev	PF14354.1	gi|15922222|ref|NP_377891.1|	-	0.72	10.1	3.2	1.2	9.5	0.7	2.2	2	0	0	2	2	2	0	Restriction	alleviation	protein	Lar
Zn-ribbon_8	PF09723.5	gi|15922222|ref|NP_377891.1|	-	0.92	9.5	5.4	3.7	7.5	0.6	2.5	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-Mss51	PF13824.1	gi|15922222|ref|NP_377891.1|	-	1.2	9.0	5.8	3	7.7	4.0	1.7	1	1	0	1	1	1	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
zf-ISL3	PF14690.1	gi|15922222|ref|NP_377891.1|	-	2.1	8.4	10.7	7.7	6.6	2.0	2.8	1	1	2	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Nudix_N_2	PF14803.1	gi|15922222|ref|NP_377891.1|	-	4	7.2	7.9	8.3	6.1	5.5	1.4	1	0	0	1	1	1	0	Nudix	N-terminal
Transposase_20	PF02371.11	gi|15922223|ref|NP_377892.1|	-	9.1e-27	93.0	0.0	1.7e-26	92.1	0.0	1.5	1	0	0	1	1	1	1	Transposase	IS116/IS110/IS902	family
DEDD_Tnp_IS110	PF01548.12	gi|15922223|ref|NP_377892.1|	-	2.7e-19	69.2	0.0	4.8e-19	68.4	0.0	1.4	1	0	0	1	1	1	1	Transposase
PhoH	PF02562.11	gi|15922224|ref|NP_377893.1|	-	3.3e-49	166.8	0.1	4.5e-49	166.4	0.1	1.2	1	0	0	1	1	1	1	PhoH-like	protein
KH_5	PF13184.1	gi|15922224|ref|NP_377893.1|	-	2.3e-10	40.1	3.0	3.4e-08	33.1	0.1	3.1	2	0	0	2	2	2	1	NusA-like	KH	domain
KH_2	PF07650.12	gi|15922224|ref|NP_377893.1|	-	1.8e-09	37.0	5.3	9.9e-09	34.6	1.5	2.6	1	1	1	2	2	2	1	KH	domain
AAA_22	PF13401.1	gi|15922224|ref|NP_377893.1|	-	2.7e-05	24.3	0.0	6.1e-05	23.1	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
DEAD	PF00270.24	gi|15922224|ref|NP_377893.1|	-	0.00035	20.1	0.0	0.00059	19.3	0.0	1.5	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
IstB_IS21	PF01695.12	gi|15922224|ref|NP_377893.1|	-	0.00059	19.2	0.0	0.0011	18.4	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
Arch_ATPase	PF01637.13	gi|15922224|ref|NP_377893.1|	-	0.0039	16.9	0.7	0.0082	15.8	0.5	1.6	1	1	0	1	1	1	1	Archaeal	ATPase
AAA_14	PF13173.1	gi|15922224|ref|NP_377893.1|	-	0.017	15.0	2.9	0.31	10.9	1.0	2.9	2	1	0	2	2	2	0	AAA	domain
ResIII	PF04851.10	gi|15922224|ref|NP_377893.1|	-	0.019	14.7	0.1	0.034	13.9	0.1	1.6	1	1	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
AAA_25	PF13481.1	gi|15922224|ref|NP_377893.1|	-	0.02	14.2	0.0	0.049	13.0	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_30	PF13604.1	gi|15922224|ref|NP_377893.1|	-	0.024	14.1	0.0	0.17	11.4	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
NB-ARC	PF00931.17	gi|15922224|ref|NP_377893.1|	-	0.096	11.5	0.1	0.22	10.3	0.0	1.6	2	0	0	2	2	2	0	NB-ARC	domain
DUF2075	PF09848.4	gi|15922224|ref|NP_377893.1|	-	0.2	10.5	0.7	1.3	7.9	0.5	2.1	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
KH_1	PF00013.24	gi|15922224|ref|NP_377893.1|	-	0.27	10.9	6.6	0.27	10.8	1.5	2.8	2	1	0	2	2	2	0	KH	domain
KH_3	PF13014.1	gi|15922224|ref|NP_377893.1|	-	0.34	10.6	3.1	2.3	7.9	1.0	2.8	2	0	0	2	2	2	0	KH	domain
AAA	PF00004.24	gi|15922224|ref|NP_377893.1|	-	1.2	9.3	6.0	28	4.9	4.2	2.5	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Exo_endo_phos	PF03372.18	gi|15922225|ref|NP_377894.1|	-	7.8e-18	65.2	0.0	9.1e-18	65.0	0.0	1.0	1	0	0	1	1	1	1	Endonuclease/Exonuclease/phosphatase	family
Exo_endo_phos_2	PF14529.1	gi|15922225|ref|NP_377894.1|	-	9.3e-16	57.5	0.0	1.3e-15	57.0	0.0	1.2	1	0	0	1	1	1	1	Endonuclease-reverse	transcriptase
DUF95	PF01944.12	gi|15922226|ref|NP_377895.1|	-	9.6e-17	61.1	20.4	9.6e-17	61.1	14.2	2.2	2	1	0	2	2	2	1	Integral	membrane	protein	DUF95
Helicase_RecD	PF05127.9	gi|15922227|ref|NP_377896.1|	-	1.3e-44	151.9	0.0	2e-44	151.2	0.0	1.3	1	0	0	1	1	1	1	Helicase
GNAT_acetyltr_2	PF13718.1	gi|15922227|ref|NP_377896.1|	-	3.6e-38	130.8	0.0	3.4e-37	127.6	0.0	2.1	1	1	0	1	1	1	1	GNAT	acetyltransferase	2
DUF1726	PF08351.6	gi|15922227|ref|NP_377896.1|	-	3.3e-22	77.9	0.0	3.4e-21	74.7	0.0	2.3	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1726)
tRNA_bind_2	PF13725.1	gi|15922227|ref|NP_377896.1|	-	3.4e-10	39.9	0.0	8.4e-10	38.6	0.0	1.7	1	0	0	1	1	1	1	Possible	tRNA	binding	domain
AAA_22	PF13401.1	gi|15922227|ref|NP_377896.1|	-	2e-07	31.1	0.0	4.4e-06	26.8	0.0	2.6	1	1	1	2	2	2	1	AAA	domain
Acetyltransf_1	PF00583.19	gi|15922227|ref|NP_377896.1|	-	2.9e-06	27.2	0.0	2.5e-05	24.2	0.0	2.4	3	0	0	3	3	3	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|15922227|ref|NP_377896.1|	-	7.4e-06	26.0	0.0	3.5e-05	23.8	0.0	2.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
DUF2469	PF10611.4	gi|15922227|ref|NP_377896.1|	-	0.0093	16.3	0.1	0.036	14.4	0.1	2.1	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2469)
NPCBM_assoc	PF10633.4	gi|15922228|ref|NP_377897.1|	-	1.2e-16	60.5	8.8	0.00052	19.9	0.0	7.5	6	2	1	7	7	7	4	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
CARDB	PF07705.6	gi|15922228|ref|NP_377897.1|	-	8e-08	32.2	27.4	0.00085	19.3	1.7	5.7	4	1	2	6	6	6	4	CARDB
TRAP_beta	PF05753.9	gi|15922228|ref|NP_377897.1|	-	0.00021	20.4	20.7	0.93	8.6	0.0	6.4	5	1	0	5	5	5	2	Translocon-associated	protein	beta	(TRAPB)
Rifin_STEVOR	PF02009.11	gi|15922228|ref|NP_377897.1|	-	0.016	14.8	1.2	0.023	14.3	0.8	1.2	1	0	0	1	1	1	0	Rifin/stevor	family
RAMP	PF04901.8	gi|15922228|ref|NP_377897.1|	-	0.9	9.3	7.1	0.5	10.1	0.5	3.1	3	0	0	3	3	3	0	Receptor	activity	modifying	family
DUF11	PF01345.13	gi|15922228|ref|NP_377897.1|	-	3.5	7.7	22.3	0.095	12.7	0.3	5.6	5	1	1	6	6	6	0	Domain	of	unknown	function	DUF11
MMPL	PF03176.10	gi|15922229|ref|NP_377898.1|	-	2.4e-51	174.4	34.0	1.8e-28	99.2	6.2	2.8	2	1	1	3	3	3	2	MMPL	family
POTRA_2	PF08479.6	gi|15922229|ref|NP_377898.1|	-	0.027	14.1	0.5	1.3	8.7	0.1	3.2	2	1	1	3	3	3	0	POTRA	domain,	ShlB-type
SBP_bac_1	PF01547.20	gi|15922230|ref|NP_377899.1|	-	1.1e-06	28.6	0.1	1.4e-06	28.2	0.1	1.2	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
Glyco_tranf_2_4	PF13704.1	gi|15922230|ref|NP_377899.1|	-	0.054	13.8	0.0	0.14	12.5	0.0	1.7	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
DUF772	PF05598.6	gi|15922231|ref|NP_377900.1|	-	1.7e-05	24.5	0.1	4.4e-05	23.3	0.1	1.7	1	1	0	1	1	1	1	Transposase	domain	(DUF772)
DDE_Tnp_1	PF01609.16	gi|15922231|ref|NP_377900.1|	-	0.049	13.1	0.0	1.7	8.1	0.0	2.3	1	1	1	2	2	2	0	Transposase	DDE	domain
ABC_tran	PF00005.22	gi|15922232|ref|NP_377901.1|	-	4.5e-20	72.3	0.0	7.6e-20	71.6	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|15922232|ref|NP_377901.1|	-	1.1e-07	32.0	0.2	4e-07	30.3	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
AAA_15	PF13175.1	gi|15922232|ref|NP_377901.1|	-	1.2e-06	27.9	0.6	2.8e-06	26.6	0.4	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
TOBE_2	PF08402.5	gi|15922232|ref|NP_377901.1|	-	6.9e-06	25.9	0.0	1.5e-05	24.9	0.0	1.6	1	0	0	1	1	1	1	TOBE	domain
SbcCD_C	PF13558.1	gi|15922232|ref|NP_377901.1|	-	0.16	11.9	0.2	1.9	8.4	0.0	2.5	2	1	0	2	2	2	0	Putative	exonuclease	SbcCD,	C	subunit
BPD_transp_1	PF00528.17	gi|15922233|ref|NP_377902.1|	-	1.4e-14	54.0	76.1	2.4e-09	36.9	11.9	4.1	2	2	1	3	3	3	2	Binding-protein-dependent	transport	system	inner	membrane	component
AAA_14	PF13173.1	gi|15922234|ref|NP_377903.1|	-	5.5e-29	100.6	0.0	1.8e-28	98.9	0.0	1.9	1	0	0	1	1	1	1	AAA	domain
DUF4143	PF13635.1	gi|15922234|ref|NP_377903.1|	-	4.3e-11	42.8	0.3	8.1e-11	41.9	0.2	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
Arch_ATPase	PF01637.13	gi|15922234|ref|NP_377903.1|	-	0.0024	17.6	6.8	0.44	10.2	0.0	3.7	3	1	1	4	4	4	2	Archaeal	ATPase
HTH_17	PF12728.2	gi|15922234|ref|NP_377903.1|	-	0.0041	17.3	0.2	0.087	13.0	0.0	3.0	3	0	0	3	3	3	1	Helix-turn-helix	domain
HTH_28	PF13518.1	gi|15922234|ref|NP_377903.1|	-	0.0085	16.0	0.1	0.02	14.8	0.1	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_29	PF13551.1	gi|15922234|ref|NP_377903.1|	-	0.02	15.0	0.0	0.042	13.9	0.0	1.5	1	0	0	1	1	1	0	Winged	helix-turn	helix
AAA_17	PF13207.1	gi|15922234|ref|NP_377903.1|	-	0.022	15.5	0.1	0.059	14.1	0.1	2.3	1	1	0	1	1	1	0	AAA	domain
HTH_DeoR	PF08220.7	gi|15922234|ref|NP_377903.1|	-	0.023	14.2	0.2	0.07	12.6	0.0	1.9	2	0	0	2	2	2	0	DeoR-like	helix-turn-helix	domain
DUF746	PF05344.6	gi|15922234|ref|NP_377903.1|	-	0.093	12.2	0.0	0.17	11.4	0.0	1.4	1	0	0	1	1	1	0	Domain	of	Unknown	Function	(DUF746)
HTH_Crp_2	PF13545.1	gi|15922234|ref|NP_377903.1|	-	0.094	12.5	0.1	0.48	10.2	0.0	2.3	2	0	0	2	2	2	0	Crp-like	helix-turn-helix	domain
HTH_23	PF13384.1	gi|15922234|ref|NP_377903.1|	-	0.12	12.0	0.1	0.32	10.7	0.0	1.7	1	0	0	1	1	1	0	Homeodomain-like	domain
AAA_18	PF13238.1	gi|15922234|ref|NP_377903.1|	-	0.18	12.1	1.9	2.4	8.4	0.0	2.8	3	1	1	4	4	3	0	AAA	domain
HTH_25	PF13413.1	gi|15922234|ref|NP_377903.1|	-	1.4	8.6	4.0	5.5	6.7	0.3	2.8	2	1	0	2	2	2	0	Helix-turn-helix	domain
CcdA	PF07362.7	gi|15922235|ref|NP_377904.1|	-	1.6e-05	24.6	5.1	4.2e-05	23.3	3.5	1.8	1	1	0	1	1	1	1	Post-segregation	antitoxin	CcdA
RHH_1	PF01402.16	gi|15922235|ref|NP_377904.1|	-	0.019	14.8	0.2	0.019	14.8	0.1	2.3	3	0	0	3	3	3	0	Ribbon-helix-helix	protein,	copG	family
DUF2433	PF10360.4	gi|15922235|ref|NP_377904.1|	-	0.14	12.4	0.2	0.17	12.2	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2433)
PSK_trans_fac	PF07704.6	gi|15922235|ref|NP_377904.1|	-	0.3	11.8	2.5	0.44	11.2	1.8	1.4	1	1	0	1	1	1	0	Rv0623-like	transcription	factor
Apolipoprotein	PF01442.13	gi|15922236|ref|NP_377905.1|	-	1e-07	31.7	16.7	2.7e-07	30.3	11.7	1.6	1	1	0	1	1	1	1	Apolipoprotein	A1/A4/E	domain
DUF4375	PF14300.1	gi|15922236|ref|NP_377905.1|	-	0.0095	15.9	4.4	0.0095	15.9	3.0	3.8	2	1	0	3	3	3	1	Domain	of	unknown	function	(DUF4375)
DUF4143	PF13635.1	gi|15922236|ref|NP_377905.1|	-	0.019	15.1	14.0	0.035	14.2	9.5	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4143)
Glycos_trans_3N	PF02885.12	gi|15922236|ref|NP_377905.1|	-	0.035	13.6	0.1	0.083	12.4	0.1	1.6	1	0	0	1	1	1	0	Glycosyl	transferase	family,	helical	bundle	domain
Gp58	PF07902.6	gi|15922236|ref|NP_377905.1|	-	0.043	12.0	13.2	0.11	10.7	1.5	2.3	1	1	1	2	2	2	0	gp58-like	protein
DUF3725	PF12523.3	gi|15922236|ref|NP_377905.1|	-	0.045	13.8	11.6	1.6	8.8	0.2	4.7	1	1	4	5	5	5	0	Protein	of	unknown	function	(DUF3725)
NERD	PF08378.6	gi|15922236|ref|NP_377905.1|	-	0.045	14.0	3.2	0.046	13.9	0.2	2.4	1	1	1	2	2	2	0	Nuclease-related	domain
AAA_21	PF13304.1	gi|15922236|ref|NP_377905.1|	-	0.34	10.8	15.8	0.43	10.5	10.9	1.3	1	0	0	1	1	1	0	AAA	domain
Toxin_trans	PF07952.7	gi|15922236|ref|NP_377905.1|	-	0.44	9.3	20.0	3.1	6.6	2.8	3.3	1	1	2	3	3	3	0	Clostridium	neurotoxin,	Translocation	domain
FliT	PF05400.8	gi|15922236|ref|NP_377905.1|	-	0.78	10.1	21.1	1.6	9.1	2.1	4.1	1	1	2	3	3	3	0	Flagellar	protein	FliT
Fmp27_SW	PF10305.4	gi|15922236|ref|NP_377905.1|	-	1.8	9.0	6.1	0.44	11.0	0.3	2.7	1	1	2	3	3	3	0	RNA	pol	II	promoter	Fmp27	protein	domain
Prominin	PF05478.6	gi|15922236|ref|NP_377905.1|	-	4.3	4.7	10.7	8.1	3.8	1.4	2.5	1	1	2	3	3	3	0	Prominin
YfcL	PF08891.6	gi|15922236|ref|NP_377905.1|	-	8	6.5	12.3	7.3	6.6	0.2	4.0	1	1	3	4	4	4	0	YfcL	protein
PMC2NT	PF08066.7	gi|15922236|ref|NP_377905.1|	-	8.6	6.7	9.8	7.7	6.8	1.6	3.1	2	1	1	3	3	3	0	PMC2NT	(NUC016)	domain
AAA_21	PF13304.1	gi|15922237|ref|NP_377906.1|	-	9.2e-23	81.6	7.3	9.2e-23	81.6	5.0	2.9	2	1	0	2	2	2	1	AAA	domain
AAA_23	PF13476.1	gi|15922237|ref|NP_377906.1|	-	1.7e-10	41.5	1.8	1.7e-10	41.5	1.3	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_15	PF13175.1	gi|15922237|ref|NP_377906.1|	-	3.9e-10	39.3	16.4	4.8e-09	35.7	0.4	3.3	2	1	1	3	3	3	2	AAA	ATPase	domain
DUF2813	PF11398.3	gi|15922237|ref|NP_377906.1|	-	2.2e-07	30.3	0.1	1.3e-05	24.5	0.0	2.2	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2813)
SMC_N	PF02463.14	gi|15922237|ref|NP_377906.1|	-	5.3e-07	29.0	0.2	8.6e-05	21.8	0.0	2.6	3	0	0	3	3	3	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|15922237|ref|NP_377906.1|	-	0.00011	21.6	0.0	0.00032	20.1	0.0	1.8	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
ABC_tran	PF00005.22	gi|15922237|ref|NP_377906.1|	-	0.0049	17.1	0.0	0.012	15.9	0.0	1.6	1	0	0	1	1	1	1	ABC	transporter
SpoVAE	PF14097.1	gi|15922237|ref|NP_377906.1|	-	0.011	15.1	0.4	0.15	11.4	0.1	2.3	2	0	0	2	2	2	0	Stage	V	sporulation	protein	AE1
AAA_13	PF13166.1	gi|15922237|ref|NP_377906.1|	-	0.026	12.9	2.2	0.13	10.6	0.1	2.4	3	0	0	3	3	3	0	AAA	domain
MMR_HSR1	PF01926.18	gi|15922237|ref|NP_377906.1|	-	0.03	14.2	0.3	0.38	10.7	0.1	2.6	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
Gtr1_RagA	PF04670.7	gi|15922238|ref|NP_377907.1|	-	0.01	14.9	1.2	0.29	10.2	0.1	2.5	1	1	0	2	2	2	0	Gtr1/RagA	G	protein	conserved	region
Rick_17kDa_Anti	PF05433.10	gi|15922239|ref|NP_377908.1|	-	0.002	17.7	0.5	0.0033	17.0	0.4	1.4	1	0	0	1	1	1	1	Glycine	zipper	2TM	domain
DsbD_2	PF13386.1	gi|15922239|ref|NP_377908.1|	-	0.083	12.6	0.1	0.11	12.2	0.1	1.1	1	0	0	1	1	1	0	Cytochrome	C	biogenesis	protein	transmembrane	region
Stathmin	PF00836.14	gi|15922240|ref|NP_377909.1|	-	0.066	12.8	0.8	0.13	11.9	0.5	1.5	1	0	0	1	1	1	0	Stathmin	family
Ank_2	PF12796.2	gi|15922240|ref|NP_377909.1|	-	0.094	13.0	0.0	0.17	12.2	0.0	1.6	1	0	0	1	1	1	0	Ankyrin	repeats	(3	copies)
Glycos_transf_1	PF00534.15	gi|15922241|ref|NP_377910.1|	-	6.3e-16	58.2	0.2	1.9e-15	56.7	0.0	1.7	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|15922241|ref|NP_377910.1|	-	3.2e-09	37.0	0.0	5.6e-09	36.2	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|15922241|ref|NP_377910.1|	-	7e-08	32.6	0.0	2.2e-07	31.0	0.0	1.7	1	1	1	2	2	2	1	Glycosyl	transferases	group	1
DDE_Tnp_2	PF04693.7	gi|15922244|ref|NP_377913.1|	-	6.7e-30	104.2	0.5	7.9e-30	103.9	0.3	1.1	1	0	0	1	1	1	1	Archaeal	putative	transposase	ISC1217
DDE_Tnp_1	PF01609.16	gi|15922244|ref|NP_377913.1|	-	5e-06	26.2	0.1	6.8e-06	25.7	0.1	1.2	1	0	0	1	1	1	1	Transposase	DDE	domain
Coq4	PF05019.8	gi|15922246|ref|NP_377915.1|	-	0.074	11.9	0.2	0.076	11.9	0.1	1.1	1	0	0	1	1	1	0	Coenzyme	Q	(ubiquinone)	biosynthesis	protein	Coq4
TraT	PF05818.7	gi|15922247|ref|NP_377916.1|	-	0.12	11.8	0.0	0.16	11.4	0.0	1.1	1	0	0	1	1	1	0	Enterobacterial	TraT	complement	resistance	protein
PIN	PF01850.16	gi|15922248|ref|NP_377917.1|	-	1.5e-05	25.2	0.9	2.3e-05	24.7	0.6	1.3	1	0	0	1	1	1	1	PIN	domain
Streptin-Immun	PF11083.3	gi|15922248|ref|NP_377917.1|	-	0.05	13.5	0.2	0.083	12.8	0.2	1.4	1	0	0	1	1	1	0	Lantibiotic	streptin	immunity	protein
PIN	PF01850.16	gi|15922249|ref|NP_377918.1|	-	1.9e-07	31.4	1.0	3e-07	30.7	0.7	1.3	1	1	0	1	1	1	1	PIN	domain
PIN_3	PF13470.1	gi|15922249|ref|NP_377918.1|	-	0.08	13.6	0.1	0.12	13.0	0.1	1.4	1	1	0	1	1	1	0	PIN	domain
PIN_4	PF13638.1	gi|15922249|ref|NP_377918.1|	-	0.18	11.8	1.5	0.27	11.3	1.0	1.4	1	1	0	1	1	1	0	PIN	domain
DUF3920	PF13058.1	gi|15922253|ref|NP_377922.1|	-	0.044	13.5	1.2	0.065	13.0	0.9	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3920)
MCM_N	PF14551.1	gi|15922253|ref|NP_377922.1|	-	0.17	12.4	1.2	2.1	8.8	0.1	2.1	1	1	1	2	2	2	0	MCM	N-terminal	domain
Resolvase	PF00239.16	gi|15922255|ref|NP_377924.1|	-	1.2e-20	73.8	0.5	1.5e-20	73.5	0.3	1.1	1	0	0	1	1	1	1	Resolvase,	N	terminal	domain
HTH_17	PF12728.2	gi|15922255|ref|NP_377924.1|	-	3.4e-13	49.6	0.1	3.4e-13	49.6	0.1	2.8	4	0	0	4	4	4	1	Helix-turn-helix	domain
DUF1323	PF07037.6	gi|15922255|ref|NP_377924.1|	-	0.00072	19.7	0.2	0.0023	18.0	0.1	2.0	1	1	0	1	1	1	1	Putative	transcription	regulator	(DUF1323)
MerR_1	PF13411.1	gi|15922255|ref|NP_377924.1|	-	0.0021	17.8	0.2	0.0062	16.2	0.0	1.9	2	1	0	2	2	2	1	MerR	HTH	family	regulatory	protein
MerR	PF00376.18	gi|15922255|ref|NP_377924.1|	-	0.0025	17.3	0.0	0.0053	16.2	0.0	1.6	1	0	0	1	1	1	1	MerR	family	regulatory	protein
HTH_28	PF13518.1	gi|15922255|ref|NP_377924.1|	-	0.0083	16.1	2.3	0.082	12.9	0.1	3.0	3	0	0	3	3	3	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|15922255|ref|NP_377924.1|	-	0.011	15.3	0.1	0.18	11.5	0.0	2.6	2	0	0	2	2	2	0	Homeodomain-like	domain
TFIID_20kDa	PF03847.8	gi|15922255|ref|NP_377924.1|	-	0.014	15.6	0.3	0.036	14.3	0.1	1.8	2	0	0	2	2	1	0	Transcription	initiation	factor	TFIID	subunit	A
Clp1	PF06807.9	gi|15922255|ref|NP_377924.1|	-	0.015	15.0	0.3	0.058	13.1	0.0	2.0	1	1	2	3	3	3	0	Pre-mRNA	cleavage	complex	II	protein	Clp1
NYN	PF01936.13	gi|15922255|ref|NP_377924.1|	-	0.032	14.5	0.1	0.054	13.7	0.1	1.3	1	0	0	1	1	1	0	NYN	domain
HTH_37	PF13744.1	gi|15922255|ref|NP_377924.1|	-	0.034	13.9	0.0	1.4	8.7	0.0	2.5	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_3	PF01381.17	gi|15922255|ref|NP_377924.1|	-	0.086	12.7	0.0	0.52	10.1	0.0	2.3	2	0	0	2	2	2	0	Helix-turn-helix
B12-binding	PF02310.14	gi|15922255|ref|NP_377924.1|	-	0.12	12.2	0.0	0.24	11.2	0.0	1.5	1	1	0	1	1	1	0	B12	binding	domain
DUF4276	PF14103.1	gi|15922256|ref|NP_377925.1|	-	0.00042	20.2	0.5	0.00075	19.4	0.3	1.4	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4276)
GshA	PF08886.6	gi|15922256|ref|NP_377925.1|	-	0.012	13.9	0.1	0.016	13.5	0.0	1.1	1	0	0	1	1	1	0	Glutamate-cysteine	ligase
KH_5	PF13184.1	gi|15922256|ref|NP_377925.1|	-	0.54	10.0	5.8	9.8	6.0	3.4	2.7	2	1	0	2	2	2	0	NusA-like	KH	domain
AAA_21	PF13304.1	gi|15922257|ref|NP_377926.1|	-	1.5e-29	103.8	2.2	2.5e-29	103.1	1.5	1.4	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|15922257|ref|NP_377926.1|	-	3.3e-14	52.6	0.1	3.7e-09	36.1	0.1	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|15922257|ref|NP_377926.1|	-	2.5e-10	41.0	0.1	5e-10	40.0	0.0	1.5	2	0	0	2	2	2	1	AAA	domain
AAA_15	PF13175.1	gi|15922257|ref|NP_377926.1|	-	6.3e-09	35.3	2.3	0.00071	18.7	0.0	2.3	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_29	PF13555.1	gi|15922257|ref|NP_377926.1|	-	4.7e-05	22.8	0.0	0.00011	21.6	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
DUF2813	PF11398.3	gi|15922257|ref|NP_377926.1|	-	0.00046	19.3	0.5	0.42	9.6	0.1	2.1	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF2813)
ABC_tran	PF00005.22	gi|15922257|ref|NP_377926.1|	-	0.0047	17.2	0.0	0.061	13.6	0.0	2.2	2	0	0	2	2	2	1	ABC	transporter
AAA_22	PF13401.1	gi|15922257|ref|NP_377926.1|	-	0.0097	16.0	0.0	0.87	9.7	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
DUF258	PF03193.11	gi|15922257|ref|NP_377926.1|	-	0.077	12.1	0.0	0.14	11.3	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_13	PF13166.1	gi|15922257|ref|NP_377926.1|	-	0.12	10.7	0.0	0.21	9.9	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
DUF4322	PF14210.1	gi|15922258|ref|NP_377927.1|	-	3.2e-36	122.5	0.2	7.9e-36	121.3	0.0	1.8	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4322)
DDE_Tnp_1	PF01609.16	gi|15922258|ref|NP_377927.1|	-	0.00028	20.4	0.3	0.00041	19.9	0.2	1.2	1	0	0	1	1	1	1	Transposase	DDE	domain
FolB	PF02152.13	gi|15922258|ref|NP_377927.1|	-	0.074	13.2	0.2	0.53	10.4	0.0	2.1	2	0	0	2	2	2	0	Dihydroneopterin	aldolase
DDE_5	PF13546.1	gi|15922258|ref|NP_377927.1|	-	0.11	11.3	0.0	0.21	10.3	0.0	1.4	1	0	0	1	1	1	0	DDE	superfamily	endonuclease
DUF217	PF02697.9	gi|15922259|ref|NP_377928.1|	-	3e-25	88.2	1.9	3.4e-25	88.0	1.3	1.0	1	0	0	1	1	1	1	Uncharacterized	ACR,	COG1753
SeqA	PF03925.8	gi|15922259|ref|NP_377928.1|	-	0.00065	19.4	0.1	0.0007	19.3	0.0	1.1	1	0	0	1	1	1	1	SeqA	protein
Lipoprotein_11	PF03260.8	gi|15922259|ref|NP_377928.1|	-	0.014	14.4	0.1	0.015	14.3	0.1	1.1	1	0	0	1	1	1	0	Lepidopteran	low	molecular	weight	(30	kD)	lipoprotein
PIN	PF01850.16	gi|15922260|ref|NP_377929.1|	-	8e-16	58.4	0.1	8.8e-16	58.3	0.1	1.0	1	0	0	1	1	1	1	PIN	domain
HTH_17	PF12728.2	gi|15922261|ref|NP_377930.1|	-	4.1e-14	52.5	0.1	9.4e-14	51.3	0.0	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
Peptidase_M48	PF01435.13	gi|15922261|ref|NP_377930.1|	-	5.3e-07	29.4	0.1	8.9e-07	28.7	0.1	1.3	1	0	0	1	1	1	1	Peptidase	family	M48
MerR_1	PF13411.1	gi|15922261|ref|NP_377930.1|	-	7.5e-05	22.4	0.0	0.00027	20.6	0.0	2.1	1	1	0	1	1	1	1	MerR	HTH	family	regulatory	protein
MerR	PF00376.18	gi|15922261|ref|NP_377930.1|	-	0.00026	20.4	0.0	0.0005	19.5	0.0	1.5	1	0	0	1	1	1	1	MerR	family	regulatory	protein
HTH_23	PF13384.1	gi|15922261|ref|NP_377930.1|	-	0.00028	20.4	0.0	0.00074	19.0	0.0	1.7	1	0	0	1	1	1	1	Homeodomain-like	domain
Peptidase_U49	PF10463.4	gi|15922261|ref|NP_377930.1|	-	0.00042	20.1	7.3	0.39	10.4	0.2	3.2	3	0	0	3	3	3	2	Peptidase	U49
HTH_28	PF13518.1	gi|15922261|ref|NP_377930.1|	-	0.0018	18.2	0.0	0.0073	16.2	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
Mt_ATP-synt_D	PF05873.7	gi|15922261|ref|NP_377930.1|	-	0.0037	16.9	1.1	0.0058	16.2	0.4	1.5	2	0	0	2	2	2	1	ATP	synthase	D	chain,	mitochondrial	(ATP5H)
HTH_29	PF13551.1	gi|15922261|ref|NP_377930.1|	-	0.017	15.3	0.0	0.035	14.2	0.0	1.5	1	0	0	1	1	1	0	Winged	helix-turn	helix
DUF955	PF06114.8	gi|15922261|ref|NP_377930.1|	-	0.017	14.8	4.3	0.029	14.0	0.6	2.9	2	2	0	2	2	2	0	Domain	of	unknown	function	(DUF955)
DUF45	PF01863.12	gi|15922261|ref|NP_377930.1|	-	0.028	14.1	1.2	0.1	12.3	0.9	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	DUF45
CAT	PF00302.13	gi|15922261|ref|NP_377930.1|	-	0.077	12.6	0.6	6.9	6.2	0.0	2.1	2	0	0	2	2	2	0	Chloramphenicol	acetyltransferase
Peptidase_M56	PF05569.6	gi|15922261|ref|NP_377930.1|	-	0.099	11.5	0.1	0.21	10.5	0.1	1.5	1	0	0	1	1	1	0	BlaR1	peptidase	M56
MGS	PF02142.17	gi|15922261|ref|NP_377930.1|	-	0.12	12.2	0.2	2.3	8.2	0.1	2.3	2	0	0	2	2	2	0	MGS-like	domain
HTH_3	PF01381.17	gi|15922261|ref|NP_377930.1|	-	0.17	11.7	1.1	0.66	9.8	0.0	2.6	3	0	0	3	3	3	0	Helix-turn-helix
Piwi	PF02171.12	gi|15922263|ref|NP_377932.1|	-	2.4e-08	33.3	0.9	4.8e-08	32.3	0.6	1.4	1	0	0	1	1	1	1	Piwi	domain
DUF1395	PF07160.7	gi|15922263|ref|NP_377932.1|	-	0.067	12.6	0.5	0.13	11.7	0.4	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1395)
HALZ	PF02183.13	gi|15922264|ref|NP_377933.1|	-	0.00021	20.9	2.8	0.00056	19.5	1.9	1.7	1	0	0	1	1	1	1	Homeobox	associated	leucine	zipper
BLOC1_2	PF10046.4	gi|15922264|ref|NP_377933.1|	-	0.00089	19.3	0.7	0.00089	19.3	0.5	2.5	3	0	0	3	3	2	1	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
DUF4201	PF13870.1	gi|15922264|ref|NP_377933.1|	-	0.0028	17.1	0.4	0.0028	17.1	0.3	1.9	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4201)
DivIC	PF04977.10	gi|15922264|ref|NP_377933.1|	-	0.0032	16.9	1.8	0.0032	16.9	1.2	2.3	3	0	0	3	3	3	1	Septum	formation	initiator
APG6	PF04111.7	gi|15922264|ref|NP_377933.1|	-	0.005	15.9	0.1	0.005	15.9	0.0	1.6	2	0	0	2	2	2	1	Autophagy	protein	Apg6
Baculo_PEP_C	PF04513.7	gi|15922264|ref|NP_377933.1|	-	0.0069	16.2	0.7	0.018	14.8	0.5	1.6	1	0	0	1	1	1	1	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
TMF_DNA_bd	PF12329.3	gi|15922264|ref|NP_377933.1|	-	0.007	16.1	1.3	0.007	16.1	0.9	2.2	2	0	0	2	2	2	1	TATA	element	modulatory	factor	1	DNA	binding
Seryl_tRNA_N	PF02403.17	gi|15922264|ref|NP_377933.1|	-	0.009	16.0	2.8	0.0096	15.9	0.2	2.2	2	0	0	2	2	2	1	Seryl-tRNA	synthetase	N-terminal	domain
Prefoldin	PF02996.12	gi|15922264|ref|NP_377933.1|	-	0.013	15.1	2.9	0.019	14.6	0.6	2.3	2	0	0	2	2	2	0	Prefoldin	subunit
DivIVA	PF05103.8	gi|15922264|ref|NP_377933.1|	-	0.024	14.6	1.9	0.024	14.6	1.3	2.1	2	0	0	2	2	1	0	DivIVA	protein
DUF4200	PF13863.1	gi|15922264|ref|NP_377933.1|	-	0.024	14.5	0.6	0.024	14.5	0.4	2.9	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF4200)
Syntaxin	PF00804.20	gi|15922264|ref|NP_377933.1|	-	0.031	14.4	0.3	0.086	13.0	0.2	1.8	1	0	0	1	1	1	0	Syntaxin
Uso1_p115_C	PF04871.8	gi|15922264|ref|NP_377933.1|	-	0.032	14.1	1.1	0.069	13.0	0.8	1.5	1	0	0	1	1	1	0	Uso1	/	p115	like	vesicle	tethering	protein,	C	terminal	region
Snapin_Pallidin	PF14712.1	gi|15922264|ref|NP_377933.1|	-	0.034	14.4	0.8	0.12	12.7	0.6	1.9	1	0	0	1	1	1	0	Snapin/Pallidin
TelA	PF05816.6	gi|15922264|ref|NP_377933.1|	-	0.039	12.6	1.4	0.049	12.3	0.4	1.6	2	0	0	2	2	2	0	Toxic	anion	resistance	protein	(TelA)
DUF4423	PF14394.1	gi|15922264|ref|NP_377933.1|	-	0.039	13.4	0.7	0.29	10.6	0.2	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4423)
NPV_P10	PF05531.7	gi|15922264|ref|NP_377933.1|	-	0.044	14.0	1.3	0.12	12.6	0.8	1.8	1	1	0	1	1	1	0	Nucleopolyhedrovirus	P10	protein
SGL	PF08450.7	gi|15922264|ref|NP_377933.1|	-	0.048	13.0	0.0	0.088	12.1	0.0	1.4	1	0	0	1	1	1	0	SMP-30/Gluconolaconase/LRE-like	region
Kinesin-related	PF06548.6	gi|15922264|ref|NP_377933.1|	-	0.051	12.1	0.5	0.093	11.2	0.4	1.4	1	0	0	1	1	1	0	Kinesin-related
TMEMspv1-c74-12	PF11044.3	gi|15922264|ref|NP_377933.1|	-	0.054	13.0	3.0	0.19	11.3	2.1	2.0	1	0	0	1	1	1	0	Plectrovirus	spv1-c74	ORF	12	transmembrane	protein
DASH_Dad3	PF08656.5	gi|15922264|ref|NP_377933.1|	-	0.058	13.0	1.6	0.15	11.7	0.5	2.1	2	0	0	2	2	2	0	DASH	complex	subunit	Dad3
Fib_alpha	PF08702.5	gi|15922264|ref|NP_377933.1|	-	0.058	13.5	0.1	0.058	13.5	0.1	2.4	3	0	0	3	3	3	0	Fibrinogen	alpha/beta	chain	family
DUF1640	PF07798.6	gi|15922264|ref|NP_377933.1|	-	0.069	13.1	3.9	0.069	13.1	1.9	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1640)
Prefoldin_2	PF01920.15	gi|15922264|ref|NP_377933.1|	-	0.34	10.6	6.8	0.12	12.1	0.4	2.6	2	0	0	2	2	2	0	Prefoldin	subunit
Pox_A_type_inc	PF04508.7	gi|15922264|ref|NP_377933.1|	-	1.5	8.8	4.6	0.85	9.5	1.0	2.4	2	0	0	2	2	1	0	Viral	A-type	inclusion	protein	repeat
HalX	PF08663.5	gi|15922264|ref|NP_377933.1|	-	2.7	8.0	5.8	0.55	10.2	0.1	2.6	3	0	0	3	3	2	0	HalX	domain
Orthopox_A5L	PF06193.6	gi|15922264|ref|NP_377933.1|	-	3.3	7.6	9.8	1.1	9.1	2.4	2.7	2	1	0	2	2	2	0	Orthopoxvirus	A5L	protein-like
TSC22	PF01166.13	gi|15922264|ref|NP_377933.1|	-	3.4	7.6	5.9	0.59	10.1	0.1	2.6	3	0	0	3	3	2	0	TSC-22/dip/bun	family
DDE_Tnp_2	PF04693.7	gi|15922266|ref|NP_377935.1|	-	6.8e-54	183.0	0.2	8.4e-54	182.7	0.1	1.1	1	0	0	1	1	1	1	Archaeal	putative	transposase	ISC1217
DDE_Tnp_1	PF01609.16	gi|15922266|ref|NP_377935.1|	-	3.3e-06	26.8	0.1	4.3e-06	26.4	0.1	1.2	1	0	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_2	PF04693.7	gi|15922267|ref|NP_377936.1|	-	6.2e-58	196.3	0.7	7.3e-58	196.1	0.5	1.0	1	0	0	1	1	1	1	Archaeal	putative	transposase	ISC1217
HTH_20	PF12840.2	gi|15922267|ref|NP_377936.1|	-	0.0011	18.7	0.0	0.002	17.8	0.0	1.5	1	1	0	1	1	1	1	Helix-turn-helix	domain
ATP-synt_E_2	PF08112.6	gi|15922267|ref|NP_377936.1|	-	0.011	15.8	0.5	0.18	11.8	0.1	2.2	2	0	0	2	2	2	0	ATP	synthase	epsilon	subunit
Phage_rep_org_N	PF09681.5	gi|15922267|ref|NP_377936.1|	-	0.02	14.4	0.1	0.025	14.1	0.1	1.3	1	0	0	1	1	1	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
TrmB	PF01978.14	gi|15922267|ref|NP_377936.1|	-	0.021	14.5	0.0	0.03	14.0	0.0	1.5	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_45	PF14947.1	gi|15922267|ref|NP_377936.1|	-	0.028	14.2	0.1	0.058	13.2	0.1	1.5	1	0	0	1	1	1	0	Winged	helix-turn-helix
DUF659	PF04937.10	gi|15922267|ref|NP_377936.1|	-	0.037	13.5	0.4	0.054	12.9	0.3	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF	659)
B-block_TFIIIC	PF04182.7	gi|15922267|ref|NP_377936.1|	-	0.037	13.8	0.0	0.046	13.5	0.0	1.3	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
HTH_24	PF13412.1	gi|15922267|ref|NP_377936.1|	-	0.056	12.8	0.0	0.11	11.9	0.0	1.4	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
Tim44	PF04280.10	gi|15922267|ref|NP_377936.1|	-	0.083	12.8	0.1	0.097	12.6	0.0	1.1	1	0	0	1	1	1	0	Tim44-like	domain
HTH_27	PF13463.1	gi|15922267|ref|NP_377936.1|	-	0.099	12.9	0.1	0.25	11.7	0.1	1.8	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
Polysacc_synt	PF01943.12	gi|15922268|ref|NP_377937.1|	-	2e-16	60.0	34.5	2e-16	60.0	23.9	2.3	2	0	0	2	2	2	1	Polysaccharide	biosynthesis	protein
Polysacc_synt_3	PF13440.1	gi|15922268|ref|NP_377937.1|	-	2.5e-10	40.2	27.6	2.5e-10	40.2	19.2	2.7	2	2	0	2	2	2	1	Polysaccharide	biosynthesis	protein
Polysacc_synt_C	PF14667.1	gi|15922268|ref|NP_377937.1|	-	0.0089	15.8	14.3	0.0089	15.8	9.9	4.1	1	1	2	4	4	4	2	Polysaccharide	biosynthesis	C-terminal	domain
DDE_Tnp_2	PF04693.7	gi|15922269|ref|NP_377938.1|	-	5e-174	577.9	2.2	5.8e-174	577.6	1.6	1.0	1	0	0	1	1	1	1	Archaeal	putative	transposase	ISC1217
DDE_Tnp_1	PF01609.16	gi|15922269|ref|NP_377938.1|	-	4.4e-05	23.1	0.1	9.2e-05	22.0	0.0	1.6	1	1	0	1	1	1	1	Transposase	DDE	domain
HTH_20	PF12840.2	gi|15922269|ref|NP_377938.1|	-	0.0069	16.1	0.0	0.013	15.2	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|15922269|ref|NP_377938.1|	-	0.083	12.6	0.0	0.25	11.0	0.0	1.8	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
DDE_5	PF13546.1	gi|15922269|ref|NP_377938.1|	-	0.098	11.4	0.0	0.17	10.7	0.0	1.3	1	0	0	1	1	1	0	DDE	superfamily	endonuclease
ATP-synt_E_2	PF08112.6	gi|15922269|ref|NP_377938.1|	-	0.32	11.1	2.9	0.87	9.6	0.1	2.7	3	0	0	3	3	3	0	ATP	synthase	epsilon	subunit
Methyltransf_26	PF13659.1	gi|15922270|ref|NP_377939.1|	-	0.053	13.5	0.0	0.072	13.1	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
Met_10	PF02475.11	gi|15922271|ref|NP_377940.1|	-	0.064	12.8	0.0	0.073	12.6	0.0	1.1	1	0	0	1	1	1	0	Met-10+	like-protein
MTS	PF05175.9	gi|15922271|ref|NP_377940.1|	-	0.065	12.6	0.0	0.07	12.5	0.0	1.1	1	0	0	1	1	1	0	Methyltransferase	small	domain
MethyltransfD12	PF02086.10	gi|15922271|ref|NP_377940.1|	-	0.08	12.3	0.0	0.093	12.1	0.0	1.0	1	0	0	1	1	1	0	D12	class	N6	adenine-specific	DNA	methyltransferase
CmcH_NodU	PF02543.10	gi|15922272|ref|NP_377941.1|	-	2.8e-79	266.8	0.0	3.5e-79	266.5	0.0	1.1	1	0	0	1	1	1	1	Carbamoyltransferase
Sua5_yciO_yrdC	PF01300.13	gi|15922272|ref|NP_377941.1|	-	0.13	11.5	0.0	0.54	9.4	0.0	2.0	1	1	0	1	1	1	0	Telomere	recombination
DDE_Tnp_1	PF01609.16	gi|15922273|ref|NP_377942.1|	-	3e-13	49.8	0.0	5.9e-13	48.8	0.0	1.4	1	1	0	1	1	1	1	Transposase	DDE	domain
DDE_Tnp_1_2	PF13586.1	gi|15922273|ref|NP_377942.1|	-	0.053	13.7	0.3	0.14	12.3	0.2	1.7	1	0	0	1	1	1	0	Transposase	DDE	domain
Glycos_transf_2	PF00535.21	gi|15922277|ref|NP_377946.1|	-	8e-15	54.9	1.4	1.7e-14	53.8	1.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_5	PF13712.1	gi|15922277|ref|NP_377946.1|	-	0.00089	18.5	2.9	0.0046	16.2	0.1	2.9	2	2	2	4	4	4	1	Glycosyltransferase	like	family
Glyco_transf_8	PF01501.15	gi|15922277|ref|NP_377946.1|	-	4	6.7	7.9	0.42	9.9	1.8	1.9	2	0	0	2	2	2	0	Glycosyl	transferase	family	8
Glycos_transf_2	PF00535.21	gi|15922278|ref|NP_377947.1|	-	5e-13	49.0	0.6	8.6e-13	48.3	0.4	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|15922278|ref|NP_377947.1|	-	3e-06	27.1	0.0	6.1e-06	26.2	0.0	1.6	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_transf_25	PF01755.12	gi|15922278|ref|NP_377947.1|	-	0.00043	19.9	0.8	0.001	18.7	0.6	1.6	1	0	0	1	1	1	1	Glycosyltransferase	family	25	(LPS	biosynthesis	protein)
Dysbindin	PF04440.11	gi|15922278|ref|NP_377947.1|	-	0.013	15.2	0.0	0.021	14.5	0.0	1.2	1	0	0	1	1	1	0	Dysbindin	(Dystrobrevin	binding	protein	1)
Glycos_transf_1	PF00534.15	gi|15922280|ref|NP_377949.1|	-	1.1e-24	86.8	0.1	1.7e-24	86.1	0.1	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|15922280|ref|NP_377949.1|	-	2.2e-12	47.2	0.0	4e-12	46.4	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|15922280|ref|NP_377949.1|	-	3.3e-05	24.0	0.0	5.9e-05	23.2	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Methyltransf_21	PF05050.7	gi|15922281|ref|NP_377950.1|	-	6.2e-17	62.0	0.0	7.8e-17	61.7	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	FkbM	domain
Methyltransf_18	PF12847.2	gi|15922281|ref|NP_377950.1|	-	3.4e-08	34.0	0.0	6.2e-08	33.2	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Met_10	PF02475.11	gi|15922281|ref|NP_377950.1|	-	3.7e-05	23.4	0.1	5.7e-05	22.7	0.1	1.4	1	1	0	1	1	1	1	Met-10+	like-protein
PrmA	PF06325.8	gi|15922281|ref|NP_377950.1|	-	0.0015	17.6	0.1	0.0022	17.1	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
PCMT	PF01135.14	gi|15922281|ref|NP_377950.1|	-	0.012	15.2	0.0	0.017	14.6	0.0	1.2	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_22	PF13383.1	gi|15922281|ref|NP_377950.1|	-	0.018	14.5	0.0	0.024	14.1	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|15922281|ref|NP_377950.1|	-	0.11	12.1	1.8	0.45	10.0	0.2	2.2	2	1	0	2	2	2	0	Methyltransferase	domain
YcfA	PF07927.7	gi|15922281|ref|NP_377950.1|	-	0.12	12.2	0.1	1.4	8.9	0.0	2.2	2	0	0	2	2	2	0	YcfA-like	protein
Glycos_transf_2	PF00535.21	gi|15922282|ref|NP_377951.1|	-	1.1e-15	57.7	1.7	2.2e-15	56.7	1.2	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|15922282|ref|NP_377951.1|	-	7.6e-06	25.8	0.0	1.1e-05	25.4	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glycos_transf_1	PF00534.15	gi|15922283|ref|NP_377952.1|	-	1.3e-14	53.9	0.0	3.4e-14	52.6	0.0	1.6	1	1	1	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|15922283|ref|NP_377952.1|	-	2.3e-06	27.7	0.0	3.7e-06	27.1	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|15922283|ref|NP_377952.1|	-	0.0078	16.4	0.0	0.017	15.3	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Ribosomal_S8	PF00410.14	gi|15922283|ref|NP_377952.1|	-	0.013	15.3	0.5	20	5.0	0.0	3.3	3	0	0	3	3	3	0	Ribosomal	protein	S8
Methyltransf_18	PF12847.2	gi|15922284|ref|NP_377953.1|	-	1.1e-10	42.0	0.0	2e-10	41.2	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|15922284|ref|NP_377953.1|	-	2.8e-08	33.2	0.2	4.1e-08	32.7	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_31	PF13847.1	gi|15922284|ref|NP_377953.1|	-	2e-07	30.7	0.1	4.2e-07	29.6	0.0	1.5	2	0	0	2	2	2	1	Methyltransferase	domain
Met_10	PF02475.11	gi|15922284|ref|NP_377953.1|	-	2.2e-07	30.6	0.6	3.8e-07	29.8	0.4	1.4	1	1	0	1	1	1	1	Met-10+	like-protein
MTS	PF05175.9	gi|15922284|ref|NP_377953.1|	-	3.3e-06	26.5	0.1	5.3e-06	25.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_15	PF09445.5	gi|15922284|ref|NP_377953.1|	-	4e-06	26.4	0.2	0.00024	20.7	0.1	2.2	2	0	0	2	2	2	1	RNA	cap	guanine-N2	methyltransferase
PCMT	PF01135.14	gi|15922284|ref|NP_377953.1|	-	9.9e-06	25.2	0.1	1.6e-05	24.5	0.1	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_26	PF13659.1	gi|15922284|ref|NP_377953.1|	-	2e-05	24.5	0.0	3.2e-05	23.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|15922284|ref|NP_377953.1|	-	0.00011	21.6	0.0	0.00015	21.1	0.0	1.2	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltransf_11	PF08241.7	gi|15922284|ref|NP_377953.1|	-	0.00013	22.3	0.0	0.00022	21.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|15922284|ref|NP_377953.1|	-	0.00016	20.7	0.0	0.00024	20.2	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_23	PF13489.1	gi|15922284|ref|NP_377953.1|	-	0.00048	19.8	0.0	0.00076	19.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltrans_SAM	PF10672.4	gi|15922284|ref|NP_377953.1|	-	0.00073	18.4	0.0	0.001	18.0	0.0	1.2	1	0	0	1	1	1	1	S-adenosylmethionine-dependent	methyltransferase
Methyltransf_25	PF13649.1	gi|15922284|ref|NP_377953.1|	-	0.0017	18.6	0.0	0.0028	18.0	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
TehB	PF03848.9	gi|15922284|ref|NP_377953.1|	-	0.0055	15.8	0.0	0.13	11.4	0.0	2.2	1	1	1	2	2	2	1	Tellurite	resistance	protein	TehB
GidB	PF02527.10	gi|15922284|ref|NP_377953.1|	-	0.01	15.0	0.0	0.015	14.4	0.0	1.2	1	0	0	1	1	1	0	rRNA	small	subunit	methyltransferase	G
Methyltransf_4	PF02390.12	gi|15922284|ref|NP_377953.1|	-	0.014	14.4	0.0	0.026	13.5	0.0	1.4	1	0	0	1	1	1	0	Putative	methyltransferase
Methyltransf_16	PF10294.4	gi|15922284|ref|NP_377953.1|	-	0.015	14.7	0.2	0.033	13.6	0.1	1.5	2	0	0	2	2	1	0	Putative	methyltransferase
DREV	PF05219.7	gi|15922284|ref|NP_377953.1|	-	0.018	13.8	0.0	0.039	12.8	0.0	1.5	1	0	0	1	1	1	0	DREV	methyltransferase
tRNA_U5-meth_tr	PF05958.6	gi|15922284|ref|NP_377953.1|	-	0.02	13.6	0.0	0.03	13.0	0.0	1.2	1	0	0	1	1	1	0	tRNA	(Uracil-5-)-methyltransferase
Spermine_synth	PF01564.12	gi|15922284|ref|NP_377953.1|	-	0.042	12.7	0.1	0.064	12.1	0.1	1.3	1	0	0	1	1	1	0	Spermine/spermidine	synthase
Methyltransf_12	PF08242.7	gi|15922284|ref|NP_377953.1|	-	0.043	14.2	0.0	0.073	13.5	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
CMAS	PF02353.15	gi|15922284|ref|NP_377953.1|	-	0.044	12.8	0.9	0.19	10.7	0.1	2.0	2	0	0	2	2	2	0	Mycolic	acid	cyclopropane	synthetase
DUF938	PF06080.7	gi|15922284|ref|NP_377953.1|	-	0.049	13.1	0.0	0.075	12.5	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF938)
DNA_methylase	PF00145.12	gi|15922284|ref|NP_377953.1|	-	0.063	12.3	0.0	0.12	11.4	0.0	1.5	1	0	0	1	1	1	0	C-5	cytosine-specific	DNA	methylase
Thioredoxin_8	PF13905.1	gi|15922284|ref|NP_377953.1|	-	0.067	13.3	0.1	0.58	10.3	0.0	2.3	3	0	0	3	3	2	0	Thioredoxin-like
Ubie_methyltran	PF01209.13	gi|15922284|ref|NP_377953.1|	-	0.1	11.7	0.1	0.16	11.0	0.1	1.2	1	0	0	1	1	1	0	ubiE/COQ5	methyltransferase	family
Glycos_transf_2	PF00535.21	gi|15922285|ref|NP_377954.1|	-	2.5e-09	37.0	0.2	6.3e-09	35.7	0.0	1.8	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
dTDP_sugar_isom	PF00908.12	gi|15922286|ref|NP_377955.1|	-	4.6e-54	182.4	0.0	5.6e-54	182.1	0.0	1.0	1	0	0	1	1	1	1	dTDP-4-dehydrorhamnose	3,5-epimerase
FdtA	PF05523.6	gi|15922286|ref|NP_377955.1|	-	0.063	12.7	0.0	0.09	12.2	0.0	1.3	1	0	0	1	1	1	0	WxcM-like,	C-terminal
RmlD_sub_bind	PF04321.12	gi|15922287|ref|NP_377956.1|	-	3.7e-66	222.9	0.0	4.3e-66	222.7	0.0	1.0	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Epimerase	PF01370.16	gi|15922287|ref|NP_377956.1|	-	1.2e-18	67.4	0.0	1.7e-18	66.8	0.0	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
NAD_binding_4	PF07993.7	gi|15922287|ref|NP_377956.1|	-	1.7e-08	33.7	0.0	1.7e-06	27.1	0.0	2.2	2	0	0	2	2	2	2	Male	sterility	protein
Polysacc_synt_2	PF02719.10	gi|15922287|ref|NP_377956.1|	-	1.1e-07	31.0	1.0	2.2e-05	23.5	0.7	2.7	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_10	PF13460.1	gi|15922287|ref|NP_377956.1|	-	1.6e-05	25.0	0.0	2.3e-05	24.4	0.0	1.2	1	0	0	1	1	1	1	NADH(P)-binding
3Beta_HSD	PF01073.14	gi|15922287|ref|NP_377956.1|	-	0.001	17.8	0.1	0.0043	15.7	0.1	1.8	1	1	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
DFP	PF04127.10	gi|15922287|ref|NP_377956.1|	-	0.012	15.2	0.0	0.019	14.5	0.0	1.3	1	0	0	1	1	1	0	DNA	/	pantothenate	metabolism	flavoprotein
Semialdhyde_dh	PF01118.19	gi|15922287|ref|NP_377956.1|	-	0.02	15.2	0.0	0.035	14.4	0.0	1.5	1	1	0	1	1	1	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
adh_short	PF00106.20	gi|15922287|ref|NP_377956.1|	-	0.03	14.2	0.2	0.32	10.9	0.0	2.0	1	1	1	2	2	2	0	short	chain	dehydrogenase
NTP_transferase	PF00483.18	gi|15922288|ref|NP_377957.1|	-	3.5e-50	170.6	0.0	4.4e-50	170.2	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|15922288|ref|NP_377957.1|	-	1.9e-10	41.0	0.0	2.7e-10	40.5	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep	PF00132.19	gi|15922288|ref|NP_377957.1|	-	1.4e-05	24.3	6.2	0.12	11.9	0.5	5.5	3	1	2	5	5	5	2	Bacterial	transferase	hexapeptide	(six	repeats)
Fucokinase	PF07959.7	gi|15922288|ref|NP_377957.1|	-	0.0055	15.3	0.3	0.0088	14.6	0.2	1.3	1	0	0	1	1	1	1	L-fucokinase
IspD	PF01128.14	gi|15922288|ref|NP_377957.1|	-	0.0062	16.0	0.1	0.012	15.1	0.0	1.5	1	1	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
Epimerase	PF01370.16	gi|15922289|ref|NP_377958.1|	-	1.3e-60	204.7	0.0	1.6e-60	204.5	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|15922289|ref|NP_377958.1|	-	4.5e-20	71.6	0.0	6.1e-20	71.2	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
3Beta_HSD	PF01073.14	gi|15922289|ref|NP_377958.1|	-	2.8e-14	52.5	0.0	3.5e-14	52.1	0.0	1.1	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
Polysacc_synt_2	PF02719.10	gi|15922289|ref|NP_377958.1|	-	8.6e-13	47.8	0.0	2.4e-12	46.3	0.0	1.7	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.7	gi|15922289|ref|NP_377958.1|	-	1.4e-12	47.0	0.4	4.7e-11	42.0	0.3	2.2	1	1	0	1	1	1	1	Male	sterility	protein
NAD_binding_10	PF13460.1	gi|15922289|ref|NP_377958.1|	-	1.8e-07	31.3	0.0	2.3e-07	31.0	0.0	1.1	1	0	0	1	1	1	1	NADH(P)-binding
NmrA	PF05368.8	gi|15922289|ref|NP_377958.1|	-	0.00085	18.6	0.0	0.048	12.8	0.0	2.2	2	0	0	2	2	2	1	NmrA-like	family
adh_short	PF00106.20	gi|15922289|ref|NP_377958.1|	-	0.092	12.6	0.3	0.27	11.1	0.2	1.8	1	1	0	1	1	1	0	short	chain	dehydrogenase
7TM_GPCR_Sra	PF02117.11	gi|15922290|ref|NP_377959.1|	-	0.4	9.2	3.8	0.4	9.2	2.7	1.0	1	0	0	1	1	1	0	Serpentine	type	7TM	GPCR	chemoreceptor	Sra
DUF3733	PF12534.3	gi|15922290|ref|NP_377959.1|	-	9	5.6	6.3	13	5.1	1.3	2.1	1	1	1	2	2	2	0	Leucine-rich	repeat	containing	protein	8
RAMPs	PF03787.10	gi|15922292|ref|NP_377961.1|	-	2.1e-28	99.6	1.5	4.9e-28	98.4	1.1	1.5	1	1	0	1	1	1	1	RAMP	superfamily
UPF0061	PF02696.9	gi|15922293|ref|NP_377962.1|	-	0.042	12.1	0.0	0.043	12.1	0.0	1.0	1	0	0	1	1	1	0	Uncharacterized	ACR,	YdiU/UPF0061	family
TypeIII_RM_meth	PF12564.3	gi|15922293|ref|NP_377962.1|	-	6.5	6.8	7.4	1.9	8.4	0.8	2.8	1	1	1	2	2	2	0	Type	III	restriction/modification	enzyme	methylation	subunit
RAMPs	PF03787.10	gi|15922294|ref|NP_377963.1|	-	1.1e-20	74.4	8.2	4e-19	69.3	0.5	2.6	2	1	0	2	2	2	2	RAMP	superfamily
PLDc_3	PF13918.1	gi|15922294|ref|NP_377963.1|	-	0.0069	15.8	0.2	0.11	11.9	0.0	2.4	2	0	0	2	2	2	1	PLD-like	domain
RAMPs	PF03787.10	gi|15922295|ref|NP_377964.1|	-	1.4e-10	41.4	1.8	7.3e-10	39.0	0.0	2.7	1	1	1	2	2	2	1	RAMP	superfamily
ABC_sub_bind	PF04392.7	gi|15922295|ref|NP_377964.1|	-	0.00031	19.7	0.1	0.00046	19.2	0.1	1.2	1	0	0	1	1	1	1	ABC	transporter	substrate	binding	protein
DUF3692	PF12469.3	gi|15922296|ref|NP_377965.1|	-	1.1e-27	96.6	1.5	1.1e-26	93.4	0.0	3.5	4	1	0	4	4	4	1	CRISPR-associated	protein
Cas_Cmr3	PF09700.5	gi|15922297|ref|NP_377966.1|	-	1.4e-25	90.4	0.0	1.1e-14	54.6	0.0	3.0	1	1	1	2	2	2	2	CRISPR-associated	protein	(Cas_Cmr3)
DisA-linker	PF10635.4	gi|15922297|ref|NP_377966.1|	-	0.00027	20.4	0.1	0.17	11.3	0.0	2.2	1	1	1	2	2	2	2	DisA	bacterial	checkpoint	controller	linker	region
DDE_Tnp_IS240	PF13610.1	gi|15922298|ref|NP_377967.1|	-	1.5e-05	24.9	0.3	2e-05	24.5	0.2	1.1	1	0	0	1	1	1	1	DDE	domain
DDE_Tnp_IS66	PF03050.9	gi|15922298|ref|NP_377967.1|	-	0.0024	17.1	0.2	0.0036	16.5	0.1	1.2	1	0	0	1	1	1	1	Transposase	IS66	family
rve	PF00665.21	gi|15922298|ref|NP_377967.1|	-	0.029	14.4	0.2	0.041	13.9	0.1	1.3	1	0	0	1	1	1	0	Integrase	core	domain
DUF3788	PF12663.2	gi|15922298|ref|NP_377967.1|	-	0.1	12.2	0.1	0.16	11.6	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3788)
HD	PF01966.17	gi|15922299|ref|NP_377968.1|	-	2.8e-11	43.5	0.3	6.5e-11	42.3	0.2	1.7	1	0	0	1	1	1	1	HD	domain
DUF600	PF04634.7	gi|15922300|ref|NP_377969.1|	-	0.065	13.2	0.5	0.077	13.0	0.4	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF600
DUF3243	PF11588.3	gi|15922300|ref|NP_377969.1|	-	0.12	12.3	0.0	0.2	11.6	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3243)
TPR_11	PF13414.1	gi|15922302|ref|NP_377971.1|	-	9.4e-10	37.9	5.2	9.9e-08	31.5	0.0	3.7	1	1	2	3	3	3	1	TPR	repeat
TPR_2	PF07719.12	gi|15922302|ref|NP_377971.1|	-	2.3e-07	30.2	2.2	0.0012	18.6	0.0	4.7	5	0	0	5	5	5	1	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|15922302|ref|NP_377971.1|	-	2.2e-06	27.7	5.7	0.00014	21.9	0.0	2.7	3	0	0	3	3	3	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_1	PF00515.23	gi|15922302|ref|NP_377971.1|	-	2.9e-06	26.6	0.1	0.018	14.6	0.1	3.9	4	0	0	4	4	4	2	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|15922302|ref|NP_377971.1|	-	7.6e-06	26.1	1.1	0.0001	22.5	0.0	2.4	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|15922302|ref|NP_377971.1|	-	0.0029	18.2	0.0	0.02	15.5	0.0	2.3	2	1	1	3	3	3	1	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|15922302|ref|NP_377971.1|	-	0.0057	16.5	1.1	0.19	11.6	0.0	3.4	1	1	2	3	3	3	1	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|15922302|ref|NP_377971.1|	-	0.015	15.4	3.1	2.5	8.4	0.0	4.2	5	0	0	5	5	5	0	Tetratricopeptide	repeat
Glyco_transf_41	PF13844.1	gi|15922302|ref|NP_377971.1|	-	0.015	13.3	0.1	0.016	13.1	0.0	1.1	1	0	0	1	1	1	0	Glycosyl	transferase	family	41
TPR_6	PF13174.1	gi|15922302|ref|NP_377971.1|	-	0.04	14.3	0.2	4.2	8.0	0.0	3.6	4	1	0	4	4	4	0	Tetratricopeptide	repeat
DDE_Tnp_1	PF01609.16	gi|15922303|ref|NP_377972.1|	-	0.0059	16.1	0.0	0.93	8.9	0.0	2.2	1	1	1	2	2	2	2	Transposase	DDE	domain
PaREP1	PF05942.6	gi|15922304|ref|NP_377973.1|	-	6.5e-06	25.9	0.5	7.9e-06	25.7	0.4	1.2	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
DUF273	PF03314.9	gi|15922304|ref|NP_377973.1|	-	0.00079	18.7	0.1	0.00092	18.5	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF273
DUF1699	PF08004.6	gi|15922304|ref|NP_377973.1|	-	0.073	12.6	0.8	0.093	12.2	0.5	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1699)
YpjP	PF14005.1	gi|15922305|ref|NP_377974.1|	-	0.84	9.4	5.7	0.7	9.6	0.1	3.4	3	1	1	4	4	4	0	YpjP-like	protein
SapB_1	PF05184.10	gi|15922305|ref|NP_377974.1|	-	7	6.6	9.5	1.5	8.7	0.1	3.8	3	0	0	3	3	3	0	Saposin-like	type	B,	region	1
COPI_C	PF06957.6	gi|15922307|ref|NP_377976.1|	-	0.0033	16.0	0.0	0.0036	15.8	0.0	1.0	1	0	0	1	1	1	1	Coatomer	(COPI)	alpha	subunit	C-terminus
DUF2100	PF09873.4	gi|15922307|ref|NP_377976.1|	-	0.014	14.8	0.7	0.015	14.7	0.5	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2100)
CobD_Cbib	PF03186.8	gi|15922307|ref|NP_377976.1|	-	0.039	13.0	0.0	0.043	12.9	0.0	1.0	1	0	0	1	1	1	0	CobD/Cbib	protein
RAMPs	PF03787.10	gi|15922308|ref|NP_377977.1|	-	0.00046	20.1	0.7	0.0008	19.3	0.5	1.5	1	1	0	1	1	1	1	RAMP	superfamily
RecR	PF02132.10	gi|15922310|ref|NP_377979.1|	-	0.019	14.3	2.3	2.7	7.4	0.2	2.4	2	0	0	2	2	2	0	RecR	protein
RAMPs	PF03787.10	gi|15922310|ref|NP_377979.1|	-	0.14	12.0	3.1	2.3	8.0	0.0	2.3	1	1	1	2	2	2	0	RAMP	superfamily
Pkinase	PF00069.20	gi|15922312|ref|NP_377981.1|	-	4.5e-34	117.7	0.0	9.6e-34	116.6	0.0	1.5	2	0	0	2	2	2	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|15922312|ref|NP_377981.1|	-	5.8e-17	61.6	0.0	4e-16	58.8	0.0	2.1	1	1	0	1	1	1	1	Protein	tyrosine	kinase
TPR_11	PF13414.1	gi|15922312|ref|NP_377981.1|	-	1.6e-12	46.8	17.3	1.2e-09	37.7	0.1	4.7	2	2	0	3	3	3	2	TPR	repeat
Apc3	PF12895.2	gi|15922312|ref|NP_377981.1|	-	8e-11	41.9	10.7	3.5e-05	23.8	0.0	4.0	2	2	2	4	4	4	3	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_16	PF13432.1	gi|15922312|ref|NP_377981.1|	-	1.1e-07	32.3	2.2	1.2e-05	25.8	0.0	4.2	2	1	3	5	5	5	1	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|15922312|ref|NP_377981.1|	-	1.9e-07	30.4	21.4	3.8e-06	26.4	0.0	6.8	8	0	0	8	8	7	1	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|15922312|ref|NP_377981.1|	-	4.6e-06	26.8	9.9	8.1e-05	22.8	0.2	4.2	3	1	1	4	4	4	1	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|15922312|ref|NP_377981.1|	-	1.6e-05	24.3	16.6	0.00044	19.7	0.2	5.4	6	0	0	6	6	6	2	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|15922312|ref|NP_377981.1|	-	8.1e-05	22.5	11.2	0.15	12.3	0.0	5.8	5	0	0	5	5	5	1	Tetratricopeptide	repeat
Kinase-like	PF14531.1	gi|15922312|ref|NP_377981.1|	-	0.00018	20.5	0.0	0.00088	18.3	0.0	2.0	2	0	0	2	2	2	1	Kinase-like
TPR_14	PF13428.1	gi|15922312|ref|NP_377981.1|	-	0.0037	17.7	2.7	0.12	13.0	0.0	4.3	3	1	2	5	5	4	1	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|15922312|ref|NP_377981.1|	-	0.0079	16.1	0.0	0.0079	16.1	0.0	4.0	3	1	2	5	5	5	1	Tetratricopeptide	repeat
THDPS_N	PF14790.1	gi|15922312|ref|NP_377981.1|	-	0.026	14.1	0.0	0.059	12.9	0.0	1.6	1	0	0	1	1	1	0	Tetrahydrodipicolinate	N-succinyltransferase	N-terminal
TPR_6	PF13174.1	gi|15922312|ref|NP_377981.1|	-	0.14	12.6	16.4	5.4	7.7	0.0	5.9	7	0	0	7	7	6	0	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|15922312|ref|NP_377981.1|	-	0.17	11.7	14.6	2.4	8.1	0.2	5.3	4	1	1	5	5	5	0	Tetratricopeptide	repeat
HSDR_N_2	PF13588.1	gi|15922313|ref|NP_377982.1|	-	2.3e-09	37.0	1.4	0.00013	21.7	0.1	2.3	2	0	0	2	2	2	2	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
Rick_17kDa_Anti	PF05433.10	gi|15922314|ref|NP_377983.1|	-	5.8e-11	41.8	4.9	7.6e-11	41.4	3.4	1.2	1	0	0	1	1	1	1	Glycine	zipper	2TM	domain
Gly-zipper_OmpA	PF13436.1	gi|15922314|ref|NP_377983.1|	-	3.2e-08	33.2	0.0	4e-08	32.9	0.0	1.1	1	0	0	1	1	1	1	Glycine-zipper	containing	OmpA-like	membrane	domain
Gly-zipper_Omp	PF13488.1	gi|15922314|ref|NP_377983.1|	-	3.9e-08	32.8	5.3	5.6e-08	32.3	3.6	1.2	1	0	0	1	1	1	1	Glycine	zipper
Gly-zipper_YMGG	PF13441.1	gi|15922314|ref|NP_377983.1|	-	2e-07	30.3	3.8	3.1e-07	29.7	2.7	1.2	1	0	0	1	1	1	1	YMGG-like	Gly-zipper
TraT	PF05818.7	gi|15922314|ref|NP_377983.1|	-	3.6e-05	23.2	0.8	5.9e-05	22.5	0.3	1.4	1	1	1	2	2	2	1	Enterobacterial	TraT	complement	resistance	protein
Bacteriocin_IIc	PF10439.4	gi|15922314|ref|NP_377983.1|	-	0.00043	20.3	0.7	0.0007	19.6	0.5	1.3	1	0	0	1	1	1	1	Bacteriocin	class	II	with	double-glycine	leader	peptide
Romo1	PF10247.4	gi|15922314|ref|NP_377983.1|	-	0.0037	17.4	1.7	1.4	9.1	0.3	2.2	2	0	0	2	2	2	2	Reactive	mitochondrial	oxygen	species	modulator	1
DUF456	PF04306.8	gi|15922314|ref|NP_377983.1|	-	0.011	15.7	0.4	0.016	15.2	0.2	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF456)
DUF3169	PF11368.3	gi|15922314|ref|NP_377983.1|	-	0.021	14.0	1.0	1.1	8.3	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3169)
DUF1269	PF06897.7	gi|15922314|ref|NP_377983.1|	-	0.041	13.9	5.4	0.46	10.5	2.7	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1269)
Chlam_vir	PF05475.6	gi|15922314|ref|NP_377983.1|	-	0.05	12.7	0.7	0.13	11.3	0.1	1.7	1	1	1	2	2	2	0	Chlamydia	virulence	protein	PGP3-D
MtrC	PF04211.8	gi|15922314|ref|NP_377983.1|	-	0.074	12.0	0.3	0.1	11.6	0.2	1.2	1	0	0	1	1	1	0	Tetrahydromethanopterin	S-methyltransferase,	subunit	C
Colicin_V	PF02674.11	gi|15922314|ref|NP_377983.1|	-	0.12	12.2	0.2	0.19	11.5	0.1	1.3	1	0	0	1	1	1	0	Colicin	V	production	protein
XhlA	PF10779.4	gi|15922314|ref|NP_377983.1|	-	0.96	9.4	0.1	0.96	9.4	0.1	2.6	3	0	0	3	3	3	0	Haemolysin	XhlA
MscL	PF01741.13	gi|15922314|ref|NP_377983.1|	-	1.2	9.2	6.0	34	4.6	4.1	2.2	1	1	0	1	1	1	0	Large-conductance	mechanosensitive	channel,	MscL
Transgly_assoc	PF04226.8	gi|15922314|ref|NP_377983.1|	-	1.3	9.2	6.8	6.7	6.8	5.5	1.7	1	1	1	2	2	2	0	Transglycosylase	associated	protein
DUF2273	PF10031.4	gi|15922314|ref|NP_377983.1|	-	5.7	6.6	10.0	8.9	6.0	2.0	2.4	2	0	0	2	2	2	0	Small	integral	membrane	protein	(DUF2273)
Antitoxin-MazE	PF04014.13	gi|15922315|ref|NP_377984.1|	-	3e-12	45.9	1.4	5.2e-12	45.2	0.9	1.4	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
SH3_9	PF14604.1	gi|15922315|ref|NP_377984.1|	-	0.011	15.2	0.1	0.055	13.0	0.0	1.9	1	1	0	1	1	1	0	Variant	SH3	domain
TOBE	PF03459.12	gi|15922315|ref|NP_377984.1|	-	0.016	15.3	0.0	0.34	11.0	0.0	2.1	2	0	0	2	2	2	0	TOBE	domain
Methyltrans_RNA	PF04452.9	gi|15922315|ref|NP_377984.1|	-	0.12	11.5	0.0	0.15	11.1	0.0	1.1	1	0	0	1	1	1	0	RNA	methyltransferase
TrkA_C	PF02080.16	gi|15922315|ref|NP_377984.1|	-	0.19	11.3	0.9	0.39	10.3	0.3	1.8	2	1	0	2	2	2	0	TrkA-C	domain
DUF104	PF01954.11	gi|15922315|ref|NP_377984.1|	-	0.39	10.7	3.0	0.13	12.2	0.4	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF104
DDE_Tnp_2	PF04693.7	gi|15922316|ref|NP_377985.1|	-	1.9e-28	99.4	4.3	9.7e-17	60.9	0.1	2.1	1	1	0	2	2	2	2	Archaeal	putative	transposase	ISC1217
RP-C_C	PF11800.3	gi|15922316|ref|NP_377985.1|	-	0.03	14.0	1.2	0.034	13.8	0.8	1.1	1	0	0	1	1	1	0	Replication	protein	C	C-terminal	region
DDE_5	PF13546.1	gi|15922316|ref|NP_377985.1|	-	0.036	12.9	0.0	0.048	12.5	0.0	1.2	1	1	0	1	1	1	0	DDE	superfamily	endonuclease
Lipocalin_3	PF12702.2	gi|15922316|ref|NP_377985.1|	-	0.055	13.4	0.5	0.12	12.4	0.0	1.7	2	1	0	2	2	2	0	Lipocalin-like
DDE_Tnp_2	PF04693.7	gi|15922317|ref|NP_377986.1|	-	4.6e-24	85.0	3.7	1.1e-11	44.3	0.0	2.1	1	1	1	2	2	2	2	Archaeal	putative	transposase	ISC1217
DUF1230	PF06799.6	gi|15922317|ref|NP_377986.1|	-	0.064	13.1	0.0	0.074	12.9	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1230)
UPF0029	PF01205.14	gi|15922317|ref|NP_377986.1|	-	0.14	11.8	0.1	0.19	11.4	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	family	UPF0029
AAA_14	PF13173.1	gi|15922318|ref|NP_377987.1|	-	9.1e-31	106.4	1.2	2.4e-30	105.0	0.3	2.0	2	0	0	2	2	2	1	AAA	domain
DUF4143	PF13635.1	gi|15922318|ref|NP_377987.1|	-	7e-11	42.1	0.1	9.1e-11	41.7	0.1	1.4	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
Arch_ATPase	PF01637.13	gi|15922318|ref|NP_377987.1|	-	0.00053	19.7	6.2	0.037	13.7	1.1	3.8	2	2	1	3	3	3	2	Archaeal	ATPase
T2SE	PF00437.15	gi|15922318|ref|NP_377987.1|	-	0.012	14.4	0.0	0.019	13.8	0.0	1.2	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_28	PF13521.1	gi|15922318|ref|NP_377987.1|	-	0.027	14.4	0.2	1.5	8.7	0.0	2.5	2	0	0	2	2	2	0	AAA	domain
AAA_25	PF13481.1	gi|15922318|ref|NP_377987.1|	-	0.061	12.7	0.0	0.12	11.7	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Glyoxalase_4	PF13669.1	gi|15922318|ref|NP_377987.1|	-	0.078	13.0	0.0	0.17	11.9	0.0	1.5	1	0	0	1	1	1	0	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
DUF3353	PF11833.3	gi|15922320|ref|NP_377989.1|	-	0.84	9.0	5.7	1	8.7	3.9	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3353)
VirB3	PF05101.8	gi|15922320|ref|NP_377989.1|	-	1.4	8.9	6.1	0.39	10.7	0.1	2.1	1	1	1	2	2	2	0	Type	IV	secretory	pathway,	VirB3-like	protein
TcpE	PF12648.2	gi|15922320|ref|NP_377989.1|	-	2.4	8.3	10.4	3.3	7.8	0.6	2.0	1	1	1	2	2	2	0	TcpE	family
TMEM18	PF14770.1	gi|15922320|ref|NP_377989.1|	-	5	6.6	7.0	25	4.4	2.3	2.2	1	1	1	2	2	2	0	Transmembrane	protein	18
PaREP1	PF05942.6	gi|15922321|ref|NP_377990.1|	-	2.8e-33	114.2	2.9	4.1e-33	113.6	2.0	1.3	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
DUF357	PF04010.8	gi|15922321|ref|NP_377990.1|	-	0.049	13.3	1.3	0.15	11.7	0.1	2.4	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF357)
SCO1-SenC	PF02630.9	gi|15922321|ref|NP_377990.1|	-	0.1	12.2	0.1	0.16	11.6	0.0	1.3	1	0	0	1	1	1	0	SCO1/SenC
Phasin_2	PF09361.5	gi|15922321|ref|NP_377990.1|	-	0.19	11.8	2.0	0.27	11.3	0.5	2.0	2	1	0	2	2	2	0	Phasin	protein
NAAA-beta	PF15508.1	gi|15922321|ref|NP_377990.1|	-	0.52	10.7	2.8	1.4	9.2	0.3	2.6	2	1	1	3	3	3	0	beta	subunit	of	N-acylethanolamine-hydrolyzing	acid	amidase
PRD	PF00874.15	gi|15922321|ref|NP_377990.1|	-	1.6	8.9	4.9	6.1	7.0	1.0	2.5	1	1	1	2	2	2	0	PRD	domain
ARGLU	PF15346.1	gi|15922321|ref|NP_377990.1|	-	3.1	7.5	7.8	11	5.8	5.4	1.8	1	1	0	1	1	1	0	Arginine	and	glutamate-rich	1
PIN	PF01850.16	gi|15922322|ref|NP_377991.1|	-	1.8e-14	54.1	1.7	2.1e-14	53.8	1.2	1.1	1	0	0	1	1	1	1	PIN	domain
DUF3800	PF12686.2	gi|15922324|ref|NP_377993.1|	-	5e-21	75.4	5.8	6.3e-21	75.1	4.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3800)
OrfB_Zn_ribbon	PF07282.6	gi|15922326|ref|NP_377995.1|	-	1.1e-22	79.4	1.4	5.3e-22	77.2	0.2	2.3	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|15922326|ref|NP_377995.1|	-	2.8e-06	26.9	0.6	5.1e-06	26.0	0.4	1.5	1	0	0	1	1	1	1	Probable	transposase
zinc_ribbon_2	PF13240.1	gi|15922326|ref|NP_377995.1|	-	0.0029	17.0	5.2	0.0051	16.2	3.6	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|15922326|ref|NP_377995.1|	-	0.003	17.3	0.7	0.0051	16.6	0.5	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|15922326|ref|NP_377995.1|	-	0.013	14.6	5.0	0.16	11.1	3.8	2.1	1	1	1	2	2	2	0	zinc-ribbon	domain
PLU-1	PF08429.6	gi|15922326|ref|NP_377995.1|	-	0.018	13.9	0.2	0.025	13.4	0.1	1.2	1	0	0	1	1	1	0	PLU-1-like	protein
LytTR	PF04397.10	gi|15922326|ref|NP_377995.1|	-	0.021	14.8	0.9	0.049	13.7	0.2	1.9	2	0	0	2	2	2	0	LytTr	DNA-binding	domain
zf-HYPF	PF07503.7	gi|15922326|ref|NP_377995.1|	-	0.03	13.7	1.7	1.3	8.4	0.1	2.6	2	0	0	2	2	2	0	HypF	finger
HypA	PF01155.14	gi|15922326|ref|NP_377995.1|	-	0.045	13.4	0.2	0.13	11.9	0.0	1.8	2	0	0	2	2	2	0	Hydrogenase	expression/synthesis	hypA	family
Rep_fac-A_C	PF08646.5	gi|15922326|ref|NP_377995.1|	-	0.11	12.2	0.2	0.26	10.9	0.2	1.6	1	0	0	1	1	1	0	Replication	factor-A	C	terminal	domain
Sgf11	PF08209.6	gi|15922326|ref|NP_377995.1|	-	0.11	11.8	3.4	2.3	7.6	0.1	2.4	1	1	1	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
TF_Zn_Ribbon	PF08271.7	gi|15922326|ref|NP_377995.1|	-	0.49	9.7	2.5	1.2	8.4	1.8	1.7	1	0	0	1	1	1	0	TFIIB	zinc-binding
DUF1610	PF07754.6	gi|15922326|ref|NP_377995.1|	-	0.73	10.0	8.0	4	7.6	0.3	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
zf-TFIIB	PF13453.1	gi|15922326|ref|NP_377995.1|	-	0.94	8.7	3.1	2.5	7.3	2.1	1.8	1	1	0	1	1	1	0	Transcription	factor	zinc-finger
zf-ISL3	PF14690.1	gi|15922326|ref|NP_377995.1|	-	2	8.5	6.4	3.1	7.8	0.7	2.9	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
AAA_21	PF13304.1	gi|15922327|ref|NP_377996.1|	-	5e-36	125.1	16.6	8.2e-36	124.4	11.5	1.4	1	0	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|15922327|ref|NP_377996.1|	-	1.5e-18	66.8	0.0	3e-18	65.8	0.0	1.5	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|15922327|ref|NP_377996.1|	-	9.7e-14	51.2	17.3	1.6e-06	27.4	4.8	2.5	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|15922327|ref|NP_377996.1|	-	2.6e-13	50.7	4.9	2.1e-12	47.8	3.4	2.4	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|15922327|ref|NP_377996.1|	-	3e-06	26.6	0.0	8.9e-06	25.1	0.0	1.8	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.1	gi|15922327|ref|NP_377996.1|	-	0.00058	20.0	0.1	0.51	10.4	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_14	PF13173.1	gi|15922327|ref|NP_377996.1|	-	0.0014	18.5	0.4	0.66	9.8	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_13	PF13166.1	gi|15922327|ref|NP_377996.1|	-	0.0021	16.6	0.3	0.0052	15.3	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
DUF2813	PF11398.3	gi|15922327|ref|NP_377996.1|	-	0.0038	16.3	0.0	1.4	7.8	0.1	2.3	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF2813)
ABC_tran	PF00005.22	gi|15922327|ref|NP_377996.1|	-	0.0075	16.5	0.3	0.03	14.6	0.0	2.0	2	1	0	2	2	2	1	ABC	transporter
AAA_16	PF13191.1	gi|15922327|ref|NP_377996.1|	-	0.17	11.8	0.0	0.32	10.9	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
RloB	PF13707.1	gi|15922328|ref|NP_377997.1|	-	0.019	14.5	0.0	0.02	14.5	0.0	1.2	1	0	0	1	1	1	0	RloB-like	protein
DUF4276	PF14103.1	gi|15922328|ref|NP_377997.1|	-	0.047	13.5	0.0	0.19	11.5	0.0	1.8	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4276)
NUFIP1	PF10453.4	gi|15922329|ref|NP_377998.1|	-	0.13	11.7	4.7	1.8	8.1	0.4	2.2	1	1	1	2	2	2	0	Nuclear	fragile	X	mental	retardation-interacting	protein	1	(NUFIP1)
EnY2	PF10163.4	gi|15922329|ref|NP_377998.1|	-	0.14	12.1	1.2	0.18	11.7	0.8	1.3	1	1	0	1	1	1	0	Transcription	factor	e(y)2
PIN	PF01850.16	gi|15922330|ref|NP_377999.1|	-	1.8e-05	25.0	0.6	2e-05	24.8	0.4	1.1	1	0	0	1	1	1	1	PIN	domain
MoCF_biosynth	PF00994.19	gi|15922330|ref|NP_377999.1|	-	0.06	12.7	0.0	0.13	11.7	0.0	1.5	2	0	0	2	2	2	0	Probable	molybdopterin	binding	domain
Hormone_2	PF00123.15	gi|15922330|ref|NP_377999.1|	-	0.09	12.6	0.2	0.27	11.1	0.1	1.8	1	1	0	1	1	1	0	Peptide	hormone
AAA_14	PF13173.1	gi|15922332|ref|NP_378001.1|	-	3.5e-06	26.9	0.1	6.4e-06	26.0	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|15922332|ref|NP_378001.1|	-	5.9e-06	26.1	4.3	0.014	15.1	0.1	3.3	2	1	1	3	3	3	2	Archaeal	ATPase
Viral_helicase1	PF01443.13	gi|15922332|ref|NP_378001.1|	-	0.0037	16.8	0.0	0.0058	16.1	0.0	1.2	1	0	0	1	1	1	1	Viral	(Superfamily	1)	RNA	helicase
Fe_dep_repress	PF01325.14	gi|15922332|ref|NP_378001.1|	-	0.012	15.5	0.0	0.033	14.1	0.0	1.8	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DUF4143	PF13635.1	gi|15922332|ref|NP_378001.1|	-	0.012	15.7	0.1	0.028	14.6	0.1	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4143)
TrmB	PF01978.14	gi|15922332|ref|NP_378001.1|	-	0.014	15.0	0.4	0.072	12.8	0.1	2.4	1	1	1	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
AAA_22	PF13401.1	gi|15922332|ref|NP_378001.1|	-	0.019	15.0	0.1	1.8	8.7	0.1	2.4	1	1	1	2	2	2	0	AAA	domain
DUF234	PF03008.9	gi|15922332|ref|NP_378001.1|	-	0.049	13.7	0.1	0.14	12.2	0.1	1.8	1	0	0	1	1	1	0	Archaea	bacterial	proteins	of	unknown	function
DUF1703	PF08011.6	gi|15922332|ref|NP_378001.1|	-	0.078	12.7	0.4	0.23	11.2	0.3	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1703)
MarR_2	PF12802.2	gi|15922332|ref|NP_378001.1|	-	0.094	12.3	0.3	0.55	9.9	0.0	2.4	3	0	0	3	3	3	0	MarR	family
HSDR_N	PF04313.9	gi|15922332|ref|NP_378001.1|	-	0.11	12.2	0.2	0.29	10.8	0.0	1.7	2	0	0	2	2	2	0	Type	I	restriction	enzyme	R	protein	N	terminus	(HSDR_N)
PaREP1	PF05942.6	gi|15922333|ref|NP_378002.1|	-	1.7e-28	98.8	0.0	2.1e-28	98.4	0.0	1.1	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
HTH_23	PF13384.1	gi|15922334|ref|NP_378003.1|	-	8.6e-09	34.7	0.1	1.1e-08	34.4	0.0	1.2	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.1	gi|15922334|ref|NP_378003.1|	-	1.1e-07	31.7	0.0	1.6e-07	31.2	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
Terminase_5	PF06056.7	gi|15922334|ref|NP_378003.1|	-	7.1e-07	28.6	0.0	8.9e-07	28.3	0.0	1.2	1	0	0	1	1	1	1	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_38	PF13936.1	gi|15922334|ref|NP_378003.1|	-	6.6e-06	25.5	0.0	8.8e-06	25.1	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
Zn_Tnp_IS1	PF03811.8	gi|15922334|ref|NP_378003.1|	-	6.4e-05	22.3	6.4	6.4e-05	22.3	4.4	1.7	2	0	0	2	2	1	1	InsA	N-terminal	domain
Sigma70_r4_2	PF08281.7	gi|15922334|ref|NP_378003.1|	-	0.00011	21.5	0.0	0.00017	21.0	0.0	1.2	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_29	PF13551.1	gi|15922334|ref|NP_378003.1|	-	0.00016	21.8	0.0	0.0002	21.4	0.0	1.2	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_Tnp_1	PF01527.15	gi|15922334|ref|NP_378003.1|	-	0.0036	17.2	0.0	0.005	16.7	0.0	1.2	1	0	0	1	1	1	1	Transposase
HTH_Tnp_IS630	PF01710.11	gi|15922334|ref|NP_378003.1|	-	0.0038	16.8	0.1	0.0049	16.5	0.0	1.1	1	0	0	1	1	1	1	Transposase
HTH_Tnp_ISL3	PF13542.1	gi|15922334|ref|NP_378003.1|	-	0.0056	15.8	0.0	0.0084	15.2	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain	of	transposase	family	ISL3
Zn_Tnp_IS1595	PF12760.2	gi|15922334|ref|NP_378003.1|	-	0.0059	16.3	4.2	0.0092	15.7	2.9	1.3	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|15922334|ref|NP_378003.1|	-	0.023	14.3	1.5	0.04	13.5	1.0	1.3	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
HTH_40	PF14493.1	gi|15922334|ref|NP_378003.1|	-	0.025	14.8	0.0	0.032	14.4	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
DZR	PF12773.2	gi|15922334|ref|NP_378003.1|	-	0.031	14.0	3.1	1.1	9.1	2.2	2.1	1	1	0	1	1	1	0	Double	zinc	ribbon
CENP-B_N	PF04218.8	gi|15922334|ref|NP_378003.1|	-	0.031	13.6	0.0	0.046	13.1	0.0	1.3	1	0	0	1	1	1	0	CENP-B	N-terminal	DNA-binding	domain
GerE	PF00196.14	gi|15922334|ref|NP_378003.1|	-	0.043	13.1	0.0	0.059	12.6	0.0	1.2	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
HTH_Tnp_IS1	PF12759.2	gi|15922334|ref|NP_378003.1|	-	0.05	13.0	0.0	0.068	12.6	0.0	1.2	1	0	0	1	1	1	0	InsA	C-terminal	domain
zf-trcl	PF13451.1	gi|15922334|ref|NP_378003.1|	-	0.082	12.5	1.5	1.3	8.6	0.0	2.3	2	0	0	2	2	2	0	Probable	zinc-binding	domain
Elf1	PF05129.8	gi|15922334|ref|NP_378003.1|	-	0.084	12.5	0.4	0.14	11.8	0.2	1.4	1	0	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
Lar_restr_allev	PF14354.1	gi|15922334|ref|NP_378003.1|	-	0.087	13.1	0.5	0.15	12.3	0.4	1.4	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
Zn-ribbon_8	PF09723.5	gi|15922334|ref|NP_378003.1|	-	0.11	12.5	5.6	1.7	8.6	0.9	2.7	2	1	0	2	2	2	0	Zinc	ribbon	domain
FYVE	PF01363.16	gi|15922334|ref|NP_378003.1|	-	0.17	11.8	3.0	0.23	11.3	2.1	1.4	1	1	0	1	1	1	0	FYVE	zinc	finger
DUF35_N	PF12172.3	gi|15922334|ref|NP_378003.1|	-	0.17	11.8	1.7	11	6.0	0.0	2.5	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-ISL3	PF14690.1	gi|15922334|ref|NP_378003.1|	-	0.24	11.4	11.6	3.2	7.8	1.8	2.9	1	1	2	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
HypA	PF01155.14	gi|15922334|ref|NP_378003.1|	-	0.31	10.7	1.6	7.8	6.2	0.2	2.3	1	1	1	2	2	2	0	Hydrogenase	expression/synthesis	hypA	family
zf-ribbon_3	PF13248.1	gi|15922334|ref|NP_378003.1|	-	0.37	10.0	5.8	10	5.4	2.4	3.0	2	1	0	2	2	2	0	zinc-ribbon	domain
Nudix_N_2	PF14803.1	gi|15922334|ref|NP_378003.1|	-	0.79	9.4	6.6	2.1	8.0	4.5	1.9	1	1	0	1	1	1	0	Nudix	N-terminal
DNA_ligase_ZBD	PF03119.11	gi|15922334|ref|NP_378003.1|	-	0.99	9.1	3.9	3.1	7.5	2.8	1.8	1	1	1	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-AN1	PF01428.11	gi|15922334|ref|NP_378003.1|	-	1.1	9.2	5.9	21	5.1	4.5	2.1	1	1	1	2	2	2	0	AN1-like	Zinc	finger
zf-Dof	PF02701.10	gi|15922334|ref|NP_378003.1|	-	1.1	9.1	5.5	6.7	6.7	1.4	2.7	2	2	0	2	2	2	0	Dof	domain,	zinc	finger
zf-Mss51	PF13824.1	gi|15922334|ref|NP_378003.1|	-	1.6	8.6	6.0	9.7	6.1	4.4	2.1	1	1	1	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
zinc_ribbon_2	PF13240.1	gi|15922334|ref|NP_378003.1|	-	2.3	7.8	8.3	1.5e+02	2.0	5.8	3.0	1	1	1	2	2	2	0	zinc-ribbon	domain
PaREP1	PF05942.6	gi|15922336|ref|NP_378005.1|	-	9.7e-12	44.7	4.7	1.1e-11	44.5	3.3	1.0	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
Glyco_hydro_15	PF00723.16	gi|15922338|ref|NP_378007.1|	-	3e-19	68.9	0.2	9.2e-15	54.1	0.1	2.9	2	1	1	3	3	3	2	Glycosyl	hydrolases	family	15
Glucodextran_N	PF09137.6	gi|15922338|ref|NP_378007.1|	-	0.00014	21.2	0.0	0.00022	20.5	0.0	1.2	1	0	0	1	1	1	1	Glucodextranase,	domain	N
TetR	PF13972.1	gi|15922338|ref|NP_378007.1|	-	0.032	13.6	0.1	0.073	12.5	0.1	1.5	1	0	0	1	1	1	0	Bacterial	transcriptional	repressor
Nitro_FeMo-Co	PF02579.12	gi|15922339|ref|NP_378008.1|	-	1.9e-13	50.2	0.1	3e-13	49.6	0.1	1.3	1	0	0	1	1	1	1	Dinitrogenase	iron-molybdenum	cofactor
AMP-binding	PF00501.23	gi|15922340|ref|NP_378009.1|	-	1.6e-88	296.9	0.0	2e-88	296.6	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|15922340|ref|NP_378009.1|	-	1.2e-23	83.8	0.3	2.5e-23	82.8	0.2	1.6	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
Scm3	PF10384.4	gi|15922340|ref|NP_378009.1|	-	0.066	12.7	0.1	13	5.3	0.0	2.4	2	0	0	2	2	2	0	Centromere	protein	Scm3
Glyco_tranf_2_3	PF13641.1	gi|15922341|ref|NP_378010.1|	-	1.2e-18	67.7	0.0	1.7e-18	67.2	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glycos_transf_2	PF00535.21	gi|15922341|ref|NP_378010.1|	-	1.1e-16	60.9	0.2	1.8e-16	60.3	0.2	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_trans_2_3	PF13632.1	gi|15922341|ref|NP_378010.1|	-	1.6e-11	44.2	1.0	1.6e-11	44.2	0.7	2.2	2	1	0	2	2	2	1	Glycosyl	transferase	family	group	2
Glyco_transf_21	PF13506.1	gi|15922341|ref|NP_378010.1|	-	4.6e-08	32.5	0.0	1.1e-07	31.2	0.0	1.5	1	1	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_tranf_2_2	PF10111.4	gi|15922341|ref|NP_378010.1|	-	3.6e-06	26.2	0.0	5.1e-06	25.7	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Osmo_MPGsynth	PF09488.5	gi|15922341|ref|NP_378010.1|	-	0.056	12.1	0.0	1.3	7.6	0.0	2.1	2	0	0	2	2	2	0	Mannosyl-3-phosphoglycerate	synthase	(osmo_MPGsynth)
Lactamase_B	PF00753.22	gi|15922342|ref|NP_378011.1|	-	1e-26	93.8	1.1	1.2e-26	93.5	0.8	1.0	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|15922342|ref|NP_378011.1|	-	1.8e-05	24.3	0.0	2.1e-05	24.1	0.0	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
PDEase_II	PF02112.10	gi|15922342|ref|NP_378011.1|	-	0.14	11.0	0.1	0.19	10.6	0.1	1.2	1	0	0	1	1	1	0	cAMP	phosphodiesterases	class-II
Lyase_1	PF00206.15	gi|15922343|ref|NP_378012.1|	-	2.3e-103	345.6	0.1	2.8e-103	345.3	0.1	1.1	1	0	0	1	1	1	1	Lyase
FumaraseC_C	PF10415.4	gi|15922343|ref|NP_378012.1|	-	3.5e-13	49.4	0.0	2e-12	46.9	0.0	2.3	2	0	0	2	2	2	1	Fumarase	C	C-terminus
RuvA_C	PF07499.8	gi|15922343|ref|NP_378012.1|	-	0.077	13.1	0.0	0.43	10.7	0.0	2.3	2	0	0	2	2	2	0	RuvA,	C-terminal	domain
NUDIX	PF00293.23	gi|15922344|ref|NP_378013.1|	-	8.9e-15	54.5	0.0	1.1e-14	54.1	0.0	1.1	1	0	0	1	1	1	1	NUDIX	domain
NUDIX_4	PF14815.1	gi|15922344|ref|NP_378013.1|	-	5.4e-05	22.5	0.0	6.9e-05	22.2	0.0	1.2	1	0	0	1	1	1	1	NUDIX	domain
Esterase	PF00756.15	gi|15922346|ref|NP_378015.1|	-	1.1e-13	51.1	0.0	2.5e-13	50.0	0.0	1.6	1	1	0	1	1	1	1	Putative	esterase
Abhydrolase_1	PF00561.15	gi|15922346|ref|NP_378015.1|	-	0.013	15.0	0.0	0.021	14.3	0.0	1.4	1	0	0	1	1	1	0	alpha/beta	hydrolase	fold
Abhydrolase_5	PF12695.2	gi|15922346|ref|NP_378015.1|	-	0.034	13.9	0.0	0.044	13.5	0.0	1.3	1	0	0	1	1	1	0	Alpha/beta	hydrolase	family
Abhydrolase_2	PF02230.11	gi|15922346|ref|NP_378015.1|	-	0.12	11.7	0.1	2.5	7.4	0.0	2.3	2	0	0	2	2	2	0	Phospholipase/Carboxylesterase
Na_H_Exchanger	PF00999.16	gi|15922347|ref|NP_378016.1|	-	2.2e-26	92.3	48.1	2.2e-26	92.3	33.4	2.1	2	0	0	2	2	2	1	Sodium/hydrogen	exchanger	family
DUF429	PF04250.8	gi|15922348|ref|NP_378017.1|	-	2.4e-17	62.8	0.0	2.8e-15	56.1	0.0	2.1	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF429)
TIM	PF00121.13	gi|15922349|ref|NP_378018.1|	-	7.6e-26	90.6	1.2	1.5e-19	70.0	0.0	2.0	1	1	1	2	2	2	2	Triosephosphate	isomerase
ThiG	PF05690.9	gi|15922349|ref|NP_378018.1|	-	1.2e-05	24.4	2.1	1.6e-05	24.0	0.4	1.8	2	0	0	2	2	2	1	Thiazole	biosynthesis	protein	ThiG
PcrB	PF01884.12	gi|15922349|ref|NP_378018.1|	-	2.2e-05	23.8	2.7	0.00011	21.5	0.6	2.2	2	0	0	2	2	2	1	PcrB	family
FMN_dh	PF01070.13	gi|15922349|ref|NP_378018.1|	-	0.00014	20.8	0.1	0.00022	20.1	0.1	1.2	1	0	0	1	1	1	1	FMN-dependent	dehydrogenase
Trp_syntA	PF00290.15	gi|15922349|ref|NP_378018.1|	-	0.00029	19.4	1.2	0.0005	18.6	0.2	1.8	2	0	0	2	2	2	1	Tryptophan	synthase	alpha	chain
Glu_synthase	PF01645.12	gi|15922349|ref|NP_378018.1|	-	0.00044	19.2	0.1	0.00088	18.2	0.1	1.4	1	0	0	1	1	1	1	Conserved	region	in	glutamate	synthase
IGPS	PF00218.16	gi|15922349|ref|NP_378018.1|	-	0.0014	17.6	0.0	0.0022	17.0	0.0	1.3	1	0	0	1	1	1	1	Indole-3-glycerol	phosphate	synthase
NMO	PF03060.10	gi|15922349|ref|NP_378018.1|	-	0.0015	17.7	0.1	0.0022	17.1	0.1	1.3	1	0	0	1	1	1	1	Nitronate	monooxygenase
His_biosynth	PF00977.16	gi|15922349|ref|NP_378018.1|	-	0.0019	17.5	2.0	0.0029	16.8	0.3	2.0	3	0	0	3	3	3	1	Histidine	biosynthesis	protein
DHO_dh	PF01180.16	gi|15922349|ref|NP_378018.1|	-	0.0074	15.2	0.1	0.011	14.7	0.1	1.4	1	0	0	1	1	1	1	Dihydroorotate	dehydrogenase
DUF561	PF04481.7	gi|15922349|ref|NP_378018.1|	-	0.0098	14.8	1.2	0.024	13.5	0.1	2.0	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF561)
NanE	PF04131.9	gi|15922349|ref|NP_378018.1|	-	0.021	13.8	0.0	0.038	12.9	0.0	1.5	1	0	0	1	1	1	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
IMPDH	PF00478.20	gi|15922349|ref|NP_378018.1|	-	0.051	12.4	0.2	0.075	11.9	0.2	1.2	1	0	0	1	1	1	0	IMP	dehydrogenase	/	GMP	reductase	domain
SHP	PF03579.8	gi|15922350|ref|NP_378019.1|	-	1.1	8.6	5.3	1.7	8.0	1.1	2.7	1	1	2	3	3	3	0	Small	hydrophobic	protein
BPD_transp_1	PF00528.17	gi|15922352|ref|NP_378021.1|	-	2.7e-14	53.1	13.7	2.7e-14	53.1	9.5	2.4	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
SBP_bac_11	PF13531.1	gi|15922353|ref|NP_378022.1|	-	2e-26	93.0	0.1	2.9e-26	92.5	0.0	1.2	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_1	PF01547.20	gi|15922353|ref|NP_378022.1|	-	2e-10	40.8	7.8	3.1e-10	40.3	5.4	1.2	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_8	PF13416.1	gi|15922353|ref|NP_378022.1|	-	3.3e-05	23.7	6.9	0.016	14.9	4.7	2.6	1	1	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
IL17_R_N	PF15037.1	gi|15922353|ref|NP_378022.1|	-	0.19	10.7	0.0	0.32	9.9	0.0	1.3	1	0	0	1	1	1	0	Interleukin-17	receptor	extracellular	region
Shisa	PF13908.1	gi|15922353|ref|NP_378022.1|	-	3.7	7.6	5.9	0.44	10.6	0.6	1.9	2	0	0	2	2	2	0	Wnt	and	FGF	inhibitory	regulator
ABC_tran	PF00005.22	gi|15922354|ref|NP_378023.1|	-	1.5e-23	83.5	0.2	2.6e-23	82.8	0.1	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|15922354|ref|NP_378023.1|	-	1.6e-10	41.4	5.3	6.6e-09	36.1	3.7	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.1	gi|15922354|ref|NP_378023.1|	-	4.6e-05	23.8	10.5	8.7e-05	22.9	7.2	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|15922354|ref|NP_378023.1|	-	0.00013	21.5	2.8	0.02	14.3	0.0	2.1	2	0	0	2	2	2	2	AAA-like	domain
T2SE	PF00437.15	gi|15922354|ref|NP_378023.1|	-	0.00071	18.5	0.5	0.0011	17.9	0.1	1.6	1	1	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_29	PF13555.1	gi|15922354|ref|NP_378023.1|	-	0.0024	17.3	0.1	0.0048	16.3	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.1	gi|15922354|ref|NP_378023.1|	-	0.0074	16.4	1.9	0.041	14.0	1.3	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|15922354|ref|NP_378023.1|	-	0.0075	16.1	0.3	0.057	13.3	0.2	2.1	1	1	0	1	1	1	1	AAA	domain
Pox_A32	PF04665.7	gi|15922354|ref|NP_378023.1|	-	0.008	15.5	3.5	0.044	13.0	0.1	2.2	2	1	0	2	2	2	1	Poxvirus	A32	protein
SMC_N	PF02463.14	gi|15922354|ref|NP_378023.1|	-	0.0086	15.3	0.4	0.02	14.1	0.1	1.7	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
AAA_17	PF13207.1	gi|15922354|ref|NP_378023.1|	-	0.0097	16.7	0.9	0.017	15.9	0.6	1.7	1	1	0	1	1	1	1	AAA	domain
Zot	PF05707.7	gi|15922354|ref|NP_378023.1|	-	0.016	14.6	1.1	0.31	10.4	0.8	2.1	1	1	0	1	1	1	0	Zonular	occludens	toxin	(Zot)
DUF927	PF06048.6	gi|15922354|ref|NP_378023.1|	-	0.019	14.2	0.3	5.2	6.2	0.0	2.4	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF927)
Zeta_toxin	PF06414.7	gi|15922354|ref|NP_378023.1|	-	0.023	13.8	0.3	0.95	8.5	0.0	2.1	2	0	0	2	2	2	0	Zeta	toxin
AAA_18	PF13238.1	gi|15922354|ref|NP_378023.1|	-	0.024	14.9	2.3	0.047	14.0	1.6	1.6	1	1	0	1	1	1	0	AAA	domain
MobB	PF03205.9	gi|15922354|ref|NP_378023.1|	-	0.027	14.1	1.2	0.085	12.5	0.2	2.1	2	1	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Miro	PF08477.8	gi|15922354|ref|NP_378023.1|	-	0.034	14.6	0.5	0.056	13.9	0.4	1.8	1	1	0	1	1	1	0	Miro-like	protein
AAA_13	PF13166.1	gi|15922354|ref|NP_378023.1|	-	0.037	12.4	2.5	0.2	10.0	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
NACHT	PF05729.7	gi|15922354|ref|NP_378023.1|	-	0.037	13.6	0.1	0.061	12.9	0.1	1.3	1	0	0	1	1	1	0	NACHT	domain
ATP_bind_1	PF03029.12	gi|15922354|ref|NP_378023.1|	-	0.058	12.9	0.2	0.19	11.2	0.0	1.8	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
AAA_24	PF13479.1	gi|15922354|ref|NP_378023.1|	-	0.082	12.4	0.4	0.13	11.7	0.2	1.6	1	1	0	1	1	1	0	AAA	domain
AAA_15	PF13175.1	gi|15922354|ref|NP_378023.1|	-	0.87	8.5	19.3	0.17	10.9	8.2	2.0	1	1	1	2	2	2	0	AAA	ATPase	domain
DUF4147	PF13660.1	gi|15922355|ref|NP_378024.1|	-	5.3e-52	176.3	0.0	7.1e-52	175.9	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4147)
MOFRL	PF05161.8	gi|15922355|ref|NP_378024.1|	-	4.5e-25	87.8	0.0	9.1e-25	86.8	0.0	1.6	1	0	0	1	1	1	1	MOFRL	family
DUF2250	PF10007.4	gi|15922356|ref|NP_378025.1|	-	4.9e-07	29.5	0.4	1.5e-06	28.0	0.3	1.8	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_36	PF13730.1	gi|15922356|ref|NP_378025.1|	-	0.0049	16.9	0.1	0.021	14.9	0.0	2.1	2	1	0	2	2	2	1	Helix-turn-helix	domain
DUF2513	PF10711.4	gi|15922356|ref|NP_378025.1|	-	0.015	15.3	0.0	0.024	14.7	0.0	1.5	1	1	0	1	1	1	0	Hypothetical	protein	(DUF2513)
HxlR	PF01638.12	gi|15922356|ref|NP_378025.1|	-	0.095	12.3	0.1	1.2	8.8	0.0	2.4	2	1	0	2	2	2	0	HxlR-like	helix-turn-helix
Fe_dep_repr_C	PF02742.10	gi|15922357|ref|NP_378026.1|	-	2.6e-28	97.4	0.3	4.9e-28	96.6	0.2	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
Fe_dep_repress	PF01325.14	gi|15922357|ref|NP_378026.1|	-	1.4e-11	44.1	0.7	6.3e-11	42.0	0.1	2.4	3	0	0	3	3	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_45	PF14947.1	gi|15922357|ref|NP_378026.1|	-	4.6e-07	29.5	0.5	4.6e-07	29.5	0.3	1.9	2	0	0	2	2	2	1	Winged	helix-turn-helix
FeoA	PF04023.9	gi|15922357|ref|NP_378026.1|	-	5.9e-07	29.3	0.0	1.3e-06	28.2	0.0	1.6	1	0	0	1	1	1	1	FeoA	domain
MarR	PF01047.17	gi|15922357|ref|NP_378026.1|	-	3.2e-06	26.7	0.0	9.7e-06	25.2	0.0	1.9	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.2	gi|15922357|ref|NP_378026.1|	-	1e-05	25.1	0.0	2.9e-05	23.6	0.0	1.7	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.1	gi|15922357|ref|NP_378026.1|	-	6.6e-05	23.1	0.0	0.00014	22.0	0.0	1.6	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_5	PF01022.15	gi|15922357|ref|NP_378026.1|	-	9.5e-05	21.9	0.0	0.0002	20.9	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
GntR	PF00392.16	gi|15922357|ref|NP_378026.1|	-	0.0002	20.7	0.0	0.00078	18.8	0.0	2.0	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HTH_24	PF13412.1	gi|15922357|ref|NP_378026.1|	-	0.00024	20.4	0.1	0.00076	18.8	0.1	2.0	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_Crp_2	PF13545.1	gi|15922357|ref|NP_378026.1|	-	0.00036	20.2	0.0	0.0012	18.5	0.0	1.9	2	0	0	2	2	1	1	Crp-like	helix-turn-helix	domain
DUF2250	PF10007.4	gi|15922357|ref|NP_378026.1|	-	0.00042	20.1	0.2	0.001	18.9	0.2	1.7	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_41	PF14502.1	gi|15922357|ref|NP_378026.1|	-	0.00066	19.2	0.0	0.0015	18.0	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|15922357|ref|NP_378026.1|	-	0.00067	19.3	0.3	0.0014	18.2	0.2	1.6	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HemN_C	PF06969.11	gi|15922357|ref|NP_378026.1|	-	0.0011	19.0	0.0	0.0043	17.0	0.0	2.0	1	0	0	1	1	1	1	HemN	C-terminal	domain
HTH_DeoR	PF08220.7	gi|15922357|ref|NP_378026.1|	-	0.0023	17.4	0.0	0.0047	16.4	0.0	1.5	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
DUF4423	PF14394.1	gi|15922357|ref|NP_378026.1|	-	0.0039	16.7	0.4	0.0094	15.5	0.1	1.8	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4423)
HTH_1	PF00126.22	gi|15922357|ref|NP_378026.1|	-	0.0043	16.7	0.0	0.013	15.2	0.0	1.8	1	0	0	1	1	1	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
FeoC	PF09012.5	gi|15922357|ref|NP_378026.1|	-	0.0067	16.1	0.0	0.012	15.2	0.0	1.5	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
Phage_rep_org_N	PF09681.5	gi|15922357|ref|NP_378026.1|	-	0.0085	15.6	0.2	0.02	14.4	0.0	1.7	2	0	0	2	2	2	1	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
HTH_20	PF12840.2	gi|15922357|ref|NP_378026.1|	-	0.016	15.0	0.0	0.043	13.6	0.0	1.8	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|15922357|ref|NP_378026.1|	-	0.02	14.5	0.1	0.086	12.4	0.0	2.3	1	1	0	1	1	1	0	HTH	domain
AAA_assoc_C	PF09821.4	gi|15922357|ref|NP_378026.1|	-	0.021	15.0	0.1	0.04	14.1	0.1	1.5	1	0	0	1	1	1	0	C-terminal	AAA-associated	domain
B-block_TFIIIC	PF04182.7	gi|15922357|ref|NP_378026.1|	-	0.023	14.5	0.0	0.051	13.4	0.0	1.6	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
Ribosomal_S19e	PF01090.14	gi|15922357|ref|NP_378026.1|	-	0.036	13.4	0.1	0.069	12.5	0.0	1.4	1	0	0	1	1	1	0	Ribosomal	protein	S19e
LexA_DNA_bind	PF01726.11	gi|15922357|ref|NP_378026.1|	-	0.07	12.6	0.0	0.21	11.1	0.0	1.8	1	0	0	1	1	1	0	LexA	DNA	binding	domain
HxlR	PF01638.12	gi|15922357|ref|NP_378026.1|	-	0.08	12.5	0.0	0.22	11.1	0.0	1.8	1	1	0	1	1	1	0	HxlR-like	helix-turn-helix
PadR	PF03551.9	gi|15922357|ref|NP_378026.1|	-	0.084	12.6	0.0	0.19	11.5	0.0	1.7	1	1	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
GTP_EFTU_D4	PF14578.1	gi|15922357|ref|NP_378026.1|	-	0.094	12.3	0.7	4.7	6.9	0.0	2.4	2	0	0	2	2	2	0	Elongation	factor	Tu	domain	4
EAP30	PF04157.11	gi|15922357|ref|NP_378026.1|	-	0.12	11.5	0.0	1.5	7.8	0.0	2.1	2	0	0	2	2	2	0	EAP30/Vps36	family
DUF456	PF04306.8	gi|15922358|ref|NP_378027.1|	-	0.0024	17.9	2.8	0.0032	17.5	2.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF456)
HTH_36	PF13730.1	gi|15922358|ref|NP_378027.1|	-	0.012	15.6	0.0	6.6	6.9	0.0	2.3	2	0	0	2	2	2	0	Helix-turn-helix	domain
Rick_17kDa_Anti	PF05433.10	gi|15922358|ref|NP_378027.1|	-	0.14	11.8	11.6	0.24	11.1	8.1	1.3	1	0	0	1	1	1	0	Glycine	zipper	2TM	domain
Gly-zipper_Omp	PF13488.1	gi|15922358|ref|NP_378027.1|	-	0.22	11.1	8.5	0.34	10.5	5.9	1.3	1	0	0	1	1	1	0	Glycine	zipper
Bacteriocin_IIc	PF10439.4	gi|15922358|ref|NP_378027.1|	-	0.25	11.5	4.2	0.38	10.8	2.9	1.3	1	0	0	1	1	1	0	Bacteriocin	class	II	with	double-glycine	leader	peptide
Gly-zipper_YMGG	PF13441.1	gi|15922358|ref|NP_378027.1|	-	2	7.9	9.7	3.7	7.1	6.7	1.5	1	1	0	1	1	1	0	YMGG-like	Gly-zipper
DUF1003	PF06210.6	gi|15922359|ref|NP_378028.1|	-	0.11	12.4	0.7	0.11	12.4	0.5	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1003)
Methyltransf_11	PF08241.7	gi|15922360|ref|NP_378029.1|	-	5.3e-16	58.8	0.0	7.9e-16	58.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|15922360|ref|NP_378029.1|	-	2.1e-08	33.5	0.0	3.3e-08	32.9	0.0	1.4	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_23	PF13489.1	gi|15922360|ref|NP_378029.1|	-	2.1e-07	30.8	0.0	3.7e-07	30.0	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|15922360|ref|NP_378029.1|	-	2.2e-07	31.2	0.0	3.8e-07	30.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|15922360|ref|NP_378029.1|	-	2.5e-07	30.4	0.2	3.4e-07	29.9	0.1	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_8	PF05148.10	gi|15922360|ref|NP_378029.1|	-	0.0002	21.0	0.1	0.00032	20.3	0.0	1.4	1	0	0	1	1	1	1	Hypothetical	methyltransferase
Methyltransf_25	PF13649.1	gi|15922360|ref|NP_378029.1|	-	0.00026	21.2	0.0	0.0015	18.8	0.0	2.0	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|15922360|ref|NP_378029.1|	-	0.0033	18.0	0.0	0.011	16.2	0.0	1.9	2	0	0	2	2	2	1	Methyltransferase	domain
CBS	PF00571.23	gi|15922361|ref|NP_378030.1|	-	2e-16	59.4	9.5	1.5e-05	24.6	0.3	4.9	4	1	0	4	4	4	3	CBS	domain
MobB	PF03205.9	gi|15922362|ref|NP_378031.1|	-	1.1e-29	102.8	0.3	1.8e-29	102.2	0.2	1.3	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Miro	PF08477.8	gi|15922362|ref|NP_378031.1|	-	0.0025	18.3	0.1	0.0062	17.0	0.0	1.6	2	0	0	2	2	2	1	Miro-like	protein
AAA_35	PF14516.1	gi|15922362|ref|NP_378031.1|	-	0.053	12.1	0.0	0.076	11.6	0.0	1.2	1	0	0	1	1	1	0	AAA-like	domain
AAA_30	PF13604.1	gi|15922362|ref|NP_378031.1|	-	0.085	12.4	0.1	0.11	12.0	0.0	1.1	1	0	0	1	1	1	0	AAA	domain
LpxK	PF02606.9	gi|15922362|ref|NP_378031.1|	-	0.088	11.7	0.0	0.12	11.3	0.0	1.3	1	0	0	1	1	1	0	Tetraacyldisaccharide-1-P	4'-kinase
MoeA_N	PF03453.12	gi|15922363|ref|NP_378032.1|	-	3.3e-40	137.0	0.0	4.8e-40	136.5	0.0	1.2	1	0	0	1	1	1	1	MoeA	N-terminal	region	(domain	I	and	II)
MoCF_biosynth	PF00994.19	gi|15922363|ref|NP_378032.1|	-	3.3e-20	71.9	0.1	6.2e-20	71.0	0.1	1.4	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
SynMuv_product	PF06047.6	gi|15922363|ref|NP_378032.1|	-	0.11	12.2	0.4	0.5	10.1	0.0	2.4	3	0	0	3	3	3	0	Ras-induced	vulval	development	antagonist
7TMR-HDED	PF07697.6	gi|15922363|ref|NP_378032.1|	-	0.18	11.5	0.1	0.34	10.6	0.1	1.3	1	0	0	1	1	1	0	7TM-HD	extracellular
NTP_transf_3	PF12804.2	gi|15922364|ref|NP_378033.1|	-	3.2e-18	66.3	0.0	4.1e-18	65.9	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Methyltransf_31	PF13847.1	gi|15922365|ref|NP_378034.1|	-	4e-05	23.2	0.1	4.8e-05	22.9	0.1	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
DOT1	PF08123.8	gi|15922365|ref|NP_378034.1|	-	0.00023	20.5	0.0	0.00055	19.3	0.0	1.5	2	0	0	2	2	2	1	Histone	methylation	protein	DOT1
Methyltransf_26	PF13659.1	gi|15922365|ref|NP_378034.1|	-	0.00058	19.8	0.0	0.00081	19.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|15922365|ref|NP_378034.1|	-	0.0011	18.0	0.0	0.0014	17.6	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_25	PF13649.1	gi|15922365|ref|NP_378034.1|	-	0.004	17.5	0.0	0.0068	16.7	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|15922365|ref|NP_378034.1|	-	0.0058	17.1	0.0	0.0083	16.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_4	PF02390.12	gi|15922365|ref|NP_378034.1|	-	0.0065	15.5	0.0	0.0087	15.1	0.0	1.2	1	0	0	1	1	1	1	Putative	methyltransferase
Methyltransf_11	PF08241.7	gi|15922365|ref|NP_378034.1|	-	0.027	14.9	0.0	0.043	14.3	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
MetW	PF07021.7	gi|15922365|ref|NP_378034.1|	-	0.027	13.8	0.1	0.22	10.8	0.1	2.0	2	0	0	2	2	2	0	Methionine	biosynthesis	protein	MetW
PrmA	PF06325.8	gi|15922365|ref|NP_378034.1|	-	0.15	11.1	0.1	0.18	10.8	0.1	1.1	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
ATP_bind_4	PF01902.12	gi|15922366|ref|NP_378035.1|	-	7.9e-61	205.2	0.1	8.7e-61	205.0	0.1	1.0	1	0	0	1	1	1	1	ATP-binding	region
QueC	PF06508.8	gi|15922366|ref|NP_378035.1|	-	0.0087	15.3	0.0	0.048	12.9	0.0	2.2	3	0	0	3	3	3	1	Queuosine	biosynthesis	protein	QueC
ThiI	PF02568.9	gi|15922366|ref|NP_378035.1|	-	0.014	14.9	0.0	3.6	6.9	0.0	2.3	2	0	0	2	2	2	0	Thiamine	biosynthesis	protein	(ThiI)
Amidohydro_1	PF01979.15	gi|15922367|ref|NP_378036.1|	-	2.5e-31	109.5	0.0	3.6e-31	109.0	0.0	1.2	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|15922367|ref|NP_378036.1|	-	8.5e-10	38.3	0.0	2.2e-09	37.0	0.0	1.7	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_4	PF13147.1	gi|15922367|ref|NP_378036.1|	-	9.2e-08	32.4	0.0	0.0041	17.1	0.0	2.2	2	0	0	2	2	2	2	Amidohydrolase
A_deaminase	PF00962.17	gi|15922367|ref|NP_378036.1|	-	2.5e-05	23.3	0.0	4.4e-05	22.5	0.0	1.3	1	0	0	1	1	1	1	Adenosine/AMP	deaminase
Amidohydro_3	PF07969.6	gi|15922367|ref|NP_378036.1|	-	7.8e-05	22.0	0.2	0.0076	15.5	0.0	2.4	2	1	0	2	2	2	2	Amidohydrolase	family
TrmB	PF01978.14	gi|15922368|ref|NP_378037.1|	-	1e-15	57.1	0.1	1.4e-15	56.7	0.1	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|15922368|ref|NP_378037.1|	-	1.3e-08	34.3	0.0	2e-08	33.7	0.0	1.3	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.17	gi|15922368|ref|NP_378037.1|	-	1.4e-06	27.8	0.1	2.5e-06	27.0	0.1	1.3	1	0	0	1	1	1	1	MarR	family
HTH_5	PF01022.15	gi|15922368|ref|NP_378037.1|	-	2.7e-06	26.9	0.8	5.4e-06	25.9	0.2	1.8	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_27	PF13463.1	gi|15922368|ref|NP_378037.1|	-	5.4e-05	23.4	0.0	8.3e-05	22.8	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
TFIIE_alpha	PF02002.12	gi|15922368|ref|NP_378037.1|	-	6.4e-05	22.4	0.1	7.9e-05	22.1	0.1	1.2	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HTH_24	PF13412.1	gi|15922368|ref|NP_378037.1|	-	0.0011	18.3	0.5	0.0026	17.1	0.3	1.7	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_20	PF12840.2	gi|15922368|ref|NP_378037.1|	-	0.0019	17.9	0.1	0.0035	17.0	0.1	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
z-alpha	PF02295.12	gi|15922368|ref|NP_378037.1|	-	0.0043	16.7	0.4	0.026	14.2	0.0	2.0	2	0	0	2	2	2	1	Adenosine	deaminase	z-alpha	domain
Fe_dep_repress	PF01325.14	gi|15922368|ref|NP_378037.1|	-	0.0072	16.2	0.1	0.013	15.4	0.0	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_36	PF13730.1	gi|15922368|ref|NP_378037.1|	-	0.044	13.9	0.2	0.093	12.8	0.1	1.7	1	1	0	1	1	1	0	Helix-turn-helix	domain
RTP	PF02334.11	gi|15922368|ref|NP_378037.1|	-	0.044	13.7	0.1	0.052	13.5	0.1	1.1	1	0	0	1	1	1	0	Replication	terminator	protein
HTH_34	PF13601.1	gi|15922368|ref|NP_378037.1|	-	0.054	13.5	0.2	0.12	12.4	0.1	1.6	1	1	1	2	2	2	0	Winged	helix	DNA-binding	domain
Replic_Relax	PF13814.1	gi|15922368|ref|NP_378037.1|	-	0.06	13.1	0.0	0.097	12.5	0.0	1.3	1	1	0	1	1	1	0	Replication-relaxation
DUF2250	PF10007.4	gi|15922368|ref|NP_378037.1|	-	0.069	13.0	0.3	0.11	12.4	0.1	1.5	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF4423	PF14394.1	gi|15922368|ref|NP_378037.1|	-	0.07	12.6	1.0	0.24	10.9	0.6	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
HTH_DeoR	PF08220.7	gi|15922368|ref|NP_378037.1|	-	0.13	11.8	0.1	0.29	10.7	0.1	1.6	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
GntR	PF00392.16	gi|15922368|ref|NP_378037.1|	-	0.13	11.7	0.1	0.83	9.1	0.0	2.0	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
HTH_IclR	PF09339.5	gi|15922368|ref|NP_378037.1|	-	0.13	11.8	0.1	0.23	11.0	0.0	1.4	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
Antitoxin-MazE	PF04014.13	gi|15922369|ref|NP_378038.1|	-	3.9e-11	42.4	0.4	4.1e-11	42.3	0.3	1.1	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
eIF-1a	PF01176.14	gi|15922369|ref|NP_378038.1|	-	0.00015	21.1	0.1	0.0002	20.7	0.1	1.3	1	1	0	1	1	1	1	Translation	initiation	factor	1A	/	IF-1
DEAD_2	PF06733.10	gi|15922369|ref|NP_378038.1|	-	0.037	13.4	0.2	0.04	13.3	0.1	1.0	1	0	0	1	1	1	0	DEAD_2
DUF1905	PF08922.6	gi|15922369|ref|NP_378038.1|	-	0.072	12.6	0.1	0.088	12.3	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1905)
RE_HaeIII	PF09556.5	gi|15922369|ref|NP_378038.1|	-	0.1	11.4	0.4	0.1	11.4	0.3	1.0	1	0	0	1	1	1	0	HaeIII	restriction	endonuclease
DUF4387	PF14330.1	gi|15922369|ref|NP_378038.1|	-	0.15	12.4	0.1	0.15	12.4	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4387)
TatD_DNase	PF01026.16	gi|15922370|ref|NP_378039.1|	-	1.1e-54	185.3	0.3	1.2e-54	185.2	0.2	1.0	1	0	0	1	1	1	1	TatD	related	DNase
ScdA_N	PF04405.9	gi|15922370|ref|NP_378039.1|	-	0.056	12.8	0.6	3.2	7.2	0.2	2.9	3	0	0	3	3	3	0	Domain	of	Unknown	function	(DUF542)
NfeD	PF01957.13	gi|15922371|ref|NP_378040.1|	-	0.15	12.2	1.0	0.15	12.2	0.7	1.0	1	0	0	1	1	1	0	NfeD-like	C-terminal,	partner-binding
COX1	PF00115.15	gi|15922373|ref|NP_378042.1|	-	1e-58	199.1	58.1	1e-58	199.1	40.3	2.6	2	1	1	3	3	3	2	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
HAD_2	PF13419.1	gi|15922375|ref|NP_378044.1|	-	5.3e-18	65.8	0.0	7.2e-18	65.4	0.0	1.2	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|15922375|ref|NP_378044.1|	-	5.1e-13	49.9	0.7	1.8e-10	41.5	0.5	2.1	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.2	gi|15922375|ref|NP_378044.1|	-	4.4e-08	33.5	0.2	6.7e-08	32.9	0.2	1.2	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.7	gi|15922375|ref|NP_378044.1|	-	0.00016	21.3	5.6	0.03	13.9	2.3	3.1	2	1	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|15922375|ref|NP_378044.1|	-	0.0095	15.6	0.0	0.096	12.4	0.0	2.1	2	0	0	2	2	2	1	HAD-hyrolase-like
Hydrolase_6	PF13344.1	gi|15922375|ref|NP_378044.1|	-	0.037	13.9	0.5	0.38	10.6	0.3	2.2	1	1	0	1	1	1	0	Haloacid	dehalogenase-like	hydrolase
ADH_zinc_N	PF00107.21	gi|15922376|ref|NP_378045.1|	-	7.3e-32	109.6	0.1	1.4e-31	108.7	0.1	1.5	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_N	PF08240.7	gi|15922376|ref|NP_378045.1|	-	5.7e-31	106.4	1.2	5.7e-31	106.4	0.8	2.1	2	0	0	2	2	2	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N_2	PF13602.1	gi|15922376|ref|NP_378045.1|	-	1.4e-07	32.4	0.1	6.6e-07	30.2	0.0	2.0	2	0	0	2	2	2	1	Zinc-binding	dehydrogenase
NAD_binding_3	PF03447.11	gi|15922376|ref|NP_378045.1|	-	0.0054	17.1	0.7	0.0096	16.3	0.5	1.4	1	0	0	1	1	1	1	Homoserine	dehydrogenase,	NAD	binding	domain
TrkA_N	PF02254.13	gi|15922376|ref|NP_378045.1|	-	0.01	15.7	0.7	0.02	14.9	0.5	1.4	1	0	0	1	1	1	0	TrkA-N	domain
2-Hacid_dh_C	PF02826.14	gi|15922376|ref|NP_378045.1|	-	0.018	14.1	0.4	0.033	13.3	0.3	1.5	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
IlvN	PF07991.7	gi|15922376|ref|NP_378045.1|	-	0.037	13.4	0.1	0.084	12.2	0.0	1.6	1	0	0	1	1	1	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
Saccharop_dh	PF03435.13	gi|15922376|ref|NP_378045.1|	-	0.067	12.1	0.6	0.12	11.3	0.4	1.4	1	0	0	1	1	1	0	Saccharopine	dehydrogenase
Shikimate_DH	PF01488.15	gi|15922376|ref|NP_378045.1|	-	0.087	12.9	0.4	0.38	10.8	0.2	2.0	2	0	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
Ldh_1_N	PF00056.18	gi|15922376|ref|NP_378045.1|	-	0.11	12.2	5.1	0.047	13.5	0.5	2.2	2	0	0	2	2	2	0	lactate/malate	dehydrogenase,	NAD	binding	domain
HTH_7	PF02796.10	gi|15922376|ref|NP_378045.1|	-	0.12	12.2	0.0	0.42	10.5	0.0	2.0	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	resolvase
Semialdhyde_dh	PF01118.19	gi|15922376|ref|NP_378045.1|	-	5.9	7.2	7.5	0.68	10.2	0.3	2.7	3	0	0	3	3	3	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
ThiF	PF00899.16	gi|15922376|ref|NP_378045.1|	-	6.5	6.5	10.3	0.38	10.5	3.0	1.9	2	0	0	2	2	2	0	ThiF	family
Glycos_transf_4	PF00953.16	gi|15922377|ref|NP_378046.1|	-	7.7e-32	110.2	20.2	7.7e-32	110.2	14.0	2.3	4	0	0	4	4	4	1	Glycosyl	transferase	family	4
polyprenyl_synt	PF00348.12	gi|15922378|ref|NP_378047.1|	-	3.8e-78	261.9	0.5	5.1e-78	261.5	0.3	1.1	1	0	0	1	1	1	1	Polyprenyl	synthetase
FMN_dh	PF01070.13	gi|15922379|ref|NP_378048.1|	-	4.2e-25	88.3	0.0	3.3e-18	65.6	0.0	2.1	1	1	1	2	2	2	2	FMN-dependent	dehydrogenase
IMPDH	PF00478.20	gi|15922379|ref|NP_378048.1|	-	6.1e-07	28.6	2.4	0.00057	18.8	0.7	3.2	3	0	0	3	3	3	3	IMP	dehydrogenase	/	GMP	reductase	domain
Glu_synthase	PF01645.12	gi|15922379|ref|NP_378048.1|	-	0.0029	16.5	1.1	0.0046	15.9	0.1	1.7	2	0	0	2	2	2	1	Conserved	region	in	glutamate	synthase
Ubiq-assoc	PF09145.5	gi|15922379|ref|NP_378048.1|	-	0.11	12.3	0.8	1.7	8.5	0.0	2.8	3	0	0	3	3	3	0	Ubiquitin-associated
Memo	PF01875.12	gi|15922382|ref|NP_378051.1|	-	1.5e-87	292.9	0.1	1.7e-87	292.8	0.1	1.0	1	0	0	1	1	1	1	Memo-like	protein
Thioredoxin_6	PF13848.1	gi|15922382|ref|NP_378051.1|	-	0.0029	17.4	0.1	0.0055	16.5	0.1	1.5	1	0	0	1	1	1	1	Thioredoxin-like	domain
RdRP_2	PF00978.16	gi|15922382|ref|NP_378051.1|	-	0.046	12.4	0.7	0.061	12.0	0.5	1.1	1	0	0	1	1	1	0	RNA	dependent	RNA	polymerase
Ribosomal_S2	PF00318.15	gi|15922383|ref|NP_378052.1|	-	4.1e-40	137.2	0.0	6.7e-21	74.4	0.0	2.1	1	1	1	2	2	2	2	Ribosomal	protein	S2
Peripla_BP_4	PF13407.1	gi|15922383|ref|NP_378052.1|	-	0.27	10.5	0.8	0.38	10.0	0.6	1.1	1	0	0	1	1	1	0	Periplasmic	binding	protein	domain
RNA_pol_N	PF01194.12	gi|15922384|ref|NP_378053.1|	-	3.8e-32	110.0	0.3	4.2e-32	109.9	0.2	1.0	1	0	0	1	1	1	1	RNA	polymerases	N	/	8	kDa	subunit
Chordopox_RPO7	PF05864.7	gi|15922384|ref|NP_378053.1|	-	0.095	12.8	0.4	0.18	11.8	0.3	1.5	1	1	0	1	1	1	0	Chordopoxvirus	DNA-directed	RNA	polymerase	7	kDa	polypeptide	(RPO7)
Ribosomal_S9	PF00380.14	gi|15922385|ref|NP_378054.1|	-	3.1e-29	101.6	0.1	3.6e-29	101.4	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S9/S16
Ribosomal_L13	PF00572.13	gi|15922386|ref|NP_378055.1|	-	5.1e-29	100.9	0.5	6.4e-29	100.6	0.4	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L13
Ribosomal_L18e	PF00828.14	gi|15922387|ref|NP_378056.1|	-	1.4e-17	64.3	0.3	1.7e-17	64.0	0.2	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L18e/L15
DUF3354	PF11834.3	gi|15922387|ref|NP_378056.1|	-	0.061	12.9	0.1	0.12	12.0	0.1	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3354)
Transcrip_act	PF04949.8	gi|15922387|ref|NP_378056.1|	-	0.2	11.2	1.3	2	8.0	0.1	2.1	1	1	1	2	2	2	0	Transcriptional	activator
RNA_pol_A_bac	PF01000.21	gi|15922388|ref|NP_378057.1|	-	4.5e-26	91.2	0.0	9.9e-26	90.0	0.0	1.6	2	0	0	2	2	2	1	RNA	polymerase	Rpb3/RpoA	insert	domain
RNA_pol_L	PF01193.19	gi|15922388|ref|NP_378057.1|	-	5.2e-09	35.0	0.0	6.3e-09	34.8	0.0	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
Fer4_9	PF13187.1	gi|15922388|ref|NP_378057.1|	-	0.00012	22.3	10.8	0.00026	21.1	3.8	2.3	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|15922388|ref|NP_378057.1|	-	0.0077	16.6	7.1	0.12	12.7	3.2	2.5	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|15922388|ref|NP_378057.1|	-	0.22	11.3	11.4	0.085	12.6	1.0	2.7	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|15922388|ref|NP_378057.1|	-	1.4	8.9	9.1	38	4.4	0.0	2.6	2	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Ribosomal_S11	PF00411.14	gi|15922389|ref|NP_378058.1|	-	1.3e-43	147.6	0.4	1.5e-43	147.3	0.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S11
S4	PF01479.20	gi|15922390|ref|NP_378059.1|	-	2.8e-16	58.6	0.2	5.8e-16	57.6	0.1	1.5	1	0	0	1	1	1	1	S4	domain
Ribosomal_S4	PF00163.14	gi|15922390|ref|NP_378059.1|	-	0.012	15.9	1.8	0.016	15.5	0.5	1.7	1	1	1	2	2	2	0	Ribosomal	protein	S4/S9	N-terminal	domain
Ribosomal_S13	PF00416.17	gi|15922391|ref|NP_378060.1|	-	4.8e-37	126.6	0.2	6.7e-37	126.2	0.1	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S13/S18
FbpA	PF05833.6	gi|15922391|ref|NP_378060.1|	-	0.003	16.1	0.0	0.0037	15.8	0.0	1.2	1	0	0	1	1	1	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
HHH_4	PF14490.1	gi|15922391|ref|NP_378060.1|	-	0.0042	16.8	0.0	0.0074	16.0	0.0	1.5	1	0	0	1	1	1	1	Helix-hairpin-helix	containing	domain
AIRS_C	PF02769.17	gi|15922392|ref|NP_378061.1|	-	3.9e-11	43.2	0.0	7.2e-11	42.3	0.0	1.5	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|15922392|ref|NP_378061.1|	-	4.8e-10	39.5	0.1	1.1e-09	38.4	0.1	1.6	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
DUF2862	PF11061.3	gi|15922392|ref|NP_378061.1|	-	1.2	8.8	0.0	1.2	8.8	0.0	4.0	5	0	0	5	5	5	0	Protein	of	unknown	function	(DUF2862)
UPF0047	PF01894.12	gi|15922393|ref|NP_378062.1|	-	4.1e-39	133.0	0.1	4.7e-39	132.8	0.1	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0047
tRNA-synt_1b	PF00579.20	gi|15922395|ref|NP_378064.1|	-	9.5e-36	123.4	1.4	5.3e-24	84.8	0.2	2.0	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(W	and	Y)
Fimbrial_CS1	PF04449.7	gi|15922395|ref|NP_378064.1|	-	0.013	15.5	0.0	0.74	9.8	0.0	2.9	2	1	1	3	3	3	0	CS1	type	fimbrial	major	subunit
Toprim_4	PF13662.1	gi|15922396|ref|NP_378065.1|	-	8.5e-10	38.5	0.2	2.2e-09	37.2	0.1	1.7	1	0	0	1	1	1	1	Toprim	domain
Toprim	PF01751.17	gi|15922396|ref|NP_378065.1|	-	2.2e-05	24.3	0.4	2.2e-05	24.3	0.3	2.8	3	1	0	3	3	3	1	Toprim	domain
Toprim_2	PF13155.1	gi|15922396|ref|NP_378065.1|	-	0.017	15.4	0.0	0.055	13.7	0.0	1.9	1	1	0	1	1	1	0	Toprim-like
DNA_pol_B	PF00136.16	gi|15922397|ref|NP_378066.1|	-	6.3e-96	321.9	0.3	1e-95	321.2	0.2	1.3	1	0	0	1	1	1	1	DNA	polymerase	family	B
DNA_pol_B_exo1	PF03104.14	gi|15922397|ref|NP_378066.1|	-	3e-45	154.4	7.7	5.1e-44	150.4	4.8	2.6	1	1	0	1	1	1	1	DNA	polymerase	family	B,	exonuclease	domain
RNase_H_2	PF13482.1	gi|15922397|ref|NP_378066.1|	-	3.7e-12	46.3	0.4	1e-11	44.8	0.1	2.0	2	0	0	2	2	2	1	RNase_H	superfamily
DNA_pol_B_exo2	PF10108.4	gi|15922397|ref|NP_378066.1|	-	0.00068	19.2	0.1	0.0013	18.2	0.0	1.4	1	0	0	1	1	1	1	Predicted	3'-5'	exonuclease	related	to	the	exonuclease	domain	of	PolB
OmpH	PF03938.9	gi|15922397|ref|NP_378066.1|	-	0.00078	19.4	0.0	0.0026	17.7	0.0	1.8	2	0	0	2	2	2	1	Outer	membrane	protein	(OmpH-like)
Acetyltransf_1	PF00583.19	gi|15922398|ref|NP_378067.1|	-	1.4e-15	57.0	0.2	2e-15	56.5	0.1	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|15922398|ref|NP_378067.1|	-	4.4e-13	49.2	0.7	6.2e-13	48.7	0.5	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|15922398|ref|NP_378067.1|	-	4.2e-12	46.2	0.4	4.9e-12	46.0	0.3	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|15922398|ref|NP_378067.1|	-	1.3e-10	41.4	0.0	1.7e-10	41.0	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|15922398|ref|NP_378067.1|	-	2e-09	37.0	0.1	3.2e-09	36.4	0.0	1.3	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_9	PF13527.1	gi|15922398|ref|NP_378067.1|	-	6.2e-08	32.5	0.0	2e-07	30.9	0.0	1.7	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
GNAT_acetyltr_2	PF13718.1	gi|15922398|ref|NP_378067.1|	-	4.6e-05	22.8	0.1	0.0009	18.6	0.0	2.0	1	1	0	1	1	1	1	GNAT	acetyltransferase	2
Acetyltransf_8	PF13523.1	gi|15922398|ref|NP_378067.1|	-	6.2e-05	22.9	0.0	7.6e-05	22.6	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.1	gi|15922398|ref|NP_378067.1|	-	0.014	15.6	0.0	0.017	15.2	0.0	1.3	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
eRF1_1	PF03463.10	gi|15922399|ref|NP_378068.1|	-	4.5e-27	94.2	1.8	4.5e-27	94.2	1.2	2.0	2	0	0	2	2	2	1	eRF1	domain	1
eRF1_3	PF03465.10	gi|15922399|ref|NP_378068.1|	-	6.7e-24	84.3	2.7	1.8e-23	82.9	0.6	2.3	2	0	0	2	2	2	1	eRF1	domain	3
eRF1_2	PF03464.10	gi|15922399|ref|NP_378068.1|	-	8.2e-13	48.8	0.3	2e-12	47.5	0.0	1.8	2	0	0	2	2	2	1	eRF1	domain	2
TIR	PF01582.15	gi|15922399|ref|NP_378068.1|	-	0.053	12.9	1.6	7.8	5.9	0.0	2.6	2	0	0	2	2	2	0	TIR	domain
Radical_SAM	PF04055.16	gi|15922400|ref|NP_378069.1|	-	8.7e-13	48.7	0.3	1.8e-08	34.7	0.0	3.1	2	1	1	3	3	3	2	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|15922400|ref|NP_378069.1|	-	2.2e-06	27.7	0.0	4.2e-06	26.7	0.0	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Neugrin	PF06413.6	gi|15922400|ref|NP_378069.1|	-	0.12	12.1	0.0	0.18	11.5	0.0	1.2	1	0	0	1	1	1	0	Neugrin
DUF1122	PF06557.6	gi|15922401|ref|NP_378070.1|	-	1e-75	252.6	1.5	1.1e-75	252.4	1.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1122)
DUF629	PF04780.7	gi|15922401|ref|NP_378070.1|	-	0.11	10.9	0.0	0.17	10.3	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF629)
NTP_transf_2	PF01909.18	gi|15922402|ref|NP_378071.1|	-	1.6e-09	37.9	0.5	3.8e-09	36.7	0.3	1.8	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
Peptidase_M50	PF02163.17	gi|15922403|ref|NP_378072.1|	-	5.7e-23	80.8	0.3	2.6e-22	78.7	0.2	2.0	1	1	0	1	1	1	1	Peptidase	family	M50
PDZ_2	PF13180.1	gi|15922403|ref|NP_378072.1|	-	0.0011	18.8	0.0	0.0028	17.5	0.0	1.6	2	0	0	2	2	2	1	PDZ	domain
tRNA-synt_2	PF00152.15	gi|15922404|ref|NP_378073.1|	-	1.3e-95	319.9	0.2	1.6e-95	319.7	0.2	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.20	gi|15922404|ref|NP_378073.1|	-	4.2e-11	42.5	0.4	7.9e-11	41.6	0.3	1.5	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.15	gi|15922404|ref|NP_378073.1|	-	2.8e-08	33.2	0.6	4.7e-06	25.9	0.2	2.3	2	0	0	2	2	2	2	tRNA	synthetases	class	II	core	domain	(F)
tRNA-synt_2b	PF00587.20	gi|15922404|ref|NP_378073.1|	-	0.0028	17.2	0.3	1.6	8.2	0.0	2.4	2	0	0	2	2	2	2	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
LEM	PF03020.10	gi|15922404|ref|NP_378073.1|	-	0.047	13.1	0.1	0.17	11.3	0.0	2.0	1	0	0	1	1	1	0	LEM	domain
HTH_3	PF01381.17	gi|15922405|ref|NP_378074.1|	-	8.6e-17	60.7	0.1	2e-16	59.5	0.0	1.7	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.2	gi|15922405|ref|NP_378074.1|	-	1.3e-12	47.5	4.9	2.6e-12	46.5	0.0	3.6	4	0	0	4	4	4	1	Helix-turn-helix	domain
HTH_26	PF13443.1	gi|15922405|ref|NP_378074.1|	-	4e-11	42.9	0.0	1.1e-10	41.4	0.0	1.8	2	0	0	2	2	1	1	Cro/C1-type	HTH	DNA-binding	domain
HTH_31	PF13560.1	gi|15922405|ref|NP_378074.1|	-	8.5e-10	38.6	0.0	1.7e-09	37.6	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_37	PF13744.1	gi|15922405|ref|NP_378074.1|	-	6.4e-05	22.6	0.0	0.00016	21.4	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_25	PF13413.1	gi|15922405|ref|NP_378074.1|	-	0.0002	20.9	0.0	0.00068	19.2	0.0	1.9	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_psq	PF05225.11	gi|15922405|ref|NP_378074.1|	-	0.002	17.6	0.0	0.0064	16.0	0.0	1.9	2	0	0	2	2	2	1	helix-turn-helix,	Psq	domain
Methyltransf_23	PF13489.1	gi|15922405|ref|NP_378074.1|	-	0.0027	17.4	0.0	0.0048	16.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
HTH_24	PF13412.1	gi|15922405|ref|NP_378074.1|	-	0.0031	16.8	0.0	0.0063	15.8	0.0	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_17	PF12728.2	gi|15922405|ref|NP_378074.1|	-	0.0056	16.8	0.0	0.032	14.4	0.0	2.2	2	0	0	2	2	2	1	Helix-turn-helix	domain
LysM	PF01476.15	gi|15922405|ref|NP_378074.1|	-	0.0098	15.7	0.5	0.97	9.3	0.0	2.7	1	1	1	2	2	2	1	LysM	domain
HTH_35	PF13693.1	gi|15922405|ref|NP_378074.1|	-	0.011	15.4	0.1	0.027	14.2	0.1	1.5	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
HTH_7	PF02796.10	gi|15922405|ref|NP_378074.1|	-	0.018	14.8	0.1	0.043	13.6	0.1	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	resolvase
HTH_10	PF04967.7	gi|15922405|ref|NP_378074.1|	-	0.033	13.7	0.1	0.11	12.0	0.0	1.9	2	0	0	2	2	2	0	HTH	DNA	binding	domain
MarR	PF01047.17	gi|15922405|ref|NP_378074.1|	-	0.11	12.2	0.0	0.33	10.6	0.0	1.8	1	0	0	1	1	1	0	MarR	family
EamA	PF00892.15	gi|15922407|ref|NP_378076.1|	-	3.3e-30	104.7	49.9	2.2e-17	63.2	17.2	2.1	2	0	0	2	2	2	2	EamA-like	transporter	family
EmrE	PF13536.1	gi|15922407|ref|NP_378076.1|	-	8.4	6.6	43.4	0.024	14.8	8.6	3.5	1	1	0	2	2	2	0	Multidrug	resistance	efflux	transporter
Sulfolobus_pRN	PF05584.6	gi|15922409|ref|NP_378078.1|	-	0.00013	21.8	0.0	0.00014	21.7	0.0	1.1	1	0	0	1	1	1	1	Sulfolobus	plasmid	regulatory	protein
DUF2582	PF10771.4	gi|15922409|ref|NP_378078.1|	-	0.0015	18.3	0.0	0.0016	18.2	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2582)
Cullin	PF00888.17	gi|15922409|ref|NP_378078.1|	-	0.046	12.2	0.1	0.049	12.1	0.1	1.0	1	0	0	1	1	1	0	Cullin	family
HTH_9	PF08221.6	gi|15922409|ref|NP_378078.1|	-	0.068	13.0	0.0	0.082	12.7	0.0	1.1	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
TFIIE_alpha	PF02002.12	gi|15922409|ref|NP_378078.1|	-	0.12	11.8	0.0	0.13	11.8	0.0	1.1	1	0	0	1	1	1	0	TFIIE	alpha	subunit
DUF72	PF01904.13	gi|15922411|ref|NP_378080.1|	-	1.1e-35	123.4	0.4	1.2e-35	123.3	0.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF72
Flavodoxin_2	PF02525.12	gi|15922411|ref|NP_378080.1|	-	0.0031	17.0	0.4	0.0055	16.2	0.2	1.4	1	1	0	1	1	1	1	Flavodoxin-like	fold
HTH_Tnp_1	PF01527.15	gi|15922411|ref|NP_378080.1|	-	0.018	14.9	0.0	0.034	14.1	0.0	1.4	1	0	0	1	1	1	0	Transposase
DUF3139	PF11337.3	gi|15922412|ref|NP_378081.1|	-	0.23	11.7	6.7	0.12	12.6	1.3	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3139)
TusA	PF01206.12	gi|15922413|ref|NP_378082.1|	-	2.3e-19	68.7	0.1	2.7e-19	68.5	0.1	1.1	1	0	0	1	1	1	1	Sulfurtransferase	TusA
DUF2249	PF10006.4	gi|15922413|ref|NP_378082.1|	-	5.4e-07	29.0	0.0	7.7e-07	28.5	0.0	1.3	1	1	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2249)
DUF1930	PF09122.5	gi|15922413|ref|NP_378082.1|	-	0.0043	16.7	0.0	0.0055	16.4	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1930)
Ldh_2	PF02615.9	gi|15922415|ref|NP_378084.1|	-	6.1e-54	182.9	0.2	1.4e-53	181.7	0.1	1.6	1	1	0	1	1	1	1	Malate/L-lactate	dehydrogenase
Rifin_STEVOR	PF02009.11	gi|15922416|ref|NP_378085.1|	-	1.9	8.0	16.2	0.12	11.9	7.2	1.9	2	0	0	2	2	2	0	Rifin/stevor	family
HTH_37	PF13744.1	gi|15922417|ref|NP_378086.1|	-	0.00025	20.7	0.0	0.00042	20.0	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|15922417|ref|NP_378086.1|	-	0.00052	19.3	0.1	0.00099	18.4	0.1	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
Sigma70_r4_2	PF08281.7	gi|15922417|ref|NP_378086.1|	-	0.00064	19.1	0.1	0.0012	18.2	0.0	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_3	PF01381.17	gi|15922417|ref|NP_378086.1|	-	0.00079	19.2	0.8	0.0012	18.6	0.6	1.4	1	0	0	1	1	1	1	Helix-turn-helix
HTH_23	PF13384.1	gi|15922417|ref|NP_378086.1|	-	0.0014	18.2	0.1	0.0025	17.4	0.0	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_19	PF12844.2	gi|15922417|ref|NP_378086.1|	-	0.0015	18.5	0.2	0.0023	17.9	0.1	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
Sigma70_r4	PF04545.11	gi|15922417|ref|NP_378086.1|	-	0.015	14.5	0.0	0.027	13.7	0.0	1.4	1	0	0	1	1	1	0	Sigma-70,	region	4
DivIVA	PF05103.8	gi|15922417|ref|NP_378086.1|	-	0.028	14.4	0.1	0.038	14.0	0.1	1.1	1	0	0	1	1	1	0	DivIVA	protein
GerE	PF00196.14	gi|15922417|ref|NP_378086.1|	-	0.031	13.5	0.0	0.053	12.8	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
HTH_7	PF02796.10	gi|15922417|ref|NP_378086.1|	-	0.04	13.7	0.1	0.087	12.6	0.1	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	resolvase
DUF1019	PF06254.6	gi|15922417|ref|NP_378086.1|	-	0.044	13.9	0.2	1.1	9.5	0.0	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1019)
HTH_26	PF13443.1	gi|15922417|ref|NP_378086.1|	-	0.055	13.6	0.2	0.21	11.8	0.0	1.9	1	1	1	2	2	2	0	Cro/C1-type	HTH	DNA-binding	domain
HTH_28	PF13518.1	gi|15922417|ref|NP_378086.1|	-	0.081	12.9	0.0	0.14	12.1	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
USP7_C2	PF14533.1	gi|15922417|ref|NP_378086.1|	-	0.098	12.0	0.2	0.25	10.7	0.1	1.7	1	1	1	2	2	2	0	Ubiquitin-specific	protease	C-terminal
HTH_38	PF13936.1	gi|15922417|ref|NP_378086.1|	-	0.1	12.1	0.2	0.15	11.5	0.1	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
RepB	PF07506.6	gi|15922417|ref|NP_378086.1|	-	0.13	12.1	0.0	0.17	11.7	0.0	1.3	1	0	0	1	1	1	0	RepB	plasmid	partitioning	protein
Acetyltransf_1	PF00583.19	gi|15922418|ref|NP_378087.1|	-	1.4e-15	57.0	0.0	2.6e-15	56.1	0.0	1.5	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_3	PF13302.1	gi|15922418|ref|NP_378087.1|	-	1.3e-13	51.3	0.0	1.6e-13	50.9	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|15922418|ref|NP_378087.1|	-	4.4e-10	39.7	0.2	1.3e-09	38.1	0.1	1.6	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|15922418|ref|NP_378087.1|	-	2.9e-09	37.0	0.0	1.1e-08	35.2	0.0	1.8	1	1	1	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.1	gi|15922418|ref|NP_378087.1|	-	1.5e-08	34.6	0.2	3.4e-08	33.5	0.1	1.6	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|15922418|ref|NP_378087.1|	-	3.8e-08	33.2	0.1	3.9e-06	26.7	0.0	2.2	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|15922418|ref|NP_378087.1|	-	2.1e-06	27.4	0.0	6.2e-06	25.8	0.0	1.8	1	1	1	2	2	2	1	FR47-like	protein
Acetyltransf_8	PF13523.1	gi|15922418|ref|NP_378087.1|	-	8.3e-06	25.7	0.0	4e-05	23.5	0.0	1.8	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.1	gi|15922418|ref|NP_378087.1|	-	0.0011	18.7	0.0	0.0028	17.5	0.0	1.6	1	0	0	1	1	1	1	GCN5-related	N-acetyl-transferase
Acetyltransf_6	PF13480.1	gi|15922418|ref|NP_378087.1|	-	0.021	14.7	0.0	0.03	14.2	0.0	1.6	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
GNAT_acetyltr_2	PF13718.1	gi|15922418|ref|NP_378087.1|	-	0.042	13.1	0.0	0.061	12.6	0.0	1.3	1	0	0	1	1	1	0	GNAT	acetyltransferase	2
3HCDH_N	PF02737.13	gi|15922419|ref|NP_378088.1|	-	3.2e-65	219.1	0.2	4.8e-65	218.5	0.1	1.2	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
3HCDH	PF00725.17	gi|15922419|ref|NP_378088.1|	-	1.3e-49	166.5	0.1	8.4e-25	87.0	0.0	2.9	3	0	0	3	3	3	2	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
NAD_Gly3P_dh_N	PF01210.18	gi|15922419|ref|NP_378088.1|	-	0.0011	18.7	0.0	0.0022	17.7	0.0	1.6	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
UDPG_MGDP_dh_N	PF03721.9	gi|15922419|ref|NP_378088.1|	-	0.0049	16.2	0.0	0.0089	15.4	0.0	1.5	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
NAD_binding_2	PF03446.10	gi|15922419|ref|NP_378088.1|	-	0.0051	16.6	0.2	0.012	15.4	0.1	1.7	1	1	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
DAO	PF01266.19	gi|15922419|ref|NP_378088.1|	-	0.0097	14.8	0.1	0.015	14.2	0.1	1.3	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Methyltransf_18	PF12847.2	gi|15922419|ref|NP_378088.1|	-	0.01	16.3	0.0	0.029	14.9	0.0	1.7	1	0	0	1	1	1	0	Methyltransferase	domain
Pyr_redox	PF00070.22	gi|15922419|ref|NP_378088.1|	-	0.012	15.9	0.2	0.033	14.5	0.2	1.7	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.9	gi|15922419|ref|NP_378088.1|	-	0.028	14.3	0.0	0.054	13.3	0.0	1.6	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
F420_oxidored	PF03807.12	gi|15922419|ref|NP_378088.1|	-	0.069	13.5	0.6	0.22	11.9	0.4	2.0	1	1	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
AlaDh_PNT_C	PF01262.16	gi|15922419|ref|NP_378088.1|	-	0.13	11.8	0.0	0.23	10.9	0.0	1.4	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
ThiF	PF00899.16	gi|15922419|ref|NP_378088.1|	-	0.38	10.5	3.1	0.84	9.4	0.8	2.3	3	0	0	3	3	3	0	ThiF	family
AMP-binding_C_2	PF14535.1	gi|15922420|ref|NP_378089.1|	-	9e-19	67.3	0.0	1.5e-18	66.5	0.0	1.4	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
AMP-binding	PF00501.23	gi|15922420|ref|NP_378089.1|	-	1.2e-06	27.1	0.0	2.1e-06	26.4	0.0	1.3	1	1	0	1	1	1	1	AMP-binding	enzyme
7kD_DNA_binding	PF02294.13	gi|15922421|ref|NP_378090.1|	-	8.3e-42	140.7	3.5	9.4e-42	140.5	2.4	1.0	1	0	0	1	1	1	1	7kD	DNA-binding	domain
Ribosomal_S5	PF00333.15	gi|15922421|ref|NP_378090.1|	-	0.17	11.6	0.6	0.29	10.9	0.4	1.6	1	1	0	1	1	1	0	Ribosomal	protein	S5,	N-terminal	domain
B12-binding	PF02310.14	gi|15922422|ref|NP_378091.1|	-	4.9e-22	78.0	0.4	5.9e-22	77.7	0.3	1.1	1	0	0	1	1	1	1	B12	binding	domain
TPP_enzyme_N	PF02776.13	gi|15922422|ref|NP_378091.1|	-	0.014	14.9	0.1	3	7.2	0.0	2.8	3	0	0	3	3	3	0	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
Nitro_FeMo-Co	PF02579.12	gi|15922422|ref|NP_378091.1|	-	0.019	15.0	0.7	9.3	6.4	0.0	2.8	2	1	1	3	3	3	0	Dinitrogenase	iron-molybdenum	cofactor
ADH_zinc_N	PF00107.21	gi|15922422|ref|NP_378091.1|	-	0.046	13.2	0.1	0.61	9.6	0.0	2.1	1	1	1	2	2	2	0	Zinc-binding	dehydrogenase
QRPTase_C	PF01729.14	gi|15922422|ref|NP_378091.1|	-	0.091	12.2	0.1	0.14	11.6	0.0	1.4	1	1	0	1	1	1	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
MoCF_biosynth	PF00994.19	gi|15922422|ref|NP_378091.1|	-	0.15	11.4	0.7	1.5	8.2	0.5	2.3	1	1	0	1	1	1	0	Probable	molybdopterin	binding	domain
ArgK	PF03308.11	gi|15922423|ref|NP_378092.1|	-	1.1e-59	201.4	6.0	1.3e-59	201.1	4.2	1.1	1	0	0	1	1	1	1	ArgK	protein
cobW	PF02492.14	gi|15922423|ref|NP_378092.1|	-	3.5e-05	23.3	0.4	7.9e-05	22.1	0.0	1.7	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
DUF3647	PF12363.3	gi|15922423|ref|NP_378092.1|	-	0.017	15.2	2.6	1.9	8.5	0.1	2.5	2	0	0	2	2	2	0	Phage	protein
GTP_EFTU	PF00009.22	gi|15922423|ref|NP_378092.1|	-	0.021	14.2	1.2	0.022	14.1	0.0	1.6	2	0	0	2	2	2	0	Elongation	factor	Tu	GTP	binding	domain
FIVAR	PF07554.8	gi|15922423|ref|NP_378092.1|	-	0.13	12.5	1.1	0.25	11.5	0.4	1.7	2	0	0	2	2	2	0	Uncharacterised	Sugar-binding	Domain
YadA_stalk	PF05662.9	gi|15922423|ref|NP_378092.1|	-	0.28	11.0	3.0	0.61	9.9	2.1	1.5	1	0	0	1	1	1	0	Coiled	stalk	of	trimeric	autotransporter	adhesin
DUF2250	PF10007.4	gi|15922424|ref|NP_378093.1|	-	9.4e-71	233.8	16.4	6.2e-39	131.8	4.7	2.0	2	0	0	2	2	2	2	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF4423	PF14394.1	gi|15922424|ref|NP_378093.1|	-	0.00011	21.8	2.4	0.0021	17.5	0.2	2.4	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4423)
DUF4393	PF14337.1	gi|15922424|ref|NP_378093.1|	-	0.00022	20.7	2.0	0.31	10.4	0.2	2.2	1	1	1	2	2	2	2	Domain	of	unknown	function	(DUF4393)
TrmB	PF01978.14	gi|15922424|ref|NP_378093.1|	-	0.0005	19.7	2.8	0.096	12.4	0.0	3.6	3	1	1	4	4	4	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_45	PF14947.1	gi|15922424|ref|NP_378093.1|	-	0.0024	17.6	7.1	0.023	14.4	1.9	3.3	2	2	0	2	2	2	1	Winged	helix-turn-helix
MarR	PF01047.17	gi|15922424|ref|NP_378093.1|	-	0.016	14.9	1.2	0.14	11.9	0.0	3.1	3	0	0	3	3	3	0	MarR	family
DUF1890	PF09001.6	gi|15922424|ref|NP_378093.1|	-	0.053	13.5	0.5	0.13	12.2	0.3	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1890)
Phage_rep_org_N	PF09681.5	gi|15922424|ref|NP_378093.1|	-	0.054	13.0	3.9	5.9	6.4	0.0	3.0	2	1	1	3	3	3	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
HemN_C	PF06969.11	gi|15922424|ref|NP_378093.1|	-	0.095	12.7	2.3	1.9	8.5	0.0	2.9	3	0	0	3	3	3	0	HemN	C-terminal	domain
DUF2806	PF10987.3	gi|15922424|ref|NP_378093.1|	-	0.12	11.8	2.0	0.52	9.7	0.7	2.3	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2806)
DUF3783	PF12646.2	gi|15922424|ref|NP_378093.1|	-	1.7	8.4	4.9	9.3	6.0	0.1	3.3	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF3783)
DUF592	PF04574.8	gi|15922424|ref|NP_378093.1|	-	2.7	7.5	11.1	4	6.9	1.0	2.8	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF592)
tRNA_synt_1c_R1	PF04558.10	gi|15922424|ref|NP_378093.1|	-	2.9	7.4	6.1	0.49	9.9	1.0	2.2	2	1	0	2	2	2	0	Glutaminyl-tRNA	synthetase,	non-specific	RNA	binding	region	part	1
Abhydrolase_6	PF12697.2	gi|15922425|ref|NP_378094.1|	-	2.4e-23	83.1	0.0	4.1e-17	62.8	0.0	2.0	1	1	1	2	2	2	2	Alpha/beta	hydrolase	family
Abhydrolase_5	PF12695.2	gi|15922425|ref|NP_378094.1|	-	3.9e-21	75.3	0.0	4.7e-21	75.0	0.0	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|15922425|ref|NP_378094.1|	-	3.5e-16	59.4	0.2	2e-10	40.6	0.0	2.1	1	1	1	2	2	2	2	alpha/beta	hydrolase	fold
Ndr	PF03096.9	gi|15922425|ref|NP_378094.1|	-	9.8e-06	24.2	0.2	7.5e-05	21.3	0.1	1.9	1	1	1	2	2	2	1	Ndr	family
Abhydrolase_4	PF08386.5	gi|15922425|ref|NP_378094.1|	-	0.00062	19.6	0.0	0.0011	18.7	0.0	1.3	1	0	0	1	1	1	1	TAP-like	protein
Hydrolase_4	PF12146.3	gi|15922425|ref|NP_378094.1|	-	0.0041	16.9	0.0	0.0093	15.7	0.0	1.6	2	0	0	2	2	2	1	Putative	lysophospholipase
DLH	PF01738.13	gi|15922425|ref|NP_378094.1|	-	0.0041	16.4	0.0	0.0057	15.9	0.0	1.2	1	0	0	1	1	1	1	Dienelactone	hydrolase	family
DUF915	PF06028.6	gi|15922425|ref|NP_378094.1|	-	0.051	12.6	0.0	0.096	11.7	0.0	1.4	1	0	0	1	1	1	0	Alpha/beta	hydrolase	of	unknown	function	(DUF915)
CW_binding_2	PF04122.7	gi|15922425|ref|NP_378094.1|	-	0.063	13.4	0.0	2.1	8.6	0.0	2.2	1	1	1	2	2	2	0	Putative	cell	wall	binding	repeat	2
FSH1	PF03959.8	gi|15922425|ref|NP_378094.1|	-	0.087	12.2	0.0	0.12	11.7	0.0	1.4	1	0	0	1	1	1	0	Serine	hydrolase	(FSH1)
Esterase	PF00756.15	gi|15922425|ref|NP_378094.1|	-	0.15	11.4	0.0	0.21	10.9	0.0	1.4	1	0	0	1	1	1	0	Putative	esterase
CbiA	PF01656.18	gi|15922426|ref|NP_378095.1|	-	0.043	13.2	0.0	0.19	11.1	0.0	2.0	1	1	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
PEPcase_2	PF14010.1	gi|15922427|ref|NP_378096.1|	-	9.9e-207	687.0	4.1	1.1e-206	686.9	2.8	1.0	1	0	0	1	1	1	1	Phosphoenolpyruvate	carboxylase
TPR_8	PF13181.1	gi|15922427|ref|NP_378096.1|	-	1.1	9.2	4.0	0.53	10.1	0.2	2.5	3	0	0	3	3	3	0	Tetratricopeptide	repeat
AhpC-TSA	PF00578.16	gi|15922428|ref|NP_378097.1|	-	1.4e-45	153.9	0.1	1.8e-45	153.6	0.1	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|15922428|ref|NP_378097.1|	-	6.6e-26	90.5	0.0	7.7e-26	90.3	0.0	1.1	1	0	0	1	1	1	1	Redoxin
Thioredoxin_8	PF13905.1	gi|15922428|ref|NP_378097.1|	-	1.3e-06	28.4	0.0	2.1e-06	27.7	0.0	1.3	1	0	0	1	1	1	1	Thioredoxin-like
AhpC-TSA_2	PF13911.1	gi|15922428|ref|NP_378097.1|	-	0.0005	19.9	0.1	0.00075	19.4	0.0	1.3	1	1	0	1	1	1	1	AhpC/TSA	antioxidant	enzyme
SCO1-SenC	PF02630.9	gi|15922428|ref|NP_378097.1|	-	0.0026	17.3	0.2	0.036	13.6	0.1	2.1	1	1	0	1	1	1	1	SCO1/SenC
DUF899	PF05988.7	gi|15922428|ref|NP_378097.1|	-	0.043	13.2	0.0	0.046	13.1	0.0	1.1	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF899)
TPR_1	PF00515.23	gi|15922428|ref|NP_378097.1|	-	0.14	11.8	0.7	0.28	10.8	0.5	1.5	1	0	0	1	1	1	0	Tetratricopeptide	repeat
Carb_kinase	PF01256.12	gi|15922429|ref|NP_378098.1|	-	7.1e-54	182.6	0.0	9.6e-54	182.2	0.0	1.2	1	0	0	1	1	1	1	Carbohydrate	kinase
YjeF_N	PF03853.10	gi|15922429|ref|NP_378098.1|	-	1e-43	148.8	0.0	3e-43	147.3	0.0	1.8	2	0	0	2	2	2	1	YjeF-related	protein	N-terminus
HK	PF02110.10	gi|15922429|ref|NP_378098.1|	-	1.5e-09	37.3	0.3	3e-07	29.8	0.0	2.2	2	0	0	2	2	2	2	Hydroxyethylthiazole	kinase	family
Phos_pyr_kin	PF08543.7	gi|15922429|ref|NP_378098.1|	-	0.00037	19.7	0.0	0.00066	18.9	0.0	1.3	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
VWA_2	PF13519.1	gi|15922429|ref|NP_378098.1|	-	0.081	13.0	0.0	0.37	10.8	0.0	2.0	2	0	0	2	2	2	0	von	Willebrand	factor	type	A	domain
Peptidase_C13	PF01650.13	gi|15922430|ref|NP_378099.1|	-	0.0068	15.7	0.7	0.11	11.7	0.2	2.1	1	1	1	2	2	2	1	Peptidase	C13	family
Blo-t-5	PF11642.3	gi|15922430|ref|NP_378099.1|	-	0.007	16.1	9.0	0.013	15.2	5.1	2.2	1	1	1	2	2	2	2	Mite	allergen	Blo	t	5
DUF3849	PF12960.2	gi|15922430|ref|NP_378099.1|	-	0.061	13.2	0.3	0.08	12.8	0.2	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3849)
TPR_2	PF07719.12	gi|15922430|ref|NP_378099.1|	-	0.069	13.1	2.1	0.92	9.5	0.2	2.6	2	0	0	2	2	2	0	Tetratricopeptide	repeat
CUT	PF02376.10	gi|15922430|ref|NP_378099.1|	-	0.08	12.7	0.3	1.8	8.4	0.0	2.6	1	1	1	2	2	2	0	CUT	domain
SPATA19	PF15212.1	gi|15922430|ref|NP_378099.1|	-	0.14	12.1	0.2	0.25	11.3	0.1	1.4	1	0	0	1	1	1	0	Spermatogenesis-associated	protein	19,	mitochondrial
TFIIE_beta	PF02186.10	gi|15922430|ref|NP_378099.1|	-	0.23	11.4	2.4	0.24	11.4	0.3	2.0	1	1	1	2	2	2	0	TFIIE	beta	subunit	core	domain
FliL	PF03748.9	gi|15922430|ref|NP_378099.1|	-	2.2	8.3	6.0	5.4	7.0	0.2	2.2	1	1	1	2	2	2	0	Flagellar	basal	body-associated	protein	FliL
Ish1	PF10281.4	gi|15922430|ref|NP_378099.1|	-	3.6	7.7	6.9	21	5.3	3.3	2.8	1	1	0	1	1	1	0	Putative	stress-responsive	nuclear	envelope	protein
Phage_CII	PF05269.6	gi|15922431|ref|NP_378100.1|	-	0.00011	22.0	0.1	0.45	10.5	0.0	2.2	1	1	1	2	2	2	2	Bacteriophage	CII	protein
DUF2024	PF09630.5	gi|15922431|ref|NP_378100.1|	-	0.00017	21.1	1.9	0.18	11.5	0.1	2.1	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF2024)
DUF2937	PF11157.3	gi|15922431|ref|NP_378100.1|	-	0.015	14.6	1.3	0.82	8.9	0.2	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2937)
TerB-N	PF13208.1	gi|15922431|ref|NP_378100.1|	-	0.017	14.5	0.2	0.73	9.2	0.1	2.0	1	1	1	2	2	2	0	TerB-N
DUF892	PF05974.7	gi|15922431|ref|NP_378100.1|	-	0.019	14.7	11.0	0.34	10.7	1.1	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF892)
DUF3239	PF11580.3	gi|15922431|ref|NP_378100.1|	-	0.037	14.0	0.0	8.9	6.3	0.0	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3239)
Helicase_C_3	PF13625.1	gi|15922431|ref|NP_378100.1|	-	0.047	13.4	0.8	8	6.2	0.0	2.5	1	1	1	2	2	2	0	Helicase	conserved	C-terminal	domain
DUF2362	PF10154.4	gi|15922431|ref|NP_378100.1|	-	0.075	11.6	2.0	3.6	6.1	0.1	2.0	1	1	1	2	2	2	0	Uncharacterized	conserved	protein	(DUF2362)
HTH_30	PF13556.1	gi|15922431|ref|NP_378100.1|	-	0.1	12.1	0.9	8.7	6.0	0.0	2.6	2	0	0	2	2	2	0	PucR	C-terminal	helix-turn-helix	domain
DUF706	PF05153.10	gi|15922431|ref|NP_378100.1|	-	0.14	11.4	0.5	6	6.1	0.0	2.1	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF706)
UvrD-helicase	PF00580.16	gi|15922431|ref|NP_378100.1|	-	0.2	10.9	2.8	0.96	8.6	2.0	1.8	1	1	0	1	1	1	0	UvrD/REP	helicase	N-terminal	domain
RNA_polI_A14	PF08203.6	gi|15922431|ref|NP_378100.1|	-	0.32	11.2	1.5	4.7	7.5	0.0	2.3	2	1	0	2	2	2	0	Yeast	RNA	polymerase	I	subunit	RPA14
DUF87	PF01935.12	gi|15922432|ref|NP_378101.1|	-	2.5e-45	155.0	5.1	4e-45	154.4	3.5	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF87
AAA_10	PF12846.2	gi|15922432|ref|NP_378101.1|	-	1.2e-21	77.4	1.2	4.4e-21	75.6	0.8	1.8	1	1	0	1	1	1	1	AAA-like	domain
DUF853	PF05872.7	gi|15922432|ref|NP_378101.1|	-	3.8e-12	45.3	0.0	6e-07	28.1	0.0	2.2	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
HAS-barrel	PF09378.5	gi|15922432|ref|NP_378101.1|	-	2.4e-09	36.9	0.2	2.4e-09	36.9	0.1	2.9	3	1	0	3	3	3	1	HAS	barrel	domain
FtsK_SpoIIIE	PF01580.13	gi|15922432|ref|NP_378101.1|	-	2.4e-07	30.4	0.0	0.00086	18.8	0.0	2.4	2	0	0	2	2	2	2	FtsK/SpoIIIE	family
TrwB_AAD_bind	PF10412.4	gi|15922432|ref|NP_378101.1|	-	4.5e-05	22.2	0.0	0.00019	20.2	0.0	1.8	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
Zot	PF05707.7	gi|15922432|ref|NP_378101.1|	-	0.0075	15.7	0.2	0.075	12.4	0.1	2.5	3	0	0	3	3	3	1	Zonular	occludens	toxin	(Zot)
DAP3	PF10236.4	gi|15922432|ref|NP_378101.1|	-	0.0081	15.1	0.7	0.059	12.3	0.4	2.1	1	1	1	2	2	2	1	Mitochondrial	ribosomal	death-associated	protein	3
ABC_tran	PF00005.22	gi|15922432|ref|NP_378101.1|	-	0.075	13.3	0.0	0.15	12.3	0.0	1.5	1	0	0	1	1	1	0	ABC	transporter
MtrG	PF04210.8	gi|15922432|ref|NP_378101.1|	-	0.12	12.1	1.2	8	6.2	0.2	3.4	2	0	0	2	2	2	0	Tetrahydromethanopterin	S-methyltransferase,	subunit	G
ResIII	PF04851.10	gi|15922432|ref|NP_378101.1|	-	0.19	11.5	5.5	4	7.2	3.7	2.6	1	1	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
Metallophos	PF00149.23	gi|15922433|ref|NP_378102.1|	-	1.8e-15	56.8	0.2	3.1e-15	56.0	0.2	1.4	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|15922433|ref|NP_378102.1|	-	8.2e-13	48.4	0.0	1.3e-12	47.7	0.0	1.3	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
DUF573	PF04504.9	gi|15922433|ref|NP_378102.1|	-	0.048	13.9	0.6	0.1	12.8	0.1	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF573
AAA_23	PF13476.1	gi|15922434|ref|NP_378103.1|	-	7.2e-20	72.1	23.6	7.2e-20	72.1	16.4	7.3	1	1	5	6	6	1	1	AAA	domain
SMC_N	PF02463.14	gi|15922434|ref|NP_378103.1|	-	3.4e-14	52.5	0.6	3.4e-14	52.5	0.4	2.8	2	1	0	2	2	1	1	RecF/RecN/SMC	N	terminal	domain
Rad50_zn_hook	PF04423.9	gi|15922434|ref|NP_378103.1|	-	3.5e-14	51.9	2.4	3.5e-14	51.9	1.6	10.9	11	3	0	11	11	11	1	Rad50	zinc	hook	motif
AAA_13	PF13166.1	gi|15922434|ref|NP_378103.1|	-	1.1e-10	40.6	130.1	1.3e-08	33.8	3.9	5.2	1	1	3	5	5	4	4	AAA	domain
AAA_29	PF13555.1	gi|15922434|ref|NP_378103.1|	-	1.2e-06	27.9	0.0	2.3e-06	27.0	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
SbcCD_C	PF13558.1	gi|15922434|ref|NP_378103.1|	-	4.8e-06	26.3	0.0	1.5e-05	24.7	0.0	1.9	1	0	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
ABC_tran	PF00005.22	gi|15922434|ref|NP_378103.1|	-	5.9e-06	26.6	0.2	5.9e-06	26.6	0.1	6.4	2	1	1	3	3	1	1	ABC	transporter
AAA_27	PF13514.1	gi|15922434|ref|NP_378103.1|	-	7.4e-06	23.9	0.0	7.4e-06	23.9	0.0	5.8	3	1	1	5	5	4	2	AAA	domain
AAA_21	PF13304.1	gi|15922434|ref|NP_378103.1|	-	4.5e-05	23.5	86.1	1.5e+04	-36.7	59.7	5.0	1	1	0	1	1	0	0	AAA	domain
DUF3584	PF12128.3	gi|15922434|ref|NP_378103.1|	-	6.2e-05	20.5	27.9	6.2e-05	20.5	19.3	3.7	1	1	3	4	4	3	2	Protein	of	unknown	function	(DUF3584)
DUF258	PF03193.11	gi|15922434|ref|NP_378103.1|	-	0.0039	16.4	0.0	0.019	14.1	0.0	2.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
zinc_ribbon_2	PF13240.1	gi|15922434|ref|NP_378103.1|	-	0.037	13.5	0.2	0.077	12.5	0.2	1.6	1	0	0	1	1	1	0	zinc-ribbon	domain
AAA_16	PF13191.1	gi|15922434|ref|NP_378103.1|	-	0.49	10.3	0.0	0.49	10.3	0.0	3.4	3	1	1	4	4	4	0	AAA	ATPase	domain
NurA	PF09376.5	gi|15922435|ref|NP_378104.1|	-	2.3e-36	125.5	2.5	3.2e-36	125.0	1.7	1.2	1	0	0	1	1	1	1	NurA	domain
DUF106	PF01956.11	gi|15922435|ref|NP_378104.1|	-	0.041	13.4	0.0	0.081	12.4	0.0	1.4	1	0	0	1	1	1	0	Integral	membrane	protein	DUF106
Cation_efflux	PF01545.16	gi|15922436|ref|NP_378105.1|	-	2.5e-37	128.5	19.3	2.9e-37	128.2	13.4	1.1	1	0	0	1	1	1	1	Cation	efflux	family
Methyltransf_11	PF08241.7	gi|15922437|ref|NP_378106.1|	-	1.4e-08	35.0	0.0	2.2e-08	34.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|15922437|ref|NP_378106.1|	-	0.022	13.8	0.0	0.044	12.8	0.0	1.5	1	1	0	1	1	1	0	ubiE/COQ5	methyltransferase	family
CBS	PF00571.23	gi|15922439|ref|NP_378108.1|	-	5.1e-43	144.5	9.5	2.5e-13	49.5	0.2	4.1	4	0	0	4	4	4	4	CBS	domain
Ribosomal_L9_C	PF03948.9	gi|15922439|ref|NP_378108.1|	-	0.0009	19.2	0.9	0.54	10.3	0.0	3.7	4	0	0	4	4	4	2	Ribosomal	protein	L9,	C-terminal	domain
NICE-3	PF07406.6	gi|15922439|ref|NP_378108.1|	-	0.019	14.4	1.0	0.38	10.2	0.0	2.7	1	1	1	3	3	3	0	NICE-3	protein
DUF77	PF01910.12	gi|15922440|ref|NP_378109.1|	-	2.5e-26	91.1	0.1	2.8e-26	91.0	0.1	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF77
Alba	PF01918.16	gi|15922440|ref|NP_378109.1|	-	0.1	12.1	0.0	0.22	11.1	0.0	1.7	1	1	0	1	1	1	0	Alba
FUR	PF01475.14	gi|15922441|ref|NP_378110.1|	-	1.5e-24	86.1	0.1	1.8e-24	85.9	0.0	1.1	1	0	0	1	1	1	1	Ferric	uptake	regulator	family
HTH_20	PF12840.2	gi|15922441|ref|NP_378110.1|	-	1.1e-05	25.0	0.0	2.1e-05	24.2	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|15922441|ref|NP_378110.1|	-	0.00052	19.3	0.3	0.0017	17.6	0.0	2.0	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_5	PF01022.15	gi|15922441|ref|NP_378110.1|	-	0.0012	18.5	0.0	0.033	13.8	0.0	2.7	1	1	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
Penicillinase_R	PF03965.11	gi|15922441|ref|NP_378110.1|	-	0.0013	18.8	0.0	0.0019	18.2	0.0	1.3	1	0	0	1	1	1	1	Penicillinase	repressor
HTH_11	PF08279.7	gi|15922441|ref|NP_378110.1|	-	0.0032	17.0	0.1	0.019	14.6	0.1	2.3	1	1	0	1	1	1	1	HTH	domain
HxlR	PF01638.12	gi|15922441|ref|NP_378110.1|	-	0.02	14.5	0.0	0.043	13.4	0.0	1.6	2	0	0	2	2	2	0	HxlR-like	helix-turn-helix
TrmB	PF01978.14	gi|15922441|ref|NP_378110.1|	-	0.034	13.8	0.0	0.12	12.1	0.0	2.0	1	1	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_Tnp_Tc3_2	PF01498.13	gi|15922441|ref|NP_378110.1|	-	0.083	12.9	0.0	0.38	10.8	0.0	2.0	1	1	1	2	2	2	0	Transposase
HTH_32	PF13565.1	gi|15922441|ref|NP_378110.1|	-	0.1	13.3	0.0	0.17	12.7	0.0	1.3	1	0	0	1	1	1	0	Homeodomain-like	domain
PadR	PF03551.9	gi|15922441|ref|NP_378110.1|	-	0.11	12.2	0.1	0.22	11.3	0.0	1.5	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
IU_nuc_hydro	PF01156.14	gi|15922442|ref|NP_378111.1|	-	4.5e-82	275.7	0.0	5e-82	275.6	0.0	1.0	1	0	0	1	1	1	1	Inosine-uridine	preferring	nucleoside	hydrolase
AAA_13	PF13166.1	gi|15922443|ref|NP_378112.1|	-	2.2e-07	29.7	72.1	0.0046	15.5	4.3	3.8	1	1	1	3	3	3	2	AAA	domain
AAA_27	PF13514.1	gi|15922443|ref|NP_378112.1|	-	2.7e-07	28.7	55.3	0.00035	18.4	0.1	3.2	1	1	1	3	3	3	3	AAA	domain
Spc7	PF08317.6	gi|15922443|ref|NP_378112.1|	-	0.00025	19.8	73.1	0.011	14.4	23.3	4.1	1	1	4	5	5	5	3	Spc7	kinetochore	protein
BLOC1_2	PF10046.4	gi|15922443|ref|NP_378112.1|	-	0.00053	20.0	60.0	0.0036	17.3	6.4	5.4	2	2	2	4	4	4	2	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
IncA	PF04156.9	gi|15922443|ref|NP_378112.1|	-	0.0008	19.0	73.9	0.017	14.7	21.2	4.1	1	1	3	4	4	4	1	IncA	protein
HOOK	PF05622.7	gi|15922443|ref|NP_378112.1|	-	0.00087	17.2	56.7	0.0014	16.5	39.3	1.3	1	0	0	1	1	1	1	HOOK	protein
Filament	PF00038.16	gi|15922443|ref|NP_378112.1|	-	0.0015	18.0	64.9	1	8.7	17.3	4.0	1	1	3	4	4	4	2	Intermediate	filament	protein
Enkurin	PF13864.1	gi|15922443|ref|NP_378112.1|	-	0.0017	18.4	62.1	0.028	14.5	6.7	5.2	6	0	0	6	6	4	3	Calmodulin-binding
AAA_23	PF13476.1	gi|15922443|ref|NP_378112.1|	-	0.0033	17.7	89.5	1.5e+04	-24.1	61.5	4.6	1	1	0	1	1	0	0	AAA	domain
Seryl_tRNA_N	PF02403.17	gi|15922443|ref|NP_378112.1|	-	0.0047	16.9	70.0	0.039	13.9	7.9	5.0	3	1	1	4	4	4	2	Seryl-tRNA	synthetase	N-terminal	domain
NPV_P10	PF05531.7	gi|15922443|ref|NP_378112.1|	-	0.0077	16.4	36.4	0.4	10.9	1.0	6.6	2	2	3	5	5	5	2	Nucleopolyhedrovirus	P10	protein
Baculo_PEP_C	PF04513.7	gi|15922443|ref|NP_378112.1|	-	0.011	15.5	36.4	0.34	10.7	5.7	4.9	1	1	5	6	6	6	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
APG6	PF04111.7	gi|15922443|ref|NP_378112.1|	-	0.028	13.4	72.2	0.23	10.4	8.1	4.3	1	1	3	4	4	4	0	Autophagy	protein	Apg6
Myosin_tail_1	PF01576.14	gi|15922443|ref|NP_378112.1|	-	0.031	12.0	74.5	0.1	10.3	27.6	3.1	1	1	1	3	3	3	0	Myosin	tail
Atg14	PF10186.4	gi|15922443|ref|NP_378112.1|	-	0.13	11.1	67.9	2.1	7.1	16.2	4.1	2	2	1	3	3	3	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
GAS	PF13851.1	gi|15922443|ref|NP_378112.1|	-	0.25	10.5	76.8	0.15	11.2	11.8	4.3	1	1	3	4	4	4	0	Growth-arrest	specific	micro-tubule	binding
DUF869	PF05911.6	gi|15922443|ref|NP_378112.1|	-	0.27	9.4	55.6	1.1	7.3	38.3	2.0	1	1	0	1	1	1	0	Plant	protein	of	unknown	function	(DUF869)
PilJ	PF13675.1	gi|15922443|ref|NP_378112.1|	-	0.31	11.3	22.9	6.5	7.1	2.7	4.5	2	2	2	4	4	4	0	Type	IV	pili	methyl-accepting	chemotaxis	transducer	N-term
SMC_N	PF02463.14	gi|15922443|ref|NP_378112.1|	-	0.36	10.0	30.4	3.3	6.8	19.9	3.0	2	1	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
TBPIP	PF07106.8	gi|15922443|ref|NP_378112.1|	-	0.38	10.2	73.0	1.9	7.9	11.9	5.4	1	1	4	5	5	5	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
Tropomyosin_1	PF12718.2	gi|15922443|ref|NP_378112.1|	-	0.42	10.4	76.1	2	8.2	23.9	4.1	1	1	2	3	3	3	0	Tropomyosin	like
Reo_sigmaC	PF04582.7	gi|15922443|ref|NP_378112.1|	-	0.84	8.7	17.9	1.6	7.8	3.8	3.6	1	1	3	4	4	4	0	Reovirus	sigma	C	capsid	protein
M_domain	PF12938.2	gi|15922443|ref|NP_378112.1|	-	1.1	9.0	22.5	2.1	8.0	0.5	3.4	2	1	1	3	3	3	0	M	domain	of	GW182
Raptor_N	PF14538.1	gi|15922443|ref|NP_378112.1|	-	1.6	8.5	5.7	2.6	7.8	0.0	2.9	2	1	1	3	3	3	0	Raptor	N-terminal	CASPase	like	domain
Fib_alpha	PF08702.5	gi|15922443|ref|NP_378112.1|	-	2.7	8.0	53.0	0.67	10.0	8.2	4.1	1	1	3	4	4	4	0	Fibrinogen	alpha/beta	chain	family
Phage_GP20	PF06810.6	gi|15922443|ref|NP_378112.1|	-	3.4	7.0	70.8	1.1	8.6	10.7	5.4	1	1	4	5	5	5	0	Phage	minor	structural	protein	GP20
DUF3584	PF12128.3	gi|15922443|ref|NP_378112.1|	-	3.5	4.8	58.3	0.72	7.1	20.8	2.6	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF3584)
Lge1	PF11488.3	gi|15922443|ref|NP_378112.1|	-	7	6.9	56.6	0.97	9.6	0.8	8.0	2	2	5	7	7	6	0	Transcriptional	regulatory	protein	LGE1
Mod_r	PF07200.8	gi|15922443|ref|NP_378112.1|	-	7.1	6.5	61.0	1.3	8.8	7.9	4.7	2	2	2	4	4	4	0	Modifier	of	rudimentary	(Mod(r))	protein
Prefoldin_2	PF01920.15	gi|15922443|ref|NP_378112.1|	-	8.5	6.2	87.7	2.8	7.7	0.9	8.4	1	1	5	6	6	6	0	Prefoldin	subunit
Allexi_40kDa	PF05549.6	gi|15922443|ref|NP_378112.1|	-	9.8	5.3	42.9	2.7	7.2	1.4	4.3	2	2	2	4	4	4	0	Allexivirus	40kDa	protein
ATG16	PF08614.6	gi|15922443|ref|NP_378112.1|	-	9.9	5.9	72.1	0.75	9.5	2.8	4.4	1	1	3	4	4	4	0	Autophagy	protein	16	(ATG16)
CBS	PF00571.23	gi|15922445|ref|NP_378114.1|	-	6.7e-34	115.4	7.0	9.6e-18	63.7	0.3	2.1	2	0	0	2	2	2	2	CBS	domain
DisA_N	PF02457.11	gi|15922445|ref|NP_378114.1|	-	0.0049	16.0	0.1	0.0077	15.3	0.1	1.5	1	1	0	1	1	1	1	DisA	bacterial	checkpoint	controller	nucleotide-binding
Rad50_zn_hook	PF04423.9	gi|15922445|ref|NP_378114.1|	-	0.0059	16.0	0.0	0.013	14.9	0.0	1.5	1	0	0	1	1	1	1	Rad50	zinc	hook	motif
Ribosomal_L9_C	PF03948.9	gi|15922445|ref|NP_378114.1|	-	0.009	16.0	1.2	0.77	9.8	0.2	2.2	2	0	0	2	2	2	1	Ribosomal	protein	L9,	C-terminal	domain
MmoB_DmpM	PF02406.12	gi|15922445|ref|NP_378114.1|	-	0.024	14.6	0.7	0.041	13.8	0.5	1.5	1	0	0	1	1	1	0	MmoB/DmpM	family
DUF1840	PF08895.6	gi|15922445|ref|NP_378114.1|	-	0.05	13.6	0.3	1.7	8.7	0.0	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF1840)
Cache_3	PF14827.1	gi|15922445|ref|NP_378114.1|	-	0.084	12.7	2.1	1.6	8.6	1.5	2.2	1	1	0	1	1	1	0	Sensory	domain	of	two-component	sensor	kinase
DUF3659	PF12396.3	gi|15922445|ref|NP_378114.1|	-	0.13	11.9	3.8	5.9	6.6	0.6	3.0	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3659)
His_Phos_1	PF00300.17	gi|15922446|ref|NP_378115.1|	-	1.4e-28	99.9	0.0	1.7e-28	99.6	0.0	1.1	1	0	0	1	1	1	1	Histidine	phosphatase	superfamily	(branch	1)
tRNA_deacylase	PF04414.7	gi|15922447|ref|NP_378116.1|	-	1.6e-67	226.7	0.0	1.8e-67	226.5	0.0	1.0	1	0	0	1	1	1	1	D-aminoacyl-tRNA	deacylase
DAO	PF01266.19	gi|15922448|ref|NP_378117.1|	-	3.3e-12	45.9	0.0	9.5e-11	41.1	0.0	2.1	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Peptidase_S24	PF00717.18	gi|15922448|ref|NP_378117.1|	-	0.057	13.0	1.0	0.8	9.3	0.1	2.9	3	0	0	3	3	3	0	Peptidase	S24-like
Pyr_redox_2	PF07992.9	gi|15922448|ref|NP_378117.1|	-	0.13	12.1	2.9	0.58	9.9	1.9	2.1	1	1	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
Thioredoxin	PF00085.15	gi|15922449|ref|NP_378118.1|	-	2.8e-27	94.4	0.0	3.6e-27	94.0	0.0	1.1	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.1	gi|15922449|ref|NP_378118.1|	-	2.4e-08	34.1	0.0	1.9e-06	28.0	0.0	2.3	1	1	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin_8	PF13905.1	gi|15922449|ref|NP_378118.1|	-	1.6e-06	28.1	0.0	0.00052	20.0	0.0	2.5	2	1	1	3	3	3	2	Thioredoxin-like
Thioredoxin_9	PF14595.1	gi|15922449|ref|NP_378118.1|	-	4.9e-05	22.8	0.1	7.6e-05	22.2	0.0	1.4	1	1	0	1	1	1	1	Thioredoxin
HyaE	PF07449.6	gi|15922449|ref|NP_378118.1|	-	8.7e-05	22.3	0.0	0.00027	20.7	0.0	1.8	1	1	0	1	1	1	1	Hydrogenase-1	expression	protein	HyaE
Thioredoxin_3	PF13192.1	gi|15922449|ref|NP_378118.1|	-	0.00029	20.5	0.0	0.00056	19.6	0.0	1.5	1	1	0	1	1	1	1	Thioredoxin	domain
AhpC-TSA	PF00578.16	gi|15922449|ref|NP_378118.1|	-	0.00084	19.0	0.1	0.074	12.7	0.0	2.1	1	1	1	2	2	2	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|15922449|ref|NP_378118.1|	-	0.0026	17.3	0.0	0.0058	16.1	0.0	1.6	1	1	0	1	1	1	1	Redoxin
Phosducin	PF02114.11	gi|15922449|ref|NP_378118.1|	-	0.0083	14.8	0.0	0.0097	14.6	0.0	1.3	1	1	0	1	1	1	1	Phosducin
UL11	PF11094.3	gi|15922449|ref|NP_378118.1|	-	0.062	13.1	0.0	0.11	12.3	0.0	1.3	1	0	0	1	1	1	0	Membrane-associated	tegument	protein
NTPase_I-T	PF01931.13	gi|15922451|ref|NP_378120.1|	-	4.1e-41	140.5	0.1	4.5e-41	140.3	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF84
DUF3235	PF11574.3	gi|15922451|ref|NP_378120.1|	-	0.15	12.3	0.7	0.31	11.3	0.5	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3235)
VitK2_biosynth	PF02621.9	gi|15922452|ref|NP_378121.1|	-	5.7e-55	186.2	0.1	6.5e-55	186.0	0.0	1.0	1	0	0	1	1	1	1	Menaquinone	biosynthesis
DUF1444	PF07285.6	gi|15922452|ref|NP_378121.1|	-	0.0022	17.3	1.0	0.0022	17.3	0.7	1.8	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF1444)
Peptidase_M50	PF02163.17	gi|15922452|ref|NP_378121.1|	-	0.13	11.2	0.0	0.2	10.6	0.0	1.3	1	0	0	1	1	1	0	Peptidase	family	M50
Cytokin_check_N	PF10407.4	gi|15922453|ref|NP_378122.1|	-	0.02	14.5	0.1	4.7	6.8	0.0	2.4	2	0	0	2	2	2	0	Cdc14	phosphatase	binding	protein	N-terminus
DUF1217	PF06748.7	gi|15922454|ref|NP_378123.1|	-	0.0059	16.7	0.0	1.3	9.1	0.0	2.1	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF1217)
EMG1	PF03587.9	gi|15922455|ref|NP_378124.1|	-	1.2e-48	165.1	0.0	1.4e-48	164.9	0.0	1.0	1	0	0	1	1	1	1	EMG1/NEP1	methyltransferase
Rpr2	PF04032.11	gi|15922456|ref|NP_378125.1|	-	5.5e-19	67.8	0.8	7.8e-19	67.3	0.5	1.2	1	0	0	1	1	1	1	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
zf-BED	PF02892.10	gi|15922456|ref|NP_378125.1|	-	2.4	7.9	6.1	0.43	10.3	1.1	1.9	1	1	1	2	2	2	0	BED	zinc	finger
CRS1_YhbY	PF01985.16	gi|15922457|ref|NP_378126.1|	-	5.7e-19	67.9	5.4	6.7e-19	67.6	3.8	1.0	1	0	0	1	1	1	1	CRS1	/	YhbY	(CRM)	domain
DUF3928	PF13065.1	gi|15922457|ref|NP_378126.1|	-	0.0049	17.1	0.1	0.0052	17.0	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3928)
DUF775	PF05603.7	gi|15922457|ref|NP_378126.1|	-	0.017	14.6	0.3	0.018	14.5	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF775)
DUF3486	PF11985.3	gi|15922457|ref|NP_378126.1|	-	0.034	14.1	3.3	0.1	12.6	0.4	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3486)
DUF458	PF04308.7	gi|15922457|ref|NP_378126.1|	-	0.049	13.3	1.7	0.59	9.8	0.1	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF458)
DUF1949	PF09186.6	gi|15922457|ref|NP_378126.1|	-	0.067	12.8	0.1	0.15	11.6	0.0	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1949)
ParB	PF08775.5	gi|15922457|ref|NP_378126.1|	-	0.08	13.2	2.4	0.093	13.0	1.7	1.2	1	0	0	1	1	1	0	ParB	family
TBPIP_N	PF15517.1	gi|15922457|ref|NP_378126.1|	-	0.29	10.8	2.2	0.42	10.3	1.5	1.4	1	1	0	1	1	1	0	TBP-interacting	protein	N-terminus
DUF371	PF04027.8	gi|15922458|ref|NP_378127.1|	-	2e-53	179.5	0.4	2.3e-53	179.3	0.3	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF371)
DUF1395	PF07160.7	gi|15922458|ref|NP_378127.1|	-	0.0024	17.3	0.7	0.003	17.0	0.5	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1395)
tRNA-synt_1d	PF00750.14	gi|15922458|ref|NP_378127.1|	-	0.034	12.9	0.4	0.046	12.5	0.2	1.1	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(R)
Met_10	PF02475.11	gi|15922459|ref|NP_378128.1|	-	6.8e-31	107.4	0.5	9.9e-31	106.8	0.1	1.4	2	0	0	2	2	2	1	Met-10+	like-protein
Methyltransf_26	PF13659.1	gi|15922459|ref|NP_378128.1|	-	1.2e-05	25.2	0.0	1.8e-05	24.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|15922459|ref|NP_378128.1|	-	0.00093	19.6	0.0	0.0016	18.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|15922459|ref|NP_378128.1|	-	0.001	18.4	0.0	0.0017	17.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.1	gi|15922459|ref|NP_378128.1|	-	0.022	14.3	0.7	0.046	13.3	0.2	1.7	2	0	0	2	2	2	0	Methyltransferase	domain
TehB	PF03848.9	gi|15922459|ref|NP_378128.1|	-	0.042	13.0	0.1	0.062	12.4	0.1	1.3	1	0	0	1	1	1	0	Tellurite	resistance	protein	TehB
Methyltransf_18	PF12847.2	gi|15922459|ref|NP_378128.1|	-	0.046	14.2	0.0	0.091	13.3	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
UPF0020	PF01170.13	gi|15922459|ref|NP_378128.1|	-	0.048	13.2	0.0	0.1	12.1	0.0	1.5	1	0	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
Methyltransf_25	PF13649.1	gi|15922459|ref|NP_378128.1|	-	0.1	12.9	0.0	0.18	12.1	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
YoaP	PF14268.1	gi|15922459|ref|NP_378128.1|	-	0.31	10.2	1.9	0.45	9.7	0.1	2.0	2	0	0	2	2	2	0	YoaP-like
Pyr_redox_2	PF07992.9	gi|15922460|ref|NP_378129.1|	-	4.9e-23	82.0	0.5	6.2e-23	81.7	0.4	1.2	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|15922460|ref|NP_378129.1|	-	2.6e-20	73.3	0.9	5.1e-13	49.5	0.0	2.7	2	1	1	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|15922460|ref|NP_378129.1|	-	9.7e-13	48.3	0.1	3.1e-09	37.1	0.0	2.8	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
K_oxygenase	PF13434.1	gi|15922460|ref|NP_378129.1|	-	9.9e-11	41.1	0.1	1.3e-07	30.8	0.0	3.1	2	1	1	3	3	3	2	L-lysine	6-monooxygenase	(NADPH-requiring)
HI0933_like	PF03486.9	gi|15922460|ref|NP_378129.1|	-	2.3e-08	32.9	0.5	0.00079	18.0	0.1	3.5	4	0	0	4	4	4	2	HI0933-like	protein
NAD_binding_8	PF13450.1	gi|15922460|ref|NP_378129.1|	-	1e-06	28.6	0.2	5.1e-05	23.2	0.0	2.5	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
DAO	PF01266.19	gi|15922460|ref|NP_378129.1|	-	6.8e-05	21.9	1.5	0.033	13.0	0.0	3.1	1	1	1	3	3	3	1	FAD	dependent	oxidoreductase
NAD_binding_7	PF13241.1	gi|15922460|ref|NP_378129.1|	-	0.00014	22.0	3.0	0.00058	20.0	0.1	2.5	2	1	0	2	2	2	1	Putative	NAD(P)-binding
FAD_oxidored	PF12831.2	gi|15922460|ref|NP_378129.1|	-	0.00018	20.7	0.3	0.0025	16.9	0.0	2.5	3	0	0	3	3	3	1	FAD	dependent	oxidoreductase
FMO-like	PF00743.14	gi|15922460|ref|NP_378129.1|	-	0.00034	18.9	0.3	0.0012	17.2	0.0	1.8	1	1	1	2	2	2	1	Flavin-binding	monooxygenase-like
FAD_binding_2	PF00890.19	gi|15922460|ref|NP_378129.1|	-	0.0011	17.8	1.3	1.2	7.9	0.0	3.3	3	1	0	3	3	3	1	FAD	binding	domain
Thi4	PF01946.12	gi|15922460|ref|NP_378129.1|	-	0.0088	15.1	1.0	0.21	10.6	0.1	3.0	3	0	0	3	3	3	1	Thi4	family
GIDA	PF01134.17	gi|15922460|ref|NP_378129.1|	-	0.017	13.9	1.6	20	3.8	0.0	3.8	4	0	0	4	4	4	0	Glucose	inhibited	division	protein	A
Spermine_synth	PF01564.12	gi|15922460|ref|NP_378129.1|	-	0.04	12.8	0.2	0.1	11.4	0.1	1.7	2	0	0	2	2	2	0	Spermine/spermidine	synthase
Pribosyltran	PF00156.22	gi|15922460|ref|NP_378129.1|	-	0.071	12.8	0.0	0.2	11.3	0.0	1.7	1	0	0	1	1	1	0	Phosphoribosyl	transferase	domain
NAD_binding_9	PF13454.1	gi|15922460|ref|NP_378129.1|	-	0.087	12.5	2.4	12	5.6	0.0	3.4	3	1	1	4	4	4	0	FAD-NAD(P)-binding
Nup35_RRM_2	PF14605.1	gi|15922461|ref|NP_378130.1|	-	0.039	13.7	0.0	0.067	12.9	0.0	1.4	1	0	0	1	1	1	0	Nup53/35/40-type	RNA	recognition	motif
DHquinase_I	PF01487.10	gi|15922461|ref|NP_378130.1|	-	0.054	13.1	0.0	0.066	12.8	0.0	1.1	1	0	0	1	1	1	0	Type	I	3-dehydroquinase
NAD_kinase	PF01513.16	gi|15922463|ref|NP_378132.1|	-	5.6e-28	97.5	0.1	6.6e-28	97.2	0.1	1.0	1	0	0	1	1	1	1	ATP-NAD	kinase
Methyltransf_31	PF13847.1	gi|15922463|ref|NP_378132.1|	-	0.011	15.3	0.0	0.023	14.2	0.0	1.7	2	0	0	2	2	2	0	Methyltransferase	domain
DAGK_cat	PF00781.19	gi|15922463|ref|NP_378132.1|	-	0.026	13.9	0.0	0.059	12.8	0.0	1.6	1	0	0	1	1	1	0	Diacylglycerol	kinase	catalytic	domain
PIN	PF01850.16	gi|15922464|ref|NP_378133.1|	-	5.7e-05	23.4	0.6	0.0001	22.6	0.4	1.4	1	1	0	1	1	1	1	PIN	domain
zf-ribbon_3	PF13248.1	gi|15922464|ref|NP_378133.1|	-	0.00093	18.3	4.1	0.0014	17.7	2.8	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|15922464|ref|NP_378133.1|	-	0.0057	16.4	0.5	0.009	15.8	0.3	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
HypA	PF01155.14	gi|15922464|ref|NP_378133.1|	-	0.0092	15.6	0.5	0.013	15.1	0.4	1.6	1	1	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
zf-BED	PF02892.10	gi|15922464|ref|NP_378133.1|	-	0.025	14.3	5.6	0.11	12.2	2.4	2.3	1	1	1	2	2	2	0	BED	zinc	finger
NOB1_Zn_bind	PF08772.6	gi|15922464|ref|NP_378133.1|	-	0.026	14.3	2.8	0.026	14.3	1.9	1.8	2	0	0	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
zf-C3HC4_3	PF13920.1	gi|15922464|ref|NP_378133.1|	-	0.029	14.0	1.0	0.042	13.5	0.7	1.2	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
zf-C2H2_6	PF13912.1	gi|15922464|ref|NP_378133.1|	-	0.033	14.1	1.3	0.033	14.1	0.9	2.3	1	1	1	2	2	2	0	C2H2-type	zinc	finger
zf-ISL3	PF14690.1	gi|15922464|ref|NP_378133.1|	-	0.041	13.9	1.6	3.4	7.7	0.0	2.9	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
TF_Zn_Ribbon	PF08271.7	gi|15922464|ref|NP_378133.1|	-	0.047	13.0	2.1	6.6	6.1	0.1	2.5	1	1	0	2	2	2	0	TFIIB	zinc-binding
Prok-RING_1	PF14446.1	gi|15922464|ref|NP_378133.1|	-	0.048	13.4	0.5	0.072	12.8	0.4	1.3	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
zf-H2C2_2	PF13465.1	gi|15922464|ref|NP_378133.1|	-	0.055	13.7	0.7	0.055	13.7	0.5	2.3	2	0	0	2	2	2	0	Zinc-finger	double	domain
zf-C2H2	PF00096.21	gi|15922464|ref|NP_378133.1|	-	0.062	13.6	7.0	0.13	12.6	1.5	2.4	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
Zn_Tnp_IS1595	PF12760.2	gi|15922464|ref|NP_378133.1|	-	0.063	13.0	2.0	2	8.3	0.3	2.3	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
UPF0547	PF10571.4	gi|15922464|ref|NP_378133.1|	-	0.081	12.6	0.9	0.15	11.7	0.6	1.4	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
Cys_rich_CPXG	PF14255.1	gi|15922464|ref|NP_378133.1|	-	0.13	12.0	1.1	0.89	9.4	0.1	2.4	3	0	0	3	3	2	0	Cysteine-rich	CPXCG
CpXC	PF14353.1	gi|15922464|ref|NP_378133.1|	-	0.14	12.1	3.7	1.3	9.0	0.1	3.0	2	1	1	3	3	3	0	CpXC	protein
C1_3	PF07649.7	gi|15922464|ref|NP_378133.1|	-	0.15	12.1	3.7	0.24	11.4	2.5	1.3	1	0	0	1	1	1	0	C1-like	domain
Zn-ribbon_8	PF09723.5	gi|15922464|ref|NP_378133.1|	-	0.19	11.6	5.4	1.6	8.7	3.8	2.1	1	1	0	1	1	1	0	Zinc	ribbon	domain
DUF3797	PF12677.2	gi|15922464|ref|NP_378133.1|	-	0.2	11.3	0.2	0.2	11.3	0.1	2.6	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF3797)
zinc_ribbon_5	PF13719.1	gi|15922464|ref|NP_378133.1|	-	0.25	10.9	2.7	2.9	7.5	0.4	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-C2H2_jaz	PF12171.3	gi|15922464|ref|NP_378133.1|	-	0.27	11.4	0.6	0.27	11.4	0.4	2.5	3	0	0	3	3	3	0	Zinc-finger	double-stranded	RNA-binding
PyrI_C	PF02748.10	gi|15922464|ref|NP_378133.1|	-	0.48	9.8	3.5	1.6	8.2	0.3	2.3	1	1	1	2	2	2	0	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
zinc_ribbon_4	PF13717.1	gi|15922464|ref|NP_378133.1|	-	0.52	10.0	3.1	2.5	7.8	0.4	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|15922464|ref|NP_378133.1|	-	2.2	7.8	7.3	15	5.2	5.1	2.1	1	1	0	1	1	1	0	zinc-ribbon	domain
Arc_trans_TRASH	PF08394.5	gi|15922464|ref|NP_378133.1|	-	7.7	6.7	9.2	10	6.4	0.4	2.8	3	0	0	3	3	2	0	Archaeal	TRASH	domain
zf-C2H2_4	PF13894.1	gi|15922464|ref|NP_378133.1|	-	9.4	6.8	7.3	4.7	7.7	0.4	2.4	1	1	1	2	2	2	0	C2H2-type	zinc	finger
AMP-binding	PF00501.23	gi|15922466|ref|NP_378135.1|	-	8.8e-73	245.0	0.0	1.1e-72	244.7	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|15922466|ref|NP_378135.1|	-	3e-16	60.1	0.3	5.8e-16	59.1	0.2	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
Aminotran_5	PF00266.14	gi|15922467|ref|NP_378136.1|	-	4.3e-47	160.6	0.0	6.5e-47	160.0	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class-V
Aminotran_1_2	PF00155.16	gi|15922467|ref|NP_378136.1|	-	9.9e-06	24.7	0.0	0.0057	15.6	0.0	2.0	2	0	0	2	2	2	2	Aminotransferase	class	I	and	II
Cys_Met_Meta_PP	PF01053.15	gi|15922467|ref|NP_378136.1|	-	0.00072	17.9	0.0	0.0015	16.8	0.0	1.4	2	0	0	2	2	2	1	Cys/Met	metabolism	PLP-dependent	enzyme
DegT_DnrJ_EryC1	PF01041.12	gi|15922467|ref|NP_378136.1|	-	0.0012	18.0	0.0	0.0022	17.0	0.0	1.3	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
DUF4468	PF14730.1	gi|15922467|ref|NP_378136.1|	-	0.072	12.7	0.1	0.16	11.7	0.1	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4468)	with	TBP-like	fold
TA0956	PF11513.3	gi|15922467|ref|NP_378136.1|	-	0.39	10.7	3.1	4.2	7.4	0.0	2.9	3	1	0	3	3	3	0	Thermoplasma	acidophilum	protein	TA0956
PhoU	PF01895.14	gi|15922468|ref|NP_378137.1|	-	0.063	13.7	0.6	0.1	13.0	0.4	1.3	1	0	0	1	1	1	0	PhoU	domain
DUF3414	PF11894.3	gi|15922469|ref|NP_378138.1|	-	0.12	9.2	0.0	0.16	8.7	0.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3414)
Calcipressin	PF04847.7	gi|15922469|ref|NP_378138.1|	-	0.17	11.4	1.0	0.24	10.9	0.7	1.2	1	0	0	1	1	1	0	Calcipressin
DBI_PRT	PF02277.12	gi|15922470|ref|NP_378139.1|	-	6.3e-33	114.2	0.1	1.1e-32	113.5	0.1	1.3	1	0	0	1	1	1	1	Phosphoribosyltransferase
LcnG-beta	PF11632.3	gi|15922470|ref|NP_378139.1|	-	0.12	12.1	2.0	2.4	7.9	0.1	2.7	2	0	0	2	2	2	0	Lactococcin	G-beta
z-alpha	PF02295.12	gi|15922471|ref|NP_378140.1|	-	0.00043	20.0	0.3	0.00081	19.1	0.2	1.4	1	0	0	1	1	1	1	Adenosine	deaminase	z-alpha	domain
HypA	PF01155.14	gi|15922471|ref|NP_378140.1|	-	0.0023	17.5	0.1	0.0031	17.2	0.1	1.3	1	0	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
Sigma70_r4	PF04545.11	gi|15922471|ref|NP_378140.1|	-	0.0063	15.7	0.0	0.0088	15.3	0.0	1.2	1	0	0	1	1	1	1	Sigma-70,	region	4
IBR	PF01485.16	gi|15922471|ref|NP_378140.1|	-	0.0095	15.7	0.6	0.012	15.4	0.4	1.2	1	0	0	1	1	1	1	IBR	domain
DUF1187	PF06688.6	gi|15922471|ref|NP_378140.1|	-	0.016	15.2	0.0	0.027	14.6	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1187)
ADK_lid	PF05191.9	gi|15922471|ref|NP_378140.1|	-	0.025	14.2	2.2	0.025	14.2	1.5	1.7	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
TF_Zn_Ribbon	PF08271.7	gi|15922471|ref|NP_378140.1|	-	0.033	13.5	0.9	0.89	8.9	0.2	2.3	2	0	0	2	2	2	0	TFIIB	zinc-binding
DZR	PF12773.2	gi|15922471|ref|NP_378140.1|	-	0.035	13.9	0.5	0.058	13.2	0.4	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
DUF3490	PF11995.3	gi|15922471|ref|NP_378140.1|	-	0.042	13.4	0.2	0.052	13.1	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3490)
TrmB	PF01978.14	gi|15922471|ref|NP_378140.1|	-	0.083	12.6	0.1	0.13	11.9	0.1	1.3	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
zinc_ribbon_6	PF14599.1	gi|15922471|ref|NP_378140.1|	-	0.086	12.6	1.4	0.14	12.0	0.9	1.3	1	0	0	1	1	1	0	Zinc-ribbon
HTH_20	PF12840.2	gi|15922471|ref|NP_378140.1|	-	0.14	12.0	0.0	0.19	11.5	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|15922471|ref|NP_378140.1|	-	0.15	11.7	0.2	0.21	11.2	0.1	1.2	1	0	0	1	1	1	0	HTH	domain
Zn-ribbon_8	PF09723.5	gi|15922471|ref|NP_378140.1|	-	0.18	11.7	4.1	0.95	9.4	2.8	2.1	1	1	0	1	1	1	0	Zinc	ribbon	domain
zf-ribbon_3	PF13248.1	gi|15922471|ref|NP_378140.1|	-	0.19	10.9	2.2	11	5.3	0.0	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
PhnA_Zn_Ribbon	PF08274.7	gi|15922471|ref|NP_378140.1|	-	0.63	9.8	5.0	7.3	6.4	3.5	2.2	1	1	0	1	1	1	0	PhnA	Zinc-Ribbon
UPF0547	PF10571.4	gi|15922471|ref|NP_378140.1|	-	0.81	9.4	5.2	2.9	7.6	0.1	2.4	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
HAD_2	PF13419.1	gi|15922472|ref|NP_378141.1|	-	2.1e-22	80.1	0.0	2.6e-22	79.8	0.0	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|15922472|ref|NP_378141.1|	-	2.1e-06	27.3	0.0	6.2e-06	25.8	0.0	1.8	1	1	0	1	1	1	1	HAD-hyrolase-like
Hydrolase	PF00702.21	gi|15922472|ref|NP_378141.1|	-	1.2e-05	25.7	0.0	2e-05	25.1	0.0	1.5	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.2	gi|15922472|ref|NP_378141.1|	-	0.0098	16.0	0.0	0.0098	16.0	0.0	1.2	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_6	PF13344.1	gi|15922472|ref|NP_378141.1|	-	0.014	15.2	0.0	0.028	14.2	0.0	1.5	1	0	0	1	1	1	0	Haloacid	dehalogenase-like	hydrolase
PNK3P	PF08645.6	gi|15922472|ref|NP_378141.1|	-	0.098	12.0	0.0	0.2	11.0	0.0	1.5	2	0	0	2	2	2	0	Polynucleotide	kinase	3	phosphatase
Methyltransf_31	PF13847.1	gi|15922473|ref|NP_378142.1|	-	3.9e-10	39.5	0.3	4.5e-10	39.2	0.2	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|15922473|ref|NP_378142.1|	-	1.6e-09	37.3	0.0	1.9e-09	37.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_26	PF13659.1	gi|15922473|ref|NP_378142.1|	-	2e-08	34.2	0.0	2.4e-08	34.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|15922473|ref|NP_378142.1|	-	1.5e-06	28.7	0.0	1.8e-06	28.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|15922473|ref|NP_378142.1|	-	2.5e-06	27.7	0.0	9e-06	25.9	0.0	1.8	1	1	1	2	2	2	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|15922473|ref|NP_378142.1|	-	5.1e-05	23.6	0.0	9.9e-05	22.7	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
TehB	PF03848.9	gi|15922473|ref|NP_378142.1|	-	0.00064	18.9	0.4	0.0011	18.2	0.1	1.4	2	0	0	2	2	2	1	Tellurite	resistance	protein	TehB
PrmA	PF06325.8	gi|15922473|ref|NP_378142.1|	-	0.00077	18.6	0.1	0.0015	17.6	0.0	1.4	2	0	0	2	2	2	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_12	PF08242.7	gi|15922473|ref|NP_378142.1|	-	0.0071	16.7	0.1	0.011	16.1	0.1	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
AAA_21	PF13304.1	gi|15922473|ref|NP_378142.1|	-	0.01	15.8	3.1	0.013	15.4	2.2	1.1	1	0	0	1	1	1	0	AAA	domain
DUF43	PF01861.11	gi|15922473|ref|NP_378142.1|	-	0.022	13.7	0.1	0.03	13.2	0.1	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	DUF43
Methyltransf_4	PF02390.12	gi|15922473|ref|NP_378142.1|	-	0.038	13.0	0.1	0.038	13.0	0.1	1.9	2	1	0	2	2	2	0	Putative	methyltransferase
UPF0020	PF01170.13	gi|15922473|ref|NP_378142.1|	-	0.058	12.9	0.0	0.076	12.5	0.0	1.3	1	0	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
Methyltransf_23	PF13489.1	gi|15922473|ref|NP_378142.1|	-	0.13	11.9	0.0	0.14	11.8	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
Hydrolase_3	PF08282.7	gi|15922474|ref|NP_378143.1|	-	3.6e-23	82.4	5.7	6.6e-17	61.9	1.3	2.0	1	1	1	2	2	2	2	haloacid	dehalogenase-like	hydrolase
S6PP	PF05116.8	gi|15922474|ref|NP_378143.1|	-	4.6e-10	39.2	0.1	4e-06	26.3	0.0	2.1	2	0	0	2	2	2	2	Sucrose-6F-phosphate	phosphohydrolase
HAD	PF12710.2	gi|15922474|ref|NP_378143.1|	-	0.0027	17.9	0.6	0.011	15.9	0.4	1.9	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
DUF1125	PF06563.6	gi|15922474|ref|NP_378143.1|	-	0.034	13.8	1.2	0.14	11.8	0.1	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1125)
AP_endonuc_2	PF01261.19	gi|15922475|ref|NP_378144.1|	-	4.2e-22	78.4	0.1	5.6e-22	78.0	0.1	1.1	1	0	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
UvdE	PF03851.9	gi|15922475|ref|NP_378144.1|	-	0.00067	18.7	0.0	0.00099	18.2	0.0	1.2	1	0	0	1	1	1	1	UV-endonuclease	UvdE
Decorin_bind	PF02352.10	gi|15922475|ref|NP_378144.1|	-	0.11	12.4	2.9	0.18	11.7	0.1	2.4	2	1	1	3	3	3	0	Decorin	binding	protein
FAD_binding_4	PF01565.18	gi|15922476|ref|NP_378145.1|	-	4e-34	117.0	0.0	8.6e-34	115.9	0.0	1.6	1	0	0	1	1	1	1	FAD	binding	domain
Fer4_17	PF13534.1	gi|15922476|ref|NP_378145.1|	-	2.6e-08	34.0	1.6	5.1e-08	33.1	1.1	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|15922476|ref|NP_378145.1|	-	6.1e-08	32.5	1.5	1.3e-07	31.4	1.0	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|15922476|ref|NP_378145.1|	-	5.9e-07	29.8	2.7	0.017	15.5	0.0	2.6	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|15922476|ref|NP_378145.1|	-	2.5e-06	27.1	5.2	3.9e-05	23.3	4.7	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|15922476|ref|NP_378145.1|	-	2.8e-06	27.5	0.3	0.018	15.2	0.0	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|15922476|ref|NP_378145.1|	-	2.5e-05	24.5	5.0	6.1e-05	23.3	3.5	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
IZUMO	PF15005.1	gi|15922476|ref|NP_378145.1|	-	0.00097	19.2	0.3	0.00097	19.2	0.2	2.0	2	0	0	2	2	2	1	Izumo	sperm-egg	fusion
DUF2397	PF09660.5	gi|15922476|ref|NP_378145.1|	-	0.0013	17.3	0.2	0.0021	16.7	0.2	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2397)
Fer4_21	PF14697.1	gi|15922476|ref|NP_378145.1|	-	0.0024	17.7	5.9	0.12	12.2	0.2	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
FAD-oxidase_C	PF02913.14	gi|15922476|ref|NP_378145.1|	-	0.0025	17.1	0.0	0.025	13.9	0.0	2.4	1	1	0	1	1	1	1	FAD	linked	oxidases,	C-terminal	domain
Fer4_2	PF12797.2	gi|15922476|ref|NP_378145.1|	-	0.023	14.5	12.1	0.028	14.3	1.3	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4	PF00037.22	gi|15922476|ref|NP_378145.1|	-	0.038	13.5	16.7	0.15	11.7	2.7	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|15922476|ref|NP_378145.1|	-	0.16	12.7	9.4	1.1	10.0	6.6	2.2	1	1	1	2	2	2	0	4Fe-4S	double	cluster	binding	domain
Fer4_3	PF12798.2	gi|15922476|ref|NP_378145.1|	-	3.5	8.4	18.6	1.5	9.5	3.7	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_13	PF13370.1	gi|15922476|ref|NP_378145.1|	-	6.9	7.1	12.4	3.1	8.2	2.0	2.5	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
HIT	PF01230.18	gi|15922477|ref|NP_378146.1|	-	1.1e-24	86.7	0.0	1.9e-24	86.0	0.0	1.4	2	0	0	2	2	2	1	HIT	domain
DcpS_C	PF11969.3	gi|15922477|ref|NP_378146.1|	-	5.5e-15	55.6	0.1	1.9e-14	53.8	0.0	1.7	2	0	0	2	2	2	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
CwfJ_C_1	PF04677.10	gi|15922477|ref|NP_378146.1|	-	0.0025	17.4	0.1	0.0043	16.6	0.1	1.5	1	1	0	1	1	1	1	Protein	similar	to	CwfJ	C-terminus	1
Imm28	PF15574.1	gi|15922477|ref|NP_378146.1|	-	0.066	12.7	0.0	0.18	11.3	0.0	1.7	1	0	0	1	1	1	0	Immunity	protein	28
SNARE_assoc	PF09335.6	gi|15922478|ref|NP_378147.1|	-	0.0039	17.4	4.3	0.0062	16.7	1.8	2.2	2	1	0	2	2	2	1	SNARE	associated	Golgi	protein
NUDIX	PF00293.23	gi|15922479|ref|NP_378148.1|	-	3.5e-21	75.2	0.0	4.3e-21	74.9	0.0	1.1	1	0	0	1	1	1	1	NUDIX	domain
Chlor_dismutase	PF06778.7	gi|15922480|ref|NP_378149.1|	-	1.9e-55	187.6	1.4	1.3e-54	184.8	0.1	1.9	1	1	1	2	2	2	2	Chlorite	dismutase
BtpA	PF03437.10	gi|15922481|ref|NP_378150.1|	-	5e-77	258.5	0.1	5.7e-77	258.4	0.1	1.0	1	0	0	1	1	1	1	BtpA	family
PcrB	PF01884.12	gi|15922481|ref|NP_378150.1|	-	0.014	14.6	0.0	0.024	13.8	0.0	1.4	1	0	0	1	1	1	0	PcrB	family
NTPase_1	PF03266.10	gi|15922482|ref|NP_378151.1|	-	3.5e-29	101.6	1.2	4e-29	101.4	0.8	1.0	1	0	0	1	1	1	1	NTPase
UPF0228	PF05727.6	gi|15922482|ref|NP_378151.1|	-	0.011	15.4	3.3	1.1	9.0	2.1	2.2	1	1	0	1	1	1	0	Uncharacterised	protein	family	(UPF0228)
DUF2029	PF09594.5	gi|15922483|ref|NP_378152.1|	-	0.012	15.0	10.5	0.022	14.2	7.2	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2029)
DUF2244	PF10003.4	gi|15922483|ref|NP_378152.1|	-	0.092	12.1	1.2	20	4.5	0.0	3.2	2	1	1	3	3	3	0	Integral	membrane	protein	(DUF2244)
NAD_synthase	PF02540.12	gi|15922484|ref|NP_378153.1|	-	1.7e-74	249.7	0.1	2e-74	249.5	0.1	1.0	1	0	0	1	1	1	1	NAD	synthase
Asn_synthase	PF00733.16	gi|15922484|ref|NP_378153.1|	-	8.6e-05	22.1	0.0	8.9e-05	22.1	0.0	1.1	1	0	0	1	1	1	1	Asparagine	synthase
tRNA_Me_trans	PF03054.11	gi|15922484|ref|NP_378153.1|	-	0.00011	20.8	0.0	0.0032	16.0	0.0	2.2	2	0	0	2	2	2	1	tRNA	methyl	transferase
ThiI	PF02568.9	gi|15922484|ref|NP_378153.1|	-	0.00013	21.5	0.1	0.00026	20.5	0.0	1.5	1	0	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
QueC	PF06508.8	gi|15922484|ref|NP_378153.1|	-	0.0057	15.9	0.0	0.015	14.5	0.0	1.7	2	0	0	2	2	2	1	Queuosine	biosynthesis	protein	QueC
DUF4295	PF14128.1	gi|15922484|ref|NP_378153.1|	-	1.6	8.3	4.2	9.4	5.9	0.4	2.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4295)
CN_hydrolase	PF00795.17	gi|15922485|ref|NP_378154.1|	-	5.7e-12	45.3	0.0	1e-11	44.5	0.0	1.4	2	0	0	2	2	2	1	Carbon-nitrogen	hydrolase
PaaA_PaaC	PF05138.7	gi|15922485|ref|NP_378154.1|	-	0.094	11.6	0.0	0.15	10.9	0.0	1.2	1	0	0	1	1	1	0	Phenylacetic	acid	catabolic	protein
HTH_5	PF01022.15	gi|15922486|ref|NP_378155.1|	-	1.2e-10	40.8	0.0	2e-10	40.1	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|15922486|ref|NP_378155.1|	-	7.2e-09	35.3	0.0	8.4e-09	35.1	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|15922486|ref|NP_378155.1|	-	1.1e-08	34.6	0.4	1.5e-08	34.1	0.3	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_45	PF14947.1	gi|15922486|ref|NP_378155.1|	-	6.6e-07	29.0	3.6	8.2e-07	28.7	2.5	1.1	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_11	PF08279.7	gi|15922486|ref|NP_378155.1|	-	2.4e-05	23.8	0.3	3.2e-05	23.5	0.2	1.2	1	0	0	1	1	1	1	HTH	domain
HTH_24	PF13412.1	gi|15922486|ref|NP_378155.1|	-	3.3e-05	23.1	0.4	0.00026	20.3	0.2	2.1	1	1	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
Rrf2	PF02082.15	gi|15922486|ref|NP_378155.1|	-	7e-05	22.8	0.1	9.4e-05	22.4	0.0	1.1	1	0	0	1	1	1	1	Transcriptional	regulator
Phage_rep_org_N	PF09681.5	gi|15922486|ref|NP_378155.1|	-	8.1e-05	22.1	0.2	9.7e-05	21.9	0.1	1.1	1	0	0	1	1	1	1	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
HrcA_DNA-bdg	PF03444.10	gi|15922486|ref|NP_378155.1|	-	0.00012	21.4	0.0	0.00015	21.1	0.0	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
HTH_29	PF13551.1	gi|15922486|ref|NP_378155.1|	-	0.00017	21.7	0.0	0.00019	21.5	0.0	1.2	1	0	0	1	1	1	1	Winged	helix-turn	helix
GerE	PF00196.14	gi|15922486|ref|NP_378155.1|	-	0.00041	19.6	0.0	0.00061	19.0	0.0	1.2	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	luxR	family
HTH_27	PF13463.1	gi|15922486|ref|NP_378155.1|	-	0.001	19.3	0.0	0.0016	18.7	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_28	PF13518.1	gi|15922486|ref|NP_378155.1|	-	0.0014	18.5	0.1	0.0022	17.9	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR	PF01047.17	gi|15922486|ref|NP_378155.1|	-	0.0019	17.8	0.0	0.0026	17.4	0.0	1.2	1	0	0	1	1	1	1	MarR	family
DUF2250	PF10007.4	gi|15922486|ref|NP_378155.1|	-	0.0038	17.0	1.4	0.067	13.1	0.9	2.1	1	1	1	2	2	2	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_34	PF13601.1	gi|15922486|ref|NP_378155.1|	-	0.004	17.1	0.3	0.0046	16.9	0.2	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_38	PF13936.1	gi|15922486|ref|NP_378155.1|	-	0.0053	16.2	0.0	0.0084	15.6	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
DUF4423	PF14394.1	gi|15922486|ref|NP_378155.1|	-	0.0054	16.2	0.0	0.0064	16.0	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
MarR_2	PF12802.2	gi|15922486|ref|NP_378155.1|	-	0.0072	15.9	0.0	0.0081	15.8	0.0	1.1	1	0	0	1	1	1	1	MarR	family
DUF2513	PF10711.4	gi|15922486|ref|NP_378155.1|	-	0.01	15.9	0.2	0.013	15.5	0.1	1.2	1	1	0	1	1	1	1	Hypothetical	protein	(DUF2513)
HTH_23	PF13384.1	gi|15922486|ref|NP_378155.1|	-	0.012	15.2	0.0	0.021	14.4	0.0	1.4	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_IclR	PF09339.5	gi|15922486|ref|NP_378155.1|	-	0.013	15.0	0.0	0.019	14.5	0.0	1.2	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|15922486|ref|NP_378155.1|	-	0.014	14.8	0.0	0.027	13.9	0.0	1.5	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_12	PF08461.5	gi|15922486|ref|NP_378155.1|	-	0.015	14.9	0.3	0.024	14.3	0.2	1.4	1	0	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
DUF2089	PF09862.4	gi|15922486|ref|NP_378155.1|	-	0.017	14.8	0.1	0.019	14.7	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2089)
Fe_dep_repress	PF01325.14	gi|15922486|ref|NP_378155.1|	-	0.022	14.7	0.0	0.033	14.1	0.0	1.2	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
TFIIE_alpha	PF02002.12	gi|15922486|ref|NP_378155.1|	-	0.031	13.7	0.6	0.039	13.4	0.4	1.3	1	1	0	1	1	1	0	TFIIE	alpha	subunit
HTH_30	PF13556.1	gi|15922486|ref|NP_378155.1|	-	0.038	13.5	0.2	0.061	12.9	0.1	1.4	1	1	0	1	1	1	0	PucR	C-terminal	helix-turn-helix	domain
Penicillinase_R	PF03965.11	gi|15922486|ref|NP_378155.1|	-	0.044	13.8	0.3	0.055	13.5	0.2	1.2	1	0	0	1	1	1	0	Penicillinase	repressor
FaeA	PF04703.7	gi|15922486|ref|NP_378155.1|	-	0.045	13.9	0.1	0.06	13.5	0.1	1.2	1	0	0	1	1	1	0	FaeA-like	protein
Intein_splicing	PF14890.1	gi|15922486|ref|NP_378155.1|	-	0.09	11.6	1.0	0.13	11.1	0.5	1.3	1	1	0	1	1	1	0	Intein	splicing	domain
GntR	PF00392.16	gi|15922486|ref|NP_378155.1|	-	0.11	11.9	0.0	0.15	11.4	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
LexA_DNA_bind	PF01726.11	gi|15922486|ref|NP_378155.1|	-	0.14	11.7	0.0	0.24	10.9	0.0	1.5	1	1	0	1	1	1	0	LexA	DNA	binding	domain
HTH_36	PF13730.1	gi|15922486|ref|NP_378155.1|	-	0.18	11.9	1.0	0.47	10.6	0.1	2.0	2	0	0	2	2	2	0	Helix-turn-helix	domain
PAH	PF02671.16	gi|15922486|ref|NP_378155.1|	-	0.21	11.2	1.4	1	8.9	0.1	2.2	1	1	1	2	2	2	0	Paired	amphipathic	helix	repeat
HmuY	PF14064.1	gi|15922487|ref|NP_378156.1|	-	0.054	13.4	0.0	0.15	12.0	0.0	1.6	1	1	0	2	2	2	0	HmuY	protein
Baculo_gp41	PF04700.7	gi|15922488|ref|NP_378157.1|	-	0.033	13.6	1.0	0.11	11.9	0.6	1.9	2	0	0	2	2	2	0	Structural	glycoprotein	p40/gp41	conserved	region
VASP_tetra	PF08776.6	gi|15922488|ref|NP_378157.1|	-	0.096	12.0	0.6	0.23	10.8	0.4	1.7	1	0	0	1	1	1	0	VASP	tetramerisation	domain
tify	PF06200.9	gi|15922488|ref|NP_378157.1|	-	0.16	11.2	0.7	0.27	10.5	0.5	1.3	1	0	0	1	1	1	0	tify	domain
Pterin_4a	PF01329.14	gi|15922489|ref|NP_378158.1|	-	1.2e-31	108.3	0.1	1.3e-31	108.2	0.1	1.0	1	0	0	1	1	1	1	Pterin	4	alpha	carbinolamine	dehydratase
DUF2450	PF10475.4	gi|15922489|ref|NP_378158.1|	-	0.096	11.5	0.0	0.096	11.5	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	N-terminal	domain	(DUF2450)
TM_helix	PF05552.7	gi|15922490|ref|NP_378159.1|	-	5.2e-16	58.0	9.1	7.8e-11	41.4	0.6	4.8	6	0	0	6	6	6	2	Conserved	TM	helix
NDUF_B12	PF08122.7	gi|15922490|ref|NP_378159.1|	-	0.26	11.0	0.9	1.5	8.6	0.2	2.4	2	0	0	2	2	2	0	NADH-ubiquinone	oxidoreductase	B12	subunit	family
Snapin_Pallidin	PF14712.1	gi|15922491|ref|NP_378160.1|	-	0.00065	19.9	0.8	0.00065	19.9	0.5	2.1	2	0	0	2	2	2	1	Snapin/Pallidin
DivIC	PF04977.10	gi|15922491|ref|NP_378160.1|	-	0.0024	17.3	1.8	0.0024	17.3	1.2	2.1	2	0	0	2	2	2	1	Septum	formation	initiator
DASH_Dad2	PF08654.5	gi|15922491|ref|NP_378160.1|	-	0.0027	17.6	1.0	0.099	12.6	0.3	2.1	2	0	0	2	2	2	1	DASH	complex	subunit	Dad2
TMF_DNA_bd	PF12329.3	gi|15922491|ref|NP_378160.1|	-	0.005	16.6	3.4	0.005	16.6	2.3	2.2	2	0	0	2	2	2	1	TATA	element	modulatory	factor	1	DNA	binding
NPV_P10	PF05531.7	gi|15922491|ref|NP_378160.1|	-	0.0055	16.9	2.4	0.58	10.4	0.1	2.1	2	0	0	2	2	2	1	Nucleopolyhedrovirus	P10	protein
Imm29	PF15575.1	gi|15922491|ref|NP_378160.1|	-	0.0069	16.0	0.6	0.0085	15.7	0.4	1.1	1	0	0	1	1	1	1	Immunity	protein	29
V-SNARE	PF05008.10	gi|15922491|ref|NP_378160.1|	-	0.009	16.1	7.9	0.59	10.3	1.1	2.4	2	1	0	2	2	2	2	Vesicle	transport	v-SNARE	protein	N-terminus
Tropomyosin_1	PF12718.2	gi|15922491|ref|NP_378160.1|	-	0.016	15.0	2.9	0.016	15.0	2.0	2.1	2	0	0	2	2	2	0	Tropomyosin	like
GOLGA2L5	PF15070.1	gi|15922491|ref|NP_378160.1|	-	0.02	13.4	4.1	0.023	13.2	2.9	1.1	1	0	0	1	1	1	0	Putative	golgin	subfamily	A	member	2-like	protein	5
FlxA	PF14282.1	gi|15922491|ref|NP_378160.1|	-	0.022	14.6	10.8	0.092	12.7	2.4	2.1	2	0	0	2	2	2	0	FlxA-like	protein
IncA	PF04156.9	gi|15922491|ref|NP_378160.1|	-	0.026	14.1	9.8	0.034	13.7	6.8	1.1	1	0	0	1	1	1	0	IncA	protein
SSV1_ORF_D-335	PF07935.6	gi|15922491|ref|NP_378160.1|	-	0.028	14.1	1.1	0.049	13.3	0.7	1.5	1	0	0	1	1	1	0	ORF	D-335-like	protein
ORF6C	PF10552.4	gi|15922491|ref|NP_378160.1|	-	0.033	13.9	10.8	0.17	11.5	7.3	1.9	1	1	0	1	1	1	0	ORF6C	domain
DUF2360	PF10152.4	gi|15922491|ref|NP_378160.1|	-	0.035	14.3	0.7	0.045	14.0	0.5	1.3	1	1	0	1	1	1	0	Predicted	coiled-coil	domain-containing	protein	(DUF2360)
phiKZ_IP	PF12699.2	gi|15922491|ref|NP_378160.1|	-	0.036	13.0	6.0	0.069	12.0	0.2	2.0	2	0	0	2	2	2	0	phiKZ-like	phage	internal	head	proteins
AAA_13	PF13166.1	gi|15922491|ref|NP_378160.1|	-	0.04	12.3	9.5	0.074	11.4	6.6	1.4	1	1	0	1	1	1	0	AAA	domain
Plasmodium_Vir	PF05795.6	gi|15922491|ref|NP_378160.1|	-	0.041	13.0	10.9	0.051	12.7	7.5	1.1	1	0	0	1	1	1	0	Plasmodium	vivax	Vir	protein
Spectrin	PF00435.16	gi|15922491|ref|NP_378160.1|	-	0.044	14.0	5.2	0.48	10.7	0.5	2.1	2	0	0	2	2	2	0	Spectrin	repeat
DUF4102	PF13356.1	gi|15922491|ref|NP_378160.1|	-	0.052	13.4	0.3	0.074	12.9	0.2	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4102)
Sipho_Gp157	PF05565.6	gi|15922491|ref|NP_378160.1|	-	0.055	13.0	1.3	0.055	13.0	0.9	2.2	2	0	0	2	2	2	0	Siphovirus	Gp157
CENP-F_leu_zip	PF10473.4	gi|15922491|ref|NP_378160.1|	-	0.059	13.2	8.3	0.39	10.5	1.4	2.1	2	0	0	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Med4	PF10018.4	gi|15922491|ref|NP_378160.1|	-	0.061	12.7	0.5	0.061	12.7	0.3	2.0	2	0	0	2	2	2	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
THDPS_N_2	PF14805.1	gi|15922491|ref|NP_378160.1|	-	0.062	13.1	0.9	7.2	6.5	0.2	2.1	2	0	0	2	2	2	0	Tetrahydrodipicolinate	N-succinyltransferase	N-terminal
WXG100	PF06013.7	gi|15922491|ref|NP_378160.1|	-	0.066	13.2	1.3	2.6	8.1	0.1	2.7	2	1	1	3	3	3	0	Proteins	of	100	residues	with	WXG
DUF2802	PF10975.3	gi|15922491|ref|NP_378160.1|	-	0.071	12.8	2.9	0.14	11.9	0.4	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2802)
Nsp1_C	PF05064.8	gi|15922491|ref|NP_378160.1|	-	0.077	12.6	7.3	0.099	12.2	1.0	2.2	2	0	0	2	2	2	0	Nsp1-like	C-terminal	region
DUF964	PF06133.6	gi|15922491|ref|NP_378160.1|	-	0.099	12.6	10.4	2.7	8.0	7.2	2.1	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF964)
DUF3585	PF12130.3	gi|15922491|ref|NP_378160.1|	-	0.11	12.3	10.4	0.94	9.3	7.2	2.0	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3585)
DUF4407	PF14362.1	gi|15922491|ref|NP_378160.1|	-	0.11	11.3	0.3	0.14	11.0	0.2	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
DUF4140	PF13600.1	gi|15922491|ref|NP_378160.1|	-	0.14	12.6	4.8	0.3	11.5	0.4	2.1	2	0	0	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
BLOC1_2	PF10046.4	gi|15922491|ref|NP_378160.1|	-	0.17	12.0	12.8	0.14	12.3	2.3	2.3	2	1	0	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
ADIP	PF11559.3	gi|15922491|ref|NP_378160.1|	-	0.21	11.4	7.5	0.28	11.0	0.9	2.2	2	0	0	2	2	2	0	Afadin-	and	alpha	-actinin-Binding
DUF4201	PF13870.1	gi|15922491|ref|NP_378160.1|	-	0.22	10.9	10.6	1.3	8.3	1.5	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4201)
DUF2730	PF10805.3	gi|15922491|ref|NP_378160.1|	-	0.22	11.2	2.0	0.74	9.5	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2730)
PilO	PF04350.8	gi|15922491|ref|NP_378160.1|	-	0.22	11.3	5.4	0.59	10.0	0.5	2.1	2	0	0	2	2	2	0	Pilus	assembly	protein,	PilO
Prefoldin_2	PF01920.15	gi|15922491|ref|NP_378160.1|	-	0.24	11.1	19.3	0.44	10.3	5.3	2.5	1	1	1	3	3	3	0	Prefoldin	subunit
OmpH	PF03938.9	gi|15922491|ref|NP_378160.1|	-	0.26	11.2	5.5	0.4	10.5	3.8	1.2	1	0	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
CENP-Q	PF13094.1	gi|15922491|ref|NP_378160.1|	-	0.27	11.2	7.4	0.56	10.2	1.2	2.0	2	0	0	2	2	2	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
Vps51	PF08700.6	gi|15922491|ref|NP_378160.1|	-	0.27	11.1	5.6	0.36	10.6	1.3	2.2	2	0	0	2	2	2	0	Vps51/Vps67
Rop-like	PF05082.8	gi|15922491|ref|NP_378160.1|	-	0.3	10.5	2.3	0.35	10.3	0.7	1.8	1	1	1	2	2	2	0	Rop-like
V_ATPase_I	PF01496.14	gi|15922491|ref|NP_378160.1|	-	0.31	8.8	5.8	0.47	8.2	4.0	1.4	1	1	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
Cortex-I_coil	PF09304.5	gi|15922491|ref|NP_378160.1|	-	0.34	10.9	7.4	1.1	9.3	0.6	2.1	2	0	0	2	2	2	0	Cortexillin	I,	coiled	coil
Prefoldin	PF02996.12	gi|15922491|ref|NP_378160.1|	-	0.37	10.4	10.1	0.34	10.5	2.2	2.3	2	0	0	2	2	2	0	Prefoldin	subunit
bZIP_2	PF07716.10	gi|15922491|ref|NP_378160.1|	-	0.37	10.6	10.3	0.11	12.3	2.6	2.3	2	0	0	2	2	2	0	Basic	region	leucine	zipper
Spc24	PF08286.6	gi|15922491|ref|NP_378160.1|	-	0.38	10.4	6.9	0.49	10.0	0.5	2.1	2	0	0	2	2	2	0	Spc24	subunit	of	Ndc80
ATG16	PF08614.6	gi|15922491|ref|NP_378160.1|	-	0.39	10.5	7.8	0.52	10.0	1.4	2.0	2	0	0	2	2	2	0	Autophagy	protein	16	(ATG16)
Toxin_52	PF15605.1	gi|15922491|ref|NP_378160.1|	-	0.41	10.5	4.8	1.1	9.2	0.3	2.1	1	1	1	2	2	2	0	Putative	toxin	52
Seryl_tRNA_N	PF02403.17	gi|15922491|ref|NP_378160.1|	-	0.52	10.3	11.0	0.57	10.2	1.0	2.2	2	0	0	2	2	2	0	Seryl-tRNA	synthetase	N-terminal	domain
TBPIP	PF07106.8	gi|15922491|ref|NP_378160.1|	-	0.56	9.7	13.2	0.098	12.1	1.3	2.7	2	1	0	2	2	2	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
TPR_MLP1_2	PF07926.7	gi|15922491|ref|NP_378160.1|	-	0.57	9.9	10.0	0.25	11.0	1.6	2.1	2	0	0	2	2	2	0	TPR/MLP1/MLP2-like	protein
DMPK_coil	PF08826.5	gi|15922491|ref|NP_378160.1|	-	0.6	10.0	10.3	0.58	10.1	2.7	2.3	2	0	0	2	2	2	0	DMPK	coiled	coil	domain	like
Paralemmin	PF03285.10	gi|15922491|ref|NP_378160.1|	-	0.61	9.5	2.7	0.83	9.0	1.8	1.2	1	0	0	1	1	1	0	Paralemmin
DUF1319	PF07028.6	gi|15922491|ref|NP_378160.1|	-	0.64	10.2	8.4	1.3	9.2	0.8	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1319)
Occludin_ELL	PF07303.8	gi|15922491|ref|NP_378160.1|	-	0.66	10.7	10.1	1.7	9.3	6.9	1.7	1	1	0	1	1	1	0	Occludin	homology	domain
DUF4298	PF14131.1	gi|15922491|ref|NP_378160.1|	-	0.82	9.5	6.4	0.77	9.6	2.9	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4298)
Laminin_II	PF06009.7	gi|15922491|ref|NP_378160.1|	-	0.82	9.4	8.0	2.8	7.6	5.5	1.8	1	1	0	1	1	1	0	Laminin	Domain	II
Hormone_1	PF00103.15	gi|15922491|ref|NP_378160.1|	-	0.99	8.6	5.4	0.3	10.3	1.1	1.8	1	1	1	2	2	2	0	Somatotropin	hormone	family
Swi5	PF07061.6	gi|15922491|ref|NP_378160.1|	-	1	9.2	5.4	0.29	10.9	0.9	1.9	2	0	0	2	2	2	0	Swi5
DUF972	PF06156.8	gi|15922491|ref|NP_378160.1|	-	1.1	9.5	9.7	0.94	9.8	3.2	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF972)
GreA_GreB_N	PF03449.10	gi|15922491|ref|NP_378160.1|	-	1.1	9.3	7.5	0.29	11.2	0.6	2.8	2	1	0	2	2	2	0	Transcription	elongation	factor,	N-terminal
DUF1664	PF07889.7	gi|15922491|ref|NP_378160.1|	-	1.1	9.0	4.2	1.6	8.5	0.4	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
bZIP_1	PF00170.16	gi|15922491|ref|NP_378160.1|	-	1.2	9.1	13.0	0.25	11.2	2.5	2.2	2	0	0	2	2	2	0	bZIP	transcription	factor
GrpE	PF01025.14	gi|15922491|ref|NP_378160.1|	-	1.2	8.6	6.2	1.1	8.7	0.5	2.0	2	0	0	2	2	2	0	GrpE
YlqD	PF11068.3	gi|15922491|ref|NP_378160.1|	-	1.5	8.8	10.4	4.8	7.2	7.2	1.8	1	1	0	1	1	1	0	YlqD	protein
DUF4200	PF13863.1	gi|15922491|ref|NP_378160.1|	-	1.7	8.5	18.4	1.6	8.7	4.6	2.1	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4200)
FlaC_arch	PF05377.6	gi|15922491|ref|NP_378160.1|	-	1.8	8.5	9.6	2.7	7.9	1.9	2.4	2	0	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
Cep57_CLD_2	PF14197.1	gi|15922491|ref|NP_378160.1|	-	1.9	8.5	9.8	0.51	10.3	1.3	2.3	2	1	0	2	2	2	0	Centrosome	localisation	domain	of	PPC89
PspB	PF06667.7	gi|15922491|ref|NP_378160.1|	-	1.9	8.4	4.2	4.9	7.1	0.3	2.2	2	0	0	2	2	2	0	Phage	shock	protein	B
DivIVA	PF05103.8	gi|15922491|ref|NP_378160.1|	-	2	8.4	8.7	0.44	10.5	1.1	2.1	2	0	0	2	2	2	0	DivIVA	protein
Cauli_DNA-bind	PF03310.8	gi|15922491|ref|NP_378160.1|	-	2	8.2	5.1	4.6	7.1	0.5	2.2	2	0	0	2	2	2	0	Caulimovirus	DNA-binding	protein
DUF3086	PF11285.3	gi|15922491|ref|NP_378160.1|	-	2.2	7.0	6.2	0.32	9.7	1.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3086)
Fib_alpha	PF08702.5	gi|15922491|ref|NP_378160.1|	-	2.5	8.2	10.0	3.5	7.7	1.9	2.1	1	1	0	2	2	2	0	Fibrinogen	alpha/beta	chain	family
XhlA	PF10779.4	gi|15922491|ref|NP_378160.1|	-	2.7	7.9	8.8	0.34	10.8	1.4	2.2	2	0	0	2	2	2	0	Haemolysin	XhlA
DUF3847	PF12958.2	gi|15922491|ref|NP_378160.1|	-	2.7	7.7	10.3	1.6	8.5	1.9	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3847)
Snf7	PF03357.16	gi|15922491|ref|NP_378160.1|	-	2.8	7.2	14.0	15	4.9	9.7	1.9	1	1	0	1	1	1	0	Snf7
DUF4446	PF14584.1	gi|15922491|ref|NP_378160.1|	-	3.6	7.3	8.6	2.1	8.1	1.3	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4446)
DUF45	PF01863.12	gi|15922491|ref|NP_378160.1|	-	3.8	7.2	6.9	4.8	6.9	4.8	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF45
DUF3338	PF11819.3	gi|15922491|ref|NP_378160.1|	-	4	6.8	7.6	14	5.0	5.3	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF3338)
Wbp11	PF09429.5	gi|15922491|ref|NP_378160.1|	-	5	7.1	11.5	4.8	7.2	1.0	2.2	2	0	0	2	2	2	0	WW	domain	binding	protein	11
Syntaxin-6_N	PF09177.6	gi|15922491|ref|NP_378160.1|	-	5.2	7.5	7.0	4.9	7.6	1.1	2.2	1	1	1	2	2	2	0	Syntaxin	6,	N-terminal
MerR-DNA-bind	PF09278.6	gi|15922491|ref|NP_378160.1|	-	6.7	7.1	8.5	1.4	9.3	1.8	2.4	2	1	1	3	3	2	0	MerR,	DNA	binding
NuA4	PF09340.5	gi|15922491|ref|NP_378160.1|	-	7.1	6.3	8.0	1.7	8.3	0.8	2.3	2	0	0	2	2	2	0	Histone	acetyltransferase	subunit	NuA4
Fzo_mitofusin	PF04799.8	gi|15922491|ref|NP_378160.1|	-	8.4	5.7	8.9	1.1	8.6	1.0	2.0	1	1	1	2	2	2	0	fzo-like	conserved	region
GP41	PF00517.12	gi|15922491|ref|NP_378160.1|	-	8.4	5.8	8.2	9	5.7	1.8	2.1	1	1	1	2	2	2	0	Retroviral	envelope	protein
Cdc6_C	PF09079.6	gi|15922492|ref|NP_378161.1|	-	2.2e-16	59.3	0.1	4.6e-16	58.3	0.0	1.6	1	0	0	1	1	1	1	CDC6,	C	terminal
AAA_22	PF13401.1	gi|15922492|ref|NP_378161.1|	-	5.7e-12	45.9	0.1	1.2e-10	41.6	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
AAA	PF00004.24	gi|15922492|ref|NP_378161.1|	-	4.8e-06	26.8	0.1	1.4e-05	25.2	0.0	1.8	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
NB-ARC	PF00931.17	gi|15922492|ref|NP_378161.1|	-	0.00059	18.7	0.0	0.00086	18.2	0.0	1.3	1	0	0	1	1	1	1	NB-ARC	domain
DUF2075	PF09848.4	gi|15922492|ref|NP_378161.1|	-	0.003	16.6	0.0	0.0044	16.0	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
KNOX1	PF03790.8	gi|15922492|ref|NP_378161.1|	-	0.0043	16.3	0.0	0.013	14.8	0.0	1.9	1	0	0	1	1	1	1	KNOX1	domain
AAA_16	PF13191.1	gi|15922492|ref|NP_378161.1|	-	0.0044	17.0	0.0	0.0087	16.0	0.0	1.5	1	0	0	1	1	1	1	AAA	ATPase	domain
Sigma54_activat	PF00158.21	gi|15922492|ref|NP_378161.1|	-	0.0046	16.4	0.0	0.011	15.1	0.0	1.7	2	0	0	2	2	2	1	Sigma-54	interaction	domain
DUF87	PF01935.12	gi|15922492|ref|NP_378161.1|	-	0.02	14.6	0.1	0.18	11.5	0.0	2.3	3	0	0	3	3	3	0	Domain	of	unknown	function	DUF87
Torsin	PF06309.6	gi|15922492|ref|NP_378161.1|	-	0.088	12.7	0.0	0.24	11.3	0.0	1.7	1	0	0	1	1	1	0	Torsin
T2SE	PF00437.15	gi|15922492|ref|NP_378161.1|	-	0.12	11.2	0.0	0.22	10.3	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
Iso_dh	PF00180.15	gi|15922493|ref|NP_378162.1|	-	2.2e-106	355.7	0.3	2.6e-106	355.4	0.2	1.0	1	0	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
TAF	PF02969.12	gi|15922493|ref|NP_378162.1|	-	0.059	13.3	2.9	0.73	9.8	0.1	2.7	3	0	0	3	3	3	0	TATA	box	binding	protein	associated	factor	(TAF)
Peptidase_S8	PF00082.17	gi|15922494|ref|NP_378163.1|	-	2.8e-08	33.2	0.3	4.7e-08	32.5	0.2	1.3	1	0	0	1	1	1	1	Subtilase	family
Pro-kuma_activ	PF09286.6	gi|15922494|ref|NP_378163.1|	-	9.7e-08	32.1	0.0	2.2e-07	31.0	0.0	1.6	1	0	0	1	1	1	1	Pro-kumamolisin,	activation	domain
Dynamitin	PF04912.9	gi|15922495|ref|NP_378164.1|	-	0.15	10.8	1.2	0.15	10.8	0.8	1.0	1	0	0	1	1	1	0	Dynamitin
Peptidase_S30	PF01577.11	gi|15922495|ref|NP_378164.1|	-	0.4	10.0	2.1	0.5	9.7	1.4	1.1	1	0	0	1	1	1	0	Potyvirus	P1	protease
Laminin_II	PF06009.7	gi|15922496|ref|NP_378165.1|	-	0.0044	16.7	3.7	0.0044	16.7	2.6	2.5	2	0	0	2	2	2	1	Laminin	Domain	II
Baculo_PEP_C	PF04513.7	gi|15922496|ref|NP_378165.1|	-	0.0097	15.7	4.1	0.0097	15.7	2.8	2.7	3	0	0	3	3	3	2	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Fib_alpha	PF08702.5	gi|15922496|ref|NP_378165.1|	-	0.22	11.6	24.3	0.71	9.9	7.4	2.4	2	0	0	2	2	2	0	Fibrinogen	alpha/beta	chain	family
SapB_1	PF05184.10	gi|15922496|ref|NP_378165.1|	-	1.2	9.0	4.3	11	5.9	0.0	3.5	3	0	0	3	3	3	0	Saposin-like	type	B,	region	1
Prominin	PF05478.6	gi|15922496|ref|NP_378165.1|	-	2	5.8	15.4	3.6	5.0	10.7	1.4	1	1	0	1	1	1	0	Prominin
UPF0047	PF01894.12	gi|15922497|ref|NP_378166.1|	-	0.12	12.2	0.3	0.52	10.1	0.1	1.9	1	1	1	2	2	2	0	Uncharacterised	protein	family	UPF0047
DUF965	PF06135.7	gi|15922497|ref|NP_378166.1|	-	0.13	12.3	1.6	0.38	10.8	0.2	2.3	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF965)
Histone_HNS	PF00816.16	gi|15922497|ref|NP_378166.1|	-	0.36	11.3	1.9	1.8	9.0	0.1	2.4	2	0	0	2	2	2	0	H-NS	histone	family
AnfG_VnfG	PF03139.10	gi|15922497|ref|NP_378166.1|	-	0.56	10.0	6.1	0.36	10.6	0.8	2.8	2	2	1	3	3	3	0	Vanadium/alternative	nitrogenase	delta	subunit
Semialdhyde_dh	PF01118.19	gi|15922498|ref|NP_378167.1|	-	5.2e-32	110.7	0.0	3.9e-31	107.8	0.0	2.1	2	0	0	2	2	2	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Semialdhyde_dhC	PF02774.13	gi|15922498|ref|NP_378167.1|	-	2e-20	73.4	0.0	2.7e-20	73.0	0.0	1.2	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
ILVD_EDD	PF00920.16	gi|15922499|ref|NP_378168.1|	-	4.2e-220	731.5	0.2	4.8e-220	731.4	0.1	1.0	1	0	0	1	1	1	1	Dehydratase	family
DUF4388	PF14332.1	gi|15922500|ref|NP_378169.1|	-	0.013	15.2	0.0	0.43	10.4	0.0	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4388)
DUF2346	PF09803.4	gi|15922500|ref|NP_378169.1|	-	6.4	6.7	7.9	1.6	8.6	0.1	3.0	2	1	1	3	3	3	0	Uncharacterized	conserved	protein	(DUF2346)
Radical_SAM	PF04055.16	gi|15922501|ref|NP_378170.1|	-	3.2e-23	82.7	0.0	5.1e-23	82.0	0.0	1.3	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|15922501|ref|NP_378170.1|	-	4.8e-07	29.8	0.0	3.5e-06	27.0	0.0	2.0	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|15922501|ref|NP_378170.1|	-	0.0078	16.3	0.0	0.035	14.2	0.0	2.0	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Methyltransf_31	PF13847.1	gi|15922502|ref|NP_378171.1|	-	1.1e-15	57.5	0.2	1.9e-15	56.7	0.1	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|15922502|ref|NP_378171.1|	-	9.2e-15	54.7	0.0	1.3e-14	54.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|15922502|ref|NP_378171.1|	-	6.3e-14	52.2	0.0	1.7e-13	50.8	0.0	1.7	2	0	0	2	2	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|15922502|ref|NP_378171.1|	-	4.4e-13	49.8	0.0	1.4e-12	48.1	0.0	1.7	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|15922502|ref|NP_378171.1|	-	8.7e-13	48.5	0.0	1.5e-12	47.7	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|15922502|ref|NP_378171.1|	-	3.1e-10	40.4	0.0	5e-10	39.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
TehB	PF03848.9	gi|15922502|ref|NP_378171.1|	-	4.3e-08	32.5	0.4	8.2e-08	31.6	0.1	1.5	2	0	0	2	2	2	1	Tellurite	resistance	protein	TehB
Ubie_methyltran	PF01209.13	gi|15922502|ref|NP_378171.1|	-	6.9e-08	31.8	0.1	6.3e-07	28.7	0.0	2.0	2	0	0	2	2	2	1	ubiE/COQ5	methyltransferase	family
Methyltransf_26	PF13659.1	gi|15922502|ref|NP_378171.1|	-	3.7e-07	30.1	0.0	6e-07	29.4	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|15922502|ref|NP_378171.1|	-	2.2e-06	27.1	0.0	5.3e-06	25.9	0.0	1.6	2	0	0	2	2	2	1	Methyltransferase	small	domain
PrmA	PF06325.8	gi|15922502|ref|NP_378171.1|	-	1.8e-05	23.9	0.0	3e-05	23.2	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
CMAS	PF02353.15	gi|15922502|ref|NP_378171.1|	-	0.00014	21.0	0.4	0.00031	19.9	0.1	1.6	2	0	0	2	2	2	1	Mycolic	acid	cyclopropane	synthetase
NodS	PF05401.6	gi|15922502|ref|NP_378171.1|	-	0.0013	18.1	0.0	0.002	17.5	0.0	1.2	1	0	0	1	1	1	1	Nodulation	protein	S	(NodS)
Methyltransf_32	PF13679.1	gi|15922502|ref|NP_378171.1|	-	0.0021	17.7	0.0	0.0037	16.9	0.0	1.4	2	0	0	2	2	1	1	Methyltransferase	domain
DREV	PF05219.7	gi|15922502|ref|NP_378171.1|	-	0.0044	15.9	0.1	0.0082	15.0	0.1	1.6	1	1	1	2	2	2	1	DREV	methyltransferase
Methyltransf_PK	PF05891.7	gi|15922502|ref|NP_378171.1|	-	0.007	15.6	0.1	0.01	15.1	0.1	1.2	1	0	0	1	1	1	1	AdoMet	dependent	proline	di-methyltransferase
CheR	PF01739.13	gi|15922502|ref|NP_378171.1|	-	0.0074	15.5	0.1	0.31	10.3	0.0	2.3	1	1	1	2	2	2	1	CheR	methyltransferase,	SAM	binding	domain
MetW	PF07021.7	gi|15922502|ref|NP_378171.1|	-	0.0094	15.3	0.1	0.015	14.6	0.1	1.3	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
N6_N4_Mtase	PF01555.13	gi|15922502|ref|NP_378171.1|	-	0.0097	15.4	0.1	0.31	10.5	0.0	2.3	2	1	0	2	2	2	1	DNA	methylase
MazG-like	PF12643.2	gi|15922502|ref|NP_378171.1|	-	0.016	15.1	0.1	0.043	13.7	0.1	1.8	1	0	0	1	1	1	0	MazG-like	family
Methyltransf_15	PF09445.5	gi|15922502|ref|NP_378171.1|	-	0.023	14.2	0.0	0.041	13.4	0.0	1.5	1	0	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
N2227	PF07942.7	gi|15922502|ref|NP_378171.1|	-	0.024	13.5	0.6	0.97	8.3	0.0	3.0	2	1	1	3	3	3	0	N2227-like	protein
UPF0020	PF01170.13	gi|15922502|ref|NP_378171.1|	-	0.03	13.9	0.0	0.042	13.4	0.0	1.4	1	1	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
RrnaAD	PF00398.15	gi|15922502|ref|NP_378171.1|	-	0.071	12.1	0.0	0.14	11.1	0.0	1.5	2	0	0	2	2	2	0	Ribosomal	RNA	adenine	dimethylase
TPMT	PF05724.6	gi|15922502|ref|NP_378171.1|	-	0.071	12.5	0.0	0.11	11.9	0.0	1.3	1	0	0	1	1	1	0	Thiopurine	S-methyltransferase	(TPMT)
Lactamase_B	PF00753.22	gi|15922504|ref|NP_378173.1|	-	2.9e-16	59.6	0.3	3.8e-16	59.3	0.2	1.2	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|15922504|ref|NP_378173.1|	-	0.00018	21.1	0.2	0.00023	20.7	0.1	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
NARG2_C	PF10505.4	gi|15922505|ref|NP_378174.1|	-	0.033	13.3	1.1	0.28	10.3	0.3	2.2	2	0	0	2	2	2	0	NMDA	receptor-regulated	gene	protein	2	C-terminus
Rep_N	PF08724.5	gi|15922505|ref|NP_378174.1|	-	0.038	13.5	0.3	0.067	12.7	0.2	1.4	1	0	0	1	1	1	0	Rep	protein	catalytic	domain	like
SCHIP-1	PF10148.4	gi|15922505|ref|NP_378174.1|	-	0.065	12.6	0.0	0.095	12.0	0.0	1.1	1	0	0	1	1	1	0	Schwannomin-interacting	protein	1
COXG	PF06240.8	gi|15922505|ref|NP_378174.1|	-	0.07	12.7	0.1	0.14	11.8	0.1	1.5	1	0	0	1	1	1	0	Carbon	monoxide	dehydrogenase	subunit	G	(CoxG)
Lipoprotein_17	PF04200.7	gi|15922505|ref|NP_378174.1|	-	3.4	7.8	11.0	2.1	8.5	4.6	2.9	1	1	1	2	2	2	0	Lipoprotein	associated	domain
OCD_Mu_crystall	PF02423.10	gi|15922506|ref|NP_378175.1|	-	8.9e-45	152.8	0.0	1.1e-44	152.4	0.0	1.1	1	0	0	1	1	1	1	Ornithine	cyclodeaminase/mu-crystallin	family
2-Hacid_dh_C	PF02826.14	gi|15922506|ref|NP_378175.1|	-	0.0029	16.8	0.0	0.0048	16.0	0.0	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Shikimate_DH	PF01488.15	gi|15922506|ref|NP_378175.1|	-	0.0049	16.9	0.0	0.0084	16.2	0.0	1.4	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
Cob_adeno_trans	PF01923.13	gi|15922507|ref|NP_378176.1|	-	3.7e-51	173.1	0.0	4.2e-51	172.9	0.0	1.0	1	0	0	1	1	1	1	Cobalamin	adenosyltransferase
DDE_Tnp_2	PF04693.7	gi|15922509|ref|NP_378178.1|	-	1.2e-178	593.0	3.7	1.4e-178	592.8	2.6	1.0	1	0	0	1	1	1	1	Archaeal	putative	transposase	ISC1217
DDE_Tnp_1	PF01609.16	gi|15922509|ref|NP_378178.1|	-	4.8e-05	22.9	0.1	8.8e-05	22.1	0.0	1.5	1	1	0	1	1	1	1	Transposase	DDE	domain
HTH_20	PF12840.2	gi|15922509|ref|NP_378178.1|	-	0.0068	16.1	0.0	0.013	15.2	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
Phage_rep_org_N	PF09681.5	gi|15922509|ref|NP_378178.1|	-	0.082	12.4	0.6	0.32	10.5	0.0	2.2	3	0	0	3	3	3	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
DDE_5	PF13546.1	gi|15922509|ref|NP_378178.1|	-	0.089	11.6	0.0	0.15	10.8	0.0	1.3	1	0	0	1	1	1	0	DDE	superfamily	endonuclease
EamA	PF00892.15	gi|15922511|ref|NP_378180.1|	-	5.5e-29	100.7	44.5	6.7e-16	58.4	11.8	2.3	2	0	0	2	2	2	2	EamA-like	transporter	family
EmrE	PF13536.1	gi|15922511|ref|NP_378180.1|	-	0.00082	19.5	30.5	0.16	12.2	7.5	3.1	2	2	1	3	3	3	2	Multidrug	resistance	efflux	transporter
TPT	PF03151.11	gi|15922511|ref|NP_378180.1|	-	0.01	15.4	9.0	0.01	15.4	6.3	2.4	2	0	0	2	2	2	0	Triose-phosphate	Transporter	family
NTP_transferase	PF00483.18	gi|15922512|ref|NP_378181.1|	-	2.5e-16	59.7	0.5	9.5e-15	54.5	0.1	2.2	1	1	1	2	2	2	2	Nucleotidyl	transferase
Hexapep	PF00132.19	gi|15922512|ref|NP_378181.1|	-	1.1e-13	49.9	2.2	7.9e-05	21.9	0.0	4.2	2	1	1	4	4	4	3	Bacterial	transferase	hexapeptide	(six	repeats)
NTP_transf_3	PF12804.2	gi|15922512|ref|NP_378181.1|	-	4.2e-09	36.6	0.0	5.4e-09	36.3	0.0	1.3	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep_2	PF14602.1	gi|15922512|ref|NP_378181.1|	-	3.8e-05	23.1	0.1	0.079	12.5	0.0	3.4	3	0	0	3	3	3	2	Hexapeptide	repeat	of	succinyl-transferase
Glycos_transf_2	PF00535.21	gi|15922512|ref|NP_378181.1|	-	0.0017	18.0	0.0	0.0027	17.4	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
GHMP_kinases_N	PF00288.21	gi|15922513|ref|NP_378182.1|	-	3.2e-11	43.1	0.1	7.5e-11	41.9	0.1	1.7	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|15922513|ref|NP_378182.1|	-	1.8e-08	34.4	0.1	6.8e-08	32.5	0.0	1.9	2	0	0	2	2	2	1	GHMP	kinases	C	terminal
MazG-like	PF12643.2	gi|15922513|ref|NP_378182.1|	-	0.031	14.2	0.4	0.076	12.9	0.3	1.7	1	0	0	1	1	1	0	MazG-like	family
DNA_primase_lrg	PF04104.9	gi|15922513|ref|NP_378182.1|	-	0.13	11.5	0.7	0.24	10.6	0.1	1.7	2	0	0	2	2	2	0	Eukaryotic	and	archaeal	DNA	primase,	large	subunit
SIS	PF01380.17	gi|15922514|ref|NP_378183.1|	-	1.7e-46	157.0	2.4	4.3e-26	91.0	0.4	2.5	2	0	0	2	2	2	2	SIS	domain
GATase_6	PF13522.1	gi|15922514|ref|NP_378183.1|	-	1.7e-24	86.2	0.0	3.3e-24	85.3	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_2	PF00310.16	gi|15922514|ref|NP_378183.1|	-	2.9e-22	78.8	0.0	1.8e-16	59.8	0.0	2.3	1	1	1	2	2	2	2	Glutamine	amidotransferases	class-II
GATase_7	PF13537.1	gi|15922514|ref|NP_378183.1|	-	2.1e-21	75.9	0.0	4.5e-21	74.8	0.0	1.6	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
SIS_2	PF13580.1	gi|15922514|ref|NP_378183.1|	-	2.4e-08	33.7	0.7	0.00048	19.8	0.1	3.5	2	1	1	3	3	3	2	SIS	domain
GATase_4	PF13230.1	gi|15922514|ref|NP_378183.1|	-	2.4e-05	23.1	0.0	4.8e-05	22.1	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
bact-PGI_C	PF10432.4	gi|15922514|ref|NP_378183.1|	-	0.0045	16.6	0.2	0.02	14.5	0.1	2.1	1	1	1	2	2	2	1	Bacterial	phospho-glucose	isomerase	C-terminal	region
Tub_2	PF04525.7	gi|15922514|ref|NP_378183.1|	-	0.058	12.7	0.0	0.46	9.8	0.0	2.1	2	0	0	2	2	2	0	Tubby	C	2
HGTP_anticodon	PF03129.15	gi|15922515|ref|NP_378184.1|	-	1.5e-14	53.7	0.4	2.8e-14	52.8	0.3	1.5	1	0	0	1	1	1	1	Anticodon	binding	domain
Beta-Casp	PF10996.3	gi|15922516|ref|NP_378185.1|	-	5.8e-26	90.8	0.0	1.5e-25	89.5	0.0	1.7	1	0	0	1	1	1	1	Beta-Casp	domain
Lactamase_B_2	PF12706.2	gi|15922516|ref|NP_378185.1|	-	2e-13	50.3	0.0	3.6e-13	49.5	0.0	1.4	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|15922516|ref|NP_378185.1|	-	5.2e-13	49.0	0.0	9.4e-13	48.2	0.0	1.5	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
RMMBL	PF07521.7	gi|15922516|ref|NP_378185.1|	-	1.4e-11	44.0	0.0	2.8e-11	43.0	0.0	1.5	1	0	0	1	1	1	1	RNA-metabolising	metallo-beta-lactamase
PDEase_II	PF02112.10	gi|15922516|ref|NP_378185.1|	-	0.00031	19.7	0.0	0.00064	18.7	0.0	1.4	1	0	0	1	1	1	1	cAMP	phosphodiesterases	class-II
Lactamase_B_3	PF13483.1	gi|15922516|ref|NP_378185.1|	-	0.00061	19.5	0.0	0.0012	18.5	0.0	1.4	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
CheB_methylest	PF01339.12	gi|15922516|ref|NP_378185.1|	-	0.0074	15.7	0.1	0.02	14.3	0.0	1.7	2	0	0	2	2	2	1	CheB	methylesterase
PE-PPE	PF08237.6	gi|15922516|ref|NP_378185.1|	-	0.078	12.3	0.0	0.12	11.7	0.0	1.3	1	0	0	1	1	1	0	PE-PPE	domain
NAC	PF01849.13	gi|15922517|ref|NP_378186.1|	-	8.6e-12	44.4	0.5	8.6e-12	44.4	0.3	1.7	2	0	0	2	2	2	1	NAC	domain
UBA	PF00627.26	gi|15922517|ref|NP_378186.1|	-	3.2e-05	23.6	0.1	5.7e-05	22.8	0.0	1.5	1	0	0	1	1	1	1	UBA/TS-N	domain
DUF59	PF01883.14	gi|15922517|ref|NP_378186.1|	-	0.087	12.8	0.0	0.47	10.4	0.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF59
HTH_3	PF01381.17	gi|15922518|ref|NP_378187.1|	-	9e-13	47.8	0.1	1.7e-12	46.9	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.2	gi|15922518|ref|NP_378187.1|	-	6.7e-10	38.8	0.0	1.4e-09	37.8	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_31	PF13560.1	gi|15922518|ref|NP_378187.1|	-	5.2e-08	32.9	0.0	9.1e-08	32.1	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_37	PF13744.1	gi|15922518|ref|NP_378187.1|	-	0.003	17.3	0.0	0.0065	16.2	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_25	PF13413.1	gi|15922518|ref|NP_378187.1|	-	0.085	12.5	0.1	0.15	11.6	0.1	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
Antitoxin-MazE	PF04014.13	gi|15922519|ref|NP_378188.1|	-	4e-13	48.7	1.6	6.7e-13	48.0	1.1	1.4	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
AbrB-like	PF14250.1	gi|15922519|ref|NP_378188.1|	-	0.0077	16.1	0.2	0.01	15.7	0.1	1.2	1	0	0	1	1	1	1	AbrB-like	transcriptional	regulator
DUF1905	PF08922.6	gi|15922519|ref|NP_378188.1|	-	0.045	13.3	0.9	0.14	11.7	0.1	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1905)
DUF3006	PF11213.3	gi|15922519|ref|NP_378188.1|	-	0.091	12.5	3.8	1.4	8.7	2.6	2.2	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3006)
CDC48_N	PF02359.13	gi|15922519|ref|NP_378188.1|	-	0.1	12.5	0.1	0.17	11.8	0.0	1.4	1	0	0	1	1	1	0	Cell	division	protein	48	(CDC48),	N-terminal	domain
PIN	PF01850.16	gi|15922520|ref|NP_378189.1|	-	5.8e-13	49.2	0.2	6.8e-13	49.0	0.1	1.0	1	0	0	1	1	1	1	PIN	domain
DUF4411	PF14367.1	gi|15922520|ref|NP_378189.1|	-	1.7e-05	24.5	0.1	1.9e-05	24.4	0.1	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4411)
Glycos_transf_1	PF00534.15	gi|15922521|ref|NP_378190.1|	-	2.6e-25	88.7	0.4	7.5e-25	87.3	0.1	1.8	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|15922521|ref|NP_378190.1|	-	6.3e-15	55.5	0.0	1.1e-14	54.7	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|15922521|ref|NP_378190.1|	-	9.6e-05	22.5	0.0	0.0003	20.9	0.0	1.9	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Acetyltransf_11	PF13720.1	gi|15922521|ref|NP_378190.1|	-	0.059	13.6	0.2	0.46	10.7	0.1	2.3	2	0	0	2	2	2	0	Udp	N-acetylglucosamine	O-acyltransferase;	Domain	2
Glycos_transf_2	PF00535.21	gi|15922522|ref|NP_378191.1|	-	1.1e-17	64.2	1.0	2e-17	63.3	0.7	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|15922522|ref|NP_378191.1|	-	4.2e-06	26.7	0.0	6.6e-06	26.0	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.4	gi|15922522|ref|NP_378191.1|	-	0.00036	19.7	1.4	0.00076	18.6	0.9	1.5	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
YtkA	PF13115.1	gi|15922523|ref|NP_378192.1|	-	3.8e-06	27.1	0.1	0.0013	19.0	0.0	3.1	2	0	0	2	2	2	1	YtkA-like
MG1	PF11974.3	gi|15922523|ref|NP_378192.1|	-	0.0096	16.4	0.2	0.0096	16.4	0.2	2.6	3	1	0	3	3	3	1	Alpha-2-macroglobulin	MG1	domain
UN_NPL4	PF11543.3	gi|15922523|ref|NP_378192.1|	-	0.061	13.6	0.1	0.62	10.3	0.0	2.8	3	1	1	4	4	4	0	Nuclear	pore	localisation	protein	NPL4
Alpha_GJ	PF03229.8	gi|15922523|ref|NP_378192.1|	-	0.21	11.9	11.6	0.68	10.2	8.1	1.9	1	0	0	1	1	1	0	Alphavirus	glycoprotein	J
Rifin_STEVOR	PF02009.11	gi|15922523|ref|NP_378192.1|	-	0.5	9.9	7.1	0.85	9.2	4.9	1.3	1	0	0	1	1	1	0	Rifin/stevor	family
Filamin	PF00630.14	gi|15922523|ref|NP_378192.1|	-	0.89	10.1	6.0	1	9.9	1.5	3.1	2	2	0	2	2	2	0	Filamin/ABP280	repeat
CarboxypepD_reg	PF13620.1	gi|15922525|ref|NP_378194.1|	-	9.5e-09	35.2	1.9	9.5e-09	35.2	1.3	4.1	2	2	1	3	3	2	1	Carboxypeptidase	regulatory-like	domain
TMF_DNA_bd	PF12329.3	gi|15922525|ref|NP_378194.1|	-	7.7e-08	32.0	7.4	7e-06	25.7	1.8	2.3	1	1	1	2	2	2	2	TATA	element	modulatory	factor	1	DNA	binding
Reo_sigmaC	PF04582.7	gi|15922525|ref|NP_378194.1|	-	1.1e-07	31.3	12.2	1.1e-07	31.3	8.5	1.8	2	0	0	2	2	1	1	Reovirus	sigma	C	capsid	protein
ATG16	PF08614.6	gi|15922525|ref|NP_378194.1|	-	1.3e-07	31.6	0.3	1.9e-07	31.1	0.2	1.2	1	0	0	1	1	1	1	Autophagy	protein	16	(ATG16)
DUF4480	PF13715.1	gi|15922525|ref|NP_378194.1|	-	2.2e-07	30.8	9.1	8.9e-05	22.4	0.2	3.4	2	2	1	3	3	2	2	Domain	of	unknown	function	(DUF4480)
ADIP	PF11559.3	gi|15922525|ref|NP_378194.1|	-	4.7e-07	29.8	3.8	1.4e-06	28.2	2.7	1.7	1	1	0	1	1	1	1	Afadin-	and	alpha	-actinin-Binding
IncA	PF04156.9	gi|15922525|ref|NP_378194.1|	-	6.9e-07	29.0	2.2	6.9e-07	29.0	1.5	2.6	2	1	1	3	3	1	1	IncA	protein
SlyX	PF04102.7	gi|15922525|ref|NP_378194.1|	-	8.4e-07	29.2	0.1	0.0015	18.8	0.0	2.3	2	0	0	2	2	2	1	SlyX
DUF1664	PF07889.7	gi|15922525|ref|NP_378194.1|	-	3.8e-06	26.7	3.0	1.5e-05	24.7	1.4	2.2	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF1664)
AAA_13	PF13166.1	gi|15922525|ref|NP_378194.1|	-	2.8e-05	22.8	0.5	3.9e-05	22.3	0.4	1.1	1	0	0	1	1	1	1	AAA	domain
LXG	PF04740.7	gi|15922525|ref|NP_378194.1|	-	7.6e-05	22.5	1.4	0.00012	21.9	0.9	1.3	1	0	0	1	1	1	1	LXG	domain	of	WXG	superfamily
CENP-F_leu_zip	PF10473.4	gi|15922525|ref|NP_378194.1|	-	9e-05	22.3	3.6	0.00021	21.1	2.5	1.5	1	1	0	1	1	1	1	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Myosin_tail_1	PF01576.14	gi|15922525|ref|NP_378194.1|	-	9.7e-05	20.3	0.0	0.00013	19.8	0.0	1.0	1	0	0	1	1	1	1	Myosin	tail
CENP-Q	PF13094.1	gi|15922525|ref|NP_378194.1|	-	0.00012	22.1	0.1	0.0002	21.3	0.1	1.3	1	0	0	1	1	1	1	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
Spc7	PF08317.6	gi|15922525|ref|NP_378194.1|	-	0.00014	20.6	1.7	0.00021	20.0	1.2	1.2	1	0	0	1	1	1	1	Spc7	kinetochore	protein
Nup54	PF13874.1	gi|15922525|ref|NP_378194.1|	-	0.00022	20.8	0.3	0.00034	20.3	0.2	1.2	1	0	0	1	1	1	1	Nucleoporin	complex	subunit	54
Lzipper-MIP1	PF14389.1	gi|15922525|ref|NP_378194.1|	-	0.00022	21.2	2.9	1.6	8.8	0.1	3.2	1	1	2	3	3	3	0	Leucine-zipper	of	ternary	complex	factor	MIP1
DUF869	PF05911.6	gi|15922525|ref|NP_378194.1|	-	0.00026	19.3	0.1	0.00032	19.0	0.1	1.0	1	0	0	1	1	1	1	Plant	protein	of	unknown	function	(DUF869)
APG6	PF04111.7	gi|15922525|ref|NP_378194.1|	-	0.00032	19.8	0.0	0.00044	19.3	0.0	1.1	1	0	0	1	1	1	1	Autophagy	protein	Apg6
DUF3450	PF11932.3	gi|15922525|ref|NP_378194.1|	-	0.00035	19.9	0.3	0.00085	18.6	0.2	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3450)
TMF_TATA_bd	PF12325.3	gi|15922525|ref|NP_378194.1|	-	0.00036	20.2	5.7	0.0043	16.7	1.2	2.2	1	1	1	2	2	2	2	TATA	element	modulatory	factor	1	TATA	binding
TBPIP	PF07106.8	gi|15922525|ref|NP_378194.1|	-	0.00038	20.0	4.3	0.0054	16.3	1.9	2.1	1	1	1	2	2	2	2	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
NPV_P10	PF05531.7	gi|15922525|ref|NP_378194.1|	-	0.0004	20.5	6.9	0.36	11.1	2.4	2.4	1	1	1	2	2	2	2	Nucleopolyhedrovirus	P10	protein
MscS_porin	PF12795.2	gi|15922525|ref|NP_378194.1|	-	0.00043	19.6	4.6	0.00067	19.0	3.2	1.2	1	0	0	1	1	1	1	Mechanosensitive	ion	channel	porin	domain
Atg14	PF10186.4	gi|15922525|ref|NP_378194.1|	-	0.00044	19.2	0.0	0.00065	18.7	0.0	1.2	1	0	0	1	1	1	1	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
Bacillus_HBL	PF05791.6	gi|15922525|ref|NP_378194.1|	-	0.0005	19.5	2.1	0.00094	18.5	1.5	1.4	1	0	0	1	1	1	1	Bacillus	haemolytic	enterotoxin	(HBL)
BRE1	PF08647.6	gi|15922525|ref|NP_378194.1|	-	0.00051	19.9	0.6	0.00088	19.2	0.4	1.3	1	0	0	1	1	1	1	BRE1	E3	ubiquitin	ligase
Baculo_PEP_C	PF04513.7	gi|15922525|ref|NP_378194.1|	-	0.00061	19.6	20.8	0.00061	19.6	14.4	2.6	2	1	1	3	3	2	1	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Syntaxin	PF00804.20	gi|15922525|ref|NP_378194.1|	-	0.0008	19.5	5.0	0.0014	18.7	3.5	1.3	1	0	0	1	1	1	1	Syntaxin
LPP	PF04728.8	gi|15922525|ref|NP_378194.1|	-	0.00089	19.0	9.5	0.71	9.7	0.8	3.5	1	1	2	3	3	3	1	Lipoprotein	leucine-zipper
Tropomyosin_1	PF12718.2	gi|15922525|ref|NP_378194.1|	-	0.00098	18.9	0.6	0.0031	17.3	0.4	1.7	1	1	0	1	1	1	1	Tropomyosin	like
EMP24_GP25L	PF01105.19	gi|15922525|ref|NP_378194.1|	-	0.001	18.8	3.0	0.44	10.2	0.2	2.7	1	1	1	2	2	2	1	emp24/gp25L/p24	family/GOLD
Tektin	PF03148.9	gi|15922525|ref|NP_378194.1|	-	0.0011	17.5	2.3	0.006	15.1	0.4	2.0	1	1	0	2	2	2	1	Tektin	family
Herpes_U30	PF04523.8	gi|15922525|ref|NP_378194.1|	-	0.0015	16.1	6.3	0.0021	15.6	4.4	1.1	1	0	0	1	1	1	1	Herpes	virus	tegument	protein	U30
EzrA	PF06160.7	gi|15922525|ref|NP_378194.1|	-	0.0017	16.6	0.7	0.0017	16.6	0.5	1.6	2	0	0	2	2	1	1	Septation	ring	formation	regulator,	EzrA
Laminin_II	PF06009.7	gi|15922525|ref|NP_378194.1|	-	0.002	17.9	7.9	0.0098	15.6	4.6	2.1	1	1	0	1	1	1	1	Laminin	Domain	II
Filament	PF00038.16	gi|15922525|ref|NP_378194.1|	-	0.002	17.6	0.4	0.0034	16.9	0.3	1.2	1	0	0	1	1	1	1	Intermediate	filament	protein
DivIC	PF04977.10	gi|15922525|ref|NP_378194.1|	-	0.0026	17.2	0.2	1.6	8.2	0.0	2.7	1	1	2	3	3	3	0	Septum	formation	initiator
Tropomyosin	PF00261.15	gi|15922525|ref|NP_378194.1|	-	0.0034	16.5	0.1	0.0051	15.9	0.1	1.1	1	0	0	1	1	1	1	Tropomyosin
PEGA	PF08308.6	gi|15922525|ref|NP_378194.1|	-	0.0036	17.0	2.2	0.017	14.8	0.0	3.3	3	0	0	3	3	1	1	PEGA	domain
DUF972	PF06156.8	gi|15922525|ref|NP_378194.1|	-	0.0036	17.6	2.9	0.48	10.8	0.2	2.2	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF972)
MCPsignal	PF00015.16	gi|15922525|ref|NP_378194.1|	-	0.0037	16.8	6.3	0.0072	15.8	4.4	1.5	1	0	0	1	1	1	1	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
WEMBL	PF05701.6	gi|15922525|ref|NP_378194.1|	-	0.0039	15.7	1.6	0.006	15.1	1.1	1.1	1	0	0	1	1	1	1	Weak	chloroplast	movement	under	blue	light
Cluap1	PF10234.4	gi|15922525|ref|NP_378194.1|	-	0.0042	16.3	0.5	0.0082	15.3	0.3	1.4	1	0	0	1	1	1	1	Clusterin-associated	protein-1
MAD	PF05557.8	gi|15922525|ref|NP_378194.1|	-	0.0048	15.0	1.6	0.0069	14.5	1.1	1.1	1	0	0	1	1	1	1	Mitotic	checkpoint	protein
FlaC_arch	PF05377.6	gi|15922525|ref|NP_378194.1|	-	0.0049	16.7	9.9	0.079	12.8	2.4	3.5	1	1	1	2	2	2	1	Flagella	accessory	protein	C	(FlaC)
Laminin_I	PF06008.9	gi|15922525|ref|NP_378194.1|	-	0.0063	15.8	6.1	0.054	12.8	2.2	1.6	1	1	0	1	1	1	1	Laminin	Domain	I
IFT57	PF10498.4	gi|15922525|ref|NP_378194.1|	-	0.0069	15.1	3.5	0.0099	14.6	2.4	1.1	1	0	0	1	1	1	1	Intra-flagellar	transport	protein	57
Mod_r	PF07200.8	gi|15922525|ref|NP_378194.1|	-	0.0076	16.1	0.8	0.012	15.5	0.6	1.1	1	0	0	1	1	1	1	Modifier	of	rudimentary	(Mod(r))	protein
P35	PF02331.10	gi|15922525|ref|NP_378194.1|	-	0.008	15.3	1.3	0.017	14.2	0.9	1.5	1	0	0	1	1	1	1	Apoptosis	preventing	protein
COG5	PF10392.4	gi|15922525|ref|NP_378194.1|	-	0.009	15.9	12.1	0.072	13.0	4.7	2.2	1	1	2	3	3	3	2	Golgi	transport	complex	subunit	5
DUF342	PF03961.8	gi|15922525|ref|NP_378194.1|	-	0.0095	14.3	0.3	0.02	13.2	0.2	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF342)
Prefoldin_2	PF01920.15	gi|15922525|ref|NP_378194.1|	-	0.011	15.5	1.8	0.93	9.2	0.0	2.8	1	1	2	3	3	3	0	Prefoldin	subunit
Prominin	PF05478.6	gi|15922525|ref|NP_378194.1|	-	0.011	13.3	6.0	0.017	12.7	4.1	1.2	1	0	0	1	1	1	0	Prominin
BLOC1_2	PF10046.4	gi|15922525|ref|NP_378194.1|	-	0.011	15.8	6.1	0.086	12.9	4.3	2.2	1	1	0	1	1	1	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
XhlA	PF10779.4	gi|15922525|ref|NP_378194.1|	-	0.014	15.3	5.1	0.021	14.7	0.3	3.1	2	1	0	2	2	1	0	Haemolysin	XhlA
DUF3584	PF12128.3	gi|15922525|ref|NP_378194.1|	-	0.016	12.6	0.2	0.021	12.2	0.2	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
CALCOCO1	PF07888.6	gi|15922525|ref|NP_378194.1|	-	0.016	13.5	0.4	0.023	13.0	0.2	1.1	1	0	0	1	1	1	0	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
COG2	PF06148.6	gi|15922525|ref|NP_378194.1|	-	0.018	14.9	4.8	0.19	11.6	1.2	2.2	1	1	1	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
CCDC155	PF14662.1	gi|15922525|ref|NP_378194.1|	-	0.018	14.6	1.5	0.028	14.0	1.0	1.2	1	0	0	1	1	1	0	Coiled-coil	region	of	CCDC155
Nsp1_C	PF05064.8	gi|15922525|ref|NP_378194.1|	-	0.02	14.5	1.3	0.04	13.5	0.9	1.5	1	0	0	1	1	1	0	Nsp1-like	C-terminal	region
Gp5_C	PF06715.7	gi|15922525|ref|NP_378194.1|	-	0.021	14.7	2.4	0.04	13.8	0.1	2.8	2	0	0	2	2	1	0	Gp5	C-terminal	repeat	(3	copies)
Vps52	PF04129.7	gi|15922525|ref|NP_378194.1|	-	0.021	13.3	2.7	0.032	12.7	1.8	1.3	1	0	0	1	1	1	0	Vps52	/	Sac2	family
Seryl_tRNA_N	PF02403.17	gi|15922525|ref|NP_378194.1|	-	0.021	14.8	0.5	0.61	10.1	0.1	2.1	1	1	1	2	2	2	0	Seryl-tRNA	synthetase	N-terminal	domain
GAS	PF13851.1	gi|15922525|ref|NP_378194.1|	-	0.022	13.9	0.3	0.036	13.2	0.2	1.2	1	0	0	1	1	1	0	Growth-arrest	specific	micro-tubule	binding
Filo_VP35	PF02097.10	gi|15922525|ref|NP_378194.1|	-	0.022	13.9	6.0	0.036	13.2	4.2	1.3	1	0	0	1	1	1	0	Filoviridae	VP35
Mnd1	PF03962.10	gi|15922525|ref|NP_378194.1|	-	0.026	14.2	0.0	0.039	13.6	0.0	1.2	1	0	0	1	1	1	0	Mnd1	family
Snapin_Pallidin	PF14712.1	gi|15922525|ref|NP_378194.1|	-	0.031	14.5	3.6	1.1	9.6	2.6	2.3	1	1	0	1	1	1	0	Snapin/Pallidin
Gp58	PF07902.6	gi|15922525|ref|NP_378194.1|	-	0.031	12.4	12.2	0.18	10.0	8.1	2.0	1	1	1	2	2	2	0	gp58-like	protein
CCDC-167	PF15188.1	gi|15922525|ref|NP_378194.1|	-	0.033	14.1	1.3	0.32	10.9	0.1	2.3	1	1	1	2	2	2	0	Coiled-coil	domain-containing	protein	167
Fib_alpha	PF08702.5	gi|15922525|ref|NP_378194.1|	-	0.036	14.1	6.8	0.073	13.1	2.2	1.9	1	1	1	2	2	2	0	Fibrinogen	alpha/beta	chain	family
RasGAP_C	PF03836.10	gi|15922525|ref|NP_378194.1|	-	0.036	13.7	1.4	0.31	10.7	0.0	2.1	1	1	1	2	2	2	0	RasGAP	C-terminus
ALIX_LYPXL_bnd	PF13949.1	gi|15922525|ref|NP_378194.1|	-	0.039	12.9	1.9	0.06	12.3	1.3	1.2	1	0	0	1	1	1	0	ALIX	V-shaped	domain	binding	to	HIV
Transposase_22	PF02994.9	gi|15922525|ref|NP_378194.1|	-	0.04	12.4	0.8	0.06	11.8	0.6	1.1	1	0	0	1	1	1	0	L1	transposable	element
Macoilin	PF09726.4	gi|15922525|ref|NP_378194.1|	-	0.041	12.1	1.1	0.063	11.5	0.8	1.2	1	0	0	1	1	1	0	Transmembrane	protein
BicD	PF09730.4	gi|15922525|ref|NP_378194.1|	-	0.042	12.2	1.0	0.056	11.8	0.7	1.1	1	0	0	1	1	1	0	Microtubule-associated	protein	Bicaudal-D
DUF812	PF05667.6	gi|15922525|ref|NP_378194.1|	-	0.042	12.3	5.0	0.11	11.0	3.5	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF812)
HAUS-augmin3	PF14932.1	gi|15922525|ref|NP_378194.1|	-	0.045	12.9	3.5	0.065	12.4	2.4	1.1	1	0	0	1	1	1	0	HAUS	augmin-like	complex	subunit	3
DUF4140	PF13600.1	gi|15922525|ref|NP_378194.1|	-	0.053	13.9	0.8	2.1	8.8	0.1	3.2	2	1	0	2	2	1	0	N-terminal	domain	of	unknown	function	(DUF4140)
zf-C4H2	PF10146.4	gi|15922525|ref|NP_378194.1|	-	0.064	13.2	0.0	0.12	12.3	0.0	1.4	1	0	0	1	1	1	0	Zinc	finger-containing	protein
TPR_MLP1_2	PF07926.7	gi|15922525|ref|NP_378194.1|	-	0.07	12.8	4.3	0.25	11.0	3.0	1.8	1	1	0	1	1	1	0	TPR/MLP1/MLP2-like	protein
Kinesin-relat_1	PF12711.2	gi|15922525|ref|NP_378194.1|	-	0.07	13.5	0.1	1.5	9.2	0.0	2.2	2	0	0	2	2	2	0	Kinesin	motor
PspA_IM30	PF04012.7	gi|15922525|ref|NP_378194.1|	-	0.071	12.4	0.2	0.33	10.2	0.1	1.7	1	1	1	2	2	2	0	PspA/IM30	family
MotA_ExbB	PF01618.11	gi|15922525|ref|NP_378194.1|	-	0.075	12.6	4.5	0.29	10.7	3.1	2.2	1	1	0	1	1	1	0	MotA/TolQ/ExbB	proton	channel	family
Med4	PF10018.4	gi|15922525|ref|NP_378194.1|	-	0.085	12.2	2.2	0.64	9.3	1.6	1.9	1	1	0	1	1	1	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
DUF4201	PF13870.1	gi|15922525|ref|NP_378194.1|	-	0.092	12.1	0.3	0.14	11.5	0.2	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4201)
DUF4618	PF15397.1	gi|15922525|ref|NP_378194.1|	-	0.093	12.0	3.3	0.78	9.0	2.2	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4618)
MIS13	PF08202.6	gi|15922525|ref|NP_378194.1|	-	0.094	11.7	2.8	0.13	11.2	1.9	1.1	1	0	0	1	1	1	0	Mis12-Mtw1	protein	family
Allexi_40kDa	PF05549.6	gi|15922525|ref|NP_378194.1|	-	0.096	11.9	5.4	0.16	11.2	3.7	1.3	1	0	0	1	1	1	0	Allexivirus	40kDa	protein
Striatin	PF08232.7	gi|15922525|ref|NP_378194.1|	-	0.096	12.9	0.6	1.9	8.7	0.4	2.1	1	1	0	1	1	1	0	Striatin	family
Apolipoprotein	PF01442.13	gi|15922525|ref|NP_378194.1|	-	0.1	12.1	0.1	0.17	11.3	0.0	1.3	1	0	0	1	1	1	0	Apolipoprotein	A1/A4/E	domain
Hormone_1	PF00103.15	gi|15922525|ref|NP_378194.1|	-	0.1	11.9	3.1	0.16	11.2	2.2	1.2	1	0	0	1	1	1	0	Somatotropin	hormone	family
DegQ	PF08181.6	gi|15922525|ref|NP_378194.1|	-	0.11	12.2	2.0	4.5	7.0	0.1	2.3	2	0	0	2	2	2	0	DegQ	(SacQ)	family
WXG100	PF06013.7	gi|15922525|ref|NP_378194.1|	-	0.11	12.5	0.9	30	4.7	0.1	3.1	2	1	0	3	3	2	0	Proteins	of	100	residues	with	WXG
HALZ	PF02183.13	gi|15922525|ref|NP_378194.1|	-	0.11	12.2	0.3	1.5	8.6	0.0	2.4	2	0	0	2	2	2	0	Homeobox	associated	leucine	zipper
DUF2730	PF10805.3	gi|15922525|ref|NP_378194.1|	-	0.12	12.0	3.2	1.4	8.6	2.2	2.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2730)
DUF2205	PF10224.4	gi|15922525|ref|NP_378194.1|	-	0.14	11.7	1.9	0.82	9.2	0.3	2.3	1	1	1	2	2	2	0	Predicted	coiled-coil	protein	(DUF2205)
DivIVA	PF05103.8	gi|15922525|ref|NP_378194.1|	-	0.14	12.1	0.9	3.1	7.8	0.6	2.3	1	1	0	1	1	1	0	DivIVA	protein
AAA_27	PF13514.1	gi|15922525|ref|NP_378194.1|	-	0.15	9.6	0.5	0.21	9.2	0.4	1.1	1	0	0	1	1	1	0	AAA	domain
Uds1	PF15456.1	gi|15922525|ref|NP_378194.1|	-	0.15	12.0	0.8	1.2	9.1	1.2	1.9	2	1	0	2	2	1	0	Up-regulated	During	Septation
Med9	PF07544.8	gi|15922525|ref|NP_378194.1|	-	0.17	11.6	0.2	2.3	7.9	0.0	2.3	1	1	1	2	2	2	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
Vps53_N	PF04100.7	gi|15922525|ref|NP_378194.1|	-	0.17	10.6	2.5	0.26	10.0	1.7	1.2	1	0	0	1	1	1	0	Vps53-like,	N-terminal
DUF904	PF06005.7	gi|15922525|ref|NP_378194.1|	-	0.18	12.1	1.6	2	8.7	1.1	2.1	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF904)
Vps51	PF08700.6	gi|15922525|ref|NP_378194.1|	-	0.24	11.2	9.2	0.69	9.7	3.3	3.0	1	1	2	3	3	3	0	Vps51/Vps67
NTR2	PF15458.1	gi|15922525|ref|NP_378194.1|	-	0.24	10.5	3.6	1.7	7.7	2.7	1.9	1	1	1	2	2	2	0	Nineteen	complex-related	protein	2
bZIP_1	PF00170.16	gi|15922525|ref|NP_378194.1|	-	0.27	11.1	2.5	14	5.7	0.6	2.6	1	1	2	3	3	3	0	bZIP	transcription	factor
Lge1	PF11488.3	gi|15922525|ref|NP_378194.1|	-	0.28	11.3	6.5	5.2	7.3	2.4	2.4	1	1	1	2	2	2	0	Transcriptional	regulatory	protein	LGE1
RmuC	PF02646.11	gi|15922525|ref|NP_378194.1|	-	0.33	9.7	4.4	1.1	8.0	0.8	2.0	1	1	1	2	2	2	0	RmuC	family
Spc24	PF08286.6	gi|15922525|ref|NP_378194.1|	-	0.51	10.0	4.2	6.9	6.3	0.8	2.4	1	1	1	2	2	2	0	Spc24	subunit	of	Ndc80
CASP_C	PF08172.7	gi|15922525|ref|NP_378194.1|	-	0.53	9.2	6.2	0.53	9.2	3.0	1.8	1	1	1	2	2	2	0	CASP	C	terminal
MbeD_MobD	PF04899.7	gi|15922525|ref|NP_378194.1|	-	0.6	10.0	3.7	2.6	8.0	0.5	2.4	1	1	0	2	2	2	0	MbeD/MobD	like
Lectin_N	PF03954.9	gi|15922525|ref|NP_378194.1|	-	0.65	9.3	12.6	3.3	7.0	8.2	2.3	1	1	0	1	1	1	0	Hepatic	lectin,	N-terminal	domain
Vps5	PF09325.5	gi|15922525|ref|NP_378194.1|	-	0.68	9.1	4.0	1.8	7.7	2.7	1.6	1	1	0	1	1	1	0	Vps5	C	terminal	like
AIP3	PF03915.8	gi|15922525|ref|NP_378194.1|	-	0.73	8.6	3.1	1.1	8.0	2.2	1.1	1	0	0	1	1	1	0	Actin	interacting	protein	3
Syntaxin-6_N	PF09177.6	gi|15922525|ref|NP_378194.1|	-	1.3	9.4	3.9	4.3	7.8	2.7	1.9	1	1	0	1	1	1	0	Syntaxin	6,	N-terminal
CCDC144C	PF14915.1	gi|15922525|ref|NP_378194.1|	-	1.7	7.4	12.3	0.86	8.4	3.3	2.1	1	1	1	2	2	2	0	CCDC144C	protein	coiled-coil	region
DASH_Duo1	PF08651.5	gi|15922525|ref|NP_378194.1|	-	2.6	7.6	7.3	10	5.7	0.3	2.7	1	1	1	2	2	2	0	DASH	complex	subunit	Duo1
Syntaxin_2	PF14523.1	gi|15922525|ref|NP_378194.1|	-	3.2	7.8	10.8	36	4.4	7.5	2.3	1	1	0	1	1	1	0	Syntaxin-like	protein
DUF948	PF06103.6	gi|15922525|ref|NP_378194.1|	-	4.7	7.1	21.8	0.28	11.0	0.4	3.7	2	1	2	4	4	3	0	Bacterial	protein	of	unknown	function	(DUF948)
DUF677	PF05055.7	gi|15922525|ref|NP_378194.1|	-	5	5.6	12.3	0.14	10.8	0.6	2.7	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF677)
FlxA	PF14282.1	gi|15922525|ref|NP_378194.1|	-	9.1	6.2	19.2	3.6	7.5	4.4	2.8	1	1	1	2	2	2	0	FlxA-like	protein
Glu_synthase	PF01645.12	gi|15922526|ref|NP_378195.1|	-	4.8e-97	325.1	4.3	6.2e-92	308.3	1.8	2.1	2	0	0	2	2	2	2	Conserved	region	in	glutamate	synthase
Glu_syn_central	PF04898.9	gi|15922526|ref|NP_378195.1|	-	6.8e-11	41.9	0.0	1.7e-05	24.2	0.0	3.3	3	1	0	3	3	3	3	Glutamate	synthase	central	domain
FMN_dh	PF01070.13	gi|15922526|ref|NP_378195.1|	-	1.5e-07	30.6	8.5	9.4e-05	21.4	3.7	2.7	2	0	0	2	2	2	2	FMN-dependent	dehydrogenase
IMPDH	PF00478.20	gi|15922526|ref|NP_378195.1|	-	0.0015	17.4	3.8	0.39	9.5	4.2	2.7	3	0	0	3	3	3	1	IMP	dehydrogenase	/	GMP	reductase	domain
NMO	PF03060.10	gi|15922526|ref|NP_378195.1|	-	0.035	13.2	11.1	0.059	12.5	5.6	2.2	2	1	0	3	3	3	0	Nitronate	monooxygenase
DUF1192	PF06698.6	gi|15922526|ref|NP_378195.1|	-	0.084	12.6	0.3	4.2	7.2	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1192)
DHO_dh	PF01180.16	gi|15922526|ref|NP_378195.1|	-	0.09	11.7	2.3	0.2	10.5	1.6	1.6	1	1	0	1	1	1	0	Dihydroorotate	dehydrogenase
PcrB	PF01884.12	gi|15922526|ref|NP_378195.1|	-	0.31	10.2	4.1	7.6	5.6	0.4	2.5	1	1	1	2	2	2	0	PcrB	family
GXGXG	PF01493.14	gi|15922527|ref|NP_378196.1|	-	5e-26	90.9	15.6	2.1e-24	85.6	10.9	2.6	1	1	0	1	1	1	1	GXGXG	motif
GATase_2	PF00310.16	gi|15922527|ref|NP_378196.1|	-	3.9e-15	55.4	0.0	9.6e-14	50.8	0.0	2.3	2	0	0	2	2	2	1	Glutamine	amidotransferases	class-II
GATase_6	PF13522.1	gi|15922527|ref|NP_378196.1|	-	1.4e-14	54.2	0.0	3e-14	53.1	0.0	1.6	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_7	PF13537.1	gi|15922527|ref|NP_378196.1|	-	1e-05	25.2	0.0	3.3e-05	23.6	0.0	1.9	1	1	0	1	1	1	1	Glutamine	amidotransferase	domain
CbiG_N	PF11760.3	gi|15922528|ref|NP_378197.1|	-	0.00044	19.9	0.0	0.0008	19.0	0.0	1.4	1	0	0	1	1	1	1	Cobalamin	synthesis	G	N-terminal
CbiG_mid	PF11761.3	gi|15922528|ref|NP_378197.1|	-	0.0064	16.6	0.0	0.018	15.2	0.0	1.7	2	0	0	2	2	2	1	Cobalamin	biosynthesis	central	region
Peripla_BP_2	PF01497.13	gi|15922529|ref|NP_378198.1|	-	7.1e-22	77.6	0.0	8.2e-22	77.4	0.0	1.0	1	0	0	1	1	1	1	Periplasmic	binding	protein
DNA_pol_B_exo1	PF03104.14	gi|15922529|ref|NP_378198.1|	-	0.083	11.7	0.0	0.11	11.2	0.0	1.2	1	0	0	1	1	1	0	DNA	polymerase	family	B,	exonuclease	domain
HMGL-like	PF00682.14	gi|15922531|ref|NP_378200.1|	-	2.7e-45	154.8	0.0	4.2e-45	154.2	0.0	1.2	1	0	0	1	1	1	1	HMGL-like
LeuA_dimer	PF08502.5	gi|15922531|ref|NP_378200.1|	-	9.9e-25	86.8	0.3	1.8e-24	86.0	0.2	1.4	1	0	0	1	1	1	1	LeuA	allosteric	(dimerisation)	domain
NTP_transf_2	PF01909.18	gi|15922531|ref|NP_378200.1|	-	0.0048	17.2	1.1	0.015	15.6	0.1	2.4	2	1	0	2	2	2	1	Nucleotidyltransferase	domain
MobB	PF03205.9	gi|15922531|ref|NP_378200.1|	-	0.037	13.7	0.0	0.12	12.0	0.0	1.8	1	1	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
UbiA	PF01040.13	gi|15922532|ref|NP_378201.1|	-	1.6e-30	106.2	23.5	2.1e-30	105.8	16.3	1.2	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
DUF4282	PF14110.1	gi|15922532|ref|NP_378201.1|	-	0.0081	16.3	0.0	0.0081	16.3	0.0	3.6	1	1	3	4	4	4	1	Domain	of	unknown	function	(DUF4282)
AIG2	PF06094.7	gi|15922533|ref|NP_378202.1|	-	1e-23	83.7	5.9	9.5e-17	61.3	1.3	2.2	2	0	0	2	2	2	2	AIG2-like	family
AIG2_2	PF13772.1	gi|15922533|ref|NP_378202.1|	-	2.5e-11	43.5	3.3	3.4e-09	36.6	0.2	2.3	2	0	0	2	2	2	2	AIG2-like	family
LSM	PF01423.17	gi|15922533|ref|NP_378202.1|	-	0.014	14.9	0.2	0.034	13.6	0.2	1.9	1	1	0	1	1	1	0	LSM	domain
SF3b10	PF07189.6	gi|15922533|ref|NP_378202.1|	-	0.071	12.9	0.0	0.13	12.0	0.0	1.4	1	0	0	1	1	1	0	Splicing	factor	3B	subunit	10	(SF3b10)
NfeD	PF01957.13	gi|15922534|ref|NP_378203.1|	-	2.1e-18	66.8	1.8	2.4e-18	66.6	1.2	1.1	1	0	0	1	1	1	1	NfeD-like	C-terminal,	partner-binding
DUF4179	PF13786.1	gi|15922534|ref|NP_378203.1|	-	0.39	10.9	2.7	0.42	10.8	0.7	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4179)
Thermopsin	PF05317.6	gi|15922535|ref|NP_378204.1|	-	1.7e-54	184.5	11.4	1.7e-54	184.5	7.9	2.4	2	1	0	2	2	2	1	Thermopsin
DUF2523	PF10734.4	gi|15922535|ref|NP_378204.1|	-	0.0086	16.2	0.6	0.033	14.4	0.4	2.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2523)
Band_7	PF01145.20	gi|15922536|ref|NP_378205.1|	-	6.4e-38	130.4	1.8	8.6e-38	130.0	1.3	1.2	1	0	0	1	1	1	1	SPFH	domain	/	Band	7	family
Band_7_1	PF13421.1	gi|15922536|ref|NP_378205.1|	-	0.0036	16.8	0.1	0.035	13.6	0.1	2.2	2	0	0	2	2	2	1	SPFH	domain-Band	7	family
Aldolase_2	PF10120.4	gi|15922537|ref|NP_378206.1|	-	1e-60	204.0	0.1	1.1e-60	203.8	0.0	1.0	1	0	0	1	1	1	1	Putative	aldolase
MerR	PF00376.18	gi|15922537|ref|NP_378206.1|	-	0.11	12.0	0.2	1.6	8.3	0.0	2.5	2	0	0	2	2	2	0	MerR	family	regulatory	protein
PadR	PF03551.9	gi|15922538|ref|NP_378207.1|	-	1.1e-16	60.3	0.0	1.7e-16	59.7	0.0	1.3	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_45	PF14947.1	gi|15922538|ref|NP_378207.1|	-	0.00024	20.8	1.1	0.0024	17.6	0.0	2.6	2	1	1	3	3	3	1	Winged	helix-turn-helix
TrmB	PF01978.14	gi|15922538|ref|NP_378207.1|	-	0.00059	19.4	0.1	0.0031	17.1	0.0	2.2	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
DUF1495	PF07381.6	gi|15922538|ref|NP_378207.1|	-	0.0045	16.6	0.4	0.013	15.1	0.1	2.0	2	1	0	2	2	2	1	Winged	helix	DNA-binding	domain	(DUF1495)
Ribosomal_S8	PF00410.14	gi|15922538|ref|NP_378207.1|	-	0.0085	15.9	0.2	0.98	9.2	0.1	2.2	1	1	1	2	2	2	1	Ribosomal	protein	S8
HTH_27	PF13463.1	gi|15922538|ref|NP_378207.1|	-	0.0099	16.1	0.0	0.072	13.4	0.0	2.2	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_5	PF01022.15	gi|15922538|ref|NP_378207.1|	-	0.011	15.4	0.1	1.1	8.9	0.0	3.1	4	0	0	4	4	4	0	Bacterial	regulatory	protein,	arsR	family
AphA_like	PF14557.1	gi|15922538|ref|NP_378207.1|	-	0.016	14.7	0.0	0.023	14.2	0.0	1.3	1	1	0	1	1	1	0	Putative	AphA-like	transcriptional	regulator
B-block_TFIIIC	PF04182.7	gi|15922538|ref|NP_378207.1|	-	0.047	13.5	0.2	5.8	6.8	0.0	2.8	2	1	1	3	3	3	0	B-block	binding	subunit	of	TFIIIC
DUF3116	PF11313.3	gi|15922538|ref|NP_378207.1|	-	0.11	12.1	0.4	1.8	8.2	0.1	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3116)
Pyr_redox_2	PF07992.9	gi|15922539|ref|NP_378208.1|	-	9.5e-18	64.8	0.1	1.3e-17	64.4	0.1	1.2	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|15922539|ref|NP_378208.1|	-	2e-07	31.2	1.3	0.013	15.9	0.4	2.5	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_9	PF13454.1	gi|15922539|ref|NP_378208.1|	-	2.6e-05	24.0	0.1	0.021	14.5	0.0	2.7	3	0	0	3	3	3	2	FAD-NAD(P)-binding
DAO	PF01266.19	gi|15922539|ref|NP_378208.1|	-	0.00022	20.2	0.2	0.055	12.3	0.0	2.9	3	0	0	3	3	3	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|15922539|ref|NP_378208.1|	-	0.0045	16.9	0.0	0.013	15.5	0.0	1.8	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Trp_halogenase	PF04820.9	gi|15922539|ref|NP_378208.1|	-	0.0067	15.0	0.3	0.018	13.7	0.0	1.8	2	0	0	2	2	2	1	Tryptophan	halogenase
TrkA_N	PF02254.13	gi|15922539|ref|NP_378208.1|	-	0.011	15.7	0.3	0.041	13.8	0.1	2.0	2	0	0	2	2	2	0	TrkA-N	domain
Pyr_redox_3	PF13738.1	gi|15922539|ref|NP_378208.1|	-	0.015	15.3	0.0	1.1	9.2	0.0	2.4	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.12	gi|15922539|ref|NP_378208.1|	-	0.017	14.1	0.3	0.052	12.6	0.1	1.9	2	0	0	2	2	2	0	Thi4	family
FAD_binding_3	PF01494.14	gi|15922539|ref|NP_378208.1|	-	0.036	13.1	0.0	0.22	10.5	0.0	1.9	2	0	0	2	2	2	0	FAD	binding	domain
NAD_Gly3P_dh_N	PF01210.18	gi|15922539|ref|NP_378208.1|	-	0.053	13.2	0.0	0.12	12.0	0.0	1.6	2	0	0	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Lycopene_cycl	PF05834.7	gi|15922539|ref|NP_378208.1|	-	0.057	12.3	0.1	0.15	10.9	0.0	1.8	1	1	1	2	2	2	0	Lycopene	cyclase	protein
ApbA	PF02558.11	gi|15922539|ref|NP_378208.1|	-	0.06	12.7	0.0	0.095	12.1	0.0	1.4	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
NAD_binding_7	PF13241.1	gi|15922539|ref|NP_378208.1|	-	0.078	13.2	0.7	0.14	12.4	0.0	1.8	2	1	0	2	2	2	0	Putative	NAD(P)-binding
Saccharop_dh	PF03435.13	gi|15922539|ref|NP_378208.1|	-	0.092	11.7	0.0	0.16	10.9	0.0	1.4	1	0	0	1	1	1	0	Saccharopine	dehydrogenase
GIDA	PF01134.17	gi|15922539|ref|NP_378208.1|	-	0.11	11.3	0.2	10	4.8	0.0	2.3	2	0	0	2	2	2	0	Glucose	inhibited	division	protein	A
GMC_oxred_N	PF00732.14	gi|15922539|ref|NP_378208.1|	-	0.14	11.3	0.0	0.22	10.6	0.0	1.3	1	0	0	1	1	1	0	GMC	oxidoreductase
DUF364	PF04016.7	gi|15922540|ref|NP_378209.1|	-	3.2e-29	101.1	0.0	5.2e-29	100.4	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF364)
DUF4213	PF13938.1	gi|15922540|ref|NP_378209.1|	-	2.3e-16	59.6	0.1	3.5e-16	59.1	0.1	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4213)
DUF836	PF05768.9	gi|15922541|ref|NP_378210.1|	-	0.025	14.8	0.1	0.099	12.9	0.0	2.0	1	0	0	1	1	1	0	Glutaredoxin-like	domain	(DUF836)
Glyco_hydro_76	PF03663.9	gi|15922541|ref|NP_378210.1|	-	0.052	12.9	0.0	0.084	12.2	0.0	1.3	1	0	0	1	1	1	0	Glycosyl	hydrolase	family	76
Thioredoxin_2	PF13098.1	gi|15922541|ref|NP_378210.1|	-	0.099	12.8	0.3	0.28	11.3	0.2	1.8	1	1	0	1	1	1	0	Thioredoxin-like	domain
DUF1599	PF07659.6	gi|15922541|ref|NP_378210.1|	-	0.31	11.1	3.4	0.39	10.8	0.2	2.9	3	0	0	3	3	3	0	Domain	of	Unknown	Function	(DUF1599)
DUF2175	PF09943.4	gi|15922542|ref|NP_378211.1|	-	1.5e-39	134.1	0.9	1.6e-39	133.9	0.6	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2175)
Vps39_2	PF10367.4	gi|15922542|ref|NP_378211.1|	-	0.003	17.7	0.3	0.01	16.0	0.0	1.9	2	1	0	2	2	2	1	Vacuolar	sorting	protein	39	domain	2
DUF2410	PF10307.4	gi|15922542|ref|NP_378211.1|	-	0.0095	15.3	0.2	0.011	15.1	0.2	1.1	1	0	0	1	1	1	1	Hypothetical	protein	(DUF2410)
GatB_Yqey	PF02637.13	gi|15922542|ref|NP_378211.1|	-	0.016	14.9	0.8	0.019	14.6	0.6	1.1	1	0	0	1	1	1	0	GatB	domain
Alpha-2-MRAP_C	PF06401.6	gi|15922542|ref|NP_378211.1|	-	0.016	15.0	0.4	0.02	14.7	0.3	1.1	1	0	0	1	1	1	0	Alpha-2-macroglobulin	RAP,	C-terminal	domain
RepA_N	PF06970.6	gi|15922542|ref|NP_378211.1|	-	0.091	12.5	0.1	0.22	11.3	0.1	1.8	1	1	0	1	1	1	0	Replication	initiator	protein	A	(RepA)	N-terminus
FliG_M	PF14841.1	gi|15922542|ref|NP_378211.1|	-	0.1	12.6	0.1	0.22	11.5	0.1	1.5	1	0	0	1	1	1	0	FliG	middle	domain
Thy1	PF02511.10	gi|15922543|ref|NP_378212.1|	-	2.5e-65	219.3	2.0	3.2e-65	219.0	1.4	1.1	1	0	0	1	1	1	1	Thymidylate	synthase	complementing	protein
DUF2360	PF10152.4	gi|15922543|ref|NP_378212.1|	-	0.062	13.5	0.1	0.12	12.6	0.1	1.5	1	1	0	1	1	1	0	Predicted	coiled-coil	domain-containing	protein	(DUF2360)
Oxidored_q4	PF00507.14	gi|15922544|ref|NP_378213.1|	-	0.00029	20.6	4.1	0.00042	20.0	2.7	1.4	1	1	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase,	chain	3
Complex1_30kDa	PF00329.14	gi|15922545|ref|NP_378214.1|	-	1.1e-34	118.7	0.0	1.6e-34	118.2	0.0	1.2	1	0	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase,	30	Kd	subunit
Complex1_49kDa	PF00346.14	gi|15922546|ref|NP_378215.1|	-	7.8e-64	215.2	0.0	9.8e-64	214.9	0.0	1.1	1	0	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase,	49	Kd	subunit
NiFeSe_Hases	PF00374.14	gi|15922546|ref|NP_378215.1|	-	0.058	12.1	0.0	0.11	11.3	0.0	1.3	1	0	0	1	1	1	0	Nickel-dependent	hydrogenase
NADHdh	PF00146.16	gi|15922547|ref|NP_378216.1|	-	1.1e-52	179.1	22.4	2.5e-50	171.2	15.5	2.0	1	1	0	1	1	1	1	NADH	dehydrogenase
Fer4	PF00037.22	gi|15922548|ref|NP_378217.1|	-	1.3e-14	53.0	12.7	5.1e-09	35.3	2.1	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|15922548|ref|NP_378217.1|	-	1.1e-10	40.9	12.5	1.4e-05	24.7	1.9	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|15922548|ref|NP_378217.1|	-	2.8e-10	40.4	9.0	5e-10	39.6	6.3	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|15922548|ref|NP_378217.1|	-	3.6e-10	39.4	5.2	6.2e-10	38.7	3.6	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|15922548|ref|NP_378217.1|	-	1.7e-09	37.3	8.9	4.4e-09	36.0	6.2	1.7	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|15922548|ref|NP_378217.1|	-	1.5e-08	34.7	8.2	3.1e-08	33.7	5.7	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|15922548|ref|NP_378217.1|	-	1.1e-07	31.3	11.6	0.00035	20.3	1.7	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|15922548|ref|NP_378217.1|	-	1.4e-07	32.1	5.6	0.00032	21.3	5.2	2.4	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_17	PF13534.1	gi|15922548|ref|NP_378217.1|	-	7.2e-07	29.4	0.4	0.035	14.4	0.0	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|15922548|ref|NP_378217.1|	-	6.8e-06	26.4	5.2	0.027	14.8	1.0	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|15922548|ref|NP_378217.1|	-	7.2e-06	25.9	9.8	0.0061	16.7	1.1	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|15922548|ref|NP_378217.1|	-	1.1e-05	25.2	16.4	0.00038	20.4	6.0	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|15922548|ref|NP_378217.1|	-	6.5e-05	23.2	18.3	0.0067	16.9	3.6	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|15922548|ref|NP_378217.1|	-	0.0011	19.4	9.3	0.027	15.0	0.4	2.5	2	1	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.1	gi|15922548|ref|NP_378217.1|	-	0.01	16.2	7.4	0.12	12.7	0.7	2.5	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Oxidored_q3	PF00499.15	gi|15922549|ref|NP_378218.1|	-	6.9e-12	45.3	25.7	9.9e-12	44.8	17.8	1.2	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	6
DUF2561	PF10812.3	gi|15922549|ref|NP_378218.1|	-	0.069	12.7	0.5	0.14	11.7	0.3	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2561)
Oxidored_q2	PF00420.19	gi|15922550|ref|NP_378219.1|	-	2.6e-10	39.7	8.2	3e-10	39.5	5.7	1.0	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
NicO	PF03824.11	gi|15922550|ref|NP_378219.1|	-	0.085	12.1	2.6	0.11	11.7	1.8	1.1	1	0	0	1	1	1	0	High-affinity	nickel-transport	protein
ZYG-11_interact	PF05884.7	gi|15922550|ref|NP_378219.1|	-	0.47	9.4	10.1	0.47	9.5	6.5	1.3	1	1	0	1	1	1	0	Interactor	of	ZYG-11
BphX	PF06139.7	gi|15922550|ref|NP_378219.1|	-	1.2	8.7	5.2	1.8	8.1	3.6	1.3	1	1	0	1	1	1	0	BphX-like
Tic20	PF09685.5	gi|15922550|ref|NP_378219.1|	-	3.7	7.5	9.5	4.4	7.3	6.6	1.1	1	0	0	1	1	1	0	Tic20-like	protein
BCLP	PF12304.3	gi|15922550|ref|NP_378219.1|	-	3.8	6.9	9.8	6	6.2	0.3	2.0	1	1	1	2	2	2	0	Beta-casein	like	protein
DUF485	PF04341.7	gi|15922550|ref|NP_378219.1|	-	5.7	6.7	6.6	0.62	9.8	1.1	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF485
Oxidored_q1	PF00361.15	gi|15922551|ref|NP_378220.1|	-	6.8e-83	278.0	69.0	1.5e-48	165.4	21.5	6.9	6	1	0	6	6	6	3	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
Oxidored_q1	PF00361.15	gi|15922552|ref|NP_378221.1|	-	2.1e-41	141.9	37.9	2.1e-41	141.9	26.3	2.3	2	1	0	2	2	2	1	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
NAD_binding_5	PF07994.7	gi|15922553|ref|NP_378222.1|	-	3.8e-23	82.4	0.0	7.8e-22	78.1	0.0	2.0	1	1	0	1	1	1	1	Myo-inositol-1-phosphate	synthase
Inos-1-P_synth	PF01658.12	gi|15922553|ref|NP_378222.1|	-	6.5e-22	77.4	0.1	1.3e-21	76.5	0.0	1.5	2	0	0	2	2	2	1	Myo-inositol-1-phosphate	synthase
ThiI	PF02568.9	gi|15922554|ref|NP_378223.1|	-	1e-50	171.9	0.2	1.5e-50	171.3	0.1	1.2	1	0	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
THUMP	PF02926.12	gi|15922554|ref|NP_378223.1|	-	6.7e-19	68.1	0.6	6.7e-19	68.1	0.4	1.9	2	0	0	2	2	2	1	THUMP	domain
QueC	PF06508.8	gi|15922554|ref|NP_378223.1|	-	2.3e-08	33.5	0.0	2.1e-06	27.2	0.0	2.6	1	1	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
ATP_bind_3	PF01171.15	gi|15922554|ref|NP_378223.1|	-	0.017	14.5	0.0	0.047	13.1	0.0	1.7	1	1	0	1	1	1	0	PP-loop	family
PAP2	PF01569.16	gi|15922555|ref|NP_378224.1|	-	3.8e-22	78.3	4.7	3.8e-22	78.3	3.2	1.9	2	1	0	2	2	2	1	PAP2	superfamily
PAP2_C	PF14360.1	gi|15922555|ref|NP_378224.1|	-	0.092	13.0	0.6	0.092	13.0	0.4	2.9	3	0	0	3	3	3	0	PAP2	superfamily	C-terminal
Acetyltransf_3	PF13302.1	gi|15922556|ref|NP_378225.1|	-	1.4e-11	44.6	0.1	2e-11	44.2	0.1	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.19	gi|15922556|ref|NP_378225.1|	-	5.2e-08	32.8	0.2	5.2e-08	32.8	0.1	1.6	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	family
Acetyltransf_4	PF13420.1	gi|15922556|ref|NP_378225.1|	-	9.5e-05	22.3	1.1	0.00013	21.9	0.8	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|15922556|ref|NP_378225.1|	-	0.0012	18.9	0.0	0.0019	18.3	0.0	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|15922556|ref|NP_378225.1|	-	0.0038	16.9	0.0	0.0097	15.6	0.0	1.6	1	0	0	1	1	1	1	FR47-like	protein
Gly_acyl_tr_C	PF08444.5	gi|15922556|ref|NP_378225.1|	-	0.0039	17.1	0.2	0.015	15.3	0.0	1.9	2	0	0	2	2	2	1	Aralkyl	acyl-CoA:amino	acid	N-acyltransferase,	C-terminal	region
Acetyltransf_7	PF13508.1	gi|15922556|ref|NP_378225.1|	-	0.0072	16.4	0.9	0.034	14.3	0.6	2.3	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.1	gi|15922556|ref|NP_378225.1|	-	0.014	15.2	0.0	0.02	14.7	0.0	1.3	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|15922556|ref|NP_378225.1|	-	0.055	13.3	0.0	0.083	12.7	0.0	1.5	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
Sulfotransfer_1	PF00685.22	gi|15922556|ref|NP_378225.1|	-	0.074	12.3	0.1	0.12	11.5	0.1	1.3	1	0	0	1	1	1	0	Sulfotransferase	domain
DUF1322	PF07032.6	gi|15922556|ref|NP_378225.1|	-	0.14	12.3	1.7	2.1	8.6	1.2	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1322)
Plasmid_stabil	PF05016.9	gi|15922558|ref|NP_378227.1|	-	2.9e-06	27.5	0.1	3.7e-06	27.2	0.1	1.1	1	0	0	1	1	1	1	Plasmid	stabilisation	system	protein
CRAL_TRIO	PF00650.15	gi|15922558|ref|NP_378227.1|	-	0.063	12.7	0.1	2.1	7.8	0.0	2.6	2	1	1	3	3	3	0	CRAL/TRIO	domain
Plasmid_killer	PF05015.8	gi|15922558|ref|NP_378227.1|	-	0.064	13.4	0.0	0.18	11.9	0.0	1.8	2	0	0	2	2	2	0	Plasmid	maintenance	system	killer	protein
Phage_integrase	PF00589.17	gi|15922559|ref|NP_378228.1|	-	2e-09	37.3	0.2	7.2e-09	35.5	0.1	1.8	2	0	0	2	2	2	1	Phage	integrase	family
HTH_26	PF13443.1	gi|15922559|ref|NP_378228.1|	-	0.0062	16.7	0.1	0.66	10.2	0.0	2.5	2	0	0	2	2	2	1	Cro/C1-type	HTH	DNA-binding	domain
Npa1	PF11707.3	gi|15922559|ref|NP_378228.1|	-	0.019	13.9	0.2	0.025	13.5	0.2	1.2	1	0	0	1	1	1	0	Ribosome	60S	biogenesis	N-terminal
DUF772	PF05598.6	gi|15922560|ref|NP_378229.1|	-	1.5e-05	24.7	0.1	4.1e-05	23.3	0.1	1.8	1	1	0	1	1	1	1	Transposase	domain	(DUF772)
DDE_Tnp_1	PF01609.16	gi|15922560|ref|NP_378229.1|	-	0.024	14.1	0.0	3	7.3	0.0	2.3	1	1	1	2	2	2	0	Transposase	DDE	domain
SSV1_ORF_D-335	PF07935.6	gi|15922561|ref|NP_378230.1|	-	1e-25	89.2	0.1	1.3e-25	88.9	0.1	1.1	1	0	0	1	1	1	1	ORF	D-335-like	protein
DUF2062	PF09835.4	gi|15922562|ref|NP_378231.1|	-	0.022	14.3	0.2	0.029	13.9	0.2	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2062)
HTH_24	PF13412.1	gi|15922563|ref|NP_378232.1|	-	7.4e-07	28.4	0.0	1.2e-06	27.7	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_20	PF12840.2	gi|15922563|ref|NP_378232.1|	-	5e-06	26.2	0.0	2.4e-05	24.0	0.0	1.9	2	0	0	2	2	2	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|15922563|ref|NP_378232.1|	-	8.1e-06	25.4	0.6	1.1e-05	24.9	0.4	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_5	PF01022.15	gi|15922563|ref|NP_378232.1|	-	1.9e-05	24.1	0.1	7e-05	22.4	0.0	1.9	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_36	PF13730.1	gi|15922563|ref|NP_378232.1|	-	0.0015	18.6	1.6	0.0047	17.0	0.1	2.4	2	1	0	2	2	2	1	Helix-turn-helix	domain
LexA_DNA_bind	PF01726.11	gi|15922563|ref|NP_378232.1|	-	0.0029	17.1	0.0	0.0054	16.2	0.0	1.4	1	0	0	1	1	1	1	LexA	DNA	binding	domain
HTH_11	PF08279.7	gi|15922563|ref|NP_378232.1|	-	0.0099	15.5	0.1	0.018	14.7	0.0	1.4	1	0	0	1	1	1	1	HTH	domain
HTH_12	PF08461.5	gi|15922563|ref|NP_378232.1|	-	0.018	14.7	0.2	0.046	13.4	0.0	1.7	2	0	0	2	2	2	0	Ribonuclease	R	winged-helix	domain
HTH_28	PF13518.1	gi|15922563|ref|NP_378232.1|	-	0.023	14.6	0.0	0.049	13.6	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_27	PF13463.1	gi|15922563|ref|NP_378232.1|	-	0.11	12.7	0.0	0.18	12.1	0.0	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
Zip	PF02535.17	gi|15922563|ref|NP_378232.1|	-	0.42	9.5	5.0	0.57	9.1	3.5	1.1	1	0	0	1	1	1	0	ZIP	Zinc	transporter
DUF3043	PF11241.3	gi|15922563|ref|NP_378232.1|	-	0.57	9.7	2.5	0.8	9.2	1.7	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3043)
VIT1	PF01988.14	gi|15922563|ref|NP_378232.1|	-	0.63	9.4	3.5	0.95	8.9	2.4	1.3	1	0	0	1	1	1	0	VIT	family
DUF4179	PF13786.1	gi|15922563|ref|NP_378232.1|	-	5.1	7.3	6.4	3.3	8.0	0.8	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4179)
Cnd1	PF12717.2	gi|15922564|ref|NP_378233.1|	-	0.026	14.3	0.3	0.037	13.8	0.2	1.3	1	0	0	1	1	1	0	non-SMC	mitotic	condensation	complex	subunit	1
Phage_min_cap2	PF06152.6	gi|15922564|ref|NP_378233.1|	-	0.096	11.6	0.5	0.1	11.5	0.4	1.1	1	0	0	1	1	1	0	Phage	minor	capsid	protein	2
PCP	PF02429.10	gi|15922564|ref|NP_378233.1|	-	0.1	12.7	0.0	0.11	12.5	0.0	1.2	1	0	0	1	1	1	0	Peridinin-chlorophyll	A	binding	protein
DHDPS	PF00701.17	gi|15922566|ref|NP_378235.1|	-	3.4e-51	173.5	0.1	4.1e-51	173.2	0.1	1.0	1	0	0	1	1	1	1	Dihydrodipicolinate	synthetase	family
Protein_K	PF12283.3	gi|15922566|ref|NP_378235.1|	-	0.012	15.4	0.1	0.034	14.0	0.1	1.7	1	0	0	1	1	1	0	Bacteriophage	protein	K
HTH_45	PF14947.1	gi|15922566|ref|NP_378235.1|	-	0.12	12.1	1.8	14	5.5	0.2	3.0	2	1	1	3	3	3	0	Winged	helix-turn-helix
YjcQ	PF09639.5	gi|15922566|ref|NP_378235.1|	-	0.45	10.6	5.6	1.9	8.6	0.0	2.9	3	1	0	3	3	3	0	YjcQ	protein
Fe_dep_repr_C	PF02742.10	gi|15922567|ref|NP_378236.1|	-	3e-20	71.6	0.0	4.6e-20	71.0	0.0	1.3	1	0	0	1	1	1	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
HTH_45	PF14947.1	gi|15922567|ref|NP_378236.1|	-	2e-05	24.3	0.0	3.4e-05	23.5	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix
Fe_dep_repress	PF01325.14	gi|15922567|ref|NP_378236.1|	-	0.00013	21.8	0.2	0.00033	20.5	0.1	1.7	2	0	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
TrmB	PF01978.14	gi|15922567|ref|NP_378236.1|	-	0.0012	18.4	0.0	0.0028	17.3	0.0	1.6	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
DUF4423	PF14394.1	gi|15922567|ref|NP_378236.1|	-	0.051	13.1	0.0	0.094	12.2	0.0	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
HemN_C	PF06969.11	gi|15922567|ref|NP_378236.1|	-	0.076	13.0	0.0	0.15	12.1	0.0	1.4	1	0	0	1	1	1	0	HemN	C-terminal	domain
Ribosomal_S19e	PF01090.14	gi|15922567|ref|NP_378236.1|	-	0.13	11.7	0.0	0.17	11.2	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	protein	S19e
TauE	PF01925.14	gi|15922568|ref|NP_378237.1|	-	2.6e-49	167.8	42.9	2.9e-49	167.6	29.8	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
Rick_17kDa_Anti	PF05433.10	gi|15922568|ref|NP_378237.1|	-	0.14	11.8	0.4	0.14	11.8	0.3	3.6	4	0	0	4	4	4	0	Glycine	zipper	2TM	domain
UDG	PF03167.14	gi|15922569|ref|NP_378238.1|	-	6.4e-43	145.8	0.0	8.5e-43	145.4	0.0	1.1	1	0	0	1	1	1	1	Uracil	DNA	glycosylase	superfamily
adh_short_C2	PF13561.1	gi|15922570|ref|NP_378239.1|	-	3.3e-31	108.8	0.0	3.9e-31	108.6	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|15922570|ref|NP_378239.1|	-	6.5e-16	58.6	0.0	1.1e-15	57.9	0.0	1.3	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|15922570|ref|NP_378239.1|	-	1.1e-05	25.2	0.0	1.8e-05	24.5	0.0	1.3	1	0	0	1	1	1	1	KR	domain
NAD_binding_10	PF13460.1	gi|15922570|ref|NP_378239.1|	-	0.00019	21.4	0.0	0.00022	21.2	0.0	1.2	1	0	0	1	1	1	1	NADH(P)-binding
AcetylCoA_hydro	PF02550.10	gi|15922570|ref|NP_378239.1|	-	0.04	13.6	0.0	0.1	12.3	0.0	1.7	1	0	0	1	1	1	0	Acetyl-CoA	hydrolase/transferase	N-terminal	domain
RHH_1	PF01402.16	gi|15922570|ref|NP_378239.1|	-	0.071	13.0	2.5	0.092	12.6	0.3	2.1	2	0	0	2	2	2	0	Ribbon-helix-helix	protein,	copG	family
Polysacc_synt_2	PF02719.10	gi|15922570|ref|NP_378239.1|	-	0.09	11.6	0.0	0.45	9.3	0.0	1.9	2	0	0	2	2	2	0	Polysaccharide	biosynthesis	protein
TrkA_N	PF02254.13	gi|15922570|ref|NP_378239.1|	-	0.11	12.5	0.0	0.21	11.5	0.0	1.5	1	0	0	1	1	1	0	TrkA-N	domain
Plasmid_Txe	PF06769.8	gi|15922570|ref|NP_378239.1|	-	0.15	11.8	0.0	0.34	10.7	0.0	1.6	1	0	0	1	1	1	0	Plasmid	encoded	toxin	Txe
AAA_21	PF13304.1	gi|15922571|ref|NP_378240.1|	-	3.3e-22	79.8	8.0	3.3e-22	79.8	5.5	1.8	2	0	0	2	2	2	1	AAA	domain
AAA_15	PF13175.1	gi|15922571|ref|NP_378240.1|	-	5e-19	68.6	9.5	3.7e-13	49.3	0.4	2.4	1	1	0	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|15922571|ref|NP_378240.1|	-	1.3e-08	34.3	0.8	2.7e-07	30.0	0.5	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|15922571|ref|NP_378240.1|	-	8.9e-08	32.6	0.3	8.9e-08	32.6	0.2	2.0	3	0	0	3	3	3	1	AAA	domain
ABC_tran	PF00005.22	gi|15922571|ref|NP_378240.1|	-	0.0033	17.7	0.7	0.067	13.4	0.5	2.5	1	1	0	1	1	1	1	ABC	transporter
DUF2813	PF11398.3	gi|15922571|ref|NP_378240.1|	-	0.025	13.6	1.4	1.3	7.9	0.1	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2813)
DUF3940	PF13076.1	gi|15922571|ref|NP_378240.1|	-	0.032	13.7	0.1	0.3	10.6	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3940)
AAA_13	PF13166.1	gi|15922571|ref|NP_378240.1|	-	0.066	11.6	6.5	1.5	7.1	1.4	2.6	2	1	0	2	2	2	0	AAA	domain
TraB	PF01963.12	gi|15922571|ref|NP_378240.1|	-	0.1	12.0	0.0	0.27	10.6	0.0	1.7	1	0	0	1	1	1	0	TraB	family
DUF4224	PF13986.1	gi|15922571|ref|NP_378240.1|	-	0.13	11.8	0.0	0.76	9.3	0.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4224)
DUF131	PF01998.12	gi|15922572|ref|NP_378241.1|	-	7.5e-23	79.6	3.9	7.5e-23	79.6	2.7	2.1	1	1	1	2	2	2	1	Protein	of	unknown	function	DUF131
SdpI	PF13630.1	gi|15922572|ref|NP_378241.1|	-	0.0014	18.2	6.2	0.036	13.7	2.0	2.1	2	0	0	2	2	2	1	SdpI/YhfL	protein	family
DUF4064	PF13273.1	gi|15922572|ref|NP_378241.1|	-	0.002	18.1	6.1	0.0032	17.5	4.2	1.3	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF4064)
DUF1634	PF07843.6	gi|15922572|ref|NP_378241.1|	-	0.0052	16.4	1.1	0.0076	15.8	0.8	1.3	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1634)
DcuC	PF03606.10	gi|15922572|ref|NP_378241.1|	-	0.0059	14.8	0.6	0.0077	14.5	0.1	1.4	1	1	0	1	1	1	1	C4-dicarboxylate	anaerobic	carrier
DUF3185	PF11381.3	gi|15922572|ref|NP_378241.1|	-	0.0079	15.9	1.0	2.7	7.8	0.2	2.5	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF3185)
Cyt_c_ox_IV	PF12270.3	gi|15922572|ref|NP_378241.1|	-	0.0093	15.7	0.2	0.016	14.9	0.2	1.4	1	1	0	1	1	1	1	Cytochrome	c	oxidase	subunit	IV
DUF1980	PF09323.5	gi|15922572|ref|NP_378241.1|	-	0.011	15.4	3.7	0.031	14.0	0.0	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF1980)
SUR7	PF06687.7	gi|15922572|ref|NP_378241.1|	-	0.012	15.1	0.8	0.013	15.0	0.5	1.0	1	0	0	1	1	1	0	SUR7/PalI	family
MFS_1	PF07690.11	gi|15922572|ref|NP_378241.1|	-	0.012	14.3	0.9	0.017	13.8	0.6	1.2	1	0	0	1	1	1	0	Major	Facilitator	Superfamily
TctB	PF07331.6	gi|15922572|ref|NP_378241.1|	-	0.015	14.9	0.7	0.025	14.2	0.5	1.4	1	1	0	1	1	1	0	Tripartite	tricarboxylate	transporter	TctB	family
IncA	PF04156.9	gi|15922572|ref|NP_378241.1|	-	0.023	14.3	6.5	0.039	13.5	0.0	2.1	2	0	0	2	2	2	0	IncA	protein
Ni_hydr_CYTB	PF01292.15	gi|15922572|ref|NP_378241.1|	-	0.046	13.1	0.1	0.06	12.7	0.1	1.1	1	0	0	1	1	1	0	Prokaryotic	cytochrome	b561
PRA1	PF03208.14	gi|15922572|ref|NP_378241.1|	-	0.047	13.0	0.2	0.082	12.2	0.2	1.5	1	1	0	1	1	1	0	PRA1	family	protein
DUF3611	PF12263.3	gi|15922572|ref|NP_378241.1|	-	0.047	13.0	0.2	1.9	7.8	0.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3611)
DUF4131	PF13567.1	gi|15922572|ref|NP_378241.1|	-	0.053	12.9	0.2	0.07	12.5	0.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
Neurensin	PF14927.1	gi|15922572|ref|NP_378241.1|	-	0.068	12.5	3.0	0.073	12.4	0.0	1.9	2	0	0	2	2	2	0	Neurensin
Ferric_reduct	PF01794.14	gi|15922572|ref|NP_378241.1|	-	0.071	13.1	0.3	0.18	11.9	0.2	1.6	1	1	0	1	1	1	0	Ferric	reductase	like	transmembrane	component
GRP	PF07172.6	gi|15922572|ref|NP_378241.1|	-	0.1	13.0	1.9	1	9.8	0.0	2.0	2	0	0	2	2	2	0	Glycine	rich	protein	family
Claudin_3	PF06653.6	gi|15922572|ref|NP_378241.1|	-	0.12	12.1	3.8	0.19	11.4	2.6	1.4	1	1	0	1	1	1	0	Tight	junction	protein,	Claudin-like
Sigma_reg_N	PF13800.1	gi|15922572|ref|NP_378241.1|	-	0.12	12.3	6.0	20	5.2	4.4	2.1	2	0	0	2	2	2	0	Sigma	factor	regulator	N-terminal
EphA2_TM	PF14575.1	gi|15922572|ref|NP_378241.1|	-	0.13	12.6	3.6	0.82	10.1	0.0	2.1	2	0	0	2	2	2	0	Ephrin	type-A	receptor	2	transmembrane	domain
Tetraspannin	PF00335.15	gi|15922572|ref|NP_378241.1|	-	0.13	11.5	6.8	0.29	10.3	4.7	1.5	1	1	0	1	1	1	0	Tetraspanin	family
DUF2371	PF10177.4	gi|15922572|ref|NP_378241.1|	-	0.14	11.9	1.8	0.29	11.0	1.2	1.5	1	1	0	1	1	1	0	Uncharacterised	conserved	protein	(DUF2371)
stn_TNFRSF12A	PF12191.3	gi|15922572|ref|NP_378241.1|	-	0.15	12.1	0.4	0.37	10.8	0.0	1.7	2	0	0	2	2	2	0	Tumour	necrosis	factor	receptor	stn_TNFRSF12A_TNFR	domain
ResB	PF05140.9	gi|15922572|ref|NP_378241.1|	-	0.17	10.4	0.6	0.17	10.3	0.0	1.4	2	0	0	2	2	2	0	ResB-like	family
DUF872	PF05915.7	gi|15922572|ref|NP_378241.1|	-	0.17	11.7	4.6	1.4	8.8	0.1	2.2	2	0	0	2	2	2	0	Eukaryotic	protein	of	unknown	function	(DUF872)
DUF1056	PF06341.6	gi|15922572|ref|NP_378241.1|	-	0.18	11.8	0.3	0.18	11.8	0.2	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1056)
Vpu	PF00558.14	gi|15922572|ref|NP_378241.1|	-	0.21	11.1	5.1	13	5.4	0.0	2.2	2	0	0	2	2	2	0	Vpu	protein
DUF1510	PF07423.6	gi|15922572|ref|NP_378241.1|	-	0.23	10.7	1.3	2.8	7.2	0.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1510)
DUF4097	PF13349.1	gi|15922572|ref|NP_378241.1|	-	0.27	10.7	0.0	0.27	10.7	0.0	2.1	2	0	0	2	2	1	0	Domain	of	unknown	function	(DUF4097)
YiaAB	PF05360.9	gi|15922572|ref|NP_378241.1|	-	0.39	10.2	4.3	1.4	8.5	0.5	2.3	2	0	0	2	2	2	0	yiaA/B	two	helix	domain
CRPA	PF05745.6	gi|15922572|ref|NP_378241.1|	-	0.73	9.6	8.9	1.2	8.8	0.1	2.1	2	0	0	2	2	2	0	Chlamydia	15	kDa	cysteine-rich	outer	membrane	protein	(CRPA)
TarH	PF02203.10	gi|15922572|ref|NP_378241.1|	-	0.85	9.4	3.4	3	7.6	0.0	2.0	2	0	0	2	2	2	0	Tar	ligand	binding	domain	homologue
DUF912	PF06024.7	gi|15922572|ref|NP_378241.1|	-	1.1	9.2	5.7	0.16	12.0	0.5	1.9	1	1	1	2	2	2	0	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF912)
OAD_gamma	PF04277.8	gi|15922572|ref|NP_378241.1|	-	1.2	9.5	8.1	2.1	8.7	0.0	2.3	2	0	0	2	2	2	0	Oxaloacetate	decarboxylase,	gamma	chain
DUF2393	PF09624.5	gi|15922572|ref|NP_378241.1|	-	1.2	8.6	5.5	18	4.7	0.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2393)
Na_sulph_symp	PF00939.14	gi|15922572|ref|NP_378241.1|	-	1.6	7.4	8.3	0.27	10.0	2.5	1.8	2	0	0	2	2	2	0	Sodium:sulfate	symporter	transmembrane	region
Baculo_11_kDa	PF06143.6	gi|15922572|ref|NP_378241.1|	-	2.1	7.7	4.6	40	3.6	0.0	2.1	2	0	0	2	2	2	0	Baculovirus	11	kDa	family
Shisa	PF13908.1	gi|15922572|ref|NP_378241.1|	-	2.9	8.0	6.5	1.6	8.8	2.7	1.8	1	1	1	2	2	2	0	Wnt	and	FGF	inhibitory	regulator
DUF751	PF05421.6	gi|15922572|ref|NP_378241.1|	-	3	8.2	12.7	8	6.8	4.2	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF751)
DUF161	PF02588.10	gi|15922572|ref|NP_378241.1|	-	3.6	7.9	11.8	2.2e+02	2.2	8.2	2.2	1	1	0	1	1	1	0	Uncharacterized	BCR,	YitT	family	COG1284
Wzy_C	PF04932.10	gi|15922572|ref|NP_378241.1|	-	5.4	6.7	10.8	4	7.1	3.8	2.0	1	1	1	2	2	2	0	O-Antigen	ligase
ELFV_dehydrog	PF00208.16	gi|15922573|ref|NP_378242.1|	-	1.4e-72	244.2	3.5	2.2e-72	243.6	2.4	1.3	1	0	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
ELFV_dehydrog_N	PF02812.13	gi|15922573|ref|NP_378242.1|	-	7.6e-51	171.1	0.0	1.4e-50	170.2	0.0	1.4	1	0	0	1	1	1	1	Glu/Leu/Phe/Val	dehydrogenase,	dimerisation	domain
2-Hacid_dh_C	PF02826.14	gi|15922573|ref|NP_378242.1|	-	5.9e-05	22.2	0.2	0.0001	21.5	0.2	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
AdoHcyase_NAD	PF00670.16	gi|15922573|ref|NP_378242.1|	-	0.057	13.2	0.6	0.11	12.3	0.4	1.6	1	1	0	1	1	1	0	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
NAD_binding_7	PF13241.1	gi|15922573|ref|NP_378242.1|	-	0.064	13.5	0.1	0.14	12.4	0.0	1.5	1	0	0	1	1	1	0	Putative	NAD(P)-binding
AlaDh_PNT_C	PF01262.16	gi|15922573|ref|NP_378242.1|	-	0.15	11.5	2.3	0.11	12.0	0.3	1.7	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
NUDIX	PF00293.23	gi|15922575|ref|NP_378244.1|	-	5.6e-24	84.3	0.0	8.1e-24	83.7	0.0	1.2	1	0	0	1	1	1	1	NUDIX	domain
NUDIX_4	PF14815.1	gi|15922575|ref|NP_378244.1|	-	6.9e-05	22.2	0.0	0.0001	21.7	0.0	1.2	1	0	0	1	1	1	1	NUDIX	domain
NUDIX_2	PF13869.1	gi|15922575|ref|NP_378244.1|	-	0.092	12.0	0.0	0.12	11.6	0.0	1.1	1	0	0	1	1	1	0	Nucleotide	hydrolase
tRNA-synt_1e	PF01406.14	gi|15922576|ref|NP_378245.1|	-	3.9e-125	416.9	2.2	5.7e-125	416.4	0.2	1.9	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1g	PF09334.6	gi|15922576|ref|NP_378245.1|	-	1.1e-20	73.7	2.7	5.9e-12	44.9	0.5	2.3	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(M)
tRNA-synt_1	PF00133.17	gi|15922576|ref|NP_378245.1|	-	6.4e-06	24.4	0.0	0.0036	15.3	0.0	2.3	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1f	PF01921.13	gi|15922576|ref|NP_378245.1|	-	1.3e-05	24.0	0.3	0.00013	20.8	0.0	2.2	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(K)
DALR_2	PF09190.6	gi|15922576|ref|NP_378245.1|	-	1.6e-05	25.0	0.2	8.2e-05	22.7	0.0	2.3	3	0	0	3	3	3	1	DALR	domain
tRNA-synt_1d	PF00750.14	gi|15922576|ref|NP_378245.1|	-	0.00059	18.7	0.2	0.0028	16.5	0.0	2.1	2	1	0	2	2	2	1	tRNA	synthetases	class	I	(R)
tRNA-synt_1c	PF00749.16	gi|15922576|ref|NP_378245.1|	-	0.00075	18.2	4.3	0.083	11.5	0.8	3.8	3	1	0	3	3	3	2	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
TAN	PF11640.3	gi|15922576|ref|NP_378245.1|	-	0.11	12.1	1.6	11	5.7	0.0	3.0	3	0	0	3	3	3	0	Telomere-length	maintenance	and	DNA	damage	repair
bact-PGI_C	PF10432.4	gi|15922577|ref|NP_378246.1|	-	1.3e-41	141.8	0.3	2.3e-41	141.0	0.1	1.6	2	0	0	2	2	2	1	Bacterial	phospho-glucose	isomerase	C-terminal	region
SIS	PF01380.17	gi|15922577|ref|NP_378246.1|	-	0.0011	18.5	0.0	0.0025	17.3	0.0	1.6	1	0	0	1	1	1	1	SIS	domain
DUF2286	PF10051.4	gi|15922578|ref|NP_378247.1|	-	0.055	13.1	0.1	0.081	12.5	0.0	1.5	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2286)
Pyr_redox_2	PF07992.9	gi|15922579|ref|NP_378248.1|	-	9.3e-26	90.9	6.8	1.8e-12	47.5	0.0	4.0	2	1	1	3	3	3	3	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|15922579|ref|NP_378248.1|	-	1.4e-18	67.0	5.2	3.6e-15	56.1	0.9	3.5	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|15922579|ref|NP_378248.1|	-	1.6e-17	63.5	0.9	3.2e-17	62.5	0.0	2.0	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox_3	PF13738.1	gi|15922579|ref|NP_378248.1|	-	3.2e-13	50.2	0.3	1.8e-08	34.6	0.0	3.2	2	1	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|15922579|ref|NP_378248.1|	-	3.1e-07	29.6	2.1	0.13	11.1	0.3	4.3	5	0	0	5	5	5	2	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|15922579|ref|NP_378248.1|	-	2.8e-05	24.0	0.6	0.036	14.0	0.0	2.6	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
GIDA	PF01134.17	gi|15922579|ref|NP_378248.1|	-	0.0002	20.3	2.2	0.14	11.0	0.1	3.1	3	0	0	3	3	3	2	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.9	gi|15922579|ref|NP_378248.1|	-	0.00038	19.0	6.3	0.3	9.5	0.1	3.9	3	1	1	4	4	4	2	HI0933-like	protein
Lycopene_cycl	PF05834.7	gi|15922579|ref|NP_378248.1|	-	0.00059	18.8	2.9	0.18	10.7	0.0	3.1	2	1	1	3	3	3	2	Lycopene	cyclase	protein
3HCDH_N	PF02737.13	gi|15922579|ref|NP_378248.1|	-	0.0082	15.8	0.3	0.013	15.1	0.2	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
TrkA_N	PF02254.13	gi|15922579|ref|NP_378248.1|	-	0.0091	15.9	0.3	0.047	13.6	0.2	2.1	2	0	0	2	2	2	1	TrkA-N	domain
FAD_binding_2	PF00890.19	gi|15922579|ref|NP_378248.1|	-	0.015	14.1	1.4	0.66	8.7	0.1	2.5	2	0	0	2	2	2	0	FAD	binding	domain
NAD_binding_2	PF03446.10	gi|15922579|ref|NP_378248.1|	-	0.036	13.9	0.1	0.098	12.4	0.0	1.8	2	0	0	2	2	2	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Amino_oxidase	PF01593.19	gi|15922579|ref|NP_378248.1|	-	0.038	13.0	0.2	0.53	9.2	0.0	2.1	2	0	0	2	2	2	0	Flavin	containing	amine	oxidoreductase
ApbA	PF02558.11	gi|15922579|ref|NP_378248.1|	-	0.039	13.4	0.8	0.099	12.0	0.2	1.8	2	0	0	2	2	2	0	Ketopantoate	reductase	PanE/ApbA
K_oxygenase	PF13434.1	gi|15922579|ref|NP_378248.1|	-	0.039	12.8	0.0	0.079	11.8	0.0	1.5	1	0	0	1	1	1	0	L-lysine	6-monooxygenase	(NADPH-requiring)
NAD_Gly3P_dh_N	PF01210.18	gi|15922579|ref|NP_378248.1|	-	0.1	12.2	0.1	0.18	11.5	0.1	1.4	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
UDPG_MGDP_dh_N	PF03721.9	gi|15922579|ref|NP_378248.1|	-	0.14	11.5	3.2	0.73	9.1	1.2	2.3	2	1	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
NAD_binding_7	PF13241.1	gi|15922579|ref|NP_378248.1|	-	0.16	12.2	0.9	1.1	9.5	0.2	2.6	3	1	0	3	3	2	0	Putative	NAD(P)-binding
Trp_halogenase	PF04820.9	gi|15922579|ref|NP_378248.1|	-	0.25	9.9	2.0	4.9	5.6	0.0	2.1	2	0	0	2	2	2	0	Tryptophan	halogenase
NAD_binding_9	PF13454.1	gi|15922579|ref|NP_378248.1|	-	0.32	10.7	5.1	11	5.7	0.0	3.7	4	0	0	4	4	4	0	FAD-NAD(P)-binding
FAD_binding_3	PF01494.14	gi|15922579|ref|NP_378248.1|	-	0.76	8.7	4.8	0.15	11.1	0.1	1.9	2	0	0	2	2	2	0	FAD	binding	domain
NurA	PF09376.5	gi|15922580|ref|NP_378249.1|	-	1.4e-30	106.5	1.5	1.8e-30	106.2	1.0	1.1	1	0	0	1	1	1	1	NurA	domain
AAA_10	PF12846.2	gi|15922581|ref|NP_378250.1|	-	8.3e-22	77.9	0.2	1.2e-13	51.1	0.0	2.1	2	0	0	2	2	2	2	AAA-like	domain
DUF87	PF01935.12	gi|15922581|ref|NP_378250.1|	-	5e-17	62.4	8.8	4.2e-16	59.4	3.6	3.3	3	1	0	3	3	3	1	Domain	of	unknown	function	DUF87
DUF853	PF05872.7	gi|15922581|ref|NP_378250.1|	-	5.6e-09	34.8	0.0	0.0017	16.7	0.0	2.1	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
TrwB_AAD_bind	PF10412.4	gi|15922581|ref|NP_378250.1|	-	1.2e-07	30.7	0.0	5e-07	28.6	0.0	1.9	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA	PF00004.24	gi|15922581|ref|NP_378250.1|	-	6.8e-06	26.3	0.1	0.0042	17.2	0.0	2.4	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
FtsK_SpoIIIE	PF01580.13	gi|15922581|ref|NP_378250.1|	-	1.3e-05	24.8	0.0	4.9e-05	22.8	0.0	1.8	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
AAA_22	PF13401.1	gi|15922581|ref|NP_378250.1|	-	8.6e-05	22.6	0.0	0.12	12.4	0.0	2.7	2	1	0	2	2	2	2	AAA	domain
Zot	PF05707.7	gi|15922581|ref|NP_378250.1|	-	0.0015	17.9	0.1	0.018	14.5	0.0	2.3	2	0	0	2	2	2	1	Zonular	occludens	toxin	(Zot)
ResIII	PF04851.10	gi|15922581|ref|NP_378250.1|	-	0.0025	17.6	0.0	2.7	7.8	0.0	2.3	2	0	0	2	2	2	2	Type	III	restriction	enzyme,	res	subunit
Pox_A32	PF04665.7	gi|15922581|ref|NP_378250.1|	-	0.0063	15.8	0.2	0.015	14.5	0.1	1.6	1	0	0	1	1	1	1	Poxvirus	A32	protein
AAA_32	PF13654.1	gi|15922581|ref|NP_378250.1|	-	0.012	14.3	0.0	0.021	13.5	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
UPF0079	PF02367.12	gi|15922581|ref|NP_378250.1|	-	0.038	13.6	0.0	0.076	12.6	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
DEAD	PF00270.24	gi|15922581|ref|NP_378250.1|	-	0.049	13.1	0.0	7.9	5.9	0.0	2.4	2	0	0	2	2	2	0	DEAD/DEAH	box	helicase
AAA_25	PF13481.1	gi|15922581|ref|NP_378250.1|	-	0.051	12.9	0.1	1.1	8.6	0.1	2.5	2	1	1	3	3	3	0	AAA	domain
Miro	PF08477.8	gi|15922581|ref|NP_378250.1|	-	0.055	13.9	0.0	0.18	12.3	0.0	1.9	2	0	0	2	2	1	0	Miro-like	protein
T2SE	PF00437.15	gi|15922581|ref|NP_378250.1|	-	0.11	11.3	0.1	0.4	9.5	0.0	1.9	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
ABC_tran	PF00005.22	gi|15922581|ref|NP_378250.1|	-	0.14	12.4	0.0	0.36	11.1	0.0	1.7	1	0	0	1	1	1	0	ABC	transporter
RNaseH_C	PF09293.5	gi|15922582|ref|NP_378251.1|	-	0.0022	17.8	0.1	0.0032	17.3	0.1	1.2	1	0	0	1	1	1	1	T4	RNase	H,	C	terminal
4HBT	PF03061.17	gi|15922583|ref|NP_378252.1|	-	2.1e-20	72.6	0.0	4.3e-09	36.3	0.0	2.5	2	0	0	2	2	2	2	Thioesterase	superfamily
4HBT_2	PF13279.1	gi|15922583|ref|NP_378252.1|	-	2.3e-06	28.0	0.3	0.047	14.1	0.0	2.2	1	1	1	2	2	2	2	Thioesterase-like	superfamily
Acyl-ACP_TE	PF01643.12	gi|15922583|ref|NP_378252.1|	-	0.0028	16.6	0.4	0.0045	15.9	0.3	1.3	1	0	0	1	1	1	1	Acyl-ACP	thioesterase
DivIVA	PF05103.8	gi|15922583|ref|NP_378252.1|	-	0.0076	16.3	1.7	0.015	15.3	1.2	1.4	1	0	0	1	1	1	1	DivIVA	protein
PDDEXK_4	PF14281.1	gi|15922583|ref|NP_378252.1|	-	0.0093	15.8	0.1	0.016	15.1	0.1	1.3	1	0	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
NYD-SP28_assoc	PF14775.1	gi|15922583|ref|NP_378252.1|	-	0.047	13.3	0.8	0.098	12.3	0.5	1.5	1	0	0	1	1	1	0	Sperm	tail	C-terminal	domain
ADH_N	PF08240.7	gi|15922584|ref|NP_378253.1|	-	2.9e-28	97.7	0.5	5.8e-28	96.8	0.4	1.5	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|15922584|ref|NP_378253.1|	-	1.4e-25	89.3	0.2	3.5e-25	88.0	0.1	1.7	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|15922584|ref|NP_378253.1|	-	2.1e-07	31.8	0.0	1.6e-06	29.0	0.0	2.2	2	0	0	2	2	2	1	Zinc-binding	dehydrogenase
ELFV_dehydrog	PF00208.16	gi|15922584|ref|NP_378253.1|	-	0.003	17.1	0.3	0.0055	16.3	0.2	1.4	1	0	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
AlaDh_PNT_C	PF01262.16	gi|15922584|ref|NP_378253.1|	-	0.0053	16.3	1.0	0.099	12.2	0.2	2.4	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
DapB_N	PF01113.15	gi|15922584|ref|NP_378253.1|	-	0.02	14.7	2.0	0.98	9.3	1.4	2.5	1	1	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
2-Hacid_dh_C	PF02826.14	gi|15922584|ref|NP_378253.1|	-	0.053	12.6	0.1	0.12	11.5	0.1	1.6	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_10	PF13460.1	gi|15922584|ref|NP_378253.1|	-	0.096	12.6	0.1	0.15	12.0	0.0	1.3	1	0	0	1	1	1	0	NADH(P)-binding
SIS_2	PF13580.1	gi|15922584|ref|NP_378253.1|	-	0.15	11.8	0.9	11	5.7	0.2	2.9	2	1	0	2	2	2	0	SIS	domain
CoA_binding	PF02629.14	gi|15922584|ref|NP_378253.1|	-	0.17	12.3	1.7	0.63	10.5	0.2	2.6	2	0	0	2	2	2	0	CoA	binding	domain
DUF4446	PF14584.1	gi|15922585|ref|NP_378254.1|	-	0.0054	16.5	0.1	0.01	15.6	0.1	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4446)
DUF4407	PF14362.1	gi|15922585|ref|NP_378254.1|	-	0.024	13.5	0.0	0.038	12.9	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
Cluap1	PF10234.4	gi|15922585|ref|NP_378254.1|	-	0.087	12.0	1.6	0.13	11.4	1.1	1.2	1	0	0	1	1	1	0	Clusterin-associated	protein-1
IncA	PF04156.9	gi|15922585|ref|NP_378254.1|	-	2	7.9	6.4	5	6.6	4.4	1.6	1	1	0	1	1	1	0	IncA	protein
MFS_1	PF07690.11	gi|15922586|ref|NP_378255.1|	-	7.4e-16	57.7	22.2	7.4e-16	57.7	15.4	1.8	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
SPC12	PF06645.8	gi|15922586|ref|NP_378255.1|	-	0.096	12.5	0.4	0.096	12.5	0.2	3.3	3	1	1	4	4	4	0	Microsomal	signal	peptidase	12	kDa	subunit	(SPC12)
CitMHS	PF03600.11	gi|15922587|ref|NP_378256.1|	-	3.7e-38	130.9	34.0	4.7e-33	114.2	18.4	2.1	1	1	1	2	2	2	2	Citrate	transporter
DUF423	PF04241.10	gi|15922587|ref|NP_378256.1|	-	2.7	7.9	7.1	11	6.0	0.1	3.4	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF423)
Acyl-CoA_dh_1	PF00441.19	gi|15922588|ref|NP_378257.1|	-	6.2e-44	149.7	5.3	1.2e-43	148.7	3.7	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_2	PF08028.6	gi|15922588|ref|NP_378257.1|	-	2.9e-21	76.1	4.7	7e-21	74.8	2.0	2.2	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|15922588|ref|NP_378257.1|	-	1e-18	66.5	0.1	1.9e-18	65.6	0.0	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_N	PF02771.11	gi|15922588|ref|NP_378257.1|	-	7.1e-16	58.7	0.4	1.9e-15	57.4	0.3	1.8	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Arc_PepC_II	PF06847.6	gi|15922589|ref|NP_378258.1|	-	1.4e-19	70.3	0.1	2.3e-19	69.6	0.1	1.4	1	0	0	1	1	1	1	Archaeal	Peptidase	A24	C-terminus	Type	II
Peptidase_A24	PF01478.13	gi|15922589|ref|NP_378258.1|	-	4.8e-06	26.6	10.6	4.8e-06	26.6	7.3	1.8	2	1	0	2	2	2	1	Type	IV	leader	peptidase	family
Presenilin	PF01080.12	gi|15922589|ref|NP_378258.1|	-	0.28	9.9	9.1	0.5	9.1	6.3	1.3	1	0	0	1	1	1	0	Presenilin
DDE_Tnp_IS240	PF13610.1	gi|15922590|ref|NP_378259.1|	-	7.9e-06	25.8	0.4	1e-05	25.4	0.3	1.2	1	0	0	1	1	1	1	DDE	domain
DDE_Tnp_IS66	PF03050.9	gi|15922590|ref|NP_378259.1|	-	0.002	17.4	0.2	0.003	16.8	0.1	1.2	1	0	0	1	1	1	1	Transposase	IS66	family
rve	PF00665.21	gi|15922590|ref|NP_378259.1|	-	0.071	13.2	0.2	0.11	12.6	0.1	1.4	1	0	0	1	1	1	0	Integrase	core	domain
DUF3788	PF12663.2	gi|15922590|ref|NP_378259.1|	-	0.094	12.4	0.1	0.14	11.8	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3788)
TFIIS_C	PF01096.13	gi|15922591|ref|NP_378260.1|	-	1.5e-23	82.1	12.5	9.9e-22	76.2	1.6	3.1	3	0	0	3	3	3	2	Transcription	factor	S-II	(TFIIS)
RNA_POL_M_15KD	PF02150.11	gi|15922591|ref|NP_378260.1|	-	6.5e-11	41.7	2.8	6.5e-11	41.7	1.9	2.9	3	0	0	3	3	3	1	RNA	polymerases	M/15	Kd	subunit
zf-ribbon_3	PF13248.1	gi|15922591|ref|NP_378260.1|	-	5.8e-08	31.6	14.2	0.051	12.8	0.1	4.3	4	0	0	4	4	4	3	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.2	gi|15922591|ref|NP_378260.1|	-	2.5e-07	30.4	11.3	5.9e-05	22.7	0.7	2.9	2	1	1	3	3	3	2	Transposase	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|15922591|ref|NP_378260.1|	-	4.1e-07	29.2	5.4	0.0019	17.4	0.6	2.9	2	1	0	2	2	2	2	TFIIB	zinc-binding
OrfB_Zn_ribbon	PF07282.6	gi|15922591|ref|NP_378260.1|	-	4.8e-07	29.3	6.6	0.00041	19.9	0.4	2.5	2	1	0	2	2	2	2	Putative	transposase	DNA-binding	domain
DUF2387	PF09526.5	gi|15922591|ref|NP_378260.1|	-	6.8e-07	29.1	5.1	0.00089	19.1	0.5	2.2	2	0	0	2	2	2	2	Probable	metal-binding	protein	(DUF2387)
zf-ISL3	PF14690.1	gi|15922591|ref|NP_378260.1|	-	8.2e-07	28.9	8.6	0.19	11.7	0.3	4.2	3	1	1	4	4	4	2	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
DZR	PF12773.2	gi|15922591|ref|NP_378260.1|	-	7.1e-06	25.7	9.3	0.00058	19.6	0.9	2.5	2	1	0	2	2	2	2	Double	zinc	ribbon
zinc_ribbon_2	PF13240.1	gi|15922591|ref|NP_378260.1|	-	1.3e-05	24.5	16.6	0.18	11.3	0.1	4.3	4	0	0	4	4	4	2	zinc-ribbon	domain
Zn-ribbon_8	PF09723.5	gi|15922591|ref|NP_378260.1|	-	1.4e-05	24.9	12.1	0.66	9.9	0.1	4.2	4	0	0	4	4	4	1	Zinc	ribbon	domain
IBR	PF01485.16	gi|15922591|ref|NP_378260.1|	-	0.00014	21.6	7.5	0.006	16.4	1.7	3.0	3	0	0	3	3	3	1	IBR	domain
zinc_ribbon_4	PF13717.1	gi|15922591|ref|NP_378260.1|	-	0.00016	21.2	11.5	0.18	11.4	0.3	4.2	4	0	0	4	4	4	1	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|15922591|ref|NP_378260.1|	-	0.00016	21.1	11.6	0.14	11.7	0.2	4.3	3	1	0	3	3	3	1	zinc-ribbon	domain
zf-TFIIB	PF13453.1	gi|15922591|ref|NP_378260.1|	-	0.00047	19.2	1.5	0.00047	19.2	1.0	2.8	2	1	0	2	2	2	1	Transcription	factor	zinc-finger
PhnA_Zn_Ribbon	PF08274.7	gi|15922591|ref|NP_378260.1|	-	0.0028	17.3	8.1	0.062	13.0	1.1	3.5	2	2	0	2	2	2	1	PhnA	Zinc-Ribbon
zf-NADH-PPase	PF09297.6	gi|15922591|ref|NP_378260.1|	-	0.0032	16.9	10.4	0.0072	15.8	0.9	3.8	3	1	1	4	4	4	1	NADH	pyrophosphatase	zinc	ribbon	domain
Zn_ribbon_recom	PF13408.1	gi|15922591|ref|NP_378260.1|	-	0.0034	17.5	2.2	0.0034	17.5	1.5	2.5	2	1	0	2	2	2	1	Recombinase	zinc	beta	ribbon	domain
PolC_DP2	PF03833.8	gi|15922591|ref|NP_378260.1|	-	0.006	14.3	4.6	0.31	8.6	0.1	2.0	1	1	1	2	2	2	2	DNA	polymerase	II	large	subunit	DP2
DNA_ligase_ZBD	PF03119.11	gi|15922591|ref|NP_378260.1|	-	0.0067	16.0	6.2	1.3	8.7	0.0	3.4	3	0	0	3	3	3	1	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Terminase_GpA	PF05876.7	gi|15922591|ref|NP_378260.1|	-	0.011	14.0	4.0	0.039	12.2	0.3	2.1	2	0	0	2	2	2	0	Phage	terminase	large	subunit	(GpA)
Lar_restr_allev	PF14354.1	gi|15922591|ref|NP_378260.1|	-	0.012	15.9	11.8	0.77	10.1	2.1	2.9	1	1	1	2	2	2	0	Restriction	alleviation	protein	Lar
Nudix_N_2	PF14803.1	gi|15922591|ref|NP_378260.1|	-	0.013	15.2	11.7	0.54	9.9	3.0	4.0	3	1	0	3	3	3	0	Nudix	N-terminal
zf-H2C2_2	PF13465.1	gi|15922591|ref|NP_378260.1|	-	0.013	15.7	18.4	0.3	11.4	1.3	4.2	4	0	0	4	4	4	0	Zinc-finger	double	domain
DUF2296	PF10058.4	gi|15922591|ref|NP_378260.1|	-	0.016	14.9	10.8	0.14	11.9	1.4	3.4	2	2	0	2	2	2	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
YhfH	PF14149.1	gi|15922591|ref|NP_378260.1|	-	0.018	14.7	11.9	3.7	7.4	0.0	4.2	4	0	0	4	4	4	0	YhfH-like	protein
zf-GRF	PF06839.7	gi|15922591|ref|NP_378260.1|	-	0.021	14.7	10.8	0.92	9.4	0.5	2.8	2	1	0	2	2	2	0	GRF	zinc	finger
C1_1	PF00130.17	gi|15922591|ref|NP_378260.1|	-	0.028	14.1	7.2	0.081	12.6	1.1	2.9	3	0	0	3	3	3	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
FdhE	PF04216.7	gi|15922591|ref|NP_378260.1|	-	0.029	14.1	4.0	0.31	10.7	0.1	2.1	2	0	0	2	2	2	0	Protein	involved	in	formate	dehydrogenase	formation
zf-tcix	PF14952.1	gi|15922591|ref|NP_378260.1|	-	0.038	13.3	15.4	2.2	7.6	0.2	4.2	4	0	0	4	4	4	0	Putative	treble-clef,	zinc-finger,	Zn-binding
zf-DNA_Pol	PF08996.5	gi|15922591|ref|NP_378260.1|	-	0.04	13.2	2.1	0.39	10.0	0.1	2.2	2	0	0	2	2	2	0	DNA	Polymerase	alpha	zinc	finger
zf-Mss51	PF13824.1	gi|15922591|ref|NP_378260.1|	-	0.041	13.7	9.7	1.3	8.9	2.7	2.7	2	2	0	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
HypA	PF01155.14	gi|15922591|ref|NP_378260.1|	-	0.056	13.1	7.6	0.11	12.2	0.5	2.8	1	1	2	3	3	3	0	Hydrogenase	expression/synthesis	hypA	family
zf-C2HC5	PF06221.8	gi|15922591|ref|NP_378260.1|	-	0.06	13.1	5.3	1.3	8.7	0.6	3.0	3	0	0	3	3	3	0	Putative	zinc	finger	motif,	C2HC5-type
zf-MYND	PF01753.13	gi|15922591|ref|NP_378260.1|	-	0.062	13.1	3.9	3.3	7.6	0.1	2.5	2	1	0	2	2	2	0	MYND	finger
Elf1	PF05129.8	gi|15922591|ref|NP_378260.1|	-	0.063	12.9	7.1	1.6	8.4	0.5	2.8	1	1	0	2	2	2	0	Transcription	elongation	factor	Elf1	like
zf-C4_Topoisom	PF01396.14	gi|15922591|ref|NP_378260.1|	-	0.078	12.4	19.9	0.2	11.1	0.3	4.0	3	1	1	4	4	4	0	Topoisomerase	DNA	binding	C4	zinc	finger
zf-HIT	PF04438.11	gi|15922591|ref|NP_378260.1|	-	0.087	12.4	16.6	0.63	9.7	0.7	4.1	4	0	0	4	4	4	0	HIT	zinc	finger
DUF1610	PF07754.6	gi|15922591|ref|NP_378260.1|	-	0.15	12.2	1.0	0.15	12.2	0.7	4.3	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF1610)
Ogr_Delta	PF04606.7	gi|15922591|ref|NP_378260.1|	-	0.16	11.6	9.4	4.7	6.9	0.0	4.0	4	0	0	4	4	4	0	Ogr/Delta-like	zinc	finger
Ribosomal_S27e	PF01667.12	gi|15922591|ref|NP_378260.1|	-	0.17	11.4	10.2	4.7	6.8	1.0	3.6	2	2	0	2	2	2	0	Ribosomal	protein	S27
Ribosomal_L32p	PF01783.18	gi|15922591|ref|NP_378260.1|	-	0.18	11.9	6.6	50	4.1	1.0	4.1	2	1	2	4	4	4	0	Ribosomal	L32p	protein	family
tRNA-synt_1f	PF01921.13	gi|15922591|ref|NP_378260.1|	-	0.2	10.2	1.8	0.26	9.9	0.4	1.7	1	1	1	2	2	2	0	tRNA	synthetases	class	I	(K)
DUF2082	PF09855.4	gi|15922591|ref|NP_378260.1|	-	0.23	11.3	12.6	4.1	7.3	0.2	4.1	4	0	0	4	4	4	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
Cys_rich_CPCC	PF14206.1	gi|15922591|ref|NP_378260.1|	-	0.25	10.9	7.6	0.096	12.2	0.8	2.7	3	1	0	3	3	2	0	Cysteine-rich	CPCC
Desulfoferrod_N	PF06397.7	gi|15922591|ref|NP_378260.1|	-	0.25	10.7	11.0	1.2	8.6	0.1	3.7	4	0	0	4	4	4	0	Desulfoferrodoxin,	N-terminal	domain
DUF329	PF03884.9	gi|15922591|ref|NP_378260.1|	-	0.26	10.8	10.5	15	5.2	0.3	4.0	3	1	1	4	4	4	0	Domain	of	unknown	function	(DUF329)
RRN7	PF11781.3	gi|15922591|ref|NP_378260.1|	-	0.27	10.7	7.8	3.1	7.3	0.0	3.6	3	1	0	3	3	3	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
DUF164	PF02591.10	gi|15922591|ref|NP_378260.1|	-	0.37	10.6	6.6	21	5.0	0.0	3.8	4	0	0	4	4	4	0	Putative	zinc	ribbon	domain
zf-C2H2_4	PF13894.1	gi|15922591|ref|NP_378260.1|	-	0.37	11.2	9.1	11	6.5	0.0	4.0	4	0	0	4	4	4	0	C2H2-type	zinc	finger
DUF3797	PF12677.2	gi|15922591|ref|NP_378260.1|	-	0.41	10.3	14.9	1.3	8.7	0.1	4.1	3	1	1	4	4	4	0	Domain	of	unknown	function	(DUF3797)
Opy2	PF09463.5	gi|15922591|ref|NP_378260.1|	-	0.44	10.6	8.6	5	7.3	0.0	3.8	4	0	0	4	4	4	0	Opy2	protein
zf-CHY	PF05495.7	gi|15922591|ref|NP_378260.1|	-	0.52	10.5	7.6	3.8	7.7	1.1	2.6	1	1	1	2	2	2	0	CHY	zinc	finger
UPF0547	PF10571.4	gi|15922591|ref|NP_378260.1|	-	0.62	9.8	21.2	1.9	8.2	0.2	4.5	5	0	0	5	5	4	0	Uncharacterised	protein	family	UPF0547
Ribosomal_L37ae	PF01780.14	gi|15922591|ref|NP_378260.1|	-	0.71	9.7	7.7	0.35	10.7	0.2	2.7	2	1	0	2	2	2	0	Ribosomal	L37ae	protein	family
Tnp_zf-ribbon_2	PF13842.1	gi|15922591|ref|NP_378260.1|	-	0.76	10.2	13.6	4.4	7.7	3.5	3.4	3	1	0	3	3	3	0	DDE_Tnp_1-like	zinc-ribbon
C1_4	PF07975.7	gi|15922591|ref|NP_378260.1|	-	0.79	9.7	9.8	12	5.9	1.1	3.2	2	2	1	3	3	3	0	TFIIH	C1-like	domain
RNHCP	PF12647.2	gi|15922591|ref|NP_378260.1|	-	0.81	9.5	9.3	0.14	12.0	0.7	2.9	2	2	0	3	3	3	0	RNHCP	domain
Zn_Tnp_IS91	PF14319.1	gi|15922591|ref|NP_378260.1|	-	0.86	9.1	10.6	5.8	6.4	0.1	3.6	2	2	2	4	4	4	0	Transposase	zinc-binding	domain
GFA	PF04828.9	gi|15922591|ref|NP_378260.1|	-	0.98	9.4	11.2	3.4	7.6	0.6	3.7	1	1	3	4	4	4	0	Glutathione-dependent	formaldehyde-activating	enzyme
NOA36	PF06524.7	gi|15922591|ref|NP_378260.1|	-	1	8.5	5.1	0.24	10.6	0.7	1.9	1	1	0	2	2	2	0	NOA36	protein
zinc-ribbons_6	PF07191.7	gi|15922591|ref|NP_378260.1|	-	1	9.1	6.5	5.4	6.8	1.2	3.2	3	1	1	4	4	4	0	zinc-ribbons
DUF35_N	PF12172.3	gi|15922591|ref|NP_378260.1|	-	1.1	9.1	10.2	35	4.4	0.0	4.1	4	0	0	4	4	4	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Auto_anti-p27	PF06677.7	gi|15922591|ref|NP_378260.1|	-	1.3	8.8	18.7	1.7	8.5	5.5	3.7	3	1	0	3	3	3	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
Rubredoxin	PF00301.15	gi|15922591|ref|NP_378260.1|	-	1.5	8.7	16.8	7.6	6.4	0.7	4.1	3	1	1	4	4	4	0	Rubredoxin
zf-RING_5	PF14634.1	gi|15922591|ref|NP_378260.1|	-	1.7	8.4	9.7	20	4.9	0.0	3.2	3	1	0	3	3	3	0	zinc-RING	finger	domain
DUF2752	PF10825.3	gi|15922591|ref|NP_378260.1|	-	1.9	8.5	0.0	1.9	8.5	0.0	3.1	4	0	0	4	4	3	0	Protein	of	unknown	function	(DUF2752)
A2L_zn_ribbon	PF08792.5	gi|15922591|ref|NP_378260.1|	-	2.9	7.4	16.0	16	5.1	2.7	4.1	3	1	0	3	3	3	0	A2L	zinc	ribbon	domain
zf-C3HC4_4	PF15227.1	gi|15922591|ref|NP_378260.1|	-	3	7.8	7.2	2.2	8.2	0.8	2.9	3	0	0	3	3	3	0	zinc	finger	of	C3HC4-type,	RING
RecR	PF02132.10	gi|15922591|ref|NP_378260.1|	-	4.6	6.7	7.5	9.4	5.7	0.0	3.6	4	0	0	4	4	4	0	RecR	protein
zf-UBR	PF02207.15	gi|15922591|ref|NP_378260.1|	-	4.6	7.0	8.7	2.7	7.7	0.3	2.9	2	1	1	3	3	3	0	Putative	zinc	finger	in	N-recognin	(UBR	box)
Prok-RING_1	PF14446.1	gi|15922591|ref|NP_378260.1|	-	5.7	6.7	11.8	32	4.3	1.8	3.7	3	1	0	3	3	3	0	Prokaryotic	RING	finger	family	1
zf-Sec23_Sec24	PF04810.10	gi|15922591|ref|NP_378260.1|	-	7.1	6.2	7.5	1.8	8.2	0.5	3.0	3	1	0	3	3	3	0	Sec23/Sec24	zinc	finger
zf-RING_4	PF14570.1	gi|15922591|ref|NP_378260.1|	-	7.6	6.2	10.2	13	5.4	1.9	3.2	3	1	0	3	3	3	0	RING/Ubox	like	zinc-binding	domain
RNA_pol_L_2	PF13656.1	gi|15922592|ref|NP_378261.1|	-	4.7e-22	77.2	0.0	5.5e-22	76.9	0.0	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
RNA_pol_L	PF01193.19	gi|15922592|ref|NP_378261.1|	-	1e-12	46.9	0.0	1.3e-12	46.6	0.0	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
DUF3753	PF12575.3	gi|15922592|ref|NP_378261.1|	-	0.079	12.7	0.3	0.18	11.5	0.1	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3753)
ECR1_N	PF14382.1	gi|15922593|ref|NP_378262.1|	-	6.3e-13	47.7	0.1	1.2e-12	46.8	0.1	1.5	1	0	0	1	1	1	1	Exosome	complex	exonuclease	RRP4	N-terminal	region
DUF2318	PF10080.4	gi|15922593|ref|NP_378262.1|	-	0.00014	21.6	0.1	0.00022	20.9	0.1	1.3	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2318)
TF_Zn_Ribbon	PF08271.7	gi|15922593|ref|NP_378262.1|	-	0.0014	17.9	1.2	0.0031	16.7	0.8	1.6	1	0	0	1	1	1	1	TFIIB	zinc-binding
A2L_zn_ribbon	PF08792.5	gi|15922593|ref|NP_378262.1|	-	0.0014	18.0	1.7	0.003	16.9	1.2	1.5	1	0	0	1	1	1	1	A2L	zinc	ribbon	domain
DZR	PF12773.2	gi|15922593|ref|NP_378262.1|	-	0.0014	18.3	0.4	0.0022	17.7	0.3	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-NADH-PPase	PF09297.6	gi|15922593|ref|NP_378262.1|	-	0.0015	17.9	0.8	0.0027	17.1	0.5	1.4	1	0	0	1	1	1	1	NADH	pyrophosphatase	zinc	ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|15922593|ref|NP_378262.1|	-	0.0039	16.8	1.7	0.0071	15.9	1.1	1.4	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
S1	PF00575.18	gi|15922593|ref|NP_378262.1|	-	0.0047	16.9	0.1	0.015	15.4	0.1	1.9	1	1	0	1	1	1	1	S1	RNA	binding	domain
zf-ribbon_3	PF13248.1	gi|15922593|ref|NP_378262.1|	-	0.011	14.9	3.8	0.098	11.8	3.1	2.0	1	1	1	2	2	2	0	zinc-ribbon	domain
HypA	PF01155.14	gi|15922593|ref|NP_378262.1|	-	0.021	14.4	1.3	0.035	13.7	0.9	1.5	1	1	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
tRNA-synt_1e	PF01406.14	gi|15922593|ref|NP_378262.1|	-	0.025	13.7	0.1	0.038	13.0	0.1	1.2	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(C)	catalytic	domain
NOB1_Zn_bind	PF08772.6	gi|15922593|ref|NP_378262.1|	-	0.025	14.3	0.5	0.074	12.8	0.4	1.8	2	0	0	2	2	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
Prok-RING_1	PF14446.1	gi|15922593|ref|NP_378262.1|	-	0.042	13.5	1.5	0.065	12.9	1.0	1.2	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
DNA_RNApol_7kD	PF03604.8	gi|15922593|ref|NP_378262.1|	-	0.071	12.5	4.7	0.17	11.3	3.3	1.6	1	0	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Lyase_8_C	PF02884.12	gi|15922593|ref|NP_378262.1|	-	0.078	13.0	0.0	17	5.5	0.0	2.7	2	1	1	3	3	3	0	Polysaccharide	lyase	family	8,	C-terminal	beta-sandwich	domain
Auto_anti-p27	PF06677.7	gi|15922593|ref|NP_378262.1|	-	0.12	12.1	6.2	0.062	13.0	2.1	2.0	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zinc_ribbon_4	PF13717.1	gi|15922593|ref|NP_378262.1|	-	0.28	10.9	4.2	0.99	9.1	0.2	2.5	1	1	1	2	2	2	0	zinc-ribbon	domain
zf-ISL3	PF14690.1	gi|15922593|ref|NP_378262.1|	-	0.28	11.2	4.2	5.7	7.0	0.4	2.5	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zinc_ribbon_5	PF13719.1	gi|15922593|ref|NP_378262.1|	-	0.3	10.6	4.2	0.78	9.3	0.2	2.4	1	1	1	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|15922593|ref|NP_378262.1|	-	0.39	10.2	5.9	4.5	6.8	1.3	2.2	1	1	0	2	2	2	0	zinc-ribbon	domain
Zn_ribbon_recom	PF13408.1	gi|15922593|ref|NP_378262.1|	-	0.68	10.2	4.9	6	7.2	0.3	2.4	1	1	1	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
Diphthamide_syn	PF01866.12	gi|15922594|ref|NP_378263.1|	-	1.1e-96	323.7	0.0	1.3e-96	323.4	0.0	1.0	1	0	0	1	1	1	1	Putative	diphthamide	synthesis	protein
Leader_Erm	PF08253.6	gi|15922594|ref|NP_378263.1|	-	0.054	12.9	1.1	0.11	11.9	0.7	1.5	1	0	0	1	1	1	0	Erm	Leader	peptide
Ribosomal_L16	PF00252.13	gi|15922595|ref|NP_378264.1|	-	3.1e-31	107.8	0.3	3.6e-31	107.6	0.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L16p/L10e
UPF0104	PF03706.8	gi|15922597|ref|NP_378266.1|	-	6.3e-17	61.7	18.1	9.3e-17	61.2	12.5	1.3	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0104)
ThiF	PF00899.16	gi|15922598|ref|NP_378267.1|	-	1.3e-45	154.5	0.4	1e-44	151.6	0.1	2.0	2	0	0	2	2	2	1	ThiF	family
MoeZ_MoeB	PF05237.8	gi|15922598|ref|NP_378267.1|	-	3.9e-13	48.8	0.1	9.3e-13	47.5	0.0	1.7	1	0	0	1	1	1	1	MoeZ/MoeB	domain
NAD_binding_7	PF13241.1	gi|15922598|ref|NP_378267.1|	-	0.027	14.7	0.1	0.053	13.7	0.1	1.5	1	0	0	1	1	1	0	Putative	NAD(P)-binding
ELFV_dehydrog	PF00208.16	gi|15922598|ref|NP_378267.1|	-	0.035	13.6	0.4	0.06	12.9	0.3	1.4	1	1	0	1	1	1	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
TrkA_N	PF02254.13	gi|15922598|ref|NP_378267.1|	-	0.042	13.8	0.8	0.11	12.4	0.1	2.0	1	1	1	2	2	2	0	TrkA-N	domain
EndIII_4Fe-2S	PF10576.4	gi|15922598|ref|NP_378267.1|	-	3.3	8.0	5.0	17	5.7	0.1	3.2	3	0	0	3	3	3	0	Iron-sulfur	binding	domain	of	endonuclease	III
Transketolase_N	PF00456.16	gi|15922599|ref|NP_378268.1|	-	7.4e-43	146.6	0.0	1.6e-42	145.4	0.0	1.5	1	1	0	1	1	1	1	Transketolase,	thiamine	diphosphate	binding	domain
DXP_synthase_N	PF13292.1	gi|15922599|ref|NP_378268.1|	-	5.1e-11	42.0	0.0	3.4e-07	29.4	0.0	2.3	1	1	1	2	2	2	2	1-deoxy-D-xylulose-5-phosphate	synthase
E1_dh	PF00676.15	gi|15922599|ref|NP_378268.1|	-	8.7e-08	31.2	0.1	1.7e-07	30.3	0.0	1.4	2	0	0	2	2	2	1	Dehydrogenase	E1	component
TPP_enzyme_C	PF02775.16	gi|15922599|ref|NP_378268.1|	-	3.9e-06	26.5	0.6	8.8e-05	22.1	0.4	2.2	1	1	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
XFP_N	PF09364.5	gi|15922599|ref|NP_378268.1|	-	0.00022	19.9	0.1	0.0003	19.4	0.1	1.2	1	0	0	1	1	1	1	XFP	N-terminal	domain
DUF2421	PF10334.4	gi|15922599|ref|NP_378268.1|	-	0.044	13.3	0.0	0.064	12.8	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2421)
Transket_pyr	PF02779.19	gi|15922600|ref|NP_378269.1|	-	6.9e-39	133.1	0.0	9.2e-39	132.7	0.0	1.2	1	0	0	1	1	1	1	Transketolase,	pyrimidine	binding	domain
Transketolase_C	PF02780.15	gi|15922600|ref|NP_378269.1|	-	1.2e-26	93.0	0.1	2.4e-26	92.0	0.1	1.5	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
CM_2	PF01817.16	gi|15922601|ref|NP_378270.1|	-	3e-19	68.8	0.4	6.1e-19	67.8	0.3	1.5	1	0	0	1	1	1	1	Chorismate	mutase	type	II
PDH	PF02153.12	gi|15922601|ref|NP_378270.1|	-	3e-18	65.6	0.0	6.4e-18	64.5	0.0	1.5	1	0	0	1	1	1	1	Prephenate	dehydrogenase
F420_oxidored	PF03807.12	gi|15922601|ref|NP_378270.1|	-	8e-11	42.2	0.0	2.5e-10	40.6	0.0	1.8	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
Shikimate_DH	PF01488.15	gi|15922601|ref|NP_378270.1|	-	3.5e-08	33.6	0.0	1.3e-07	31.8	0.0	1.9	2	0	0	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|15922601|ref|NP_378270.1|	-	0.00024	20.2	0.0	0.00047	19.3	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
TrkA_N	PF02254.13	gi|15922601|ref|NP_378270.1|	-	0.00074	19.5	0.0	0.0025	17.7	0.0	1.9	2	0	0	2	2	2	1	TrkA-N	domain
3HCDH_N	PF02737.13	gi|15922601|ref|NP_378270.1|	-	0.0012	18.5	0.1	0.0038	16.9	0.1	2.0	1	1	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_2	PF03446.10	gi|15922601|ref|NP_378270.1|	-	0.002	17.9	0.0	0.0041	16.9	0.0	1.6	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Saccharop_dh	PF03435.13	gi|15922601|ref|NP_378270.1|	-	0.0085	15.1	0.0	0.012	14.5	0.0	1.3	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
IlvN	PF07991.7	gi|15922601|ref|NP_378270.1|	-	0.014	14.7	0.0	0.027	13.8	0.0	1.4	1	0	0	1	1	1	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
NAD_binding_10	PF13460.1	gi|15922601|ref|NP_378270.1|	-	0.096	12.6	0.0	0.18	11.7	0.0	1.5	1	1	0	1	1	1	0	NADH(P)-binding
ApbA	PF02558.11	gi|15922601|ref|NP_378270.1|	-	0.12	11.7	0.0	0.22	10.9	0.0	1.4	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
NAD_Gly3P_dh_N	PF01210.18	gi|15922601|ref|NP_378270.1|	-	0.12	12.0	0.2	0.52	10.0	0.0	2.1	2	1	0	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
FlaC_arch	PF05377.6	gi|15922601|ref|NP_378270.1|	-	2.2	8.2	8.3	0.49	10.3	0.3	3.4	3	1	0	3	3	2	0	Flagella	accessory	protein	C	(FlaC)
GnsAB	PF08178.6	gi|15922601|ref|NP_378270.1|	-	9.9	5.9	9.7	21	4.8	0.3	3.7	3	2	0	3	3	3	0	GnsA/GnsB	family
DAHP_synth_1	PF00793.15	gi|15922602|ref|NP_378271.1|	-	9e-75	250.8	0.0	1.2e-74	250.4	0.0	1.0	1	0	0	1	1	1	1	DAHP	synthetase	I	family
NeuB	PF03102.9	gi|15922602|ref|NP_378271.1|	-	1.3e-11	44.1	0.1	1.1e-06	28.0	0.0	2.5	2	1	1	3	3	3	2	NeuB	family
DHQ_synthase	PF01761.15	gi|15922603|ref|NP_378272.1|	-	1.3e-94	315.9	0.4	1.6e-94	315.6	0.3	1.1	1	0	0	1	1	1	1	3-dehydroquinate	synthase
Fe-ADH_2	PF13685.1	gi|15922603|ref|NP_378272.1|	-	3.8e-09	36.2	0.0	5.8e-09	35.6	0.0	1.4	1	1	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH	PF00465.14	gi|15922603|ref|NP_378272.1|	-	1.1e-08	34.1	0.1	4.9e-06	25.4	0.0	2.2	2	0	0	2	2	2	2	Iron-containing	alcohol	dehydrogenase
Shikimate_dh_N	PF08501.6	gi|15922604|ref|NP_378273.1|	-	1.2e-26	92.5	0.6	1.8e-24	85.5	0.1	2.6	3	0	0	3	3	3	1	Shikimate	dehydrogenase	substrate	binding	domain
Shikimate_DH	PF01488.15	gi|15922604|ref|NP_378273.1|	-	5.8e-12	45.8	0.1	1e-11	45.1	0.1	1.5	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
NAD_binding_7	PF13241.1	gi|15922604|ref|NP_378273.1|	-	0.014	15.6	0.1	0.028	14.6	0.1	1.5	1	1	0	1	1	1	0	Putative	NAD(P)-binding
XdhC_C	PF13478.1	gi|15922604|ref|NP_378273.1|	-	0.015	15.5	0.0	0.022	15.0	0.0	1.3	1	0	0	1	1	1	0	XdhC	Rossmann	domain
Saccharop_dh	PF03435.13	gi|15922604|ref|NP_378273.1|	-	0.088	11.7	0.0	0.12	11.3	0.0	1.2	1	0	0	1	1	1	0	Saccharopine	dehydrogenase
OCD_Mu_crystall	PF02423.10	gi|15922604|ref|NP_378273.1|	-	0.13	11.0	0.0	0.21	10.3	0.0	1.3	1	0	0	1	1	1	0	Ornithine	cyclodeaminase/mu-crystallin	family
Chorismate_synt	PF01264.16	gi|15922605|ref|NP_378274.1|	-	9.7e-132	438.6	0.0	1.1e-131	438.4	0.0	1.0	1	0	0	1	1	1	1	Chorismate	synthase
GHMP_kinases_N	PF00288.21	gi|15922607|ref|NP_378276.1|	-	2.9e-08	33.6	0.5	6.7e-08	32.4	0.2	1.8	2	0	0	2	2	2	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|15922607|ref|NP_378276.1|	-	0.00097	19.2	0.1	0.0023	18.0	0.0	1.6	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
PP-binding	PF00550.20	gi|15922607|ref|NP_378276.1|	-	0.02	15.1	0.0	0.047	13.9	0.0	1.6	1	0	0	1	1	1	0	Phosphopantetheine	attachment	site
EPSP_synthase	PF00275.15	gi|15922608|ref|NP_378277.1|	-	2.5e-65	220.5	0.0	3e-65	220.3	0.0	1.0	1	0	0	1	1	1	1	EPSP	synthase	(3-phosphoshikimate	1-carboxyvinyltransferase)
GYD	PF08734.6	gi|15922608|ref|NP_378277.1|	-	0.044	13.4	0.3	1.5	8.6	0.1	3.1	3	1	0	3	3	3	0	GYD	domain
DHquinase_I	PF01487.10	gi|15922609|ref|NP_378278.1|	-	5.2e-10	39.3	1.0	1.6e-08	34.4	0.7	2.2	1	1	0	1	1	1	1	Type	I	3-dehydroquinase
Rieske	PF00355.21	gi|15922610|ref|NP_378279.1|	-	3.5e-16	58.5	0.0	3.8e-16	58.4	0.0	1.0	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Rieske_2	PF13806.1	gi|15922610|ref|NP_378279.1|	-	3.8e-10	39.4	0.0	5.2e-10	38.9	0.0	1.1	1	0	0	1	1	1	1	Rieske-like	[2Fe-2S]	domain
AnfO_nitrog	PF09582.5	gi|15922610|ref|NP_378279.1|	-	0.056	12.5	0.0	0.077	12.1	0.0	1.2	1	0	0	1	1	1	0	Iron	only	nitrogenase	protein	AnfO	(AnfO_nitrog)
DEAD_2	PF06733.10	gi|15922611|ref|NP_378280.1|	-	7.2e-27	93.8	2.1	1.3e-26	93.1	0.6	2.1	2	0	0	2	2	2	1	DEAD_2
Helicase_C_2	PF13307.1	gi|15922611|ref|NP_378280.1|	-	4.7e-25	88.4	0.0	1.2e-24	87.1	0.0	1.7	1	0	0	1	1	1	1	Helicase	C-terminal	domain
ResIII	PF04851.10	gi|15922611|ref|NP_378280.1|	-	1.1e-06	28.6	1.1	1.1e-06	28.6	0.8	3.1	2	1	1	3	3	3	1	Type	III	restriction	enzyme,	res	subunit
DEAD	PF00270.24	gi|15922611|ref|NP_378280.1|	-	2.3e-06	27.2	0.1	0.033	13.6	0.0	4.0	4	0	0	4	4	4	2	DEAD/DEAH	box	helicase
MCM	PF00493.18	gi|15922611|ref|NP_378280.1|	-	0.00022	20.1	1.5	0.00046	19.0	1.1	1.5	1	0	0	1	1	1	1	MCM2/3/5	family
DUF4238	PF14022.1	gi|15922611|ref|NP_378280.1|	-	0.0056	15.9	2.4	0.0095	15.2	1.7	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4238)
PhoH	PF02562.11	gi|15922611|ref|NP_378280.1|	-	0.0059	15.8	1.0	0.36	10.0	0.0	3.0	2	1	1	3	3	3	1	PhoH-like	protein
DUF2179	PF10035.4	gi|15922611|ref|NP_378280.1|	-	0.053	13.1	0.0	0.31	10.6	0.0	2.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2179)
AAA_22	PF13401.1	gi|15922611|ref|NP_378280.1|	-	2.8	8.0	4.5	12	5.9	0.2	3.3	3	1	1	4	4	4	0	AAA	domain
Thioredoxin_3	PF13192.1	gi|15922612|ref|NP_378281.1|	-	3.4e-08	33.1	0.0	8.5e-08	31.9	0.0	1.7	1	0	0	1	1	1	1	Thioredoxin	domain
Glutaredoxin	PF00462.19	gi|15922612|ref|NP_378281.1|	-	0.00089	19.2	0.0	0.0021	18.0	0.0	1.7	1	0	0	1	1	1	1	Glutaredoxin
Thioredoxin_4	PF13462.1	gi|15922612|ref|NP_378281.1|	-	0.011	15.7	0.0	0.025	14.6	0.0	1.6	1	0	0	1	1	1	0	Thioredoxin
TusA	PF01206.12	gi|15922613|ref|NP_378282.1|	-	0.00015	21.3	0.1	0.00015	21.2	0.0	1.3	1	1	0	1	1	1	1	Sulfurtransferase	TusA
Sod_Fe_C	PF02777.13	gi|15922615|ref|NP_378284.1|	-	1.1e-39	134.5	0.7	2.2e-39	133.5	0.5	1.4	1	0	0	1	1	1	1	Iron/manganese	superoxide	dismutases,	C-terminal	domain
Sod_Fe_N	PF00081.17	gi|15922615|ref|NP_378284.1|	-	1.1e-28	99.2	0.1	1.1e-28	99.2	0.1	2.5	3	0	0	3	3	3	1	Iron/manganese	superoxide	dismutases,	alpha-hairpin	domain
Thioredoxin_6	PF13848.1	gi|15922615|ref|NP_378284.1|	-	0.044	13.5	0.0	0.078	12.7	0.0	1.3	1	0	0	1	1	1	0	Thioredoxin-like	domain
NTP_transferase	PF00483.18	gi|15922616|ref|NP_378285.1|	-	1.6e-34	119.3	0.0	2.3e-34	118.8	0.0	1.2	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|15922616|ref|NP_378285.1|	-	6.3e-13	49.1	0.0	9.5e-13	48.5	0.0	1.3	1	1	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep	PF00132.19	gi|15922616|ref|NP_378285.1|	-	9.1e-07	28.1	2.1	0.0086	15.5	0.2	3.6	2	1	2	4	4	4	3	Bacterial	transferase	hexapeptide	(six	repeats)
GPI	PF06560.6	gi|15922616|ref|NP_378285.1|	-	0.0019	17.2	0.0	0.004	16.2	0.0	1.5	1	0	0	1	1	1	1	Glucose-6-phosphate	isomerase	(GPI)
Hexapep_2	PF14602.1	gi|15922616|ref|NP_378285.1|	-	0.0024	17.3	3.3	0.87	9.1	0.2	2.8	2	0	0	2	2	2	2	Hexapeptide	repeat	of	succinyl-transferase
GerPB	PF10803.3	gi|15922616|ref|NP_378285.1|	-	0.045	13.5	0.2	0.91	9.3	0.1	2.8	3	0	0	3	3	3	0	Spore	germination	GerPB
Fucokinase	PF07959.7	gi|15922616|ref|NP_378285.1|	-	0.054	12.0	0.0	0.086	11.3	0.0	1.4	1	0	0	1	1	1	0	L-fucokinase
Thioredox_DsbH	PF03190.10	gi|15922618|ref|NP_378287.1|	-	8.2e-67	223.9	0.0	1.4e-66	223.2	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF255
Thioredoxin_7	PF13899.1	gi|15922618|ref|NP_378287.1|	-	1.1e-18	67.0	0.0	2.1e-18	66.0	0.0	1.5	1	0	0	1	1	1	1	Thioredoxin-like
Thioredoxin_2	PF13098.1	gi|15922618|ref|NP_378287.1|	-	7.3e-07	29.3	0.0	1.7e-06	28.1	0.0	1.6	1	0	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin	PF00085.15	gi|15922618|ref|NP_378287.1|	-	2.4e-05	23.9	0.1	6e-05	22.6	0.1	1.6	1	0	0	1	1	1	1	Thioredoxin
Glyco_hydro_88	PF07470.8	gi|15922618|ref|NP_378287.1|	-	0.0054	15.8	0.2	2.4	7.0	0.1	2.3	2	0	0	2	2	2	2	Glycosyl	Hydrolase	Family	88
DUF1680	PF07944.7	gi|15922618|ref|NP_378287.1|	-	0.013	13.8	0.0	0.033	12.4	0.0	1.6	2	0	0	2	2	2	0	Putative	glycosyl	hydrolase	of	unknown	function	(DUF1680)
adh_short_C2	PF13561.1	gi|15922619|ref|NP_378288.1|	-	3.7e-15	56.3	0.1	1.1e-14	54.8	0.1	1.7	1	1	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|15922619|ref|NP_378288.1|	-	8e-15	55.1	0.0	1e-14	54.8	0.0	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
NAD_binding_10	PF13460.1	gi|15922619|ref|NP_378288.1|	-	1.4e-05	25.1	0.1	8.3e-05	22.6	0.0	2.0	2	0	0	2	2	2	1	NADH(P)-binding
KR	PF08659.5	gi|15922619|ref|NP_378288.1|	-	2.8e-05	23.8	0.1	5.4e-05	22.9	0.0	1.5	1	1	0	1	1	1	1	KR	domain
Epimerase	PF01370.16	gi|15922619|ref|NP_378288.1|	-	7.5e-05	22.2	0.2	0.00016	21.2	0.0	1.6	2	0	0	2	2	2	1	NAD	dependent	epimerase/dehydratase	family
THF_DHG_CYH_C	PF02882.14	gi|15922619|ref|NP_378288.1|	-	0.0002	20.4	0.0	0.00064	18.8	0.0	1.8	1	1	0	1	1	1	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
Shikimate_DH	PF01488.15	gi|15922619|ref|NP_378288.1|	-	0.0014	18.7	0.1	0.0022	18.0	0.1	1.5	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
F420_oxidored	PF03807.12	gi|15922619|ref|NP_378288.1|	-	0.0092	16.3	0.4	0.024	15.0	0.0	1.9	2	1	0	2	2	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
DUF460	PF04312.8	gi|15922619|ref|NP_378288.1|	-	0.01	15.3	0.1	0.02	14.4	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF460)
NAD_binding_7	PF13241.1	gi|15922619|ref|NP_378288.1|	-	0.016	15.4	0.1	0.058	13.6	0.1	1.9	2	0	0	2	2	2	0	Putative	NAD(P)-binding
NAD_binding_2	PF03446.10	gi|15922619|ref|NP_378288.1|	-	0.033	14.0	0.0	0.061	13.1	0.0	1.5	1	0	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
3HCDH_N	PF02737.13	gi|15922619|ref|NP_378288.1|	-	0.035	13.7	0.3	0.051	13.2	0.2	1.2	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_Gly3P_dh_N	PF01210.18	gi|15922619|ref|NP_378288.1|	-	0.043	13.5	0.1	0.16	11.7	0.0	2.0	1	1	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Ham1p_like	PF01725.11	gi|15922619|ref|NP_378288.1|	-	0.05	12.9	0.3	0.075	12.4	0.2	1.2	1	0	0	1	1	1	0	Ham1	family
TrkA_N	PF02254.13	gi|15922619|ref|NP_378288.1|	-	0.052	13.5	0.3	0.097	12.6	0.2	1.6	1	0	0	1	1	1	0	TrkA-N	domain
NmrA	PF05368.8	gi|15922619|ref|NP_378288.1|	-	0.055	12.7	0.5	0.12	11.6	0.3	1.5	1	1	0	1	1	1	0	NmrA-like	family
Radical_SAM	PF04055.16	gi|15922619|ref|NP_378288.1|	-	0.059	13.5	0.3	2.4	8.3	0.2	2.1	1	1	0	2	2	2	0	Radical	SAM	superfamily
Ribonuc_L-PSP	PF01042.16	gi|15922619|ref|NP_378288.1|	-	0.088	12.5	0.0	0.17	11.6	0.0	1.5	1	0	0	1	1	1	0	Endoribonuclease	L-PSP
CDC48_2	PF02933.12	gi|15922620|ref|NP_378289.1|	-	0.029	14.0	0.7	0.33	10.6	0.0	2.5	2	1	1	3	3	3	0	Cell	division	protein	48	(CDC48),	domain	2
PRANC	PF09372.5	gi|15922621|ref|NP_378290.1|	-	0.31	11.0	6.7	0.34	10.9	1.4	2.2	2	0	0	2	2	2	0	PRANC	domain
DUF91	PF01939.11	gi|15922622|ref|NP_378291.1|	-	8.3e-61	205.0	0.0	1e-60	204.7	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF91
Glycos_transf_2	PF00535.21	gi|15922623|ref|NP_378292.1|	-	3.2e-22	79.0	0.0	5.1e-22	78.3	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|15922623|ref|NP_378292.1|	-	1.3e-12	48.0	0.0	1.7e-12	47.6	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_transf_21	PF13506.1	gi|15922623|ref|NP_378292.1|	-	6.2e-12	45.1	0.0	1e-11	44.4	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_tranf_2_2	PF10111.4	gi|15922623|ref|NP_378292.1|	-	0.071	12.1	0.0	0.098	11.7	0.0	1.3	1	0	0	1	1	1	0	Glycosyltransferase	like	family	2
PRD	PF00874.15	gi|15922625|ref|NP_378294.1|	-	0.14	12.3	0.0	0.14	12.3	0.0	1.2	1	0	0	1	1	1	0	PRD	domain
CbiA	PF01656.18	gi|15922626|ref|NP_378295.1|	-	9e-32	110.0	0.3	1.1e-31	109.7	0.2	1.1	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
MipZ	PF09140.6	gi|15922626|ref|NP_378295.1|	-	1.7e-14	53.5	0.1	2.1e-14	53.2	0.1	1.1	1	0	0	1	1	1	1	ATPase	MipZ
AAA_31	PF13614.1	gi|15922626|ref|NP_378295.1|	-	1.4e-11	44.5	0.0	4.4e-06	26.6	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
ArsA_ATPase	PF02374.10	gi|15922626|ref|NP_378295.1|	-	1.3e-08	34.3	1.5	4e-06	26.0	0.1	2.3	1	1	1	2	2	2	2	Anion-transporting	ATPase
YhjQ	PF06564.7	gi|15922626|ref|NP_378295.1|	-	0.00014	21.3	0.0	0.0077	15.6	0.0	2.2	1	1	0	1	1	1	1	YhjQ	protein
Fer4_NifH	PF00142.13	gi|15922626|ref|NP_378295.1|	-	0.00068	18.9	0.1	0.0012	18.1	0.1	1.4	1	0	0	1	1	1	1	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
ParA	PF10609.4	gi|15922626|ref|NP_378295.1|	-	0.0012	18.6	0.1	0.0022	17.8	0.1	1.5	1	0	0	1	1	1	1	ParA/MinD	ATPase	like
RuvB_N	PF05496.7	gi|15922626|ref|NP_378295.1|	-	0.0042	16.1	0.3	0.0067	15.4	0.0	1.5	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
SRP54	PF00448.17	gi|15922626|ref|NP_378295.1|	-	0.013	14.9	0.3	0.094	12.1	0.1	2.1	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
ATP_bind_1	PF03029.12	gi|15922626|ref|NP_378295.1|	-	0.035	13.6	0.2	0.11	11.9	0.2	1.7	1	1	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
VirC1	PF07015.6	gi|15922626|ref|NP_378295.1|	-	0.049	12.7	0.0	0.099	11.6	0.0	1.5	1	0	0	1	1	1	0	VirC1	protein
CCG	PF02754.11	gi|15922627|ref|NP_378296.1|	-	6.3e-16	58.1	0.3	5.6e-08	32.6	0.0	2.5	2	0	0	2	2	2	2	Cysteine-rich	domain
Fer4_8	PF13183.1	gi|15922627|ref|NP_378296.1|	-	1.2e-11	44.3	6.7	2.7e-11	43.2	4.7	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|15922627|ref|NP_378296.1|	-	7.6e-11	42.2	7.5	1.8e-10	41.0	5.2	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|15922627|ref|NP_378296.1|	-	2.1e-10	40.8	5.8	4.7e-10	39.6	4.0	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|15922627|ref|NP_378296.1|	-	3.3e-09	36.4	1.7	0.002	17.9	0.2	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|15922627|ref|NP_378296.1|	-	8.3e-09	34.6	11.7	0.00015	21.2	1.5	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|15922627|ref|NP_378296.1|	-	4.9e-07	30.3	2.8	0.015	16.0	0.1	2.9	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.2	gi|15922627|ref|NP_378296.1|	-	1.3e-06	27.9	12.2	0.00028	20.6	1.1	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|15922627|ref|NP_378296.1|	-	7.9e-06	26.0	11.0	0.00042	20.5	8.4	2.6	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|15922627|ref|NP_378296.1|	-	1.1e-05	25.0	13.0	0.001	18.8	1.6	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|15922627|ref|NP_378296.1|	-	7.8e-05	23.0	10.3	0.016	15.5	1.1	2.6	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|15922627|ref|NP_378296.1|	-	8.1e-05	22.6	11.1	0.012	15.8	1.3	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|15922627|ref|NP_378296.1|	-	0.0051	16.6	10.1	0.023	14.5	7.0	2.1	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|15922627|ref|NP_378296.1|	-	0.011	16.2	17.1	0.27	11.9	3.6	2.9	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|15922627|ref|NP_378296.1|	-	0.14	12.7	4.6	2.8	8.5	0.3	2.4	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.1	gi|15922627|ref|NP_378296.1|	-	0.36	11.2	6.6	3.3	8.1	0.5	2.5	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
FAD-oxidase_C	PF02913.14	gi|15922628|ref|NP_378297.1|	-	1.6e-50	171.7	0.0	2.1e-50	171.3	0.0	1.2	1	0	0	1	1	1	1	FAD	linked	oxidases,	C-terminal	domain
FAD_binding_4	PF01565.18	gi|15922628|ref|NP_378297.1|	-	1.8e-28	98.7	0.0	2.7e-28	98.1	0.0	1.3	1	0	0	1	1	1	1	FAD	binding	domain
BBE	PF08031.7	gi|15922628|ref|NP_378297.1|	-	0.0058	16.5	0.3	0.0058	16.5	0.2	2.0	2	0	0	2	2	2	1	Berberine	and	berberine	like
FAD_binding_4	PF01565.18	gi|15922629|ref|NP_378298.1|	-	5e-15	55.1	0.0	9.5e-15	54.2	0.0	1.5	1	0	0	1	1	1	1	FAD	binding	domain
DUF647	PF04884.9	gi|15922629|ref|NP_378298.1|	-	0.12	11.5	0.0	0.19	10.8	0.0	1.2	1	0	0	1	1	1	0	Vitamin	B6	photo-protection	and	homoeostasis
TPP_enzyme_C	PF02775.16	gi|15922631|ref|NP_378300.1|	-	1.5e-30	105.7	0.1	8.6e-30	103.3	0.0	2.0	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
PFO_beta_C	PF12367.3	gi|15922631|ref|NP_378300.1|	-	1.9e-14	53.2	0.4	9.8e-14	51.0	0.3	2.0	1	1	0	1	1	1	1	Pyruvate	ferredoxin	oxidoreductase	beta	subunit	C	terminal
Peptidase_M22	PF00814.20	gi|15922631|ref|NP_378300.1|	-	0.095	12.1	0.0	0.18	11.3	0.0	1.5	1	1	0	1	1	1	0	Glycoprotease	family
DrsE	PF02635.10	gi|15922631|ref|NP_378300.1|	-	0.16	12.0	0.1	0.45	10.5	0.0	2.0	2	1	0	2	2	2	0	DsrE/DsrF-like	family
POR_N	PF01855.14	gi|15922633|ref|NP_378302.1|	-	7.1e-71	238.3	0.0	1.1e-70	237.7	0.0	1.2	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
POR	PF01558.13	gi|15922633|ref|NP_378302.1|	-	5.3e-32	111.0	0.9	1.1e-31	110.0	0.2	1.7	2	0	0	2	2	2	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
TPP_enzyme_N	PF02776.13	gi|15922633|ref|NP_378302.1|	-	1.9e-05	24.2	1.2	5.2e-05	22.7	0.8	1.9	1	1	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
CW_binding_2	PF04122.7	gi|15922633|ref|NP_378302.1|	-	0.0011	19.1	0.4	0.15	12.2	0.0	3.4	3	0	0	3	3	3	1	Putative	cell	wall	binding	repeat	2
Transketolase_C	PF02780.15	gi|15922633|ref|NP_378302.1|	-	0.0026	17.7	0.0	0.0088	15.9	0.0	1.9	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
Eco57I	PF07669.6	gi|15922634|ref|NP_378303.1|	-	0.036	14.4	1.9	0.2	12.0	0.2	2.8	1	1	2	3	3	3	0	Eco57I	restriction-modification	methylase
TLP-20	PF06088.6	gi|15922635|ref|NP_378304.1|	-	0.028	14.1	1.0	0.04	13.5	0.7	1.3	1	0	0	1	1	1	0	Nucleopolyhedrovirus	telokin-like	protein-20	(TLP20)
UXS1_N	PF11803.3	gi|15922636|ref|NP_378305.1|	-	0.05	13.3	0.0	0.086	12.6	0.0	1.4	1	0	0	1	1	1	0	UDP-glucuronate	decarboxylase	N-terminal
CBS	PF00571.23	gi|15922637|ref|NP_378306.1|	-	2.3e-43	145.7	7.8	1.1e-14	53.9	0.1	4.5	4	0	0	4	4	4	4	CBS	domain
Ribosomal_S30AE	PF02482.14	gi|15922637|ref|NP_378306.1|	-	1.9e-05	24.9	2.3	4.4e-05	23.8	1.6	1.6	1	0	0	1	1	1	1	Sigma	54	modulation	protein	/	S30EA	ribosomal	protein
H_kinase_N	PF12282.3	gi|15922637|ref|NP_378306.1|	-	0.0073	15.9	0.9	0.16	11.5	0.1	2.6	2	0	0	2	2	2	1	Signal	transduction	histidine	kinase
U-box	PF04564.10	gi|15922637|ref|NP_378306.1|	-	0.016	15.1	1.0	4.2	7.4	0.0	3.7	4	0	0	4	4	4	0	U-box	domain
Hist_deacetyl	PF00850.14	gi|15922638|ref|NP_378307.1|	-	4.7e-77	259.3	0.0	5.9e-77	259.0	0.0	1.1	1	0	0	1	1	1	1	Histone	deacetylase	domain
ATP-grasp	PF02222.17	gi|15922639|ref|NP_378308.1|	-	2e-42	144.4	0.1	3.7e-42	143.5	0.1	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|15922639|ref|NP_378308.1|	-	1.6e-23	83.3	0.1	2.9e-23	82.5	0.1	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
CPSase_L_D2	PF02786.12	gi|15922639|ref|NP_378308.1|	-	6.2e-14	51.7	0.0	1.2e-13	50.8	0.0	1.5	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Dala_Dala_lig_C	PF07478.8	gi|15922639|ref|NP_378308.1|	-	1.6e-11	44.0	0.2	3.6e-11	42.8	0.1	1.6	1	0	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
ATP-grasp_3	PF02655.9	gi|15922639|ref|NP_378308.1|	-	5.5e-10	39.3	0.2	1.1e-09	38.3	0.1	1.5	1	0	0	1	1	1	1	ATP-grasp	domain
RimK	PF08443.6	gi|15922639|ref|NP_378308.1|	-	3.4e-08	33.1	0.7	2.9e-07	30.1	0.0	2.5	2	1	0	2	2	2	1	RimK-like	ATP-grasp	domain
GARS_A	PF01071.14	gi|15922639|ref|NP_378308.1|	-	8.3e-08	32.0	0.5	8.3e-07	28.7	0.1	2.3	2	0	0	2	2	2	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
CPSase_L_chain	PF00289.17	gi|15922639|ref|NP_378308.1|	-	0.00019	21.5	0.1	0.0005	20.1	0.1	1.8	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
ATP-grasp_5	PF13549.1	gi|15922639|ref|NP_378308.1|	-	0.027	13.7	0.3	0.11	11.6	0.1	2.0	2	0	0	2	2	2	0	ATP-grasp	domain
Pyr_redox	PF00070.22	gi|15922639|ref|NP_378308.1|	-	0.23	11.9	3.2	6.5	7.2	0.3	3.3	3	1	1	4	4	4	0	Pyridine	nucleotide-disulphide	oxidoreductase
DUF4260	PF14079.1	gi|15922640|ref|NP_378309.1|	-	0.13	12.0	1.0	0.22	11.3	0.7	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4260)
PsaM	PF07465.8	gi|15922640|ref|NP_378309.1|	-	9.2	5.9	7.6	31	4.2	1.1	2.9	2	1	1	3	3	3	0	Photosystem	I	protein	M	(PsaM)
DUF4143	PF13635.1	gi|15922641|ref|NP_378310.1|	-	5.7e-05	23.2	0.4	7.6e-05	22.8	0.3	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
Telomerase_RBD	PF12009.3	gi|15922641|ref|NP_378310.1|	-	0.056	13.3	1.2	0.088	12.7	0.2	1.7	1	1	1	2	2	2	0	Telomerase	ribonucleoprotein	complex	-	RNA	binding	domain
NUMOD1	PF07453.8	gi|15922641|ref|NP_378310.1|	-	0.24	11.3	3.9	2.6	7.9	0.2	3.3	3	0	0	3	3	3	0	NUMOD1	domain
Caps_synth_CapC	PF14102.1	gi|15922642|ref|NP_378311.1|	-	3.4	7.8	12.8	0.55	10.3	3.8	2.5	2	1	1	3	3	3	0	Capsule	biosynthesis	CapC
DAO	PF01266.19	gi|15922645|ref|NP_378314.1|	-	5.7e-18	64.9	0.0	7.9e-11	41.4	0.0	2.1	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.9	gi|15922645|ref|NP_378314.1|	-	0.0017	18.2	0.2	0.0037	17.1	0.1	1.4	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
UDPG_MGDP_dh_N	PF03721.9	gi|15922645|ref|NP_378314.1|	-	0.011	15.1	0.2	0.032	13.6	0.2	1.7	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
ApbA	PF02558.11	gi|15922645|ref|NP_378314.1|	-	0.025	14.0	0.0	0.042	13.2	0.0	1.4	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
Pyr_redox	PF00070.22	gi|15922645|ref|NP_378314.1|	-	0.071	13.5	0.0	0.16	12.3	0.0	1.6	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
MoCF_biosynth	PF00994.19	gi|15922647|ref|NP_378316.1|	-	3.6e-33	113.9	0.1	4.1e-33	113.8	0.1	1.0	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
Fer4_8	PF13183.1	gi|15922648|ref|NP_378317.1|	-	5.2e-09	36.0	5.5	9.7e-09	35.1	3.8	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|15922648|ref|NP_378317.1|	-	6.5e-08	32.2	9.6	9.9e-07	28.4	7.5	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|15922648|ref|NP_378317.1|	-	1.4e-07	31.7	4.7	0.007	16.7	0.8	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|15922648|ref|NP_378317.1|	-	2.3e-07	30.9	9.3	3.6e-05	23.9	8.6	2.3	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|15922648|ref|NP_378317.1|	-	3.3e-07	29.6	17.5	0.0012	18.3	3.5	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|15922648|ref|NP_378317.1|	-	5.1e-07	29.5	11.5	0.0014	18.7	1.2	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|15922648|ref|NP_378317.1|	-	1.3e-06	28.6	7.8	4.3e-06	26.9	5.5	1.9	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|15922648|ref|NP_378317.1|	-	1.7e-06	28.6	6.1	0.0056	17.3	0.3	2.5	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_7	PF12838.2	gi|15922648|ref|NP_378317.1|	-	1.7e-06	28.2	10.1	5.2e-06	26.7	7.0	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|15922648|ref|NP_378317.1|	-	3.2e-06	26.7	17.6	0.0038	17.0	2.8	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|15922648|ref|NP_378317.1|	-	4e-06	26.4	13.7	0.00071	19.3	1.6	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|15922648|ref|NP_378317.1|	-	4.2e-06	26.9	18.3	0.0072	16.8	3.1	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_13	PF13370.1	gi|15922648|ref|NP_378317.1|	-	8.8e-05	22.8	4.4	0.088	13.2	0.2	2.5	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_15	PF13459.1	gi|15922648|ref|NP_378317.1|	-	9e-05	22.9	3.2	0.12	12.9	0.2	2.4	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_21	PF14697.1	gi|15922648|ref|NP_378317.1|	-	0.033	14.0	10.8	0.085	12.7	7.5	1.7	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
DEAD	PF00270.24	gi|15922649|ref|NP_378318.1|	-	1.7e-26	92.7	0.0	3.6e-26	91.6	0.0	1.5	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|15922649|ref|NP_378318.1|	-	3.9e-17	61.8	0.0	1.7e-14	53.4	0.0	2.6	2	0	0	2	2	2	2	Helicase	conserved	C-terminal	domain
DUF1998	PF09369.5	gi|15922649|ref|NP_378318.1|	-	1e-12	48.3	0.2	3e-12	46.9	0.1	1.9	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1998)
ResIII	PF04851.10	gi|15922649|ref|NP_378318.1|	-	5.6e-08	32.8	0.0	3e-07	30.4	0.0	2.2	2	1	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
SecA_DEAD	PF07517.9	gi|15922649|ref|NP_378318.1|	-	1.9e-05	24.0	0.0	3.9e-05	23.0	0.0	1.4	1	0	0	1	1	1	1	SecA	DEAD-like	domain
AAA_19	PF13245.1	gi|15922649|ref|NP_378318.1|	-	0.029	14.0	0.0	0.075	12.7	0.0	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_11	PF13086.1	gi|15922649|ref|NP_378318.1|	-	0.063	12.8	0.0	0.099	12.2	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
T2SE	PF00437.15	gi|15922649|ref|NP_378318.1|	-	0.14	11.0	0.0	0.24	10.2	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
QueC	PF06508.8	gi|15922650|ref|NP_378319.1|	-	2.5e-61	206.6	0.0	3.5e-61	206.1	0.0	1.2	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
GATase_7	PF13537.1	gi|15922650|ref|NP_378319.1|	-	3.5e-15	55.8	0.0	7.3e-15	54.8	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_6	PF13522.1	gi|15922650|ref|NP_378319.1|	-	7.5e-12	45.3	0.0	1.6e-11	44.3	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
ThiI	PF02568.9	gi|15922650|ref|NP_378319.1|	-	2.4e-10	40.2	0.0	1.5e-09	37.5	0.0	2.3	2	1	0	2	2	2	1	Thiamine	biosynthesis	protein	(ThiI)
tRNA_Me_trans	PF03054.11	gi|15922650|ref|NP_378319.1|	-	1.1e-06	27.5	0.0	9.9e-06	24.3	0.0	2.4	3	0	0	3	3	3	1	tRNA	methyl	transferase
Asn_synthase	PF00733.16	gi|15922650|ref|NP_378319.1|	-	5.6e-05	22.7	0.0	9.4e-05	22.0	0.0	1.2	1	0	0	1	1	1	1	Asparagine	synthase
GATase_2	PF00310.16	gi|15922650|ref|NP_378319.1|	-	0.00026	19.7	0.0	0.046	12.4	0.0	2.5	1	1	1	3	3	3	2	Glutamine	amidotransferases	class-II
ATP_bind_3	PF01171.15	gi|15922650|ref|NP_378319.1|	-	0.00046	19.7	0.0	0.00076	19.0	0.0	1.3	1	0	0	1	1	1	1	PP-loop	family
NAD_synthase	PF02540.12	gi|15922650|ref|NP_378319.1|	-	0.027	13.3	0.1	0.26	10.1	0.0	2.1	2	0	0	2	2	2	0	NAD	synthase
Cullin_Nedd8	PF10557.4	gi|15922651|ref|NP_378320.1|	-	0.00094	18.9	0.1	0.21	11.4	0.0	2.0	2	0	0	2	2	2	2	Cullin	protein	neddylation	domain
DUF2582	PF10771.4	gi|15922651|ref|NP_378320.1|	-	0.0014	18.4	0.0	0.0018	18.0	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2582)
PCI	PF01399.22	gi|15922651|ref|NP_378320.1|	-	0.0034	17.6	0.3	0.0038	17.5	0.2	1.1	1	0	0	1	1	1	1	PCI	domain
Rio2_N	PF09202.6	gi|15922651|ref|NP_378320.1|	-	0.014	15.4	0.0	0.015	15.3	0.0	1.1	1	0	0	1	1	1	0	Rio2,	N-terminal
DUF977	PF06163.6	gi|15922651|ref|NP_378320.1|	-	0.017	14.8	0.0	0.02	14.6	0.0	1.0	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF977)
Rep_2	PF01719.12	gi|15922651|ref|NP_378320.1|	-	0.048	13.1	0.2	0.052	13.0	0.1	1.0	1	0	0	1	1	1	0	Plasmid	replication	protein
TrmB	PF01978.14	gi|15922651|ref|NP_378320.1|	-	0.068	12.8	0.1	0.085	12.5	0.0	1.2	1	1	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
z-alpha	PF02295.12	gi|15922651|ref|NP_378320.1|	-	0.1	12.4	0.1	0.12	12.1	0.1	1.1	1	0	0	1	1	1	0	Adenosine	deaminase	z-alpha	domain
Stork_head	PF10264.4	gi|15922651|ref|NP_378320.1|	-	0.11	12.6	0.0	0.26	11.5	0.0	1.7	1	1	0	1	1	1	0	Winged	helix	Storkhead-box1	domain
DUF308	PF03729.8	gi|15922652|ref|NP_378321.1|	-	0.022	14.7	7.2	0.022	14.7	5.0	2.1	2	1	0	2	2	2	0	Short	repeat	of	unknown	function	(DUF308)
DUF3611	PF12263.3	gi|15922652|ref|NP_378321.1|	-	0.055	12.8	6.3	0.19	11.1	0.7	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3611)
Herpes_LMP1	PF05297.6	gi|15922652|ref|NP_378321.1|	-	0.61	8.9	9.9	0.75	8.6	6.9	1.1	1	0	0	1	1	1	0	Herpesvirus	latent	membrane	protein	1	(LMP1)
DUF4233	PF14017.1	gi|15922652|ref|NP_378321.1|	-	2	8.3	4.7	1.1	9.2	0.3	2.1	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF4233)
AAA_assoc_C	PF09821.4	gi|15922653|ref|NP_378322.1|	-	1.7e-33	115.4	0.2	4.7e-33	114.0	0.0	1.6	2	0	0	2	2	2	1	C-terminal	AAA-associated	domain
VIT1	PF01988.14	gi|15922654|ref|NP_378323.1|	-	1.8e-55	187.7	1.1	2e-55	187.5	0.8	1.0	1	0	0	1	1	1	1	VIT	family
DUF2207	PF09972.4	gi|15922654|ref|NP_378323.1|	-	0.018	13.6	0.3	0.023	13.2	0.2	1.2	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
Lactamase_B	PF00753.22	gi|15922655|ref|NP_378324.1|	-	1.2e-09	38.1	1.2	1.3e-07	31.5	0.3	2.3	2	1	0	2	2	2	2	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|15922655|ref|NP_378324.1|	-	7.6e-09	35.3	0.1	1e-08	35.0	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|15922655|ref|NP_378324.1|	-	4.9e-06	26.3	0.0	7.1e-06	25.8	0.0	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
DHH	PF01368.15	gi|15922655|ref|NP_378324.1|	-	2.2	7.9	6.9	11	5.6	4.6	2.2	1	1	1	2	2	2	0	DHH	family
Peptidase_M24	PF00557.19	gi|15922656|ref|NP_378325.1|	-	1.6e-59	201.0	0.1	2.1e-59	200.5	0.1	1.2	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.13	gi|15922656|ref|NP_378325.1|	-	1.6e-17	64.2	0.0	2.7e-17	63.5	0.0	1.4	1	0	0	1	1	1	1	Creatinase/Prolidase	N-terminal	domain
DUF2872	PF11071.3	gi|15922656|ref|NP_378325.1|	-	0.015	15.1	0.0	0.036	13.9	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2872)
Hist_deacetyl	PF00850.14	gi|15922657|ref|NP_378326.1|	-	4.8e-62	210.0	0.0	6e-62	209.7	0.0	1.0	1	0	0	1	1	1	1	Histone	deacetylase	domain
OrfB_Zn_ribbon	PF07282.6	gi|15922658|ref|NP_378327.1|	-	5.3e-21	74.0	0.0	8.8e-21	73.3	0.0	1.4	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|15922658|ref|NP_378327.1|	-	0.0048	16.3	0.1	0.0063	15.9	0.0	1.3	1	0	0	1	1	1	1	Probable	transposase
DZR	PF12773.2	gi|15922658|ref|NP_378327.1|	-	0.014	15.2	0.3	0.022	14.5	0.2	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
TF_Zn_Ribbon	PF08271.7	gi|15922658|ref|NP_378327.1|	-	0.033	13.5	0.4	6	6.2	0.0	2.6	2	0	0	2	2	2	0	TFIIB	zinc-binding
zf-ribbon_3	PF13248.1	gi|15922658|ref|NP_378327.1|	-	0.036	13.2	4.0	2	7.7	0.2	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|15922658|ref|NP_378327.1|	-	0.39	10.2	4.6	2	7.9	0.4	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
GATase_4	PF13230.1	gi|15922659|ref|NP_378328.1|	-	3.1e-06	26.0	0.0	3.7e-06	25.8	0.0	1.1	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
GATase_6	PF13522.1	gi|15922659|ref|NP_378328.1|	-	0.00025	20.9	0.0	0.00039	20.3	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
Lactamase_B_2	PF12706.2	gi|15922660|ref|NP_378329.1|	-	7.6e-20	71.2	0.4	9.9e-20	70.9	0.3	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|15922660|ref|NP_378329.1|	-	2.4e-13	50.2	0.9	1.5e-12	47.5	0.6	1.9	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Transketolase_N	PF00456.16	gi|15922660|ref|NP_378329.1|	-	0.11	11.3	0.0	0.21	10.3	0.0	1.4	1	1	0	1	1	1	0	Transketolase,	thiamine	diphosphate	binding	domain
PDEase_II	PF02112.10	gi|15922660|ref|NP_378329.1|	-	1.2	8.0	6.7	2.2	7.0	1.2	2.7	1	1	1	3	3	3	0	cAMP	phosphodiesterases	class-II
PfkB	PF00294.19	gi|15922661|ref|NP_378330.1|	-	9e-57	192.4	0.7	1.3e-56	191.9	0.5	1.2	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Phos_pyr_kin	PF08543.7	gi|15922661|ref|NP_378330.1|	-	1.1e-09	37.9	0.0	1.5e-09	37.4	0.0	1.3	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
Carb_kinase	PF01256.12	gi|15922661|ref|NP_378330.1|	-	0.0012	18.1	0.0	0.0024	17.2	0.0	1.4	1	0	0	1	1	1	1	Carbohydrate	kinase
Phos_pyr_kin	PF08543.7	gi|15922662|ref|NP_378331.1|	-	4.4e-82	274.9	0.4	5.4e-82	274.6	0.3	1.1	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
PfkB	PF00294.19	gi|15922662|ref|NP_378331.1|	-	8.1e-18	64.5	0.1	1.3e-17	63.9	0.1	1.2	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Carb_kinase	PF01256.12	gi|15922662|ref|NP_378331.1|	-	6.8e-09	35.3	0.2	1e-08	34.7	0.2	1.3	1	0	0	1	1	1	1	Carbohydrate	kinase
PS_pyruv_trans	PF04230.8	gi|15922662|ref|NP_378331.1|	-	0.044	13.4	1.0	1.4	8.5	0.4	2.2	2	0	0	2	2	2	0	Polysaccharide	pyruvyl	transferase
Aldolase_2	PF10120.4	gi|15922662|ref|NP_378331.1|	-	0.046	13.0	0.0	0.21	10.9	0.0	2.0	1	1	1	2	2	2	0	Putative	aldolase
PDDEXK_1	PF12705.2	gi|15922663|ref|NP_378332.1|	-	2.9e-13	49.8	0.9	7.3e-10	38.6	0.9	2.7	1	1	1	2	2	2	2	PD-(D/E)XK	nuclease	superfamily
Cas_Cas4	PF01930.12	gi|15922663|ref|NP_378332.1|	-	9.2e-11	41.9	0.3	1.1e-10	41.6	0.2	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF83
PDDEXK_3	PF13366.1	gi|15922663|ref|NP_378332.1|	-	9.1e-08	32.1	0.4	2.2e-07	30.9	0.2	1.5	1	1	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
Glyco_tranf_2_3	PF13641.1	gi|15922664|ref|NP_378333.1|	-	2.3e-47	161.7	0.0	2.9e-47	161.4	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|15922664|ref|NP_378333.1|	-	7.3e-32	110.6	0.4	1.1e-31	110.1	0.3	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glycos_transf_2	PF00535.21	gi|15922664|ref|NP_378333.1|	-	9.5e-31	106.7	0.1	1.4e-30	106.1	0.1	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.1	gi|15922664|ref|NP_378333.1|	-	8.6e-16	57.7	0.0	1.9e-15	56.6	0.0	1.5	2	0	0	2	2	2	1	Glycosyl	transferase	family	21
Glyco_tranf_2_2	PF10111.4	gi|15922664|ref|NP_378333.1|	-	2e-13	50.1	0.0	4.1e-13	49.0	0.0	1.5	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Cellulose_synt	PF03552.9	gi|15922664|ref|NP_378333.1|	-	0.0002	19.8	5.0	0.00029	19.2	3.4	1.2	1	0	0	1	1	1	1	Cellulose	synthase
GNT-I	PF03071.10	gi|15922664|ref|NP_378333.1|	-	0.0024	16.4	0.1	0.0035	15.9	0.1	1.1	1	0	0	1	1	1	1	GNT-I	family
Glyco_tranf_2_4	PF13704.1	gi|15922664|ref|NP_378333.1|	-	0.011	16.0	0.0	0.019	15.2	0.0	1.4	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
Chitin_synth_2	PF03142.10	gi|15922664|ref|NP_378333.1|	-	0.028	12.8	6.3	6.1	5.0	1.8	3.3	2	1	0	3	3	3	0	Chitin	synthase
PsbX	PF06596.6	gi|15922664|ref|NP_378333.1|	-	0.067	12.8	1.8	7.1	6.3	0.4	2.8	2	0	0	2	2	2	0	Photosystem	II	reaction	centre	X	protein	(PsbX)
DUF3363	PF11843.3	gi|15922664|ref|NP_378333.1|	-	0.074	11.6	0.0	0.099	11.2	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3363)
Aminotran_1_2	PF00155.16	gi|15922665|ref|NP_378334.1|	-	2.5e-25	89.2	0.0	2.8e-25	89.0	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_MocR	PF12897.2	gi|15922665|ref|NP_378334.1|	-	4.4e-07	28.8	0.0	6.9e-07	28.1	0.0	1.2	1	0	0	1	1	1	1	Alanine-glyoxylate	amino-transferase
OCD_Mu_crystall	PF02423.10	gi|15922666|ref|NP_378335.1|	-	4.5e-46	157.0	0.0	5.8e-46	156.7	0.0	1.1	1	0	0	1	1	1	1	Ornithine	cyclodeaminase/mu-crystallin	family
Shikimate_DH	PF01488.15	gi|15922666|ref|NP_378335.1|	-	0.0013	18.8	0.1	0.0024	17.9	0.1	1.4	1	1	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
GFO_IDH_MocA	PF01408.17	gi|15922666|ref|NP_378335.1|	-	0.011	16.2	0.0	0.021	15.3	0.0	1.4	1	0	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
NAD_binding_7	PF13241.1	gi|15922666|ref|NP_378335.1|	-	0.022	14.9	0.2	0.046	13.9	0.1	1.4	1	0	0	1	1	1	0	Putative	NAD(P)-binding
IlvN	PF07991.7	gi|15922666|ref|NP_378335.1|	-	0.028	13.7	0.1	0.054	12.8	0.0	1.4	1	0	0	1	1	1	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
NAD_binding_2	PF03446.10	gi|15922666|ref|NP_378335.1|	-	0.034	13.9	0.0	0.056	13.2	0.0	1.5	1	0	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
HTH_11	PF08279.7	gi|15922667|ref|NP_378336.1|	-	8.6e-07	28.5	4.3	5.1e-05	22.8	0.2	2.8	1	1	1	2	2	2	1	HTH	domain
HTH_24	PF13412.1	gi|15922667|ref|NP_378336.1|	-	1.8e-05	24.0	0.2	3.7e-05	23.0	0.2	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
FeoC	PF09012.5	gi|15922667|ref|NP_378336.1|	-	7.2e-05	22.4	0.1	0.00061	19.4	0.0	2.0	1	1	1	2	2	2	1	FeoC	like	transcriptional	regulator
MarR	PF01047.17	gi|15922667|ref|NP_378336.1|	-	0.00032	20.3	0.1	0.0013	18.4	0.0	1.9	2	0	0	2	2	2	1	MarR	family
HTH_DeoR	PF08220.7	gi|15922667|ref|NP_378336.1|	-	0.00068	19.1	0.0	0.0015	18.0	0.0	1.5	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
HTH_Mga	PF08280.6	gi|15922667|ref|NP_378336.1|	-	0.0022	17.7	1.2	0.0027	17.4	0.1	1.7	2	0	0	2	2	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
Med9	PF07544.8	gi|15922667|ref|NP_378336.1|	-	0.0039	16.9	3.8	0.08	12.6	0.9	2.2	2	0	0	2	2	2	1	RNA	polymerase	II	transcription	mediator	complex	subunit	9
HR1	PF02185.11	gi|15922667|ref|NP_378336.1|	-	0.0051	16.5	3.2	0.01	15.5	2.2	1.6	1	0	0	1	1	1	1	Hr1	repeat
HTH_5	PF01022.15	gi|15922667|ref|NP_378336.1|	-	0.0052	16.4	0.1	0.017	14.7	0.0	1.8	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
Fe_dep_repress	PF01325.14	gi|15922667|ref|NP_378336.1|	-	0.0077	16.1	0.1	0.027	14.3	0.0	1.9	2	1	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Cep57_MT_bd	PF06657.8	gi|15922667|ref|NP_378336.1|	-	0.0096	15.8	1.1	0.02	14.8	0.7	1.5	1	0	0	1	1	1	1	Centrosome	microtubule-binding	domain	of	Cep57
Bacillus_HBL	PF05791.6	gi|15922667|ref|NP_378336.1|	-	0.016	14.5	2.6	0.02	14.2	1.8	1.2	1	0	0	1	1	1	0	Bacillus	haemolytic	enterotoxin	(HBL)
HTH_20	PF12840.2	gi|15922667|ref|NP_378336.1|	-	0.016	14.9	0.0	0.2	11.4	0.0	2.0	2	0	0	2	2	2	0	Helix-turn-helix	domain
TyeA	PF09059.5	gi|15922667|ref|NP_378336.1|	-	0.017	15.0	0.2	0.064	13.2	0.1	1.8	2	0	0	2	2	2	0	TyeA
F-112	PF09645.5	gi|15922667|ref|NP_378336.1|	-	0.02	14.8	0.6	0.44	10.4	0.1	2.1	1	1	1	2	2	2	0	F-112	protein
MarR_2	PF12802.2	gi|15922667|ref|NP_378336.1|	-	0.024	14.2	0.0	0.036	13.7	0.0	1.3	1	0	0	1	1	1	0	MarR	family
TrmB	PF01978.14	gi|15922667|ref|NP_378336.1|	-	0.025	14.3	0.2	0.057	13.1	0.1	1.7	1	1	1	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
SlyX	PF04102.7	gi|15922667|ref|NP_378336.1|	-	0.027	14.8	0.2	0.051	13.9	0.2	1.5	1	0	0	1	1	1	0	SlyX
DUF1192	PF06698.6	gi|15922667|ref|NP_378336.1|	-	0.028	14.2	3.9	2	8.3	3.5	2.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1192)
RNA_pol_I_A49	PF06870.7	gi|15922667|ref|NP_378336.1|	-	0.034	12.7	1.1	0.66	8.4	0.0	2.0	1	1	1	2	2	2	0	A49-like	RNA	polymerase	I	associated	factor
HTH_Crp_2	PF13545.1	gi|15922667|ref|NP_378336.1|	-	0.037	13.8	0.0	0.078	12.7	0.0	1.6	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
HTH_IclR	PF09339.5	gi|15922667|ref|NP_378336.1|	-	0.053	13.1	0.0	0.078	12.5	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
THOC7	PF05615.8	gi|15922667|ref|NP_378336.1|	-	0.056	13.7	1.5	0.056	13.7	1.1	1.6	2	0	0	2	2	1	0	Tho	complex	subunit	7
Phage_int_SAM_1	PF02899.12	gi|15922667|ref|NP_378336.1|	-	0.062	13.4	0.0	0.13	12.4	0.0	1.6	1	1	0	1	1	1	0	Phage	integrase,	N-terminal	SAM-like	domain
DUF4140	PF13600.1	gi|15922667|ref|NP_378336.1|	-	0.071	13.5	1.5	0.091	13.2	1.0	1.4	1	1	0	1	1	1	0	N-terminal	domain	of	unknown	function	(DUF4140)
Rrf2	PF02082.15	gi|15922667|ref|NP_378336.1|	-	0.083	13.0	0.2	0.36	10.9	0.0	1.9	2	1	0	2	2	2	0	Transcriptional	regulator
DUF2250	PF10007.4	gi|15922667|ref|NP_378336.1|	-	0.085	12.7	0.3	0.085	12.7	0.2	1.8	1	1	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_26	PF13443.1	gi|15922667|ref|NP_378336.1|	-	0.095	12.9	0.2	11	6.2	0.0	2.3	2	1	1	3	3	3	0	Cro/C1-type	HTH	DNA-binding	domain
FlxA	PF14282.1	gi|15922667|ref|NP_378336.1|	-	0.11	12.4	1.0	0.18	11.7	0.7	1.4	1	0	0	1	1	1	0	FlxA-like	protein
FlaC_arch	PF05377.6	gi|15922667|ref|NP_378336.1|	-	0.12	12.2	0.7	0.31	10.9	0.5	1.7	1	0	0	1	1	1	0	Flagella	accessory	protein	C	(FlaC)
DUF4423	PF14394.1	gi|15922667|ref|NP_378336.1|	-	0.27	10.7	3.7	0.43	10.1	0.1	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4423)
DUF4618	PF15397.1	gi|15922667|ref|NP_378336.1|	-	0.27	10.5	5.2	0.28	10.4	1.1	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4618)
TEX13	PF15186.1	gi|15922667|ref|NP_378336.1|	-	0.34	10.4	2.2	0.71	9.4	0.7	1.7	1	1	1	2	2	2	0	Testis-expressed	sequence	13	protein	family
IF2_N	PF04760.10	gi|15922667|ref|NP_378336.1|	-	0.62	9.7	4.5	0.64	9.7	0.4	2.8	2	1	1	3	3	2	0	Translation	initiation	factor	IF-2,	N-terminal	region
DUF1828	PF08861.5	gi|15922667|ref|NP_378336.1|	-	0.99	9.0	3.0	1.8	8.2	0.3	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	DUF1828
DivIC	PF04977.10	gi|15922667|ref|NP_378336.1|	-	1.1	8.8	7.2	0.42	10.1	2.5	2.1	1	1	1	2	2	2	0	Septum	formation	initiator
Prefoldin_2	PF01920.15	gi|15922667|ref|NP_378336.1|	-	1.2	8.9	7.3	0.53	10.0	2.6	1.9	2	0	0	2	2	2	0	Prefoldin	subunit
DUF904	PF06005.7	gi|15922667|ref|NP_378336.1|	-	1.9	8.8	10.5	3.7	7.9	2.1	2.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF904)
Glycos_transf_2	PF00535.21	gi|15922668|ref|NP_378337.1|	-	2.4e-26	92.4	0.0	3.7e-26	91.8	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|15922668|ref|NP_378337.1|	-	9.4e-05	22.3	0.0	0.00014	21.7	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.1	gi|15922668|ref|NP_378337.1|	-	0.0035	17.6	0.0	0.0067	16.7	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
WavE	PF07507.6	gi|15922668|ref|NP_378337.1|	-	0.15	10.9	0.0	0.22	10.3	0.0	1.2	1	0	0	1	1	1	0	WavE	lipopolysaccharide	synthesis
DUF1947	PF09183.5	gi|15922669|ref|NP_378338.1|	-	3.2e-31	106.8	1.5	3.2e-31	106.8	1.0	1.9	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1947)
PUA	PF01472.15	gi|15922669|ref|NP_378338.1|	-	6.5e-15	54.6	0.2	9.3e-15	54.1	0.1	1.3	1	0	0	1	1	1	1	PUA	domain
Ald_Xan_dh_C2	PF02738.13	gi|15922670|ref|NP_378339.1|	-	1.4e-126	423.0	0.0	2e-126	422.5	0.0	1.2	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|15922670|ref|NP_378339.1|	-	1.6e-18	66.7	0.1	2.6e-16	59.6	0.0	2.6	1	1	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
Peptidase_M48	PF01435.13	gi|15922671|ref|NP_378340.1|	-	7.2e-16	58.4	2.6	4e-15	55.9	0.3	2.4	1	1	1	2	2	2	1	Peptidase	family	M48
DUF4157	PF13699.1	gi|15922671|ref|NP_378340.1|	-	0.00045	20.2	0.0	0.00074	19.6	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4157)
DUF2201_N	PF13203.1	gi|15922671|ref|NP_378340.1|	-	0.0097	15.1	0.0	0.012	14.7	0.0	1.1	1	0	0	1	1	1	1	Putative	metallopeptidase	domain
DUF955	PF06114.8	gi|15922671|ref|NP_378340.1|	-	0.01	15.5	1.3	0.047	13.4	0.9	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF955)
Peptidase_M56	PF05569.6	gi|15922671|ref|NP_378340.1|	-	0.017	14.1	0.5	0.055	12.4	0.4	1.8	1	1	0	1	1	1	0	BlaR1	peptidase	M56
Peptidase_MA_2	PF13485.1	gi|15922671|ref|NP_378340.1|	-	0.071	13.1	0.0	0.11	12.5	0.0	1.2	1	0	0	1	1	1	0	Peptidase	MA	superfamily
DUF3784	PF12650.2	gi|15922671|ref|NP_378340.1|	-	0.68	9.9	7.8	0.051	13.5	2.0	1.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3784)
ADH_N	PF08240.7	gi|15922672|ref|NP_378341.1|	-	2.6e-25	88.3	0.6	2.6e-25	88.3	0.4	1.7	2	0	0	2	2	2	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|15922672|ref|NP_378341.1|	-	2.4e-24	85.3	0.0	3.9e-24	84.6	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|15922672|ref|NP_378341.1|	-	0.0006	20.7	0.0	0.0014	19.5	0.0	1.6	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
Fer4_17	PF13534.1	gi|15922672|ref|NP_378341.1|	-	0.043	14.1	1.3	0.099	13.0	0.2	1.9	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|15922672|ref|NP_378341.1|	-	0.063	13.3	0.4	0.063	13.3	0.3	1.8	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Pribosyltran	PF00156.22	gi|15922672|ref|NP_378341.1|	-	0.065	12.9	0.1	0.67	9.6	0.0	2.2	2	0	0	2	2	2	0	Phosphoribosyl	transferase	domain
Pyr_redox_3	PF13738.1	gi|15922672|ref|NP_378341.1|	-	0.098	12.7	1.0	0.16	12.0	0.4	1.5	1	1	1	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
CobD_Cbib	PF03186.8	gi|15922673|ref|NP_378342.1|	-	5.6e-63	212.7	0.0	7.2e-63	212.3	0.0	1.1	1	0	0	1	1	1	1	CobD/Cbib	protein
TM_helix	PF05552.7	gi|15922673|ref|NP_378342.1|	-	0.079	12.6	0.2	0.079	12.6	0.1	2.9	4	0	0	4	4	4	0	Conserved	TM	helix
CobS	PF02654.10	gi|15922674|ref|NP_378343.1|	-	2.9e-33	115.4	11.7	3.5e-33	115.1	8.1	1.1	1	0	0	1	1	1	1	Cobalamin-5-phosphate	synthase
GATase_3	PF07685.9	gi|15922675|ref|NP_378344.1|	-	2.1e-26	92.4	0.0	3.4e-26	91.7	0.0	1.3	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
CbiA	PF01656.18	gi|15922675|ref|NP_378344.1|	-	9.3e-17	61.0	0.0	2.4e-16	59.7	0.0	1.7	2	0	0	2	2	2	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_26	PF13500.1	gi|15922675|ref|NP_378344.1|	-	3e-10	40.0	0.1	4.2e-09	36.2	0.0	2.2	1	1	0	1	1	1	1	AAA	domain
GATase	PF00117.23	gi|15922675|ref|NP_378344.1|	-	1.5e-05	24.4	0.0	2.5e-05	23.8	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
SNO	PF01174.14	gi|15922675|ref|NP_378344.1|	-	0.00016	21.3	0.0	0.00039	20.1	0.0	1.6	2	0	0	2	2	2	1	SNO	glutamine	amidotransferase	family
Peptidase_C26	PF07722.8	gi|15922675|ref|NP_378344.1|	-	0.034	13.5	0.0	0.28	10.5	0.1	2.4	2	1	1	3	3	3	0	Peptidase	C26
GMP_synt_C	PF00958.17	gi|15922676|ref|NP_378345.1|	-	1.1e-23	82.6	0.2	7.2e-23	80.1	0.0	2.4	1	1	1	2	2	2	1	GMP	synthase	C	terminal	domain
NAD_synthase	PF02540.12	gi|15922676|ref|NP_378345.1|	-	1.5e-12	46.9	0.2	1.6e-11	43.5	0.1	2.2	1	1	0	1	1	1	1	NAD	synthase
ATP_bind_3	PF01171.15	gi|15922676|ref|NP_378345.1|	-	9.6e-08	31.7	0.0	1.6e-07	31.0	0.0	1.3	1	0	0	1	1	1	1	PP-loop	family
QueC	PF06508.8	gi|15922676|ref|NP_378345.1|	-	8e-06	25.2	0.0	0.0025	17.1	0.0	2.3	1	1	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
ThiI	PF02568.9	gi|15922676|ref|NP_378345.1|	-	0.001	18.6	0.4	0.011	15.2	0.0	2.8	2	2	1	3	3	3	1	Thiamine	biosynthesis	protein	(ThiI)
tRNA_Me_trans	PF03054.11	gi|15922676|ref|NP_378345.1|	-	0.0025	16.4	0.0	0.44	9.0	0.0	2.3	2	0	0	2	2	2	2	tRNA	methyl	transferase
DUF2392	PF10288.4	gi|15922676|ref|NP_378345.1|	-	0.0055	17.0	0.0	0.036	14.3	0.0	2.3	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF2392)
DUF1152	PF06626.7	gi|15922676|ref|NP_378345.1|	-	0.021	13.9	0.1	0.13	11.3	0.0	2.3	2	1	0	3	3	3	0	Protein	of	unknown	function	(DUF1152)
CBS	PF00571.23	gi|15922676|ref|NP_378345.1|	-	0.028	14.2	0.0	0.075	12.8	0.0	1.7	1	0	0	1	1	1	0	CBS	domain
Peptidase_M48	PF01435.13	gi|15922677|ref|NP_378346.1|	-	2.8e-25	89.2	0.0	4.6e-25	88.5	0.0	1.4	1	1	0	1	1	1	1	Peptidase	family	M48
Peptidase_M56	PF05569.6	gi|15922677|ref|NP_378346.1|	-	0.091	11.7	0.0	0.091	11.7	0.0	2.0	3	0	0	3	3	3	0	BlaR1	peptidase	M56
DUF4131	PF13567.1	gi|15922677|ref|NP_378346.1|	-	2.5	7.4	8.0	4.8	6.5	0.9	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4131)
CBS	PF00571.23	gi|15922679|ref|NP_378348.1|	-	2.1e-33	113.8	1.9	9.9e-16	57.2	0.1	2.0	2	0	0	2	2	2	2	CBS	domain
Polysacc_synt_3	PF13440.1	gi|15922680|ref|NP_378349.1|	-	1.3e-10	41.2	35.2	1.3e-10	41.2	24.4	3.0	1	1	1	3	3	3	1	Polysaccharide	biosynthesis	protein
DeoC	PF01791.4	gi|15922681|ref|NP_378350.1|	-	4.4e-35	121.0	0.0	5.2e-35	120.8	0.0	1.1	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
ThiG	PF05690.9	gi|15922681|ref|NP_378350.1|	-	0.027	13.5	0.1	0.14	11.2	0.0	2.1	3	0	0	3	3	3	0	Thiazole	biosynthesis	protein	ThiG
GDPD_2	PF13653.1	gi|15922681|ref|NP_378350.1|	-	0.049	13.8	0.1	16	5.8	0.0	3.2	3	0	0	3	3	3	0	Glycerophosphoryl	diester	phosphodiesterase	family
PMT_2	PF13231.1	gi|15922682|ref|NP_378351.1|	-	6.2e-12	45.6	12.9	6.2e-12	45.6	9.0	3.3	3	1	0	3	3	3	2	Dolichyl-phosphate-mannose-protein	mannosyltransferase
PMT	PF02366.13	gi|15922682|ref|NP_378351.1|	-	2.7e-07	30.1	12.8	2.7e-07	30.1	8.8	4.0	1	1	3	4	4	4	2	Dolichyl-phosphate-mannose-protein	mannosyltransferase
NTP_transferase	PF00483.18	gi|15922683|ref|NP_378352.1|	-	9.8e-29	100.3	0.0	1.1e-28	100.1	0.0	1.0	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|15922683|ref|NP_378352.1|	-	5.7e-10	39.4	0.0	8.4e-10	38.9	0.0	1.4	1	1	0	1	1	1	1	MobA-like	NTP	transferase	domain
Epimerase	PF01370.16	gi|15922684|ref|NP_378353.1|	-	1.4e-24	86.7	0.0	2.6e-24	85.9	0.0	1.4	2	0	0	2	2	2	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|15922684|ref|NP_378353.1|	-	9.7e-06	24.6	0.0	2.7e-05	23.1	0.0	1.8	1	1	0	1	1	1	1	RmlD	substrate	binding	domain
Polysacc_synt_2	PF02719.10	gi|15922684|ref|NP_378353.1|	-	2.4e-05	23.3	0.1	0.00011	21.1	0.0	1.8	2	0	0	2	2	2	1	Polysaccharide	biosynthesis	protein
UDPG_MGDP_dh_N	PF03721.9	gi|15922684|ref|NP_378353.1|	-	0.00012	21.4	0.0	0.00022	20.6	0.0	1.4	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Glyco_transf_28	PF03033.15	gi|15922684|ref|NP_378353.1|	-	0.0016	18.1	0.0	0.0043	16.8	0.0	1.6	1	1	0	1	1	1	1	Glycosyltransferase	family	28	N-terminal	domain
NAD_binding_2	PF03446.10	gi|15922684|ref|NP_378353.1|	-	0.1	12.4	0.0	0.28	10.9	0.0	1.7	1	1	1	2	2	2	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
adh_short	PF00106.20	gi|15922684|ref|NP_378353.1|	-	0.18	11.7	0.0	0.32	10.9	0.0	1.3	1	0	0	1	1	1	0	short	chain	dehydrogenase
BcrAD_BadFG	PF01869.15	gi|15922685|ref|NP_378354.1|	-	7.5e-43	146.7	1.7	1e-42	146.3	1.2	1.2	1	0	0	1	1	1	1	BadF/BadG/BcrA/BcrD	ATPase	family
FGGY_N	PF00370.16	gi|15922685|ref|NP_378354.1|	-	0.044	13.0	0.0	0.073	12.3	0.0	1.3	1	0	0	1	1	1	0	FGGY	family	of	carbohydrate	kinases,	N-terminal	domain
DUF2120	PF09893.4	gi|15922685|ref|NP_378354.1|	-	0.076	12.9	0.1	0.14	12.0	0.1	1.4	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2120)
G_glu_transpept	PF01019.16	gi|15922686|ref|NP_378355.1|	-	5.7e-98	328.6	0.0	7.4e-98	328.2	0.0	1.1	1	0	0	1	1	1	1	Gamma-glutamyltranspeptidase
DUF3368	PF11848.3	gi|15922686|ref|NP_378355.1|	-	0.11	12.0	0.0	0.35	10.4	0.0	1.9	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3368)
EMP24_GP25L	PF01105.19	gi|15922687|ref|NP_378356.1|	-	0.0057	16.3	0.1	0.0072	16.0	0.1	1.1	1	0	0	1	1	1	1	emp24/gp25L/p24	family/GOLD
DUF2846	PF11008.3	gi|15922687|ref|NP_378356.1|	-	0.057	13.2	0.1	0.26	11.1	0.1	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2846)
UPF0203	PF05254.7	gi|15922687|ref|NP_378356.1|	-	0.12	12.2	0.9	0.29	10.9	0.2	1.8	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0203)
MazG	PF03819.12	gi|15922688|ref|NP_378357.1|	-	1.8e-13	50.2	0.4	2.2e-13	49.9	0.3	1.1	1	0	0	1	1	1	1	MazG	nucleotide	pyrophosphohydrolase	domain
PRA-PH	PF01503.12	gi|15922688|ref|NP_378357.1|	-	0.00034	20.8	0.3	0.00036	20.7	0.2	1.1	1	0	0	1	1	1	1	Phosphoribosyl-ATP	pyrophosphohydrolase
MazG-like	PF12643.2	gi|15922688|ref|NP_378357.1|	-	0.0013	18.6	0.4	0.0029	17.4	0.1	1.6	1	1	1	2	2	2	1	MazG-like	family
Helicase_RecD	PF05127.9	gi|15922689|ref|NP_378358.1|	-	5.8e-46	156.3	0.0	1e-45	155.5	0.0	1.4	1	0	0	1	1	1	1	Helicase
GNAT_acetyltr_2	PF13718.1	gi|15922689|ref|NP_378358.1|	-	8.5e-42	142.7	0.0	3.4e-41	140.7	0.0	1.9	1	1	0	1	1	1	1	GNAT	acetyltransferase	2
DUF1726	PF08351.6	gi|15922689|ref|NP_378358.1|	-	1.5e-24	85.4	0.2	2.1e-23	81.7	0.0	2.5	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1726)
Acetyltransf_7	PF13508.1	gi|15922689|ref|NP_378358.1|	-	2e-06	27.8	0.0	9.4e-06	25.7	0.0	2.2	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.19	gi|15922689|ref|NP_378358.1|	-	2.2e-05	24.4	0.0	9e-05	22.4	0.0	2.1	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	family
tRNA_bind_2	PF13725.1	gi|15922689|ref|NP_378358.1|	-	0.00012	22.1	0.0	0.0003	20.8	0.0	1.7	1	0	0	1	1	1	1	Possible	tRNA	binding	domain
P35	PF02331.10	gi|15922689|ref|NP_378358.1|	-	0.019	14.0	0.1	0.036	13.1	0.1	1.3	1	0	0	1	1	1	0	Apoptosis	preventing	protein
AAA_30	PF13604.1	gi|15922689|ref|NP_378358.1|	-	0.063	12.8	0.4	0.42	10.1	0.1	2.4	2	1	0	2	2	2	0	AAA	domain
COX15-CtaA	PF02628.10	gi|15922690|ref|NP_378359.1|	-	0.001	17.9	25.1	0.0093	14.8	17.3	2.4	1	1	0	1	1	1	1	Cytochrome	oxidase	assembly	protein
YwiC	PF14256.1	gi|15922690|ref|NP_378359.1|	-	0.054	13.5	11.0	0.034	14.2	2.2	2.3	2	0	0	2	2	2	0	YwiC-like	protein
DUF2970	PF11174.3	gi|15922690|ref|NP_378359.1|	-	0.57	9.7	0.1	0.57	9.7	0.0	4.0	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF2970)
Fig1	PF12351.3	gi|15922690|ref|NP_378359.1|	-	3.6	7.4	8.0	0.25	11.2	0.9	2.1	2	0	0	2	2	2	0	Ca2+	regulator	and	membrane	fusion	protein	Fig1
Utp14	PF04615.8	gi|15922691|ref|NP_378360.1|	-	0.0052	15.0	0.1	0.0061	14.7	0.1	1.0	1	0	0	1	1	1	1	Utp14	protein
Paramyxo_P	PF01806.12	gi|15922691|ref|NP_378360.1|	-	0.038	13.2	0.3	0.05	12.8	0.2	1.2	1	0	0	1	1	1	0	Paramyxovirinae	P	phosphoprotein	C-terminal	region
Spectrin	PF00435.16	gi|15922691|ref|NP_378360.1|	-	0.078	13.2	0.1	0.31	11.3	0.1	1.7	1	1	0	1	1	1	0	Spectrin	repeat
AA_permease_2	PF13520.1	gi|15922692|ref|NP_378361.1|	-	3.4e-19	68.6	56.8	6.1e-19	67.8	39.3	1.3	1	1	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|15922692|ref|NP_378361.1|	-	3.2e-12	45.5	49.9	6.1e-12	44.6	34.6	1.5	1	1	0	1	1	1	1	Amino	acid	permease
MFS_1	PF07690.11	gi|15922693|ref|NP_378362.1|	-	2.5e-32	111.9	48.2	2e-19	69.5	18.9	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_1_like	PF12832.2	gi|15922693|ref|NP_378362.1|	-	6.6e-07	29.0	18.5	0.00016	21.3	0.1	5.0	3	1	1	4	4	4	3	MFS_1	like	family
Pox_P21	PF05313.7	gi|15922693|ref|NP_378362.1|	-	0.0012	18.1	1.8	0.0012	18.1	1.2	2.2	2	1	0	2	2	2	1	Poxvirus	P21	membrane	protein
MFS_2	PF13347.1	gi|15922693|ref|NP_378362.1|	-	0.0013	17.1	30.4	0.0014	17.1	16.6	2.3	1	1	1	2	2	2	1	MFS/sugar	transport	protein
Usp	PF00582.21	gi|15922694|ref|NP_378363.1|	-	6.7e-31	107.3	0.1	7.4e-31	107.2	0.1	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
DXP_reductoisom	PF02670.11	gi|15922694|ref|NP_378363.1|	-	0.057	13.9	0.0	0.067	13.7	0.0	1.2	1	0	0	1	1	1	0	1-deoxy-D-xylulose	5-phosphate	reductoisomerase
NAD_binding_7	PF13241.1	gi|15922694|ref|NP_378363.1|	-	0.065	13.4	0.1	0.094	12.9	0.0	1.3	1	0	0	1	1	1	0	Putative	NAD(P)-binding
Sugar_tr	PF00083.19	gi|15922695|ref|NP_378364.1|	-	1.9e-52	178.3	23.5	8.6e-52	176.2	16.3	1.8	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|15922695|ref|NP_378364.1|	-	1.8e-33	115.7	38.3	1.8e-24	86.1	22.9	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_2	PF13347.1	gi|15922695|ref|NP_378364.1|	-	0.00057	18.3	30.0	0.0023	16.4	2.7	3.6	2	1	1	3	3	3	2	MFS/sugar	transport	protein
BT1	PF03092.11	gi|15922695|ref|NP_378364.1|	-	0.04	12.6	13.9	0.46	9.1	5.8	2.7	1	1	0	2	2	2	0	BT1	family
TMEM141	PF15110.1	gi|15922695|ref|NP_378364.1|	-	0.17	12.1	0.4	9.8	6.5	0.1	2.6	2	0	0	2	2	2	0	TMEM141	protein	family
Pro-kuma_activ	PF09286.6	gi|15922696|ref|NP_378365.1|	-	1e-12	48.3	0.0	2.2e-12	47.2	0.0	1.5	1	0	0	1	1	1	1	Pro-kumamolisin,	activation	domain
Peptidase_S8	PF00082.17	gi|15922696|ref|NP_378365.1|	-	1.1e-05	24.7	0.0	6.5e-05	22.2	0.0	2.1	1	1	0	1	1	1	1	Subtilase	family
DUF4098	PF13345.1	gi|15922696|ref|NP_378365.1|	-	0.35	10.8	15.8	1.1	9.2	7.7	3.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4098)
PNGaseA	PF12222.3	gi|15922697|ref|NP_378366.1|	-	9e-145	482.7	14.2	1.2e-144	482.3	9.8	1.2	1	0	0	1	1	1	1	Peptide	N-acetyl-beta-D-glucosaminyl	asparaginase	amidase	A
MR_MLE_C	PF13378.1	gi|15922698|ref|NP_378367.1|	-	6.4e-23	80.8	0.0	1.1e-22	80.1	0.0	1.4	1	0	0	1	1	1	1	Enolase	C-terminal	domain-like
MR_MLE	PF01188.16	gi|15922698|ref|NP_378367.1|	-	5.5e-16	58.8	0.0	1.3e-15	57.6	0.0	1.7	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
MR_MLE_N	PF02746.11	gi|15922698|ref|NP_378367.1|	-	6.8e-15	55.0	0.0	1.2e-14	54.2	0.0	1.4	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	N-terminal	domain
IPP-2	PF04979.9	gi|15922698|ref|NP_378367.1|	-	0.081	13.1	0.1	4.9	7.4	0.0	2.3	2	0	0	2	2	2	0	Protein	phosphatase	inhibitor	2	(IPP-2)
Metallophos	PF00149.23	gi|15922699|ref|NP_378368.1|	-	2.5e-23	82.5	1.6	3.1e-23	82.2	1.1	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|15922699|ref|NP_378368.1|	-	5e-08	32.9	0.0	6.4e-08	32.5	0.0	1.3	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
ATP-gua_PtransN	PF02807.10	gi|15922699|ref|NP_378368.1|	-	0.096	12.8	1.1	0.57	10.3	0.1	2.4	2	0	0	2	2	2	0	ATP:guanido	phosphotransferase,	N-terminal	domain
DUF3501	PF12007.3	gi|15922700|ref|NP_378369.1|	-	1.2e-63	214.2	2.7	1.4e-63	214.0	1.9	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3501)
CCG	PF02754.11	gi|15922701|ref|NP_378370.1|	-	1.1e-19	70.2	0.9	4e-11	42.7	0.0	2.9	3	0	0	3	3	3	2	Cysteine-rich	domain
Fer4_8	PF13183.1	gi|15922701|ref|NP_378370.1|	-	6.5e-06	26.0	5.9	1.5e-05	24.9	4.1	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|15922701|ref|NP_378370.1|	-	0.0004	20.6	5.2	0.0011	19.2	3.6	1.8	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|15922701|ref|NP_378370.1|	-	0.00063	19.9	7.1	0.0014	18.8	4.9	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|15922701|ref|NP_378370.1|	-	0.00065	19.4	5.0	0.19	11.6	0.5	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|15922701|ref|NP_378370.1|	-	0.01	16.1	11.4	0.022	15.0	1.2	2.5	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|15922701|ref|NP_378370.1|	-	0.01	15.7	6.8	0.8	9.7	0.6	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|15922701|ref|NP_378370.1|	-	0.029	14.7	2.8	4	7.9	0.3	2.5	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|15922701|ref|NP_378370.1|	-	0.031	13.8	10.2	0.66	9.6	1.4	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|15922701|ref|NP_378370.1|	-	0.036	13.8	10.5	0.098	12.4	2.3	2.5	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
FaeA	PF04703.7	gi|15922701|ref|NP_378370.1|	-	0.062	13.4	0.0	0.13	12.4	0.0	1.4	1	0	0	1	1	1	0	FaeA-like	protein
Fer4_17	PF13534.1	gi|15922701|ref|NP_378370.1|	-	0.15	12.4	11.8	4.1	7.8	8.5	2.6	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|15922701|ref|NP_378370.1|	-	0.83	9.6	13.3	1.1	9.2	1.2	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|15922701|ref|NP_378370.1|	-	0.95	10.0	5.5	0.59	10.7	0.1	2.4	1	1	1	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_16	PF13484.1	gi|15922701|ref|NP_378370.1|	-	8.1	7.2	11.6	2.7e+02	2.4	8.1	2.4	1	1	1	2	2	2	0	4Fe-4S	double	cluster	binding	domain
Rubrerythrin	PF02915.12	gi|15922702|ref|NP_378371.1|	-	3.3e-26	92.2	0.1	4.5e-26	91.8	0.1	1.2	1	0	0	1	1	1	1	Rubrerythrin
Ferritin	PF00210.19	gi|15922702|ref|NP_378371.1|	-	6.5e-09	35.6	0.1	0.00055	19.7	0.1	2.0	1	1	1	2	2	2	2	Ferritin-like	domain
GST_C	PF00043.20	gi|15922702|ref|NP_378371.1|	-	0.11	12.5	0.0	0.42	10.6	0.0	1.9	2	0	0	2	2	2	0	Glutathione	S-transferase,	C-terminal	domain
CBS	PF00571.23	gi|15922703|ref|NP_378372.1|	-	6.8e-32	109.0	4.1	2.3e-15	56.0	0.4	2.0	2	0	0	2	2	2	2	CBS	domain
IF3_N	PF05198.11	gi|15922703|ref|NP_378372.1|	-	0.036	14.0	2.0	0.93	9.4	0.1	2.8	2	1	1	3	3	3	0	Translation	initiation	factor	IF-3,	N-terminal	domain
DUF1840	PF08895.6	gi|15922703|ref|NP_378372.1|	-	0.081	12.9	0.3	1.9	8.5	0.1	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF1840)
HTH_24	PF13412.1	gi|15922704|ref|NP_378373.1|	-	1.4e-09	37.2	0.5	2.4e-09	36.4	0.3	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_IclR	PF09339.5	gi|15922704|ref|NP_378373.1|	-	3.3e-07	29.7	0.0	5.7e-07	29.0	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_AsnC-type	PF13404.1	gi|15922704|ref|NP_378373.1|	-	7.8e-07	28.5	0.4	1.4e-06	27.7	0.3	1.4	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_36	PF13730.1	gi|15922704|ref|NP_378373.1|	-	2.3e-06	27.6	0.3	5e-06	26.5	0.2	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|15922704|ref|NP_378373.1|	-	4.1e-06	26.4	0.7	7.7e-06	25.5	0.5	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|15922704|ref|NP_378373.1|	-	1.1e-05	25.0	0.0	1.9e-05	24.2	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_11	PF08279.7	gi|15922704|ref|NP_378373.1|	-	0.00017	21.1	0.3	0.00033	20.2	0.2	1.4	1	0	0	1	1	1	1	HTH	domain
HTH_28	PF13518.1	gi|15922704|ref|NP_378373.1|	-	0.00018	21.3	0.1	0.00035	20.5	0.1	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_27	PF13463.1	gi|15922704|ref|NP_378373.1|	-	0.00027	21.1	0.1	0.00048	20.4	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_7	PF02796.10	gi|15922704|ref|NP_378373.1|	-	0.00027	20.7	0.1	0.00061	19.6	0.1	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain	of	resolvase
HTH_23	PF13384.1	gi|15922704|ref|NP_378373.1|	-	0.00042	19.8	0.1	0.00078	19.0	0.1	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_20	PF12840.2	gi|15922704|ref|NP_378373.1|	-	0.00047	19.8	0.0	0.00096	18.9	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_29	PF13551.1	gi|15922704|ref|NP_378373.1|	-	0.0013	18.8	0.0	0.0024	18.0	0.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_5	PF01022.15	gi|15922704|ref|NP_378373.1|	-	0.0015	18.1	0.0	0.003	17.1	0.0	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_8	PF02954.14	gi|15922704|ref|NP_378373.1|	-	0.0025	17.3	0.2	0.0054	16.2	0.2	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	Fis	family
FUR	PF01475.14	gi|15922704|ref|NP_378373.1|	-	0.01	15.7	0.1	0.016	15.1	0.0	1.3	1	0	0	1	1	1	0	Ferric	uptake	regulator	family
Phage_AlpA	PF05930.7	gi|15922704|ref|NP_378373.1|	-	0.029	14.0	0.1	0.064	12.9	0.1	1.5	1	0	0	1	1	1	0	Prophage	CP4-57	regulatory	protein	(AlpA)
Sigma70_r4	PF04545.11	gi|15922704|ref|NP_378373.1|	-	0.035	13.4	0.0	0.064	12.5	0.0	1.4	1	0	0	1	1	1	0	Sigma-70,	region	4
MarR	PF01047.17	gi|15922704|ref|NP_378373.1|	-	0.056	13.1	0.1	0.12	12.0	0.0	1.5	1	0	0	1	1	1	0	MarR	family
HTH_Tnp_IS630	PF01710.11	gi|15922704|ref|NP_378373.1|	-	0.063	12.9	0.2	0.09	12.4	0.1	1.2	1	0	0	1	1	1	0	Transposase
HTH_psq	PF05225.11	gi|15922704|ref|NP_378373.1|	-	0.079	12.5	1.5	0.14	11.7	0.1	2.1	2	0	0	2	2	2	0	helix-turn-helix,	Psq	domain
TauE	PF01925.14	gi|15922705|ref|NP_378374.1|	-	1.2e-42	145.9	26.3	1.4e-42	145.7	18.2	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
DUF4311	PF14188.1	gi|15922705|ref|NP_378374.1|	-	0.0082	15.6	3.6	0.0082	15.6	2.5	1.8	2	1	0	2	2	2	1	Domain	of	unknown	function	(DUF4311)
DUF1634	PF07843.6	gi|15922707|ref|NP_378376.1|	-	1.4e-29	101.7	8.8	1.6e-29	101.6	6.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1634)
PhaG_MnhG_YufB	PF03334.9	gi|15922707|ref|NP_378376.1|	-	0.65	10.0	8.6	1.6	8.7	2.5	2.9	1	1	1	2	2	2	0	Na+/H+	antiporter	subunit
DUF788	PF05620.6	gi|15922707|ref|NP_378376.1|	-	2	8.2	4.0	4.3	7.1	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF788)
TauE	PF01925.14	gi|15922708|ref|NP_378377.1|	-	1e-40	139.7	26.4	1.2e-40	139.4	18.3	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
Potass_KdpF	PF09604.5	gi|15922709|ref|NP_378378.1|	-	2.5	8.0	4.9	4.7	7.1	3.4	1.4	1	0	0	1	1	1	0	F	subunit	of	K+-transporting	ATPase	(Potass_KdpF)
Glycos_transf_2	PF00535.21	gi|15922710|ref|NP_378379.1|	-	1e-12	48.0	0.1	1.6e-12	47.4	0.1	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|15922710|ref|NP_378379.1|	-	4.5e-06	26.6	0.0	1.3e-05	25.0	0.0	1.6	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
MS_channel	PF00924.13	gi|15922713|ref|NP_378382.1|	-	8.1e-22	77.5	7.1	8.1e-22	77.5	4.9	1.8	2	0	0	2	2	2	1	Mechanosensitive	ion	channel
Macro	PF01661.16	gi|15922714|ref|NP_378383.1|	-	3.8e-37	126.8	0.2	5.2e-37	126.3	0.1	1.2	1	0	0	1	1	1	1	Macro	domain
DUF3197	PF11432.3	gi|15922714|ref|NP_378383.1|	-	0.016	15.1	0.1	0.032	14.2	0.0	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3197)
TPR_12	PF13424.1	gi|15922716|ref|NP_378385.1|	-	1.3e-14	53.8	15.4	6.1e-08	32.4	0.5	5.7	3	1	2	6	6	5	4	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|15922716|ref|NP_378385.1|	-	1.5e-14	53.8	18.1	8.3e-14	51.4	0.9	4.1	2	2	1	3	3	3	1	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_11	PF13414.1	gi|15922716|ref|NP_378385.1|	-	3.4e-11	42.6	1.0	3.4e-11	42.6	0.7	3.8	4	1	0	4	4	3	1	TPR	repeat
TPR_8	PF13181.1	gi|15922716|ref|NP_378385.1|	-	2.2e-09	36.4	28.1	3.1e-07	29.7	0.1	7.2	8	1	1	9	9	7	2	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|15922716|ref|NP_378385.1|	-	3e-09	36.7	4.8	0.0044	17.5	0.0	6.5	3	2	5	8	8	7	1	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|15922716|ref|NP_378385.1|	-	3.9e-09	36.7	3.7	2.3e-07	31.0	0.5	5.4	2	2	4	6	6	6	2	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|15922716|ref|NP_378385.1|	-	4.1e-09	36.8	7.4	0.0066	17.0	0.0	4.5	4	0	0	4	4	4	2	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|15922716|ref|NP_378385.1|	-	1.8e-08	33.6	0.8	7.1e-07	28.6	0.0	6.3	8	1	0	8	8	6	2	Tetratricopeptide	repeat
TPR_15	PF13429.1	gi|15922716|ref|NP_378385.1|	-	3.5e-08	32.8	8.2	0.021	13.9	0.8	3.4	1	1	2	3	3	3	3	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|15922716|ref|NP_378385.1|	-	6.6e-08	32.5	17.2	0.011	16.1	0.0	6.6	8	0	0	8	8	5	2	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|15922716|ref|NP_378385.1|	-	7.9e-08	31.5	12.7	1.1e-05	24.8	0.0	5.5	5	2	0	6	6	5	1	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|15922716|ref|NP_378385.1|	-	1.2e-07	31.0	0.2	1.2e-07	31.0	0.1	5.4	7	0	0	7	7	5	2	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|15922716|ref|NP_378385.1|	-	3.8e-06	26.6	3.2	0.23	11.7	0.0	4.5	4	0	0	4	4	3	2	Tetratricopeptide	repeat
TPR_21	PF09976.4	gi|15922716|ref|NP_378385.1|	-	0.00033	20.5	2.0	0.00055	19.8	0.1	2.3	2	1	0	2	2	2	1	Tetratricopeptide	repeat
TPR_10	PF13374.1	gi|15922716|ref|NP_378385.1|	-	0.00042	20.1	10.2	0.32	11.0	0.0	5.1	6	1	1	7	7	4	2	Tetratricopeptide	repeat
Complex1_LYR_1	PF13232.1	gi|15922716|ref|NP_378385.1|	-	0.0024	18.0	0.9	0.02	15.0	0.1	2.7	2	0	0	2	2	2	1	Complex1_LYR-like
Ribosomal_L22	PF00237.14	gi|15922716|ref|NP_378385.1|	-	0.0042	16.9	0.0	0.29	11.0	0.0	3.3	1	1	1	2	2	2	1	Ribosomal	protein	L22p/L17e
TPR_9	PF13371.1	gi|15922716|ref|NP_378385.1|	-	0.011	15.6	0.0	0.088	12.6	0.0	2.6	1	1	0	1	1	1	0	Tetratricopeptide	repeat
Rapamycin_bind	PF08771.6	gi|15922716|ref|NP_378385.1|	-	0.022	14.8	4.8	7.1	6.7	0.0	4.4	3	2	3	6	6	6	0	Rapamycin	binding	domain
PPR	PF01535.15	gi|15922716|ref|NP_378385.1|	-	0.029	14.3	8.7	12	6.1	0.0	5.6	6	0	0	6	6	5	0	PPR	repeat
Rapsyn_N	PF10579.4	gi|15922716|ref|NP_378385.1|	-	0.03	14.1	0.2	0.37	10.6	0.0	2.8	2	1	0	2	2	2	0	Rapsyn	N-terminal	myristoylation	and	linker	region
PPR_2	PF13041.1	gi|15922716|ref|NP_378385.1|	-	0.044	13.7	1.6	14	5.7	0.0	4.1	3	1	1	4	4	4	0	PPR	repeat	family
DUF3775	PF12616.3	gi|15922716|ref|NP_378385.1|	-	0.056	13.2	0.1	0.33	10.7	0.1	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3775)
DNA_ligase_A_N	PF04675.9	gi|15922716|ref|NP_378385.1|	-	0.058	13.2	3.4	1.7	8.4	0.2	2.6	2	1	0	2	2	2	0	DNA	ligase	N	terminus
Apc5	PF12862.2	gi|15922716|ref|NP_378385.1|	-	0.092	12.5	1.1	3.3	7.6	0.1	3.6	2	1	1	3	3	3	0	Anaphase-promoting	complex	subunit	5
RPN7	PF10602.4	gi|15922716|ref|NP_378385.1|	-	0.11	11.8	4.6	0.038	13.3	0.4	2.5	2	1	0	2	2	2	0	26S	proteasome	subunit	RPN7
DUF2007	PF09413.5	gi|15922716|ref|NP_378385.1|	-	0.19	11.5	1.4	50	3.8	0.0	3.7	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF2007)
TPR_20	PF14561.1	gi|15922716|ref|NP_378385.1|	-	0.26	11.4	6.8	1.3	9.2	0.2	3.5	3	1	1	4	4	3	0	Tetratricopeptide	repeat
DUF627	PF04781.7	gi|15922716|ref|NP_378385.1|	-	0.59	9.7	6.2	22	4.7	0.1	4.3	4	2	2	6	6	5	0	Protein	of	unknown	function	(DUF627)
Syntaxin-6_N	PF09177.6	gi|15922716|ref|NP_378385.1|	-	1.6	9.1	4.9	5.3	7.5	0.5	3.0	2	2	0	2	2	2	0	Syntaxin	6,	N-terminal
TC1	PF15063.1	gi|15922716|ref|NP_378385.1|	-	2.8	7.5	5.1	20	4.8	0.1	3.8	3	1	0	4	4	4	0	Thyroid	cancer	protein	1
MSA-2c	PF12238.3	gi|15922716|ref|NP_378385.1|	-	3.4	7.2	8.3	0.41	10.2	1.7	2.3	2	1	0	2	2	2	0	Merozoite	surface	antigen	2c
Glycos_transf_1	PF00534.15	gi|15922717|ref|NP_378386.1|	-	3.5e-34	117.6	0.3	1.1e-33	116.1	0.1	1.8	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|15922717|ref|NP_378386.1|	-	7.7e-22	77.8	0.7	1.1e-21	77.2	0.5	1.3	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_1_4	PF13692.1	gi|15922717|ref|NP_378386.1|	-	2e-15	57.1	0.0	3.9e-15	56.2	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|15922717|ref|NP_378386.1|	-	1.4e-09	38.0	0.0	3.8e-09	36.6	0.0	1.8	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.1	gi|15922717|ref|NP_378386.1|	-	7.6e-06	26.1	0.0	5.2e-05	23.4	0.0	2.1	1	1	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Epimerase_2	PF02350.14	gi|15922717|ref|NP_378386.1|	-	0.0027	16.5	0.2	0.014	14.1	0.0	2.0	2	0	0	2	2	2	1	UDP-N-acetylglucosamine	2-epimerase
MarR	PF01047.17	gi|15922719|ref|NP_378388.1|	-	2e-15	56.2	0.0	3.2e-15	55.5	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.1	gi|15922719|ref|NP_378388.1|	-	3.6e-11	43.2	0.0	5.3e-11	42.6	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|15922719|ref|NP_378388.1|	-	5.4e-10	38.8	0.1	8.6e-10	38.1	0.1	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|15922719|ref|NP_378388.1|	-	4.2e-09	35.9	0.0	5.8e-09	35.4	0.0	1.2	1	0	0	1	1	1	1	MarR	family
HTH_45	PF14947.1	gi|15922719|ref|NP_378388.1|	-	1.4e-06	27.9	0.6	2.9e-06	26.9	0.3	1.6	1	1	0	1	1	1	1	Winged	helix-turn-helix
HTH_5	PF01022.15	gi|15922719|ref|NP_378388.1|	-	2.6e-05	23.7	0.0	0.00065	19.3	0.0	2.4	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_34	PF13601.1	gi|15922719|ref|NP_378388.1|	-	4.5e-05	23.4	0.1	6e-05	23.0	0.1	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
PadR	PF03551.9	gi|15922719|ref|NP_378388.1|	-	0.00047	19.8	0.0	0.00074	19.2	0.0	1.3	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
DUF3116	PF11313.3	gi|15922719|ref|NP_378388.1|	-	0.0008	18.9	0.4	0.003	17.1	0.1	2.0	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF3116)
HTH_24	PF13412.1	gi|15922719|ref|NP_378388.1|	-	0.0024	17.2	0.0	0.014	14.7	0.0	2.2	1	1	1	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_Crp_2	PF13545.1	gi|15922719|ref|NP_378388.1|	-	0.0024	17.6	0.0	0.0038	16.9	0.0	1.4	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HxlR	PF01638.12	gi|15922719|ref|NP_378388.1|	-	0.0052	16.3	0.1	0.0083	15.7	0.1	1.4	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
Peptidase_A25	PF03418.9	gi|15922719|ref|NP_378388.1|	-	0.0081	14.9	0.2	0.011	14.5	0.1	1.2	1	0	0	1	1	1	1	Germination	protease
Fe_dep_repress	PF01325.14	gi|15922719|ref|NP_378388.1|	-	0.0098	15.8	0.0	0.015	15.2	0.0	1.3	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DUF2513	PF10711.4	gi|15922719|ref|NP_378388.1|	-	0.011	15.8	0.0	0.016	15.2	0.0	1.4	1	0	0	1	1	1	0	Hypothetical	protein	(DUF2513)
DUF4303	PF14136.1	gi|15922719|ref|NP_378388.1|	-	0.022	14.3	0.1	0.034	13.7	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4303)
Glyco_hydro_67N	PF03648.9	gi|15922719|ref|NP_378388.1|	-	0.026	14.5	0.0	0.035	14.1	0.0	1.2	1	0	0	1	1	1	0	Glycosyl	hydrolase	family	67	N-terminus
MMS19_N	PF14500.1	gi|15922719|ref|NP_378388.1|	-	0.05	12.8	0.1	0.062	12.5	0.1	1.1	1	0	0	1	1	1	0	Dos2-interacting	transcription	regulator	of	RNA-Pol-II
Rrf2	PF02082.15	gi|15922719|ref|NP_378388.1|	-	0.051	13.7	0.0	0.093	12.8	0.0	1.4	1	0	0	1	1	1	0	Transcriptional	regulator
Penicillinase_R	PF03965.11	gi|15922719|ref|NP_378388.1|	-	0.07	13.2	0.1	0.12	12.4	0.0	1.7	1	1	0	1	1	1	0	Penicillinase	repressor
GntR	PF00392.16	gi|15922719|ref|NP_378388.1|	-	0.11	11.9	0.0	0.2	11.0	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
Ead_Ea22	PF13935.1	gi|15922719|ref|NP_378388.1|	-	0.12	12.6	0.0	0.14	12.4	0.0	1.2	1	0	0	1	1	1	0	Ead/Ea22-like	protein
PIG-P	PF08510.7	gi|15922720|ref|NP_378389.1|	-	1.6	8.3	13.7	16	5.1	9.5	2.5	2	0	0	2	2	2	0	PIG-P
Molydop_binding	PF01568.16	gi|15922722|ref|NP_378391.1|	-	4.5e-13	48.9	0.1	9.6e-13	47.9	0.0	1.6	1	0	0	1	1	1	1	Molydopterin	dinucleotide	binding	domain
DUF4298	PF14131.1	gi|15922722|ref|NP_378391.1|	-	0.012	15.4	0.9	0.036	13.9	0.7	1.8	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4298)
Rieske	PF00355.21	gi|15922723|ref|NP_378392.1|	-	4.1e-08	32.6	0.1	7.6e-08	31.8	0.0	1.6	1	1	0	1	1	1	1	Rieske	[2Fe-2S]	domain
UCR_Fe-S_N	PF10399.4	gi|15922723|ref|NP_378392.1|	-	0.002	17.2	0.4	0.0038	16.3	0.2	1.4	1	0	0	1	1	1	1	Ubiquitinol-cytochrome	C	reductase	Fe-S	subunit	TAT	signal
DUF2613	PF11021.3	gi|15922723|ref|NP_378392.1|	-	0.5	10.1	4.0	0.96	9.2	2.6	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2613)
HEV_ORF1	PF02444.11	gi|15922723|ref|NP_378392.1|	-	1.2	9.3	4.7	15	5.8	1.5	2.5	2	1	1	3	3	3	0	Hepatitis	E	virus	ORF-2	(Putative	capsid	protein)
SoxE	PF06525.6	gi|15922724|ref|NP_378393.1|	-	7e-71	237.5	26.6	1.6e-70	236.3	18.4	1.5	1	1	0	1	1	1	1	Sulfocyanin	(SoxE)
Copper-bind	PF00127.15	gi|15922724|ref|NP_378393.1|	-	0.00026	21.1	0.0	0.00069	19.8	0.0	1.7	1	1	0	1	1	1	1	Copper	binding	proteins,	plastocyanin/azurin	family
DUF2500	PF10694.4	gi|15922724|ref|NP_378393.1|	-	0.11	12.5	0.4	0.17	11.8	0.3	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2500)
Mucin	PF01456.12	gi|15922724|ref|NP_378393.1|	-	0.12	12.1	35.7	0.21	11.3	24.8	1.4	1	0	0	1	1	1	0	Mucin-like	glycoprotein
Cu-oxidase_2	PF07731.9	gi|15922724|ref|NP_378393.1|	-	0.31	10.5	1.5	1.1	8.7	0.0	2.3	3	0	0	3	3	3	0	Multicopper	oxidase
Alpha_GJ	PF03229.8	gi|15922724|ref|NP_378393.1|	-	4.1	7.7	14.7	7	7.0	10.2	1.4	1	0	0	1	1	1	0	Alphavirus	glycoprotein	J
Telomere_Sde2	PF13019.1	gi|15922724|ref|NP_378393.1|	-	4.1	7.0	4.9	5.6	6.6	3.4	1.2	1	0	0	1	1	1	0	Telomere	stability	and	silencing
SoxE	PF06525.6	gi|15922725|ref|NP_378394.1|	-	1.2e-70	236.7	14.7	1.4e-70	236.6	10.2	1.0	1	0	0	1	1	1	1	Sulfocyanin	(SoxE)
Copper-bind	PF00127.15	gi|15922725|ref|NP_378394.1|	-	0.00029	21.0	0.0	0.00063	19.9	0.0	1.5	1	1	0	1	1	1	1	Copper	binding	proteins,	plastocyanin/azurin	family
SSP160	PF06933.6	gi|15922725|ref|NP_378394.1|	-	0.21	9.5	14.9	0.012	13.6	6.9	1.3	2	0	0	2	2	2	0	Special	lobe-specific	silk	protein	SSP160
DUF3439	PF11921.3	gi|15922725|ref|NP_378394.1|	-	3.1	7.5	14.6	7.3	6.3	10.1	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3439)
COX2	PF00116.15	gi|15922726|ref|NP_378395.1|	-	3.3e-10	39.8	0.1	4.5e-10	39.3	0.1	1.2	1	0	0	1	1	1	1	Cytochrome	C	oxidase	subunit	II,	periplasmic	domain
Y_Y_Y	PF07495.8	gi|15922726|ref|NP_378395.1|	-	0.053	13.2	0.1	0.21	11.3	0.0	2.0	2	0	0	2	2	2	0	Y_Y_Y	domain
DUF3317	PF11779.3	gi|15922726|ref|NP_378395.1|	-	0.071	12.5	2.4	0.48	9.9	0.3	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3317)
COX1	PF00115.15	gi|15922727|ref|NP_378396.1|	-	1.3e-82	277.8	67.5	1.8e-82	277.3	46.8	1.1	1	0	0	1	1	1	1	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
DUF1404	PF07185.6	gi|15922728|ref|NP_378397.1|	-	5.7e-61	204.9	18.3	6.4e-61	204.8	12.7	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1404)
UPF0640	PF15114.1	gi|15922728|ref|NP_378397.1|	-	1.8	8.0	4.2	21	4.7	0.1	2.5	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0640
MFS_1	PF07690.11	gi|15922731|ref|NP_378400.1|	-	2.3e-23	82.5	32.4	1.8e-14	53.2	11.4	2.2	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|15922731|ref|NP_378400.1|	-	0.00022	19.9	18.0	0.0037	15.8	5.7	2.4	1	1	1	3	3	3	2	Sugar	(and	other)	transporter
Radical_SAM	PF04055.16	gi|15922732|ref|NP_378401.1|	-	5.9e-20	72.1	0.1	5.7e-19	68.8	0.0	2.4	3	0	0	3	3	3	1	Radical	SAM	superfamily
B12-binding	PF02310.14	gi|15922732|ref|NP_378401.1|	-	1.7e-05	24.6	0.0	3.3e-05	23.7	0.0	1.4	1	0	0	1	1	1	1	B12	binding	domain
GDPD_2	PF13653.1	gi|15922732|ref|NP_378401.1|	-	0.0077	16.3	0.7	0.46	10.7	0.0	2.9	2	0	0	2	2	2	1	Glycerophosphoryl	diester	phosphodiesterase	family
DUF976	PF06162.7	gi|15922732|ref|NP_378401.1|	-	0.039	13.4	0.1	0.069	12.6	0.1	1.3	1	0	0	1	1	1	0	Caenorhabditis	elegans	protein	of	unknown	function	(DUF976)
PQQ_2	PF13360.1	gi|15922733|ref|NP_378402.1|	-	4.7e-47	160.4	1.5	1.1e-20	74.1	0.0	2.9	1	1	2	3	3	3	3	PQQ-like	domain
PQQ	PF01011.16	gi|15922733|ref|NP_378402.1|	-	1.1e-26	91.0	6.8	9e-05	21.8	0.1	6.5	6	0	0	6	6	6	5	PQQ	enzyme	repeat
PQQ_3	PF13570.1	gi|15922733|ref|NP_378402.1|	-	5.6e-19	67.7	3.7	0.03	14.6	0.0	7.5	6	2	1	7	7	7	5	PQQ-like	domain
Amidohydro_3	PF07969.6	gi|15922734|ref|NP_378403.1|	-	2.4e-25	89.6	0.0	3.1e-24	85.9	0.0	1.9	1	1	1	2	2	2	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|15922734|ref|NP_378403.1|	-	3.3e-12	47.0	0.0	5.2e-12	46.3	0.0	1.3	1	1	0	1	1	1	1	Amidohydrolase
Amidohydro_5	PF13594.1	gi|15922734|ref|NP_378403.1|	-	2.2e-06	27.3	0.7	5.6e-06	26.0	0.0	2.0	2	0	0	2	2	2	1	Amidohydrolase
Pirin	PF02678.11	gi|15922735|ref|NP_378404.1|	-	9.2e-38	128.4	0.0	1.6e-37	127.6	0.0	1.4	1	0	0	1	1	1	1	Pirin
Pirin_C	PF05726.8	gi|15922735|ref|NP_378404.1|	-	1.2e-27	95.9	0.0	1e-26	93.0	0.0	2.1	2	0	0	2	2	2	1	Pirin	C-terminal	cupin	domain
UDG	PF03167.14	gi|15922736|ref|NP_378405.1|	-	5.1e-33	113.7	0.0	6.6e-33	113.3	0.0	1.1	1	0	0	1	1	1	1	Uracil	DNA	glycosylase	superfamily
MFS_1	PF07690.11	gi|15922738|ref|NP_378407.1|	-	1.2e-21	76.8	49.8	1.4e-18	66.7	27.2	2.3	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
CxxCxxCC	PF03692.10	gi|15922739|ref|NP_378408.1|	-	2.3e-10	40.7	3.7	3.6e-10	40.1	2.6	1.3	1	0	0	1	1	1	1	Putative	zinc-	or	iron-chelating	domain
APP_N	PF02177.11	gi|15922739|ref|NP_378408.1|	-	0.06	13.2	0.3	0.23	11.3	0.0	1.9	2	0	0	2	2	2	0	Amyloid	A4	N-terminal	heparin-binding
MFS_1	PF07690.11	gi|15922740|ref|NP_378409.1|	-	9.3e-23	80.5	53.6	5.3e-14	51.6	21.8	2.2	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
TPP_enzyme_N	PF02776.13	gi|15922741|ref|NP_378410.1|	-	1.5e-44	151.4	0.0	3.1e-44	150.4	0.0	1.5	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|15922741|ref|NP_378410.1|	-	5.3e-16	58.5	0.4	2.3e-15	56.4	0.0	2.2	3	0	0	3	3	3	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.17	gi|15922741|ref|NP_378410.1|	-	1.8e-05	24.5	0.0	0.00055	19.7	0.0	2.4	1	1	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
DXP_synthase_N	PF13292.1	gi|15922741|ref|NP_378410.1|	-	0.068	12.0	0.0	0.14	11.1	0.0	1.5	1	0	0	1	1	1	0	1-deoxy-D-xylulose-5-phosphate	synthase
TPX2	PF06886.6	gi|15922741|ref|NP_378410.1|	-	0.95	9.5	11.5	2.5	8.2	8.0	1.7	1	0	0	1	1	1	0	Targeting	protein	for	Xklp2	(TPX2)
Voltage_CLC	PF00654.15	gi|15922742|ref|NP_378411.1|	-	2.5e-89	299.7	38.2	6.4e-89	298.4	22.9	2.0	2	0	0	2	2	2	2	Voltage	gated	chloride	channel
CBS	PF00571.23	gi|15922742|ref|NP_378411.1|	-	4.6e-17	61.5	0.1	9.9e-09	34.8	0.0	2.5	2	0	0	2	2	2	2	CBS	domain
DUF3463	PF11946.3	gi|15922743|ref|NP_378412.1|	-	1.4e-23	83.0	0.4	2.3e-23	82.3	0.2	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3463)
Radical_SAM	PF04055.16	gi|15922743|ref|NP_378412.1|	-	4.7e-20	72.4	0.2	1.7e-19	70.5	0.0	1.8	1	1	1	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|15922743|ref|NP_378412.1|	-	1.2e-08	35.2	0.2	1.9e-07	31.2	0.0	2.2	1	1	1	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|15922743|ref|NP_378412.1|	-	5.3e-06	26.4	0.0	1.8e-05	24.7	0.0	1.8	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
RBD-FIP	PF09457.5	gi|15922743|ref|NP_378412.1|	-	0.068	12.9	0.2	0.29	10.9	0.1	2.1	1	0	0	1	1	1	0	FIP	domain
3HCDH	PF00725.17	gi|15922744|ref|NP_378413.1|	-	4.2e-05	23.8	0.0	4.3e-05	23.8	0.0	1.0	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
3HCDH_N	PF02737.13	gi|15922745|ref|NP_378414.1|	-	2.2e-63	213.1	0.0	2.7e-63	212.8	0.0	1.1	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
3HCDH	PF00725.17	gi|15922745|ref|NP_378414.1|	-	4.7e-24	84.6	0.0	1.2e-23	83.3	0.0	1.7	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
NAD_binding_2	PF03446.10	gi|15922745|ref|NP_378414.1|	-	8.5e-07	28.9	0.0	1.7e-06	28.0	0.0	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.18	gi|15922745|ref|NP_378414.1|	-	1.4e-06	28.0	0.0	2.9e-06	27.1	0.0	1.5	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
AlaDh_PNT_C	PF01262.16	gi|15922745|ref|NP_378414.1|	-	5.6e-05	22.7	0.0	9.5e-05	22.0	0.0	1.5	1	1	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
F420_oxidored	PF03807.12	gi|15922745|ref|NP_378414.1|	-	0.00049	20.4	0.0	0.001	19.4	0.0	1.6	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
2-Hacid_dh_C	PF02826.14	gi|15922745|ref|NP_378414.1|	-	0.0027	16.8	0.0	0.004	16.3	0.0	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Pyr_redox	PF00070.22	gi|15922745|ref|NP_378414.1|	-	0.0086	16.4	0.0	0.022	15.1	0.0	1.8	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
TrkA_N	PF02254.13	gi|15922745|ref|NP_378414.1|	-	0.036	14.0	0.1	0.24	11.4	0.0	2.3	3	0	0	3	3	3	0	TrkA-N	domain
ApbA	PF02558.11	gi|15922745|ref|NP_378414.1|	-	0.077	12.4	0.0	0.11	11.9	0.0	1.3	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
Pyr_redox_2	PF07992.9	gi|15922745|ref|NP_378414.1|	-	0.079	12.8	0.0	0.11	12.3	0.0	1.3	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
SHOCT	PF09851.4	gi|15922745|ref|NP_378414.1|	-	0.094	12.2	0.3	5.7	6.5	0.0	2.5	2	0	0	2	2	2	0	Short	C-terminal	domain
DAO	PF01266.19	gi|15922745|ref|NP_378414.1|	-	0.11	11.3	0.0	0.16	10.8	0.0	1.2	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
UDPG_MGDP_dh_N	PF03721.9	gi|15922745|ref|NP_378414.1|	-	0.14	11.5	1.4	0.41	10.0	1.0	1.7	1	1	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
AurF	PF11583.3	gi|15922746|ref|NP_378415.1|	-	4.2e-05	22.6	0.0	0.0011	18.0	0.0	2.2	1	1	0	1	1	1	1	P-aminobenzoate	N-oxygenase	AurF
Rubrerythrin	PF02915.12	gi|15922746|ref|NP_378415.1|	-	4.7e-05	23.7	0.1	0.00041	20.6	0.1	2.3	2	0	0	2	2	2	1	Rubrerythrin
FA_desaturase_2	PF03405.9	gi|15922746|ref|NP_378415.1|	-	0.035	12.8	0.1	0.22	10.2	0.0	1.9	2	0	0	2	2	2	0	Fatty	acid	desaturase
Antitoxin-MazE	PF04014.13	gi|15922747|ref|NP_378416.1|	-	3.3e-07	29.8	0.2	7.2e-07	28.7	0.2	1.6	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
IFN-gamma	PF00714.12	gi|15922747|ref|NP_378416.1|	-	0.3	10.9	6.6	1.1	9.0	0.1	3.1	3	0	0	3	3	3	0	Interferon	gamma
PhoU	PF01895.14	gi|15922747|ref|NP_378416.1|	-	7.8	7.0	11.5	0.58	10.6	0.7	3.4	2	2	0	2	2	2	0	PhoU	domain
ECH	PF00378.15	gi|15922748|ref|NP_378417.1|	-	5.2e-76	254.9	0.8	5.9e-76	254.8	0.6	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
DUF2191	PF09957.4	gi|15922748|ref|NP_378417.1|	-	0.0082	15.9	1.3	0.26	11.1	1.3	2.7	2	1	0	2	2	2	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2191)
Peptidase_S49	PF01343.13	gi|15922748|ref|NP_378417.1|	-	0.0099	15.6	0.0	0.045	13.5	0.0	2.0	2	0	0	2	2	2	1	Peptidase	family	S49
ECH_C	PF13766.1	gi|15922748|ref|NP_378417.1|	-	0.051	13.7	0.0	0.097	12.8	0.0	1.4	1	0	0	1	1	1	0	2-enoyl-CoA	Hydratase	C-terminal	region
ECH	PF00378.15	gi|15922749|ref|NP_378418.1|	-	3e-42	144.4	0.0	3.4e-42	144.2	0.0	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
ECH_C	PF13766.1	gi|15922749|ref|NP_378418.1|	-	0.00062	19.9	0.0	0.0017	18.5	0.0	1.7	2	0	0	2	2	2	1	2-enoyl-CoA	Hydratase	C-terminal	region
Smr	PF01713.16	gi|15922749|ref|NP_378418.1|	-	0.12	12.6	0.0	0.32	11.2	0.0	1.7	1	0	0	1	1	1	0	Smr	domain
Thiolase_N	PF00108.18	gi|15922750|ref|NP_378419.1|	-	4e-11	42.3	0.1	8e-10	38.1	0.0	2.1	1	1	1	2	2	2	1	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.13	gi|15922750|ref|NP_378419.1|	-	2.5e-08	33.3	0.5	4.8e-07	29.2	0.1	2.7	2	1	0	2	2	2	1	Thiolase,	C-terminal	domain
ketoacyl-synt	PF00109.21	gi|15922750|ref|NP_378419.1|	-	0.00022	20.8	5.5	0.00077	19.0	1.4	2.5	2	1	1	3	3	3	1	Beta-ketoacyl	synthase,	N-terminal	domain
Ketoacyl-synt_C	PF02801.17	gi|15922750|ref|NP_378419.1|	-	0.0037	17.1	0.4	1.9	8.3	0.0	3.5	4	0	0	4	4	4	1	Beta-ketoacyl	synthase,	C-terminal	domain
ACP_syn_III	PF08545.5	gi|15922750|ref|NP_378419.1|	-	0.028	14.0	0.4	0.065	12.8	0.3	1.6	1	0	0	1	1	1	0	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
DUF35	PF01796.12	gi|15922751|ref|NP_378420.1|	-	5.9e-09	36.0	0.0	8.7e-09	35.4	0.0	1.3	1	0	0	1	1	1	1	DUF35	OB-fold	domain
DUF35_N	PF12172.3	gi|15922751|ref|NP_378420.1|	-	6.2e-09	35.5	0.0	9.6e-09	34.9	0.0	1.2	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF3724	PF12521.3	gi|15922751|ref|NP_378420.1|	-	0.11	12.2	0.1	0.26	11.0	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3724)
AMP-binding	PF00501.23	gi|15922752|ref|NP_378421.1|	-	9e-19	67.1	0.0	1.3e-18	66.6	0.0	1.4	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C_2	PF14535.1	gi|15922752|ref|NP_378421.1|	-	8.9e-15	54.5	0.3	2.7e-14	52.9	0.1	1.9	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
DUF1689	PF07954.6	gi|15922754|ref|NP_378423.1|	-	0.58	9.9	2.9	3	7.7	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1689)
DUF996	PF06195.8	gi|15922754|ref|NP_378423.1|	-	6.2	6.8	28.5	64	3.5	0.1	3.5	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF996)
MFS_1	PF07690.11	gi|15922755|ref|NP_378424.1|	-	1.8e-31	109.1	37.8	1.8e-31	109.1	26.2	1.8	1	1	0	1	1	1	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|15922755|ref|NP_378424.1|	-	1.5e-20	73.2	30.1	3.9e-17	61.9	7.5	2.6	1	1	1	2	2	2	2	Sugar	(and	other)	transporter
DUF791	PF05631.9	gi|15922755|ref|NP_378424.1|	-	2.8e-07	29.5	2.5	5.7e-07	28.5	1.7	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF791)
MFS_2	PF13347.1	gi|15922755|ref|NP_378424.1|	-	0.00023	19.7	23.2	0.0025	16.2	4.6	2.5	2	1	0	2	2	2	2	MFS/sugar	transport	protein
MFS_3	PF05977.8	gi|15922755|ref|NP_378424.1|	-	2.4	6.1	13.5	1.1	7.2	0.5	2.9	2	1	1	3	3	3	0	Transmembrane	secretion	effector
Nol1_Nop2_Fmu	PF01189.12	gi|15922756|ref|NP_378425.1|	-	1.1e-33	116.8	0.1	4.3e-33	114.9	0.0	1.7	1	1	0	1	1	1	1	NOL1/NOP2/sun	family
DUF3920	PF13058.1	gi|15922756|ref|NP_378425.1|	-	0.0027	17.5	0.1	0.007	16.1	0.1	1.8	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3920)
TEX12	PF15219.1	gi|15922757|ref|NP_378426.1|	-	0.094	12.7	0.0	0.14	12.1	0.0	1.5	1	0	0	1	1	1	0	Testis-expressed	12
HEPN	PF05168.9	gi|15922757|ref|NP_378426.1|	-	0.11	12.4	1.6	2.1	8.2	0.1	2.1	1	1	1	2	2	2	0	HEPN	domain
RmlD_sub_bind	PF04321.12	gi|15922758|ref|NP_378427.1|	-	2.5e-23	82.3	0.0	3.1e-23	82.0	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Epimerase	PF01370.16	gi|15922758|ref|NP_378427.1|	-	2.2e-07	30.5	0.0	2.8e-07	30.2	0.0	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
Sugar_tr	PF00083.19	gi|15922761|ref|NP_378430.1|	-	9e-55	186.0	21.0	1.1e-54	185.6	14.6	1.0	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|15922761|ref|NP_378430.1|	-	1.2e-21	76.8	31.4	1.2e-21	76.8	21.8	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Orai-1	PF07856.7	gi|15922761|ref|NP_378430.1|	-	0.054	13.0	0.2	0.12	11.9	0.2	1.6	1	0	0	1	1	1	0	Mediator	of	CRAC	channel	activity
PaREP1	PF05942.6	gi|15922762|ref|NP_378431.1|	-	9.5e-20	70.5	3.5	1.2e-19	70.2	2.4	1.2	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
Med29	PF11568.3	gi|15922762|ref|NP_378431.1|	-	0.027	14.5	0.3	2.4	8.2	0.1	2.1	2	0	0	2	2	2	0	Mediator	complex	subunit	29
HEPN	PF05168.9	gi|15922762|ref|NP_378431.1|	-	0.029	14.2	1.8	0.069	13.0	1.2	1.7	1	1	0	1	1	1	0	HEPN	domain
DUF1926	PF09095.6	gi|15922762|ref|NP_378431.1|	-	0.035	13.3	0.5	0.04	13.1	0.4	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1926)
Condensin2nSMC	PF12422.3	gi|15922762|ref|NP_378431.1|	-	0.088	12.5	0.1	0.12	12.1	0.1	1.2	1	0	0	1	1	1	0	Condensin	II	non	structural	maintenance	of	chromosomes	subunit
DUF2604	PF10790.4	gi|15922762|ref|NP_378431.1|	-	0.12	12.5	0.0	0.17	12.0	0.0	1.3	1	0	0	1	1	1	0	Protein	of	Unknown	function	(DUF2604)
TPR_11	PF13414.1	gi|15922762|ref|NP_378431.1|	-	0.2	11.3	1.8	0.39	10.3	0.8	2.1	2	1	0	2	2	2	0	TPR	repeat
DUF357	PF04010.8	gi|15922762|ref|NP_378431.1|	-	0.3	10.8	5.7	6.7	6.4	0.0	3.0	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF357)
Transposase_20	PF02371.11	gi|15922763|ref|NP_378432.1|	-	7.7e-25	86.8	0.0	1.2e-24	86.2	0.0	1.3	1	0	0	1	1	1	1	Transposase	IS116/IS110/IS902	family
DEDD_Tnp_IS110	PF01548.12	gi|15922763|ref|NP_378432.1|	-	1.8e-10	40.6	0.0	4.5e-10	39.3	0.0	1.8	1	0	0	1	1	1	1	Transposase
DUF445	PF04286.7	gi|15922763|ref|NP_378432.1|	-	0.0033	17.0	0.3	0.0047	16.5	0.2	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF445)
Gag_spuma	PF03276.9	gi|15922763|ref|NP_378432.1|	-	0.22	9.8	0.0	0.3	9.3	0.0	1.1	1	0	0	1	1	1	0	Spumavirus	gag	protein
OrfB_Zn_ribbon	PF07282.6	gi|15922764|ref|NP_378433.1|	-	4e-21	74.4	1.8	1.6e-20	72.4	0.2	2.3	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|15922764|ref|NP_378433.1|	-	2.5e-05	23.7	0.4	4.9e-05	22.8	0.3	1.6	1	0	0	1	1	1	1	Probable	transposase
PLU-1	PF08429.6	gi|15922764|ref|NP_378433.1|	-	0.014	14.3	0.1	0.019	13.8	0.1	1.2	1	0	0	1	1	1	0	PLU-1-like	protein
LytTR	PF04397.10	gi|15922764|ref|NP_378433.1|	-	0.028	14.5	0.7	0.068	13.2	0.2	1.9	2	0	0	2	2	2	0	LytTr	DNA-binding	domain
TPP_enzyme_C	PF02775.16	gi|15922765|ref|NP_378434.1|	-	9.8e-31	106.3	0.3	1.7e-30	105.6	0.1	1.5	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
PFO_beta_C	PF12367.3	gi|15922765|ref|NP_378434.1|	-	3.4e-15	55.7	0.4	1.2e-14	53.9	0.3	1.8	1	1	0	1	1	1	1	Pyruvate	ferredoxin	oxidoreductase	beta	subunit	C	terminal
PIN_2	PF10130.4	gi|15922766|ref|NP_378435.1|	-	0.1	12.6	0.0	0.13	12.2	0.0	1.1	1	0	0	1	1	1	0	PIN	domain
POR_N	PF01855.14	gi|15922767|ref|NP_378436.1|	-	5.2e-59	199.5	0.0	8.4e-59	198.8	0.0	1.3	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
POR	PF01558.13	gi|15922767|ref|NP_378436.1|	-	9.2e-37	126.5	0.6	2.7e-36	125.0	0.2	1.9	2	0	0	2	2	2	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
Transketolase_C	PF02780.15	gi|15922767|ref|NP_378436.1|	-	1.9e-06	27.7	0.0	7.6e-06	25.8	0.0	2.0	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
TPP_enzyme_N	PF02776.13	gi|15922767|ref|NP_378436.1|	-	3.7e-05	23.2	0.6	0.0013	18.2	0.3	2.8	3	0	0	3	3	3	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
Nitro_FeMo-Co	PF02579.12	gi|15922767|ref|NP_378436.1|	-	0.0081	16.2	0.0	0.032	14.2	0.0	2.1	1	0	0	1	1	1	1	Dinitrogenase	iron-molybdenum	cofactor
Glyco_hydro_97	PF10566.4	gi|15922767|ref|NP_378436.1|	-	0.02	13.9	0.1	0.033	13.3	0.0	1.3	1	0	0	1	1	1	0	Glycoside	hydrolase	97
HTH_32	PF13565.1	gi|15922767|ref|NP_378436.1|	-	0.16	12.7	0.0	11	6.8	0.0	2.5	2	0	0	2	2	2	0	Homeodomain-like	domain
ABC_tran	PF00005.22	gi|15922769|ref|NP_378438.1|	-	6.2e-32	110.7	0.2	5.8e-31	107.6	0.0	1.9	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|15922769|ref|NP_378438.1|	-	7.5e-14	52.3	1.4	9.9e-07	28.9	0.0	2.5	2	1	1	3	3	2	2	AAA	domain
AAA_29	PF13555.1	gi|15922769|ref|NP_378438.1|	-	3.1e-05	23.4	0.1	5.8e-05	22.5	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
MMR_HSR1	PF01926.18	gi|15922769|ref|NP_378438.1|	-	4.7e-05	23.3	0.1	0.00019	21.3	0.0	2.2	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
AAA_16	PF13191.1	gi|15922769|ref|NP_378438.1|	-	0.00057	19.9	0.0	0.0012	18.8	0.0	1.5	1	0	0	1	1	1	1	AAA	ATPase	domain
SMC_N	PF02463.14	gi|15922769|ref|NP_378438.1|	-	0.0009	18.5	0.3	0.029	13.5	0.0	2.5	2	1	1	3	3	3	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|15922769|ref|NP_378438.1|	-	0.001	18.2	2.0	0.048	12.6	0.0	2.7	2	1	1	3	3	3	1	AAA	ATPase	domain
NACHT	PF05729.7	gi|15922769|ref|NP_378438.1|	-	0.0015	18.2	0.0	0.029	14.0	0.0	2.3	2	0	0	2	2	2	1	NACHT	domain
AAA_23	PF13476.1	gi|15922769|ref|NP_378438.1|	-	0.002	18.4	2.6	0.0058	16.9	1.8	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|15922769|ref|NP_378438.1|	-	0.0028	17.8	0.0	0.0072	16.4	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
UPF0079	PF02367.12	gi|15922769|ref|NP_378438.1|	-	0.0031	17.1	0.0	0.0074	15.9	0.0	1.6	1	0	0	1	1	1	1	Uncharacterised	P-loop	hydrolase	UPF0079
MobB	PF03205.9	gi|15922769|ref|NP_378438.1|	-	0.0034	17.1	0.6	0.012	15.2	0.0	2.2	2	1	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_33	PF13671.1	gi|15922769|ref|NP_378438.1|	-	0.0036	17.1	0.0	0.044	13.6	0.0	2.3	2	1	0	2	2	2	1	AAA	domain
AAA_10	PF12846.2	gi|15922769|ref|NP_378438.1|	-	0.0052	16.2	0.1	0.85	9.0	0.0	2.3	2	1	0	2	2	2	1	AAA-like	domain
SRP54	PF00448.17	gi|15922769|ref|NP_378438.1|	-	0.0071	15.8	0.0	0.014	14.8	0.0	1.5	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
NTPase_1	PF03266.10	gi|15922769|ref|NP_378438.1|	-	0.0072	16.0	6.7	0.42	10.2	0.0	3.3	2	1	1	3	3	3	1	NTPase
AAA_5	PF07728.9	gi|15922769|ref|NP_378438.1|	-	0.0073	16.0	0.1	0.11	12.1	0.0	2.5	2	1	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA	PF00004.24	gi|15922769|ref|NP_378438.1|	-	0.0075	16.4	0.7	0.039	14.1	0.5	2.4	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF258	PF03193.11	gi|15922769|ref|NP_378438.1|	-	0.019	14.1	0.0	0.044	12.9	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_19	PF13245.1	gi|15922769|ref|NP_378438.1|	-	0.022	14.5	0.0	0.2	11.4	0.0	2.3	2	0	0	2	2	2	0	Part	of	AAA	domain
cobW	PF02492.14	gi|15922769|ref|NP_378438.1|	-	0.026	13.9	0.1	0.057	12.8	0.0	1.5	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_30	PF13604.1	gi|15922769|ref|NP_378438.1|	-	0.038	13.5	0.0	0.1	12.1	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
Miro	PF08477.8	gi|15922769|ref|NP_378438.1|	-	0.049	14.1	0.0	0.13	12.7	0.0	1.8	1	0	0	1	1	1	0	Miro-like	protein
AAA_14	PF13173.1	gi|15922769|ref|NP_378438.1|	-	0.05	13.5	1.6	0.95	9.3	0.0	2.9	1	1	1	3	3	3	0	AAA	domain
NB-ARC	PF00931.17	gi|15922769|ref|NP_378438.1|	-	0.055	12.3	0.3	0.12	11.1	0.0	1.7	2	1	0	2	2	2	0	NB-ARC	domain
Zeta_toxin	PF06414.7	gi|15922769|ref|NP_378438.1|	-	0.055	12.5	0.0	0.13	11.3	0.0	1.6	1	0	0	1	1	1	0	Zeta	toxin
T2SE	PF00437.15	gi|15922769|ref|NP_378438.1|	-	0.082	11.7	0.0	0.16	10.7	0.0	1.5	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
ATP_bind_1	PF03029.12	gi|15922769|ref|NP_378438.1|	-	0.092	12.2	0.0	0.24	10.9	0.0	1.7	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
AAA_25	PF13481.1	gi|15922769|ref|NP_378438.1|	-	0.11	11.9	0.0	0.28	10.5	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
AAA_18	PF13238.1	gi|15922769|ref|NP_378438.1|	-	2.2	8.5	4.7	80	3.5	3.2	2.7	1	1	0	1	1	1	0	AAA	domain
ABC2_membrane_4	PF12730.2	gi|15922770|ref|NP_378439.1|	-	7.2e-11	41.6	37.7	1.6e-10	40.5	24.2	2.0	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.2	gi|15922770|ref|NP_378439.1|	-	3.2e-08	32.7	30.1	8.6e-08	31.3	20.8	1.7	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
CbiA	PF01656.18	gi|15922771|ref|NP_378440.1|	-	1.1e-10	41.2	0.0	1.7e-10	40.6	0.0	1.3	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.1	gi|15922771|ref|NP_378440.1|	-	2.1e-07	31.0	0.1	7e-05	22.8	0.1	2.3	1	1	0	1	1	1	1	AAA	domain
AAA_25	PF13481.1	gi|15922771|ref|NP_378440.1|	-	0.0024	17.3	0.0	0.0095	15.3	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
ArsA_ATPase	PF02374.10	gi|15922771|ref|NP_378440.1|	-	0.0029	16.6	1.0	0.17	10.9	0.0	2.5	2	1	1	3	3	3	1	Anion-transporting	ATPase
AAA_17	PF13207.1	gi|15922771|ref|NP_378440.1|	-	0.02	15.7	0.0	0.037	14.8	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
ResIII	PF04851.10	gi|15922771|ref|NP_378440.1|	-	0.029	14.2	0.1	0.05	13.4	0.0	1.5	1	1	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
SH3_7	PF12914.2	gi|15922771|ref|NP_378440.1|	-	0.037	13.7	0.0	0.1	12.3	0.0	1.7	1	0	0	1	1	1	0	SH3	domain	of	SH3b2	type
AAA_18	PF13238.1	gi|15922771|ref|NP_378440.1|	-	0.046	14.0	0.1	0.15	12.3	0.0	1.8	2	1	0	2	2	2	0	AAA	domain
MipZ	PF09140.6	gi|15922771|ref|NP_378440.1|	-	0.081	11.9	0.0	0.16	10.9	0.0	1.5	1	1	0	1	1	1	0	ATPase	MipZ
AAA_14	PF13173.1	gi|15922771|ref|NP_378440.1|	-	0.17	11.7	1.0	0.37	10.7	0.1	2.0	2	1	0	2	2	2	0	AAA	domain
Pkinase	PF00069.20	gi|15922772|ref|NP_378441.1|	-	1.7e-21	76.5	0.0	6.8e-21	74.5	0.0	1.8	2	0	0	2	2	2	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|15922772|ref|NP_378441.1|	-	6.4e-08	31.9	0.0	2.9e-07	29.8	0.0	2.1	2	1	0	2	2	2	1	Protein	tyrosine	kinase
DUF1955	PF09205.5	gi|15922772|ref|NP_378441.1|	-	0.0011	18.5	4.7	0.0071	15.8	3.3	2.1	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF1955)
Per1	PF04080.8	gi|15922772|ref|NP_378441.1|	-	0.022	14.1	1.8	0.036	13.4	1.2	1.3	1	0	0	1	1	1	0	Per1-like
Amidinotransf	PF02274.12	gi|15922773|ref|NP_378442.1|	-	2e-48	164.9	0.0	2.5e-48	164.5	0.0	1.1	1	0	0	1	1	1	1	Amidinotransferase
AAA_28	PF13521.1	gi|15922773|ref|NP_378442.1|	-	0.11	12.4	0.2	8.1	6.3	0.0	2.5	3	0	0	3	3	3	0	AAA	domain
PAD_porph	PF04371.10	gi|15922773|ref|NP_378442.1|	-	0.14	11.1	0.0	0.34	9.9	0.0	1.7	1	1	0	1	1	1	0	Porphyromonas-type	peptidyl-arginine	deiminase
AhpC-TSA	PF00578.16	gi|15922774|ref|NP_378443.1|	-	5.3e-35	119.7	0.1	9.8e-35	118.9	0.0	1.4	2	0	0	2	2	2	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|15922774|ref|NP_378443.1|	-	1.4e-16	60.3	0.0	2.3e-16	59.6	0.0	1.3	1	0	0	1	1	1	1	Redoxin
1-cysPrx_C	PF10417.4	gi|15922774|ref|NP_378443.1|	-	1.6e-12	46.8	0.1	3e-12	45.9	0.0	1.4	1	0	0	1	1	1	1	C-terminal	domain	of	1-Cys	peroxiredoxin
RE_ApaLI	PF09499.5	gi|15922774|ref|NP_378443.1|	-	0.1	11.9	0.0	0.19	11.0	0.0	1.4	1	1	0	1	1	1	0	ApaLI-like	restriction	endonuclease
NicO	PF03824.11	gi|15922775|ref|NP_378444.1|	-	1.3e-86	290.4	12.7	1.3e-86	290.4	8.8	1.3	2	0	0	2	2	2	1	High-affinity	nickel-transport	protein
ABC2_membrane	PF01061.19	gi|15922777|ref|NP_378446.1|	-	9.2e-08	31.5	26.9	9.2e-08	31.5	18.6	1.8	1	1	0	1	1	1	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.2	gi|15922777|ref|NP_378446.1|	-	5.9	5.8	43.4	0.22	10.5	25.9	1.5	1	1	1	2	2	2	0	ABC-2	family	transporter	protein
ABC_tran	PF00005.22	gi|15922778|ref|NP_378447.1|	-	1.6e-24	86.7	0.0	2.7e-24	86.0	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|15922778|ref|NP_378447.1|	-	1.8e-13	51.1	0.1	6.4e-09	36.1	0.0	2.5	3	0	0	3	3	3	2	AAA	domain
AAA_13	PF13166.1	gi|15922778|ref|NP_378447.1|	-	0.0013	17.3	0.0	0.0086	14.6	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
AAA_15	PF13175.1	gi|15922778|ref|NP_378447.1|	-	0.0018	17.3	0.4	0.78	8.7	0.1	2.1	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_18	PF13238.1	gi|15922778|ref|NP_378447.1|	-	0.003	17.8	0.3	0.011	16.0	0.0	1.9	2	1	0	2	2	2	1	AAA	domain
AAA_29	PF13555.1	gi|15922778|ref|NP_378447.1|	-	0.0031	16.9	0.1	0.0055	16.2	0.1	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
SMC_N	PF02463.14	gi|15922778|ref|NP_378447.1|	-	0.0045	16.2	0.1	0.84	8.8	0.0	2.2	1	1	1	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
UPF0079	PF02367.12	gi|15922778|ref|NP_378447.1|	-	0.0082	15.7	0.1	0.016	14.8	0.0	1.4	1	0	0	1	1	1	1	Uncharacterised	P-loop	hydrolase	UPF0079
PduV-EutP	PF10662.4	gi|15922778|ref|NP_378447.1|	-	0.014	14.8	0.1	0.03	13.8	0.1	1.5	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
SbcCD_C	PF13558.1	gi|15922778|ref|NP_378447.1|	-	0.022	14.6	0.0	0.27	11.1	0.0	2.2	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
NB-ARC	PF00931.17	gi|15922778|ref|NP_378447.1|	-	0.023	13.5	0.1	0.043	12.6	0.1	1.6	1	1	0	1	1	1	0	NB-ARC	domain
AAA	PF00004.24	gi|15922778|ref|NP_378447.1|	-	0.056	13.6	0.7	0.33	11.1	0.5	2.2	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF258	PF03193.11	gi|15922778|ref|NP_378447.1|	-	0.057	12.6	0.0	0.092	11.9	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_22	PF13401.1	gi|15922778|ref|NP_378447.1|	-	0.058	13.5	0.1	0.15	12.2	0.1	1.8	1	1	0	1	1	1	0	AAA	domain
AAA_17	PF13207.1	gi|15922778|ref|NP_378447.1|	-	0.11	13.3	0.4	0.35	11.6	0.3	2.2	1	1	0	1	1	1	0	AAA	domain
AAA_14	PF13173.1	gi|15922778|ref|NP_378447.1|	-	0.12	12.3	0.1	3.4	7.5	0.0	2.6	2	1	0	2	2	2	0	AAA	domain
AAA_28	PF13521.1	gi|15922778|ref|NP_378447.1|	-	0.14	12.1	0.1	0.58	10.1	0.1	1.9	2	0	0	2	2	2	0	AAA	domain
AAA_23	PF13476.1	gi|15922778|ref|NP_378447.1|	-	0.19	12.0	0.7	0.28	11.4	0.5	1.7	1	1	0	1	1	1	0	AAA	domain
UPF0066	PF01980.11	gi|15922779|ref|NP_378448.1|	-	8e-36	122.6	0.0	1e-35	122.2	0.0	1.1	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0066
Integrin_beta	PF00362.13	gi|15922780|ref|NP_378449.1|	-	0.056	12.3	0.2	0.075	11.9	0.1	1.2	1	0	0	1	1	1	0	Integrin,	beta	chain
PNP_UDP_1	PF01048.15	gi|15922781|ref|NP_378450.1|	-	2.6e-23	82.2	0.0	3.3e-23	81.8	0.0	1.1	1	0	0	1	1	1	1	Phosphorylase	superfamily
TnpW	PF14202.1	gi|15922784|ref|NP_378453.1|	-	0.066	12.8	0.2	0.12	11.9	0.1	1.4	1	0	0	1	1	1	0	Transposon-encoded	protein	TnpW
DUF3792	PF12670.2	gi|15922784|ref|NP_378453.1|	-	3	7.7	18.0	0.12	12.2	6.6	2.6	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3792)
TrkA_N	PF02254.13	gi|15922785|ref|NP_378454.1|	-	1.8e-16	60.2	0.4	2.7e-16	59.6	0.3	1.3	1	0	0	1	1	1	1	TrkA-N	domain
TrkA_C	PF02080.16	gi|15922785|ref|NP_378454.1|	-	0.00014	21.3	0.0	0.0023	17.4	0.0	2.5	2	1	0	2	2	2	1	TrkA-C	domain
Ion_trans_2	PF07885.11	gi|15922785|ref|NP_378454.1|	-	0.00084	19.0	8.3	0.0017	18.0	5.8	1.5	1	0	0	1	1	1	1	Ion	channel
Oxidored_nitro	PF00148.14	gi|15922785|ref|NP_378454.1|	-	0.15	10.6	0.0	0.2	10.2	0.0	1.2	1	0	0	1	1	1	0	Nitrogenase	component	1	type	Oxidoreductase
Sugar_tr	PF00083.19	gi|15922786|ref|NP_378455.1|	-	3.5e-39	134.6	28.8	4.2e-39	134.3	20.0	1.1	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|15922786|ref|NP_378455.1|	-	5.2e-35	120.7	34.0	5.2e-35	120.7	23.5	2.1	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
DUF1228	PF06779.9	gi|15922786|ref|NP_378455.1|	-	0.0089	16.0	0.3	0.0089	16.0	0.2	3.3	3	1	1	4	4	4	1	Protein	of	unknown	function	(DUF1228)
AA_permease	PF00324.16	gi|15922787|ref|NP_378456.1|	-	3.2e-12	45.5	42.9	3.2e-12	45.5	29.8	2.0	1	1	1	2	2	2	1	Amino	acid	permease
AA_permease_2	PF13520.1	gi|15922787|ref|NP_378456.1|	-	1.6e-07	30.2	62.5	1.2e-06	27.3	43.3	2.0	1	1	0	1	1	1	1	Amino	acid	permease
DivIC	PF04977.10	gi|15922788|ref|NP_378457.1|	-	0.00048	19.5	4.5	0.0046	16.4	1.3	2.0	1	1	1	2	2	2	1	Septum	formation	initiator
Takusan	PF04822.8	gi|15922788|ref|NP_378457.1|	-	0.00078	19.1	1.1	0.00084	19.0	0.8	1.1	1	0	0	1	1	1	1	Takusan
Seryl_tRNA_N	PF02403.17	gi|15922788|ref|NP_378457.1|	-	0.0027	17.7	3.3	0.0049	16.8	2.3	1.4	1	1	0	1	1	1	1	Seryl-tRNA	synthetase	N-terminal	domain
DUF948	PF06103.6	gi|15922788|ref|NP_378457.1|	-	0.0029	17.4	2.7	0.0034	17.2	1.9	1.1	1	0	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF948)
DUF904	PF06005.7	gi|15922788|ref|NP_378457.1|	-	0.0029	17.8	0.9	1.3	9.4	0.0	2.1	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF904)
Prefoldin	PF02996.12	gi|15922788|ref|NP_378457.1|	-	0.0041	16.7	3.5	0.19	11.3	0.2	2.0	1	1	1	2	2	2	1	Prefoldin	subunit
IncA	PF04156.9	gi|15922788|ref|NP_378457.1|	-	0.0046	16.5	2.2	0.0048	16.5	1.5	1.0	1	0	0	1	1	1	1	IncA	protein
Mer2	PF09074.5	gi|15922788|ref|NP_378457.1|	-	0.0073	16.2	2.5	0.0079	16.1	1.7	1.1	1	0	0	1	1	1	1	Mer2
Baculo_PEP_C	PF04513.7	gi|15922788|ref|NP_378457.1|	-	0.0077	16.0	1.1	0.0087	15.8	0.8	1.1	1	0	0	1	1	1	1	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
DUF883	PF05957.8	gi|15922788|ref|NP_378457.1|	-	0.0086	16.4	0.3	0.01	16.1	0.2	1.1	1	0	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF883)
Cep57_MT_bd	PF06657.8	gi|15922788|ref|NP_378457.1|	-	0.0093	15.8	2.2	0.013	15.3	1.3	1.4	1	1	0	1	1	1	1	Centrosome	microtubule-binding	domain	of	Cep57
DUF3375	PF11855.3	gi|15922788|ref|NP_378457.1|	-	0.011	14.5	4.5	0.012	14.4	3.1	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3375)
YtxH	PF12732.2	gi|15922788|ref|NP_378457.1|	-	0.013	15.8	1.9	0.027	14.8	0.4	1.8	1	1	1	2	2	2	0	YtxH-like	protein
FlaC_arch	PF05377.6	gi|15922788|ref|NP_378457.1|	-	0.015	15.2	5.2	0.1	12.4	0.6	2.1	1	1	1	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
DUF2779	PF11074.3	gi|15922788|ref|NP_378457.1|	-	0.015	15.3	5.0	0.49	10.4	0.4	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function(DUF2779)
HalX	PF08663.5	gi|15922788|ref|NP_378457.1|	-	0.016	15.1	2.9	0.016	15.1	2.0	2.0	1	1	1	2	2	2	0	HalX	domain
Bacillus_HBL	PF05791.6	gi|15922788|ref|NP_378457.1|	-	0.018	14.3	2.7	0.062	12.6	1.9	1.7	1	1	0	1	1	1	0	Bacillus	haemolytic	enterotoxin	(HBL)
AKNA	PF12443.3	gi|15922788|ref|NP_378457.1|	-	0.021	14.8	0.9	0.069	13.1	0.3	1.8	1	1	0	1	1	1	0	AT-hook-containing	transcription	factor
LXG	PF04740.7	gi|15922788|ref|NP_378457.1|	-	0.022	14.5	4.9	0.062	13.0	2.6	1.8	1	1	1	2	2	2	0	LXG	domain	of	WXG	superfamily
TBPIP	PF07106.8	gi|15922788|ref|NP_378457.1|	-	0.033	13.7	3.3	0.045	13.3	2.3	1.3	1	0	0	1	1	1	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
FlxA	PF14282.1	gi|15922788|ref|NP_378457.1|	-	0.034	14.1	2.6	0.036	13.9	1.8	1.1	1	0	0	1	1	1	0	FlxA-like	protein
Syntaxin-6_N	PF09177.6	gi|15922788|ref|NP_378457.1|	-	0.034	14.5	5.0	1	9.7	2.8	2.0	1	1	1	2	2	2	0	Syntaxin	6,	N-terminal
DUF632	PF04782.7	gi|15922788|ref|NP_378457.1|	-	0.043	12.8	1.1	0.046	12.8	0.8	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF632)
Imm16	PF15565.1	gi|15922788|ref|NP_378457.1|	-	0.047	13.5	2.0	0.049	13.4	1.4	1.1	1	0	0	1	1	1	0	Immunity	protein	16
DUF972	PF06156.8	gi|15922788|ref|NP_378457.1|	-	0.048	14.0	1.2	0.23	11.8	0.9	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF972)
GAS	PF13851.1	gi|15922788|ref|NP_378457.1|	-	0.052	12.7	0.6	0.059	12.5	0.4	1.2	1	0	0	1	1	1	0	Growth-arrest	specific	micro-tubule	binding
HR1	PF02185.11	gi|15922788|ref|NP_378457.1|	-	0.053	13.2	3.0	0.61	9.8	0.5	2.1	1	1	1	2	2	2	0	Hr1	repeat
CorA	PF01544.13	gi|15922788|ref|NP_378457.1|	-	0.053	12.5	3.8	0.065	12.2	2.7	1.2	1	0	0	1	1	1	0	CorA-like	Mg2+	transporter	protein
EzrA	PF06160.7	gi|15922788|ref|NP_378457.1|	-	0.057	11.5	1.6	0.061	11.4	1.1	1.1	1	0	0	1	1	1	0	Septation	ring	formation	regulator,	EzrA
Mnd1	PF03962.10	gi|15922788|ref|NP_378457.1|	-	0.071	12.7	0.2	0.082	12.5	0.2	1.2	1	0	0	1	1	1	0	Mnd1	family
Herpes_BBRF1	PF04793.7	gi|15922788|ref|NP_378457.1|	-	0.075	11.7	0.5	0.086	11.5	0.3	1.0	1	0	0	1	1	1	0	BRRF1-like	protein
ORF6C	PF10552.4	gi|15922788|ref|NP_378457.1|	-	0.076	12.7	0.3	0.094	12.4	0.2	1.2	1	0	0	1	1	1	0	ORF6C	domain
TMF_DNA_bd	PF12329.3	gi|15922788|ref|NP_378457.1|	-	0.076	12.8	2.4	1	9.2	1.7	2.1	1	1	0	1	1	1	0	TATA	element	modulatory	factor	1	DNA	binding
ParB	PF08775.5	gi|15922788|ref|NP_378457.1|	-	0.081	13.2	3.3	0.087	13.1	2.3	1.0	1	0	0	1	1	1	0	ParB	family
Prefoldin_2	PF01920.15	gi|15922788|ref|NP_378457.1|	-	0.085	12.6	2.8	0.58	9.9	1.0	2.0	1	1	1	2	2	2	0	Prefoldin	subunit
Myosin_tail_1	PF01576.14	gi|15922788|ref|NP_378457.1|	-	0.094	10.4	3.6	0.1	10.2	2.5	1.1	1	0	0	1	1	1	0	Myosin	tail
Spc7	PF08317.6	gi|15922788|ref|NP_378457.1|	-	0.094	11.3	2.7	0.12	10.9	1.9	1.3	1	1	0	1	1	1	0	Spc7	kinetochore	protein
bZIP_1	PF00170.16	gi|15922788|ref|NP_378457.1|	-	0.098	12.6	0.2	0.21	11.5	0.1	1.7	1	1	0	1	1	1	0	bZIP	transcription	factor
Allexi_40kDa	PF05549.6	gi|15922788|ref|NP_378457.1|	-	0.098	11.9	1.7	0.11	11.8	1.2	1.0	1	0	0	1	1	1	0	Allexivirus	40kDa	protein
Ribosomal_L29	PF00831.18	gi|15922788|ref|NP_378457.1|	-	0.1	12.3	3.7	1.1	9.0	0.1	2.4	2	1	0	2	2	2	0	Ribosomal	L29	protein
MCPsignal	PF00015.16	gi|15922788|ref|NP_378457.1|	-	0.1	12.1	0.2	0.13	11.7	0.2	1.2	1	0	0	1	1	1	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
CENP-F_leu_zip	PF10473.4	gi|15922788|ref|NP_378457.1|	-	0.1	12.4	1.4	0.14	11.9	0.9	1.3	1	1	0	1	1	1	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Fib_alpha	PF08702.5	gi|15922788|ref|NP_378457.1|	-	0.12	12.4	2.0	2.5	8.2	0.1	2.0	1	1	1	2	2	2	0	Fibrinogen	alpha/beta	chain	family
TelA	PF05816.6	gi|15922788|ref|NP_378457.1|	-	0.12	11.0	3.3	0.14	10.8	2.3	1.0	1	0	0	1	1	1	0	Toxic	anion	resistance	protein	(TelA)
Laminin_II	PF06009.7	gi|15922788|ref|NP_378457.1|	-	0.12	12.0	1.6	0.15	11.7	1.1	1.1	1	0	0	1	1	1	0	Laminin	Domain	II
Syntaxin	PF00804.20	gi|15922788|ref|NP_378457.1|	-	0.14	12.3	5.1	0.19	11.9	3.5	1.2	1	0	0	1	1	1	0	Syntaxin
DUF677	PF05055.7	gi|15922788|ref|NP_378457.1|	-	0.15	10.7	3.5	0.15	10.6	2.4	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF677)
AAA_13	PF13166.1	gi|15922788|ref|NP_378457.1|	-	0.15	10.4	2.3	0.15	10.4	1.6	1.0	1	0	0	1	1	1	0	AAA	domain
YvrJ	PF12841.2	gi|15922788|ref|NP_378457.1|	-	0.18	11.1	4.5	1.1	8.6	0.2	3.0	1	1	2	3	3	3	0	YvrJ	protein	family
DUF3818	PF12825.2	gi|15922788|ref|NP_378457.1|	-	0.19	10.3	1.7	0.21	10.2	1.2	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	in	PX-proteins	(DUF3818)
HN	PF00423.14	gi|15922788|ref|NP_378457.1|	-	0.19	9.9	3.2	0.24	9.6	2.2	1.0	1	0	0	1	1	1	0	Haemagglutinin-neuraminidase
TSC22	PF01166.13	gi|15922788|ref|NP_378457.1|	-	0.2	11.6	3.8	3.1	7.8	0.1	2.7	1	1	1	2	2	2	0	TSC-22/dip/bun	family
NPV_P10	PF05531.7	gi|15922788|ref|NP_378457.1|	-	0.21	11.8	6.6	0.27	11.4	4.6	1.2	1	0	0	1	1	1	0	Nucleopolyhedrovirus	P10	protein
DUF2130	PF09903.4	gi|15922788|ref|NP_378457.1|	-	0.22	10.2	2.6	0.28	9.9	1.8	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2130)
Reo_sigmaC	PF04582.7	gi|15922788|ref|NP_378457.1|	-	0.22	10.6	1.5	0.26	10.4	1.0	1.2	1	0	0	1	1	1	0	Reovirus	sigma	C	capsid	protein
DUF342	PF03961.8	gi|15922788|ref|NP_378457.1|	-	0.23	9.8	2.0	0.25	9.7	1.4	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
KAR9	PF08580.5	gi|15922788|ref|NP_378457.1|	-	0.24	9.6	7.3	0.27	9.4	5.1	1.0	1	0	0	1	1	1	0	Yeast	cortical	protein	KAR9
DUF848	PF05852.6	gi|15922788|ref|NP_378457.1|	-	0.27	11.0	3.7	0.33	10.8	2.6	1.2	1	0	0	1	1	1	0	Gammaherpesvirus	protein	of	unknown	function	(DUF848)
HSCB_C	PF07743.8	gi|15922788|ref|NP_378457.1|	-	0.28	11.6	3.2	0.82	10.1	2.3	1.8	1	1	0	1	1	1	0	HSCB	C-terminal	oligomerisation	domain
Ferritin	PF00210.19	gi|15922788|ref|NP_378457.1|	-	0.32	10.7	2.4	0.38	10.4	1.6	1.0	1	0	0	1	1	1	0	Ferritin-like	domain
RRF	PF01765.14	gi|15922788|ref|NP_378457.1|	-	0.35	10.3	4.0	0.4	10.1	2.8	1.1	1	0	0	1	1	1	0	Ribosome	recycling	factor
Halo_GVPC	PF05465.8	gi|15922788|ref|NP_378457.1|	-	0.39	10.6	3.9	3	7.8	0.1	2.8	2	1	1	3	3	3	0	Halobacterial	gas	vesicle	protein	C	(GVPC)	repeat
Pox_A_type_inc	PF04508.7	gi|15922788|ref|NP_378457.1|	-	0.4	10.5	11.6	1.1	9.2	0.5	3.9	3	1	1	4	4	4	0	Viral	A-type	inclusion	protein	repeat
Corona_S2	PF01601.11	gi|15922788|ref|NP_378457.1|	-	0.4	8.7	2.4	0.77	7.7	0.4	1.3	1	1	0	1	1	1	0	Coronavirus	S2	glycoprotein
HeLo	PF14479.1	gi|15922788|ref|NP_378457.1|	-	0.46	10.2	4.4	0.63	9.7	3.1	1.3	1	1	0	1	1	1	0	Prion-inhibition	and	propagation
Cauli_AT	PF03233.8	gi|15922788|ref|NP_378457.1|	-	0.54	9.9	4.5	0.6	9.7	3.1	1.0	1	0	0	1	1	1	0	Aphid	transmission	protein
HSBP1	PF06825.7	gi|15922788|ref|NP_378457.1|	-	0.56	9.8	11.3	6.1	6.5	7.8	2.1	1	1	0	1	1	1	0	Heat	shock	factor	binding	protein	1
BLOC1_2	PF10046.4	gi|15922788|ref|NP_378457.1|	-	0.61	10.2	4.9	4.1	7.5	3.4	1.9	1	1	0	1	1	1	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
TcdB_N	PF12918.2	gi|15922788|ref|NP_378457.1|	-	0.64	10.1	3.5	2.3	8.3	0.3	2.1	1	1	1	2	2	2	0	TcdB	toxin	N-terminal	helical	domain
Rad50_zn_hook	PF04423.9	gi|15922788|ref|NP_378457.1|	-	0.76	9.2	3.4	1.2	8.6	1.2	2.0	2	1	0	2	2	2	0	Rad50	zinc	hook	motif
Borrelia_REV	PF03978.8	gi|15922788|ref|NP_378457.1|	-	0.77	9.4	5.4	0.64	9.7	1.8	1.7	1	1	0	1	1	1	0	Borrelia	burgdorferi	REV	protein
DASH_Dam1	PF08653.5	gi|15922788|ref|NP_378457.1|	-	0.81	9.4	3.6	7.4	6.4	0.1	2.3	1	1	2	3	3	3	0	DASH	complex	subunit	Dam1
Cauli_DNA-bind	PF03310.8	gi|15922788|ref|NP_378457.1|	-	1	9.1	3.4	1.2	9.0	2.3	1.1	1	0	0	1	1	1	0	Caulimovirus	DNA-binding	protein
Snf7	PF03357.16	gi|15922788|ref|NP_378457.1|	-	1.1	8.6	11.9	1.2	8.4	8.2	1.1	1	0	0	1	1	1	0	Snf7
HisKA	PF00512.20	gi|15922788|ref|NP_378457.1|	-	1.2	9.1	4.2	2.1	8.3	0.5	2.0	1	1	1	2	2	2	0	His	Kinase	A	(phospho-acceptor)	domain
Sipho_Gp157	PF05565.6	gi|15922788|ref|NP_378457.1|	-	1.7	8.2	5.6	2.7	7.5	3.9	1.4	1	1	0	1	1	1	0	Siphovirus	Gp157
DUF2664	PF10867.3	gi|15922788|ref|NP_378457.1|	-	1.9	9.1	7.8	7	7.3	0.7	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2664)
DUF1664	PF07889.7	gi|15922788|ref|NP_378457.1|	-	2.1	8.1	5.1	2.9	7.6	3.6	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
Hemagglutinin	PF00509.13	gi|15922788|ref|NP_378457.1|	-	2.4	6.2	4.2	2.8	5.9	2.9	1.1	1	0	0	1	1	1	0	Haemagglutinin
TraF_2	PF13729.1	gi|15922788|ref|NP_378457.1|	-	2.5	6.8	6.8	2.9	6.6	4.7	1.3	1	0	0	1	1	1	0	F	plasmid	transfer	operon,	TraF,	protein
Orthopox_A5L	PF06193.6	gi|15922788|ref|NP_378457.1|	-	2.9	7.8	7.4	12	5.7	5.1	1.8	1	1	0	1	1	1	0	Orthopoxvirus	A5L	protein-like
DUF1837	PF08878.6	gi|15922788|ref|NP_378457.1|	-	3.3	7.2	8.0	3.7	7.0	5.5	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1837)
YqzM	PF14141.1	gi|15922788|ref|NP_378457.1|	-	5.4	6.8	5.4	1	9.2	0.5	2.1	2	1	0	2	2	2	0	YqzM-like	protein
MT0933_antitox	PF14013.1	gi|15922788|ref|NP_378457.1|	-	6.4	6.9	6.9	18	5.4	4.8	1.8	1	1	0	1	1	1	0	MT0933-like	antitoxin	protein
Strep_SA_rep	PF06696.6	gi|15922789|ref|NP_378458.1|	-	0.15	11.8	1.5	1.2	8.9	0.0	2.3	2	0	0	2	2	2	0	Streptococcal	surface	antigen	repeat
MCPsignal	PF00015.16	gi|15922791|ref|NP_378460.1|	-	5.8e-06	25.9	1.7	0.00034	20.2	0.2	2.1	1	1	1	2	2	2	1	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
BLOC1_2	PF10046.4	gi|15922791|ref|NP_378460.1|	-	2.3e-05	24.4	18.4	0.0038	17.3	3.5	2.2	1	1	1	2	2	2	2	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Laminin_I	PF06008.9	gi|15922791|ref|NP_378460.1|	-	3.8e-05	23.1	8.1	5.4e-05	22.6	5.6	1.2	1	0	0	1	1	1	1	Laminin	Domain	I
MutS_III	PF05192.13	gi|15922791|ref|NP_378460.1|	-	0.00014	21.7	6.3	0.00018	21.3	4.4	1.2	1	0	0	1	1	1	1	MutS	domain	III
HAUS-augmin3	PF14932.1	gi|15922791|ref|NP_378460.1|	-	0.00019	20.7	8.8	0.00028	20.1	6.1	1.3	1	0	0	1	1	1	1	HAUS	augmin-like	complex	subunit	3
MscS_porin	PF12795.2	gi|15922791|ref|NP_378460.1|	-	0.00023	20.5	3.4	0.0032	16.8	1.0	2.1	1	1	1	2	2	2	1	Mechanosensitive	ion	channel	porin	domain
Spc7	PF08317.6	gi|15922791|ref|NP_378460.1|	-	0.0007	18.3	14.8	0.00091	17.9	10.2	1.3	1	0	0	1	1	1	1	Spc7	kinetochore	protein
CCDC155	PF14662.1	gi|15922791|ref|NP_378460.1|	-	0.001	18.7	10.4	0.0016	18.0	7.2	1.4	1	0	0	1	1	1	1	Coiled-coil	region	of	CCDC155
Arfaptin	PF06456.8	gi|15922791|ref|NP_378460.1|	-	0.001	18.4	8.7	0.0035	16.7	2.8	2.1	1	1	1	2	2	2	1	Arfaptin-like	domain
Tropomyosin	PF00261.15	gi|15922791|ref|NP_378460.1|	-	0.0012	17.9	10.6	0.0018	17.4	7.4	1.4	1	0	0	1	1	1	1	Tropomyosin
GCOM2	PF15328.1	gi|15922791|ref|NP_378460.1|	-	0.0013	18.5	3.8	0.0018	18.0	2.7	1.2	1	0	0	1	1	1	1	Putative	GRINL1B	complex	locus	protein	2
SlyX	PF04102.7	gi|15922791|ref|NP_378460.1|	-	0.0013	19.0	5.7	0.0013	19.0	3.9	3.2	2	1	2	4	4	3	1	SlyX
Reo_sigmaC	PF04582.7	gi|15922791|ref|NP_378460.1|	-	0.0016	17.6	0.5	0.011	14.9	0.2	1.8	1	1	2	3	3	3	2	Reovirus	sigma	C	capsid	protein
HSBP1	PF06825.7	gi|15922791|ref|NP_378460.1|	-	0.0021	17.6	1.3	2.3	7.8	0.0	4.6	1	1	2	3	3	3	0	Heat	shock	factor	binding	protein	1
DUF745	PF05335.8	gi|15922791|ref|NP_378460.1|	-	0.0034	16.9	5.2	0.0051	16.3	3.6	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF745)
WXG100	PF06013.7	gi|15922791|ref|NP_378460.1|	-	0.005	16.8	2.4	0.14	12.1	0.1	3.1	1	1	1	3	3	3	1	Proteins	of	100	residues	with	WXG
Orbi_VP5	PF00901.12	gi|15922791|ref|NP_378460.1|	-	0.0054	15.0	13.4	0.12	10.5	9.2	2.0	1	1	1	2	2	2	1	Orbivirus	outer	capsid	protein	VP5
RmuC	PF02646.11	gi|15922791|ref|NP_378460.1|	-	0.0054	15.6	10.9	0.0059	15.4	1.4	2.7	1	1	0	2	2	2	1	RmuC	family
NPV_P10	PF05531.7	gi|15922791|ref|NP_378460.1|	-	0.006	16.8	4.8	0.2	11.9	1.5	3.1	1	1	1	2	2	2	1	Nucleopolyhedrovirus	P10	protein
Herpes_U30	PF04523.8	gi|15922791|ref|NP_378460.1|	-	0.012	13.1	2.8	0.014	12.8	2.0	1.2	1	0	0	1	1	1	0	Herpes	virus	tegument	protein	U30
APG17	PF04108.7	gi|15922791|ref|NP_378460.1|	-	0.014	14.2	13.9	0.12	11.2	5.5	2.2	1	1	1	2	2	2	0	Autophagy	protein	Apg17
Prominin	PF05478.6	gi|15922791|ref|NP_378460.1|	-	0.015	12.9	4.7	0.019	12.5	3.3	1.1	1	0	0	1	1	1	0	Prominin
RNase_T	PF00929.19	gi|15922791|ref|NP_378460.1|	-	0.017	15.4	2.3	0.031	14.5	1.5	1.6	1	1	0	1	1	1	0	Exonuclease
DUF1664	PF07889.7	gi|15922791|ref|NP_378460.1|	-	0.017	14.9	11.1	0.57	9.9	0.2	2.7	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
Laminin_II	PF06009.7	gi|15922791|ref|NP_378460.1|	-	0.019	14.6	8.4	0.26	11.0	2.3	2.4	1	1	1	2	2	2	0	Laminin	Domain	II
V-SNARE_C	PF12352.3	gi|15922791|ref|NP_378460.1|	-	0.022	14.8	2.5	0.7	10.0	0.6	2.4	2	0	0	2	2	2	0	Snare	region	anchored	in	the	vesicle	membrane	C-terminus
ING	PF12998.2	gi|15922791|ref|NP_378460.1|	-	0.032	14.4	15.8	0.11	12.7	7.5	2.4	1	1	1	2	2	2	0	Inhibitor	of	growth	proteins	N-terminal	histone-binding
DUF4298	PF14131.1	gi|15922791|ref|NP_378460.1|	-	0.034	14.0	13.3	0.61	9.9	1.4	3.7	1	1	3	4	4	4	0	Domain	of	unknown	function	(DUF4298)
Nsp1_C	PF05064.8	gi|15922791|ref|NP_378460.1|	-	0.039	13.5	10.2	0.062	12.9	0.6	2.5	1	1	1	2	2	2	0	Nsp1-like	C-terminal	region
V_ATPase_I	PF01496.14	gi|15922791|ref|NP_378460.1|	-	0.042	11.7	14.2	0.096	10.5	9.8	1.6	1	1	1	2	2	2	0	V-type	ATPase	116kDa	subunit	family
Phycobilisome	PF00502.14	gi|15922791|ref|NP_378460.1|	-	0.048	13.4	0.3	1.5	8.5	0.0	2.3	1	1	1	2	2	2	0	Phycobilisome	protein
Nup54	PF13874.1	gi|15922791|ref|NP_378460.1|	-	0.056	13.1	8.9	1.8	8.2	2.9	2.4	1	1	1	2	2	2	0	Nucleoporin	complex	subunit	54
HSL_N	PF06350.7	gi|15922791|ref|NP_378460.1|	-	0.067	12.2	1.2	1.4	7.9	0.1	2.3	1	1	1	2	2	2	0	Hormone-sensitive	lipase	(HSL)	N-terminus
SNARE	PF05739.14	gi|15922791|ref|NP_378460.1|	-	0.069	12.8	7.8	0.089	12.4	2.2	3.3	1	1	1	3	3	3	0	SNARE	domain
AAA_13	PF13166.1	gi|15922791|ref|NP_378460.1|	-	0.074	11.5	18.6	0.032	12.7	9.4	1.8	1	1	1	2	2	2	0	AAA	domain
CHASE3	PF05227.8	gi|15922791|ref|NP_378460.1|	-	0.09	12.4	4.3	0.26	10.9	2.5	2.2	1	1	0	1	1	1	0	CHASE3	domain
DUF948	PF06103.6	gi|15922791|ref|NP_378460.1|	-	0.12	12.2	5.0	1.5	8.7	3.1	2.5	1	1	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF948)
SOG2	PF10428.4	gi|15922791|ref|NP_378460.1|	-	0.13	10.8	2.7	5.5	5.5	0.0	2.1	1	1	0	2	2	2	0	RAM	signalling	pathway	protein
Peptidase_S46	PF10459.4	gi|15922791|ref|NP_378460.1|	-	0.14	10.5	3.9	0.16	10.3	2.7	1.0	1	0	0	1	1	1	0	Peptidase	S46
ALMT	PF11744.3	gi|15922791|ref|NP_378460.1|	-	0.15	10.6	2.4	0.19	10.3	1.6	1.2	1	0	0	1	1	1	0	Aluminium	activated	malate	transporter
APG6	PF04111.7	gi|15922791|ref|NP_378460.1|	-	0.18	10.8	11.2	0.25	10.3	7.7	1.3	1	0	0	1	1	1	0	Autophagy	protein	Apg6
Syntaxin-18_N	PF10496.4	gi|15922791|ref|NP_378460.1|	-	0.24	11.2	6.2	0.21	11.4	2.5	2.4	1	1	1	2	2	2	0	SNARE-complex	protein	Syntaxin-18	N-terminus
DUF892	PF05974.7	gi|15922791|ref|NP_378460.1|	-	0.25	11.1	11.2	1.2	8.9	1.1	2.5	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF892)
Fib_alpha	PF08702.5	gi|15922791|ref|NP_378460.1|	-	0.31	11.1	13.0	1.3	9.0	5.6	2.3	1	1	1	2	2	2	0	Fibrinogen	alpha/beta	chain	family
LOH1CR12	PF10158.4	gi|15922791|ref|NP_378460.1|	-	0.32	10.7	10.6	0.16	11.7	4.2	2.3	1	1	1	2	2	2	0	Tumour	suppressor	protein
Uds1	PF15456.1	gi|15922791|ref|NP_378460.1|	-	0.33	10.9	14.9	0.26	11.2	4.7	2.4	1	1	1	2	2	2	0	Up-regulated	During	Septation
Sugarporin_N	PF11471.3	gi|15922791|ref|NP_378460.1|	-	0.33	10.6	10.7	0.27	10.9	4.9	2.6	1	1	2	3	3	3	0	Maltoporin	periplasmic	N-terminal	extension
DASH_Duo1	PF08651.5	gi|15922791|ref|NP_378460.1|	-	0.35	10.4	8.5	0.43	10.1	1.3	2.9	1	1	3	4	4	4	0	DASH	complex	subunit	Duo1
DUF1098	PF06497.6	gi|15922791|ref|NP_378460.1|	-	0.41	10.7	4.1	1.5	8.9	0.1	2.7	1	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1098)
DUF4200	PF13863.1	gi|15922791|ref|NP_378460.1|	-	0.43	10.5	19.7	1.2	9.0	13.7	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4200)
Mgr1	PF08602.5	gi|15922791|ref|NP_378460.1|	-	0.5	9.3	5.6	0.62	9.0	3.9	1.2	1	0	0	1	1	1	0	Mgr1-like,	i-AAA	protease	complex	subunit
LMBR1	PF04791.11	gi|15922791|ref|NP_378460.1|	-	0.57	8.7	3.3	0.64	8.5	2.3	1.2	1	0	0	1	1	1	0	LMBR1-like	membrane	protein
Glutaredoxin2_C	PF04399.8	gi|15922791|ref|NP_378460.1|	-	0.62	9.6	7.3	5.4	6.5	2.4	2.9	1	1	3	4	4	4	0	Glutaredoxin	2,	C	terminal	domain
Phage_GP20	PF06810.6	gi|15922791|ref|NP_378460.1|	-	0.63	9.4	13.8	0.79	9.1	1.0	2.3	1	1	1	2	2	2	0	Phage	minor	structural	protein	GP20
TMPIT	PF07851.8	gi|15922791|ref|NP_378460.1|	-	0.66	8.9	12.3	0.59	9.1	4.6	1.8	1	1	1	2	2	2	0	TMPIT-like	protein
DUF651	PF04895.7	gi|15922791|ref|NP_378460.1|	-	0.68	9.5	5.2	2.6	7.7	0.8	2.6	1	1	1	2	2	2	0	Archaeal	protein	of	unknown	function	(DUF651)
KxDL	PF10241.4	gi|15922791|ref|NP_378460.1|	-	0.71	9.8	12.3	6.3	6.7	1.5	3.6	1	1	3	4	4	4	0	Uncharacterized	conserved	protein
DUF4446	PF14584.1	gi|15922791|ref|NP_378460.1|	-	0.72	9.6	12.6	1.4	8.7	2.9	2.9	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF4446)
DUF1978	PF09321.5	gi|15922791|ref|NP_378460.1|	-	0.76	9.1	20.4	0.11	11.9	8.6	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF1978)
FlgN	PF05130.7	gi|15922791|ref|NP_378460.1|	-	0.78	9.9	11.6	0.94	9.7	6.4	2.0	1	1	1	2	2	2	0	FlgN	protein
Peptidase_C6	PF00851.13	gi|15922791|ref|NP_378460.1|	-	0.87	8.1	7.3	1.8	7.0	4.5	1.4	1	1	0	1	1	1	0	Helper	component	proteinase
ATG16	PF08614.6	gi|15922791|ref|NP_378460.1|	-	0.91	9.3	14.5	4.5	7.0	7.7	2.2	1	1	1	2	2	2	0	Autophagy	protein	16	(ATG16)
TPR_MLP1_2	PF07926.7	gi|15922791|ref|NP_378460.1|	-	1	9.1	17.8	1.7	8.4	12.3	1.5	1	1	0	1	1	1	0	TPR/MLP1/MLP2-like	protein
Matrilin_ccoil	PF10393.4	gi|15922791|ref|NP_378460.1|	-	1.1	8.7	7.0	17	4.9	1.2	3.4	2	1	1	3	3	3	0	Trimeric	coiled-coil	oligomerisation	domain	of	matrilin
Syntaxin-6_N	PF09177.6	gi|15922791|ref|NP_378460.1|	-	1.2	9.6	9.7	8.7	6.8	6.4	2.5	1	1	1	2	2	2	0	Syntaxin	6,	N-terminal
UPF0449	PF15136.1	gi|15922791|ref|NP_378460.1|	-	1.2	9.3	9.3	0.74	10.0	2.6	2.5	1	1	1	2	2	2	0	Uncharacterised	protein	family	UPF0449
DUF342	PF03961.8	gi|15922791|ref|NP_378460.1|	-	1.3	7.4	15.3	2.3	6.5	10.5	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
Sec20	PF03908.8	gi|15922791|ref|NP_378460.1|	-	1.4	8.7	7.6	5.6	6.7	1.4	2.8	1	1	3	4	4	4	0	Sec20
DUF479	PF04336.7	gi|15922791|ref|NP_378460.1|	-	1.6	8.8	6.2	29	4.8	4.3	2.9	1	1	0	1	1	1	0	Protein	of	unknown	function,	DUF479
TMF_TATA_bd	PF12325.3	gi|15922791|ref|NP_378460.1|	-	2	8.1	19.6	6.7	6.4	10.6	2.3	1	1	2	3	3	3	0	TATA	element	modulatory	factor	1	TATA	binding
Occludin_ELL	PF07303.8	gi|15922791|ref|NP_378460.1|	-	2.7	8.7	14.0	6.1	7.6	8.2	2.6	1	1	3	4	4	3	0	Occludin	homology	domain
Prefoldin_2	PF01920.15	gi|15922791|ref|NP_378460.1|	-	2.8	7.7	18.8	2.9	7.6	1.1	2.8	1	1	1	2	2	2	0	Prefoldin	subunit
Streptin-Immun	PF11083.3	gi|15922791|ref|NP_378460.1|	-	2.9	7.9	15.4	2.7	8.0	2.3	2.8	1	1	1	2	2	2	0	Lantibiotic	streptin	immunity	protein
Snapin_Pallidin	PF14712.1	gi|15922791|ref|NP_378460.1|	-	2.9	8.2	12.5	0.35	11.1	1.3	2.6	1	1	2	3	3	3	0	Snapin/Pallidin
Atg14	PF10186.4	gi|15922791|ref|NP_378460.1|	-	2.9	6.7	9.2	3.9	6.3	6.3	1.2	1	0	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
IncA	PF04156.9	gi|15922791|ref|NP_378460.1|	-	3	7.4	19.1	9.1	5.8	13.2	1.8	1	1	0	1	1	1	0	IncA	protein
DUF16	PF01519.11	gi|15922791|ref|NP_378460.1|	-	3.6	7.8	15.7	21	5.4	0.0	3.6	1	1	1	2	2	1	0	Protein	of	unknown	function	DUF16
FolB	PF02152.13	gi|15922791|ref|NP_378460.1|	-	3.6	7.7	10.1	1.5	9.0	0.6	2.8	1	1	1	2	2	2	0	Dihydroneopterin	aldolase
NYD-SP28_assoc	PF14775.1	gi|15922791|ref|NP_378460.1|	-	4.4	7.0	12.1	2.8	7.7	0.1	3.3	1	1	2	3	3	3	0	Sperm	tail	C-terminal	domain
Flu_NS2	PF00601.14	gi|15922791|ref|NP_378460.1|	-	4.9	7.4	12.7	12	6.1	0.5	2.7	1	1	1	2	2	2	0	Influenza	non-structural	protein	(NS2)
DUF2216	PF10226.4	gi|15922791|ref|NP_378460.1|	-	5.5	6.4	16.0	7.2	6.0	8.6	2.3	1	1	2	3	3	3	0	Uncharacterized	conserved	proteins	(DUF2216)
DUF1759	PF03564.10	gi|15922791|ref|NP_378460.1|	-	5.5	6.7	13.2	1.9	8.2	2.9	2.9	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF1759)
FCH	PF00611.18	gi|15922791|ref|NP_378460.1|	-	6.6	6.9	13.1	1.8	8.7	4.2	2.5	1	1	1	2	2	2	0	Fes/CIP4,	and	EFC/F-BAR	homology	domain
FliT	PF05400.8	gi|15922791|ref|NP_378460.1|	-	9.7	6.6	11.0	3.9	7.9	3.4	2.5	1	1	1	2	2	2	0	Flagellar	protein	FliT
DUF3552	PF12072.3	gi|15922791|ref|NP_378460.1|	-	9.9	5.3	19.3	10	5.2	7.1	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3552)
DEAD	PF00270.24	gi|15922792|ref|NP_378461.1|	-	1.3e-42	145.1	0.2	4.3e-42	143.4	0.1	1.8	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|15922792|ref|NP_378461.1|	-	1.8e-24	85.4	0.1	8.9e-24	83.1	0.0	2.1	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|15922792|ref|NP_378461.1|	-	2.8e-06	27.2	0.0	6.8e-06	26.0	0.0	1.8	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
CMS1	PF14617.1	gi|15922792|ref|NP_378461.1|	-	0.0064	15.6	0.1	0.011	14.8	0.0	1.5	1	0	0	1	1	1	1	U3-containing	90S	pre-ribosomal	complex	subunit
AAA_19	PF13245.1	gi|15922792|ref|NP_378461.1|	-	0.0091	15.7	0.4	0.022	14.4	0.1	1.8	2	0	0	2	2	2	1	Part	of	AAA	domain
SecA_DEAD	PF07517.9	gi|15922792|ref|NP_378461.1|	-	0.022	14.0	1.0	0.06	12.6	0.5	1.6	1	1	0	1	1	1	0	SecA	DEAD-like	domain
DEAD_2	PF06733.10	gi|15922792|ref|NP_378461.1|	-	0.063	12.6	0.0	0.16	11.3	0.0	1.6	1	0	0	1	1	1	0	DEAD_2
T4SS-DNA_transf	PF02534.9	gi|15922792|ref|NP_378461.1|	-	0.08	11.5	0.2	0.14	10.7	0.0	1.4	2	0	0	2	2	2	0	Type	IV	secretory	system	Conjugative	DNA	transfer
Glyoxalase_5	PF14696.1	gi|15922792|ref|NP_378461.1|	-	0.1	12.5	0.0	2.7	7.9	0.0	2.5	2	0	0	2	2	2	0	Hydroxyphenylpyruvate	dioxygenase,	HPPD,	N-terminal
DUF1253	PF06862.7	gi|15922792|ref|NP_378461.1|	-	0.12	10.7	1.1	0.94	7.8	0.3	2.1	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1253)
AAA_22	PF13401.1	gi|15922792|ref|NP_378461.1|	-	0.33	11.1	1.3	4.5	7.4	0.9	2.4	1	1	0	1	1	1	0	AAA	domain
Pkinase	PF00069.20	gi|15922793|ref|NP_378462.1|	-	0.062	12.4	0.5	0.12	11.5	0.1	1.7	1	1	0	2	2	2	0	Protein	kinase	domain
Chaperone_III	PF07824.7	gi|15922793|ref|NP_378462.1|	-	0.097	12.5	0.0	0.14	12.0	0.0	1.4	1	0	0	1	1	1	0	Type	III	secretion	chaperone	domain
DUF340	PF03956.8	gi|15922794|ref|NP_378463.1|	-	3.7e-52	176.4	14.0	3.7e-52	176.4	9.7	2.1	2	0	0	2	2	2	1	Membrane	protein	of	unknown	function	(DUF340)
DUF897	PF05982.7	gi|15922794|ref|NP_378463.1|	-	1.8	7.2	27.0	0.049	12.4	5.5	2.8	3	1	1	4	4	4	0	Domain	of	unknown	function	(DUF897)
MFS_1	PF07690.11	gi|15922795|ref|NP_378464.1|	-	2.6e-38	131.6	50.0	2.6e-38	131.6	34.6	2.0	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
DUF3007	PF11460.3	gi|15922795|ref|NP_378464.1|	-	0.1	12.7	1.6	0.61	10.1	1.1	2.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3007)
zf-ribbon_3	PF13248.1	gi|15922796|ref|NP_378465.1|	-	1.3e-07	30.5	0.7	2.2e-07	29.8	0.5	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|15922796|ref|NP_378465.1|	-	2.3e-06	26.8	0.5	4e-06	26.1	0.3	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|15922796|ref|NP_378465.1|	-	6.8e-06	25.8	0.5	1.2e-05	25.0	0.3	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
Nudix_N_2	PF14803.1	gi|15922796|ref|NP_378465.1|	-	0.0067	16.0	3.0	0.42	10.3	0.2	2.4	2	0	0	2	2	2	1	Nudix	N-terminal
HypA	PF01155.14	gi|15922796|ref|NP_378465.1|	-	0.052	13.2	0.0	0.081	12.6	0.0	1.3	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
Cys_rich_CPXG	PF14255.1	gi|15922796|ref|NP_378465.1|	-	0.068	13.0	3.7	2.6	7.9	0.2	2.6	2	0	0	2	2	2	0	Cysteine-rich	CPXCG
UPF0547	PF10571.4	gi|15922796|ref|NP_378465.1|	-	0.068	12.8	6.9	0.25	11.0	4.8	1.9	1	1	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
zf-IS66	PF13005.2	gi|15922796|ref|NP_378465.1|	-	0.16	11.9	1.9	10	6.1	0.1	2.5	2	0	0	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
zf-C2H2	PF00096.21	gi|15922796|ref|NP_378465.1|	-	0.29	11.5	3.3	5.4	7.5	0.1	2.6	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
Zn-ribbon_8	PF09723.5	gi|15922796|ref|NP_378465.1|	-	0.47	10.4	8.0	45	4.1	3.5	3.2	2	1	0	2	2	2	0	Zinc	ribbon	domain
zf-Di19	PF05605.7	gi|15922796|ref|NP_378465.1|	-	0.72	10.0	3.0	13	6.0	0.1	2.4	2	0	0	2	2	2	0	Drought	induced	19	protein	(Di19),	zinc-binding
zf-C2H2_4	PF13894.1	gi|15922796|ref|NP_378465.1|	-	0.8	10.1	4.5	10	6.6	0.1	2.8	1	1	1	2	2	2	0	C2H2-type	zinc	finger
zf-HIT	PF04438.11	gi|15922796|ref|NP_378465.1|	-	1.1	8.9	4.6	0.83	9.3	1.7	1.9	1	1	0	1	1	1	0	HIT	zinc	finger
DUF2296	PF10058.4	gi|15922796|ref|NP_378465.1|	-	2.1	8.1	5.5	2.3	8.0	0.1	2.7	3	0	0	3	3	3	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
DUF164	PF02591.10	gi|15922796|ref|NP_378465.1|	-	2.1	8.2	6.8	1.3	8.9	0.1	2.7	2	1	1	3	3	3	0	Putative	zinc	ribbon	domain
DUF1610	PF07754.6	gi|15922796|ref|NP_378465.1|	-	2.3	8.4	5.7	5.7	7.1	0.3	2.8	3	0	0	3	3	2	0	Domain	of	unknown	function	(DUF1610)
Zn_Tnp_IS1595	PF12760.2	gi|15922796|ref|NP_378465.1|	-	4.2	7.2	7.6	58	3.6	1.0	2.3	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
zf-ISL3	PF14690.1	gi|15922796|ref|NP_378465.1|	-	9.6	6.3	9.1	13	5.9	0.8	2.5	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Na_Ca_ex	PF01699.19	gi|15922797|ref|NP_378466.1|	-	1.2e-27	96.2	23.6	1.1e-15	57.4	4.2	2.1	2	0	0	2	2	2	2	Sodium/calcium	exchanger	protein
DUF202	PF02656.10	gi|15922798|ref|NP_378467.1|	-	5.9e-20	71.2	0.5	5.9e-20	71.2	0.3	1.8	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF202)
DUF2910	PF11139.3	gi|15922798|ref|NP_378467.1|	-	0.0032	16.6	0.7	0.0039	16.3	0.5	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2910)
GRIM-19	PF06212.7	gi|15922798|ref|NP_378467.1|	-	0.0036	16.9	0.1	0.0058	16.3	0.0	1.4	1	1	0	1	1	1	1	GRIM-19	protein
Claudin_2	PF13903.1	gi|15922798|ref|NP_378467.1|	-	0.0053	16.4	4.3	0.01	15.5	3.0	1.5	1	1	0	1	1	1	1	PMP-22/EMP/MP20/Claudin	tight	junction
Tetraspannin	PF00335.15	gi|15922798|ref|NP_378467.1|	-	0.016	14.4	3.1	0.024	13.9	2.1	1.3	1	0	0	1	1	1	0	Tetraspanin	family
DUF4064	PF13273.1	gi|15922798|ref|NP_378467.1|	-	0.017	15.2	2.1	0.017	15.2	1.4	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4064)
DUF1352	PF07086.7	gi|15922798|ref|NP_378467.1|	-	0.024	14.2	1.5	0.032	13.8	0.8	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1352)
PalH	PF08733.5	gi|15922798|ref|NP_378467.1|	-	0.032	13.0	2.6	0.034	12.9	1.8	1.1	1	0	0	1	1	1	0	PalH/RIM21
NMN_transporter	PF04973.7	gi|15922798|ref|NP_378467.1|	-	0.036	13.5	3.5	0.2	11.1	2.4	1.8	1	1	1	2	2	2	0	Nicotinamide	mononucleotide	transporter
Yip1	PF04893.12	gi|15922798|ref|NP_378467.1|	-	0.09	12.2	4.9	0.032	13.7	1.4	1.6	1	1	0	1	1	1	0	Yip1	domain
SdpI	PF13630.1	gi|15922798|ref|NP_378467.1|	-	0.18	11.5	9.4	0.069	12.8	1.7	2.2	1	1	1	2	2	2	0	SdpI/YhfL	protein	family
DUF1129	PF06570.6	gi|15922798|ref|NP_378467.1|	-	0.18	11.0	3.0	0.23	10.7	2.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1129)
DUF998	PF06197.8	gi|15922798|ref|NP_378467.1|	-	0.2	10.9	8.2	0.76	9.0	5.7	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF998)
Neurensin	PF14927.1	gi|15922798|ref|NP_378467.1|	-	0.2	11.0	1.2	0.27	10.6	0.8	1.5	1	1	0	1	1	1	0	Neurensin
FtsX	PF02687.16	gi|15922798|ref|NP_378467.1|	-	0.29	10.8	7.4	0.77	9.5	5.1	1.8	1	1	0	1	1	1	0	FtsX-like	permease	family
zf-DHHC	PF01529.15	gi|15922798|ref|NP_378467.1|	-	0.35	10.2	3.5	0.59	9.5	2.4	1.5	1	1	0	1	1	1	0	DHHC	palmitoyltransferase
YesK	PF14150.1	gi|15922798|ref|NP_378467.1|	-	0.37	10.9	7.2	0.64	10.1	1.7	2.1	1	1	1	2	2	2	0	YesK-like	protein
PgaD	PF13994.1	gi|15922798|ref|NP_378467.1|	-	0.6	9.5	3.3	0.54	9.7	0.4	1.8	1	1	1	2	2	2	0	PgaD-like	protein
DUF2628	PF10947.3	gi|15922798|ref|NP_378467.1|	-	0.79	9.5	7.2	0.15	11.8	1.7	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2628)
YtpI	PF14007.1	gi|15922798|ref|NP_378467.1|	-	0.91	9.4	8.3	0.26	11.2	3.0	1.9	1	1	1	2	2	2	0	YtpI-like	protein
DUF373	PF04123.8	gi|15922798|ref|NP_378467.1|	-	0.98	8.3	5.2	1.2	8.1	3.6	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF373)
PrgI	PF12666.2	gi|15922798|ref|NP_378467.1|	-	0.99	9.5	5.5	0.17	12.0	0.8	1.8	2	0	0	2	2	2	0	PrgI	family	protein
Ycf4	PF02392.11	gi|15922798|ref|NP_378467.1|	-	9.1	5.5	7.2	2.4	7.4	2.0	1.8	1	1	1	2	2	2	0	Ycf4
GTP_EFTU_D2	PF03144.20	gi|15922799|ref|NP_378468.1|	-	0.22	11.6	0.2	0.22	11.6	0.2	2.5	3	0	0	3	3	3	0	Elongation	factor	Tu	domain	2
Resolvase	PF00239.16	gi|15922800|ref|NP_378469.1|	-	3e-19	69.2	0.2	4.5e-19	68.7	0.1	1.2	1	0	0	1	1	1	1	Resolvase,	N	terminal	domain
HTH_17	PF12728.2	gi|15922800|ref|NP_378469.1|	-	4e-15	55.7	0.7	7.8e-15	54.8	0.5	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
MerR	PF00376.18	gi|15922800|ref|NP_378469.1|	-	1.5e-06	27.6	0.1	3.7e-06	26.4	0.1	1.7	1	0	0	1	1	1	1	MerR	family	regulatory	protein
MerR_1	PF13411.1	gi|15922800|ref|NP_378469.1|	-	7.4e-05	22.4	0.1	0.00017	21.2	0.1	1.7	1	0	0	1	1	1	1	MerR	HTH	family	regulatory	protein
HTH_23	PF13384.1	gi|15922800|ref|NP_378469.1|	-	0.00043	19.8	0.0	0.0013	18.2	0.0	1.8	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.1	gi|15922800|ref|NP_378469.1|	-	0.00093	19.1	1.0	0.0023	17.9	0.0	2.1	3	0	0	3	3	3	1	Helix-turn-helix	domain
Exc	PF07825.6	gi|15922800|ref|NP_378469.1|	-	0.0076	15.9	0.1	0.012	15.3	0.1	1.3	1	0	0	1	1	1	1	Excisionase-like	protein
Phage_AlpA	PF05930.7	gi|15922800|ref|NP_378469.1|	-	0.011	15.4	0.0	0.02	14.5	0.0	1.4	1	0	0	1	1	1	0	Prophage	CP4-57	regulatory	protein	(AlpA)
HTH_29	PF13551.1	gi|15922800|ref|NP_378469.1|	-	0.012	15.7	0.1	0.028	14.5	0.0	1.8	2	1	0	2	2	2	0	Winged	helix-turn	helix
HTH_8	PF02954.14	gi|15922800|ref|NP_378469.1|	-	0.1	12.1	0.0	0.21	11.1	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	Fis	family
OrfB_Zn_ribbon	PF07282.6	gi|15922801|ref|NP_378470.1|	-	6.5e-18	64.1	0.0	1.2e-17	63.2	0.0	1.5	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|15922801|ref|NP_378470.1|	-	0.00027	20.3	1.4	0.00051	19.5	0.9	1.4	1	0	0	1	1	1	1	Probable	transposase
SRF-TF	PF00319.13	gi|15922801|ref|NP_378470.1|	-	0.08	12.1	0.3	13	5.1	0.0	2.5	2	0	0	2	2	2	0	SRF-type	transcription	factor	(DNA-binding	and	dimerisation	domain)
PPR	PF01535.15	gi|15922801|ref|NP_378470.1|	-	0.14	12.1	2.2	32	4.7	0.0	3.4	3	0	0	3	3	3	0	PPR	repeat
Pox_A21	PF05323.7	gi|15922801|ref|NP_378470.1|	-	0.14	12.5	0.1	10	6.5	0.0	2.4	1	1	1	2	2	2	0	Poxvirus	A21	Protein
Phage_Gp14	PF10666.4	gi|15922801|ref|NP_378470.1|	-	0.42	10.4	2.7	0.77	9.6	0.2	2.2	2	0	0	2	2	2	0	Phage	protein	Gp14
PQQ_2	PF13360.1	gi|15922802|ref|NP_378471.1|	-	3.4e-38	131.4	9.4	9.4e-20	71.0	0.5	3.3	1	1	2	3	3	3	3	PQQ-like	domain
PQQ	PF01011.16	gi|15922802|ref|NP_378471.1|	-	2.9e-34	114.8	8.7	3e-06	26.4	0.0	7.7	7	0	0	7	7	7	6	PQQ	enzyme	repeat
PQQ_3	PF13570.1	gi|15922802|ref|NP_378471.1|	-	6.9e-12	45.2	28.3	0.00024	21.2	0.1	8.3	7	2	0	7	7	7	4	PQQ-like	domain
Metallophos_C	PF14008.1	gi|15922802|ref|NP_378471.1|	-	0.047	13.7	2.1	0.073	13.1	0.3	2.2	2	0	0	2	2	2	0	Iron/zinc	purple	acid	phosphatase-like	protein	C
Y_Y_Y	PF07495.8	gi|15922803|ref|NP_378472.1|	-	0.097	12.4	0.3	0.19	11.5	0.2	1.6	1	1	0	1	1	1	0	Y_Y_Y	domain
ABC_tran	PF00005.22	gi|15922805|ref|NP_378474.1|	-	7.7e-28	97.4	0.1	2e-27	96.1	0.0	1.6	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|15922805|ref|NP_378474.1|	-	8.3e-15	55.5	8.9	2e-08	34.5	0.4	2.6	2	1	1	3	3	3	2	AAA	domain
AAA_15	PF13175.1	gi|15922805|ref|NP_378474.1|	-	2.4e-08	33.4	6.9	5e-05	22.5	0.9	2.7	1	1	1	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|15922805|ref|NP_378474.1|	-	4e-05	22.9	0.6	0.017	14.3	0.1	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_22	PF13401.1	gi|15922805|ref|NP_378474.1|	-	0.00012	22.2	0.0	0.00035	20.7	0.0	1.7	2	1	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|15922805|ref|NP_378474.1|	-	0.001	19.0	0.1	0.0037	17.2	0.1	1.8	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_33	PF13671.1	gi|15922805|ref|NP_378474.1|	-	0.0052	16.6	0.0	0.011	15.6	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|15922805|ref|NP_378474.1|	-	0.0067	15.9	0.1	0.013	15.0	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
T2SE	PF00437.15	gi|15922805|ref|NP_378474.1|	-	0.009	14.9	0.0	0.015	14.1	0.0	1.4	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
RRM_6	PF14259.1	gi|15922805|ref|NP_378474.1|	-	0.011	15.6	0.0	1.7	8.6	0.0	2.5	2	0	0	2	2	2	0	RNA	recognition	motif	(a.k.a.	RRM,	RBD,	or	RNP	domain)
MobB	PF03205.9	gi|15922805|ref|NP_378474.1|	-	0.012	15.3	0.1	0.024	14.3	0.1	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_23	PF13476.1	gi|15922805|ref|NP_378474.1|	-	0.017	15.4	10.0	0.12	12.7	6.8	2.2	1	1	0	1	1	1	0	AAA	domain
SRP54	PF00448.17	gi|15922805|ref|NP_378474.1|	-	0.025	14.0	0.0	0.055	12.9	0.0	1.6	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA_17	PF13207.1	gi|15922805|ref|NP_378474.1|	-	0.026	15.3	0.2	0.058	14.2	0.1	1.8	1	1	0	2	2	2	0	AAA	domain
HTH_Mga	PF08280.6	gi|15922805|ref|NP_378474.1|	-	0.03	14.0	0.3	4.1	7.2	0.0	2.8	2	1	0	2	2	2	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
ArgK	PF03308.11	gi|15922805|ref|NP_378474.1|	-	0.044	12.5	0.0	0.073	11.8	0.0	1.3	1	0	0	1	1	1	0	ArgK	protein
AAA_28	PF13521.1	gi|15922805|ref|NP_378474.1|	-	0.089	12.7	0.0	0.84	9.5	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
DUF258	PF03193.11	gi|15922805|ref|NP_378474.1|	-	0.11	11.6	0.0	0.28	10.3	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
DsbD_2	PF13386.1	gi|15922806|ref|NP_378475.1|	-	0.0019	18.0	11.7	0.0022	17.7	3.6	2.6	1	1	2	3	3	3	1	Cytochrome	C	biogenesis	protein	transmembrane	region
NicO	PF03824.11	gi|15922806|ref|NP_378475.1|	-	0.01	15.1	2.0	0.01	15.1	1.4	3.1	1	1	1	3	3	3	0	High-affinity	nickel-transport	protein
LysE	PF01810.13	gi|15922806|ref|NP_378475.1|	-	0.057	12.6	7.0	0.17	11.1	4.9	1.9	1	1	0	1	1	1	0	LysE	type	translocator
Phage_holin_2	PF04550.7	gi|15922806|ref|NP_378475.1|	-	0.063	13.3	0.6	0.063	13.3	0.4	2.4	2	0	0	2	2	2	0	Phage	holin	family	2
DUF1129	PF06570.6	gi|15922806|ref|NP_378475.1|	-	9.3	5.4	12.6	6.6	5.9	0.0	3.6	2	1	2	4	4	4	0	Protein	of	unknown	function	(DUF1129)
Thermopsin	PF05317.6	gi|15922807|ref|NP_378476.1|	-	1.1e-66	224.4	19.9	1.1e-66	224.4	13.8	5.9	2	1	0	5	5	5	1	Thermopsin
AA_permease_2	PF13520.1	gi|15922808|ref|NP_378477.1|	-	4.3e-45	154.0	54.9	4.3e-45	154.0	38.1	2.9	1	1	1	3	3	3	1	Amino	acid	permease
AA_permease	PF00324.16	gi|15922808|ref|NP_378477.1|	-	4e-31	107.9	52.8	4e-31	107.9	36.6	2.2	2	0	0	2	2	2	1	Amino	acid	permease
Polysacc_synt_C	PF14667.1	gi|15922808|ref|NP_378477.1|	-	0.00016	21.5	14.6	0.00016	21.5	10.1	5.6	5	1	1	6	6	6	1	Polysaccharide	biosynthesis	C-terminal	domain
HTH_17	PF12728.2	gi|15922808|ref|NP_378477.1|	-	0.07	13.3	0.0	0.17	12.1	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
Aldedh	PF00171.17	gi|15922809|ref|NP_378478.1|	-	4.4e-113	378.0	0.0	5e-113	377.8	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
LuxC	PF05893.9	gi|15922809|ref|NP_378478.1|	-	1.6e-06	27.1	0.0	2.4e-06	26.5	0.0	1.3	1	0	0	1	1	1	1	Acyl-CoA	reductase	(LuxC)
PfkB	PF00294.19	gi|15922810|ref|NP_378479.1|	-	3.9e-42	144.4	0.0	4.7e-42	144.1	0.0	1.0	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
DHDPS	PF00701.17	gi|15922811|ref|NP_378480.1|	-	5.3e-42	143.4	0.0	6.3e-42	143.1	0.0	1.0	1	0	0	1	1	1	1	Dihydrodipicolinate	synthetase	family
EamA	PF00892.15	gi|15922812|ref|NP_378481.1|	-	2.6e-17	63.0	39.8	2.3e-10	40.5	10.7	2.6	2	1	0	2	2	2	2	EamA-like	transporter	family
EmrE	PF13536.1	gi|15922812|ref|NP_378481.1|	-	0.06	13.5	31.4	0.087	13.0	6.9	3.4	1	1	1	3	3	3	0	Multidrug	resistance	efflux	transporter
Phage_holin_3	PF05106.7	gi|15922812|ref|NP_378481.1|	-	1.1	9.2	3.9	0.56	10.2	0.3	2.3	2	1	1	3	3	3	0	Phage	holin	family	(Lysis	protein	S)
AA_permease_2	PF13520.1	gi|15922813|ref|NP_378482.1|	-	5.6e-29	100.9	75.4	5.6e-29	100.9	52.2	1.3	1	1	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|15922813|ref|NP_378482.1|	-	8.9e-09	34.1	65.2	2.4e-08	32.7	45.2	1.7	1	1	0	1	1	1	1	Amino	acid	permease
DUF423	PF04241.10	gi|15922813|ref|NP_378482.1|	-	1.7	8.6	24.4	2.5	8.0	1.0	5.1	3	2	2	5	5	5	0	Protein	of	unknown	function	(DUF423)
MacB_PCD	PF12704.2	gi|15922813|ref|NP_378482.1|	-	6.3	6.3	9.6	0.61	9.6	1.9	2.6	2	1	0	3	3	3	0	MacB-like	periplasmic	core	domain
Ald_Xan_dh_C2	PF02738.13	gi|15922814|ref|NP_378483.1|	-	6.1e-147	490.2	0.0	7.5e-147	489.9	0.0	1.0	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|15922814|ref|NP_378483.1|	-	1.9e-26	92.2	0.0	5.3e-26	90.8	0.0	1.8	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
SpoIIIAH	PF12685.2	gi|15922814|ref|NP_378483.1|	-	0.0021	17.5	0.2	0.0021	17.5	0.1	1.9	3	0	0	3	3	3	1	SpoIIIAH-like	protein
Pyr_redox_2	PF07992.9	gi|15922815|ref|NP_378484.1|	-	3.6e-13	49.8	0.0	6.5e-13	49.0	0.0	1.4	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|15922815|ref|NP_378484.1|	-	0.01	16.2	0.6	0.33	11.4	0.0	2.9	2	1	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.7	gi|15922815|ref|NP_378484.1|	-	0.016	14.1	0.0	1.7	7.5	0.0	2.6	3	0	0	3	3	3	0	Lycopene	cyclase	protein
NAD_binding_8	PF13450.1	gi|15922815|ref|NP_378484.1|	-	0.17	11.9	0.3	0.72	9.9	0.1	2.1	2	0	0	2	2	2	0	NAD(P)-binding	Rossmann-like	domain
DUF1641	PF07849.6	gi|15922817|ref|NP_378486.1|	-	4e-13	48.7	0.3	2.4e-12	46.2	0.0	2.6	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF1641)
DUF2286	PF10051.4	gi|15922817|ref|NP_378486.1|	-	1.8e-05	24.3	2.4	0.056	13.0	0.0	3.0	2	1	1	3	3	3	2	Uncharacterized	protein	conserved	in	archaea	(DUF2286)
DUF1539	PF07560.6	gi|15922817|ref|NP_378486.1|	-	0.013	15.3	4.6	0.69	9.7	0.1	3.3	2	1	0	3	3	3	0	Domain	of	Unknown	Function	(DUF1539)
Methyltransf_33	PF10017.4	gi|15922817|ref|NP_378486.1|	-	0.1	12.4	0.1	0.24	11.2	0.0	1.6	1	0	0	1	1	1	0	Histidine-specific	methyltransferase,	SAM-dependent
FlgN	PF05130.7	gi|15922817|ref|NP_378486.1|	-	0.13	12.4	3.7	3.6	7.8	0.7	2.5	2	0	0	2	2	2	0	FlgN	protein
DUF2670	PF10875.3	gi|15922817|ref|NP_378486.1|	-	0.26	11.3	2.8	0.93	9.5	0.7	2.4	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF2670)
COG5	PF10392.4	gi|15922817|ref|NP_378486.1|	-	0.28	11.1	3.6	0.79	9.6	0.1	2.7	1	1	1	2	2	2	0	Golgi	transport	complex	subunit	5
Med28	PF11594.3	gi|15922817|ref|NP_378486.1|	-	4.5	7.5	8.5	3.5e+02	1.4	3.0	4.2	1	1	1	2	2	2	0	Mediator	complex	subunit	28
PAT1	PF09770.4	gi|15922818|ref|NP_378487.1|	-	5.9	5.0	14.9	7.3	4.6	10.3	1.0	1	0	0	1	1	1	0	Topoisomerase	II-associated	protein	PAT1
DUF605	PF04652.11	gi|15922818|ref|NP_378487.1|	-	7.3	5.8	8.9	9.2	5.5	6.2	1.1	1	0	0	1	1	1	0	Vta1	like
Aldo_ket_red	PF00248.16	gi|15922819|ref|NP_378488.1|	-	7.6e-65	218.5	0.1	8.9e-65	218.3	0.1	1.0	1	0	0	1	1	1	1	Aldo/keto	reductase	family
Ald_Xan_dh_C2	PF02738.13	gi|15922820|ref|NP_378489.1|	-	2.5e-103	346.2	0.0	1.9e-79	267.4	0.0	2.1	1	1	0	2	2	2	2	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|15922820|ref|NP_378489.1|	-	7.7e-15	54.9	0.0	1.7e-14	53.8	0.0	1.6	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
Nairo_nucleo	PF02477.10	gi|15922820|ref|NP_378489.1|	-	0.1	11.2	0.0	0.16	10.5	0.0	1.2	1	0	0	1	1	1	0	Nucleocapsid	N	protein
Arch_ATPase	PF01637.13	gi|15922821|ref|NP_378490.1|	-	2.7e-31	109.0	3.0	3.3e-31	108.7	2.1	1.1	1	0	0	1	1	1	1	Archaeal	ATPase
AAA_14	PF13173.1	gi|15922821|ref|NP_378490.1|	-	2.4e-08	33.9	3.7	3.4e-06	26.9	1.2	2.5	2	1	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|15922821|ref|NP_378490.1|	-	6.6e-06	26.2	0.1	1.1e-05	25.5	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|15922821|ref|NP_378490.1|	-	0.0002	21.5	0.1	0.0013	18.9	0.1	2.0	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_35	PF14516.1	gi|15922821|ref|NP_378490.1|	-	0.00053	18.7	0.0	0.0045	15.6	0.0	2.0	1	1	0	1	1	1	1	AAA-like	domain
Sda	PF08970.5	gi|15922821|ref|NP_378490.1|	-	0.06	12.8	0.3	0.15	11.5	0.2	1.6	1	0	0	1	1	1	0	Sporulation	inhibitor	A
Miro	PF08477.8	gi|15922821|ref|NP_378490.1|	-	0.088	13.3	0.0	0.17	12.3	0.0	1.6	1	1	0	1	1	1	0	Miro-like	protein
Pro-kuma_activ	PF09286.6	gi|15922823|ref|NP_378492.1|	-	3.9e-22	78.8	0.1	8.2e-22	77.7	0.1	1.5	1	0	0	1	1	1	1	Pro-kumamolisin,	activation	domain
Peptidase_S8	PF00082.17	gi|15922823|ref|NP_378492.1|	-	2.9e-11	43.0	1.4	2.9e-11	43.0	0.9	1.9	2	0	0	2	2	2	1	Subtilase	family
ChitinaseA_N	PF08329.5	gi|15922823|ref|NP_378492.1|	-	0.011	15.5	0.1	0.025	14.3	0.1	1.6	1	0	0	1	1	1	0	Chitinase	A,	N-terminal	domain
A2M_N	PF01835.14	gi|15922823|ref|NP_378492.1|	-	0.029	14.6	0.0	0.3	11.3	0.0	2.7	3	0	0	3	3	3	0	MG2	domain
Gmad2	PF10648.4	gi|15922823|ref|NP_378492.1|	-	0.068	13.3	1.1	15	5.7	0.1	2.9	2	0	0	2	2	2	0	Immunoglobulin-like	domain	of	bacterial	spore	germination
HEPN	PF05168.9	gi|15922824|ref|NP_378493.1|	-	4.6e-35	120.0	0.8	5.5e-35	119.7	0.5	1.1	1	0	0	1	1	1	1	HEPN	domain
FAM195	PF14799.1	gi|15922824|ref|NP_378493.1|	-	0.0017	18.2	0.9	0.0025	17.6	0.7	1.3	1	0	0	1	1	1	1	FAM195	family
HMG_box_2	PF09011.5	gi|15922824|ref|NP_378493.1|	-	0.094	13.0	1.2	0.094	13.0	0.8	1.9	2	0	0	2	2	2	0	HMG-box	domain
SNARE_assoc	PF09335.6	gi|15922825|ref|NP_378494.1|	-	9e-21	74.3	7.5	9e-21	74.3	5.2	1.9	2	0	0	2	2	2	1	SNARE	associated	Golgi	protein
Resolvase	PF00239.16	gi|15922826|ref|NP_378495.1|	-	1.5e-21	76.7	0.6	1.9e-21	76.3	0.4	1.1	1	0	0	1	1	1	1	Resolvase,	N	terminal	domain
HTH_17	PF12728.2	gi|15922826|ref|NP_378495.1|	-	3.4e-13	49.6	0.1	3.4e-13	49.6	0.1	2.8	4	0	0	4	4	4	1	Helix-turn-helix	domain
DUF1323	PF07037.6	gi|15922826|ref|NP_378495.1|	-	0.00074	19.6	0.2	0.0023	18.0	0.1	2.0	1	1	0	1	1	1	1	Putative	transcription	regulator	(DUF1323)
MerR_1	PF13411.1	gi|15922826|ref|NP_378495.1|	-	0.002	17.8	0.2	0.0062	16.2	0.0	2.0	2	1	0	2	2	2	1	MerR	HTH	family	regulatory	protein
MerR	PF00376.18	gi|15922826|ref|NP_378495.1|	-	0.0025	17.3	0.0	0.0053	16.2	0.0	1.6	1	0	0	1	1	1	1	MerR	family	regulatory	protein
HTH_28	PF13518.1	gi|15922826|ref|NP_378495.1|	-	0.008	16.1	2.3	0.082	12.9	0.1	3.0	3	0	0	3	3	3	1	Helix-turn-helix	domain
Clp1	PF06807.9	gi|15922826|ref|NP_378495.1|	-	0.0096	15.7	0.2	0.042	13.6	0.0	2.0	1	1	2	3	3	3	1	Pre-mRNA	cleavage	complex	II	protein	Clp1
HTH_23	PF13384.1	gi|15922826|ref|NP_378495.1|	-	0.0099	15.5	0.1	0.18	11.5	0.0	2.7	2	0	0	2	2	2	1	Homeodomain-like	domain
HTH_37	PF13744.1	gi|15922826|ref|NP_378495.1|	-	0.011	15.5	0.0	1.4	8.7	0.0	2.5	2	0	0	2	2	2	0	Helix-turn-helix	domain
TFIID_20kDa	PF03847.8	gi|15922826|ref|NP_378495.1|	-	0.022	15.0	0.2	0.057	13.7	0.1	1.8	2	0	0	2	2	1	0	Transcription	initiation	factor	TFIID	subunit	A
NYN	PF01936.13	gi|15922826|ref|NP_378495.1|	-	0.042	14.1	0.1	0.068	13.4	0.1	1.3	1	0	0	1	1	1	0	NYN	domain
HTH_3	PF01381.17	gi|15922826|ref|NP_378495.1|	-	0.05	13.4	0.2	0.52	10.1	0.0	2.5	3	0	0	3	3	3	0	Helix-turn-helix
CHIPS	PF11434.3	gi|15922827|ref|NP_378496.1|	-	0.024	14.2	0.2	0.13	11.8	0.0	2.2	3	0	0	3	3	3	0	Chemotaxis-inhibiting	protein	CHIPS
OrfB_Zn_ribbon	PF07282.6	gi|15922828|ref|NP_378497.1|	-	0.061	12.9	0.1	0.7	9.5	0.0	2.6	3	1	0	3	3	3	0	Putative	transposase	DNA-binding	domain
Phage_integrase	PF00589.17	gi|15922829|ref|NP_378498.1|	-	3.4e-16	59.4	0.1	1.9e-15	56.9	0.0	2.1	2	0	0	2	2	2	1	Phage	integrase	family
HTH_3	PF01381.17	gi|15922829|ref|NP_378498.1|	-	5.1e-06	26.2	1.2	1.4e-05	24.8	0.1	2.4	3	0	0	3	3	3	1	Helix-turn-helix
HTH_26	PF13443.1	gi|15922829|ref|NP_378498.1|	-	0.00049	20.2	0.0	0.002	18.2	0.0	2.1	1	0	0	1	1	1	1	Cro/C1-type	HTH	DNA-binding	domain
HTH_19	PF12844.2	gi|15922829|ref|NP_378498.1|	-	0.0006	19.8	0.1	0.0026	17.7	0.1	2.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
Sigma54_DBD	PF04552.8	gi|15922829|ref|NP_378498.1|	-	0.0038	16.7	0.8	0.18	11.3	0.0	3.2	4	1	0	4	4	4	1	Sigma-54,	DNA	binding	domain
HTH_23	PF13384.1	gi|15922829|ref|NP_378498.1|	-	0.018	14.6	0.0	0.061	13.0	0.0	1.9	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_31	PF13560.1	gi|15922829|ref|NP_378498.1|	-	0.028	14.6	0.0	0.29	11.3	0.0	2.5	3	0	0	3	3	3	0	Helix-turn-helix	domain
DUF2540	PF10802.3	gi|15922831|ref|NP_378500.1|	-	0.0072	15.9	0.8	0.32	10.7	0.1	2.4	2	1	0	2	2	2	2	Protein	of	unknown	function	(DUF2540)
RHH_1	PF01402.16	gi|15922831|ref|NP_378500.1|	-	0.08	12.8	0.0	0.16	11.9	0.0	1.5	1	0	0	1	1	1	0	Ribbon-helix-helix	protein,	copG	family
DUF4393	PF14337.1	gi|15922831|ref|NP_378500.1|	-	0.093	12.1	0.5	0.11	11.8	0.3	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4393)
THDPS_N_2	PF14805.1	gi|15922832|ref|NP_378501.1|	-	0.0046	16.7	0.1	0.0055	16.5	0.1	1.1	1	0	0	1	1	1	1	Tetrahydrodipicolinate	N-succinyltransferase	N-terminal
RHH_1	PF01402.16	gi|15922833|ref|NP_378502.1|	-	4e-11	42.3	0.3	4.8e-11	42.0	0.2	1.1	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
RepB-RCR_reg	PF10723.4	gi|15922833|ref|NP_378502.1|	-	0.091	12.5	0.0	0.1	12.3	0.0	1.1	1	0	0	1	1	1	0	Replication	regulatory	protein	RepB
DUF3408	PF11888.3	gi|15922833|ref|NP_378502.1|	-	0.11	12.4	0.0	0.12	12.2	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3408)
PDDEXK_1	PF12705.2	gi|15922834|ref|NP_378503.1|	-	5.7e-13	48.8	0.2	2e-10	40.4	0.0	2.1	1	1	1	2	2	2	2	PD-(D/E)XK	nuclease	superfamily
Cas_Cas4	PF01930.12	gi|15922834|ref|NP_378503.1|	-	1.2e-06	28.5	0.1	3.8e-06	26.9	0.1	1.7	1	1	0	1	1	1	1	Domain	of	unknown	function	DUF83
Exo5	PF09810.4	gi|15922834|ref|NP_378503.1|	-	0.029	13.5	5.5	4.2	6.5	1.0	3.0	2	1	1	3	3	3	0	Exonuclease	V	-	a	5'	deoxyribonuclease
Rhodopsin_N	PF10413.4	gi|15922836|ref|NP_378505.1|	-	0.018	14.7	0.7	0.031	13.9	0.5	1.4	1	0	0	1	1	1	0	Amino	terminal	of	the	G-protein	receptor	rhodopsin
DUF3834	PF12916.2	gi|15922839|ref|NP_378508.1|	-	1.2e-71	239.9	0.1	1.3e-71	239.7	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3834)
Creatininase	PF02633.9	gi|15922840|ref|NP_378509.1|	-	6.4e-47	159.6	0.0	7.5e-47	159.3	0.0	1.0	1	0	0	1	1	1	1	Creatinine	amidohydrolase
HTH_45	PF14947.1	gi|15922841|ref|NP_378510.1|	-	2.7e-07	30.2	0.5	3.3e-07	30.0	0.4	1.2	1	1	0	1	1	1	1	Winged	helix-turn-helix
HTH_24	PF13412.1	gi|15922841|ref|NP_378510.1|	-	6.1e-06	25.5	1.9	8.2e-06	25.1	1.3	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_34	PF13601.1	gi|15922841|ref|NP_378510.1|	-	7.2e-06	25.9	0.2	2e-05	24.5	0.1	1.7	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_27	PF13463.1	gi|15922841|ref|NP_378510.1|	-	3.3e-05	24.1	0.0	3.9e-05	23.9	0.0	1.1	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_12	PF08461.5	gi|15922841|ref|NP_378510.1|	-	5.7e-05	22.7	0.3	8.6e-05	22.1	0.2	1.3	1	1	0	1	1	1	1	Ribonuclease	R	winged-helix	domain
HTH_11	PF08279.7	gi|15922841|ref|NP_378510.1|	-	7.7e-05	22.2	0.3	0.00011	21.7	0.2	1.1	1	0	0	1	1	1	1	HTH	domain
Rrf2	PF02082.15	gi|15922841|ref|NP_378510.1|	-	0.00028	20.9	0.0	0.00033	20.7	0.0	1.1	1	0	0	1	1	1	1	Transcriptional	regulator
TrmB	PF01978.14	gi|15922841|ref|NP_378510.1|	-	0.00051	19.7	0.1	0.00052	19.6	0.1	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
DUF1803	PF08820.5	gi|15922841|ref|NP_378510.1|	-	0.00051	19.6	0.2	0.00061	19.4	0.1	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1803)
MarR_2	PF12802.2	gi|15922841|ref|NP_378510.1|	-	0.00058	19.4	0.0	0.00071	19.2	0.0	1.1	1	0	0	1	1	1	1	MarR	family
HxlR	PF01638.12	gi|15922841|ref|NP_378510.1|	-	0.0015	18.1	0.2	0.0035	16.9	0.1	1.6	1	1	0	1	1	1	1	HxlR-like	helix-turn-helix
Mrr_N	PF14338.1	gi|15922841|ref|NP_378510.1|	-	0.0019	18.2	0.5	0.0074	16.3	0.4	1.9	1	1	0	1	1	1	1	Mrr	N-terminal	domain
HemN_C	PF06969.11	gi|15922841|ref|NP_378510.1|	-	0.0019	18.2	0.1	0.0025	17.8	0.0	1.2	1	0	0	1	1	1	1	HemN	C-terminal	domain
FaeA	PF04703.7	gi|15922841|ref|NP_378510.1|	-	0.0023	18.0	0.0	0.0027	17.8	0.0	1.1	1	0	0	1	1	1	1	FaeA-like	protein
HTH_DeoR	PF08220.7	gi|15922841|ref|NP_378510.1|	-	0.0037	16.7	0.0	0.0047	16.4	0.0	1.2	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
HTH_20	PF12840.2	gi|15922841|ref|NP_378510.1|	-	0.0052	16.5	0.0	0.006	16.3	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
FeoC	PF09012.5	gi|15922841|ref|NP_378510.1|	-	0.0065	16.1	0.0	0.0074	15.9	0.0	1.3	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
RPA_C	PF08784.6	gi|15922841|ref|NP_378510.1|	-	0.0073	16.6	0.0	0.01	16.2	0.0	1.1	1	0	0	1	1	1	1	Replication	protein	A	C	terminal
EAP30	PF04157.11	gi|15922841|ref|NP_378510.1|	-	0.0079	15.3	0.0	0.0092	15.1	0.0	1.0	1	0	0	1	1	1	1	EAP30/Vps36	family
DUF4364	PF14277.1	gi|15922841|ref|NP_378510.1|	-	0.012	15.2	0.2	0.016	14.8	0.1	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4364)
RuvB_C	PF05491.8	gi|15922841|ref|NP_378510.1|	-	0.015	14.9	0.1	0.017	14.7	0.1	1.1	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	ruvB	C-terminus
DUF4423	PF14394.1	gi|15922841|ref|NP_378510.1|	-	0.019	14.5	0.2	0.02	14.4	0.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
PCI	PF01399.22	gi|15922841|ref|NP_378510.1|	-	0.024	14.9	0.2	0.031	14.5	0.2	1.1	1	0	0	1	1	1	0	PCI	domain
MarR	PF01047.17	gi|15922841|ref|NP_378510.1|	-	0.024	14.3	0.1	0.028	14.1	0.1	1.2	1	0	0	1	1	1	0	MarR	family
TBPIP	PF07106.8	gi|15922841|ref|NP_378510.1|	-	0.026	14.0	0.3	0.027	14.0	0.2	1.1	1	0	0	1	1	1	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
RNA_pol_Rpc34	PF05158.7	gi|15922841|ref|NP_378510.1|	-	0.027	13.6	0.2	0.028	13.6	0.1	1.0	1	0	0	1	1	1	0	RNA	polymerase	Rpc34	subunit
HTH_Crp_2	PF13545.1	gi|15922841|ref|NP_378510.1|	-	0.027	14.2	0.1	0.034	13.9	0.1	1.4	1	1	0	1	1	1	0	Crp-like	helix-turn-helix	domain
DUF505	PF04458.7	gi|15922841|ref|NP_378510.1|	-	0.03	12.4	0.1	0.03	12.4	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF505)
Cullin	PF00888.17	gi|15922841|ref|NP_378510.1|	-	0.046	12.2	0.1	0.049	12.1	0.1	1.0	1	0	0	1	1	1	0	Cullin	family
HTH_5	PF01022.15	gi|15922841|ref|NP_378510.1|	-	0.053	13.2	0.1	0.066	12.8	0.0	1.2	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
PadR	PF03551.9	gi|15922841|ref|NP_378510.1|	-	0.056	13.2	0.2	0.096	12.4	0.2	1.7	1	1	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
DUF603	PF04645.7	gi|15922841|ref|NP_378510.1|	-	0.066	13.1	0.9	0.068	13.1	0.6	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF603
Methyltransf_7	PF03492.10	gi|15922841|ref|NP_378510.1|	-	0.069	11.8	0.0	0.073	11.8	0.0	1.1	1	0	0	1	1	1	0	SAM	dependent	carboxyl	methyltransferase
DUF2250	PF10007.4	gi|15922841|ref|NP_378510.1|	-	0.07	13.0	0.4	0.11	12.4	0.3	1.5	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF999	PF06198.6	gi|15922841|ref|NP_378510.1|	-	0.09	12.5	0.1	0.09	12.5	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF999)
Cullin_Nedd8	PF10557.4	gi|15922841|ref|NP_378510.1|	-	0.14	12.0	0.7	0.2	11.4	0.2	1.5	1	1	0	1	1	1	0	Cullin	protein	neddylation	domain
Isochorismatase	PF00857.15	gi|15922842|ref|NP_378511.1|	-	8.6e-35	120.2	0.0	1e-34	119.9	0.0	1.0	1	0	0	1	1	1	1	Isochorismatase	family
ABC_tran	PF00005.22	gi|15922843|ref|NP_378512.1|	-	1.3e-26	93.4	0.0	1.8e-26	93.0	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|15922843|ref|NP_378512.1|	-	2.1e-14	54.1	2.6	9.5e-08	32.3	0.2	2.1	1	1	1	2	2	2	2	AAA	domain
AAA_29	PF13555.1	gi|15922843|ref|NP_378512.1|	-	4.1e-05	23.0	0.0	7.7e-05	22.1	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|15922843|ref|NP_378512.1|	-	0.00019	21.8	0.0	0.00024	21.4	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|15922843|ref|NP_378512.1|	-	0.00022	20.4	0.9	0.014	14.5	0.1	2.1	1	1	0	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|15922843|ref|NP_378512.1|	-	0.0036	16.5	0.5	2	7.5	0.1	2.2	1	1	1	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_19	PF13245.1	gi|15922843|ref|NP_378512.1|	-	0.045	13.5	0.0	0.081	12.6	0.0	1.4	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_30	PF13604.1	gi|15922843|ref|NP_378512.1|	-	0.071	12.6	0.0	0.12	11.9	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
AAA_14	PF13173.1	gi|15922843|ref|NP_378512.1|	-	0.095	12.5	0.1	1.6	8.6	0.0	2.3	1	1	1	2	2	2	0	AAA	domain
DLH	PF01738.13	gi|15922845|ref|NP_378514.1|	-	1.3e-70	237.0	0.0	2.1e-70	236.3	0.0	1.3	1	1	0	1	1	1	1	Dienelactone	hydrolase	family
Abhydrolase_5	PF12695.2	gi|15922845|ref|NP_378514.1|	-	3.5e-10	39.8	0.0	6.8e-10	38.8	0.0	1.5	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_2	PF02230.11	gi|15922845|ref|NP_378514.1|	-	6.5e-05	22.4	0.0	0.00013	21.5	0.0	1.4	2	0	0	2	2	2	1	Phospholipase/Carboxylesterase
Abhydrolase_6	PF12697.2	gi|15922845|ref|NP_378514.1|	-	0.00012	22.0	0.0	0.12	12.2	0.0	2.3	1	1	1	2	2	2	2	Alpha/beta	hydrolase	family
Peptidase_S9	PF00326.16	gi|15922845|ref|NP_378514.1|	-	0.0013	17.9	0.0	1	8.5	0.0	2.2	2	0	0	2	2	2	2	Prolyl	oligopeptidase	family
BAAT_C	PF08840.6	gi|15922845|ref|NP_378514.1|	-	0.029	14.0	0.2	6.7	6.3	0.0	2.6	2	1	0	2	2	2	0	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
Abhydrolase_1	PF00561.15	gi|15922845|ref|NP_378514.1|	-	0.055	13.0	0.1	0.14	11.7	0.0	1.6	2	0	0	2	2	2	0	alpha/beta	hydrolase	fold
DUF3581	PF12119.3	gi|15922845|ref|NP_378514.1|	-	0.056	12.6	0.0	0.087	12.0	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3581)
DUF3530	PF12048.3	gi|15922845|ref|NP_378514.1|	-	0.061	12.2	0.0	0.075	12.0	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3530)
Abhydrolase_3	PF07859.8	gi|15922845|ref|NP_378514.1|	-	0.081	12.4	0.0	1.6	8.2	0.0	2.3	1	1	0	2	2	2	0	alpha/beta	hydrolase	fold
Chlorophyllase2	PF12740.2	gi|15922845|ref|NP_378514.1|	-	0.11	11.3	0.0	0.23	10.3	0.0	1.5	2	0	0	2	2	2	0	Chlorophyllase	enzyme
RHH_1	PF01402.16	gi|15922846|ref|NP_378515.1|	-	1.8e-09	37.0	0.0	8.2e-09	34.9	0.0	1.9	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
KN_motif	PF12075.3	gi|15922846|ref|NP_378515.1|	-	0.069	12.9	0.1	0.19	11.5	0.1	1.8	1	0	0	1	1	1	0	KN	motif
CbiA	PF01656.18	gi|15922847|ref|NP_378516.1|	-	4.9e-07	29.3	0.0	8.2e-07	28.6	0.0	1.3	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.1	gi|15922847|ref|NP_378516.1|	-	4.2e-05	23.5	0.1	0.00083	19.3	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
ArsA_ATPase	PF02374.10	gi|15922847|ref|NP_378516.1|	-	0.00018	20.6	0.1	0.014	14.4	0.0	2.4	2	1	0	2	2	2	2	Anion-transporting	ATPase
AAA_17	PF13207.1	gi|15922847|ref|NP_378516.1|	-	0.031	15.1	0.0	0.11	13.2	0.0	2.1	1	1	0	1	1	1	0	AAA	domain
HTH_24	PF13412.1	gi|15922849|ref|NP_378518.1|	-	1.5e-11	43.4	0.8	4.5e-07	29.1	0.1	2.8	3	0	0	3	3	3	2	Winged	helix-turn-helix	DNA-binding
HTH_45	PF14947.1	gi|15922849|ref|NP_378518.1|	-	6.9e-09	35.4	7.6	8.2e-07	28.7	0.3	2.8	2	1	0	2	2	2	2	Winged	helix-turn-helix
TrmB	PF01978.14	gi|15922849|ref|NP_378518.1|	-	9.5e-08	31.6	0.1	2.7e-05	23.7	0.0	2.4	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|15922849|ref|NP_378518.1|	-	3.4e-07	29.8	0.0	7.6e-05	22.3	0.0	2.5	3	0	0	3	3	2	1	MarR	family
HTH_11	PF08279.7	gi|15922849|ref|NP_378518.1|	-	5.4e-06	25.9	0.4	0.0059	16.2	0.1	2.8	2	1	0	2	2	2	2	HTH	domain
MarR	PF01047.17	gi|15922849|ref|NP_378518.1|	-	1.6e-05	24.4	0.1	9.6e-05	22.0	0.0	2.2	2	1	0	2	2	2	1	MarR	family
HTH_27	PF13463.1	gi|15922849|ref|NP_378518.1|	-	2.1e-05	24.7	0.0	0.00014	22.1	0.0	2.1	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
UPF0122	PF04297.9	gi|15922849|ref|NP_378518.1|	-	6.8e-05	22.8	0.4	0.00017	21.5	0.2	1.6	1	0	0	1	1	1	1	Putative	helix-turn-helix	protein,	YlxM	/	p13	like
HTH_20	PF12840.2	gi|15922849|ref|NP_378518.1|	-	0.00021	20.9	0.0	0.015	15.1	0.0	2.3	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_36	PF13730.1	gi|15922849|ref|NP_378518.1|	-	0.00035	20.6	0.1	0.022	14.8	0.0	2.5	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_Mga	PF08280.6	gi|15922849|ref|NP_378518.1|	-	0.00037	20.2	0.2	0.78	9.5	0.0	2.8	2	0	0	2	2	2	2	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_28	PF13518.1	gi|15922849|ref|NP_378518.1|	-	0.00046	20.1	0.0	0.09	12.8	0.0	2.3	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|15922849|ref|NP_378518.1|	-	0.0005	19.6	0.0	0.0034	17.0	0.0	2.2	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HxlR	PF01638.12	gi|15922849|ref|NP_378518.1|	-	0.00086	18.8	0.1	0.066	12.8	0.0	2.4	2	0	0	2	2	2	1	HxlR-like	helix-turn-helix
HTH_23	PF13384.1	gi|15922849|ref|NP_378518.1|	-	0.0009	18.8	0.0	0.034	13.7	0.0	2.3	2	0	0	2	2	2	1	Homeodomain-like	domain
HTH_29	PF13551.1	gi|15922849|ref|NP_378518.1|	-	0.0012	18.9	0.0	0.57	10.3	0.0	2.2	2	0	0	2	2	2	1	Winged	helix-turn	helix
HTH_AsnC-type	PF13404.1	gi|15922849|ref|NP_378518.1|	-	0.0014	18.0	0.0	0.091	12.3	0.0	2.3	2	0	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
B-block_TFIIIC	PF04182.7	gi|15922849|ref|NP_378518.1|	-	0.002	17.9	0.7	0.0071	16.1	0.0	2.3	2	1	1	3	3	2	1	B-block	binding	subunit	of	TFIIIC
MotA_activ	PF09114.5	gi|15922849|ref|NP_378518.1|	-	0.0026	17.4	0.7	0.031	14.0	0.1	2.4	2	1	0	2	2	2	1	Transcription	factor	MotA,	activation	domain
FeoC	PF09012.5	gi|15922849|ref|NP_378518.1|	-	0.0029	17.2	0.0	0.13	12.0	0.0	2.2	2	0	0	2	2	2	1	FeoC	like	transcriptional	regulator
Rrf2	PF02082.15	gi|15922849|ref|NP_378518.1|	-	0.0096	16.0	0.1	0.077	13.1	0.0	2.4	2	0	0	2	2	2	1	Transcriptional	regulator
GntR	PF00392.16	gi|15922849|ref|NP_378518.1|	-	0.011	15.2	0.1	0.42	10.0	0.0	2.3	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
RepL	PF05732.6	gi|15922849|ref|NP_378518.1|	-	0.015	14.4	0.7	4.2	6.5	0.0	2.2	1	1	1	2	2	2	0	Firmicute	plasmid	replication	protein	(RepL)
HTH_10	PF04967.7	gi|15922849|ref|NP_378518.1|	-	0.017	14.7	0.1	0.81	9.3	0.0	2.4	2	0	0	2	2	2	0	HTH	DNA	binding	domain
HTH_17	PF12728.2	gi|15922849|ref|NP_378518.1|	-	0.027	14.6	0.2	0.39	11.0	0.0	2.4	2	0	0	2	2	2	0	Helix-turn-helix	domain
MerR_1	PF13411.1	gi|15922849|ref|NP_378518.1|	-	0.041	13.6	0.1	0.14	11.9	0.0	2.0	2	1	0	2	2	2	0	MerR	HTH	family	regulatory	protein
HTH_DeoR	PF08220.7	gi|15922849|ref|NP_378518.1|	-	0.065	12.7	0.0	4	7.0	0.0	2.5	2	0	0	2	2	2	0	DeoR-like	helix-turn-helix	domain
FaeA	PF04703.7	gi|15922849|ref|NP_378518.1|	-	0.068	13.3	0.0	3.6	7.8	0.0	2.6	2	0	0	2	2	2	0	FaeA-like	protein
HTH_7	PF02796.10	gi|15922849|ref|NP_378518.1|	-	0.07	13.0	0.2	8.9	6.2	0.0	2.5	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	resolvase
Phage_pRha	PF09669.5	gi|15922849|ref|NP_378518.1|	-	0.079	13.3	2.0	0.21	11.9	0.3	2.3	2	1	0	2	2	2	0	Phage	regulatory	protein	Rha	(Phage_pRha)
Rio2_N	PF09202.6	gi|15922849|ref|NP_378518.1|	-	0.079	13.0	0.1	3.2	7.8	0.0	2.3	2	0	0	2	2	2	0	Rio2,	N-terminal
MerR	PF00376.18	gi|15922849|ref|NP_378518.1|	-	0.083	12.4	0.0	0.24	11.0	0.0	1.7	1	0	0	1	1	1	0	MerR	family	regulatory	protein
Fe_dep_repress	PF01325.14	gi|15922849|ref|NP_378518.1|	-	0.12	12.3	0.7	2.3	8.2	0.1	2.7	2	1	1	3	3	3	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Arch_flagellin	PF01917.11	gi|15922853|ref|NP_378522.1|	-	9.8e-18	64.4	6.1	4.6e-17	62.2	2.9	2.0	2	0	0	2	2	2	1	Archaebacterial	flagellin
DUF4190	PF13828.1	gi|15922853|ref|NP_378522.1|	-	0.92	9.0	6.8	0.7	9.4	1.2	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4190)
Arch_flagellin	PF01917.11	gi|15922855|ref|NP_378524.1|	-	1.1e-08	34.9	8.0	1.7e-07	31.0	5.5	1.9	1	1	0	1	1	1	1	Archaebacterial	flagellin
Seipin	PF06775.9	gi|15922855|ref|NP_378524.1|	-	0.019	14.4	0.3	0.037	13.5	0.2	1.6	1	1	0	1	1	1	0	Putative	adipose-regulatory	protein	(Seipin)
DoxA	PF07680.6	gi|15922855|ref|NP_378524.1|	-	0.027	14.0	0.3	0.04	13.5	0.2	1.4	1	1	0	1	1	1	0	TQO	small	subunit	DoxA
Big_5	PF13205.1	gi|15922855|ref|NP_378524.1|	-	0.26	11.9	2.9	2.9	8.5	2.0	2.1	1	1	0	1	1	1	0	Bacterial	Ig-like	domain
Cna_B	PF05738.8	gi|15922855|ref|NP_378524.1|	-	4.9	6.9	7.7	62	3.4	5.3	2.8	1	1	0	1	1	1	0	Cna	protein	B-type	domain
DUF1628	PF07790.6	gi|15922855|ref|NP_378524.1|	-	6.6	7.5	9.4	54	4.6	6.5	2.2	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1628)
KaiC	PF06745.8	gi|15922857|ref|NP_378526.1|	-	3.5e-16	59.0	0.6	4.3e-16	58.7	0.4	1.0	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.1	gi|15922857|ref|NP_378526.1|	-	1.7e-05	24.3	0.1	6.1e-05	22.5	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_5	PF07728.9	gi|15922857|ref|NP_378526.1|	-	0.0011	18.6	0.0	0.0021	17.8	0.0	1.4	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
DUF2075	PF09848.4	gi|15922857|ref|NP_378526.1|	-	0.0014	17.6	0.2	0.0021	17.0	0.1	1.5	1	1	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
PAXNEB	PF05625.6	gi|15922857|ref|NP_378526.1|	-	0.0018	17.1	2.1	0.61	8.8	0.0	2.1	1	1	1	2	2	2	2	PAXNEB	protein
Arch_ATPase	PF01637.13	gi|15922857|ref|NP_378526.1|	-	0.002	17.8	0.1	0.0028	17.3	0.1	1.1	1	0	0	1	1	1	1	Archaeal	ATPase
NACHT	PF05729.7	gi|15922857|ref|NP_378526.1|	-	0.0022	17.6	0.7	0.0062	16.2	0.5	1.7	1	1	0	1	1	1	1	NACHT	domain
DUF835	PF05763.7	gi|15922857|ref|NP_378526.1|	-	0.003	17.1	0.9	0.0062	16.0	0.6	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF835)
AAA_24	PF13479.1	gi|15922857|ref|NP_378526.1|	-	0.013	15.1	0.1	0.028	14.0	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
DnaB_C	PF03796.10	gi|15922857|ref|NP_378526.1|	-	0.018	13.9	0.4	0.12	11.2	0.0	2.0	2	0	0	2	2	2	0	DnaB-like	helicase	C	terminal	domain
RNA_helicase	PF00910.17	gi|15922857|ref|NP_378526.1|	-	0.018	15.2	0.0	0.033	14.3	0.0	1.4	1	0	0	1	1	1	0	RNA	helicase
AAA_10	PF12846.2	gi|15922857|ref|NP_378526.1|	-	0.041	13.3	0.1	0.052	12.9	0.0	1.3	1	1	0	1	1	1	0	AAA-like	domain
Sigma54_activat	PF00158.21	gi|15922857|ref|NP_378526.1|	-	0.043	13.3	0.0	0.086	12.3	0.0	1.5	1	0	0	1	1	1	0	Sigma-54	interaction	domain
AAA_18	PF13238.1	gi|15922857|ref|NP_378526.1|	-	0.048	13.9	1.2	0.11	12.8	0.9	1.6	1	1	0	1	1	1	0	AAA	domain
AAA_23	PF13476.1	gi|15922857|ref|NP_378526.1|	-	0.05	13.9	0.1	0.066	13.5	0.1	1.2	1	0	0	1	1	1	0	AAA	domain
AAA_22	PF13401.1	gi|15922857|ref|NP_378526.1|	-	0.13	12.3	0.2	0.36	10.9	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_17	PF13207.1	gi|15922857|ref|NP_378526.1|	-	0.13	13.0	0.2	0.25	12.1	0.1	1.6	1	1	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|15922857|ref|NP_378526.1|	-	0.13	12.4	0.7	0.31	11.2	0.5	1.6	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
T2SE	PF00437.15	gi|15922858|ref|NP_378527.1|	-	5.9e-48	163.1	0.0	8.9e-48	162.5	0.0	1.2	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_29	PF13555.1	gi|15922858|ref|NP_378527.1|	-	0.0018	17.7	0.0	0.0037	16.7	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
ABC_tran	PF00005.22	gi|15922858|ref|NP_378527.1|	-	0.0025	18.1	0.0	0.037	14.3	0.0	2.5	3	0	0	3	3	3	1	ABC	transporter
FtsK_SpoIIIE	PF01580.13	gi|15922858|ref|NP_378527.1|	-	0.033	13.6	0.0	0.059	12.8	0.0	1.3	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
AAA_23	PF13476.1	gi|15922858|ref|NP_378527.1|	-	0.056	13.7	0.2	0.056	13.7	0.1	2.6	3	0	0	3	3	3	0	AAA	domain
AAA_22	PF13401.1	gi|15922858|ref|NP_378527.1|	-	0.11	12.6	0.0	0.29	11.2	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_16	PF13191.1	gi|15922858|ref|NP_378527.1|	-	0.19	11.6	0.0	0.33	10.9	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
T2SF	PF00482.18	gi|15922859|ref|NP_378528.1|	-	2.2e-10	40.5	11.9	1.9e-07	31.0	0.0	3.7	3	0	0	3	3	3	2	Type	II	secretion	system	(T2SS),	protein	F
DUF2516	PF10724.4	gi|15922859|ref|NP_378528.1|	-	0.017	15.0	2.2	0.017	15.0	1.5	2.9	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF2516)
PEPcase_2	PF14010.1	gi|15922859|ref|NP_378528.1|	-	0.034	12.4	0.1	0.053	11.8	0.1	1.2	1	0	0	1	1	1	0	Phosphoenolpyruvate	carboxylase
Arc_PepC_II	PF06847.6	gi|15922859|ref|NP_378528.1|	-	0.088	13.2	1.0	0.3	11.5	0.7	1.9	1	0	0	1	1	1	0	Archaeal	Peptidase	A24	C-terminus	Type	II
Glyco_hydro_31	PF01055.21	gi|15922861|ref|NP_378530.1|	-	6.4e-131	437.2	0.7	7.6e-131	436.9	0.5	1.1	1	0	0	1	1	1	1	Glycosyl	hydrolases	family	31
Gal_mutarotas_2	PF13802.1	gi|15922861|ref|NP_378530.1|	-	3.6e-17	61.9	0.1	1e-16	60.5	0.0	1.9	2	0	0	2	2	2	1	Galactose	mutarotase-like
DUF608	PF04685.8	gi|15922862|ref|NP_378531.1|	-	1.4e-94	316.8	0.5	2.1e-94	316.2	0.3	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF608
GBA2_N	PF12215.3	gi|15922862|ref|NP_378531.1|	-	7.7e-51	173.0	0.0	1.1e-50	172.5	0.0	1.2	1	0	0	1	1	1	1	beta-Glucocerebrosidase	2	N	terminal
Bac_rhamnosid	PF05592.6	gi|15922862|ref|NP_378531.1|	-	0.02	13.0	0.1	0.029	12.5	0.0	1.1	1	0	0	1	1	1	0	Bacterial	alpha-L-rhamnosidase
MFS_1	PF07690.11	gi|15922863|ref|NP_378532.1|	-	0.045	12.4	46.2	0.067	11.8	13.1	2.5	1	1	1	2	2	2	0	Major	Facilitator	Superfamily
DUF608	PF04685.8	gi|15922864|ref|NP_378533.1|	-	6e-106	354.2	0.5	8.6e-106	353.7	0.4	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF608
GBA2_N	PF12215.3	gi|15922864|ref|NP_378533.1|	-	1.9e-52	178.2	0.9	3.2e-52	177.5	0.6	1.4	1	0	0	1	1	1	1	beta-Glucocerebrosidase	2	N	terminal
DUF1776	PF08643.5	gi|15922865|ref|NP_378534.1|	-	0.00068	18.8	0.1	0.00079	18.6	0.1	1.1	1	0	0	1	1	1	1	Fungal	family	of	unknown	function	(DUF1776)
Kinesin-related	PF06548.6	gi|15922865|ref|NP_378534.1|	-	0.048	12.2	1.5	0.054	12.0	1.0	1.0	1	0	0	1	1	1	0	Kinesin-related
Cbl_N	PF02262.11	gi|15922865|ref|NP_378534.1|	-	0.35	10.5	5.1	0.22	11.2	2.1	1.6	2	0	0	2	2	2	0	CBL	proto-oncogene	N-terminal	domain	1
BPD_transp_1	PF00528.17	gi|15922866|ref|NP_378535.1|	-	6e-25	87.8	18.7	6e-25	87.8	13.0	2.0	2	0	0	2	2	2	2	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.2	gi|15922866|ref|NP_378535.1|	-	0.0031	16.8	2.7	0.0031	16.8	1.9	3.0	5	0	0	5	5	5	1	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
SBP_bac_5	PF00496.17	gi|15922868|ref|NP_378537.1|	-	5.6e-42	143.9	2.5	9.6e-42	143.1	1.8	1.4	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
Rifin_STEVOR	PF02009.11	gi|15922868|ref|NP_378537.1|	-	0.0041	16.8	0.9	0.006	16.2	0.6	1.2	1	0	0	1	1	1	1	Rifin/stevor	family
MtrF	PF09472.5	gi|15922868|ref|NP_378537.1|	-	1.4	8.2	6.0	3.5	6.9	4.2	1.7	1	0	0	1	1	1	0	Tetrahydromethanopterin	S-methyltransferase,	F	subunit	(MtrF)
DUF3827	PF12877.2	gi|15922868|ref|NP_378537.1|	-	7.2	4.5	5.6	9.5	4.1	3.9	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3827)
BPD_transp_1	PF00528.17	gi|15922869|ref|NP_378538.1|	-	1.1e-34	119.5	10.1	1.1e-34	119.5	7.0	2.4	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
Yip1	PF04893.12	gi|15922869|ref|NP_378538.1|	-	0.011	15.2	1.1	0.011	15.2	0.8	3.4	2	1	1	3	3	3	0	Yip1	domain
DUF3382	PF11862.3	gi|15922869|ref|NP_378538.1|	-	0.17	11.7	4.9	1.2	9.1	0.0	2.6	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF3382)
DUF3094	PF11293.3	gi|15922869|ref|NP_378538.1|	-	1.2	8.6	6.4	3.3	7.2	0.4	2.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3094)
ABC_tran	PF00005.22	gi|15922870|ref|NP_378539.1|	-	8e-32	110.4	0.0	1.2e-31	109.8	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|15922870|ref|NP_378539.1|	-	1.9e-16	60.1	0.0	3.4e-16	59.3	0.0	1.5	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|15922870|ref|NP_378539.1|	-	1.7e-13	51.2	7.5	1.2e-10	41.8	4.8	2.6	2	1	0	2	2	2	1	AAA	domain
AAA_18	PF13238.1	gi|15922870|ref|NP_378539.1|	-	3.5e-05	24.1	0.1	0.00012	22.4	0.1	1.8	2	0	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|15922870|ref|NP_378539.1|	-	8.3e-05	22.7	1.8	0.0012	18.9	1.2	2.1	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|15922870|ref|NP_378539.1|	-	0.00011	21.5	0.8	0.051	12.7	0.1	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_10	PF12846.2	gi|15922870|ref|NP_378539.1|	-	0.00014	21.3	0.1	0.017	14.5	0.0	2.6	1	1	0	2	2	2	1	AAA-like	domain
AAA_16	PF13191.1	gi|15922870|ref|NP_378539.1|	-	0.00015	21.8	0.1	0.00029	20.8	0.1	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_15	PF13175.1	gi|15922870|ref|NP_378539.1|	-	0.0002	20.5	2.9	0.031	13.3	0.1	2.2	1	1	0	2	2	2	2	AAA	ATPase	domain
MobB	PF03205.9	gi|15922870|ref|NP_378539.1|	-	0.00034	20.3	0.6	0.0031	17.2	0.4	2.2	1	1	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_29	PF13555.1	gi|15922870|ref|NP_378539.1|	-	0.00042	19.7	0.1	0.00082	18.8	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
IstB_IS21	PF01695.12	gi|15922870|ref|NP_378539.1|	-	0.00073	19.0	0.1	0.016	14.6	0.0	2.3	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
AAA_13	PF13166.1	gi|15922870|ref|NP_378539.1|	-	0.00076	18.0	0.8	0.63	8.4	0.1	2.3	2	1	0	2	2	2	2	AAA	domain
AAA_23	PF13476.1	gi|15922870|ref|NP_378539.1|	-	0.0011	19.3	0.0	0.0015	18.9	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
NB-ARC	PF00931.17	gi|15922870|ref|NP_378539.1|	-	0.0013	17.6	0.8	0.0049	15.7	0.1	1.9	2	1	0	2	2	2	1	NB-ARC	domain
AAA_25	PF13481.1	gi|15922870|ref|NP_378539.1|	-	0.0018	17.6	0.0	0.032	13.6	0.0	2.3	3	0	0	3	3	2	1	AAA	domain
AAA_17	PF13207.1	gi|15922870|ref|NP_378539.1|	-	0.002	18.9	0.3	0.0039	18.0	0.2	1.7	1	1	0	1	1	1	1	AAA	domain
DUF87	PF01935.12	gi|15922870|ref|NP_378539.1|	-	0.0032	17.3	1.1	0.0091	15.8	0.7	1.8	1	1	0	1	1	1	1	Domain	of	unknown	function	DUF87
NACHT	PF05729.7	gi|15922870|ref|NP_378539.1|	-	0.0056	16.3	1.1	0.0075	15.9	0.2	1.6	2	0	0	2	2	1	1	NACHT	domain
AAA	PF00004.24	gi|15922870|ref|NP_378539.1|	-	0.0057	16.8	0.2	0.01	16.0	0.1	1.7	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Arch_ATPase	PF01637.13	gi|15922870|ref|NP_378539.1|	-	0.0069	16.1	1.2	0.012	15.3	0.8	1.6	1	1	0	1	1	1	1	Archaeal	ATPase
UPF0079	PF02367.12	gi|15922870|ref|NP_378539.1|	-	0.0072	15.9	0.1	0.015	14.9	0.0	1.5	1	0	0	1	1	1	1	Uncharacterised	P-loop	hydrolase	UPF0079
T2SE	PF00437.15	gi|15922870|ref|NP_378539.1|	-	0.0094	14.8	0.1	0.025	13.5	0.0	1.7	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
GCD14	PF08704.5	gi|15922870|ref|NP_378539.1|	-	0.015	14.7	0.0	0.026	14.0	0.0	1.3	1	0	0	1	1	1	0	tRNA	methyltransferase	complex	GCD14	subunit
DUF258	PF03193.11	gi|15922870|ref|NP_378539.1|	-	0.017	14.3	0.0	0.029	13.5	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
ATP-synt_ab	PF00006.20	gi|15922870|ref|NP_378539.1|	-	0.02	14.3	0.0	0.033	13.7	0.0	1.3	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
KaiC	PF06745.8	gi|15922870|ref|NP_378539.1|	-	0.035	13.2	0.6	0.64	9.0	0.0	2.4	2	0	0	2	2	2	0	KaiC
ABC_ATPase	PF09818.4	gi|15922870|ref|NP_378539.1|	-	0.044	12.3	0.8	1.2	7.5	0.1	2.3	2	1	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
NTPase_1	PF03266.10	gi|15922870|ref|NP_378539.1|	-	0.045	13.4	1.0	0.07	12.8	0.2	1.7	2	0	0	2	2	1	0	NTPase
RNA_helicase	PF00910.17	gi|15922870|ref|NP_378539.1|	-	0.046	13.8	0.0	0.12	12.5	0.0	1.8	1	0	0	1	1	1	0	RNA	helicase
AAA_19	PF13245.1	gi|15922870|ref|NP_378539.1|	-	0.049	13.3	0.0	0.1	12.3	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|15922870|ref|NP_378539.1|	-	0.053	12.9	0.0	0.092	12.2	0.0	1.3	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
SbcCD_C	PF13558.1	gi|15922870|ref|NP_378539.1|	-	0.055	13.3	0.2	0.31	10.9	0.1	2.2	1	1	1	2	2	2	0	Putative	exonuclease	SbcCD,	C	subunit
PRK	PF00485.13	gi|15922870|ref|NP_378539.1|	-	0.063	12.8	0.0	0.098	12.2	0.0	1.3	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_14	PF13173.1	gi|15922870|ref|NP_378539.1|	-	0.095	12.6	0.3	0.36	10.7	0.1	2.0	1	1	1	2	2	2	0	AAA	domain
Miro	PF08477.8	gi|15922870|ref|NP_378539.1|	-	0.12	12.8	0.3	0.33	11.4	0.2	2.0	1	1	0	1	1	1	0	Miro-like	protein
MMR_HSR1	PF01926.18	gi|15922870|ref|NP_378539.1|	-	0.42	10.5	1.8	0.42	10.5	0.4	1.7	2	1	0	2	2	1	0	50S	ribosome-binding	GTPase
ABC_tran	PF00005.22	gi|15922871|ref|NP_378540.1|	-	1.4e-27	96.6	0.0	2.7e-27	95.7	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|15922871|ref|NP_378540.1|	-	2.9e-13	49.9	0.0	4.8e-13	49.2	0.0	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|15922871|ref|NP_378540.1|	-	1.3e-11	45.0	4.5	9.6e-06	25.7	0.0	2.7	1	1	2	3	3	3	2	AAA	domain
AAA_22	PF13401.1	gi|15922871|ref|NP_378540.1|	-	6.1e-05	23.1	1.2	0.0006	19.9	0.8	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_13	PF13166.1	gi|15922871|ref|NP_378540.1|	-	0.0003	19.4	0.5	0.062	11.7	0.0	2.4	2	1	0	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|15922871|ref|NP_378540.1|	-	0.00045	19.4	2.7	0.066	12.2	0.0	2.5	3	0	0	3	3	3	2	AAA	ATPase	domain
AAA_16	PF13191.1	gi|15922871|ref|NP_378540.1|	-	0.00085	19.3	0.0	0.0026	17.7	0.0	1.8	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_29	PF13555.1	gi|15922871|ref|NP_378540.1|	-	0.013	15.0	0.1	0.024	14.1	0.1	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
Myosin_head	PF00063.16	gi|15922871|ref|NP_378540.1|	-	0.03	12.3	0.0	0.043	11.8	0.0	1.1	1	0	0	1	1	1	0	Myosin	head	(motor	domain)
Arch_ATPase	PF01637.13	gi|15922871|ref|NP_378540.1|	-	0.061	13.0	1.0	0.14	11.8	0.7	1.8	1	1	0	1	1	1	0	Archaeal	ATPase
Gtr1_RagA	PF04670.7	gi|15922871|ref|NP_378540.1|	-	0.075	12.1	0.0	0.14	11.2	0.0	1.4	1	0	0	1	1	1	0	Gtr1/RagA	G	protein	conserved	region
AAA_10	PF12846.2	gi|15922871|ref|NP_378540.1|	-	0.19	11.1	0.3	0.69	9.2	0.2	1.8	2	0	0	2	2	2	0	AAA-like	domain
AAA_18	PF13238.1	gi|15922871|ref|NP_378540.1|	-	0.2	11.9	1.1	0.36	11.1	0.1	2.1	2	1	0	2	2	1	0	AAA	domain
DUF87	PF01935.12	gi|15922871|ref|NP_378540.1|	-	0.22	11.3	1.4	0.72	9.6	0.1	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF87
AAA	PF00004.24	gi|15922871|ref|NP_378540.1|	-	0.48	10.6	1.9	3	8.0	1.3	2.1	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF4480	PF13715.1	gi|15922872|ref|NP_378541.1|	-	0.083	12.9	0.5	1.6	8.8	0.1	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4480)
MacB_PCD	PF12704.2	gi|15922872|ref|NP_378541.1|	-	0.15	11.6	0.4	0.18	11.3	0.1	1.3	1	1	0	1	1	1	0	MacB-like	periplasmic	core	domain
YesK	PF14150.1	gi|15922872|ref|NP_378541.1|	-	0.2	11.8	8.0	0.74	9.9	0.7	2.3	2	0	0	2	2	2	0	YesK-like	protein
COPI_assoc	PF08507.5	gi|15922872|ref|NP_378541.1|	-	0.4	10.3	6.6	1.5	8.4	1.4	2.2	2	0	0	2	2	2	0	COPI	associated	protein
DUF4097	PF13349.1	gi|15922872|ref|NP_378541.1|	-	1.2	8.6	13.3	0.085	12.3	2.8	2.5	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4097)
DUF3955	PF13127.1	gi|15922872|ref|NP_378541.1|	-	2.3	7.8	8.1	7.7	6.1	0.9	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3955)
Gram_pos_anchor	PF00746.16	gi|15922872|ref|NP_378541.1|	-	4.1	7.3	5.3	0.86	9.4	0.1	2.1	2	0	0	2	2	2	0	Gram	positive	anchor
SBP_bac_5	PF00496.17	gi|15922873|ref|NP_378542.1|	-	1.8e-83	280.4	5.1	1.3e-64	218.3	1.7	2.6	2	1	1	3	3	3	2	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
Shisa	PF13908.1	gi|15922873|ref|NP_378542.1|	-	0.14	12.3	5.3	0.26	11.4	3.7	1.4	1	0	0	1	1	1	0	Wnt	and	FGF	inhibitory	regulator
OppC_N	PF12911.2	gi|15922873|ref|NP_378542.1|	-	0.26	10.7	7.6	0.023	14.0	0.9	2.5	2	0	0	2	2	2	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
Mucin	PF01456.12	gi|15922873|ref|NP_378542.1|	-	2	8.1	42.4	3.8	7.2	29.4	1.4	1	0	0	1	1	1	0	Mucin-like	glycoprotein
BPD_transp_1	PF00528.17	gi|15922874|ref|NP_378543.1|	-	2.4e-37	128.2	15.5	2.4e-37	128.2	10.7	2.2	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
FixQ	PF05545.6	gi|15922874|ref|NP_378543.1|	-	0.021	14.4	0.3	0.073	12.7	0.2	2.0	1	0	0	1	1	1	0	Cbb3-type	cytochrome	oxidase	component	FixQ
BPD_transp_1	PF00528.17	gi|15922875|ref|NP_378544.1|	-	1.8e-26	92.7	15.7	1.8e-26	92.7	10.9	2.4	2	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
ABC_tran	PF00005.22	gi|15922876|ref|NP_378545.1|	-	1.5e-27	96.5	0.0	2.2e-27	96.0	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|15922876|ref|NP_378545.1|	-	5.9e-20	71.3	0.0	1.1e-19	70.5	0.0	1.5	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|15922876|ref|NP_378545.1|	-	7.6e-13	49.0	2.7	4.6e-11	43.2	1.9	2.1	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|15922876|ref|NP_378545.1|	-	0.00017	20.9	1.8	0.0017	17.6	1.2	2.0	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|15922876|ref|NP_378545.1|	-	0.0003	20.2	0.0	0.00056	19.3	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.1	gi|15922876|ref|NP_378545.1|	-	0.00035	20.7	0.2	0.0012	18.9	0.1	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|15922876|ref|NP_378545.1|	-	0.0012	18.4	0.5	0.54	9.6	0.0	2.4	2	0	0	2	2	2	2	AAA-like	domain
MobB	PF03205.9	gi|15922876|ref|NP_378545.1|	-	0.0076	15.9	0.0	0.017	14.8	0.0	1.7	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_18	PF13238.1	gi|15922876|ref|NP_378545.1|	-	0.0083	16.4	1.3	0.062	13.6	0.3	2.4	1	1	0	2	2	2	1	AAA	domain
ABC_ATPase	PF09818.4	gi|15922876|ref|NP_378545.1|	-	0.0084	14.7	0.5	0.22	10.0	0.1	2.5	2	1	0	2	2	2	1	Predicted	ATPase	of	the	ABC	class
AAA_16	PF13191.1	gi|15922876|ref|NP_378545.1|	-	0.011	15.7	0.4	0.038	13.9	0.3	2.0	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_15	PF13175.1	gi|15922876|ref|NP_378545.1|	-	0.015	14.3	3.3	1.6	7.6	0.1	2.1	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_25	PF13481.1	gi|15922876|ref|NP_378545.1|	-	0.015	14.6	0.0	0.78	9.1	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
NACHT	PF05729.7	gi|15922876|ref|NP_378545.1|	-	0.081	12.5	0.0	0.15	11.7	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
AAA_17	PF13207.1	gi|15922876|ref|NP_378545.1|	-	0.084	13.6	1.1	0.19	12.5	0.8	1.8	1	1	0	1	1	1	0	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|15922876|ref|NP_378545.1|	-	0.11	11.9	0.1	0.23	10.8	0.1	1.5	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
PRK	PF00485.13	gi|15922876|ref|NP_378545.1|	-	0.11	12.0	0.0	0.19	11.3	0.0	1.4	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
DUF87	PF01935.12	gi|15922876|ref|NP_378545.1|	-	0.12	12.1	0.3	0.33	10.7	0.0	1.8	2	1	0	2	2	2	0	Domain	of	unknown	function	DUF87
ABC_tran	PF00005.22	gi|15922877|ref|NP_378546.1|	-	8.6e-34	116.7	0.0	1.2e-33	116.3	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|15922877|ref|NP_378546.1|	-	1.1e-21	76.9	0.1	1.8e-21	76.2	0.1	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|15922877|ref|NP_378546.1|	-	1.7e-12	47.9	0.5	9e-08	32.4	0.0	2.2	1	1	1	2	2	2	2	AAA	domain
AAA_22	PF13401.1	gi|15922877|ref|NP_378546.1|	-	9.4e-06	25.7	0.4	5.6e-05	23.2	0.3	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_13	PF13166.1	gi|15922877|ref|NP_378546.1|	-	9.6e-06	24.3	0.1	0.0077	14.7	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|15922877|ref|NP_378546.1|	-	0.0006	19.1	0.6	0.0063	15.7	0.4	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|15922877|ref|NP_378546.1|	-	0.002	17.2	1.2	0.36	9.8	0.6	2.1	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA	PF00004.24	gi|15922877|ref|NP_378546.1|	-	0.0054	16.9	0.4	0.038	14.2	0.3	2.1	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_18	PF13238.1	gi|15922877|ref|NP_378546.1|	-	0.0068	16.7	0.1	0.016	15.4	0.1	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|15922877|ref|NP_378546.1|	-	0.013	15.5	0.3	0.047	13.6	0.2	1.9	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_10	PF12846.2	gi|15922877|ref|NP_378546.1|	-	0.021	14.2	0.9	2.3	7.5	0.2	2.2	2	1	0	2	2	2	0	AAA-like	domain
SbcCD_C	PF13558.1	gi|15922877|ref|NP_378546.1|	-	0.035	14.0	0.1	0.11	12.4	0.0	1.8	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
MobB	PF03205.9	gi|15922877|ref|NP_378546.1|	-	0.036	13.7	0.2	0.085	12.5	0.1	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Miro	PF08477.8	gi|15922877|ref|NP_378546.1|	-	0.037	14.5	0.1	0.076	13.5	0.1	1.5	1	0	0	1	1	1	0	Miro-like	protein
AAA_29	PF13555.1	gi|15922877|ref|NP_378546.1|	-	0.065	12.7	0.1	0.12	11.9	0.1	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
GvpD	PF07088.6	gi|15922877|ref|NP_378546.1|	-	0.069	11.4	0.0	0.095	11.0	0.0	1.3	1	1	0	1	1	1	0	GvpD	gas	vesicle	protein
AAA_25	PF13481.1	gi|15922877|ref|NP_378546.1|	-	0.071	12.4	0.1	7.3	5.9	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
AAA_17	PF13207.1	gi|15922877|ref|NP_378546.1|	-	0.11	13.3	0.5	0.34	11.7	0.3	1.6	1	1	0	1	1	1	0	AAA	domain
NB-ARC	PF00931.17	gi|15922877|ref|NP_378546.1|	-	0.12	11.2	0.8	0.84	8.4	0.5	2.0	1	1	0	1	1	1	0	NB-ARC	domain
DUF258	PF03193.11	gi|15922877|ref|NP_378546.1|	-	0.13	11.4	0.0	0.22	10.6	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
KaiC	PF06745.8	gi|15922877|ref|NP_378546.1|	-	0.21	10.6	3.5	4.7	6.2	2.4	2.7	1	1	0	1	1	1	0	KaiC
bPH_2	PF03703.9	gi|15922878|ref|NP_378547.1|	-	5.9e-06	26.2	0.0	8.6e-06	25.6	0.0	1.3	1	0	0	1	1	1	1	Bacterial	PH	domain
bPH_4	PF06713.6	gi|15922878|ref|NP_378547.1|	-	0.01	15.7	0.6	0.015	15.1	0.4	1.4	1	0	0	1	1	1	1	Bacterial	PH	domain
DUF1673	PF07895.6	gi|15922878|ref|NP_378547.1|	-	0.25	10.8	6.4	0.3	10.6	4.5	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1673)
DUF3139	PF11337.3	gi|15922878|ref|NP_378547.1|	-	0.53	10.5	8.5	0.06	13.6	2.4	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3139)
SIS	PF01380.17	gi|15922879|ref|NP_378548.1|	-	7.5e-36	122.6	1.7	7.4e-23	80.5	0.9	2.3	2	0	0	2	2	2	2	SIS	domain
GATase_6	PF13522.1	gi|15922879|ref|NP_378548.1|	-	6.6e-18	64.9	0.0	1.5e-17	63.8	0.0	1.6	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_7	PF13537.1	gi|15922879|ref|NP_378548.1|	-	9.6e-16	57.6	0.0	1.7e-15	56.8	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_2	PF00310.16	gi|15922879|ref|NP_378548.1|	-	8.8e-11	41.1	0.0	5.2e-08	31.9	0.0	2.4	1	1	1	2	2	2	2	Glutamine	amidotransferases	class-II
SIS_2	PF13580.1	gi|15922879|ref|NP_378548.1|	-	0.00023	20.9	0.8	0.0041	16.8	0.1	2.9	4	0	0	4	4	4	1	SIS	domain
bact-PGI_C	PF10432.4	gi|15922879|ref|NP_378548.1|	-	0.01	15.5	0.0	0.04	13.6	0.0	2.0	2	0	0	2	2	2	0	Bacterial	phospho-glucose	isomerase	C-terminal	region
DUF3858	PF12970.2	gi|15922879|ref|NP_378548.1|	-	0.014	15.1	0.1	0.052	13.3	0.0	1.9	2	0	0	2	2	2	0	Domain	of	Unknown	Function	with	PDB	structure	(DUF3858)
GATase_4	PF13230.1	gi|15922879|ref|NP_378548.1|	-	0.029	13.0	0.0	0.045	12.4	0.0	1.3	1	0	0	1	1	1	0	Glutamine	amidotransferases	class-II
ParA	PF10609.4	gi|15922879|ref|NP_378548.1|	-	0.03	14.1	0.1	0.18	11.6	0.0	2.2	2	0	0	2	2	2	0	ParA/MinD	ATPase	like
Amidohydro_1	PF01979.15	gi|15922880|ref|NP_378549.1|	-	1.1e-14	54.9	0.1	2e-13	50.7	0.0	2.1	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|15922880|ref|NP_378549.1|	-	9.4e-14	52.0	0.0	1e-06	29.0	0.0	2.3	2	1	0	2	2	2	2	Amidohydrolase
Amidohydro_5	PF13594.1	gi|15922880|ref|NP_378549.1|	-	1.2e-10	41.0	0.3	3.1e-10	39.7	0.2	1.7	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|15922880|ref|NP_378549.1|	-	3.5e-09	36.3	0.1	0.00011	21.5	0.0	2.3	2	0	0	2	2	2	2	Amidohydrolase	family
FAD_binding_4	PF01565.18	gi|15922881|ref|NP_378550.1|	-	2e-27	95.3	0.0	4e-27	94.3	0.0	1.5	1	0	0	1	1	1	1	FAD	binding	domain
FAD-oxidase_C	PF02913.14	gi|15922881|ref|NP_378550.1|	-	3.8e-06	26.4	0.2	4.3e-05	22.9	0.1	2.3	2	0	0	2	2	2	1	FAD	linked	oxidases,	C-terminal	domain
DUF1177	PF06675.6	gi|15922882|ref|NP_378551.1|	-	5.1e-111	369.6	0.5	6.3e-111	369.3	0.3	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1177)
Peptidase_M20	PF01546.23	gi|15922883|ref|NP_378552.1|	-	6e-28	97.6	0.0	7.6e-28	97.2	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|15922883|ref|NP_378552.1|	-	1.3e-13	50.6	0.0	2.9e-13	49.5	0.0	1.6	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
HTH_10	PF04967.7	gi|15922884|ref|NP_378553.1|	-	6.7e-23	80.0	0.1	1.7e-22	78.7	0.0	1.8	2	0	0	2	2	2	1	HTH	DNA	binding	domain
SinI	PF08671.5	gi|15922884|ref|NP_378553.1|	-	0.071	12.5	0.0	0.2	11.1	0.0	1.8	1	0	0	1	1	1	0	Anti-repressor	SinI
HTH_11	PF08279.7	gi|15922884|ref|NP_378553.1|	-	0.075	12.6	0.0	4.6	6.9	0.0	2.9	3	1	0	3	3	3	0	HTH	domain
GerE	PF00196.14	gi|15922884|ref|NP_378553.1|	-	0.11	11.7	1.2	1.3	8.4	0.1	2.8	3	0	0	3	3	3	0	Bacterial	regulatory	proteins,	luxR	family
HTH_19	PF12844.2	gi|15922884|ref|NP_378553.1|	-	0.11	12.5	2.2	1.1	9.3	0.0	3.1	3	1	0	3	3	3	0	Helix-turn-helix	domain
HTH_20	PF12840.2	gi|15922884|ref|NP_378553.1|	-	0.14	11.9	0.0	0.24	11.2	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
AA_permease_2	PF13520.1	gi|15922885|ref|NP_378554.1|	-	6.1e-32	110.6	65.9	1.6e-31	109.3	45.8	1.5	1	1	1	2	2	2	1	Amino	acid	permease
AA_permease	PF00324.16	gi|15922885|ref|NP_378554.1|	-	3.2e-25	88.4	57.0	4.7e-25	87.8	39.5	1.2	1	0	0	1	1	1	1	Amino	acid	permease
Tospo_nucleocap	PF01533.11	gi|15922885|ref|NP_378554.1|	-	0.22	10.7	0.0	0.36	10.0	0.0	1.3	1	0	0	1	1	1	0	Tospovirus	nucleocapsid	protein
OrfB_IS605	PF01385.14	gi|15922886|ref|NP_378555.1|	-	1.6e-75	253.4	9.2	2.1e-75	253.0	6.4	1.2	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.6	gi|15922886|ref|NP_378555.1|	-	4.8e-19	67.7	0.0	1e-18	66.7	0.0	1.6	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
UPF0081	PF03652.10	gi|15922886|ref|NP_378555.1|	-	3.5e-06	27.1	0.0	8.6e-06	25.9	0.0	1.6	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0081)
Y1_Tnp	PF01797.11	gi|15922887|ref|NP_378556.1|	-	2.3e-43	146.9	0.0	2.6e-43	146.7	0.0	1.0	1	0	0	1	1	1	1	Transposase	IS200	like
GAD	PF02938.9	gi|15922887|ref|NP_378556.1|	-	0.075	13.1	0.2	4.5	7.4	0.0	2.1	2	0	0	2	2	2	0	GAD	domain
Raffinose_syn	PF05691.7	gi|15922888|ref|NP_378557.1|	-	3.1e-49	167.2	1.0	1.2e-26	92.5	0.2	3.1	1	1	1	2	2	2	2	Raffinose	synthase	or	seed	imbibition	protein	Sip1
Melibiase	PF02065.13	gi|15922888|ref|NP_378557.1|	-	6e-10	38.3	0.2	1.1e-09	37.5	0.1	1.4	1	0	0	1	1	1	1	Melibiase
Glyco_hydro_31	PF01055.21	gi|15922888|ref|NP_378557.1|	-	0.0012	17.7	0.0	0.0017	17.2	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	hydrolases	family	31
AF0941-like	PF14591.1	gi|15922888|ref|NP_378557.1|	-	0.039	14.0	0.8	0.098	12.7	0.6	1.6	1	0	0	1	1	1	0	AF0941-like
ChaB	PF06150.7	gi|15922888|ref|NP_378557.1|	-	0.16	11.7	0.2	0.86	9.4	0.0	2.2	2	0	0	2	2	2	0	ChaB
SGL	PF08450.7	gi|15922889|ref|NP_378558.1|	-	1.8e-78	263.3	0.1	2e-78	263.1	0.0	1.0	1	0	0	1	1	1	1	SMP-30/Gluconolaconase/LRE-like	region
Arylesterase	PF01731.15	gi|15922889|ref|NP_378558.1|	-	0.0011	18.9	0.0	0.0023	17.9	0.0	1.5	1	0	0	1	1	1	1	Arylesterase
Str_synth	PF03088.11	gi|15922889|ref|NP_378558.1|	-	0.0047	16.9	0.0	0.012	15.5	0.0	1.7	1	0	0	1	1	1	1	Strictosidine	synthase
PGI	PF00342.14	gi|15922889|ref|NP_378558.1|	-	0.013	13.9	0.0	0.018	13.4	0.0	1.1	1	0	0	1	1	1	0	Phosphoglucose	isomerase
Reg_prop	PF07494.6	gi|15922889|ref|NP_378558.1|	-	0.1	12.6	1.8	9.4	6.6	0.1	3.6	3	0	0	3	3	3	0	Two	component	regulator	propeller
adh_short	PF00106.20	gi|15922890|ref|NP_378559.1|	-	6.9e-24	84.6	0.0	9.9e-24	84.1	0.0	1.2	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|15922890|ref|NP_378559.1|	-	2.9e-23	82.8	0.1	3.9e-23	82.4	0.1	1.1	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|15922890|ref|NP_378559.1|	-	3.3e-09	36.6	0.0	7.7e-09	35.4	0.0	1.6	1	1	0	1	1	1	1	KR	domain
NAD_binding_10	PF13460.1	gi|15922890|ref|NP_378559.1|	-	1.1e-05	25.4	0.0	2.1e-05	24.6	0.0	1.4	1	0	0	1	1	1	1	NADH(P)-binding
Epimerase	PF01370.16	gi|15922890|ref|NP_378559.1|	-	8.7e-05	22.0	0.1	0.00016	21.2	0.1	1.7	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
2-Hacid_dh_C	PF02826.14	gi|15922890|ref|NP_378559.1|	-	0.0025	17.0	0.1	0.0025	17.0	0.0	1.7	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
THF_DHG_CYH_C	PF02882.14	gi|15922890|ref|NP_378559.1|	-	0.0055	15.7	0.1	0.0091	15.0	0.0	1.3	1	0	0	1	1	1	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
Cpn10	PF00166.16	gi|15922890|ref|NP_378559.1|	-	0.044	13.7	0.1	0.38	10.7	0.0	2.2	2	0	0	2	2	2	0	Chaperonin	10	Kd	subunit
DUF1776	PF08643.5	gi|15922890|ref|NP_378559.1|	-	0.092	11.8	0.1	0.11	11.5	0.1	1.2	1	0	0	1	1	1	0	Fungal	family	of	unknown	function	(DUF1776)
Eno-Rase_NADH_b	PF12242.3	gi|15922890|ref|NP_378559.1|	-	0.12	12.1	0.2	0.27	11.0	0.2	1.5	1	0	0	1	1	1	0	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
NAD_binding_7	PF13241.1	gi|15922890|ref|NP_378559.1|	-	0.13	12.5	0.1	0.23	11.7	0.0	1.5	1	0	0	1	1	1	0	Putative	NAD(P)-binding
DUF1924	PF09086.6	gi|15922890|ref|NP_378559.1|	-	0.17	11.9	0.0	0.29	11.2	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1924)
Sugar_tr	PF00083.19	gi|15922891|ref|NP_378560.1|	-	2.5e-89	299.9	32.2	3e-89	299.6	22.3	1.0	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|15922891|ref|NP_378560.1|	-	1.2e-25	89.9	39.3	1.2e-25	89.9	27.2	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
SAF	PF08666.7	gi|15922892|ref|NP_378561.1|	-	2.3e-13	50.3	7.7	1.8e-12	47.4	5.3	2.2	1	1	0	1	1	1	1	SAF	domain
DUF2190	PF09956.4	gi|15922892|ref|NP_378561.1|	-	0.0014	18.3	0.1	0.53	10.0	0.0	2.1	2	0	0	2	2	2	2	Uncharacterized	conserved	protein	(DUF2190)
DUF2118	PF09891.4	gi|15922892|ref|NP_378561.1|	-	0.031	14.0	0.0	0.039	13.6	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2118)
GD_AH_C	PF04295.8	gi|15922893|ref|NP_378562.1|	-	1.7e-127	425.3	0.0	1.9e-127	425.2	0.0	1.0	1	0	0	1	1	1	1	D-galactarate	dehydratase	/	Altronate	hydrolase,	C	terminus
WHEP-TRS	PF00458.15	gi|15922893|ref|NP_378562.1|	-	0.1	12.2	0.0	0.23	11.1	0.0	1.6	1	0	0	1	1	1	0	WHEP-TRS	domain
MR_MLE_C	PF13378.1	gi|15922894|ref|NP_378563.1|	-	1.8e-18	66.5	0.0	3.2e-18	65.7	0.0	1.4	1	0	0	1	1	1	1	Enolase	C-terminal	domain-like
MR_MLE	PF01188.16	gi|15922894|ref|NP_378563.1|	-	2.2e-10	40.9	0.0	4e-10	40.0	0.0	1.5	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
MR_MLE_N	PF02746.11	gi|15922894|ref|NP_378563.1|	-	0.0043	17.0	0.0	0.0083	16.1	0.0	1.4	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	N-terminal	domain
Gemini_AL3	PF01407.12	gi|15922894|ref|NP_378563.1|	-	0.0046	16.4	0.0	0.013	14.9	0.0	1.7	1	0	0	1	1	1	1	Geminivirus	AL3	protein
Glyco_trans_1_2	PF13524.1	gi|15922894|ref|NP_378563.1|	-	0.097	12.9	0.0	0.25	11.6	0.0	1.6	1	0	0	1	1	1	0	Glycosyl	transferases	group	1
FCD	PF07729.7	gi|15922895|ref|NP_378564.1|	-	5.3e-26	91.4	1.8	7.2e-26	90.9	1.2	1.2	1	0	0	1	1	1	1	FCD	domain
GntR	PF00392.16	gi|15922895|ref|NP_378564.1|	-	4.6e-16	58.0	0.0	1.1e-15	56.8	0.0	1.7	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HTH_24	PF13412.1	gi|15922895|ref|NP_378564.1|	-	5.2e-06	25.7	1.0	2.2e-05	23.7	0.0	2.5	3	0	0	3	3	3	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|15922895|ref|NP_378564.1|	-	2.2e-05	23.9	0.7	0.00035	20.1	0.1	2.8	2	1	0	2	2	2	1	HTH	domain
FadR_C	PF07840.7	gi|15922895|ref|NP_378564.1|	-	0.00041	20.0	0.1	0.0006	19.4	0.1	1.5	1	1	0	1	1	1	1	FadR	C-terminal	domain
TrmB	PF01978.14	gi|15922895|ref|NP_378564.1|	-	0.00041	20.0	0.0	0.0015	18.2	0.0	1.9	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_Crp_2	PF13545.1	gi|15922895|ref|NP_378564.1|	-	0.00041	20.0	0.0	0.0013	18.4	0.0	1.8	1	1	0	1	1	1	1	Crp-like	helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|15922895|ref|NP_378564.1|	-	0.0052	16.6	0.1	0.018	14.9	0.0	1.9	2	0	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Prefoldin	PF02996.12	gi|15922895|ref|NP_378564.1|	-	0.0064	16.1	2.1	0.013	15.1	1.5	1.4	1	0	0	1	1	1	1	Prefoldin	subunit
MarR	PF01047.17	gi|15922895|ref|NP_378564.1|	-	0.0085	15.7	0.0	0.088	12.5	0.0	2.3	2	0	0	2	2	2	1	MarR	family
HTH_27	PF13463.1	gi|15922895|ref|NP_378564.1|	-	0.014	15.7	0.0	0.056	13.7	0.0	2.0	2	1	0	2	2	2	0	Winged	helix	DNA-binding	domain
TRF	PF08558.5	gi|15922895|ref|NP_378564.1|	-	0.016	14.5	0.7	0.029	13.7	0.4	1.5	1	1	0	1	1	1	0	Telomere	repeat	binding	factor	(TRF)
TFIIE_alpha	PF02002.12	gi|15922895|ref|NP_378564.1|	-	0.021	14.3	0.1	0.021	14.3	0.0	3.1	3	1	0	3	3	3	0	TFIIE	alpha	subunit
HTH_5	PF01022.15	gi|15922895|ref|NP_378564.1|	-	0.038	13.6	0.0	2.1	8.0	0.0	2.8	2	1	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
Rrf2	PF02082.15	gi|15922895|ref|NP_378564.1|	-	0.055	13.6	0.0	0.14	12.3	0.0	1.7	1	0	0	1	1	1	0	Transcriptional	regulator
PaaX	PF07848.7	gi|15922895|ref|NP_378564.1|	-	0.063	13.2	0.0	0.22	11.5	0.0	1.8	2	0	0	2	2	2	0	PaaX-like	protein
DUF4423	PF14394.1	gi|15922895|ref|NP_378564.1|	-	0.073	12.6	2.6	0.42	10.1	0.0	2.9	3	1	0	3	3	3	0	Domain	of	unknown	function	(DUF4423)
HTH_AsnC-type	PF13404.1	gi|15922895|ref|NP_378564.1|	-	0.078	12.5	0.1	0.18	11.3	0.1	1.6	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
ATP-synt_S1	PF05827.7	gi|15922895|ref|NP_378564.1|	-	0.081	12.2	0.1	0.11	11.7	0.1	1.2	1	0	0	1	1	1	0	Vacuolar	ATP	synthase	subunit	S1	(ATP6S1)
Rhodanese	PF00581.15	gi|15922897|ref|NP_378566.1|	-	1.5e-42	144.5	0.1	3.8e-22	78.7	0.0	2.2	2	0	0	2	2	2	2	Rhodanese-like	domain
TP_methylase	PF00590.15	gi|15922898|ref|NP_378567.1|	-	1.5e-06	28.0	0.0	1.7e-06	27.9	0.0	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
NIR_SIR	PF01077.17	gi|15922899|ref|NP_378568.1|	-	3.5e-44	149.9	0.1	4.4e-41	139.8	0.0	3.4	3	2	0	3	3	3	2	Nitrite	and	sulphite	reductase	4Fe-4S	domain
NIR_SIR_ferr	PF03460.12	gi|15922899|ref|NP_378568.1|	-	1.7e-17	62.7	0.1	7.1e-09	35.1	0.0	3.8	3	1	0	3	3	3	2	Nitrite/Sulfite	reductase	ferredoxin-like	half	domain
PAPS_reduct	PF01507.14	gi|15922900|ref|NP_378569.1|	-	1.2e-48	165.1	0.1	1.5e-48	164.9	0.0	1.1	1	0	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
DUF1947	PF09183.5	gi|15922900|ref|NP_378569.1|	-	0.11	12.3	2.3	6.1	6.6	0.0	2.9	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF1947)
ATP-sulfurylase	PF01747.12	gi|15922901|ref|NP_378570.1|	-	9.1e-80	266.9	0.1	1.2e-79	266.6	0.0	1.1	1	0	0	1	1	1	1	ATP-sulfurylase
PUA_2	PF14306.1	gi|15922901|ref|NP_378570.1|	-	1.3e-39	135.1	0.0	2.6e-39	134.2	0.0	1.5	2	0	0	2	2	2	1	PUA-like	domain
TF_Zn_Ribbon	PF08271.7	gi|15922901|ref|NP_378570.1|	-	0.00042	19.5	0.2	0.00093	18.4	0.2	1.6	1	0	0	1	1	1	1	TFIIB	zinc-binding
B5	PF03484.10	gi|15922902|ref|NP_378571.1|	-	0.06	13.1	0.2	0.15	11.9	0.1	1.6	1	0	0	1	1	1	0	tRNA	synthetase	B5	domain
HAD_2	PF13419.1	gi|15922903|ref|NP_378572.1|	-	1.2e-24	87.4	0.0	1.7e-24	87.0	0.0	1.2	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|15922903|ref|NP_378572.1|	-	6.7e-07	28.9	0.0	1.1e-06	28.2	0.0	1.3	1	0	0	1	1	1	1	HAD-hyrolase-like
Pro-kuma_activ	PF09286.6	gi|15922903|ref|NP_378572.1|	-	0.021	14.8	0.0	0.04	13.9	0.0	1.4	1	0	0	1	1	1	0	Pro-kumamolisin,	activation	domain
AAA_14	PF13173.1	gi|15922904|ref|NP_378573.1|	-	3.4e-32	111.0	0.1	9.2e-32	109.6	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
DUF4143	PF13635.1	gi|15922904|ref|NP_378573.1|	-	2e-11	43.8	0.1	4.2e-11	42.8	0.0	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
Arch_ATPase	PF01637.13	gi|15922904|ref|NP_378573.1|	-	0.00095	18.9	2.9	0.027	14.1	0.1	2.9	2	1	1	3	3	3	2	Archaeal	ATPase
PCI	PF01399.22	gi|15922904|ref|NP_378573.1|	-	0.0036	17.5	0.3	0.008	16.4	0.2	1.5	1	0	0	1	1	1	1	PCI	domain
AAA_17	PF13207.1	gi|15922904|ref|NP_378573.1|	-	0.0039	17.9	2.4	0.0055	17.5	0.1	2.6	3	1	0	3	3	3	1	AAA	domain
ABC_tran	PF00005.22	gi|15922904|ref|NP_378573.1|	-	0.0058	16.9	0.0	0.015	15.6	0.0	1.6	1	1	0	1	1	1	1	ABC	transporter
AAA_18	PF13238.1	gi|15922904|ref|NP_378573.1|	-	0.076	13.3	0.4	0.31	11.3	0.0	2.2	2	1	0	2	2	2	0	AAA	domain
AAA_16	PF13191.1	gi|15922904|ref|NP_378573.1|	-	0.13	12.2	0.0	0.28	11.1	0.0	1.5	1	0	0	1	1	1	0	AAA	ATPase	domain
MR_MLE_C	PF13378.1	gi|15922905|ref|NP_378574.1|	-	2.5e-24	85.3	0.0	4.7e-24	84.5	0.0	1.5	1	0	0	1	1	1	1	Enolase	C-terminal	domain-like
MR_MLE	PF01188.16	gi|15922905|ref|NP_378574.1|	-	6.6e-16	58.6	0.0	5.6e-15	55.6	0.0	2.3	2	0	0	2	2	2	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
MR_MLE_N	PF02746.11	gi|15922905|ref|NP_378574.1|	-	1.3e-10	41.3	0.0	2.8e-10	40.2	0.0	1.5	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	N-terminal	domain
Pyr_redox	PF00070.22	gi|15922906|ref|NP_378575.1|	-	1.8e-15	57.1	1.0	1.8e-15	57.1	0.7	2.7	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.9	gi|15922906|ref|NP_378575.1|	-	1.3e-12	48.0	12.8	1.3e-10	41.5	8.9	4.0	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|15922906|ref|NP_378575.1|	-	2.7e-09	36.3	4.7	0.0001	21.3	0.0	3.5	4	0	0	4	4	4	2	FAD	dependent	oxidoreductase
Pyr_redox_3	PF13738.1	gi|15922906|ref|NP_378575.1|	-	4.6e-07	30.0	0.2	0.0002	21.4	0.0	2.6	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|15922906|ref|NP_378575.1|	-	0.00049	20.0	1.2	0.0076	16.2	0.0	2.4	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Lycopene_cycl	PF05834.7	gi|15922906|ref|NP_378575.1|	-	0.0046	15.9	0.4	0.23	10.3	0.1	2.7	2	1	1	3	3	3	1	Lycopene	cyclase	protein
3HCDH_N	PF02737.13	gi|15922906|ref|NP_378575.1|	-	0.0069	16.0	0.1	0.017	14.7	0.0	1.7	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
GIDA	PF01134.17	gi|15922906|ref|NP_378575.1|	-	0.011	14.6	2.6	0.28	9.9	0.1	2.8	2	1	1	3	3	3	0	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.9	gi|15922906|ref|NP_378575.1|	-	0.016	13.6	6.1	0.09	11.2	0.1	3.6	3	1	1	4	4	4	0	HI0933-like	protein
NAD_Gly3P_dh_N	PF01210.18	gi|15922906|ref|NP_378575.1|	-	0.028	14.1	0.0	0.028	14.1	0.0	1.8	2	0	0	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
DFP	PF04127.10	gi|15922906|ref|NP_378575.1|	-	0.046	13.3	0.0	0.17	11.4	0.0	2.0	1	1	1	2	2	2	0	DNA	/	pantothenate	metabolism	flavoprotein
FAD_binding_3	PF01494.14	gi|15922906|ref|NP_378575.1|	-	0.078	12.0	2.4	0.12	11.4	0.1	2.0	2	0	0	2	2	2	0	FAD	binding	domain
DUF3335	PF11814.3	gi|15922906|ref|NP_378575.1|	-	0.13	11.4	0.0	0.26	10.4	0.0	1.5	1	0	0	1	1	1	0	Peptidase_C39	like	family
AlaDh_PNT_C	PF01262.16	gi|15922906|ref|NP_378575.1|	-	0.29	10.7	5.1	3	7.3	0.1	2.9	3	0	0	3	3	3	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
CoA_transf_3	PF02515.12	gi|15922907|ref|NP_378576.1|	-	1.5e-36	125.4	0.0	1.9e-36	125.1	0.0	1.1	1	0	0	1	1	1	1	CoA-transferase	family	III
RuvA_C	PF07499.8	gi|15922907|ref|NP_378576.1|	-	0.11	12.7	0.0	0.4	10.8	0.0	1.9	2	0	0	2	2	2	0	RuvA,	C-terminal	domain
AMP-binding	PF00501.23	gi|15922908|ref|NP_378577.1|	-	3e-85	286.1	0.0	3.9e-85	285.7	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|15922908|ref|NP_378577.1|	-	1.8e-21	76.8	0.2	6.1e-21	75.1	0.1	2.0	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
MFS_1	PF07690.11	gi|15922909|ref|NP_378578.1|	-	3.9e-26	91.6	50.2	3.9e-26	91.6	34.8	2.0	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|15922909|ref|NP_378578.1|	-	1.5e-18	66.6	43.3	1.1e-14	53.9	30.0	2.1	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_2	PF13347.1	gi|15922909|ref|NP_378578.1|	-	1.4	7.2	32.7	15	3.8	22.7	2.3	1	1	0	1	1	1	0	MFS/sugar	transport	protein
ADH_N	PF08240.7	gi|15922910|ref|NP_378579.1|	-	5.5e-35	119.4	0.2	8.9e-35	118.7	0.1	1.3	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|15922910|ref|NP_378579.1|	-	3.7e-30	104.1	1.2	4e-30	104.0	0.1	1.6	2	0	0	2	2	2	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|15922910|ref|NP_378579.1|	-	1.4e-12	48.6	0.1	3e-12	47.5	0.0	1.6	2	0	0	2	2	1	1	Zinc-binding	dehydrogenase
Methyltransf_18	PF12847.2	gi|15922910|ref|NP_378579.1|	-	2.8e-05	24.6	0.0	5.2e-05	23.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|15922910|ref|NP_378579.1|	-	4.5e-05	23.0	0.2	7.8e-05	22.3	0.1	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
DapB_N	PF01113.15	gi|15922910|ref|NP_378579.1|	-	0.00055	19.8	0.2	0.001	18.9	0.1	1.5	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
Methyltransf_12	PF08242.7	gi|15922910|ref|NP_378579.1|	-	0.0016	18.8	0.0	0.0029	18.0	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|15922910|ref|NP_378579.1|	-	0.0048	17.2	0.0	0.0097	16.2	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|15922910|ref|NP_378579.1|	-	0.0083	15.5	0.1	0.015	14.6	0.1	1.4	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_26	PF13659.1	gi|15922910|ref|NP_378579.1|	-	0.013	15.5	0.0	0.024	14.6	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
AlaDh_PNT_C	PF01262.16	gi|15922910|ref|NP_378579.1|	-	0.021	14.3	0.1	0.034	13.6	0.1	1.3	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
Methyltransf_11	PF08241.7	gi|15922910|ref|NP_378579.1|	-	0.021	15.2	0.0	0.043	14.3	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_4	PF02390.12	gi|15922910|ref|NP_378579.1|	-	0.042	12.8	0.0	0.088	11.8	0.0	1.5	1	0	0	1	1	1	0	Putative	methyltransferase
IF3_N	PF05198.11	gi|15922910|ref|NP_378579.1|	-	0.042	13.7	0.1	2	8.3	0.0	2.8	2	0	0	2	2	2	0	Translation	initiation	factor	IF-3,	N-terminal	domain
Eno-Rase_NADH_b	PF12242.3	gi|15922910|ref|NP_378579.1|	-	0.055	13.2	0.5	0.12	12.1	0.3	1.6	1	0	0	1	1	1	0	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
Methyltransf_32	PF13679.1	gi|15922910|ref|NP_378579.1|	-	0.074	12.7	0.0	0.12	12.0	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
3HCDH_N	PF02737.13	gi|15922910|ref|NP_378579.1|	-	0.13	11.8	0.7	0.23	11.0	0.5	1.4	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
PaREP1	PF05942.6	gi|15922911|ref|NP_378580.1|	-	1.9e-32	111.5	3.0	2.7e-32	111.0	2.1	1.2	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
DUF357	PF04010.8	gi|15922911|ref|NP_378580.1|	-	0.0001	21.9	0.3	0.00025	20.6	0.1	1.7	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF357)
HEPN	PF05168.9	gi|15922911|ref|NP_378580.1|	-	0.02	14.7	2.6	0.035	13.9	0.8	2.0	2	0	0	2	2	2	0	HEPN	domain
DUF3126	PF11324.3	gi|15922911|ref|NP_378580.1|	-	0.065	12.9	0.1	0.17	11.5	0.1	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3126)
DUF4398	PF14346.1	gi|15922911|ref|NP_378580.1|	-	0.12	12.3	4.7	0.25	11.4	3.3	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4398)
PaREP1	PF05942.6	gi|15922912|ref|NP_378581.1|	-	7.2e-26	90.3	0.7	7.2e-26	90.3	0.5	1.6	2	0	0	2	2	2	1	Archaeal	PaREP1/PaREP8	family
HisKA_3	PF07730.8	gi|15922912|ref|NP_378581.1|	-	0.045	14.0	0.0	0.1	12.9	0.0	1.5	1	0	0	1	1	1	0	Histidine	kinase
DUF2393	PF09624.5	gi|15922913|ref|NP_378582.1|	-	0.13	11.7	3.1	0.29	10.6	2.1	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2393)
CcoS	PF03597.10	gi|15922914|ref|NP_378583.1|	-	1.1	8.7	6.3	4.1	6.9	0.4	3.8	2	0	0	2	2	2	0	Cytochrome	oxidase	maturation	protein	cbb3-type
MFS_1	PF07690.11	gi|15922914|ref|NP_378583.1|	-	6.9	5.2	61.6	0.41	9.2	19.0	2.8	1	1	0	2	2	2	0	Major	Facilitator	Superfamily
Antitoxin-MazE	PF04014.13	gi|15922915|ref|NP_378584.1|	-	6.2e-11	41.7	1.6	6.6e-11	41.6	0.6	1.4	1	1	0	1	1	1	1	Antidote-toxin	recognition	MazE
RepA_C	PF04796.7	gi|15922916|ref|NP_378585.1|	-	0.062	12.9	0.0	0.085	12.4	0.0	1.2	1	0	0	1	1	1	0	Plasmid	encoded	RepA	protein
NTP_transf_2	PF01909.18	gi|15922917|ref|NP_378586.1|	-	3e-10	40.2	2.3	9.2e-10	38.7	1.6	1.9	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
DUF294	PF03445.8	gi|15922917|ref|NP_378586.1|	-	0.00016	21.3	0.0	0.0011	18.5	0.0	2.0	2	0	0	2	2	2	1	Putative	nucleotidyltransferase	DUF294
AAA	PF00004.24	gi|15922918|ref|NP_378587.1|	-	4.2e-99	327.9	0.0	2.5e-48	163.6	0.0	2.4	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.1	gi|15922918|ref|NP_378587.1|	-	7.5e-16	58.6	0.0	4e-07	30.2	0.0	2.6	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_5	PF07728.9	gi|15922918|ref|NP_378587.1|	-	2e-15	56.7	0.1	1.8e-06	27.6	0.0	3.7	2	2	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
RuvB_N	PF05496.7	gi|15922918|ref|NP_378587.1|	-	2.6e-15	56.1	0.0	1e-06	27.9	0.0	3.1	3	1	1	4	4	3	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_22	PF13401.1	gi|15922918|ref|NP_378587.1|	-	2.8e-14	53.3	0.4	0.00018	21.6	0.1	4.2	2	2	0	2	2	2	2	AAA	domain
AAA_14	PF13173.1	gi|15922918|ref|NP_378587.1|	-	2.9e-12	46.5	0.0	0.00014	21.7	0.0	2.8	3	0	0	3	3	2	2	AAA	domain
AAA_2	PF07724.9	gi|15922918|ref|NP_378587.1|	-	5.2e-12	46.0	0.0	0.00012	22.0	0.0	2.7	2	1	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
AAA_17	PF13207.1	gi|15922918|ref|NP_378587.1|	-	3.4e-11	44.0	0.0	0.00062	20.5	0.0	3.0	3	0	0	3	3	2	2	AAA	domain
TIP49	PF06068.8	gi|15922918|ref|NP_378587.1|	-	5.7e-11	41.7	0.1	4e-05	22.5	0.0	2.4	2	0	0	2	2	2	2	TIP49	C-terminus
AAA_19	PF13245.1	gi|15922918|ref|NP_378587.1|	-	9.1e-11	41.3	0.1	0.00028	20.5	0.0	3.1	3	0	0	3	3	2	2	Part	of	AAA	domain
Zeta_toxin	PF06414.7	gi|15922918|ref|NP_378587.1|	-	3.1e-09	36.2	0.0	9.6e-05	21.5	0.0	2.4	2	0	0	2	2	2	2	Zeta	toxin
Arch_ATPase	PF01637.13	gi|15922918|ref|NP_378587.1|	-	3.5e-09	36.7	0.0	0.018	14.7	0.0	3.9	2	2	2	4	4	4	3	Archaeal	ATPase
IstB_IS21	PF01695.12	gi|15922918|ref|NP_378587.1|	-	3.5e-09	36.3	0.2	0.0038	16.6	0.0	3.0	3	0	0	3	3	3	2	IstB-like	ATP	binding	protein
AAA_33	PF13671.1	gi|15922918|ref|NP_378587.1|	-	4.7e-09	36.2	0.0	0.00069	19.5	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
Sigma54_activat	PF00158.21	gi|15922918|ref|NP_378587.1|	-	2.2e-08	33.7	0.1	0.0043	16.5	0.0	3.9	2	2	1	3	3	3	2	Sigma-54	interaction	domain
AAA_28	PF13521.1	gi|15922918|ref|NP_378587.1|	-	5.9e-08	32.8	0.0	0.014	15.3	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
Mg_chelatase	PF01078.16	gi|15922918|ref|NP_378587.1|	-	6.5e-08	31.9	0.6	0.0091	15.1	0.0	2.3	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
RNA_helicase	PF00910.17	gi|15922918|ref|NP_378587.1|	-	1.2e-07	31.8	0.0	0.0055	16.8	0.0	2.7	2	0	0	2	2	2	2	RNA	helicase
AAA_18	PF13238.1	gi|15922918|ref|NP_378587.1|	-	1.2e-07	32.0	0.0	0.019	15.2	0.0	2.7	2	1	0	2	2	2	2	AAA	domain
Vps4_C	PF09336.5	gi|15922918|ref|NP_378587.1|	-	1.9e-07	30.8	0.7	0.00073	19.3	0.0	3.8	4	0	0	4	4	3	1	Vps4	C	terminal	oligomerisation	domain
AAA_25	PF13481.1	gi|15922918|ref|NP_378587.1|	-	2.2e-07	30.4	7.1	0.063	12.6	0.1	4.2	2	2	0	3	3	3	2	AAA	domain
Parvo_NS1	PF01057.12	gi|15922918|ref|NP_378587.1|	-	9.1e-07	28.0	0.3	0.009	14.9	0.0	2.3	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
AAA_24	PF13479.1	gi|15922918|ref|NP_378587.1|	-	1.3e-06	28.1	0.9	0.033	13.7	0.1	2.5	2	0	0	2	2	2	2	AAA	domain
CDC48_N	PF02359.13	gi|15922918|ref|NP_378587.1|	-	3.4e-06	26.9	0.0	1.1e-05	25.2	0.0	1.9	1	0	0	1	1	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
Sigma54_activ_2	PF14532.1	gi|15922918|ref|NP_378587.1|	-	4.6e-06	26.7	0.0	0.07	13.1	0.0	2.6	2	0	0	2	2	2	2	Sigma-54	interaction	domain
Bac_DnaA	PF00308.13	gi|15922918|ref|NP_378587.1|	-	5e-06	26.3	0.0	0.071	12.7	0.0	3.4	2	2	1	3	3	3	2	Bacterial	dnaA	protein
DUF815	PF05673.8	gi|15922918|ref|NP_378587.1|	-	9.5e-06	24.7	0.0	0.084	11.7	0.0	2.6	2	1	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
NACHT	PF05729.7	gi|15922918|ref|NP_378587.1|	-	1.1e-05	25.1	0.4	0.15	11.7	0.0	3.5	4	0	0	4	4	4	2	NACHT	domain
AAA_3	PF07726.6	gi|15922918|ref|NP_378587.1|	-	1.8e-05	24.3	0.0	0.19	11.3	0.0	2.7	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
KaiC	PF06745.8	gi|15922918|ref|NP_378587.1|	-	4.8e-05	22.5	1.9	0.78	8.8	0.0	4.3	3	2	0	4	4	4	2	KaiC
PhoH	PF02562.11	gi|15922918|ref|NP_378587.1|	-	5.7e-05	22.4	0.1	0.27	10.4	0.0	2.5	2	0	0	2	2	2	2	PhoH-like	protein
AAA_11	PF13086.1	gi|15922918|ref|NP_378587.1|	-	0.00011	21.8	0.0	0.31	10.5	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
DUF2075	PF09848.4	gi|15922918|ref|NP_378587.1|	-	0.00021	20.3	0.0	0.2	10.6	0.0	2.3	2	0	0	2	2	2	2	Uncharacterized	conserved	protein	(DUF2075)
NB-ARC	PF00931.17	gi|15922918|ref|NP_378587.1|	-	0.00023	20.1	0.0	0.46	9.2	0.0	2.4	2	0	0	2	2	2	2	NB-ARC	domain
ABC_tran	PF00005.22	gi|15922918|ref|NP_378587.1|	-	0.00039	20.7	0.0	1.4	9.2	0.0	2.7	2	0	0	2	2	2	2	ABC	transporter
UPF0079	PF02367.12	gi|15922918|ref|NP_378587.1|	-	0.00049	19.7	0.0	1.3	8.6	0.0	2.6	2	0	0	2	2	2	2	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_10	PF12846.2	gi|15922918|ref|NP_378587.1|	-	0.00061	19.3	0.3	0.8	9.0	0.0	3.8	2	2	0	2	2	2	1	AAA-like	domain
NTPase_1	PF03266.10	gi|15922918|ref|NP_378587.1|	-	0.0013	18.5	2.6	6.3	6.4	0.0	4.7	3	2	2	5	5	5	0	NTPase
AAA_30	PF13604.1	gi|15922918|ref|NP_378587.1|	-	0.0014	18.2	0.0	0.99	8.9	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
ATP-synt_ab	PF00006.20	gi|15922918|ref|NP_378587.1|	-	0.0016	17.9	0.0	0.24	10.8	0.0	2.3	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_23	PF13476.1	gi|15922918|ref|NP_378587.1|	-	0.0019	18.5	0.0	2.3	8.5	0.0	2.8	2	0	0	2	2	2	1	AAA	domain
ResIII	PF04851.10	gi|15922918|ref|NP_378587.1|	-	0.0041	16.9	0.0	1.6	8.5	0.0	2.6	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
T2SE	PF00437.15	gi|15922918|ref|NP_378587.1|	-	0.0058	15.5	0.0	4.9	5.9	0.0	3.0	3	0	0	3	3	3	0	Type	II/IV	secretion	system	protein
Viral_helicase1	PF01443.13	gi|15922918|ref|NP_378587.1|	-	0.014	14.9	0.0	0.4	10.1	0.0	2.3	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
IPT	PF01745.11	gi|15922918|ref|NP_378587.1|	-	0.02	14.0	0.1	0.7	9.0	0.0	2.4	2	0	0	2	2	2	0	Isopentenyl	transferase
AAA_29	PF13555.1	gi|15922918|ref|NP_378587.1|	-	0.024	14.1	0.0	7.1	6.2	0.0	2.5	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
CPT	PF07931.7	gi|15922918|ref|NP_378587.1|	-	0.029	14.0	0.0	8.1	6.0	0.0	2.3	2	0	0	2	2	2	0	Chloramphenicol	phosphotransferase-like	protein
SKI	PF01202.17	gi|15922918|ref|NP_378587.1|	-	0.03	14.2	0.0	9.1	6.1	0.0	2.5	2	0	0	2	2	2	0	Shikimate	kinase
Guanylate_kin	PF00625.16	gi|15922918|ref|NP_378587.1|	-	0.049	13.0	0.2	45	3.4	0.0	3.9	2	2	2	4	4	4	0	Guanylate	kinase
DAP3	PF10236.4	gi|15922918|ref|NP_378587.1|	-	0.053	12.4	0.0	3.1	6.6	0.0	2.6	3	0	0	3	3	3	0	Mitochondrial	ribosomal	death-associated	protein	3
KTI12	PF08433.5	gi|15922918|ref|NP_378587.1|	-	0.08	12.1	0.0	5.4	6.1	0.0	2.4	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
Torsin	PF06309.6	gi|15922918|ref|NP_378587.1|	-	0.16	11.8	0.0	14	5.5	0.0	2.5	2	0	0	2	2	2	0	Torsin
AAA_21	PF13304.1	gi|15922918|ref|NP_378587.1|	-	0.52	10.2	3.2	8.2	6.2	0.4	3.4	3	1	1	4	4	4	0	AAA	domain
Vps55	PF04133.9	gi|15922919|ref|NP_378588.1|	-	0.77	9.5	8.7	1.1	8.9	6.0	1.3	1	1	0	1	1	1	0	Vacuolar	protein	sorting	55
DUF4131	PF13567.1	gi|15922920|ref|NP_378589.1|	-	0.046	13.1	0.9	0.047	13.1	0.6	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
DUF4605	PF15378.1	gi|15922920|ref|NP_378589.1|	-	0.15	11.7	2.3	3.9	7.2	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4605)
Tmemb_40	PF10160.4	gi|15922920|ref|NP_378589.1|	-	0.32	10.1	5.0	0.35	10.0	3.5	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein
SdpI	PF13630.1	gi|15922920|ref|NP_378589.1|	-	0.97	9.1	5.0	1.2	8.8	3.5	1.1	1	0	0	1	1	1	0	SdpI/YhfL	protein	family
DUF2649	PF10854.3	gi|15922921|ref|NP_378590.1|	-	7.9	6.6	8.6	1.1	9.4	0.1	3.0	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2649)
Col_cuticle_N	PF01484.12	gi|15922922|ref|NP_378591.1|	-	0.86	9.3	8.9	5	6.8	0.1	4.0	2	1	0	2	2	2	0	Nematode	cuticle	collagen	N-terminal	domain
DUF1404	PF07185.6	gi|15922923|ref|NP_378592.1|	-	3.7e-43	147.0	17.7	4.3e-43	146.8	12.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1404)
LacY_symp	PF01306.14	gi|15922924|ref|NP_378593.1|	-	0.17	10.4	1.5	0.17	10.3	1.1	1.0	1	0	0	1	1	1	0	LacY	proton/sugar	symporter
DUF1469	PF07332.6	gi|15922924|ref|NP_378593.1|	-	4.8	6.9	8.3	5.5	6.7	5.8	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1469)
SP_C-Propep	PF08999.5	gi|15922924|ref|NP_378593.1|	-	7.4	6.1	7.4	1.2	8.6	2.0	1.9	1	1	1	2	2	2	0	Surfactant	protein	C,	N	terminal	propeptide
Syndecan	PF01034.15	gi|15922924|ref|NP_378593.1|	-	8.2	6.1	9.4	3.4	7.3	0.9	2.1	1	1	1	2	2	2	0	Syndecan	domain
EB_dh	PF09459.5	gi|15922927|ref|NP_378596.1|	-	9.7e-05	21.9	0.1	0.00011	21.6	0.1	1.1	1	0	0	1	1	1	1	Ethylbenzene	dehydrogenase
EB_dh	PF09459.5	gi|15922928|ref|NP_378597.1|	-	0.0005	19.6	0.9	0.0013	18.2	0.6	1.7	1	1	0	1	1	1	1	Ethylbenzene	dehydrogenase
Tad	PF13400.1	gi|15922928|ref|NP_378597.1|	-	0.6	10.1	2.4	1.1	9.3	1.7	1.4	1	0	0	1	1	1	0	Putative	Flp	pilus-assembly	TadE/G-like
COX2	PF00116.15	gi|15922929|ref|NP_378598.1|	-	7.6e-10	38.6	3.0	8.9e-09	35.2	2.1	2.3	1	1	0	1	1	1	1	Cytochrome	C	oxidase	subunit	II,	periplasmic	domain
COX1	PF00115.15	gi|15922930|ref|NP_378599.1|	-	7.6e-62	209.3	55.2	7.6e-62	209.3	38.2	1.9	1	1	0	2	2	2	2	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
DDE_Tnp_1_assoc	PF13808.1	gi|15922931|ref|NP_378600.1|	-	0.0014	18.2	0.1	0.012	15.3	0.1	2.1	1	1	0	1	1	1	1	DDE_Tnp_1-associated
HTH_Tnp_Tc3_2	PF01498.13	gi|15922931|ref|NP_378600.1|	-	0.0052	16.8	0.1	0.0067	16.4	0.0	1.2	1	0	0	1	1	1	1	Transposase
DEAD_assoc	PF08494.6	gi|15922931|ref|NP_378600.1|	-	0.0077	15.9	0.2	0.01	15.6	0.1	1.1	1	0	0	1	1	1	1	DEAD/H	associated
Citrate_ly_lig	PF08218.6	gi|15922931|ref|NP_378600.1|	-	0.012	15.1	0.1	0.012	15.0	0.1	1.2	1	0	0	1	1	1	0	Citrate	lyase	ligase	C-terminal	domain
Arg_repressor	PF01316.16	gi|15922931|ref|NP_378600.1|	-	0.42	10.2	3.4	0.44	10.1	1.1	1.8	2	0	0	2	2	2	0	Arginine	repressor,	DNA	binding	domain
CARDB	PF07705.6	gi|15922932|ref|NP_378601.1|	-	0.088	12.8	1.5	0.2	11.7	0.4	1.8	2	0	0	2	2	2	0	CARDB
FtsH_ext	PF06480.10	gi|15922932|ref|NP_378601.1|	-	0.17	12.0	5.3	0.26	11.4	3.6	1.4	1	1	0	1	1	1	0	FtsH	Extracellular
DUF3139	PF11337.3	gi|15922932|ref|NP_378601.1|	-	7.4	6.9	10.9	1	9.7	0.4	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3139)
Fer4_5	PF12801.2	gi|15922933|ref|NP_378602.1|	-	2.1e-06	27.4	5.9	1.3e-05	24.8	1.4	4.5	6	0	0	6	6	6	2	4Fe-4S	binding	domain
UcrQ	PF02939.11	gi|15922933|ref|NP_378602.1|	-	0.01	15.6	0.1	0.022	14.5	0.0	1.5	1	0	0	1	1	1	1	UcrQ	family
DUF3180	PF11377.3	gi|15922933|ref|NP_378602.1|	-	0.054	13.3	0.4	0.054	13.3	0.3	2.0	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3180)
YL1_C	PF08265.6	gi|15922935|ref|NP_378604.1|	-	0.14	11.7	0.0	0.24	10.9	0.0	1.4	1	0	0	1	1	1	0	YL1	nuclear	protein	C-terminal	domain
CBS	PF00571.23	gi|15922936|ref|NP_378605.1|	-	1.8e-32	110.8	3.5	9.4e-11	41.3	0.0	5.5	4	1	0	4	4	4	4	CBS	domain
Fer4_10	PF13237.1	gi|15922936|ref|NP_378605.1|	-	5.4e-09	35.7	14.2	1e-08	34.8	9.8	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|15922936|ref|NP_378605.1|	-	1e-07	31.8	15.6	1.9e-07	31.0	10.8	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|15922936|ref|NP_378605.1|	-	2e-07	30.5	14.8	0.00051	19.8	1.8	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|15922936|ref|NP_378605.1|	-	2.1e-07	30.6	16.1	5.4e-07	29.3	11.2	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|15922936|ref|NP_378605.1|	-	1.2e-06	28.7	18.4	2.7e-06	27.6	12.8	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|15922936|ref|NP_378605.1|	-	1.1e-05	24.7	22.9	0.00065	19.2	6.2	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|15922936|ref|NP_378605.1|	-	1.2e-05	25.4	18.0	2.7e-05	24.3	12.4	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|15922936|ref|NP_378605.1|	-	1.3e-05	24.7	24.1	0.014	15.2	5.2	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|15922936|ref|NP_378605.1|	-	0.011	16.4	11.8	0.032	14.9	2.0	2.7	2	0	0	2	2	2	0	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.2	gi|15922936|ref|NP_378605.1|	-	0.016	15.5	6.3	0.016	15.5	4.3	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_11	PF13247.1	gi|15922936|ref|NP_378605.1|	-	0.024	14.5	7.8	1.1	9.1	0.4	2.4	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|15922936|ref|NP_378605.1|	-	0.034	14.4	17.4	8.8	6.7	12.1	2.5	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|15922936|ref|NP_378605.1|	-	0.21	12.0	18.5	0.16	12.4	3.5	2.6	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|15922936|ref|NP_378605.1|	-	0.22	12.0	21.1	0.27	11.8	4.8	2.8	1	1	1	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_3	PF12798.2	gi|15922936|ref|NP_378605.1|	-	0.38	11.4	23.6	0.26	11.9	6.7	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
ABM	PF03992.11	gi|15922937|ref|NP_378606.1|	-	6.7e-17	61.3	0.0	8.3e-17	61.0	0.0	1.1	1	0	0	1	1	1	1	Antibiotic	biosynthesis	monooxygenase
MFS_1	PF07690.11	gi|15922939|ref|NP_378608.1|	-	1.6e-39	135.6	44.8	7.4e-39	133.4	28.8	2.6	2	1	0	2	2	2	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|15922939|ref|NP_378608.1|	-	3.8e-09	35.6	0.5	3.8e-09	35.6	0.4	3.6	1	1	2	4	4	4	2	Sugar	(and	other)	transporter
OATP	PF03137.15	gi|15922939|ref|NP_378608.1|	-	0.00071	17.7	11.2	0.02	12.9	0.5	3.3	2	1	1	3	3	3	3	Organic	Anion	Transporter	Polypeptide	(OATP)	family
Caps_synth_CapC	PF14102.1	gi|15922939|ref|NP_378608.1|	-	0.0053	16.8	0.2	0.0053	16.8	0.1	4.1	5	1	0	5	5	5	1	Capsule	biosynthesis	CapC
HMA	PF00403.21	gi|15922940|ref|NP_378609.1|	-	5.5e-09	36.0	0.3	7.8e-09	35.5	0.2	1.3	1	0	0	1	1	1	1	Heavy-metal-associated	domain
DNA_pol3_delta2	PF13177.1	gi|15922940|ref|NP_378609.1|	-	0.03	14.0	0.4	0.034	13.8	0.3	1.1	1	0	0	1	1	1	0	DNA	polymerase	III,	delta	subunit
ADH_N	PF08240.7	gi|15922941|ref|NP_378610.1|	-	6.4e-29	99.9	0.9	1.4e-28	98.7	0.1	2.0	3	0	0	3	3	3	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|15922941|ref|NP_378610.1|	-	4.6e-24	84.4	0.5	1.2e-23	83.1	0.1	1.8	2	0	0	2	2	2	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|15922941|ref|NP_378610.1|	-	2.5e-08	34.8	0.0	5.1e-08	33.8	0.0	1.5	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
TrkA_C	PF02080.16	gi|15922941|ref|NP_378610.1|	-	0.0029	17.1	0.0	13	5.4	0.0	4.0	3	1	1	4	4	4	1	TrkA-C	domain
SIS_2	PF13580.1	gi|15922941|ref|NP_378610.1|	-	0.0073	16.0	0.0	0.047	13.4	0.0	2.1	2	0	0	2	2	2	1	SIS	domain
NAD_binding_10	PF13460.1	gi|15922941|ref|NP_378610.1|	-	0.015	15.3	0.1	0.023	14.7	0.1	1.3	1	0	0	1	1	1	0	NADH(P)-binding
Pyr_redox	PF00070.22	gi|15922941|ref|NP_378610.1|	-	0.019	15.3	0.1	1.7	9.1	0.0	2.7	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
AlaDh_PNT_C	PF01262.16	gi|15922941|ref|NP_378610.1|	-	0.069	12.7	0.2	0.12	11.9	0.1	1.4	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
TENA_THI-4	PF03070.11	gi|15922942|ref|NP_378611.1|	-	3.1e-43	147.9	0.3	4.6e-43	147.4	0.2	1.2	1	0	0	1	1	1	1	TENA/THI-4/PQQC	family
Haem_oxygenas_2	PF14518.1	gi|15922942|ref|NP_378611.1|	-	0.036	14.2	0.0	0.084	13.0	0.0	1.6	1	0	0	1	1	1	0	Iron-containing	redox	enzyme
Ta0938	PF11494.3	gi|15922943|ref|NP_378612.1|	-	7.4e-56	186.7	6.7	8.1e-56	186.6	4.6	1.0	1	0	0	1	1	1	1	Ta0938
MttA_Hcf106	PF02416.11	gi|15922944|ref|NP_378613.1|	-	1.7e-10	39.8	9.4	1.7e-09	36.6	6.5	2.0	1	1	0	1	1	1	1	mttA/Hcf106	family
DUF4446	PF14584.1	gi|15922944|ref|NP_378613.1|	-	0.00069	19.4	1.6	0.00086	19.1	1.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4446)
DUF3573	PF12097.3	gi|15922944|ref|NP_378613.1|	-	0.0076	14.8	2.2	0.008	14.8	1.5	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3573)
DUF4391	PF14335.1	gi|15922944|ref|NP_378613.1|	-	0.014	14.7	4.7	0.015	14.6	3.2	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4391)
Cauli_AT	PF03233.8	gi|15922944|ref|NP_378613.1|	-	0.03	14.0	1.2	0.033	13.9	0.8	1.2	1	0	0	1	1	1	0	Aphid	transmission	protein
CHD5	PF04420.9	gi|15922944|ref|NP_378613.1|	-	0.034	13.8	4.0	0.045	13.4	2.8	1.2	1	0	0	1	1	1	0	CHD5-like	protein
Ax_dynein_light	PF10211.4	gi|15922944|ref|NP_378613.1|	-	0.042	13.6	9.5	0.045	13.5	6.6	1.1	1	0	0	1	1	1	0	Axonemal	dynein	light	chain
YvrJ	PF12841.2	gi|15922944|ref|NP_378613.1|	-	0.064	12.5	1.2	0.14	11.4	0.9	1.6	1	0	0	1	1	1	0	YvrJ	protein	family
MgsA_C	PF12002.3	gi|15922944|ref|NP_378613.1|	-	0.069	12.8	0.1	0.081	12.6	0.0	1.1	1	0	0	1	1	1	0	MgsA	AAA+	ATPase	C	terminal
FemAB	PF02388.11	gi|15922944|ref|NP_378613.1|	-	0.069	11.8	5.0	0.068	11.8	3.5	1.0	1	0	0	1	1	1	0	FemAB	family
DUF607	PF04678.8	gi|15922944|ref|NP_378613.1|	-	0.074	12.9	0.6	0.066	13.1	0.4	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF607
L_lactis_ph-MCP	PF06673.6	gi|15922944|ref|NP_378613.1|	-	0.089	11.5	2.8	0.11	11.2	2.0	1.1	1	0	0	1	1	1	0	Lactococcus	lactis	bacteriophage	major	capsid	protein
AAA_23	PF13476.1	gi|15922944|ref|NP_378613.1|	-	0.11	12.8	8.3	0.11	12.8	5.7	1.1	1	0	0	1	1	1	0	AAA	domain
SseC	PF04888.7	gi|15922944|ref|NP_378613.1|	-	0.11	11.7	6.4	0.1	11.8	4.4	1.1	1	0	0	1	1	1	0	Secretion	system	effector	C	(SseC)	like	family
DUF1492	PF07374.6	gi|15922944|ref|NP_378613.1|	-	0.13	12.4	2.2	0.17	11.9	1.5	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1492)
Fzo_mitofusin	PF04799.8	gi|15922944|ref|NP_378613.1|	-	0.14	11.5	5.7	0.17	11.2	4.0	1.2	1	0	0	1	1	1	0	fzo-like	conserved	region
LMBR1	PF04791.11	gi|15922944|ref|NP_378613.1|	-	0.17	10.4	0.3	0.19	10.2	0.2	1.1	1	0	0	1	1	1	0	LMBR1-like	membrane	protein
HSBP1	PF06825.7	gi|15922944|ref|NP_378613.1|	-	0.21	11.1	5.0	0.42	10.2	3.4	1.5	1	1	0	1	1	1	0	Heat	shock	factor	binding	protein	1
Atg14	PF10186.4	gi|15922944|ref|NP_378613.1|	-	0.4	9.5	8.7	0.42	9.4	6.0	1.0	1	0	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
DUF4140	PF13600.1	gi|15922944|ref|NP_378613.1|	-	0.42	11.0	4.4	0.61	10.5	3.1	1.3	1	0	0	1	1	1	0	N-terminal	domain	of	unknown	function	(DUF4140)
DUF3373	PF11853.3	gi|15922944|ref|NP_378613.1|	-	0.48	8.8	9.7	0.54	8.7	6.7	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3373)
PKI	PF02827.11	gi|15922944|ref|NP_378613.1|	-	0.49	10.5	2.5	0.68	10.0	1.8	1.4	1	0	0	1	1	1	0	cAMP-dependent	protein	kinase	inhibitor
DUF2203	PF09969.4	gi|15922944|ref|NP_378613.1|	-	0.55	10.4	3.4	0.71	10.1	2.4	1.1	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2203)
DUF948	PF06103.6	gi|15922944|ref|NP_378613.1|	-	1.1	9.1	5.5	2.3	8.1	1.4	2.1	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
Phage_GPO	PF05929.6	gi|15922944|ref|NP_378613.1|	-	1.2	8.3	6.0	1.3	8.2	4.2	1.1	1	0	0	1	1	1	0	Phage	capsid	scaffolding	protein	(GPO)	serine	peptidase
DUF4363	PF14276.1	gi|15922944|ref|NP_378613.1|	-	1.7	8.3	7.7	2.4	7.8	2.6	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4363)
MerR-DNA-bind	PF09278.6	gi|15922944|ref|NP_378613.1|	-	1.9	8.9	9.1	4	7.9	6.3	1.5	1	1	0	1	1	1	0	MerR,	DNA	binding
BRI3BP	PF14965.1	gi|15922944|ref|NP_378613.1|	-	2.6	7.3	5.1	8.2	5.7	3.6	1.8	1	1	0	1	1	1	0	Negative	regulator	of	p53/TP53
ACCA	PF03255.9	gi|15922944|ref|NP_378613.1|	-	2.7	7.5	5.6	3.7	7.1	3.9	1.3	1	0	0	1	1	1	0	Acetyl	co-enzyme	A	carboxylase	carboxyltransferase	alpha	subunit
OPA3	PF07047.7	gi|15922944|ref|NP_378613.1|	-	3.1	7.5	15.3	4.8	6.9	10.6	1.6	1	1	0	1	1	1	0	Optic	atrophy	3	protein	(OPA3)
DUF4404	PF14357.1	gi|15922944|ref|NP_378613.1|	-	4.3	7.8	12.6	5.8	7.3	8.7	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4404)
DUF2681	PF10883.3	gi|15922944|ref|NP_378613.1|	-	8.1	6.7	16.5	2.7e+03	-1.4	11.4	2.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2681)
zinc_ribbon_2	PF13240.1	gi|15922945|ref|NP_378614.1|	-	1.5e-08	33.8	4.0	2.4e-08	33.2	2.8	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|15922945|ref|NP_378614.1|	-	1.8e-08	33.3	5.4	2.7e-08	32.7	3.7	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|15922945|ref|NP_378614.1|	-	2.4e-06	27.2	1.2	4.1e-06	26.5	0.9	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-RanBP	PF00641.13	gi|15922945|ref|NP_378614.1|	-	0.00018	20.5	1.2	0.00027	19.9	0.8	1.2	1	0	0	1	1	1	1	Zn-finger	in	Ran	binding	protein	and	others
zf-tcix	PF14952.1	gi|15922945|ref|NP_378614.1|	-	0.00061	19.0	3.2	0.00094	18.4	2.2	1.2	1	0	0	1	1	1	1	Putative	treble-clef,	zinc-finger,	Zn-binding
DUF2116	PF09889.4	gi|15922945|ref|NP_378614.1|	-	0.0086	15.8	0.4	0.019	14.7	0.3	1.6	1	0	0	1	1	1	1	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
UPF0547	PF10571.4	gi|15922945|ref|NP_378614.1|	-	0.011	15.4	3.7	0.036	13.7	2.7	1.8	1	1	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
stn_TNFRSF12A	PF12191.3	gi|15922945|ref|NP_378614.1|	-	0.071	13.1	0.1	0.13	12.3	0.1	1.4	1	0	0	1	1	1	0	Tumour	necrosis	factor	receptor	stn_TNFRSF12A_TNFR	domain
Nudix_N_2	PF14803.1	gi|15922945|ref|NP_378614.1|	-	0.16	11.7	1.6	1.6	8.5	0.1	2.3	2	0	0	2	2	2	0	Nudix	N-terminal
DUF2321	PF10083.4	gi|15922945|ref|NP_378614.1|	-	0.19	11.2	1.3	0.84	9.1	0.9	2.1	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2321)
DUF608	PF04685.8	gi|15922946|ref|NP_378615.1|	-	1.8e-79	267.1	0.0	2.3e-79	266.7	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF608
GBA2_N	PF12215.3	gi|15922946|ref|NP_378615.1|	-	9.7e-50	169.4	0.0	1.5e-49	168.7	0.0	1.3	1	0	0	1	1	1	1	beta-Glucocerebrosidase	2	N	terminal
Bac_rhamnosid	PF05592.6	gi|15922946|ref|NP_378615.1|	-	0.0023	16.2	0.1	0.0033	15.7	0.0	1.1	1	0	0	1	1	1	1	Bacterial	alpha-L-rhamnosidase
Glyco_hydro_52	PF03512.8	gi|15922946|ref|NP_378615.1|	-	0.058	11.9	0.8	0.12	10.9	0.5	1.5	1	1	0	1	1	1	0	Glycosyl	hydrolase	family	52
GDE_C	PF06202.9	gi|15922946|ref|NP_378615.1|	-	0.1	11.3	0.6	1.2	7.7	0.4	2.2	1	1	0	1	1	1	0	Amylo-alpha-1,6-glucosidase
MFS_1	PF07690.11	gi|15922947|ref|NP_378616.1|	-	6.4e-17	61.2	40.4	4.7e-09	35.4	11.1	2.0	2	0	0	2	2	2	2	Major	Facilitator	Superfamily
DUF423	PF04241.10	gi|15922947|ref|NP_378616.1|	-	0.016	15.1	0.4	0.016	15.1	0.3	2.8	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF423)
Pro-kuma_activ	PF09286.6	gi|15922948|ref|NP_378617.1|	-	1.5e-21	76.9	0.0	2.3e-21	76.3	0.0	1.3	1	0	0	1	1	1	1	Pro-kumamolisin,	activation	domain
Peptidase_S8	PF00082.17	gi|15922948|ref|NP_378617.1|	-	0.017	14.2	0.3	0.029	13.5	0.2	1.4	1	0	0	1	1	1	0	Subtilase	family
FR47	PF08445.5	gi|15922949|ref|NP_378618.1|	-	1.7e-29	101.3	0.1	3.4e-29	100.4	0.1	1.5	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_1	PF00583.19	gi|15922949|ref|NP_378618.1|	-	1.5e-10	40.9	0.0	2.9e-10	40.0	0.0	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|15922949|ref|NP_378618.1|	-	2e-07	31.0	0.0	4.5e-07	29.9	0.0	1.6	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|15922949|ref|NP_378618.1|	-	4.6e-06	26.7	0.0	1.6e-05	25.0	0.0	1.8	1	1	1	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.1	gi|15922949|ref|NP_378618.1|	-	0.0014	18.5	0.0	0.0022	17.8	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.1	gi|15922949|ref|NP_378618.1|	-	0.0024	18.0	0.0	0.0053	16.9	0.0	1.6	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|15922949|ref|NP_378618.1|	-	0.0031	17.3	0.0	0.0071	16.2	0.0	1.8	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
GNAT_acetyltran	PF12746.2	gi|15922949|ref|NP_378618.1|	-	0.045	12.5	0.0	0.08	11.7	0.0	1.4	1	0	0	1	1	1	0	GNAT	acetyltransferase
DUF1602	PF07673.9	gi|15922950|ref|NP_378619.1|	-	4e-13	48.5	0.1	6.1e-13	47.9	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1602)
PaREP1	PF05942.6	gi|15922951|ref|NP_378620.1|	-	5.2e-19	68.2	0.0	8.6e-19	67.5	0.0	1.3	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
Thermopsin	PF05317.6	gi|15922953|ref|NP_378622.1|	-	3.3e-75	252.4	31.9	3.3e-75	252.4	22.1	4.3	4	1	0	4	4	4	1	Thermopsin
DUF973	PF06157.6	gi|15922954|ref|NP_378623.1|	-	1.1e-05	24.5	28.5	2e-05	23.7	19.8	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
Cortexin	PF11057.3	gi|15922954|ref|NP_378623.1|	-	0.33	10.5	1.7	0.81	9.3	1.2	1.6	1	0	0	1	1	1	0	Cortexin	of	kidney
DUF515	PF04415.7	gi|15922955|ref|NP_378624.1|	-	0.2	9.8	1.9	0.3	9.3	1.3	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF515)
MFS_1	PF07690.11	gi|15922956|ref|NP_378625.1|	-	3.2e-25	88.5	44.6	3.2e-25	88.5	30.9	2.0	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|15922956|ref|NP_378625.1|	-	2.3e-22	79.1	36.0	2.9e-19	68.9	6.8	2.2	1	1	0	2	2	2	2	Sugar	(and	other)	transporter
Glucos_trans_II	PF14264.1	gi|15922957|ref|NP_378626.1|	-	0.00048	19.2	3.4	0.00054	19.0	2.4	1.1	1	0	0	1	1	1	1	Glucosyl	transferase	GtrII
TraL	PF07178.6	gi|15922957|ref|NP_378626.1|	-	0.49	10.4	3.0	0.36	10.8	0.8	1.7	1	1	1	2	2	2	0	TraL	protein
Afaf	PF15339.1	gi|15922957|ref|NP_378626.1|	-	5	6.6	6.0	12	5.3	0.8	2.0	1	1	0	2	2	2	0	Acrosome	formation-associated	factor
HEPN	PF05168.9	gi|15922958|ref|NP_378627.1|	-	1.5e-26	92.5	0.5	1.7e-26	92.4	0.4	1.0	1	0	0	1	1	1	1	HEPN	domain
DUF3588	PF12140.3	gi|15922958|ref|NP_378627.1|	-	0.07	13.2	0.1	0.086	12.9	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3588)
DUF3024	PF11225.3	gi|15922958|ref|NP_378627.1|	-	0.12	12.3	0.1	0.33	10.8	0.0	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3024)
HAD_2	PF13419.1	gi|15922960|ref|NP_378629.1|	-	5.6e-17	62.5	0.1	3.6e-16	59.8	0.0	1.9	1	1	1	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|15922960|ref|NP_378629.1|	-	0.00051	19.6	0.0	0.001	18.7	0.0	1.6	1	0	0	1	1	1	1	HAD-hyrolase-like
Hydrolase	PF00702.21	gi|15922960|ref|NP_378629.1|	-	0.002	18.5	0.0	0.012	16.0	0.0	2.2	2	1	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.2	gi|15922960|ref|NP_378629.1|	-	0.026	14.6	0.1	0.11	12.5	0.0	1.8	1	1	1	2	2	2	0	haloacid	dehalogenase-like	hydrolase
Hydrolase_6	PF13344.1	gi|15922960|ref|NP_378629.1|	-	0.11	12.4	0.0	0.51	10.2	0.0	2.1	3	0	0	3	3	3	0	Haloacid	dehalogenase-like	hydrolase
DUF1700	PF08006.6	gi|15922961|ref|NP_378630.1|	-	0.00042	19.6	5.7	0.0006	19.1	4.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1700)
DUF4234	PF14018.1	gi|15922961|ref|NP_378630.1|	-	0.006	16.2	3.5	1.1	8.9	0.8	2.3	1	1	1	2	2	2	2	Domain	of	unknown	function	(DUF4234)
MS_channel	PF00924.13	gi|15922961|ref|NP_378630.1|	-	0.24	10.6	7.2	0.11	11.7	3.1	1.8	2	0	0	2	2	2	0	Mechanosensitive	ion	channel
Tetraspannin	PF00335.15	gi|15922961|ref|NP_378630.1|	-	2.2	7.4	10.2	2.8	7.1	7.0	1.1	1	0	0	1	1	1	0	Tetraspanin	family
PQQ_2	PF13360.1	gi|15922962|ref|NP_378631.1|	-	5.7e-09	35.7	4.4	4.8e-05	22.9	0.2	5.1	3	1	1	4	4	4	2	PQQ-like	domain
NHL	PF01436.16	gi|15922962|ref|NP_378631.1|	-	0.00086	19.1	38.9	0.02	14.8	0.1	9.0	13	1	0	13	13	13	4	NHL	repeat
PQQ	PF01011.16	gi|15922962|ref|NP_378631.1|	-	0.00093	18.6	7.6	37	4.1	0.0	7.2	7	1	0	8	8	8	0	PQQ	enzyme	repeat
Lactonase	PF10282.4	gi|15922962|ref|NP_378631.1|	-	0.0092	15.0	15.0	0.019	14.0	0.1	4.9	3	2	3	6	6	6	2	Lactonase,	7-bladed	beta-propeller
Rifin_STEVOR	PF02009.11	gi|15922962|ref|NP_378631.1|	-	0.39	10.3	2.8	0.58	9.7	1.9	1.2	1	0	0	1	1	1	0	Rifin/stevor	family
SUKH-4	PF14435.1	gi|15922962|ref|NP_378631.1|	-	0.52	9.9	2.4	1.6	8.3	0.0	2.9	4	0	0	4	4	4	0	SUKH-4	immunity	protein
TMEM154	PF15102.1	gi|15922962|ref|NP_378631.1|	-	1.8	8.2	7.4	3	7.5	5.1	1.3	1	0	0	1	1	1	0	TMEM154	protein	family
Thermopsin	PF05317.6	gi|15922965|ref|NP_378634.1|	-	7e-79	264.4	24.5	7e-79	264.4	17.0	2.9	2	1	1	3	3	3	1	Thermopsin
Big_3_4	PF13754.1	gi|15922965|ref|NP_378634.1|	-	2e-06	28.0	2.6	0.84	10.0	0.0	4.8	4	0	0	4	4	4	2	Bacterial	Ig-like	domain	(group	3)
PKD	PF00801.15	gi|15922965|ref|NP_378634.1|	-	0.00013	21.6	8.5	0.11	12.2	0.5	3.8	3	0	0	3	3	3	2	PKD	domain
SprB	PF13573.1	gi|15922965|ref|NP_378634.1|	-	0.0062	16.1	17.6	0.0081	15.7	0.2	4.5	4	0	0	4	4	4	2	SprB	repeat
DUF1056	PF06341.6	gi|15922966|ref|NP_378635.1|	-	3.8	7.6	11.1	14	5.8	7.0	2.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1056)
Oxidored_q5_N	PF01059.12	gi|15922967|ref|NP_378636.1|	-	0.55	10.1	5.5	1.2	9.0	3.8	1.6	1	1	0	1	1	1	0	NADH-ubiquinone	oxidoreductase	chain	4,	amino	terminus
DUF1206	PF06724.6	gi|15922968|ref|NP_378637.1|	-	0.38	10.5	3.2	0.56	9.9	0.3	2.0	2	0	0	2	2	2	0	Domain	of	Unknown	Function	(DUF1206)
DUF4153	PF13687.1	gi|15922971|ref|NP_378640.1|	-	0.35	10.3	10.6	2	7.8	7.3	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4153)
SdpI	PF13630.1	gi|15922971|ref|NP_378640.1|	-	3.7	7.3	6.0	10	5.8	0.1	2.4	2	1	0	2	2	2	0	SdpI/YhfL	protein	family
DUF387	PF04079.11	gi|15922973|ref|NP_378642.1|	-	0.00094	18.5	0.2	0.002	17.5	0.1	1.7	1	1	0	1	1	1	1	Putative	transcriptional	regulators	(Ypuh-like)
Cas_Cas02710	PF09670.5	gi|15922973|ref|NP_378642.1|	-	0.051	12.2	0.2	0.4	9.2	0.0	2.0	2	0	0	2	2	2	0	CRISPR-associated	protein	(Cas_Cas02710)
DUF911	PF06023.7	gi|15922974|ref|NP_378643.1|	-	9.3e-112	372.9	0.0	1e-111	372.8	0.0	1.0	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF911)
PDDEXK_1	PF12705.2	gi|15922974|ref|NP_378643.1|	-	6e-08	32.3	0.0	1.6e-07	30.9	0.0	1.6	1	1	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
Cas_Cas4	PF01930.12	gi|15922974|ref|NP_378643.1|	-	2.2e-07	30.9	0.0	1.1e-05	25.4	0.0	2.2	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF83
Dna2	PF08696.6	gi|15922974|ref|NP_378643.1|	-	0.063	12.5	0.0	0.089	12.0	0.0	1.2	1	0	0	1	1	1	0	DNA	replication	factor	Dna2
Cas_Cas1	PF01867.11	gi|15922975|ref|NP_378644.1|	-	2.8e-56	190.6	0.0	4e-56	190.1	0.0	1.2	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas1
CRISPR_Cas2	PF09827.4	gi|15922976|ref|NP_378645.1|	-	1.6e-18	66.6	0.2	1.8e-18	66.4	0.1	1.1	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas2
Ribosomal_L30	PF00327.15	gi|15922976|ref|NP_378645.1|	-	0.047	13.2	0.0	0.079	12.5	0.0	1.4	1	0	0	1	1	1	0	Ribosomal	protein	L30p/L7e
PaaX_C	PF08223.6	gi|15922976|ref|NP_378645.1|	-	0.098	12.3	0.0	0.13	11.9	0.0	1.2	1	0	0	1	1	1	0	PaaX-like	protein	C-terminal	domain
Cas_Cas4	PF01930.12	gi|15922977|ref|NP_378646.1|	-	3.1e-30	105.2	2.5	3.5e-30	105.0	1.8	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF83
PDDEXK_1	PF12705.2	gi|15922977|ref|NP_378646.1|	-	3.4e-08	33.1	1.0	1.1e-06	28.2	0.3	2.0	1	1	1	2	2	2	2	PD-(D/E)XK	nuclease	superfamily
CZB	PF13682.1	gi|15922977|ref|NP_378646.1|	-	0.079	13.1	0.0	0.16	12.1	0.0	1.5	1	0	0	1	1	1	0	Chemoreceptor	zinc-binding	domain
Cas_Csa5	PF09702.5	gi|15922980|ref|NP_378649.1|	-	8.1e-50	167.2	0.8	1.2e-49	166.7	0.5	1.2	1	0	0	1	1	1	1	CRISPR-associated	protein	(Cas_Csa5)
WaaY	PF06176.6	gi|15922980|ref|NP_378649.1|	-	0.078	12.1	1.9	6.1	5.9	0.1	2.2	1	1	1	2	2	2	0	Lipopolysaccharide	core	biosynthesis	protein	(WaaY)
DevR	PF01905.11	gi|15922981|ref|NP_378650.1|	-	1.2e-77	260.3	0.0	1.5e-77	260.1	0.0	1.0	1	0	0	1	1	1	1	CRISPR-associated	negative	auto-regulator	DevR/Csa2
Cas_Cas5d	PF09704.5	gi|15922982|ref|NP_378651.1|	-	1.7e-24	86.7	0.1	2e-24	86.4	0.0	1.0	1	0	0	1	1	1	1	CRISPR-associated	protein	(Cas_Cas5)
DEAD	PF00270.24	gi|15922983|ref|NP_378652.1|	-	8.4e-14	51.4	0.1	6.1e-13	48.6	0.0	2.2	2	1	0	2	2	2	1	DEAD/DEAH	box	helicase
ResIII	PF04851.10	gi|15922983|ref|NP_378652.1|	-	9.4e-07	28.8	0.0	3.9e-06	26.8	0.0	2.0	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.26	gi|15922983|ref|NP_378652.1|	-	1.4e-06	28.0	0.1	7.9e-06	25.6	0.0	2.4	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
AAA_19	PF13245.1	gi|15922983|ref|NP_378652.1|	-	0.0027	17.4	0.0	0.026	14.2	0.0	2.2	2	0	0	2	2	2	1	Part	of	AAA	domain
Oxidored_nitro	PF00148.14	gi|15922983|ref|NP_378652.1|	-	0.0038	15.9	0.1	0.0057	15.3	0.0	1.2	1	0	0	1	1	1	1	Nitrogenase	component	1	type	Oxidoreductase
RuvB_N	PF05496.7	gi|15922983|ref|NP_378652.1|	-	0.005	15.9	0.0	0.0088	15.1	0.0	1.3	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_22	PF13401.1	gi|15922983|ref|NP_378652.1|	-	0.0075	16.4	0.0	0.053	13.6	0.0	2.3	2	1	0	2	2	2	1	AAA	domain
IstB_IS21	PF01695.12	gi|15922983|ref|NP_378652.1|	-	0.0091	15.4	0.0	0.02	14.3	0.0	1.6	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
IF-2B	PF01008.12	gi|15922983|ref|NP_378652.1|	-	0.027	13.4	0.1	3.1	6.7	0.0	2.5	2	1	1	3	3	3	0	Initiation	factor	2	subunit	family
AAA	PF00004.24	gi|15922983|ref|NP_378652.1|	-	0.031	14.4	0.1	0.25	11.5	0.0	2.3	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
UPF0079	PF02367.12	gi|15922983|ref|NP_378652.1|	-	0.031	13.8	0.0	0.078	12.6	0.0	1.6	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
GCR1_C	PF12550.3	gi|15922983|ref|NP_378652.1|	-	0.055	13.3	0.9	2.8	7.8	0.0	3.0	2	1	0	2	2	2	0	Transcriptional	activator	of	glycolytic	enzymes
DUF3343	PF11823.3	gi|15922983|ref|NP_378652.1|	-	0.093	12.0	0.0	0.24	10.7	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3343)
ABC_tran	PF00005.22	gi|15922983|ref|NP_378652.1|	-	0.12	12.7	0.0	0.72	10.1	0.0	2.2	2	0	0	2	2	2	0	ABC	transporter
HD	PF01966.17	gi|15922984|ref|NP_378653.1|	-	0.0012	18.7	0.0	0.0018	18.2	0.0	1.4	1	0	0	1	1	1	1	HD	domain
DUF3242	PF11586.3	gi|15922984|ref|NP_378653.1|	-	0.12	11.9	0.1	0.24	10.9	0.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3242)
DUF2276	PF10040.4	gi|15922986|ref|NP_378655.1|	-	1.8e-21	76.5	0.0	2.9e-21	75.9	0.0	1.3	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2276)