# --- full sequence ---- --- best 1 domain ---- --- domain number estimation ---- # target name accession query name accession E-value score bias E-value score bias exp reg clu ov env dom rep inc description of target #------------------- ---------- -------------------- ---------- --------- ------ ----- --------- ------ ----- --- --- --- --- --- --- --- --- --------------------- Clp_N PF02861.20 gi|15920164|ref|NP_375833.1| - 0.13 12.5 0.6 12 6.2 0.0 2.8 3 0 0 3 3 3 0 Clp amino terminal domain, pathogenicity island component DUF16 PF01519.16 gi|15920164|ref|NP_375833.1| - 0.13 12.7 2.2 0.35 11.4 0.1 2.5 3 0 0 3 3 3 0 Protein of unknown function DUF16 PIN PF01850.21 gi|15920165|ref|NP_375834.1| - 2.3e-08 34.6 0.2 2.7e-08 34.4 0.2 1.1 1 0 0 1 1 1 1 PIN domain Mistic PF11458.8 gi|15920167|ref|NP_375836.1| - 0.0016 18.3 1.6 0.0024 17.8 1.6 1.3 1 0 0 1 1 1 1 Membrane-integrating protein Mistic DnaI_N PF07319.11 gi|15920167|ref|NP_375836.1| - 0.028 15.1 1.1 0.033 14.8 1.1 1.2 1 0 0 1 1 1 0 Primosomal protein DnaI N-terminus DUF1932 PF09130.11 gi|15920167|ref|NP_375836.1| - 0.048 13.6 0.0 0.2 11.6 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF1932) DUF5616 PF18481.1 gi|15920167|ref|NP_375836.1| - 0.061 13.7 0.1 0.13 12.6 0.1 1.5 1 1 1 2 2 2 0 Domain of unknown function (DUF5616) NTP_transf_2 PF01909.23 gi|15920168|ref|NP_375837.1| - 0.0029 17.8 0.3 0.0035 17.6 0.3 1.2 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|15920168|ref|NP_375837.1| - 0.044 13.9 0.1 0.052 13.6 0.1 1.2 1 0 0 1 1 1 0 Polymerase beta, Nucleotidyltransferase HEPN PF05168.14 gi|15920170|ref|NP_375839.1| - 8.4e-06 25.9 0.8 9.2e-06 25.8 0.8 1.0 1 0 0 1 1 1 1 HEPN domain Peptidase_S9 PF00326.21 gi|15920171|ref|NP_375840.1| - 2.4e-44 151.3 0.0 3.5e-44 150.8 0.0 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_1 PF00561.20 gi|15920171|ref|NP_375840.1| - 0.017 14.8 0.0 1.2 8.7 0.0 2.2 1 1 1 2 2 2 0 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|15920171|ref|NP_375840.1| - 0.02 14.2 0.0 0.033 13.4 0.0 1.2 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Peptidase_S28 PF05577.12 gi|15920171|ref|NP_375840.1| - 0.18 10.6 0.0 0.27 10.0 0.0 1.1 1 0 0 1 1 1 0 Serine carboxypeptidase S28 DEAD PF00270.29 gi|15920172|ref|NP_375841.1| - 1.8e-20 73.4 0.1 3.6e-20 72.4 0.1 1.5 1 0 0 1 1 1 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|15920172|ref|NP_375841.1| - 1.8e-15 57.2 0.1 8.9e-15 55.0 0.0 2.2 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|15920172|ref|NP_375841.1| - 8.5e-09 35.6 0.2 1.5e-08 34.8 0.2 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_19 PF13245.6 gi|15920172|ref|NP_375841.1| - 0.0054 17.1 0.0 0.03 14.7 0.0 2.1 1 1 1 2 2 2 1 AAA domain PhoH PF02562.16 gi|15920172|ref|NP_375841.1| - 0.073 12.5 0.1 0.2 11.1 0.1 1.6 1 0 0 1 1 1 0 PhoH-like protein zf-C2H2 PF00096.26 gi|15920174|ref|NP_375843.1| - 8.4e-05 22.8 2.7 0.04 14.4 0.6 2.4 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 gi|15920174|ref|NP_375843.1| - 0.00093 19.8 3.1 0.093 13.6 0.4 2.5 2 0 0 2 2 2 2 C2H2-type zinc finger Zn-ribbon_8 PF09723.10 gi|15920174|ref|NP_375843.1| - 0.00093 19.3 0.2 0.002 18.2 0.2 1.6 1 0 0 1 1 1 1 Zinc ribbon domain UPF0167 PF03691.14 gi|15920174|ref|NP_375843.1| - 0.032 14.0 0.1 0.047 13.5 0.1 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0167) zf-C2HE PF16278.5 gi|15920174|ref|NP_375843.1| - 0.14 12.7 1.5 0.19 12.2 0.1 1.9 2 0 0 2 2 2 0 C2HE / C2H2 / C2HC zinc-binding finger zf-C2H2_9 PF16293.5 gi|15920174|ref|NP_375843.1| - 0.23 11.3 4.1 7 6.6 0.1 2.3 1 1 1 2 2 2 0 C2H2 type zinc-finger (1 copy) zf-BED PF02892.15 gi|15920174|ref|NP_375843.1| - 0.45 10.6 3.8 3.3 7.8 0.4 2.4 1 1 1 2 2 2 0 BED zinc finger zf-H2C2_2 PF13465.6 gi|15920174|ref|NP_375843.1| - 0.58 10.7 0.3 0.58 10.7 0.3 2.9 1 1 2 3 3 3 0 Zinc-finger double domain CRISPR_Cas6 PF10040.9 gi|15920175|ref|NP_375844.1| - 1.1e-05 26.0 0.0 1.5e-05 25.6 0.0 1.2 1 0 0 1 1 1 1 CRISPR-associated endoribonuclease Cas6 Cas_Cas6 PF01881.16 gi|15920175|ref|NP_375844.1| - 0.0017 18.9 0.3 0.0022 18.5 0.3 1.2 1 0 0 1 1 1 1 CRISPR associated protein Cas6 Popeye PF04831.13 gi|15920175|ref|NP_375844.1| - 0.08 13.1 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 Popeye protein conserved region DUF2247 PF10004.9 gi|15920177|ref|NP_375846.1| - 0.0024 17.6 0.8 0.0038 17.0 0.8 1.4 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2247) RAMPs PF03787.15 gi|15920178|ref|NP_375847.1| - 3.6e-21 76.2 0.0 7.7e-21 75.1 0.0 1.5 1 1 0 1 1 1 1 RAMP superfamily RAMPs PF03787.15 gi|15920179|ref|NP_375848.1| - 9.7e-25 87.9 0.1 2.1e-24 86.7 0.1 1.6 1 1 0 1 1 1 1 RAMP superfamily RAMPs PF03787.15 gi|15920181|ref|NP_375850.1| - 1.1e-10 42.0 0.0 1.4e-10 41.5 0.0 1.3 1 1 0 1 1 1 1 RAMP superfamily HD PF01966.22 gi|15920182|ref|NP_375851.1| - 2.7e-08 34.1 3.0 8.5e-08 32.5 0.5 2.8 2 1 1 3 3 3 1 HD domain SLATT_1 PF18181.1 gi|15920182|ref|NP_375851.1| - 0.036 14.0 0.7 0.28 11.1 0.1 2.3 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 1 MutS_III PF05192.18 gi|15920182|ref|NP_375851.1| - 0.15 12.2 0.9 3.5 7.8 0.0 2.8 2 1 0 2 2 2 0 MutS domain III TF_Zn_Ribbon PF08271.12 gi|15920182|ref|NP_375851.1| - 0.19 11.3 1.7 0.41 10.2 1.7 1.6 1 0 0 1 1 1 0 TFIIB zinc-binding Syntaxin_2 PF14523.6 gi|15920182|ref|NP_375851.1| - 8.4 6.8 7.4 3.6 8.0 0.6 3.1 3 1 0 3 3 3 0 Syntaxin-like protein RAMPs PF03787.15 gi|15920183|ref|NP_375852.1| - 1.5e-10 41.5 0.0 5.1e-10 39.8 0.0 1.7 1 1 0 1 1 1 1 RAMP superfamily Cas_Cmr3 PF09700.10 gi|15920183|ref|NP_375852.1| - 0.0051 16.3 0.0 0.12 11.7 0.0 2.0 2 0 0 2 2 2 2 CRISPR-associated protein (Cas_Cmr3) RAMPs PF03787.15 gi|15920185|ref|NP_375854.1| - 1.6e-14 54.4 1.4 2.6e-14 53.8 1.4 1.4 1 1 0 1 1 1 1 RAMP superfamily Cas_Cmr3 PF09700.10 gi|15920185|ref|NP_375854.1| - 0.035 13.5 0.0 0.039 13.4 0.0 1.1 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Cmr3) PaREP1 PF05942.11 gi|15920186|ref|NP_375855.1| - 1.5e-25 89.4 0.3 2.1e-25 88.9 0.3 1.2 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family MazE_antitoxin PF04014.18 gi|15920187|ref|NP_375856.1| - 1.2e-11 44.3 3.1 1.6e-11 43.8 3.1 1.2 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin AbrB-like PF14250.6 gi|15920187|ref|NP_375856.1| - 0.02 14.9 0.2 0.028 14.5 0.2 1.2 1 0 0 1 1 1 0 AbrB-like transcriptional regulator CDC48_N PF02359.18 gi|15920187|ref|NP_375856.1| - 0.037 14.2 0.3 0.053 13.7 0.3 1.3 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), N-terminal domain DUF1905 PF08922.11 gi|15920187|ref|NP_375856.1| - 0.061 13.4 0.2 0.09 12.9 0.2 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF1905) PrlF_antitoxin PF15937.5 gi|15920187|ref|NP_375856.1| - 0.07 13.6 0.0 0.096 13.1 0.0 1.2 1 0 0 1 1 1 0 prlF antitoxin for toxin YhaV_toxin DUF2118 PF09891.9 gi|15920187|ref|NP_375856.1| - 0.12 12.3 1.0 0.14 12.1 0.5 1.3 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2118) PIN PF01850.21 gi|15920188|ref|NP_375857.1| - 4.8e-08 33.5 0.1 5.5e-08 33.4 0.1 1.1 1 0 0 1 1 1 1 PIN domain SinI PF08671.10 gi|15920188|ref|NP_375857.1| - 0.54 10.1 2.2 25 4.8 0.0 2.8 4 0 0 4 4 4 0 Anti-repressor SinI Cas_DxTHG PF09455.10 gi|15920190|ref|NP_375859.1| - 4.1e-38 131.9 4.6 5.1e-38 131.6 4.6 1.1 1 0 0 1 1 1 1 CRISPR-associated (Cas) DxTHG family Ribonuc_2-5A PF06479.12 gi|15920190|ref|NP_375859.1| - 0.12 12.6 1.9 42 4.3 0.0 3.5 3 0 0 3 3 3 0 Ribonuclease 2-5A Cas_Cas4 PF01930.17 gi|15920194|ref|NP_375863.1| - 1.3e-25 90.4 0.4 1.4e-25 90.2 0.4 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF83 PDDEXK_1 PF12705.7 gi|15920194|ref|NP_375863.1| - 4.3e-07 30.1 0.3 4.9e-07 29.9 0.3 1.1 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily Cas_Cas02710 PF09670.10 gi|15920195|ref|NP_375864.1| - 0.085 11.6 0.0 0.12 11.2 0.0 1.2 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Cas02710) DUF440 PF04269.12 gi|15920195|ref|NP_375864.1| - 0.12 12.7 0.0 0.25 11.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF440 PTS_EIIC PF02378.18 gi|15920196|ref|NP_375865.1| - 0.44 9.5 5.9 0.36 9.8 0.4 2.2 1 1 1 2 2 2 0 Phosphotransferase system, EIIC CRISPR_Cas2 PF09827.9 gi|15920198|ref|NP_375867.1| - 8.2e-20 70.8 0.4 1.1e-19 70.4 0.4 1.1 1 0 0 1 1 1 1 CRISPR associated protein Cas2 PPO1_DWL PF12142.8 gi|15920198|ref|NP_375867.1| - 0.024 14.4 0.5 0.046 13.5 0.2 1.6 1 1 1 2 2 2 0 Polyphenol oxidase middle domain Cas_Cas1 PF01867.16 gi|15920199|ref|NP_375868.1| - 6.1e-56 189.6 0.0 7.4e-56 189.4 0.0 1.0 1 0 0 1 1 1 1 CRISPR associated protein Cas1 Orn_Arg_deC_N PF02784.16 gi|15920199|ref|NP_375868.1| - 0.028 13.8 0.0 0.058 12.7 0.0 1.6 1 1 0 1 1 1 0 Pyridoxal-dependent decarboxylase, pyridoxal binding domain Csa1 PF06023.12 gi|15920200|ref|NP_375869.1| - 5.2e-119 396.9 0.0 5.8e-119 396.8 0.0 1.0 1 0 0 1 1 1 1 CRISPR-associated exonuclease Csa1 Cas_Csa5 PF09702.10 gi|15920201|ref|NP_375870.1| - 2.5e-05 24.5 0.2 0.00044 20.5 0.2 2.1 1 1 0 1 1 1 1 CRISPR-associated protein (Cas_Csa5) Phage_int_SAM_4 PF13495.6 gi|15920201|ref|NP_375870.1| - 0.0016 18.9 0.0 1.1 9.7 0.0 2.2 2 0 0 2 2 2 2 Phage integrase, N-terminal SAM-like domain DevR PF01905.16 gi|15920202|ref|NP_375871.1| - 4.6e-82 275.1 0.4 5.4e-82 274.9 0.4 1.0 1 0 0 1 1 1 1 CRISPR-associated negative auto-regulator DevR/Csa2 ATP13 PF12921.7 gi|15920203|ref|NP_375872.1| - 0.008 16.0 0.1 0.14 12.0 0.0 2.3 2 0 0 2 2 2 1 Mitochondrial ATPase expression Cas_Cas5d PF09704.10 gi|15920203|ref|NP_375872.1| - 0.0098 15.8 0.0 0.021 14.7 0.0 1.5 1 1 0 1 1 1 1 CRISPR-associated protein (Cas_Cas5) RAMPs PF03787.15 gi|15920203|ref|NP_375872.1| - 0.047 13.7 0.0 0.056 13.5 0.0 1.2 1 0 0 1 1 1 0 RAMP superfamily Urocanase PF01175.18 gi|15920204|ref|NP_375873.1| - 0.15 11.7 0.0 0.26 10.9 0.0 1.4 1 0 0 1 1 1 0 Urocanase Rossmann-like domain DEAD PF00270.29 gi|15920205|ref|NP_375874.1| - 2.4e-08 34.0 0.0 1.7e-07 31.2 0.0 2.3 2 1 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|15920205|ref|NP_375874.1| - 9.1e-08 32.4 0.7 2.5e-07 31.0 0.7 1.8 1 0 0 1 1 1 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|15920205|ref|NP_375874.1| - 7.1e-07 29.4 0.1 3.4e-06 27.2 0.0 2.2 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit PHM7_cyt PF14703.6 gi|15920205|ref|NP_375874.1| - 0.53 10.5 5.1 0.87 9.8 0.2 2.3 2 0 0 2 2 2 0 Cytosolic domain of 10TM putative phosphate transporter HD_6 PF18019.1 gi|15920206|ref|NP_375875.1| - 0.00077 19.6 0.0 0.0048 17.0 0.0 1.9 1 1 0 1 1 1 1 HD domain HD PF01966.22 gi|15920206|ref|NP_375875.1| - 0.0024 18.1 0.2 0.0049 17.1 0.2 1.8 1 1 0 1 1 1 1 HD domain Band_7 PF01145.25 gi|15920206|ref|NP_375875.1| - 0.0096 15.9 0.0 0.012 15.6 0.0 1.2 1 0 0 1 1 1 1 SPFH domain / Band 7 family Cas6_N PF17952.1 gi|15920207|ref|NP_375876.1| - 1.2e-38 131.9 1.1 1.8e-38 131.3 1.1 1.3 1 0 0 1 1 1 1 Cas6 N-terminal domain CRISPR_Cas6 PF10040.9 gi|15920207|ref|NP_375876.1| - 1.4e-16 60.9 0.0 2.8e-16 59.9 0.0 1.5 1 0 0 1 1 1 1 CRISPR-associated endoribonuclease Cas6 Cas_Cas6 PF01881.16 gi|15920207|ref|NP_375876.1| - 0.00095 19.7 0.1 0.0033 18.0 0.0 1.8 2 0 0 2 2 2 1 CRISPR associated protein Cas6 PIN PF01850.21 gi|15920209|ref|NP_375878.1| - 3.4e-16 59.8 0.2 3.8e-16 59.7 0.2 1.0 1 0 0 1 1 1 1 PIN domain Sigma70_r1_1 PF03979.14 gi|15920209|ref|NP_375878.1| - 0.022 14.8 0.6 1.3 9.1 0.1 2.4 2 1 0 2 2 2 0 Sigma-70 factor, region 1.1 MazE_antitoxin PF04014.18 gi|15920210|ref|NP_375879.1| - 1.2e-10 41.1 2.8 1.2e-10 41.1 2.8 1.6 2 0 0 2 2 2 1 Antidote-toxin recognition MazE, bacterial antitoxin PrlF_antitoxin PF15937.5 gi|15920210|ref|NP_375879.1| - 0.0001 22.7 0.2 0.00016 22.0 0.1 1.3 1 1 0 1 1 1 1 prlF antitoxin for toxin YhaV_toxin MraZ PF02381.18 gi|15920210|ref|NP_375879.1| - 0.0011 18.9 0.0 0.0018 18.3 0.0 1.5 1 1 0 1 1 1 1 MraZ protein, putative antitoxin-like DUF104 PF01954.16 gi|15920210|ref|NP_375879.1| - 0.0035 17.8 10.9 0.014 15.8 10.9 1.9 1 1 0 1 1 1 1 Protein of unknown function DUF104 AbrB-like PF14250.6 gi|15920210|ref|NP_375879.1| - 0.0043 17.1 0.0 0.0066 16.5 0.0 1.3 1 0 0 1 1 1 1 AbrB-like transcriptional regulator CTP-dep_RFKase PF01982.16 gi|15920210|ref|NP_375879.1| - 0.053 13.6 0.3 0.13 12.3 0.1 1.7 2 0 0 2 2 2 0 Domain of unknown function DUF120 DUF433 PF04255.14 gi|15920210|ref|NP_375879.1| - 0.1 12.5 0.2 0.32 10.9 0.2 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF433) WG_beta_rep PF14903.6 gi|15920210|ref|NP_375879.1| - 0.49 10.7 4.3 16 5.9 0.5 3.1 2 1 1 3 3 3 0 WG containing repeat NTP_transf_2 PF01909.23 gi|15920211|ref|NP_375880.1| - 7.1e-12 45.5 0.2 1.4e-11 44.5 0.2 1.5 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|15920211|ref|NP_375880.1| - 6.8e-10 38.9 0.1 1.3e-09 38.0 0.1 1.5 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase DUF294 PF03445.13 gi|15920211|ref|NP_375880.1| - 0.001 18.9 0.0 0.0037 17.1 0.0 1.8 2 0 0 2 2 2 1 Putative nucleotidyltransferase DUF294 DNA_pol_B_palm PF14792.6 gi|15920211|ref|NP_375880.1| - 0.016 15.4 0.0 0.027 14.7 0.0 1.3 1 0 0 1 1 1 0 DNA polymerase beta palm HEPN PF05168.14 gi|15920213|ref|NP_375882.1| - 4e-12 46.3 0.7 4.4e-12 46.2 0.7 1.0 1 0 0 1 1 1 1 HEPN domain Polbeta PF18765.1 gi|15920214|ref|NP_375883.1| - 9.1e-07 28.9 1.0 1.1e-06 28.7 1.0 1.2 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase NTP_transf_2 PF01909.23 gi|15920214|ref|NP_375883.1| - 1e-06 28.9 0.6 1.4e-06 28.5 0.6 1.2 1 0 0 1 1 1 1 Nucleotidyltransferase domain ADH_N PF08240.12 gi|15920215|ref|NP_375884.1| - 1.8e-22 79.3 0.0 3.3e-22 78.4 0.0 1.4 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|15920215|ref|NP_375884.1| - 3.1e-22 78.9 0.4 5.1e-22 78.2 0.4 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|15920215|ref|NP_375884.1| - 3.1e-10 41.2 0.1 5.1e-10 40.5 0.1 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase TrkA_N PF02254.18 gi|15920215|ref|NP_375884.1| - 0.0013 19.0 1.0 0.0022 18.2 1.0 1.5 1 0 0 1 1 1 1 TrkA-N domain Methyltransf_31 PF13847.6 gi|15920215|ref|NP_375884.1| - 0.0077 16.0 0.1 0.012 15.4 0.1 1.5 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|15920215|ref|NP_375884.1| - 0.0092 16.7 0.0 0.016 15.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain ThiF PF00899.21 gi|15920215|ref|NP_375884.1| - 0.085 12.2 0.1 0.13 11.6 0.1 1.2 1 0 0 1 1 1 0 ThiF family Methyltransf_12 PF08242.12 gi|15920215|ref|NP_375884.1| - 0.086 13.6 0.0 0.15 12.8 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain ADH_N PF08240.12 gi|15920216|ref|NP_375885.1| - 0.00078 19.3 0.0 0.001 18.9 0.0 1.2 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain FeS_assembly_P PF01883.19 gi|15920217|ref|NP_375886.1| - 2.2e-08 34.1 0.0 3.8e-08 33.4 0.0 1.4 1 0 0 1 1 1 1 Iron-sulfur cluster assembly protein DUF1577 PF07614.11 gi|15920217|ref|NP_375886.1| - 0.0043 16.2 0.1 0.0052 15.9 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1577) TSNR_N PF04705.12 gi|15920217|ref|NP_375886.1| - 0.008 16.2 0.0 0.017 15.2 0.0 1.6 1 0 0 1 1 1 1 Thiostrepton-resistance methylase, N terminus OrfB_IS605 PF01385.19 gi|15920218|ref|NP_375887.1| - 5e-36 123.5 0.6 7.3e-36 123.0 0.6 1.2 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|15920218|ref|NP_375887.1| - 1.1e-19 70.1 0.0 2.2e-19 69.2 0.0 1.5 1 0 0 1 1 1 1 Putative transposase DNA-binding domain RuvX PF03652.15 gi|15920218|ref|NP_375887.1| - 3.6e-06 27.4 0.0 6.1e-06 26.7 0.0 1.3 1 0 0 1 1 1 1 Holliday junction resolvase VWD PF00094.25 gi|15920218|ref|NP_375887.1| - 0.068 13.4 0.4 0.18 12.1 0.3 1.7 1 1 1 2 2 2 0 von Willebrand factor type D domain Y1_Tnp PF01797.16 gi|15920220|ref|NP_375889.1| - 3.6e-42 143.3 0.0 4.1e-42 143.1 0.0 1.0 1 0 0 1 1 1 1 Transposase IS200 like GAD PF02938.14 gi|15920220|ref|NP_375889.1| - 0.046 14.0 0.2 5.2 7.4 0.0 2.1 2 0 0 2 2 2 0 GAD domain BRCT PF00533.26 gi|15920220|ref|NP_375889.1| - 0.093 13.1 0.0 0.16 12.4 0.0 1.6 1 1 0 1 1 1 0 BRCA1 C Terminus (BRCT) domain Amidohydro_2 PF04909.14 gi|15920221|ref|NP_375890.1| - 1.6e-20 74.1 0.1 2e-20 73.7 0.1 1.0 1 0 0 1 1 1 1 Amidohydrolase Sulfotransfer_3 PF13469.6 gi|15920221|ref|NP_375890.1| - 0.033 14.6 0.0 0.053 13.9 0.0 1.4 1 0 0 1 1 1 0 Sulfotransferase family Ald_Xan_dh_C2 PF02738.18 gi|15920222|ref|NP_375891.1| - 4.3e-26 91.5 0.0 4.9e-26 91.3 0.0 1.0 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase DDE_Tnp_IS1 PF03400.13 gi|15920223|ref|NP_375892.1| - 9.7e-12 45.4 1.1 9.7e-12 45.4 1.1 1.7 2 0 0 2 2 2 1 IS1 transposase DDE_Tnp_IS66 PF03050.14 gi|15920223|ref|NP_375892.1| - 3.2e-06 26.8 1.3 7.4e-06 25.6 1.3 1.6 1 1 0 1 1 1 1 Transposase IS66 family Zn_Tnp_IS1 PF03811.13 gi|15920223|ref|NP_375892.1| - 0.00038 20.1 2.1 0.00088 19.0 2.1 1.6 1 0 0 1 1 1 1 InsA N-terminal domain zf-Mss51 PF13824.6 gi|15920223|ref|NP_375892.1| - 0.0033 17.5 1.3 0.0075 16.3 1.3 1.6 1 0 0 1 1 1 1 Zinc-finger of mitochondrial splicing suppressor 51 Zn-ribbon_8 PF09723.10 gi|15920223|ref|NP_375892.1| - 0.011 15.8 5.2 0.78 9.9 0.7 2.3 2 0 0 2 2 2 0 Zinc ribbon domain DUF2225 PF09986.9 gi|15920223|ref|NP_375892.1| - 0.012 15.4 1.1 0.012 15.4 1.1 1.9 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2225) HTH_23 PF13384.6 gi|15920223|ref|NP_375892.1| - 0.046 13.5 1.0 4.6 7.1 0.0 3.1 3 0 0 3 3 3 0 Homeodomain-like domain Lar_restr_allev PF14354.6 gi|15920223|ref|NP_375892.1| - 0.049 14.0 2.2 0.067 13.6 1.3 1.7 2 0 0 2 2 1 0 Restriction alleviation protein Lar Zn_Tnp_IS1595 PF12760.7 gi|15920223|ref|NP_375892.1| - 0.061 13.3 4.7 0.12 12.3 4.7 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain HTH_Tnp_IS630 PF01710.16 gi|15920223|ref|NP_375892.1| - 0.068 13.2 1.1 0.37 10.9 0.0 2.5 1 1 1 2 2 2 0 Transposase HTH_17 PF12728.7 gi|15920223|ref|NP_375892.1| - 0.091 13.0 0.1 11 6.3 0.0 2.6 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_38 PF13936.6 gi|15920223|ref|NP_375892.1| - 0.1 12.4 0.1 0.26 11.1 0.1 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain DUF1289 PF06945.13 gi|15920223|ref|NP_375892.1| - 0.1 12.4 0.4 0.21 11.4 0.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) TF_Zn_Ribbon PF08271.12 gi|15920223|ref|NP_375892.1| - 0.15 11.6 1.6 2.2 7.8 1.6 2.2 1 1 1 2 2 2 0 TFIIB zinc-binding zf-C2H2 PF00096.26 gi|15920223|ref|NP_375892.1| - 0.37 11.4 2.0 1.4 9.5 2.0 2.1 1 0 0 1 1 1 0 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 gi|15920223|ref|NP_375892.1| - 4.5 7.9 7.2 0.84 10.2 1.0 2.5 2 0 0 2 2 2 0 Zinc-finger double domain Ald_Xan_dh_C2 PF02738.18 gi|15920224|ref|NP_375893.1| - 2.2e-86 290.5 0.0 2.7e-86 290.2 0.0 1.0 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 gi|15920224|ref|NP_375893.1| - 2e-25 89.3 0.0 3.4e-25 88.5 0.0 1.4 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ECH_1 PF00378.20 gi|15920225|ref|NP_375894.1| - 3.8e-63 213.1 0.0 4.3e-63 212.9 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|15920225|ref|NP_375894.1| - 3e-36 125.6 0.0 3.1e-31 109.1 0.0 2.3 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase TctB PF07331.11 gi|15920226|ref|NP_375895.1| - 0.00031 21.0 1.2 0.00036 20.8 1.2 1.1 1 0 0 1 1 1 1 Tripartite tricarboxylate transporter TctB family AMP-binding PF00501.28 gi|15920227|ref|NP_375896.1| - 1e-82 278.0 0.0 1.3e-82 277.7 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|15920227|ref|NP_375896.1| - 6.7e-23 81.5 0.9 1.3e-22 80.5 0.9 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain HTH_10 PF04967.12 gi|15920228|ref|NP_375897.1| - 1.7e-21 75.8 0.1 4e-21 74.5 0.1 1.7 1 0 0 1 1 1 1 HTH DNA binding domain HTH_24 PF13412.6 gi|15920228|ref|NP_375897.1| - 5.1e-05 22.7 1.8 0.00051 19.5 0.2 3.3 3 1 0 3 3 3 1 Winged helix-turn-helix DNA-binding MerR PF00376.23 gi|15920228|ref|NP_375897.1| - 0.0028 17.4 0.0 0.0074 16.0 0.0 1.8 1 0 0 1 1 1 1 MerR family regulatory protein HTH_5 PF01022.20 gi|15920228|ref|NP_375897.1| - 0.0041 16.9 0.0 0.016 15.1 0.0 2.0 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_17 PF12728.7 gi|15920228|ref|NP_375897.1| - 0.033 14.4 0.0 0.066 13.4 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain MerR_1 PF13411.6 gi|15920228|ref|NP_375897.1| - 0.085 13.0 1.3 0.59 10.3 0.0 2.6 3 0 0 3 3 3 0 MerR HTH family regulatory protein HTH_8 PF02954.19 gi|15920228|ref|NP_375897.1| - 0.13 12.1 0.2 2.9 7.7 0.1 2.5 1 1 1 2 2 2 0 Bacterial regulatory protein, Fis family UbiD PF01977.16 gi|15920229|ref|NP_375898.1| - 3.5e-106 355.5 0.0 4.1e-106 355.3 0.0 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ADH_N PF08240.12 gi|15920230|ref|NP_375899.1| - 2.6e-31 107.8 0.2 4.4e-31 107.0 0.2 1.4 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|15920230|ref|NP_375899.1| - 1.3e-21 76.9 0.0 2.2e-21 76.2 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|15920230|ref|NP_375899.1| - 1e-19 71.9 0.0 1.6e-19 71.3 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase TrkA_N PF02254.18 gi|15920230|ref|NP_375899.1| - 0.021 15.1 0.1 0.083 13.2 0.1 1.9 2 0 0 2 2 2 0 TrkA-N domain MFS_1 PF07690.16 gi|15920231|ref|NP_375900.1| - 9.9e-21 74.0 45.4 9.9e-21 74.0 45.4 2.2 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|15920231|ref|NP_375900.1| - 1.4e-20 73.6 30.0 1.4e-13 50.6 7.1 2.2 1 1 1 2 2 2 2 Sugar (and other) transporter CrgA PF06781.12 gi|15920231|ref|NP_375900.1| - 0.33 11.0 0.1 0.33 11.0 0.1 3.4 4 1 0 4 4 4 0 Cell division protein CrgA DUF3842 PF12953.7 gi|15920231|ref|NP_375900.1| - 0.56 10.6 5.9 0.41 11.0 2.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF3842) DDE_Tnp_1 PF01609.21 gi|15920233|ref|NP_375902.1| - 7.6e-12 45.3 0.2 3.3e-11 43.3 0.0 2.0 1 1 1 2 2 2 1 Transposase DDE domain Aminoglyc_resit PF10706.9 gi|15920233|ref|NP_375902.1| - 0.033 13.9 0.0 0.058 13.1 0.0 1.3 1 0 0 1 1 1 0 Aminoglycoside-2''-adenylyltransferase B12-binding PF02310.19 gi|15920235|ref|NP_375904.1| - 1.2e-20 73.8 0.2 8.1e-20 71.1 0.1 2.4 3 0 0 3 3 3 1 B12 binding domain Radical_SAM PF04055.21 gi|15920235|ref|NP_375904.1| - 1.2e-16 61.5 0.0 2.5e-16 60.5 0.0 1.6 1 0 0 1 1 1 1 Radical SAM superfamily MCD_N PF17408.2 gi|15920235|ref|NP_375904.1| - 0.025 14.7 0.0 0.07 13.3 0.0 1.7 1 0 0 1 1 1 0 Malonyl-CoA decarboxylase N-terminal domain Fer4_14 PF13394.6 gi|15920235|ref|NP_375904.1| - 0.037 14.1 0.1 0.11 12.6 0.1 1.8 1 0 0 1 1 1 0 4Fe-4S single cluster domain DAGK_cat PF00781.24 gi|15920235|ref|NP_375904.1| - 0.19 11.3 0.3 2.7 7.6 0.3 2.4 1 1 0 1 1 1 0 Diacylglycerol kinase catalytic domain Lactamase_B PF00753.27 gi|15920236|ref|NP_375905.1| - 1.4e-24 87.2 0.0 2.1e-24 86.6 0.0 1.2 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|15920236|ref|NP_375905.1| - 0.0013 18.3 0.0 0.0034 16.9 0.0 1.7 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Ish1 PF10281.9 gi|15920236|ref|NP_375905.1| - 0.038 14.3 0.2 25 5.3 0.0 3.3 3 0 0 3 3 3 0 Putative stress-responsive nuclear envelope protein Vir_act_alpha_C PF10400.9 gi|15920236|ref|NP_375905.1| - 0.17 12.6 0.1 0.45 11.2 0.2 1.8 2 1 0 2 2 2 0 Virulence activator alpha C-term SBP56 PF05694.11 gi|15920238|ref|NP_375907.1| - 1.8e-205 683.1 0.0 2e-205 682.9 0.0 1.0 1 0 0 1 1 1 1 56kDa selenium binding protein (SBP56) DUF1264 PF06884.11 gi|15920238|ref|NP_375907.1| - 0.14 11.8 0.0 0.23 11.1 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1264) Topo_Zn_Ribbon PF08272.11 gi|15920238|ref|NP_375907.1| - 0.17 11.6 0.2 0.33 10.6 0.2 1.5 1 0 0 1 1 1 0 Topoisomerase I zinc-ribbon-like Rad54_N PF08658.10 gi|15920238|ref|NP_375907.1| - 0.23 11.6 0.1 0.43 10.7 0.1 1.3 1 0 0 1 1 1 0 Rad54 N terminal 4HBT PF03061.22 gi|15920240|ref|NP_375909.1| - 1e-15 57.9 0.0 1.3e-15 57.5 0.0 1.1 1 0 0 1 1 1 1 Thioesterase superfamily 4HBT_3 PF13622.6 gi|15920240|ref|NP_375909.1| - 0.00053 20.3 0.0 0.00058 20.2 0.0 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily AMP-binding PF00501.28 gi|15920241|ref|NP_375910.1| - 2.5e-95 319.5 0.0 3.1e-95 319.3 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|15920241|ref|NP_375910.1| - 6.9e-18 65.4 0.0 1.4e-17 64.5 0.0 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain HpaB_N PF11794.8 gi|15920242|ref|NP_375911.1| - 6.2e-82 275.3 0.3 8.1e-82 274.9 0.3 1.1 1 0 0 1 1 1 1 4-hydroxyphenylacetate 3-hydroxylase N terminal HpaB PF03241.13 gi|15920242|ref|NP_375911.1| - 3.7e-51 173.1 0.0 4.8e-51 172.7 0.0 1.2 1 0 0 1 1 1 1 4-hydroxyphenylacetate 3-hydroxylase C terminal Acyl-CoA_dh_M PF02770.19 gi|15920242|ref|NP_375911.1| - 0.00013 22.1 0.0 0.00027 21.1 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Aldedh PF00171.22 gi|15920243|ref|NP_375912.1| - 2.8e-149 497.6 0.1 3.1e-149 497.4 0.1 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Sugar_tr PF00083.24 gi|15920244|ref|NP_375913.1| - 2e-47 162.1 25.8 2.4e-47 161.8 25.8 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|15920244|ref|NP_375913.1| - 7.3e-41 140.3 41.8 7.3e-41 140.3 41.8 1.8 1 1 1 2 2 2 1 Major Facilitator Superfamily MFS_4 PF06779.14 gi|15920244|ref|NP_375913.1| - 1.8e-08 34.1 10.2 1.8e-08 34.1 10.2 2.2 2 1 1 3 3 3 1 Uncharacterised MFS-type transporter YbfB MFS_2 PF13347.6 gi|15920244|ref|NP_375913.1| - 6.3 5.2 49.6 0.35 9.4 10.1 4.0 1 1 3 4 4 4 0 MFS/sugar transport protein Acyl-CoA_dh_1 PF00441.24 gi|15920245|ref|NP_375914.1| - 3.8e-27 95.3 0.0 5.3e-27 94.9 0.0 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|15920245|ref|NP_375914.1| - 1.4e-19 70.1 0.0 2.2e-19 69.4 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|15920245|ref|NP_375914.1| - 8.4e-11 42.3 0.0 1.2e-10 41.7 0.0 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|15920245|ref|NP_375914.1| - 8.6e-08 32.8 0.0 1.5e-07 32.0 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain CoA_transf_3 PF02515.17 gi|15920246|ref|NP_375915.1| - 2.7e-96 322.9 0.0 3.5e-96 322.5 0.0 1.2 1 0 0 1 1 1 1 CoA-transferase family III ExbD PF02472.16 gi|15920246|ref|NP_375915.1| - 0.64 10.2 2.1 2.5 8.3 2.1 1.9 1 1 0 1 1 1 0 Biopolymer transport protein ExbD/TolR MaoC_dehydratas PF01575.19 gi|15920247|ref|NP_375916.1| - 7.5e-17 61.0 0.0 1.1e-16 60.5 0.0 1.2 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 gi|15920247|ref|NP_375916.1| - 0.00019 21.6 0.0 0.00026 21.1 0.0 1.5 1 1 0 1 1 1 1 N-terminal half of MaoC dehydratase 4HBT PF03061.22 gi|15920247|ref|NP_375916.1| - 0.024 15.0 0.0 0.04 14.3 0.0 1.4 1 0 0 1 1 1 0 Thioesterase superfamily ECH_1 PF00378.20 gi|15920248|ref|NP_375917.1| - 7e-68 228.6 0.0 1.2e-67 227.9 0.0 1.3 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase 3HCDH_N PF02737.18 gi|15920248|ref|NP_375917.1| - 8e-66 221.3 0.6 1.2e-65 220.8 0.6 1.2 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 gi|15920248|ref|NP_375917.1| - 1.8e-43 147.0 0.0 4.4e-25 88.1 0.0 2.6 2 0 0 2 2 2 2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ECH_2 PF16113.5 gi|15920248|ref|NP_375917.1| - 9.9e-42 143.6 0.1 6.1e-39 134.4 0.0 2.5 2 1 1 3 3 3 2 Enoyl-CoA hydratase/isomerase NAD_binding_2 PF03446.15 gi|15920248|ref|NP_375917.1| - 0.0024 18.1 0.1 0.0064 16.7 0.0 1.8 1 1 1 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase Pyr_redox PF00070.27 gi|15920248|ref|NP_375917.1| - 0.01 16.4 0.0 0.077 13.6 0.0 2.5 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 gi|15920248|ref|NP_375917.1| - 0.033 13.4 0.0 0.064 12.5 0.0 1.5 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase adh_short PF00106.25 gi|15920248|ref|NP_375917.1| - 0.1 12.1 0.0 0.24 10.8 0.0 1.7 2 0 0 2 2 2 0 short chain dehydrogenase NAD_binding_7 PF13241.6 gi|15920248|ref|NP_375917.1| - 0.11 12.9 0.0 0.27 11.7 0.0 1.7 1 0 0 1 1 1 0 Putative NAD(P)-binding Gp58 PF07902.11 gi|15920248|ref|NP_375917.1| - 0.11 10.7 0.1 0.17 10.1 0.1 1.1 1 0 0 1 1 1 0 gp58-like protein 2-Hacid_dh_C PF02826.19 gi|15920248|ref|NP_375917.1| - 0.13 11.6 0.0 0.23 10.8 0.0 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain adh_short_C2 PF13561.6 gi|15920248|ref|NP_375917.1| - 0.19 11.2 0.0 0.38 10.3 0.0 1.5 1 1 0 1 1 1 0 Enoyl-(Acyl carrier protein) reductase ThiF PF00899.21 gi|15920248|ref|NP_375917.1| - 0.22 10.8 0.1 0.38 10.1 0.1 1.3 1 0 0 1 1 1 0 ThiF family adh_short PF00106.25 gi|15920249|ref|NP_375918.1| - 3.4e-50 170.2 0.6 4.8e-50 169.7 0.6 1.1 1 0 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|15920249|ref|NP_375918.1| - 1.7e-48 165.2 0.5 2.1e-48 164.9 0.5 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase KR PF08659.10 gi|15920249|ref|NP_375918.1| - 6.5e-08 32.7 0.2 8.8e-08 32.3 0.2 1.2 1 0 0 1 1 1 1 KR domain PABP PF00658.18 gi|15920249|ref|NP_375918.1| - 0.0047 17.1 0.2 0.019 15.1 0.1 2.0 2 0 0 2 2 2 1 Poly-adenylate binding protein, unique domain IMPDH PF00478.25 gi|15920249|ref|NP_375918.1| - 0.059 12.4 0.3 0.079 11.9 0.3 1.3 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain MCR_gamma PF02240.16 gi|15920249|ref|NP_375918.1| - 0.072 12.3 0.0 0.19 10.9 0.0 1.6 2 0 0 2 2 2 0 Methyl-coenzyme M reductase gamma subunit NAD_binding_7 PF13241.6 gi|15920249|ref|NP_375918.1| - 0.14 12.6 0.2 0.27 11.7 0.1 1.7 2 0 0 2 2 2 0 Putative NAD(P)-binding Abhydrolase_3 PF07859.13 gi|15920250|ref|NP_375919.1| - 1e-69 234.6 0.0 1.2e-69 234.4 0.0 1.0 1 0 0 1 1 1 1 alpha/beta hydrolase fold COesterase PF00135.28 gi|15920250|ref|NP_375919.1| - 1.2e-09 37.6 0.5 3.9e-09 35.9 0.5 1.6 1 1 0 1 1 1 1 Carboxylesterase family Say1_Mug180 PF10340.9 gi|15920250|ref|NP_375919.1| - 6.3e-06 25.3 0.0 8.5e-06 24.9 0.0 1.2 1 0 0 1 1 1 1 Steryl acetyl hydrolase Chlorophyllase2 PF12740.7 gi|15920250|ref|NP_375919.1| - 0.00061 18.8 0.0 0.0011 18.0 0.0 1.4 1 0 0 1 1 1 1 Chlorophyllase enzyme Peptidase_S9 PF00326.21 gi|15920250|ref|NP_375919.1| - 0.011 15.3 0.0 0.017 14.6 0.0 1.3 1 0 0 1 1 1 0 Prolyl oligopeptidase family DUF2974 PF11187.8 gi|15920250|ref|NP_375919.1| - 0.024 14.2 0.0 0.035 13.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2974) Lipase_3 PF01764.25 gi|15920250|ref|NP_375919.1| - 0.19 11.6 0.0 0.33 10.8 0.0 1.3 1 0 0 1 1 1 0 Lipase (class 3) TetR_N PF00440.23 gi|15920251|ref|NP_375920.1| - 7e-15 54.6 0.0 1.1e-14 53.9 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, tetR family COXG PF06240.13 gi|15920253|ref|NP_375922.1| - 3e-35 121.0 0.1 3.3e-35 120.8 0.1 1.0 1 0 0 1 1 1 1 Carbon monoxide dehydrogenase subunit G (CoxG) DUF3211 PF11485.8 gi|15920253|ref|NP_375922.1| - 0.0021 18.3 0.7 0.0025 18.0 0.7 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3211) DUF1189 PF06691.11 gi|15920253|ref|NP_375922.1| - 0.0042 16.7 2.4 0.0046 16.6 2.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1189) ADH_N PF08240.12 gi|15920254|ref|NP_375923.1| - 3.2e-23 81.7 2.0 6.6e-22 77.5 2.0 2.2 1 1 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|15920254|ref|NP_375923.1| - 8.8e-16 58.1 0.0 1.3e-14 54.2 0.0 2.2 1 1 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|15920254|ref|NP_375923.1| - 1.2e-12 49.1 0.1 2.3e-12 48.1 0.0 1.5 2 0 0 2 2 2 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 gi|15920254|ref|NP_375923.1| - 0.00013 21.5 0.1 0.00032 20.2 0.1 1.6 1 1 0 1 1 1 1 Glucose dehydrogenase C-terminus Epimerase PF01370.21 gi|15920254|ref|NP_375923.1| - 0.0047 16.4 0.1 0.0073 15.8 0.1 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 gi|15920254|ref|NP_375923.1| - 0.019 14.1 0.0 1.2 8.1 0.0 2.1 1 1 1 2 2 2 0 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 gi|15920254|ref|NP_375923.1| - 0.075 12.1 0.1 0.11 11.6 0.1 1.3 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein DNA_pol3_delta2 PF13177.6 gi|15920254|ref|NP_375923.1| - 0.14 11.9 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 DNA polymerase III, delta subunit KR PF08659.10 gi|15920254|ref|NP_375923.1| - 0.18 11.7 0.0 0.27 11.1 0.0 1.3 1 0 0 1 1 1 0 KR domain Acyl-CoA_dh_1 PF00441.24 gi|15920255|ref|NP_375924.1| - 2.8e-44 150.9 2.8 4.2e-44 150.4 2.8 1.2 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|15920255|ref|NP_375924.1| - 5.2e-34 117.3 1.0 1.4e-33 115.9 0.2 2.1 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|15920255|ref|NP_375924.1| - 1.7e-26 92.2 0.0 3.1e-26 91.4 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|15920255|ref|NP_375924.1| - 9.7e-22 77.7 0.7 9.7e-22 77.7 0.7 1.6 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain HpaB_N PF11794.8 gi|15920255|ref|NP_375924.1| - 0.00023 20.9 0.2 0.0015 18.3 0.1 2.2 2 1 0 2 2 2 1 4-hydroxyphenylacetate 3-hydroxylase N terminal CbbQ_C PF08406.10 gi|15920255|ref|NP_375924.1| - 0.012 15.8 0.1 0.033 14.4 0.1 1.7 1 1 0 1 1 1 0 CbbQ/NirQ/NorQ C-terminal AMP-binding PF00501.28 gi|15920256|ref|NP_375925.1| - 1.3e-87 294.2 0.0 1.5e-87 294.0 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|15920256|ref|NP_375925.1| - 1.2e-15 58.2 0.0 2.1e-15 57.5 0.0 1.4 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Thiolase_N PF00108.23 gi|15920258|ref|NP_375927.1| - 2.7e-30 105.6 0.0 5.3e-30 104.6 0.0 1.5 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|15920258|ref|NP_375927.1| - 1e-08 34.8 0.1 7.7e-07 28.8 0.0 2.7 2 0 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|15920258|ref|NP_375927.1| - 8.4e-07 28.8 7.2 3e-06 27.0 1.0 2.8 2 1 1 3 3 3 2 Beta-ketoacyl synthase, N-terminal domain ACP_syn_III PF08545.10 gi|15920258|ref|NP_375927.1| - 0.00025 20.8 0.3 0.047 13.5 0.0 2.6 2 0 0 2 2 2 2 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III SpoVAD PF07451.11 gi|15920258|ref|NP_375927.1| - 0.042 12.6 0.2 0.094 11.4 0.0 1.6 2 0 0 2 2 2 0 Stage V sporulation protein AD (SpoVAD) OB_aCoA_assoc PF01796.17 gi|15920259|ref|NP_375928.1| - 7.8e-13 48.2 0.0 1.2e-12 47.7 0.0 1.3 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated DUF35_N PF12172.8 gi|15920259|ref|NP_375928.1| - 9.2e-13 47.8 0.1 2.1e-12 46.7 0.0 1.5 2 0 0 2 2 2 1 Rubredoxin-like zinc ribbon domain (DUF35_N) Hepsin-SRCR PF09272.10 gi|15920259|ref|NP_375928.1| - 0.081 13.4 0.0 0.11 13.0 0.0 1.3 1 0 0 1 1 1 0 Hepsin, SRCR domain HypA PF01155.19 gi|15920259|ref|NP_375928.1| - 0.084 12.9 0.1 0.15 12.1 0.1 1.5 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Auto_anti-p27 PF06677.12 gi|15920259|ref|NP_375928.1| - 0.11 12.7 2.9 0.16 12.1 1.9 1.8 2 1 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) CxC5 PF18718.1 gi|15920259|ref|NP_375928.1| - 0.21 11.7 0.4 0.76 9.9 0.2 1.9 1 1 1 2 2 2 0 CxC5 like cysteine cluster associated with KDZ transposases zf-C2H2_3 PF13878.6 gi|15920259|ref|NP_375928.1| - 0.78 9.6 3.5 0.68 9.8 0.2 2.1 1 1 1 2 2 2 0 zinc-finger of acetyl-transferase ESCO Molybdopterin PF00384.22 gi|15920260|ref|NP_375929.1| - 2.9e-88 296.7 0.0 4e-88 296.3 0.0 1.2 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 gi|15920260|ref|NP_375929.1| - 3.3e-21 75.4 0.0 6.5e-21 74.5 0.0 1.5 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.16 gi|15920260|ref|NP_375929.1| - 2.6e-18 65.8 0.3 2.6e-18 65.8 0.3 2.4 2 0 0 2 2 1 1 Molybdopterin oxidoreductase Fe4S4 domain Fer4 PF00037.27 gi|15920260|ref|NP_375929.1| - 4.8e-11 42.0 19.1 4.4e-06 26.3 3.5 3.6 3 0 0 3 3 3 2 4Fe-4S binding domain NADH-G_4Fe-4S_3 PF10588.9 gi|15920260|ref|NP_375929.1| - 2.1e-10 39.9 0.4 2.1e-10 39.9 0.4 2.1 2 0 0 2 2 1 1 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region Fer2_4 PF13510.6 gi|15920260|ref|NP_375929.1| - 4.7e-10 39.4 0.0 1.1e-09 38.2 0.0 1.6 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_21 PF14697.6 gi|15920260|ref|NP_375929.1| - 2.3e-08 34.0 6.5 2.3e-08 34.0 6.5 3.0 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15920260|ref|NP_375929.1| - 2.4e-06 27.6 19.4 0.00016 21.8 1.8 3.2 3 1 1 4 4 3 3 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15920260|ref|NP_375929.1| - 6.4e-06 26.7 10.8 6.4e-06 26.7 10.8 3.6 2 1 2 4 4 4 2 4Fe-4S dicluster domain Fer2 PF00111.27 gi|15920260|ref|NP_375929.1| - 9.8e-06 25.4 4.0 1.5e-05 24.9 0.2 2.7 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer4_6 PF12837.7 gi|15920260|ref|NP_375929.1| - 2.5e-05 24.2 13.1 0.00027 20.9 3.3 3.3 4 0 0 4 4 3 2 4Fe-4S binding domain TPP_enzyme_M PF00205.22 gi|15920260|ref|NP_375929.1| - 7.7e-05 22.5 0.1 0.22 11.3 0.0 3.3 3 0 0 3 3 3 2 Thiamine pyrophosphate enzyme, central domain Fer4_9 PF13187.6 gi|15920260|ref|NP_375929.1| - 0.00015 21.9 12.5 0.00015 21.9 12.5 3.8 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15920260|ref|NP_375929.1| - 0.00047 21.0 15.8 0.009 16.9 4.0 3.8 3 1 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_2 PF12797.7 gi|15920260|ref|NP_375929.1| - 0.0032 17.5 15.1 0.0083 16.2 5.8 3.4 4 0 0 4 4 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|15920260|ref|NP_375929.1| - 0.0066 16.9 10.8 0.0066 16.9 10.8 3.2 3 1 0 3 3 2 1 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15920260|ref|NP_375929.1| - 0.028 14.9 2.7 0.028 14.9 2.7 3.5 6 0 0 6 6 2 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|15920260|ref|NP_375929.1| - 0.093 13.3 18.0 0.47 11.0 2.9 3.1 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|15920260|ref|NP_375929.1| - 0.54 10.8 11.6 4.1 8.0 2.5 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|15920260|ref|NP_375929.1| - 1.2 10.0 7.2 3 8.7 1.2 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain DUF1641 PF07849.11 gi|15920261|ref|NP_375930.1| - 4.3e-12 45.7 0.2 8e-12 44.8 0.0 1.5 2 0 0 2 2 2 1 Protein of unknown function (DUF1641) FdhD-NarQ PF02634.15 gi|15920262|ref|NP_375931.1| - 1.1e-73 247.9 0.0 1.2e-73 247.7 0.0 1.0 1 0 0 1 1 1 1 FdhD/NarQ family Acyl-CoA_dh_1 PF00441.24 gi|15920263|ref|NP_375932.1| - 3.8e-10 40.2 0.0 4.7e-08 33.4 0.0 2.1 2 0 0 2 2 2 2 Acyl-CoA dehydrogenase, C-terminal domain MaoC_dehydratas PF01575.19 gi|15920264|ref|NP_375933.1| - 6.1e-20 71.0 0.0 7.7e-20 70.7 0.0 1.1 1 0 0 1 1 1 1 MaoC like domain MaoC_dehydrat_N PF13452.6 gi|15920264|ref|NP_375933.1| - 2.3e-06 27.8 0.0 3.4e-06 27.2 0.0 1.3 1 1 0 1 1 1 1 N-terminal half of MaoC dehydratase DUF3157 PF11355.8 gi|15920264|ref|NP_375933.1| - 0.028 14.0 0.0 0.036 13.7 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3157) S1 PF00575.23 gi|15920264|ref|NP_375933.1| - 0.038 14.3 0.3 0.078 13.3 0.1 1.7 1 1 0 1 1 1 0 S1 RNA binding domain Acyl-CoA_dh_N PF02771.16 gi|15920265|ref|NP_375934.1| - 2.2e-27 95.9 0.0 4.3e-27 95.0 0.0 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|15920265|ref|NP_375934.1| - 9.2e-20 70.7 0.0 1.6e-19 69.9 0.0 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_1 PF00441.24 gi|15920265|ref|NP_375934.1| - 1.6e-12 47.9 0.7 7.8e-08 32.7 0.1 2.2 1 1 1 2 2 2 2 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_ox_N PF14749.6 gi|15920265|ref|NP_375934.1| - 0.016 15.7 0.0 0.035 14.7 0.0 1.7 1 1 0 1 1 1 0 Acyl-coenzyme A oxidase N-terminal EamA PF00892.20 gi|15920266|ref|NP_375935.1| - 6.8e-24 84.6 41.0 1e-16 61.3 17.5 2.5 2 1 0 2 2 2 2 EamA-like transporter family DrsE PF02635.15 gi|15920267|ref|NP_375936.1| - 0.00016 22.0 0.0 0.00021 21.6 0.0 1.2 1 0 0 1 1 1 1 DsrE/DsrF-like family DUF5104 PF17117.5 gi|15920267|ref|NP_375936.1| - 0.07 13.6 0.4 0.09 13.2 0.4 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF5104) Oxidored_FMN PF00724.20 gi|15920268|ref|NP_375937.1| - 1.6e-58 198.6 0.0 2.1e-58 198.2 0.0 1.1 1 0 0 1 1 1 1 NADH:flavin oxidoreductase / NADH oxidase family NAD_binding_8 PF13450.6 gi|15920268|ref|NP_375937.1| - 1.1e-08 35.1 0.0 2.7e-08 33.9 0.0 1.7 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 gi|15920268|ref|NP_375937.1| - 3.3e-06 27.6 3.1 0.00034 21.1 0.6 3.4 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 gi|15920268|ref|NP_375937.1| - 5.3e-06 25.9 0.2 4.5e-05 22.8 0.0 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Dus PF01207.17 gi|15920268|ref|NP_375937.1| - 5.9e-06 25.6 0.0 0.00014 21.1 0.0 2.5 2 0 0 2 2 2 1 Dihydrouridine synthase (Dus) DAO PF01266.24 gi|15920268|ref|NP_375937.1| - 4.4e-05 23.2 0.1 0.00023 20.9 0.1 2.1 2 0 0 2 2 2 1 FAD dependent oxidoreductase 3HCDH_N PF02737.18 gi|15920268|ref|NP_375937.1| - 0.00014 21.8 0.0 0.00025 21.0 0.0 1.4 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PcrB PF01884.17 gi|15920268|ref|NP_375937.1| - 0.0032 17.0 1.1 0.021 14.3 0.0 2.7 3 0 0 3 3 3 1 PcrB family Amino_oxidase PF01593.24 gi|15920268|ref|NP_375937.1| - 0.0075 15.6 0.0 0.013 14.9 0.0 1.3 1 0 0 1 1 1 1 Flavin containing amine oxidoreductase FAD_binding_3 PF01494.19 gi|15920268|ref|NP_375937.1| - 0.01 15.1 0.2 0.016 14.5 0.2 1.2 1 0 0 1 1 1 0 FAD binding domain Thi4 PF01946.17 gi|15920268|ref|NP_375937.1| - 0.015 14.6 0.1 0.027 13.7 0.1 1.4 1 0 0 1 1 1 0 Thi4 family AlaDh_PNT_C PF01262.21 gi|15920268|ref|NP_375937.1| - 0.021 14.1 0.0 0.04 13.2 0.0 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Trp_syntA PF00290.20 gi|15920268|ref|NP_375937.1| - 0.029 13.2 0.0 0.051 12.4 0.0 1.3 1 0 0 1 1 1 0 Tryptophan synthase alpha chain HI0933_like PF03486.14 gi|15920268|ref|NP_375937.1| - 0.07 11.8 0.4 0.18 10.5 0.3 1.6 2 0 0 2 2 2 0 HI0933-like protein GIDA PF01134.22 gi|15920268|ref|NP_375937.1| - 0.21 10.7 0.0 0.3 10.1 0.0 1.2 1 0 0 1 1 1 0 Glucose inhibited division protein A Sugar_tr PF00083.24 gi|15920269|ref|NP_375938.1| - 1.5e-47 162.5 27.8 2.5e-31 109.0 11.6 2.1 1 1 0 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.16 gi|15920269|ref|NP_375938.1| - 4.9e-35 121.1 63.9 1.4e-32 113.0 41.6 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily OATP PF03137.20 gi|15920269|ref|NP_375938.1| - 5e-05 21.8 2.1 5e-05 21.8 2.1 2.6 1 1 2 3 3 3 1 Organic Anion Transporter Polypeptide (OATP) family PDR_assoc PF08370.11 gi|15920269|ref|NP_375938.1| - 0.061 13.1 3.8 4.7 7.0 0.4 2.8 2 0 0 2 2 2 0 Plant PDR ABC transporter associated Gp5_OB PF06714.11 gi|15920269|ref|NP_375938.1| - 0.26 11.5 0.0 0.51 10.6 0.0 1.4 1 0 0 1 1 1 0 Gp5 N-terminal OB domain Pyr_redox_2 PF07992.14 gi|15920270|ref|NP_375939.1| - 3.6e-57 193.9 0.0 4.4e-57 193.5 0.0 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|15920270|ref|NP_375939.1| - 1.8e-22 79.7 4.5 4.6e-19 68.8 0.6 2.6 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|15920270|ref|NP_375939.1| - 1.1e-16 60.9 0.4 1.6e-16 60.4 0.4 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Reductase_C PF14759.6 gi|15920270|ref|NP_375939.1| - 8.2e-12 45.5 0.0 1.5e-11 44.7 0.0 1.5 1 0 0 1 1 1 1 Reductase C-terminal GIDA PF01134.22 gi|15920270|ref|NP_375939.1| - 4.4e-05 22.8 3.2 0.32 10.0 0.0 3.2 2 1 1 3 3 3 2 Glucose inhibited division protein A HI0933_like PF03486.14 gi|15920270|ref|NP_375939.1| - 0.00046 19.0 1.8 0.31 9.7 0.0 3.1 2 1 1 3 3 3 1 HI0933-like protein DAO PF01266.24 gi|15920270|ref|NP_375939.1| - 0.0012 18.6 4.7 1.4 8.5 1.7 3.1 2 1 1 3 3 3 2 FAD dependent oxidoreductase NAD_binding_9 PF13454.6 gi|15920270|ref|NP_375939.1| - 0.022 14.8 1.2 11 6.0 0.0 3.1 2 1 1 3 3 3 0 FAD-NAD(P)-binding NAD_binding_7 PF13241.6 gi|15920270|ref|NP_375939.1| - 0.054 13.9 0.1 0.13 12.7 0.1 1.6 1 0 0 1 1 1 0 Putative NAD(P)-binding FAD_binding_3 PF01494.19 gi|15920270|ref|NP_375939.1| - 0.11 11.7 0.1 0.19 11.0 0.1 1.3 1 0 0 1 1 1 0 FAD binding domain NAD_binding_8 PF13450.6 gi|15920270|ref|NP_375939.1| - 0.12 12.7 0.0 1 9.6 0.0 2.3 2 0 0 2 2 2 0 NAD(P)-binding Rossmann-like domain 2-Hacid_dh_C PF02826.19 gi|15920270|ref|NP_375939.1| - 0.14 11.5 0.0 0.25 10.7 0.0 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain STT3_PglB_C PF18527.1 gi|15920270|ref|NP_375939.1| - 1.9 8.6 6.0 3.3 7.9 0.0 3.7 4 1 0 4 4 4 0 STT3/PglB C-terminal beta-barrel domain Ald_Xan_dh_C2 PF02738.18 gi|15920271|ref|NP_375940.1| - 9.8e-134 446.8 0.0 1.1e-133 446.6 0.0 1.0 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 gi|15920271|ref|NP_375940.1| - 2.1e-15 57.0 0.0 4.3e-15 56.0 0.0 1.6 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain WW_1 PF18507.1 gi|15920271|ref|NP_375940.1| - 0.043 13.5 0.4 0.12 12.1 0.4 1.8 1 0 0 1 1 1 0 WW domain DUF2931 PF11153.8 gi|15920271|ref|NP_375940.1| - 0.13 12.0 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2931) FAD_binding_5 PF00941.21 gi|15920272|ref|NP_375941.1| - 1.1e-45 155.4 0.0 1.8e-45 154.8 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain in molybdopterin dehydrogenase Fer2_2 PF01799.20 gi|15920272|ref|NP_375941.1| - 3.1e-19 68.8 0.0 7.1e-19 67.6 0.0 1.6 1 0 0 1 1 1 1 [2Fe-2S] binding domain Fer2 PF00111.27 gi|15920272|ref|NP_375941.1| - 4e-08 33.1 0.3 9.8e-08 31.9 0.3 1.7 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 gi|15920272|ref|NP_375941.1| - 1.2e-07 31.7 0.1 6.9e-07 29.2 0.1 2.3 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain TAL_FSA PF00923.19 gi|15920272|ref|NP_375941.1| - 0.019 14.3 0.0 0.031 13.6 0.0 1.3 1 0 0 1 1 1 0 Transaldolase/Fructose-6-phosphate aldolase ECH_1 PF00378.20 gi|15920273|ref|NP_375942.1| - 6.1e-45 153.5 0.0 6.9e-45 153.3 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|15920273|ref|NP_375942.1| - 1.5e-31 110.1 0.0 1.8e-31 109.9 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase Thiolase_N PF00108.23 gi|15920275|ref|NP_375944.1| - 6.8e-22 78.1 0.0 1.6e-21 76.8 0.0 1.7 1 1 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|15920275|ref|NP_375944.1| - 1.2e-05 24.9 0.1 2.7e-05 23.8 0.1 1.6 1 0 0 1 1 1 1 Thiolase, C-terminal domain ACP_syn_III PF08545.10 gi|15920275|ref|NP_375944.1| - 6.5e-05 22.7 0.1 0.0084 16.0 0.0 2.4 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FAE1_CUT1_RppA PF08392.12 gi|15920275|ref|NP_375944.1| - 0.0093 15.3 0.1 0.018 14.3 0.1 1.4 1 0 0 1 1 1 1 FAE1/Type III polyketide synthase-like protein ketoacyl-synt PF00109.26 gi|15920275|ref|NP_375944.1| - 0.088 12.4 0.0 0.31 10.6 0.0 1.9 2 0 0 2 2 2 0 Beta-ketoacyl synthase, N-terminal domain DUF3211 PF11485.8 gi|15920276|ref|NP_375945.1| - 1.4e-42 145.2 7.0 1.5e-42 145.0 7.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3211) EF-hand_1 PF00036.32 gi|15920276|ref|NP_375945.1| - 0.019 14.5 0.6 0.048 13.2 0.0 2.0 2 0 0 2 2 2 0 EF hand ELFV_dehydrog_N PF02812.18 gi|15920277|ref|NP_375946.1| - 1.6e-06 28.0 0.0 2.1e-06 27.6 0.0 1.2 1 0 0 1 1 1 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DDE_Tnp_IS1 PF03400.13 gi|15920278|ref|NP_375947.1| - 7e-12 45.8 0.7 7e-12 45.8 0.7 1.8 2 0 0 2 2 2 1 IS1 transposase DDE_Tnp_IS66 PF03050.14 gi|15920278|ref|NP_375947.1| - 3.8e-05 23.3 1.0 8.1e-05 22.2 1.0 1.6 1 1 0 1 1 1 1 Transposase IS66 family Zn_Tnp_IS1 PF03811.13 gi|15920278|ref|NP_375947.1| - 0.00043 20.0 2.1 0.00088 19.0 2.1 1.5 1 0 0 1 1 1 1 InsA N-terminal domain zf-Mss51 PF13824.6 gi|15920278|ref|NP_375947.1| - 0.0034 17.4 1.3 0.0075 16.3 1.3 1.6 1 0 0 1 1 1 1 Zinc-finger of mitochondrial splicing suppressor 51 DUF2225 PF09986.9 gi|15920278|ref|NP_375947.1| - 0.0084 15.9 0.8 0.0084 15.9 0.8 1.9 1 1 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2225) Zn-ribbon_8 PF09723.10 gi|15920278|ref|NP_375947.1| - 0.012 15.8 5.2 0.78 9.9 0.7 2.3 2 0 0 2 2 2 0 Zinc ribbon domain Lar_restr_allev PF14354.6 gi|15920278|ref|NP_375947.1| - 0.032 14.6 1.3 0.067 13.6 1.3 1.5 1 0 0 1 1 1 0 Restriction alleviation protein Lar HTH_Tnp_IS630 PF01710.16 gi|15920278|ref|NP_375947.1| - 0.056 13.5 0.9 0.37 10.9 0.0 2.6 1 1 2 3 3 3 0 Transposase HTH_23 PF13384.6 gi|15920278|ref|NP_375947.1| - 0.061 13.1 0.7 4.6 7.1 0.0 2.8 3 0 0 3 3 3 0 Homeodomain-like domain Zn_Tnp_IS1595 PF12760.7 gi|15920278|ref|NP_375947.1| - 0.063 13.3 4.7 0.12 12.3 4.7 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain HTH_17 PF12728.7 gi|15920278|ref|NP_375947.1| - 0.089 13.0 0.1 11 6.3 0.0 2.6 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_38 PF13936.6 gi|15920278|ref|NP_375947.1| - 0.098 12.4 0.1 0.26 11.1 0.1 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain DUF1289 PF06945.13 gi|15920278|ref|NP_375947.1| - 0.1 12.4 0.4 0.21 11.4 0.4 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1289) TF_Zn_Ribbon PF08271.12 gi|15920278|ref|NP_375947.1| - 0.15 11.6 1.6 2.2 7.8 1.6 2.2 1 1 1 2 2 2 0 TFIIB zinc-binding zf-C2H2 PF00096.26 gi|15920278|ref|NP_375947.1| - 0.35 11.4 2.0 1.4 9.5 2.0 2.1 1 0 0 1 1 1 0 Zinc finger, C2H2 type zf-H2C2_2 PF13465.6 gi|15920278|ref|NP_375947.1| - 4.6 7.9 7.2 0.84 10.2 1.0 2.5 2 0 0 2 2 2 0 Zinc-finger double domain ELFV_dehydrog PF00208.21 gi|15920279|ref|NP_375948.1| - 1.5e-12 47.8 0.0 1.7e-12 47.6 0.0 1.0 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DUF1404 PF07185.11 gi|15920281|ref|NP_375950.1| - 4.3e-47 160.0 28.2 5e-47 159.8 28.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1404) COX1 PF00115.20 gi|15920282|ref|NP_375951.1| - 1.5e-119 399.7 60.8 1.5e-119 399.7 60.8 2.3 2 0 0 2 2 2 1 Cytochrome C and Quinol oxidase polypeptide I COX3 PF00510.18 gi|15920282|ref|NP_375951.1| - 9.5e-15 55.1 16.3 9.5e-15 55.1 16.3 3.0 3 1 0 3 3 3 1 Cytochrome c oxidase subunit III SoxE PF06525.11 gi|15920283|ref|NP_375952.1| - 4.8e-68 227.3 4.2 7.6e-68 226.7 4.2 1.3 1 0 0 1 1 1 1 Sulfocyanin (SoxE) domain COX2 PF00116.20 gi|15920284|ref|NP_375953.1| - 1.9e-12 47.1 0.9 2e-11 43.8 0.1 2.0 1 1 1 2 2 2 2 Cytochrome C oxidase subunit II, periplasmic domain Cupredoxin_1 PF13473.6 gi|15920284|ref|NP_375953.1| - 0.013 15.6 0.0 0.017 15.3 0.0 1.2 1 0 0 1 1 1 0 Cupredoxin-like domain Cytochrom_B_C PF00032.17 gi|15920285|ref|NP_375954.1| - 0.029 14.7 0.8 0.029 14.7 0.8 2.4 1 1 2 3 3 3 0 Cytochrome b(C-terminal)/b6/petD ArAE_2_N PF10337.9 gi|15920285|ref|NP_375954.1| - 0.18 10.8 4.5 0.23 10.5 4.5 1.2 1 0 0 1 1 1 0 Putative ER transporter, 6TM, N-terminal DUF3147 PF11345.8 gi|15920285|ref|NP_375954.1| - 0.31 11.4 6.9 0.079 13.3 1.4 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF3147) DUF805 PF05656.14 gi|15920285|ref|NP_375954.1| - 2.4 8.6 8.1 6.3 7.3 8.1 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF805) Rieske PF00355.26 gi|15920287|ref|NP_375956.1| - 1.8e-11 43.8 0.0 3.4e-11 42.9 0.0 1.4 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain UCR_Fe-S_N PF10399.9 gi|15920287|ref|NP_375956.1| - 0.081 12.3 0.1 0.13 11.6 0.1 1.4 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal TAT_signal PF10518.9 gi|15920287|ref|NP_375956.1| - 0.097 12.6 0.1 0.2 11.6 0.1 1.6 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Cytochrom_B_N_2 PF13631.6 gi|15920288|ref|NP_375957.1| - 1.1e-30 106.9 5.7 1.1e-30 106.9 5.7 2.4 4 0 0 4 4 4 1 Cytochrome b(N-terminal)/b6/petB Cytochrome_B PF00033.19 gi|15920288|ref|NP_375957.1| - 1.7e-25 90.0 13.6 1.7e-25 90.0 13.6 2.6 2 0 0 2 2 2 1 Cytochrome b/b6/petB Cytochrom_B_C PF00032.17 gi|15920288|ref|NP_375957.1| - 0.00072 19.8 2.8 0.00072 19.8 2.8 3.5 4 1 0 4 4 4 1 Cytochrome b(C-terminal)/b6/petD DUF4405 PF14358.6 gi|15920288|ref|NP_375957.1| - 0.0028 18.1 5.5 0.0028 18.1 5.5 4.5 4 0 0 4 4 4 1 Domain of unknown function (DUF4405) DUF4079 PF13301.6 gi|15920288|ref|NP_375957.1| - 0.004 17.3 1.0 0.004 17.3 1.0 2.8 3 1 0 3 3 3 1 Protein of unknown function (DUF4079) Ni_hydr_CYTB PF01292.20 gi|15920288|ref|NP_375957.1| - 0.0042 16.7 16.3 0.13 11.8 4.9 3.1 2 2 0 2 2 2 2 Prokaryotic cytochrome b561 Ferric_reduct PF01794.19 gi|15920288|ref|NP_375957.1| - 0.037 14.2 15.8 0.34 11.0 0.1 3.6 2 1 1 4 4 4 0 Ferric reductase like transmembrane component DUF1088 PF06469.11 gi|15920288|ref|NP_375957.1| - 0.23 11.1 0.1 0.33 10.6 0.1 1.1 1 0 0 1 1 1 0 Domain of Unknown Function (DUF1088) DrsE PF02635.15 gi|15920290|ref|NP_375959.1| - 0.019 15.3 0.0 0.027 14.8 0.0 1.3 1 1 0 1 1 1 0 DsrE/DsrF-like family HTH_24 PF13412.6 gi|15920291|ref|NP_375960.1| - 2.2e-20 72.0 1.9 1.3e-10 40.7 0.1 2.5 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|15920291|ref|NP_375960.1| - 2.4e-12 46.5 0.0 5.4e-05 22.9 0.0 2.2 2 0 0 2 2 2 2 AsnC-type helix-turn-helix domain HTH_11 PF08279.12 gi|15920291|ref|NP_375960.1| - 1.4e-05 25.0 0.9 0.072 13.0 0.0 3.3 3 1 1 4 4 4 2 HTH domain HTH_5 PF01022.20 gi|15920291|ref|NP_375960.1| - 1.8e-05 24.5 1.7 0.0013 18.6 0.0 2.4 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_Mga PF08280.11 gi|15920291|ref|NP_375960.1| - 2.1e-05 24.4 6.7 0.035 14.1 0.2 2.9 3 0 0 3 3 3 2 M protein trans-acting positive regulator (MGA) HTH domain HTH_23 PF13384.6 gi|15920291|ref|NP_375960.1| - 0.00086 19.0 0.0 0.094 12.5 0.0 2.4 2 0 0 2 2 2 1 Homeodomain-like domain HTH_Crp_2 PF13545.6 gi|15920291|ref|NP_375960.1| - 0.001 19.0 0.0 1.6 8.8 0.0 2.4 2 0 0 2 2 2 2 Crp-like helix-turn-helix domain MarR PF01047.22 gi|15920291|ref|NP_375960.1| - 0.0012 18.7 0.1 1 9.4 0.0 2.6 2 0 0 2 2 2 2 MarR family Sigma70_r4_2 PF08281.12 gi|15920291|ref|NP_375960.1| - 0.0029 17.2 0.0 0.026 14.2 0.0 2.2 2 0 0 2 2 2 1 Sigma-70, region 4 HTH_10 PF04967.12 gi|15920291|ref|NP_375960.1| - 0.0052 16.6 0.4 0.45 10.4 0.1 2.5 2 0 0 2 2 2 1 HTH DNA binding domain TrmB PF01978.19 gi|15920291|ref|NP_375960.1| - 0.0052 16.6 0.2 0.044 13.7 0.0 2.5 2 1 1 3 3 3 1 Sugar-specific transcriptional regulator TrmB TnsD PF15978.5 gi|15920291|ref|NP_375960.1| - 0.013 14.5 0.1 0.13 11.2 0.1 2.0 2 0 0 2 2 2 0 Tn7-like transposition protein D NUMOD1 PF07453.13 gi|15920291|ref|NP_375960.1| - 0.02 15.2 1.6 7.1 7.0 0.1 2.9 2 0 0 2 2 2 0 NUMOD1 domain IF2_N PF04760.15 gi|15920291|ref|NP_375960.1| - 0.083 12.7 0.2 3.2 7.6 0.1 2.5 2 0 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region PARP_reg PF02877.14 gi|15920291|ref|NP_375960.1| - 0.11 12.6 1.4 5.4 7.1 0.1 2.8 1 1 2 3 3 3 0 Poly(ADP-ribose) polymerase, regulatory domain MarR_2 PF12802.7 gi|15920291|ref|NP_375960.1| - 0.16 11.9 0.0 1.4 8.9 0.0 2.0 2 0 0 2 2 2 0 MarR family HTH_20 PF12840.7 gi|15920291|ref|NP_375960.1| - 0.16 12.0 0.0 9 6.4 0.1 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain GerE PF00196.19 gi|15920291|ref|NP_375960.1| - 0.18 11.3 0.1 0.18 11.3 0.1 3.2 4 0 0 4 4 4 0 Bacterial regulatory proteins, luxR family Acetyltransf_1 PF00583.25 gi|15920292|ref|NP_375961.1| - 7.3e-18 64.9 0.1 8.9e-18 64.6 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|15920292|ref|NP_375961.1| - 1.8e-13 50.5 0.0 2.5e-13 50.1 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|15920292|ref|NP_375961.1| - 2.5e-12 47.0 0.2 3.6e-12 46.5 0.2 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|15920292|ref|NP_375961.1| - 4e-08 33.1 0.0 7.2e-08 32.3 0.0 1.4 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_4 PF13420.7 gi|15920292|ref|NP_375961.1| - 1.2e-07 32.0 0.2 1.5e-07 31.7 0.2 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|15920292|ref|NP_375961.1| - 2.3e-07 30.9 0.0 3.1e-07 30.5 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|15920292|ref|NP_375961.1| - 0.0011 19.6 0.0 0.0013 19.5 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain KH_9 PF17904.1 gi|15920292|ref|NP_375961.1| - 0.0019 18.5 0.0 0.05 14.0 0.0 2.3 2 0 0 2 2 2 1 FMRP KH0 domain Acetyltransf_CG PF14542.6 gi|15920292|ref|NP_375961.1| - 0.0027 17.8 0.0 0.011 15.9 0.0 2.0 1 1 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_13 PF13880.6 gi|15920292|ref|NP_375961.1| - 0.0037 17.2 0.0 0.0078 16.2 0.0 1.6 1 1 0 1 1 1 1 ESCO1/2 acetyl-transferase Acetyltransf_15 PF17013.5 gi|15920292|ref|NP_375961.1| - 0.012 15.1 1.3 0.045 13.2 1.3 1.9 1 1 0 1 1 1 0 Putative acetyl-transferase Acetyltransf_6 PF13480.7 gi|15920292|ref|NP_375961.1| - 0.11 12.7 0.0 0.15 12.2 0.0 1.3 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Malic_M PF03949.15 gi|15920293|ref|NP_375962.1| - 1.8e-28 99.5 1.2 9.7e-28 97.1 1.2 2.0 1 1 0 1 1 1 1 Malic enzyme, NAD binding domain malic PF00390.19 gi|15920293|ref|NP_375962.1| - 9.8e-26 90.7 0.1 9.1e-23 81.0 0.1 2.6 1 1 0 1 1 1 1 Malic enzyme, N-terminal domain Shikimate_DH PF01488.20 gi|15920293|ref|NP_375962.1| - 0.17 12.0 0.8 12 5.9 0.1 2.4 2 0 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase DUF929 PF06053.11 gi|15920294|ref|NP_375963.1| - 1.1e-86 290.2 18.3 1.3e-86 290.0 18.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF929) Ac76 PF05814.11 gi|15920294|ref|NP_375963.1| - 0.0048 16.9 1.6 0.0096 15.9 1.6 1.4 1 0 0 1 1 1 1 Orf76 (Ac76) PsbY PF06298.11 gi|15920294|ref|NP_375963.1| - 0.0082 16.0 0.4 0.0082 16.0 0.4 2.3 2 0 0 2 2 2 1 Photosystem II protein Y (PsbY) FtsX PF02687.21 gi|15920294|ref|NP_375963.1| - 0.021 15.3 2.6 7.6 7.1 1.1 2.7 2 1 0 2 2 2 0 FtsX-like permease family DUF3149 PF11346.8 gi|15920294|ref|NP_375963.1| - 0.023 14.3 3.9 0.044 13.4 3.9 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3149) CshA_NR2 PF18651.1 gi|15920294|ref|NP_375963.1| - 0.053 12.7 0.0 0.078 12.2 0.0 1.2 1 0 0 1 1 1 0 Surface adhesin CshA non-repetitive domain 2 FeoB_associated PF12669.7 gi|15920294|ref|NP_375963.1| - 6.6 7.2 6.0 61 4.1 5.3 2.4 2 0 0 2 2 2 0 FeoB-associated Cys-rich membrane protein CoA_binding_2 PF13380.6 gi|15920295|ref|NP_375964.1| - 4.6e-38 130.3 0.0 5.4e-38 130.1 0.0 1.1 1 0 0 1 1 1 1 CoA binding domain CoA_binding PF02629.19 gi|15920295|ref|NP_375964.1| - 7.5e-05 23.3 0.0 0.00011 22.8 0.0 1.3 1 0 0 1 1 1 1 CoA binding domain DUF4849 PF16141.5 gi|15920295|ref|NP_375964.1| - 0.085 12.1 0.1 0.11 11.8 0.1 1.2 1 0 0 1 1 1 0 Putative glycoside hydrolase Family 18, chitinase_18 ATP-synt_ab_Xtn PF16886.5 gi|15920296|ref|NP_375965.1| - 0.049 13.5 0.3 0.16 11.9 0.3 1.8 2 0 0 2 2 2 0 ATPsynthase alpha/beta subunit N-term extension DUF4044 PF13253.6 gi|15920296|ref|NP_375965.1| - 0.23 11.0 2.5 0.66 9.5 2.5 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF4044) Fimbrillin_C PF15495.6 gi|15920296|ref|NP_375965.1| - 0.27 11.7 2.4 0.23 11.9 0.5 1.9 2 0 0 2 2 2 0 Major fimbrial subunit protein type IV, Fimbrillin, C-terminal XdhC_C PF13478.6 gi|15920299|ref|NP_375968.1| - 1.5e-20 73.9 0.1 2.2e-20 73.4 0.1 1.2 1 0 0 1 1 1 1 XdhC Rossmann domain PglD_N PF17836.1 gi|15920299|ref|NP_375968.1| - 0.0022 18.6 1.5 0.0071 17.0 0.6 2.2 2 0 0 2 2 2 1 PglD N-terminal domain 2-Hacid_dh_C PF02826.19 gi|15920299|ref|NP_375968.1| - 0.025 13.9 0.1 0.037 13.4 0.1 1.3 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FumaraseC_C PF10415.9 gi|15920299|ref|NP_375968.1| - 0.068 13.6 2.9 0.069 13.6 0.5 2.3 2 0 0 2 2 2 0 Fumarase C C-terminus AF0941-like PF14591.6 gi|15920300|ref|NP_375969.1| - 0.0067 17.0 6.3 0.14 12.7 0.1 4.1 3 0 0 3 3 3 1 AF0941-like AAA_18 PF13238.6 gi|15920300|ref|NP_375969.1| - 0.022 15.3 0.0 0.11 13.0 0.0 2.3 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 gi|15920300|ref|NP_375969.1| - 0.03 14.8 0.1 0.18 12.3 0.0 2.3 2 0 0 2 2 2 0 ABC transporter Ninjurin PF04923.12 gi|15920301|ref|NP_375970.1| - 1.5 8.8 10.2 4.7 7.2 4.9 2.7 1 1 1 2 2 2 0 Ninjurin TrmO PF01980.16 gi|15920302|ref|NP_375971.1| - 1.2e-25 90.0 0.0 1.9e-25 89.4 0.0 1.3 1 0 0 1 1 1 1 tRNA-methyltransferase O Radical_SAM PF04055.21 gi|15920303|ref|NP_375972.1| - 7.5e-25 88.2 0.0 2.4e-23 83.3 0.0 2.2 1 1 1 2 2 2 1 Radical SAM superfamily SPASM PF13186.6 gi|15920303|ref|NP_375972.1| - 3.9e-09 36.9 0.3 1.1e-08 35.5 0.3 1.7 1 0 0 1 1 1 1 Iron-sulfur cluster-binding domain Fer4_12 PF13353.6 gi|15920303|ref|NP_375972.1| - 9.1e-09 35.7 0.0 3.4e-08 33.8 0.0 1.8 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|15920303|ref|NP_375972.1| - 1.7e-07 31.4 0.0 4.1e-07 30.1 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain AP_endonuc_2 PF01261.24 gi|15920303|ref|NP_375972.1| - 4.4e-05 23.0 0.0 0.0012 18.4 0.0 2.3 2 0 0 2 2 2 1 Xylose isomerase-like TIM barrel Radical_SAM PF04055.21 gi|15920304|ref|NP_375973.1| - 2.6e-15 57.2 0.0 1.2e-14 55.0 0.0 2.0 1 1 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|15920304|ref|NP_375973.1| - 3.2e-06 27.5 0.0 6.2e-06 26.5 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain SPASM PF13186.6 gi|15920304|ref|NP_375973.1| - 1.8e-05 25.1 0.0 0.00011 22.7 0.0 2.2 2 0 0 2 2 2 1 Iron-sulfur cluster-binding domain Fer4_14 PF13394.6 gi|15920304|ref|NP_375973.1| - 0.00013 22.1 0.0 0.00027 21.1 0.0 1.5 1 0 0 1 1 1 1 4Fe-4S single cluster domain TP_methylase PF00590.20 gi|15920304|ref|NP_375973.1| - 0.04 13.8 0.0 0.099 12.6 0.0 1.6 1 0 0 1 1 1 0 Tetrapyrrole (Corrin/Porphyrin) Methylases Aldo_ket_red PF00248.21 gi|15920307|ref|NP_375976.1| - 9.7e-63 212.1 0.7 8.9e-61 205.6 0.7 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family Bac_export_2 PF01312.19 gi|15920308|ref|NP_375977.1| - 0.93 8.6 3.8 4.3 6.4 0.2 2.0 2 0 0 2 2 2 0 FlhB HrpN YscU SpaS Family 7TMR-DISM_7TM PF07695.11 gi|15920309|ref|NP_375978.1| - 0.0023 17.8 13.7 0.0038 17.1 13.6 1.3 1 1 0 1 1 1 1 7TM diverse intracellular signalling DUF1129 PF06570.11 gi|15920309|ref|NP_375978.1| - 0.072 12.6 4.4 0.089 12.3 3.9 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF1129) DUF2919 PF11143.8 gi|15920309|ref|NP_375978.1| - 0.16 12.3 6.0 0.079 13.3 3.7 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF2919) DUF983 PF06170.12 gi|15920309|ref|NP_375978.1| - 0.94 9.9 7.4 2.4 8.6 0.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF983) CAAD PF14159.6 gi|15920310|ref|NP_375979.1| - 5.8 6.8 12.7 0.78 9.6 0.3 3.1 2 1 1 3 3 3 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase DUF2070 PF09843.9 gi|15920310|ref|NP_375979.1| - 9.1 4.4 13.6 9.2 4.4 13.6 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) ABC2_membrane_3 PF12698.7 gi|15920311|ref|NP_375980.1| - 0.25 10.4 10.0 0.25 10.4 10.0 1.0 1 0 0 1 1 1 0 ABC-2 family transporter protein Phage_holin_3_6 PF07332.11 gi|15920311|ref|NP_375980.1| - 0.82 9.7 6.5 0.88 9.6 6.5 1.0 1 0 0 1 1 1 0 Putative Actinobacterial Holin-X, holin superfamily III Rieske PF00355.26 gi|15920312|ref|NP_375981.1| - 3.1e-07 30.2 0.2 1.3e-06 28.3 0.2 1.9 1 1 0 1 1 1 1 Rieske [2Fe-2S] domain UCR_Fe-S_N PF10399.9 gi|15920312|ref|NP_375981.1| - 0.12 11.7 0.2 0.32 10.4 0.2 1.7 1 0 0 1 1 1 0 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal T_cell_tran_alt PF15128.6 gi|15920313|ref|NP_375982.1| - 0.036 13.9 0.2 0.079 12.8 0.1 1.6 2 0 0 2 2 2 0 T-cell leukemia translocation-altered COX1 PF00115.20 gi|15920314|ref|NP_375983.1| - 5.6e-74 249.5 53.6 7e-74 249.2 53.6 1.0 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I SHR3_chaperone PF08229.11 gi|15920314|ref|NP_375983.1| - 0.2 10.6 1.5 0.49 9.3 1.5 1.6 1 0 0 1 1 1 0 ER membrane protein SH3 G0-G1_switch_2 PF15103.6 gi|15920314|ref|NP_375983.1| - 0.72 10.3 1.9 1.2 9.6 0.0 2.2 3 0 0 3 3 3 0 G0/G1 switch protein 2 Cytochrom_B_N_2 PF13631.6 gi|15920315|ref|NP_375984.1| - 1.4e-55 187.8 5.2 1.4e-55 187.8 5.2 3.6 4 0 0 4 4 4 2 Cytochrome b(N-terminal)/b6/petB Cytochrome_B PF00033.19 gi|15920315|ref|NP_375984.1| - 4.2e-22 78.9 11.0 4.2e-22 78.9 11.0 3.1 3 0 0 3 3 3 1 Cytochrome b/b6/petB Tetraspanin PF00335.20 gi|15920315|ref|NP_375984.1| - 0.44 10.2 0.0 0.44 10.2 0.0 4.0 3 2 2 5 5 5 0 Tetraspanin family DUF2157 PF09925.9 gi|15920315|ref|NP_375984.1| - 2.3 8.0 9.3 0.22 11.3 0.9 3.6 2 2 0 2 2 2 0 Predicted membrane protein (DUF2157) DUF1404 PF07185.11 gi|15920316|ref|NP_375985.1| - 2.9e-59 199.6 19.0 3.3e-59 199.4 19.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1404) HPP PF04982.13 gi|15920317|ref|NP_375986.1| - 6.8e-09 35.9 0.6 6.8e-09 35.9 0.6 1.5 1 1 0 1 1 1 1 HPP family DUF973 PF06157.11 gi|15920319|ref|NP_375988.1| - 2e-16 59.9 5.1 2e-16 59.9 5.1 2.0 1 1 1 2 2 2 1 Protein of unknown function (DUF973) SurA_N_3 PF13624.6 gi|15920319|ref|NP_375988.1| - 0.79 9.5 3.2 0.61 9.9 1.0 1.8 2 0 0 2 2 2 0 SurA N-terminal domain HTH_23 PF13384.6 gi|15920320|ref|NP_375989.1| - 5e-08 32.5 0.1 1.1e-07 31.5 0.1 1.6 1 0 0 1 1 1 1 Homeodomain-like domain Terminase_5 PF06056.12 gi|15920320|ref|NP_375989.1| - 1.4e-05 24.9 0.1 3e-05 23.8 0.1 1.6 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) Zn_Tnp_IS1 PF03811.13 gi|15920320|ref|NP_375989.1| - 2.3e-05 24.0 8.6 5.7e-05 22.7 8.6 1.7 1 0 0 1 1 1 1 InsA N-terminal domain HTH_28 PF13518.6 gi|15920320|ref|NP_375989.1| - 5.1e-05 23.3 0.0 0.00012 22.1 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_38 PF13936.6 gi|15920320|ref|NP_375989.1| - 0.00027 20.6 0.0 0.00062 19.5 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|15920320|ref|NP_375989.1| - 0.00047 19.8 0.0 0.00088 18.9 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 zf-ribbon_3 PF13248.6 gi|15920320|ref|NP_375989.1| - 0.0017 17.7 2.1 0.91 9.0 0.1 2.3 2 0 0 2 2 2 2 zinc-ribbon domain HTH_Tnp_ISL3 PF13542.6 gi|15920320|ref|NP_375989.1| - 0.0023 17.3 0.0 0.0051 16.2 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_Tnp_1 PF01527.20 gi|15920320|ref|NP_375989.1| - 0.0024 18.1 0.1 0.0057 16.9 0.1 1.6 1 0 0 1 1 1 1 Transposase HTH_Tnp_IS630 PF01710.16 gi|15920320|ref|NP_375989.1| - 0.01 15.9 0.1 0.022 14.8 0.1 1.6 1 0 0 1 1 1 0 Transposase SAC3_GANP PF03399.16 gi|15920320|ref|NP_375989.1| - 0.015 14.7 0.0 2.6 7.3 0.0 2.2 2 0 0 2 2 2 0 SAC3/GANP family HTH_29 PF13551.6 gi|15920320|ref|NP_375989.1| - 0.017 15.1 0.0 0.032 14.3 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix OrfB_Zn_ribbon PF07282.11 gi|15920320|ref|NP_375989.1| - 0.031 14.2 1.4 0.086 12.8 1.4 1.7 1 0 0 1 1 1 0 Putative transposase DNA-binding domain DUF1804 PF08822.11 gi|15920320|ref|NP_375989.1| - 0.045 13.7 0.2 0.21 11.6 0.2 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1804) Zn_Tnp_IS1595 PF12760.7 gi|15920320|ref|NP_375989.1| - 0.048 13.6 5.0 0.093 12.7 5.0 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain HTH_40 PF14493.6 gi|15920320|ref|NP_375989.1| - 0.054 14.0 0.0 0.11 13.0 0.0 1.5 2 0 0 2 2 1 0 Helix-turn-helix domain HTH_Tnp_IS1 PF12759.7 gi|15920320|ref|NP_375989.1| - 0.082 12.5 0.0 0.15 11.7 0.0 1.4 1 0 0 1 1 1 0 InsA C-terminal domain GerE PF00196.19 gi|15920320|ref|NP_375989.1| - 0.11 12.1 0.0 0.21 11.2 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family Zn-ribbon_8 PF09723.10 gi|15920320|ref|NP_375989.1| - 0.22 11.6 4.7 1.4 9.1 0.6 2.5 2 0 0 2 2 2 0 Zinc ribbon domain Nudix_N_2 PF14803.6 gi|15920320|ref|NP_375989.1| - 0.94 9.5 5.5 2.1 8.3 5.5 1.6 1 0 0 1 1 1 0 Nudix N-terminal Lar_restr_allev PF14354.6 gi|15920320|ref|NP_375989.1| - 1.1 9.7 5.0 0.37 11.2 1.0 2.1 2 0 0 2 2 2 0 Restriction alleviation protein Lar DDE_Tnp_IS240 PF13610.6 gi|15920321|ref|NP_375990.1| - 3.8e-06 27.2 0.7 5.8e-06 26.6 0.7 1.2 1 0 0 1 1 1 1 DDE domain DDE_Tnp_IS66 PF03050.14 gi|15920321|ref|NP_375990.1| - 0.0038 16.8 0.0 0.0074 15.8 0.0 1.4 1 1 0 1 1 1 1 Transposase IS66 family Helicase_C PF00271.31 gi|15920324|ref|NP_375993.1| - 2.6e-17 63.1 0.0 2.8e-16 59.8 0.0 2.5 2 0 0 2 2 2 1 Helicase conserved C-terminal domain DEAD PF00270.29 gi|15920324|ref|NP_375993.1| - 4e-14 52.8 0.0 2.4e-13 50.2 0.0 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase ResIII PF04851.15 gi|15920324|ref|NP_375993.1| - 7.8e-08 32.5 0.0 2e-07 31.2 0.0 1.7 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 gi|15920324|ref|NP_375993.1| - 8.9e-07 29.3 0.0 2.8e-06 27.6 0.0 1.8 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 gi|15920324|ref|NP_375993.1| - 0.0031 17.9 0.1 0.015 15.7 0.0 2.2 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) TniB PF05621.11 gi|15920324|ref|NP_375993.1| - 0.0055 16.1 0.0 0.013 14.9 0.0 1.7 1 0 0 1 1 1 1 Bacterial TniB protein AAA_24 PF13479.6 gi|15920324|ref|NP_375993.1| - 0.016 14.9 0.0 0.038 13.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.6 gi|15920324|ref|NP_375993.1| - 0.075 13.4 0.0 1.7 9.0 0.1 3.0 3 1 0 3 3 3 0 AAA domain DUF87 PF01935.17 gi|15920324|ref|NP_375993.1| - 0.081 13.0 0.0 0.29 11.2 0.0 1.9 1 0 0 1 1 1 0 Helicase HerA, central domain IstB_IS21 PF01695.17 gi|15920324|ref|NP_375993.1| - 0.081 12.7 0.0 0.66 9.7 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein AAA_18 PF13238.6 gi|15920324|ref|NP_375993.1| - 0.083 13.4 0.0 0.21 12.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain Mrr_N PF14338.6 gi|15920324|ref|NP_375993.1| - 0.14 12.3 0.0 0.51 10.5 0.0 2.0 1 0 0 1 1 1 0 Mrr N-terminal domain AAA_30 PF13604.6 gi|15920324|ref|NP_375993.1| - 0.14 11.8 0.0 0.28 10.9 0.0 1.4 1 0 0 1 1 1 0 AAA domain ATP-synt_ab PF00006.25 gi|15920324|ref|NP_375993.1| - 0.16 11.6 0.0 0.17 11.5 0.0 1.2 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain Zeta_toxin PF06414.12 gi|15920324|ref|NP_375993.1| - 0.18 11.0 0.0 0.39 10.0 0.0 1.5 1 0 0 1 1 1 0 Zeta toxin DrsE PF02635.15 gi|15920325|ref|NP_375994.1| - 6.1e-08 33.0 0.0 7e-08 32.8 0.0 1.2 1 0 0 1 1 1 1 DsrE/DsrF-like family SBP_bac_11 PF13531.6 gi|15920326|ref|NP_375995.1| - 7.4e-08 32.4 0.0 8.6e-08 32.2 0.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein AA_permease PF00324.21 gi|15920327|ref|NP_375996.1| - 1.1e-24 87.0 60.6 2e-24 86.0 60.6 1.5 1 1 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 gi|15920327|ref|NP_375996.1| - 1.8e-24 86.4 62.4 3.6e-24 85.4 62.1 1.6 1 1 0 1 1 1 1 Amino acid permease FmdA_AmdA PF03069.15 gi|15920328|ref|NP_375997.1| - 6.5e-73 245.7 0.0 5.3e-45 153.9 0.0 2.0 1 1 1 2 2 2 2 Acetamidase/Formamidase family OrfB_Zn_ribbon PF07282.11 gi|15920329|ref|NP_375998.1| - 6.2e-22 77.3 1.8 2.8e-21 75.2 0.4 2.3 2 0 0 2 2 2 1 Putative transposase DNA-binding domain OrfB_IS605 PF01385.19 gi|15920329|ref|NP_375998.1| - 0.0013 19.0 0.1 0.0026 18.0 0.1 1.5 1 0 0 1 1 1 1 Probable transposase OAF PF14941.6 gi|15920329|ref|NP_375998.1| - 0.01 15.3 0.1 0.016 14.6 0.1 1.2 1 0 0 1 1 1 1 Transcriptional regulator, Out at first zf-C4_Topoisom PF01396.19 gi|15920329|ref|NP_375998.1| - 0.071 12.9 0.2 0.16 11.8 0.2 1.6 1 0 0 1 1 1 0 Topoisomerase DNA binding C4 zinc finger AAA_15 PF13175.6 gi|15920330|ref|NP_375999.1| - 1.4e-27 97.4 32.5 3.9e-13 49.8 30.7 2.1 1 1 1 2 2 2 2 AAA ATPase domain AAA_21 PF13304.6 gi|15920330|ref|NP_375999.1| - 3.2e-21 76.4 11.3 1.2e-20 74.6 11.3 1.8 1 1 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system DUF2813 PF11398.8 gi|15920330|ref|NP_375999.1| - 2.1e-08 33.8 3.4 1.1e-06 28.1 4.3 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF2813) SMC_N PF02463.19 gi|15920330|ref|NP_375999.1| - 1.7e-06 27.6 11.3 6.8e-06 25.7 8.3 2.7 2 1 0 2 2 2 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|15920330|ref|NP_375999.1| - 5.6e-05 23.7 25.0 0.0017 18.9 25.1 3.2 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|15920330|ref|NP_375999.1| - 0.00039 20.1 0.0 0.00082 19.1 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF4595 PF15283.6 gi|15920330|ref|NP_375999.1| - 0.0017 18.4 4.9 0.0028 17.8 4.9 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4595) with porin-like fold MMR_HSR1 PF01926.23 gi|15920330|ref|NP_375999.1| - 0.0047 17.0 0.9 0.013 15.5 0.9 1.9 1 1 0 1 1 1 1 50S ribosome-binding GTPase ABC_tran PF00005.27 gi|15920330|ref|NP_375999.1| - 0.027 15.0 5.2 0.078 13.5 5.2 1.8 1 1 0 1 1 1 0 ABC transporter AAA_27 PF13514.6 gi|15920330|ref|NP_375999.1| - 0.044 13.4 0.0 0.11 12.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain E2_bind PF08825.10 gi|15920330|ref|NP_375999.1| - 0.057 13.6 0.0 0.15 12.3 0.0 1.7 1 0 0 1 1 1 0 E2 binding domain Dynamin_N PF00350.23 gi|15920330|ref|NP_375999.1| - 0.12 12.5 2.8 1.1 9.3 2.8 2.4 1 1 0 1 1 1 0 Dynamin family GluRS_N PF18466.1 gi|15920330|ref|NP_375999.1| - 1.2 9.5 8.2 1.1 9.7 2.9 2.9 3 0 0 3 3 2 0 Glutamate--tRNA ligase N-terminal domain PIN PF01850.21 gi|15920331|ref|NP_376000.1| - 2.7e-06 27.9 1.6 1.7e-05 25.3 1.6 2.0 1 1 0 1 1 1 1 PIN domain Amidohydro_2 PF04909.14 gi|15920332|ref|NP_376001.1| - 4e-42 145.0 0.0 4.5e-42 144.8 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase TatD_DNase PF01026.21 gi|15920332|ref|NP_376001.1| - 0.12 11.8 0.0 0.19 11.1 0.0 1.4 1 0 0 1 1 1 0 TatD related DNase DUF1178 PF06676.11 gi|15920332|ref|NP_376001.1| - 0.18 12.2 0.0 0.38 11.1 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1178) Gln-synt_C PF00120.24 gi|15920333|ref|NP_376002.1| - 3.8e-106 355.0 0.0 7.2e-106 354.1 0.0 1.4 1 1 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N_2 PF16952.5 gi|15920333|ref|NP_376002.1| - 2.1e-09 37.2 0.0 4.9e-09 36.0 0.0 1.7 1 0 0 1 1 1 1 Glutamine synthetase N-terminal domain UPF0228 PF05727.11 gi|15920333|ref|NP_376002.1| - 0.035 13.9 1.7 0.057 13.2 0.1 2.2 3 0 0 3 3 3 0 Uncharacterised protein family (UPF0228) DUF973 PF06157.11 gi|15920334|ref|NP_376003.1| - 2.4e-22 79.4 28.0 2.8e-22 79.2 28.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF973) SLATT_5 PF18160.1 gi|15920334|ref|NP_376003.1| - 0.048 13.0 4.8 0.05 12.9 3.4 1.8 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain family 5 PalH PF08733.10 gi|15920334|ref|NP_376003.1| - 0.21 10.5 6.3 0.26 10.3 6.3 1.3 1 0 0 1 1 1 0 PalH/RIM21 JAMP PF05571.12 gi|15920334|ref|NP_376003.1| - 0.49 10.0 5.9 0.61 9.7 5.9 1.3 1 0 0 1 1 1 0 JNK1/MAPK8-associated membrane protein DUF5423 PF17461.2 gi|15920334|ref|NP_376003.1| - 1.3 7.8 2.7 1.7 7.4 2.7 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5423) DUF2678 PF10856.8 gi|15920334|ref|NP_376003.1| - 4.7 7.2 10.5 0.66 9.9 4.7 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2678) PMP22_Claudin PF00822.20 gi|15920334|ref|NP_376003.1| - 9.3 6.1 13.7 54 3.6 8.1 2.8 1 1 2 3 3 3 0 PMP-22/EMP/MP20/Claudin family DUF772 PF05598.11 gi|15920336|ref|NP_376005.1| - 6.8e-05 22.8 0.1 0.00013 21.9 0.0 1.5 1 1 1 2 2 2 1 Transposase domain (DUF772) HTH_24 PF13412.6 gi|15920337|ref|NP_376006.1| - 6.6e-07 28.8 0.9 1.5e-06 27.7 0.4 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_34 PF13601.6 gi|15920337|ref|NP_376006.1| - 0.00017 21.7 0.2 0.00031 20.9 0.2 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain THUMP PF02926.17 gi|15920337|ref|NP_376006.1| - 0.0025 17.9 1.1 0.011 15.8 0.2 2.0 2 0 0 2 2 2 1 THUMP domain HTH_45 PF14947.6 gi|15920337|ref|NP_376006.1| - 0.0033 17.4 0.3 0.0099 15.8 0.3 1.8 2 0 0 2 2 2 1 Winged helix-turn-helix RinB PF06116.12 gi|15920337|ref|NP_376006.1| - 0.0034 17.4 0.3 0.011 15.8 0.3 1.9 1 0 0 1 1 1 1 Transcriptional activator RinB TrmB PF01978.19 gi|15920337|ref|NP_376006.1| - 0.0056 16.5 0.3 0.013 15.4 0.0 1.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB B-block_TFIIIC PF04182.12 gi|15920337|ref|NP_376006.1| - 0.013 15.7 0.1 0.024 14.8 0.1 1.5 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC MotA_activ PF09114.10 gi|15920337|ref|NP_376006.1| - 0.075 13.2 0.0 0.13 12.4 0.0 1.4 1 0 0 1 1 1 0 Transcription factor MotA, activation domain HTH_9 PF08221.11 gi|15920337|ref|NP_376006.1| - 0.1 12.7 0.0 0.28 11.3 0.0 1.7 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain MarR_2 PF12802.7 gi|15920337|ref|NP_376006.1| - 0.12 12.3 0.0 0.23 11.4 0.0 1.5 1 0 0 1 1 1 0 MarR family MarR PF01047.22 gi|15920337|ref|NP_376006.1| - 0.13 12.2 0.1 0.28 11.1 0.1 1.6 1 0 0 1 1 1 0 MarR family ParE_toxin PF05016.15 gi|15920339|ref|NP_376008.1| - 8.9e-06 26.2 0.0 1.1e-05 26.0 0.0 1.1 1 0 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE Phage_X PF05155.15 gi|15920341|ref|NP_376010.1| - 0.15 12.5 0.0 0.16 12.4 0.0 1.1 1 0 0 1 1 1 0 Phage X family Fer4 PF00037.27 gi|15920342|ref|NP_376011.1| - 4.2e-14 51.7 13.9 4.3e-07 29.5 6.0 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|15920342|ref|NP_376011.1| - 2.5e-09 37.6 15.1 1e-07 32.4 9.0 1.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15920342|ref|NP_376011.1| - 4e-09 36.5 6.0 5.7e-09 36.0 6.0 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15920342|ref|NP_376011.1| - 3.2e-08 33.6 7.0 6.2e-08 32.6 7.1 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15920342|ref|NP_376011.1| - 1.4e-07 31.5 6.3 2.2e-07 30.9 6.3 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15920342|ref|NP_376011.1| - 2.4e-07 30.6 13.7 0.00025 21.0 5.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_13 PF13370.6 gi|15920342|ref|NP_376011.1| - 9e-06 26.2 9.8 0.01 16.4 0.3 2.3 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_8 PF13183.6 gi|15920342|ref|NP_376011.1| - 4e-05 24.0 12.4 0.00022 21.6 7.2 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15920342|ref|NP_376011.1| - 4.4e-05 24.3 8.9 0.0085 17.0 3.1 2.2 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|15920342|ref|NP_376011.1| - 7.3e-05 23.0 8.1 0.045 14.3 3.4 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|15920342|ref|NP_376011.1| - 9.6e-05 22.3 10.9 0.03 14.4 4.3 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|15920342|ref|NP_376011.1| - 0.0001 22.7 0.9 0.33 11.5 0.5 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|15920342|ref|NP_376011.1| - 0.00018 22.2 13.8 0.012 16.5 6.8 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain ETF_QO PF05187.13 gi|15920342|ref|NP_376011.1| - 0.0016 18.5 1.0 0.0018 18.4 1.0 1.1 1 0 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_18 PF13746.6 gi|15920342|ref|NP_376011.1| - 0.0054 16.9 9.8 0.016 15.4 2.9 2.1 1 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|15920342|ref|NP_376011.1| - 0.034 14.9 10.7 0.75 10.6 0.1 2.8 2 1 0 2 2 2 0 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|15920342|ref|NP_376011.1| - 2.2 9.2 7.9 8 7.4 2.3 2.2 1 1 0 2 2 2 0 4Fe-4S dicluster domain HTH_10 PF04967.12 gi|15920343|ref|NP_376012.1| - 1e-20 73.2 0.2 2e-20 72.4 0.2 1.5 1 0 0 1 1 1 1 HTH DNA binding domain HTH_24 PF13412.6 gi|15920343|ref|NP_376012.1| - 9.7e-07 28.3 1.2 4.6e-05 22.9 0.6 2.6 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding Mga PF05043.13 gi|15920343|ref|NP_376012.1| - 0.0034 17.9 0.4 0.015 15.9 0.4 2.1 1 1 0 1 1 1 1 Mga helix-turn-helix domain HTH_Tnp_1_2 PF13022.6 gi|15920343|ref|NP_376012.1| - 0.0034 17.5 0.3 0.015 15.4 0.1 2.0 2 0 0 2 2 2 1 Helix-turn-helix of insertion element transposase MarR PF01047.22 gi|15920343|ref|NP_376012.1| - 0.0091 15.9 0.1 0.022 14.7 0.1 1.6 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|15920343|ref|NP_376012.1| - 0.011 15.6 0.0 0.021 14.7 0.0 1.5 1 0 0 1 1 1 0 MarR family HTH_3 PF01381.22 gi|15920343|ref|NP_376012.1| - 0.02 14.9 0.1 0.049 13.7 0.1 1.7 1 0 0 1 1 1 0 Helix-turn-helix HTH_11 PF08279.12 gi|15920343|ref|NP_376012.1| - 0.023 14.7 0.4 0.078 12.9 0.4 2.1 1 1 0 1 1 1 0 HTH domain DUF3289 PF11692.8 gi|15920343|ref|NP_376012.1| - 0.031 13.9 0.0 0.067 12.8 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3289) HTH_28 PF13518.6 gi|15920343|ref|NP_376012.1| - 0.039 14.1 0.1 0.071 13.3 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain RelE PF06296.12 gi|15920343|ref|NP_376012.1| - 0.044 13.9 1.6 2.9 8.0 0.0 2.5 3 0 0 3 3 3 0 RelE toxin of RelE / RelB toxin-antitoxin system Sigma70_r4 PF04545.16 gi|15920343|ref|NP_376012.1| - 0.053 13.0 0.2 0.19 11.3 0.1 2.0 1 1 1 2 2 2 0 Sigma-70, region 4 Fe_dep_repress PF01325.19 gi|15920343|ref|NP_376012.1| - 0.067 13.4 0.0 0.16 12.2 0.0 1.7 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_AraC PF00165.23 gi|15920343|ref|NP_376012.1| - 0.072 13.2 0.1 0.24 11.5 0.0 1.9 2 0 0 2 2 2 0 Bacterial regulatory helix-turn-helix proteins, AraC family IF2_N PF04760.15 gi|15920343|ref|NP_376012.1| - 0.08 12.8 0.5 0.36 10.7 0.2 2.4 2 1 0 2 2 1 0 Translation initiation factor IF-2, N-terminal region HTH_35 PF13693.6 gi|15920343|ref|NP_376012.1| - 0.082 13.0 0.0 0.18 11.9 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding GntR PF00392.21 gi|15920343|ref|NP_376012.1| - 0.094 12.4 0.1 0.18 11.4 0.1 1.5 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_23 PF13384.6 gi|15920343|ref|NP_376012.1| - 0.13 12.1 0.0 0.24 11.3 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain ENT PF03735.14 gi|15920343|ref|NP_376012.1| - 0.19 11.8 1.4 1.6 8.9 1.4 2.2 1 1 0 1 1 1 0 ENT domain Aminotran_1_2 PF00155.21 gi|15920344|ref|NP_376013.1| - 3.1e-13 49.7 0.0 5.3e-11 42.3 0.0 2.4 1 1 0 1 1 1 1 Aminotransferase class I and II Mei5 PF10376.9 gi|15920344|ref|NP_376013.1| - 0.0092 15.9 0.0 0.014 15.3 0.0 1.3 1 0 0 1 1 1 1 Double-strand recombination repair protein MukE PF04288.13 gi|15920344|ref|NP_376013.1| - 0.11 11.4 0.1 0.23 10.4 0.0 1.5 1 1 1 2 2 2 0 MukE-like family GtrA PF04138.14 gi|15920345|ref|NP_376014.1| - 3.2e-22 79.0 16.5 5.4e-22 78.2 16.5 1.3 1 1 0 1 1 1 1 GtrA-like protein p12I PF12233.8 gi|15920345|ref|NP_376014.1| - 2.8 8.5 10.0 0.96 10.0 5.1 2.0 1 1 1 2 2 2 0 Human adult T cell leukemia/lymphoma virus protein tRNA_SAD PF07973.14 gi|15920346|ref|NP_376015.1| - 4.7e-11 42.6 0.1 1.1e-10 41.4 0.1 1.7 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain tRNA-synt_2c PF01411.19 gi|15920346|ref|NP_376015.1| - 1.4e-10 40.4 0.1 1.8e-10 40.0 0.1 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (A) Snf7 PF03357.21 gi|15920347|ref|NP_376016.1| - 0.00023 20.8 0.4 0.00038 20.1 0.4 1.4 1 0 0 1 1 1 1 Snf7 LOH1CR12 PF10158.9 gi|15920347|ref|NP_376016.1| - 0.015 15.3 1.3 0.029 14.4 1.2 1.5 1 1 0 1 1 1 0 Tumour suppressor protein BLOC1S3 PF15753.5 gi|15920347|ref|NP_376016.1| - 0.069 13.3 0.2 0.11 12.6 0.2 1.4 1 0 0 1 1 1 0 Biogenesis of lysosome-related organelles complex 1 subunit 3 tRNA-synt_1b PF00579.25 gi|161751105|ref|NP_376017.2| - 2.2e-25 89.6 0.0 3.7e-25 88.8 0.0 1.4 1 0 0 1 1 1 1 tRNA synthetases class I (W and Y) HTH_38 PF13936.6 gi|15920349|ref|NP_376018.1| - 5.5e-21 74.0 8.5 2.7e-09 36.6 0.5 3.4 3 0 0 3 3 3 3 Helix-turn-helix domain HTH_23 PF13384.6 gi|15920349|ref|NP_376018.1| - 2.4e-19 68.6 0.5 1e-05 25.1 0.1 3.1 3 0 0 3 3 3 3 Homeodomain-like domain HTH_7 PF02796.15 gi|15920349|ref|NP_376018.1| - 2.2e-16 59.7 8.3 7.1e-05 22.8 0.7 3.2 3 0 0 3 3 3 3 Helix-turn-helix domain of resolvase Terminase_5 PF06056.12 gi|15920349|ref|NP_376018.1| - 3.7e-11 42.7 1.2 0.011 15.6 0.0 3.2 3 0 0 3 3 3 3 Putative ATPase subunit of terminase (gpP-like) HTH_29 PF13551.6 gi|15920349|ref|NP_376018.1| - 7.4e-11 41.9 0.1 0.0048 16.9 0.0 3.2 3 0 0 3 3 3 2 Winged helix-turn helix Sigma70_r4_2 PF08281.12 gi|15920349|ref|NP_376018.1| - 8.6e-11 41.3 2.2 0.0022 17.6 0.0 3.6 3 1 1 4 4 4 3 Sigma-70, region 4 HTH_28 PF13518.6 gi|15920349|ref|NP_376018.1| - 9e-11 41.7 0.1 0.0084 16.2 0.0 3.1 3 0 0 3 3 3 3 Helix-turn-helix domain HTH_40 PF14493.6 gi|15920349|ref|NP_376018.1| - 2.2e-10 40.9 2.2 0.017 15.6 0.1 3.2 1 1 2 3 3 3 3 Helix-turn-helix domain Recombinase PF07508.13 gi|15920349|ref|NP_376018.1| - 1.5e-08 35.0 5.0 0.045 14.1 0.2 3.5 3 1 0 3 3 3 3 Recombinase GerE PF00196.19 gi|15920349|ref|NP_376018.1| - 8.4e-08 31.6 4.2 0.077 12.6 0.2 3.3 2 1 1 3 3 3 3 Bacterial regulatory proteins, luxR family TnsD PF15978.5 gi|15920349|ref|NP_376018.1| - 1.4e-07 30.9 4.7 0.021 13.8 0.0 3.0 1 1 2 3 3 3 2 Tn7-like transposition protein D IF2_N PF04760.15 gi|15920349|ref|NP_376018.1| - 1.4e-07 31.2 9.3 0.0034 17.2 0.1 4.2 2 1 1 3 3 3 2 Translation initiation factor IF-2, N-terminal region Sigma70_r4 PF04545.16 gi|15920349|ref|NP_376018.1| - 2e-07 30.4 4.6 9.9e-05 21.8 0.1 3.5 3 1 0 3 3 3 1 Sigma-70, region 4 HTH_Tnp_1 PF01527.20 gi|15920349|ref|NP_376018.1| - 2.1e-07 31.1 0.4 0.33 11.3 0.0 3.2 3 0 0 3 3 3 2 Transposase HTH_24 PF13412.6 gi|15920349|ref|NP_376018.1| - 5.5e-07 29.1 1.0 0.18 11.4 0.0 3.8 4 0 0 4 4 3 2 Winged helix-turn-helix DNA-binding HTH_Tnp_Tc3_1 PF11427.8 gi|15920349|ref|NP_376018.1| - 6.6e-07 29.1 3.7 3.4e-06 26.8 0.3 2.7 2 1 0 3 3 2 1 Tc3 transposase HTH_32 PF13565.6 gi|15920349|ref|NP_376018.1| - 2e-06 28.3 0.0 0.044 14.4 0.0 3.0 3 0 0 3 3 3 1 Homeodomain-like domain HTH_11 PF08279.12 gi|15920349|ref|NP_376018.1| - 6.4e-06 26.0 2.9 0.21 11.5 0.1 3.3 3 0 0 3 3 3 2 HTH domain HTH_Tnp_ISL3 PF13542.6 gi|15920349|ref|NP_376018.1| - 7.9e-06 25.2 0.0 0.013 14.9 0.0 2.7 3 0 0 3 3 3 1 Helix-turn-helix domain of transposase family ISL3 Sigma70_ECF PF07638.11 gi|15920349|ref|NP_376018.1| - 1.2e-05 25.3 1.1 0.88 9.4 0.0 3.0 1 1 2 3 3 3 1 ECF sigma factor DUF3791 PF12668.7 gi|15920349|ref|NP_376018.1| - 1.4e-05 25.1 3.2 0.93 9.6 0.2 3.8 3 1 1 4 4 4 1 Protein of unknown function (DUF3791) MerR_1 PF13411.6 gi|15920349|ref|NP_376018.1| - 1.4e-05 25.1 4.0 0.094 12.8 0.1 3.6 3 1 1 4 4 4 1 MerR HTH family regulatory protein HTH_50 PF18024.1 gi|15920349|ref|NP_376018.1| - 1.9e-05 24.2 3.1 0.12 12.0 0.5 3.2 3 0 0 3 3 3 2 Helix-turn-helix domain Phage_antitermQ PF06530.12 gi|15920349|ref|NP_376018.1| - 3.9e-05 23.5 7.0 0.099 12.6 0.6 3.1 1 1 2 3 3 3 2 Phage antitermination protein Q ANT PF03374.14 gi|15920349|ref|NP_376018.1| - 4.5e-05 23.7 1.5 0.29 11.5 0.0 3.0 1 1 2 3 3 3 1 Phage antirepressor protein KilAC domain Sigma70_r3 PF04539.16 gi|15920349|ref|NP_376018.1| - 8.3e-05 22.6 1.2 0.043 13.9 0.0 3.6 3 2 1 4 4 4 1 Sigma-70 region 3 PAX PF00292.18 gi|15920349|ref|NP_376018.1| - 9.4e-05 22.3 0.3 0.027 14.4 0.1 2.9 1 1 1 2 2 2 1 'Paired box' domain GcrA PF07750.11 gi|15920349|ref|NP_376018.1| - 9.8e-05 22.8 0.5 1.3 9.4 0.0 2.9 1 1 2 3 3 3 1 GcrA cell cycle regulator DUF1699 PF08004.11 gi|15920349|ref|NP_376018.1| - 0.00012 21.7 8.3 1.1 8.9 0.7 3.1 1 1 2 3 3 3 3 Protein of unknown function (DUF1699) FumaraseC_C PF10415.9 gi|15920349|ref|NP_376018.1| - 0.00027 21.3 0.5 2.5 8.6 0.0 3.5 2 2 1 3 3 3 1 Fumarase C C-terminus DUF433 PF04255.14 gi|15920349|ref|NP_376018.1| - 0.00038 20.3 0.0 6.4 6.7 0.0 3.3 3 0 0 3 3 3 0 Protein of unknown function (DUF433) TrmB PF01978.19 gi|15920349|ref|NP_376018.1| - 0.00046 20.0 2.4 2 8.3 0.1 3.4 2 1 0 3 3 3 1 Sugar-specific transcriptional regulator TrmB CENP-B_N PF04218.13 gi|15920349|ref|NP_376018.1| - 0.00064 19.3 5.4 0.19 11.4 0.2 3.3 3 0 0 3 3 3 1 CENP-B N-terminal DNA-binding domain HTH_21 PF13276.6 gi|15920349|ref|NP_376018.1| - 0.0015 18.6 3.4 0.015 15.4 0.9 3.1 1 1 0 2 2 2 1 HTH-like domain HTH_5 PF01022.20 gi|15920349|ref|NP_376018.1| - 0.0017 18.2 0.0 7.2 6.6 0.0 3.3 3 0 0 3 3 3 0 Bacterial regulatory protein, arsR family RPA_C PF08784.11 gi|15920349|ref|NP_376018.1| - 0.0025 18.4 0.6 3.3 8.4 0.0 3.2 1 1 2 3 3 3 0 Replication protein A C terminal DUF2316 PF10078.9 gi|15920349|ref|NP_376018.1| - 0.0027 17.9 0.1 1.2 9.4 0.0 2.9 1 1 2 3 3 3 1 Uncharacterized protein conserved in bacteria (DUF2316) HTH_Tnp_IS630 PF01710.16 gi|15920349|ref|NP_376018.1| - 0.0028 17.7 3.1 0.0028 17.7 3.1 1.7 1 1 1 2 2 2 1 Transposase HTH_3 PF01381.22 gi|15920349|ref|NP_376018.1| - 0.0038 17.2 3.6 7.9 6.6 0.0 3.6 2 1 2 4 4 4 0 Helix-turn-helix HTH_35 PF13693.6 gi|15920349|ref|NP_376018.1| - 0.0048 16.9 0.3 3.3 7.8 0.1 2.7 2 1 1 3 3 3 0 Winged helix-turn-helix DNA-binding DUF1670 PF07900.11 gi|15920349|ref|NP_376018.1| - 0.0099 15.3 8.5 0.22 10.8 0.4 3.0 2 1 1 3 3 3 2 Protein of unknown function (DUF1670) Ribosomal_S13_N PF08069.12 gi|15920349|ref|NP_376018.1| - 0.013 15.5 4.4 1.3 9.1 0.0 3.3 3 0 0 3 3 3 0 Ribosomal S13/S15 N-terminal domain MarR PF01047.22 gi|15920349|ref|NP_376018.1| - 0.013 15.4 0.3 42 4.2 0.0 3.6 3 1 1 4 4 4 0 MarR family HTH_Tnp_Tc3_2 PF01498.18 gi|15920349|ref|NP_376018.1| - 0.015 15.5 1.0 1.1 9.5 0.2 2.7 1 1 1 2 2 2 0 Transposase DUF2482 PF10655.9 gi|15920349|ref|NP_376018.1| - 0.017 15.6 0.4 0.017 15.6 0.4 2.2 2 1 0 2 2 2 0 Hypothetical protein of unknown function (DUF2482) HTH_10 PF04967.12 gi|15920349|ref|NP_376018.1| - 0.025 14.4 0.2 21 5.0 0.0 3.3 3 0 0 3 3 3 0 HTH DNA binding domain Trp_repressor PF01371.19 gi|15920349|ref|NP_376018.1| - 0.029 14.5 4.5 7.3 6.8 0.3 3.3 1 1 1 3 3 3 0 Trp repressor protein NPA PF16469.5 gi|15920349|ref|NP_376018.1| - 0.035 14.7 1.6 8.2 7.0 0.1 2.4 2 1 0 2 2 2 0 Nematode polyprotein allergen ABA-1 LIN52 PF10044.9 gi|15920349|ref|NP_376018.1| - 0.049 14.4 4.1 0.53 11.0 0.3 2.7 2 1 0 2 2 2 0 Retinal tissue protein RepB PF07506.11 gi|15920349|ref|NP_376018.1| - 0.05 13.7 0.1 0.43 10.6 0.1 2.1 1 1 1 2 2 2 0 RepB plasmid partitioning protein Cpn60_TCP1 PF00118.24 gi|15920349|ref|NP_376018.1| - 0.072 11.7 3.5 0.17 10.4 1.3 1.9 1 1 1 2 2 2 0 TCP-1/cpn60 chaperonin family HTH_AsnC-type PF13404.6 gi|15920349|ref|NP_376018.1| - 0.073 12.9 0.0 6.7 6.6 0.0 3.0 4 0 0 4 4 2 0 AsnC-type helix-turn-helix domain TetR_N PF00440.23 gi|15920349|ref|NP_376018.1| - 0.093 12.5 0.0 19 5.2 0.0 3.0 3 0 0 3 3 3 0 Bacterial regulatory proteins, tetR family HTH_9 PF08221.11 gi|15920349|ref|NP_376018.1| - 0.11 12.6 0.1 1.6 8.9 0.0 2.5 2 1 0 2 2 2 0 RNA polymerase III subunit RPC82 helix-turn-helix domain Herpes_IE2_3 PF03361.14 gi|15920349|ref|NP_376018.1| - 0.13 12.2 2.2 0.26 11.1 0.1 2.0 1 1 1 2 2 2 0 Herpes virus intermediate/early protein 2/3 HTH_36 PF13730.6 gi|15920349|ref|NP_376018.1| - 0.13 12.2 2.4 3.7 7.6 0.0 3.2 3 1 0 3 3 3 0 Helix-turn-helix domain HTH_27 PF13463.6 gi|15920349|ref|NP_376018.1| - 0.14 12.7 1.4 35 5.0 0.1 3.3 3 1 0 3 3 3 0 Winged helix DNA-binding domain NUMOD1 PF07453.13 gi|15920349|ref|NP_376018.1| - 0.16 12.3 6.9 7.2 7.0 0.2 3.2 3 0 0 3 3 3 0 NUMOD1 domain DUF3671 PF12420.8 gi|15920349|ref|NP_376018.1| - 0.18 11.9 6.0 4.5 7.4 0.6 2.4 1 1 1 2 2 2 0 Protein of unknown function Hjc PF01870.18 gi|15920349|ref|NP_376018.1| - 0.19 11.7 2.7 6.3 6.9 0.2 2.5 1 1 1 2 2 2 0 Archaeal holliday junction resolvase (hjc) HrcA_DNA-bdg PF03444.15 gi|15920349|ref|NP_376018.1| - 0.29 10.8 9.0 0.16 11.6 0.5 3.1 2 1 1 3 3 3 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DUF2089 PF09862.9 gi|15920349|ref|NP_376018.1| - 0.78 9.8 5.9 10 6.2 5.3 2.4 1 1 1 2 2 1 0 Protein of unknown function (DUF2089) YabA PF06156.13 gi|15920349|ref|NP_376018.1| - 0.97 10.1 4.6 12 6.6 2.5 2.2 1 1 1 2 2 2 0 Initiation control protein YabA LysE PF01810.18 gi|15920350|ref|NP_376019.1| - 5.9e-10 38.9 16.6 1.4e-09 37.7 16.6 1.6 1 1 0 1 1 1 1 LysE type translocator 5-FTHF_cyc-lig PF01812.20 gi|15920351|ref|NP_376020.1| - 9.7e-33 113.6 0.0 1.2e-32 113.3 0.0 1.1 1 0 0 1 1 1 1 5-formyltetrahydrofolate cyclo-ligase family TrmB PF01978.19 gi|15920352|ref|NP_376021.1| - 1.9e-15 56.5 0.1 2.8e-15 56.0 0.1 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|15920352|ref|NP_376021.1| - 6.2e-08 32.4 0.0 1e-07 31.7 0.0 1.4 1 0 0 1 1 1 1 MarR family TFIIE_alpha PF02002.17 gi|15920352|ref|NP_376021.1| - 8.9e-07 28.7 0.1 1.1e-06 28.4 0.1 1.1 1 0 0 1 1 1 1 TFIIE alpha subunit MarR PF01047.22 gi|15920352|ref|NP_376021.1| - 4.1e-06 26.6 0.1 7.4e-06 25.8 0.1 1.5 1 0 0 1 1 1 1 MarR family Fe_dep_repress PF01325.19 gi|15920352|ref|NP_376021.1| - 3.3e-05 24.0 0.1 5.1e-05 23.4 0.1 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_5 PF01022.20 gi|15920352|ref|NP_376021.1| - 6.1e-05 22.8 1.1 0.00024 20.9 0.2 2.2 2 1 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|15920352|ref|NP_376021.1| - 0.00024 21.1 0.1 0.00074 19.5 0.0 1.9 2 1 0 2 2 2 1 Helix-turn-helix domain HTH_27 PF13463.6 gi|15920352|ref|NP_376021.1| - 0.00055 20.4 0.1 0.0014 19.0 0.0 1.7 2 0 0 2 2 2 1 Winged helix DNA-binding domain DUF4423 PF14394.6 gi|15920352|ref|NP_376021.1| - 0.001 18.8 0.1 0.0016 18.2 0.1 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_36 PF13730.6 gi|15920352|ref|NP_376021.1| - 0.0016 18.4 1.2 0.002 18.0 0.3 1.8 2 1 0 2 2 2 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|15920352|ref|NP_376021.1| - 0.002 17.7 0.1 0.0035 16.9 0.1 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Rrf2 PF02082.20 gi|15920352|ref|NP_376021.1| - 0.0021 18.4 0.1 0.0033 17.8 0.1 1.3 1 0 0 1 1 1 1 Transcriptional regulator DUF2250 PF10007.9 gi|15920352|ref|NP_376021.1| - 0.0028 17.7 0.3 0.0052 16.9 0.2 1.6 1 1 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_Crp_2 PF13545.6 gi|15920352|ref|NP_376021.1| - 0.0052 16.7 0.0 0.01 15.8 0.0 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_23 PF13384.6 gi|15920352|ref|NP_376021.1| - 0.0068 16.2 0.0 0.012 15.3 0.0 1.4 1 1 0 1 1 1 1 Homeodomain-like domain HTH_34 PF13601.6 gi|15920352|ref|NP_376021.1| - 0.0079 16.3 0.6 0.028 14.6 0.6 1.9 1 1 0 1 1 1 1 Winged helix DNA-binding domain HTH_micro PF17007.5 gi|15920352|ref|NP_376021.1| - 0.018 13.9 0.6 0.019 13.8 0.6 1.1 1 0 0 1 1 1 0 HTH-like PadR PF03551.14 gi|15920352|ref|NP_376021.1| - 0.021 14.8 0.0 0.032 14.2 0.0 1.5 1 1 0 1 1 1 0 Transcriptional regulator PadR-like family RPA_C PF08784.11 gi|15920352|ref|NP_376021.1| - 0.021 15.5 0.1 0.075 13.7 0.0 1.7 2 0 0 2 2 2 0 Replication protein A C terminal tRNA-synt_His PF13393.6 gi|15920352|ref|NP_376021.1| - 0.022 14.0 0.0 0.031 13.5 0.0 1.3 2 0 0 2 2 2 0 Histidyl-tRNA synthetase HTH_CodY PF08222.11 gi|15920352|ref|NP_376021.1| - 0.033 13.7 0.1 0.055 13.0 0.1 1.5 1 0 0 1 1 1 0 CodY helix-turn-helix domain RP-C PF03428.13 gi|15920352|ref|NP_376021.1| - 0.035 13.8 0.0 0.062 12.9 0.0 1.4 1 0 0 1 1 1 0 Replication protein C N-terminal domain DUF2802 PF10975.8 gi|15920352|ref|NP_376021.1| - 0.057 13.6 1.4 3 8.0 0.0 2.9 3 0 0 3 3 3 0 Protein of unknown function (DUF2802) Cdc6_C PF09079.11 gi|15920352|ref|NP_376021.1| - 0.068 13.2 0.0 0.13 12.3 0.0 1.6 1 0 0 1 1 1 0 CDC6, C terminal winged helix domain Sigma70_r4 PF04545.16 gi|15920352|ref|NP_376021.1| - 0.083 12.4 0.0 0.17 11.4 0.0 1.7 1 1 0 1 1 1 0 Sigma-70, region 4 CAS_C PF12026.8 gi|15920352|ref|NP_376021.1| - 0.093 12.8 0.1 0.15 12.1 0.1 1.3 1 0 0 1 1 1 0 Crk-Associated Substrate C-terminal domain HTH_10 PF04967.12 gi|15920352|ref|NP_376021.1| - 0.12 12.2 0.5 0.73 9.7 0.2 2.1 1 1 1 2 2 2 0 HTH DNA binding domain DUF92 PF01940.16 gi|15920352|ref|NP_376021.1| - 0.17 11.3 0.0 0.2 11.0 0.0 1.1 1 0 0 1 1 1 0 Integral membrane protein DUF92 HTH_IclR PF09339.10 gi|15920352|ref|NP_376021.1| - 0.18 11.6 0.0 0.27 11.1 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain ParA PF10609.9 gi|15920353|ref|NP_376022.1| - 9.3e-96 320.0 0.0 1.1e-95 319.8 0.0 1.0 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CbiA PF01656.23 gi|15920353|ref|NP_376022.1| - 2.5e-13 50.2 0.0 5.9e-12 45.8 0.0 2.5 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain AAA_31 PF13614.6 gi|15920353|ref|NP_376022.1| - 1.6e-08 34.7 0.5 4e-06 26.9 0.1 2.2 2 0 0 2 2 2 2 AAA domain Fer4_NifH PF00142.18 gi|15920353|ref|NP_376022.1| - 3.4e-08 33.3 0.0 0.00014 21.4 0.1 2.3 2 1 0 2 2 2 2 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family ArsA_ATPase PF02374.15 gi|15920353|ref|NP_376022.1| - 1.9e-05 24.0 1.2 0.0001 21.6 0.6 2.1 2 0 0 2 2 2 1 Anion-transporting ATPase MipZ PF09140.11 gi|15920353|ref|NP_376022.1| - 3.2e-05 23.3 0.0 4.3e-05 22.9 0.0 1.3 1 0 0 1 1 1 1 ATPase MipZ AAA_26 PF13500.6 gi|15920353|ref|NP_376022.1| - 0.00074 19.4 1.0 0.11 12.3 0.0 2.3 2 0 0 2 2 2 2 AAA domain MeaB PF03308.16 gi|15920353|ref|NP_376022.1| - 0.00078 18.5 0.2 0.0013 17.8 0.2 1.3 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_25 PF13481.6 gi|15920353|ref|NP_376022.1| - 0.0028 17.2 0.0 0.0042 16.7 0.0 1.3 1 0 0 1 1 1 1 AAA domain IstB_IS21 PF01695.17 gi|15920353|ref|NP_376022.1| - 0.077 12.7 0.5 0.2 11.4 0.5 1.6 1 1 0 1 1 1 0 IstB-like ATP binding protein CBP_BcsQ PF06564.12 gi|15920353|ref|NP_376022.1| - 0.083 12.3 0.0 0.29 10.6 0.0 1.8 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsQ RsgA_GTPase PF03193.16 gi|15920353|ref|NP_376022.1| - 0.1 12.5 0.1 0.2 11.6 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_18 PF13238.6 gi|15920354|ref|NP_376023.1| - 5.9e-20 72.1 0.1 1.3e-19 71.0 0.0 1.5 2 0 0 2 2 2 1 AAA domain AAA_5 PF07728.14 gi|15920354|ref|NP_376023.1| - 1e-06 28.8 0.0 2.2e-06 27.7 0.0 1.5 2 0 0 2 2 1 1 AAA domain (dynein-related subfamily) AAA_17 PF13207.6 gi|15920354|ref|NP_376023.1| - 3.8e-06 27.4 0.1 2.3e-05 24.8 0.0 2.3 1 1 0 2 2 2 1 AAA domain AAA PF00004.29 gi|15920354|ref|NP_376023.1| - 0.00023 21.6 0.0 0.00087 19.7 0.0 2.0 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 gi|15920354|ref|NP_376023.1| - 0.0003 20.8 0.0 0.00045 20.2 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain NTPase_1 PF03266.15 gi|15920354|ref|NP_376023.1| - 0.00037 20.5 1.9 0.001 19.0 0.1 2.3 1 1 2 3 3 3 1 NTPase DUF2075 PF09848.9 gi|15920354|ref|NP_376023.1| - 0.00061 19.1 0.0 0.00079 18.8 0.0 1.2 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) KTI12 PF08433.10 gi|15920354|ref|NP_376023.1| - 0.00069 19.1 0.0 0.0011 18.5 0.0 1.4 1 0 0 1 1 1 1 Chromatin associated protein KTI12 dNK PF01712.19 gi|15920354|ref|NP_376023.1| - 0.0007 19.5 0.6 0.0044 16.9 0.1 2.2 1 1 1 2 2 2 1 Deoxynucleoside kinase AAA_29 PF13555.6 gi|15920354|ref|NP_376023.1| - 0.0009 18.9 0.7 0.0019 17.9 0.7 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_33 PF13671.6 gi|15920354|ref|NP_376023.1| - 0.0014 18.8 0.0 0.0023 18.1 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_28 PF13521.6 gi|15920354|ref|NP_376023.1| - 0.0016 18.7 0.1 0.0026 18.0 0.1 1.5 1 1 0 1 1 1 1 AAA domain PRK PF00485.18 gi|15920354|ref|NP_376023.1| - 0.002 17.9 0.0 0.0032 17.2 0.0 1.4 1 0 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family AAA_22 PF13401.6 gi|15920354|ref|NP_376023.1| - 0.0033 17.7 0.1 0.0064 16.8 0.1 1.9 1 1 0 1 1 1 1 AAA domain MeaB PF03308.16 gi|15920354|ref|NP_376023.1| - 0.0036 16.3 0.2 0.009 15.0 0.1 1.7 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_16 PF13191.6 gi|15920354|ref|NP_376023.1| - 0.0047 17.3 0.0 0.0061 17.0 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain AAA_14 PF13173.6 gi|15920354|ref|NP_376023.1| - 0.0051 16.8 0.9 0.018 15.1 0.1 2.1 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.6 gi|15920354|ref|NP_376023.1| - 0.007 16.1 2.9 0.03 14.1 2.8 1.8 1 1 0 1 1 1 1 AAA ATPase domain ABC_tran PF00005.27 gi|15920354|ref|NP_376023.1| - 0.0074 16.8 0.2 0.01 16.4 0.2 1.6 1 1 0 1 1 1 1 ABC transporter Zeta_toxin PF06414.12 gi|15920354|ref|NP_376023.1| - 0.0078 15.5 0.0 0.011 15.0 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin APS_kinase PF01583.20 gi|15920354|ref|NP_376023.1| - 0.0091 15.9 0.0 0.02 14.8 0.0 1.6 2 0 0 2 2 1 1 Adenylylsulphate kinase Viral_helicase1 PF01443.18 gi|15920354|ref|NP_376023.1| - 0.011 15.5 0.0 0.016 15.0 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase RNA_helicase PF00910.22 gi|15920354|ref|NP_376023.1| - 0.011 16.1 0.0 0.024 15.0 0.0 1.6 1 0 0 1 1 1 0 RNA helicase SKI PF01202.22 gi|15920354|ref|NP_376023.1| - 0.015 15.4 0.2 0.033 14.3 0.2 1.7 1 1 0 1 1 1 0 Shikimate kinase Cytidylate_kin PF02224.18 gi|15920354|ref|NP_376023.1| - 0.024 14.4 0.0 0.078 12.7 0.0 1.9 2 0 0 2 2 2 0 Cytidylate kinase ATPase PF06745.13 gi|15920354|ref|NP_376023.1| - 0.032 13.6 2.4 2.8 7.2 0.1 2.3 2 1 0 2 2 2 0 KaiC AAA_19 PF13245.6 gi|15920354|ref|NP_376023.1| - 0.042 14.2 0.1 0.081 13.3 0.1 1.7 1 1 0 1 1 1 0 AAA domain RuvB_N PF05496.12 gi|15920354|ref|NP_376023.1| - 0.045 13.5 0.1 0.14 11.9 0.0 1.8 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain Thymidylate_kin PF02223.17 gi|15920354|ref|NP_376023.1| - 0.053 13.2 0.2 1.6 8.4 0.1 2.1 1 1 1 2 2 2 0 Thymidylate kinase SMC_N PF02463.19 gi|15920354|ref|NP_376023.1| - 0.053 13.0 0.1 0.1 12.0 0.1 1.6 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain Ploopntkinase3 PF18751.1 gi|15920354|ref|NP_376023.1| - 0.057 13.3 0.0 0.11 12.4 0.0 1.6 1 0 0 1 1 1 0 P-loop Nucleotide Kinase3 MMR_HSR1 PF01926.23 gi|15920354|ref|NP_376023.1| - 0.08 13.0 0.0 0.18 11.9 0.0 1.6 1 1 0 1 1 1 0 50S ribosome-binding GTPase T2SSE PF00437.20 gi|15920354|ref|NP_376023.1| - 0.089 11.8 0.6 0.21 10.6 0.4 1.6 2 0 0 2 2 2 0 Type II/IV secretion system protein ADK PF00406.22 gi|15920354|ref|NP_376023.1| - 0.1 12.7 0.1 0.19 11.8 0.1 1.8 1 1 0 1 1 1 0 Adenylate kinase Cytidylate_kin2 PF13189.6 gi|15920354|ref|NP_376023.1| - 0.1 12.7 0.1 0.2 11.7 0.1 1.6 1 1 0 1 1 1 0 Cytidylate kinase-like family AAA_30 PF13604.6 gi|15920354|ref|NP_376023.1| - 0.1 12.3 0.2 0.36 10.5 0.1 1.8 1 1 1 2 2 2 0 AAA domain NACHT PF05729.12 gi|15920354|ref|NP_376023.1| - 0.1 12.5 0.1 0.2 11.5 0.1 1.5 1 1 0 1 1 1 0 NACHT domain CPT PF07931.12 gi|15920354|ref|NP_376023.1| - 0.12 12.2 0.0 0.18 11.7 0.0 1.4 1 0 0 1 1 1 0 Chloramphenicol phosphotransferase-like protein cobW PF02492.19 gi|15920354|ref|NP_376023.1| - 0.17 11.5 1.9 0.33 10.5 0.4 2.1 1 1 1 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain AAA_23 PF13476.6 gi|15920354|ref|NP_376023.1| - 0.34 11.4 4.1 0.68 10.4 4.1 1.8 1 1 0 1 1 1 0 AAA domain Rhomboid PF01694.22 gi|15920355|ref|NP_376024.1| - 5.2e-19 68.7 9.1 5.2e-19 68.7 9.1 1.6 2 0 0 2 2 2 1 Rhomboid family Peptidase_M50 PF02163.22 gi|15920356|ref|NP_376025.1| - 1.3e-06 27.9 4.2 9.1e-05 21.8 0.3 2.2 1 1 1 2 2 2 2 Peptidase family M50 2TM PF13239.6 gi|15920356|ref|NP_376025.1| - 0.53 10.6 6.0 1.9 8.8 6.0 1.8 1 1 0 1 1 1 0 2TM domain ACT_7 PF13840.6 gi|15920357|ref|NP_376026.1| - 0.048 13.4 0.0 0.099 12.5 0.0 1.5 1 0 0 1 1 1 0 ACT domain ThiP_synth PF10120.9 gi|15920358|ref|NP_376027.1| - 6.6e-51 172.2 0.0 8.8e-51 171.8 0.0 1.2 1 0 0 1 1 1 1 Thiamine-phosphate synthase HTH_37 PF13744.6 gi|15920358|ref|NP_376027.1| - 0.00099 19.0 0.0 0.0022 17.9 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 gi|15920358|ref|NP_376027.1| - 0.0058 16.4 0.1 0.016 15.0 0.0 1.7 2 0 0 2 2 2 1 Homeodomain-like domain DUF4099 PF13351.6 gi|15920358|ref|NP_376027.1| - 0.03 14.6 0.1 0.059 13.6 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4099) Sigma70_r4_2 PF08281.12 gi|15920358|ref|NP_376027.1| - 0.055 13.1 0.0 0.11 12.1 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 YdaS_antitoxin PF15943.5 gi|15920358|ref|NP_376027.1| - 0.11 12.3 0.0 0.38 10.7 0.0 1.9 2 0 0 2 2 2 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT NurA PF09376.10 gi|15920359|ref|NP_376028.1| - 5.3e-13 49.2 0.3 5.3e-06 26.3 0.0 2.2 1 1 1 2 2 2 2 NurA domain DUF87 PF01935.17 gi|15920360|ref|NP_376029.1| - 3.1e-20 73.2 3.5 5.5e-20 72.4 1.8 2.0 1 1 1 2 2 2 1 Helicase HerA, central domain FAM83 PF07894.12 gi|15920360|ref|NP_376029.1| - 0.061 12.9 0.0 0.15 11.6 0.0 1.6 1 0 0 1 1 1 0 FAM83 A-H PCMT PF01135.19 gi|15920361|ref|NP_376030.1| - 5.5e-40 137.4 0.0 6.3e-40 137.2 0.0 1.0 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RrnaAD PF00398.20 gi|15920361|ref|NP_376030.1| - 8.2e-09 34.9 0.1 1.2e-08 34.4 0.1 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_25 PF13649.6 gi|15920361|ref|NP_376030.1| - 1.4e-06 28.9 0.0 2.9e-06 27.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|15920361|ref|NP_376030.1| - 3.8e-06 26.8 0.0 5.4e-06 26.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|15920361|ref|NP_376030.1| - 3.5e-05 23.3 0.0 4.9e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) DOT1 PF08123.13 gi|15920361|ref|NP_376030.1| - 0.00013 21.5 0.1 0.0002 21.0 0.1 1.2 1 0 0 1 1 1 1 Histone methylation protein DOT1 MTS PF05175.14 gi|15920361|ref|NP_376030.1| - 0.00017 21.2 0.0 0.00023 20.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.12 gi|15920361|ref|NP_376030.1| - 0.00023 21.8 0.0 0.00065 20.3 0.0 1.8 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|15920361|ref|NP_376030.1| - 0.00054 19.8 0.0 0.00062 19.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Fibrillarin PF01269.17 gi|15920361|ref|NP_376030.1| - 0.0015 17.7 0.0 0.0022 17.1 0.0 1.2 1 0 0 1 1 1 1 Fibrillarin Methyltransf_18 PF12847.7 gi|15920361|ref|NP_376030.1| - 0.0025 17.7 0.0 0.0042 17.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain GCD14 PF08704.10 gi|15920361|ref|NP_376030.1| - 0.0033 17.1 0.0 0.0044 16.7 0.0 1.2 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit Methyltransf_12 PF08242.12 gi|15920361|ref|NP_376030.1| - 0.0054 17.4 0.0 0.011 16.4 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 gi|15920361|ref|NP_376030.1| - 0.011 15.5 0.1 0.025 14.3 0.1 1.4 1 1 0 1 1 1 0 Met-10+ like-protein CMAS PF02353.20 gi|15920361|ref|NP_376030.1| - 0.054 12.8 0.0 0.081 12.2 0.0 1.2 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase Methyltransf_3 PF01596.17 gi|15920361|ref|NP_376030.1| - 0.069 12.3 0.1 0.094 11.9 0.1 1.2 1 0 0 1 1 1 0 O-methyltransferase DUF5066 PF16728.5 gi|15920361|ref|NP_376030.1| - 0.11 11.8 0.1 0.33 10.2 0.0 1.8 2 1 0 2 2 2 0 Domain of unknown function (DUF5066) Methyltransf_16 PF10294.9 gi|15920361|ref|NP_376030.1| - 0.11 12.2 0.1 0.19 11.4 0.1 1.4 1 0 0 1 1 1 0 Lysine methyltransferase TauE PF01925.19 gi|15920362|ref|NP_376031.1| - 9e-39 133.5 32.5 1.2e-38 133.1 32.5 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE MctB PF11382.8 gi|15920362|ref|NP_376031.1| - 0.44 10.2 3.7 1.1 8.9 3.7 1.6 1 0 0 1 1 1 0 Copper transport outer membrane protein, MctB Glycos_transf_2 PF00535.26 gi|15920363|ref|NP_376032.1| - 2.1e-08 34.2 0.0 2.8e-08 33.8 0.0 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|15920363|ref|NP_376032.1| - 1.7e-06 27.7 0.6 0.00031 20.3 0.2 2.2 1 1 0 2 2 2 2 Glycosyltransferase like family 2 Glyco_tranf_2_3 PF13641.6 gi|15920363|ref|NP_376032.1| - 0.00029 20.8 0.0 0.63 9.9 0.0 2.1 2 0 0 2 2 2 2 Glycosyltransferase like family 2 Anp1 PF03452.14 gi|15920363|ref|NP_376032.1| - 0.0062 16.0 0.3 0.0088 15.5 0.3 1.2 1 0 0 1 1 1 1 Anp1 Glyco_transf_8 PF01501.20 gi|15920363|ref|NP_376032.1| - 0.0093 15.5 0.2 0.013 15.0 0.2 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 8 Mg296 PF09644.10 gi|15920363|ref|NP_376032.1| - 0.015 15.4 0.9 0.048 13.8 0.4 1.7 1 1 1 2 2 2 0 Mg296 protein Glyco_tranf_2_4 PF13704.6 gi|15920363|ref|NP_376032.1| - 0.13 12.8 0.0 0.23 12.0 0.0 1.4 1 0 0 1 1 1 0 Glycosyl transferase family 2 Glyco_transf_21 PF13506.6 gi|15920363|ref|NP_376032.1| - 0.16 11.5 0.0 1.8 8.0 0.0 2.1 1 1 1 2 2 2 0 Glycosyl transferase family 21 Glycos_transf_1 PF00534.20 gi|15920364|ref|NP_376033.1| - 7e-18 64.7 0.2 1.1e-17 64.1 0.2 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|15920364|ref|NP_376033.1| - 1.9e-07 31.6 0.0 3.4e-07 30.7 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|15920364|ref|NP_376033.1| - 0.016 15.2 0.0 0.024 14.6 0.0 1.5 1 0 0 1 1 1 0 Glycosyltransferase Family 4 Epimerase PF01370.21 gi|15920365|ref|NP_376034.1| - 4.8e-45 153.9 0.2 6.2e-45 153.5 0.2 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|15920365|ref|NP_376034.1| - 6.2e-42 144.2 0.5 5.5e-41 141.1 0.5 2.0 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase 3Beta_HSD PF01073.19 gi|15920365|ref|NP_376034.1| - 1.3e-13 50.6 0.3 1.9e-13 50.1 0.3 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family RmlD_sub_bind PF04321.17 gi|15920365|ref|NP_376034.1| - 1.1e-11 44.4 0.0 1.3e-11 44.2 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain Polysacc_synt_2 PF02719.15 gi|15920365|ref|NP_376034.1| - 1e-08 34.7 0.3 7e-07 28.7 0.3 2.8 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 gi|15920365|ref|NP_376034.1| - 1.1e-06 28.0 0.2 0.00024 20.4 0.0 2.2 2 0 0 2 2 2 2 Male sterility protein KR PF08659.10 gi|15920365|ref|NP_376034.1| - 0.0002 21.3 0.1 0.0034 17.3 0.0 2.1 2 0 0 2 2 2 1 KR domain NAD_binding_10 PF13460.6 gi|15920365|ref|NP_376034.1| - 0.0015 18.5 0.0 0.0041 17.0 0.0 1.7 1 1 0 1 1 1 1 NAD(P)H-binding NmrA PF05368.13 gi|15920365|ref|NP_376034.1| - 0.011 15.4 0.4 0.9 9.0 0.3 2.7 2 1 0 2 2 2 0 NmrA-like family 3HCDH_N PF02737.18 gi|15920365|ref|NP_376034.1| - 0.13 12.2 0.0 0.2 11.5 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Ribosomal_S8e PF01201.22 gi|15920366|ref|NP_376035.1| - 2.3e-35 121.8 0.7 2.5e-35 121.6 0.7 1.0 1 0 0 1 1 1 1 Ribosomal protein S8e Prenyltransf PF01255.19 gi|15920367|ref|NP_376036.1| - 4.6e-65 219.3 0.2 5.3e-65 219.1 0.2 1.0 1 0 0 1 1 1 1 Putative undecaprenyl diphosphate synthase Baculo_LEF-2 PF03041.14 gi|15920367|ref|NP_376036.1| - 0.022 14.4 0.2 0.091 12.4 0.1 1.9 2 0 0 2 2 2 0 lef-2 Peptidase_M20 PF01546.28 gi|15920368|ref|NP_376037.1| - 4.3e-29 101.7 0.0 5.2e-29 101.4 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|15920368|ref|NP_376037.1| - 2.8e-06 27.2 0.0 6.2e-06 26.1 0.0 1.6 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 gi|15920368|ref|NP_376037.1| - 4.1e-05 23.4 0.0 5.9e-05 22.8 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M28 DUF3237 PF11578.8 gi|15920368|ref|NP_376037.1| - 0.09 12.6 0.0 0.21 11.4 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3237) Aminotran_3 PF00202.21 gi|15920369|ref|NP_376038.1| - 4.9e-105 351.5 0.0 6.7e-105 351.1 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_5 PF00266.19 gi|15920369|ref|NP_376038.1| - 3.9e-05 22.8 0.1 0.00012 21.1 0.0 1.7 1 1 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 gi|15920369|ref|NP_376038.1| - 0.0005 19.4 0.0 0.001 18.3 0.0 1.4 1 1 0 1 1 1 1 Aminotransferase class I and II PC_rep PF01851.22 gi|15920369|ref|NP_376038.1| - 0.023 15.1 0.0 0.13 12.8 0.0 2.3 2 0 0 2 2 2 0 Proteasome/cyclosome repeat RimK PF08443.11 gi|15920370|ref|NP_376039.1| - 6.9e-33 113.8 0.0 1.1e-32 113.2 0.0 1.3 1 0 0 1 1 1 1 RimK-like ATP-grasp domain GSH-S_ATP PF02955.16 gi|15920370|ref|NP_376039.1| - 4.6e-12 45.7 0.0 6.5e-12 45.2 0.0 1.2 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATPgrasp_ST PF14397.6 gi|15920370|ref|NP_376039.1| - 4e-07 29.6 0.0 8.6e-06 25.2 0.0 2.1 2 0 0 2 2 2 1 Sugar-transfer associated ATP-grasp ATP-grasp_3 PF02655.14 gi|15920370|ref|NP_376039.1| - 1e-06 28.9 0.0 1.7e-06 28.2 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain ATP-grasp_5 PF13549.6 gi|15920370|ref|NP_376039.1| - 1.9e-05 24.2 0.0 3.2e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|15920370|ref|NP_376039.1| - 0.00031 20.3 0.0 0.005 16.4 0.0 2.3 1 1 0 1 1 1 1 D-ala D-ala ligase C-terminus CPSase_L_D2 PF02786.17 gi|15920370|ref|NP_376039.1| - 0.00034 20.2 0.0 0.00062 19.3 0.0 1.4 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain ATP-grasp PF02222.22 gi|15920370|ref|NP_376039.1| - 0.00063 19.4 0.0 0.0013 18.4 0.0 1.5 1 1 0 1 1 1 1 ATP-grasp domain Synapsin_C PF02750.14 gi|15920370|ref|NP_376039.1| - 0.0012 18.4 0.1 0.19 11.2 0.0 2.1 1 1 1 2 2 2 2 Synapsin, ATP binding domain ATPgrasp_YheCD PF14398.6 gi|15920370|ref|NP_376039.1| - 0.0012 18.2 0.2 0.036 13.3 0.0 2.3 2 0 0 2 2 2 1 YheC/D like ATP-grasp ATP-grasp_2 PF08442.10 gi|15920370|ref|NP_376039.1| - 0.0051 16.4 0.0 0.0096 15.5 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain zinc_ribbon_4 PF13717.6 gi|15920371|ref|NP_376040.1| - 0.035 14.0 0.1 0.052 13.5 0.1 1.3 1 0 0 1 1 1 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|15920371|ref|NP_376040.1| - 0.11 12.0 1.6 0.21 11.2 1.6 1.5 1 1 0 1 1 1 0 TFIIB zinc-binding HTH_24 PF13412.6 gi|15920372|ref|NP_376041.1| - 1.4e-16 59.8 2.3 7.2e-16 57.5 0.9 2.2 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|15920372|ref|NP_376041.1| - 2.7e-14 52.7 0.0 9.8e-14 50.9 0.2 1.8 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain AsnC_trans_reg PF01037.21 gi|15920372|ref|NP_376041.1| - 6.7e-13 48.4 0.1 1.1e-12 47.7 0.1 1.4 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_11 PF08279.12 gi|15920372|ref|NP_376041.1| - 3.5e-07 30.1 2.3 9e-07 28.8 0.5 2.3 3 0 0 3 3 3 1 HTH domain HTH_Mga PF08280.11 gi|15920372|ref|NP_376041.1| - 1e-05 25.5 0.2 2.2e-05 24.4 0.2 1.7 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain MarR PF01047.22 gi|15920372|ref|NP_376041.1| - 3.3e-05 23.7 0.1 0.00016 21.5 0.1 2.0 2 0 0 2 2 2 1 MarR family NapD PF03927.13 gi|15920372|ref|NP_376041.1| - 6.4e-05 22.9 0.1 0.00012 22.1 0.1 1.4 1 0 0 1 1 1 1 NapD protein HTH_5 PF01022.20 gi|15920372|ref|NP_376041.1| - 0.00016 21.5 0.1 0.00025 20.9 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family DUF2250 PF10007.9 gi|15920372|ref|NP_376041.1| - 0.00036 20.6 0.1 0.00075 19.6 0.1 1.6 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) TrmB PF01978.19 gi|15920372|ref|NP_376041.1| - 0.00094 19.0 0.4 0.0024 17.7 0.2 1.7 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB DUF4423 PF14394.6 gi|15920372|ref|NP_376041.1| - 0.0011 18.7 0.2 0.0018 18.0 0.2 1.7 1 1 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_20 PF12840.7 gi|15920372|ref|NP_376041.1| - 0.0022 18.0 0.0 0.0035 17.4 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_DeoR PF08220.12 gi|15920372|ref|NP_376041.1| - 0.0026 17.4 0.2 0.0047 16.6 0.2 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_27 PF13463.6 gi|15920372|ref|NP_376041.1| - 0.0059 17.1 0.1 0.011 16.3 0.1 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain Fe_dep_repress PF01325.19 gi|15920372|ref|NP_376041.1| - 0.007 16.5 0.1 0.015 15.5 0.1 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain TFIIE_alpha PF02002.17 gi|15920372|ref|NP_376041.1| - 0.0076 16.1 0.2 0.011 15.5 0.2 1.4 1 0 0 1 1 1 1 TFIIE alpha subunit Rio2_N PF09202.11 gi|15920372|ref|NP_376041.1| - 0.0097 16.1 0.2 0.13 12.5 0.1 2.2 2 0 0 2 2 2 1 Rio2, N-terminal FeoC PF09012.10 gi|15920372|ref|NP_376041.1| - 0.0097 16.0 0.0 0.016 15.3 0.0 1.2 1 0 0 1 1 1 1 FeoC like transcriptional regulator Sigma70_r4_2 PF08281.12 gi|15920372|ref|NP_376041.1| - 0.01 15.5 0.1 0.019 14.6 0.1 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 MarR_2 PF12802.7 gi|15920372|ref|NP_376041.1| - 0.01 15.7 0.0 0.017 15.0 0.0 1.3 1 0 0 1 1 1 0 MarR family Mga PF05043.13 gi|15920372|ref|NP_376041.1| - 0.016 15.8 0.4 0.035 14.7 0.1 1.7 2 0 0 2 2 1 0 Mga helix-turn-helix domain HTH_23 PF13384.6 gi|15920372|ref|NP_376041.1| - 0.017 14.9 0.0 0.16 11.8 0.1 2.1 2 0 0 2 2 2 0 Homeodomain-like domain HTH_45 PF14947.6 gi|15920372|ref|NP_376041.1| - 0.022 14.7 1.1 0.034 14.1 0.3 1.7 2 0 0 2 2 2 0 Winged helix-turn-helix DMAP1_like PF17024.5 gi|15920372|ref|NP_376041.1| - 0.025 14.7 0.1 0.043 13.9 0.1 1.5 1 0 0 1 1 1 0 Putative DMAP1-like PAX PF00292.18 gi|15920372|ref|NP_376041.1| - 0.028 14.3 1.0 0.55 10.2 1.0 2.2 1 1 0 1 1 1 0 'Paired box' domain Rrf2 PF02082.20 gi|15920372|ref|NP_376041.1| - 0.04 14.3 0.1 0.1 13.0 0.1 1.6 1 0 0 1 1 1 0 Transcriptional regulator HTH_34 PF13601.6 gi|15920372|ref|NP_376041.1| - 0.042 14.0 0.1 0.072 13.3 0.1 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_36 PF13730.6 gi|15920372|ref|NP_376041.1| - 0.044 13.7 0.1 0.081 12.9 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain Sigma70_r4 PF04545.16 gi|15920372|ref|NP_376041.1| - 0.059 12.9 0.0 0.11 12.1 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_6 PF01418.17 gi|15920372|ref|NP_376041.1| - 0.11 12.5 0.1 0.25 11.3 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family NTase_sub_bind PF08780.11 gi|15920372|ref|NP_376041.1| - 0.13 12.2 0.2 0.31 11.0 0.1 1.7 1 1 1 2 2 2 0 Nucleotidyltransferase substrate binding protein like AsnC_trans_reg2 PF17805.1 gi|15920372|ref|NP_376041.1| - 0.14 12.4 0.0 0.3 11.3 0.0 1.5 2 0 0 2 2 1 0 AsnC-like ligand binding domain AA_kinase PF00696.28 gi|15920373|ref|NP_376042.1| - 2.4e-28 99.4 3.1 2.7e-28 99.2 3.1 1.0 1 0 0 1 1 1 1 Amino acid kinase family Semialdhyde_dh PF01118.24 gi|161751104|ref|NP_376043.2| - 7.6e-36 123.2 0.0 7.4e-35 120.0 0.0 2.2 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.18 gi|161751104|ref|NP_376043.2| - 2.7e-07 30.9 0.0 3.6e-07 30.4 0.0 1.1 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain Penicillinase_R PF03965.16 gi|15920375|ref|NP_376044.1| - 0.036 14.4 0.1 0.07 13.5 0.1 1.5 1 0 0 1 1 1 0 Penicillinase repressor DUF3896 PF13035.6 gi|15920375|ref|NP_376044.1| - 2.2 8.5 7.9 0.28 11.4 1.5 2.7 2 2 0 2 2 2 0 Protein of unknown function (DUF3896) AAA_10 PF12846.7 gi|15920376|ref|NP_376045.1| - 5.5e-13 48.6 0.5 2.3e-10 39.9 0.1 2.3 2 0 0 2 2 2 2 AAA-like domain DUF87 PF01935.17 gi|15920376|ref|NP_376045.1| - 2.9e-06 27.5 1.8 2.9e-06 27.5 1.8 2.6 2 1 0 2 2 2 1 Helicase HerA, central domain DUF853 PF05872.12 gi|15920376|ref|NP_376045.1| - 0.00038 19.2 0.0 0.4 9.2 0.0 2.2 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) ResIII PF04851.15 gi|15920376|ref|NP_376045.1| - 0.00055 20.0 0.3 0.0041 17.1 0.3 2.2 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit IstB_IS21 PF01695.17 gi|15920376|ref|NP_376045.1| - 0.0088 15.8 0.0 0.032 14.0 0.0 1.9 2 0 0 2 2 2 1 IstB-like ATP binding protein FtsK_SpoIIIE PF01580.18 gi|15920376|ref|NP_376045.1| - 0.031 13.6 0.0 0.13 11.6 0.0 1.9 2 0 0 2 2 2 0 FtsK/SpoIIIE family SIS PF01380.22 gi|15920377|ref|NP_376046.1| - 2.1e-17 63.2 0.2 3.7e-17 62.4 0.2 1.4 1 0 0 1 1 1 1 SIS domain SIS_2 PF13580.6 gi|15920377|ref|NP_376046.1| - 1.1e-07 31.9 1.3 2.4e-05 24.4 0.4 2.3 1 1 1 2 2 2 2 SIS domain PRMT5 PF05185.16 gi|15920377|ref|NP_376046.1| - 0.0011 18.8 0.9 1.4 8.8 0.1 2.3 1 1 1 2 2 2 2 PRMT5 arginine-N-methyltransferase CAF1A PF12253.8 gi|15920378|ref|NP_376047.1| - 0.12 12.5 6.8 0.18 12.0 6.8 1.3 1 0 0 1 1 1 0 Chromatin assembly factor 1 subunit A zf-C2H2_4 PF13894.6 gi|15920378|ref|NP_376047.1| - 1 10.4 5.1 8 7.6 0.1 2.4 2 0 0 2 2 2 0 C2H2-type zinc finger zf-C2H2 PF00096.26 gi|15920378|ref|NP_376047.1| - 1.2 9.7 4.8 13 6.5 0.0 2.3 2 0 0 2 2 2 0 Zinc finger, C2H2 type KRTDAP PF15200.6 gi|15920379|ref|NP_376048.1| - 0.14 12.0 0.0 0.24 11.2 0.0 1.4 1 0 0 1 1 1 0 Keratinocyte differentiation-associated NAD_binding_8 PF13450.6 gi|15920380|ref|NP_376049.1| - 0.004 17.3 0.0 0.0083 16.3 0.0 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Tox-MPTase3 PF15639.6 gi|15920380|ref|NP_376049.1| - 0.053 13.4 0.2 0.088 12.7 0.2 1.3 1 0 0 1 1 1 0 Metallopeptidase toxin 3 TPP_enzyme_M PF00205.22 gi|15920382|ref|NP_376051.1| - 5.6e-36 123.3 0.0 9.7e-36 122.5 0.0 1.4 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain TPP_enzyme_N PF02776.18 gi|15920382|ref|NP_376051.1| - 5.1e-23 81.5 0.0 8e-23 80.9 0.0 1.2 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain PNTB PF02233.16 gi|15920382|ref|NP_376051.1| - 0.00023 20.2 0.0 0.00051 19.1 0.0 1.5 2 0 0 2 2 2 1 NAD(P) transhydrogenase beta subunit DUF2204 PF09970.9 gi|15920383|ref|NP_376052.1| - 1.1e-54 184.8 4.9 1.4e-54 184.5 4.9 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase of unknown function (DUF2204) Ribosomal_L40e PF01020.17 gi|15920384|ref|NP_376053.1| - 5.6e-09 35.8 5.1 6.4e-09 35.6 5.1 1.1 1 0 0 1 1 1 1 Ribosomal L40e family DUF35_N PF12172.8 gi|15920384|ref|NP_376053.1| - 0.0004 20.2 0.5 0.00053 19.8 0.5 1.2 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) HypA PF01155.19 gi|15920384|ref|NP_376053.1| - 0.0082 16.2 0.4 0.009 16.0 0.4 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc_ribbon_2 PF13240.6 gi|15920384|ref|NP_376053.1| - 0.012 15.3 0.8 0.019 14.7 0.8 1.4 1 0 0 1 1 1 0 zinc-ribbon domain zf-RanBP PF00641.18 gi|15920384|ref|NP_376053.1| - 0.036 13.4 3.5 0.049 13.0 3.5 1.2 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others zf-ribbon_3 PF13248.6 gi|15920384|ref|NP_376053.1| - 0.085 12.3 1.3 0.12 11.8 1.3 1.3 1 0 0 1 1 1 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|15920384|ref|NP_376053.1| - 0.12 12.6 2.7 1.9 8.7 3.1 2.1 1 1 1 2 2 2 0 Zinc ribbon domain Rubredoxin_2 PF18073.1 gi|15920384|ref|NP_376053.1| - 0.34 10.7 3.5 0.53 10.0 3.5 1.3 1 1 0 1 1 1 0 Rubredoxin metal binding domain zf-RRN7 PF11781.8 gi|15920384|ref|NP_376053.1| - 1.5 8.6 5.2 20 5.0 2.0 2.1 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 KH_5 PF13184.6 gi|15920385|ref|NP_376054.1| - 5.6e-05 23.1 0.1 0.00011 22.2 0.1 1.4 1 0 0 1 1 1 1 NusA-like KH domain tRNA-synt_2 PF00152.20 gi|15920386|ref|NP_376055.1| - 1.3e-93 313.6 0.2 1.5e-93 313.3 0.2 1.0 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 gi|15920386|ref|NP_376055.1| - 6.6e-13 48.4 0.2 1.4e-12 47.4 0.2 1.6 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 gi|15920386|ref|NP_376055.1| - 0.0092 15.5 0.1 2.3 7.6 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) RBD PF02196.15 gi|15920386|ref|NP_376055.1| - 0.1 12.7 0.0 0.54 10.4 0.0 2.1 2 0 0 2 2 2 0 Raf-like Ras-binding domain PUB PF09409.10 gi|15920386|ref|NP_376055.1| - 0.21 11.5 0.8 0.77 9.7 0.8 2.0 1 1 0 1 1 1 0 PUB domain TruD PF01142.18 gi|15920388|ref|NP_376057.1| - 2e-63 214.7 0.9 1e-54 186.0 0.3 2.0 1 1 1 2 2 2 2 tRNA pseudouridine synthase D (TruD) PgaPase_1 PF06162.12 gi|15920388|ref|NP_376057.1| - 0.0053 16.5 0.5 0.01 15.6 0.0 1.6 2 0 0 2 2 2 1 Putative pyroglutamyl peptidase PgaPase_1 DUF4652 PF15525.6 gi|15920388|ref|NP_376057.1| - 0.018 14.9 1.7 0.089 12.6 1.7 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4652) PTH2 PF01981.16 gi|15920389|ref|NP_376058.1| - 1.9e-45 153.9 0.0 2.1e-45 153.8 0.0 1.0 1 0 0 1 1 1 1 Peptidyl-tRNA hydrolase PTH2 DUF3211 PF11485.8 gi|15920389|ref|NP_376058.1| - 0.12 12.6 0.0 0.17 12.1 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3211) DUF1610 PF07754.11 gi|15920390|ref|NP_376059.1| - 7.5e-17 61.0 9.3 3.9e-14 52.3 4.9 2.2 2 0 0 2 2 2 2 Domain of unknown function (DUF1610) DZR PF12773.7 gi|15920390|ref|NP_376059.1| - 4.6e-05 23.4 10.1 0.017 15.1 1.1 2.1 1 1 1 2 2 2 2 Double zinc ribbon zf-UDP PF14569.6 gi|15920390|ref|NP_376059.1| - 0.00028 21.0 5.7 0.00032 20.7 5.7 1.0 1 0 0 1 1 1 1 Zinc-binding RING-finger zf-ribbon_3 PF13248.6 gi|15920390|ref|NP_376059.1| - 0.00036 19.8 17.3 0.51 9.8 5.3 3.9 3 1 0 3 3 3 3 zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|15920390|ref|NP_376059.1| - 0.00077 19.3 8.1 0.0037 17.2 1.4 2.2 1 1 1 2 2 2 1 Putative transposase DNA-binding domain C1_1 PF00130.22 gi|15920390|ref|NP_376059.1| - 0.0024 17.7 7.8 0.009 15.9 1.3 2.1 1 1 1 2 2 2 1 Phorbol esters/diacylglycerol binding domain (C1 domain) zf-NADH-PPase PF09297.11 gi|15920390|ref|NP_376059.1| - 0.0036 16.9 0.3 0.0036 16.9 0.3 2.5 3 0 0 3 3 2 1 NADH pyrophosphatase zinc ribbon domain zf_C2H2_10 PF18414.1 gi|15920390|ref|NP_376059.1| - 0.0058 16.1 4.4 0.73 9.4 0.7 2.6 2 0 0 2 2 2 2 C2H2 type zinc-finger zinc_ribbon_2 PF13240.6 gi|15920390|ref|NP_376059.1| - 0.007 16.1 20.5 0.24 11.2 6.2 4.0 3 1 0 3 3 3 2 zinc-ribbon domain zf-ACC PF17848.1 gi|15920390|ref|NP_376059.1| - 0.0076 16.3 10.0 0.84 9.8 0.6 3.4 3 0 0 3 3 3 1 Acetyl-coA carboxylase zinc finger domain TF_Zn_Ribbon PF08271.12 gi|15920390|ref|NP_376059.1| - 0.0088 15.5 11.4 8.4 6.0 0.5 3.3 2 1 0 2 2 2 0 TFIIB zinc-binding zf-MYND PF01753.18 gi|15920390|ref|NP_376059.1| - 0.012 15.7 1.9 0.012 15.7 1.9 2.0 1 1 1 2 2 2 0 MYND finger C1_2 PF03107.16 gi|15920390|ref|NP_376059.1| - 0.015 15.6 12.1 0.51 10.7 2.0 2.1 1 1 1 2 2 2 0 C1 domain zinc_ribbon_15 PF17032.5 gi|15920390|ref|NP_376059.1| - 0.02 15.6 7.6 0.05 14.4 0.3 2.2 2 0 0 2 2 2 0 zinc-ribbon family zinc_ribbon_4 PF13717.6 gi|15920390|ref|NP_376059.1| - 0.022 14.7 9.5 0.83 9.6 0.0 3.4 3 1 0 3 3 3 0 zinc-ribbon domain PolC_DP2 PF03833.13 gi|15920390|ref|NP_376059.1| - 0.034 12.0 2.4 0.037 11.9 2.4 1.0 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 DUF1272 PF06906.11 gi|15920390|ref|NP_376059.1| - 0.043 13.9 8.9 12 6.1 8.9 2.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1272) Dynactin_p62 PF05502.13 gi|15920390|ref|NP_376059.1| - 0.044 12.6 6.8 0.049 12.4 6.8 1.1 1 0 0 1 1 1 0 Dynactin p62 family HypA PF01155.19 gi|15920390|ref|NP_376059.1| - 0.046 13.7 8.5 0.051 13.6 0.4 2.0 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ADK_lid PF05191.14 gi|15920390|ref|NP_376059.1| - 0.047 13.7 7.3 0.57 10.2 3.0 2.7 2 1 0 2 2 2 0 Adenylate kinase, active site lid zf_UBZ PF18439.1 gi|15920390|ref|NP_376059.1| - 0.053 13.1 13.9 1.3 8.7 0.6 3.7 2 1 2 4 4 4 0 Ubiquitin-Binding Zinc Finger DUF2321 PF10083.9 gi|15920390|ref|NP_376059.1| - 0.06 13.0 7.3 0.11 12.1 6.0 2.0 1 1 1 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2321) Auto_anti-p27 PF06677.12 gi|15920390|ref|NP_376059.1| - 0.064 13.4 2.1 0.064 13.4 2.1 2.5 2 1 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-CHY PF05495.12 gi|15920390|ref|NP_376059.1| - 0.071 13.6 9.8 1.7 9.2 0.4 2.0 1 1 1 2 2 2 0 CHY zinc finger Anti-TRAP PF15777.5 gi|15920390|ref|NP_376059.1| - 0.081 12.9 5.0 0.51 10.3 0.4 2.2 2 0 0 2 2 2 0 Tryptophan RNA-binding attenuator protein inhibitory protein HscB_4_cys PF18256.1 gi|15920390|ref|NP_376059.1| - 0.11 12.4 1.8 0.11 12.4 1.8 2.6 3 0 0 3 3 2 0 Co-chaperone HscB tetracysteine metal binding motif zf-LITAF-like PF10601.9 gi|15920390|ref|NP_376059.1| - 0.12 12.6 12.2 0.33 11.3 0.2 3.6 1 1 2 3 3 3 0 LITAF-like zinc ribbon domain zf-C2HC5 PF06221.13 gi|15920390|ref|NP_376059.1| - 0.15 12.1 11.7 0.2 11.7 4.6 2.5 1 1 1 2 2 2 0 Putative zinc finger motif, C2HC5-type zf-RING_9 PF13901.6 gi|15920390|ref|NP_376059.1| - 0.18 11.8 6.3 0.21 11.6 6.3 1.1 1 0 0 1 1 1 0 Putative zinc-RING and/or ribbon zf-HIT PF04438.16 gi|15920390|ref|NP_376059.1| - 0.19 11.7 14.3 0.83 9.6 6.3 3.1 3 0 0 3 3 3 0 HIT zinc finger tRNA-synt_1f PF01921.18 gi|15920390|ref|NP_376059.1| - 0.19 10.6 2.5 0.22 10.4 2.5 1.3 1 1 0 1 1 1 0 tRNA synthetases class I (K) zf-Mss51 PF13824.6 gi|15920390|ref|NP_376059.1| - 0.24 11.6 12.2 2.9 8.1 2.2 2.6 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 zinc_ribbon_10 PF10058.9 gi|15920390|ref|NP_376059.1| - 0.24 11.2 16.3 0.64 9.8 3.0 3.7 2 2 1 3 3 3 0 Predicted integral membrane zinc-ribbon metal-binding protein DUF35_N PF12172.8 gi|15920390|ref|NP_376059.1| - 0.27 11.2 0.1 0.27 11.2 0.1 3.5 2 1 1 3 3 3 0 Rubredoxin-like zinc ribbon domain (DUF35_N) IBR PF01485.21 gi|15920390|ref|NP_376059.1| - 0.29 11.4 11.1 0.8 10.0 6.7 2.1 1 1 1 2 2 2 0 IBR domain, a half RING-finger domain NOB1_Zn_bind PF08772.11 gi|15920390|ref|NP_376059.1| - 0.33 11.2 10.2 0.31 11.2 4.1 2.3 1 1 1 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like Nudix_N_2 PF14803.6 gi|15920390|ref|NP_376059.1| - 0.37 10.8 11.5 15 5.6 0.0 3.4 2 1 0 2 2 2 0 Nudix N-terminal Acetone_carb_G PF08882.11 gi|15920390|ref|NP_376059.1| - 0.47 10.6 7.3 1.3 9.2 1.0 2.5 1 1 1 2 2 2 0 Acetone carboxylase gamma subunit Rpr2 PF04032.16 gi|15920390|ref|NP_376059.1| - 0.48 10.7 8.2 24 5.3 8.2 2.9 1 1 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain PhnA_Zn_Ribbon PF08274.12 gi|15920390|ref|NP_376059.1| - 0.62 10.1 6.3 17 5.5 0.1 3.1 3 0 0 3 3 3 0 PhnA Zinc-Ribbon CpXC PF14353.6 gi|15920390|ref|NP_376059.1| - 0.91 9.6 9.8 3.1 7.8 0.7 3.1 1 1 2 3 3 3 0 CpXC protein DUF2752 PF10825.8 gi|15920390|ref|NP_376059.1| - 1 9.4 5.9 5.9 7.0 0.1 2.6 3 0 0 3 3 2 0 Protein of unknown function (DUF2752) RNA_POL_M_15KD PF02150.16 gi|15920390|ref|NP_376059.1| - 1.3 9.0 9.3 0.55 10.1 0.4 2.9 1 1 1 2 2 2 0 RNA polymerases M/15 Kd subunit Prok-RING_1 PF14446.6 gi|15920390|ref|NP_376059.1| - 2.1 8.3 11.6 31 4.6 11.6 2.3 1 1 0 1 1 1 0 Prokaryotic RING finger family 1 Zn-ribbon_8 PF09723.10 gi|15920390|ref|NP_376059.1| - 2.6 8.2 15.8 1.2 9.3 4.3 3.0 1 1 2 3 3 3 0 Zinc ribbon domain zf-C4_Topoisom PF01396.19 gi|15920390|ref|NP_376059.1| - 3.1 7.7 15.1 13 5.6 1.7 3.6 1 1 3 4 4 4 0 Topoisomerase DNA binding C4 zinc finger Lar_restr_allev PF14354.6 gi|15920390|ref|NP_376059.1| - 3.7 8.0 9.5 19 5.7 4.6 2.3 2 1 0 2 2 2 0 Restriction alleviation protein Lar PHD PF00628.29 gi|15920390|ref|NP_376059.1| - 5 7.1 11.7 17 5.4 11.7 2.4 1 1 0 1 1 1 0 PHD-finger YhfH PF14149.6 gi|15920390|ref|NP_376059.1| - 5 7.2 15.4 4.8 7.3 0.2 3.4 1 1 1 2 2 1 0 YhfH-like protein DUF1258 PF06869.12 gi|15920390|ref|NP_376059.1| - 5.4 6.4 5.4 3.6 7.0 2.2 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1258) DpnI PF06044.12 gi|15920390|ref|NP_376059.1| - 5.6 6.6 6.1 2 8.0 3.9 1.3 1 1 0 1 1 1 0 Dam-replacing family zf-B_box PF00643.24 gi|15920390|ref|NP_376059.1| - 5.9 7.1 13.0 5.2e+02 0.9 13.0 2.8 1 1 0 1 1 1 0 B-box zinc finger DUF2072 PF09845.9 gi|15920390|ref|NP_376059.1| - 7.2 6.9 9.8 3.2 8.0 4.3 2.0 1 1 1 2 2 2 0 Zn-ribbon containing protein Ribosomal_L32p PF01783.23 gi|15920390|ref|NP_376059.1| - 8.3 6.8 11.0 87 3.5 5.5 3.1 1 1 0 2 2 2 0 Ribosomal L32p protein family zinc_ribbon_9 PF14369.6 gi|15920390|ref|NP_376059.1| - 9 6.6 16.9 8.6 6.7 2.6 3.6 2 2 1 3 3 3 0 zinc-ribbon EF1_GNE PF00736.19 gi|15920391|ref|NP_376060.1| - 1e-17 64.1 0.1 1.1e-17 63.9 0.1 1.0 1 0 0 1 1 1 1 EF-1 guanine nucleotide exchange domain AAA PF00004.29 gi|15920392|ref|NP_376061.1| - 6.7e-100 330.7 0.0 5.5e-49 166.0 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|15920392|ref|NP_376061.1| - 7.1e-35 118.6 4.3 4.3e-17 61.6 0.0 3.1 3 0 0 3 3 2 2 AAA+ lid domain RuvB_N PF05496.12 gi|15920392|ref|NP_376061.1| - 4.7e-17 62.2 0.0 3.2e-08 33.5 0.0 2.8 2 1 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain CDC48_2 PF02933.17 gi|15920392|ref|NP_376061.1| - 7.2e-17 60.9 1.0 1.5e-16 59.9 1.0 1.6 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), domain 2 AAA_16 PF13191.6 gi|15920392|ref|NP_376061.1| - 1.9e-15 57.7 0.1 1e-05 26.0 0.0 4.8 3 2 1 4 4 3 2 AAA ATPase domain AAA_2 PF07724.14 gi|15920392|ref|NP_376061.1| - 8.7e-15 55.2 0.2 8e-07 29.3 0.0 2.9 3 0 0 3 3 2 2 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 gi|15920392|ref|NP_376061.1| - 3.3e-12 46.8 1.5 0.0044 17.3 0.0 4.8 3 2 1 5 5 4 2 AAA domain AAA_5 PF07728.14 gi|15920392|ref|NP_376061.1| - 2.1e-11 44.0 1.6 0.0004 20.4 0.1 4.1 3 2 0 3 3 2 2 AAA domain (dynein-related subfamily) AAA_33 PF13671.6 gi|15920392|ref|NP_376061.1| - 4.7e-11 43.0 0.0 0.00045 20.4 0.0 2.7 2 0 0 2 2 2 2 AAA domain TIP49 PF06068.13 gi|15920392|ref|NP_376061.1| - 1.8e-10 40.5 0.0 0.00011 21.6 0.0 2.6 2 0 0 2 2 2 2 TIP49 P-loop domain AAA_14 PF13173.6 gi|15920392|ref|NP_376061.1| - 4.3e-10 39.7 0.0 0.0015 18.6 0.0 2.9 3 0 0 3 3 2 2 AAA domain AAA_18 PF13238.6 gi|15920392|ref|NP_376061.1| - 7.3e-09 36.3 0.1 0.0062 17.1 0.0 3.5 3 0 0 3 3 3 2 AAA domain IstB_IS21 PF01695.17 gi|15920392|ref|NP_376061.1| - 1e-08 35.1 0.0 0.0058 16.4 0.0 3.0 3 0 0 3 3 3 2 IstB-like ATP binding protein Mg_chelatase PF01078.21 gi|15920392|ref|NP_376061.1| - 1.6e-07 30.9 0.3 0.0063 15.9 0.1 2.6 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI CDC48_N PF02359.18 gi|15920392|ref|NP_376061.1| - 1.8e-07 31.2 0.2 1.3e-06 28.5 0.1 2.4 2 0 0 2 2 2 1 Cell division protein 48 (CDC48), N-terminal domain AAA_24 PF13479.6 gi|15920392|ref|NP_376061.1| - 2.2e-07 30.8 0.0 0.023 14.4 0.0 2.9 2 1 0 2 2 2 2 AAA domain Vps4_C PF09336.10 gi|15920392|ref|NP_376061.1| - 4.4e-07 29.8 1.0 0.0057 16.6 0.1 3.5 3 0 0 3 3 3 2 Vps4 C terminal oligomerisation domain RNA_helicase PF00910.22 gi|15920392|ref|NP_376061.1| - 7e-07 29.6 0.0 0.02 15.3 0.0 2.7 2 0 0 2 2 2 2 RNA helicase AAA_28 PF13521.6 gi|15920392|ref|NP_376061.1| - 7.9e-07 29.5 0.0 0.032 14.5 0.0 3.1 3 0 0 3 3 2 2 AAA domain Sigma54_activat PF00158.26 gi|15920392|ref|NP_376061.1| - 1.9e-06 27.7 0.2 0.3 10.8 0.0 4.1 3 2 0 3 3 2 2 Sigma-54 interaction domain ATPase_2 PF01637.18 gi|15920392|ref|NP_376061.1| - 3.3e-06 27.2 0.8 0.029 14.3 0.1 4.1 2 2 1 3 3 3 1 ATPase domain predominantly from Archaea DUF815 PF05673.13 gi|15920392|ref|NP_376061.1| - 5.5e-06 25.7 0.0 0.16 11.1 0.0 3.7 2 1 0 3 3 3 2 Protein of unknown function (DUF815) AAA_3 PF07726.11 gi|15920392|ref|NP_376061.1| - 8.4e-06 25.7 0.0 0.13 12.2 0.0 2.8 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) TsaE PF02367.17 gi|15920392|ref|NP_376061.1| - 1.4e-05 25.1 0.0 0.23 11.5 0.0 2.5 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_17 PF13207.6 gi|15920392|ref|NP_376061.1| - 1.6e-05 25.4 0.1 1.2 9.6 0.0 3.7 3 0 0 3 3 3 1 AAA domain ABC_tran PF00005.27 gi|15920392|ref|NP_376061.1| - 1.7e-05 25.4 0.0 0.25 11.9 0.0 2.5 2 0 0 2 2 2 2 ABC transporter Zeta_toxin PF06414.12 gi|15920392|ref|NP_376061.1| - 3.7e-05 23.1 0.1 0.11 11.7 0.0 2.7 2 0 0 2 2 2 2 Zeta toxin NACHT PF05729.12 gi|15920392|ref|NP_376061.1| - 5.5e-05 23.2 0.9 0.56 10.1 0.1 3.3 3 1 1 4 4 3 2 NACHT domain AAA_7 PF12775.7 gi|15920392|ref|NP_376061.1| - 6.4e-05 22.5 0.1 0.45 10.0 0.0 2.7 2 1 0 2 2 2 2 P-loop containing dynein motor region AAA_25 PF13481.6 gi|15920392|ref|NP_376061.1| - 9.6e-05 22.0 5.8 0.065 12.8 0.3 3.7 2 2 0 3 3 3 2 AAA domain ATPase PF06745.13 gi|15920392|ref|NP_376061.1| - 0.00012 21.6 0.5 1 8.6 0.0 3.9 4 0 0 4 4 4 1 KaiC Bac_DnaA PF00308.18 gi|15920392|ref|NP_376061.1| - 0.00027 20.9 0.0 0.065 13.1 0.0 3.0 3 1 0 3 3 2 1 Bacterial dnaA protein NB-ARC PF00931.22 gi|15920392|ref|NP_376061.1| - 0.00033 19.9 0.0 0.24 10.5 0.0 3.0 3 0 0 3 3 3 1 NB-ARC domain Parvo_NS1 PF01057.17 gi|15920392|ref|NP_376061.1| - 0.00071 18.7 0.1 0.94 8.5 0.0 2.3 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 PhoH PF02562.16 gi|15920392|ref|NP_376061.1| - 0.0011 18.4 0.2 0.35 10.3 0.1 2.5 2 0 0 2 2 2 1 PhoH-like protein Guanylate_kin PF00625.21 gi|15920392|ref|NP_376061.1| - 0.0019 17.9 0.2 13 5.4 0.0 4.1 2 2 2 4 4 4 0 Guanylate kinase AFG1_ATPase PF03969.16 gi|15920392|ref|NP_376061.1| - 0.0026 16.7 0.0 1.5 7.7 0.0 2.5 2 0 0 2 2 2 1 AFG1-like ATPase AAA_30 PF13604.6 gi|15920392|ref|NP_376061.1| - 0.0041 16.9 0.1 2 8.1 0.1 2.7 2 0 0 2 2 2 1 AAA domain UFD1 PF03152.14 gi|15920392|ref|NP_376061.1| - 0.0044 16.5 0.0 0.0084 15.6 0.0 1.4 1 0 0 1 1 1 1 Ubiquitin fusion degradation protein UFD1 AAA_19 PF13245.6 gi|15920392|ref|NP_376061.1| - 0.0077 16.6 3.0 2.5 8.4 0.3 3.1 2 2 1 3 3 3 1 AAA domain TniB PF05621.11 gi|15920392|ref|NP_376061.1| - 0.0097 15.3 0.0 5.7 6.3 0.0 3.1 4 0 0 4 4 2 0 Bacterial TniB protein Viral_helicase1 PF01443.18 gi|15920392|ref|NP_376061.1| - 0.014 15.1 0.0 0.75 9.5 0.0 2.2 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase PduV-EutP PF10662.9 gi|15920392|ref|NP_376061.1| - 0.017 14.8 0.0 9.2 6.0 0.0 2.6 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation Rad17 PF03215.15 gi|15920392|ref|NP_376061.1| - 0.02 14.8 0.0 8.7 6.2 0.0 2.9 2 1 1 3 3 3 0 Rad17 P-loop domain Sigma54_activ_2 PF14532.6 gi|15920392|ref|NP_376061.1| - 0.021 15.0 0.0 8.5 6.5 0.0 2.6 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_11 PF13086.6 gi|15920392|ref|NP_376061.1| - 0.024 14.4 0.1 3 7.5 0.0 2.5 3 0 0 3 3 2 0 AAA domain NTPase_1 PF03266.15 gi|15920392|ref|NP_376061.1| - 0.03 14.2 5.1 3.5 7.5 0.0 4.1 4 1 1 5 5 3 0 NTPase IPT PF01745.16 gi|15920392|ref|NP_376061.1| - 0.03 13.7 0.3 1.3 8.4 0.1 2.4 2 0 0 2 2 2 0 Isopentenyl transferase DUF2075 PF09848.9 gi|15920392|ref|NP_376061.1| - 0.033 13.4 0.0 6.3 5.9 0.0 2.4 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) ATP-synt_ab PF00006.25 gi|15920392|ref|NP_376061.1| - 0.035 13.8 0.0 2 8.0 0.0 2.5 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_29 PF13555.6 gi|15920392|ref|NP_376061.1| - 0.064 13.0 0.0 11 5.8 0.0 2.4 2 0 0 2 2 2 0 P-loop containing region of AAA domain Roc PF08477.13 gi|15920392|ref|NP_376061.1| - 0.092 13.0 0.0 12 6.2 0.0 2.6 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase Cytidylate_kin PF02224.18 gi|15920392|ref|NP_376061.1| - 0.11 12.3 0.3 5.7 6.6 0.0 2.8 3 0 0 3 3 2 0 Cytidylate kinase MCM PF00493.23 gi|15920392|ref|NP_376061.1| - 0.14 11.3 0.0 23 4.0 0.0 2.8 3 0 0 3 3 3 0 MCM P-loop domain pRN1_helical PF13010.6 gi|15920392|ref|NP_376061.1| - 0.15 12.0 1.9 0.23 11.4 0.8 1.9 2 0 0 2 2 1 0 Primase helical domain MMR_HSR1 PF01926.23 gi|15920392|ref|NP_376061.1| - 0.15 12.1 0.0 18 5.5 0.0 3.4 4 0 0 4 4 2 0 50S ribosome-binding GTPase DUF1103 PF06513.11 gi|15920392|ref|NP_376061.1| - 0.19 11.3 3.2 1.8 8.1 0.4 2.7 2 1 0 2 2 2 0 Repeat of unknown function (DUF1103) ADSL_C PF10397.9 gi|15920392|ref|NP_376061.1| - 0.87 10.2 3.1 7.4 7.2 0.0 3.1 4 0 0 4 4 2 0 Adenylosuccinate lyase C-terminus XPG_I PF00867.18 gi|15920393|ref|NP_376062.1| - 6.1e-27 93.8 0.1 4.1e-26 91.2 0.0 2.2 2 0 0 2 2 2 1 XPG I-region XPG_N PF00752.17 gi|15920393|ref|NP_376062.1| - 9.1e-11 42.1 0.0 2.3e-10 40.8 0.0 1.7 1 0 0 1 1 1 1 XPG N-terminal domain 5_3_exonuc PF01367.20 gi|15920393|ref|NP_376062.1| - 2.6e-05 24.7 0.2 2.6e-05 24.7 0.2 2.4 2 1 0 2 2 2 1 5'-3' exonuclease, C-terminal SAM fold Sigma70_r1_1 PF03979.14 gi|15920393|ref|NP_376062.1| - 0.029 14.4 1.4 0.072 13.2 0.9 1.9 1 1 1 2 2 2 0 Sigma-70 factor, region 1.1 DUF2161 PF09929.9 gi|15920393|ref|NP_376062.1| - 0.041 14.0 1.4 0.095 12.8 0.2 2.1 3 0 0 3 3 3 0 Putative PD-(D/E)XK phosphodiesterase (DUF2161) DUF3231 PF11553.8 gi|15920393|ref|NP_376062.1| - 0.042 13.5 0.0 0.092 12.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3231) Nitro_FeMo-Co PF02579.17 gi|15920393|ref|NP_376062.1| - 0.077 13.3 0.4 0.17 12.2 0.4 1.6 1 0 0 1 1 1 0 Dinitrogenase iron-molybdenum cofactor NAD_binding_7 PF13241.6 gi|15920394|ref|NP_376063.1| - 2.3e-23 82.6 0.1 5.4e-23 81.4 0.0 1.6 2 0 0 2 2 2 1 Putative NAD(P)-binding Shikimate_DH PF01488.20 gi|15920394|ref|NP_376063.1| - 8.3e-06 25.9 0.0 1.6e-05 25.0 0.0 1.4 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase TrkA_N PF02254.18 gi|15920394|ref|NP_376063.1| - 9.8e-06 25.8 0.2 4.3e-05 23.7 0.1 1.9 1 1 1 2 2 2 1 TrkA-N domain AlaDh_PNT_C PF01262.21 gi|15920394|ref|NP_376063.1| - 0.0002 20.7 0.0 0.00036 19.9 0.0 1.4 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox PF00070.27 gi|15920394|ref|NP_376063.1| - 0.00042 20.8 0.3 0.0025 18.3 0.3 2.3 2 1 1 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|15920394|ref|NP_376063.1| - 0.0023 17.2 0.1 0.0037 16.5 0.0 1.5 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Spermine_synth PF01564.17 gi|15920394|ref|NP_376063.1| - 0.022 14.2 1.4 0.27 10.6 0.5 2.4 1 1 1 2 2 2 0 Spermine/spermidine synthase domain 3HCDH_N PF02737.18 gi|15920394|ref|NP_376063.1| - 0.023 14.6 0.1 0.059 13.2 0.0 1.7 1 1 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox_2 PF07992.14 gi|15920394|ref|NP_376063.1| - 0.024 13.9 0.1 0.041 13.1 0.2 1.3 1 1 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_2 PF03446.15 gi|15920394|ref|NP_376063.1| - 0.054 13.7 0.0 0.083 13.1 0.0 1.3 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase MOR2-PAG1_C PF14225.6 gi|15920394|ref|NP_376063.1| - 0.097 12.5 0.2 0.14 12.0 0.1 1.3 1 1 0 1 1 1 0 Cell morphogenesis C-terminal FAD_binding_2 PF00890.24 gi|15920394|ref|NP_376063.1| - 0.21 10.6 0.0 0.29 10.2 0.0 1.1 1 0 0 1 1 1 0 FAD binding domain GlutR_N PF05201.15 gi|15920395|ref|NP_376064.1| - 2.4e-32 111.7 0.5 6.2e-32 110.4 0.1 1.9 2 0 0 2 2 2 1 Glutamyl-tRNAGlu reductase, N-terminal domain Shikimate_DH PF01488.20 gi|15920395|ref|NP_376064.1| - 9.8e-16 58.1 0.4 7.4e-15 55.2 0.3 2.4 1 1 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase GlutR_dimer PF00745.20 gi|15920395|ref|NP_376064.1| - 6e-11 42.7 7.1 7.4e-11 42.3 4.6 2.2 2 0 0 2 2 2 1 Glutamyl-tRNAGlu reductase, dimerisation domain F420_oxidored PF03807.17 gi|15920395|ref|NP_376064.1| - 7.4e-09 36.1 0.0 4.1e-08 33.7 0.0 2.3 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent NAD_binding_2 PF03446.15 gi|15920395|ref|NP_376064.1| - 1.7e-05 25.1 0.1 7.4e-05 23.0 0.0 2.1 2 0 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase 2-Hacid_dh_C PF02826.19 gi|15920395|ref|NP_376064.1| - 6.2e-05 22.4 0.1 0.00013 21.4 0.1 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 gi|15920395|ref|NP_376064.1| - 0.00017 21.2 0.0 0.00043 19.9 0.0 1.7 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain Ldh_1_N PF00056.23 gi|15920395|ref|NP_376064.1| - 0.0015 18.6 0.0 0.0034 17.5 0.0 1.7 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain GFO_IDH_MocA PF01408.22 gi|15920395|ref|NP_376064.1| - 0.0017 19.2 0.0 0.0092 16.8 0.0 2.1 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold ApbA PF02558.16 gi|15920395|ref|NP_376064.1| - 0.0022 17.6 0.0 0.0058 16.3 0.0 1.8 1 0 0 1 1 1 1 Ketopantoate reductase PanE/ApbA Sacchrp_dh_NADP PF03435.18 gi|15920395|ref|NP_376064.1| - 0.0024 18.1 0.0 0.0058 16.9 0.0 1.7 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain ThiF PF00899.21 gi|15920395|ref|NP_376064.1| - 0.0027 17.1 0.4 0.0074 15.7 0.1 1.8 2 0 0 2 2 2 1 ThiF family Pyr_redox_2 PF07992.14 gi|15920395|ref|NP_376064.1| - 0.0057 15.9 0.0 0.011 15.0 0.0 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase NAD_Gly3P_dh_N PF01210.23 gi|15920395|ref|NP_376064.1| - 0.0098 15.9 2.0 0.049 13.6 0.1 2.8 3 1 1 4 4 4 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus HMMR_C PF15908.5 gi|15920395|ref|NP_376064.1| - 0.012 15.9 1.9 0.029 14.6 1.9 1.8 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor C-terminal NAD_binding_7 PF13241.6 gi|15920395|ref|NP_376064.1| - 0.012 16.0 0.2 0.24 11.8 0.0 2.4 2 0 0 2 2 2 0 Putative NAD(P)-binding TrkA_N PF02254.18 gi|15920395|ref|NP_376064.1| - 0.014 15.7 1.3 0.036 14.3 0.0 2.3 2 1 0 2 2 2 0 TrkA-N domain DapB_N PF01113.20 gi|15920395|ref|NP_376064.1| - 0.015 15.4 0.0 0.036 14.2 0.0 1.6 1 0 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus Pyr_redox PF00070.27 gi|15920395|ref|NP_376064.1| - 0.019 15.5 0.1 0.078 13.6 0.1 2.1 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|15920395|ref|NP_376064.1| - 0.097 11.9 0.1 0.27 10.4 0.0 1.7 2 0 0 2 2 2 0 FAD binding domain 3HCDH_N PF02737.18 gi|15920395|ref|NP_376064.1| - 0.1 12.5 2.6 0.22 11.4 0.0 2.5 3 0 0 3 3 3 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain PglD_N PF17836.1 gi|15920395|ref|NP_376064.1| - 0.23 12.1 4.0 0.23 12.1 0.3 2.8 3 0 0 3 3 2 0 PglD N-terminal domain Radical_SAM PF04055.21 gi|15920395|ref|NP_376064.1| - 0.24 11.8 1.5 1.2 9.4 0.6 2.5 2 1 0 2 2 2 0 Radical SAM superfamily ALAD PF00490.21 gi|15920396|ref|NP_376065.1| - 9.5e-140 465.2 0.0 1.1e-139 465.1 0.0 1.0 1 0 0 1 1 1 1 Delta-aminolevulinic acid dehydratase Mob_Pre PF01076.19 gi|15920396|ref|NP_376065.1| - 0.11 12.3 0.0 0.17 11.7 0.0 1.2 1 0 0 1 1 1 0 Plasmid recombination enzyme Aminotran_3 PF00202.21 gi|15920397|ref|NP_376066.1| - 4.3e-49 167.3 0.2 4.6e-49 167.2 0.2 1.0 1 0 0 1 1 1 1 Aminotransferase class-III Aminotran_1_2 PF00155.21 gi|15920397|ref|NP_376066.1| - 4.3e-06 26.1 0.0 5.2e-06 25.9 0.0 1.1 1 0 0 1 1 1 1 Aminotransferase class I and II Erf4 PF10256.9 gi|15920397|ref|NP_376066.1| - 0.091 12.9 0.0 0.56 10.3 0.0 2.1 2 1 0 2 2 2 0 Golgin subfamily A member 7/ERF4 family Porphobil_deam PF01379.20 gi|15920398|ref|NP_376067.1| - 7.5e-60 201.9 0.0 9.8e-60 201.5 0.0 1.2 1 0 0 1 1 1 1 Porphobilinogen deaminase, dipyromethane cofactor binding domain Porphobil_deamC PF03900.15 gi|15920398|ref|NP_376067.1| - 1.5e-06 28.5 0.0 3e-06 27.5 0.0 1.6 1 0 0 1 1 1 1 Porphobilinogen deaminase, C-terminal domain DUF3536 PF12055.8 gi|15920398|ref|NP_376067.1| - 0.074 12.4 0.0 0.13 11.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3536) Phytochelatin PF05023.14 gi|15920398|ref|NP_376067.1| - 0.15 11.3 0.0 0.25 10.6 0.0 1.3 1 0 0 1 1 1 0 Phytochelatin synthase Peptidase_S49 PF01343.18 gi|15920398|ref|NP_376067.1| - 0.16 11.9 0.1 0.28 11.1 0.1 1.3 1 0 0 1 1 1 0 Peptidase family S49 HEM4 PF02602.15 gi|15920399|ref|NP_376068.1| - 6.5e-18 64.9 0.0 2e-17 63.3 0.0 1.7 1 1 0 1 1 1 1 Uroporphyrinogen-III synthase HemD TIR PF01582.20 gi|15920399|ref|NP_376068.1| - 0.048 13.5 0.3 0.076 12.8 0.3 1.3 1 0 0 1 1 1 0 TIR domain Phosphodiest PF01663.22 gi|15920401|ref|NP_376070.1| - 4.1e-11 43.1 0.1 5e-11 42.8 0.1 1.1 1 0 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase Metalloenzyme PF01676.18 gi|15920401|ref|NP_376070.1| - 0.081 12.3 0.0 2.8 7.2 0.0 2.5 2 0 0 2 2 2 0 Metalloenzyme superfamily SO_alpha_A3 PF17806.1 gi|15920402|ref|NP_376071.1| - 8.6e-07 29.2 0.0 2e-06 28.0 0.0 1.6 1 1 0 1 1 1 1 Sarcosine oxidase A3 domain Fer2_BFD PF04324.15 gi|15920402|ref|NP_376071.1| - 2.1e-06 28.0 0.9 3.9e-06 27.1 0.9 1.5 1 0 0 1 1 1 1 BFD-like [2Fe-2S] binding domain Pyr_redox_2 PF07992.14 gi|15920402|ref|NP_376071.1| - 7.3e-06 25.4 4.0 0.0002 20.7 4.0 2.2 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|15920402|ref|NP_376071.1| - 0.047 12.8 3.4 0.095 11.8 0.3 2.1 2 0 0 2 2 2 0 Glucose inhibited division protein A DAO PF01266.24 gi|15920403|ref|NP_376072.1| - 1.5e-43 149.7 0.0 1.7e-43 149.5 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 gi|15920403|ref|NP_376072.1| - 1.1e-08 34.8 0.1 7.9e-07 28.6 0.0 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|15920403|ref|NP_376072.1| - 6.6e-08 32.0 0.4 7.4e-05 22.0 0.0 2.2 2 0 0 2 2 2 2 Glucose inhibited division protein A NAD_binding_8 PF13450.6 gi|15920403|ref|NP_376072.1| - 3.7e-06 27.1 0.0 8.6e-06 25.9 0.0 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|15920403|ref|NP_376072.1| - 0.00017 21.0 0.1 0.0031 16.8 0.1 2.1 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|15920403|ref|NP_376072.1| - 0.00034 19.8 0.0 0.009 15.1 0.1 2.0 2 0 0 2 2 2 1 FAD binding domain Thi4 PF01946.17 gi|15920403|ref|NP_376072.1| - 0.0011 18.3 0.2 0.002 17.4 0.2 1.4 1 0 0 1 1 1 1 Thi4 family FAD_binding_3 PF01494.19 gi|15920403|ref|NP_376072.1| - 0.003 16.9 0.1 0.0042 16.4 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain Pyr_redox PF00070.27 gi|15920403|ref|NP_376072.1| - 0.006 17.1 0.1 0.017 15.7 0.0 1.9 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|15920403|ref|NP_376072.1| - 0.007 15.1 1.2 0.15 10.7 0.2 2.1 2 0 0 2 2 2 1 HI0933-like protein NAD_binding_9 PF13454.6 gi|15920403|ref|NP_376072.1| - 0.024 14.6 0.0 0.43 10.5 0.0 2.3 2 0 0 2 2 2 0 FAD-NAD(P)-binding Lycopene_cycl PF05834.12 gi|15920403|ref|NP_376072.1| - 0.036 13.1 0.0 0.05 12.7 0.0 1.2 1 0 0 1 1 1 0 Lycopene cyclase protein ApbA PF02558.16 gi|15920403|ref|NP_376072.1| - 0.045 13.4 0.0 0.075 12.7 0.0 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Shikimate_DH PF01488.20 gi|15920403|ref|NP_376072.1| - 0.067 13.2 0.0 0.13 12.3 0.0 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase TrkA_N PF02254.18 gi|15920403|ref|NP_376072.1| - 0.11 12.7 0.0 0.2 11.9 0.0 1.4 1 0 0 1 1 1 0 TrkA-N domain Lactamase_B_2 PF12706.7 gi|15920404|ref|NP_376073.1| - 0.0066 16.0 0.1 0.012 15.1 0.1 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain RMMBL PF07521.12 gi|15920404|ref|NP_376073.1| - 0.14 12.2 0.0 0.29 11.1 0.0 1.6 1 0 0 1 1 1 0 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B PF00753.27 gi|15920404|ref|NP_376073.1| - 1.1 9.2 4.2 2.9 7.9 2.4 2.5 2 1 0 2 2 2 0 Metallo-beta-lactamase superfamily DNA_ligase_A_M PF01068.21 gi|15920405|ref|NP_376074.1| - 1.1e-61 208.0 0.9 1.8e-61 207.4 0.9 1.3 1 0 0 1 1 1 1 ATP dependent DNA ligase domain DNA_ligase_A_N PF04675.14 gi|15920405|ref|NP_376074.1| - 5.5e-39 134.2 0.4 9.9e-39 133.4 0.4 1.4 1 0 0 1 1 1 1 DNA ligase N terminus DNA_ligase_A_C PF04679.15 gi|15920405|ref|NP_376074.1| - 1.1e-27 96.5 0.0 2.2e-27 95.5 0.0 1.5 1 0 0 1 1 1 1 ATP dependent DNA ligase C terminal region RNA_ligase PF09414.10 gi|15920405|ref|NP_376074.1| - 5.4e-06 26.8 0.6 8.4e-06 26.2 0.6 1.3 1 0 0 1 1 1 1 RNA ligase DNA_ligase_OB_2 PF14743.6 gi|15920405|ref|NP_376074.1| - 0.061 13.3 0.3 3.7 7.7 0.0 2.7 3 0 0 3 3 3 0 DNA ligase OB-like domain dUTPase PF00692.19 gi|15920406|ref|NP_376075.1| - 1.9e-25 89.0 0.0 2.5e-25 88.6 0.0 1.1 1 0 0 1 1 1 1 dUTPase DCD PF06559.11 gi|15920406|ref|NP_376075.1| - 7.1e-08 31.6 0.0 2.1e-07 30.1 0.0 1.8 1 1 0 1 1 1 1 2'-deoxycytidine 5'-triphosphate deaminase (DCD) STN1_2 PF09170.10 gi|15920407|ref|NP_376076.1| - 0.0038 17.5 0.9 0.0064 16.7 0.9 1.4 1 0 0 1 1 1 1 CST, Suppressor of cdc thirteen homolog, complex subunit STN1 Apolipoprotein PF01442.18 gi|15920407|ref|NP_376076.1| - 0.0069 16.3 0.1 0.048 13.5 0.0 2.2 2 1 1 3 3 3 1 Apolipoprotein A1/A4/E domain FlxA PF14282.6 gi|15920407|ref|NP_376076.1| - 0.012 15.6 1.1 0.027 14.4 1.1 1.7 1 0 0 1 1 1 0 FlxA-like protein HSBP1 PF06825.12 gi|15920407|ref|NP_376076.1| - 0.015 15.1 1.4 0.07 13.0 1.5 2.1 1 1 0 1 1 1 0 Heat shock factor binding protein 1 DUF1778 PF08681.11 gi|15920407|ref|NP_376076.1| - 0.024 14.6 0.1 0.17 11.8 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1778) Phage_GPO PF05929.11 gi|15920407|ref|NP_376076.1| - 0.027 14.1 0.4 0.049 13.2 0.4 1.4 1 0 0 1 1 1 0 Phage capsid scaffolding protein (GPO) serine peptidase Fib_alpha PF08702.10 gi|15920407|ref|NP_376076.1| - 0.035 14.3 0.4 0.035 14.3 0.4 1.7 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family SHE3 PF17078.5 gi|15920407|ref|NP_376076.1| - 0.05 13.3 2.7 0.16 11.7 2.6 2.0 1 1 0 1 1 1 0 SWI5-dependent HO expression protein 3 MDM31_MDM32 PF08118.11 gi|15920407|ref|NP_376076.1| - 0.054 12.2 0.4 0.071 11.8 0.4 1.1 1 0 0 1 1 1 0 Yeast mitochondrial distribution and morphology (MDM) proteins DUF2730 PF10805.8 gi|15920407|ref|NP_376076.1| - 0.055 13.6 0.1 0.14 12.3 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF2730) DUF4795 PF16043.5 gi|15920407|ref|NP_376076.1| - 0.056 13.0 5.5 0.92 9.1 5.0 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) BLOC1_2 PF10046.9 gi|15920407|ref|NP_376076.1| - 0.11 12.8 0.1 0.11 12.8 0.1 2.3 3 0 0 3 3 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 RHH_1 PF01402.21 gi|15920407|ref|NP_376076.1| - 0.23 11.4 0.1 0.23 11.4 0.1 2.9 3 0 0 3 3 3 0 Ribbon-helix-helix protein, copG family YabA PF06156.13 gi|15920407|ref|NP_376076.1| - 0.41 11.3 2.2 0.81 10.4 1.1 2.0 1 1 1 2 2 2 0 Initiation control protein YabA Lipoprotein_6 PF01441.19 gi|15920407|ref|NP_376076.1| - 0.42 10.6 4.0 2.8 7.9 0.6 2.6 1 1 2 3 3 3 0 Lipoprotein FapA PF03961.13 gi|15920407|ref|NP_376076.1| - 1.4 7.5 6.9 0.88 8.1 4.9 1.6 1 1 1 2 2 2 0 Flagellar Assembly Protein A DUF896 PF05979.12 gi|15920407|ref|NP_376076.1| - 2 8.4 8.1 1 9.2 0.6 3.1 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF896) DivIC PF04977.15 gi|15920407|ref|NP_376076.1| - 2.4 8.0 6.1 3.3 7.6 0.4 3.0 2 1 1 3 3 3 0 Septum formation initiator ZapB PF06005.12 gi|15920407|ref|NP_376076.1| - 3 8.4 9.0 2.8 8.5 3.6 3.1 2 1 0 2 2 2 0 Cell division protein ZapB Thioredoxin_3 PF13192.6 gi|15920408|ref|NP_376077.1| - 1.3e-27 95.7 1.4 3.2e-15 55.9 1.7 2.4 2 0 0 2 2 2 2 Thioredoxin domain Thioredoxin_2 PF13098.6 gi|15920408|ref|NP_376077.1| - 3.7e-05 24.1 2.6 0.016 15.6 0.0 3.2 2 1 0 2 2 2 1 Thioredoxin-like domain Glutaredoxin PF00462.24 gi|15920408|ref|NP_376077.1| - 6.4e-05 23.1 5.7 0.31 11.3 0.0 3.2 2 1 0 2 2 2 2 Glutaredoxin Thioredoxin PF00085.20 gi|15920408|ref|NP_376077.1| - 0.00017 21.6 2.2 0.011 15.7 0.4 2.4 2 1 0 2 2 2 1 Thioredoxin OST3_OST6 PF04756.13 gi|15920408|ref|NP_376077.1| - 0.002 17.6 0.0 0.014 14.8 0.0 1.9 2 0 0 2 2 2 1 OST3 / OST6 family, transporter family ABC_transp_aux PF09822.9 gi|15920408|ref|NP_376077.1| - 0.013 15.0 0.0 3.8 6.9 0.0 2.2 2 0 0 2 2 2 0 ABC-type uncharacterized transport system TrbC_Ftype PF09673.10 gi|15920408|ref|NP_376077.1| - 0.016 15.3 0.1 0.49 10.5 0.0 2.3 2 0 0 2 2 2 0 Type-F conjugative transfer system pilin assembly protein Thioredoxin_8 PF13905.6 gi|15920408|ref|NP_376077.1| - 0.017 15.4 0.2 14 6.1 0.0 3.4 2 1 0 2 2 2 0 Thioredoxin-like Thioredoxin_7 PF13899.6 gi|15920408|ref|NP_376077.1| - 0.018 15.2 0.4 0.07 13.3 0.1 2.0 2 0 0 2 2 2 0 Thioredoxin-like Thioredoxin_4 PF13462.6 gi|15920408|ref|NP_376077.1| - 3.6 7.7 9.0 1.7 8.7 0.2 3.5 2 2 2 4 4 4 0 Thioredoxin AMMECR1 PF01871.17 gi|15920409|ref|NP_376078.1| - 7.7e-48 162.2 0.0 9.2e-48 162.0 0.0 1.1 1 0 0 1 1 1 1 AMMECR1 Mut7-C PF01927.16 gi|15920410|ref|NP_376079.1| - 4.1e-38 130.8 6.7 2.3e-35 121.9 6.7 2.0 1 1 0 1 1 1 1 Mut7-C RNAse domain DUF5615 PF18480.1 gi|15920410|ref|NP_376079.1| - 2.1e-05 24.2 0.0 3.9e-05 23.3 0.0 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF5615) IBR PF01485.21 gi|15920410|ref|NP_376079.1| - 0.0012 19.0 1.4 0.0024 18.1 1.4 1.4 1 0 0 1 1 1 1 IBR domain, a half RING-finger domain OrfB_Zn_ribbon PF07282.11 gi|15920410|ref|NP_376079.1| - 0.016 15.1 0.2 0.028 14.4 0.2 1.5 1 0 0 1 1 1 0 Putative transposase DNA-binding domain HypA PF01155.19 gi|15920410|ref|NP_376079.1| - 0.038 14.0 0.4 0.05 13.6 0.4 1.3 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Rep_fac-A_C PF08646.10 gi|15920410|ref|NP_376079.1| - 0.044 13.5 2.0 0.066 13.0 2.0 1.3 1 0 0 1 1 1 0 Replication factor-A C terminal domain DUF4974 PF16344.5 gi|15920410|ref|NP_376079.1| - 0.051 13.6 0.0 0.11 12.5 0.0 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4974) Zn_ribbon_SprT PF17283.2 gi|15920410|ref|NP_376079.1| - 0.064 13.2 1.7 3.3 7.7 1.2 2.4 2 0 0 2 2 2 0 SprT-like zinc ribbon domain zf-C2H2_3 PF13878.6 gi|15920410|ref|NP_376079.1| - 0.078 12.8 0.6 9.2 6.2 0.1 2.9 3 0 0 3 3 3 0 zinc-finger of acetyl-transferase ESCO zinc_ribbon_10 PF10058.9 gi|15920410|ref|NP_376079.1| - 0.086 12.6 1.9 0.18 11.6 1.9 1.5 1 0 0 1 1 1 0 Predicted integral membrane zinc-ribbon metal-binding protein Zn-ribbon_8 PF09723.10 gi|15920410|ref|NP_376079.1| - 0.38 10.9 2.3 0.99 9.6 2.2 1.7 1 1 0 1 1 1 0 Zinc ribbon domain HalOD2 PF18547.1 gi|15920410|ref|NP_376079.1| - 7.6 6.5 7.6 1.5 8.8 1.7 2.2 1 1 1 2 2 2 0 Halobacterial output domain 2 YajC PF02699.15 gi|15920411|ref|NP_376080.1| - 0.42 10.5 0.1 0.42 10.5 0.1 2.8 3 0 0 3 3 3 0 Preprotein translocase subunit PHO4 PF01384.20 gi|15920411|ref|NP_376080.1| - 3.4 6.6 6.8 4.2 6.3 6.8 1.3 1 1 0 1 1 1 0 Phosphate transporter family S_4TM PF18159.1 gi|15920411|ref|NP_376080.1| - 4 6.6 6.2 0.34 10.2 1.1 1.6 2 0 0 2 2 2 0 SMODS-associating 4TM effector domain UPF0242 PF06785.11 gi|15920411|ref|NP_376080.1| - 4.6 7.3 7.7 5.8 7.0 7.7 1.2 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus RseC_MucC PF04246.12 gi|15920411|ref|NP_376080.1| - 5.4 7.0 7.1 8 6.4 6.2 1.6 1 1 1 2 2 2 0 Positive regulator of sigma(E), RseC/MucC FbpA PF05833.11 gi|15920412|ref|NP_376081.1| - 2e-31 109.3 28.9 4e-31 108.3 28.9 1.4 1 1 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) NFACT-R_1 PF05670.13 gi|15920412|ref|NP_376081.1| - 7e-25 87.8 0.0 2.1e-24 86.2 0.0 1.8 1 0 0 1 1 1 1 NFACT protein RNA binding domain NFACT-R_2 PF18297.1 gi|15920412|ref|NP_376081.1| - 4.2e-05 23.7 0.0 0.00038 20.6 0.0 2.6 2 0 0 2 2 2 1 NFACT protein RNA binding domain OmpH PF03938.14 gi|15920412|ref|NP_376081.1| - 0.016 15.5 14.1 0.052 13.9 2.2 2.8 2 0 0 2 2 2 0 Outer membrane protein (OmpH-like) CCDC-167 PF15188.6 gi|15920412|ref|NP_376081.1| - 0.017 15.5 4.9 0.017 15.5 4.9 3.7 2 1 1 3 3 2 0 Coiled-coil domain-containing protein 167 MIP-T3_C PF17749.1 gi|15920412|ref|NP_376081.1| - 0.027 14.5 1.7 0.027 14.5 1.7 3.0 3 0 0 3 3 3 0 Microtubule-binding protein MIP-T3 C-terminal region HetR_C PF18460.1 gi|15920412|ref|NP_376081.1| - 0.21 11.6 4.0 0.073 13.0 0.7 2.0 2 0 0 2 2 1 0 Heterocyst differentiation regulator C-terminal Hood domain COG2 PF06148.11 gi|15920412|ref|NP_376081.1| - 0.59 10.2 8.4 3.3 7.8 0.2 2.6 2 0 0 2 2 2 0 COG (conserved oligomeric Golgi) complex component, COG2 Telomere_reg-2 PF10193.9 gi|15920412|ref|NP_376081.1| - 0.69 10.4 4.0 0.29 11.6 0.5 2.1 2 0 0 2 2 2 0 Telomere length regulation protein DUF4140 PF13600.6 gi|15920412|ref|NP_376081.1| - 1.1 9.8 7.3 7.3 7.1 1.0 2.9 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) EMP24_GP25L PF01105.24 gi|15920412|ref|NP_376081.1| - 2.7 7.9 16.4 5 7.0 5.9 2.4 1 1 1 2 2 2 0 emp24/gp25L/p24 family/GOLD Tweety PF04906.13 gi|15920412|ref|NP_376081.1| - 3.3 6.3 5.9 0.94 8.1 2.4 1.7 1 1 1 2 2 2 0 Tweety UPF0449 PF15136.6 gi|15920412|ref|NP_376081.1| - 3.4 8.2 11.5 3.4 8.2 2.8 2.8 2 0 0 2 2 2 0 Uncharacterised protein family UPF0449 DUF1043 PF06295.12 gi|15920412|ref|NP_376081.1| - 4.7 7.2 10.8 23 5.0 4.8 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1043) DUF5402 PF17393.2 gi|15920412|ref|NP_376081.1| - 8.7 6.3 8.3 1.4 8.8 0.1 3.5 4 0 0 4 4 4 0 Family of unknown function (DUF5402) DUF883 PF05957.13 gi|15920412|ref|NP_376081.1| - 9.9 6.8 6.4 1.8 9.2 0.9 2.2 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF883) RIO1 PF01163.22 gi|15920414|ref|NP_376083.1| - 2.4e-38 131.6 0.6 3.5e-38 131.1 0.2 1.5 2 0 0 2 2 2 1 RIO1 family Rio2_N PF09202.11 gi|15920414|ref|NP_376083.1| - 7.7e-14 51.7 0.7 2.1e-13 50.3 0.7 1.7 1 0 0 1 1 1 1 Rio2, N-terminal APH PF01636.23 gi|15920414|ref|NP_376083.1| - 4.4e-05 23.5 0.0 0.0034 17.3 0.0 2.1 2 0 0 2 2 2 1 Phosphotransferase enzyme family Pkinase PF00069.25 gi|15920414|ref|NP_376083.1| - 5.7e-05 22.6 0.1 0.00017 21.1 0.1 1.7 1 1 0 1 1 1 1 Protein kinase domain Choline_kinase PF01633.20 gi|15920414|ref|NP_376083.1| - 0.0032 17.1 0.2 1.7 8.2 0.0 2.7 2 1 1 3 3 3 2 Choline/ethanolamine kinase Kdo PF06293.14 gi|15920414|ref|NP_376083.1| - 0.056 12.8 0.1 5.1 6.4 0.0 2.3 1 1 0 2 2 2 0 Lipopolysaccharide kinase (Kdo/WaaP) family Pkinase_fungal PF17667.1 gi|15920414|ref|NP_376083.1| - 0.076 11.8 0.0 0.11 11.3 0.0 1.1 1 0 0 1 1 1 0 Fungal protein kinase DUF460 PF04312.13 gi|15920415|ref|NP_376084.1| - 7.4e-51 171.6 2.2 2.1e-50 170.1 0.6 2.3 2 0 0 2 2 2 1 Protein of unknown function (DUF460) Fib_alpha PF08702.10 gi|15920415|ref|NP_376084.1| - 0.023 14.9 14.2 0.027 14.7 12.5 2.0 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family FlaC_arch PF05377.11 gi|15920415|ref|NP_376084.1| - 0.081 13.3 6.2 4.5 7.7 0.2 3.9 2 1 0 2 2 2 0 Flagella accessory protein C (FlaC) DUF641 PF04859.12 gi|15920415|ref|NP_376084.1| - 0.11 12.8 6.6 0.039 14.3 2.7 2.1 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) DUF4200 PF13863.6 gi|15920415|ref|NP_376084.1| - 0.12 12.8 17.2 1.8 9.0 9.2 2.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4200) UPF0184 PF03670.13 gi|15920415|ref|NP_376084.1| - 0.13 12.7 1.2 14 6.2 0.2 3.2 2 1 1 3 3 3 0 Uncharacterised protein family (UPF0184) DUF4258 PF14076.6 gi|15920415|ref|NP_376084.1| - 0.17 12.3 2.4 2.7 8.4 0.1 3.5 3 1 0 3 3 3 0 Domain of unknown function (DUF4258) DivIC PF04977.15 gi|15920415|ref|NP_376084.1| - 0.19 11.5 9.7 3.7 7.4 0.1 2.8 2 0 0 2 2 2 0 Septum formation initiator ZnuA PF01297.17 gi|15920415|ref|NP_376084.1| - 0.34 10.3 4.6 5.6 6.3 3.3 2.5 2 0 0 2 2 2 0 Zinc-uptake complex component A periplasmic V_ATPase_I PF01496.19 gi|15920415|ref|NP_376084.1| - 0.84 7.5 13.3 0.31 8.9 9.2 2.1 2 1 0 2 2 2 0 V-type ATPase 116kDa subunit family Prefoldin_2 PF01920.20 gi|15920415|ref|NP_376084.1| - 0.84 9.6 14.6 0.59 10.1 2.1 3.2 1 1 1 2 2 2 0 Prefoldin subunit DUF3450 PF11932.8 gi|15920415|ref|NP_376084.1| - 1.2 8.4 10.5 1.7 7.9 7.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) DUF1664 PF07889.12 gi|15920415|ref|NP_376084.1| - 1.2 9.1 5.6 3.6 7.7 1.2 3.1 2 1 1 3 3 3 0 Protein of unknown function (DUF1664) FAM76 PF16046.5 gi|15920415|ref|NP_376084.1| - 1.6 8.0 5.5 3.2 7.0 5.5 1.4 1 0 0 1 1 1 0 FAM76 protein Mod_r PF07200.13 gi|15920415|ref|NP_376084.1| - 2.1 8.4 12.9 0.28 11.3 6.1 2.7 3 0 0 3 3 3 0 Modifier of rudimentary (Mod(r)) protein DUF848 PF05852.11 gi|15920415|ref|NP_376084.1| - 2.3 8.3 9.2 2.8 8.0 4.3 2.6 1 1 1 2 2 2 0 Gammaherpesvirus protein of unknown function (DUF848) YabA PF06156.13 gi|15920415|ref|NP_376084.1| - 5 7.8 8.4 71 4.1 4.3 3.2 2 1 1 3 3 3 0 Initiation control protein YabA AdoMet_Synthase PF01941.19 gi|15920416|ref|NP_376085.1| - 7.8e-173 574.8 7.0 8.7e-173 574.6 7.0 1.0 1 0 0 1 1 1 1 S-adenosylmethionine synthetase (AdoMet synthetase) LSM PF01423.22 gi|15920417|ref|NP_376086.1| - 4.3e-21 74.4 0.1 5.1e-21 74.1 0.1 1.1 1 0 0 1 1 1 1 LSM domain HTH_5 PF01022.20 gi|15920419|ref|NP_376088.1| - 1.2e-13 50.6 1.5 7.9e-13 48.1 0.7 2.0 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|15920419|ref|NP_376088.1| - 2.4e-07 30.7 0.1 3.2e-07 30.3 0.1 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|15920419|ref|NP_376088.1| - 1.1e-06 28.4 0.0 1.7e-06 27.8 0.0 1.5 1 1 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|15920419|ref|NP_376088.1| - 1.2e-06 27.9 0.4 2.4e-06 27.0 0.4 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_34 PF13601.6 gi|15920419|ref|NP_376088.1| - 2.4e-06 27.6 0.3 3.3e-06 27.2 0.3 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain MarR PF01047.22 gi|15920419|ref|NP_376088.1| - 2.6e-05 24.1 0.2 4e-05 23.5 0.2 1.4 1 0 0 1 1 1 1 MarR family Cdc6_C PF09079.11 gi|15920419|ref|NP_376088.1| - 0.00017 21.5 0.1 0.00044 20.2 0.0 1.7 1 1 1 2 2 2 1 CDC6, C terminal winged helix domain TrmB PF01978.19 gi|15920419|ref|NP_376088.1| - 0.00028 20.7 0.1 0.00048 20.0 0.1 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_1 PF00126.27 gi|15920419|ref|NP_376088.1| - 0.00033 20.5 0.0 0.0005 20.0 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family HTH_27 PF13463.6 gi|15920419|ref|NP_376088.1| - 0.00046 20.6 0.1 0.00066 20.1 0.1 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_IclR PF09339.10 gi|15920419|ref|NP_376088.1| - 0.0006 19.6 0.1 0.001 18.8 0.1 1.4 1 1 0 1 1 1 1 IclR helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|15920419|ref|NP_376088.1| - 0.00085 19.2 0.2 0.0015 18.5 0.2 1.6 1 1 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_11 PF08279.12 gi|15920419|ref|NP_376088.1| - 0.0012 18.8 0.3 0.0025 17.7 0.3 1.6 1 0 0 1 1 1 1 HTH domain Fe_dep_repress PF01325.19 gi|15920419|ref|NP_376088.1| - 0.022 14.9 0.1 0.042 14.0 0.1 1.6 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain Rrf2 PF02082.20 gi|15920419|ref|NP_376088.1| - 0.027 14.8 0.3 0.038 14.4 0.3 1.3 1 0 0 1 1 1 0 Transcriptional regulator DUF2513 PF10711.9 gi|15920419|ref|NP_376088.1| - 0.029 14.7 0.2 0.036 14.4 0.2 1.2 1 0 0 1 1 1 0 Hypothetical protein (DUF2513) Sigma70_r4_2 PF08281.12 gi|15920419|ref|NP_376088.1| - 0.036 13.7 0.2 0.067 12.9 0.2 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 DUF2250 PF10007.9 gi|15920419|ref|NP_376088.1| - 0.055 13.6 0.7 0.069 13.3 0.7 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_26 PF13443.6 gi|15920419|ref|NP_376088.1| - 0.065 13.7 0.2 0.26 11.8 0.1 2.0 2 0 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain HTH_28 PF13518.6 gi|15920419|ref|NP_376088.1| - 0.13 12.4 0.0 0.18 12.0 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain SgrR_N PF12793.7 gi|15920419|ref|NP_376088.1| - 0.15 12.3 0.0 0.18 12.0 0.0 1.2 1 0 0 1 1 1 0 Sugar transport-related sRNA regulator N-term CTP_synth_N PF06418.14 gi|161751103|ref|NP_376089.2| - 1.4e-120 401.6 4.5 1.9e-120 401.1 4.5 1.2 1 0 0 1 1 1 1 CTP synthase N-terminus GATase PF00117.28 gi|161751103|ref|NP_376089.2| - 1e-54 185.2 0.0 1.9e-54 184.3 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|161751103|ref|NP_376089.2| - 2.1e-12 47.3 0.0 5.4e-11 42.7 0.0 2.3 1 1 1 2 2 2 1 Peptidase C26 CbiA PF01656.23 gi|161751103|ref|NP_376089.2| - 4.1e-06 26.9 0.0 1.3e-05 25.3 0.0 1.9 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ArsA_ATPase PF02374.15 gi|161751103|ref|NP_376089.2| - 0.0037 16.5 3.0 0.046 12.9 0.4 2.3 1 1 1 2 2 2 2 Anion-transporting ATPase AAA_31 PF13614.6 gi|161751103|ref|NP_376089.2| - 0.048 13.6 0.0 0.12 12.3 0.0 1.7 1 0 0 1 1 1 0 AAA domain MeaB PF03308.16 gi|161751103|ref|NP_376089.2| - 0.053 12.5 0.1 0.089 11.8 0.1 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB ParA PF10609.9 gi|161751103|ref|NP_376089.2| - 0.097 12.1 0.2 0.53 9.7 0.1 2.1 2 0 0 2 2 2 0 NUBPL iron-transfer P-loop NTPase OMPdecase PF00215.24 gi|15920421|ref|NP_376090.1| - 5.6e-21 75.2 5.1 6.9e-21 74.9 5.1 1.1 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family NanE PF04131.14 gi|15920421|ref|NP_376090.1| - 2.9e-07 29.9 1.7 5.4e-06 25.7 0.4 2.2 1 1 0 2 2 2 1 Putative N-acetylmannosamine-6-phosphate epimerase QRPTase_C PF01729.19 gi|15920421|ref|NP_376090.1| - 0.00027 20.7 2.6 0.00076 19.3 0.6 2.1 1 1 1 2 2 2 1 Quinolinate phosphoribosyl transferase, C-terminal domain PEP_hydrolase PF09370.10 gi|15920421|ref|NP_376090.1| - 0.0012 18.1 1.1 0.037 13.2 0.0 2.1 1 1 1 2 2 2 2 Phosphoenolpyruvate hydrolase-like 4HFCP_synth PF04476.13 gi|15920421|ref|NP_376090.1| - 0.0018 18.1 1.3 3.6 7.2 0.3 3.1 1 1 2 3 3 3 2 4-HFC-P synthase Pterin_bind PF00809.22 gi|15920421|ref|NP_376090.1| - 0.012 15.3 1.0 1.2 8.7 0.0 2.2 2 0 0 2 2 2 0 Pterin binding enzyme Ribul_P_3_epim PF00834.19 gi|15920421|ref|NP_376090.1| - 0.06 12.7 2.3 0.28 10.6 0.5 2.3 2 1 0 2 2 2 0 Ribulose-phosphate 3 epimerase family SpmSyn_N PF17950.1 gi|15920422|ref|NP_376091.1| - 0.041 14.1 0.2 0.062 13.5 0.2 1.3 1 0 0 1 1 1 0 S-adenosylmethionine decarboxylase N -terminal DUF2153 PF09921.9 gi|15920423|ref|NP_376092.1| - 7.5e-51 171.1 5.8 9.1e-51 170.8 5.8 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2153) Trm112p PF03966.16 gi|15920424|ref|NP_376093.1| - 6.9e-21 74.6 2.4 9.8e-21 74.1 2.4 1.2 1 0 0 1 1 1 1 Trm112p-like protein zf-UDP PF14569.6 gi|15920424|ref|NP_376093.1| - 0.0088 16.1 1.1 0.022 14.9 0.2 2.0 2 1 0 2 2 2 1 Zinc-binding RING-finger zf-ribbon_3 PF13248.6 gi|15920424|ref|NP_376093.1| - 0.061 12.8 3.1 4.6 6.8 0.2 2.6 2 0 0 2 2 2 0 zinc-ribbon domain DUF2724 PF10893.8 gi|15920424|ref|NP_376093.1| - 0.074 12.9 0.1 1.7 8.6 0.0 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF2724) zf-RING_7 PF02591.15 gi|15920424|ref|NP_376093.1| - 0.98 9.7 0.0 0.98 9.7 0.0 3.0 4 0 0 4 4 4 0 C4-type zinc ribbon domain zf-RRN7 PF11781.8 gi|15920424|ref|NP_376093.1| - 3.7 7.3 7.3 2.5 7.9 2.1 3.1 2 1 1 3 3 3 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 PGM_PMM_I PF02878.16 gi|15920425|ref|NP_376094.1| - 2.2e-45 153.8 0.0 4.3e-45 152.8 0.0 1.5 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I PGM_PMM_II PF02879.16 gi|15920425|ref|NP_376094.1| - 1.7e-22 80.0 0.0 3.6e-22 78.9 0.0 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II PGM_PMM_III PF02880.16 gi|15920425|ref|NP_376094.1| - 3e-19 69.3 0.0 6.1e-19 68.3 0.0 1.6 1 0 0 1 1 1 1 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III PGM_PMM_IV PF00408.20 gi|15920425|ref|NP_376094.1| - 3.1e-11 43.3 0.1 1.2e-10 41.4 0.0 2.1 2 0 0 2 2 2 1 Phosphoglucomutase/phosphomannomutase, C-terminal domain Laminin_II PF06009.12 gi|15920426|ref|NP_376095.1| - 0.01 15.9 9.2 0.015 15.3 9.2 1.3 1 0 0 1 1 1 0 Laminin Domain II YscO PF07321.12 gi|15920426|ref|NP_376095.1| - 0.011 15.7 4.1 0.015 15.2 4.1 1.3 1 0 0 1 1 1 0 Type III secretion protein YscO Nop14 PF04147.12 gi|15920426|ref|NP_376095.1| - 0.026 12.8 7.7 0.032 12.5 7.7 1.1 1 0 0 1 1 1 0 Nop14-like family PIN_8 PF18476.1 gi|15920426|ref|NP_376095.1| - 0.03 14.2 5.5 0.034 14.0 5.5 1.1 1 0 0 1 1 1 0 PIN like domain Xpo1 PF08389.12 gi|15920426|ref|NP_376095.1| - 0.035 14.2 2.0 0.036 14.1 2.0 1.1 1 0 0 1 1 1 0 Exportin 1-like protein Muted PF14942.6 gi|15920426|ref|NP_376095.1| - 0.035 14.4 10.8 0.039 14.3 10.8 1.1 1 0 0 1 1 1 0 Organelle biogenesis, Muted-like protein DUF5617 PF18493.1 gi|15920426|ref|NP_376095.1| - 0.077 13.1 6.7 0.14 12.2 0.7 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF5617) DUF4404 PF14357.6 gi|15920426|ref|NP_376095.1| - 0.13 13.0 4.7 0.17 12.6 2.8 1.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4404) RP-C_C PF11800.8 gi|15920426|ref|NP_376095.1| - 0.15 12.1 1.8 0.17 11.9 1.8 1.1 1 0 0 1 1 1 0 Replication protein C C-terminal region Z1 PF10593.9 gi|15920426|ref|NP_376095.1| - 0.16 11.5 3.2 0.17 11.4 3.2 1.0 1 0 0 1 1 1 0 Z1 domain Bromodomain PF00439.25 gi|15920426|ref|NP_376095.1| - 0.24 11.5 3.1 0.83 9.8 0.2 2.1 1 1 1 2 2 2 0 Bromodomain Fib_alpha PF08702.10 gi|15920426|ref|NP_376095.1| - 0.71 10.0 8.3 0.88 9.7 8.3 1.2 1 0 0 1 1 1 0 Fibrinogen alpha/beta chain family Histone_HNS PF00816.21 gi|15920426|ref|NP_376095.1| - 0.77 10.6 8.8 2.2 9.2 1.4 2.1 1 1 0 2 2 2 0 H-NS histone family BST2 PF16716.5 gi|15920426|ref|NP_376095.1| - 1.1 9.8 7.5 2.9 8.5 7.4 1.8 1 1 0 1 1 1 0 Bone marrow stromal antigen 2 IL22 PF14565.6 gi|15920426|ref|NP_376095.1| - 2.2 8.5 7.8 2.7 8.3 1.6 2.0 1 1 1 2 2 2 0 Interleukin 22 IL-10-related T-cell-derived-inducible factor TMPIT PF07851.13 gi|15920426|ref|NP_376095.1| - 2.8 7.1 6.9 3 7.0 6.9 1.1 1 0 0 1 1 1 0 TMPIT-like protein DUF711 PF05167.12 gi|15920428|ref|NP_376097.1| - 5e-125 417.6 0.5 6.2e-125 417.3 0.5 1.0 1 0 0 1 1 1 1 Uncharacterised ACR (DUF711) DUF374 PF04028.13 gi|15920428|ref|NP_376097.1| - 0.02 14.5 1.7 4.5 6.9 0.2 3.0 3 0 0 3 3 3 0 Domain of unknown function (DUF374) SirB PF04247.12 gi|15920429|ref|NP_376098.1| - 0.0091 16.1 0.4 0.014 15.5 0.4 1.3 1 0 0 1 1 1 1 Invasion gene expression up-regulator, SirB DDE_Tnp_2 PF04693.12 gi|15920431|ref|NP_376100.1| - 4.4e-35 121.5 0.5 5.3e-35 121.2 0.5 1.1 1 0 0 1 1 1 1 Archaeal putative transposase ISC1217 HTH_Crp_2 PF13545.6 gi|15920431|ref|NP_376100.1| - 0.072 13.1 0.0 0.14 12.1 0.0 1.6 1 1 0 1 1 1 0 Crp-like helix-turn-helix domain LPD22 PF18834.1 gi|15920431|ref|NP_376100.1| - 0.11 12.7 0.0 0.26 11.5 0.0 1.6 1 0 0 1 1 1 0 Large polyvalent protein associated domain 22 DDE_Tnp_2 PF04693.12 gi|15920432|ref|NP_376101.1| - 3e-73 246.9 0.5 3.6e-73 246.6 0.5 1.1 1 0 0 1 1 1 1 Archaeal putative transposase ISC1217 DDE_Tnp_1 PF01609.21 gi|15920432|ref|NP_376101.1| - 0.0001 22.0 0.0 0.00011 21.9 0.0 1.2 1 0 0 1 1 1 1 Transposase DDE domain ParBc PF02195.18 gi|15920434|ref|NP_376103.1| - 3.9e-07 30.3 0.0 4.4e-07 30.1 0.0 1.1 1 0 0 1 1 1 1 ParB-like nuclease domain HTH_45 PF14947.6 gi|15920435|ref|NP_376104.1| - 6.4e-10 38.9 1.3 7.9e-10 38.6 1.3 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix TrmB PF01978.19 gi|15920435|ref|NP_376104.1| - 0.00017 21.4 0.1 0.00026 20.8 0.1 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB DUF4364 PF14277.6 gi|15920435|ref|NP_376104.1| - 0.00071 19.4 0.4 0.00089 19.0 0.4 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4364) Rrf2 PF02082.20 gi|15920435|ref|NP_376104.1| - 0.0011 19.2 0.1 0.0012 19.2 0.1 1.2 1 0 0 1 1 1 1 Transcriptional regulator HTH_IclR PF09339.10 gi|15920435|ref|NP_376104.1| - 0.0064 16.3 0.0 0.01 15.6 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_24 PF13412.6 gi|15920435|ref|NP_376104.1| - 0.015 14.9 0.2 0.033 13.7 0.0 1.7 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_40 PF14493.6 gi|15920435|ref|NP_376104.1| - 0.038 14.4 0.2 0.043 14.3 0.2 1.1 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_DeoR PF08220.12 gi|15920435|ref|NP_376104.1| - 0.043 13.6 0.0 0.068 12.9 0.0 1.4 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain TFIIE_beta PF02186.15 gi|15920435|ref|NP_376104.1| - 0.08 13.2 0.0 0.15 12.4 0.0 1.5 1 0 0 1 1 1 0 TFIIE beta subunit core domain Mrr_N PF14338.6 gi|15920435|ref|NP_376104.1| - 0.088 13.0 0.0 0.15 12.2 0.0 1.5 1 1 0 1 1 1 0 Mrr N-terminal domain Ribosomal_S19e PF01090.19 gi|15920435|ref|NP_376104.1| - 0.12 12.0 0.0 0.14 11.8 0.0 1.1 1 0 0 1 1 1 0 Ribosomal protein S19e Wound_ind PF08186.11 gi|15920436|ref|NP_376105.1| - 0.38 11.2 0.1 0.38 11.2 0.1 1.9 2 0 0 2 2 2 0 Wound-inducible basic protein family MarR_2 PF12802.7 gi|15920437|ref|NP_376106.1| - 1.2e-05 25.1 0.1 1.9e-05 24.4 0.1 1.3 1 0 0 1 1 1 1 MarR family HTH_IclR PF09339.10 gi|15920437|ref|NP_376106.1| - 3.2e-05 23.6 0.4 7e-05 22.6 0.1 1.8 2 1 0 2 2 2 1 IclR helix-turn-helix domain HTH_34 PF13601.6 gi|15920437|ref|NP_376106.1| - 0.00011 22.3 0.1 0.00014 21.9 0.1 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.19 gi|15920437|ref|NP_376106.1| - 0.00018 21.3 0.8 0.00024 20.9 0.5 1.4 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|15920437|ref|NP_376106.1| - 0.00033 20.1 0.8 0.00067 19.2 0.8 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_9 PF08221.11 gi|15920437|ref|NP_376106.1| - 0.00034 20.7 0.1 0.00067 19.7 0.1 1.5 1 0 0 1 1 1 1 RNA polymerase III subunit RPC82 helix-turn-helix domain HxlR PF01638.17 gi|15920437|ref|NP_376106.1| - 0.00075 19.3 0.4 0.0012 18.6 0.4 1.5 1 1 0 1 1 1 1 HxlR-like helix-turn-helix PadR PF03551.14 gi|15920437|ref|NP_376106.1| - 0.0011 18.9 0.2 0.0014 18.6 0.2 1.2 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family Rrf2 PF02082.20 gi|15920437|ref|NP_376106.1| - 0.0015 18.8 0.6 0.0028 18.0 0.2 1.5 2 0 0 2 2 2 1 Transcriptional regulator HTH_27 PF13463.6 gi|15920437|ref|NP_376106.1| - 0.0021 18.5 0.1 0.0034 17.8 0.1 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_19 PF12844.7 gi|15920437|ref|NP_376106.1| - 0.0054 16.7 0.4 0.017 15.1 0.4 2.0 1 1 0 1 1 1 1 Helix-turn-helix domain SpoU_methylase PF00588.19 gi|15920437|ref|NP_376106.1| - 0.0066 16.6 0.1 0.03 14.5 0.0 1.8 1 1 1 2 2 2 1 SpoU rRNA Methylase family MarR PF01047.22 gi|15920437|ref|NP_376106.1| - 0.014 15.3 0.1 0.023 14.6 0.1 1.4 1 0 0 1 1 1 0 MarR family Phage_rep_O PF04492.13 gi|15920437|ref|NP_376106.1| - 0.027 15.1 0.1 0.046 14.3 0.1 1.5 1 1 0 1 1 1 0 Bacteriophage replication protein O Penicillinase_R PF03965.16 gi|15920437|ref|NP_376106.1| - 0.031 14.6 0.4 0.036 14.4 0.4 1.1 1 0 0 1 1 1 0 Penicillinase repressor RPA_C PF08784.11 gi|15920437|ref|NP_376106.1| - 0.038 14.7 0.0 0.059 14.0 0.0 1.4 1 0 0 1 1 1 0 Replication protein A C terminal HTH_20 PF12840.7 gi|15920437|ref|NP_376106.1| - 0.066 13.3 0.3 0.14 12.2 0.3 1.5 1 1 0 1 1 1 0 Helix-turn-helix domain GntR PF00392.21 gi|15920437|ref|NP_376106.1| - 0.07 12.8 0.5 0.07 12.8 0.5 1.7 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family Phage_rep_org_N PF09681.10 gi|15920437|ref|NP_376106.1| - 0.075 13.0 0.2 0.085 12.8 0.2 1.2 1 0 0 1 1 1 0 N-terminal phage replisome organiser (Phage_rep_org_N) DUF977 PF06163.11 gi|15920437|ref|NP_376106.1| - 0.08 12.9 0.1 0.097 12.6 0.1 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF977) MRP-S26 PF14943.6 gi|15920438|ref|NP_376107.1| - 0.011 15.7 0.9 0.012 15.5 0.9 1.1 1 0 0 1 1 1 0 Mitochondrial ribosome subunit S26 FTR PF01913.18 gi|15920440|ref|NP_376109.1| - 0.15 12.0 0.0 0.2 11.6 0.0 1.1 1 0 0 1 1 1 0 Formylmethanofuran-tetrahydromethanopterin formyltransferase DUF1286 PF06939.11 gi|15920442|ref|NP_376111.1| - 1.1e-44 151.3 6.8 1.1e-44 151.3 6.8 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF1286) YdjM PF04307.14 gi|15920442|ref|NP_376111.1| - 2.6e-05 23.6 3.7 3.8e-05 23.1 3.7 1.3 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase DUF4184 PF13803.6 gi|15920442|ref|NP_376111.1| - 0.81 9.4 5.9 0.56 9.9 0.1 2.4 2 1 1 3 3 3 0 Domain of unknown function (DUF4184) Phage_integrase PF00589.22 gi|15920443|ref|NP_376112.1| - 5.8e-15 55.5 0.0 1.1e-14 54.6 0.0 1.4 1 1 0 1 1 1 1 Phage integrase family Phage_integr_3 PF16795.5 gi|15920443|ref|NP_376112.1| - 1.9e-08 34.4 1.1 3.2e-05 23.9 0.1 2.3 2 0 0 2 2 2 2 Archaeal phage integrase HTH_3 PF01381.22 gi|15920444|ref|NP_376113.1| - 9.9e-07 28.7 0.1 1.9e-06 27.8 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix HTH_26 PF13443.6 gi|15920444|ref|NP_376113.1| - 0.00053 20.4 0.0 0.00083 19.8 0.0 1.3 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_31 PF13560.6 gi|15920444|ref|NP_376113.1| - 0.0024 18.2 0.0 0.0043 17.4 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.10 gi|15920444|ref|NP_376113.1| - 0.0029 17.4 0.0 0.0074 16.1 0.0 1.7 2 0 0 2 2 2 1 IclR helix-turn-helix domain HTH_38 PF13936.6 gi|15920444|ref|NP_376113.1| - 0.012 15.3 0.0 0.023 14.4 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_23 PF13384.6 gi|15920444|ref|NP_376113.1| - 0.037 13.8 0.0 0.11 12.3 0.0 1.8 2 0 0 2 2 2 0 Homeodomain-like domain HTH_17 PF12728.7 gi|15920444|ref|NP_376113.1| - 0.061 13.5 0.5 0.55 10.5 0.0 2.5 3 0 0 3 3 3 0 Helix-turn-helix domain DFP PF04127.15 gi|15920445|ref|NP_376114.1| - 2e-55 187.5 0.9 1.2e-54 185.0 0.3 2.1 2 0 0 2 2 2 1 DNA / pantothenate metabolism flavoprotein Flavoprotein PF02441.19 gi|15920445|ref|NP_376114.1| - 4.6e-38 130.5 0.8 8.5e-38 129.6 0.8 1.4 1 0 0 1 1 1 1 Flavoprotein FlpD PF02662.16 gi|15920445|ref|NP_376114.1| - 0.027 14.5 0.0 0.15 12.1 0.0 2.1 2 1 0 2 2 2 0 Methyl-viologen-reducing hydrogenase, delta subunit Acetyltransf_1 PF00583.25 gi|15920446|ref|NP_376115.1| - 1.5e-20 73.5 0.1 1.9e-20 73.2 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|15920446|ref|NP_376115.1| - 1e-15 57.9 0.1 1.6e-15 57.3 0.1 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|15920446|ref|NP_376115.1| - 2.3e-13 50.2 0.1 4.7e-13 49.2 0.1 1.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|15920446|ref|NP_376115.1| - 4e-09 36.3 0.1 6e-09 35.7 0.1 1.2 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 gi|15920446|ref|NP_376115.1| - 1.6e-06 28.2 0.1 4.7e-06 26.7 0.1 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|15920446|ref|NP_376115.1| - 1.7e-06 28.3 1.4 1.6e-05 25.1 1.4 2.4 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|15920446|ref|NP_376115.1| - 4.5e-06 26.4 0.0 1.2e-05 25.0 0.0 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|15920446|ref|NP_376115.1| - 2.6e-05 24.9 0.0 3.5e-05 24.5 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 gi|15920446|ref|NP_376115.1| - 0.00057 19.4 0.3 0.00063 19.3 0.3 1.3 1 0 0 1 1 1 1 Putative acetyl-transferase DUF4821 PF16092.5 gi|15920446|ref|NP_376115.1| - 0.013 15.1 0.0 0.025 14.2 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4821) Acetyltransf_18 PF18014.1 gi|15920446|ref|NP_376115.1| - 0.067 13.0 0.0 2.2 8.2 0.0 2.2 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain GNAT_acetyltran PF12746.7 gi|15920446|ref|NP_376115.1| - 0.12 11.9 0.0 0.21 11.1 0.0 1.3 1 0 0 1 1 1 0 GNAT acetyltransferase Metallophos_3 PF14582.6 gi|15920447|ref|NP_376116.1| - 2.5e-06 27.0 0.5 1.3e-05 24.7 0.1 1.9 1 1 0 2 2 2 1 Metallophosphoesterase, calcineurin superfamily Metallophos_2 PF12850.7 gi|15920447|ref|NP_376116.1| - 0.0014 18.9 0.0 0.0032 17.7 0.0 1.5 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain MRP-S23 PF10484.9 gi|15920447|ref|NP_376116.1| - 0.099 12.9 0.0 1.1 9.5 0.0 2.0 1 1 1 2 2 2 0 Mitochondrial ribosomal protein S23 CitG PF01874.16 gi|15920448|ref|NP_376117.1| - 3.1e-36 125.5 0.0 3.5e-36 125.3 0.0 1.0 1 0 0 1 1 1 1 ATP:dephospho-CoA triphosphoribosyl transferase NTP_transf_2 PF01909.23 gi|15920449|ref|NP_376118.1| - 0.00093 19.4 0.6 0.0022 18.2 0.4 1.8 1 1 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|15920449|ref|NP_376118.1| - 0.0072 16.4 0.8 0.02 15.0 0.8 1.8 1 1 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase DUF1464 PF07318.12 gi|15920450|ref|NP_376119.1| - 1.1e-109 366.5 0.2 1.4e-109 366.3 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1464) Pox_A22 PF04848.13 gi|15920451|ref|NP_376120.1| - 0.024 14.7 0.5 0.057 13.5 0.3 1.8 2 0 0 2 2 2 0 Poxvirus A22 protein RHH_5 PF07878.11 gi|15920451|ref|NP_376120.1| - 0.07 13.0 0.0 0.14 12.1 0.0 1.5 1 0 0 1 1 1 0 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 ABC_tran PF00005.27 gi|15920454|ref|NP_376123.1| - 2.5e-32 112.3 0.0 3.4e-32 111.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|15920454|ref|NP_376123.1| - 1.7e-13 51.1 1.8 4e-06 26.8 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_10 PF12846.7 gi|15920454|ref|NP_376123.1| - 0.00044 19.3 0.1 0.039 12.9 0.0 2.1 2 0 0 2 2 2 2 AAA-like domain AAA_29 PF13555.6 gi|15920454|ref|NP_376123.1| - 0.00064 19.4 0.0 0.0012 18.5 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 gi|15920454|ref|NP_376123.1| - 0.0021 17.8 2.1 0.023 14.4 0.0 2.1 1 1 0 2 2 2 1 AAA ATPase domain AAA_5 PF07728.14 gi|15920454|ref|NP_376123.1| - 0.0027 17.7 0.0 0.018 15.1 0.0 2.1 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) SMC_N PF02463.19 gi|15920454|ref|NP_376123.1| - 0.0027 17.2 2.0 1.1 8.6 0.2 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|15920454|ref|NP_376123.1| - 0.018 15.5 0.2 0.038 14.5 0.2 1.4 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|15920454|ref|NP_376123.1| - 0.021 14.8 0.1 0.065 13.1 0.0 1.8 2 1 1 3 3 3 0 RsgA GTPase SbcCD_C PF13558.6 gi|15920454|ref|NP_376123.1| - 0.071 13.4 0.0 1.2 9.5 0.0 2.2 1 1 1 2 2 2 0 Putative exonuclease SbcCD, C subunit CLP1_P PF16575.5 gi|15920454|ref|NP_376123.1| - 0.074 12.8 0.0 0.14 12.0 0.0 1.4 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA PF00004.29 gi|15920454|ref|NP_376123.1| - 0.095 13.1 0.3 0.4 11.1 0.3 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 gi|15920454|ref|NP_376123.1| - 0.096 12.4 0.0 0.15 11.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 gi|15920454|ref|NP_376123.1| - 0.11 12.6 0.1 0.24 11.5 0.1 1.9 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_30 PF13604.6 gi|15920454|ref|NP_376123.1| - 0.15 11.8 0.0 0.35 10.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain Acetyltransf_1 PF00583.25 gi|15920455|ref|NP_376124.1| - 2.6e-14 53.4 0.1 3.7e-14 53.0 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|15920455|ref|NP_376124.1| - 6.2e-10 39.4 0.3 9.6e-10 38.8 0.3 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|15920455|ref|NP_376124.1| - 7.6e-10 38.8 0.1 1e-09 38.4 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|15920455|ref|NP_376124.1| - 9.1e-08 32.0 0.0 1.5e-07 31.3 0.0 1.4 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_3 PF13302.7 gi|15920455|ref|NP_376124.1| - 2.8e-07 31.3 0.0 3.6e-07 30.9 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|15920455|ref|NP_376124.1| - 4.6e-05 23.5 0.0 8.3e-05 22.6 0.0 1.3 1 0 0 1 1 1 1 GCN5-related N-acetyl-transferase Acetyltransf_4 PF13420.7 gi|15920455|ref|NP_376124.1| - 0.00019 21.6 1.2 0.00027 21.1 1.2 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|15920455|ref|NP_376124.1| - 0.0025 17.5 0.0 0.028 14.1 0.0 2.0 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 gi|15920455|ref|NP_376124.1| - 0.0025 17.3 6.6 0.0051 16.3 5.1 1.9 1 1 1 2 2 2 1 Putative acetyl-transferase MOZ_SAS PF01853.18 gi|15920455|ref|NP_376124.1| - 0.0055 16.4 0.8 0.014 15.0 0.8 1.6 1 1 0 1 1 1 1 MOZ/SAS family Acetyltransf_9 PF13527.7 gi|15920455|ref|NP_376124.1| - 0.0064 16.6 0.0 0.012 15.6 0.0 1.6 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain XendoU PF09412.10 gi|15920455|ref|NP_376124.1| - 0.012 14.8 0.7 0.055 12.7 0.1 1.9 2 0 0 2 2 2 0 Endoribonuclease XendoU HMG_box_5 PF14887.6 gi|15920455|ref|NP_376124.1| - 0.048 13.6 0.4 0.087 12.8 0.4 1.3 1 0 0 1 1 1 0 HMG (high mobility group) box 5 Gly_acyl_tr_C PF08444.10 gi|15920455|ref|NP_376124.1| - 0.081 13.2 0.0 0.14 12.4 0.0 1.5 1 1 0 1 1 1 0 Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region CbiZ PF01955.18 gi|15920456|ref|NP_376125.1| - 4.2e-21 75.9 0.0 6.6e-21 75.3 0.0 1.3 1 1 0 1 1 1 1 Adenosylcobinamide amidohydrolase Ribosomal_S10 PF00338.22 gi|15920457|ref|NP_376126.1| - 1.1e-27 96.2 0.1 1.2e-27 96.0 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S10p/S20e PriA_C PF18074.1 gi|15920457|ref|NP_376126.1| - 0.063 14.1 0.0 0.12 13.2 0.0 1.4 1 0 0 1 1 1 0 Primosomal protein N C-terminal domain GTP_EFTU PF00009.27 gi|15920458|ref|NP_376127.1| - 1.1e-53 181.7 0.1 1.4e-53 181.3 0.1 1.2 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 gi|15920458|ref|NP_376127.1| - 3.4e-37 127.2 0.4 7.7e-37 126.0 0.1 1.8 2 0 0 2 2 2 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 gi|15920458|ref|NP_376127.1| - 3.4e-17 62.6 5.8 1.5e-15 57.3 4.4 2.8 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|15920458|ref|NP_376127.1| - 1.5e-05 25.1 0.1 6.5e-05 23.0 0.1 2.1 1 1 0 1 1 1 1 50S ribosome-binding GTPase GTP_EFTU_D4 PF14578.6 gi|15920458|ref|NP_376127.1| - 0.00015 21.6 3.4 0.00015 21.6 3.4 2.1 2 0 0 2 2 2 1 Elongation factor Tu domain 4 SRPRB PF09439.10 gi|15920458|ref|NP_376127.1| - 0.00039 19.9 0.1 0.13 11.7 0.0 2.2 1 1 1 2 2 2 2 Signal recognition particle receptor beta subunit RsgA_GTPase PF03193.16 gi|15920458|ref|NP_376127.1| - 0.0029 17.5 0.2 0.18 11.7 0.0 2.5 1 1 1 2 2 2 1 RsgA GTPase Septin PF00735.18 gi|15920458|ref|NP_376127.1| - 0.0035 16.7 0.1 0.018 14.3 0.1 2.0 1 1 0 1 1 1 1 Septin Dynamin_N PF00350.23 gi|15920458|ref|NP_376127.1| - 0.045 13.8 0.0 4.4 7.3 0.0 2.5 1 1 1 2 2 2 0 Dynamin family MoaC PF01967.21 gi|15920458|ref|NP_376127.1| - 0.063 13.4 0.6 1.1 9.3 0.2 2.2 2 0 0 2 2 2 0 MoaC family Arf PF00025.21 gi|15920458|ref|NP_376127.1| - 0.068 12.6 0.4 1.2 8.6 0.0 2.5 3 0 0 3 3 3 0 ADP-ribosylation factor family Roc PF08477.13 gi|15920458|ref|NP_376127.1| - 0.13 12.5 0.3 6.3 7.0 0.1 2.4 1 1 1 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase Ribosomal_S7 PF00177.21 gi|15920459|ref|NP_376128.1| - 1.6e-44 151.1 0.9 2e-44 150.8 0.9 1.0 1 0 0 1 1 1 1 Ribosomal protein S7p/S5e DUF1801 PF08818.11 gi|15920459|ref|NP_376128.1| - 0.16 12.5 0.0 0.42 11.2 0.0 1.7 1 0 0 1 1 1 0 Domain of unknown function (DU1801) DNase-RNase PF02577.14 gi|15920460|ref|NP_376129.1| - 1e-06 28.4 0.2 1.4e-06 27.9 0.2 1.2 1 0 0 1 1 1 1 Bifunctional nuclease Ribosom_S12_S23 PF00164.25 gi|15920461|ref|NP_376130.1| - 8.2e-48 160.8 0.3 1e-47 160.4 0.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S12/S23 KH_2 PF07650.17 gi|161751102|ref|NP_376131.2| - 1.7e-19 69.4 1.7 3.3e-14 52.5 0.1 2.1 1 1 1 2 2 2 2 KH domain KH_5 PF13184.6 gi|161751102|ref|NP_376131.2| - 1e-15 57.6 1.4 1.1e-14 54.2 0.4 2.2 2 0 0 2 2 2 1 NusA-like KH domain KH_4 PF13083.6 gi|161751102|ref|NP_376131.2| - 1.6e-12 47.1 0.2 2.1e-06 27.5 0.0 2.2 2 0 0 2 2 2 2 KH domain KH_1 PF00013.29 gi|161751102|ref|NP_376131.2| - 3.3e-06 26.8 0.4 0.0011 18.7 0.1 2.3 2 0 0 2 2 2 2 KH domain Ribosomal_L7Ae PF01248.26 gi|15920463|ref|NP_376132.1| - 2.1e-19 69.1 0.0 2.3e-19 68.9 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family eRF1_3 PF03465.15 gi|15920463|ref|NP_376132.1| - 0.02 15.4 0.0 0.022 15.3 0.0 1.2 1 0 0 1 1 1 0 eRF1 domain 3 RNA_pol_Rpb1_5 PF04998.17 gi|15920464|ref|NP_376133.1| - 5.3e-58 196.6 3.2 7.7e-58 196.0 3.2 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 SRP54_N PF02881.19 gi|15920464|ref|NP_376133.1| - 1.9 8.7 8.6 1.1 9.6 1.0 3.9 3 1 0 3 3 3 0 SRP54-type protein, helical bundle domain RNA_pol_Rpb1_1 PF04997.12 gi|15920465|ref|NP_376134.1| - 2e-102 342.7 0.0 3e-102 342.1 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 1 RNA_pol_Rpb1_2 PF00623.20 gi|15920465|ref|NP_376134.1| - 1.9e-76 255.9 0.0 6.7e-76 254.1 0.0 1.9 2 0 0 2 2 2 1 RNA polymerase Rpb1, domain 2 RNA_pol_Rpb1_3 PF04983.18 gi|15920465|ref|NP_376134.1| - 2.6e-37 128.2 0.0 5e-37 127.3 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 3 RNA_pol_Rpb1_4 PF05000.17 gi|15920465|ref|NP_376134.1| - 6.4e-32 109.7 0.0 1.3e-31 108.7 0.0 1.5 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 4 RNA_pol_Rpb1_5 PF04998.17 gi|15920465|ref|NP_376134.1| - 6.3e-25 88.1 0.0 1.2e-24 87.2 0.0 1.4 1 0 0 1 1 1 1 RNA polymerase Rpb1, domain 5 CpXC PF14353.6 gi|15920465|ref|NP_376134.1| - 0.049 13.7 4.9 0.087 12.9 0.1 3.1 1 1 1 2 2 2 0 CpXC protein DZR PF12773.7 gi|15920465|ref|NP_376134.1| - 0.095 12.7 0.9 1.9 8.6 0.2 2.3 2 0 0 2 2 2 0 Double zinc ribbon zf-FPG_IleRS PF06827.14 gi|15920465|ref|NP_376134.1| - 0.13 12.1 5.9 0.67 9.9 0.2 3.4 3 0 0 3 3 3 0 Zinc finger found in FPG and IleRS Zn-ribbon_8 PF09723.10 gi|15920465|ref|NP_376134.1| - 0.2 11.8 1.9 31 4.8 0.0 3.3 3 0 0 3 3 3 0 Zinc ribbon domain zf-ISL3 PF14690.6 gi|15920465|ref|NP_376134.1| - 0.75 10.5 7.6 14 6.4 0.1 3.5 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf-ribbon_3 PF13248.6 gi|15920465|ref|NP_376134.1| - 1 8.9 8.6 9.5 5.8 0.4 3.6 3 0 0 3 3 3 0 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|15920465|ref|NP_376134.1| - 1.2 9.2 6.5 9.8 6.2 0.0 3.5 3 0 0 3 3 3 0 Transposase zinc-ribbon domain HypA PF01155.19 gi|15920465|ref|NP_376134.1| - 1.3 9.0 2.8 8.5 6.4 2.8 2.2 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA RNA_pol_Rpb2_6 PF00562.28 gi|15920466|ref|NP_376135.1| - 2.7e-129 431.7 0.0 3.8e-129 431.1 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 6 RNA_pol_Rpb2_1 PF04563.15 gi|15920466|ref|NP_376135.1| - 3.4e-55 186.7 0.0 5e-55 186.2 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase beta subunit RNA_pol_Rpb2_2 PF04561.14 gi|15920466|ref|NP_376135.1| - 2.5e-42 144.7 0.3 5.1e-42 143.7 0.1 1.7 2 0 0 2 2 2 1 RNA polymerase Rpb2, domain 2 RNA_pol_Rpb2_7 PF04560.20 gi|15920466|ref|NP_376135.1| - 1.1e-29 102.6 0.0 2.5e-29 101.5 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 7 RNA_pol_Rpb2_3 PF04565.16 gi|15920466|ref|NP_376135.1| - 6.2e-25 87.2 0.0 1.3e-24 86.1 0.0 1.6 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 3 RNA_pol_Rpb2_4 PF04566.13 gi|15920466|ref|NP_376135.1| - 2.2e-23 82.3 0.6 5.8e-23 81.0 0.6 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 4 RNA_pol_Rpb2_5 PF04567.17 gi|15920466|ref|NP_376135.1| - 5.2e-11 42.9 0.0 1.4e-10 41.6 0.0 1.8 1 0 0 1 1 1 1 RNA polymerase Rpb2, domain 5 DUF4431 PF14485.6 gi|15920466|ref|NP_376135.1| - 0.1 12.4 0.0 0.49 10.2 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4431) RNA_pol_Rpb5_C PF01191.19 gi|15920467|ref|NP_376136.1| - 1.9e-30 104.5 0.6 2.8e-30 104.0 0.1 1.5 2 0 0 2 2 2 1 RNA polymerase Rpb5, C-terminal domain malic PF00390.19 gi|15920468|ref|NP_376137.1| - 2.6e-26 92.5 0.3 1.7e-17 63.8 0.3 2.5 1 1 1 2 2 2 2 Malic enzyme, N-terminal domain Malic_M PF03949.15 gi|15920468|ref|NP_376137.1| - 6.2e-24 84.7 0.0 6e-23 81.4 0.0 2.1 1 1 0 1 1 1 1 Malic enzyme, NAD binding domain GTP_EFTU_D4 PF14578.6 gi|15920469|ref|NP_376138.1| - 4.6e-37 125.8 2.6 4.6e-37 125.8 2.6 2.2 2 0 0 2 2 2 1 Elongation factor Tu domain 4 GTP_EFTU PF00009.27 gi|15920469|ref|NP_376138.1| - 5.3e-33 114.2 0.0 1.4e-32 112.8 0.0 1.7 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain IF-2 PF11987.8 gi|15920469|ref|NP_376138.1| - 3.1e-15 56.2 2.3 9.4e-15 54.6 2.3 1.8 1 0 0 1 1 1 1 Translation-initiation factor 2 GTP_EFTU_D2 PF03144.25 gi|15920469|ref|NP_376138.1| - 6.6e-13 48.9 2.8 4.2e-12 46.3 0.1 2.8 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|15920469|ref|NP_376138.1| - 9.9e-07 28.8 0.1 6e-06 26.3 0.0 2.3 2 0 0 2 2 2 1 50S ribosome-binding GTPase Roc PF08477.13 gi|15920469|ref|NP_376138.1| - 0.00034 20.8 0.0 0.00073 19.7 0.0 1.6 1 0 0 1 1 1 1 Ras of Complex, Roc, domain of DAPkinase Arf PF00025.21 gi|15920469|ref|NP_376138.1| - 0.0032 16.9 0.1 4.6 6.7 0.0 3.3 2 1 0 2 2 2 2 ADP-ribosylation factor family Dynamin_N PF00350.23 gi|15920469|ref|NP_376138.1| - 0.0048 17.0 0.4 0.073 13.1 0.0 2.8 3 0 0 3 3 3 1 Dynamin family Ras PF00071.22 gi|15920469|ref|NP_376138.1| - 0.0086 15.7 0.0 0.13 11.9 0.0 3.0 1 1 0 1 1 1 1 Ras family MobB PF03205.14 gi|15920469|ref|NP_376138.1| - 0.031 14.2 0.3 5.1 7.0 0.0 2.9 3 0 0 3 3 2 0 Molybdopterin guanine dinucleotide synthesis protein B PduV-EutP PF10662.9 gi|15920469|ref|NP_376138.1| - 0.035 13.8 0.6 2 8.1 0.0 3.5 4 1 0 4 4 4 0 Ethanolamine utilisation - propanediol utilisation RsgA_GTPase PF03193.16 gi|15920469|ref|NP_376138.1| - 0.073 13.0 0.2 5.2 7.0 0.0 3.5 2 1 1 4 4 4 0 RsgA GTPase NDK PF00334.19 gi|15920470|ref|NP_376139.1| - 5.7e-59 198.0 0.1 6.4e-59 197.8 0.1 1.0 1 0 0 1 1 1 1 Nucleoside diphosphate kinase Ribosomal_L24e PF01246.20 gi|15920471|ref|NP_376140.1| - 2.8e-21 75.5 0.8 3.3e-21 75.3 0.8 1.0 1 0 0 1 1 1 1 Ribosomal protein L24e zf-FCS PF06467.14 gi|15920471|ref|NP_376140.1| - 8e-06 25.7 1.1 1.2e-05 25.1 1.1 1.3 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif zf-MYND PF01753.18 gi|15920471|ref|NP_376140.1| - 0.0031 17.6 0.0 0.0049 16.9 0.0 1.4 1 1 0 1 1 1 1 MYND finger YHS PF04945.13 gi|15920471|ref|NP_376140.1| - 0.0038 17.3 0.0 0.0062 16.6 0.0 1.4 1 1 0 1 1 1 1 YHS domain zf-FLZ PF04570.14 gi|15920471|ref|NP_376140.1| - 0.008 15.6 0.7 0.016 14.7 0.7 1.5 1 1 0 1 1 1 1 zinc-finger of the FCS-type, C2-C2 DUF2116 PF09889.9 gi|15920471|ref|NP_376140.1| - 0.012 15.6 1.3 1.9 8.5 0.1 2.1 2 0 0 2 2 2 0 Uncharacterized protein containing a Zn-ribbon (DUF2116) Arc_trans_TRASH PF08394.10 gi|15920471|ref|NP_376140.1| - 0.018 15.4 0.4 0.04 14.3 0.4 1.6 1 1 0 1 1 1 0 Archaeal TRASH domain DUF3268 PF11672.8 gi|15920471|ref|NP_376140.1| - 0.026 14.8 0.0 0.03 14.6 0.0 1.1 1 0 0 1 1 1 0 zinc-finger-containing domain Ta0938 PF11494.8 gi|15920471|ref|NP_376140.1| - 0.07 13.4 0.0 0.081 13.2 0.0 1.1 1 0 0 1 1 1 0 Ta0938 zf_UBZ PF18439.1 gi|15920471|ref|NP_376140.1| - 0.17 11.5 1.3 1.5 8.5 0.1 2.1 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger VATC PF18716.1 gi|15920471|ref|NP_376140.1| - 0.24 11.3 3.4 1.7 8.5 3.4 2.0 1 1 0 1 1 1 0 Vms1-associating treble clef domain zf-C4_ClpX PF06689.13 gi|15920471|ref|NP_376140.1| - 0.27 11.2 3.7 0.43 10.5 3.7 1.6 1 1 0 1 1 1 0 ClpX C4-type zinc finger Ribosomal_S28e PF01200.18 gi|15920472|ref|NP_376141.1| - 1.4e-31 108.3 2.3 1.7e-31 108.0 2.3 1.1 1 0 0 1 1 1 1 Ribosomal protein S28e KOW PF00467.29 gi|15920472|ref|NP_376141.1| - 0.24 11.4 2.4 0.63 10.1 0.1 2.4 2 1 0 2 2 2 0 KOW motif UPRTase PF14681.6 gi|15920473|ref|NP_376142.1| - 7.3e-54 182.4 0.1 8.3e-54 182.2 0.1 1.0 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase Pribosyltran PF00156.27 gi|15920473|ref|NP_376142.1| - 3.8e-13 49.3 0.2 5e-13 48.9 0.2 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain GatB_N PF02934.15 gi|15920474|ref|NP_376143.1| - 5.3e-99 331.0 0.0 7.1e-99 330.6 0.0 1.1 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.18 gi|15920474|ref|NP_376143.1| - 2e-43 147.8 3.1 2e-43 147.8 3.1 1.8 2 0 0 2 2 2 1 GatB domain Pribosyltran PF00156.27 gi|15920475|ref|NP_376144.1| - 2.4e-13 49.9 1.0 4.9e-13 48.9 1.0 1.5 1 1 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|15920475|ref|NP_376144.1| - 0.0029 17.1 0.1 0.0047 16.4 0.1 1.3 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase HTH_3 PF01381.22 gi|15920475|ref|NP_376144.1| - 0.0093 16.0 0.0 0.026 14.6 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix HTH_Tnp_4 PF13613.6 gi|15920475|ref|NP_376144.1| - 0.027 14.2 0.0 0.054 13.2 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix of DDE superfamily endonuclease PRTase_2 PF15609.6 gi|15920475|ref|NP_376144.1| - 0.078 12.5 0.1 0.13 11.8 0.1 1.3 1 0 0 1 1 1 0 Phosphoribosyl transferase HTH_23 PF13384.6 gi|15920475|ref|NP_376144.1| - 0.16 11.8 0.0 0.32 10.8 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain HTH_11 PF08279.12 gi|15920475|ref|NP_376144.1| - 1.5 8.9 3.7 7 6.7 0.0 2.8 3 0 0 3 3 3 0 HTH domain Lactamase_B PF00753.27 gi|15920476|ref|NP_376145.1| - 0.079 13.0 0.1 0.12 12.3 0.1 1.4 1 1 0 1 1 1 0 Metallo-beta-lactamase superfamily RibD_C PF01872.17 gi|15920477|ref|NP_376146.1| - 5.4e-40 137.4 0.0 6e-40 137.2 0.0 1.0 1 0 0 1 1 1 1 RibD C-terminal domain Radical_SAM PF04055.21 gi|15920478|ref|NP_376147.1| - 3.5e-20 73.0 0.1 3.5e-20 73.0 0.1 1.9 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|15920478|ref|NP_376147.1| - 6.8e-07 29.4 1.4 1.4e-06 28.5 0.0 2.1 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_12 PF13353.6 gi|15920478|ref|NP_376147.1| - 4.4e-06 27.0 1.1 7.9e-06 26.2 0.1 1.9 1 1 1 2 2 2 1 4Fe-4S single cluster domain Peptidase_S13 PF02113.15 gi|15920478|ref|NP_376147.1| - 0.058 12.1 0.0 0.17 10.6 0.0 1.7 2 0 0 2 2 2 0 D-Ala-D-Ala carboxypeptidase 3 (S13) family HMGL-like PF00682.19 gi|15920478|ref|NP_376147.1| - 0.082 12.5 0.0 0.32 10.5 0.0 1.8 1 1 1 2 2 2 0 HMGL-like DUF4925 PF16272.5 gi|15920478|ref|NP_376147.1| - 0.13 11.7 0.0 0.27 10.7 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4925) AIRS PF00586.24 gi|15920479|ref|NP_376148.1| - 1.8e-12 47.7 0.0 3.2e-12 46.9 0.0 1.3 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain Lyase_1 PF00206.20 gi|15920480|ref|NP_376149.1| - 7.1e-48 163.6 0.0 1.1e-47 163.0 0.0 1.2 1 0 0 1 1 1 1 Lyase ADSL_C PF10397.9 gi|15920480|ref|NP_376149.1| - 2.1e-12 47.4 0.1 1.6e-11 44.6 0.1 2.5 3 0 0 3 3 3 1 Adenylosuccinate lyase C-terminus ASL_C PF08328.11 gi|15920480|ref|NP_376149.1| - 0.00029 20.9 0.4 0.00072 19.6 0.4 1.7 1 0 0 1 1 1 1 Adenylosuccinate lyase C-terminal DUF1297 PF06973.12 gi|15920481|ref|NP_376150.1| - 3.7e-76 254.9 0.0 4.7e-76 254.5 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.12 gi|15920481|ref|NP_376150.1| - 2.6e-41 140.4 0.0 3.8e-41 139.9 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) GARS_A PF01071.19 gi|15920481|ref|NP_376150.1| - 0.00033 20.5 0.0 0.00088 19.1 0.0 1.6 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ATP-grasp_3 PF02655.14 gi|15920481|ref|NP_376150.1| - 0.0062 16.6 0.3 0.014 15.5 0.3 1.8 1 1 0 1 1 1 1 ATP-grasp domain ATP-grasp PF02222.22 gi|15920481|ref|NP_376150.1| - 0.029 13.9 0.6 1.1 8.8 0.1 2.2 2 0 0 2 2 2 0 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|15920481|ref|NP_376150.1| - 0.039 13.5 0.0 0.062 12.8 0.0 1.2 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain DUF1297 PF06973.12 gi|15920482|ref|NP_376151.1| - 4.3e-82 274.2 0.0 5.5e-82 273.9 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1297) DUF1246 PF06849.12 gi|15920482|ref|NP_376151.1| - 1.6e-46 157.2 0.0 2.7e-46 156.5 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1246) Adenylsucc_synt PF00709.21 gi|15920483|ref|NP_376152.1| - 8.6e-68 229.2 0.2 4.4e-36 124.7 0.0 3.0 1 1 2 3 3 3 3 Adenylosuccinate synthetase Pyr_redox_2 PF07992.14 gi|15920484|ref|NP_376153.1| - 3.7e-12 46.1 1.0 2.7e-05 23.6 0.0 3.2 3 0 0 3 3 3 3 Pyridine nucleotide-disulphide oxidoreductase HI0933_like PF03486.14 gi|15920484|ref|NP_376153.1| - 6.1e-11 41.7 0.0 1.2e-06 27.5 0.0 2.3 2 0 0 2 2 2 2 HI0933-like protein Pyr_redox_3 PF13738.6 gi|15920484|ref|NP_376153.1| - 2.5e-09 36.8 1.7 0.0021 17.4 0.1 3.2 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|15920484|ref|NP_376153.1| - 4.9e-09 35.8 0.1 0.00017 20.8 0.0 2.4 2 0 0 2 2 2 2 Glucose inhibited division protein A NAD_binding_8 PF13450.6 gi|15920484|ref|NP_376153.1| - 1.1e-06 28.7 0.0 1.6e-05 25.1 0.0 2.5 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|15920484|ref|NP_376153.1| - 3.2e-06 27.0 0.2 7.1e-05 22.5 0.0 2.6 2 1 0 2 2 2 1 FAD dependent oxidoreductase Thi4 PF01946.17 gi|15920484|ref|NP_376153.1| - 5.1e-05 22.6 0.1 0.00035 19.9 0.0 2.1 2 0 0 2 2 2 1 Thi4 family FAD_binding_2 PF00890.24 gi|15920484|ref|NP_376153.1| - 0.00038 19.7 0.4 0.0014 17.8 0.0 2.1 3 0 0 3 3 3 1 FAD binding domain NAD_binding_9 PF13454.6 gi|15920484|ref|NP_376153.1| - 0.0015 18.6 0.0 0.004 17.2 0.0 1.7 2 0 0 2 2 2 1 FAD-NAD(P)-binding Pyr_redox PF00070.27 gi|15920484|ref|NP_376153.1| - 0.002 18.6 0.1 1.9 9.1 0.0 3.6 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 gi|15920484|ref|NP_376153.1| - 0.0035 16.5 0.0 0.0053 15.9 0.0 1.2 1 0 0 1 1 1 1 Lycopene cyclase protein FAD_binding_3 PF01494.19 gi|15920484|ref|NP_376153.1| - 0.0084 15.4 0.0 0.017 14.4 0.0 1.4 1 0 0 1 1 1 1 FAD binding domain Trp_halogenase PF04820.14 gi|15920484|ref|NP_376153.1| - 0.017 14.0 0.0 0.043 12.7 0.0 1.6 2 0 0 2 2 2 0 Tryptophan halogenase AsnC_trans_reg2 PF17805.1 gi|15920485|ref|NP_376154.1| - 2.1e-31 107.9 1.8 4.4e-16 58.8 0.0 3.0 3 0 0 3 3 3 2 AsnC-like ligand binding domain HTH_AsnC-type PF13404.6 gi|15920485|ref|NP_376154.1| - 2e-05 24.3 0.0 0.00035 20.3 0.0 2.4 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|15920485|ref|NP_376154.1| - 0.00061 19.3 0.9 0.5 10.0 0.2 3.0 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding Sigma70_r4 PF04545.16 gi|15920485|ref|NP_376154.1| - 0.00066 19.1 0.0 0.0063 16.0 0.0 2.6 3 0 0 3 3 3 1 Sigma-70, region 4 HTH_36 PF13730.6 gi|15920485|ref|NP_376154.1| - 0.0018 18.2 0.0 1.9 8.5 0.0 3.1 2 0 0 2 2 2 2 Helix-turn-helix domain DUF2805 PF10985.8 gi|15920485|ref|NP_376154.1| - 0.0022 18.3 0.7 3.1 8.2 0.1 2.6 2 0 0 2 2 2 2 Protein of unknown function (DUF2805) Rrf2 PF02082.20 gi|15920485|ref|NP_376154.1| - 0.0079 16.5 0.1 1.1 9.7 0.0 2.7 2 0 0 2 2 2 1 Transcriptional regulator TrmB PF01978.19 gi|15920485|ref|NP_376154.1| - 0.025 14.5 0.6 7.1 6.6 0.0 3.0 3 0 0 3 3 3 0 Sugar-specific transcriptional regulator TrmB DUF334 PF03904.13 gi|15920485|ref|NP_376154.1| - 0.025 14.1 0.2 0.025 14.1 0.2 1.8 2 1 0 2 2 2 0 Domain of unknown function (DUF334) HTH_27 PF13463.6 gi|15920485|ref|NP_376154.1| - 0.026 15.0 0.0 0.58 10.7 0.0 2.4 2 0 0 2 2 2 0 Winged helix DNA-binding domain MarR PF01047.22 gi|15920485|ref|NP_376154.1| - 0.055 13.4 0.1 19 5.3 0.0 2.5 2 0 0 2 2 2 0 MarR family HTH_Crp_2 PF13545.6 gi|15920485|ref|NP_376154.1| - 0.069 13.1 0.0 16 5.5 0.0 2.4 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain DUF3023 PF11224.8 gi|15920485|ref|NP_376154.1| - 0.089 12.6 2.1 1.2 8.9 0.2 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3023) DUF3991 PF13154.6 gi|15920485|ref|NP_376154.1| - 0.15 12.5 0.5 0.73 10.2 0.1 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3991) DUF4342 PF14242.6 gi|15920485|ref|NP_376154.1| - 1.7 8.7 11.0 13 5.9 0.4 3.4 3 0 0 3 3 3 0 Domain of unknown function (DUF4342) IF2_N PF04760.15 gi|15920485|ref|NP_376154.1| - 9.7 6.1 15.2 4.8 7.1 0.4 5.1 5 2 0 5 5 5 0 Translation initiation factor IF-2, N-terminal region PDT PF00800.18 gi|15920486|ref|NP_376155.1| - 1.5e-21 77.0 1.3 1.5e-21 77.0 1.3 1.4 2 0 0 2 2 2 1 Prephenate dehydratase ACT PF01842.25 gi|15920486|ref|NP_376155.1| - 2.3e-06 27.3 0.0 5.3e-06 26.1 0.0 1.6 1 0 0 1 1 1 1 ACT domain Thr_dehydrat_C PF00585.18 gi|15920486|ref|NP_376155.1| - 0.021 14.6 0.1 0.15 11.9 0.0 2.4 3 0 0 3 3 3 0 C-terminal regulatory domain of Threonine dehydratase PALP PF00291.25 gi|15920487|ref|NP_376156.1| - 6.8e-81 271.9 0.1 7.9e-81 271.7 0.1 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme ACT PF01842.25 gi|15920487|ref|NP_376156.1| - 0.0018 18.0 0.4 0.0066 16.2 0.0 2.0 2 0 0 2 2 2 1 ACT domain ACT_4 PF13291.6 gi|15920487|ref|NP_376156.1| - 0.011 16.3 0.4 0.049 14.2 0.0 2.3 3 0 0 3 3 3 0 ACT domain ACT_6 PF13740.6 gi|15920487|ref|NP_376156.1| - 0.041 13.9 0.0 0.11 12.5 0.0 1.7 1 0 0 1 1 1 0 ACT domain HIT PF01230.23 gi|15920488|ref|NP_376157.1| - 1.6e-13 51.2 0.0 2.3e-13 50.7 0.0 1.2 1 0 0 1 1 1 1 HIT domain CwfJ_C_1 PF04677.15 gi|15920488|ref|NP_376157.1| - 9.5e-08 31.9 0.2 1.5e-07 31.3 0.2 1.3 1 1 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 DcpS_C PF11969.8 gi|15920488|ref|NP_376157.1| - 1.4e-06 28.8 0.0 2.6e-06 27.9 0.0 1.4 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding Rad51 PF08423.11 gi|15920489|ref|NP_376158.1| - 4.3e-90 301.4 0.0 5.1e-90 301.2 0.0 1.0 1 0 0 1 1 1 1 Rad51 RecA PF00154.21 gi|15920489|ref|NP_376158.1| - 8.6e-15 54.9 0.1 1.2e-14 54.4 0.1 1.2 1 0 0 1 1 1 1 recA bacterial DNA recombination protein HHH_5 PF14520.6 gi|15920489|ref|NP_376158.1| - 3.1e-11 43.7 0.4 1.5e-10 41.5 0.2 2.3 2 0 0 2 2 2 1 Helix-hairpin-helix domain ATPase PF06745.13 gi|15920489|ref|NP_376158.1| - 1.6e-09 37.5 0.1 3.2e-09 36.5 0.1 1.5 1 1 0 1 1 1 1 KaiC AAA_25 PF13481.6 gi|15920489|ref|NP_376158.1| - 1.7e-08 34.2 0.0 2.9e-08 33.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|15920489|ref|NP_376158.1| - 0.0011 18.8 0.0 0.003 17.3 0.0 1.7 1 1 0 1 1 1 1 AAA domain Cdd1 PF11731.8 gi|15920489|ref|NP_376158.1| - 0.0011 19.1 0.0 0.0025 18.0 0.0 1.5 1 0 0 1 1 1 1 Pathogenicity locus AAA_22 PF13401.6 gi|15920489|ref|NP_376158.1| - 0.0042 17.4 0.0 0.01 16.1 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|15920489|ref|NP_376158.1| - 0.017 15.7 0.0 0.067 13.7 0.0 2.0 1 1 0 1 1 1 0 AAA domain OCRL_clath_bd PF16726.5 gi|15920489|ref|NP_376158.1| - 0.1 12.8 0.0 0.25 11.5 0.0 1.6 1 0 0 1 1 1 0 Inositol polyphosphate 5-phosphatase clathrin binding domain HHH_2 PF12826.7 gi|15920489|ref|NP_376158.1| - 0.14 12.2 0.0 0.36 11.0 0.0 1.7 1 0 0 1 1 1 0 Helix-hairpin-helix motif UPF0113 PF03657.13 gi|15920490|ref|NP_376159.1| - 0.00036 20.7 0.3 0.0011 19.2 0.3 1.8 1 1 0 1 1 1 1 UPF0113 PUA domain Methyltr_RsmB-F PF01189.17 gi|15920491|ref|NP_376160.1| - 6.9e-53 179.3 0.0 9.2e-53 178.9 0.0 1.1 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltr_RsmF_N PF17125.5 gi|15920491|ref|NP_376160.1| - 9.9e-17 61.2 0.2 3.3e-16 59.5 0.0 1.9 2 0 0 2 2 2 1 N-terminal domain of 16S rRNA methyltransferase RsmF Methyltransf_31 PF13847.6 gi|15920491|ref|NP_376160.1| - 7.2e-08 32.4 0.0 1.3e-07 31.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|15920491|ref|NP_376160.1| - 1.4e-06 28.3 0.0 2.3e-06 27.5 0.0 1.3 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) FtsJ PF01728.19 gi|15920491|ref|NP_376160.1| - 0.00029 21.0 0.0 0.0006 20.0 0.0 1.7 1 1 0 1 1 1 1 FtsJ-like methyltransferase Methyltransf_4 PF02390.17 gi|15920491|ref|NP_376160.1| - 0.0004 19.9 0.1 0.0008 18.9 0.1 1.5 1 0 0 1 1 1 1 Putative methyltransferase Met_10 PF02475.16 gi|15920491|ref|NP_376160.1| - 0.0024 17.6 0.0 0.0043 16.8 0.0 1.3 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_25 PF13649.6 gi|15920491|ref|NP_376160.1| - 0.012 16.3 0.0 0.026 15.2 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain Fibrillarin PF01269.17 gi|15920491|ref|NP_376160.1| - 0.021 13.9 0.0 0.035 13.2 0.0 1.2 1 0 0 1 1 1 0 Fibrillarin TssC PF17541.2 gi|15920491|ref|NP_376160.1| - 0.041 12.7 0.1 0.065 12.1 0.1 1.2 1 0 0 1 1 1 0 Type VI secretion system, TssC, VipB RrnaAD PF00398.20 gi|15920491|ref|NP_376160.1| - 0.068 12.2 0.0 0.11 11.5 0.0 1.3 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase CYTH PF01928.21 gi|15920492|ref|NP_376161.1| - 1.6e-31 109.6 1.7 2.1e-31 109.3 1.7 1.0 1 0 0 1 1 1 1 CYTH domain SAM_adeno_trans PF01887.16 gi|15920493|ref|NP_376162.1| - 2.1e-63 213.9 0.0 2.3e-63 213.8 0.0 1.0 1 0 0 1 1 1 1 S-adenosyl-l-methionine hydroxide adenosyltransferase CTP_transf_like PF01467.26 gi|15920494|ref|NP_376163.1| - 0.043 14.0 0.0 0.055 13.7 0.0 1.2 1 0 0 1 1 1 0 Cytidylyltransferase-like Sulfolobus_pRN PF05584.11 gi|15920494|ref|NP_376163.1| - 0.11 12.6 0.1 0.16 12.0 0.1 1.3 1 0 0 1 1 1 0 Sulfolobus plasmid regulatory protein 4HBT PF03061.22 gi|15920495|ref|NP_376164.1| - 2e-22 79.3 0.0 1.3e-12 47.9 0.0 2.2 2 0 0 2 2 2 2 Thioesterase superfamily Ribosomal_L9_N PF01281.19 gi|15920495|ref|NP_376164.1| - 0.13 11.9 0.4 0.35 10.5 0.0 1.9 2 0 0 2 2 2 0 Ribosomal protein L9, N-terminal domain DUF99 PF01949.16 gi|15920496|ref|NP_376165.1| - 3.6e-23 81.9 0.0 4.7e-23 81.6 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF99 End_beta_propel PF12217.8 gi|15920496|ref|NP_376165.1| - 0.024 13.3 0.2 0.03 13.0 0.2 1.1 1 0 0 1 1 1 0 Catalytic beta propeller domain of bacteriophage endosialidase Cdc6_C PF09079.11 gi|15920497|ref|NP_376166.1| - 5.7e-25 87.1 0.4 1.6e-24 85.6 0.4 1.8 1 0 0 1 1 1 1 CDC6, C terminal winged helix domain AAA_22 PF13401.6 gi|15920497|ref|NP_376166.1| - 4.8e-14 52.8 0.0 1.8e-13 50.9 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|15920497|ref|NP_376166.1| - 2.3e-12 47.6 0.1 2.1e-10 41.2 0.0 2.7 2 1 0 2 2 2 1 AAA ATPase domain AAA PF00004.29 gi|15920497|ref|NP_376166.1| - 4.7e-09 36.8 0.1 1.2e-08 35.4 0.1 1.8 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.22 gi|15920497|ref|NP_376166.1| - 5.9e-08 32.2 0.0 3e-07 29.9 0.0 2.0 1 1 0 2 2 2 1 NB-ARC domain ATPase_2 PF01637.18 gi|15920497|ref|NP_376166.1| - 1.3e-06 28.5 0.9 4.2e-06 26.9 0.9 1.8 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea TniB PF05621.11 gi|15920497|ref|NP_376166.1| - 4.2e-06 26.3 0.0 8e-06 25.4 0.0 1.4 1 0 0 1 1 1 1 Bacterial TniB protein DUF815 PF05673.13 gi|15920497|ref|NP_376166.1| - 3.6e-05 23.1 0.0 5.9e-05 22.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF815) AAA_assoc_2 PF16193.5 gi|15920497|ref|NP_376166.1| - 0.00075 19.8 0.7 0.0033 17.7 0.6 2.2 1 1 0 1 1 1 1 AAA C-terminal domain Cytidylate_kin PF02224.18 gi|15920497|ref|NP_376166.1| - 0.00082 19.2 6.0 0.2 11.4 0.6 3.8 3 1 0 3 3 3 1 Cytidylate kinase AAA_32 PF13654.6 gi|15920497|ref|NP_376166.1| - 0.0011 17.8 0.7 0.012 14.4 0.0 2.2 2 0 0 2 2 2 1 AAA domain DEAD PF00270.29 gi|15920497|ref|NP_376166.1| - 0.0013 18.5 0.5 0.62 9.8 0.0 2.6 1 1 1 2 2 2 1 DEAD/DEAH box helicase ResIII PF04851.15 gi|15920497|ref|NP_376166.1| - 0.0019 18.2 0.0 0.0033 17.5 0.0 1.4 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit NACHT PF05729.12 gi|15920497|ref|NP_376166.1| - 0.0023 17.9 0.0 0.0042 17.0 0.0 1.4 1 0 0 1 1 1 1 NACHT domain E2F_TDP PF02319.20 gi|15920497|ref|NP_376166.1| - 0.0024 17.9 2.0 0.11 12.6 0.3 2.9 2 0 0 2 2 2 1 E2F/DP family winged-helix DNA-binding domain PIF1 PF05970.14 gi|15920497|ref|NP_376166.1| - 0.004 16.4 0.0 0.008 15.4 0.0 1.5 1 0 0 1 1 1 1 PIF1-like helicase Sigma54_activat PF00158.26 gi|15920497|ref|NP_376166.1| - 0.0052 16.5 0.0 0.02 14.6 0.0 1.9 1 1 0 1 1 1 1 Sigma-54 interaction domain AAA_7 PF12775.7 gi|15920497|ref|NP_376166.1| - 0.0074 15.8 0.0 0.013 15.0 0.0 1.3 1 0 0 1 1 1 1 P-loop containing dynein motor region KAP_NTPase PF07693.14 gi|15920497|ref|NP_376166.1| - 0.0077 15.5 2.6 0.026 13.8 0.0 2.3 2 1 1 3 3 2 1 KAP family P-loop domain ATP-synt_ab PF00006.25 gi|15920497|ref|NP_376166.1| - 0.0081 15.8 0.0 0.087 12.5 0.0 2.1 1 1 1 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain DUF2075 PF09848.9 gi|15920497|ref|NP_376166.1| - 0.0088 15.3 0.0 0.013 14.7 0.0 1.3 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) Bac_DnaA PF00308.18 gi|15920497|ref|NP_376166.1| - 0.011 15.6 0.4 0.89 9.4 0.0 2.2 2 0 0 2 2 2 0 Bacterial dnaA protein AAA_18 PF13238.6 gi|15920497|ref|NP_376166.1| - 0.013 16.1 0.0 0.032 14.8 0.0 1.8 1 0 0 1 1 1 0 AAA domain AAA_lid_10 PF17872.1 gi|15920497|ref|NP_376166.1| - 0.016 15.3 1.7 0.022 14.9 0.2 2.1 2 0 0 2 2 1 0 AAA lid domain Torsin PF06309.11 gi|15920497|ref|NP_376166.1| - 0.019 15.1 0.0 0.035 14.2 0.0 1.4 1 0 0 1 1 1 0 Torsin RuvB_N PF05496.12 gi|15920497|ref|NP_376166.1| - 0.027 14.2 0.0 0.27 11.0 0.0 2.2 2 0 0 2 2 2 0 Holliday junction DNA helicase RuvB P-loop domain TsaE PF02367.17 gi|15920497|ref|NP_376166.1| - 0.027 14.5 0.0 0.066 13.2 0.0 1.7 2 0 0 2 2 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE DAO_C PF16901.5 gi|15920497|ref|NP_376166.1| - 0.033 14.1 0.1 0.15 11.9 0.0 2.1 2 0 0 2 2 2 0 C-terminal domain of alpha-glycerophosphate oxidase IstB_IS21 PF01695.17 gi|15920497|ref|NP_376166.1| - 0.051 13.3 0.0 3.8 7.2 0.0 2.4 2 0 0 2 2 2 0 IstB-like ATP binding protein RNA_helicase PF00910.22 gi|15920497|ref|NP_376166.1| - 0.069 13.6 0.0 0.18 12.2 0.0 1.7 1 0 0 1 1 1 0 RNA helicase HTH_54 PF18607.1 gi|15920497|ref|NP_376166.1| - 0.11 12.6 0.1 1.2 9.2 0.0 2.4 1 1 1 2 2 2 0 ParA helix turn helix domain APG12 PF04110.13 gi|15920497|ref|NP_376166.1| - 0.12 12.8 0.2 0.6 10.5 0.1 2.2 1 1 1 2 2 1 0 Ubiquitin-like autophagy protein Apg12 DUF468 PF04318.12 gi|15920497|ref|NP_376166.1| - 0.18 12.5 0.3 0.36 11.6 0.3 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF468) SSV1_ORF_D-335 PF07935.11 gi|15920498|ref|NP_376167.1| - 4.3e-33 113.4 3.0 5.6e-33 113.0 3.0 1.1 1 0 0 1 1 1 1 ORF D-335-like protein SWIM PF04434.17 gi|15920499|ref|NP_376168.1| - 5.1e-05 22.8 0.2 8e-05 22.2 0.2 1.3 1 0 0 1 1 1 1 SWIM zinc finger Elf1 PF05129.13 gi|15920500|ref|NP_376169.1| - 1.7e-18 66.5 0.0 2.2e-18 66.0 0.0 1.2 1 0 0 1 1 1 1 Transcription elongation factor Elf1 like Lar_restr_allev PF14354.6 gi|15920500|ref|NP_376169.1| - 0.0017 18.7 0.3 0.0017 18.7 0.3 1.6 2 0 0 2 2 2 1 Restriction alleviation protein Lar zf-ribbon_3 PF13248.6 gi|15920500|ref|NP_376169.1| - 0.0063 15.9 2.5 0.31 10.5 0.1 2.3 2 0 0 2 2 2 1 zinc-ribbon domain RbpA PF13397.6 gi|15920500|ref|NP_376169.1| - 0.041 14.5 0.4 0.12 13.0 0.0 1.9 1 1 0 2 2 2 0 RNA polymerase-binding protein OrfB_Zn_ribbon PF07282.11 gi|15920500|ref|NP_376169.1| - 0.041 13.8 0.2 0.091 12.7 0.2 1.6 1 0 0 1 1 1 0 Putative transposase DNA-binding domain zinc_ribbon_4 PF13717.6 gi|15920500|ref|NP_376169.1| - 0.076 13.0 5.0 0.33 10.9 5.0 1.9 1 1 0 1 1 1 0 zinc-ribbon domain Ribosomal_L32p PF01783.23 gi|15920500|ref|NP_376169.1| - 0.082 13.2 1.6 0.2 12.0 0.3 1.9 2 0 0 2 2 2 0 Ribosomal L32p protein family eIF-5_eIF-2B PF01873.17 gi|15920500|ref|NP_376169.1| - 0.083 12.8 0.6 0.15 12.0 0.6 1.4 1 0 0 1 1 1 0 Domain found in IF2B/IF5 Zn_Tnp_IS1595 PF12760.7 gi|15920500|ref|NP_376169.1| - 0.089 12.8 1.8 0.25 11.3 1.9 1.7 1 1 0 1 1 1 0 Transposase zinc-ribbon domain Rubredoxin PF00301.20 gi|15920500|ref|NP_376169.1| - 0.14 12.2 1.4 0.35 10.9 0.2 2.0 2 0 0 2 2 2 0 Rubredoxin zf_UBZ PF18439.1 gi|15920500|ref|NP_376169.1| - 0.17 11.5 1.2 0.36 10.5 0.1 2.0 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger zf-Mss51 PF13824.6 gi|15920500|ref|NP_376169.1| - 0.63 10.2 2.9 1.1 9.4 0.2 2.3 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 zinc_ribbon_5 PF13719.6 gi|15920500|ref|NP_376169.1| - 1.4 8.7 4.5 4.1 7.2 4.5 1.7 1 1 0 1 1 1 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|15920500|ref|NP_376169.1| - 1.8 8.1 6.8 0.32 10.5 1.8 2.3 2 1 0 2 2 2 0 TFIIB zinc-binding PcrB PF01884.17 gi|15920502|ref|NP_376171.1| - 5.9e-55 186.2 1.8 7.3e-55 185.9 1.8 1.0 1 0 0 1 1 1 1 PcrB family His_biosynth PF00977.21 gi|15920502|ref|NP_376171.1| - 0.00063 19.3 0.1 0.00094 18.7 0.1 1.3 1 0 0 1 1 1 1 Histidine biosynthesis protein Ribul_P_3_epim PF00834.19 gi|15920502|ref|NP_376171.1| - 0.034 13.5 0.1 0.08 12.3 0.1 1.6 1 0 0 1 1 1 0 Ribulose-phosphate 3 epimerase family IMPDH PF00478.25 gi|15920502|ref|NP_376171.1| - 0.052 12.5 0.0 0.1 11.6 0.0 1.4 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain Sec61_beta PF03911.16 gi|15920503|ref|NP_376172.1| - 4.4e-15 55.4 2.0 4.9e-15 55.3 2.0 1.1 1 0 0 1 1 1 1 Sec61beta family ECF-ribofla_trS PF07155.12 gi|15920503|ref|NP_376172.1| - 0.005 16.9 0.0 0.0055 16.7 0.0 1.0 1 0 0 1 1 1 1 ECF-type riboflavin transporter, S component GNVR PF13807.6 gi|15920503|ref|NP_376172.1| - 0.02 14.8 0.9 0.03 14.2 0.9 1.3 1 1 0 1 1 1 0 G-rich domain on putative tyrosine kinase BatA PF07584.11 gi|15920503|ref|NP_376172.1| - 0.03 14.7 0.0 0.037 14.4 0.0 1.1 1 0 0 1 1 1 0 Aerotolerance regulator N-terminal 4HB_MCP_1 PF12729.7 gi|15920503|ref|NP_376172.1| - 6.9 6.2 6.7 8.9 5.8 6.7 1.2 1 0 0 1 1 1 0 Four helix bundle sensory module for signal transduction Ribo_biogen_C PF04034.13 gi|15920504|ref|NP_376173.1| - 4.2e-40 136.4 0.1 6.6e-40 135.8 0.1 1.3 2 0 0 2 2 2 1 Ribosome biogenesis protein, C-terminal RLI PF04068.15 gi|15920504|ref|NP_376173.1| - 2.5e-13 49.6 0.1 4e-13 48.9 0.1 1.3 1 0 0 1 1 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI AsnC_trans_reg PF01037.21 gi|15920505|ref|NP_376174.1| - 4.5e-17 61.8 0.7 5e-17 61.6 0.7 1.0 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain NapD PF03927.13 gi|15920505|ref|NP_376174.1| - 0.00019 21.4 0.3 0.00024 21.1 0.3 1.1 1 0 0 1 1 1 1 NapD protein GYD PF08734.11 gi|15920505|ref|NP_376174.1| - 0.0086 16.0 0.1 0.0096 15.9 0.1 1.2 1 0 0 1 1 1 1 GYD domain Spore_YhcN_YlaJ PF09580.10 gi|15920505|ref|NP_376174.1| - 0.0088 16.1 0.5 0.01 15.9 0.5 1.1 1 0 0 1 1 1 1 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) HMA PF00403.26 gi|15920505|ref|NP_376174.1| - 0.034 14.6 0.4 0.048 14.1 0.4 1.3 1 0 0 1 1 1 0 Heavy-metal-associated domain DUF1743 PF08489.11 gi|15920507|ref|NP_376176.1| - 5.6e-36 123.1 0.0 9.4e-36 122.4 0.0 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF1743) DNA_RNApol_7kD PF03604.13 gi|15920507|ref|NP_376176.1| - 0.0021 17.7 2.2 0.0077 15.9 2.2 2.0 1 0 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit tRNA_anti-codon PF01336.25 gi|15920507|ref|NP_376176.1| - 0.011 15.7 1.1 0.02 14.9 1.1 1.5 1 0 0 1 1 1 0 OB-fold nucleic acid binding domain Zn_Tnp_IS1595 PF12760.7 gi|15920507|ref|NP_376176.1| - 0.03 14.3 1.9 0.051 13.6 1.9 1.3 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|15920507|ref|NP_376176.1| - 0.033 14.3 1.0 7.1 6.8 0.2 2.3 2 0 0 2 2 2 0 Zinc ribbon domain OrfB_Zn_ribbon PF07282.11 gi|15920507|ref|NP_376176.1| - 0.064 13.2 1.3 0.099 12.6 0.4 1.7 2 0 0 2 2 2 0 Putative transposase DNA-binding domain Cnd1_N PF12922.7 gi|15920507|ref|NP_376176.1| - 0.079 12.8 0.0 0.13 12.1 0.0 1.2 1 0 0 1 1 1 0 non-SMC mitotic condensation complex subunit 1, N-term 3-HAO PF06052.12 gi|15920507|ref|NP_376176.1| - 0.093 12.4 0.1 0.22 11.2 0.1 1.6 1 0 0 1 1 1 0 3-hydroxyanthranilic acid dioxygenase zf_Rg PF17915.1 gi|15920507|ref|NP_376176.1| - 0.25 10.8 4.0 0.5 9.8 4.0 1.4 1 0 0 1 1 1 0 Reverse gyrase zinc finger zf-H2C2_2 PF13465.6 gi|15920507|ref|NP_376176.1| - 0.53 10.8 4.2 5.4 7.6 0.4 2.5 2 0 0 2 2 2 0 Zinc-finger double domain zinc_ribbon_4 PF13717.6 gi|15920507|ref|NP_376176.1| - 7.4 6.6 5.9 2.8 8.0 0.3 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Phage_integrase PF00589.22 gi|15920508|ref|NP_376177.1| - 9.1e-16 58.1 0.8 6.5e-15 55.3 0.0 2.5 3 1 0 3 3 3 1 Phage integrase family Phage_integr_3 PF16795.5 gi|15920508|ref|NP_376177.1| - 9.7e-09 35.3 1.1 6.8e-06 26.1 0.0 2.9 2 0 0 2 2 2 2 Archaeal phage integrase HTH_23 PF13384.6 gi|15920508|ref|NP_376177.1| - 0.0041 16.9 0.4 0.016 15.0 0.1 2.1 2 0 0 2 2 2 1 Homeodomain-like domain DUF4351 PF14261.6 gi|15920508|ref|NP_376177.1| - 0.01 15.9 0.2 5.4 7.1 0.0 3.4 3 0 0 3 3 3 0 Domain of unknown function (DUF4351) HTH_3 PF01381.22 gi|15920508|ref|NP_376177.1| - 0.012 15.7 0.0 0.04 14.0 0.0 2.0 1 0 0 1 1 1 0 Helix-turn-helix HTH_7 PF02796.15 gi|15920508|ref|NP_376177.1| - 0.017 15.2 0.3 0.12 12.4 0.2 2.5 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase Npa1 PF11707.8 gi|15920508|ref|NP_376177.1| - 0.02 14.3 0.3 1.3 8.4 0.0 2.2 2 0 0 2 2 2 0 Ribosome 60S biogenesis N-terminal HTH_31 PF13560.6 gi|15920508|ref|NP_376177.1| - 0.039 14.3 0.0 0.11 12.8 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_26 PF13443.6 gi|15920508|ref|NP_376177.1| - 0.04 14.4 0.1 0.82 10.2 0.0 2.4 2 0 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain DUF445 PF04286.12 gi|15920508|ref|NP_376177.1| - 0.041 13.7 4.3 0.1 12.4 4.1 1.9 1 1 0 1 1 1 0 Protein of unknown function (DUF445) HTH_28 PF13518.6 gi|15920508|ref|NP_376177.1| - 0.082 13.0 0.1 0.19 11.9 0.1 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_29 PF13551.6 gi|15920508|ref|NP_376177.1| - 0.087 12.9 0.1 0.19 11.7 0.1 1.6 1 0 0 1 1 1 0 Winged helix-turn helix HTH_40 PF14493.6 gi|15920508|ref|NP_376177.1| - 0.11 13.0 2.1 7.4 7.1 0.0 3.6 3 1 1 4 4 4 0 Helix-turn-helix domain HTH_38 PF13936.6 gi|15920508|ref|NP_376177.1| - 0.11 12.3 0.0 0.29 10.9 0.0 1.8 1 0 0 1 1 1 0 Helix-turn-helix domain AbiJ_NTD4 PF18863.1 gi|15920508|ref|NP_376177.1| - 0.47 10.9 3.3 30 5.0 0.0 2.9 2 1 0 2 2 2 0 AbiJ N-terminal domain 4 pRN1_helical PF13010.6 gi|15920509|ref|NP_376178.1| - 9.6e-19 67.7 2.9 9.6e-19 67.7 2.9 2.9 2 0 0 2 2 2 1 Primase helical domain D5_N PF08706.11 gi|15920509|ref|NP_376178.1| - 1.5e-15 57.7 6.2 1.5e-15 57.7 6.2 3.0 2 1 1 3 3 3 1 D5 N terminal like Prim-Pol PF09250.11 gi|15920509|ref|NP_376178.1| - 8.5e-12 45.7 0.0 1.4e-11 45.0 0.0 1.3 1 0 0 1 1 1 1 Bifunctional DNA primase/polymerase, N-terminal Pox_D5 PF03288.16 gi|15920509|ref|NP_376178.1| - 4.1e-07 30.4 0.5 5.3e-06 26.8 0.1 3.2 2 0 0 2 2 2 1 Poxvirus D5 protein-like RFX_DNA_binding PF02257.15 gi|15920509|ref|NP_376178.1| - 1.4e-06 28.8 0.1 3.6e-06 27.5 0.1 1.7 1 0 0 1 1 1 1 RFX DNA-binding domain SEFIR PF08357.11 gi|15920509|ref|NP_376178.1| - 0.098 12.9 0.5 1.7 8.9 0.1 2.6 2 0 0 2 2 2 0 SEFIR domain MMR_HSR1 PF01926.23 gi|15920509|ref|NP_376178.1| - 0.24 11.5 1.7 1.2 9.3 0.7 2.5 2 0 0 2 2 2 0 50S ribosome-binding GTPase zf-CCHH PF10283.9 gi|15920510|ref|NP_376179.1| - 0.053 13.5 0.6 0.083 12.9 0.6 1.3 1 0 0 1 1 1 0 PBZ domain HTH_11 PF08279.12 gi|15920512|ref|NP_376181.1| - 0.0013 18.6 0.2 0.0037 17.2 0.2 1.8 1 0 0 1 1 1 1 HTH domain SMC_ScpB PF04079.16 gi|15920512|ref|NP_376181.1| - 0.0014 18.3 0.3 0.0034 17.0 0.1 1.7 2 0 0 2 2 2 1 Segregation and condensation complex subunit ScpB HTH_Mga PF08280.11 gi|15920512|ref|NP_376181.1| - 0.0018 18.3 0.3 0.0055 16.7 0.3 1.8 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain Adeno_E3A PF05248.12 gi|15920512|ref|NP_376181.1| - 0.021 14.8 0.0 0.046 13.7 0.0 1.5 1 0 0 1 1 1 0 Adenovirus E3A Prenyltransf PF01255.19 gi|15920512|ref|NP_376181.1| - 0.48 9.9 1.8 7.2 6.1 0.1 2.3 2 0 0 2 2 2 0 Putative undecaprenyl diphosphate synthase SSV1_ORF_D-335 PF07935.11 gi|15920513|ref|NP_376182.1| - 7.4e-31 106.2 1.7 8.9e-31 106.0 1.7 1.1 1 0 0 1 1 1 1 ORF D-335-like protein ABC_tran PF00005.27 gi|15920514|ref|NP_376183.1| - 4e-42 144.0 0.0 3e-21 76.4 0.0 2.5 2 0 0 2 2 2 2 ABC transporter AAA_21 PF13304.6 gi|15920514|ref|NP_376183.1| - 1.6e-14 54.5 7.0 0.0017 18.3 0.2 4.3 2 2 1 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|15920514|ref|NP_376183.1| - 6e-13 48.7 6.9 1.4e-05 24.6 2.2 4.1 3 1 0 3 3 3 2 RecF/RecN/SMC N terminal domain RLI PF04068.15 gi|15920514|ref|NP_376183.1| - 3.6e-12 45.9 0.9 3.6e-12 45.9 0.9 1.8 2 0 0 2 2 1 1 Possible Fer4-like domain in RNase L inhibitor, RLI Fer4 PF00037.27 gi|15920514|ref|NP_376183.1| - 8.5e-07 28.5 6.3 8.5e-07 28.5 6.3 2.6 3 0 0 3 3 2 1 4Fe-4S binding domain MMR_HSR1 PF01926.23 gi|15920514|ref|NP_376183.1| - 7.7e-06 26.0 0.0 0.28 11.3 0.0 3.1 2 1 0 2 2 2 2 50S ribosome-binding GTPase Fer4_10 PF13237.6 gi|15920514|ref|NP_376183.1| - 2.2e-05 24.5 8.3 0.00066 19.7 1.1 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain AAA_15 PF13175.6 gi|15920514|ref|NP_376183.1| - 2.5e-05 24.2 2.3 0.17 11.6 1.9 2.9 3 1 0 3 3 3 2 AAA ATPase domain AAA_23 PF13476.6 gi|15920514|ref|NP_376183.1| - 2.6e-05 24.8 4.9 0.053 14.0 0.2 2.5 2 1 0 2 2 2 2 AAA domain AAA_24 PF13479.6 gi|15920514|ref|NP_376183.1| - 0.00013 21.8 0.1 0.017 14.8 0.0 2.4 2 0 0 2 2 2 1 AAA domain Fer4_21 PF14697.6 gi|15920514|ref|NP_376183.1| - 0.00035 20.6 7.5 0.00064 19.8 7.5 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain AAA_18 PF13238.6 gi|15920514|ref|NP_376183.1| - 0.00039 21.0 0.2 1.7 9.2 0.0 3.2 2 1 1 3 3 2 2 AAA domain Fer4_2 PF12797.7 gi|15920514|ref|NP_376183.1| - 0.00067 19.6 1.2 0.00067 19.6 1.2 2.4 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_6 PF12837.7 gi|15920514|ref|NP_376183.1| - 0.0011 18.9 12.4 0.0017 18.3 3.2 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain RNA_helicase PF00910.22 gi|15920514|ref|NP_376183.1| - 0.0013 19.1 0.0 0.61 10.5 0.0 2.6 2 0 0 2 2 2 1 RNA helicase Fer4_9 PF13187.6 gi|15920514|ref|NP_376183.1| - 0.0018 18.4 6.7 0.0032 17.6 6.7 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain AAA_16 PF13191.6 gi|15920514|ref|NP_376183.1| - 0.0021 18.5 0.0 0.3 11.5 0.0 2.5 2 0 0 2 2 2 1 AAA ATPase domain Fer4_7 PF12838.7 gi|15920514|ref|NP_376183.1| - 0.0021 18.6 1.2 0.0021 18.6 1.2 2.0 1 1 2 3 3 3 2 4Fe-4S dicluster domain Rad17 PF03215.15 gi|15920514|ref|NP_376183.1| - 0.0033 17.4 0.0 1.9 8.4 0.0 2.5 2 1 0 2 2 2 1 Rad17 P-loop domain AAA_29 PF13555.6 gi|15920514|ref|NP_376183.1| - 0.0051 16.5 1.8 1.8 8.4 0.2 2.4 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA PF00004.29 gi|15920514|ref|NP_376183.1| - 0.0052 17.2 0.0 0.27 11.7 0.0 2.6 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 gi|15920514|ref|NP_376183.1| - 0.0078 16.1 0.1 1.2 9.0 0.0 3.1 3 0 0 3 3 3 1 RsgA GTPase AAA_14 PF13173.6 gi|15920514|ref|NP_376183.1| - 0.016 15.2 5.1 2.8 8.0 0.1 3.5 3 1 1 4 4 3 0 AAA domain AAA_33 PF13671.6 gi|15920514|ref|NP_376183.1| - 0.018 15.2 0.0 0.25 11.5 0.0 2.6 2 1 0 2 2 2 0 AAA domain AAA_28 PF13521.6 gi|15920514|ref|NP_376183.1| - 0.02 15.2 0.0 4.5 7.5 0.0 2.6 2 0 0 2 2 2 0 AAA domain Fer4_16 PF13484.6 gi|15920514|ref|NP_376183.1| - 0.023 15.6 0.7 0.023 15.6 0.7 2.4 2 0 0 2 2 2 0 4Fe-4S double cluster binding domain PRK PF00485.18 gi|15920514|ref|NP_376183.1| - 0.023 14.4 0.1 2.6 7.7 0.1 2.3 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family NACHT PF05729.12 gi|15920514|ref|NP_376183.1| - 0.034 14.1 0.2 0.18 11.7 0.0 2.3 3 0 0 3 3 3 0 NACHT domain CLP1_P PF16575.5 gi|15920514|ref|NP_376183.1| - 0.043 13.6 0.0 7.3 6.3 0.0 2.4 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop MobB PF03205.14 gi|15920514|ref|NP_376183.1| - 0.055 13.4 0.3 0.99 9.3 0.1 2.3 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B Dynamin_N PF00350.23 gi|15920514|ref|NP_376183.1| - 0.058 13.5 0.0 2.6 8.1 0.0 2.4 2 0 0 2 2 2 0 Dynamin family AAA_22 PF13401.6 gi|15920514|ref|NP_376183.1| - 0.084 13.2 0.0 1.5 9.1 0.0 2.7 2 0 0 2 2 2 0 AAA domain AAA_13 PF13166.6 gi|15920514|ref|NP_376183.1| - 0.13 10.8 0.1 22 3.5 0.0 3.1 3 0 0 3 3 3 0 AAA domain Spore_IV_A PF09547.10 gi|15920514|ref|NP_376183.1| - 0.17 10.8 0.8 3.4 6.5 0.0 2.1 2 0 0 2 2 2 0 Stage IV sporulation protein A (spore_IV_A) AAA_30 PF13604.6 gi|15920514|ref|NP_376183.1| - 0.17 11.5 0.2 1.3 8.7 0.0 2.4 2 1 0 2 2 2 0 AAA domain Fer4_8 PF13183.6 gi|15920514|ref|NP_376183.1| - 0.18 12.3 0.2 0.18 12.3 0.2 1.9 2 0 0 2 2 1 0 4Fe-4S dicluster domain T2SSE PF00437.20 gi|15920514|ref|NP_376183.1| - 0.34 9.9 1.1 2.7 7.0 0.1 2.4 2 1 0 2 2 2 0 Type II/IV secretion system protein RecA PF00154.21 gi|15920514|ref|NP_376183.1| - 0.46 9.9 1.7 16 4.9 0.1 2.4 2 0 0 2 2 2 0 recA bacterial DNA recombination protein NB-ARC PF00931.22 gi|15920514|ref|NP_376183.1| - 0.51 9.5 1.9 1.4 8.1 0.2 2.3 2 0 0 2 2 2 0 NB-ARC domain Fer4_17 PF13534.6 gi|15920514|ref|NP_376183.1| - 0.64 10.6 5.5 0.16 12.5 1.1 2.0 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15920514|ref|NP_376183.1| - 6.8 7.5 11.6 0.3 11.7 3.2 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain FBPase_3 PF01950.16 gi|15920515|ref|NP_376184.1| - 2.7e-181 602.5 0.0 3.1e-181 602.4 0.0 1.0 1 0 0 1 1 1 1 Fructose-1,6-bisphosphatase Ribosomal_S17e PF00833.18 gi|15920516|ref|NP_376185.1| - 9.5e-15 54.6 2.6 1.1e-14 54.4 2.6 1.0 1 0 0 1 1 1 1 Ribosomal S17 PNPase PF03726.14 gi|15920516|ref|NP_376185.1| - 0.32 11.5 3.7 0.34 11.4 0.6 2.0 1 1 1 2 2 2 0 Polyribonucleotide nucleotidyltransferase, RNA binding domain DUF87 PF01935.17 gi|15920518|ref|NP_376187.1| - 1.2e-36 127.0 0.7 1.2e-36 127.0 0.7 1.7 2 0 0 2 2 2 1 Helicase HerA, central domain TrwB_AAD_bind PF10412.9 gi|15920518|ref|NP_376187.1| - 6e-09 35.3 0.0 2.2e-06 26.8 0.0 2.1 2 0 0 2 2 2 2 Type IV secretion-system coupling protein DNA-binding domain DUF853 PF05872.12 gi|15920518|ref|NP_376187.1| - 2.5e-07 29.7 0.0 0.0051 15.5 0.0 2.1 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) AAA_10 PF12846.7 gi|15920518|ref|NP_376187.1| - 0.0001 21.4 0.6 0.13 11.1 0.1 2.2 2 0 0 2 2 2 2 AAA-like domain T4SS-DNA_transf PF02534.14 gi|15920518|ref|NP_376187.1| - 0.00035 19.5 0.0 0.0011 17.8 0.0 1.7 2 0 0 2 2 2 1 Type IV secretory system Conjugative DNA transfer Zot PF05707.12 gi|15920518|ref|NP_376187.1| - 0.002 17.8 0.4 0.0045 16.6 0.1 1.7 2 0 0 2 2 2 1 Zonular occludens toxin (Zot) Zeta_toxin PF06414.12 gi|15920518|ref|NP_376187.1| - 0.0072 15.6 0.0 0.013 14.8 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin AAA_22 PF13401.6 gi|15920518|ref|NP_376187.1| - 0.015 15.6 0.0 4.8 7.4 0.0 2.4 2 0 0 2 2 2 0 AAA domain CbiA PF01656.23 gi|15920518|ref|NP_376187.1| - 0.015 15.3 0.0 0.034 14.2 0.0 1.7 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain DEAD PF00270.29 gi|15920518|ref|NP_376187.1| - 0.024 14.4 0.6 2.6 7.8 0.8 2.2 2 0 0 2 2 2 0 DEAD/DEAH box helicase Torsin PF06309.11 gi|15920518|ref|NP_376187.1| - 0.031 14.4 0.1 0.091 12.9 0.1 1.7 1 0 0 1 1 1 0 Torsin RSS_P20 PF11757.8 gi|15920518|ref|NP_376187.1| - 0.065 13.7 2.0 0.19 12.2 2.0 1.8 1 0 0 1 1 1 0 Suppressor of RNA silencing P21-like N-terminal domain IKKbetaNEMObind PF12179.8 gi|15920518|ref|NP_376187.1| - 0.084 12.9 0.0 0.23 11.5 0.0 1.7 1 0 0 1 1 1 0 I-kappa-kinase-beta NEMO binding domain ABC_tran PF00005.27 gi|15920518|ref|NP_376187.1| - 0.096 13.2 0.1 0.39 11.2 0.0 2.0 2 0 0 2 2 2 0 ABC transporter Cpn60_TCP1 PF00118.24 gi|15920519|ref|NP_376188.1| - 1.2e-177 591.5 15.1 1.4e-177 591.3 15.1 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family ACCA PF03255.14 gi|15920519|ref|NP_376188.1| - 0.017 15.0 0.1 0.05 13.5 0.1 1.8 1 0 0 1 1 1 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit TF_Zn_Ribbon PF08271.12 gi|15920520|ref|NP_376189.1| - 4.9e-13 48.4 2.1 9.9e-13 47.4 2.1 1.5 1 0 0 1 1 1 1 TFIIB zinc-binding Ribosomal_S27e PF01667.17 gi|15920520|ref|NP_376189.1| - 0.0014 18.3 0.2 0.0029 17.3 0.2 1.6 1 0 0 1 1 1 1 Ribosomal protein S27 A2L_zn_ribbon PF08792.10 gi|15920520|ref|NP_376189.1| - 0.0056 16.4 2.9 0.01 15.5 2.9 1.5 1 0 0 1 1 1 1 A2L zinc ribbon domain zf-RRN7 PF11781.8 gi|15920520|ref|NP_376189.1| - 0.015 15.0 0.4 0.024 14.3 0.4 1.3 1 0 0 1 1 1 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Zn_Tnp_IS1595 PF12760.7 gi|15920520|ref|NP_376189.1| - 0.083 12.9 0.4 0.15 12.1 0.4 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|15920520|ref|NP_376189.1| - 0.16 11.5 2.8 5.6 6.5 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain PhnA_Zn_Ribbon PF08274.12 gi|15920520|ref|NP_376189.1| - 1.8 8.6 5.3 4.2 7.4 5.3 1.6 1 1 0 1 1 1 0 PhnA Zinc-Ribbon tRNA_int_endo PF01974.17 gi|15920521|ref|NP_376190.1| - 1.3e-07 31.6 0.1 1.6e-07 31.3 0.1 1.3 1 1 0 1 1 1 1 tRNA intron endonuclease, catalytic C-terminal domain Sen15 PF09631.10 gi|15920521|ref|NP_376190.1| - 0.00017 21.8 0.1 0.00019 21.7 0.1 1.1 1 0 0 1 1 1 1 Sen15 protein TLC PF03219.14 gi|15920521|ref|NP_376190.1| - 0.017 13.9 0.0 0.019 13.7 0.0 1.0 1 0 0 1 1 1 0 TLC ATP/ADP transporter tRNA-synt_His PF13393.6 gi|15920522|ref|NP_376191.1| - 3.2e-66 223.7 0.0 3.9e-66 223.4 0.0 1.1 1 0 0 1 1 1 1 Histidyl-tRNA synthetase HGTP_anticodon PF03129.20 gi|15920522|ref|NP_376191.1| - 1.9e-13 50.4 0.3 4.4e-13 49.2 0.3 1.7 1 0 0 1 1 1 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|15920522|ref|NP_376191.1| - 1.9e-11 44.3 0.0 1.1e-10 41.8 0.0 2.1 1 1 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) tRNA-synt_2d PF01409.20 gi|15920522|ref|NP_376191.1| - 6e-07 29.2 0.0 6.8e-06 25.7 0.0 2.1 2 0 0 2 2 2 1 tRNA synthetases class II core domain (F) HGTP_anticodon2 PF12745.7 gi|15920522|ref|NP_376191.1| - 2.2e-06 27.4 0.5 3e-06 26.9 0.5 1.2 1 0 0 1 1 1 1 Anticodon binding domain of tRNAs tRNA-synt_2 PF00152.20 gi|15920522|ref|NP_376191.1| - 0.095 11.8 0.2 13 4.7 0.1 2.6 2 1 0 2 2 2 0 tRNA synthetases class II (D, K and N) Proteasome PF00227.26 gi|15920523|ref|NP_376192.1| - 9.3e-50 168.8 0.0 1.1e-49 168.5 0.0 1.0 1 0 0 1 1 1 1 Proteasome subunit RNA_pol_RpbG PF16992.5 gi|15920524|ref|NP_376193.1| - 2.2e-49 166.5 3.4 2.4e-49 166.3 3.4 1.0 1 0 0 1 1 1 1 DNA-directed RNA polymerase, subunit G DUF3373 PF11853.8 gi|15920524|ref|NP_376193.1| - 0.075 12.1 0.0 0.72 8.9 0.0 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF3373) Lsm_C PF14894.6 gi|15920525|ref|NP_376194.1| - 1.1e-30 105.2 0.2 1.9e-30 104.4 0.2 1.4 1 0 0 1 1 1 1 Lsm C-terminal LSM PF01423.22 gi|15920525|ref|NP_376194.1| - 0.00073 19.2 0.5 0.0044 16.7 0.5 2.1 1 1 0 1 1 1 1 LSM domain Imm48 PF15574.6 gi|15920525|ref|NP_376194.1| - 0.083 12.7 0.0 0.13 12.0 0.0 1.2 1 0 0 1 1 1 0 Immunity protein 48 TGT PF01702.18 gi|15920526|ref|NP_376195.1| - 3.6e-64 217.1 0.0 4.8e-64 216.7 0.0 1.1 1 0 0 1 1 1 1 Queuine tRNA-ribosyltransferase DUF5591 PF17884.1 gi|15920526|ref|NP_376195.1| - 0.023 14.6 0.1 0.059 13.2 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF5591) PAC2 PF09754.9 gi|15920527|ref|NP_376196.1| - 1.3e-34 120.1 0.0 1.5e-34 119.9 0.0 1.0 1 0 0 1 1 1 1 PAC2 family TGT_C2 PF14810.6 gi|15920528|ref|NP_376197.1| - 5.9e-19 68.0 0.0 2.4e-18 66.0 0.0 1.9 2 0 0 2 2 2 1 Patch-forming domain C2 of tRNA-guanine transglycosylase PUA PF01472.20 gi|15920528|ref|NP_376197.1| - 2.6e-18 65.7 0.3 3.8e-18 65.2 0.3 1.3 1 0 0 1 1 1 1 PUA domain UPF0113 PF03657.13 gi|15920528|ref|NP_376197.1| - 0.0017 18.6 0.1 0.0037 17.5 0.1 1.6 1 0 0 1 1 1 1 UPF0113 PUA domain PUA_3 PF17785.1 gi|15920528|ref|NP_376197.1| - 0.14 12.0 0.1 0.85 9.5 0.0 2.0 2 0 0 2 2 2 0 PUA-like domain AAA PF00004.29 gi|15920529|ref|NP_376198.1| - 1.8e-29 102.9 0.1 3e-29 102.1 0.1 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|15920529|ref|NP_376198.1| - 6e-14 51.6 0.0 1.8e-13 50.1 0.0 1.8 1 0 0 1 1 1 1 AAA+ lid domain AAA_2 PF07724.14 gi|15920529|ref|NP_376198.1| - 0.0034 17.5 0.4 0.0065 16.6 0.1 1.6 2 0 0 2 2 2 1 AAA domain (Cdc48 subfamily) CBFD_NFYB_HMF PF00808.23 gi|15920529|ref|NP_376198.1| - 0.074 13.4 0.2 5.2 7.4 0.0 2.3 2 0 0 2 2 2 0 Histone-like transcription factor (CBF/NF-Y) and archaeal histone TFIID-18kDa PF02269.16 gi|15920529|ref|NP_376198.1| - 0.093 12.8 0.0 0.17 11.9 0.0 1.4 1 0 0 1 1 1 0 Transcription initiation factor IID, 18kD subunit HTH_3 PF01381.22 gi|15920530|ref|NP_376199.1| - 2.1e-12 46.9 1.6 3.5e-12 46.2 1.6 1.4 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|15920530|ref|NP_376199.1| - 7.8e-10 39.0 0.0 1.2e-09 38.4 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|15920530|ref|NP_376199.1| - 3.1e-07 30.2 0.3 6.2e-07 29.2 0.3 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|15920530|ref|NP_376199.1| - 2e-06 27.7 0.7 6.9e-06 26.0 0.7 1.9 1 0 0 1 1 1 1 Helix-turn-helix domain MqsA_antitoxin PF15731.5 gi|15920530|ref|NP_376199.1| - 0.00015 21.9 4.2 0.00082 19.5 4.0 1.9 1 1 0 1 1 1 1 Antitoxin component of bacterial toxin-antitoxin system, MqsA HTH_37 PF13744.6 gi|15920530|ref|NP_376199.1| - 0.0017 18.2 0.9 0.0054 16.7 0.8 1.9 1 1 1 2 2 2 1 Helix-turn-helix domain RPA_C PF08784.11 gi|15920530|ref|NP_376199.1| - 0.0034 18.0 0.1 0.0053 17.4 0.1 1.3 1 0 0 1 1 1 1 Replication protein A C terminal HTH_11 PF08279.12 gi|15920530|ref|NP_376199.1| - 0.0052 16.7 0.4 0.026 14.5 0.1 2.2 2 0 0 2 2 2 1 HTH domain DZR PF12773.7 gi|15920530|ref|NP_376199.1| - 0.0082 16.1 0.2 0.015 15.3 0.2 1.3 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|15920530|ref|NP_376199.1| - 0.016 14.9 0.5 0.75 9.6 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain HTH_26 PF13443.6 gi|15920530|ref|NP_376199.1| - 0.02 15.3 0.9 0.046 14.2 0.2 1.9 2 0 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain DUF3861 PF12977.7 gi|15920530|ref|NP_376199.1| - 0.025 14.8 0.8 0.15 12.2 0.2 2.0 1 1 1 2 2 2 0 Domain of Unknown Function with PDB structure (DUF3861) Sigma70_r4 PF04545.16 gi|15920530|ref|NP_376199.1| - 0.034 13.7 0.1 0.072 12.6 0.1 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_23 PF13384.6 gi|15920530|ref|NP_376199.1| - 0.1 12.4 0.2 0.24 11.2 0.2 1.7 1 1 0 1 1 1 0 Homeodomain-like domain FOXP-CC PF16159.5 gi|15920530|ref|NP_376199.1| - 0.14 12.8 0.9 1.7 9.3 0.2 2.2 2 0 0 2 2 2 0 FOXP coiled-coil domain PIN_2 PF10130.9 gi|15920530|ref|NP_376199.1| - 0.95 9.7 3.5 4.2 7.6 0.5 1.9 1 1 1 2 2 2 0 PIN domain ABC_tran_Xtn PF12848.7 gi|15920530|ref|NP_376199.1| - 1.1 9.3 8.0 0.064 13.3 1.5 1.9 2 0 0 2 2 2 0 ABC transporter MMR_HSR1 PF01926.23 gi|15920531|ref|NP_376200.1| - 6.9e-20 71.2 0.4 1.6e-19 70.1 0.0 1.8 2 0 0 2 2 2 1 50S ribosome-binding GTPase GTP-bdg_M PF16360.5 gi|15920531|ref|NP_376200.1| - 2.4e-18 66.5 2.7 4.4e-18 65.7 2.7 1.4 1 0 0 1 1 1 1 GTP-binding GTPase Middle Region GTP-bdg_N PF13167.6 gi|15920531|ref|NP_376200.1| - 4e-12 46.6 0.3 1.2e-11 45.1 0.3 1.9 1 0 0 1 1 1 1 GTP-binding GTPase N-terminal FeoB_N PF02421.18 gi|15920531|ref|NP_376200.1| - 1.8e-11 43.8 2.1 1.8e-11 43.8 2.1 1.9 2 1 0 2 2 2 1 Ferrous iron transport protein B GTP_EFTU PF00009.27 gi|15920531|ref|NP_376200.1| - 1.6e-07 31.1 0.7 6.9e-05 22.5 0.1 2.5 1 1 1 2 2 2 2 Elongation factor Tu GTP binding domain Arf PF00025.21 gi|15920531|ref|NP_376200.1| - 5.2e-06 26.0 2.1 2.4e-05 23.9 1.6 2.3 1 1 1 2 2 2 1 ADP-ribosylation factor family SRPRB PF09439.10 gi|15920531|ref|NP_376200.1| - 1.2e-05 24.9 0.7 1.9e-05 24.2 0.3 1.6 1 1 0 1 1 1 1 Signal recognition particle receptor beta subunit RsgA_GTPase PF03193.16 gi|15920531|ref|NP_376200.1| - 0.00011 22.2 1.3 0.25 11.2 0.4 2.5 2 0 0 2 2 2 2 RsgA GTPase Dynamin_N PF00350.23 gi|15920531|ref|NP_376200.1| - 0.0019 18.3 0.1 0.14 12.2 0.0 2.8 1 1 1 2 2 2 1 Dynamin family MMR_HSR1_Xtn PF16897.5 gi|15920531|ref|NP_376200.1| - 0.0022 18.0 0.2 0.0079 16.2 0.2 2.0 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain CbiA PF01656.23 gi|15920531|ref|NP_376200.1| - 0.0066 16.5 1.7 0.038 14.1 1.7 2.4 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain NOG1 PF06858.14 gi|15920531|ref|NP_376200.1| - 0.0094 15.7 0.1 0.22 11.3 0.0 2.7 2 0 0 2 2 2 1 Nucleolar GTP-binding protein 1 (NOG1) TniB PF05621.11 gi|15920531|ref|NP_376200.1| - 0.01 15.3 0.7 0.12 11.8 0.0 2.3 2 0 0 2 2 2 0 Bacterial TniB protein ABC_tran PF00005.27 gi|15920531|ref|NP_376200.1| - 0.012 16.1 0.2 0.042 14.4 0.0 1.9 1 1 1 2 2 2 0 ABC transporter Roc PF08477.13 gi|15920531|ref|NP_376200.1| - 0.026 14.7 0.0 0.31 11.3 0.0 2.4 1 1 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase DUF2774 PF11242.8 gi|15920531|ref|NP_376200.1| - 0.032 14.4 0.0 0.13 12.5 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF2774) cobW PF02492.19 gi|15920531|ref|NP_376200.1| - 0.11 12.1 0.4 15 5.1 0.1 2.5 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain Trm56 PF01994.16 gi|15920532|ref|NP_376201.1| - 1.3e-50 170.3 0.2 1.5e-50 170.1 0.2 1.0 1 0 0 1 1 1 1 tRNA ribose 2'-O-methyltransferase, aTrm56 TFIIE_alpha PF02002.17 gi|15920533|ref|NP_376202.1| - 1.3e-18 66.8 7.9 1.3e-18 66.8 7.9 1.9 2 0 0 2 2 2 1 TFIIE alpha subunit IF2_N PF04760.15 gi|15920533|ref|NP_376202.1| - 0.013 15.3 0.8 0.1 12.4 0.1 2.4 2 0 0 2 2 2 0 Translation initiation factor IF-2, N-terminal region HTH_9 PF08221.11 gi|15920533|ref|NP_376202.1| - 0.013 15.5 0.1 0.027 14.6 0.0 1.6 2 0 0 2 2 2 0 RNA polymerase III subunit RPC82 helix-turn-helix domain TrmB PF01978.19 gi|15920533|ref|NP_376202.1| - 0.018 14.9 0.0 0.039 13.8 0.0 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB zf-Mss51 PF13824.6 gi|15920533|ref|NP_376202.1| - 0.022 14.8 0.1 0.054 13.6 0.1 1.8 1 0 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 DNA_ligase_ZBD PF03119.16 gi|15920533|ref|NP_376202.1| - 0.026 14.5 0.4 0.13 12.3 0.1 2.1 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain Zn_Tnp_IS1595 PF12760.7 gi|15920533|ref|NP_376202.1| - 0.052 13.5 0.0 0.11 12.5 0.0 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain HTH_11 PF08279.12 gi|15920533|ref|NP_376202.1| - 0.058 13.3 0.4 0.058 13.3 0.4 1.7 2 0 0 2 2 2 0 HTH domain TF_Zn_Ribbon PF08271.12 gi|15920533|ref|NP_376202.1| - 0.065 12.8 0.2 0.17 11.4 0.2 1.8 1 0 0 1 1 1 0 TFIIB zinc-binding HTH_20 PF12840.7 gi|15920533|ref|NP_376202.1| - 0.073 13.1 0.0 0.22 11.6 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain zf-TFIIB PF13453.6 gi|15920533|ref|NP_376202.1| - 0.092 12.1 0.5 0.33 10.3 0.1 2.1 2 0 0 2 2 2 0 Transcription factor zinc-finger zf-ribbon_3 PF13248.6 gi|15920533|ref|NP_376202.1| - 0.18 11.2 0.3 0.18 11.2 0.3 1.9 2 0 0 2 2 2 0 zinc-ribbon domain Rad50_zn_hook PF04423.14 gi|15920533|ref|NP_376202.1| - 1.1 9.2 11.3 0.18 11.6 0.8 3.4 3 0 0 3 3 3 0 Rad50 zinc hook motif DNA_methylase PF00145.17 gi|15920534|ref|NP_376203.1| - 4.2e-54 184.1 0.0 6.1e-52 177.0 0.0 2.0 1 1 0 1 1 1 1 C-5 cytosine-specific DNA methylase Methyltransf_15 PF09445.10 gi|15920534|ref|NP_376203.1| - 7.3e-05 22.4 0.0 0.00012 21.6 0.0 1.4 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Met_10 PF02475.16 gi|15920534|ref|NP_376203.1| - 0.12 12.1 0.0 0.27 10.9 0.0 1.5 1 0 0 1 1 1 0 Met-10+ like-protein DUF1574 PF07611.11 gi|15920534|ref|NP_376203.1| - 0.14 11.5 0.4 0.32 10.3 0.4 1.6 1 1 0 1 1 1 0 Protein of unknown function (DUF1574) DUF2122 PF09895.9 gi|15920535|ref|NP_376204.1| - 5.4e-38 129.6 0.0 7.2e-38 129.2 0.0 1.2 1 0 0 1 1 1 1 RecB-family nuclease (DUF2122) SpoU_methylase PF00588.19 gi|15920535|ref|NP_376204.1| - 0.03 14.5 0.0 0.036 14.2 0.0 1.1 1 0 0 1 1 1 0 SpoU rRNA Methylase family Polbeta PF18765.1 gi|15920536|ref|NP_376205.1| - 1.6e-07 31.3 0.6 2.2e-07 30.8 0.6 1.3 1 1 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase NTP_transf_2 PF01909.23 gi|15920536|ref|NP_376205.1| - 0.00066 19.9 0.4 0.00089 19.5 0.4 1.4 1 1 0 1 1 1 1 Nucleotidyltransferase domain HEPN PF05168.14 gi|15920537|ref|NP_376206.1| - 1.3e-24 86.6 0.2 1.6e-24 86.3 0.2 1.0 1 0 0 1 1 1 1 HEPN domain MFS_1 PF07690.16 gi|15920538|ref|NP_376207.1| - 2.5e-27 95.7 40.4 8.1e-16 57.9 24.8 2.5 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|15920538|ref|NP_376207.1| - 2.3e-11 43.2 37.2 3.3e-10 39.4 17.2 2.8 2 1 0 2 2 2 2 Sugar (and other) transporter MFS_5 PF05631.14 gi|15920538|ref|NP_376207.1| - 0.0065 15.4 7.3 0.0065 15.4 7.3 2.1 2 0 0 2 2 2 1 Sugar-tranasporters, 12 TM MFS_3 PF05977.13 gi|15920538|ref|NP_376207.1| - 0.31 9.4 9.1 0.23 9.8 0.4 2.8 2 1 1 3 3 3 0 Transmembrane secretion effector ABC_cobalt PF09819.9 gi|15920540|ref|NP_376209.1| - 0.011 15.8 2.8 0.011 15.8 2.8 1.6 2 0 0 2 2 2 0 ABC-type cobalt transport system, permease component AdoHcyase PF05221.17 gi|15920541|ref|NP_376210.1| - 1.5e-75 254.1 0.0 1.8e-45 155.4 0.0 2.0 1 1 1 2 2 2 2 S-adenosyl-L-homocysteine hydrolase AdoHcyase_NAD PF00670.21 gi|15920541|ref|NP_376210.1| - 1.1e-57 194.7 0.3 1.9e-57 193.8 0.3 1.4 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|15920541|ref|NP_376210.1| - 5.3e-08 32.4 0.4 1.2e-07 31.3 0.4 1.6 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 gi|15920541|ref|NP_376210.1| - 4.3e-06 26.4 0.2 8.8e-06 25.4 0.2 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain TrkA_N PF02254.18 gi|15920541|ref|NP_376210.1| - 0.0012 19.0 0.0 0.0026 18.0 0.0 1.5 1 0 0 1 1 1 1 TrkA-N domain Oxidored_nitro PF00148.19 gi|15920541|ref|NP_376210.1| - 0.0038 16.0 0.8 0.028 13.2 0.1 2.1 2 0 0 2 2 2 1 Nitrogenase component 1 type Oxidoreductase THF_DHG_CYH_C PF02882.19 gi|15920541|ref|NP_376210.1| - 0.012 15.0 0.7 0.085 12.2 0.7 2.0 1 1 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 3HCDH_N PF02737.18 gi|15920541|ref|NP_376210.1| - 0.066 13.1 1.4 0.13 12.2 0.5 1.9 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Peptidase_M35 PF02102.15 gi|15920541|ref|NP_376210.1| - 0.086 11.7 0.0 0.13 11.1 0.0 1.2 1 0 0 1 1 1 0 Deuterolysin metalloprotease (M35) family SSV1_ORF_D-335 PF07935.11 gi|15920542|ref|NP_376211.1| - 3.6e-31 107.3 1.7 4.2e-31 107.0 1.7 1.1 1 0 0 1 1 1 1 ORF D-335-like protein Beta-Casp PF10996.8 gi|15920543|ref|NP_376212.1| - 4.2e-24 85.0 0.0 1.5e-23 83.2 0.0 1.9 2 0 0 2 2 2 1 Beta-Casp domain KH_7 PF17214.3 gi|15920543|ref|NP_376212.1| - 1.6e-23 82.4 8.3 6.5e-21 74.1 1.5 2.9 1 1 1 2 2 2 2 KH domain RMMBL PF07521.12 gi|15920543|ref|NP_376212.1| - 6.8e-16 58.0 0.0 8.9e-15 54.4 0.0 2.5 2 0 0 2 2 2 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_6 PF16661.5 gi|15920543|ref|NP_376212.1| - 7.3e-15 54.9 0.0 3.3e-14 52.8 0.0 2.0 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|15920543|ref|NP_376212.1| - 1.3e-13 51.4 0.9 8.5e-13 48.8 0.9 2.1 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|15920543|ref|NP_376212.1| - 6.5e-12 45.4 0.2 1.4e-11 44.3 0.2 1.5 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|15920543|ref|NP_376212.1| - 8.4e-05 22.5 0.0 0.00049 20.0 0.0 2.1 2 0 0 2 2 2 1 Beta-lactamase superfamily domain KH_2 PF07650.17 gi|15920543|ref|NP_376212.1| - 0.016 15.0 1.3 0.016 15.0 1.3 3.4 1 1 1 2 2 2 0 KH domain Methyltransf_2 PF00891.18 gi|15920543|ref|NP_376212.1| - 0.041 13.2 0.0 0.079 12.2 0.0 1.4 1 0 0 1 1 1 0 O-methyltransferase domain Fe-ADH_2 PF13685.6 gi|15920544|ref|NP_376213.1| - 1.1e-65 221.8 0.2 1.4e-65 221.5 0.2 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.19 gi|15920544|ref|NP_376213.1| - 8.9e-24 84.0 1.9 1.6e-22 79.9 1.9 2.0 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase DHQ_synthase PF01761.20 gi|15920544|ref|NP_376213.1| - 8.2e-13 48.1 0.2 5.3e-07 29.1 0.0 2.5 2 1 0 2 2 2 2 3-dehydroquinate synthase HHH_4 PF14490.6 gi|15920544|ref|NP_376213.1| - 0.11 12.5 0.1 35 4.5 0.0 3.2 3 0 0 3 3 3 0 Helix-hairpin-helix containing domain FKBP_C PF00254.28 gi|15920545|ref|NP_376214.1| - 1.5e-16 60.5 0.1 4.3e-16 59.0 0.1 1.8 2 1 0 2 2 2 1 FKBP-type peptidyl-prolyl cis-trans isomerase FKBP26_C PF18046.1 gi|15920545|ref|NP_376214.1| - 1.1e-11 44.7 0.6 2.2e-11 43.7 0.6 1.5 1 0 0 1 1 1 1 FKBP26_C-terminal Ribosomal_L37e PF01907.19 gi|15920546|ref|NP_376215.1| - 5.7e-26 90.4 9.0 6.3e-26 90.3 9.0 1.0 1 0 0 1 1 1 1 Ribosomal protein L37e Ephrin_rec_like PF07699.13 gi|15920546|ref|NP_376215.1| - 0.0078 16.0 0.7 0.01 15.5 0.7 1.3 1 0 0 1 1 1 1 Putative ephrin-receptor like HypA PF01155.19 gi|15920546|ref|NP_376215.1| - 0.024 14.6 0.4 0.026 14.6 0.4 1.1 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Ribosomal_L32p PF01783.23 gi|15920546|ref|NP_376215.1| - 0.36 11.1 5.9 0.36 11.1 4.4 1.7 1 1 1 2 2 2 0 Ribosomal L32p protein family Spermine_synth PF01564.17 gi|15920547|ref|NP_376216.1| - 1.3e-47 161.7 0.1 1.8e-47 161.2 0.1 1.2 1 0 0 1 1 1 1 Spermine/spermidine synthase domain Spermine_synt_N PF17284.2 gi|15920547|ref|NP_376216.1| - 8.3e-10 38.4 0.0 1.7e-09 37.4 0.0 1.5 1 0 0 1 1 1 1 Spermidine synthase tetramerisation domain Methyltransf_25 PF13649.6 gi|15920547|ref|NP_376216.1| - 1e-06 29.3 0.0 1.9e-06 28.5 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|15920547|ref|NP_376216.1| - 6.9e-06 26.7 0.0 1.5e-05 25.6 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|15920547|ref|NP_376216.1| - 0.00076 20.1 0.0 0.0014 19.2 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_2 PF00891.18 gi|15920547|ref|NP_376216.1| - 0.0068 15.7 0.0 0.013 14.8 0.0 1.5 1 0 0 1 1 1 1 O-methyltransferase domain Methyltransf_30 PF05430.11 gi|15920547|ref|NP_376216.1| - 0.013 15.3 0.0 0.027 14.4 0.0 1.5 1 0 0 1 1 1 0 S-adenosyl-L-methionine-dependent methyltransferase Methyltransf_5 PF01795.19 gi|15920547|ref|NP_376216.1| - 0.015 14.8 0.0 0.024 14.2 0.0 1.2 1 0 0 1 1 1 0 MraW methylase family MTS PF05175.14 gi|15920547|ref|NP_376216.1| - 0.028 14.0 0.0 0.045 13.3 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain DUF43 PF01861.16 gi|15920547|ref|NP_376216.1| - 0.044 13.0 0.1 0.069 12.4 0.1 1.3 1 0 0 1 1 1 0 Branched-chain polyamine synthase A C-terminal domain RNase_J_C PF17770.1 gi|15920547|ref|NP_376216.1| - 0.061 14.4 0.2 0.34 12.0 0.0 2.4 2 1 0 2 2 2 0 Ribonuclease J C-terminal domain DUF3902 PF13042.6 gi|15920547|ref|NP_376216.1| - 0.11 12.1 0.1 0.23 11.0 0.1 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3902) Methyltransf_31 PF13847.6 gi|15920547|ref|NP_376216.1| - 0.11 12.3 0.0 0.15 11.9 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain NTP_transf_5 PF14907.6 gi|15920548|ref|NP_376217.1| - 0.078 12.6 0.0 0.35 10.4 0.0 1.8 2 0 0 2 2 2 0 Uncharacterised nucleotidyltransferase Molybdopterin PF00384.22 gi|15920549|ref|NP_376218.1| - 3.7e-75 253.5 0.0 4.5e-75 253.2 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 gi|15920549|ref|NP_376218.1| - 1.5e-23 82.9 0.0 2.7e-23 82.1 0.0 1.4 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain Molybdop_Fe4S4 PF04879.16 gi|15920549|ref|NP_376218.1| - 1.2e-15 57.2 0.4 2.3e-15 56.3 0.4 1.5 1 0 0 1 1 1 1 Molybdopterin oxidoreductase Fe4S4 domain DUF131 PF01998.17 gi|15920550|ref|NP_376219.1| - 8.1e-12 44.6 13.4 1.2e-11 44.1 11.5 1.9 1 1 1 2 2 2 1 Protein of unknown function DUF131 DUF2207 PF09972.9 gi|15920550|ref|NP_376219.1| - 0.26 10.0 10.2 0.3 9.8 10.2 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF2721 PF11026.8 gi|15920550|ref|NP_376219.1| - 1.5 8.7 7.3 6.2 6.7 7.3 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF2721) DUF202 PF02656.15 gi|15920550|ref|NP_376219.1| - 2.9 8.4 7.2 11 6.6 7.2 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF202) DUF308 PF03729.13 gi|15920550|ref|NP_376219.1| - 4.9 7.5 19.2 17 5.9 19.0 2.0 1 1 0 1 1 1 0 Short repeat of unknown function (DUF308) TFIIB PF00382.19 gi|15920551|ref|NP_376220.1| - 1.4e-35 121.1 4.1 2.8e-17 62.5 0.7 2.2 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|15920551|ref|NP_376220.1| - 3.9e-11 42.3 0.3 7.2e-11 41.4 0.3 1.4 1 0 0 1 1 1 1 TFIIB zinc-binding HTH_AsnC-type PF13404.6 gi|15920551|ref|NP_376220.1| - 2.2e-07 30.6 0.2 3.8e-05 23.4 0.1 2.8 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain Sigma70_r4 PF04545.16 gi|15920551|ref|NP_376220.1| - 2.7e-05 23.6 2.6 0.00047 19.6 0.2 3.7 4 0 0 4 4 4 1 Sigma-70, region 4 HTH_Tnp_ISL3 PF13542.6 gi|15920551|ref|NP_376220.1| - 0.00067 19.0 0.5 0.013 14.9 0.1 2.7 2 1 1 3 3 3 1 Helix-turn-helix domain of transposase family ISL3 Cyclin_C PF02984.19 gi|15920551|ref|NP_376220.1| - 0.00072 19.6 0.0 0.3 11.2 0.0 2.2 2 0 0 2 2 2 2 Cyclin, C-terminal domain HTH_24 PF13412.6 gi|15920551|ref|NP_376220.1| - 0.0016 18.0 0.6 0.0063 16.1 0.1 2.4 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding Sigma70_r4_2 PF08281.12 gi|15920551|ref|NP_376220.1| - 0.0016 18.1 0.4 0.009 15.7 0.0 2.5 3 0 0 3 3 3 1 Sigma-70, region 4 HTH_11 PF08279.12 gi|15920551|ref|NP_376220.1| - 0.0033 17.3 0.7 0.0077 16.1 0.2 1.8 2 0 0 2 2 2 1 HTH domain DUF3562 PF12085.8 gi|15920551|ref|NP_376220.1| - 0.0047 16.5 0.3 1.2 8.8 0.0 2.5 2 0 0 2 2 2 1 Protein of unknown function (DUF3562) RB_B PF01857.20 gi|15920551|ref|NP_376220.1| - 0.018 15.1 0.1 0.045 13.8 0.0 1.7 2 0 0 2 2 2 0 Retinoblastoma-associated protein B domain Cyclin_N PF00134.23 gi|15920551|ref|NP_376220.1| - 0.018 14.8 0.1 1.4 8.7 0.1 2.2 2 0 0 2 2 2 0 Cyclin, N-terminal domain HTH_Crp_2 PF13545.6 gi|15920551|ref|NP_376220.1| - 0.024 14.6 0.2 0.5 10.4 0.0 2.7 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_23 PF13384.6 gi|15920551|ref|NP_376220.1| - 0.03 14.1 0.1 0.03 14.1 0.1 3.6 3 1 1 4 4 4 0 Homeodomain-like domain SUI1 PF01253.22 gi|15920552|ref|NP_376221.1| - 1e-22 80.4 0.4 1.3e-22 80.1 0.4 1.1 1 0 0 1 1 1 1 Translation initiation factor SUI1 Img2 PF05046.14 gi|15920552|ref|NP_376221.1| - 0.00035 20.8 0.7 0.00059 20.1 0.6 1.4 1 1 0 1 1 1 1 Mitochondrial large subunit ribosomal protein (Img2) DNA_RNApol_7kD PF03604.13 gi|161751101|ref|NP_376222.2| - 2.3e-05 24.0 4.6 5.4e-05 22.8 4.6 1.6 1 1 0 1 1 1 1 DNA directed RNA polymerase, 7 kDa subunit Zn-ribbon_8 PF09723.10 gi|161751101|ref|NP_376222.2| - 0.00027 21.0 0.5 0.00037 20.5 0.5 1.2 1 0 0 1 1 1 1 Zinc ribbon domain DUF2072 PF09845.9 gi|161751101|ref|NP_376222.2| - 0.0022 18.3 0.2 0.0022 18.2 0.2 1.0 1 0 0 1 1 1 1 Zn-ribbon containing protein HypA PF01155.19 gi|161751101|ref|NP_376222.2| - 0.0054 16.7 0.1 0.0056 16.7 0.1 1.0 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-C2H2 PF00096.26 gi|161751101|ref|NP_376222.2| - 0.0084 16.5 1.3 2.1 9.0 0.1 2.2 2 0 0 2 2 2 2 Zinc finger, C2H2 type Zn_Tnp_IS1595 PF12760.7 gi|161751101|ref|NP_376222.2| - 0.016 15.2 2.4 0.04 13.9 0.0 2.0 2 0 0 2 2 2 0 Transposase zinc-ribbon domain zinc_ribbon_4 PF13717.6 gi|161751101|ref|NP_376222.2| - 0.037 14.0 2.4 0.82 9.6 2.4 2.4 1 1 0 1 1 1 0 zinc-ribbon domain DZR PF12773.7 gi|161751101|ref|NP_376222.2| - 0.055 13.5 0.8 0.2 11.7 0.8 1.8 1 1 0 1 1 1 0 Double zinc ribbon zinc_ribbon_2 PF13240.6 gi|161751101|ref|NP_376222.2| - 0.081 12.7 3.9 0.15 11.8 0.4 2.1 2 0 0 2 2 2 0 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|161751101|ref|NP_376222.2| - 0.093 12.2 0.7 0.093 12.2 0.7 2.1 2 0 0 2 2 2 0 zinc-ribbon domain zf-Di19 PF05605.12 gi|161751101|ref|NP_376222.2| - 0.14 12.5 0.4 3 8.2 0.1 2.0 2 0 0 2 2 2 0 Drought induced 19 protein (Di19), zinc-binding Cys_rich_CPXG PF14255.6 gi|161751101|ref|NP_376222.2| - 0.18 11.7 2.2 0.55 10.2 0.3 2.0 2 0 0 2 2 2 0 Cysteine-rich CPXCG OrfB_Zn_ribbon PF07282.11 gi|161751101|ref|NP_376222.2| - 0.27 11.2 1.9 3.8 7.5 0.0 2.0 1 1 1 2 2 2 0 Putative transposase DNA-binding domain Mu-like_Com PF10122.9 gi|161751101|ref|NP_376222.2| - 0.55 9.7 3.3 1.4 8.4 3.3 1.6 1 1 0 1 1 1 0 Mu-like prophage protein Com Arginase PF00491.21 gi|15920554|ref|NP_376223.1| - 1.3e-70 238.1 0.1 1.5e-70 237.9 0.1 1.0 1 0 0 1 1 1 1 Arginase family APS_kinase PF01583.20 gi|15920554|ref|NP_376223.1| - 0.08 12.8 0.0 0.21 11.5 0.0 1.6 2 0 0 2 2 2 0 Adenylylsulphate kinase HGTP_anticodon PF03129.20 gi|15920555|ref|NP_376224.1| - 1.1e-19 70.3 1.6 2.5e-19 69.2 0.1 2.2 2 1 0 2 2 2 1 Anticodon binding domain tRNA-synt_2b PF00587.25 gi|15920555|ref|NP_376224.1| - 1.6e-07 31.5 0.4 2.6e-06 27.5 0.0 2.6 2 1 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) Molydop_binding PF01568.21 gi|15920556|ref|NP_376225.1| - 6.1e-05 23.0 0.1 0.0089 16.0 0.0 2.2 1 1 1 2 2 2 2 Molydopterin dinucleotide binding domain CDC48_N PF02359.18 gi|15920556|ref|NP_376225.1| - 0.026 14.7 0.1 0.052 13.7 0.1 1.7 1 1 0 1 1 1 0 Cell division protein 48 (CDC48), N-terminal domain BCDHK_Adom3 PF10436.9 gi|15920557|ref|NP_376226.1| - 0.04 13.8 0.2 0.044 13.6 0.2 1.2 1 0 0 1 1 1 0 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase PhoU_div PF01865.16 gi|15920558|ref|NP_376227.1| - 1.3e-05 24.6 5.3 1.3e-05 24.6 5.3 2.1 1 1 1 2 2 2 1 Protein of unknown function DUF47 PhoU PF01895.19 gi|15920558|ref|NP_376227.1| - 0.0022 18.4 9.9 0.0074 16.7 3.2 2.7 2 1 0 2 2 2 2 PhoU domain HrpJ PF07201.11 gi|15920558|ref|NP_376227.1| - 0.0093 16.3 2.5 0.085 13.2 0.1 2.2 2 0 0 2 2 2 1 HrpJ-like domain LicD PF04991.13 gi|15920558|ref|NP_376227.1| - 0.051 13.7 5.4 0.065 13.4 5.4 1.1 1 0 0 1 1 1 0 LicD family tRNA_int_endo PF01974.17 gi|15920559|ref|NP_376228.1| - 1.9e-28 98.4 0.0 3.3e-28 97.6 0.0 1.4 1 0 0 1 1 1 1 tRNA intron endonuclease, catalytic C-terminal domain tRNA_int_endo_N PF02778.14 gi|15920559|ref|NP_376228.1| - 1.4e-21 76.0 0.7 2.6e-21 75.0 0.7 1.5 1 0 0 1 1 1 1 tRNA intron endonuclease, N-terminal domain Flavoprotein PF02441.19 gi|15920561|ref|NP_376230.1| - 6.5e-28 97.5 0.1 8.2e-28 97.1 0.1 1.1 1 0 0 1 1 1 1 Flavoprotein Thi4 PF01946.17 gi|15920562|ref|NP_376231.1| - 8.6e-82 273.9 3.7 1e-81 273.7 3.7 1.0 1 0 0 1 1 1 1 Thi4 family DAO PF01266.24 gi|15920562|ref|NP_376231.1| - 4.1e-14 52.9 5.6 9.2e-08 32.0 1.0 2.3 1 1 0 2 2 2 2 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|15920562|ref|NP_376231.1| - 4e-11 42.6 7.1 1.5e-06 27.6 1.6 3.0 3 0 0 3 3 3 3 FAD binding domain FAD_oxidored PF12831.7 gi|15920562|ref|NP_376231.1| - 4.6e-10 39.4 2.7 6e-10 39.1 2.7 1.1 1 0 0 1 1 1 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|15920562|ref|NP_376231.1| - 8.3e-10 38.8 0.5 3.4e-09 36.8 0.5 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|15920562|ref|NP_376231.1| - 5.4e-08 32.4 0.7 6.7e-08 32.1 0.7 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|15920562|ref|NP_376231.1| - 1.2e-06 28.1 0.0 1.7e-06 27.5 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.14 gi|15920562|ref|NP_376231.1| - 1e-05 24.5 0.4 1.3e-05 24.1 0.4 1.3 1 0 0 1 1 1 1 HI0933-like protein GIDA PF01134.22 gi|15920562|ref|NP_376231.1| - 5.6e-05 22.4 0.9 0.00011 21.4 0.9 1.5 1 0 0 1 1 1 1 Glucose inhibited division protein A Pyr_redox_3 PF13738.6 gi|15920562|ref|NP_376231.1| - 5.9e-05 22.5 0.0 0.00013 21.3 0.0 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|15920562|ref|NP_376231.1| - 0.00026 21.5 0.7 0.0012 19.3 0.7 2.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 gi|15920562|ref|NP_376231.1| - 0.0019 17.5 0.4 0.0047 16.3 0.1 1.8 1 1 1 2 2 2 1 Flavin containing amine oxidoreductase ThiF PF00899.21 gi|15920562|ref|NP_376231.1| - 0.0073 15.7 0.0 0.019 14.3 0.0 1.6 2 0 0 2 2 2 1 ThiF family Trp_halogenase PF04820.14 gi|15920562|ref|NP_376231.1| - 0.036 12.9 3.6 0.074 11.9 1.0 2.1 2 1 0 2 2 2 0 Tryptophan halogenase K_oxygenase PF13434.6 gi|15920562|ref|NP_376231.1| - 0.048 12.8 0.0 0.082 12.0 0.0 1.2 1 0 0 1 1 1 0 L-lysine 6-monooxygenase (NADPH-requiring) Lycopene_cycl PF05834.12 gi|15920562|ref|NP_376231.1| - 0.052 12.6 0.5 0.15 11.1 0.0 1.8 2 1 0 2 2 2 0 Lycopene cyclase protein GMC_oxred_N PF00732.19 gi|15920562|ref|NP_376231.1| - 0.054 12.9 0.3 0.14 11.5 0.0 1.7 2 0 0 2 2 2 0 GMC oxidoreductase NAD_binding_9 PF13454.6 gi|15920562|ref|NP_376231.1| - 0.22 11.5 1.7 0.32 11.0 0.3 1.9 2 0 0 2 2 2 0 FAD-NAD(P)-binding Ribosomal_S24e PF01282.19 gi|15920563|ref|NP_376232.1| - 2.3e-18 65.9 0.2 3.1e-18 65.5 0.2 1.2 1 0 0 1 1 1 1 Ribosomal protein S24e Ribosomal_S27 PF01599.19 gi|15920564|ref|NP_376233.1| - 6.3e-14 51.9 2.2 8.7e-14 51.4 2.2 1.2 1 0 0 1 1 1 1 Ribosomal protein S27a Zn_Tnp_IS1595 PF12760.7 gi|15920564|ref|NP_376233.1| - 0.00013 21.8 2.1 0.00017 21.5 2.1 1.2 1 0 0 1 1 1 1 Transposase zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|15920564|ref|NP_376233.1| - 0.00036 20.4 0.4 0.00038 20.3 0.4 1.2 1 0 0 1 1 1 1 Putative transposase DNA-binding domain RNA_POL_M_15KD PF02150.16 gi|15920564|ref|NP_376233.1| - 0.0044 16.9 0.2 0.01 15.7 0.2 1.6 1 1 0 1 1 1 1 RNA polymerases M/15 Kd subunit Zn_ribbon_SprT PF17283.2 gi|15920564|ref|NP_376233.1| - 0.0053 16.6 0.5 0.0077 16.1 0.5 1.3 1 0 0 1 1 1 1 SprT-like zinc ribbon domain FAM72 PF14976.6 gi|15920564|ref|NP_376233.1| - 0.031 14.4 0.6 0.04 14.1 0.6 1.3 1 1 0 1 1 1 0 FAM72 protein TackOD1 PF18551.1 gi|15920564|ref|NP_376233.1| - 0.032 13.9 0.2 0.032 13.9 0.2 1.2 1 0 0 1 1 1 0 Thaumarchaeal output domain 1 Lar_restr_allev PF14354.6 gi|15920564|ref|NP_376233.1| - 0.033 14.6 1.4 0.065 13.6 1.4 1.5 1 0 0 1 1 1 0 Restriction alleviation protein Lar Nudix_N_2 PF14803.6 gi|15920564|ref|NP_376233.1| - 0.034 14.1 2.2 0.14 12.1 2.2 2.0 1 1 0 1 1 1 0 Nudix N-terminal DUF1451 PF07295.11 gi|15920564|ref|NP_376233.1| - 0.035 14.1 0.3 0.037 14.0 0.3 1.1 1 0 0 1 1 1 0 Zinc-ribbon containing domain zf-piccolo PF05715.13 gi|15920564|ref|NP_376233.1| - 0.039 14.1 0.8 0.057 13.6 0.8 1.2 1 0 0 1 1 1 0 Piccolo Zn-finger GFA PF04828.14 gi|15920564|ref|NP_376233.1| - 0.05 13.9 1.0 3.8 7.9 0.1 2.1 1 1 1 2 2 2 0 Glutathione-dependent formaldehyde-activating enzyme zinc_ribbon_2 PF13240.6 gi|15920564|ref|NP_376233.1| - 0.053 13.3 5.3 0.22 11.3 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf_UBZ PF18439.1 gi|15920564|ref|NP_376233.1| - 0.074 12.7 2.3 0.32 10.6 0.1 2.1 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger FlhC PF05280.11 gi|15920564|ref|NP_376233.1| - 0.084 12.6 0.0 0.084 12.6 0.0 1.0 1 0 0 1 1 1 0 Flagellar transcriptional activator (FlhC) zf-tcix PF14952.6 gi|15920564|ref|NP_376233.1| - 0.22 11.2 0.5 0.22 11.2 0.5 2.3 2 0 0 2 2 2 0 Putative treble-clef, zinc-finger, Zn-binding UPF0547 PF10571.9 gi|15920564|ref|NP_376233.1| - 0.24 11.5 5.3 1.8 8.7 5.3 2.1 1 1 0 1 1 1 0 Uncharacterised protein family UPF0547 zf-ribbon_3 PF13248.6 gi|15920564|ref|NP_376233.1| - 0.3 10.6 6.3 0.37 10.3 0.4 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf-ISL3 PF14690.6 gi|15920564|ref|NP_376233.1| - 0.37 11.5 5.4 2.4 8.9 0.5 2.5 2 1 1 3 3 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf_C2H2_10 PF18414.1 gi|15920564|ref|NP_376233.1| - 0.4 10.3 2.1 8 6.1 0.1 2.2 2 0 0 2 2 2 0 C2H2 type zinc-finger zinc_ribbon_13 PF09855.9 gi|15920564|ref|NP_376233.1| - 0.46 10.7 3.7 1.3 9.2 0.4 2.2 1 1 1 2 2 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) Mu-like_Com PF10122.9 gi|15920564|ref|NP_376233.1| - 1.9 8.0 6.3 0.98 8.9 3.2 1.9 1 1 1 2 2 2 0 Mu-like prophage protein Com YhfH PF14149.6 gi|15920564|ref|NP_376233.1| - 2.3 8.3 8.6 13 5.9 7.9 2.1 1 1 1 2 2 2 0 YhfH-like protein Peptidase_M22 PF00814.25 gi|15920565|ref|NP_376234.1| - 1.1e-78 264.6 0.0 1.4e-78 264.3 0.0 1.0 1 0 0 1 1 1 1 Glycoprotease family RIO1 PF01163.22 gi|15920566|ref|NP_376235.1| - 5.3e-09 35.9 0.2 1.4e-08 34.6 0.0 1.7 1 1 1 2 2 2 1 RIO1 family Pkinase PF00069.25 gi|15920566|ref|NP_376235.1| - 8.2e-08 31.9 0.3 1e-07 31.6 0.3 1.2 1 0 0 1 1 1 1 Protein kinase domain Kdo PF06293.14 gi|15920566|ref|NP_376235.1| - 1.7e-07 30.8 0.0 2.9e-07 30.1 0.0 1.4 1 1 0 1 1 1 1 Lipopolysaccharide kinase (Kdo/WaaP) family APH PF01636.23 gi|15920566|ref|NP_376235.1| - 7e-07 29.4 0.0 2.7e-05 24.2 0.0 2.1 1 1 1 2 2 2 2 Phosphotransferase enzyme family Pkinase_Tyr PF07714.17 gi|15920566|ref|NP_376235.1| - 0.00016 21.1 0.0 0.0002 20.7 0.0 1.2 1 0 0 1 1 1 1 Protein tyrosine kinase EcKinase PF02958.20 gi|15920566|ref|NP_376235.1| - 0.0015 18.0 0.0 0.0025 17.2 0.0 1.4 1 0 0 1 1 1 1 Ecdysteroid kinase Choline_kinase PF01633.20 gi|15920566|ref|NP_376235.1| - 0.0097 15.5 0.1 0.016 14.8 0.1 1.4 1 0 0 1 1 1 1 Choline/ethanolamine kinase Kinase-like PF14531.6 gi|15920566|ref|NP_376235.1| - 0.04 13.2 0.0 0.063 12.6 0.0 1.2 1 0 0 1 1 1 0 Kinase-like Ham1p_like PF01725.16 gi|15920567|ref|NP_376236.1| - 2.3e-48 164.6 0.0 2.6e-48 164.4 0.0 1.0 1 0 0 1 1 1 1 Ham1 family Aldo_ket_red PF00248.21 gi|15920568|ref|NP_376237.1| - 3.3e-50 171.0 0.1 1e-49 169.3 0.1 1.7 1 1 0 1 1 1 1 Aldo/keto reductase family DUF5323 PF17257.2 gi|15920569|ref|NP_376238.1| - 0.12 12.3 0.3 0.18 11.7 0.3 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5323) vATP-synt_AC39 PF01992.16 gi|15920570|ref|NP_376239.1| - 1.2e-15 57.9 9.7 1.4e-15 57.6 9.7 1.1 1 0 0 1 1 1 1 ATP synthase (C/AC39) subunit YpM PF09144.10 gi|15920570|ref|NP_376239.1| - 0.11 12.7 0.3 0.2 11.8 0.3 1.4 1 0 0 1 1 1 0 Yersinia pseudo-tuberculosis mitogen DUF4735 PF15882.5 gi|15920571|ref|NP_376240.1| - 0.071 12.5 0.3 0.094 12.1 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4735) CFAP91 PF14738.6 gi|15920571|ref|NP_376240.1| - 0.086 12.9 5.0 0.049 13.7 3.4 1.4 2 0 0 2 2 2 0 Cilia- and flagella-associated protein 91 V-ATPase_G PF03179.15 gi|15920571|ref|NP_376240.1| - 0.097 13.2 8.3 0.36 11.4 6.3 2.3 1 1 1 2 2 2 0 Vacuolar (H+)-ATPase G subunit Carbpep_Y_N PF05388.11 gi|15920571|ref|NP_376240.1| - 0.11 13.0 3.9 0.14 12.7 3.9 1.2 1 0 0 1 1 1 0 Carboxypeptidase Y pro-peptide DUF883 PF05957.13 gi|15920571|ref|NP_376240.1| - 0.2 12.3 1.0 0.56 10.8 0.7 1.8 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF883) HSCB_C PF07743.13 gi|15920571|ref|NP_376240.1| - 0.44 11.1 5.6 2.5 8.6 5.6 2.2 1 1 0 1 1 1 0 HSCB C-terminal oligomerisation domain KNOX2 PF03791.13 gi|15920571|ref|NP_376240.1| - 0.46 10.0 2.1 0.97 9.0 0.0 2.4 4 0 0 4 4 4 0 KNOX2 domain RRF PF01765.19 gi|15920571|ref|NP_376240.1| - 0.72 9.8 12.3 3.2 7.7 12.3 2.0 1 1 0 1 1 1 0 Ribosome recycling factor YtxH PF12732.7 gi|15920571|ref|NP_376240.1| - 5.7 7.5 9.8 79 3.9 9.8 2.3 1 1 0 1 1 1 0 YtxH-like protein GCD14 PF08704.10 gi|15920572|ref|NP_376241.1| - 5.8e-33 114.6 0.0 8.1e-33 114.1 0.0 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit PCMT PF01135.19 gi|15920572|ref|NP_376241.1| - 2.6e-13 50.2 0.0 3.2e-13 49.9 0.0 1.1 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.6 gi|15920572|ref|NP_376241.1| - 7.8e-12 45.2 0.0 1e-11 44.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|15920572|ref|NP_376241.1| - 4.1e-08 33.8 0.0 6.3e-08 33.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|15920572|ref|NP_376241.1| - 7.5e-08 32.0 0.0 1.2e-07 31.4 0.0 1.2 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_11 PF08241.12 gi|15920572|ref|NP_376241.1| - 4.5e-06 27.2 0.0 7.6e-06 26.5 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|15920572|ref|NP_376241.1| - 1.9e-05 24.2 0.0 2.5e-05 23.8 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_18 PF12847.7 gi|15920572|ref|NP_376241.1| - 2.7e-05 24.2 0.0 6.7e-05 22.9 0.0 1.6 2 0 0 2 2 1 1 Methyltransferase domain Methyltransf_3 PF01596.17 gi|15920572|ref|NP_376241.1| - 4e-05 22.9 0.0 5.8e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 O-methyltransferase Methyltransf_24 PF13578.6 gi|15920572|ref|NP_376241.1| - 9.3e-05 23.4 0.0 0.00016 22.6 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|15920572|ref|NP_376241.1| - 0.00016 20.9 0.0 0.00022 20.4 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_16 PF10294.9 gi|15920572|ref|NP_376241.1| - 0.0002 21.1 0.0 0.00032 20.5 0.0 1.3 1 0 0 1 1 1 1 Lysine methyltransferase Methyltransf_4 PF02390.17 gi|15920572|ref|NP_376241.1| - 0.00087 18.8 0.0 0.0017 17.9 0.0 1.4 1 0 0 1 1 1 1 Putative methyltransferase MTS PF05175.14 gi|15920572|ref|NP_376241.1| - 0.0017 17.9 0.0 0.0055 16.3 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase small domain CMAS PF02353.20 gi|15920572|ref|NP_376241.1| - 0.0041 16.5 0.0 0.0058 16.0 0.0 1.3 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_15 PF09445.10 gi|15920572|ref|NP_376241.1| - 0.007 16.0 0.1 0.026 14.1 0.0 1.7 1 1 1 2 2 2 1 RNA cap guanine-N2 methyltransferase Methyltransf_32 PF13679.6 gi|15920572|ref|NP_376241.1| - 0.0075 16.3 0.0 0.0099 15.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|15920572|ref|NP_376241.1| - 0.0076 16.1 0.0 0.038 13.8 0.0 1.8 1 1 0 1 1 1 1 Methyltransferase domain GCD14_N PF14801.6 gi|15920572|ref|NP_376241.1| - 0.016 15.0 0.0 0.031 14.1 0.0 1.5 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit N-term Methyltransf_12 PF08242.12 gi|15920572|ref|NP_376241.1| - 0.019 15.7 0.0 0.047 14.4 0.0 1.7 1 1 0 1 1 1 0 Methyltransferase domain Met_10 PF02475.16 gi|15920572|ref|NP_376241.1| - 0.023 14.4 0.0 0.04 13.7 0.0 1.3 1 0 0 1 1 1 0 Met-10+ like-protein Methyltr_RsmB-F PF01189.17 gi|15920572|ref|NP_376241.1| - 0.029 14.0 0.0 0.044 13.4 0.0 1.2 1 0 0 1 1 1 0 16S rRNA methyltransferase RsmB/F TRM PF02005.16 gi|15920572|ref|NP_376241.1| - 0.092 11.9 0.0 0.1 11.8 0.0 1.1 1 0 0 1 1 1 0 N2,N2-dimethylguanosine tRNA methyltransferase FtsJ PF01728.19 gi|15920572|ref|NP_376241.1| - 0.15 12.2 0.0 0.2 11.7 0.0 1.2 1 0 0 1 1 1 0 FtsJ-like methyltransferase TrmB PF01978.19 gi|15920573|ref|NP_376242.1| - 8.6e-18 64.0 0.1 4.3e-17 61.8 0.0 2.0 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|15920573|ref|NP_376242.1| - 8.7e-06 25.6 0.1 2.4e-05 24.1 0.1 1.8 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|15920573|ref|NP_376242.1| - 2.2e-05 23.9 0.3 7.7e-05 22.2 0.1 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 gi|15920573|ref|NP_376242.1| - 0.0028 17.6 0.1 0.0087 16.0 0.1 2.0 1 0 0 1 1 1 1 HTH domain PadR PF03551.14 gi|15920573|ref|NP_376242.1| - 0.0034 17.3 0.0 0.0098 15.8 0.0 1.8 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_Crp_2 PF13545.6 gi|15920573|ref|NP_376242.1| - 0.019 15.0 0.0 0.064 13.2 0.0 1.9 1 1 0 1 1 1 0 Crp-like helix-turn-helix domain Cytokin_check_N PF10407.9 gi|15920573|ref|NP_376242.1| - 0.021 14.8 0.5 0.086 12.8 0.1 2.2 2 0 0 2 2 2 0 Cdc14 phosphatase binding protein N-terminus HTH_27 PF13463.6 gi|15920573|ref|NP_376242.1| - 0.023 15.2 0.0 0.058 13.9 0.0 1.7 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_34 PF13601.6 gi|15920573|ref|NP_376242.1| - 0.024 14.8 0.0 0.071 13.3 0.0 1.8 1 0 0 1 1 1 0 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|15920573|ref|NP_376242.1| - 0.029 14.3 0.0 0.094 12.6 0.0 1.8 1 1 1 2 2 2 0 MarR family HTH_IclR PF09339.10 gi|15920573|ref|NP_376242.1| - 0.029 14.2 0.0 0.14 11.9 0.0 1.9 2 0 0 2 2 2 0 IclR helix-turn-helix domain Rrf2 PF02082.20 gi|15920573|ref|NP_376242.1| - 0.037 14.4 0.1 0.21 12.0 0.0 2.3 2 1 0 2 2 2 0 Transcriptional regulator HTH_CodY PF08222.11 gi|15920573|ref|NP_376242.1| - 0.049 13.2 0.1 0.4 10.3 0.0 2.5 3 0 0 3 3 3 0 CodY helix-turn-helix domain HTH_7 PF02796.15 gi|15920573|ref|NP_376242.1| - 0.052 13.6 0.2 11 6.2 0.0 2.9 2 1 1 3 3 3 0 Helix-turn-helix domain of resolvase HTH_28 PF13518.6 gi|15920573|ref|NP_376242.1| - 0.079 13.1 0.0 1.9 8.6 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain DUF4980 PF16352.5 gi|15920573|ref|NP_376242.1| - 0.097 12.7 0.6 0.18 11.8 0.6 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4980) Penicillinase_R PF03965.16 gi|15920573|ref|NP_376242.1| - 0.11 12.9 0.1 0.33 11.3 0.0 1.8 2 0 0 2 2 2 0 Penicillinase repressor HTH_10 PF04967.12 gi|15920573|ref|NP_376242.1| - 0.13 12.1 0.3 3.9 7.4 0.0 2.9 3 0 0 3 3 3 0 HTH DNA binding domain Cecropin PF00272.19 gi|15920573|ref|NP_376242.1| - 0.15 11.8 0.0 0.36 10.6 0.0 1.6 1 0 0 1 1 1 0 Cecropin family Lipase_GDSL PF00657.22 gi|15920573|ref|NP_376242.1| - 0.18 11.7 0.6 1.5 8.7 0.2 2.1 2 0 0 2 2 2 0 GDSL-like Lipase/Acylhydrolase Ribosomal_S25 PF03297.15 gi|15920574|ref|NP_376243.1| - 1.5e-19 70.0 11.8 1.9e-19 69.8 11.8 1.0 1 0 0 1 1 1 1 S25 ribosomal protein HTH_24 PF13412.6 gi|15920574|ref|NP_376243.1| - 0.00021 20.8 0.3 0.024 14.2 0.1 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding EAP30 PF04157.16 gi|15920574|ref|NP_376243.1| - 0.0041 16.5 2.6 0.014 14.7 2.6 1.7 1 1 0 1 1 1 1 EAP30/Vps36 family TrmB PF01978.19 gi|15920574|ref|NP_376243.1| - 0.0044 16.9 1.8 0.0067 16.3 0.4 2.0 2 1 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.12 gi|15920574|ref|NP_376243.1| - 0.0053 16.7 0.5 0.0053 16.7 0.5 1.8 3 0 0 3 3 3 1 HTH domain Fe_dep_repress PF01325.19 gi|15920574|ref|NP_376243.1| - 0.0057 16.8 0.3 0.0057 16.8 0.3 2.1 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain Rrf2 PF02082.20 gi|15920574|ref|NP_376243.1| - 0.023 15.0 2.6 0.2 12.0 0.2 2.3 1 1 1 2 2 2 0 Transcriptional regulator FtsK_gamma PF09397.10 gi|15920574|ref|NP_376243.1| - 0.025 14.4 0.1 0.2 11.5 0.0 2.1 1 1 1 2 2 2 0 Ftsk gamma domain HTH_Crp_2 PF13545.6 gi|15920574|ref|NP_376243.1| - 0.055 13.4 0.9 0.13 12.2 0.3 2.0 1 1 0 2 2 2 0 Crp-like helix-turn-helix domain AAA_17 PF13207.6 gi|15920574|ref|NP_376243.1| - 0.06 13.8 3.8 0.093 13.2 3.8 1.4 1 1 0 1 1 1 0 AAA domain PIEZO PF15917.5 gi|15920574|ref|NP_376243.1| - 0.14 11.6 4.6 0.16 11.4 4.6 1.2 1 0 0 1 1 1 0 Piezo DUF3921 PF13060.6 gi|15920574|ref|NP_376243.1| - 0.22 11.6 2.4 0.51 10.4 0.4 2.2 2 1 0 2 2 2 0 Protein of unknown function (DUF3921) HK97-gp10_like PF04883.12 gi|15920574|ref|NP_376243.1| - 0.25 12.3 5.5 0.5 11.4 5.5 1.7 1 1 0 1 1 1 0 Bacteriophage HK97-gp10, putative tail-component DUF1104 PF06518.11 gi|15920574|ref|NP_376243.1| - 0.37 11.2 9.2 0.72 10.3 9.2 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1104) DUF3801 PF12687.7 gi|15920574|ref|NP_376243.1| - 4.3 7.4 12.9 7 6.7 10.5 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF3801) CN_hydrolase PF00795.22 gi|15920575|ref|NP_376244.1| - 1.5e-20 73.6 0.0 1.8e-20 73.4 0.0 1.1 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase DUF5089 PF17002.5 gi|15920575|ref|NP_376244.1| - 0.081 12.8 2.5 0.42 10.5 0.2 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF5089) Topoisom_bac PF01131.20 gi|15920576|ref|NP_376245.1| - 3.2e-77 260.3 6.1 5.9e-77 259.4 6.1 1.5 1 0 0 1 1 1 1 DNA topoisomerase Toprim PF01751.22 gi|15920576|ref|NP_376245.1| - 5.7e-27 93.9 0.1 2.9e-26 91.7 0.1 2.3 1 0 0 1 1 1 1 Toprim domain Helicase_C PF00271.31 gi|15920576|ref|NP_376245.1| - 5.2e-06 26.8 2.1 0.79 10.1 0.0 4.9 4 0 0 4 4 4 2 Helicase conserved C-terminal domain AAA PF00004.29 gi|15920578|ref|NP_376247.1| - 2.4e-98 325.7 0.0 3.3e-48 163.4 0.0 2.8 3 0 0 3 3 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|15920578|ref|NP_376247.1| - 2.7e-31 107.1 4.5 8.1e-15 54.4 0.4 3.0 2 1 0 2 2 2 2 AAA+ lid domain CDC48_N PF02359.18 gi|15920578|ref|NP_376247.1| - 6.5e-25 87.1 0.2 2.2e-24 85.4 0.2 2.0 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain CDC48_2 PF02933.17 gi|15920578|ref|NP_376247.1| - 5.4e-17 61.3 0.5 1.8e-16 59.6 0.0 2.2 2 0 0 2 2 1 1 Cell division protein 48 (CDC48), domain 2 RuvB_N PF05496.12 gi|15920578|ref|NP_376247.1| - 8.1e-17 61.4 0.0 2.1e-08 34.1 0.0 2.8 2 1 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_2 PF07724.14 gi|15920578|ref|NP_376247.1| - 7.3e-15 55.5 0.0 5.3e-07 29.9 0.0 2.6 2 0 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_16 PF13191.6 gi|15920578|ref|NP_376247.1| - 3.5e-12 47.0 1.7 0.0003 21.2 0.0 4.5 2 2 1 4 4 4 2 AAA ATPase domain AAA_5 PF07728.14 gi|15920578|ref|NP_376247.1| - 4.2e-12 46.2 0.4 0.00012 22.1 0.0 4.1 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) TIP49 PF06068.13 gi|15920578|ref|NP_376247.1| - 6.9e-12 45.2 0.0 6.1e-05 22.4 0.0 3.3 3 0 0 3 3 3 2 TIP49 P-loop domain AAA_22 PF13401.6 gi|15920578|ref|NP_376247.1| - 2.4e-11 44.1 0.3 0.009 16.3 0.1 4.3 2 2 2 4 4 4 3 AAA domain Vps4_C PF09336.10 gi|15920578|ref|NP_376247.1| - 6.7e-11 42.0 0.8 0.00017 21.5 0.1 2.9 2 0 0 2 2 2 2 Vps4 C terminal oligomerisation domain AAA_18 PF13238.6 gi|15920578|ref|NP_376247.1| - 1.9e-10 41.4 0.7 0.038 14.5 0.0 3.7 3 0 0 3 3 3 3 AAA domain AAA_14 PF13173.6 gi|15920578|ref|NP_376247.1| - 3.3e-10 40.1 0.0 0.00064 19.8 0.0 2.8 2 0 0 2 2 2 2 AAA domain AAA_33 PF13671.6 gi|15920578|ref|NP_376247.1| - 5.2e-10 39.7 0.0 0.0016 18.6 0.0 2.7 2 0 0 2 2 2 2 AAA domain IstB_IS21 PF01695.17 gi|15920578|ref|NP_376247.1| - 7.9e-09 35.5 0.0 0.0015 18.3 0.0 2.6 2 0 0 2 2 2 2 IstB-like ATP binding protein AAA_28 PF13521.6 gi|15920578|ref|NP_376247.1| - 2.3e-07 31.2 0.0 0.037 14.3 0.0 2.7 2 0 0 2 2 2 2 AAA domain RNA_helicase PF00910.22 gi|15920578|ref|NP_376247.1| - 2.7e-07 30.9 0.0 0.0076 16.6 0.0 2.9 2 0 0 2 2 2 2 RNA helicase Mg_chelatase PF01078.21 gi|15920578|ref|NP_376247.1| - 2.8e-07 30.1 1.0 0.0082 15.6 0.1 2.6 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI TsaE PF02367.17 gi|15920578|ref|NP_376247.1| - 1.6e-06 28.1 0.2 0.072 13.1 0.0 3.0 2 2 1 3 3 3 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_24 PF13479.6 gi|15920578|ref|NP_376247.1| - 6.6e-06 26.0 0.0 0.098 12.4 0.0 2.5 2 0 0 2 2 2 2 AAA domain ABC_tran PF00005.27 gi|15920578|ref|NP_376247.1| - 1.6e-05 25.4 0.0 0.9 10.1 0.0 3.5 3 0 0 3 3 3 2 ABC transporter AAA_3 PF07726.11 gi|15920578|ref|NP_376247.1| - 1.8e-05 24.6 0.0 0.2 11.5 0.0 2.8 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) ATPase_2 PF01637.18 gi|15920578|ref|NP_376247.1| - 2e-05 24.6 0.3 0.033 14.1 0.0 3.6 3 1 1 4 4 3 1 ATPase domain predominantly from Archaea AAA_25 PF13481.6 gi|15920578|ref|NP_376247.1| - 2.5e-05 24.0 3.3 0.38 10.3 0.4 3.9 2 2 0 3 3 3 1 AAA domain NACHT PF05729.12 gi|15920578|ref|NP_376247.1| - 3.5e-05 23.8 0.8 0.61 10.0 0.1 3.5 4 0 0 4 4 3 2 NACHT domain Bac_DnaA PF00308.18 gi|15920578|ref|NP_376247.1| - 4e-05 23.6 0.0 0.067 13.0 0.0 3.5 3 1 0 3 3 3 1 Bacterial dnaA protein Sigma54_activat PF00158.26 gi|15920578|ref|NP_376247.1| - 5.3e-05 23.0 0.3 0.59 9.8 0.0 4.0 2 2 0 2 2 2 2 Sigma-54 interaction domain Zeta_toxin PF06414.12 gi|15920578|ref|NP_376247.1| - 5.6e-05 22.5 0.0 0.15 11.3 0.0 2.5 2 0 0 2 2 2 2 Zeta toxin ATPase PF06745.13 gi|15920578|ref|NP_376247.1| - 0.00011 21.6 3.4 0.14 11.5 0.0 4.3 5 0 0 5 5 5 1 KaiC DUF815 PF05673.13 gi|15920578|ref|NP_376247.1| - 0.00014 21.1 0.0 0.11 11.7 0.0 2.5 2 0 0 2 2 2 2 Protein of unknown function (DUF815) AAA_7 PF12775.7 gi|15920578|ref|NP_376247.1| - 0.00017 21.2 0.0 0.5 9.8 0.0 2.7 2 1 0 2 2 2 2 P-loop containing dynein motor region Rad17 PF03215.15 gi|15920578|ref|NP_376247.1| - 0.00018 21.5 0.0 1.1 9.1 0.0 3.3 2 1 1 3 3 3 1 Rad17 P-loop domain TniB PF05621.11 gi|15920578|ref|NP_376247.1| - 0.00036 20.0 0.1 0.71 9.2 0.0 3.5 4 0 0 4 4 3 1 Bacterial TniB protein Parvo_NS1 PF01057.17 gi|15920578|ref|NP_376247.1| - 0.00042 19.5 0.1 0.92 8.5 0.1 2.4 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 Molydop_binding PF01568.21 gi|15920578|ref|NP_376247.1| - 0.0011 18.9 0.0 0.0027 17.7 0.0 1.6 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain AFG1_ATPase PF03969.16 gi|15920578|ref|NP_376247.1| - 0.0013 17.8 0.0 0.39 9.6 0.0 2.5 2 0 0 2 2 2 1 AFG1-like ATPase PhoH PF02562.16 gi|15920578|ref|NP_376247.1| - 0.0013 18.3 0.5 0.45 9.9 0.2 2.7 2 0 0 2 2 2 1 PhoH-like protein UFD1 PF03152.14 gi|15920578|ref|NP_376247.1| - 0.0018 17.8 0.0 0.0072 15.8 0.0 1.9 1 1 0 2 2 2 1 Ubiquitin fusion degradation protein UFD1 AAA_17 PF13207.6 gi|15920578|ref|NP_376247.1| - 0.0023 18.3 0.0 4.2 7.8 0.0 3.3 2 0 0 2 2 2 0 AAA domain Sigma54_activ_2 PF14532.6 gi|15920578|ref|NP_376247.1| - 0.0033 17.5 0.0 2.8 8.0 0.0 2.7 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_11 PF13086.6 gi|15920578|ref|NP_376247.1| - 0.0085 15.9 0.2 3 7.6 0.0 2.7 3 0 0 3 3 2 1 AAA domain Guanylate_kin PF00625.21 gi|15920578|ref|NP_376247.1| - 0.01 15.5 2.8 14 5.3 0.0 4.8 3 2 2 5 5 5 0 Guanylate kinase NTPase_1 PF03266.15 gi|15920578|ref|NP_376247.1| - 0.013 15.4 2.4 18 5.2 0.0 4.4 4 1 1 5 5 3 0 NTPase AAA_19 PF13245.6 gi|15920578|ref|NP_376247.1| - 0.014 15.7 2.3 2.5 8.4 0.2 3.1 2 2 1 3 3 3 0 AAA domain DUF2075 PF09848.9 gi|15920578|ref|NP_376247.1| - 0.016 14.4 0.0 3.3 6.8 0.0 2.6 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2075) Cytidylate_kin PF02224.18 gi|15920578|ref|NP_376247.1| - 0.017 14.9 0.5 6.2 6.5 0.0 2.8 3 0 0 3 3 2 0 Cytidylate kinase IPT PF01745.16 gi|15920578|ref|NP_376247.1| - 0.017 14.5 0.1 1.4 8.2 0.1 2.3 2 0 0 2 2 2 0 Isopentenyl transferase PduV-EutP PF10662.9 gi|15920578|ref|NP_376247.1| - 0.024 14.4 0.2 10 5.9 0.0 3.2 3 0 0 3 3 3 0 Ethanolamine utilisation - propanediol utilisation SKI PF01202.22 gi|15920578|ref|NP_376247.1| - 0.032 14.3 0.0 11 6.1 0.0 2.7 2 0 0 2 2 2 0 Shikimate kinase AAA_29 PF13555.6 gi|15920578|ref|NP_376247.1| - 0.036 13.8 0.3 11 5.8 0.0 3.1 4 0 0 4 4 2 0 P-loop containing region of AAA domain AAA_30 PF13604.6 gi|15920578|ref|NP_376247.1| - 0.036 13.8 1.3 3.3 7.4 0.2 2.9 2 1 0 2 2 2 0 AAA domain Cytidylate_kin2 PF13189.6 gi|15920578|ref|NP_376247.1| - 0.037 14.2 0.0 9.4 6.3 0.0 2.7 2 0 0 2 2 2 0 Cytidylate kinase-like family NB-ARC PF00931.22 gi|15920578|ref|NP_376247.1| - 0.044 13.0 0.1 10 5.2 0.1 2.5 2 0 0 2 2 2 0 NB-ARC domain T2SSE PF00437.20 gi|15920578|ref|NP_376247.1| - 0.045 12.8 0.0 6.8 5.7 0.0 2.5 2 0 0 2 2 2 0 Type II/IV secretion system protein Viral_helicase1 PF01443.18 gi|15920578|ref|NP_376247.1| - 0.061 13.0 0.0 0.75 9.5 0.0 2.2 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase PhosphMutase PF10143.9 gi|15920579|ref|NP_376248.1| - 3e-54 183.4 0.0 5.2e-54 182.7 0.0 1.4 1 0 0 1 1 1 1 2,3-bisphosphoglycerate-independent phosphoglycerate mutase Metalloenzyme PF01676.18 gi|15920579|ref|NP_376248.1| - 1.2e-34 119.8 0.0 1.4e-34 119.6 0.0 1.0 1 0 0 1 1 1 1 Metalloenzyme superfamily Phosphodiest PF01663.22 gi|15920579|ref|NP_376248.1| - 0.00049 19.8 0.0 0.0033 17.1 0.0 2.0 2 0 0 2 2 2 1 Type I phosphodiesterase / nucleotide pyrophosphatase DUF359 PF04019.12 gi|15920580|ref|NP_376249.1| - 4e-35 120.2 1.8 5e-35 119.9 1.8 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF359) TPPII PF12580.8 gi|15920580|ref|NP_376249.1| - 0.00016 21.2 0.1 0.00021 20.8 0.1 1.2 1 0 0 1 1 1 1 Tripeptidyl peptidase II SporV_AA PF12164.8 gi|15920580|ref|NP_376249.1| - 0.0052 17.1 3.5 0.022 15.1 3.5 2.0 1 1 0 1 1 1 1 Stage V sporulation protein AA Spt4 PF06093.13 gi|15920581|ref|NP_376250.1| - 3.2e-14 52.8 0.1 4e-14 52.5 0.1 1.1 1 0 0 1 1 1 1 Spt4/RpoE2 zinc finger UPF0547 PF10571.9 gi|15920581|ref|NP_376250.1| - 0.0049 16.9 5.0 0.0072 16.4 5.0 1.3 1 0 0 1 1 1 1 Uncharacterised protein family UPF0547 zinc_ribbon_2 PF13240.6 gi|15920581|ref|NP_376250.1| - 0.0077 15.9 1.7 0.011 15.4 1.7 1.3 1 0 0 1 1 1 1 zinc-ribbon domain zinc_ribbon_15 PF17032.5 gi|15920581|ref|NP_376250.1| - 0.011 16.5 1.5 0.013 16.2 1.5 1.1 1 0 0 1 1 1 0 zinc-ribbon family DZR PF12773.7 gi|15920581|ref|NP_376250.1| - 0.015 15.3 2.6 0.021 14.9 2.6 1.2 1 0 0 1 1 1 0 Double zinc ribbon zf-C4H2 PF10146.9 gi|15920581|ref|NP_376250.1| - 0.041 14.2 0.9 0.049 13.9 0.9 1.1 1 0 0 1 1 1 0 Zinc finger-containing protein RecR PF02132.15 gi|15920581|ref|NP_376250.1| - 0.042 13.4 0.8 0.063 12.9 0.8 1.3 1 0 0 1 1 1 0 RecR protein zf-C3HC4_3 PF13920.6 gi|15920581|ref|NP_376250.1| - 0.059 13.2 1.7 0.078 12.8 1.7 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) zf-RRN7 PF11781.8 gi|15920581|ref|NP_376250.1| - 0.074 12.7 2.0 0.18 11.5 0.1 2.0 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 TF_Zn_Ribbon PF08271.12 gi|15920581|ref|NP_376250.1| - 0.13 11.8 2.4 0.62 9.6 0.3 2.2 1 1 1 2 2 2 0 TFIIB zinc-binding NRDD PF13597.6 gi|15920581|ref|NP_376250.1| - 0.15 10.9 0.4 0.17 10.7 0.4 1.0 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase zf-ribbon_3 PF13248.6 gi|15920581|ref|NP_376250.1| - 0.87 9.1 6.0 0.36 10.3 0.4 2.0 1 1 0 2 2 2 0 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|15920581|ref|NP_376250.1| - 0.94 9.7 5.0 5.2 7.3 5.0 2.0 1 1 0 1 1 1 0 Zinc ribbon domain SHS2_Rpb7-N PF03876.17 gi|15920582|ref|NP_376251.1| - 3.1e-18 65.9 0.1 7.3e-18 64.7 0.0 1.7 2 0 0 2 2 2 1 SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397 S1 PF00575.23 gi|15920582|ref|NP_376251.1| - 7.7e-15 55.0 1.9 7.7e-15 55.0 1.9 1.7 2 0 0 2 2 2 1 S1 RNA binding domain RNA_pol_Rbc25 PF08292.12 gi|15920582|ref|NP_376251.1| - 0.038 14.2 0.0 0.059 13.6 0.0 1.4 1 0 0 1 1 1 0 RNA polymerase III subunit Rpc25 TylF PF05711.11 gi|15920582|ref|NP_376251.1| - 0.1 11.9 0.1 0.16 11.2 0.1 1.3 1 0 0 1 1 1 0 Macrocin-O-methyltransferase (TylF) PIN_9 PF18477.1 gi|15920583|ref|NP_376252.1| - 1.1e-15 58.0 0.0 1.3e-15 57.7 0.0 1.1 1 0 0 1 1 1 1 PIN like domain PIN_4 PF13638.6 gi|15920583|ref|NP_376252.1| - 1.3e-08 35.2 0.3 1.1e-06 29.0 0.3 2.1 1 1 0 1 1 1 1 PIN domain PIN PF01850.21 gi|15920583|ref|NP_376252.1| - 1.6e-06 28.6 0.2 8.1e-06 26.4 0.2 1.8 1 1 0 1 1 1 1 PIN domain DivIVA PF05103.13 gi|15920583|ref|NP_376252.1| - 0.0099 16.0 0.1 0.016 15.3 0.1 1.3 1 0 0 1 1 1 1 DivIVA protein Atypical_Card PF18461.1 gi|15920583|ref|NP_376252.1| - 0.069 13.4 0.0 0.13 12.5 0.0 1.4 1 0 0 1 1 1 0 Atypical caspase recruitment domain MSA-2c PF12238.8 gi|15920583|ref|NP_376252.1| - 0.069 13.2 0.6 0.086 12.8 0.6 1.2 1 0 0 1 1 1 0 Merozoite surface antigen 2c GTP_EFTU PF00009.27 gi|15920584|ref|NP_376253.1| - 4e-31 108.1 0.2 2e-30 105.8 0.2 1.9 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain eIF2_C PF09173.11 gi|15920584|ref|NP_376253.1| - 1.2e-27 96.0 3.0 1.4e-27 95.7 1.8 1.8 2 0 0 2 2 2 1 Initiation factor eIF2 gamma, C terminal GTP_EFTU_D2 PF03144.25 gi|15920584|ref|NP_376253.1| - 5.6e-08 33.1 2.0 2.7e-07 30.9 0.2 2.7 3 1 0 3 3 3 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|15920584|ref|NP_376253.1| - 2.7e-05 24.2 0.0 5.6e-05 23.2 0.0 1.6 1 0 0 1 1 1 1 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 gi|15920584|ref|NP_376253.1| - 2.9e-05 24.0 0.3 0.00096 19.1 0.0 2.2 2 0 0 2 2 2 1 RsgA GTPase PduV-EutP PF10662.9 gi|15920584|ref|NP_376253.1| - 0.00015 21.6 0.3 0.5 10.1 0.1 2.5 2 0 0 2 2 2 2 Ethanolamine utilisation - propanediol utilisation MMR_HSR1_Xtn PF16897.5 gi|15920584|ref|NP_376253.1| - 0.001 19.1 0.1 0.0021 18.0 0.1 1.5 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain FeoB_N PF02421.18 gi|15920584|ref|NP_376253.1| - 0.014 14.9 0.9 5 6.6 0.1 2.4 2 0 0 2 2 2 0 Ferrous iron transport protein B MeaB PF03308.16 gi|15920584|ref|NP_376253.1| - 0.024 13.6 0.4 0.16 10.9 0.1 2.0 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Rubredoxin_2 PF18073.1 gi|15920584|ref|NP_376253.1| - 0.32 10.8 4.1 6.2 6.7 1.0 2.3 2 0 0 2 2 2 0 Rubredoxin metal binding domain TF_Zn_Ribbon PF08271.12 gi|15920584|ref|NP_376253.1| - 2.4 7.7 4.6 5 6.7 4.6 1.5 1 0 0 1 1 1 0 TFIIB zinc-binding zf-ribbon_3 PF13248.6 gi|15920584|ref|NP_376253.1| - 6.1 6.4 6.5 17 5.0 0.3 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Ribosomal_S6e PF01092.19 gi|161751100|ref|NP_376254.2| - 1.9e-27 95.7 0.9 1.6e-25 89.5 0.0 2.3 2 0 0 2 2 2 2 Ribosomal protein S6e CbiX PF01903.17 gi|15920586|ref|NP_376255.1| - 7.8e-26 90.5 0.0 9.6e-26 90.2 0.0 1.1 1 0 0 1 1 1 1 CbiX CbiK PF06180.11 gi|15920586|ref|NP_376255.1| - 6.1e-07 29.0 0.0 7.1e-07 28.8 0.0 1.1 1 0 0 1 1 1 1 Cobalt chelatase (CbiK) Ferrochelatase PF00762.19 gi|15920586|ref|NP_376255.1| - 0.00012 21.3 0.0 0.041 13.0 0.0 1.4 1 1 1 2 2 2 2 Ferrochelatase Ribosomal_S13_N PF08069.12 gi|15920587|ref|NP_376256.1| - 2.5e-23 81.9 0.2 8.2e-23 80.2 0.1 1.9 2 0 0 2 2 2 1 Ribosomal S13/S15 N-terminal domain Ribosomal_S15 PF00312.22 gi|15920587|ref|NP_376256.1| - 3.8e-15 55.8 0.3 5.4e-15 55.4 0.3 1.2 1 0 0 1 1 1 1 Ribosomal protein S15 YflT PF11181.8 gi|15920587|ref|NP_376256.1| - 0.1 13.1 0.0 0.15 12.6 0.0 1.4 1 1 0 1 1 1 0 Heat induced stress protein YflT RecG_N PF17190.4 gi|15920587|ref|NP_376256.1| - 0.17 12.7 1.6 0.27 12.0 0.5 2.1 2 1 0 2 2 2 0 RecG N-terminal helical domain Meth_synt_2 PF01717.18 gi|15920588|ref|NP_376257.1| - 9.3e-64 215.7 0.0 1.1e-63 215.5 0.0 1.0 1 0 0 1 1 1 1 Cobalamin-independent synthase, Catalytic domain Meth_synt_1 PF08267.12 gi|15920588|ref|NP_376257.1| - 1.2e-12 48.0 1.7 4.2e-12 46.2 2.1 1.5 2 0 0 2 2 2 1 Cobalamin-independent synthase, N-terminal domain Meth_synt_1 PF08267.12 gi|15920589|ref|NP_376258.1| - 4e-20 72.6 7.2 4.5e-20 72.4 5.7 1.7 1 1 1 2 2 2 1 Cobalamin-independent synthase, N-terminal domain Meth_synt_2 PF01717.18 gi|15920589|ref|NP_376258.1| - 1.8e-06 27.4 0.0 4.5e-06 26.2 0.0 1.6 1 1 0 1 1 1 1 Cobalamin-independent synthase, Catalytic domain PCNA_N PF00705.18 gi|15920590|ref|NP_376259.1| - 9.8e-18 64.1 1.0 7.2e-17 61.3 0.1 2.3 2 1 1 3 3 3 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 gi|15920590|ref|NP_376259.1| - 1.9e-11 44.2 0.6 3.7e-08 33.6 0.1 2.3 2 0 0 2 2 2 2 Proliferating cell nuclear antigen, C-terminal domain Rad1 PF02144.16 gi|15920590|ref|NP_376259.1| - 3.5e-07 29.6 0.2 0.00063 18.9 0.0 2.2 1 1 1 2 2 2 2 Repair protein Rad1/Rec1/Rad17 Rad9 PF04139.13 gi|15920590|ref|NP_376259.1| - 0.00033 20.2 0.1 0.00078 19.0 0.1 1.7 1 1 0 1 1 1 1 Rad9 DNA_pol3_beta_3 PF02768.15 gi|15920590|ref|NP_376259.1| - 0.0018 18.1 1.4 1.1 9.0 0.5 2.4 2 0 0 2 2 2 2 DNA polymerase III beta subunit, C-terminal domain DUF2807 PF10988.8 gi|15920590|ref|NP_376259.1| - 0.04 13.7 1.9 0.12 12.2 0.7 2.0 1 1 1 2 2 2 0 Putative auto-transporter adhesin, head GIN domain GATase_3 PF07685.14 gi|15920592|ref|NP_376261.1| - 1e-39 136.2 0.1 1.5e-39 135.6 0.1 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain AAA_26 PF13500.6 gi|15920592|ref|NP_376261.1| - 5.6e-14 52.4 0.1 6.6e-09 35.9 0.0 2.4 2 0 0 2 2 2 2 AAA domain CbiA PF01656.23 gi|15920592|ref|NP_376261.1| - 7e-11 42.3 0.1 1.8e-10 41.0 0.0 1.7 2 0 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain Peptidase_S51 PF03575.17 gi|15920592|ref|NP_376261.1| - 0.079 12.6 0.2 0.22 11.1 0.0 1.7 2 0 0 2 2 2 0 Peptidase family S51 DUF2208 PF09973.9 gi|15920593|ref|NP_376262.1| - 1.4e-72 244.1 22.1 1.6e-72 243.9 22.1 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2208) CitMHS PF03600.16 gi|15920593|ref|NP_376262.1| - 0.022 14.0 0.2 0.025 13.8 0.2 1.1 1 0 0 1 1 1 0 Citrate transporter EMC3_TMCO1 PF01956.16 gi|15920593|ref|NP_376262.1| - 0.046 13.5 11.2 0.11 12.2 10.8 2.0 1 1 0 1 1 1 0 Integral membrane protein EMC3/TMCO1-like DHBP_synthase PF00926.19 gi|15920595|ref|NP_376264.1| - 2.3e-45 154.5 0.0 2.7e-45 154.3 0.0 1.0 1 0 0 1 1 1 1 3,4-dihydroxy-2-butanone 4-phosphate synthase DMRL_synthase PF00885.19 gi|15920596|ref|NP_376265.1| - 4e-10 39.7 0.1 4.9e-10 39.4 0.1 1.2 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase TraI_2B PF18340.1 gi|15920596|ref|NP_376265.1| - 0.12 12.5 0.3 0.21 11.7 0.3 1.4 1 0 0 1 1 1 0 DNA relaxase TraI 2B/2B-like domain DMRL_synthase PF00885.19 gi|15920597|ref|NP_376266.1| - 2.5e-35 121.4 1.5 2.9e-35 121.1 1.5 1.0 1 0 0 1 1 1 1 6,7-dimethyl-8-ribityllumazine synthase Metallophos_3 PF14582.6 gi|15920597|ref|NP_376266.1| - 0.00058 19.3 1.1 0.073 12.4 0.3 2.1 1 1 1 2 2 2 2 Metallophosphoesterase, calcineurin superfamily TM_PBP2_N PF16296.5 gi|15920597|ref|NP_376266.1| - 0.089 12.9 0.1 1.3 9.2 0.0 2.3 2 0 0 2 2 2 0 N-terminal of TM subunit in PBP-dependent ABC transporters GCH_III PF05165.12 gi|15920598|ref|NP_376267.1| - 1.8e-27 96.2 0.0 9.7e-13 47.9 0.0 2.1 1 1 1 2 2 2 2 GTP cyclohydrolase III mCpol PF18182.1 gi|15920598|ref|NP_376267.1| - 0.061 13.7 0.0 0.4 11.0 0.0 2.1 2 0 0 2 2 2 0 minimal CRISPR polymerase domain Amidohydro_1 PF01979.20 gi|15920599|ref|NP_376268.1| - 3.2e-12 46.5 0.0 4e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 Amidohydrolase family PCNA_C PF02747.15 gi|15920600|ref|NP_376269.1| - 1.2e-08 35.2 0.3 1.7e-07 31.4 0.0 2.7 1 1 1 3 3 3 1 Proliferating cell nuclear antigen, C-terminal domain PCNA_N PF00705.18 gi|15920600|ref|NP_376269.1| - 2.3e-07 30.6 0.5 1e-06 28.5 0.1 2.0 2 1 0 2 2 2 1 Proliferating cell nuclear antigen, N-terminal domain Rad1 PF02144.16 gi|15920600|ref|NP_376269.1| - 0.0072 15.4 1.8 0.084 11.9 0.3 2.4 1 1 2 3 3 3 1 Repair protein Rad1/Rec1/Rad17 Hus1 PF04005.12 gi|15920600|ref|NP_376269.1| - 0.083 12.0 0.0 0.13 11.4 0.0 1.4 1 1 0 1 1 1 0 Hus1-like protein RNA_pol_Rpo13 PF12136.8 gi|15920601|ref|NP_376270.1| - 3e-18 65.4 5.4 3e-18 65.4 5.4 3.5 3 1 0 3 3 3 1 RNA polymerase Rpo13 subunit HTH domain Peptidase_S46 PF10459.9 gi|15920601|ref|NP_376270.1| - 5 5.6 14.1 6.2 5.3 14.1 1.0 1 0 0 1 1 1 0 Peptidase S46 AAA_10 PF12846.7 gi|15920603|ref|NP_376272.1| - 8.3e-10 38.1 0.0 4.8e-06 25.7 0.0 2.4 2 0 0 2 2 2 2 AAA-like domain DUF87 PF01935.17 gi|15920603|ref|NP_376272.1| - 2.6e-09 37.5 5.2 9.2e-09 35.7 4.9 2.1 1 1 0 1 1 1 1 Helicase HerA, central domain AAA_22 PF13401.6 gi|15920603|ref|NP_376272.1| - 2.2e-06 28.0 0.0 0.0019 18.4 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_18 PF13238.6 gi|15920603|ref|NP_376272.1| - 5.3e-05 23.8 0.1 0.00026 21.5 0.0 2.0 2 0 0 2 2 2 1 AAA domain AAA PF00004.29 gi|15920603|ref|NP_376272.1| - 0.00011 22.6 0.6 0.0062 17.0 0.0 2.3 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 gi|15920603|ref|NP_376272.1| - 0.001 19.0 0.0 0.0029 17.5 0.0 1.7 1 0 0 1 1 1 1 RsgA GTPase TrwB_AAD_bind PF10412.9 gi|15920603|ref|NP_376272.1| - 0.0015 17.5 0.0 0.2 10.5 0.0 2.2 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain AAA_14 PF13173.6 gi|15920603|ref|NP_376272.1| - 0.0016 18.5 4.0 0.066 13.2 0.0 3.3 3 1 0 3 3 3 1 AAA domain NB-ARC PF00931.22 gi|15920603|ref|NP_376272.1| - 0.0025 17.0 0.0 0.0043 16.3 0.0 1.3 1 0 0 1 1 1 1 NB-ARC domain AAA_7 PF12775.7 gi|15920603|ref|NP_376272.1| - 0.0027 17.3 0.0 0.0065 16.0 0.0 1.6 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_24 PF13479.6 gi|15920603|ref|NP_376272.1| - 0.0033 17.2 0.0 0.0068 16.1 0.0 1.5 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 gi|15920603|ref|NP_376272.1| - 0.0035 17.9 0.0 0.0092 16.5 0.0 1.7 1 0 0 1 1 1 1 ABC transporter AAA_16 PF13191.6 gi|15920603|ref|NP_376272.1| - 0.0041 17.5 0.0 0.0086 16.5 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain NACHT PF05729.12 gi|15920603|ref|NP_376272.1| - 0.0044 16.9 0.0 0.019 14.9 0.0 1.9 2 0 0 2 2 2 1 NACHT domain AAA_29 PF13555.6 gi|15920603|ref|NP_376272.1| - 0.0046 16.7 1.6 0.0088 15.8 0.2 2.1 2 0 0 2 2 2 1 P-loop containing region of AAA domain MMR_HSR1 PF01926.23 gi|15920603|ref|NP_376272.1| - 0.0082 16.2 0.2 0.029 14.4 0.1 2.0 2 0 0 2 2 2 1 50S ribosome-binding GTPase RNA_helicase PF00910.22 gi|15920603|ref|NP_376272.1| - 0.0083 16.5 0.2 0.14 12.5 0.0 2.6 2 0 0 2 2 2 1 RNA helicase AAA_5 PF07728.14 gi|15920603|ref|NP_376272.1| - 0.011 15.8 0.0 0.023 14.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) NTPase_1 PF03266.15 gi|15920603|ref|NP_376272.1| - 0.012 15.5 0.2 0.036 14.0 0.1 1.8 2 0 0 2 2 2 0 NTPase IstB_IS21 PF01695.17 gi|15920603|ref|NP_376272.1| - 0.022 14.5 0.0 0.045 13.5 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_33 PF13671.6 gi|15920603|ref|NP_376272.1| - 0.025 14.7 0.0 0.047 13.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_17 PF13207.6 gi|15920603|ref|NP_376272.1| - 0.027 14.9 0.1 0.082 13.3 0.0 1.8 2 0 0 2 2 2 0 AAA domain FtsK_SpoIIIE PF01580.18 gi|15920603|ref|NP_376272.1| - 0.036 13.4 0.0 0.06 12.7 0.0 1.2 1 0 0 1 1 1 0 FtsK/SpoIIIE family Sigma54_activat PF00158.26 gi|15920603|ref|NP_376272.1| - 0.068 12.9 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_28 PF13521.6 gi|15920603|ref|NP_376272.1| - 0.1 12.8 0.0 0.18 12.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain DUF815 PF05673.13 gi|15920603|ref|NP_376272.1| - 0.12 11.6 0.0 0.21 10.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) Roc PF08477.13 gi|15920603|ref|NP_376272.1| - 0.12 12.6 0.1 0.26 11.5 0.1 1.5 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase SRP54 PF00448.22 gi|15920603|ref|NP_376272.1| - 0.13 11.9 0.5 17 5.0 0.0 2.3 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain TraG-D_C PF12696.7 gi|15920603|ref|NP_376272.1| - 0.15 12.1 0.0 0.44 10.6 0.0 1.8 1 1 0 1 1 1 0 TraM recognition site of TraD and TraG CbiA PF01656.23 gi|15920603|ref|NP_376272.1| - 0.15 12.1 0.2 0.31 11.1 0.2 1.6 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain DEAD PF00270.29 gi|15920604|ref|NP_376273.1| - 2.2e-33 115.5 0.1 1.5e-32 112.8 0.0 2.1 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|15920604|ref|NP_376273.1| - 1.5e-21 76.8 2.4 1.9e-19 70.1 0.5 3.3 3 0 0 3 3 3 1 Helicase conserved C-terminal domain DEAD_assoc PF08494.11 gi|15920604|ref|NP_376273.1| - 1.4e-17 64.1 0.0 3.4e-17 62.9 0.0 1.7 1 0 0 1 1 1 1 DEAD/H associated AAA_19 PF13245.6 gi|15920604|ref|NP_376273.1| - 0.0006 20.2 0.0 0.0031 17.9 0.0 2.2 2 0 0 2 2 2 1 AAA domain PrpR_N PF06506.11 gi|15920604|ref|NP_376273.1| - 0.0058 16.2 0.1 0.019 14.5 0.1 1.9 1 0 0 1 1 1 1 Propionate catabolism activator HypA PF01155.19 gi|15920604|ref|NP_376273.1| - 0.0064 16.5 0.0 0.017 15.2 0.0 1.7 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ResIII PF04851.15 gi|15920604|ref|NP_376273.1| - 0.013 15.5 0.0 0.031 14.3 0.0 1.6 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit DUF1451 PF07295.11 gi|15920604|ref|NP_376273.1| - 0.05 13.7 0.9 0.11 12.5 0.1 1.9 2 0 0 2 2 2 0 Zinc-ribbon containing domain UPF0113_N PF17833.1 gi|15920604|ref|NP_376273.1| - 0.061 13.9 1.0 1.1 9.8 0.3 3.1 2 0 0 2 2 2 0 UPF0113 Pre-PUA domain TF_Zn_Ribbon PF08271.12 gi|15920604|ref|NP_376273.1| - 0.48 10.0 1.9 0.56 9.8 0.1 2.1 2 0 0 2 2 2 0 TFIIB zinc-binding KOW PF00467.29 gi|15920605|ref|NP_376274.1| - 0.00039 20.3 0.6 0.00039 20.3 0.6 1.7 2 0 0 2 2 2 1 KOW motif Ribosomal_L14e PF01929.17 gi|15920605|ref|NP_376274.1| - 0.0018 18.8 0.0 0.0025 18.3 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein L14 XisI PF08869.11 gi|15920605|ref|NP_376274.1| - 0.0035 17.7 0.1 0.004 17.5 0.1 1.1 1 0 0 1 1 1 1 XisI protein DKCLD PF08068.12 gi|15920606|ref|NP_376275.1| - 9.7e-13 48.0 0.0 1.2e-12 47.6 0.0 1.1 1 0 0 1 1 1 1 DKCLD (NUC011) domain TypeIII_RM_meth PF12564.8 gi|15920606|ref|NP_376275.1| - 0.15 12.2 1.2 0.24 11.5 0.6 1.6 2 0 0 2 2 2 0 Type III restriction/modification enzyme methylation subunit TruB_N PF01509.18 gi|15920606|ref|NP_376275.1| - 0.18 12.2 0.0 0.26 11.6 0.0 1.3 1 0 0 1 1 1 0 TruB family pseudouridylate synthase (N terminal domain) TruB_C_2 PF16198.5 gi|15920607|ref|NP_376276.1| - 2e-25 88.7 0.1 4.8e-25 87.5 0.1 1.6 1 0 0 1 1 1 1 tRNA pseudouridylate synthase B C-terminal domain PUA PF01472.20 gi|15920607|ref|NP_376276.1| - 3.5e-20 71.7 0.4 5.7e-20 71.1 0.4 1.4 1 0 0 1 1 1 1 PUA domain TruB_N PF01509.18 gi|15920607|ref|NP_376276.1| - 7.5e-07 29.6 0.1 3.4e-05 24.2 0.1 2.6 1 1 0 1 1 1 1 TruB family pseudouridylate synthase (N terminal domain) MTS PF05175.14 gi|15920608|ref|NP_376277.1| - 2.3e-34 118.4 0.0 2.7e-34 118.2 0.0 1.0 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_18 PF12847.7 gi|15920608|ref|NP_376277.1| - 5e-10 39.5 0.0 1.1e-09 38.4 0.0 1.6 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|15920608|ref|NP_376277.1| - 2.4e-08 33.9 0.0 3.3e-08 33.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|15920608|ref|NP_376277.1| - 3.7e-07 29.8 0.0 4.8e-07 29.5 0.0 1.2 1 1 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_12 PF08242.12 gi|15920608|ref|NP_376277.1| - 8.4e-07 29.7 0.0 1.3e-06 29.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_4 PF02390.17 gi|15920608|ref|NP_376277.1| - 1e-06 28.3 0.1 1.8e-06 27.5 0.1 1.3 1 0 0 1 1 1 1 Putative methyltransferase Methyltransf_15 PF09445.10 gi|15920608|ref|NP_376277.1| - 1.2e-05 24.9 0.1 2.4e-05 24.0 0.1 1.7 1 1 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Methyltransf_25 PF13649.6 gi|15920608|ref|NP_376277.1| - 1.4e-05 25.7 0.0 1.9e-05 25.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 gi|15920608|ref|NP_376277.1| - 1.7e-05 24.6 0.2 2.1e-05 24.4 0.2 1.2 1 0 0 1 1 1 1 Met-10+ like-protein GidB PF02527.15 gi|15920608|ref|NP_376277.1| - 2e-05 24.0 0.1 3.9e-05 23.1 0.1 1.6 1 1 0 1 1 1 1 rRNA small subunit methyltransferase G Methyltransf_16 PF10294.9 gi|15920608|ref|NP_376277.1| - 0.00067 19.4 0.0 0.001 18.8 0.0 1.3 1 0 0 1 1 1 1 Lysine methyltransferase Cons_hypoth95 PF03602.15 gi|15920608|ref|NP_376277.1| - 0.0012 18.5 0.0 0.0014 18.3 0.0 1.1 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_23 PF13489.6 gi|15920608|ref|NP_376277.1| - 0.0026 17.6 0.0 0.0042 16.9 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain TrmK PF04816.12 gi|15920608|ref|NP_376277.1| - 0.012 15.2 0.1 0.018 14.6 0.1 1.3 1 0 0 1 1 1 0 tRNA (adenine(22)-N(1))-methyltransferase Methyltransf_11 PF08241.12 gi|15920608|ref|NP_376277.1| - 0.019 15.6 0.0 0.035 14.7 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_5 PF01795.19 gi|15920608|ref|NP_376277.1| - 0.037 13.5 0.0 0.086 12.3 0.0 1.5 2 0 0 2 2 2 0 MraW methylase family UPF0020 PF01170.18 gi|15920608|ref|NP_376277.1| - 0.056 13.1 0.1 0.076 12.7 0.1 1.3 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 CMAS PF02353.20 gi|15920608|ref|NP_376277.1| - 0.074 12.3 0.0 0.12 11.7 0.0 1.4 1 1 0 1 1 1 0 Mycolic acid cyclopropane synthetase Methyltransf_32 PF13679.6 gi|15920608|ref|NP_376277.1| - 0.11 12.5 0.0 0.14 12.2 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain rRNA_methylase PF06962.12 gi|15920608|ref|NP_376277.1| - 0.11 12.5 0.0 18 5.3 0.0 2.2 2 0 0 2 2 2 0 Putative rRNA methylase Glycos_transf_1 PF00534.20 gi|15920609|ref|NP_376278.1| - 1.2e-23 83.5 0.0 2e-23 82.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|15920609|ref|NP_376278.1| - 1.7e-09 38.2 0.0 2.7e-09 37.6 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|15920609|ref|NP_376278.1| - 0.0002 21.7 0.0 0.00034 21.0 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|15920609|ref|NP_376278.1| - 0.029 14.3 0.0 0.083 12.9 0.0 1.9 2 1 0 2 2 2 0 Glycosyltransferase Family 4 SSV1_ORF_D-335 PF07935.11 gi|15920611|ref|NP_376280.1| - 7.1e-37 125.5 4.3 8.2e-37 125.3 4.3 1.0 1 0 0 1 1 1 1 ORF D-335-like protein Archease PF01951.16 gi|15920612|ref|NP_376281.1| - 4.6e-46 156.5 0.4 5.1e-46 156.4 0.4 1.0 1 0 0 1 1 1 1 Archease protein family (MTH1598/TM1083) GrpE PF01025.19 gi|15920612|ref|NP_376281.1| - 0.02 14.5 0.3 0.59 9.8 0.1 2.0 2 0 0 2 2 2 0 GrpE Cytidylate_kin2 PF13189.6 gi|15920615|ref|NP_376284.1| - 4.8e-21 75.7 0.4 2.6e-19 70.1 0.4 2.0 1 1 0 1 1 1 1 Cytidylate kinase-like family AAA_18 PF13238.6 gi|15920615|ref|NP_376284.1| - 8.4e-20 71.6 0.1 1.1e-19 71.3 0.1 1.2 1 0 0 1 1 1 1 AAA domain Cytidylate_kin PF02224.18 gi|15920615|ref|NP_376284.1| - 3.6e-15 56.3 0.6 9.7e-09 35.3 0.0 2.1 1 1 0 2 2 2 2 Cytidylate kinase AAA_17 PF13207.6 gi|15920615|ref|NP_376284.1| - 4.4e-14 53.1 0.1 8e-14 52.2 0.1 1.5 1 1 0 1 1 1 1 AAA domain SKI PF01202.22 gi|15920615|ref|NP_376284.1| - 1.6e-08 34.8 0.7 3.5e-08 33.7 0.7 1.6 1 1 0 1 1 1 1 Shikimate kinase dNK PF01712.19 gi|15920615|ref|NP_376284.1| - 4.6e-07 29.9 0.8 0.0023 17.8 0.0 2.3 1 1 0 2 2 2 2 Deoxynucleoside kinase CoaE PF01121.20 gi|15920615|ref|NP_376284.1| - 9.2e-07 28.7 0.1 0.00023 20.9 0.0 2.2 1 1 1 2 2 2 1 Dephospho-CoA kinase ADK PF00406.22 gi|15920615|ref|NP_376284.1| - 1.1e-06 28.8 0.0 3.2e-06 27.3 0.0 1.8 1 1 1 2 2 2 1 Adenylate kinase AAA_33 PF13671.6 gi|15920615|ref|NP_376284.1| - 6.3e-06 26.4 0.0 0.00038 20.6 0.0 2.1 2 0 0 2 2 2 1 AAA domain Rad17 PF03215.15 gi|15920615|ref|NP_376284.1| - 7.7e-06 26.0 0.0 1.1e-05 25.4 0.0 1.4 1 0 0 1 1 1 1 Rad17 P-loop domain PRK PF00485.18 gi|15920615|ref|NP_376284.1| - 0.00012 21.9 0.4 0.07 12.9 0.0 2.2 1 1 1 2 2 2 2 Phosphoribulokinase / Uridine kinase family AAA PF00004.29 gi|15920615|ref|NP_376284.1| - 0.00023 21.6 0.0 0.00041 20.8 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 gi|15920615|ref|NP_376284.1| - 0.00024 21.4 0.0 0.00034 20.9 0.0 1.6 1 1 0 1 1 1 1 AAA domain KTI12 PF08433.10 gi|15920615|ref|NP_376284.1| - 0.00061 19.3 0.2 0.0011 18.5 0.1 1.6 1 1 0 1 1 1 1 Chromatin associated protein KTI12 AAA_22 PF13401.6 gi|15920615|ref|NP_376284.1| - 0.00083 19.6 0.0 0.0011 19.2 0.0 1.4 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 gi|15920615|ref|NP_376284.1| - 0.0012 19.4 0.5 0.0013 19.3 0.5 1.4 1 1 0 1 1 1 1 ABC transporter RNA_helicase PF00910.22 gi|15920615|ref|NP_376284.1| - 0.0014 19.0 0.0 0.0026 18.1 0.0 1.6 1 0 0 1 1 1 1 RNA helicase AAA_15 PF13175.6 gi|15920615|ref|NP_376284.1| - 0.0015 18.4 1.9 0.0016 18.2 1.9 1.1 1 0 0 1 1 1 1 AAA ATPase domain AAA_16 PF13191.6 gi|15920615|ref|NP_376284.1| - 0.0018 18.7 0.1 0.0024 18.3 0.1 1.6 1 1 0 1 1 1 1 AAA ATPase domain Thymidylate_kin PF02223.17 gi|15920615|ref|NP_376284.1| - 0.0026 17.5 1.2 1.8 8.2 0.0 3.0 2 1 1 3 3 3 1 Thymidylate kinase NTPase_1 PF03266.15 gi|15920615|ref|NP_376284.1| - 0.003 17.5 0.0 0.0064 16.4 0.0 1.6 1 1 0 1 1 1 1 NTPase RuvB_N PF05496.12 gi|15920615|ref|NP_376284.1| - 0.0034 17.1 0.0 0.0054 16.5 0.0 1.4 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_10 PF12846.7 gi|15920615|ref|NP_376284.1| - 0.013 14.5 0.3 0.25 10.2 0.3 2.2 1 1 0 1 1 1 0 AAA-like domain APS_kinase PF01583.20 gi|15920615|ref|NP_376284.1| - 0.013 15.4 0.0 0.026 14.4 0.0 1.5 2 0 0 2 2 1 0 Adenylylsulphate kinase AAA_14 PF13173.6 gi|15920615|ref|NP_376284.1| - 0.019 15.0 0.1 0.049 13.7 0.1 1.7 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 gi|15920615|ref|NP_376284.1| - 0.019 14.0 2.1 0.068 12.2 0.2 2.0 1 1 1 2 2 2 0 Type II/IV secretion system protein Zeta_toxin PF06414.12 gi|15920615|ref|NP_376284.1| - 0.019 14.2 0.1 0.034 13.4 0.1 1.4 1 0 0 1 1 1 0 Zeta toxin ATPase_2 PF01637.18 gi|15920615|ref|NP_376284.1| - 0.02 14.8 1.7 0.039 13.9 0.4 1.8 1 1 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_30 PF13604.6 gi|15920615|ref|NP_376284.1| - 0.038 13.7 0.1 0.39 10.4 0.1 2.2 1 1 1 2 2 2 0 AAA domain AAA_5 PF07728.14 gi|15920615|ref|NP_376284.1| - 0.042 13.8 0.0 0.091 12.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA_24 PF13479.6 gi|15920615|ref|NP_376284.1| - 0.045 13.5 0.4 0.11 12.2 0.1 1.7 2 0 0 2 2 2 0 AAA domain Viral_helicase1 PF01443.18 gi|15920615|ref|NP_376284.1| - 0.055 13.2 0.0 0.074 12.8 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase Rubrerythrin PF02915.17 gi|15920615|ref|NP_376284.1| - 0.064 13.7 2.1 0.13 12.6 2.1 1.5 1 1 0 1 1 1 0 Rubrerythrin Mg_chelatase PF01078.21 gi|15920615|ref|NP_376284.1| - 0.089 12.2 0.0 0.15 11.5 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_29 PF13555.6 gi|15920615|ref|NP_376284.1| - 0.14 11.9 0.2 0.28 10.9 0.2 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain ParA PF10609.9 gi|15920615|ref|NP_376284.1| - 0.14 11.6 0.0 0.2 11.1 0.0 1.3 1 0 0 1 1 1 0 NUBPL iron-transfer P-loop NTPase Ribosomal_L34e PF01199.18 gi|15920616|ref|NP_376285.1| - 1.5e-18 66.8 4.5 1.9e-18 66.5 4.5 1.1 1 0 0 1 1 1 1 Ribosomal protein L34e Gin PF10764.9 gi|15920616|ref|NP_376285.1| - 0.0023 17.9 0.3 0.13 12.2 0.0 2.4 2 0 0 2 2 2 1 Inhibitor of sigma-G Gin zf-C3HC4_3 PF13920.6 gi|15920616|ref|NP_376285.1| - 0.012 15.5 1.2 3 7.8 0.2 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) NinF PF05810.12 gi|15920616|ref|NP_376285.1| - 0.029 14.2 0.2 0.091 12.6 0.0 1.8 2 0 0 2 2 2 0 NinF protein zf-C4pol PF14260.6 gi|15920616|ref|NP_376285.1| - 0.033 14.6 0.2 0.044 14.3 0.2 1.3 1 0 0 1 1 1 0 C4-type zinc-finger of DNA polymerase delta zf-P11 PF03854.14 gi|15920616|ref|NP_376285.1| - 0.038 13.7 1.4 1.9 8.2 0.1 2.3 2 0 0 2 2 2 0 P-11 zinc finger Prim_Zn_Ribbon PF08273.12 gi|15920616|ref|NP_376285.1| - 0.07 13.4 0.1 0.62 10.4 0.0 2.0 2 0 0 2 2 2 0 Zinc-binding domain of primase-helicase Zn_ribbon_SprT PF17283.2 gi|15920616|ref|NP_376285.1| - 0.16 11.9 3.9 0.99 9.4 0.4 2.4 2 0 0 2 2 2 0 SprT-like zinc ribbon domain Synaptobrevin PF00957.21 gi|15920617|ref|NP_376286.1| - 0.1 12.4 0.2 0.1 12.4 0.2 1.8 3 0 0 3 3 3 0 Synaptobrevin AAA_17 PF13207.6 gi|15920618|ref|NP_376287.1| - 3e-35 121.6 0.1 3.7e-35 121.3 0.1 1.1 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|15920618|ref|NP_376287.1| - 1.3e-07 32.2 0.0 1.8e-07 31.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain Thymidylate_kin PF02223.17 gi|15920618|ref|NP_376287.1| - 5.7e-05 22.9 0.1 0.068 12.8 0.1 2.3 2 0 0 2 2 2 2 Thymidylate kinase SRP54 PF00448.22 gi|15920618|ref|NP_376287.1| - 0.0001 22.0 0.0 0.00014 21.6 0.0 1.2 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain AAA_22 PF13401.6 gi|15920618|ref|NP_376287.1| - 0.00012 22.4 0.0 0.00017 21.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain ATP_bind_1 PF03029.17 gi|15920618|ref|NP_376287.1| - 0.00015 21.6 0.0 0.00025 20.9 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein NTPase_1 PF03266.15 gi|15920618|ref|NP_376287.1| - 0.00019 21.4 0.8 0.00035 20.5 0.8 1.3 1 0 0 1 1 1 1 NTPase AAA_30 PF13604.6 gi|15920618|ref|NP_376287.1| - 0.00034 20.4 0.1 0.00059 19.6 0.1 1.4 1 0 0 1 1 1 1 AAA domain KTI12 PF08433.10 gi|15920618|ref|NP_376287.1| - 0.00099 18.6 0.1 0.0013 18.2 0.1 1.2 1 0 0 1 1 1 1 Chromatin associated protein KTI12 AAA_16 PF13191.6 gi|15920618|ref|NP_376287.1| - 0.0019 18.6 0.0 0.0024 18.3 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_28 PF13521.6 gi|15920618|ref|NP_376287.1| - 0.0027 18.0 0.0 0.0068 16.7 0.0 1.7 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.6 gi|15920618|ref|NP_376287.1| - 0.0076 16.6 0.0 0.011 16.1 0.0 1.4 1 0 0 1 1 1 1 AAA domain MeaB PF03308.16 gi|15920618|ref|NP_376287.1| - 0.0091 15.0 0.1 0.014 14.4 0.1 1.3 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB DUF2075 PF09848.9 gi|15920618|ref|NP_376287.1| - 0.035 13.3 0.2 0.045 13.0 0.2 1.2 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_33 PF13671.6 gi|15920618|ref|NP_376287.1| - 0.05 13.8 0.4 0.22 11.7 0.4 2.0 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 gi|15920618|ref|NP_376287.1| - 0.052 14.0 1.2 0.18 12.2 1.2 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_14 PF13173.6 gi|15920618|ref|NP_376287.1| - 0.065 13.3 0.5 0.15 12.1 0.5 1.7 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|15920618|ref|NP_376287.1| - 0.065 13.1 0.0 0.08 12.9 0.0 1.3 1 0 0 1 1 1 0 NACHT domain PRK PF00485.18 gi|15920618|ref|NP_376287.1| - 0.075 12.8 0.0 0.11 12.2 0.0 1.2 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family cobW PF02492.19 gi|15920618|ref|NP_376287.1| - 0.089 12.4 0.1 0.15 11.6 0.1 1.4 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_25 PF13481.6 gi|15920618|ref|NP_376287.1| - 0.093 12.3 0.7 1.4 8.4 0.3 2.2 2 0 0 2 2 2 0 AAA domain Viral_helicase1 PF01443.18 gi|15920618|ref|NP_376287.1| - 0.14 11.9 0.0 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase SecY PF00344.20 gi|15920619|ref|NP_376288.1| - 6.9e-57 193.0 30.5 9.8e-57 192.5 30.5 1.2 1 0 0 1 1 1 1 SecY translocase Plug_translocon PF10559.9 gi|15920619|ref|NP_376288.1| - 2.1e-08 33.8 0.4 8.8e-08 31.9 0.4 2.2 1 0 0 1 1 1 1 Plug domain of Sec61p Ribosomal_L27A PF00828.19 gi|15920620|ref|NP_376289.1| - 6.9e-15 55.9 6.4 1.9e-14 54.4 6.4 1.6 1 1 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_L30 PF00327.20 gi|15920621|ref|NP_376290.1| - 8.5e-15 54.4 0.0 2e-14 53.2 0.0 1.7 1 0 0 1 1 1 1 Ribosomal protein L30p/L7e Ribosomal_S5 PF00333.20 gi|15920622|ref|NP_376291.1| - 1.6e-22 79.3 3.7 1.7e-22 79.2 1.5 1.9 2 0 0 2 2 2 1 Ribosomal protein S5, N-terminal domain Ribosomal_S5_C PF03719.15 gi|15920622|ref|NP_376291.1| - 7.3e-20 70.2 0.0 1.9e-19 68.9 0.0 1.7 2 0 0 2 2 2 1 Ribosomal protein S5, C-terminal domain Lipoprotein_3 PF00938.17 gi|15920622|ref|NP_376291.1| - 0.0054 16.9 0.0 0.013 15.7 0.0 1.6 1 0 0 1 1 1 1 Lipoprotein Ribosomal_L5e PF17144.4 gi|15920623|ref|NP_376292.1| - 4.3e-31 108.1 5.4 5.1e-24 85.1 2.7 2.3 1 1 1 2 2 2 2 Ribosomal large subunit proteins 60S L5, and 50S L18 Ribosomal_L18_c PF14204.6 gi|15920623|ref|NP_376292.1| - 3.6e-10 40.6 0.0 7.1e-10 39.7 0.0 1.4 1 0 0 1 1 1 1 Ribosomal L18 C-terminal region Ribosomal_L18p PF00861.22 gi|15920623|ref|NP_376292.1| - 1e-05 25.9 0.0 1.4e-05 25.4 0.0 1.2 1 0 0 1 1 1 1 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast Ribosomal_L19e PF01280.20 gi|15920624|ref|NP_376293.1| - 9.6e-47 158.7 12.7 1.1e-46 158.5 12.7 1.0 1 0 0 1 1 1 1 Ribosomal protein L19e DUF4258 PF14076.6 gi|15920624|ref|NP_376293.1| - 0.085 13.3 0.1 0.14 12.5 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4258) DUF910 PF06014.11 gi|15920624|ref|NP_376293.1| - 0.11 12.6 1.5 20 5.3 0.0 3.1 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF910) Ribosomal_L32e PF01655.18 gi|15920625|ref|NP_376294.1| - 4.7e-34 117.1 0.1 6.6e-34 116.6 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L32 SinI PF08671.10 gi|15920625|ref|NP_376294.1| - 0.15 11.9 0.7 0.36 10.6 0.7 1.7 1 0 0 1 1 1 0 Anti-repressor SinI Ribosomal_L6 PF00347.23 gi|15920626|ref|NP_376295.1| - 1.9e-29 102.2 12.7 3.5e-16 59.6 2.3 2.1 2 0 0 2 2 2 2 Ribosomal protein L6 TSCPD PF12637.7 gi|15920626|ref|NP_376295.1| - 0.062 13.6 2.3 0.39 11.0 0.8 2.2 2 0 0 2 2 2 0 TSCPD domain DUF4469 PF14734.6 gi|15920626|ref|NP_376295.1| - 0.5 10.6 6.4 6.5 7.0 0.6 2.7 2 2 0 2 2 2 0 Domain of unknown function (DUF4469) with IG-like fold Ribosomal_S8 PF00410.19 gi|15920627|ref|NP_376296.1| - 1e-24 86.9 0.4 2.5e-24 85.6 0.4 1.6 1 1 0 1 1 1 1 Ribosomal protein S8 Ribosomal_S14 PF00253.21 gi|161751099|ref|NP_376297.2| - 5.8e-12 45.2 3.7 6.6e-12 45.0 3.7 1.0 1 0 0 1 1 1 1 Ribosomal protein S14p/S29e Prim_Zn_Ribbon PF08273.12 gi|161751099|ref|NP_376297.2| - 0.003 17.8 0.6 0.13 12.6 0.1 2.1 2 0 0 2 2 2 1 Zinc-binding domain of primase-helicase zf-FPG_IleRS PF06827.14 gi|161751099|ref|NP_376297.2| - 0.012 15.5 3.5 0.017 14.9 3.5 1.3 1 0 0 1 1 1 0 Zinc finger found in FPG and IleRS Zn_Tnp_IS1595 PF12760.7 gi|161751099|ref|NP_376297.2| - 0.029 14.4 2.7 0.037 14.0 2.7 1.2 1 0 0 1 1 1 0 Transposase zinc-ribbon domain DZR PF12773.7 gi|161751099|ref|NP_376297.2| - 0.03 14.3 0.2 0.038 14.0 0.2 1.2 1 0 0 1 1 1 0 Double zinc ribbon zf-CCHC_2 PF13696.6 gi|161751099|ref|NP_376297.2| - 0.63 9.9 4.8 2.4 8.1 0.3 2.2 2 0 0 2 2 2 0 Zinc knuckle Ribosomal_L5_C PF00673.21 gi|15920629|ref|NP_376298.1| - 4.3e-27 94.1 0.1 1.5e-26 92.4 0.0 1.9 2 1 0 2 2 2 1 ribosomal L5P family C-terminus Ribosomal_L5 PF00281.19 gi|15920629|ref|NP_376298.1| - 1e-21 77.0 0.0 2.1e-21 76.0 0.0 1.6 1 0 0 1 1 1 1 Ribosomal protein L5 DUF5532 PF17673.1 gi|15920629|ref|NP_376298.1| - 0.098 12.7 0.1 2.3 8.3 0.0 2.3 3 0 0 3 3 3 0 Family of unknown function (DUF5532) Ribosomal_S4e PF00900.20 gi|161751098|ref|NP_376299.2| - 4.5e-23 80.9 0.8 4.5e-23 80.9 0.8 1.9 2 0 0 2 2 2 1 Ribosomal family S4e S4 PF01479.25 gi|161751098|ref|NP_376299.2| - 1.8e-11 43.6 0.0 3.9e-11 42.5 0.0 1.7 1 0 0 1 1 1 1 S4 domain RS4NT PF08071.12 gi|161751098|ref|NP_376299.2| - 2.6e-07 30.6 0.6 5e-07 29.7 0.6 1.4 1 0 0 1 1 1 1 RS4NT (NUC023) domain S4_2 PF13275.6 gi|161751098|ref|NP_376299.2| - 0.0061 16.4 0.0 0.013 15.3 0.0 1.6 1 0 0 1 1 1 1 S4 domain KOW PF00467.29 gi|161751098|ref|NP_376299.2| - 0.069 13.1 0.4 0.19 11.7 0.4 1.8 1 0 0 1 1 1 0 KOW motif DUF4988 PF16378.5 gi|161751098|ref|NP_376299.2| - 0.076 12.7 3.1 0.27 10.9 0.2 2.3 1 1 1 2 2 2 0 Domain of unknown function Ribosomal_L26 PF16906.5 gi|15920631|ref|NP_376300.1| - 1e-14 54.7 0.6 1.7e-14 54.0 0.6 1.3 1 0 0 1 1 1 1 Ribosomal proteins L26 eukaryotic, L24P archaeal Ribosomal_L14 PF00238.19 gi|15920632|ref|NP_376301.1| - 1.4e-36 125.3 0.1 1.7e-36 125.0 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein L14p/L23e PAS_3 PF08447.12 gi|15920632|ref|NP_376301.1| - 0.053 13.8 0.0 0.082 13.2 0.0 1.3 1 0 0 1 1 1 0 PAS fold Ribosomal_S17 PF00366.20 gi|15920633|ref|NP_376302.1| - 3e-22 78.5 0.1 4.1e-22 78.1 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein S17 Ribosomal_S17_N PF16205.5 gi|15920633|ref|NP_376302.1| - 0.018 15.4 0.1 0.034 14.5 0.1 1.5 1 0 0 1 1 1 0 Ribosomal_S17 N-terminal Ribosomal_L29 PF00831.23 gi|15920634|ref|NP_376303.1| - 9.3e-13 47.9 7.0 9.3e-13 47.9 7.0 2.4 2 1 0 2 2 2 1 Ribosomal L29 protein DUF4698 PF15769.5 gi|15920634|ref|NP_376303.1| - 0.0074 15.4 1.6 0.0082 15.2 1.6 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4698) Terminase_GpA PF05876.12 gi|15920634|ref|NP_376303.1| - 0.023 13.3 0.1 0.026 13.1 0.1 1.0 1 0 0 1 1 1 0 Phage terminase large subunit (GpA) DHR10 PF18595.1 gi|15920634|ref|NP_376303.1| - 0.1 12.6 9.1 1.2 9.2 0.3 2.1 1 1 1 2 2 2 0 Designed helical repeat protein 10 domain Nas2_N PF18265.1 gi|15920634|ref|NP_376303.1| - 1.4 8.9 8.2 1.5e+02 2.3 8.2 2.3 1 1 0 1 1 1 0 Nas2 N_terminal domain Vps51 PF08700.11 gi|15920634|ref|NP_376303.1| - 1.4 9.0 8.2 4.4 7.5 7.7 2.0 1 1 0 1 1 1 0 Vps51/Vps67 FlxA PF14282.6 gi|15920634|ref|NP_376303.1| - 3.1 7.8 12.0 2.4 8.2 5.9 2.1 1 1 1 2 2 2 0 FlxA-like protein Ribosomal_S3_C PF00189.20 gi|15920635|ref|NP_376304.1| - 3e-22 78.9 1.1 4.7e-22 78.3 0.6 1.6 2 0 0 2 2 2 1 Ribosomal protein S3, C-terminal domain KH_2 PF07650.17 gi|15920635|ref|NP_376304.1| - 2.4e-15 56.1 0.0 4.7e-15 55.2 0.0 1.5 1 0 0 1 1 1 1 KH domain KH_1 PF00013.29 gi|15920635|ref|NP_376304.1| - 0.049 13.5 3.2 0.055 13.3 0.2 2.6 3 0 0 3 3 3 0 KH domain Ribosomal_L22 PF00237.19 gi|15920636|ref|NP_376305.1| - 2.5e-28 98.3 0.4 3.9e-28 97.7 0.4 1.3 1 1 0 1 1 1 1 Ribosomal protein L22p/L17e Cytokin-bind PF09265.10 gi|15920636|ref|NP_376305.1| - 0.0069 15.8 0.0 0.011 15.1 0.0 1.3 1 0 0 1 1 1 1 Cytokinin dehydrogenase 1, FAD and cytokinin binding Phe_tRNA-synt_N PF02912.18 gi|15920636|ref|NP_376305.1| - 0.0071 16.3 1.3 0.0086 16.0 0.1 1.7 3 0 0 3 3 3 1 Aminoacyl tRNA synthetase class II, N-terminal domain Ribosomal_S19 PF00203.21 gi|15920637|ref|NP_376306.1| - 6.4e-33 112.5 1.1 8.3e-33 112.1 1.1 1.1 1 0 0 1 1 1 1 Ribosomal protein S19 Myb_DNA-bind_7 PF15963.5 gi|15920637|ref|NP_376306.1| - 0.085 12.8 0.6 0.14 12.1 0.6 1.3 1 0 0 1 1 1 0 Myb DNA-binding like Ribosomal_L2_C PF03947.18 gi|161751097|ref|NP_376307.2| - 4.1e-43 146.6 4.8 8.3e-43 145.6 4.8 1.5 1 0 0 1 1 1 1 Ribosomal Proteins L2, C-terminal domain Ribosomal_L2 PF00181.23 gi|161751097|ref|NP_376307.2| - 7.8e-15 54.6 0.1 2.3e-14 53.1 0.1 1.8 1 0 0 1 1 1 1 Ribosomal Proteins L2, RNA binding domain PRC PF05239.16 gi|161751097|ref|NP_376307.2| - 0.0016 18.5 0.9 0.0032 17.5 0.2 1.9 2 0 0 2 2 2 1 PRC-barrel domain UCR_UQCRX_QCR9 PF05365.12 gi|161751097|ref|NP_376307.2| - 0.13 12.2 0.0 0.22 11.5 0.0 1.3 1 0 0 1 1 1 0 Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like Ribosomal_L23 PF00276.20 gi|15920639|ref|NP_376308.1| - 6.6e-14 52.0 11.3 7.9e-13 48.6 11.3 1.9 1 1 0 1 1 1 1 Ribosomal protein L23 TusA PF01206.17 gi|15920639|ref|NP_376308.1| - 0.00065 19.5 1.1 0.0012 18.6 0.6 1.6 2 0 0 2 2 2 1 Sulfurtransferase TusA ASL_C PF08328.11 gi|15920639|ref|NP_376308.1| - 0.014 15.4 0.6 0.015 15.3 0.6 1.1 1 0 0 1 1 1 0 Adenylosuccinate lyase C-terminal Ubiquitin_4 PF18036.1 gi|15920639|ref|NP_376308.1| - 0.019 15.0 1.2 0.026 14.6 0.9 1.4 1 1 0 1 1 1 0 Ubiquitin-like domain DUF2551 PF10826.8 gi|15920639|ref|NP_376308.1| - 0.039 14.2 1.1 0.069 13.4 1.0 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF2551) Img2 PF05046.14 gi|15920639|ref|NP_376308.1| - 0.16 12.3 1.3 0.18 12.1 1.3 1.2 1 0 0 1 1 1 0 Mitochondrial large subunit ribosomal protein (Img2) Ribosomal_L4 PF00573.22 gi|15920640|ref|NP_376309.1| - 7.9e-40 136.6 0.1 9.4e-40 136.3 0.1 1.1 1 0 0 1 1 1 1 Ribosomal protein L4/L1 family Ribosomal_L3 PF00297.22 gi|15920641|ref|NP_376310.1| - 1.3e-76 258.0 0.0 1.5e-76 257.8 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L3 Synaptonemal_3 PF15191.6 gi|15920641|ref|NP_376310.1| - 0.12 12.2 0.0 0.2 11.4 0.0 1.4 1 0 0 1 1 1 0 Synaptonemal complex central element protein 3 Methyltrn_RNA_3 PF02598.17 gi|15920642|ref|NP_376311.1| - 2.1e-17 63.6 0.0 3.8e-12 46.3 0.1 2.2 2 0 0 2 2 2 2 Putative RNA methyltransferase tRNA-synt_1 PF00133.22 gi|161751096|ref|NP_376312.2| - 6.8e-181 602.6 1.3 9.1e-181 602.2 1.3 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|161751096|ref|NP_376312.2| - 3.6e-32 111.4 0.7 3.6e-32 111.4 0.7 1.8 2 0 0 2 2 2 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|161751096|ref|NP_376312.2| - 2.4e-19 69.4 0.8 3e-07 29.6 0.0 4.3 3 1 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1_2 PF13603.6 gi|161751096|ref|NP_376312.2| - 4.7e-05 23.0 0.3 0.00042 19.9 0.1 2.4 2 0 0 2 2 2 1 Leucyl-tRNA synthetase, Domain 2 Rpr2 PF04032.16 gi|161751096|ref|NP_376312.2| - 0.0021 18.3 1.4 0.0062 16.8 0.2 2.4 3 0 0 3 3 3 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain Nse4-Nse3_bdg PF15412.6 gi|161751096|ref|NP_376312.2| - 0.046 13.8 0.6 0.31 11.2 0.0 2.5 2 0 0 2 2 2 0 Binding domain of Nse4/EID3 to Nse3-MAGE NID PF07292.13 gi|161751096|ref|NP_376312.2| - 0.048 14.3 4.5 0.096 13.3 0.7 2.5 2 0 0 2 2 2 0 Nmi/IFP 35 domain (NID) APG12 PF04110.13 gi|161751096|ref|NP_376312.2| - 0.079 13.4 0.4 0.66 10.4 0.0 2.5 2 0 0 2 2 2 0 Ubiquitin-like autophagy protein Apg12 zf-TFIIB PF13453.6 gi|161751096|ref|NP_376312.2| - 0.9 8.9 2.4 7.6 6.0 0.0 3.2 3 0 0 3 3 3 0 Transcription factor zinc-finger Iso_dh PF00180.20 gi|15920644|ref|NP_376313.1| - 3.8e-92 309.1 0.7 4.5e-92 308.9 0.7 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase DUF447 PF04289.12 gi|15920645|ref|NP_376314.1| - 3e-41 141.1 0.0 3.4e-41 140.9 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF447) GAPES1 PF17155.4 gi|15920645|ref|NP_376314.1| - 0.072 12.4 3.6 0.65 9.3 1.5 2.1 1 1 1 2 2 2 0 Gammaproteobacterial periplasmic sensor domain Peptidase_M28 PF04389.17 gi|15920646|ref|NP_376315.1| - 1.9e-07 31.0 0.4 5.7e-05 22.9 0.4 2.7 1 1 0 1 1 1 1 Peptidase family M28 HAD_2 PF13419.6 gi|15920647|ref|NP_376316.1| - 1.8e-24 86.8 0.4 4.6e-24 85.5 0.4 1.6 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|15920647|ref|NP_376316.1| - 1e-12 48.8 0.0 7.3e-12 46.0 0.0 2.0 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|15920647|ref|NP_376316.1| - 1.8e-08 34.3 0.0 3.3e-08 33.5 0.0 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like IFT81_CH PF18383.1 gi|15920647|ref|NP_376316.1| - 0.00033 20.9 0.2 0.00064 20.0 0.2 1.6 1 0 0 1 1 1 1 Intraflagellar transport 81 calponin homology domain HAD PF12710.7 gi|15920647|ref|NP_376316.1| - 0.0015 19.0 0.0 0.003 18.0 0.0 1.5 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase PGP_phosphatase PF09419.10 gi|15920647|ref|NP_376316.1| - 0.059 13.0 0.0 10 5.7 0.0 2.3 2 0 0 2 2 2 0 Mitochondrial PGP phosphatase Hydrolase_6 PF13344.6 gi|15920647|ref|NP_376316.1| - 0.085 13.0 0.0 0.88 9.7 0.0 2.3 2 1 0 2 2 2 0 Haloacid dehalogenase-like hydrolase APP_N PF02177.16 gi|15920647|ref|NP_376316.1| - 0.15 12.5 0.0 0.29 11.5 0.0 1.5 1 0 0 1 1 1 0 Amyloid A4 N-terminal heparin-binding GTP_EFTU PF00009.27 gi|15920648|ref|NP_376317.1| - 3e-62 209.6 0.2 5.5e-62 208.8 0.2 1.4 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain EFG_IV PF03764.18 gi|15920648|ref|NP_376317.1| - 3e-30 104.5 0.1 2.4e-29 101.6 0.0 2.5 1 1 1 2 2 2 1 Elongation factor G, domain IV EFG_II PF14492.6 gi|15920648|ref|NP_376317.1| - 1.5e-23 82.7 0.0 3.7e-23 81.4 0.0 1.8 1 0 0 1 1 1 1 Elongation Factor G, domain II EFG_C PF00679.24 gi|15920648|ref|NP_376317.1| - 1.6e-23 82.6 0.0 4.2e-23 81.2 0.0 1.8 1 0 0 1 1 1 1 Elongation factor G C-terminus GTP_EFTU_D2 PF03144.25 gi|15920648|ref|NP_376317.1| - 6e-14 52.2 0.0 3e-13 49.9 0.0 2.3 2 0 0 2 2 2 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|15920648|ref|NP_376317.1| - 0.00026 21.1 0.2 0.00063 19.8 0.2 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase CdiA_C PF18451.1 gi|15920648|ref|NP_376317.1| - 0.008 16.4 1.9 0.02 15.1 1.9 1.7 1 0 0 1 1 1 1 Contact-dependent growth inhibition CdiA C-terminal domain HIGH_NTase1_ass PF16581.5 gi|15920648|ref|NP_376317.1| - 0.013 15.5 0.1 0.035 14.1 0.1 1.6 1 0 0 1 1 1 0 Cytidyltransferase-related C-terminal region RF3_C PF16658.5 gi|15920648|ref|NP_376317.1| - 0.028 14.3 0.0 0.057 13.2 0.0 1.5 1 0 0 1 1 1 0 Class II release factor RF3, C-terminal domain Pyr_redox_2 PF07992.14 gi|15920649|ref|NP_376318.1| - 1.8e-41 142.3 1.7 2.1e-41 142.1 1.7 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|15920649|ref|NP_376318.1| - 2e-21 76.6 0.2 7.3e-18 64.8 0.0 2.1 1 1 1 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|15920649|ref|NP_376318.1| - 2.7e-09 36.6 3.1 2.5e-06 26.9 0.4 3.2 2 1 1 3 3 3 2 FAD binding domain Pyr_redox PF00070.27 gi|15920649|ref|NP_376318.1| - 8.8e-08 32.6 1.6 0.00048 20.6 0.1 3.1 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|15920649|ref|NP_376318.1| - 1e-07 31.9 0.2 5.7e-05 22.8 0.3 2.4 2 0 0 2 2 2 2 FAD dependent oxidoreductase Thi4 PF01946.17 gi|15920649|ref|NP_376318.1| - 3.9e-06 26.3 0.5 0.00011 21.5 0.0 2.4 2 1 0 2 2 2 1 Thi4 family GIDA PF01134.22 gi|15920649|ref|NP_376318.1| - 4.7e-06 25.9 3.3 0.00065 18.9 0.0 2.9 2 1 1 3 3 3 2 Glucose inhibited division protein A FAD_oxidored PF12831.7 gi|15920649|ref|NP_376318.1| - 2.1e-05 24.1 0.2 0.00017 21.1 0.0 2.0 2 0 0 2 2 2 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|15920649|ref|NP_376318.1| - 0.00013 22.1 0.3 0.00032 20.9 0.2 1.7 1 1 0 1 1 1 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 gi|15920649|ref|NP_376318.1| - 0.003 16.3 0.0 0.043 12.5 0.1 2.2 2 0 0 2 2 2 1 HI0933-like protein FAD_binding_3 PF01494.19 gi|15920649|ref|NP_376318.1| - 0.0058 15.9 0.0 0.0081 15.5 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain K_oxygenase PF13434.6 gi|15920649|ref|NP_376318.1| - 0.014 14.6 0.0 3.2 6.8 0.0 3.0 2 1 1 3 3 3 0 L-lysine 6-monooxygenase (NADPH-requiring) Lycopene_cycl PF05834.12 gi|15920649|ref|NP_376318.1| - 0.031 13.3 0.1 0.055 12.5 0.1 1.4 1 0 0 1 1 1 0 Lycopene cyclase protein FMO-like PF00743.19 gi|15920649|ref|NP_376318.1| - 0.2 10.1 1.3 9.6 4.5 0.0 2.7 2 1 1 3 3 3 0 Flavin-binding monooxygenase-like ERCC4 PF02732.15 gi|15920650|ref|NP_376319.1| - 3.6e-25 89.0 0.3 6.6e-25 88.1 0.3 1.4 1 0 0 1 1 1 1 ERCC4 domain HHH_2 PF12826.7 gi|15920650|ref|NP_376319.1| - 3.2e-06 27.1 0.1 1e-05 25.5 0.0 1.9 2 0 0 2 2 2 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|15920650|ref|NP_376319.1| - 1.1e-05 26.0 0.1 4.1e-05 24.1 0.1 2.0 2 0 0 2 2 2 1 Helix-hairpin-helix domain 5_3_exonuc PF01367.20 gi|15920650|ref|NP_376319.1| - 0.00095 19.7 0.4 0.0036 17.9 0.1 2.0 1 1 1 2 2 2 1 5'-3' exonuclease, C-terminal SAM fold IMS_HHH PF11798.8 gi|15920650|ref|NP_376319.1| - 0.058 13.8 0.0 0.17 12.3 0.0 1.8 1 0 0 1 1 1 0 IMS family HHH motif FTO_CTD PF12934.7 gi|15920650|ref|NP_376319.1| - 0.091 12.5 1.3 0.19 11.5 0.9 1.7 1 1 1 2 2 2 0 FTO C-terminal domain Prefoldin_2 PF01920.20 gi|15920651|ref|NP_376320.1| - 1.1e-23 83.2 17.0 1.3e-23 83.0 17.0 1.0 1 0 0 1 1 1 1 Prefoldin subunit Nup54 PF13874.6 gi|15920651|ref|NP_376320.1| - 0.012 15.8 5.1 0.27 11.3 0.5 2.1 2 0 0 2 2 2 0 Nucleoporin complex subunit 54 Gon7 PF08738.10 gi|15920651|ref|NP_376320.1| - 0.033 14.3 9.6 0.39 10.8 0.9 2.4 2 1 0 2 2 2 0 Gon7 family DUF424 PF04242.13 gi|15920651|ref|NP_376320.1| - 0.053 13.8 0.1 0.11 12.7 0.1 1.6 1 1 1 2 2 2 0 Protein of unknown function (DUF424) EAP30 PF04157.16 gi|15920651|ref|NP_376320.1| - 0.074 12.3 4.0 0.18 11.1 4.0 1.5 1 1 0 1 1 1 0 EAP30/Vps36 family APG6_N PF17675.1 gi|15920651|ref|NP_376320.1| - 0.13 12.8 12.6 0.69 10.4 1.4 2.1 2 0 0 2 2 2 0 Apg6 coiled-coil region WXG100 PF06013.12 gi|15920651|ref|NP_376320.1| - 0.19 12.0 2.5 3.8 7.8 0.0 2.7 2 1 1 3 3 3 0 Proteins of 100 residues with WXG Mod_r PF07200.13 gi|15920651|ref|NP_376320.1| - 0.22 11.6 14.8 0.44 10.7 5.0 2.0 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein TPR_MLP1_2 PF07926.12 gi|15920651|ref|NP_376320.1| - 0.29 11.2 13.1 0.36 10.9 5.2 2.1 2 0 0 2 2 2 0 TPR/MLP1/MLP2-like protein CLZ PF16526.5 gi|15920651|ref|NP_376320.1| - 0.66 10.4 11.7 6 7.3 1.1 2.8 2 1 1 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels Gastrin PF00918.17 gi|15920651|ref|NP_376320.1| - 0.71 10.8 3.3 0.39 11.7 0.7 1.8 1 1 1 2 2 2 0 Gastrin/cholecystokinin family MerR-DNA-bind PF09278.11 gi|15920651|ref|NP_376320.1| - 0.72 10.4 12.6 1.2 9.7 2.4 2.8 3 0 0 3 3 3 0 MerR, DNA binding Prefoldin PF02996.17 gi|15920651|ref|NP_376320.1| - 1.2 9.0 11.7 4.6 7.2 1.9 2.3 1 1 1 2 2 2 0 Prefoldin subunit GED PF02212.18 gi|15920651|ref|NP_376320.1| - 2 8.7 8.4 3.2 8.0 2.7 2.5 2 1 0 2 2 2 0 Dynamin GTPase effector domain Nas2_N PF18265.1 gi|15920651|ref|NP_376320.1| - 2.3 8.2 7.5 11 6.0 0.3 3.0 2 2 1 3 3 3 0 Nas2 N_terminal domain YojJ PF10372.9 gi|15920651|ref|NP_376320.1| - 3 8.0 7.2 1.8 8.7 1.0 2.4 2 1 0 2 2 2 0 Bacterial membrane-spanning protein N-terminus Spc24 PF08286.11 gi|15920651|ref|NP_376320.1| - 4.2 7.7 11.6 4.7 7.5 2.2 2.2 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 FlaC_arch PF05377.11 gi|15920651|ref|NP_376320.1| - 4.9 7.6 12.6 3.6 8.0 2.5 2.6 2 1 1 3 3 3 0 Flagella accessory protein C (FlaC) Pcc1 PF09341.10 gi|297616203|ref|YP_003710343.1| - 0.11 12.7 0.0 0.13 12.4 0.0 1.3 1 1 0 1 1 1 0 Transcription factor Pcc1 Ribosomal_L37ae PF01780.19 gi|15920653|ref|NP_376322.1| - 3.5e-25 87.9 7.8 3.7e-25 87.8 7.8 1.0 1 0 0 1 1 1 1 Ribosomal L37ae protein family Zn_Tnp_IS1595 PF12760.7 gi|15920653|ref|NP_376322.1| - 2.4e-05 24.2 3.2 3.1e-05 23.8 3.2 1.4 1 1 0 1 1 1 1 Transposase zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|15920653|ref|NP_376322.1| - 0.00055 19.4 0.1 0.0008 18.9 0.1 1.2 1 0 0 1 1 1 1 TFIIB zinc-binding OrfB_Zn_ribbon PF07282.11 gi|15920653|ref|NP_376322.1| - 0.00096 19.0 1.0 0.0012 18.7 1.0 1.3 1 0 0 1 1 1 1 Putative transposase DNA-binding domain zf-TFIIB PF13453.6 gi|15920653|ref|NP_376322.1| - 0.0045 16.3 0.3 0.0067 15.7 0.3 1.3 1 0 0 1 1 1 1 Transcription factor zinc-finger DnaJ_CXXCXGXG PF00684.19 gi|15920653|ref|NP_376322.1| - 0.0056 17.0 1.3 0.0073 16.7 1.3 1.2 1 0 0 1 1 1 1 DnaJ central domain DUF4379 PF14311.6 gi|15920653|ref|NP_376322.1| - 0.006 16.9 6.6 0.79 10.1 1.0 2.1 2 0 0 2 2 2 2 Probable Zinc-ribbon domain zf-RRN7 PF11781.8 gi|15920653|ref|NP_376322.1| - 0.0078 15.9 0.7 0.014 15.1 0.7 1.4 1 0 0 1 1 1 1 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Lar_restr_allev PF14354.6 gi|15920653|ref|NP_376322.1| - 0.0089 16.4 0.8 0.014 15.8 0.8 1.3 1 0 0 1 1 1 1 Restriction alleviation protein Lar Rep_fac-A_C PF08646.10 gi|15920653|ref|NP_376322.1| - 0.011 15.5 1.7 0.013 15.3 1.7 1.1 1 0 0 1 1 1 0 Replication factor-A C terminal domain Endonuclease_7 PF02945.15 gi|15920653|ref|NP_376322.1| - 0.016 15.1 0.8 0.021 14.7 0.8 1.3 1 1 0 1 1 1 0 Recombination endonuclease VII CpXC PF14353.6 gi|15920653|ref|NP_376322.1| - 0.077 13.0 2.3 0.3 11.1 0.1 2.0 1 1 1 2 2 2 0 CpXC protein HMG_CoA_synt_C PF08540.10 gi|15920653|ref|NP_376322.1| - 0.15 11.7 0.0 0.15 11.7 0.0 1.0 1 0 0 1 1 1 0 Hydroxymethylglutaryl-coenzyme A synthase C terminal RNase_PH PF01138.21 gi|15920654|ref|NP_376323.1| - 2e-31 109.2 0.0 5e-31 107.9 0.0 1.6 2 0 0 2 2 2 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 gi|15920654|ref|NP_376323.1| - 5.2e-10 39.2 0.1 1.6e-09 37.7 0.1 1.9 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 RNase_PH PF01138.21 gi|15920655|ref|NP_376324.1| - 8.2e-36 123.4 0.0 1.1e-35 123.0 0.0 1.2 1 0 0 1 1 1 1 3' exoribonuclease family, domain 1 RNase_PH_C PF03725.15 gi|15920655|ref|NP_376324.1| - 6.4e-14 51.7 0.0 1.2e-13 50.9 0.0 1.4 1 0 0 1 1 1 1 3' exoribonuclease family, domain 2 KH_6 PF15985.5 gi|15920656|ref|NP_376325.1| - 3.8e-06 27.1 0.0 7.5e-06 26.2 0.0 1.6 1 0 0 1 1 1 1 KH domain KH_1 PF00013.29 gi|15920656|ref|NP_376325.1| - 6.4e-05 22.7 0.1 0.00013 21.7 0.1 1.7 1 1 0 1 1 1 1 KH domain S1 PF00575.23 gi|15920656|ref|NP_376325.1| - 0.0049 17.2 0.0 0.017 15.4 0.0 1.9 2 0 0 2 2 2 1 S1 RNA binding domain SBDS PF01172.18 gi|15920657|ref|NP_376326.1| - 1.3e-26 92.5 0.7 3.4e-26 91.1 0.7 1.8 1 0 0 1 1 1 1 Shwachman-Bodian-Diamond syndrome (SBDS) protein SBDS_C PF09377.10 gi|15920657|ref|NP_376326.1| - 7.5e-22 77.5 2.4 1.3e-21 76.8 2.4 1.4 1 0 0 1 1 1 1 SBDS protein C-terminal domain EFG_C PF00679.24 gi|15920657|ref|NP_376326.1| - 0.086 12.9 0.0 0.2 11.7 0.0 1.6 1 0 0 1 1 1 0 Elongation factor G C-terminus Img2 PF05046.14 gi|15920657|ref|NP_376326.1| - 0.12 12.7 0.8 1.8 9.0 0.1 2.4 2 0 0 2 2 2 0 Mitochondrial large subunit ribosomal protein (Img2) Proteasome PF00227.26 gi|15920658|ref|NP_376327.1| - 2.7e-58 196.6 0.0 3.8e-58 196.1 0.0 1.2 1 0 0 1 1 1 1 Proteasome subunit Proteasome_A_N PF10584.9 gi|15920658|ref|NP_376327.1| - 4e-13 48.8 1.5 8.3e-13 47.8 0.5 2.0 2 0 0 2 2 2 1 Proteasome subunit A N-terminal signature CAT_RBD PF03123.15 gi|15920658|ref|NP_376327.1| - 0.081 12.9 0.0 0.29 11.1 0.0 1.8 2 0 0 2 2 2 0 CAT RNA binding domain RNase_P_Rpp14 PF01900.19 gi|15920659|ref|NP_376328.1| - 1e-10 41.7 0.1 1.6e-10 41.1 0.1 1.3 1 0 0 1 1 1 1 Rpp14/Pop5 family DUF1938 PF09153.10 gi|15920660|ref|NP_376329.1| - 0.028 14.5 0.2 0.053 13.6 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1938) RNA_binding PF01877.17 gi|15920661|ref|NP_376330.1| - 3.2e-30 104.9 1.6 4.7e-30 104.3 1.6 1.3 1 0 0 1 1 1 1 RNA binding Ribosomal_L15e PF00827.17 gi|15920662|ref|NP_376331.1| - 1.3e-74 250.1 4.9 1.3e-74 250.1 4.9 1.3 1 1 0 1 1 1 1 Ribosomal L15 MMR_HSR1_C PF08438.10 gi|15920663|ref|NP_376332.1| - 5.4e-38 130.0 0.2 8.8e-38 129.3 0.2 1.3 1 0 0 1 1 1 1 GTPase of unknown function C-terminal MMR_HSR1 PF01926.23 gi|15920663|ref|NP_376332.1| - 6.1e-21 74.6 0.4 5e-20 71.7 0.0 2.5 3 0 0 3 3 3 1 50S ribosome-binding GTPase TGS PF02824.21 gi|15920663|ref|NP_376332.1| - 9.1e-12 44.9 0.0 1.8e-11 43.9 0.0 1.5 1 0 0 1 1 1 1 TGS domain FeoB_N PF02421.18 gi|15920663|ref|NP_376332.1| - 3.8e-07 29.8 0.1 4.7e-05 23.0 0.1 2.8 3 0 0 3 3 3 1 Ferrous iron transport protein B YchF-GTPase_C PF06071.13 gi|15920663|ref|NP_376332.1| - 0.00043 20.4 0.2 0.27 11.4 0.0 2.6 1 1 1 2 2 2 2 Protein of unknown function (DUF933) Latarcin PF10279.9 gi|15920663|ref|NP_376332.1| - 0.073 13.5 0.1 0.19 12.2 0.1 1.7 1 0 0 1 1 1 0 Latarcin precursor DUF1967 PF09269.11 gi|15920663|ref|NP_376332.1| - 0.085 12.8 0.8 7.6 6.6 0.0 3.9 4 1 1 5 5 5 0 Domain of unknown function (DUF1967) Bacillus_HBL PF05791.11 gi|15920663|ref|NP_376332.1| - 0.1 12.4 0.1 0.17 11.7 0.1 1.3 1 0 0 1 1 1 0 Bacillus haemolytic enterotoxin (HBL) Glyco_hydro_77 PF02446.17 gi|15920663|ref|NP_376332.1| - 0.21 10.4 0.0 0.3 9.9 0.0 1.1 1 0 0 1 1 1 0 4-alpha-glucanotransferase NTP_transferase PF00483.23 gi|15920664|ref|NP_376333.1| - 8.5e-36 123.8 0.0 1.1e-35 123.4 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 gi|15920664|ref|NP_376333.1| - 4.5e-18 64.2 13.5 4.2e-07 29.4 2.3 4.7 3 1 3 6 6 6 5 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 gi|15920664|ref|NP_376333.1| - 2.2e-11 44.4 0.0 3e-11 43.9 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep_2 PF14602.6 gi|15920664|ref|NP_376333.1| - 5.1e-05 22.9 4.5 0.18 11.6 0.0 4.4 3 1 2 5 5 5 3 Hexapeptide repeat of succinyl-transferase IspD PF01128.19 gi|15920664|ref|NP_376333.1| - 8.2e-05 22.4 0.0 0.00012 21.9 0.0 1.3 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DUF1565 PF07602.11 gi|15920664|ref|NP_376333.1| - 0.0051 16.2 0.4 0.012 15.0 0.4 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF1565) CTP_transf_3 PF02348.19 gi|15920664|ref|NP_376333.1| - 0.0071 16.3 0.1 0.011 15.7 0.1 1.3 1 0 0 1 1 1 1 Cytidylyltransferase Fucokinase PF07959.12 gi|15920664|ref|NP_376333.1| - 0.13 11.1 0.0 0.31 9.9 0.0 1.7 1 0 0 1 1 1 0 L-fucokinase Ribosomal_S3Ae PF01015.18 gi|15920665|ref|NP_376334.1| - 1.3e-68 230.6 1.2 1.4e-68 230.5 1.2 1.0 1 0 0 1 1 1 1 Ribosomal S3Ae family SpoU_methylase PF00588.19 gi|15920666|ref|NP_376335.1| - 2.1e-31 109.0 0.0 2.7e-31 108.6 0.0 1.1 1 0 0 1 1 1 1 SpoU rRNA Methylase family Methyltrn_RNA_4 PF09936.9 gi|15920666|ref|NP_376335.1| - 6.9e-05 22.8 0.0 0.0028 17.5 0.0 2.2 1 1 0 1 1 1 1 SAM-dependent RNA methyltransferase MTS PF05175.14 gi|15920667|ref|NP_376336.1| - 3.9e-10 39.5 0.0 5.7e-10 39.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|15920667|ref|NP_376336.1| - 4.5e-08 32.8 0.0 7.5e-08 32.1 0.0 1.4 2 0 0 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) Cons_hypoth95 PF03602.15 gi|15920667|ref|NP_376336.1| - 2.4e-05 24.1 0.0 8e-05 22.4 0.0 1.7 2 0 0 2 2 2 1 Conserved hypothetical protein 95 Methyltransf_31 PF13847.6 gi|15920667|ref|NP_376336.1| - 0.00032 20.5 0.0 0.00044 20.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|15920667|ref|NP_376336.1| - 0.0006 20.5 0.0 0.0011 19.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|15920667|ref|NP_376336.1| - 0.0036 17.2 0.1 0.014 15.3 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain PCMT PF01135.19 gi|15920667|ref|NP_376336.1| - 0.0038 17.0 0.0 0.011 15.5 0.0 1.7 2 0 0 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_23 PF13489.6 gi|15920667|ref|NP_376336.1| - 0.0044 16.9 0.0 0.0059 16.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_16 PF10294.9 gi|15920667|ref|NP_376336.1| - 0.15 11.8 0.1 0.25 11.1 0.1 1.3 1 0 0 1 1 1 0 Lysine methyltransferase RrnaAD PF00398.20 gi|15920668|ref|NP_376337.1| - 1.9e-17 63.2 0.8 1.5e-08 34.1 0.3 2.1 1 1 1 2 2 2 2 Ribosomal RNA adenine dimethylase DUF655 PF04919.12 gi|15920669|ref|NP_376338.1| - 1.8e-60 204.0 2.5 2.1e-60 203.7 2.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF655) HHH_6 PF14579.6 gi|15920669|ref|NP_376338.1| - 0.0024 18.1 0.0 0.0043 17.3 0.0 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix motif RNA_pol_Rpb4 PF03874.16 gi|15920670|ref|NP_376339.1| - 3.5e-07 30.6 1.1 3.9e-07 30.4 1.1 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb4 PriX PF18689.1 gi|15920670|ref|NP_376339.1| - 0.015 15.6 0.2 0.03 14.7 0.2 1.6 1 1 1 2 2 2 0 Primase X RPAP3_C PF13877.6 gi|15920670|ref|NP_376339.1| - 0.083 13.4 0.2 0.21 12.2 0.1 1.7 2 0 0 2 2 2 0 Potential Monad-binding region of RPAP3 Ribosomal_L21e PF01157.18 gi|15920671|ref|NP_376340.1| - 1.5e-37 127.5 3.7 1.6e-37 127.4 3.7 1.0 1 0 0 1 1 1 1 Ribosomal protein L21e DUF533 PF04391.12 gi|15920673|ref|NP_376342.1| - 0.19 11.3 0.0 0.3 10.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF533) DUF3649 PF12365.8 gi|15920673|ref|NP_376342.1| - 0.45 10.3 4.3 0.91 9.3 4.3 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3649) UPF0147 PF03685.13 gi|15920674|ref|NP_376343.1| - 1.4e-36 124.4 3.5 1.6e-36 124.2 3.5 1.0 1 0 0 1 1 1 1 Uncharacterised protein family (UPF0147) UPF0253 PF06786.12 gi|15920674|ref|NP_376343.1| - 0.0049 17.1 0.1 0.12 12.7 0.1 2.1 1 1 1 2 2 2 1 Uncharacterised protein family (UPF0253) Auto_anti-p27 PF06677.12 gi|15920676|ref|NP_376345.1| - 7e-14 51.7 0.2 1.1e-13 51.1 0.2 1.3 1 0 0 1 1 1 1 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) AAA_assoc_C PF09821.9 gi|15920676|ref|NP_376345.1| - 0.029 14.9 0.0 0.035 14.7 0.0 1.2 1 0 0 1 1 1 0 C-terminal AAA-associated domain zf-ribbon_3 PF13248.6 gi|15920676|ref|NP_376345.1| - 0.033 13.6 0.4 6 6.4 0.1 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Thymidylate_kin PF02223.17 gi|15920677|ref|NP_376346.1| - 2e-42 145.0 0.3 2.3e-42 144.8 0.3 1.0 1 0 0 1 1 1 1 Thymidylate kinase AAA_28 PF13521.6 gi|15920677|ref|NP_376346.1| - 1.5e-07 31.8 0.0 1.8e-07 31.6 0.0 1.1 1 0 0 1 1 1 1 AAA domain dNK PF01712.19 gi|15920677|ref|NP_376346.1| - 7.2e-05 22.7 2.5 0.01 15.7 2.5 2.2 1 1 0 1 1 1 1 Deoxynucleoside kinase NTPase_1 PF03266.15 gi|15920677|ref|NP_376346.1| - 0.00049 20.1 1.1 0.0013 18.6 0.1 2.1 2 1 0 2 2 2 1 NTPase SRP54 PF00448.22 gi|15920677|ref|NP_376346.1| - 0.0006 19.5 0.1 0.002 17.8 0.0 1.8 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain MobB PF03205.14 gi|15920677|ref|NP_376346.1| - 0.0019 18.1 0.1 0.0041 17.0 0.1 1.5 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_33 PF13671.6 gi|15920677|ref|NP_376346.1| - 0.003 17.7 0.1 0.0044 17.2 0.1 1.7 1 1 0 1 1 1 1 AAA domain APS_kinase PF01583.20 gi|15920677|ref|NP_376346.1| - 0.0046 16.9 0.0 0.0083 16.0 0.0 1.5 1 0 0 1 1 1 1 Adenylylsulphate kinase SKI PF01202.22 gi|15920677|ref|NP_376346.1| - 0.0048 17.0 0.6 0.35 11.0 0.1 2.2 2 0 0 2 2 2 1 Shikimate kinase AAA_18 PF13238.6 gi|15920677|ref|NP_376346.1| - 0.0086 16.6 0.2 0.035 14.7 0.2 2.1 1 1 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|15920677|ref|NP_376346.1| - 0.0092 15.7 0.0 0.015 15.0 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|15920677|ref|NP_376346.1| - 0.012 16.0 1.6 0.15 12.4 1.0 2.5 1 1 0 1 1 1 0 AAA domain PPK2 PF03976.14 gi|15920677|ref|NP_376346.1| - 0.013 15.0 0.0 0.032 13.7 0.0 1.6 1 0 0 1 1 1 0 Polyphosphate kinase 2 (PPK2) NB-ARC PF00931.22 gi|15920677|ref|NP_376346.1| - 0.014 14.6 0.1 0.032 13.4 0.0 1.7 2 0 0 2 2 2 0 NB-ARC domain NACHT PF05729.12 gi|15920677|ref|NP_376346.1| - 0.019 14.9 0.2 0.051 13.5 0.0 1.8 2 1 0 2 2 2 0 NACHT domain KdpD PF02702.17 gi|15920677|ref|NP_376346.1| - 0.04 13.4 0.1 0.24 10.8 0.0 2.0 1 1 1 2 2 2 0 Osmosensitive K+ channel His kinase sensor domain CBP_BcsQ PF06564.12 gi|15920677|ref|NP_376346.1| - 0.041 13.3 0.0 2.4 7.6 0.0 2.2 2 0 0 2 2 2 0 Cellulose biosynthesis protein BcsQ ATP_bind_1 PF03029.17 gi|15920677|ref|NP_376346.1| - 0.064 13.0 0.3 0.15 11.9 0.1 1.7 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA PF00004.29 gi|15920677|ref|NP_376346.1| - 0.096 13.1 0.6 0.21 12.0 0.6 1.9 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_31 PF13614.6 gi|15920677|ref|NP_376346.1| - 0.098 12.6 2.2 1.8 8.5 2.2 2.1 1 1 0 1 1 1 0 AAA domain ATP-synt_F PF01990.17 gi|15920677|ref|NP_376346.1| - 0.11 12.8 0.1 0.39 11.1 0.0 1.9 2 1 0 2 2 2 0 ATP synthase (F/14-kDa) subunit AAA_16 PF13191.6 gi|15920677|ref|NP_376346.1| - 0.12 12.7 0.0 0.2 12.0 0.0 1.8 1 1 0 1 1 1 0 AAA ATPase domain Zeta_toxin PF06414.12 gi|15920677|ref|NP_376346.1| - 0.13 11.5 0.1 0.51 9.6 0.0 1.9 2 0 0 2 2 2 0 Zeta toxin LytR_C PF13399.6 gi|15920677|ref|NP_376346.1| - 0.15 13.1 0.0 0.27 12.2 0.0 1.4 1 0 0 1 1 1 0 LytR cell envelope-related transcriptional attenuator MeaB PF03308.16 gi|15920677|ref|NP_376346.1| - 0.15 11.0 0.0 0.25 10.3 0.0 1.5 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB CbiA PF01656.23 gi|15920677|ref|NP_376346.1| - 0.17 12.0 0.6 0.32 11.1 0.6 1.9 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain ABC_tran PF00005.27 gi|15920677|ref|NP_376346.1| - 0.18 12.3 0.1 0.25 11.8 0.1 1.6 1 1 0 1 1 1 0 ABC transporter AAA_14 PF13173.6 gi|15920677|ref|NP_376346.1| - 0.5 10.4 4.0 2.4 8.2 0.1 2.3 1 1 1 2 2 2 0 AAA domain CLP1_P PF16575.5 gi|15920678|ref|NP_376347.1| - 5.2e-28 98.1 0.1 7.3e-28 97.6 0.1 1.2 1 0 0 1 1 1 1 mRNA cleavage and polyadenylation factor CLP1 P-loop CLP1_N PF16573.5 gi|15920678|ref|NP_376347.1| - 0.013 15.7 0.0 0.026 14.7 0.0 1.5 1 0 0 1 1 1 0 N-terminal beta-sandwich domain of polyadenylation factor CarS-like PF01864.17 gi|15920681|ref|NP_376350.1| - 2.5e-38 131.8 11.1 9.9e-38 129.8 11.1 1.7 1 1 0 1 1 1 1 CDP-archaeol synthase CTP_transf_1 PF01148.20 gi|15920681|ref|NP_376350.1| - 0.00026 20.8 3.4 0.00026 20.8 3.4 1.8 2 0 0 2 2 2 1 Cytidylyltransferase family MtrC PF04211.13 gi|15920681|ref|NP_376350.1| - 0.19 10.8 6.1 0.27 10.3 6.1 1.1 1 0 0 1 1 1 0 Tetrahydromethanopterin S-methyltransferase, subunit C DUF4896 PF16237.5 gi|15920682|ref|NP_376351.1| - 0.004 17.0 4.9 0.004 17.0 4.9 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF4896) CPP1-like PF11833.8 gi|15920682|ref|NP_376351.1| - 0.012 15.3 2.2 0.018 14.7 2.0 1.3 1 1 0 1 1 1 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like Acyl_transf_3 PF01757.22 gi|15920682|ref|NP_376351.1| - 0.014 14.4 8.2 0.016 14.3 8.2 1.1 1 0 0 1 1 1 0 Acyltransferase family DUF3112 PF11309.8 gi|15920682|ref|NP_376351.1| - 0.054 12.9 6.5 0.12 11.8 6.2 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF3112) CcmD PF04995.14 gi|15920682|ref|NP_376351.1| - 0.17 12.0 1.0 0.17 12.0 1.0 3.3 3 1 1 4 4 4 0 Heme exporter protein D (CcmD) DUF5336 PF17270.2 gi|15920682|ref|NP_376351.1| - 1.6 8.3 7.3 3.2 7.4 7.3 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5336) RseC_MucC PF04246.12 gi|15920682|ref|NP_376351.1| - 5.3 7.0 10.1 0.35 10.8 3.1 1.9 1 1 1 2 2 2 0 Positive regulator of sigma(E), RseC/MucC DUF4131 PF13567.6 gi|15920682|ref|NP_376351.1| - 7.1 6.3 7.4 0.97 9.1 2.2 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4131) SUR7 PF06687.12 gi|15920682|ref|NP_376351.1| - 8.2 6.0 10.1 17 4.9 10.1 1.6 1 1 0 1 1 1 0 SUR7/PalI family MCM PF00493.23 gi|15920683|ref|NP_376352.1| - 9.2e-98 325.8 0.0 1.5e-97 325.1 0.0 1.3 1 0 0 1 1 1 1 MCM P-loop domain MCM_lid PF17855.1 gi|15920683|ref|NP_376352.1| - 3e-30 104.5 0.5 6.6e-30 103.4 0.5 1.6 1 0 0 1 1 1 1 MCM AAA-lid domain MCM_OB PF17207.3 gi|15920683|ref|NP_376352.1| - 1.7e-25 89.3 0.0 2.9e-25 88.5 0.0 1.4 1 0 0 1 1 1 1 MCM OB domain AAA_5 PF07728.14 gi|15920683|ref|NP_376352.1| - 6.8e-08 32.6 0.0 1.4e-07 31.6 0.0 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 gi|15920683|ref|NP_376352.1| - 2.5e-07 30.3 0.1 4.3e-05 23.0 0.0 2.6 1 1 1 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_3 PF07726.11 gi|15920683|ref|NP_376352.1| - 1.3e-05 25.1 0.0 2.9e-05 23.9 0.0 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Sigma54_activat PF00158.26 gi|15920683|ref|NP_376352.1| - 1.7e-05 24.6 0.1 0.00021 21.0 0.1 2.3 1 1 0 1 1 1 1 Sigma-54 interaction domain HTH_IclR PF09339.10 gi|15920683|ref|NP_376352.1| - 0.00097 18.9 0.0 0.005 16.6 0.0 2.2 2 0 0 2 2 2 1 IclR helix-turn-helix domain DUF3987 PF13148.6 gi|15920683|ref|NP_376352.1| - 0.0021 17.2 0.1 0.4 9.7 0.0 2.2 2 0 0 2 2 2 2 Protein of unknown function (DUF3987) Fe_dep_repress PF01325.19 gi|15920683|ref|NP_376352.1| - 0.021 15.0 0.1 0.062 13.5 0.1 1.7 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain MarR_2 PF12802.7 gi|15920683|ref|NP_376352.1| - 0.032 14.1 0.0 0.14 12.0 0.0 2.1 2 0 0 2 2 2 0 MarR family EAP30 PF04157.16 gi|15920683|ref|NP_376352.1| - 0.066 12.5 0.1 0.14 11.5 0.1 1.5 1 0 0 1 1 1 0 EAP30/Vps36 family AAA_16 PF13191.6 gi|15920683|ref|NP_376352.1| - 0.14 12.6 0.4 0.64 10.4 0.1 2.1 2 1 0 2 2 2 0 AAA ATPase domain AAA_30 PF13604.6 gi|15920683|ref|NP_376352.1| - 0.44 10.2 4.2 0.44 10.2 2.6 1.8 2 0 0 2 2 2 0 AAA domain Sld5 PF05916.11 gi|15920685|ref|NP_376354.1| - 1.9e-12 47.6 1.9 2.5e-12 47.2 1.9 1.2 1 0 0 1 1 1 1 GINS complex protein DUF1492 PF07374.11 gi|15920685|ref|NP_376354.1| - 0.12 12.6 1.8 0.21 11.8 1.8 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1492) THUMP PF02926.17 gi|15920686|ref|NP_376355.1| - 6.7e-12 45.7 1.5 8.5e-12 45.4 1.5 1.1 1 0 0 1 1 1 1 THUMP domain Cdc6_C PF09079.11 gi|15920687|ref|NP_376356.1| - 9.5e-19 67.2 0.1 1.5e-17 63.3 0.0 2.5 2 0 0 2 2 2 1 CDC6, C terminal winged helix domain AAA_22 PF13401.6 gi|15920687|ref|NP_376356.1| - 9.8e-13 48.6 0.1 2.6e-12 47.2 0.1 1.7 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|15920687|ref|NP_376356.1| - 1.4e-07 32.1 0.6 3.6e-05 24.2 0.1 3.2 2 1 0 2 2 2 1 AAA ATPase domain TniB PF05621.11 gi|15920687|ref|NP_376356.1| - 2.2e-05 24.0 0.0 4.3e-05 23.0 0.0 1.4 1 0 0 1 1 1 1 Bacterial TniB protein AAA_24 PF13479.6 gi|15920687|ref|NP_376356.1| - 0.001 18.8 0.1 0.0033 17.2 0.0 1.9 2 0 0 2 2 2 1 AAA domain NACHT PF05729.12 gi|15920687|ref|NP_376356.1| - 0.0023 17.9 0.0 0.0049 16.8 0.0 1.6 1 0 0 1 1 1 1 NACHT domain T2SSE PF00437.20 gi|15920687|ref|NP_376356.1| - 0.0071 15.4 0.1 0.013 14.6 0.1 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein CbiA PF01656.23 gi|15920687|ref|NP_376356.1| - 0.015 15.3 0.0 0.042 13.9 0.0 1.9 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain DUF853 PF05872.12 gi|15920687|ref|NP_376356.1| - 0.02 13.5 0.8 0.037 12.6 0.1 1.7 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF853) AAA PF00004.29 gi|15920687|ref|NP_376356.1| - 0.023 15.1 0.0 0.081 13.4 0.0 2.0 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_19 PF13245.6 gi|15920687|ref|NP_376356.1| - 0.043 14.2 1.0 0.26 11.6 1.0 2.1 1 1 0 1 1 1 0 AAA domain DUF2075 PF09848.9 gi|15920687|ref|NP_376356.1| - 0.047 12.9 0.0 0.068 12.4 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) AAA_7 PF12775.7 gi|15920687|ref|NP_376356.1| - 0.06 12.9 0.3 0.17 11.4 0.1 1.8 3 0 0 3 3 3 0 P-loop containing dynein motor region AAA_6 PF12774.7 gi|15920687|ref|NP_376356.1| - 0.069 12.1 1.2 1.6 7.7 0.0 2.7 3 0 0 3 3 3 0 Hydrolytic ATP binding site of dynein motor region ResIII PF04851.15 gi|15920687|ref|NP_376356.1| - 0.079 13.0 0.0 0.16 11.9 0.0 1.6 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit Sigma54_activat PF00158.26 gi|15920687|ref|NP_376356.1| - 0.081 12.6 0.0 0.17 11.6 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_28 PF13521.6 gi|15920687|ref|NP_376356.1| - 0.12 12.6 0.0 0.23 11.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain PfkB PF00294.24 gi|15920687|ref|NP_376356.1| - 0.15 11.4 0.0 0.24 10.7 0.0 1.3 1 0 0 1 1 1 0 pfkB family carbohydrate kinase DUF87 PF01935.17 gi|15920687|ref|NP_376356.1| - 0.64 10.1 5.3 3.1 7.8 1.4 2.6 2 1 0 2 2 2 0 Helicase HerA, central domain MoaC PF01967.21 gi|15920688|ref|NP_376357.1| - 2.3e-48 163.8 3.6 2.5e-48 163.6 3.6 1.0 1 0 0 1 1 1 1 MoaC family DUF2976 PF11190.8 gi|15920688|ref|NP_376357.1| - 0.011 15.5 0.0 0.02 14.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2976) AAA PF00004.29 gi|15920689|ref|NP_376358.1| - 2.7e-15 57.0 0.0 5.3e-15 56.0 0.0 1.5 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_5 PF07728.14 gi|15920689|ref|NP_376358.1| - 3.6e-07 30.3 0.0 7.3e-07 29.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_22 PF13401.6 gi|15920689|ref|NP_376358.1| - 4.5e-07 30.2 0.1 0.0002 21.7 0.0 3.2 2 2 2 4 4 3 1 AAA domain AAA_assoc_2 PF16193.5 gi|15920689|ref|NP_376358.1| - 8.5e-07 29.2 0.2 4.8e-06 26.8 0.2 2.4 1 1 0 1 1 1 1 AAA C-terminal domain AAA_16 PF13191.6 gi|15920689|ref|NP_376358.1| - 1.4e-06 28.8 0.0 1.8e-05 25.2 0.0 2.4 2 1 0 2 2 2 1 AAA ATPase domain AAA_14 PF13173.6 gi|15920689|ref|NP_376358.1| - 2.2e-06 27.7 0.0 5.6e-06 26.4 0.0 1.7 1 0 0 1 1 1 1 AAA domain RuvB_N PF05496.12 gi|15920689|ref|NP_376358.1| - 7.1e-06 25.8 0.0 5.8e-05 22.9 0.0 2.1 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_18 PF13238.6 gi|15920689|ref|NP_376358.1| - 2.4e-05 24.9 0.1 9.3e-05 23.0 0.0 2.2 2 0 0 2 2 1 1 AAA domain IstB_IS21 PF01695.17 gi|15920689|ref|NP_376358.1| - 6.3e-05 22.8 0.0 0.00015 21.6 0.0 1.6 1 1 0 1 1 1 1 IstB-like ATP binding protein NACHT PF05729.12 gi|15920689|ref|NP_376358.1| - 0.00018 21.4 0.1 0.039 13.9 0.0 2.8 2 1 1 3 3 3 1 NACHT domain AAA_17 PF13207.6 gi|15920689|ref|NP_376358.1| - 0.00019 21.9 0.0 0.00097 19.6 0.0 2.1 2 0 0 2 2 2 1 AAA domain ATPase_2 PF01637.18 gi|15920689|ref|NP_376358.1| - 0.00022 21.2 0.1 0.0012 18.8 0.0 2.2 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea DNA_pol3_delta PF06144.13 gi|15920689|ref|NP_376358.1| - 0.00029 20.7 1.9 0.0011 18.8 0.0 2.4 3 0 0 3 3 2 1 DNA polymerase III, delta subunit RNA_helicase PF00910.22 gi|15920689|ref|NP_376358.1| - 0.00069 20.0 0.0 0.0023 18.3 0.0 2.0 1 0 0 1 1 1 1 RNA helicase AAA_24 PF13479.6 gi|15920689|ref|NP_376358.1| - 0.00072 19.3 0.1 0.0023 17.7 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_28 PF13521.6 gi|15920689|ref|NP_376358.1| - 0.0018 18.5 0.0 0.0068 16.7 0.0 1.9 2 0 0 2 2 1 1 AAA domain AAA_33 PF13671.6 gi|15920689|ref|NP_376358.1| - 0.0025 18.0 0.0 0.0058 16.8 0.0 1.6 1 0 0 1 1 1 1 AAA domain NB-ARC PF00931.22 gi|15920689|ref|NP_376358.1| - 0.0031 16.7 0.0 0.0073 15.5 0.0 1.6 1 0 0 1 1 1 1 NB-ARC domain AAA_25 PF13481.6 gi|15920689|ref|NP_376358.1| - 0.0052 16.4 0.0 0.011 15.3 0.0 1.5 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 gi|15920689|ref|NP_376358.1| - 0.0082 16.7 0.0 0.039 14.5 0.0 2.1 2 0 0 2 2 2 1 ABC transporter Rad17 PF03215.15 gi|15920689|ref|NP_376358.1| - 0.012 15.6 0.0 0.12 12.3 0.0 2.3 2 0 0 2 2 2 0 Rad17 P-loop domain TniB PF05621.11 gi|15920689|ref|NP_376358.1| - 0.012 15.1 0.0 0.83 9.0 0.0 2.5 1 1 1 2 2 2 0 Bacterial TniB protein DUF815 PF05673.13 gi|15920689|ref|NP_376358.1| - 0.016 14.4 0.0 0.048 12.8 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF815) ATPase PF06745.13 gi|15920689|ref|NP_376358.1| - 0.018 14.4 0.4 0.28 10.5 0.0 2.7 2 1 1 3 3 3 0 KaiC PPV_E1_C PF00519.17 gi|15920689|ref|NP_376358.1| - 0.018 13.9 0.0 0.063 12.1 0.0 1.8 2 0 0 2 2 2 0 Papillomavirus helicase RsgA_GTPase PF03193.16 gi|15920689|ref|NP_376358.1| - 0.019 14.9 0.0 0.038 13.9 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase Bac_DnaA PF00308.18 gi|15920689|ref|NP_376358.1| - 0.021 14.6 0.3 1.3 8.8 0.0 2.6 3 0 0 3 3 2 0 Bacterial dnaA protein NTPase_1 PF03266.15 gi|15920689|ref|NP_376358.1| - 0.025 14.5 0.0 0.29 11.0 0.0 2.2 2 0 0 2 2 2 0 NTPase AAA_7 PF12775.7 gi|15920689|ref|NP_376358.1| - 0.026 14.0 0.0 0.061 12.8 0.0 1.6 2 0 0 2 2 1 0 P-loop containing dynein motor region Mg_chelatase PF01078.21 gi|15920689|ref|NP_376358.1| - 0.027 13.8 0.0 0.047 13.1 0.0 1.3 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI DUF2797 PF10977.8 gi|15920689|ref|NP_376358.1| - 0.029 14.3 0.1 0.1 12.5 0.0 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF2797) AAA_2 PF07724.14 gi|15920689|ref|NP_376358.1| - 0.032 14.3 0.0 0.096 12.8 0.0 1.8 2 0 0 2 2 1 0 AAA domain (Cdc48 subfamily) AAA_3 PF07726.11 gi|15920689|ref|NP_376358.1| - 0.033 14.1 0.0 0.14 12.0 0.0 2.0 2 1 0 2 2 1 0 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.6 gi|15920689|ref|NP_376358.1| - 0.033 14.7 4.4 0.46 10.9 0.0 2.5 2 1 0 2 2 2 0 AAA domain Parvo_NS1 PF01057.17 gi|15920689|ref|NP_376358.1| - 0.038 13.1 0.0 0.16 11.1 0.0 1.9 2 0 0 2 2 2 0 Parvovirus non-structural protein NS1 TIP49 PF06068.13 gi|15920689|ref|NP_376358.1| - 0.039 13.2 0.0 0.11 11.7 0.0 1.7 2 0 0 2 2 2 0 TIP49 P-loop domain TsaE PF02367.17 gi|15920689|ref|NP_376358.1| - 0.042 13.8 0.0 0.086 12.8 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE TIP49_C PF17856.1 gi|15920689|ref|NP_376358.1| - 0.055 13.6 0.0 0.16 12.2 0.0 1.8 1 0 0 1 1 1 0 TIP49 AAA-lid domain RFC1 PF08519.12 gi|15920689|ref|NP_376358.1| - 0.08 13.1 0.0 0.16 12.2 0.0 1.4 1 0 0 1 1 1 0 Replication factor RFC1 C terminal domain MMR_HSR1 PF01926.23 gi|15920689|ref|NP_376358.1| - 0.092 12.8 0.0 0.24 11.5 0.0 1.8 1 1 0 1 1 1 0 50S ribosome-binding GTPase DUF1456 PF07308.13 gi|15920689|ref|NP_376358.1| - 0.15 12.4 0.3 2.8 8.4 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1456) Rep_fac_C PF08542.11 gi|15920690|ref|NP_376359.1| - 3.1e-25 88.4 0.7 2.1e-24 85.7 0.2 2.4 2 0 0 2 2 2 1 Replication factor C C-terminal domain AAA PF00004.29 gi|15920690|ref|NP_376359.1| - 1.2e-15 58.1 0.0 3.1e-15 56.8 0.0 1.7 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) DNA_pol3_delta2 PF13177.6 gi|15920690|ref|NP_376359.1| - 1.7e-13 50.7 0.0 2.7e-09 37.0 0.0 2.3 1 1 1 2 2 2 2 DNA polymerase III, delta subunit RuvB_N PF05496.12 gi|15920690|ref|NP_376359.1| - 6.1e-07 29.3 0.0 2.2e-06 27.5 0.0 1.9 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_3 PF07726.11 gi|15920690|ref|NP_376359.1| - 2.7e-06 27.3 0.0 4.8e-06 26.5 0.0 1.4 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Rad17 PF03215.15 gi|15920690|ref|NP_376359.1| - 2.8e-06 27.4 0.0 5.6e-06 26.4 0.0 1.6 1 0 0 1 1 1 1 Rad17 P-loop domain DNA_pol3_delta PF06144.13 gi|15920690|ref|NP_376359.1| - 5.5e-06 26.3 0.8 3.7e-05 23.6 0.2 2.3 2 1 1 3 3 3 1 DNA polymerase III, delta subunit AAA_22 PF13401.6 gi|15920690|ref|NP_376359.1| - 1e-05 25.8 0.2 0.077 13.3 0.0 3.1 2 1 1 3 3 3 2 AAA domain AAA_16 PF13191.6 gi|15920690|ref|NP_376359.1| - 1.8e-05 25.2 0.0 0.0045 17.4 0.0 2.6 1 1 1 2 2 2 1 AAA ATPase domain AAA_14 PF13173.6 gi|15920690|ref|NP_376359.1| - 2.2e-05 24.5 0.1 0.0002 21.4 0.0 2.2 1 1 1 2 2 2 1 AAA domain AAA_18 PF13238.6 gi|15920690|ref|NP_376359.1| - 4.7e-05 24.0 0.0 0.00071 20.1 0.0 2.4 2 1 0 2 2 2 1 AAA domain AAA_assoc_2 PF16193.5 gi|15920690|ref|NP_376359.1| - 5.1e-05 23.5 0.0 0.00014 22.2 0.0 1.8 1 0 0 1 1 1 1 AAA C-terminal domain AAA_24 PF13479.6 gi|15920690|ref|NP_376359.1| - 0.00023 20.9 0.0 0.0028 17.4 0.0 2.4 3 0 0 3 3 3 1 AAA domain ResIII PF04851.15 gi|15920690|ref|NP_376359.1| - 0.00049 20.1 0.0 0.0027 17.7 0.0 2.0 1 1 1 2 2 2 1 Type III restriction enzyme, res subunit AAA_11 PF13086.6 gi|15920690|ref|NP_376359.1| - 0.00072 19.4 0.0 0.0014 18.4 0.0 1.5 1 1 0 1 1 1 1 AAA domain TIP49 PF06068.13 gi|15920690|ref|NP_376359.1| - 0.00093 18.5 0.0 0.0059 15.9 0.0 2.0 1 1 0 1 1 1 1 TIP49 P-loop domain IstB_IS21 PF01695.17 gi|15920690|ref|NP_376359.1| - 0.0011 18.7 0.0 0.0023 17.7 0.0 1.5 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_7 PF12775.7 gi|15920690|ref|NP_376359.1| - 0.0014 18.2 0.0 0.0023 17.5 0.0 1.4 1 0 0 1 1 1 1 P-loop containing dynein motor region T2SSE PF00437.20 gi|15920690|ref|NP_376359.1| - 0.0018 17.4 0.0 0.0039 16.3 0.0 1.5 1 0 0 1 1 1 1 Type II/IV secretion system protein Mg_chelatase PF01078.21 gi|15920690|ref|NP_376359.1| - 0.0027 17.1 0.0 0.13 11.6 0.0 2.5 2 1 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA_5 PF07728.14 gi|15920690|ref|NP_376359.1| - 0.0042 17.1 0.0 0.017 15.1 0.0 2.0 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) DUF2075 PF09848.9 gi|15920690|ref|NP_376359.1| - 0.0052 16.1 0.1 0.056 12.7 0.1 2.1 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_30 PF13604.6 gi|15920690|ref|NP_376359.1| - 0.0055 16.4 0.0 0.03 14.1 0.0 2.3 1 1 1 2 2 2 1 AAA domain DUF815 PF05673.13 gi|15920690|ref|NP_376359.1| - 0.006 15.8 0.0 0.012 14.8 0.0 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF815) TniB PF05621.11 gi|15920690|ref|NP_376359.1| - 0.01 15.2 0.0 0.3 10.5 0.0 2.4 2 0 0 2 2 2 0 Bacterial TniB protein PhoH PF02562.16 gi|15920690|ref|NP_376359.1| - 0.01 15.3 0.0 0.9 8.9 0.0 2.5 2 0 0 2 2 2 0 PhoH-like protein Sigma54_activat PF00158.26 gi|15920690|ref|NP_376359.1| - 0.019 14.7 0.0 0.39 10.4 0.0 2.2 2 0 0 2 2 2 0 Sigma-54 interaction domain AAA_19 PF13245.6 gi|15920690|ref|NP_376359.1| - 0.027 14.8 0.2 0.51 10.7 0.1 2.5 2 1 0 2 2 2 0 AAA domain AAA_25 PF13481.6 gi|15920690|ref|NP_376359.1| - 0.03 13.9 0.1 0.089 12.4 0.2 1.8 1 1 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 gi|15920690|ref|NP_376359.1| - 0.035 14.0 0.5 0.86 9.5 0.0 2.8 2 1 1 3 3 3 0 NTPase AAA_28 PF13521.6 gi|15920690|ref|NP_376359.1| - 0.045 14.0 0.0 0.1 12.9 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|15920690|ref|NP_376359.1| - 0.048 13.8 0.4 0.13 12.4 0.3 2.0 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|15920690|ref|NP_376359.1| - 0.056 13.8 0.0 0.13 12.7 0.0 1.7 1 1 0 1 1 1 0 RNA helicase KTI12 PF08433.10 gi|15920690|ref|NP_376359.1| - 0.056 12.9 0.0 0.15 11.5 0.0 1.7 2 0 0 2 2 2 0 Chromatin associated protein KTI12 FtsK_SpoIIIE PF01580.18 gi|15920690|ref|NP_376359.1| - 0.12 11.7 0.0 0.48 9.7 0.0 2.0 2 1 1 3 3 3 0 FtsK/SpoIIIE family Viral_helicase1 PF01443.18 gi|15920690|ref|NP_376359.1| - 0.13 12.0 0.0 0.2 11.4 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase TPR_6 PF13174.6 gi|15920690|ref|NP_376359.1| - 0.58 10.9 2.4 35 5.3 0.0 3.7 3 1 0 3 3 3 0 Tetratricopeptide repeat PBP PF01161.20 gi|15920691|ref|NP_376360.1| - 1.4e-35 122.5 0.0 1.7e-35 122.2 0.0 1.0 1 0 0 1 1 1 1 Phosphatidylethanolamine-binding protein Proteasome PF00227.26 gi|15920692|ref|NP_376361.1| - 8.3e-51 172.2 0.5 9.4e-51 172.0 0.5 1.0 1 0 0 1 1 1 1 Proteasome subunit Amidase PF01425.21 gi|15920693|ref|NP_376362.1| - 1.6e-82 277.9 0.8 7.9e-64 216.3 0.7 2.0 1 1 1 2 2 2 2 Amidase ADH_N PF08240.12 gi|15920695|ref|NP_376364.1| - 8.3e-27 93.2 0.1 1.6e-26 92.3 0.1 1.5 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|15920695|ref|NP_376364.1| - 1.8e-23 82.9 0.2 2.7e-23 82.4 0.2 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|15920695|ref|NP_376364.1| - 3.3e-12 47.6 0.0 8e-12 46.4 0.0 1.7 2 0 0 2 2 1 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 gi|15920695|ref|NP_376364.1| - 0.00024 20.4 2.9 0.00043 19.6 2.9 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain LDcluster4 PF18306.1 gi|15920695|ref|NP_376364.1| - 0.00084 19.0 1.6 0.0018 17.9 1.6 1.5 1 0 0 1 1 1 1 SLOG cluster4 family adh_short PF00106.25 gi|15920695|ref|NP_376364.1| - 0.0042 16.6 1.1 0.0068 15.9 1.1 1.3 1 0 0 1 1 1 1 short chain dehydrogenase PTS_IIB PF02302.17 gi|15920695|ref|NP_376364.1| - 0.024 15.3 0.5 0.067 13.9 0.5 1.7 1 0 0 1 1 1 0 PTS system, Lactose/Cellobiose specific IIB subunit Epimerase PF01370.21 gi|15920695|ref|NP_376364.1| - 0.028 13.9 0.2 0.04 13.4 0.2 1.2 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family SIS_2 PF13580.6 gi|15920695|ref|NP_376364.1| - 0.033 14.2 0.6 0.07 13.2 0.4 1.6 2 0 0 2 2 2 0 SIS domain CMAS PF02353.20 gi|15920695|ref|NP_376364.1| - 0.047 13.0 0.1 0.085 12.1 0.1 1.4 1 0 0 1 1 1 0 Mycolic acid cyclopropane synthetase ELFV_dehydrog PF00208.21 gi|15920695|ref|NP_376364.1| - 0.061 13.0 0.4 0.096 12.4 0.4 1.3 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase Eno-Rase_NADH_b PF12242.8 gi|15920695|ref|NP_376364.1| - 0.081 12.7 1.2 0.2 11.4 1.2 1.7 1 0 0 1 1 1 0 NAD(P)H binding domain of trans-2-enoyl-CoA reductase E1-N PF14463.6 gi|15920695|ref|NP_376364.1| - 0.12 12.1 0.1 0.25 11.2 0.1 1.5 1 0 0 1 1 1 0 E1 N-terminal domain SGIII PF15467.6 gi|15920696|ref|NP_376365.1| - 0.1 11.8 0.1 0.19 11.0 0.0 1.4 2 0 0 2 2 2 0 Secretogranin-3 DIM PF08194.12 gi|15920697|ref|NP_376366.1| - 0.027 14.7 1.4 0.056 13.7 1.4 1.5 1 0 0 1 1 1 0 DIM protein eRF1_2 PF03464.15 gi|15920698|ref|NP_376367.1| - 9.7e-43 145.7 0.0 1.5e-42 145.0 0.0 1.3 1 0 0 1 1 1 1 eRF1 domain 2 eRF1_3 PF03465.15 gi|15920698|ref|NP_376367.1| - 1.1e-21 77.4 0.3 8.3e-21 74.6 0.3 2.3 1 1 0 1 1 1 1 eRF1 domain 3 acVLRF1 PF18859.1 gi|15920698|ref|NP_376367.1| - 1.4e-13 51.3 0.0 4.5e-13 49.6 0.0 1.8 2 0 0 2 2 2 1 Actinobacteria/chloroflexi VLRF1 release factor baeRF_family10 PF18854.1 gi|15920698|ref|NP_376367.1| - 9.2e-11 42.2 0.0 1.4e-10 41.6 0.0 1.3 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 10 eRF1_1 PF03463.15 gi|15920698|ref|NP_376367.1| - 5.8e-05 23.1 0.0 9.8e-05 22.4 0.0 1.4 1 0 0 1 1 1 1 eRF1 domain 1 Trp_syntA PF00290.20 gi|15920698|ref|NP_376367.1| - 0.12 11.2 0.0 0.29 9.9 0.0 1.6 1 0 0 1 1 1 0 Tryptophan synthase alpha chain DUF1843 PF08898.10 gi|15920698|ref|NP_376367.1| - 5.7 7.5 6.9 0.6 10.7 0.6 2.4 3 0 0 3 3 3 0 Domain of unknown function (DUF1843) Pribosyltran PF00156.27 gi|15920699|ref|NP_376368.1| - 3e-10 39.9 0.0 4.3e-10 39.3 0.0 1.2 1 0 0 1 1 1 1 Phosphoribosyl transferase domain Pribosyl_synth PF14572.6 gi|15920699|ref|NP_376368.1| - 0.1 12.7 0.1 0.14 12.2 0.1 1.2 1 0 0 1 1 1 0 Phosphoribosyl synthetase-associated domain UPRTase PF14681.6 gi|15920699|ref|NP_376368.1| - 0.12 11.8 0.0 0.17 11.3 0.0 1.1 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase Imm17 PF15562.6 gi|15920699|ref|NP_376368.1| - 0.32 10.9 1.0 27 4.7 0.0 2.3 2 0 0 2 2 2 0 Immunity protein 17 PNP_UDP_1 PF01048.20 gi|15920700|ref|NP_376369.1| - 3.5e-46 157.4 0.0 4e-46 157.2 0.0 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily Adaptin_N PF01602.20 gi|15920700|ref|NP_376369.1| - 0.034 12.7 0.0 0.045 12.3 0.0 1.1 1 0 0 1 1 1 0 Adaptin N terminal region polyprenyl_synt PF00348.17 gi|15920702|ref|NP_376371.1| - 3.2e-35 121.4 0.1 4.4e-35 121.0 0.1 1.3 1 0 0 1 1 1 1 Polyprenyl synthetase Glypican PF01153.19 gi|15920702|ref|NP_376371.1| - 0.23 10.3 0.0 0.3 9.9 0.0 1.1 1 0 0 1 1 1 0 Glypican RimK PF08443.11 gi|15920703|ref|NP_376372.1| - 3.3e-30 105.1 0.0 5.2e-30 104.4 0.0 1.3 1 0 0 1 1 1 1 RimK-like ATP-grasp domain GSH-S_ATP PF02955.16 gi|15920703|ref|NP_376372.1| - 5.1e-11 42.3 0.0 7.9e-11 41.7 0.0 1.3 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATP-grasp_3 PF02655.14 gi|15920703|ref|NP_376372.1| - 1.2e-09 38.5 0.2 2.5e-09 37.4 0.2 1.6 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_YheCD PF14398.6 gi|15920703|ref|NP_376372.1| - 9.8e-09 34.8 0.0 0.00051 19.4 0.0 2.8 3 0 0 3 3 3 2 YheC/D like ATP-grasp ATPgrasp_ST PF14397.6 gi|15920703|ref|NP_376372.1| - 3e-05 23.4 0.0 0.054 12.7 0.0 2.4 2 0 0 2 2 2 2 Sugar-transfer associated ATP-grasp R2K_3 PF14243.6 gi|15920703|ref|NP_376372.1| - 3.2e-05 24.0 0.0 5.8e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 ATP-grasp domain, R2K clade family 3 Ins134_P3_kin PF05770.11 gi|15920703|ref|NP_376372.1| - 0.00049 19.7 0.2 0.15 11.6 0.0 2.3 1 1 1 2 2 2 2 Inositol 1,3,4-trisphosphate 5/6-kinase ATP-grasp domain Rimk_N PF18030.1 gi|15920703|ref|NP_376372.1| - 0.0058 17.0 0.0 0.011 16.1 0.0 1.5 1 0 0 1 1 1 1 RimK PreATP-grasp domain Synapsin_C PF02750.14 gi|15920703|ref|NP_376372.1| - 0.0064 16.0 0.0 0.0088 15.6 0.0 1.2 1 0 0 1 1 1 1 Synapsin, ATP binding domain CPSase_L_D2 PF02786.17 gi|15920703|ref|NP_376372.1| - 0.0099 15.4 0.0 0.024 14.1 0.0 1.6 1 1 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain R2K_2 PF18299.1 gi|15920703|ref|NP_376372.1| - 0.039 13.8 0.0 0.077 12.9 0.0 1.5 1 0 0 1 1 1 0 ATP-grasp domain, R2K clade family 2 ATPgrasp_Ter PF15632.6 gi|15920703|ref|NP_376372.1| - 0.14 11.9 0.0 0.46 10.2 0.0 1.7 2 0 0 2 2 2 0 ATP-grasp in the biosynthetic pathway with Ter operon AsnC_trans_reg PF01037.21 gi|15920704|ref|NP_376373.1| - 1.1e-17 63.7 0.1 1.7e-17 63.2 0.1 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_AsnC-type PF13404.6 gi|15920704|ref|NP_376373.1| - 1.4e-17 63.2 0.3 2.3e-17 62.5 0.3 1.3 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_24 PF13412.6 gi|15920704|ref|NP_376373.1| - 7.1e-17 60.7 1.7 1.2e-16 59.9 1.7 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 gi|15920704|ref|NP_376373.1| - 2.8e-08 33.6 0.1 7.3e-08 32.2 0.1 1.7 1 0 0 1 1 1 1 HTH domain HTH_5 PF01022.20 gi|15920704|ref|NP_376373.1| - 5e-05 23.1 0.1 0.00011 21.9 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_23 PF13384.6 gi|15920704|ref|NP_376373.1| - 0.00012 21.8 0.1 0.00051 19.7 0.0 1.9 2 0 0 2 2 2 1 Homeodomain-like domain AsnC_trans_reg2 PF17805.1 gi|15920704|ref|NP_376373.1| - 0.0004 20.5 0.0 0.00075 19.6 0.0 1.4 1 0 0 1 1 1 1 AsnC-like ligand binding domain MarR PF01047.22 gi|15920704|ref|NP_376373.1| - 0.00057 19.7 0.4 0.0044 16.9 0.2 2.3 2 1 0 2 2 2 1 MarR family ACT_4 PF13291.6 gi|15920704|ref|NP_376373.1| - 0.0018 18.9 0.1 0.047 14.3 0.0 2.6 3 0 0 3 3 3 1 ACT domain Sigma70_r4 PF04545.16 gi|15920704|ref|NP_376373.1| - 0.0025 17.3 0.4 0.01 15.3 0.0 2.2 2 1 0 2 2 2 1 Sigma-70, region 4 Fe_dep_repress PF01325.19 gi|15920704|ref|NP_376373.1| - 0.0025 18.0 0.5 0.043 14.0 0.0 2.4 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain HTH_20 PF12840.7 gi|15920704|ref|NP_376373.1| - 0.0027 17.7 0.0 0.0052 16.8 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain NapD PF03927.13 gi|15920704|ref|NP_376373.1| - 0.0052 16.8 0.0 0.011 15.8 0.0 1.5 1 0 0 1 1 1 1 NapD protein HxlR PF01638.17 gi|15920704|ref|NP_376373.1| - 0.0055 16.5 0.0 0.01 15.7 0.0 1.6 1 1 0 1 1 1 1 HxlR-like helix-turn-helix HTH_Mga PF08280.11 gi|15920704|ref|NP_376373.1| - 0.0067 16.4 0.1 0.015 15.4 0.1 1.5 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain HTH_Tnp_ISL3 PF13542.6 gi|15920704|ref|NP_376373.1| - 0.0093 15.4 0.0 0.022 14.1 0.0 1.7 2 0 0 2 2 2 1 Helix-turn-helix domain of transposase family ISL3 Mga PF05043.13 gi|15920704|ref|NP_376373.1| - 0.014 15.9 0.3 0.027 15.1 0.0 1.6 2 0 0 2 2 1 0 Mga helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|15920704|ref|NP_376373.1| - 0.018 14.7 0.2 0.082 12.6 0.0 2.1 2 0 0 2 2 2 0 Sigma-70, region 4 GerE PF00196.19 gi|15920704|ref|NP_376373.1| - 0.023 14.2 0.3 0.13 11.9 0.1 2.1 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family HTH_Crp_2 PF13545.6 gi|15920704|ref|NP_376373.1| - 0.025 14.5 0.0 0.11 12.5 0.0 2.0 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_IclR PF09339.10 gi|15920704|ref|NP_376373.1| - 0.027 14.3 0.0 0.043 13.6 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|15920704|ref|NP_376373.1| - 0.029 14.2 0.0 0.057 13.3 0.0 1.4 1 0 0 1 1 1 0 MarR family RuvB_C PF05491.13 gi|15920704|ref|NP_376373.1| - 0.03 14.2 0.1 0.078 12.9 0.1 1.7 1 0 0 1 1 1 0 RuvB C-terminal winged helix domain HTH_29 PF13551.6 gi|15920704|ref|NP_376373.1| - 0.036 14.1 0.0 0.058 13.4 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn helix DUF4423 PF14394.6 gi|15920704|ref|NP_376373.1| - 0.044 13.5 0.3 4.5 7.0 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF4423) TrmB PF01978.19 gi|15920704|ref|NP_376373.1| - 0.044 13.7 0.5 0.17 11.8 0.0 2.2 2 1 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_34 PF13601.6 gi|15920704|ref|NP_376373.1| - 0.067 13.4 0.0 0.12 12.5 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_27 PF13463.6 gi|15920704|ref|NP_376373.1| - 0.069 13.7 0.0 0.17 12.4 0.0 1.6 2 0 0 2 2 1 0 Winged helix DNA-binding domain HTH_50 PF18024.1 gi|15920704|ref|NP_376373.1| - 0.11 12.1 0.1 0.29 10.8 0.1 1.7 1 1 0 1 1 1 0 Helix-turn-helix domain NAD_binding_8 PF13450.6 gi|15920705|ref|NP_376374.1| - 1.8e-06 28.1 0.0 4.3e-06 26.9 0.0 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|15920705|ref|NP_376374.1| - 6.2e-06 25.6 0.3 3.5e-05 23.2 0.2 1.8 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|15920705|ref|NP_376374.1| - 6.3e-05 22.4 3.5 0.068 12.4 0.5 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|15920705|ref|NP_376374.1| - 0.00035 20.3 0.2 0.0081 15.8 0.3 2.2 1 1 0 2 2 2 1 FAD dependent oxidoreductase HI0933_like PF03486.14 gi|15920705|ref|NP_376374.1| - 0.00064 18.5 0.0 0.0094 14.7 0.0 2.1 2 0 0 2 2 2 1 HI0933-like protein GIDA PF01134.22 gi|15920705|ref|NP_376374.1| - 0.0016 17.6 0.2 0.0031 16.6 0.2 1.5 1 1 0 1 1 1 1 Glucose inhibited division protein A Lycopene_cycl PF05834.12 gi|15920705|ref|NP_376374.1| - 0.038 13.0 0.0 0.094 11.7 0.1 1.6 2 0 0 2 2 2 0 Lycopene cyclase protein DUF4488 PF14869.6 gi|15920705|ref|NP_376374.1| - 0.07 13.0 0.3 0.14 12.1 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4488) FAD_binding_3 PF01494.19 gi|15920705|ref|NP_376374.1| - 0.12 11.6 0.1 0.19 10.9 0.1 1.3 1 0 0 1 1 1 0 FAD binding domain FAD_binding_2 PF00890.24 gi|15920705|ref|NP_376374.1| - 0.12 11.4 0.1 0.18 10.9 0.1 1.2 1 0 0 1 1 1 0 FAD binding domain DUF1275 PF06912.11 gi|15920706|ref|NP_376375.1| - 0.017 15.0 2.0 0.017 15.0 2.0 1.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1275) CAAD PF14159.6 gi|15920706|ref|NP_376375.1| - 2.6 7.9 14.7 0.093 12.6 6.4 2.5 1 1 1 2 2 2 0 CAAD domains of cyanobacterial aminoacyl-tRNA synthetase Metallophos_2 PF12850.7 gi|15920707|ref|NP_376376.1| - 0.00052 20.3 0.0 0.00064 20.0 0.0 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain CCB1 PF12046.8 gi|15920707|ref|NP_376376.1| - 0.021 14.1 0.0 0.034 13.5 0.0 1.2 1 0 0 1 1 1 0 Cofactor assembly of complex C subunit B OST_IS PF18246.1 gi|15920708|ref|NP_376377.1| - 0.16 12.3 0.1 0.25 11.6 0.1 1.3 1 0 0 1 1 1 0 Oligosaccharyltransferase Insert domain FAD_binding_2 PF00890.24 gi|15920709|ref|NP_376378.1| - 0.0019 17.3 0.0 0.0029 16.8 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain Trp_halogenase PF04820.14 gi|15920709|ref|NP_376378.1| - 0.034 13.0 0.0 0.13 11.1 0.0 1.8 1 1 0 1 1 1 0 Tryptophan halogenase FAD_binding_3 PF01494.19 gi|15920709|ref|NP_376378.1| - 0.11 11.7 0.1 0.72 9.0 0.1 1.9 1 1 0 1 1 1 0 FAD binding domain DUF2070 PF09843.9 gi|15920710|ref|NP_376379.1| - 9.3e-110 367.5 4.5 1.1e-109 367.4 4.5 1.0 1 0 0 1 1 1 1 Predicted membrane protein (DUF2070) Hydrolase_6 PF13344.6 gi|15920712|ref|NP_376381.1| - 2e-24 85.6 0.0 3.2e-24 84.9 0.0 1.3 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|15920712|ref|NP_376381.1| - 4.6e-17 61.9 0.0 9e-17 60.9 0.0 1.5 1 0 0 1 1 1 1 HAD-hyrolase-like HAD_2 PF13419.6 gi|15920712|ref|NP_376381.1| - 3.9e-06 27.1 0.1 3e-05 24.2 0.0 2.2 1 1 1 2 2 2 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|15920712|ref|NP_376381.1| - 3.6e-05 24.1 0.0 6.6e-05 23.3 0.0 1.5 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase YhfZ_C PF14503.6 gi|15920712|ref|NP_376381.1| - 0.17 11.4 0.0 0.45 10.0 0.0 1.7 1 1 0 1 1 1 0 YhfZ C-terminal domain FAD_binding_2 PF00890.24 gi|15920713|ref|NP_376382.1| - 5.7e-111 371.6 0.6 7e-111 371.3 0.6 1.1 1 0 0 1 1 1 1 FAD binding domain Succ_DH_flav_C PF02910.20 gi|15920713|ref|NP_376382.1| - 6.8e-46 155.4 0.4 1e-45 154.9 0.4 1.3 1 0 0 1 1 1 1 Fumarate reductase flavoprotein C-term DAO PF01266.24 gi|15920713|ref|NP_376382.1| - 2.4e-06 27.4 1.5 7.6e-06 25.7 1.5 2.0 1 1 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|15920713|ref|NP_376382.1| - 3.1e-06 26.7 0.2 5.9e-06 25.8 0.2 1.4 1 0 0 1 1 1 1 FAD binding domain HI0933_like PF03486.14 gi|15920713|ref|NP_376382.1| - 1.3e-05 24.2 0.5 5.8e-05 22.0 0.4 1.9 2 0 0 2 2 2 1 HI0933-like protein Pyr_redox_2 PF07992.14 gi|15920713|ref|NP_376382.1| - 4.8e-05 22.7 0.9 4.8e-05 22.7 0.9 2.0 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|15920713|ref|NP_376382.1| - 0.00018 21.6 1.5 0.00066 19.9 1.5 2.0 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 gi|15920713|ref|NP_376382.1| - 0.00022 20.6 1.1 0.00063 19.0 0.4 2.1 2 0 0 2 2 2 1 Thi4 family GIDA PF01134.22 gi|15920713|ref|NP_376382.1| - 0.00033 19.9 3.0 0.00097 18.3 2.8 1.8 2 0 0 2 2 2 1 Glucose inhibited division protein A Lycopene_cycl PF05834.12 gi|15920713|ref|NP_376382.1| - 0.0011 18.2 0.2 0.002 17.2 0.2 1.4 1 0 0 1 1 1 1 Lycopene cyclase protein FAD_oxidored PF12831.7 gi|15920713|ref|NP_376382.1| - 0.015 14.6 3.3 0.037 13.4 3.5 1.5 2 0 0 2 2 2 0 FAD dependent oxidoreductase Pyr_redox PF00070.27 gi|15920713|ref|NP_376382.1| - 0.095 13.3 1.9 0.28 11.8 1.9 1.8 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase TMP-TENI PF02581.17 gi|15920713|ref|NP_376382.1| - 0.15 11.4 0.1 0.29 10.4 0.1 1.4 1 0 0 1 1 1 0 Thiamine monophosphate synthase AlaDh_PNT_C PF01262.21 gi|15920713|ref|NP_376382.1| - 0.19 11.0 1.2 0.37 10.1 1.2 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain 3HCDH_N PF02737.18 gi|15920713|ref|NP_376382.1| - 0.19 11.6 0.4 0.42 10.5 0.4 1.6 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Pyr_redox_3 PF13738.6 gi|15920713|ref|NP_376382.1| - 0.2 10.9 1.1 0.24 10.6 0.1 1.5 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.14 gi|15920713|ref|NP_376382.1| - 0.22 10.3 0.5 0.32 9.8 0.5 1.2 1 0 0 1 1 1 0 Tryptophan halogenase Fer2_3 PF13085.6 gi|15920714|ref|NP_376383.1| - 2.9e-33 114.1 0.0 5.4e-33 113.3 0.0 1.5 1 0 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer4_8 PF13183.6 gi|15920714|ref|NP_376383.1| - 5.4e-11 42.8 3.0 5.4e-11 42.8 3.0 1.9 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15920714|ref|NP_376383.1| - 8e-09 36.0 4.8 8e-09 36.0 4.8 2.4 2 1 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15920714|ref|NP_376383.1| - 9e-07 29.0 18.7 1.1e-05 25.4 9.8 3.1 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15920714|ref|NP_376383.1| - 2.6e-06 28.3 4.1 2.6e-06 28.3 4.1 2.8 3 0 0 3 3 3 1 4Fe-4S double cluster binding domain Fer4_18 PF13746.6 gi|15920714|ref|NP_376383.1| - 1.5e-05 25.1 1.2 0.065 13.4 0.1 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15920714|ref|NP_376383.1| - 2e-05 24.6 19.1 7.8e-05 22.7 10.0 2.6 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|15920714|ref|NP_376383.1| - 0.0001 22.7 18.1 0.0012 19.4 10.3 2.8 2 1 2 4 4 4 3 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15920714|ref|NP_376383.1| - 0.00022 21.1 16.1 0.004 17.2 1.1 3.2 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|15920714|ref|NP_376383.1| - 0.00057 20.0 9.8 0.053 13.7 0.2 2.7 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|15920714|ref|NP_376383.1| - 0.0016 18.2 20.9 0.0066 16.2 3.0 3.1 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_15 PF13459.6 gi|15920714|ref|NP_376383.1| - 0.0045 17.7 2.8 2.9 8.7 0.1 2.5 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|15920714|ref|NP_376383.1| - 0.01 16.3 8.4 0.1 13.2 1.2 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer2 PF00111.27 gi|15920714|ref|NP_376383.1| - 0.048 13.6 0.6 0.048 13.6 0.6 2.4 2 1 1 3 3 3 0 2Fe-2S iron-sulfur cluster binding domain Fer4_4 PF12800.7 gi|15920714|ref|NP_376383.1| - 0.098 13.2 0.7 0.098 13.2 0.7 3.1 3 0 0 3 3 3 0 4Fe-4S binding domain zf_PR_Knuckle PF18445.1 gi|15920714|ref|NP_376383.1| - 1.4 8.8 7.1 3.7 7.4 1.3 2.4 2 0 0 2 2 2 0 PR zinc knuckle motif Fer4_6 PF12837.7 gi|15920714|ref|NP_376383.1| - 2.1 8.6 21.7 0.38 10.9 2.5 2.9 3 0 0 3 3 3 0 4Fe-4S binding domain CCG PF02754.16 gi|15920715|ref|NP_376384.1| - 3.2e-32 110.6 0.4 2.6e-16 59.6 0.1 2.2 2 0 0 2 2 2 2 Cysteine-rich domain CxC4 PF18717.1 gi|15920715|ref|NP_376384.1| - 0.02 14.7 0.2 0.35 10.7 0.0 2.3 2 0 0 2 2 2 0 CxC4 like cysteine cluster associated with KDZ transposases VWA PF00092.28 gi|15920717|ref|NP_376386.1| - 2e-07 31.4 0.5 1.8e-06 28.3 0.0 2.5 2 1 1 3 3 3 1 von Willebrand factor type A domain VWA_3 PF13768.6 gi|15920717|ref|NP_376386.1| - 3.1e-06 27.2 0.0 9e-06 25.7 0.0 1.8 1 0 0 1 1 1 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 gi|15920717|ref|NP_376386.1| - 3.4e-06 26.6 0.0 6.2e-06 25.8 0.0 1.4 1 0 0 1 1 1 1 VWA domain containing CoxE-like protein VWA_2 PF13519.6 gi|15920717|ref|NP_376386.1| - 3e-05 24.6 0.0 0.00045 20.8 0.0 2.8 2 1 1 3 3 3 1 von Willebrand factor type A domain DUF29 PF01724.16 gi|15920717|ref|NP_376386.1| - 0.14 12.4 3.1 0.37 11.0 3.1 1.7 1 0 0 1 1 1 0 Domain of unknown function DUF29 PP2C_2 PF13672.6 gi|15920717|ref|NP_376386.1| - 0.26 10.9 0.7 3.1 7.4 0.0 2.3 2 1 0 2 2 2 0 Protein phosphatase 2C AAA_5 PF07728.14 gi|15920718|ref|NP_376387.1| - 1.7e-28 99.4 0.0 3.5e-28 98.3 0.0 1.6 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA_lid_8 PF17868.1 gi|15920718|ref|NP_376387.1| - 6.7e-08 32.3 0.0 2.3e-07 30.6 0.0 2.0 1 0 0 1 1 1 1 AAA lid domain AAA_16 PF13191.6 gi|15920718|ref|NP_376387.1| - 3.7e-05 24.2 0.1 0.00013 22.4 0.0 2.0 2 0 0 2 2 2 1 AAA ATPase domain AAA_3 PF07726.11 gi|15920718|ref|NP_376387.1| - 6.2e-05 22.9 0.0 0.0001 22.2 0.0 1.3 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) Mg_chelatase PF01078.21 gi|15920718|ref|NP_376387.1| - 7.8e-05 22.2 0.1 0.00068 19.1 0.0 2.1 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI AAA PF00004.29 gi|15920718|ref|NP_376387.1| - 8.1e-05 23.1 0.0 0.00026 21.4 0.0 1.9 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|15920718|ref|NP_376387.1| - 0.00089 19.5 0.2 0.0051 17.1 0.0 2.4 2 2 1 3 3 3 1 AAA domain MCM PF00493.23 gi|15920718|ref|NP_376387.1| - 0.0028 16.8 0.0 0.0069 15.5 0.0 1.6 1 0 0 1 1 1 1 MCM P-loop domain Sigma54_activat PF00158.26 gi|15920718|ref|NP_376387.1| - 0.0036 17.0 0.0 0.011 15.4 0.0 1.8 1 1 0 1 1 1 1 Sigma-54 interaction domain PMC2NT PF08066.12 gi|15920718|ref|NP_376387.1| - 0.0064 17.2 0.2 0.018 15.7 0.2 1.8 1 0 0 1 1 1 1 PMC2NT (NUC016) domain EF-hand_14 PF17959.1 gi|15920718|ref|NP_376387.1| - 0.017 15.5 0.4 4.7 7.6 0.1 2.5 2 0 0 2 2 2 0 EF-hand domain AAA_7 PF12775.7 gi|15920718|ref|NP_376387.1| - 0.029 13.9 0.0 0.051 13.1 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region IstB_IS21 PF01695.17 gi|15920718|ref|NP_376387.1| - 0.06 13.1 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein RuvB_N PF05496.12 gi|15920718|ref|NP_376387.1| - 0.07 12.9 0.1 0.34 10.6 0.1 2.1 1 1 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain AAA_33 PF13671.6 gi|15920718|ref|NP_376387.1| - 0.11 12.6 0.0 0.22 11.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain tRNA_anti-codon PF01336.25 gi|15920719|ref|NP_376388.1| - 7.7e-07 29.0 0.3 1.1e-06 28.5 0.3 1.3 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain REPA_OB_2 PF16900.5 gi|15920719|ref|NP_376388.1| - 0.0028 17.5 0.8 0.0036 17.2 0.8 1.1 1 0 0 1 1 1 1 Replication protein A OB domain PqqD PF05402.12 gi|15920720|ref|NP_376389.1| - 7.4e-14 51.8 0.2 9.3e-14 51.5 0.2 1.1 1 0 0 1 1 1 1 Coenzyme PQQ synthesis protein D (PqqD) DUF4569 PF15133.6 gi|15920720|ref|NP_376389.1| - 0.0053 16.5 0.4 0.0071 16.1 0.4 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4569) DUF5440 PF17509.2 gi|15920720|ref|NP_376389.1| - 0.074 12.6 0.0 0.1 12.2 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5440) DUF4777 PF16007.5 gi|15920720|ref|NP_376389.1| - 0.089 13.1 0.2 0.17 12.2 0.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4777) MoeA_N PF03453.17 gi|15920721|ref|NP_376390.1| - 4e-34 117.6 0.0 7.3e-34 116.8 0.0 1.4 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 gi|15920721|ref|NP_376390.1| - 5.2e-29 100.8 0.0 9e-29 100.0 0.0 1.3 1 0 0 1 1 1 1 Probable molybdopterin binding domain MoeA_C PF03454.15 gi|15920721|ref|NP_376390.1| - 3.9e-11 43.0 0.0 1.7e-10 40.9 0.0 2.1 2 0 0 2 2 2 1 MoeA C-terminal region (domain IV) GHMP_kinases_N PF00288.26 gi|15920722|ref|NP_376391.1| - 4.5e-13 49.2 1.5 4.5e-13 49.2 1.5 1.8 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|15920722|ref|NP_376391.1| - 4.5e-08 33.4 0.4 1.2e-07 31.9 0.0 1.9 2 0 0 2 2 2 1 GHMP kinases C terminal Cys_Met_Meta_PP PF01053.20 gi|15920723|ref|NP_376392.1| - 1.2e-122 409.1 0.1 1.4e-122 408.9 0.1 1.0 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Aminotran_1_2 PF00155.21 gi|15920723|ref|NP_376392.1| - 5.5e-08 32.4 0.0 1.1e-07 31.4 0.0 1.4 1 1 0 1 1 1 1 Aminotransferase class I and II Aminotran_5 PF00266.19 gi|15920723|ref|NP_376392.1| - 0.00063 18.8 0.0 0.0039 16.2 0.0 2.0 2 0 0 2 2 2 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|15920723|ref|NP_376392.1| - 0.016 14.5 0.0 0.1 11.8 0.0 2.0 1 1 0 1 1 1 0 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 gi|15920723|ref|NP_376392.1| - 0.032 13.6 0.1 0.26 10.6 0.0 2.2 2 1 0 2 2 2 0 DegT/DnrJ/EryC1/StrS aminotransferase family DUF1152 PF06626.12 gi|15920726|ref|NP_376395.1| - 4.5e-114 380.6 0.0 5.1e-114 380.4 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1152) DUF4878 PF12870.7 gi|15920727|ref|NP_376396.1| - 0.14 12.5 0.1 0.53 10.6 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4878) KH_1 PF00013.29 gi|15920728|ref|NP_376397.1| - 1.6e-05 24.6 10.0 5.2e-05 23.0 4.0 2.7 2 1 0 2 2 2 2 KH domain RNA_pol_Rpb6 PF01192.22 gi|15920728|ref|NP_376397.1| - 0.052 13.5 0.8 0.27 11.2 0.0 2.3 2 0 0 2 2 2 0 RNA polymerase Rpb6 RIO1 PF01163.22 gi|15920729|ref|NP_376398.1| - 6.8e-45 153.0 0.7 7.8e-45 152.8 0.7 1.0 1 0 0 1 1 1 1 RIO1 family APH PF01636.23 gi|15920729|ref|NP_376398.1| - 0.00013 22.0 0.0 0.00018 21.5 0.0 1.2 1 0 0 1 1 1 1 Phosphotransferase enzyme family Pkinase_fungal PF17667.1 gi|15920729|ref|NP_376398.1| - 0.0004 19.3 0.9 0.00049 19.0 0.9 1.1 1 0 0 1 1 1 1 Fungal protein kinase YxiJ PF14176.6 gi|15920729|ref|NP_376398.1| - 0.017 15.6 0.1 0.022 15.2 0.1 1.1 1 0 0 1 1 1 0 YxiJ-like protein Kdo PF06293.14 gi|15920729|ref|NP_376398.1| - 0.055 12.8 0.0 0.065 12.6 0.0 1.1 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Fructosamin_kin PF03881.14 gi|15920729|ref|NP_376398.1| - 0.064 12.4 0.0 0.12 11.6 0.0 1.3 1 1 0 1 1 1 0 Fructosamine kinase Sigma70_r1_1 PF03979.14 gi|15920729|ref|NP_376398.1| - 0.073 13.1 6.1 1.6 8.8 0.4 2.5 2 0 0 2 2 2 0 Sigma-70 factor, region 1.1 eIF-1a PF01176.19 gi|15920730|ref|NP_376399.1| - 1.9e-20 72.4 0.1 2.8e-20 71.9 0.1 1.3 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 Thiolase_N PF00108.23 gi|15920731|ref|NP_376400.1| - 1.5e-86 290.0 1.0 1.8e-86 289.7 1.0 1.1 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|15920731|ref|NP_376400.1| - 1.7e-36 124.5 0.0 1.2e-35 121.8 0.0 2.1 2 0 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|15920731|ref|NP_376400.1| - 2.4e-07 30.6 3.9 3.9e-06 26.6 2.9 2.2 1 1 0 2 2 2 1 Beta-ketoacyl synthase, N-terminal domain SpoVAD PF07451.11 gi|15920731|ref|NP_376400.1| - 0.022 13.4 0.3 0.055 12.2 0.1 1.6 2 0 0 2 2 2 0 Stage V sporulation protein AD (SpoVAD) FAE1_CUT1_RppA PF08392.12 gi|15920731|ref|NP_376400.1| - 0.16 11.2 0.2 0.78 9.0 0.2 1.9 2 0 0 2 2 2 0 FAE1/Type III polyketide synthase-like protein ACP_syn_III PF08545.10 gi|15920731|ref|NP_376400.1| - 0.32 10.9 2.2 0.77 9.7 1.0 2.0 2 0 0 2 2 2 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Radical_SAM PF04055.21 gi|15920732|ref|NP_376401.1| - 1.4e-29 103.6 0.4 1.9e-28 100.0 0.2 2.2 2 0 0 2 2 2 1 Radical SAM superfamily UPF0004 PF00919.20 gi|15920732|ref|NP_376401.1| - 1.7e-22 79.3 0.1 3.6e-22 78.2 0.1 1.6 1 0 0 1 1 1 1 Uncharacterized protein family UPF0004 TRAM PF01938.20 gi|15920732|ref|NP_376401.1| - 1.4e-09 37.8 0.0 3e-09 36.8 0.0 1.6 1 0 0 1 1 1 1 TRAM domain TRAM_2 PF18693.1 gi|15920732|ref|NP_376401.1| - 0.018 15.2 0.0 0.044 13.9 0.0 1.7 1 0 0 1 1 1 0 TRAM domain Chlorosome_CsmC PF11098.8 gi|15920732|ref|NP_376401.1| - 0.02 14.9 0.0 1.4 8.9 0.0 2.4 2 0 0 2 2 2 0 Chlorosome envelope protein C Ran-binding PF05508.11 gi|15920732|ref|NP_376401.1| - 0.04 12.9 0.2 0.18 10.8 0.2 2.0 1 1 0 1 1 1 0 RanGTP-binding protein BKACE PF05853.12 gi|15920732|ref|NP_376401.1| - 0.15 11.4 0.4 0.49 9.7 0.0 1.9 3 0 0 3 3 3 0 beta-keto acid cleavage enzyme HMGL-like PF00682.19 gi|15920732|ref|NP_376401.1| - 0.19 11.2 0.4 0.7 9.4 0.1 2.2 2 1 0 2 2 2 0 HMGL-like eIF-5_eIF-2B PF01873.17 gi|15920733|ref|NP_376402.1| - 3.8e-33 113.9 0.8 4.7e-33 113.5 0.8 1.1 1 0 0 1 1 1 1 Domain found in IF2B/IF5 DUF4003 PF13170.6 gi|15920733|ref|NP_376402.1| - 0.043 13.2 0.1 0.069 12.5 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF4003) Elf1 PF05129.13 gi|15920733|ref|NP_376402.1| - 0.05 13.6 0.7 0.087 12.9 0.7 1.4 1 0 0 1 1 1 0 Transcription elongation factor Elf1 like Lar_restr_allev PF14354.6 gi|15920733|ref|NP_376402.1| - 0.18 12.2 1.1 0.77 10.2 1.1 2.0 1 1 0 1 1 1 0 Restriction alleviation protein Lar Cys_rich_KTR PF14205.6 gi|15920733|ref|NP_376402.1| - 1.5 8.7 5.3 4.4 7.2 0.1 2.9 2 1 1 3 3 3 0 Cysteine-rich KTR DUF424 PF04242.13 gi|15920734|ref|NP_376403.1| - 1.6e-24 86.0 0.8 1.8e-24 85.8 0.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF424) NMD3 PF04981.13 gi|15920735|ref|NP_376404.1| - 2.4e-43 148.4 3.3 2.7e-43 148.2 3.3 1.0 1 0 0 1 1 1 1 NMD3 family zf-C4pol PF14260.6 gi|15920735|ref|NP_376404.1| - 0.028 14.9 1.3 7.7 7.1 0.0 2.5 2 1 0 2 2 2 0 C4-type zinc-finger of DNA polymerase delta Rpr2 PF04032.16 gi|15920735|ref|NP_376404.1| - 0.24 11.7 0.3 0.24 11.7 0.3 2.9 3 0 0 3 3 3 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Nudix_N_2 PF14803.6 gi|15920735|ref|NP_376404.1| - 0.31 11.0 3.1 34 4.5 0.1 3.3 3 0 0 3 3 3 0 Nudix N-terminal DUF4428 PF14471.6 gi|15920735|ref|NP_376404.1| - 0.4 10.6 11.2 1.2 9.1 1.2 4.2 3 1 1 4 4 4 0 Domain of unknown function (DUF4428) RNase_HII PF01351.18 gi|15920736|ref|NP_376405.1| - 1.1e-45 156.0 0.0 1.2e-45 155.8 0.0 1.0 1 0 0 1 1 1 1 Ribonuclease HII S-AdoMet_synt_C PF02773.16 gi|15920736|ref|NP_376405.1| - 0.16 11.9 0.3 0.3 11.1 0.3 1.5 1 1 0 1 1 1 0 S-adenosylmethionine synthetase, C-terminal domain TGS PF02824.21 gi|15920737|ref|NP_376406.1| - 2.2e-22 78.8 0.0 4.6e-22 77.8 0.0 1.5 1 0 0 1 1 1 1 TGS domain MMR_HSR1_Xtn PF16897.5 gi|15920737|ref|NP_376406.1| - 5.8e-06 26.3 0.4 6e-05 23.0 0.4 2.4 1 1 0 1 1 1 1 C-terminal region of MMR_HSR1 domain YchF-GTPase_C PF06071.13 gi|15920737|ref|NP_376406.1| - 0.00021 21.4 0.2 0.052 13.7 0.2 3.0 1 1 0 1 1 1 1 Protein of unknown function (DUF933) Ish1 PF10281.9 gi|15920737|ref|NP_376406.1| - 0.034 14.5 0.1 2.8 8.3 0.0 2.6 2 0 0 2 2 2 0 Putative stress-responsive nuclear envelope protein Ub-RnfH PF03658.14 gi|15920737|ref|NP_376406.1| - 0.13 12.7 0.0 0.33 11.4 0.0 1.6 1 0 0 1 1 1 0 RnfH family Ubiquitin T2SSF PF00482.23 gi|15920738|ref|NP_376407.1| - 1.1e-18 67.4 0.9 1.4e-11 44.4 0.2 5.1 6 0 0 6 6 6 3 Type II secretion system (T2SS), protein F T2SSE PF00437.20 gi|15920739|ref|NP_376408.1| - 2e-45 155.0 0.0 3.3e-45 154.3 0.0 1.4 1 0 0 1 1 1 1 Type II/IV secretion system protein SRP54 PF00448.22 gi|15920739|ref|NP_376408.1| - 0.023 14.3 0.0 0.039 13.6 0.0 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_19 PF13245.6 gi|15920739|ref|NP_376408.1| - 0.032 14.6 0.1 0.44 10.9 0.1 2.3 1 1 0 1 1 1 0 AAA domain Viral_helicase1 PF01443.18 gi|15920739|ref|NP_376408.1| - 0.033 13.9 0.0 0.053 13.3 0.0 1.3 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase ABC_tran PF00005.27 gi|15920739|ref|NP_376408.1| - 0.051 14.1 0.0 0.22 12.0 0.0 1.9 2 0 0 2 2 2 0 ABC transporter AAA_16 PF13191.6 gi|15920739|ref|NP_376408.1| - 0.18 12.2 0.0 0.41 11.0 0.0 1.6 1 0 0 1 1 1 0 AAA ATPase domain AAA_30 PF13604.6 gi|15920739|ref|NP_376408.1| - 0.19 11.4 0.0 0.41 10.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain DUF87 PF01935.17 gi|15920739|ref|NP_376408.1| - 2 8.5 4.9 0.76 9.8 1.6 2.0 2 1 0 2 2 2 0 Helicase HerA, central domain Glyco_tranf_2_3 PF13641.6 gi|15920740|ref|NP_376409.1| - 1.1e-25 90.9 0.0 1.5e-25 90.5 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|15920740|ref|NP_376409.1| - 1.3e-24 87.2 0.3 2.2e-24 86.5 0.3 1.3 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glycos_transf_2 PF00535.26 gi|15920740|ref|NP_376409.1| - 2.6e-22 79.5 0.2 3.9e-22 78.8 0.2 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_2 PF10111.9 gi|15920740|ref|NP_376409.1| - 1.1e-11 44.8 1.5 2.8e-11 43.4 1.5 1.6 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 gi|15920740|ref|NP_376409.1| - 1.9e-11 43.7 0.0 4.6e-11 42.5 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferase family 21 Pyrophosphatase PF00719.19 gi|15920741|ref|NP_376410.1| - 3.5e-57 192.7 0.1 4e-57 192.5 0.1 1.0 1 0 0 1 1 1 1 Inorganic pyrophosphatase HD_3 PF13023.6 gi|15920742|ref|NP_376411.1| - 7.1e-18 65.1 0.0 4e-17 62.6 0.0 1.9 1 1 0 1 1 1 1 HD domain HD_2 PF12917.7 gi|15920742|ref|NP_376411.1| - 1.4e-15 57.5 0.7 2.6e-15 56.6 0.7 1.4 1 1 0 1 1 1 1 HD containing hydrolase-like enzyme HD PF01966.22 gi|15920742|ref|NP_376411.1| - 3.5e-08 33.7 0.6 1.7e-07 31.5 0.2 2.2 2 1 0 2 2 2 1 HD domain HDOD PF08668.12 gi|15920742|ref|NP_376411.1| - 0.0024 17.4 0.0 0.0039 16.7 0.0 1.3 1 0 0 1 1 1 1 HDOD domain zf-ZPR1 PF03367.13 gi|15920742|ref|NP_376411.1| - 0.095 12.6 0.2 0.12 12.2 0.2 1.2 1 0 0 1 1 1 0 ZPR1 zinc-finger domain Phos_pyr_kin PF08543.12 gi|15920743|ref|NP_376412.1| - 2.6e-71 239.9 0.1 3.4e-71 239.5 0.1 1.2 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase ThiP_synth PF10120.9 gi|15920743|ref|NP_376412.1| - 3.1e-48 163.5 0.0 8.6e-48 162.1 0.0 1.8 2 0 0 2 2 2 1 Thiamine-phosphate synthase PfkB PF00294.24 gi|15920743|ref|NP_376412.1| - 2.9e-06 26.8 0.0 4.7e-06 26.1 0.0 1.2 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Carb_kinase PF01256.17 gi|15920743|ref|NP_376412.1| - 0.04 13.4 0.0 0.068 12.6 0.0 1.4 1 0 0 1 1 1 0 Carbohydrate kinase MoaE PF02391.17 gi|15920744|ref|NP_376413.1| - 4.8e-19 68.7 0.0 7.6e-19 68.1 0.0 1.3 1 0 0 1 1 1 1 MoaE protein ThiS PF02597.20 gi|15920744|ref|NP_376413.1| - 2.3e-10 41.0 0.0 7.5e-10 39.3 0.0 1.9 2 0 0 2 2 2 1 ThiS family Fer4_8 PF13183.6 gi|15920746|ref|NP_376415.1| - 8.5e-07 29.3 3.0 1.6e-06 28.4 3.0 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15920746|ref|NP_376415.1| - 3.5e-06 27.5 4.2 6.9e-06 26.6 4.2 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain FAD_binding_4 PF01565.23 gi|15920746|ref|NP_376415.1| - 6.3e-06 26.0 0.0 1.2e-05 25.1 0.0 1.5 1 0 0 1 1 1 1 FAD binding domain Fer4_17 PF13534.6 gi|15920746|ref|NP_376415.1| - 2.4e-05 24.8 2.5 4.7e-05 23.8 2.5 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15920746|ref|NP_376415.1| - 0.00021 21.3 6.3 0.00022 21.3 4.5 1.9 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15920746|ref|NP_376415.1| - 0.00069 19.7 2.9 0.0025 17.9 3.1 1.9 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15920746|ref|NP_376415.1| - 0.0082 16.2 7.0 0.37 10.9 7.9 2.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15920746|ref|NP_376415.1| - 0.014 15.5 1.9 0.014 15.5 1.9 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4 PF00037.27 gi|15920746|ref|NP_376415.1| - 0.021 14.6 2.9 0.021 14.6 2.9 3.1 3 0 0 3 3 3 0 4Fe-4S binding domain Fer4_18 PF13746.6 gi|15920746|ref|NP_376415.1| - 0.08 13.1 2.3 1.7 8.9 0.1 2.7 2 0 0 2 2 2 0 4Fe-4S dicluster domain 4HB PF17947.1 gi|15920746|ref|NP_376415.1| - 0.12 12.5 1.2 0.29 11.2 0.1 2.3 2 0 0 2 2 2 0 Four helical bundle domain Fer4_22 PF17179.4 gi|15920746|ref|NP_376415.1| - 0.29 12.0 2.4 11 7.0 0.2 2.5 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15920746|ref|NP_376415.1| - 3.9 8.2 9.0 0.93 10.2 2.0 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_16 PF13484.6 gi|15920746|ref|NP_376415.1| - 6.4 7.8 9.8 26 5.8 2.7 2.8 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain GHMP_kinases_N PF00288.26 gi|15920747|ref|NP_376416.1| - 2.1e-07 31.0 0.1 3.5e-07 30.4 0.1 1.3 1 0 0 1 1 1 1 GHMP kinases N terminal domain PPS_PS PF02006.16 gi|15920748|ref|NP_376417.1| - 3.8e-79 264.3 4.6 4.5e-79 264.1 4.6 1.1 1 0 0 1 1 1 1 Phosphopantothenate/pantothenate synthetase AAA_31 PF13614.6 gi|15920748|ref|NP_376417.1| - 0.067 13.1 1.8 0.11 12.4 0.3 2.0 2 1 0 2 2 2 0 AAA domain Arabinose_Isome PF02610.15 gi|15920748|ref|NP_376417.1| - 0.076 12.2 1.0 0.093 11.9 0.1 1.4 2 0 0 2 2 2 0 L-arabinose isomerase Pantoate_transf PF02548.15 gi|15920749|ref|NP_376418.1| - 1e-107 359.4 0.0 1.1e-107 359.2 0.0 1.0 1 0 0 1 1 1 1 Ketopantoate hydroxymethyltransferase PEP_mutase PF13714.6 gi|15920749|ref|NP_376418.1| - 9.7e-07 28.5 0.3 4.2e-05 23.1 0.3 2.7 1 1 0 1 1 1 1 Phosphoenolpyruvate phosphomutase Asp_Glu_race PF01177.22 gi|15920749|ref|NP_376418.1| - 0.14 12.0 0.0 0.38 10.6 0.0 1.8 2 0 0 2 2 2 0 Asp/Glu/Hydantoin racemase Speriolin_C PF15059.6 gi|15920750|ref|NP_376419.1| - 0.042 14.0 0.5 0.22 11.6 0.1 2.0 1 1 1 2 2 2 0 Speriolin C-terminus ABC_tran PF00005.27 gi|15920751|ref|NP_376420.1| - 7.9e-26 91.2 0.0 1.1e-25 90.7 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|15920751|ref|NP_376420.1| - 4.8e-09 36.5 0.4 0.0015 18.4 0.2 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|15920751|ref|NP_376420.1| - 0.00034 20.1 0.9 0.1 12.0 0.1 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|15920751|ref|NP_376420.1| - 0.00078 20.0 0.9 0.0018 18.8 0.5 1.7 2 0 0 2 2 2 1 AAA domain AAA_30 PF13604.6 gi|15920751|ref|NP_376420.1| - 0.00098 18.9 0.2 0.002 17.9 0.1 1.5 2 0 0 2 2 2 1 AAA domain AAA_15 PF13175.6 gi|15920751|ref|NP_376420.1| - 0.01 15.6 0.2 0.11 12.2 0.0 2.0 1 1 0 2 2 2 0 AAA ATPase domain Peptidase_M23 PF01551.22 gi|15920751|ref|NP_376420.1| - 0.021 15.0 0.1 22 5.4 0.0 3.0 2 1 0 3 3 3 0 Peptidase family M23 AAA PF00004.29 gi|15920751|ref|NP_376420.1| - 0.031 14.7 0.0 0.049 14.0 0.0 1.5 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_27 PF13514.6 gi|15920751|ref|NP_376420.1| - 0.044 13.4 0.0 0.072 12.7 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|15920751|ref|NP_376420.1| - 0.045 13.5 0.1 0.1 12.4 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain SRP54 PF00448.22 gi|15920751|ref|NP_376420.1| - 0.051 13.2 0.1 0.098 12.3 0.1 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_22 PF13401.6 gi|15920751|ref|NP_376420.1| - 0.079 13.2 0.1 0.26 11.5 0.1 1.8 1 1 0 1 1 1 0 AAA domain Zeta_toxin PF06414.12 gi|15920751|ref|NP_376420.1| - 0.082 12.2 0.0 0.13 11.5 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin ABC2_membrane_3 PF12698.7 gi|15920752|ref|NP_376421.1| - 1.5e-18 67.0 49.4 1.9e-18 66.7 49.4 1.1 1 0 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|15920752|ref|NP_376421.1| - 0.00038 20.4 16.3 0.00038 20.4 16.3 3.9 2 1 2 4 4 4 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|15920752|ref|NP_376421.1| - 0.011 15.0 43.5 0.19 11.0 43.5 3.1 1 1 0 1 1 1 0 ABC-2 family transporter protein BRCT_2 PF16589.5 gi|15920752|ref|NP_376421.1| - 0.016 15.6 0.1 0.32 11.4 0.1 2.3 2 0 0 2 2 2 0 BRCT domain, a BRCA1 C-terminus domain PAP2_3 PF14378.6 gi|15920752|ref|NP_376421.1| - 1.4 8.5 15.0 3 7.5 3.0 3.5 2 1 2 4 4 4 0 PAP2 superfamily AsnC_trans_reg PF01037.21 gi|15920753|ref|NP_376422.1| - 1.3e-11 44.3 0.2 1.4e-11 44.2 0.2 1.1 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain DUF3829 PF12889.7 gi|15920753|ref|NP_376422.1| - 0.046 13.2 0.1 0.051 13.0 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3829) HMA PF00403.26 gi|15920753|ref|NP_376422.1| - 0.047 14.1 0.7 0.063 13.7 0.7 1.2 1 0 0 1 1 1 0 Heavy-metal-associated domain HipN PF18253.1 gi|15920753|ref|NP_376422.1| - 0.21 11.3 0.0 0.32 10.7 0.0 1.3 1 0 0 1 1 1 0 Hsp70-interacting protein N N-terminal domain RHH_1 PF01402.21 gi|15920754|ref|NP_376423.1| - 2.8e-09 36.6 0.3 3.9e-09 36.1 0.3 1.3 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family RHH_3 PF12651.7 gi|15920754|ref|NP_376423.1| - 8.9e-05 22.4 0.4 0.00013 21.8 0.4 1.3 1 0 0 1 1 1 1 Ribbon-helix-helix domain Lactamase_B_3 PF13483.6 gi|15920755|ref|NP_376424.1| - 2.2e-33 115.5 0.3 2.6e-33 115.2 0.3 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|15920755|ref|NP_376424.1| - 4.5e-14 52.4 1.3 1.8e-09 37.4 0.0 2.1 1 1 1 2 2 2 2 Beta-lactamase superfamily domain DUF2325 PF10087.9 gi|15920755|ref|NP_376424.1| - 0.016 15.3 0.1 1.7 8.8 0.0 2.3 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2325) XFP_C PF09363.10 gi|15920755|ref|NP_376424.1| - 0.026 14.0 0.0 0.045 13.2 0.0 1.3 1 0 0 1 1 1 0 XFP C-terminal domain HMGL-like PF00682.19 gi|15920756|ref|NP_376425.1| - 2.2e-93 312.6 2.1 2.9e-93 312.2 2.1 1.2 1 0 0 1 1 1 1 HMGL-like MAF_flag10 PF01973.18 gi|15920757|ref|NP_376426.1| - 3.7e-26 91.9 0.5 5.2e-26 91.4 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF115 TPK_catalytic PF04263.16 gi|15920757|ref|NP_376426.1| - 0.00022 21.2 0.1 0.00056 19.9 0.1 1.6 1 1 0 1 1 1 1 Thiamin pyrophosphokinase, catalytic domain Vps16_N PF04841.13 gi|15920757|ref|NP_376426.1| - 0.07 11.9 0.1 0.09 11.5 0.1 1.1 1 0 0 1 1 1 0 Vps16, N-terminal region HEPN PF05168.14 gi|15920759|ref|NP_376428.1| - 1.3e-05 25.3 1.5 1.7e-05 24.9 1.5 1.2 1 0 0 1 1 1 1 HEPN domain AAA_5 PF07728.14 gi|15920759|ref|NP_376428.1| - 0.11 12.5 0.1 0.45 10.5 0.0 1.9 1 1 1 2 2 2 0 AAA domain (dynein-related subfamily) MYO10_CC PF16735.5 gi|15920761|ref|NP_376430.1| - 0.041 14.0 0.2 0.1 12.7 0.2 1.7 1 0 0 1 1 1 0 Unconventional myosin-X coiled coil domain Arg_repressor PF01316.21 gi|15920761|ref|NP_376430.1| - 0.09 12.5 1.7 0.6 9.9 0.3 2.3 2 0 0 2 2 2 0 Arginine repressor, DNA binding domain DUF4404 PF14357.6 gi|15920761|ref|NP_376430.1| - 0.17 12.5 0.6 19 6.0 0.2 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4404) PTPS PF01242.19 gi|15920762|ref|NP_376431.1| - 3.5e-23 81.9 0.0 4.7e-23 81.5 0.0 1.0 1 0 0 1 1 1 1 6-pyruvoyl tetrahydropterin synthase Ntox16 PF15523.6 gi|15920763|ref|NP_376432.1| - 0.066 13.5 0.1 0.22 11.8 0.1 1.9 1 1 0 1 1 1 0 Novel toxin 16 DUF4346 PF14251.6 gi|15920764|ref|NP_376433.1| - 5.6e-05 23.2 0.0 0.00013 22.0 0.0 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4346) CdhD PF03599.16 gi|15920764|ref|NP_376433.1| - 0.012 14.3 0.4 0.41 9.3 0.1 2.2 2 0 0 2 2 2 0 CO dehydrogenase/acetyl-CoA synthase delta subunit Pyr_redox_2 PF07992.14 gi|15920765|ref|NP_376434.1| - 3.4e-54 184.1 0.8 4.3e-54 183.8 0.8 1.0 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|15920765|ref|NP_376434.1| - 1.3e-23 83.7 2.4 2e-23 83.1 0.7 1.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|15920765|ref|NP_376434.1| - 1.4e-16 60.8 1.3 2.2e-15 57.0 0.2 2.8 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|15920765|ref|NP_376434.1| - 7.3e-09 35.2 2.5 0.035 13.2 0.1 4.0 3 1 0 4 4 4 3 Glucose inhibited division protein A K_oxygenase PF13434.6 gi|15920765|ref|NP_376434.1| - 2.1e-07 30.4 0.1 0.0036 16.5 0.0 3.1 2 1 1 3 3 3 3 L-lysine 6-monooxygenase (NADPH-requiring) HI0933_like PF03486.14 gi|15920765|ref|NP_376434.1| - 1e-05 24.4 0.7 0.013 14.2 0.0 3.1 3 0 0 3 3 3 2 HI0933-like protein FAD_oxidored PF12831.7 gi|15920765|ref|NP_376434.1| - 3.2e-05 23.5 1.2 0.00074 19.0 0.0 2.7 2 1 1 3 3 3 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|15920765|ref|NP_376434.1| - 9.2e-05 21.7 3.4 0.16 11.0 0.0 3.7 3 1 1 5 5 5 2 FAD binding domain Thi4 PF01946.17 gi|15920765|ref|NP_376434.1| - 0.00046 19.5 1.2 0.3 10.3 0.0 3.0 3 0 0 3 3 3 2 Thi4 family NAD_binding_7 PF13241.6 gi|15920765|ref|NP_376434.1| - 0.0022 18.4 0.2 0.049 14.1 0.1 2.3 2 0 0 2 2 2 1 Putative NAD(P)-binding FMO-like PF00743.19 gi|15920765|ref|NP_376434.1| - 0.025 13.0 0.0 0.033 12.6 0.0 1.2 1 0 0 1 1 1 0 Flavin-binding monooxygenase-like NAD_binding_9 PF13454.6 gi|15920765|ref|NP_376434.1| - 0.08 12.9 0.1 5.7 6.9 0.0 2.9 3 0 0 3 3 3 0 FAD-NAD(P)-binding FAD_binding_3 PF01494.19 gi|15920765|ref|NP_376434.1| - 0.081 12.1 0.0 1.4 8.1 0.0 2.1 2 0 0 2 2 2 0 FAD binding domain AlaDh_PNT_C PF01262.21 gi|15920765|ref|NP_376434.1| - 0.1 11.9 0.3 4.2 6.6 0.0 2.7 2 1 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain Inositol_P PF00459.25 gi|15920766|ref|NP_376435.1| - 2.8e-22 79.5 0.0 3e-22 79.4 0.0 1.1 1 0 0 1 1 1 1 Inositol monophosphatase family FBPase PF00316.20 gi|15920766|ref|NP_376435.1| - 4.2e-05 23.1 0.0 7.4e-05 22.3 0.0 1.4 1 0 0 1 1 1 1 Fructose-1-6-bisphosphatase, N-terminal domain AAA PF00004.29 gi|15920767|ref|NP_376436.1| - 7.7e-84 278.7 0.0 6.7e-41 139.8 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|15920767|ref|NP_376436.1| - 5.9e-25 86.8 3.8 2.8e-12 46.2 0.5 2.9 2 0 0 2 2 2 2 AAA+ lid domain AAA_2 PF07724.14 gi|15920767|ref|NP_376436.1| - 2.3e-13 50.6 0.2 4.9e-06 26.8 0.0 3.1 4 0 0 4 4 2 2 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 gi|15920767|ref|NP_376436.1| - 6.7e-13 49.1 0.6 0.0011 19.2 0.0 5.2 4 2 1 5 5 4 2 AAA domain AAA_16 PF13191.6 gi|15920767|ref|NP_376436.1| - 2.3e-12 47.6 0.0 0.00022 21.6 0.0 4.1 2 2 0 2 2 2 2 AAA ATPase domain Vps4_C PF09336.10 gi|15920767|ref|NP_376436.1| - 2.4e-12 46.6 0.4 2.3e-05 24.3 0.0 3.4 3 0 0 3 3 3 2 Vps4 C terminal oligomerisation domain AAA_14 PF13173.6 gi|15920767|ref|NP_376436.1| - 2.6e-12 46.9 0.0 4.3e-06 26.8 0.0 2.9 2 0 0 2 2 2 2 AAA domain AAA_5 PF07728.14 gi|15920767|ref|NP_376436.1| - 3.3e-12 46.6 0.5 1.7e-05 24.9 0.5 3.6 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) RuvB_N PF05496.12 gi|15920767|ref|NP_376436.1| - 2.7e-11 43.5 0.0 9.2e-06 25.5 0.0 2.6 2 0 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_18 PF13238.6 gi|15920767|ref|NP_376436.1| - 7e-11 42.8 0.0 9.6e-05 22.9 0.0 2.7 2 1 0 2 2 2 2 AAA domain RNA_helicase PF00910.22 gi|15920767|ref|NP_376436.1| - 3.6e-09 37.0 0.0 0.0041 17.5 0.0 3.2 2 0 0 2 2 2 2 RNA helicase IstB_IS21 PF01695.17 gi|15920767|ref|NP_376436.1| - 1.7e-08 34.4 0.0 0.0061 16.3 0.0 2.7 2 1 0 2 2 2 2 IstB-like ATP binding protein AAA_33 PF13671.6 gi|15920767|ref|NP_376436.1| - 1.2e-07 31.9 0.0 0.016 15.4 0.0 2.5 2 0 0 2 2 2 2 AAA domain TIP49 PF06068.13 gi|15920767|ref|NP_376436.1| - 1.8e-07 30.7 0.0 0.0016 17.7 0.0 2.5 2 0 0 2 2 2 2 TIP49 P-loop domain Rad17 PF03215.15 gi|15920767|ref|NP_376436.1| - 2.2e-07 31.0 0.0 0.013 15.4 0.0 3.0 2 1 0 2 2 2 2 Rad17 P-loop domain AAA_17 PF13207.6 gi|15920767|ref|NP_376436.1| - 3.2e-07 30.8 1.7 0.017 15.5 0.0 3.5 4 1 0 4 4 2 2 AAA domain NACHT PF05729.12 gi|15920767|ref|NP_376436.1| - 3.4e-07 30.3 0.2 0.11 12.4 0.1 3.7 2 2 2 4 4 4 1 NACHT domain AAA_28 PF13521.6 gi|15920767|ref|NP_376436.1| - 4.1e-07 30.4 0.0 0.012 15.9 0.0 2.6 2 0 0 2 2 2 2 AAA domain AAA_25 PF13481.6 gi|15920767|ref|NP_376436.1| - 7.4e-07 28.9 0.6 0.24 11.0 0.1 3.4 2 1 1 3 3 3 2 AAA domain AAA_24 PF13479.6 gi|15920767|ref|NP_376436.1| - 2.1e-06 27.6 0.0 0.01 15.6 0.0 3.5 3 0 0 3 3 3 1 AAA domain TsaE PF02367.17 gi|15920767|ref|NP_376436.1| - 3.1e-06 27.2 0.0 0.0068 16.4 0.0 2.5 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE Mg_chelatase PF01078.21 gi|15920767|ref|NP_376436.1| - 3.6e-06 26.5 3.2 0.0058 16.0 0.4 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI DUF815 PF05673.13 gi|15920767|ref|NP_376436.1| - 5e-06 25.9 0.0 0.039 13.1 0.0 2.6 2 0 0 2 2 2 2 Protein of unknown function (DUF815) AAA_7 PF12775.7 gi|15920767|ref|NP_376436.1| - 1.4e-05 24.7 0.0 0.21 11.1 0.0 2.5 2 0 0 2 2 2 2 P-loop containing dynein motor region AAA_3 PF07726.11 gi|15920767|ref|NP_376436.1| - 3e-05 23.9 0.0 0.05 13.5 0.1 2.9 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) MCM PF00493.23 gi|15920767|ref|NP_376436.1| - 6.1e-05 22.2 0.1 0.051 12.7 0.1 2.5 2 0 0 2 2 2 1 MCM P-loop domain ABC_tran PF00005.27 gi|15920767|ref|NP_376436.1| - 6.4e-05 23.5 0.1 0.27 11.8 0.0 3.3 2 1 0 2 2 2 1 ABC transporter TniB PF05621.11 gi|15920767|ref|NP_376436.1| - 0.00011 21.7 0.2 0.73 9.2 0.0 3.6 3 0 0 3 3 3 1 Bacterial TniB protein ATPase_2 PF01637.18 gi|15920767|ref|NP_376436.1| - 0.00013 21.9 5.4 0.1 12.5 0.0 4.6 4 2 0 4 4 3 1 ATPase domain predominantly from Archaea Sigma54_activat PF00158.26 gi|15920767|ref|NP_376436.1| - 0.0002 21.1 0.0 0.79 9.4 0.0 3.2 3 1 0 3 3 3 2 Sigma-54 interaction domain ATPase PF06745.13 gi|15920767|ref|NP_376436.1| - 0.00028 20.3 0.5 1.1 8.6 0.3 3.5 2 1 0 2 2 2 1 KaiC Glutaredoxin PF00462.24 gi|15920767|ref|NP_376436.1| - 0.00036 20.7 0.0 0.0032 17.7 0.0 2.6 3 0 0 3 3 1 1 Glutaredoxin MMR_HSR1 PF01926.23 gi|15920767|ref|NP_376436.1| - 0.0013 18.8 0.1 0.84 9.7 0.0 3.8 3 1 0 3 3 3 1 50S ribosome-binding GTPase Bac_DnaA PF00308.18 gi|15920767|ref|NP_376436.1| - 0.0018 18.2 0.0 0.54 10.1 0.0 2.5 2 0 0 2 2 2 1 Bacterial dnaA protein Viral_helicase1 PF01443.18 gi|15920767|ref|NP_376436.1| - 0.0024 17.7 0.0 0.16 11.7 0.0 2.4 2 0 0 2 2 2 1 Viral (Superfamily 1) RNA helicase AAA_30 PF13604.6 gi|15920767|ref|NP_376436.1| - 0.0026 17.5 0.0 2.9 7.5 0.0 2.7 3 0 0 3 3 2 1 AAA domain Sigma54_activ_2 PF14532.6 gi|15920767|ref|NP_376436.1| - 0.0034 17.5 0.0 4.6 7.4 0.0 2.6 2 0 0 2 2 2 0 Sigma-54 interaction domain Zeta_toxin PF06414.12 gi|15920767|ref|NP_376436.1| - 0.0035 16.6 0.1 0.32 10.2 0.0 2.7 2 0 0 2 2 2 1 Zeta toxin Parvo_NS1 PF01057.17 gi|15920767|ref|NP_376436.1| - 0.0051 15.9 0.0 0.33 10.0 0.0 2.3 2 0 0 2 2 2 1 Parvovirus non-structural protein NS1 Cytidylate_kin PF02224.18 gi|15920767|ref|NP_376436.1| - 0.0056 16.4 0.0 2 8.1 0.0 2.7 2 0 0 2 2 2 1 Cytidylate kinase Guanylate_kin PF00625.21 gi|15920767|ref|NP_376436.1| - 0.0065 16.2 2.1 6.2 6.5 0.0 3.7 3 1 1 4 4 4 0 Guanylate kinase AFG1_ATPase PF03969.16 gi|15920767|ref|NP_376436.1| - 0.0078 15.1 0.3 1.4 7.7 0.0 2.6 3 0 0 3 3 3 1 AFG1-like ATPase PPV_E1_C PF00519.17 gi|15920767|ref|NP_376436.1| - 0.0092 14.9 0.1 2.2 7.0 0.0 2.2 2 0 0 2 2 2 1 Papillomavirus helicase NB-ARC PF00931.22 gi|15920767|ref|NP_376436.1| - 0.0094 15.2 0.0 4.7 6.3 0.0 3.3 3 0 0 3 3 3 0 NB-ARC domain AAA_29 PF13555.6 gi|15920767|ref|NP_376436.1| - 0.013 15.2 0.0 4.8 7.0 0.0 2.4 2 0 0 2 2 2 0 P-loop containing region of AAA domain AAA_6 PF12774.7 gi|15920767|ref|NP_376436.1| - 0.014 14.4 0.1 1 8.2 0.0 3.0 3 0 0 3 3 3 0 Hydrolytic ATP binding site of dynein motor region ResIII PF04851.15 gi|15920767|ref|NP_376436.1| - 0.022 14.8 0.1 5.4 7.0 0.0 3.2 2 1 1 3 3 3 0 Type III restriction enzyme, res subunit Adeno_IVa2 PF02456.15 gi|15920767|ref|NP_376436.1| - 0.023 13.5 0.2 0.33 9.7 0.0 2.4 3 0 0 3 3 3 0 Adenovirus IVa2 protein AAA_11 PF13086.6 gi|15920767|ref|NP_376436.1| - 0.028 14.2 0.2 8.1 6.1 0.0 2.7 3 0 0 3 3 2 0 AAA domain SKI PF01202.22 gi|15920767|ref|NP_376436.1| - 0.033 14.3 0.2 6.6 6.8 0.1 2.8 2 0 0 2 2 2 0 Shikimate kinase KTI12 PF08433.10 gi|15920767|ref|NP_376436.1| - 0.034 13.6 0.1 4.1 6.8 0.0 3.2 3 0 0 3 3 3 0 Chromatin associated protein KTI12 RsgA_GTPase PF03193.16 gi|15920767|ref|NP_376436.1| - 0.041 13.8 0.0 9.3 6.1 0.0 2.9 2 0 0 2 2 2 0 RsgA GTPase SMC_N PF02463.19 gi|15920767|ref|NP_376436.1| - 0.048 13.1 0.0 25 4.2 0.0 3.6 2 2 1 3 3 3 0 RecF/RecN/SMC N terminal domain Cytidylate_kin2 PF13189.6 gi|15920767|ref|NP_376436.1| - 0.057 13.6 0.0 11 6.1 0.0 2.7 2 0 0 2 2 2 0 Cytidylate kinase-like family DAP3 PF10236.9 gi|15920767|ref|NP_376436.1| - 0.067 12.3 0.0 8 5.5 0.0 2.4 2 0 0 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 AAA_19 PF13245.6 gi|15920767|ref|NP_376436.1| - 0.069 13.5 0.0 13 6.1 0.0 2.7 2 0 0 2 2 2 0 AAA domain PhoH PF02562.16 gi|15920767|ref|NP_376436.1| - 0.073 12.5 0.2 4.9 6.6 0.0 2.9 3 0 0 3 3 2 0 PhoH-like protein Ploopntkinase3 PF18751.1 gi|15920767|ref|NP_376436.1| - 0.078 12.9 0.1 4.3 7.2 0.0 2.4 2 0 0 2 2 2 0 P-loop Nucleotide Kinase3 IPT PF01745.16 gi|15920767|ref|NP_376436.1| - 0.087 12.2 0.0 1.3 8.3 0.0 2.8 3 0 0 3 3 3 0 Isopentenyl transferase Amino_oxidase PF01593.24 gi|15920768|ref|NP_376437.1| - 8.4e-13 48.4 0.0 6e-11 42.3 0.0 2.3 2 1 0 2 2 2 1 Flavin containing amine oxidoreductase DAO PF01266.24 gi|15920768|ref|NP_376437.1| - 1.7e-12 47.6 0.9 8.8e-07 28.8 0.8 2.8 2 1 0 2 2 2 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|15920768|ref|NP_376437.1| - 1.4e-11 44.5 0.1 3.2e-11 43.3 0.1 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 gi|15920768|ref|NP_376437.1| - 3.2e-10 39.7 0.4 3.5e-06 26.4 1.6 3.0 3 0 0 3 3 3 2 FAD binding domain Thi4 PF01946.17 gi|15920768|ref|NP_376437.1| - 5e-09 35.7 0.3 6.6e-08 32.1 0.3 2.1 2 0 0 2 2 2 1 Thi4 family FAD_oxidored PF12831.7 gi|15920768|ref|NP_376437.1| - 6.7e-08 32.3 0.1 2.7e-07 30.3 0.0 1.8 2 0 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|15920768|ref|NP_376437.1| - 1.1e-07 31.4 0.1 1.4e-06 27.8 0.0 2.4 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase GDI PF00996.18 gi|15920768|ref|NP_376437.1| - 5.7e-07 28.4 0.7 0.0036 15.9 0.0 2.4 3 0 0 3 3 3 2 GDP dissociation inhibitor HI0933_like PF03486.14 gi|15920768|ref|NP_376437.1| - 2.5e-06 26.5 1.2 0.00015 20.6 0.5 2.2 2 0 0 2 2 2 1 HI0933-like protein GIDA PF01134.22 gi|15920768|ref|NP_376437.1| - 1.1e-05 24.7 5.1 0.00025 20.3 0.6 2.6 3 0 0 3 3 3 2 Glucose inhibited division protein A Pyr_redox PF00070.27 gi|15920768|ref|NP_376437.1| - 8.6e-05 23.0 7.2 0.00029 21.3 1.0 2.8 3 0 0 3 3 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|15920768|ref|NP_376437.1| - 0.00022 20.6 0.3 0.00035 19.9 0.3 1.2 1 0 0 1 1 1 1 FAD binding domain Trp_halogenase PF04820.14 gi|15920768|ref|NP_376437.1| - 0.0063 15.4 2.5 0.018 13.9 0.5 2.4 2 1 2 4 4 4 1 Tryptophan halogenase Pyr_redox_3 PF13738.6 gi|15920768|ref|NP_376437.1| - 0.037 13.3 0.6 0.21 10.8 0.1 2.1 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 gi|15920768|ref|NP_376437.1| - 0.072 12.1 0.6 0.22 10.5 0.4 1.9 2 0 0 2 2 2 0 Lycopene cyclase protein YjeF_N PF03853.15 gi|15920768|ref|NP_376437.1| - 0.073 13.0 0.2 1 9.2 0.1 2.5 3 0 0 3 3 3 0 YjeF-related protein N-terminus NAD_binding_9 PF13454.6 gi|15920768|ref|NP_376437.1| - 0.17 11.9 0.0 0.28 11.1 0.0 1.4 1 0 0 1 1 1 0 FAD-NAD(P)-binding Phosphodiest PF01663.22 gi|15920769|ref|NP_376438.1| - 7.7e-15 55.3 3.2 3.1e-14 53.3 3.2 2.0 1 1 0 1 1 1 1 Type I phosphodiesterase / nucleotide pyrophosphatase PglZ PF08665.12 gi|15920769|ref|NP_376438.1| - 2.3e-06 27.8 0.1 5.7e-05 23.3 0.0 2.2 2 0 0 2 2 2 1 PglZ domain Metalloenzyme PF01676.18 gi|15920769|ref|NP_376438.1| - 6.6e-06 25.7 0.2 2.8e-05 23.6 0.1 1.9 2 0 0 2 2 2 1 Metalloenzyme superfamily Pribosyltran PF00156.27 gi|15920770|ref|NP_376439.1| - 1.4e-23 83.2 0.3 1.7e-23 82.9 0.3 1.1 1 0 0 1 1 1 1 Phosphoribosyl transferase domain MM_CoA_mutase PF01642.22 gi|15920771|ref|NP_376440.1| - 5.2e-220 731.3 0.0 5.9e-220 731.2 0.0 1.0 1 0 0 1 1 1 1 Methylmalonyl-CoA mutase Glyoxalase_4 PF13669.6 gi|15920772|ref|NP_376441.1| - 8.4e-25 87.2 0.0 1.1e-24 86.7 0.0 1.2 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase PF00903.25 gi|15920772|ref|NP_376441.1| - 3.3e-14 53.2 0.0 3.6e-14 53.1 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_3 PF13468.6 gi|15920772|ref|NP_376441.1| - 7.7e-11 42.4 0.0 9.5e-11 42.1 0.0 1.1 1 0 0 1 1 1 1 Glyoxalase-like domain Glyoxalase_2 PF12681.7 gi|15920772|ref|NP_376441.1| - 8.4e-05 22.5 0.0 0.00011 22.1 0.0 1.2 1 0 0 1 1 1 1 Glyoxalase-like domain CheD PF03975.13 gi|15920772|ref|NP_376441.1| - 0.019 15.1 0.1 2.2 8.4 0.1 2.2 2 0 0 2 2 2 0 CheD chemotactic sensory transduction Glyoxalase_6 PF18029.1 gi|15920772|ref|NP_376441.1| - 0.027 15.3 0.0 0.037 14.8 0.0 1.2 1 0 0 1 1 1 0 Glyoxalase-like domain CppA_N PF14506.6 gi|15920772|ref|NP_376441.1| - 0.046 13.8 0.1 0.065 13.3 0.1 1.5 1 1 0 1 1 1 0 CppA N-terminal DUF1338 PF07063.13 gi|15920772|ref|NP_376441.1| - 0.09 11.9 0.1 0.99 8.5 0.0 1.9 1 1 0 2 2 2 0 Domain of unknown function (DUF1338) Glyoxalase_5 PF14696.6 gi|15920772|ref|NP_376441.1| - 0.098 12.8 0.0 0.15 12.2 0.0 1.4 1 1 0 1 1 1 0 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal Exotox-A_bind PF09101.10 gi|15920772|ref|NP_376441.1| - 0.12 11.7 0.0 0.14 11.5 0.0 1.1 1 0 0 1 1 1 0 Exotoxin A binding Osmo_CC PF08946.10 gi|15920772|ref|NP_376441.1| - 0.24 11.7 4.2 1.6 9.0 0.3 2.4 2 0 0 2 2 2 0 Osmosensory transporter coiled coil ArsA_HSP20 PF17886.1 gi|15920773|ref|NP_376442.1| - 2.6e-13 49.3 0.1 3.8e-13 48.8 0.1 1.3 1 0 0 1 1 1 1 HSP20-like domain found in ArsA HSP20 PF00011.21 gi|15920773|ref|NP_376442.1| - 8.2e-13 48.4 3.5 1.5e-11 44.3 3.5 2.2 1 1 0 1 1 1 1 Hsp20/alpha crystallin family CS PF04969.16 gi|15920773|ref|NP_376442.1| - 0.00011 23.2 1.9 0.00019 22.3 1.9 1.4 1 0 0 1 1 1 1 CS domain PIH1_CS PF18201.1 gi|15920773|ref|NP_376442.1| - 0.0012 19.2 0.1 0.0017 18.7 0.1 1.2 1 0 0 1 1 1 1 PIH1 CS-like domain zf-ZPR1 PF03367.13 gi|15920774|ref|NP_376443.1| - 4.9e-31 107.7 0.4 7.5e-31 107.1 0.4 1.3 1 0 0 1 1 1 1 ZPR1 zinc-finger domain Zn_Tnp_IS1595 PF12760.7 gi|15920774|ref|NP_376443.1| - 0.047 13.7 0.1 0.047 13.7 0.1 1.9 2 1 0 2 2 2 0 Transposase zinc-ribbon domain Sec63 PF02889.16 gi|15920774|ref|NP_376443.1| - 0.075 12.2 0.0 0.075 12.2 0.0 1.1 1 0 0 1 1 1 0 Sec63 Brl domain DUF5318 PF17249.2 gi|15920774|ref|NP_376443.1| - 0.18 11.5 0.3 0.28 10.9 0.3 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5318) VATC PF18716.1 gi|15920774|ref|NP_376443.1| - 0.4 10.6 3.1 0.96 9.3 0.1 2.6 3 0 0 3 3 3 0 Vms1-associating treble clef domain Rubredoxin_2 PF18073.1 gi|15920774|ref|NP_376443.1| - 0.93 9.3 4.0 1.8 8.4 0.2 2.4 2 0 0 2 2 2 0 Rubredoxin metal binding domain GTP_EFTU PF00009.27 gi|15920775|ref|NP_376444.1| - 2.1e-22 79.6 0.0 4.6e-22 78.5 0.0 1.5 1 0 0 1 1 1 1 Elongation factor Tu GTP binding domain GTP_EFTU_D3 PF03143.17 gi|15920775|ref|NP_376444.1| - 7.1e-08 32.7 1.2 2.2e-07 31.1 1.2 1.9 1 1 0 1 1 1 1 Elongation factor Tu C-terminal domain GTP_EFTU_D2 PF03144.25 gi|15920775|ref|NP_376444.1| - 1.7e-06 28.3 0.4 5.9e-06 26.6 0.4 2.0 1 0 0 1 1 1 1 Elongation factor Tu domain 2 MMR_HSR1 PF01926.23 gi|15920775|ref|NP_376444.1| - 6.8e-06 26.2 0.0 2.4e-05 24.4 0.0 2.0 1 1 0 1 1 1 1 50S ribosome-binding GTPase PduV-EutP PF10662.9 gi|15920775|ref|NP_376444.1| - 0.0015 18.3 0.7 14 5.4 0.1 3.6 2 1 1 3 3 3 3 Ethanolamine utilisation - propanediol utilisation RsgA_GTPase PF03193.16 gi|15920775|ref|NP_376444.1| - 0.0035 17.3 3.1 0.42 10.5 0.1 2.7 3 0 0 3 3 3 2 RsgA GTPase AlbA_2 PF04326.14 gi|15920775|ref|NP_376444.1| - 0.0088 16.4 5.6 0.091 13.1 1.1 3.0 3 1 0 3 3 3 1 Putative DNA-binding domain MTHFR PF02219.17 gi|15920775|ref|NP_376444.1| - 0.084 12.2 0.1 0.15 11.3 0.1 1.3 1 0 0 1 1 1 0 Methylenetetrahydrofolate reductase COXG PF06240.13 gi|15920776|ref|NP_376445.1| - 1.1e-07 31.7 0.1 1.4e-07 31.4 0.1 1.2 1 0 0 1 1 1 1 Carbon monoxide dehydrogenase subunit G (CoxG) P2 PF07194.11 gi|15920776|ref|NP_376445.1| - 0.058 13.5 0.0 0.21 11.7 0.0 1.9 1 1 1 2 2 2 0 P2 response regulator binding domain COXG PF06240.13 gi|15920777|ref|NP_376446.1| - 1.9e-49 167.0 0.2 2.1e-49 166.8 0.2 1.0 1 0 0 1 1 1 1 Carbon monoxide dehydrogenase subunit G (CoxG) Polyketide_cyc2 PF10604.9 gi|15920777|ref|NP_376446.1| - 0.00071 19.9 0.0 0.00081 19.7 0.0 1.1 1 0 0 1 1 1 1 Polyketide cyclase / dehydrase and lipid transport Polyketide_cyc PF03364.20 gi|15920777|ref|NP_376446.1| - 0.19 11.9 0.0 0.55 10.4 0.0 1.7 1 1 0 1 1 1 0 Polyketide cyclase / dehydrase and lipid transport NTP_transf_3 PF12804.7 gi|15920778|ref|NP_376447.1| - 1.3e-31 110.1 0.0 1.7e-31 109.7 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain CTP_transf_3 PF02348.19 gi|15920778|ref|NP_376447.1| - 0.00011 22.2 0.1 0.00022 21.2 0.1 1.4 1 1 0 1 1 1 1 Cytidylyltransferase IspD PF01128.19 gi|15920778|ref|NP_376447.1| - 0.00017 21.4 0.0 0.00032 20.5 0.0 1.4 1 1 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CofC PF01983.16 gi|15920778|ref|NP_376447.1| - 0.001 18.3 0.5 0.0015 17.7 0.5 1.3 1 1 0 1 1 1 1 Guanylyl transferase CofC like Fer2_2 PF01799.20 gi|15920779|ref|NP_376448.1| - 7.2e-35 118.9 2.3 1.3e-34 118.0 0.0 2.0 2 0 0 2 2 2 1 [2Fe-2S] binding domain Fer2 PF00111.27 gi|15920779|ref|NP_376448.1| - 1.6e-07 31.1 0.8 1.6e-07 31.1 0.8 1.9 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Fer2_3 PF13085.6 gi|15920779|ref|NP_376448.1| - 0.00028 20.9 1.2 0.00058 19.8 1.2 1.7 1 1 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2_4 PF13510.6 gi|15920779|ref|NP_376448.1| - 0.58 10.3 3.1 5.5 7.1 2.0 2.5 2 1 0 2 2 2 0 2Fe-2S iron-sulfur cluster binding domain FAD_binding_5 PF00941.21 gi|15920780|ref|NP_376449.1| - 3.1e-48 163.7 0.0 4.4e-48 163.3 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain in molybdopterin dehydrogenase CO_deh_flav_C PF03450.17 gi|15920780|ref|NP_376449.1| - 2.8e-27 94.9 0.3 4.3e-27 94.3 0.3 1.3 1 0 0 1 1 1 1 CO dehydrogenase flavoprotein C-terminal domain Diphthami_syn_2 PF01902.17 gi|15920780|ref|NP_376449.1| - 0.051 13.1 0.0 0.076 12.5 0.0 1.2 1 0 0 1 1 1 0 Diphthamide synthase TP_methylase PF00590.20 gi|15920781|ref|NP_376450.1| - 1e-43 149.8 0.1 1.2e-43 149.5 0.1 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases AIDA PF16168.5 gi|15920781|ref|NP_376450.1| - 0.11 12.6 0.0 0.3 11.2 0.0 1.7 1 0 0 1 1 1 0 Adhesin of bacterial autotransporter system, probable stalk DUF1404 PF07185.11 gi|15920782|ref|NP_376451.1| - 4.1e-05 23.4 7.3 4.1e-05 23.4 7.3 2.0 2 1 0 2 2 2 1 Protein of unknown function (DUF1404) MttA_Hcf106 PF02416.16 gi|15920782|ref|NP_376451.1| - 0.41 10.0 3.2 0.48 9.8 0.3 2.3 2 0 0 2 2 2 0 mttA/Hcf106 family DUF2070 PF09843.9 gi|15920782|ref|NP_376451.1| - 3.6 5.8 17.1 4.3 5.5 17.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) SIS PF01380.22 gi|15920783|ref|NP_376452.1| - 4.6e-14 52.4 0.2 3.9e-08 33.2 0.0 3.1 3 0 0 3 3 3 2 SIS domain Glyco_transf_4 PF13439.6 gi|15920783|ref|NP_376452.1| - 0.0043 17.1 0.0 0.0066 16.5 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase Family 4 SIS_2 PF13580.6 gi|15920783|ref|NP_376452.1| - 0.02 14.9 0.2 0.036 14.1 0.2 1.4 1 0 0 1 1 1 0 SIS domain Amidohydro_1 PF01979.20 gi|15920784|ref|NP_376453.1| - 2e-09 37.3 0.0 7.4e-05 22.2 0.0 2.1 2 0 0 2 2 2 2 Amidohydrolase family Amidohydro_3 PF07969.11 gi|15920784|ref|NP_376453.1| - 0.012 15.1 0.0 0.025 14.1 0.0 1.4 2 0 0 2 2 2 0 Amidohydrolase family Met_10 PF02475.16 gi|15920785|ref|NP_376454.1| - 1.5e-44 152.2 0.0 1.9e-44 151.8 0.0 1.1 1 0 0 1 1 1 1 Met-10+ like-protein Gln-synt_C PF00120.24 gi|15920786|ref|NP_376455.1| - 1.4e-74 251.2 0.0 3.9e-74 249.7 0.0 1.6 1 1 0 1 1 1 1 Glutamine synthetase, catalytic domain Gln-synt_N_2 PF16952.5 gi|15920786|ref|NP_376455.1| - 1.5e-08 34.4 0.0 2.7e-08 33.6 0.0 1.4 1 0 0 1 1 1 1 Glutamine synthetase N-terminal domain Gln-synt_N PF03951.19 gi|15920786|ref|NP_376455.1| - 0.019 14.7 0.0 0.48 10.2 0.0 2.6 1 1 0 1 1 1 0 Glutamine synthetase, beta-Grasp domain ADH_N PF08240.12 gi|15920787|ref|NP_376456.1| - 4.1e-31 107.1 2.0 4.1e-31 107.1 2.0 1.7 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|15920787|ref|NP_376456.1| - 1.2e-22 80.3 0.0 3.9e-22 78.6 0.0 1.8 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|15920787|ref|NP_376456.1| - 1.3e-09 39.3 0.0 2e-09 38.6 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 gi|15920787|ref|NP_376456.1| - 9.8e-08 31.5 0.1 1.7e-07 30.8 0.1 1.3 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain TrkA_N PF02254.18 gi|15920787|ref|NP_376456.1| - 0.00014 22.0 0.0 0.00031 21.0 0.0 1.6 1 0 0 1 1 1 1 TrkA-N domain NAD_binding_7 PF13241.6 gi|15920787|ref|NP_376456.1| - 0.00084 19.7 0.0 0.0014 19.0 0.0 1.3 1 0 0 1 1 1 1 Putative NAD(P)-binding Pyr_redox PF00070.27 gi|15920787|ref|NP_376456.1| - 0.0015 19.1 0.1 0.0031 18.0 0.1 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Shikimate_DH PF01488.20 gi|15920787|ref|NP_376456.1| - 0.0015 18.6 0.0 0.0027 17.8 0.0 1.4 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase Glu_dehyd_C PF16912.5 gi|15920787|ref|NP_376456.1| - 0.0067 15.9 0.0 0.01 15.3 0.0 1.2 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus 2-Hacid_dh_C PF02826.19 gi|15920787|ref|NP_376456.1| - 0.007 15.7 0.0 0.012 15.0 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Pyr_redox_2 PF07992.14 gi|15920787|ref|NP_376456.1| - 0.053 12.7 0.1 0.078 12.2 0.1 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.16 gi|15920787|ref|NP_376456.1| - 0.08 12.6 0.0 0.12 12.0 0.0 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA DUF364 PF04016.12 gi|15920787|ref|NP_376456.1| - 0.09 12.4 0.0 0.16 11.5 0.0 1.4 1 0 0 1 1 1 0 Putative heavy-metal chelation Staph_opine_DH PF10100.9 gi|15920787|ref|NP_376456.1| - 0.18 10.4 0.0 0.24 10.0 0.0 1.1 1 0 0 1 1 1 0 Staphylopine dehydrogenase RTC PF01137.21 gi|15920788|ref|NP_376457.1| - 1e-76 257.0 0.1 1.2e-76 256.8 0.1 1.0 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase RTC_insert PF05189.13 gi|15920788|ref|NP_376457.1| - 4.7e-21 75.2 0.2 7.9e-21 74.5 0.2 1.4 1 0 0 1 1 1 1 RNA 3'-terminal phosphate cyclase (RTC), insert domain IMS PF00817.20 gi|15920791|ref|NP_376460.1| - 1.8e-45 154.6 1.5 5.9e-45 152.9 0.4 2.0 2 0 0 2 2 2 1 impB/mucB/samB family IMS_HHH PF11798.8 gi|15920791|ref|NP_376460.1| - 5.4e-07 29.6 0.0 1.2e-06 28.4 0.0 1.7 1 0 0 1 1 1 1 IMS family HHH motif DUF1805 PF08827.11 gi|15920791|ref|NP_376460.1| - 0.013 15.8 0.3 0.072 13.4 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF1805) IMS_C PF11799.8 gi|15920791|ref|NP_376460.1| - 0.048 14.4 0.2 0.2 12.3 0.1 2.0 2 1 0 2 2 2 0 impB/mucB/samB family C-terminal domain Cdd1 PF11731.8 gi|15920791|ref|NP_376460.1| - 0.12 12.7 0.0 0.27 11.5 0.0 1.6 1 0 0 1 1 1 0 Pathogenicity locus BAF PF02961.14 gi|15920791|ref|NP_376460.1| - 0.14 12.6 0.0 0.46 10.9 0.0 1.9 1 0 0 1 1 1 0 Barrier to autointegration factor DUF4665 PF15679.5 gi|15920791|ref|NP_376460.1| - 1.3 9.7 4.6 2.2 8.9 0.4 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4665) PfkB PF00294.24 gi|15920792|ref|NP_376461.1| - 3.2e-36 125.2 0.0 5.7e-18 65.3 0.0 2.0 2 0 0 2 2 2 2 pfkB family carbohydrate kinase TIP49 PF06068.13 gi|15920793|ref|NP_376462.1| - 4.4e-140 466.9 2.9 5.7e-140 466.5 2.9 1.1 1 0 0 1 1 1 1 TIP49 P-loop domain TIP49_C PF17856.1 gi|15920793|ref|NP_376462.1| - 9.2e-22 77.0 0.6 1.1e-20 73.6 0.3 2.7 3 0 0 3 3 2 1 TIP49 AAA-lid domain AAA PF00004.29 gi|15920793|ref|NP_376462.1| - 7.7e-12 45.8 1.7 1.3e-08 35.3 0.1 2.7 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|15920793|ref|NP_376462.1| - 2e-09 37.4 1.5 8.2e-08 32.1 0.1 2.7 3 0 0 3 3 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_16 PF13191.6 gi|15920793|ref|NP_376462.1| - 2.3e-07 31.4 0.3 1.9e-06 28.4 0.3 2.1 1 1 0 1 1 1 1 AAA ATPase domain AAA_22 PF13401.6 gi|15920793|ref|NP_376462.1| - 7.1e-07 29.6 1.2 0.036 14.3 0.0 2.7 3 0 0 3 3 2 2 AAA domain AAA_7 PF12775.7 gi|15920793|ref|NP_376462.1| - 1.2e-05 24.9 0.2 0.00061 19.4 0.1 2.2 2 0 0 2 2 2 1 P-loop containing dynein motor region AAA_5 PF07728.14 gi|15920793|ref|NP_376462.1| - 2.2e-05 24.5 0.2 0.0005 20.1 0.0 2.6 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) Mg_chelatase PF01078.21 gi|15920793|ref|NP_376462.1| - 0.00011 21.6 0.6 0.0007 19.0 0.1 2.1 2 0 0 2 2 2 1 Magnesium chelatase, subunit ChlI IstB_IS21 PF01695.17 gi|15920793|ref|NP_376462.1| - 0.001 18.9 0.1 0.0019 18.0 0.1 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_2 PF07724.14 gi|15920793|ref|NP_376462.1| - 0.0013 18.9 0.0 0.0045 17.1 0.0 1.9 1 0 0 1 1 1 1 AAA domain (Cdc48 subfamily) Sigma54_activat PF00158.26 gi|15920793|ref|NP_376462.1| - 0.0014 18.3 0.3 0.012 15.4 0.1 2.3 2 0 0 2 2 2 1 Sigma-54 interaction domain AAA_33 PF13671.6 gi|15920793|ref|NP_376462.1| - 0.0016 18.6 0.0 0.0032 17.6 0.0 1.6 1 0 0 1 1 1 1 AAA domain DnaB_C PF03796.15 gi|15920793|ref|NP_376462.1| - 0.0045 16.4 0.0 0.0099 15.2 0.0 1.6 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain AAA_25 PF13481.6 gi|15920793|ref|NP_376462.1| - 0.0062 16.1 0.4 0.013 15.1 0.3 1.7 2 1 0 2 2 1 1 AAA domain AAA_18 PF13238.6 gi|15920793|ref|NP_376462.1| - 0.0064 17.0 0.0 0.019 15.5 0.0 2.0 1 1 0 1 1 1 1 AAA domain AAA_19 PF13245.6 gi|15920793|ref|NP_376462.1| - 0.0072 16.7 2.3 0.39 11.1 0.2 2.6 2 1 0 2 2 2 1 AAA domain Parvo_NS1 PF01057.17 gi|15920793|ref|NP_376462.1| - 0.012 14.7 0.0 0.019 14.0 0.0 1.3 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 PhoH PF02562.16 gi|15920793|ref|NP_376462.1| - 0.014 14.9 0.4 0.029 13.8 0.4 1.5 1 0 0 1 1 1 0 PhoH-like protein AAA_28 PF13521.6 gi|15920793|ref|NP_376462.1| - 0.015 15.6 0.2 0.05 13.8 0.1 2.0 2 0 0 2 2 1 0 AAA domain AAA_17 PF13207.6 gi|15920793|ref|NP_376462.1| - 0.017 15.6 0.0 0.056 13.9 0.0 1.9 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|15920793|ref|NP_376462.1| - 0.018 15.4 0.0 0.034 14.5 0.0 1.4 1 0 0 1 1 1 0 RNA helicase DUF2075 PF09848.9 gi|15920793|ref|NP_376462.1| - 0.022 14.0 0.1 0.033 13.4 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) NACHT PF05729.12 gi|15920793|ref|NP_376462.1| - 0.028 14.3 0.0 0.054 13.4 0.0 1.5 1 0 0 1 1 1 0 NACHT domain ResIII PF04851.15 gi|15920793|ref|NP_376462.1| - 0.03 14.3 0.6 0.55 10.2 0.2 2.3 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit AAA_11 PF13086.6 gi|15920793|ref|NP_376462.1| - 0.03 14.1 0.1 0.08 12.7 0.1 1.7 1 1 0 1 1 1 0 AAA domain ABC_tran PF00005.27 gi|15920793|ref|NP_376462.1| - 0.036 14.6 0.1 0.078 13.5 0.1 1.6 1 0 0 1 1 1 0 ABC transporter TsaE PF02367.17 gi|15920793|ref|NP_376462.1| - 0.051 13.6 0.3 0.2 11.7 0.1 2.0 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE Rad17 PF03215.15 gi|15920793|ref|NP_376462.1| - 0.054 13.4 0.1 0.14 12.1 0.0 1.7 2 0 0 2 2 1 0 Rad17 P-loop domain DUF815 PF05673.13 gi|15920793|ref|NP_376462.1| - 0.058 12.6 0.1 0.1 11.7 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF815) ATPase PF06745.13 gi|15920793|ref|NP_376462.1| - 0.058 12.7 1.9 0.35 10.2 0.1 2.3 2 0 0 2 2 2 0 KaiC TFIID-31kDa PF02291.15 gi|15920793|ref|NP_376462.1| - 0.061 13.4 1.4 7 6.8 0.1 2.6 3 1 0 3 3 2 0 Transcription initiation factor IID, 31kD subunit AAA_30 PF13604.6 gi|15920793|ref|NP_376462.1| - 0.076 12.7 0.8 0.8 9.4 0.2 2.4 2 0 0 2 2 2 0 AAA domain UN_NPL4 PF11543.8 gi|15920793|ref|NP_376462.1| - 0.079 13.5 0.3 7.3 7.2 0.1 2.8 2 0 0 2 2 2 0 Nuclear pore localisation protein NPL4 DNA_pol3_delta2 PF13177.6 gi|15920793|ref|NP_376462.1| - 0.081 12.7 0.0 0.66 9.7 0.0 2.5 2 1 0 2 2 1 0 DNA polymerase III, delta subunit Nebulin PF00880.18 gi|15920793|ref|NP_376462.1| - 0.14 12.1 0.1 0.29 11.1 0.1 1.5 1 0 0 1 1 1 0 Nebulin repeat NUDIX PF00293.28 gi|15920794|ref|NP_376463.1| - 2.9e-14 53.3 0.0 3.8e-14 52.8 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 gi|15920794|ref|NP_376463.1| - 0.023 14.7 0.0 0.027 14.4 0.0 1.3 1 1 0 1 1 1 0 NUDIX domain GATase PF00117.28 gi|15920795|ref|NP_376464.1| - 9.6e-35 120.1 0.0 1.1e-34 119.9 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|15920795|ref|NP_376464.1| - 6.8e-10 39.1 0.1 3.8e-09 36.6 0.1 2.2 1 1 1 2 2 2 1 Peptidase C26 SNO PF01174.19 gi|15920795|ref|NP_376464.1| - 2.3e-06 27.6 0.3 0.041 13.7 0.1 2.1 2 0 0 2 2 2 2 SNO glutamine amidotransferase family GATase_3 PF07685.14 gi|15920795|ref|NP_376464.1| - 0.00018 21.2 0.1 0.0003 20.5 0.1 1.5 1 1 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain HTS PF04204.16 gi|15920795|ref|NP_376464.1| - 0.0089 15.0 0.0 0.011 14.7 0.0 1.1 1 0 0 1 1 1 1 Homoserine O-succinyltransferase DJ-1_PfpI PF01965.24 gi|15920795|ref|NP_376464.1| - 0.062 13.1 0.0 0.092 12.5 0.0 1.3 1 0 0 1 1 1 0 DJ-1/PfpI family ATPase PF06745.13 gi|15920796|ref|NP_376465.1| - 3.2e-59 200.1 0.3 4.1e-59 199.7 0.3 1.0 1 0 0 1 1 1 1 KaiC AAA_25 PF13481.6 gi|15920796|ref|NP_376465.1| - 2e-08 34.1 0.0 2.9e-08 33.5 0.0 1.3 1 0 0 1 1 1 1 AAA domain Rad51 PF08423.11 gi|15920796|ref|NP_376465.1| - 3.1e-07 29.9 0.0 5.7e-07 29.0 0.0 1.4 1 1 0 1 1 1 1 Rad51 GvpD PF07088.11 gi|15920796|ref|NP_376465.1| - 2.2e-06 26.6 0.0 3.1e-06 26.1 0.0 1.3 1 0 0 1 1 1 1 GvpD gas vesicle protein RecA PF00154.21 gi|15920796|ref|NP_376465.1| - 3.7e-06 26.6 0.0 7.6e-06 25.6 0.0 1.5 2 0 0 2 2 2 1 recA bacterial DNA recombination protein AAA_14 PF13173.6 gi|15920796|ref|NP_376465.1| - 9.3e-06 25.7 0.1 0.00036 20.6 0.1 2.3 1 1 0 1 1 1 1 AAA domain MEDS PF14417.6 gi|15920796|ref|NP_376465.1| - 1.5e-05 24.9 0.0 2.3e-05 24.3 0.0 1.3 1 0 0 1 1 1 1 MEDS: MEthanogen/methylotroph, DcmR Sensory domain IstB_IS21 PF01695.17 gi|15920796|ref|NP_376465.1| - 2.4e-05 24.2 0.0 0.00027 20.7 0.0 2.0 1 1 1 2 2 2 1 IstB-like ATP binding protein AAA_22 PF13401.6 gi|15920796|ref|NP_376465.1| - 0.0003 21.1 0.0 0.00052 20.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|15920796|ref|NP_376465.1| - 0.00033 20.5 0.1 0.00068 19.4 0.1 1.5 1 1 0 1 1 1 1 AAA domain DnaB_C PF03796.15 gi|15920796|ref|NP_376465.1| - 0.00044 19.7 0.0 0.0013 18.1 0.0 2.0 1 1 0 1 1 1 1 DnaB-like helicase C terminal domain PAXNEB PF05625.11 gi|15920796|ref|NP_376465.1| - 0.0014 17.8 0.0 0.003 16.8 0.0 1.5 1 1 0 1 1 1 1 PAXNEB protein RNA_helicase PF00910.22 gi|15920796|ref|NP_376465.1| - 0.004 17.5 0.0 0.0094 16.3 0.0 1.6 1 0 0 1 1 1 1 RNA helicase DUF2075 PF09848.9 gi|15920796|ref|NP_376465.1| - 0.023 13.9 0.0 0.032 13.5 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) NACHT PF05729.12 gi|15920796|ref|NP_376465.1| - 0.028 14.3 0.0 0.09 12.7 0.0 2.0 1 1 0 1 1 1 0 NACHT domain NTPase_1 PF03266.15 gi|15920796|ref|NP_376465.1| - 0.033 14.1 0.2 0.073 13.0 0.1 1.7 1 1 0 1 1 1 0 NTPase ResIII PF04851.15 gi|15920796|ref|NP_376465.1| - 0.034 14.2 0.0 0.057 13.4 0.0 1.4 1 0 0 1 1 1 0 Type III restriction enzyme, res subunit AAA_19 PF13245.6 gi|15920796|ref|NP_376465.1| - 0.056 13.8 0.1 0.14 12.5 0.1 1.8 1 1 0 1 1 1 0 AAA domain AAA PF00004.29 gi|15920796|ref|NP_376465.1| - 0.086 13.3 0.2 0.35 11.3 0.2 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) MeaB PF03308.16 gi|15920796|ref|NP_376465.1| - 0.19 10.7 0.6 14 4.6 0.0 2.4 3 0 0 3 3 3 0 Methylmalonyl Co-A mutase-associated GTPase MeaB DSPc PF00782.20 gi|15920797|ref|NP_376466.1| - 1.3e-10 41.2 0.0 1.6e-10 40.9 0.0 1.2 1 0 0 1 1 1 1 Dual specificity phosphatase, catalytic domain Y_phosphatase PF00102.27 gi|15920797|ref|NP_376466.1| - 2.4e-08 33.8 0.0 3.4e-08 33.4 0.0 1.2 1 0 0 1 1 1 1 Protein-tyrosine phosphatase CDKN3 PF05706.12 gi|15920797|ref|NP_376466.1| - 2.2e-05 24.2 0.0 2.7e-05 23.9 0.0 1.1 1 0 0 1 1 1 1 Cyclin-dependent kinase inhibitor 3 (CDKN3) PTPlike_phytase PF14566.6 gi|15920797|ref|NP_376466.1| - 0.0013 18.9 0.0 0.0017 18.5 0.0 1.4 1 0 0 1 1 1 1 Inositol hexakisphosphate Y_phosphatase3 PF13350.6 gi|15920797|ref|NP_376466.1| - 0.0073 16.3 0.0 0.03 14.3 0.0 1.8 1 1 1 2 2 2 1 Tyrosine phosphatase family Phage_base_V PF04717.12 gi|15920797|ref|NP_376466.1| - 0.14 12.1 0.0 0.18 11.8 0.0 1.1 1 0 0 1 1 1 0 Type VI secretion system, phage-baseplate injector Endonuclease_5 PF04493.14 gi|15920798|ref|NP_376467.1| - 4.6e-32 111.3 0.1 6.6e-32 110.8 0.1 1.2 1 0 0 1 1 1 1 Endonuclease V Isochorismatase PF00857.20 gi|15920799|ref|NP_376468.1| - 9.6e-42 143.1 0.0 1.1e-41 142.9 0.0 1.0 1 0 0 1 1 1 1 Isochorismatase family DHHA1 PF02272.19 gi|15920800|ref|NP_376469.1| - 6.6e-09 36.3 0.1 2.2e-08 34.6 0.0 1.9 2 1 1 3 3 3 1 DHHA1 domain DHH PF01368.20 gi|15920800|ref|NP_376469.1| - 0.0031 17.7 0.0 0.0056 16.9 0.0 1.3 1 0 0 1 1 1 1 DHH family AhpC-TSA PF00578.21 gi|15920801|ref|NP_376470.1| - 3.2e-28 98.1 0.0 4.2e-28 97.7 0.0 1.2 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|15920801|ref|NP_376470.1| - 1e-12 48.0 0.0 1.4e-12 47.6 0.0 1.2 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 gi|15920801|ref|NP_376470.1| - 8.5e-10 38.3 0.3 1.8e-09 37.3 0.3 1.5 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin AhpC-TSA_2 PF13911.6 gi|15920801|ref|NP_376470.1| - 0.0026 17.9 0.0 0.0076 16.4 0.0 1.8 1 1 0 1 1 1 1 AhpC/TSA antioxidant enzyme Metallophos PF00149.28 gi|15920802|ref|NP_376471.1| - 7.6e-13 49.4 0.1 8.8e-13 49.2 0.1 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|15920802|ref|NP_376471.1| - 1.3e-11 45.0 0.0 5.7e-11 42.9 0.0 1.7 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain DUF763 PF05559.11 gi|15920803|ref|NP_376472.1| - 8.3e-127 422.7 0.0 1e-126 422.4 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF763) Citrate_synt PF00285.21 gi|15920804|ref|NP_376473.1| - 3.2e-127 424.6 0.0 3.6e-127 424.4 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain PhoU_div PF01865.16 gi|15920805|ref|NP_376474.1| - 1.4e-11 44.2 7.1 1.7e-11 43.9 7.1 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF47 DLP_helical PF18709.1 gi|15920805|ref|NP_376474.1| - 0.028 13.6 0.1 0.74 9.0 0.0 2.1 2 0 0 2 2 2 0 Dynamin-like helical domain DASH_Dad1 PF08649.10 gi|15920805|ref|NP_376474.1| - 0.041 14.1 0.2 0.28 11.4 0.1 2.3 2 0 0 2 2 2 0 DASH complex subunit Dad1 PHO4 PF01384.20 gi|15920806|ref|NP_376475.1| - 4e-27 95.2 49.5 6.8e-20 71.4 26.2 2.9 1 1 1 2 2 2 2 Phosphate transporter family RHH_1 PF01402.21 gi|15920807|ref|NP_376476.1| - 3.2e-10 39.6 0.1 4.8e-10 39.0 0.1 1.3 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family RHH_8 PF17723.1 gi|15920807|ref|NP_376476.1| - 0.021 15.0 0.1 0.025 14.8 0.1 1.4 1 1 0 1 1 1 0 Ribbon-Helix-Helix transcriptional regulator family DEAD PF00270.29 gi|15920808|ref|NP_376477.1| - 4.2e-27 95.1 0.0 4.5e-24 85.2 0.0 2.5 2 0 0 2 2 2 2 DEAD/DEAH box helicase ResIII PF04851.15 gi|15920808|ref|NP_376477.1| - 1.4e-12 48.0 0.0 3.5e-12 46.6 0.0 1.7 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 gi|15920808|ref|NP_376477.1| - 8.9e-10 38.9 0.1 1e-08 35.5 0.1 2.7 2 1 0 2 2 2 1 Helicase conserved C-terminal domain SNF2_N PF00176.23 gi|15920808|ref|NP_376477.1| - 0.00039 19.2 0.0 0.0012 17.7 0.0 1.7 2 0 0 2 2 2 1 SNF2 family N-terminal domain HHH_5 PF14520.6 gi|15920808|ref|NP_376477.1| - 0.0011 19.5 0.5 0.0063 17.1 0.1 2.6 3 0 0 3 3 3 1 Helix-hairpin-helix domain HHH PF00633.23 gi|15920808|ref|NP_376477.1| - 0.0094 15.8 0.0 0.04 13.8 0.0 2.1 1 0 0 1 1 1 1 Helix-hairpin-helix motif DNA_pol_lambd_f PF10391.9 gi|15920808|ref|NP_376477.1| - 0.068 13.0 0.0 0.31 10.9 0.0 2.1 2 0 0 2 2 2 0 Fingers domain of DNA polymerase lambda Carboxyl_trans PF01039.22 gi|15920810|ref|NP_376479.1| - 6.3e-186 618.8 1.9 7.2e-186 618.6 1.9 1.0 1 0 0 1 1 1 1 Carboxyl transferase domain MdcE PF06833.11 gi|15920810|ref|NP_376479.1| - 0.0013 18.3 1.4 0.0023 17.4 0.0 2.0 2 1 1 3 3 3 1 Malonate decarboxylase gamma subunit (MdcE) Biotin_lipoyl PF00364.22 gi|15920811|ref|NP_376480.1| - 1.1e-19 70.1 6.1 7.8e-19 67.3 3.1 2.4 2 0 0 2 2 2 1 Biotin-requiring enzyme Biotin_lipoyl_2 PF13533.6 gi|15920811|ref|NP_376480.1| - 8.1e-18 64.0 7.3 5.6e-08 32.5 0.1 3.3 2 1 1 3 3 3 2 Biotin-lipoyl like HlyD_3 PF13437.6 gi|15920811|ref|NP_376480.1| - 5.3e-09 36.7 2.1 0.00092 19.9 0.0 3.2 3 1 1 4 4 4 2 HlyD family secretion protein HlyD_D23 PF16576.5 gi|15920811|ref|NP_376480.1| - 3.5e-08 32.9 0.9 0.006 15.8 0.0 2.9 2 1 1 3 3 3 2 Barrel-sandwich domain of CusB or HlyD membrane-fusion PTS_EIIA_1 PF00358.20 gi|15920811|ref|NP_376480.1| - 0.00011 22.0 1.7 0.1 12.4 0.3 4.0 1 1 1 2 2 1 1 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RnfC_N PF13375.6 gi|15920811|ref|NP_376480.1| - 0.00021 21.2 2.1 0.00078 19.4 2.1 2.0 1 1 0 1 1 1 1 RnfC Barrel sandwich hybrid domain NQRA PF05896.11 gi|15920811|ref|NP_376480.1| - 0.00023 20.7 0.7 0.00056 19.4 0.7 1.7 1 1 1 2 2 2 1 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) GCV_H PF01597.19 gi|15920811|ref|NP_376480.1| - 0.00029 20.7 0.7 0.001 18.9 0.2 2.1 2 1 1 3 3 3 1 Glycine cleavage H-protein PYNP_C PF07831.13 gi|15920811|ref|NP_376480.1| - 0.00074 19.1 0.5 0.29 10.8 0.0 2.4 1 1 1 2 2 2 2 Pyrimidine nucleoside phosphorylase C-terminal domain Peptidase_M23 PF01551.22 gi|15920811|ref|NP_376480.1| - 0.0096 16.1 0.9 0.53 10.5 0.8 2.7 1 1 0 1 1 1 1 Peptidase family M23 DUF2118 PF09891.9 gi|15920811|ref|NP_376480.1| - 0.012 15.6 0.7 0.027 14.4 0.7 1.7 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2118) YqfD PF06898.11 gi|15920811|ref|NP_376480.1| - 0.016 14.0 4.4 0.54 9.0 0.5 2.3 1 1 1 2 2 2 0 Putative stage IV sporulation protein YqfD QRPTase_N PF02749.16 gi|15920811|ref|NP_376480.1| - 0.02 15.0 0.0 0.9 9.6 0.0 2.7 2 1 1 3 3 3 0 Quinolinate phosphoribosyl transferase, N-terminal domain Pox_vIL-18BP PF05566.12 gi|15920811|ref|NP_376480.1| - 0.067 13.4 0.2 2.9 8.1 0.1 2.3 1 1 1 2 2 2 0 Orthopoxvirus interleukin 18 binding protein CPSase_L_D2 PF02786.17 gi|15920812|ref|NP_376481.1| - 2.1e-63 213.6 0.0 3.2e-63 213.0 0.0 1.3 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Biotin_carb_N PF00289.22 gi|15920812|ref|NP_376481.1| - 6e-45 152.3 0.1 1.3e-44 151.3 0.1 1.6 1 0 0 1 1 1 1 Biotin carboxylase, N-terminal domain Biotin_carb_C PF02785.19 gi|15920812|ref|NP_376481.1| - 1e-34 118.9 0.0 1.9e-34 118.0 0.0 1.5 1 0 0 1 1 1 1 Biotin carboxylase C-terminal domain Dala_Dala_lig_C PF07478.13 gi|15920812|ref|NP_376481.1| - 1.9e-05 24.3 0.1 0.0002 21.0 0.0 2.2 2 0 0 2 2 2 1 D-ala D-ala ligase C-terminus ATP-grasp PF02222.22 gi|15920812|ref|NP_376481.1| - 0.00025 20.7 0.1 0.00082 19.0 0.0 1.9 2 0 0 2 2 2 1 ATP-grasp domain ATP-grasp_3 PF02655.14 gi|15920812|ref|NP_376481.1| - 0.05 13.6 0.0 0.091 12.8 0.0 1.4 1 0 0 1 1 1 0 ATP-grasp domain Oxidored_nitro PF00148.19 gi|15920812|ref|NP_376481.1| - 0.065 11.9 0.2 0.15 10.8 0.1 1.6 2 0 0 2 2 2 0 Nitrogenase component 1 type Oxidoreductase ATP-grasp_5 PF13549.6 gi|15920812|ref|NP_376481.1| - 0.1 12.0 0.0 0.37 10.2 0.0 1.9 2 0 0 2 2 2 0 ATP-grasp domain BPD_transp_1 PF00528.22 gi|15920813|ref|NP_376482.1| - 2.8e-22 79.3 33.1 2.8e-14 53.3 11.6 3.5 3 1 1 4 4 4 2 Binding-protein-dependent transport system inner membrane component YpmT PF17431.2 gi|15920813|ref|NP_376482.1| - 3.6 7.7 10.6 1.9 8.6 0.6 4.6 4 0 0 4 4 4 0 Uncharacterized YmpT-like ABC_tran PF00005.27 gi|15920814|ref|NP_376483.1| - 1.5e-28 100.0 0.0 2.1e-28 99.5 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|15920814|ref|NP_376483.1| - 7.8e-08 32.5 1.3 0.0051 16.7 0.2 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|15920814|ref|NP_376483.1| - 0.00015 22.0 0.1 0.0013 19.1 0.1 2.3 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|15920814|ref|NP_376483.1| - 0.00023 21.6 0.0 0.00043 20.7 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 gi|15920814|ref|NP_376483.1| - 0.00038 20.0 0.1 0.01 15.3 0.1 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|15920814|ref|NP_376483.1| - 0.00045 20.1 0.0 0.00084 19.3 0.0 1.4 1 0 0 1 1 1 1 RsgA GTPase AAA_23 PF13476.6 gi|15920814|ref|NP_376483.1| - 0.0086 16.6 0.1 0.013 16.0 0.1 1.5 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|15920814|ref|NP_376483.1| - 0.0089 15.7 0.0 0.017 14.9 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA PF00004.29 gi|15920814|ref|NP_376483.1| - 0.012 16.0 0.1 0.1 13.1 0.1 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) MMR_HSR1 PF01926.23 gi|15920814|ref|NP_376483.1| - 0.02 15.0 0.0 0.047 13.8 0.0 1.8 1 1 0 1 1 1 0 50S ribosome-binding GTPase AAA_15 PF13175.6 gi|15920814|ref|NP_376483.1| - 0.021 14.6 0.0 0.049 13.3 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain Rad17 PF03215.15 gi|15920814|ref|NP_376483.1| - 0.048 13.6 0.1 0.07 13.0 0.1 1.5 1 1 0 1 1 1 0 Rad17 P-loop domain AAA_24 PF13479.6 gi|15920814|ref|NP_376483.1| - 0.064 13.0 0.0 0.11 12.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|15920814|ref|NP_376483.1| - 0.11 12.3 0.0 0.19 11.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|15920814|ref|NP_376483.1| - 0.11 12.4 0.2 0.24 11.3 0.2 1.6 1 0 0 1 1 1 0 NACHT domain AAA_33 PF13671.6 gi|15920814|ref|NP_376483.1| - 0.11 12.6 0.0 0.18 12.0 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|15920814|ref|NP_376483.1| - 0.16 12.2 0.1 0.37 11.0 0.1 1.6 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 gi|15920814|ref|NP_376483.1| - 0.19 10.9 0.0 0.44 9.7 0.0 1.5 1 0 0 1 1 1 0 NB-ARC domain MttA_Hcf106 PF02416.16 gi|15920816|ref|NP_376485.1| - 5.2e-11 41.7 7.7 1.7e-10 40.0 7.7 1.9 1 1 0 1 1 1 1 mttA/Hcf106 family DUF4834 PF16118.5 gi|15920816|ref|NP_376485.1| - 0.00015 22.6 2.2 0.00019 22.3 2.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4834) IFT20 PF14931.6 gi|15920816|ref|NP_376485.1| - 0.0046 17.1 7.6 0.0056 16.8 7.6 1.1 1 0 0 1 1 1 1 Intraflagellar transport complex B, subunit 20 DUF4446 PF14584.6 gi|15920816|ref|NP_376485.1| - 0.0057 16.7 1.2 0.0079 16.2 1.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF4446) DUF5320 PF17253.2 gi|15920816|ref|NP_376485.1| - 0.012 16.6 2.8 0.014 16.4 2.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5320) DUF1690 PF07956.11 gi|15920816|ref|NP_376485.1| - 0.018 15.4 7.2 0.021 15.3 7.2 1.1 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) ABC2_membrane_2 PF12679.7 gi|15920816|ref|NP_376485.1| - 0.11 11.8 0.4 0.13 11.5 0.4 1.1 1 0 0 1 1 1 0 ABC-2 family transporter protein BRI3BP PF14965.6 gi|15920816|ref|NP_376485.1| - 0.28 10.7 1.7 0.41 10.2 1.7 1.3 1 0 0 1 1 1 0 Negative regulator of p53/TP53 BLOC1_2 PF10046.9 gi|15920817|ref|NP_376486.1| - 0.00023 21.4 3.1 0.00023 21.4 3.1 1.7 1 1 1 2 2 2 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 Syntaxin_2 PF14523.6 gi|15920817|ref|NP_376486.1| - 0.00035 20.9 6.8 0.11 12.8 0.1 2.2 1 1 1 2 2 2 2 Syntaxin-like protein EzrA PF06160.12 gi|15920817|ref|NP_376486.1| - 0.00051 18.3 4.3 0.00061 18.1 4.3 1.1 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA DUF1351 PF07083.11 gi|15920817|ref|NP_376486.1| - 0.00067 19.5 5.0 0.0036 17.1 5.0 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF1351) BAR_3_WASP_bdg PF10456.9 gi|15920817|ref|NP_376486.1| - 0.0012 18.4 0.4 0.0014 18.2 0.4 1.1 1 0 0 1 1 1 1 WASP-binding domain of Sorting nexin protein Fib_alpha PF08702.10 gi|15920817|ref|NP_376486.1| - 0.0014 18.9 6.8 0.0016 18.6 6.8 1.0 1 0 0 1 1 1 1 Fibrinogen alpha/beta chain family Sds3 PF08598.11 gi|15920817|ref|NP_376486.1| - 0.0015 18.6 6.0 0.0019 18.3 6.0 1.1 1 0 0 1 1 1 1 Sds3-like Cob_adeno_trans PF01923.18 gi|15920817|ref|NP_376486.1| - 0.0024 18.0 0.2 0.0033 17.6 0.2 1.1 1 0 0 1 1 1 1 Cobalamin adenosyltransferase DUF2130 PF09903.9 gi|15920817|ref|NP_376486.1| - 0.0026 17.1 5.4 0.0034 16.7 5.4 1.2 1 0 0 1 1 1 1 Uncharacterized protein conserved in bacteria (DUF2130) DUF1192 PF06698.11 gi|15920817|ref|NP_376486.1| - 0.0036 17.3 3.6 0.0058 16.7 0.3 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF1192) MerR-DNA-bind PF09278.11 gi|15920817|ref|NP_376486.1| - 0.0043 17.6 0.2 0.052 14.1 0.1 2.1 2 0 0 2 2 2 1 MerR, DNA binding AAA_13 PF13166.6 gi|15920817|ref|NP_376486.1| - 0.0063 15.2 6.2 0.0073 15.0 6.2 1.0 1 0 0 1 1 1 1 AAA domain DUF1664 PF07889.12 gi|15920817|ref|NP_376486.1| - 0.0064 16.5 1.7 0.01 15.9 1.7 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1664) DUF4407 PF14362.6 gi|15920817|ref|NP_376486.1| - 0.007 15.8 1.6 0.01 15.2 1.6 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4407) ApoLp-III PF07464.11 gi|15920817|ref|NP_376486.1| - 0.0081 16.3 4.3 0.011 15.8 4.3 1.2 1 0 0 1 1 1 1 Apolipophorin-III precursor (apoLp-III) BLYB PF05289.11 gi|15920817|ref|NP_376486.1| - 0.0095 16.2 3.7 0.012 15.8 3.7 1.1 1 0 0 1 1 1 1 Borrelia hemolysin accessory protein Muted PF14942.6 gi|15920817|ref|NP_376486.1| - 0.0098 16.2 7.0 0.049 14.0 0.5 2.0 1 1 1 2 2 2 1 Organelle biogenesis, Muted-like protein Baculo_PEP_C PF04513.12 gi|15920817|ref|NP_376486.1| - 0.0098 15.9 0.4 0.048 13.7 0.4 1.9 1 1 0 1 1 1 1 Baculovirus polyhedron envelope protein, PEP, C terminus PKcGMP_CC PF16808.5 gi|15920817|ref|NP_376486.1| - 0.012 15.5 3.5 0.012 15.5 3.5 2.4 2 0 0 2 2 2 0 Coiled-coil N-terminus of cGMP-dependent protein kinase Apolipoprotein PF01442.18 gi|15920817|ref|NP_376486.1| - 0.012 15.5 4.2 0.021 14.7 4.2 1.4 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain CdvA PF18822.1 gi|15920817|ref|NP_376486.1| - 0.013 15.3 9.8 0.17 11.7 2.5 2.2 1 1 1 2 2 2 0 CdvA-like coiled-coil domain Tektin PF03148.14 gi|15920817|ref|NP_376486.1| - 0.014 14.2 5.6 0.016 14.0 5.6 1.1 1 0 0 1 1 1 0 Tektin family Spectrin PF00435.21 gi|15920817|ref|NP_376486.1| - 0.014 15.9 2.2 0.068 13.7 0.5 2.0 1 1 1 2 2 2 0 Spectrin repeat DUF3150 PF11348.8 gi|15920817|ref|NP_376486.1| - 0.016 14.5 1.0 0.017 14.3 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3150) RRF PF01765.19 gi|15920817|ref|NP_376486.1| - 0.016 15.2 3.0 0.022 14.7 3.0 1.3 1 0 0 1 1 1 0 Ribosome recycling factor Vps53_N PF04100.12 gi|15920817|ref|NP_376486.1| - 0.018 14.0 4.2 0.022 13.7 4.2 1.1 1 0 0 1 1 1 0 Vps53-like, N-terminal Golgin_A5 PF09787.9 gi|15920817|ref|NP_376486.1| - 0.019 14.5 7.7 0.022 14.2 7.7 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 5 ATP-synt_D PF01813.17 gi|15920817|ref|NP_376486.1| - 0.027 14.3 5.3 0.14 12.0 5.3 1.9 1 1 0 1 1 1 0 ATP synthase subunit D CHDCT2 PF08074.11 gi|15920817|ref|NP_376486.1| - 0.029 14.6 2.3 0.029 14.5 1.1 1.6 1 1 0 1 1 1 0 CHDCT2 (NUC038) domain HAUS6_N PF14661.6 gi|15920817|ref|NP_376486.1| - 0.038 13.6 5.7 0.097 12.2 5.7 1.6 1 1 0 1 1 1 0 HAUS augmin-like complex subunit 6 N-terminus TPR_MLP1_2 PF07926.12 gi|15920817|ref|NP_376486.1| - 0.04 14.0 7.0 0.089 12.9 5.1 1.9 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein FliT PF05400.13 gi|15920817|ref|NP_376486.1| - 0.052 14.4 4.0 0.55 11.1 4.0 2.1 1 1 0 1 1 1 0 Flagellar protein FliT DUF4618 PF15397.6 gi|15920817|ref|NP_376486.1| - 0.055 12.9 7.4 0.13 11.7 7.4 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4618) DUF16 PF01519.16 gi|15920817|ref|NP_376486.1| - 0.058 13.9 6.2 0.14 12.7 6.0 1.7 1 1 0 1 1 1 0 Protein of unknown function DUF16 FlxA PF14282.6 gi|15920817|ref|NP_376486.1| - 0.073 13.1 5.7 0.28 11.2 3.7 2.3 1 1 1 2 2 2 0 FlxA-like protein DUF948 PF06103.11 gi|15920817|ref|NP_376486.1| - 0.076 13.3 1.6 0.72 10.1 1.5 2.4 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) OmpH PF03938.14 gi|15920817|ref|NP_376486.1| - 0.084 13.2 7.0 0.99 9.7 0.2 1.9 1 1 0 1 1 1 0 Outer membrane protein (OmpH-like) Tnp_22_trimer PF17489.2 gi|15920817|ref|NP_376486.1| - 0.095 12.7 1.4 0.095 12.7 1.4 2.2 2 0 0 2 2 1 0 L1 transposable element trimerization domain Exonuc_VII_L PF02601.15 gi|15920817|ref|NP_376486.1| - 0.11 12.0 2.9 0.13 11.8 2.9 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit bZIP_2 PF07716.15 gi|15920817|ref|NP_376486.1| - 0.11 12.6 1.7 0.11 12.6 1.7 2.2 2 0 0 2 2 2 0 Basic region leucine zipper FliD_C PF07195.12 gi|15920817|ref|NP_376486.1| - 0.12 11.8 5.7 2.2 7.6 0.9 2.0 1 1 1 2 2 2 0 Flagellar hook-associated protein 2 C-terminus SAM_Exu PF18609.1 gi|15920817|ref|NP_376486.1| - 0.13 12.4 2.6 0.19 11.9 0.5 2.0 1 1 1 2 2 2 0 Exuperantia SAM-like domain Lectin_N PF03954.14 gi|15920817|ref|NP_376486.1| - 0.16 11.7 1.9 0.21 11.3 1.9 1.4 1 1 0 1 1 1 0 Hepatic lectin, N-terminal domain DUF4140 PF13600.6 gi|15920817|ref|NP_376486.1| - 0.16 12.4 5.4 0.14 12.6 0.9 2.1 1 1 1 2 2 2 0 N-terminal domain of unknown function (DUF4140) Prominin PF05478.11 gi|15920817|ref|NP_376486.1| - 0.17 9.8 2.8 0.24 9.3 2.8 1.2 1 0 0 1 1 1 0 Prominin LPD5 PF18799.1 gi|15920817|ref|NP_376486.1| - 0.18 12.2 7.1 1.1 9.6 0.8 2.0 1 1 1 2 2 2 0 Large polyvalent protein-associated domain 5 YlqD PF11068.8 gi|15920817|ref|NP_376486.1| - 0.19 12.1 6.0 4.2 7.7 4.5 2.3 1 1 1 2 2 2 0 YlqD protein ApoO PF09769.9 gi|15920817|ref|NP_376486.1| - 0.2 11.6 0.9 0.98 9.4 0.2 2.0 1 1 1 2 2 2 0 Apolipoprotein O Tup_N PF08581.10 gi|15920817|ref|NP_376486.1| - 0.2 12.0 8.9 0.31 11.4 7.4 2.0 1 1 1 2 2 2 0 Tup N-terminal PIN_8 PF18476.1 gi|15920817|ref|NP_376486.1| - 0.2 11.5 5.8 0.24 11.2 5.8 1.1 1 0 0 1 1 1 0 PIN like domain GreA_GreB_N PF03449.15 gi|15920817|ref|NP_376486.1| - 0.23 11.7 6.3 0.53 10.5 6.3 1.7 1 1 0 1 1 1 0 Transcription elongation factor, N-terminal Prefoldin PF02996.17 gi|15920817|ref|NP_376486.1| - 0.23 11.4 8.2 0.45 10.4 2.8 2.4 1 1 1 2 2 2 0 Prefoldin subunit Mt_ATP-synt_D PF05873.12 gi|15920817|ref|NP_376486.1| - 0.29 11.0 6.2 0.75 9.6 2.7 2.1 1 1 1 2 2 2 0 ATP synthase D chain, mitochondrial (ATP5H) Fzo_mitofusin PF04799.13 gi|15920817|ref|NP_376486.1| - 0.29 10.7 5.7 0.67 9.5 1.8 2.0 1 1 0 1 1 1 0 fzo-like conserved region YtxH PF12732.7 gi|15920817|ref|NP_376486.1| - 0.31 11.6 4.6 5.2 7.7 4.6 2.3 1 1 0 1 1 1 0 YtxH-like protein DUF5320 PF17253.2 gi|15920817|ref|NP_376486.1| - 0.34 12.0 2.4 0.57 11.3 2.2 1.6 1 1 0 1 1 1 0 Family of unknown function (DUF5320) DUF3375 PF11855.8 gi|15920817|ref|NP_376486.1| - 0.55 9.1 7.5 0.39 9.6 2.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3375) DUF2203 PF09969.9 gi|15920817|ref|NP_376486.1| - 0.58 10.9 4.3 3.5 8.4 4.3 1.9 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) DUF883 PF05957.13 gi|15920817|ref|NP_376486.1| - 0.66 10.6 2.7 8.2 7.1 0.1 2.4 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF883) TMPIT PF07851.13 gi|15920817|ref|NP_376486.1| - 0.66 9.2 5.0 1 8.5 5.0 1.4 1 1 0 1 1 1 0 TMPIT-like protein VASP_tetra PF08776.11 gi|15920817|ref|NP_376486.1| - 0.94 9.1 10.5 0.49 10.0 0.5 2.5 2 0 0 2 2 2 0 VASP tetramerisation domain Swi5 PF07061.11 gi|15920817|ref|NP_376486.1| - 0.99 9.5 9.2 1.7 8.8 2.0 3.1 1 1 1 2 2 2 0 Swi5 ABC_tran_CTD PF16326.5 gi|15920817|ref|NP_376486.1| - 1.2 9.5 10.8 1.4 9.3 4.2 2.4 1 1 2 3 3 3 0 ABC transporter C-terminal domain DivIC PF04977.15 gi|15920817|ref|NP_376486.1| - 1.5 8.7 7.9 2.3 8.0 2.6 2.6 2 2 0 2 2 2 0 Septum formation initiator DASH_Dad1 PF08649.10 gi|15920817|ref|NP_376486.1| - 1.6 9.0 6.1 3 8.1 0.3 3.0 1 1 1 2 2 2 0 DASH complex subunit Dad1 ACCA PF03255.14 gi|15920817|ref|NP_376486.1| - 1.6 8.6 7.3 1.4 8.8 2.5 2.1 1 1 1 2 2 2 0 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit TSC22 PF01166.18 gi|15920817|ref|NP_376486.1| - 1.7 9.0 7.8 1.2 9.4 2.4 2.9 1 1 2 3 3 3 0 TSC-22/dip/bun family bZIP_1 PF00170.21 gi|15920817|ref|NP_376486.1| - 2.8 8.1 12.2 0.56 10.3 2.4 2.7 1 1 0 2 2 2 0 bZIP transcription factor Csm1_N PF18504.1 gi|15920817|ref|NP_376486.1| - 3 8.3 9.1 0.76 10.2 3.5 2.3 1 1 0 2 2 2 0 Csm1 N-terminal domain XhlA PF10779.9 gi|15920817|ref|NP_376486.1| - 3.5 7.9 7.6 0.97 9.7 2.9 2.4 1 1 1 2 2 2 0 Haemolysin XhlA FlaC_arch PF05377.11 gi|15920817|ref|NP_376486.1| - 4.4 7.8 9.2 6.5 7.2 0.6 3.2 1 1 1 3 3 3 0 Flagella accessory protein C (FlaC) YabA PF06156.13 gi|15920817|ref|NP_376486.1| - 4.7 7.9 7.7 9.6 6.9 1.3 2.3 1 1 1 2 2 2 0 Initiation control protein YabA GTP-bdg_M PF16360.5 gi|15920817|ref|NP_376486.1| - 5.3 7.7 8.6 25 5.6 6.0 2.3 1 1 1 2 2 2 0 GTP-binding GTPase Middle Region Med21 PF11221.8 gi|15920817|ref|NP_376486.1| - 8.4 6.6 10.2 14 5.9 0.9 2.3 1 1 0 2 2 2 0 Subunit 21 of Mediator complex MttA_Hcf106 PF02416.16 gi|15920817|ref|NP_376486.1| - 8.6 5.8 8.2 1.9 7.9 2.9 2.5 2 1 0 2 2 2 0 mttA/Hcf106 family Rad50_zn_hook PF04423.14 gi|15920817|ref|NP_376486.1| - 9.8 6.1 9.2 5.3 7.0 0.8 3.0 3 0 0 3 3 3 0 Rad50 zinc hook motif TatC PF00902.18 gi|15920818|ref|NP_376487.1| - 9.4e-50 169.3 16.2 1.2e-49 168.9 16.2 1.1 1 0 0 1 1 1 1 Sec-independent protein translocase protein (TatC) Aconitase PF00330.20 gi|15920819|ref|NP_376488.1| - 1.4e-78 265.0 2.4 2.1e-76 257.8 2.4 2.4 1 1 0 1 1 1 1 Aconitase family (aconitate hydratase) DUF521 PF04412.13 gi|15920819|ref|NP_376488.1| - 0.0078 15.0 0.0 0.012 14.4 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF521) RCDG1 PF15725.5 gi|15920819|ref|NP_376488.1| - 0.04 14.3 0.0 0.097 13.1 0.0 1.6 1 0 0 1 1 1 0 Renal cancer differentiation gene 1 protein LAT PF15234.6 gi|15920819|ref|NP_376488.1| - 0.065 13.0 0.0 0.1 12.3 0.0 1.2 1 0 0 1 1 1 0 Linker for activation of T-cells Aconitase_C PF00694.19 gi|15920820|ref|NP_376489.1| - 1.3e-21 77.3 0.0 2.2e-21 76.5 0.0 1.4 1 0 0 1 1 1 1 Aconitase C-terminal domain Aconitase_2_N PF06434.13 gi|15920820|ref|NP_376489.1| - 0.011 15.4 1.0 0.56 9.8 1.0 2.2 1 1 0 1 1 1 0 Aconitate hydratase 2 N-terminus Ribosomal_L22e PF01776.17 gi|15920820|ref|NP_376489.1| - 0.062 13.7 0.0 14 6.1 0.0 2.2 2 0 0 2 2 2 0 Ribosomal L22e protein family Nitroreductase PF00881.24 gi|15920821|ref|NP_376490.1| - 2.1e-29 102.7 0.0 4.1e-29 101.8 0.0 1.5 1 1 0 1 1 1 1 Nitroreductase family TM1586_NiRdase PF14512.6 gi|15920821|ref|NP_376490.1| - 6.6e-06 25.9 0.5 0.0086 15.7 0.1 2.9 2 1 0 2 2 2 2 Putative TM nitroreductase Beta_lactamase3 PF17030.5 gi|15920821|ref|NP_376490.1| - 0.056 12.7 0.0 0.1 11.9 0.0 1.5 1 0 0 1 1 1 0 Putative beta-lactamase-like family LepB_GAP_C PF18227.1 gi|15920821|ref|NP_376490.1| - 0.17 12.4 1.5 0.35 11.4 1.5 1.5 1 0 0 1 1 1 0 LepB GAP domain C-terminal subdomain Aminotran_5 PF00266.19 gi|15920822|ref|NP_376491.1| - 2.2e-37 128.9 0.0 2.8e-37 128.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V NAD_binding_7 PF13241.6 gi|15920822|ref|NP_376491.1| - 0.015 15.7 0.0 0.048 14.1 0.0 1.8 1 1 0 1 1 1 0 Putative NAD(P)-binding Nbl1_Borealin_N PF10444.9 gi|15920823|ref|NP_376492.1| - 0.019 14.6 0.5 0.042 13.5 0.1 1.8 2 0 0 2 2 2 0 Nbl1 / Borealin N terminal Pox_polyA_pol_N PF12630.7 gi|15920823|ref|NP_376492.1| - 0.48 10.8 9.7 0.43 11.0 8.4 1.6 1 1 0 1 1 1 0 Poxvirus poly(A) polymerase N-terminal domain EVE PF01878.18 gi|15920824|ref|NP_376493.1| - 2.3e-17 63.4 0.3 2.6e-17 63.2 0.3 1.0 1 0 0 1 1 1 1 EVE domain DUF1830 PF08865.11 gi|15920824|ref|NP_376493.1| - 0.15 12.1 0.3 1.9 8.5 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1830) DUF1614 PF07758.11 gi|15920825|ref|NP_376494.1| - 5.2e-47 160.0 16.5 5.2e-47 160.0 16.5 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF1614) NTP_transf_3 PF12804.7 gi|15920826|ref|NP_376495.1| - 1.1e-08 35.6 0.0 2.5e-08 34.4 0.0 1.6 1 1 0 1 1 1 1 MobA-like NTP transferase domain NTP_transferase PF00483.23 gi|15920826|ref|NP_376495.1| - 0.018 14.6 0.0 0.023 14.3 0.0 1.2 1 0 0 1 1 1 0 Nucleotidyl transferase CTP_transf_3 PF02348.19 gi|15920826|ref|NP_376495.1| - 0.019 14.9 0.0 0.084 12.8 0.0 2.0 1 1 0 1 1 1 0 Cytidylyltransferase PucR PF07905.11 gi|15920826|ref|NP_376495.1| - 0.17 12.2 0.0 0.31 11.3 0.0 1.4 1 0 0 1 1 1 0 Purine catabolism regulatory protein-like family AIRS PF00586.24 gi|15920827|ref|NP_376496.1| - 1.4e-10 41.7 0.1 2.5e-10 40.9 0.1 1.3 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain AIRS_C PF02769.22 gi|15920827|ref|NP_376496.1| - 9.4e-10 38.8 0.0 1.4e-09 38.3 0.0 1.3 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain DUF2114 PF09887.9 gi|15920827|ref|NP_376496.1| - 0.025 13.1 0.1 0.06 11.8 0.0 1.6 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2114) ABC_tran PF00005.27 gi|15920828|ref|NP_376497.1| - 1.5e-31 109.7 0.0 2.2e-31 109.2 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|15920828|ref|NP_376497.1| - 6.6e-14 52.4 0.1 1.9e-08 34.5 0.0 2.3 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|15920828|ref|NP_376497.1| - 2.5e-05 24.2 0.2 0.0061 16.3 0.8 2.3 2 0 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 gi|15920828|ref|NP_376497.1| - 0.0012 18.5 0.0 0.0025 17.5 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain Hydrolase PF00702.26 gi|15920828|ref|NP_376497.1| - 0.0016 18.8 0.0 0.0066 16.8 0.0 2.1 1 1 1 2 2 2 1 haloacid dehalogenase-like hydrolase Rad17 PF03215.15 gi|15920828|ref|NP_376497.1| - 0.0028 17.6 0.1 0.0065 16.4 0.1 1.6 1 1 0 1 1 1 1 Rad17 P-loop domain SMC_N PF02463.19 gi|15920828|ref|NP_376497.1| - 0.0073 15.8 0.2 1.7 8.0 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain SRP54 PF00448.22 gi|15920828|ref|NP_376497.1| - 0.0077 15.9 0.1 0.016 14.8 0.1 1.4 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain Thymidylate_kin PF02223.17 gi|15920828|ref|NP_376497.1| - 0.011 15.5 0.1 0.17 11.5 0.0 2.4 2 0 0 2 2 2 0 Thymidylate kinase SbcCD_C PF13558.6 gi|15920828|ref|NP_376497.1| - 0.012 15.8 0.0 0.19 12.0 0.0 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit Peripla_BP_2 PF01497.18 gi|15920828|ref|NP_376497.1| - 0.033 13.7 0.0 0.05 13.2 0.0 1.3 1 0 0 1 1 1 0 Periplasmic binding protein AAA_23 PF13476.6 gi|15920828|ref|NP_376497.1| - 0.041 14.4 10.4 1.5 9.3 10.4 2.5 1 1 0 1 1 1 0 AAA domain AAA_2 PF07724.14 gi|15920828|ref|NP_376497.1| - 0.041 14.0 0.0 0.75 9.9 0.0 2.3 2 1 0 2 2 1 0 AAA domain (Cdc48 subfamily) NTPase_1 PF03266.15 gi|15920828|ref|NP_376497.1| - 0.041 13.8 0.1 0.085 12.8 0.1 1.6 1 0 0 1 1 1 0 NTPase AAA PF00004.29 gi|15920828|ref|NP_376497.1| - 0.055 13.9 1.0 0.36 11.3 1.0 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) CDH1_2_SANT_HL1 PF18375.1 gi|15920828|ref|NP_376497.1| - 0.061 14.0 0.1 0.17 12.6 0.1 1.7 1 0 0 1 1 1 0 CDH1/2 SANT-Helical linker 1 AAA_7 PF12775.7 gi|15920828|ref|NP_376497.1| - 0.065 12.7 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_30 PF13604.6 gi|15920828|ref|NP_376497.1| - 0.066 12.9 0.0 0.14 11.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|15920828|ref|NP_376497.1| - 0.14 12.3 0.0 0.36 11.0 0.0 1.8 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|15920828|ref|NP_376497.1| - 0.16 11.8 0.0 1.3 8.9 0.0 2.2 2 0 0 2 2 2 0 RsgA GTPase AAA_18 PF13238.6 gi|15920828|ref|NP_376497.1| - 0.18 12.3 0.7 1.1 9.8 0.6 2.2 1 1 0 1 1 1 0 AAA domain ABC2_membrane PF01061.24 gi|15920829|ref|NP_376498.1| - 5.1e-13 48.9 17.0 5.1e-13 48.9 17.0 2.7 2 1 1 3 3 3 2 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|15920829|ref|NP_376498.1| - 1.7e-05 24.1 38.9 0.00075 18.7 38.9 2.2 1 1 0 1 1 1 1 ABC-2 family transporter protein ECH_1 PF00378.20 gi|15920830|ref|NP_376499.1| - 2e-35 122.3 0.1 2.3e-35 122.1 0.1 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|15920830|ref|NP_376499.1| - 5.9e-23 81.9 0.0 7.9e-23 81.5 0.0 1.1 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase COX1 PF00115.20 gi|15920831|ref|NP_376500.1| - 7.1e-70 236.0 67.9 7.1e-70 236.0 67.9 1.6 1 1 1 2 2 2 2 Cytochrome C and Quinol oxidase polypeptide I Rhodanese PF00581.20 gi|15920833|ref|NP_376502.1| - 3.7e-13 49.9 0.0 5.3e-13 49.4 0.0 1.2 1 0 0 1 1 1 1 Rhodanese-like domain Pyr_redox_2 PF07992.14 gi|15920835|ref|NP_376504.1| - 1e-13 51.2 0.0 2.9e-12 46.4 0.0 2.2 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|15920835|ref|NP_376504.1| - 0.039 14.5 0.2 2.1 9.0 0.0 2.8 2 1 0 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase DrsE PF02635.15 gi|15920836|ref|NP_376505.1| - 3e-07 30.8 0.0 3.6e-07 30.6 0.0 1.1 1 0 0 1 1 1 1 DsrE/DsrF-like family DrsE_2 PF13686.6 gi|15920836|ref|NP_376505.1| - 0.00034 20.5 0.3 0.15 11.9 0.0 2.0 1 1 1 2 2 2 2 DsrE/DsrF/DrsH-like family DUF5479 PF17575.2 gi|15920836|ref|NP_376505.1| - 0.1 13.2 0.0 0.16 12.5 0.0 1.3 1 0 0 1 1 1 0 Family of unknown function (DUF5479) DUF1641 PF07849.11 gi|15920837|ref|NP_376506.1| - 3.7e-13 49.1 0.2 1.5e-12 47.2 0.2 2.2 1 0 0 1 1 1 1 Protein of unknown function (DUF1641) DUF1765 PF08578.10 gi|15920837|ref|NP_376506.1| - 0.00028 21.3 0.4 1.4 9.4 0.1 3.5 1 1 3 4 4 4 1 Protein of unknown function (DUF1765) DUF2267 PF10025.9 gi|15920837|ref|NP_376506.1| - 0.00067 19.9 0.3 0.5 10.6 0.0 3.6 2 1 2 4 4 4 1 Uncharacterized conserved protein (DUF2267) ADSL_C PF10397.9 gi|15920837|ref|NP_376506.1| - 0.0039 17.7 1.6 0.66 10.6 0.0 3.7 3 1 1 4 4 4 1 Adenylosuccinate lyase C-terminus Patatin PF01734.22 gi|15920837|ref|NP_376506.1| - 0.021 15.0 0.4 1.2 9.2 0.4 3.2 1 1 0 1 1 1 0 Patatin-like phospholipase DUF5327 PF17261.2 gi|15920837|ref|NP_376506.1| - 0.022 15.5 0.7 49 4.7 0.0 3.5 2 1 0 3 3 3 0 Family of unknown function (DUF5327) GMAP PF06540.11 gi|15920837|ref|NP_376506.1| - 0.052 13.6 3.3 7.9 6.6 0.0 4.4 4 1 1 5 5 5 0 Galanin message associated peptide (GMAP) efThoc1 PF11957.8 gi|15920837|ref|NP_376506.1| - 0.13 10.9 0.3 3.8 6.1 0.1 2.2 2 0 0 2 2 2 0 THO complex subunit 1 transcription elongation factor FRG2 PF15315.6 gi|15920837|ref|NP_376506.1| - 0.24 11.6 0.0 18 5.5 0.0 2.2 2 0 0 2 2 2 0 Facioscapulohumeral muscular dystrophy candidate 2 Sipho_Gp157 PF05565.11 gi|15920837|ref|NP_376506.1| - 1.3 9.1 8.2 0.11 12.4 0.4 2.9 3 1 1 4 4 4 0 Siphovirus Gp157 DUF2780 PF11075.8 gi|15920837|ref|NP_376506.1| - 1.3 9.1 9.0 0.27 11.4 0.5 3.3 2 1 1 4 4 4 0 Protein of unknown function VcgC/VcgE (DUF2780) PRA-PH PF01503.17 gi|15920837|ref|NP_376506.1| - 2.7 8.5 7.4 39 4.8 0.3 3.8 4 0 0 4 4 4 0 Phosphoribosyl-ATP pyrophosphohydrolase DUF5617 PF18493.1 gi|15920837|ref|NP_376506.1| - 3.2 7.9 8.1 3.3 7.9 0.4 4.0 2 2 2 4 4 4 0 Domain of unknown function (DUF5617) NAD_binding_2 PF03446.15 gi|15920839|ref|NP_376508.1| - 1.3e-32 113.2 0.2 1.9e-32 112.6 0.2 1.2 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_11 PF14833.6 gi|15920839|ref|NP_376508.1| - 4.3e-25 88.3 0.1 6.3e-25 87.8 0.1 1.3 1 0 0 1 1 1 1 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F420_oxidored PF03807.17 gi|15920839|ref|NP_376508.1| - 2.2e-06 28.1 0.0 9.3e-06 26.1 0.0 2.0 2 1 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent Shikimate_DH PF01488.20 gi|15920839|ref|NP_376508.1| - 5.2e-05 23.3 0.0 0.00011 22.2 0.0 1.6 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase GFO_IDH_MocA PF01408.22 gi|15920839|ref|NP_376508.1| - 0.00036 21.3 0.0 0.0012 19.7 0.0 1.8 2 0 0 2 2 2 1 Oxidoreductase family, NAD-binding Rossmann fold 2-Hacid_dh_C PF02826.19 gi|15920839|ref|NP_376508.1| - 0.0021 17.5 0.1 0.0038 16.6 0.1 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ApbA PF02558.16 gi|15920839|ref|NP_376508.1| - 0.07 12.8 0.2 0.38 10.4 0.0 2.0 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA UDPG_MGDP_dh_C PF03720.15 gi|15920839|ref|NP_376508.1| - 0.1 13.0 0.0 0.31 11.5 0.0 1.8 1 1 1 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DUF2203 PF09969.9 gi|15920840|ref|NP_376509.1| - 1.1e-30 106.8 0.2 6.2e-30 104.4 0.2 1.8 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2203) Peptidase_M1 PF01433.20 gi|15920843|ref|NP_376512.1| - 2e-82 276.0 2.4 3.7e-82 275.1 2.4 1.4 1 0 0 1 1 1 1 Peptidase family M1 domain Peptidase_M1_N PF17900.1 gi|15920843|ref|NP_376512.1| - 2.5e-34 119.1 0.4 6.2e-34 117.8 0.1 1.8 2 0 0 2 2 2 1 Peptidase M1 N-terminal domain ERAP1_C PF11838.8 gi|15920843|ref|NP_376512.1| - 1.3e-30 107.1 2.2 1.9e-30 106.5 2.2 1.3 1 0 0 1 1 1 1 ERAP1-like C-terminal domain Aminopep PF10023.9 gi|15920843|ref|NP_376512.1| - 0.0067 15.8 1.5 0.02 14.3 0.2 2.0 2 0 0 2 2 2 1 Putative aminopeptidase Ribosomal_S13 PF00416.22 gi|15920844|ref|NP_376513.1| - 0.014 15.8 0.3 0.11 12.9 0.0 2.4 2 2 0 2 2 2 0 Ribosomal protein S13/S18 PLDc_2 PF13091.6 gi|15920844|ref|NP_376513.1| - 0.026 14.4 0.4 0.075 12.9 0.1 1.9 2 0 0 2 2 2 0 PLD-like domain DUF2207 PF09972.9 gi|15920844|ref|NP_376513.1| - 0.034 12.9 0.4 0.04 12.7 0.4 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) tRNA-synt_1 PF00133.22 gi|15920845|ref|NP_376514.1| - 6.5e-59 199.7 0.0 1.3e-47 162.4 0.0 2.3 2 1 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1g PF09334.11 gi|15920845|ref|NP_376514.1| - 6.4e-27 94.3 0.3 2e-13 49.8 0.0 3.8 3 1 1 4 4 4 3 tRNA synthetases class I (M) Anticodon_1 PF08264.13 gi|15920845|ref|NP_376514.1| - 8.8e-22 77.7 4.2 2.6e-21 76.2 4.2 1.8 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1e PF01406.19 gi|15920845|ref|NP_376514.1| - 6.3e-14 52.0 1.1 2.2e-06 27.2 0.0 2.9 3 0 0 3 3 3 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1_2 PF13603.6 gi|15920845|ref|NP_376514.1| - 8.2e-11 41.8 0.0 2.7e-10 40.1 0.0 1.8 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 PMC2NT PF08066.12 gi|15920845|ref|NP_376514.1| - 0.17 12.6 1.2 0.74 10.5 0.1 2.6 2 0 0 2 2 2 0 PMC2NT (NUC016) domain Radical_SAM PF04055.21 gi|15920846|ref|NP_376515.1| - 4.9e-11 43.3 0.0 1.1e-10 42.1 0.0 1.6 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|15920846|ref|NP_376515.1| - 3.6e-08 33.8 0.4 1.3e-07 32.0 0.0 1.9 2 0 0 2 2 2 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|15920846|ref|NP_376515.1| - 4.6e-06 26.7 0.0 1.2e-05 25.4 0.0 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain Peptidase_M20 PF01546.28 gi|15920847|ref|NP_376516.1| - 7.7e-38 130.3 0.0 9.9e-38 129.9 0.0 1.1 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|15920847|ref|NP_376516.1| - 5.5e-14 52.0 0.0 1.1e-13 51.0 0.0 1.5 1 0 0 1 1 1 1 Peptidase dimerisation domain 30K_MP_core PF17644.1 gi|15920847|ref|NP_376516.1| - 0.03 14.2 0.0 0.063 13.1 0.0 1.5 1 0 0 1 1 1 0 Core domain of 30K viral movement proteins CmlA_N PF18456.1 gi|15920848|ref|NP_376517.1| - 0.095 12.0 0.0 0.095 12.0 0.0 1.1 1 0 0 1 1 1 0 Diiron non-heme beta-hydroxylase N-terminal domain PriX PF18689.1 gi|15920849|ref|NP_376518.1| - 7.9e-43 144.8 2.2 1e-42 144.5 2.2 1.1 1 0 0 1 1 1 1 Primase X ATP_bind_3 PF01171.20 gi|15920850|ref|NP_376519.1| - 3.7e-16 59.4 0.0 6.1e-16 58.7 0.0 1.3 1 0 0 1 1 1 1 PP-loop family PAPS_reduct PF01507.19 gi|15920850|ref|NP_376519.1| - 8.6e-05 22.7 0.0 0.00023 21.2 0.0 1.7 1 1 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family tRNA_Me_trans PF03054.16 gi|15920850|ref|NP_376519.1| - 0.00017 20.5 0.0 0.00029 19.8 0.0 1.3 1 0 0 1 1 1 1 tRNA methyl transferase NAD_synthase PF02540.17 gi|15920850|ref|NP_376519.1| - 0.00061 19.0 0.0 0.00078 18.6 0.0 1.2 1 0 0 1 1 1 1 NAD synthase QueC PF06508.13 gi|15920850|ref|NP_376519.1| - 0.01 15.3 0.0 0.13 11.8 0.0 2.3 2 0 0 2 2 2 0 Queuosine biosynthesis protein QueC Usp PF00582.26 gi|15920850|ref|NP_376519.1| - 0.013 16.0 0.0 0.064 13.8 0.0 2.0 1 1 0 1 1 1 0 Universal stress protein family RecR PF02132.15 gi|15920850|ref|NP_376519.1| - 0.014 15.0 2.7 0.014 15.0 2.7 3.4 3 0 0 3 3 3 0 RecR protein zinc_ribbon_15 PF17032.5 gi|15920850|ref|NP_376519.1| - 0.045 14.5 4.3 0.44 11.3 0.2 3.1 3 0 0 3 3 3 0 zinc-ribbon family ThiI PF02568.14 gi|15920850|ref|NP_376519.1| - 0.066 12.8 0.1 0.11 12.0 0.1 1.3 1 0 0 1 1 1 0 Thiamine biosynthesis protein (ThiI) RNase_PH_C PF03725.15 gi|15920850|ref|NP_376519.1| - 0.15 12.2 0.1 0.55 10.3 0.1 1.9 2 0 0 2 2 2 0 3' exoribonuclease family, domain 2 Vps36-NZF-N PF16988.5 gi|15920850|ref|NP_376519.1| - 0.17 11.3 1.6 0.94 8.9 0.0 2.5 2 1 0 2 2 2 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain Asn_synthase PF00733.21 gi|15920850|ref|NP_376519.1| - 0.22 11.2 0.0 0.31 10.6 0.0 1.2 1 0 0 1 1 1 0 Asparagine synthase zf-RRN7 PF11781.8 gi|15920850|ref|NP_376519.1| - 0.46 10.2 3.6 0.57 9.9 0.0 2.8 3 0 0 3 3 3 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 C1_2 PF03107.16 gi|15920850|ref|NP_376519.1| - 0.58 10.5 4.5 0.57 10.5 0.2 2.8 3 0 0 3 3 3 0 C1 domain Transp_Tc5_C PF04236.15 gi|15920850|ref|NP_376519.1| - 0.8 10.1 3.9 0.73 10.2 0.7 2.3 2 0 0 2 2 2 0 Tc5 transposase C-terminal domain DZR PF12773.7 gi|15920850|ref|NP_376519.1| - 4.5 7.4 8.5 0.77 9.8 0.8 2.9 3 0 0 3 3 3 0 Double zinc ribbon ThiP_synth PF10120.9 gi|15920852|ref|NP_376521.1| - 0.17 11.5 0.0 0.59 9.7 0.0 1.7 1 1 0 1 1 1 0 Thiamine-phosphate synthase SIR2 PF02146.17 gi|15920853|ref|NP_376522.1| - 2.5e-53 180.6 0.0 3.2e-53 180.3 0.0 1.1 1 0 0 1 1 1 1 Sir2 family SSF PF00474.17 gi|15920855|ref|NP_376524.1| - 1.4e-12 47.3 29.6 2.9e-12 46.2 29.6 1.5 1 0 0 1 1 1 1 Sodium:solute symporter family HTH_34 PF13601.6 gi|15920856|ref|NP_376525.1| - 8.2e-05 22.7 0.2 0.00014 22.0 0.2 1.4 1 1 0 1 1 1 1 Winged helix DNA-binding domain Phage_rep_org_N PF09681.10 gi|15920856|ref|NP_376525.1| - 0.00046 20.1 0.9 0.00078 19.4 0.9 1.4 1 0 0 1 1 1 1 N-terminal phage replisome organiser (Phage_rep_org_N) YfdX PF10938.8 gi|15920856|ref|NP_376525.1| - 0.00098 19.1 0.9 0.084 12.8 0.0 2.0 1 1 1 2 2 2 1 YfdX protein TrmB PF01978.19 gi|15920856|ref|NP_376525.1| - 0.0012 18.7 0.6 0.0021 17.9 0.5 1.5 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB DUF1495 PF07381.11 gi|15920856|ref|NP_376525.1| - 0.019 14.8 0.0 0.09 12.6 0.0 2.1 1 1 0 1 1 1 0 Winged helix DNA-binding domain (DUF1495) HTH_12 PF08461.10 gi|15920856|ref|NP_376525.1| - 0.022 14.7 0.4 0.063 13.2 0.4 1.9 1 1 0 1 1 1 0 Ribonuclease R winged-helix domain Replic_Relax PF13814.6 gi|15920856|ref|NP_376525.1| - 0.023 14.8 0.0 0.026 14.6 0.0 1.1 1 0 0 1 1 1 0 Replication-relaxation DUF2250 PF10007.9 gi|15920856|ref|NP_376525.1| - 0.027 14.6 1.2 0.097 12.8 0.4 1.9 1 1 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) DUF4423 PF14394.6 gi|15920856|ref|NP_376525.1| - 0.028 14.1 1.1 0.065 12.9 0.8 1.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4423) Penicillinase_R PF03965.16 gi|15920856|ref|NP_376525.1| - 0.046 14.1 0.3 0.071 13.5 0.3 1.5 1 1 0 1 1 1 0 Penicillinase repressor BORCS7 PF16088.5 gi|15920856|ref|NP_376525.1| - 0.049 13.9 0.1 0.065 13.5 0.1 1.1 1 0 0 1 1 1 0 BLOC-1-related complex sub-unit 7 HTH_20 PF12840.7 gi|15920856|ref|NP_376525.1| - 0.054 13.6 0.0 0.09 12.9 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Prefoldin_3 PF13758.6 gi|15920856|ref|NP_376525.1| - 0.078 13.0 2.2 0.24 11.5 0.2 2.0 1 1 0 2 2 2 0 Prefoldin subunit ISG65-75 PF11727.8 gi|15920856|ref|NP_376525.1| - 0.079 12.2 2.0 0.091 12.0 2.0 1.1 1 0 0 1 1 1 0 Invariant surface glycoprotein TLE_N PF03920.15 gi|15920856|ref|NP_376525.1| - 0.088 12.9 0.8 0.14 12.2 0.9 1.4 1 1 0 1 1 1 0 Groucho/TLE N-terminal Q-rich domain Prefoldin PF02996.17 gi|15920856|ref|NP_376525.1| - 0.094 12.6 4.0 3.3 7.7 0.3 2.1 2 0 0 2 2 2 0 Prefoldin subunit MarR_2 PF12802.7 gi|15920856|ref|NP_376525.1| - 0.17 11.8 0.0 0.37 10.7 0.0 1.6 1 1 0 1 1 1 0 MarR family ABC_tran_Xtn PF12848.7 gi|15920856|ref|NP_376525.1| - 0.69 10.0 5.2 0.27 11.3 2.0 1.9 1 1 1 2 2 2 0 ABC transporter YtxH PF12732.7 gi|15920856|ref|NP_376525.1| - 1.1 9.8 3.5 7.2 7.2 3.5 2.0 1 1 0 1 1 1 0 YtxH-like protein Na_H_Exchanger PF00999.21 gi|15920858|ref|NP_376527.1| - 6.8e-47 160.1 55.1 8.3e-47 159.8 55.1 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family Dioxygenase_N PF04444.14 gi|15920858|ref|NP_376527.1| - 0.16 11.9 0.0 0.38 10.6 0.0 1.6 1 0 0 1 1 1 0 Catechol dioxygenase N terminus Molybdopterin PF00384.22 gi|15920859|ref|NP_376528.1| - 1.9e-10 40.3 0.0 3e-09 36.4 0.0 2.0 1 1 0 1 1 1 1 Molybdopterin oxidoreductase Molydop_binding PF01568.21 gi|15920859|ref|NP_376528.1| - 0.014 15.4 0.0 0.49 10.4 0.0 3.0 3 1 0 3 3 3 0 Molydopterin dinucleotide binding domain SCO1-SenC PF02630.14 gi|15920859|ref|NP_376528.1| - 0.074 13.0 0.0 0.17 11.8 0.0 1.6 1 0 0 1 1 1 0 SCO1/SenC 7kD_DNA_binding PF02294.18 gi|15920860|ref|NP_376529.1| - 1.8e-41 140.0 3.7 2e-41 139.8 3.7 1.0 1 0 0 1 1 1 1 7kD DNA-binding domain Peptidase_M61 PF05299.12 gi|15920861|ref|NP_376530.1| - 1.7e-34 118.8 0.1 2.9e-34 118.0 0.1 1.4 1 0 0 1 1 1 1 M61 glycyl aminopeptidase Peptidase_M61_N PF17899.1 gi|15920861|ref|NP_376530.1| - 3.9e-10 40.0 0.6 1.9e-08 34.6 0.1 2.8 2 1 0 2 2 2 1 Peptidase M61 N-terminal domain PDZ_6 PF17820.1 gi|15920861|ref|NP_376530.1| - 7.8e-06 25.6 0.1 2.1e-05 24.2 0.1 1.7 1 0 0 1 1 1 1 PDZ domain PDZ_2 PF13180.6 gi|15920861|ref|NP_376530.1| - 0.00015 22.1 0.5 0.0014 19.0 0.5 2.3 1 1 0 1 1 1 1 PDZ domain PDZ PF00595.24 gi|15920861|ref|NP_376530.1| - 0.00047 20.5 0.2 0.0011 19.3 0.2 1.6 1 0 0 1 1 1 1 PDZ domain PaREP1 PF05942.11 gi|15920862|ref|NP_376531.1| - 1.9e-36 124.5 3.1 2.9e-36 123.9 3.1 1.3 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family FliS PF02561.14 gi|15920862|ref|NP_376531.1| - 0.013 15.8 2.5 0.014 15.6 0.4 1.9 2 0 0 2 2 2 0 Flagellar protein FliS HEPN PF05168.14 gi|15920862|ref|NP_376531.1| - 0.016 15.3 2.5 0.021 15.0 0.5 2.1 3 0 0 3 3 3 0 HEPN domain DUF357 PF04010.13 gi|15920862|ref|NP_376531.1| - 0.019 15.0 1.1 0.046 13.8 0.4 2.1 2 1 0 2 2 2 0 Protein of unknown function (DUF357) Mrr_cat_2 PF13156.6 gi|15920862|ref|NP_376531.1| - 0.023 14.6 0.0 0.035 14.0 0.0 1.4 1 0 0 1 1 1 0 Restriction endonuclease DUF3216 PF11505.8 gi|15920862|ref|NP_376531.1| - 0.04 14.1 2.1 0.28 11.4 0.0 2.3 2 1 0 2 2 2 0 Protein of unknown function (DUF3216) Leuk-A4-hydro_C PF09127.11 gi|15920862|ref|NP_376531.1| - 0.065 13.3 0.3 0.2 11.7 0.1 1.8 1 1 1 2 2 2 0 Leukotriene A4 hydrolase, C-terminal SinI PF08671.10 gi|15920862|ref|NP_376531.1| - 0.13 12.1 0.4 0.3 10.9 0.4 1.7 1 0 0 1 1 1 0 Anti-repressor SinI SQS_PSY PF00494.19 gi|15920862|ref|NP_376531.1| - 0.14 11.7 0.1 0.18 11.3 0.1 1.2 1 0 0 1 1 1 0 Squalene/phytoene synthase YtxH PF12732.7 gi|15920862|ref|NP_376531.1| - 0.8 10.3 4.3 13 6.4 4.3 2.8 1 1 0 1 1 1 0 YtxH-like protein Keratin PF02422.16 gi|15920863|ref|NP_376532.1| - 0.047 13.4 0.1 0.12 12.1 0.1 1.6 1 0 0 1 1 1 0 Keratin MFS_1 PF07690.16 gi|15920865|ref|NP_376534.1| - 1.1e-35 123.3 71.6 7.6e-31 107.3 40.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily AIM24 PF01987.17 gi|15920866|ref|NP_376535.1| - 6.9e-52 176.2 0.1 7.8e-52 176.0 0.1 1.0 1 0 0 1 1 1 1 Mitochondrial biogenesis AIM24 P5CR_dimer PF14748.6 gi|15920867|ref|NP_376536.1| - 1.7e-31 108.5 1.2 5.3e-31 106.9 0.4 2.0 2 0 0 2 2 2 1 Pyrroline-5-carboxylate reductase dimerisation F420_oxidored PF03807.17 gi|15920867|ref|NP_376536.1| - 1.5e-19 70.3 0.5 1.5e-19 70.3 0.5 1.9 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 gi|15920867|ref|NP_376536.1| - 3.7e-08 32.9 0.1 6.4e-08 32.2 0.1 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|15920867|ref|NP_376536.1| - 8.5e-08 32.3 2.5 1.6e-06 28.2 0.9 2.5 2 1 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_2 PF03446.15 gi|15920867|ref|NP_376536.1| - 5.1e-07 30.0 0.2 9.6e-07 29.1 0.2 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase PDH PF02153.17 gi|15920867|ref|NP_376536.1| - 5.6e-06 25.6 0.2 0.00011 21.3 0.1 2.5 1 1 1 3 3 3 1 Prephenate dehydrogenase DapB_N PF01113.20 gi|15920867|ref|NP_376536.1| - 6.3e-05 23.1 1.0 0.0032 17.6 0.3 2.4 1 1 1 2 2 2 1 Dihydrodipicolinate reductase, N-terminus ApbA PF02558.16 gi|15920867|ref|NP_376536.1| - 0.0001 22.0 0.5 0.00041 20.0 0.5 1.9 1 1 0 1 1 1 1 Ketopantoate reductase PanE/ApbA IlvN PF07991.12 gi|15920867|ref|NP_376536.1| - 0.00012 21.7 0.1 0.00019 21.1 0.1 1.3 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain Shikimate_DH PF01488.20 gi|15920867|ref|NP_376536.1| - 0.0026 17.8 0.2 0.0049 16.9 0.2 1.5 1 1 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase UDPG_MGDP_dh_N PF03721.14 gi|15920867|ref|NP_376536.1| - 0.0033 17.0 1.7 0.062 12.9 0.3 2.5 1 1 1 2 2 2 2 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain TrkA_N PF02254.18 gi|15920867|ref|NP_376536.1| - 0.017 15.4 0.2 0.046 14.0 0.2 1.8 1 0 0 1 1 1 0 TrkA-N domain ADH_zinc_N PF00107.26 gi|15920867|ref|NP_376536.1| - 0.02 14.9 0.0 0.034 14.1 0.0 1.6 1 1 0 1 1 1 0 Zinc-binding dehydrogenase Phage_holin_2_1 PF04971.12 gi|15920867|ref|NP_376536.1| - 0.022 14.8 0.0 0.049 13.6 0.0 1.5 1 0 0 1 1 1 0 Bacteriophage P21 holin S CoA_binding_2 PF13380.6 gi|15920867|ref|NP_376536.1| - 0.043 14.3 0.1 0.083 13.4 0.1 1.6 1 1 0 1 1 1 0 CoA binding domain Rossmann-like PF10727.9 gi|15920867|ref|NP_376536.1| - 0.052 13.4 0.1 0.1 12.5 0.1 1.5 1 0 0 1 1 1 0 Rossmann-like domain Sacchrp_dh_NADP PF03435.18 gi|15920867|ref|NP_376536.1| - 0.054 13.8 0.2 0.097 12.9 0.2 1.4 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain CTP_transf_like PF01467.26 gi|15920869|ref|NP_376538.1| - 1.7e-13 51.0 0.0 3.1e-13 50.1 0.0 1.5 1 1 0 1 1 1 1 Cytidylyltransferase-like HIGH_NTase1 PF05636.11 gi|15920869|ref|NP_376538.1| - 0.00023 20.5 0.0 0.33 10.1 0.0 2.2 2 0 0 2 2 2 2 HIGH Nucleotidyl Transferase Citrate_ly_lig PF08218.11 gi|15920869|ref|NP_376538.1| - 0.00094 18.9 0.1 0.83 9.3 0.0 2.2 2 0 0 2 2 2 2 Citrate lyase ligase C-terminal domain LigB PF02900.18 gi|15920869|ref|NP_376538.1| - 0.063 12.3 0.0 0.091 11.8 0.0 1.2 1 0 0 1 1 1 0 Catalytic LigB subunit of aromatic ring-opening dioxygenase FAD_binding_4 PF01565.23 gi|15920870|ref|NP_376539.1| - 4.1e-46 156.2 0.0 1.1e-45 154.8 0.0 1.7 2 0 0 2 2 2 1 FAD binding domain FAD-oxidase_C PF02913.19 gi|15920870|ref|NP_376539.1| - 1.2e-43 149.5 0.0 2.4e-43 148.6 0.0 1.4 2 0 0 2 2 2 1 FAD linked oxidases, C-terminal domain Pox_VLTF3 PF04947.14 gi|15920870|ref|NP_376539.1| - 0.058 13.1 0.1 0.18 11.6 0.1 1.9 1 1 0 1 1 1 0 Poxvirus Late Transcription Factor VLTF3 like Phage_Arf PF17585.2 gi|15920870|ref|NP_376539.1| - 0.085 12.8 0.9 0.14 12.1 0.0 1.8 2 0 0 2 2 2 0 Accessory recombination function protein PaREP1 PF05942.11 gi|15920871|ref|NP_376540.1| - 3.8e-07 30.0 0.4 8.2e-07 29.0 0.4 1.6 1 1 0 1 1 1 1 Archaeal PaREP1/PaREP8 family Colicin PF01024.19 gi|15920871|ref|NP_376540.1| - 0.001 19.0 0.2 0.0021 18.0 0.2 1.6 1 1 1 2 2 2 1 Colicin pore forming domain Aida_N PF08910.10 gi|15920871|ref|NP_376540.1| - 0.013 15.8 0.1 0.033 14.6 0.1 1.6 1 1 0 1 1 1 0 Aida N-terminus HEPN PF05168.14 gi|15920871|ref|NP_376540.1| - 0.092 12.9 0.7 1 9.5 0.7 2.2 1 1 0 1 1 1 0 HEPN domain SapB_1 PF05184.15 gi|15920871|ref|NP_376540.1| - 0.92 9.6 5.0 7.2 6.7 0.1 3.8 4 0 0 4 4 4 0 Saposin-like type B, region 1 Pyr_redox_2 PF07992.14 gi|15920872|ref|NP_376541.1| - 3.5e-21 75.7 0.0 6.1e-21 74.9 0.0 1.4 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|15920872|ref|NP_376541.1| - 8e-08 32.7 0.9 0.004 17.7 0.2 2.8 2 1 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|15920872|ref|NP_376541.1| - 0.00013 21.3 0.4 0.53 9.5 0.0 2.9 2 1 1 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|15920872|ref|NP_376541.1| - 0.00095 18.8 0.1 0.16 11.6 0.0 2.9 3 0 0 3 3 3 1 FAD dependent oxidoreductase Sacchrp_dh_NADP PF03435.18 gi|15920872|ref|NP_376541.1| - 0.0018 18.5 0.0 0.0034 17.7 0.0 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain NAD_binding_8 PF13450.6 gi|15920872|ref|NP_376541.1| - 0.011 15.9 0.1 0.025 14.8 0.1 1.6 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain ApbA PF02558.16 gi|15920872|ref|NP_376541.1| - 0.021 14.5 0.1 0.053 13.2 0.1 1.8 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA FAD_binding_2 PF00890.24 gi|15920872|ref|NP_376541.1| - 0.074 12.1 0.0 0.12 11.4 0.0 1.3 1 0 0 1 1 1 0 FAD binding domain TrkA_N PF02254.18 gi|15920872|ref|NP_376541.1| - 0.12 12.6 0.2 0.47 10.7 0.1 2.2 3 0 0 3 3 3 0 TrkA-N domain DUF2371 PF10177.9 gi|15920873|ref|NP_376542.1| - 0.029 14.6 0.4 0.055 13.7 0.4 1.4 1 0 0 1 1 1 0 Uncharacterised conserved protein (DUF2371) RNA_pol_Rpb2_4 PF04566.13 gi|15920875|ref|NP_376544.1| - 0.068 13.5 1.7 0.51 10.7 0.0 2.8 3 0 0 3 3 3 0 RNA polymerase Rpb2, domain 4 Lactamase_B PF00753.27 gi|15920876|ref|NP_376545.1| - 6.3e-09 36.1 0.4 1.1e-08 35.3 0.4 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|15920876|ref|NP_376545.1| - 1.1e-05 25.1 0.0 1.7e-05 24.5 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 gi|15920876|ref|NP_376545.1| - 0.017 14.5 0.0 0.031 13.7 0.0 1.4 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|15920876|ref|NP_376545.1| - 0.074 12.9 0.0 0.11 12.4 0.0 1.3 1 0 0 1 1 1 0 Beta-lactamase superfamily domain Csm1_B PF18211.1 gi|15920876|ref|NP_376545.1| - 0.083 12.7 0.1 0.62 9.9 0.0 2.2 1 1 1 2 2 2 0 Csm1 subunit domain B Amdase PF17645.1 gi|15920877|ref|NP_376546.1| - 1.9e-13 50.5 0.0 2.3e-13 50.3 0.0 1.1 1 0 0 1 1 1 1 Arylmalonate decarboxylase Asp_Glu_race PF01177.22 gi|15920877|ref|NP_376546.1| - 0.087 12.7 0.0 0.15 11.8 0.0 1.4 1 0 0 1 1 1 0 Asp/Glu/Hydantoin racemase HTH_45 PF14947.6 gi|15920879|ref|NP_376548.1| - 6.2e-29 99.8 4.5 7.5e-29 99.5 4.5 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix DUF4364 PF14277.6 gi|15920879|ref|NP_376548.1| - 0.00031 20.5 0.3 0.00035 20.4 0.3 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4364) DUF505 PF04458.12 gi|15920879|ref|NP_376548.1| - 0.043 12.2 1.6 0.046 12.1 1.6 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF505) Condensin2nSMC PF12422.8 gi|15920879|ref|NP_376548.1| - 0.083 13.1 0.1 0.093 12.9 0.1 1.1 1 0 0 1 1 1 0 Condensin II non structural maintenance of chromosomes subunit TNF PF00229.18 gi|15920879|ref|NP_376548.1| - 0.098 12.6 0.3 0.17 11.8 0.2 1.4 1 1 0 1 1 1 0 TNF(Tumour Necrosis Factor) family XdhC_C PF13478.6 gi|15920880|ref|NP_376549.1| - 3e-23 82.7 0.1 4e-23 82.3 0.1 1.1 1 0 0 1 1 1 1 XdhC Rossmann domain UDPG_MGDP_dh_C PF03720.15 gi|15920880|ref|NP_376549.1| - 0.089 13.2 0.0 0.2 12.1 0.0 1.6 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain zinc_ribbon_2 PF13240.6 gi|15920881|ref|NP_376550.1| - 1.9e-08 33.8 5.5 2.9e-08 33.2 5.5 1.3 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|15920881|ref|NP_376550.1| - 2.3e-06 27.5 1.4 3.2e-06 27.0 1.4 1.2 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|15920881|ref|NP_376550.1| - 2.8e-05 23.3 3.5 4.4e-05 22.7 3.5 1.3 1 0 0 1 1 1 1 zinc-ribbon domain zf-RanBP PF00641.18 gi|15920881|ref|NP_376550.1| - 0.0038 16.5 1.8 0.0055 16.0 1.8 1.2 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others zinc_ribbon_15 PF17032.5 gi|15920881|ref|NP_376550.1| - 0.02 15.6 0.2 0.029 15.1 0.2 1.2 1 0 0 1 1 1 0 zinc-ribbon family DNA_RNApol_7kD PF03604.13 gi|15920881|ref|NP_376550.1| - 0.06 13.0 0.6 0.5 10.1 0.0 2.1 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit zf-dskA_traR PF01258.17 gi|15920881|ref|NP_376550.1| - 0.15 12.0 2.0 1.7 8.7 0.1 2.2 2 0 0 2 2 2 0 Prokaryotic dksA/traR C4-type zinc finger zf-tcix PF14952.6 gi|15920881|ref|NP_376550.1| - 1.5 8.5 5.5 2.8 7.6 5.5 1.4 1 0 0 1 1 1 0 Putative treble-clef, zinc-finger, Zn-binding Nudix_N_2 PF14803.6 gi|15920881|ref|NP_376550.1| - 2.6 8.0 5.7 3.2 7.7 0.5 2.3 2 0 0 2 2 2 0 Nudix N-terminal RNA_POL_M_15KD PF02150.16 gi|15920881|ref|NP_376550.1| - 3.8 7.5 7.1 2.5 8.0 0.4 2.4 1 1 1 2 2 2 0 RNA polymerases M/15 Kd subunit zf-C4H2 PF10146.9 gi|15920881|ref|NP_376550.1| - 6.5 7.0 6.5 8.1 6.7 6.0 1.3 1 1 0 1 1 1 0 Zinc finger-containing protein Ammonium_transp PF00909.21 gi|15920882|ref|NP_376551.1| - 2.1e-91 306.6 26.1 2.5e-91 306.3 26.1 1.1 1 0 0 1 1 1 1 Ammonium Transporter Family DUF3188 PF11384.8 gi|15920882|ref|NP_376551.1| - 0.2 11.4 2.7 0.41 10.4 0.1 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3188) RNF111_N PF15303.6 gi|15920883|ref|NP_376552.1| - 0.011 15.5 1.2 0.011 15.5 1.2 1.0 1 0 0 1 1 1 0 E3 ubiquitin-protein ligase Arkadia N-terminus Ifi-6-16 PF06140.13 gi|15920883|ref|NP_376552.1| - 0.065 13.2 0.1 0.08 12.9 0.1 1.1 1 0 0 1 1 1 0 Interferon-induced 6-16 family NTP_transf_2 PF01909.23 gi|15920884|ref|NP_376553.1| - 4.5e-12 46.1 0.6 6.6e-12 45.6 0.6 1.2 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|15920884|ref|NP_376553.1| - 1.2e-08 34.9 0.1 1.5e-08 34.6 0.1 1.3 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase DNA_pol_B_palm PF14792.6 gi|15920884|ref|NP_376553.1| - 0.00046 20.4 0.0 0.0005 20.3 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase beta palm DUF294 PF03445.13 gi|15920884|ref|NP_376553.1| - 0.014 15.2 0.0 0.023 14.5 0.0 1.4 2 0 0 2 2 2 0 Putative nucleotidyltransferase DUF294 DUF1866 PF08952.11 gi|15920884|ref|NP_376553.1| - 0.035 14.0 0.0 0.045 13.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF1866) Radical_SAM_C PF16199.5 gi|15920884|ref|NP_376553.1| - 0.081 13.0 0.4 0.18 11.8 0.0 1.7 2 0 0 2 2 2 0 Radical_SAM C-terminal domain HEPN PF05168.14 gi|15920885|ref|NP_376554.1| - 1.6e-28 99.2 2.6 1.7e-28 99.1 2.6 1.0 1 0 0 1 1 1 1 HEPN domain DUF2225 PF09986.9 gi|15920885|ref|NP_376554.1| - 0.065 12.9 2.0 0.072 12.8 1.6 1.3 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2225) TPR_8 PF13181.6 gi|15920885|ref|NP_376554.1| - 0.074 13.3 2.2 0.24 11.7 0.1 2.8 4 0 0 4 4 4 0 Tetratricopeptide repeat TPR_1 PF00515.28 gi|15920885|ref|NP_376554.1| - 0.12 12.2 1.2 1.1 9.2 0.1 2.5 2 1 1 3 3 3 0 Tetratricopeptide repeat PmbA_TldD PF01523.16 gi|15920886|ref|NP_376555.1| - 1.4e-42 146.5 1.0 1.8e-42 146.2 1.0 1.1 1 0 0 1 1 1 1 Putative modulator of DNA gyrase PmbA_TldD PF01523.16 gi|15920887|ref|NP_376556.1| - 8e-28 98.1 0.7 1.1e-27 97.7 0.7 1.2 1 0 0 1 1 1 1 Putative modulator of DNA gyrase DUF1667 PF07892.11 gi|15920887|ref|NP_376556.1| - 0.12 12.4 0.2 0.36 10.9 0.2 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1667) MFS_1 PF07690.16 gi|15920888|ref|NP_376557.1| - 1.3e-54 185.4 43.1 1.3e-54 185.4 43.1 1.8 2 0 0 2 2 2 1 Major Facilitator Superfamily MFS_3 PF05977.13 gi|15920888|ref|NP_376557.1| - 0.00019 20.0 15.0 0.0023 16.4 6.6 2.5 2 0 0 2 2 2 2 Transmembrane secretion effector Amdase PF17645.1 gi|15920889|ref|NP_376558.1| - 2e-12 47.2 0.0 2.6e-12 46.9 0.0 1.1 1 0 0 1 1 1 1 Arylmalonate decarboxylase Asp_Glu_race PF01177.22 gi|15920889|ref|NP_376558.1| - 0.07 13.0 0.0 0.14 12.0 0.0 1.5 1 1 0 1 1 1 0 Asp/Glu/Hydantoin racemase YyzF PF14116.6 gi|15920890|ref|NP_376559.1| - 0.038 14.0 0.9 0.084 12.9 0.1 1.9 2 0 0 2 2 2 0 YyzF-like protein ATE_N PF04376.13 gi|15920890|ref|NP_376559.1| - 0.086 13.2 0.1 12 6.4 0.0 2.3 2 0 0 2 2 2 0 Arginine-tRNA-protein transferase, N terminus GDPD PF03009.17 gi|15920891|ref|NP_376560.1| - 4.7e-35 121.6 0.1 6.2e-34 117.9 0.1 2.0 1 1 0 1 1 1 1 Glycerophosphoryl diester phosphodiesterase family PI-PLC-X PF00388.19 gi|15920891|ref|NP_376560.1| - 0.0035 16.9 0.0 0.0054 16.3 0.0 1.3 1 0 0 1 1 1 1 Phosphatidylinositol-specific phospholipase C, X domain Cofilin_ADF PF00241.20 gi|15920891|ref|NP_376560.1| - 0.0065 16.3 0.1 0.013 15.3 0.1 1.7 1 1 0 1 1 1 1 Cofilin/tropomyosin-type actin-binding protein GDPD_2 PF13653.6 gi|15920891|ref|NP_376560.1| - 0.052 14.0 0.1 0.29 11.6 0.2 2.0 2 0 0 2 2 2 0 Glycerophosphoryl diester phosphodiesterase family Metallophos PF00149.28 gi|15920892|ref|NP_376561.1| - 1.4e-05 25.7 8.7 0.00033 21.2 8.7 2.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|15920892|ref|NP_376561.1| - 2.1e-05 24.8 2.0 0.0032 17.7 2.0 2.9 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos_3 PF14582.6 gi|15920892|ref|NP_376561.1| - 2.5e-05 23.7 2.4 0.00078 18.8 0.1 2.6 2 2 0 2 2 2 2 Metallophosphoesterase, calcineurin superfamily HTH_23 PF13384.6 gi|15920893|ref|NP_376562.1| - 4.7e-08 32.6 0.1 9.5e-08 31.6 0.1 1.6 1 0 0 1 1 1 1 Homeodomain-like domain Zn_Tnp_IS1 PF03811.13 gi|15920893|ref|NP_376562.1| - 2.3e-05 24.0 6.2 5e-05 22.9 6.2 1.5 1 0 0 1 1 1 1 InsA N-terminal domain HTH_28 PF13518.6 gi|15920893|ref|NP_376562.1| - 2.9e-05 24.1 0.0 7.1e-05 22.9 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain Terminase_5 PF06056.12 gi|15920893|ref|NP_376562.1| - 4.5e-05 23.2 0.1 9.8e-05 22.2 0.1 1.6 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) Sigma70_r4_2 PF08281.12 gi|15920893|ref|NP_376562.1| - 0.00024 20.7 0.0 0.00046 19.8 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_38 PF13936.6 gi|15920893|ref|NP_376562.1| - 0.00031 20.4 0.0 0.00074 19.2 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 gi|15920893|ref|NP_376562.1| - 0.002 17.5 0.0 0.0045 16.4 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 zf-ribbon_3 PF13248.6 gi|15920893|ref|NP_376562.1| - 0.0023 17.3 1.7 1.4 8.4 0.1 2.3 2 0 0 2 2 2 2 zinc-ribbon domain HTH_Tnp_1 PF01527.20 gi|15920893|ref|NP_376562.1| - 0.0058 16.9 0.1 0.013 15.8 0.1 1.6 1 0 0 1 1 1 1 Transposase HTH_Tnp_IS630 PF01710.16 gi|15920893|ref|NP_376562.1| - 0.0079 16.2 0.1 0.02 14.9 0.1 1.7 1 0 0 1 1 1 1 Transposase HTH_29 PF13551.6 gi|15920893|ref|NP_376562.1| - 0.01 15.8 0.0 0.02 14.9 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn helix Zn_Tnp_IS1595 PF12760.7 gi|15920893|ref|NP_376562.1| - 0.024 14.6 4.8 0.044 13.8 4.8 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain HTH_40 PF14493.6 gi|15920893|ref|NP_376562.1| - 0.036 14.5 0.0 0.077 13.5 0.0 1.5 2 0 0 2 2 1 0 Helix-turn-helix domain DUF1804 PF08822.11 gi|15920893|ref|NP_376562.1| - 0.064 13.2 0.2 0.25 11.3 0.2 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1804) OrfB_Zn_ribbon PF07282.11 gi|15920893|ref|NP_376562.1| - 0.065 13.2 1.2 0.16 11.9 1.2 1.6 1 0 0 1 1 1 0 Putative transposase DNA-binding domain HTH_Tnp_IS1 PF12759.7 gi|15920893|ref|NP_376562.1| - 0.088 12.4 0.0 0.15 11.7 0.0 1.4 1 0 0 1 1 1 0 InsA C-terminal domain GerE PF00196.19 gi|15920893|ref|NP_376562.1| - 0.12 12.0 0.0 0.22 11.1 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family Zn-ribbon_8 PF09723.10 gi|15920893|ref|NP_376562.1| - 0.22 11.7 3.8 2 8.6 0.4 2.5 2 0 0 2 2 2 0 Zinc ribbon domain Lar_restr_allev PF14354.6 gi|15920893|ref|NP_376562.1| - 0.74 10.2 4.6 0.28 11.6 0.9 2.1 2 0 0 2 2 2 0 Restriction alleviation protein Lar zf-ISL3 PF14690.6 gi|15920893|ref|NP_376562.1| - 0.76 10.5 6.1 22 5.8 2.0 2.8 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Nudix_N_2 PF14803.6 gi|15920893|ref|NP_376562.1| - 0.93 9.5 5.3 2 8.4 5.3 1.6 1 0 0 1 1 1 0 Nudix N-terminal Peptidase_S9 PF00326.21 gi|15920894|ref|NP_376563.1| - 2.6e-09 36.9 0.0 3.4e-09 36.5 0.0 1.1 1 0 0 1 1 1 1 Prolyl oligopeptidase family Hydrolase_4 PF12146.8 gi|15920894|ref|NP_376563.1| - 2.8e-06 26.8 0.3 0.00049 19.4 0.0 2.2 1 1 0 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_2 PF02230.16 gi|15920894|ref|NP_376563.1| - 0.00026 20.8 0.7 0.0015 18.4 0.1 2.1 1 1 0 2 2 2 1 Phospholipase/Carboxylesterase DLH PF01738.18 gi|15920894|ref|NP_376563.1| - 0.00074 19.1 0.0 0.0015 18.2 0.0 1.4 1 0 0 1 1 1 1 Dienelactone hydrolase family FSH1 PF03959.13 gi|15920894|ref|NP_376563.1| - 0.0052 16.5 0.4 0.024 14.3 0.4 1.9 1 1 0 1 1 1 1 Serine hydrolase (FSH1) BAAT_C PF08840.11 gi|15920894|ref|NP_376563.1| - 0.035 14.0 0.4 1.5 8.7 0.4 2.1 1 1 0 1 1 1 0 BAAT / Acyl-CoA thioester hydrolase C terminal Lipase_3 PF01764.25 gi|15920894|ref|NP_376563.1| - 0.065 13.1 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 Lipase (class 3) Abhydrolase_3 PF07859.13 gi|15920894|ref|NP_376563.1| - 0.076 12.9 0.1 0.39 10.5 0.1 1.9 1 1 0 1 1 1 0 alpha/beta hydrolase fold Abhydrolase_1 PF00561.20 gi|15920894|ref|NP_376563.1| - 0.12 12.1 0.2 4 7.0 0.0 2.1 1 1 1 2 2 2 0 alpha/beta hydrolase fold Abhydrolase_6 PF12697.7 gi|15920894|ref|NP_376563.1| - 0.12 12.9 0.0 2.4 8.7 0.1 2.1 1 1 1 2 2 2 0 Alpha/beta hydrolase family Esterase PF00756.20 gi|15920894|ref|NP_376563.1| - 0.14 11.7 0.0 0.2 11.2 0.0 1.2 1 0 0 1 1 1 0 Putative esterase 4HBT PF03061.22 gi|15920895|ref|NP_376564.1| - 1.8e-05 25.0 0.0 2.6e-05 24.5 0.0 1.2 1 0 0 1 1 1 1 Thioesterase superfamily DUF3834 PF12916.7 gi|15920896|ref|NP_376565.1| - 2.3e-67 226.2 1.2 2.7e-67 225.9 1.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3834) Lactamase_B PF00753.27 gi|15920897|ref|NP_376566.1| - 0.011 15.7 0.3 0.042 13.9 0.3 1.8 1 1 0 1 1 1 0 Metallo-beta-lactamase superfamily COX1 PF00115.20 gi|15920898|ref|NP_376567.1| - 5.4e-75 252.9 61.3 5.4e-75 252.9 61.3 1.6 1 1 1 2 2 2 2 Cytochrome C and Quinol oxidase polypeptide I Cas6b_C PF17262.2 gi|15920899|ref|NP_376568.1| - 0.066 13.3 0.0 0.13 12.4 0.0 1.4 1 0 0 1 1 1 0 Cas6b C-terminal domain OrfB_IS605 PF01385.19 gi|15920900|ref|NP_376569.1| - 5.9e-36 123.3 0.7 1e-35 122.6 0.7 1.4 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|15920900|ref|NP_376569.1| - 9.8e-20 70.3 0.4 2.8e-19 68.8 0.0 2.0 2 0 0 2 2 2 1 Putative transposase DNA-binding domain RuvX PF03652.15 gi|15920900|ref|NP_376569.1| - 0.0037 17.6 0.0 0.0072 16.7 0.0 1.5 1 0 0 1 1 1 1 Holliday junction resolvase Zn_Tnp_IS1595 PF12760.7 gi|15920900|ref|NP_376569.1| - 0.26 11.3 0.9 0.71 9.9 0.9 1.7 1 0 0 1 1 1 0 Transposase zinc-ribbon domain Y1_Tnp PF01797.16 gi|15920902|ref|NP_376571.1| - 2.2e-42 144.0 0.1 2.5e-42 143.8 0.1 1.0 1 0 0 1 1 1 1 Transposase IS200 like GAD PF02938.14 gi|15920902|ref|NP_376571.1| - 0.076 13.2 0.3 12 6.2 0.0 2.1 2 0 0 2 2 2 0 GAD domain DUF4883 PF16224.5 gi|15920903|ref|NP_376572.1| - 0.03 14.6 4.3 3.7 7.8 0.0 3.1 3 2 0 3 3 3 0 DOmain of unknown function (DUF4883) Pro_CA PF00484.19 gi|15920905|ref|NP_376574.1| - 9.4e-07 29.2 0.4 2.1e-05 24.9 0.3 2.5 2 1 0 2 2 2 1 Carbonic anhydrase Maelstrom PF13017.6 gi|15920905|ref|NP_376574.1| - 0.016 14.9 1.7 0.022 14.4 1.7 1.2 1 0 0 1 1 1 0 piRNA pathway germ-plasm component HTH_19 PF12844.7 gi|15920905|ref|NP_376574.1| - 0.027 14.5 0.3 0.06 13.4 0.3 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain Ald_deCOase PF11266.8 gi|15920905|ref|NP_376574.1| - 0.047 13.4 1.2 0.073 12.8 1.2 1.2 1 0 0 1 1 1 0 Long-chain fatty aldehyde decarbonylase LAMTOR PF15454.6 gi|15920905|ref|NP_376574.1| - 0.083 13.5 0.3 0.15 12.7 0.3 1.6 1 1 0 1 1 1 0 Late endosomal/lysosomal adaptor and MAPK and MTOR activator DUF4898 PF16239.5 gi|15920906|ref|NP_376575.1| - 0.00014 21.7 5.0 0.00021 21.1 5.0 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4898) FlaC_arch PF05377.11 gi|15920906|ref|NP_376575.1| - 0.05 14.0 0.7 0.14 12.6 0.1 1.9 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) HRDC PF00570.23 gi|15920906|ref|NP_376575.1| - 0.11 12.5 0.0 0.21 11.6 0.0 1.4 1 0 0 1 1 1 0 HRDC domain Methyltr_RsmB-F PF01189.17 gi|15920908|ref|NP_376577.1| - 1.2e-39 136.0 0.0 1.9e-39 135.4 0.0 1.3 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F Methyltransf_31 PF13847.6 gi|15920908|ref|NP_376577.1| - 1.6e-10 41.0 0.1 1.2e-09 38.1 0.0 2.3 2 1 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|15920908|ref|NP_376577.1| - 5.9e-07 30.1 0.0 3.5e-06 27.6 0.0 2.1 2 0 0 2 2 2 1 Methyltransferase domain PCMT PF01135.19 gi|15920908|ref|NP_376577.1| - 6.7e-06 26.0 0.1 2.6e-05 24.1 0.1 1.8 1 1 1 2 2 2 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_11 PF08241.12 gi|15920908|ref|NP_376577.1| - 0.00033 21.3 0.0 0.0024 18.5 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain GidB PF02527.15 gi|15920908|ref|NP_376577.1| - 0.00035 19.9 0.1 0.00056 19.3 0.1 1.3 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G Ubie_methyltran PF01209.18 gi|15920908|ref|NP_376577.1| - 0.00083 18.8 0.0 0.0017 17.8 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_18 PF12847.7 gi|15920908|ref|NP_376577.1| - 0.057 13.4 0.0 0.19 11.7 0.0 1.8 1 0 0 1 1 1 0 Methyltransferase domain SBF2 PF12335.8 gi|15920908|ref|NP_376577.1| - 0.08 12.5 0.2 0.16 11.5 0.2 1.5 1 0 0 1 1 1 0 Myotubularin protein GhoS PF11080.8 gi|15920908|ref|NP_376577.1| - 0.09 12.8 0.0 0.3 11.1 0.0 1.8 1 0 0 1 1 1 0 Endoribonuclease GhoS TENA_THI-4 PF03070.16 gi|15920909|ref|NP_376578.1| - 3.2e-26 92.4 2.0 4.9e-26 91.9 2.0 1.1 1 0 0 1 1 1 1 TENA/THI-4/PQQC family DUF2989 PF11207.8 gi|15920909|ref|NP_376578.1| - 0.031 14.0 0.6 0.55 10.0 0.0 2.3 2 1 1 3 3 3 0 Protein of unknown function (DUF2989) DUF929 PF06053.11 gi|15920910|ref|NP_376579.1| - 1.2e-63 214.7 13.9 1.5e-63 214.5 13.9 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF929) Pkinase PF00069.25 gi|15920911|ref|NP_376580.1| - 1.5e-34 119.6 0.0 2e-34 119.2 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 gi|15920911|ref|NP_376580.1| - 4e-14 52.5 0.0 8.2e-14 51.5 0.0 1.5 1 1 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 gi|15920911|ref|NP_376580.1| - 0.006 16.2 0.0 0.1 12.2 0.0 2.2 2 0 0 2 2 2 1 Kinetochore Sim4 complex subunit FTA2 Kdo PF06293.14 gi|15920911|ref|NP_376580.1| - 0.044 13.1 0.0 0.079 12.3 0.0 1.3 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family Pox_A9 PF04835.12 gi|15920911|ref|NP_376580.1| - 0.82 9.9 0.0 0.82 9.9 0.0 2.6 3 0 0 3 3 3 0 A9 protein conserved region Pyr_redox_2 PF07992.14 gi|15920912|ref|NP_376581.1| - 9.3e-54 182.6 0.0 1.3e-53 182.1 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|15920912|ref|NP_376581.1| - 4.4e-18 65.6 0.0 2.2e-16 60.0 0.0 2.3 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|15920912|ref|NP_376581.1| - 6.6e-17 61.8 0.1 1.3e-16 60.8 0.1 1.5 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 gi|15920912|ref|NP_376581.1| - 3.5e-11 43.5 2.0 5e-11 43.0 0.1 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|15920912|ref|NP_376581.1| - 2.1e-09 37.0 1.1 7.5e-06 25.3 0.1 3.4 3 1 0 3 3 3 2 Glucose inhibited division protein A K_oxygenase PF13434.6 gi|15920912|ref|NP_376581.1| - 1.8e-07 30.6 0.0 0.013 14.7 0.0 2.4 2 0 0 2 2 2 2 L-lysine 6-monooxygenase (NADPH-requiring) FAD_oxidored PF12831.7 gi|15920912|ref|NP_376581.1| - 4.5e-05 23.0 0.0 8.4e-05 22.1 0.0 1.5 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|15920912|ref|NP_376581.1| - 0.00054 19.2 0.2 0.002 17.3 0.1 1.9 2 0 0 2 2 2 1 FAD binding domain HI0933_like PF03486.14 gi|15920912|ref|NP_376581.1| - 0.0011 17.7 0.0 0.035 12.8 0.0 2.9 3 0 0 3 3 3 1 HI0933-like protein NAD_binding_8 PF13450.6 gi|15920912|ref|NP_376581.1| - 0.0094 16.2 1.5 0.012 15.8 0.1 2.0 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 gi|15920912|ref|NP_376581.1| - 0.046 13.0 0.1 0.12 11.6 0.0 1.7 2 0 0 2 2 2 0 Thi4 family Lycopene_cycl PF05834.12 gi|15920912|ref|NP_376581.1| - 0.075 12.1 0.0 0.23 10.5 0.0 1.8 3 0 0 3 3 3 0 Lycopene cyclase protein Minor_tail_Z PF06763.11 gi|15920912|ref|NP_376581.1| - 0.095 12.5 0.0 0.16 11.8 0.0 1.2 1 0 0 1 1 1 0 Prophage minor tail protein Z (GPZ) 3HCDH_N PF02737.18 gi|15920912|ref|NP_376581.1| - 0.1 12.5 0.0 0.99 9.3 0.0 2.2 2 0 0 2 2 2 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Methyltransf_25 PF13649.6 gi|15920913|ref|NP_376582.1| - 6.7e-09 36.3 0.0 1e-08 35.7 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|15920913|ref|NP_376582.1| - 6.6e-06 26.0 0.0 9e-06 25.6 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|15920913|ref|NP_376582.1| - 7.4e-05 23.4 0.0 0.00013 22.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_16 PF10294.9 gi|15920913|ref|NP_376582.1| - 0.0018 18.0 0.0 0.0028 17.4 0.0 1.4 1 0 0 1 1 1 1 Lysine methyltransferase Ubie_methyltran PF01209.18 gi|15920913|ref|NP_376582.1| - 0.045 13.1 0.0 0.053 12.9 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family PIN PF01850.21 gi|15920915|ref|NP_376584.1| - 0.051 14.1 0.0 0.053 14.0 0.0 1.0 1 0 0 1 1 1 0 PIN domain DUF5615 PF18480.1 gi|15920915|ref|NP_376584.1| - 0.069 12.9 0.0 0.077 12.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5615) RlaP PF10127.9 gi|15920916|ref|NP_376585.1| - 0.011 15.3 1.2 0.012 15.3 1.2 1.1 1 0 0 1 1 1 0 RNA repair pathway DNA polymerase beta family DUF2267 PF10025.9 gi|15920916|ref|NP_376585.1| - 0.058 13.7 0.1 0.074 13.3 0.1 1.1 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2267) DUF4535 PF15054.6 gi|15920916|ref|NP_376585.1| - 4.9 7.0 5.8 10 6.0 1.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF4535) HEPN PF05168.14 gi|15920917|ref|NP_376586.1| - 8.4e-34 116.2 0.0 1.1e-33 115.8 0.0 1.1 1 0 0 1 1 1 1 HEPN domain Polbeta PF18765.1 gi|15920918|ref|NP_376587.1| - 7.1e-11 42.0 0.0 1.4e-10 41.1 0.0 1.5 1 1 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase NTP_transf_2 PF01909.23 gi|15920918|ref|NP_376587.1| - 1e-09 38.5 0.1 1.4e-09 38.1 0.1 1.2 1 0 0 1 1 1 1 Nucleotidyltransferase domain Sugar_tr PF00083.24 gi|15920919|ref|NP_376588.1| - 1.9e-43 149.0 26.8 4.7e-43 147.7 26.8 1.5 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|15920919|ref|NP_376588.1| - 3.3e-22 78.9 23.1 3.3e-22 78.9 23.1 2.0 1 1 0 2 2 2 1 Major Facilitator Superfamily Radical_SAM_C PF16199.5 gi|15920920|ref|NP_376589.1| - 7.6e-28 96.4 0.4 1.4e-27 95.5 0.4 1.4 1 0 0 1 1 1 1 Radical_SAM C-terminal domain Radical_SAM PF04055.21 gi|15920920|ref|NP_376589.1| - 1.3e-22 80.9 0.0 2.5e-22 80.0 0.0 1.5 1 0 0 1 1 1 1 Radical SAM superfamily Acetyltransf_1 PF00583.25 gi|15920920|ref|NP_376589.1| - 9.5e-09 35.5 0.1 2e-08 34.5 0.1 1.6 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|15920920|ref|NP_376589.1| - 0.00037 20.4 0.0 0.0026 17.7 0.1 2.2 2 0 0 2 2 2 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|15920920|ref|NP_376589.1| - 0.026 15.0 0.0 0.054 13.9 0.0 1.6 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain HEPN PF05168.14 gi|15920921|ref|NP_376590.1| - 2.7e-22 79.1 0.8 2.9e-22 79.0 0.8 1.0 1 0 0 1 1 1 1 HEPN domain 2-Hacid_dh_C PF02826.19 gi|15920922|ref|NP_376591.1| - 1.5e-34 118.9 0.0 2.5e-34 118.2 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|15920922|ref|NP_376591.1| - 5.5e-14 52.0 0.0 6.7e-14 51.7 0.0 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AdoHcyase_NAD PF00670.21 gi|15920922|ref|NP_376591.1| - 0.00018 21.6 0.2 0.0005 20.2 0.1 1.9 1 1 1 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain ThiF PF00899.21 gi|15920922|ref|NP_376591.1| - 0.00032 20.2 0.3 0.0017 17.7 0.2 1.9 2 0 0 2 2 2 1 ThiF family PglD_N PF17836.1 gi|15920922|ref|NP_376591.1| - 0.026 15.1 1.1 0.076 13.7 1.0 1.9 1 1 0 1 1 1 0 PglD N-terminal domain Pyr_redox PF00070.27 gi|15920922|ref|NP_376591.1| - 0.042 14.4 0.1 0.52 10.9 0.0 2.3 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Shikimate_DH PF01488.20 gi|15920922|ref|NP_376591.1| - 0.14 12.2 0.2 0.75 9.9 0.2 2.1 1 1 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase AA_permease_2 PF13520.6 gi|15920923|ref|NP_376592.1| - 2.9e-16 59.3 62.2 3.5e-16 59.1 61.7 1.3 1 1 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|15920923|ref|NP_376592.1| - 2.6e-08 32.9 58.0 3.7e-08 32.4 58.0 1.2 1 0 0 1 1 1 1 Amino acid permease MJ1316 PF04457.12 gi|15920925|ref|NP_376594.1| - 1.2e-12 48.4 1.8 1.3e-12 48.3 1.8 1.0 1 0 0 1 1 1 1 MJ1316 RNA cyclic group end recognition domain YcxB PF14317.6 gi|15920925|ref|NP_376594.1| - 0.0086 15.8 0.2 0.073 12.8 0.2 2.2 1 1 0 1 1 1 1 YcxB-like protein PP-binding_2 PF14573.6 gi|15920925|ref|NP_376594.1| - 0.1 12.9 0.2 0.46 10.7 0.0 1.9 1 1 1 2 2 2 0 Acyl-carrier Nitroreductase PF00881.24 gi|15920926|ref|NP_376595.1| - 1.5e-25 90.2 0.4 2.1e-13 50.7 0.0 2.1 1 1 1 2 2 2 2 Nitroreductase family TM1586_NiRdase PF14512.6 gi|15920926|ref|NP_376595.1| - 3.1e-11 43.3 0.5 0.0029 17.2 0.0 3.1 2 1 1 3 3 3 3 Putative TM nitroreductase PPDK_N PF01326.19 gi|15920927|ref|NP_376596.1| - 7.7e-68 229.2 0.3 9.4e-68 228.9 0.3 1.0 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain GlcNAc-1_reg PF18440.1 gi|15920927|ref|NP_376596.1| - 0.023 14.9 0.3 0.073 13.3 0.4 1.8 2 0 0 2 2 2 0 Putative GlcNAc-1 phosphotransferase regulatory domain FeoB_Cyto PF17910.1 gi|15920927|ref|NP_376596.1| - 0.029 14.9 0.3 1.6 9.4 0.0 2.7 2 1 0 2 2 2 0 FeoB cytosolic helical domain Helicase_C PF00271.31 gi|15920927|ref|NP_376596.1| - 0.059 13.7 0.4 0.16 12.3 0.1 1.9 2 0 0 2 2 2 0 Helicase conserved C-terminal domain HTH_27 PF13463.6 gi|15920928|ref|NP_376597.1| - 1.1e-06 29.1 0.1 1.2e-06 28.9 0.1 1.0 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_11 PF08279.12 gi|15920928|ref|NP_376597.1| - 9.7e-06 25.4 0.4 1.4e-05 24.9 0.4 1.2 1 0 0 1 1 1 1 HTH domain MarR_2 PF12802.7 gi|15920928|ref|NP_376597.1| - 1.1e-05 25.2 0.0 1.3e-05 25.0 0.0 1.1 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|15920928|ref|NP_376597.1| - 1.6e-05 24.3 0.2 2.2e-05 23.9 0.2 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|15920928|ref|NP_376597.1| - 4.7e-05 23.2 0.1 6.2e-05 22.9 0.1 1.1 1 0 0 1 1 1 1 MarR family HTH_36 PF13730.6 gi|15920928|ref|NP_376597.1| - 0.00029 20.7 0.7 0.0029 17.5 0.7 2.0 1 1 0 1 1 1 1 Helix-turn-helix domain HxlR PF01638.17 gi|15920928|ref|NP_376597.1| - 0.00049 19.9 0.4 0.00059 19.6 0.4 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix TFIIE_alpha PF02002.17 gi|15920928|ref|NP_376597.1| - 0.00088 19.1 0.4 0.00099 18.9 0.4 1.1 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_micro PF17007.5 gi|15920928|ref|NP_376597.1| - 0.0013 17.7 0.2 0.0014 17.5 0.2 1.0 1 0 0 1 1 1 1 HTH-like HTH_20 PF12840.7 gi|15920928|ref|NP_376597.1| - 0.0019 18.2 0.0 0.0028 17.7 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_12 PF08461.10 gi|15920928|ref|NP_376597.1| - 0.0023 17.8 0.4 0.0031 17.4 0.4 1.4 1 1 0 1 1 1 1 Ribonuclease R winged-helix domain SMC_ScpB PF04079.16 gi|15920928|ref|NP_376597.1| - 0.003 17.2 0.2 0.0035 17.0 0.2 1.0 1 0 0 1 1 1 1 Segregation and condensation complex subunit ScpB HTH_5 PF01022.20 gi|15920928|ref|NP_376597.1| - 0.0037 17.1 0.3 0.0061 16.4 0.1 1.6 2 0 0 2 2 1 1 Bacterial regulatory protein, arsR family GntR PF00392.21 gi|15920928|ref|NP_376597.1| - 0.0042 16.7 0.1 0.0057 16.3 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_Mga PF08280.11 gi|15920928|ref|NP_376597.1| - 0.0042 17.1 0.2 0.006 16.6 0.2 1.4 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain MerR PF00376.23 gi|15920928|ref|NP_376597.1| - 0.0043 16.8 0.1 0.0093 15.7 0.1 1.7 1 1 0 1 1 1 1 MerR family regulatory protein HTH_DeoR PF08220.12 gi|15920928|ref|NP_376597.1| - 0.0074 16.0 0.1 0.012 15.4 0.1 1.3 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain Rrf2 PF02082.20 gi|15920928|ref|NP_376597.1| - 0.0099 16.2 0.1 0.019 15.3 0.1 1.5 1 1 1 2 2 2 1 Transcriptional regulator MerR_1 PF13411.6 gi|15920928|ref|NP_376597.1| - 0.015 15.3 0.1 0.025 14.6 0.1 1.6 1 1 0 1 1 1 0 MerR HTH family regulatory protein RNA_pol_Rpc34 PF05158.12 gi|15920928|ref|NP_376597.1| - 0.019 14.3 0.6 0.019 14.3 0.6 1.0 1 0 0 1 1 1 0 RNA polymerase Rpc34 subunit RepL PF05732.11 gi|15920928|ref|NP_376597.1| - 0.026 14.0 0.1 0.034 13.6 0.1 1.2 1 0 0 1 1 1 0 Firmicute plasmid replication protein (RepL) HTH_34 PF13601.6 gi|15920928|ref|NP_376597.1| - 0.035 14.3 0.1 0.04 14.1 0.1 1.1 1 0 0 1 1 1 0 Winged helix DNA-binding domain Rio2_N PF09202.11 gi|15920928|ref|NP_376597.1| - 0.045 14.0 0.1 0.058 13.6 0.1 1.4 1 1 0 1 1 1 0 Rio2, N-terminal RP-C PF03428.13 gi|15920928|ref|NP_376597.1| - 0.046 13.4 0.0 0.055 13.1 0.0 1.2 1 0 0 1 1 1 0 Replication protein C N-terminal domain HTH_IclR PF09339.10 gi|15920928|ref|NP_376597.1| - 0.05 13.4 0.1 1.3 8.8 0.0 2.1 1 1 1 2 2 2 0 IclR helix-turn-helix domain AbiEi_4 PF13338.6 gi|15920928|ref|NP_376597.1| - 0.056 13.6 0.0 0.091 12.9 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin HTH_43 PF09904.9 gi|15920928|ref|NP_376597.1| - 0.092 12.7 0.0 0.1 12.5 0.0 1.2 1 0 0 1 1 1 0 Winged helix-turn helix HTH_Crp_2 PF13545.6 gi|15920928|ref|NP_376597.1| - 0.096 12.7 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain AsnC_trans_reg PF01037.21 gi|15920928|ref|NP_376597.1| - 0.12 12.4 0.1 0.27 11.2 0.1 1.6 2 0 0 2 2 2 0 Lrp/AsnC ligand binding domain DUF373 PF04123.13 gi|15920929|ref|NP_376598.1| - 0.067 12.6 8.5 0.082 12.3 8.5 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF373) Bax1-I PF01027.20 gi|15920929|ref|NP_376598.1| - 0.099 12.5 13.4 0.082 12.7 11.1 1.9 1 1 1 2 2 2 0 Inhibitor of apoptosis-promoting Bax1 7tm_1 PF00001.21 gi|15920929|ref|NP_376598.1| - 0.29 10.4 3.6 0.4 10.0 3.6 1.3 1 0 0 1 1 1 0 7 transmembrane receptor (rhodopsin family) DUF2070 PF09843.9 gi|15920929|ref|NP_376598.1| - 0.55 8.5 15.7 0.63 8.3 15.7 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) EI24 PF07264.11 gi|15920929|ref|NP_376598.1| - 1.8 8.8 11.9 2.4 8.4 11.9 1.1 1 0 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) Claudin_2 PF13903.6 gi|15920929|ref|NP_376598.1| - 3.9 7.2 8.5 1.4 8.7 6.0 1.6 1 1 1 2 2 2 0 PMP-22/EMP/MP20/Claudin tight junction ABC_tran PF00005.27 gi|15920930|ref|NP_376599.1| - 1.7e-30 106.3 0.0 2.4e-30 105.9 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|15920930|ref|NP_376599.1| - 3.7e-16 59.4 0.1 6.3e-16 58.7 0.1 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|15920930|ref|NP_376599.1| - 0.00013 21.9 3.0 0.15 11.8 0.8 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|15920930|ref|NP_376599.1| - 0.0011 19.2 1.6 0.014 15.7 1.6 2.1 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|15920930|ref|NP_376599.1| - 0.0021 17.5 0.1 0.017 14.6 0.1 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|15920930|ref|NP_376599.1| - 0.0024 17.5 0.1 0.0041 16.8 0.1 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|15920930|ref|NP_376599.1| - 0.0069 16.8 0.0 0.011 16.2 0.0 1.4 1 0 0 1 1 1 1 AAA ATPase domain T2SSE PF00437.20 gi|15920930|ref|NP_376599.1| - 0.012 14.7 0.1 0.021 13.9 0.1 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein Mg_chelatase PF01078.21 gi|15920930|ref|NP_376599.1| - 0.012 15.1 0.0 0.024 14.0 0.0 1.5 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_15 PF13175.6 gi|15920930|ref|NP_376599.1| - 0.024 14.3 0.1 0.034 13.9 0.1 1.2 1 0 0 1 1 1 0 AAA ATPase domain NB-ARC PF00931.22 gi|15920930|ref|NP_376599.1| - 0.026 13.7 0.1 0.049 12.8 0.1 1.4 1 0 0 1 1 1 0 NB-ARC domain RsgA_GTPase PF03193.16 gi|15920930|ref|NP_376599.1| - 0.033 14.1 0.1 0.061 13.2 0.1 1.4 1 0 0 1 1 1 0 RsgA GTPase NACHT PF05729.12 gi|15920930|ref|NP_376599.1| - 0.089 12.7 0.4 0.15 12.0 0.4 1.4 1 0 0 1 1 1 0 NACHT domain ATPase PF06745.13 gi|15920930|ref|NP_376599.1| - 0.098 12.0 0.3 0.37 10.1 0.1 1.9 2 0 0 2 2 2 0 KaiC AAA_23 PF13476.6 gi|15920930|ref|NP_376599.1| - 0.11 13.0 0.3 0.22 12.0 0.0 1.5 2 0 0 2 2 2 0 AAA domain TsaE PF02367.17 gi|15920930|ref|NP_376599.1| - 0.12 12.4 0.0 0.22 11.5 0.0 1.3 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_24 PF13479.6 gi|15920930|ref|NP_376599.1| - 0.21 11.3 0.4 0.31 10.7 0.4 1.2 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 gi|15920931|ref|NP_376600.1| - 6e-29 101.3 0.0 8.7e-29 100.8 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|15920931|ref|NP_376600.1| - 1.6e-24 86.2 0.1 2.8e-24 85.4 0.1 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|15920931|ref|NP_376600.1| - 1.2e-06 28.6 3.2 8.6e-05 22.5 0.3 2.2 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|15920931|ref|NP_376600.1| - 4.8e-05 22.9 2.0 0.0035 16.8 2.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|15920931|ref|NP_376600.1| - 0.00015 21.5 0.0 0.00028 20.6 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|15920931|ref|NP_376600.1| - 0.00036 20.8 0.6 0.0056 17.0 0.6 2.1 1 1 0 1 1 1 1 AAA domain TniB PF05621.11 gi|15920931|ref|NP_376600.1| - 0.0007 19.1 1.0 0.088 12.2 0.3 2.3 2 0 0 2 2 2 1 Bacterial TniB protein AAA_23 PF13476.6 gi|15920931|ref|NP_376600.1| - 0.00083 19.9 0.1 0.0014 19.2 0.1 1.5 1 1 0 1 1 1 1 AAA domain PRK PF00485.18 gi|15920931|ref|NP_376600.1| - 0.0015 18.3 0.2 0.0032 17.3 0.2 1.7 1 1 0 1 1 1 1 Phosphoribulokinase / Uridine kinase family AAA_16 PF13191.6 gi|15920931|ref|NP_376600.1| - 0.002 18.5 0.0 0.0039 17.6 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain DUF87 PF01935.17 gi|15920931|ref|NP_376600.1| - 0.0068 16.5 0.9 0.15 12.1 0.3 2.2 1 1 1 2 2 2 1 Helicase HerA, central domain NB-ARC PF00931.22 gi|15920931|ref|NP_376600.1| - 0.0074 15.5 0.1 0.016 14.4 0.1 1.5 1 0 0 1 1 1 1 NB-ARC domain KAP_NTPase PF07693.14 gi|15920931|ref|NP_376600.1| - 0.016 14.4 0.0 0.045 13.0 0.0 1.6 1 1 1 2 2 2 0 KAP family P-loop domain AAA_15 PF13175.6 gi|15920931|ref|NP_376600.1| - 0.019 14.7 0.4 0.029 14.1 0.4 1.4 1 0 0 1 1 1 0 AAA ATPase domain NTPase_1 PF03266.15 gi|15920931|ref|NP_376600.1| - 0.039 13.9 0.4 0.089 12.7 0.1 1.9 2 0 0 2 2 2 0 NTPase NACHT PF05729.12 gi|15920931|ref|NP_376600.1| - 0.057 13.3 0.5 0.13 12.2 0.1 1.7 2 0 0 2 2 2 0 NACHT domain RsgA_GTPase PF03193.16 gi|15920931|ref|NP_376600.1| - 0.059 13.3 0.0 0.12 12.3 0.0 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA_5 PF07728.14 gi|15920931|ref|NP_376600.1| - 0.074 13.0 0.0 0.18 11.8 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) ATPase PF06745.13 gi|15920931|ref|NP_376600.1| - 0.074 12.4 0.1 0.16 11.3 0.1 1.5 1 0 0 1 1 1 0 KaiC MeaB PF03308.16 gi|15920931|ref|NP_376600.1| - 0.083 11.9 0.0 0.14 11.1 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB MMR_HSR1 PF01926.23 gi|15920931|ref|NP_376600.1| - 0.091 12.8 0.0 0.17 11.9 0.0 1.6 1 0 0 1 1 1 0 50S ribosome-binding GTPase ATP-synt_ab PF00006.25 gi|15920931|ref|NP_376600.1| - 0.12 12.1 0.1 0.27 10.9 0.1 1.4 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain Sigma54_activat PF00158.26 gi|15920931|ref|NP_376600.1| - 0.12 12.0 0.0 0.24 11.1 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_7 PF12775.7 gi|15920931|ref|NP_376600.1| - 0.16 11.5 0.0 0.28 10.7 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region Gal11_ABD1 PF18535.1 gi|15920931|ref|NP_376600.1| - 0.96 9.6 3.3 43 4.3 0.0 3.2 2 1 1 3 3 3 0 Gal11 activator-binding domain (ABD1) BPD_transp_1 PF00528.22 gi|15920932|ref|NP_376601.1| - 1.5e-17 63.9 15.8 1.5e-17 63.9 15.8 2.3 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|15920932|ref|NP_376601.1| - 0.00098 19.0 1.0 0.00098 19.0 1.0 3.3 4 0 0 4 4 4 1 N-terminal TM domain of oligopeptide transport permease C BPD_transp_1 PF00528.22 gi|15920933|ref|NP_376602.1| - 5.4e-31 107.8 17.1 5.4e-31 107.8 17.1 2.2 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_5 PF00496.22 gi|15920935|ref|NP_376604.1| - 1.1e-25 90.4 14.0 2.5e-14 53.0 2.0 2.3 2 0 0 2 2 2 2 Bacterial extracellular solute-binding proteins, family 5 Middle RIFIN PF02009.16 gi|15920935|ref|NP_376604.1| - 0.0057 16.6 2.6 0.0081 16.1 2.6 1.2 1 0 0 1 1 1 1 Rifin DUF5305 PF17231.2 gi|15920935|ref|NP_376604.1| - 0.08 12.3 3.3 0.15 11.4 3.3 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5305) Stevor PF17410.2 gi|15920935|ref|NP_376604.1| - 0.32 10.5 2.3 0.58 9.7 2.3 1.4 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame TMEM154 PF15102.6 gi|15920935|ref|NP_376604.1| - 0.7 9.8 4.5 1.6 8.6 4.5 1.6 1 0 0 1 1 1 0 TMEM154 protein family MFS_1 PF07690.16 gi|15920936|ref|NP_376605.1| - 8e-37 127.0 63.1 5.2e-25 88.1 27.5 3.4 1 1 2 3 3 3 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|15920936|ref|NP_376605.1| - 9.5e-06 24.7 16.4 9.5e-06 24.7 16.4 3.3 4 0 0 4 4 4 2 Sugar (and other) transporter DUF1129 PF06570.11 gi|15920936|ref|NP_376605.1| - 3.6 7.0 11.3 0.11 12.0 3.0 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF1129) Kinocilin PF15033.6 gi|15920936|ref|NP_376605.1| - 5.9 6.6 8.8 0.16 11.6 0.8 2.4 2 0 0 2 2 2 0 Kinocilin protein zinc_ribbon_2 PF13240.6 gi|15920937|ref|NP_376606.1| - 1.9e-06 27.4 2.6 2.7e-06 26.9 2.6 1.3 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|15920937|ref|NP_376606.1| - 9.5e-05 22.3 0.3 0.00012 22.0 0.3 1.2 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_15 PF17032.5 gi|15920937|ref|NP_376606.1| - 0.0062 17.3 0.1 0.0083 16.9 0.1 1.3 1 0 0 1 1 1 1 zinc-ribbon family UPF0547 PF10571.9 gi|15920937|ref|NP_376606.1| - 0.065 13.3 2.6 3 8.0 0.2 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-RanBP PF00641.18 gi|15920937|ref|NP_376606.1| - 0.089 12.1 1.9 0.14 11.5 1.9 1.2 1 0 0 1 1 1 0 Zn-finger in Ran binding protein and others zf-ribbon_3 PF13248.6 gi|15920937|ref|NP_376606.1| - 0.18 11.3 4.4 2.1 7.9 4.4 2.2 1 1 0 1 1 1 0 zinc-ribbon domain Nudix_N_2 PF14803.6 gi|15920937|ref|NP_376606.1| - 0.37 10.7 3.1 1.7 8.6 0.2 2.3 2 0 0 2 2 2 0 Nudix N-terminal zf-tcix PF14952.6 gi|15920937|ref|NP_376606.1| - 0.61 9.8 4.5 1 9.0 4.5 1.3 1 0 0 1 1 1 0 Putative treble-clef, zinc-finger, Zn-binding RNA_POL_M_15KD PF02150.16 gi|15920937|ref|NP_376606.1| - 1.2 9.1 5.9 1.2 9.1 0.1 2.3 1 1 1 2 2 2 0 RNA polymerases M/15 Kd subunit Ribosomal_L13e PF01294.18 gi|15920938|ref|NP_376607.1| - 3.2e-12 46.7 0.5 3.4e-12 46.6 0.5 1.1 1 0 0 1 1 1 1 Ribosomal protein L13e Asp_protease_2 PF13650.6 gi|15920939|ref|NP_376608.1| - 0.058 14.1 0.0 0.082 13.6 0.0 1.3 1 1 0 1 1 1 0 Aspartyl protease PhoQ_Sensor PF08918.10 gi|15920940|ref|NP_376609.1| - 0.018 14.9 0.0 4.3 7.1 0.0 2.3 1 1 0 2 2 2 0 PhoQ Sensor PAD PF03068.15 gi|15920940|ref|NP_376609.1| - 0.06 12.3 0.0 6.4 5.7 0.0 2.0 2 0 0 2 2 2 0 Protein-arginine deiminase (PAD) DUF3659 PF12396.8 gi|15920940|ref|NP_376609.1| - 0.093 12.7 0.1 4.1 7.4 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF3659) PulA_N1 PF17999.1 gi|15920940|ref|NP_376609.1| - 0.41 11.4 2.7 93 3.9 0.0 3.7 3 1 1 4 4 4 0 Pullulanase N1-terminal domain Frizzled PF01534.17 gi|15920941|ref|NP_376610.1| - 0.14 11.2 2.7 3.1 6.7 2.7 2.0 1 1 0 1 1 1 0 Frizzled/Smoothened family membrane region TetR_C_8 PF14278.6 gi|15920941|ref|NP_376610.1| - 0.31 11.2 4.8 0.28 11.3 0.6 2.2 1 1 1 2 2 2 0 Transcriptional regulator C-terminal region Sugar_tr PF00083.24 gi|15920943|ref|NP_376612.1| - 1.4e-45 156.0 23.5 2e-44 152.2 23.5 2.9 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|15920943|ref|NP_376612.1| - 3.4e-37 128.2 85.8 1.5e-30 106.3 48.9 2.6 1 1 1 2 2 2 2 Major Facilitator Superfamily OATP PF03137.20 gi|15920943|ref|NP_376612.1| - 9.3e-06 24.2 4.5 9.3e-06 24.2 4.5 3.5 3 1 1 4 4 4 3 Organic Anion Transporter Polypeptide (OATP) family MFS_4 PF06779.14 gi|15920943|ref|NP_376612.1| - 0.00038 19.9 5.5 0.00038 19.9 5.5 2.8 2 2 0 2 2 2 2 Uncharacterised MFS-type transporter YbfB MFS_1_like PF12832.7 gi|15920943|ref|NP_376612.1| - 0.022 13.7 23.4 0.19 10.6 7.2 3.1 2 1 0 2 2 2 0 MFS_1 like family ADC PF06314.11 gi|15920944|ref|NP_376613.1| - 2.1e-58 197.7 0.0 2.5e-58 197.4 0.0 1.0 1 0 0 1 1 1 1 Acetoacetate decarboxylase (ADC) DDE_Tnp_2 PF04693.12 gi|15920945|ref|NP_376614.1| - 3.7e-52 177.6 2.4 1.2e-34 120.1 0.9 2.1 2 0 0 2 2 2 2 Archaeal putative transposase ISC1217 Lipocalin_3 PF12702.7 gi|15920945|ref|NP_376614.1| - 0.026 14.6 0.9 0.096 12.8 0.0 2.3 2 1 0 2 2 2 0 Lipocalin-like Tim44 PF04280.15 gi|15920945|ref|NP_376614.1| - 0.078 13.1 0.2 0.23 11.5 0.1 1.8 1 1 1 2 2 2 0 Tim44-like domain Pyr_redox PF00070.27 gi|15920945|ref|NP_376614.1| - 0.13 12.8 0.7 0.27 11.8 0.1 1.8 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase B-block_TFIIIC PF04182.12 gi|15920945|ref|NP_376614.1| - 0.16 12.1 6.9 1.3 9.2 0.2 2.9 2 1 0 2 2 2 0 B-block binding subunit of TFIIIC MDM31_MDM32 PF08118.11 gi|15920945|ref|NP_376614.1| - 0.28 9.8 6.9 0.31 9.7 6.4 1.3 1 1 0 1 1 1 0 Yeast mitochondrial distribution and morphology (MDM) proteins DDE_Tnp_2 PF04693.12 gi|15920946|ref|NP_376615.1| - 8.9e-60 202.6 0.1 1.1e-59 202.4 0.1 1.1 1 0 0 1 1 1 1 Archaeal putative transposase ISC1217 DDE_Tnp_1 PF01609.21 gi|15920946|ref|NP_376615.1| - 0.00012 21.9 0.1 0.00014 21.5 0.1 1.2 1 0 0 1 1 1 1 Transposase DDE domain PaREP1 PF05942.11 gi|15920947|ref|NP_376616.1| - 1.9e-28 98.7 0.3 2.3e-28 98.4 0.3 1.1 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family HEPN PF05168.14 gi|15920947|ref|NP_376616.1| - 0.04 14.0 2.5 0.06 13.5 1.0 1.8 2 0 0 2 2 2 0 HEPN domain Rieske PF00355.26 gi|15920948|ref|NP_376617.1| - 4.1e-14 52.3 0.0 4.7e-14 52.1 0.0 1.1 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 gi|15920948|ref|NP_376617.1| - 2e-10 40.5 0.0 2.3e-10 40.3 0.0 1.1 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain PQQ_3 PF13570.6 gi|15920948|ref|NP_376617.1| - 0.041 14.4 0.0 0.069 13.7 0.0 1.4 1 0 0 1 1 1 0 PQQ-like domain PQQ PF01011.21 gi|15920948|ref|NP_376617.1| - 0.045 13.7 0.0 1.6 8.8 0.2 2.5 2 0 0 2 2 2 0 PQQ enzyme repeat YajC PF02699.15 gi|15920948|ref|NP_376617.1| - 0.15 11.9 0.0 0.19 11.6 0.0 1.2 1 0 0 1 1 1 0 Preprotein translocase subunit MFS_1 PF07690.16 gi|15920949|ref|NP_376618.1| - 0.0026 16.7 14.0 0.003 16.5 14.0 1.0 1 0 0 1 1 1 1 Major Facilitator Superfamily PUCC PF03209.15 gi|15920949|ref|NP_376618.1| - 0.043 12.8 5.6 0.064 12.3 5.6 1.3 1 1 0 1 1 1 0 PUCC protein HTH_20 PF12840.7 gi|15920950|ref|NP_376619.1| - 2.7e-08 33.8 0.0 4.9e-08 32.9 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain DUF4097 PF13349.6 gi|15920950|ref|NP_376619.1| - 5e-06 26.1 3.3 5e-06 26.1 3.3 1.5 2 0 0 2 2 2 1 Putative adhesin HTH_5 PF01022.20 gi|15920950|ref|NP_376619.1| - 0.00012 21.9 0.2 0.00036 20.3 0.2 1.9 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_45 PF14947.6 gi|15920950|ref|NP_376619.1| - 0.0011 18.9 0.5 0.0062 16.5 0.1 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DUF2154 PF09922.9 gi|15920950|ref|NP_376619.1| - 0.004 17.0 2.1 0.9 9.4 0.0 2.8 2 1 1 3 3 3 2 Cell wall-active antibiotics response 4TMS YvqF Mrr_N PF14338.6 gi|15920950|ref|NP_376619.1| - 0.02 15.0 0.1 0.076 13.2 0.0 2.0 2 0 0 2 2 2 0 Mrr N-terminal domain HTH_12 PF08461.10 gi|15920950|ref|NP_376619.1| - 0.047 13.7 0.0 0.14 12.1 0.0 1.8 2 0 0 2 2 2 0 Ribonuclease R winged-helix domain DUF505 PF04458.12 gi|15920950|ref|NP_376619.1| - 0.058 11.7 0.4 0.079 11.3 0.4 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF505) AhpC-TSA PF00578.21 gi|15920951|ref|NP_376620.1| - 1.4e-35 121.9 0.0 1.8e-35 121.6 0.0 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|15920951|ref|NP_376620.1| - 4.9e-21 75.0 0.0 5.6e-21 74.8 0.0 1.0 1 0 0 1 1 1 1 Redoxin AhpC-TSA_2 PF13911.6 gi|15920951|ref|NP_376620.1| - 0.01 15.9 0.0 0.014 15.5 0.0 1.2 1 0 0 1 1 1 0 AhpC/TSA antioxidant enzyme DUF899 PF05988.12 gi|15920951|ref|NP_376620.1| - 0.085 12.4 0.0 0.1 12.1 0.0 1.1 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF899) HTH_10 PF04967.12 gi|15920952|ref|NP_376621.1| - 7e-21 73.8 0.7 1.1e-20 73.1 0.1 1.7 2 0 0 2 2 2 1 HTH DNA binding domain GerE PF00196.19 gi|15920952|ref|NP_376621.1| - 0.007 15.9 0.1 0.025 14.1 0.1 1.9 2 0 0 2 2 2 1 Bacterial regulatory proteins, luxR family HTH_40 PF14493.6 gi|15920952|ref|NP_376621.1| - 0.12 12.8 0.1 6.6 7.3 0.0 2.4 2 1 0 2 2 2 0 Helix-turn-helix domain Flavin_Reduct PF01613.18 gi|15920953|ref|NP_376622.1| - 3.1e-28 98.8 0.0 3.5e-28 98.6 0.0 1.0 1 0 0 1 1 1 1 Flavin reductase like domain DUF447 PF04289.12 gi|15920953|ref|NP_376622.1| - 0.0015 18.3 0.0 0.0021 17.9 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF447) Glyoxalase PF00903.25 gi|15920954|ref|NP_376623.1| - 2.9e-23 82.5 2.1 9.4e-11 42.0 0.0 2.1 2 0 0 2 2 2 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily Glyoxalase_4 PF13669.6 gi|15920954|ref|NP_376623.1| - 2.2e-09 37.5 0.5 0.0024 18.1 0.2 3.5 2 2 1 3 3 3 2 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily HpaB_N PF11794.8 gi|15920956|ref|NP_376625.1| - 1.7e-87 293.6 0.0 2.6e-87 293.0 0.0 1.2 1 0 0 1 1 1 1 4-hydroxyphenylacetate 3-hydroxylase N terminal HpaB PF03241.13 gi|15920956|ref|NP_376625.1| - 9.4e-50 168.5 0.1 2.3e-49 167.3 0.0 1.6 2 0 0 2 2 2 1 4-hydroxyphenylacetate 3-hydroxylase C terminal PAS_3 PF08447.12 gi|15920956|ref|NP_376625.1| - 0.029 14.7 0.0 0.07 13.4 0.0 1.6 1 0 0 1 1 1 0 PAS fold DUF4221 PF13970.6 gi|15920956|ref|NP_376625.1| - 0.13 11.9 0.3 0.2 11.2 0.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4221) FAA_hydrolase PF01557.18 gi|15920957|ref|NP_376626.1| - 1.4e-35 123.0 0.0 1.6e-35 122.7 0.0 1.0 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family Na_H_Exchanger PF00999.21 gi|15920958|ref|NP_376627.1| - 3.6e-45 154.4 49.9 4.9e-45 154.0 49.9 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family AMP-binding PF00501.28 gi|15920959|ref|NP_376628.1| - 8.1e-90 301.4 0.0 9.7e-90 301.2 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|15920959|ref|NP_376628.1| - 1.7e-27 96.2 1.1 5.3e-27 94.6 0.3 2.2 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain ACAS_N PF16177.5 gi|15920959|ref|NP_376628.1| - 6.8e-22 77.1 1.0 1.5e-21 76.1 1.0 1.6 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus Gpr1_Fun34_YaaH PF01184.19 gi|15920960|ref|NP_376629.1| - 1.4e-17 64.0 19.5 4e-17 62.5 19.5 1.6 1 1 0 1 1 1 1 GPR1/FUN34/yaaH family DUF202 PF02656.15 gi|15920960|ref|NP_376629.1| - 3.3 8.2 10.1 0.89 10.0 3.2 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF202) TPP_enzyme_C PF02775.21 gi|15920962|ref|NP_376631.1| - 3.2e-23 82.2 0.0 6.6e-23 81.2 0.0 1.6 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain POR_N PF01855.19 gi|15920962|ref|NP_376631.1| - 2.4e-14 53.7 0.0 2.4e-13 50.4 0.0 2.0 2 0 0 2 2 2 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg Fer4 PF00037.27 gi|15920962|ref|NP_376631.1| - 1e-08 34.6 17.0 1.7e-07 30.7 7.1 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|15920962|ref|NP_376631.1| - 2.4e-07 31.2 5.3 7.2e-05 23.3 0.4 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15920962|ref|NP_376631.1| - 3.2e-07 30.1 23.1 1.2e-05 25.1 5.8 2.7 3 0 0 3 3 3 2 4Fe-4S binding domain TPP_enzyme_N PF02776.18 gi|15920962|ref|NP_376631.1| - 5.7e-07 29.3 0.1 0.00082 19.0 0.0 2.3 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Fer4_9 PF13187.6 gi|15920962|ref|NP_376631.1| - 5.5e-06 26.4 9.3 1.2e-05 25.4 9.3 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15920962|ref|NP_376631.1| - 5.1e-05 24.1 6.5 0.00096 20.0 0.8 2.6 2 0 0 2 2 2 1 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|15920962|ref|NP_376631.1| - 7.5e-05 22.8 11.2 0.003 17.7 1.8 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|15920962|ref|NP_376631.1| - 0.00032 21.2 3.7 0.064 13.8 0.4 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15920962|ref|NP_376631.1| - 0.00036 20.4 17.4 0.015 15.4 2.4 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|15920962|ref|NP_376631.1| - 0.00049 20.2 12.6 0.042 14.0 2.6 2.3 1 1 0 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|15920962|ref|NP_376631.1| - 0.0067 16.9 4.9 0.55 10.7 0.6 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15920962|ref|NP_376631.1| - 0.012 16.0 3.1 0.012 16.0 3.1 2.6 1 1 1 2 2 2 0 4Fe-4S binding domain Fer4_3 PF12798.7 gi|15920962|ref|NP_376631.1| - 0.016 16.1 4.8 0.016 16.1 4.8 2.5 2 0 0 2 2 1 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|15920962|ref|NP_376631.1| - 0.042 14.7 3.5 1.1 10.1 0.5 2.5 2 0 0 2 2 2 0 4Fe-4S dicluster domain Beta_protein PF14350.6 gi|15920962|ref|NP_376631.1| - 0.18 11.2 0.0 0.29 10.5 0.0 1.2 1 0 0 1 1 1 0 Beta protein Fer4_13 PF13370.6 gi|15920962|ref|NP_376631.1| - 3.2 8.4 14.7 7.1 7.3 3.8 2.7 1 1 1 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_15 PF13459.6 gi|15920962|ref|NP_376631.1| - 4.8 8.0 13.2 3 8.6 1.6 3.1 2 1 1 3 3 3 0 4Fe-4S single cluster domain POR PF01558.18 gi|15920963|ref|NP_376632.1| - 1.9e-29 103.0 0.1 2.3e-29 102.7 0.1 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase MciZ PF13072.6 gi|15920963|ref|NP_376632.1| - 0.23 11.3 0.7 3.8 7.4 0.7 2.2 2 0 0 2 2 2 0 Mother cell inhibitor of FtsZ Aminotran_3 PF00202.21 gi|15920964|ref|NP_376633.1| - 5.2e-106 354.7 0.0 6e-106 354.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III DUF5442 PF17514.2 gi|15920966|ref|NP_376635.1| - 0.0073 16.5 0.4 0.011 15.9 0.4 1.4 1 0 0 1 1 1 1 Family of unknown function (DUF5442) Ribosomal_S8 PF00410.19 gi|15920966|ref|NP_376635.1| - 0.014 15.3 0.1 0.016 15.1 0.1 1.1 1 0 0 1 1 1 0 Ribosomal protein S8 RRM_1 PF00076.22 gi|15920966|ref|NP_376635.1| - 0.023 14.5 0.1 0.033 14.0 0.1 1.3 1 0 0 1 1 1 0 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) Ald_Xan_dh_C2 PF02738.18 gi|15920967|ref|NP_376636.1| - 7e-110 368.1 0.0 7.9e-109 364.6 0.0 1.9 1 1 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 gi|15920967|ref|NP_376636.1| - 3.2e-11 43.5 0.0 7.2e-11 42.4 0.0 1.6 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain SGS PF05002.15 gi|15920967|ref|NP_376636.1| - 0.0099 16.0 0.0 0.025 14.7 0.0 1.6 1 0 0 1 1 1 1 SGS domain PIN PF01850.21 gi|15920969|ref|NP_376638.1| - 3.1e-14 53.5 1.0 3.3e-14 53.4 1.0 1.0 1 0 0 1 1 1 1 PIN domain PIN_9 PF18477.1 gi|15920969|ref|NP_376638.1| - 0.012 15.9 1.7 0.059 13.7 1.7 1.9 1 1 0 1 1 1 0 PIN like domain MazE_antitoxin PF04014.18 gi|15920970|ref|NP_376639.1| - 4.9e-13 48.7 0.5 6.8e-13 48.2 0.5 1.2 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin PrlF_antitoxin PF15937.5 gi|15920970|ref|NP_376639.1| - 5.4e-05 23.6 0.4 9.1e-05 22.8 0.4 1.6 1 1 0 1 1 1 1 prlF antitoxin for toxin YhaV_toxin Imm74 PF15603.6 gi|15920970|ref|NP_376639.1| - 0.0036 17.5 0.6 0.0043 17.2 0.6 1.2 1 0 0 1 1 1 1 Immunity protein 74 DUF104 PF01954.16 gi|15920970|ref|NP_376639.1| - 0.014 15.8 2.4 0.023 15.1 2.4 1.5 1 1 0 1 1 1 0 Protein of unknown function DUF104 DUF4875 PF16175.5 gi|15920970|ref|NP_376639.1| - 0.02 15.0 0.1 0.02 15.0 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4875) eIF-1a PF01176.19 gi|15920970|ref|NP_376639.1| - 0.044 13.6 0.9 0.06 13.2 0.9 1.3 1 0 0 1 1 1 0 Translation initiation factor 1A / IF-1 DUF1905 PF08922.11 gi|15920970|ref|NP_376639.1| - 0.076 13.1 0.1 0.53 10.4 0.0 1.9 1 1 0 2 2 2 0 Domain of unknown function (DUF1905) DUF488 PF04343.13 gi|15920971|ref|NP_376640.1| - 3.6e-31 108.3 0.0 4.4e-31 108.0 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function, DUF488 Ribonuc_red_lgN PF00317.21 gi|15920971|ref|NP_376640.1| - 0.005 16.8 0.0 0.0096 15.9 0.0 1.5 1 0 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain FeS_assembly_P PF01883.19 gi|15920972|ref|NP_376641.1| - 5.1e-18 65.0 0.2 6.3e-18 64.7 0.2 1.1 1 0 0 1 1 1 1 Iron-sulfur cluster assembly protein NifU PF01106.17 gi|15920972|ref|NP_376641.1| - 0.082 13.1 0.0 0.14 12.3 0.0 1.3 1 0 0 1 1 1 0 NifU-like domain Polbeta PF18765.1 gi|15920976|ref|NP_376645.1| - 1.2e-11 44.6 0.4 1.4e-11 44.3 0.4 1.1 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase NTP_transf_2 PF01909.23 gi|15920976|ref|NP_376645.1| - 2.9e-09 37.1 0.5 3.6e-09 36.8 0.5 1.2 1 1 0 1 1 1 1 Nucleotidyltransferase domain HEPN PF05168.14 gi|15920977|ref|NP_376646.1| - 2.7e-31 108.1 0.0 3.4e-31 107.8 0.0 1.1 1 0 0 1 1 1 1 HEPN domain DUF929 PF06053.11 gi|15920978|ref|NP_376647.1| - 1.5e-76 257.0 11.7 1.8e-76 256.8 11.7 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF929) GrpE PF01025.19 gi|15920978|ref|NP_376647.1| - 0.1 12.2 0.0 0.2 11.3 0.0 1.4 1 0 0 1 1 1 0 GrpE zf_CCCH_4 PF18345.1 gi|15920979|ref|NP_376648.1| - 1.7 8.8 8.5 12 6.2 2.0 3.6 3 0 0 3 3 3 0 Zinc finger domain TrmB PF01978.19 gi|15920980|ref|NP_376649.1| - 1.1e-14 54.1 0.4 1.5e-14 53.6 0.4 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|15920980|ref|NP_376649.1| - 9e-12 44.7 0.5 1.4e-11 44.1 0.5 1.3 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|15920980|ref|NP_376649.1| - 4.1e-11 42.6 0.0 6e-11 42.1 0.0 1.3 1 0 0 1 1 1 1 MarR family TFIIE_alpha PF02002.17 gi|15920980|ref|NP_376649.1| - 1.1e-09 38.1 2.0 1.4e-09 37.8 2.0 1.1 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_27 PF13463.6 gi|15920980|ref|NP_376649.1| - 7.6e-08 32.7 0.1 1.4e-07 31.9 0.1 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_11 PF08279.12 gi|15920980|ref|NP_376649.1| - 2.3e-06 27.4 1.1 4.1e-06 26.6 1.1 1.3 1 0 0 1 1 1 1 HTH domain HTH_24 PF13412.6 gi|15920980|ref|NP_376649.1| - 4.5e-06 26.1 1.4 5e-06 26.0 0.3 1.7 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding GntR PF00392.21 gi|15920980|ref|NP_376649.1| - 9.2e-06 25.2 0.1 2.1e-05 24.1 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_DeoR PF08220.12 gi|15920980|ref|NP_376649.1| - 3.5e-05 23.5 0.2 5.7e-05 22.8 0.2 1.3 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain Fe_dep_repress PF01325.19 gi|15920980|ref|NP_376649.1| - 3.9e-05 23.8 0.1 7.7e-05 22.8 0.1 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain Penicillinase_R PF03965.16 gi|15920980|ref|NP_376649.1| - 4.2e-05 23.9 0.1 5.2e-05 23.6 0.1 1.3 1 0 0 1 1 1 1 Penicillinase repressor HTH_5 PF01022.20 gi|15920980|ref|NP_376649.1| - 0.0001 22.1 0.4 0.00017 21.3 0.4 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_IclR PF09339.10 gi|15920980|ref|NP_376649.1| - 0.00036 20.3 0.0 0.00052 19.8 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain DUF4423 PF14394.6 gi|15920980|ref|NP_376649.1| - 0.00083 19.1 0.2 0.0013 18.5 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_34 PF13601.6 gi|15920980|ref|NP_376649.1| - 0.0011 19.1 0.1 0.0018 18.4 0.1 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_Crp_2 PF13545.6 gi|15920980|ref|NP_376649.1| - 0.0013 18.6 0.1 0.0018 18.2 0.1 1.2 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain Rrf2 PF02082.20 gi|15920980|ref|NP_376649.1| - 0.0014 18.9 0.2 0.0023 18.3 0.2 1.3 1 0 0 1 1 1 1 Transcriptional regulator KORA PF16509.5 gi|15920980|ref|NP_376649.1| - 0.0015 18.8 0.0 0.0022 18.2 0.0 1.3 1 0 0 1 1 1 1 TrfB plasmid transcriptional repressor HTH_20 PF12840.7 gi|15920980|ref|NP_376649.1| - 0.0022 18.0 0.1 0.004 17.2 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Mga PF08280.11 gi|15920980|ref|NP_376649.1| - 0.0025 17.8 0.2 0.0051 16.8 0.2 1.5 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain CvfB_WH PF17783.1 gi|15920980|ref|NP_376649.1| - 0.0062 16.3 0.1 0.011 15.5 0.1 1.4 1 0 0 1 1 1 1 CvfB-like winged helix domain RPA_C PF08784.11 gi|15920980|ref|NP_376649.1| - 0.0081 16.8 0.1 0.015 16.0 0.1 1.5 1 1 0 1 1 1 1 Replication protein A C terminal HTH_23 PF13384.6 gi|15920980|ref|NP_376649.1| - 0.0094 15.7 0.0 0.02 14.7 0.0 1.6 1 1 0 1 1 1 1 Homeodomain-like domain HxlR PF01638.17 gi|15920980|ref|NP_376649.1| - 0.012 15.5 0.2 0.018 14.9 0.2 1.2 1 0 0 1 1 1 0 HxlR-like helix-turn-helix GerE PF00196.19 gi|15920980|ref|NP_376649.1| - 0.015 14.8 0.1 0.029 13.9 0.1 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_29 PF13551.6 gi|15920980|ref|NP_376649.1| - 0.017 15.2 0.0 0.026 14.5 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn helix HTH_36 PF13730.6 gi|15920980|ref|NP_376649.1| - 0.017 15.0 0.6 0.03 14.3 0.1 1.6 2 0 0 2 2 1 0 Helix-turn-helix domain Dimerisation2 PF16864.5 gi|15920980|ref|NP_376649.1| - 0.018 15.0 0.0 0.026 14.5 0.0 1.2 1 0 0 1 1 1 0 Dimerisation domain Mga PF05043.13 gi|15920980|ref|NP_376649.1| - 0.028 15.0 0.3 0.058 14.0 0.0 1.7 2 0 0 2 2 1 0 Mga helix-turn-helix domain DUF2250 PF10007.9 gi|15920980|ref|NP_376649.1| - 0.033 14.3 1.0 0.044 13.9 0.9 1.4 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) SMC_ScpB PF04079.16 gi|15920980|ref|NP_376649.1| - 0.037 13.6 0.1 0.049 13.2 0.1 1.2 1 0 0 1 1 1 0 Segregation and condensation complex subunit ScpB Mnd1 PF03962.15 gi|15920980|ref|NP_376649.1| - 0.038 14.3 0.8 0.24 11.7 0.2 2.2 2 0 0 2 2 2 0 Mnd1 HTH domain B-block_TFIIIC PF04182.12 gi|15920980|ref|NP_376649.1| - 0.043 14.0 0.0 0.059 13.5 0.0 1.3 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC Cullin_Nedd8 PF10557.9 gi|15920980|ref|NP_376649.1| - 0.053 13.6 0.5 0.2 11.7 0.1 2.0 2 0 0 2 2 2 0 Cullin protein neddylation domain HTH_9 PF08221.11 gi|15920980|ref|NP_376649.1| - 0.081 13.0 0.1 0.13 12.3 0.1 1.3 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_38 PF13936.6 gi|15920980|ref|NP_376649.1| - 0.096 12.5 1.3 0.14 11.9 0.0 2.0 3 0 0 3 3 1 0 Helix-turn-helix domain FeoC PF09012.10 gi|15920980|ref|NP_376649.1| - 0.099 12.7 0.2 0.15 12.2 0.2 1.3 1 0 0 1 1 1 0 FeoC like transcriptional regulator HEPN PF05168.14 gi|15920981|ref|NP_376650.1| - 1.9e-26 92.5 3.4 2.1e-26 92.3 3.4 1.0 1 0 0 1 1 1 1 HEPN domain Glyco_transf_64 PF09258.10 gi|15920981|ref|NP_376650.1| - 0.059 12.6 0.0 0.084 12.1 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family 64 domain TPR_2 PF07719.17 gi|15920981|ref|NP_376650.1| - 0.072 13.2 3.4 0.13 12.4 0.3 2.8 2 1 1 3 3 3 0 Tetratricopeptide repeat TPR_1 PF00515.28 gi|15920981|ref|NP_376650.1| - 0.13 12.1 1.7 0.41 10.5 0.1 2.7 3 0 0 3 3 3 0 Tetratricopeptide repeat Polbeta PF18765.1 gi|15920982|ref|NP_376651.1| - 4.4e-08 33.1 0.1 7.9e-08 32.3 0.0 1.5 1 1 1 2 2 2 1 Polymerase beta, Nucleotidyltransferase NTP_transf_2 PF01909.23 gi|15920982|ref|NP_376651.1| - 1.1e-07 32.1 0.2 1.8e-07 31.4 0.1 1.5 1 1 0 1 1 1 1 Nucleotidyltransferase domain RgpF PF05045.12 gi|15920982|ref|NP_376651.1| - 0.036 12.8 0.1 0.051 12.3 0.0 1.3 1 1 0 1 1 1 0 Rhamnan synthesis protein F TPP_enzyme_N PF02776.18 gi|15920983|ref|NP_376652.1| - 1.1e-46 158.6 0.0 8.9e-46 155.6 0.0 2.1 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|15920983|ref|NP_376652.1| - 4.1e-34 117.6 0.1 2.6e-33 115.0 0.1 2.1 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|15920983|ref|NP_376652.1| - 7.3e-21 74.4 0.0 2e-20 72.9 0.0 1.8 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain RVT_3 PF13456.6 gi|15920984|ref|NP_376653.1| - 2.8e-17 62.7 0.0 3.2e-17 62.5 0.0 1.1 1 0 0 1 1 1 1 Reverse transcriptase-like RNase_H PF00075.24 gi|15920984|ref|NP_376653.1| - 0.00029 21.0 0.0 0.00046 20.4 0.0 1.3 1 1 0 1 1 1 1 RNase H ABC2_membrane PF01061.24 gi|15920986|ref|NP_376655.1| - 1.9e-10 40.5 31.9 1.9e-10 40.5 31.9 1.9 2 1 0 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|15920986|ref|NP_376655.1| - 0.041 13.0 36.1 0.019 14.1 34.2 1.3 1 1 0 1 1 1 0 ABC-2 family transporter protein ABC_tran PF00005.27 gi|15920987|ref|NP_376656.1| - 8e-10 39.4 0.0 2.3e-09 37.9 0.0 1.7 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|15920987|ref|NP_376656.1| - 3.6e-07 30.3 0.0 5.1e-07 29.8 0.0 1.3 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system PadR PF03551.14 gi|15920988|ref|NP_376657.1| - 2e-18 66.1 0.0 3.8e-18 65.2 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family DUF4364 PF14277.6 gi|15920988|ref|NP_376657.1| - 9.3e-05 22.2 1.4 0.00016 21.5 1.4 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4364) HTH_34 PF13601.6 gi|15920988|ref|NP_376657.1| - 0.00018 21.7 0.1 0.00058 20.0 0.0 2.0 2 1 0 2 2 2 1 Winged helix DNA-binding domain RTP PF02334.16 gi|15920988|ref|NP_376657.1| - 0.00053 20.6 0.5 0.0012 19.5 0.5 1.7 1 1 0 1 1 1 1 Replication terminator protein DUF505 PF04458.12 gi|15920988|ref|NP_376657.1| - 0.00084 17.8 0.1 0.0011 17.4 0.1 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF505) UvrA_inter PF17760.1 gi|15920988|ref|NP_376657.1| - 0.0013 18.8 0.1 0.0019 18.2 0.1 1.3 1 0 0 1 1 1 1 UvrA interaction domain TrmB PF01978.19 gi|15920988|ref|NP_376657.1| - 0.0045 16.9 1.8 0.017 15.0 0.6 2.3 2 1 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_45 PF14947.6 gi|15920988|ref|NP_376657.1| - 0.0063 16.5 1.9 0.0088 16.0 0.2 2.1 2 1 1 3 3 3 1 Winged helix-turn-helix DUF1495 PF07381.11 gi|15920988|ref|NP_376657.1| - 0.0083 15.9 0.0 0.019 14.8 0.0 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain (DUF1495) FUR PF01475.19 gi|15920988|ref|NP_376657.1| - 0.012 15.8 0.0 0.018 15.2 0.0 1.5 1 1 0 1 1 1 0 Ferric uptake regulator family HTH_5 PF01022.20 gi|15920988|ref|NP_376657.1| - 0.042 13.7 0.1 1.2 9.0 0.0 2.7 2 1 0 2 2 2 0 Bacterial regulatory protein, arsR family DUF3116 PF11313.8 gi|15920988|ref|NP_376657.1| - 0.071 13.0 0.2 0.18 11.7 0.2 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3116) Stork_head PF10264.9 gi|15920988|ref|NP_376657.1| - 0.074 13.2 0.0 0.17 12.1 0.0 1.6 2 0 0 2 2 2 0 Winged helix Storkhead-box1 domain HTH_27 PF13463.6 gi|15920988|ref|NP_376657.1| - 0.085 13.4 0.0 0.33 11.5 0.0 1.9 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_42 PF06224.12 gi|15920988|ref|NP_376657.1| - 0.11 12.1 0.0 0.11 12.0 0.0 1.0 1 0 0 1 1 1 0 Winged helix DNA-binding domain HxlR PF01638.17 gi|15920989|ref|NP_376658.1| - 3.9e-23 81.1 0.1 4.6e-23 80.9 0.1 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_5 PF01022.20 gi|15920989|ref|NP_376658.1| - 6.7e-08 32.3 0.0 1e-07 31.7 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|15920989|ref|NP_376658.1| - 0.00016 21.7 0.0 0.00025 21.0 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_34 PF13601.6 gi|15920989|ref|NP_376658.1| - 0.00028 21.0 0.2 0.00036 20.6 0.2 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_45 PF14947.6 gi|15920989|ref|NP_376658.1| - 0.00091 19.2 0.1 0.0013 18.7 0.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_24 PF13412.6 gi|15920989|ref|NP_376658.1| - 0.00097 18.7 0.0 0.0014 18.1 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding RepL PF05732.11 gi|15920989|ref|NP_376658.1| - 0.0018 17.7 0.2 0.003 17.0 0.2 1.5 1 1 0 1 1 1 1 Firmicute plasmid replication protein (RepL) PadR PF03551.14 gi|15920989|ref|NP_376658.1| - 0.0019 18.1 0.1 0.0027 17.6 0.1 1.2 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family MarR PF01047.22 gi|15920989|ref|NP_376658.1| - 0.0026 17.7 0.1 0.0034 17.3 0.1 1.3 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|15920989|ref|NP_376658.1| - 0.0042 16.9 0.0 0.0063 16.4 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|15920989|ref|NP_376658.1| - 0.011 16.2 0.0 0.015 15.7 0.0 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_12 PF08461.10 gi|15920989|ref|NP_376658.1| - 0.015 15.2 0.1 0.028 14.4 0.1 1.4 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain FUR PF01475.19 gi|15920989|ref|NP_376658.1| - 0.035 14.2 0.1 0.047 13.8 0.1 1.2 1 0 0 1 1 1 0 Ferric uptake regulator family HTH_Crp_2 PF13545.6 gi|15920989|ref|NP_376658.1| - 0.037 14.0 0.1 0.061 13.3 0.1 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain TrmB PF01978.19 gi|15920989|ref|NP_376658.1| - 0.042 13.7 0.1 0.055 13.4 0.1 1.3 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB SSF PF00474.17 gi|15920990|ref|NP_376659.1| - 1e-10 41.1 28.9 1e-10 41.1 28.9 1.7 2 0 0 2 2 2 1 Sodium:solute symporter family RIC3 PF15361.6 gi|15920990|ref|NP_376659.1| - 0.29 11.5 0.2 0.66 10.4 0.2 1.5 1 0 0 1 1 1 0 Resistance to inhibitors of cholinesterase homologue 3 DUF3311 PF11755.8 gi|15920991|ref|NP_376660.1| - 3.2e-11 43.0 3.4 4.3e-11 42.6 3.4 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF3311) DUF3902 PF13042.6 gi|15920991|ref|NP_376660.1| - 0.024 14.2 4.7 0.042 13.4 4.7 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF3902) DUF4231 PF14015.6 gi|15920991|ref|NP_376660.1| - 0.048 14.1 0.7 0.065 13.7 0.7 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF4231) DctQ PF04290.12 gi|15920991|ref|NP_376660.1| - 0.086 12.8 3.3 0.1 12.5 3.3 1.0 1 0 0 1 1 1 0 Tripartite ATP-independent periplasmic transporters, DctQ component Pilin_N PF07790.11 gi|15920991|ref|NP_376660.1| - 0.14 13.1 3.3 0.23 12.4 0.1 2.0 2 0 0 2 2 2 0 Archaeal Type IV pilin, N-terminal SLATT_fungal PF18142.1 gi|15920991|ref|NP_376660.1| - 0.16 11.9 0.0 0.16 11.9 0.0 1.5 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain LSM PF01423.22 gi|15920992|ref|NP_376661.1| - 4.2e-24 84.0 0.6 4.7e-24 83.9 0.6 1.0 1 0 0 1 1 1 1 LSM domain SM-ATX PF14438.6 gi|15920992|ref|NP_376661.1| - 0.00021 21.4 0.2 0.00025 21.1 0.2 1.2 1 0 0 1 1 1 1 Ataxin 2 SM domain DUF87 PF01935.17 gi|15920996|ref|NP_376665.1| - 4.4e-43 148.0 0.3 7e-43 147.3 0.3 1.3 1 0 0 1 1 1 1 Helicase HerA, central domain FtsK_SpoIIIE PF01580.18 gi|15920996|ref|NP_376665.1| - 0.0029 17.0 0.0 0.0067 15.8 0.0 1.5 1 0 0 1 1 1 1 FtsK/SpoIIIE family TrwB_AAD_bind PF10412.9 gi|15920996|ref|NP_376665.1| - 0.0043 16.0 0.0 0.01 14.8 0.0 1.6 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain AAA_22 PF13401.6 gi|15920996|ref|NP_376665.1| - 0.029 14.6 0.0 0.35 11.1 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_10 PF12846.7 gi|15920996|ref|NP_376665.1| - 0.12 11.3 0.1 1.7 7.5 0.0 2.1 2 0 0 2 2 2 0 AAA-like domain ABC_tran PF00005.27 gi|15920996|ref|NP_376665.1| - 0.12 12.9 0.0 0.23 12.0 0.0 1.4 1 0 0 1 1 1 0 ABC transporter RPAP3_C PF13877.6 gi|15920997|ref|NP_376666.1| - 0.019 15.5 1.5 1.6 9.3 0.1 3.5 3 0 0 3 3 3 0 Potential Monad-binding region of RPAP3 MCM_N PF14551.6 gi|15920997|ref|NP_376666.1| - 0.077 13.6 1.1 0.67 10.6 0.0 3.1 2 0 0 2 2 2 0 MCM N-terminal domain AAA_22 PF13401.6 gi|15920997|ref|NP_376666.1| - 0.12 12.6 0.0 39 4.5 0.0 3.2 1 1 1 2 2 2 0 AAA domain PI_PP_I PF18363.1 gi|15920997|ref|NP_376666.1| - 0.34 11.1 6.5 18 5.6 0.4 3.9 3 0 0 3 3 3 0 Phosphoinositide phosphatase insertion domain CSTF2_hinge PF14327.6 gi|15920997|ref|NP_376666.1| - 0.84 10.1 2.9 23 5.5 0.2 3.1 1 1 1 2 2 2 0 Hinge domain of cleavage stimulation factor subunit 2 DNA_repr_REX1B PF14966.6 gi|15920997|ref|NP_376666.1| - 3.2 8.5 8.9 9.1 7.0 0.2 4.0 3 0 0 3 3 3 0 DNA repair REX1-B IFT81_CH PF18383.1 gi|15920997|ref|NP_376666.1| - 8.9 6.6 14.9 0.13 12.5 2.5 4.1 5 0 0 5 5 5 0 Intraflagellar transport 81 calponin homology domain VGPC1_C PF16799.5 gi|15920998|ref|NP_376667.1| - 0.014 15.4 0.1 0.014 15.4 0.1 2.6 3 0 0 3 3 3 0 C-terminal membrane-localisation domain of ion-channel, VCN1 Glyco_H_20C_C PF18088.1 gi|15920998|ref|NP_376667.1| - 0.017 15.0 3.3 0.11 12.3 0.1 2.3 2 0 0 2 2 2 0 Glycoside Hydrolase 20C C-terminal domain Glu_cyclase_2 PF05096.12 gi|15920998|ref|NP_376667.1| - 0.055 12.9 0.9 0.099 12.1 0.9 1.4 1 0 0 1 1 1 0 Glutamine cyclotransferase PqqD PF05402.12 gi|15920998|ref|NP_376667.1| - 0.069 13.5 1.9 12 6.3 0.2 2.7 2 0 0 2 2 2 0 Coenzyme PQQ synthesis protein D (PqqD) Rsd_AlgQ PF04353.13 gi|15920998|ref|NP_376667.1| - 0.072 13.0 6.6 0.13 12.2 5.7 1.9 1 1 0 1 1 1 0 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ DASH_Dam1 PF08653.10 gi|15920998|ref|NP_376667.1| - 0.12 12.2 0.7 7.3 6.5 0.1 2.8 2 0 0 2 2 2 0 DASH complex subunit Dam1 DUF5082 PF16888.5 gi|15920998|ref|NP_376667.1| - 0.12 12.6 17.3 0.7 10.2 11.0 2.9 2 1 0 2 2 2 0 Domain of unknown function (DUF5082) Dabb PF07876.12 gi|15920998|ref|NP_376667.1| - 0.25 12.0 1.7 0.41 11.3 0.4 2.1 2 0 0 2 2 2 0 Stress responsive A/B Barrel Domain NPV_P10 PF05531.12 gi|15920998|ref|NP_376667.1| - 0.35 11.3 9.1 0.25 11.8 0.6 3.1 1 1 2 3 3 3 0 Nucleopolyhedrovirus P10 protein IF-2B PF01008.17 gi|15920998|ref|NP_376667.1| - 0.44 9.7 4.8 0.8 8.9 4.8 1.5 1 0 0 1 1 1 0 Initiation factor 2 subunit family DUF1216 PF06746.11 gi|15920998|ref|NP_376667.1| - 1.1 9.3 9.8 0.09 12.8 2.9 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1216) Atg14 PF10186.9 gi|15920998|ref|NP_376667.1| - 1.3 8.0 19.1 0.055 12.5 5.2 2.1 1 1 0 2 2 2 0 Vacuolar sorting 38 and autophagy-related subunit 14 AKNA PF12443.8 gi|15920998|ref|NP_376667.1| - 1.6 9.4 4.6 1.2 9.8 0.9 2.3 2 1 0 2 2 2 0 AT-hook-containing transcription factor DUF4140 PF13600.6 gi|15920998|ref|NP_376667.1| - 3.1 8.3 7.2 23 5.5 0.5 2.6 2 1 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) DUF2203 PF09969.9 gi|15920998|ref|NP_376667.1| - 4.4 8.1 8.2 1.1e+02 3.6 8.2 2.6 1 1 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) TMPIT PF07851.13 gi|15920998|ref|NP_376667.1| - 5.2 6.2 11.5 1.1 8.4 2.8 2.0 1 1 1 2 2 2 0 TMPIT-like protein Bud13 PF09736.9 gi|15920998|ref|NP_376667.1| - 6 7.3 8.7 8.1 6.8 7.5 1.8 1 1 1 2 2 2 0 Pre-mRNA-splicing factor of RES complex SlyX PF04102.12 gi|15920998|ref|NP_376667.1| - 6.9 7.4 7.6 26 5.5 0.1 3.4 3 1 0 3 3 3 0 SlyX NurA PF09376.10 gi|15920999|ref|NP_376668.1| - 1.1e-24 87.5 2.0 1.5e-24 87.0 2.0 1.2 1 0 0 1 1 1 1 NurA domain HTH_45 PF14947.6 gi|15921000|ref|NP_376669.1| - 5.1e-19 68.0 5.7 5.1e-19 68.0 5.7 1.5 2 0 0 2 2 2 1 Winged helix-turn-helix DUF4364 PF14277.6 gi|15921000|ref|NP_376669.1| - 1.4e-07 31.4 3.6 1.7e-07 31.1 3.6 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4364) HTH_34 PF13601.6 gi|15921000|ref|NP_376669.1| - 6.2e-05 23.1 1.5 8.9e-05 22.6 1.1 1.6 1 1 0 1 1 1 1 Winged helix DNA-binding domain HTH_27 PF13463.6 gi|15921000|ref|NP_376669.1| - 9e-05 22.9 2.2 0.0002 21.8 0.2 2.3 2 1 0 2 2 2 1 Winged helix DNA-binding domain Put_DNA-bind_N PF06971.13 gi|15921000|ref|NP_376669.1| - 0.00097 19.1 1.4 0.038 14.0 0.1 2.4 2 0 0 2 2 2 1 Putative DNA-binding protein N-terminus PadR PF03551.14 gi|15921000|ref|NP_376669.1| - 0.0011 18.8 1.1 0.0011 18.8 1.1 1.9 2 0 0 2 2 2 1 Transcriptional regulator PadR-like family DUF3116 PF11313.8 gi|15921000|ref|NP_376669.1| - 0.0027 17.5 1.3 0.0077 16.1 1.3 1.9 1 1 0 1 1 1 1 Protein of unknown function (DUF3116) HxlR PF01638.17 gi|15921000|ref|NP_376669.1| - 0.0037 17.1 0.2 0.0049 16.7 0.2 1.4 1 0 0 1 1 1 1 HxlR-like helix-turn-helix DUF3199 PF11436.8 gi|15921000|ref|NP_376669.1| - 0.011 15.8 0.4 0.013 15.5 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3199) FaeA PF04703.12 gi|15921000|ref|NP_376669.1| - 0.011 16.1 0.2 0.011 16.1 0.2 1.7 2 0 0 2 2 2 0 FaeA-like protein Ribosomal_S8 PF00410.19 gi|15921000|ref|NP_376669.1| - 0.021 14.8 1.7 0.024 14.6 1.7 1.2 1 0 0 1 1 1 0 Ribosomal protein S8 23S_rRNA_IVP PF05635.11 gi|15921000|ref|NP_376669.1| - 0.021 15.1 1.9 0.037 14.3 0.3 1.9 1 1 1 2 2 2 0 23S rRNA-intervening sequence protein Mrr_N PF14338.6 gi|15921000|ref|NP_376669.1| - 0.024 14.8 0.8 0.039 14.1 0.1 1.8 2 1 0 2 2 2 0 Mrr N-terminal domain PaaX PF07848.12 gi|15921000|ref|NP_376669.1| - 0.068 13.4 0.1 0.2 11.9 0.1 2.0 2 1 0 2 2 2 0 PaaX-like protein HTH_5 PF01022.20 gi|15921000|ref|NP_376669.1| - 0.11 12.4 2.1 2.2 8.2 0.2 2.6 2 1 0 2 2 2 0 Bacterial regulatory protein, arsR family DUF4460 PF14687.6 gi|15921000|ref|NP_376669.1| - 0.23 11.5 2.5 0.41 10.7 1.1 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4460) tRNA-synt_2b PF00587.25 gi|15921002|ref|NP_376671.1| - 0.016 15.2 0.1 0.023 14.7 0.1 1.3 1 1 0 1 1 1 0 tRNA synthetase class II core domain (G, H, P, S and T) DUF3263 PF11662.8 gi|15921002|ref|NP_376671.1| - 0.082 12.8 0.0 0.26 11.2 0.0 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3263) AAA_31 PF13614.6 gi|15921003|ref|NP_376672.1| - 9.7e-18 64.7 0.0 1.4e-17 64.2 0.0 1.2 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|15921003|ref|NP_376672.1| - 9.3e-12 45.1 0.0 1.3e-11 44.6 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|15921003|ref|NP_376672.1| - 2.1e-07 30.7 0.2 3.5e-07 29.9 0.2 1.5 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase ArsA_ATPase PF02374.15 gi|15921003|ref|NP_376672.1| - 2.4e-06 27.0 1.0 1.5e-05 24.3 1.0 2.2 1 1 0 1 1 1 1 Anion-transporting ATPase MipZ PF09140.11 gi|15921003|ref|NP_376672.1| - 2.1e-05 24.0 0.0 4.3e-05 22.9 0.0 1.5 1 0 0 1 1 1 1 ATPase MipZ CBP_BcsQ PF06564.12 gi|15921003|ref|NP_376672.1| - 5e-05 22.9 0.0 0.00015 21.3 0.0 1.7 2 0 0 2 2 2 1 Cellulose biosynthesis protein BcsQ Fer4_NifH PF00142.18 gi|15921003|ref|NP_376672.1| - 0.00011 21.7 0.0 0.00019 21.0 0.0 1.4 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CLP1_P PF16575.5 gi|15921003|ref|NP_376672.1| - 0.0015 18.4 0.0 0.0025 17.6 0.0 1.3 1 0 0 1 1 1 1 mRNA cleavage and polyadenylation factor CLP1 P-loop VirC1 PF07015.11 gi|15921003|ref|NP_376672.1| - 0.018 14.3 0.0 0.033 13.5 0.0 1.4 1 0 0 1 1 1 0 VirC1 protein IstB_IS21 PF01695.17 gi|15921003|ref|NP_376672.1| - 0.053 13.3 0.0 0.09 12.5 0.0 1.3 1 0 0 1 1 1 0 IstB-like ATP binding protein APS_kinase PF01583.20 gi|15921003|ref|NP_376672.1| - 0.13 12.1 0.1 0.44 10.4 0.0 1.9 3 0 0 3 3 3 0 Adenylylsulphate kinase CBS PF00571.28 gi|15921004|ref|NP_376673.1| - 9.8e-50 166.8 12.2 3.7e-13 49.7 0.3 4.1 4 0 0 4 4 4 4 CBS domain LigB PF02900.18 gi|15921005|ref|NP_376674.1| - 2.2e-41 141.7 0.0 2.5e-41 141.5 0.0 1.0 1 0 0 1 1 1 1 Catalytic LigB subunit of aromatic ring-opening dioxygenase PadR PF03551.14 gi|15921006|ref|NP_376675.1| - 5.6e-05 23.0 0.2 8.5e-05 22.4 0.2 1.2 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family TrmB PF01978.19 gi|15921006|ref|NP_376675.1| - 0.0011 18.8 0.1 0.0018 18.1 0.1 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB FUR PF01475.19 gi|15921006|ref|NP_376675.1| - 0.026 14.7 0.0 0.03 14.5 0.0 1.2 1 0 0 1 1 1 0 Ferric uptake regulator family PaaX PF07848.12 gi|15921006|ref|NP_376675.1| - 0.03 14.5 0.0 0.055 13.7 0.0 1.4 1 0 0 1 1 1 0 PaaX-like protein Glyco_hydro_1 PF00232.18 gi|15921007|ref|NP_376676.1| - 8.8e-52 176.0 0.7 3.2e-27 95.1 0.1 2.2 1 1 1 2 2 2 2 Glycosyl hydrolase family 1 Aurora-A_bind PF09041.10 gi|15921007|ref|NP_376676.1| - 0.37 10.9 3.1 0.42 10.7 1.3 2.0 2 0 0 2 2 2 0 Aurora-A binding Methyltransf_11 PF08241.12 gi|15921009|ref|NP_376678.1| - 3.7e-19 69.2 0.0 5.2e-19 68.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|15921009|ref|NP_376678.1| - 1.4e-14 54.5 0.0 2e-14 54.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|15921009|ref|NP_376678.1| - 3.5e-11 43.1 0.0 4.5e-11 42.8 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|15921009|ref|NP_376678.1| - 1.4e-10 41.2 0.0 1.7e-10 41.0 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|15921009|ref|NP_376678.1| - 1.5e-10 41.7 0.0 2.1e-10 41.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|15921009|ref|NP_376678.1| - 1.6e-06 27.6 0.0 2e-06 27.3 0.0 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_8 PF05148.15 gi|15921009|ref|NP_376678.1| - 2.4e-05 24.3 0.0 3.5e-05 23.8 0.0 1.3 1 1 0 1 1 1 1 Hypothetical methyltransferase MTS PF05175.14 gi|15921009|ref|NP_376678.1| - 0.0002 21.0 0.0 0.00027 20.5 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_2 PF00891.18 gi|15921009|ref|NP_376678.1| - 0.0011 18.2 0.0 0.0015 17.9 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase domain NodS PF05401.11 gi|15921009|ref|NP_376678.1| - 0.0034 17.0 0.0 0.0045 16.6 0.0 1.1 1 0 0 1 1 1 1 Nodulation protein S (NodS) Plk4_PB1 PF18190.1 gi|15921009|ref|NP_376678.1| - 0.03 14.5 0.3 0.054 13.7 0.3 1.4 1 0 0 1 1 1 0 Polo-like Kinase 4 Polo Box 1 Nop14 PF04147.12 gi|15921009|ref|NP_376678.1| - 0.036 12.3 0.0 0.044 12.0 0.0 1.0 1 0 0 1 1 1 0 Nop14-like family Methyltransf_24 PF13578.6 gi|15921009|ref|NP_376678.1| - 0.093 13.8 0.0 0.18 12.8 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain MetW PF07021.12 gi|15921009|ref|NP_376678.1| - 0.12 11.9 0.0 0.21 11.2 0.0 1.3 1 1 0 1 1 1 0 Methionine biosynthesis protein MetW DUF72 PF01904.18 gi|15921010|ref|NP_376679.1| - 4.9e-33 115.1 0.2 6.2e-33 114.7 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF72 Tobravirus_2B PF05271.11 gi|15921010|ref|NP_376679.1| - 0.027 14.4 0.1 0.088 12.7 0.0 1.9 2 0 0 2 2 2 0 Tobravirus 2B protein PaREP1 PF05942.11 gi|15921011|ref|NP_376680.1| - 4.1e-12 46.1 0.0 7.9e-12 45.1 0.0 1.4 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family Glyco_hydro_30C PF17189.4 gi|15921011|ref|NP_376680.1| - 0.018 15.2 0.0 0.04 14.1 0.0 1.5 2 0 0 2 2 2 0 Glycosyl hydrolase family 30 beta sandwich domain GTP-bdg_M PF16360.5 gi|15921011|ref|NP_376680.1| - 0.1 13.2 0.2 0.25 12.0 0.0 1.7 2 0 0 2 2 2 0 GTP-binding GTPase Middle Region Rhomboid_N PF12122.8 gi|15921011|ref|NP_376680.1| - 0.21 11.8 1.0 1 9.6 0.0 2.4 2 1 0 2 2 2 0 Cytoplasmic N-terminal domain of rhomboid serine protease Pkinase PF00069.25 gi|15921012|ref|NP_376681.1| - 3.1e-30 105.4 0.1 6e-30 104.5 0.1 1.5 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 gi|15921012|ref|NP_376681.1| - 2.6e-09 36.7 0.0 8.2e-09 35.1 0.0 1.9 1 1 0 1 1 1 1 Protein tyrosine kinase FTA2 PF13095.6 gi|15921012|ref|NP_376681.1| - 0.049 13.2 0.1 2.5 7.7 0.0 2.3 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 Peptidase_S9 PF00326.21 gi|15921013|ref|NP_376682.1| - 2.2e-47 161.3 0.1 3e-47 160.8 0.1 1.2 1 0 0 1 1 1 1 Prolyl oligopeptidase family Peptidase_S15 PF02129.18 gi|15921013|ref|NP_376682.1| - 6.9e-07 29.1 0.2 0.00057 19.6 0.3 2.2 1 1 0 2 2 2 2 X-Pro dipeptidyl-peptidase (S15 family) DLH PF01738.18 gi|15921013|ref|NP_376682.1| - 2.4e-06 27.3 0.1 1.8e-05 24.4 0.1 2.1 1 1 0 1 1 1 1 Dienelactone hydrolase family Abhydrolase_1 PF00561.20 gi|15921013|ref|NP_376682.1| - 1.6e-05 24.7 1.0 0.0018 17.9 1.1 2.3 1 1 1 2 2 2 1 alpha/beta hydrolase fold DPPIV_N PF00930.21 gi|15921013|ref|NP_376682.1| - 3.2e-05 22.9 0.1 0.016 13.9 0.0 3.1 3 0 0 3 3 3 1 Dipeptidyl peptidase IV (DPP IV) N-terminal region Hydrolase_4 PF12146.8 gi|15921013|ref|NP_376682.1| - 0.0037 16.6 0.1 0.91 8.7 0.0 2.2 2 0 0 2 2 2 2 Serine aminopeptidase, S33 FSH1 PF03959.13 gi|15921013|ref|NP_376682.1| - 0.024 14.3 0.0 0.049 13.3 0.0 1.4 1 0 0 1 1 1 0 Serine hydrolase (FSH1) Abhydrolase_6 PF12697.7 gi|15921013|ref|NP_376682.1| - 0.032 14.8 0.0 0.043 14.4 0.0 1.2 1 0 0 1 1 1 0 Alpha/beta hydrolase family PD40 PF07676.12 gi|15921013|ref|NP_376682.1| - 0.042 13.8 3.4 16 5.6 0.0 4.6 5 0 0 5 5 5 0 WD40-like Beta Propeller Repeat Abhydrolase_2 PF02230.16 gi|15921013|ref|NP_376682.1| - 0.044 13.6 0.0 0.12 12.2 0.0 1.6 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase Abhydrolase_4 PF08386.10 gi|15921013|ref|NP_376682.1| - 0.051 13.7 0.0 0.11 12.6 0.0 1.5 1 0 0 1 1 1 0 TAP-like protein MFS_1 PF07690.16 gi|15921014|ref|NP_376683.1| - 3.4e-21 75.6 52.9 3.1e-15 55.9 36.0 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily PIN PF01850.21 gi|15921016|ref|NP_376685.1| - 2.8e-14 53.7 0.0 3.2e-14 53.5 0.0 1.1 1 0 0 1 1 1 1 PIN domain PIN_3 PF13470.6 gi|15921016|ref|NP_376685.1| - 0.087 13.6 0.0 0.096 13.4 0.0 1.2 1 0 0 1 1 1 0 PIN domain AMP-binding PF00501.28 gi|15921017|ref|NP_376686.1| - 8.5e-82 275.0 0.1 1.1e-81 274.7 0.1 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|15921017|ref|NP_376686.1| - 1.6e-24 86.7 1.8 4e-24 85.4 1.8 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain ACAS_N PF16177.5 gi|15921017|ref|NP_376686.1| - 1.3e-19 69.8 1.1 2.8e-19 68.8 1.1 1.6 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus KHA PF11834.8 gi|15921017|ref|NP_376686.1| - 0.13 12.4 0.0 16 5.7 0.0 3.4 4 0 0 4 4 4 0 KHA, dimerisation domain of potassium ion channel MFS_1 PF07690.16 gi|15921018|ref|NP_376687.1| - 4.2e-06 25.9 57.4 0.081 11.8 49.3 3.7 1 1 1 2 2 2 2 Major Facilitator Superfamily EBP PF05241.12 gi|15921018|ref|NP_376687.1| - 0.026 14.0 4.5 0.06 12.8 4.5 1.6 1 0 0 1 1 1 0 Emopamil binding protein Polbeta PF18765.1 gi|15921019|ref|NP_376688.1| - 1.2e-15 57.3 0.4 1.8e-15 56.8 0.4 1.3 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase NTP_transf_2 PF01909.23 gi|15921019|ref|NP_376688.1| - 8.6e-05 22.8 0.2 0.00014 22.1 0.2 1.3 1 0 0 1 1 1 1 Nucleotidyltransferase domain DUF86 PF01934.17 gi|15921020|ref|NP_376689.1| - 1.3e-18 67.0 0.4 1.5e-18 66.8 0.4 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF86 DUF4145 PF13643.6 gi|15921020|ref|NP_376689.1| - 0.021 14.9 0.1 0.063 13.4 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF4145) NTase_sub_bind PF08780.11 gi|15921020|ref|NP_376689.1| - 0.026 14.5 0.2 0.035 14.1 0.2 1.3 1 0 0 1 1 1 0 Nucleotidyltransferase substrate binding protein like CtsR_C PF17727.1 gi|15921020|ref|NP_376689.1| - 0.049 13.7 0.6 0.23 11.6 0.4 2.2 1 1 1 2 2 2 0 CtsR C-terminal dimerization domain DUF4231 PF14015.6 gi|15921021|ref|NP_376690.1| - 1.2 9.6 5.4 0.43 11.1 2.4 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF4231) Bac_small_YrzI PF09501.10 gi|15921023|ref|NP_376692.1| - 0.0069 16.5 0.6 0.014 15.5 0.6 1.4 1 0 0 1 1 1 1 Probable sporulation protein (Bac_small_yrzI) Tk-SP_N-pro PF18237.1 gi|15921023|ref|NP_376692.1| - 0.0092 16.0 0.1 0.024 14.7 0.1 1.7 1 0 0 1 1 1 1 Tk-SP N-propeptide domain NTP_transf_2 PF01909.23 gi|15921024|ref|NP_376693.1| - 3.1e-14 53.0 0.3 4.4e-14 52.5 0.3 1.2 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|15921024|ref|NP_376693.1| - 5.9e-10 39.1 0.2 1.2e-09 38.1 0.2 1.6 1 1 1 2 2 2 1 Polymerase beta, Nucleotidyltransferase DNA_pol_B_palm PF14792.6 gi|15921024|ref|NP_376693.1| - 0.00026 21.2 0.0 0.00031 20.9 0.0 1.1 1 0 0 1 1 1 1 DNA polymerase beta palm Anticodon_1 PF08264.13 gi|15921024|ref|NP_376693.1| - 0.018 15.0 1.4 0.018 15.0 1.4 1.8 2 0 0 2 2 2 0 Anticodon-binding domain of tRNA APAF1_C PF17908.1 gi|15921024|ref|NP_376693.1| - 0.081 12.9 1.5 0.12 12.3 0.1 1.8 2 0 0 2 2 2 0 APAF-1 helical domain HTH_48 PF17906.1 gi|15921024|ref|NP_376693.1| - 0.14 12.3 1.1 0.48 10.6 1.0 1.9 1 1 0 1 1 1 0 HTH domain in Mos1 transposase HEPN PF05168.14 gi|15921025|ref|NP_376694.1| - 7.7e-20 71.2 0.0 8.9e-20 71.0 0.0 1.1 1 0 0 1 1 1 1 HEPN domain Phe_hydrox_dim PF07976.12 gi|15921025|ref|NP_376694.1| - 0.11 12.5 0.0 0.13 12.3 0.0 1.1 1 0 0 1 1 1 0 Phenol hydroxylase, C-terminal dimerisation domain HEPN PF05168.14 gi|15921026|ref|NP_376695.1| - 5.6e-27 94.2 1.2 6.8e-27 93.9 1.2 1.0 1 0 0 1 1 1 1 HEPN domain SPO22 PF08631.10 gi|15921026|ref|NP_376695.1| - 0.0025 17.3 2.3 0.0038 16.7 2.3 1.4 1 1 0 1 1 1 1 Meiosis protein SPO22/ZIP4 like FAD_SOX PF18371.1 gi|15921026|ref|NP_376695.1| - 0.0087 16.4 0.1 0.015 15.6 0.1 1.4 1 1 0 1 1 1 1 Flavin adenine dinucleotide (FAD)-dependent sulfhydryl oxidase TPR_12 PF13424.6 gi|15921026|ref|NP_376695.1| - 0.068 13.5 1.7 0.21 11.9 0.3 2.3 3 0 0 3 3 3 0 Tetratricopeptide repeat TPR_2 PF07719.17 gi|15921026|ref|NP_376695.1| - 0.081 13.1 1.0 0.081 13.1 1.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat NTP_transf_2 PF01909.23 gi|15921027|ref|NP_376696.1| - 1.2e-11 44.7 0.5 1.2e-11 44.7 0.5 1.5 2 0 0 2 2 2 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|15921027|ref|NP_376696.1| - 1.4e-09 37.9 0.6 2.1e-09 37.4 0.6 1.3 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase DNA_pol_B_palm PF14792.6 gi|15921027|ref|NP_376696.1| - 0.0011 19.1 0.0 0.0013 18.9 0.0 1.2 1 0 0 1 1 1 1 DNA polymerase beta palm DUF294 PF03445.13 gi|15921027|ref|NP_376696.1| - 0.037 13.8 0.0 0.048 13.5 0.0 1.3 1 0 0 1 1 1 0 Putative nucleotidyltransferase DUF294 DUF5363 PF17320.2 gi|15921027|ref|NP_376696.1| - 2.2 8.2 4.9 3.6 7.5 1.7 2.4 2 1 0 2 2 2 0 Family of unknown function (DUF5363) HEPN PF05168.14 gi|15921028|ref|NP_376697.1| - 3.1e-28 98.3 4.7 5.8e-28 97.4 4.7 1.4 1 1 0 1 1 1 1 HEPN domain PaREP1 PF05942.11 gi|15921028|ref|NP_376697.1| - 0.0087 16.0 0.3 0.011 15.6 0.3 1.5 1 1 0 1 1 1 1 Archaeal PaREP1/PaREP8 family FlaF PF07309.11 gi|15921028|ref|NP_376697.1| - 0.012 15.6 0.1 0.02 14.9 0.1 1.4 1 0 0 1 1 1 0 Flagellar protein FlaF Ribonuc_red_sm PF00268.21 gi|15921028|ref|NP_376697.1| - 0.027 13.9 0.2 0.03 13.8 0.2 1.2 1 0 0 1 1 1 0 Ribonucleotide reductase, small chain Innexin PF00876.18 gi|15921028|ref|NP_376697.1| - 0.22 10.8 0.0 0.22 10.8 0.0 1.0 1 0 0 1 1 1 0 Innexin cIII PF08134.11 gi|15921028|ref|NP_376697.1| - 0.29 10.9 0.0 0.29 10.9 0.0 1.9 2 0 0 2 2 2 0 cIII protein family HJURP_C PF12347.8 gi|15921028|ref|NP_376697.1| - 0.39 10.8 0.1 0.39 10.8 0.1 1.7 2 0 0 2 2 2 0 Holliday junction regulator protein family C-terminal repeat PaREP1 PF05942.11 gi|15921029|ref|NP_376698.1| - 3.5e-26 91.4 1.3 3.5e-26 91.4 0.1 1.5 2 0 0 2 2 2 1 Archaeal PaREP1/PaREP8 family AA_permease_2 PF13520.6 gi|15921030|ref|NP_376699.1| - 1.2e-27 96.8 42.9 1.6e-27 96.4 42.9 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|15921030|ref|NP_376699.1| - 1.5e-21 76.6 41.5 2.2e-21 76.0 41.5 1.2 1 0 0 1 1 1 1 Amino acid permease ABA_WDS PF02496.16 gi|15921030|ref|NP_376699.1| - 0.038 14.5 0.0 0.11 13.0 0.0 1.7 1 0 0 1 1 1 0 ABA/WDS induced protein CPP1-like PF11833.8 gi|15921030|ref|NP_376699.1| - 1.5 8.4 9.3 1 8.9 4.4 2.9 2 1 0 2 2 2 0 Protein CHAPERONE-LIKE PROTEIN OF POR1-like Orai-1 PF07856.12 gi|15921030|ref|NP_376699.1| - 2.5 7.8 9.1 0.39 10.4 4.7 1.9 2 0 0 2 2 2 0 Mediator of CRAC channel activity NTP_transf_2 PF01909.23 gi|15921033|ref|NP_376702.1| - 4.3e-11 42.9 0.5 5e-11 42.7 0.5 1.2 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|15921033|ref|NP_376702.1| - 5.1e-08 32.9 0.1 6.7e-08 32.5 0.1 1.3 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase DNA_pol_B_palm PF14792.6 gi|15921033|ref|NP_376702.1| - 0.11 12.7 0.0 0.12 12.5 0.0 1.1 1 0 0 1 1 1 0 DNA polymerase beta palm HEPN PF05168.14 gi|15921034|ref|NP_376703.1| - 1.1e-26 93.3 0.1 1.2e-26 93.1 0.1 1.0 1 0 0 1 1 1 1 HEPN domain ABC_tran PF00005.27 gi|15921036|ref|NP_376705.1| - 1.6e-06 28.7 0.0 1.9e-06 28.4 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|15921036|ref|NP_376705.1| - 8.1e-05 22.6 0.2 0.0001 22.3 0.2 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|15921036|ref|NP_376705.1| - 0.0013 18.4 0.0 0.0022 17.7 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|15921036|ref|NP_376705.1| - 0.0021 18.6 0.0 0.0024 18.4 0.0 1.2 1 0 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|15921036|ref|NP_376705.1| - 0.011 15.5 0.1 0.016 15.0 0.1 1.3 1 1 0 1 1 1 0 AAA ATPase domain AAA PF00004.29 gi|15921036|ref|NP_376705.1| - 0.019 15.4 0.0 0.025 15.0 0.0 1.2 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) SMC_N PF02463.19 gi|15921036|ref|NP_376705.1| - 0.024 14.1 0.1 0.039 13.4 0.1 1.4 1 1 0 1 1 1 0 RecF/RecN/SMC N terminal domain Rad17 PF03215.15 gi|15921036|ref|NP_376705.1| - 0.032 14.2 0.0 0.037 14.0 0.0 1.2 1 0 0 1 1 1 0 Rad17 P-loop domain T2SSE PF00437.20 gi|15921036|ref|NP_376705.1| - 0.064 12.3 0.0 0.064 12.3 0.0 1.1 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_27 PF13514.6 gi|15921036|ref|NP_376705.1| - 0.091 12.3 0.0 0.13 11.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain Mg_chelatase PF01078.21 gi|15921036|ref|NP_376705.1| - 0.091 12.1 0.0 0.11 11.8 0.0 1.1 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI PhageP22-tail PF09251.10 gi|15921036|ref|NP_376705.1| - 0.13 10.6 0.0 0.14 10.5 0.0 1.0 1 0 0 1 1 1 0 Salmonella phage P22 tail-spike AAA_16 PF13191.6 gi|15921036|ref|NP_376705.1| - 0.19 12.1 0.0 0.21 11.9 0.0 1.1 1 0 0 1 1 1 0 AAA ATPase domain HTH_27 PF13463.6 gi|15921037|ref|NP_376706.1| - 2.3e-08 34.4 0.1 3.1e-08 34.0 0.1 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.19 gi|15921037|ref|NP_376706.1| - 9.1e-08 31.9 0.9 1.3e-07 31.4 0.9 1.4 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.20 gi|15921037|ref|NP_376706.1| - 1.6e-07 31.1 1.9 1.8e-07 30.9 0.7 1.6 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 gi|15921037|ref|NP_376706.1| - 5.2e-07 29.5 0.0 7.2e-07 29.0 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.6 gi|15921037|ref|NP_376706.1| - 3.1e-06 27.3 0.3 3.7e-06 27.0 0.3 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain HxlR PF01638.17 gi|15921037|ref|NP_376706.1| - 2.4e-05 24.1 0.5 3.1e-05 23.7 0.5 1.1 1 0 0 1 1 1 1 HxlR-like helix-turn-helix MarR PF01047.22 gi|15921037|ref|NP_376706.1| - 4e-05 23.5 0.4 6.6e-05 22.8 0.4 1.3 1 0 0 1 1 1 1 MarR family HTH_20 PF12840.7 gi|15921037|ref|NP_376706.1| - 0.00038 20.5 0.1 0.00054 20.0 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain B-block_TFIIIC PF04182.12 gi|15921037|ref|NP_376706.1| - 0.00042 20.4 0.1 0.0009 19.4 0.1 1.6 1 1 0 1 1 1 1 B-block binding subunit of TFIIIC HTH_36 PF13730.6 gi|15921037|ref|NP_376706.1| - 0.00091 19.1 0.2 0.0014 18.5 0.2 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain S10_plectin PF03501.15 gi|15921037|ref|NP_376706.1| - 0.00098 19.2 0.0 0.0013 18.7 0.0 1.2 1 0 0 1 1 1 1 Plectin/S10 domain HTH_11 PF08279.12 gi|15921037|ref|NP_376706.1| - 0.0011 18.8 0.4 0.0011 18.8 0.4 1.5 2 0 0 2 2 1 1 HTH domain GntR PF00392.21 gi|15921037|ref|NP_376706.1| - 0.0015 18.1 0.4 0.0026 17.4 0.1 1.6 2 0 0 2 2 1 1 Bacterial regulatory proteins, gntR family HTH_24 PF13412.6 gi|15921037|ref|NP_376706.1| - 0.0075 15.8 2.4 0.016 14.7 2.4 1.6 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding Sulfolobus_pRN PF05584.11 gi|15921037|ref|NP_376706.1| - 0.0078 16.2 0.5 0.012 15.6 0.5 1.3 1 0 0 1 1 1 1 Sulfolobus plasmid regulatory protein HTH_12 PF08461.10 gi|15921037|ref|NP_376706.1| - 0.013 15.4 2.4 0.051 13.5 2.4 1.9 1 1 0 1 1 1 0 Ribonuclease R winged-helix domain Rrf2 PF02082.20 gi|15921037|ref|NP_376706.1| - 0.029 14.7 0.1 0.043 14.2 0.1 1.2 1 0 0 1 1 1 0 Transcriptional regulator HTH_45 PF14947.6 gi|15921037|ref|NP_376706.1| - 0.032 14.2 1.1 0.045 13.7 1.1 1.2 1 0 0 1 1 1 0 Winged helix-turn-helix Fe_dep_repress PF01325.19 gi|15921037|ref|NP_376706.1| - 0.065 13.4 0.1 0.13 12.4 0.1 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain DUF4423 PF14394.6 gi|15921037|ref|NP_376706.1| - 0.066 12.9 0.2 0.12 12.1 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4423) AbiEi_4 PF13338.6 gi|15921037|ref|NP_376706.1| - 0.066 13.4 0.2 0.19 11.9 0.1 1.7 2 0 0 2 2 2 0 Transcriptional regulator, AbiEi antitoxin DUF2250 PF10007.9 gi|15921037|ref|NP_376706.1| - 0.073 13.2 0.1 0.12 12.5 0.1 1.4 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) RNA_pol_Rpb2_6 PF00562.28 gi|15921037|ref|NP_376706.1| - 0.078 12.0 0.1 0.079 12.0 0.1 1.0 1 0 0 1 1 1 0 RNA polymerase Rpb2, domain 6 IU_nuc_hydro PF01156.19 gi|15921038|ref|NP_376707.1| - 6.2e-76 255.9 0.0 7.1e-76 255.7 0.0 1.0 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase FAD_binding_4 PF01565.23 gi|15921039|ref|NP_376708.1| - 7.2e-10 38.8 0.0 1.1e-09 38.1 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain AIRC PF00731.20 gi|15921041|ref|NP_376710.1| - 7.5e-68 226.8 0.4 8.4e-68 226.6 0.4 1.0 1 0 0 1 1 1 1 AIR carboxylase Fe-ADH_2 PF13685.6 gi|15921041|ref|NP_376710.1| - 0.00071 19.4 0.0 0.00083 19.1 0.0 1.1 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fes1 PF08609.10 gi|15921041|ref|NP_376710.1| - 0.0041 18.0 0.0 0.12 13.3 0.0 2.2 2 0 0 2 2 2 1 Nucleotide exchange factor Fes1 DAGK_cat PF00781.24 gi|15921041|ref|NP_376710.1| - 0.014 15.1 0.0 0.07 12.7 0.0 1.8 2 0 0 2 2 2 0 Diacylglycerol kinase catalytic domain Fe-ADH PF00465.19 gi|15921041|ref|NP_376710.1| - 0.014 14.2 0.1 0.022 13.6 0.1 1.3 1 0 0 1 1 1 0 Iron-containing alcohol dehydrogenase DUF4419 PF14388.6 gi|15921041|ref|NP_376710.1| - 0.043 13.2 0.0 0.06 12.8 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4419) Glutaredoxin PF00462.24 gi|15921041|ref|NP_376710.1| - 0.096 12.9 0.0 0.21 11.8 0.0 1.6 1 0 0 1 1 1 0 Glutaredoxin ATP-grasp PF02222.22 gi|15921042|ref|NP_376711.1| - 1.2e-49 168.2 0.0 1.8e-49 167.6 0.0 1.2 1 0 0 1 1 1 1 ATP-grasp domain PurK_C PF17769.1 gi|15921042|ref|NP_376711.1| - 3.6e-15 55.4 0.4 6.9e-15 54.5 0.4 1.5 1 0 0 1 1 1 1 Phosphoribosylaminoimidazole carboxylase C-terminal domain ATP-grasp_3 PF02655.14 gi|15921042|ref|NP_376711.1| - 0.00074 19.6 0.0 0.0016 18.5 0.0 1.6 1 1 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.19 gi|15921042|ref|NP_376711.1| - 0.012 15.4 0.0 0.03 14.1 0.0 1.6 2 0 0 2 2 2 0 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DUF3960 PF13142.6 gi|15921042|ref|NP_376711.1| - 0.075 13.2 0.1 0.19 11.9 0.1 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF3960) HTH_1 PF00126.27 gi|15921043|ref|NP_376712.1| - 5e-07 29.6 0.0 7.1e-07 29.1 0.0 1.2 1 0 0 1 1 1 1 Bacterial regulatory helix-turn-helix protein, lysR family ISG65-75 PF11727.8 gi|15921043|ref|NP_376712.1| - 0.0089 15.3 0.7 0.0096 15.2 0.7 1.0 1 0 0 1 1 1 1 Invariant surface glycoprotein MCPsignal PF00015.21 gi|15921043|ref|NP_376712.1| - 0.044 13.6 0.5 0.069 13.0 0.3 1.4 1 1 0 1 1 1 0 Methyl-accepting chemotaxis protein (MCP) signalling domain T3SS_HrpK1 PF16937.5 gi|15921043|ref|NP_376712.1| - 0.12 12.0 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 Type III secretion system translocator protein, HrpF KcnmB2_inactiv PF09303.10 gi|15921044|ref|NP_376713.1| - 0.12 12.2 0.7 0.27 11.1 0.7 1.7 1 0 0 1 1 1 0 KCNMB2, ball and chain domain Pkinase PF00069.25 gi|15921045|ref|NP_376714.1| - 1.6e-27 96.5 0.0 2.9e-27 95.7 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 gi|15921045|ref|NP_376714.1| - 5.3e-11 42.3 0.2 1.7e-10 40.7 0.2 1.8 1 1 0 1 1 1 1 Protein tyrosine kinase ANAPC3 PF12895.7 gi|15921045|ref|NP_376714.1| - 1.3e-08 34.9 6.0 1.7e-08 34.6 2.3 2.5 2 0 0 2 2 2 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_19 PF14559.6 gi|15921045|ref|NP_376714.1| - 1.6e-08 34.9 7.8 7.9e-06 26.3 1.3 3.6 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_12 PF13424.6 gi|15921045|ref|NP_376714.1| - 8.1e-08 32.5 6.7 0.028 14.7 0.0 3.6 3 1 0 3 3 3 3 Tetratricopeptide repeat TPR_14 PF13428.6 gi|15921045|ref|NP_376714.1| - 1e-07 32.1 2.7 0.88 10.6 0.5 4.0 2 1 1 3 3 3 3 Tetratricopeptide repeat TPR_2 PF07719.17 gi|15921045|ref|NP_376714.1| - 3.8e-07 29.7 13.8 0.0011 18.9 0.7 4.7 3 1 1 4 4 4 2 Tetratricopeptide repeat TPR_1 PF00515.28 gi|15921045|ref|NP_376714.1| - 6.8e-07 28.8 11.9 0.00093 18.9 0.2 4.6 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_16 PF13432.6 gi|15921045|ref|NP_376714.1| - 1.5e-06 28.7 4.2 0.11 13.2 0.0 3.5 3 0 0 3 3 3 2 Tetratricopeptide repeat TPR_8 PF13181.6 gi|15921045|ref|NP_376714.1| - 6.3e-06 26.0 11.9 0.0013 18.8 0.2 4.7 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_7 PF13176.6 gi|15921045|ref|NP_376714.1| - 1.5e-05 24.6 4.7 1.4 9.1 0.1 3.9 2 1 1 3 3 3 3 Tetratricopeptide repeat TPR_10 PF13374.6 gi|15921045|ref|NP_376714.1| - 0.00017 21.3 2.9 0.15 12.0 0.0 3.3 3 0 0 3 3 3 2 Tetratricopeptide repeat Wzy_C_2 PF11846.8 gi|15921045|ref|NP_376714.1| - 0.0018 18.2 0.4 0.033 14.1 0.0 2.2 2 0 0 2 2 2 1 Virulence factor membrane-bound polymerase, C-terminal TPR_15 PF13429.6 gi|15921045|ref|NP_376714.1| - 0.0049 16.1 0.5 0.067 12.4 0.2 2.1 2 0 0 2 2 2 1 Tetratricopeptide repeat BTAD PF03704.17 gi|15921045|ref|NP_376714.1| - 0.0057 17.1 0.0 0.13 12.7 0.1 2.7 2 1 0 2 2 2 1 Bacterial transcriptional activator domain DUF1955 PF09205.10 gi|15921045|ref|NP_376714.1| - 0.006 16.3 2.1 0.011 15.5 0.5 2.3 2 0 0 2 2 2 1 Domain of unknown function (DUF1955) PPR PF01535.20 gi|15921045|ref|NP_376714.1| - 0.014 15.6 4.6 6.6 7.2 0.1 4.4 4 0 0 4 4 3 0 PPR repeat TPR_11 PF13414.6 gi|15921045|ref|NP_376714.1| - 0.028 14.1 7.0 1.7 8.4 0.1 3.8 3 0 0 3 3 3 0 TPR repeat TPR_6 PF13174.6 gi|15921045|ref|NP_376714.1| - 0.045 14.4 12.7 4.4 8.2 0.3 5.4 6 0 0 6 6 5 0 Tetratricopeptide repeat YfiO PF13525.6 gi|15921045|ref|NP_376714.1| - 0.064 13.0 4.7 2.9 7.6 0.4 3.6 3 1 1 4 4 4 0 Outer membrane lipoprotein APH PF01636.23 gi|15921045|ref|NP_376714.1| - 0.16 11.8 0.0 18 5.1 0.0 2.4 1 1 1 2 2 2 0 Phosphotransferase enzyme family TPR_20 PF14561.6 gi|15921045|ref|NP_376714.1| - 0.19 12.1 0.8 0.84 10.0 0.4 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat Fis1_TPR_C PF14853.6 gi|15921045|ref|NP_376714.1| - 0.97 9.5 4.0 8.6 6.5 0.2 3.0 1 1 1 2 2 2 0 Fis1 C-terminal tetratricopeptide repeat Ribonuc_L-PSP PF01042.21 gi|15921046|ref|NP_376715.1| - 1.2e-43 148.0 0.1 1.3e-43 147.9 0.1 1.0 1 0 0 1 1 1 1 Endoribonuclease L-PSP DUF3211 PF11485.8 gi|15921047|ref|NP_376716.1| - 2.5e-40 137.8 1.9 2.8e-40 137.7 1.9 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3211) CBS PF00571.28 gi|15921048|ref|NP_376717.1| - 6.8e-50 167.3 10.4 4.6e-12 46.2 0.1 4.1 4 0 0 4 4 4 4 CBS domain IF3_N PF05198.16 gi|15921048|ref|NP_376717.1| - 0.071 13.4 0.4 16 5.9 0.0 3.2 4 0 0 4 4 4 0 Translation initiation factor IF-3, N-terminal domain GDE_C PF06202.14 gi|15921049|ref|NP_376718.1| - 1.6e-126 422.3 0.0 2.2e-126 421.9 0.0 1.1 1 0 0 1 1 1 1 Amylo-alpha-1,6-glucosidase GDE_N PF12439.8 gi|15921049|ref|NP_376718.1| - 1.6e-54 184.6 1.1 2.3e-54 184.1 1.1 1.2 1 0 0 1 1 1 1 Glycogen debranching enzyme N terminal DUF608 PF04685.13 gi|15921049|ref|NP_376718.1| - 1.4e-07 31.1 0.3 2.3e-07 30.4 0.3 1.3 1 0 0 1 1 1 1 Glycosyl-hydrolase family 116, catalytic region Bac_rhamnosid6H PF17389.2 gi|15921049|ref|NP_376718.1| - 2.2e-06 27.1 0.1 3.6e-06 26.5 0.1 1.3 1 0 0 1 1 1 1 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain Glyco_hydro_100 PF12899.7 gi|15921049|ref|NP_376718.1| - 0.0035 16.1 0.3 0.092 11.4 0.0 2.6 2 1 0 2 2 2 1 Alkaline and neutral invertase Glyco_hydro_15 PF00723.21 gi|15921050|ref|NP_376719.1| - 2.9e-19 69.2 0.5 4.7e-16 58.6 0.9 3.0 1 1 1 2 2 2 2 Glycosyl hydrolases family 15 NARP1 PF12569.8 gi|15921050|ref|NP_376719.1| - 0.12 11.2 0.0 0.19 10.6 0.0 1.2 1 0 0 1 1 1 0 NMDA receptor-regulated protein 1 NTP_transferase PF00483.23 gi|15921051|ref|NP_376720.1| - 5.9e-42 144.0 0.0 7.6e-42 143.6 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 gi|15921051|ref|NP_376720.1| - 3.3e-10 39.3 11.4 0.00061 19.4 0.4 4.4 1 1 3 4 4 4 4 Bacterial transferase hexapeptide (six repeats) DUF4954 PF16314.5 gi|15921051|ref|NP_376720.1| - 3.8e-08 32.0 4.0 5.9e-08 31.3 4.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4954) NTP_transf_3 PF12804.7 gi|15921051|ref|NP_376720.1| - 0.0029 18.0 0.0 0.0043 17.4 0.0 1.4 1 0 0 1 1 1 1 MobA-like NTP transferase domain Fucokinase PF07959.12 gi|15921051|ref|NP_376720.1| - 0.0053 15.7 3.0 0.23 10.4 0.4 2.4 1 1 1 2 2 2 2 L-fucokinase Hexapep_2 PF14602.6 gi|15921051|ref|NP_376720.1| - 0.34 10.7 6.0 7.2 6.5 0.3 3.2 3 0 0 3 3 3 0 Hexapeptide repeat of succinyl-transferase Glyco_hydro_57 PF03065.15 gi|15921052|ref|NP_376721.1| - 3.5e-82 276.2 4.5 6.3e-82 275.4 4.5 1.4 1 0 0 1 1 1 1 Glycosyl hydrolase family 57 Polysacc_deac_1 PF01522.21 gi|15921052|ref|NP_376721.1| - 0.016 15.1 0.0 0.17 11.8 0.0 2.4 3 0 0 3 3 3 0 Polysaccharide deacetylase Glyco_transf_5 PF08323.11 gi|15921053|ref|NP_376722.1| - 2e-32 112.8 0.3 3.1e-32 112.2 0.3 1.2 1 0 0 1 1 1 1 Starch synthase catalytic domain Glycos_transf_1 PF00534.20 gi|15921053|ref|NP_376722.1| - 2.3e-32 111.9 0.0 4.1e-32 111.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|15921053|ref|NP_376722.1| - 3.5e-22 79.3 0.0 7.1e-22 78.3 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|15921053|ref|NP_376722.1| - 7.5e-11 42.3 3.1 5.9e-05 23.1 0.0 2.8 3 0 0 3 3 3 2 Glycosyltransferase Family 4 Glyco_trans_4_4 PF13579.6 gi|15921053|ref|NP_376722.1| - 1.6e-08 35.2 0.8 1.1e-07 32.4 0.8 2.2 1 1 0 1 1 1 1 Glycosyl transferase 4-like domain Glyco_trans_1_2 PF13524.6 gi|15921053|ref|NP_376722.1| - 2.8e-05 24.4 0.1 0.00081 19.7 0.0 2.7 2 1 0 2 2 2 1 Glycosyl transferases group 1 AAA_25 PF13481.6 gi|15921053|ref|NP_376722.1| - 0.026 14.1 0.0 0.069 12.7 0.0 1.6 2 0 0 2 2 2 0 AAA domain Glyco_trans_4_2 PF13477.6 gi|15921053|ref|NP_376722.1| - 0.042 13.9 0.1 6.7 6.7 0.0 2.6 3 0 0 3 3 3 0 Glycosyl transferase 4-like Oxidored_molyb PF00174.19 gi|15921054|ref|NP_376723.1| - 1.9e-40 138.3 0.0 2.3e-40 138.0 0.0 1.1 1 0 0 1 1 1 1 Oxidoreductase molybdopterin binding domain Cpn60_TCP1 PF00118.24 gi|15921055|ref|NP_376724.1| - 2e-160 534.7 15.2 2.3e-160 534.5 15.2 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family TRAM PF01938.20 gi|15921055|ref|NP_376724.1| - 0.077 13.0 0.7 0.19 11.8 0.1 1.9 2 0 0 2 2 2 0 TRAM domain DUF3341 PF11821.8 gi|15921056|ref|NP_376725.1| - 0.2 11.3 0.0 0.27 10.9 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3341) CoA_trans PF01144.23 gi|15921057|ref|NP_376726.1| - 1.8e-33 115.8 0.0 2.1e-33 115.6 0.0 1.0 1 0 0 1 1 1 1 Coenzyme A transferase CoA_trans PF01144.23 gi|15921058|ref|NP_376727.1| - 3.3e-24 85.5 0.1 4e-24 85.2 0.1 1.0 1 0 0 1 1 1 1 Coenzyme A transferase Methyltransf_11 PF08241.12 gi|15921059|ref|NP_376728.1| - 6.4e-06 26.7 0.0 5e-05 23.9 0.0 2.2 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|15921059|ref|NP_376728.1| - 0.011 16.4 0.0 0.029 15.0 0.0 1.7 2 0 0 2 2 2 0 Methyltransferase domain Ubie_methyltran PF01209.18 gi|15921059|ref|NP_376728.1| - 0.016 14.6 0.0 0.022 14.1 0.0 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family MTS PF05175.14 gi|15921059|ref|NP_376728.1| - 0.12 11.9 0.0 0.22 11.1 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase small domain CBS PF00571.28 gi|15921060|ref|NP_376729.1| - 3.1e-24 85.2 0.6 4.4e-11 43.0 0.0 2.0 2 0 0 2 2 2 2 CBS domain DSBA PF01323.20 gi|15921061|ref|NP_376730.1| - 4.8e-24 85.2 2.4 4.8e-16 59.1 0.2 2.1 2 0 0 2 2 2 2 DSBA-like thioredoxin domain Thioredoxin_5 PF13743.6 gi|15921061|ref|NP_376730.1| - 3.6e-21 75.7 0.2 6.7e-21 74.8 0.2 1.4 1 1 0 1 1 1 1 Thioredoxin Thioredoxin_4 PF13462.6 gi|15921061|ref|NP_376730.1| - 6.3e-11 42.7 1.1 8.7e-08 32.5 0.0 2.1 1 1 1 2 2 2 2 Thioredoxin Thioredoxin_3 PF13192.6 gi|15921061|ref|NP_376730.1| - 3.8e-05 23.7 0.1 0.00031 20.7 0.1 2.2 2 0 0 2 2 2 1 Thioredoxin domain Thioredoxin_2 PF13098.6 gi|15921061|ref|NP_376730.1| - 0.0039 17.6 0.9 1.1 9.8 0.2 2.4 2 1 0 2 2 2 2 Thioredoxin-like domain HTH_AraC PF00165.23 gi|15921061|ref|NP_376730.1| - 0.1 12.7 0.0 0.24 11.6 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory helix-turn-helix proteins, AraC family ArnB_C PF18677.1 gi|15921062|ref|NP_376731.1| - 6.6e-25 87.0 2.9 1.1e-24 86.3 2.9 1.4 1 0 0 1 1 1 1 Archaellum regulatory network B, C-terminal domain VWA PF00092.28 gi|15921062|ref|NP_376731.1| - 2e-10 41.2 0.0 5.1e-10 39.9 0.0 1.7 1 1 0 1 1 1 1 von Willebrand factor type A domain VWA_3 PF13768.6 gi|15921062|ref|NP_376731.1| - 1.9e-08 34.4 0.0 1.3e-07 31.7 0.0 2.2 2 1 0 2 2 2 1 von Willebrand factor type A domain VWA_2 PF13519.6 gi|15921062|ref|NP_376731.1| - 4.3e-08 33.8 0.0 1.8e-07 31.8 0.0 1.9 2 0 0 2 2 2 1 von Willebrand factor type A domain FHA PF00498.26 gi|15921063|ref|NP_376732.1| - 2.8e-16 59.6 0.0 4.8e-16 58.9 0.0 1.3 1 0 0 1 1 1 1 FHA domain Yop-YscD_cpl PF16697.5 gi|15921063|ref|NP_376732.1| - 2.6e-08 34.1 0.0 4.3e-08 33.4 0.0 1.2 1 0 0 1 1 1 1 Inner membrane component of T3SS, cytoplasmic domain zinc_ribbon_2 PF13240.6 gi|15921063|ref|NP_376732.1| - 3.5e-07 29.7 4.0 5.6e-07 29.1 4.0 1.3 1 0 0 1 1 1 1 zinc-ribbon domain zf-RanBP PF00641.18 gi|15921063|ref|NP_376732.1| - 2.1e-05 23.7 1.4 3.1e-05 23.2 1.4 1.2 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others DZR PF12773.7 gi|15921063|ref|NP_376732.1| - 0.00053 19.9 1.6 0.00096 19.1 1.6 1.4 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|15921063|ref|NP_376732.1| - 0.0068 15.8 4.1 0.012 14.9 4.1 1.4 1 0 0 1 1 1 1 zinc-ribbon domain Vps36-NZF-N PF16988.5 gi|15921063|ref|NP_376732.1| - 0.23 10.9 4.7 1.1 8.7 4.7 2.1 1 1 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain ArnB_C PF18677.1 gi|15921064|ref|NP_376733.1| - 2.1e-29 101.4 10.8 3.6e-29 100.7 10.8 1.4 1 0 0 1 1 1 1 Archaellum regulatory network B, C-terminal domain VWA PF00092.28 gi|15921064|ref|NP_376733.1| - 2.2e-17 63.8 1.5 3e-17 63.4 0.1 1.8 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA_2 PF13519.6 gi|15921064|ref|NP_376733.1| - 2.6e-16 60.2 0.9 3.7e-15 56.5 0.0 2.8 3 0 0 3 3 3 1 von Willebrand factor type A domain VWA_3 PF13768.6 gi|15921064|ref|NP_376733.1| - 1e-11 45.0 0.0 2.5e-11 43.8 0.0 1.7 2 0 0 2 2 2 1 von Willebrand factor type A domain VWA_CoxE PF05762.14 gi|15921064|ref|NP_376733.1| - 0.0037 16.7 0.4 0.0073 15.7 0.0 1.6 2 0 0 2 2 2 1 VWA domain containing CoxE-like protein Sec23_trunk PF04811.15 gi|15921064|ref|NP_376733.1| - 0.0064 16.1 0.0 0.09 12.3 0.0 2.4 2 0 0 2 2 2 1 Sec23/Sec24 trunk domain Flu_M1_C PF08289.11 gi|15921064|ref|NP_376733.1| - 0.025 14.8 2.8 0.35 11.1 1.8 2.5 1 1 1 2 2 2 0 Influenza Matrix protein (M1) C-terminal domain MazE_antitoxin PF04014.18 gi|15921065|ref|NP_376734.1| - 9.9e-10 38.1 1.2 1.2e-09 37.8 1.2 1.1 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin eIF-1a PF01176.19 gi|15921065|ref|NP_376734.1| - 0.00024 20.8 0.6 0.00033 20.4 0.6 1.3 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 PrlF_antitoxin PF15937.5 gi|15921065|ref|NP_376734.1| - 0.0028 18.1 0.2 0.0032 17.9 0.2 1.1 1 0 0 1 1 1 1 prlF antitoxin for toxin YhaV_toxin DUF1989 PF09347.10 gi|15921065|ref|NP_376734.1| - 0.14 11.8 0.0 0.16 11.6 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF1989) DUF402 PF04167.13 gi|15921066|ref|NP_376735.1| - 1.3e-14 54.1 2.4 2.5e-14 53.2 2.4 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF402) RNase_E_G PF10150.9 gi|15921066|ref|NP_376735.1| - 0.0074 15.7 0.1 0.013 15.0 0.1 1.4 1 0 0 1 1 1 1 Ribonuclease E/G family Aconitase PF00330.20 gi|15921067|ref|NP_376736.1| - 1.3e-167 558.5 0.0 1.6e-167 558.2 0.0 1.1 1 0 0 1 1 1 1 Aconitase family (aconitate hydratase) Aconitase_C PF00694.19 gi|15921067|ref|NP_376736.1| - 3.5e-36 124.4 0.0 7.1e-36 123.4 0.0 1.5 1 0 0 1 1 1 1 Aconitase C-terminal domain NTP_transf_2 PF01909.23 gi|15921068|ref|NP_376737.1| - 0.078 13.3 0.0 0.17 12.2 0.0 1.6 1 0 0 1 1 1 0 Nucleotidyltransferase domain DUF2258 PF10015.9 gi|15921069|ref|NP_376738.1| - 2.2e-28 98.2 2.3 2.2e-28 98.2 2.3 2.1 2 1 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2258) Spherulin4 PF12138.8 gi|15921069|ref|NP_376738.1| - 0.0023 17.6 0.2 0.0037 16.9 0.2 1.4 1 0 0 1 1 1 1 Spherulation-specific family 4 IFT57 PF10498.9 gi|15921069|ref|NP_376738.1| - 0.0026 16.8 5.0 0.0041 16.1 5.0 1.4 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 SOAR PF16533.5 gi|15921069|ref|NP_376738.1| - 0.023 14.7 1.4 0.023 14.7 1.4 2.2 2 2 0 2 2 2 0 STIM1 Orai1-activating region LPP PF04728.13 gi|15921069|ref|NP_376738.1| - 0.029 14.8 0.3 0.32 11.4 0.0 2.4 2 0 0 2 2 2 0 Lipoprotein leucine-zipper Laminin_II PF06009.12 gi|15921069|ref|NP_376738.1| - 0.029 14.4 0.7 0.029 14.4 0.7 2.0 1 1 1 2 2 2 0 Laminin Domain II WXG100 PF06013.12 gi|15921069|ref|NP_376738.1| - 0.042 14.1 1.3 0.072 13.3 0.3 1.8 2 0 0 2 2 2 0 Proteins of 100 residues with WXG AcylCoA_dehyd_C PF12186.8 gi|15921069|ref|NP_376738.1| - 0.05 13.7 2.7 0.05 13.7 2.7 2.1 2 0 0 2 2 2 0 Acyl-CoA dehydrogenase C terminal DivIVA PF05103.13 gi|15921069|ref|NP_376738.1| - 0.082 13.0 8.7 0.16 12.0 4.9 2.4 2 0 0 2 2 2 0 DivIVA protein DUF1664 PF07889.12 gi|15921069|ref|NP_376738.1| - 0.14 12.2 2.8 0.12 12.4 1.0 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) HDV_ag PF01517.18 gi|15921069|ref|NP_376738.1| - 0.15 11.9 3.8 1.9 8.3 3.4 2.1 2 0 0 2 2 2 0 Hepatitis delta virus delta antigen SlyX PF04102.12 gi|15921069|ref|NP_376738.1| - 0.19 12.4 3.8 0.28 11.8 0.5 2.4 2 1 0 2 2 2 0 SlyX Hrs_helical PF12210.8 gi|15921069|ref|NP_376738.1| - 0.33 11.5 6.5 1.2 9.7 6.1 2.0 1 1 0 1 1 1 0 Hepatocyte growth factor-regulated tyrosine kinase substrate MscS_porin PF12795.7 gi|15921069|ref|NP_376738.1| - 0.37 10.3 9.3 0.16 11.5 2.6 2.6 2 1 1 3 3 3 0 Mechanosensitive ion channel porin domain FlxA PF14282.6 gi|15921069|ref|NP_376738.1| - 0.72 9.9 4.4 0.64 10.0 1.2 2.2 2 0 0 2 2 2 0 FlxA-like protein FTA4 PF13093.6 gi|15921069|ref|NP_376738.1| - 1 9.2 9.9 0.36 10.7 7.4 1.5 1 1 1 2 2 2 0 Kinetochore complex Fta4 of Sim4 subunit, or CENP-50 ZapB PF06005.12 gi|15921069|ref|NP_376738.1| - 1.2 9.7 9.8 1.5 9.3 7.9 2.2 1 1 0 1 1 1 0 Cell division protein ZapB FTCD_C PF04961.12 gi|15921069|ref|NP_376738.1| - 1.4 8.6 4.4 15 5.3 1.0 2.3 2 0 0 2 2 2 0 Formiminotransferase-cyclodeaminase Phage_GP20 PF06810.11 gi|15921069|ref|NP_376738.1| - 1.8 8.4 11.5 0.13 12.1 5.4 2.1 2 1 1 3 3 3 0 Phage minor structural protein GP20 XhlA PF10779.9 gi|15921069|ref|NP_376738.1| - 2.2 8.5 8.3 0.19 12.0 2.0 2.3 3 0 0 3 3 3 0 Haemolysin XhlA YtxH PF12732.7 gi|15921069|ref|NP_376738.1| - 3.7 8.1 5.9 2.8 8.5 4.0 1.8 2 0 0 2 2 2 0 YtxH-like protein Peptidase_M48 PF01435.18 gi|15921070|ref|NP_376739.1| - 5.4e-33 114.4 0.0 1.1e-32 113.5 0.0 1.4 1 1 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|15921070|ref|NP_376739.1| - 0.027 13.7 0.2 0.027 13.7 0.2 1.8 2 1 0 2 2 2 0 BlaR1 peptidase M56 TrmB PF01978.19 gi|15921071|ref|NP_376740.1| - 3.6e-13 49.2 0.2 5.3e-13 48.6 0.2 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB TFIIE_alpha PF02002.17 gi|15921071|ref|NP_376740.1| - 3e-11 43.1 4.0 3.7e-11 42.8 4.0 1.0 1 0 0 1 1 1 1 TFIIE alpha subunit MarR_2 PF12802.7 gi|15921071|ref|NP_376740.1| - 9.2e-11 41.5 0.0 1.2e-10 41.1 0.0 1.2 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|15921071|ref|NP_376740.1| - 6.4e-08 32.4 0.2 1.1e-07 31.7 0.2 1.5 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|15921071|ref|NP_376740.1| - 8.5e-08 32.6 0.2 1.2e-07 32.1 0.2 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_5 PF01022.20 gi|15921071|ref|NP_376740.1| - 1.4e-07 31.2 0.6 2.6e-07 30.4 0.6 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family Fe_dep_repress PF01325.19 gi|15921071|ref|NP_376740.1| - 9e-07 29.0 0.9 1.8e-06 28.1 0.2 1.8 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain HTH_24 PF13412.6 gi|15921071|ref|NP_376740.1| - 9.2e-06 25.1 0.2 1.4e-05 24.6 0.2 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding DUF4423 PF14394.6 gi|15921071|ref|NP_376740.1| - 9.3e-06 25.4 0.6 1.1e-05 25.2 0.6 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_11 PF08279.12 gi|15921071|ref|NP_376740.1| - 1.1e-05 25.3 0.2 2.1e-05 24.3 0.2 1.5 1 0 0 1 1 1 1 HTH domain HTH_34 PF13601.6 gi|15921071|ref|NP_376740.1| - 1.8e-05 24.8 0.2 3e-05 24.1 0.2 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_IclR PF09339.10 gi|15921071|ref|NP_376740.1| - 2.4e-05 24.1 0.0 3.3e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_20 PF12840.7 gi|15921071|ref|NP_376740.1| - 0.00016 21.6 0.1 0.00026 21.0 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain GntR PF00392.21 gi|15921071|ref|NP_376740.1| - 0.00037 20.1 0.1 0.00065 19.3 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_Crp_2 PF13545.6 gi|15921071|ref|NP_376740.1| - 0.00047 20.1 0.0 0.0017 18.3 0.0 1.8 1 1 1 2 2 2 1 Crp-like helix-turn-helix domain Penicillinase_R PF03965.16 gi|15921071|ref|NP_376740.1| - 0.0013 19.1 0.5 0.0018 18.6 0.5 1.4 1 1 0 1 1 1 1 Penicillinase repressor RuvB_C PF05491.13 gi|15921071|ref|NP_376740.1| - 0.0019 18.0 0.1 0.0033 17.3 0.1 1.4 1 0 0 1 1 1 1 RuvB C-terminal winged helix domain Rrf2 PF02082.20 gi|15921071|ref|NP_376740.1| - 0.0024 18.2 0.2 0.0044 17.3 0.2 1.4 1 0 0 1 1 1 1 Transcriptional regulator HTH_DeoR PF08220.12 gi|15921071|ref|NP_376740.1| - 0.0048 16.6 0.3 0.0098 15.6 0.1 1.5 2 0 0 2 2 1 1 DeoR-like helix-turn-helix domain HTH_36 PF13730.6 gi|15921071|ref|NP_376740.1| - 0.0049 16.8 0.4 0.015 15.2 0.4 1.9 1 1 0 1 1 1 1 Helix-turn-helix domain Dimerisation2 PF16864.5 gi|15921071|ref|NP_376740.1| - 0.011 15.7 0.1 0.016 15.2 0.1 1.2 1 0 0 1 1 1 0 Dimerisation domain LexA_DNA_bind PF01726.16 gi|15921071|ref|NP_376740.1| - 0.012 15.4 0.1 0.024 14.4 0.1 1.6 1 1 0 1 1 1 0 LexA DNA binding domain DUF4122 PF13498.6 gi|15921071|ref|NP_376740.1| - 0.014 15.1 0.7 0.016 14.9 0.7 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4122) DUF2250 PF10007.9 gi|15921071|ref|NP_376740.1| - 0.023 14.8 1.1 0.031 14.4 1.1 1.4 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) DUF749 PF05370.11 gi|15921071|ref|NP_376740.1| - 0.036 14.1 0.4 3.3 7.9 0.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF749) GerE PF00196.19 gi|15921071|ref|NP_376740.1| - 0.037 13.6 0.1 0.071 12.7 0.1 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family RPA_C PF08784.11 gi|15921071|ref|NP_376740.1| - 0.039 14.6 0.0 0.056 14.1 0.0 1.2 1 0 0 1 1 1 0 Replication protein A C terminal EAP30 PF04157.16 gi|15921071|ref|NP_376740.1| - 0.049 12.9 0.4 0.22 10.8 0.0 1.9 2 0 0 2 2 2 0 EAP30/Vps36 family Mnd1 PF03962.15 gi|15921071|ref|NP_376740.1| - 0.052 13.9 4.0 2.2 8.6 0.7 2.4 2 0 0 2 2 2 0 Mnd1 HTH domain HTH_Mga PF08280.11 gi|15921071|ref|NP_376740.1| - 0.056 13.5 0.5 0.11 12.5 0.5 1.5 1 0 0 1 1 1 0 M protein trans-acting positive regulator (MGA) HTH domain FeoC PF09012.10 gi|15921071|ref|NP_376740.1| - 0.099 12.7 0.4 0.16 12.0 0.4 1.4 1 0 0 1 1 1 0 FeoC like transcriptional regulator Amidinotransf PF02274.17 gi|15921071|ref|NP_376740.1| - 0.11 11.5 0.3 0.12 11.4 0.3 1.1 1 0 0 1 1 1 0 Amidinotransferase ATPase PF06745.13 gi|15921072|ref|NP_376741.1| - 1.2e-17 64.0 0.3 1.9e-17 63.4 0.3 1.3 1 0 0 1 1 1 1 KaiC ATPase_2 PF01637.18 gi|15921072|ref|NP_376741.1| - 7.9e-08 32.5 0.1 1e-07 32.2 0.1 1.2 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea GvpD PF07088.11 gi|15921072|ref|NP_376741.1| - 0.00098 17.9 2.9 0.0022 16.7 2.9 1.5 1 1 0 1 1 1 1 GvpD gas vesicle protein AAA_24 PF13479.6 gi|15921072|ref|NP_376741.1| - 0.0011 18.8 0.1 0.005 16.6 0.0 1.8 2 0 0 2 2 2 1 AAA domain ATP-synt_ab PF00006.25 gi|15921072|ref|NP_376741.1| - 0.0011 18.7 0.0 0.019 14.6 0.0 2.3 2 1 0 2 2 2 1 ATP synthase alpha/beta family, nucleotide-binding domain AAA_25 PF13481.6 gi|15921072|ref|NP_376741.1| - 0.0021 17.7 0.1 0.01 15.4 0.1 1.9 1 1 0 1 1 1 1 AAA domain AAA_10 PF12846.7 gi|15921072|ref|NP_376741.1| - 0.0025 16.8 0.0 0.0032 16.4 0.0 1.2 1 0 0 1 1 1 1 AAA-like domain AAA_29 PF13555.6 gi|15921072|ref|NP_376741.1| - 0.011 15.5 0.1 0.041 13.6 0.0 1.9 2 0 0 2 2 2 0 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|15921072|ref|NP_376741.1| - 0.011 16.1 0.0 0.015 15.7 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain Bac_DnaA PF00308.18 gi|15921072|ref|NP_376741.1| - 0.012 15.5 0.7 0.26 11.1 0.0 2.1 1 1 1 2 2 2 0 Bacterial dnaA protein ABC_tran PF00005.27 gi|15921072|ref|NP_376741.1| - 0.014 15.9 0.0 0.024 15.1 0.0 1.5 1 0 0 1 1 1 0 ABC transporter AAA_14 PF13173.6 gi|15921072|ref|NP_376741.1| - 0.015 15.3 0.1 0.036 14.1 0.1 1.7 1 1 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|15921072|ref|NP_376741.1| - 0.016 15.1 0.5 0.2 11.6 0.5 2.1 1 1 0 1 1 1 0 NACHT domain AAA_22 PF13401.6 gi|15921072|ref|NP_376741.1| - 0.06 13.6 0.0 0.12 12.7 0.0 1.5 1 0 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|15921072|ref|NP_376741.1| - 0.076 12.7 0.6 2.5 7.8 0.0 2.1 1 1 0 2 2 2 0 IstB-like ATP binding protein Elong_Iki1 PF10483.9 gi|15921072|ref|NP_376741.1| - 0.11 11.9 0.1 0.14 11.6 0.1 1.2 1 0 0 1 1 1 0 Elongator subunit Iki1 SMC_N PF02463.19 gi|15921072|ref|NP_376741.1| - 0.16 11.4 0.0 0.33 10.4 0.0 1.5 1 0 0 1 1 1 0 RecF/RecN/SMC N terminal domain AAA_30 PF13604.6 gi|15921072|ref|NP_376741.1| - 0.25 11.1 0.0 0.31 10.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain MazE_antitoxin PF04014.18 gi|15921073|ref|NP_376742.1| - 4e-15 55.3 0.3 6.5e-15 54.7 0.3 1.4 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin PrlF_antitoxin PF15937.5 gi|15921073|ref|NP_376742.1| - 1.6e-05 25.3 0.1 1.9e-05 25.0 0.1 1.2 1 0 0 1 1 1 1 prlF antitoxin for toxin YhaV_toxin AbrB-like PF14250.6 gi|15921073|ref|NP_376742.1| - 0.012 15.6 0.1 0.021 14.9 0.1 1.4 1 0 0 1 1 1 0 AbrB-like transcriptional regulator eIF-1a PF01176.19 gi|15921073|ref|NP_376742.1| - 0.035 13.9 0.0 0.069 13.0 0.0 1.5 1 1 0 1 1 1 0 Translation initiation factor 1A / IF-1 DUF4416 PF14385.6 gi|15921073|ref|NP_376742.1| - 0.06 13.3 0.1 0.064 13.2 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4416) SH3_2 PF07653.17 gi|15921073|ref|NP_376742.1| - 0.067 12.9 0.0 0.087 12.5 0.0 1.4 1 0 0 1 1 1 0 Variant SH3 domain DUF1905 PF08922.11 gi|15921073|ref|NP_376742.1| - 0.19 11.8 0.1 0.4 10.8 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF1905) PIN PF01850.21 gi|15921074|ref|NP_376743.1| - 9.3e-18 64.9 4.9 1.1e-17 64.7 4.9 1.0 1 0 0 1 1 1 1 PIN domain PIN_9 PF18477.1 gi|15921074|ref|NP_376743.1| - 1.9e-05 24.9 0.4 0.00037 20.8 0.4 2.0 1 1 0 1 1 1 1 PIN like domain PIN_4 PF13638.6 gi|15921074|ref|NP_376743.1| - 0.00075 19.8 1.6 0.0035 17.6 1.6 1.9 1 1 0 1 1 1 1 PIN domain DUF5615 PF18480.1 gi|15921074|ref|NP_376743.1| - 0.053 13.3 0.0 0.11 12.3 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5615) PIN_3 PF13470.6 gi|15921074|ref|NP_376743.1| - 0.081 13.7 0.3 0.13 13.0 0.3 1.4 1 1 0 1 1 1 0 PIN domain Peripla_BP_2 PF01497.18 gi|15921075|ref|NP_376744.1| - 1.3e-20 74.0 0.0 1.7e-20 73.6 0.0 1.1 1 0 0 1 1 1 1 Periplasmic binding protein 4HB_MCP_1 PF12729.7 gi|15921075|ref|NP_376744.1| - 0.93 9.0 5.2 0.42 10.1 1.5 2.0 2 0 0 2 2 2 0 Four helix bundle sensory module for signal transduction FecCD PF01032.18 gi|15921076|ref|NP_376745.1| - 1.5e-67 227.9 34.5 1.7e-67 227.6 34.5 1.0 1 0 0 1 1 1 1 FecCD transport family ABC-3 PF00950.17 gi|15921076|ref|NP_376745.1| - 2.5e-10 40.3 23.1 3.5e-10 39.8 23.1 1.2 1 0 0 1 1 1 1 ABC 3 transport family ABC_tran PF00005.27 gi|15921077|ref|NP_376746.1| - 4.2e-16 59.7 0.2 3e-15 56.9 0.2 2.0 1 1 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|15921077|ref|NP_376746.1| - 2e-15 57.4 3.0 9.2e-08 32.2 0.3 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|15921077|ref|NP_376746.1| - 4.3e-12 46.0 4.6 8.6e-07 28.6 0.6 2.1 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|15921077|ref|NP_376746.1| - 8.6e-09 36.2 5.3 2.3e-08 34.8 5.3 1.8 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|15921077|ref|NP_376746.1| - 2.4e-07 30.8 2.2 7.4e-05 22.6 0.5 2.3 1 1 1 2 2 2 2 AAA ATPase domain AAA_33 PF13671.6 gi|15921077|ref|NP_376746.1| - 9e-05 22.7 0.0 0.00017 21.8 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|15921077|ref|NP_376746.1| - 0.0001 22.0 0.1 0.00021 21.0 0.1 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain ATPase_2 PF01637.18 gi|15921077|ref|NP_376746.1| - 0.00015 21.8 0.2 0.00024 21.1 0.1 1.5 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_13 PF13166.6 gi|15921077|ref|NP_376746.1| - 0.00026 19.8 0.1 0.00026 19.8 0.1 1.5 2 0 0 2 2 2 1 AAA domain Adeno_IVa2 PF02456.15 gi|15921077|ref|NP_376746.1| - 0.0014 17.5 0.2 0.0022 16.8 0.2 1.3 1 1 0 1 1 1 1 Adenovirus IVa2 protein T2SSE PF00437.20 gi|15921077|ref|NP_376746.1| - 0.0034 16.5 0.0 0.007 15.5 0.0 1.5 1 0 0 1 1 1 1 Type II/IV secretion system protein cobW PF02492.19 gi|15921077|ref|NP_376746.1| - 0.0053 16.4 1.3 0.035 13.7 0.1 2.2 2 1 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain NTPase_1 PF03266.15 gi|15921077|ref|NP_376746.1| - 0.0077 16.2 1.8 0.69 9.8 0.1 2.2 2 0 0 2 2 2 1 NTPase AAA_22 PF13401.6 gi|15921077|ref|NP_376746.1| - 0.0078 16.5 0.1 0.011 16.0 0.1 1.5 1 1 0 1 1 1 1 AAA domain AAA_5 PF07728.14 gi|15921077|ref|NP_376746.1| - 0.0094 15.9 0.2 2.6 8.1 0.0 2.3 2 0 0 2 2 2 1 AAA domain (dynein-related subfamily) RsgA_GTPase PF03193.16 gi|15921077|ref|NP_376746.1| - 0.011 15.6 0.1 0.024 14.5 0.1 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_30 PF13604.6 gi|15921077|ref|NP_376746.1| - 0.011 15.5 0.0 0.019 14.7 0.0 1.3 1 1 0 1 1 1 0 AAA domain AAA_19 PF13245.6 gi|15921077|ref|NP_376746.1| - 0.012 15.9 0.2 0.054 13.8 0.0 1.9 2 1 1 3 3 2 0 AAA domain FtsK_SpoIIIE PF01580.18 gi|15921077|ref|NP_376746.1| - 0.019 14.3 1.0 0.026 13.9 0.4 1.5 2 0 0 2 2 2 0 FtsK/SpoIIIE family AAA PF00004.29 gi|15921077|ref|NP_376746.1| - 0.019 15.4 0.1 0.035 14.5 0.1 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_27 PF13514.6 gi|15921077|ref|NP_376746.1| - 0.023 14.3 0.0 0.04 13.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain NACHT PF05729.12 gi|15921077|ref|NP_376746.1| - 0.03 14.2 0.0 0.053 13.4 0.0 1.4 1 0 0 1 1 1 0 NACHT domain ABC_ATPase PF09818.9 gi|15921077|ref|NP_376746.1| - 0.036 12.9 2.2 0.28 9.9 0.6 2.0 2 0 0 2 2 2 0 Predicted ATPase of the ABC class AAA_14 PF13173.6 gi|15921077|ref|NP_376746.1| - 0.055 13.5 0.5 0.16 12.0 0.5 2.0 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|15921077|ref|NP_376746.1| - 0.057 13.1 0.6 1.8 8.3 0.1 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein DUF3584 PF12128.8 gi|15921077|ref|NP_376746.1| - 0.066 10.7 1.0 0.091 10.3 1.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) AAA_11 PF13086.6 gi|15921077|ref|NP_376746.1| - 0.072 12.9 0.0 0.098 12.4 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|15921077|ref|NP_376746.1| - 0.074 13.4 0.0 0.11 12.9 0.0 1.5 1 1 0 1 1 1 0 AAA ATPase domain AAA_18 PF13238.6 gi|15921077|ref|NP_376746.1| - 0.091 13.3 0.9 0.68 10.5 0.9 2.1 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|15921077|ref|NP_376746.1| - 0.095 13.1 0.1 0.61 10.5 0.0 2.1 2 0 0 2 2 2 0 RNA helicase AAA_24 PF13479.6 gi|15921077|ref|NP_376746.1| - 0.1 12.3 0.2 0.24 11.1 0.0 1.6 2 0 0 2 2 2 0 AAA domain Mg_chelatase PF01078.21 gi|15921077|ref|NP_376746.1| - 0.12 11.7 0.0 0.18 11.2 0.0 1.2 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI gp45-slide_C PF09116.10 gi|15921077|ref|NP_376746.1| - 0.48 10.5 3.0 1.6 8.8 0.4 2.6 2 1 1 3 3 3 0 gp45 sliding clamp, C terminal SpoIIID PF12116.8 gi|15921078|ref|NP_376747.1| - 0.0048 17.0 0.2 0.007 16.4 0.2 1.2 1 0 0 1 1 1 1 Stage III sporulation protein D pEK499_p136 PF18736.1 gi|15921078|ref|NP_376747.1| - 0.025 14.2 0.1 0.03 13.9 0.1 1.1 1 0 0 1 1 1 0 HEPN pEK499 p136 HTH_23 PF13384.6 gi|15921078|ref|NP_376747.1| - 0.03 14.1 0.0 0.05 13.4 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain Peptidase_S66 PF02016.15 gi|15921078|ref|NP_376747.1| - 0.043 13.9 0.0 0.045 13.9 0.0 1.1 1 0 0 1 1 1 0 LD-carboxypeptidase N-terminal domain DUF2073 PF09846.9 gi|15921078|ref|NP_376747.1| - 0.051 13.4 0.1 0.069 13.0 0.1 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2073) DUF3364 PF11844.8 gi|15921078|ref|NP_376747.1| - 0.1 12.9 0.3 0.18 12.1 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3364) MS_channel PF00924.18 gi|15921079|ref|NP_376748.1| - 1.7e-24 86.6 2.7 1.7e-24 86.6 2.7 2.0 2 0 0 2 2 2 1 Mechanosensitive ion channel PaREP1 PF05942.11 gi|15921081|ref|NP_376750.1| - 2.2e-26 92.1 0.8 3e-26 91.6 0.2 1.5 2 0 0 2 2 2 1 Archaeal PaREP1/PaREP8 family DUF2067 PF09840.9 gi|15921081|ref|NP_376750.1| - 0.0086 15.7 0.6 0.018 14.7 0.3 1.6 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2067) DUF772 PF05598.11 gi|15921082|ref|NP_376751.1| - 2.6e-08 33.8 0.1 7.6e-08 32.3 0.1 1.8 1 1 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1 PF01609.21 gi|15921082|ref|NP_376751.1| - 0.013 15.1 0.0 0.029 14.0 0.0 1.6 1 1 0 1 1 1 0 Transposase DDE domain DUF4423 PF14394.6 gi|15921084|ref|NP_376753.1| - 0.016 14.9 0.3 0.029 14.1 0.3 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) DUF3349 PF11829.8 gi|15921084|ref|NP_376753.1| - 0.02 15.7 0.7 1.6 9.6 0.1 2.9 2 1 1 3 3 3 0 Protein of unknown function (DUF3349) SPK PF04435.18 gi|15921084|ref|NP_376753.1| - 0.023 15.1 2.1 0.037 14.4 2.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF545) Phasin PF05597.11 gi|15921084|ref|NP_376753.1| - 0.028 14.4 0.2 0.051 13.6 0.2 1.5 1 0 0 1 1 1 0 Poly(hydroxyalcanoate) granule associated protein (phasin) Stk19 PF10494.9 gi|15921084|ref|NP_376753.1| - 0.057 13.1 0.3 0.067 12.9 0.3 1.2 1 0 0 1 1 1 0 Serine-threonine protein kinase 19 TrmB PF01978.19 gi|15921084|ref|NP_376753.1| - 0.074 13.0 0.2 0.22 11.4 0.1 1.9 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB TBPIP PF07106.13 gi|15921084|ref|NP_376753.1| - 0.079 12.9 2.5 0.21 11.6 2.0 1.9 1 1 1 2 2 2 0 TBPIP/Hop2 winged helix domain AAA_22 PF13401.6 gi|15921085|ref|NP_376754.1| - 3.8e-06 27.2 0.6 0.00025 21.3 0.0 3.1 1 1 1 2 2 2 1 AAA domain AAA_19 PF13245.6 gi|15921085|ref|NP_376754.1| - 1.5e-05 25.4 0.0 8.4e-05 22.9 0.0 2.2 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|15921085|ref|NP_376754.1| - 1.8e-05 25.2 0.5 0.0011 19.4 0.0 3.2 3 1 0 3 3 3 1 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 gi|15921085|ref|NP_376754.1| - 0.00022 21.2 0.0 0.0011 18.9 0.0 2.1 1 1 0 1 1 1 1 NACHT domain AAA_7 PF12775.7 gi|15921085|ref|NP_376754.1| - 0.00023 20.7 0.0 0.00054 19.5 0.0 1.6 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_14 PF13173.6 gi|15921085|ref|NP_376754.1| - 0.00034 20.7 16.5 0.0093 16.0 0.0 4.3 2 1 1 3 3 3 1 AAA domain NB-ARC PF00931.22 gi|15921085|ref|NP_376754.1| - 0.00052 19.3 0.5 0.0023 17.2 0.0 2.2 2 0 0 2 2 2 1 NB-ARC domain AAA_30 PF13604.6 gi|15921085|ref|NP_376754.1| - 0.00069 19.4 0.0 0.002 17.9 0.0 1.7 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|15921085|ref|NP_376754.1| - 0.00083 19.8 0.0 0.0038 17.6 0.0 2.1 1 1 1 2 2 2 1 AAA ATPase domain ABC_tran PF00005.27 gi|15921085|ref|NP_376754.1| - 0.002 18.6 0.8 0.0056 17.2 0.1 2.3 2 1 0 2 2 2 1 ABC transporter TrwB_AAD_bind PF10412.9 gi|15921085|ref|NP_376754.1| - 0.003 16.5 0.0 0.0082 15.1 0.0 1.7 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain MeaB PF03308.16 gi|15921085|ref|NP_376754.1| - 0.0056 15.7 0.1 0.018 14.0 0.0 1.8 2 0 0 2 2 2 1 Methylmalonyl Co-A mutase-associated GTPase MeaB CbiA PF01656.23 gi|15921085|ref|NP_376754.1| - 0.0062 16.6 0.0 0.028 14.5 0.0 2.2 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain cobW PF02492.19 gi|15921085|ref|NP_376754.1| - 0.013 15.1 0.0 0.029 14.0 0.0 1.6 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain T2SSE PF00437.20 gi|15921085|ref|NP_376754.1| - 0.014 14.5 0.0 0.047 12.7 0.0 1.9 1 0 0 1 1 1 0 Type II/IV secretion system protein Zeta_toxin PF06414.12 gi|15921085|ref|NP_376754.1| - 0.019 14.2 0.6 0.052 12.8 0.0 1.9 2 0 0 2 2 2 0 Zeta toxin RsgA_GTPase PF03193.16 gi|15921085|ref|NP_376754.1| - 0.022 14.7 0.7 0.056 13.4 0.0 2.0 2 0 0 2 2 1 0 RsgA GTPase AAA_29 PF13555.6 gi|15921085|ref|NP_376754.1| - 0.027 14.2 0.1 0.059 13.1 0.1 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_17 PF13207.6 gi|15921085|ref|NP_376754.1| - 0.037 14.5 0.1 0.29 11.6 0.0 2.5 2 1 1 3 3 3 0 AAA domain AAA_33 PF13671.6 gi|15921085|ref|NP_376754.1| - 0.04 14.1 0.0 0.085 13.0 0.0 1.6 1 1 0 1 1 1 0 AAA domain ATP-synt_ab PF00006.25 gi|15921085|ref|NP_376754.1| - 0.054 13.1 0.0 0.082 12.6 0.0 1.3 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain MMR_HSR1 PF01926.23 gi|15921085|ref|NP_376754.1| - 0.055 13.6 0.4 0.38 10.8 0.0 2.7 2 1 0 2 2 2 0 50S ribosome-binding GTPase FtsK_SpoIIIE PF01580.18 gi|15921085|ref|NP_376754.1| - 0.068 12.5 0.6 2.9 7.2 0.0 2.8 3 0 0 3 3 3 0 FtsK/SpoIIIE family AAA_11 PF13086.6 gi|15921085|ref|NP_376754.1| - 0.082 12.7 1.4 0.51 10.1 0.0 2.3 2 1 0 2 2 2 0 AAA domain NTPase_1 PF03266.15 gi|15921085|ref|NP_376754.1| - 0.095 12.6 0.1 0.095 12.6 0.1 3.2 3 1 0 3 3 3 0 NTPase AAA_18 PF13238.6 gi|15921085|ref|NP_376754.1| - 0.15 12.6 4.1 0.57 10.7 0.0 3.1 2 2 1 3 3 3 0 AAA domain AAA_5 PF07728.14 gi|15921085|ref|NP_376754.1| - 0.25 11.3 2.0 3.9 7.5 0.0 3.3 2 2 2 4 4 4 0 AAA domain (dynein-related subfamily) DUF2334 PF10096.9 gi|15921085|ref|NP_376754.1| - 0.3 10.7 2.7 0.72 9.5 0.4 2.6 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2334) AA_permease_2 PF13520.6 gi|15921087|ref|NP_376756.1| - 9.7e-41 140.0 55.1 2.6e-40 138.6 55.1 1.7 1 1 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|15921087|ref|NP_376756.1| - 1.3e-27 96.6 55.0 7.9e-27 94.0 55.0 2.0 1 1 0 1 1 1 1 Amino acid permease Spore_permease PF03845.13 gi|15921087|ref|NP_376756.1| - 1.2e-13 50.6 31.7 1.2e-13 50.6 31.7 2.2 1 1 0 2 2 2 1 Spore germination protein RNA_Me_trans PF04252.13 gi|15921088|ref|NP_376757.1| - 0.03 13.9 0.0 0.047 13.2 0.0 1.3 1 0 0 1 1 1 0 Predicted SAM-dependent RNA methyltransferase Transposase_20 PF02371.16 gi|15921089|ref|NP_376758.1| - 3.5e-23 81.7 0.1 6.9e-23 80.8 0.1 1.4 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family DEDD_Tnp_IS110 PF01548.17 gi|15921089|ref|NP_376758.1| - 1.5e-17 63.9 0.0 2.7e-17 63.0 0.0 1.4 1 0 0 1 1 1 1 Transposase FlgN PF05130.12 gi|15921089|ref|NP_376758.1| - 0.0095 16.5 8.4 0.074 13.6 8.6 2.2 1 1 1 2 2 2 1 FlgN protein HHH PF00633.23 gi|15921089|ref|NP_376758.1| - 0.01 15.7 0.2 0.035 14.0 0.2 2.0 1 0 0 1 1 1 0 Helix-hairpin-helix motif CdvA PF18822.1 gi|15921089|ref|NP_376758.1| - 0.014 15.2 11.2 1.1 9.2 0.1 2.5 2 0 0 2 2 2 0 CdvA-like coiled-coil domain HHH_5 PF14520.6 gi|15921089|ref|NP_376758.1| - 0.041 14.5 0.1 0.15 12.7 0.1 2.1 1 0 0 1 1 1 0 Helix-hairpin-helix domain Peptidase_S48 PF03574.15 gi|15921089|ref|NP_376758.1| - 0.062 13.5 0.1 0.12 12.6 0.1 1.4 1 0 0 1 1 1 0 Peptidase family S48 TMCCDC2 PF15844.5 gi|15921089|ref|NP_376758.1| - 0.22 11.5 3.3 0.35 10.8 3.3 1.3 1 0 0 1 1 1 0 Transmembrane and coiled-coil domain-containing protein 2 5_3_exonuc PF01367.20 gi|15921089|ref|NP_376758.1| - 0.8 10.3 7.1 10 6.8 0.0 3.2 2 1 1 3 3 3 0 5'-3' exonuclease, C-terminal SAM fold DUF4709 PF15821.5 gi|15921089|ref|NP_376758.1| - 1.7 9.0 8.2 0.78 10.0 2.1 2.6 1 1 1 2 2 2 0 Domain of unknown function (DUF4709) DDE_Tnp_IS240 PF13610.6 gi|15921092|ref|NP_376761.1| - 4.4e-06 27.0 0.6 6.5e-06 26.4 0.6 1.2 1 0 0 1 1 1 1 DDE domain DDE_Tnp_IS66 PF03050.14 gi|15921092|ref|NP_376761.1| - 0.0048 16.4 0.1 0.0086 15.6 0.1 1.3 1 0 0 1 1 1 1 Transposase IS66 family AA_permease PF00324.21 gi|15921093|ref|NP_376762.1| - 8.8e-20 70.7 47.4 4e-19 68.6 47.4 2.1 1 1 0 1 1 1 1 Amino acid permease AA_permease_2 PF13520.6 gi|15921093|ref|NP_376762.1| - 7.5e-16 58.0 49.9 9.7e-16 57.6 49.9 1.1 1 0 0 1 1 1 1 Amino acid permease SID-1_RNA_chan PF13965.6 gi|15921093|ref|NP_376762.1| - 0.99 7.7 8.9 1.1 7.6 0.2 2.2 2 0 0 2 2 2 0 dsRNA-gated channel SID-1 DUF4199 PF13858.6 gi|15921094|ref|NP_376763.1| - 0.00062 20.2 0.6 0.00062 20.2 0.6 2.3 2 0 0 2 2 2 1 Protein of unknown function (DUF4199) Tmemb_170 PF10190.9 gi|15921094|ref|NP_376763.1| - 0.032 14.6 2.5 0.1 12.9 0.9 2.2 2 0 0 2 2 2 0 Putative transmembrane protein 170 MFS_MOT1 PF16983.5 gi|15921094|ref|NP_376763.1| - 0.56 10.6 9.7 0.27 11.6 5.9 2.2 2 1 0 2 2 2 0 Molybdate transporter of MFS superfamily TraL PF07178.11 gi|15921094|ref|NP_376763.1| - 1.8 9.1 8.6 11 6.6 0.0 3.0 2 1 1 3 3 3 0 TraL protein Sugar_tr PF00083.24 gi|15921095|ref|NP_376764.1| - 5e-28 98.2 31.0 1.3e-21 77.0 11.8 3.3 1 1 1 2 2 2 2 Sugar (and other) transporter MFS_1 PF07690.16 gi|15921095|ref|NP_376764.1| - 6e-28 97.8 43.0 6.4e-17 61.5 21.1 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Bul1_N PF04425.12 gi|15921095|ref|NP_376764.1| - 0.35 9.6 0.1 0.5 9.1 0.1 1.1 1 0 0 1 1 1 0 Bul1 N terminus GATase PF00117.28 gi|15921096|ref|NP_376765.1| - 7e-17 61.8 0.0 9.6e-17 61.4 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|15921096|ref|NP_376765.1| - 6.4e-08 32.6 0.1 2.5e-07 30.7 0.0 1.9 2 0 0 2 2 2 1 Peptidase C26 GATase_3 PF07685.14 gi|15921096|ref|NP_376765.1| - 0.00065 19.4 0.0 0.001 18.7 0.0 1.3 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain DJ-1_PfpI PF01965.24 gi|15921096|ref|NP_376765.1| - 0.0011 18.8 0.0 0.0019 18.1 0.0 1.3 1 0 0 1 1 1 1 DJ-1/PfpI family DUF2482 PF10655.9 gi|15921096|ref|NP_376765.1| - 0.0044 17.5 1.2 0.074 13.6 0.0 2.4 2 1 0 2 2 2 1 Hypothetical protein of unknown function (DUF2482) UPF0180 PF03698.13 gi|15921096|ref|NP_376765.1| - 0.014 15.6 0.0 0.021 15.0 0.0 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0180) HTS PF04204.16 gi|15921096|ref|NP_376765.1| - 0.027 13.4 0.0 0.033 13.1 0.0 1.3 1 0 0 1 1 1 0 Homoserine O-succinyltransferase SNO PF01174.19 gi|15921096|ref|NP_376765.1| - 0.096 12.5 0.0 0.12 12.2 0.0 1.4 1 1 0 1 1 1 0 SNO glutamine amidotransferase family UPF0728 PF15092.6 gi|15921096|ref|NP_376765.1| - 0.11 12.3 0.0 0.17 11.7 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised protein family UPF0728 AAA_14 PF13173.6 gi|15921097|ref|NP_376766.1| - 3.7e-23 82.0 0.1 1e-22 80.6 0.0 1.7 2 0 0 2 2 2 1 AAA domain DUF4143 PF13635.6 gi|15921097|ref|NP_376766.1| - 4.3e-10 39.8 0.9 6.8e-10 39.2 0.1 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF4143) ATPase_2 PF01637.18 gi|15921097|ref|NP_376766.1| - 1.3e-05 25.2 2.3 1.7e-05 24.9 0.1 2.3 3 0 0 3 3 3 1 ATPase domain predominantly from Archaea PuR_N PF09182.10 gi|15921097|ref|NP_376766.1| - 0.021 14.7 0.4 0.67 9.9 0.0 2.5 2 0 0 2 2 2 0 Bacterial purine repressor, N-terminal AAA PF00004.29 gi|15921097|ref|NP_376766.1| - 0.039 14.4 0.0 0.072 13.5 0.0 1.4 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) PaREP1 PF05942.11 gi|15921099|ref|NP_376768.1| - 1.4e-20 73.4 0.0 2e-20 72.8 0.0 1.2 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family DUF871 PF05913.11 gi|15921100|ref|NP_376769.1| - 2e-80 270.7 0.4 2.5e-80 270.4 0.4 1.0 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF871) SAM_LFY PF01698.16 gi|15921100|ref|NP_376769.1| - 0.11 12.5 0.0 0.34 10.9 0.0 1.8 1 0 0 1 1 1 0 Floricaula / Leafy protein SAM domain PIG-L PF02585.17 gi|15921101|ref|NP_376770.1| - 2.3e-29 102.6 0.0 3.4e-29 102.1 0.0 1.2 1 0 0 1 1 1 1 GlcNAc-PI de-N-acetylase DUF608 PF04685.13 gi|15921102|ref|NP_376771.1| - 1.1e-60 205.7 0.1 1e-59 202.5 0.1 2.0 1 1 0 1 1 1 1 Glycosyl-hydrolase family 116, catalytic region Glyco_hydr_116N PF12215.8 gi|15921102|ref|NP_376771.1| - 5.4e-21 75.4 0.0 9.7e-21 74.5 0.0 1.4 1 1 0 1 1 1 1 beta-glucosidase 2, glycosyl-hydrolase family 116 N-term Bac_rhamnosid6H PF17389.2 gi|15921102|ref|NP_376771.1| - 2.3e-06 27.1 0.3 6e-06 25.7 0.0 1.7 2 0 0 2 2 2 1 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain GDE_C PF06202.14 gi|15921102|ref|NP_376771.1| - 0.001 18.1 0.0 0.036 13.0 0.0 2.3 1 1 0 1 1 1 1 Amylo-alpha-1,6-glucosidase Glyco_hydro_52 PF03512.13 gi|15921102|ref|NP_376771.1| - 0.05 12.6 0.0 0.079 11.9 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 52 DUF4965 PF16335.5 gi|15921102|ref|NP_376771.1| - 0.1 12.3 0.0 0.19 11.4 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4965) DUF1129 PF06570.11 gi|15921103|ref|NP_376772.1| - 0.21 11.0 3.1 0.15 11.5 0.8 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF1129) Methyltransf_11 PF08241.12 gi|15921104|ref|NP_376773.1| - 2e-12 47.6 0.0 2.7e-12 47.2 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|15921104|ref|NP_376773.1| - 1.9e-08 34.9 0.0 3.1e-08 34.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|15921104|ref|NP_376773.1| - 0.00028 20.7 0.2 0.001 18.9 0.2 1.8 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|15921104|ref|NP_376773.1| - 0.0044 16.9 0.0 0.0068 16.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|15921104|ref|NP_376773.1| - 0.0047 16.3 0.3 0.0088 15.4 0.3 1.5 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_8 PF05148.15 gi|15921104|ref|NP_376773.1| - 0.0047 16.8 0.1 0.013 15.4 0.1 1.7 1 1 0 1 1 1 1 Hypothetical methyltransferase Methyltransf_12 PF08242.12 gi|15921104|ref|NP_376773.1| - 0.0085 16.8 0.0 0.024 15.4 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_24 PF13578.6 gi|15921104|ref|NP_376773.1| - 0.12 13.4 0.0 0.2 12.7 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain FMN_red PF03358.15 gi|15921105|ref|NP_376774.1| - 2.4e-15 56.6 0.0 3.5e-15 56.1 0.0 1.1 1 0 0 1 1 1 1 NADPH-dependent FMN reductase Flavodoxin_2 PF02525.17 gi|15921105|ref|NP_376774.1| - 0.00083 19.1 0.0 0.002 17.8 0.0 1.7 2 0 0 2 2 2 1 Flavodoxin-like fold Flavodoxin_5 PF12724.7 gi|15921105|ref|NP_376774.1| - 0.0032 17.7 0.0 0.011 16.0 0.0 1.8 1 1 1 2 2 2 1 Flavodoxin domain DUF2862 PF11061.8 gi|15921105|ref|NP_376774.1| - 0.028 14.2 0.0 0.064 13.1 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2862) Radical_SAM PF04055.21 gi|15921106|ref|NP_376775.1| - 2e-16 60.8 0.0 7.8e-16 58.9 0.0 1.9 2 0 0 2 2 2 1 Radical SAM superfamily B12-binding PF02310.19 gi|15921106|ref|NP_376775.1| - 0.0018 18.3 0.0 0.0038 17.2 0.0 1.5 1 0 0 1 1 1 1 B12 binding domain TMP-TENI PF02581.17 gi|15921106|ref|NP_376775.1| - 0.03 13.7 0.0 4.6 6.5 0.0 2.4 2 0 0 2 2 2 0 Thiamine monophosphate synthase Lactamase_B PF00753.27 gi|15921107|ref|NP_376776.1| - 1.8e-22 80.3 0.0 2.4e-22 79.9 0.0 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|15921107|ref|NP_376776.1| - 6.5e-07 29.1 0.0 1.4e-06 28.0 0.0 1.5 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_5 PF14597.6 gi|15921107|ref|NP_376776.1| - 1.7e-06 27.7 0.0 0.0021 17.6 0.0 2.1 2 0 0 2 2 2 2 Metallo-beta-lactamase superfamily Lactamase_B_6 PF16661.5 gi|15921107|ref|NP_376776.1| - 0.00044 19.7 0.0 0.00088 18.8 0.0 1.5 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|15921107|ref|NP_376776.1| - 0.0034 17.3 0.0 0.0049 16.8 0.0 1.5 1 1 0 1 1 1 1 Beta-lactamase superfamily domain DoxD PF04173.13 gi|15921108|ref|NP_376777.1| - 5.1e-65 218.4 8.5 5.6e-65 218.3 8.5 1.0 1 0 0 1 1 1 1 TQO small subunit DoxD DoxX PF07681.12 gi|15921108|ref|NP_376777.1| - 5.2e-06 27.0 2.4 1.4e-05 25.6 2.4 1.7 1 1 0 1 1 1 1 DoxX ANAPC4_WD40 PF12894.7 gi|15921110|ref|NP_376779.1| - 4.5e-05 23.7 0.0 0.0023 18.2 0.0 2.8 3 0 0 3 3 3 1 Anaphase-promoting complex subunit 4 WD40 domain BBS1 PF14779.6 gi|15921110|ref|NP_376779.1| - 0.00037 20.0 5.1 0.86 9.0 0.0 4.2 4 1 1 5 5 5 2 Ciliary BBSome complex subunit 1 Lactonase PF10282.9 gi|15921110|ref|NP_376779.1| - 0.0004 19.7 0.0 0.39 9.9 0.0 2.9 1 1 1 2 2 2 2 Lactonase, 7-bladed beta-propeller Cytochrom_D1 PF02239.16 gi|15921110|ref|NP_376779.1| - 0.00092 17.8 0.0 0.049 12.2 0.0 3.0 1 1 0 1 1 1 1 Cytochrome D1 heme domain DUF1236 PF06823.12 gi|15921110|ref|NP_376779.1| - 0.0042 16.9 1.4 0.041 13.8 0.2 2.9 3 0 0 3 3 3 1 Protein of unknown function (DUF1236) Lgl_C PF08596.10 gi|15921110|ref|NP_376779.1| - 0.034 12.9 0.2 0.11 11.2 0.0 1.9 2 0 0 2 2 2 0 Lethal giant larvae(Lgl) like, C-terminal Utp8 PF10395.9 gi|15921110|ref|NP_376779.1| - 0.13 10.7 1.0 0.4 9.1 0.0 2.2 3 0 0 3 3 3 0 Utp8 family DrsE PF02635.15 gi|15921111|ref|NP_376780.1| - 1.1e-06 29.0 0.0 1.2e-06 28.9 0.0 1.1 1 0 0 1 1 1 1 DsrE/DsrF-like family TusA PF01206.17 gi|15921113|ref|NP_376782.1| - 5.9e-15 54.9 0.0 2.5e-14 52.8 0.0 2.1 2 0 0 2 2 2 1 Sulfurtransferase TusA TusA PF01206.17 gi|15921114|ref|NP_376783.1| - 3.5e-13 49.2 0.1 3.8e-13 49.0 0.1 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA LAGLIDADG_2 PF03161.13 gi|15921114|ref|NP_376783.1| - 0.086 12.9 0.1 0.095 12.7 0.1 1.1 1 0 0 1 1 1 0 LAGLIDADG DNA endonuclease family TusA PF01206.17 gi|15921115|ref|NP_376784.1| - 2.1e-16 59.5 0.1 3.4e-16 58.8 0.1 1.4 1 0 0 1 1 1 1 Sulfurtransferase TusA DUF2249 PF10006.9 gi|15921115|ref|NP_376784.1| - 0.0019 18.0 0.0 0.0031 17.3 0.0 1.5 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2249) COXG PF06240.13 gi|15921115|ref|NP_376784.1| - 0.18 11.5 0.0 0.3 10.8 0.0 1.3 1 0 0 1 1 1 0 Carbon monoxide dehydrogenase subunit G (CoxG) TusA PF01206.17 gi|15921116|ref|NP_376785.1| - 1.5e-19 69.5 0.1 1.7e-19 69.4 0.1 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA DUF2249 PF10006.9 gi|15921116|ref|NP_376785.1| - 0.0018 18.1 0.0 0.0023 17.8 0.0 1.4 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2249) HeH PF12949.7 gi|15921116|ref|NP_376785.1| - 0.049 13.4 0.0 0.099 12.4 0.0 1.6 1 1 0 1 1 1 0 HeH/LEM domain Sulf_transp PF04143.14 gi|15921118|ref|NP_376787.1| - 4.4e-66 223.6 22.0 5.6e-66 223.2 22.0 1.1 1 0 0 1 1 1 1 Sulphur transport DUF2231 PF09990.9 gi|15921118|ref|NP_376787.1| - 1.6 9.2 10.2 0.15 12.5 3.5 2.8 3 1 0 3 3 3 0 Predicted membrane protein (DUF2231) DrsE PF02635.15 gi|15921119|ref|NP_376788.1| - 1.8e-09 38.0 0.1 2e-09 37.8 0.1 1.1 1 0 0 1 1 1 1 DsrE/DsrF-like family DrsE_2 PF13686.6 gi|15921119|ref|NP_376788.1| - 9e-09 35.4 2.6 0.00041 20.3 0.2 2.0 1 1 1 2 2 2 2 DsrE/DsrF/DrsH-like family NPH-II PF12011.8 gi|15921119|ref|NP_376788.1| - 0.095 12.6 0.1 0.17 11.8 0.1 1.4 1 0 0 1 1 1 0 RNA helicase NPH-II NCD1 PF04904.13 gi|15921119|ref|NP_376788.1| - 0.12 12.4 0.1 0.3 11.1 0.0 1.7 2 0 0 2 2 2 0 NAB conserved region 1 (NCD1) Glycos_transf_1 PF00534.20 gi|15921120|ref|NP_376789.1| - 1.1e-20 73.9 0.2 1.3e-20 73.6 0.2 1.0 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|15921120|ref|NP_376789.1| - 1.1e-17 64.7 0.0 1.2e-17 64.6 0.0 1.0 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glycos_transf_2 PF00535.26 gi|15921122|ref|NP_376791.1| - 3e-17 62.9 0.0 6.4e-17 61.9 0.0 1.5 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|15921122|ref|NP_376791.1| - 0.00073 19.5 0.0 0.001 19.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 FeoB_N PF02421.18 gi|15921124|ref|NP_376793.1| - 0.1 12.1 0.0 0.23 11.0 0.0 1.6 1 0 0 1 1 1 0 Ferrous iron transport protein B FAD_binding_7 PF03441.14 gi|15921125|ref|NP_376794.1| - 2.2e-68 229.7 1.8 3e-68 229.3 1.8 1.2 1 0 0 1 1 1 1 FAD binding domain of DNA photolyase DNA_photolyase PF00875.18 gi|15921125|ref|NP_376794.1| - 3.2e-32 111.8 0.0 2.5e-31 108.9 0.0 2.0 2 0 0 2 2 2 1 DNA photolyase DJ-1_PfpI PF01965.24 gi|15921126|ref|NP_376795.1| - 1.8e-51 174.2 0.0 2e-51 174.0 0.0 1.0 1 0 0 1 1 1 1 DJ-1/PfpI family GATase PF00117.28 gi|15921126|ref|NP_376795.1| - 0.017 14.9 0.0 0.021 14.6 0.0 1.2 1 0 0 1 1 1 0 Glutamine amidotransferase class-I GATase_5 PF13507.6 gi|15921126|ref|NP_376795.1| - 0.062 12.4 0.0 0.46 9.5 0.0 1.9 1 1 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain ThiJ_like PF17124.5 gi|15921126|ref|NP_376795.1| - 0.21 11.3 0.0 0.45 10.2 0.0 1.5 1 1 0 1 1 1 0 ThiJ/PfpI family-like MFS_1 PF07690.16 gi|15921127|ref|NP_376796.1| - 1.1e-06 27.9 13.9 2.9e-06 26.4 13.9 1.6 1 1 0 1 1 1 1 Major Facilitator Superfamily EI24 PF07264.11 gi|15921127|ref|NP_376796.1| - 0.046 14.0 11.1 0.064 13.5 11.1 1.2 1 0 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) MFS_1 PF07690.16 gi|15921128|ref|NP_376797.1| - 4.1e-10 39.1 17.6 1.7e-09 37.1 17.6 1.7 1 1 0 1 1 1 1 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|15921128|ref|NP_376797.1| - 3.9e-05 22.7 7.3 5.5e-05 22.2 7.3 1.3 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1_like PF12832.7 gi|15921128|ref|NP_376797.1| - 0.00076 18.4 4.3 0.015 14.2 4.3 2.1 1 1 0 1 1 1 1 MFS_1 like family Phage_holin_2_4 PF16082.5 gi|15921128|ref|NP_376797.1| - 0.026 14.3 0.6 0.064 13.0 0.0 1.9 2 0 0 2 2 2 0 Bacteriophage holin family, superfamily II-like Glycos_transf_1 PF00534.20 gi|15921129|ref|NP_376798.1| - 7.5e-16 58.1 0.0 1.7e-15 57.0 0.0 1.5 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|15921129|ref|NP_376798.1| - 6.5e-09 36.3 0.0 2.4e-08 34.5 0.0 2.0 2 0 0 2 2 2 1 Glycosyl transferases group 1 Phosphorylase PF00343.20 gi|15921129|ref|NP_376798.1| - 2.8e-07 29.2 0.1 6.3e-06 24.8 0.0 2.1 1 1 1 2 2 2 1 Carbohydrate phosphorylase Phage_Mu_Gam PF07352.12 gi|15921129|ref|NP_376798.1| - 0.028 14.3 0.4 0.028 14.3 0.4 2.4 2 0 0 2 2 2 0 Bacteriophage Mu Gam like protein Thermopsin PF05317.11 gi|15921130|ref|NP_376799.1| - 6.4e-60 202.8 22.8 6.4e-60 202.8 22.8 3.3 3 2 0 3 3 3 1 Thermopsin HEPN PF05168.14 gi|15921131|ref|NP_376800.1| - 1.1e-24 86.8 0.7 1.3e-24 86.6 0.7 1.0 1 0 0 1 1 1 1 HEPN domain PaREP1 PF05942.11 gi|15921132|ref|NP_376801.1| - 8.1e-28 96.7 0.4 1.1e-27 96.3 0.4 1.2 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family Antiterm PF03589.13 gi|15921132|ref|NP_376801.1| - 0.019 15.3 0.1 0.11 12.8 0.0 2.0 2 0 0 2 2 2 0 Antitermination protein DUF2663 PF10864.8 gi|15921133|ref|NP_376802.1| - 0.018 15.4 4.0 0.022 15.1 4.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2663) DUF3361 PF11841.8 gi|15921133|ref|NP_376802.1| - 0.021 14.8 0.0 0.021 14.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3361) DUF3333 PF11812.8 gi|15921133|ref|NP_376802.1| - 0.082 13.1 0.1 0.1 12.8 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3333) PIN PF01850.21 gi|15921134|ref|NP_376803.1| - 8.7e-10 39.2 0.1 1.2e-09 38.7 0.1 1.2 1 0 0 1 1 1 1 PIN domain DUF713 PF05218.14 gi|15921134|ref|NP_376803.1| - 0.0031 17.3 0.2 0.0032 17.2 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF713) Toprim_Crpt PF13342.6 gi|15921135|ref|NP_376804.1| - 0.06 13.3 0.1 0.12 12.4 0.1 1.4 1 0 0 1 1 1 0 C-terminal repeat of topoisomerase NDUF_B5 PF09781.9 gi|15921135|ref|NP_376804.1| - 2.1 7.9 6.7 0.48 10.0 3.2 1.7 2 0 0 2 2 2 0 NADH:ubiquinone oxidoreductase, NDUFB5/SGDH subunit Pkinase PF00069.25 gi|15921136|ref|NP_376805.1| - 2e-29 102.8 0.0 2.7e-29 102.3 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 gi|15921136|ref|NP_376805.1| - 6.8e-15 55.1 0.0 1.5e-14 53.9 0.0 1.5 1 1 0 1 1 1 1 Protein tyrosine kinase Kdo PF06293.14 gi|15921136|ref|NP_376805.1| - 0.11 11.8 0.0 0.18 11.2 0.0 1.2 1 0 0 1 1 1 0 Lipopolysaccharide kinase (Kdo/WaaP) family FTA2 PF13095.6 gi|15921136|ref|NP_376805.1| - 0.23 11.0 0.1 0.64 9.6 0.0 1.7 2 0 0 2 2 2 0 Kinetochore Sim4 complex subunit FTA2 MFS_1 PF07690.16 gi|15921137|ref|NP_376806.1| - 2.4e-25 89.2 34.4 9.2e-15 54.4 16.0 2.2 2 0 0 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|15921137|ref|NP_376806.1| - 5.1e-07 28.9 10.3 3.4e-05 22.9 10.3 2.5 1 1 0 1 1 1 1 MFS_1 like family ABC_tran PF00005.27 gi|15921138|ref|NP_376807.1| - 3.4e-35 121.5 0.0 4.4e-35 121.2 0.0 1.1 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|15921138|ref|NP_376807.1| - 1.3e-10 41.6 0.1 7.8e-05 22.6 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|15921138|ref|NP_376807.1| - 1.8e-07 30.8 0.7 2.4e-06 27.2 0.7 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|15921138|ref|NP_376807.1| - 1.3e-05 25.5 0.2 0.00019 21.7 0.2 2.1 1 1 0 1 1 1 1 AAA domain AAA_15 PF13175.6 gi|15921138|ref|NP_376807.1| - 7.8e-05 22.6 0.8 0.057 13.1 0.6 2.2 1 1 0 2 2 2 2 AAA ATPase domain AAA_29 PF13555.6 gi|15921138|ref|NP_376807.1| - 0.00031 20.4 0.1 0.00053 19.7 0.1 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|15921138|ref|NP_376807.1| - 0.00031 21.3 1.6 0.00058 20.4 1.6 1.7 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 gi|15921138|ref|NP_376807.1| - 0.0077 15.8 0.1 0.72 9.4 0.0 2.3 2 0 0 2 2 2 1 AAA domain cobW PF02492.19 gi|15921138|ref|NP_376807.1| - 0.0077 15.8 0.0 0.014 15.0 0.0 1.4 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain RNA12 PF10443.9 gi|15921138|ref|NP_376807.1| - 0.016 14.0 0.0 0.016 13.9 0.0 1.2 1 0 0 1 1 1 0 RNA12 protein AAA PF00004.29 gi|15921138|ref|NP_376807.1| - 0.017 15.6 1.1 3.2 8.2 0.1 2.2 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) G-alpha PF00503.20 gi|15921138|ref|NP_376807.1| - 0.024 13.8 0.0 0.03 13.5 0.0 1.1 1 0 0 1 1 1 0 G-protein alpha subunit TniB PF05621.11 gi|15921138|ref|NP_376807.1| - 0.027 13.9 0.4 0.32 10.4 0.1 2.1 2 0 0 2 2 2 0 Bacterial TniB protein AAA_16 PF13191.6 gi|15921138|ref|NP_376807.1| - 0.028 14.8 0.4 0.063 13.7 0.4 1.7 1 1 0 1 1 1 0 AAA ATPase domain Rad17 PF03215.15 gi|15921138|ref|NP_376807.1| - 0.056 13.4 0.0 0.16 11.9 0.0 1.8 1 1 1 2 2 2 0 Rad17 P-loop domain MobB PF03205.14 gi|15921138|ref|NP_376807.1| - 0.064 13.2 0.0 0.16 11.9 0.0 1.7 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B NB-ARC PF00931.22 gi|15921138|ref|NP_376807.1| - 0.088 12.0 0.2 0.27 10.4 0.2 1.9 1 1 0 1 1 1 0 NB-ARC domain RsgA_GTPase PF03193.16 gi|15921138|ref|NP_376807.1| - 0.088 12.7 0.5 0.45 10.4 0.1 2.3 2 1 1 3 3 3 0 RsgA GTPase AAA_18 PF13238.6 gi|15921138|ref|NP_376807.1| - 0.11 13.1 0.7 0.62 10.6 0.3 2.2 2 1 0 2 2 2 0 AAA domain NPCBM_assoc PF10633.9 gi|15921139|ref|NP_376808.1| - 1.1e-09 38.3 6.6 0.39 11.0 0.4 8.0 9 0 0 9 9 9 2 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.11 gi|15921139|ref|NP_376808.1| - 8.3e-09 35.6 23.3 0.00065 19.9 0.5 6.3 4 1 2 6 6 6 3 CARDB Transglut_C PF00927.22 gi|15921139|ref|NP_376808.1| - 0.0011 19.0 13.1 0.18 12.0 0.4 4.4 4 1 1 5 5 5 2 Transglutaminase family, C-terminal ig like domain Stevor PF17410.2 gi|15921139|ref|NP_376808.1| - 0.041 13.4 0.3 0.073 12.6 0.3 1.4 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame Coatamer_beta_C PF07718.12 gi|15921139|ref|NP_376808.1| - 0.3 11.0 10.8 0.093 12.6 1.5 3.2 4 0 0 4 4 4 0 Coatomer beta C-terminal region RIFIN PF02009.16 gi|15921139|ref|NP_376808.1| - 0.43 10.4 1.4 0.7 9.7 1.4 1.3 1 0 0 1 1 1 0 Rifin TRAP_beta PF05753.14 gi|15921139|ref|NP_376808.1| - 0.9 8.9 16.8 1.6 8.1 0.0 5.8 6 1 0 7 7 7 0 Translocon-associated protein beta (TRAPB) MacB_PCD PF12704.7 gi|15921140|ref|NP_376809.1| - 1.4e-18 68.0 9.6 1.4e-18 68.0 9.6 1.9 2 0 0 2 2 2 1 MacB-like periplasmic core domain FtsX PF02687.21 gi|15921140|ref|NP_376809.1| - 1.5e-13 51.0 8.4 1.5e-13 51.0 8.4 3.6 3 1 0 3 3 3 1 FtsX-like permease family PIN PF01850.21 gi|15921141|ref|NP_376810.1| - 8.7e-10 39.2 0.5 1.1e-09 38.9 0.5 1.0 1 0 0 1 1 1 1 PIN domain SieB PF14163.6 gi|15921141|ref|NP_376810.1| - 0.024 14.1 0.2 0.04 13.4 0.2 1.3 1 0 0 1 1 1 0 Super-infection exclusion protein B EF-hand_2 PF09068.11 gi|15921141|ref|NP_376810.1| - 0.073 13.2 0.0 0.09 12.9 0.0 1.1 1 0 0 1 1 1 0 EF hand TFIID-18kDa PF02269.16 gi|15921141|ref|NP_376810.1| - 0.099 12.7 0.2 0.2 11.7 0.1 1.7 2 0 0 2 2 2 0 Transcription initiation factor IID, 18kD subunit MazE_antitoxin PF04014.18 gi|15921142|ref|NP_376811.1| - 3.8e-12 45.8 0.2 6.5e-12 45.1 0.2 1.4 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin PrlF_antitoxin PF15937.5 gi|15921142|ref|NP_376811.1| - 0.00032 21.1 0.0 0.00041 20.7 0.0 1.2 1 0 0 1 1 1 1 prlF antitoxin for toxin YhaV_toxin HSDR_N_2 PF13588.6 gi|15921142|ref|NP_376811.1| - 0.028 14.4 0.0 0.036 14.0 0.0 1.1 1 0 0 1 1 1 0 Type I restriction enzyme R protein N terminus (HSDR_N) Nha1_C PF08619.10 gi|15921142|ref|NP_376811.1| - 0.14 11.4 0.1 0.14 11.4 0.1 1.1 1 0 0 1 1 1 0 Alkali metal cation/H+ antiporter Nha1 C terminus DUF772 PF05598.11 gi|15921143|ref|NP_376812.1| - 2.6e-08 33.8 0.1 7.6e-08 32.3 0.1 1.8 1 1 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1 PF01609.21 gi|15921143|ref|NP_376812.1| - 0.013 15.1 0.0 0.029 14.0 0.0 1.6 1 1 0 1 1 1 0 Transposase DDE domain PD40 PF07676.12 gi|15921144|ref|NP_376813.1| - 1.4e-05 24.9 0.2 0.00035 20.4 0.1 3.1 2 1 0 2 2 2 1 WD40-like Beta Propeller Repeat DPPIV_N PF00930.21 gi|15921144|ref|NP_376813.1| - 0.013 14.3 0.0 0.029 13.1 0.0 1.5 1 1 1 2 2 2 0 Dipeptidyl peptidase IV (DPP IV) N-terminal region PaREP1 PF05942.11 gi|15921145|ref|NP_376814.1| - 2.8e-24 85.2 0.8 3.3e-24 85.0 0.8 1.1 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family HEPN PF05168.14 gi|15921145|ref|NP_376814.1| - 0.037 14.1 0.1 0.058 13.5 0.1 1.5 1 0 0 1 1 1 0 HEPN domain Sugar_tr PF00083.24 gi|15921146|ref|NP_376815.1| - 1.2e-82 278.2 30.5 1.7e-82 277.7 30.5 1.2 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|15921146|ref|NP_376815.1| - 3.6e-20 72.2 36.8 3.6e-20 72.2 36.8 2.1 1 1 1 2 2 2 1 Major Facilitator Superfamily SepSecS PF05889.13 gi|15921146|ref|NP_376815.1| - 0.12 11.0 0.0 0.22 10.2 0.0 1.3 1 0 0 1 1 1 0 O-phosphoseryl-tRNA(Sec) selenium transferase, SepSecS YtxH PF12732.7 gi|15921146|ref|NP_376815.1| - 0.86 10.2 0.1 0.86 10.2 0.1 2.7 3 0 0 3 3 3 0 YtxH-like protein zinc_ribbon_2 PF13240.6 gi|15921147|ref|NP_376816.1| - 2.6e-12 46.0 15.4 3.1e-06 26.7 3.4 2.2 2 0 0 2 2 2 2 zinc-ribbon domain DZR PF12773.7 gi|15921147|ref|NP_376816.1| - 1.2e-10 41.2 13.7 1.8e-10 40.7 13.7 1.2 1 0 0 1 1 1 1 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|15921147|ref|NP_376816.1| - 7e-07 28.4 12.9 0.0016 17.8 1.6 2.4 2 0 0 2 2 2 2 zinc-ribbon domain ETRAMP PF09716.10 gi|15921147|ref|NP_376816.1| - 0.0022 18.0 0.2 0.004 17.2 0.2 1.5 1 0 0 1 1 1 1 Malarial early transcribed membrane protein (ETRAMP) Nudix_N_2 PF14803.6 gi|15921147|ref|NP_376816.1| - 0.02 14.8 13.8 1.6 8.7 0.1 4.0 3 1 0 3 3 3 0 Nudix N-terminal zinc_ribbon_15 PF17032.5 gi|15921147|ref|NP_376816.1| - 0.052 14.3 12.8 0.51 11.1 2.9 2.6 2 0 0 2 2 2 0 zinc-ribbon family UPF0547 PF10571.9 gi|15921147|ref|NP_376816.1| - 0.073 13.2 14.4 0.14 12.2 2.5 3.1 3 0 0 3 3 3 0 Uncharacterised protein family UPF0547 NMD3 PF04981.13 gi|15921147|ref|NP_376816.1| - 0.082 12.4 4.9 0.12 11.8 4.9 1.3 1 0 0 1 1 1 0 NMD3 family PolC_DP2 PF03833.13 gi|15921147|ref|NP_376816.1| - 0.22 9.4 6.6 0.049 11.5 3.8 1.3 2 0 0 2 2 2 0 DNA polymerase II large subunit DP2 zf-RanBP PF00641.18 gi|15921147|ref|NP_376816.1| - 0.68 9.3 9.2 0.35 10.2 2.1 2.5 2 1 0 2 2 2 0 Zn-finger in Ran binding protein and others DUF2321 PF10083.9 gi|15921147|ref|NP_376816.1| - 0.96 9.1 9.3 24 4.5 9.1 2.8 1 1 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2321) RecR PF02132.15 gi|15921147|ref|NP_376816.1| - 2 8.1 11.1 1.5 8.5 2.4 3.1 3 0 0 3 3 3 0 RecR protein Zn-ribbon_8 PF09723.10 gi|15921147|ref|NP_376816.1| - 2.2 8.4 6.9 17 5.6 3.2 2.7 2 1 0 2 2 2 0 Zinc ribbon domain zf-B_box PF00643.24 gi|15921147|ref|NP_376816.1| - 4.4 7.5 10.5 4.2 7.6 5.2 2.3 1 1 1 2 2 2 0 B-box zinc finger TackOD1 PF18551.1 gi|15921147|ref|NP_376816.1| - 5.1 6.7 9.7 0.42 10.2 1.4 2.3 1 1 1 2 2 2 0 Thaumarchaeal output domain 1 zf-NADH-PPase PF09297.11 gi|15921147|ref|NP_376816.1| - 6.6 6.5 18.4 0.74 9.5 4.1 3.5 2 2 1 3 3 3 0 NADH pyrophosphatase zinc ribbon domain FYVE_2 PF02318.16 gi|15921147|ref|NP_376816.1| - 7.6 6.8 7.0 5.9 7.1 5.8 1.5 1 1 0 1 1 1 0 FYVE-type zinc finger TF_Zn_Ribbon PF08271.12 gi|15921147|ref|NP_376816.1| - 9.6 5.8 12.6 1.5 8.4 1.9 3.0 1 1 1 2 2 2 0 TFIIB zinc-binding ADK_lid PF05191.14 gi|15921147|ref|NP_376816.1| - 9.9 6.2 11.5 1.7 8.7 6.2 2.3 2 0 0 2 2 2 0 Adenylate kinase, active site lid z-alpha PF02295.17 gi|15921148|ref|NP_376817.1| - 0.0013 18.8 0.9 0.0019 18.2 0.1 1.7 2 0 0 2 2 2 1 Adenosine deaminase z-alpha domain MarR PF01047.22 gi|15921148|ref|NP_376817.1| - 0.005 16.7 0.0 0.012 15.6 0.0 1.5 1 0 0 1 1 1 1 MarR family Rrf2 PF02082.20 gi|15921148|ref|NP_376817.1| - 0.0062 16.9 0.0 0.011 16.1 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator MarR_2 PF12802.7 gi|15921148|ref|NP_376817.1| - 0.0082 16.0 0.0 0.055 13.4 0.0 2.0 2 0 0 2 2 2 1 MarR family TrmB PF01978.19 gi|15921148|ref|NP_376817.1| - 0.017 15.0 0.2 0.076 12.9 0.1 2.1 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_Crp_2 PF13545.6 gi|15921148|ref|NP_376817.1| - 0.017 15.1 0.0 0.055 13.4 0.0 1.9 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain FeoC PF09012.10 gi|15921148|ref|NP_376817.1| - 0.018 15.1 0.0 0.056 13.5 0.0 1.9 2 0 0 2 2 2 0 FeoC like transcriptional regulator DUF2250 PF10007.9 gi|15921148|ref|NP_376817.1| - 0.024 14.8 0.3 0.073 13.2 0.1 1.9 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) SelB-wing_2 PF09106.11 gi|15921148|ref|NP_376817.1| - 0.033 14.4 0.0 5.8 7.2 0.0 2.4 2 0 0 2 2 2 0 Elongation factor SelB, winged helix DUF4423 PF14394.6 gi|15921148|ref|NP_376817.1| - 0.046 13.4 0.3 0.16 11.6 0.0 1.8 1 1 1 2 2 2 0 Domain of unknown function (DUF4423) HTH_15 PF12324.8 gi|15921148|ref|NP_376817.1| - 0.099 12.6 0.0 0.19 11.7 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of alkylmercury lyase Cut8 PF08559.10 gi|15921148|ref|NP_376817.1| - 0.15 11.7 0.4 9.9 5.7 0.0 2.1 2 0 0 2 2 2 0 Cut8, nuclear proteasome tether protein RPA_C PF08784.11 gi|15921148|ref|NP_376817.1| - 0.16 12.6 0.0 0.34 11.6 0.0 1.5 1 0 0 1 1 1 0 Replication protein A C terminal DUF1192 PF06698.11 gi|15921148|ref|NP_376817.1| - 0.61 10.2 3.9 3.1 7.9 0.3 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF1192) AAA_19 PF13245.6 gi|15921149|ref|NP_376818.1| - 0.00018 21.9 0.0 0.047 14.0 0.0 3.0 3 0 0 3 3 3 1 AAA domain AAA_22 PF13401.6 gi|15921149|ref|NP_376818.1| - 0.0042 17.4 0.0 0.018 15.3 0.0 2.1 2 0 0 2 2 2 1 AAA domain Img2 PF05046.14 gi|15921149|ref|NP_376818.1| - 0.0066 16.7 0.6 6.9 7.0 0.0 3.0 3 0 0 3 3 3 2 Mitochondrial large subunit ribosomal protein (Img2) AAA_16 PF13191.6 gi|15921149|ref|NP_376818.1| - 0.012 16.0 0.0 0.04 14.3 0.0 1.8 2 0 0 2 2 1 0 AAA ATPase domain NACHT PF05729.12 gi|15921149|ref|NP_376818.1| - 0.013 15.4 0.2 0.42 10.5 0.0 2.4 2 0 0 2 2 2 0 NACHT domain ABC_tran PF00005.27 gi|15921149|ref|NP_376818.1| - 0.033 14.7 0.5 0.12 12.9 0.0 2.1 2 1 0 2 2 2 0 ABC transporter NB-ARC PF00931.22 gi|15921149|ref|NP_376818.1| - 0.035 13.3 0.0 0.072 12.3 0.0 1.5 1 0 0 1 1 1 0 NB-ARC domain AAA_30 PF13604.6 gi|15921149|ref|NP_376818.1| - 0.035 13.8 0.0 0.073 12.8 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_24 PF13479.6 gi|15921149|ref|NP_376818.1| - 0.035 13.8 0.1 0.082 12.6 0.1 1.6 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|15921149|ref|NP_376818.1| - 0.035 14.5 0.1 0.12 12.7 0.0 2.0 2 0 0 2 2 2 0 RNA helicase RsgA_GTPase PF03193.16 gi|15921149|ref|NP_376818.1| - 0.043 13.7 0.5 0.28 11.1 0.0 2.3 3 0 0 3 3 3 0 RsgA GTPase AAA PF00004.29 gi|15921149|ref|NP_376818.1| - 0.052 14.0 0.3 0.19 12.2 0.3 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) NTPase_1 PF03266.15 gi|15921149|ref|NP_376818.1| - 0.09 12.7 1.5 0.18 11.7 0.1 2.1 2 0 0 2 2 2 0 NTPase PaREP1 PF05942.11 gi|15921150|ref|NP_376819.1| - 4.5e-07 29.8 1.2 6.6e-07 29.3 1.2 1.3 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family RXLR PF16810.5 gi|15921150|ref|NP_376819.1| - 0.058 13.8 1.8 0.068 13.6 1.8 1.3 1 0 0 1 1 1 0 RXLR phytopathogen effector protein, Avirulence activity FDX-ACB PF03147.14 gi|15921150|ref|NP_376819.1| - 0.069 13.6 0.2 0.11 13.0 0.2 1.4 1 1 0 1 1 1 0 Ferredoxin-fold anticodon binding domain Acyl-CoA_dh_1 PF00441.24 gi|15921151|ref|NP_376820.1| - 2.3e-21 76.6 0.9 4.2e-21 75.7 0.9 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_2 PF08028.11 gi|15921151|ref|NP_376820.1| - 3.1e-18 66.3 1.0 1.5e-17 64.1 1.0 2.0 1 1 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|15921151|ref|NP_376820.1| - 5e-13 49.1 0.0 9e-13 48.2 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 gi|15921151|ref|NP_376820.1| - 1.3e-09 38.7 0.2 3.5e-09 37.3 0.0 1.9 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Trypsin_2 PF13365.6 gi|15921154|ref|NP_376823.1| - 9.6e-23 81.7 0.9 1.4e-22 81.2 0.9 1.2 1 0 0 1 1 1 1 Trypsin-like peptidase domain PDZ_2 PF13180.6 gi|15921154|ref|NP_376823.1| - 3.9e-14 52.7 0.2 8.4e-14 51.7 0.2 1.6 1 0 0 1 1 1 1 PDZ domain PDZ_6 PF17820.1 gi|15921154|ref|NP_376823.1| - 2.7e-13 49.6 0.1 5e-13 48.7 0.1 1.5 1 0 0 1 1 1 1 PDZ domain Trypsin PF00089.26 gi|15921154|ref|NP_376823.1| - 6e-10 39.3 0.2 5.8e-09 36.1 0.2 2.1 1 1 0 1 1 1 1 Trypsin PDZ PF00595.24 gi|15921154|ref|NP_376823.1| - 1.6e-07 31.5 0.1 3.6e-07 30.4 0.1 1.6 1 0 0 1 1 1 1 PDZ domain Tricorn_PDZ PF14685.6 gi|15921154|ref|NP_376823.1| - 0.0018 18.2 0.1 0.0047 16.9 0.1 1.7 1 0 0 1 1 1 1 Tricorn protease PDZ domain Peptidase_S32 PF05579.13 gi|15921154|ref|NP_376823.1| - 0.0041 16.4 0.6 1 8.5 0.2 2.4 2 1 0 2 2 2 2 Equine arteritis virus serine endopeptidase S32 Peptidase_S46 PF10459.9 gi|15921154|ref|NP_376823.1| - 0.027 13.1 0.3 0.039 12.6 0.3 1.1 1 0 0 1 1 1 0 Peptidase S46 GRASP55_65 PF04495.14 gi|15921154|ref|NP_376823.1| - 0.051 13.9 0.0 0.1 12.9 0.0 1.5 1 0 0 1 1 1 0 GRASP55/65 PDZ-like domain Peptidase_S29 PF02907.15 gi|15921154|ref|NP_376823.1| - 0.1 12.4 0.1 0.29 10.9 0.0 1.7 2 0 0 2 2 2 0 Hepatitis C virus NS3 protease Cas_NE0113 PF09623.10 gi|15921155|ref|NP_376824.1| - 1.3e-05 25.1 0.4 2.9e-05 23.8 0.4 1.7 1 1 0 1 1 1 1 CRISPR-associated protein NE0113 (Cas_NE0113) LDcluster4 PF18306.1 gi|15921155|ref|NP_376824.1| - 0.0029 17.2 0.0 0.0047 16.5 0.0 1.3 1 0 0 1 1 1 1 SLOG cluster4 family Cas_Cas02710 PF09670.10 gi|15921155|ref|NP_376824.1| - 0.049 12.4 0.3 0.12 11.1 0.1 1.6 1 1 1 2 2 2 0 CRISPR-associated protein (Cas_Cas02710) MSL1_dimer PF16801.5 gi|15921155|ref|NP_376824.1| - 0.056 13.2 3.3 0.056 13.2 3.3 2.2 2 0 0 2 2 2 0 Dimerisation domain of Male-specific-Lethal 1 Nit_Regul_Hom PF10126.9 gi|15921155|ref|NP_376824.1| - 0.057 13.4 0.1 0.1 12.6 0.1 1.5 1 0 0 1 1 1 0 Uncharacterized protein, homolog of nitrogen regulatory protein PII Calycin_like PF13944.6 gi|15921155|ref|NP_376824.1| - 0.06 13.7 0.2 0.075 13.3 0.2 1.2 1 0 0 1 1 1 0 Calycin-like beta-barrel domain Toprim PF01751.22 gi|15921155|ref|NP_376824.1| - 0.075 13.3 0.6 0.13 12.5 0.3 1.6 2 0 0 2 2 2 0 Toprim domain IF-2B PF01008.17 gi|15921156|ref|NP_376825.1| - 1.2e-76 257.6 0.1 1.4e-76 257.4 0.1 1.0 1 0 0 1 1 1 1 Initiation factor 2 subunit family Peptidase_M56 PF05569.11 gi|15921157|ref|NP_376826.1| - 0.038 13.2 0.0 0.046 12.9 0.0 1.2 1 0 0 1 1 1 0 BlaR1 peptidase M56 SprT-like PF10263.9 gi|15921157|ref|NP_376826.1| - 0.043 13.7 0.5 0.047 13.6 0.5 1.4 1 1 0 1 1 1 0 SprT-like family DUF4049 PF13258.6 gi|15921157|ref|NP_376826.1| - 0.096 11.7 0.0 0.1 11.7 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4049) Phage_holin_5_2 PF16079.5 gi|15921159|ref|NP_376828.1| - 0.0061 16.9 5.2 0.015 15.6 1.7 2.6 2 1 0 2 2 2 1 Phage holin family Hol44, in holin superfamily V PAP2 PF01569.21 gi|15921159|ref|NP_376828.1| - 9 6.1 22.6 1.6e+02 2.0 22.6 2.6 1 1 0 1 1 1 0 PAP2 superfamily Alpha-amylase PF00128.24 gi|15921160|ref|NP_376829.1| - 8.5e-19 68.3 0.5 1.3e-18 67.7 0.5 1.2 1 0 0 1 1 1 1 Alpha amylase, catalytic domain CBM_48 PF02922.18 gi|15921160|ref|NP_376829.1| - 0.00012 22.4 0.1 0.0016 18.7 0.0 2.5 3 0 0 3 3 3 1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) GHL5 PF14872.6 gi|15921160|ref|NP_376829.1| - 0.034 12.2 0.1 4.5 5.2 0.1 2.0 1 1 0 2 2 2 0 Hypothetical glycoside hydrolase 5 Alpha-amyl_C PF09071.10 gi|15921161|ref|NP_376830.1| - 6.5e-35 118.8 0.5 1.6e-34 117.6 0.5 1.7 1 0 0 1 1 1 1 Alpha-amylase, C terminal Alpha-amylase PF00128.24 gi|15921161|ref|NP_376830.1| - 3.5e-09 36.7 0.3 2.9e-07 30.4 0.3 2.3 1 1 0 1 1 1 1 Alpha amylase, catalytic domain CBM_48 PF02922.18 gi|15921162|ref|NP_376831.1| - 8.8e-20 70.9 0.1 3.3e-19 69.0 0.0 2.1 2 0 0 2 2 2 1 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) Alpha-amylase PF00128.24 gi|15921162|ref|NP_376831.1| - 9.2e-15 55.0 0.3 1e-07 31.9 0.1 3.1 1 1 1 2 2 2 2 Alpha amylase, catalytic domain Pur_ac_phosph_N PF16656.5 gi|15921162|ref|NP_376831.1| - 0.036 14.6 0.0 0.099 13.2 0.0 1.7 1 0 0 1 1 1 0 Purple acid Phosphatase, N-terminal domain GlgX_C PF18390.1 gi|15921162|ref|NP_376831.1| - 0.055 13.3 0.0 0.29 11.0 0.0 2.2 1 1 0 1 1 1 0 Glycogen debranching enzyme C-terminal domain hDGE_amylase PF14701.6 gi|15921162|ref|NP_376831.1| - 0.15 11.1 0.0 0.25 10.4 0.0 1.2 1 0 0 1 1 1 0 Glycogen debranching enzyme, glucanotransferase domain DUF1953 PF09196.10 gi|15921163|ref|NP_376832.1| - 1e-44 150.2 4.6 2.7e-44 148.8 4.6 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF1953) Alpha-amylase PF00128.24 gi|15921163|ref|NP_376832.1| - 1.7e-23 83.7 13.2 4.6e-23 82.3 5.8 3.2 1 1 1 2 2 2 2 Alpha amylase, catalytic domain DUF1086 PF06461.11 gi|15921163|ref|NP_376832.1| - 0.0046 16.8 0.2 0.0089 15.9 0.2 1.5 1 0 0 1 1 1 1 Domain of Unknown Function (DUF1086) Baculo_11_kDa PF06143.11 gi|15921165|ref|NP_376834.1| - 0.031 13.9 0.1 0.031 13.9 0.1 2.6 3 0 0 3 3 3 0 Baculovirus 11 kDa family DUF2569 PF10754.9 gi|15921165|ref|NP_376834.1| - 4.3 7.8 21.9 0.037 14.5 9.9 2.1 1 1 0 2 2 2 0 Protein of unknown function (DUF2569) US6 PF17616.2 gi|15921165|ref|NP_376834.1| - 5.4 6.9 6.4 0.39 10.7 0.5 1.8 2 0 0 2 2 2 0 Viral unique short region 6 Phage_r1t_holin PF16945.5 gi|15921165|ref|NP_376834.1| - 9.2 6.5 7.0 5.3 7.3 0.9 2.3 2 0 0 2 2 2 0 Putative lactococcus lactis phage r1t holin Yip1 PF04893.17 gi|15921165|ref|NP_376834.1| - 9.2 5.9 33.4 0.69 9.6 17.8 2.1 1 1 1 2 2 2 0 Yip1 domain MFS_1 PF07690.16 gi|15921168|ref|NP_376837.1| - 2.1e-22 79.6 42.4 8.6e-13 47.9 13.8 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|15921168|ref|NP_376837.1| - 6.7e-09 35.1 31.7 5.4e-05 22.2 6.9 2.2 1 1 1 2 2 2 2 Sugar (and other) transporter TatD_DNase PF01026.21 gi|15921170|ref|NP_376839.1| - 9.6e-39 133.3 0.6 1.9e-38 132.3 0.6 1.4 1 1 0 1 1 1 1 TatD related DNase adh_short PF00106.25 gi|15921171|ref|NP_376840.1| - 8.9e-46 155.8 0.7 1.7e-45 154.9 0.7 1.4 1 1 0 1 1 1 1 short chain dehydrogenase adh_short_C2 PF13561.6 gi|15921171|ref|NP_376840.1| - 4.3e-36 124.6 0.1 6.6e-36 124.0 0.1 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase Epimerase PF01370.21 gi|15921171|ref|NP_376840.1| - 5.3e-05 22.8 0.3 0.00012 21.6 0.3 2.0 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_10 PF13460.6 gi|15921171|ref|NP_376840.1| - 5.4e-05 23.2 0.1 0.00039 20.4 0.1 2.1 1 1 0 1 1 1 1 NAD(P)H-binding KR PF08659.10 gi|15921171|ref|NP_376840.1| - 0.00057 19.8 0.2 0.024 14.6 0.2 2.4 1 1 0 1 1 1 1 KR domain THF_DHG_CYH_C PF02882.19 gi|15921171|ref|NP_376840.1| - 0.0042 16.4 0.1 0.0077 15.6 0.1 1.4 1 0 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Kelch_1 PF01344.25 gi|15921172|ref|NP_376841.1| - 6e-24 83.4 24.9 3.6e-06 26.4 0.0 6.6 6 0 0 6 6 6 5 Kelch motif Kelch_6 PF13964.6 gi|15921172|ref|NP_376841.1| - 5.7e-20 70.9 34.1 5e-07 29.8 0.7 7.0 4 1 3 7 7 7 5 Kelch motif Kelch_4 PF13418.6 gi|15921172|ref|NP_376841.1| - 1.3e-12 47.5 20.1 0.0015 18.5 0.1 6.1 6 0 0 6 6 6 5 Galactose oxidase, central domain Kelch_3 PF13415.6 gi|15921172|ref|NP_376841.1| - 5.5e-12 45.7 18.2 5.8e-05 23.3 0.2 6.6 6 0 0 6 6 6 4 Galactose oxidase, central domain fn3 PF00041.21 gi|15921172|ref|NP_376841.1| - 3.3e-10 40.2 16.4 5.7e-06 26.6 1.9 4.2 4 2 0 4 4 4 2 Fibronectin type III domain Kelch_2 PF07646.15 gi|15921172|ref|NP_376841.1| - 3.2e-09 36.4 16.6 0.44 10.6 0.0 6.8 6 0 0 6 6 6 4 Kelch motif Kelch_5 PF13854.6 gi|15921172|ref|NP_376841.1| - 4.3e-08 33.0 30.0 0.0051 16.8 1.4 6.6 6 0 0 6 6 6 3 Kelch motif Interfer-bind PF09294.10 gi|15921172|ref|NP_376841.1| - 0.022 15.1 2.7 0.13 12.6 0.1 2.7 2 1 0 2 2 2 0 Interferon-alpha/beta receptor, fibronectin type III DUF2369 PF10179.9 gi|15921172|ref|NP_376841.1| - 0.06 13.7 2.2 5.7 7.4 0.0 3.2 2 1 1 3 3 3 0 Uncharacterised conserved protein (DUF2369) Cadherin-like PF12733.7 gi|15921172|ref|NP_376841.1| - 3.2 8.3 14.2 0.52 10.9 1.7 4.4 2 1 1 3 3 3 0 Cadherin-like beta sandwich domain STT3 PF02516.14 gi|15921173|ref|NP_376842.1| - 2.9e-13 49.6 36.0 8.9e-13 48.0 36.0 1.8 1 1 0 1 1 1 1 Oligosaccharyl transferase STT3 subunit Nop10p PF04135.12 gi|15921174|ref|NP_376843.1| - 4.8e-26 90.6 0.9 5.2e-26 90.4 0.9 1.0 1 0 0 1 1 1 1 Nucleolar RNA-binding protein, Nop10p family RecR PF02132.15 gi|15921174|ref|NP_376843.1| - 0.0015 18.0 0.9 0.0021 17.6 0.9 1.2 1 0 0 1 1 1 1 RecR protein EIF_2_alpha PF07541.12 gi|15921175|ref|NP_376844.1| - 8.7e-25 87.1 0.0 8.7e-25 87.1 0.0 2.1 2 1 0 2 2 2 1 Eukaryotic translation initiation factor 2 alpha subunit S1 PF00575.23 gi|15921175|ref|NP_376844.1| - 9.1e-13 48.4 0.2 9.1e-13 48.4 0.2 2.4 3 0 0 3 3 3 1 S1 RNA binding domain TINF2_N PF14973.6 gi|15921175|ref|NP_376844.1| - 0.016 15.6 0.3 0.039 14.3 0.3 1.6 1 0 0 1 1 1 0 TERF1-interacting nuclear factor 2 N-terminus AAA_11 PF13086.6 gi|15921175|ref|NP_376844.1| - 0.095 12.5 1.5 0.13 12.1 1.5 1.3 1 0 0 1 1 1 0 AAA domain DUF16 PF01519.16 gi|15921175|ref|NP_376844.1| - 0.098 13.2 4.4 0.083 13.4 2.6 1.8 2 0 0 2 2 2 0 Protein of unknown function DUF16 Ribosomal_S27e PF01667.17 gi|15921176|ref|NP_376845.1| - 2.9e-22 78.1 1.6 3.3e-22 77.9 1.6 1.1 1 0 0 1 1 1 1 Ribosomal protein S27 TF_Zn_Ribbon PF08271.12 gi|15921176|ref|NP_376845.1| - 1.4e-05 24.5 0.8 1.8e-05 24.2 0.8 1.2 1 0 0 1 1 1 1 TFIIB zinc-binding zinc_ribbon_2 PF13240.6 gi|15921176|ref|NP_376845.1| - 0.00023 20.8 1.3 0.062 13.0 0.3 2.3 2 0 0 2 2 2 1 zinc-ribbon domain DUF35_N PF12172.8 gi|15921176|ref|NP_376845.1| - 0.0004 20.2 1.0 0.12 12.3 0.2 2.2 2 0 0 2 2 2 1 Rubredoxin-like zinc ribbon domain (DUF35_N) DNA_RNApol_7kD PF03604.13 gi|15921176|ref|NP_376845.1| - 0.002 17.8 3.3 0.038 13.7 3.1 2.3 1 1 1 2 2 2 1 DNA directed RNA polymerase, 7 kDa subunit zf-ribbon_3 PF13248.6 gi|15921176|ref|NP_376845.1| - 0.0029 17.0 2.0 0.08 12.4 0.2 2.2 2 0 0 2 2 2 1 zinc-ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|15921176|ref|NP_376845.1| - 0.004 17.1 1.6 0.0054 16.7 1.6 1.2 1 0 0 1 1 1 1 Transposase zinc-ribbon domain zf-LSD1 PF06943.12 gi|15921176|ref|NP_376845.1| - 0.0051 16.6 4.1 0.017 15.0 0.7 2.3 2 0 0 2 2 2 1 LSD1 zinc finger DUF951 PF06107.11 gi|15921176|ref|NP_376845.1| - 0.0054 16.6 0.3 2.3 8.2 0.0 2.3 1 1 1 2 2 2 1 Bacterial protein of unknown function (DUF951) DZR PF12773.7 gi|15921176|ref|NP_376845.1| - 0.0056 16.7 1.2 0.0095 15.9 1.2 1.4 1 1 0 1 1 1 1 Double zinc ribbon TFIIS_C PF01096.18 gi|15921176|ref|NP_376845.1| - 0.0065 16.3 3.1 0.36 10.7 3.1 2.3 1 1 0 1 1 1 1 Transcription factor S-II (TFIIS) HypA PF01155.19 gi|15921176|ref|NP_376845.1| - 0.0086 16.1 0.1 0.0091 16.0 0.1 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF3797 PF12677.7 gi|15921176|ref|NP_376845.1| - 0.011 15.6 1.8 0.13 12.2 0.6 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) zinc_ribbon_6 PF14599.6 gi|15921176|ref|NP_376845.1| - 0.011 15.7 0.2 0.016 15.2 0.2 1.2 1 0 0 1 1 1 0 Zinc-ribbon Zn_Tnp_IS1 PF03811.13 gi|15921176|ref|NP_376845.1| - 0.019 14.7 1.2 1.4 8.7 0.1 2.1 1 1 1 2 2 2 0 InsA N-terminal domain Zn-ribbon_8 PF09723.10 gi|15921176|ref|NP_376845.1| - 0.027 14.6 2.1 0.067 13.3 2.0 1.6 1 1 1 2 2 2 0 Zinc ribbon domain PADR1 PF08063.12 gi|15921176|ref|NP_376845.1| - 0.035 13.9 1.8 0.29 10.9 0.2 2.0 1 1 1 2 2 2 0 PADR1 (NUC008) domain zf-C4_Topoisom PF01396.19 gi|15921176|ref|NP_376845.1| - 0.043 13.6 1.7 2.8 7.8 0.1 2.2 2 0 0 2 2 2 0 Topoisomerase DNA binding C4 zinc finger zf-ISL3 PF14690.6 gi|15921176|ref|NP_376845.1| - 0.052 14.2 3.0 0.27 12.0 2.1 2.0 1 1 1 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Lar_restr_allev PF14354.6 gi|15921176|ref|NP_376845.1| - 0.053 13.9 0.6 0.072 13.5 0.6 1.2 1 0 0 1 1 1 0 Restriction alleviation protein Lar zf-NADH-PPase PF09297.11 gi|15921176|ref|NP_376845.1| - 0.071 12.8 2.6 2.2 8.0 2.7 2.2 1 1 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain eIF-5_eIF-2B PF01873.17 gi|15921176|ref|NP_376845.1| - 0.072 13.0 0.3 0.079 12.8 0.3 1.2 1 0 0 1 1 1 0 Domain found in IF2B/IF5 zinc_ribbon_4 PF13717.6 gi|15921176|ref|NP_376845.1| - 0.075 13.0 4.2 1.1 9.3 0.5 2.5 1 1 1 2 2 2 0 zinc-ribbon domain MCM_OB PF17207.3 gi|15921176|ref|NP_376845.1| - 0.076 12.9 0.2 0.081 12.8 0.2 1.2 1 0 0 1 1 1 0 MCM OB domain DUF1610 PF07754.11 gi|15921176|ref|NP_376845.1| - 0.097 12.7 8.1 1.3 9.1 3.8 2.5 2 1 0 2 2 2 0 Domain of unknown function (DUF1610) DNA_ligase_ZBD PF03119.16 gi|15921176|ref|NP_376845.1| - 0.11 12.5 2.2 5.7 7.0 0.0 2.2 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain Zn_ribbon_SprT PF17283.2 gi|15921176|ref|NP_376845.1| - 0.18 11.7 2.7 6.6 6.7 0.2 2.2 2 0 0 2 2 2 0 SprT-like zinc ribbon domain zf-RRN7 PF11781.8 gi|15921176|ref|NP_376845.1| - 0.18 11.5 1.8 2.8 7.7 0.1 2.1 2 0 0 2 2 2 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 zf-ACC PF17848.1 gi|15921176|ref|NP_376845.1| - 0.2 11.8 3.2 2.9 8.0 0.9 2.2 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain CpXC PF14353.6 gi|15921176|ref|NP_376845.1| - 0.23 11.5 2.1 1.7 8.7 0.2 2.1 1 1 1 2 2 2 0 CpXC protein RNA_pol_N PF01194.17 gi|15921176|ref|NP_376845.1| - 0.32 11.3 0.3 0.32 11.3 0.3 1.8 2 0 0 2 2 2 0 RNA polymerases N / 8 kDa subunit DUF2752 PF10825.8 gi|15921176|ref|NP_376845.1| - 0.71 10.0 3.2 3.4 7.8 0.1 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF2752) Mu-like_Com PF10122.9 gi|15921176|ref|NP_376845.1| - 1.1 8.8 5.6 0.45 10.0 0.8 2.2 1 1 1 2 2 2 0 Mu-like prophage protein Com zinc_ribbon_5 PF13719.6 gi|15921176|ref|NP_376845.1| - 3.6 7.4 6.7 12 5.8 3.9 2.5 2 1 0 2 2 2 0 zinc-ribbon domain Ribosomal_L44 PF00935.19 gi|15921177|ref|NP_376846.1| - 7.7e-29 100.0 8.8 1.2e-28 99.4 8.8 1.3 1 0 0 1 1 1 1 Ribosomal protein L44 zf-ribbon_3 PF13248.6 gi|15921177|ref|NP_376846.1| - 0.011 15.1 1.5 0.51 9.8 0.2 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_13 PF09855.9 gi|15921177|ref|NP_376846.1| - 0.03 14.5 0.9 0.89 9.8 0.0 2.2 2 0 0 2 2 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) RNA_POL_M_15KD PF02150.16 gi|15921177|ref|NP_376846.1| - 0.05 13.5 0.9 2.3 8.2 0.1 2.2 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit zinc_ribbon_2 PF13240.6 gi|15921177|ref|NP_376846.1| - 0.057 13.2 4.1 2.9 7.7 0.3 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Cys_rich_KTR PF14205.6 gi|15921177|ref|NP_376846.1| - 0.064 13.1 2.5 0.58 10.0 0.1 2.2 2 0 0 2 2 2 0 Cysteine-rich KTR CxC5 PF18718.1 gi|15921177|ref|NP_376846.1| - 0.078 13.1 6.3 0.16 12.0 1.0 2.1 1 1 1 2 2 2 0 CxC5 like cysteine cluster associated with KDZ transposases zinc_ribbon_4 PF13717.6 gi|15921177|ref|NP_376846.1| - 0.13 12.2 4.9 1 9.3 0.3 2.3 2 0 0 2 2 2 0 zinc-ribbon domain Ribosomal_L33 PF00471.20 gi|15921177|ref|NP_376846.1| - 0.17 12.4 0.9 0.17 12.4 0.9 2.9 2 1 1 3 3 3 0 Ribosomal protein L33 zinc_ribbon_15 PF17032.5 gi|15921177|ref|NP_376846.1| - 0.32 11.8 4.2 3.5 8.4 4.0 2.1 1 1 1 2 2 2 0 zinc-ribbon family zf-Mss51 PF13824.6 gi|15921177|ref|NP_376846.1| - 0.6 10.2 3.4 3.9 7.6 3.7 1.9 1 1 1 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 Get5_bdg PF16843.5 gi|15921178|ref|NP_376847.1| - 0.12 11.9 1.1 0.25 10.8 0.3 2.0 2 0 0 2 2 2 0 Binding domain to Get4 on Get5, Golgi to ER traffic protein DNA_primase_S PF01896.19 gi|15921179|ref|NP_376848.1| - 2.7e-11 43.9 0.0 1.8e-05 24.8 0.0 2.5 2 0 0 2 2 2 2 DNA primase small subunit PCNA_N PF00705.18 gi|15921180|ref|NP_376849.1| - 8.7e-12 44.9 0.0 1.4e-11 44.2 0.0 1.3 1 0 0 1 1 1 1 Proliferating cell nuclear antigen, N-terminal domain PCNA_C PF02747.15 gi|15921180|ref|NP_376849.1| - 6.4e-08 32.8 0.6 2.8e-05 24.3 0.0 3.3 2 1 1 3 3 3 1 Proliferating cell nuclear antigen, C-terminal domain Rad1 PF02144.16 gi|15921180|ref|NP_376849.1| - 7.6e-05 21.9 0.1 0.022 13.8 0.0 2.1 1 1 1 2 2 2 2 Repair protein Rad1/Rec1/Rad17 Rad9 PF04139.13 gi|15921180|ref|NP_376849.1| - 0.0017 17.8 0.0 0.002 17.6 0.0 1.3 1 1 0 1 1 1 1 Rad9 Chalcone_2 PF16035.5 gi|15921180|ref|NP_376849.1| - 0.12 12.2 0.0 0.18 11.5 0.0 1.2 1 0 0 1 1 1 0 Chalcone isomerase like ATP_bind_1 PF03029.17 gi|15921181|ref|NP_376850.1| - 1.4e-54 185.5 0.0 1.6e-54 185.3 0.0 1.0 1 0 0 1 1 1 1 Conserved hypothetical ATP binding protein CLP1_P PF16575.5 gi|15921181|ref|NP_376850.1| - 3e-08 33.7 0.0 0.0037 17.1 0.0 3.1 3 0 0 3 3 3 2 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_18 PF13238.6 gi|15921181|ref|NP_376850.1| - 0.00011 22.8 0.0 0.0002 21.9 0.0 1.6 1 1 0 1 1 1 1 AAA domain PduV-EutP PF10662.9 gi|15921181|ref|NP_376850.1| - 0.00013 21.7 0.0 0.024 14.4 0.0 3.0 2 1 1 3 3 3 1 Ethanolamine utilisation - propanediol utilisation SRP54 PF00448.22 gi|15921181|ref|NP_376850.1| - 0.00014 21.5 0.0 0.0073 15.9 0.0 2.2 2 0 0 2 2 2 1 SRP54-type protein, GTPase domain AAA_16 PF13191.6 gi|15921181|ref|NP_376850.1| - 0.00015 22.2 0.0 0.00048 20.6 0.0 1.9 1 1 0 1 1 1 1 AAA ATPase domain Septin PF00735.18 gi|15921181|ref|NP_376850.1| - 0.00042 19.7 0.2 0.33 10.2 0.1 2.7 2 1 0 2 2 2 1 Septin DUF87 PF01935.17 gi|15921181|ref|NP_376850.1| - 0.00094 19.3 0.0 0.0019 18.3 0.0 1.6 1 1 0 1 1 1 1 Helicase HerA, central domain RsgA_GTPase PF03193.16 gi|15921181|ref|NP_376850.1| - 0.0011 18.9 0.6 1.5 8.7 0.2 3.7 2 2 0 2 2 2 1 RsgA GTPase AAA_22 PF13401.6 gi|15921181|ref|NP_376850.1| - 0.0016 18.7 0.1 0.015 15.6 0.1 2.3 1 1 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|15921181|ref|NP_376850.1| - 0.002 17.9 0.0 0.0031 17.3 0.0 1.2 1 0 0 1 1 1 1 AAA domain NACHT PF05729.12 gi|15921181|ref|NP_376850.1| - 0.0025 17.8 0.0 0.0054 16.7 0.0 1.5 1 0 0 1 1 1 1 NACHT domain MMR_HSR1 PF01926.23 gi|15921181|ref|NP_376850.1| - 0.0044 17.1 0.1 0.033 14.3 0.1 2.1 1 1 0 1 1 1 1 50S ribosome-binding GTPase cobW PF02492.19 gi|15921181|ref|NP_376850.1| - 0.0056 16.3 0.0 0.1 12.1 0.0 2.2 2 1 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain GTP_EFTU PF00009.27 gi|15921181|ref|NP_376850.1| - 0.0081 15.7 0.0 1 8.8 0.1 2.8 2 1 0 2 2 2 1 Elongation factor Tu GTP binding domain AAA_28 PF13521.6 gi|15921181|ref|NP_376850.1| - 0.012 15.9 0.1 0.032 14.5 0.1 1.8 1 1 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|15921181|ref|NP_376850.1| - 0.012 16.0 0.0 0.23 11.8 0.0 2.5 2 0 0 2 2 2 0 RNA helicase NTPase_1 PF03266.15 gi|15921181|ref|NP_376850.1| - 0.014 15.3 0.4 0.077 12.9 0.1 2.3 2 1 0 2 2 2 0 NTPase MeaB PF03308.16 gi|15921181|ref|NP_376850.1| - 0.014 14.4 0.0 0.075 12.0 0.0 1.9 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB FeoB_N PF02421.18 gi|15921181|ref|NP_376850.1| - 0.015 14.8 0.0 0.44 10.1 0.0 2.6 3 0 0 3 3 3 0 Ferrous iron transport protein B ArsA_ATPase PF02374.15 gi|15921181|ref|NP_376850.1| - 0.017 14.3 0.0 0.059 12.5 0.0 1.7 1 1 1 2 2 2 0 Anion-transporting ATPase KTI12 PF08433.10 gi|15921181|ref|NP_376850.1| - 0.023 14.1 0.0 0.055 12.9 0.0 1.6 2 0 0 2 2 1 0 Chromatin associated protein KTI12 ABC_tran PF00005.27 gi|15921181|ref|NP_376850.1| - 0.024 15.2 0.1 0.035 14.6 0.1 1.5 1 1 0 1 1 1 0 ABC transporter Viral_helicase1 PF01443.18 gi|15921181|ref|NP_376850.1| - 0.028 14.2 0.0 0.056 13.2 0.0 1.5 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_14 PF13173.6 gi|15921181|ref|NP_376850.1| - 0.037 14.1 0.0 0.093 12.8 0.0 1.9 1 1 0 1 1 1 0 AAA domain NB-ARC PF00931.22 gi|15921181|ref|NP_376850.1| - 0.038 13.2 0.0 0.073 12.2 0.0 1.5 1 0 0 1 1 1 0 NB-ARC domain KAP_NTPase PF07693.14 gi|15921181|ref|NP_376850.1| - 0.039 13.2 0.0 0.071 12.3 0.0 1.4 1 0 0 1 1 1 0 KAP family P-loop domain MobB PF03205.14 gi|15921181|ref|NP_376850.1| - 0.044 13.7 0.0 0.087 12.7 0.0 1.5 1 0 0 1 1 1 0 Molybdopterin guanine dinucleotide synthesis protein B AAA_29 PF13555.6 gi|15921181|ref|NP_376850.1| - 0.055 13.2 0.3 0.13 12.0 0.1 1.7 2 0 0 2 2 1 0 P-loop containing region of AAA domain G-alpha PF00503.20 gi|15921181|ref|NP_376850.1| - 0.058 12.5 0.0 0.12 11.5 0.0 1.5 1 0 0 1 1 1 0 G-protein alpha subunit AAA_30 PF13604.6 gi|15921181|ref|NP_376850.1| - 0.059 13.1 0.0 0.13 11.9 0.0 1.5 1 0 0 1 1 1 0 AAA domain SRPRB PF09439.10 gi|15921181|ref|NP_376850.1| - 0.059 12.8 0.1 5.9 6.3 0.0 2.1 2 0 0 2 2 2 0 Signal recognition particle receptor beta subunit CbiA PF01656.23 gi|15921181|ref|NP_376850.1| - 0.059 13.4 0.0 0.084 12.9 0.0 1.3 1 1 0 1 1 1 0 CobQ/CobB/MinD/ParA nucleotide binding domain ATPase_2 PF01637.18 gi|15921181|ref|NP_376850.1| - 0.062 13.2 0.0 0.11 12.3 0.0 1.6 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_19 PF13245.6 gi|15921181|ref|NP_376850.1| - 0.068 13.5 0.0 0.48 10.8 0.0 2.2 3 0 0 3 3 3 0 AAA domain Arf PF00025.21 gi|15921181|ref|NP_376850.1| - 0.099 12.1 0.0 0.35 10.3 0.0 1.8 2 0 0 2 2 2 0 ADP-ribosylation factor family Roc PF08477.13 gi|15921181|ref|NP_376850.1| - 0.12 12.7 0.0 0.46 10.7 0.0 1.9 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase AAA_7 PF12775.7 gi|15921181|ref|NP_376850.1| - 0.14 11.7 0.0 0.29 10.6 0.0 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region APS_kinase PF01583.20 gi|15921181|ref|NP_376850.1| - 0.15 12.0 0.0 0.27 11.1 0.0 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase AAA_5 PF07728.14 gi|15921181|ref|NP_376850.1| - 0.16 12.0 0.0 0.31 11.0 0.0 1.6 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) Zeta_toxin PF06414.12 gi|15921181|ref|NP_376850.1| - 0.17 11.1 0.0 0.28 10.4 0.0 1.3 1 0 0 1 1 1 0 Zeta toxin TrwB_AAD_bind PF10412.9 gi|15921181|ref|NP_376850.1| - 0.17 10.8 0.0 0.32 9.9 0.0 1.4 1 0 0 1 1 1 0 Type IV secretion-system coupling protein DNA-binding domain PhoH PF02562.16 gi|15921181|ref|NP_376850.1| - 0.19 11.2 0.0 0.4 10.1 0.0 1.5 2 0 0 2 2 2 0 PhoH-like protein AAA_33 PF13671.6 gi|15921181|ref|NP_376850.1| - 0.2 11.8 0.0 0.32 11.2 0.0 1.5 1 1 0 1 1 1 0 AAA domain Pribosyltran_N PF13793.6 gi|15921182|ref|NP_376851.1| - 2e-28 98.7 0.1 5.9e-26 90.7 0.0 2.5 2 1 0 2 2 2 2 N-terminal domain of ribose phosphate pyrophosphokinase Pribosyltran PF00156.27 gi|15921182|ref|NP_376851.1| - 4.7e-22 78.2 0.9 1.4e-21 76.7 0.4 1.9 2 0 0 2 2 2 1 Phosphoribosyl transferase domain Pribosyl_synth PF14572.6 gi|15921182|ref|NP_376851.1| - 2e-13 50.8 2.1 4.6e-13 49.6 1.5 1.8 1 1 1 2 2 2 1 Phosphoribosyl synthetase-associated domain UPRTase PF14681.6 gi|15921182|ref|NP_376851.1| - 1.4e-06 27.9 0.5 3e-05 23.6 0.2 2.3 2 1 0 2 2 2 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|15921182|ref|NP_376851.1| - 0.0015 18.0 0.0 0.0025 17.4 0.0 1.4 1 0 0 1 1 1 1 Phosphoribosyl transferase SRP54 PF00448.22 gi|15921182|ref|NP_376851.1| - 0.024 14.3 0.0 0.071 12.7 0.0 1.8 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain UPF0020 PF01170.18 gi|15921183|ref|NP_376852.1| - 4.2e-22 78.8 0.0 1.4e-21 77.1 0.0 1.7 1 1 0 1 1 1 1 Putative RNA methylase family UPF0020 N6_N4_Mtase PF01555.18 gi|15921183|ref|NP_376852.1| - 5e-09 36.2 0.5 1.1e-06 28.5 0.0 2.8 3 0 0 3 3 3 1 DNA methylase Methyltransf_25 PF13649.6 gi|15921183|ref|NP_376852.1| - 0.00026 21.6 0.0 0.00053 20.6 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|15921183|ref|NP_376852.1| - 0.00046 20.0 0.0 0.0018 18.1 0.0 1.9 2 1 1 3 3 3 1 Methyltransferase domain MethyltransfD12 PF02086.15 gi|15921183|ref|NP_376852.1| - 0.0023 17.7 0.2 0.0088 15.7 0.0 2.2 2 1 0 2 2 2 1 D12 class N6 adenine-specific DNA methyltransferase Cons_hypoth95 PF03602.15 gi|15921183|ref|NP_376852.1| - 0.0029 17.3 0.0 0.0053 16.4 0.0 1.4 1 0 0 1 1 1 1 Conserved hypothetical protein 95 MTS PF05175.14 gi|15921183|ref|NP_376852.1| - 0.0091 15.6 0.0 0.044 13.3 0.0 1.8 1 1 1 2 2 2 1 Methyltransferase small domain Methyltransf_15 PF09445.10 gi|15921183|ref|NP_376852.1| - 0.027 14.0 0.1 0.71 9.4 0.0 2.2 2 0 0 2 2 2 0 RNA cap guanine-N2 methyltransferase Methyltransf_11 PF08241.12 gi|15921183|ref|NP_376852.1| - 0.03 14.9 0.0 0.064 13.9 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain Lactamase_B_2 PF12706.7 gi|15921184|ref|NP_376853.1| - 1.6e-17 63.7 0.0 9e-10 38.4 0.0 2.1 2 0 0 2 2 2 2 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|15921184|ref|NP_376853.1| - 5.3e-08 33.1 0.0 1.9e-07 31.3 0.0 1.9 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_4 PF13691.6 gi|15921184|ref|NP_376853.1| - 0.00017 21.2 0.0 0.00034 20.2 0.0 1.5 1 0 0 1 1 1 1 tRNase Z endonuclease RNA_binding PF01877.17 gi|15921185|ref|NP_376854.1| - 2.2e-20 73.1 1.3 2.6e-20 72.9 1.3 1.1 1 0 0 1 1 1 1 RNA binding TssD PF17642.1 gi|15921185|ref|NP_376854.1| - 0.13 12.1 0.0 10 6.0 0.0 2.2 1 1 1 2 2 2 0 Hemolysin coregulated protein Hcp (TssD) AAA_17 PF13207.6 gi|15921186|ref|NP_376855.1| - 1e-12 48.6 0.4 1.7e-12 47.9 0.4 1.3 1 0 0 1 1 1 1 AAA domain AAA_18 PF13238.6 gi|15921186|ref|NP_376855.1| - 2.9e-12 47.2 0.2 4.4e-12 46.7 0.2 1.3 1 0 0 1 1 1 1 AAA domain AAA_33 PF13671.6 gi|15921186|ref|NP_376855.1| - 0.00051 20.2 0.0 0.0016 18.6 0.0 1.7 1 1 0 1 1 1 1 AAA domain ADK PF00406.22 gi|15921186|ref|NP_376855.1| - 0.0006 19.9 0.2 0.00077 19.6 0.2 1.4 1 1 0 1 1 1 1 Adenylate kinase Amidinotransf PF02274.17 gi|15921186|ref|NP_376855.1| - 0.042 12.9 0.0 0.042 12.9 0.0 1.2 1 0 0 1 1 1 0 Amidinotransferase CoaE PF01121.20 gi|15921186|ref|NP_376855.1| - 0.092 12.4 0.0 11 5.7 0.0 2.2 2 0 0 2 2 2 0 Dephospho-CoA kinase LigT_PEase PF02834.16 gi|15921187|ref|NP_376856.1| - 9.6e-31 105.8 0.0 1.8e-15 56.9 0.0 2.0 2 0 0 2 2 2 2 LigT like Phosphoesterase 2_5_RNA_ligase2 PF13563.6 gi|15921187|ref|NP_376856.1| - 2.1e-13 50.4 0.0 2.5e-13 50.2 0.0 1.1 1 0 0 1 1 1 1 2'-5' RNA ligase superfamily AKAP7_NLS PF10469.9 gi|15921187|ref|NP_376856.1| - 1.6e-10 41.2 0.0 2.7e-10 40.5 0.0 1.3 1 1 0 1 1 1 1 AKAP7 2'5' RNA ligase-like domain tRNA_NucTransf2 PF09249.11 gi|15921188|ref|NP_376857.1| - 8.8e-44 148.4 0.0 1.6e-43 147.5 0.0 1.4 1 0 0 1 1 1 1 tRNA nucleotidyltransferase, second domain NTP_transf_2 PF01909.23 gi|15921188|ref|NP_376857.1| - 6.6e-15 55.2 0.2 1.8e-14 53.8 0.2 1.7 1 0 0 1 1 1 1 Nucleotidyltransferase domain SMODS PF18144.1 gi|15921188|ref|NP_376857.1| - 1.4e-07 31.8 0.0 3.7e-07 30.4 0.0 1.6 1 0 0 1 1 1 1 Second Messenger Oligonucleotide or Dinucleotide Synthetase domain DNA_pol_B_palm PF14792.6 gi|15921188|ref|NP_376857.1| - 0.031 14.5 0.0 0.073 13.3 0.0 1.6 1 0 0 1 1 1 0 DNA polymerase beta palm RIO1 PF01163.22 gi|15921189|ref|NP_376858.1| - 0.008 15.8 0.2 0.016 14.9 0.2 1.5 1 1 0 1 1 1 1 RIO1 family APH PF01636.23 gi|15921189|ref|NP_376858.1| - 0.1 12.5 0.0 4.9 7.0 0.0 2.1 2 0 0 2 2 2 0 Phosphotransferase enzyme family Ribosomal_L30 PF00327.20 gi|15921190|ref|NP_376859.1| - 0.11 12.4 0.2 0.15 12.0 0.2 1.2 1 0 0 1 1 1 0 Ribosomal protein L30p/L7e SSV1_ORF_D-335 PF07935.11 gi|15921191|ref|NP_376860.1| - 3.9e-25 87.9 0.6 5e-25 87.6 0.6 1.1 1 0 0 1 1 1 1 ORF D-335-like protein pRN1_helical PF13010.6 gi|15921192|ref|NP_376861.1| - 2.7e-81 270.3 8.0 2.7e-81 270.3 8.0 3.2 4 0 0 4 4 4 1 Primase helical domain D5_N PF08706.11 gi|15921192|ref|NP_376861.1| - 2.1e-15 57.3 2.1 2.1e-15 57.3 2.1 4.0 3 1 1 4 4 4 1 D5 N terminal like Prim-Pol PF09250.11 gi|15921192|ref|NP_376861.1| - 2.7e-13 50.6 0.0 4.9e-13 49.7 0.0 1.4 1 0 0 1 1 1 1 Bifunctional DNA primase/polymerase, N-terminal RFX_DNA_binding PF02257.15 gi|15921192|ref|NP_376861.1| - 0.0004 21.0 0.1 0.0011 19.6 0.1 1.7 1 0 0 1 1 1 1 RFX DNA-binding domain PriX PF18689.1 gi|15921192|ref|NP_376861.1| - 0.018 15.3 1.5 1.1 9.7 0.1 3.6 2 0 0 2 2 2 0 Primase X HI0933_like PF03486.14 gi|15921192|ref|NP_376861.1| - 0.031 13.0 0.0 0.061 12.0 0.0 1.4 1 0 0 1 1 1 0 HI0933-like protein FliG_N PF14842.6 gi|15921192|ref|NP_376861.1| - 0.18 12.3 2.0 0.56 10.8 0.1 2.7 3 0 0 3 3 3 0 FliG N-terminal domain SapB_1 PF05184.15 gi|15921192|ref|NP_376861.1| - 7.5 6.7 9.9 8 6.6 0.3 3.9 3 1 0 3 3 3 0 Saposin-like type B, region 1 pEK499_p136 PF18736.1 gi|15921193|ref|NP_376862.1| - 0.03 13.9 0.1 0.037 13.7 0.1 1.0 1 0 0 1 1 1 0 HEPN pEK499 p136 zf-CCHH PF10283.9 gi|15921194|ref|NP_376863.1| - 0.011 15.7 0.0 0.024 14.6 0.0 1.6 1 0 0 1 1 1 0 PBZ domain DUF2774 PF11242.8 gi|15921195|ref|NP_376864.1| - 0.0056 16.8 0.1 0.0072 16.5 0.1 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2774) IF2_N PF04760.15 gi|15921195|ref|NP_376864.1| - 0.0069 16.2 3.4 0.15 11.9 3.4 2.1 1 1 0 1 1 1 1 Translation initiation factor IF-2, N-terminal region HTH_10 PF04967.12 gi|15921195|ref|NP_376864.1| - 0.016 15.0 0.4 4.4 7.2 0.0 2.3 1 1 1 2 2 2 0 HTH DNA binding domain HTH_6 PF01418.17 gi|15921195|ref|NP_376864.1| - 0.023 14.7 0.1 0.11 12.5 0.1 1.9 1 1 0 1 1 1 0 Helix-turn-helix domain, rpiR family Sigma70_r4 PF04545.16 gi|15921195|ref|NP_376864.1| - 0.024 14.1 0.0 0.05 13.1 0.0 1.5 1 1 1 2 2 2 0 Sigma-70, region 4 Sec63 PF02889.16 gi|15921195|ref|NP_376864.1| - 0.028 13.6 0.1 0.031 13.5 0.1 1.1 1 0 0 1 1 1 0 Sec63 Brl domain Phage_terminase PF10668.9 gi|15921195|ref|NP_376864.1| - 0.058 13.4 0.7 1.1 9.4 0.1 2.1 1 1 1 2 2 2 0 Phage terminase small subunit Fe_dep_repress PF01325.19 gi|15921195|ref|NP_376864.1| - 0.059 13.6 0.1 0.072 13.3 0.1 1.3 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain RHH_1 PF01402.21 gi|15921195|ref|NP_376864.1| - 0.076 13.0 2.2 0.12 12.4 2.2 1.4 1 1 0 1 1 1 0 Ribbon-helix-helix protein, copG family HTH_7 PF02796.15 gi|15921195|ref|NP_376864.1| - 0.086 12.9 0.1 9.4 6.4 0.0 2.1 1 1 1 2 2 2 0 Helix-turn-helix domain of resolvase E3_binding PF02817.17 gi|15921195|ref|NP_376864.1| - 0.098 13.0 0.4 0.44 10.9 0.0 2.1 2 0 0 2 2 2 0 e3 binding domain zf-C2H2 PF00096.26 gi|15921199|ref|NP_376868.1| - 6.7e-09 35.7 2.5 0.00014 22.1 0.2 2.3 2 0 0 2 2 2 2 Zinc finger, C2H2 type zf-C2H2_4 PF13894.6 gi|15921199|ref|NP_376868.1| - 5e-08 33.1 2.4 0.0011 19.6 0.2 2.4 2 0 0 2 2 2 2 C2H2-type zinc finger zf-C2H2_2 PF12756.7 gi|15921199|ref|NP_376868.1| - 3.6e-07 30.4 0.2 0.0024 18.2 0.0 2.3 1 1 1 2 2 2 2 C2H2 type zinc-finger (2 copies) zf-C2H2_6 PF13912.6 gi|15921199|ref|NP_376868.1| - 2.7e-05 24.0 0.5 0.096 12.7 0.1 2.3 2 0 0 2 2 2 2 C2H2-type zinc finger zf-Di19 PF05605.12 gi|15921199|ref|NP_376868.1| - 3.4e-05 24.0 0.9 0.13 12.5 0.2 2.3 1 1 1 2 2 2 2 Drought induced 19 protein (Di19), zinc-binding zf-BED PF02892.15 gi|15921199|ref|NP_376868.1| - 0.00053 20.0 1.4 0.00053 20.0 1.4 2.3 1 1 1 2 2 2 1 BED zinc finger DUF629 PF04780.12 gi|15921199|ref|NP_376868.1| - 0.0006 18.5 1.5 0.021 13.4 0.4 2.1 1 1 1 2 2 2 2 Protein of unknown function (DUF629) Prok-RING_1 PF14446.6 gi|15921199|ref|NP_376868.1| - 0.0021 18.0 1.5 0.14 12.1 0.1 2.2 2 0 0 2 2 2 1 Prokaryotic RING finger family 1 zf-C2H2_9 PF16293.5 gi|15921199|ref|NP_376868.1| - 0.0032 17.3 0.7 0.27 11.1 0.1 2.5 2 1 1 3 3 3 1 C2H2 type zinc-finger (1 copy) zf-MYST PF17772.1 gi|15921199|ref|NP_376868.1| - 0.0045 16.6 1.4 0.14 11.8 0.1 2.4 1 1 1 2 2 2 1 MYST family zinc finger domain FOXP-CC PF16159.5 gi|15921199|ref|NP_376868.1| - 0.0062 17.1 0.8 1.3 9.7 0.1 2.3 1 1 1 2 2 2 1 FOXP coiled-coil domain HNH_5 PF14279.6 gi|15921199|ref|NP_376868.1| - 0.026 14.4 1.1 0.029 14.2 0.2 1.6 2 0 0 2 2 2 0 HNH endonuclease DUF2256 PF10013.9 gi|15921199|ref|NP_376868.1| - 0.046 13.8 2.6 0.98 9.6 0.1 2.2 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2256) Vps36-NZF-N PF16988.5 gi|15921199|ref|NP_376868.1| - 0.11 11.9 0.8 0.2 11.1 0.8 1.4 1 1 0 1 1 1 0 Vacuolar protein sorting 36 NZF-N zinc-finger domain HNH PF01844.23 gi|15921199|ref|NP_376868.1| - 0.17 12.0 3.5 0.3 11.3 0.8 2.1 2 0 0 2 2 2 0 HNH endonuclease Zn_ribbon_SprT PF17283.2 gi|15921199|ref|NP_376868.1| - 1.6 8.7 9.1 28 4.7 9.1 2.2 1 1 0 1 1 1 0 SprT-like zinc ribbon domain Phage_integr_3 PF16795.5 gi|15921200|ref|NP_376869.1| - 3e-27 95.5 0.1 5.1e-27 94.7 0.1 1.4 1 0 0 1 1 1 1 Archaeal phage integrase PX PF00787.24 gi|15921200|ref|NP_376869.1| - 0.089 12.8 0.2 0.22 11.5 0.0 1.8 2 0 0 2 2 2 0 PX domain PALP PF00291.25 gi|15921201|ref|NP_376870.1| - 9.2e-60 202.5 0.0 1.1e-59 202.3 0.0 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme DFP PF04127.15 gi|15921201|ref|NP_376870.1| - 0.031 14.1 0.2 0.056 13.3 0.2 1.3 1 0 0 1 1 1 0 DNA / pantothenate metabolism flavoprotein CgtA PF06306.11 gi|15921201|ref|NP_376870.1| - 0.15 11.5 0.0 12 5.3 0.0 2.1 2 0 0 2 2 2 0 Beta-1,4-N-acetylgalactosaminyltransferase (CgtA) zf-FPG_IleRS PF06827.14 gi|15921201|ref|NP_376870.1| - 0.66 9.9 3.7 10 6.1 0.4 2.5 2 0 0 2 2 2 0 Zinc finger found in FPG and IleRS CoA_binding PF02629.19 gi|15921203|ref|NP_376872.1| - 1.7e-21 76.7 0.6 1.7e-21 76.7 0.6 2.7 2 1 0 2 2 2 1 CoA binding domain Ligase_CoA PF00549.19 gi|15921203|ref|NP_376872.1| - 1.1e-14 54.5 1.6 1.8e-14 53.8 1.6 1.3 1 0 0 1 1 1 1 CoA-ligase CoA_binding_2 PF13380.6 gi|15921203|ref|NP_376872.1| - 1.7e-10 41.4 0.1 5.7e-10 39.7 0.0 1.8 2 0 0 2 2 2 1 CoA binding domain Succ_CoA_lig PF13607.6 gi|15921203|ref|NP_376872.1| - 2.5e-09 37.0 0.1 3.8e-09 36.4 0.1 1.3 1 0 0 1 1 1 1 Succinyl-CoA ligase like flavodoxin domain Radical_SAM PF04055.21 gi|15921203|ref|NP_376872.1| - 0.012 16.0 0.7 0.046 14.1 0.1 2.0 2 1 0 2 2 2 0 Radical SAM superfamily GFO_IDH_MocA PF01408.22 gi|15921203|ref|NP_376872.1| - 0.044 14.6 0.1 0.12 13.2 0.0 1.7 2 0 0 2 2 2 0 Oxidoreductase family, NAD-binding Rossmann fold HCV_NS5a_C PF12941.7 gi|15921203|ref|NP_376872.1| - 0.12 12.2 0.0 0.18 11.6 0.0 1.2 1 0 0 1 1 1 0 HCV NS5a protein C-terminal region ATP-grasp_2 PF08442.10 gi|15921204|ref|NP_376873.1| - 1.6e-18 67.0 1.8 2.3e-18 66.5 0.3 1.9 2 1 1 3 3 3 1 ATP-grasp domain Ligase_CoA PF00549.19 gi|15921204|ref|NP_376873.1| - 6.9e-15 55.2 0.3 1e-14 54.6 0.3 1.2 1 0 0 1 1 1 1 CoA-ligase HhH-GPD PF00730.25 gi|15921205|ref|NP_376874.1| - 8.2e-14 52.0 0.3 1.5e-13 51.1 0.1 1.6 2 0 0 2 2 1 1 HhH-GPD superfamily base excision DNA repair protein DUF4332 PF14229.6 gi|15921205|ref|NP_376874.1| - 0.0017 18.6 0.3 0.016 15.4 0.5 2.4 2 0 0 2 2 2 1 Domain of unknown function (DUF4332) HHH_2 PF12826.7 gi|15921205|ref|NP_376874.1| - 0.003 17.6 0.4 0.2 11.7 0.0 3.3 3 0 0 3 3 3 1 Helix-hairpin-helix motif HHH_5 PF14520.6 gi|15921205|ref|NP_376874.1| - 0.0036 17.9 6.7 0.13 12.9 0.2 3.4 2 1 1 3 3 3 2 Helix-hairpin-helix domain PYRIN PF02758.16 gi|15921205|ref|NP_376874.1| - 0.004 17.3 0.3 0.013 15.6 0.1 2.0 1 1 1 2 2 2 1 PAAD/DAPIN/Pyrin domain RAP PF08373.10 gi|15921205|ref|NP_376874.1| - 0.014 15.5 0.2 0.05 13.7 0.2 2.0 1 0 0 1 1 1 0 RAP domain HHH PF00633.23 gi|15921205|ref|NP_376874.1| - 0.018 14.9 2.0 0.26 11.2 0.1 3.2 3 0 0 3 3 3 0 Helix-hairpin-helix motif STPPase_N PF16891.5 gi|15921205|ref|NP_376874.1| - 0.018 15.5 4.3 0.087 13.3 0.9 2.8 2 1 1 3 3 3 0 Serine-threonine protein phosphatase N-terminal domain DUF4393 PF14337.6 gi|15921205|ref|NP_376874.1| - 0.052 13.4 1.7 0.11 12.3 0.7 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4393) EndIII_4Fe-2S PF10576.9 gi|15921205|ref|NP_376874.1| - 0.062 13.7 1.5 0.093 13.1 1.5 1.3 1 0 0 1 1 1 0 Iron-sulfur binding domain of endonuclease III PPS_PS PF02006.16 gi|15921205|ref|NP_376874.1| - 0.35 10.4 3.1 0.39 10.3 1.0 2.1 1 1 0 2 2 2 0 Phosphopantothenate/pantothenate synthetase Glyco_tran_28_C PF04101.16 gi|15921206|ref|NP_376875.1| - 9.8e-10 38.7 0.0 2e-08 34.4 0.0 2.6 3 0 0 3 3 3 1 Glycosyltransferase family 28 C-terminal domain Glyco_trans_1_3 PF13528.6 gi|15921206|ref|NP_376875.1| - 0.0087 15.3 0.0 0.015 14.6 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 1 tRNA-synt_2b PF00587.25 gi|15921207|ref|NP_376876.1| - 3.8e-41 141.0 0.0 1.3e-40 139.3 0.0 1.9 1 1 1 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 gi|15921207|ref|NP_376876.1| - 1e-20 73.7 2.0 1.9e-20 72.8 1.2 1.9 2 0 0 2 2 2 1 Anticodon binding domain HGTP_anticodon2 PF12745.7 gi|15921207|ref|NP_376876.1| - 0.00049 19.7 0.6 0.00073 19.1 0.6 1.3 1 0 0 1 1 1 1 Anticodon binding domain of tRNAs eIF-5a PF01287.20 gi|15921207|ref|NP_376876.1| - 0.021 14.9 1.8 0.15 12.2 0.2 2.6 2 0 0 2 2 2 0 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold DNA_binding_1 PF01035.20 gi|15921208|ref|NP_376877.1| - 9.9e-24 83.3 0.0 1.2e-23 83.0 0.0 1.1 1 0 0 1 1 1 1 6-O-methylguanine DNA methyltransferase, DNA binding domain NTP_transferase PF00483.23 gi|15921209|ref|NP_376878.1| - 2.2e-34 119.1 0.0 3.1e-34 118.7 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|15921209|ref|NP_376878.1| - 1.2e-08 35.4 0.0 1.6e-08 35.1 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain IspD PF01128.19 gi|15921209|ref|NP_376878.1| - 0.00027 20.7 0.0 0.00039 20.2 0.0 1.2 1 0 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DUF4224 PF13986.6 gi|15921209|ref|NP_376878.1| - 0.027 14.4 0.0 0.11 12.5 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4224) DUF1035 PF06281.12 gi|15921210|ref|NP_376879.1| - 3.8e-16 58.8 4.8 2.6e-15 56.2 4.8 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF1035) TMEM208_SND2 PF05620.11 gi|15921210|ref|NP_376879.1| - 0.13 12.0 0.1 0.14 11.9 0.1 1.1 1 0 0 1 1 1 0 SRP-independent targeting protein 2/TMEM208 HigB_toxin PF09907.9 gi|15921211|ref|NP_376880.1| - 0.072 13.3 1.0 0.18 12.1 0.1 2.2 2 0 0 2 2 2 0 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system TMEM154 PF15102.6 gi|15921211|ref|NP_376880.1| - 0.48 10.3 7.5 0.86 9.5 7.5 1.4 1 0 0 1 1 1 0 TMEM154 protein family PaREP1 PF05942.11 gi|15921212|ref|NP_376881.1| - 2.8e-15 56.3 0.9 2.8e-15 56.3 0.9 1.4 2 0 0 2 2 2 1 Archaeal PaREP1/PaREP8 family DUF357 PF04010.13 gi|15921212|ref|NP_376881.1| - 0.0044 17.1 0.2 0.011 15.7 0.1 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF357) HEPN PF05168.14 gi|15921212|ref|NP_376881.1| - 0.036 14.2 0.4 0.036 14.2 0.4 1.5 2 0 0 2 2 2 0 HEPN domain Glyco_transf_20 PF00982.21 gi|15921212|ref|NP_376881.1| - 0.047 12.4 0.9 0.049 12.3 0.9 1.0 1 0 0 1 1 1 0 Glycosyltransferase family 20 DUF4261 PF14080.6 gi|15921212|ref|NP_376881.1| - 0.09 12.9 0.0 0.11 12.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4261) Pyr_redox_2 PF07992.14 gi|15921213|ref|NP_376882.1| - 5.9e-21 75.0 0.0 4.2e-20 72.2 0.0 1.9 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|15921213|ref|NP_376882.1| - 5.7e-05 23.6 1.8 0.29 11.7 0.3 2.5 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|15921213|ref|NP_376882.1| - 9.4e-05 22.1 0.1 0.00073 19.2 0.1 2.2 2 0 0 2 2 2 1 FAD dependent oxidoreductase Trp_halogenase PF04820.14 gi|15921213|ref|NP_376882.1| - 0.00055 18.9 0.0 0.00093 18.2 0.0 1.4 1 0 0 1 1 1 1 Tryptophan halogenase NAD_binding_9 PF13454.6 gi|15921213|ref|NP_376882.1| - 0.0054 16.7 0.0 0.1 12.6 0.1 2.4 2 0 0 2 2 2 1 FAD-NAD(P)-binding NAD_binding_8 PF13450.6 gi|15921213|ref|NP_376882.1| - 0.012 15.8 0.1 0.029 14.6 0.1 1.6 1 0 0 1 1 1 0 NAD(P)-binding Rossmann-like domain FAD_binding_2 PF00890.24 gi|15921213|ref|NP_376882.1| - 0.013 14.6 0.1 0.02 14.0 0.1 1.3 1 0 0 1 1 1 0 FAD binding domain Urocanase PF01175.18 gi|15921213|ref|NP_376882.1| - 0.3 10.7 1.2 0.35 10.5 0.3 1.6 2 0 0 2 2 2 0 Urocanase Rossmann-like domain DUF4364 PF14277.6 gi|15921214|ref|NP_376883.1| - 0.0029 17.3 0.6 0.0029 17.3 0.6 1.8 2 1 0 2 2 2 1 Domain of unknown function (DUF4364) Robl_LC7 PF03259.17 gi|15921214|ref|NP_376883.1| - 0.0078 16.0 0.0 0.013 15.3 0.0 1.3 1 0 0 1 1 1 1 Roadblock/LC7 domain Ribosomal_L12_N PF16320.5 gi|15921214|ref|NP_376883.1| - 0.21 11.3 0.2 0.49 10.1 0.2 1.6 1 0 0 1 1 1 0 Ribosomal protein L7/L12 dimerisation domain Glyco_hydro_15 PF00723.21 gi|15921215|ref|NP_376884.1| - 5.6e-49 167.1 0.0 1.9e-47 162.1 0.2 2.0 1 1 1 2 2 2 2 Glycosyl hydrolases family 15 Glyco_hydro_125 PF06824.11 gi|15921215|ref|NP_376884.1| - 7.8e-06 25.0 1.2 0.0028 16.6 0.0 2.9 1 1 1 2 2 2 2 Metal-independent alpha-mannosidase (GH125) TPR_19 PF14559.6 gi|15921215|ref|NP_376884.1| - 0.011 16.3 0.1 0.61 10.6 0.0 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat Bac_rhamnosid6H PF17389.2 gi|15921215|ref|NP_376884.1| - 0.16 11.2 5.3 0.48 9.6 5.3 1.7 1 1 0 1 1 1 0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain Glycos_transf_1 PF00534.20 gi|15921216|ref|NP_376885.1| - 6.9e-36 123.4 0.2 1.5e-35 122.3 0.0 1.5 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|15921216|ref|NP_376885.1| - 7.9e-25 87.8 0.0 1.3e-24 87.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|15921216|ref|NP_376885.1| - 3.3e-05 24.2 0.0 0.00016 22.0 0.0 2.1 2 0 0 2 2 2 1 Glycosyl transferases group 1 DUF4930 PF16284.5 gi|15921216|ref|NP_376885.1| - 0.0073 16.3 0.1 0.017 15.1 0.1 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF4930) Glyco_transf_20 PF00982.21 gi|15921216|ref|NP_376885.1| - 0.067 11.9 0.9 1 8.0 0.1 2.2 2 1 0 2 2 2 0 Glycosyltransferase family 20 DUF1506 PF07405.11 gi|15921216|ref|NP_376885.1| - 0.17 12.1 1.7 6.5 7.0 0.1 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF1506) PNP_UDP_1 PF01048.20 gi|15921217|ref|NP_376886.1| - 7.4e-37 126.8 0.0 8.4e-37 126.7 0.0 1.0 1 0 0 1 1 1 1 Phosphorylase superfamily HD PF01966.22 gi|15921218|ref|NP_376887.1| - 3e-10 40.4 1.9 3.6e-10 40.1 0.2 2.1 2 1 1 3 3 3 1 HD domain HDOD PF08668.12 gi|15921218|ref|NP_376887.1| - 0.062 12.8 0.0 0.12 11.8 0.0 1.5 1 0 0 1 1 1 0 HDOD domain Nudix_N PF12535.8 gi|15921218|ref|NP_376887.1| - 0.11 12.1 0.0 0.86 9.3 0.0 2.4 2 0 0 2 2 2 0 Hydrolase of X-linked nucleoside diphosphate N terminal MDD_C PF18376.1 gi|15921219|ref|NP_376888.1| - 1.6e-34 119.3 0.1 9.9e-33 113.5 0.0 2.2 1 1 1 2 2 2 2 Mevalonate 5-diphosphate decarboxylase C-terminal domain GHMP_kinases_N PF00288.26 gi|15921219|ref|NP_376888.1| - 4.4e-09 36.4 1.5 7.1e-09 35.8 1.5 1.3 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_N PF00288.26 gi|15921220|ref|NP_376889.1| - 2.4e-14 53.3 0.0 6.1e-14 52.0 0.0 1.7 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|15921220|ref|NP_376889.1| - 9.8e-05 22.6 0.1 0.00022 21.5 0.1 1.6 1 0 0 1 1 1 1 GHMP kinases C terminal DUF4749 PF15936.5 gi|15921221|ref|NP_376890.1| - 0.11 13.6 0.7 0.19 12.8 0.7 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4749) tRNA-synt_2 PF00152.20 gi|15921221|ref|NP_376890.1| - 0.47 9.5 4.6 0.9 8.5 4.6 1.4 1 1 0 1 1 1 0 tRNA synthetases class II (D, K and N) HTH_45 PF14947.6 gi|15921222|ref|NP_376891.1| - 3.5e-28 97.4 0.9 4.4e-28 97.1 0.9 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_27 PF13463.6 gi|15921222|ref|NP_376891.1| - 0.0005 20.5 0.0 0.00085 19.8 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain Ribosomal_S19e PF01090.19 gi|15921222|ref|NP_376891.1| - 0.00089 19.0 0.0 0.0013 18.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal protein S19e DUF4364 PF14277.6 gi|15921222|ref|NP_376891.1| - 0.0022 17.7 0.1 0.0024 17.6 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4364) Mrr_N PF14338.6 gi|15921222|ref|NP_376891.1| - 0.0037 17.4 0.0 0.014 15.5 0.0 1.9 1 1 0 1 1 1 1 Mrr N-terminal domain FtsK_gamma PF09397.10 gi|15921222|ref|NP_376891.1| - 0.008 16.0 0.0 0.013 15.3 0.0 1.4 1 0 0 1 1 1 1 Ftsk gamma domain Rrf2 PF02082.20 gi|15921222|ref|NP_376891.1| - 0.024 15.0 0.0 0.033 14.5 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator Topoisom_bac PF01131.20 gi|15921222|ref|NP_376891.1| - 0.032 13.2 0.0 0.042 12.9 0.0 1.2 1 0 0 1 1 1 0 DNA topoisomerase HTH_24 PF13412.6 gi|15921222|ref|NP_376891.1| - 0.039 13.5 0.0 0.089 12.4 0.0 1.7 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding RPAP3_C PF13877.6 gi|15921222|ref|NP_376891.1| - 0.06 13.9 0.0 0.1 13.2 0.0 1.6 1 1 0 1 1 1 0 Potential Monad-binding region of RPAP3 Ribosomal_S8 PF00410.19 gi|15921222|ref|NP_376891.1| - 0.1 12.5 0.1 0.11 12.4 0.1 1.2 1 0 0 1 1 1 0 Ribosomal protein S8 TrmB PF01978.19 gi|15921223|ref|NP_376892.1| - 1.3e-11 44.2 0.1 1.8e-11 43.8 0.1 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.12 gi|15921223|ref|NP_376892.1| - 6.3e-08 32.4 0.1 1.2e-07 31.5 0.1 1.4 1 0 0 1 1 1 1 HTH domain MarR PF01047.22 gi|15921223|ref|NP_376892.1| - 2e-07 30.8 0.2 3.1e-07 30.2 0.2 1.3 1 0 0 1 1 1 1 MarR family Fe_dep_repress PF01325.19 gi|15921223|ref|NP_376892.1| - 3.4e-07 30.3 0.3 1.2e-06 28.6 0.3 1.8 1 1 1 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain TFIIE_alpha PF02002.17 gi|15921223|ref|NP_376892.1| - 9.6e-07 28.6 0.8 1.1e-06 28.5 0.8 1.2 1 0 0 1 1 1 1 TFIIE alpha subunit MarR_2 PF12802.7 gi|15921223|ref|NP_376892.1| - 1.4e-06 28.1 0.0 1.7e-06 27.8 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.20 gi|15921223|ref|NP_376892.1| - 8.4e-06 25.6 0.1 1.4e-05 24.9 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_27 PF13463.6 gi|15921223|ref|NP_376892.1| - 8.7e-06 26.1 0.0 1.3e-05 25.5 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain GntR PF00392.21 gi|15921223|ref|NP_376892.1| - 4.6e-05 23.0 0.1 0.0003 20.4 0.0 1.9 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family HTH_24 PF13412.6 gi|15921223|ref|NP_376892.1| - 0.00011 21.7 0.0 0.00017 21.1 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding SMC_ScpB PF04079.16 gi|15921223|ref|NP_376892.1| - 0.00041 20.0 0.0 0.0005 19.7 0.0 1.2 1 0 0 1 1 1 1 Segregation and condensation complex subunit ScpB HTH_Crp_2 PF13545.6 gi|15921223|ref|NP_376892.1| - 0.00047 20.1 0.0 0.00064 19.6 0.0 1.2 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain Phage_rep_O PF04492.13 gi|15921223|ref|NP_376892.1| - 0.0012 19.3 0.2 0.002 18.7 0.1 1.4 1 1 0 1 1 1 1 Bacteriophage replication protein O Rrf2 PF02082.20 gi|15921223|ref|NP_376892.1| - 0.0013 19.1 0.0 0.002 18.4 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator RuvB_C PF05491.13 gi|15921223|ref|NP_376892.1| - 0.0021 17.9 0.2 0.0035 17.2 0.2 1.3 1 0 0 1 1 1 1 RuvB C-terminal winged helix domain HTH_DeoR PF08220.12 gi|15921223|ref|NP_376892.1| - 0.0022 17.7 0.1 0.0046 16.7 0.0 1.5 2 0 0 2 2 1 1 DeoR-like helix-turn-helix domain RP-C PF03428.13 gi|15921223|ref|NP_376892.1| - 0.0057 16.3 0.0 0.0071 16.0 0.0 1.4 1 1 0 1 1 1 1 Replication protein C N-terminal domain HTH_20 PF12840.7 gi|15921223|ref|NP_376892.1| - 0.0074 16.3 0.0 0.01 15.8 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain DUF4423 PF14394.6 gi|15921223|ref|NP_376892.1| - 0.01 15.6 0.2 0.016 15.0 0.2 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4423) PadR PF03551.14 gi|15921223|ref|NP_376892.1| - 0.016 15.2 0.0 0.025 14.5 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family HTH_36 PF13730.6 gi|15921223|ref|NP_376892.1| - 0.02 14.8 0.0 0.031 14.2 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain DDRGK PF09756.9 gi|15921223|ref|NP_376892.1| - 0.027 14.1 0.1 0.043 13.4 0.1 1.3 1 0 0 1 1 1 0 DDRGK domain HTH_10 PF04967.12 gi|15921223|ref|NP_376892.1| - 0.039 13.8 0.0 0.074 12.9 0.0 1.4 1 0 0 1 1 1 0 HTH DNA binding domain Mnd1 PF03962.15 gi|15921223|ref|NP_376892.1| - 0.042 14.1 1.5 0.12 12.7 0.7 2.3 1 1 1 2 2 2 0 Mnd1 HTH domain FeoC PF09012.10 gi|15921223|ref|NP_376892.1| - 0.046 13.8 0.1 0.074 13.1 0.1 1.3 1 0 0 1 1 1 0 FeoC like transcriptional regulator Tfb2 PF03849.14 gi|15921223|ref|NP_376892.1| - 0.06 12.3 0.2 0.059 12.3 0.2 1.0 1 0 0 1 1 1 0 Transcription factor Tfb2 TBPIP PF07106.13 gi|15921223|ref|NP_376892.1| - 0.063 13.2 0.6 0.12 12.3 0.4 1.6 1 1 0 1 1 1 0 TBPIP/Hop2 winged helix domain DUF123 PF01986.16 gi|15921224|ref|NP_376893.1| - 4.7e-17 62.3 0.0 6.2e-17 61.9 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF123 GIY-YIG PF01541.24 gi|15921224|ref|NP_376893.1| - 0.015 15.6 0.1 0.019 15.3 0.1 1.4 1 0 0 1 1 1 0 GIY-YIG catalytic domain TPR_2 PF07719.17 gi|15921226|ref|NP_376895.1| - 6.9e-26 88.2 18.1 1.1e-06 28.2 0.1 8.5 6 2 2 8 8 8 5 Tetratricopeptide repeat TPR_1 PF00515.28 gi|15921226|ref|NP_376895.1| - 6.6e-23 79.5 26.2 2.8e-08 33.2 0.1 8.0 8 1 0 8 8 7 5 Tetratricopeptide repeat TPR_8 PF13181.6 gi|15921226|ref|NP_376895.1| - 3.2e-20 70.6 23.3 3.4e-07 30.0 0.2 6.7 6 2 1 7 7 6 4 Tetratricopeptide repeat TPR_16 PF13432.6 gi|15921226|ref|NP_376895.1| - 4.9e-19 68.7 0.1 4.6e-06 27.2 0.0 4.1 3 1 2 5 5 5 3 Tetratricopeptide repeat TPR_11 PF13414.6 gi|15921226|ref|NP_376895.1| - 2.4e-18 65.5 19.4 9.2e-09 34.8 0.1 6.3 5 2 2 7 7 7 4 TPR repeat TPR_17 PF13431.6 gi|15921226|ref|NP_376895.1| - 2e-17 62.2 7.6 0.0024 18.1 0.0 6.3 6 0 0 6 6 6 4 Tetratricopeptide repeat TPR_19 PF14559.6 gi|15921226|ref|NP_376895.1| - 5e-17 62.2 7.9 9.6e-07 29.2 0.0 4.9 3 1 2 5 5 5 3 Tetratricopeptide repeat TPR_14 PF13428.6 gi|15921226|ref|NP_376895.1| - 1.1e-14 53.9 0.3 0.00049 20.7 0.0 6.3 3 2 4 7 7 7 2 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|15921226|ref|NP_376895.1| - 1.5e-12 47.5 6.4 2.1e-05 24.7 0.1 3.3 2 2 1 3 3 3 3 Anaphase-promoting complex, cyclosome, subunit 3 TPR_7 PF13176.6 gi|15921226|ref|NP_376895.1| - 2.3e-09 36.6 0.7 0.11 12.5 0.0 5.8 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_12 PF13424.6 gi|15921226|ref|NP_376895.1| - 2.1e-08 34.3 5.8 0.31 11.3 0.1 6.2 3 2 3 6 6 6 2 Tetratricopeptide repeat TPR_6 PF13174.6 gi|15921226|ref|NP_376895.1| - 3.1e-08 33.7 9.8 4.7 8.1 0.0 7.4 7 1 1 8 8 8 2 Tetratricopeptide repeat TPR_9 PF13371.6 gi|15921226|ref|NP_376895.1| - 1.6e-07 31.4 0.0 0.036 14.2 0.0 4.3 3 2 1 5 5 5 1 Tetratricopeptide repeat FAT PF02259.23 gi|15921226|ref|NP_376895.1| - 1.1e-06 28.1 0.2 0.0013 18.0 0.0 2.1 2 0 0 2 2 2 2 FAT domain NARP1 PF12569.8 gi|15921226|ref|NP_376895.1| - 5.2e-06 25.6 3.4 0.00073 18.6 0.1 2.9 2 1 1 3 3 3 3 NMDA receptor-regulated protein 1 TPR_20 PF14561.6 gi|15921226|ref|NP_376895.1| - 3.8e-05 23.9 0.8 13 6.2 0.0 4.8 2 2 3 5 5 5 0 Tetratricopeptide repeat Coatomer_E PF04733.14 gi|15921226|ref|NP_376895.1| - 0.00077 19.0 2.7 0.0099 15.3 0.2 2.4 2 1 1 3 3 3 1 Coatomer epsilon subunit TPR_10 PF13374.6 gi|15921226|ref|NP_376895.1| - 0.0014 18.5 3.0 1.4 8.9 0.0 4.8 5 1 0 5 5 5 1 Tetratricopeptide repeat DUF357 PF04010.13 gi|15921226|ref|NP_376895.1| - 0.0014 18.6 6.6 1.4 9.1 0.1 4.1 4 0 0 4 4 4 1 Protein of unknown function (DUF357) TPR_21 PF09976.9 gi|15921226|ref|NP_376895.1| - 0.0018 18.0 3.9 3.6 7.2 0.5 3.6 1 1 3 4 4 4 2 Tetratricopeptide repeat-like domain MIT PF04212.18 gi|15921226|ref|NP_376895.1| - 0.0027 17.7 0.1 0.0027 17.7 0.1 4.3 4 1 1 5 5 5 1 MIT (microtubule interacting and transport) domain HrpB1_HrpK PF09613.10 gi|15921226|ref|NP_376895.1| - 0.0035 17.0 0.0 14 5.4 0.0 3.8 3 1 1 4 4 4 0 Bacterial type III secretion protein (HrpB1_HrpK) BTAD PF03704.17 gi|15921226|ref|NP_376895.1| - 0.0036 17.7 0.0 7.2 7.0 0.0 3.2 3 0 0 3 3 3 0 Bacterial transcriptional activator domain DUF3856 PF12968.7 gi|15921226|ref|NP_376895.1| - 0.0083 16.2 0.9 9.1 6.3 0.0 3.7 2 2 2 4 4 4 0 Domain of Unknown Function (DUF3856) DUF5113 PF17140.4 gi|15921226|ref|NP_376895.1| - 0.011 15.6 4.9 0.4 10.5 0.2 2.8 3 0 0 3 3 3 0 Domain of unknown function (DUF5113) Alkyl_sulf_dimr PF14863.6 gi|15921226|ref|NP_376895.1| - 0.025 15.1 0.7 8.1 6.9 0.1 2.9 2 1 1 3 3 3 0 Alkyl sulfatase dimerisation NRBF2_MIT PF17169.4 gi|15921226|ref|NP_376895.1| - 0.066 13.4 0.7 9.4 6.5 0.0 2.8 2 1 1 3 3 3 0 MIT domain of nuclear receptor-binding factor 2 RPN7 PF10602.9 gi|15921226|ref|NP_376895.1| - 0.094 12.4 6.6 9.5 5.9 0.2 3.7 2 2 1 3 3 3 0 26S proteasome subunit RPN7 Wzy_C_2 PF11846.8 gi|15921226|ref|NP_376895.1| - 0.13 12.2 0.2 12 5.7 0.0 2.3 2 0 0 2 2 2 0 Virulence factor membrane-bound polymerase, C-terminal YfdX PF10938.8 gi|15921226|ref|NP_376895.1| - 0.2 11.6 2.4 4.3 7.2 0.2 3.2 2 1 0 3 3 3 0 YfdX protein AAA_31 PF13614.6 gi|15921228|ref|NP_376897.1| - 1.1e-10 41.7 0.1 5.1e-10 39.5 0.1 2.0 1 1 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|15921228|ref|NP_376897.1| - 3.1e-09 36.9 0.0 4.9e-09 36.3 0.0 1.3 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|15921228|ref|NP_376897.1| - 3.3e-09 36.6 0.0 7e-09 35.5 0.0 1.5 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase ArsA_ATPase PF02374.15 gi|15921228|ref|NP_376897.1| - 0.00014 21.2 1.0 0.00093 18.5 0.0 2.4 2 1 0 2 2 2 1 Anion-transporting ATPase MipZ PF09140.11 gi|15921228|ref|NP_376897.1| - 0.00022 20.6 0.0 0.0023 17.3 0.0 2.0 2 0 0 2 2 2 1 ATPase MipZ CBP_BcsQ PF06564.12 gi|15921228|ref|NP_376897.1| - 0.00052 19.6 0.0 0.0013 18.2 0.0 1.6 1 1 0 1 1 1 1 Cellulose biosynthesis protein BcsQ AAA PF00004.29 gi|15921228|ref|NP_376897.1| - 0.0009 19.7 0.2 0.0021 18.5 0.0 1.7 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) SRP54 PF00448.22 gi|15921228|ref|NP_376897.1| - 0.011 15.4 0.1 0.79 9.3 0.0 2.2 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain APS_kinase PF01583.20 gi|15921228|ref|NP_376897.1| - 0.029 14.3 0.0 0.058 13.3 0.0 1.5 1 0 0 1 1 1 0 Adenylylsulphate kinase IstB_IS21 PF01695.17 gi|15921228|ref|NP_376897.1| - 0.045 13.5 0.0 3.9 7.2 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein CLP1_P PF16575.5 gi|15921228|ref|NP_376897.1| - 0.097 12.5 0.1 0.45 10.3 0.0 2.0 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop NTP_transf_2 PF01909.23 gi|15921230|ref|NP_376899.1| - 2.3e-09 37.4 0.3 5.5e-09 36.2 0.3 1.7 1 1 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|15921230|ref|NP_376899.1| - 5.7e-07 29.5 0.2 1.1e-06 28.6 0.1 1.6 2 0 0 2 2 2 1 Polymerase beta, Nucleotidyltransferase Deltameth_res PF16020.5 gi|15921230|ref|NP_376899.1| - 0.014 15.2 0.4 0.34 10.8 0.1 2.6 2 1 1 3 3 3 0 Deltamethrin resistance AAA_14 PF13173.6 gi|15921231|ref|NP_376900.1| - 4.8e-32 110.7 0.1 1.2e-31 109.5 0.1 1.6 1 0 0 1 1 1 1 AAA domain DUF4143 PF13635.6 gi|15921231|ref|NP_376900.1| - 9.5e-14 51.6 0.1 3.4e-13 49.8 0.1 2.0 1 1 0 2 2 2 1 Domain of unknown function (DUF4143) ATPase_2 PF01637.18 gi|15921231|ref|NP_376900.1| - 4.7e-05 23.4 6.3 0.044 13.7 0.1 3.3 2 1 1 3 3 3 2 ATPase domain predominantly from Archaea AAA PF00004.29 gi|15921231|ref|NP_376900.1| - 0.019 15.4 0.0 0.051 14.0 0.0 1.7 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_18 PF13238.6 gi|15921231|ref|NP_376900.1| - 0.022 15.3 0.0 0.19 12.2 0.0 2.4 2 0 0 2 2 2 0 AAA domain HTH_23 PF13384.6 gi|15921231|ref|NP_376900.1| - 0.07 13.0 0.1 0.15 11.9 0.1 1.6 1 0 0 1 1 1 0 Homeodomain-like domain PPS_PS PF02006.16 gi|15921231|ref|NP_376900.1| - 0.073 12.6 0.0 0.18 11.4 0.0 1.6 1 0 0 1 1 1 0 Phosphopantothenate/pantothenate synthetase L51_S25_CI-B8 PF05047.16 gi|15921231|ref|NP_376900.1| - 0.11 12.5 0.0 0.37 10.7 0.0 2.0 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain VD10_N PF08476.10 gi|15921231|ref|NP_376900.1| - 0.12 12.0 0.0 0.3 10.8 0.0 1.6 1 0 0 1 1 1 0 Viral D10 N-terminal Nre_N PF04894.12 gi|15921232|ref|NP_376901.1| - 2e-97 326.2 0.0 2.7e-97 325.8 0.0 1.2 1 0 0 1 1 1 1 Archaeal Nre, N-terminal Nre_C PF04895.12 gi|15921232|ref|NP_376901.1| - 7.9e-35 119.1 0.0 1.3e-34 118.4 0.0 1.3 1 0 0 1 1 1 1 Archaeal Nre, C-terminal Nexin_C PF08628.12 gi|15921232|ref|NP_376901.1| - 0.025 15.1 0.1 0.95 10.1 0.0 2.3 2 0 0 2 2 2 0 Sorting nexin C terminal DUF3292 PF11696.8 gi|15921232|ref|NP_376901.1| - 0.18 10.2 0.1 0.24 9.7 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3292) Radical_SAM PF04055.21 gi|15921233|ref|NP_376902.1| - 1.1e-10 42.1 0.0 1.5e-10 41.7 0.0 1.2 1 0 0 1 1 1 1 Radical SAM superfamily DUF1848 PF08902.11 gi|15921233|ref|NP_376902.1| - 0.0012 18.6 7.4 0.0071 16.1 0.0 2.6 2 1 0 2 2 2 1 Domain of unknown function (DUF1848) Acetyltransf_18 PF18014.1 gi|15921235|ref|NP_376904.1| - 2e-19 69.7 0.0 2.4e-19 69.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Glyco_hydro_4 PF02056.16 gi|15921235|ref|NP_376904.1| - 0.076 12.6 0.0 0.09 12.3 0.0 1.1 1 0 0 1 1 1 0 Family 4 glycosyl hydrolase Acetyltransf_9 PF13527.7 gi|15921236|ref|NP_376905.1| - 4.8e-13 49.3 0.0 2.2e-12 47.2 0.0 1.8 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|15921236|ref|NP_376905.1| - 4.2e-11 43.1 0.0 6.6e-11 42.5 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_1 PF00583.25 gi|15921236|ref|NP_376905.1| - 1.9e-10 41.0 0.0 2.4e-10 40.7 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|15921236|ref|NP_376905.1| - 1.2e-09 38.2 0.0 1.4e-09 37.9 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain GNAT_acetyltran PF12746.7 gi|15921236|ref|NP_376905.1| - 0.0002 21.0 0.1 0.00022 20.9 0.1 1.1 1 0 0 1 1 1 1 GNAT acetyltransferase FR47 PF08445.10 gi|15921236|ref|NP_376905.1| - 0.00023 21.1 0.0 0.00055 19.8 0.0 1.7 1 1 0 1 1 1 1 FR47-like protein Acetyltransf_CG PF14542.6 gi|15921236|ref|NP_376905.1| - 0.03 14.4 0.0 0.083 13.0 0.0 1.7 1 1 1 2 2 2 0 GCN5-related N-acetyl-transferase Linocin_M18 PF04454.12 gi|15921237|ref|NP_376906.1| - 2.3e-12 46.7 0.0 4.4e-12 45.8 0.0 1.4 1 0 0 1 1 1 1 Encapsulating protein for peroxidase Ferritin PF00210.24 gi|15921237|ref|NP_376906.1| - 0.014 15.4 0.4 0.025 14.5 0.4 1.4 1 0 0 1 1 1 0 Ferritin-like domain Rubrerythrin PF02915.17 gi|15921237|ref|NP_376906.1| - 0.034 14.5 2.2 0.077 13.4 2.0 1.8 1 1 0 1 1 1 0 Rubrerythrin DUF4143 PF13635.6 gi|15921238|ref|NP_376907.1| - 1.3e-09 38.2 0.3 2.7e-09 37.2 0.3 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4143) AAA_14 PF13173.6 gi|15921239|ref|NP_376908.1| - 5.2e-17 62.1 0.0 5.9e-17 61.9 0.0 1.0 1 0 0 1 1 1 1 AAA domain SCP_3 PF17844.1 gi|15921239|ref|NP_376908.1| - 0.064 13.0 0.0 0.09 12.6 0.0 1.4 1 1 0 1 1 1 0 Bacterial SCP ortholog AAA_14 PF13173.6 gi|15921240|ref|NP_376909.1| - 0.0024 17.9 0.0 0.0024 17.9 0.0 1.0 1 0 0 1 1 1 1 AAA domain MOZART1 PF12554.8 gi|15921240|ref|NP_376909.1| - 0.026 14.3 0.1 0.053 13.3 0.1 1.4 1 0 0 1 1 1 0 Mitotic-spindle organizing gamma-tubulin ring associated SpoIIM PF01944.17 gi|15921241|ref|NP_376910.1| - 1.2e-09 38.4 20.0 1.5e-09 38.1 20.0 1.1 1 0 0 1 1 1 1 Stage II sporulation protein M Peptidase_M48 PF01435.18 gi|15921242|ref|NP_376911.1| - 7.8e-07 29.1 1.4 1.1e-06 28.5 0.0 2.0 2 0 0 2 2 2 1 Peptidase family M48 DUF3185 PF11381.8 gi|15921243|ref|NP_376912.1| - 0.11 12.6 7.3 2.6 8.1 2.5 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3185) OrfB_Zn_ribbon PF07282.11 gi|15921244|ref|NP_376913.1| - 1.4e-20 73.0 0.5 1.4e-20 73.0 0.5 2.4 3 0 0 3 3 3 1 Putative transposase DNA-binding domain OrfB_IS605 PF01385.19 gi|15921244|ref|NP_376913.1| - 0.0015 18.8 0.1 0.0032 17.7 0.1 1.5 1 0 0 1 1 1 1 Probable transposase Cupin_2 PF07883.11 gi|15921245|ref|NP_376914.1| - 1.4e-16 59.9 0.0 1.9e-16 59.5 0.0 1.2 1 0 0 1 1 1 1 Cupin domain MannoseP_isomer PF01050.18 gi|15921245|ref|NP_376914.1| - 2.1e-08 34.2 0.1 2.4e-08 34.0 0.1 1.1 1 0 0 1 1 1 1 Mannose-6-phosphate isomerase Cupin_1 PF00190.22 gi|15921245|ref|NP_376914.1| - 5.9e-07 29.2 0.0 6.9e-07 29.0 0.0 1.2 1 0 0 1 1 1 1 Cupin Cupin_3 PF05899.12 gi|15921245|ref|NP_376914.1| - 2.1e-05 24.1 0.1 3.8e-05 23.3 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF861) Ectoine_synth PF06339.12 gi|15921245|ref|NP_376914.1| - 2.2e-05 24.6 0.1 2.6e-05 24.4 0.1 1.1 1 0 0 1 1 1 1 Ectoine synthase AraC_binding PF02311.19 gi|15921245|ref|NP_376914.1| - 3.7e-05 23.7 0.0 4.8e-05 23.3 0.0 1.1 1 0 0 1 1 1 1 AraC-like ligand binding domain Cupin_7 PF12973.7 gi|15921245|ref|NP_376914.1| - 0.00041 20.2 0.0 0.00054 19.8 0.0 1.1 1 0 0 1 1 1 1 ChrR Cupin-like domain DUF4437 PF14499.6 gi|15921245|ref|NP_376914.1| - 0.0037 16.4 0.0 0.0044 16.2 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4437) DMSP_lyase PF16867.5 gi|15921245|ref|NP_376914.1| - 0.0055 16.4 0.0 0.0072 16.0 0.0 1.2 1 0 0 1 1 1 1 Dimethlysulfonioproprionate lyase Asp_Arg_Hydrox PF05118.15 gi|15921245|ref|NP_376914.1| - 0.01 15.7 0.0 0.015 15.1 0.0 1.3 1 1 0 1 1 1 0 Aspartyl/Asparaginyl beta-hydroxylase EutQ PF06249.12 gi|15921245|ref|NP_376914.1| - 0.02 14.7 0.0 0.024 14.4 0.0 1.1 1 0 0 1 1 1 0 Ethanolamine utilisation protein EutQ PCO_ADO PF07847.12 gi|15921245|ref|NP_376914.1| - 0.029 13.8 0.0 0.062 12.7 0.0 1.4 1 1 0 1 1 1 0 PCO_ADO Cupin_6 PF12852.7 gi|15921245|ref|NP_376914.1| - 0.031 14.0 0.0 0.036 13.8 0.0 1.1 1 0 0 1 1 1 0 Cupin KduI PF04962.12 gi|15921245|ref|NP_376914.1| - 0.068 12.5 0.0 0.079 12.3 0.0 1.1 1 0 0 1 1 1 0 KduI/IolB family Auxin_BP PF02041.16 gi|15921245|ref|NP_376914.1| - 0.089 12.5 0.0 0.099 12.3 0.0 1.3 1 0 0 1 1 1 0 Auxin binding protein MCPsignal PF00015.21 gi|15921246|ref|NP_376915.1| - 0.028 14.3 3.0 0.03 14.1 1.6 1.7 1 1 0 1 1 1 0 Methyl-accepting chemotaxis protein (MCP) signalling domain Phage_TAC_7 PF10109.9 gi|15921246|ref|NP_376915.1| - 0.069 13.3 0.3 0.21 11.8 0.1 1.9 2 0 0 2 2 2 0 Phage tail assembly chaperone proteins, E, or 41 or 14 PRP21_like_P PF12230.8 gi|15921248|ref|NP_376917.1| - 0.0012 18.8 0.1 0.0015 18.4 0.1 1.2 1 0 0 1 1 1 1 Pre-mRNA splicing factor PRP21 like protein Gmx_para_CXXCG PF09535.10 gi|15921248|ref|NP_376917.1| - 0.011 15.1 0.0 0.026 13.8 0.0 1.5 1 1 1 2 2 2 0 Protein of unknown function (Gmx_para_CXXCG) Glyco_hydro_35 PF01301.19 gi|15921248|ref|NP_376917.1| - 0.013 15.1 0.0 0.032 13.9 0.0 1.5 1 1 0 1 1 1 0 Glycosyl hydrolases family 35 zf-Di19 PF05605.12 gi|15921248|ref|NP_376917.1| - 0.18 12.1 0.1 0.3 11.4 0.1 1.3 1 0 0 1 1 1 0 Drought induced 19 protein (Di19), zinc-binding Aldose_epim PF01263.20 gi|15921249|ref|NP_376918.1| - 1.6e-40 139.3 0.0 3.2e-40 138.3 0.0 1.3 1 1 0 1 1 1 1 Aldose 1-epimerase Urease_beta PF00699.20 gi|15921249|ref|NP_376918.1| - 0.078 13.0 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 Urease beta subunit OppC_N PF12911.7 gi|15921250|ref|NP_376919.1| - 0.14 12.2 0.9 0.65 10.0 0.9 2.2 1 0 0 1 1 1 0 N-terminal TM domain of oligopeptide transport permease C MFS_1 PF07690.16 gi|15921252|ref|NP_376921.1| - 4.5e-53 180.4 57.5 1.1e-39 136.4 32.8 2.6 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|15921252|ref|NP_376921.1| - 3.1e-11 42.8 32.5 5.3e-11 42.1 11.9 4.1 2 2 0 3 3 3 2 Sugar (and other) transporter MFS_1_like PF12832.7 gi|15921252|ref|NP_376921.1| - 6.6e-09 35.1 28.4 3.6e-08 32.7 7.4 2.8 2 1 1 3 3 3 2 MFS_1 like family OATP PF03137.20 gi|15921252|ref|NP_376921.1| - 0.004 15.5 1.0 0.004 15.5 1.0 3.7 3 1 1 4 4 4 2 Organic Anion Transporter Polypeptide (OATP) family TENA_THI-4 PF03070.16 gi|15921253|ref|NP_376922.1| - 1.5e-41 142.5 0.1 1.7e-41 142.3 0.1 1.0 1 0 0 1 1 1 1 TENA/THI-4/PQQC family NAPRTase_N PF17767.1 gi|15921253|ref|NP_376922.1| - 0.029 14.7 0.1 0.053 13.9 0.1 1.4 1 0 0 1 1 1 0 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain Glyco_hydro_38N PF01074.22 gi|15921254|ref|NP_376923.1| - 3.8e-63 213.6 0.0 6.5e-63 212.8 0.0 1.4 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 N-terminal domain Glyco_hydro_38C PF07748.13 gi|15921254|ref|NP_376923.1| - 2.9e-56 190.9 0.0 5.6e-56 190.0 0.0 1.5 1 0 0 1 1 1 1 Glycosyl hydrolases family 38 C-terminal domain Alpha-mann_mid PF09261.11 gi|15921254|ref|NP_376923.1| - 1.5e-27 95.5 0.1 3.5e-27 94.4 0.1 1.6 1 0 0 1 1 1 1 Alpha mannosidase middle domain Glyco_hydro38C2 PF17677.1 gi|15921254|ref|NP_376923.1| - 2.6e-08 33.8 1.6 4e-08 33.2 0.3 2.1 2 0 0 2 2 2 1 Glycosyl hydrolases family 38 C-terminal beta sandwich domain PEGA PF08308.11 gi|15921254|ref|NP_376923.1| - 0.021 14.7 0.4 0.47 10.4 0.0 3.1 3 0 0 3 3 3 0 PEGA domain DUF4968 PF16338.5 gi|15921254|ref|NP_376923.1| - 1.8 8.9 5.1 7.8 6.9 0.1 3.3 3 0 0 3 3 3 0 Domain of unknown function (DUF4968) Oxidored_molyb PF00174.19 gi|15921256|ref|NP_376925.1| - 1.8e-37 128.6 0.1 3.4e-37 127.7 0.1 1.4 1 1 0 1 1 1 1 Oxidoreductase molybdopterin binding domain TAT_signal PF10518.9 gi|15921256|ref|NP_376925.1| - 0.3 11.0 0.3 0.5 10.3 0.3 1.4 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence Amidohydro_1 PF01979.20 gi|15921257|ref|NP_376926.1| - 4.2e-18 65.8 0.2 9.9e-18 64.6 0.2 1.6 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|15921257|ref|NP_376926.1| - 1e-05 25.2 0.0 0.61 9.5 0.0 3.0 3 0 0 3 3 3 3 Amidohydrolase family Trp_dioxygenase PF03301.13 gi|15921257|ref|NP_376926.1| - 0.00058 19.3 0.1 0.00092 18.6 0.1 1.2 1 0 0 1 1 1 1 Tryptophan 2,3-dioxygenase AA_permease_2 PF13520.6 gi|15921258|ref|NP_376927.1| - 2.2e-24 86.1 62.5 4e-24 85.2 62.5 1.3 1 1 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|15921258|ref|NP_376927.1| - 6e-07 28.4 59.7 9.7e-07 27.7 59.7 1.4 1 1 0 1 1 1 1 Amino acid permease Ald_Xan_dh_C2 PF02738.18 gi|15921259|ref|NP_376928.1| - 4.4e-87 292.8 0.0 2.8e-86 290.1 0.0 2.0 1 1 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 gi|15921259|ref|NP_376928.1| - 1.4e-07 31.9 0.0 4.1e-06 27.1 0.0 2.5 1 1 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain WhiA_N PF10298.9 gi|15921259|ref|NP_376928.1| - 0.058 13.5 0.1 0.28 11.2 0.0 2.1 2 0 0 2 2 2 0 WhiA N-terminal LAGLIDADG-like domain Nucleolin_bd PF16725.5 gi|15921259|ref|NP_376928.1| - 0.096 12.4 0.3 0.26 10.9 0.3 1.7 1 0 0 1 1 1 0 Nucleolin binding domain Amidohydro_3 PF07969.11 gi|15921260|ref|NP_376929.1| - 1.3e-08 34.8 0.0 9.8e-06 25.3 0.0 3.0 2 1 1 3 3 3 2 Amidohydrolase family Amidohydro_1 PF01979.20 gi|15921260|ref|NP_376929.1| - 2.6e-06 27.0 0.1 5e-06 26.1 0.1 1.6 1 1 0 1 1 1 1 Amidohydrolase family Metallophos PF00149.28 gi|15921261|ref|NP_376930.1| - 2.3e-09 38.0 0.8 8.4e-09 36.2 0.8 1.9 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|15921261|ref|NP_376930.1| - 4e-09 36.9 0.0 1.9e-07 31.4 0.0 2.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Metallophos_3 PF14582.6 gi|15921261|ref|NP_376930.1| - 4.3e-09 36.1 0.9 7.6e-06 25.4 0.2 2.7 2 1 0 2 2 2 2 Metallophosphoesterase, calcineurin superfamily DUF2226 PF09987.9 gi|15921261|ref|NP_376930.1| - 0.0088 15.4 0.0 0.019 14.3 0.0 1.5 1 1 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2226) AA_permease_2 PF13520.6 gi|15921263|ref|NP_376932.1| - 3.7e-13 49.1 61.2 5.3e-13 48.6 61.2 1.2 1 0 0 1 1 1 1 Amino acid permease DUF4112 PF13430.6 gi|15921263|ref|NP_376932.1| - 0.0091 16.3 2.4 0.02 15.2 0.8 2.5 2 0 0 2 2 2 1 Domain of unknown function (DUF4112) CN_hydrolase PF00795.22 gi|15921264|ref|NP_376933.1| - 2.3e-47 161.5 0.0 2.6e-47 161.4 0.0 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase FAD_binding_4 PF01565.23 gi|15921265|ref|NP_376934.1| - 2.2e-18 66.3 0.1 2.2e-17 63.1 0.1 2.3 1 1 0 1 1 1 1 FAD binding domain CBS PF00571.28 gi|15921265|ref|NP_376934.1| - 0.012 16.1 0.3 0.049 14.1 0.0 2.3 2 1 1 3 3 3 0 CBS domain Amidohydro_1 PF01979.20 gi|15921266|ref|NP_376935.1| - 2.6e-19 69.7 0.0 3.8e-19 69.2 0.0 1.2 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|15921266|ref|NP_376935.1| - 7.9e-12 45.4 0.0 5.9e-07 29.3 0.0 2.2 2 0 0 2 2 2 2 Amidohydrolase family Complex1_51K PF01512.17 gi|15921266|ref|NP_376935.1| - 0.053 13.4 0.0 0.11 12.3 0.0 1.5 1 0 0 1 1 1 0 Respiratory-chain NADH dehydrogenase 51 Kd subunit Urease_alpha PF00449.20 gi|15921266|ref|NP_376935.1| - 0.12 12.7 0.3 0.12 12.7 0.3 1.9 2 0 0 2 2 2 0 Urease alpha-subunit, N-terminal domain DUF547 PF04784.14 gi|15921266|ref|NP_376935.1| - 0.14 12.2 0.0 0.25 11.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function, DUF547 Rieske PF00355.26 gi|15921267|ref|NP_376936.1| - 5.5e-19 67.9 0.0 9.8e-19 67.1 0.0 1.4 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 gi|15921267|ref|NP_376936.1| - 4.6e-05 23.3 0.0 7.9e-05 22.5 0.0 1.4 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain Tube PF17212.3 gi|15921267|ref|NP_376936.1| - 0.046 13.8 0.0 0.079 13.0 0.0 1.3 1 0 0 1 1 1 0 Tail tubular protein RnlB_antitoxin PF15933.5 gi|15921268|ref|NP_376937.1| - 0.016 15.5 0.1 0.021 15.1 0.1 1.3 1 0 0 1 1 1 0 Antitoxin to bacterial toxin RNase LS or RnlA HTH_24 PF13412.6 gi|15921269|ref|NP_376938.1| - 1e-15 57.0 1.1 1.6e-15 56.4 1.1 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|15921269|ref|NP_376938.1| - 9.6e-11 41.3 0.1 1.4e-10 40.8 0.1 1.3 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain AsnC_trans_reg PF01037.21 gi|15921269|ref|NP_376938.1| - 2.3e-10 40.3 0.0 3.8e-10 39.6 0.0 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_20 PF12840.7 gi|15921269|ref|NP_376938.1| - 3.7e-08 33.3 0.0 6.4e-08 32.6 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|15921269|ref|NP_376938.1| - 4e-06 26.6 0.0 6.4e-06 25.9 0.0 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR PF01047.22 gi|15921269|ref|NP_376938.1| - 4.2e-06 26.6 0.0 9.7e-06 25.4 0.0 1.5 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|15921269|ref|NP_376938.1| - 3.8e-05 23.5 0.0 6.7e-05 22.7 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_23 PF13384.6 gi|15921269|ref|NP_376938.1| - 0.00074 19.3 0.0 0.0012 18.5 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_38 PF13936.6 gi|15921269|ref|NP_376938.1| - 0.0029 17.3 0.4 0.0049 16.6 0.4 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_34 PF13601.6 gi|15921269|ref|NP_376938.1| - 0.006 16.7 0.0 0.01 16.0 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain Rrf2 PF02082.20 gi|15921269|ref|NP_376938.1| - 0.006 16.9 0.2 0.029 14.7 0.0 2.1 2 1 0 2 2 2 1 Transcriptional regulator Fe_dep_repress PF01325.19 gi|15921269|ref|NP_376938.1| - 0.01 16.0 0.1 0.032 14.4 0.0 1.8 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain TrmB PF01978.19 gi|15921269|ref|NP_376938.1| - 0.011 15.7 0.2 0.022 14.6 0.2 1.5 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB UPF0122 PF04297.14 gi|15921269|ref|NP_376938.1| - 0.012 15.8 0.4 0.075 13.3 0.1 2.0 2 0 0 2 2 2 0 Putative helix-turn-helix protein, YlxM / p13 like HTH_28 PF13518.6 gi|15921269|ref|NP_376938.1| - 0.012 15.7 0.0 0.021 14.9 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_27 PF13463.6 gi|15921269|ref|NP_376938.1| - 0.014 15.9 0.2 0.034 14.7 0.1 1.6 2 0 0 2 2 1 0 Winged helix DNA-binding domain HTH_11 PF08279.12 gi|15921269|ref|NP_376938.1| - 0.014 15.3 0.1 0.035 14.1 0.1 1.6 1 0 0 1 1 1 0 HTH domain HTH_30 PF13556.6 gi|15921269|ref|NP_376938.1| - 0.021 14.6 0.0 0.036 13.9 0.0 1.3 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain HxlR PF01638.17 gi|15921269|ref|NP_376938.1| - 0.022 14.6 0.0 0.039 13.8 0.0 1.5 1 0 0 1 1 1 0 HxlR-like helix-turn-helix HTH_IclR PF09339.10 gi|15921269|ref|NP_376938.1| - 0.023 14.5 0.0 0.036 13.9 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain RuvB_C PF05491.13 gi|15921269|ref|NP_376938.1| - 0.023 14.6 0.1 0.053 13.4 0.1 1.6 1 0 0 1 1 1 0 RuvB C-terminal winged helix domain HTH_10 PF04967.12 gi|15921269|ref|NP_376938.1| - 0.032 14.0 0.3 0.077 12.8 0.1 1.7 2 0 0 2 2 2 0 HTH DNA binding domain CENP-B_N PF04218.13 gi|15921269|ref|NP_376938.1| - 0.033 13.8 0.0 0.061 13.0 0.0 1.5 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain Mga PF05043.13 gi|15921269|ref|NP_376938.1| - 0.039 14.6 0.0 0.079 13.6 0.0 1.6 1 0 0 1 1 1 0 Mga helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|15921269|ref|NP_376938.1| - 0.045 13.7 0.0 0.077 13.0 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_WhiA PF02650.14 gi|15921269|ref|NP_376938.1| - 0.056 13.8 0.1 0.11 12.9 0.1 1.5 1 0 0 1 1 1 0 WhiA C-terminal HTH domain DUF3400 PF11880.8 gi|15921269|ref|NP_376938.1| - 0.065 12.8 0.1 3.8 7.1 0.0 2.6 3 0 0 3 3 2 0 Domain of unknown function (DUF3400) DUF2250 PF10007.9 gi|15921269|ref|NP_376938.1| - 0.07 13.2 0.4 0.39 10.9 0.1 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) Cyanate_lyase PF02560.14 gi|15921270|ref|NP_376939.1| - 2.2e-28 97.9 0.3 4.9e-28 96.8 0.1 1.7 2 0 0 2 2 2 1 Cyanate lyase C-terminal domain HTH_3 PF01381.22 gi|15921270|ref|NP_376939.1| - 0.039 14.0 0.3 0.063 13.3 0.3 1.3 1 0 0 1 1 1 0 Helix-turn-helix UreD PF01774.17 gi|15921271|ref|NP_376940.1| - 7.6e-10 39.1 0.0 8.6e-10 38.9 0.0 1.1 1 0 0 1 1 1 1 UreD urease accessory protein cobW PF02492.19 gi|15921272|ref|NP_376941.1| - 7.6e-31 107.1 0.0 8.9e-31 106.8 0.0 1.1 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain MeaB PF03308.16 gi|15921272|ref|NP_376941.1| - 4.9e-09 35.6 0.7 1.1e-08 34.4 0.7 1.5 1 1 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB GTP_EFTU PF00009.27 gi|15921272|ref|NP_376941.1| - 2.7e-05 23.8 0.0 0.048 13.2 0.0 2.4 2 0 0 2 2 2 2 Elongation factor Tu GTP binding domain NTPase_1 PF03266.15 gi|15921272|ref|NP_376941.1| - 0.00077 19.4 0.1 0.0011 18.9 0.1 1.4 1 0 0 1 1 1 1 NTPase MobB PF03205.14 gi|15921272|ref|NP_376941.1| - 0.0016 18.3 0.3 0.0063 16.4 0.1 2.0 1 1 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_18 PF13238.6 gi|15921272|ref|NP_376941.1| - 0.0023 18.5 0.3 0.0035 17.9 0.3 1.5 1 1 0 1 1 1 1 AAA domain SRP54 PF00448.22 gi|15921272|ref|NP_376941.1| - 0.0027 17.4 0.1 0.011 15.3 0.0 2.0 3 1 0 3 3 3 1 SRP54-type protein, GTPase domain MMR_HSR1_Xtn PF16897.5 gi|15921272|ref|NP_376941.1| - 0.0035 17.3 0.0 0.0067 16.4 0.0 1.5 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain AAA_22 PF13401.6 gi|15921272|ref|NP_376941.1| - 0.0036 17.6 0.0 0.025 14.9 0.0 2.1 2 1 0 2 2 2 1 AAA domain ATP_bind_1 PF03029.17 gi|15921272|ref|NP_376941.1| - 0.0043 16.9 0.1 0.026 14.3 0.0 2.0 2 0 0 2 2 2 1 Conserved hypothetical ATP binding protein ABC_tran PF00005.27 gi|15921272|ref|NP_376941.1| - 0.0045 17.5 0.0 0.007 16.9 0.0 1.4 1 0 0 1 1 1 1 ABC transporter RsgA_GTPase PF03193.16 gi|15921272|ref|NP_376941.1| - 0.0059 16.5 0.2 2.6 7.9 0.0 2.5 3 0 0 3 3 3 1 RsgA GTPase CLP1_P PF16575.5 gi|15921272|ref|NP_376941.1| - 0.031 14.0 0.0 0.054 13.3 0.0 1.4 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_16 PF13191.6 gi|15921272|ref|NP_376941.1| - 0.041 14.3 0.0 0.075 13.4 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain AAA_23 PF13476.6 gi|15921272|ref|NP_376941.1| - 0.049 14.1 0.0 0.12 12.9 0.0 1.6 2 0 0 2 2 2 0 AAA domain MMR_HSR1 PF01926.23 gi|15921272|ref|NP_376941.1| - 0.072 13.2 0.1 0.26 11.4 0.1 2.1 1 1 0 1 1 1 0 50S ribosome-binding GTPase dNK PF01712.19 gi|15921272|ref|NP_376941.1| - 0.074 12.9 0.2 0.12 12.2 0.2 1.3 1 0 0 1 1 1 0 Deoxynucleoside kinase PRK PF00485.18 gi|15921272|ref|NP_376941.1| - 0.075 12.8 0.0 0.12 12.1 0.0 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family DUF87 PF01935.17 gi|15921272|ref|NP_376941.1| - 0.085 12.9 0.2 0.16 12.1 0.2 1.4 1 0 0 1 1 1 0 Helicase HerA, central domain PduV-EutP PF10662.9 gi|15921272|ref|NP_376941.1| - 0.16 11.7 1.3 0.61 9.8 0.1 2.5 2 1 1 3 3 3 0 Ethanolamine utilisation - propanediol utilisation Herpes_ori_bp PF02399.15 gi|15921272|ref|NP_376941.1| - 0.24 9.4 0.0 0.4 8.7 0.0 1.2 1 0 0 1 1 1 0 Origin of replication binding protein UreF PF01730.16 gi|15921273|ref|NP_376942.1| - 8.5e-15 55.5 0.0 1.1e-14 55.2 0.0 1.1 1 0 0 1 1 1 1 UreF Prolamin_like PF05617.11 gi|15921273|ref|NP_376942.1| - 0.071 13.3 0.0 0.11 12.7 0.0 1.3 1 0 0 1 1 1 0 Prolamin-like UreE_N PF02814.15 gi|15921274|ref|NP_376943.1| - 1.3e-06 27.8 0.0 1.9e-06 27.3 0.0 1.2 1 0 0 1 1 1 1 UreE urease accessory protein, N-terminal domain UreE_C PF05194.12 gi|15921274|ref|NP_376943.1| - 0.16 12.5 0.0 0.24 11.9 0.0 1.4 1 0 0 1 1 1 0 UreE urease accessory protein, C-terminal domain Amidohydro_1 PF01979.20 gi|161751095|ref|NP_376944.2| - 7.9e-59 199.7 0.6 1.1e-58 199.2 0.6 1.1 1 0 0 1 1 1 1 Amidohydrolase family Urease_alpha PF00449.20 gi|161751095|ref|NP_376944.2| - 5.9e-47 158.9 1.7 7.1e-47 158.7 0.7 1.6 2 0 0 2 2 2 1 Urease alpha-subunit, N-terminal domain Amidohydro_3 PF07969.11 gi|161751095|ref|NP_376944.2| - 9.5e-11 41.8 0.4 5e-05 23.0 0.0 3.1 3 0 0 3 3 3 2 Amidohydrolase family Urease_beta PF00699.20 gi|15921276|ref|NP_376945.1| - 1.7e-39 133.8 0.3 4.8e-39 132.3 0.1 1.8 2 0 0 2 2 2 1 Urease beta subunit Urease_gamma PF00547.18 gi|15921276|ref|NP_376945.1| - 5.9e-39 132.4 0.3 1.4e-38 131.1 0.2 1.6 2 0 0 2 2 2 1 Urease, gamma subunit Glyco_hydro_32N PF00251.20 gi|15921276|ref|NP_376945.1| - 0.19 11.3 0.0 15 5.1 0.0 2.0 1 1 1 2 2 2 0 Glycosyl hydrolases family 32 N-terminal domain Metallophos_2 PF12850.7 gi|15921277|ref|NP_376946.1| - 1e-07 32.3 0.2 0.0008 19.6 0.0 2.4 2 1 0 2 2 2 2 Calcineurin-like phosphoesterase superfamily domain Metallophos PF00149.28 gi|15921277|ref|NP_376946.1| - 1.8e-07 31.9 5.8 1.6e-06 28.8 5.8 2.3 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_3 PF14582.6 gi|15921277|ref|NP_376946.1| - 8.1e-05 22.1 2.4 0.00064 19.1 0.2 2.5 2 2 0 2 2 2 1 Metallophosphoesterase, calcineurin superfamily Cellulase PF00150.18 gi|15921277|ref|NP_376946.1| - 0.014 14.9 1.4 0.07 12.5 0.6 2.0 2 0 0 2 2 2 0 Cellulase (glycosyl hydrolase family 5) DUF3364 PF11844.8 gi|15921277|ref|NP_376946.1| - 0.09 13.0 1.6 0.23 11.7 1.6 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF3364) APP_E2 PF12925.7 gi|15921277|ref|NP_376946.1| - 0.15 11.7 0.5 0.27 10.9 0.5 1.3 1 0 0 1 1 1 0 E2 domain of amyloid precursor protein Amidinotransf PF02274.17 gi|15921278|ref|NP_376947.1| - 5e-52 177.1 0.0 5.7e-52 176.9 0.0 1.0 1 0 0 1 1 1 1 Amidinotransferase Cep57_CLD_2 PF14197.6 gi|15921278|ref|NP_376947.1| - 0.0079 16.3 1.3 0.017 15.2 1.3 1.4 1 0 0 1 1 1 1 Centrosome localisation domain of PPC89 Ldr_toxin PF13940.6 gi|15921279|ref|NP_376948.1| - 0.043 13.9 0.1 0.22 11.6 0.1 2.3 1 0 0 1 1 1 0 Toxin Ldr, type I toxin-antitoxin system AA_permease PF00324.21 gi|15921279|ref|NP_376948.1| - 0.6 8.6 56.8 0.88 8.1 56.8 1.3 1 0 0 1 1 1 0 Amino acid permease DUF2704 PF10866.8 gi|15921280|ref|NP_376949.1| - 0.026 14.4 0.1 0.026 14.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2704) Cytochrom_B558a PF05038.13 gi|15921282|ref|NP_376951.1| - 0.07 12.7 0.3 0.13 11.8 0.3 1.4 1 0 0 1 1 1 0 Cytochrome Cytochrome b558 alpha-subunit DUF5423 PF17461.2 gi|15921282|ref|NP_376951.1| - 4.5 6.0 7.0 4.5 6.0 2.8 2.0 2 0 0 2 2 2 0 Family of unknown function (DUF5423) ABC_tran PF00005.27 gi|15921283|ref|NP_376952.1| - 2.1e-26 93.1 0.2 4.9e-26 91.9 0.0 1.7 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|15921283|ref|NP_376952.1| - 1e-11 45.2 1.7 2.1e-05 24.5 0.0 2.4 2 1 1 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|15921283|ref|NP_376952.1| - 1.6e-06 28.8 4.4 4.6e-06 27.3 4.4 1.7 1 1 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|15921283|ref|NP_376952.1| - 7.3e-06 25.6 0.4 0.044 13.2 0.0 2.2 1 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|15921283|ref|NP_376952.1| - 0.00016 21.5 5.2 0.068 12.9 0.1 2.6 2 1 1 3 3 3 2 AAA ATPase domain AAA_29 PF13555.6 gi|15921283|ref|NP_376952.1| - 0.00038 20.1 0.1 0.0007 19.3 0.1 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|15921283|ref|NP_376952.1| - 0.00063 20.0 0.0 0.0015 18.8 0.0 1.6 1 1 0 1 1 1 1 AAA domain DUF4162 PF13732.6 gi|15921283|ref|NP_376952.1| - 0.0011 19.6 0.1 0.0033 18.1 0.1 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_19 PF13245.6 gi|15921283|ref|NP_376952.1| - 0.0012 19.2 0.0 0.26 11.6 0.0 2.3 2 0 0 2 2 2 1 AAA domain NACHT PF05729.12 gi|15921283|ref|NP_376952.1| - 0.002 18.0 0.6 0.025 14.5 0.2 2.6 2 2 1 3 3 3 1 NACHT domain AAA_27 PF13514.6 gi|15921283|ref|NP_376952.1| - 0.0022 17.6 0.0 0.0038 16.9 0.0 1.3 1 0 0 1 1 1 1 AAA domain AAA_30 PF13604.6 gi|15921283|ref|NP_376952.1| - 0.018 14.8 0.0 0.028 14.2 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|15921283|ref|NP_376952.1| - 0.019 15.4 0.0 0.041 14.3 0.0 1.8 1 1 0 1 1 1 0 AAA ATPase domain RsgA_GTPase PF03193.16 gi|15921283|ref|NP_376952.1| - 0.022 14.6 0.1 0.055 13.4 0.1 1.6 1 0 0 1 1 1 0 RsgA GTPase AAA_13 PF13166.6 gi|15921283|ref|NP_376952.1| - 0.048 12.3 0.0 0.072 11.7 0.0 1.2 1 0 0 1 1 1 0 AAA domain DLIC PF05783.11 gi|15921283|ref|NP_376952.1| - 0.049 12.5 0.1 0.078 11.8 0.1 1.2 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) DUF3584 PF12128.8 gi|15921283|ref|NP_376952.1| - 0.058 10.9 0.1 0.086 10.4 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) DnaB_C PF03796.15 gi|15921283|ref|NP_376952.1| - 0.094 12.0 0.1 0.21 10.9 0.0 1.6 2 0 0 2 2 2 0 DnaB-like helicase C terminal domain MMR_HSR1 PF01926.23 gi|15921283|ref|NP_376952.1| - 0.098 12.7 1.0 0.19 11.8 0.3 2.0 2 1 0 2 2 1 0 50S ribosome-binding GTPase NTPase_1 PF03266.15 gi|15921283|ref|NP_376952.1| - 0.11 12.4 3.4 0.79 9.6 0.4 3.0 2 2 0 2 2 2 0 NTPase T2SSE PF00437.20 gi|15921283|ref|NP_376952.1| - 0.11 11.5 0.2 0.24 10.4 0.2 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein cobW PF02492.19 gi|15921283|ref|NP_376952.1| - 0.15 11.6 0.5 0.33 10.5 0.5 1.6 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_14 PF13173.6 gi|15921283|ref|NP_376952.1| - 0.17 11.9 1.6 0.44 10.6 0.3 2.4 1 1 1 2 2 2 0 AAA domain DUF131 PF01998.17 gi|15921285|ref|NP_376954.1| - 0.052 13.2 0.5 0.052 13.2 0.5 1.5 2 0 0 2 2 2 0 Protein of unknown function DUF131 DHHC PF01529.20 gi|15921285|ref|NP_376954.1| - 0.063 13.4 0.4 0.076 13.1 0.4 1.2 1 0 0 1 1 1 0 DHHC palmitoyltransferase DUF973 PF06157.11 gi|15921287|ref|NP_376956.1| - 2.3e-92 309.4 45.6 2.6e-92 309.2 45.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF973) DUF4493 PF14900.6 gi|15921287|ref|NP_376956.1| - 0.052 13.4 0.3 0.069 13.0 0.3 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4493) DUF996 PF06195.13 gi|15921287|ref|NP_376956.1| - 0.18 12.1 43.4 0.032 14.5 25.1 2.9 1 1 1 2 2 2 0 Protein of unknown function (DUF996) DUF87 PF01935.17 gi|15921289|ref|NP_376958.1| - 2.7e-10 40.7 4.3 2.3e-09 37.7 2.2 2.6 2 1 0 2 2 1 1 Helicase HerA, central domain AAA PF00004.29 gi|15921289|ref|NP_376958.1| - 9.5e-09 35.8 0.2 7.5e-05 23.2 0.1 2.7 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) TrwB_AAD_bind PF10412.9 gi|15921289|ref|NP_376958.1| - 4.5e-07 29.1 0.0 7.8e-07 28.3 0.0 1.3 1 0 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain AAA_22 PF13401.6 gi|15921289|ref|NP_376958.1| - 2e-05 24.9 0.0 0.001 19.3 0.0 2.6 2 0 0 2 2 2 1 AAA domain FtsK_SpoIIIE PF01580.18 gi|15921289|ref|NP_376958.1| - 3e-05 23.5 0.4 8.9e-05 22.0 0.2 1.8 2 0 0 2 2 2 1 FtsK/SpoIIIE family AAA_16 PF13191.6 gi|15921289|ref|NP_376958.1| - 4.3e-05 23.9 0.0 0.00063 20.2 0.0 2.3 2 1 0 2 2 2 1 AAA ATPase domain T2SSE PF00437.20 gi|15921289|ref|NP_376958.1| - 0.0008 18.5 0.2 0.0018 17.4 0.2 1.5 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_18 PF13238.6 gi|15921289|ref|NP_376958.1| - 0.0013 19.3 0.2 0.02 15.4 0.0 2.5 2 0 0 2 2 2 1 AAA domain NACHT PF05729.12 gi|15921289|ref|NP_376958.1| - 0.0026 17.7 0.1 0.058 13.3 0.0 2.4 2 0 0 2 2 2 1 NACHT domain AAA_10 PF12846.7 gi|15921289|ref|NP_376958.1| - 0.0031 16.5 0.0 1.1 8.1 0.0 2.3 2 0 0 2 2 2 2 AAA-like domain G-alpha PF00503.20 gi|15921289|ref|NP_376958.1| - 0.0034 16.6 0.6 0.081 12.1 0.0 2.2 2 0 0 2 2 2 1 G-protein alpha subunit DUF853 PF05872.12 gi|15921289|ref|NP_376958.1| - 0.0049 15.5 0.1 0.86 8.1 0.0 2.1 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF853) DEAD PF00270.29 gi|15921289|ref|NP_376958.1| - 0.0083 15.9 0.0 3.4 7.4 0.0 2.6 2 1 0 2 2 2 1 DEAD/DEAH box helicase ABC_tran PF00005.27 gi|15921289|ref|NP_376958.1| - 0.0085 16.6 0.0 0.026 15.0 0.0 1.8 1 0 0 1 1 1 1 ABC transporter cobW PF02492.19 gi|15921289|ref|NP_376958.1| - 0.024 14.2 0.3 0.051 13.2 0.3 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain NB-ARC PF00931.22 gi|15921289|ref|NP_376958.1| - 0.031 13.4 0.0 0.064 12.4 0.0 1.4 1 0 0 1 1 1 0 NB-ARC domain AAA_29 PF13555.6 gi|15921289|ref|NP_376958.1| - 0.032 14.0 0.0 0.066 13.0 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain PduV-EutP PF10662.9 gi|15921289|ref|NP_376958.1| - 0.032 14.0 0.1 0.083 12.6 0.1 1.7 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation AAA_24 PF13479.6 gi|15921289|ref|NP_376958.1| - 0.042 13.6 0.0 0.091 12.5 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_21 PF13304.6 gi|15921289|ref|NP_376958.1| - 0.042 13.7 1.0 0.18 11.6 0.0 2.4 2 1 1 3 3 3 0 AAA domain, putative AbiEii toxin, Type IV TA system ATPase_2 PF01637.18 gi|15921289|ref|NP_376958.1| - 0.045 13.7 0.3 0.34 10.8 0.0 2.2 2 0 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_7 PF12775.7 gi|15921289|ref|NP_376958.1| - 0.058 12.9 0.1 0.13 11.8 0.1 1.5 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_14 PF13173.6 gi|15921289|ref|NP_376958.1| - 0.069 13.2 0.2 1.5 8.9 0.0 2.5 2 0 0 2 2 2 0 AAA domain Septin PF00735.18 gi|15921289|ref|NP_376958.1| - 0.08 12.2 0.1 0.18 11.1 0.1 1.5 1 0 0 1 1 1 0 Septin Viral_helicase1 PF01443.18 gi|15921289|ref|NP_376958.1| - 0.083 12.6 0.0 0.15 11.7 0.0 1.4 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase DUF2075 PF09848.9 gi|15921289|ref|NP_376958.1| - 0.099 11.9 0.5 6.7 5.8 0.0 2.4 3 0 0 3 3 3 0 Uncharacterized conserved protein (DUF2075) AAA_19 PF13245.6 gi|15921289|ref|NP_376958.1| - 0.1 12.9 0.0 0.3 11.4 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|15921289|ref|NP_376958.1| - 0.13 12.5 0.0 0.24 11.7 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_33 PF13671.6 gi|15921289|ref|NP_376958.1| - 0.14 12.4 0.0 0.39 10.9 0.0 1.7 2 0 0 2 2 1 0 AAA domain Mg_chelatase PF01078.21 gi|15921289|ref|NP_376958.1| - 0.21 11.0 0.1 0.41 10.0 0.1 1.4 1 0 0 1 1 1 0 Magnesium chelatase, subunit ChlI AAA_23 PF13476.6 gi|15921289|ref|NP_376958.1| - 2.3 8.7 5.3 1.1 9.7 0.1 2.4 2 1 0 2 2 2 0 AAA domain NurA PF09376.10 gi|15921290|ref|NP_376959.1| - 1.8e-27 96.6 2.7 2.3e-27 96.3 2.7 1.1 1 0 0 1 1 1 1 NurA domain Cas_DxTHG PF09455.10 gi|15921291|ref|NP_376960.1| - 1.8e-29 103.5 10.6 2.3e-29 103.1 10.6 1.1 1 0 0 1 1 1 1 CRISPR-associated (Cas) DxTHG family TENA_THI-4 PF03070.16 gi|15921292|ref|NP_376961.1| - 1.6e-07 31.4 1.8 1.4e-06 28.2 1.7 2.3 1 1 0 1 1 1 1 TENA/THI-4/PQQC family DUF4298 PF14131.6 gi|15921292|ref|NP_376961.1| - 0.012 15.6 0.7 0.13 12.3 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4298) TrmB PF01978.19 gi|15921294|ref|NP_376963.1| - 9.5e-11 41.4 0.4 1.6e-10 40.7 0.4 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.12 gi|15921294|ref|NP_376963.1| - 1.9e-09 37.3 0.2 5.4e-09 35.9 0.2 1.7 2 0 0 2 2 2 1 HTH domain MarR PF01047.22 gi|15921294|ref|NP_376963.1| - 1.2e-06 28.3 0.1 2e-06 27.6 0.1 1.4 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|15921294|ref|NP_376963.1| - 1.4e-06 27.8 0.5 2.6e-06 26.9 0.5 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|15921294|ref|NP_376963.1| - 7.4e-05 22.5 0.2 0.00012 21.8 0.2 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_Mga PF08280.11 gi|15921294|ref|NP_376963.1| - 0.00011 22.2 1.9 0.00021 21.2 1.9 1.5 1 0 0 1 1 1 1 M protein trans-acting positive regulator (MGA) HTH domain DUF3942 PF13078.6 gi|15921294|ref|NP_376963.1| - 0.00016 22.0 0.8 0.00021 21.6 0.8 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3942) Rrf2 PF02082.20 gi|15921294|ref|NP_376963.1| - 0.0002 21.6 0.0 0.00038 20.8 0.0 1.4 1 0 0 1 1 1 1 Transcriptional regulator MarR_2 PF12802.7 gi|15921294|ref|NP_376963.1| - 0.0004 20.2 0.0 0.00065 19.5 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.6 gi|15921294|ref|NP_376963.1| - 0.00048 20.2 0.4 0.0016 18.5 0.2 1.8 1 1 1 2 2 2 1 Winged helix DNA-binding domain HTH_28 PF13518.6 gi|15921294|ref|NP_376963.1| - 0.00055 20.0 0.0 0.00081 19.5 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_IclR PF09339.10 gi|15921294|ref|NP_376963.1| - 0.0019 17.9 0.0 0.0038 17.0 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_27 PF13463.6 gi|15921294|ref|NP_376963.1| - 0.0051 17.3 0.4 0.01 16.3 0.1 1.6 2 0 0 2 2 1 1 Winged helix DNA-binding domain Fe_dep_repress PF01325.19 gi|15921294|ref|NP_376963.1| - 0.006 16.8 0.1 0.017 15.3 0.1 1.8 1 1 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain PheRS_DBD1 PF18552.1 gi|15921294|ref|NP_376963.1| - 0.0069 16.1 0.0 0.012 15.3 0.0 1.4 1 0 0 1 1 1 1 PheRS DNA binding domain 1 B-block_TFIIIC PF04182.12 gi|15921294|ref|NP_376963.1| - 0.0095 16.1 0.2 0.013 15.7 0.2 1.3 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC GntR PF00392.21 gi|15921294|ref|NP_376963.1| - 0.021 14.5 0.1 0.13 11.9 0.0 2.0 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family HTH_Crp_2 PF13545.6 gi|15921294|ref|NP_376963.1| - 0.026 14.5 0.1 0.039 13.9 0.1 1.3 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_36 PF13730.6 gi|15921294|ref|NP_376963.1| - 0.026 14.5 0.2 0.052 13.5 0.2 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Tnp_Tc3_1 PF11427.8 gi|15921294|ref|NP_376963.1| - 0.028 14.3 0.0 0.049 13.5 0.0 1.4 1 0 0 1 1 1 0 Tc3 transposase TFIIE_alpha PF02002.17 gi|15921294|ref|NP_376963.1| - 0.029 14.2 2.5 0.041 13.8 2.5 1.2 1 0 0 1 1 1 0 TFIIE alpha subunit SelB-wing_3 PF09107.11 gi|15921294|ref|NP_376963.1| - 0.03 13.9 0.0 0.062 12.9 0.0 1.5 1 0 0 1 1 1 0 Elongation factor SelB, winged helix Sigma70_r4 PF04545.16 gi|15921294|ref|NP_376963.1| - 0.032 13.8 0.0 0.069 12.7 0.0 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_CodY PF08222.11 gi|15921294|ref|NP_376963.1| - 0.035 13.7 0.0 0.07 12.7 0.0 1.5 1 0 0 1 1 1 0 CodY helix-turn-helix domain HTH_10 PF04967.12 gi|15921294|ref|NP_376963.1| - 0.042 13.7 0.0 0.08 12.8 0.0 1.4 1 0 0 1 1 1 0 HTH DNA binding domain HTH_WhiA PF02650.14 gi|15921294|ref|NP_376963.1| - 0.046 14.0 0.9 0.11 12.8 0.3 1.8 2 1 0 2 2 2 0 WhiA C-terminal HTH domain HTH_46 PF15977.5 gi|15921294|ref|NP_376963.1| - 0.05 13.6 0.5 0.29 11.2 0.2 2.3 2 0 0 2 2 2 0 Winged helix-turn-helix DNA binding DUF2250 PF10007.9 gi|15921294|ref|NP_376963.1| - 0.055 13.6 0.2 0.12 12.6 0.2 1.5 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_DeoR PF08220.12 gi|15921294|ref|NP_376963.1| - 0.074 12.8 0.0 0.14 11.9 0.0 1.5 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain HTH_23 PF13384.6 gi|15921294|ref|NP_376963.1| - 0.12 12.2 0.0 0.22 11.3 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain 4HBT_2 PF13279.6 gi|15921296|ref|NP_376965.1| - 1e-07 32.5 0.0 1.2e-07 32.2 0.0 1.1 1 0 0 1 1 1 1 Thioesterase-like superfamily 4HBT PF03061.22 gi|15921296|ref|NP_376965.1| - 1.6e-06 28.4 0.0 2.3e-06 27.8 0.0 1.3 1 0 0 1 1 1 1 Thioesterase superfamily Acyl-ACP_TE PF01643.17 gi|15921296|ref|NP_376965.1| - 0.064 12.5 0.1 0.077 12.3 0.1 1.1 1 0 0 1 1 1 0 Acyl-ACP thioesterase ParA PF10609.9 gi|15921297|ref|NP_376966.1| - 9e-34 117.0 0.2 1.1e-33 116.8 0.2 1.1 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase AAA_31 PF13614.6 gi|15921297|ref|NP_376966.1| - 1.1e-06 28.7 1.9 1.3e-05 25.1 1.9 2.1 1 1 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|15921297|ref|NP_376966.1| - 6.9e-05 22.9 0.0 0.00011 22.3 0.0 1.4 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ArsA_ATPase PF02374.15 gi|15921297|ref|NP_376966.1| - 0.001 18.4 2.9 0.44 9.7 0.5 3.1 1 1 2 3 3 3 2 Anion-transporting ATPase MipZ PF09140.11 gi|15921297|ref|NP_376966.1| - 0.052 12.8 0.0 0.075 12.3 0.0 1.3 1 0 0 1 1 1 0 ATPase MipZ HypA PF01155.19 gi|15921298|ref|NP_376967.1| - 3.4e-20 72.1 0.0 4.1e-20 71.9 0.0 1.1 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA DUF3797 PF12677.7 gi|15921298|ref|NP_376967.1| - 0.0065 16.3 0.1 1.3 9.0 0.0 2.4 2 0 0 2 2 2 2 Domain of unknown function (DUF3797) TFCD_C PF12612.8 gi|15921298|ref|NP_376967.1| - 0.015 15.2 0.1 0.018 14.9 0.1 1.1 1 0 0 1 1 1 0 Tubulin folding cofactor D C terminal zf-RRPl_C4 PF17026.5 gi|15921298|ref|NP_376967.1| - 0.074 13.2 0.1 0.21 11.7 0.0 1.8 2 0 0 2 2 2 0 Putative ribonucleoprotein zinc-finger pf C4 type zf-ribbon_3 PF13248.6 gi|15921298|ref|NP_376967.1| - 0.085 12.3 0.1 0.13 11.7 0.1 1.3 1 0 0 1 1 1 0 zinc-ribbon domain FliS PF02561.14 gi|15921299|ref|NP_376968.1| - 0.29 11.4 2.9 11 6.3 0.6 2.3 2 0 0 2 2 2 0 Flagellar protein FliS Y1_Tnp PF01797.16 gi|15921300|ref|NP_376969.1| - 3.8e-42 143.2 0.0 4.4e-42 143.0 0.0 1.0 1 0 0 1 1 1 1 Transposase IS200 like OrfB_IS605 PF01385.19 gi|15921302|ref|NP_376971.1| - 3.9e-35 120.7 0.4 5.6e-35 120.2 0.4 1.2 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|15921302|ref|NP_376971.1| - 1.1e-19 70.0 0.0 2.2e-19 69.2 0.0 1.5 1 0 0 1 1 1 1 Putative transposase DNA-binding domain RuvX PF03652.15 gi|15921302|ref|NP_376971.1| - 3.8e-06 27.3 0.0 6.3e-06 26.6 0.0 1.3 1 0 0 1 1 1 1 Holliday junction resolvase VWD PF00094.25 gi|15921302|ref|NP_376971.1| - 0.067 13.5 0.3 0.24 11.7 0.3 1.9 1 1 1 2 2 2 0 von Willebrand factor type D domain MFS_1 PF07690.16 gi|15921303|ref|NP_376972.1| - 1.9e-27 96.1 45.8 3.1e-27 95.4 45.8 1.3 1 0 0 1 1 1 1 Major Facilitator Superfamily MFS_1 PF07690.16 gi|15921304|ref|NP_376973.1| - 1.3e-21 77.0 47.3 1.3e-21 77.0 47.3 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|15921304|ref|NP_376973.1| - 2.5e-17 62.9 37.1 1.8e-16 60.0 15.9 3.5 1 1 1 3 3 3 3 Sugar (and other) transporter SfsA PF03749.13 gi|15921305|ref|NP_376974.1| - 1.6e-36 125.2 0.0 2.2e-36 124.8 0.0 1.2 1 0 0 1 1 1 1 Sugar fermentation stimulation protein RE domain SfsA_N PF17746.1 gi|15921305|ref|NP_376974.1| - 6.4e-16 58.3 0.2 1.2e-15 57.4 0.2 1.4 1 0 0 1 1 1 1 SfsA N-terminal OB domain PH_3 PF14593.6 gi|15921305|ref|NP_376974.1| - 0.071 13.2 0.1 0.77 9.9 0.0 2.2 2 0 0 2 2 2 0 PH domain Resolvase PF00239.21 gi|15921306|ref|NP_376975.1| - 9.9e-17 61.4 0.0 1.3e-16 61.1 0.0 1.1 1 0 0 1 1 1 1 Resolvase, N terminal domain HTH_17 PF12728.7 gi|15921306|ref|NP_376975.1| - 0.11 12.8 0.0 0.24 11.6 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain OrfB_Zn_ribbon PF07282.11 gi|15921307|ref|NP_376976.1| - 6.5e-22 77.2 0.1 1.5e-21 76.1 0.1 1.6 1 0 0 1 1 1 1 Putative transposase DNA-binding domain OrfB_IS605 PF01385.19 gi|15921307|ref|NP_376976.1| - 1.8e-13 50.8 0.2 7.3e-13 48.8 0.0 2.1 2 1 0 2 2 2 1 Probable transposase C1_2 PF03107.16 gi|15921307|ref|NP_376976.1| - 0.013 15.8 0.2 0.024 15.0 0.2 1.4 1 0 0 1 1 1 0 C1 domain Amidohydro_2 PF04909.14 gi|15921308|ref|NP_376977.1| - 3e-27 96.2 0.3 4.4e-27 95.6 0.0 1.4 2 0 0 2 2 2 1 Amidohydrolase Amidohydro_1 PF01979.20 gi|15921308|ref|NP_376977.1| - 0.02 14.2 0.0 0.55 9.5 0.0 2.0 2 0 0 2 2 2 0 Amidohydrolase family PEPCK_GTP PF00821.18 gi|15921309|ref|NP_376978.1| - 1.8e-102 342.8 0.0 2.3e-102 342.5 0.0 1.1 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxykinase C-terminal P-loop domain PEPCK_N PF17297.2 gi|15921309|ref|NP_376978.1| - 1.5e-56 191.4 0.0 2.3e-56 190.8 0.0 1.3 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxykinase N-terminal domain Mistic PF11458.8 gi|15921309|ref|NP_376978.1| - 0.17 11.8 3.8 0.17 11.8 0.7 2.6 3 0 0 3 3 3 0 Membrane-integrating protein Mistic DUF4493 PF14900.6 gi|15921310|ref|NP_376979.1| - 0.0028 17.5 0.6 0.0039 17.1 0.6 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4493) DUF5001 PF16392.5 gi|15921310|ref|NP_376979.1| - 0.023 14.6 3.7 1.5 8.8 0.6 2.5 1 1 1 2 2 2 0 Ig-like domain PKD PF00801.20 gi|15921310|ref|NP_376979.1| - 0.078 12.8 0.6 0.43 10.5 0.2 2.2 2 0 0 2 2 2 0 PKD domain HTH_IclR PF09339.10 gi|15921311|ref|NP_376980.1| - 1.7e-10 40.5 0.0 2.6e-10 39.9 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|15921311|ref|NP_376980.1| - 9.4e-09 35.0 0.1 1.8e-08 34.1 0.1 1.5 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|15921311|ref|NP_376980.1| - 1.5e-08 34.4 0.3 2.2e-08 33.9 0.3 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|15921311|ref|NP_376980.1| - 4.2e-08 32.6 0.1 8.3e-08 31.7 0.1 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_20 PF12840.7 gi|15921311|ref|NP_376980.1| - 2.2e-07 30.8 0.0 3.9e-07 30.0 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|15921311|ref|NP_376980.1| - 2e-06 27.5 0.0 4e-06 26.6 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_27 PF13463.6 gi|15921311|ref|NP_376980.1| - 1.7e-05 25.2 0.1 3.6e-05 24.2 0.1 1.6 1 1 0 1 1 1 1 Winged helix DNA-binding domain AbiEi_4 PF13338.6 gi|15921311|ref|NP_376980.1| - 0.00065 19.8 0.1 0.0011 19.1 0.1 1.4 1 0 0 1 1 1 1 Transcriptional regulator, AbiEi antitoxin HTH_AsnC-type PF13404.6 gi|15921311|ref|NP_376980.1| - 0.0013 18.5 0.1 0.0025 17.6 0.1 1.5 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain HTH_36 PF13730.6 gi|15921311|ref|NP_376980.1| - 0.0085 16.0 0.1 0.015 15.2 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Rrf2 PF02082.20 gi|15921311|ref|NP_376980.1| - 0.014 15.8 0.1 0.026 14.9 0.1 1.4 1 0 0 1 1 1 0 Transcriptional regulator Replic_Relax PF13814.6 gi|15921311|ref|NP_376980.1| - 0.021 14.9 0.1 0.03 14.4 0.1 1.2 1 0 0 1 1 1 0 Replication-relaxation Sigma70_r4 PF04545.16 gi|15921311|ref|NP_376980.1| - 0.025 14.1 0.0 0.047 13.2 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 RNA_pol_Rpc34 PF05158.12 gi|15921311|ref|NP_376980.1| - 0.026 13.9 0.1 0.047 13.1 0.1 1.3 1 1 0 1 1 1 0 RNA polymerase Rpc34 subunit Chordopox_A13L PF05961.11 gi|15921311|ref|NP_376980.1| - 0.033 14.4 0.1 0.12 12.6 0.0 1.8 2 0 0 2 2 2 0 Chordopoxvirus A13L protein MarR PF01047.22 gi|15921311|ref|NP_376980.1| - 0.042 13.8 0.0 0.075 13.0 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_11 PF08279.12 gi|15921311|ref|NP_376980.1| - 0.044 13.7 0.1 0.084 12.8 0.1 1.5 1 0 0 1 1 1 0 HTH domain DprA_WH PF17782.1 gi|15921311|ref|NP_376980.1| - 0.048 13.8 0.0 0.069 13.3 0.0 1.2 1 0 0 1 1 1 0 DprA winged helix domain LexA_DNA_bind PF01726.16 gi|15921311|ref|NP_376980.1| - 0.11 12.3 0.1 0.22 11.3 0.1 1.7 1 1 0 1 1 1 0 LexA DNA binding domain ASFV_J13L PF05568.11 gi|15921311|ref|NP_376980.1| - 0.29 10.9 0.2 0.34 10.7 0.2 1.1 1 0 0 1 1 1 0 African swine fever virus J13L protein HtaA PF04213.13 gi|15921313|ref|NP_376982.1| - 0.052 14.0 2.9 2.8 8.4 0.0 2.0 1 1 1 2 2 2 0 Htaa Tir_receptor_C PF07489.11 gi|15921313|ref|NP_376982.1| - 0.12 12.3 3.5 0.23 11.4 3.5 1.4 1 0 0 1 1 1 0 Translocated intimin receptor (Tir) C-terminus Peptidase_M19 PF01244.21 gi|15921314|ref|NP_376983.1| - 2.2e-72 244.0 0.0 2.4e-72 243.8 0.0 1.0 1 0 0 1 1 1 1 Membrane dipeptidase (Peptidase family M19) IF2_N PF04760.15 gi|15921314|ref|NP_376983.1| - 0.12 12.2 2.3 1.5 8.7 0.0 3.1 3 0 0 3 3 3 0 Translation initiation factor IF-2, N-terminal region HTH_34 PF13601.6 gi|15921315|ref|NP_376984.1| - 6.4e-12 45.5 0.8 8.5e-12 45.1 0.2 1.5 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_20 PF12840.7 gi|15921315|ref|NP_376984.1| - 2e-10 40.6 0.0 8.7e-10 38.5 0.0 1.8 1 1 1 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|15921315|ref|NP_376984.1| - 4.2e-06 26.5 1.7 6e-06 26.0 0.2 1.9 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family MarR PF01047.22 gi|15921315|ref|NP_376984.1| - 6.6e-05 22.8 0.0 0.00013 21.8 0.0 1.5 1 0 0 1 1 1 1 MarR family HxlR PF01638.17 gi|15921315|ref|NP_376984.1| - 0.00095 19.0 0.1 0.0015 18.3 0.1 1.3 1 0 0 1 1 1 1 HxlR-like helix-turn-helix HTH_24 PF13412.6 gi|15921315|ref|NP_376984.1| - 0.00097 18.7 0.1 0.0038 16.7 0.0 1.9 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding DUF2513 PF10711.9 gi|15921315|ref|NP_376984.1| - 0.0025 18.1 0.1 0.0036 17.6 0.1 1.3 1 0 0 1 1 1 1 Hypothetical protein (DUF2513) HTH_45 PF14947.6 gi|15921315|ref|NP_376984.1| - 0.02 14.8 1.0 0.037 14.0 1.0 1.5 1 1 0 1 1 1 0 Winged helix-turn-helix Rrf2 PF02082.20 gi|15921315|ref|NP_376984.1| - 0.032 14.6 0.1 0.048 14.0 0.1 1.3 1 0 0 1 1 1 0 Transcriptional regulator HTH_IclR PF09339.10 gi|15921315|ref|NP_376984.1| - 0.034 13.9 0.0 0.063 13.1 0.0 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|15921315|ref|NP_376984.1| - 0.11 12.4 0.0 0.16 11.9 0.0 1.3 1 0 0 1 1 1 0 MarR family DUF4516 PF14990.6 gi|15921316|ref|NP_376985.1| - 0.16 11.7 2.0 0.44 10.3 2.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4516) FA_desaturase PF00487.24 gi|15921316|ref|NP_376985.1| - 5.2 6.8 8.4 1.9 8.2 5.7 1.6 1 1 0 1 1 1 0 Fatty acid desaturase ABC_tran PF00005.27 gi|15921317|ref|NP_376986.1| - 6.5e-17 62.3 0.0 1.1e-16 61.6 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|15921317|ref|NP_376986.1| - 5.6e-10 39.5 0.6 2e-07 31.1 0.5 2.2 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|15921317|ref|NP_376986.1| - 6.3e-08 32.3 0.2 0.00041 19.8 0.1 2.1 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|15921317|ref|NP_376986.1| - 8e-07 29.7 0.4 1.5e-06 28.9 0.3 1.3 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|15921317|ref|NP_376986.1| - 7.4e-06 25.6 0.0 1.5e-05 24.7 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 gi|15921317|ref|NP_376986.1| - 0.00028 20.7 0.0 0.00028 20.7 0.0 1.2 1 0 0 1 1 1 1 AAA ATPase domain AAA_27 PF13514.6 gi|15921317|ref|NP_376986.1| - 0.00092 18.9 0.1 0.0019 17.8 0.0 1.5 2 0 0 2 2 1 1 AAA domain AAA_16 PF13191.6 gi|15921317|ref|NP_376986.1| - 0.0016 18.8 0.0 0.0051 17.2 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain ATPase_2 PF01637.18 gi|15921317|ref|NP_376986.1| - 0.0021 18.0 0.2 0.0039 17.1 0.2 1.6 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea NTPase_1 PF03266.15 gi|15921317|ref|NP_376986.1| - 0.0021 18.0 0.0 0.014 15.3 0.0 2.0 2 0 0 2 2 2 1 NTPase NACHT PF05729.12 gi|15921317|ref|NP_376986.1| - 0.0027 17.6 0.1 0.0088 16.0 0.0 1.8 2 0 0 2 2 2 1 NACHT domain AAA_18 PF13238.6 gi|15921317|ref|NP_376986.1| - 0.0052 17.3 0.3 0.0079 16.7 0.3 1.6 1 1 0 1 1 1 1 AAA domain Mg_chelatase PF01078.21 gi|15921317|ref|NP_376986.1| - 0.0058 16.0 0.0 0.0092 15.4 0.0 1.3 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI Rad17 PF03215.15 gi|15921317|ref|NP_376986.1| - 0.0073 16.3 0.0 0.012 15.5 0.0 1.3 1 0 0 1 1 1 1 Rad17 P-loop domain T2SSE PF00437.20 gi|15921317|ref|NP_376986.1| - 0.0095 15.0 0.0 0.015 14.4 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_5 PF07728.14 gi|15921317|ref|NP_376986.1| - 0.011 15.7 0.1 0.021 14.8 0.1 1.6 1 1 0 1 1 1 0 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|15921317|ref|NP_376986.1| - 0.013 15.9 0.0 0.027 14.9 0.0 1.6 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 gi|15921317|ref|NP_376986.1| - 0.015 15.5 0.1 0.043 14.1 0.0 1.8 2 0 0 2 2 2 0 AAA domain PduV-EutP PF10662.9 gi|15921317|ref|NP_376986.1| - 0.025 14.3 0.0 0.043 13.6 0.0 1.3 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation AAA_33 PF13671.6 gi|15921317|ref|NP_376986.1| - 0.028 14.6 0.0 0.052 13.7 0.0 1.6 1 1 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|15921317|ref|NP_376986.1| - 0.038 13.9 0.1 0.083 12.8 0.1 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_30 PF13604.6 gi|15921317|ref|NP_376986.1| - 0.039 13.7 0.0 0.054 13.2 0.0 1.3 1 0 0 1 1 1 0 AAA domain SbcCD_C PF13558.6 gi|15921317|ref|NP_376986.1| - 0.042 14.1 0.0 0.31 11.3 0.0 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit AAA_22 PF13401.6 gi|15921317|ref|NP_376986.1| - 0.056 13.7 0.1 0.14 12.4 0.1 1.8 1 1 0 1 1 1 0 AAA domain DUF3584 PF12128.8 gi|15921317|ref|NP_376986.1| - 0.058 10.9 0.3 0.087 10.3 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) cobW PF02492.19 gi|15921317|ref|NP_376986.1| - 0.063 12.9 0.2 0.14 11.7 0.1 1.6 2 0 0 2 2 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_24 PF13479.6 gi|15921317|ref|NP_376986.1| - 0.066 12.9 0.0 0.1 12.3 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_19 PF13245.6 gi|15921317|ref|NP_376986.1| - 0.067 13.5 0.0 0.14 12.4 0.0 1.5 1 0 0 1 1 1 0 AAA domain AAA_13 PF13166.6 gi|15921317|ref|NP_376986.1| - 0.069 11.8 0.1 0.12 11.0 0.1 1.4 1 0 0 1 1 1 0 AAA domain G-alpha PF00503.20 gi|15921317|ref|NP_376986.1| - 0.081 12.1 0.0 0.082 12.0 0.0 1.2 1 0 0 1 1 1 0 G-protein alpha subunit IstB_IS21 PF01695.17 gi|15921317|ref|NP_376986.1| - 0.11 12.3 0.0 1.1 9.0 0.0 2.1 2 0 0 2 2 2 0 IstB-like ATP binding protein Roc PF08477.13 gi|15921317|ref|NP_376986.1| - 0.16 12.2 0.1 0.3 11.3 0.1 1.5 1 0 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase FtsK_SpoIIIE PF01580.18 gi|15921317|ref|NP_376986.1| - 0.18 11.1 0.0 0.33 10.3 0.0 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family Adeno_IVa2 PF02456.15 gi|15921317|ref|NP_376986.1| - 0.19 10.5 0.1 0.3 9.8 0.1 1.2 1 0 0 1 1 1 0 Adenovirus IVa2 protein Zn_dep_PLPC PF00882.18 gi|15921318|ref|NP_376987.1| - 0.075 13.0 0.0 0.12 12.3 0.0 1.3 1 0 0 1 1 1 0 Zinc dependent phospholipase C DUF615 PF04751.14 gi|15921321|ref|NP_376990.1| - 0.0039 17.2 1.3 0.0049 16.9 1.3 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF615) DUF3139 PF11337.8 gi|15921323|ref|NP_376992.1| - 0.017 15.8 3.8 0.017 15.8 3.8 2.7 2 1 0 2 2 2 0 Protein of unknown function (DUF3139) OppC_N PF12911.7 gi|15921323|ref|NP_376992.1| - 0.021 14.8 1.1 0.074 13.0 1.1 1.9 1 0 0 1 1 1 0 N-terminal TM domain of oligopeptide transport permease C Piezo_RRas_bdg PF12166.8 gi|15921323|ref|NP_376992.1| - 0.11 11.8 4.6 0.21 10.9 0.9 2.1 2 0 0 2 2 2 0 Piezo non-specific cation channel, R-Ras-binding domain DUF3139 PF11337.8 gi|15921324|ref|NP_376993.1| - 0.0034 18.0 1.0 0.014 16.0 1.0 2.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3139) MacB_PCD PF12704.7 gi|15921326|ref|NP_376995.1| - 0.062 13.6 0.6 0.12 12.7 0.6 1.6 1 0 0 1 1 1 0 MacB-like periplasmic core domain Pyr_redox_2 PF07992.14 gi|15921327|ref|NP_376996.1| - 4.1e-57 193.6 1.5 6.4e-57 193.0 1.5 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|15921327|ref|NP_376996.1| - 8.6e-28 96.8 0.2 1.5e-27 96.1 0.2 1.4 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox_3 PF13738.6 gi|15921327|ref|NP_376996.1| - 2.2e-14 53.4 0.1 2.2e-14 53.4 0.1 2.3 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|15921327|ref|NP_376996.1| - 2.3e-11 44.1 0.2 2.3e-11 44.1 0.2 3.0 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|15921327|ref|NP_376996.1| - 0.00024 20.3 9.7 0.099 11.7 0.4 3.9 4 0 0 4 4 4 3 Glucose inhibited division protein A HI0933_like PF03486.14 gi|15921327|ref|NP_376996.1| - 0.004 15.9 1.5 0.29 9.8 0.0 3.1 3 0 0 3 3 3 1 HI0933-like protein Baculo_E56 PF04639.12 gi|15921327|ref|NP_376996.1| - 0.032 13.5 0.0 0.054 12.8 0.0 1.3 1 0 0 1 1 1 0 Baculoviral E56 protein, specific to ODV envelope FAD_binding_2 PF00890.24 gi|15921327|ref|NP_376996.1| - 0.37 9.8 3.4 3.3 6.7 0.0 2.3 2 0 0 2 2 2 0 FAD binding domain HTH_5 PF01022.20 gi|15921328|ref|NP_376997.1| - 9e-17 60.7 2.3 1.5e-16 60.0 2.3 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|15921328|ref|NP_376997.1| - 3.2e-08 33.5 0.1 4.6e-08 33.0 0.1 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|15921328|ref|NP_376997.1| - 6.3e-08 32.4 0.0 9.8e-08 31.8 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_34 PF13601.6 gi|15921328|ref|NP_376997.1| - 0.00019 21.5 0.2 0.00031 20.9 0.2 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_24 PF13412.6 gi|15921328|ref|NP_376997.1| - 0.00038 20.0 0.6 0.0007 19.1 0.6 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_9 PF08221.11 gi|15921328|ref|NP_376997.1| - 0.001 19.1 0.7 0.0024 17.9 0.5 1.7 1 1 0 1 1 1 1 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_38 PF13936.6 gi|15921328|ref|NP_376997.1| - 0.0019 17.9 0.3 0.0064 16.2 0.1 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain TFIIE_alpha PF02002.17 gi|15921328|ref|NP_376997.1| - 0.0069 16.2 0.4 0.011 15.6 0.4 1.6 1 1 0 1 1 1 1 TFIIE alpha subunit Rrf2 PF02082.20 gi|15921328|ref|NP_376997.1| - 0.0088 16.4 0.1 0.013 15.8 0.1 1.4 1 0 0 1 1 1 1 Transcriptional regulator DUF4423 PF14394.6 gi|15921328|ref|NP_376997.1| - 0.035 13.8 0.1 0.046 13.4 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_23 PF13384.6 gi|15921328|ref|NP_376997.1| - 0.052 13.3 0.0 0.13 12.0 0.0 1.7 2 0 0 2 2 2 0 Homeodomain-like domain Sigma70_r4 PF04545.16 gi|15921328|ref|NP_376997.1| - 0.053 13.1 0.0 0.12 11.9 0.0 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_11 PF08279.12 gi|15921328|ref|NP_376997.1| - 0.081 12.9 0.2 0.14 12.2 0.2 1.4 1 0 0 1 1 1 0 HTH domain MarR_2 PF12802.7 gi|15921328|ref|NP_376997.1| - 0.09 12.7 0.0 0.15 11.9 0.0 1.4 1 0 0 1 1 1 0 MarR family zinc_ribbon_2 PF13240.6 gi|15921330|ref|NP_376999.1| - 2.2e-18 65.3 14.8 6.8e-10 38.3 1.4 2.3 2 0 0 2 2 2 2 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|15921330|ref|NP_376999.1| - 3.5e-14 51.6 13.0 3.9e-08 32.4 1.7 2.3 2 0 0 2 2 2 2 zinc-ribbon domain DZR PF12773.7 gi|15921330|ref|NP_376999.1| - 6.3e-13 48.5 12.1 1.1e-12 47.7 12.1 1.4 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_15 PF17032.5 gi|15921330|ref|NP_376999.1| - 1.8e-07 31.8 9.7 1.7e-05 25.4 0.9 2.3 2 0 0 2 2 2 2 zinc-ribbon family UPF0547 PF10571.9 gi|15921330|ref|NP_376999.1| - 5.9e-06 26.3 15.1 0.0016 18.4 1.6 3.3 2 1 1 3 3 3 3 Uncharacterised protein family UPF0547 OrfB_Zn_ribbon PF07282.11 gi|15921330|ref|NP_376999.1| - 0.016 15.1 9.5 1.4 8.9 3.6 3.1 1 1 0 2 2 2 0 Putative transposase DNA-binding domain PolC_DP2 PF03833.13 gi|15921330|ref|NP_376999.1| - 0.043 11.7 5.6 0.053 11.4 5.6 1.1 1 0 0 1 1 1 0 DNA polymerase II large subunit DP2 Nudix_N_2 PF14803.6 gi|15921330|ref|NP_376999.1| - 0.056 13.4 13.2 1.1 9.3 0.4 4.0 3 1 0 3 3 3 0 Nudix N-terminal HypA PF01155.19 gi|15921330|ref|NP_376999.1| - 0.26 11.3 11.1 4.3 7.4 6.8 2.3 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zf-HIT PF04438.16 gi|15921330|ref|NP_376999.1| - 0.53 10.2 10.8 2.2 8.2 4.0 3.1 3 0 0 3 3 3 0 HIT zinc finger zf-tcix PF14952.6 gi|15921330|ref|NP_376999.1| - 0.54 9.9 13.9 0.037 13.6 3.6 2.9 3 0 0 3 3 3 0 Putative treble-clef, zinc-finger, Zn-binding zf-NADH-PPase PF09297.11 gi|15921330|ref|NP_376999.1| - 0.81 9.4 12.1 5.6 6.7 3.8 3.5 3 1 0 3 3 3 0 NADH pyrophosphatase zinc ribbon domain Cript PF10235.9 gi|15921330|ref|NP_376999.1| - 1.8 9.2 12.0 3.6 8.2 2.6 2.5 1 1 1 2 2 2 0 Microtubule-associated protein CRIPT HscB_4_cys PF18256.1 gi|15921330|ref|NP_376999.1| - 2 8.3 16.6 0.042 13.7 4.3 3.0 2 1 1 3 3 3 0 Co-chaperone HscB tetracysteine metal binding motif zf-CHY PF05495.12 gi|15921330|ref|NP_376999.1| - 2.5 8.6 10.7 1.5 9.3 5.3 2.3 1 1 1 2 2 2 0 CHY zinc finger DHHC PF01529.20 gi|15921330|ref|NP_376999.1| - 2.6 8.2 5.8 4.2 7.5 0.6 2.4 1 1 1 2 2 2 0 DHHC palmitoyltransferase PknG_rubred PF16919.5 gi|15921330|ref|NP_376999.1| - 5.4 7.2 7.8 13 6.0 3.6 2.5 1 1 1 2 2 2 0 Protein kinase G rubredoxin domain zf-C6H2 PF15801.5 gi|15921330|ref|NP_376999.1| - 7.6 6.9 9.7 9.5 6.6 5.6 2.3 1 1 1 2 2 2 0 zf-MYND-like zinc finger, mRNA-binding zinc_ribbon_5 PF13719.6 gi|15921330|ref|NP_376999.1| - 8.2 6.3 7.3 17 5.3 0.6 2.8 2 1 1 3 3 3 0 zinc-ribbon domain zf-C2HC5 PF06221.13 gi|15921330|ref|NP_376999.1| - 9.4 6.3 8.4 15 5.7 0.6 2.5 1 1 1 2 2 2 0 Putative zinc finger motif, C2HC5-type E1_UFD PF09358.10 gi|15921331|ref|NP_377000.1| - 0.0033 18.1 1.6 0.0042 17.7 1.6 1.2 1 0 0 1 1 1 1 Ubiquitin fold domain PqqD PF05402.12 gi|15921331|ref|NP_377000.1| - 0.0087 16.3 0.3 0.19 12.1 0.0 2.2 2 0 0 2 2 2 1 Coenzyme PQQ synthesis protein D (PqqD) Penicillinase_R PF03965.16 gi|15921331|ref|NP_377000.1| - 0.031 14.6 0.2 0.039 14.3 0.2 1.2 1 0 0 1 1 1 0 Penicillinase repressor IMD PF08397.11 gi|15921331|ref|NP_377000.1| - 0.038 13.4 2.8 0.047 13.1 2.8 1.2 1 0 0 1 1 1 0 IRSp53/MIM homology domain EF1G PF00647.19 gi|15921331|ref|NP_377000.1| - 0.043 13.9 0.5 0.1 12.6 0.3 1.7 1 1 1 2 2 2 0 Elongation factor 1 gamma, conserved domain PH_12 PF16457.5 gi|15921331|ref|NP_377000.1| - 0.092 13.3 1.4 0.11 13.0 1.4 1.2 1 0 0 1 1 1 0 Pleckstrin homology domain YbjQ_1 PF01906.17 gi|15921333|ref|NP_377002.1| - 2.7e-37 127.6 3.4 3e-37 127.4 3.4 1.0 1 0 0 1 1 1 1 Putative heavy-metal-binding SeleniumBinding PF11524.8 gi|15921333|ref|NP_377002.1| - 0.00083 19.7 0.4 1.2 9.6 0.1 2.2 2 0 0 2 2 2 2 Selenium binding protein AP_endonuc_2 PF01261.24 gi|15921333|ref|NP_377002.1| - 0.096 12.1 0.0 0.11 11.9 0.0 1.4 1 0 0 1 1 1 0 Xylose isomerase-like TIM barrel DUF2341 PF10102.9 gi|15921333|ref|NP_377002.1| - 0.2 12.3 0.0 0.26 11.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2341) MFS_1 PF07690.16 gi|15921334|ref|NP_377003.1| - 7.1e-09 35.0 12.7 7.1e-09 35.0 12.7 1.4 1 1 0 1 1 1 1 Major Facilitator Superfamily HTH_23 PF13384.6 gi|15921335|ref|NP_377004.1| - 4.1e-08 32.8 0.1 8.3e-08 31.8 0.1 1.6 1 0 0 1 1 1 1 Homeodomain-like domain Zn_Tnp_IS1 PF03811.13 gi|15921335|ref|NP_377004.1| - 1.9e-05 24.3 6.2 4.5e-05 23.1 6.2 1.6 1 0 0 1 1 1 1 InsA N-terminal domain HTH_28 PF13518.6 gi|15921335|ref|NP_377004.1| - 2.5e-05 24.3 0.0 6.2e-05 23.0 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain Terminase_5 PF06056.12 gi|15921335|ref|NP_377004.1| - 3.8e-05 23.5 0.1 8.6e-05 22.4 0.1 1.6 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) Sigma70_r4_2 PF08281.12 gi|15921335|ref|NP_377004.1| - 0.00022 20.9 0.0 0.00041 20.0 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_38 PF13936.6 gi|15921335|ref|NP_377004.1| - 0.00027 20.6 0.0 0.00065 19.4 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 gi|15921335|ref|NP_377004.1| - 0.0017 17.8 0.0 0.0039 16.6 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 zf-ribbon_3 PF13248.6 gi|15921335|ref|NP_377004.1| - 0.0019 17.6 1.7 1.3 8.6 0.1 2.3 2 0 0 2 2 2 2 zinc-ribbon domain HTH_Tnp_1 PF01527.20 gi|15921335|ref|NP_377004.1| - 0.0048 17.2 0.1 0.012 16.0 0.1 1.6 1 0 0 1 1 1 1 Transposase HTH_Tnp_IS630 PF01710.16 gi|15921335|ref|NP_377004.1| - 0.0068 16.4 0.1 0.018 15.1 0.1 1.7 1 0 0 1 1 1 1 Transposase HTH_29 PF13551.6 gi|15921335|ref|NP_377004.1| - 0.0094 15.9 0.0 0.017 15.1 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn helix Zn_Tnp_IS1595 PF12760.7 gi|15921335|ref|NP_377004.1| - 0.022 14.7 4.8 0.039 13.9 4.8 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain HTH_40 PF14493.6 gi|15921335|ref|NP_377004.1| - 0.031 14.7 0.0 0.066 13.7 0.0 1.6 2 0 0 2 2 1 0 Helix-turn-helix domain OrfB_Zn_ribbon PF07282.11 gi|15921335|ref|NP_377004.1| - 0.04 13.8 1.4 0.11 12.4 1.4 1.7 1 0 0 1 1 1 0 Putative transposase DNA-binding domain DUF1804 PF08822.11 gi|15921335|ref|NP_377004.1| - 0.051 13.6 0.2 0.3 11.0 0.2 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1804) HTH_Tnp_IS1 PF12759.7 gi|15921335|ref|NP_377004.1| - 0.078 12.6 0.0 0.13 11.9 0.0 1.3 1 0 0 1 1 1 0 InsA C-terminal domain GerE PF00196.19 gi|15921335|ref|NP_377004.1| - 0.1 12.1 0.0 0.2 11.2 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family Lar_restr_allev PF14354.6 gi|15921335|ref|NP_377004.1| - 0.36 11.3 4.0 0.23 11.9 0.9 2.1 2 0 0 2 2 2 0 Restriction alleviation protein Lar Zn-ribbon_8 PF09723.10 gi|15921335|ref|NP_377004.1| - 0.36 11.0 4.7 2.2 8.5 0.6 2.5 2 0 0 2 2 2 0 Zinc ribbon domain Nudix_N_2 PF14803.6 gi|15921335|ref|NP_377004.1| - 0.81 9.7 5.3 1.8 8.6 5.3 1.6 1 0 0 1 1 1 0 Nudix N-terminal DUF4145 PF13643.6 gi|15921336|ref|NP_377005.1| - 0.011 15.8 0.0 0.028 14.6 0.0 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF4145) Toxin_5 PF05294.13 gi|15921336|ref|NP_377005.1| - 0.041 14.3 1.6 0.21 12.0 0.1 2.1 2 0 0 2 2 2 0 Scorpion short toxin DrsE PF02635.15 gi|15921337|ref|NP_377006.1| - 6.6e-06 26.5 0.0 7.7e-06 26.3 0.0 1.2 1 0 0 1 1 1 1 DsrE/DsrF-like family HEPN PF05168.14 gi|15921338|ref|NP_377007.1| - 5e-25 87.9 0.1 5.4e-25 87.8 0.1 1.0 1 0 0 1 1 1 1 HEPN domain NTP_transf_2 PF01909.23 gi|15921339|ref|NP_377008.1| - 1.3e-11 44.7 0.6 1.7e-11 44.2 0.6 1.3 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|15921339|ref|NP_377008.1| - 1.1e-06 28.6 0.1 2.2e-06 27.7 0.1 1.7 1 1 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase NTF-like PF14540.6 gi|15921339|ref|NP_377008.1| - 0.017 14.9 0.1 0.029 14.1 0.1 1.4 1 1 0 1 1 1 0 Nucleotidyltransferase-like Sushi PF00084.20 gi|15921339|ref|NP_377008.1| - 0.061 13.9 0.1 0.13 12.9 0.1 1.5 1 0 0 1 1 1 0 Sushi repeat (SCR repeat) DUF294 PF03445.13 gi|15921339|ref|NP_377008.1| - 0.092 12.6 0.0 0.11 12.2 0.0 1.3 1 0 0 1 1 1 0 Putative nucleotidyltransferase DUF294 EamA PF00892.20 gi|15921340|ref|NP_377009.1| - 1.8e-34 118.8 34.2 1.2e-20 74.0 11.3 2.4 2 1 0 2 2 2 2 EamA-like transporter family Fib_alpha PF08702.10 gi|15921342|ref|NP_377011.1| - 4.2e-10 40.0 30.6 0.0049 17.1 5.2 4.4 1 1 3 4 4 4 4 Fibrinogen alpha/beta chain family DUF16 PF01519.16 gi|15921342|ref|NP_377011.1| - 4.3e-10 40.0 40.5 0.00033 21.1 5.3 4.5 2 1 2 4 4 3 3 Protein of unknown function DUF16 DUF2383 PF09537.10 gi|15921342|ref|NP_377011.1| - 3.4e-08 33.8 18.5 0.043 14.2 0.5 4.6 1 1 3 4 4 4 3 Domain of unknown function (DUF2383) AAA_13 PF13166.6 gi|15921342|ref|NP_377011.1| - 1.1e-07 31.0 28.1 2.5e-07 29.8 28.1 1.5 1 1 0 1 1 1 1 AAA domain Spc29 PF17082.5 gi|15921342|ref|NP_377011.1| - 2.4e-07 30.9 22.8 0.048 13.5 0.5 4.0 1 1 3 4 4 4 4 Spindle Pole Component 29 DUF3972 PF13118.6 gi|15921342|ref|NP_377011.1| - 3.9e-07 30.5 25.5 0.00093 19.6 1.7 4.3 1 1 2 3 3 3 2 Protein of unknown function (DUF3972) TMF_DNA_bd PF12329.8 gi|15921342|ref|NP_377011.1| - 3.7e-06 26.8 36.5 0.017 15.1 4.9 3.8 1 1 2 3 3 3 3 TATA element modulatory factor 1 DNA binding Fusion_gly PF00523.18 gi|15921342|ref|NP_377011.1| - 3.7e-06 25.5 23.6 0.049 11.9 3.0 3.6 1 1 4 5 5 5 5 Fusion glycoprotein F0 Collagen_mid PF15984.5 gi|15921342|ref|NP_377011.1| - 4.2e-06 26.7 5.0 0.0092 15.7 6.2 2.3 1 1 1 2 2 2 1 Bacterial collagen, middle region ATG16 PF08614.11 gi|15921342|ref|NP_377011.1| - 7.5e-06 26.3 32.6 0.0031 17.8 13.0 3.1 1 1 2 3 3 3 3 Autophagy protein 16 (ATG16) SlyX PF04102.12 gi|15921342|ref|NP_377011.1| - 1e-05 26.0 35.0 0.059 14.0 0.7 4.6 1 1 4 5 5 5 2 SlyX ApoLp-III PF07464.11 gi|15921342|ref|NP_377011.1| - 1.4e-05 25.3 28.8 0.0016 18.5 6.8 2.3 1 1 1 2 2 2 2 Apolipophorin-III precursor (apoLp-III) DUF948 PF06103.11 gi|15921342|ref|NP_377011.1| - 1.4e-05 25.3 19.8 0.012 15.9 6.4 3.3 1 1 2 3 3 3 2 Bacterial protein of unknown function (DUF948) HMMR_N PF15905.5 gi|15921342|ref|NP_377011.1| - 3.3e-05 23.5 31.8 0.0025 17.4 14.2 2.6 1 1 1 2 2 2 2 Hyaluronan mediated motility receptor N-terminal Lebercilin PF15619.6 gi|15921342|ref|NP_377011.1| - 5.4e-05 22.9 28.2 0.00033 20.4 22.2 2.2 1 1 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease BLOC1_2 PF10046.9 gi|15921342|ref|NP_377011.1| - 6.9e-05 23.1 29.4 0.046 14.0 11.8 3.4 1 1 2 3 3 3 2 Biogenesis of lysosome-related organelles complex-1 subunit 2 ATG_C PF09333.11 gi|15921342|ref|NP_377011.1| - 7.6e-05 23.0 14.8 0.079 13.3 1.7 3.7 1 1 2 3 3 3 2 Autophagy-related protein C terminal domain HsbA PF12296.8 gi|15921342|ref|NP_377011.1| - 9e-05 22.9 20.5 0.0021 18.5 11.9 2.5 1 1 1 2 2 2 1 Hydrophobic surface binding protein A UPF0242 PF06785.11 gi|15921342|ref|NP_377011.1| - 0.00011 22.4 32.9 0.082 13.0 29.0 2.8 1 1 1 2 2 2 2 Uncharacterised protein family (UPF0242) N-terminus Arfaptin PF06456.13 gi|15921342|ref|NP_377011.1| - 0.00012 21.7 6.4 0.00012 21.7 6.4 2.2 1 1 1 2 2 2 1 Arfaptin-like domain HBM PF16591.5 gi|15921342|ref|NP_377011.1| - 0.00014 21.4 26.3 0.0005 19.6 26.3 2.1 1 1 0 1 1 1 1 Helical bimodular sensor domain DUF1664 PF07889.12 gi|15921342|ref|NP_377011.1| - 0.00014 21.9 26.3 0.019 15.0 12.0 3.2 1 1 2 3 3 3 1 Protein of unknown function (DUF1664) Filament PF00038.21 gi|15921342|ref|NP_377011.1| - 0.00027 20.6 30.0 0.2 11.2 14.2 3.1 1 1 2 3 3 3 1 Intermediate filament protein Myosin_tail_1 PF01576.19 gi|15921342|ref|NP_377011.1| - 0.00031 18.7 24.6 0.00052 18.0 24.6 1.3 1 0 0 1 1 1 1 Myosin tail EzrA PF06160.12 gi|15921342|ref|NP_377011.1| - 0.00042 18.6 25.6 0.0081 14.4 16.6 2.1 1 1 1 2 2 2 2 Septation ring formation regulator, EzrA YkyA PF10368.9 gi|15921342|ref|NP_377011.1| - 0.00051 19.8 31.2 0.0019 17.9 18.3 2.4 1 1 1 2 2 2 1 Putative cell-wall binding lipoprotein DUF2959 PF11172.8 gi|15921342|ref|NP_377011.1| - 0.00099 19.3 20.3 0.068 13.3 5.3 3.2 1 1 2 3 3 3 2 Protein of unknown function (DUF2959) BAR_3 PF16746.5 gi|15921342|ref|NP_377011.1| - 0.0011 18.8 20.1 0.022 14.4 11.4 2.3 1 1 1 2 2 2 2 BAR domain of APPL family Spc7 PF08317.11 gi|15921342|ref|NP_377011.1| - 0.0011 17.9 34.7 0.0041 16.0 24.5 2.2 1 1 2 3 3 3 3 Spc7 kinetochore protein DUF1759 PF03564.15 gi|15921342|ref|NP_377011.1| - 0.0014 18.6 9.8 0.02 14.8 1.0 2.9 1 1 1 2 2 2 1 Protein of unknown function (DUF1759) HOOK PF05622.12 gi|15921342|ref|NP_377011.1| - 0.0015 16.8 28.7 0.0081 14.4 28.6 1.8 1 1 0 1 1 1 1 HOOK protein BRE1 PF08647.11 gi|15921342|ref|NP_377011.1| - 0.0016 18.5 31.5 0.018 15.1 16.2 3.5 1 1 2 3 3 3 2 BRE1 E3 ubiquitin ligase DUF812 PF05667.11 gi|15921342|ref|NP_377011.1| - 0.0017 17.4 31.5 0.0037 16.2 31.4 1.6 1 1 0 1 1 1 1 Protein of unknown function (DUF812) ING PF12998.7 gi|15921342|ref|NP_377011.1| - 0.002 18.7 19.5 0.029 14.9 11.4 3.0 1 1 2 3 3 3 1 Inhibitor of growth proteins N-terminal histone-binding DUF3584 PF12128.8 gi|15921342|ref|NP_377011.1| - 0.0022 15.6 23.2 0.003 15.2 23.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF3584) ADIP PF11559.8 gi|15921342|ref|NP_377011.1| - 0.0022 18.1 31.1 0.44 10.6 14.9 2.7 1 1 2 3 3 3 2 Afadin- and alpha -actinin-Binding DUF3782 PF12644.7 gi|15921342|ref|NP_377011.1| - 0.0023 18.1 22.5 0.01 16.0 2.7 5.0 1 1 4 5 5 5 1 Protein of unknown function (DUF3782) ERM PF00769.19 gi|15921342|ref|NP_377011.1| - 0.0028 17.5 31.9 0.017 15.0 18.1 2.2 1 1 1 2 2 2 1 Ezrin/radixin/moesin family DUF4795 PF16043.5 gi|15921342|ref|NP_377011.1| - 0.0033 17.1 29.5 0.0087 15.7 29.5 1.9 1 1 0 1 1 1 1 Domain of unknown function (DUF4795) WEMBL PF05701.11 gi|15921342|ref|NP_377011.1| - 0.0036 16.1 31.0 0.058 12.1 12.8 2.0 1 1 1 2 2 2 1 Weak chloroplast movement under blue light Atg14 PF10186.9 gi|15921342|ref|NP_377011.1| - 0.0037 16.4 17.5 0.0037 16.4 17.5 2.5 1 1 1 2 2 2 1 Vacuolar sorting 38 and autophagy-related subunit 14 ANAPC5 PF12862.7 gi|15921342|ref|NP_377011.1| - 0.0038 17.3 15.5 3 8.0 0.8 5.5 1 1 3 6 6 5 0 Anaphase-promoting complex subunit 5 COG5 PF10392.9 gi|15921342|ref|NP_377011.1| - 0.0042 17.3 21.3 0.022 15.0 13.9 2.7 1 1 1 2 2 2 1 Golgi transport complex subunit 5 CorA PF01544.18 gi|15921342|ref|NP_377011.1| - 0.0043 16.4 12.9 0.0043 16.4 12.9 2.0 1 1 1 2 2 2 1 CorA-like Mg2+ transporter protein Tropomyosin_1 PF12718.7 gi|15921342|ref|NP_377011.1| - 0.0043 17.2 32.3 0.047 13.8 17.7 2.9 1 1 0 2 2 2 1 Tropomyosin like BORCS8 PF10167.9 gi|15921342|ref|NP_377011.1| - 0.0045 16.9 19.7 0.14 12.1 8.1 3.1 1 1 2 3 3 3 2 BLOC-1-related complex sub-unit 8 TEX13 PF15186.6 gi|15921342|ref|NP_377011.1| - 0.0046 16.6 28.7 0.11 12.2 4.2 4.1 1 1 3 4 4 4 2 Testis-expressed sequence 13 protein family TPR_1 PF00515.28 gi|15921342|ref|NP_377011.1| - 0.0054 16.5 15.8 3.5 7.6 0.2 6.9 5 2 2 7 7 6 0 Tetratricopeptide repeat HrpB7 PF09486.10 gi|15921342|ref|NP_377011.1| - 0.0061 17.0 31.0 0.34 11.3 6.9 3.2 1 1 2 3 3 3 2 Bacterial type III secretion protein (HrpB7) SCO1-SenC PF02630.14 gi|15921342|ref|NP_377011.1| - 0.0071 16.3 4.6 0.84 9.6 0.6 2.5 1 1 1 2 2 2 1 SCO1/SenC FlgN PF05130.12 gi|15921342|ref|NP_377011.1| - 0.0072 16.8 35.3 0.043 14.3 25.5 3.0 1 1 2 3 3 3 2 FlgN protein FliJ PF02050.16 gi|15921342|ref|NP_377011.1| - 0.0072 16.5 35.6 1.2 9.4 17.7 3.2 1 1 2 3 3 3 0 Flagellar FliJ protein DUF4988 PF16378.5 gi|15921342|ref|NP_377011.1| - 0.0079 15.9 15.7 0.19 11.3 1.1 3.9 1 1 2 3 3 3 1 Domain of unknown function TMPIT PF07851.13 gi|15921342|ref|NP_377011.1| - 0.0089 15.3 25.7 0.22 10.7 10.4 2.2 1 1 1 2 2 2 2 TMPIT-like protein Fez1 PF06818.15 gi|15921342|ref|NP_377011.1| - 0.0093 16.4 25.5 0.014 15.9 14.7 2.3 1 1 1 2 2 2 1 Fez1 Vps5 PF09325.10 gi|15921342|ref|NP_377011.1| - 0.01 15.4 19.0 0.015 14.9 19.0 1.2 1 0 0 1 1 1 0 Vps5 C terminal like GAS PF13851.6 gi|15921342|ref|NP_377011.1| - 0.011 15.1 30.8 0.029 13.7 30.6 1.8 1 1 0 1 1 1 0 Growth-arrest specific micro-tubule binding Spectrin PF00435.21 gi|15921342|ref|NP_377011.1| - 0.011 16.2 28.3 0.35 11.4 13.9 2.9 1 1 1 2 2 2 0 Spectrin repeat Bacillus_HBL PF05791.11 gi|15921342|ref|NP_377011.1| - 0.013 15.4 28.2 0.15 11.8 12.7 2.9 1 1 2 3 3 3 0 Bacillus haemolytic enterotoxin (HBL) APG17 PF04108.12 gi|15921342|ref|NP_377011.1| - 0.013 14.6 25.3 0.24 10.5 12.1 2.1 1 1 1 2 2 2 0 Autophagy protein Apg17 MCPsignal PF00015.21 gi|15921342|ref|NP_377011.1| - 0.014 15.2 27.5 0.49 10.2 9.6 2.2 1 1 1 2 2 2 0 Methyl-accepting chemotaxis protein (MCP) signalling domain Prominin PF05478.11 gi|15921342|ref|NP_377011.1| - 0.018 13.1 22.1 0.096 10.6 12.9 2.0 1 1 1 2 2 2 0 Prominin Taxilin PF09728.9 gi|15921342|ref|NP_377011.1| - 0.018 14.2 25.3 0.078 12.1 25.3 1.8 1 1 0 1 1 1 0 Myosin-like coiled-coil protein ZapB PF06005.12 gi|15921342|ref|NP_377011.1| - 0.018 15.5 34.0 0.73 10.3 12.2 4.1 1 1 3 4 4 4 0 Cell division protein ZapB DUF4200 PF13863.6 gi|15921342|ref|NP_377011.1| - 0.018 15.4 33.8 0.21 12.0 10.9 3.5 1 1 2 3 3 3 0 Domain of unknown function (DUF4200) PHM7_cyt PF14703.6 gi|15921342|ref|NP_377011.1| - 0.02 15.2 16.0 1.5 9.0 15.8 3.1 1 1 0 1 1 1 0 Cytosolic domain of 10TM putative phosphate transporter NPV_P10 PF05531.12 gi|15921342|ref|NP_377011.1| - 0.021 15.3 30.7 0.24 11.9 7.4 4.7 1 1 4 5 5 5 0 Nucleopolyhedrovirus P10 protein PDDEXK_10 PF07788.11 gi|15921342|ref|NP_377011.1| - 0.029 14.3 1.9 0.069 13.1 1.9 1.7 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily DUF4094 PF13334.6 gi|15921342|ref|NP_377011.1| - 0.029 14.8 24.7 3.6 8.1 3.0 4.8 1 1 2 3 3 3 0 Domain of unknown function (DUF4094) Cast PF10174.9 gi|15921342|ref|NP_377011.1| - 0.03 12.6 28.9 0.066 11.4 25.0 2.0 1 1 1 2 2 2 0 RIM-binding protein of the cytomatrix active zone MAD PF05557.13 gi|15921342|ref|NP_377011.1| - 0.031 12.6 26.1 0.047 12.1 26.1 1.2 1 0 0 1 1 1 0 Mitotic checkpoint protein HEAT_PBS PF03130.16 gi|15921342|ref|NP_377011.1| - 0.033 14.8 13.1 19 6.3 0.0 5.9 4 3 0 4 4 4 0 PBS lyase HEAT-like repeat Exonuc_VII_L PF02601.15 gi|15921342|ref|NP_377011.1| - 0.033 13.7 22.2 0.034 13.7 9.9 2.1 1 1 1 2 2 2 0 Exonuclease VII, large subunit LXG PF04740.12 gi|15921342|ref|NP_377011.1| - 0.036 13.8 26.7 0.35 10.6 5.7 3.6 1 1 2 3 3 3 0 LXG domain of WXG superfamily DUF677 PF05055.12 gi|15921342|ref|NP_377011.1| - 0.036 13.0 22.2 0.075 11.9 9.8 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF677) Corona_S2 PF01601.16 gi|15921342|ref|NP_377011.1| - 0.038 12.5 19.9 0.035 12.6 1.7 2.9 1 1 2 3 3 3 0 Coronavirus S2 glycoprotein DUF848 PF05852.11 gi|15921342|ref|NP_377011.1| - 0.039 14.1 22.5 0.69 10.0 12.3 3.0 1 1 2 3 3 3 0 Gammaherpesvirus protein of unknown function (DUF848) CREPT PF16566.5 gi|15921342|ref|NP_377011.1| - 0.041 14.1 24.1 0.26 11.5 10.9 2.6 1 1 2 3 3 3 0 Cell-cycle alteration and expression-elevated protein in tumour Csm1_N PF18504.1 gi|15921342|ref|NP_377011.1| - 0.044 14.1 33.9 1.7 9.0 4.4 5.1 1 1 3 4 4 4 0 Csm1 N-terminal domain TPR_MLP1_2 PF07926.12 gi|15921342|ref|NP_377011.1| - 0.049 13.7 39.8 0.93 9.6 20.7 2.9 1 1 1 2 2 2 0 TPR/MLP1/MLP2-like protein DUF4407 PF14362.6 gi|15921342|ref|NP_377011.1| - 0.06 12.7 30.6 2.3 7.5 30.6 2.1 1 1 0 1 1 1 0 Domain of unknown function (DUF4407) DUF4618 PF15397.6 gi|15921342|ref|NP_377011.1| - 0.062 12.7 30.4 0.59 9.5 7.1 3.8 1 1 2 3 3 3 0 Domain of unknown function (DUF4618) DASH_Duo1 PF08651.10 gi|15921342|ref|NP_377011.1| - 0.072 12.9 21.6 1.1 9.1 4.2 4.2 1 1 2 4 4 4 0 DASH complex subunit Duo1 FH2 PF02181.23 gi|15921342|ref|NP_377011.1| - 0.077 12.1 19.4 0.38 9.8 8.4 2.4 1 1 1 2 2 2 0 Formin Homology 2 Domain BCDHK_Adom3 PF10436.9 gi|15921342|ref|NP_377011.1| - 0.084 12.7 15.8 1.8 8.4 4.3 3.3 1 1 2 3 3 3 0 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase Prefoldin PF02996.17 gi|15921342|ref|NP_377011.1| - 0.085 12.8 32.9 0.51 10.3 4.4 4.7 1 1 4 5 5 5 0 Prefoldin subunit ALIX_LYPXL_bnd PF13949.6 gi|15921342|ref|NP_377011.1| - 0.092 12.0 27.3 0.38 10.0 27.2 1.9 1 1 0 1 1 1 0 ALIX V-shaped domain binding to HIV CC2-LZ PF16516.5 gi|15921342|ref|NP_377011.1| - 0.11 12.9 28.3 2 8.8 6.6 4.2 1 1 3 4 4 4 0 Leucine zipper of domain CC2 of NEMO, NF-kappa-B essential modulator CENP-Q PF13094.6 gi|15921342|ref|NP_377011.1| - 0.11 12.7 28.6 1 9.5 3.7 3.8 1 1 3 4 4 4 0 CENP-Q, a CENPA-CAD centromere complex subunit GCP_N_terminal PF17681.1 gi|15921342|ref|NP_377011.1| - 0.11 12.1 8.6 0.17 11.5 8.6 1.3 1 0 0 1 1 1 0 Gamma tubulin complex component N-terminal DUF4763 PF15960.5 gi|15921342|ref|NP_377011.1| - 0.12 11.6 23.8 1.9 7.7 9.9 3.1 1 1 2 3 3 3 0 Domain of unknown function (DUF4763) Sec8_exocyst PF04048.14 gi|15921342|ref|NP_377011.1| - 0.14 12.0 23.2 0.29 11.0 6.4 2.7 1 1 1 2 2 2 0 Sec8 exocyst complex component specific domain HAUS-augmin3 PF14932.6 gi|15921342|ref|NP_377011.1| - 0.15 11.7 29.5 1.4 8.5 12.3 2.3 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 3 DUF1296 PF06972.11 gi|15921342|ref|NP_377011.1| - 0.15 12.2 19.5 5.1 7.3 0.5 6.2 3 1 3 6 6 4 0 Protein of unknown function (DUF1296) zf-C4H2 PF10146.9 gi|15921342|ref|NP_377011.1| - 0.16 12.3 26.1 1.7 8.9 15.6 2.2 1 1 1 2 2 2 0 Zinc finger-containing protein DUF3130 PF11328.8 gi|15921342|ref|NP_377011.1| - 0.16 12.2 6.1 7.3 6.9 0.9 3.5 1 1 2 3 3 3 0 Protein of unknown function (DUF3130 RmuC PF02646.16 gi|15921342|ref|NP_377011.1| - 0.17 11.0 24.8 0.27 10.3 5.0 3.2 1 1 3 4 4 4 0 RmuC family TMF_TATA_bd PF12325.8 gi|15921342|ref|NP_377011.1| - 0.17 12.1 27.9 2.3 8.5 5.8 3.2 1 1 2 3 3 3 0 TATA element modulatory factor 1 TATA binding DUF4201 PF13870.6 gi|15921342|ref|NP_377011.1| - 0.18 11.5 24.3 0.37 10.5 19.1 2.9 1 1 1 2 2 2 0 Domain of unknown function (DUF4201) OmpH PF03938.14 gi|15921342|ref|NP_377011.1| - 0.18 12.2 43.6 0.16 12.3 22.3 2.8 2 1 1 3 3 2 0 Outer membrane protein (OmpH-like) DUF641 PF04859.12 gi|15921342|ref|NP_377011.1| - 0.19 12.0 27.0 2.7 8.3 11.0 3.4 1 1 2 3 3 3 0 Plant protein of unknown function (DUF641) PMEI PF04043.15 gi|15921342|ref|NP_377011.1| - 0.21 11.9 10.6 0.49 10.7 4.2 2.2 1 1 1 2 2 2 0 Plant invertase/pectin methylesterase inhibitor FAM184 PF15665.5 gi|15921342|ref|NP_377011.1| - 0.21 11.3 30.1 3.5 7.3 29.7 2.3 1 1 0 1 1 1 0 Family with sequence similarity 184, A and B FmiP_Thoc5 PF09766.9 gi|15921342|ref|NP_377011.1| - 0.22 10.8 25.4 0.74 9.0 2.2 3.1 1 1 2 3 3 3 0 Fms-interacting protein/Thoc5 KASH_CCD PF14662.6 gi|15921342|ref|NP_377011.1| - 0.22 11.3 32.2 0.21 11.4 26.2 2.4 1 1 1 2 2 2 0 Coiled-coil region of CCDC155 or KASH Syntaxin-6_N PF09177.11 gi|15921342|ref|NP_377011.1| - 0.24 12.0 22.4 5.8 7.5 1.7 3.1 1 1 1 2 2 2 0 Syntaxin 6, N-terminal TPR_12 PF13424.6 gi|15921342|ref|NP_377011.1| - 0.27 11.6 13.7 0.79 10.1 1.2 4.8 2 1 0 3 3 2 0 Tetratricopeptide repeat DUF2552 PF10827.8 gi|15921342|ref|NP_377011.1| - 0.28 11.4 5.1 1.8 8.8 0.2 3.4 1 1 2 3 3 2 0 Protein of unknown function (DUF2552) DUF4559 PF15112.6 gi|15921342|ref|NP_377011.1| - 0.29 10.8 18.2 0.43 10.2 18.2 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4559) IKKbetaNEMObind PF12179.8 gi|15921342|ref|NP_377011.1| - 0.29 11.2 16.1 3.2 7.9 0.1 6.3 2 1 4 7 7 5 0 I-kappa-kinase-beta NEMO binding domain Hrs_helical PF12210.8 gi|15921342|ref|NP_377011.1| - 0.29 11.7 23.6 6.1 7.5 1.3 3.9 1 1 3 4 4 4 0 Hepatocyte growth factor-regulated tyrosine kinase substrate RPW8 PF05659.11 gi|15921342|ref|NP_377011.1| - 0.3 10.8 16.8 4.9 6.9 4.2 3.2 1 1 2 3 3 3 0 Arabidopsis broad-spectrum mildew resistance protein RPW8 HTH_Tnp_Mu_2 PF09039.11 gi|15921342|ref|NP_377011.1| - 0.31 11.1 4.2 9.6 6.3 0.4 2.8 1 1 1 2 2 2 0 Mu DNA binding, I gamma subdomain RPN7 PF10602.9 gi|15921342|ref|NP_377011.1| - 0.31 10.7 11.8 0.11 12.2 2.3 2.8 1 1 1 3 3 3 0 26S proteasome subunit RPN7 CENP-K PF11802.8 gi|15921342|ref|NP_377011.1| - 0.31 10.6 27.0 0.25 10.9 17.2 2.3 1 1 1 2 2 2 0 Centromere-associated protein K DUF1487 PF07368.11 gi|15921342|ref|NP_377011.1| - 0.35 10.3 8.4 0.74 9.2 3.1 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1487) RNA_pol_L_2 PF13656.6 gi|15921342|ref|NP_377011.1| - 0.36 10.6 9.6 5.6 6.8 0.4 4.3 2 2 2 4 4 4 0 RNA polymerase Rpb3/Rpb11 dimerisation domain DUF3818 PF12825.7 gi|15921342|ref|NP_377011.1| - 0.4 9.6 20.6 0.7 8.9 1.8 3.4 1 1 2 3 3 3 0 Domain of unknown function in PX-proteins (DUF3818) Vps51 PF08700.11 gi|15921342|ref|NP_377011.1| - 0.41 10.8 18.0 5.7 7.1 1.1 4.2 1 1 2 4 4 4 0 Vps51/Vps67 DUF4298 PF14131.6 gi|15921342|ref|NP_377011.1| - 0.43 10.6 23.5 0.67 9.9 2.6 4.4 3 1 1 4 4 4 0 Domain of unknown function (DUF4298) DivIC PF04977.15 gi|15921342|ref|NP_377011.1| - 0.44 10.4 37.1 0.44 10.3 8.9 4.7 1 1 3 4 4 4 0 Septum formation initiator DUF2203 PF09969.9 gi|15921342|ref|NP_377011.1| - 0.45 11.3 23.5 0.46 11.2 4.3 3.3 1 1 1 2 2 1 0 Uncharacterized conserved protein (DUF2203) FliE PF02049.18 gi|15921342|ref|NP_377011.1| - 0.47 10.6 23.4 1.8 8.8 7.7 3.0 1 1 2 3 3 3 0 Flagellar hook-basal body complex protein FliE DASH_Dad4 PF08650.10 gi|15921342|ref|NP_377011.1| - 0.49 10.4 9.2 2.3 8.2 1.0 3.9 1 1 2 3 3 3 0 DASH complex subunit Dad4 DUF3450 PF11932.8 gi|15921342|ref|NP_377011.1| - 0.52 9.6 36.5 2.5 7.3 18.6 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) DASH_Dam1 PF08653.10 gi|15921342|ref|NP_377011.1| - 0.54 10.1 5.1 33 4.4 0.2 4.2 2 2 3 5 5 4 0 DASH complex subunit Dam1 ECM11 PF15463.6 gi|15921342|ref|NP_377011.1| - 0.54 10.8 18.3 1.2 9.7 2.5 3.0 1 1 1 2 2 2 0 Extracellular mutant protein 11 FlaC_arch PF05377.11 gi|15921342|ref|NP_377011.1| - 0.61 10.5 19.7 3.1 8.3 1.6 4.7 1 1 2 3 3 2 0 Flagella accessory protein C (FlaC) TPR_11 PF13414.6 gi|15921342|ref|NP_377011.1| - 0.62 9.8 26.9 3.2 7.5 0.3 7.5 7 1 2 9 9 6 0 TPR repeat XhlA PF10779.9 gi|15921342|ref|NP_377011.1| - 0.64 10.3 22.8 0.54 10.5 1.9 4.1 1 1 2 4 4 4 0 Haemolysin XhlA SYCE1 PF15233.6 gi|15921342|ref|NP_377011.1| - 0.66 10.0 32.1 0.031 14.4 19.0 2.4 1 1 1 2 2 2 0 Synaptonemal complex central element protein 1 HAP1_N PF04849.13 gi|15921342|ref|NP_377011.1| - 0.69 9.1 28.8 8.6 5.5 28.8 2.3 1 1 0 1 1 1 0 HAP1 N-terminal conserved region KELK PF15796.5 gi|15921342|ref|NP_377011.1| - 0.69 10.4 29.2 0.59 10.6 6.3 3.5 1 1 2 3 3 3 0 KELK-motif containing domain of MRCK Ser/Thr protein kinase DUF148 PF02520.17 gi|15921342|ref|NP_377011.1| - 0.7 10.0 31.0 2.8 8.1 6.5 3.4 1 1 2 3 3 3 0 Domain of unknown function DUF148 Peptidase_S46 PF10459.9 gi|15921342|ref|NP_377011.1| - 0.74 8.4 20.2 0.13 10.9 5.0 2.0 1 1 1 2 2 2 0 Peptidase S46 V_ATPase_I PF01496.19 gi|15921342|ref|NP_377011.1| - 0.79 7.6 21.4 2.1 6.1 21.4 1.6 1 1 0 1 1 1 0 V-type ATPase 116kDa subunit family YabA PF06156.13 gi|15921342|ref|NP_377011.1| - 0.8 10.4 22.0 25 5.6 5.3 3.6 1 1 2 3 3 3 0 Initiation control protein YabA Laminin_II PF06009.12 gi|15921342|ref|NP_377011.1| - 0.88 9.6 29.3 2.5 8.1 1.8 3.3 1 1 2 3 3 3 0 Laminin Domain II VWA_2 PF13519.6 gi|15921342|ref|NP_377011.1| - 0.88 10.2 10.1 9.5 6.9 4.3 3.1 1 1 2 3 3 2 0 von Willebrand factor type A domain IFT57 PF10498.9 gi|15921342|ref|NP_377011.1| - 0.89 8.5 28.8 3 6.7 14.2 2.2 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 Mod_r PF07200.13 gi|15921342|ref|NP_377011.1| - 1 9.5 31.3 3 8.0 16.4 2.5 1 1 1 2 2 2 0 Modifier of rudimentary (Mod(r)) protein AATF-Che1 PF13339.6 gi|15921342|ref|NP_377011.1| - 1 10.0 18.0 1.5e+03 -0.2 18.1 2.8 1 1 0 1 1 0 0 Apoptosis antagonizing transcription factor PspA_IM30 PF04012.12 gi|15921342|ref|NP_377011.1| - 1.1 8.8 36.0 0.57 9.7 10.8 2.4 1 1 1 2 2 2 0 PspA/IM30 family Tweety PF04906.13 gi|15921342|ref|NP_377011.1| - 1.1 7.8 18.3 2.9 6.5 5.1 2.1 1 1 1 2 2 2 0 Tweety FAA_hydro_N_2 PF18288.1 gi|15921342|ref|NP_377011.1| - 1.1 9.7 13.6 3.2 8.2 0.9 3.8 1 1 3 4 4 3 0 Fumarylacetoacetase N-terminal domain 2 Seryl_tRNA_N PF02403.22 gi|15921342|ref|NP_377011.1| - 1.2 9.4 32.2 4.3 7.6 8.2 3.3 1 1 2 3 3 3 0 Seryl-tRNA synthetase N-terminal domain Snapin_Pallidin PF14712.6 gi|15921342|ref|NP_377011.1| - 1.2 9.6 29.1 6.4 7.3 14.0 3.2 1 1 2 3 3 3 0 Snapin/Pallidin HIP1_clath_bdg PF16515.5 gi|15921342|ref|NP_377011.1| - 1.2 9.8 32.2 1.6 9.4 8.0 3.3 1 1 2 3 3 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 Occludin_ELL PF07303.13 gi|15921342|ref|NP_377011.1| - 1.3 9.8 13.4 2 9.2 3.3 3.1 1 1 2 3 3 3 0 Occludin homology domain DHR10 PF18595.1 gi|15921342|ref|NP_377011.1| - 1.5 8.9 36.7 1.8 8.7 14.8 2.6 1 1 0 2 2 2 0 Designed helical repeat protein 10 domain ALMT PF11744.8 gi|15921342|ref|NP_377011.1| - 1.5 7.6 21.4 7.3 5.3 11.0 2.3 1 1 1 2 2 2 0 Aluminium activated malate transporter HemX PF04375.14 gi|15921342|ref|NP_377011.1| - 1.6 8.0 36.8 1.3 8.3 8.7 2.9 1 1 1 2 2 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase CENP-H PF05837.12 gi|15921342|ref|NP_377011.1| - 1.7 9.1 31.9 6 7.3 13.7 3.3 1 1 3 4 4 4 0 Centromere protein H (CENP-H) SKA1 PF07160.12 gi|15921342|ref|NP_377011.1| - 1.7 8.5 25.4 2.8 7.7 6.7 2.6 1 1 1 2 2 2 0 Spindle and kinetochore-associated protein 1 GvpO PF05800.11 gi|15921342|ref|NP_377011.1| - 1.7 8.7 14.8 6.3 6.9 1.1 4.0 2 1 3 5 5 3 0 Gas vesicle synthesis protein GvpO Alpha-2-MRAP_C PF06401.11 gi|15921342|ref|NP_377011.1| - 1.7 8.5 18.5 6.6 6.6 8.5 2.9 1 1 2 3 3 3 0 Alpha-2-macroglobulin RAP, C-terminal domain Gp58 PF07902.11 gi|15921342|ref|NP_377011.1| - 1.8 6.8 20.2 4 5.6 4.6 2.7 1 1 2 3 3 3 0 gp58-like protein Phage_tail_NK PF16532.5 gi|15921342|ref|NP_377011.1| - 1.8 8.1 6.1 17 5.0 3.3 2.8 1 1 1 2 2 2 0 Sf6-type phage tail needle knob or tip of some Caudovirales FUSC PF04632.12 gi|15921342|ref|NP_377011.1| - 1.8 7.0 15.7 4.5 5.7 14.3 1.8 1 1 1 2 2 2 0 Fusaric acid resistance protein family Med9 PF07544.13 gi|15921342|ref|NP_377011.1| - 1.9 8.7 29.7 7.3 6.8 4.3 3.6 1 1 1 2 2 1 0 RNA polymerase II transcription mediator complex subunit 9 PKHD_C PF18331.1 gi|15921342|ref|NP_377011.1| - 2 8.5 10.4 59 3.8 0.1 4.9 2 2 2 5 5 4 0 PKHD-type hydroxylase C-terminal domain Serine_rich PF08824.10 gi|15921342|ref|NP_377011.1| - 2.1 8.3 15.5 4.5 7.3 8.4 2.6 1 1 1 2 2 2 0 Serine rich protein interaction domain AIP3 PF03915.13 gi|15921342|ref|NP_377011.1| - 2.2 7.3 26.5 5.8 5.9 26.4 1.6 1 1 0 1 1 1 0 Actin interacting protein 3 T3SSipB PF16535.5 gi|15921342|ref|NP_377011.1| - 2.4 8.6 29.7 5.6 7.4 14.1 2.4 1 1 1 2 2 2 0 Type III cell invasion protein SipB Sec20 PF03908.13 gi|15921342|ref|NP_377011.1| - 2.4 8.1 20.1 2.3 8.2 1.6 3.8 1 1 4 5 5 5 0 Sec20 FliD_N PF02465.18 gi|15921342|ref|NP_377011.1| - 2.4 8.9 22.7 8.3 7.2 3.8 4.0 1 1 2 3 3 3 0 Flagellar hook-associated protein 2 N-terminus GAT PF03127.14 gi|15921342|ref|NP_377011.1| - 2.5 8.5 16.6 17 5.8 2.5 3.6 1 1 2 3 3 3 0 GAT domain USP8_interact PF08941.10 gi|15921342|ref|NP_377011.1| - 2.5 7.9 22.5 5.1 6.9 6.6 3.0 1 1 2 3 3 3 0 USP8 interacting LMBR1 PF04791.16 gi|15921342|ref|NP_377011.1| - 2.5 6.9 12.7 3.8 6.3 12.7 1.3 1 0 0 1 1 1 0 LMBR1-like membrane protein DivIVA PF05103.13 gi|15921342|ref|NP_377011.1| - 2.5 8.2 35.7 2.2 8.4 18.4 2.7 1 1 1 2 2 2 0 DivIVA protein DUF724 PF05266.14 gi|15921342|ref|NP_377011.1| - 2.7 7.8 28.2 5.6 6.8 10.2 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF724) PI3K_P85_iSH2 PF16454.5 gi|15921342|ref|NP_377011.1| - 3 7.4 26.1 23 4.6 26.1 2.2 1 1 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain Mce4_CUP1 PF11887.8 gi|15921342|ref|NP_377011.1| - 3.1 7.2 9.1 4.8 6.5 4.3 2.0 1 1 1 2 2 2 0 Cholesterol uptake porter CUP1 of Mce4, putative KxDL PF10241.9 gi|15921342|ref|NP_377011.1| - 3.1 8.1 24.0 1.7 8.9 9.3 3.8 2 1 3 5 5 4 0 Uncharacterized conserved protein IFT20 PF14931.6 gi|15921342|ref|NP_377011.1| - 3.1 8.0 29.1 3.1 8.0 8.9 3.4 1 1 2 3 3 3 0 Intraflagellar transport complex B, subunit 20 LRRFIP PF09738.9 gi|15921342|ref|NP_377011.1| - 3.3 7.1 24.3 4.8 6.6 24.3 1.2 1 0 0 1 1 1 0 LRRFIP family DUF1465 PF07323.12 gi|15921342|ref|NP_377011.1| - 3.4 7.5 16.6 2 8.3 4.2 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1465) EPO_TPO PF00758.18 gi|15921342|ref|NP_377011.1| - 3.4 7.7 14.1 12 5.9 6.2 2.9 1 1 2 3 3 3 0 Erythropoietin/thrombopoietin FTCD_C PF04961.12 gi|15921342|ref|NP_377011.1| - 4.1 7.1 14.6 2.4 7.9 3.7 2.3 1 1 1 2 2 2 0 Formiminotransferase-cyclodeaminase CmlA_N PF18456.1 gi|15921342|ref|NP_377011.1| - 4.2 6.6 21.1 1.3 8.3 2.1 3.5 1 1 2 3 3 3 0 Diiron non-heme beta-hydroxylase N-terminal domain Nup88 PF10168.9 gi|15921342|ref|NP_377011.1| - 4.3 5.0 27.4 7.1 4.3 27.4 1.3 1 0 0 1 1 1 0 Nuclear pore component PhoU PF01895.19 gi|15921342|ref|NP_377011.1| - 4.5 7.8 12.8 1.1e+04 -3.0 12.8 3.5 1 1 0 1 1 0 0 PhoU domain DUF5082 PF16888.5 gi|15921342|ref|NP_377011.1| - 4.5 7.6 29.8 2.3 8.5 24.1 2.9 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) Ntox28 PF15605.6 gi|15921342|ref|NP_377011.1| - 4.9 7.4 8.0 3.9 7.8 0.9 3.0 1 1 0 2 2 2 0 Bacterial toxin 28 Lectin_N PF03954.14 gi|15921342|ref|NP_377011.1| - 5.3 6.8 18.1 12 5.7 3.6 2.8 1 1 1 2 2 2 0 Hepatic lectin, N-terminal domain MIP-T3_C PF17749.1 gi|15921342|ref|NP_377011.1| - 5.7 6.9 27.7 4 7.4 2.9 2.6 1 1 1 2 2 2 0 Microtubule-binding protein MIP-T3 C-terminal region TPR_6 PF13174.6 gi|15921342|ref|NP_377011.1| - 5.7 7.8 20.3 17 6.3 0.2 6.6 2 1 4 6 6 4 0 Tetratricopeptide repeat Tektin PF03148.14 gi|15921342|ref|NP_377011.1| - 6 5.5 28.6 4 6.1 5.8 2.9 1 1 2 3 3 3 0 Tektin family Retrotrans_gag PF03732.17 gi|15921342|ref|NP_377011.1| - 6 7.2 10.3 16 5.9 1.7 3.3 1 1 1 2 2 2 0 Retrotransposon gag protein Lzipper-MIP1 PF14389.6 gi|15921342|ref|NP_377011.1| - 6 7.2 32.8 0.57 10.5 5.3 4.7 3 1 2 5 5 4 0 Leucine-zipper of ternary complex factor MIP1 IBV_3A PF03617.13 gi|15921342|ref|NP_377011.1| - 6.3 6.9 9.8 62 3.7 0.3 3.8 3 0 0 3 3 3 0 IBV 3A protein P4Ha_N PF08336.11 gi|15921342|ref|NP_377011.1| - 6.3 6.8 22.5 19 5.3 3.1 4.1 1 1 2 3 3 3 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region L27 PF02828.16 gi|15921342|ref|NP_377011.1| - 6.4 6.6 12.7 6.1 6.7 0.5 4.2 3 1 0 4 4 3 0 L27 domain YscO PF07321.12 gi|15921342|ref|NP_377011.1| - 6.6 6.7 37.2 8.1 6.4 23.3 3.1 1 1 2 3 3 3 0 Type III secretion protein YscO HAUS6_N PF14661.6 gi|15921342|ref|NP_377011.1| - 6.7 6.2 25.1 9.6 5.7 13.0 2.3 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 6 N-terminus DUF2400 PF09674.10 gi|15921342|ref|NP_377011.1| - 6.9 6.6 11.4 18 5.3 3.0 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF2400) Sulfatase_C PF14707.6 gi|15921342|ref|NP_377011.1| - 7.1 7.4 14.9 20 6.0 2.7 3.5 1 1 3 4 4 3 0 C-terminal region of aryl-sulfatase Com_YlbF PF06133.11 gi|15921342|ref|NP_377011.1| - 7.2 7.3 31.1 1.1e+02 3.5 8.8 3.5 1 1 1 2 2 2 0 Control of competence regulator ComK, YlbF/YmcA KLRAQ PF10205.9 gi|15921342|ref|NP_377011.1| - 7.5 6.9 27.7 8.1 6.8 12.0 3.2 1 1 2 3 3 3 0 Predicted coiled-coil domain-containing protein Cauli_AT PF03233.13 gi|15921342|ref|NP_377011.1| - 7.9 6.4 23.0 4.7 7.1 6.5 3.4 1 1 2 3 3 3 0 Aphid transmission protein Sigma54_DBD PF04552.13 gi|15921342|ref|NP_377011.1| - 8.1 6.1 21.4 1.5 8.5 2.0 4.6 2 1 3 5 5 4 0 Sigma-54, DNA binding domain Golgin_A5 PF09787.9 gi|15921342|ref|NP_377011.1| - 8.6 5.7 31.8 37 3.6 31.7 1.8 1 1 0 1 1 1 0 Golgin subfamily A member 5 TPR_2 PF07719.17 gi|15921342|ref|NP_377011.1| - 9.3 6.6 20.4 40 4.7 0.2 6.7 5 2 2 7 7 5 0 Tetratricopeptide repeat PaREP1 PF05942.11 gi|15921343|ref|NP_377012.1| - 8e-27 93.4 0.3 9.6e-27 93.2 0.3 1.1 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family OrfB_Zn_ribbon PF07282.11 gi|15921345|ref|NP_377014.1| - 0.11 12.5 0.0 0.84 9.6 0.0 2.4 3 0 0 3 3 3 0 Putative transposase DNA-binding domain DUF5065 PF16723.5 gi|15921345|ref|NP_377014.1| - 0.26 11.3 2.7 15 5.7 0.0 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF5065) SpoVIF PF14069.6 gi|15921345|ref|NP_377014.1| - 7.1 6.5 8.7 5.4 6.9 0.5 3.1 3 1 0 3 3 3 0 Stage VI sporulation protein F Resolvase PF00239.21 gi|15921346|ref|NP_377015.1| - 3e-26 92.3 0.5 4e-26 91.9 0.5 1.1 1 0 0 1 1 1 1 Resolvase, N terminal domain HTH_17 PF12728.7 gi|15921346|ref|NP_377015.1| - 6e-15 55.2 1.6 1.1e-14 54.3 0.1 2.3 3 0 0 3 3 3 1 Helix-turn-helix domain DUF1323 PF07037.11 gi|15921346|ref|NP_377015.1| - 0.0013 19.1 0.1 0.0039 17.6 0.1 1.9 1 1 0 1 1 1 1 Putative transcription regulator (DUF1323) MerR PF00376.23 gi|15921346|ref|NP_377015.1| - 0.0041 16.9 0.0 0.0098 15.6 0.0 1.7 1 0 0 1 1 1 1 MerR family regulatory protein cwf21 PF08312.12 gi|15921346|ref|NP_377015.1| - 0.013 15.7 1.6 0.14 12.4 0.3 2.5 2 0 0 2 2 2 0 cwf21 domain TFIID_20kDa PF03847.13 gi|15921346|ref|NP_377015.1| - 0.018 15.6 0.0 0.06 13.9 0.0 1.9 2 0 0 2 2 2 0 Transcription initiation factor TFIID subunit A ApoO PF09769.9 gi|15921346|ref|NP_377015.1| - 0.069 13.1 0.0 0.81 9.6 0.0 2.1 2 0 0 2 2 2 0 Apolipoprotein O MerR_1 PF13411.6 gi|15921346|ref|NP_377015.1| - 0.075 13.1 0.1 0.22 11.7 0.0 1.8 2 0 0 2 2 2 0 MerR HTH family regulatory protein PaREP1 PF05942.11 gi|15921347|ref|NP_377016.1| - 8.6e-24 83.7 3.5 1.3e-23 83.1 3.5 1.3 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family HEPN PF05168.14 gi|15921347|ref|NP_377016.1| - 7.9e-06 26.0 2.5 1.5e-05 25.1 2.5 1.4 1 0 0 1 1 1 1 HEPN domain DUF5618 PF18498.1 gi|15921347|ref|NP_377016.1| - 0.0011 19.2 0.2 0.0017 18.5 0.2 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF5618) HhH-GPD PF00730.25 gi|15921348|ref|NP_377017.1| - 3.1e-12 46.9 0.0 5.5e-12 46.1 0.0 1.4 1 0 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein OGG_N PF07934.12 gi|15921348|ref|NP_377017.1| - 0.026 14.6 0.0 0.056 13.5 0.0 1.5 1 0 0 1 1 1 0 8-oxoguanine DNA glycosylase, N-terminal domain RuvA_C PF07499.13 gi|15921348|ref|NP_377017.1| - 0.16 12.4 0.0 0.44 11.0 0.0 1.8 1 0 0 1 1 1 0 RuvA, C-terminal domain Oxidored_molyb PF00174.19 gi|15921349|ref|NP_377018.1| - 3.4e-35 121.2 0.0 4.2e-35 120.9 0.0 1.1 1 0 0 1 1 1 1 Oxidoreductase molybdopterin binding domain Y1_Tnp PF01797.16 gi|15921350|ref|NP_377019.1| - 5e-43 146.1 0.0 5.7e-43 145.9 0.0 1.0 1 0 0 1 1 1 1 Transposase IS200 like OrfB_IS605 PF01385.19 gi|15921352|ref|NP_377021.1| - 5e-36 123.5 0.6 7.3e-36 123.0 0.6 1.2 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|15921352|ref|NP_377021.1| - 1.1e-19 70.1 0.0 2.2e-19 69.2 0.0 1.5 1 0 0 1 1 1 1 Putative transposase DNA-binding domain RuvX PF03652.15 gi|15921352|ref|NP_377021.1| - 3.6e-06 27.4 0.0 6.1e-06 26.7 0.0 1.3 1 0 0 1 1 1 1 Holliday junction resolvase VWD PF00094.25 gi|15921352|ref|NP_377021.1| - 0.068 13.4 0.4 0.18 12.1 0.3 1.7 1 1 1 2 2 2 0 von Willebrand factor type D domain ABC_membrane PF00664.23 gi|15921353|ref|NP_377022.1| - 1.1e-46 159.7 11.8 1.7e-46 159.1 11.8 1.3 1 0 0 1 1 1 1 ABC transporter transmembrane region ABC_tran PF00005.27 gi|15921353|ref|NP_377022.1| - 1.8e-36 125.6 0.0 9.7e-36 123.3 0.0 2.2 2 0 0 2 2 2 1 ABC transporter DUF1854 PF08909.11 gi|15921353|ref|NP_377022.1| - 5.6e-35 120.0 0.2 2.4e-34 117.9 0.1 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF1854) SMC_N PF02463.19 gi|15921353|ref|NP_377022.1| - 1.4e-05 24.7 1.5 0.0044 16.5 0.0 2.6 1 1 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_21 PF13304.6 gi|15921353|ref|NP_377022.1| - 3.8e-05 23.6 3.9 0.037 13.8 0.1 3.4 2 1 1 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system ABC_membrane_3 PF13748.6 gi|15921353|ref|NP_377022.1| - 0.0007 18.9 8.7 0.0018 17.6 5.5 2.5 2 1 0 2 2 2 1 ABC transporter transmembrane region AAA_29 PF13555.6 gi|15921353|ref|NP_377022.1| - 0.0012 18.5 0.2 0.0034 17.1 0.2 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF87 PF01935.17 gi|15921353|ref|NP_377022.1| - 0.0022 18.1 0.1 0.011 15.9 0.1 2.2 1 0 0 1 1 1 1 Helicase HerA, central domain AAA_5 PF07728.14 gi|15921353|ref|NP_377022.1| - 0.0025 17.8 0.0 0.48 10.4 0.0 3.1 3 0 0 3 3 3 1 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|15921353|ref|NP_377022.1| - 0.0042 17.5 0.0 0.45 10.9 0.0 2.7 2 0 0 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|15921353|ref|NP_377022.1| - 0.0071 16.6 0.1 0.056 13.7 0.1 2.6 1 1 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|15921353|ref|NP_377022.1| - 0.0073 16.0 0.3 0.035 13.8 0.0 2.1 2 0 0 2 2 2 1 AAA domain MMR_HSR1 PF01926.23 gi|15921353|ref|NP_377022.1| - 0.0095 16.0 0.1 0.13 12.3 0.0 2.7 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_18 PF13238.6 gi|15921353|ref|NP_377022.1| - 0.02 15.4 0.0 0.094 13.3 0.0 2.3 1 0 0 1 1 1 0 AAA domain RsgA_GTPase PF03193.16 gi|15921353|ref|NP_377022.1| - 0.042 13.7 0.2 0.44 10.4 0.0 2.5 2 0 0 2 2 2 0 RsgA GTPase ATP-synt_ab PF00006.25 gi|15921353|ref|NP_377022.1| - 0.095 12.3 0.0 0.59 9.7 0.0 2.0 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain DUF1978 PF09321.10 gi|15921353|ref|NP_377022.1| - 0.096 12.0 0.7 0.27 10.5 0.2 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF1978) AAA PF00004.29 gi|15921353|ref|NP_377022.1| - 0.098 13.1 0.0 0.52 10.7 0.0 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_33 PF13671.6 gi|15921353|ref|NP_377022.1| - 0.19 11.9 0.0 0.74 10.0 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_15 PF13175.6 gi|15921353|ref|NP_377022.1| - 0.38 10.4 17.8 0.33 10.6 11.3 3.8 2 1 0 2 2 2 0 AAA ATPase domain NTP_transf_2 PF01909.23 gi|15921354|ref|NP_377023.1| - 1.4e-11 44.5 0.3 1.6e-11 44.3 0.3 1.2 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|15921354|ref|NP_377023.1| - 7.1e-06 26.0 0.3 8.9e-06 25.7 0.3 1.3 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase DUF294 PF03445.13 gi|15921354|ref|NP_377023.1| - 0.037 13.8 0.0 0.041 13.7 0.0 1.1 1 0 0 1 1 1 0 Putative nucleotidyltransferase DUF294 MazE_antitoxin PF04014.18 gi|15921355|ref|NP_377024.1| - 1.1e-12 47.5 0.3 2e-12 46.7 0.2 1.5 1 1 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin AbrB-like PF14250.6 gi|15921355|ref|NP_377024.1| - 0.04 14.0 0.1 0.092 12.8 0.0 1.6 2 0 0 2 2 2 0 AbrB-like transcriptional regulator DUF2118 PF09891.9 gi|15921355|ref|NP_377024.1| - 0.065 13.2 0.3 0.088 12.8 0.3 1.2 1 0 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2118) PIN PF01850.21 gi|15921356|ref|NP_377025.1| - 3.6e-16 59.8 0.0 3.9e-16 59.7 0.0 1.0 1 0 0 1 1 1 1 PIN domain DUF4411 PF14367.6 gi|15921356|ref|NP_377025.1| - 0.1 12.5 0.0 0.12 12.3 0.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4411) Glyco_hydro_57 PF03065.15 gi|15921357|ref|NP_377026.1| - 2e-45 155.4 1.2 6.8e-38 130.7 0.0 2.4 1 1 1 2 2 2 2 Glycosyl hydrolase family 57 TcfC PF16967.5 gi|15921357|ref|NP_377026.1| - 0.0015 18.0 0.1 0.004 16.6 0.1 1.8 1 0 0 1 1 1 1 E-set like domain SBP_bac_8 PF13416.6 gi|15921358|ref|NP_377027.1| - 7.6e-19 68.6 10.6 7.6e-19 68.6 10.6 1.5 1 1 0 1 1 1 1 Bacterial extracellular solute-binding protein BPD_transp_1 PF00528.22 gi|15921359|ref|NP_377028.1| - 3.7e-16 59.4 17.4 4.3e-16 59.2 17.4 1.1 1 0 0 1 1 1 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|15921360|ref|NP_377029.1| - 4.4e-13 49.4 24.3 4.4e-13 49.4 24.3 2.1 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|15921361|ref|NP_377030.1| - 2.8e-32 112.1 0.0 4.7e-32 111.4 0.0 1.4 1 0 0 1 1 1 1 ABC transporter OB_MalK PF17912.1 gi|15921361|ref|NP_377030.1| - 2.2e-10 41.2 0.1 6.6e-10 39.7 0.1 1.9 1 0 0 1 1 1 1 MalK OB fold domain TOBE_2 PF08402.10 gi|15921361|ref|NP_377030.1| - 3.4e-10 39.9 0.0 7.3e-10 38.9 0.0 1.6 1 0 0 1 1 1 1 TOBE domain CysA_C_terminal PF17850.1 gi|15921361|ref|NP_377030.1| - 4.1e-07 30.5 0.0 1.2e-06 29.0 0.0 1.9 1 0 0 1 1 1 1 CysA C-terminal regulatory domain AAA_21 PF13304.6 gi|15921361|ref|NP_377030.1| - 3e-06 27.3 0.0 0.066 13.0 0.0 2.3 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system TOBE PF03459.17 gi|15921361|ref|NP_377030.1| - 0.00033 20.9 0.0 0.0017 18.6 0.0 2.3 2 0 0 2 2 2 1 TOBE domain RsgA_GTPase PF03193.16 gi|15921361|ref|NP_377030.1| - 0.0006 19.7 0.1 0.037 13.9 0.0 2.3 2 0 0 2 2 2 1 RsgA GTPase AAA_16 PF13191.6 gi|15921361|ref|NP_377030.1| - 0.00088 19.7 0.0 0.0017 18.8 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 gi|15921361|ref|NP_377030.1| - 0.0013 18.2 0.6 0.034 13.6 0.6 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|15921361|ref|NP_377030.1| - 0.0029 18.1 0.9 0.0098 16.4 0.1 2.1 3 0 0 3 3 2 1 AAA domain AAA_30 PF13604.6 gi|15921361|ref|NP_377030.1| - 0.0084 15.8 0.0 0.019 14.7 0.0 1.5 1 0 0 1 1 1 1 AAA domain NTPase_1 PF03266.15 gi|15921361|ref|NP_377030.1| - 0.011 15.7 0.3 0.51 10.2 0.0 2.4 2 0 0 2 2 2 0 NTPase Rad17 PF03215.15 gi|15921361|ref|NP_377030.1| - 0.015 15.2 0.1 0.13 12.2 0.0 2.4 3 0 0 3 3 3 0 Rad17 P-loop domain AAA_29 PF13555.6 gi|15921361|ref|NP_377030.1| - 0.016 14.9 0.0 0.033 13.9 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain ATPase_2 PF01637.18 gi|15921361|ref|NP_377030.1| - 0.016 15.1 0.0 0.029 14.3 0.0 1.5 1 0 0 1 1 1 0 ATPase domain predominantly from Archaea NACHT PF05729.12 gi|15921361|ref|NP_377030.1| - 0.041 13.8 0.0 0.077 12.9 0.0 1.4 1 0 0 1 1 1 0 NACHT domain RNA_helicase PF00910.22 gi|15921361|ref|NP_377030.1| - 0.077 13.4 0.0 0.29 11.5 0.0 2.0 2 0 0 2 2 2 0 RNA helicase AAA_19 PF13245.6 gi|15921361|ref|NP_377030.1| - 0.08 13.3 0.1 0.21 11.9 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 gi|15921361|ref|NP_377030.1| - 0.082 13.2 0.0 0.16 12.2 0.0 1.6 1 1 0 1 1 1 0 AAA domain IstB_IS21 PF01695.17 gi|15921361|ref|NP_377030.1| - 0.089 12.5 0.0 0.19 11.5 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein SRP54 PF00448.22 gi|15921361|ref|NP_377030.1| - 0.19 11.4 0.5 2 8.0 0.0 2.2 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain Glyco_hydro_15 PF00723.21 gi|15921362|ref|NP_377031.1| - 3.7e-07 29.3 1.2 3.5e-05 22.8 1.0 2.3 1 1 0 1 1 1 1 Glycosyl hydrolases family 15 DUF1270 PF06900.11 gi|15921362|ref|NP_377031.1| - 0.063 13.7 0.6 0.29 11.5 0.6 2.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1270) NapE PF06796.11 gi|15921362|ref|NP_377031.1| - 0.075 12.6 0.4 3.8 7.1 0.1 2.5 2 0 0 2 2 2 0 Periplasmic nitrate reductase protein NapE MR_MLE_C PF13378.6 gi|15921363|ref|NP_377032.1| - 4.6e-62 209.5 0.1 1.2e-61 208.1 0.0 1.6 2 0 0 2 2 2 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 gi|15921363|ref|NP_377032.1| - 4.4e-21 75.3 0.1 1.1e-20 74.0 0.0 1.7 2 0 0 2 2 2 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain adh_short_C2 PF13561.6 gi|15921364|ref|NP_377033.1| - 1.1e-67 228.1 0.2 1.2e-67 227.9 0.2 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|15921364|ref|NP_377033.1| - 2.4e-57 193.6 0.5 2.9e-57 193.3 0.5 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|15921364|ref|NP_377033.1| - 2.4e-12 47.1 0.1 3.5e-12 46.6 0.1 1.2 1 0 0 1 1 1 1 KR domain THF_DHG_CYH_C PF02882.19 gi|15921364|ref|NP_377033.1| - 0.025 13.9 0.0 0.095 12.0 0.0 1.9 1 1 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain Shigella_OspC PF06128.11 gi|15921364|ref|NP_377033.1| - 0.04 13.7 0.2 0.065 13.0 0.2 1.4 1 1 0 1 1 1 0 Shigella flexneri OspC protein Epimerase PF01370.21 gi|15921364|ref|NP_377033.1| - 0.09 12.2 0.3 0.93 8.9 0.3 2.1 1 1 0 1 1 1 0 NAD dependent epimerase/dehydratase family ZnuA PF01297.17 gi|15921364|ref|NP_377033.1| - 0.1 12.0 0.0 0.27 10.6 0.0 1.8 2 0 0 2 2 2 0 Zinc-uptake complex component A periplasmic Ribosomal_S13 PF00416.22 gi|15921364|ref|NP_377033.1| - 0.14 12.6 0.7 9.7 6.6 0.1 2.3 1 1 1 2 2 2 0 Ribosomal protein S13/S18 Thiolase_C PF02803.18 gi|15921365|ref|NP_377034.1| - 0.00063 19.4 0.2 0.002 17.8 0.0 1.9 2 0 0 2 2 2 1 Thiolase, C-terminal domain DUF35_N PF12172.8 gi|15921366|ref|NP_377035.1| - 4.2e-08 32.9 0.9 6.1e-08 32.4 0.9 1.2 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) OB_aCoA_assoc PF01796.17 gi|15921366|ref|NP_377035.1| - 4.7e-08 32.9 0.0 7.3e-08 32.3 0.0 1.2 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated HypA PF01155.19 gi|15921366|ref|NP_377035.1| - 0.00014 21.9 0.1 0.00022 21.2 0.1 1.3 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA TackOD1 PF18551.1 gi|15921366|ref|NP_377035.1| - 0.00042 20.0 0.2 0.00056 19.6 0.2 1.2 1 0 0 1 1 1 1 Thaumarchaeal output domain 1 Lar_restr_allev PF14354.6 gi|15921366|ref|NP_377035.1| - 0.0066 16.8 1.1 3 8.3 0.1 2.4 1 1 1 2 2 2 2 Restriction alleviation protein Lar NOB1_Zn_bind PF08772.11 gi|15921366|ref|NP_377035.1| - 0.0066 16.6 0.4 0.015 15.5 0.4 1.6 1 0 0 1 1 1 1 Nin one binding (NOB1) Zn-ribbon like zinc-ribbons_6 PF07191.12 gi|15921366|ref|NP_377035.1| - 0.013 15.4 0.1 0.022 14.7 0.1 1.3 1 0 0 1 1 1 0 zinc-ribbons S1 PF00575.23 gi|15921366|ref|NP_377035.1| - 0.015 15.6 0.2 0.034 14.5 0.2 1.5 1 0 0 1 1 1 0 S1 RNA binding domain zinc_ribbon_15 PF17032.5 gi|15921366|ref|NP_377035.1| - 0.016 15.9 1.9 0.022 15.5 0.9 1.7 2 0 0 2 2 2 0 zinc-ribbon family TRAM PF01938.20 gi|15921366|ref|NP_377035.1| - 0.02 14.8 0.8 0.031 14.3 0.8 1.4 1 1 0 1 1 1 0 TRAM domain NRDD PF13597.6 gi|15921366|ref|NP_377035.1| - 0.024 13.4 0.3 0.03 13.1 0.3 1.1 1 0 0 1 1 1 0 Anaerobic ribonucleoside-triphosphate reductase FYVE PF01363.21 gi|15921366|ref|NP_377035.1| - 0.027 14.6 0.4 0.037 14.1 0.4 1.3 1 0 0 1 1 1 0 FYVE zinc finger zinc_ribbon_13 PF09855.9 gi|15921366|ref|NP_377035.1| - 0.029 14.5 5.2 3.1 8.0 1.9 2.6 1 1 1 2 2 2 0 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) Mcm10 PF09332.11 gi|15921366|ref|NP_377035.1| - 0.03 13.8 0.3 0.038 13.4 0.3 1.2 1 0 0 1 1 1 0 Mcm10 replication factor zf-NADH-PPase PF09297.11 gi|15921366|ref|NP_377035.1| - 0.03 14.0 1.8 0.19 11.4 0.1 2.3 2 0 0 2 2 2 0 NADH pyrophosphatase zinc ribbon domain TFIIS_C PF01096.18 gi|15921366|ref|NP_377035.1| - 0.034 14.0 1.7 2.6 8.0 0.1 2.3 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) C6_DPF PF10170.9 gi|15921366|ref|NP_377035.1| - 0.035 14.5 1.6 0.04 14.3 0.6 1.6 2 0 0 2 2 2 0 Cysteine-rich domain RNA_POL_M_15KD PF02150.16 gi|15921366|ref|NP_377035.1| - 0.26 11.2 3.9 2.6 8.0 0.6 2.3 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit AMP-binding PF00501.28 gi|15921367|ref|NP_377036.1| - 5.9e-87 292.0 0.0 7.5e-87 291.6 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|15921367|ref|NP_377036.1| - 1.2e-23 83.8 0.3 2.5e-23 82.8 0.3 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Peptidase_M20 PF01546.28 gi|15921368|ref|NP_377037.1| - 3.4e-37 128.1 0.0 6.2e-37 127.3 0.0 1.4 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|15921368|ref|NP_377037.1| - 4.9e-19 68.3 0.0 1e-18 67.2 0.0 1.6 1 0 0 1 1 1 1 Peptidase dimerisation domain LAGLIDADG_3 PF14528.6 gi|15921368|ref|NP_377037.1| - 0.033 14.5 0.0 0.21 11.9 0.0 2.1 2 0 0 2 2 2 0 LAGLIDADG-like domain Aminotran_3 PF00202.21 gi|15921369|ref|NP_377038.1| - 4e-96 322.1 0.0 4.7e-96 321.9 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-III HTH_24 PF13412.6 gi|15921370|ref|NP_377039.1| - 2.3e-14 52.6 0.9 3.5e-14 52.1 0.9 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|15921370|ref|NP_377039.1| - 2.9e-13 49.4 0.1 4.5e-13 48.8 0.1 1.3 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain AsnC_trans_reg PF01037.21 gi|15921370|ref|NP_377039.1| - 8.2e-13 48.1 0.0 1.2e-12 47.6 0.0 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_5 PF01022.20 gi|15921370|ref|NP_377039.1| - 5.3e-06 26.2 0.2 8.6e-06 25.5 0.2 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|15921370|ref|NP_377039.1| - 0.0002 21.3 0.0 0.00029 20.8 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_11 PF08279.12 gi|15921370|ref|NP_377039.1| - 0.0034 17.3 0.3 0.0065 16.4 0.3 1.4 1 0 0 1 1 1 1 HTH domain HTH_IclR PF09339.10 gi|15921370|ref|NP_377039.1| - 0.0073 16.1 0.0 0.015 15.1 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain MarR PF01047.22 gi|15921370|ref|NP_377039.1| - 0.0076 16.2 0.1 0.031 14.2 0.1 1.9 2 0 0 2 2 2 1 MarR family MarR_2 PF12802.7 gi|15921370|ref|NP_377039.1| - 0.014 15.2 0.0 0.025 14.5 0.0 1.4 1 0 0 1 1 1 0 MarR family DUF1759 PF03564.15 gi|15921370|ref|NP_377039.1| - 0.021 14.7 0.3 0.052 13.5 0.1 1.7 2 1 0 2 2 2 0 Protein of unknown function (DUF1759) DDRGK PF09756.9 gi|15921370|ref|NP_377039.1| - 0.028 14.0 0.1 0.042 13.4 0.1 1.2 1 0 0 1 1 1 0 DDRGK domain HTH_WhiA PF02650.14 gi|15921370|ref|NP_377039.1| - 0.03 14.6 0.2 0.064 13.6 0.2 1.5 1 0 0 1 1 1 0 WhiA C-terminal HTH domain RuvB_C PF05491.13 gi|15921370|ref|NP_377039.1| - 0.033 14.0 0.4 0.078 12.9 0.2 1.8 2 0 0 2 2 2 0 RuvB C-terminal winged helix domain Mga PF05043.13 gi|15921370|ref|NP_377039.1| - 0.034 14.7 0.1 0.07 13.7 0.1 1.6 1 0 0 1 1 1 0 Mga helix-turn-helix domain HTH_27 PF13463.6 gi|15921370|ref|NP_377039.1| - 0.039 14.5 0.2 0.13 12.8 0.1 1.8 2 0 0 2 2 2 0 Winged helix DNA-binding domain HTH_23 PF13384.6 gi|15921370|ref|NP_377039.1| - 0.07 12.9 0.0 0.13 12.1 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain HTH_30 PF13556.6 gi|15921370|ref|NP_377039.1| - 0.087 12.6 0.0 0.16 11.8 0.0 1.4 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain TFIIE_alpha PF02002.17 gi|15921370|ref|NP_377039.1| - 0.096 12.6 0.8 0.22 11.4 0.3 1.8 2 0 0 2 2 2 0 TFIIE alpha subunit Aldedh PF00171.22 gi|15921371|ref|NP_377040.1| - 3.8e-144 480.7 0.0 4.6e-144 480.4 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family Syntaxin-6_N PF09177.11 gi|15921371|ref|NP_377040.1| - 0.11 13.1 0.8 0.41 11.2 0.8 2.0 1 1 0 1 1 1 0 Syntaxin 6, N-terminal LuxC PF05893.14 gi|15921371|ref|NP_377040.1| - 0.17 10.9 0.0 0.22 10.5 0.0 1.2 1 0 0 1 1 1 0 Acyl-CoA reductase (LuxC) SOAR PF16533.5 gi|15921371|ref|NP_377040.1| - 0.32 11.0 1.9 0.9 9.5 0.1 2.3 1 1 1 2 2 2 0 STIM1 Orai1-activating region Transp_cyt_pur PF02133.15 gi|15921372|ref|NP_377041.1| - 1.2e-64 218.7 49.4 1.5e-64 218.4 49.4 1.1 1 0 0 1 1 1 1 Permease for cytosine/purines, uracil, thiamine, allantoin Amidohydro_1 PF01979.20 gi|15921373|ref|NP_377042.1| - 4.2e-26 92.1 0.0 6.9e-26 91.4 0.0 1.3 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|15921373|ref|NP_377042.1| - 7.1e-15 55.4 0.1 3.7e-06 26.7 0.0 2.6 2 1 1 3 3 3 2 Amidohydrolase family Urease_alpha PF00449.20 gi|15921373|ref|NP_377042.1| - 0.029 14.7 0.3 0.083 13.2 0.3 1.8 1 0 0 1 1 1 0 Urease alpha-subunit, N-terminal domain DHO_dh PF01180.21 gi|15921375|ref|NP_377044.1| - 5.4e-36 124.3 0.0 6.6e-36 124.0 0.0 1.1 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase Dus PF01207.17 gi|15921375|ref|NP_377044.1| - 2.3e-13 49.9 0.0 2.3e-12 46.7 0.0 2.0 2 0 0 2 2 2 1 Dihydrouridine synthase (Dus) Peripla_BP_6 PF13458.6 gi|15921375|ref|NP_377044.1| - 0.04 13.6 0.1 0.054 13.2 0.1 1.2 1 0 0 1 1 1 0 Periplasmic binding protein CN_hydrolase PF00795.22 gi|15921376|ref|NP_377045.1| - 8.2e-54 182.7 0.0 9.3e-54 182.5 0.0 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase Transposase_20 PF02371.16 gi|15921377|ref|NP_377046.1| - 1.9e-27 95.4 0.0 3.8e-27 94.4 0.0 1.5 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family DEDD_Tnp_IS110 PF01548.17 gi|15921377|ref|NP_377046.1| - 2.6e-15 56.6 0.0 6.1e-15 55.4 0.0 1.6 1 1 0 1 1 1 1 Transposase PCMT PF01135.19 gi|15921379|ref|NP_377048.1| - 1.5e-38 132.7 0.0 1.8e-38 132.4 0.0 1.0 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) RrnaAD PF00398.20 gi|15921379|ref|NP_377048.1| - 2.5e-11 43.1 0.0 4e-11 42.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_25 PF13649.6 gi|15921379|ref|NP_377048.1| - 1.4e-06 28.9 0.0 2.5e-06 28.1 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|15921379|ref|NP_377048.1| - 0.00013 21.8 0.0 0.0002 21.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|15921379|ref|NP_377048.1| - 0.00028 20.9 0.0 0.00049 20.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|15921379|ref|NP_377048.1| - 0.00034 20.0 0.0 0.0006 19.2 0.0 1.5 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_11 PF08241.12 gi|15921379|ref|NP_377048.1| - 0.00034 21.2 0.0 0.00069 20.2 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|15921379|ref|NP_377048.1| - 0.0021 17.9 0.0 0.0026 17.6 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 gi|15921379|ref|NP_377048.1| - 0.004 16.9 0.0 0.008 16.0 0.0 1.4 2 0 0 2 2 2 1 Met-10+ like-protein DOT1 PF08123.13 gi|15921379|ref|NP_377048.1| - 0.0082 15.7 0.0 0.013 15.0 0.0 1.3 1 0 0 1 1 1 1 Histone methylation protein DOT1 Fibrillarin PF01269.17 gi|15921379|ref|NP_377048.1| - 0.0084 15.3 0.1 0.013 14.6 0.1 1.2 1 0 0 1 1 1 1 Fibrillarin MTS PF05175.14 gi|15921379|ref|NP_377048.1| - 0.02 14.5 0.0 0.032 13.8 0.0 1.4 1 1 0 1 1 1 0 Methyltransferase small domain CarD_CdnL_TRCF PF02559.16 gi|15921379|ref|NP_377048.1| - 0.071 13.8 0.1 9.4 7.0 0.0 2.4 2 0 0 2 2 2 0 CarD-like/TRCF domain DREV PF05219.12 gi|15921379|ref|NP_377048.1| - 0.071 12.2 0.0 0.12 11.4 0.0 1.3 1 0 0 1 1 1 0 DREV methyltransferase Ubie_methyltran PF01209.18 gi|15921379|ref|NP_377048.1| - 0.085 12.2 0.0 0.13 11.6 0.0 1.3 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Glyco_hydro_15 PF00723.21 gi|15921380|ref|NP_377049.1| - 7.4e-53 179.9 0.0 9.2e-49 166.4 0.0 2.1 1 1 1 2 2 2 2 Glycosyl hydrolases family 15 TPR_19 PF14559.6 gi|15921380|ref|NP_377049.1| - 0.0038 17.7 0.0 0.016 15.7 0.0 1.9 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_4 PF07721.14 gi|15921380|ref|NP_377049.1| - 0.012 16.2 0.0 0.078 13.6 0.0 2.2 2 0 0 2 2 2 0 Tetratricopeptide repeat PIN PF01850.21 gi|15921381|ref|NP_377050.1| - 1.2e-14 54.8 2.3 1.9e-14 54.2 2.3 1.3 1 1 0 1 1 1 1 PIN domain DUF5615 PF18480.1 gi|15921381|ref|NP_377050.1| - 0.00038 20.1 0.1 0.0035 17.1 0.1 2.2 1 1 1 2 2 2 1 Domain of unknown function (DUF5615) NYN PF01936.18 gi|15921381|ref|NP_377050.1| - 0.021 15.3 0.2 0.025 15.1 0.2 1.1 1 0 0 1 1 1 0 NYN domain VAPB_antitox PF02697.14 gi|15921382|ref|NP_377051.1| - 4.3e-22 78.7 9.3 5.1e-22 78.4 9.3 1.1 1 0 0 1 1 1 1 Putative antitoxin HU-DNA_bdg PF14848.6 gi|15921382|ref|NP_377051.1| - 0.022 14.8 0.2 0.032 14.2 0.1 1.3 1 1 0 1 1 1 0 DNA-binding domain DUF2680 PF10925.8 gi|15921382|ref|NP_377051.1| - 0.051 13.6 0.5 0.051 13.6 0.5 1.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2680) RHH_1 PF01402.21 gi|15921382|ref|NP_377051.1| - 0.089 12.8 4.3 0.49 10.4 0.1 2.6 2 2 0 2 2 2 0 Ribbon-helix-helix protein, copG family Sld5 PF05916.11 gi|15921382|ref|NP_377051.1| - 0.12 12.8 1.0 0.17 12.3 1.0 1.4 1 1 0 1 1 1 0 GINS complex protein SUV3_C PF12513.8 gi|15921382|ref|NP_377051.1| - 1.2 9.2 4.2 6.6 6.8 0.5 2.5 2 0 0 2 2 2 0 Mitochondrial degradasome RNA helicase subunit C terminal ATP-synt_ab_C PF00306.27 gi|15921383|ref|NP_377052.1| - 0.02 15.2 0.3 0.035 14.4 0.3 1.4 1 0 0 1 1 1 0 ATP synthase alpha/beta chain, C terminal domain SOR PF07682.11 gi|15921384|ref|NP_377053.1| - 2.7e-146 486.2 1.1 3.1e-146 486.0 1.1 1.0 1 0 0 1 1 1 1 Sulphur oxygenase reductase DUF515 PF04415.12 gi|15921385|ref|NP_377054.1| - 0.015 13.8 0.5 0.19 10.1 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF515) HTH_11 PF08279.12 gi|15921385|ref|NP_377054.1| - 0.17 11.8 0.1 0.53 10.3 0.1 1.8 1 0 0 1 1 1 0 HTH domain Hema_stalk PF08720.10 gi|15921385|ref|NP_377054.1| - 0.22 11.2 0.2 0.54 10.0 0.1 1.7 2 0 0 2 2 2 0 Influenza C hemagglutinin stalk NAD_binding_8 PF13450.6 gi|15921387|ref|NP_377056.1| - 2.9e-11 43.4 0.1 6.6e-11 42.3 0.1 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|15921387|ref|NP_377056.1| - 4.6e-11 42.9 0.1 3e-06 27.1 0.3 2.3 2 1 0 2 2 2 2 FAD dependent oxidoreductase Amino_oxidase PF01593.24 gi|15921387|ref|NP_377056.1| - 4.5e-10 39.4 0.0 1.6e-09 37.6 0.0 1.8 1 1 0 1 1 1 1 Flavin containing amine oxidoreductase Pyr_redox_2 PF07992.14 gi|15921387|ref|NP_377056.1| - 1.1e-09 38.0 0.1 1.4e-05 24.5 0.0 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|15921387|ref|NP_377056.1| - 1.1e-09 38.7 1.3 0.00026 21.5 0.1 2.5 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|15921387|ref|NP_377056.1| - 1.3e-09 37.6 0.3 8.1e-08 31.8 0.1 2.2 2 0 0 2 2 2 1 Thi4 family FAD_binding_2 PF00890.24 gi|15921387|ref|NP_377056.1| - 1.1e-08 34.7 1.3 3.4e-05 23.1 0.2 2.2 2 0 0 2 2 2 2 FAD binding domain HI0933_like PF03486.14 gi|15921387|ref|NP_377056.1| - 3.8e-08 32.4 0.9 9.5e-05 21.3 0.1 2.2 2 0 0 2 2 2 2 HI0933-like protein FAD_binding_3 PF01494.19 gi|15921387|ref|NP_377056.1| - 2.2e-06 27.2 0.1 5.6e-06 25.8 0.1 1.6 2 0 0 2 2 2 1 FAD binding domain FAD_oxidored PF12831.7 gi|15921387|ref|NP_377056.1| - 3.7e-06 26.6 0.6 0.00023 20.6 0.1 2.1 2 0 0 2 2 2 1 FAD dependent oxidoreductase GIDA PF01134.22 gi|15921387|ref|NP_377056.1| - 4.4e-06 26.0 0.4 0.0013 17.9 0.1 2.4 2 0 0 2 2 2 2 Glucose inhibited division protein A Lycopene_cycl PF05834.12 gi|15921387|ref|NP_377056.1| - 0.0009 18.4 0.4 0.0048 16.0 0.1 2.0 2 0 0 2 2 2 1 Lycopene cyclase protein GDI PF00996.18 gi|15921387|ref|NP_377056.1| - 0.002 16.8 0.6 0.33 9.4 0.1 2.2 2 0 0 2 2 2 2 GDP dissociation inhibitor GMC_oxred_N PF00732.19 gi|15921387|ref|NP_377056.1| - 0.0031 16.9 0.2 0.048 13.0 0.1 2.0 2 0 0 2 2 2 1 GMC oxidoreductase Trp_halogenase PF04820.14 gi|15921387|ref|NP_377056.1| - 0.014 14.3 1.0 0.21 10.4 0.1 2.3 2 0 0 2 2 2 0 Tryptophan halogenase IlvN PF07991.12 gi|15921387|ref|NP_377056.1| - 0.018 14.6 0.5 0.61 9.6 0.0 2.3 2 0 0 2 2 2 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_binding_9 PF13454.6 gi|15921387|ref|NP_377056.1| - 0.025 14.6 0.0 0.68 9.9 0.0 2.4 2 0 0 2 2 2 0 FAD-NAD(P)-binding 2-Hacid_dh_C PF02826.19 gi|15921387|ref|NP_377056.1| - 0.031 13.6 0.6 1.9 7.8 0.1 2.3 2 0 0 2 2 2 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|15921387|ref|NP_377056.1| - 0.038 14.3 0.4 0.13 12.5 0.0 2.0 2 0 0 2 2 2 0 TrkA-N domain UDPG_MGDP_dh_N PF03721.14 gi|15921387|ref|NP_377056.1| - 0.043 13.4 0.0 0.079 12.5 0.0 1.4 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain MCRA PF06100.11 gi|15921387|ref|NP_377056.1| - 0.058 12.2 0.8 3 6.5 0.2 2.1 2 0 0 2 2 2 0 MCRA family Pyr_redox_3 PF13738.6 gi|15921387|ref|NP_377056.1| - 0.074 12.3 1.8 0.11 11.7 0.4 1.9 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase Shikimate_DH PF01488.20 gi|15921387|ref|NP_377056.1| - 0.085 12.9 0.0 0.18 11.9 0.0 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase MFS_1 PF07690.16 gi|15921389|ref|NP_377058.1| - 9.6e-21 74.1 79.8 2.2e-19 69.6 39.3 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|15921389|ref|NP_377058.1| - 5.9e-16 58.4 32.6 2e-15 56.6 28.0 2.5 1 1 1 2 2 2 1 Sugar (and other) transporter PLU-1 PF08429.11 gi|15921390|ref|NP_377059.1| - 0.039 13.1 0.0 0.067 12.4 0.0 1.3 1 0 0 1 1 1 0 PLU-1-like protein MIase PF02426.16 gi|15921391|ref|NP_377060.1| - 4.4e-20 71.6 0.1 5.5e-20 71.3 0.1 1.0 1 0 0 1 1 1 1 Muconolactone delta-isomerase GYD PF08734.11 gi|15921391|ref|NP_377060.1| - 0.012 15.5 0.0 0.015 15.2 0.0 1.2 1 0 0 1 1 1 0 GYD domain Unstab_antitox PF09720.10 gi|15921391|ref|NP_377060.1| - 0.018 15.1 0.0 0.037 14.1 0.0 1.5 1 0 0 1 1 1 0 Putative addiction module component AsnC_trans_reg PF01037.21 gi|15921391|ref|NP_377060.1| - 0.041 13.9 0.0 0.073 13.1 0.0 1.5 1 1 0 1 1 1 0 Lrp/AsnC ligand binding domain RNase_P_Rpp14 PF01900.19 gi|15921391|ref|NP_377060.1| - 0.065 13.5 0.0 0.084 13.1 0.0 1.1 1 0 0 1 1 1 0 Rpp14/Pop5 family CbiQ PF02361.16 gi|15921392|ref|NP_377061.1| - 9.6e-12 45.0 15.6 9.6e-12 45.0 15.6 1.4 2 0 0 2 2 2 1 Cobalt transport protein DoxX PF07681.12 gi|15921392|ref|NP_377061.1| - 0.018 15.6 1.4 0.039 14.5 0.2 2.3 2 1 0 2 2 2 0 DoxX ABC_tran PF00005.27 gi|15921393|ref|NP_377062.1| - 4.1e-49 166.6 0.2 3.6e-23 82.6 0.1 2.3 2 0 0 2 2 2 2 ABC transporter SMC_N PF02463.19 gi|15921393|ref|NP_377062.1| - 4.2e-13 49.2 4.0 3.5e-05 23.3 0.0 3.7 2 2 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|15921393|ref|NP_377062.1| - 8e-13 47.9 1.0 3.4e-05 23.5 0.1 2.5 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_21 PF13304.6 gi|15921393|ref|NP_377062.1| - 3e-12 47.0 12.4 5.7e-06 26.4 0.6 4.4 2 2 2 4 4 4 3 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|15921393|ref|NP_377062.1| - 3.8e-12 47.1 3.4 1.2e-06 29.2 0.6 2.8 2 2 0 2 2 2 2 AAA domain AAA_15 PF13175.6 gi|15921393|ref|NP_377062.1| - 1e-10 41.9 0.1 2.3e-07 30.9 0.1 2.3 2 1 0 2 2 2 2 AAA ATPase domain RsgA_GTPase PF03193.16 gi|15921393|ref|NP_377062.1| - 1.2e-09 38.3 0.6 0.00041 20.3 0.0 2.5 2 0 0 2 2 2 2 RsgA GTPase AAA_22 PF13401.6 gi|15921393|ref|NP_377062.1| - 1.1e-07 32.2 0.0 0.012 15.9 0.0 2.6 2 1 0 2 2 2 2 AAA domain AAA_16 PF13191.6 gi|15921393|ref|NP_377062.1| - 6.9e-07 29.8 0.0 0.0063 16.9 0.0 2.4 2 0 0 2 2 2 2 AAA ATPase domain NACHT PF05729.12 gi|15921393|ref|NP_377062.1| - 1.7e-06 28.0 0.2 0.043 13.7 0.0 2.4 2 0 0 2 2 2 2 NACHT domain ABC_ATPase PF09818.9 gi|15921393|ref|NP_377062.1| - 2.4e-06 26.6 0.4 0.044 12.6 0.3 2.7 3 0 0 3 3 3 2 Predicted ATPase of the ABC class T2SSE PF00437.20 gi|15921393|ref|NP_377062.1| - 3e-06 26.5 0.1 0.00053 19.1 0.1 2.3 2 0 0 2 2 2 1 Type II/IV secretion system protein MMR_HSR1 PF01926.23 gi|15921393|ref|NP_377062.1| - 8.6e-06 25.8 0.9 0.046 13.8 0.1 2.8 2 0 0 2 2 2 2 50S ribosome-binding GTPase G-alpha PF00503.20 gi|15921393|ref|NP_377062.1| - 1.8e-05 24.1 1.0 0.0018 17.5 0.2 2.2 2 0 0 2 2 2 1 G-protein alpha subunit Mg_chelatase PF01078.21 gi|15921393|ref|NP_377062.1| - 2.7e-05 23.6 0.7 0.15 11.5 0.0 3.0 3 0 0 3 3 3 2 Magnesium chelatase, subunit ChlI AAA_24 PF13479.6 gi|15921393|ref|NP_377062.1| - 2.8e-05 23.9 0.1 0.1 12.3 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_25 PF13481.6 gi|15921393|ref|NP_377062.1| - 4.8e-05 23.0 0.0 0.37 10.4 0.0 2.4 2 0 0 2 2 2 2 AAA domain AAA_18 PF13238.6 gi|15921393|ref|NP_377062.1| - 6.1e-05 23.6 0.1 0.33 11.5 0.1 2.7 2 0 0 2 2 2 2 AAA domain MCM PF00493.23 gi|15921393|ref|NP_377062.1| - 0.00014 21.0 0.1 0.27 10.3 0.1 2.4 2 0 0 2 2 2 2 MCM P-loop domain AAA_30 PF13604.6 gi|15921393|ref|NP_377062.1| - 0.00015 21.6 0.1 0.39 10.4 0.0 2.4 2 1 0 2 2 2 2 AAA domain FtsK_SpoIIIE PF01580.18 gi|15921393|ref|NP_377062.1| - 0.00035 20.0 0.8 0.061 12.7 0.1 2.3 2 0 0 2 2 2 1 FtsK/SpoIIIE family NB-ARC PF00931.22 gi|15921393|ref|NP_377062.1| - 0.00056 19.2 0.1 0.42 9.8 0.0 2.3 2 0 0 2 2 2 2 NB-ARC domain Dynamin_N PF00350.23 gi|15921393|ref|NP_377062.1| - 0.00093 19.3 2.9 0.87 9.6 0.1 2.7 3 0 0 3 3 2 2 Dynamin family DUF815 PF05673.13 gi|15921393|ref|NP_377062.1| - 0.0012 18.0 0.1 1 8.5 0.0 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF815) RNA_helicase PF00910.22 gi|15921393|ref|NP_377062.1| - 0.0014 19.0 0.1 0.98 9.8 0.0 2.5 2 0 0 2 2 2 1 RNA helicase Rad17 PF03215.15 gi|15921393|ref|NP_377062.1| - 0.0016 18.4 0.0 0.78 9.6 0.0 2.5 2 0 0 2 2 2 1 Rad17 P-loop domain ATPase_2 PF01637.18 gi|15921393|ref|NP_377062.1| - 0.0016 18.4 1.0 0.062 13.2 0.1 2.4 2 0 0 2 2 2 1 ATPase domain predominantly from Archaea AAA_33 PF13671.6 gi|15921393|ref|NP_377062.1| - 0.0019 18.4 0.0 3.3 7.9 0.0 2.5 2 0 0 2 2 2 0 AAA domain DUF2813 PF11398.8 gi|15921393|ref|NP_377062.1| - 0.0022 17.3 0.2 0.0049 16.2 0.0 1.6 2 0 0 2 2 1 1 Protein of unknown function (DUF2813) AAA_5 PF07728.14 gi|15921393|ref|NP_377062.1| - 0.0026 17.8 0.2 2.3 8.2 0.1 2.8 3 0 0 3 3 2 1 AAA domain (dynein-related subfamily) Zeta_toxin PF06414.12 gi|15921393|ref|NP_377062.1| - 0.003 16.9 0.1 0.24 10.7 0.0 2.4 2 0 0 2 2 2 1 Zeta toxin Septin PF00735.18 gi|15921393|ref|NP_377062.1| - 0.0031 16.9 0.1 0.11 11.8 0.0 2.3 2 0 0 2 2 2 1 Septin AAA PF00004.29 gi|15921393|ref|NP_377062.1| - 0.0039 17.6 0.2 0.58 10.6 0.1 3.0 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_28 PF13521.6 gi|15921393|ref|NP_377062.1| - 0.0076 16.5 0.1 2.5 8.3 0.0 2.5 2 0 0 2 2 2 1 AAA domain AAA_7 PF12775.7 gi|15921393|ref|NP_377062.1| - 0.0079 15.7 0.1 0.87 9.1 0.0 2.5 2 0 0 2 2 2 1 P-loop containing dynein motor region FeoB_N PF02421.18 gi|15921393|ref|NP_377062.1| - 0.008 15.7 0.1 4.8 6.7 0.1 2.4 2 0 0 2 2 2 0 Ferrous iron transport protein B cobW PF02492.19 gi|15921393|ref|NP_377062.1| - 0.0085 15.7 0.4 1.5 8.4 0.0 2.7 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain ATP_bind_1 PF03029.17 gi|15921393|ref|NP_377062.1| - 0.0091 15.8 0.0 4.4 7.0 0.0 2.4 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein Roc PF08477.13 gi|15921393|ref|NP_377062.1| - 0.011 16.0 0.7 4.6 7.5 0.1 2.5 2 0 0 2 2 2 0 Ras of Complex, Roc, domain of DAPkinase PduV-EutP PF10662.9 gi|15921393|ref|NP_377062.1| - 0.011 15.5 0.1 5.2 6.8 0.0 2.5 2 0 0 2 2 2 0 Ethanolamine utilisation - propanediol utilisation PRK PF00485.18 gi|15921393|ref|NP_377062.1| - 0.012 15.4 0.2 0.56 9.9 0.1 2.3 2 0 0 2 2 2 0 Phosphoribulokinase / Uridine kinase family TsaE PF02367.17 gi|15921393|ref|NP_377062.1| - 0.017 15.1 0.1 4.8 7.2 0.1 2.4 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE DLIC PF05783.11 gi|15921393|ref|NP_377062.1| - 0.026 13.4 0.2 1.8 7.3 0.0 2.1 2 0 0 2 2 2 0 Dynein light intermediate chain (DLIC) IstB_IS21 PF01695.17 gi|15921393|ref|NP_377062.1| - 0.035 13.8 0.4 14 5.4 0.0 3.1 3 0 0 3 3 3 0 IstB-like ATP binding protein NTPase_1 PF03266.15 gi|15921393|ref|NP_377062.1| - 0.038 13.9 2.5 1.3 8.9 0.1 2.8 3 0 0 3 3 2 0 NTPase AAA_27 PF13514.6 gi|15921393|ref|NP_377062.1| - 0.05 13.2 0.2 2.7 7.6 0.0 2.4 2 0 0 2 2 2 0 AAA domain IIGP PF05049.13 gi|15921393|ref|NP_377062.1| - 0.053 12.6 0.9 2.1 7.3 0.1 2.4 2 0 0 2 2 2 0 Interferon-inducible GTPase (IIGP) Ploopntkinase3 PF18751.1 gi|15921393|ref|NP_377062.1| - 0.061 13.2 0.1 13 5.7 0.0 2.3 2 0 0 2 2 2 0 P-loop Nucleotide Kinase3 PIF1 PF05970.14 gi|15921393|ref|NP_377062.1| - 0.062 12.4 0.0 0.39 9.8 0.0 2.0 2 0 0 2 2 2 0 PIF1-like helicase MobB PF03205.14 gi|15921393|ref|NP_377062.1| - 0.072 13.0 0.4 9.4 6.1 0.1 2.4 2 0 0 2 2 2 0 Molybdopterin guanine dinucleotide synthesis protein B KAP_NTPase PF07693.14 gi|15921393|ref|NP_377062.1| - 0.078 12.2 0.5 0.5 9.6 0.0 2.1 2 0 0 2 2 2 0 KAP family P-loop domain AAA_19 PF13245.6 gi|15921393|ref|NP_377062.1| - 0.087 13.2 1.3 11 6.3 0.2 2.7 2 1 0 2 2 2 0 AAA domain dNK PF01712.19 gi|15921393|ref|NP_377062.1| - 0.12 12.2 0.8 7.8 6.3 0.1 2.4 2 0 0 2 2 2 0 Deoxynucleoside kinase APS_kinase PF01583.20 gi|15921393|ref|NP_377062.1| - 0.12 12.3 0.1 1.5 8.7 0.0 2.3 2 0 0 2 2 2 0 Adenylylsulphate kinase Viral_helicase1 PF01443.18 gi|15921393|ref|NP_377062.1| - 0.18 11.5 0.1 9.5 5.9 0.0 2.4 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase AIG1 PF04548.16 gi|15921393|ref|NP_377062.1| - 0.2 10.9 1.2 0.26 10.6 0.1 1.8 2 0 0 2 2 1 0 AIG1 family DUF87 PF01935.17 gi|15921393|ref|NP_377062.1| - 0.33 11.0 4.9 12 5.9 0.1 3.2 3 0 0 3 3 3 0 Helicase HerA, central domain Pox_A32 PF04665.12 gi|15921393|ref|NP_377062.1| - 0.69 9.3 4.1 11 5.4 0.0 2.6 3 0 0 3 3 2 0 Poxvirus A32 protein CbiA PF01656.23 gi|15921393|ref|NP_377062.1| - 2.2 8.3 4.9 8.5 6.4 0.4 3.0 3 0 0 3 3 3 0 CobQ/CobB/MinD/ParA nucleotide binding domain Peptidase_A8 PF01252.18 gi|15921394|ref|NP_377063.1| - 2.5 8.3 9.5 2.1 8.6 5.5 2.2 1 1 1 2 2 2 0 Signal peptidase (SPase) II Lactonase PF10282.9 gi|15921395|ref|NP_377064.1| - 0.019 14.2 0.1 0.18 11.1 0.0 2.1 2 0 0 2 2 2 0 Lactonase, 7-bladed beta-propeller Arylesterase PF01731.20 gi|15921395|ref|NP_377064.1| - 0.023 14.9 4.7 0.05 13.8 0.4 2.7 2 0 0 2 2 2 0 Arylesterase FlgD_ig PF13860.6 gi|15921395|ref|NP_377064.1| - 0.078 12.8 0.0 0.25 11.2 0.0 1.9 2 0 0 2 2 2 0 FlgD Ig-like domain LTD PF00932.19 gi|15921395|ref|NP_377064.1| - 0.083 13.2 1.4 12 6.2 0.0 3.2 3 1 0 3 3 3 0 Lamin Tail Domain SKG6 PF08693.10 gi|15921395|ref|NP_377064.1| - 0.24 10.8 7.0 0.55 9.7 7.0 1.6 1 0 0 1 1 1 0 Transmembrane alpha-helix domain HTH_23 PF13384.6 gi|15921396|ref|NP_377065.1| - 4.5e-08 32.7 0.1 8.8e-08 31.7 0.1 1.6 1 0 0 1 1 1 1 Homeodomain-like domain Zn_Tnp_IS1 PF03811.13 gi|15921396|ref|NP_377065.1| - 1.2e-05 24.9 7.7 3.2e-05 23.5 7.7 1.7 1 0 0 1 1 1 1 InsA N-terminal domain Terminase_5 PF06056.12 gi|15921396|ref|NP_377065.1| - 1.7e-05 24.6 0.1 3.7e-05 23.5 0.1 1.6 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) HTH_28 PF13518.6 gi|15921396|ref|NP_377065.1| - 3.6e-05 23.8 0.0 8.6e-05 22.6 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_38 PF13936.6 gi|15921396|ref|NP_377065.1| - 9e-05 22.2 0.0 0.0002 21.1 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|15921396|ref|NP_377065.1| - 0.00045 19.8 0.0 0.00086 18.9 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_Tnp_1 PF01527.20 gi|15921396|ref|NP_377065.1| - 0.0015 18.8 0.1 0.0035 17.6 0.1 1.5 1 0 0 1 1 1 1 Transposase zf-ribbon_3 PF13248.6 gi|15921396|ref|NP_377065.1| - 0.0018 17.6 2.1 0.92 9.0 0.1 2.3 2 0 0 2 2 2 2 zinc-ribbon domain HTH_Tnp_ISL3 PF13542.6 gi|15921396|ref|NP_377065.1| - 0.0063 15.9 0.0 0.015 14.7 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_29 PF13551.6 gi|15921396|ref|NP_377065.1| - 0.022 14.8 0.0 0.039 14.0 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix OrfB_Zn_ribbon PF07282.11 gi|15921396|ref|NP_377065.1| - 0.032 14.2 1.4 0.087 12.8 1.4 1.7 1 0 0 1 1 1 0 Putative transposase DNA-binding domain HTH_40 PF14493.6 gi|15921396|ref|NP_377065.1| - 0.045 14.2 0.0 0.09 13.2 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Zn_Tnp_IS1595 PF12760.7 gi|15921396|ref|NP_377065.1| - 0.049 13.6 5.0 0.094 12.7 5.0 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain HTH_Tnp_IS630 PF01710.16 gi|15921396|ref|NP_377065.1| - 0.05 13.7 0.1 0.13 12.3 0.1 1.7 1 0 0 1 1 1 0 Transposase GerE PF00196.19 gi|15921396|ref|NP_377065.1| - 0.078 12.5 0.0 0.15 11.6 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family DUF1804 PF08822.11 gi|15921396|ref|NP_377065.1| - 0.084 12.8 0.2 0.33 10.9 0.2 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1804) Zn-ribbon_8 PF09723.10 gi|15921396|ref|NP_377065.1| - 0.22 11.7 4.7 1.4 9.1 0.6 2.5 2 0 0 2 2 2 0 Zinc ribbon domain RNA_POL_M_15KD PF02150.16 gi|15921396|ref|NP_377065.1| - 0.26 11.2 1.0 0.69 9.8 1.0 1.7 1 0 0 1 1 1 0 RNA polymerases M/15 Kd subunit zf-ISL3 PF14690.6 gi|15921396|ref|NP_377065.1| - 0.8 10.4 7.6 17 6.2 2.8 2.9 2 0 0 2 2 2 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 Nudix_N_2 PF14803.6 gi|15921396|ref|NP_377065.1| - 0.95 9.4 5.5 2.1 8.3 5.5 1.6 1 0 0 1 1 1 0 Nudix N-terminal Lar_restr_allev PF14354.6 gi|15921396|ref|NP_377065.1| - 1.3 9.4 5.1 0.41 11.0 1.1 2.1 2 0 0 2 2 2 0 Restriction alleviation protein Lar DUF364 PF04016.12 gi|15921397|ref|NP_377066.1| - 8.1e-44 148.8 0.0 1.2e-43 148.2 0.0 1.2 1 0 0 1 1 1 1 Putative heavy-metal chelation DUF4213 PF13938.6 gi|15921397|ref|NP_377066.1| - 6.4e-22 77.6 0.0 2.9e-21 75.5 0.0 2.0 2 0 0 2 2 2 1 Putative heavy-metal chelation HEPN PF05168.14 gi|15921398|ref|NP_377067.1| - 9.3e-32 109.6 1.2 1e-31 109.5 1.2 1.0 1 0 0 1 1 1 1 HEPN domain NICE-3 PF07406.11 gi|15921398|ref|NP_377067.1| - 0.041 13.9 0.2 0.069 13.1 0.1 1.3 1 1 0 1 1 1 0 NICE-3 protein Polbeta PF18765.1 gi|15921399|ref|NP_377068.1| - 8.3e-08 32.2 0.2 1.2e-07 31.7 0.2 1.2 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase NTP_transf_2 PF01909.23 gi|15921399|ref|NP_377068.1| - 1.4e-07 31.7 0.0 1.8e-07 31.3 0.0 1.3 1 0 0 1 1 1 1 Nucleotidyltransferase domain VirC1 PF07015.11 gi|15921399|ref|NP_377068.1| - 0.16 11.2 0.0 0.18 11.1 0.0 1.1 1 0 0 1 1 1 0 VirC1 protein AAA_14 PF13173.6 gi|15921400|ref|NP_377069.1| - 1.3e-22 80.2 0.4 5.9e-22 78.1 0.1 2.1 2 0 0 2 2 2 1 AAA domain DUF4143 PF13635.6 gi|15921400|ref|NP_377069.1| - 4.6e-06 26.8 0.5 7.2e-06 26.2 0.5 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4143) ATPase_2 PF01637.18 gi|15921400|ref|NP_377069.1| - 5.9e-06 26.4 2.3 5.9e-06 26.4 2.3 3.1 1 1 2 3 3 3 2 ATPase domain predominantly from Archaea AAA PF00004.29 gi|15921400|ref|NP_377069.1| - 0.00036 21.0 0.1 0.00094 19.6 0.1 1.6 1 0 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 gi|15921400|ref|NP_377069.1| - 0.00098 18.9 0.3 0.0018 18.1 0.3 1.5 1 0 0 1 1 1 1 AAA domain RNA_helicase PF00910.22 gi|15921400|ref|NP_377069.1| - 0.033 14.6 0.9 0.19 12.2 0.0 2.6 2 0 0 2 2 2 0 RNA helicase DUF4256 PF14066.6 gi|15921400|ref|NP_377069.1| - 0.088 12.5 0.0 0.19 11.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF4256) HTH_Tnp_ISL3 PF13542.6 gi|15921400|ref|NP_377069.1| - 0.16 11.4 0.0 0.28 10.6 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 AAA_21 PF13304.6 gi|15921401|ref|NP_377070.1| - 1.1e-07 32.0 0.7 1.9e-07 31.2 0.7 1.5 1 1 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|15921401|ref|NP_377070.1| - 0.0035 17.1 1.4 0.0035 17.1 1.4 2.0 1 1 0 2 2 2 1 AAA ATPase domain YpjP PF14005.6 gi|15921401|ref|NP_377070.1| - 0.07 13.2 0.3 3.7 7.6 0.0 2.4 2 0 0 2 2 2 0 YpjP-like protein SMC_N PF02463.19 gi|15921401|ref|NP_377070.1| - 0.11 11.9 0.7 0.66 9.4 0.3 2.1 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|15921402|ref|NP_377071.1| - 1.5e-30 107.2 3.9 2.2e-30 106.6 3.9 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA_21 PF13304.6 gi|15921402|ref|NP_377071.1| - 2.7e-15 57.0 4.3 2.2e-08 34.3 0.3 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|15921402|ref|NP_377071.1| - 0.00028 21.5 6.1 0.00072 20.1 6.1 2.0 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|15921402|ref|NP_377071.1| - 0.018 14.8 0.0 0.038 13.7 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain ABC_tran PF00005.27 gi|15921402|ref|NP_377071.1| - 0.047 14.2 0.0 0.16 12.5 0.0 1.9 2 0 0 2 2 2 0 ABC transporter AAA_27 PF13514.6 gi|15921402|ref|NP_377071.1| - 0.053 13.1 0.0 0.14 11.7 0.0 1.7 2 0 0 2 2 2 0 AAA domain DUF3991 PF13154.6 gi|15921402|ref|NP_377071.1| - 0.11 12.9 0.0 0.22 11.9 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3991) Fic PF02661.18 gi|15921403|ref|NP_377072.1| - 3.5e-08 34.2 0.2 1.1e-07 32.7 0.0 2.0 2 1 0 2 2 2 1 Fic/DOC family AAA_21 PF13304.6 gi|15921404|ref|NP_377073.1| - 6.2e-37 128.0 1.1 7.4e-37 127.8 1.1 1.1 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|15921404|ref|NP_377073.1| - 2.6e-22 80.1 10.7 2e-12 47.5 6.4 3.0 2 1 0 2 2 2 2 AAA ATPase domain SMC_N PF02463.19 gi|15921404|ref|NP_377073.1| - 1.2e-12 47.8 1.2 2.2e-08 33.8 0.2 2.3 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|15921404|ref|NP_377073.1| - 6.7e-10 39.8 2.0 7.3e-10 39.7 1.0 1.7 2 1 0 2 2 1 1 AAA domain ABC_tran PF00005.27 gi|15921404|ref|NP_377073.1| - 6.7e-06 26.7 0.4 0.0019 18.7 0.3 2.4 2 0 0 2 2 2 1 ABC transporter AAA_22 PF13401.6 gi|15921404|ref|NP_377073.1| - 7.3e-05 23.1 0.0 0.58 10.4 0.0 2.3 2 0 0 2 2 2 2 AAA domain AAA PF00004.29 gi|15921404|ref|NP_377073.1| - 0.0007 20.0 0.0 1.3 9.4 0.0 2.3 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_29 PF13555.6 gi|15921404|ref|NP_377073.1| - 0.0018 18.0 0.0 0.0034 17.1 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_16 PF13191.6 gi|15921404|ref|NP_377073.1| - 0.047 14.1 0.0 0.084 13.2 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain ATPase_2 PF01637.18 gi|15921404|ref|NP_377073.1| - 0.074 13.0 3.2 0.36 10.7 0.2 2.5 2 1 0 2 2 2 0 ATPase domain predominantly from Archaea AAA_13 PF13166.6 gi|15921404|ref|NP_377073.1| - 0.074 11.7 0.0 0.11 11.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain TniB PF05621.11 gi|15921404|ref|NP_377073.1| - 0.074 12.4 0.5 3.2 7.1 0.1 2.2 2 0 0 2 2 2 0 Bacterial TniB protein AAA_5 PF07728.14 gi|15921404|ref|NP_377073.1| - 0.077 13.0 0.1 2 8.4 0.0 2.3 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) AAA_7 PF12775.7 gi|15921404|ref|NP_377073.1| - 0.13 11.8 0.0 0.22 11.0 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region DUF2813 PF11398.8 gi|15921404|ref|NP_377073.1| - 0.15 11.3 2.0 0.76 9.0 0.4 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF2813) cobW PF02492.19 gi|15921404|ref|NP_377073.1| - 0.16 11.5 0.5 0.32 10.6 0.1 1.7 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain RsgA_GTPase PF03193.16 gi|15921404|ref|NP_377073.1| - 0.2 11.5 0.7 0.52 10.2 0.1 1.9 2 0 0 2 2 2 0 RsgA GTPase p450 PF00067.22 gi|15921406|ref|NP_377075.1| - 6.5e-24 84.5 0.3 1.4e-21 76.8 0.0 2.9 3 0 0 3 3 3 3 Cytochrome P450 DUF1028 PF06267.12 gi|15921407|ref|NP_377076.1| - 2.4e-70 236.3 0.0 3e-70 236.0 0.0 1.1 1 0 0 1 1 1 1 Family of unknown function (DUF1028) PG_binding_2 PF08823.11 gi|15921407|ref|NP_377076.1| - 2.7e-12 46.8 0.5 1e-11 45.0 0.5 2.0 1 0 0 1 1 1 1 Putative peptidoglycan binding domain ELMO_CED12 PF04727.13 gi|15921407|ref|NP_377076.1| - 0.16 12.0 0.0 0.3 11.2 0.0 1.3 1 0 0 1 1 1 0 ELMO/CED-12 family AAA_5 PF07728.14 gi|15921409|ref|NP_377078.1| - 1.7e-14 54.0 0.0 4.3e-13 49.4 0.0 2.2 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|15921409|ref|NP_377078.1| - 3.3e-07 30.8 0.1 4.6e-06 27.1 0.0 2.4 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|15921409|ref|NP_377078.1| - 8.7e-05 23.0 0.1 0.00034 21.0 0.1 1.9 1 1 1 2 2 2 1 AAA ATPase domain AAA_22 PF13401.6 gi|15921409|ref|NP_377078.1| - 0.00061 20.1 0.0 0.025 14.9 0.0 2.8 4 0 0 4 4 2 1 AAA domain Mg_chelatase PF01078.21 gi|15921409|ref|NP_377078.1| - 0.00084 18.8 0.0 0.0014 18.0 0.0 1.3 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_18 PF13238.6 gi|15921409|ref|NP_377078.1| - 0.0011 19.6 0.0 0.0011 19.6 0.0 3.1 4 0 0 4 4 4 1 AAA domain AAA_33 PF13671.6 gi|15921409|ref|NP_377078.1| - 0.0018 18.5 0.0 0.0035 17.5 0.0 1.5 1 0 0 1 1 1 1 AAA domain TIP49 PF06068.13 gi|15921409|ref|NP_377078.1| - 0.0022 17.3 0.0 0.0044 16.3 0.0 1.4 1 0 0 1 1 1 1 TIP49 P-loop domain IstB_IS21 PF01695.17 gi|15921409|ref|NP_377078.1| - 0.0023 17.7 0.1 0.0062 16.3 0.0 1.6 2 0 0 2 2 1 1 IstB-like ATP binding protein AAA_19 PF13245.6 gi|15921409|ref|NP_377078.1| - 0.0038 17.6 0.0 0.055 13.8 0.0 2.3 2 0 0 2 2 2 1 AAA domain RuvB_N PF05496.12 gi|15921409|ref|NP_377078.1| - 0.0047 16.7 0.1 0.012 15.3 0.0 1.6 2 0 0 2 2 1 1 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 gi|15921409|ref|NP_377078.1| - 0.005 16.9 0.0 0.05 13.6 0.0 2.8 2 2 1 3 3 3 1 AAA domain AAA_7 PF12775.7 gi|15921409|ref|NP_377078.1| - 0.0051 16.3 0.0 0.013 15.0 0.0 1.6 1 0 0 1 1 1 1 P-loop containing dynein motor region AAA_11 PF13086.6 gi|15921409|ref|NP_377078.1| - 0.0056 16.5 0.1 0.012 15.5 0.1 1.8 1 1 0 1 1 1 1 AAA domain AAA_25 PF13481.6 gi|15921409|ref|NP_377078.1| - 0.015 14.9 0.0 0.028 14.0 0.0 1.4 1 0 0 1 1 1 0 AAA domain PhoH PF02562.16 gi|15921409|ref|NP_377078.1| - 0.027 13.9 0.0 0.052 13.0 0.0 1.4 1 0 0 1 1 1 0 PhoH-like protein AAA_30 PF13604.6 gi|15921409|ref|NP_377078.1| - 0.042 13.6 0.0 0.093 12.4 0.0 1.5 1 1 0 1 1 1 0 AAA domain AAA_3 PF07726.11 gi|15921409|ref|NP_377078.1| - 0.046 13.6 0.1 3.8 7.4 0.1 2.9 2 1 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) AAA_24 PF13479.6 gi|15921409|ref|NP_377078.1| - 0.057 13.1 0.0 0.2 11.4 0.0 1.9 1 0 0 1 1 1 0 AAA domain RNA_helicase PF00910.22 gi|15921409|ref|NP_377078.1| - 0.11 12.9 0.0 0.34 11.3 0.0 2.0 1 1 0 1 1 1 0 RNA helicase Phage_holin_6_1 PF09682.10 gi|15921409|ref|NP_377078.1| - 0.13 12.7 0.1 0.35 11.3 0.1 1.7 1 0 0 1 1 1 0 Bacteriophage holin of superfamily 6 (Holin_LLH) ResIII PF04851.15 gi|15921409|ref|NP_377078.1| - 0.16 12.0 0.0 0.89 9.5 0.0 2.4 3 0 0 3 3 2 0 Type III restriction enzyme, res subunit Zeta_toxin PF06414.12 gi|15921409|ref|NP_377078.1| - 0.17 11.1 0.0 0.66 9.2 0.0 1.8 2 0 0 2 2 2 0 Zeta toxin NACHT PF05729.12 gi|15921409|ref|NP_377078.1| - 0.17 11.8 0.0 0.35 10.8 0.0 1.5 1 0 0 1 1 1 0 NACHT domain AAA_5 PF07728.14 gi|15921411|ref|NP_377080.1| - 4.2e-12 46.2 0.0 3.2e-11 43.4 0.0 2.4 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) AAA PF00004.29 gi|15921411|ref|NP_377080.1| - 4.1e-06 27.2 0.1 3.1e-05 24.4 0.0 2.6 2 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_19 PF13245.6 gi|15921411|ref|NP_377080.1| - 0.00074 19.9 0.4 0.093 13.1 0.1 3.2 3 0 0 3 3 3 1 AAA domain AAA_33 PF13671.6 gi|15921411|ref|NP_377080.1| - 0.00077 19.6 0.1 0.0025 18.0 0.0 1.9 2 0 0 2 2 2 1 AAA domain AAA_16 PF13191.6 gi|15921411|ref|NP_377080.1| - 0.00091 19.7 0.2 0.0055 17.1 0.0 2.4 2 1 0 2 2 2 1 AAA ATPase domain PhoH PF02562.16 gi|15921411|ref|NP_377080.1| - 0.0016 17.9 0.0 0.005 16.3 0.0 1.9 2 0 0 2 2 2 1 PhoH-like protein RuvB_N PF05496.12 gi|15921411|ref|NP_377080.1| - 0.0043 16.8 0.0 0.01 15.6 0.0 1.6 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain IstB_IS21 PF01695.17 gi|15921411|ref|NP_377080.1| - 0.0045 16.7 0.7 0.013 15.2 0.1 2.1 2 1 0 2 2 2 1 IstB-like ATP binding protein Mg_chelatase PF01078.21 gi|15921411|ref|NP_377080.1| - 0.0045 16.4 0.0 0.0078 15.6 0.0 1.3 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI AAA_28 PF13521.6 gi|15921411|ref|NP_377080.1| - 0.0054 17.0 0.0 0.016 15.4 0.0 1.9 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|15921411|ref|NP_377080.1| - 0.011 16.0 0.5 0.13 12.5 0.1 3.0 2 1 0 2 2 2 0 AAA domain DUF2312 PF10073.9 gi|15921411|ref|NP_377080.1| - 0.015 14.9 0.7 0.015 14.9 0.7 3.3 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2312) AAA_11 PF13086.6 gi|15921411|ref|NP_377080.1| - 0.016 15.0 0.4 0.049 13.4 0.0 2.0 2 0 0 2 2 2 0 AAA domain TIP49 PF06068.13 gi|15921411|ref|NP_377080.1| - 0.017 14.3 0.0 0.036 13.3 0.0 1.5 1 0 0 1 1 1 0 TIP49 P-loop domain AAA_30 PF13604.6 gi|15921411|ref|NP_377080.1| - 0.018 14.7 0.0 0.05 13.3 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 gi|15921411|ref|NP_377080.1| - 0.021 14.4 0.0 0.067 12.8 0.0 1.8 2 0 0 2 2 2 0 AAA domain AAA_18 PF13238.6 gi|15921411|ref|NP_377080.1| - 0.025 15.1 0.0 0.1 13.1 0.0 2.2 1 0 0 1 1 1 0 AAA domain AAA_7 PF12775.7 gi|15921411|ref|NP_377080.1| - 0.038 13.5 0.0 0.1 12.1 0.0 1.8 1 0 0 1 1 1 0 P-loop containing dynein motor region AAA_24 PF13479.6 gi|15921411|ref|NP_377080.1| - 0.04 13.6 0.3 0.28 10.9 0.3 2.4 1 1 0 1 1 1 0 AAA domain Parvo_NS1 PF01057.17 gi|15921411|ref|NP_377080.1| - 0.073 12.2 0.0 0.15 11.1 0.0 1.5 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 ResIII PF04851.15 gi|15921411|ref|NP_377080.1| - 0.074 13.1 0.0 0.47 10.4 0.0 2.3 2 0 0 2 2 2 0 Type III restriction enzyme, res subunit NACHT PF05729.12 gi|15921411|ref|NP_377080.1| - 0.11 12.4 0.0 0.29 11.0 0.0 1.6 1 0 0 1 1 1 0 NACHT domain AAA_29 PF13555.6 gi|15921411|ref|NP_377080.1| - 0.15 11.8 0.1 0.39 10.5 0.1 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain DDE_Tnp_IS1 PF03400.13 gi|15921412|ref|NP_377081.1| - 6e-05 23.4 2.1 8.7e-05 22.9 2.1 1.2 1 0 0 1 1 1 1 IS1 transposase HTH_23 PF13384.6 gi|15921414|ref|NP_377083.1| - 1.5e-08 34.2 0.0 2.1e-08 33.7 0.0 1.2 1 0 0 1 1 1 1 Homeodomain-like domain Terminase_5 PF06056.12 gi|15921414|ref|NP_377083.1| - 5.4e-06 26.2 0.0 7e-06 25.8 0.0 1.2 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) HTH_38 PF13936.6 gi|15921414|ref|NP_377083.1| - 2.1e-05 24.2 0.0 3.4e-05 23.5 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_28 PF13518.6 gi|15921414|ref|NP_377083.1| - 4e-05 23.6 0.0 5.7e-05 23.1 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain Zn_Tnp_IS1 PF03811.13 gi|15921414|ref|NP_377083.1| - 0.00011 21.8 4.9 0.00028 20.6 4.9 1.8 1 0 0 1 1 1 1 InsA N-terminal domain Sigma70_r4_2 PF08281.12 gi|15921414|ref|NP_377083.1| - 0.00012 21.6 0.0 0.00018 21.1 0.0 1.2 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_Tnp_1 PF01527.20 gi|15921414|ref|NP_377083.1| - 0.0014 18.9 0.0 0.0019 18.5 0.0 1.2 1 0 0 1 1 1 1 Transposase HTH_Tnp_ISL3 PF13542.6 gi|15921414|ref|NP_377083.1| - 0.0019 17.6 0.0 0.0027 17.1 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_29 PF13551.6 gi|15921414|ref|NP_377083.1| - 0.0069 16.4 0.0 0.011 15.8 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn helix HTH_Tnp_IS630 PF01710.16 gi|15921414|ref|NP_377083.1| - 0.021 14.9 0.1 0.028 14.5 0.1 1.2 1 0 0 1 1 1 0 Transposase GerE PF00196.19 gi|15921414|ref|NP_377083.1| - 0.023 14.2 0.0 0.033 13.7 0.0 1.2 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family HTH_40 PF14493.6 gi|15921414|ref|NP_377083.1| - 0.045 14.2 0.0 0.057 13.9 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain CENP-B_N PF04218.13 gi|15921414|ref|NP_377083.1| - 0.053 13.2 0.0 0.084 12.5 0.0 1.3 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain HTH_Tnp_IS1 PF12759.7 gi|15921414|ref|NP_377083.1| - 0.054 13.1 0.1 0.092 12.4 0.0 1.4 2 0 0 2 2 2 0 InsA C-terminal domain zf-ribbon_3 PF13248.6 gi|15921414|ref|NP_377083.1| - 0.13 11.7 0.9 0.46 10.0 0.2 2.0 2 0 0 2 2 2 0 zinc-ribbon domain zf_C2H2_13 PF18508.1 gi|15921414|ref|NP_377083.1| - 0.17 11.5 2.0 4.2 7.0 0.1 2.3 1 1 1 2 2 2 0 Zinc finger domain HSA PF07529.13 gi|15921415|ref|NP_377084.1| - 0.05 13.9 0.6 0.87 10.0 0.5 2.3 2 1 0 2 2 2 0 HSA TEX12 PF15219.6 gi|15921415|ref|NP_377084.1| - 0.33 11.3 2.9 1.2 9.5 0.6 2.1 2 0 0 2 2 2 0 Testis-expressed 12 Y1_Tnp PF01797.16 gi|15921416|ref|NP_377085.1| - 1.2e-42 144.9 0.1 1.3e-42 144.7 0.1 1.0 1 0 0 1 1 1 1 Transposase IS200 like GAD PF02938.14 gi|15921416|ref|NP_377085.1| - 0.046 13.9 0.3 7.1 6.9 0.0 2.1 2 0 0 2 2 2 0 GAD domain OrfB_IS605 PF01385.19 gi|15921418|ref|NP_377087.1| - 5.8e-36 123.4 0.7 1e-35 122.6 0.7 1.4 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|15921418|ref|NP_377087.1| - 3.9e-19 68.4 0.0 9e-19 67.2 0.0 1.7 1 0 0 1 1 1 1 Putative transposase DNA-binding domain RuvX PF03652.15 gi|15921418|ref|NP_377087.1| - 0.005 17.2 0.0 0.0093 16.3 0.0 1.4 1 0 0 1 1 1 1 Holliday junction resolvase Zn_Tnp_IS1595 PF12760.7 gi|15921418|ref|NP_377087.1| - 0.26 11.3 0.9 0.71 9.9 0.9 1.7 1 0 0 1 1 1 0 Transposase zinc-ribbon domain HTH_24 PF13412.6 gi|15921419|ref|NP_377088.1| - 9.7e-07 28.3 0.1 2.1e-06 27.2 0.1 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|15921419|ref|NP_377088.1| - 0.00018 21.3 0.0 0.00034 20.4 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family DUF1887 PF09002.11 gi|15921419|ref|NP_377088.1| - 0.0003 19.6 0.2 0.0003 19.6 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1887) DUF2250 PF10007.9 gi|15921419|ref|NP_377088.1| - 0.0024 17.9 0.1 0.005 16.9 0.1 1.5 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_11 PF08279.12 gi|15921419|ref|NP_377088.1| - 0.0026 17.6 0.3 0.0054 16.7 0.3 1.5 1 0 0 1 1 1 1 HTH domain HTH_45 PF14947.6 gi|15921419|ref|NP_377088.1| - 0.0046 16.9 0.5 0.014 15.3 0.1 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix HTH_27 PF13463.6 gi|15921419|ref|NP_377088.1| - 0.0055 17.2 0.2 0.01 16.3 0.2 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain FUR PF01475.19 gi|15921419|ref|NP_377088.1| - 0.01 16.0 0.1 0.023 14.8 0.1 1.6 1 0 0 1 1 1 0 Ferric uptake regulator family ArsR PF09824.9 gi|15921419|ref|NP_377088.1| - 0.012 15.3 3.5 1.9 8.0 0.2 2.5 2 1 0 2 2 2 0 ArsR transcriptional regulator MarR PF01047.22 gi|15921419|ref|NP_377088.1| - 0.016 15.2 0.3 0.027 14.4 0.3 1.4 1 0 0 1 1 1 0 MarR family SHOCT PF09851.9 gi|15921419|ref|NP_377088.1| - 0.027 14.2 1.0 0.067 12.9 1.0 1.7 1 0 0 1 1 1 0 Short C-terminal domain TrbC_Ftype PF09673.10 gi|15921419|ref|NP_377088.1| - 0.081 13.0 0.1 0.15 12.1 0.1 1.4 1 0 0 1 1 1 0 Type-F conjugative transfer system pilin assembly protein HTH_Crp_2 PF13545.6 gi|15921419|ref|NP_377088.1| - 0.083 12.9 0.2 0.21 11.6 0.2 1.6 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_20 PF12840.7 gi|15921419|ref|NP_377088.1| - 0.085 12.9 0.0 0.16 12.0 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain DUF1126 PF06565.12 gi|15921420|ref|NP_377089.1| - 0.00041 20.1 0.1 0.3 10.9 0.0 2.4 2 0 0 2 2 2 2 DUF1126 PH-like domain RNA_pol_Rpb1_5 PF04998.17 gi|15921420|ref|NP_377089.1| - 0.0018 17.8 1.1 0.44 9.9 0.1 2.1 2 0 0 2 2 2 2 RNA polymerase Rpb1, domain 5 DUF1107 PF06526.12 gi|15921420|ref|NP_377089.1| - 0.02 14.8 0.2 9 6.3 0.0 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF1107) YebG PF07130.12 gi|15921420|ref|NP_377089.1| - 0.047 13.6 0.0 5.1 7.0 0.0 2.2 2 0 0 2 2 2 0 YebG protein DUF3077 PF11275.8 gi|15921420|ref|NP_377089.1| - 0.051 13.8 0.1 5.4 7.3 0.0 2.5 2 1 0 2 2 2 0 Protein of unknown function (DUF3077) MCH PF02289.16 gi|15921420|ref|NP_377089.1| - 0.069 12.4 1.9 0.2 10.9 0.2 2.3 2 1 1 3 3 3 0 Cyclohydrolase (MCH) Cadherin_3 PF16184.5 gi|15921420|ref|NP_377089.1| - 0.074 13.1 1.3 6.7 6.8 0.2 2.3 2 0 0 2 2 2 0 Cadherin-like DUF2332 PF10094.9 gi|15921420|ref|NP_377089.1| - 0.079 12.4 0.0 8.6 5.7 0.0 2.1 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2332) DUF5405 PF17399.2 gi|15921420|ref|NP_377089.1| - 0.21 11.9 8.2 5.9 7.2 0.3 3.2 2 1 1 3 3 3 0 Domain of unknown function (DUF5405) HEPN PF05168.14 gi|15921421|ref|NP_377090.1| - 2.6e-08 34.0 3.4 3.4e-08 33.6 3.4 1.1 1 0 0 1 1 1 1 HEPN domain DUF155 PF02582.14 gi|15921421|ref|NP_377090.1| - 0.015 15.4 0.7 0.023 14.8 0.5 1.5 1 1 0 1 1 1 0 Uncharacterised ACR, YagE family COG1723 PQQ_2 PF13360.6 gi|15921422|ref|NP_377091.1| - 2.4e-29 102.6 0.0 2.6e-12 46.8 0.0 3.8 1 1 2 3 3 3 3 PQQ-like domain PQQ PF01011.21 gi|15921422|ref|NP_377091.1| - 9.7e-21 72.7 7.8 0.0035 17.2 0.2 7.4 7 0 0 7 7 7 6 PQQ enzyme repeat PQQ_3 PF13570.6 gi|15921422|ref|NP_377091.1| - 5.7e-06 26.6 27.9 0.16 12.5 0.6 8.5 8 1 0 8 8 8 4 PQQ-like domain DDE_Tnp_IS240 PF13610.6 gi|15921423|ref|NP_377092.1| - 4.4e-06 27.0 0.6 6.5e-06 26.4 0.6 1.2 1 0 0 1 1 1 1 DDE domain DDE_Tnp_IS66 PF03050.14 gi|15921423|ref|NP_377092.1| - 0.0048 16.4 0.1 0.0086 15.6 0.1 1.3 1 0 0 1 1 1 1 Transposase IS66 family DUF772 PF05598.11 gi|15921424|ref|NP_377093.1| - 2.6e-08 33.8 0.1 7.6e-08 32.3 0.1 1.8 1 1 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1 PF01609.21 gi|15921424|ref|NP_377093.1| - 0.013 15.1 0.0 0.029 14.0 0.0 1.6 1 1 0 1 1 1 0 Transposase DDE domain Tricorn_C1 PF14684.6 gi|15921425|ref|NP_377094.1| - 3e-25 88.1 1.9 5.9e-25 87.1 1.9 1.5 1 0 0 1 1 1 1 Tricorn protease C1 domain Tricorn_PDZ PF14685.6 gi|15921425|ref|NP_377094.1| - 6.3e-25 87.0 0.1 1.3e-24 85.9 0.1 1.6 1 0 0 1 1 1 1 Tricorn protease PDZ domain Peptidase_S41 PF03572.18 gi|15921425|ref|NP_377094.1| - 3e-24 85.5 0.0 5.9e-24 84.5 0.0 1.5 1 0 0 1 1 1 1 Peptidase family S41 PD40 PF07676.12 gi|15921425|ref|NP_377094.1| - 6.3e-11 41.9 5.6 1e-06 28.5 0.3 4.9 6 0 0 6 6 6 2 WD40-like Beta Propeller Repeat FANCAA PF15146.6 gi|15921426|ref|NP_377095.1| - 0.064 12.3 0.0 0.074 12.1 0.0 1.0 1 0 0 1 1 1 0 Fanconi anemia-associated DUF2207 PF09972.9 gi|15921426|ref|NP_377095.1| - 0.19 10.5 2.1 0.22 10.2 2.1 1.1 1 0 0 1 1 1 0 Predicted membrane protein (DUF2207) DUF2371 PF10177.9 gi|15921426|ref|NP_377095.1| - 0.33 11.1 6.9 1.8 8.7 0.1 2.2 2 0 0 2 2 2 0 Uncharacterised conserved protein (DUF2371) DUF4064 PF13273.6 gi|15921426|ref|NP_377095.1| - 0.48 10.7 12.9 86 3.5 12.9 2.4 1 1 0 1 1 1 0 Protein of unknown function (DUF4064) Trp_oprn_chp PF09534.10 gi|15921426|ref|NP_377095.1| - 0.81 9.5 3.0 2.6 7.8 0.1 2.0 2 0 0 2 2 2 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) DUF3185 PF11381.8 gi|15921426|ref|NP_377095.1| - 3.7 7.6 17.2 0.71 9.9 3.1 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF3185) TrbC PF04956.13 gi|15921426|ref|NP_377095.1| - 8.8 6.6 11.0 3.4 8.0 4.2 2.4 2 0 0 2 2 2 0 TrbC/VIRB2 family Sugar_tr PF00083.24 gi|15921427|ref|NP_377096.1| - 7.9e-37 127.2 22.5 9e-37 127.0 22.5 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|15921427|ref|NP_377096.1| - 2e-29 102.6 48.6 1e-27 97.0 28.5 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily SpoV PF08183.11 gi|15921427|ref|NP_377096.1| - 0.49 10.4 2.6 16 5.6 0.3 2.6 2 0 0 2 2 2 0 Stage V sporulation protein family Rieske PF00355.26 gi|15921428|ref|NP_377097.1| - 1.3e-08 34.7 0.0 1.5e-08 34.4 0.0 1.1 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 gi|15921428|ref|NP_377097.1| - 0.18 11.8 0.0 0.21 11.5 0.0 1.2 1 0 0 1 1 1 0 Rieske-like [2Fe-2S] domain SAM_LFY PF01698.16 gi|15921429|ref|NP_377098.1| - 0.02 14.8 0.0 0.042 13.8 0.0 1.6 1 0 0 1 1 1 0 Floricaula / Leafy protein SAM domain Not3 PF04065.15 gi|15921429|ref|NP_377098.1| - 0.039 13.4 0.8 0.061 12.8 0.8 1.2 1 0 0 1 1 1 0 Not1 N-terminal domain, CCR4-Not complex component DUF2120 PF09893.9 gi|15921429|ref|NP_377098.1| - 0.078 13.1 0.6 0.083 13.0 0.6 1.4 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2120) FGAR-AT_linker PF18072.1 gi|15921429|ref|NP_377098.1| - 0.099 13.2 0.1 1.2 9.7 0.0 2.4 1 1 1 2 2 2 0 Formylglycinamide ribonucleotide amidotransferase linker domain Hemerythrin PF01814.23 gi|15921430|ref|NP_377099.1| - 4.2e-12 46.8 1.9 6.8e-12 46.2 1.9 1.3 1 0 0 1 1 1 1 Hemerythrin HHE cation binding domain DUF4363 PF14276.6 gi|15921430|ref|NP_377099.1| - 0.011 15.8 0.7 0.12 12.5 0.1 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4363) Latarcin PF10279.9 gi|15921430|ref|NP_377099.1| - 0.016 15.6 0.5 0.56 10.7 0.0 2.2 2 0 0 2 2 2 0 Latarcin precursor YscO-like PF16789.5 gi|15921430|ref|NP_377099.1| - 0.047 13.7 0.0 0.068 13.2 0.0 1.3 1 0 0 1 1 1 0 YscO-like protein PBECR3 PF18812.1 gi|15921431|ref|NP_377100.1| - 0.007 16.3 0.4 0.17 11.9 0.1 2.1 2 0 0 2 2 2 2 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3 Fer4 PF00037.27 gi|15921432|ref|NP_377101.1| - 2.6e-13 49.2 15.7 3.4e-07 29.8 6.6 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|15921432|ref|NP_377101.1| - 1.7e-09 37.7 19.4 1.2e-07 31.8 8.1 1.6 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15921432|ref|NP_377101.1| - 6.8e-09 35.8 5.9 9.6e-09 35.3 5.9 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15921432|ref|NP_377101.1| - 9.8e-09 35.7 7.6 2.1e-08 34.6 7.7 1.5 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15921432|ref|NP_377101.1| - 2.5e-07 30.7 6.7 3.4e-07 30.3 6.7 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15921432|ref|NP_377101.1| - 1.6e-05 24.8 14.6 0.00095 19.1 5.8 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|15921432|ref|NP_377101.1| - 3.4e-05 24.7 8.5 0.0081 17.1 3.0 2.2 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_13 PF13370.6 gi|15921432|ref|NP_377101.1| - 5.3e-05 23.7 11.0 0.018 15.5 0.7 2.3 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_8 PF13183.6 gi|15921432|ref|NP_377101.1| - 0.00019 21.8 7.7 0.00094 19.6 7.9 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15921432|ref|NP_377101.1| - 0.0002 21.6 9.4 0.049 14.1 3.3 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|15921432|ref|NP_377101.1| - 0.00025 20.9 11.2 0.055 13.6 3.7 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|15921432|ref|NP_377101.1| - 0.00032 21.2 0.9 0.3 11.7 0.4 2.2 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|15921432|ref|NP_377101.1| - 0.00051 20.8 14.8 0.012 16.5 6.8 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain ETF_QO PF05187.13 gi|15921432|ref|NP_377101.1| - 0.0015 18.6 0.7 0.0018 18.4 0.7 1.1 1 0 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_18 PF13746.6 gi|15921432|ref|NP_377101.1| - 0.021 15.0 11.2 0.025 14.8 3.0 2.1 1 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|15921432|ref|NP_377101.1| - 0.29 11.9 11.4 3.6 8.4 0.3 2.8 2 1 0 2 2 2 0 4Fe-4S single cluster domain Fer4_22 PF17179.4 gi|15921432|ref|NP_377101.1| - 3.9 8.4 8.5 9.8 7.1 2.3 2.2 1 1 0 2 2 2 0 4Fe-4S dicluster domain DEDD_Tnp_IS110 PF01548.17 gi|15921433|ref|NP_377102.1| - 2.3e-05 24.3 0.0 2.9e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 Transposase RNase_H_2 PF13482.6 gi|15921433|ref|NP_377102.1| - 0.12 12.4 0.1 16 5.4 0.0 2.1 1 1 0 2 2 2 0 RNase_H superfamily DUF2543 PF10820.8 gi|15921433|ref|NP_377102.1| - 0.17 12.1 0.0 0.18 12.0 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2543) Transposase_20 PF02371.16 gi|15921434|ref|NP_377103.1| - 3.5e-27 94.6 0.1 7.9e-27 93.4 0.0 1.6 2 0 0 2 2 2 1 Transposase IS116/IS110/IS902 family ICMT PF04140.14 gi|15921450|ref|NP_377119.1| - 1.2e-13 51.3 0.2 2.3e-13 50.4 0.2 1.5 1 0 0 1 1 1 1 Isoprenylcysteine carboxyl methyltransferase (ICMT) family PEMT PF04191.13 gi|15921450|ref|NP_377119.1| - 2.3e-11 44.0 1.2 2.3e-11 44.0 1.2 1.7 2 0 0 2 2 2 1 Phospholipid methyltransferase Serinc PF03348.15 gi|15921450|ref|NP_377119.1| - 0.22 10.4 4.7 0.3 10.0 4.7 1.1 1 0 0 1 1 1 0 Serine incorporator (Serinc) DUF2304 PF10066.9 gi|15921450|ref|NP_377119.1| - 4.1 7.7 13.4 0.41 10.9 8.5 1.9 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2304) DnaI_N PF07319.11 gi|15921451|ref|NP_377120.1| - 0.097 13.4 3.6 0.14 12.8 1.5 2.1 1 1 0 2 2 2 0 Primosomal protein DnaI N-terminus AAA_15 PF13175.6 gi|15921452|ref|NP_377121.1| - 2.1e-11 44.1 10.4 3.4e-11 43.5 5.5 2.6 2 1 0 2 2 2 1 AAA ATPase domain AAA_23 PF13476.6 gi|15921452|ref|NP_377121.1| - 2.3e-06 28.2 1.7 1.8e-05 25.4 0.1 2.3 2 1 0 2 2 2 1 AAA domain AAA_21 PF13304.6 gi|15921452|ref|NP_377121.1| - 2.7e-06 27.4 16.0 0.0028 17.5 0.1 3.8 4 0 0 4 4 4 2 AAA domain, putative AbiEii toxin, Type IV TA system MMR_HSR1 PF01926.23 gi|15921452|ref|NP_377121.1| - 0.0031 17.6 0.0 0.011 15.8 0.0 1.9 2 0 0 2 2 2 1 50S ribosome-binding GTPase AAA_16 PF13191.6 gi|15921452|ref|NP_377121.1| - 0.03 14.7 0.0 7.4 6.9 0.0 2.4 2 0 0 2 2 2 0 AAA ATPase domain AAA_29 PF13555.6 gi|15921452|ref|NP_377121.1| - 0.03 14.1 0.0 0.066 13.0 0.0 1.5 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_27 PF13514.6 gi|15921452|ref|NP_377121.1| - 0.066 12.8 0.0 0.11 12.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain ABC_tran PF00005.27 gi|15921452|ref|NP_377121.1| - 0.074 13.6 0.0 0.2 12.1 0.0 1.7 1 0 0 1 1 1 0 ABC transporter AbiJ_NTD4 PF18863.1 gi|15921452|ref|NP_377121.1| - 0.13 12.8 1.9 5.9 7.4 0.2 2.9 2 1 0 2 2 2 0 AbiJ N-terminal domain 4 AMP-binding PF00501.28 gi|15921453|ref|NP_377122.1| - 3.8e-74 249.8 0.0 5.5e-74 249.3 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|15921453|ref|NP_377122.1| - 2.3e-19 70.1 0.3 5.9e-19 68.8 0.3 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain DUF1310 PF07006.11 gi|15921453|ref|NP_377122.1| - 0.025 14.5 0.0 0.072 13.1 0.0 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF1310) BPL_LplA_LipB PF03099.19 gi|15921456|ref|NP_377125.1| - 0.001 19.0 0.0 0.0019 18.1 0.0 1.5 1 1 0 1 1 1 1 Biotin/lipoate A/B protein ligase family Radical_SAM PF04055.21 gi|15921457|ref|NP_377126.1| - 1.4e-07 32.1 7.7 1.7e-07 31.8 3.7 2.5 2 1 0 2 2 2 1 Radical SAM superfamily zf-C2HC5 PF06221.13 gi|15921457|ref|NP_377126.1| - 0.02 14.9 0.5 2 8.4 0.2 2.4 2 0 0 2 2 2 0 Putative zinc finger motif, C2HC5-type FAM193_C PF15914.5 gi|15921457|ref|NP_377126.1| - 0.087 12.6 0.2 0.22 11.3 0.1 1.7 1 1 1 2 2 2 0 FAM193 family C-terminal FAD_binding_2 PF00890.24 gi|15921459|ref|NP_377128.1| - 9.1e-70 235.8 0.0 1.1e-69 235.5 0.0 1.0 1 0 0 1 1 1 1 FAD binding domain DAO PF01266.24 gi|15921459|ref|NP_377128.1| - 2.9e-12 46.8 0.9 7.4e-11 42.2 0.9 2.2 1 1 0 1 1 1 1 FAD dependent oxidoreductase Succ_DH_flav_C PF02910.20 gi|15921459|ref|NP_377128.1| - 1e-09 38.5 0.0 1.7e-06 28.0 0.0 2.4 1 1 1 2 2 2 2 Fumarate reductase flavoprotein C-term Pyr_redox_2 PF07992.14 gi|15921459|ref|NP_377128.1| - 4.8e-09 35.9 4.8 0.00035 19.9 0.7 3.2 2 1 1 3 3 3 3 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|15921459|ref|NP_377128.1| - 2.6e-07 30.1 1.4 0.0058 15.8 0.5 2.4 2 0 0 2 2 2 2 Glucose inhibited division protein A HI0933_like PF03486.14 gi|15921459|ref|NP_377128.1| - 4.8e-06 25.5 2.9 0.0057 15.4 0.0 2.6 3 0 0 3 3 3 2 HI0933-like protein NAD_binding_8 PF13450.6 gi|15921459|ref|NP_377128.1| - 4.8e-05 23.5 1.9 4.8e-05 23.5 1.9 2.1 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox PF00070.27 gi|15921459|ref|NP_377128.1| - 9.3e-05 22.9 1.1 0.019 15.5 0.2 2.8 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|15921459|ref|NP_377128.1| - 0.0017 17.7 1.9 0.0025 17.1 1.9 1.2 1 0 0 1 1 1 1 FAD binding domain FAD_oxidored PF12831.7 gi|15921459|ref|NP_377128.1| - 0.0022 17.4 1.1 0.0042 16.5 1.1 1.5 1 1 0 1 1 1 1 FAD dependent oxidoreductase Pyr_redox_3 PF13738.6 gi|15921459|ref|NP_377128.1| - 0.0033 16.7 1.6 0.99 8.6 0.7 2.3 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Trp_halogenase PF04820.14 gi|15921459|ref|NP_377128.1| - 0.0033 16.3 1.6 0.3 9.9 0.0 2.1 2 0 0 2 2 2 2 Tryptophan halogenase ApbA PF02558.16 gi|15921459|ref|NP_377128.1| - 0.051 13.2 1.1 0.12 12.0 1.1 1.7 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA NAD_binding_9 PF13454.6 gi|15921459|ref|NP_377128.1| - 0.33 10.9 1.0 3.1 7.8 0.0 2.5 2 0 0 2 2 2 0 FAD-NAD(P)-binding NadA PF02445.16 gi|15921460|ref|NP_377129.1| - 2.4e-104 348.7 0.2 2.7e-104 348.5 0.2 1.0 1 0 0 1 1 1 1 Quinolinate synthetase A protein QRPTase_C PF01729.19 gi|15921461|ref|NP_377130.1| - 1.2e-60 204.1 0.1 1.6e-60 203.7 0.1 1.1 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain QRPTase_N PF02749.16 gi|15921461|ref|NP_377130.1| - 1.1e-21 76.7 0.0 2.5e-21 75.5 0.0 1.7 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain CCDC73 PF15818.5 gi|15921461|ref|NP_377130.1| - 8.2e-05 20.7 0.0 0.00012 20.2 0.0 1.1 1 0 0 1 1 1 1 Coiled-coil domain-containing protein 73 family TMP-TENI PF02581.17 gi|15921461|ref|NP_377130.1| - 0.036 13.4 0.7 0.68 9.2 0.7 2.2 1 1 0 1 1 1 0 Thiamine monophosphate synthase Ribul_P_3_epim PF00834.19 gi|15921461|ref|NP_377130.1| - 0.068 12.5 1.7 0.46 9.8 0.2 2.6 2 1 1 3 3 3 0 Ribulose-phosphate 3 epimerase family UPF0051 PF01458.17 gi|15921462|ref|NP_377131.1| - 2.6e-37 128.6 0.6 4.6e-37 127.8 0.6 1.4 1 1 0 1 1 1 1 Uncharacterized protein family (UPF0051) UPF0051 PF01458.17 gi|15921463|ref|NP_377132.1| - 4.6e-63 212.8 0.0 6e-63 212.4 0.0 1.1 1 0 0 1 1 1 1 Uncharacterized protein family (UPF0051) DUF4295 PF14128.6 gi|15921463|ref|NP_377132.1| - 0.086 12.7 0.0 0.31 10.9 0.0 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF4295) ABC_tran PF00005.27 gi|15921464|ref|NP_377133.1| - 1.4e-23 83.9 0.1 2e-23 83.4 0.1 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|15921464|ref|NP_377133.1| - 6.1e-08 32.8 0.1 0.012 15.5 0.1 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|15921464|ref|NP_377133.1| - 9.8e-07 28.4 0.3 5.8e-06 25.9 0.3 1.9 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain DUF1439 PF07273.12 gi|15921464|ref|NP_377133.1| - 0.0075 16.1 0.0 0.012 15.4 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF1439) AAA_15 PF13175.6 gi|15921464|ref|NP_377133.1| - 0.011 15.5 0.1 0.025 14.3 0.1 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA_29 PF13555.6 gi|15921464|ref|NP_377133.1| - 0.016 14.9 0.4 0.036 13.8 0.4 1.6 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_13 PF13166.6 gi|15921464|ref|NP_377133.1| - 0.028 13.1 0.1 0.06 12.0 0.0 1.5 2 0 0 2 2 2 0 AAA domain RsgA_GTPase PF03193.16 gi|15921464|ref|NP_377133.1| - 0.028 14.3 0.2 0.049 13.5 0.2 1.4 1 0 0 1 1 1 0 RsgA GTPase AAA PF00004.29 gi|15921464|ref|NP_377133.1| - 0.029 14.8 0.2 0.12 12.8 0.2 2.0 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.6 gi|15921464|ref|NP_377133.1| - 0.036 14.6 0.3 0.044 14.3 0.3 1.6 1 1 0 1 1 1 0 AAA domain AAA_27 PF13514.6 gi|15921464|ref|NP_377133.1| - 0.094 12.3 0.0 0.15 11.6 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 gi|15921464|ref|NP_377133.1| - 0.13 11.9 0.0 0.22 11.1 0.0 1.4 1 0 0 1 1 1 0 AAA domain GLTSCR1 PF15249.6 gi|15921465|ref|NP_377134.1| - 0.11 12.9 0.1 0.39 11.2 0.0 1.9 2 0 0 2 2 2 0 Conserved region of unknown function on GLTSCR protein CitMHS_2 PF16980.5 gi|15921465|ref|NP_377134.1| - 0.32 9.6 1.2 0.48 9.0 1.2 1.2 1 0 0 1 1 1 0 Putative citrate transport YojJ PF10372.9 gi|15921465|ref|NP_377134.1| - 9.1 6.5 12.6 3.1 8.0 0.3 3.5 4 1 0 4 4 4 0 Bacterial membrane-spanning protein N-terminus HSP20 PF00011.21 gi|15921466|ref|NP_377135.1| - 0.00045 20.3 0.0 0.0073 16.4 0.0 2.3 1 1 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|15921466|ref|NP_377135.1| - 0.021 14.4 0.1 2.2 7.9 0.0 2.2 1 1 1 2 2 2 0 HSP20-like domain found in ArsA PTPlike_phytase PF14566.6 gi|15921466|ref|NP_377135.1| - 0.054 13.6 0.2 0.063 13.4 0.2 1.2 1 0 0 1 1 1 0 Inositol hexakisphosphate PAC2 PF09754.9 gi|15921467|ref|NP_377136.1| - 2.5e-37 129.0 0.1 2.9e-37 128.7 0.1 1.1 1 0 0 1 1 1 1 PAC2 family GCV_H PF01597.19 gi|15921468|ref|NP_377137.1| - 3.4e-45 152.9 1.2 3.9e-45 152.7 1.2 1.0 1 0 0 1 1 1 1 Glycine cleavage H-protein Biotin_lipoyl PF00364.22 gi|15921468|ref|NP_377137.1| - 0.00059 19.6 0.3 0.001 18.8 0.3 1.3 1 0 0 1 1 1 1 Biotin-requiring enzyme Tim44 PF04280.15 gi|15921468|ref|NP_377137.1| - 0.05 13.7 0.1 1.5 9.0 0.0 2.1 2 0 0 2 2 2 0 Tim44-like domain RnfC_N PF13375.6 gi|15921468|ref|NP_377137.1| - 0.087 12.8 0.1 0.27 11.2 0.0 1.8 2 0 0 2 2 2 0 RnfC Barrel sandwich hybrid domain GCV_T PF01571.21 gi|15921469|ref|NP_377138.1| - 2.3e-62 210.7 0.0 2.8e-62 210.4 0.0 1.1 1 0 0 1 1 1 1 Aminomethyltransferase folate-binding domain GCV_T_C PF08669.11 gi|15921469|ref|NP_377138.1| - 2.4e-15 56.2 0.0 3.9e-15 55.5 0.0 1.4 1 0 0 1 1 1 1 Glycine cleavage T-protein C-terminal barrel domain GDC-P PF02347.16 gi|15921470|ref|NP_377139.1| - 1.6e-118 396.3 0.0 1.9e-118 396.0 0.0 1.0 1 0 0 1 1 1 1 Glycine cleavage system P-protein Aminotran_5 PF00266.19 gi|15921470|ref|NP_377139.1| - 1.8e-05 23.9 0.1 7.2e-05 21.9 0.0 1.8 2 0 0 2 2 2 1 Aminotransferase class-V Beta_elim_lyase PF01212.21 gi|15921470|ref|NP_377139.1| - 0.00036 19.9 0.0 0.00062 19.1 0.0 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_1_2 PF00155.21 gi|15921470|ref|NP_377139.1| - 0.0054 15.9 0.1 0.012 14.8 0.0 1.6 2 0 0 2 2 2 1 Aminotransferase class I and II GDC-P PF02347.16 gi|15921471|ref|NP_377140.1| - 2.2e-11 43.2 0.0 2.1e-10 40.0 0.0 1.9 2 0 0 2 2 2 1 Glycine cleavage system P-protein Aminotran_5 PF00266.19 gi|15921471|ref|NP_377140.1| - 2.2e-07 30.2 0.0 4.1e-07 29.3 0.0 1.4 1 1 0 1 1 1 1 Aminotransferase class-V Peptidase_S24 PF00717.23 gi|15921472|ref|NP_377141.1| - 0.021 14.8 0.1 0.03 14.3 0.1 1.4 1 0 0 1 1 1 0 Peptidase S24-like Zn-ribbon_8 PF09723.10 gi|15921473|ref|NP_377142.1| - 0.036 14.2 0.3 0.26 11.5 0.3 2.1 2 0 0 2 2 2 0 Zinc ribbon domain DUF2070 PF09843.9 gi|15921474|ref|NP_377143.1| - 0.92 7.7 11.4 0.99 7.6 11.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) Sid-5 PF17204.3 gi|15921474|ref|NP_377143.1| - 9.9 6.4 6.8 1.2 9.4 1.8 1.9 2 1 0 2 2 2 0 Sid-5 family Enolase_C PF00113.22 gi|15921475|ref|NP_377144.1| - 4.8e-96 321.5 0.1 7.6e-96 320.8 0.1 1.2 1 0 0 1 1 1 1 Enolase, C-terminal TIM barrel domain Enolase_N PF03952.16 gi|15921475|ref|NP_377144.1| - 4.2e-39 133.7 0.2 6.7e-39 133.1 0.2 1.3 1 0 0 1 1 1 1 Enolase, N-terminal domain CdvA PF18822.1 gi|15921476|ref|NP_377145.1| - 1.5e-41 141.1 13.0 2.3e-41 140.4 13.0 1.3 1 0 0 1 1 1 1 CdvA-like coiled-coil domain Syntaxin-6_N PF09177.11 gi|15921476|ref|NP_377145.1| - 0.016 15.7 1.4 0.032 14.8 1.4 1.6 1 0 0 1 1 1 0 Syntaxin 6, N-terminal PRC PF05239.16 gi|15921476|ref|NP_377145.1| - 0.051 13.7 2.1 0.088 12.9 2.1 1.3 1 0 0 1 1 1 0 PRC-barrel domain Mt_ATP-synt_D PF05873.12 gi|15921476|ref|NP_377145.1| - 0.056 13.3 2.4 0.084 12.7 2.2 1.4 1 1 0 1 1 1 0 ATP synthase D chain, mitochondrial (ATP5H) YojJ PF10372.9 gi|15921476|ref|NP_377145.1| - 0.063 13.4 2.2 0.75 9.9 0.6 2.8 3 0 0 3 3 3 0 Bacterial membrane-spanning protein N-terminus Exonuc_VII_L PF02601.15 gi|15921476|ref|NP_377145.1| - 0.072 12.6 1.7 0.093 12.3 1.7 1.1 1 0 0 1 1 1 0 Exonuclease VII, large subunit Herpes_UL25 PF01499.16 gi|15921476|ref|NP_377145.1| - 0.09 11.3 0.4 0.11 11.0 0.4 1.1 1 0 0 1 1 1 0 Herpesvirus UL25 family FapA PF03961.13 gi|15921476|ref|NP_377145.1| - 0.11 11.1 8.7 0.15 10.7 8.7 1.4 1 1 0 1 1 1 0 Flagellar Assembly Protein A Herpes_BLRF2 PF05812.12 gi|15921476|ref|NP_377145.1| - 0.13 12.5 3.4 0.24 11.5 3.4 1.5 1 0 0 1 1 1 0 Herpesvirus BLRF2 protein LMBR1 PF04791.16 gi|15921476|ref|NP_377145.1| - 0.41 9.5 2.9 0.46 9.3 2.9 1.1 1 0 0 1 1 1 0 LMBR1-like membrane protein FliT PF05400.13 gi|15921476|ref|NP_377145.1| - 0.63 10.9 7.6 0.29 12.0 4.8 1.7 2 0 0 2 2 2 0 Flagellar protein FliT ISG65-75 PF11727.8 gi|15921476|ref|NP_377145.1| - 1.2 8.3 5.0 1.1 8.4 2.8 1.8 1 1 1 2 2 2 0 Invariant surface glycoprotein Fmp27_WPPW PF10359.9 gi|15921476|ref|NP_377145.1| - 3.3 6.4 9.2 1.4 7.7 3.9 1.9 1 1 1 2 2 2 0 RNA pol II promoter Fmp27 protein domain Snf7 PF03357.21 gi|15921477|ref|NP_377146.1| - 3.1e-08 33.4 3.1 3.1e-08 33.4 3.1 2.0 2 0 0 2 2 2 1 Snf7 Baculo_PEP_C PF04513.12 gi|15921477|ref|NP_377146.1| - 0.00055 20.0 0.8 0.28 11.2 0.1 2.5 1 1 1 2 2 2 2 Baculovirus polyhedron envelope protein, PEP, C terminus PheRS_DBD1 PF18552.1 gi|15921477|ref|NP_377146.1| - 0.0024 17.6 0.2 0.0066 16.2 0.1 1.9 1 1 0 1 1 1 1 PheRS DNA binding domain 1 Baculo_RING PF05883.11 gi|15921477|ref|NP_377146.1| - 0.032 14.2 0.3 18 5.4 0.1 2.9 2 1 1 3 3 3 0 Baculovirus U-box/Ring-like domain TrmB PF01978.19 gi|15921477|ref|NP_377146.1| - 0.082 12.8 0.1 0.38 10.7 0.0 2.1 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB DUF4795 PF16043.5 gi|15921477|ref|NP_377146.1| - 0.78 9.3 6.5 0.16 11.6 1.4 2.1 1 1 0 2 2 2 0 Domain of unknown function (DUF4795) AAA PF00004.29 gi|15921478|ref|NP_377147.1| - 9.6e-41 139.3 0.0 7.1e-40 136.5 0.0 2.1 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) MIT PF04212.18 gi|15921478|ref|NP_377147.1| - 8.7e-12 44.9 3.6 3e-11 43.2 3.6 1.9 1 0 0 1 1 1 1 MIT (microtubule interacting and transport) domain AAA_lid_3 PF17862.1 gi|15921478|ref|NP_377147.1| - 3.5e-10 39.5 0.0 1e-09 38.0 0.0 1.8 1 0 0 1 1 1 1 AAA+ lid domain Vps4_C PF09336.10 gi|15921478|ref|NP_377147.1| - 4.6e-09 36.1 1.3 6.3e-08 32.5 0.1 2.7 2 1 0 2 2 2 1 Vps4 C terminal oligomerisation domain AAA_2 PF07724.14 gi|15921478|ref|NP_377147.1| - 5.8e-07 29.8 0.3 1.4e-06 28.5 0.0 1.8 2 0 0 2 2 1 1 AAA domain (Cdc48 subfamily) AAA_16 PF13191.6 gi|15921478|ref|NP_377147.1| - 8.2e-07 29.6 0.0 0.0023 18.3 0.0 2.5 1 1 1 2 2 2 2 AAA ATPase domain RuvB_N PF05496.12 gi|15921478|ref|NP_377147.1| - 1.5e-06 28.1 0.0 1.5e-05 24.8 0.0 2.2 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain AAA_14 PF13173.6 gi|15921478|ref|NP_377147.1| - 3.7e-06 27.0 0.0 1.1e-05 25.4 0.0 1.8 1 0 0 1 1 1 1 AAA domain AAA_5 PF07728.14 gi|15921478|ref|NP_377147.1| - 2e-05 24.6 0.5 0.00071 19.6 0.1 3.1 3 1 0 3 3 1 1 AAA domain (dynein-related subfamily) AAA_25 PF13481.6 gi|15921478|ref|NP_377147.1| - 2.5e-05 23.9 0.0 0.032 13.8 0.0 2.3 2 0 0 2 2 2 2 AAA domain TIP49 PF06068.13 gi|15921478|ref|NP_377147.1| - 4.3e-05 22.9 0.4 0.00011 21.6 0.0 1.7 2 0 0 2 2 2 1 TIP49 P-loop domain AAA_22 PF13401.6 gi|15921478|ref|NP_377147.1| - 0.00017 21.9 0.0 0.0082 16.4 0.0 2.6 1 1 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|15921478|ref|NP_377147.1| - 0.00024 20.9 0.2 0.0035 17.1 0.0 2.6 2 1 0 2 2 2 1 AAA domain AAA_18 PF13238.6 gi|15921478|ref|NP_377147.1| - 0.00062 20.3 0.1 0.0036 17.8 0.1 2.4 1 1 0 1 1 1 1 AAA domain TPR_6 PF13174.6 gi|15921478|ref|NP_377147.1| - 0.0019 18.7 0.4 0.011 16.3 0.1 2.5 2 0 0 2 2 1 1 Tetratricopeptide repeat Mg_chelatase PF01078.21 gi|15921478|ref|NP_377147.1| - 0.002 17.6 0.0 0.0048 16.3 0.0 1.6 1 0 0 1 1 1 1 Magnesium chelatase, subunit ChlI ResIII PF04851.15 gi|15921478|ref|NP_377147.1| - 0.0028 17.7 0.1 0.16 11.9 0.0 2.4 1 1 1 2 2 2 1 Type III restriction enzyme, res subunit RNA_helicase PF00910.22 gi|15921478|ref|NP_377147.1| - 0.0031 17.9 0.1 0.021 15.2 0.0 2.4 3 0 0 3 3 2 1 RNA helicase ATPase_2 PF01637.18 gi|15921478|ref|NP_377147.1| - 0.0071 16.3 10.6 0.068 13.1 0.5 3.6 2 2 2 4 4 4 2 ATPase domain predominantly from Archaea ABC_tran PF00005.27 gi|15921478|ref|NP_377147.1| - 0.01 16.3 0.1 0.11 13.1 0.0 2.3 2 1 0 2 2 2 0 ABC transporter Sigma54_activat PF00158.26 gi|15921478|ref|NP_377147.1| - 0.012 15.3 0.0 0.28 10.9 0.0 2.3 2 0 0 2 2 2 0 Sigma-54 interaction domain TPR_11 PF13414.6 gi|15921478|ref|NP_377147.1| - 0.015 14.9 1.2 0.015 14.9 1.2 2.2 2 1 0 2 2 2 0 TPR repeat NACHT PF05729.12 gi|15921478|ref|NP_377147.1| - 0.021 14.7 0.0 0.063 13.2 0.0 1.8 1 1 0 1 1 1 0 NACHT domain Zeta_toxin PF06414.12 gi|15921478|ref|NP_377147.1| - 0.022 14.1 0.0 0.095 12.0 0.0 2.1 2 0 0 2 2 2 0 Zeta toxin AAA_7 PF12775.7 gi|15921478|ref|NP_377147.1| - 0.025 14.1 0.0 0.067 12.7 0.0 1.7 1 0 0 1 1 1 0 P-loop containing dynein motor region IstB_IS21 PF01695.17 gi|15921478|ref|NP_377147.1| - 0.03 14.1 0.0 0.058 13.1 0.0 1.5 1 0 0 1 1 1 0 IstB-like ATP binding protein Use1 PF09753.9 gi|15921478|ref|NP_377147.1| - 0.035 13.8 2.9 0.44 10.2 0.7 2.9 2 1 1 3 3 3 0 Membrane fusion protein Use1 DUF815 PF05673.13 gi|15921478|ref|NP_377147.1| - 0.039 13.1 0.0 0.084 12.0 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF815) Gp-FAR-1 PF05823.12 gi|15921478|ref|NP_377147.1| - 0.041 14.2 7.3 0.042 14.2 0.1 3.1 4 0 0 4 4 2 0 Nematode fatty acid retinoid binding protein (Gp-FAR-1) SKI PF01202.22 gi|15921478|ref|NP_377147.1| - 0.043 13.9 0.1 0.12 12.5 0.0 1.8 2 0 0 2 2 1 0 Shikimate kinase Parvo_NS1 PF01057.17 gi|15921478|ref|NP_377147.1| - 0.052 12.6 0.0 0.11 11.6 0.0 1.4 1 0 0 1 1 1 0 Parvovirus non-structural protein NS1 AAA_33 PF13671.6 gi|15921478|ref|NP_377147.1| - 0.084 13.0 0.0 0.16 12.1 0.0 1.6 1 0 0 1 1 1 0 AAA domain AAA_17 PF13207.6 gi|15921478|ref|NP_377147.1| - 0.087 13.2 0.1 0.33 11.4 0.0 2.1 2 0 0 2 2 1 0 AAA domain DASH_Dad4 PF08650.10 gi|15921478|ref|NP_377147.1| - 0.099 12.6 1.4 10 6.1 0.0 3.3 2 1 1 3 3 3 0 DASH complex subunit Dad4 TPR_1 PF00515.28 gi|15921478|ref|NP_377147.1| - 0.13 12.1 0.4 0.45 10.4 0.4 2.0 1 0 0 1 1 1 0 Tetratricopeptide repeat AAA_3 PF07726.11 gi|15921478|ref|NP_377147.1| - 0.15 11.9 0.0 0.36 10.7 0.0 1.7 1 0 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Fic_N PF13784.6 gi|15921478|ref|NP_377147.1| - 0.17 12.0 1.5 0.77 9.8 0.1 2.6 2 0 0 2 2 2 0 Fic/DOC family N-terminal ATP-synt_ab PF00006.25 gi|15921478|ref|NP_377147.1| - 0.17 11.5 0.0 0.35 10.5 0.0 1.5 1 0 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain TPR_2 PF07719.17 gi|15921478|ref|NP_377147.1| - 0.21 11.8 1.0 0.47 10.7 0.1 2.2 2 0 0 2 2 1 0 Tetratricopeptide repeat Viral_helicase1 PF01443.18 gi|15921478|ref|NP_377147.1| - 0.23 11.2 0.0 0.46 10.2 0.0 1.5 1 0 0 1 1 1 0 Viral (Superfamily 1) RNA helicase AAA_23 PF13476.6 gi|15921478|ref|NP_377147.1| - 4.8 7.6 6.3 14 6.1 0.0 2.8 3 0 0 3 3 3 0 AAA domain Topoisom_bac PF01131.20 gi|15921479|ref|NP_377148.1| - 7.4e-110 367.8 0.2 9.9e-110 367.4 0.2 1.2 1 0 0 1 1 1 1 DNA topoisomerase Toprim PF01751.22 gi|15921479|ref|NP_377148.1| - 5.8e-15 55.4 0.2 3.3e-14 52.9 0.1 2.4 2 0 0 2 2 2 1 Toprim domain DUF2634 PF10934.8 gi|15921479|ref|NP_377148.1| - 0.047 13.8 0.6 0.047 13.8 0.6 3.4 3 1 0 3 3 3 0 Protein of unknown function (DUF2634) RNA_pol_Rpb6 PF01192.22 gi|15921480|ref|NP_377149.1| - 5.5e-13 48.6 0.0 7.2e-13 48.2 0.0 1.2 1 0 0 1 1 1 1 RNA polymerase Rpb6 DDE_Tnp_1_4 PF13701.6 gi|15921480|ref|NP_377149.1| - 0.061 11.6 0.0 0.061 11.6 0.0 1.0 1 0 0 1 1 1 0 Transposase DDE domain group 1 Aminotran_5 PF00266.19 gi|15921481|ref|NP_377150.1| - 3.2e-28 98.7 0.0 3.9e-28 98.4 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 gi|15921481|ref|NP_377150.1| - 0.00018 20.8 0.0 0.00043 19.6 0.0 1.5 1 1 0 1 1 1 1 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 gi|15921481|ref|NP_377150.1| - 0.00057 18.5 0.0 0.00078 18.1 0.0 1.1 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme OKR_DC_1 PF01276.20 gi|15921481|ref|NP_377150.1| - 0.041 12.6 0.1 0.13 11.0 0.0 1.7 2 0 0 2 2 2 0 Orn/Lys/Arg decarboxylase, major domain DUF684 PF05075.14 gi|15921481|ref|NP_377150.1| - 0.12 11.4 0.0 0.25 10.3 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF684) 2-Hacid_dh_C PF02826.19 gi|15921482|ref|NP_377151.1| - 8.1e-51 171.9 0.5 1.6e-50 171.0 0.3 1.6 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 2-Hacid_dh PF00389.30 gi|15921482|ref|NP_377151.1| - 6e-35 119.8 0.9 7.2e-35 119.6 0.9 1.0 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AdoHcyase_NAD PF00670.21 gi|15921482|ref|NP_377151.1| - 7.1e-05 22.9 4.0 0.00024 21.2 0.7 2.3 2 0 0 2 2 2 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NAD_binding_2 PF03446.15 gi|15921482|ref|NP_377151.1| - 0.0007 19.8 2.1 0.0009 19.4 0.4 2.0 2 1 0 2 2 2 1 NAD binding domain of 6-phosphogluconate dehydrogenase IlvN PF07991.12 gi|15921482|ref|NP_377151.1| - 0.014 15.0 0.1 0.037 13.6 0.1 1.8 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain VirK PF06903.12 gi|15921482|ref|NP_377151.1| - 0.019 15.1 0.0 0.041 14.0 0.0 1.6 1 0 0 1 1 1 0 VirK protein Rossmann-like PF10727.9 gi|15921482|ref|NP_377151.1| - 0.019 14.8 0.5 0.043 13.7 0.1 1.7 2 0 0 2 2 2 0 Rossmann-like domain CNP1 PF08750.11 gi|15921482|ref|NP_377151.1| - 0.044 13.8 0.1 0.072 13.1 0.1 1.4 1 0 0 1 1 1 0 CNP1-like family F420_oxidored PF03807.17 gi|15921482|ref|NP_377151.1| - 0.045 14.3 0.8 0.41 11.3 0.2 2.6 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent UDPG_MGDP_dh_N PF03721.14 gi|15921482|ref|NP_377151.1| - 0.058 13.0 3.6 0.13 11.8 1.1 2.6 2 1 0 2 2 2 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Peripla_BP_2 PF01497.18 gi|15921482|ref|NP_377151.1| - 0.076 12.6 0.6 4.3 6.8 0.0 3.1 3 1 1 4 4 4 0 Periplasmic binding protein Ub-RnfH PF03658.14 gi|15921482|ref|NP_377151.1| - 0.084 13.3 0.2 0.84 10.1 0.1 2.5 1 1 1 2 2 2 0 RnfH family Ubiquitin PTS_IIB PF02302.17 gi|15921482|ref|NP_377151.1| - 0.26 12.0 9.1 0.46 11.2 0.6 3.7 3 1 1 4 4 4 0 PTS system, Lactose/Cellobiose specific IIB subunit HhH-GPD PF00730.25 gi|15921483|ref|NP_377152.1| - 0.0029 18.0 0.0 0.0059 17.1 0.0 1.5 1 1 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein DUF3552 PF12072.8 gi|15921483|ref|NP_377152.1| - 0.078 12.4 0.0 0.12 11.7 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF3552) NAD_binding_8 PF13450.6 gi|15921487|ref|NP_377156.1| - 3.6e-05 23.9 0.0 0.00011 22.4 0.0 1.8 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain DAO PF01266.24 gi|15921487|ref|NP_377156.1| - 0.12 12.0 0.2 0.49 9.9 0.2 1.9 1 1 1 2 2 2 0 FAD dependent oxidoreductase 3HCDH_N PF02737.18 gi|15921487|ref|NP_377156.1| - 0.18 11.7 0.0 0.39 10.6 0.0 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain tRNA-synt_1 PF00133.22 gi|161751094|ref|NP_377157.2| - 2.5e-128 429.0 0.0 3.6e-127 425.1 0.0 2.0 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|161751094|ref|NP_377157.2| - 6.8e-31 107.3 0.4 1.5e-30 106.2 0.4 1.5 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|161751094|ref|NP_377157.2| - 9.9e-24 83.8 0.0 7.3e-11 41.4 0.0 3.6 3 0 0 3 3 3 3 tRNA synthetases class I (M) tRNA-synt_1_2 PF13603.6 gi|161751094|ref|NP_377157.2| - 5.4e-07 29.3 0.0 6.7e-05 22.5 0.0 2.9 1 1 2 3 3 3 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1e PF01406.19 gi|161751094|ref|NP_377157.2| - 0.014 14.8 0.0 2.1 7.6 0.0 2.5 2 0 0 2 2 2 0 tRNA synthetases class I (C) catalytic domain zf-TFIIB PF13453.6 gi|161751094|ref|NP_377157.2| - 0.069 12.5 0.1 4.9 6.6 0.0 2.6 2 0 0 2 2 2 0 Transcription factor zinc-finger Aminotran_1_2 PF00155.21 gi|15921489|ref|NP_377158.1| - 2.7e-74 250.5 0.0 3.1e-74 250.3 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II DegT_DnrJ_EryC1 PF01041.17 gi|15921489|ref|NP_377158.1| - 2.1e-10 40.5 0.0 1e-09 38.2 0.0 1.8 2 0 0 2 2 2 1 DegT/DnrJ/EryC1/StrS aminotransferase family Aminotran_5 PF00266.19 gi|15921489|ref|NP_377158.1| - 4.8e-07 29.1 0.0 1.5e-06 27.4 0.0 1.7 2 0 0 2 2 2 1 Aminotransferase class-V Cys_Met_Meta_PP PF01053.20 gi|15921489|ref|NP_377158.1| - 5.3e-06 25.2 0.0 1e-05 24.3 0.0 1.4 1 0 0 1 1 1 1 Cys/Met metabolism PLP-dependent enzyme Beta_elim_lyase PF01212.21 gi|15921489|ref|NP_377158.1| - 0.0016 17.7 0.0 0.0026 17.1 0.0 1.3 1 0 0 1 1 1 1 Beta-eliminating lyase TT1725 PF18324.1 gi|15921489|ref|NP_377158.1| - 0.004 17.2 0.1 8.5 6.5 0.0 3.2 3 0 0 3 3 3 2 Hypothetical protein TT1725 Aminotran_3 PF00202.21 gi|15921489|ref|NP_377158.1| - 0.014 14.1 0.0 0.021 13.5 0.0 1.3 1 0 0 1 1 1 0 Aminotransferase class-III Alliinase_C PF04864.13 gi|15921489|ref|NP_377158.1| - 0.015 14.2 0.3 1.5 7.7 0.1 2.2 2 0 0 2 2 2 0 Allinase IGPS PF00218.21 gi|15921490|ref|NP_377159.1| - 4.4e-73 245.6 1.5 5e-73 245.4 1.5 1.0 1 0 0 1 1 1 1 Indole-3-glycerol phosphate synthase His_biosynth PF00977.21 gi|15921490|ref|NP_377159.1| - 0.00026 20.5 0.3 0.0064 16.0 0.0 2.2 1 1 1 2 2 2 1 Histidine biosynthesis protein NMO PF03060.15 gi|15921490|ref|NP_377159.1| - 0.0076 15.7 0.0 0.083 12.3 0.0 2.0 2 0 0 2 2 2 1 Nitronate monooxygenase FMN_dh PF01070.18 gi|15921490|ref|NP_377159.1| - 0.013 14.5 0.0 2.4 7.1 0.0 2.1 2 0 0 2 2 2 0 FMN-dependent dehydrogenase ThiG PF05690.14 gi|15921490|ref|NP_377159.1| - 0.024 14.0 0.0 1.2 8.4 0.0 2.2 2 0 0 2 2 2 0 Thiazole biosynthesis protein ThiG TMP-TENI PF02581.17 gi|15921490|ref|NP_377159.1| - 0.048 13.0 0.2 0.22 10.9 0.1 2.0 1 1 1 2 2 2 0 Thiamine monophosphate synthase GATase PF00117.28 gi|15921491|ref|NP_377160.1| - 1.1e-47 162.3 0.0 1.2e-47 162.1 0.0 1.0 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|15921491|ref|NP_377160.1| - 1.3e-12 47.9 0.1 3.2e-12 46.7 0.1 1.6 1 1 0 1 1 1 1 Peptidase C26 Viral_cys_rich PF08008.12 gi|15921491|ref|NP_377160.1| - 0.0095 16.0 0.0 0.017 15.1 0.0 1.5 1 0 0 1 1 1 1 Viral cysteine rich Chorismate_bind PF00425.18 gi|15921492|ref|NP_377161.1| - 2.4e-92 309.1 0.0 3e-92 308.8 0.0 1.1 1 0 0 1 1 1 1 chorismate binding enzyme Anth_synt_I_N PF04715.13 gi|15921492|ref|NP_377161.1| - 1.6e-22 80.3 0.0 5.5e-22 78.5 0.0 1.9 2 0 0 2 2 2 1 Anthranilate synthase component I, N terminal region PRAI PF00697.22 gi|15921493|ref|NP_377162.1| - 1.8e-19 70.3 0.2 2.2e-19 70.0 0.2 1.0 1 0 0 1 1 1 1 N-(5'phosphoribosyl)anthranilate (PRA) isomerase Fe-S_biosyn PF01521.20 gi|15921493|ref|NP_377162.1| - 0.14 12.4 0.8 0.18 12.0 0.2 1.5 2 0 0 2 2 2 0 Iron-sulphur cluster biosynthesis Glycos_transf_3 PF00591.21 gi|15921494|ref|NP_377163.1| - 7.1e-77 258.4 0.0 1e-76 257.9 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family, a/b domain Glycos_trans_3N PF02885.17 gi|15921494|ref|NP_377163.1| - 4e-17 61.8 0.3 9.9e-17 60.5 0.3 1.7 1 0 0 1 1 1 1 Glycosyl transferase family, helical bundle domain Trp_syntA PF00290.20 gi|15921495|ref|NP_377164.1| - 2.3e-34 118.4 0.0 2.9e-34 118.1 0.0 1.0 1 0 0 1 1 1 1 Tryptophan synthase alpha chain His_biosynth PF00977.21 gi|15921495|ref|NP_377164.1| - 9e-06 25.3 0.3 2.4e-05 23.9 0.1 1.8 2 0 0 2 2 2 1 Histidine biosynthesis protein NMO PF03060.15 gi|15921495|ref|NP_377164.1| - 0.00021 20.8 0.0 0.00041 19.8 0.0 1.4 1 0 0 1 1 1 1 Nitronate monooxygenase TMP-TENI PF02581.17 gi|15921495|ref|NP_377164.1| - 0.023 14.0 0.0 0.056 12.8 0.0 1.6 2 0 0 2 2 2 0 Thiamine monophosphate synthase FMN_dh PF01070.18 gi|15921495|ref|NP_377164.1| - 0.057 12.4 0.0 0.096 11.7 0.0 1.3 1 0 0 1 1 1 0 FMN-dependent dehydrogenase Ribul_P_3_epim PF00834.19 gi|15921495|ref|NP_377164.1| - 0.1 12.0 0.0 0.15 11.5 0.0 1.4 1 0 0 1 1 1 0 Ribulose-phosphate 3 epimerase family PALP PF00291.25 gi|15921496|ref|NP_377165.1| - 3.5e-40 138.2 0.0 4.6e-40 137.9 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Acylphosphatase PF00708.18 gi|15921497|ref|NP_377166.1| - 2.5e-28 98.3 0.0 2.8e-28 98.2 0.0 1.0 1 0 0 1 1 1 1 Acylphosphatase Inos-1-P_synth PF01658.17 gi|15921498|ref|NP_377167.1| - 3e-32 111.1 0.0 5.3e-32 110.3 0.0 1.4 1 0 0 1 1 1 1 Myo-inositol-1-phosphate synthase NAD_binding_5 PF07994.12 gi|15921498|ref|NP_377167.1| - 0.12 11.7 0.0 0.27 10.6 0.0 1.6 2 0 0 2 2 2 0 Myo-inositol-1-phosphate synthase Sel1 PF08238.12 gi|15921498|ref|NP_377167.1| - 0.73 10.6 2.2 7.4 7.4 0.1 3.3 4 0 0 4 4 4 0 Sel1 repeat PPDK_N PF01326.19 gi|15921499|ref|NP_377168.1| - 5.2e-113 377.6 2.2 8.1e-113 377.0 2.2 1.3 1 0 0 1 1 1 1 Pyruvate phosphate dikinase, PEP/pyruvate binding domain PEP-utilizers_C PF02896.18 gi|15921499|ref|NP_377168.1| - 6e-82 275.1 0.0 9.8e-82 274.4 0.0 1.3 1 0 0 1 1 1 1 PEP-utilising enzyme, TIM barrel domain PEP-utilizers PF00391.23 gi|15921499|ref|NP_377168.1| - 9.6e-29 98.9 1.3 2.4e-28 97.7 1.3 1.7 1 0 0 1 1 1 1 PEP-utilising enzyme, mobile domain Snf7 PF03357.21 gi|15921500|ref|NP_377169.1| - 0.00031 20.4 4.6 0.00047 19.8 4.6 1.4 1 1 0 1 1 1 1 Snf7 LOH1CR12 PF10158.9 gi|15921500|ref|NP_377169.1| - 0.0063 16.5 0.2 0.012 15.7 0.2 1.6 1 0 0 1 1 1 1 Tumour suppressor protein BLOC1S3 PF15753.5 gi|15921500|ref|NP_377169.1| - 0.025 14.7 1.6 0.06 13.5 1.5 1.6 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex 1 subunit 3 DUF4125 PF13526.6 gi|15921500|ref|NP_377169.1| - 0.099 12.2 2.5 0.086 12.4 0.5 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF4125) UbiD PF01977.16 gi|15921502|ref|NP_377171.1| - 1.5e-124 416.0 0.0 1.7e-124 415.8 0.0 1.0 1 0 0 1 1 1 1 3-octaprenyl-4-hydroxybenzoate carboxy-lyase DUF1525 PF07511.11 gi|15921502|ref|NP_377171.1| - 0.02 15.1 0.0 2.7 8.1 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1525) PALP PF00291.25 gi|15921503|ref|NP_377172.1| - 1.5e-73 247.8 0.2 1.7e-73 247.6 0.2 1.0 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Prok-RING_1 PF14446.6 gi|15921503|ref|NP_377172.1| - 0.0075 16.2 0.8 0.013 15.5 0.8 1.3 1 0 0 1 1 1 1 Prokaryotic RING finger family 1 HypA PF01155.19 gi|15921503|ref|NP_377172.1| - 0.01 15.8 0.1 0.017 15.1 0.1 1.4 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn-ribbon_8 PF09723.10 gi|15921503|ref|NP_377172.1| - 0.012 15.8 0.1 0.02 15.0 0.1 1.4 1 0 0 1 1 1 0 Zinc ribbon domain A2L_zn_ribbon PF08792.10 gi|15921503|ref|NP_377172.1| - 0.017 14.8 1.5 0.45 10.3 0.2 2.3 2 0 0 2 2 2 0 A2L zinc ribbon domain RNA_POL_M_15KD PF02150.16 gi|15921503|ref|NP_377172.1| - 0.028 14.3 0.6 7.1 6.6 0.0 2.3 2 0 0 2 2 2 0 RNA polymerases M/15 Kd subunit PhnA_Zn_Ribbon PF08274.12 gi|15921503|ref|NP_377172.1| - 0.064 13.2 1.0 0.14 12.2 1.0 1.5 1 0 0 1 1 1 0 PhnA Zinc-Ribbon DNA_RNApol_7kD PF03604.13 gi|15921503|ref|NP_377172.1| - 0.064 12.9 2.1 0.13 12.0 2.1 1.4 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit TF_Zn_Ribbon PF08271.12 gi|15921503|ref|NP_377172.1| - 0.077 12.5 0.5 0.17 11.5 0.5 1.6 1 0 0 1 1 1 0 TFIIB zinc-binding zf-ribbon_3 PF13248.6 gi|15921503|ref|NP_377172.1| - 0.29 10.6 1.7 0.53 9.8 1.7 1.4 1 0 0 1 1 1 0 zinc-ribbon domain AA_kinase PF00696.28 gi|15921504|ref|NP_377173.1| - 5.7e-39 134.1 0.2 9.4e-39 133.4 0.2 1.4 1 0 0 1 1 1 1 Amino acid kinase family TBK1_CCD1 PF18394.1 gi|15921504|ref|NP_377173.1| - 0.03 13.9 1.1 0.76 9.3 0.0 2.2 2 0 0 2 2 2 0 TANK-binding kinase 1 coiled-coil domain 1 I_LWEQ PF01608.17 gi|15921504|ref|NP_377173.1| - 0.12 12.6 0.3 0.3 11.3 0.1 1.7 2 0 0 2 2 2 0 I/LWEQ domain DUF4712 PF15830.5 gi|15921504|ref|NP_377173.1| - 0.14 11.8 0.6 0.51 10.0 0.6 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4712) Semialdhyde_dh PF01118.24 gi|15921505|ref|NP_377174.1| - 2.1e-33 115.3 0.0 3.7e-33 114.5 0.0 1.4 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.18 gi|15921505|ref|NP_377174.1| - 8.7e-30 104.2 0.3 1.3e-29 103.6 0.3 1.3 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain DapB_N PF01113.20 gi|15921505|ref|NP_377174.1| - 0.0021 18.2 0.0 0.0041 17.2 0.0 1.5 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Gp_dh_C PF02800.20 gi|15921505|ref|NP_377174.1| - 0.0039 16.8 0.4 0.018 14.7 0.1 2.2 2 1 0 2 2 2 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain Ldh_1_N PF00056.23 gi|15921505|ref|NP_377174.1| - 0.01 15.9 0.1 0.024 14.7 0.1 1.7 1 0 0 1 1 1 0 lactate/malate dehydrogenase, NAD binding domain NAD_binding_3 PF03447.16 gi|15921505|ref|NP_377174.1| - 0.048 14.3 0.0 0.095 13.4 0.0 1.4 1 0 0 1 1 1 0 Homoserine dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 gi|15921505|ref|NP_377174.1| - 0.055 13.7 0.1 0.19 12.0 0.0 2.0 2 1 0 2 2 2 0 Saccharopine dehydrogenase NADP binding domain Epimerase PF01370.21 gi|15921505|ref|NP_377174.1| - 0.11 11.9 0.0 0.17 11.3 0.0 1.3 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family PHP_C PF13263.6 gi|15921506|ref|NP_377175.1| - 4.4e-14 52.0 0.0 9.1e-14 51.0 0.0 1.6 1 0 0 1 1 1 1 PHP-associated PHP PF02811.19 gi|15921506|ref|NP_377175.1| - 2.3e-06 28.0 0.0 8e-06 26.2 0.0 1.9 2 1 0 2 2 2 1 PHP domain B12-binding PF02310.19 gi|15921506|ref|NP_377175.1| - 0.039 14.0 0.0 0.084 12.9 0.0 1.5 1 0 0 1 1 1 0 B12 binding domain Nre_N PF04894.12 gi|15921507|ref|NP_377176.1| - 6.8e-96 321.2 0.2 8.7e-96 320.9 0.2 1.1 1 0 0 1 1 1 1 Archaeal Nre, N-terminal Nre_C PF04895.12 gi|15921507|ref|NP_377176.1| - 4.7e-33 113.4 0.1 9.2e-33 112.5 0.1 1.5 1 0 0 1 1 1 1 Archaeal Nre, C-terminal OTCace PF00185.24 gi|15921508|ref|NP_377177.1| - 1.8e-51 174.3 0.0 2.7e-51 173.7 0.0 1.2 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain OTCace_N PF02729.21 gi|15921508|ref|NP_377177.1| - 7.8e-47 159.0 0.0 1.3e-46 158.3 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DUF1327 PF07041.11 gi|15921508|ref|NP_377177.1| - 0.04 13.9 0.0 0.075 13.1 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1327) HTH_24 PF13412.6 gi|15921509|ref|NP_377178.1| - 0.0011 18.5 2.9 0.0016 18.0 0.5 2.5 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_45 PF14947.6 gi|15921509|ref|NP_377178.1| - 0.0018 18.2 0.3 0.0049 16.8 0.3 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_Crp_2 PF13545.6 gi|15921509|ref|NP_377178.1| - 0.0085 16.1 2.4 0.012 15.6 0.3 2.3 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain HTH_11 PF08279.12 gi|15921509|ref|NP_377178.1| - 0.03 14.2 0.4 0.03 14.2 0.4 2.4 3 0 0 3 3 3 0 HTH domain MarR PF01047.22 gi|15921509|ref|NP_377178.1| - 0.052 13.5 0.7 0.052 13.5 0.7 2.0 2 0 0 2 2 2 0 MarR family DUF5343 PF17278.2 gi|15921509|ref|NP_377178.1| - 0.053 13.6 0.1 0.1 12.7 0.1 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5343) PaaX PF07848.12 gi|15921509|ref|NP_377178.1| - 0.054 13.7 0.1 0.24 11.7 0.0 2.1 2 0 0 2 2 2 0 PaaX-like protein DUF3576 PF12100.8 gi|15921509|ref|NP_377178.1| - 0.084 13.0 0.5 1.7 8.8 0.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3576) Fe_dep_repress PF01325.19 gi|15921509|ref|NP_377178.1| - 0.12 12.6 0.2 0.36 11.0 0.0 1.9 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain Ribosomal_S19e PF01090.19 gi|15921509|ref|NP_377178.1| - 0.19 11.5 1.6 0.19 11.4 0.1 1.8 2 0 0 2 2 2 0 Ribosomal protein S19e CLZ PF16526.5 gi|15921509|ref|NP_377178.1| - 2.4 8.6 8.9 4.1 7.8 0.3 3.2 3 1 0 3 3 3 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels NAD_kinase PF01513.21 gi|15921510|ref|NP_377179.1| - 1.7e-75 253.9 0.1 1.9e-75 253.8 0.1 1.0 1 0 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.24 gi|15921510|ref|NP_377179.1| - 0.00012 21.7 0.1 0.00028 20.5 0.0 1.7 2 0 0 2 2 2 1 Diacylglycerol kinase catalytic domain DeoRC PF00455.22 gi|15921510|ref|NP_377179.1| - 0.073 13.0 0.0 0.18 11.7 0.0 1.6 2 0 0 2 2 2 0 DeoR C terminal sensor domain DsrD PF08679.11 gi|15921510|ref|NP_377179.1| - 0.086 13.1 0.2 0.28 11.5 0.0 2.0 2 0 0 2 2 2 0 Dissimilatory sulfite reductase D (DsrD) HTH_45 PF14947.6 gi|15921511|ref|NP_377180.1| - 1.2e-05 25.2 0.5 0.0011 18.9 0.0 2.6 2 1 0 2 2 2 1 Winged helix-turn-helix Methyltransf_9 PF08003.11 gi|15921511|ref|NP_377180.1| - 0.00099 18.1 1.2 0.0014 17.6 1.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1698) Rrf2 PF02082.20 gi|15921511|ref|NP_377180.1| - 0.0024 18.2 0.0 0.18 12.2 0.0 2.3 2 0 0 2 2 2 1 Transcriptional regulator SIL1 PF16782.5 gi|15921511|ref|NP_377180.1| - 0.0047 16.2 5.1 0.0064 15.7 5.1 1.2 1 0 0 1 1 1 1 Nucleotide exchange factor SIL1 MarR_2 PF12802.7 gi|15921511|ref|NP_377180.1| - 0.0051 16.7 0.0 0.011 15.6 0.0 1.5 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|15921511|ref|NP_377180.1| - 0.015 15.2 0.1 0.07 13.0 0.1 2.1 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB NEL PF14496.6 gi|15921511|ref|NP_377180.1| - 0.017 14.6 0.3 0.041 13.3 0.2 1.6 1 1 1 2 2 2 0 C-terminal novel E3 ligase, LRR-interacting FaeA PF04703.12 gi|15921511|ref|NP_377180.1| - 0.049 14.0 0.0 0.11 12.9 0.0 1.5 1 0 0 1 1 1 0 FaeA-like protein HTH_5 PF01022.20 gi|15921511|ref|NP_377180.1| - 0.058 13.3 0.0 0.14 12.1 0.0 1.7 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family AbiEi_4 PF13338.6 gi|15921511|ref|NP_377180.1| - 0.093 12.9 0.0 0.17 12.0 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin Rgp1 PF08737.10 gi|15921511|ref|NP_377180.1| - 0.098 11.8 3.2 0.13 11.4 3.2 1.1 1 0 0 1 1 1 0 Rgp1 Colicin_Pyocin PF01320.18 gi|15921511|ref|NP_377180.1| - 0.38 10.9 5.0 0.82 9.8 1.1 2.6 1 1 1 2 2 2 0 Colicin immunity protein / pyocin immunity protein DUF4344 PF14247.6 gi|15921512|ref|NP_377181.1| - 0.032 13.9 0.5 0.036 13.7 0.5 1.1 1 0 0 1 1 1 0 Putative metallopeptidase zinc-ribbons_6 PF07191.12 gi|15921514|ref|NP_377183.1| - 0.031 14.2 9.5 0.067 13.2 0.6 3.0 3 0 0 3 3 3 0 zinc-ribbons zf-CHY PF05495.12 gi|15921514|ref|NP_377183.1| - 0.64 10.6 9.9 1.9 9.0 1.2 3.0 3 0 0 3 3 3 0 CHY zinc finger DZR PF12773.7 gi|15921514|ref|NP_377183.1| - 0.76 9.9 11.2 2 8.5 0.5 3.2 2 1 0 2 2 2 0 Double zinc ribbon SR1P PF13790.6 gi|15921514|ref|NP_377183.1| - 1 9.5 11.3 18 5.5 0.1 4.3 4 0 0 4 4 4 0 SR1 protein Cpn60_TCP1 PF00118.24 gi|15921515|ref|NP_377184.1| - 1.8e-176 587.6 15.5 2e-176 587.4 15.5 1.0 1 0 0 1 1 1 1 TCP-1/cpn60 chaperonin family IFT20 PF14931.6 gi|15921515|ref|NP_377184.1| - 0.064 13.4 0.7 0.35 11.0 0.1 2.6 2 1 1 3 3 3 0 Intraflagellar transport complex B, subunit 20 DUF4056 PF13265.6 gi|15921517|ref|NP_377186.1| - 0.12 11.7 0.1 0.14 11.5 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4056) DpnI_C PF17726.1 gi|15921518|ref|NP_377187.1| - 0.011 15.9 0.0 0.054 13.6 0.0 2.0 1 1 1 2 2 2 0 Dam-replacing HTH domain DUF4423 PF14394.6 gi|15921518|ref|NP_377187.1| - 0.02 14.6 0.1 0.034 13.9 0.1 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4423) TrmB PF01978.19 gi|15921518|ref|NP_377187.1| - 0.021 14.7 0.9 0.026 14.4 0.1 1.5 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_9 PF08221.11 gi|15921518|ref|NP_377187.1| - 0.1 12.7 0.0 0.17 12.0 0.0 1.3 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain UPF0149 PF03695.13 gi|15921518|ref|NP_377187.1| - 0.12 12.7 0.0 0.17 12.2 0.0 1.4 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0149) DUF445 PF04286.12 gi|15921518|ref|NP_377187.1| - 0.17 11.6 3.1 0.19 11.5 3.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF445) DndB PF14072.6 gi|15921520|ref|NP_377189.1| - 0.12 11.5 0.0 0.12 11.5 0.0 1.0 1 0 0 1 1 1 0 DNA-sulfur modification-associated tRNA-synt_1d PF00750.19 gi|15921521|ref|NP_377190.1| - 1.1e-36 126.5 2.8 7.9e-34 117.1 2.8 2.2 1 1 0 1 1 1 1 tRNA synthetases class I (R) DALR_1 PF05746.15 gi|15921521|ref|NP_377190.1| - 1.3e-27 96.3 0.4 2.6e-26 92.1 0.0 2.6 2 0 0 2 2 2 1 DALR anticodon binding domain tRNA-synt_1g PF09334.11 gi|15921521|ref|NP_377190.1| - 0.00066 18.5 0.7 0.017 13.8 0.1 2.4 3 0 0 3 3 3 1 tRNA synthetases class I (M) tRNA-synt_1e PF01406.19 gi|15921521|ref|NP_377190.1| - 0.00075 18.9 1.9 0.049 13.0 0.4 2.8 2 1 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain Fungal_trans_2 PF11951.8 gi|15921521|ref|NP_377190.1| - 0.017 14.0 0.2 0.037 12.8 0.1 1.6 2 0 0 2 2 2 0 Fungal specific transcription factor domain tRNA-synt_1 PF00133.22 gi|15921521|ref|NP_377190.1| - 0.087 11.0 0.2 0.38 8.9 0.0 2.0 2 0 0 2 2 2 0 tRNA synthetases class I (I, L, M and V) PNPase PF03726.14 gi|15921521|ref|NP_377190.1| - 0.14 12.6 1.8 0.76 10.3 0.0 2.9 3 0 0 3 3 3 0 Polyribonucleotide nucleotidyltransferase, RNA binding domain Imm8 PF15586.6 gi|15921521|ref|NP_377190.1| - 0.34 10.9 2.8 0.5 10.4 0.3 2.3 2 0 0 2 2 2 0 Immunity protein 8 tRNA-synt_1f PF01921.18 gi|15921521|ref|NP_377190.1| - 0.37 9.6 2.6 0.77 8.6 1.1 2.3 2 1 0 2 2 2 0 tRNA synthetases class I (K) Ribonuc_red_lgC PF02867.15 gi|15921522|ref|NP_377191.1| - 1.7e-187 624.2 0.0 2.3e-187 623.7 0.0 1.2 1 0 0 1 1 1 1 Ribonucleotide reductase, barrel domain Ribonuc_red_lgN PF00317.21 gi|15921522|ref|NP_377191.1| - 2.1e-29 101.4 0.2 5e-29 100.1 0.2 1.7 1 0 0 1 1 1 1 Ribonucleotide reductase, all-alpha domain ATP-cone PF03477.16 gi|15921522|ref|NP_377191.1| - 2.2e-07 31.3 1.6 5.8e-07 30.0 0.3 2.5 2 0 0 2 2 2 1 ATP cone domain Phage_int_SAM_6 PF18644.1 gi|15921522|ref|NP_377191.1| - 0.027 14.5 0.1 20 5.2 0.0 3.8 4 0 0 4 4 4 0 Phage integrase SAM-like domain UPF0175 PF03683.13 gi|15921523|ref|NP_377192.1| - 0.00055 19.6 0.1 0.001 18.8 0.1 1.5 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0175) Sigma70_r4_2 PF08281.12 gi|15921523|ref|NP_377192.1| - 0.042 13.5 0.1 0.097 12.4 0.0 1.7 2 0 0 2 2 2 0 Sigma-70, region 4 HTH_23 PF13384.6 gi|15921523|ref|NP_377192.1| - 0.058 13.2 0.0 0.11 12.3 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain BACK PF07707.15 gi|15921524|ref|NP_377193.1| - 0.031 14.4 0.0 2.6 8.2 0.0 2.3 2 0 0 2 2 2 0 BTB And C-terminal Kelch PikAIV_N PF18605.1 gi|15921524|ref|NP_377193.1| - 0.81 9.3 2.2 1.8 8.2 1.2 2.0 2 0 0 2 2 2 0 Narbonolide/10-deoxymethynolide synthase PikA4 N-terminal domain GatB_N PF02934.15 gi|15921525|ref|NP_377194.1| - 1.1e-71 241.4 0.0 1.6e-71 240.9 0.0 1.2 1 0 0 1 1 1 1 GatB/GatE catalytic domain GatB_Yqey PF02637.18 gi|15921525|ref|NP_377194.1| - 1.8e-25 89.6 10.0 1.8e-25 89.6 10.0 2.0 2 0 0 2 2 2 1 GatB domain GAD PF02938.14 gi|15921525|ref|NP_377194.1| - 2.6e-12 46.8 0.6 9.3e-12 45.0 0.0 2.2 2 1 0 2 2 2 1 GAD domain YqeY PF09424.10 gi|15921525|ref|NP_377194.1| - 2.5e-07 30.8 2.7 5.2e-07 29.8 2.7 1.5 1 0 0 1 1 1 1 Yqey-like protein 4HB_MCP_1 PF12729.7 gi|15921525|ref|NP_377194.1| - 0.5 9.9 15.5 0.69 9.4 6.7 2.3 2 0 0 2 2 2 0 Four helix bundle sensory module for signal transduction DUF2179 PF10035.9 gi|15921525|ref|NP_377194.1| - 5.1 6.9 6.4 0.99 9.2 0.6 2.9 3 0 0 3 3 3 0 Uncharacterized protein conserved in bacteria (DUF2179) Asparaginase PF00710.20 gi|15921527|ref|NP_377196.1| - 9.4e-61 204.7 0.0 1.4e-60 204.2 0.0 1.2 1 0 0 1 1 1 1 Asparaginase, N-terminal Asparaginase_C PF17763.1 gi|15921527|ref|NP_377196.1| - 2.3e-31 108.4 0.0 7.7e-31 106.7 0.0 1.9 2 0 0 2 2 2 1 Glutaminase/Asparaginase C-terminal domain GatD_N PF18195.1 gi|15921527|ref|NP_377196.1| - 6.4e-19 67.0 3.3 1.3e-18 66.0 3.3 1.6 1 0 0 1 1 1 1 GatD N-terminal domain DUF2187 PF09953.9 gi|15921527|ref|NP_377196.1| - 0.038 14.0 0.1 0.1 12.6 0.1 1.7 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2187) RVT_thumb PF06817.14 gi|15921527|ref|NP_377196.1| - 0.071 13.0 0.1 0.72 9.7 0.0 2.3 2 0 0 2 2 2 0 Reverse transcriptase thumb domain Ribosomal_S30 PF04758.14 gi|15921528|ref|NP_377197.1| - 3.4e-14 52.7 5.4 4.2e-14 52.5 5.4 1.0 1 0 0 1 1 1 1 Ribosomal protein S30 Sas10 PF09368.10 gi|15921528|ref|NP_377197.1| - 0.039 14.4 5.6 0.048 14.1 5.6 1.3 1 0 0 1 1 1 0 Sas10 C-terminal domain Astro_capsid_N PF03115.14 gi|15921528|ref|NP_377197.1| - 0.85 8.2 4.6 0.85 8.2 4.6 1.0 1 0 0 1 1 1 0 Astrovirus capsid protein precursor Nop PF01798.18 gi|15921529|ref|NP_377198.1| - 1.9e-75 253.3 0.0 2.7e-75 252.8 0.0 1.2 1 0 0 1 1 1 1 snoRNA binding domain, fibrillarin Cytochrom_B558a PF05038.13 gi|15921529|ref|NP_377198.1| - 0.043 13.4 0.5 0.068 12.7 0.5 1.2 1 0 0 1 1 1 0 Cytochrome Cytochrome b558 alpha-subunit Fibrillarin PF01269.17 gi|15921530|ref|NP_377199.1| - 7.2e-104 345.8 0.0 8.5e-104 345.6 0.0 1.0 1 0 0 1 1 1 1 Fibrillarin PCMT PF01135.19 gi|15921530|ref|NP_377199.1| - 0.013 15.2 0.0 0.03 14.1 0.0 1.7 1 1 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) GCD14 PF08704.10 gi|15921530|ref|NP_377199.1| - 0.078 12.6 0.0 0.22 11.2 0.0 1.8 1 1 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit DUF61 PF01886.16 gi|15921531|ref|NP_377200.1| - 2e-18 66.6 0.5 2.5e-18 66.3 0.5 1.1 1 0 0 1 1 1 1 Protein of unknown function DUF61 TetR_C_10 PF16295.5 gi|15921531|ref|NP_377200.1| - 0.074 13.4 0.0 0.092 13.0 0.0 1.2 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain HTH_3 PF01381.22 gi|15921532|ref|NP_377201.1| - 1.6e-10 40.8 0.2 4.7e-10 39.4 0.1 1.8 2 0 0 2 2 2 1 Helix-turn-helix HTH_19 PF12844.7 gi|15921532|ref|NP_377201.1| - 1.8e-06 27.8 9.1 3e-06 27.2 0.1 3.9 3 1 0 3 3 3 1 Helix-turn-helix domain HTH_31 PF13560.6 gi|15921532|ref|NP_377201.1| - 1e-05 25.8 0.0 2.4e-05 24.6 0.0 1.6 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|15921532|ref|NP_377201.1| - 0.0045 16.8 0.1 0.023 14.5 0.0 2.1 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_22 PF13309.6 gi|15921532|ref|NP_377201.1| - 0.012 15.7 1.2 0.065 13.3 0.0 2.8 3 0 0 3 3 3 0 HTH domain HTH_23 PF13384.6 gi|15921532|ref|NP_377201.1| - 0.014 15.2 0.0 0.064 13.1 0.0 2.0 2 0 0 2 2 2 0 Homeodomain-like domain Phage_AlpA PF05930.12 gi|15921532|ref|NP_377201.1| - 0.027 14.3 0.1 0.17 11.8 0.0 2.1 2 0 0 2 2 2 0 Prophage CP4-57 regulatory protein (AlpA) HTH_17 PF12728.7 gi|15921532|ref|NP_377201.1| - 0.035 14.3 0.1 6.2 7.1 0.0 3.0 3 0 0 3 3 3 0 Helix-turn-helix domain UPF0175 PF03683.13 gi|15921532|ref|NP_377201.1| - 0.039 13.7 0.0 4.5 7.0 0.0 2.9 2 0 0 2 2 2 0 Uncharacterised protein family (UPF0175) Sigma70_r4 PF04545.16 gi|15921532|ref|NP_377201.1| - 0.099 12.2 0.0 0.6 9.7 0.0 2.2 2 0 0 2 2 2 0 Sigma-70, region 4 MerR PF00376.23 gi|15921532|ref|NP_377201.1| - 0.17 11.7 0.3 0.54 10.1 0.0 1.9 2 0 0 2 2 2 0 MerR family regulatory protein AHJR-like PF18743.1 gi|15921532|ref|NP_377201.1| - 1.2 8.7 6.9 9.9 5.7 1.6 2.9 2 1 0 2 2 2 0 REase_AHJR-like TRM PF02005.16 gi|15921533|ref|NP_377202.1| - 3.6e-86 289.7 0.0 4.3e-86 289.4 0.0 1.0 1 0 0 1 1 1 1 N2,N2-dimethylguanosine tRNA methyltransferase Met_10 PF02475.16 gi|15921533|ref|NP_377202.1| - 0.0081 15.9 0.1 0.016 15.0 0.0 1.5 2 0 0 2 2 2 1 Met-10+ like-protein MTS PF05175.14 gi|15921533|ref|NP_377202.1| - 0.05 13.2 0.0 0.091 12.3 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase small domain OrfB_Zn_ribbon PF07282.11 gi|15921533|ref|NP_377202.1| - 0.054 13.4 0.9 0.12 12.3 0.9 1.6 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Zn-ribbon_8 PF09723.10 gi|15921533|ref|NP_377202.1| - 0.42 10.8 7.5 1.2 9.3 7.5 1.8 1 0 0 1 1 1 0 Zinc ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|15921533|ref|NP_377202.1| - 3 7.9 6.6 3.6 7.7 0.3 2.4 1 1 0 2 2 2 0 Transposase zinc-ribbon domain RNA_pol_Rpc34 PF05158.12 gi|15921534|ref|NP_377203.1| - 1e-09 38.3 3.4 4.8e-06 26.2 1.6 2.0 1 1 1 2 2 2 2 RNA polymerase Rpc34 subunit HTH_24 PF13412.6 gi|15921534|ref|NP_377203.1| - 0.00053 19.5 1.2 0.0011 18.4 0.1 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding B-block_TFIIIC PF04182.12 gi|15921534|ref|NP_377203.1| - 0.0017 18.4 0.4 0.0028 17.8 0.4 1.3 1 0 0 1 1 1 1 B-block binding subunit of TFIIIC HTH_36 PF13730.6 gi|15921534|ref|NP_377203.1| - 0.028 14.4 0.2 0.068 13.1 0.2 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain DUF2802 PF10975.8 gi|15921534|ref|NP_377203.1| - 0.036 14.2 0.0 0.055 13.6 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2802) HTH_micro PF17007.5 gi|15921534|ref|NP_377203.1| - 0.037 12.8 1.4 0.045 12.6 1.4 1.1 1 0 0 1 1 1 0 HTH-like RepC PF06504.11 gi|15921534|ref|NP_377203.1| - 0.054 12.7 0.0 0.072 12.3 0.0 1.1 1 0 0 1 1 1 0 Replication protein C (RepC) MarR_2 PF12802.7 gi|15921534|ref|NP_377203.1| - 0.13 12.2 0.0 0.2 11.5 0.0 1.3 1 0 0 1 1 1 0 MarR family TFIIB PF00382.19 gi|15921535|ref|NP_377204.1| - 1.6e-24 85.7 0.1 6.8e-15 54.9 0.0 2.3 2 0 0 2 2 2 2 Transcription factor TFIIB repeat TF_Zn_Ribbon PF08271.12 gi|15921535|ref|NP_377204.1| - 1.1e-17 63.3 0.9 2e-17 62.4 0.9 1.5 1 0 0 1 1 1 1 TFIIB zinc-binding OrfB_Zn_ribbon PF07282.11 gi|15921535|ref|NP_377204.1| - 6.9e-05 22.7 0.2 0.0002 21.2 0.2 1.8 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Sigma70_r4 PF04545.16 gi|15921535|ref|NP_377204.1| - 8.1e-05 22.1 0.0 0.0063 16.0 0.0 2.5 2 0 0 2 2 2 1 Sigma-70, region 4 zf-RRN7 PF11781.8 gi|15921535|ref|NP_377204.1| - 0.0012 18.4 0.2 0.002 17.8 0.2 1.4 1 0 0 1 1 1 1 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 Ribosomal_S27e PF01667.17 gi|15921535|ref|NP_377204.1| - 0.0032 17.1 0.3 0.0059 16.3 0.3 1.3 1 0 0 1 1 1 1 Ribosomal protein S27 HTH_11 PF08279.12 gi|15921535|ref|NP_377204.1| - 0.0039 17.1 0.5 0.072 13.1 0.1 2.6 2 0 0 2 2 2 1 HTH domain Zn-ribbon_8 PF09723.10 gi|15921535|ref|NP_377204.1| - 0.0092 16.1 0.6 5 7.3 0.0 2.5 2 0 0 2 2 2 1 Zinc ribbon domain PhnA_Zn_Ribbon PF08274.12 gi|15921535|ref|NP_377204.1| - 0.011 15.6 1.0 0.022 14.7 1.0 1.4 1 0 0 1 1 1 0 PhnA Zinc-Ribbon zf-ribbon_3 PF13248.6 gi|15921535|ref|NP_377204.1| - 0.013 14.9 6.1 0.17 11.4 6.1 2.2 1 1 0 1 1 1 0 zinc-ribbon domain HTH_Mga PF08280.11 gi|15921535|ref|NP_377204.1| - 0.02 14.9 0.3 0.7 10.0 0.1 2.7 2 0 0 2 2 2 0 M protein trans-acting positive regulator (MGA) HTH domain HTH_10 PF04967.12 gi|15921535|ref|NP_377204.1| - 0.028 14.2 2.0 8.1 6.3 0.0 3.0 3 0 0 3 3 3 0 HTH DNA binding domain Zn_Tnp_IS1595 PF12760.7 gi|15921535|ref|NP_377204.1| - 0.028 14.4 0.3 0.056 13.4 0.3 1.4 1 0 0 1 1 1 0 Transposase zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|15921535|ref|NP_377204.1| - 0.029 14.1 3.9 3.5 7.5 1.2 2.4 2 0 0 2 2 2 0 zinc-ribbon domain A2L_zn_ribbon PF08792.10 gi|15921535|ref|NP_377204.1| - 0.033 13.9 3.1 0.078 12.7 3.1 1.6 1 0 0 1 1 1 0 A2L zinc ribbon domain Lar_restr_allev PF14354.6 gi|15921535|ref|NP_377204.1| - 0.041 14.3 0.1 0.078 13.4 0.1 1.5 1 0 0 1 1 1 0 Restriction alleviation protein Lar Phage_terminase PF10668.9 gi|15921535|ref|NP_377204.1| - 0.042 13.9 2.9 0.12 12.4 0.1 2.7 3 0 0 3 3 3 0 Phage terminase small subunit Sigma70_r4_2 PF08281.12 gi|15921535|ref|NP_377204.1| - 0.046 13.4 0.1 0.15 11.8 0.0 1.9 2 0 0 2 2 1 0 Sigma-70, region 4 Cyclin_C PF02984.19 gi|15921535|ref|NP_377204.1| - 0.051 13.7 0.5 0.46 10.6 0.1 2.3 1 1 0 2 2 2 0 Cyclin, C-terminal domain Prim_Zn_Ribbon PF08273.12 gi|15921535|ref|NP_377204.1| - 0.057 13.7 3.7 0.19 12.0 3.7 1.8 1 1 0 1 1 1 0 Zinc-binding domain of primase-helicase HTH_AsnC-type PF13404.6 gi|15921535|ref|NP_377204.1| - 0.063 13.1 0.0 0.22 11.4 0.0 1.9 1 0 0 1 1 1 0 AsnC-type helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 gi|15921535|ref|NP_377204.1| - 0.075 12.5 0.0 0.21 11.0 0.0 1.8 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 zf-ACC PF17848.1 gi|15921535|ref|NP_377204.1| - 0.1 12.7 1.5 0.24 11.5 1.5 1.7 1 0 0 1 1 1 0 Acetyl-coA carboxylase zinc finger domain DZR PF12773.7 gi|15921535|ref|NP_377204.1| - 0.11 12.5 0.4 0.23 11.5 0.4 1.4 1 0 0 1 1 1 0 Double zinc ribbon GerE PF00196.19 gi|15921535|ref|NP_377204.1| - 0.13 11.9 2.5 0.13 11.9 0.4 2.1 2 0 0 2 2 2 0 Bacterial regulatory proteins, luxR family HTH_23 PF13384.6 gi|15921535|ref|NP_377204.1| - 0.14 12.0 0.1 0.57 10.1 0.0 2.0 2 0 0 2 2 2 0 Homeodomain-like domain Rubredoxin_2 PF18073.1 gi|15921535|ref|NP_377204.1| - 0.14 11.9 2.8 4.9 7.0 0.3 2.4 2 0 0 2 2 2 0 Rubredoxin metal binding domain DUF2089 PF09862.9 gi|15921535|ref|NP_377204.1| - 0.15 12.1 0.0 0.15 12.1 0.0 2.8 4 0 0 4 4 4 0 Protein of unknown function (DUF2089) Nudix_N_2 PF14803.6 gi|15921535|ref|NP_377204.1| - 0.16 11.9 0.5 0.61 10.1 0.5 2.0 1 1 0 1 1 1 0 Nudix N-terminal DUF2396 PF09654.10 gi|15921535|ref|NP_377204.1| - 0.16 12.1 0.2 6.6 6.8 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF2396) DNA_RNApol_7kD PF03604.13 gi|15921535|ref|NP_377204.1| - 0.17 11.6 2.0 5.3 6.8 0.1 2.5 2 0 0 2 2 2 0 DNA directed RNA polymerase, 7 kDa subunit zf-TFIIB PF13453.6 gi|15921535|ref|NP_377204.1| - 0.32 10.4 1.2 0.64 9.4 1.2 1.5 1 0 0 1 1 1 0 Transcription factor zinc-finger HTH_19 PF12844.7 gi|15921535|ref|NP_377204.1| - 0.35 10.9 4.1 2.5 8.2 0.2 3.3 3 1 0 3 3 3 0 Helix-turn-helix domain TFIIS_C PF01096.18 gi|15921535|ref|NP_377204.1| - 0.49 10.3 1.9 13 5.7 0.1 2.4 2 0 0 2 2 2 0 Transcription factor S-II (TFIIS) Rubredoxin PF00301.20 gi|15921535|ref|NP_377204.1| - 0.59 10.2 2.3 5.6 7.1 0.3 2.4 2 0 0 2 2 2 0 Rubredoxin Zn_ribbon_SprT PF17283.2 gi|15921535|ref|NP_377204.1| - 4.2 7.4 4.8 19 5.2 0.7 2.3 1 1 1 2 2 2 0 SprT-like zinc ribbon domain Gar1 PF04410.14 gi|15921536|ref|NP_377205.1| - 7.3e-05 22.6 0.0 7.6e-05 22.5 0.0 1.2 1 0 0 1 1 1 1 Gar1/Naf1 RNA binding region PRC PF05239.16 gi|15921536|ref|NP_377205.1| - 0.0044 17.1 0.1 0.0065 16.5 0.1 1.3 1 0 0 1 1 1 1 PRC-barrel domain DUF1664 PF07889.12 gi|15921537|ref|NP_377206.1| - 0.00099 19.1 45.3 0.0015 18.5 8.1 4.5 1 1 4 5 5 5 2 Protein of unknown function (DUF1664) Atg14 PF10186.9 gi|15921537|ref|NP_377206.1| - 0.0023 17.1 21.0 0.0023 17.1 21.0 3.1 1 1 2 3 3 3 2 Vacuolar sorting 38 and autophagy-related subunit 14 EzrA PF06160.12 gi|15921537|ref|NP_377206.1| - 0.0029 15.9 59.2 0.038 12.2 23.9 2.2 1 1 1 2 2 2 2 Septation ring formation regulator, EzrA HBM PF16591.5 gi|15921537|ref|NP_377206.1| - 0.031 13.7 35.0 0.49 9.8 8.1 3.2 1 1 2 3 3 3 0 Helical bimodular sensor domain DUF948 PF06103.11 gi|15921537|ref|NP_377206.1| - 0.056 13.7 19.5 0.31 11.3 3.2 3.9 2 2 2 4 4 4 0 Bacterial protein of unknown function (DUF948) Lebercilin PF15619.6 gi|15921537|ref|NP_377206.1| - 0.083 12.5 76.2 0.033 13.8 15.7 3.5 1 1 1 3 3 3 0 Ciliary protein causing Leber congenital amaurosis disease Fez1 PF06818.15 gi|15921537|ref|NP_377206.1| - 0.25 11.8 59.1 0.025 15.1 25.3 2.7 1 1 1 2 2 2 0 Fez1 Spc7 PF08317.11 gi|15921537|ref|NP_377206.1| - 0.31 9.9 72.5 0.087 11.7 27.4 3.1 1 1 2 3 3 3 0 Spc7 kinetochore protein TPR_MLP1_2 PF07926.12 gi|15921537|ref|NP_377206.1| - 0.31 11.1 66.4 0.071 13.2 10.2 5.0 1 1 4 5 5 5 0 TPR/MLP1/MLP2-like protein HAP1_N PF04849.13 gi|15921537|ref|NP_377206.1| - 0.5 9.5 65.6 0.078 12.2 22.2 3.1 1 1 1 3 3 3 0 HAP1 N-terminal conserved region Sec34 PF04136.15 gi|15921537|ref|NP_377206.1| - 0.52 10.2 39.5 0.76 9.6 8.8 4.1 1 1 3 4 4 4 0 Sec34-like family Mod_r PF07200.13 gi|15921537|ref|NP_377206.1| - 0.8 9.8 61.4 0.029 14.5 19.0 4.4 1 1 2 3 3 3 0 Modifier of rudimentary (Mod(r)) protein CENP-F_leu_zip PF10473.9 gi|15921537|ref|NP_377206.1| - 1.2 9.2 75.3 0.11 12.5 27.1 3.6 1 1 2 4 4 4 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF3584 PF12128.8 gi|15921537|ref|NP_377206.1| - 1.5 6.3 58.7 1.1 6.7 29.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3584) DUF4763 PF15960.5 gi|15921537|ref|NP_377206.1| - 2.5 7.3 51.1 0.15 11.4 16.1 3.4 1 1 0 2 2 2 0 Domain of unknown function (DUF4763) ATG16 PF08614.11 gi|15921537|ref|NP_377206.1| - 2.7 8.2 61.4 1.3 9.3 14.6 4.4 1 1 2 3 3 3 0 Autophagy protein 16 (ATG16) IFT57 PF10498.9 gi|15921537|ref|NP_377206.1| - 8.5 5.2 59.5 0.065 12.2 23.2 2.9 1 1 1 2 2 2 0 Intra-flagellar transport protein 57 DUF373 PF04123.13 gi|15921538|ref|NP_377207.1| - 7.9e-87 291.8 23.7 9.7e-87 291.5 23.7 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF373) DPM3 PF08285.11 gi|15921538|ref|NP_377207.1| - 5.3 7.3 17.0 27 5.1 4.7 3.4 2 1 1 3 3 3 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) TBP PF00352.21 gi|15921539|ref|NP_377208.1| - 1.8e-53 178.4 0.3 6.5e-30 102.9 0.1 2.0 2 0 0 2 2 2 2 Transcription factor TFIID (or TATA-binding protein, TBP) DUF3378 PF11858.8 gi|15921539|ref|NP_377208.1| - 4.9e-07 29.8 0.0 0.015 15.4 0.0 2.4 1 1 2 3 3 3 2 Domain of unknown function (DUF3378) DUF155 PF02582.14 gi|15921539|ref|NP_377208.1| - 0.04 14.0 0.3 8.9 6.4 0.0 2.2 2 0 0 2 2 2 0 Uncharacterised ACR, YagE family COG1723 Metallophos PF00149.28 gi|15921540|ref|NP_377209.1| - 1.4e-06 28.9 1.4 4.8e-06 27.2 1.5 1.6 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|15921540|ref|NP_377209.1| - 0.00017 21.8 0.0 0.00028 21.1 0.0 1.4 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain Ta0938 PF11494.8 gi|15921540|ref|NP_377209.1| - 0.12 12.7 0.1 0.26 11.6 0.1 1.6 1 0 0 1 1 1 0 Ta0938 TP_methylase PF00590.20 gi|15921541|ref|NP_377210.1| - 9.6e-24 84.5 0.0 1.3e-23 84.1 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases DUF357 PF04010.13 gi|15921542|ref|NP_377211.1| - 1.7e-19 69.7 0.9 4.5e-19 68.3 0.3 2.0 2 0 0 2 2 2 1 Protein of unknown function (DUF357) CTP_transf_like PF01467.26 gi|15921542|ref|NP_377211.1| - 3.3e-17 63.0 0.1 5.8e-17 62.2 0.1 1.4 1 0 0 1 1 1 1 Cytidylyltransferase-like DUF883 PF05957.13 gi|15921542|ref|NP_377211.1| - 0.1 13.2 0.8 0.49 11.0 0.1 2.2 3 0 0 3 3 3 0 Bacterial protein of unknown function (DUF883) Lambda_Kil PF06301.11 gi|15921542|ref|NP_377211.1| - 0.16 11.6 0.0 0.3 10.7 0.0 1.4 1 0 0 1 1 1 0 Bacteriophage lambda Kil protein CTP-dep_RFKase PF01982.16 gi|15921543|ref|NP_377212.1| - 5.7e-40 136.2 0.0 6.4e-40 136.0 0.0 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF120 MazE_antitoxin PF04014.18 gi|15921543|ref|NP_377212.1| - 0.24 11.4 2.4 0.27 11.2 0.1 2.2 2 0 0 2 2 2 0 Antidote-toxin recognition MazE, bacterial antitoxin Wyosine_form PF08608.12 gi|15921545|ref|NP_377214.1| - 4.2e-23 81.5 0.0 7.6e-23 80.6 0.0 1.4 1 0 0 1 1 1 1 Wyosine base formation Radical_SAM PF04055.21 gi|15921545|ref|NP_377214.1| - 9.3e-22 78.2 0.0 1.9e-21 77.1 0.0 1.5 1 0 0 1 1 1 1 Radical SAM superfamily SF3a60_bindingd PF12108.8 gi|15921545|ref|NP_377214.1| - 5.1 7.1 5.2 1.4 8.9 1.2 2.2 2 0 0 2 2 2 0 Splicing factor SF3a60 binding domain Amidase PF01425.21 gi|15921546|ref|NP_377215.1| - 2e-146 488.5 0.0 2.3e-146 488.3 0.0 1.0 1 0 0 1 1 1 1 Amidase MRP-S33 PF08293.11 gi|15921546|ref|NP_377215.1| - 0.17 12.2 2.9 0.15 12.3 0.8 2.0 2 0 0 2 2 2 0 Mitochondrial ribosomal subunit S27 Glu-tRNAGln PF02686.15 gi|15921548|ref|NP_377217.1| - 1.8e-19 69.8 0.1 2.3e-19 69.4 0.1 1.1 1 0 0 1 1 1 1 Glu-tRNAGln amidotransferase C subunit CagS PF16707.5 gi|15921548|ref|NP_377217.1| - 0.028 14.4 1.5 1 9.3 0.6 2.0 1 1 1 2 2 2 0 Cag pathogenicity island protein S of Helicobacter pylori CutA1 PF03091.15 gi|15921549|ref|NP_377218.1| - 4.4e-34 116.3 0.1 5e-34 116.1 0.1 1.0 1 0 0 1 1 1 1 CutA1 divalent ion tolerance protein DUF4091 PF13320.6 gi|15921550|ref|NP_377219.1| - 0.094 12.9 0.1 0.25 11.5 0.0 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4091) ERCC3_RAD25_C PF16203.5 gi|15921551|ref|NP_377220.1| - 1.5e-25 89.9 1.2 3.1e-25 88.8 0.2 2.0 2 1 1 3 3 3 1 ERCC3/RAD25/XPB C-terminal helicase ResIII PF04851.15 gi|15921551|ref|NP_377220.1| - 7.5e-25 87.9 0.0 7.5e-25 87.9 0.0 2.3 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 gi|15921551|ref|NP_377220.1| - 3e-20 72.6 1.0 1.4e-19 70.4 0.2 2.4 2 0 0 2 2 2 1 Helicase conserved C-terminal domain SNF2_N PF00176.23 gi|15921551|ref|NP_377220.1| - 6e-09 35.1 0.3 3.5e-07 29.3 0.0 2.3 1 1 1 2 2 2 2 SNF2 family N-terminal domain DEAD PF00270.29 gi|15921551|ref|NP_377220.1| - 5.2e-08 32.9 0.8 1.7e-07 31.2 0.1 2.3 2 1 0 2 2 2 1 DEAD/DEAH box helicase AAA_22 PF13401.6 gi|15921551|ref|NP_377220.1| - 1.3e-05 25.5 0.1 0.00013 22.3 0.0 2.5 3 0 0 3 3 3 1 AAA domain DUF2075 PF09848.9 gi|15921551|ref|NP_377220.1| - 6e-05 22.4 0.2 0.00011 21.6 0.2 1.4 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_11 PF13086.6 gi|15921551|ref|NP_377220.1| - 0.0072 16.1 1.0 5.5 6.7 0.0 3.1 2 1 0 3 3 3 1 AAA domain AAA_30 PF13604.6 gi|15921551|ref|NP_377220.1| - 0.034 13.9 0.0 0.46 10.2 0.0 2.7 3 1 0 3 3 3 0 AAA domain Sigma70_ECF PF07638.11 gi|15921551|ref|NP_377220.1| - 0.043 13.7 0.1 0.079 12.8 0.1 1.4 1 0 0 1 1 1 0 ECF sigma factor XPB_DRD PF18458.1 gi|15921551|ref|NP_377220.1| - 0.072 13.0 0.1 0.18 11.7 0.1 1.7 1 0 0 1 1 1 0 Xeroderma pigmentosum group B helicase damage recognition domain Helicase_RecD PF05127.14 gi|15921551|ref|NP_377220.1| - 0.087 12.7 0.4 0.31 10.9 0.0 2.1 2 1 0 2 2 2 0 Helicase Alba PF01918.21 gi|15921554|ref|NP_377223.1| - 9.9e-23 79.8 0.8 1.3e-22 79.3 0.8 1.2 1 0 0 1 1 1 1 Alba DUF3954 PF13128.6 gi|15921554|ref|NP_377223.1| - 0.066 13.0 0.3 0.26 11.1 0.3 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF3954) Topoisom_bac PF01131.20 gi|15921555|ref|NP_377224.1| - 1.3e-73 248.3 0.3 2.9e-73 247.2 0.3 1.6 1 1 0 1 1 1 1 DNA topoisomerase Toprim PF01751.22 gi|15921555|ref|NP_377224.1| - 1.3e-23 83.2 0.5 8.5e-23 80.5 0.0 2.6 3 0 0 3 3 2 1 Toprim domain zf_Rg PF17915.1 gi|15921555|ref|NP_377224.1| - 5e-11 41.8 1.1 5e-11 41.8 1.1 2.2 2 0 0 2 2 2 1 Reverse gyrase zinc finger DEAD PF00270.29 gi|15921555|ref|NP_377224.1| - 2.1e-07 30.9 0.0 1.5e-06 28.1 0.0 2.5 1 1 0 1 1 1 1 DEAD/DEAH box helicase ResIII PF04851.15 gi|15921555|ref|NP_377224.1| - 2.9e-06 27.4 0.1 0.0011 19.0 0.0 2.7 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit AAA_22 PF13401.6 gi|15921555|ref|NP_377224.1| - 0.0022 18.3 0.1 0.026 14.8 0.0 2.4 2 0 0 2 2 2 1 AAA domain Toprim_4 PF13662.6 gi|15921555|ref|NP_377224.1| - 0.0032 17.9 0.0 0.01 16.3 0.0 1.9 1 0 0 1 1 1 1 Toprim domain zf-ribbon_3 PF13248.6 gi|15921555|ref|NP_377224.1| - 0.0048 16.3 2.4 0.0048 16.3 2.4 2.6 3 0 0 3 3 2 2 zinc-ribbon domain DZR PF12773.7 gi|15921555|ref|NP_377224.1| - 0.0076 16.3 6.5 0.0094 16.0 0.6 2.3 2 0 0 2 2 2 1 Double zinc ribbon zinc_ribbon_9 PF14369.6 gi|15921555|ref|NP_377224.1| - 0.021 15.1 1.1 0.021 15.1 1.1 2.5 2 0 0 2 2 2 0 zinc-ribbon Zn-ribbon_8 PF09723.10 gi|15921555|ref|NP_377224.1| - 0.11 12.7 8.1 0.25 11.5 1.6 2.6 2 0 0 2 2 2 0 Zinc ribbon domain zf-C3HC4_3 PF13920.6 gi|15921555|ref|NP_377224.1| - 0.14 12.0 1.8 0.6 10.0 0.7 2.2 2 0 0 2 2 2 0 Zinc finger, C3HC4 type (RING finger) FYVE PF01363.21 gi|15921555|ref|NP_377224.1| - 0.17 12.1 0.0 0.44 10.7 0.0 1.6 1 0 0 1 1 1 0 FYVE zinc finger Nop10p PF04135.12 gi|15921555|ref|NP_377224.1| - 2.3 8.3 3.9 1.6 8.8 0.8 2.1 2 0 0 2 2 2 0 Nucleolar RNA-binding protein, Nop10p family zf-H2C2_2 PF13465.6 gi|15921555|ref|NP_377224.1| - 2.4 8.7 5.5 12 6.6 1.2 2.8 2 0 0 2 2 2 0 Zinc-finger double domain Alba PF01918.21 gi|15921556|ref|NP_377225.1| - 2.6e-15 56.0 0.1 3.2e-15 55.7 0.1 1.2 1 0 0 1 1 1 1 Alba DEAD PF00270.29 gi|15921557|ref|NP_377226.1| - 2.5e-30 105.5 0.0 9.4e-30 103.7 0.0 1.9 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|15921557|ref|NP_377226.1| - 3.1e-15 56.5 0.0 9e-14 51.8 0.0 2.7 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|15921557|ref|NP_377226.1| - 1.8e-08 34.6 0.0 5.4e-08 33.0 0.0 1.8 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD_assoc PF08494.11 gi|15921557|ref|NP_377226.1| - 8.6e-06 25.7 0.0 0.023 14.5 0.0 2.5 1 1 0 1 1 1 1 DEAD/H associated SNF2_N PF00176.23 gi|15921557|ref|NP_377226.1| - 0.0004 19.2 0.0 0.00082 18.2 0.0 1.5 1 0 0 1 1 1 1 SNF2 family N-terminal domain HTH_20 PF12840.7 gi|15921557|ref|NP_377226.1| - 0.002 18.1 0.0 0.0055 16.7 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain UvrD-helicase PF00580.21 gi|15921557|ref|NP_377226.1| - 0.0051 16.4 0.1 1.3 8.5 0.0 2.9 2 2 0 3 3 3 1 UvrD/REP helicase N-terminal domain HTH_3 PF01381.22 gi|15921557|ref|NP_377226.1| - 0.033 14.2 0.3 0.73 9.9 0.1 2.9 2 0 0 2 2 2 0 Helix-turn-helix HTH_5 PF01022.20 gi|15921557|ref|NP_377226.1| - 0.038 13.9 0.1 0.11 12.4 0.1 1.8 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_10 PF04967.12 gi|15921557|ref|NP_377226.1| - 0.074 12.9 0.2 0.31 10.9 0.0 2.1 2 0 0 2 2 2 0 HTH DNA binding domain AAA_22 PF13401.6 gi|15921557|ref|NP_377226.1| - 0.1 12.9 0.0 11 6.3 0.0 2.7 2 0 0 2 2 2 0 AAA domain AvrM_N PF18247.1 gi|15921557|ref|NP_377226.1| - 0.13 12.2 0.8 0.45 10.5 0.1 2.3 2 0 0 2 2 2 0 Flax-rust effector AvrM N-terminal domain HTH_17 PF12728.7 gi|15921557|ref|NP_377226.1| - 0.15 12.3 2.9 0.55 10.5 0.1 3.3 3 0 0 3 3 3 0 Helix-turn-helix domain LacI PF00356.21 gi|15921557|ref|NP_377226.1| - 0.27 11.0 3.1 4 7.3 0.0 3.6 4 0 0 4 4 4 0 Bacterial regulatory proteins, lacI family RtcB PF01139.17 gi|15921558|ref|NP_377227.1| - 1.2e-161 538.5 0.1 1.4e-161 538.4 0.1 1.0 1 0 0 1 1 1 1 tRNA-splicing ligase RtcB Trehalose_PPase PF02358.16 gi|15921558|ref|NP_377227.1| - 0.26 10.4 0.9 0.56 9.3 0.1 1.9 2 0 0 2 2 2 0 Trehalose-phosphatase DS PF01916.17 gi|15921559|ref|NP_377228.1| - 9.7e-102 340.1 0.0 1.2e-101 339.8 0.0 1.0 1 0 0 1 1 1 1 Deoxyhypusine synthase Topo-VIb_trans PF09239.11 gi|15921560|ref|NP_377229.1| - 9.1e-67 223.8 0.4 1.7e-66 222.9 0.4 1.5 1 0 0 1 1 1 1 Topoisomerase VI B subunit, transducer HATPase_c PF02518.26 gi|15921560|ref|NP_377229.1| - 1.8e-10 41.3 0.0 3.1e-10 40.6 0.0 1.4 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase HATPase_c_3 PF13589.6 gi|15921560|ref|NP_377229.1| - 5e-10 39.3 0.0 1.1e-09 38.3 0.0 1.5 1 0 0 1 1 1 1 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FbpA PF05833.11 gi|15921560|ref|NP_377229.1| - 1.2e-05 24.3 0.0 1.2e-05 24.3 0.0 2.2 2 1 0 2 2 2 1 Fibronectin-binding protein A N-terminus (FbpA) Ribosomal_S13 PF00416.22 gi|15921560|ref|NP_377229.1| - 2.4e-05 24.7 0.0 8.3e-05 23.0 0.0 1.9 1 0 0 1 1 1 1 Ribosomal protein S13/S18 HGD-D PF06050.13 gi|15921560|ref|NP_377229.1| - 0.11 12.3 1.5 0.18 11.5 0.3 1.9 2 0 0 2 2 2 0 2-hydroxyglutaryl-CoA dehydratase, D-component TP6A_N PF04406.14 gi|15921561|ref|NP_377230.1| - 1.4e-20 73.0 0.1 2.6e-20 72.2 0.1 1.5 1 0 0 1 1 1 1 Type IIB DNA topoisomerase DUF2812 PF11193.8 gi|15921561|ref|NP_377230.1| - 0.13 12.5 3.2 0.41 10.9 2.8 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF2812) DUF2399 PF09664.10 gi|15921561|ref|NP_377230.1| - 0.18 11.7 0.0 0.32 10.9 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function C-terminus (DUF2399) eIF-5a PF01287.20 gi|15921562|ref|NP_377231.1| - 9.2e-09 35.3 0.6 1.7e-08 34.4 0.6 1.5 1 0 0 1 1 1 1 Eukaryotic elongation factor 5A hypusine, DNA-binding OB fold EFP_N PF08207.12 gi|15921562|ref|NP_377231.1| - 1.3e-06 28.4 0.2 5e-06 26.5 0.1 2.0 2 0 0 2 2 2 1 Elongation factor P (EF-P) KOW-like domain EFP PF01132.20 gi|15921562|ref|NP_377231.1| - 0.017 15.1 0.1 0.035 14.1 0.1 1.6 1 0 0 1 1 1 0 Elongation factor P (EF-P) OB domain SRP54 PF00448.22 gi|60623872|ref|NP_377232.2| - 8.4e-73 244.2 0.1 1.3e-72 243.6 0.1 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP_SPB PF02978.19 gi|60623872|ref|NP_377232.2| - 4.8e-33 113.7 1.6 4.5e-30 104.2 0.1 2.6 2 0 0 2 2 2 2 Signal peptide binding domain SRP54_N PF02881.19 gi|60623872|ref|NP_377232.2| - 1.4e-13 50.9 3.4 1.7e-13 50.6 0.7 2.7 2 1 0 2 2 2 1 SRP54-type protein, helical bundle domain CbiA PF01656.23 gi|60623872|ref|NP_377232.2| - 6.5e-06 26.2 0.0 5.4e-05 23.3 0.0 2.5 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain cobW PF02492.19 gi|60623872|ref|NP_377232.2| - 9e-06 25.4 0.3 8.1e-05 22.3 0.2 2.4 2 1 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain AAA_33 PF13671.6 gi|60623872|ref|NP_377232.2| - 4.6e-05 23.6 0.0 0.0001 22.5 0.0 1.6 1 0 0 1 1 1 1 AAA domain ParA PF10609.9 gi|60623872|ref|NP_377232.2| - 0.00017 21.2 0.1 0.0003 20.3 0.1 1.4 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase Zeta_toxin PF06414.12 gi|60623872|ref|NP_377232.2| - 0.0003 20.1 0.0 0.0006 19.1 0.0 1.4 1 0 0 1 1 1 1 Zeta toxin AAA_30 PF13604.6 gi|60623872|ref|NP_377232.2| - 0.00069 19.4 0.0 0.0016 18.2 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_31 PF13614.6 gi|60623872|ref|NP_377232.2| - 0.00083 19.3 1.3 0.027 14.4 0.2 2.7 1 1 1 2 2 2 1 AAA domain MeaB PF03308.16 gi|60623872|ref|NP_377232.2| - 0.0015 17.5 0.4 0.0047 16.0 0.4 1.8 1 1 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB PFOR_II PF17147.4 gi|60623872|ref|NP_377232.2| - 0.0019 18.5 0.4 0.029 14.6 0.1 3.0 2 2 1 3 3 3 1 Pyruvate:ferredoxin oxidoreductase core domain II MobB PF03205.14 gi|60623872|ref|NP_377232.2| - 0.0029 17.5 0.1 0.007 16.3 0.1 1.6 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_18 PF13238.6 gi|60623872|ref|NP_377232.2| - 0.0044 17.6 0.0 0.012 16.1 0.0 1.9 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|60623872|ref|NP_377232.2| - 0.0076 16.0 0.0 0.019 14.7 0.0 1.7 1 0 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|60623872|ref|NP_377232.2| - 0.0085 16.4 0.0 0.023 15.0 0.0 1.7 1 0 0 1 1 1 1 AAA domain ArsA_ATPase PF02374.15 gi|60623872|ref|NP_377232.2| - 0.0099 15.1 0.9 9.5 5.3 0.1 3.5 3 0 0 3 3 3 0 Anion-transporting ATPase G-alpha PF00503.20 gi|60623872|ref|NP_377232.2| - 0.014 14.6 0.0 0.059 12.5 0.0 1.7 1 1 0 1 1 1 0 G-protein alpha subunit AAA_17 PF13207.6 gi|60623872|ref|NP_377232.2| - 0.019 15.4 0.1 0.075 13.5 0.1 2.1 1 0 0 1 1 1 0 AAA domain APS_kinase PF01583.20 gi|60623872|ref|NP_377232.2| - 0.04 13.8 0.1 0.12 12.3 0.0 1.8 2 0 0 2 2 2 0 Adenylylsulphate kinase PAH PF02671.21 gi|60623872|ref|NP_377232.2| - 0.055 13.6 0.9 13 6.0 0.0 3.4 3 0 0 3 3 3 0 Paired amphipathic helix repeat AAA_28 PF13521.6 gi|60623872|ref|NP_377232.2| - 0.057 13.7 0.0 0.11 12.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain NTPase_1 PF03266.15 gi|60623872|ref|NP_377232.2| - 0.074 13.0 0.4 0.31 10.9 0.1 2.2 2 0 0 2 2 2 0 NTPase ATP_bind_1 PF03029.17 gi|60623872|ref|NP_377232.2| - 0.075 12.8 1.5 0.16 11.7 0.3 2.3 2 1 0 2 2 2 0 Conserved hypothetical ATP binding protein MipZ PF09140.11 gi|60623872|ref|NP_377232.2| - 0.082 12.2 0.2 3.9 6.7 0.2 2.3 1 1 0 1 1 1 0 ATPase MipZ ResIII PF04851.15 gi|60623872|ref|NP_377232.2| - 0.084 12.9 1.8 0.44 10.5 0.2 2.7 2 1 0 3 3 3 0 Type III restriction enzyme, res subunit AAA_16 PF13191.6 gi|60623872|ref|NP_377232.2| - 0.094 13.1 0.0 0.25 11.7 0.0 1.8 1 0 0 1 1 1 0 AAA ATPase domain NACHT PF05729.12 gi|60623872|ref|NP_377232.2| - 0.21 11.5 0.5 0.43 10.5 0.5 1.5 1 0 0 1 1 1 0 NACHT domain AAA PF00004.29 gi|60623872|ref|NP_377232.2| - 0.78 10.2 5.8 2.1 8.8 0.7 3.5 2 1 1 3 3 2 0 ATPase family associated with various cellular activities (AAA) Snapin_Pallidin PF14712.6 gi|60623872|ref|NP_377232.2| - 1.2 9.6 6.1 2.5 8.6 0.5 2.8 2 1 0 2 2 2 0 Snapin/Pallidin Thymidylate_kin PF02223.17 gi|60623872|ref|NP_377232.2| - 7.8 6.1 7.1 1.5 8.4 0.5 3.1 4 1 1 5 5 3 0 Thymidylate kinase adh_short_C2 PF13561.6 gi|15921565|ref|NP_377234.1| - 9.5e-43 146.4 0.0 1.3e-42 146.0 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|15921565|ref|NP_377234.1| - 3.2e-38 131.2 0.0 3.9e-38 130.9 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|15921565|ref|NP_377234.1| - 2.1e-05 24.5 0.0 3.5e-05 23.8 0.0 1.3 1 0 0 1 1 1 1 KR domain DUF1776 PF08643.10 gi|15921565|ref|NP_377234.1| - 0.001 18.5 0.1 0.0029 17.0 0.0 1.7 2 0 0 2 2 2 1 Fungal family of unknown function (DUF1776) F420_oxidored PF03807.17 gi|15921565|ref|NP_377234.1| - 0.013 16.1 0.0 0.033 14.8 0.0 1.7 2 0 0 2 2 2 0 NADP oxidoreductase coenzyme F420-dependent Shikimate_DH PF01488.20 gi|15921565|ref|NP_377234.1| - 0.028 14.5 0.0 0.058 13.5 0.0 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Polysacc_synt_2 PF02719.15 gi|15921565|ref|NP_377234.1| - 0.043 12.9 0.2 0.099 11.8 0.1 1.6 2 0 0 2 2 2 0 Polysaccharide biosynthesis protein Sacchrp_dh_NADP PF03435.18 gi|15921565|ref|NP_377234.1| - 0.048 13.9 0.0 0.12 12.6 0.0 1.6 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain THF_DHG_CYH_C PF02882.19 gi|15921565|ref|NP_377234.1| - 0.18 11.1 0.1 0.33 10.3 0.1 1.4 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AA_kinase PF00696.28 gi|15921566|ref|NP_377235.1| - 5.3e-33 114.6 0.6 2.7e-32 112.3 0.6 1.8 1 1 0 1 1 1 1 Amino acid kinase family DUF188 PF02639.14 gi|15921566|ref|NP_377235.1| - 0.064 12.9 0.1 0.22 11.2 0.0 1.9 2 0 0 2 2 2 0 Uncharacterized BCR, YaiI/YqxD family COG1671 HMGL-like PF00682.19 gi|15921567|ref|NP_377236.1| - 7.7e-72 242.0 3.7 1.2e-71 241.4 3.7 1.3 1 0 0 1 1 1 1 HMGL-like AsnC_trans_reg PF01037.21 gi|15921567|ref|NP_377236.1| - 3.1e-17 62.3 0.3 1.2e-15 57.2 0.1 3.1 3 0 0 3 3 3 1 Lrp/AsnC ligand binding domain ACT_4 PF13291.6 gi|15921567|ref|NP_377236.1| - 8.1e-05 23.1 3.3 0.046 14.3 0.1 4.6 4 1 1 5 5 5 1 ACT domain NapD PF03927.13 gi|15921567|ref|NP_377236.1| - 0.00056 19.9 0.5 0.0027 17.7 0.2 2.3 2 0 0 2 2 2 1 NapD protein AP_endonuc_2 PF01261.24 gi|15921567|ref|NP_377236.1| - 0.0015 18.0 0.3 0.0096 15.4 0.2 2.1 1 1 1 2 2 2 1 Xylose isomerase-like TIM barrel Spt5-NGN PF03439.13 gi|15921567|ref|NP_377236.1| - 0.025 14.5 0.3 0.8 9.7 0.1 2.6 2 0 0 2 2 2 0 Early transcription elongation factor of RNA pol II, NGN section P2 PF07194.11 gi|15921567|ref|NP_377236.1| - 0.053 13.6 0.9 1.9 8.6 0.1 3.0 3 1 1 4 4 4 0 P2 response regulator binding domain FtsX_ECD PF18075.1 gi|15921567|ref|NP_377236.1| - 0.055 14.1 2.3 27 5.5 0.1 3.8 4 1 0 4 4 3 0 FtsX extracellular domain SurA_N_2 PF13623.6 gi|15921567|ref|NP_377236.1| - 0.07 13.0 0.0 0.15 12.0 0.0 1.4 1 0 0 1 1 1 0 SurA N-terminal domain CinA_KH PF18146.1 gi|15921567|ref|NP_377236.1| - 0.083 13.1 0.1 0.98 9.6 0.0 2.7 2 1 1 3 3 3 0 Damage-inducible protein CinA KH domain Glyco_hydro_97 PF10566.9 gi|15921567|ref|NP_377236.1| - 0.093 12.0 0.1 0.21 10.8 0.0 1.5 2 0 0 2 2 2 0 Glycoside hydrolase 97 DUF5615 PF18480.1 gi|15921568|ref|NP_377237.1| - 7.3e-05 22.4 0.1 7.5e-05 22.4 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5615) PIN PF01850.21 gi|15921568|ref|NP_377237.1| - 0.00021 21.8 0.1 0.00022 21.7 0.1 1.1 1 0 0 1 1 1 1 PIN domain RHH_1 PF01402.21 gi|15921569|ref|NP_377238.1| - 0.0065 16.4 0.7 0.17 11.9 0.4 2.9 2 1 0 2 2 2 1 Ribbon-helix-helix protein, copG family DUF1241 PF06840.11 gi|15921569|ref|NP_377238.1| - 0.077 12.6 0.6 0.12 12.0 0.3 1.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1241) RNA_pol_3_Rpc31 PF11705.8 gi|15921569|ref|NP_377238.1| - 0.1 12.9 0.4 0.12 12.6 0.4 1.0 1 0 0 1 1 1 0 DNA-directed RNA polymerase III subunit Rpc31 Rib_5-P_isom_A PF06026.14 gi|15921570|ref|NP_377239.1| - 7.5e-41 139.6 0.1 9.5e-41 139.3 0.1 1.1 1 0 0 1 1 1 1 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) DeoRC PF00455.22 gi|15921570|ref|NP_377239.1| - 0.02 14.8 0.0 0.033 14.1 0.0 1.4 1 0 0 1 1 1 0 DeoR C terminal sensor domain UPRTase PF14681.6 gi|15921570|ref|NP_377239.1| - 0.058 12.8 0.0 0.092 12.2 0.0 1.3 1 0 0 1 1 1 0 Uracil phosphoribosyltransferase Sugar-bind PF04198.13 gi|15921570|ref|NP_377239.1| - 0.079 12.1 0.0 0.12 11.5 0.0 1.2 1 0 0 1 1 1 0 Putative sugar-binding domain DUF5097 PF17020.5 gi|15921570|ref|NP_377239.1| - 0.097 13.0 1.5 0.41 11.0 0.0 2.5 3 0 0 3 3 3 0 Domain of unknown function (DUF5097) DUF2067 PF09840.9 gi|15921570|ref|NP_377239.1| - 0.12 11.9 3.2 4 7.0 0.1 2.7 3 0 0 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2067) PaREP1 PF05942.11 gi|15921572|ref|NP_377241.1| - 3.6e-35 120.4 7.1 5.3e-35 119.8 7.1 1.3 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family DUF5618 PF18498.1 gi|15921572|ref|NP_377241.1| - 0.0059 16.8 3.2 0.01 16.0 3.2 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF5618) DUF357 PF04010.13 gi|15921572|ref|NP_377241.1| - 0.007 16.4 0.9 0.019 15.0 0.4 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF357) DUF241 PF03087.14 gi|15921572|ref|NP_377241.1| - 0.0078 16.1 0.4 0.0078 16.1 0.4 1.4 2 0 0 2 2 2 1 Arabidopsis protein of unknown function E3_UbLigase_EDD PF11547.8 gi|15921572|ref|NP_377241.1| - 0.13 12.0 0.1 0.29 10.8 0.1 1.5 1 0 0 1 1 1 0 E3 ubiquitin ligase EDD HEPN PF05168.14 gi|15921572|ref|NP_377241.1| - 0.49 10.5 6.4 1.1 9.4 5.7 1.9 1 1 0 1 1 1 0 HEPN domain SesA PF17107.5 gi|15921573|ref|NP_377242.1| - 0.075 13.2 0.1 0.27 11.4 0.1 1.9 1 1 0 1 1 1 0 N-terminal domain on NACHT_NTPase and P-loop NTPases Sulfolobus_pRN PF05584.11 gi|15921574|ref|NP_377243.1| - 4.4e-44 148.4 6.6 4.9e-44 148.2 6.6 1.0 1 0 0 1 1 1 1 Sulfolobus plasmid regulatory protein ArsR PF09824.9 gi|15921574|ref|NP_377243.1| - 0.0014 18.3 0.0 0.0016 18.0 0.0 1.1 1 0 0 1 1 1 1 ArsR transcriptional regulator MarR PF01047.22 gi|15921574|ref|NP_377243.1| - 0.004 17.0 0.4 0.0063 16.4 0.3 1.5 1 1 0 1 1 1 1 MarR family HTH_20 PF12840.7 gi|15921574|ref|NP_377243.1| - 0.028 14.5 0.1 0.035 14.2 0.1 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_5 PF01022.20 gi|15921574|ref|NP_377243.1| - 0.033 14.1 0.2 0.046 13.6 0.2 1.2 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family TFIIE_alpha PF02002.17 gi|15921574|ref|NP_377243.1| - 0.035 14.0 0.4 0.038 13.8 0.4 1.1 1 0 0 1 1 1 0 TFIIE alpha subunit HTH_IclR PF09339.10 gi|15921574|ref|NP_377243.1| - 0.046 13.5 0.5 0.063 13.1 0.5 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_24 PF13412.6 gi|15921574|ref|NP_377243.1| - 0.072 12.7 0.3 0.11 12.1 0.3 1.4 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Helicase_C_2 PF13307.6 gi|15921578|ref|NP_377247.1| - 2.1e-25 89.9 0.0 1.9e-24 86.8 0.0 2.1 2 0 0 2 2 2 1 Helicase C-terminal domain DEAD_2 PF06733.15 gi|15921578|ref|NP_377247.1| - 4.8e-14 52.4 3.6 2.4e-13 50.1 3.6 2.0 1 1 0 1 1 1 1 DEAD_2 ResIII PF04851.15 gi|15921578|ref|NP_377247.1| - 5.3e-06 26.5 0.0 1.7e-05 24.9 0.0 1.9 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|15921578|ref|NP_377247.1| - 0.00058 19.7 0.4 1.7 8.4 0.1 3.1 3 0 0 3 3 3 2 DEAD/DEAH box helicase AAA_22 PF13401.6 gi|15921578|ref|NP_377247.1| - 0.016 15.5 0.9 6.5 7.0 0.1 2.5 2 0 0 2 2 2 0 AAA domain SNF2_N PF00176.23 gi|15921578|ref|NP_377247.1| - 0.034 12.9 0.1 0.16 10.6 0.0 1.9 1 1 0 2 2 2 0 SNF2 family N-terminal domain AAA_19 PF13245.6 gi|15921578|ref|NP_377247.1| - 0.055 13.8 0.0 0.21 11.9 0.0 2.1 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|15921578|ref|NP_377247.1| - 0.074 13.4 0.1 0.2 12.0 0.1 1.8 1 1 0 1 1 1 0 AAA ATPase domain AAA PF00004.29 gi|15921578|ref|NP_377247.1| - 0.24 11.8 1.1 4.3 7.8 0.1 2.6 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) ParBc PF02195.18 gi|15921579|ref|NP_377248.1| - 5e-12 46.0 0.4 2.7e-11 43.6 0.0 2.5 2 1 1 3 3 3 1 ParB-like nuclease domain HTH_24 PF13412.6 gi|15921581|ref|NP_377250.1| - 0.0011 18.5 0.0 0.0022 17.5 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|15921581|ref|NP_377250.1| - 0.0016 18.2 0.0 0.0023 17.8 0.0 1.2 1 0 0 1 1 1 1 MarR family TrmB PF01978.19 gi|15921581|ref|NP_377250.1| - 0.0025 17.7 0.0 0.0033 17.3 0.0 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.12 gi|15921581|ref|NP_377250.1| - 0.007 16.3 0.0 0.013 15.4 0.0 1.6 1 0 0 1 1 1 1 HTH domain MarR PF01047.22 gi|15921581|ref|NP_377250.1| - 0.01 15.8 0.0 0.015 15.3 0.0 1.2 1 0 0 1 1 1 0 MarR family HTH_34 PF13601.6 gi|15921581|ref|NP_377250.1| - 0.01 16.0 0.6 0.012 15.7 0.1 1.4 2 0 0 2 2 2 0 Winged helix DNA-binding domain Rrf2 PF02082.20 gi|15921581|ref|NP_377250.1| - 0.03 14.7 0.0 0.041 14.2 0.0 1.3 1 0 0 1 1 1 0 Transcriptional regulator HTH_27 PF13463.6 gi|15921582|ref|NP_377251.1| - 1.1e-06 29.0 0.1 1.5e-06 28.6 0.1 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.19 gi|15921582|ref|NP_377251.1| - 1.9e-05 24.5 1.3 3e-05 23.8 1.3 1.5 1 1 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HxlR PF01638.17 gi|15921582|ref|NP_377251.1| - 0.0057 16.5 0.3 0.0076 16.1 0.3 1.2 1 0 0 1 1 1 1 HxlR-like helix-turn-helix MarR_2 PF12802.7 gi|15921582|ref|NP_377251.1| - 0.01 15.7 0.0 0.039 13.8 0.0 1.9 1 1 0 1 1 1 0 MarR family Fe_dep_repress PF01325.19 gi|15921582|ref|NP_377251.1| - 0.012 15.8 0.5 0.12 12.6 0.2 2.4 2 1 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain HTH_34 PF13601.6 gi|15921582|ref|NP_377251.1| - 0.015 15.5 0.2 0.02 15.0 0.2 1.3 1 1 0 1 1 1 0 Winged helix DNA-binding domain RTP PF02334.16 gi|15921582|ref|NP_377251.1| - 0.016 15.8 0.5 0.02 15.5 0.5 1.1 1 0 0 1 1 1 0 Replication terminator protein PadR PF03551.14 gi|15921582|ref|NP_377251.1| - 0.027 14.4 0.4 0.039 13.9 0.4 1.4 1 1 0 1 1 1 0 Transcriptional regulator PadR-like family HTH_24 PF13412.6 gi|15921582|ref|NP_377251.1| - 0.033 13.7 2.3 1.7 8.3 0.0 2.4 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding SMC_ScpB PF04079.16 gi|15921582|ref|NP_377251.1| - 0.045 13.4 0.1 0.057 13.0 0.1 1.3 1 0 0 1 1 1 0 Segregation and condensation complex subunit ScpB DUF1495 PF07381.11 gi|15921582|ref|NP_377251.1| - 0.048 13.5 0.1 0.075 12.9 0.1 1.6 1 1 0 1 1 1 0 Winged helix DNA-binding domain (DUF1495) DUF4364 PF14277.6 gi|15921582|ref|NP_377251.1| - 0.067 12.9 0.0 0.12 12.1 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4364) SWIM PF04434.17 gi|15921583|ref|NP_377252.1| - 0.038 13.7 0.2 0.059 13.0 0.2 1.3 1 0 0 1 1 1 0 SWIM zinc finger DUF1286 PF06939.11 gi|15921587|ref|NP_377256.1| - 2.5e-46 156.5 6.2 2.5e-46 156.5 6.2 1.7 2 0 0 2 2 2 1 Protein of unknown function (DUF1286) YdjM PF04307.14 gi|15921587|ref|NP_377256.1| - 5.3e-05 22.6 3.6 8.5e-05 21.9 3.6 1.4 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase DUF4184 PF13803.6 gi|15921587|ref|NP_377256.1| - 0.22 11.2 4.3 0.4 10.3 0.1 2.3 2 1 1 3 3 3 0 Domain of unknown function (DUF4184) TrmB PF01978.19 gi|15921588|ref|NP_377257.1| - 5.9e-05 22.9 0.1 7.7e-05 22.5 0.1 1.1 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB DUF4423 PF14394.6 gi|15921588|ref|NP_377257.1| - 0.0053 16.5 0.0 0.006 16.3 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_5 PF01022.20 gi|15921588|ref|NP_377257.1| - 0.021 14.7 0.0 0.032 14.1 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family Rrf2 PF02082.20 gi|15921588|ref|NP_377257.1| - 0.022 15.1 0.1 0.039 14.3 0.0 1.4 2 0 0 2 2 2 0 Transcriptional regulator HTH_25 PF13413.6 gi|15921588|ref|NP_377257.1| - 0.025 14.4 0.1 0.043 13.7 0.1 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_20 PF12840.7 gi|15921588|ref|NP_377257.1| - 0.049 13.7 0.0 0.63 10.1 0.0 2.0 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_24 PF13412.6 gi|15921588|ref|NP_377257.1| - 0.094 12.3 1.4 0.25 10.9 0.2 2.1 2 0 0 2 2 2 0 Winged helix-turn-helix DNA-binding HTH_23 PF13384.6 gi|15921588|ref|NP_377257.1| - 0.16 11.8 0.0 0.27 11.1 0.0 1.3 1 0 0 1 1 1 0 Homeodomain-like domain AAA_10 PF12846.7 gi|15921589|ref|NP_377258.1| - 2.5e-16 59.6 0.0 9.3e-08 31.4 0.0 2.3 2 0 0 2 2 2 2 AAA-like domain DUF87 PF01935.17 gi|15921589|ref|NP_377258.1| - 8.4e-10 39.1 0.1 3.7e-09 37.0 0.0 2.0 2 0 0 2 2 2 1 Helicase HerA, central domain AAA_22 PF13401.6 gi|15921589|ref|NP_377258.1| - 0.00075 19.8 0.0 0.018 15.3 0.0 2.3 2 0 0 2 2 2 1 AAA domain T2SSE PF00437.20 gi|15921589|ref|NP_377258.1| - 0.0035 16.5 0.0 0.024 13.7 0.0 2.0 2 0 0 2 2 2 1 Type II/IV secretion system protein DUF853 PF05872.12 gi|15921589|ref|NP_377258.1| - 0.005 15.5 0.0 0.089 11.4 0.0 2.1 2 0 0 2 2 2 1 Bacterial protein of unknown function (DUF853) AAA_5 PF07728.14 gi|15921589|ref|NP_377258.1| - 0.018 15.0 0.2 0.18 11.8 0.0 2.5 3 0 0 3 3 3 0 AAA domain (dynein-related subfamily) FtsK_SpoIIIE PF01580.18 gi|15921589|ref|NP_377258.1| - 0.018 14.4 0.0 0.037 13.4 0.0 1.4 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_7 PF12775.7 gi|15921589|ref|NP_377258.1| - 0.021 14.3 0.0 0.039 13.5 0.0 1.3 1 0 0 1 1 1 0 P-loop containing dynein motor region ABC_tran PF00005.27 gi|15921589|ref|NP_377258.1| - 0.027 15.0 0.0 0.092 13.3 0.0 1.9 2 0 0 2 2 2 0 ABC transporter Sigma54_activat PF00158.26 gi|15921589|ref|NP_377258.1| - 0.031 14.0 0.0 0.13 12.0 0.0 2.0 2 0 0 2 2 2 0 Sigma-54 interaction domain Pox_A32 PF04665.12 gi|15921589|ref|NP_377258.1| - 0.031 13.7 0.0 0.057 12.9 0.0 1.3 1 0 0 1 1 1 0 Poxvirus A32 protein TrwB_AAD_bind PF10412.9 gi|15921589|ref|NP_377258.1| - 0.046 12.6 0.0 0.62 8.9 0.0 2.2 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain AAA PF00004.29 gi|15921589|ref|NP_377258.1| - 0.1 13.0 0.5 0.42 11.0 0.1 2.3 3 0 0 3 3 2 0 ATPase family associated with various cellular activities (AAA) Steroid_dh PF02544.16 gi|15921590|ref|NP_377259.1| - 0.063 13.3 0.4 0.16 12.0 0.0 1.8 2 0 0 2 2 2 0 3-oxo-5-alpha-steroid 4-dehydrogenase PrgI PF12666.7 gi|15921590|ref|NP_377259.1| - 0.48 11.2 6.6 3.1 8.6 0.9 2.2 2 0 0 2 2 2 0 PrgI family protein Patched PF02460.18 gi|15921590|ref|NP_377259.1| - 1 7.3 6.4 1.5 6.8 6.4 1.1 1 0 0 1 1 1 0 Patched family Phage_holin_5_2 PF16079.5 gi|15921590|ref|NP_377259.1| - 1.1 9.7 11.6 0.051 13.9 3.1 2.7 3 1 0 3 3 3 0 Phage holin family Hol44, in holin superfamily V HTH_27 PF13463.6 gi|15921597|ref|NP_377266.1| - 2.6e-05 24.6 0.0 3.8e-05 24.1 0.0 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_34 PF13601.6 gi|15921597|ref|NP_377266.1| - 5e-05 23.4 0.4 6.1e-05 23.1 0.4 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain PadR PF03551.14 gi|15921597|ref|NP_377266.1| - 6.3e-05 22.9 0.2 0.0001 22.2 0.1 1.5 1 1 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_24 PF13412.6 gi|15921597|ref|NP_377266.1| - 0.00015 21.2 0.0 0.00025 20.5 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|15921597|ref|NP_377266.1| - 0.00016 21.5 1.2 0.00037 20.3 0.6 1.7 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB HxlR PF01638.17 gi|15921597|ref|NP_377266.1| - 0.00017 21.4 0.2 0.00018 21.3 0.2 1.2 1 0 0 1 1 1 1 HxlR-like helix-turn-helix MarR_2 PF12802.7 gi|15921597|ref|NP_377266.1| - 0.0004 20.2 0.0 0.00052 19.8 0.0 1.2 1 0 0 1 1 1 1 MarR family GntR PF00392.21 gi|15921597|ref|NP_377266.1| - 0.00071 19.2 0.2 0.0014 18.3 0.1 1.5 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family DUF1495 PF07381.11 gi|15921597|ref|NP_377266.1| - 0.001 18.9 0.4 0.011 15.5 0.4 2.0 1 1 0 1 1 1 1 Winged helix DNA-binding domain (DUF1495) MarR PF01047.22 gi|15921597|ref|NP_377266.1| - 0.001 18.9 0.1 0.0014 18.5 0.1 1.2 1 0 0 1 1 1 1 MarR family LexA_DNA_bind PF01726.16 gi|15921597|ref|NP_377266.1| - 0.003 17.3 0.4 0.078 12.8 0.2 2.7 2 1 0 2 2 2 1 LexA DNA binding domain DUF4364 PF14277.6 gi|15921597|ref|NP_377266.1| - 0.0034 17.2 0.2 0.0043 16.8 0.2 1.3 1 1 0 1 1 1 1 Domain of unknown function (DUF4364) HTH_45 PF14947.6 gi|15921597|ref|NP_377266.1| - 0.0062 16.5 0.7 0.0085 16.0 0.5 1.5 1 1 0 1 1 1 1 Winged helix-turn-helix DUF2250 PF10007.9 gi|15921597|ref|NP_377266.1| - 0.01 15.9 0.7 0.022 14.9 0.7 1.6 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_11 PF08279.12 gi|15921597|ref|NP_377266.1| - 0.02 14.8 1.0 0.03 14.3 0.1 1.7 2 1 0 2 2 2 0 HTH domain Phage_rep_org_N PF09681.10 gi|15921597|ref|NP_377266.1| - 0.021 14.8 0.1 0.028 14.3 0.1 1.2 1 0 0 1 1 1 0 N-terminal phage replisome organiser (Phage_rep_org_N) RQC PF09382.10 gi|15921597|ref|NP_377266.1| - 0.046 13.5 0.3 0.37 10.6 0.1 1.9 1 1 1 2 2 2 0 RQC domain U1snRNP70_N PF12220.8 gi|15921597|ref|NP_377266.1| - 0.083 13.5 0.6 0.1 13.3 0.6 1.1 1 0 0 1 1 1 0 U1 small nuclear ribonucleoprotein of 70kDa MW N terminal Rrf2 PF02082.20 gi|15921598|ref|NP_377267.1| - 2.9e-05 24.3 0.4 4.9e-05 23.6 0.4 1.3 1 0 0 1 1 1 1 Transcriptional regulator HTH_11 PF08279.12 gi|15921598|ref|NP_377267.1| - 9.5e-05 22.3 0.7 0.00018 21.4 0.7 1.5 1 0 0 1 1 1 1 HTH domain MarR PF01047.22 gi|15921598|ref|NP_377267.1| - 0.00016 21.5 0.2 0.00027 20.8 0.2 1.3 1 0 0 1 1 1 1 MarR family GntR PF00392.21 gi|15921598|ref|NP_377267.1| - 0.00056 19.5 0.1 0.00096 18.8 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family PheRS_DBD1 PF18552.1 gi|15921598|ref|NP_377267.1| - 0.00079 19.1 0.6 0.0013 18.5 0.6 1.3 1 0 0 1 1 1 1 PheRS DNA binding domain 1 HTH_5 PF01022.20 gi|15921598|ref|NP_377267.1| - 0.0012 18.6 0.5 0.0025 17.6 0.5 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|15921598|ref|NP_377267.1| - 0.0018 18.1 0.3 0.0027 17.6 0.3 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_34 PF13601.6 gi|15921598|ref|NP_377267.1| - 0.0031 17.7 0.7 0.0039 17.3 0.7 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain TBPIP PF07106.13 gi|15921598|ref|NP_377267.1| - 0.0055 16.6 1.2 0.0089 16.0 1.2 1.4 1 0 0 1 1 1 1 TBPIP/Hop2 winged helix domain MarR_2 PF12802.7 gi|15921598|ref|NP_377267.1| - 0.0065 16.3 0.0 0.01 15.7 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|15921598|ref|NP_377267.1| - 0.0076 15.8 0.8 0.012 15.2 0.8 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Fe_dep_repress PF01325.19 gi|15921598|ref|NP_377267.1| - 0.011 15.9 0.2 0.018 15.3 0.2 1.4 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain PadR PF03551.14 gi|15921598|ref|NP_377267.1| - 0.011 15.7 0.1 0.014 15.4 0.1 1.3 1 0 0 1 1 1 0 Transcriptional regulator PadR-like family HrcA_DNA-bdg PF03444.15 gi|15921598|ref|NP_377267.1| - 0.029 14.0 0.6 0.061 13.0 0.6 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix transcription repressor, HrcA DNA-binding S10_plectin PF03501.15 gi|15921598|ref|NP_377267.1| - 0.032 14.3 0.3 0.12 12.5 0.3 1.8 1 1 0 1 1 1 0 Plectin/S10 domain TFIIE_alpha PF02002.17 gi|15921598|ref|NP_377267.1| - 0.04 13.8 4.1 0.047 13.5 4.1 1.2 1 0 0 1 1 1 0 TFIIE alpha subunit Penicillinase_R PF03965.16 gi|15921598|ref|NP_377267.1| - 0.043 14.2 1.5 0.094 13.1 0.6 1.8 1 1 1 2 2 2 0 Penicillinase repressor HTH_Crp_2 PF13545.6 gi|15921598|ref|NP_377267.1| - 0.058 13.4 0.2 0.094 12.7 0.1 1.5 1 1 0 1 1 1 0 Crp-like helix-turn-helix domain SPAN-X PF07458.12 gi|15921598|ref|NP_377267.1| - 0.066 13.7 0.3 0.092 13.2 0.3 1.3 1 0 0 1 1 1 0 Sperm protein associated with nucleus, mapped to X chromosome Put_DNA-bind_N PF06971.13 gi|15921598|ref|NP_377267.1| - 0.079 13.0 0.2 0.32 11.0 0.0 2.0 1 1 1 2 2 2 0 Putative DNA-binding protein N-terminus ParBc PF02195.18 gi|15921599|ref|NP_377268.1| - 8.9e-07 29.1 0.0 4.2e-06 27.0 0.0 2.2 2 0 0 2 2 2 1 ParB-like nuclease domain Suv3_N PF18114.1 gi|15921599|ref|NP_377268.1| - 0.016 15.3 3.5 0.041 14.0 0.1 3.1 3 1 1 4 4 4 0 Suv3 helical N-terminal domain CSTF_C PF14304.6 gi|15921599|ref|NP_377268.1| - 0.043 13.4 0.5 0.19 11.3 0.1 2.2 2 0 0 2 2 2 0 Transcription termination and cleavage factor C-terminal HisKA_2 PF07568.12 gi|15921599|ref|NP_377268.1| - 0.082 13.0 1.5 0.43 10.7 0.1 3.0 3 1 0 3 3 3 0 Histidine kinase Glypican PF01153.19 gi|15921599|ref|NP_377268.1| - 0.096 11.5 2.9 0.15 10.9 2.3 1.5 1 1 1 2 2 2 0 Glypican CM_2 PF01817.21 gi|15921599|ref|NP_377268.1| - 1.9 8.9 9.4 0.36 11.2 2.7 3.1 3 0 0 3 3 3 0 Chorismate mutase type II WDCP PF15390.6 gi|15921599|ref|NP_377268.1| - 8.1 4.7 9.3 10 4.4 9.3 1.2 1 0 0 1 1 1 0 WD repeat and coiled-coil-containing protein family AAA_31 PF13614.6 gi|15921600|ref|NP_377269.1| - 6.1e-28 97.9 0.0 9.3e-28 97.3 0.0 1.3 1 0 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|15921600|ref|NP_377269.1| - 8.7e-17 61.4 0.0 1.4e-16 60.7 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ArsA_ATPase PF02374.15 gi|15921600|ref|NP_377269.1| - 9.9e-10 38.1 0.0 1.8e-09 37.2 0.0 1.4 1 0 0 1 1 1 1 Anion-transporting ATPase CBP_BcsQ PF06564.12 gi|15921600|ref|NP_377269.1| - 1.7e-08 34.2 0.0 4.4e-06 26.4 0.0 2.3 1 1 1 2 2 2 2 Cellulose biosynthesis protein BcsQ MipZ PF09140.11 gi|15921600|ref|NP_377269.1| - 8.3e-05 22.0 0.1 0.16 11.2 0.0 2.1 2 0 0 2 2 2 2 ATPase MipZ ParA PF10609.9 gi|15921600|ref|NP_377269.1| - 0.00013 21.5 0.1 0.00032 20.2 0.0 1.7 2 0 0 2 2 2 1 NUBPL iron-transfer P-loop NTPase Fer4_NifH PF00142.18 gi|15921600|ref|NP_377269.1| - 0.011 15.2 0.0 0.035 13.6 0.0 1.8 2 0 0 2 2 2 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family VirC1 PF07015.11 gi|15921600|ref|NP_377269.1| - 0.012 14.9 0.0 0.84 8.9 0.0 2.4 3 0 0 3 3 3 0 VirC1 protein Adeno_E3_15_3 PF03307.14 gi|15921601|ref|NP_377270.1| - 0.096 12.7 0.0 0.16 12.0 0.0 1.4 1 0 0 1 1 1 0 Adenovirus 15.3kD protein in E3 region HGD-D PF06050.13 gi|15921601|ref|NP_377270.1| - 0.1 12.3 0.0 0.11 12.3 0.0 1.1 1 0 0 1 1 1 0 2-hydroxyglutaryl-CoA dehydratase, D-component DUF4143 PF13635.6 gi|15921603|ref|NP_377272.1| - 1.3e-08 35.0 0.2 2.9e-08 33.9 0.2 1.7 1 1 0 1 1 1 1 Domain of unknown function (DUF4143) AAA_14 PF13173.6 gi|15921603|ref|NP_377272.1| - 0.00019 21.5 0.8 0.0005 20.1 0.0 2.2 3 0 0 3 3 3 1 AAA domain PDDEXK_9 PF08011.11 gi|15921603|ref|NP_377272.1| - 0.028 14.3 0.1 0.076 12.9 0.1 1.7 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily RHH_4 PF13467.6 gi|15921604|ref|NP_377273.1| - 2.6e-05 24.0 0.0 5e-05 23.1 0.0 1.5 1 0 0 1 1 1 1 Ribbon-helix-helix domain RepB-RCR_reg PF10723.9 gi|15921604|ref|NP_377273.1| - 0.0013 18.7 0.1 0.0027 17.6 0.1 1.5 1 0 0 1 1 1 1 Replication regulatory protein RepB RHH_1 PF01402.21 gi|15921604|ref|NP_377273.1| - 0.0021 17.9 0.6 0.004 17.0 0.0 1.8 2 0 0 2 2 2 1 Ribbon-helix-helix protein, copG family EcoR124_C PF12008.8 gi|15921604|ref|NP_377273.1| - 0.0033 17.1 1.0 0.0041 16.8 1.0 1.1 1 0 0 1 1 1 1 Type I restriction and modification enzyme - subunit R C terminal Lebercilin PF15619.6 gi|15921604|ref|NP_377273.1| - 0.004 16.8 0.7 0.0057 16.3 0.3 1.4 1 1 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease bZIP_1 PF00170.21 gi|15921604|ref|NP_377273.1| - 0.0079 16.3 0.4 0.0079 16.3 0.4 1.8 2 0 0 2 2 2 1 bZIP transcription factor Sld5 PF05916.11 gi|15921604|ref|NP_377273.1| - 0.027 14.9 0.3 0.03 14.8 0.3 1.1 1 0 0 1 1 1 0 GINS complex protein DUF1690 PF07956.11 gi|15921604|ref|NP_377273.1| - 0.03 14.7 0.9 0.034 14.6 0.9 1.1 1 0 0 1 1 1 0 Protein of Unknown function (DUF1690) COMMD1_N PF17221.3 gi|15921604|ref|NP_377273.1| - 0.031 14.6 0.1 0.036 14.4 0.1 1.3 1 1 0 1 1 1 0 COMMD1 N-terminal domain NAD_binding_11 PF14833.6 gi|15921604|ref|NP_377273.1| - 0.052 13.8 0.0 0.063 13.5 0.0 1.1 1 0 0 1 1 1 0 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase NBP1 PF08537.10 gi|15921604|ref|NP_377273.1| - 0.069 12.6 1.2 0.082 12.3 1.2 1.1 1 0 0 1 1 1 0 Fungal Nap binding protein NBP1 WD40_alt PF14077.6 gi|15921604|ref|NP_377273.1| - 0.44 10.5 2.5 2.5 8.0 0.5 2.5 2 1 1 3 3 3 0 Alternative WD40 repeat motif TrwB_AAD_bind PF10412.9 gi|15921608|ref|NP_377277.1| - 2e-10 40.2 0.4 3.8e-09 35.9 0.4 2.4 1 1 0 1 1 1 1 Type IV secretion-system coupling protein DNA-binding domain DUF87 PF01935.17 gi|15921608|ref|NP_377277.1| - 4.4e-09 36.8 9.2 9.2e-09 35.7 0.0 3.7 4 0 0 4 4 3 1 Helicase HerA, central domain T4SS-DNA_transf PF02534.14 gi|15921608|ref|NP_377277.1| - 2e-05 23.6 4.1 0.035 12.9 0.0 2.6 3 0 0 3 3 3 2 Type IV secretory system Conjugative DNA transfer FtsK_SpoIIIE PF01580.18 gi|15921608|ref|NP_377277.1| - 2.3e-05 23.9 0.0 8.9e-05 22.0 0.0 1.9 1 0 0 1 1 1 1 FtsK/SpoIIIE family Pox_A32 PF04665.12 gi|15921608|ref|NP_377277.1| - 6.8e-05 22.4 0.2 0.00034 20.2 0.0 2.2 2 0 0 2 2 2 1 Poxvirus A32 protein AAA_22 PF13401.6 gi|15921608|ref|NP_377277.1| - 0.00023 21.5 0.2 0.026 14.8 0.0 3.0 2 0 0 2 2 2 1 AAA domain TraG-D_C PF12696.7 gi|15921608|ref|NP_377277.1| - 0.0004 20.4 0.0 0.00096 19.1 0.0 1.6 1 0 0 1 1 1 1 TraM recognition site of TraD and TraG HTH_54 PF18607.1 gi|15921608|ref|NP_377277.1| - 0.00077 19.5 0.0 0.0074 16.3 0.0 2.6 2 0 0 2 2 2 1 ParA helix turn helix domain MarR_2 PF12802.7 gi|15921608|ref|NP_377277.1| - 0.0017 18.2 0.0 0.0044 16.9 0.0 1.7 1 0 0 1 1 1 1 MarR family AAA_10 PF12846.7 gi|15921608|ref|NP_377277.1| - 0.0052 15.8 2.2 0.0066 15.4 0.1 2.3 2 0 0 2 2 2 1 AAA-like domain PaaX PF07848.12 gi|15921608|ref|NP_377277.1| - 0.0074 16.5 0.0 0.022 14.9 0.0 1.8 1 0 0 1 1 1 1 PaaX-like protein HTH_24 PF13412.6 gi|15921608|ref|NP_377277.1| - 0.014 14.9 0.0 0.039 13.5 0.0 1.8 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding ResIII PF04851.15 gi|15921608|ref|NP_377277.1| - 0.018 15.0 2.7 0.04 13.9 0.0 2.8 2 1 0 2 2 2 0 Type III restriction enzyme, res subunit DUF853 PF05872.12 gi|15921608|ref|NP_377277.1| - 0.022 13.4 1.8 0.057 12.0 0.0 2.1 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF853) DEAD PF00270.29 gi|15921608|ref|NP_377277.1| - 0.023 14.4 0.6 0.13 12.0 0.0 2.4 2 0 0 2 2 2 0 DEAD/DEAH box helicase ATP_bind_1 PF03029.17 gi|15921608|ref|NP_377277.1| - 0.031 14.1 2.1 0.72 9.6 0.0 2.9 3 0 0 3 3 2 0 Conserved hypothetical ATP binding protein HTH_36 PF13730.6 gi|15921608|ref|NP_377277.1| - 0.036 14.0 0.9 0.14 12.1 0.0 2.5 3 0 0 3 3 1 0 Helix-turn-helix domain AAA_30 PF13604.6 gi|15921608|ref|NP_377277.1| - 0.04 13.6 0.0 0.51 10.0 0.0 2.3 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 gi|15921608|ref|NP_377277.1| - 0.04 14.4 3.4 0.074 13.6 0.0 2.7 2 1 0 2 2 2 0 ABC transporter TrmB PF01978.19 gi|15921608|ref|NP_377277.1| - 0.044 13.7 0.1 0.14 12.0 0.1 1.8 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB TsaE PF02367.17 gi|15921608|ref|NP_377277.1| - 0.049 13.6 0.1 0.24 11.4 0.1 2.2 2 0 0 2 2 2 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE MMR_HSR1 PF01926.23 gi|15921608|ref|NP_377277.1| - 0.058 13.5 0.0 0.44 10.6 0.0 2.5 2 0 0 2 2 2 0 50S ribosome-binding GTPase AAA_7 PF12775.7 gi|15921608|ref|NP_377277.1| - 0.067 12.7 0.0 0.24 10.9 0.0 1.9 2 0 0 2 2 2 0 P-loop containing dynein motor region DUF2249 PF10006.9 gi|15921608|ref|NP_377277.1| - 0.069 13.0 0.0 2.8 7.9 0.0 2.6 2 0 0 2 2 2 0 Uncharacterized conserved protein (DUF2249) DUF3895 PF13034.6 gi|15921609|ref|NP_377278.1| - 0.013 15.5 0.2 0.013 15.5 0.2 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3895) PaaX PF07848.12 gi|15921609|ref|NP_377278.1| - 0.14 12.4 0.1 0.25 11.6 0.1 1.4 1 0 0 1 1 1 0 PaaX-like protein PLDc_2 PF13091.6 gi|15921611|ref|NP_377280.1| - 1.2e-14 54.3 0.0 2e-14 53.6 0.0 1.4 1 0 0 1 1 1 1 PLD-like domain RE_NgoFVII PF09565.10 gi|15921611|ref|NP_377280.1| - 0.005 16.2 0.1 0.0073 15.7 0.1 1.4 1 0 0 1 1 1 1 NgoFVII restriction endonuclease 2H-phosphodiest PF08975.10 gi|15921611|ref|NP_377280.1| - 0.035 14.1 0.0 0.09 12.8 0.0 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF1868) pXO2-72 PF17443.2 gi|15921611|ref|NP_377280.1| - 3.3 8.0 5.3 6.1 7.2 1.0 3.0 2 1 1 3 3 3 0 Uncharacterized protein pXO2-72 PIN_12 PF16289.5 gi|15921612|ref|NP_377281.1| - 0.046 14.2 0.9 2 8.9 0.2 2.1 2 0 0 2 2 2 0 PIN domain Thioredoxin_6 PF13848.6 gi|15921612|ref|NP_377281.1| - 0.06 13.3 0.1 0.11 12.4 0.1 1.5 1 1 0 1 1 1 0 Thioredoxin-like domain Ribosomal_L26 PF16906.5 gi|15921613|ref|NP_377282.1| - 0.011 16.2 0.0 0.018 15.5 0.0 1.3 1 0 0 1 1 1 0 Ribosomal proteins L26 eukaryotic, L24P archaeal DUF3883 PF13020.6 gi|15921614|ref|NP_377283.1| - 0.058 13.4 0.0 0.075 13.1 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF3883) Pro_3_hydrox_C PF05373.11 gi|15921616|ref|NP_377285.1| - 0.015 15.4 0.6 0.059 13.5 0.0 2.4 2 0 0 2 2 2 0 L-proline 3-hydroxylase, C-terminal CRISPR_Cse2 PF09485.10 gi|15921616|ref|NP_377285.1| - 0.19 12.3 0.0 0.32 11.5 0.0 1.4 1 0 0 1 1 1 0 CRISPR-associated protein Cse2 (CRISPR_cse2) Radical_SAM PF04055.21 gi|15921617|ref|NP_377286.1| - 1.1e-15 58.4 0.1 2e-13 51.1 0.0 2.4 2 1 1 3 3 3 2 Radical SAM superfamily Ribosomal_L50 PF10501.9 gi|15921618|ref|NP_377287.1| - 0.046 13.9 0.5 6.8 6.9 0.5 2.7 1 1 2 3 3 3 0 Ribosomal subunit 39S RuvB_C PF05491.13 gi|15921620|ref|NP_377289.1| - 0.00014 21.6 0.0 0.00022 21.0 0.0 1.4 1 0 0 1 1 1 1 RuvB C-terminal winged helix domain HTH_27 PF13463.6 gi|15921620|ref|NP_377289.1| - 0.00019 21.9 0.0 0.00028 21.3 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_45 PF14947.6 gi|15921620|ref|NP_377289.1| - 0.001 19.0 0.8 0.0033 17.4 0.8 1.8 1 1 1 2 2 2 1 Winged helix-turn-helix DUF4423 PF14394.6 gi|15921620|ref|NP_377289.1| - 0.0016 18.2 0.0 0.0032 17.2 0.0 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4423) TrmB PF01978.19 gi|15921620|ref|NP_377289.1| - 0.048 13.6 0.0 0.085 12.8 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Mrr_N PF14338.6 gi|15921620|ref|NP_377289.1| - 0.15 12.2 0.2 0.6 10.3 0.1 2.1 1 1 2 3 3 3 0 Mrr N-terminal domain TrmB PF01978.19 gi|15921621|ref|NP_377290.1| - 1.4e-05 24.9 0.1 3.5e-05 23.6 0.0 1.6 1 1 1 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|15921621|ref|NP_377290.1| - 7.6e-05 22.2 0.8 0.00014 21.3 0.0 1.9 3 0 0 3 3 3 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|15921621|ref|NP_377290.1| - 0.0001 22.1 0.0 0.00015 21.6 0.0 1.3 1 0 0 1 1 1 1 MarR family RPA_C PF08784.11 gi|15921621|ref|NP_377290.1| - 0.0001 22.9 0.0 0.00017 22.2 0.0 1.3 1 0 0 1 1 1 1 Replication protein A C terminal HTH_34 PF13601.6 gi|15921621|ref|NP_377290.1| - 0.00048 20.3 0.0 0.001 19.2 0.0 1.5 1 1 1 2 2 2 1 Winged helix DNA-binding domain HTH_27 PF13463.6 gi|15921621|ref|NP_377290.1| - 0.00096 19.6 0.0 0.0024 18.3 0.0 1.7 1 1 1 2 2 2 1 Winged helix DNA-binding domain DUF1495 PF07381.11 gi|15921621|ref|NP_377290.1| - 0.011 15.5 0.0 0.32 10.9 0.0 2.2 1 1 0 1 1 1 0 Winged helix DNA-binding domain (DUF1495) TFIIE_alpha PF02002.17 gi|15921621|ref|NP_377290.1| - 0.013 15.3 0.5 0.019 14.8 0.5 1.3 1 0 0 1 1 1 0 TFIIE alpha subunit Tfb2 PF03849.14 gi|15921621|ref|NP_377290.1| - 0.015 14.3 0.1 0.018 14.0 0.1 1.1 1 0 0 1 1 1 0 Transcription factor Tfb2 STN1_2 PF09170.10 gi|15921621|ref|NP_377290.1| - 0.016 15.4 0.1 0.029 14.6 0.1 1.4 1 1 0 1 1 1 0 CST, Suppressor of cdc thirteen homolog, complex subunit STN1 Rrf2 PF02082.20 gi|15921621|ref|NP_377290.1| - 0.023 15.0 0.0 0.12 12.7 0.0 2.0 2 1 0 2 2 2 0 Transcriptional regulator DUF4393 PF14337.6 gi|15921621|ref|NP_377290.1| - 0.033 14.0 0.1 0.044 13.6 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4393) HTH_36 PF13730.6 gi|15921621|ref|NP_377290.1| - 0.043 13.8 0.0 0.15 12.1 0.0 1.9 1 1 0 1 1 1 0 Helix-turn-helix domain DUF2250 PF10007.9 gi|15921621|ref|NP_377290.1| - 0.058 13.5 0.1 0.38 10.9 0.0 2.0 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) HxlR PF01638.17 gi|15921621|ref|NP_377290.1| - 0.06 13.2 0.1 0.087 12.7 0.1 1.3 1 1 0 1 1 1 0 HxlR-like helix-turn-helix RTP PF02334.16 gi|15921621|ref|NP_377290.1| - 0.086 13.5 0.3 0.12 13.0 0.3 1.3 1 0 0 1 1 1 0 Replication terminator protein DUF2774 PF11242.8 gi|15921621|ref|NP_377290.1| - 0.088 13.0 0.0 0.17 12.1 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2774) FeoB_Cyto PF17910.1 gi|15921621|ref|NP_377290.1| - 0.088 13.4 0.8 13 6.4 0.1 2.2 2 0 0 2 2 2 0 FeoB cytosolic helical domain HisKA PF00512.25 gi|15921623|ref|NP_377292.1| - 0.098 12.7 0.6 0.28 11.2 0.6 1.8 1 1 0 1 1 1 0 His Kinase A (phospho-acceptor) domain Latarcin PF10279.9 gi|15921623|ref|NP_377292.1| - 0.63 10.5 4.2 2.3 8.7 4.2 1.9 1 1 0 1 1 1 0 Latarcin precursor YpjP PF14005.6 gi|15921625|ref|NP_377294.1| - 0.00082 19.4 0.5 0.00094 19.2 0.5 1.0 1 0 0 1 1 1 1 YpjP-like protein Cut8 PF08559.10 gi|15921625|ref|NP_377294.1| - 0.0075 15.9 0.1 0.0078 15.8 0.1 1.2 1 0 0 1 1 1 1 Cut8, nuclear proteasome tether protein RPT PF13446.6 gi|15921625|ref|NP_377294.1| - 0.011 15.7 1.8 0.066 13.1 0.2 2.2 2 0 0 2 2 2 0 A repeated domain in UCH-protein COG2 PF06148.11 gi|15921625|ref|NP_377294.1| - 0.027 14.6 0.2 0.033 14.3 0.2 1.3 1 0 0 1 1 1 0 COG (conserved oligomeric Golgi) complex component, COG2 DUF3797 PF12677.7 gi|15921626|ref|NP_377295.1| - 0.018 14.9 0.5 5.6 6.9 0.1 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF3797) SWIM PF04434.17 gi|15921626|ref|NP_377295.1| - 0.082 12.6 1.5 0.18 11.5 1.5 1.5 1 0 0 1 1 1 0 SWIM zinc finger RHH_1 PF01402.21 gi|15921628|ref|NP_377297.1| - 1.1e-08 34.7 0.9 1.6e-08 34.2 0.9 1.2 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family Lar_N PF09861.9 gi|15921628|ref|NP_377297.1| - 0.032 13.4 0.0 0.036 13.2 0.0 1.0 1 0 0 1 1 1 0 Lactate racemase N-terminal domain ZapB PF06005.12 gi|15921629|ref|NP_377298.1| - 7.4e-25 87.2 17.2 8.6e-25 87.0 17.2 1.1 1 0 0 1 1 1 1 Cell division protein ZapB SlyX PF04102.12 gi|15921629|ref|NP_377298.1| - 0.00049 20.7 13.7 0.00076 20.0 8.7 2.1 1 1 1 2 2 2 1 SlyX YabA PF06156.13 gi|15921629|ref|NP_377298.1| - 0.00073 20.1 13.3 0.0059 17.2 13.2 2.2 1 1 0 1 1 1 1 Initiation control protein YabA CENP-H PF05837.12 gi|15921629|ref|NP_377298.1| - 0.001 19.4 12.4 0.0049 17.3 12.4 1.8 1 1 0 1 1 1 1 Centromere protein H (CENP-H) HMMR_N PF15905.5 gi|15921629|ref|NP_377298.1| - 0.0013 18.2 14.1 0.0015 18.1 14.1 1.0 1 0 0 1 1 1 1 Hyaluronan mediated motility receptor N-terminal DUF4201 PF13870.6 gi|15921629|ref|NP_377298.1| - 0.0016 18.2 14.2 0.0021 17.8 14.2 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4201) Vinculin PF01044.19 gi|15921629|ref|NP_377298.1| - 0.0047 15.2 5.8 0.0049 15.2 5.8 1.0 1 0 0 1 1 1 1 Vinculin family DivIC PF04977.15 gi|15921629|ref|NP_377298.1| - 0.0052 16.5 9.0 0.0052 16.5 9.0 2.7 1 1 1 3 3 3 1 Septum formation initiator Sec34 PF04136.15 gi|15921629|ref|NP_377298.1| - 0.0083 16.0 9.8 0.0089 15.9 6.4 1.9 1 1 1 2 2 2 1 Sec34-like family RmuC PF02646.16 gi|15921629|ref|NP_377298.1| - 0.0095 15.1 8.2 0.012 14.8 3.6 2.0 1 1 1 2 2 2 1 RmuC family HAP1_N PF04849.13 gi|15921629|ref|NP_377298.1| - 0.012 14.8 11.2 0.014 14.6 11.2 1.1 1 0 0 1 1 1 0 HAP1 N-terminal conserved region GIT_CC PF16559.5 gi|15921629|ref|NP_377298.1| - 0.014 15.3 5.0 0.014 15.3 5.0 3.1 3 1 0 3 3 3 0 GIT coiled-coil Rho guanine nucleotide exchange factor bZIP_1 PF00170.21 gi|15921629|ref|NP_377298.1| - 0.015 15.4 14.3 0.015 15.4 9.5 2.3 2 1 0 2 2 2 0 bZIP transcription factor DUF812 PF05667.11 gi|15921629|ref|NP_377298.1| - 0.018 13.9 13.5 0.022 13.7 13.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF812) Fez1 PF06818.15 gi|15921629|ref|NP_377298.1| - 0.023 15.2 9.6 0.024 15.1 9.6 1.0 1 0 0 1 1 1 0 Fez1 Jnk-SapK_ap_N PF09744.9 gi|15921629|ref|NP_377298.1| - 0.028 14.7 6.9 0.028 14.7 6.9 2.0 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 DUF948 PF06103.11 gi|15921629|ref|NP_377298.1| - 0.031 14.5 3.2 0.044 14.0 1.9 1.9 1 1 1 2 2 2 0 Bacterial protein of unknown function (DUF948) TSC22 PF01166.18 gi|15921629|ref|NP_377298.1| - 0.035 14.4 2.0 0.035 14.4 2.0 3.2 2 1 1 3 3 2 0 TSC-22/dip/bun family DUF3450 PF11932.8 gi|15921629|ref|NP_377298.1| - 0.036 13.4 11.1 0.16 11.2 11.2 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF3450) GOLGA2L5 PF15070.6 gi|15921629|ref|NP_377298.1| - 0.037 12.7 11.4 0.042 12.5 11.4 1.1 1 0 0 1 1 1 0 Putative golgin subfamily A member 2-like protein 5 DUF5082 PF16888.5 gi|15921629|ref|NP_377298.1| - 0.037 14.3 7.7 0.037 14.3 7.7 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF5082) DUF3375 PF11855.8 gi|15921629|ref|NP_377298.1| - 0.045 12.7 7.0 0.051 12.5 7.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3375) DUF648 PF04890.13 gi|15921629|ref|NP_377298.1| - 0.049 13.4 6.0 0.06 13.1 6.0 1.0 1 0 0 1 1 1 0 Family of unknown function (DUF648) FlaC_arch PF05377.11 gi|15921629|ref|NP_377298.1| - 0.071 13.5 9.4 0.92 10.0 4.2 2.6 1 1 1 2 2 2 0 Flagella accessory protein C (FlaC) V_ATPase_I PF01496.19 gi|15921629|ref|NP_377298.1| - 0.077 10.9 7.8 0.085 10.8 7.8 1.0 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family FAM76 PF16046.5 gi|15921629|ref|NP_377298.1| - 0.1 11.9 9.1 0.13 11.6 9.1 1.1 1 0 0 1 1 1 0 FAM76 protein BRE1 PF08647.11 gi|15921629|ref|NP_377298.1| - 0.13 12.4 15.2 0.2 11.8 14.9 1.5 1 1 0 1 1 1 0 BRE1 E3 ubiquitin ligase NPV_P10 PF05531.12 gi|15921629|ref|NP_377298.1| - 0.13 12.7 5.9 0.51 10.8 5.2 2.2 1 1 1 2 2 1 0 Nucleopolyhedrovirus P10 protein CASP_C PF08172.12 gi|15921629|ref|NP_377298.1| - 0.14 11.5 9.0 0.19 11.1 9.0 1.3 1 0 0 1 1 1 0 CASP C terminal DUF4795 PF16043.5 gi|15921629|ref|NP_377298.1| - 0.16 11.5 10.7 0.12 12.0 7.0 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) Occludin_ELL PF07303.13 gi|15921629|ref|NP_377298.1| - 0.18 12.6 9.4 1.1 10.1 9.4 1.9 1 1 0 1 1 1 0 Occludin homology domain FapA PF03961.13 gi|15921629|ref|NP_377298.1| - 0.19 10.3 8.0 0.22 10.1 8.0 1.2 1 0 0 1 1 1 0 Flagellar Assembly Protein A Sec8_exocyst PF04048.14 gi|15921629|ref|NP_377298.1| - 0.2 11.5 7.1 0.46 10.4 7.1 1.7 1 1 0 1 1 1 0 Sec8 exocyst complex component specific domain Lebercilin PF15619.6 gi|15921629|ref|NP_377298.1| - 0.24 11.1 18.3 0.12 12.0 14.6 2.0 1 1 1 2 2 2 0 Ciliary protein causing Leber congenital amaurosis disease Sec20 PF03908.13 gi|15921629|ref|NP_377298.1| - 0.26 11.2 4.0 0.43 10.5 1.8 2.2 1 1 2 3 3 3 0 Sec20 Synaptobrevin PF00957.21 gi|15921629|ref|NP_377298.1| - 0.28 11.0 8.8 0.14 12.0 5.3 1.9 1 1 1 2 2 2 0 Synaptobrevin Atg14 PF10186.9 gi|15921629|ref|NP_377298.1| - 0.31 10.1 11.1 0.34 10.0 11.1 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 XRCC4 PF06632.12 gi|15921629|ref|NP_377298.1| - 0.33 9.7 12.7 0.38 9.6 12.7 1.1 1 0 0 1 1 1 0 DNA double-strand break repair and V(D)J recombination protein XRCC4 Spc24 PF08286.11 gi|15921629|ref|NP_377298.1| - 0.37 11.0 13.6 0.87 9.9 7.4 2.3 1 1 1 2 2 2 0 Spc24 subunit of Ndc80 Med9 PF07544.13 gi|15921629|ref|NP_377298.1| - 0.38 10.9 12.8 1.5 8.9 0.7 2.1 1 1 1 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 SecA_DEAD PF07517.14 gi|15921629|ref|NP_377298.1| - 0.42 9.8 4.3 0.47 9.7 4.3 1.2 1 0 0 1 1 1 0 SecA DEAD-like domain DUF3573 PF12097.8 gi|15921629|ref|NP_377298.1| - 0.43 9.4 2.1 0.45 9.3 2.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) ATG16 PF08614.11 gi|15921629|ref|NP_377298.1| - 0.44 10.8 16.2 2.1 8.5 16.1 1.8 1 1 0 1 1 1 0 Autophagy protein 16 (ATG16) TMF_TATA_bd PF12325.8 gi|15921629|ref|NP_377298.1| - 0.45 10.8 13.3 0.93 9.7 12.8 1.8 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding DUF2203 PF09969.9 gi|15921629|ref|NP_377298.1| - 0.47 11.2 5.7 0.62 10.8 5.7 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2203) PIN_12 PF16289.5 gi|15921629|ref|NP_377298.1| - 0.57 10.6 8.2 0.61 10.6 8.2 1.0 1 0 0 1 1 1 0 PIN domain DUF724 PF05266.14 gi|15921629|ref|NP_377298.1| - 0.62 9.9 9.3 1.7 8.4 9.3 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF724) Fib_alpha PF08702.10 gi|15921629|ref|NP_377298.1| - 0.62 10.2 12.5 2.3 8.4 12.5 1.7 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family SpoIIID PF12116.8 gi|15921629|ref|NP_377298.1| - 0.69 10.1 4.9 0.62 10.2 1.8 2.1 1 1 1 2 2 2 0 Stage III sporulation protein D DUF4407 PF14362.6 gi|15921629|ref|NP_377298.1| - 0.73 9.1 5.9 0.83 8.9 5.9 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) TolA_bind_tri PF16331.5 gi|15921629|ref|NP_377298.1| - 0.73 9.9 14.8 1.9 8.6 12.2 2.6 1 1 1 2 2 2 0 TolA binding protein trimerisation K-box PF01486.17 gi|15921629|ref|NP_377298.1| - 0.74 10.0 16.0 9.2 6.5 10.3 2.9 1 1 0 2 2 2 0 K-box region NRBF2 PF08961.10 gi|15921629|ref|NP_377298.1| - 0.76 9.4 11.5 0.24 11.0 8.4 1.7 1 1 1 2 2 2 0 Nuclear receptor-binding factor 2, autophagy regulator betaPIX_CC PF16523.5 gi|15921629|ref|NP_377298.1| - 0.78 9.6 11.6 0.13 12.1 6.9 1.9 1 1 1 2 2 2 0 betaPIX coiled coil Exonuc_VII_L PF02601.15 gi|15921629|ref|NP_377298.1| - 0.8 9.2 9.5 0.91 9.0 9.5 1.0 1 0 0 1 1 1 0 Exonuclease VII, large subunit DUF1664 PF07889.12 gi|15921629|ref|NP_377298.1| - 0.95 9.5 6.3 3.6 7.6 6.3 1.8 1 1 0 1 1 1 0 Protein of unknown function (DUF1664) ADIP PF11559.8 gi|15921629|ref|NP_377298.1| - 0.95 9.5 16.0 1.6 8.8 13.6 1.9 1 1 0 1 1 1 0 Afadin- and alpha -actinin-Binding TMPIT PF07851.13 gi|15921629|ref|NP_377298.1| - 1 8.5 8.2 1.4 8.1 8.2 1.2 1 0 0 1 1 1 0 TMPIT-like protein NYD-SP28_assoc PF14775.6 gi|15921629|ref|NP_377298.1| - 1 9.5 15.3 23 5.2 10.2 2.8 1 1 2 3 3 3 0 Sperm tail C-terminal domain DivIVA PF05103.13 gi|15921629|ref|NP_377298.1| - 1.6 8.8 13.7 45 4.1 13.7 2.4 1 1 0 1 1 1 0 DivIVA protein UPF0242 PF06785.11 gi|15921629|ref|NP_377298.1| - 1.9 8.5 17.4 13 5.9 17.7 1.8 1 1 0 1 1 1 0 Uncharacterised protein family (UPF0242) N-terminus TMF_DNA_bd PF12329.8 gi|15921629|ref|NP_377298.1| - 1.9 8.5 20.2 5.8 7.0 17.7 2.6 1 1 1 2 2 2 0 TATA element modulatory factor 1 DNA binding HAUS-augmin3 PF14932.6 gi|15921629|ref|NP_377298.1| - 2 7.9 13.3 5.8 6.4 13.3 1.6 1 1 0 1 1 1 0 HAUS augmin-like complex subunit 3 WD40_alt PF14077.6 gi|15921629|ref|NP_377298.1| - 2.4 8.1 6.7 0.41 10.5 2.3 2.0 2 0 0 2 2 2 0 Alternative WD40 repeat motif YlqD PF11068.8 gi|15921629|ref|NP_377298.1| - 2.4 8.5 12.8 1.1 9.6 9.5 1.7 1 1 1 2 2 2 0 YlqD protein APG6_N PF17675.1 gi|15921629|ref|NP_377298.1| - 2.8 8.5 17.9 0.78 10.3 13.3 1.9 1 1 1 2 2 2 0 Apg6 coiled-coil region DUF4298 PF14131.6 gi|15921629|ref|NP_377298.1| - 2.9 7.9 12.3 1.3 9.0 0.5 2.8 1 1 2 3 3 3 0 Domain of unknown function (DUF4298) AAA_lid_9 PF17871.1 gi|15921629|ref|NP_377298.1| - 3 7.8 9.2 0.98 9.4 4.2 2.0 1 1 0 2 2 2 0 AAA lid domain Noelin-1 PF12308.8 gi|15921629|ref|NP_377298.1| - 3.5 7.7 7.0 4 7.5 3.0 2.1 1 1 1 2 2 2 0 Neurogenesis glycoprotein Cauli_AT PF03233.13 gi|15921629|ref|NP_377298.1| - 3.9 7.4 10.0 2 8.3 5.4 1.9 1 1 1 2 2 2 0 Aphid transmission protein Speriolin_N PF15058.6 gi|15921629|ref|NP_377298.1| - 4.5 7.3 11.6 15 5.6 11.6 1.8 1 1 0 1 1 1 0 Speriolin N terminus LMBR1 PF04791.16 gi|15921629|ref|NP_377298.1| - 4.7 6.0 6.7 5.1 5.9 6.7 1.0 1 0 0 1 1 1 0 LMBR1-like membrane protein UPF0184 PF03670.13 gi|15921629|ref|NP_377298.1| - 6 7.3 7.7 3 8.3 4.6 2.0 1 1 1 2 2 2 0 Uncharacterised protein family (UPF0184) GrpE PF01025.19 gi|15921629|ref|NP_377298.1| - 6.8 6.3 13.7 72 3.0 13.7 2.1 1 1 0 1 1 1 0 GrpE DUF4337 PF14235.6 gi|15921629|ref|NP_377298.1| - 7.6 6.6 8.2 16 5.6 8.2 1.6 1 1 0 1 1 1 0 Domain of unknown function (DUF4337) FlxA PF14282.6 gi|15921629|ref|NP_377298.1| - 8.2 6.5 12.6 19 5.3 9.7 2.4 1 1 1 2 2 2 0 FlxA-like protein PikAIV_N PF18605.1 gi|15921629|ref|NP_377298.1| - 8.3 6.1 19.1 0.24 11.0 6.5 3.2 2 1 1 3 3 3 0 Narbonolide/10-deoxymethynolide synthase PikA4 N-terminal domain Phage_integrase PF00589.22 gi|15921631|ref|NP_377300.1| - 5.6e-11 42.5 0.1 3.6e-10 39.9 0.0 2.2 2 0 0 2 2 2 1 Phage integrase family Phage_integr_3 PF16795.5 gi|15921631|ref|NP_377300.1| - 1.3e-06 28.4 2.1 0.00039 20.4 2.1 2.9 1 1 0 1 1 1 1 Archaeal phage integrase Phage_int_SAM_4 PF13495.6 gi|15921631|ref|NP_377300.1| - 0.013 16.0 0.5 0.087 13.3 0.3 2.5 2 0 0 2 2 2 0 Phage integrase, N-terminal SAM-like domain Frankia_peptide PF14407.6 gi|15921631|ref|NP_377300.1| - 0.019 14.9 0.5 0.21 11.6 0.0 2.7 3 0 0 3 3 3 0 Ribosomally synthesized peptide prototyped by Frankia Franean1_4349. HTH_19 PF12844.7 gi|15921631|ref|NP_377300.1| - 0.042 13.9 0.3 2 8.5 0.0 2.7 2 0 0 2 2 2 0 Helix-turn-helix domain AdoMet_dc PF02675.15 gi|15921633|ref|NP_377302.1| - 3.1e-34 117.4 0.0 3.5e-34 117.2 0.0 1.0 1 0 0 1 1 1 1 S-adenosylmethionine decarboxylase DUF4116 PF13475.6 gi|15921633|ref|NP_377302.1| - 0.081 12.7 0.1 0.18 11.6 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4116) ACP_syn_III_C PF08541.10 gi|15921634|ref|NP_377303.1| - 8.5e-11 41.9 0.0 3.2e-10 40.1 0.0 2.0 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal HMG_CoA_synt_C PF08540.10 gi|15921634|ref|NP_377303.1| - 4.7e-05 23.2 0.0 0.013 15.2 0.0 2.1 1 1 1 2 2 2 2 Hydroxymethylglutaryl-coenzyme A synthase C terminal ACP_syn_III PF08545.10 gi|15921634|ref|NP_377303.1| - 0.00061 19.6 0.5 0.0014 18.4 0.1 1.9 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Thiolase_N PF00108.23 gi|15921634|ref|NP_377303.1| - 0.0088 15.4 0.1 0.012 14.9 0.1 1.1 1 0 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|15921634|ref|NP_377303.1| - 0.09 12.4 0.0 0.17 11.5 0.0 1.5 1 0 0 1 1 1 0 Thiolase, C-terminal domain Thiolase_N PF00108.23 gi|15921635|ref|NP_377304.1| - 3e-05 23.5 0.0 4.3e-05 23.0 0.0 1.2 1 0 0 1 1 1 1 Thiolase, N-terminal domain ACP_syn_III PF08545.10 gi|15921635|ref|NP_377304.1| - 0.00069 19.4 0.3 0.004 17.0 0.0 2.1 2 0 0 2 2 2 1 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III Thiolase_C PF02803.18 gi|15921635|ref|NP_377304.1| - 0.0069 16.0 0.0 0.014 15.1 0.0 1.4 1 0 0 1 1 1 1 Thiolase, C-terminal domain HTH_6 PF01418.17 gi|15921635|ref|NP_377304.1| - 0.12 12.4 0.1 0.32 11.0 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family OB_aCoA_assoc PF01796.17 gi|15921636|ref|NP_377305.1| - 3.6e-13 49.3 0.0 5.1e-13 48.8 0.0 1.2 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated DUF35_N PF12172.8 gi|15921636|ref|NP_377305.1| - 0.00012 21.9 0.1 0.00022 21.1 0.1 1.3 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) zinc_ribbon_2 PF13240.6 gi|15921636|ref|NP_377305.1| - 0.0083 15.8 3.3 0.016 14.9 3.3 1.5 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|15921636|ref|NP_377305.1| - 0.013 15.5 0.3 0.019 15.0 0.3 1.2 1 0 0 1 1 1 0 Double zinc ribbon TackOD1 PF18551.1 gi|15921636|ref|NP_377305.1| - 0.022 14.4 1.3 0.036 13.7 1.3 1.4 1 1 0 1 1 1 0 Thaumarchaeal output domain 1 zf-ACC PF17848.1 gi|15921636|ref|NP_377305.1| - 0.041 14.0 4.4 0.55 10.3 1.0 2.4 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain HypA PF01155.19 gi|15921636|ref|NP_377305.1| - 0.065 13.3 0.2 0.11 12.6 0.2 1.3 1 0 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA Zn-ribbon_8 PF09723.10 gi|15921636|ref|NP_377305.1| - 0.067 13.3 1.8 0.19 11.9 1.8 1.8 1 1 0 1 1 1 0 Zinc ribbon domain Desulfoferrod_N PF06397.12 gi|15921636|ref|NP_377305.1| - 0.068 12.8 3.7 2.4 7.9 0.6 2.3 2 0 0 2 2 2 0 Desulfoferrodoxin, N-terminal domain zf-C2HC5 PF06221.13 gi|15921636|ref|NP_377305.1| - 0.072 13.1 0.9 0.11 12.5 0.9 1.2 1 0 0 1 1 1 0 Putative zinc finger motif, C2HC5-type Methyltransf_13 PF08421.11 gi|15921636|ref|NP_377305.1| - 0.1 12.9 0.0 20 5.5 0.0 2.2 2 0 0 2 2 2 0 Putative zinc binding domain RNA_POL_M_15KD PF02150.16 gi|15921636|ref|NP_377305.1| - 0.12 12.3 1.6 0.47 10.4 1.6 1.9 1 1 0 1 1 1 0 RNA polymerases M/15 Kd subunit zf-ribbon_3 PF13248.6 gi|15921636|ref|NP_377305.1| - 0.16 11.4 2.4 0.41 10.1 2.4 1.6 1 0 0 1 1 1 0 zinc-ribbon domain Nudix_N_2 PF14803.6 gi|15921636|ref|NP_377305.1| - 0.26 11.2 1.6 22 5.1 0.1 2.6 2 0 0 2 2 2 0 Nudix N-terminal HMG-CoA_red PF00368.18 gi|15921637|ref|NP_377306.1| - 3.3e-131 437.7 0.5 3.8e-131 437.5 0.5 1.0 1 0 0 1 1 1 1 Hydroxymethylglutaryl-coenzyme A reductase SHMT PF00464.19 gi|15921638|ref|NP_377307.1| - 1.2e-67 228.3 0.2 1.5e-67 227.9 0.2 1.0 1 0 0 1 1 1 1 Serine hydroxymethyltransferase Aminotran_1_2 PF00155.21 gi|15921638|ref|NP_377307.1| - 3.3e-09 36.4 0.1 7.8e-09 35.2 0.1 1.5 1 1 0 1 1 1 1 Aminotransferase class I and II Beta_elim_lyase PF01212.21 gi|15921638|ref|NP_377307.1| - 1.9e-08 33.9 0.1 2.7e-08 33.4 0.1 1.2 1 0 0 1 1 1 1 Beta-eliminating lyase Aminotran_5 PF00266.19 gi|15921638|ref|NP_377307.1| - 7.5e-05 21.8 0.0 0.00012 21.2 0.0 1.3 1 0 0 1 1 1 1 Aminotransferase class-V CheD PF03975.13 gi|15921638|ref|NP_377307.1| - 0.047 13.8 0.1 0.16 12.0 0.0 2.0 2 0 0 2 2 2 0 CheD chemotactic sensory transduction Cys_Met_Meta_PP PF01053.20 gi|15921638|ref|NP_377307.1| - 0.095 11.2 0.1 0.15 10.5 0.1 1.4 1 1 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme SelA PF03841.13 gi|15921638|ref|NP_377307.1| - 0.11 11.5 0.0 0.22 10.4 0.0 1.4 1 0 0 1 1 1 0 L-seryl-tRNA selenium transferase Usp PF00582.26 gi|15921639|ref|NP_377308.1| - 1.8e-17 64.2 0.0 3.2e-15 56.9 0.0 2.0 1 1 0 1 1 1 1 Universal stress protein family Gp_dh_C PF02800.20 gi|15921640|ref|NP_377309.1| - 3.6e-21 75.4 4.0 3.6e-21 75.4 4.0 1.5 2 0 0 2 2 2 1 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DapB_N PF01113.20 gi|15921640|ref|NP_377309.1| - 5.3e-11 42.7 0.3 1.3e-10 41.5 0.3 1.7 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Gp_dh_N PF00044.24 gi|15921640|ref|NP_377309.1| - 1.4e-05 25.4 1.0 0.00029 21.1 0.1 3.0 2 1 1 3 3 3 1 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|15921640|ref|NP_377309.1| - 0.00082 18.8 0.6 0.1 11.9 0.2 3.1 2 1 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain IlvN PF07991.12 gi|15921640|ref|NP_377309.1| - 0.0084 15.7 0.9 0.36 10.4 0.4 3.0 2 1 0 2 2 2 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain Sacchrp_dh_NADP PF03435.18 gi|15921640|ref|NP_377309.1| - 0.014 15.6 0.1 0.049 13.9 0.1 1.9 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain GFO_IDH_MocA PF01408.22 gi|15921640|ref|NP_377309.1| - 0.019 15.8 0.0 0.044 14.6 0.0 1.7 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold NAD_binding_3 PF03447.16 gi|15921640|ref|NP_377309.1| - 0.055 14.1 1.0 0.68 10.6 0.1 2.5 2 1 0 2 2 2 0 Homoserine dehydrogenase, NAD binding domain Semialdhyde_dh PF01118.24 gi|15921640|ref|NP_377309.1| - 0.12 12.8 0.0 0.48 10.9 0.0 2.1 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 gi|15921640|ref|NP_377309.1| - 0.28 11.3 2.5 0.58 10.3 0.1 2.5 2 2 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase PGK PF00162.19 gi|15921641|ref|NP_377310.1| - 3.1e-102 342.4 0.0 3.5e-102 342.2 0.0 1.0 1 0 0 1 1 1 1 Phosphoglycerate kinase SesA PF17107.5 gi|15921643|ref|NP_377312.1| - 0.076 13.2 0.1 0.28 11.4 0.1 1.9 1 1 0 1 1 1 0 N-terminal domain on NACHT_NTPase and P-loop NTPases TTD PF12148.8 gi|15921646|ref|NP_377315.1| - 0.0067 16.3 1.1 0.0081 16.0 1.1 1.2 1 0 0 1 1 1 1 Tandem tudor domain within UHRF1 AcylCoA_DH_N PF12418.8 gi|15921646|ref|NP_377315.1| - 0.042 13.9 0.0 0.068 13.2 0.0 1.3 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase N terminal DNA_pol3_gamma3 PF12169.8 gi|15921646|ref|NP_377315.1| - 0.078 12.9 0.1 0.13 12.2 0.1 1.3 1 0 0 1 1 1 0 DNA polymerase III subunits gamma and tau domain III MAT1 PF06391.13 gi|15921646|ref|NP_377315.1| - 0.2 11.4 9.6 0.25 11.1 9.6 1.0 1 0 0 1 1 1 0 CDK-activating kinase assembly factor MAT1 SBDS_C PF09377.10 gi|15921646|ref|NP_377315.1| - 0.36 10.9 2.4 0.36 10.9 1.5 1.4 1 1 0 1 1 1 0 SBDS protein C-terminal domain DUF5616 PF18481.1 gi|15921647|ref|NP_377316.1| - 5.4e-27 94.8 0.8 8.3e-27 94.2 0.8 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF5616) DUF434 PF04256.12 gi|15921647|ref|NP_377316.1| - 1.1e-24 85.9 2.7 2.1e-24 85.0 2.7 1.5 1 0 0 1 1 1 1 Protein of unknown function (DUF434) Mut7-C PF01927.16 gi|15921647|ref|NP_377316.1| - 0.0015 18.7 0.1 0.35 11.0 0.0 2.2 2 0 0 2 2 2 2 Mut7-C RNAse domain SpoU_sub_bind PF08032.12 gi|15921647|ref|NP_377316.1| - 0.19 12.0 0.8 0.53 10.6 0.1 2.1 2 0 0 2 2 2 0 RNA 2'-O ribose methyltransferase substrate binding tRNA-synt_2c PF01411.19 gi|15921648|ref|NP_377317.1| - 5.9e-118 394.8 0.2 9.6e-118 394.1 0.0 1.4 2 0 0 2 2 2 1 tRNA synthetases class II (A) tRNA_SAD PF07973.14 gi|15921648|ref|NP_377317.1| - 3.8e-14 52.5 0.3 8.8e-14 51.3 0.3 1.7 1 0 0 1 1 1 1 Threonyl and Alanyl tRNA synthetase second additional domain tRNA-synt_2e PF02091.15 gi|15921648|ref|NP_377317.1| - 0.0042 16.4 0.0 0.012 14.9 0.0 1.8 1 0 0 1 1 1 1 Glycyl-tRNA synthetase alpha subunit HTH_28 PF13518.6 gi|15921648|ref|NP_377317.1| - 0.016 15.3 0.0 0.11 12.7 0.0 2.5 2 0 0 2 2 2 0 Helix-turn-helix domain ATG19_autophagy PF12744.7 gi|15921648|ref|NP_377317.1| - 0.12 11.6 8.2 3.3 6.9 0.1 2.3 2 0 0 2 2 2 0 Autophagy protein Atg19, Atg8-binding Ribosomal_60s PF00428.19 gi|15921649|ref|NP_377318.1| - 8.2e-21 74.4 13.3 9.4e-21 74.2 13.3 1.1 1 0 0 1 1 1 1 60s Acidic ribosomal protein EF-hand_14 PF17959.1 gi|15921649|ref|NP_377318.1| - 0.0029 17.9 0.3 0.0043 17.4 0.0 1.4 2 0 0 2 2 2 1 EF-hand domain PepSY_2 PF13670.6 gi|15921649|ref|NP_377318.1| - 0.0038 17.2 3.0 1 9.4 1.1 2.2 2 0 0 2 2 2 2 Peptidase propeptide and YPEB domain DUF2007 PF09413.10 gi|15921649|ref|NP_377318.1| - 0.056 13.6 0.3 0.59 10.3 0.1 2.1 1 1 1 2 2 2 0 Putative prokaryotic signal transducing protein DUF3391 PF11871.8 gi|15921649|ref|NP_377318.1| - 0.085 13.4 2.3 0.1 13.2 2.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF3391) Ribosomal_L10 PF00466.20 gi|15921650|ref|NP_377319.1| - 1.1e-27 96.0 0.3 2.4e-27 95.0 0.3 1.5 1 0 0 1 1 1 1 Ribosomal protein L10 RL10P_insert PF17777.1 gi|15921650|ref|NP_377319.1| - 1.2e-16 60.5 0.1 2.5e-16 59.4 0.1 1.6 1 0 0 1 1 1 1 Insertion domain in 60S ribosomal protein L10P Ribosomal_60s PF00428.19 gi|15921650|ref|NP_377319.1| - 7.7e-05 23.2 3.7 0.00017 22.1 3.7 1.7 1 0 0 1 1 1 1 60s Acidic ribosomal protein Ribosomal_L1 PF00687.21 gi|15921651|ref|NP_377320.1| - 1e-36 126.6 1.2 1.2e-36 126.4 1.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L1p/L10e family Ribosomal_L11_N PF03946.14 gi|15921652|ref|NP_377321.1| - 8.7e-21 73.5 0.6 1.7e-20 72.6 0.6 1.5 1 0 0 1 1 1 1 Ribosomal protein L11, N-terminal domain Ribosomal_L11 PF00298.19 gi|15921652|ref|NP_377321.1| - 2.6e-17 63.1 0.5 4.2e-17 62.4 0.5 1.4 1 0 0 1 1 1 1 Ribosomal protein L11, RNA binding domain Spt5-NGN PF03439.13 gi|15921653|ref|NP_377322.1| - 1e-23 83.0 0.2 2e-23 82.1 0.2 1.5 1 0 0 1 1 1 1 Early transcription elongation factor of RNA pol II, NGN section KOW PF00467.29 gi|15921653|ref|NP_377322.1| - 3.5e-08 33.1 1.5 8.2e-08 31.9 0.1 2.2 2 0 0 2 2 2 1 KOW motif SecE PF00584.20 gi|15921654|ref|NP_377323.1| - 0.003 17.4 0.1 0.0033 17.3 0.1 1.1 1 0 0 1 1 1 1 SecE/Sec61-gamma subunits of protein translocation complex Synaptobrevin PF00957.21 gi|15921654|ref|NP_377323.1| - 0.031 14.0 0.4 0.035 13.9 0.4 1.2 1 0 0 1 1 1 0 Synaptobrevin SRP54 PF00448.22 gi|60623873|ref|NP_377324.2| - 5e-73 244.9 0.0 8.1e-73 244.2 0.0 1.3 1 0 0 1 1 1 1 SRP54-type protein, GTPase domain SRP54_N PF02881.19 gi|60623873|ref|NP_377324.2| - 5.1e-13 49.0 2.0 5.1e-13 49.0 2.0 3.7 4 0 0 4 4 4 1 SRP54-type protein, helical bundle domain AAA_17 PF13207.6 gi|60623873|ref|NP_377324.2| - 3.5e-05 24.2 0.0 3.5e-05 24.2 0.0 2.8 2 1 1 3 3 3 1 AAA domain cobW PF02492.19 gi|60623873|ref|NP_377324.2| - 8.8e-05 22.2 0.2 0.0002 21.0 0.2 1.5 1 0 0 1 1 1 1 CobW/HypB/UreG, nucleotide-binding domain AAA_33 PF13671.6 gi|60623873|ref|NP_377324.2| - 0.0002 21.5 0.1 0.013 15.7 0.0 2.4 2 0 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|60623873|ref|NP_377324.2| - 0.0003 21.1 1.4 0.001 19.4 0.1 2.4 2 2 0 2 2 2 1 AAA domain AAA_30 PF13604.6 gi|60623873|ref|NP_377324.2| - 0.00084 19.1 0.0 0.0014 18.4 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|60623873|ref|NP_377324.2| - 0.0018 18.7 0.4 0.0093 16.4 0.0 2.2 1 1 1 2 2 2 1 AAA ATPase domain NTPase_1 PF03266.15 gi|60623873|ref|NP_377324.2| - 0.0021 18.0 7.5 0.25 11.2 0.5 3.5 2 1 1 3 3 3 2 NTPase AAA_24 PF13479.6 gi|60623873|ref|NP_377324.2| - 0.004 16.9 0.4 0.018 14.7 0.3 2.3 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|60623873|ref|NP_377324.2| - 0.0068 16.8 0.2 0.0068 16.8 0.2 2.7 3 1 0 3 3 2 1 ATPase family associated with various cellular activities (AAA) RsgA_GTPase PF03193.16 gi|60623873|ref|NP_377324.2| - 0.017 15.1 1.9 0.038 13.9 0.1 2.5 2 1 1 3 3 3 0 RsgA GTPase Peripla_BP_4 PF13407.6 gi|60623873|ref|NP_377324.2| - 0.031 13.8 1.1 3.6 7.1 0.1 3.1 3 0 0 3 3 3 0 Periplasmic binding protein domain Zeta_toxin PF06414.12 gi|60623873|ref|NP_377324.2| - 0.048 12.9 0.3 0.12 11.6 0.0 1.8 2 0 0 2 2 2 0 Zeta toxin MMR_HSR1 PF01926.23 gi|60623873|ref|NP_377324.2| - 0.056 13.5 4.6 0.046 13.8 0.7 2.6 1 1 1 2 2 2 0 50S ribosome-binding GTPase NACHT PF05729.12 gi|60623873|ref|NP_377324.2| - 0.057 13.3 0.0 0.15 12.0 0.0 1.7 1 0 0 1 1 1 0 NACHT domain AAA_7 PF12775.7 gi|60623873|ref|NP_377324.2| - 0.068 12.7 0.7 0.22 11.0 0.1 2.0 1 1 0 2 2 2 0 P-loop containing dynein motor region AAA_28 PF13521.6 gi|60623873|ref|NP_377324.2| - 0.074 13.3 0.0 0.24 11.6 0.0 2.0 1 0 0 1 1 1 0 AAA domain MeaB PF03308.16 gi|60623873|ref|NP_377324.2| - 0.076 12.0 0.2 0.22 10.5 0.0 1.8 3 0 0 3 3 3 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_19 PF13245.6 gi|60623873|ref|NP_377324.2| - 0.078 13.3 0.0 0.17 12.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain APS_kinase PF01583.20 gi|60623873|ref|NP_377324.2| - 0.085 12.7 0.0 0.16 11.8 0.0 1.4 1 0 0 1 1 1 0 Adenylylsulphate kinase CbiA PF01656.23 gi|60623873|ref|NP_377324.2| - 0.11 12.5 3.7 0.19 11.8 0.6 2.9 2 2 0 2 2 2 0 CobQ/CobB/MinD/ParA nucleotide binding domain ABC_tran PF00005.27 gi|60623873|ref|NP_377324.2| - 0.96 10.0 5.7 1.6 9.3 0.1 2.5 1 1 0 2 2 2 0 ABC transporter PTPlike_phytase PF14566.6 gi|60623873|ref|NP_377324.2| - 1.3 9.2 8.6 2.4e+02 1.8 8.6 3.0 1 1 0 1 1 1 0 Inositol hexakisphosphate DHHA1 PF02272.19 gi|60623873|ref|NP_377324.2| - 5.1 7.5 9.7 6.4 7.2 0.0 3.1 3 1 1 4 4 3 0 DHHA1 domain Prefoldin PF02996.17 gi|15921656|ref|NP_377325.1| - 7.7e-27 93.6 6.7 7.7e-27 93.6 6.7 1.4 2 0 0 2 2 1 1 Prefoldin subunit DUF1664 PF07889.12 gi|15921656|ref|NP_377325.1| - 0.0024 17.9 6.6 0.4 10.7 0.9 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF1664) MukF_M PF17192.4 gi|15921656|ref|NP_377325.1| - 0.0033 17.2 4.4 0.21 11.3 0.6 2.1 2 0 0 2 2 2 2 MukF middle domain Tektin PF03148.14 gi|15921656|ref|NP_377325.1| - 0.0053 15.6 7.3 0.016 13.9 0.2 2.1 2 0 0 2 2 2 1 Tektin family DUF3450 PF11932.8 gi|15921656|ref|NP_377325.1| - 0.0056 16.0 4.1 0.0056 16.0 4.1 2.1 2 0 0 2 2 2 1 Protein of unknown function (DUF3450) CENP-F_leu_zip PF10473.9 gi|15921656|ref|NP_377325.1| - 0.0059 16.6 3.1 0.0059 16.6 3.1 2.1 2 0 0 2 2 2 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 Helo_like_N PF17111.5 gi|15921656|ref|NP_377325.1| - 0.026 13.9 5.4 0.047 13.0 0.4 2.1 2 0 0 2 2 2 0 Fungal N-terminal domain of STAND proteins Herpes_UL36 PF03586.13 gi|15921656|ref|NP_377325.1| - 0.028 13.7 0.6 0.065 12.5 0.2 1.7 1 1 1 2 2 2 0 Herpesvirus UL36 tegument protein OmpH PF03938.14 gi|15921656|ref|NP_377325.1| - 0.053 13.9 12.0 0.29 11.5 1.3 2.2 2 0 0 2 2 2 0 Outer membrane protein (OmpH-like) T3SS_needle_E PF08988.10 gi|15921656|ref|NP_377325.1| - 0.067 13.4 7.1 1.2 9.4 0.6 2.3 2 0 0 2 2 2 0 Type III secretion system, cytoplasmic E component of needle EMP24_GP25L PF01105.24 gi|15921656|ref|NP_377325.1| - 0.13 12.2 3.6 4.3 7.2 0.3 2.1 1 1 1 2 2 2 0 emp24/gp25L/p24 family/GOLD MHB PF16525.5 gi|15921656|ref|NP_377325.1| - 0.17 12.2 1.7 1.1 9.5 0.2 2.2 2 0 0 2 2 2 0 Haemophore, haem-binding CENP-R PF06729.12 gi|15921656|ref|NP_377325.1| - 0.18 11.8 5.9 0.37 10.7 0.8 2.1 2 0 0 2 2 2 0 Kinetochore component, CENP-R Syntaxin-6_N PF09177.11 gi|15921656|ref|NP_377325.1| - 0.18 12.3 2.9 9.5 6.9 0.4 2.3 2 0 0 2 2 2 0 Syntaxin 6, N-terminal Cep57_MT_bd PF06657.13 gi|15921656|ref|NP_377325.1| - 0.19 12.2 9.8 2.1 8.8 1.4 2.4 2 1 0 2 2 2 0 Centrosome microtubule-binding domain of Cep57 Prefoldin_2 PF01920.20 gi|15921656|ref|NP_377325.1| - 0.21 11.5 14.1 0.75 9.8 1.3 2.8 1 1 2 3 3 3 0 Prefoldin subunit MetOD2 PF18548.1 gi|15921656|ref|NP_377325.1| - 0.24 11.6 7.4 1.1 9.4 0.9 2.3 2 0 0 2 2 2 0 Metanogen output domain 2 NPV_P10 PF05531.12 gi|15921656|ref|NP_377325.1| - 0.43 11.1 8.4 3.4 8.2 1.3 2.4 2 0 0 2 2 2 0 Nucleopolyhedrovirus P10 protein ATG16 PF08614.11 gi|15921656|ref|NP_377325.1| - 0.45 10.7 10.0 1.8 8.7 1.1 2.1 2 0 0 2 2 2 0 Autophagy protein 16 (ATG16) APG6_N PF17675.1 gi|15921656|ref|NP_377325.1| - 0.54 10.8 12.3 3.6 8.1 4.3 2.1 2 0 0 2 2 2 0 Apg6 coiled-coil region DUF745 PF05335.13 gi|15921656|ref|NP_377325.1| - 0.55 9.9 11.4 3.7 7.2 0.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF745) Fib_alpha PF08702.10 gi|15921656|ref|NP_377325.1| - 0.57 10.4 12.6 1.5 9.0 2.7 2.1 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family KxDL PF10241.9 gi|15921656|ref|NP_377325.1| - 0.9 9.9 11.3 0.6 10.4 3.9 2.3 2 0 0 2 2 2 0 Uncharacterized conserved protein Fzo_mitofusin PF04799.13 gi|15921656|ref|NP_377325.1| - 1.1 8.8 6.3 6 6.4 0.8 2.3 2 1 0 2 2 2 0 fzo-like conserved region P4Ha_N PF08336.11 gi|15921656|ref|NP_377325.1| - 2.8 8.0 9.0 7.6 6.5 2.0 2.2 2 0 0 2 2 2 0 Prolyl 4-Hydroxylase alpha-subunit, N-terminal region ZapB PF06005.12 gi|15921656|ref|NP_377325.1| - 3 8.4 13.6 0.34 11.4 1.4 2.5 2 1 0 2 2 2 0 Cell division protein ZapB HAUS-augmin3 PF14932.6 gi|15921656|ref|NP_377325.1| - 3 7.3 14.9 0.25 10.9 3.4 2.1 1 1 1 2 2 2 0 HAUS augmin-like complex subunit 3 Nsp1_C PF05064.13 gi|15921656|ref|NP_377325.1| - 3.3 7.5 12.0 12 5.7 3.2 2.9 2 1 0 2 2 2 0 Nsp1-like C-terminal region Docking PF08990.11 gi|15921656|ref|NP_377325.1| - 3.6 7.3 5.3 2.1 8.0 0.6 2.4 2 0 0 2 2 2 0 Erythronolide synthase docking RecG_N PF17190.4 gi|15921656|ref|NP_377325.1| - 4.3 8.1 7.2 5.5 7.8 1.2 2.3 2 0 0 2 2 2 0 RecG N-terminal helical domain DUF5320 PF17253.2 gi|15921656|ref|NP_377325.1| - 5.7 8.1 5.6 31 5.7 0.0 2.8 1 1 1 3 3 3 0 Family of unknown function (DUF5320) CorA PF01544.18 gi|15921656|ref|NP_377325.1| - 6.5 6.0 8.9 14 4.9 6.8 1.8 1 1 1 2 2 2 0 CorA-like Mg2+ transporter protein Ribosomal_L18A PF01775.17 gi|15921657|ref|NP_377326.1| - 6e-11 42.5 2.7 9.5e-11 41.9 2.7 1.3 1 0 0 1 1 1 1 Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A Ribosomal_L36e PF01158.18 gi|15921657|ref|NP_377326.1| - 0.0073 16.5 0.5 0.01 16.1 0.4 1.3 1 1 0 1 1 1 1 Ribosomal protein L36e Hepar_II_III_N PF16889.5 gi|15921657|ref|NP_377326.1| - 0.062 12.6 0.9 0.072 12.4 0.9 1.0 1 0 0 1 1 1 0 Heparinase II/III N-terminus Ribosomal_S4 PF00163.19 gi|15921657|ref|NP_377326.1| - 0.1 13.5 1.0 0.13 13.2 1.0 1.3 1 0 0 1 1 1 0 Ribosomal protein S4/S9 N-terminal domain eIF-6 PF01912.18 gi|15921658|ref|NP_377327.1| - 2e-65 219.9 5.3 2.4e-65 219.6 5.3 1.1 1 0 0 1 1 1 1 eIF-6 family LRIF1 PF15741.5 gi|15921658|ref|NP_377327.1| - 0.042 12.4 0.0 0.053 12.1 0.0 1.1 1 0 0 1 1 1 0 Ligand-dependent nuclear receptor-interacting factor 1 Nicastrin PF05450.15 gi|15921658|ref|NP_377327.1| - 0.12 11.9 0.0 0.19 11.1 0.0 1.4 1 0 0 1 1 1 0 Nicastrin Ribosomal_L31e PF01198.19 gi|15921660|ref|NP_377329.1| - 1.5e-08 34.8 2.4 1.8e-08 34.5 2.4 1.1 1 0 0 1 1 1 1 Ribosomal protein L31e V_cholerae_RfbT PF05575.11 gi|15921660|ref|NP_377329.1| - 0.041 13.1 0.0 0.041 13.1 0.0 1.2 1 0 0 1 1 1 0 Vibrio cholerae RfbT protein Ribosomal_L39 PF00832.20 gi|15921661|ref|NP_377330.1| - 6e-22 77.0 4.8 7.5e-22 76.7 4.8 1.1 1 0 0 1 1 1 1 Ribosomal L39 protein dsDNA_bind PF01984.20 gi|15921662|ref|NP_377331.1| - 3.3e-27 95.0 12.5 4e-27 94.7 12.5 1.1 1 0 0 1 1 1 1 Double-stranded DNA-binding domain Radial_spoke_3 PF06098.11 gi|15921662|ref|NP_377331.1| - 0.055 12.7 8.7 0.067 12.5 8.7 1.1 1 0 0 1 1 1 0 Radial spoke protein 3 DUF3090 PF11290.8 gi|15921662|ref|NP_377331.1| - 0.16 11.7 3.5 2.9 7.7 0.1 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3090) DUF4192 PF13830.6 gi|15921662|ref|NP_377331.1| - 0.85 9.6 4.8 1 9.3 4.8 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4192) DUF4355 PF14265.6 gi|15921662|ref|NP_377331.1| - 4.7 7.5 15.2 1.6 9.0 9.9 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4355) Ribosomal_S19e PF01090.19 gi|15921663|ref|NP_377332.1| - 1.6e-43 147.7 0.0 1.9e-43 147.5 0.0 1.0 1 0 0 1 1 1 1 Ribosomal protein S19e RuvB_C PF05491.13 gi|15921663|ref|NP_377332.1| - 0.022 14.6 0.1 0.045 13.6 0.1 1.5 1 0 0 1 1 1 0 RuvB C-terminal winged helix domain QRPTase_C PF01729.19 gi|15921664|ref|NP_377333.1| - 1.3e-22 80.4 0.0 1.8e-22 79.9 0.0 1.2 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, C-terminal domain NAPRTase_C PF17956.1 gi|15921664|ref|NP_377333.1| - 3.2e-07 30.8 0.0 1.2e-06 28.9 0.0 1.9 1 1 1 2 2 2 1 Nicotinate phosphoribosyltransferase C-terminal domain QRPTase_N PF02749.16 gi|15921664|ref|NP_377333.1| - 0.00024 21.1 0.0 0.00047 20.1 0.0 1.5 1 0 0 1 1 1 1 Quinolinate phosphoribosyl transferase, N-terminal domain NAPRTase_N PF17767.1 gi|15921664|ref|NP_377333.1| - 0.18 12.2 0.0 1 9.8 0.0 2.0 1 1 1 2 2 2 0 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain MazE_antitoxin PF04014.18 gi|15921665|ref|NP_377334.1| - 6.1e-09 35.6 0.7 3.4e-08 33.2 0.0 2.6 3 0 0 3 3 3 1 Antidote-toxin recognition MazE, bacterial antitoxin PhoU PF01895.19 gi|15921665|ref|NP_377334.1| - 8.1e-05 23.0 3.6 8.1e-05 23.0 3.6 3.0 3 1 0 3 3 3 1 PhoU domain Cytochrom_B562 PF07361.11 gi|15921665|ref|NP_377334.1| - 0.076 13.7 0.2 0.24 12.1 0.1 1.8 2 0 0 2 2 2 0 Cytochrome b562 DUF711 PF05167.12 gi|15921666|ref|NP_377335.1| - 2.3e-27 96.0 0.0 3.1e-26 92.2 0.0 2.2 2 1 0 2 2 2 2 Uncharacterised ACR (DUF711) DrsE_2 PF13686.6 gi|15921667|ref|NP_377336.1| - 6.4e-16 58.6 1.3 9.5e-10 38.6 0.3 2.0 1 1 1 2 2 2 2 DsrE/DsrF/DrsH-like family DrsE PF02635.15 gi|15921667|ref|NP_377336.1| - 8.7e-09 35.8 0.1 1.2e-08 35.3 0.1 1.2 1 0 0 1 1 1 1 DsrE/DsrF-like family TusA PF01206.17 gi|15921668|ref|NP_377337.1| - 4e-13 49.0 0.1 4.7e-13 48.8 0.1 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA PALP PF00291.25 gi|15921669|ref|NP_377338.1| - 6e-52 176.9 0.0 1.3e-51 175.8 0.0 1.5 1 1 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme RIO1 PF01163.22 gi|15921670|ref|NP_377339.1| - 0.007 16.0 0.0 0.06 12.9 0.0 2.1 1 1 0 1 1 1 1 RIO1 family Pkinase PF00069.25 gi|15921670|ref|NP_377339.1| - 0.08 12.3 0.0 0.12 11.8 0.0 1.3 1 0 0 1 1 1 0 Protein kinase domain APH PF01636.23 gi|15921670|ref|NP_377339.1| - 0.11 12.4 0.0 1.3 8.8 0.0 1.9 1 1 1 2 2 2 0 Phosphotransferase enzyme family Mob_synth_C PF06463.13 gi|15921671|ref|NP_377340.1| - 1.2e-27 96.3 0.1 2.1e-27 95.5 0.1 1.4 1 0 0 1 1 1 1 Molybdenum Cofactor Synthesis C Radical_SAM PF04055.21 gi|15921671|ref|NP_377340.1| - 3.1e-22 79.7 0.1 1.7e-21 77.3 0.0 2.0 1 1 1 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|15921671|ref|NP_377340.1| - 3.4e-07 30.6 0.0 8.2e-07 29.4 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|15921671|ref|NP_377340.1| - 4.2e-06 26.9 0.0 1.1e-05 25.5 0.0 1.7 1 0 0 1 1 1 1 4Fe-4S single cluster domain Methyltrans_RNA PF04452.14 gi|15921671|ref|NP_377340.1| - 0.07 12.4 0.0 0.14 11.4 0.0 1.5 1 0 0 1 1 1 0 RNA methyltransferase Peptidase_M24 PF00557.24 gi|15921672|ref|NP_377341.1| - 6.5e-65 218.7 0.7 9e-65 218.3 0.7 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 gi|15921672|ref|NP_377341.1| - 4.6e-13 50.0 0.0 7.3e-13 49.3 0.0 1.3 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain DNA_pol3_a_NII PF11490.8 gi|15921672|ref|NP_377341.1| - 4.6 7.2 7.6 0.4 10.6 2.5 1.9 2 0 0 2 2 2 0 DNA polymerase III polC-type N-terminus II GTP_cyclohydroI PF01227.22 gi|15921673|ref|NP_377342.1| - 1.9e-62 209.8 0.1 2.5e-62 209.5 0.1 1.2 1 0 0 1 1 1 1 GTP cyclohydrolase I MarR PF01047.22 gi|15921674|ref|NP_377343.1| - 6.5e-09 35.6 0.3 1.6e-08 34.3 0.3 1.7 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|15921674|ref|NP_377343.1| - 1.4e-08 34.1 1.9 2.1e-08 33.6 0.7 2.1 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|15921674|ref|NP_377343.1| - 6.2e-08 32.4 0.0 1.1e-07 31.6 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.20 gi|15921674|ref|NP_377343.1| - 3.9e-06 26.6 0.4 1.8e-05 24.5 0.9 1.9 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family Cdc6_C PF09079.11 gi|15921674|ref|NP_377343.1| - 4.9e-05 23.2 0.1 0.0018 18.2 0.1 2.3 2 0 0 2 2 2 1 CDC6, C terminal winged helix domain HTH_IclR PF09339.10 gi|15921674|ref|NP_377343.1| - 0.00011 21.9 0.0 0.0002 21.1 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain TrmB PF01978.19 gi|15921674|ref|NP_377343.1| - 0.00013 21.7 0.2 0.00035 20.4 0.2 1.7 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_Crp_2 PF13545.6 gi|15921674|ref|NP_377343.1| - 0.00053 19.9 0.3 0.0019 18.2 0.2 1.9 1 1 1 2 2 2 1 Crp-like helix-turn-helix domain DprA_WH PF17782.1 gi|15921674|ref|NP_377343.1| - 0.0012 18.9 0.0 0.0021 18.1 0.0 1.3 1 0 0 1 1 1 1 DprA winged helix domain HTH_45 PF14947.6 gi|15921674|ref|NP_377343.1| - 0.0024 17.8 0.0 0.072 13.1 0.0 2.7 2 1 0 2 2 2 1 Winged helix-turn-helix Rio2_N PF09202.11 gi|15921674|ref|NP_377343.1| - 0.0076 16.4 0.1 0.018 15.2 0.1 1.6 1 0 0 1 1 1 1 Rio2, N-terminal HTH_27 PF13463.6 gi|15921674|ref|NP_377343.1| - 0.012 16.1 0.0 0.033 14.7 0.1 1.8 2 0 0 2 2 1 0 Winged helix DNA-binding domain B-block_TFIIIC PF04182.12 gi|15921674|ref|NP_377343.1| - 0.044 13.9 0.2 0.11 12.6 0.2 1.7 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC Glyco_trans_4_2 PF13477.6 gi|15921674|ref|NP_377343.1| - 0.076 13.0 0.0 0.77 9.8 0.0 2.1 2 0 0 2 2 2 0 Glycosyl transferase 4-like HTH_36 PF13730.6 gi|15921674|ref|NP_377343.1| - 0.092 12.7 0.3 0.27 11.2 0.2 1.8 1 1 0 1 1 1 0 Helix-turn-helix domain DUF2250 PF10007.9 gi|15921674|ref|NP_377343.1| - 0.11 12.6 0.2 0.36 11.0 0.1 1.9 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) HxlR PF01638.17 gi|15921674|ref|NP_377343.1| - 0.12 12.2 0.2 0.26 11.2 0.2 1.5 1 0 0 1 1 1 0 HxlR-like helix-turn-helix HTH_46 PF15977.5 gi|15921674|ref|NP_377343.1| - 0.15 12.1 2.7 0.24 11.5 1.0 2.1 2 0 0 2 2 2 0 Winged helix-turn-helix DNA binding Gln-synt_C PF00120.24 gi|15921675|ref|NP_377344.1| - 2.5e-134 447.7 0.0 4.5e-134 446.8 0.0 1.4 2 0 0 2 2 2 1 Glutamine synthetase, catalytic domain Gln-synt_N PF03951.19 gi|15921675|ref|NP_377344.1| - 6.6e-26 89.9 0.0 1.4e-25 88.8 0.0 1.6 1 0 0 1 1 1 1 Glutamine synthetase, beta-Grasp domain Thioredoxin PF00085.20 gi|15921676|ref|NP_377345.1| - 7.6e-23 80.5 0.1 8.3e-23 80.3 0.1 1.0 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|15921676|ref|NP_377345.1| - 1.5e-06 28.6 1.6 1.2e-05 25.7 1.6 1.9 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_8 PF13905.6 gi|15921676|ref|NP_377345.1| - 3.6e-05 24.0 0.2 0.021 15.1 0.0 2.3 1 1 1 2 2 2 2 Thioredoxin-like OST3_OST6 PF04756.13 gi|15921676|ref|NP_377345.1| - 3.8e-05 23.2 0.0 4.1e-05 23.1 0.0 1.1 1 0 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_3 PF13192.6 gi|15921676|ref|NP_377345.1| - 4.5e-05 23.4 0.1 5.7e-05 23.1 0.1 1.1 1 0 0 1 1 1 1 Thioredoxin domain Thioredoxin_9 PF14595.6 gi|15921676|ref|NP_377345.1| - 0.00015 21.5 0.1 0.00017 21.3 0.1 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_5 PF13743.6 gi|15921676|ref|NP_377345.1| - 0.0054 16.4 1.1 0.1 12.2 0.4 2.0 1 1 1 2 2 2 1 Thioredoxin Thioredoxin_7 PF13899.6 gi|15921676|ref|NP_377345.1| - 0.013 15.7 0.0 0.018 15.2 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin-like AhpC-TSA PF00578.21 gi|15921676|ref|NP_377345.1| - 0.034 14.1 0.5 7 6.6 0.3 2.1 1 1 1 2 2 2 0 AhpC/TSA family DSBA PF01323.20 gi|15921676|ref|NP_377345.1| - 0.048 13.4 1.4 0.3 10.9 0.0 2.0 1 1 1 2 2 2 0 DSBA-like thioredoxin domain Thioredoxin_6 PF13848.6 gi|15921676|ref|NP_377345.1| - 0.079 12.9 0.0 0.1 12.5 0.0 1.1 1 0 0 1 1 1 0 Thioredoxin-like domain HyaE PF07449.11 gi|15921676|ref|NP_377345.1| - 0.089 12.8 0.0 0.13 12.2 0.0 1.3 1 1 0 1 1 1 0 Hydrogenase-1 expression protein HyaE AMP-binding PF00501.28 gi|15921677|ref|NP_377346.1| - 1.5e-61 208.3 0.0 2.1e-61 207.8 0.0 1.2 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|15921677|ref|NP_377346.1| - 9.2e-11 42.6 0.4 2.4e-10 41.3 0.4 1.8 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain GHMP_kinases_C PF08544.13 gi|15921678|ref|NP_377347.1| - 0.00023 21.5 0.0 0.00043 20.6 0.0 1.4 1 0 0 1 1 1 1 GHMP kinases C terminal Methyltr_RsmB-F PF01189.17 gi|15921679|ref|NP_377348.1| - 1.3e-37 129.4 0.0 2.2e-35 122.1 0.0 2.2 1 1 1 2 2 2 2 16S rRNA methyltransferase RsmB/F Methyltransf_31 PF13847.6 gi|15921679|ref|NP_377348.1| - 7.2e-06 25.9 0.0 1.2e-05 25.1 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PUA PF01472.20 gi|15921679|ref|NP_377348.1| - 0.00063 19.6 2.8 0.0014 18.5 2.8 1.6 1 0 0 1 1 1 1 PUA domain MTS PF05175.14 gi|15921679|ref|NP_377348.1| - 0.0031 17.1 0.0 0.023 14.3 0.0 2.0 1 1 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 gi|15921679|ref|NP_377348.1| - 0.014 16.1 0.0 0.063 14.0 0.0 2.0 1 1 0 1 1 1 0 Methyltransferase domain Methyltransf_5 PF01795.19 gi|15921679|ref|NP_377348.1| - 0.015 14.9 0.0 0.028 13.9 0.0 1.4 1 0 0 1 1 1 0 MraW methylase family CMAS PF02353.20 gi|15921679|ref|NP_377348.1| - 0.018 14.4 0.1 2.6 7.3 0.0 2.2 2 0 0 2 2 2 0 Mycolic acid cyclopropane synthetase Methyltransf_4 PF02390.17 gi|15921679|ref|NP_377348.1| - 0.031 13.7 0.2 0.14 11.6 0.0 2.1 2 1 0 2 2 2 0 Putative methyltransferase UPF0113 PF03657.13 gi|15921679|ref|NP_377348.1| - 0.14 12.4 4.0 0.19 12.0 2.2 2.1 2 0 0 2 2 2 0 UPF0113 PUA domain Hexapep PF00132.24 gi|15921680|ref|NP_377349.1| - 2.8e-22 77.5 15.3 6e-09 35.3 2.2 4.3 2 1 2 4 4 4 4 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|15921680|ref|NP_377349.1| - 2e-08 33.8 12.4 2.7e-05 23.8 3.8 4.1 4 0 0 4 4 4 3 Hexapeptide repeat of succinyl-transferase Phage_integrase PF00589.22 gi|15921682|ref|NP_377351.1| - 1.4e-38 132.4 1.3 1.4e-38 132.4 1.3 1.8 2 0 0 2 2 2 1 Phage integrase family Phage_int_SAM_4 PF13495.6 gi|15921682|ref|NP_377351.1| - 1.1e-08 35.4 1.2 0.00013 22.4 0.0 2.9 2 1 1 3 3 3 2 Phage integrase, N-terminal SAM-like domain Phage_int_SAM_1 PF02899.17 gi|15921682|ref|NP_377351.1| - 3.8e-06 27.1 0.5 0.1 12.9 0.0 3.2 2 1 1 3 3 3 2 Phage integrase, N-terminal SAM-like domain Integrase_1 PF12835.7 gi|15921682|ref|NP_377351.1| - 0.0013 18.9 1.0 0.0013 18.9 1.0 1.7 2 0 0 2 2 2 1 Integrase Ribosomal_L19e PF01280.20 gi|15921682|ref|NP_377351.1| - 0.14 12.2 0.1 0.14 12.2 0.1 2.5 3 0 0 3 3 3 0 Ribosomal protein L19e Pyr_redox_2 PF07992.14 gi|15921683|ref|NP_377352.1| - 5.4e-06 25.8 0.1 0.00095 18.5 0.3 3.4 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|15921683|ref|NP_377352.1| - 0.072 13.7 0.1 5.4 7.6 0.0 2.7 2 1 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase VitK2_biosynth PF02621.14 gi|15921684|ref|NP_377353.1| - 0.03 13.8 0.0 5 6.5 0.0 3.0 1 1 2 3 3 3 0 Menaquinone biosynthesis T2SSE PF00437.20 gi|15921686|ref|NP_377355.1| - 8.4e-40 136.5 0.0 1.3e-39 136.0 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein ABC_tran PF00005.27 gi|15921686|ref|NP_377355.1| - 0.00014 22.4 0.0 0.00054 20.5 0.0 2.0 2 1 0 2 2 2 1 ABC transporter AAA_16 PF13191.6 gi|15921686|ref|NP_377355.1| - 0.00015 22.2 0.0 0.00031 21.2 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|15921686|ref|NP_377355.1| - 0.00075 19.2 0.1 0.0024 17.6 0.0 1.9 2 0 0 2 2 2 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|15921686|ref|NP_377355.1| - 0.0021 18.6 4.7 0.0022 18.5 0.1 2.6 3 0 0 3 3 3 1 AAA domain SMC_N PF02463.19 gi|15921686|ref|NP_377355.1| - 0.012 15.1 0.0 0.048 13.1 0.0 2.0 2 0 0 2 2 2 0 RecF/RecN/SMC N terminal domain AAA_22 PF13401.6 gi|15921686|ref|NP_377355.1| - 0.012 15.9 0.0 0.028 14.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain Adeno_IVa2 PF02456.15 gi|15921686|ref|NP_377355.1| - 0.018 13.9 0.0 0.029 13.2 0.0 1.3 1 0 0 1 1 1 0 Adenovirus IVa2 protein AAA_21 PF13304.6 gi|15921686|ref|NP_377355.1| - 0.022 14.6 0.3 0.022 14.6 0.3 2.1 2 0 0 2 2 2 0 AAA domain, putative AbiEii toxin, Type IV TA system AAA_7 PF12775.7 gi|15921686|ref|NP_377355.1| - 0.029 13.9 0.0 0.081 12.4 0.0 1.7 1 0 0 1 1 1 0 P-loop containing dynein motor region cobW PF02492.19 gi|15921686|ref|NP_377355.1| - 0.034 13.8 0.0 0.069 12.7 0.0 1.5 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_5 PF07728.14 gi|15921686|ref|NP_377355.1| - 0.043 13.8 0.0 0.086 12.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) RNA12 PF10443.9 gi|15921686|ref|NP_377355.1| - 0.048 12.4 0.0 0.13 11.0 0.0 1.6 2 0 0 2 2 2 0 RNA12 protein RsgA_GTPase PF03193.16 gi|15921686|ref|NP_377355.1| - 0.13 12.1 0.0 2.9 7.8 0.0 2.3 2 0 0 2 2 2 0 RsgA GTPase Pilin_N PF07790.11 gi|15921688|ref|NP_377357.1| - 0.0004 21.2 3.2 0.0017 19.3 3.2 1.9 1 1 0 1 1 1 1 Archaeal Type IV pilin, N-terminal Wzy_C PF04932.15 gi|15921688|ref|NP_377357.1| - 0.008 15.8 0.4 0.0096 15.6 0.4 1.1 1 0 0 1 1 1 1 O-Antigen ligase HhH-GPD PF00730.25 gi|15921690|ref|NP_377359.1| - 8.4e-22 77.7 0.0 1.6e-21 76.8 0.0 1.5 1 1 0 1 1 1 1 HhH-GPD superfamily base excision DNA repair protein EndIII_4Fe-2S PF10576.9 gi|15921690|ref|NP_377359.1| - 0.00033 20.9 0.8 0.00068 19.9 0.8 1.5 1 0 0 1 1 1 1 Iron-sulfur binding domain of endonuclease III HHH PF00633.23 gi|15921690|ref|NP_377359.1| - 0.0014 18.4 0.9 0.013 15.3 0.0 2.9 3 1 0 3 3 3 1 Helix-hairpin-helix motif NCD1 PF04904.13 gi|15921690|ref|NP_377359.1| - 0.0082 16.1 0.0 0.066 13.2 0.0 2.3 2 0 0 2 2 2 1 NAB conserved region 1 (NCD1) HHH_5 PF14520.6 gi|15921690|ref|NP_377359.1| - 0.098 13.3 1.6 4.5 7.9 0.0 2.8 2 1 1 3 3 3 0 Helix-hairpin-helix domain ParBc PF02195.18 gi|15921691|ref|NP_377360.1| - 1.4e-07 31.7 0.0 3e-07 30.6 0.0 1.5 2 0 0 2 2 2 1 ParB-like nuclease domain DUF1015 PF06245.11 gi|15921691|ref|NP_377360.1| - 0.00025 20.1 0.1 0.11 11.3 0.0 2.4 2 1 0 2 2 2 2 Protein of unknown function (DUF1015) ParBc_2 PF08857.11 gi|15921691|ref|NP_377360.1| - 0.13 12.4 0.0 0.17 12.0 0.0 1.2 1 0 0 1 1 1 0 Putative ParB-like nuclease Glyco_trans_2_3 PF13632.6 gi|15921692|ref|NP_377361.1| - 2.9e-21 76.3 0.1 2.9e-21 76.3 0.1 2.2 2 0 0 2 2 2 1 Glycosyl transferase family group 2 Glycos_transf_2 PF00535.26 gi|15921692|ref|NP_377361.1| - 2.1e-19 70.0 0.0 3.2e-19 69.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|15921692|ref|NP_377361.1| - 3.2e-14 53.4 0.0 5.2e-14 52.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|15921692|ref|NP_377361.1| - 6.8e-12 45.4 0.1 9.6e-12 44.9 0.1 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_21 PF13506.6 gi|15921692|ref|NP_377361.1| - 1.9e-11 43.8 0.0 3.1e-11 43.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 21 DEAD_assoc PF08494.11 gi|15921693|ref|NP_377362.1| - 4e-54 183.3 0.0 7.5e-54 182.4 0.0 1.5 1 0 0 1 1 1 1 DEAD/H associated DEAD PF00270.29 gi|15921693|ref|NP_377362.1| - 7e-28 97.6 0.0 2.1e-26 92.8 0.0 2.6 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|15921693|ref|NP_377362.1| - 4.8e-19 68.7 0.3 5.8e-18 65.3 0.1 2.5 2 0 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|15921693|ref|NP_377362.1| - 3.1e-09 37.0 0.0 1.7e-08 34.6 0.0 2.2 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit Transketolase_C PF02780.20 gi|15921693|ref|NP_377362.1| - 1.2e-05 25.2 1.3 0.0017 18.2 0.1 2.5 2 0 0 2 2 2 2 Transketolase, C-terminal domain Phage_ABA_S PF18066.1 gi|15921693|ref|NP_377362.1| - 0.0048 17.6 1.0 8.4 7.2 0.0 4.1 4 0 0 4 4 4 1 Phage ABA sandwich domain AAA_19 PF13245.6 gi|15921693|ref|NP_377362.1| - 0.014 15.8 0.0 2.1 8.7 0.0 3.0 2 1 0 2 2 2 0 AAA domain RPAP1_N PF08621.10 gi|15921693|ref|NP_377362.1| - 0.072 12.9 1.4 0.14 12.0 0.2 2.1 2 0 0 2 2 2 0 RPAP1-like, N-terminal HrcA_DNA-bdg PF03444.15 gi|15921694|ref|NP_377363.1| - 1.2e-34 117.8 0.3 3e-34 116.5 0.3 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding CBS PF00571.28 gi|15921694|ref|NP_377363.1| - 1.2e-25 89.8 0.4 2.8e-11 43.7 0.3 2.7 2 0 0 2 2 2 2 CBS domain Rrf2 PF02082.20 gi|15921694|ref|NP_377363.1| - 2.5e-08 34.1 0.1 8.4e-08 32.5 0.0 1.9 2 0 0 2 2 2 1 Transcriptional regulator HTH_IclR PF09339.10 gi|15921694|ref|NP_377363.1| - 0.067 13.0 0.0 0.16 11.8 0.0 1.7 1 0 0 1 1 1 0 IclR helix-turn-helix domain PRC PF05239.16 gi|15921694|ref|NP_377363.1| - 0.23 11.6 9.0 14 5.9 0.1 4.2 4 0 0 4 4 4 0 PRC-barrel domain DUF2192 PF09958.9 gi|15921695|ref|NP_377364.1| - 1.2e-83 280.2 5.9 1.3e-83 280.0 5.9 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2192) Snapin_Pallidin PF14712.6 gi|15921697|ref|NP_377366.1| - 0.039 14.4 0.9 0.052 14.0 0.9 1.2 1 0 0 1 1 1 0 Snapin/Pallidin HIP1_clath_bdg PF16515.5 gi|15921697|ref|NP_377366.1| - 0.072 13.7 0.1 0.1 13.2 0.1 1.2 1 0 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 bZIP_1 PF00170.21 gi|15921697|ref|NP_377366.1| - 0.21 11.7 2.0 0.35 11.0 2.0 1.3 1 0 0 1 1 1 0 bZIP transcription factor Fzo_mitofusin PF04799.13 gi|15921697|ref|NP_377366.1| - 0.27 10.8 1.2 0.38 10.3 1.1 1.3 1 1 0 1 1 1 0 fzo-like conserved region HTH_3 PF01381.22 gi|15921698|ref|NP_377367.1| - 2.2e-09 37.2 0.1 3.8e-09 36.5 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|15921698|ref|NP_377367.1| - 2.5e-05 24.5 0.0 3.2e-05 24.2 0.0 1.1 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 gi|15921698|ref|NP_377367.1| - 4.8e-05 23.0 0.0 9.5e-05 22.1 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain HTH_Tnp_ISL3 PF13542.6 gi|15921698|ref|NP_377367.1| - 5.5e-05 22.5 0.0 0.00019 20.7 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain of transposase family ISL3 HTH_28 PF13518.6 gi|15921698|ref|NP_377367.1| - 0.00012 22.1 0.0 0.00025 21.1 0.0 1.5 2 0 0 2 2 1 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|15921698|ref|NP_377367.1| - 0.00028 20.8 0.2 0.00078 19.4 0.1 1.9 1 1 1 2 2 2 1 Helix-turn-helix domain YdaS_antitoxin PF15943.5 gi|15921698|ref|NP_377367.1| - 0.00043 20.1 0.0 0.00076 19.3 0.0 1.5 1 1 0 1 1 1 1 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_11 PF08279.12 gi|15921698|ref|NP_377367.1| - 0.00076 19.4 0.7 0.0021 17.9 0.1 2.0 2 0 0 2 2 2 1 HTH domain MarR_2 PF12802.7 gi|15921698|ref|NP_377367.1| - 0.0012 18.7 0.0 0.0018 18.1 0.0 1.4 1 0 0 1 1 1 1 MarR family Fe_dep_repress PF01325.19 gi|15921698|ref|NP_377367.1| - 0.0013 18.8 0.1 0.012 15.7 0.0 2.1 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain HTH_24 PF13412.6 gi|15921698|ref|NP_377367.1| - 0.0016 17.9 2.2 0.0018 17.8 0.1 2.2 2 1 0 2 2 2 1 Winged helix-turn-helix DNA-binding Trp_repressor PF01371.19 gi|15921698|ref|NP_377367.1| - 0.0017 18.4 0.0 0.0032 17.6 0.0 1.5 1 1 0 1 1 1 1 Trp repressor protein HTH_10 PF04967.12 gi|15921698|ref|NP_377367.1| - 0.0029 17.4 0.0 0.0065 16.2 0.0 1.6 1 0 0 1 1 1 1 HTH DNA binding domain KORA PF16509.5 gi|15921698|ref|NP_377367.1| - 0.0029 17.8 0.1 0.0071 16.6 0.0 1.8 1 1 1 2 2 2 1 TrfB plasmid transcriptional repressor HTH_5 PF01022.20 gi|15921698|ref|NP_377367.1| - 0.003 17.4 0.1 0.007 16.2 0.1 1.7 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family LacI PF00356.21 gi|15921698|ref|NP_377367.1| - 0.0039 17.0 0.0 0.027 14.2 0.0 2.3 3 1 1 4 4 3 1 Bacterial regulatory proteins, lacI family HTH_AsnC-type PF13404.6 gi|15921698|ref|NP_377367.1| - 0.0042 16.9 0.6 0.057 13.3 0.6 2.3 1 1 0 1 1 1 1 AsnC-type helix-turn-helix domain IF2_N PF04760.15 gi|15921698|ref|NP_377367.1| - 0.01 15.6 0.2 0.068 13.0 0.2 2.3 1 1 0 1 1 1 0 Translation initiation factor IF-2, N-terminal region Sigma70_r4_2 PF08281.12 gi|15921698|ref|NP_377367.1| - 0.011 15.4 0.1 0.021 14.5 0.1 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_38 PF13936.6 gi|15921698|ref|NP_377367.1| - 0.012 15.4 0.2 0.012 15.4 0.2 1.9 2 1 0 3 3 3 0 Helix-turn-helix domain HTH_7 PF02796.15 gi|15921698|ref|NP_377367.1| - 0.017 15.2 0.0 0.033 14.3 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase Raco_middle PF17651.1 gi|15921698|ref|NP_377367.1| - 0.021 14.5 0.6 0.026 14.2 0.5 1.3 1 1 0 1 1 1 0 RACo middle region HTH_Crp_2 PF13545.6 gi|15921698|ref|NP_377367.1| - 0.031 14.2 0.1 0.076 13.0 0.1 1.8 1 1 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_26 PF13443.6 gi|15921698|ref|NP_377367.1| - 0.031 14.7 0.0 0.055 13.9 0.0 1.4 1 0 0 1 1 1 0 Cro/C1-type HTH DNA-binding domain MarR PF01047.22 gi|15921698|ref|NP_377367.1| - 0.042 13.8 0.0 0.085 12.8 0.0 1.5 1 0 0 1 1 1 0 MarR family HTH_Tnp_1 PF01527.20 gi|15921698|ref|NP_377367.1| - 0.042 14.2 0.1 0.11 12.8 0.1 1.7 1 1 0 1 1 1 0 Transposase HTH_50 PF18024.1 gi|15921698|ref|NP_377367.1| - 0.043 13.4 0.3 0.14 11.8 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain TnsD PF15978.5 gi|15921698|ref|NP_377367.1| - 0.058 12.4 0.2 0.057 12.4 0.2 1.1 1 0 0 1 1 1 0 Tn7-like transposition protein D HTH_29 PF13551.6 gi|15921698|ref|NP_377367.1| - 0.067 13.2 0.0 0.12 12.5 0.0 1.4 1 0 0 1 1 1 0 Winged helix-turn helix HTH_32 PF13565.6 gi|15921698|ref|NP_377367.1| - 0.079 13.6 0.6 0.34 11.5 0.1 2.1 1 1 1 2 2 2 0 Homeodomain-like domain HTH_IclR PF09339.10 gi|15921698|ref|NP_377367.1| - 0.11 12.3 0.0 0.22 11.4 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain Aminotran_1_2 PF00155.21 gi|15921700|ref|NP_377369.1| - 3.2e-38 131.8 0.0 3.7e-38 131.7 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_MocR PF12897.7 gi|15921700|ref|NP_377369.1| - 7.2e-14 51.4 0.0 1.1e-13 50.8 0.0 1.2 1 0 0 1 1 1 1 Alanine-glyoxylate amino-transferase Beta_elim_lyase PF01212.21 gi|15921700|ref|NP_377369.1| - 0.01 15.2 0.0 0.029 13.6 0.0 1.7 2 1 0 3 3 3 0 Beta-eliminating lyase DegT_DnrJ_EryC1 PF01041.17 gi|15921700|ref|NP_377369.1| - 0.014 14.7 0.0 0.024 14.0 0.0 1.3 1 0 0 1 1 1 0 DegT/DnrJ/EryC1/StrS aminotransferase family Cys_Met_Meta_PP PF01053.20 gi|15921700|ref|NP_377369.1| - 0.029 12.9 0.0 0.04 12.4 0.0 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme MoCF_biosynth PF00994.24 gi|15921702|ref|NP_377371.1| - 8.2e-33 113.1 0.4 1.5e-32 112.2 0.1 1.5 2 0 0 2 2 2 1 Probable molybdopterin binding domain VirArc_Nuclease PF12187.8 gi|15921702|ref|NP_377371.1| - 0.0083 15.7 0.1 0.017 14.7 0.0 1.5 2 0 0 2 2 2 1 Viral/Archaeal nuclease PrpR_N PF06506.11 gi|15921702|ref|NP_377371.1| - 0.03 13.9 0.1 0.26 10.8 0.0 2.2 2 0 0 2 2 2 0 Propionate catabolism activator Abhydrolase_1 PF00561.20 gi|15921703|ref|NP_377372.1| - 3.3e-25 89.2 0.0 1.5e-19 70.7 0.0 2.0 1 1 1 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|15921703|ref|NP_377372.1| - 1.8e-17 63.4 0.0 2.3e-17 63.1 0.0 1.1 1 0 0 1 1 1 1 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 gi|15921703|ref|NP_377372.1| - 5.4e-16 59.9 0.0 6.7e-16 59.6 0.0 1.1 1 0 0 1 1 1 1 Alpha/beta hydrolase family Thioesterase PF00975.20 gi|15921703|ref|NP_377372.1| - 9.1e-05 22.7 0.0 0.00013 22.1 0.0 1.3 1 0 0 1 1 1 1 Thioesterase domain Abhydrolase_5 PF12695.7 gi|15921703|ref|NP_377372.1| - 0.0029 17.4 0.1 0.28 10.9 0.0 2.2 2 0 0 2 2 2 1 Alpha/beta hydrolase family Ndr PF03096.14 gi|15921703|ref|NP_377372.1| - 0.023 13.4 0.0 0.055 12.2 0.0 1.6 1 1 0 1 1 1 0 Ndr family DUF915 PF06028.11 gi|15921703|ref|NP_377372.1| - 0.045 13.1 0.1 0.21 10.9 0.0 2.0 2 0 0 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF915) tRNA_synthFbeta PF17759.1 gi|15921704|ref|NP_377373.1| - 9.4e-39 133.1 0.0 1.4e-38 132.5 0.0 1.2 1 0 0 1 1 1 1 Phenylalanyl tRNA synthetase beta chain CLM domain B5 PF03484.15 gi|15921704|ref|NP_377373.1| - 2.1e-20 72.8 1.8 1.1e-17 64.1 0.3 2.8 2 0 0 2 2 2 2 tRNA synthetase B5 domain B3_4 PF03483.17 gi|15921704|ref|NP_377373.1| - 1.9e-12 47.2 0.1 4.3e-12 46.0 0.1 1.5 1 0 0 1 1 1 1 B3/4 domain PhetRS_B1 PF18262.1 gi|15921704|ref|NP_377373.1| - 7.4e-05 22.9 0.7 0.0042 17.3 0.1 3.5 2 2 0 2 2 2 1 Phe-tRNA synthetase beta subunit B1 domain tRNA-synt_2d PF01409.20 gi|15921704|ref|NP_377373.1| - 0.1 12.0 0.0 0.2 11.1 0.0 1.4 1 0 0 1 1 1 0 tRNA synthetases class II core domain (F) tRNA-synt_2d PF01409.20 gi|15921705|ref|NP_377374.1| - 1.6e-83 280.0 0.0 2.3e-83 279.4 0.0 1.3 1 0 0 1 1 1 1 tRNA synthetases class II core domain (F) tRNA_synthFbeta PF17759.1 gi|15921705|ref|NP_377374.1| - 2.2e-10 40.3 0.0 5.9e-08 32.4 0.0 2.5 3 0 0 3 3 3 1 Phenylalanyl tRNA synthetase beta chain CLM domain TrmB PF01978.19 gi|15921705|ref|NP_377374.1| - 1.3e-08 34.6 1.6 1.3e-08 34.6 1.6 2.8 3 0 0 3 3 2 1 Sugar-specific transcriptional regulator TrmB tRNA-synt_2 PF00152.20 gi|15921705|ref|NP_377374.1| - 2.7e-07 30.0 0.1 0.031 13.4 0.0 3.2 3 0 0 3 3 3 2 tRNA synthetases class II (D, K and N) HTH_24 PF13412.6 gi|15921705|ref|NP_377374.1| - 1.8e-05 24.2 0.4 1.8e-05 24.2 0.4 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_34 PF13601.6 gi|15921705|ref|NP_377374.1| - 2.4e-05 24.4 0.1 6.7e-05 23.0 0.1 1.7 1 0 0 1 1 1 1 Winged helix DNA-binding domain DUF2250 PF10007.9 gi|15921705|ref|NP_377374.1| - 0.00031 20.8 1.0 0.00031 20.8 1.0 2.4 2 0 0 2 2 2 1 Uncharacterized protein conserved in archaea (DUF2250) HBS1_N PF08938.10 gi|15921705|ref|NP_377374.1| - 0.003 17.8 0.3 0.3 11.4 0.0 2.6 2 0 0 2 2 2 1 HBS1 N-terminus HTH_45 PF14947.6 gi|15921705|ref|NP_377374.1| - 0.0083 16.1 0.2 0.0083 16.1 0.2 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix MarR PF01047.22 gi|15921705|ref|NP_377374.1| - 0.0096 15.8 0.1 0.0096 15.8 0.1 2.1 2 0 0 2 2 2 1 MarR family HTH_27 PF13463.6 gi|15921705|ref|NP_377374.1| - 0.024 15.1 0.0 0.16 12.5 0.0 2.4 2 0 0 2 2 2 0 Winged helix DNA-binding domain FeoC PF09012.10 gi|15921705|ref|NP_377374.1| - 0.026 14.6 0.1 0.057 13.5 0.1 1.5 1 0 0 1 1 1 0 FeoC like transcriptional regulator Penicillinase_R PF03965.16 gi|15921705|ref|NP_377374.1| - 0.029 14.7 0.1 0.33 11.3 0.2 2.4 2 0 0 2 2 2 0 Penicillinase repressor HTH_6 PF01418.17 gi|15921705|ref|NP_377374.1| - 0.045 13.7 0.2 0.11 12.6 0.2 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain, rpiR family Phage_rep_org_N PF09681.10 gi|15921705|ref|NP_377374.1| - 0.048 13.6 0.1 0.15 12.0 0.1 1.8 1 0 0 1 1 1 0 N-terminal phage replisome organiser (Phage_rep_org_N) HTH_IclR PF09339.10 gi|15921705|ref|NP_377374.1| - 0.05 13.4 0.0 0.16 11.8 0.0 1.9 1 0 0 1 1 1 0 IclR helix-turn-helix domain TFIIE_alpha PF02002.17 gi|15921705|ref|NP_377374.1| - 0.065 13.1 3.7 0.27 11.1 2.8 2.5 2 0 0 2 2 2 0 TFIIE alpha subunit Rrf2 PF02082.20 gi|15921705|ref|NP_377374.1| - 0.068 13.5 0.1 0.19 12.1 0.1 1.7 1 0 0 1 1 1 0 Transcriptional regulator F-112 PF09645.10 gi|15921705|ref|NP_377374.1| - 0.07 13.2 0.3 0.16 12.1 0.3 1.6 1 0 0 1 1 1 0 F-112 protein MarR_2 PF12802.7 gi|15921705|ref|NP_377374.1| - 0.074 12.9 0.0 0.27 11.2 0.0 2.0 1 0 0 1 1 1 0 MarR family HTH_5 PF01022.20 gi|15921705|ref|NP_377374.1| - 0.12 12.3 0.3 1.4 8.9 0.1 2.6 2 0 0 2 2 2 0 Bacterial regulatory protein, arsR family B-block_TFIIIC PF04182.12 gi|15921705|ref|NP_377374.1| - 0.26 11.4 2.6 1.3 9.2 0.2 2.9 3 0 0 3 3 3 0 B-block binding subunit of TFIIIC Lactamase_B_3 PF13483.6 gi|15921707|ref|NP_377376.1| - 4.7e-20 72.1 0.1 6.5e-20 71.6 0.1 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|15921707|ref|NP_377376.1| - 3.2e-19 69.3 0.0 3.8e-19 69.0 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|15921707|ref|NP_377376.1| - 2.1e-06 27.9 0.8 7.3e-06 26.1 0.8 1.7 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Peptidase_M24 PF00557.24 gi|15921708|ref|NP_377377.1| - 2.2e-42 145.1 0.0 2.6e-42 144.9 0.0 1.1 1 0 0 1 1 1 1 Metallopeptidase family M24 DUF1512 PF07431.12 gi|15921709|ref|NP_377378.1| - 1.2e-147 491.6 9.6 1.4e-147 491.4 9.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1512) HD PF01966.22 gi|15921710|ref|NP_377379.1| - 1.9e-07 31.3 0.5 7.2e-07 29.5 0.1 2.0 2 0 0 2 2 2 1 HD domain Hydrolase_3 PF08282.12 gi|15921711|ref|NP_377380.1| - 1.8e-20 73.7 0.7 2.1e-20 73.6 0.7 1.0 1 0 0 1 1 1 1 haloacid dehalogenase-like hydrolase S6PP PF05116.13 gi|15921711|ref|NP_377380.1| - 3e-06 26.9 0.0 3.1e-06 26.9 0.0 1.0 1 0 0 1 1 1 1 Sucrose-6F-phosphate phosphohydrolase HAD_2 PF13419.6 gi|15921711|ref|NP_377380.1| - 0.00075 19.6 0.0 0.0013 18.8 0.0 1.4 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|15921711|ref|NP_377380.1| - 0.0065 16.5 0.0 0.0096 16.0 0.0 1.3 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase PF00702.26 gi|15921711|ref|NP_377380.1| - 0.04 14.2 0.0 0.06 13.6 0.0 1.3 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase tRNA-synt_1c PF00749.21 gi|15921712|ref|NP_377381.1| - 2.2e-82 276.5 0.2 6.5e-82 274.9 0.0 1.8 2 0 0 2 2 2 1 tRNA synthetases class I (E and Q), catalytic domain tRNA-synt_1c_C PF03950.18 gi|15921712|ref|NP_377381.1| - 2.6e-23 82.8 0.0 6.6e-23 81.5 0.0 1.7 1 0 0 1 1 1 1 tRNA synthetases class I (E and Q), anti-codon binding domain tRNA-synt_1e PF01406.19 gi|15921712|ref|NP_377381.1| - 0.0064 15.9 0.1 0.025 13.9 0.1 2.1 1 1 0 1 1 1 1 tRNA synthetases class I (C) catalytic domain DRY_EERY PF09750.9 gi|15921712|ref|NP_377381.1| - 0.064 13.5 0.1 0.14 12.4 0.1 1.6 1 0 0 1 1 1 0 Alternative splicing regulator DUF4635 PF15466.6 gi|15921712|ref|NP_377381.1| - 0.1 12.1 0.9 0.39 10.2 0.3 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF4635) Ribosomal_L7Ae PF01248.26 gi|15921713|ref|NP_377382.1| - 6.1e-34 115.6 1.5 7.5e-34 115.4 1.5 1.1 1 0 0 1 1 1 1 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family PELOTA_1 PF15608.6 gi|15921713|ref|NP_377382.1| - 1.8e-05 24.5 0.1 2.5e-05 24.0 0.1 1.2 1 0 0 1 1 1 1 PELOTA RNA binding domain RNase_P_pop3 PF08228.11 gi|15921713|ref|NP_377382.1| - 0.00078 19.5 0.0 0.00092 19.3 0.0 1.1 1 0 0 1 1 1 1 RNase P subunit Pop3 DUF1269 PF06897.12 gi|15921713|ref|NP_377382.1| - 0.048 14.0 0.4 1.6 9.1 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1269) Cornifin PF02389.15 gi|15921713|ref|NP_377382.1| - 0.098 12.9 0.2 0.13 12.4 0.2 1.3 1 0 0 1 1 1 0 Cornifin (SPRR) family DbpA PF03880.15 gi|15921713|ref|NP_377382.1| - 0.11 12.6 0.6 0.53 10.3 0.1 2.3 2 1 1 3 3 3 0 DbpA RNA binding domain Glycos_transf_1 PF00534.20 gi|15921714|ref|NP_377383.1| - 1.8e-11 43.9 0.2 2.9e-11 43.2 0.2 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|15921714|ref|NP_377383.1| - 2.5e-09 37.7 0.0 3.9e-09 37.1 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|15921714|ref|NP_377383.1| - 0.00011 22.3 0.0 0.00038 20.5 0.0 1.9 1 1 0 1 1 1 1 Glycosyltransferase Family 4 P22_AR_C PF10548.9 gi|15921714|ref|NP_377383.1| - 0.057 13.6 0.8 0.21 11.8 0.1 2.3 3 0 0 3 3 3 0 P22AR C-terminal domain DNA_pol_B PF00136.21 gi|15921715|ref|NP_377384.1| - 3.6e-53 180.9 3.3 3.6e-53 180.9 3.3 2.1 2 0 0 2 2 2 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.19 gi|15921715|ref|NP_377384.1| - 8.5e-31 107.3 4.8 8.5e-31 107.3 4.8 2.2 2 0 0 2 2 2 1 DNA polymerase family B, exonuclease domain DNA_pol_B_exo2 PF10108.9 gi|15921715|ref|NP_377384.1| - 8.1e-07 28.9 0.0 2e-06 27.7 0.0 1.6 1 0 0 1 1 1 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB RNase_H_2 PF13482.6 gi|15921715|ref|NP_377384.1| - 9.1e-07 29.0 4.1 4.9e-06 26.6 0.9 3.2 3 1 0 3 3 3 1 RNase_H superfamily ACT_6 PF13740.6 gi|15921715|ref|NP_377384.1| - 0.16 11.9 0.0 0.45 10.5 0.0 1.7 1 0 0 1 1 1 0 ACT domain DUF2286 PF10051.9 gi|15921716|ref|NP_377385.1| - 1.9e-53 179.9 6.8 2.3e-53 179.7 6.8 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2286) PDDEXK_10 PF07788.11 gi|15921716|ref|NP_377385.1| - 0.00053 19.9 0.1 0.0018 18.2 0.0 1.9 2 0 0 2 2 2 1 PD-(D/E)XK nuclease superfamily Methyltransf_31 PF13847.6 gi|15921717|ref|NP_377386.1| - 4.5e-11 42.8 0.0 7.1e-11 42.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain PrmA PF06325.13 gi|15921717|ref|NP_377386.1| - 1.3e-09 37.9 0.2 1.7e-09 37.5 0.2 1.0 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_4 PF02390.17 gi|15921717|ref|NP_377386.1| - 1.6e-08 34.2 0.2 2.2e-08 33.8 0.2 1.2 1 0 0 1 1 1 1 Putative methyltransferase DOT1 PF08123.13 gi|15921717|ref|NP_377386.1| - 1.8e-08 34.2 0.0 8.8e-08 31.9 0.0 1.8 1 1 0 1 1 1 1 Histone methylation protein DOT1 Methyltransf_25 PF13649.6 gi|15921717|ref|NP_377386.1| - 2.2e-08 34.7 0.0 3.3e-08 34.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_18 PF12847.7 gi|15921717|ref|NP_377386.1| - 1.1e-07 31.9 0.2 1.3e-07 31.6 0.2 1.3 1 1 0 1 1 1 1 Methyltransferase domain CMAS PF02353.20 gi|15921717|ref|NP_377386.1| - 9.6e-07 28.4 0.0 1.1e-06 28.1 0.0 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase Methyltransf_15 PF09445.10 gi|15921717|ref|NP_377386.1| - 3.1e-05 23.6 0.3 5.1e-05 22.9 0.2 1.3 1 1 0 1 1 1 1 RNA cap guanine-N2 methyltransferase Met_10 PF02475.16 gi|15921717|ref|NP_377386.1| - 5.5e-05 23.0 0.2 6.5e-05 22.8 0.2 1.2 1 0 0 1 1 1 1 Met-10+ like-protein MTS PF05175.14 gi|15921717|ref|NP_377386.1| - 5.6e-05 22.8 0.0 7.6e-05 22.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_11 PF08241.12 gi|15921717|ref|NP_377386.1| - 0.00015 22.4 0.0 0.00022 21.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|15921717|ref|NP_377386.1| - 0.00027 21.6 0.1 0.00058 20.6 0.1 1.7 1 1 0 1 1 1 1 Methyltransferase domain tRNA_U5-meth_tr PF05958.11 gi|15921717|ref|NP_377386.1| - 0.00033 19.8 0.0 0.00039 19.5 0.0 1.2 1 0 0 1 1 1 1 tRNA (Uracil-5-)-methyltransferase TrmK PF04816.12 gi|15921717|ref|NP_377386.1| - 0.001 18.7 0.3 0.0041 16.7 0.1 1.8 1 1 1 2 2 2 1 tRNA (adenine(22)-N(1))-methyltransferase N6_Mtase PF02384.16 gi|15921717|ref|NP_377386.1| - 0.0013 18.1 0.0 0.0016 17.8 0.0 1.1 1 0 0 1 1 1 1 N-6 DNA Methylase MetW PF07021.12 gi|15921717|ref|NP_377386.1| - 0.002 17.8 0.0 0.0025 17.4 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW TehB PF03848.14 gi|15921717|ref|NP_377386.1| - 0.0038 16.7 0.1 0.005 16.3 0.1 1.2 1 0 0 1 1 1 1 Tellurite resistance protein TehB N6_N4_Mtase PF01555.18 gi|15921717|ref|NP_377386.1| - 0.0047 16.7 0.0 0.0088 15.8 0.0 1.4 2 0 0 2 2 2 1 DNA methylase Methyltransf_23 PF13489.6 gi|15921717|ref|NP_377386.1| - 0.011 15.6 0.0 0.016 15.1 0.0 1.5 1 1 0 1 1 1 0 Methyltransferase domain PCMT PF01135.19 gi|15921717|ref|NP_377386.1| - 0.02 14.7 0.0 0.024 14.4 0.0 1.3 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) EF-hand_14 PF17959.1 gi|15921717|ref|NP_377386.1| - 0.049 14.0 0.0 0.067 13.6 0.0 1.4 1 1 0 1 1 1 0 EF-hand domain Methyltransf_32 PF13679.6 gi|15921717|ref|NP_377386.1| - 0.051 13.6 0.0 0.06 13.3 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase domain UPF0020 PF01170.18 gi|15921717|ref|NP_377386.1| - 0.054 13.2 0.4 1.2 8.8 0.4 2.1 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 KRAP_IP3R_bind PF14722.6 gi|15921717|ref|NP_377386.1| - 0.12 12.1 0.0 0.2 11.4 0.0 1.5 1 1 0 1 1 1 0 Ki-ras-induced actin-interacting protein-IP3R-interacting domain Ribonuc_L-PSP PF01042.21 gi|15921718|ref|NP_377387.1| - 0.19 11.7 0.0 0.31 11.0 0.0 1.4 1 0 0 1 1 1 0 Endoribonuclease L-PSP CDP-OH_P_transf PF01066.21 gi|15921719|ref|NP_377388.1| - 6e-11 42.9 2.5 6e-11 42.9 2.5 2.6 2 1 0 2 2 2 1 CDP-alcohol phosphatidyltransferase TctB PF07331.11 gi|15921719|ref|NP_377388.1| - 4.9 7.4 20.0 4.6 7.5 12.6 2.1 1 1 1 2 2 2 0 Tripartite tricarboxylate transporter TctB family DNA_primase_lrg PF04104.14 gi|15921720|ref|NP_377389.1| - 1.2e-11 44.6 8.2 2.3e-06 27.2 0.2 2.8 2 2 2 4 4 4 2 Eukaryotic and archaeal DNA primase, large subunit OGG_N PF07934.12 gi|15921720|ref|NP_377389.1| - 0.18 11.9 2.0 0.39 10.8 2.0 1.6 1 0 0 1 1 1 0 8-oxoguanine DNA glycosylase, N-terminal domain tRNA-synt_1g PF09334.11 gi|15921721|ref|NP_377390.1| - 6.7e-153 509.1 0.1 8.6e-153 508.7 0.1 1.1 1 0 0 1 1 1 1 tRNA synthetases class I (M) tRNA-synt_1 PF00133.22 gi|15921721|ref|NP_377390.1| - 1.2e-10 40.3 0.7 1.8e-05 23.2 0.0 2.8 2 1 1 3 3 3 2 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|15921721|ref|NP_377390.1| - 8.3e-06 25.8 0.3 1.5e-05 25.0 0.3 1.4 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA DZR PF12773.7 gi|15921721|ref|NP_377390.1| - 0.35 10.9 3.0 0.76 9.9 3.0 1.5 1 1 0 1 1 1 0 Double zinc ribbon zf-RING_7 PF02591.15 gi|15921721|ref|NP_377390.1| - 7 6.9 10.3 1.8 8.8 0.3 3.5 3 0 0 3 3 3 0 C4-type zinc ribbon domain V_ATPase_I PF01496.19 gi|15921722|ref|NP_377391.1| - 1.7e-35 122.2 19.5 5.3e-27 94.1 0.1 4.0 3 1 1 4 4 4 3 V-type ATPase 116kDa subunit family AATF-Che1 PF13339.6 gi|15921722|ref|NP_377391.1| - 0.0061 17.2 0.8 1.7 9.4 0.1 2.3 2 0 0 2 2 2 2 Apoptosis antagonizing transcription factor DUF4618 PF15397.6 gi|15921722|ref|NP_377391.1| - 0.11 12.0 3.8 2.3 7.5 0.6 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4618) PhoU PF01895.19 gi|15921722|ref|NP_377391.1| - 0.29 11.6 2.8 0.57 10.7 0.5 2.4 2 0 0 2 2 2 0 PhoU domain ZnuA PF01297.17 gi|15921722|ref|NP_377391.1| - 0.4 10.0 2.8 1.4 8.3 0.4 2.2 1 1 1 2 2 2 0 Zinc-uptake complex component A periplasmic Prefoldin PF02996.17 gi|15921722|ref|NP_377391.1| - 0.79 9.7 5.3 19 5.2 0.1 2.8 2 0 0 2 2 2 0 Prefoldin subunit ZapB PF06005.12 gi|15921722|ref|NP_377391.1| - 1.5 9.3 5.9 0.69 10.4 0.6 2.5 2 0 0 2 2 2 0 Cell division protein ZapB DUF4200 PF13863.6 gi|15921722|ref|NP_377391.1| - 3.2 8.2 9.0 4.1 7.8 0.2 2.7 3 0 0 3 3 3 0 Domain of unknown function (DUF4200) Prefoldin_2 PF01920.20 gi|15921722|ref|NP_377391.1| - 5.4 7.0 8.3 14 5.7 0.3 2.6 2 0 0 2 2 2 0 Prefoldin subunit FlaC_arch PF05377.11 gi|15921722|ref|NP_377391.1| - 6.4 7.3 7.9 5.8 7.4 0.3 3.5 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) DHHA1 PF02272.19 gi|15921722|ref|NP_377391.1| - 7.1 7.0 7.8 1.3 9.5 1.3 2.4 2 0 0 2 2 2 0 DHHA1 domain ATP-synt_F PF01990.17 gi|15921723|ref|NP_377392.1| - 1.1e-15 57.7 0.2 1.3e-15 57.5 0.2 1.0 1 0 0 1 1 1 1 ATP synthase (F/14-kDa) subunit vATP-synt_E PF01991.18 gi|15921724|ref|NP_377393.1| - 4.8e-06 26.1 9.8 9.2e-06 25.2 9.8 1.5 1 1 0 1 1 1 1 ATP synthase (E/31 kDa) subunit RasGEF_N_2 PF14663.6 gi|15921724|ref|NP_377393.1| - 0.007 16.7 1.1 0.023 15.1 0.4 2.1 2 1 1 3 3 3 1 Rapamycin-insensitive companion of mTOR RasGEF_N domain OSCP PF00213.18 gi|15921724|ref|NP_377393.1| - 0.04 14.0 3.6 0.069 13.3 0.2 2.4 2 1 0 2 2 2 0 ATP synthase delta (OSCP) subunit Rsbr_N PF08678.10 gi|15921724|ref|NP_377393.1| - 0.9 9.6 8.0 0.51 10.4 0.8 2.9 2 1 0 3 3 3 0 Rsbr N terminal RNase_H2-Ydr279 PF09468.10 gi|15921724|ref|NP_377393.1| - 1.8 8.7 8.1 1 9.5 5.5 1.8 1 1 1 2 2 2 0 Ydr279p protein family (RNase H2 complex component) wHTH domain CelTOS PF18659.1 gi|15921724|ref|NP_377393.1| - 2 8.9 10.4 1.5 9.2 4.4 3.0 3 1 1 4 4 4 0 Cell-traversal protein for ookinetes and sporozoites ATP-synt_ab PF00006.25 gi|15921725|ref|NP_377394.1| - 2.3e-85 285.6 0.0 3.3e-85 285.1 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_Xtn PF16886.5 gi|15921725|ref|NP_377394.1| - 9.2e-48 161.1 0.0 1.8e-47 160.1 0.0 1.5 1 0 0 1 1 1 1 ATPsynthase alpha/beta subunit N-term extension ATP-synt_ab_N PF02874.23 gi|15921725|ref|NP_377394.1| - 6.1e-14 52.3 0.8 1.4e-13 51.1 0.8 1.7 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain AAA_22 PF13401.6 gi|15921725|ref|NP_377394.1| - 0.015 15.6 0.1 0.043 14.1 0.0 1.9 2 0 0 2 2 2 0 AAA domain Peptidase_M23 PF01551.22 gi|15921725|ref|NP_377394.1| - 0.032 14.5 0.1 6.9 7.0 0.0 2.9 3 0 0 3 3 3 0 Peptidase family M23 ATPase PF06745.13 gi|15921725|ref|NP_377394.1| - 0.086 12.2 0.0 0.14 11.5 0.0 1.4 1 0 0 1 1 1 0 KaiC AAA_6 PF12774.7 gi|15921725|ref|NP_377394.1| - 0.25 10.3 0.1 0.42 9.5 0.1 1.2 1 0 0 1 1 1 0 Hydrolytic ATP binding site of dynein motor region ATP-synt_ab PF00006.25 gi|15921726|ref|NP_377395.1| - 8.4e-65 218.4 0.0 1.1e-64 218.0 0.0 1.2 1 0 0 1 1 1 1 ATP synthase alpha/beta family, nucleotide-binding domain ATP-synt_ab_N PF02874.23 gi|15921726|ref|NP_377395.1| - 1.4e-13 51.1 0.4 3.3e-13 50.0 0.4 1.7 1 0 0 1 1 1 1 ATP synthase alpha/beta family, beta-barrel domain HAS-barrel PF09378.10 gi|15921726|ref|NP_377395.1| - 0.059 13.5 0.2 0.2 11.8 0.2 2.0 1 0 0 1 1 1 0 HAS barrel domain ATP-synt_D PF01813.17 gi|15921727|ref|NP_377396.1| - 6.7e-43 146.8 4.1 7.6e-43 146.6 4.1 1.0 1 0 0 1 1 1 1 ATP synthase subunit D GOLGA2L5 PF15070.6 gi|15921727|ref|NP_377396.1| - 0.039 12.6 0.8 0.066 11.9 0.4 1.5 2 0 0 2 2 2 0 Putative golgin subfamily A member 2-like protein 5 ATP-synt_E_2 PF08112.11 gi|15921728|ref|NP_377397.1| - 1.1e-33 115.3 15.5 1.2e-33 115.2 15.5 1.0 1 0 0 1 1 1 1 ATP synthase epsilon subunit CelTOS PF18659.1 gi|15921728|ref|NP_377397.1| - 0.0069 16.8 1.5 0.0072 16.8 1.5 1.2 1 0 0 1 1 1 1 Cell-traversal protein for ookinetes and sporozoites OrfB_IS605 PF01385.19 gi|15921728|ref|NP_377397.1| - 0.016 15.4 0.8 0.017 15.3 0.8 1.0 1 0 0 1 1 1 0 Probable transposase VASP_tetra PF08776.11 gi|15921728|ref|NP_377397.1| - 0.054 13.1 0.5 0.054 13.1 0.5 2.4 2 0 0 2 2 2 0 VASP tetramerisation domain ATP-synt_C PF00137.21 gi|15921729|ref|NP_377398.1| - 2.3e-13 50.3 20.8 3.2e-13 49.8 20.8 1.2 1 0 0 1 1 1 1 ATP synthase subunit C YjbE PF11106.8 gi|15921729|ref|NP_377398.1| - 0.006 16.8 3.9 0.01 16.1 3.9 1.3 1 0 0 1 1 1 1 Exopolysaccharide production protein YjbE Nitrate_red_gam PF02665.14 gi|15921729|ref|NP_377398.1| - 0.29 10.6 3.4 0.32 10.5 3.3 1.3 1 1 0 1 1 1 0 Nitrate reductase gamma subunit tRNA-synt_2b PF00587.25 gi|15921730|ref|NP_377399.1| - 5.3e-25 88.4 0.0 7.7e-25 87.9 0.0 1.2 1 0 0 1 1 1 1 tRNA synthetase class II core domain (G, H, P, S and T) HGTP_anticodon PF03129.20 gi|15921730|ref|NP_377399.1| - 9.8e-22 76.9 0.7 2.8e-21 75.5 0.4 2.0 2 0 0 2 2 2 1 Anticodon binding domain ProRS-C_1 PF09180.11 gi|15921730|ref|NP_377399.1| - 9.3e-16 57.8 0.0 2.1e-15 56.7 0.0 1.6 1 0 0 1 1 1 1 Prolyl-tRNA synthetase, C-terminal ProRS-C_2 PF09181.10 gi|15921730|ref|NP_377399.1| - 0.012 15.7 1.6 3.1 8.0 1.6 2.8 1 1 1 2 2 2 0 Prolyl-tRNA synthetase, C-terminal tRNA-synt_2 PF00152.20 gi|15921730|ref|NP_377399.1| - 0.027 13.5 1.0 0.16 11.0 0.4 2.2 2 1 0 2 2 2 0 tRNA synthetases class II (D, K and N) RRF PF01765.19 gi|15921730|ref|NP_377399.1| - 0.32 10.9 3.0 0.56 10.1 0.0 2.4 2 0 0 2 2 2 0 Ribosome recycling factor Ribosomal_S26e PF01283.19 gi|161751093|ref|NP_377400.2| - 1.8e-22 79.8 1.8 2.1e-22 79.6 1.8 1.1 1 0 0 1 1 1 1 Ribosomal protein S26e Lar_restr_allev PF14354.6 gi|161751093|ref|NP_377400.2| - 0.0072 16.7 2.6 0.23 11.9 2.6 2.1 1 1 0 1 1 1 1 Restriction alleviation protein Lar Auto_anti-p27 PF06677.12 gi|161751093|ref|NP_377400.2| - 0.033 14.4 6.0 0.16 12.2 0.9 2.3 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DZR PF12773.7 gi|161751093|ref|NP_377400.2| - 0.04 13.9 2.8 0.11 12.6 2.9 1.7 1 1 0 1 1 1 0 Double zinc ribbon zf-ribbon_3 PF13248.6 gi|161751093|ref|NP_377400.2| - 0.056 12.9 0.4 0.056 12.9 0.4 2.2 2 0 0 2 2 2 0 zinc-ribbon domain zf_UBZ PF18439.1 gi|161751093|ref|NP_377400.2| - 0.1 12.2 0.0 0.18 11.5 0.0 1.4 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger SOR_SNZ PF01680.17 gi|15921732|ref|NP_377401.1| - 6.9e-102 339.5 3.8 9.2e-102 339.1 3.8 1.2 1 0 0 1 1 1 1 SOR/SNZ family ThiG PF05690.14 gi|15921732|ref|NP_377401.1| - 4.5e-06 26.1 5.1 4e-05 23.0 0.1 2.4 3 0 0 3 3 3 2 Thiazole biosynthesis protein ThiG Dus PF01207.17 gi|15921732|ref|NP_377401.1| - 0.00049 19.3 1.1 0.19 10.8 0.0 2.9 2 2 1 3 3 3 2 Dihydrouridine synthase (Dus) IGPS PF00218.21 gi|15921732|ref|NP_377401.1| - 0.0013 17.9 0.0 0.43 9.7 0.0 2.3 2 0 0 2 2 2 2 Indole-3-glycerol phosphate synthase OMPdecase PF00215.24 gi|15921732|ref|NP_377401.1| - 0.0014 18.2 0.6 1.2 8.7 0.1 2.9 2 1 1 3 3 3 2 Orotidine 5'-phosphate decarboxylase / HUMPS family NMO PF03060.15 gi|15921732|ref|NP_377401.1| - 0.0031 17.0 1.1 0.016 14.6 0.0 2.2 2 0 0 2 2 2 1 Nitronate monooxygenase TetR_C_27 PF17935.1 gi|15921732|ref|NP_377401.1| - 0.0055 16.7 0.0 0.018 15.1 0.0 1.8 2 0 0 2 2 2 1 Tetracyclin repressor-like, C-terminal domain His_biosynth PF00977.21 gi|15921732|ref|NP_377401.1| - 0.0061 16.0 0.7 0.4 10.1 0.2 3.0 2 1 0 2 2 2 1 Histidine biosynthesis protein NanE PF04131.14 gi|15921732|ref|NP_377401.1| - 0.022 14.0 0.1 0.47 9.6 0.0 2.3 2 0 0 2 2 2 0 Putative N-acetylmannosamine-6-phosphate epimerase SNO PF01174.19 gi|15921733|ref|NP_377402.1| - 2.1e-45 154.9 0.1 2.3e-45 154.7 0.1 1.0 1 0 0 1 1 1 1 SNO glutamine amidotransferase family GATase_3 PF07685.14 gi|15921733|ref|NP_377402.1| - 1.1e-11 44.7 0.2 6.8e-11 42.1 0.1 2.0 1 1 2 3 3 3 1 CobB/CobQ-like glutamine amidotransferase domain GATase PF00117.28 gi|15921733|ref|NP_377402.1| - 7.4e-08 32.4 0.2 7.5e-07 29.1 0.2 2.0 1 1 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_S51 PF03575.17 gi|15921733|ref|NP_377402.1| - 1.2e-07 31.6 0.0 1.6e-07 31.1 0.0 1.2 1 0 0 1 1 1 1 Peptidase family S51 DJ-1_PfpI PF01965.24 gi|15921733|ref|NP_377402.1| - 0.002 18.0 0.1 0.003 17.4 0.1 1.3 1 0 0 1 1 1 1 DJ-1/PfpI family T2SSE PF00437.20 gi|229310097|ref|NP_377403.2| - 6.4e-11 41.8 0.0 1.3e-10 40.8 0.0 1.5 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_16 PF13191.6 gi|229310097|ref|NP_377403.2| - 0.00015 22.2 0.0 0.0037 17.7 0.0 2.4 2 0 0 2 2 2 1 AAA ATPase domain RuvB_N PF05496.12 gi|229310097|ref|NP_377403.2| - 0.00037 20.3 0.5 0.0086 15.8 0.0 2.8 3 0 0 3 3 3 1 Holliday junction DNA helicase RuvB P-loop domain AAA_18 PF13238.6 gi|229310097|ref|NP_377403.2| - 0.00085 19.9 0.0 0.0092 16.5 0.0 2.7 3 1 0 3 3 3 1 AAA domain AAA_22 PF13401.6 gi|229310097|ref|NP_377403.2| - 0.0026 18.0 0.3 0.088 13.1 0.0 2.7 2 1 1 3 3 3 1 AAA domain AAA PF00004.29 gi|229310097|ref|NP_377403.2| - 0.0056 17.1 0.1 0.021 15.3 0.0 2.1 2 0 0 2 2 1 1 ATPase family associated with various cellular activities (AAA) DnaB_C PF03796.15 gi|229310097|ref|NP_377403.2| - 0.0058 16.0 0.0 0.027 13.8 0.0 2.0 2 0 0 2 2 2 1 DnaB-like helicase C terminal domain TsaE PF02367.17 gi|229310097|ref|NP_377403.2| - 0.0082 16.1 0.0 0.019 15.0 0.0 1.6 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE IstB_IS21 PF01695.17 gi|229310097|ref|NP_377403.2| - 0.011 15.4 0.0 0.021 14.5 0.0 1.4 1 0 0 1 1 1 0 IstB-like ATP binding protein AAA_5 PF07728.14 gi|229310097|ref|NP_377403.2| - 0.013 15.5 0.0 0.035 14.1 0.0 1.7 1 0 0 1 1 1 0 AAA domain (dynein-related subfamily) NTPase_1 PF03266.15 gi|229310097|ref|NP_377403.2| - 0.017 15.0 0.2 0.15 11.9 0.0 2.6 2 0 0 2 2 2 0 NTPase NACHT PF05729.12 gi|229310097|ref|NP_377403.2| - 0.026 14.4 0.0 0.053 13.4 0.0 1.5 1 0 0 1 1 1 0 NACHT domain MeaB PF03308.16 gi|229310097|ref|NP_377403.2| - 0.035 13.1 0.0 0.06 12.3 0.0 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Zeta_toxin PF06414.12 gi|229310097|ref|NP_377403.2| - 0.044 13.1 0.0 0.086 12.1 0.0 1.4 1 0 0 1 1 1 0 Zeta toxin ABC_tran PF00005.27 gi|229310097|ref|NP_377403.2| - 0.05 14.1 0.0 0.11 13.0 0.0 1.6 1 0 0 1 1 1 0 ABC transporter AAA_33 PF13671.6 gi|229310097|ref|NP_377403.2| - 0.055 13.6 0.0 0.16 12.2 0.0 1.7 2 0 0 2 2 1 0 AAA domain Sigma54_activ_2 PF14532.6 gi|229310097|ref|NP_377403.2| - 0.057 13.5 0.0 0.14 12.3 0.0 1.7 1 0 0 1 1 1 0 Sigma-54 interaction domain ATP_bind_1 PF03029.17 gi|229310097|ref|NP_377403.2| - 0.065 13.0 0.1 0.13 12.0 0.1 1.5 1 0 0 1 1 1 0 Conserved hypothetical ATP binding protein AAA_24 PF13479.6 gi|229310097|ref|NP_377403.2| - 0.066 12.9 0.0 0.16 11.7 0.0 1.6 1 0 0 1 1 1 0 AAA domain SRP54 PF00448.22 gi|229310097|ref|NP_377403.2| - 0.068 12.8 0.1 0.13 11.9 0.1 1.4 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain AAA_28 PF13521.6 gi|229310097|ref|NP_377403.2| - 0.07 13.4 0.0 0.16 12.2 0.0 1.6 1 0 0 1 1 1 0 AAA domain PrpR_N PF06506.11 gi|229310097|ref|NP_377403.2| - 0.082 12.5 0.0 0.19 11.3 0.0 1.6 1 0 0 1 1 1 0 Propionate catabolism activator Sigma54_activat PF00158.26 gi|229310097|ref|NP_377403.2| - 0.085 12.6 0.0 0.19 11.4 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_19 PF13245.6 gi|229310097|ref|NP_377403.2| - 0.086 13.2 0.0 0.23 11.8 0.0 1.7 1 0 0 1 1 1 0 AAA domain AAA_3 PF07726.11 gi|229310097|ref|NP_377403.2| - 0.099 12.5 0.0 0.62 9.9 0.0 2.2 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) FtsK_SpoIIIE PF01580.18 gi|229310097|ref|NP_377403.2| - 0.12 11.7 0.0 0.21 10.9 0.0 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family Mur_ligase_M PF08245.12 gi|229310097|ref|NP_377403.2| - 0.12 12.3 0.0 0.25 11.3 0.0 1.5 1 0 0 1 1 1 0 Mur ligase middle domain AAA_25 PF13481.6 gi|229310097|ref|NP_377403.2| - 0.15 11.7 0.0 0.39 10.3 0.0 1.6 2 0 0 2 2 2 0 AAA domain AAA_30 PF13604.6 gi|229310097|ref|NP_377403.2| - 0.21 11.3 0.0 0.42 10.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain Hjc PF01870.18 gi|15921735|ref|NP_377404.1| - 3e-28 97.7 0.2 4.2e-28 97.2 0.2 1.2 1 0 0 1 1 1 1 Archaeal holliday junction resolvase (hjc) AHJR-like PF18743.1 gi|15921735|ref|NP_377404.1| - 1.5e-05 24.5 0.0 4.4e-05 23.0 0.0 1.7 1 1 1 2 2 2 1 REase_AHJR-like UPF0102 PF02021.17 gi|15921735|ref|NP_377404.1| - 0.006 16.8 0.0 0.0091 16.2 0.0 1.5 1 0 0 1 1 1 1 Uncharacterised protein family UPF0102 DUF3883 PF13020.6 gi|15921735|ref|NP_377404.1| - 0.054 13.5 0.2 0.11 12.6 0.1 1.6 2 0 0 2 2 2 0 Domain of unknown function (DUF3883) NERD PF08378.11 gi|15921735|ref|NP_377404.1| - 0.11 12.9 0.0 0.13 12.7 0.0 1.3 1 0 0 1 1 1 0 Nuclease-related domain IlvN PF07991.12 gi|15921736|ref|NP_377405.1| - 1.3e-72 242.8 0.0 2.2e-72 242.0 0.0 1.4 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, NADPH-binding domain IlvC PF01450.19 gi|15921736|ref|NP_377405.1| - 1.2e-54 184.6 3.1 1.7e-54 184.0 3.1 1.2 1 0 0 1 1 1 1 Acetohydroxy acid isomeroreductase, catalytic domain F420_oxidored PF03807.17 gi|15921736|ref|NP_377405.1| - 5.8e-07 30.0 0.0 1.6e-06 28.6 0.0 1.7 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 gi|15921736|ref|NP_377405.1| - 4.9e-06 26.0 0.0 1e-05 25.0 0.0 1.5 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_binding_2 PF03446.15 gi|15921736|ref|NP_377405.1| - 0.00019 21.6 0.0 0.00042 20.5 0.0 1.6 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase AdoHcyase_NAD PF00670.21 gi|15921736|ref|NP_377405.1| - 0.00088 19.4 0.0 0.0021 18.1 0.0 1.6 1 0 0 1 1 1 1 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|15921736|ref|NP_377405.1| - 0.019 15.0 0.2 5.2 7.0 0.1 2.6 1 1 1 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ApbA PF02558.16 gi|15921736|ref|NP_377405.1| - 0.045 13.4 0.1 0.14 11.8 0.1 1.9 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA ACT_5 PF13710.6 gi|15921737|ref|NP_377406.1| - 1.1e-06 28.4 0.0 1.7e-06 27.8 0.0 1.3 1 0 0 1 1 1 1 ACT domain TPP_enzyme_N PF02776.18 gi|15921738|ref|NP_377407.1| - 8.4e-58 194.8 0.0 1e-55 188.0 0.0 2.3 2 0 0 2 2 2 2 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|15921738|ref|NP_377407.1| - 4.3e-47 159.7 0.1 4.5e-46 156.4 0.0 2.5 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|15921738|ref|NP_377407.1| - 5.8e-40 136.2 0.0 1.3e-39 135.1 0.0 1.6 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, central domain POR_N PF01855.19 gi|15921738|ref|NP_377407.1| - 0.0014 18.4 0.0 0.003 17.3 0.0 1.6 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CO_dh PF02552.16 gi|15921738|ref|NP_377407.1| - 0.088 12.6 0.2 0.3 10.9 0.0 1.9 1 1 1 2 2 2 0 CO dehydrogenase beta subunit/acetyl-CoA synthase epsilon subunit PNTB PF02233.16 gi|15921738|ref|NP_377407.1| - 0.15 10.9 0.0 0.27 10.1 0.0 1.3 1 0 0 1 1 1 0 NAD(P) transhydrogenase beta subunit Acid_PPase PF12689.7 gi|15921739|ref|NP_377408.1| - 2.5e-11 43.7 0.1 3.5e-11 43.3 0.1 1.3 1 1 0 1 1 1 1 Acid Phosphatase HAD_2 PF13419.6 gi|15921739|ref|NP_377408.1| - 2.8e-09 37.3 0.4 4.6e-08 33.4 0.0 2.1 1 1 1 2 2 2 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|15921739|ref|NP_377408.1| - 2.6e-06 27.9 0.0 0.00086 19.6 0.0 2.2 1 1 0 2 2 2 2 haloacid dehalogenase-like hydrolase DUF3368 PF11848.8 gi|15921739|ref|NP_377408.1| - 0.015 15.0 0.1 0.11 12.3 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF3368) PGP_phosphatase PF09419.10 gi|15921739|ref|NP_377408.1| - 0.14 11.7 0.0 13 5.3 0.0 2.2 2 0 0 2 2 2 0 Mitochondrial PGP phosphatase MMR_HSR1 PF01926.23 gi|15921740|ref|NP_377409.1| - 2.8e-15 56.4 0.4 1.3e-11 44.6 0.0 2.2 2 0 0 2 2 2 2 50S ribosome-binding GTPase RsgA_GTPase PF03193.16 gi|15921740|ref|NP_377409.1| - 2e-12 47.3 0.0 3.1e-12 46.7 0.0 1.3 1 0 0 1 1 1 1 RsgA GTPase FeoB_N PF02421.18 gi|15921740|ref|NP_377409.1| - 2.1e-06 27.3 0.3 0.026 14.0 0.0 2.2 2 0 0 2 2 2 2 Ferrous iron transport protein B Dynamin_N PF00350.23 gi|15921740|ref|NP_377409.1| - 0.00018 21.6 1.1 0.03 14.4 0.1 2.3 2 1 0 2 2 2 1 Dynamin family GTP_EFTU PF00009.27 gi|15921740|ref|NP_377409.1| - 0.00084 18.9 0.0 0.0014 18.2 0.0 1.5 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain Roc PF08477.13 gi|15921740|ref|NP_377409.1| - 0.0012 19.1 0.1 0.099 12.9 0.0 2.3 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase MMR_HSR1_Xtn PF16897.5 gi|15921740|ref|NP_377409.1| - 0.0021 18.0 0.1 0.0073 16.3 0.0 1.9 1 1 0 2 2 2 1 C-terminal region of MMR_HSR1 domain Arf PF00025.21 gi|15921740|ref|NP_377409.1| - 0.0038 16.7 0.4 0.15 11.5 0.0 2.2 2 0 0 2 2 2 1 ADP-ribosylation factor family AAA_16 PF13191.6 gi|15921740|ref|NP_377409.1| - 0.013 15.8 0.0 0.032 14.6 0.0 1.6 2 0 0 2 2 2 0 AAA ATPase domain cobW PF02492.19 gi|15921740|ref|NP_377409.1| - 0.018 14.6 0.2 0.14 11.7 0.0 2.0 2 0 0 2 2 2 0 CobW/HypB/UreG, nucleotide-binding domain PduV-EutP PF10662.9 gi|15921740|ref|NP_377409.1| - 0.058 13.1 0.8 8.1 6.2 0.0 2.5 3 0 0 3 3 3 0 Ethanolamine utilisation - propanediol utilisation Beta-Casp PF10996.8 gi|15921740|ref|NP_377409.1| - 0.06 13.6 0.0 0.11 12.8 0.0 1.6 1 0 0 1 1 1 0 Beta-Casp domain 6PF2K PF01591.18 gi|15921740|ref|NP_377409.1| - 0.3 10.4 1.8 9.2 5.5 0.1 3.1 2 1 2 4 4 4 0 6-phosphofructo-2-kinase UbiA PF01040.18 gi|15921742|ref|NP_377411.1| - 4.5e-42 144.1 19.6 5.6e-42 143.8 19.6 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family AdoMet_dc PF02675.15 gi|15921745|ref|NP_377414.1| - 6.5e-35 119.6 0.1 7.3e-35 119.4 0.1 1.0 1 0 0 1 1 1 1 S-adenosylmethionine decarboxylase YcaO PF02624.16 gi|15921745|ref|NP_377414.1| - 0.026 13.8 0.0 0.029 13.6 0.0 1.0 1 0 0 1 1 1 0 YcaO cyclodehydratase, ATP-ad Mg2+-binding GGACT PF06094.12 gi|15921745|ref|NP_377414.1| - 0.096 13.3 1.2 1 10.0 1.2 2.0 1 1 0 1 1 1 0 Gamma-glutamyl cyclotransferase, AIG2-like DUF211 PF02680.14 gi|15921746|ref|NP_377415.1| - 7.1e-37 125.5 2.2 7.9e-37 125.3 2.2 1.0 1 0 0 1 1 1 1 Uncharacterized ArCR, COG1888 ATP_bind_3 PF01171.20 gi|15921747|ref|NP_377416.1| - 3.7e-10 39.9 0.0 5.9e-10 39.2 0.0 1.4 1 0 0 1 1 1 1 PP-loop family NAD_synthase PF02540.17 gi|15921747|ref|NP_377416.1| - 0.0038 16.4 0.0 0.005 16.0 0.0 1.2 1 0 0 1 1 1 1 NAD synthase tRNA_Me_trans PF03054.16 gi|15921747|ref|NP_377416.1| - 0.0065 15.3 0.0 0.009 14.8 0.0 1.1 1 0 0 1 1 1 1 tRNA methyl transferase SF3b10 PF07189.11 gi|15921747|ref|NP_377416.1| - 0.058 13.5 0.0 0.14 12.3 0.0 1.7 1 0 0 1 1 1 0 Splicing factor 3B subunit 10 (SF3b10) Ribosomal_S14 PF00253.21 gi|15921747|ref|NP_377416.1| - 0.21 11.4 5.5 3.6 7.4 0.9 2.8 2 0 0 2 2 2 0 Ribosomal protein S14p/S29e zf-ribbon_3 PF13248.6 gi|15921747|ref|NP_377416.1| - 2.7 7.5 10.8 0.35 10.3 1.3 3.2 3 0 0 3 3 3 0 zinc-ribbon domain Cob_adeno_trans PF01923.18 gi|15921748|ref|NP_377417.1| - 1.3e-47 162.0 0.0 1.4e-47 161.8 0.0 1.0 1 0 0 1 1 1 1 Cobalamin adenosyltransferase DUF5357 PF17310.2 gi|15921748|ref|NP_377417.1| - 0.085 11.4 0.1 0.098 11.2 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5357) tRNA-synt_1 PF00133.22 gi|15921749|ref|NP_377418.1| - 3.5e-54 184.1 0.0 2.1e-53 181.5 0.0 2.1 1 1 0 1 1 1 1 tRNA synthetases class I (I, L, M and V) Anticodon_1 PF08264.13 gi|15921749|ref|NP_377418.1| - 7e-21 74.8 1.1 1.7e-20 73.6 1.1 1.7 1 0 0 1 1 1 1 Anticodon-binding domain of tRNA tRNA-synt_1g PF09334.11 gi|15921749|ref|NP_377418.1| - 3.6e-17 62.2 0.7 1.6e-10 40.3 0.0 3.4 3 2 1 4 4 4 2 tRNA synthetases class I (M) tRNA-synt_1_2 PF13603.6 gi|15921749|ref|NP_377418.1| - 1.7e-12 47.2 0.1 4.1e-12 46.0 0.1 1.6 1 0 0 1 1 1 1 Leucyl-tRNA synthetase, Domain 2 tRNA-synt_1e PF01406.19 gi|15921749|ref|NP_377418.1| - 2.5e-11 43.5 0.0 2.7e-09 36.8 0.0 2.4 2 0 0 2 2 2 2 tRNA synthetases class I (C) catalytic domain tRNA-synt_1f PF01921.18 gi|15921749|ref|NP_377418.1| - 0.03 13.3 0.0 0.077 11.9 0.0 1.7 1 0 0 1 1 1 0 tRNA synthetases class I (K) SBDS_C PF09377.10 gi|15921749|ref|NP_377418.1| - 0.087 12.8 0.3 8.5 6.4 0.0 3.2 2 1 0 2 2 2 0 SBDS protein C-terminal domain IQ_SEC7_PH PF16453.5 gi|15921750|ref|NP_377419.1| - 0.068 13.1 1.0 0.074 13.0 0.2 1.6 2 0 0 2 2 2 0 PH domain Aminotran_1_2 PF00155.21 gi|15921751|ref|NP_377420.1| - 2.1e-42 145.6 0.0 2.3e-42 145.5 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Zot PF05707.12 gi|15921751|ref|NP_377420.1| - 0.019 14.6 0.0 0.075 12.7 0.0 2.1 1 1 0 1 1 1 0 Zonular occludens toxin (Zot) Cys_Met_Meta_PP PF01053.20 gi|15921751|ref|NP_377420.1| - 0.035 12.6 0.0 0.052 12.1 0.0 1.2 1 0 0 1 1 1 0 Cys/Met metabolism PLP-dependent enzyme DUF2935 PF11155.8 gi|15921751|ref|NP_377420.1| - 0.037 14.4 0.0 0.12 12.7 0.0 1.9 1 1 0 1 1 1 0 Domain of unknown function (DUF2935) HisG PF01634.18 gi|15921752|ref|NP_377421.1| - 1.5e-49 168.0 0.6 2e-49 167.6 0.6 1.1 1 0 0 1 1 1 1 ATP phosphoribosyltransferase HisG_C PF08029.11 gi|15921752|ref|NP_377421.1| - 1.8e-21 76.0 1.9 2.7e-21 75.5 0.7 2.0 2 0 0 2 2 2 1 HisG, C-terminal domain NIR_SIR_ferr PF03460.17 gi|15921752|ref|NP_377421.1| - 0.11 12.4 0.1 30 4.6 0.0 3.1 3 0 0 3 3 3 0 Nitrite/Sulfite reductase ferredoxin-like half domain His_biosynth PF00977.21 gi|15921753|ref|NP_377422.1| - 1.4e-49 168.7 0.4 1.5e-49 168.5 0.4 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein PcrB PF01884.17 gi|15921753|ref|NP_377422.1| - 0.00033 20.2 2.2 0.029 13.8 0.1 2.3 2 0 0 2 2 2 2 PcrB family MIT PF04212.18 gi|15921753|ref|NP_377422.1| - 0.047 13.8 0.0 6.6 6.9 0.0 2.3 2 0 0 2 2 2 0 MIT (microtubule interacting and transport) domain IGPD PF00475.18 gi|15921754|ref|NP_377423.1| - 3.7e-48 163.5 0.3 4.7e-48 163.2 0.3 1.1 1 0 0 1 1 1 1 Imidazoleglycerol-phosphate dehydratase 4HPAD_g_N PF18671.1 gi|15921754|ref|NP_377423.1| - 0.11 12.2 0.0 0.22 11.3 0.0 1.5 1 0 0 1 1 1 0 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal His_biosynth PF00977.21 gi|15921755|ref|NP_377424.1| - 1.1e-84 283.4 6.7 1.3e-84 283.3 6.7 1.0 1 0 0 1 1 1 1 Histidine biosynthesis protein NMO PF03060.15 gi|15921755|ref|NP_377424.1| - 4.4e-09 36.2 2.9 0.00083 18.8 0.3 2.1 1 1 1 2 2 2 2 Nitronate monooxygenase Dus PF01207.17 gi|15921755|ref|NP_377424.1| - 1.1e-06 28.0 0.6 0.013 14.6 0.1 2.1 1 1 1 2 2 2 2 Dihydrouridine synthase (Dus) TMP-TENI PF02581.17 gi|15921755|ref|NP_377424.1| - 4.3e-06 26.2 0.3 0.075 12.4 0.1 2.2 2 0 0 2 2 2 2 Thiamine monophosphate synthase G3P_antiterm PF04309.12 gi|15921755|ref|NP_377424.1| - 0.00018 20.9 1.0 0.012 15.1 0.3 2.3 2 0 0 2 2 2 1 Glycerol-3-phosphate responsive antiterminator ThiG PF05690.14 gi|15921755|ref|NP_377424.1| - 0.0002 20.7 1.2 0.0065 15.8 0.3 2.2 1 1 0 2 2 2 1 Thiazole biosynthesis protein ThiG PcrB PF01884.17 gi|15921755|ref|NP_377424.1| - 0.00084 18.9 2.8 0.024 14.1 0.4 2.2 2 0 0 2 2 2 1 PcrB family FMN_dh PF01070.18 gi|15921755|ref|NP_377424.1| - 0.011 14.7 1.1 0.085 11.9 0.2 2.4 2 1 1 3 3 3 0 FMN-dependent dehydrogenase IMPDH PF00478.25 gi|15921755|ref|NP_377424.1| - 0.016 14.2 1.3 0.75 8.7 0.1 2.2 1 1 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain DHO_dh PF01180.21 gi|15921755|ref|NP_377424.1| - 0.021 14.1 1.0 0.34 10.1 0.1 2.3 2 1 0 2 2 2 0 Dihydroorotate dehydrogenase Trp_syntA PF00290.20 gi|15921755|ref|NP_377424.1| - 0.022 13.6 2.6 0.13 11.1 0.7 2.1 2 0 0 2 2 2 0 Tryptophan synthase alpha chain DUF2625 PF10946.8 gi|15921755|ref|NP_377424.1| - 0.046 12.8 0.3 0.16 11.1 0.1 1.8 1 1 1 2 2 2 0 Protein of unknown function DUF2625 Histidinol_dh PF00815.20 gi|15921756|ref|NP_377425.1| - 3.8e-127 424.7 1.7 2.3e-126 422.1 1.7 1.8 1 1 0 1 1 1 1 Histidinol dehydrogenase IFP_35_N PF07334.13 gi|15921756|ref|NP_377425.1| - 0.12 12.5 0.1 0.32 11.1 0.1 1.7 1 0 0 1 1 1 0 Interferon-induced 35 kDa protein (IFP 35) N-terminus PRA-PH PF01503.17 gi|15921757|ref|NP_377426.1| - 4.2e-16 59.1 0.1 5.3e-16 58.8 0.1 1.1 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase MazG PF03819.17 gi|15921757|ref|NP_377426.1| - 0.004 17.3 0.1 0.0057 16.8 0.1 1.2 1 0 0 1 1 1 1 MazG nucleotide pyrophosphohydrolase domain GATase PF00117.28 gi|15921758|ref|NP_377427.1| - 2.3e-19 69.9 0.0 2.7e-19 69.7 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferase class-I GATase_3 PF07685.14 gi|15921758|ref|NP_377427.1| - 0.0025 17.4 0.0 0.0031 17.1 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain GATase_5 PF13507.6 gi|15921758|ref|NP_377427.1| - 0.032 13.3 0.0 0.044 12.9 0.0 1.2 1 0 0 1 1 1 0 CobB/CobQ-like glutamine amidotransferase domain Peptidase_C26 PF07722.13 gi|15921758|ref|NP_377427.1| - 0.085 12.6 0.1 10 5.8 0.0 2.1 2 0 0 2 2 2 0 Peptidase C26 PRA-CH PF01502.18 gi|15921759|ref|NP_377428.1| - 4.7e-32 109.6 0.2 7.2e-32 109.0 0.2 1.3 1 0 0 1 1 1 1 Phosphoribosyl-AMP cyclohydrolase W_rich_C PF07483.11 gi|15921759|ref|NP_377428.1| - 0.019 15.1 0.0 0.024 14.8 0.0 1.2 1 0 0 1 1 1 0 Tryptophan-rich Synechocystis species C-terminal domain LpxI_N PF17930.1 gi|15921759|ref|NP_377428.1| - 0.045 13.6 0.0 0.05 13.5 0.0 1.2 1 0 0 1 1 1 0 LpxI N-terminal domain FeS_assembly_P PF01883.19 gi|15921760|ref|NP_377429.1| - 1.3e-20 73.4 0.4 2.8e-20 72.2 0.4 1.5 1 1 1 2 2 2 1 Iron-sulfur cluster assembly protein NifU PF01106.17 gi|15921760|ref|NP_377429.1| - 0.015 15.4 0.0 0.02 15.0 0.0 1.3 1 0 0 1 1 1 0 NifU-like domain YqhG PF11079.8 gi|15921760|ref|NP_377429.1| - 0.027 13.4 0.1 0.049 12.6 0.1 1.4 1 0 0 1 1 1 0 Bacterial protein YqhG of unknown function tRNA-synt_2b PF00587.25 gi|15921761|ref|NP_377430.1| - 1.2e-40 139.4 0.0 2.7e-40 138.2 0.0 1.5 2 0 0 2 2 2 1 tRNA synthetase class II core domain (G, H, P, S and T) Seryl_tRNA_N PF02403.22 gi|15921761|ref|NP_377430.1| - 1.1e-23 83.5 10.6 2.1e-23 82.6 10.6 1.5 1 0 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain APG6_N PF17675.1 gi|15921761|ref|NP_377430.1| - 0.0031 18.0 2.1 0.0064 17.0 2.1 1.6 1 0 0 1 1 1 1 Apg6 coiled-coil region ALIX_LYPXL_bnd PF13949.6 gi|15921761|ref|NP_377430.1| - 0.063 12.6 3.2 0.11 11.8 3.2 1.3 1 0 0 1 1 1 0 ALIX V-shaped domain binding to HIV YkyA PF10368.9 gi|15921761|ref|NP_377430.1| - 0.066 12.9 5.9 0.13 11.9 5.9 1.4 1 0 0 1 1 1 0 Putative cell-wall binding lipoprotein Cep57_MT_bd PF06657.13 gi|15921761|ref|NP_377430.1| - 0.21 12.1 5.0 0.48 10.9 5.0 1.6 1 0 0 1 1 1 0 Centrosome microtubule-binding domain of Cep57 OmpH PF03938.14 gi|15921761|ref|NP_377430.1| - 0.37 11.1 4.1 0.48 10.8 2.1 2.1 2 0 0 2 2 2 0 Outer membrane protein (OmpH-like) FapA PF03961.13 gi|15921761|ref|NP_377430.1| - 0.54 8.8 4.7 1.1 7.8 4.7 1.4 1 0 0 1 1 1 0 Flagellar Assembly Protein A DUF2205 PF10224.9 gi|15921761|ref|NP_377430.1| - 7.1 6.7 10.6 1.4 9.0 3.8 2.5 1 1 1 2 2 2 0 Short coiled-coil protein Radical_SAM PF04055.21 gi|15921762|ref|NP_377431.1| - 3.4e-16 60.1 0.1 6.5e-16 59.2 0.1 1.5 1 0 0 1 1 1 1 Radical SAM superfamily B12-binding PF02310.19 gi|15921762|ref|NP_377431.1| - 0.00067 19.7 0.0 0.02 15.0 0.0 2.3 2 0 0 2 2 2 1 B12 binding domain HIT PF01230.23 gi|15921763|ref|NP_377432.1| - 8.7e-31 106.6 1.0 1.2e-30 106.1 1.0 1.2 1 0 0 1 1 1 1 HIT domain DcpS_C PF11969.8 gi|15921763|ref|NP_377432.1| - 3.1e-19 69.6 0.9 4e-19 69.2 0.9 1.2 1 0 0 1 1 1 1 Scavenger mRNA decapping enzyme C-term binding CwfJ_C_1 PF04677.15 gi|15921763|ref|NP_377432.1| - 0.00033 20.5 1.8 0.00048 20.0 1.6 1.5 1 1 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 RNA_POL_M_15KD PF02150.16 gi|15921764|ref|NP_377433.1| - 3.4e-10 39.6 0.8 6.1e-10 38.8 0.8 1.5 1 0 0 1 1 1 1 RNA polymerases M/15 Kd subunit zf-TFIIB PF13453.6 gi|15921764|ref|NP_377433.1| - 0.00035 19.8 1.5 0.00061 19.1 1.5 1.4 1 0 0 1 1 1 1 Transcription factor zinc-finger zinc_ribbon_2 PF13240.6 gi|15921764|ref|NP_377433.1| - 0.00059 19.5 5.0 0.41 10.4 0.1 2.4 2 0 0 2 2 2 2 zinc-ribbon domain zf-NADH-PPase PF09297.11 gi|15921764|ref|NP_377433.1| - 0.0014 18.2 2.6 0.015 14.9 2.6 2.2 1 1 0 1 1 1 1 NADH pyrophosphatase zinc ribbon domain IBR PF01485.21 gi|15921764|ref|NP_377433.1| - 0.0016 18.7 1.5 0.0031 17.7 1.3 1.6 1 1 0 1 1 1 1 IBR domain, a half RING-finger domain DZR PF12773.7 gi|15921764|ref|NP_377433.1| - 0.0017 18.3 0.5 0.0026 17.7 0.5 1.3 1 0 0 1 1 1 1 Double zinc ribbon Nudix_N_2 PF14803.6 gi|15921764|ref|NP_377433.1| - 0.0028 17.5 3.1 0.014 15.2 3.3 2.0 1 1 1 2 2 2 1 Nudix N-terminal DUF2387 PF09526.10 gi|15921764|ref|NP_377433.1| - 0.013 15.7 2.5 0.023 14.8 2.5 1.7 1 1 0 1 1 1 0 Probable metal-binding protein (DUF2387) TF_Zn_Ribbon PF08271.12 gi|15921764|ref|NP_377433.1| - 0.019 14.5 1.9 0.019 14.5 1.9 1.9 2 1 0 2 2 2 0 TFIIB zinc-binding Lar_restr_allev PF14354.6 gi|15921764|ref|NP_377433.1| - 0.023 15.1 0.9 0.023 15.1 0.9 1.7 2 0 0 2 2 1 0 Restriction alleviation protein Lar Zn-ribbon_8 PF09723.10 gi|15921764|ref|NP_377433.1| - 0.025 14.7 1.3 2.5 8.3 0.1 2.3 2 0 0 2 2 2 0 Zinc ribbon domain zf-ribbon_3 PF13248.6 gi|15921764|ref|NP_377433.1| - 0.035 13.5 4.3 0.27 10.7 0.5 2.3 2 0 0 2 2 2 0 zinc-ribbon domain zf-C3HC PF07967.13 gi|15921764|ref|NP_377433.1| - 0.035 14.1 1.5 0.047 13.7 1.5 1.4 1 1 0 1 1 1 0 C3HC zinc finger-like A2L_zn_ribbon PF08792.10 gi|15921764|ref|NP_377433.1| - 0.042 13.6 2.9 1.1 9.1 0.1 2.3 1 1 0 2 2 2 0 A2L zinc ribbon domain OrfB_Zn_ribbon PF07282.11 gi|15921764|ref|NP_377433.1| - 0.043 13.7 0.6 0.043 13.7 0.6 1.6 2 0 0 2 2 1 0 Putative transposase DNA-binding domain Zn_ribbon_recom PF13408.6 gi|15921764|ref|NP_377433.1| - 0.05 14.1 5.4 1.8 9.1 5.4 2.3 1 1 0 1 1 1 0 Recombinase zinc beta ribbon domain YhfH PF14149.6 gi|15921764|ref|NP_377433.1| - 0.079 13.0 4.6 5 7.2 0.2 2.7 2 0 0 2 2 2 0 YhfH-like protein Zn_Tnp_IS1595 PF12760.7 gi|15921764|ref|NP_377433.1| - 0.097 12.7 0.7 0.2 11.7 0.7 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain C1_1 PF00130.22 gi|15921764|ref|NP_377433.1| - 0.1 12.5 0.9 0.15 11.9 0.9 1.2 1 0 0 1 1 1 0 Phorbol esters/diacylglycerol binding domain (C1 domain) zf_UBZ PF18439.1 gi|15921764|ref|NP_377433.1| - 0.14 11.7 1.1 7 6.3 0.1 2.5 2 0 0 2 2 2 0 Ubiquitin-Binding Zinc Finger Auto_anti-p27 PF06677.12 gi|15921764|ref|NP_377433.1| - 0.25 11.5 3.0 0.52 10.5 3.0 1.5 1 0 0 1 1 1 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) DNA_RNApol_7kD PF03604.13 gi|15921764|ref|NP_377433.1| - 0.27 10.9 3.4 0.95 9.2 3.4 1.9 1 1 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit UPF0547 PF10571.9 gi|15921764|ref|NP_377433.1| - 0.27 11.3 3.0 5 7.3 0.7 2.2 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 zf-C4_Topoisom PF01396.19 gi|15921764|ref|NP_377433.1| - 0.42 10.4 4.0 1.7 8.5 0.5 2.2 1 1 1 2 2 2 0 Topoisomerase DNA binding C4 zinc finger Ribosomal_L33 PF00471.20 gi|15921764|ref|NP_377433.1| - 0.75 10.3 5.5 10 6.7 1.1 2.5 2 0 0 2 2 2 0 Ribosomal protein L33 zinc_ribbon_4 PF13717.6 gi|15921764|ref|NP_377433.1| - 2.9 7.9 6.3 3.9 7.5 0.1 2.9 4 0 0 4 4 4 0 zinc-ribbon domain zinc_ribbon_15 PF17032.5 gi|15921764|ref|NP_377433.1| - 4.5 8.1 7.8 3.5 8.5 1.2 2.3 2 1 0 2 2 2 0 zinc-ribbon family zf-IS66 PF13005.7 gi|15921764|ref|NP_377433.1| - 5.8 7.4 7.1 3.4 8.1 0.2 2.7 2 1 1 3 3 2 0 zinc-finger binding domain of transposase IS66 NOB1_Zn_bind PF08772.11 gi|15921764|ref|NP_377433.1| - 7.7 6.8 7.2 2.7e+02 1.8 7.2 2.5 1 1 0 1 1 1 0 Nin one binding (NOB1) Zn-ribbon like AsnC_trans_reg PF01037.21 gi|15921765|ref|NP_377434.1| - 9.6e-18 63.9 0.2 1.5e-17 63.3 0.2 1.3 1 0 0 1 1 1 1 Lrp/AsnC ligand binding domain HTH_24 PF13412.6 gi|15921765|ref|NP_377434.1| - 4.6e-11 42.1 0.1 8.2e-10 38.1 0.2 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|15921765|ref|NP_377434.1| - 2e-09 37.1 1.5 6.8e-09 35.4 1.8 1.7 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_11 PF08279.12 gi|15921765|ref|NP_377434.1| - 5.5e-05 23.0 0.1 9.7e-05 22.2 0.1 1.4 1 0 0 1 1 1 1 HTH domain Fe_dep_repress PF01325.19 gi|15921765|ref|NP_377434.1| - 0.0011 19.1 0.1 0.003 17.7 0.1 1.7 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_10 PF04967.12 gi|15921765|ref|NP_377434.1| - 0.0014 18.4 0.0 0.0028 17.4 0.0 1.5 1 0 0 1 1 1 1 HTH DNA binding domain MarR_2 PF12802.7 gi|15921765|ref|NP_377434.1| - 0.0015 18.4 0.2 0.0032 17.3 0.2 1.5 1 0 0 1 1 1 1 MarR family HTH_8 PF02954.19 gi|15921765|ref|NP_377434.1| - 0.0017 18.1 0.2 0.0032 17.2 0.2 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, Fis family HTH_23 PF13384.6 gi|15921765|ref|NP_377434.1| - 0.0047 16.7 0.0 0.009 15.8 0.0 1.5 1 0 0 1 1 1 1 Homeodomain-like domain HTH_DeoR PF08220.12 gi|15921765|ref|NP_377434.1| - 0.0053 16.5 0.2 0.017 14.8 0.1 1.9 2 0 0 2 2 2 1 DeoR-like helix-turn-helix domain HTH_Tnp_ISL3 PF13542.6 gi|15921765|ref|NP_377434.1| - 0.0068 15.8 0.0 0.01 15.2 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_IclR PF09339.10 gi|15921765|ref|NP_377434.1| - 0.0075 16.0 0.6 0.011 15.5 0.6 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain GntR PF00392.21 gi|15921765|ref|NP_377434.1| - 0.0087 15.7 0.4 0.015 14.9 0.4 1.3 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family Rrf2 PF02082.20 gi|15921765|ref|NP_377434.1| - 0.012 16.0 0.0 0.025 14.9 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator HTH_50 PF18024.1 gi|15921765|ref|NP_377434.1| - 0.019 14.6 0.3 0.1 12.2 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain MarR PF01047.22 gi|15921765|ref|NP_377434.1| - 0.025 14.5 0.1 0.059 13.3 0.1 1.6 1 0 0 1 1 1 0 MarR family TrmB PF01978.19 gi|15921765|ref|NP_377434.1| - 0.032 14.1 0.2 0.08 12.8 0.1 1.7 2 0 0 2 2 1 0 Sugar-specific transcriptional regulator TrmB HTH_38 PF13936.6 gi|15921765|ref|NP_377434.1| - 0.034 13.9 0.1 0.08 12.7 0.1 1.7 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_5 PF01022.20 gi|15921765|ref|NP_377434.1| - 0.039 13.8 0.4 0.087 12.7 0.4 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family HTH_30 PF13556.6 gi|15921765|ref|NP_377434.1| - 0.04 13.7 0.1 0.068 13.0 0.1 1.3 1 0 0 1 1 1 0 PucR C-terminal helix-turn-helix domain Clp_N PF02861.20 gi|15921765|ref|NP_377434.1| - 0.048 13.8 0.1 0.087 13.0 0.1 1.4 1 0 0 1 1 1 0 Clp amino terminal domain, pathogenicity island component Mga PF05043.13 gi|15921765|ref|NP_377434.1| - 0.053 14.1 0.0 0.16 12.6 0.0 1.8 2 0 0 2 2 1 0 Mga helix-turn-helix domain DUF4250 PF14056.6 gi|15921765|ref|NP_377434.1| - 0.084 12.8 0.2 0.24 11.4 0.2 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF4250) HTH_29 PF13551.6 gi|15921765|ref|NP_377434.1| - 0.15 12.1 0.0 0.24 11.5 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn helix HTH_28 PF13518.6 gi|15921765|ref|NP_377434.1| - 0.18 11.9 0.0 0.33 11.1 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain MarC PF01914.17 gi|15921766|ref|NP_377435.1| - 4.9e-30 104.4 16.8 6.1e-30 104.1 16.8 1.1 1 0 0 1 1 1 1 MarC family integral membrane protein bZIP_1 PF00170.21 gi|15921767|ref|NP_377436.1| - 0.0079 16.3 0.4 0.0079 16.3 0.4 2.4 2 1 1 3 3 3 1 bZIP transcription factor UvsW PF11637.8 gi|15921767|ref|NP_377436.1| - 0.024 14.7 0.8 0.86 9.7 0.0 2.4 1 1 1 2 2 2 0 ATP-dependant DNA helicase UvsW DUF4988 PF16378.5 gi|15921767|ref|NP_377436.1| - 0.045 13.4 0.6 0.068 12.8 0.6 1.3 1 0 0 1 1 1 0 Domain of unknown function PCAF_N PF06466.11 gi|15921767|ref|NP_377436.1| - 0.057 13.0 4.3 0.065 12.8 4.3 1.0 1 0 0 1 1 1 0 PCAF (P300/CBP-associated factor) N-terminal domain FliS PF02561.14 gi|15921767|ref|NP_377436.1| - 0.074 13.3 2.7 0.11 12.7 2.7 1.4 1 1 0 1 1 1 0 Flagellar protein FliS FlaC_arch PF05377.11 gi|15921767|ref|NP_377436.1| - 0.31 11.5 5.9 0.33 11.4 0.3 2.5 3 0 0 3 3 3 0 Flagella accessory protein C (FlaC) TMCO5 PF14992.6 gi|15921767|ref|NP_377436.1| - 0.44 10.1 9.9 0.54 9.8 9.9 1.0 1 0 0 1 1 1 0 TMCO5 family PNPase PF03726.14 gi|15921767|ref|NP_377436.1| - 3.9 8.0 7.6 11 6.6 1.3 2.6 1 1 1 2 2 2 0 Polyribonucleotide nucleotidyltransferase, RNA binding domain DHO_dh PF01180.21 gi|15921769|ref|NP_377438.1| - 1.4e-45 155.8 2.0 1.7e-45 155.5 2.0 1.1 1 0 0 1 1 1 1 Dihydroorotate dehydrogenase Amidohydro_1 PF01979.20 gi|15921770|ref|NP_377439.1| - 9.7e-11 41.6 0.0 1.8e-07 30.8 0.0 2.1 1 1 1 2 2 2 2 Amidohydrolase family Amidohydro_3 PF07969.11 gi|15921770|ref|NP_377439.1| - 6.9e-05 22.5 0.0 0.00015 21.4 0.0 1.5 2 0 0 2 2 2 1 Amidohydrolase family DHODB_Fe-S_bind PF10418.9 gi|15921771|ref|NP_377440.1| - 0.00034 20.4 2.6 0.00034 20.4 2.6 2.0 2 0 0 2 2 2 1 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B YqaH PF17448.2 gi|15921771|ref|NP_377440.1| - 0.12 12.7 0.0 0.16 12.3 0.0 1.2 1 0 0 1 1 1 0 Uncharacterized YqaH-like PyrI PF01948.18 gi|15921772|ref|NP_377441.1| - 9.2e-34 115.6 7.0 1.7e-33 114.7 7.0 1.4 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, allosteric domain PyrI_C PF02748.15 gi|15921772|ref|NP_377441.1| - 9.7e-14 51.0 2.6 2e-13 50.0 2.6 1.6 1 0 0 1 1 1 1 Aspartate carbamoyltransferase regulatory chain, metal binding domain OTCace_N PF02729.21 gi|15921773|ref|NP_377442.1| - 8.2e-43 146.0 0.0 2.4e-42 144.5 0.0 1.7 2 0 0 2 2 2 1 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain OTCace PF00185.24 gi|15921773|ref|NP_377442.1| - 1.7e-27 96.4 0.0 2.7e-27 95.8 0.0 1.3 1 0 0 1 1 1 1 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain Pribosyltran PF00156.27 gi|15921774|ref|NP_377443.1| - 1.2e-21 76.8 0.3 1.9e-21 76.3 0.3 1.3 1 0 0 1 1 1 1 Phosphoribosyl transferase domain UPRTase PF14681.6 gi|15921774|ref|NP_377443.1| - 0.00037 20.0 0.0 0.00063 19.2 0.0 1.4 1 0 0 1 1 1 1 Uracil phosphoribosyltransferase PRTase_2 PF15609.6 gi|15921774|ref|NP_377443.1| - 0.22 11.0 0.0 0.3 10.6 0.0 1.2 1 0 0 1 1 1 0 Phosphoribosyl transferase OMPdecase PF00215.24 gi|15921775|ref|NP_377444.1| - 2.1e-23 83.1 0.0 2.6e-23 82.8 0.0 1.1 1 0 0 1 1 1 1 Orotidine 5'-phosphate decarboxylase / HUMPS family EAP30 PF04157.16 gi|15921776|ref|NP_377445.1| - 0.026 13.8 0.1 0.036 13.4 0.1 1.2 1 0 0 1 1 1 0 EAP30/Vps36 family DUF4176 PF13780.6 gi|15921776|ref|NP_377445.1| - 0.05 13.7 1.1 2.1 8.4 0.4 2.7 2 1 0 2 2 2 0 Domain of unknown function (DUF4176) PhoU PF01895.19 gi|15921777|ref|NP_377446.1| - 4.2e-20 72.0 10.6 1.6e-17 63.7 1.5 2.9 3 0 0 3 3 3 2 PhoU domain MazE_antitoxin PF04014.18 gi|15921777|ref|NP_377446.1| - 1.6e-10 40.7 0.0 3.4e-10 39.6 0.0 1.6 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin HU-CCDC81_bac_2 PF18175.1 gi|15921778|ref|NP_377447.1| - 0.027 14.3 4.0 0.11 12.4 0.1 2.8 2 1 1 3 3 3 0 CCDC81-like prokaryotic HU domain 2 MT0933_antitox PF14013.6 gi|15921778|ref|NP_377447.1| - 0.042 14.1 0.6 0.069 13.5 0.6 1.3 1 0 0 1 1 1 0 MT0933-like antitoxin protein DUF2175 PF09943.9 gi|15921778|ref|NP_377447.1| - 0.61 10.4 3.6 6.4 7.1 0.8 2.5 3 0 0 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2175) HTH_5 PF01022.20 gi|15921779|ref|NP_377448.1| - 3.9e-11 42.6 0.1 6.1e-11 42.0 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|15921779|ref|NP_377448.1| - 9.7e-06 25.6 0.0 1.5e-05 25.0 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain TrmB PF01978.19 gi|15921779|ref|NP_377448.1| - 0.00039 20.2 0.0 0.00059 19.7 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_29 PF13551.6 gi|15921779|ref|NP_377448.1| - 0.00099 19.1 0.0 0.0016 18.5 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn helix HTH_24 PF13412.6 gi|15921779|ref|NP_377448.1| - 0.0013 18.2 0.3 0.0028 17.2 0.3 1.5 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 gi|15921779|ref|NP_377448.1| - 0.0059 16.5 0.1 0.011 15.7 0.1 1.5 1 0 0 1 1 1 1 HTH domain HTH_40 PF14493.6 gi|15921779|ref|NP_377448.1| - 0.0082 16.6 0.1 0.011 16.1 0.0 1.4 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_45 PF14947.6 gi|15921779|ref|NP_377448.1| - 0.015 15.3 0.2 0.027 14.4 0.2 1.6 1 1 0 1 1 1 0 Winged helix-turn-helix TnsD PF15978.5 gi|15921779|ref|NP_377448.1| - 0.12 11.3 0.0 0.14 11.1 0.0 1.1 1 0 0 1 1 1 0 Tn7-like transposition protein D Pyr_redox_2 PF07992.14 gi|15921780|ref|NP_377449.1| - 3e-62 210.5 2.3 4e-62 210.1 2.3 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|15921780|ref|NP_377449.1| - 4.8e-26 91.2 0.0 1e-25 90.1 0.0 1.6 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 gi|15921780|ref|NP_377449.1| - 7e-21 74.6 8.8 1.3e-17 64.2 0.1 2.8 3 0 0 3 3 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|15921780|ref|NP_377449.1| - 5.6e-13 48.8 5.8 1.3e-12 47.7 5.8 1.6 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_2 PF00890.24 gi|15921780|ref|NP_377449.1| - 2.7e-10 39.9 7.6 1.1e-07 31.3 3.3 2.8 3 0 0 3 3 3 2 FAD binding domain NAD_binding_8 PF13450.6 gi|15921780|ref|NP_377449.1| - 3.3e-10 40.0 0.8 1.8e-05 24.9 0.4 2.7 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 gi|15921780|ref|NP_377449.1| - 6.2e-10 38.3 11.0 3.2e-05 22.8 1.7 3.9 3 1 1 4 4 4 3 HI0933-like protein AlaDh_PNT_C PF01262.21 gi|15921780|ref|NP_377449.1| - 2.8e-09 36.6 0.4 0.00029 20.2 0.1 2.5 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain FAD_oxidored PF12831.7 gi|15921780|ref|NP_377449.1| - 6.1e-09 35.7 4.1 5.4e-08 32.6 1.1 2.4 2 1 0 2 2 2 1 FAD dependent oxidoreductase GIDA PF01134.22 gi|15921780|ref|NP_377449.1| - 2.6e-08 33.4 17.9 1.2e-06 27.9 6.1 4.4 3 2 1 4 4 4 2 Glucose inhibited division protein A DAO PF01266.24 gi|15921780|ref|NP_377449.1| - 8e-07 28.9 10.9 0.00021 21.0 2.9 3.3 3 0 0 3 3 3 2 FAD dependent oxidoreductase FAD_binding_3 PF01494.19 gi|15921780|ref|NP_377449.1| - 4.8e-05 22.8 1.7 0.0081 15.4 0.1 2.3 2 0 0 2 2 2 2 FAD binding domain Thi4 PF01946.17 gi|15921780|ref|NP_377449.1| - 0.00015 21.1 1.3 0.0049 16.1 0.1 2.7 3 0 0 3 3 3 1 Thi4 family Lycopene_cycl PF05834.12 gi|15921780|ref|NP_377449.1| - 0.00033 19.8 7.2 0.072 12.1 1.3 3.0 3 0 0 3 3 3 2 Lycopene cyclase protein Trp_halogenase PF04820.14 gi|15921780|ref|NP_377449.1| - 0.0014 17.5 3.9 0.064 12.1 0.8 2.3 2 0 0 2 2 2 2 Tryptophan halogenase K_oxygenase PF13434.6 gi|15921780|ref|NP_377449.1| - 0.025 13.7 0.1 4.8 6.2 0.0 2.5 2 1 1 3 3 3 0 L-lysine 6-monooxygenase (NADPH-requiring) MCRA PF06100.11 gi|15921780|ref|NP_377449.1| - 0.16 10.7 0.4 0.27 10.0 0.4 1.3 1 0 0 1 1 1 0 MCRA family TrkA_N PF02254.18 gi|15921780|ref|NP_377449.1| - 0.17 12.1 7.4 0.28 11.5 0.1 3.0 3 0 0 3 3 3 0 TrkA-N domain NAD_binding_9 PF13454.6 gi|15921780|ref|NP_377449.1| - 1.8 8.5 4.5 3.8 7.5 0.1 2.9 4 0 0 4 4 3 0 FAD-NAD(P)-binding TYW3 PF02676.14 gi|15921782|ref|NP_377451.1| - 6.5e-29 100.8 0.0 1.1e-28 100.1 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase TYW3 UCR_UQCRX_QCR9 PF05365.12 gi|15921782|ref|NP_377451.1| - 0.076 13.0 0.2 0.48 10.4 0.0 2.3 2 0 0 2 2 2 0 Ubiquinol-cytochrome C reductase, UQCRX/QCR9 like Fer4_14 PF13394.6 gi|15921783|ref|NP_377452.1| - 3.5e-15 56.2 0.0 6.8e-15 55.2 0.0 1.5 2 0 0 2 2 2 1 4Fe-4S single cluster domain Radical_SAM PF04055.21 gi|15921783|ref|NP_377452.1| - 6.7e-15 55.9 0.0 9.1e-15 55.4 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|15921783|ref|NP_377452.1| - 2.7e-10 40.7 0.1 4.8e-10 39.9 0.0 1.5 2 0 0 2 2 2 1 4Fe-4S single cluster domain CBS PF00571.28 gi|15921783|ref|NP_377452.1| - 0.029 14.8 1.7 9.5 6.8 0.0 3.9 3 2 1 4 4 4 0 CBS domain DUF2067 PF09840.9 gi|15921783|ref|NP_377452.1| - 0.095 12.3 0.2 16 5.0 0.0 2.9 2 1 1 3 3 3 0 Uncharacterized protein conserved in archaea (DUF2067) NOG1_N PF17835.1 gi|15921784|ref|NP_377453.1| - 5.3e-39 133.7 1.6 5.3e-39 133.7 1.6 2.1 2 0 0 2 2 2 1 NOG1 N-terminal helical domain MMR_HSR1 PF01926.23 gi|15921784|ref|NP_377453.1| - 4.6e-20 71.8 0.2 1.2e-19 70.4 0.2 1.7 1 0 0 1 1 1 1 50S ribosome-binding GTPase NOG1 PF06858.14 gi|15921784|ref|NP_377453.1| - 2.9e-17 62.2 3.6 3.4e-17 62.0 0.6 2.6 3 0 0 3 3 3 1 Nucleolar GTP-binding protein 1 (NOG1) FeoB_N PF02421.18 gi|15921784|ref|NP_377453.1| - 1.4e-14 53.9 0.5 2.2e-14 53.3 0.5 1.3 1 0 0 1 1 1 1 Ferrous iron transport protein B GTP_EFTU PF00009.27 gi|15921784|ref|NP_377453.1| - 1.2e-05 25.0 1.2 0.015 14.8 1.2 3.5 1 1 0 1 1 1 1 Elongation factor Tu GTP binding domain MMR_HSR1_Xtn PF16897.5 gi|15921784|ref|NP_377453.1| - 6.2e-05 23.0 0.7 0.00018 21.5 0.7 1.9 1 0 0 1 1 1 1 C-terminal region of MMR_HSR1 domain Dynamin_N PF00350.23 gi|15921784|ref|NP_377453.1| - 0.00013 22.0 2.0 0.00089 19.3 1.4 2.4 2 1 0 2 2 2 1 Dynamin family Ras PF00071.22 gi|15921784|ref|NP_377453.1| - 0.00024 20.7 0.1 0.00053 19.6 0.1 1.6 1 1 0 1 1 1 1 Ras family PduV-EutP PF10662.9 gi|15921784|ref|NP_377453.1| - 0.00025 20.8 1.0 0.00073 19.3 0.6 2.0 2 1 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation RsgA_GTPase PF03193.16 gi|15921784|ref|NP_377453.1| - 0.00047 20.1 3.9 0.037 13.9 0.2 2.9 2 1 0 2 2 2 1 RsgA GTPase AAA_18 PF13238.6 gi|15921784|ref|NP_377453.1| - 0.004 17.7 1.9 0.012 16.2 0.3 2.5 2 1 0 2 2 2 1 AAA domain AIG1 PF04548.16 gi|15921784|ref|NP_377453.1| - 0.0044 16.4 0.3 0.011 15.1 0.3 1.8 1 1 0 1 1 1 1 AIG1 family DnaB_C PF03796.15 gi|15921784|ref|NP_377453.1| - 0.0051 16.2 0.2 0.0097 15.3 0.2 1.5 1 0 0 1 1 1 1 DnaB-like helicase C terminal domain NTPase_1 PF03266.15 gi|15921784|ref|NP_377453.1| - 0.0057 16.6 1.8 0.019 14.9 0.1 2.2 2 0 0 2 2 2 1 NTPase TniB PF05621.11 gi|15921784|ref|NP_377453.1| - 0.019 14.4 0.0 0.068 12.6 0.0 1.9 2 0 0 2 2 2 0 Bacterial TniB protein SRPRB PF09439.10 gi|15921784|ref|NP_377453.1| - 0.019 14.4 0.5 0.069 12.6 0.2 2.2 2 1 0 2 2 2 0 Signal recognition particle receptor beta subunit ATP_bind_1 PF03029.17 gi|15921784|ref|NP_377453.1| - 0.019 14.7 0.2 4.7 6.9 0.0 2.3 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein Roc PF08477.13 gi|15921784|ref|NP_377453.1| - 0.033 14.4 0.0 0.29 11.4 0.0 2.4 1 1 0 1 1 1 0 Ras of Complex, Roc, domain of DAPkinase AAA_16 PF13191.6 gi|15921784|ref|NP_377453.1| - 0.055 13.9 0.0 0.12 12.8 0.0 1.5 1 0 0 1 1 1 0 AAA ATPase domain AAA_24 PF13479.6 gi|15921784|ref|NP_377453.1| - 0.076 12.7 0.2 0.16 11.7 0.2 1.5 1 1 0 1 1 1 0 AAA domain Peptidase_S66C PF17676.1 gi|15921784|ref|NP_377453.1| - 0.093 13.3 0.1 0.18 12.3 0.1 1.4 1 0 0 1 1 1 0 LD-carboxypeptidase C-terminal domain PriX PF18689.1 gi|15921784|ref|NP_377453.1| - 0.11 12.9 5.4 0.81 10.1 1.1 2.6 2 1 0 2 2 2 0 Primase X MnmE_helical PF12631.7 gi|15921784|ref|NP_377453.1| - 0.16 12.1 0.5 1.5 9.0 0.5 2.1 1 1 0 1 1 1 0 MnmE helical domain tRNA_bind PF01588.20 gi|15921785|ref|NP_377454.1| - 6.2e-29 100.0 0.1 7.1e-29 99.8 0.1 1.0 1 0 0 1 1 1 1 Putative tRNA binding domain SAICAR_synt PF01259.18 gi|15921786|ref|NP_377455.1| - 1.1e-55 189.0 0.4 1.2e-55 188.9 0.4 1.0 1 0 0 1 1 1 1 SAICAR synthetase PurS PF02700.14 gi|15921787|ref|NP_377456.1| - 8.5e-19 67.5 0.2 9.8e-19 67.3 0.2 1.0 1 0 0 1 1 1 1 Phosphoribosylformylglycinamidine (FGAM) synthase GATase_5 PF13507.6 gi|15921788|ref|NP_377457.1| - 2.4e-28 98.9 0.0 2.7e-28 98.8 0.0 1.0 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain DUF2141 PF09912.9 gi|15921788|ref|NP_377457.1| - 0.047 13.6 0.4 0.074 13.0 0.2 1.6 2 1 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2141) AIRS PF00586.24 gi|15921789|ref|NP_377458.1| - 7.6e-37 125.9 0.1 1.1e-19 70.9 0.1 2.3 2 0 0 2 2 2 2 AIR synthase related protein, N-terminal domain AIRS_C PF02769.22 gi|15921789|ref|NP_377458.1| - 7.3e-34 117.1 0.1 1e-27 97.2 0.2 2.2 2 0 0 2 2 2 2 AIR synthase related protein, C-terminal domain FGAR-AT_linker PF18072.1 gi|15921789|ref|NP_377458.1| - 6.3e-09 36.2 0.4 1.5e-08 35.1 0.4 1.7 1 0 0 1 1 1 1 Formylglycinamide ribonucleotide amidotransferase linker domain GATase_7 PF13537.6 gi|15921790|ref|NP_377459.1| - 8.9e-13 48.2 0.0 1.1e-11 44.7 0.0 2.3 1 1 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 gi|15921790|ref|NP_377459.1| - 9e-13 48.6 0.0 2.3e-12 47.3 0.0 1.7 1 1 0 1 1 1 1 Glutamine amidotransferase domain Pribosyltran PF00156.27 gi|15921790|ref|NP_377459.1| - 1.7e-07 30.9 0.4 3.1e-07 30.1 0.4 1.4 1 0 0 1 1 1 1 Phosphoribosyl transferase domain PRTase_3 PF15610.6 gi|15921790|ref|NP_377459.1| - 0.026 13.8 0.0 0.043 13.1 0.0 1.2 1 0 0 1 1 1 0 PRTase ComF-like PRTase_2 PF15609.6 gi|15921790|ref|NP_377459.1| - 0.054 13.0 0.1 0.084 12.4 0.1 1.2 1 0 0 1 1 1 0 Phosphoribosyl transferase Pribosyltran PF00156.27 gi|15921791|ref|NP_377460.1| - 3.2e-10 39.8 0.5 1.9e-09 37.3 0.5 2.0 1 1 0 1 1 1 1 Phosphoribosyl transferase domain GATase_7 PF13537.6 gi|15921791|ref|NP_377460.1| - 0.00048 20.0 0.0 0.00084 19.2 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain PRTase_2 PF15609.6 gi|15921791|ref|NP_377460.1| - 0.007 15.9 0.0 0.021 14.3 0.0 1.7 2 0 0 2 2 2 1 Phosphoribosyl transferase GARS_A PF01071.19 gi|15921792|ref|NP_377461.1| - 1.3e-41 142.5 0.0 3.3e-41 141.2 0.0 1.6 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain GARS_N PF02844.15 gi|15921792|ref|NP_377461.1| - 6.9e-23 81.3 0.0 1.4e-22 80.3 0.0 1.5 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, N domain GARS_C PF02843.16 gi|15921792|ref|NP_377461.1| - 4.7e-07 30.0 0.0 9.6e-07 29.0 0.0 1.6 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, C domain ATP-grasp_4 PF13535.6 gi|15921792|ref|NP_377461.1| - 0.00029 20.4 0.0 0.00086 18.9 0.0 1.8 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_ST PF14397.6 gi|15921792|ref|NP_377461.1| - 0.018 14.3 0.0 0.033 13.4 0.0 1.4 1 0 0 1 1 1 0 Sugar-transfer associated ATP-grasp CPSase_L_D2 PF02786.17 gi|15921792|ref|NP_377461.1| - 0.019 14.5 0.0 0.033 13.7 0.0 1.3 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain AIRS_C PF02769.22 gi|15921793|ref|NP_377462.1| - 5.2e-24 85.2 0.0 8e-24 84.5 0.0 1.3 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|15921793|ref|NP_377462.1| - 1.7e-16 60.6 0.5 2.7e-16 60.0 0.5 1.3 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain OrsD PF12013.8 gi|15921794|ref|NP_377463.1| - 0.0001 22.7 0.4 0.00016 22.1 0.4 1.3 1 0 0 1 1 1 1 Orsellinic acid/F9775 biosynthesis cluster protein D PapB PF03333.13 gi|15921794|ref|NP_377463.1| - 0.011 15.7 0.0 0.023 14.7 0.0 1.5 1 0 0 1 1 1 0 Adhesin biosynthesis transcription regulatory protein POC1 PF10450.9 gi|15921794|ref|NP_377463.1| - 0.019 14.0 0.1 0.026 13.5 0.1 1.2 1 0 0 1 1 1 0 POC1 chaperone DUF762 PF05555.11 gi|15921794|ref|NP_377463.1| - 0.02 14.5 0.5 0.021 14.4 0.5 1.2 1 0 0 1 1 1 0 Coxiella burnetii protein of unknown function (DUF762) zf_UBZ PF18439.1 gi|15921794|ref|NP_377463.1| - 0.021 14.4 0.3 0.036 13.6 0.3 1.4 1 0 0 1 1 1 0 Ubiquitin-Binding Zinc Finger DUF4120 PF13496.6 gi|15921794|ref|NP_377463.1| - 0.048 14.0 0.1 0.1 13.0 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4120) OmdA PF13376.6 gi|15921794|ref|NP_377463.1| - 0.18 11.8 0.7 0.52 10.4 0.1 1.9 2 0 0 2 2 2 0 Bacteriocin-protection, YdeI or OmpD-Associated Arginosuc_synth PF00764.19 gi|15921795|ref|NP_377464.1| - 1.4e-140 469.0 0.4 1.6e-140 468.8 0.4 1.0 1 0 0 1 1 1 1 Arginosuccinate synthase QueC PF06508.13 gi|15921795|ref|NP_377464.1| - 2.4e-05 23.9 0.1 6.8e-05 22.5 0.0 1.7 2 0 0 2 2 2 1 Queuosine biosynthesis protein QueC ATP_bind_3 PF01171.20 gi|15921795|ref|NP_377464.1| - 0.067 12.9 0.0 0.47 10.2 0.0 2.1 1 1 1 2 2 2 0 PP-loop family Lyase_1 PF00206.20 gi|15921796|ref|NP_377465.1| - 3.3e-42 145.0 0.0 5.2e-42 144.3 0.0 1.3 1 0 0 1 1 1 1 Lyase ASL_C2 PF14698.6 gi|15921796|ref|NP_377465.1| - 0.00067 20.4 0.0 0.0026 18.5 0.0 2.0 2 0 0 2 2 2 1 Argininosuccinate lyase C-terminal CPSase_sm_chain PF00988.22 gi|15921797|ref|NP_377466.1| - 1.6e-46 157.3 0.0 2.3e-46 156.8 0.0 1.2 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase small chain, CPSase domain GATase PF00117.28 gi|15921797|ref|NP_377466.1| - 1e-40 139.5 0.0 1.9e-40 138.7 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|15921797|ref|NP_377466.1| - 9.6e-07 28.8 0.6 0.00015 21.6 0.6 2.2 1 1 0 1 1 1 1 Peptidase C26 CPSase_L_D2 PF02786.17 gi|15921798|ref|NP_377467.1| - 1.7e-93 312.0 0.0 2.4e-64 216.7 0.0 2.3 2 0 0 2 2 2 2 Carbamoyl-phosphate synthase L chain, ATP binding domain CPSase_L_D3 PF02787.19 gi|15921798|ref|NP_377467.1| - 4.7e-34 117.3 0.3 1.5e-33 115.7 0.3 1.9 1 0 0 1 1 1 1 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ATP-grasp PF02222.22 gi|15921798|ref|NP_377467.1| - 2.2e-18 66.4 0.1 9.6e-09 35.0 0.0 2.3 2 0 0 2 2 2 2 ATP-grasp domain Dala_Dala_lig_C PF07478.13 gi|15921798|ref|NP_377467.1| - 1.1e-15 57.7 0.3 4.9e-08 32.8 0.2 2.5 2 0 0 2 2 2 2 D-ala D-ala ligase C-terminus ATPgrasp_Ter PF15632.6 gi|15921798|ref|NP_377467.1| - 1e-12 47.9 0.0 7.7e-06 25.7 0.0 2.5 2 0 0 2 2 2 2 ATP-grasp in the biosynthetic pathway with Ter operon ATP-grasp_3 PF02655.14 gi|15921798|ref|NP_377467.1| - 2.5e-09 37.4 0.3 2.3e-05 24.5 0.3 3.2 2 1 0 2 2 2 2 ATP-grasp domain ATP-grasp_5 PF13549.6 gi|15921798|ref|NP_377467.1| - 9.3e-08 31.8 0.0 0.002 17.7 0.0 2.8 2 0 0 2 2 2 2 ATP-grasp domain GARS_A PF01071.19 gi|15921798|ref|NP_377467.1| - 7.2e-07 29.2 0.3 0.00019 21.3 0.2 2.9 2 1 0 2 2 2 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RimK PF08443.11 gi|15921798|ref|NP_377467.1| - 9.3e-05 22.1 0.0 0.1 12.2 0.0 3.1 3 0 0 3 3 3 2 RimK-like ATP-grasp domain ATP-grasp_2 PF08442.10 gi|15921798|ref|NP_377467.1| - 0.0024 17.4 0.0 0.23 11.0 0.0 2.8 2 0 0 2 2 2 1 ATP-grasp domain Epimerase PF01370.21 gi|15921798|ref|NP_377467.1| - 0.055 12.9 0.0 13 5.1 0.0 2.4 2 0 0 2 2 2 0 NAD dependent epimerase/dehydratase family MGS PF02142.22 gi|15921798|ref|NP_377467.1| - 0.085 13.0 1.2 1.1 9.5 0.5 3.1 3 0 0 3 3 3 0 MGS-like domain Nitro_FeMo-Co PF02579.17 gi|15921798|ref|NP_377467.1| - 0.11 12.8 0.1 11 6.4 0.0 3.8 4 1 1 5 5 5 0 Dinitrogenase iron-molybdenum cofactor RimK PF08443.11 gi|15921799|ref|NP_377468.1| - 2.3e-26 92.6 0.0 3.8e-26 91.8 0.0 1.3 1 0 0 1 1 1 1 RimK-like ATP-grasp domain ATP-grasp_3 PF02655.14 gi|15921799|ref|NP_377468.1| - 3.7e-07 30.3 0.0 6.3e-07 29.6 0.0 1.4 1 0 0 1 1 1 1 ATP-grasp domain GSH-S_ATP PF02955.16 gi|15921799|ref|NP_377468.1| - 1.2e-05 24.8 0.0 2.2e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 Prokaryotic glutathione synthetase, ATP-grasp domain ATPgrasp_ST PF14397.6 gi|15921799|ref|NP_377468.1| - 0.0017 17.7 0.0 0.17 11.1 0.0 2.1 2 0 0 2 2 2 2 Sugar-transfer associated ATP-grasp Translin PF01997.16 gi|15921800|ref|NP_377469.1| - 9.2e-09 35.6 2.3 0.00018 21.5 0.0 2.3 1 1 1 2 2 2 2 Translin family SDH_sah PF01972.16 gi|15921800|ref|NP_377469.1| - 0.015 14.4 0.2 0.025 13.6 0.1 1.5 1 1 0 1 1 1 0 Serine dehydrogenase proteinase CREPT PF16566.5 gi|15921800|ref|NP_377469.1| - 0.024 14.8 3.2 0.13 12.4 0.7 2.1 2 0 0 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour Flu_NS2 PF00601.19 gi|15921800|ref|NP_377469.1| - 0.79 10.1 6.2 9.9 6.5 1.8 3.0 1 1 2 3 3 3 0 Influenza non-structural protein (NS2) 3HCDH_N PF02737.18 gi|15921801|ref|NP_377470.1| - 8.9e-49 165.8 0.0 1.7e-48 164.9 0.0 1.5 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 gi|15921801|ref|NP_377470.1| - 2.3e-19 69.8 0.1 5.5e-19 68.6 0.1 1.6 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NAD_Gly3P_dh_N PF01210.23 gi|15921801|ref|NP_377470.1| - 0.022 14.8 1.8 0.054 13.5 0.5 2.2 2 1 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus NAD_binding_2 PF03446.15 gi|15921801|ref|NP_377470.1| - 0.026 14.7 0.0 0.066 13.4 0.0 1.7 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase ApbA PF02558.16 gi|15921801|ref|NP_377470.1| - 0.2 11.3 0.1 0.4 10.3 0.1 1.7 1 1 0 1 1 1 0 Ketopantoate reductase PanE/ApbA Cupin_2 PF07883.11 gi|15921802|ref|NP_377471.1| - 6.3e-14 51.4 0.2 9e-14 50.9 0.2 1.2 1 0 0 1 1 1 1 Cupin domain Cupin_1 PF00190.22 gi|15921802|ref|NP_377471.1| - 7.6e-10 38.6 0.1 1.4e-09 37.7 0.1 1.4 1 0 0 1 1 1 1 Cupin AraC_binding PF02311.19 gi|15921802|ref|NP_377471.1| - 1.1e-08 35.0 0.0 1.8e-08 34.3 0.0 1.2 1 0 0 1 1 1 1 AraC-like ligand binding domain ARD PF03079.14 gi|15921802|ref|NP_377471.1| - 5.1e-05 23.5 0.4 0.00023 21.4 0.0 2.0 2 0 0 2 2 2 1 ARD/ARD' family CENP-C_C PF11699.8 gi|15921802|ref|NP_377471.1| - 0.00015 21.9 0.0 0.00025 21.2 0.0 1.3 1 0 0 1 1 1 1 Mif2/CENP-C like Asp_Arg_Hydrox PF05118.15 gi|15921802|ref|NP_377471.1| - 0.0015 18.4 0.0 0.0029 17.4 0.0 1.4 1 0 0 1 1 1 1 Aspartyl/Asparaginyl beta-hydroxylase DMSP_lyase PF16867.5 gi|15921802|ref|NP_377471.1| - 0.014 15.0 0.1 0.025 14.2 0.1 1.4 1 0 0 1 1 1 0 Dimethlysulfonioproprionate lyase Cupin_3 PF05899.12 gi|15921802|ref|NP_377471.1| - 0.031 14.0 0.1 0.049 13.3 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF861) Auxin_BP PF02041.16 gi|15921802|ref|NP_377471.1| - 0.072 12.8 0.0 0.18 11.5 0.0 1.6 1 1 0 1 1 1 0 Auxin binding protein MFS_1 PF07690.16 gi|15921803|ref|NP_377472.1| - 0.0012 17.8 8.1 0.22 10.4 8.1 2.0 2 0 0 2 2 2 2 Major Facilitator Superfamily DUF658 PF04936.12 gi|15921803|ref|NP_377472.1| - 0.0013 18.5 0.0 0.0019 18.0 0.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF658) VIT1 PF01988.19 gi|15921803|ref|NP_377472.1| - 0.0034 17.3 10.4 0.096 12.5 3.7 2.2 1 1 1 2 2 2 2 VIT family SpaA PF17802.1 gi|15921804|ref|NP_377473.1| - 0.0018 18.6 0.5 0.0023 18.2 0.5 1.2 1 0 0 1 1 1 1 Prealbumin-like fold domain CarboxypepD_reg PF13620.6 gi|15921804|ref|NP_377473.1| - 0.0068 16.6 0.1 0.037 14.3 0.1 2.0 1 1 1 2 2 2 1 Carboxypeptidase regulatory-like domain MG4 PF17789.1 gi|15921804|ref|NP_377473.1| - 0.056 13.6 0.0 0.093 12.9 0.0 1.4 1 1 0 1 1 1 0 Macroglobulin domain MG4 Adenosine_kin PF04008.14 gi|15921805|ref|NP_377474.1| - 3.4e-78 260.8 0.1 3.8e-78 260.6 0.1 1.0 1 0 0 1 1 1 1 Adenosine specific kinase DUF309 PF03745.14 gi|15921806|ref|NP_377475.1| - 1.4e-14 53.5 0.0 2e-14 53.0 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF309) PurS PF02700.14 gi|15921806|ref|NP_377475.1| - 0.0043 17.2 0.0 0.0074 16.4 0.0 1.4 1 0 0 1 1 1 1 Phosphoribosylformylglycinamidine (FGAM) synthase MRP-L28 PF09812.9 gi|15921806|ref|NP_377475.1| - 0.034 14.3 0.0 0.045 13.9 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial ribosomal protein L28 DUF1947 PF09183.10 gi|15921806|ref|NP_377475.1| - 0.07 13.4 0.4 0.07 13.4 0.4 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF1947) Radical_SAM PF04055.21 gi|15921808|ref|NP_377477.1| - 1.6e-16 61.2 0.2 2.3e-15 57.3 0.0 2.6 3 0 0 3 3 3 1 Radical SAM superfamily zf-ribbon_3 PF13248.6 gi|15921808|ref|NP_377477.1| - 0.0084 15.5 5.7 0.62 9.5 0.1 3.0 3 0 0 3 3 3 2 zinc-ribbon domain DZR PF12773.7 gi|15921808|ref|NP_377477.1| - 0.014 15.4 3.7 0.033 14.2 0.0 2.9 3 0 0 3 3 3 0 Double zinc ribbon TF_Zn_Ribbon PF08271.12 gi|15921808|ref|NP_377477.1| - 0.023 14.2 1.6 0.29 10.7 1.6 2.6 1 1 0 1 1 1 0 TFIIB zinc-binding IBR PF01485.21 gi|15921808|ref|NP_377477.1| - 0.04 14.1 0.2 0.04 14.1 0.2 1.8 2 0 0 2 2 2 0 IBR domain, a half RING-finger domain zf-RING_7 PF02591.15 gi|15921808|ref|NP_377477.1| - 0.05 13.8 1.9 0.31 11.2 0.2 2.8 2 0 0 2 2 2 0 C4-type zinc ribbon domain Fer4_12 PF13353.6 gi|15921808|ref|NP_377477.1| - 0.097 12.9 0.1 0.5 10.6 0.0 2.2 2 0 0 2 2 2 0 4Fe-4S single cluster domain zf-ISL3 PF14690.6 gi|15921808|ref|NP_377477.1| - 0.42 11.3 3.8 2 9.1 0.0 3.1 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DNA_RNApol_7kD PF03604.13 gi|15921808|ref|NP_377477.1| - 0.83 9.4 0.0 0.83 9.4 0.0 4.4 5 0 0 5 5 5 0 DNA directed RNA polymerase, 7 kDa subunit PriA_CRR PF18319.1 gi|15921808|ref|NP_377477.1| - 2 8.5 5.4 0.69 10.0 0.2 2.7 2 0 0 2 2 2 0 PriA DNA helicase Cys-rich region (CRR) domain zinc_ribbon_2 PF13240.6 gi|15921808|ref|NP_377477.1| - 2.3 8.0 11.6 0.79 9.5 0.3 3.0 3 0 0 3 3 2 0 zinc-ribbon domain zf-C2H2 PF00096.26 gi|15921808|ref|NP_377477.1| - 5.2 7.7 5.6 36 5.1 0.1 3.0 3 0 0 3 3 2 0 Zinc finger, C2H2 type ECH_1 PF00378.20 gi|15921809|ref|NP_377478.1| - 9.1e-71 238.1 0.0 1e-70 237.9 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|15921809|ref|NP_377478.1| - 4.7e-42 144.7 0.0 2.1e-40 139.3 0.0 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase UbiA PF01040.18 gi|15921811|ref|NP_377480.1| - 4.5e-50 170.3 19.0 6.1e-50 169.9 19.0 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family DUF5337 PF17272.2 gi|15921811|ref|NP_377480.1| - 0.0016 18.2 7.2 0.033 14.0 0.0 3.3 3 0 0 3 3 3 2 Family of unknown function (DUF5337) Homoserine_dh PF00742.19 gi|15921812|ref|NP_377481.1| - 4.1e-44 150.5 0.0 8e-44 149.6 0.0 1.5 1 0 0 1 1 1 1 Homoserine dehydrogenase NAD_binding_3 PF03447.16 gi|15921812|ref|NP_377481.1| - 1.6e-09 38.4 0.0 2.8e-09 37.7 0.0 1.4 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain B3_4 PF03483.17 gi|15921813|ref|NP_377482.1| - 7.1e-28 97.4 0.0 1.5e-27 96.4 0.0 1.5 2 0 0 2 2 2 1 B3/4 domain NikR_C PF08753.11 gi|15921814|ref|NP_377483.1| - 2.2e-18 66.1 1.3 3.7e-18 65.5 1.3 1.4 1 0 0 1 1 1 1 NikR C terminal nickel binding domain DUF2811 PF10929.8 gi|15921814|ref|NP_377483.1| - 6.3e-06 26.4 0.0 9.5e-06 25.8 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF2811) RHH_1 PF01402.21 gi|15921814|ref|NP_377483.1| - 0.00022 21.0 0.5 0.00064 19.6 0.5 1.8 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family RHH_5 PF07878.11 gi|15921814|ref|NP_377483.1| - 0.0094 15.8 0.1 0.016 15.1 0.1 1.4 1 0 0 1 1 1 1 CopG-like RHH_1 or ribbon-helix-helix domain, RHH_5 Urm1 PF09138.11 gi|15921814|ref|NP_377483.1| - 0.013 15.8 0.3 0.022 15.1 0.3 1.4 1 0 0 1 1 1 0 Urm1 (Ubiquitin related modifier) DUF211 PF02680.14 gi|15921814|ref|NP_377483.1| - 0.12 12.6 1.5 0.94 9.7 0.0 2.2 1 1 1 2 2 2 0 Uncharacterized ArCR, COG1888 PmbA_TldD PF01523.16 gi|15921815|ref|NP_377484.1| - 8.7e-39 134.0 0.2 1.3e-38 133.4 0.1 1.4 2 0 0 2 2 2 1 Putative modulator of DNA gyrase PmbA_TldD PF01523.16 gi|15921816|ref|NP_377485.1| - 5e-34 118.4 0.0 7.6e-34 117.8 0.0 1.2 1 0 0 1 1 1 1 Putative modulator of DNA gyrase Usp PF00582.26 gi|15921817|ref|NP_377486.1| - 2.4e-39 135.1 0.6 2.7e-39 134.9 0.6 1.0 1 0 0 1 1 1 1 Universal stress protein family BPL_LplA_LipB PF03099.19 gi|15921818|ref|NP_377487.1| - 2.4e-14 53.4 0.0 4.1e-14 52.6 0.0 1.3 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family GAT PF03127.14 gi|15921818|ref|NP_377487.1| - 0.065 13.5 1.6 0.11 12.8 1.0 1.7 1 1 0 1 1 1 0 GAT domain Sua5_yciO_yrdC PF01300.18 gi|15921819|ref|NP_377488.1| - 5.7e-56 188.8 0.0 8.1e-56 188.3 0.0 1.2 1 0 0 1 1 1 1 Telomere recombination SUA5 PF03481.13 gi|15921819|ref|NP_377488.1| - 1.7e-26 93.3 0.0 2.4e-26 92.9 0.0 1.2 1 0 0 1 1 1 1 Putative GTP-binding controlling metal-binding Oxidored_q6 PF01058.22 gi|15921820|ref|NP_377489.1| - 7.7e-21 74.3 0.0 1.2e-20 73.7 0.0 1.3 1 0 0 1 1 1 1 NADH ubiquinone oxidoreductase, 20 Kd subunit Peptidase_M20 PF01546.28 gi|15921822|ref|NP_377491.1| - 2.4e-39 135.2 0.0 3.3e-39 134.7 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|15921822|ref|NP_377491.1| - 1.1e-18 67.1 0.0 2.1e-18 66.2 0.0 1.4 1 0 0 1 1 1 1 Peptidase dimerisation domain Peptidase_M28 PF04389.17 gi|15921822|ref|NP_377491.1| - 2.6e-06 27.3 0.0 2.4e-05 24.1 0.0 2.0 2 0 0 2 2 2 1 Peptidase family M28 Peptidase_M42 PF05343.14 gi|15921822|ref|NP_377491.1| - 0.033 13.2 0.0 1.1 8.3 0.0 2.7 3 0 0 3 3 3 0 M42 glutamyl aminopeptidase VHL_C PF17211.3 gi|15921822|ref|NP_377491.1| - 0.045 13.8 0.0 0.9 9.6 0.0 2.3 2 0 0 2 2 2 0 VHL box domain Tox-PL-2 PF15643.6 gi|15921822|ref|NP_377491.1| - 0.17 12.0 0.0 0.47 10.6 0.0 1.7 1 0 0 1 1 1 0 Papain fold toxin 2 MFS_1 PF07690.16 gi|15921823|ref|NP_377492.1| - 4.8e-22 78.4 36.7 9.4e-18 64.2 20.8 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_3 PF05977.13 gi|15921823|ref|NP_377492.1| - 0.014 13.8 0.2 0.014 13.8 0.2 1.5 2 0 0 2 2 2 0 Transmembrane secretion effector POR PF01558.18 gi|15921824|ref|NP_377493.1| - 1.2e-36 126.4 0.0 1.5e-36 126.1 0.0 1.1 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase Aminotran_1_2 PF00155.21 gi|15921824|ref|NP_377493.1| - 0.11 11.7 0.1 2.5 7.2 0.1 2.0 1 1 0 1 1 1 0 Aminotransferase class I and II POR_N PF01855.19 gi|15921825|ref|NP_377494.1| - 2.1e-69 233.8 2.1 2.8e-69 233.4 2.1 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PFOR_II PF17147.4 gi|15921825|ref|NP_377494.1| - 1.9e-33 114.8 0.1 3.6e-33 113.9 0.1 1.5 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II Transketolase_C PF02780.20 gi|15921825|ref|NP_377494.1| - 1.8e-06 27.8 0.0 4.1e-06 26.7 0.0 1.6 1 0 0 1 1 1 1 Transketolase, C-terminal domain CHASE4 PF05228.13 gi|15921825|ref|NP_377494.1| - 0.043 14.0 0.1 0.091 13.0 0.1 1.6 1 0 0 1 1 1 0 CHASE4 domain TPP_enzyme_C PF02775.21 gi|15921826|ref|NP_377495.1| - 1.1e-18 67.4 0.1 2.5e-18 66.3 0.0 1.5 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DXP_synthase_N PF13292.6 gi|15921826|ref|NP_377495.1| - 0.00048 19.4 1.1 0.00062 19.1 0.1 1.6 2 0 0 2 2 2 1 1-deoxy-D-xylulose-5-phosphate synthase E1_dh PF00676.20 gi|15921826|ref|NP_377495.1| - 0.0075 15.2 0.1 0.0075 15.2 0.1 1.5 2 0 0 2 2 2 1 Dehydrogenase E1 component VIT1 PF01988.19 gi|15921827|ref|NP_377496.1| - 1e-38 133.4 3.3 1e-38 133.4 3.3 1.6 2 0 0 2 2 2 1 VIT family DUF2465 PF10239.9 gi|15921827|ref|NP_377496.1| - 0.056 12.7 0.4 0.18 11.0 0.3 1.7 1 1 0 1 1 1 0 Protein of unknown function (DUF2465) Rubrerythrin PF02915.17 gi|15921827|ref|NP_377496.1| - 0.23 11.9 12.3 0.079 13.3 8.1 2.3 2 1 0 2 2 2 0 Rubrerythrin PaREP1 PF05942.11 gi|15921828|ref|NP_377497.1| - 6.5e-19 68.0 0.0 8e-19 67.7 0.0 1.1 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family MazE_antitoxin PF04014.18 gi|15921829|ref|NP_377498.1| - 1.5e-13 50.3 1.2 1.9e-13 50.0 1.2 1.2 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin AbrB-like PF14250.6 gi|15921829|ref|NP_377498.1| - 0.00029 20.8 0.1 0.00039 20.4 0.1 1.2 1 0 0 1 1 1 1 AbrB-like transcriptional regulator DUF104 PF01954.16 gi|15921829|ref|NP_377498.1| - 0.01 16.3 1.4 0.015 15.7 1.2 1.5 1 1 0 1 1 1 0 Protein of unknown function DUF104 PrlF_antitoxin PF15937.5 gi|15921829|ref|NP_377498.1| - 0.012 16.1 0.1 0.013 16.0 0.1 1.1 1 0 0 1 1 1 0 prlF antitoxin for toxin YhaV_toxin DUF1905 PF08922.11 gi|15921829|ref|NP_377498.1| - 0.038 14.0 0.1 0.069 13.2 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF1905) Thump_like PF18096.1 gi|15921829|ref|NP_377498.1| - 0.054 13.4 0.1 0.099 12.6 0.1 1.4 1 0 0 1 1 1 0 THUMP domain-like CTP-dep_RFKase PF01982.16 gi|15921829|ref|NP_377498.1| - 0.057 13.5 0.3 0.087 12.9 0.3 1.3 1 0 0 1 1 1 0 Domain of unknown function DUF120 OsmC PF02566.19 gi|15921830|ref|NP_377499.1| - 2.3e-12 47.3 0.1 3.5e-12 46.7 0.1 1.2 1 0 0 1 1 1 1 OsmC-like protein Spore_III_AF PF09581.10 gi|15921830|ref|NP_377499.1| - 0.07 13.2 0.2 0.096 12.7 0.2 1.1 1 0 0 1 1 1 0 Stage III sporulation protein AF (Spore_III_AF) DUF525 PF04379.14 gi|15921830|ref|NP_377499.1| - 0.17 12.1 0.0 0.21 11.9 0.0 1.2 1 0 0 1 1 1 0 ApaG domain ATP-grasp_5 PF13549.6 gi|15921831|ref|NP_377500.1| - 7.7e-50 169.4 1.1 1.6e-49 168.4 0.6 1.8 2 0 0 2 2 2 1 ATP-grasp domain Succ_CoA_lig PF13607.6 gi|15921831|ref|NP_377500.1| - 3.2e-49 166.3 0.2 8.5e-49 164.9 0.0 1.8 2 0 0 2 2 2 1 Succinyl-CoA ligase like flavodoxin domain CoA_binding_2 PF13380.6 gi|15921831|ref|NP_377500.1| - 2.7e-25 89.1 3.5 5e-25 88.3 0.5 2.8 2 1 0 2 2 2 1 CoA binding domain CoA_binding PF02629.19 gi|15921831|ref|NP_377500.1| - 1.2e-15 57.9 0.8 4.9e-15 56.0 0.8 2.1 1 0 0 1 1 1 1 CoA binding domain ATP-grasp_2 PF08442.10 gi|15921831|ref|NP_377500.1| - 1e-05 25.2 0.7 0.00055 19.6 0.4 2.9 2 1 0 2 2 2 1 ATP-grasp domain GFO_IDH_MocA PF01408.22 gi|15921831|ref|NP_377500.1| - 0.00086 20.1 0.5 0.13 13.1 0.1 3.3 3 0 0 3 3 3 1 Oxidoreductase family, NAD-binding Rossmann fold GARS_A PF01071.19 gi|15921831|ref|NP_377500.1| - 0.0033 17.2 0.1 0.0098 15.7 0.1 1.8 1 0 0 1 1 1 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain F420_oxidored PF03807.17 gi|15921831|ref|NP_377500.1| - 0.0084 16.7 3.7 0.11 13.1 0.2 3.6 4 0 0 4 4 4 1 NADP oxidoreductase coenzyme F420-dependent ATP-grasp PF02222.22 gi|15921831|ref|NP_377500.1| - 0.035 13.7 1.8 0.068 12.7 0.1 2.3 3 0 0 3 3 3 0 ATP-grasp domain RimK PF08443.11 gi|15921831|ref|NP_377500.1| - 0.048 13.2 0.3 0.11 12.0 0.0 1.7 2 0 0 2 2 2 0 RimK-like ATP-grasp domain CPSase_L_D2 PF02786.17 gi|15921831|ref|NP_377500.1| - 0.055 12.9 0.0 0.1 12.1 0.0 1.4 1 0 0 1 1 1 0 Carbamoyl-phosphate synthase L chain, ATP binding domain NAD_Gly3P_dh_N PF01210.23 gi|15921831|ref|NP_377500.1| - 0.095 12.7 0.2 0.095 12.7 0.2 2.4 3 0 0 3 3 3 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DUF4849 PF16141.5 gi|15921831|ref|NP_377500.1| - 0.12 11.6 0.1 0.22 10.7 0.1 1.4 1 0 0 1 1 1 0 Putative glycoside hydrolase Family 18, chitinase_18 DUF981 PF06168.11 gi|15921832|ref|NP_377501.1| - 1e-56 191.9 23.0 1.1e-56 191.7 23.0 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF981) DUF2427 PF10348.9 gi|15921832|ref|NP_377501.1| - 0.039 13.7 0.7 0.039 13.7 0.7 2.1 2 1 0 2 2 2 0 Domain of unknown function (DUF2427) Tetraspanin PF00335.20 gi|15921832|ref|NP_377501.1| - 0.11 12.2 0.3 0.11 12.2 0.3 2.6 1 1 0 2 2 2 0 Tetraspanin family TssN PF17555.2 gi|15921832|ref|NP_377501.1| - 0.37 10.1 11.8 0.24 10.8 9.8 1.6 1 1 0 1 1 1 0 Type VI secretion system, TssN DUF3021 PF11457.8 gi|15921832|ref|NP_377501.1| - 3.5 8.0 14.3 11 6.4 5.8 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3021) DUF2070 PF09843.9 gi|15921832|ref|NP_377501.1| - 8.9 4.5 11.5 2.6 6.3 8.8 1.4 1 1 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF998 PF06197.13 gi|15921833|ref|NP_377502.1| - 3.2e-30 105.1 14.5 3.5e-30 105.0 14.5 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF998) DUF1304 PF06993.12 gi|15921833|ref|NP_377502.1| - 2.3 8.3 15.6 8.7 6.4 0.4 2.8 1 1 1 2 2 2 0 Protein of unknown function (DUF1304) AC_N PF16214.5 gi|15921833|ref|NP_377502.1| - 2.8 7.0 6.0 3.4 6.7 6.0 1.1 1 0 0 1 1 1 0 Adenylyl cyclase N-terminal extracellular and transmembrane region NS3_envE PF02723.14 gi|15921834|ref|NP_377503.1| - 0.27 11.3 4.0 1.4 9.0 0.1 2.3 2 0 0 2 2 2 0 Non-structural protein NS3/Small envelope protein E DUF3098 PF11297.8 gi|15921834|ref|NP_377503.1| - 3.3 7.4 7.5 5.2 6.8 0.5 2.3 2 0 0 2 2 2 0 Protein of unknown function (DUF3098) Thymidylate_kin PF02223.17 gi|15921836|ref|NP_377505.1| - 0.0011 18.7 0.1 0.0024 17.6 0.1 1.5 1 1 0 1 1 1 1 Thymidylate kinase Thymidylate_kin PF02223.17 gi|15921837|ref|NP_377506.1| - 1.8e-28 99.5 0.0 1.1e-27 96.9 0.0 1.8 1 1 0 1 1 1 1 Thymidylate kinase dNK PF01712.19 gi|15921837|ref|NP_377506.1| - 4.6e-05 23.4 0.3 0.00028 20.8 0.3 2.0 1 1 0 1 1 1 1 Deoxynucleoside kinase AAA_18 PF13238.6 gi|15921837|ref|NP_377506.1| - 0.00072 20.1 0.0 0.0014 19.1 0.0 1.5 1 1 0 1 1 1 1 AAA domain AAA_17 PF13207.6 gi|15921837|ref|NP_377506.1| - 0.018 15.4 0.0 0.076 13.4 0.0 2.0 2 1 0 2 2 2 0 AAA domain Hfx_Cass5 PF18287.1 gi|15921837|ref|NP_377506.1| - 0.12 12.6 0.0 0.33 11.2 0.0 1.6 1 0 0 1 1 1 0 Integron Cassette Protein Hfx_Cass5 Ppx-GppA PF02541.16 gi|15921838|ref|NP_377507.1| - 2.5e-43 148.5 0.1 4.7e-43 147.7 0.1 1.3 1 0 0 1 1 1 1 Ppx/GppA phosphatase family His_Phos_1 PF00300.22 gi|15921840|ref|NP_377509.1| - 4.4e-15 55.9 0.0 4.1e-13 49.5 0.0 2.0 2 0 0 2 2 2 2 Histidine phosphatase superfamily (branch 1) Peptidase_M48 PF01435.18 gi|15921841|ref|NP_377510.1| - 1.6e-20 73.7 0.0 3e-20 72.8 0.0 1.4 1 1 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|15921841|ref|NP_377510.1| - 8.3e-06 25.2 0.2 1.6e-05 24.3 0.1 1.5 1 1 0 1 1 1 1 BlaR1 peptidase M56 Lactamase_B PF00753.27 gi|15921842|ref|NP_377511.1| - 2.2e-24 86.6 0.0 2.8e-24 86.2 0.0 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|15921842|ref|NP_377511.1| - 1.5e-05 24.6 0.0 1.7e-05 24.4 0.0 1.1 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 gi|15921842|ref|NP_377511.1| - 0.0032 16.9 0.2 0.011 15.1 0.2 1.8 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily domain Lactamase_B_3 PF13483.6 gi|15921842|ref|NP_377511.1| - 0.03 14.2 0.1 0.043 13.7 0.1 1.4 1 0 0 1 1 1 0 Beta-lactamase superfamily domain Peptidase_U32 PF01136.19 gi|15921843|ref|NP_377512.1| - 2e-16 59.8 0.1 5.6e-11 42.0 0.0 2.2 2 0 0 2 2 2 2 Peptidase family U32 NAGidase PF07555.13 gi|15921843|ref|NP_377512.1| - 0.00025 20.5 0.8 0.0085 15.5 0.1 2.1 1 1 1 2 2 2 2 beta-N-acetylglucosaminidase OCRL_clath_bd PF16726.5 gi|15921844|ref|NP_377513.1| - 0.094 12.9 0.1 0.11 12.7 0.1 1.1 1 0 0 1 1 1 0 Inositol polyphosphate 5-phosphatase clathrin binding domain Ubie_methyltran PF01209.18 gi|15921845|ref|NP_377514.1| - 2.2e-21 76.3 0.4 4.1e-21 75.4 0.4 1.3 1 1 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_11 PF08241.12 gi|15921845|ref|NP_377514.1| - 1.8e-12 47.7 0.0 2.8e-12 47.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|15921845|ref|NP_377514.1| - 1.2e-10 42.0 0.0 2.5e-10 40.9 0.0 1.5 1 1 0 1 1 1 1 Methyltransferase domain MetW PF07021.12 gi|15921845|ref|NP_377514.1| - 2.3e-06 27.3 0.0 7.9e-06 25.6 0.0 1.8 1 1 0 1 1 1 1 Methionine biosynthesis protein MetW Methyltransf_31 PF13847.6 gi|15921845|ref|NP_377514.1| - 3e-06 27.1 0.0 8.9e-06 25.6 0.0 1.7 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|15921845|ref|NP_377514.1| - 4.5e-05 23.4 0.0 6.3e-05 22.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|15921845|ref|NP_377514.1| - 0.00024 21.8 0.0 0.00046 20.9 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.15 gi|15921845|ref|NP_377514.1| - 0.016 15.0 0.0 0.025 14.4 0.0 1.4 1 0 0 1 1 1 0 Hypothetical methyltransferase DASH_Dad1 PF08649.10 gi|15921845|ref|NP_377514.1| - 0.087 13.0 0.0 0.19 11.9 0.0 1.5 1 0 0 1 1 1 0 DASH complex subunit Dad1 MarR_2 PF12802.7 gi|15921848|ref|NP_377517.1| - 0.00016 21.5 0.0 0.00028 20.7 0.0 1.3 1 0 0 1 1 1 1 MarR family AbiEi_4 PF13338.6 gi|15921848|ref|NP_377517.1| - 0.024 14.8 0.0 0.059 13.5 0.0 1.6 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin DUF565 PF04483.12 gi|15921848|ref|NP_377517.1| - 0.029 14.9 0.0 0.061 13.9 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF565) Peptidase_S24 PF00717.23 gi|15921849|ref|NP_377518.1| - 0.0011 18.9 0.0 0.0019 18.1 0.0 1.4 1 0 0 1 1 1 1 Peptidase S24-like DUF11 PF01345.18 gi|15921850|ref|NP_377519.1| - 0.078 13.3 3.5 0.092 13.1 2.5 1.6 1 1 0 1 1 1 0 Domain of unknown function DUF11 DUF5305 PF17231.2 gi|15921852|ref|NP_377521.1| - 7.8e-12 45.1 3.9 7.8e-12 45.1 3.9 2.4 3 0 0 3 3 3 1 Family of unknown function (DUF5305) HTH_45 PF14947.6 gi|15921853|ref|NP_377522.1| - 1.2e-23 82.9 1.8 1.2e-23 82.9 1.8 1.5 2 0 0 2 2 2 1 Winged helix-turn-helix DUF4364 PF14277.6 gi|15921853|ref|NP_377522.1| - 0.00018 21.3 0.9 0.00044 20.0 0.9 1.6 2 0 0 2 2 2 1 Domain of unknown function (DUF4364) Get5_C PF18514.1 gi|15921853|ref|NP_377522.1| - 0.13 12.0 0.8 0.32 10.8 0.7 1.7 1 1 0 1 1 1 0 Get5 C-terminal domain LAGLIDADG_WhiA PF14527.6 gi|15921853|ref|NP_377522.1| - 0.14 12.3 1.5 0.2 11.8 1.5 1.5 1 1 0 1 1 1 0 WhiA LAGLIDADG-like domain DUF4898 PF16239.5 gi|15921854|ref|NP_377523.1| - 9.2e-23 80.0 7.1 1.1e-22 79.8 7.1 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF4898) DUF4488 PF14869.6 gi|15921854|ref|NP_377523.1| - 0.038 13.9 0.0 0.041 13.8 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4488) EI24 PF07264.11 gi|15921855|ref|NP_377524.1| - 0.074 13.3 8.0 0.14 12.4 8.0 1.4 1 1 0 1 1 1 0 Etoposide-induced protein 2.4 (EI24) MgtE PF01769.16 gi|15921855|ref|NP_377524.1| - 0.093 13.1 4.8 2.1 8.7 0.0 2.5 2 1 0 2 2 2 0 Divalent cation transporter Fig1 PF12351.8 gi|15921855|ref|NP_377524.1| - 0.31 10.9 8.9 1.8 8.4 0.8 2.1 2 0 0 2 2 2 0 Ca2+ regulator and membrane fusion protein Fig1 PRA1 PF03208.19 gi|15921855|ref|NP_377524.1| - 0.4 10.3 7.3 0.56 9.8 2.7 2.1 2 0 0 2 2 2 0 PRA1 family protein Baculo_11_kDa PF06143.11 gi|15921855|ref|NP_377524.1| - 0.48 10.0 5.3 5.7 6.6 1.6 2.6 2 0 0 2 2 2 0 Baculovirus 11 kDa family DUF2207 PF09972.9 gi|15921855|ref|NP_377524.1| - 0.79 8.4 16.8 0.0062 15.3 3.7 2.0 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) TRIQK PF15168.6 gi|15921855|ref|NP_377524.1| - 2.1 8.3 10.2 0.82 9.6 1.2 2.5 2 0 0 2 2 2 0 Triple QxxK/R motif-containing protein family UbiA PF01040.18 gi|15921855|ref|NP_377524.1| - 4.5 6.5 14.2 4.3 6.5 1.0 2.1 2 0 0 2 2 2 0 UbiA prenyltransferase family PaREP1 PF05942.11 gi|15921856|ref|NP_377525.1| - 1.1e-24 86.5 0.6 1.5e-24 86.1 0.6 1.3 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family INTS5_N PF14837.6 gi|15921856|ref|NP_377525.1| - 0.096 12.3 0.0 0.098 12.2 0.0 1.3 1 0 0 1 1 1 0 Integrator complex subunit 5 N-terminus HTH_45 PF14947.6 gi|15921859|ref|NP_377528.1| - 1.4e-20 73.1 1.8 1.9e-20 72.6 1.8 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DUF4364 PF14277.6 gi|15921859|ref|NP_377528.1| - 3.3e-05 23.7 0.7 3.3e-05 23.7 0.7 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF4364) GRASP55_65 PF04495.14 gi|15921859|ref|NP_377528.1| - 0.00068 20.0 0.0 0.00082 19.7 0.0 1.1 1 0 0 1 1 1 1 GRASP55/65 PDZ-like domain Mrr_N PF14338.6 gi|15921859|ref|NP_377528.1| - 0.038 14.1 0.1 4.1 7.6 0.0 2.8 1 1 2 3 3 3 0 Mrr N-terminal domain Mor PF08765.11 gi|15921859|ref|NP_377528.1| - 0.1 12.6 0.1 0.19 11.7 0.1 1.4 1 0 0 1 1 1 0 Mor transcription activator family HTH_19 PF12844.7 gi|15921859|ref|NP_377528.1| - 0.14 12.2 2.3 2.5 8.2 0.1 2.4 2 1 0 2 2 2 0 Helix-turn-helix domain Med30 PF11315.8 gi|15921859|ref|NP_377528.1| - 0.19 11.9 2.0 0.63 10.2 2.0 1.7 1 1 0 1 1 1 0 Mediator complex subunit 30 Transp_cyt_pur PF02133.15 gi|15921861|ref|NP_377530.1| - 2.5e-61 207.8 48.6 3.9e-61 207.2 47.9 2.1 1 1 0 1 1 1 1 Permease for cytosine/purines, uracil, thiamine, allantoin UPF0016 PF01169.19 gi|15921861|ref|NP_377530.1| - 0.013 15.8 13.2 0.58 10.5 0.2 4.0 3 0 0 3 3 3 0 Uncharacterized protein family UPF0016 DUF4652 PF15525.6 gi|15921861|ref|NP_377530.1| - 0.18 11.6 0.1 0.28 10.9 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4652) Pkinase PF00069.25 gi|15921862|ref|NP_377531.1| - 1e-25 90.6 0.0 1.5e-25 90.1 0.0 1.1 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 gi|15921862|ref|NP_377531.1| - 9.1e-10 38.2 0.0 3.1e-09 36.5 0.0 1.9 1 1 0 1 1 1 1 Protein tyrosine kinase DUF973 PF06157.11 gi|15921863|ref|NP_377532.1| - 1.5e-23 83.4 39.3 6.1e-22 78.1 39.3 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF973) DUF996 PF06195.13 gi|15921863|ref|NP_377532.1| - 5.6e-07 29.9 23.2 0.00026 21.3 12.5 3.1 1 1 2 3 3 3 3 Protein of unknown function (DUF996) Bac_export_2 PF01312.19 gi|15921863|ref|NP_377532.1| - 3.7 6.7 5.2 7 5.8 5.2 1.4 1 0 0 1 1 1 0 FlhB HrpN YscU SpaS Family PALP PF00291.25 gi|161751092|ref|NP_377533.2| - 7e-36 124.1 0.0 8.5e-36 123.9 0.0 1.1 1 0 0 1 1 1 1 Pyridoxal-phosphate dependent enzyme Amidase_5 PF05382.13 gi|161751092|ref|NP_377533.2| - 0.011 15.7 0.1 0.021 14.7 0.1 1.4 1 0 0 1 1 1 0 Bacteriophage peptidoglycan hydrolase CP_ATPgrasp_2 PF14403.6 gi|15921865|ref|NP_377534.1| - 2.8e-84 283.2 0.0 3.5e-84 282.9 0.0 1.1 1 0 0 1 1 1 1 Circularly permuted ATP-grasp type 2 CP_ATPgrasp_1 PF04174.13 gi|15921865|ref|NP_377534.1| - 1.5e-61 208.3 0.1 3.1e-61 207.2 0.1 1.5 1 1 0 1 1 1 1 A circularly permuted ATPgrasp ATPgrasp_ST PF14397.6 gi|15921865|ref|NP_377534.1| - 0.00094 18.5 0.0 0.061 12.6 0.1 2.9 2 1 0 2 2 2 1 Sugar-transfer associated ATP-grasp ATP-grasp_3 PF02655.14 gi|15921865|ref|NP_377534.1| - 0.0037 17.3 0.1 0.29 11.2 0.0 2.3 2 0 0 2 2 2 1 ATP-grasp domain GSH-S_ATP PF02955.16 gi|15921865|ref|NP_377534.1| - 0.049 13.0 0.1 0.12 11.8 0.1 1.6 1 0 0 1 1 1 0 Prokaryotic glutathione synthetase, ATP-grasp domain ATP-grasp PF02222.22 gi|15921865|ref|NP_377534.1| - 0.15 11.7 0.0 0.25 10.9 0.0 1.3 1 0 0 1 1 1 0 ATP-grasp domain Transglut_core PF01841.19 gi|15921866|ref|NP_377535.1| - 4.3e-23 81.9 0.0 6.7e-23 81.3 0.0 1.3 1 0 0 1 1 1 1 Transglutaminase-like superfamily Bact_transglu_N PF08379.10 gi|15921866|ref|NP_377535.1| - 2.3e-11 44.5 0.2 3.7e-11 43.8 0.2 1.4 1 0 0 1 1 1 1 Bacterial transglutaminase-like N-terminal region DUF553 PF04473.12 gi|15921866|ref|NP_377535.1| - 1.7e-08 34.1 0.1 4.3e-08 32.8 0.1 1.8 1 1 0 1 1 1 1 Transglutaminase-like domain Transglut_core3 PF13471.6 gi|15921866|ref|NP_377535.1| - 7.4e-06 25.9 0.0 1.1e-05 25.3 0.0 1.2 1 0 0 1 1 1 1 Transglutaminase-like superfamily Peptidase_C93 PF06035.11 gi|15921866|ref|NP_377535.1| - 0.011 15.5 0.0 0.017 14.9 0.0 1.2 1 0 0 1 1 1 0 Bacterial transglutaminase-like cysteine proteinase BTLCP Alpha-E PF04168.12 gi|15921867|ref|NP_377536.1| - 1.8e-05 24.6 0.2 2.9e-05 24.0 0.1 1.4 1 1 0 1 1 1 1 A predicted alpha-helical domain with a conserved ER motif. Ald_Xan_dh_C2 PF02738.18 gi|15921868|ref|NP_377537.1| - 3.8e-92 309.5 0.0 5.1e-92 309.1 0.0 1.2 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 gi|15921868|ref|NP_377537.1| - 2.8e-26 92.0 0.0 4.8e-26 91.3 0.0 1.4 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain MazE_antitoxin PF04014.18 gi|15921869|ref|NP_377538.1| - 5.8e-12 45.2 0.2 7.6e-12 44.9 0.2 1.3 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin TOBE PF03459.17 gi|15921869|ref|NP_377538.1| - 0.019 15.3 0.0 0.046 14.0 0.0 1.6 1 1 0 1 1 1 0 TOBE domain DUF1189 PF06691.11 gi|15921869|ref|NP_377538.1| - 0.085 12.4 1.2 0.093 12.3 1.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF1189) DUF104 PF01954.16 gi|15921869|ref|NP_377538.1| - 1.2 9.7 5.5 4.9 7.7 5.2 2.2 1 1 0 1 1 1 0 Protein of unknown function DUF104 PIN PF01850.21 gi|15921870|ref|NP_377539.1| - 1.6e-10 41.5 1.7 1.9e-10 41.3 1.7 1.1 1 0 0 1 1 1 1 PIN domain NTP_transf_2 PF01909.23 gi|15921871|ref|NP_377540.1| - 5.6e-11 42.6 1.0 7.4e-11 42.2 1.0 1.2 1 0 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|15921871|ref|NP_377540.1| - 2.7e-09 37.0 0.5 3.9e-09 36.5 0.5 1.3 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase DNA_pol_B_palm PF14792.6 gi|15921871|ref|NP_377540.1| - 0.055 13.7 0.0 0.19 11.9 0.0 1.7 1 1 1 2 2 2 0 DNA polymerase beta palm DUF294 PF03445.13 gi|15921871|ref|NP_377540.1| - 0.062 13.1 0.0 0.071 12.9 0.0 1.2 1 0 0 1 1 1 0 Putative nucleotidyltransferase DUF294 HEPN PF05168.14 gi|15921872|ref|NP_377541.1| - 4.9e-32 110.5 0.9 5.8e-32 110.3 0.9 1.0 1 0 0 1 1 1 1 HEPN domain DUF2122 PF09895.9 gi|15921872|ref|NP_377541.1| - 0.014 15.7 0.1 0.033 14.6 0.1 1.6 1 1 0 1 1 1 0 RecB-family nuclease (DUF2122) DUF4145 PF13643.6 gi|15921872|ref|NP_377541.1| - 0.14 12.3 0.0 0.63 10.2 0.0 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF4145) EB1 PF03271.17 gi|15921873|ref|NP_377542.1| - 0.024 14.9 0.2 0.04 14.1 0.2 1.4 1 0 0 1 1 1 0 EB1-like C-terminal motif E2F_TDP PF02319.20 gi|15921873|ref|NP_377542.1| - 0.046 13.8 0.2 0.25 11.4 0.1 2.0 2 0 0 2 2 2 0 E2F/DP family winged-helix DNA-binding domain AAA_15 PF13175.6 gi|15921874|ref|NP_377543.1| - 1.4e-28 100.7 13.8 1.5e-26 94.0 13.8 2.5 1 1 0 1 1 1 1 AAA ATPase domain AAA_21 PF13304.6 gi|15921874|ref|NP_377543.1| - 4e-22 79.4 4.2 2.4e-21 76.8 4.2 2.0 1 1 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system DUF2813 PF11398.8 gi|15921874|ref|NP_377543.1| - 1.3e-05 24.7 0.6 0.0023 17.2 0.3 2.4 2 1 0 2 2 2 2 Protein of unknown function (DUF2813) AAA_27 PF13514.6 gi|15921874|ref|NP_377543.1| - 0.0003 20.5 0.0 0.0007 19.2 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_23 PF13476.6 gi|15921874|ref|NP_377543.1| - 0.00036 21.1 4.7 0.00036 21.1 4.7 1.7 2 0 0 2 2 2 1 AAA domain SMC_N PF02463.19 gi|15921874|ref|NP_377543.1| - 0.0076 15.7 0.0 0.93 8.9 0.0 2.3 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain ABC_tran PF00005.27 gi|15921875|ref|NP_377544.1| - 4.1e-33 114.8 0.0 7.1e-33 114.0 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|15921875|ref|NP_377544.1| - 2.2e-12 47.4 3.2 7.4e-07 29.3 0.4 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|15921875|ref|NP_377544.1| - 0.00082 18.9 1.0 0.014 14.9 1.0 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|15921875|ref|NP_377544.1| - 0.002 17.9 0.6 0.11 12.2 0.0 2.3 1 1 1 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 gi|15921875|ref|NP_377544.1| - 0.0024 17.6 0.0 0.0043 16.8 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain MukB PF04310.12 gi|15921875|ref|NP_377544.1| - 0.0094 15.8 0.0 0.024 14.5 0.0 1.6 1 1 0 1 1 1 1 MukB N-terminal Fer4_NifH PF00142.18 gi|15921875|ref|NP_377544.1| - 0.018 14.5 0.0 0.042 13.3 0.0 1.6 2 0 0 2 2 2 0 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family Mg_chelatase PF01078.21 gi|15921875|ref|NP_377544.1| - 0.02 14.3 0.1 1.3 8.4 0.0 2.2 2 0 0 2 2 2 0 Magnesium chelatase, subunit ChlI DUF87 PF01935.17 gi|15921875|ref|NP_377544.1| - 0.025 14.7 0.2 0.073 13.2 0.0 1.8 2 1 0 2 2 2 0 Helicase HerA, central domain AAA_27 PF13514.6 gi|15921875|ref|NP_377544.1| - 0.033 13.8 0.0 0.055 13.1 0.0 1.3 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|15921875|ref|NP_377544.1| - 0.048 13.4 0.0 0.091 12.5 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_23 PF13476.6 gi|15921875|ref|NP_377544.1| - 0.064 13.7 0.5 0.1 13.1 0.1 1.5 2 0 0 2 2 2 0 AAA domain AAA_10 PF12846.7 gi|15921875|ref|NP_377544.1| - 0.064 12.2 0.4 0.47 9.3 0.0 2.1 1 1 0 2 2 2 0 AAA-like domain SRP54 PF00448.22 gi|15921875|ref|NP_377544.1| - 0.066 12.8 0.0 0.18 11.4 0.0 1.7 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain AAA_16 PF13191.6 gi|15921875|ref|NP_377544.1| - 0.1 13.0 0.0 0.15 12.4 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain MeaB PF03308.16 gi|15921875|ref|NP_377544.1| - 0.12 11.3 0.1 0.22 10.5 0.1 1.3 1 0 0 1 1 1 0 Methylmalonyl Co-A mutase-associated GTPase MeaB AAA_22 PF13401.6 gi|15921875|ref|NP_377544.1| - 0.16 12.2 0.4 0.52 10.6 0.4 1.9 1 1 0 1 1 1 0 AAA domain Pilin_GH PF16734.5 gi|15921877|ref|NP_377546.1| - 0.029 14.7 0.1 0.068 13.5 0.1 1.6 1 0 0 1 1 1 0 Type IV pilin-like G and H, putative Ibs_toxin PF13956.6 gi|15921877|ref|NP_377546.1| - 0.05 13.6 4.4 0.15 12.1 4.4 1.8 1 0 0 1 1 1 0 Toxin Ibs, type I toxin-antitoxin system Wzz PF02706.15 gi|15921877|ref|NP_377546.1| - 0.068 13.5 0.9 0.15 12.4 0.8 1.8 1 1 0 1 1 1 0 Chain length determinant protein Amidohydro_1 PF01979.20 gi|15921878|ref|NP_377547.1| - 6.3e-48 163.9 0.0 7.8e-48 163.5 0.0 1.0 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|15921878|ref|NP_377547.1| - 1.9e-16 60.6 0.0 4.2e-12 46.3 0.0 2.2 2 0 0 2 2 2 2 Amidohydrolase family AAA_lid_3 PF17862.1 gi|15921878|ref|NP_377547.1| - 0.12 12.2 0.4 11 5.9 0.0 2.6 2 0 0 2 2 2 0 AAA+ lid domain DUF805 PF05656.14 gi|15921879|ref|NP_377548.1| - 0.13 12.7 0.0 0.16 12.4 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF805) ABC_tran PF00005.27 gi|15921880|ref|NP_377549.1| - 4.5e-33 114.7 0.0 6.5e-33 114.1 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|15921880|ref|NP_377549.1| - 8.8e-13 48.7 1.6 5.7e-09 36.2 0.1 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|15921880|ref|NP_377549.1| - 1.3e-05 25.1 0.8 0.023 14.4 0.0 2.7 2 1 1 3 3 3 2 AAA ATPase domain SMC_N PF02463.19 gi|15921880|ref|NP_377549.1| - 0.00035 20.1 0.1 0.6 9.5 0.0 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_14 PF13173.6 gi|15921880|ref|NP_377549.1| - 0.00074 19.6 0.2 0.0085 16.1 0.0 2.3 1 1 0 2 2 2 1 AAA domain AAA PF00004.29 gi|15921880|ref|NP_377549.1| - 0.0012 19.3 0.2 0.0028 18.1 0.1 1.9 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) IstB_IS21 PF01695.17 gi|15921880|ref|NP_377549.1| - 0.0012 18.6 0.0 0.61 9.8 0.0 2.4 2 1 0 2 2 2 2 IstB-like ATP binding protein AAA_16 PF13191.6 gi|15921880|ref|NP_377549.1| - 0.0017 18.8 0.0 0.0025 18.2 0.0 1.5 1 1 0 1 1 1 1 AAA ATPase domain ATPase_2 PF01637.18 gi|15921880|ref|NP_377549.1| - 0.0019 18.2 0.1 0.0057 16.6 0.1 1.7 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_5 PF07728.14 gi|15921880|ref|NP_377549.1| - 0.0031 17.5 0.1 0.0087 16.1 0.1 2.0 1 1 0 1 1 1 1 AAA domain (dynein-related subfamily) RsgA_GTPase PF03193.16 gi|15921880|ref|NP_377549.1| - 0.0032 17.4 0.1 0.0074 16.2 0.0 1.6 2 0 0 2 2 2 1 RsgA GTPase NB-ARC PF00931.22 gi|15921880|ref|NP_377549.1| - 0.0035 16.5 0.8 0.0074 15.5 0.4 2.0 1 1 0 1 1 1 1 NB-ARC domain TsaE PF02367.17 gi|15921880|ref|NP_377549.1| - 0.0087 16.1 0.0 0.016 15.2 0.0 1.4 1 0 0 1 1 1 1 Threonylcarbamoyl adenosine biosynthesis protein TsaE Roc PF08477.13 gi|15921880|ref|NP_377549.1| - 0.0088 16.3 0.1 0.051 13.8 0.0 2.2 2 1 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase AAA_29 PF13555.6 gi|15921880|ref|NP_377549.1| - 0.011 15.5 0.0 0.022 14.5 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|15921880|ref|NP_377549.1| - 0.014 15.9 2.2 0.039 14.5 2.2 2.0 1 1 0 1 1 1 0 AAA domain DUF4162 PF13732.6 gi|15921880|ref|NP_377549.1| - 0.014 16.1 0.1 0.056 14.2 0.1 2.1 2 0 0 2 2 1 0 Domain of unknown function (DUF4162) NTPase_1 PF03266.15 gi|15921880|ref|NP_377549.1| - 0.016 15.1 0.4 0.4 10.6 0.1 2.4 2 0 0 2 2 2 0 NTPase MukB PF04310.12 gi|15921880|ref|NP_377549.1| - 0.018 14.9 0.0 0.037 13.8 0.0 1.5 1 0 0 1 1 1 0 MukB N-terminal AAA_30 PF13604.6 gi|15921880|ref|NP_377549.1| - 0.036 13.8 0.0 0.059 13.1 0.0 1.4 1 1 0 1 1 1 0 AAA domain AAA_7 PF12775.7 gi|15921880|ref|NP_377549.1| - 0.044 13.3 0.0 0.07 12.6 0.0 1.2 1 0 0 1 1 1 0 P-loop containing dynein motor region NACHT PF05729.12 gi|15921880|ref|NP_377549.1| - 0.048 13.6 0.1 0.12 12.2 0.0 1.7 2 0 0 2 2 2 0 NACHT domain AAA_33 PF13671.6 gi|15921880|ref|NP_377549.1| - 0.051 13.7 0.0 0.12 12.6 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_25 PF13481.6 gi|15921880|ref|NP_377549.1| - 0.088 12.4 0.0 0.24 11.0 0.0 1.7 2 0 0 2 2 2 0 AAA domain AAA_22 PF13401.6 gi|15921880|ref|NP_377549.1| - 0.094 13.0 0.7 0.71 10.1 0.0 2.4 2 1 0 2 2 2 0 AAA domain SbcCD_C PF13558.6 gi|15921880|ref|NP_377549.1| - 0.14 12.4 0.0 0.53 10.6 0.0 2.0 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA_19 PF13245.6 gi|15921880|ref|NP_377549.1| - 0.16 12.3 0.0 0.25 11.7 0.0 1.5 1 1 0 1 1 1 0 AAA domain ABC2_membrane PF01061.24 gi|15921881|ref|NP_377550.1| - 1.3e-11 44.4 32.7 1.9e-11 43.8 32.7 1.3 1 0 0 1 1 1 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|15921881|ref|NP_377550.1| - 2.2e-08 33.6 31.3 2.2e-08 33.6 31.3 1.9 1 1 1 2 2 2 1 ABC-2 family transporter protein HTH_24 PF13412.6 gi|15921882|ref|NP_377551.1| - 4.6e-06 26.1 0.0 1.2e-05 24.8 0.0 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|15921882|ref|NP_377551.1| - 5e-06 26.3 0.0 1.2e-05 25.1 0.0 1.5 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_34 PF13601.6 gi|15921882|ref|NP_377551.1| - 1.8e-05 24.8 0.0 5.1e-05 23.4 0.0 1.8 1 0 0 1 1 1 1 Winged helix DNA-binding domain Fe_dep_repress PF01325.19 gi|15921882|ref|NP_377551.1| - 0.00097 19.3 0.0 0.002 18.3 0.0 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain TrmB PF01978.19 gi|15921882|ref|NP_377551.1| - 0.0023 17.8 0.0 0.0046 16.8 0.0 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|15921882|ref|NP_377551.1| - 0.0026 17.7 0.0 0.0055 16.6 0.0 1.5 1 0 0 1 1 1 1 MarR family MarR_2 PF12802.7 gi|15921882|ref|NP_377551.1| - 0.013 15.4 0.0 0.024 14.5 0.0 1.4 1 0 0 1 1 1 0 MarR family HTH_36 PF13730.6 gi|15921882|ref|NP_377551.1| - 0.02 14.8 0.0 0.042 13.8 0.0 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_11 PF08279.12 gi|15921882|ref|NP_377551.1| - 0.092 12.7 0.0 0.21 11.6 0.0 1.6 1 0 0 1 1 1 0 HTH domain GTF2I PF02946.14 gi|15921882|ref|NP_377551.1| - 0.094 12.8 0.0 0.2 11.7 0.0 1.5 1 0 0 1 1 1 0 GTF2I-like repeat TBPIP PF07106.13 gi|15921882|ref|NP_377551.1| - 0.099 12.6 0.5 0.66 10.0 0.0 2.3 3 0 0 3 3 3 0 TBPIP/Hop2 winged helix domain HTH_27 PF13463.6 gi|15921882|ref|NP_377551.1| - 0.1 13.1 0.0 0.36 11.3 0.0 1.9 2 0 0 2 2 2 0 Winged helix DNA-binding domain HMD PF03201.16 gi|15921882|ref|NP_377551.1| - 0.12 12.6 0.1 0.35 11.1 0.0 1.7 2 0 0 2 2 2 0 H2-forming N5,N10-methylene-tetrahydromethanopterin dehydrogenase Lactamase_B PF00753.27 gi|15921883|ref|NP_377552.1| - 9.5e-22 78.0 0.1 1.3e-21 77.6 0.1 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|15921883|ref|NP_377552.1| - 1.1e-05 25.0 0.0 2e-05 24.2 0.0 1.4 1 1 0 1 1 1 1 Beta-lactamase superfamily domain DUF1059 PF06348.11 gi|15921884|ref|NP_377553.1| - 8.5e-49 163.6 0.0 1.5e-23 82.8 0.0 2.0 2 0 0 2 2 2 2 Protein of unknown function (DUF1059) Arc PF03869.14 gi|15921884|ref|NP_377553.1| - 0.041 13.7 0.0 0.08 12.8 0.0 1.5 1 0 0 1 1 1 0 Arc-like DNA binding domain Como_SCP PF02248.16 gi|15921884|ref|NP_377553.1| - 0.065 12.8 0.0 3.8 7.1 0.0 2.0 1 1 1 2 2 2 0 Small coat protein RTTN_N PF14726.6 gi|15921884|ref|NP_377553.1| - 0.1 13.4 0.1 3 8.7 0.0 2.0 2 0 0 2 2 2 0 Rotatin, an armadillo repeat protein, centriole functioning MIase PF02426.16 gi|15921884|ref|NP_377553.1| - 0.12 12.6 0.0 0.81 9.9 0.0 2.0 2 0 0 2 2 2 0 Muconolactone delta-isomerase HTH_24 PF13412.6 gi|15921886|ref|NP_377555.1| - 2.5e-25 87.7 0.5 1.9e-14 52.9 0.0 2.2 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|15921886|ref|NP_377555.1| - 5.8e-17 61.2 0.1 2e-08 33.9 0.0 2.3 2 0 0 2 2 2 2 AsnC-type helix-turn-helix domain MarR_2 PF12802.7 gi|15921886|ref|NP_377555.1| - 1.1e-08 34.8 0.0 0.00051 19.9 0.0 2.2 2 0 0 2 2 2 2 MarR family HTH_Crp_2 PF13545.6 gi|15921886|ref|NP_377555.1| - 4.7e-08 32.9 0.0 6.8e-05 22.8 0.0 2.3 2 0 0 2 2 2 2 Crp-like helix-turn-helix domain MarR PF01047.22 gi|15921886|ref|NP_377555.1| - 2.8e-06 27.2 0.0 0.043 13.8 0.0 2.3 2 0 0 2 2 2 2 MarR family HTH_5 PF01022.20 gi|15921886|ref|NP_377555.1| - 3.5e-06 26.8 0.0 0.13 12.1 0.1 2.4 2 0 0 2 2 2 2 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|15921886|ref|NP_377555.1| - 7e-06 26.0 0.0 0.069 13.2 0.0 2.3 2 0 0 2 2 2 2 Helix-turn-helix domain HTH_11 PF08279.12 gi|15921886|ref|NP_377555.1| - 1.3e-05 25.0 0.0 0.00075 19.4 0.0 2.6 3 0 0 3 3 3 1 HTH domain Rrf2 PF02082.20 gi|15921886|ref|NP_377555.1| - 0.0023 18.2 0.0 0.073 13.4 0.0 2.3 2 0 0 2 2 2 1 Transcriptional regulator HTH_23 PF13384.6 gi|15921886|ref|NP_377555.1| - 0.0025 17.6 0.0 1.6 8.6 0.0 2.4 2 0 0 2 2 2 2 Homeodomain-like domain Sigma70_r4_2 PF08281.12 gi|15921886|ref|NP_377555.1| - 0.0036 17.0 0.0 2.7 7.7 0.0 2.5 2 0 0 2 2 2 2 Sigma-70, region 4 HTH_28 PF13518.6 gi|15921886|ref|NP_377555.1| - 0.0046 17.1 0.0 0.21 11.8 0.0 2.3 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_10 PF04967.12 gi|15921886|ref|NP_377555.1| - 0.0046 16.7 0.0 1.1 9.1 0.0 2.4 2 0 0 2 2 2 1 HTH DNA binding domain LexA_DNA_bind PF01726.16 gi|15921886|ref|NP_377555.1| - 0.015 15.1 0.0 2.6 7.9 0.0 2.3 2 0 0 2 2 2 0 LexA DNA binding domain Fe_dep_repress PF01325.19 gi|15921886|ref|NP_377555.1| - 0.024 14.8 0.0 9.7 6.5 0.0 2.4 2 0 0 2 2 2 0 Iron dependent repressor, N-terminal DNA binding domain HTH_Mga PF08280.11 gi|15921886|ref|NP_377555.1| - 0.049 13.7 0.0 2.4 8.3 0.0 2.4 2 0 0 2 2 2 0 M protein trans-acting positive regulator (MGA) HTH domain Ribosomal_S25 PF03297.15 gi|15921886|ref|NP_377555.1| - 0.065 13.4 0.0 0.12 12.6 0.0 1.4 1 0 0 1 1 1 0 S25 ribosomal protein HTH_38 PF13936.6 gi|15921886|ref|NP_377555.1| - 0.088 12.6 0.1 4.4 7.2 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain TrmB PF01978.19 gi|15921886|ref|NP_377555.1| - 0.096 12.6 0.0 5.8 6.9 0.0 2.3 2 0 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB DUF5557 PF17712.1 gi|15921887|ref|NP_377556.1| - 0.11 12.4 0.0 0.26 11.3 0.0 1.6 1 0 0 1 1 1 0 Family of unknown function (DUF5557) DUF929 PF06053.11 gi|15921888|ref|NP_377557.1| - 3.6e-62 209.9 15.7 5.1e-62 209.4 15.7 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF929) Thioredoxin_2 PF13098.6 gi|15921888|ref|NP_377557.1| - 0.018 15.4 1.2 0.093 13.2 0.0 2.4 3 0 0 3 3 3 0 Thioredoxin-like domain AhpC-TSA PF00578.21 gi|15921888|ref|NP_377557.1| - 0.057 13.3 0.0 0.095 12.6 0.0 1.3 1 0 0 1 1 1 0 AhpC/TSA family Thioredoxin_7 PF13899.6 gi|15921888|ref|NP_377557.1| - 0.061 13.5 0.0 0.18 12.0 0.0 1.7 1 0 0 1 1 1 0 Thioredoxin-like Redoxin PF08534.10 gi|15921888|ref|NP_377557.1| - 0.18 11.5 0.0 0.32 10.7 0.0 1.3 1 0 0 1 1 1 0 Redoxin Sporozoite_P67 PF05642.11 gi|15921889|ref|NP_377558.1| - 0.066 11.3 5.8 2 6.4 4.5 2.1 2 0 0 2 2 2 0 Sporozoite P67 surface antigen DUF677 PF05055.12 gi|15921889|ref|NP_377558.1| - 0.96 8.3 6.8 1.3 7.8 6.8 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF677) DUF4179 PF13786.6 gi|15921889|ref|NP_377558.1| - 1.6 9.3 6.0 4.3 7.9 6.0 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4179) Mucin PF01456.17 gi|15921889|ref|NP_377558.1| - 5.3 7.0 25.1 13 5.8 25.1 1.6 1 0 0 1 1 1 0 Mucin-like glycoprotein Fer4_10 PF13237.6 gi|15921890|ref|NP_377559.1| - 1.7e-07 31.3 6.1 2.8e-07 30.5 6.1 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15921890|ref|NP_377559.1| - 5.6e-05 23.6 15.5 0.00045 20.8 9.4 2.4 2 1 2 4 4 3 3 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15921890|ref|NP_377559.1| - 0.00012 22.1 4.8 0.00034 20.7 4.8 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15921890|ref|NP_377559.1| - 0.0011 19.8 1.9 0.49 11.4 0.0 2.5 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_6 PF12837.7 gi|15921890|ref|NP_377559.1| - 0.0053 16.8 9.3 0.15 12.2 0.4 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_11 PF13247.6 gi|15921890|ref|NP_377559.1| - 0.01 16.0 1.4 0.021 14.9 1.4 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|15921890|ref|NP_377559.1| - 0.016 15.4 1.9 0.038 14.2 1.9 1.5 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15921890|ref|NP_377559.1| - 0.029 14.5 4.8 0.073 13.2 4.8 1.7 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_20 PF14691.6 gi|15921890|ref|NP_377559.1| - 0.094 12.5 6.0 0.074 12.8 2.6 2.1 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4 PF00037.27 gi|15921890|ref|NP_377559.1| - 0.32 10.9 12.4 0.16 11.9 0.9 3.1 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|15921890|ref|NP_377559.1| - 0.5 10.9 7.9 2.4 8.7 0.4 2.5 1 1 2 3 3 3 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|15921890|ref|NP_377559.1| - 1.8 9.7 11.9 9.6 7.4 0.6 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_8 PF13183.6 gi|15921890|ref|NP_377559.1| - 2.6 8.5 13.1 2.6 8.5 0.1 3.1 3 1 2 5 5 5 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15921890|ref|NP_377559.1| - 2.7 8.7 9.4 3.1 8.5 2.5 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.7 gi|15921890|ref|NP_377559.1| - 8.1 6.8 14.6 2.3 8.5 3.4 3.0 3 0 0 3 3 2 0 4Fe-4S binding domain DUF4898 PF16239.5 gi|15921891|ref|NP_377560.1| - 4.6e-13 48.9 7.4 6.5e-13 48.4 6.9 1.4 1 1 1 2 2 2 1 Domain of unknown function (DUF4898) DUF4488 PF14869.6 gi|15921891|ref|NP_377560.1| - 0.03 14.2 0.1 0.033 14.1 0.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4488) HTH_10 PF04967.12 gi|15921893|ref|NP_377562.1| - 3.6e-21 74.7 0.1 6.4e-21 73.9 0.1 1.4 1 0 0 1 1 1 1 HTH DNA binding domain Sigma70_r4 PF04545.16 gi|15921893|ref|NP_377562.1| - 1.6e-08 33.9 0.3 2.8e-08 33.2 0.3 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_24 PF13412.6 gi|15921893|ref|NP_377562.1| - 0.00011 21.6 0.1 0.0003 20.3 0.1 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding Fe_dep_repress PF01325.19 gi|15921893|ref|NP_377562.1| - 0.0033 17.6 0.1 0.036 14.3 0.0 2.3 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain MarR PF01047.22 gi|15921893|ref|NP_377562.1| - 0.0069 16.3 0.1 0.023 14.6 0.1 1.9 1 1 0 1 1 1 1 MarR family HTH_37 PF13744.6 gi|15921893|ref|NP_377562.1| - 0.0099 15.8 0.0 0.025 14.5 0.0 1.7 1 1 0 1 1 1 1 Helix-turn-helix domain DUF4162 PF13732.6 gi|15921893|ref|NP_377562.1| - 0.026 15.2 0.4 0.6 10.9 0.1 2.6 2 1 1 3 3 3 0 Domain of unknown function (DUF4162) HTH_26 PF13443.6 gi|15921893|ref|NP_377562.1| - 0.035 14.5 0.0 0.12 12.8 0.0 1.9 2 0 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain HTH_Tnp_ISL3 PF13542.6 gi|15921893|ref|NP_377562.1| - 0.04 13.3 0.0 0.15 11.5 0.0 1.9 2 0 0 2 2 2 0 Helix-turn-helix domain of transposase family ISL3 HTH_11 PF08279.12 gi|15921893|ref|NP_377562.1| - 0.066 13.2 0.2 0.71 9.9 0.1 2.5 1 1 1 2 2 2 0 HTH domain HTH_23 PF13384.6 gi|15921893|ref|NP_377562.1| - 0.073 12.9 0.0 0.15 11.9 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain UPF0122 PF04297.14 gi|15921893|ref|NP_377562.1| - 0.079 13.2 0.1 0.17 12.1 0.1 1.6 1 0 0 1 1 1 0 Putative helix-turn-helix protein, YlxM / p13 like Sigma70_r4_2 PF08281.12 gi|15921893|ref|NP_377562.1| - 0.093 12.4 0.6 9.8 6.0 0.1 2.4 2 0 0 2 2 2 0 Sigma-70, region 4 DUF3673 PF12425.8 gi|15921893|ref|NP_377562.1| - 0.099 12.6 0.0 0.18 11.8 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3673) DUF488 PF04343.13 gi|15921894|ref|NP_377563.1| - 3.2e-27 95.5 0.0 3.8e-27 95.3 0.0 1.1 1 0 0 1 1 1 1 Protein of unknown function, DUF488 Hemerythrin PF01814.23 gi|15921895|ref|NP_377564.1| - 0.00015 22.4 0.0 0.00025 21.7 0.0 1.4 1 1 0 1 1 1 1 Hemerythrin HHE cation binding domain Far-17a_AIG1 PF04750.14 gi|15921895|ref|NP_377564.1| - 0.13 11.5 0.0 0.17 11.1 0.0 1.2 1 0 0 1 1 1 0 FAR-17a/AIG1-like protein Amidohydro_2 PF04909.14 gi|15921896|ref|NP_377565.1| - 1.9e-27 96.8 0.0 3e-27 96.2 0.0 1.3 1 1 0 1 1 1 1 Amidohydrolase TatD_DNase PF01026.21 gi|15921896|ref|NP_377565.1| - 0.00043 19.8 0.0 0.0008 18.9 0.0 1.4 1 1 0 1 1 1 1 TatD related DNase DDE_Tnp_1 PF01609.21 gi|15921898|ref|NP_377567.1| - 0.02 14.5 0.0 0.023 14.3 0.0 1.1 1 0 0 1 1 1 0 Transposase DDE domain DUF824 PF05688.11 gi|15921900|ref|NP_377569.1| - 0.1 12.4 2.1 6.3 6.7 0.0 3.6 4 1 0 4 4 4 0 Salmonella repeat of unknown function (DUF824) COX14 PF14880.6 gi|15921901|ref|NP_377570.1| - 0.0023 17.8 0.1 0.0055 16.5 0.1 1.6 1 0 0 1 1 1 1 Cytochrome oxidase c assembly PDDEXK_10 PF07788.11 gi|15921902|ref|NP_377571.1| - 1.1e-35 121.4 2.8 1.1e-35 121.4 2.8 2.3 2 0 0 2 2 2 1 PD-(D/E)XK nuclease superfamily DUF3782 PF12644.7 gi|15921902|ref|NP_377571.1| - 3.1e-23 81.7 13.1 6.8e-21 74.2 13.1 3.2 1 1 0 1 1 1 1 Protein of unknown function (DUF3782) ScsC_N PF18312.1 gi|15921902|ref|NP_377571.1| - 0.0022 17.7 0.7 0.15 11.9 0.2 3.1 2 0 0 2 2 2 1 Copper resistance protein ScsC N-terminal domain Erp_C PF06780.11 gi|15921902|ref|NP_377571.1| - 0.0036 17.3 11.8 0.015 15.3 11.8 2.0 1 1 0 1 1 1 1 Erp protein C-terminus Peptidase_M2 PF01401.18 gi|15921902|ref|NP_377571.1| - 0.011 14.4 3.5 0.013 14.1 3.5 1.1 1 0 0 1 1 1 0 Angiotensin-converting enzyme MutS_III PF05192.18 gi|15921902|ref|NP_377571.1| - 0.016 15.5 1.8 0.019 15.2 1.8 1.2 1 0 0 1 1 1 0 MutS domain III NIR_SIR PF01077.22 gi|15921902|ref|NP_377571.1| - 0.038 13.5 0.7 10 5.6 0.0 2.8 3 1 0 3 3 3 0 Nitrite and sulphite reductase 4Fe-4S domain PCRF PF03462.18 gi|15921902|ref|NP_377571.1| - 0.052 13.4 9.1 0.091 12.6 9.1 1.3 1 0 0 1 1 1 0 PCRF domain CorA PF01544.18 gi|15921902|ref|NP_377571.1| - 0.23 10.8 9.5 1.5 8.1 9.7 1.9 1 1 0 1 1 1 0 CorA-like Mg2+ transporter protein T6SS_VipA PF05591.12 gi|15921902|ref|NP_377571.1| - 0.47 10.3 9.7 2.5 7.9 3.3 2.7 1 1 1 2 2 2 0 Type VI secretion system, VipA, VC_A0107 or Hcp2 EFhand_Ca_insen PF08726.10 gi|15921902|ref|NP_377571.1| - 0.48 10.5 4.2 0.58 10.3 2.0 2.1 1 1 1 2 2 2 0 Ca2+ insensitive EF hand RRP36 PF06102.12 gi|15921902|ref|NP_377571.1| - 0.81 9.6 11.9 1.6 8.6 11.9 1.5 1 0 0 1 1 1 0 rRNA biogenesis protein RRP36 Diphtheria_T PF02764.14 gi|15921902|ref|NP_377571.1| - 5 7.1 6.6 15 5.5 1.3 2.1 1 1 1 2 2 2 0 Diphtheria toxin, T domain MCPVI PF02993.14 gi|15921902|ref|NP_377571.1| - 6.1 6.6 7.6 7.1 6.4 3.8 2.0 1 1 1 2 2 2 0 Minor capsid protein VI TMEM240 PF15207.6 gi|15921903|ref|NP_377572.1| - 0.67 9.6 9.7 0.9 9.2 1.7 2.2 1 1 1 2 2 2 0 TMEM240 family Gaa1 PF04114.14 gi|15921903|ref|NP_377572.1| - 2.8 6.9 16.9 3.1 6.7 16.9 1.0 1 0 0 1 1 1 0 Gaa1-like, GPI transamidase component HTH_24 PF13412.6 gi|15921904|ref|NP_377573.1| - 2.1e-06 27.2 0.2 3.2e-06 26.6 0.2 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_5 PF01022.20 gi|15921904|ref|NP_377573.1| - 7.9e-06 25.6 0.0 1.4e-05 24.8 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_34 PF13601.6 gi|15921904|ref|NP_377573.1| - 0.00031 20.9 0.1 0.00062 19.9 0.1 1.5 1 1 0 1 1 1 1 Winged helix DNA-binding domain HTH_20 PF12840.7 gi|15921904|ref|NP_377573.1| - 0.00052 20.0 0.0 0.00075 19.5 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_45 PF14947.6 gi|15921904|ref|NP_377573.1| - 0.0014 18.6 2.5 0.0027 17.7 2.5 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DUF1495 PF07381.11 gi|15921904|ref|NP_377573.1| - 0.064 13.1 0.3 2.2 8.2 0.1 2.3 2 0 0 2 2 2 0 Winged helix DNA-binding domain (DUF1495) DUF973 PF06157.11 gi|15921905|ref|NP_377574.1| - 1.5e-89 300.1 51.1 1.8e-89 299.9 51.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF973) DUF996 PF06195.13 gi|15921905|ref|NP_377574.1| - 2.1e-05 24.8 31.8 9.1e-05 22.8 19.0 2.7 1 1 1 2 2 2 2 Protein of unknown function (DUF996) OFeT_1 PF16955.5 gi|15921906|ref|NP_377575.1| - 3.8e-109 363.2 20.7 4.3e-109 363.0 20.7 1.0 1 0 0 1 1 1 1 Ferrous iron uptake permease, iron-lead transporter DHHC PF01529.20 gi|15921906|ref|NP_377575.1| - 8.6 6.5 7.2 54 3.9 6.9 2.5 1 1 1 2 2 2 0 DHHC palmitoyltransferase AA_permease_2 PF13520.6 gi|15921907|ref|NP_377576.1| - 6.3e-23 81.3 59.7 8.2e-23 80.9 59.7 1.1 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|15921907|ref|NP_377576.1| - 2.9e-11 42.7 48.9 2.9e-11 42.7 48.9 1.5 1 1 0 1 1 1 1 Amino acid permease UPF0126 PF03458.13 gi|15921908|ref|NP_377577.1| - 4.8e-44 148.1 13.4 2.1e-23 82.0 4.6 2.2 2 0 0 2 2 2 2 UPF0126 domain EamA PF00892.20 gi|15921909|ref|NP_377578.1| - 4.7e-30 104.5 39.5 1.7e-17 63.9 19.9 2.1 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 gi|15921909|ref|NP_377578.1| - 0.00047 19.6 21.7 0.0038 16.6 19.6 2.4 1 1 1 2 2 2 1 Triose-phosphate Transporter family DUF2953 PF11167.8 gi|15921909|ref|NP_377578.1| - 3.3 7.9 6.4 9.1 6.5 0.4 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF2953) HTH_24 PF13412.6 gi|15921912|ref|NP_377581.1| - 6.4e-23 80.1 6.8 6.7e-13 48.0 0.3 2.4 2 0 0 2 2 2 2 Winged helix-turn-helix DNA-binding HTH_AsnC-type PF13404.6 gi|15921912|ref|NP_377581.1| - 4.2e-16 58.5 0.0 1e-09 38.1 0.0 2.3 2 0 0 2 2 2 2 AsnC-type helix-turn-helix domain TrmB PF01978.19 gi|15921912|ref|NP_377581.1| - 4.3e-07 29.7 0.1 0.00012 21.9 0.0 2.5 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.20 gi|15921912|ref|NP_377581.1| - 1.6e-06 27.8 0.2 0.00044 20.0 0.0 2.4 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family MarR PF01047.22 gi|15921912|ref|NP_377581.1| - 2e-05 24.4 0.3 0.2 11.6 0.1 2.4 2 0 0 2 2 2 2 MarR family MarR_2 PF12802.7 gi|15921912|ref|NP_377581.1| - 2.9e-05 23.8 0.0 0.11 12.4 0.0 2.3 2 0 0 2 2 2 2 MarR family HTH_7 PF02796.15 gi|15921912|ref|NP_377581.1| - 5.4e-05 23.2 0.1 0.073 13.2 0.0 2.4 2 0 0 2 2 2 2 Helix-turn-helix domain of resolvase HTH_9 PF08221.11 gi|15921912|ref|NP_377581.1| - 6.8e-05 22.9 0.4 0.073 13.2 0.1 2.6 2 0 0 2 2 2 2 RNA polymerase III subunit RPC82 helix-turn-helix domain Rrf2 PF02082.20 gi|15921912|ref|NP_377581.1| - 0.00084 19.6 0.4 0.57 10.6 0.1 2.6 2 0 0 2 2 2 2 Transcriptional regulator IF2_N PF04760.15 gi|15921912|ref|NP_377581.1| - 0.0018 18.0 0.0 0.0057 16.4 0.0 1.8 1 0 0 1 1 1 1 Translation initiation factor IF-2, N-terminal region HTH_Mga PF08280.11 gi|15921912|ref|NP_377581.1| - 0.0019 18.2 0.9 0.036 14.1 0.1 2.4 2 0 0 2 2 2 1 M protein trans-acting positive regulator (MGA) HTH domain B-block_TFIIIC PF04182.12 gi|15921912|ref|NP_377581.1| - 0.0024 18.0 0.5 1.1 9.4 0.1 2.6 2 0 0 2 2 2 2 B-block binding subunit of TFIIIC HTH_Crp_2 PF13545.6 gi|15921912|ref|NP_377581.1| - 0.003 17.5 0.0 0.51 10.3 0.0 2.3 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain Mga PF05043.13 gi|15921912|ref|NP_377581.1| - 0.0075 16.8 0.7 4.9 7.8 0.0 2.9 2 1 1 3 3 3 1 Mga helix-turn-helix domain HTH_20 PF12840.7 gi|15921912|ref|NP_377581.1| - 0.01 15.9 0.0 6.4 6.9 0.0 2.3 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_11 PF08279.12 gi|15921912|ref|NP_377581.1| - 0.018 15.0 2.7 0.15 12.0 0.5 2.5 2 0 0 2 2 2 0 HTH domain TFIIE_alpha PF02002.17 gi|15921912|ref|NP_377581.1| - 0.58 10.0 6.2 4.4 7.2 0.2 2.7 3 0 0 3 3 3 0 TFIIE alpha subunit ResIII PF04851.15 gi|15921913|ref|NP_377582.1| - 1.3e-26 93.7 0.1 5.7e-25 88.3 0.0 2.3 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit Helicase_C PF00271.31 gi|15921913|ref|NP_377582.1| - 4.7e-18 65.5 1.2 1.8e-17 63.7 0.2 2.4 3 0 0 3 3 3 1 Helicase conserved C-terminal domain ERCC3_RAD25_C PF16203.5 gi|15921913|ref|NP_377582.1| - 1.1e-17 64.1 0.7 1.8e-17 63.4 0.7 1.4 1 0 0 1 1 1 1 ERCC3/RAD25/XPB C-terminal helicase DEAD PF00270.29 gi|15921913|ref|NP_377582.1| - 2e-10 40.7 0.2 1.5e-09 37.9 0.1 2.5 2 1 0 2 2 2 1 DEAD/DEAH box helicase XPB_DRD PF18458.1 gi|15921913|ref|NP_377582.1| - 3.5e-10 39.6 0.1 1e-09 38.1 0.1 1.9 1 0 0 1 1 1 1 Xeroderma pigmentosum group B helicase damage recognition domain SNF2_N PF00176.23 gi|15921913|ref|NP_377582.1| - 4.1e-08 32.3 0.3 1.8e-06 27.0 0.0 2.9 1 1 1 2 2 2 2 SNF2 family N-terminal domain Helicase_C_2 PF13307.6 gi|15921913|ref|NP_377582.1| - 6.3e-05 23.2 0.4 0.0088 16.2 0.1 3.1 3 1 0 3 3 3 1 Helicase C-terminal domain SWI2_SNF2 PF18766.1 gi|15921913|ref|NP_377582.1| - 0.0017 18.1 0.2 1.3 8.6 0.0 3.1 2 1 0 2 2 2 1 SWI2/SNF2 ATPase PK_C PF02887.16 gi|15921913|ref|NP_377582.1| - 0.064 13.5 0.0 0.52 10.6 0.0 2.2 2 0 0 2 2 2 0 Pyruvate kinase, alpha/beta domain YflT PF11181.8 gi|15921913|ref|NP_377582.1| - 0.076 13.5 1.1 0.56 10.7 0.2 2.4 2 0 0 2 2 2 0 Heat induced stress protein YflT AAA_30 PF13604.6 gi|15921913|ref|NP_377582.1| - 0.11 12.2 0.0 0.74 9.5 0.0 2.3 3 0 0 3 3 3 0 AAA domain AAA_19 PF13245.6 gi|15921913|ref|NP_377582.1| - 0.22 11.8 0.6 1.2 9.4 0.2 2.5 2 1 0 2 2 2 0 AAA domain DUF790 PF05626.11 gi|15921914|ref|NP_377583.1| - 4.8e-118 394.3 7.3 5.9e-118 394.0 7.3 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF790) Ribosomal_S25 PF03297.15 gi|15921914|ref|NP_377583.1| - 0.089 13.0 2.0 0.18 12.0 0.7 2.2 2 0 0 2 2 2 0 S25 ribosomal protein PK PF00224.21 gi|15921917|ref|NP_377586.1| - 2.5e-80 270.0 0.7 5.1e-80 269.0 0.7 1.5 1 1 0 1 1 1 1 Pyruvate kinase, barrel domain PK_C PF02887.16 gi|15921917|ref|NP_377586.1| - 5e-20 71.9 0.7 1.5e-19 70.4 0.2 2.1 2 0 0 2 2 2 1 Pyruvate kinase, alpha/beta domain HpcH_HpaI PF03328.14 gi|15921917|ref|NP_377586.1| - 0.019 14.1 0.0 0.039 13.1 0.0 1.5 1 0 0 1 1 1 0 HpcH/HpaI aldolase/citrate lyase family DUF2299 PF10061.9 gi|15921918|ref|NP_377587.1| - 3.4e-49 166.1 0.0 3.9e-49 166.0 0.0 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2299) Ribonuc_red_sm PF00268.21 gi|15921920|ref|NP_377589.1| - 0.031 13.7 0.7 0.035 13.6 0.1 1.4 2 0 0 2 2 2 0 Ribonucleotide reductase, small chain Methyltransf_11 PF08241.12 gi|15921921|ref|NP_377590.1| - 4.2e-20 72.2 0.0 7.7e-20 71.4 0.0 1.4 2 0 0 2 2 2 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|15921921|ref|NP_377590.1| - 1.2e-14 54.8 0.0 1.8e-14 54.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|15921921|ref|NP_377590.1| - 1.5e-10 41.1 0.0 1.8e-10 40.9 0.0 1.1 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|15921921|ref|NP_377590.1| - 2.1e-10 40.6 0.0 3.7e-10 39.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|15921921|ref|NP_377590.1| - 7.1e-08 33.1 0.0 1.2e-07 32.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|15921921|ref|NP_377590.1| - 1.2e-06 28.1 0.0 1.7e-06 27.5 0.0 1.3 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_9 PF08003.11 gi|15921921|ref|NP_377590.1| - 3.9e-05 22.7 0.1 6.9e-05 21.9 0.1 1.4 1 1 0 1 1 1 1 Protein of unknown function (DUF1698) Methyltransf_8 PF05148.15 gi|15921921|ref|NP_377590.1| - 5.7e-05 23.1 0.0 8.2e-05 22.5 0.0 1.3 1 0 0 1 1 1 1 Hypothetical methyltransferase MetW PF07021.12 gi|15921921|ref|NP_377590.1| - 0.0082 15.8 0.0 0.014 15.0 0.0 1.3 1 0 0 1 1 1 1 Methionine biosynthesis protein MetW CMAS PF02353.20 gi|15921921|ref|NP_377590.1| - 0.085 12.1 0.0 0.15 11.3 0.0 1.4 2 0 0 2 2 2 0 Mycolic acid cyclopropane synthetase AIRS_C PF02769.22 gi|15921922|ref|NP_377591.1| - 6.3e-17 62.1 0.0 9.7e-17 61.5 0.0 1.3 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|15921922|ref|NP_377591.1| - 3.1e-11 43.8 0.0 5.5e-11 43.0 0.0 1.3 1 0 0 1 1 1 1 AIR synthase related protein, N-terminal domain ThiS PF02597.20 gi|15921923|ref|NP_377592.1| - 1.8e-08 34.9 0.7 2e-08 34.7 0.7 1.0 1 0 0 1 1 1 1 ThiS family ThiS-like PF14453.6 gi|15921923|ref|NP_377592.1| - 0.00019 21.4 0.1 0.00025 21.0 0.1 1.3 1 0 0 1 1 1 1 ThiS-like ubiquitin TGS PF02824.21 gi|15921923|ref|NP_377592.1| - 0.006 16.6 0.1 0.038 14.0 0.1 2.0 1 1 0 1 1 1 1 TGS domain DUF348 PF03990.14 gi|15921923|ref|NP_377592.1| - 0.053 13.3 0.4 0.12 12.1 0.4 1.7 1 1 0 1 1 1 0 G5-linked-Ubiquitin-like domain Ub-Mut7C PF14451.6 gi|15921923|ref|NP_377592.1| - 0.081 12.8 0.2 0.16 11.8 0.2 1.5 1 1 0 1 1 1 0 Mut7-C ubiquitin Lactamase_B_5 PF14597.6 gi|15921923|ref|NP_377592.1| - 0.087 12.3 0.0 0.093 12.2 0.0 1.1 1 0 0 1 1 1 0 Metallo-beta-lactamase superfamily HEAT PF02985.22 gi|15921924|ref|NP_377593.1| - 0.006 16.7 0.1 26 5.4 0.0 4.8 4 1 1 5 5 5 1 HEAT repeat SpoIISB_antitox PF14185.6 gi|15921924|ref|NP_377593.1| - 0.5 10.3 3.1 3.9 7.5 0.1 2.5 2 0 0 2 2 2 0 Antitoxin SpoIISB, type II toxin-antitoxin system DAO PF01266.24 gi|15921925|ref|NP_377594.1| - 2.3e-28 99.8 0.0 2.7e-28 99.6 0.0 1.0 1 0 0 1 1 1 1 FAD dependent oxidoreductase DUF1955 PF09205.10 gi|15921926|ref|NP_377595.1| - 5.7e-72 240.7 9.4 6.6e-72 240.5 9.4 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF1955) Ca_bind_SSO6904 PF18249.1 gi|15921926|ref|NP_377595.1| - 0.025 14.9 0.2 0.3 11.4 0.2 2.3 1 1 1 2 2 2 0 Calcium binding protein SSO6904 TPR_5 PF12688.7 gi|15921926|ref|NP_377595.1| - 0.082 13.2 0.1 0.13 12.5 0.1 1.3 1 0 0 1 1 1 0 Tetratrico peptide repeat Bclx_interact PF08945.10 gi|15921926|ref|NP_377595.1| - 0.15 11.8 0.0 0.26 11.1 0.0 1.3 1 0 0 1 1 1 0 Bcl-x interacting, BH3 domain TPR_10 PF13374.6 gi|15921926|ref|NP_377595.1| - 0.16 11.9 0.1 0.3 11.0 0.1 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat Lipocalin_3 PF12702.7 gi|15921927|ref|NP_377596.1| - 0.0062 16.6 0.1 0.037 14.1 0.0 1.9 1 1 1 2 2 2 1 Lipocalin-like Peptidase_S78 PF04586.17 gi|15921927|ref|NP_377596.1| - 0.023 14.9 0.0 0.041 14.1 0.0 1.3 1 0 0 1 1 1 0 Caudovirus prohead serine protease 3H PF02829.14 gi|15921927|ref|NP_377596.1| - 0.026 14.8 0.1 2.1 8.7 0.0 2.6 2 0 0 2 2 2 0 3H domain Imm70 PF15601.6 gi|15921930|ref|NP_377599.1| - 0.017 14.7 0.0 0.018 14.6 0.0 1.1 1 0 0 1 1 1 0 Immunity protein 70 CcdA PF07362.12 gi|15921930|ref|NP_377599.1| - 0.018 15.5 0.0 0.025 15.0 0.0 1.3 1 0 0 1 1 1 0 Post-segregation antitoxin CcdA HeH PF12949.7 gi|15921930|ref|NP_377599.1| - 0.019 14.6 0.5 0.061 13.0 0.0 2.2 2 1 0 2 2 2 0 HeH/LEM domain POTRA_TamA_1 PF17243.2 gi|15921930|ref|NP_377599.1| - 0.02 15.0 0.4 0.037 14.1 0.2 1.5 2 0 0 2 2 2 0 POTRA domain TamA domain 1 RHH_1 PF01402.21 gi|15921930|ref|NP_377599.1| - 0.032 14.2 0.4 0.032 14.2 0.4 2.6 3 1 0 3 3 3 0 Ribbon-helix-helix protein, copG family RelB PF04221.12 gi|15921930|ref|NP_377599.1| - 0.034 14.1 0.0 0.042 13.8 0.0 1.3 1 0 0 1 1 1 0 RelB antitoxin ThiP_synth PF10120.9 gi|15921930|ref|NP_377599.1| - 0.068 12.8 0.1 0.076 12.6 0.1 1.1 1 0 0 1 1 1 0 Thiamine-phosphate synthase PIN PF01850.21 gi|15921931|ref|NP_377600.1| - 5.2e-24 85.1 1.7 6.5e-24 84.8 1.7 1.1 1 0 0 1 1 1 1 PIN domain PIN_2 PF10130.9 gi|15921931|ref|NP_377600.1| - 0.0047 17.2 0.1 0.006 16.8 0.1 1.1 1 0 0 1 1 1 1 PIN domain Lactamase_B PF00753.27 gi|15921932|ref|NP_377601.1| - 5.7e-15 55.8 1.4 7.6e-14 52.2 1.4 2.4 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|15921932|ref|NP_377601.1| - 0.00053 19.5 0.4 0.0012 18.4 0.4 1.6 1 1 0 1 1 1 1 Beta-lactamase superfamily domain TrmB PF01978.19 gi|15921933|ref|NP_377602.1| - 1.7e-25 88.6 0.2 3e-25 87.9 0.2 1.4 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|15921933|ref|NP_377602.1| - 0.00031 20.2 0.3 0.00072 19.1 0.0 1.7 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding Rrf2 PF02082.20 gi|15921933|ref|NP_377602.1| - 0.0021 18.4 0.0 0.0042 17.4 0.0 1.5 1 0 0 1 1 1 1 Transcriptional regulator HTH_29 PF13551.6 gi|15921933|ref|NP_377602.1| - 0.0022 18.0 0.0 0.0052 16.8 0.0 1.6 2 0 0 2 2 2 1 Winged helix-turn helix LexA_DNA_bind PF01726.16 gi|15921933|ref|NP_377602.1| - 0.0096 15.7 0.0 0.039 13.7 0.0 2.0 2 0 0 2 2 2 1 LexA DNA binding domain HTH_9 PF08221.11 gi|15921933|ref|NP_377602.1| - 0.012 15.7 0.0 0.028 14.5 0.0 1.6 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain HTH_23 PF13384.6 gi|15921933|ref|NP_377602.1| - 0.013 15.3 0.0 0.027 14.3 0.0 1.5 1 0 0 1 1 1 0 Homeodomain-like domain HTH_36 PF13730.6 gi|15921933|ref|NP_377602.1| - 0.018 15.0 0.7 1.9 8.5 0.0 2.5 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_28 PF13518.6 gi|15921933|ref|NP_377602.1| - 0.025 14.7 0.0 0.048 13.8 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|15921933|ref|NP_377602.1| - 0.038 14.0 0.0 0.14 12.2 0.0 1.9 2 0 0 2 2 2 0 Crp-like helix-turn-helix domain HTH_47 PF16221.5 gi|15921933|ref|NP_377602.1| - 0.065 12.8 0.0 0.21 11.2 0.0 1.8 2 0 0 2 2 2 0 winged helix-turn-helix HTH_IclR PF09339.10 gi|15921933|ref|NP_377602.1| - 0.19 11.6 0.0 0.39 10.6 0.0 1.5 1 0 0 1 1 1 0 IclR helix-turn-helix domain MarR_2 PF12802.7 gi|15921933|ref|NP_377602.1| - 0.2 11.6 0.0 0.35 10.8 0.0 1.3 1 0 0 1 1 1 0 MarR family MFS_1 PF07690.16 gi|15921934|ref|NP_377603.1| - 2.6e-34 118.7 34.7 2e-18 66.5 15.6 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|15921934|ref|NP_377603.1| - 1.1e-05 24.5 23.9 0.00022 20.2 4.2 2.3 1 1 0 2 2 2 2 Sugar (and other) transporter DUF2273 PF10031.9 gi|15921934|ref|NP_377603.1| - 0.032 14.2 3.0 0.032 14.2 3.0 6.2 7 0 0 7 7 7 0 Small integral membrane protein (DUF2273) MFS_3 PF05977.13 gi|15921934|ref|NP_377603.1| - 0.037 12.4 8.8 0.36 9.2 0.3 2.3 1 1 0 2 2 2 0 Transmembrane secretion effector dUTPase PF00692.19 gi|15921935|ref|NP_377604.1| - 1.6e-09 37.5 0.0 2.9e-09 36.7 0.0 1.4 2 0 0 2 2 2 1 dUTPase DCD PF06559.11 gi|15921935|ref|NP_377604.1| - 0.011 14.6 0.0 0.019 13.8 0.0 1.6 1 1 0 1 1 1 0 2'-deoxycytidine 5'-triphosphate deaminase (DCD) DMA PF03474.14 gi|15921936|ref|NP_377605.1| - 0.091 12.4 0.1 0.23 11.1 0.1 1.6 1 0 0 1 1 1 0 DMRTA motif DUF973 PF06157.11 gi|15921937|ref|NP_377606.1| - 1.6e-08 34.0 6.4 1.6e-08 34.0 6.4 1.8 1 1 1 2 2 2 1 Protein of unknown function (DUF973) Acetyltransf_CG PF14542.6 gi|15921939|ref|NP_377608.1| - 0.12 12.5 0.0 19 5.5 0.0 2.3 2 0 0 2 2 2 0 GCN5-related N-acetyl-transferase PaREP1 PF05942.11 gi|15921940|ref|NP_377609.1| - 5.3e-33 113.4 3.1 8.2e-33 112.8 3.1 1.3 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family DUF357 PF04010.13 gi|15921940|ref|NP_377609.1| - 0.011 15.8 1.2 0.026 14.6 0.8 2.0 1 1 0 1 1 1 0 Protein of unknown function (DUF357) Phasin_2 PF09361.10 gi|15921940|ref|NP_377609.1| - 0.03 14.6 0.4 0.1 12.9 0.4 1.8 1 1 0 1 1 1 0 Phasin protein TB2_DP1_HVA22 PF03134.19 gi|15921940|ref|NP_377609.1| - 0.043 13.7 0.3 0.07 13.1 0.3 1.3 1 0 0 1 1 1 0 TB2/DP1, HVA22 family DUF5339 PF17274.2 gi|15921940|ref|NP_377609.1| - 3.4 8.6 6.0 3.7 8.5 4.4 1.8 2 0 0 2 2 2 0 Family of unknown function (DUF5339) Fe-ADH PF00465.19 gi|15921941|ref|NP_377610.1| - 6.6e-47 160.1 0.0 1.3e-46 159.1 0.0 1.4 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH_2 PF13685.6 gi|15921941|ref|NP_377610.1| - 2.7e-06 27.3 0.0 3.7e-06 26.8 0.0 1.2 1 0 0 1 1 1 1 Iron-containing alcohol dehydrogenase PIN PF01850.21 gi|15921942|ref|NP_377611.1| - 2.7e-07 31.1 0.0 3e-07 31.0 0.0 1.1 1 0 0 1 1 1 1 PIN domain Cytidylate_kin2 PF13189.6 gi|15921943|ref|NP_377612.1| - 0.024 14.8 0.6 0.032 14.4 0.6 1.1 1 0 0 1 1 1 0 Cytidylate kinase-like family RHH_1 PF01402.21 gi|15921943|ref|NP_377612.1| - 0.052 13.5 9.2 0.34 10.9 0.3 3.3 3 0 0 3 3 3 0 Ribbon-helix-helix protein, copG family DUF3333 PF11812.8 gi|15921943|ref|NP_377612.1| - 0.061 13.5 0.1 0.074 13.3 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF3333) PIN PF01850.21 gi|15921945|ref|NP_377614.1| - 6.8e-15 55.6 0.1 8.1e-15 55.4 0.1 1.1 1 0 0 1 1 1 1 PIN domain PIN_3 PF13470.6 gi|15921945|ref|NP_377614.1| - 1.7e-05 25.6 0.0 3e-05 24.8 0.0 1.6 1 1 0 1 1 1 1 PIN domain MFS_1 PF07690.16 gi|15921946|ref|NP_377615.1| - 1.1e-25 90.3 45.2 1.6e-16 60.2 21.3 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily S1FA PF04689.13 gi|15921947|ref|NP_377616.1| - 1.7 8.9 7.4 0.11 12.6 1.7 2.0 2 0 0 2 2 2 0 DNA binding protein S1FA PspC PF04024.12 gi|15921947|ref|NP_377616.1| - 8.2 6.3 11.0 5.2 7.0 1.3 3.5 3 1 0 3 3 3 0 PspC domain DUF4554 PF15091.6 gi|15921948|ref|NP_377617.1| - 0.032 13.1 0.1 0.038 12.9 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4554) oligo_HPY PF08352.12 gi|15921949|ref|NP_377618.1| - 8.3e-06 26.2 0.0 1.6e-05 25.3 0.0 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region ABC_tran PF00005.27 gi|15921950|ref|NP_377619.1| - 4.4e-07 30.5 0.0 6.2e-07 30.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|15921950|ref|NP_377619.1| - 0.0013 19.2 3.9 0.37 11.3 0.2 2.5 1 1 1 2 2 2 2 Oligopeptide/dipeptide transporter, C-terminal region BPD_transp_1 PF00528.22 gi|15921952|ref|NP_377621.1| - 4.9e-12 46.0 12.9 4.9e-12 46.0 12.9 3.2 2 1 2 4 4 4 2 Binding-protein-dependent transport system inner membrane component Peptidase_M32 PF02074.15 gi|15921953|ref|NP_377622.1| - 1.8e-161 538.2 0.3 2.1e-161 538.0 0.3 1.0 1 0 0 1 1 1 1 Carboxypeptidase Taq (M32) metallopeptidase MMPL PF03176.15 gi|15921954|ref|NP_377623.1| - 8.1e-59 199.2 27.5 2.9e-31 108.6 8.5 2.9 3 1 0 3 3 3 2 MMPL family Sterol-sensing PF12349.8 gi|15921954|ref|NP_377623.1| - 0.00029 20.7 7.2 0.00029 20.7 7.2 2.8 2 0 0 2 2 2 1 Sterol-sensing domain of SREBP cleavage-activation HTH_46 PF15977.5 gi|15921954|ref|NP_377623.1| - 0.0075 16.3 0.2 0.28 11.2 0.1 2.8 2 0 0 2 2 2 1 Winged helix-turn-helix DNA binding DUF1664 PF07889.12 gi|15921954|ref|NP_377623.1| - 0.24 11.4 1.3 0.56 10.3 0.5 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) CDC24_OB3 PF17244.2 gi|15921954|ref|NP_377623.1| - 0.37 10.5 4.0 3.7 7.2 0.4 2.6 2 0 0 2 2 2 0 Cell division control protein 24, OB domain 3 ABC1 PF03109.16 gi|15921955|ref|NP_377624.1| - 1.5e-27 96.2 0.2 4.5e-27 94.6 0.2 1.8 1 0 0 1 1 1 1 ABC1 family RIO1 PF01163.22 gi|15921955|ref|NP_377624.1| - 3.2e-06 26.9 0.4 2.3e-05 24.1 0.4 2.2 1 1 0 1 1 1 1 RIO1 family Pkinase PF00069.25 gi|15921955|ref|NP_377624.1| - 2.1e-05 24.1 0.6 0.01 15.2 0.0 2.2 2 0 0 2 2 2 2 Protein kinase domain APH PF01636.23 gi|15921955|ref|NP_377624.1| - 0.023 14.6 0.0 0.051 13.5 0.0 1.6 1 0 0 1 1 1 0 Phosphotransferase enzyme family HSP20 PF00011.21 gi|15921956|ref|NP_377625.1| - 5e-10 39.4 0.0 6.4e-10 39.1 0.0 1.1 1 0 0 1 1 1 1 Hsp20/alpha crystallin family ArsA_HSP20 PF17886.1 gi|15921956|ref|NP_377625.1| - 2.6e-08 33.3 0.0 3.8e-08 32.8 0.0 1.2 1 0 0 1 1 1 1 HSP20-like domain found in ArsA CCG PF02754.16 gi|15921957|ref|NP_377626.1| - 8.1e-10 38.8 0.0 9e-07 29.0 0.0 2.6 2 0 0 2 2 2 2 Cysteine-rich domain Baculo_IE-1 PF05290.11 gi|15921957|ref|NP_377626.1| - 9 6.2 7.0 10 6.0 2.3 3.4 3 1 0 3 3 3 0 Baculovirus immediate-early protein (IE-0) LUD_dom PF02589.15 gi|15921958|ref|NP_377627.1| - 4.7e-54 183.0 0.2 7.3e-54 182.4 0.2 1.3 1 0 0 1 1 1 1 LUD domain Fer4_8 PF13183.6 gi|15921958|ref|NP_377627.1| - 1.9e-11 44.2 0.8 3.5e-11 43.4 0.8 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15921958|ref|NP_377627.1| - 7.5e-08 32.4 1.8 0.0081 16.3 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|15921958|ref|NP_377627.1| - 8.9e-07 29.4 1.6 1.9e-06 28.3 1.6 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15921958|ref|NP_377627.1| - 2.3e-05 24.9 3.4 5e-05 23.8 3.4 1.6 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15921958|ref|NP_377627.1| - 2.8e-05 24.2 0.8 0.065 13.4 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_20 PF14691.6 gi|15921958|ref|NP_377627.1| - 0.0015 18.3 1.4 0.16 11.7 0.1 2.5 2 0 0 2 2 2 1 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_6 PF12837.7 gi|15921958|ref|NP_377627.1| - 0.002 18.1 9.0 0.037 14.1 2.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.27 gi|15921958|ref|NP_377627.1| - 0.0022 17.7 7.9 0.019 14.8 1.7 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain NAGLU_N PF12971.7 gi|15921958|ref|NP_377627.1| - 0.01 15.6 0.1 0.043 13.6 0.1 2.1 2 0 0 2 2 2 0 Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain Fer4_21 PF14697.6 gi|15921958|ref|NP_377627.1| - 0.018 15.1 4.6 0.22 11.7 0.7 2.3 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15921958|ref|NP_377627.1| - 0.021 15.3 5.4 0.064 13.8 0.4 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|15921958|ref|NP_377627.1| - 0.051 14.4 2.2 1.8 9.5 0.4 2.5 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15921958|ref|NP_377627.1| - 0.052 14.5 7.3 0.37 11.8 7.4 2.3 1 1 0 1 1 1 0 4Fe-4S double cluster binding domain Fer4_18 PF13746.6 gi|15921958|ref|NP_377627.1| - 0.12 12.6 0.9 2.4 8.4 0.1 2.3 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15921958|ref|NP_377627.1| - 0.13 12.4 8.0 0.43 10.8 1.8 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain DUF973 PF06157.11 gi|15921959|ref|NP_377628.1| - 5.9e-82 275.2 25.9 1.2e-79 267.6 25.9 2.0 1 1 0 1 1 1 1 Protein of unknown function (DUF973) DUF973 PF06157.11 gi|15921960|ref|NP_377629.1| - 2.1e-27 96.0 43.7 2.9e-25 89.0 43.7 2.1 1 1 0 1 1 1 1 Protein of unknown function (DUF973) NHL PF01436.21 gi|15921961|ref|NP_377630.1| - 0.00089 19.2 8.2 21 5.4 0.1 6.8 7 0 0 7 7 7 1 NHL repeat SGL PF08450.12 gi|15921961|ref|NP_377630.1| - 0.016 14.8 0.4 10 5.6 0.0 3.8 2 1 2 4 4 4 0 SMP-30/Gluconolactonase/LRE-like region PQQ_3 PF13570.6 gi|15921961|ref|NP_377630.1| - 1.2 9.8 19.4 9.8 6.8 0.0 7.3 10 0 0 10 10 10 0 PQQ-like domain DUF5074 PF16819.5 gi|15921961|ref|NP_377630.1| - 5.1 7.2 9.0 3 7.9 0.0 4.1 4 0 0 4 4 4 0 Domain of unknown function (DUF5074) HpaB_N PF11794.8 gi|15921962|ref|NP_377631.1| - 2.7e-96 322.4 0.1 3.9e-96 321.9 0.1 1.2 1 0 0 1 1 1 1 4-hydroxyphenylacetate 3-hydroxylase N terminal HpaB PF03241.13 gi|15921962|ref|NP_377631.1| - 1.1e-65 220.5 0.1 1.5e-65 220.1 0.1 1.2 1 0 0 1 1 1 1 4-hydroxyphenylacetate 3-hydroxylase C terminal Acyl-CoA_dh_M PF02770.19 gi|15921962|ref|NP_377631.1| - 0.14 12.4 0.0 0.28 11.4 0.0 1.5 1 0 0 1 1 1 0 Acyl-CoA dehydrogenase, middle domain AA_permease PF00324.21 gi|15921963|ref|NP_377632.1| - 2.8e-06 26.2 55.8 6.9e-06 24.9 55.7 1.6 1 1 0 1 1 1 1 Amino acid permease FeoB_associated PF12669.7 gi|15921964|ref|NP_377633.1| - 0.19 12.1 0.2 0.19 12.1 0.2 2.9 4 0 0 4 4 4 0 FeoB-associated Cys-rich membrane protein DUF5357 PF17310.2 gi|15921964|ref|NP_377633.1| - 4.4 5.8 6.9 5.5 5.4 6.9 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5357) FYRC PF05965.14 gi|15921966|ref|NP_377635.1| - 0.095 12.9 0.0 0.18 12.0 0.0 1.4 1 0 0 1 1 1 0 F/Y rich C-terminus EB_dh PF09459.10 gi|15921967|ref|NP_377636.1| - 1.1e-32 114.0 0.0 2e-32 113.1 0.0 1.4 1 1 0 1 1 1 1 Ethylbenzene dehydrogenase SKG6 PF08693.10 gi|15921967|ref|NP_377636.1| - 6.4 6.3 10.5 0.065 12.7 1.8 2.3 2 0 0 2 2 2 0 Transmembrane alpha-helix domain Rieske PF00355.26 gi|15921969|ref|NP_377638.1| - 6.5e-09 35.6 0.1 4.2e-08 33.0 0.1 2.0 1 1 0 1 1 1 1 Rieske [2Fe-2S] domain DUF2700 PF10912.8 gi|15921969|ref|NP_377638.1| - 0.13 12.3 0.0 0.19 11.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2700) Cytochrom_B_N_2 PF13631.6 gi|15921970|ref|NP_377639.1| - 3.1e-55 186.8 3.7 3.1e-55 186.8 3.7 2.8 4 1 0 4 4 4 1 Cytochrome b(N-terminal)/b6/petB Cytochrome_B PF00033.19 gi|15921970|ref|NP_377639.1| - 9.8e-22 77.7 10.5 9.8e-22 77.7 10.5 2.4 2 0 0 2 2 2 1 Cytochrome b/b6/petB Cytochrom_B_C PF00032.17 gi|15921970|ref|NP_377639.1| - 0.00084 19.6 1.8 0.00084 19.6 1.8 3.5 5 1 0 5 5 5 1 Cytochrome b(C-terminal)/b6/petD DUF4405 PF14358.6 gi|15921970|ref|NP_377639.1| - 0.0091 16.5 1.2 0.0091 16.5 1.2 4.4 5 1 0 5 5 5 1 Domain of unknown function (DUF4405) DUF4079 PF13301.6 gi|15921970|ref|NP_377639.1| - 0.067 13.3 5.3 0.065 13.4 0.8 2.8 3 0 0 3 3 3 0 Protein of unknown function (DUF4079) SLC3A2_N PF16028.5 gi|15921970|ref|NP_377639.1| - 1.7 8.3 4.8 0.47 10.0 0.7 2.2 2 0 0 2 2 2 0 Solute carrier family 3 member 2 N-terminus DUF2976 PF11190.8 gi|15921970|ref|NP_377639.1| - 5.6 6.8 0.0 5.6 6.8 0.0 4.5 5 1 1 6 6 6 0 Protein of unknown function (DUF2976) PetM PF08041.11 gi|15921971|ref|NP_377640.1| - 0.36 10.4 3.3 0.66 9.6 3.3 1.5 1 0 0 1 1 1 0 PetM family of cytochrome b6f complex subunit 7 DUF1198 PF06711.11 gi|15921972|ref|NP_377641.1| - 0.036 14.1 0.1 8.2 6.5 0.0 2.4 2 0 0 2 2 2 0 Protein of unknown function (DUF1198) MFS_1 PF07690.16 gi|15921973|ref|NP_377642.1| - 3.1e-54 184.3 48.7 3.1e-54 184.3 48.7 1.9 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|15921973|ref|NP_377642.1| - 2.9e-09 36.3 13.4 2.9e-09 36.3 13.4 2.6 2 1 0 2 2 2 1 Sugar (and other) transporter MFS_3 PF05977.13 gi|15921973|ref|NP_377642.1| - 1.6e-06 26.8 13.3 1.6e-06 26.8 13.3 2.1 2 0 0 2 2 2 1 Transmembrane secretion effector CooC_C PF15976.5 gi|15921974|ref|NP_377643.1| - 0.04 13.9 0.2 0.083 12.9 0.2 1.4 1 0 0 1 1 1 0 CS1-pili formation C-terminal ABC_tran PF00005.27 gi|15921975|ref|NP_377644.1| - 6.9e-25 88.1 0.0 1.1e-24 87.5 0.0 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|15921975|ref|NP_377644.1| - 3e-08 33.8 0.1 6.4e-05 22.9 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|15921975|ref|NP_377644.1| - 0.11 12.9 0.9 0.11 12.9 0.9 1.8 2 0 0 2 2 2 0 AAA domain SRP54 PF00448.22 gi|15921975|ref|NP_377644.1| - 0.38 10.4 2.9 0.28 10.8 1.1 1.6 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain Glyco_hydro_65C PF03633.15 gi|15921977|ref|NP_377646.1| - 0.018 14.9 0.0 0.032 14.1 0.0 1.6 1 1 0 1 1 1 0 Glycosyl hydrolase family 65, C-terminal domain PBSX_XtrA PF17356.2 gi|15921977|ref|NP_377646.1| - 0.043 13.7 0.2 0.11 12.4 0.2 1.7 1 1 0 1 1 1 0 Phage-like element PBSX protein XtrA zinc_ribbon_2 PF13240.6 gi|15921979|ref|NP_377648.1| - 2.8e-08 33.2 6.8 4.1e-08 32.7 6.8 1.2 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|15921979|ref|NP_377648.1| - 0.00012 22.1 0.9 0.00017 21.5 0.9 1.2 1 0 0 1 1 1 1 Double zinc ribbon zf-tcix PF14952.6 gi|15921979|ref|NP_377648.1| - 0.0011 18.5 1.1 0.0016 18.0 1.1 1.2 1 0 0 1 1 1 1 Putative treble-clef, zinc-finger, Zn-binding zf-ribbon_3 PF13248.6 gi|15921979|ref|NP_377648.1| - 0.027 13.9 3.3 0.039 13.4 3.3 1.3 1 0 0 1 1 1 0 zinc-ribbon domain UPF0547 PF10571.9 gi|15921979|ref|NP_377648.1| - 0.13 12.3 4.8 0.23 11.6 4.8 1.4 1 0 0 1 1 1 0 Uncharacterised protein family UPF0547 zf_C2H2_10 PF18414.1 gi|15921979|ref|NP_377648.1| - 0.42 10.2 2.9 1.7 8.3 0.9 2.2 2 0 0 2 2 2 0 C2H2 type zinc-finger DUF2616 PF11077.8 gi|15921979|ref|NP_377648.1| - 1.1 8.9 4.5 0.21 11.3 1.2 1.5 2 0 0 2 2 2 0 Protein of unknown function (DUF2616) Alpha_GJ PF03229.13 gi|15921980|ref|NP_377649.1| - 0.017 15.7 1.5 0.017 15.7 1.5 2.1 2 0 0 2 2 2 0 Alphavirus glycoprotein J DUF4064 PF13273.6 gi|15921980|ref|NP_377649.1| - 0.18 12.1 6.9 0.12 12.7 0.7 3.5 3 0 0 3 3 3 0 Protein of unknown function (DUF4064) RIFIN PF02009.16 gi|15921980|ref|NP_377649.1| - 0.31 10.9 7.7 0.7 9.7 7.7 1.7 1 0 0 1 1 1 0 Rifin HydF_dimer PF18128.1 gi|15921980|ref|NP_377649.1| - 0.42 10.7 2.2 1.6 8.8 0.6 2.3 2 0 0 2 2 2 0 Hydrogen maturase F dimerization domain DUF5527 PF17665.1 gi|15921980|ref|NP_377649.1| - 0.63 9.6 6.0 1.4 8.5 6.0 1.5 1 0 0 1 1 1 0 Family of unknown function (DUF5527) MGC-24 PF05283.11 gi|15921980|ref|NP_377649.1| - 3.8 7.9 13.7 0.84 10.1 5.7 2.6 2 0 0 2 2 2 0 Multi-glycosylated core protein 24 (MGC-24), sialomucin TMEM154 PF15102.6 gi|15921980|ref|NP_377649.1| - 4.7 7.1 12.7 0.32 10.9 7.1 1.9 2 0 0 2 2 2 0 TMEM154 protein family MMPL PF03176.15 gi|15921981|ref|NP_377650.1| - 1.3e-62 211.7 19.9 1.3e-39 136.0 5.8 2.3 2 0 0 2 2 2 2 MMPL family RsmJ PF04378.13 gi|15921982|ref|NP_377651.1| - 0.018 14.3 0.0 0.025 13.8 0.0 1.2 1 0 0 1 1 1 0 Ribosomal RNA large subunit methyltransferase D, RlmJ DUF4295 PF14128.6 gi|15921982|ref|NP_377651.1| - 6 6.8 7.6 7.9 6.4 0.2 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF4295) DNA_pol_B PF00136.21 gi|15921983|ref|NP_377652.1| - 2.4e-13 49.6 0.8 1.6e-11 43.6 0.8 2.9 1 1 0 1 1 1 1 DNA polymerase family B LON_substr_bdg PF02190.16 gi|15921984|ref|NP_377653.1| - 0.025 14.5 0.0 0.025 14.4 0.0 1.1 1 0 0 1 1 1 0 ATP-dependent protease La (LON) substrate-binding domain PmbA_TldD PF01523.16 gi|15921985|ref|NP_377654.1| - 3.2e-13 50.2 0.3 6.9e-13 49.1 0.3 1.8 1 1 0 1 1 1 1 Putative modulator of DNA gyrase SL4P PF17618.2 gi|15921985|ref|NP_377654.1| - 0.07 13.2 0.4 0.19 11.8 0.4 1.7 1 0 0 1 1 1 0 Uncharacterized Strongylid L4 protein SEO_C PF14577.6 gi|15921986|ref|NP_377655.1| - 0.076 12.4 0.0 0.14 11.5 0.0 1.4 1 0 0 1 1 1 0 Sieve element occlusion C-terminus tRNA_anti-like PF12869.7 gi|15921986|ref|NP_377655.1| - 0.22 11.1 1.2 12 5.5 0.2 2.4 2 1 0 2 2 2 0 tRNA_anti-like Thump_like PF18096.1 gi|15921987|ref|NP_377656.1| - 0.05 13.5 0.0 0.1 12.6 0.0 1.5 1 0 0 1 1 1 0 THUMP domain-like Inhibitor_G39P PF11417.8 gi|15921987|ref|NP_377656.1| - 0.065 13.8 0.4 0.15 12.6 0.4 1.6 1 0 0 1 1 1 0 Loader and inhibitor of phage G40P DUF3352 PF11832.8 gi|15921987|ref|NP_377656.1| - 0.16 10.6 0.1 0.23 10.1 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3352) DUF5591 PF17884.1 gi|15921988|ref|NP_377657.1| - 2.5e-20 72.9 1.6 2.9e-20 72.7 1.6 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF5591) Hydantoinase_B PF02538.14 gi|15921989|ref|NP_377658.1| - 1.5e-177 591.1 0.0 1.7e-177 591.0 0.0 1.0 1 0 0 1 1 1 1 Hydantoinase B/oxoprolinase Hydantoinase_A PF01968.18 gi|15921990|ref|NP_377659.1| - 7.4e-101 337.2 3.3 1.9e-99 332.6 0.1 2.8 3 0 0 3 3 3 2 Hydantoinase/oxoprolinase Hydant_A_N PF05378.13 gi|15921990|ref|NP_377659.1| - 1.3e-50 171.6 0.0 2.4e-50 170.7 0.0 1.4 1 0 0 1 1 1 1 Hydantoinase/oxoprolinase N-terminal region MutL PF13941.6 gi|15921990|ref|NP_377659.1| - 0.0032 16.1 1.4 0.6 8.6 0.1 2.4 2 1 0 2 2 2 2 MutL protein PIN PF01850.21 gi|15921991|ref|NP_377660.1| - 4.9e-08 33.5 2.3 6e-08 33.2 2.3 1.1 1 0 0 1 1 1 1 PIN domain VAPB_antitox PF02697.14 gi|15921992|ref|NP_377661.1| - 0.0056 17.4 6.2 0.023 15.4 6.2 2.0 1 1 0 1 1 1 1 Putative antitoxin Tail_P2_I PF09684.10 gi|15921992|ref|NP_377661.1| - 0.014 15.4 0.0 0.014 15.3 0.0 1.2 1 0 0 1 1 1 0 Phage tail protein (Tail_P2_I) Pro-kuma_activ PF09286.11 gi|15921996|ref|NP_377665.1| - 6.2e-12 46.0 0.3 1.8e-11 44.5 0.1 1.8 2 0 0 2 2 2 1 Pro-kumamolisin, activation domain Peptidase_S8 PF00082.22 gi|15921996|ref|NP_377665.1| - 1.9e-06 27.4 0.1 4.4e-06 26.2 0.1 1.5 1 0 0 1 1 1 1 Subtilase family Cadherin-like PF12733.7 gi|15921996|ref|NP_377665.1| - 0.059 13.9 0.3 0.059 13.9 0.3 3.1 3 0 0 3 3 3 0 Cadherin-like beta sandwich domain A2M_BRD PF07703.14 gi|15921996|ref|NP_377665.1| - 0.13 12.6 2.1 0.57 10.5 0.0 2.9 3 0 0 3 3 3 0 Alpha-2-macroglobulin bait region domain RIFIN PF02009.16 gi|15921996|ref|NP_377665.1| - 0.28 11.1 3.2 0.46 10.3 3.2 1.3 1 0 0 1 1 1 0 Rifin ETRAMP PF09716.10 gi|15921996|ref|NP_377665.1| - 0.41 10.7 2.7 5.3 7.2 0.3 2.5 2 0 0 2 2 2 0 Malarial early transcribed membrane protein (ETRAMP) Cir_Bir_Yir PF06022.11 gi|15921997|ref|NP_377666.1| - 0.016 14.7 0.7 0.016 14.7 0.7 2.3 1 1 0 2 2 2 0 Plasmodium variant antigen protein Cir/Yir/Bir Thioredoxin_8 PF13905.6 gi|15921997|ref|NP_377666.1| - 0.61 10.4 5.1 0.33 11.3 1.6 2.4 3 1 0 3 3 3 0 Thioredoxin-like PAH PF02671.21 gi|15921997|ref|NP_377666.1| - 2.3 8.4 6.1 0.71 10.1 0.2 2.8 2 1 0 2 2 2 0 Paired amphipathic helix repeat DUF3800 PF12686.7 gi|15921998|ref|NP_377667.1| - 0.0028 18.3 0.1 0.0098 16.5 0.1 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF3800) PsiE PF06146.12 gi|15921999|ref|NP_377668.1| - 3.8e-08 33.6 3.3 3.8e-08 33.6 3.3 2.6 2 1 1 3 3 3 1 Phosphate-starvation-inducible E YIF1 PF03878.15 gi|15921999|ref|NP_377668.1| - 0.048 13.2 3.8 0.055 13.0 3.8 1.1 1 0 0 1 1 1 0 YIF1 DUF3087 PF11286.8 gi|15921999|ref|NP_377668.1| - 2.7 7.4 10.3 4.6 6.7 0.4 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3087) Methyltransf_11 PF08241.12 gi|15922000|ref|NP_377669.1| - 1.2e-09 38.7 0.0 1.7e-09 38.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|15922000|ref|NP_377669.1| - 3.7e-08 34.0 0.0 6.1e-08 33.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|15922000|ref|NP_377669.1| - 8e-06 25.8 0.0 1.1e-05 25.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|15922000|ref|NP_377669.1| - 0.00017 21.0 0.3 0.00021 20.7 0.3 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_31 PF13847.6 gi|15922000|ref|NP_377669.1| - 0.00095 19.0 1.1 0.0066 16.2 1.1 1.9 1 1 0 1 1 1 1 Methyltransferase domain LPD13 PF18825.1 gi|15922000|ref|NP_377669.1| - 0.0035 17.1 1.4 0.042 13.6 0.1 2.2 2 0 0 2 2 2 1 Large polyvalent protein-associated domain 13 Methyltransf_2 PF00891.18 gi|15922000|ref|NP_377669.1| - 0.0051 16.1 0.0 0.0066 15.8 0.0 1.1 1 0 0 1 1 1 1 O-methyltransferase domain Methyltransf_12 PF08242.12 gi|15922000|ref|NP_377669.1| - 0.0053 17.5 0.0 0.0074 17.0 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|15922000|ref|NP_377669.1| - 0.0099 15.4 0.0 0.014 15.0 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain DUF2173 PF09941.9 gi|15922001|ref|NP_377670.1| - 0.00019 21.7 0.1 0.00029 21.1 0.1 1.5 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2173) Pex24p PF06398.11 gi|15922001|ref|NP_377670.1| - 0.25 10.3 1.7 0.32 9.9 1.7 1.2 1 0 0 1 1 1 0 Integral peroxisomal membrane peroxin Deltameth_res PF16020.5 gi|15922001|ref|NP_377670.1| - 8.2 6.4 6.1 30 4.6 1.4 2.6 2 0 0 2 2 2 0 Deltamethrin resistance Imm15 PF15561.6 gi|15922003|ref|NP_377672.1| - 0.028 14.6 1.0 0.05 13.8 1.0 1.4 1 1 0 1 1 1 0 Immunity protein 15 DUF929 PF06053.11 gi|15922004|ref|NP_377673.1| - 5.8e-90 301.0 11.3 6.5e-90 300.8 11.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF929) Fer4_9 PF13187.6 gi|15922005|ref|NP_377674.1| - 6.1e-05 23.1 10.1 6.1e-05 23.1 10.1 1.7 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15922005|ref|NP_377674.1| - 6.2e-05 23.5 11.6 0.00028 21.4 0.7 3.0 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|15922005|ref|NP_377674.1| - 0.0001 22.0 3.5 0.0001 22.0 3.5 2.4 3 0 0 3 3 2 1 4Fe-4S binding domain Fer4_6 PF12837.7 gi|15922005|ref|NP_377674.1| - 0.00024 21.0 3.2 0.00024 21.0 3.2 2.2 2 0 0 2 2 1 1 4Fe-4S binding domain Fer4_10 PF13237.6 gi|15922005|ref|NP_377674.1| - 0.00045 20.3 23.5 0.0016 18.5 1.9 2.4 2 1 1 3 3 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15922005|ref|NP_377674.1| - 0.0011 18.9 13.2 0.0086 16.1 3.1 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_5 PF12801.7 gi|15922005|ref|NP_377674.1| - 0.0082 16.1 1.1 0.0082 16.1 1.1 4.7 4 0 0 4 4 2 1 4Fe-4S binding domain Fer4_8 PF13183.6 gi|15922005|ref|NP_377674.1| - 0.017 15.5 9.4 0.099 13.1 0.3 2.7 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|15922005|ref|NP_377674.1| - 0.019 15.2 4.2 0.038 14.2 4.2 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|15922005|ref|NP_377674.1| - 0.023 15.2 8.2 0.042 14.4 0.6 2.8 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|15922005|ref|NP_377674.1| - 0.036 15.0 5.5 0.036 15.0 5.5 2.8 3 0 0 3 3 2 0 4Fe-4S binding domain Fer4_11 PF13247.6 gi|15922005|ref|NP_377674.1| - 0.058 13.5 5.2 0.11 12.6 5.2 1.4 1 0 0 1 1 1 0 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15922005|ref|NP_377674.1| - 0.45 10.7 13.6 0.12 12.6 2.4 2.1 1 1 0 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15922005|ref|NP_377674.1| - 0.59 10.8 14.3 0.054 14.0 3.3 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_16 PF13484.6 gi|15922005|ref|NP_377674.1| - 0.67 10.9 13.3 0.069 14.1 2.2 2.5 1 1 1 2 2 2 0 4Fe-4S double cluster binding domain Fer4_20 PF14691.6 gi|15922005|ref|NP_377674.1| - 1.1 9.1 10.3 0.27 11.0 2.8 2.3 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_22 PF17179.4 gi|15922005|ref|NP_377674.1| - 9.8 7.1 10.6 0.17 12.7 1.3 2.4 3 0 0 3 3 2 0 4Fe-4S dicluster domain DUF1404 PF07185.11 gi|15922007|ref|NP_377676.1| - 2.6e-59 199.7 14.2 3e-59 199.5 14.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1404) Glu_dehyd_C PF16912.5 gi|15922008|ref|NP_377677.1| - 3e-27 95.5 0.0 4.3e-27 95.0 0.0 1.2 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_N PF08240.12 gi|15922008|ref|NP_377677.1| - 4.4e-23 81.3 0.5 6.8e-23 80.6 0.5 1.3 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|15922008|ref|NP_377677.1| - 0.0039 17.1 0.0 0.0075 16.3 0.0 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase FAD_binding_3 PF01494.19 gi|15922008|ref|NP_377677.1| - 0.0067 15.7 0.0 0.01 15.1 0.0 1.2 1 0 0 1 1 1 1 FAD binding domain DUF1188 PF06690.11 gi|15922008|ref|NP_377677.1| - 0.06 12.9 0.0 0.098 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF1188) HupH_C PF04809.13 gi|15922008|ref|NP_377677.1| - 0.1 12.3 0.0 0.44 10.3 0.0 1.9 2 0 0 2 2 2 0 HupH hydrogenase expression protein, C-terminal conserved region Pyr_redox_2 PF07992.14 gi|15922008|ref|NP_377677.1| - 0.13 11.4 0.0 0.21 10.8 0.0 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase FAA_hydrolase PF01557.18 gi|15922009|ref|NP_377678.1| - 5.9e-68 228.8 0.0 7e-68 228.5 0.0 1.1 1 0 0 1 1 1 1 Fumarylacetoacetate (FAA) hydrolase family KH_2 PF07650.17 gi|15922009|ref|NP_377678.1| - 0.0011 18.8 0.1 0.0028 17.4 0.1 1.7 1 0 0 1 1 1 1 KH domain ABC_tran PF00005.27 gi|15922010|ref|NP_377679.1| - 2.6e-31 109.0 0.1 2.6e-14 53.9 0.0 3.2 2 1 1 3 3 3 3 ABC transporter AAA_21 PF13304.6 gi|15922010|ref|NP_377679.1| - 3.3e-16 60.0 1.9 3.1e-05 23.9 0.0 4.2 3 1 1 4 4 4 4 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|15922010|ref|NP_377679.1| - 2.1e-06 27.7 7.5 0.052 13.3 0.0 3.4 2 2 1 3 3 3 2 AAA ATPase domain AAA_29 PF13555.6 gi|15922010|ref|NP_377679.1| - 5.3e-06 26.1 0.2 0.034 13.9 0.2 2.3 2 0 0 2 2 2 2 P-loop containing region of AAA domain AAA_24 PF13479.6 gi|15922010|ref|NP_377679.1| - 5.7e-06 26.2 0.0 0.11 12.3 0.0 2.5 2 0 0 2 2 2 2 AAA domain NB-ARC PF00931.22 gi|15922010|ref|NP_377679.1| - 6.2e-06 25.6 0.1 0.067 12.4 0.1 2.4 2 0 0 2 2 2 2 NB-ARC domain AAA_33 PF13671.6 gi|15922010|ref|NP_377679.1| - 2.6e-05 24.4 0.3 0.16 12.1 0.0 2.7 2 1 1 3 3 3 2 AAA domain NACHT PF05729.12 gi|15922010|ref|NP_377679.1| - 2.8e-05 24.1 0.8 0.092 12.7 0.0 2.5 2 1 0 2 2 2 2 NACHT domain AAA PF00004.29 gi|15922010|ref|NP_377679.1| - 3.6e-05 24.2 0.1 0.055 13.9 0.0 2.6 2 1 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_23 PF13476.6 gi|15922010|ref|NP_377679.1| - 3.9e-05 24.3 2.4 0.097 13.2 0.3 2.9 2 1 1 3 3 3 2 AAA domain AAA_22 PF13401.6 gi|15922010|ref|NP_377679.1| - 4.8e-05 23.7 0.0 0.15 12.3 0.0 2.4 2 0 0 2 2 2 2 AAA domain SRP54 PF00448.22 gi|15922010|ref|NP_377679.1| - 6.6e-05 22.6 0.1 0.046 13.4 0.1 2.3 2 0 0 2 2 2 2 SRP54-type protein, GTPase domain SMC_N PF02463.19 gi|15922010|ref|NP_377679.1| - 8.8e-05 22.0 5.7 0.41 10.0 0.4 4.0 2 2 1 4 4 4 1 RecF/RecN/SMC N terminal domain RsgA_GTPase PF03193.16 gi|15922010|ref|NP_377679.1| - 0.00021 21.3 0.9 0.12 12.2 0.0 2.7 2 1 1 3 3 3 1 RsgA GTPase MMR_HSR1 PF01926.23 gi|15922010|ref|NP_377679.1| - 0.00032 20.7 0.1 0.44 10.6 0.0 2.5 2 0 0 2 2 2 2 50S ribosome-binding GTPase AAA_30 PF13604.6 gi|15922010|ref|NP_377679.1| - 0.0004 20.2 0.1 1.2 8.8 0.0 2.5 3 0 0 3 3 2 2 AAA domain AAA_14 PF13173.6 gi|15922010|ref|NP_377679.1| - 0.00041 20.4 5.4 0.12 12.4 0.3 3.6 2 2 0 2 2 2 1 AAA domain TsaE PF02367.17 gi|15922010|ref|NP_377679.1| - 0.00054 20.0 0.1 0.94 9.5 0.0 2.4 2 0 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_7 PF12775.7 gi|15922010|ref|NP_377679.1| - 0.00061 19.4 0.0 0.67 9.4 0.0 2.3 2 0 0 2 2 2 2 P-loop containing dynein motor region AAA_16 PF13191.6 gi|15922010|ref|NP_377679.1| - 0.00087 19.7 0.0 0.93 9.8 0.0 2.4 2 0 0 2 2 2 2 AAA ATPase domain Roc PF08477.13 gi|15922010|ref|NP_377679.1| - 0.0011 19.1 0.1 1 9.6 0.0 2.5 2 0 0 2 2 2 1 Ras of Complex, Roc, domain of DAPkinase AAA_19 PF13245.6 gi|15922010|ref|NP_377679.1| - 0.0024 18.2 0.0 5.4 7.4 0.0 2.9 3 0 0 3 3 3 0 AAA domain RNA_helicase PF00910.22 gi|15922010|ref|NP_377679.1| - 0.0036 17.7 0.0 1.9 8.9 0.0 2.6 2 0 0 2 2 2 1 RNA helicase AAA_18 PF13238.6 gi|15922010|ref|NP_377679.1| - 0.0038 17.8 0.1 5 7.7 0.0 2.8 2 0 0 2 2 2 0 AAA domain cobW PF02492.19 gi|15922010|ref|NP_377679.1| - 0.0042 16.7 0.3 0.36 10.4 0.0 2.4 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain MobB PF03205.14 gi|15922010|ref|NP_377679.1| - 0.0044 16.9 6.3 0.8 9.6 0.2 3.1 3 0 0 3 3 3 2 Molybdopterin guanine dinucleotide synthesis protein B ATPase_2 PF01637.18 gi|15922010|ref|NP_377679.1| - 0.0053 16.7 1.0 1.1 9.1 0.1 2.6 2 1 0 2 2 2 1 ATPase domain predominantly from Archaea NTPase_1 PF03266.15 gi|15922010|ref|NP_377679.1| - 0.0068 16.3 2.2 2 8.3 0.3 2.7 2 1 0 2 2 2 1 NTPase PduV-EutP PF10662.9 gi|15922010|ref|NP_377679.1| - 0.0099 15.6 1.2 2.9 7.6 0.1 2.9 3 0 0 3 3 2 1 Ethanolamine utilisation - propanediol utilisation Pox_A32 PF04665.12 gi|15922010|ref|NP_377679.1| - 0.012 15.0 0.6 1.5 8.2 0.1 2.5 2 1 0 2 2 2 0 Poxvirus A32 protein AAA_5 PF07728.14 gi|15922010|ref|NP_377679.1| - 0.016 15.2 0.1 2.6 8.0 0.0 2.5 2 0 0 2 2 2 0 AAA domain (dynein-related subfamily) SbcCD_C PF13558.6 gi|15922010|ref|NP_377679.1| - 0.019 15.2 0.1 5.8 7.2 0.0 2.8 2 1 0 2 2 2 0 Putative exonuclease SbcCD, C subunit AAA_25 PF13481.6 gi|15922010|ref|NP_377679.1| - 0.039 13.5 0.0 4.7 6.7 0.0 2.4 2 0 0 2 2 2 0 AAA domain Viral_helicase1 PF01443.18 gi|15922010|ref|NP_377679.1| - 0.041 13.6 0.0 2.3 7.9 0.0 2.3 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase T2SSE PF00437.20 gi|15922010|ref|NP_377679.1| - 0.067 12.2 0.1 2.8 6.9 0.0 2.2 2 0 0 2 2 2 0 Type II/IV secretion system protein Septin PF00735.18 gi|15922010|ref|NP_377679.1| - 0.083 12.2 0.4 6.6 5.9 0.0 2.6 3 0 0 3 3 3 0 Septin AAA_28 PF13521.6 gi|15922010|ref|NP_377679.1| - 0.094 13.0 0.4 6.9 6.9 0.0 2.4 2 0 0 2 2 2 0 AAA domain PhoH PF02562.16 gi|15922010|ref|NP_377679.1| - 0.099 12.1 0.2 2.8 7.4 0.0 2.6 3 0 0 3 3 2 0 PhoH-like protein MeaB PF03308.16 gi|15922010|ref|NP_377679.1| - 0.15 11.0 0.2 16 4.4 0.0 2.3 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB TrwB_AAD_bind PF10412.9 gi|15922010|ref|NP_377679.1| - 0.16 10.8 0.2 3.6 6.4 0.0 2.3 2 0 0 2 2 2 0 Type IV secretion-system coupling protein DNA-binding domain AAA_17 PF13207.6 gi|15922010|ref|NP_377679.1| - 0.52 10.7 2.7 5.8 7.4 0.0 3.1 3 1 1 4 4 2 0 AAA domain SPW PF03779.14 gi|15922012|ref|NP_377681.1| - 0.0061 16.1 3.0 0.0061 16.1 3.0 2.9 2 2 1 3 3 3 1 SPW repeat MFS_1 PF07690.16 gi|15922013|ref|NP_377682.1| - 3.3e-44 151.2 60.7 1.1e-28 100.2 15.6 3.3 1 1 1 3 3 3 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|15922013|ref|NP_377682.1| - 6.3e-07 28.6 10.7 6.3e-07 28.6 10.7 3.0 3 1 0 3 3 3 2 Sugar (and other) transporter PUCC PF03209.15 gi|15922013|ref|NP_377682.1| - 2.6e-05 23.4 5.6 2.6e-05 23.4 5.6 2.6 2 1 0 2 2 2 1 PUCC protein OATP PF03137.20 gi|15922013|ref|NP_377682.1| - 4.8 5.3 23.0 0.85 7.8 1.2 3.6 2 2 2 4 4 4 0 Organic Anion Transporter Polypeptide (OATP) family HTH_27 PF13463.6 gi|15922014|ref|NP_377683.1| - 2.9e-13 50.1 0.5 5e-13 49.4 0.1 1.6 2 0 0 2 2 1 1 Winged helix DNA-binding domain MarR_2 PF12802.7 gi|15922014|ref|NP_377683.1| - 2.4e-10 40.1 0.2 4.8e-10 39.2 0.0 1.6 2 0 0 2 2 2 1 MarR family MarR PF01047.22 gi|15922014|ref|NP_377683.1| - 3.2e-09 36.6 0.0 8.2e-09 35.3 0.0 1.8 1 0 0 1 1 1 1 MarR family HTH_34 PF13601.6 gi|15922014|ref|NP_377683.1| - 1e-05 25.6 0.2 2.3e-05 24.5 0.0 1.7 2 0 0 2 2 2 1 Winged helix DNA-binding domain HTH_24 PF13412.6 gi|15922014|ref|NP_377683.1| - 0.00032 20.2 0.2 0.0079 15.7 0.0 3.1 3 1 0 3 3 3 1 Winged helix-turn-helix DNA-binding HxlR PF01638.17 gi|15922014|ref|NP_377683.1| - 0.0049 16.7 0.6 0.0096 15.8 0.1 1.8 2 1 0 2 2 2 1 HxlR-like helix-turn-helix Fe_dep_repress PF01325.19 gi|15922014|ref|NP_377683.1| - 0.0077 16.4 0.2 0.022 14.9 0.0 1.8 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain TrmB PF01978.19 gi|15922014|ref|NP_377683.1| - 0.012 15.4 0.9 0.03 14.2 0.1 2.2 3 1 0 3 3 3 0 Sugar-specific transcriptional regulator TrmB HTH_5 PF01022.20 gi|15922014|ref|NP_377683.1| - 0.015 15.1 0.3 0.16 11.9 0.0 2.5 3 0 0 3 3 2 0 Bacterial regulatory protein, arsR family HTH_20 PF12840.7 gi|15922014|ref|NP_377683.1| - 0.039 14.0 0.0 0.076 13.1 0.0 1.7 1 1 0 1 1 1 0 Helix-turn-helix domain DUF4423 PF14394.6 gi|15922014|ref|NP_377683.1| - 0.043 13.5 0.0 0.14 11.9 0.0 1.8 1 1 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_47 PF16221.5 gi|15922014|ref|NP_377683.1| - 0.046 13.3 0.1 0.1 12.2 0.0 1.6 2 0 0 2 2 2 0 winged helix-turn-helix HTH_1 PF00126.27 gi|15922014|ref|NP_377683.1| - 0.08 12.9 0.6 0.21 11.6 0.0 2.0 3 0 0 3 3 3 0 Bacterial regulatory helix-turn-helix protein, lysR family Daxx PF03344.15 gi|15922014|ref|NP_377683.1| - 0.13 12.4 0.0 0.17 12.0 0.0 1.3 1 0 0 1 1 1 0 Daxx N-terminal Rassf1C-interacting domain DUF501 PF04417.12 gi|15922014|ref|NP_377683.1| - 0.18 11.6 0.0 0.21 11.4 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF501) AAA PF00004.29 gi|15922015|ref|NP_377684.1| - 2.7e-73 244.6 0.0 2.7e-36 124.9 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) RuvB_N PF05496.12 gi|15922015|ref|NP_377684.1| - 3.1e-15 56.3 0.0 5.8e-08 32.6 0.0 2.8 2 1 0 2 2 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_22 PF13401.6 gi|15922015|ref|NP_377684.1| - 3.2e-15 56.6 3.2 0.0072 16.6 0.0 5.9 4 2 2 6 6 6 3 AAA domain AAA_5 PF07728.14 gi|15922015|ref|NP_377684.1| - 1e-13 51.5 1.3 1.9e-05 24.7 0.1 4.0 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_lid_3 PF17862.1 gi|15922015|ref|NP_377684.1| - 3.6e-13 49.1 0.0 7.6e-06 25.6 0.0 2.7 2 0 0 2 2 2 2 AAA+ lid domain AAA_18 PF13238.6 gi|15922015|ref|NP_377684.1| - 1.6e-12 48.1 0.0 0.00011 22.7 0.0 2.8 2 0 0 2 2 2 2 AAA domain Vps4_C PF09336.10 gi|15922015|ref|NP_377684.1| - 3.2e-12 46.3 0.2 1.3e-06 28.3 0.0 2.9 2 0 0 2 2 2 2 Vps4 C terminal oligomerisation domain AAA_16 PF13191.6 gi|15922015|ref|NP_377684.1| - 4.4e-12 46.7 0.2 1.1e-05 25.9 0.0 3.5 2 2 0 3 3 3 2 AAA ATPase domain DUF815 PF05673.13 gi|15922015|ref|NP_377684.1| - 2.5e-11 43.2 0.0 9.7e-06 24.9 0.0 2.3 2 0 0 2 2 2 2 Protein of unknown function (DUF815) AAA_14 PF13173.6 gi|15922015|ref|NP_377684.1| - 3.4e-11 43.3 0.0 1e-05 25.6 0.0 2.8 2 0 0 2 2 2 2 AAA domain TIP49 PF06068.13 gi|15922015|ref|NP_377684.1| - 1.4e-10 41.0 0.4 9.5e-05 21.8 0.0 2.6 3 0 0 3 3 2 2 TIP49 P-loop domain RNA_helicase PF00910.22 gi|15922015|ref|NP_377684.1| - 8.9e-10 38.9 0.0 0.0046 17.3 0.0 3.6 3 0 0 3 3 2 2 RNA helicase IstB_IS21 PF01695.17 gi|15922015|ref|NP_377684.1| - 4.6e-09 36.3 0.0 0.0026 17.5 0.0 3.1 3 0 0 3 3 3 2 IstB-like ATP binding protein AAA_2 PF07724.14 gi|15922015|ref|NP_377684.1| - 6.3e-09 36.2 0.0 8.3e-05 22.8 0.0 2.7 2 1 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_24 PF13479.6 gi|15922015|ref|NP_377684.1| - 1e-08 35.1 0.3 0.0064 16.2 0.0 3.0 2 1 1 3 3 2 2 AAA domain AAA_7 PF12775.7 gi|15922015|ref|NP_377684.1| - 1.5e-08 34.4 0.0 0.003 17.1 0.0 2.9 2 1 0 2 2 2 2 P-loop containing dynein motor region AAA_33 PF13671.6 gi|15922015|ref|NP_377684.1| - 1.7e-08 34.7 0.0 0.0054 16.9 0.0 2.8 3 0 0 3 3 2 2 AAA domain AAA_28 PF13521.6 gi|15922015|ref|NP_377684.1| - 5e-08 33.4 0.0 0.012 15.8 0.0 2.6 2 0 0 2 2 2 2 AAA domain Cytidylate_kin PF02224.18 gi|15922015|ref|NP_377684.1| - 1.2e-07 31.7 0.0 0.011 15.5 0.0 2.4 2 0 0 2 2 2 2 Cytidylate kinase Mg_chelatase PF01078.21 gi|15922015|ref|NP_377684.1| - 4.9e-07 29.3 0.1 0.034 13.5 0.1 2.4 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI TsaE PF02367.17 gi|15922015|ref|NP_377684.1| - 5.5e-07 29.6 0.1 0.066 13.2 0.0 2.9 3 0 0 3 3 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE SKI PF01202.22 gi|15922015|ref|NP_377684.1| - 1.2e-06 28.8 0.3 0.062 13.4 0.0 2.9 3 0 0 3 3 2 2 Shikimate kinase Sigma54_activ_2 PF14532.6 gi|15922015|ref|NP_377684.1| - 3.1e-06 27.3 0.0 0.25 11.5 0.0 3.4 3 0 0 3 3 3 2 Sigma-54 interaction domain ABC_tran PF00005.27 gi|15922015|ref|NP_377684.1| - 3.2e-06 27.7 0.0 0.15 12.6 0.0 2.6 2 0 0 2 2 2 2 ABC transporter Parvo_NS1 PF01057.17 gi|15922015|ref|NP_377684.1| - 3.6e-06 26.3 0.0 0.071 12.2 0.0 2.2 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 TniB PF05621.11 gi|15922015|ref|NP_377684.1| - 4.2e-06 26.3 1.4 0.045 13.2 0.0 4.1 4 0 0 4 4 4 1 Bacterial TniB protein AAA_3 PF07726.11 gi|15922015|ref|NP_377684.1| - 2.2e-05 24.3 0.0 0.37 10.6 0.0 3.0 2 1 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) ATPase_2 PF01637.18 gi|15922015|ref|NP_377684.1| - 2.2e-05 24.5 0.3 1.8 8.4 0.0 3.7 2 2 1 3 3 3 1 ATPase domain predominantly from Archaea AAA_25 PF13481.6 gi|15922015|ref|NP_377684.1| - 2.2e-05 24.1 2.3 0.71 9.4 0.0 4.0 4 0 0 4 4 4 2 AAA domain AAA_11 PF13086.6 gi|15922015|ref|NP_377684.1| - 2.4e-05 24.3 0.3 0.16 11.7 0.0 2.9 2 1 1 3 3 3 2 AAA domain Zeta_toxin PF06414.12 gi|15922015|ref|NP_377684.1| - 3.9e-05 23.0 0.1 0.2 10.9 0.0 2.4 2 0 0 2 2 2 2 Zeta toxin NACHT PF05729.12 gi|15922015|ref|NP_377684.1| - 5.1e-05 23.3 0.5 1.5 8.8 0.0 3.9 3 1 1 4 4 4 2 NACHT domain Rad17 PF03215.15 gi|15922015|ref|NP_377684.1| - 5.3e-05 23.2 0.0 0.14 12.1 0.0 2.7 2 0 0 2 2 2 2 Rad17 P-loop domain AAA_17 PF13207.6 gi|15922015|ref|NP_377684.1| - 5.7e-05 23.5 0.0 0.38 11.2 0.0 2.9 2 0 0 2 2 2 2 AAA domain AAA_30 PF13604.6 gi|15922015|ref|NP_377684.1| - 5.9e-05 22.9 1.8 0.44 10.2 0.2 3.4 2 2 0 2 2 2 2 AAA domain AAA_19 PF13245.6 gi|15922015|ref|NP_377684.1| - 7.4e-05 23.1 1.4 0.79 10.0 0.0 3.5 4 0 0 4 4 3 2 AAA domain ATPase PF06745.13 gi|15922015|ref|NP_377684.1| - 0.00013 21.4 3.7 4 6.7 0.0 4.5 2 2 2 4 4 4 0 KaiC NTPase_1 PF03266.15 gi|15922015|ref|NP_377684.1| - 0.00017 21.5 0.7 2.4 8.1 0.0 4.0 4 0 0 4 4 4 1 NTPase KTI12 PF08433.10 gi|15922015|ref|NP_377684.1| - 0.00024 20.6 0.0 0.44 10.0 0.0 2.5 2 0 0 2 2 2 2 Chromatin associated protein KTI12 PhoH PF02562.16 gi|15922015|ref|NP_377684.1| - 0.00029 20.4 0.1 0.34 10.3 0.0 2.5 2 0 0 2 2 2 1 PhoH-like protein NB-ARC PF00931.22 gi|15922015|ref|NP_377684.1| - 0.00033 19.9 0.0 0.59 9.3 0.0 3.2 4 0 0 4 4 3 1 NB-ARC domain AAA_6 PF12774.7 gi|15922015|ref|NP_377684.1| - 0.00039 19.5 0.5 0.69 8.8 0.0 2.9 2 1 1 3 3 3 2 Hydrolytic ATP binding site of dynein motor region CPT PF07931.12 gi|15922015|ref|NP_377684.1| - 0.00042 20.2 0.0 1.3 8.9 0.0 2.4 2 0 0 2 2 2 2 Chloramphenicol phosphotransferase-like protein Sigma54_activat PF00158.26 gi|15922015|ref|NP_377684.1| - 0.00044 20.0 0.1 1.2 8.8 0.0 3.1 4 0 0 4 4 2 1 Sigma-54 interaction domain Bac_DnaA PF00308.18 gi|15922015|ref|NP_377684.1| - 0.00054 19.9 0.0 0.86 9.4 0.0 3.1 2 1 0 2 2 2 1 Bacterial dnaA protein RsgA_GTPase PF03193.16 gi|15922015|ref|NP_377684.1| - 0.00066 19.6 0.0 0.38 10.7 0.0 2.7 2 0 0 2 2 2 1 RsgA GTPase 6PF2K PF01591.18 gi|15922015|ref|NP_377684.1| - 0.00076 18.8 0.0 0.053 12.8 0.0 2.8 3 0 0 3 3 3 1 6-phosphofructo-2-kinase IPT PF01745.16 gi|15922015|ref|NP_377684.1| - 0.0022 17.4 0.0 0.75 9.1 0.0 2.4 2 0 0 2 2 2 1 Isopentenyl transferase PduV-EutP PF10662.9 gi|15922015|ref|NP_377684.1| - 0.0024 17.6 0.0 1 9.1 0.0 2.4 2 0 0 2 2 2 1 Ethanolamine utilisation - propanediol utilisation KAP_NTPase PF07693.14 gi|15922015|ref|NP_377684.1| - 0.0027 17.0 0.3 1.9 7.6 0.0 2.9 2 1 1 3 3 3 1 KAP family P-loop domain MMR_HSR1 PF01926.23 gi|15922015|ref|NP_377684.1| - 0.0029 17.7 0.0 3.9 7.6 0.0 2.8 2 0 0 2 2 2 0 50S ribosome-binding GTPase DUF2075 PF09848.9 gi|15922015|ref|NP_377684.1| - 0.0037 16.6 0.0 2.2 7.4 0.0 2.3 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) ResIII PF04851.15 gi|15922015|ref|NP_377684.1| - 0.0047 16.9 0.0 5.3 7.0 0.0 2.9 3 0 0 3 3 2 0 Type III restriction enzyme, res subunit APS_kinase PF01583.20 gi|15922015|ref|NP_377684.1| - 0.006 16.5 0.1 4.1 7.3 0.0 2.5 2 0 0 2 2 2 0 Adenylylsulphate kinase Hydin_ADK PF17213.3 gi|15922015|ref|NP_377684.1| - 0.0064 16.8 0.0 4.3 7.6 0.0 2.3 2 0 0 2 2 2 0 Hydin Adenylate kinase-like domain Cytidylate_kin2 PF13189.6 gi|15922015|ref|NP_377684.1| - 0.0064 16.6 0.0 1.6 8.8 0.0 2.8 2 0 0 2 2 2 1 Cytidylate kinase-like family Guanylate_kin PF00625.21 gi|15922015|ref|NP_377684.1| - 0.0083 15.8 0.0 6.5 6.4 0.0 2.7 2 0 0 2 2 2 0 Guanylate kinase T2SSE PF00437.20 gi|15922015|ref|NP_377684.1| - 0.012 14.7 0.0 3.3 6.7 0.0 2.4 2 0 0 2 2 2 0 Type II/IV secretion system protein Roc PF08477.13 gi|15922015|ref|NP_377684.1| - 0.013 15.7 0.1 6 7.1 0.0 2.9 3 0 0 3 3 2 0 Ras of Complex, Roc, domain of DAPkinase PPV_E1_C PF00519.17 gi|15922015|ref|NP_377684.1| - 0.014 14.2 0.0 2.8 6.7 0.0 2.2 2 0 0 2 2 2 0 Papillomavirus helicase AAA_23 PF13476.6 gi|15922015|ref|NP_377684.1| - 0.016 15.7 2.0 5.7 7.4 0.1 2.9 2 1 0 2 2 2 0 AAA domain dNK PF01712.19 gi|15922015|ref|NP_377684.1| - 0.016 15.0 0.1 0.88 9.4 0.0 2.4 2 0 0 2 2 2 0 Deoxynucleoside kinase AAA_29 PF13555.6 gi|15922015|ref|NP_377684.1| - 0.029 14.1 0.3 5 7.0 0.0 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain SRP54 PF00448.22 gi|15922015|ref|NP_377684.1| - 0.033 13.8 0.1 12 5.5 0.0 3.0 3 0 0 3 3 2 0 SRP54-type protein, GTPase domain MeaB PF03308.16 gi|15922015|ref|NP_377684.1| - 0.035 13.1 0.0 8 5.4 0.0 2.3 2 0 0 2 2 2 0 Methylmalonyl Co-A mutase-associated GTPase MeaB Torsin PF06309.11 gi|15922015|ref|NP_377684.1| - 0.036 14.2 0.0 7.5 6.7 0.0 2.4 2 0 0 2 2 2 0 Torsin DEAD PF00270.29 gi|15922015|ref|NP_377684.1| - 0.05 13.4 2.3 3.9 7.2 0.0 3.7 4 1 1 5 5 4 0 DEAD/DEAH box helicase AAA_26 PF13500.6 gi|15922015|ref|NP_377684.1| - 0.076 12.8 0.0 8.8 6.1 0.0 2.5 2 0 0 2 2 2 0 AAA domain ATP-synt_ab PF00006.25 gi|15922015|ref|NP_377684.1| - 0.08 12.6 0.0 4.7 6.8 0.0 2.3 2 0 0 2 2 2 0 ATP synthase alpha/beta family, nucleotide-binding domain CLP1_P PF16575.5 gi|15922015|ref|NP_377684.1| - 0.1 12.4 0.1 16 5.3 0.0 2.4 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_PrkA PF08298.11 gi|15922015|ref|NP_377684.1| - 0.1 11.5 0.1 13 4.6 0.1 2.2 2 0 0 2 2 2 0 PrkA AAA domain ADK PF00406.22 gi|15922015|ref|NP_377684.1| - 0.1 12.7 0.0 17 5.5 0.0 2.8 2 0 0 2 2 2 0 Adenylate kinase Thymidylate_kin PF02223.17 gi|15922015|ref|NP_377684.1| - 0.11 12.2 0.0 11 5.7 0.0 2.5 2 0 0 2 2 2 0 Thymidylate kinase Gtr1_RagA PF04670.12 gi|15922015|ref|NP_377684.1| - 0.12 11.7 0.4 32 3.8 0.0 3.3 4 0 0 4 4 3 0 Gtr1/RagA G protein conserved region AAA_21 PF13304.6 gi|15922015|ref|NP_377684.1| - 1.4 8.7 6.9 5 6.8 0.2 3.3 3 1 1 4 4 3 0 AAA domain, putative AbiEii toxin, Type IV TA system TMEM131_like PF12371.8 gi|15922016|ref|NP_377685.1| - 0.061 13.6 0.0 0.14 12.4 0.0 1.6 1 0 0 1 1 1 0 Transmembrane protein 131-like NTP_transf_2 PF01909.23 gi|15922017|ref|NP_377686.1| - 3.9e-11 43.1 0.9 1.3e-10 41.4 0.9 1.9 1 1 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|15922017|ref|NP_377686.1| - 1.8e-08 34.4 0.3 3.4e-08 33.5 0.1 1.6 2 0 0 2 2 2 1 Polymerase beta, Nucleotidyltransferase DUF294 PF03445.13 gi|15922017|ref|NP_377686.1| - 0.0037 17.1 0.0 0.028 14.2 0.0 1.9 2 0 0 2 2 2 1 Putative nucleotidyltransferase DUF294 HEPN PF05168.14 gi|15922018|ref|NP_377687.1| - 3.5e-22 78.8 1.0 4.2e-22 78.5 1.0 1.0 1 0 0 1 1 1 1 HEPN domain TPR_10 PF13374.6 gi|15922018|ref|NP_377687.1| - 0.097 12.6 1.8 5.5 7.0 0.2 2.3 2 0 0 2 2 2 0 Tetratricopeptide repeat E1-E2_ATPase PF00122.20 gi|15922019|ref|NP_377688.1| - 1.3e-50 171.4 3.2 3.2e-50 170.2 3.2 1.7 1 0 0 1 1 1 1 E1-E2 ATPase Hydrolase PF00702.26 gi|15922019|ref|NP_377688.1| - 4.3e-33 115.4 1.5 2.5e-32 112.9 0.6 2.2 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase HMA PF00403.26 gi|15922019|ref|NP_377688.1| - 2.5e-17 63.1 10.9 3.3e-14 53.1 1.7 3.2 3 0 0 3 3 3 2 Heavy-metal-associated domain Hydrolase_3 PF08282.12 gi|15922019|ref|NP_377688.1| - 0.00013 21.8 0.0 0.011 15.4 0.0 2.6 2 0 0 2 2 2 1 haloacid dehalogenase-like hydrolase NIF PF03031.18 gi|15922019|ref|NP_377688.1| - 0.0074 16.1 0.0 0.033 14.0 0.0 2.0 2 0 0 2 2 2 1 NLI interacting factor-like phosphatase HAD_2 PF13419.6 gi|15922019|ref|NP_377688.1| - 0.083 13.0 0.7 48 4.0 0.0 3.5 4 0 0 4 4 4 0 Haloacid dehalogenase-like hydrolase DNA_ligase_OB PF03120.16 gi|15922019|ref|NP_377688.1| - 0.66 9.9 3.8 1 9.3 0.1 3.2 3 0 0 3 3 3 0 NAD-dependent DNA ligase OB-fold domain YHS PF04945.13 gi|15922020|ref|NP_377689.1| - 4.7e-20 71.4 2.1 5.8e-20 71.1 2.1 1.1 1 0 0 1 1 1 1 YHS domain Arc_trans_TRASH PF08394.10 gi|15922020|ref|NP_377689.1| - 5.1e-05 23.5 1.8 6.7e-05 23.1 1.8 1.2 1 0 0 1 1 1 1 Archaeal TRASH domain zf-FCS PF06467.14 gi|15922020|ref|NP_377689.1| - 0.00017 21.4 0.6 0.00025 20.9 0.6 1.3 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif FAP206 PF12018.8 gi|15922020|ref|NP_377689.1| - 0.0097 15.4 0.1 0.011 15.3 0.1 1.0 1 0 0 1 1 1 1 Domain of unknown function Arc_trans_TRASH PF08394.10 gi|15922021|ref|NP_377690.1| - 2.7e-19 69.2 11.4 4.8e-19 68.4 11.4 1.4 1 0 0 1 1 1 1 Archaeal TRASH domain HTH_24 PF13412.6 gi|15922021|ref|NP_377690.1| - 1.6e-11 43.6 1.8 4.1e-11 42.3 0.3 2.3 2 0 0 2 2 2 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 gi|15922021|ref|NP_377690.1| - 2.5e-09 36.9 0.7 8.5e-09 35.2 0.2 2.0 2 0 0 2 2 2 1 HTH domain HTH_AsnC-type PF13404.6 gi|15922021|ref|NP_377690.1| - 5.4e-08 32.5 0.1 1.7e-07 30.9 0.0 1.8 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_23 PF13384.6 gi|15922021|ref|NP_377690.1| - 2.4e-07 30.4 0.0 4.2e-07 29.6 0.0 1.3 1 0 0 1 1 1 1 Homeodomain-like domain MarR PF01047.22 gi|15922021|ref|NP_377690.1| - 1e-06 28.5 0.2 2.8e-06 27.2 0.1 1.8 2 0 0 2 2 1 1 MarR family TrmB PF01978.19 gi|15922021|ref|NP_377690.1| - 8.1e-06 25.6 0.4 1.8e-05 24.5 0.4 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_36 PF13730.6 gi|15922021|ref|NP_377690.1| - 6.1e-05 22.9 0.6 0.00029 20.7 0.3 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain Mga PF05043.13 gi|15922021|ref|NP_377690.1| - 0.00015 22.2 1.0 0.00032 21.2 0.2 1.9 2 0 0 2 2 1 1 Mga helix-turn-helix domain MarR_2 PF12802.7 gi|15922021|ref|NP_377690.1| - 0.00018 21.3 0.1 0.00037 20.3 0.0 1.5 2 0 0 2 2 1 1 MarR family HTH_5 PF01022.20 gi|15922021|ref|NP_377690.1| - 0.00021 21.1 0.2 0.00096 19.0 0.1 2.0 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_29 PF13551.6 gi|15922021|ref|NP_377690.1| - 0.00031 20.7 0.0 0.0005 20.0 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn helix HTH_6 PF01418.17 gi|15922021|ref|NP_377690.1| - 0.00039 20.3 0.4 0.00097 19.1 0.2 1.8 2 0 0 2 2 1 1 Helix-turn-helix domain, rpiR family HTH_IclR PF09339.10 gi|15922021|ref|NP_377690.1| - 0.00062 19.5 0.0 0.001 18.8 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain TFIIE_alpha PF02002.17 gi|15922021|ref|NP_377690.1| - 0.00067 19.5 1.1 0.00067 19.5 1.1 1.8 2 0 0 2 2 2 1 TFIIE alpha subunit Fe_dep_repress PF01325.19 gi|15922021|ref|NP_377690.1| - 0.00078 19.6 0.7 0.013 15.7 0.3 2.3 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain HTH_38 PF13936.6 gi|15922021|ref|NP_377690.1| - 0.0008 19.1 0.3 0.0018 18.0 0.3 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_50 PF18024.1 gi|15922021|ref|NP_377690.1| - 0.00085 18.9 0.2 0.0023 17.5 0.2 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_20 PF12840.7 gi|15922021|ref|NP_377690.1| - 0.00087 19.3 0.0 0.0034 17.4 0.0 1.8 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|15922021|ref|NP_377690.1| - 0.001 19.0 0.1 0.0035 17.3 0.0 1.8 2 0 0 2 2 2 1 Crp-like helix-turn-helix domain zf-FCS PF06467.14 gi|15922021|ref|NP_377690.1| - 0.0011 18.8 4.6 0.0033 17.3 4.6 1.8 1 0 0 1 1 1 1 MYM-type Zinc finger with FCS sequence motif HTH_7 PF02796.15 gi|15922021|ref|NP_377690.1| - 0.0013 18.8 0.6 0.0028 17.7 0.1 1.8 2 0 0 2 2 1 1 Helix-turn-helix domain of resolvase HTH_28 PF13518.6 gi|15922021|ref|NP_377690.1| - 0.0028 17.7 0.0 0.0051 16.9 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_22 PF13309.6 gi|15922021|ref|NP_377690.1| - 0.0044 17.1 0.6 0.046 13.8 0.4 2.3 1 1 1 2 2 2 1 HTH domain HTH_54 PF18607.1 gi|15922021|ref|NP_377690.1| - 0.0078 16.2 0.6 0.094 12.8 0.1 2.4 2 1 0 2 2 2 1 ParA helix turn helix domain DZR PF12773.7 gi|15922021|ref|NP_377690.1| - 0.01 15.9 1.9 0.024 14.6 1.9 1.6 1 1 0 1 1 1 0 Double zinc ribbon Sigma70_r4 PF04545.16 gi|15922021|ref|NP_377690.1| - 0.01 15.4 0.0 0.021 14.3 0.0 1.6 1 0 0 1 1 1 0 Sigma-70, region 4 Rrf2 PF02082.20 gi|15922021|ref|NP_377690.1| - 0.011 16.1 0.1 0.022 15.1 0.1 1.5 1 0 0 1 1 1 0 Transcriptional regulator HTH_41 PF14502.6 gi|15922021|ref|NP_377690.1| - 0.014 15.0 0.1 0.034 13.8 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain TnsD PF15978.5 gi|15922021|ref|NP_377690.1| - 0.016 14.2 0.2 0.029 13.4 0.2 1.4 1 0 0 1 1 1 0 Tn7-like transposition protein D HTH_40 PF14493.6 gi|15922021|ref|NP_377690.1| - 0.017 15.5 0.3 0.18 12.3 0.2 2.1 1 1 1 2 2 2 0 Helix-turn-helix domain SNF5 PF04855.12 gi|15922021|ref|NP_377690.1| - 0.019 14.8 0.1 0.024 14.5 0.1 1.1 1 0 0 1 1 1 0 SNF5 / SMARCB1 / INI1 HTH_9 PF08221.11 gi|15922021|ref|NP_377690.1| - 0.023 14.8 0.3 0.059 13.5 0.1 1.8 2 0 0 2 2 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain Penicillinase_R PF03965.16 gi|15922021|ref|NP_377690.1| - 0.024 15.0 0.1 0.054 13.9 0.1 1.8 1 1 0 1 1 1 0 Penicillinase repressor HTH_Tnp_ISL3 PF13542.6 gi|15922021|ref|NP_377690.1| - 0.026 14.0 0.0 0.039 13.4 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain of transposase family ISL3 MqsR_toxin PF15723.5 gi|15922021|ref|NP_377690.1| - 0.027 14.8 0.0 0.091 13.1 0.0 1.8 1 1 1 2 2 2 0 Motility quorum-sensing regulator, toxin of MqsA HTH_10 PF04967.12 gi|15922021|ref|NP_377690.1| - 0.028 14.2 0.2 0.06 13.2 0.2 1.5 1 0 0 1 1 1 0 HTH DNA binding domain HTH_Mga PF08280.11 gi|15922021|ref|NP_377690.1| - 0.034 14.2 1.1 0.071 13.1 0.2 2.0 2 0 0 2 2 1 0 M protein trans-acting positive regulator (MGA) HTH domain HTH_45 PF14947.6 gi|15922021|ref|NP_377690.1| - 0.034 14.1 0.2 0.072 13.1 0.2 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix DUF2250 PF10007.9 gi|15922021|ref|NP_377690.1| - 0.046 13.8 0.3 0.046 13.8 0.3 1.7 2 0 0 2 2 1 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_3 PF01381.22 gi|15922021|ref|NP_377690.1| - 0.048 13.7 0.1 0.14 12.3 0.1 1.8 1 0 0 1 1 1 0 Helix-turn-helix HTH_DeoR PF08220.12 gi|15922021|ref|NP_377690.1| - 0.066 13.0 0.0 0.24 11.2 0.0 1.9 2 0 0 2 2 2 0 DeoR-like helix-turn-helix domain HTH_46 PF15977.5 gi|15922021|ref|NP_377690.1| - 0.068 13.2 0.8 0.58 10.2 0.2 2.5 2 1 0 2 2 2 0 Winged helix-turn-helix DNA binding HTH_27 PF13463.6 gi|15922021|ref|NP_377690.1| - 0.07 13.6 0.0 0.12 12.8 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain GerE PF00196.19 gi|15922021|ref|NP_377690.1| - 0.082 12.5 1.0 0.15 11.7 0.2 1.8 2 0 0 2 2 1 0 Bacterial regulatory proteins, luxR family IF2_N PF04760.15 gi|15922021|ref|NP_377690.1| - 0.082 12.7 0.5 0.23 11.3 0.3 1.9 2 0 0 2 2 1 0 Translation initiation factor IF-2, N-terminal region ATPase-cat_bd PF12156.8 gi|15922021|ref|NP_377690.1| - 0.1 13.4 4.2 0.16 12.7 2.6 2.1 2 0 0 2 2 2 0 Putative metal-binding domain of cation transport ATPase GntR PF00392.21 gi|15922021|ref|NP_377690.1| - 0.17 11.6 0.0 0.4 10.4 0.0 1.6 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family HTH_43 PF09904.9 gi|15922021|ref|NP_377690.1| - 0.17 11.9 0.0 0.29 11.1 0.0 1.3 1 0 0 1 1 1 0 Winged helix-turn helix Put_DNA-bind_N PF06971.13 gi|15922021|ref|NP_377690.1| - 0.44 10.6 2.8 0.89 9.6 0.4 2.7 2 2 2 4 4 2 0 Putative DNA-binding protein N-terminus LIM PF00412.22 gi|15922021|ref|NP_377690.1| - 0.53 10.5 7.1 0.12 12.6 3.7 1.8 2 0 0 2 2 1 0 LIM domain SSV1_ORF_D-335 PF07935.11 gi|15922022|ref|NP_377691.1| - 5.8e-26 90.6 1.7 7.2e-26 90.3 1.7 1.1 1 0 0 1 1 1 1 ORF D-335-like protein DEDD_Tnp_IS110 PF01548.17 gi|15922025|ref|NP_377694.1| - 7.8e-18 64.8 0.0 1.4e-17 64.0 0.0 1.4 1 0 0 1 1 1 1 Transposase Transposase_20 PF02371.16 gi|15922025|ref|NP_377694.1| - 1.1e-10 41.7 0.1 2e-10 40.8 0.1 1.4 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family HHH PF00633.23 gi|15922025|ref|NP_377694.1| - 0.0085 15.9 0.2 0.031 14.1 0.2 2.1 1 0 0 1 1 1 1 Helix-hairpin-helix motif CdvA PF18822.1 gi|15922025|ref|NP_377694.1| - 0.016 15.0 12.3 0.63 9.9 0.1 2.5 2 0 0 2 2 2 0 CdvA-like coiled-coil domain FlgN PF05130.12 gi|15922025|ref|NP_377694.1| - 0.025 15.1 10.3 0.028 14.9 8.0 2.1 2 1 0 2 2 2 0 FlgN protein Peptidase_S48 PF03574.15 gi|15922025|ref|NP_377694.1| - 0.043 14.0 0.1 0.085 13.1 0.1 1.4 1 0 0 1 1 1 0 Peptidase family S48 HHH_5 PF14520.6 gi|15922025|ref|NP_377694.1| - 0.044 14.4 0.3 0.17 12.5 0.1 2.3 2 1 0 2 2 1 0 Helix-hairpin-helix domain TMCCDC2 PF15844.5 gi|15922025|ref|NP_377694.1| - 0.31 10.9 3.1 0.48 10.3 3.1 1.3 1 0 0 1 1 1 0 Transmembrane and coiled-coil domain-containing protein 2 5_3_exonuc PF01367.20 gi|15922025|ref|NP_377694.1| - 0.75 10.4 8.2 10 6.8 0.0 3.3 2 1 1 3 3 3 0 5'-3' exonuclease, C-terminal SAM fold DUF4709 PF15821.5 gi|15922025|ref|NP_377694.1| - 0.88 9.9 8.4 0.63 10.4 2.5 2.7 1 1 1 2 2 2 0 Domain of unknown function (DUF4709) Arg_decarbox_C PF17944.1 gi|15922025|ref|NP_377694.1| - 1.2 9.8 3.7 1.6 9.3 1.1 2.6 2 1 0 2 2 2 0 Arginine decarboxylase C-terminal helical extension Transposase_20 PF02371.16 gi|15922027|ref|NP_377696.1| - 0.079 13.3 0.2 0.19 12.1 0.1 1.7 2 0 0 2 2 2 0 Transposase IS116/IS110/IS902 family SF3a60_bindingd PF12108.8 gi|15922027|ref|NP_377696.1| - 0.11 12.4 0.3 0.26 11.2 0.3 1.6 1 0 0 1 1 1 0 Splicing factor SF3a60 binding domain DUF3792 PF12670.7 gi|15922031|ref|NP_377700.1| - 0.12 12.5 0.2 0.12 12.5 0.2 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF3792) Phenol_MetA_deg PF13557.6 gi|15922033|ref|NP_377702.1| - 0.02 14.9 1.2 0.03 14.3 1.2 1.3 1 0 0 1 1 1 0 Putative MetA-pathway of phenol degradation Trp_oprn_chp PF09534.10 gi|15922034|ref|NP_377703.1| - 0.017 14.9 0.0 0.025 14.4 0.0 1.2 1 0 0 1 1 1 0 Tryptophan-associated transmembrane protein (Trp_oprn_chp) Glyco_trans_1_3 PF13528.6 gi|15922034|ref|NP_377703.1| - 0.027 13.7 0.0 0.032 13.5 0.0 1.1 1 0 0 1 1 1 0 Glycosyl transferase family 1 LTD PF00932.19 gi|15922034|ref|NP_377703.1| - 0.059 13.7 0.1 0.074 13.4 0.1 1.2 1 0 0 1 1 1 0 Lamin Tail Domain VAPB_antitox PF02697.14 gi|15922036|ref|NP_377705.1| - 1.2e-15 58.0 10.0 1.3e-15 57.9 10.0 1.0 1 0 0 1 1 1 1 Putative antitoxin TPM_phosphatase PF04536.14 gi|15922036|ref|NP_377705.1| - 0.007 16.5 0.1 0.0076 16.4 0.1 1.1 1 0 0 1 1 1 1 TPM domain CZB PF13682.6 gi|15922036|ref|NP_377705.1| - 0.014 15.8 0.1 0.021 15.2 0.1 1.4 1 0 0 1 1 1 0 Chemoreceptor zinc-binding domain BCD PF15461.6 gi|15922037|ref|NP_377706.1| - 0.041 13.4 1.7 0.05 13.1 1.7 1.1 1 0 0 1 1 1 0 Beta-carotene 15,15'-dioxygenase DDE_Tnp_IS66_C PF13817.6 gi|15922039|ref|NP_377708.1| - 0.19 12.0 0.0 0.51 10.6 0.0 1.7 1 0 0 1 1 1 0 IS66 C-terminal element Baculo_LEF-10 PF07206.11 gi|15922039|ref|NP_377708.1| - 0.23 11.6 0.9 0.63 10.2 0.2 2.0 2 0 0 2 2 2 0 Baculovirus late expression factor 10 (LEF-10) ABC_tran PF00005.27 gi|15922040|ref|NP_377709.1| - 1.1e-21 77.8 0.0 1.5e-21 77.4 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|15922040|ref|NP_377709.1| - 2.3e-10 40.8 2.4 4.5e-05 23.4 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|15922040|ref|NP_377709.1| - 3.1e-06 26.8 0.2 0.00042 19.8 0.2 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|15922040|ref|NP_377709.1| - 4.2e-05 23.4 0.1 0.0015 18.3 0.1 2.1 2 0 0 2 2 2 1 AAA ATPase domain AAA_29 PF13555.6 gi|15922040|ref|NP_377709.1| - 0.00043 20.0 0.2 0.00074 19.2 0.2 1.3 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|15922040|ref|NP_377709.1| - 0.0024 18.4 0.0 0.0037 17.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain NACHT PF05729.12 gi|15922040|ref|NP_377709.1| - 0.022 14.7 0.2 0.039 13.9 0.2 1.4 1 0 0 1 1 1 0 NACHT domain Zeta_toxin PF06414.12 gi|15922040|ref|NP_377709.1| - 0.049 12.9 0.1 0.18 11.1 0.0 1.9 3 0 0 3 3 3 0 Zeta toxin DLIC PF05783.11 gi|15922040|ref|NP_377709.1| - 0.05 12.4 0.1 0.081 11.7 0.1 1.2 1 0 0 1 1 1 0 Dynein light intermediate chain (DLIC) AAA_16 PF13191.6 gi|15922040|ref|NP_377709.1| - 0.054 13.9 0.1 0.1 12.9 0.1 1.6 1 1 0 1 1 1 0 AAA ATPase domain DAP3 PF10236.9 gi|15922040|ref|NP_377709.1| - 0.062 12.5 0.4 0.12 11.6 0.4 1.4 1 0 0 1 1 1 0 Mitochondrial ribosomal death-associated protein 3 T2SSE PF00437.20 gi|15922040|ref|NP_377709.1| - 0.08 12.0 0.4 0.14 11.2 0.4 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein Pox_A32 PF04665.12 gi|15922040|ref|NP_377709.1| - 0.12 11.8 0.3 0.27 10.6 0.2 1.6 2 0 0 2 2 2 0 Poxvirus A32 protein G-alpha PF00503.20 gi|15922040|ref|NP_377709.1| - 0.12 11.5 0.4 0.25 10.5 0.2 1.4 1 1 0 1 1 1 0 G-protein alpha subunit NTPase_1 PF03266.15 gi|15922040|ref|NP_377709.1| - 0.12 12.3 0.0 0.52 10.2 0.0 2.0 2 1 0 2 2 2 0 NTPase RsgA_GTPase PF03193.16 gi|15922040|ref|NP_377709.1| - 0.19 11.6 0.4 0.49 10.3 0.4 1.6 2 0 0 2 2 2 0 RsgA GTPase Glyco_hydro_114 PF03537.13 gi|15922042|ref|NP_377711.1| - 4.9e-10 39.1 0.0 6.4e-10 38.7 0.0 1.2 1 0 0 1 1 1 1 Glycoside-hydrolase family GH114 Glyco_hydro_66 PF13199.6 gi|15922042|ref|NP_377711.1| - 0.003 16.3 0.1 0.0046 15.7 0.1 1.2 1 0 0 1 1 1 1 Glycosyl hydrolase family 66 DUF929 PF06053.11 gi|15922043|ref|NP_377712.1| - 2.3e-81 272.8 9.3 2.6e-81 272.6 9.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF929) ABC2_membrane_2 PF12679.7 gi|15922044|ref|NP_377713.1| - 6.5e-14 51.9 15.3 6.5e-14 51.9 15.3 2.0 1 1 0 2 2 2 1 ABC-2 family transporter protein CarboxypepD_reg PF13620.6 gi|15922044|ref|NP_377713.1| - 2.1e-06 27.9 0.1 5e-06 26.7 0.1 1.6 1 0 0 1 1 1 1 Carboxypeptidase regulatory-like domain CarbopepD_reg_2 PF13715.6 gi|15922044|ref|NP_377713.1| - 7.5e-05 22.7 0.1 0.00017 21.5 0.1 1.6 1 0 0 1 1 1 1 CarboxypepD_reg-like domain CooC_C PF15976.5 gi|15922044|ref|NP_377713.1| - 0.18 11.9 0.0 0.43 10.6 0.0 1.7 1 0 0 1 1 1 0 CS1-pili formation C-terminal ABC_tran PF00005.27 gi|15922045|ref|NP_377714.1| - 7.5e-25 88.0 0.0 1.7e-24 86.9 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|15922045|ref|NP_377714.1| - 1.8e-09 37.9 0.1 3.5e-05 23.8 0.0 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system Ribosomal_L10 PF00466.20 gi|15922045|ref|NP_377714.1| - 0.0033 17.5 0.2 0.24 11.5 0.2 2.6 2 0 0 2 2 2 1 Ribosomal protein L10 SRP54 PF00448.22 gi|15922045|ref|NP_377714.1| - 0.013 15.1 2.3 0.23 11.1 0.2 2.4 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain UMPH-1 PF05822.12 gi|15922045|ref|NP_377714.1| - 0.051 13.1 0.3 0.22 11.0 0.1 1.9 1 1 1 2 2 2 0 Pyrimidine 5'-nucleotidase (UMPH-1) DUF4162 PF13732.6 gi|15922045|ref|NP_377714.1| - 0.082 13.6 0.2 0.17 12.6 0.2 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF4162) AAA_23 PF13476.6 gi|15922045|ref|NP_377714.1| - 0.12 12.9 0.5 0.12 12.9 0.5 1.9 2 1 0 2 2 2 0 AAA domain ABC2_membrane_2 PF12679.7 gi|15922046|ref|NP_377715.1| - 1.2e-18 67.4 15.2 1.2e-18 67.4 15.2 2.1 1 1 0 2 2 2 1 ABC-2 family transporter protein DUF3975 PF13126.6 gi|15922046|ref|NP_377715.1| - 0.16 12.4 0.3 0.16 12.4 0.3 3.0 3 0 0 3 3 3 0 Protein of unknown function (DUF3975) Peptidase_S9 PF00326.21 gi|15922047|ref|NP_377716.1| - 1e-42 146.0 0.0 1.7e-42 145.3 0.0 1.4 1 0 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_1 PF00561.20 gi|15922047|ref|NP_377716.1| - 7e-13 48.8 0.1 2.9e-08 33.7 0.1 2.4 1 1 1 2 2 2 2 alpha/beta hydrolase fold DLH PF01738.18 gi|15922047|ref|NP_377716.1| - 7.2e-11 42.1 0.0 4.1e-10 39.6 0.0 2.2 1 1 0 1 1 1 1 Dienelactone hydrolase family Hydrolase_4 PF12146.8 gi|15922047|ref|NP_377716.1| - 3.9e-08 32.9 0.0 0.0015 17.8 0.0 2.2 2 0 0 2 2 2 2 Serine aminopeptidase, S33 BAAT_C PF08840.11 gi|15922047|ref|NP_377716.1| - 1.1e-07 32.0 0.0 1.5e-05 25.0 0.0 2.3 1 1 0 1 1 1 1 BAAT / Acyl-CoA thioester hydrolase C terminal Abhydrolase_6 PF12697.7 gi|15922047|ref|NP_377716.1| - 1.4e-05 25.8 0.0 0.00021 22.0 0.0 2.0 1 1 1 2 2 2 1 Alpha/beta hydrolase family Peptidase_S15 PF02129.18 gi|15922047|ref|NP_377716.1| - 4.3e-05 23.3 0.0 0.018 14.6 0.0 2.4 1 1 1 2 2 2 2 X-Pro dipeptidyl-peptidase (S15 family) Esterase PF00756.20 gi|15922047|ref|NP_377716.1| - 0.00047 19.9 0.0 0.00096 18.9 0.0 1.6 2 0 0 2 2 2 1 Putative esterase Abhydrolase_4 PF08386.10 gi|15922047|ref|NP_377716.1| - 0.0016 18.5 0.0 0.0043 17.1 0.0 1.7 2 0 0 2 2 2 1 TAP-like protein Abhydrolase_3 PF07859.13 gi|15922047|ref|NP_377716.1| - 0.004 17.0 0.0 0.062 13.1 0.0 2.3 1 1 0 1 1 1 1 alpha/beta hydrolase fold AXE1 PF05448.12 gi|15922047|ref|NP_377716.1| - 0.005 15.6 0.0 0.016 13.9 0.0 1.8 1 1 0 1 1 1 1 Acetyl xylan esterase (AXE1) Peptidase_S28 PF05577.12 gi|15922047|ref|NP_377716.1| - 0.023 13.5 0.0 0.037 12.8 0.0 1.2 1 0 0 1 1 1 0 Serine carboxypeptidase S28 UPF0227 PF05728.12 gi|15922047|ref|NP_377716.1| - 0.038 13.9 0.0 0.081 12.9 0.0 1.5 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0227) Abhydrolase_2 PF02230.16 gi|15922047|ref|NP_377716.1| - 0.085 12.7 0.0 5.5 6.7 0.0 2.8 3 0 0 3 3 3 0 Phospholipase/Carboxylesterase ATPase_2 PF01637.18 gi|15922048|ref|NP_377717.1| - 5.2e-16 59.3 2.3 3.5e-15 56.6 2.3 2.0 1 1 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_14 PF13173.6 gi|15922048|ref|NP_377717.1| - 1.3e-09 38.2 0.2 0.00011 22.3 0.1 2.4 1 1 0 2 2 2 2 AAA domain AAA_16 PF13191.6 gi|15922048|ref|NP_377717.1| - 6.5e-07 29.9 0.0 2.7e-06 27.9 0.0 2.0 2 1 0 2 2 2 1 AAA ATPase domain AAA_35 PF14516.6 gi|15922048|ref|NP_377717.1| - 5.4e-05 22.2 0.8 0.026 13.3 0.6 2.3 2 0 0 2 2 2 2 AAA-like domain AAA_22 PF13401.6 gi|15922048|ref|NP_377717.1| - 0.0027 18.0 0.2 0.058 13.7 0.2 2.4 1 1 0 1 1 1 1 AAA domain AAA PF00004.29 gi|15922048|ref|NP_377717.1| - 0.011 16.2 0.1 0.07 13.6 0.1 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Bac_DnaA PF00308.18 gi|15922048|ref|NP_377717.1| - 0.06 13.2 0.1 0.21 11.4 0.1 1.9 2 0 0 2 2 2 0 Bacterial dnaA protein DUF2120 PF09893.9 gi|15922048|ref|NP_377717.1| - 0.087 12.9 0.6 3.5 7.7 0.1 2.2 2 0 0 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2120) IstB_IS21 PF01695.17 gi|15922048|ref|NP_377717.1| - 0.1 12.3 0.0 3.2 7.5 0.0 2.2 2 0 0 2 2 2 0 IstB-like ATP binding protein YhfT PF10797.9 gi|15922048|ref|NP_377717.1| - 0.15 11.1 0.1 0.38 9.7 0.0 1.5 2 0 0 2 2 2 0 Protein of unknown function PaREP1 PF05942.11 gi|15922050|ref|NP_377719.1| - 1.9e-22 79.3 3.9 1.9e-22 79.3 3.9 1.5 2 0 0 2 2 2 1 Archaeal PaREP1/PaREP8 family DUF357 PF04010.13 gi|15922050|ref|NP_377719.1| - 0.00033 20.7 0.1 0.0008 19.4 0.1 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF357) HEPN PF05168.14 gi|15922050|ref|NP_377719.1| - 0.0077 16.4 2.3 0.01 15.9 0.8 1.9 2 0 0 2 2 2 1 HEPN domain ComZ PF10815.8 gi|15922050|ref|NP_377719.1| - 0.031 14.3 1.2 0.051 13.6 0.1 1.8 2 0 0 2 2 2 0 ComZ HTH_45 PF14947.6 gi|15922051|ref|NP_377720.1| - 0.00024 21.0 1.6 0.0006 19.7 0.5 2.0 2 0 0 2 2 2 1 Winged helix-turn-helix HTH_27 PF13463.6 gi|15922051|ref|NP_377720.1| - 0.00066 20.1 0.0 0.0013 19.2 0.0 1.5 1 0 0 1 1 1 1 Winged helix DNA-binding domain SMC_Nse1 PF07574.13 gi|15922051|ref|NP_377720.1| - 0.0058 16.5 0.0 0.008 16.1 0.0 1.3 1 0 0 1 1 1 1 Nse1 non-SMC component of SMC5-6 complex HTH_34 PF13601.6 gi|15922051|ref|NP_377720.1| - 0.0064 16.6 0.1 0.021 15.0 0.1 2.0 1 1 0 1 1 1 1 Winged helix DNA-binding domain DUF4423 PF14394.6 gi|15922051|ref|NP_377720.1| - 0.0073 16.0 0.2 0.018 14.7 0.2 1.7 1 1 0 1 1 1 1 Domain of unknown function (DUF4423) PCI PF01399.27 gi|15922051|ref|NP_377720.1| - 0.011 16.2 0.0 0.11 13.0 0.0 2.0 1 1 1 2 2 2 0 PCI domain SWIB PF02201.18 gi|15922051|ref|NP_377720.1| - 0.023 14.6 0.1 0.052 13.4 0.1 1.7 1 0 0 1 1 1 0 SWIB/MDM2 domain MarR_2 PF12802.7 gi|15922051|ref|NP_377720.1| - 0.047 13.6 0.0 0.07 13.0 0.0 1.3 1 0 0 1 1 1 0 MarR family AlgF PF11182.8 gi|15922051|ref|NP_377720.1| - 0.085 12.6 0.0 0.1 12.3 0.0 1.1 1 0 0 1 1 1 0 Alginate O-acetyl transferase AlgF SpoU_sub_bind PF08032.12 gi|15922051|ref|NP_377720.1| - 0.14 12.5 0.1 0.47 10.8 0.1 1.8 2 0 0 2 2 2 0 RNA 2'-O ribose methyltransferase substrate binding DUF998 PF06197.13 gi|15922052|ref|NP_377721.1| - 3.7e-19 69.0 11.6 4.7e-19 68.7 11.6 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF998) PhoLip_ATPase_C PF16212.5 gi|15922052|ref|NP_377721.1| - 0.071 12.8 8.6 0.098 12.4 8.6 1.1 1 0 0 1 1 1 0 Phospholipid-translocating P-type ATPase C-terminal AI-2E_transport PF01594.16 gi|15922052|ref|NP_377721.1| - 0.091 11.9 17.7 0.12 11.5 5.7 2.0 2 0 0 2 2 2 0 AI-2E family transporter Cas_APE2256 PF09651.10 gi|15922053|ref|NP_377722.1| - 4.6e-37 127.0 0.3 1.2e-36 125.7 0.3 1.7 2 0 0 2 2 2 1 CRISPR-associated protein (Cas_APE2256) Cas_Cas02710 PF09670.10 gi|15922053|ref|NP_377722.1| - 0.021 13.7 0.0 0.035 12.9 0.0 1.4 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Cas02710) Thioredoxin_8 PF13905.6 gi|15922053|ref|NP_377722.1| - 0.058 13.7 1.7 1.7 9.0 0.2 2.6 1 1 1 2 2 2 0 Thioredoxin-like SWIM PF04434.17 gi|15922054|ref|NP_377723.1| - 2.4e-05 23.9 0.5 4.5e-05 23.0 0.5 1.5 1 0 0 1 1 1 1 SWIM zinc finger Herpes_UL24 PF01646.16 gi|15922054|ref|NP_377723.1| - 0.072 13.0 0.0 0.17 11.8 0.0 1.6 1 0 0 1 1 1 0 Herpes virus proteins UL24 and UL76 SPOB_a PF14689.6 gi|15922054|ref|NP_377723.1| - 0.39 10.5 6.4 0.25 11.1 0.7 3.4 4 1 0 4 4 4 0 Sensor_kinase_SpoOB-type, alpha-helical domain Peptidase_S9 PF00326.21 gi|15922055|ref|NP_377724.1| - 9.7e-43 146.1 0.0 1.5e-42 145.5 0.0 1.3 1 0 0 1 1 1 1 Prolyl oligopeptidase family Abhydrolase_1 PF00561.20 gi|15922055|ref|NP_377724.1| - 1.8e-08 34.3 0.6 4.1e-05 23.4 0.5 2.3 1 1 1 2 2 2 2 alpha/beta hydrolase fold DLH PF01738.18 gi|15922055|ref|NP_377724.1| - 1.8e-07 31.0 0.0 1.9e-06 27.6 0.0 2.1 1 1 0 1 1 1 1 Dienelactone hydrolase family Peptidase_S15 PF02129.18 gi|15922055|ref|NP_377724.1| - 1.8e-06 27.8 0.2 0.013 15.1 0.4 2.2 1 1 1 2 2 2 2 X-Pro dipeptidyl-peptidase (S15 family) Hydrolase_4 PF12146.8 gi|15922055|ref|NP_377724.1| - 8.9e-05 21.9 0.1 0.046 13.0 0.0 2.3 1 1 1 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 gi|15922055|ref|NP_377724.1| - 0.00032 21.4 0.7 0.00095 19.8 0.6 1.7 1 1 1 2 2 2 1 Alpha/beta hydrolase family DUF5074 PF16819.5 gi|15922055|ref|NP_377724.1| - 0.0088 16.1 1.0 2.9 8.0 0.1 3.1 2 1 1 3 3 3 1 Domain of unknown function (DUF5074) BAAT_C PF08840.11 gi|15922055|ref|NP_377724.1| - 0.0097 15.9 0.0 0.7 9.8 0.0 2.3 2 0 0 2 2 2 1 BAAT / Acyl-CoA thioester hydrolase C terminal LIP PF03583.14 gi|15922055|ref|NP_377724.1| - 0.018 14.4 0.2 0.031 13.6 0.2 1.3 1 0 0 1 1 1 0 Secretory lipase PhoPQ_related PF10142.9 gi|15922055|ref|NP_377724.1| - 0.022 13.5 0.2 0.038 12.7 0.2 1.3 1 0 0 1 1 1 0 PhoPQ-activated pathogenicity-related protein Abhydrolase_2 PF02230.16 gi|15922055|ref|NP_377724.1| - 0.052 13.3 0.1 7.6 6.3 0.0 2.3 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase Peptidase_M1 PF01433.20 gi|15922056|ref|NP_377725.1| - 6.6e-82 274.3 2.9 1.4e-81 273.2 2.9 1.6 1 0 0 1 1 1 1 Peptidase family M1 domain Peptidase_M1_N PF17900.1 gi|15922056|ref|NP_377725.1| - 1.3e-30 106.9 0.2 4.2e-30 105.3 0.1 1.8 2 0 0 2 2 2 1 Peptidase M1 N-terminal domain ERAP1_C PF11838.8 gi|15922056|ref|NP_377725.1| - 1.8e-24 86.9 0.7 6.5e-24 85.0 0.2 2.0 2 0 0 2 2 2 1 ERAP1-like C-terminal domain PaREP1 PF05942.11 gi|15922057|ref|NP_377726.1| - 9.2e-19 67.5 1.4 1e-18 67.3 1.4 1.0 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family DUF269 PF03270.13 gi|15922057|ref|NP_377726.1| - 0.064 13.4 0.1 0.15 12.1 0.0 1.6 1 1 1 2 2 2 0 Protein of unknown function, DUF269 PaREP1 PF05942.11 gi|15922058|ref|NP_377727.1| - 9.7e-28 96.4 1.9 1.1e-27 96.2 1.9 1.1 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family HEPN PF05168.14 gi|15922058|ref|NP_377727.1| - 0.00094 19.3 1.7 0.0021 18.2 1.7 1.6 1 1 0 1 1 1 1 HEPN domain DUF357 PF04010.13 gi|15922058|ref|NP_377727.1| - 0.0017 18.4 0.5 0.075 13.1 0.0 2.4 2 1 0 2 2 2 1 Protein of unknown function (DUF357) DUF5082 PF16888.5 gi|15922058|ref|NP_377727.1| - 0.0033 17.7 0.6 0.0047 17.2 0.6 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF5082) Vps23_core PF09454.10 gi|15922058|ref|NP_377727.1| - 0.016 15.1 0.3 0.061 13.3 0.2 1.9 2 0 0 2 2 2 0 Vps23 core domain DUF4398 PF14346.6 gi|15922058|ref|NP_377727.1| - 0.054 14.1 0.9 0.11 13.2 0.9 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4398) MnmE_helical PF12631.7 gi|15922058|ref|NP_377727.1| - 0.097 12.8 0.5 0.14 12.3 0.4 1.3 1 1 0 1 1 1 0 MnmE helical domain Arylesterase PF01731.20 gi|15922059|ref|NP_377728.1| - 1.2e-15 57.4 18.8 0.0029 17.7 0.1 7.3 2 2 4 7 7 7 5 Arylesterase NHL PF01436.21 gi|15922059|ref|NP_377728.1| - 1.4e-13 50.1 6.7 0.11 12.6 0.1 7.1 6 0 0 6 6 6 5 NHL repeat Lactonase PF10282.9 gi|15922059|ref|NP_377728.1| - 8.5e-10 38.4 0.4 0.00062 19.1 0.3 3.3 2 1 0 2 2 2 2 Lactonase, 7-bladed beta-propeller SGL PF08450.12 gi|15922059|ref|NP_377728.1| - 1.7e-08 34.3 0.1 0.12 11.9 0.0 4.1 1 1 2 4 4 4 3 SMP-30/Gluconolactonase/LRE-like region OCRE PF17780.1 gi|15922059|ref|NP_377728.1| - 4.1e-06 26.7 18.7 4.9 7.3 0.0 7.2 7 0 0 7 7 7 2 OCRE domain ToxS PF17323.2 gi|15922059|ref|NP_377728.1| - 0.00093 18.9 5.9 1.1 8.9 0.3 4.2 2 2 2 4 4 4 2 Trans-membrane regulatory protein ToxS Me-amine-dh_H PF06433.11 gi|15922059|ref|NP_377728.1| - 0.0018 17.2 1.3 0.52 9.1 0.1 3.7 1 1 3 4 4 4 1 Methylamine dehydrogenase heavy chain (MADH) FlaG PF03646.15 gi|15922059|ref|NP_377728.1| - 0.0035 17.5 10.0 19 5.5 0.1 5.9 6 0 0 6 6 6 0 FlaG protein HEV_ORF1 PF02444.16 gi|15922059|ref|NP_377728.1| - 0.012 16.1 3.4 3.4 8.2 0.1 4.0 2 2 3 5 5 5 0 Hepatitis E virus ORF-2 (Putative capsid protein) Cytochrom_D1 PF02239.16 gi|15922059|ref|NP_377728.1| - 0.013 14.1 0.7 1.2 7.6 0.2 2.8 2 1 0 2 2 2 0 Cytochrome D1 heme domain CppA_N PF14506.6 gi|15922059|ref|NP_377728.1| - 0.03 14.4 0.2 21 5.2 0.0 4.4 2 2 3 5 5 5 0 CppA N-terminal DUF5383 PF17355.2 gi|15922059|ref|NP_377728.1| - 0.076 13.4 0.6 0.16 12.4 0.6 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5383) Kelch_3 PF13415.6 gi|15922059|ref|NP_377728.1| - 0.33 11.3 1.5 13 6.3 0.1 4.0 2 1 1 3 3 3 0 Galactose oxidase, central domain He_PIG PF05345.12 gi|15922059|ref|NP_377728.1| - 0.36 11.1 21.7 11 6.3 1.7 6.3 3 2 1 4 4 4 0 Putative Ig domain PilJ_C PF18223.1 gi|15922059|ref|NP_377728.1| - 2.7 8.6 14.8 32 5.1 0.4 5.6 4 3 3 7 7 7 0 Pili PilJ C-terminal domain Secretin_N PF03958.17 gi|15922059|ref|NP_377728.1| - 9.6 6.7 9.3 5.3 7.5 0.2 4.3 4 1 1 5 5 5 0 Bacterial type II/III secretion system short domain DUF4097 PF13349.6 gi|15922060|ref|NP_377729.1| - 7.1e-09 35.4 0.2 9.4e-09 35.0 0.2 1.1 1 0 0 1 1 1 1 Putative adhesin DUF3971 PF13116.6 gi|15922060|ref|NP_377729.1| - 0.029 13.9 0.0 0.041 13.4 0.0 1.3 1 1 0 1 1 1 0 Protein of unknown function DUF4097 PF13349.6 gi|15922061|ref|NP_377730.1| - 1.6e-07 30.9 2.2 4.4e-07 29.5 2.2 1.7 1 1 0 1 1 1 1 Putative adhesin Cas6_N PF17952.1 gi|15922062|ref|NP_377731.1| - 9.2e-28 96.8 1.8 9.2e-28 96.8 1.8 1.7 2 0 0 2 2 2 1 Cas6 N-terminal domain CRISPR_Cas6 PF10040.9 gi|15922062|ref|NP_377731.1| - 1.4e-14 54.5 0.0 2.1e-14 53.9 0.0 1.3 1 0 0 1 1 1 1 CRISPR-associated endoribonuclease Cas6 Cas_Cas6 PF01881.16 gi|15922062|ref|NP_377731.1| - 3.2e-05 24.5 1.6 3.2e-05 24.5 1.6 1.4 2 0 0 2 2 2 1 CRISPR associated protein Cas6 Apolipoprotein PF01442.18 gi|15922063|ref|NP_377732.1| - 2.4e-12 47.1 23.5 3.6e-11 43.3 10.0 2.4 1 1 1 2 2 2 2 Apolipoprotein A1/A4/E domain Fzo_mitofusin PF04799.13 gi|15922063|ref|NP_377732.1| - 1e-05 25.2 14.4 0.22 11.1 3.1 3.9 1 1 3 4 4 4 4 fzo-like conserved region Baculo_PEP_C PF04513.12 gi|15922063|ref|NP_377732.1| - 0.00019 21.5 12.9 0.042 13.9 7.3 3.5 1 1 1 2 2 2 2 Baculovirus polyhedron envelope protein, PEP, C terminus DUF1664 PF07889.12 gi|15922063|ref|NP_377732.1| - 0.0014 18.6 24.8 0.052 13.6 4.1 4.0 1 1 3 4 4 4 3 Protein of unknown function (DUF1664) DUF883 PF05957.13 gi|15922063|ref|NP_377732.1| - 0.0025 18.4 16.8 0.073 13.7 3.2 3.9 1 1 5 6 6 6 4 Bacterial protein of unknown function (DUF883) Tup_N PF08581.10 gi|15922063|ref|NP_377732.1| - 0.0036 17.6 23.4 0.073 13.4 3.6 4.6 2 1 2 5 5 5 2 Tup N-terminal Prominin PF05478.11 gi|15922063|ref|NP_377732.1| - 0.0081 14.2 11.8 0.012 13.7 11.8 1.2 1 0 0 1 1 1 1 Prominin T3SS_needle_F PF09392.10 gi|15922063|ref|NP_377732.1| - 0.0097 16.1 7.2 11 6.3 0.2 5.0 2 1 3 6 6 6 0 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF GAS PF13851.6 gi|15922063|ref|NP_377732.1| - 0.013 14.8 26.3 0.085 12.2 7.9 3.1 1 1 2 3 3 3 0 Growth-arrest specific micro-tubule binding Gp58 PF07902.11 gi|15922063|ref|NP_377732.1| - 0.017 13.5 13.2 0.051 11.9 12.9 1.7 1 1 1 2 2 2 0 gp58-like protein NERD PF08378.11 gi|15922063|ref|NP_377732.1| - 0.022 15.2 0.2 0.073 13.5 0.2 2.0 1 0 0 1 1 1 0 Nuclease-related domain DLP_helical PF18709.1 gi|15922063|ref|NP_377732.1| - 0.062 12.5 21.1 0.54 9.4 7.1 3.4 1 1 2 3 3 3 0 Dynamin-like helical domain PIN_8 PF18476.1 gi|15922063|ref|NP_377732.1| - 0.077 12.8 19.3 1.1 9.0 8.9 2.6 1 1 1 2 2 2 0 PIN like domain DUF1043 PF06295.12 gi|15922063|ref|NP_377732.1| - 0.081 12.9 8.6 0.15 12.1 1.2 3.0 2 1 2 4 4 3 0 Protein of unknown function (DUF1043) DUF1640 PF07798.11 gi|15922063|ref|NP_377732.1| - 0.096 12.7 31.8 0.35 10.9 12.4 2.6 1 1 1 2 2 2 0 Protein of unknown function (DUF1640) VP4_helical PF17478.2 gi|15922063|ref|NP_377732.1| - 0.12 11.8 4.6 16 4.8 0.5 4.1 2 2 2 4 4 4 0 Rotavirus VP4 helical domain DIT1_PvcA PF05141.12 gi|15922063|ref|NP_377732.1| - 0.12 11.8 14.5 7.6e+02 -0.6 14.5 2.9 1 1 0 1 1 1 0 Pyoverdine/dityrosine biosynthesis protein DUF4709 PF15821.5 gi|15922063|ref|NP_377732.1| - 0.13 12.6 20.1 0.88 9.9 4.6 3.9 2 1 2 4 4 4 0 Domain of unknown function (DUF4709) DUF4407 PF14362.6 gi|15922063|ref|NP_377732.1| - 0.14 11.4 13.9 0.22 10.9 13.9 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) ApoO PF09769.9 gi|15922063|ref|NP_377732.1| - 0.19 11.7 5.7 7 6.6 3.6 3.5 2 1 0 2 2 2 0 Apolipoprotein O Syntaxin-6_N PF09177.11 gi|15922063|ref|NP_377732.1| - 0.19 12.3 21.6 18 5.9 2.3 5.1 1 1 2 3 3 3 0 Syntaxin 6, N-terminal YqjK PF13997.6 gi|15922063|ref|NP_377732.1| - 0.23 11.7 0.0 25 5.2 0.0 3.5 3 1 1 4 4 4 0 YqjK-like protein hDGE_amylase PF14701.6 gi|15922063|ref|NP_377732.1| - 0.23 10.5 12.4 0.39 9.7 12.3 1.3 1 1 0 1 1 1 0 Glycogen debranching enzyme, glucanotransferase domain Lectin_N PF03954.14 gi|15922063|ref|NP_377732.1| - 0.27 11.0 12.9 2 8.2 3.0 3.2 2 1 2 4 4 3 0 Hepatic lectin, N-terminal domain Phe_tRNA-synt_N PF02912.18 gi|15922063|ref|NP_377732.1| - 0.28 11.1 30.7 0.17 11.8 3.5 5.4 2 1 4 6 6 5 0 Aminoacyl tRNA synthetase class II, N-terminal domain Exonuc_VII_L PF02601.15 gi|15922063|ref|NP_377732.1| - 0.57 9.7 12.3 11 5.4 12.3 2.1 1 1 0 1 1 1 0 Exonuclease VII, large subunit YlqD PF11068.8 gi|15922063|ref|NP_377732.1| - 0.57 10.5 19.8 1.4 9.3 3.5 3.6 2 1 1 3 3 3 0 YlqD protein LMP PF04778.12 gi|15922063|ref|NP_377732.1| - 0.86 9.5 26.1 7.5 6.5 8.0 3.3 1 1 1 2 2 2 0 LMP repeated region DUF1451 PF07295.11 gi|15922063|ref|NP_377732.1| - 1.1 9.2 21.2 3.2 7.8 0.6 4.1 1 1 2 4 4 4 0 Zinc-ribbon containing domain Brr6_like_C_C PF10104.9 gi|15922063|ref|NP_377732.1| - 1.2 8.9 12.4 7 6.4 0.8 4.6 1 1 6 7 7 7 0 Di-sulfide bridge nucleocytoplasmic transport domain HalX PF08663.10 gi|15922063|ref|NP_377732.1| - 1.7 9.0 18.8 73 3.8 0.4 5.6 1 1 3 4 4 4 0 HalX domain MICSWaP PF17018.5 gi|15922063|ref|NP_377732.1| - 1.8 8.1 16.2 1.7 8.1 1.9 4.0 1 1 4 5 5 5 0 Spore wall protein Sds3 PF08598.11 gi|15922063|ref|NP_377732.1| - 2.2 8.2 23.5 6.3 6.7 4.4 2.7 1 1 1 2 2 2 0 Sds3-like HIP1_clath_bdg PF16515.5 gi|15922063|ref|NP_377732.1| - 3.3 8.4 23.0 36 5.0 7.9 4.1 2 1 2 4 4 3 0 Clathrin-binding domain of Huntingtin-interacting protein 1 DPM3 PF08285.11 gi|15922063|ref|NP_377732.1| - 3.9 7.7 16.3 3.6 7.9 0.3 5.3 1 1 5 7 7 7 0 Dolichol-phosphate mannosyltransferase subunit 3 (DPM3) Mitofilin PF09731.9 gi|15922063|ref|NP_377732.1| - 6.7 5.4 26.3 47 2.6 24.9 2.0 1 1 0 1 1 1 0 Mitochondrial inner membrane protein HEPN PF05168.14 gi|15922064|ref|NP_377733.1| - 8.1e-23 80.8 0.3 9.8e-23 80.5 0.3 1.1 1 0 0 1 1 1 1 HEPN domain Arm_vescicular PF18770.1 gi|15922064|ref|NP_377733.1| - 0.13 12.2 0.1 0.23 11.4 0.1 1.4 1 0 0 1 1 1 0 Armadillo tether-repeat of vescicular transport factor PaREP1 PF05942.11 gi|15922066|ref|NP_377735.1| - 8.3e-27 93.4 0.4 1.3e-26 92.8 0.4 1.3 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family IDEAL PF08858.10 gi|15922066|ref|NP_377735.1| - 0.054 13.2 0.1 0.19 11.5 0.0 2.0 2 0 0 2 2 2 0 IDEAL domain AA_permease_2 PF13520.6 gi|15922067|ref|NP_377736.1| - 1.9e-26 92.9 63.5 1.9e-26 92.9 63.5 1.5 1 1 1 2 2 2 2 Amino acid permease AA_permease PF00324.21 gi|15922067|ref|NP_377736.1| - 2.6e-19 69.2 57.6 3.8e-19 68.6 57.6 1.3 1 0 0 1 1 1 1 Amino acid permease FUSC PF04632.12 gi|15922067|ref|NP_377736.1| - 0.0051 15.4 4.2 0.0051 15.4 4.2 2.4 2 0 0 2 2 2 2 Fusaric acid resistance protein family Polbeta PF18765.1 gi|15922068|ref|NP_377737.1| - 1.7e-11 44.1 1.4 2.2e-11 43.7 1.4 1.2 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase NTP_transf_2 PF01909.23 gi|15922068|ref|NP_377737.1| - 8.1e-10 38.9 1.8 9.6e-10 38.6 1.8 1.2 1 0 0 1 1 1 1 Nucleotidyltransferase domain EZH2_WD-Binding PF11616.8 gi|15922068|ref|NP_377737.1| - 0.072 13.2 0.3 16 5.7 0.0 2.3 2 0 0 2 2 2 0 WD repeat binding protein EZH2 Adenyl_cycl_N PF12633.7 gi|15922068|ref|NP_377737.1| - 0.16 11.9 0.0 0.17 11.8 0.0 1.1 1 0 0 1 1 1 0 Adenylate cyclase NT domain HEPN PF05168.14 gi|15922069|ref|NP_377738.1| - 1e-23 83.7 0.1 1.2e-23 83.4 0.1 1.0 1 0 0 1 1 1 1 HEPN domain Staph_opine_DH PF10100.9 gi|15922070|ref|NP_377739.1| - 0.06 12.0 0.1 8.9 4.8 0.0 2.4 3 0 0 3 3 3 0 Staphylopine dehydrogenase Sirohm_synth_C PF14823.6 gi|15922070|ref|NP_377739.1| - 0.11 12.2 0.1 41 3.9 0.0 3.4 3 1 0 3 3 3 0 Sirohaem biosynthesis protein C-terminal YlbE PF14003.6 gi|15922070|ref|NP_377739.1| - 0.12 12.8 1.3 1.4 9.4 0.1 2.7 2 0 0 2 2 2 0 YlbE-like protein PDDEXK_10 PF07788.11 gi|15922071|ref|NP_377740.1| - 4.6e-31 106.6 3.1 4.6e-31 106.6 3.1 2.7 2 1 1 3 3 3 1 PD-(D/E)XK nuclease superfamily DUF3782 PF12644.7 gi|15922071|ref|NP_377740.1| - 1.5e-24 86.0 14.4 1.6e-21 76.2 14.4 3.7 1 1 0 1 1 1 1 Protein of unknown function (DUF3782) DUF2730 PF10805.8 gi|15922071|ref|NP_377740.1| - 0.0037 17.3 16.8 0.089 12.9 0.6 3.4 1 1 2 3 3 3 2 Protein of unknown function (DUF2730) ScsC_N PF18312.1 gi|15922071|ref|NP_377740.1| - 0.011 15.5 0.5 1.5 8.7 0.1 3.1 1 1 1 2 2 2 0 Copper resistance protein ScsC N-terminal domain DUF1400 PF07176.11 gi|15922071|ref|NP_377740.1| - 0.027 14.7 5.4 0.61 10.4 1.0 2.6 1 1 1 2 2 2 0 Alpha/beta hydrolase of unknown function (DUF1400) FtsJ PF01728.19 gi|15922071|ref|NP_377740.1| - 0.057 13.5 0.6 1.2 9.2 0.6 2.5 1 1 0 1 1 1 0 FtsJ-like methyltransferase DUF3209 PF11483.8 gi|15922071|ref|NP_377740.1| - 0.062 13.8 9.7 4 7.9 4.3 3.3 1 1 2 3 3 3 0 Protein of unknown function (DUF3209) DUF2717 PF10911.8 gi|15922071|ref|NP_377740.1| - 0.078 12.7 0.9 67 3.3 0.0 4.0 5 0 0 5 5 5 0 Protein of unknown function (DUF2717) CNOT1_CAF1_bind PF16415.5 gi|15922071|ref|NP_377740.1| - 0.088 12.2 9.5 0.96 8.8 0.5 2.9 1 1 2 3 3 3 0 CCR4-NOT transcription complex subunit 1 CAF1-binding domain TraO PF10626.9 gi|15922071|ref|NP_377740.1| - 0.12 12.1 0.0 0.21 11.3 0.0 1.3 1 0 0 1 1 1 0 Conjugative transposon protein TraO dCache_1 PF02743.18 gi|15922071|ref|NP_377740.1| - 0.15 11.9 1.1 3 7.5 1.1 2.2 1 1 0 1 1 1 0 Cache domain Prominin PF05478.11 gi|15922071|ref|NP_377740.1| - 0.19 9.6 6.5 0.23 9.4 6.5 1.1 1 0 0 1 1 1 0 Prominin SF1-HH PF16275.5 gi|15922071|ref|NP_377740.1| - 0.73 10.2 13.4 2.3 8.6 1.7 3.4 2 1 2 4 4 4 0 Splicing factor 1 helix-hairpin domain CENP-O PF09496.10 gi|15922071|ref|NP_377740.1| - 1.8 8.5 6.7 3.1 7.7 6.7 1.3 1 0 0 1 1 1 0 Cenp-O kinetochore centromere component FANC_SAP PF18081.1 gi|15922071|ref|NP_377740.1| - 2.6 8.3 6.2 34 4.7 0.0 4.3 4 2 0 4 4 4 0 Fanconi anemia-associated nuclease SAP domain SLATT_1 PF18181.1 gi|15922071|ref|NP_377740.1| - 5.5 6.9 5.4 4.1 7.4 0.3 2.7 1 1 1 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 1 P2 PF07194.11 gi|15922071|ref|NP_377740.1| - 8.3 6.6 16.8 4.7 7.3 3.1 3.9 2 1 2 4 4 4 0 P2 response regulator binding domain UBA_4 PF14555.6 gi|15922072|ref|NP_377741.1| - 2.3 8.1 6.1 27 4.7 0.2 3.3 3 0 0 3 3 3 0 UBA-like domain CcdA PF07362.12 gi|15922074|ref|NP_377743.1| - 0.0036 17.7 0.7 0.0041 17.5 0.7 1.2 1 0 0 1 1 1 1 Post-segregation antitoxin CcdA AAA_18 PF13238.6 gi|15922076|ref|NP_377745.1| - 3.6e-06 27.5 0.0 0.083 13.4 0.0 3.2 2 0 0 2 2 2 2 AAA domain DUF648 PF04890.13 gi|15922076|ref|NP_377745.1| - 0.0012 18.6 0.1 0.033 14.0 0.0 2.5 2 0 0 2 2 2 1 Family of unknown function (DUF648) AAA_14 PF13173.6 gi|15922076|ref|NP_377745.1| - 0.0029 17.7 0.1 2.1 8.4 0.0 3.3 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.6 gi|15922076|ref|NP_377745.1| - 0.0056 17.1 0.0 3.9 7.8 0.0 2.6 2 0 0 2 2 2 2 AAA ATPase domain AAA_22 PF13401.6 gi|15922076|ref|NP_377745.1| - 0.014 15.7 0.0 3.2 8.0 0.0 2.9 2 0 0 2 2 2 0 AAA domain AAA_29 PF13555.6 gi|15922076|ref|NP_377745.1| - 0.02 14.7 0.1 0.73 9.6 0.0 2.4 2 0 0 2 2 2 0 P-loop containing region of AAA domain AAA PF00004.29 gi|15922076|ref|NP_377745.1| - 0.059 13.8 0.0 20 5.6 0.0 2.8 2 0 0 2 2 2 0 ATPase family associated with various cellular activities (AAA) DUF4806 PF16064.5 gi|15922076|ref|NP_377745.1| - 6 7.2 8.8 0.4 11.0 0.2 3.4 4 0 0 4 4 4 0 Domain of unknown function (DUF4806) DUF5510 PF17629.2 gi|15922077|ref|NP_377746.1| - 2.5 8.1 10.5 1.6 8.7 1.7 2.5 2 1 1 3 3 3 0 Family of unknown function (DUF5510) Band_7 PF01145.25 gi|15922078|ref|NP_377747.1| - 9.5e-20 71.3 0.5 1.8e-19 70.5 0.5 1.4 1 0 0 1 1 1 1 SPFH domain / Band 7 family Band_7_1 PF13421.6 gi|15922078|ref|NP_377747.1| - 6.6e-13 48.9 0.1 2e-12 47.3 0.1 1.7 1 1 0 1 1 1 1 SPFH domain-Band 7 family Vps53_N PF04100.12 gi|15922079|ref|NP_377748.1| - 0.031 13.3 0.1 0.031 13.3 0.1 1.7 2 0 0 2 2 2 0 Vps53-like, N-terminal PLU-1 PF08429.11 gi|15922079|ref|NP_377748.1| - 0.39 9.8 3.0 0.98 8.5 2.7 1.7 1 1 0 1 1 1 0 PLU-1-like protein DDE_Tnp_1 PF01609.21 gi|15922080|ref|NP_377749.1| - 2.9e-09 36.9 0.1 1.1e-08 35.0 0.0 2.0 1 1 1 2 2 2 1 Transposase DDE domain Aminoglyc_resit PF10706.9 gi|15922080|ref|NP_377749.1| - 0.056 13.2 0.0 0.092 12.5 0.0 1.3 1 0 0 1 1 1 0 Aminoglycoside-2''-adenylyltransferase ABC2_membrane PF01061.24 gi|15922082|ref|NP_377751.1| - 1.9e-37 128.7 22.2 1.9e-37 128.7 22.2 2.1 1 1 1 2 2 2 1 ABC-2 type transporter ABC2_membrane_3 PF12698.7 gi|15922082|ref|NP_377751.1| - 1e-13 51.2 25.6 1e-13 51.2 25.6 1.8 1 1 1 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_2 PF12679.7 gi|15922082|ref|NP_377751.1| - 2.1e-05 24.0 27.2 9.1e-05 21.9 27.2 2.2 1 1 0 1 1 1 1 ABC-2 family transporter protein ABC2_membrane_4 PF12730.7 gi|15922082|ref|NP_377751.1| - 0.00024 21.1 12.0 0.00024 21.1 12.0 2.4 2 1 0 2 2 2 1 ABC-2 family transporter protein ABC2_membrane_5 PF13346.6 gi|15922082|ref|NP_377751.1| - 0.001 18.7 14.6 0.001 18.7 14.6 2.2 1 1 0 1 1 1 1 ABC-2 family transporter protein EMP70 PF02990.16 gi|15922082|ref|NP_377751.1| - 0.015 14.0 0.4 0.015 14.0 0.4 2.1 1 1 1 2 2 2 0 Endomembrane protein 70 ABC_tran PF00005.27 gi|15922083|ref|NP_377752.1| - 4.2e-33 114.8 0.0 7.7e-33 113.9 0.0 1.4 1 0 0 1 1 1 1 ABC transporter DUF4162 PF13732.6 gi|15922083|ref|NP_377752.1| - 2.7e-15 56.8 0.3 6.4e-15 55.6 0.3 1.7 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_21 PF13304.6 gi|15922083|ref|NP_377752.1| - 1.5e-11 44.7 0.1 1.3e-07 31.7 0.0 2.3 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_23 PF13476.6 gi|15922083|ref|NP_377752.1| - 9.6e-05 23.0 0.8 0.00016 22.2 0.1 1.7 2 1 0 2 2 2 1 AAA domain SMC_N PF02463.19 gi|15922083|ref|NP_377752.1| - 0.00036 20.0 0.0 0.0026 17.2 0.0 2.2 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|15922083|ref|NP_377752.1| - 0.001 18.8 0.1 0.002 17.8 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_15 PF13175.6 gi|15922083|ref|NP_377752.1| - 0.0017 18.1 0.2 0.37 10.4 0.0 2.4 2 1 0 2 2 2 2 AAA ATPase domain AAA PF00004.29 gi|15922083|ref|NP_377752.1| - 0.026 14.9 0.3 0.42 11.0 0.3 2.5 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Thymidylate_kin PF02223.17 gi|15922083|ref|NP_377752.1| - 0.044 13.5 0.1 4.2 7.0 0.0 2.5 2 0 0 2 2 2 0 Thymidylate kinase AAA_27 PF13514.6 gi|15922083|ref|NP_377752.1| - 0.095 12.3 0.0 0.16 11.5 0.0 1.3 1 0 0 1 1 1 0 AAA domain Rad17 PF03215.15 gi|15922083|ref|NP_377752.1| - 0.1 12.5 0.0 0.15 12.0 0.0 1.3 1 0 0 1 1 1 0 Rad17 P-loop domain MukB PF04310.12 gi|15922083|ref|NP_377752.1| - 0.11 12.3 0.1 0.88 9.3 0.1 2.2 1 1 1 2 2 2 0 MukB N-terminal RsgA_GTPase PF03193.16 gi|15922083|ref|NP_377752.1| - 0.11 12.4 0.0 0.27 11.1 0.0 1.7 1 0 0 1 1 1 0 RsgA GTPase PadR PF03551.14 gi|15922084|ref|NP_377753.1| - 1.2e-10 41.2 0.0 2.4e-10 40.2 0.0 1.5 1 1 0 1 1 1 1 Transcriptional regulator PadR-like family HTH_45 PF14947.6 gi|15922084|ref|NP_377753.1| - 0.015 15.3 1.0 0.024 14.6 0.1 1.8 2 0 0 2 2 2 0 Winged helix-turn-helix HemN_C PF06969.16 gi|15922084|ref|NP_377753.1| - 0.079 13.0 0.0 0.21 11.7 0.0 1.7 1 0 0 1 1 1 0 HemN C-terminal domain Mrr_N PF14338.6 gi|15922084|ref|NP_377753.1| - 0.15 12.2 0.1 0.46 10.7 0.0 1.9 2 0 0 2 2 2 0 Mrr N-terminal domain CBS PF00571.28 gi|15922085|ref|NP_377754.1| - 4e-25 88.0 2.4 3.4e-12 46.6 0.5 2.1 2 0 0 2 2 2 2 CBS domain GDI PF00996.18 gi|15922085|ref|NP_377754.1| - 0.0093 14.5 0.6 0.34 9.4 0.0 2.0 2 0 0 2 2 2 2 GDP dissociation inhibitor Acetyltransf_10 PF13673.7 gi|15922085|ref|NP_377754.1| - 0.099 12.6 0.1 0.92 9.5 0.0 2.0 2 0 0 2 2 2 0 Acetyltransferase (GNAT) domain ETF_QO PF05187.13 gi|15922086|ref|NP_377755.1| - 1e-13 51.3 1.9 1.4e-13 50.9 1.9 1.1 1 0 0 1 1 1 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_10 PF13237.6 gi|15922086|ref|NP_377755.1| - 1.7e-07 31.2 23.0 5.4e-05 23.2 13.4 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15922086|ref|NP_377755.1| - 2.4e-07 30.4 9.9 0.0011 18.9 1.2 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|15922086|ref|NP_377755.1| - 5.9e-07 29.5 9.4 8.5e-07 29.0 9.3 1.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15922086|ref|NP_377755.1| - 1.6e-06 28.6 11.3 0.00011 22.7 12.2 2.1 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15922086|ref|NP_377755.1| - 5.2e-06 26.3 15.5 0.00019 21.3 3.0 2.6 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4 PF00037.27 gi|15922086|ref|NP_377755.1| - 3e-05 23.6 4.4 3e-05 23.6 4.4 3.0 3 0 0 3 3 3 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|15922086|ref|NP_377755.1| - 6.2e-05 23.4 7.3 0.0072 16.8 0.7 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15922086|ref|NP_377755.1| - 9.1e-05 22.7 13.0 0.00034 20.9 2.6 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain CxC3 PF18804.1 gi|15922086|ref|NP_377755.1| - 0.016 15.0 1.9 0.02 14.8 1.9 1.1 1 0 0 1 1 1 0 CxC3 like cysteine cluster associated with KDZ transposases Fer4_16 PF13484.6 gi|15922086|ref|NP_377755.1| - 0.018 16.0 15.5 0.021 15.8 2.5 2.7 1 1 2 3 3 3 0 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|15922086|ref|NP_377755.1| - 0.026 14.7 13.9 0.085 13.0 13.9 2.0 1 1 0 1 1 1 0 4Fe-4S dicluster domain DUF678 PF05077.12 gi|15922086|ref|NP_377755.1| - 0.062 13.4 2.5 0.084 13.0 2.5 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF678) Fer4_3 PF12798.7 gi|15922086|ref|NP_377755.1| - 0.075 14.0 15.1 0.64 11.1 3.9 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_17 PF13534.6 gi|15922086|ref|NP_377755.1| - 0.11 13.0 3.0 0.11 13.0 3.0 2.3 1 1 0 2 2 2 0 4Fe-4S dicluster domain GP41 PF00517.17 gi|15922086|ref|NP_377755.1| - 0.11 12.4 0.1 0.13 12.1 0.1 1.2 1 0 0 1 1 1 0 Retroviral envelope protein Vps39_2 PF10367.9 gi|15922086|ref|NP_377755.1| - 0.66 10.4 4.7 0.11 13.0 1.3 1.5 1 1 1 2 2 2 0 Vacuolar sorting protein 39 domain 2 Fer4_18 PF13746.6 gi|15922086|ref|NP_377755.1| - 0.84 9.9 10.7 1.8 8.8 1.6 2.1 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_20 PF14691.6 gi|15922086|ref|NP_377755.1| - 1 9.1 11.3 1.7 8.5 3.0 2.1 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DAO PF01266.24 gi|15922087|ref|NP_377756.1| - 9.9e-16 58.3 0.0 1.9e-07 31.0 0.0 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|15922087|ref|NP_377756.1| - 8.7e-09 35.5 0.1 1.8e-08 34.5 0.1 1.5 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain HI0933_like PF03486.14 gi|15922087|ref|NP_377756.1| - 2e-08 33.4 0.6 2.6e-06 26.4 0.1 2.1 2 0 0 2 2 2 2 HI0933-like protein Pyr_redox_2 PF07992.14 gi|15922087|ref|NP_377756.1| - 3.3e-08 33.1 0.6 9.7e-08 31.6 0.6 1.8 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|15922087|ref|NP_377756.1| - 1e-06 28.2 0.0 1.8e-06 27.4 0.0 1.4 1 0 0 1 1 1 1 Thi4 family GIDA PF01134.22 gi|15922087|ref|NP_377756.1| - 4.3e-06 26.1 1.0 3.1e-05 23.2 1.0 2.0 1 1 0 1 1 1 1 Glucose inhibited division protein A Pyr_redox PF00070.27 gi|15922087|ref|NP_377756.1| - 4.7e-06 27.1 0.2 0.0023 18.4 0.0 2.6 1 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase FAD_oxidored PF12831.7 gi|15922087|ref|NP_377756.1| - 1.3e-05 24.7 0.1 4e-05 23.1 0.1 1.6 1 1 1 2 2 2 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|15922087|ref|NP_377756.1| - 1.5e-05 24.3 0.1 2.3e-05 23.7 0.1 1.2 1 0 0 1 1 1 1 FAD binding domain FAD_binding_3 PF01494.19 gi|15922087|ref|NP_377756.1| - 3.8e-05 23.1 0.1 0.00014 21.2 0.1 2.0 1 1 0 1 1 1 1 FAD binding domain Pyr_redox_3 PF13738.6 gi|15922087|ref|NP_377756.1| - 0.00018 20.9 1.2 0.001 18.4 1.2 2.0 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 gi|15922087|ref|NP_377756.1| - 0.00045 19.4 0.0 0.00064 18.9 0.0 1.2 1 0 0 1 1 1 1 Lycopene cyclase protein 3HCDH_N PF02737.18 gi|15922087|ref|NP_377756.1| - 0.013 15.4 0.0 0.02 14.8 0.0 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ApbA PF02558.16 gi|15922087|ref|NP_377756.1| - 0.037 13.7 0.0 0.059 13.0 0.0 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA NAD_binding_9 PF13454.6 gi|15922087|ref|NP_377756.1| - 0.045 13.8 0.0 0.27 11.2 0.0 2.1 1 1 0 1 1 1 0 FAD-NAD(P)-binding FBA_2 PF07735.17 gi|15922087|ref|NP_377756.1| - 0.14 12.3 0.0 0.3 11.2 0.0 1.5 1 0 0 1 1 1 0 F-box associated ETF PF01012.21 gi|15922088|ref|NP_377757.1| - 5e-83 277.5 0.0 1.3e-44 152.3 0.0 2.2 2 0 0 2 2 2 2 Electron transfer flavoprotein domain ETF_alpha PF00766.19 gi|15922088|ref|NP_377757.1| - 2.6e-33 113.9 0.3 4.8e-33 113.0 0.3 1.5 1 0 0 1 1 1 1 Electron transfer flavoprotein FAD-binding domain OrfB_Zn_ribbon PF07282.11 gi|15922089|ref|NP_377758.1| - 5.4e-22 77.5 0.4 6.6e-22 77.2 0.4 1.1 1 0 0 1 1 1 1 Putative transposase DNA-binding domain zinc_ribbon_2 PF13240.6 gi|15922089|ref|NP_377758.1| - 0.022 14.5 0.4 0.31 10.8 0.1 2.2 2 0 0 2 2 2 0 zinc-ribbon domain Tsg PF04668.12 gi|15922089|ref|NP_377758.1| - 0.072 13.8 0.9 0.086 13.5 0.9 1.1 1 0 0 1 1 1 0 Twisted gastrulation (Tsg) protein conserved region C1_2 PF03107.16 gi|15922089|ref|NP_377758.1| - 0.082 13.2 0.5 0.12 12.7 0.5 1.2 1 0 0 1 1 1 0 C1 domain OrfB_IS605 PF01385.19 gi|15922090|ref|NP_377759.1| - 0.0089 16.2 0.2 0.02 15.1 0.2 1.6 1 0 0 1 1 1 1 Probable transposase LytTR PF04397.15 gi|15922090|ref|NP_377759.1| - 0.014 15.6 0.4 0.056 13.7 0.2 2.0 2 0 0 2 2 2 0 LytTr DNA-binding domain DUF608 PF04685.13 gi|15922090|ref|NP_377759.1| - 0.21 10.7 1.9 2.2 7.4 0.4 2.1 2 0 0 2 2 2 0 Glycosyl-hydrolase family 116, catalytic region Transposase_20 PF02371.16 gi|15922091|ref|NP_377760.1| - 9e-25 86.8 0.0 1.5e-24 86.1 0.0 1.4 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family DEDD_Tnp_IS110 PF01548.17 gi|15922091|ref|NP_377760.1| - 2.1e-06 27.7 0.1 8.2e-06 25.8 0.0 2.0 2 1 0 2 2 2 1 Transposase DUF445 PF04286.12 gi|15922091|ref|NP_377760.1| - 0.042 13.7 0.3 0.059 13.2 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF445) XTBD PF11952.8 gi|15922091|ref|NP_377760.1| - 0.088 12.6 0.3 0.25 11.1 0.1 1.9 2 0 0 2 2 2 0 XRN-Two Binding Domain, XTBD TFIIB_C_1 PF18542.1 gi|15922091|ref|NP_377760.1| - 0.11 12.6 0.1 2.5 8.2 0.1 2.3 2 0 0 2 2 2 0 Transcription factor IIB C-terminal module 1 PRiA4_ORF3 PF07929.11 gi|15922092|ref|NP_377761.1| - 7.2e-11 42.1 0.0 9.2e-11 41.7 0.0 1.1 1 0 0 1 1 1 1 Plasmid pRiA4b ORF-3-like protein zf-UBR PF02207.20 gi|15922092|ref|NP_377761.1| - 0.0072 16.5 8.3 0.4 10.9 8.3 2.5 1 1 0 1 1 1 1 Putative zinc finger in N-recognin (UBR box) C1_2 PF03107.16 gi|15922092|ref|NP_377761.1| - 7.7 6.9 11.8 4.2 7.8 5.7 2.7 2 1 0 2 2 2 0 C1 domain Ald_Xan_dh_C2 PF02738.18 gi|15922093|ref|NP_377762.1| - 8e-159 529.6 0.2 9.2e-159 529.4 0.2 1.0 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 gi|15922093|ref|NP_377762.1| - 1.5e-26 92.9 0.0 5.6e-26 91.1 0.0 2.1 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ECR1_N PF14382.6 gi|15922093|ref|NP_377762.1| - 0.026 14.3 0.3 0.73 9.7 0.0 2.7 2 0 0 2 2 2 0 Exosome complex exonuclease RRP4 N-terminal region Fer2_2 PF01799.20 gi|15922094|ref|NP_377763.1| - 2.9e-32 110.5 2.7 3.5e-32 110.2 0.1 1.9 2 0 0 2 2 2 1 [2Fe-2S] binding domain Fer2_3 PF13085.6 gi|15922094|ref|NP_377763.1| - 0.00045 20.2 1.7 0.00045 20.2 1.7 1.4 1 1 0 1 1 1 1 2Fe-2S iron-sulfur cluster binding domain Fer2 PF00111.27 gi|15922094|ref|NP_377763.1| - 0.0013 18.6 0.6 0.0013 18.6 0.6 2.0 2 0 0 2 2 2 1 2Fe-2S iron-sulfur cluster binding domain Peptidase_M60_C PF18630.1 gi|15922094|ref|NP_377763.1| - 0.12 12.5 0.0 0.22 11.6 0.0 1.4 1 0 0 1 1 1 0 Peptidase M60 C-terminal domain FAD_binding_5 PF00941.21 gi|15922095|ref|NP_377764.1| - 4.6e-47 159.9 0.0 8.2e-47 159.1 0.0 1.4 2 0 0 2 2 2 1 FAD binding domain in molybdopterin dehydrogenase CO_deh_flav_C PF03450.17 gi|15922095|ref|NP_377764.1| - 1.3e-19 70.3 0.0 2e-19 69.7 0.0 1.3 1 0 0 1 1 1 1 CO dehydrogenase flavoprotein C-terminal domain Rhodanese PF00581.20 gi|15922096|ref|NP_377765.1| - 6e-37 126.4 0.1 1.6e-18 67.2 0.0 2.1 2 0 0 2 2 2 2 Rhodanese-like domain DUF442 PF04273.13 gi|15922096|ref|NP_377765.1| - 0.16 12.1 0.0 0.27 11.3 0.0 1.3 1 0 0 1 1 1 0 Putative phosphatase (DUF442) AhpC-TSA PF00578.21 gi|15922097|ref|NP_377766.1| - 2.1e-40 137.5 0.1 2.5e-40 137.3 0.1 1.0 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|15922097|ref|NP_377766.1| - 5.9e-29 100.7 0.1 6.9e-29 100.5 0.1 1.0 1 0 0 1 1 1 1 Redoxin SCO1-SenC PF02630.14 gi|15922097|ref|NP_377766.1| - 0.00034 20.6 0.1 0.00052 19.9 0.1 1.5 1 1 0 1 1 1 1 SCO1/SenC Thioredoxin_8 PF13905.6 gi|15922097|ref|NP_377766.1| - 0.0037 17.5 1.0 0.0065 16.8 1.0 1.4 1 1 0 1 1 1 1 Thioredoxin-like AhpC-TSA_2 PF13911.6 gi|15922097|ref|NP_377766.1| - 0.0056 16.8 0.0 3.3 7.9 0.0 2.1 1 1 1 2 2 2 2 AhpC/TSA antioxidant enzyme FtsJ PF01728.19 gi|15922097|ref|NP_377766.1| - 0.09 12.9 0.0 0.096 12.8 0.0 1.2 1 0 0 1 1 1 0 FtsJ-like methyltransferase HpcH_HpaI PF03328.14 gi|15922098|ref|NP_377767.1| - 4e-34 117.7 0.0 2e-32 112.2 0.0 2.1 1 1 0 1 1 1 1 HpcH/HpaI aldolase/citrate lyase family C-C_Bond_Lyase PF15617.6 gi|15922098|ref|NP_377767.1| - 3.5e-14 52.7 0.2 5.4e-08 32.4 0.0 2.1 2 0 0 2 2 2 2 C-C_Bond_Lyase of the TIM-Barrel fold TPP_enzyme_C PF02775.21 gi|15922099|ref|NP_377768.1| - 1.6e-24 86.5 0.6 2e-24 86.1 0.6 1.1 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain E1_dh PF00676.20 gi|15922099|ref|NP_377768.1| - 0.0033 16.4 0.7 0.0046 15.9 0.7 1.2 1 0 0 1 1 1 1 Dehydrogenase E1 component DXP_synthase_N PF13292.6 gi|15922099|ref|NP_377768.1| - 0.0067 15.7 0.3 0.011 14.9 0.3 1.4 1 1 0 1 1 1 1 1-deoxy-D-xylulose-5-phosphate synthase CGGC PF08821.11 gi|15922099|ref|NP_377768.1| - 0.18 12.0 0.0 0.38 11.0 0.0 1.5 1 0 0 1 1 1 0 CGGC domain POR_N PF01855.19 gi|15922100|ref|NP_377769.1| - 4.2e-70 236.1 0.3 5.4e-70 235.7 0.3 1.1 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg PFOR_II PF17147.4 gi|15922100|ref|NP_377769.1| - 1e-21 77.2 0.0 2.7e-21 75.8 0.0 1.8 2 0 0 2 2 2 1 Pyruvate:ferredoxin oxidoreductase core domain II Transketolase_C PF02780.20 gi|15922100|ref|NP_377769.1| - 1.4e-05 24.9 0.0 3.1e-05 23.9 0.0 1.6 1 0 0 1 1 1 1 Transketolase, C-terminal domain TPP_enzyme_N PF02776.18 gi|15922100|ref|NP_377769.1| - 0.0014 18.3 0.2 0.0021 17.7 0.2 1.3 1 0 0 1 1 1 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain SHOCT PF09851.9 gi|15922100|ref|NP_377769.1| - 0.14 11.9 0.1 0.81 9.5 0.6 2.1 2 0 0 2 2 2 0 Short C-terminal domain POR PF01558.18 gi|15922101|ref|NP_377770.1| - 1.9e-11 44.3 0.0 2.1e-11 44.2 0.0 1.0 1 0 0 1 1 1 1 Pyruvate ferredoxin/flavodoxin oxidoreductase Fer4_11 PF13247.6 gi|15922102|ref|NP_377771.1| - 8.3e-21 74.0 8.1 8.3e-21 74.0 8.1 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain DmsC PF04976.12 gi|15922102|ref|NP_377771.1| - 2e-12 47.2 9.5 2e-12 47.2 9.5 2.0 1 1 1 2 2 2 1 DMSO reductase anchor subunit (DmsC) Fer4 PF00037.27 gi|15922102|ref|NP_377771.1| - 5e-12 45.1 36.6 5.4e-05 22.8 4.4 5.3 6 0 0 6 6 6 4 4Fe-4S binding domain Fer4_7 PF12838.7 gi|15922102|ref|NP_377771.1| - 3.3e-11 43.6 24.7 1.2e-05 25.8 9.3 3.2 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15922102|ref|NP_377771.1| - 2.4e-10 40.0 37.2 0.00029 20.8 3.4 4.9 4 1 0 4 4 4 3 4Fe-4S binding domain Fer4_9 PF13187.6 gi|15922102|ref|NP_377771.1| - 5.8e-10 39.2 22.9 4.9e-05 23.4 10.7 3.3 2 1 1 3 3 3 3 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15922102|ref|NP_377771.1| - 1.4e-09 37.9 31.2 1.2e-05 25.3 8.6 3.3 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15922102|ref|NP_377771.1| - 4.2e-09 35.9 29.0 0.00016 21.5 1.5 4.4 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_3 PF12798.7 gi|15922102|ref|NP_377771.1| - 3.2e-05 24.6 39.7 0.066 14.2 5.9 4.3 4 0 0 4 4 4 3 4Fe-4S binding domain Fer4_21 PF14697.6 gi|15922102|ref|NP_377771.1| - 0.00019 21.5 30.1 0.0088 16.2 11.7 3.3 1 1 2 3 3 3 3 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15922102|ref|NP_377771.1| - 0.0016 19.4 34.7 0.19 12.7 2.3 4.8 3 1 2 5 5 5 3 4Fe-4S double cluster binding domain Fer4_13 PF13370.6 gi|15922102|ref|NP_377771.1| - 0.0018 18.8 21.7 0.024 15.2 1.3 4.6 4 1 0 4 4 4 1 4Fe-4S single cluster domain of Ferredoxin I Fer4_4 PF12800.7 gi|15922102|ref|NP_377771.1| - 0.0038 17.6 32.2 0.11 13.1 3.3 4.3 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|15922102|ref|NP_377771.1| - 0.0063 17.0 27.1 1.3 9.6 0.7 4.4 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|15922102|ref|NP_377771.1| - 0.044 14.0 0.7 0.044 14.0 0.7 3.4 1 1 3 4 4 4 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|15922102|ref|NP_377771.1| - 0.1 13.4 12.8 1.3 9.8 0.4 3.8 4 0 0 4 4 4 0 4Fe-4S single cluster domain Fer4_8 PF13183.6 gi|15922102|ref|NP_377771.1| - 1.2 9.6 33.0 11 6.6 9.9 4.1 2 2 1 3 3 3 0 4Fe-4S dicluster domain 4HBT PF03061.22 gi|15922103|ref|NP_377772.1| - 1.2e-11 44.7 0.1 1.8e-11 44.2 0.1 1.2 1 0 0 1 1 1 1 Thioesterase superfamily 4HBT_3 PF13622.6 gi|15922103|ref|NP_377772.1| - 0.24 11.6 0.0 0.28 11.4 0.0 1.1 1 0 0 1 1 1 0 Thioesterase-like superfamily Acyl-CoA_dh_1 PF00441.24 gi|15922104|ref|NP_377773.1| - 5.3e-35 120.8 0.8 8.8e-35 120.1 0.8 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|15922104|ref|NP_377773.1| - 8.7e-28 97.3 0.0 2.4e-27 95.9 0.0 1.8 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_M PF02770.19 gi|15922104|ref|NP_377773.1| - 1.3e-21 76.6 0.1 2.4e-21 75.7 0.1 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|15922104|ref|NP_377773.1| - 3e-15 56.7 0.1 5.5e-15 55.8 0.1 1.5 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain CBM39 PF15886.5 gi|15922104|ref|NP_377773.1| - 0.012 15.5 0.0 0.025 14.4 0.0 1.7 1 0 0 1 1 1 0 Carbohydrate binding domain (family 32) DUF1324 PF07038.11 gi|15922105|ref|NP_377774.1| - 0.026 14.8 0.3 0.048 13.9 0.3 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1324) ETF PF01012.21 gi|15922106|ref|NP_377775.1| - 2.5e-35 122.0 0.1 3.3e-35 121.6 0.1 1.1 1 0 0 1 1 1 1 Electron transfer flavoprotein domain ETF_alpha PF00766.19 gi|15922107|ref|NP_377776.1| - 4.5e-35 119.5 0.5 2e-33 114.3 0.1 3.0 3 0 0 3 3 3 1 Electron transfer flavoprotein FAD-binding domain ETF PF01012.21 gi|15922107|ref|NP_377776.1| - 7.9e-15 55.2 0.1 1.5e-14 54.3 0.1 1.4 1 0 0 1 1 1 1 Electron transfer flavoprotein domain IMS PF00817.20 gi|15922107|ref|NP_377776.1| - 0.032 14.2 0.2 0.14 12.2 0.0 1.9 2 0 0 2 2 2 0 impB/mucB/samB family DUF2244 PF10003.9 gi|15922107|ref|NP_377776.1| - 0.19 11.4 0.1 0.27 10.9 0.1 1.2 1 0 0 1 1 1 0 Integral membrane protein (DUF2244) Spc24 PF08286.11 gi|15922107|ref|NP_377776.1| - 0.65 10.3 3.1 5 7.4 0.3 2.9 3 0 0 3 3 3 0 Spc24 subunit of Ndc80 DAO PF01266.24 gi|15922108|ref|NP_377777.1| - 2.9e-12 46.8 0.2 1e-05 25.3 0.3 2.1 1 1 1 2 2 2 2 FAD dependent oxidoreductase FAD_oxidored PF12831.7 gi|15922108|ref|NP_377777.1| - 4.7e-12 46.0 0.0 7.6e-12 45.3 0.0 1.3 1 0 0 1 1 1 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|15922108|ref|NP_377777.1| - 1.8e-09 37.2 0.2 3.4e-09 36.3 0.2 1.4 1 0 0 1 1 1 1 FAD binding domain FAD_binding_3 PF01494.19 gi|15922108|ref|NP_377777.1| - 3.3e-07 29.9 0.0 5.7e-07 29.1 0.0 1.5 1 1 0 1 1 1 1 FAD binding domain HI0933_like PF03486.14 gi|15922108|ref|NP_377777.1| - 3.6e-07 29.3 0.4 1.7e-06 27.0 0.1 2.1 2 1 0 2 2 2 1 HI0933-like protein Pyr_redox_3 PF13738.6 gi|15922108|ref|NP_377777.1| - 1.6e-06 27.6 2.0 0.011 15.0 1.3 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Thi4 PF01946.17 gi|15922108|ref|NP_377777.1| - 1e-05 24.9 0.5 3.5e-05 23.2 0.4 1.8 2 0 0 2 2 2 1 Thi4 family Trp_halogenase PF04820.14 gi|15922108|ref|NP_377777.1| - 1.6e-05 24.0 0.8 0.0047 15.8 0.0 3.0 2 1 1 3 3 3 1 Tryptophan halogenase NAD_binding_8 PF13450.6 gi|15922108|ref|NP_377777.1| - 2.4e-05 24.5 1.5 0.00017 21.7 0.9 2.3 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Pyr_redox_2 PF07992.14 gi|15922108|ref|NP_377777.1| - 0.00013 21.3 0.1 0.0013 18.0 0.2 2.0 1 1 1 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 gi|15922108|ref|NP_377777.1| - 0.00017 20.8 0.3 0.0015 17.6 0.3 2.0 1 1 0 1 1 1 1 Lycopene cyclase protein GIDA PF01134.22 gi|15922108|ref|NP_377777.1| - 0.00085 18.5 1.9 0.0012 18.0 0.4 1.9 2 0 0 2 2 2 1 Glucose inhibited division protein A Pyr_redox PF00070.27 gi|15922108|ref|NP_377777.1| - 0.0095 16.5 0.6 0.25 11.9 0.8 2.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|15922108|ref|NP_377777.1| - 0.13 11.5 0.8 0.21 10.9 0.1 1.6 2 0 0 2 2 2 0 Alanine dehydrogenase/PNT, C-terminal domain Fer4_10 PF13237.6 gi|15922109|ref|NP_377778.1| - 3.3e-06 27.1 7.2 4.5e-06 26.7 7.2 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15922109|ref|NP_377778.1| - 5.2e-06 26.5 5.3 6.7e-06 26.2 5.3 1.2 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15922109|ref|NP_377778.1| - 5.7e-06 26.1 10.2 0.00013 21.8 4.3 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_7 PF12838.7 gi|15922109|ref|NP_377778.1| - 3.4e-05 24.3 5.4 0.0012 19.4 6.5 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain ETF_QO PF05187.13 gi|15922109|ref|NP_377778.1| - 0.00022 21.3 3.3 0.0012 19.0 3.5 1.8 1 1 1 2 2 2 1 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S Fer4_6 PF12837.7 gi|15922109|ref|NP_377778.1| - 0.0005 20.0 11.8 0.0045 17.0 2.9 2.8 2 1 0 2 2 2 2 4Fe-4S binding domain Fer4_11 PF13247.6 gi|15922109|ref|NP_377778.1| - 0.00065 19.8 1.3 0.00081 19.5 1.3 1.1 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|15922109|ref|NP_377778.1| - 0.0046 17.4 2.2 0.78 10.2 0.5 2.1 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15922109|ref|NP_377778.1| - 0.0069 16.5 7.4 0.022 14.9 7.4 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15922109|ref|NP_377778.1| - 0.01 16.7 4.4 3.2 8.7 1.9 2.2 2 0 0 2 2 2 0 4Fe-4S double cluster binding domain Fer4_20 PF14691.6 gi|15922109|ref|NP_377778.1| - 0.018 14.8 6.6 0.17 11.6 2.6 2.1 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DUF4679 PF15728.5 gi|15922109|ref|NP_377778.1| - 0.16 11.0 0.5 0.16 10.9 0.5 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4679) Fer4_4 PF12800.7 gi|15922109|ref|NP_377778.1| - 0.4 11.3 11.7 1.5 9.5 2.5 2.7 2 1 0 2 2 2 0 4Fe-4S binding domain Fer4 PF00037.27 gi|15922109|ref|NP_377778.1| - 0.64 9.9 15.4 3.9 7.5 0.1 4.1 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_3 PF12798.7 gi|15922109|ref|NP_377778.1| - 0.88 10.7 11.8 6.9 7.9 3.9 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain AMP-binding PF00501.28 gi|15922110|ref|NP_377779.1| - 6.6e-71 239.1 0.0 8.7e-71 238.7 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|15922110|ref|NP_377779.1| - 4.3e-17 62.9 0.1 9.6e-17 61.7 0.1 1.6 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain ACAS_N PF16177.5 gi|15922110|ref|NP_377779.1| - 8.1e-11 41.7 0.6 8.1e-11 41.7 0.6 2.1 2 0 0 2 2 2 1 Acetyl-coenzyme A synthetase N-terminus DUF35_N PF12172.8 gi|15922111|ref|NP_377780.1| - 4e-10 39.4 0.1 5.8e-10 38.8 0.1 1.2 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) OB_aCoA_assoc PF01796.17 gi|15922111|ref|NP_377780.1| - 9.9e-07 28.7 0.0 1.6e-06 28.0 0.0 1.3 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated DZR PF12773.7 gi|15922111|ref|NP_377780.1| - 0.089 12.8 0.2 0.13 12.3 0.2 1.2 1 0 0 1 1 1 0 Double zinc ribbon Thioredoxin_3 PF13192.6 gi|15922111|ref|NP_377780.1| - 0.1 12.7 0.3 0.21 11.7 0.3 1.5 1 0 0 1 1 1 0 Thioredoxin domain zinc_ribbon_2 PF13240.6 gi|15922111|ref|NP_377780.1| - 0.11 12.3 2.9 0.2 11.4 2.9 1.5 1 0 0 1 1 1 0 zinc-ribbon domain NMD3 PF04981.13 gi|15922111|ref|NP_377780.1| - 0.13 11.7 0.4 0.17 11.3 0.4 1.2 1 0 0 1 1 1 0 NMD3 family zf-C6H2 PF15801.5 gi|15922111|ref|NP_377780.1| - 0.19 12.1 0.9 0.33 11.3 0.9 1.3 1 0 0 1 1 1 0 zf-MYND-like zinc finger, mRNA-binding DUF35_N PF12172.8 gi|15922112|ref|NP_377781.1| - 2.3e-09 36.9 0.3 4.1e-09 36.1 0.3 1.3 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) OB_aCoA_assoc PF01796.17 gi|15922112|ref|NP_377781.1| - 0.0015 18.5 0.1 0.003 17.5 0.1 1.5 1 1 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated NMD3 PF04981.13 gi|15922112|ref|NP_377781.1| - 0.083 12.3 0.4 0.12 11.8 0.4 1.2 1 0 0 1 1 1 0 NMD3 family ADK_lid PF05191.14 gi|15922112|ref|NP_377781.1| - 0.67 10.0 4.9 1.6 8.7 4.9 1.6 1 0 0 1 1 1 0 Adenylate kinase, active site lid Thiolase_N PF00108.23 gi|15922113|ref|NP_377782.1| - 1.7e-09 37.4 0.2 1.4e-05 24.6 0.0 2.5 2 1 0 2 2 2 2 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|15922113|ref|NP_377782.1| - 0.00097 18.8 0.0 1.2 8.8 0.0 2.6 2 1 0 2 2 2 2 Thiolase, C-terminal domain Peptidase_M22 PF00814.25 gi|15922113|ref|NP_377782.1| - 0.11 12.2 0.0 0.21 11.3 0.0 1.4 1 0 0 1 1 1 0 Glycoprotease family Thiolase_C PF02803.18 gi|15922114|ref|NP_377783.1| - 0.005 16.5 0.0 0.01 15.5 0.0 1.5 1 0 0 1 1 1 1 Thiolase, C-terminal domain PIN PF01850.21 gi|15922115|ref|NP_377784.1| - 1.7e-06 28.5 0.3 2.3e-06 28.1 0.3 1.2 1 0 0 1 1 1 1 PIN domain Acyl-CoA_dh_1 PF00441.24 gi|15922116|ref|NP_377785.1| - 1.2e-38 132.7 0.1 1.8e-38 132.1 0.1 1.3 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|15922116|ref|NP_377785.1| - 3.4e-20 72.0 0.0 5.9e-20 71.3 0.0 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_N PF02771.16 gi|15922116|ref|NP_377785.1| - 6.2e-17 62.3 0.0 2.2e-16 60.5 0.0 2.0 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Acyl-CoA_dh_2 PF08028.11 gi|15922116|ref|NP_377785.1| - 1.1e-10 41.9 0.0 1.6e-09 38.1 0.0 2.6 2 1 0 2 2 2 1 Acyl-CoA dehydrogenase, C-terminal domain DUF1016_N PF17761.1 gi|15922116|ref|NP_377785.1| - 0.087 13.0 0.1 0.15 12.2 0.1 1.3 1 0 0 1 1 1 0 DUF1016 N-terminal domain AMP-binding PF00501.28 gi|15922117|ref|NP_377786.1| - 2.1e-72 244.1 0.0 2.6e-72 243.7 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme ACAS_N PF16177.5 gi|15922117|ref|NP_377786.1| - 1e-14 54.2 0.4 2e-14 53.2 0.4 1.5 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus AMP-binding_C PF13193.6 gi|15922117|ref|NP_377786.1| - 2.4e-14 54.0 0.5 6e-14 52.8 0.5 1.7 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain Amidohydro_2 PF04909.14 gi|15922118|ref|NP_377787.1| - 9.6e-44 150.3 0.0 1.1e-43 150.2 0.0 1.0 1 0 0 1 1 1 1 Amidohydrolase Citrate_synt PF00285.21 gi|15922119|ref|NP_377788.1| - 6.8e-117 390.5 0.0 7.8e-117 390.4 0.0 1.0 1 0 0 1 1 1 1 Citrate synthase, C-terminal domain CBS PF00571.28 gi|15922120|ref|NP_377789.1| - 6.1e-27 93.8 2.2 5e-13 49.3 0.3 2.1 2 0 0 2 2 2 2 CBS domain PEP_mutase PF13714.6 gi|15922122|ref|NP_377791.1| - 3.3e-48 164.2 0.9 3.8e-48 164.0 0.9 1.1 1 0 0 1 1 1 1 Phosphoenolpyruvate phosphomutase ICL PF00463.21 gi|15922122|ref|NP_377791.1| - 1.1e-14 53.8 0.6 1.4e-14 53.5 0.6 1.1 1 0 0 1 1 1 1 Isocitrate lyase family ComA PF02679.15 gi|15922122|ref|NP_377791.1| - 0.011 15.2 0.5 0.011 15.2 0.5 1.7 2 0 0 2 2 2 0 (2R)-phospho-3-sulfolactate synthase (ComA) NMO PF03060.15 gi|15922122|ref|NP_377791.1| - 0.037 13.4 0.3 0.053 12.9 0.3 1.3 1 0 0 1 1 1 0 Nitronate monooxygenase IMPDH PF00478.25 gi|15922122|ref|NP_377791.1| - 0.14 11.1 2.7 0.19 10.7 0.2 1.9 2 0 0 2 2 2 0 IMP dehydrogenase / GMP reductase domain MmgE_PrpD PF03972.14 gi|15922123|ref|NP_377792.1| - 3.9e-100 335.5 0.0 5.3e-100 335.0 0.0 1.0 1 0 0 1 1 1 1 MmgE/PrpD family Ldh_1_N PF00056.23 gi|15922124|ref|NP_377793.1| - 5e-32 110.9 0.1 1.1e-31 109.8 0.1 1.5 1 0 0 1 1 1 1 lactate/malate dehydrogenase, NAD binding domain F420_oxidored PF03807.17 gi|15922124|ref|NP_377793.1| - 5.7e-05 23.6 0.1 0.00021 21.8 0.0 2.2 2 1 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent Ldh_1_C PF02866.18 gi|15922124|ref|NP_377793.1| - 6.3e-05 23.0 0.0 9.9e-05 22.3 0.0 1.3 1 0 0 1 1 1 1 lactate/malate dehydrogenase, alpha/beta C-terminal domain NAD_binding_2 PF03446.15 gi|15922124|ref|NP_377793.1| - 0.0021 18.2 0.0 0.0054 16.9 0.0 1.8 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_Gly3P_dh_N PF01210.23 gi|15922124|ref|NP_377793.1| - 0.017 15.1 0.0 0.11 12.5 0.0 2.2 2 0 0 2 2 2 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus OCD_Mu_crystall PF02423.15 gi|15922124|ref|NP_377793.1| - 0.018 14.0 0.0 0.027 13.4 0.0 1.2 1 0 0 1 1 1 0 Ornithine cyclodeaminase/mu-crystallin family 3HCDH_N PF02737.18 gi|15922124|ref|NP_377793.1| - 0.033 14.1 0.0 0.065 13.1 0.0 1.5 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BacA PF02673.18 gi|15922126|ref|NP_377795.1| - 1.7e-46 159.0 16.5 2e-46 158.8 16.5 1.1 1 0 0 1 1 1 1 Bacitracin resistance protein BacA DUF3188 PF11384.8 gi|15922126|ref|NP_377795.1| - 0.046 13.4 0.3 0.046 13.4 0.3 4.0 4 1 2 6 6 6 0 Protein of unknown function (DUF3188) ATPase_2 PF01637.18 gi|15922127|ref|NP_377796.1| - 6.6e-11 42.6 0.4 0.00018 21.5 0.0 2.4 2 0 0 2 2 2 2 ATPase domain predominantly from Archaea AAA_14 PF13173.6 gi|15922127|ref|NP_377796.1| - 7.3e-11 42.2 0.4 1.4e-05 25.1 0.2 2.6 2 0 0 2 2 2 2 AAA domain AAA_16 PF13191.6 gi|15922127|ref|NP_377796.1| - 2.3e-07 31.4 0.0 2.5e-06 28.0 0.0 2.1 2 0 0 2 2 2 1 AAA ATPase domain PRRSV_2b PF07069.11 gi|15922127|ref|NP_377796.1| - 0.011 16.3 0.0 0.022 15.2 0.0 1.5 1 0 0 1 1 1 0 Porcine reproductive and respiratory syndrome virus 2b AAA_35 PF14516.6 gi|15922127|ref|NP_377796.1| - 0.011 14.6 0.1 0.13 11.1 0.0 2.2 2 0 0 2 2 2 0 AAA-like domain TniB PF05621.11 gi|15922127|ref|NP_377796.1| - 0.088 12.2 0.0 1.7 8.0 0.0 2.2 2 0 0 2 2 2 0 Bacterial TniB protein AAA_29 PF13555.6 gi|15922127|ref|NP_377796.1| - 0.14 11.9 0.0 0.37 10.6 0.0 1.7 1 0 0 1 1 1 0 P-loop containing region of AAA domain DUF4116 PF13475.6 gi|15922127|ref|NP_377796.1| - 2.3 8.0 5.3 2.4 8.0 1.2 2.5 2 0 0 2 2 2 0 Domain of unknown function (DUF4116) zf-C3H2C3 PF17122.5 gi|15922127|ref|NP_377796.1| - 5.1 7.2 5.8 5.9 7.0 1.0 2.2 2 0 0 2 2 2 0 Zinc-finger DUF302 PF03625.14 gi|15922128|ref|NP_377797.1| - 6.3e-19 67.6 0.0 9.3e-19 67.1 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function DUF302 NAC PF01849.18 gi|15922128|ref|NP_377797.1| - 0.035 14.1 0.4 0.076 13.0 0.4 1.6 1 0 0 1 1 1 0 NAC domain TLE_N PF03920.15 gi|15922128|ref|NP_377797.1| - 0.16 12.1 1.0 0.21 11.7 0.2 1.5 2 0 0 2 2 2 0 Groucho/TLE N-terminal Q-rich domain TP_methylase PF00590.20 gi|15922129|ref|NP_377798.1| - 3.8e-28 98.9 1.3 3.9e-28 98.8 0.2 1.5 2 0 0 2 2 2 1 Tetrapyrrole (Corrin/Porphyrin) Methylases RhoGAP PF00620.27 gi|15922129|ref|NP_377798.1| - 0.066 13.0 0.3 0.11 12.3 0.3 1.5 1 0 0 1 1 1 0 RhoGAP domain Imm41 PF15592.6 gi|15922129|ref|NP_377798.1| - 0.076 13.3 0.5 0.17 12.2 0.3 1.7 1 1 0 1 1 1 0 Immunity protein 41 Exog_C PF18026.1 gi|15922129|ref|NP_377798.1| - 0.098 12.7 2.4 0.38 10.8 0.0 2.7 3 0 0 3 3 3 0 Endo/exonuclease (EXOG) C-terminal domain DUF1542 PF07564.11 gi|15922129|ref|NP_377798.1| - 0.69 10.1 6.9 0.11 12.6 2.8 1.9 2 0 0 2 2 2 0 Domain of Unknown Function (DUF1542) TP_methylase PF00590.20 gi|15922130|ref|NP_377799.1| - 1.1e-34 120.2 0.0 1.3e-34 120.0 0.0 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases PCMT PF01135.19 gi|15922132|ref|NP_377801.1| - 7.3e-12 45.5 0.2 1.2e-11 44.8 0.2 1.3 1 1 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.6 gi|15922132|ref|NP_377801.1| - 7.6e-11 42.0 0.1 9.4e-11 41.7 0.1 1.1 1 0 0 1 1 1 1 Methyltransferase domain Cons_hypoth95 PF03602.15 gi|15922132|ref|NP_377801.1| - 6.8e-08 32.4 0.1 9.2e-08 31.9 0.1 1.3 1 1 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_3 PF01596.17 gi|15922132|ref|NP_377801.1| - 5.8e-07 28.9 0.5 7.6e-07 28.5 0.5 1.2 1 0 0 1 1 1 1 O-methyltransferase GidB PF02527.15 gi|15922132|ref|NP_377801.1| - 1.4e-06 27.8 0.2 1.9e-06 27.3 0.2 1.2 1 0 0 1 1 1 1 rRNA small subunit methyltransferase G Methyltransf_25 PF13649.6 gi|15922132|ref|NP_377801.1| - 2.8e-06 27.9 0.0 4.1e-06 27.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|15922132|ref|NP_377801.1| - 3.9e-06 26.4 0.5 4.9e-06 26.1 0.5 1.1 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family MTS PF05175.14 gi|15922132|ref|NP_377801.1| - 6.2e-06 25.9 0.3 2.3e-05 24.0 0.2 1.9 1 1 1 2 2 2 1 Methyltransferase small domain Methyltransf_4 PF02390.17 gi|15922132|ref|NP_377801.1| - 7e-06 25.6 0.3 5.8e-05 22.6 0.0 2.2 3 0 0 3 3 3 1 Putative methyltransferase GCD14 PF08704.10 gi|15922132|ref|NP_377801.1| - 2.3e-05 24.2 0.0 3e-05 23.8 0.0 1.1 1 0 0 1 1 1 1 tRNA methyltransferase complex GCD14 subunit DOT1 PF08123.13 gi|15922132|ref|NP_377801.1| - 2.7e-05 23.8 0.2 6.9e-05 22.5 0.1 1.6 1 1 1 2 2 2 1 Histone methylation protein DOT1 CMAS PF02353.20 gi|15922132|ref|NP_377801.1| - 3.4e-05 23.3 0.2 4.1e-05 23.0 0.2 1.1 1 0 0 1 1 1 1 Mycolic acid cyclopropane synthetase PrmA PF06325.13 gi|15922132|ref|NP_377801.1| - 5.9e-05 22.6 2.0 7.6e-05 22.2 2.0 1.1 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_18 PF12847.7 gi|15922132|ref|NP_377801.1| - 7.3e-05 22.7 0.7 0.00023 21.1 0.5 1.7 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|15922132|ref|NP_377801.1| - 0.00013 22.6 0.0 0.00022 21.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Met_10 PF02475.16 gi|15922132|ref|NP_377801.1| - 0.00034 20.4 0.1 0.00043 20.1 0.1 1.3 1 1 0 1 1 1 1 Met-10+ like-protein Methyltransf_24 PF13578.6 gi|15922132|ref|NP_377801.1| - 0.00034 21.6 0.0 0.00048 21.1 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Fibrillarin PF01269.17 gi|15922132|ref|NP_377801.1| - 0.00063 18.9 0.0 0.00078 18.6 0.0 1.2 1 0 0 1 1 1 1 Fibrillarin Methyltransf_15 PF09445.10 gi|15922132|ref|NP_377801.1| - 0.0012 18.4 0.0 0.0018 17.9 0.0 1.2 1 0 0 1 1 1 1 RNA cap guanine-N2 methyltransferase RrnaAD PF00398.20 gi|15922132|ref|NP_377801.1| - 0.0036 16.4 0.1 0.0067 15.5 0.1 1.3 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltr_RsmB-F PF01189.17 gi|15922132|ref|NP_377801.1| - 0.0042 16.7 0.1 0.018 14.7 0.0 1.9 1 1 1 2 2 2 1 16S rRNA methyltransferase RsmB/F Methyltransf_16 PF10294.9 gi|15922132|ref|NP_377801.1| - 0.0055 16.4 0.1 0.0082 15.9 0.1 1.3 1 0 0 1 1 1 1 Lysine methyltransferase Methyltransf_12 PF08242.12 gi|15922132|ref|NP_377801.1| - 0.008 16.9 0.1 0.013 16.2 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain TssC PF17541.2 gi|15922132|ref|NP_377801.1| - 0.036 12.9 0.2 4.4 6.0 0.0 2.2 2 1 0 2 2 2 0 Type VI secretion system, TssC, VipB UPF0020 PF01170.18 gi|15922132|ref|NP_377801.1| - 0.039 13.7 0.5 0.59 9.8 0.5 2.2 1 1 0 1 1 1 0 Putative RNA methylase family UPF0020 DNA_methylase PF00145.17 gi|15922132|ref|NP_377801.1| - 0.078 12.3 0.2 0.93 8.8 0.1 2.0 2 0 0 2 2 2 0 C-5 cytosine-specific DNA methylase CbiD PF01888.17 gi|15922134|ref|NP_377803.1| - 1.4e-77 260.4 5.0 1.9e-77 260.0 1.6 2.0 2 0 0 2 2 2 2 CbiD TP_methylase PF00590.20 gi|15922135|ref|NP_377804.1| - 4.2e-41 141.2 0.5 4.8e-41 141.0 0.5 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases RPT PF13446.6 gi|15922135|ref|NP_377804.1| - 0.054 13.4 0.3 0.24 11.4 0.0 2.2 2 0 0 2 2 2 0 A repeated domain in UCH-protein CbiC PF02570.15 gi|15922136|ref|NP_377805.1| - 1.9e-49 168.0 0.5 2.6e-49 167.6 0.5 1.2 1 0 0 1 1 1 1 Precorrin-8X methylmutase CbiX PF01903.17 gi|15922136|ref|NP_377805.1| - 2.7e-22 79.1 0.0 6.1e-22 78.0 0.0 1.6 1 0 0 1 1 1 1 CbiX CbiK PF06180.11 gi|15922136|ref|NP_377805.1| - 0.043 13.1 0.1 0.11 11.8 0.0 1.7 2 0 0 2 2 2 0 Cobalt chelatase (CbiK) Pyr_redox_2 PF07992.14 gi|15922136|ref|NP_377805.1| - 0.11 11.7 0.0 0.17 11.1 0.0 1.3 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase TP_methylase PF00590.20 gi|15922137|ref|NP_377806.1| - 2.3e-27 96.3 0.0 2.7e-27 96.1 0.0 1.0 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases CbiG_N PF11760.8 gi|161751091|ref|NP_377807.2| - 1.6e-28 98.5 0.4 3.8e-28 97.3 0.1 1.8 2 0 0 2 2 2 1 Cobalamin synthesis G N-terminal CbiG_C PF01890.16 gi|161751091|ref|NP_377807.2| - 2e-16 60.6 1.6 3.1e-16 60.0 0.2 1.9 2 0 0 2 2 2 1 Cobalamin synthesis G C-terminus Asparaginase_2 PF01112.18 gi|15922139|ref|NP_377808.1| - 9.6e-69 231.7 9.9 3.7e-39 134.5 2.7 2.0 1 1 1 2 2 2 2 Asparaginase MFS_1 PF07690.16 gi|15922140|ref|NP_377809.1| - 8.4e-18 64.4 42.6 8.4e-18 64.4 42.6 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|15922140|ref|NP_377809.1| - 7.1e-16 58.1 32.3 3.2e-13 49.4 9.4 2.3 1 1 0 2 2 2 2 Sugar (and other) transporter Phage_holin_3_2 PF04550.12 gi|15922140|ref|NP_377809.1| - 2.5 8.7 6.8 2.8 8.6 0.6 3.5 3 0 0 3 3 3 0 Phage holin family 2 EMP70 PF02990.16 gi|15922141|ref|NP_377810.1| - 0.0038 16.0 10.8 0.0038 16.0 10.8 1.4 2 0 0 2 2 2 1 Endomembrane protein 70 MacB_PCD PF12704.7 gi|15922141|ref|NP_377810.1| - 0.033 14.5 1.5 0.036 14.4 0.1 1.8 2 0 0 2 2 2 0 MacB-like periplasmic core domain DUF2070 PF09843.9 gi|15922141|ref|NP_377810.1| - 0.44 8.8 15.0 0.65 8.2 15.0 1.3 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) ATPase PF06745.13 gi|15922142|ref|NP_377811.1| - 4e-89 297.9 0.0 5.5e-89 297.5 0.0 1.2 1 0 0 1 1 1 1 KaiC GvpD PF07088.11 gi|15922142|ref|NP_377811.1| - 0.00067 18.4 0.0 0.001 17.8 0.0 1.2 1 0 0 1 1 1 1 GvpD gas vesicle protein DUF2075 PF09848.9 gi|15922142|ref|NP_377811.1| - 0.001 18.4 0.5 0.0014 17.9 0.0 1.6 2 0 0 2 2 2 1 Uncharacterized conserved protein (DUF2075) AAA_25 PF13481.6 gi|15922142|ref|NP_377811.1| - 0.0012 18.5 0.0 0.0073 15.9 0.0 2.1 1 1 0 1 1 1 1 AAA domain AAA_14 PF13173.6 gi|15922142|ref|NP_377811.1| - 0.0076 16.3 0.0 0.015 15.4 0.0 1.5 1 0 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|15922142|ref|NP_377811.1| - 0.0092 15.7 0.4 0.038 13.7 0.0 2.2 3 1 0 3 3 3 1 AAA domain Rad51 PF08423.11 gi|15922142|ref|NP_377811.1| - 0.011 15.0 0.2 0.032 13.5 0.0 1.8 2 1 1 3 3 3 0 Rad51 T2SSE PF00437.20 gi|15922142|ref|NP_377811.1| - 0.028 13.5 0.0 0.058 12.5 0.0 1.5 1 0 0 1 1 1 0 Type II/IV secretion system protein N6_N4_Mtase PF01555.18 gi|15922142|ref|NP_377811.1| - 0.038 13.7 0.0 0.089 12.5 0.0 1.5 1 1 1 2 2 2 0 DNA methylase DnaB_C PF03796.15 gi|15922142|ref|NP_377811.1| - 0.05 12.9 0.0 0.14 11.5 0.0 1.7 2 0 0 2 2 2 0 DnaB-like helicase C terminal domain AAA_16 PF13191.6 gi|15922142|ref|NP_377811.1| - 0.057 13.8 0.0 0.099 13.0 0.0 1.4 1 1 0 1 1 1 0 AAA ATPase domain AAA_22 PF13401.6 gi|15922142|ref|NP_377811.1| - 0.12 12.6 0.0 0.2 11.9 0.0 1.5 1 1 0 1 1 1 0 AAA domain AA_permease PF00324.21 gi|15922144|ref|NP_377813.1| - 1.2e-20 73.6 45.5 1.2e-20 73.6 45.5 1.6 1 1 1 2 2 2 1 Amino acid permease AA_permease_2 PF13520.6 gi|15922144|ref|NP_377813.1| - 1.4e-11 43.9 46.2 2.1e-11 43.3 46.2 1.3 1 0 0 1 1 1 1 Amino acid permease T_cell_tran_alt PF15128.6 gi|15922145|ref|NP_377814.1| - 0.09 12.6 0.1 0.18 11.6 0.1 1.5 1 0 0 1 1 1 0 T-cell leukemia translocation-altered ThrE PF06738.12 gi|15922145|ref|NP_377814.1| - 0.86 8.9 5.6 1.3 8.3 5.6 1.2 1 0 0 1 1 1 0 Putative threonine/serine exporter DrsE PF02635.15 gi|15922146|ref|NP_377815.1| - 1.4e-12 48.0 0.4 1.7e-12 47.7 0.4 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family DrsE_2 PF13686.6 gi|15922146|ref|NP_377815.1| - 0.00027 20.9 0.5 0.00035 20.5 0.5 1.1 1 0 0 1 1 1 1 DsrE/DsrF/DrsH-like family FtsK_SpoIIIE PF01580.18 gi|15922146|ref|NP_377815.1| - 0.084 12.2 0.0 0.092 12.1 0.0 1.1 1 0 0 1 1 1 0 FtsK/SpoIIIE family DUF2299 PF10061.9 gi|15922147|ref|NP_377816.1| - 1.1e-38 132.0 0.5 1.3e-38 131.9 0.5 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2299) HAD_2 PF13419.6 gi|15922148|ref|NP_377817.1| - 9.5e-11 42.1 0.1 1.4e-10 41.5 0.1 1.3 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|15922148|ref|NP_377817.1| - 0.0027 17.7 0.0 0.005 16.9 0.0 1.4 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase PF00702.26 gi|15922148|ref|NP_377817.1| - 0.19 12.0 0.0 0.24 11.7 0.0 1.2 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase Fer4_7 PF12838.7 gi|15922149|ref|NP_377818.1| - 1e-08 35.6 17.2 0.00086 19.9 4.1 3.6 3 1 0 3 3 3 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|15922149|ref|NP_377818.1| - 1.7e-06 27.6 30.4 1.3e-05 24.8 3.7 4.9 6 0 0 6 6 6 3 4Fe-4S binding domain Fer4_9 PF13187.6 gi|15922149|ref|NP_377818.1| - 2.7e-06 27.4 7.6 2.7e-06 27.4 7.6 3.6 2 1 1 3 3 3 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15922149|ref|NP_377818.1| - 5.8e-06 26.3 27.4 0.0015 18.6 2.7 3.7 3 1 1 4 4 4 3 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15922149|ref|NP_377818.1| - 6.8e-06 25.9 10.5 9.4e-05 22.3 3.5 3.9 4 0 0 4 4 4 2 4Fe-4S binding domain Fer4_21 PF14697.6 gi|15922149|ref|NP_377818.1| - 1.3e-05 25.2 8.2 1.3e-05 25.2 8.2 2.6 4 0 0 4 4 2 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15922149|ref|NP_377818.1| - 6.6e-05 22.8 24.5 0.00087 19.2 2.1 5.0 5 0 0 5 5 5 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|15922149|ref|NP_377818.1| - 0.0017 18.8 15.4 0.22 12.1 0.1 4.4 3 1 1 4 4 4 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|15922149|ref|NP_377818.1| - 0.013 16.3 6.7 0.66 10.9 0.1 3.4 3 0 0 3 3 3 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15922149|ref|NP_377818.1| - 0.03 14.8 3.1 0.03 14.8 3.1 4.7 5 0 0 5 5 5 0 4Fe-4S binding domain Fer4_8 PF13183.6 gi|15922149|ref|NP_377818.1| - 0.063 13.7 17.3 0.69 10.4 0.8 3.6 3 1 0 3 3 3 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15922149|ref|NP_377818.1| - 0.13 13.2 20.3 0.084 13.8 5.0 3.9 3 2 2 5 5 4 0 4Fe-4S double cluster binding domain Fer4_19 PF06902.11 gi|15922149|ref|NP_377818.1| - 0.71 10.0 6.0 1.9 8.6 0.5 3.3 3 0 0 3 3 3 0 Divergent 4Fe-4S mono-cluster Fer4_15 PF13459.6 gi|15922149|ref|NP_377818.1| - 2.4 8.9 13.8 3.1 8.6 7.3 3.2 2 1 0 2 2 2 0 4Fe-4S single cluster domain Nitrate_red_del PF02613.15 gi|15922150|ref|NP_377819.1| - 5.7e-16 58.8 0.0 7.6e-16 58.4 0.0 1.2 1 0 0 1 1 1 1 Nitrate reductase delta subunit Tk-SP_N-pro PF18237.1 gi|15922150|ref|NP_377819.1| - 0.033 14.2 0.3 0.078 13.0 0.3 1.6 1 0 0 1 1 1 0 Tk-SP N-propeptide domain Fer4_11 PF13247.6 gi|15922151|ref|NP_377820.1| - 1.1e-19 70.4 7.3 1.1e-19 70.4 7.3 2.1 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15922151|ref|NP_377820.1| - 7.4e-12 45.7 14.0 2.2e-05 25.0 5.9 3.2 2 2 1 3 3 3 3 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15922151|ref|NP_377820.1| - 7.6e-08 32.4 11.8 0.0011 19.1 5.1 3.1 2 2 0 2 2 2 2 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15922151|ref|NP_377820.1| - 9.8e-08 32.0 15.4 5.2e-05 23.3 5.9 3.3 3 0 0 3 3 3 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|15922151|ref|NP_377820.1| - 2.4e-05 24.7 10.0 8.8e-05 22.9 0.4 3.1 2 2 1 3 3 3 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15922151|ref|NP_377820.1| - 0.0044 17.4 30.8 0.16 12.6 1.3 4.7 5 0 0 5 5 5 3 4Fe-4S binding domain Fer4_17 PF13534.6 gi|15922151|ref|NP_377820.1| - 0.026 15.0 18.2 0.54 10.8 0.4 3.8 2 1 0 3 3 3 0 4Fe-4S dicluster domain Fer4 PF00037.27 gi|15922151|ref|NP_377820.1| - 0.042 13.7 0.8 0.042 13.7 0.8 4.4 4 0 0 4 4 4 0 4Fe-4S binding domain Fer4_2 PF12797.7 gi|15922151|ref|NP_377820.1| - 0.13 12.4 25.3 1.5 9.1 0.2 4.7 5 0 0 5 5 5 0 4Fe-4S binding domain Fer4_21 PF14697.6 gi|15922151|ref|NP_377820.1| - 0.69 10.1 23.3 0.5 10.5 0.8 3.7 2 1 2 4 4 4 0 4Fe-4S dicluster domain Fer4_3 PF12798.7 gi|15922151|ref|NP_377820.1| - 1.7 9.8 34.7 0.12 13.4 7.9 4.4 4 0 0 4 4 4 0 4Fe-4S binding domain Molybdopterin PF00384.22 gi|15922152|ref|NP_377821.1| - 2.2e-05 23.6 0.0 1.1 8.2 0.0 3.2 3 0 0 3 3 3 3 Molybdopterin oxidoreductase TAT_signal PF10518.9 gi|15922152|ref|NP_377821.1| - 0.016 15.0 0.1 0.038 13.8 0.1 1.7 1 0 0 1 1 1 0 TAT (twin-arginine translocation) pathway signal sequence TPR_2 PF07719.17 gi|15922153|ref|NP_377822.1| - 2.3e-25 86.6 26.4 0.00019 21.3 0.1 9.1 8 1 1 9 9 9 5 Tetratricopeptide repeat TPR_1 PF00515.28 gi|15922153|ref|NP_377822.1| - 2.4e-19 68.2 32.6 0.00018 21.2 0.2 9.2 9 0 0 9 9 9 6 Tetratricopeptide repeat TPR_16 PF13432.6 gi|15922153|ref|NP_377822.1| - 3.5e-19 69.2 0.2 0.00015 22.4 0.1 5.7 4 2 1 5 5 5 4 Tetratricopeptide repeat TPR_8 PF13181.6 gi|15922153|ref|NP_377822.1| - 7.5e-19 66.3 36.8 0.00037 20.5 0.3 8.8 9 0 0 9 9 9 5 Tetratricopeptide repeat TPR_14 PF13428.6 gi|15922153|ref|NP_377822.1| - 2.6e-17 62.0 1.4 0.0095 16.7 0.0 7.3 5 3 3 8 8 8 2 Tetratricopeptide repeat TPR_19 PF14559.6 gi|15922153|ref|NP_377822.1| - 1.7e-16 60.5 8.3 3.7e-05 24.2 0.0 6.0 2 1 3 6 6 6 4 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|15922153|ref|NP_377822.1| - 2e-15 56.8 19.4 3.5e-06 27.1 0.1 5.7 2 2 5 7 7 7 5 Anaphase-promoting complex, cyclosome, subunit 3 NARP1 PF12569.8 gi|15922153|ref|NP_377822.1| - 3.1e-15 56.1 13.4 1.1e-05 24.6 0.6 4.5 1 1 4 5 5 5 4 NMDA receptor-regulated protein 1 TPR_11 PF13414.6 gi|15922153|ref|NP_377822.1| - 6e-14 51.5 19.9 0.00012 21.7 0.1 8.0 7 1 1 8 8 8 4 TPR repeat TPR_12 PF13424.6 gi|15922153|ref|NP_377822.1| - 4.7e-13 49.2 9.3 0.022 15.0 0.9 6.9 6 1 1 7 7 7 2 Tetratricopeptide repeat TPR_9 PF13371.6 gi|15922153|ref|NP_377822.1| - 2.6e-09 37.1 0.0 0.0011 19.1 0.0 3.8 2 2 1 3 3 3 2 Tetratricopeptide repeat TPR_17 PF13431.6 gi|15922153|ref|NP_377822.1| - 6.5e-09 35.6 16.5 0.09 13.2 0.0 7.5 9 0 0 9 9 8 3 Tetratricopeptide repeat TPR_6 PF13174.6 gi|15922153|ref|NP_377822.1| - 1.4e-08 34.8 16.2 2.2 9.1 0.1 8.5 9 0 0 9 9 9 1 Tetratricopeptide repeat TPR_7 PF13176.6 gi|15922153|ref|NP_377822.1| - 4.8e-06 26.2 4.3 0.13 12.3 0.1 6.7 8 0 0 8 8 7 1 Tetratricopeptide repeat TPR_MalT PF17874.1 gi|15922153|ref|NP_377822.1| - 9.8e-06 25.2 0.0 0.039 13.3 0.0 3.5 2 1 0 3 3 3 2 MalT-like TPR region SRP_TPR_like PF17004.5 gi|15922153|ref|NP_377822.1| - 1.3e-05 25.2 19.7 9.9e-05 22.3 0.7 3.7 1 1 3 4 4 4 3 Putative TPR-like repeat TPR_4 PF07721.14 gi|15922153|ref|NP_377822.1| - 6.2e-05 23.2 0.0 3.7 8.4 0.0 4.2 4 0 0 4 4 4 1 Tetratricopeptide repeat ChAPs PF09295.10 gi|15922153|ref|NP_377822.1| - 0.00016 20.8 0.2 0.023 13.7 0.1 2.1 1 1 1 2 2 2 2 ChAPs (Chs5p-Arf1p-binding proteins) HrpB1_HrpK PF09613.10 gi|15922153|ref|NP_377822.1| - 0.00037 20.1 0.0 0.099 12.3 0.0 2.6 2 0 0 2 2 2 1 Bacterial type III secretion protein (HrpB1_HrpK) Coatomer_E PF04733.14 gi|15922153|ref|NP_377822.1| - 0.00064 19.2 0.2 0.08 12.3 0.0 3.1 1 1 2 3 3 3 1 Coatomer epsilon subunit DUF627 PF04781.12 gi|15922153|ref|NP_377822.1| - 0.0018 18.3 1.3 8.1 6.5 0.0 4.4 2 1 1 3 3 3 0 Protein of unknown function (DUF627) TPR_20 PF14561.6 gi|15922153|ref|NP_377822.1| - 0.0019 18.5 1.5 4.7 7.6 0.0 4.9 3 2 3 7 7 7 1 Tetratricopeptide repeat TPR_10 PF13374.6 gi|15922153|ref|NP_377822.1| - 0.0043 16.9 6.1 3.2 7.7 0.1 6.1 7 0 0 7 7 7 1 Tetratricopeptide repeat Alkyl_sulf_dimr PF14863.6 gi|15922153|ref|NP_377822.1| - 0.016 15.7 0.2 0.067 13.6 0.0 2.1 2 0 0 2 2 2 0 Alkyl sulfatase dimerisation ATP13 PF12921.7 gi|15922153|ref|NP_377822.1| - 0.031 14.1 0.7 0.79 9.6 0.1 2.3 1 1 1 2 2 2 0 Mitochondrial ATPase expression CD225 PF04505.12 gi|15922153|ref|NP_377822.1| - 0.041 14.0 0.1 0.1 12.7 0.1 1.7 1 0 0 1 1 1 0 Interferon-induced transmembrane protein Wzy_C_2 PF11846.8 gi|15922153|ref|NP_377822.1| - 0.044 13.7 0.0 0.3 11.0 0.0 2.2 2 1 1 3 3 3 0 Virulence factor membrane-bound polymerase, C-terminal Fis1_TPR_C PF14853.6 gi|15922153|ref|NP_377822.1| - 0.057 13.5 17.8 4 7.6 0.0 5.9 7 1 0 7 7 7 0 Fis1 C-terminal tetratricopeptide repeat SHNi-TPR PF10516.9 gi|15922153|ref|NP_377822.1| - 0.067 12.7 0.7 12 5.4 0.0 4.1 5 0 0 5 5 4 0 SHNi-TPR NrfD PF03916.14 gi|15922154|ref|NP_377823.1| - 1.8e-10 41.0 21.9 1.8e-10 41.0 21.9 2.0 2 0 0 2 2 2 2 Polysulphide reductase, NrfD DUF4231 PF14015.6 gi|15922154|ref|NP_377823.1| - 1.6 9.2 4.3 10 6.7 0.2 3.1 3 0 0 3 3 3 0 Protein of unknown function (DUF4231) HTH_24 PF13412.6 gi|15922155|ref|NP_377824.1| - 1.1e-05 24.9 0.0 3.1e-05 23.4 0.0 1.8 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding TrmB PF01978.19 gi|15922155|ref|NP_377824.1| - 3.6e-05 23.5 0.0 8.3e-05 22.4 0.0 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|15922155|ref|NP_377824.1| - 5.4e-05 23.0 0.1 0.00013 21.8 0.0 1.7 2 0 0 2 2 2 1 MarR family HTH_5 PF01022.20 gi|15922155|ref|NP_377824.1| - 0.00027 20.7 1.4 0.00053 19.8 0.0 2.2 3 0 0 3 3 3 1 Bacterial regulatory protein, arsR family HTH_27 PF13463.6 gi|15922155|ref|NP_377824.1| - 0.0008 19.9 0.0 0.0019 18.7 0.0 1.7 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_45 PF14947.6 gi|15922155|ref|NP_377824.1| - 0.0009 19.2 0.1 0.002 18.1 0.1 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix Topoisom_bac PF01131.20 gi|15922155|ref|NP_377824.1| - 0.0012 18.0 0.1 0.0022 17.1 0.0 1.5 2 0 0 2 2 2 1 DNA topoisomerase HTH_IclR PF09339.10 gi|15922155|ref|NP_377824.1| - 0.0012 18.6 0.0 0.0026 17.5 0.0 1.5 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|15922155|ref|NP_377824.1| - 0.0023 17.8 0.2 0.0074 16.2 0.0 1.9 3 0 0 3 3 2 1 Crp-like helix-turn-helix domain Fe_dep_repress PF01325.19 gi|15922155|ref|NP_377824.1| - 0.0042 17.2 0.0 0.014 15.6 0.0 1.8 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_11 PF08279.12 gi|15922155|ref|NP_377824.1| - 0.013 15.4 0.0 0.044 13.7 0.0 2.0 1 0 0 1 1 1 0 HTH domain GatB_Yqey PF02637.18 gi|15922155|ref|NP_377824.1| - 0.014 15.3 0.2 0.13 12.1 0.1 2.2 1 1 1 2 2 2 0 GatB domain MarR_2 PF12802.7 gi|15922155|ref|NP_377824.1| - 0.02 14.8 0.0 0.04 13.8 0.0 1.5 1 0 0 1 1 1 0 MarR family DUF3298 PF11738.8 gi|15922155|ref|NP_377824.1| - 0.055 14.5 0.0 0.22 12.6 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3298) RP-C PF03428.13 gi|15922155|ref|NP_377824.1| - 0.22 11.2 0.0 0.37 10.4 0.0 1.3 1 0 0 1 1 1 0 Replication protein C N-terminal domain DUF2173 PF09941.9 gi|15922156|ref|NP_377825.1| - 2.5e-40 137.0 0.5 2.8e-40 136.9 0.5 1.0 1 0 0 1 1 1 1 Uncharacterized conserved protein (DUF2173) SGL PF08450.12 gi|15922158|ref|NP_377827.1| - 2.9e-76 256.3 0.1 3.4e-76 256.1 0.1 1.0 1 0 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region Arylesterase PF01731.20 gi|15922158|ref|NP_377827.1| - 0.0046 17.1 0.1 0.21 11.8 0.0 2.8 3 0 0 3 3 3 1 Arylesterase Reg_prop PF07494.11 gi|15922158|ref|NP_377827.1| - 0.011 15.9 0.1 21 5.8 0.0 3.8 3 0 0 3 3 3 0 Two component regulator propeller Str_synth PF03088.16 gi|15922158|ref|NP_377827.1| - 0.12 12.5 0.0 0.31 11.2 0.0 1.7 1 0 0 1 1 1 0 Strictosidine synthase LDcluster4 PF18306.1 gi|15922159|ref|NP_377828.1| - 1.9e-17 63.3 0.0 2.2e-17 63.1 0.0 1.0 1 0 0 1 1 1 1 SLOG cluster4 family Lysine_decarbox PF03641.14 gi|15922159|ref|NP_377828.1| - 0.00085 19.4 0.0 0.0015 18.7 0.0 1.4 1 0 0 1 1 1 1 Possible lysine decarboxylase Nuc_deoxyrib_tr PF05014.15 gi|15922159|ref|NP_377828.1| - 0.063 13.3 0.0 0.1 12.6 0.0 1.5 1 1 0 1 1 1 0 Nucleoside 2-deoxyribosyltransferase GATase_4 PF13230.6 gi|15922160|ref|NP_377829.1| - 1.5e-06 27.4 0.0 1.7e-06 27.1 0.0 1.1 1 0 0 1 1 1 1 Glutamine amidotransferases class-II GATase_6 PF13522.6 gi|15922160|ref|NP_377829.1| - 1.2e-05 25.5 0.0 1.8e-05 25.0 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase domain PHD_like PF12910.7 gi|15922160|ref|NP_377829.1| - 0.029 14.4 0.4 0.061 13.4 0.4 1.5 1 0 0 1 1 1 0 Antitoxin of toxin-antitoxin, RelE / RelB, TA system ParE_toxin PF05016.15 gi|15922162|ref|NP_377831.1| - 0.00038 21.0 0.0 0.00044 20.8 0.0 1.2 1 0 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE DUF5085 PF16895.5 gi|15922162|ref|NP_377831.1| - 0.05 13.9 0.1 0.062 13.6 0.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5085) DUF1286 PF06939.11 gi|15922163|ref|NP_377832.1| - 7.9e-45 151.7 6.9 7.9e-45 151.7 6.9 1.6 2 0 0 2 2 2 1 Protein of unknown function (DUF1286) YdjM PF04307.14 gi|15922163|ref|NP_377832.1| - 3.5e-05 23.2 3.6 5.3e-05 22.6 3.6 1.3 1 0 0 1 1 1 1 LexA-binding, inner membrane-associated putative hydrolase DUF4184 PF13803.6 gi|15922163|ref|NP_377832.1| - 1.1 8.9 5.8 0.83 9.3 0.1 2.4 2 1 1 3 3 3 0 Domain of unknown function (DUF4184) DUF3834 PF12916.7 gi|15922164|ref|NP_377833.1| - 2.5e-84 281.5 2.6 2.8e-84 281.4 2.6 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3834) SBP_bac_3 PF00497.20 gi|15922164|ref|NP_377833.1| - 0.022 14.2 0.2 0.04 13.3 0.2 1.6 1 1 0 1 1 1 0 Bacterial extracellular solute-binding proteins, family 3 Clp_N PF02861.20 gi|15922164|ref|NP_377833.1| - 0.16 12.1 0.1 0.45 10.7 0.0 1.8 2 0 0 2 2 2 0 Clp amino terminal domain, pathogenicity island component MFS_1 PF07690.16 gi|15922165|ref|NP_377834.1| - 5.7e-38 130.7 40.4 7.3e-23 81.0 15.4 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1 PF07690.16 gi|15922166|ref|NP_377835.1| - 3.9e-31 108.3 46.4 5.1e-19 68.4 17.2 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily DoxD PF04173.13 gi|15922168|ref|NP_377837.1| - 1.1e-69 233.6 1.5 1.3e-69 233.4 1.5 1.0 1 0 0 1 1 1 1 TQO small subunit DoxD DoxX PF07681.12 gi|15922168|ref|NP_377837.1| - 1.7e-07 31.7 8.3 1.7e-07 31.7 8.3 1.9 2 1 0 2 2 2 1 DoxX DoxA PF07680.11 gi|15922169|ref|NP_377838.1| - 3.5e-33 114.3 0.1 4.1e-33 114.1 0.1 1.1 1 0 0 1 1 1 1 TQO small subunit DoxA SWIM PF04434.17 gi|15922170|ref|NP_377839.1| - 0.0008 19.0 0.1 0.0016 18.1 0.1 1.5 1 0 0 1 1 1 1 SWIM zinc finger Ku_PK_bind PF08785.11 gi|15922170|ref|NP_377839.1| - 0.0014 18.7 2.8 0.0017 18.5 0.4 2.5 3 0 0 3 3 3 1 Ku C terminal domain like TPR_1 PF00515.28 gi|15922170|ref|NP_377839.1| - 0.022 14.6 1.2 0.11 12.4 0.6 2.4 2 0 0 2 2 2 0 Tetratricopeptide repeat TPR_2 PF07719.17 gi|15922170|ref|NP_377839.1| - 0.2 11.9 1.4 0.62 10.3 0.3 2.5 2 0 0 2 2 2 0 Tetratricopeptide repeat VHL_C PF17211.3 gi|15922170|ref|NP_377839.1| - 3 7.9 8.3 2.1 8.4 0.4 3.7 3 1 1 4 4 4 0 VHL box domain AA_permease_2 PF13520.6 gi|15922171|ref|NP_377840.1| - 5.3e-32 111.2 63.6 7.3e-32 110.7 63.6 1.2 1 0 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|15922171|ref|NP_377840.1| - 2e-11 43.2 52.2 2.5e-11 42.9 52.2 1.1 1 0 0 1 1 1 1 Amino acid permease Fer4_7 PF12838.7 gi|15922172|ref|NP_377841.1| - 1.8e-05 25.3 6.3 1.8e-05 25.3 6.3 2.1 3 0 0 3 3 3 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15922172|ref|NP_377841.1| - 2.7e-05 24.2 6.7 2.7e-05 24.2 6.7 1.6 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15922172|ref|NP_377841.1| - 0.00025 21.2 5.3 0.00071 19.7 5.4 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|15922172|ref|NP_377841.1| - 0.0014 18.4 1.3 0.0014 18.4 1.3 3.0 2 1 0 2 2 2 1 4Fe-4S binding domain Fer4_18 PF13746.6 gi|15922172|ref|NP_377841.1| - 0.0014 18.8 3.1 0.003 17.7 3.1 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15922172|ref|NP_377841.1| - 0.0018 18.3 8.0 0.65 10.2 3.1 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|15922172|ref|NP_377841.1| - 0.0037 17.3 12.3 0.14 12.2 1.9 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|15922172|ref|NP_377841.1| - 0.0052 17.7 3.5 2.2 9.3 0.1 2.5 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_11 PF13247.6 gi|15922172|ref|NP_377841.1| - 0.02 15.0 1.7 0.02 15.0 1.7 1.6 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|15922172|ref|NP_377841.1| - 0.074 13.6 5.0 5.1 7.7 0.1 2.5 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15922172|ref|NP_377841.1| - 0.19 12.4 10.4 1.5 9.5 2.9 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_20 PF14691.6 gi|15922172|ref|NP_377841.1| - 0.79 9.5 7.9 0.25 11.1 2.3 2.2 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4_3 PF12798.7 gi|15922172|ref|NP_377841.1| - 0.79 10.8 11.2 7 7.8 0.6 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain FixQ PF05545.11 gi|15922173|ref|NP_377842.1| - 0.0033 17.4 1.7 0.0033 17.4 1.7 4.0 5 1 1 6 6 6 1 Cbb3-type cytochrome oxidase component FixQ Phage_holin_3_6 PF07332.11 gi|15922173|ref|NP_377842.1| - 2.2 8.3 14.6 0.042 13.9 1.9 2.6 2 1 0 2 2 2 0 Putative Actinobacterial Holin-X, holin superfamily III Na_H_Exchanger PF00999.21 gi|15922174|ref|NP_377843.1| - 4.5e-32 111.3 49.8 5.8e-32 110.9 49.8 1.0 1 0 0 1 1 1 1 Sodium/hydrogen exchanger family CBS PF00571.28 gi|15922174|ref|NP_377843.1| - 1.6e-12 47.7 2.4 8.3e-07 29.4 0.0 2.6 2 0 0 2 2 2 2 CBS domain DUF3211 PF11485.8 gi|15922175|ref|NP_377844.1| - 5.2e-09 36.4 4.4 3.7e-08 33.7 2.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF3211) DUF3834 PF12916.7 gi|15922175|ref|NP_377844.1| - 0.0037 16.5 1.1 0.15 11.3 0.2 2.6 2 1 1 3 3 3 2 Protein of unknown function (DUF3834) COXG PF06240.13 gi|15922175|ref|NP_377844.1| - 0.013 15.3 0.0 0.052 13.3 0.0 2.0 1 1 0 1 1 1 0 Carbon monoxide dehydrogenase subunit G (CoxG) CCDC117 PF15810.5 gi|15922175|ref|NP_377844.1| - 0.013 15.8 0.2 0.02 15.2 0.2 1.3 1 0 0 1 1 1 0 Coiled-coil domain-containing protein 117 Tmpp129 PF10272.9 gi|15922176|ref|NP_377845.1| - 0.51 9.6 2.2 0.6 9.3 2.2 1.2 1 0 0 1 1 1 0 Putative transmembrane protein precursor ThiC_Rad_SAM PF01964.18 gi|15922177|ref|NP_377846.1| - 7.7e-165 548.7 0.0 9e-165 548.5 0.0 1.0 1 0 0 1 1 1 1 Radical SAM ThiC family Pyr_redox_2 PF07992.14 gi|15922178|ref|NP_377847.1| - 8e-48 163.2 0.1 1.1e-47 162.7 0.1 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|15922178|ref|NP_377847.1| - 9.1e-18 64.6 6.0 3.9e-12 46.6 0.5 3.4 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|15922178|ref|NP_377847.1| - 5.8e-14 52.3 0.0 1.6e-13 50.9 0.0 1.8 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GIDA PF01134.22 gi|15922178|ref|NP_377847.1| - 1.1e-13 51.1 1.1 0.00018 20.7 0.4 4.1 3 1 0 3 3 3 3 Glucose inhibited division protein A Pyr_redox_3 PF13738.6 gi|15922178|ref|NP_377847.1| - 1.1e-10 41.3 2.5 2e-07 30.6 0.1 2.2 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|15922178|ref|NP_377847.1| - 2.3e-09 37.3 2.6 0.00053 20.2 0.2 3.3 3 0 0 3 3 3 2 NAD(P)-binding Rossmann-like domain FAD_oxidored PF12831.7 gi|15922178|ref|NP_377847.1| - 4.5e-08 32.9 0.2 2.1e-06 27.4 0.0 2.3 2 0 0 2 2 2 1 FAD dependent oxidoreductase FAD_binding_2 PF00890.24 gi|15922178|ref|NP_377847.1| - 8.8e-08 31.6 2.6 0.0011 18.1 0.3 3.2 3 0 0 3 3 3 2 FAD binding domain HI0933_like PF03486.14 gi|15922178|ref|NP_377847.1| - 1.3e-07 30.7 3.6 7.2e-06 25.0 0.4 3.1 3 1 1 4 4 4 2 HI0933-like protein AlaDh_PNT_C PF01262.21 gi|15922178|ref|NP_377847.1| - 0.00011 21.5 0.2 0.49 9.6 0.0 2.4 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain FAD_binding_3 PF01494.19 gi|15922178|ref|NP_377847.1| - 0.0003 20.2 0.8 0.029 13.6 0.0 2.2 2 0 0 2 2 2 2 FAD binding domain DAO PF01266.24 gi|15922178|ref|NP_377847.1| - 0.025 14.2 5.3 0.83 9.2 0.2 3.2 2 1 1 3 3 3 0 FAD dependent oxidoreductase Thi4 PF01946.17 gi|15922178|ref|NP_377847.1| - 0.052 12.8 0.2 0.21 10.8 0.1 2.0 2 0 0 2 2 2 0 Thi4 family Epimerase PF01370.21 gi|15922179|ref|NP_377848.1| - 1.6e-15 57.2 0.0 2.2e-15 56.8 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family NAD_binding_4 PF07993.12 gi|15922179|ref|NP_377848.1| - 3.3e-07 29.7 0.0 4.8e-07 29.2 0.0 1.3 1 0 0 1 1 1 1 Male sterility protein 3Beta_HSD PF01073.19 gi|15922179|ref|NP_377848.1| - 3.3e-07 29.6 0.1 5e-07 29.0 0.1 1.2 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family NmrA PF05368.13 gi|15922179|ref|NP_377848.1| - 1.8e-06 27.7 0.1 6.7e-06 25.8 0.1 1.9 1 1 0 1 1 1 1 NmrA-like family Sacchrp_dh_NADP PF03435.18 gi|15922179|ref|NP_377848.1| - 3.3e-06 27.4 0.1 6.2e-06 26.5 0.1 1.4 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain NAD_binding_10 PF13460.6 gi|15922179|ref|NP_377848.1| - 1e-05 25.6 0.0 1.2e-05 25.3 0.0 1.2 1 0 0 1 1 1 1 NAD(P)H-binding RmlD_sub_bind PF04321.17 gi|15922179|ref|NP_377848.1| - 0.00011 21.4 0.0 0.00015 21.0 0.0 1.3 1 0 0 1 1 1 1 RmlD substrate binding domain Pyr_redox PF00070.27 gi|15922179|ref|NP_377848.1| - 0.00073 20.1 0.3 0.004 17.7 0.2 2.3 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase TrkA_N PF02254.18 gi|15922179|ref|NP_377848.1| - 0.0018 18.5 0.2 0.0032 17.7 0.2 1.4 1 0 0 1 1 1 1 TrkA-N domain AlaDh_PNT_C PF01262.21 gi|15922179|ref|NP_377848.1| - 0.0058 16.0 0.0 0.008 15.5 0.0 1.2 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain Shikimate_DH PF01488.20 gi|15922179|ref|NP_377848.1| - 0.052 13.6 0.2 0.085 12.9 0.2 1.4 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase TrmB PF01978.19 gi|15922180|ref|NP_377849.1| - 6.6e-16 58.0 0.0 8.6e-16 57.6 0.0 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|15922180|ref|NP_377849.1| - 7e-09 35.4 0.0 1.1e-08 34.8 0.0 1.4 1 0 0 1 1 1 1 MarR family MarR PF01047.22 gi|15922180|ref|NP_377849.1| - 2.1e-08 34.0 0.0 3.1e-08 33.4 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|15922180|ref|NP_377849.1| - 7.2e-07 28.7 0.0 1.1e-06 28.0 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_27 PF13463.6 gi|15922180|ref|NP_377849.1| - 0.00011 22.6 0.0 0.00023 21.6 0.0 1.6 1 1 1 2 2 2 1 Winged helix DNA-binding domain TFIIE_alpha PF02002.17 gi|15922180|ref|NP_377849.1| - 0.00027 20.7 0.0 0.00033 20.5 0.0 1.2 1 0 0 1 1 1 1 TFIIE alpha subunit Mga PF05043.13 gi|15922180|ref|NP_377849.1| - 0.00064 20.2 0.2 0.0011 19.5 0.2 1.5 1 1 0 1 1 1 1 Mga helix-turn-helix domain HTH_29 PF13551.6 gi|15922180|ref|NP_377849.1| - 0.0016 18.4 0.0 0.0025 17.8 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn helix Fe_dep_repress PF01325.19 gi|15922180|ref|NP_377849.1| - 0.0018 18.4 0.1 0.0032 17.6 0.1 1.4 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain DUF4423 PF14394.6 gi|15922180|ref|NP_377849.1| - 0.0063 16.2 0.0 0.008 15.9 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_5 PF01022.20 gi|15922180|ref|NP_377849.1| - 0.0068 16.3 0.1 0.012 15.5 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family DUF2250 PF10007.9 gi|15922180|ref|NP_377849.1| - 0.0073 16.4 0.0 0.013 15.6 0.0 1.4 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_34 PF13601.6 gi|15922180|ref|NP_377849.1| - 0.0073 16.5 0.0 0.011 15.9 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_IclR PF09339.10 gi|15922180|ref|NP_377849.1| - 0.0074 16.1 0.0 0.011 15.6 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_36 PF13730.6 gi|15922180|ref|NP_377849.1| - 0.011 15.7 0.0 0.017 15.1 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain GntR PF00392.21 gi|15922180|ref|NP_377849.1| - 0.013 15.2 0.1 0.029 14.0 0.0 1.6 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family HTH_11 PF08279.12 gi|15922180|ref|NP_377849.1| - 0.025 14.5 0.0 0.048 13.6 0.0 1.5 1 0 0 1 1 1 0 HTH domain HTH_Crp_2 PF13545.6 gi|15922180|ref|NP_377849.1| - 0.028 14.4 0.0 0.052 13.5 0.0 1.4 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain HTH_20 PF12840.7 gi|15922180|ref|NP_377849.1| - 0.069 13.2 0.0 0.11 12.6 0.0 1.3 1 0 0 1 1 1 0 Helix-turn-helix domain Dimerisation2 PF16864.5 gi|15922180|ref|NP_377849.1| - 0.073 13.1 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 Dimerisation domain adh_short_C2 PF13561.6 gi|15922181|ref|NP_377850.1| - 6e-64 215.8 0.1 7.8e-64 215.4 0.1 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|15922181|ref|NP_377850.1| - 4.1e-52 176.5 0.0 5.6e-52 176.0 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|15922181|ref|NP_377850.1| - 3.5e-12 46.6 0.0 5.5e-12 46.0 0.0 1.3 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|15922181|ref|NP_377850.1| - 1.5e-07 31.1 0.2 2.6e-07 30.3 0.2 1.6 1 1 0 1 1 1 1 NAD dependent epimerase/dehydratase family NmrA PF05368.13 gi|15922181|ref|NP_377850.1| - 1e-06 28.5 0.1 4.1e-06 26.5 0.0 1.9 2 0 0 2 2 2 1 NmrA-like family NAD_binding_10 PF13460.6 gi|15922181|ref|NP_377850.1| - 2.3e-05 24.4 0.1 6.8e-05 22.8 0.1 1.7 2 0 0 2 2 2 1 NAD(P)H-binding 3Beta_HSD PF01073.19 gi|15922181|ref|NP_377850.1| - 0.00022 20.4 0.0 0.00049 19.2 0.0 1.6 2 0 0 2 2 2 1 3-beta hydroxysteroid dehydrogenase/isomerase family F420_oxidored PF03807.17 gi|15922181|ref|NP_377850.1| - 0.0085 16.7 0.1 0.53 10.9 0.1 2.5 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent GDP_Man_Dehyd PF16363.5 gi|15922181|ref|NP_377850.1| - 0.014 14.8 0.2 0.025 14.0 0.1 1.5 2 0 0 2 2 2 0 GDP-mannose 4,6 dehydratase TrkA_N PF02254.18 gi|15922181|ref|NP_377850.1| - 0.017 15.4 0.5 0.048 13.9 0.2 1.9 2 0 0 2 2 2 0 TrkA-N domain Polysacc_synt_2 PF02719.15 gi|15922181|ref|NP_377850.1| - 0.055 12.6 0.0 0.078 12.1 0.0 1.3 1 0 0 1 1 1 0 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 gi|15922181|ref|NP_377850.1| - 0.085 12.0 0.2 2.2 7.4 0.2 2.2 1 1 0 1 1 1 0 Male sterility protein Glyco_transf_28 PF03033.20 gi|15922181|ref|NP_377850.1| - 0.11 12.6 0.1 0.36 10.9 0.0 1.9 2 0 0 2 2 2 0 Glycosyltransferase family 28 N-terminal domain ACT PF01842.25 gi|15922181|ref|NP_377850.1| - 0.11 12.3 0.0 0.3 10.9 0.0 1.7 1 0 0 1 1 1 0 ACT domain UPF0728 PF15092.6 gi|15922182|ref|NP_377851.1| - 0.011 15.6 0.6 0.02 14.7 0.2 1.6 2 0 0 2 2 2 0 Uncharacterised protein family UPF0728 CCG PF02754.16 gi|15922183|ref|NP_377852.1| - 3e-29 101.0 0.2 1.1e-16 60.7 0.0 2.6 3 0 0 3 3 3 2 Cysteine-rich domain Fer4_8 PF13183.6 gi|15922184|ref|NP_377853.1| - 5.2e-09 36.4 7.1 8.5e-09 35.7 7.1 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15922184|ref|NP_377853.1| - 1.5e-08 34.7 9.7 9.5e-08 32.1 10.5 1.8 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|15922184|ref|NP_377853.1| - 6.2e-08 33.1 4.2 1e-07 32.4 4.2 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15922184|ref|NP_377853.1| - 5.6e-07 30.0 6.6 8.6e-07 29.4 6.6 1.3 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15922184|ref|NP_377853.1| - 3e-05 24.9 3.1 0.0044 17.9 0.5 2.3 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_10 PF13237.6 gi|15922184|ref|NP_377853.1| - 0.0027 17.8 10.9 0.013 15.6 11.4 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|15922184|ref|NP_377853.1| - 0.016 16.1 4.4 0.96 10.3 0.4 2.3 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15922184|ref|NP_377853.1| - 0.031 14.8 13.6 0.46 11.1 3.5 2.2 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_21 PF14697.6 gi|15922184|ref|NP_377853.1| - 0.2 11.8 10.0 1.3 9.2 10.0 2.0 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_20 PF14691.6 gi|15922184|ref|NP_377853.1| - 0.27 11.0 7.5 0.094 12.5 1.0 2.2 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster Fer4 PF00037.27 gi|15922184|ref|NP_377853.1| - 0.27 11.1 13.3 0.28 11.1 2.1 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_2 PF12797.7 gi|15922184|ref|NP_377853.1| - 0.36 11.0 14.0 0.22 11.7 2.1 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Borrelia_lipo_1 PF05714.11 gi|15922185|ref|NP_377854.1| - 0.057 13.2 8.4 0.089 12.6 8.4 1.3 1 0 0 1 1 1 0 Borrelia burgdorferi virulent strain associated lipoprotein TetR_C_19 PF17924.1 gi|15922185|ref|NP_377854.1| - 4.8 7.8 8.4 1 10.0 2.7 2.5 3 0 0 3 3 3 0 Tetracyclin repressor-like, C-terminal domain Pyr_redox_2 PF07992.14 gi|15922186|ref|NP_377855.1| - 8.1e-19 67.9 0.0 1.1e-18 67.5 0.0 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FAD_binding_3 PF01494.19 gi|15922186|ref|NP_377855.1| - 1.3e-09 37.8 0.4 1.8e-07 30.7 0.5 2.2 1 1 1 2 2 2 1 FAD binding domain HI0933_like PF03486.14 gi|15922186|ref|NP_377855.1| - 2.7e-09 36.2 0.9 0.00053 18.8 0.3 2.1 1 1 0 2 2 2 2 HI0933-like protein FAD_binding_2 PF00890.24 gi|15922186|ref|NP_377855.1| - 4.1e-09 36.0 0.5 8.2e-06 25.1 0.5 2.1 1 1 1 2 2 2 2 FAD binding domain Pyr_redox_3 PF13738.6 gi|15922186|ref|NP_377855.1| - 1.1e-07 31.4 0.8 3.2e-07 29.9 0.8 1.7 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Amino_oxidase PF01593.24 gi|15922186|ref|NP_377855.1| - 1.5e-07 31.1 0.2 0.073 12.3 0.0 3.1 3 0 0 3 3 3 2 Flavin containing amine oxidoreductase FAD_oxidored PF12831.7 gi|15922186|ref|NP_377855.1| - 4e-07 29.7 2.4 6.2e-06 25.8 0.8 2.2 1 1 1 2 2 2 1 FAD dependent oxidoreductase GIDA PF01134.22 gi|15922186|ref|NP_377855.1| - 6.6e-07 28.8 0.5 0.00044 19.4 0.1 2.7 3 0 0 3 3 3 2 Glucose inhibited division protein A Pyr_redox PF00070.27 gi|15922186|ref|NP_377855.1| - 1.6e-06 28.6 1.9 0.0014 19.1 0.1 2.4 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|15922186|ref|NP_377855.1| - 3.8e-06 26.7 0.0 0.00032 20.4 0.0 2.5 3 0 0 3 3 3 1 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|15922186|ref|NP_377855.1| - 1.8e-05 24.9 0.0 4e-05 23.8 0.0 1.6 1 0 0 1 1 1 1 NAD(P)-binding Rossmann-like domain Thi4 PF01946.17 gi|15922186|ref|NP_377855.1| - 4.8e-05 22.7 0.0 7.4e-05 22.1 0.0 1.4 1 0 0 1 1 1 1 Thi4 family NAD_binding_9 PF13454.6 gi|15922186|ref|NP_377855.1| - 0.00021 21.3 0.0 0.1 12.6 0.0 3.0 3 0 0 3 3 3 1 FAD-NAD(P)-binding Lycopene_cycl PF05834.12 gi|15922186|ref|NP_377855.1| - 0.0017 17.5 0.4 0.0036 16.4 0.3 1.6 1 1 0 2 2 2 1 Lycopene cyclase protein AlaDh_PNT_C PF01262.21 gi|15922186|ref|NP_377855.1| - 0.0082 15.5 0.7 0.017 14.4 0.7 1.5 1 0 0 1 1 1 1 Alanine dehydrogenase/PNT, C-terminal domain IlvN PF07991.12 gi|15922186|ref|NP_377855.1| - 0.025 14.1 0.0 0.052 13.1 0.0 1.6 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_binding_7 PF13241.6 gi|15922186|ref|NP_377855.1| - 0.035 14.5 0.1 0.082 13.4 0.1 1.7 1 1 0 1 1 1 0 Putative NAD(P)-binding K_oxygenase PF13434.6 gi|15922186|ref|NP_377855.1| - 0.036 13.2 0.2 0.24 10.5 0.0 2.0 2 0 0 2 2 2 0 L-lysine 6-monooxygenase (NADPH-requiring) Shikimate_DH PF01488.20 gi|15922186|ref|NP_377855.1| - 0.094 12.8 0.1 0.19 11.8 0.1 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase Trp_halogenase PF04820.14 gi|15922186|ref|NP_377855.1| - 0.34 9.7 1.2 2.4 6.9 0.2 2.1 2 0 0 2 2 2 0 Tryptophan halogenase CCG PF02754.16 gi|15922187|ref|NP_377856.1| - 2.2e-07 31.0 0.0 1.4e-05 25.2 0.0 3.0 2 1 0 2 2 2 1 Cysteine-rich domain Fer4_8 PF13183.6 gi|15922188|ref|NP_377857.1| - 1.3e-07 31.9 14.8 1e-06 29.1 6.9 2.0 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|15922188|ref|NP_377857.1| - 1.4e-07 31.9 6.6 3.4e-07 30.7 6.6 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15922188|ref|NP_377857.1| - 5.5e-07 29.6 6.1 1.1e-06 28.6 6.1 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15922188|ref|NP_377857.1| - 2.1e-06 27.8 8.3 1.3e-05 25.3 9.0 1.9 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15922188|ref|NP_377857.1| - 2.2e-06 28.2 6.0 4.8e-06 27.1 6.0 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15922188|ref|NP_377857.1| - 0.00099 19.1 12.5 0.025 14.7 3.6 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|15922188|ref|NP_377857.1| - 0.0017 19.2 9.2 0.007 17.3 8.9 2.2 1 1 1 2 2 2 2 4Fe-4S double cluster binding domain Fer4_4 PF12800.7 gi|15922188|ref|NP_377857.1| - 0.0039 17.6 11.3 0.0047 17.3 1.1 2.3 2 0 0 2 2 2 1 4Fe-4S binding domain CDC37_C PF08564.10 gi|15922188|ref|NP_377857.1| - 0.091 12.9 2.7 0.26 11.5 1.3 2.1 2 0 0 2 2 2 0 Cdc37 C terminal domain Fer4_20 PF14691.6 gi|15922188|ref|NP_377857.1| - 0.12 12.1 6.4 0.2 11.4 0.3 2.3 1 1 1 2 2 2 0 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AF0941-like PF14591.6 gi|15922188|ref|NP_377857.1| - 0.14 12.7 4.1 0.62 10.7 3.3 2.1 2 0 0 2 2 2 0 AF0941-like Fer4_21 PF14697.6 gi|15922188|ref|NP_377857.1| - 0.14 12.3 10.7 1.8 8.8 10.9 2.2 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15922188|ref|NP_377857.1| - 0.16 12.1 12.9 1.1 9.5 2.1 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4 PF00037.27 gi|15922188|ref|NP_377857.1| - 0.35 10.8 16.9 0.17 11.8 2.8 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 gi|15922188|ref|NP_377857.1| - 5.3 7.7 8.2 4.9 7.8 0.3 2.7 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I TusA PF01206.17 gi|15922189|ref|NP_377858.1| - 1.6e-23 82.3 0.0 1.8e-23 82.2 0.0 1.0 1 0 0 1 1 1 1 Sulfurtransferase TusA DrsE_2 PF13686.6 gi|15922190|ref|NP_377859.1| - 1.2e-22 80.5 3.2 4.8e-21 75.3 3.2 2.0 1 1 0 1 1 1 1 DsrE/DsrF/DrsH-like family DrsE PF02635.15 gi|15922190|ref|NP_377859.1| - 4.7e-10 39.8 0.0 9.6e-10 38.9 0.0 1.4 1 1 0 1 1 1 1 DsrE/DsrF-like family SinI PF08671.10 gi|15922190|ref|NP_377859.1| - 0.09 12.6 0.0 0.19 11.6 0.0 1.5 1 0 0 1 1 1 0 Anti-repressor SinI DrsE PF02635.15 gi|15922191|ref|NP_377860.1| - 1.5e-22 80.1 0.0 1.7e-22 80.0 0.0 1.0 1 0 0 1 1 1 1 DsrE/DsrF-like family DrsE_2 PF13686.6 gi|15922191|ref|NP_377860.1| - 4.3e-14 52.7 0.3 3.5e-06 27.0 0.0 2.0 1 1 1 2 2 2 2 DsrE/DsrF/DrsH-like family Pyr_redox_2 PF07992.14 gi|15922193|ref|NP_377862.1| - 9.3e-52 176.1 3.3 1.2e-51 175.8 3.3 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|15922193|ref|NP_377862.1| - 2.1e-20 73.2 4.3 2.8e-20 72.8 4.3 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|15922193|ref|NP_377862.1| - 7e-16 58.5 0.1 2e-15 57.0 0.0 1.9 2 0 0 2 2 1 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox PF00070.27 gi|15922193|ref|NP_377862.1| - 1.3e-15 57.7 10.1 8.9e-14 51.8 0.8 3.3 3 0 0 3 3 3 2 Pyridine nucleotide-disulphide oxidoreductase GIDA PF01134.22 gi|15922193|ref|NP_377862.1| - 3.9e-10 39.4 11.1 2.7e-05 23.5 0.1 4.2 3 1 2 5 5 5 2 Glucose inhibited division protein A FAD_binding_2 PF00890.24 gi|15922193|ref|NP_377862.1| - 5.7e-09 35.5 8.2 1.2e-06 27.9 1.1 3.1 3 0 0 3 3 3 2 FAD binding domain FAD_binding_3 PF01494.19 gi|15922193|ref|NP_377862.1| - 4e-08 32.9 0.9 0.00012 21.4 0.2 2.2 2 0 0 2 2 2 2 FAD binding domain HI0933_like PF03486.14 gi|15922193|ref|NP_377862.1| - 5.3e-07 28.7 3.6 0.0018 17.1 0.5 3.2 3 0 0 3 3 3 2 HI0933-like protein FAD_oxidored PF12831.7 gi|15922193|ref|NP_377862.1| - 8.5e-07 28.7 4.5 3.2e-05 23.5 0.4 2.3 2 0 0 2 2 2 2 FAD dependent oxidoreductase Thi4 PF01946.17 gi|15922193|ref|NP_377862.1| - 1.6e-06 27.5 5.7 0.00012 21.4 0.5 3.1 3 0 0 3 3 3 2 Thi4 family AlaDh_PNT_C PF01262.21 gi|15922193|ref|NP_377862.1| - 1.9e-06 27.3 4.1 5.5e-05 22.6 0.1 2.3 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain Trp_halogenase PF04820.14 gi|15922193|ref|NP_377862.1| - 2.4e-06 26.7 4.1 4.1e-05 22.6 0.3 2.2 2 0 0 2 2 2 2 Tryptophan halogenase K_oxygenase PF13434.6 gi|15922193|ref|NP_377862.1| - 7.3e-06 25.4 0.3 0.00019 20.7 0.0 2.4 2 1 0 3 3 3 1 L-lysine 6-monooxygenase (NADPH-requiring) DAO PF01266.24 gi|15922193|ref|NP_377862.1| - 5.2e-05 23.0 11.6 0.0036 16.9 1.9 3.4 3 1 1 4 4 4 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|15922193|ref|NP_377862.1| - 7.3e-05 22.9 6.1 0.0048 17.1 1.1 2.4 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain NAD_binding_7 PF13241.6 gi|15922193|ref|NP_377862.1| - 0.00053 20.4 0.1 0.19 12.2 0.0 2.6 2 0 0 2 2 2 1 Putative NAD(P)-binding 3HCDH_N PF02737.18 gi|15922193|ref|NP_377862.1| - 0.0017 18.3 2.5 0.0027 17.6 0.1 2.2 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain Lycopene_cycl PF05834.12 gi|15922193|ref|NP_377862.1| - 0.0022 17.1 0.3 0.33 10.0 0.1 2.3 2 0 0 2 2 2 1 Lycopene cyclase protein 2-Hacid_dh_C PF02826.19 gi|15922193|ref|NP_377862.1| - 0.0037 16.6 0.0 0.045 13.1 0.0 2.4 2 0 0 2 2 2 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain NAD_Gly3P_dh_N PF01210.23 gi|15922193|ref|NP_377862.1| - 0.0057 16.6 0.5 0.092 12.7 0.0 2.5 2 0 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus TrkA_N PF02254.18 gi|15922193|ref|NP_377862.1| - 0.44 10.8 7.2 2.7 8.3 0.2 3.1 3 0 0 3 3 3 0 TrkA-N domain KH_7 PF17214.3 gi|15922193|ref|NP_377862.1| - 5 7.2 5.6 1.8 8.6 0.2 3.0 4 0 0 4 4 4 0 KH domain Thioredoxin_3 PF13192.6 gi|15922195|ref|NP_377864.1| - 9.4e-12 44.8 0.0 3.3e-11 43.1 0.0 1.8 2 0 0 2 2 2 1 Thioredoxin domain DUF836 PF05768.14 gi|15922195|ref|NP_377864.1| - 0.00014 22.2 0.2 0.00035 20.9 0.0 1.7 2 0 0 2 2 2 1 Glutaredoxin-like domain (DUF836) Glutaredoxin PF00462.24 gi|15922195|ref|NP_377864.1| - 0.0089 16.2 0.0 0.023 14.9 0.0 1.7 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin PF00085.20 gi|15922195|ref|NP_377864.1| - 0.015 15.3 0.0 0.036 14.1 0.0 1.7 2 0 0 2 2 2 0 Thioredoxin Thioredoxin_2 PF13098.6 gi|15922195|ref|NP_377864.1| - 0.025 15.0 0.0 0.036 14.5 0.0 1.4 1 1 0 1 1 1 0 Thioredoxin-like domain PIN_5 PF08745.11 gi|15922196|ref|NP_377865.1| - 5.8e-05 22.6 0.0 8.9e-05 22.0 0.0 1.3 1 0 0 1 1 1 1 PINc domain ribonuclease PIF6 PF05341.11 gi|15922196|ref|NP_377865.1| - 0.085 13.0 0.1 0.098 12.8 0.1 1.4 1 1 0 1 1 1 0 Per os infectivity factor 6 DUF1641 PF07849.11 gi|15922197|ref|NP_377866.1| - 4.4e-11 42.5 0.0 1.2e-10 41.1 0.0 1.8 1 0 0 1 1 1 1 Protein of unknown function (DUF1641) MgtE_N PF03448.17 gi|15922197|ref|NP_377866.1| - 0.00015 22.3 39.1 2.8 8.6 5.5 7.7 1 1 5 6 6 6 4 MgtE intracellular N domain Baculo_F PF12259.8 gi|15922197|ref|NP_377866.1| - 0.016 13.7 4.3 0.94 7.9 0.2 3.0 1 1 1 3 3 3 0 Baculovirus F protein HEAT PF02985.22 gi|15922197|ref|NP_377866.1| - 0.21 11.9 3.6 38 4.9 0.0 5.2 5 0 0 5 5 5 0 HEAT repeat ApeA_NTD1 PF18862.1 gi|15922197|ref|NP_377866.1| - 0.28 10.7 0.9 8.9 5.8 0.1 2.2 2 0 0 2 2 2 0 ApeA N-terminal domain 1 DASH_Dad2 PF08654.10 gi|15922197|ref|NP_377866.1| - 0.49 10.9 6.3 2.8 8.4 0.2 3.0 2 1 0 2 2 2 0 DASH complex subunit Dad2 DUF3847 PF12958.7 gi|15922197|ref|NP_377866.1| - 1.7 8.9 11.1 91 3.3 0.1 6.0 6 1 1 7 7 7 0 Protein of unknown function (DUF3847) Sin3_corepress PF08295.12 gi|15922197|ref|NP_377866.1| - 3.2 7.9 4.4 47 4.1 0.1 3.9 3 1 1 4 4 4 0 Sin3 family co-repressor Hist_deacetyl PF00850.19 gi|15922198|ref|NP_377867.1| - 2.2e-52 178.4 0.0 3.6e-52 177.8 0.0 1.2 1 0 0 1 1 1 1 Histone deacetylase domain Baculo_LEF-2 PF03041.14 gi|15922198|ref|NP_377867.1| - 0.021 14.5 0.3 4.7 6.8 0.1 2.5 2 1 0 2 2 2 0 lef-2 Peptidase_M23 PF01551.22 gi|15922199|ref|NP_377868.1| - 0.0011 19.1 0.0 0.0026 17.9 0.0 1.6 1 1 0 1 1 1 1 Peptidase family M23 PTS_EIIA_1 PF00358.20 gi|15922199|ref|NP_377868.1| - 0.068 12.9 0.0 0.14 11.9 0.0 1.4 1 0 0 1 1 1 0 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 Radical_SAM PF04055.21 gi|15922200|ref|NP_377869.1| - 4.3e-11 43.5 0.8 1.6e-10 41.6 0.1 2.0 2 0 0 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|15922200|ref|NP_377869.1| - 0.03 14.6 0.0 0.058 13.7 0.0 1.4 1 0 0 1 1 1 0 4Fe-4S single cluster domain Radical_SAM PF04055.21 gi|15922201|ref|NP_377870.1| - 7.6e-13 49.2 0.1 7.6e-11 42.7 0.0 2.4 1 1 0 2 2 2 2 Radical SAM superfamily Fer4_12 PF13353.6 gi|15922201|ref|NP_377870.1| - 0.016 15.5 0.1 0.027 14.7 0.1 1.3 1 0 0 1 1 1 0 4Fe-4S single cluster domain BPL_LplA_LipB PF03099.19 gi|15922202|ref|NP_377871.1| - 2.5e-09 37.1 0.0 6.5e-09 35.8 0.0 1.6 2 0 0 2 2 2 1 Biotin/lipoate A/B protein ligase family Lip_prot_lig_C PF10437.9 gi|15922202|ref|NP_377871.1| - 5.7e-05 23.0 0.7 0.00019 21.4 0.7 1.9 1 0 0 1 1 1 1 Bacterial lipoate protein ligase C-terminus TrmB PF01978.19 gi|15922203|ref|NP_377872.1| - 2.1e-09 37.1 0.2 2.7e-09 36.8 0.2 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.12 gi|15922203|ref|NP_377872.1| - 8.8e-07 28.8 0.3 1.6e-06 27.9 0.3 1.4 1 0 0 1 1 1 1 HTH domain HTH_5 PF01022.20 gi|15922203|ref|NP_377872.1| - 9.6e-07 28.6 0.1 1.7e-06 27.8 0.1 1.3 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family MarR_2 PF12802.7 gi|15922203|ref|NP_377872.1| - 5.2e-06 26.3 0.0 7.7e-06 25.7 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|15922203|ref|NP_377872.1| - 9.6e-06 26.0 0.2 1.7e-05 25.2 0.2 1.5 1 1 0 1 1 1 1 Winged helix DNA-binding domain HTH_20 PF12840.7 gi|15922203|ref|NP_377872.1| - 1.3e-05 25.2 0.0 1.8e-05 24.7 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain GntR PF00392.21 gi|15922203|ref|NP_377872.1| - 1.4e-05 24.6 0.3 4.9e-05 22.9 0.1 1.8 2 0 0 2 2 2 1 Bacterial regulatory proteins, gntR family MarR PF01047.22 gi|15922203|ref|NP_377872.1| - 3.7e-05 23.5 0.1 5.8e-05 22.9 0.1 1.4 1 0 0 1 1 1 1 MarR family HTH_Crp_2 PF13545.6 gi|15922203|ref|NP_377872.1| - 5.8e-05 23.0 0.0 8.6e-05 22.4 0.0 1.4 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_24 PF13412.6 gi|15922203|ref|NP_377872.1| - 6.3e-05 22.5 0.0 0.0001 21.8 0.0 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_DeoR PF08220.12 gi|15922203|ref|NP_377872.1| - 0.00012 21.8 0.6 0.00024 20.8 0.1 1.7 2 0 0 2 2 2 1 DeoR-like helix-turn-helix domain TFIIE_alpha PF02002.17 gi|15922203|ref|NP_377872.1| - 0.0002 21.2 1.0 0.00025 20.8 0.6 1.4 1 1 0 1 1 1 1 TFIIE alpha subunit DUF4423 PF14394.6 gi|15922203|ref|NP_377872.1| - 0.0002 21.1 0.4 0.00041 20.1 0.4 1.5 1 1 0 1 1 1 1 Domain of unknown function (DUF4423) SMC_ScpB PF04079.16 gi|15922203|ref|NP_377872.1| - 0.00041 20.0 0.1 0.00051 19.7 0.1 1.2 1 0 0 1 1 1 1 Segregation and condensation complex subunit ScpB HTH_36 PF13730.6 gi|15922203|ref|NP_377872.1| - 0.00053 19.9 0.1 0.00089 19.2 0.1 1.6 1 1 0 1 1 1 1 Helix-turn-helix domain Fe_dep_repress PF01325.19 gi|15922203|ref|NP_377872.1| - 0.00084 19.5 0.1 0.0015 18.7 0.1 1.6 1 1 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain Rrf2 PF02082.20 gi|15922203|ref|NP_377872.1| - 0.00094 19.5 0.2 0.0024 18.2 0.1 1.7 2 0 0 2 2 2 1 Transcriptional regulator PadR PF03551.14 gi|15922203|ref|NP_377872.1| - 0.0011 18.9 0.1 0.042 13.8 0.1 2.1 2 0 0 2 2 2 1 Transcriptional regulator PadR-like family HTH_IclR PF09339.10 gi|15922203|ref|NP_377872.1| - 0.0029 17.4 0.0 0.0041 16.9 0.0 1.2 1 0 0 1 1 1 1 IclR helix-turn-helix domain Phage_rep_O PF04492.13 gi|15922203|ref|NP_377872.1| - 0.0038 17.8 0.1 0.0076 16.8 0.1 1.5 1 1 0 1 1 1 1 Bacteriophage replication protein O HrcA_DNA-bdg PF03444.15 gi|15922203|ref|NP_377872.1| - 0.004 16.8 0.2 0.0068 16.0 0.2 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding RP-C PF03428.13 gi|15922203|ref|NP_377872.1| - 0.0068 16.1 0.0 0.05 13.3 0.0 1.9 1 1 1 2 2 2 1 Replication protein C N-terminal domain HTH_10 PF04967.12 gi|15922203|ref|NP_377872.1| - 0.015 15.0 0.0 0.037 13.8 0.0 1.6 1 0 0 1 1 1 0 HTH DNA binding domain Phage_rep_org_N PF09681.10 gi|15922203|ref|NP_377872.1| - 0.016 15.2 0.1 0.024 14.5 0.1 1.4 1 1 0 1 1 1 0 N-terminal phage replisome organiser (Phage_rep_org_N) PCI PF01399.27 gi|15922203|ref|NP_377872.1| - 0.039 14.5 0.2 0.083 13.4 0.2 1.4 1 0 0 1 1 1 0 PCI domain Tfb2 PF03849.14 gi|15922203|ref|NP_377872.1| - 0.04 12.9 0.0 0.042 12.8 0.0 1.0 1 0 0 1 1 1 0 Transcription factor Tfb2 Replic_Relax PF13814.6 gi|15922203|ref|NP_377872.1| - 0.043 13.9 0.0 0.051 13.6 0.0 1.1 1 0 0 1 1 1 0 Replication-relaxation DUF2250 PF10007.9 gi|15922203|ref|NP_377872.1| - 0.048 13.8 0.5 0.079 13.1 0.5 1.5 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) FeoC PF09012.10 gi|15922203|ref|NP_377872.1| - 0.053 13.6 0.0 0.099 12.7 0.0 1.5 1 0 0 1 1 1 0 FeoC like transcriptional regulator B-block_TFIIIC PF04182.12 gi|15922203|ref|NP_377872.1| - 0.071 13.3 0.2 0.12 12.6 0.1 1.5 1 1 0 1 1 1 0 B-block binding subunit of TFIIIC HTH_17 PF12728.7 gi|15922203|ref|NP_377872.1| - 0.087 13.0 0.1 0.26 11.5 0.1 1.9 1 1 0 1 1 1 0 Helix-turn-helix domain TusA PF01206.17 gi|15922204|ref|NP_377873.1| - 4.8e-13 48.7 0.3 5.6e-13 48.5 0.3 1.1 1 0 0 1 1 1 1 Sulfurtransferase TusA G6PD_C PF02781.16 gi|15922204|ref|NP_377873.1| - 0.12 11.5 0.1 0.15 11.3 0.1 1.0 1 0 0 1 1 1 0 Glucose-6-phosphate dehydrogenase, C-terminal domain TrmB PF01978.19 gi|15922206|ref|NP_377875.1| - 2.2e-14 53.1 0.2 2.9e-14 52.7 0.2 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|15922206|ref|NP_377875.1| - 1.5e-09 37.7 0.2 2.4e-09 37.0 0.2 1.3 1 0 0 1 1 1 1 MarR family HTH_24 PF13412.6 gi|15922206|ref|NP_377875.1| - 3.4e-08 32.9 0.1 5.9e-08 32.1 0.1 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR_2 PF12802.7 gi|15922206|ref|NP_377875.1| - 6.1e-08 32.4 0.0 7.9e-08 32.1 0.0 1.2 1 0 0 1 1 1 1 MarR family TFIIE_alpha PF02002.17 gi|15922206|ref|NP_377875.1| - 6.1e-07 29.3 0.7 8.9e-07 28.7 0.7 1.4 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_Crp_2 PF13545.6 gi|15922206|ref|NP_377875.1| - 0.00055 19.9 0.0 0.00086 19.2 0.0 1.3 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_5 PF01022.20 gi|15922206|ref|NP_377875.1| - 0.00058 19.7 0.1 0.001 18.9 0.1 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family GntR PF00392.21 gi|15922206|ref|NP_377875.1| - 0.00069 19.2 0.1 0.0012 18.4 0.1 1.5 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family Fe_dep_repress PF01325.19 gi|15922206|ref|NP_377875.1| - 0.00078 19.6 0.1 0.0015 18.7 0.1 1.6 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain Penicillinase_R PF03965.16 gi|15922206|ref|NP_377875.1| - 0.0008 19.7 0.1 0.0012 19.2 0.1 1.3 1 0 0 1 1 1 1 Penicillinase repressor HTH_DeoR PF08220.12 gi|15922206|ref|NP_377875.1| - 0.00083 19.1 0.2 0.0016 18.1 0.2 1.4 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain HTH_IclR PF09339.10 gi|15922206|ref|NP_377875.1| - 0.0012 18.6 0.0 0.0016 18.2 0.0 1.3 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_27 PF13463.6 gi|15922206|ref|NP_377875.1| - 0.0015 19.0 0.1 0.0029 18.1 0.1 1.6 1 1 0 1 1 1 1 Winged helix DNA-binding domain Rio2_N PF09202.11 gi|15922206|ref|NP_377875.1| - 0.0018 18.4 0.5 0.0033 17.6 0.3 1.6 1 1 0 1 1 1 1 Rio2, N-terminal Phage_rep_O PF04492.13 gi|15922206|ref|NP_377875.1| - 0.0026 18.3 0.3 0.0072 16.9 0.3 1.8 1 1 0 1 1 1 1 Bacteriophage replication protein O HTH_11 PF08279.12 gi|15922206|ref|NP_377875.1| - 0.0027 17.6 0.2 0.0046 16.9 0.2 1.4 1 0 0 1 1 1 1 HTH domain DUF4423 PF14394.6 gi|15922206|ref|NP_377875.1| - 0.0047 16.7 0.0 0.0073 16.0 0.0 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4423) HTH_20 PF12840.7 gi|15922206|ref|NP_377875.1| - 0.0052 16.8 0.0 0.0082 16.2 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Mga PF05043.13 gi|15922206|ref|NP_377875.1| - 0.006 17.2 0.6 0.011 16.3 0.6 1.5 1 1 0 1 1 1 1 Mga helix-turn-helix domain DUF505 PF04458.12 gi|15922206|ref|NP_377875.1| - 0.0066 14.9 0.2 0.0095 14.3 0.2 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF505) HTH_34 PF13601.6 gi|15922206|ref|NP_377875.1| - 0.0079 16.4 0.2 0.012 15.8 0.2 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain SMC_ScpB PF04079.16 gi|15922206|ref|NP_377875.1| - 0.012 15.2 0.0 0.016 14.8 0.0 1.3 1 0 0 1 1 1 0 Segregation and condensation complex subunit ScpB PadR PF03551.14 gi|15922206|ref|NP_377875.1| - 0.021 14.8 0.1 0.036 14.0 0.1 1.5 1 1 0 1 1 1 0 Transcriptional regulator PadR-like family Replic_Relax PF13814.6 gi|15922206|ref|NP_377875.1| - 0.024 14.7 0.0 0.031 14.3 0.0 1.1 1 0 0 1 1 1 0 Replication-relaxation Dimerisation2 PF16864.5 gi|15922206|ref|NP_377875.1| - 0.031 14.3 0.0 0.048 13.6 0.0 1.3 1 0 0 1 1 1 0 Dimerisation domain HTH_36 PF13730.6 gi|15922206|ref|NP_377875.1| - 0.033 14.1 0.1 0.065 13.2 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_9 PF08221.11 gi|15922206|ref|NP_377875.1| - 0.069 13.3 0.2 0.11 12.6 0.2 1.3 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain B-block_TFIIIC PF04182.12 gi|15922206|ref|NP_377875.1| - 0.11 12.7 0.6 0.28 11.4 0.2 1.7 1 1 0 2 2 2 0 B-block binding subunit of TFIIIC Rep_3 PF01051.21 gi|15922207|ref|NP_377876.1| - 0.019 14.8 0.9 0.026 14.4 0.9 1.1 1 0 0 1 1 1 0 Initiator Replication protein SapB_1 PF05184.15 gi|15922207|ref|NP_377876.1| - 0.026 14.5 0.2 0.067 13.2 0.2 1.7 1 0 0 1 1 1 0 Saposin-like type B, region 1 PqqD PF05402.12 gi|15922207|ref|NP_377876.1| - 0.026 14.8 0.1 0.047 14.0 0.1 1.4 1 0 0 1 1 1 0 Coenzyme PQQ synthesis protein D (PqqD) KAP PF05804.12 gi|15922207|ref|NP_377876.1| - 0.028 12.6 0.2 0.033 12.4 0.2 1.0 1 0 0 1 1 1 0 Kinesin-associated protein (KAP) QueC PF06508.13 gi|15922208|ref|NP_377877.1| - 1.2e-30 106.6 0.1 5.3e-29 101.2 0.1 2.0 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC ThiI PF02568.14 gi|15922208|ref|NP_377877.1| - 2.2e-06 27.4 0.0 3e-06 27.0 0.0 1.4 1 1 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) tRNA_Me_trans PF03054.16 gi|15922208|ref|NP_377877.1| - 0.0059 15.4 0.0 0.01 14.6 0.0 1.4 1 0 0 1 1 1 1 tRNA methyl transferase NAD_synthase PF02540.17 gi|15922208|ref|NP_377877.1| - 0.041 13.0 0.0 0.12 11.4 0.0 1.8 2 0 0 2 2 2 0 NAD synthase ATP_bind_3 PF01171.20 gi|15922208|ref|NP_377877.1| - 0.092 12.5 0.1 0.26 11.0 0.0 1.9 2 1 0 2 2 2 0 PP-loop family zf-ZPR1 PF03367.13 gi|15922208|ref|NP_377877.1| - 0.2 11.5 2.1 0.36 10.7 0.1 2.1 2 0 0 2 2 2 0 ZPR1 zinc-finger domain HAD_2 PF13419.6 gi|15922209|ref|NP_377878.1| - 0.0032 17.6 0.0 0.0051 16.9 0.0 1.4 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|15922209|ref|NP_377878.1| - 0.031 14.6 0.0 0.038 14.3 0.0 1.1 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase NAS PF03059.16 gi|15922209|ref|NP_377878.1| - 0.045 13.1 0.0 0.055 12.8 0.0 1.1 1 0 0 1 1 1 0 Nicotianamine synthase protein GCV_H PF01597.19 gi|15922210|ref|NP_377879.1| - 9.1e-30 103.1 1.7 1.2e-29 102.7 1.7 1.1 1 0 0 1 1 1 1 Glycine cleavage H-protein Biotin_lipoyl PF00364.22 gi|15922210|ref|NP_377879.1| - 0.0018 18.1 1.4 0.004 16.9 0.2 2.1 1 1 1 2 2 2 1 Biotin-requiring enzyme Ydr279_N PF17745.1 gi|15922210|ref|NP_377879.1| - 0.027 14.7 0.0 0.041 14.1 0.0 1.2 1 0 0 1 1 1 0 Ydr279p protein triple barrel domain Myosin_N PF02736.19 gi|15922210|ref|NP_377879.1| - 7 6.6 11.3 24 4.9 0.1 4.2 4 0 0 4 4 4 0 Myosin N-terminal SH3-like domain GCV_H PF01597.19 gi|15922211|ref|NP_377880.1| - 6.1e-42 142.4 1.2 7.3e-42 142.1 1.2 1.1 1 0 0 1 1 1 1 Glycine cleavage H-protein Biotin_lipoyl PF00364.22 gi|15922211|ref|NP_377880.1| - 1.8e-06 27.7 1.4 3.4e-06 26.8 1.4 1.4 1 0 0 1 1 1 1 Biotin-requiring enzyme RnfC_N PF13375.6 gi|15922211|ref|NP_377880.1| - 0.00042 20.2 0.2 0.00068 19.6 0.2 1.4 1 0 0 1 1 1 1 RnfC Barrel sandwich hybrid domain HlyD_D23 PF16576.5 gi|15922211|ref|NP_377880.1| - 0.0047 16.2 0.2 0.019 14.2 0.1 2.0 2 0 0 2 2 2 1 Barrel-sandwich domain of CusB or HlyD membrane-fusion Peptidase_M23 PF01551.22 gi|15922211|ref|NP_377880.1| - 0.03 14.5 0.3 1.3 9.3 0.2 2.2 1 1 1 2 2 2 0 Peptidase family M23 BPL_LplA_LipB PF03099.19 gi|15922212|ref|NP_377881.1| - 0.0014 18.5 0.1 0.0028 17.6 0.1 1.4 1 0 0 1 1 1 1 Biotin/lipoate A/B protein ligase family Lip_prot_lig_C PF10437.9 gi|15922212|ref|NP_377881.1| - 0.002 18.1 1.8 0.0024 17.8 0.4 1.9 2 0 0 2 2 2 1 Bacterial lipoate protein ligase C-terminus KMP11 PF03037.16 gi|15922212|ref|NP_377881.1| - 0.98 10.2 7.6 2.9 8.7 2.1 3.5 3 1 1 4 4 4 0 Kinetoplastid membrane protein 11 CBS PF00571.28 gi|15922213|ref|NP_377882.1| - 2.3e-45 152.8 11.7 1.6e-14 54.1 0.9 4.1 4 0 0 4 4 4 4 CBS domain Cupin_4 PF08007.12 gi|15922213|ref|NP_377882.1| - 0.055 12.9 0.0 0.071 12.6 0.0 1.1 1 0 0 1 1 1 0 Cupin superfamily protein Trehalose_PPase PF02358.16 gi|15922214|ref|NP_377883.1| - 0.094 11.8 0.0 0.13 11.3 0.0 1.2 1 0 0 1 1 1 0 Trehalose-phosphatase OsmC PF02566.19 gi|15922215|ref|NP_377884.1| - 3.8e-19 69.0 0.0 6.1e-19 68.4 0.0 1.3 1 0 0 1 1 1 1 OsmC-like protein Asp4 PF16996.5 gi|15922215|ref|NP_377884.1| - 0.046 13.5 0.4 0.2 11.5 0.3 2.0 2 0 0 2 2 2 0 Accessory secretory protein Sec Asp4 T6SS_VipA PF05591.12 gi|15922216|ref|NP_377885.1| - 0.0013 18.5 1.4 0.0034 17.2 1.3 1.6 1 1 0 1 1 1 1 Type VI secretion system, VipA, VC_A0107 or Hcp2 Glu-tRNAGln PF02686.15 gi|15922216|ref|NP_377885.1| - 0.022 15.0 2.9 0.19 12.1 0.3 2.7 2 1 1 3 3 3 0 Glu-tRNAGln amidotransferase C subunit Corona_S2 PF01601.16 gi|15922216|ref|NP_377885.1| - 0.11 10.9 3.5 0.043 12.3 1.1 1.4 1 1 0 1 1 1 0 Coronavirus S2 glycoprotein VGPC1_C PF16799.5 gi|15922216|ref|NP_377885.1| - 0.13 12.2 3.5 1.5 8.8 0.2 2.7 2 2 0 2 2 2 0 C-terminal membrane-localisation domain of ion-channel, VCN1 KorB PF08535.10 gi|15922216|ref|NP_377885.1| - 0.15 12.1 0.6 3.4 7.8 0.1 2.6 1 1 2 3 3 3 0 KorB domain GAT PF03127.14 gi|15922216|ref|NP_377885.1| - 0.2 12.0 0.2 0.2 12.0 0.2 2.2 2 1 0 2 2 2 0 GAT domain Nramp PF01566.18 gi|15922217|ref|NP_377886.1| - 1e-43 149.7 25.6 1.4e-43 149.3 25.6 1.2 1 0 0 1 1 1 1 Natural resistance-associated macrophage protein Peptidase_M28 PF04389.17 gi|15922218|ref|NP_377887.1| - 9.5e-05 22.2 0.2 0.0029 17.3 0.2 2.4 1 1 0 1 1 1 1 Peptidase family M28 Y1_Tnp PF01797.16 gi|15922219|ref|NP_377888.1| - 8.2e-43 145.4 0.0 9.4e-43 145.2 0.0 1.0 1 0 0 1 1 1 1 Transposase IS200 like OrfB_IS605 PF01385.19 gi|15922221|ref|NP_377890.1| - 5.9e-36 123.3 0.7 1e-35 122.6 0.7 1.4 1 0 0 1 1 1 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|15922221|ref|NP_377890.1| - 1.3e-19 69.9 0.0 2.8e-19 68.8 0.0 1.6 1 0 0 1 1 1 1 Putative transposase DNA-binding domain RuvX PF03652.15 gi|15922221|ref|NP_377890.1| - 0.0039 17.6 0.0 0.0072 16.7 0.0 1.4 1 0 0 1 1 1 1 Holliday junction resolvase HTH_23 PF13384.6 gi|15922222|ref|NP_377891.1| - 4.4e-08 32.7 0.1 8.8e-08 31.7 0.1 1.6 1 0 0 1 1 1 1 Homeodomain-like domain Zn_Tnp_IS1 PF03811.13 gi|15922222|ref|NP_377891.1| - 1e-05 25.1 8.7 2.7e-05 23.8 8.7 1.7 1 0 0 1 1 1 1 InsA N-terminal domain Terminase_5 PF06056.12 gi|15922222|ref|NP_377891.1| - 1.7e-05 24.6 0.1 3.7e-05 23.5 0.1 1.6 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) HTH_28 PF13518.6 gi|15922222|ref|NP_377891.1| - 3.5e-05 23.8 0.0 8.6e-05 22.6 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_38 PF13936.6 gi|15922222|ref|NP_377891.1| - 8.9e-05 22.2 0.0 0.0002 21.1 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|15922222|ref|NP_377891.1| - 0.00045 19.8 0.0 0.00086 18.9 0.0 1.4 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_Tnp_1 PF01527.20 gi|15922222|ref|NP_377891.1| - 0.0014 18.9 0.1 0.0035 17.6 0.1 1.6 1 0 0 1 1 1 1 Transposase HTH_Tnp_ISL3 PF13542.6 gi|15922222|ref|NP_377891.1| - 0.0061 15.9 0.0 0.015 14.7 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 zf-ribbon_3 PF13248.6 gi|15922222|ref|NP_377891.1| - 0.0092 15.4 3.2 0.92 9.0 0.1 2.3 2 0 0 2 2 2 2 zinc-ribbon domain HTH_29 PF13551.6 gi|15922222|ref|NP_377891.1| - 0.021 14.8 0.0 0.039 14.0 0.0 1.5 1 0 0 1 1 1 0 Winged helix-turn helix HTH_40 PF14493.6 gi|15922222|ref|NP_377891.1| - 0.042 14.3 0.0 0.089 13.3 0.0 1.6 2 0 0 2 2 1 0 Helix-turn-helix domain OrfB_Zn_ribbon PF07282.11 gi|15922222|ref|NP_377891.1| - 0.053 13.4 1.5 0.15 12.0 1.5 1.7 1 0 0 1 1 1 0 Putative transposase DNA-binding domain GerE PF00196.19 gi|15922222|ref|NP_377891.1| - 0.079 12.5 0.0 0.15 11.6 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family DUF1804 PF08822.11 gi|15922222|ref|NP_377891.1| - 0.08 12.9 0.1 0.48 10.4 0.2 1.9 1 1 1 2 2 2 0 Protein of unknown function (DUF1804) Zn_Tnp_IS1595 PF12760.7 gi|15922222|ref|NP_377891.1| - 0.083 12.9 5.8 0.16 11.9 5.8 1.5 1 0 0 1 1 1 0 Transposase zinc-ribbon domain SAC3_GANP PF03399.16 gi|15922222|ref|NP_377891.1| - 0.13 11.6 0.2 14 4.9 0.1 2.1 2 0 0 2 2 2 0 SAC3/GANP family Zn-ribbon_8 PF09723.10 gi|15922222|ref|NP_377891.1| - 0.25 11.5 4.8 1.5 9.0 0.7 2.5 2 0 0 2 2 2 0 Zinc ribbon domain TF_Zn_Ribbon PF08271.12 gi|15922222|ref|NP_377891.1| - 0.37 10.3 2.6 0.83 9.2 2.6 1.6 1 0 0 1 1 1 0 TFIIB zinc-binding zinc_ribbon_4 PF13717.6 gi|15922222|ref|NP_377891.1| - 0.41 10.6 2.4 1.1 9.3 2.4 1.8 1 0 0 1 1 1 0 zinc-ribbon domain Nudix_N_2 PF14803.6 gi|15922222|ref|NP_377891.1| - 0.73 9.8 6.5 1.5 8.8 6.5 1.5 1 0 0 1 1 1 0 Nudix N-terminal Lar_restr_allev PF14354.6 gi|15922222|ref|NP_377891.1| - 1.2 9.6 5.8 0.3 11.5 1.5 2.1 2 0 0 2 2 2 0 Restriction alleviation protein Lar zf-Mss51 PF13824.6 gi|15922222|ref|NP_377891.1| - 3.7 7.7 5.5 8.1 6.6 5.3 1.7 1 1 0 1 1 1 0 Zinc-finger of mitochondrial splicing suppressor 51 Transposase_20 PF02371.16 gi|15922223|ref|NP_377892.1| - 6.6e-27 93.7 0.0 1.3e-26 92.7 0.0 1.5 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family DEDD_Tnp_IS110 PF01548.17 gi|15922223|ref|NP_377892.1| - 4.6e-16 59.1 0.0 8.3e-16 58.2 0.0 1.4 1 0 0 1 1 1 1 Transposase PhoH PF02562.16 gi|15922224|ref|NP_377893.1| - 2.9e-50 170.6 0.1 3.9e-50 170.2 0.1 1.2 1 0 0 1 1 1 1 PhoH-like protein KH_2 PF07650.17 gi|15922224|ref|NP_377893.1| - 8.4e-10 38.3 5.1 5.1e-08 32.6 5.1 2.5 1 1 0 1 1 1 1 KH domain KH_5 PF13184.6 gi|15922224|ref|NP_377893.1| - 6.3e-09 35.8 2.1 5.9e-06 26.3 0.0 3.3 3 0 0 3 3 3 2 NusA-like KH domain AAA_19 PF13245.6 gi|15922224|ref|NP_377893.1| - 0.00012 22.5 0.2 0.00045 20.6 0.2 1.9 1 1 0 1 1 1 1 AAA domain AAA_22 PF13401.6 gi|15922224|ref|NP_377893.1| - 0.00017 21.9 0.2 0.00041 20.6 0.2 1.6 1 1 0 1 1 1 1 AAA domain ResIII PF04851.15 gi|15922224|ref|NP_377893.1| - 0.00034 20.7 0.0 0.00072 19.6 0.0 1.5 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit IstB_IS21 PF01695.17 gi|15922224|ref|NP_377893.1| - 0.0013 18.5 0.0 0.0026 17.5 0.0 1.4 1 0 0 1 1 1 1 IstB-like ATP binding protein AAA_30 PF13604.6 gi|15922224|ref|NP_377893.1| - 0.002 17.9 0.0 0.0048 16.6 0.0 1.6 1 1 0 1 1 1 1 AAA domain DEAD PF00270.29 gi|15922224|ref|NP_377893.1| - 0.0038 17.0 0.1 0.0076 16.0 0.1 1.6 1 0 0 1 1 1 1 DEAD/DEAH box helicase RecA PF00154.21 gi|15922224|ref|NP_377893.1| - 0.024 14.1 0.1 0.071 12.6 0.1 1.7 1 1 1 2 2 2 0 recA bacterial DNA recombination protein ATPase_2 PF01637.18 gi|15922224|ref|NP_377893.1| - 0.033 14.1 1.3 0.097 12.6 1.3 1.8 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_25 PF13481.6 gi|15922224|ref|NP_377893.1| - 0.053 13.1 0.0 0.12 11.9 0.0 1.6 1 0 0 1 1 1 0 AAA domain NB-ARC PF00931.22 gi|15922224|ref|NP_377893.1| - 0.081 12.1 0.0 0.11 11.7 0.0 1.3 1 0 0 1 1 1 0 NB-ARC domain KH_1 PF00013.29 gi|15922224|ref|NP_377893.1| - 0.089 12.6 3.1 0.35 10.7 0.6 2.7 2 1 0 2 2 2 0 KH domain AAA_16 PF13191.6 gi|15922224|ref|NP_377893.1| - 0.1 13.0 0.0 0.24 11.7 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain AAA_14 PF13173.6 gi|15922224|ref|NP_377893.1| - 0.32 11.0 2.5 4.6 7.3 1.5 2.7 2 1 0 2 2 1 0 AAA domain AAA PF00004.29 gi|15922224|ref|NP_377893.1| - 1 9.8 5.6 22 5.5 5.6 2.5 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) Exo_endo_phos PF03372.23 gi|15922225|ref|NP_377894.1| - 1.8e-14 53.8 0.0 2.5e-14 53.4 0.0 1.2 1 0 0 1 1 1 1 Endonuclease/Exonuclease/phosphatase family Exo_endo_phos_2 PF14529.6 gi|15922225|ref|NP_377894.1| - 1e-07 31.8 0.0 2.3e-07 30.7 0.0 1.6 1 1 0 1 1 1 1 Endonuclease-reverse transcriptase SpoIIM PF01944.17 gi|15922226|ref|NP_377895.1| - 3.9e-13 49.7 20.4 6e-13 49.1 18.5 2.0 2 0 0 2 2 2 1 Stage II sporulation protein M DUF2730 PF10805.8 gi|15922226|ref|NP_377895.1| - 0.17 12.0 0.1 0.39 10.8 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2730) TPR_8 PF13181.6 gi|15922226|ref|NP_377895.1| - 0.37 11.1 2.3 11 6.5 0.1 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat Helicase_RecD PF05127.14 gi|15922227|ref|NP_377896.1| - 7.7e-45 152.9 0.0 1.2e-44 152.3 0.0 1.3 1 0 0 1 1 1 1 Helicase GNAT_acetyltr_2 PF13718.6 gi|15922227|ref|NP_377896.1| - 5.8e-30 104.4 0.0 7.8e-21 74.5 0.0 2.3 1 1 1 2 2 2 2 GNAT acetyltransferase 2 DUF1726 PF08351.11 gi|15922227|ref|NP_377896.1| - 2.2e-21 75.6 0.0 1.1e-20 73.3 0.0 2.1 2 0 0 2 2 2 1 Domain of unknown function (DUF1726) AAA_22 PF13401.6 gi|15922227|ref|NP_377896.1| - 2.5e-07 31.0 0.0 3.3e-06 27.4 0.0 2.5 1 1 1 2 2 2 1 AAA domain Acetyltransf_7 PF13508.7 gi|15922227|ref|NP_377896.1| - 9.5e-06 26.0 0.0 3.4e-05 24.2 0.0 2.0 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain tRNA_bind_2 PF13725.6 gi|15922227|ref|NP_377896.1| - 2.4e-05 24.2 0.0 3.6e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 Possible tRNA binding domain Acetyltransf_1 PF00583.25 gi|15922227|ref|NP_377896.1| - 3.8e-05 23.9 0.1 0.00019 21.7 0.0 2.2 2 0 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|15922227|ref|NP_377896.1| - 0.017 15.0 0.0 0.036 14.0 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain AAA_30 PF13604.6 gi|15922227|ref|NP_377896.1| - 0.045 13.5 0.0 0.16 11.7 0.0 1.9 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|15922227|ref|NP_377896.1| - 0.096 13.1 0.0 1.7 9.0 0.0 2.3 2 0 0 2 2 2 0 AAA ATPase domain AAA_19 PF13245.6 gi|15922227|ref|NP_377896.1| - 0.099 13.0 0.0 0.47 10.8 0.0 2.2 2 0 0 2 2 2 0 AAA domain DUF2469 PF10611.9 gi|15922227|ref|NP_377896.1| - 0.12 13.0 0.4 0.4 11.3 0.2 2.1 2 1 0 2 2 1 0 Protein of unknown function (DUF2469) GlutR_dimer PF00745.20 gi|15922227|ref|NP_377896.1| - 0.18 12.3 0.0 2.7 8.5 0.0 2.4 2 0 0 2 2 2 0 Glutamyl-tRNAGlu reductase, dimerisation domain NPCBM_assoc PF10633.9 gi|15922228|ref|NP_377897.1| - 7.2e-17 61.4 8.3 0.00044 20.4 0.0 7.0 6 3 0 6 6 6 4 NPCBM-associated, NEW3 domain of alpha-galactosidase CARDB PF07705.11 gi|15922228|ref|NP_377897.1| - 1.7e-08 34.6 19.2 0.00046 20.4 0.9 5.1 5 0 0 5 5 5 3 CARDB TRAP_beta PF05753.14 gi|15922228|ref|NP_377897.1| - 4.7e-05 22.8 16.4 2.5 7.5 0.1 6.3 5 1 0 5 5 5 2 Translocon-associated protein beta (TRAPB) DUF4832 PF16116.5 gi|15922228|ref|NP_377897.1| - 0.0039 17.1 0.0 2.9 7.7 0.0 2.6 2 0 0 2 2 2 2 Domain of unknown function (DUF4832) RAMP PF04901.13 gi|15922228|ref|NP_377897.1| - 0.033 14.2 4.2 0.14 12.2 0.3 3.1 3 0 0 3 3 3 0 Receptor activity modifying family DUF1344 PF07076.11 gi|15922228|ref|NP_377897.1| - 0.077 12.9 2.0 2.2 8.2 0.1 3.6 3 0 0 3 3 3 0 Protein of unknown function (DUF1344) Stevor PF17410.2 gi|15922228|ref|NP_377897.1| - 0.18 11.4 1.6 0.27 10.7 1.6 1.3 1 0 0 1 1 1 0 Subtelomeric Variable Open Reading frame DUF11 PF01345.18 gi|15922228|ref|NP_377897.1| - 0.59 10.5 14.4 3.1 8.2 1.2 6.1 5 3 0 5 5 5 0 Domain of unknown function DUF11 FtsX PF02687.21 gi|15922228|ref|NP_377897.1| - 0.61 10.6 8.0 0.12 12.9 2.4 2.6 2 0 0 2 2 2 0 FtsX-like permease family RIFIN PF02009.16 gi|15922228|ref|NP_377897.1| - 1.1 9.0 5.0 1.7 8.5 5.0 1.2 1 0 0 1 1 1 0 Rifin MMPL PF03176.15 gi|15922229|ref|NP_377898.1| - 2.9e-51 174.4 34.0 2.1e-28 99.2 9.0 2.8 2 1 1 3 3 3 2 MMPL family POTRA_2 PF08479.11 gi|15922229|ref|NP_377898.1| - 0.0067 16.2 1.3 1.8 8.4 0.1 3.4 2 1 1 3 3 3 2 POTRA domain, ShlB-type SBP_bac_1 PF01547.25 gi|15922230|ref|NP_377899.1| - 1.3e-06 28.6 0.1 1.7e-06 28.2 0.1 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 gi|15922230|ref|NP_377899.1| - 3.2e-05 23.9 0.1 4.1e-05 23.5 0.1 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein Glyco_tranf_2_4 PF13704.6 gi|15922230|ref|NP_377899.1| - 0.078 13.5 0.0 0.2 12.2 0.0 1.8 1 0 0 1 1 1 0 Glycosyl transferase family 2 DUF4330 PF14221.6 gi|15922230|ref|NP_377899.1| - 0.19 11.9 0.6 0.37 11.0 0.6 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4330) DUF2749 PF10907.8 gi|15922230|ref|NP_377899.1| - 3.2 8.0 6.0 6.1 7.1 6.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2749) DUF772 PF05598.11 gi|15922231|ref|NP_377900.1| - 2.6e-08 33.8 0.1 7.6e-08 32.3 0.1 1.8 1 1 0 1 1 1 1 Transposase domain (DUF772) DDE_Tnp_1 PF01609.21 gi|15922231|ref|NP_377900.1| - 0.013 15.1 0.0 0.029 14.0 0.0 1.6 1 1 0 1 1 1 0 Transposase DDE domain ABC_tran PF00005.27 gi|15922232|ref|NP_377901.1| - 5.4e-20 72.3 0.0 9.2e-20 71.6 0.0 1.4 1 0 0 1 1 1 1 ABC transporter TOBE_2 PF08402.10 gi|15922232|ref|NP_377901.1| - 2.1e-05 24.6 0.0 4.7e-05 23.5 0.0 1.6 1 0 0 1 1 1 1 TOBE domain AAA_21 PF13304.6 gi|15922232|ref|NP_377901.1| - 0.0014 18.5 0.0 0.002 18.0 0.0 1.3 1 0 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system BPD_transp_1 PF00528.22 gi|15922233|ref|NP_377902.1| - 8.4e-18 64.8 47.2 8.9e-11 41.9 22.1 4.1 2 2 2 4 4 4 2 Binding-protein-dependent transport system inner membrane component Chitin_synth_2 PF03142.15 gi|15922233|ref|NP_377902.1| - 1.9 7.0 8.1 3.9 6.0 8.1 1.5 1 0 0 1 1 1 0 Chitin synthase AAA_14 PF13173.6 gi|15922234|ref|NP_377903.1| - 4.7e-29 101.1 0.0 1.4e-28 99.5 0.0 1.9 1 0 0 1 1 1 1 AAA domain DUF4143 PF13635.6 gi|15922234|ref|NP_377903.1| - 2.3e-10 40.7 0.2 4.6e-10 39.7 0.2 1.5 1 0 0 1 1 1 1 Domain of unknown function (DUF4143) AAA_18 PF13238.6 gi|15922234|ref|NP_377903.1| - 0.014 15.9 0.0 0.3 11.6 0.0 2.4 2 1 0 2 2 2 0 AAA domain HTH_17 PF12728.7 gi|15922234|ref|NP_377903.1| - 0.037 14.2 0.1 0.57 10.4 0.0 2.9 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_DeoR PF08220.12 gi|15922234|ref|NP_377903.1| - 0.039 13.7 0.2 0.12 12.1 0.0 1.9 2 0 0 2 2 2 0 DeoR-like helix-turn-helix domain HTH_28 PF13518.6 gi|15922234|ref|NP_377903.1| - 0.089 12.9 0.0 0.18 12.0 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain Phage_terminase PF10668.9 gi|15922234|ref|NP_377903.1| - 0.12 12.3 0.1 0.29 11.2 0.1 1.6 1 0 0 1 1 1 0 Phage terminase small subunit DUF746 PF05344.11 gi|15922234|ref|NP_377903.1| - 0.16 11.8 0.0 0.31 10.9 0.0 1.4 1 0 0 1 1 1 0 Domain of Unknown Function (DUF746) HTH_36 PF13730.6 gi|15922234|ref|NP_377903.1| - 0.23 11.4 1.3 1.1 9.3 0.1 2.6 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_25 PF13413.6 gi|15922234|ref|NP_377903.1| - 0.68 9.8 2.5 2.5 8.0 0.2 2.5 2 1 0 2 2 2 0 Helix-turn-helix domain CcdA PF07362.12 gi|15922235|ref|NP_377904.1| - 2e-06 28.1 2.9 2.3e-06 27.9 2.4 1.5 1 1 0 1 1 1 1 Post-segregation antitoxin CcdA HEPN_AbiU2 PF18734.1 gi|15922235|ref|NP_377904.1| - 0.017 14.7 1.6 0.017 14.6 1.6 1.0 1 0 0 1 1 1 0 AbiU2 DUF2433 PF10360.9 gi|15922235|ref|NP_377904.1| - 0.062 13.4 0.2 0.069 13.2 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2433) VWA_3 PF13768.6 gi|15922235|ref|NP_377904.1| - 0.16 11.9 0.1 0.17 11.8 0.1 1.0 1 0 0 1 1 1 0 von Willebrand factor type A domain DNAPolymera_Pol PF11590.8 gi|15922235|ref|NP_377904.1| - 0.63 10.0 4.2 1.6 8.7 4.2 1.8 1 1 0 1 1 1 0 DNA polymerase catalytic subunit Pol Apolipoprotein PF01442.18 gi|15922236|ref|NP_377905.1| - 6.7e-06 26.1 34.5 7.7e-05 22.6 17.9 1.9 1 1 1 2 2 2 2 Apolipoprotein A1/A4/E domain DUF4375 PF14300.6 gi|15922236|ref|NP_377905.1| - 0.013 15.7 13.7 0.019 15.2 3.4 3.5 1 1 2 3 3 3 0 Domain of unknown function (DUF4375) NERD PF08378.11 gi|15922236|ref|NP_377905.1| - 0.014 15.8 0.5 0.055 13.9 0.2 2.1 1 1 1 2 2 2 0 Nuclease-related domain FliT PF05400.13 gi|15922236|ref|NP_377905.1| - 0.024 15.4 24.7 0.092 13.6 1.7 4.3 1 1 1 2 2 1 0 Flagellar protein FliT DUF3725 PF12523.8 gi|15922236|ref|NP_377905.1| - 0.054 13.8 11.6 2 8.8 0.3 4.7 1 1 4 5 5 5 0 Protein of unknown function (DUF3725) Gp58 PF07902.11 gi|15922236|ref|NP_377905.1| - 0.08 11.2 15.4 0.065 11.5 2.6 2.2 1 1 1 2 2 2 0 gp58-like protein VitK2_biosynth PF02621.14 gi|15922236|ref|NP_377905.1| - 0.4 10.2 4.4 0.23 10.9 0.9 2.2 1 1 1 2 2 2 0 Menaquinone biosynthesis Toxin_trans PF07952.12 gi|15922236|ref|NP_377905.1| - 0.46 9.5 20.4 0.52 9.3 5.2 3.6 1 1 3 4 4 4 0 Clostridium neurotoxin, Translocation domain DBINO PF13892.6 gi|15922236|ref|NP_377905.1| - 0.86 10.0 29.3 2.5 8.5 8.7 2.6 2 1 1 3 3 2 0 DNA-binding domain MucBP PF06458.12 gi|15922236|ref|NP_377905.1| - 1.4 9.9 5.2 72 4.5 2.9 3.5 2 1 0 2 2 2 0 MucBP domain DUF3417 PF11897.8 gi|15922236|ref|NP_377905.1| - 3.8 8.0 5.5 5.8 7.4 0.5 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF3417) FAM195 PF14799.6 gi|15922236|ref|NP_377905.1| - 3.9 7.9 7.1 13 6.2 3.8 2.9 1 1 1 2 2 2 0 FAM195 family ZnuA PF01297.17 gi|15922236|ref|NP_377905.1| - 4.3 6.7 15.7 1.6 8.0 0.8 3.3 1 1 1 3 3 3 0 Zinc-uptake complex component A periplasmic LMBR1 PF04791.16 gi|15922236|ref|NP_377905.1| - 6.2 5.6 12.0 9.6 5.0 12.0 1.4 1 0 0 1 1 1 0 LMBR1-like membrane protein AAA_21 PF13304.6 gi|15922237|ref|NP_377906.1| - 1.3e-21 77.7 5.7 1.9e-12 47.6 0.1 2.9 2 1 1 3 3 3 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|15922237|ref|NP_377906.1| - 1.7e-18 67.5 11.7 6e-14 52.5 0.2 3.2 2 1 1 3 3 3 2 AAA ATPase domain AAA_23 PF13476.6 gi|15922237|ref|NP_377906.1| - 1.6e-08 35.3 0.5 1.6e-08 35.3 0.5 2.0 2 0 0 2 2 2 1 AAA domain DUF2813 PF11398.8 gi|15922237|ref|NP_377906.1| - 2.2e-07 30.5 0.0 1.9e-05 24.1 0.0 2.2 2 0 0 2 2 2 1 Protein of unknown function (DUF2813) SMC_N PF02463.19 gi|15922237|ref|NP_377906.1| - 3.1e-07 30.0 0.1 7.7e-05 22.2 0.0 2.7 3 0 0 3 3 3 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|15922237|ref|NP_377906.1| - 4.5e-05 23.1 0.0 0.00013 21.7 0.0 1.7 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_13 PF13166.6 gi|15922237|ref|NP_377906.1| - 0.0051 15.5 2.9 0.017 13.8 0.2 2.4 2 1 0 2 2 2 1 AAA domain ABC_tran PF00005.27 gi|15922237|ref|NP_377906.1| - 0.0059 17.1 0.0 0.014 15.9 0.0 1.6 1 0 0 1 1 1 1 ABC transporter AAA_27 PF13514.6 gi|15922237|ref|NP_377906.1| - 0.01 15.5 0.0 0.019 14.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain MMR_HSR1 PF01926.23 gi|15922237|ref|NP_377906.1| - 0.02 15.0 0.2 1.4 9.0 0.0 2.8 2 1 0 2 2 2 0 50S ribosome-binding GTPase SpoVAE PF14097.6 gi|15922237|ref|NP_377906.1| - 0.071 12.8 0.3 0.5 10.0 0.1 2.1 2 0 0 2 2 2 0 Stage V sporulation protein AE1 DUF3215 PF11503.8 gi|15922237|ref|NP_377906.1| - 0.082 12.8 0.2 5.6 6.9 0.1 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3215) Gtr1_RagA PF04670.12 gi|15922238|ref|NP_377907.1| - 0.014 14.8 1.2 0.34 10.2 0.2 2.5 1 1 0 2 2 2 0 Gtr1/RagA G protein conserved region Rick_17kDa_Anti PF05433.15 gi|15922239|ref|NP_377908.1| - 0.078 12.9 4.0 0.16 11.8 4.0 1.6 1 1 0 1 1 1 0 Glycine zipper 2TM domain DsbD_2 PF13386.6 gi|15922239|ref|NP_377908.1| - 0.14 12.1 0.1 0.18 11.7 0.1 1.1 1 0 0 1 1 1 0 Cytochrome C biogenesis protein transmembrane region PT-VENN PF04829.13 gi|15922239|ref|NP_377908.1| - 2.1 8.5 6.0 0.35 11.0 0.4 2.1 1 1 1 2 2 2 0 Pre-toxin domain with VENN motif FAS_N PF17828.1 gi|15922240|ref|NP_377909.1| - 0.021 14.8 1.2 0.05 13.6 0.1 2.0 2 1 1 3 3 3 0 N-terminal domain in fatty acid synthase subunit beta Glycos_transf_1 PF00534.20 gi|15922241|ref|NP_377910.1| - 1e-15 57.7 0.0 2.5e-15 56.4 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|15922241|ref|NP_377910.1| - 8.7e-13 48.9 0.0 5.4e-12 46.3 0.0 2.0 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|15922241|ref|NP_377910.1| - 6.6e-07 29.6 0.0 1.9e-06 28.2 0.0 1.7 1 1 1 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|15922241|ref|NP_377910.1| - 2.3e-05 24.4 0.0 4e-05 23.7 0.0 1.4 1 1 0 1 1 1 1 Glycosyltransferase Family 4 DDE_Tnp_2 PF04693.12 gi|15922244|ref|NP_377913.1| - 8.1e-30 104.2 0.5 9.6e-30 103.9 0.5 1.1 1 0 0 1 1 1 1 Archaeal putative transposase ISC1217 DDE_Tnp_1 PF01609.21 gi|15922244|ref|NP_377913.1| - 1e-05 25.3 0.2 1.5e-05 24.7 0.2 1.2 1 0 0 1 1 1 1 Transposase DDE domain PIN PF01850.21 gi|15922248|ref|NP_377917.1| - 9.2e-06 26.2 1.0 1.5e-05 25.5 1.0 1.3 1 0 0 1 1 1 1 PIN domain DUF5615 PF18480.1 gi|15922248|ref|NP_377917.1| - 0.0044 16.7 0.1 0.017 14.8 0.0 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF5615) PIN PF01850.21 gi|15922249|ref|NP_377918.1| - 3.5e-08 34.0 0.7 5.1e-08 33.4 0.7 1.3 1 0 0 1 1 1 1 PIN domain 5_3_exonuc_N PF02739.16 gi|15922249|ref|NP_377918.1| - 0.042 13.8 2.8 0.099 12.5 2.8 1.6 1 1 0 1 1 1 0 5'-3' exonuclease, N-terminal resolvase-like domain Chalcone_3 PF16036.5 gi|15922249|ref|NP_377918.1| - 0.051 13.7 0.1 0.081 13.0 0.1 1.5 1 1 0 1 1 1 0 Chalcone isomerase-like PIN_4 PF13638.6 gi|15922249|ref|NP_377918.1| - 0.13 12.5 1.6 0.19 12.0 1.6 1.3 1 1 0 1 1 1 0 PIN domain OrfB_Zn_ribbon PF07282.11 gi|15922254|ref|NP_377923.1| - 0.16 12.0 0.0 1.1 9.3 0.0 2.3 2 0 0 2 2 2 0 Putative transposase DNA-binding domain Resolvase PF00239.21 gi|15922255|ref|NP_377924.1| - 7.9e-25 87.7 0.4 1e-24 87.3 0.4 1.1 1 0 0 1 1 1 1 Resolvase, N terminal domain HTH_17 PF12728.7 gi|15922255|ref|NP_377924.1| - 1.5e-15 57.1 1.7 1.1e-14 54.4 0.1 2.6 3 0 0 3 3 3 1 Helix-turn-helix domain DUF1323 PF07037.11 gi|15922255|ref|NP_377924.1| - 0.0012 19.2 0.1 0.0035 17.7 0.1 2.0 1 1 0 1 1 1 1 Putative transcription regulator (DUF1323) MerR PF00376.23 gi|15922255|ref|NP_377924.1| - 0.0045 16.7 0.0 0.0096 15.7 0.0 1.6 1 0 0 1 1 1 1 MerR family regulatory protein TFIID_20kDa PF03847.13 gi|15922255|ref|NP_377924.1| - 0.017 15.6 0.3 0.043 14.3 0.1 1.8 2 0 0 2 2 1 0 Transcription initiation factor TFIID subunit A CLP1_P PF16575.5 gi|15922255|ref|NP_377924.1| - 0.027 14.3 0.0 0.036 13.9 0.0 1.3 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop NYN PF01936.18 gi|15922255|ref|NP_377924.1| - 0.04 14.4 0.1 0.067 13.7 0.1 1.3 1 0 0 1 1 1 0 NYN domain HTH_29 PF13551.6 gi|15922255|ref|NP_377924.1| - 0.066 13.3 0.1 0.32 11.0 0.0 2.3 3 0 0 3 3 3 0 Winged helix-turn helix MerR_1 PF13411.6 gi|15922255|ref|NP_377924.1| - 0.08 13.0 0.0 0.2 11.8 0.0 1.8 1 0 0 1 1 1 0 MerR HTH family regulatory protein B12-binding PF02310.19 gi|15922255|ref|NP_377924.1| - 0.11 12.5 0.0 0.29 11.2 0.0 1.7 1 1 1 2 2 2 0 B12 binding domain CBFD_NFYB_HMF PF00808.23 gi|15922255|ref|NP_377924.1| - 0.14 12.5 0.1 0.3 11.4 0.1 1.6 1 0 0 1 1 1 0 Histone-like transcription factor (CBF/NF-Y) and archaeal histone DUF4276 PF14103.6 gi|15922256|ref|NP_377925.1| - 3.9e-05 23.9 0.1 5.3e-05 23.5 0.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4276) GshA PF08886.11 gi|15922256|ref|NP_377925.1| - 0.02 13.5 0.1 0.024 13.2 0.1 1.1 1 0 0 1 1 1 0 Glutamate-cysteine ligase AAA_21 PF13304.6 gi|15922257|ref|NP_377926.1| - 2.3e-23 83.5 0.3 2.6e-14 53.7 0.2 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|15922257|ref|NP_377926.1| - 7.9e-21 75.2 0.6 1.7e-12 47.7 0.0 2.3 2 0 0 2 2 2 2 AAA ATPase domain SMC_N PF02463.19 gi|15922257|ref|NP_377926.1| - 4.3e-14 52.5 0.1 4.9e-09 35.9 0.1 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|15922257|ref|NP_377926.1| - 2.8e-08 34.5 0.3 6.4e-08 33.3 0.0 1.7 2 1 0 2 2 2 1 AAA domain AAA_29 PF13555.6 gi|15922257|ref|NP_377926.1| - 7.3e-05 22.4 0.0 0.00017 21.3 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain DUF2813 PF11398.8 gi|15922257|ref|NP_377926.1| - 0.00047 19.5 0.5 0.66 9.2 0.1 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF2813) ABC_tran PF00005.27 gi|15922257|ref|NP_377926.1| - 0.0057 17.2 0.0 0.074 13.6 0.0 2.2 2 0 0 2 2 2 1 ABC transporter AAA_22 PF13401.6 gi|15922257|ref|NP_377926.1| - 0.011 16.0 0.0 0.57 10.4 0.0 2.3 2 0 0 2 2 2 0 AAA domain AAA_27 PF13514.6 gi|15922257|ref|NP_377926.1| - 0.11 12.0 0.0 0.2 11.2 0.0 1.4 1 0 0 1 1 1 0 AAA domain DUF4322 PF14210.6 gi|15922258|ref|NP_377927.1| - 3.2e-43 145.5 0.5 8.1e-43 144.2 0.1 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4322) DDE_Tnp_1 PF01609.21 gi|15922258|ref|NP_377927.1| - 5.9e-08 32.6 0.4 1.1e-07 31.8 0.4 1.4 1 0 0 1 1 1 1 Transposase DDE domain DDE_5 PF13546.6 gi|15922258|ref|NP_377927.1| - 0.028 13.8 0.0 0.72 9.1 0.0 2.1 2 0 0 2 2 2 0 DDE superfamily endonuclease VAPB_antitox PF02697.14 gi|15922259|ref|NP_377928.1| - 3.5e-22 78.9 1.7 4.1e-22 78.7 1.7 1.0 1 0 0 1 1 1 1 Putative antitoxin SeqA_N PF17206.3 gi|15922259|ref|NP_377928.1| - 0.0025 17.1 0.5 0.0034 16.6 0.5 1.3 1 0 0 1 1 1 1 SeqA protein N-terminal domain Lipoprotein_11 PF03260.13 gi|15922259|ref|NP_377928.1| - 0.023 14.1 0.0 0.026 13.9 0.0 1.2 1 0 0 1 1 1 0 Lepidopteran low molecular weight (30 kD) lipoprotein ATG101 PF07855.12 gi|15922259|ref|NP_377928.1| - 0.065 13.2 0.2 0.068 13.1 0.2 1.0 1 0 0 1 1 1 0 Autophagy-related protein 101 PIN PF01850.21 gi|15922260|ref|NP_377929.1| - 4.4e-15 56.3 0.1 4.8e-15 56.1 0.1 1.0 1 0 0 1 1 1 1 PIN domain DUF5615 PF18480.1 gi|15922260|ref|NP_377929.1| - 0.022 14.5 0.0 0.032 14.0 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF5615) HTH_17 PF12728.7 gi|15922261|ref|NP_377930.1| - 2e-14 53.5 0.1 4.4e-14 52.4 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain Peptidase_M48 PF01435.18 gi|15922261|ref|NP_377930.1| - 7.9e-08 32.3 0.1 9.8e-08 32.0 0.1 1.3 1 0 0 1 1 1 1 Peptidase family M48 HTH_23 PF13384.6 gi|15922261|ref|NP_377930.1| - 0.00022 20.9 0.0 0.00055 19.7 0.0 1.6 1 0 0 1 1 1 1 Homeodomain-like domain MerR PF00376.23 gi|15922261|ref|NP_377930.1| - 0.00023 20.8 0.0 0.00045 19.9 0.0 1.5 1 0 0 1 1 1 1 MerR family regulatory protein MerR_1 PF13411.6 gi|15922261|ref|NP_377930.1| - 0.0011 19.0 0.0 0.0031 17.6 0.0 1.9 1 1 0 1 1 1 1 MerR HTH family regulatory protein HTH_29 PF13551.6 gi|15922261|ref|NP_377930.1| - 0.0017 18.4 0.0 0.0041 17.1 0.0 1.7 1 0 0 1 1 1 1 Winged helix-turn helix Peptidase_U49 PF10463.9 gi|15922261|ref|NP_377930.1| - 0.0054 16.5 3.6 1.1 9.0 0.0 3.0 3 0 0 3 3 3 2 Peptidase U49 Peptidase_M78 PF06114.13 gi|15922261|ref|NP_377930.1| - 0.022 14.7 1.1 0.06 13.3 0.4 2.2 2 1 0 2 2 2 0 IrrE N-terminal-like domain HTH_28 PF13518.6 gi|15922261|ref|NP_377930.1| - 0.041 14.0 0.0 0.12 12.5 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain Peptidase_M2 PF01401.18 gi|15922261|ref|NP_377930.1| - 0.067 11.8 0.1 0.12 10.9 0.1 1.4 1 0 0 1 1 1 0 Angiotensin-converting enzyme DUF45 PF01863.17 gi|15922261|ref|NP_377930.1| - 0.15 12.1 1.5 0.51 10.3 1.5 1.9 1 1 0 1 1 1 0 Protein of unknown function DUF45 HTH_3 PF01381.22 gi|15922261|ref|NP_377930.1| - 0.21 11.7 1.1 0.8 9.8 0.0 2.6 3 0 0 3 3 3 0 Helix-turn-helix XLF PF09302.11 gi|15922262|ref|NP_377931.1| - 0.074 13.2 0.8 0.48 10.6 0.2 2.2 2 0 0 2 2 2 0 XLF-Cernunnos, XRcc4-like factor, NHEJ component SKA1 PF07160.12 gi|15922263|ref|NP_377932.1| - 0.072 12.9 1.2 0.13 12.1 1.2 1.3 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 1 DUF2207 PF09972.9 gi|15922264|ref|NP_377933.1| - 0.0004 19.3 1.2 0.0004 19.3 1.2 1.8 1 1 1 2 2 2 1 Predicted membrane protein (DUF2207) HALZ PF02183.18 gi|15922264|ref|NP_377933.1| - 0.0006 20.0 3.7 0.0015 18.7 3.7 1.7 1 0 0 1 1 1 1 Homeobox associated leucine zipper BLOC1_2 PF10046.9 gi|15922264|ref|NP_377933.1| - 0.0011 19.3 0.5 0.0011 19.3 0.5 2.6 3 0 0 3 3 2 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF4201 PF13870.6 gi|15922264|ref|NP_377933.1| - 0.0022 17.7 0.5 0.0022 17.7 0.5 1.9 2 0 0 2 2 2 1 Domain of unknown function (DUF4201) DivIC PF04977.15 gi|15922264|ref|NP_377933.1| - 0.0035 17.1 1.3 0.0035 17.1 1.3 2.4 3 0 0 3 3 3 1 Septum formation initiator PG_binding_4 PF12229.8 gi|15922264|ref|NP_377933.1| - 0.0037 17.5 2.8 0.64 10.3 0.1 2.4 2 0 0 2 2 2 1 Putative peptidoglycan binding domain APG6_N PF17675.1 gi|15922264|ref|NP_377933.1| - 0.0038 17.8 0.1 0.0038 17.8 0.1 2.2 2 0 0 2 2 2 1 Apg6 coiled-coil region Baculo_PEP_C PF04513.12 gi|15922264|ref|NP_377933.1| - 0.0084 16.2 0.7 0.022 14.8 0.7 1.6 1 0 0 1 1 1 1 Baculovirus polyhedron envelope protein, PEP, C terminus Seryl_tRNA_N PF02403.22 gi|15922264|ref|NP_377933.1| - 0.011 16.0 0.3 0.011 16.0 0.3 2.1 2 0 0 2 2 2 0 Seryl-tRNA synthetase N-terminal domain GP41 PF00517.17 gi|15922264|ref|NP_377933.1| - 0.012 15.5 0.5 0.022 14.6 0.5 1.4 1 0 0 1 1 1 0 Retroviral envelope protein Prefoldin PF02996.17 gi|15922264|ref|NP_377933.1| - 0.013 15.4 2.9 0.023 14.6 0.9 2.4 2 0 0 2 2 2 0 Prefoldin subunit Snapin_Pallidin PF14712.6 gi|15922264|ref|NP_377933.1| - 0.015 15.7 0.7 0.048 14.1 0.7 1.8 1 0 0 1 1 1 0 Snapin/Pallidin BRE1 PF08647.11 gi|15922264|ref|NP_377933.1| - 0.021 14.9 2.9 0.047 13.7 0.3 2.4 2 0 0 2 2 2 0 BRE1 E3 ubiquitin ligase Goodbye PF17109.5 gi|15922264|ref|NP_377933.1| - 0.033 14.6 2.3 0.089 13.2 0.0 2.7 3 1 1 4 4 3 0 fungal STAND N-terminal Goodbye domain NPV_P10 PF05531.12 gi|15922264|ref|NP_377933.1| - 0.053 14.0 1.3 0.15 12.6 1.2 1.8 1 1 0 1 1 1 0 Nucleopolyhedrovirus P10 protein DUF4200 PF13863.6 gi|15922264|ref|NP_377933.1| - 0.055 13.9 1.2 0.055 13.9 1.2 2.9 3 0 0 3 3 2 0 Domain of unknown function (DUF4200) SGL PF08450.12 gi|15922264|ref|NP_377933.1| - 0.069 12.7 0.0 0.12 11.9 0.0 1.3 1 0 0 1 1 1 0 SMP-30/Gluconolactonase/LRE-like region DUF3450 PF11932.8 gi|15922264|ref|NP_377933.1| - 0.073 12.4 0.4 0.43 9.8 0.0 2.0 2 0 0 2 2 2 0 Protein of unknown function (DUF3450) DUF948 PF06103.11 gi|15922264|ref|NP_377933.1| - 0.074 13.3 0.1 0.39 11.0 0.0 2.1 2 0 0 2 2 2 0 Bacterial protein of unknown function (DUF948) DASH_Dad3 PF08656.10 gi|15922264|ref|NP_377933.1| - 0.081 13.0 0.8 0.63 10.2 0.4 2.3 2 0 0 2 2 2 0 DASH complex subunit Dad3 Prefoldin_2 PF01920.20 gi|15922264|ref|NP_377933.1| - 0.099 12.6 0.3 0.099 12.6 0.3 2.5 2 0 0 2 2 2 0 Prefoldin subunit CREPT PF16566.5 gi|15922264|ref|NP_377933.1| - 0.11 12.7 0.4 0.11 12.7 0.4 2.2 2 0 0 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour DUF1640 PF07798.11 gi|15922264|ref|NP_377933.1| - 0.12 12.4 3.0 0.092 12.8 0.7 1.9 1 1 0 2 2 2 0 Protein of unknown function (DUF1640) TMF_TATA_bd PF12325.8 gi|15922264|ref|NP_377933.1| - 0.15 12.3 1.9 0.15 12.3 0.1 1.9 2 0 0 2 2 2 0 TATA element modulatory factor 1 TATA binding OmpH PF03938.14 gi|15922264|ref|NP_377933.1| - 0.17 12.2 0.1 0.17 12.2 0.1 2.4 2 0 0 2 2 2 0 Outer membrane protein (OmpH-like) Laminin_II PF06009.12 gi|15922264|ref|NP_377933.1| - 0.19 11.7 1.5 0.29 11.2 0.4 1.8 2 0 0 2 2 2 0 Laminin Domain II TMF_DNA_bd PF12329.8 gi|15922264|ref|NP_377933.1| - 0.44 10.6 7.6 0.068 13.2 1.5 2.3 2 0 0 2 2 2 0 TATA element modulatory factor 1 DNA binding Cep57_MT_bd PF06657.13 gi|15922264|ref|NP_377933.1| - 6.1 7.4 6.7 1 9.9 0.1 3.0 4 0 0 4 4 3 0 Centrosome microtubule-binding domain of Cep57 DDE_Tnp_2 PF04693.12 gi|15922266|ref|NP_377935.1| - 8.3e-54 183.0 0.2 1e-53 182.7 0.2 1.1 1 0 0 1 1 1 1 Archaeal putative transposase ISC1217 DDE_Tnp_1 PF01609.21 gi|15922266|ref|NP_377935.1| - 2.1e-07 30.8 0.0 2.5e-07 30.6 0.0 1.1 1 0 0 1 1 1 1 Transposase DDE domain DDE_Tnp_2 PF04693.12 gi|15922267|ref|NP_377936.1| - 7.5e-58 196.3 0.7 8.8e-58 196.1 0.7 1.0 1 0 0 1 1 1 1 Archaeal putative transposase ISC1217 HTH_20 PF12840.7 gi|15922267|ref|NP_377936.1| - 0.005 16.9 0.0 0.009 16.1 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain ATP-synt_E_2 PF08112.11 gi|15922267|ref|NP_377936.1| - 0.013 15.8 0.5 0.22 11.8 0.1 2.2 2 0 0 2 2 2 0 ATP synthase epsilon subunit TrmB PF01978.19 gi|15922267|ref|NP_377936.1| - 0.013 15.4 0.0 0.02 14.8 0.0 1.4 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB HTH_45 PF14947.6 gi|15922267|ref|NP_377936.1| - 0.017 15.1 0.1 0.032 14.2 0.1 1.5 1 0 0 1 1 1 0 Winged helix-turn-helix Tim44 PF04280.15 gi|15922267|ref|NP_377936.1| - 0.026 14.6 0.1 0.032 14.3 0.1 1.1 1 0 0 1 1 1 0 Tim44-like domain DUF659 PF04937.15 gi|15922267|ref|NP_377936.1| - 0.038 13.9 0.8 0.11 12.4 0.1 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF 659) HTH_27 PF13463.6 gi|15922267|ref|NP_377936.1| - 0.051 14.1 0.2 0.11 13.0 0.1 1.7 2 0 0 2 2 2 0 Winged helix DNA-binding domain B-block_TFIIIC PF04182.12 gi|15922267|ref|NP_377936.1| - 0.11 12.7 0.0 0.14 12.4 0.0 1.3 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC Polysacc_synt PF01943.17 gi|15922268|ref|NP_377937.1| - 1.4e-06 27.9 31.4 1.4e-06 27.9 31.4 2.3 1 1 1 2 2 2 1 Polysaccharide biosynthesis protein Polysacc_synt_C PF14667.6 gi|15922268|ref|NP_377937.1| - 0.001 19.2 15.7 0.001 19.2 15.7 4.3 2 2 2 4 4 4 2 Polysaccharide biosynthesis C-terminal domain DDE_Tnp_2 PF04693.12 gi|15922269|ref|NP_377938.1| - 6e-174 577.9 2.2 7e-174 577.6 2.2 1.0 1 0 0 1 1 1 1 Archaeal putative transposase ISC1217 DDE_Tnp_1 PF01609.21 gi|15922269|ref|NP_377938.1| - 4e-06 26.6 0.0 7.8e-06 25.7 0.0 1.6 1 1 0 1 1 1 1 Transposase DDE domain HTH_20 PF12840.7 gi|15922269|ref|NP_377938.1| - 0.033 14.3 0.0 0.06 13.4 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_45 PF14947.6 gi|15922269|ref|NP_377938.1| - 0.042 13.8 0.7 0.19 11.7 0.1 2.2 2 0 0 2 2 2 0 Winged helix-turn-helix TrmB PF01978.19 gi|15922269|ref|NP_377938.1| - 0.053 13.4 0.0 0.15 11.9 0.0 1.8 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB N6-adenineMlase PF10237.9 gi|15922270|ref|NP_377939.1| - 0.035 13.9 0.0 0.048 13.5 0.0 1.2 1 0 0 1 1 1 0 Probable N6-adenine methyltransferase DUF2431 PF10354.9 gi|15922270|ref|NP_377939.1| - 0.12 12.7 0.0 0.12 12.6 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF2431) Methyltransf_18 PF12847.7 gi|15922271|ref|NP_377940.1| - 0.054 13.4 0.0 0.058 13.3 0.0 1.1 1 0 0 1 1 1 0 Methyltransferase domain MethyltransfD12 PF02086.15 gi|15922271|ref|NP_377940.1| - 0.097 12.3 0.0 0.11 12.1 0.0 1.0 1 0 0 1 1 1 0 D12 class N6 adenine-specific DNA methyltransferase MTS PF05175.14 gi|15922271|ref|NP_377940.1| - 0.13 11.8 0.0 0.15 11.6 0.0 1.2 1 0 0 1 1 1 0 Methyltransferase small domain Carbam_trans_C PF16861.5 gi|15922272|ref|NP_377941.1| - 5.6e-58 195.3 0.0 9.2e-58 194.6 0.0 1.3 1 0 0 1 1 1 1 Carbamoyltransferase C-terminus Carbam_trans_N PF02543.15 gi|15922272|ref|NP_377941.1| - 1.2e-38 133.7 0.2 1.8e-38 133.1 0.2 1.2 1 0 0 1 1 1 1 Carbamoyltransferase N-terminus Sua5_yciO_yrdC PF01300.18 gi|15922272|ref|NP_377941.1| - 0.13 11.7 0.0 0.95 8.9 0.0 2.0 2 0 0 2 2 2 0 Telomere recombination Peptidase_M22 PF00814.25 gi|15922272|ref|NP_377941.1| - 0.15 11.7 0.0 0.3 10.7 0.0 1.4 1 0 0 1 1 1 0 Glycoprotease family DDE_Tnp_1 PF01609.21 gi|15922273|ref|NP_377942.1| - 1.2e-11 44.6 0.4 5.2e-11 42.6 0.1 2.0 1 1 1 2 2 2 1 Transposase DDE domain Aminoglyc_resit PF10706.9 gi|15922273|ref|NP_377942.1| - 0.0062 16.3 0.0 0.011 15.5 0.0 1.3 1 0 0 1 1 1 1 Aminoglycoside-2''-adenylyltransferase Carbam_trans_N PF02543.15 gi|15922274|ref|NP_377943.1| - 3.7e-10 40.0 0.0 4.1e-10 39.8 0.0 1.0 1 0 0 1 1 1 1 Carbamoyltransferase N-terminus Glycos_transf_2 PF00535.26 gi|15922277|ref|NP_377946.1| - 2.8e-13 50.0 0.3 2.8e-13 50.0 0.3 1.6 2 0 0 2 2 2 1 Glycosyl transferase family 2 Glycos_transf_2 PF00535.26 gi|15922278|ref|NP_377947.1| - 2.2e-11 43.9 0.4 4e-11 43.0 0.4 1.5 1 1 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|15922278|ref|NP_377947.1| - 3.4e-06 27.1 0.0 1.1e-05 25.5 0.0 1.8 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_transf_25 PF01755.17 gi|15922278|ref|NP_377947.1| - 0.00052 19.9 0.8 0.0012 18.7 0.8 1.6 1 0 0 1 1 1 1 Glycosyltransferase family 25 (LPS biosynthesis protein) Dysbindin PF04440.16 gi|15922278|ref|NP_377947.1| - 0.19 11.9 0.0 0.33 11.1 0.0 1.3 1 0 0 1 1 1 0 Dysbindin (Dystrobrevin binding protein 1) Glycos_transf_1 PF00534.20 gi|15922280|ref|NP_377949.1| - 1.7e-24 86.3 0.1 2.6e-24 85.7 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|15922280|ref|NP_377949.1| - 6.8e-16 58.9 0.0 9.8e-16 58.4 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|15922280|ref|NP_377949.1| - 4e-05 23.9 0.0 7.2e-05 23.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Ribosom_S30AE_C PF16321.5 gi|15922280|ref|NP_377949.1| - 0.026 14.2 1.3 0.091 12.5 0.1 2.7 2 0 0 2 2 2 0 Sigma 54 modulation/S30EA ribosomal protein C terminus DUF2811 PF10929.8 gi|15922280|ref|NP_377949.1| - 0.14 12.5 0.0 0.29 11.4 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF2811) Methyltransf_21 PF05050.12 gi|15922281|ref|NP_377950.1| - 1.2e-12 48.2 0.0 1.7e-12 47.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase FkbM domain Met_10 PF02475.16 gi|15922281|ref|NP_377950.1| - 2.6e-05 24.1 0.1 4e-05 23.4 0.1 1.5 1 1 0 1 1 1 1 Met-10+ like-protein PrmA PF06325.13 gi|15922281|ref|NP_377950.1| - 0.0018 17.7 0.1 0.0026 17.2 0.1 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Methyltransf_18 PF12847.7 gi|15922281|ref|NP_377950.1| - 0.002 18.1 0.2 1.9 8.4 0.1 2.2 2 0 0 2 2 2 2 Methyltransferase domain PCMT PF01135.19 gi|15922281|ref|NP_377950.1| - 0.014 15.2 0.0 0.021 14.6 0.0 1.2 1 0 0 1 1 1 0 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_31 PF13847.6 gi|15922281|ref|NP_377950.1| - 0.15 11.8 0.4 0.9 9.3 0.2 2.0 2 0 0 2 2 2 0 Methyltransferase domain Glycos_transf_2 PF00535.26 gi|15922282|ref|NP_377951.1| - 3e-14 53.2 0.6 5.5e-14 52.3 0.6 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|15922282|ref|NP_377951.1| - 7.7e-08 32.5 0.0 9.4e-08 32.2 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|15922282|ref|NP_377951.1| - 6.8e-05 22.5 3.4 6.8e-05 22.5 3.4 2.2 2 1 1 3 3 3 1 Glycosyltransferase like family 2 CRM1_repeat_2 PF18784.1 gi|15922282|ref|NP_377951.1| - 0.025 14.2 0.8 0.12 12.1 0.1 2.4 2 0 0 2 2 2 0 CRM1 / Exportin repeat 2 RalF_SCD PF18248.1 gi|15922282|ref|NP_377951.1| - 0.078 12.9 0.3 3.7 7.5 0.0 2.6 1 1 1 2 2 2 0 RalF C-terminal Sec-7 capping domain Glycos_transf_1 PF00534.20 gi|15922283|ref|NP_377952.1| - 1e-14 54.4 0.0 2.2e-14 53.3 0.0 1.6 1 1 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|15922283|ref|NP_377952.1| - 1.9e-10 41.3 0.0 2.9e-10 40.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 PrmA PF06325.13 gi|15922284|ref|NP_377953.1| - 3.1e-08 33.4 0.2 4.6e-08 32.8 0.2 1.2 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) Met_10 PF02475.16 gi|15922284|ref|NP_377953.1| - 5.7e-07 29.5 0.6 1.4e-06 28.3 0.4 1.5 2 1 0 2 2 2 1 Met-10+ like-protein Methyltransf_18 PF12847.7 gi|15922284|ref|NP_377953.1| - 3.4e-06 27.1 0.2 0.01 15.8 0.0 2.4 2 0 0 2 2 2 2 Methyltransferase domain MTS PF05175.14 gi|15922284|ref|NP_377953.1| - 7.4e-06 25.6 0.0 1.2e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 gi|15922284|ref|NP_377953.1| - 9.9e-06 26.2 0.0 1.9e-05 25.3 0.0 1.5 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|15922284|ref|NP_377953.1| - 1.2e-05 25.2 0.0 2.1e-05 24.4 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain PCMT PF01135.19 gi|15922284|ref|NP_377953.1| - 1.2e-05 25.2 0.1 1.9e-05 24.5 0.1 1.2 1 0 0 1 1 1 1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) Methyltransf_15 PF09445.10 gi|15922284|ref|NP_377953.1| - 1.7e-05 24.5 0.1 0.0012 18.5 0.1 2.2 2 0 0 2 2 2 1 RNA cap guanine-N2 methyltransferase Cons_hypoth95 PF03602.15 gi|15922284|ref|NP_377953.1| - 0.00011 22.0 0.0 0.00015 21.4 0.0 1.2 1 0 0 1 1 1 1 Conserved hypothetical protein 95 Methyltransf_23 PF13489.6 gi|15922284|ref|NP_377953.1| - 0.00011 22.1 0.0 0.00014 21.7 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 gi|15922284|ref|NP_377953.1| - 0.00036 20.0 0.0 0.035 13.5 0.1 2.2 2 0 0 2 2 2 1 Tellurite resistance protein TehB Methyltrans_SAM PF10672.9 gi|15922284|ref|NP_377953.1| - 0.0009 18.5 0.0 0.0013 18.0 0.0 1.2 1 0 0 1 1 1 1 S-adenosylmethionine-dependent methyltransferase RrnaAD PF00398.20 gi|15922284|ref|NP_377953.1| - 0.0011 18.1 0.0 0.0017 17.5 0.0 1.2 1 0 0 1 1 1 1 Ribosomal RNA adenine dimethylase Methyltransf_11 PF08241.12 gi|15922284|ref|NP_377953.1| - 0.0015 19.1 0.0 0.0029 18.2 0.0 1.6 1 1 0 1 1 1 1 Methyltransferase domain Methyltr_RsmB-F PF01189.17 gi|15922284|ref|NP_377953.1| - 0.0015 18.2 0.0 0.0024 17.5 0.0 1.2 1 0 0 1 1 1 1 16S rRNA methyltransferase RsmB/F GidB PF02527.15 gi|15922284|ref|NP_377953.1| - 0.01 15.2 0.0 0.016 14.6 0.0 1.2 1 0 0 1 1 1 0 rRNA small subunit methyltransferase G Methyltransf_4 PF02390.17 gi|15922284|ref|NP_377953.1| - 0.011 15.3 0.1 0.018 14.5 0.1 1.4 1 0 0 1 1 1 0 Putative methyltransferase Methyltransf_21 PF05050.12 gi|15922284|ref|NP_377953.1| - 0.016 15.2 0.3 0.21 11.6 0.0 2.2 1 1 1 2 2 2 0 Methyltransferase FkbM domain DREV PF05219.12 gi|15922284|ref|NP_377953.1| - 0.022 13.8 0.0 0.047 12.8 0.0 1.5 1 0 0 1 1 1 0 DREV methyltransferase Methyltransf_12 PF08242.12 gi|15922284|ref|NP_377953.1| - 0.029 15.1 0.0 0.049 14.4 0.0 1.4 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_16 PF10294.9 gi|15922284|ref|NP_377953.1| - 0.039 13.7 0.1 0.076 12.7 0.1 1.4 1 0 0 1 1 1 0 Lysine methyltransferase tRNA_U5-meth_tr PF05958.11 gi|15922284|ref|NP_377953.1| - 0.041 12.9 0.0 0.063 12.3 0.0 1.2 1 0 0 1 1 1 0 tRNA (Uracil-5-)-methyltransferase CMAS PF02353.20 gi|15922284|ref|NP_377953.1| - 0.051 12.9 0.9 0.22 10.8 0.1 2.0 2 0 0 2 2 2 0 Mycolic acid cyclopropane synthetase DUF938 PF06080.12 gi|15922284|ref|NP_377953.1| - 0.059 13.1 0.0 0.09 12.5 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF938) DNA_methylase PF00145.17 gi|15922284|ref|NP_377953.1| - 0.076 12.3 0.0 0.14 11.4 0.0 1.5 1 0 0 1 1 1 0 C-5 cytosine-specific DNA methylase DUF1798 PF08807.10 gi|15922284|ref|NP_377953.1| - 0.11 12.7 0.0 6.3 7.0 0.0 2.8 3 0 0 3 3 3 0 Bacterial domain of unknown function (DUF1798) Spermine_synth PF01564.17 gi|15922284|ref|NP_377953.1| - 0.12 11.8 0.2 0.21 11.0 0.2 1.4 1 0 0 1 1 1 0 Spermine/spermidine synthase domain Ubie_methyltran PF01209.18 gi|15922284|ref|NP_377953.1| - 0.12 11.6 0.1 0.19 11.0 0.1 1.2 1 0 0 1 1 1 0 ubiE/COQ5 methyltransferase family Glycos_transf_2 PF00535.26 gi|15922285|ref|NP_377954.1| - 1.2e-07 31.7 0.1 5.1e-07 29.7 0.0 2.0 1 1 1 2 2 2 1 Glycosyl transferase family 2 dTDP_sugar_isom PF00908.17 gi|15922286|ref|NP_377955.1| - 7.3e-58 195.0 0.0 8.9e-58 194.7 0.0 1.0 1 0 0 1 1 1 1 dTDP-4-dehydrorhamnose 3,5-epimerase RmlD_sub_bind PF04321.17 gi|15922287|ref|NP_377956.1| - 2.4e-58 197.5 0.0 2.8e-58 197.3 0.0 1.0 1 0 0 1 1 1 1 RmlD substrate binding domain Epimerase PF01370.21 gi|15922287|ref|NP_377956.1| - 9e-17 61.3 0.0 1.3e-16 60.8 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|15922287|ref|NP_377956.1| - 4.6e-11 42.7 0.0 7e-10 38.8 0.0 2.0 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase NAD_binding_4 PF07993.12 gi|15922287|ref|NP_377956.1| - 8.2e-08 31.7 0.0 8.7e-06 25.1 0.0 2.4 2 1 0 2 2 2 1 Male sterility protein Polysacc_synt_2 PF02719.15 gi|15922287|ref|NP_377956.1| - 8.7e-08 31.6 0.9 1.8e-05 24.0 0.9 2.8 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.19 gi|15922287|ref|NP_377956.1| - 0.0078 15.2 0.2 0.021 13.9 0.2 1.6 1 1 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Semialdhyde_dh PF01118.24 gi|15922287|ref|NP_377956.1| - 0.021 15.3 0.0 0.033 14.6 0.0 1.5 1 0 0 1 1 1 0 Semialdehyde dehydrogenase, NAD binding domain DFP PF04127.15 gi|15922287|ref|NP_377956.1| - 0.045 13.6 0.0 0.075 12.9 0.0 1.4 1 0 0 1 1 1 0 DNA / pantothenate metabolism flavoprotein NTP_transferase PF00483.23 gi|15922288|ref|NP_377957.1| - 9.4e-50 169.5 0.0 1.2e-49 169.2 0.0 1.1 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|15922288|ref|NP_377957.1| - 1.1e-10 42.1 0.0 1.5e-10 41.6 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep PF00132.24 gi|15922288|ref|NP_377957.1| - 0.00019 21.0 9.3 0.0076 15.9 1.4 5.0 2 1 1 3 3 3 1 Bacterial transferase hexapeptide (six repeats) Fucokinase PF07959.12 gi|15922288|ref|NP_377957.1| - 0.0049 15.9 0.2 0.011 14.7 0.1 1.5 1 1 0 1 1 1 1 L-fucokinase IspD PF01128.19 gi|15922288|ref|NP_377957.1| - 0.0075 16.0 0.1 0.014 15.2 0.1 1.5 1 1 0 1 1 1 1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DUF4954 PF16314.5 gi|15922288|ref|NP_377957.1| - 0.015 13.5 0.9 0.021 13.0 0.9 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4954) CTP_transf_3 PF02348.19 gi|15922288|ref|NP_377957.1| - 0.18 11.7 0.0 0.29 11.0 0.0 1.2 1 0 0 1 1 1 0 Cytidylyltransferase GDP_Man_Dehyd PF16363.5 gi|15922289|ref|NP_377958.1| - 1.5e-61 208.7 0.0 2e-61 208.3 0.0 1.1 1 0 0 1 1 1 1 GDP-mannose 4,6 dehydratase Epimerase PF01370.21 gi|15922289|ref|NP_377958.1| - 1.6e-58 198.0 0.0 2e-58 197.7 0.0 1.1 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family RmlD_sub_bind PF04321.17 gi|15922289|ref|NP_377958.1| - 1e-15 57.6 0.0 1.2e-15 57.4 0.0 1.2 1 0 0 1 1 1 1 RmlD substrate binding domain 3Beta_HSD PF01073.19 gi|15922289|ref|NP_377958.1| - 5.6e-15 55.1 0.0 7.3e-15 54.7 0.0 1.1 1 0 0 1 1 1 1 3-beta hydroxysteroid dehydrogenase/isomerase family Polysacc_synt_2 PF02719.15 gi|15922289|ref|NP_377958.1| - 5.4e-13 48.7 0.0 1.5e-12 47.3 0.0 1.7 1 1 0 1 1 1 1 Polysaccharide biosynthesis protein NAD_binding_4 PF07993.12 gi|15922289|ref|NP_377958.1| - 1.3e-09 37.6 2.4 1.7e-08 34.0 0.4 2.8 1 1 0 2 2 2 1 Male sterility protein NmrA PF05368.13 gi|15922289|ref|NP_377958.1| - 0.0016 18.0 0.1 0.075 12.6 0.0 2.3 2 0 0 2 2 2 1 NmrA-like family adh_short PF00106.25 gi|15922289|ref|NP_377958.1| - 0.002 17.6 0.3 0.85 9.0 0.1 2.3 2 1 0 2 2 2 2 short chain dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|15922289|ref|NP_377958.1| - 0.12 12.7 0.4 0.22 11.8 0.4 1.5 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain RAMPs PF03787.15 gi|15922292|ref|NP_377961.1| - 7.5e-28 98.0 1.9 1.8e-27 96.7 1.9 1.6 1 1 0 1 1 1 1 RAMP superfamily Cas_Cmr5 PF09701.10 gi|15922293|ref|NP_377962.1| - 0.00013 22.3 0.0 0.00021 21.6 0.0 1.3 1 1 0 1 1 1 1 CRISPR-associated protein (Cas_Cmr5) RAMPs PF03787.15 gi|15922294|ref|NP_377963.1| - 3.7e-20 72.9 9.5 7.9e-19 68.5 1.1 2.5 2 1 0 2 2 2 2 RAMP superfamily RAMPs PF03787.15 gi|15922295|ref|NP_377964.1| - 9.8e-11 42.1 1.5 6.2e-10 39.5 0.1 2.7 1 1 1 2 2 2 1 RAMP superfamily ABC_sub_bind PF04392.12 gi|15922295|ref|NP_377964.1| - 0.0047 16.2 0.2 0.0071 15.6 0.2 1.3 1 0 0 1 1 1 1 ABC transporter substrate binding protein DUF3692 PF12469.8 gi|15922296|ref|NP_377965.1| - 9.7e-25 86.9 0.0 3.8e-24 85.0 0.0 2.1 1 0 0 1 1 1 1 CRISPR-associated protein DUF1002 PF06207.11 gi|15922296|ref|NP_377965.1| - 0.8 9.2 4.2 1.8 8.1 4.2 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1002) Cas_Cmr3 PF09700.10 gi|15922297|ref|NP_377966.1| - 2.9e-15 56.6 0.0 5.1e-07 29.4 0.0 2.9 2 1 1 3 3 3 2 CRISPR-associated protein (Cas_Cmr3) DisA-linker PF10635.9 gi|15922297|ref|NP_377966.1| - 0.015 15.1 0.0 2.8 7.7 0.0 2.2 2 0 0 2 2 2 0 DisA bacterial checkpoint controller linker region Cas_Cas5d PF09704.10 gi|15922297|ref|NP_377966.1| - 0.13 12.2 0.0 0.2 11.5 0.0 1.2 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Cas5) DUF5325 PF17259.2 gi|15922297|ref|NP_377966.1| - 0.16 11.9 0.4 0.38 10.7 0.1 1.7 2 0 0 2 2 2 0 Family of unknown function (DUF5325) DDE_Tnp_IS240 PF13610.6 gi|15922298|ref|NP_377967.1| - 1.9e-06 28.2 0.5 2.7e-06 27.7 0.5 1.1 1 0 0 1 1 1 1 DDE domain DDE_Tnp_IS66 PF03050.14 gi|15922298|ref|NP_377967.1| - 0.0088 15.6 0.1 0.013 15.0 0.1 1.2 1 0 0 1 1 1 1 Transposase IS66 family DUF4580 PF15162.6 gi|15922298|ref|NP_377967.1| - 0.017 14.7 0.0 0.024 14.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4580) FTR PF01913.18 gi|15922298|ref|NP_377967.1| - 0.11 12.5 0.0 0.15 12.0 0.0 1.2 1 0 0 1 1 1 0 Formylmethanofuran-tetrahydromethanopterin formyltransferase HD PF01966.22 gi|15922299|ref|NP_377968.1| - 1.4e-11 44.7 0.4 3.3e-11 43.5 0.4 1.7 1 0 0 1 1 1 1 HD domain Epsilon_antitox PF08998.11 gi|15922299|ref|NP_377968.1| - 0.46 10.8 6.0 0.75 10.1 0.4 3.2 3 0 0 3 3 3 0 Bacterial epsilon antitoxin Lipoprotein_15 PF03640.15 gi|15922300|ref|NP_377969.1| - 0.15 11.6 0.2 0.3 10.7 0.2 1.6 1 1 0 1 1 1 0 Secreted repeat of unknown function NADH_oxidored PF08040.11 gi|15922301|ref|NP_377970.1| - 0.062 13.0 0.3 0.15 11.8 0.3 1.7 1 0 0 1 1 1 0 MNLL subunit DUF5643 PF18705.1 gi|15922301|ref|NP_377970.1| - 1.1 9.2 12.3 1.4 8.9 0.1 3.4 2 1 1 3 3 3 0 Family of unknown function (DUF5643) TPR_2 PF07719.17 gi|15922302|ref|NP_377971.1| - 1.5e-07 31.0 2.3 0.00095 19.1 0.0 4.7 5 0 0 5 5 5 1 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|15922302|ref|NP_377971.1| - 5.4e-07 29.7 5.6 7.4e-06 26.1 0.0 2.7 3 0 0 3 3 3 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_1 PF00515.28 gi|15922302|ref|NP_377971.1| - 3.4e-06 26.6 0.1 0.02 14.7 0.2 3.9 4 0 0 4 4 4 2 Tetratricopeptide repeat TPR_19 PF14559.6 gi|15922302|ref|NP_377971.1| - 6.9e-06 26.5 0.9 0.00016 22.1 0.0 2.4 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_11 PF13414.6 gi|15922302|ref|NP_377971.1| - 0.00027 20.6 0.5 0.2 11.4 0.0 3.0 1 1 1 2 2 2 2 TPR repeat TPR_12 PF13424.6 gi|15922302|ref|NP_377971.1| - 0.0041 17.4 0.2 3 8.2 0.0 3.3 2 1 1 3 3 3 2 Tetratricopeptide repeat Glyco_transf_41 PF13844.6 gi|15922302|ref|NP_377971.1| - 0.0093 14.5 0.1 0.011 14.2 0.1 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 41 TPR_6 PF13174.6 gi|15922302|ref|NP_377971.1| - 0.13 12.9 0.1 6.3 7.7 0.0 3.5 3 1 1 4 4 4 0 Tetratricopeptide repeat TPR_17 PF13431.6 gi|15922302|ref|NP_377971.1| - 0.51 10.8 4.0 3.1 8.4 0.0 3.5 3 1 1 4 4 4 0 Tetratricopeptide repeat DDE_Tnp_1 PF01609.21 gi|15922303|ref|NP_377972.1| - 0.0075 15.9 0.0 0.034 13.8 0.0 1.9 1 1 1 2 2 2 1 Transposase DDE domain PaREP1 PF05942.11 gi|15922304|ref|NP_377973.1| - 1.6e-06 28.0 0.6 2e-06 27.7 0.6 1.2 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family DUF273 PF03314.14 gi|15922304|ref|NP_377973.1| - 0.0029 17.2 0.2 0.0033 17.0 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function, DUF273 HEPN_RnaseLS PF18869.1 gi|15922304|ref|NP_377973.1| - 0.023 14.8 0.5 0.038 14.1 0.3 1.5 1 1 0 1 1 1 0 RnaseLS-like HEPN PHF5 PF03660.14 gi|15922305|ref|NP_377974.1| - 0.17 12.1 0.1 0.35 11.1 0.1 1.4 1 0 0 1 1 1 0 PHF5-like protein SapB_1 PF05184.15 gi|15922305|ref|NP_377974.1| - 0.38 10.8 4.0 3.6 7.7 0.2 3.2 2 0 0 2 2 2 0 Saposin-like type B, region 1 COPI_C PF06957.11 gi|15922307|ref|NP_377976.1| - 0.0088 14.8 0.0 0.0088 14.8 0.0 1.0 1 0 0 1 1 1 1 Coatomer (COPI) alpha subunit C-terminus RAMPs PF03787.15 gi|15922308|ref|NP_377977.1| - 0.00052 20.1 0.7 0.00097 19.2 0.6 1.5 1 1 0 1 1 1 1 RAMP superfamily RecR PF02132.15 gi|15922310|ref|NP_377979.1| - 0.04 13.5 1.9 2.4 7.8 0.2 2.4 2 0 0 2 2 2 0 RecR protein RAMPs PF03787.15 gi|15922310|ref|NP_377979.1| - 0.12 12.3 2.7 2.6 8.0 0.1 2.4 1 1 1 2 2 2 0 RAMP superfamily PABP PF00658.18 gi|15922310|ref|NP_377979.1| - 0.19 11.9 0.7 0.31 11.3 0.7 1.3 1 0 0 1 1 1 0 Poly-adenylate binding protein, unique domain Glyco_H_20C_C PF18088.1 gi|15922311|ref|NP_377980.1| - 0.028 14.3 0.0 0.045 13.6 0.0 1.2 1 0 0 1 1 1 0 Glycoside Hydrolase 20C C-terminal domain DUF5633 PF18656.1 gi|15922311|ref|NP_377980.1| - 0.48 10.3 2.3 3.4 7.6 0.1 2.5 2 0 0 2 2 2 0 Family of unknown function (DUF5633) Pkinase PF00069.25 gi|15922312|ref|NP_377981.1| - 3.4e-37 128.3 0.0 6.2e-37 127.4 0.0 1.4 1 0 0 1 1 1 1 Protein kinase domain Pkinase_Tyr PF07714.17 gi|15922312|ref|NP_377981.1| - 2.2e-16 59.9 0.0 1.6e-15 57.1 0.0 2.1 1 1 0 1 1 1 1 Protein tyrosine kinase TPR_11 PF13414.6 gi|15922312|ref|NP_377981.1| - 2.1e-08 33.7 11.9 1.4e-05 24.7 0.2 5.4 4 2 1 5 5 5 2 TPR repeat TPR_2 PF07719.17 gi|15922312|ref|NP_377981.1| - 1.1e-07 31.4 21.6 3.3e-06 26.8 0.1 6.8 8 0 0 8 8 8 1 Tetratricopeptide repeat ANAPC3 PF12895.7 gi|15922312|ref|NP_377981.1| - 3.9e-06 27.0 9.9 6.6e-05 23.1 0.1 4.1 2 2 1 4 4 4 1 Anaphase-promoting complex, cyclosome, subunit 3 TPR_1 PF00515.28 gi|15922312|ref|NP_377981.1| - 1.9e-05 24.3 16.8 0.00048 19.8 0.2 5.4 6 0 0 6 6 6 2 Tetratricopeptide repeat TPR_19 PF14559.6 gi|15922312|ref|NP_377981.1| - 5.7e-05 23.5 12.1 0.00015 22.2 0.2 4.4 4 1 1 5 5 4 1 Tetratricopeptide repeat Kinase-like PF14531.6 gi|15922312|ref|NP_377981.1| - 0.0046 16.3 0.0 0.1 11.9 0.0 2.4 2 0 0 2 2 2 1 Kinase-like TPR_8 PF13181.6 gi|15922312|ref|NP_377981.1| - 0.014 15.6 15.0 2.5 8.5 0.1 6.0 6 0 0 6 6 6 0 Tetratricopeptide repeat TPR_14 PF13428.6 gi|15922312|ref|NP_377981.1| - 0.024 15.4 2.9 0.81 10.7 0.0 4.3 3 1 2 5 5 4 0 Tetratricopeptide repeat TPR_12 PF13424.6 gi|15922312|ref|NP_377981.1| - 0.072 13.4 0.0 0.072 13.4 0.0 4.0 4 1 0 4 4 4 0 Tetratricopeptide repeat PPR_1 PF12854.7 gi|15922312|ref|NP_377981.1| - 0.078 12.7 0.6 23 4.8 0.1 3.6 3 0 0 3 3 3 0 PPR repeat TPR_6 PF13174.6 gi|15922312|ref|NP_377981.1| - 0.18 12.5 14.6 12 6.8 0.0 6.1 7 0 0 7 7 6 0 Tetratricopeptide repeat TPR_17 PF13431.6 gi|15922312|ref|NP_377981.1| - 0.48 10.9 13.9 0.57 10.7 0.1 5.2 6 0 0 6 6 5 0 Tetratricopeptide repeat HSDR_N_2 PF13588.6 gi|15922313|ref|NP_377982.1| - 2.3e-08 34.0 1.0 0.00021 21.3 0.1 2.4 2 0 0 2 2 2 2 Type I restriction enzyme R protein N terminus (HSDR_N) Rick_17kDa_Anti PF05433.15 gi|15922314|ref|NP_377983.1| - 3.7e-11 42.7 5.3 5e-11 42.3 5.3 1.2 1 0 0 1 1 1 1 Glycine zipper 2TM domain Gly-zipper_Omp PF13488.6 gi|15922314|ref|NP_377983.1| - 7.7e-08 32.2 5.9 1.2e-07 31.6 5.9 1.3 1 0 0 1 1 1 1 Glycine zipper Gly-zipper_YMGG PF13441.6 gi|15922314|ref|NP_377983.1| - 1.8e-07 30.8 4.2 2.8e-07 30.2 4.2 1.2 1 0 0 1 1 1 1 YMGG-like Gly-zipper TraT PF05818.12 gi|15922314|ref|NP_377983.1| - 8.4e-05 22.4 0.1 0.00012 21.9 0.1 1.2 1 0 0 1 1 1 1 Enterobacterial TraT complement resistance protein Gly-zipper_OmpA PF13436.6 gi|15922314|ref|NP_377983.1| - 0.00043 20.0 6.0 0.0011 18.7 6.1 1.6 1 1 0 1 1 1 1 Glycine-zipper domain Romo1 PF10247.9 gi|15922314|ref|NP_377983.1| - 0.0065 16.8 1.9 2 8.9 0.4 2.2 2 0 0 2 2 2 2 Reactive mitochondrial oxygen species modulator 1 MscL PF01741.18 gi|15922314|ref|NP_377983.1| - 0.016 15.5 1.1 1.8 8.9 0.1 2.2 2 0 0 2 2 2 0 Large-conductance mechanosensitive channel, MscL PT-VENN PF04829.13 gi|15922314|ref|NP_377983.1| - 0.024 14.7 2.8 0.57 10.3 0.2 2.2 2 0 0 2 2 2 0 Pre-toxin domain with VENN motif DUF456 PF04306.13 gi|15922314|ref|NP_377983.1| - 0.073 13.4 0.4 0.11 12.8 0.4 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF456) Phage_TAC_13 PF16459.5 gi|15922314|ref|NP_377983.1| - 0.1 13.1 0.0 0.14 12.6 0.0 1.4 1 1 0 1 1 1 0 Phage tail assembly chaperone, TAC DUF1269 PF06897.12 gi|15922314|ref|NP_377983.1| - 0.14 12.4 5.7 2.2 8.6 0.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF1269) DUF2273 PF10031.9 gi|15922314|ref|NP_377983.1| - 2.5 8.2 10.0 4.6 7.3 2.4 2.3 2 0 0 2 2 2 0 Small integral membrane protein (DUF2273) Bacteriocin_IIc PF10439.9 gi|15922314|ref|NP_377983.1| - 4.1 7.6 9.0 25 5.1 9.0 2.0 1 1 0 1 1 1 0 Bacteriocin class II with double-glycine leader peptide MazE_antitoxin PF04014.18 gi|15922315|ref|NP_377984.1| - 4.4e-12 45.6 1.2 7.1e-12 45.0 1.2 1.4 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin TOBE PF03459.17 gi|15922315|ref|NP_377984.1| - 0.028 14.7 0.0 0.89 9.9 0.0 2.1 2 0 0 2 2 2 0 TOBE domain TrkA_C PF02080.21 gi|15922315|ref|NP_377984.1| - 0.046 13.6 0.8 0.096 12.5 0.5 1.7 2 1 0 2 2 2 0 TrkA-C domain DUF104 PF01954.16 gi|15922315|ref|NP_377984.1| - 0.084 13.3 1.5 0.12 12.8 1.5 1.5 1 1 0 1 1 1 0 Protein of unknown function DUF104 Methyltrans_RNA PF04452.14 gi|15922315|ref|NP_377984.1| - 0.15 11.4 0.0 0.18 11.1 0.0 1.1 1 0 0 1 1 1 0 RNA methyltransferase DDE_Tnp_2 PF04693.12 gi|15922316|ref|NP_377985.1| - 2.4e-28 99.4 4.3 1.2e-16 60.9 0.1 2.1 1 1 0 2 2 2 2 Archaeal putative transposase ISC1217 Lipocalin_3 PF12702.7 gi|15922316|ref|NP_377985.1| - 0.02 15.0 0.4 0.048 13.7 0.0 1.8 2 0 0 2 2 2 0 Lipocalin-like DDE_Tnp_2 PF04693.12 gi|15922317|ref|NP_377986.1| - 5.6e-24 85.0 3.7 1.3e-11 44.3 0.0 2.1 1 1 1 2 2 2 2 Archaeal putative transposase ISC1217 AAA_14 PF13173.6 gi|15922318|ref|NP_377987.1| - 5.5e-31 107.3 1.1 8.3e-31 106.7 0.3 1.7 2 0 0 2 2 2 1 AAA domain DUF4143 PF13635.6 gi|15922318|ref|NP_377987.1| - 4.8e-07 30.0 0.3 1.7e-06 28.2 0.3 1.8 1 1 0 1 1 1 1 Domain of unknown function (DUF4143) T2SSE PF00437.20 gi|15922318|ref|NP_377987.1| - 0.0053 15.9 0.0 0.0079 15.3 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_24 PF13479.6 gi|15922318|ref|NP_377987.1| - 0.022 14.5 0.1 0.038 13.7 0.1 1.4 1 0 0 1 1 1 0 AAA domain ATPase_2 PF01637.18 gi|15922318|ref|NP_377987.1| - 0.038 13.9 5.8 0.32 10.9 2.1 3.4 2 2 2 4 4 4 0 ATPase domain predominantly from Archaea AAA_16 PF13191.6 gi|15922318|ref|NP_377987.1| - 0.087 13.2 0.0 11 6.4 0.0 2.6 2 1 1 3 3 3 0 AAA ATPase domain AAA_28 PF13521.6 gi|15922318|ref|NP_377987.1| - 0.19 12.0 0.4 1.1 9.5 0.0 2.3 2 0 0 2 2 2 0 AAA domain Gram_pos_anchor PF00746.21 gi|15922320|ref|NP_377989.1| - 0.096 12.6 0.1 0.096 12.6 0.1 2.6 3 0 0 3 3 3 0 LPXTG cell wall anchor motif DUF2070 PF09843.9 gi|15922320|ref|NP_377989.1| - 9.8 4.3 12.9 11 4.1 12.9 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) PaREP1 PF05942.11 gi|15922321|ref|NP_377990.1| - 5.8e-37 126.1 2.8 9e-37 125.5 2.8 1.3 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family Telomere_reg-2 PF10193.9 gi|15922321|ref|NP_377990.1| - 0.0023 18.3 0.9 0.014 15.8 0.4 2.2 2 0 0 2 2 2 1 Telomere length regulation protein DUF357 PF04010.13 gi|15922321|ref|NP_377990.1| - 0.049 13.7 0.4 0.24 11.5 0.2 2.4 3 1 0 3 3 3 0 Protein of unknown function (DUF357) Hydantoinase_B PF02538.14 gi|15922321|ref|NP_377990.1| - 0.15 10.5 0.0 0.22 9.9 0.0 1.3 1 1 0 1 1 1 0 Hydantoinase B/oxoprolinase PIN PF01850.21 gi|15922322|ref|NP_377991.1| - 3.9e-15 56.4 1.9 4.6e-15 56.2 1.9 1.1 1 0 0 1 1 1 1 PIN domain DUF3800 PF12686.7 gi|15922324|ref|NP_377993.1| - 1.5e-09 38.6 2.2 2.7e-08 34.4 2.2 2.2 1 1 0 1 1 1 1 Protein of unknown function (DUF3800) DDE_Tnp_1_assoc PF13808.6 gi|15922324|ref|NP_377993.1| - 0.055 13.5 0.0 0.14 12.2 0.0 1.7 1 0 0 1 1 1 0 DDE_Tnp_1-associated OrfB_Zn_ribbon PF07282.11 gi|15922326|ref|NP_377995.1| - 7.2e-23 80.3 1.4 4.2e-22 77.8 0.3 2.4 2 0 0 2 2 2 1 Putative transposase DNA-binding domain zinc_ribbon_2 PF13240.6 gi|15922326|ref|NP_377995.1| - 0.0027 17.4 4.4 0.0078 15.9 4.6 1.7 1 1 1 2 2 2 2 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|15922326|ref|NP_377995.1| - 0.0077 15.6 2.2 1.4 8.5 0.3 2.3 2 0 0 2 2 2 2 zinc-ribbon domain DZR PF12773.7 gi|15922326|ref|NP_377995.1| - 0.012 15.6 0.8 0.02 14.9 0.8 1.3 1 0 0 1 1 1 0 Double zinc ribbon LytTR PF04397.15 gi|15922326|ref|NP_377995.1| - 0.017 15.3 0.3 0.054 13.7 0.3 1.8 1 0 0 1 1 1 0 LytTr DNA-binding domain HypA PF01155.19 gi|15922326|ref|NP_377995.1| - 0.018 15.1 1.0 0.051 13.6 1.0 1.9 1 1 0 1 1 1 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA OrfB_IS605 PF01385.19 gi|15922326|ref|NP_377995.1| - 0.031 14.5 0.7 0.061 13.5 0.7 1.5 1 0 0 1 1 1 0 Probable transposase CpXC PF14353.6 gi|15922326|ref|NP_377995.1| - 0.093 12.8 0.5 22 5.1 0.0 2.5 1 1 0 2 2 2 0 CpXC protein zf-HYPF PF07503.12 gi|15922326|ref|NP_377995.1| - 0.12 12.2 1.9 2.5 8.0 0.1 2.6 2 0 0 2 2 2 0 HypF finger C1_2 PF03107.16 gi|15922326|ref|NP_377995.1| - 0.13 12.6 1.3 0.24 11.8 1.3 1.4 1 0 0 1 1 1 0 C1 domain Ribosomal_L32p PF01783.23 gi|15922326|ref|NP_377995.1| - 0.15 12.4 1.1 0.74 10.1 1.1 2.2 2 1 0 2 2 1 0 Ribosomal L32p protein family Sgf11 PF08209.11 gi|15922326|ref|NP_377995.1| - 0.18 11.4 2.8 5.4 6.7 0.1 2.3 1 1 1 2 2 2 0 Sgf11 (transcriptional regulation protein) NRDD PF13597.6 gi|15922326|ref|NP_377995.1| - 0.19 10.5 0.6 0.63 8.8 0.2 1.8 2 0 0 2 2 2 0 Anaerobic ribonucleoside-triphosphate reductase zf-NADH-PPase PF09297.11 gi|15922326|ref|NP_377995.1| - 0.26 11.0 1.0 1 9.1 1.0 1.9 1 1 0 1 1 1 0 NADH pyrophosphatase zinc ribbon domain zf_C2H2_10 PF18414.1 gi|15922326|ref|NP_377995.1| - 0.35 10.4 6.3 6 6.5 1.0 2.4 2 0 0 2 2 2 0 C2H2 type zinc-finger DUF1610 PF07754.11 gi|15922326|ref|NP_377995.1| - 0.49 10.4 6.2 3 7.9 0.9 2.6 2 0 0 2 2 2 0 Domain of unknown function (DUF1610) zf-IS66 PF13005.7 gi|15922326|ref|NP_377995.1| - 1 9.8 3.9 1.4 9.4 0.2 2.6 1 1 1 2 2 2 0 zinc-finger binding domain of transposase IS66 CxC7 PF18866.1 gi|15922326|ref|NP_377995.1| - 1.1 9.4 4.3 16 5.7 0.3 3.1 2 1 1 3 3 3 0 CxC7 like cysteine cluster associated with KDZ transposases YhfH PF14149.6 gi|15922326|ref|NP_377995.1| - 1.2 9.1 5.4 3.5 7.7 3.7 2.5 2 1 1 3 3 3 0 YhfH-like protein Zn_Tnp_IS1595 PF12760.7 gi|15922326|ref|NP_377995.1| - 1.7 8.7 4.7 9.2 6.3 4.9 2.1 1 1 1 2 2 2 0 Transposase zinc-ribbon domain AAA_21 PF13304.6 gi|15922327|ref|NP_377996.1| - 2.8e-34 119.3 7.1 5.7e-34 118.3 7.1 1.5 1 1 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|15922327|ref|NP_377996.1| - 2.6e-23 83.4 14.2 1.8e-15 57.5 6.5 2.2 2 0 0 2 2 2 2 AAA ATPase domain SMC_N PF02463.19 gi|15922327|ref|NP_377996.1| - 1e-18 67.6 0.0 2.1e-18 66.6 0.0 1.5 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|15922327|ref|NP_377996.1| - 3.2e-11 44.1 2.3 9.9e-11 42.5 2.3 1.8 1 1 0 1 1 1 1 AAA domain AAA_29 PF13555.6 gi|15922327|ref|NP_377996.1| - 2e-05 24.3 0.0 4.6e-05 23.1 0.0 1.6 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_13 PF13166.6 gi|15922327|ref|NP_377996.1| - 0.0023 16.6 1.1 0.0026 16.5 0.0 1.5 2 0 0 2 2 2 1 AAA domain DUF2813 PF11398.8 gi|15922327|ref|NP_377996.1| - 0.0036 16.6 0.2 1.7 7.8 0.1 2.4 2 1 0 2 2 2 2 Protein of unknown function (DUF2813) AAA_22 PF13401.6 gi|15922327|ref|NP_377996.1| - 0.0044 17.3 0.1 3.8 7.8 0.1 2.5 2 1 0 2 2 2 2 AAA domain AAA_27 PF13514.6 gi|15922327|ref|NP_377996.1| - 0.0054 16.3 0.0 0.0093 15.6 0.0 1.3 1 0 0 1 1 1 1 AAA domain ABC_tran PF00005.27 gi|15922327|ref|NP_377996.1| - 0.0091 16.5 0.3 0.037 14.6 0.0 2.0 2 1 0 2 2 2 1 ABC transporter PLA2_B PF01735.18 gi|15922328|ref|NP_377997.1| - 0.22 9.9 0.0 0.22 9.9 0.0 1.1 1 0 0 1 1 1 0 Lysophospholipase catalytic domain Myb_DNA-bind_7 PF15963.5 gi|15922329|ref|NP_377998.1| - 0.011 15.6 0.7 0.012 15.5 0.7 1.2 1 0 0 1 1 1 0 Myb DNA-binding like NUFIP1 PF10453.9 gi|15922329|ref|NP_377998.1| - 0.32 10.9 5.2 2.8 7.8 0.7 2.3 1 1 1 2 2 2 0 Nuclear fragile X mental retardation-interacting protein 1 (NUFIP1) PIN PF01850.21 gi|15922330|ref|NP_377999.1| - 2e-05 25.1 0.7 2.5e-05 24.7 0.7 1.1 1 0 0 1 1 1 1 PIN domain MoCF_biosynth PF00994.24 gi|15922330|ref|NP_377999.1| - 0.068 12.8 0.0 0.12 12.0 0.0 1.5 2 0 0 2 2 2 0 Probable molybdopterin binding domain AAA_14 PF13173.6 gi|15922332|ref|NP_378001.1| - 2.2e-06 27.7 0.0 4.3e-06 26.8 0.0 1.4 1 0 0 1 1 1 1 AAA domain Viral_helicase1 PF01443.18 gi|15922332|ref|NP_378001.1| - 0.0044 16.8 0.0 0.007 16.1 0.0 1.2 1 0 0 1 1 1 1 Viral (Superfamily 1) RNA helicase ATPase_2 PF01637.18 gi|15922332|ref|NP_378001.1| - 0.011 15.6 3.6 0.2 11.5 0.1 3.3 2 1 1 3 3 3 0 ATPase domain predominantly from Archaea Fe_dep_repress PF01325.19 gi|15922332|ref|NP_378001.1| - 0.016 15.4 0.0 0.045 13.9 0.0 1.8 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain TrmB PF01978.19 gi|15922332|ref|NP_378001.1| - 0.019 14.8 0.2 0.08 12.8 0.1 2.2 1 1 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB VWA_2 PF13519.6 gi|15922332|ref|NP_378001.1| - 0.021 15.5 0.0 2.7 8.7 0.0 2.7 3 0 0 3 3 3 0 von Willebrand factor type A domain DUF4143 PF13635.6 gi|15922332|ref|NP_378001.1| - 0.052 13.7 0.1 0.11 12.6 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4143) PDDEXK_9 PF08011.11 gi|15922332|ref|NP_378001.1| - 0.058 13.3 0.1 0.17 11.8 0.1 1.8 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily AAA_24 PF13479.6 gi|15922332|ref|NP_378001.1| - 0.069 12.9 0.1 0.26 11.0 0.0 1.9 2 0 0 2 2 2 0 AAA domain HSDR_N_2 PF13588.6 gi|15922332|ref|NP_378001.1| - 0.13 12.3 0.0 0.31 11.1 0.0 1.7 1 0 0 1 1 1 0 Type I restriction enzyme R protein N terminus (HSDR_N) HSDR_N PF04313.14 gi|15922332|ref|NP_378001.1| - 0.15 12.0 0.2 0.35 10.8 0.0 1.7 2 0 0 2 2 2 0 Type I restriction enzyme R protein N terminus (HSDR_N) HTH_27 PF13463.6 gi|15922332|ref|NP_378001.1| - 0.16 12.4 0.4 1.3 9.6 0.0 2.6 3 0 0 3 3 3 0 Winged helix DNA-binding domain PaREP1 PF05942.11 gi|15922333|ref|NP_378002.1| - 2.2e-24 85.6 0.0 2.8e-24 85.2 0.0 1.1 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family HTH_23 PF13384.6 gi|15922334|ref|NP_378003.1| - 9.7e-09 34.8 0.1 1.3e-08 34.4 0.1 1.2 1 0 0 1 1 1 1 Homeodomain-like domain Zn_Tnp_IS1 PF03811.13 gi|15922334|ref|NP_378003.1| - 1.1e-05 25.1 6.2 1.1e-05 25.1 6.2 1.7 2 0 0 2 2 1 1 InsA N-terminal domain Terminase_5 PF06056.12 gi|15922334|ref|NP_378003.1| - 1.1e-05 25.2 0.0 1.4e-05 24.9 0.0 1.2 1 0 0 1 1 1 1 Putative ATPase subunit of terminase (gpP-like) HTH_28 PF13518.6 gi|15922334|ref|NP_378003.1| - 2.1e-05 24.5 0.0 3e-05 24.0 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_38 PF13936.6 gi|15922334|ref|NP_378003.1| - 6.9e-05 22.5 0.0 0.00011 21.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain Sigma70_r4_2 PF08281.12 gi|15922334|ref|NP_378003.1| - 0.00014 21.5 0.0 0.0002 21.0 0.0 1.2 1 0 0 1 1 1 1 Sigma-70, region 4 zf-ribbon_3 PF13248.6 gi|15922334|ref|NP_378003.1| - 0.00016 21.0 1.4 0.38 10.2 0.1 2.2 2 0 0 2 2 2 2 zinc-ribbon domain HTH_Tnp_ISL3 PF13542.6 gi|15922334|ref|NP_378003.1| - 0.00082 18.7 0.0 0.0012 18.2 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain of transposase family ISL3 HTH_29 PF13551.6 gi|15922334|ref|NP_378003.1| - 0.0011 19.0 0.0 0.0015 18.5 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn helix HTH_Tnp_IS630 PF01710.16 gi|15922334|ref|NP_378003.1| - 0.0015 18.6 0.1 0.0021 18.1 0.1 1.2 1 0 0 1 1 1 1 Transposase HTH_Tnp_1 PF01527.20 gi|15922334|ref|NP_378003.1| - 0.002 18.4 0.0 0.0028 17.9 0.0 1.2 1 0 0 1 1 1 1 Transposase Zn_Tnp_IS1595 PF12760.7 gi|15922334|ref|NP_378003.1| - 0.0055 16.7 4.8 0.0082 16.1 4.8 1.3 1 0 0 1 1 1 1 Transposase zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|15922334|ref|NP_378003.1| - 0.012 15.5 1.4 0.023 14.6 1.4 1.4 1 0 0 1 1 1 0 Putative transposase DNA-binding domain Lar_restr_allev PF14354.6 gi|15922334|ref|NP_378003.1| - 0.021 15.2 0.9 0.036 14.4 0.9 1.3 1 0 0 1 1 1 0 Restriction alleviation protein Lar HTH_Tnp_IS1 PF12759.7 gi|15922334|ref|NP_378003.1| - 0.024 14.3 0.0 0.038 13.6 0.0 1.3 1 0 0 1 1 1 0 InsA C-terminal domain GerE PF00196.19 gi|15922334|ref|NP_378003.1| - 0.032 13.8 0.0 0.045 13.3 0.0 1.2 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family CENP-B_N PF04218.13 gi|15922334|ref|NP_378003.1| - 0.039 13.6 0.0 0.057 13.1 0.0 1.3 1 0 0 1 1 1 0 CENP-B N-terminal DNA-binding domain Zn-ribbon_8 PF09723.10 gi|15922334|ref|NP_378003.1| - 0.041 14.0 5.0 0.78 9.9 0.8 2.6 2 1 0 2 2 2 0 Zinc ribbon domain HTH_40 PF14493.6 gi|15922334|ref|NP_378003.1| - 0.081 13.4 0.0 0.099 13.1 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain Phage_terminase PF10668.9 gi|15922334|ref|NP_378003.1| - 0.082 12.9 0.0 0.14 12.2 0.0 1.5 1 0 0 1 1 1 0 Phage terminase small subunit RNA_POL_M_15KD PF02150.16 gi|15922334|ref|NP_378003.1| - 0.083 12.8 1.0 0.16 11.9 1.0 1.5 1 0 0 1 1 1 0 RNA polymerases M/15 Kd subunit DUF1804 PF08822.11 gi|15922334|ref|NP_378003.1| - 0.091 12.7 0.1 0.11 12.5 0.1 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1804) zf_UBZ PF18439.1 gi|15922334|ref|NP_378003.1| - 0.12 12.0 2.6 0.6 9.7 0.1 2.5 3 0 0 3 3 3 0 Ubiquitin-Binding Zinc Finger Zn_Tnp_IS91 PF14319.6 gi|15922334|ref|NP_378003.1| - 0.12 12.4 3.0 0.32 11.0 0.3 2.1 1 1 1 2 2 2 0 Transposase zinc-binding domain DZR PF12773.7 gi|15922334|ref|NP_378003.1| - 0.26 11.3 3.9 2.2 8.4 0.3 2.1 1 1 1 2 2 2 0 Double zinc ribbon Nudix_N_2 PF14803.6 gi|15922334|ref|NP_378003.1| - 0.47 10.4 6.7 1.1 9.2 6.7 1.8 1 1 0 1 1 1 0 Nudix N-terminal zf-Dof PF02701.15 gi|15922334|ref|NP_378003.1| - 1.2 9.3 4.6 8.1 6.7 3.4 2.6 2 1 0 2 2 2 0 Dof domain, zinc finger zinc_ribbon_2 PF13240.6 gi|15922334|ref|NP_378003.1| - 1.9 8.3 6.9 7.6 6.4 0.1 3.1 2 1 0 2 2 2 0 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|15922334|ref|NP_378003.1| - 2.1 7.9 4.8 14 5.3 5.1 2.1 1 1 1 2 2 2 0 TFIIB zinc-binding PaREP1 PF05942.11 gi|15922336|ref|NP_378005.1| - 1.3e-12 47.7 4.3 1.4e-12 47.5 4.3 1.0 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family Glyco_hydro_15 PF00723.21 gi|15922338|ref|NP_378007.1| - 3.6e-19 68.9 0.2 1.1e-14 54.1 0.1 2.9 2 1 1 3 3 3 2 Glycosyl hydrolases family 15 Glucodextran_N PF09137.11 gi|15922338|ref|NP_378007.1| - 2.2e-05 24.1 0.0 3.3e-05 23.6 0.0 1.2 1 0 0 1 1 1 1 Glucodextranase, domain N TetR PF13972.6 gi|15922338|ref|NP_378007.1| - 0.036 13.8 0.2 0.11 12.2 0.1 1.8 2 0 0 2 2 2 0 Bacterial transcriptional repressor Nitro_FeMo-Co PF02579.17 gi|15922339|ref|NP_378008.1| - 7.2e-13 48.7 0.1 7.2e-13 48.7 0.1 1.3 2 0 0 2 2 2 1 Dinitrogenase iron-molybdenum cofactor AMP-binding PF00501.28 gi|15922340|ref|NP_378009.1| - 2e-88 296.9 0.0 2.5e-88 296.5 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|15922340|ref|NP_378009.1| - 1.5e-28 99.5 1.2 2.9e-28 98.7 0.5 1.8 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain ACAS_N PF16177.5 gi|15922340|ref|NP_378009.1| - 1.7e-19 69.4 2.5 5.5e-19 67.8 2.5 1.9 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus Scm3 PF10384.9 gi|15922340|ref|NP_378009.1| - 0.097 12.4 0.3 16 5.3 0.0 2.6 2 0 0 2 2 2 0 Centromere protein Scm3 Glyco_tranf_2_3 PF13641.6 gi|15922341|ref|NP_378010.1| - 1.8e-17 64.0 0.0 2.8e-17 63.4 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glycos_transf_2 PF00535.26 gi|15922341|ref|NP_378010.1| - 1.6e-16 60.6 0.1 2.2e-16 60.1 0.1 1.2 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_trans_2_3 PF13632.6 gi|15922341|ref|NP_378010.1| - 5.7e-10 39.4 0.7 5.7e-10 39.4 0.7 2.2 2 1 0 2 2 2 1 Glycosyl transferase family group 2 Glyco_transf_21 PF13506.6 gi|15922341|ref|NP_378010.1| - 1.9e-07 30.8 0.0 5.6e-07 29.2 0.0 1.7 1 1 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_2 PF10111.9 gi|15922341|ref|NP_378010.1| - 6e-06 25.9 0.8 1.1e-05 25.0 0.1 1.9 2 0 0 2 2 2 1 Glycosyltransferase like family 2 Osmo_MPGsynth PF09488.10 gi|15922341|ref|NP_378010.1| - 0.024 13.3 0.0 1 8.0 0.0 2.1 2 0 0 2 2 2 0 Mannosyl-3-phosphoglycerate synthase (osmo_MPGsynth) PgaPase_1 PF06162.12 gi|15922341|ref|NP_378010.1| - 0.097 12.4 0.1 8.7 6.1 0.0 2.2 2 0 0 2 2 2 0 Putative pyroglutamyl peptidase PgaPase_1 Lactamase_B PF00753.27 gi|15922342|ref|NP_378011.1| - 1.1e-21 77.7 0.3 1.4e-21 77.5 0.3 1.1 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_2 PF12706.7 gi|15922342|ref|NP_378011.1| - 0.022 14.3 0.0 0.028 13.9 0.0 1.3 1 0 0 1 1 1 0 Beta-lactamase superfamily domain Lyase_1 PF00206.20 gi|15922343|ref|NP_378012.1| - 8.3e-104 347.3 0.1 1e-103 347.1 0.1 1.1 1 0 0 1 1 1 1 Lyase FumaraseC_C PF10415.9 gi|15922343|ref|NP_378012.1| - 2.8e-12 46.8 0.0 2.1e-11 44.1 0.0 2.4 2 0 0 2 2 2 1 Fumarase C C-terminus RuvA_C PF07499.13 gi|15922343|ref|NP_378012.1| - 0.082 13.4 0.0 0.49 10.9 0.0 2.3 2 0 0 2 2 2 0 RuvA, C-terminal domain NUDIX PF00293.28 gi|15922344|ref|NP_378013.1| - 1.1e-13 51.3 0.0 1.5e-13 50.9 0.0 1.1 1 0 0 1 1 1 1 NUDIX domain NUDIX_4 PF14815.6 gi|15922344|ref|NP_378013.1| - 7.8e-05 22.6 0.0 9.4e-05 22.4 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain Esterase PF00756.20 gi|15922346|ref|NP_378015.1| - 1.4e-13 51.1 0.0 3e-13 50.0 0.0 1.6 1 1 0 1 1 1 1 Putative esterase Abhydrolase_1 PF00561.20 gi|15922346|ref|NP_378015.1| - 0.0048 16.6 0.0 0.0076 15.9 0.0 1.3 1 0 0 1 1 1 1 alpha/beta hydrolase fold DUF2920 PF11144.8 gi|15922346|ref|NP_378015.1| - 0.024 13.8 0.1 0.038 13.2 0.1 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2920) Hydrolase_4 PF12146.8 gi|15922346|ref|NP_378015.1| - 0.055 12.7 0.0 0.083 12.1 0.0 1.3 1 0 0 1 1 1 0 Serine aminopeptidase, S33 Abhydrolase_2 PF02230.16 gi|15922346|ref|NP_378015.1| - 0.17 11.6 0.1 1.9 8.3 0.0 2.2 2 0 0 2 2 2 0 Phospholipase/Carboxylesterase Na_H_Exchanger PF00999.21 gi|15922347|ref|NP_378016.1| - 1.1e-22 80.4 48.3 1.1e-22 80.4 48.3 2.1 2 0 0 2 2 2 1 Sodium/hydrogen exchanger family DUF429 PF04250.13 gi|15922348|ref|NP_378017.1| - 1e-05 25.5 0.0 0.25 11.1 0.0 3.0 1 1 1 2 2 2 2 Protein of unknown function (DUF429) COG4 PF08318.12 gi|15922348|ref|NP_378017.1| - 0.053 12.6 0.0 0.056 12.5 0.0 1.2 1 0 0 1 1 1 0 COG4 transport protein TIM PF00121.18 gi|15922349|ref|NP_378018.1| - 1.6e-13 50.6 0.0 3.1e-13 49.7 0.0 1.4 2 0 0 2 2 2 1 Triosephosphate isomerase ThiG PF05690.14 gi|15922349|ref|NP_378018.1| - 2.9e-05 23.5 1.8 4.3e-05 23.0 0.4 1.8 2 0 0 2 2 2 1 Thiazole biosynthesis protein ThiG FMN_dh PF01070.18 gi|15922349|ref|NP_378018.1| - 0.00021 20.4 0.1 0.00034 19.8 0.1 1.3 1 0 0 1 1 1 1 FMN-dependent dehydrogenase Glu_synthase PF01645.17 gi|15922349|ref|NP_378018.1| - 0.00038 19.7 0.1 0.00076 18.7 0.1 1.4 1 0 0 1 1 1 1 Conserved region in glutamate synthase NMO PF03060.15 gi|15922349|ref|NP_378018.1| - 0.0014 18.1 0.4 0.0023 17.4 0.1 1.6 2 0 0 2 2 2 1 Nitronate monooxygenase His_biosynth PF00977.21 gi|15922349|ref|NP_378018.1| - 0.0015 18.0 1.1 0.0031 17.0 0.4 1.8 2 0 0 2 2 2 1 Histidine biosynthesis protein Trp_syntA PF00290.20 gi|15922349|ref|NP_378018.1| - 0.003 16.4 1.0 0.0051 15.7 0.4 1.6 2 0 0 2 2 2 1 Tryptophan synthase alpha chain PcrB PF01884.17 gi|15922349|ref|NP_378018.1| - 0.0041 16.6 3.2 0.041 13.3 0.8 2.5 3 0 0 3 3 3 1 PcrB family IGPS PF00218.21 gi|15922349|ref|NP_378018.1| - 0.01 15.0 0.0 0.017 14.3 0.0 1.3 1 0 0 1 1 1 0 Indole-3-glycerol phosphate synthase DHO_dh PF01180.21 gi|15922349|ref|NP_378018.1| - 0.011 15.0 0.1 0.016 14.5 0.1 1.3 1 0 0 1 1 1 0 Dihydroorotate dehydrogenase DUF561 PF04481.12 gi|15922349|ref|NP_378018.1| - 0.012 14.8 1.2 0.029 13.5 0.1 2.0 2 1 0 2 2 2 0 Protein of unknown function (DUF561) NanE PF04131.14 gi|15922349|ref|NP_378018.1| - 0.025 13.8 0.0 0.046 12.9 0.0 1.5 1 0 0 1 1 1 0 Putative N-acetylmannosamine-6-phosphate epimerase IMPDH PF00478.25 gi|15922349|ref|NP_378018.1| - 0.029 13.4 0.3 0.045 12.8 0.3 1.3 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain G3P_antiterm PF04309.12 gi|15922349|ref|NP_378018.1| - 0.051 13.0 1.6 0.056 12.9 0.2 1.7 2 0 0 2 2 2 0 Glycerol-3-phosphate responsive antiterminator SHP PF03579.13 gi|15922350|ref|NP_378019.1| - 0.17 11.9 4.4 3.1 7.8 2.1 2.7 1 1 2 3 3 3 0 Small hydrophobic protein AviRa PF11599.8 gi|15922351|ref|NP_378020.1| - 0.13 11.7 0.0 0.19 11.2 0.0 1.3 1 0 0 1 1 1 0 RRNA methyltransferase AviRa BPD_transp_1 PF00528.22 gi|15922352|ref|NP_378021.1| - 4e-14 52.8 13.9 4e-14 52.8 13.9 2.4 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component SBP_bac_11 PF13531.6 gi|15922353|ref|NP_378022.1| - 7e-27 94.6 0.0 1e-26 94.1 0.0 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_1 PF01547.25 gi|15922353|ref|NP_378022.1| - 2.5e-10 40.8 7.8 3.7e-10 40.3 7.8 1.2 1 0 0 1 1 1 1 Bacterial extracellular solute-binding protein SBP_bac_8 PF13416.6 gi|15922353|ref|NP_378022.1| - 0.00017 21.5 4.3 0.063 13.1 0.6 2.6 1 1 1 2 2 2 2 Bacterial extracellular solute-binding protein ABC_tran PF00005.27 gi|15922354|ref|NP_378023.1| - 1.9e-23 83.5 0.2 3.1e-23 82.8 0.2 1.3 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|15922354|ref|NP_378023.1| - 5.4e-08 33.0 2.4 1.8e-06 28.0 1.6 2.1 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|15922354|ref|NP_378023.1| - 3.2e-06 27.1 9.4 7.2e-06 25.9 9.4 1.7 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|15922354|ref|NP_378023.1| - 0.00056 19.6 0.1 0.0011 18.7 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|15922354|ref|NP_378023.1| - 0.0012 19.3 8.4 0.0031 18.1 8.4 1.8 1 1 0 1 1 1 1 AAA domain AAA_24 PF13479.6 gi|15922354|ref|NP_378023.1| - 0.0033 17.2 0.5 0.015 15.0 0.2 2.0 2 1 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|15922354|ref|NP_378023.1| - 0.0058 16.9 1.0 0.026 14.8 1.0 1.9 1 1 0 1 1 1 1 AAA domain Pox_A32 PF04665.12 gi|15922354|ref|NP_378023.1| - 0.0068 15.9 2.8 0.045 13.2 0.1 2.3 2 1 0 2 2 2 1 Poxvirus A32 protein SMC_N PF02463.19 gi|15922354|ref|NP_378023.1| - 0.0089 15.5 0.3 0.021 14.3 0.1 1.7 2 0 0 2 2 2 1 RecF/RecN/SMC N terminal domain Zeta_toxin PF06414.12 gi|15922354|ref|NP_378023.1| - 0.011 15.1 0.1 0.086 12.1 0.0 2.0 2 0 0 2 2 2 0 Zeta toxin AAA_33 PF13671.6 gi|15922354|ref|NP_378023.1| - 0.015 15.4 0.3 0.11 12.7 0.3 2.0 1 1 0 1 1 1 0 AAA domain T2SSE PF00437.20 gi|15922354|ref|NP_378023.1| - 0.016 14.3 0.0 0.026 13.6 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein NACHT PF05729.12 gi|15922354|ref|NP_378023.1| - 0.059 13.3 0.1 0.097 12.6 0.1 1.3 1 0 0 1 1 1 0 NACHT domain ATP_bind_1 PF03029.17 gi|15922354|ref|NP_378023.1| - 0.086 12.6 0.2 0.28 10.9 0.1 1.8 2 0 0 2 2 2 0 Conserved hypothetical ATP binding protein AAA_30 PF13604.6 gi|15922354|ref|NP_378023.1| - 0.086 12.5 0.0 0.13 12.0 0.0 1.4 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|15922354|ref|NP_378023.1| - 0.12 12.7 0.0 0.15 12.4 0.0 1.3 1 1 0 1 1 1 0 AAA ATPase domain DUF927 PF06048.11 gi|15922354|ref|NP_378023.1| - 0.13 11.8 0.2 14 5.1 0.0 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF927) Dynamin_N PF00350.23 gi|15922354|ref|NP_378023.1| - 4.3 7.4 6.6 44 4.1 6.6 2.0 1 1 0 1 1 1 0 Dynamin family DUF4147 PF13660.6 gi|15922355|ref|NP_378024.1| - 2.7e-48 164.5 0.0 3.7e-48 164.1 0.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4147) MOFRL PF05161.13 gi|15922355|ref|NP_378024.1| - 4.3e-25 88.0 0.0 8.6e-25 87.1 0.0 1.5 1 0 0 1 1 1 1 MOFRL family DUF2250 PF10007.9 gi|15922356|ref|NP_378025.1| - 1.9e-06 27.9 0.3 5e-06 26.5 0.3 1.7 1 1 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) DUF2513 PF10711.9 gi|15922356|ref|NP_378025.1| - 0.022 15.0 0.0 0.033 14.5 0.0 1.4 1 1 0 1 1 1 0 Hypothetical protein (DUF2513) HxlR PF01638.17 gi|15922356|ref|NP_378025.1| - 0.056 13.3 0.1 1 9.3 0.1 2.5 2 1 0 2 2 2 0 HxlR-like helix-turn-helix DUF2397 PF09660.10 gi|15922356|ref|NP_378025.1| - 0.12 11.3 0.0 0.12 11.3 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF2397) Fe_dep_repr_C PF02742.15 gi|15922357|ref|NP_378026.1| - 3.5e-27 94.3 1.1 5e-27 93.8 0.3 1.7 2 0 0 2 2 1 1 Iron dependent repressor, metal binding and dimerisation domain Fe_dep_repress PF01325.19 gi|15922357|ref|NP_378026.1| - 2.1e-11 43.8 0.8 8.7e-11 41.9 0.1 2.4 3 0 0 3 3 2 1 Iron dependent repressor, N-terminal DNA binding domain HTH_45 PF14947.6 gi|15922357|ref|NP_378026.1| - 3.8e-06 26.8 1.6 7.6e-06 25.8 0.2 2.2 2 1 0 2 2 2 1 Winged helix-turn-helix MarR PF01047.22 gi|15922357|ref|NP_378026.1| - 4.7e-06 26.4 0.0 1.4e-05 24.9 0.0 1.8 1 0 0 1 1 1 1 MarR family FeoA PF04023.14 gi|15922357|ref|NP_378026.1| - 6.4e-06 26.3 0.0 1.5e-05 25.2 0.0 1.6 1 0 0 1 1 1 1 FeoA domain MarR_2 PF12802.7 gi|15922357|ref|NP_378026.1| - 5.8e-05 22.9 0.0 0.00013 21.8 0.0 1.6 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.20 gi|15922357|ref|NP_378026.1| - 8.2e-05 22.4 0.0 0.00017 21.4 0.0 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_24 PF13412.6 gi|15922357|ref|NP_378026.1| - 0.00018 21.0 0.1 0.00069 19.1 0.1 2.1 2 0 0 2 2 1 1 Winged helix-turn-helix DNA-binding GntR PF00392.21 gi|15922357|ref|NP_378026.1| - 0.00024 20.7 0.0 0.00095 18.8 0.0 2.0 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family TrmB PF01978.19 gi|15922357|ref|NP_378026.1| - 0.00041 20.2 0.3 0.00089 19.1 0.3 1.6 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_27 PF13463.6 gi|15922357|ref|NP_378026.1| - 0.00046 20.6 0.0 0.00099 19.6 0.0 1.6 1 0 0 1 1 1 1 Winged helix DNA-binding domain HemN_C PF06969.16 gi|15922357|ref|NP_378026.1| - 0.0011 19.0 0.0 0.0027 17.7 0.0 1.7 1 0 0 1 1 1 1 HemN C-terminal domain DUF4423 PF14394.6 gi|15922357|ref|NP_378026.1| - 0.0021 17.8 1.6 0.0036 17.0 0.1 2.0 3 0 0 3 3 2 1 Domain of unknown function (DUF4423) HTH_41 PF14502.6 gi|15922357|ref|NP_378026.1| - 0.0024 17.5 0.0 0.0061 16.2 0.0 1.8 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_DeoR PF08220.12 gi|15922357|ref|NP_378026.1| - 0.0028 17.4 0.0 0.0058 16.4 0.0 1.5 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain DUF2250 PF10007.9 gi|15922357|ref|NP_378026.1| - 0.0033 17.5 0.2 0.0077 16.3 0.2 1.7 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2250) HTH_Crp_2 PF13545.6 gi|15922357|ref|NP_378026.1| - 0.0051 16.8 0.0 0.013 15.4 0.0 1.7 1 0 0 1 1 1 1 Crp-like helix-turn-helix domain HTH_36 PF13730.6 gi|15922357|ref|NP_378026.1| - 0.0065 16.4 0.0 0.013 15.5 0.0 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_1 PF00126.27 gi|15922357|ref|NP_378026.1| - 0.0069 16.3 0.0 0.026 14.4 0.0 2.0 2 1 0 2 2 1 1 Bacterial regulatory helix-turn-helix protein, lysR family AAA_assoc_C PF09821.9 gi|15922357|ref|NP_378026.1| - 0.0089 16.6 0.1 0.015 15.8 0.1 1.4 1 0 0 1 1 1 1 C-terminal AAA-associated domain Ribosomal_S19e PF01090.19 gi|15922357|ref|NP_378026.1| - 0.019 14.7 0.1 0.038 13.7 0.1 1.4 1 0 0 1 1 1 0 Ribosomal protein S19e HTH_28 PF13518.6 gi|15922357|ref|NP_378026.1| - 0.025 14.7 0.0 0.17 12.0 0.0 2.1 2 0 0 2 2 2 0 Helix-turn-helix domain HTH_11 PF08279.12 gi|15922357|ref|NP_378026.1| - 0.026 14.5 0.1 0.12 12.3 0.0 2.3 1 1 1 2 2 2 0 HTH domain B-block_TFIIIC PF04182.12 gi|15922357|ref|NP_378026.1| - 0.03 14.5 0.0 0.066 13.4 0.0 1.6 1 0 0 1 1 1 0 B-block binding subunit of TFIIIC HxlR PF01638.17 gi|15922357|ref|NP_378026.1| - 0.045 13.6 0.0 0.12 12.3 0.0 1.7 1 1 0 1 1 1 0 HxlR-like helix-turn-helix HTH_20 PF12840.7 gi|15922357|ref|NP_378026.1| - 0.052 13.6 0.0 0.13 12.3 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain PadR PF03551.14 gi|15922357|ref|NP_378026.1| - 0.073 13.0 0.0 0.17 11.9 0.0 1.7 1 1 0 1 1 1 0 Transcriptional regulator PadR-like family LexA_DNA_bind PF01726.16 gi|15922357|ref|NP_378026.1| - 0.085 12.6 0.0 0.25 11.1 0.0 1.8 1 0 0 1 1 1 0 LexA DNA binding domain FeoC PF09012.10 gi|15922357|ref|NP_378026.1| - 0.098 12.7 0.0 0.18 11.9 0.0 1.4 1 0 0 1 1 1 0 FeoC like transcriptional regulator AbiEi_4 PF13338.6 gi|15922357|ref|NP_378026.1| - 0.14 12.3 0.0 0.29 11.3 0.0 1.5 1 0 0 1 1 1 0 Transcriptional regulator, AbiEi antitoxin EAP30 PF04157.16 gi|15922357|ref|NP_378026.1| - 0.14 11.4 0.0 2.4 7.4 0.0 2.0 2 0 0 2 2 2 0 EAP30/Vps36 family DUF456 PF04306.13 gi|15922358|ref|NP_378027.1| - 0.0013 19.0 2.4 0.0019 18.5 2.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF456) Rick_17kDa_Anti PF05433.15 gi|15922358|ref|NP_378027.1| - 0.33 10.9 10.8 0.6 10.0 10.8 1.5 1 0 0 1 1 1 0 Glycine zipper 2TM domain DUF1003 PF06210.11 gi|15922359|ref|NP_378028.1| - 6.8 6.8 7.9 0.2 11.8 0.6 1.9 2 0 0 2 2 2 0 Protein of unknown function (DUF1003) Methyltransf_11 PF08241.12 gi|15922360|ref|NP_378029.1| - 2.1e-16 60.4 0.0 3.1e-16 59.8 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|15922360|ref|NP_378029.1| - 1.6e-12 47.9 0.0 2.7e-12 47.2 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|15922360|ref|NP_378029.1| - 2.5e-08 33.5 0.0 4e-08 32.9 0.0 1.4 1 0 0 1 1 1 1 ubiE/COQ5 methyltransferase family Methyltransf_12 PF08242.12 gi|15922360|ref|NP_378029.1| - 1.4e-07 32.2 0.0 2.4e-07 31.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|15922360|ref|NP_378029.1| - 1.6e-06 28.0 0.0 2.6e-06 27.4 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|15922360|ref|NP_378029.1| - 3e-05 23.8 0.0 5e-05 23.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_8 PF05148.15 gi|15922360|ref|NP_378029.1| - 0.00024 21.0 0.1 0.00039 20.3 0.1 1.4 1 0 0 1 1 1 1 Hypothetical methyltransferase CBS PF00571.28 gi|15922361|ref|NP_378030.1| - 7e-16 58.4 12.0 4.6e-06 27.0 0.0 4.3 4 0 0 4 4 4 4 CBS domain MobB PF03205.14 gi|15922362|ref|NP_378031.1| - 1.2e-24 86.6 0.3 1.2e-24 86.6 0.3 1.9 2 1 0 2 2 2 1 Molybdopterin guanine dinucleotide synthesis protein B PepSY_2 PF13670.6 gi|15922362|ref|NP_378031.1| - 0.15 12.1 0.1 0.33 11.0 0.1 1.5 1 0 0 1 1 1 0 Peptidase propeptide and YPEB domain MoeA_N PF03453.17 gi|15922363|ref|NP_378032.1| - 8.7e-33 113.3 0.0 1.3e-32 112.7 0.0 1.3 1 0 0 1 1 1 1 MoeA N-terminal region (domain I and II) MoCF_biosynth PF00994.24 gi|15922363|ref|NP_378032.1| - 1.8e-16 60.1 0.0 3.5e-16 59.2 0.0 1.5 1 0 0 1 1 1 1 Probable molybdopterin binding domain 7TMR-HDED PF07697.11 gi|15922363|ref|NP_378032.1| - 0.034 14.3 0.1 0.063 13.4 0.1 1.4 1 0 0 1 1 1 0 7TM-HD extracellular NTP_transf_3 PF12804.7 gi|15922364|ref|NP_378033.1| - 3.5e-16 60.0 0.0 4.4e-16 59.6 0.0 1.1 1 0 0 1 1 1 1 MobA-like NTP transferase domain DOT1 PF08123.13 gi|15922365|ref|NP_378034.1| - 0.00028 20.5 0.0 0.00066 19.3 0.0 1.5 2 0 0 2 2 2 1 Histone methylation protein DOT1 Methyltransf_25 PF13649.6 gi|15922365|ref|NP_378034.1| - 0.0086 16.8 0.0 0.013 16.2 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain RrnaAD PF00398.20 gi|15922365|ref|NP_378034.1| - 0.021 13.9 0.0 0.025 13.6 0.0 1.1 1 0 0 1 1 1 0 Ribosomal RNA adenine dimethylase MetW PF07021.12 gi|15922365|ref|NP_378034.1| - 0.032 13.8 0.1 0.26 10.8 0.1 2.0 2 0 0 2 2 2 0 Methionine biosynthesis protein MetW Methyltransf_4 PF02390.17 gi|15922365|ref|NP_378034.1| - 0.14 11.6 0.0 0.19 11.2 0.0 1.3 1 0 0 1 1 1 0 Putative methyltransferase PrmA PF06325.13 gi|15922365|ref|NP_378034.1| - 0.16 11.3 0.1 0.2 11.0 0.1 1.1 1 0 0 1 1 1 0 Ribosomal protein L11 methyltransferase (PrmA) Diphthami_syn_2 PF01902.17 gi|15922366|ref|NP_378035.1| - 9.9e-61 205.0 0.0 1.1e-60 204.9 0.0 1.0 1 0 0 1 1 1 1 Diphthamide synthase QueC PF06508.13 gi|15922366|ref|NP_378035.1| - 0.021 14.3 0.0 0.11 12.0 0.0 2.2 3 0 0 3 3 3 0 Queuosine biosynthesis protein QueC ThiI PF02568.14 gi|15922366|ref|NP_378035.1| - 0.073 12.6 0.0 8 6.0 0.0 2.3 2 0 0 2 2 2 0 Thiamine biosynthesis protein (ThiI) Amidohydro_1 PF01979.20 gi|15922367|ref|NP_378036.1| - 1.5e-48 165.9 0.0 1.8e-48 165.6 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|15922367|ref|NP_378036.1| - 2e-07 30.9 0.0 0.0027 17.2 0.0 2.1 2 0 0 2 2 2 2 Amidohydrolase family A_deaminase PF00962.22 gi|15922367|ref|NP_378036.1| - 2.1e-05 24.0 0.0 3.3e-05 23.4 0.0 1.2 1 0 0 1 1 1 1 Adenosine/AMP deaminase TrmB PF01978.19 gi|15922368|ref|NP_378037.1| - 5.5e-16 58.2 0.1 7.7e-16 57.7 0.1 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|15922368|ref|NP_378037.1| - 8.2e-07 28.8 0.0 1.3e-06 28.1 0.0 1.3 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.20 gi|15922368|ref|NP_378037.1| - 1.4e-06 28.1 0.8 2.7e-06 27.1 0.3 1.8 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family MarR PF01047.22 gi|15922368|ref|NP_378037.1| - 1.6e-06 28.0 0.1 2.7e-06 27.2 0.1 1.4 1 0 0 1 1 1 1 MarR family TFIIE_alpha PF02002.17 gi|15922368|ref|NP_378037.1| - 5.2e-05 23.0 0.2 6.6e-05 22.7 0.2 1.2 1 0 0 1 1 1 1 TFIIE alpha subunit HTH_27 PF13463.6 gi|15922368|ref|NP_378037.1| - 0.0013 19.2 0.0 0.0021 18.5 0.0 1.4 1 0 0 1 1 1 1 Winged helix DNA-binding domain Fe_dep_repress PF01325.19 gi|15922368|ref|NP_378037.1| - 0.0066 16.6 0.1 0.012 15.9 0.1 1.5 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain HTH_20 PF12840.7 gi|15922368|ref|NP_378037.1| - 0.0085 16.1 0.1 0.017 15.1 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_36 PF13730.6 gi|15922368|ref|NP_378037.1| - 0.021 14.8 0.2 0.047 13.7 0.2 1.7 1 1 0 1 1 1 0 Helix-turn-helix domain HTH_24 PF13412.6 gi|15922368|ref|NP_378037.1| - 0.021 14.4 1.3 0.065 12.8 0.2 2.4 2 1 0 2 2 2 0 Winged helix-turn-helix DNA-binding z-alpha PF02295.17 gi|15922368|ref|NP_378037.1| - 0.04 14.0 2.5 0.17 12.0 0.2 2.1 2 0 0 2 2 2 0 Adenosine deaminase z-alpha domain RP-C PF03428.13 gi|15922368|ref|NP_378037.1| - 0.078 12.6 0.2 0.15 11.7 0.2 1.5 1 1 0 1 1 1 0 Replication protein C N-terminal domain DUF2250 PF10007.9 gi|15922368|ref|NP_378037.1| - 0.1 12.7 0.2 0.16 12.1 0.2 1.4 1 1 0 1 1 1 0 Uncharacterized protein conserved in archaea (DUF2250) DUF4423 PF14394.6 gi|15922368|ref|NP_378037.1| - 0.14 11.9 0.8 0.4 10.4 0.1 1.8 2 0 0 2 2 2 0 Domain of unknown function (DUF4423) HTH_IclR PF09339.10 gi|15922368|ref|NP_378037.1| - 0.14 12.0 0.1 0.26 11.1 0.1 1.4 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_DeoR PF08220.12 gi|15922368|ref|NP_378037.1| - 0.15 11.8 0.1 0.35 10.7 0.1 1.6 1 0 0 1 1 1 0 DeoR-like helix-turn-helix domain GntR PF00392.21 gi|15922368|ref|NP_378037.1| - 0.16 11.7 0.1 1 9.1 0.0 2.0 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family HisKA PF00512.25 gi|15922368|ref|NP_378037.1| - 0.21 11.6 0.7 1.2 9.2 0.1 2.1 1 1 1 2 2 2 0 His Kinase A (phospho-acceptor) domain MazE_antitoxin PF04014.18 gi|15922369|ref|NP_378038.1| - 5.8e-11 42.0 0.4 6.1e-11 42.0 0.4 1.1 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin eIF-1a PF01176.19 gi|15922369|ref|NP_378038.1| - 0.0002 21.1 0.2 0.00024 20.8 0.2 1.3 1 0 0 1 1 1 1 Translation initiation factor 1A / IF-1 PrlF_antitoxin PF15937.5 gi|15922369|ref|NP_378038.1| - 0.00044 20.6 0.2 0.00048 20.5 0.2 1.1 1 0 0 1 1 1 1 prlF antitoxin for toxin YhaV_toxin DEAD_2 PF06733.15 gi|15922369|ref|NP_378038.1| - 0.035 13.7 0.2 0.039 13.6 0.2 1.1 1 0 0 1 1 1 0 DEAD_2 TatD_DNase PF01026.21 gi|15922370|ref|NP_378039.1| - 3.9e-55 187.0 0.1 4.4e-55 186.8 0.1 1.0 1 0 0 1 1 1 1 TatD related DNase COX1 PF00115.20 gi|15922373|ref|NP_378042.1| - 8.6e-73 245.6 63.4 8.6e-73 245.6 63.4 2.9 1 1 1 3 3 3 2 Cytochrome C and Quinol oxidase polypeptide I HAD_2 PF13419.6 gi|15922375|ref|NP_378044.1| - 1.2e-27 97.2 1.0 1.5e-27 96.9 1.0 1.1 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|15922375|ref|NP_378044.1| - 2.3e-18 67.2 0.7 7.9e-15 55.7 0.7 2.1 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|15922375|ref|NP_378044.1| - 3.3e-07 30.9 0.1 1.2e-06 29.1 0.1 1.9 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase Hydrolase_3 PF08282.12 gi|15922375|ref|NP_378044.1| - 3.8e-05 23.6 3.2 0.064 13.0 0.1 3.2 3 0 0 3 3 3 2 haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|15922375|ref|NP_378044.1| - 0.014 15.5 0.0 0.18 11.9 0.0 2.3 2 0 0 2 2 2 0 HAD-hyrolase-like Hydrolase_6 PF13344.6 gi|15922375|ref|NP_378044.1| - 0.073 13.2 0.5 0.82 9.8 0.5 2.3 1 1 0 1 1 1 0 Haloacid dehalogenase-like hydrolase ADH_zinc_N PF00107.26 gi|15922376|ref|NP_378045.1| - 1.2e-31 109.3 0.0 2.9e-31 108.2 0.0 1.6 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_N PF08240.12 gi|15922376|ref|NP_378045.1| - 8.2e-30 102.9 1.2 8.2e-30 102.9 1.2 2.2 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain Glu_dehyd_C PF16912.5 gi|15922376|ref|NP_378045.1| - 2.2e-08 33.9 1.0 5.7e-08 32.5 1.0 1.7 1 1 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 gi|15922376|ref|NP_378045.1| - 2.6e-08 35.0 0.0 7.9e-08 33.4 0.0 1.8 2 0 0 2 2 2 1 Zinc-binding dehydrogenase NAD_binding_3 PF03447.16 gi|15922376|ref|NP_378045.1| - 0.0023 18.5 0.6 0.0044 17.7 0.6 1.4 1 0 0 1 1 1 1 Homoserine dehydrogenase, NAD binding domain Sacchrp_dh_NADP PF03435.18 gi|15922376|ref|NP_378045.1| - 0.0081 16.4 0.4 0.019 15.2 0.4 1.6 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain 2-Hacid_dh_C PF02826.19 gi|15922376|ref|NP_378045.1| - 0.018 14.4 0.4 0.033 13.6 0.4 1.4 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|15922376|ref|NP_378045.1| - 0.026 14.8 0.7 0.047 13.9 0.7 1.4 1 0 0 1 1 1 0 TrkA-N domain IlvN PF07991.12 gi|15922376|ref|NP_378045.1| - 0.03 13.9 0.1 0.068 12.7 0.1 1.6 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain HTH_7 PF02796.15 gi|15922376|ref|NP_378045.1| - 0.15 12.2 0.0 0.51 10.5 0.0 2.0 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase Ldh_1_N PF00056.23 gi|15922376|ref|NP_378045.1| - 0.19 11.8 5.0 0.071 13.2 0.7 2.2 2 0 0 2 2 2 0 lactate/malate dehydrogenase, NAD binding domain Glycos_transf_4 PF00953.21 gi|15922377|ref|NP_378046.1| - 5.9e-32 110.8 19.1 5.9e-32 110.8 19.1 2.2 3 0 0 3 3 3 1 Glycosyl transferase family 4 polyprenyl_synt PF00348.17 gi|15922378|ref|NP_378047.1| - 1.1e-75 254.0 0.3 1.4e-75 253.7 0.3 1.1 1 0 0 1 1 1 1 Polyprenyl synthetase FMN_dh PF01070.18 gi|15922379|ref|NP_378048.1| - 6.9e-20 71.4 0.0 1.9e-14 53.4 0.1 2.1 1 1 1 2 2 2 2 FMN-dependent dehydrogenase IMPDH PF00478.25 gi|15922379|ref|NP_378048.1| - 1.6e-05 24.1 4.2 0.0068 15.5 0.7 3.1 3 0 0 3 3 3 2 IMP dehydrogenase / GMP reductase domain Glu_synthase PF01645.17 gi|15922379|ref|NP_378048.1| - 0.0061 15.7 2.0 0.0077 15.4 0.3 1.9 2 0 0 2 2 2 1 Conserved region in glutamate synthase Ubiq-assoc PF09145.10 gi|15922379|ref|NP_378048.1| - 0.078 13.0 0.1 2.7 8.1 0.0 2.6 2 0 0 2 2 2 0 Ubiquitin-associated DnaB_2 PF07261.11 gi|15922381|ref|NP_378050.1| - 0.11 12.3 0.2 0.23 11.2 0.0 1.6 2 0 0 2 2 2 0 Replication initiation and membrane attachment Memo PF01875.17 gi|15922382|ref|NP_378051.1| - 8e-88 294.1 0.1 9.1e-88 293.9 0.1 1.0 1 0 0 1 1 1 1 Memo-like protein RdRP_2 PF00978.21 gi|15922382|ref|NP_378051.1| - 0.056 12.4 0.7 0.074 12.0 0.7 1.1 1 0 0 1 1 1 0 RNA dependent RNA polymerase Ribosomal_S2 PF00318.20 gi|15922383|ref|NP_378052.1| - 7.8e-27 93.9 0.0 5.3e-16 58.5 0.1 2.2 1 1 1 2 2 2 2 Ribosomal protein S2 Peripla_BP_4 PF13407.6 gi|15922383|ref|NP_378052.1| - 0.3 10.6 0.8 0.41 10.2 0.8 1.1 1 0 0 1 1 1 0 Periplasmic binding protein domain RNA_pol_N PF01194.17 gi|15922384|ref|NP_378053.1| - 5.1e-32 110.0 0.2 5.7e-32 109.8 0.2 1.0 1 0 0 1 1 1 1 RNA polymerases N / 8 kDa subunit Ribosomal_S9 PF00380.19 gi|15922385|ref|NP_378054.1| - 3.4e-28 98.6 0.1 3.8e-28 98.4 0.1 1.0 1 0 0 1 1 1 1 Ribosomal protein S9/S16 Ribosomal_L13 PF00572.18 gi|15922386|ref|NP_378055.1| - 1.9e-13 50.8 1.0 2.3e-11 44.0 1.0 2.2 1 1 0 1 1 1 1 Ribosomal protein L13 Ribosomal_L27A PF00828.19 gi|15922387|ref|NP_378056.1| - 1.8e-09 38.3 0.4 4.8e-09 37.0 0.4 1.6 1 1 0 1 1 1 1 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A Ribosomal_L18 PF17135.4 gi|15922387|ref|NP_378056.1| - 3.7e-08 33.0 0.0 4.3e-08 32.8 0.0 1.1 1 0 0 1 1 1 1 Ribosomal protein 60S L18 and 50S L18e RNA_pol_A_bac PF01000.26 gi|15922388|ref|NP_378057.1| - 5.4e-26 91.2 0.0 1.2e-25 90.0 0.0 1.6 2 0 0 2 2 2 1 RNA polymerase Rpb3/RpoA insert domain RNA_pol_L PF01193.24 gi|15922388|ref|NP_378057.1| - 2.5e-10 39.6 0.0 3.2e-10 39.3 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain Fer4_9 PF13187.6 gi|15922388|ref|NP_378057.1| - 6.8e-05 22.9 8.5 0.00024 21.2 3.3 2.3 2 0 0 2 2 2 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15922388|ref|NP_378057.1| - 0.15 12.7 7.9 12 6.5 2.8 2.9 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15922388|ref|NP_378057.1| - 0.56 10.4 12.1 0.16 12.1 1.8 3.0 2 1 1 3 3 3 0 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15922388|ref|NP_378057.1| - 5.3 7.3 17.7 0.39 10.9 1.7 3.5 3 0 0 3 3 3 0 4Fe-4S binding domain Ribosomal_S11 PF00411.19 gi|15922389|ref|NP_378058.1| - 7.7e-49 164.7 2.4 9.1e-49 164.5 2.4 1.0 1 0 0 1 1 1 1 Ribosomal protein S11 S4 PF01479.25 gi|15922390|ref|NP_378059.1| - 2.3e-16 59.2 0.2 4.9e-16 58.2 0.2 1.6 1 0 0 1 1 1 1 S4 domain Ribosomal_S4 PF00163.19 gi|15922390|ref|NP_378059.1| - 3.9e-05 24.5 1.5 0.00032 21.5 1.2 2.4 2 2 0 2 2 2 1 Ribosomal protein S4/S9 N-terminal domain Ribosomal_S13 PF00416.22 gi|15922391|ref|NP_378060.1| - 4.3e-49 166.1 0.5 5.7e-49 165.8 0.5 1.2 1 0 0 1 1 1 1 Ribosomal protein S13/S18 HHH_4 PF14490.6 gi|15922391|ref|NP_378060.1| - 0.0018 18.2 0.0 0.0033 17.4 0.0 1.5 1 0 0 1 1 1 1 Helix-hairpin-helix containing domain FbpA PF05833.11 gi|15922391|ref|NP_378060.1| - 0.0073 15.1 0.0 0.0093 14.8 0.0 1.2 1 0 0 1 1 1 1 Fibronectin-binding protein A N-terminus (FbpA) AIRS_C PF02769.22 gi|15922392|ref|NP_378061.1| - 1.7e-10 41.2 0.0 4.1e-10 40.0 0.0 1.7 1 0 0 1 1 1 1 AIR synthase related protein, C-terminal domain AIRS PF00586.24 gi|15922392|ref|NP_378061.1| - 4.1e-07 30.6 0.9 1.1e-06 29.2 0.9 1.7 1 1 0 1 1 1 1 AIR synthase related protein, N-terminal domain UPF0047 PF01894.17 gi|15922393|ref|NP_378062.1| - 2.3e-38 130.9 0.0 2.7e-38 130.7 0.0 1.0 1 0 0 1 1 1 1 Uncharacterised protein family UPF0047 tRNA-synt_1b PF00579.25 gi|15922395|ref|NP_378064.1| - 1.4e-35 123.1 1.3 5.1e-24 85.1 0.2 2.0 2 0 0 2 2 2 2 tRNA synthetases class I (W and Y) Toprim_4 PF13662.6 gi|15922396|ref|NP_378065.1| - 4.7e-10 39.8 1.3 1.7e-09 38.0 0.2 2.3 2 0 0 2 2 2 1 Toprim domain Toprim_2 PF13155.6 gi|15922396|ref|NP_378065.1| - 7.2e-06 26.4 0.1 2.6e-05 24.5 0.0 2.1 2 1 0 2 2 2 1 Toprim-like Toprim PF01751.22 gi|15922396|ref|NP_378065.1| - 0.00021 21.5 0.2 0.00021 21.5 0.2 2.7 3 1 0 3 3 3 1 Toprim domain Pro_sub2 PF18513.1 gi|15922396|ref|NP_378065.1| - 0.008 16.3 0.1 0.026 14.7 0.1 1.8 1 0 0 1 1 1 1 Prodomain subtilisin 2 PfkB PF00294.24 gi|15922396|ref|NP_378065.1| - 0.07 12.4 0.0 0.1 11.9 0.0 1.2 1 0 0 1 1 1 0 pfkB family carbohydrate kinase DUF2570 PF10828.8 gi|15922396|ref|NP_378065.1| - 0.091 12.6 3.7 0.88 9.4 3.7 2.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2570) DNA_pol_B PF00136.21 gi|15922397|ref|NP_378066.1| - 8.1e-75 252.3 0.1 1.6e-74 251.3 0.1 1.4 1 0 0 1 1 1 1 DNA polymerase family B DNA_pol_B_exo1 PF03104.19 gi|15922397|ref|NP_378066.1| - 2.7e-46 158.2 7.4 2.2e-44 152.0 7.4 2.4 1 1 0 1 1 1 1 DNA polymerase family B, exonuclease domain RNase_H_2 PF13482.6 gi|15922397|ref|NP_378066.1| - 6.5e-10 39.2 0.1 2.2e-09 37.6 0.1 1.9 1 0 0 1 1 1 1 RNase_H superfamily DNA_pol_B_2 PF03175.13 gi|15922397|ref|NP_378066.1| - 0.00016 20.6 0.1 0.00037 19.5 0.1 1.5 1 0 0 1 1 1 1 DNA polymerase type B, organellar and viral DNA_pol_B_exo2 PF10108.9 gi|15922397|ref|NP_378066.1| - 0.0007 19.3 0.1 0.0013 18.4 0.1 1.3 1 0 0 1 1 1 1 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB TetR_C_24 PF17932.1 gi|15922397|ref|NP_378066.1| - 0.034 14.4 0.1 0.076 13.3 0.1 1.5 1 0 0 1 1 1 0 Tetracyclin repressor-like, C-terminal domain OmpH PF03938.14 gi|15922397|ref|NP_378066.1| - 0.036 14.4 0.0 0.18 12.1 0.0 2.1 2 0 0 2 2 2 0 Outer membrane protein (OmpH-like) Acetyltransf_1 PF00583.25 gi|15922398|ref|NP_378067.1| - 5.2e-20 71.8 0.2 6.4e-20 71.5 0.2 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|15922398|ref|NP_378067.1| - 2.7e-16 59.7 0.2 3e-16 59.5 0.2 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|15922398|ref|NP_378067.1| - 1.2e-13 51.2 0.9 1.8e-13 50.7 0.9 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_4 PF13420.7 gi|15922398|ref|NP_378067.1| - 2.1e-09 37.7 0.5 2.4e-09 37.5 0.5 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|15922398|ref|NP_378067.1| - 2.4e-09 37.0 0.1 3.9e-09 36.4 0.1 1.3 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_9 PF13527.7 gi|15922398|ref|NP_378067.1| - 2.5e-06 27.6 0.0 0.00011 22.3 0.0 2.1 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain GNAT_acetyltr_2 PF13718.6 gi|15922398|ref|NP_378067.1| - 0.005 16.3 0.1 0.044 13.2 0.0 1.9 1 1 1 2 2 2 1 GNAT acetyltransferase 2 PanZ PF12568.8 gi|15922398|ref|NP_378067.1| - 0.16 11.7 0.0 0.23 11.2 0.0 1.3 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain, PanZ eRF1_1 PF03463.15 gi|15922399|ref|NP_378068.1| - 1.8e-24 86.2 1.2 1.8e-24 86.2 1.2 1.8 2 0 0 2 2 2 1 eRF1 domain 1 eRF1_3 PF03465.15 gi|15922399|ref|NP_378068.1| - 8.1e-24 84.3 2.7 2.2e-23 82.9 0.9 2.3 2 0 0 2 2 2 1 eRF1 domain 3 baeRF_family2 PF18844.1 gi|15922399|ref|NP_378068.1| - 0.00016 21.8 0.0 0.00026 21.1 0.0 1.4 1 0 0 1 1 1 1 Bacterial archaeo-eukaryotic release factor family 2 eRF1_2 PF03464.15 gi|15922399|ref|NP_378068.1| - 0.0021 18.3 0.0 0.0058 17.0 0.0 1.9 1 0 0 1 1 1 1 eRF1 domain 2 Resolvase PF00239.21 gi|15922399|ref|NP_378068.1| - 0.012 15.7 0.1 0.12 12.5 0.0 2.4 2 0 0 2 2 2 0 Resolvase, N terminal domain DsbG_N PF18257.1 gi|15922399|ref|NP_378068.1| - 0.17 12.0 1.8 12 6.2 0.2 2.5 2 0 0 2 2 2 0 Disulfide isomerase DsbG N-terminal MCM6_C PF18263.1 gi|15922399|ref|NP_378068.1| - 3.8 7.8 10.4 1.5 9.1 3.4 2.7 2 1 0 2 2 2 0 MCM6 C-terminal winged-helix domain Radical_SAM PF04055.21 gi|15922400|ref|NP_378069.1| - 1.9e-12 47.9 0.3 1.5e-07 31.9 0.0 3.1 2 1 1 3 3 3 2 Radical SAM superfamily Fer4_12 PF13353.6 gi|15922400|ref|NP_378069.1| - 0.0028 17.9 0.0 0.0065 16.7 0.0 1.6 1 0 0 1 1 1 1 4Fe-4S single cluster domain Neugrin PF06413.11 gi|15922400|ref|NP_378069.1| - 0.14 12.2 0.0 0.21 11.5 0.0 1.2 1 0 0 1 1 1 0 Neugrin DUF1122 PF06557.11 gi|15922401|ref|NP_378070.1| - 1e-66 223.7 2.2 1.3e-66 223.4 2.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1122) NTP_transf_2 PF01909.23 gi|15922402|ref|NP_378071.1| - 7.4e-09 35.8 0.1 1.3e-08 35.1 0.1 1.6 1 1 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|15922402|ref|NP_378071.1| - 3.1e-06 27.2 1.5 9.4e-06 25.6 0.3 2.3 2 1 0 2 2 2 1 Polymerase beta, Nucleotidyltransferase Peptidase_M50 PF02163.22 gi|15922403|ref|NP_378072.1| - 5.7e-18 65.1 4.2 1.2e-17 64.1 4.2 1.5 1 1 0 1 1 1 1 Peptidase family M50 PDZ_2 PF13180.6 gi|15922403|ref|NP_378072.1| - 0.0052 17.1 0.0 0.014 15.7 0.0 1.7 2 0 0 2 2 2 1 PDZ domain tRNA-synt_2 PF00152.20 gi|15922404|ref|NP_378073.1| - 2.9e-82 276.3 0.1 3.5e-82 276.0 0.1 1.1 1 0 0 1 1 1 1 tRNA synthetases class II (D, K and N) tRNA_anti-codon PF01336.25 gi|15922404|ref|NP_378073.1| - 2.2e-11 43.6 0.4 4.1e-11 42.7 0.4 1.5 1 0 0 1 1 1 1 OB-fold nucleic acid binding domain tRNA-synt_2d PF01409.20 gi|15922404|ref|NP_378073.1| - 8.5e-08 32.0 0.7 1.3e-05 24.8 0.3 2.3 2 0 0 2 2 2 2 tRNA synthetases class II core domain (F) HTH_3 PF01381.22 gi|15922405|ref|NP_378074.1| - 1e-16 60.7 0.1 2.5e-16 59.5 0.1 1.7 1 0 0 1 1 1 1 Helix-turn-helix HTH_19 PF12844.7 gi|15922405|ref|NP_378074.1| - 2.3e-12 46.7 6.3 4.4e-12 45.8 0.0 3.3 4 0 0 4 4 4 1 Helix-turn-helix domain HTH_26 PF13443.6 gi|15922405|ref|NP_378074.1| - 1.9e-10 41.0 0.0 5.1e-10 39.6 0.0 1.7 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_31 PF13560.6 gi|15922405|ref|NP_378074.1| - 4.1e-09 36.7 0.0 9.3e-09 35.5 0.0 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_25 PF13413.6 gi|15922405|ref|NP_378074.1| - 0.00015 21.5 0.0 0.00047 20.0 0.0 1.9 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.6 gi|15922405|ref|NP_378074.1| - 0.00033 20.5 0.0 0.0009 19.1 0.0 1.7 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_psq PF05225.16 gi|15922405|ref|NP_378074.1| - 0.0034 17.1 0.0 0.013 15.2 0.0 1.9 2 0 0 2 2 2 1 helix-turn-helix, Psq domain HTH_24 PF13412.6 gi|15922405|ref|NP_378074.1| - 0.0041 16.6 0.0 0.0087 15.6 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_35 PF13693.6 gi|15922405|ref|NP_378074.1| - 0.0085 16.1 0.1 0.024 14.7 0.1 1.7 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_7 PF02796.15 gi|15922405|ref|NP_378074.1| - 0.022 14.8 0.1 0.052 13.6 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase HTH_10 PF04967.12 gi|15922405|ref|NP_378074.1| - 0.036 13.9 0.1 0.13 12.0 0.0 2.0 2 0 0 2 2 2 0 HTH DNA binding domain LysM PF01476.20 gi|15922405|ref|NP_378074.1| - 0.04 14.0 1.8 0.75 9.9 0.0 2.8 2 1 1 3 3 2 0 LysM domain MarR PF01047.22 gi|15922405|ref|NP_378074.1| - 0.078 12.9 0.0 0.23 11.4 0.0 1.8 1 0 0 1 1 1 0 MarR family Bin3 PF06859.12 gi|15922405|ref|NP_378074.1| - 0.12 13.0 0.1 0.56 10.9 0.0 2.1 2 0 0 2 2 2 0 Bicoid-interacting protein 3 (Bin3) CENP-B_N PF04218.13 gi|15922405|ref|NP_378074.1| - 0.14 11.8 0.5 1.1 8.9 0.2 2.4 2 0 0 2 2 2 0 CENP-B N-terminal DNA-binding domain EamA PF00892.20 gi|15922407|ref|NP_378076.1| - 2e-36 125.2 52.6 4.9e-21 75.3 26.8 2.0 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 gi|15922407|ref|NP_378076.1| - 3.8e-08 33.0 23.6 8.5e-05 22.0 10.4 2.1 1 1 1 2 2 2 2 Triose-phosphate Transporter family Psm4 PF17063.5 gi|15922407|ref|NP_378076.1| - 1.5 9.6 8.2 0.82 10.4 3.8 3.1 2 0 0 2 2 2 0 Phenol-soluble modulin alpha 4 peptide DUF2582 PF10771.9 gi|15922409|ref|NP_378078.1| - 0.0033 17.5 0.0 0.0035 17.4 0.0 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix domain (DUF2582) Clostridium_P47 PF06597.11 gi|15922409|ref|NP_378078.1| - 0.063 12.0 0.1 0.063 12.0 0.1 1.0 1 0 0 1 1 1 0 Clostridium P-47 protein HTH_9 PF08221.11 gi|15922409|ref|NP_378078.1| - 0.077 13.1 0.0 0.094 12.8 0.0 1.1 1 0 0 1 1 1 0 RNA polymerase III subunit RPC82 helix-turn-helix domain DUF72 PF01904.18 gi|15922411|ref|NP_378080.1| - 4.5e-24 85.8 1.6 5.5e-24 85.5 1.6 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF72 Flavodoxin_2 PF02525.17 gi|15922411|ref|NP_378080.1| - 0.0048 16.6 0.3 0.0084 15.8 0.3 1.4 1 1 0 1 1 1 1 Flavodoxin-like fold Speriolin_C PF15059.6 gi|15922411|ref|NP_378080.1| - 0.031 14.4 2.0 0.1 12.8 1.6 1.8 1 1 1 2 2 2 0 Speriolin C-terminus Caprin-1_dimer PF18293.1 gi|15922411|ref|NP_378080.1| - 0.045 14.2 1.4 1.2 9.6 0.9 2.9 2 1 0 2 2 2 0 Caprin-1 dimerization domain HTH_Tnp_1 PF01527.20 gi|15922411|ref|NP_378080.1| - 0.067 13.5 0.1 0.14 12.4 0.1 1.5 1 0 0 1 1 1 0 Transposase BatD PF13584.6 gi|15922412|ref|NP_378081.1| - 0.12 11.2 0.0 0.15 10.8 0.0 1.2 1 0 0 1 1 1 0 Oxygen tolerance TusA PF01206.17 gi|15922413|ref|NP_378082.1| - 1.1e-19 70.0 0.1 1.3e-19 69.8 0.1 1.1 1 0 0 1 1 1 1 Sulfurtransferase TusA DUF2249 PF10006.9 gi|15922413|ref|NP_378082.1| - 2.4e-06 27.3 0.0 3.3e-06 26.9 0.0 1.3 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2249) DUF1930 PF09122.10 gi|15922413|ref|NP_378082.1| - 0.0052 16.7 0.0 0.0067 16.4 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF1930) Ldh_2 PF02615.14 gi|15922415|ref|NP_378084.1| - 7.6e-63 212.7 0.0 1.4e-62 211.8 0.0 1.4 1 1 0 1 1 1 1 Malate/L-lactate dehydrogenase RIFIN PF02009.16 gi|15922416|ref|NP_378085.1| - 0.83 9.5 16.2 0.015 15.2 8.7 2.0 2 0 0 2 2 2 0 Rifin Stevor PF17410.2 gi|15922416|ref|NP_378085.1| - 3.8 7.0 14.5 0.61 9.6 9.7 2.1 2 0 0 2 2 2 0 Subtelomeric Variable Open Reading frame TMEM154 PF15102.6 gi|15922416|ref|NP_378085.1| - 8 6.4 22.6 0.37 10.7 16.5 2.0 2 0 0 2 2 2 0 TMEM154 protein family Sigma70_r4_2 PF08281.12 gi|15922417|ref|NP_378086.1| - 0.00077 19.1 0.1 0.0015 18.2 0.1 1.5 1 0 0 1 1 1 1 Sigma-70, region 4 HTH_3 PF01381.22 gi|15922417|ref|NP_378086.1| - 0.00095 19.2 0.8 0.0014 18.6 0.8 1.4 1 0 0 1 1 1 1 Helix-turn-helix HTH_23 PF13384.6 gi|15922417|ref|NP_378086.1| - 0.00098 18.8 0.1 0.0017 18.1 0.1 1.3 1 0 0 1 1 1 1 Homeodomain-like domain HTH_37 PF13744.6 gi|15922417|ref|NP_378086.1| - 0.0023 17.8 0.0 0.0038 17.2 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_24 PF13412.6 gi|15922417|ref|NP_378086.1| - 0.0044 16.6 0.0 0.0078 15.7 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_19 PF12844.7 gi|15922417|ref|NP_378086.1| - 0.0048 16.9 0.5 0.0093 16.0 0.5 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain USP7_C2 PF14533.6 gi|15922417|ref|NP_378086.1| - 0.013 15.3 0.1 0.029 14.1 0.1 1.5 1 1 1 2 2 2 0 Ubiquitin-specific protease C-terminal Sigma70_r4 PF04545.16 gi|15922417|ref|NP_378086.1| - 0.014 14.9 0.0 0.024 14.1 0.0 1.4 1 0 0 1 1 1 0 Sigma-70, region 4 DivIVA PF05103.13 gi|15922417|ref|NP_378086.1| - 0.026 14.6 0.1 0.037 14.1 0.1 1.1 1 0 0 1 1 1 0 DivIVA protein GerE PF00196.19 gi|15922417|ref|NP_378086.1| - 0.027 14.0 0.0 0.046 13.3 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, luxR family TnsD PF15978.5 gi|15922417|ref|NP_378086.1| - 0.037 13.0 0.0 0.037 13.0 0.0 1.1 1 0 0 1 1 1 0 Tn7-like transposition protein D YdaS_antitoxin PF15943.5 gi|15922417|ref|NP_378086.1| - 0.047 13.6 0.0 0.081 12.8 0.0 1.4 1 0 0 1 1 1 0 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT HTH_7 PF02796.15 gi|15922417|ref|NP_378086.1| - 0.048 13.7 0.1 0.11 12.6 0.1 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain of resolvase DUF2802 PF10975.8 gi|15922417|ref|NP_378086.1| - 0.057 13.6 0.0 0.11 12.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF2802) UPF0175 PF03683.13 gi|15922417|ref|NP_378086.1| - 0.075 12.7 0.0 0.18 11.5 0.0 1.6 2 0 0 2 2 1 0 Uncharacterised protein family (UPF0175) Acetyltransf_1 PF00583.25 gi|15922418|ref|NP_378087.1| - 3.9e-17 62.6 0.1 5e-17 62.2 0.1 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|15922418|ref|NP_378087.1| - 1.6e-12 47.4 0.1 2.1e-12 47.1 0.1 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|15922418|ref|NP_378087.1| - 2.5e-12 47.6 0.0 3.1e-12 47.4 0.0 1.1 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|15922418|ref|NP_378087.1| - 5.8e-10 39.5 0.3 1.2e-09 38.4 0.3 1.5 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|15922418|ref|NP_378087.1| - 2.5e-07 30.8 0.1 0.0001 22.4 0.1 2.2 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain FR47 PF08445.10 gi|15922418|ref|NP_378087.1| - 2.5e-06 27.4 0.0 7.5e-06 25.8 0.0 1.8 1 1 1 2 2 2 1 FR47-like protein Acetyltransf_4 PF13420.7 gi|15922418|ref|NP_378087.1| - 7.5e-06 26.2 0.1 1.2e-05 25.5 0.1 1.3 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_CG PF14542.6 gi|15922418|ref|NP_378087.1| - 0.00077 19.5 0.1 0.0018 18.3 0.0 1.7 2 0 0 2 2 2 1 GCN5-related N-acetyl-transferase GNAT_acetyltran PF12746.7 gi|15922418|ref|NP_378087.1| - 0.017 14.7 0.0 0.024 14.2 0.0 1.2 1 0 0 1 1 1 0 GNAT acetyltransferase Acetyltransf_6 PF13480.7 gi|15922418|ref|NP_378087.1| - 0.018 15.2 0.0 0.033 14.3 0.0 1.5 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|15922418|ref|NP_378087.1| - 0.025 14.3 0.0 6 6.5 0.0 2.1 1 1 1 2 2 2 0 Acetyltransferase (GNAT) domain Myb_DNA-binding PF00249.31 gi|15922418|ref|NP_378087.1| - 0.15 12.3 0.0 2.6 8.3 0.0 2.6 3 0 0 3 3 3 0 Myb-like DNA-binding domain 3HCDH_N PF02737.18 gi|15922419|ref|NP_378088.1| - 7.6e-66 221.4 0.3 1.1e-65 220.8 0.3 1.2 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 gi|15922419|ref|NP_378088.1| - 1.4e-49 166.7 0.1 8.6e-25 87.2 0.0 2.9 3 0 0 3 3 3 2 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain UDPG_MGDP_dh_N PF03721.14 gi|15922419|ref|NP_378088.1| - 0.001 18.7 0.1 0.0017 18.0 0.1 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain NAD_binding_2 PF03446.15 gi|15922419|ref|NP_378088.1| - 0.005 17.0 0.1 0.013 15.7 0.1 1.7 1 1 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase Pyr_redox_2 PF07992.14 gi|15922419|ref|NP_378088.1| - 0.008 15.5 0.0 0.013 14.8 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase ThiF PF00899.21 gi|15922419|ref|NP_378088.1| - 0.012 14.9 0.9 0.29 10.5 1.3 2.2 2 0 0 2 2 2 0 ThiF family AlaDh_PNT_C PF01262.21 gi|15922419|ref|NP_378088.1| - 0.045 13.0 0.1 0.1 11.9 0.1 1.6 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox PF00070.27 gi|15922419|ref|NP_378088.1| - 0.15 12.7 0.2 0.39 11.3 0.2 1.7 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase AMP-binding_C_2 PF14535.6 gi|15922420|ref|NP_378089.1| - 6.7e-17 61.6 0.0 1.1e-16 60.9 0.0 1.4 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain AMP-binding PF00501.28 gi|15922420|ref|NP_378089.1| - 0.00021 20.0 0.1 0.00045 18.9 0.1 1.5 1 1 0 1 1 1 1 AMP-binding enzyme 7kD_DNA_binding PF02294.18 gi|15922421|ref|NP_378090.1| - 1.8e-41 140.0 3.7 2e-41 139.8 3.7 1.0 1 0 0 1 1 1 1 7kD DNA-binding domain B12-binding PF02310.19 gi|15922422|ref|NP_378091.1| - 1.3e-23 83.3 0.5 1.6e-23 83.0 0.5 1.1 1 0 0 1 1 1 1 B12 binding domain TPP_enzyme_N PF02776.18 gi|15922422|ref|NP_378091.1| - 0.012 15.3 0.1 2.9 7.5 0.0 2.7 3 0 0 3 3 3 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Nitro_FeMo-Co PF02579.17 gi|15922422|ref|NP_378091.1| - 0.02 15.2 0.7 12 6.3 0.0 2.8 2 1 1 3 3 3 0 Dinitrogenase iron-molybdenum cofactor IMPDH PF00478.25 gi|15922422|ref|NP_378091.1| - 0.026 13.5 0.1 0.032 13.2 0.1 1.2 1 0 0 1 1 1 0 IMP dehydrogenase / GMP reductase domain ADH_zinc_N PF00107.26 gi|15922422|ref|NP_378091.1| - 0.038 14.0 0.0 1 9.4 0.0 2.1 1 1 1 2 2 2 0 Zinc-binding dehydrogenase Radical_SAM PF04055.21 gi|15922422|ref|NP_378091.1| - 0.085 13.2 0.1 0.36 11.2 0.0 1.7 1 1 1 2 2 2 0 Radical SAM superfamily MeaB PF03308.16 gi|15922423|ref|NP_378092.1| - 5.5e-59 199.3 5.2 6.5e-59 199.1 5.2 1.1 1 0 0 1 1 1 1 Methylmalonyl Co-A mutase-associated GTPase MeaB cobW PF02492.19 gi|15922423|ref|NP_378092.1| - 0.00087 18.9 1.6 0.002 17.8 0.1 2.0 2 0 0 2 2 2 1 CobW/HypB/UreG, nucleotide-binding domain DUF3877 PF12993.7 gi|15922423|ref|NP_378092.1| - 0.012 15.4 1.2 0.95 9.3 0.4 2.1 1 1 1 2 2 2 0 Domain of unknown function, E. rectale Gene description (DUF3877) GTP_EFTU PF00009.27 gi|15922423|ref|NP_378092.1| - 0.21 11.1 1.3 0.23 11.0 0.0 1.6 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain DUF2250 PF10007.9 gi|15922424|ref|NP_378093.1| - 1.3e-70 233.5 15.8 1.5e-37 127.6 6.4 2.0 2 0 0 2 2 2 2 Uncharacterized protein conserved in archaea (DUF2250) DUF4423 PF14394.6 gi|15922424|ref|NP_378093.1| - 9.7e-06 25.4 2.3 0.0014 18.4 0.3 2.4 2 1 0 2 2 2 2 Domain of unknown function (DUF4423) TrmB PF01978.19 gi|15922424|ref|NP_378093.1| - 0.001 18.9 2.2 0.14 12.0 0.0 3.6 3 1 0 3 3 3 1 Sugar-specific transcriptional regulator TrmB MarR PF01047.22 gi|15922424|ref|NP_378093.1| - 0.016 15.1 1.1 0.18 11.7 0.0 3.1 3 0 0 3 3 3 0 MarR family HTH_45 PF14947.6 gi|15922424|ref|NP_378093.1| - 0.019 14.9 6.2 0.072 13.1 2.5 3.0 2 2 0 2 2 2 0 Winged helix-turn-helix DUF3116 PF11313.8 gi|15922424|ref|NP_378093.1| - 0.036 13.9 4.6 1.2 9.0 0.1 3.3 1 1 2 3 3 3 0 Protein of unknown function (DUF3116) HTH_47 PF16221.5 gi|15922424|ref|NP_378093.1| - 0.092 12.3 0.6 4.4 6.9 0.1 2.6 2 0 0 2 2 2 0 winged helix-turn-helix HemN_C PF06969.16 gi|15922424|ref|NP_378093.1| - 0.18 11.9 2.0 2 8.6 0.0 3.1 3 0 0 3 3 3 0 HemN C-terminal domain HTH_20 PF12840.7 gi|15922424|ref|NP_378093.1| - 0.2 11.8 1.2 9.5 6.4 0.1 3.0 2 1 0 2 2 2 0 Helix-turn-helix domain HTH_27 PF13463.6 gi|15922424|ref|NP_378093.1| - 1.9 9.1 4.9 5.6 7.5 0.1 3.4 4 1 0 4 4 4 0 Winged helix DNA-binding domain Abhydrolase_1 PF00561.20 gi|15922425|ref|NP_378094.1| - 7.5e-17 61.8 0.2 5.1e-12 46.0 0.1 2.0 1 1 1 2 2 2 2 alpha/beta hydrolase fold Hydrolase_4 PF12146.8 gi|15922425|ref|NP_378094.1| - 4.1e-13 49.2 0.1 9.3e-10 38.2 0.1 2.3 1 1 1 2 2 2 2 Serine aminopeptidase, S33 Abhydrolase_6 PF12697.7 gi|15922425|ref|NP_378094.1| - 1e-08 36.1 0.0 1.1e-08 36.0 0.0 1.2 1 0 0 1 1 1 1 Alpha/beta hydrolase family Abhydrolase_5 PF12695.7 gi|15922425|ref|NP_378094.1| - 1.3e-06 28.3 0.0 1.9e-06 27.7 0.0 1.4 1 1 0 1 1 1 1 Alpha/beta hydrolase family Ndr PF03096.14 gi|15922425|ref|NP_378094.1| - 1.2e-05 24.2 0.2 9.1e-05 21.3 0.1 1.9 1 1 1 2 2 2 1 Ndr family Abhydrolase_4 PF08386.10 gi|15922425|ref|NP_378094.1| - 0.0052 16.9 0.0 0.0096 16.0 0.0 1.4 1 0 0 1 1 1 1 TAP-like protein DLH PF01738.18 gi|15922425|ref|NP_378094.1| - 0.05 13.2 0.0 0.071 12.6 0.0 1.3 1 0 0 1 1 1 0 Dienelactone hydrolase family DUF915 PF06028.11 gi|15922425|ref|NP_378094.1| - 0.055 12.8 0.0 0.096 12.0 0.0 1.4 1 0 0 1 1 1 0 Alpha/beta hydrolase of unknown function (DUF915) FSH1 PF03959.13 gi|15922425|ref|NP_378094.1| - 0.1 12.2 0.0 0.14 11.8 0.0 1.4 1 0 0 1 1 1 0 Serine hydrolase (FSH1) Esterase PF00756.20 gi|15922425|ref|NP_378094.1| - 0.18 11.4 0.0 0.26 10.9 0.0 1.4 1 0 0 1 1 1 0 Putative esterase PEPcase_2 PF14010.6 gi|15922427|ref|NP_378096.1| - 1.9e-218 726.0 4.7 2.1e-218 725.8 4.7 1.0 1 0 0 1 1 1 1 Phosphoenolpyruvate carboxylase DASH_Dad1 PF08649.10 gi|15922427|ref|NP_378096.1| - 0.14 12.4 0.6 0.43 10.8 0.6 1.9 1 0 0 1 1 1 0 DASH complex subunit Dad1 AhpC-TSA PF00578.21 gi|15922428|ref|NP_378097.1| - 2.8e-44 150.0 0.1 3.4e-44 149.7 0.1 1.1 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|15922428|ref|NP_378097.1| - 3.8e-26 91.6 0.0 4.4e-26 91.4 0.0 1.0 1 0 0 1 1 1 1 Redoxin Thioredoxin_8 PF13905.6 gi|15922428|ref|NP_378097.1| - 1.4e-06 28.5 0.0 2.2e-06 27.9 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin-like AhpC-TSA_2 PF13911.6 gi|15922428|ref|NP_378097.1| - 0.00027 21.0 0.1 0.00047 20.3 0.1 1.4 1 1 0 1 1 1 1 AhpC/TSA antioxidant enzyme AAA_9 PF12781.7 gi|15922428|ref|NP_378097.1| - 0.021 13.9 0.1 0.036 13.2 0.1 1.4 1 1 0 1 1 1 0 ATP-binding dynein motor region DsbG_N PF18257.1 gi|15922428|ref|NP_378097.1| - 0.029 14.5 0.3 0.066 13.3 0.3 1.6 1 1 0 1 1 1 0 Disulfide isomerase DsbG N-terminal TPR_1 PF00515.28 gi|15922428|ref|NP_378097.1| - 0.16 11.9 0.7 0.31 10.9 0.7 1.5 1 0 0 1 1 1 0 Tetratricopeptide repeat Carb_kinase PF01256.17 gi|15922429|ref|NP_378098.1| - 1.9e-53 181.5 0.0 2.5e-53 181.0 0.0 1.2 1 0 0 1 1 1 1 Carbohydrate kinase YjeF_N PF03853.15 gi|15922429|ref|NP_378098.1| - 3.9e-41 140.8 0.0 1.1e-40 139.3 0.0 1.8 1 0 0 1 1 1 1 YjeF-related protein N-terminus HK PF02110.15 gi|15922429|ref|NP_378098.1| - 1e-08 34.9 0.1 6.6e-07 29.0 0.0 2.2 2 0 0 2 2 2 1 Hydroxyethylthiazole kinase family Phos_pyr_kin PF08543.12 gi|15922429|ref|NP_378098.1| - 0.001 18.5 0.0 0.0018 17.7 0.0 1.3 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase SIS PF01380.22 gi|15922429|ref|NP_378098.1| - 0.085 12.7 0.0 0.77 9.6 0.0 2.3 2 0 0 2 2 2 0 SIS domain DUF498 PF04430.14 gi|15922429|ref|NP_378098.1| - 0.09 12.8 0.0 5.4 7.1 0.0 2.8 2 1 0 2 2 2 0 Protein of unknown function (DUF498/DUF598) Blo-t-5 PF11642.8 gi|15922430|ref|NP_378099.1| - 0.0084 16.1 9.0 0.015 15.2 7.4 2.2 1 1 1 2 2 2 2 Mite allergen Blo t 5 Peptidase_C13 PF01650.18 gi|15922430|ref|NP_378099.1| - 0.0085 15.6 0.7 0.14 11.6 0.2 2.1 1 1 1 2 2 2 1 Peptidase C13 family 7TMR-HDED PF07697.11 gi|15922430|ref|NP_378099.1| - 0.037 14.2 1.4 0.044 13.9 1.4 1.1 1 0 0 1 1 1 0 7TM-HD extracellular Thioredoxin_14 PF18402.1 gi|15922430|ref|NP_378099.1| - 0.052 13.5 2.5 0.062 13.2 2.5 1.2 1 0 0 1 1 1 0 Thioredoxin-like domain TPR_2 PF07719.17 gi|15922430|ref|NP_378099.1| - 0.085 13.0 2.1 1.3 9.3 0.3 2.6 2 0 0 2 2 2 0 Tetratricopeptide repeat TED PF08341.11 gi|15922430|ref|NP_378099.1| - 0.09 13.2 0.2 0.1 12.9 0.2 1.2 1 0 0 1 1 1 0 Thioester domain TPR_8 PF13181.6 gi|15922430|ref|NP_378099.1| - 0.6 10.5 5.9 2.4 8.6 0.3 3.1 2 1 1 3 3 3 0 Tetratricopeptide repeat FliL PF03748.14 gi|15922430|ref|NP_378099.1| - 1.1 9.9 7.2 9.9 6.8 1.5 2.2 1 1 1 2 2 2 0 Flagellar basal body-associated protein FliL Phage_CII PF05269.11 gi|15922431|ref|NP_378100.1| - 0.00014 22.0 0.1 0.55 10.5 0.0 2.2 1 1 1 2 2 2 2 Bacteriophage CII protein DUF2024 PF09630.10 gi|15922431|ref|NP_378100.1| - 0.0016 18.3 1.7 0.87 9.5 0.1 2.1 2 0 0 2 2 2 2 Domain of unknown function (DUF2024) Rubrerythrin PF02915.17 gi|15922431|ref|NP_378100.1| - 0.0096 16.3 11.7 0.6 10.5 11.8 2.1 1 1 0 1 1 1 1 Rubrerythrin DUF892 PF05974.12 gi|15922431|ref|NP_378100.1| - 0.022 14.8 11.1 0.34 10.9 1.5 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF892) CPSase_L_D3 PF02787.19 gi|15922431|ref|NP_378100.1| - 0.059 13.7 3.5 2 8.8 0.5 2.1 1 1 1 2 2 2 0 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AviRa PF11599.8 gi|15922431|ref|NP_378100.1| - 0.071 12.6 2.3 0.076 12.5 1.3 1.5 1 1 1 2 2 2 0 RRNA methyltransferase AviRa HTH_30 PF13556.6 gi|15922431|ref|NP_378100.1| - 0.12 12.2 2.5 5.6 6.9 0.1 2.6 3 0 0 3 3 3 0 PucR C-terminal helix-turn-helix domain Fz PF01392.22 gi|15922431|ref|NP_378100.1| - 0.12 12.9 0.3 15 6.2 0.0 2.1 1 1 1 2 2 2 0 Fz domain Alpha_Helical PF18489.1 gi|15922431|ref|NP_378100.1| - 0.13 12.5 1.5 0.23 11.7 0.9 1.7 1 1 1 2 2 2 0 Alpha helical domain UvrD-helicase PF00580.21 gi|15922431|ref|NP_378100.1| - 0.24 10.9 2.8 1.2 8.6 2.8 1.8 1 1 0 1 1 1 0 UvrD/REP helicase N-terminal domain DUF87 PF01935.17 gi|15922432|ref|NP_378101.1| - 2.8e-45 155.2 4.8 4.5e-45 154.5 4.8 1.3 1 0 0 1 1 1 1 Helicase HerA, central domain DUF853 PF05872.12 gi|15922432|ref|NP_378101.1| - 3.1e-12 45.9 0.0 4.8e-07 28.8 0.0 2.2 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) HAS-barrel PF09378.10 gi|15922432|ref|NP_378101.1| - 3.1e-10 40.0 0.3 1.5e-09 37.9 0.1 2.3 2 0 0 2 2 2 1 HAS barrel domain FtsK_SpoIIIE PF01580.18 gi|15922432|ref|NP_378101.1| - 3.1e-05 23.5 0.2 0.015 14.7 0.0 2.5 2 0 0 2 2 2 2 FtsK/SpoIIIE family AAA_10 PF12846.7 gi|15922432|ref|NP_378101.1| - 0.00019 20.5 1.2 0.0085 15.1 1.2 2.4 1 1 0 1 1 1 1 AAA-like domain TrwB_AAD_bind PF10412.9 gi|15922432|ref|NP_378101.1| - 0.00024 20.1 0.0 0.0014 17.7 0.0 1.9 2 0 0 2 2 2 1 Type IV secretion-system coupling protein DNA-binding domain ResIII PF04851.15 gi|15922432|ref|NP_378101.1| - 0.0019 18.2 2.6 0.36 10.8 2.6 2.8 1 1 0 1 1 1 1 Type III restriction enzyme, res subunit DUF658 PF04936.12 gi|15922432|ref|NP_378101.1| - 0.0045 16.8 3.3 0.011 15.5 3.3 1.6 1 0 0 1 1 1 1 Protein of unknown function (DUF658) DAP3 PF10236.9 gi|15922432|ref|NP_378101.1| - 0.012 14.8 0.4 0.062 12.5 0.4 2.0 1 1 1 2 2 2 0 Mitochondrial ribosomal death-associated protein 3 DEAD PF00270.29 gi|15922432|ref|NP_378101.1| - 0.014 15.1 2.8 1.5 8.5 0.1 3.5 2 1 1 3 3 3 0 DEAD/DEAH box helicase ComX PF05952.12 gi|15922432|ref|NP_378101.1| - 0.038 13.9 0.7 12 5.9 0.0 3.3 3 0 0 3 3 3 0 Bacillus competence pheromone ComX GatB_Yqey PF02637.18 gi|15922432|ref|NP_378101.1| - 0.063 13.2 2.7 0.16 11.8 1.9 2.2 1 1 1 2 2 2 0 GatB domain ABC_tran PF00005.27 gi|15922432|ref|NP_378101.1| - 0.09 13.3 0.0 0.18 12.3 0.0 1.5 1 0 0 1 1 1 0 ABC transporter DNA_Packaging PF11053.8 gi|15922432|ref|NP_378101.1| - 0.12 12.2 0.0 0.26 11.1 0.0 1.6 1 0 0 1 1 1 0 Terminase DNA packaging enzyme AAA_22 PF13401.6 gi|15922432|ref|NP_378101.1| - 0.13 12.5 0.8 20 5.4 0.8 3.1 1 1 0 1 1 1 0 AAA domain LPD39 PF18858.1 gi|15922432|ref|NP_378101.1| - 0.27 11.3 1.9 0.28 11.2 0.5 1.7 2 0 0 2 2 2 0 Large polyvalent protein associated domain 39 Metallophos PF00149.28 gi|15922433|ref|NP_378102.1| - 3.7e-12 47.2 1.8 5.9e-12 46.5 1.8 1.6 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|15922433|ref|NP_378102.1| - 1.2e-11 45.1 0.0 3.5e-11 43.6 0.0 2.1 1 1 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain DUF2326 PF10088.9 gi|15922433|ref|NP_378102.1| - 0.07 12.9 0.6 0.62 9.8 0.1 2.3 2 0 0 2 2 2 0 Uncharacterised protein conserved in bacteria (DUF2326) AAA_23 PF13476.6 gi|15922434|ref|NP_378103.1| - 1.4e-21 77.9 20.5 1.4e-21 77.9 20.5 7.8 1 1 5 7 7 3 1 AAA domain SMC_N PF02463.19 gi|15922434|ref|NP_378103.1| - 6.4e-14 51.9 0.5 6.4e-14 51.9 0.5 2.9 2 1 0 2 2 1 1 RecF/RecN/SMC N terminal domain Rad50_zn_hook PF04423.14 gi|15922434|ref|NP_378103.1| - 8.9e-14 51.1 1.1 8.9e-14 51.1 1.1 10.4 11 1 0 11 11 11 1 Rad50 zinc hook motif AAA_15 PF13175.6 gi|15922434|ref|NP_378103.1| - 5e-13 49.5 60.1 6.4e-08 32.7 45.9 4.2 1 1 3 4 4 2 2 AAA ATPase domain AAA_21 PF13304.6 gi|15922434|ref|NP_378103.1| - 1.4e-07 31.7 42.7 0.00011 22.2 11.5 4.5 1 1 1 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system AAA_13 PF13166.6 gi|15922434|ref|NP_378103.1| - 3.7e-07 29.2 5.0 3.7e-07 29.2 5.0 6.0 1 1 6 7 7 6 5 AAA domain AAA_29 PF13555.6 gi|15922434|ref|NP_378103.1| - 1.4e-06 28.0 0.0 2.9e-06 26.9 0.0 1.5 1 0 0 1 1 1 1 P-loop containing region of AAA domain ABC_tran PF00005.27 gi|15922434|ref|NP_378103.1| - 7.2e-06 26.6 0.2 7.2e-06 26.6 0.2 6.4 2 1 1 3 3 1 1 ABC transporter DUF3584 PF12128.8 gi|15922434|ref|NP_378103.1| - 6.8e-05 20.6 26.7 6.8e-05 20.6 26.7 3.9 1 1 3 4 4 3 3 Protein of unknown function (DUF3584) SbcCD_C PF13558.6 gi|15922434|ref|NP_378103.1| - 0.00051 20.2 0.0 0.0014 18.8 0.0 1.8 1 0 0 1 1 1 1 Putative exonuclease SbcCD, C subunit AAA_27 PF13514.6 gi|15922434|ref|NP_378103.1| - 0.0018 17.9 0.0 0.0018 17.9 0.0 4.9 5 2 3 8 8 8 1 AAA domain CENP-F_leu_zip PF10473.9 gi|15922434|ref|NP_378103.1| - 0.011 15.8 23.3 0.011 15.8 23.3 7.0 2 2 5 7 7 3 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DASH_Hsk3 PF08227.11 gi|15922434|ref|NP_378103.1| - 0.036 14.4 5.5 23 5.4 0.1 4.6 4 0 0 4 4 3 0 DASH complex subunit Hsk3 like RsgA_GTPase PF03193.16 gi|15922434|ref|NP_378103.1| - 0.047 13.6 0.0 0.047 13.6 0.0 4.5 4 3 1 5 5 5 0 RsgA GTPase NurA PF09376.10 gi|15922435|ref|NP_378104.1| - 3e-39 135.2 2.3 4.3e-39 134.7 2.3 1.2 1 0 0 1 1 1 1 NurA domain Cation_efflux PF01545.21 gi|15922436|ref|NP_378105.1| - 3.3e-09 36.8 29.7 4.3e-09 36.4 29.7 1.2 1 0 0 1 1 1 1 Cation efflux family ZT_dimer PF16916.5 gi|15922436|ref|NP_378105.1| - 6e-05 23.1 2.8 0.00011 22.2 2.8 1.5 1 0 0 1 1 1 1 Dimerisation domain of Zinc Transporter Methyltransf_11 PF08241.12 gi|15922437|ref|NP_378106.1| - 3.3e-08 34.1 0.0 4.9e-08 33.5 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|15922437|ref|NP_378106.1| - 0.0046 17.6 0.0 0.008 16.9 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Ubie_methyltran PF01209.18 gi|15922437|ref|NP_378106.1| - 0.026 13.8 0.0 0.054 12.8 0.0 1.5 1 1 0 1 1 1 0 ubiE/COQ5 methyltransferase family Methyltransf_23 PF13489.6 gi|15922437|ref|NP_378106.1| - 0.078 12.8 0.0 0.098 12.5 0.0 1.4 1 1 0 1 1 1 0 Methyltransferase domain CBS PF00571.28 gi|15922439|ref|NP_378108.1| - 1.9e-38 130.7 11.2 6.1e-13 49.0 0.1 4.1 4 0 0 4 4 4 4 CBS domain Ribosomal_L9_C PF03948.14 gi|15922439|ref|NP_378108.1| - 0.0073 16.8 1.4 1.3 9.6 0.0 3.7 3 1 1 4 4 4 1 Ribosomal protein L9, C-terminal domain IF3_N PF05198.16 gi|15922439|ref|NP_378108.1| - 0.07 13.4 2.1 18 5.7 0.1 3.8 2 2 2 4 4 4 0 Translation initiation factor IF-3, N-terminal domain Acetyltransf_1 PF00583.25 gi|15922439|ref|NP_378108.1| - 0.12 12.6 0.0 8.1 6.7 0.0 2.8 1 1 1 2 2 2 0 Acetyltransferase (GNAT) family Thiamine_BP PF01910.17 gi|15922440|ref|NP_378109.1| - 1.9e-26 91.8 0.1 2.1e-26 91.7 0.1 1.0 1 0 0 1 1 1 1 Thiamine-binding protein V-ATPase_H_C PF11698.8 gi|15922440|ref|NP_378109.1| - 0.022 14.9 0.0 0.027 14.6 0.0 1.1 1 0 0 1 1 1 0 V-ATPase subunit H Flavodoxin_1 PF00258.25 gi|15922440|ref|NP_378109.1| - 0.13 12.5 0.0 0.24 11.6 0.0 1.5 1 1 0 1 1 1 0 Flavodoxin FUR PF01475.19 gi|15922441|ref|NP_378110.1| - 2.2e-24 85.9 0.1 2.5e-24 85.7 0.1 1.1 1 0 0 1 1 1 1 Ferric uptake regulator family HTH_20 PF12840.7 gi|15922441|ref|NP_378110.1| - 0.00018 21.5 0.0 0.00033 20.7 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain Penicillinase_R PF03965.16 gi|15922441|ref|NP_378110.1| - 0.0011 19.3 0.0 0.0016 18.7 0.0 1.3 1 0 0 1 1 1 1 Penicillinase repressor HTH_5 PF01022.20 gi|15922441|ref|NP_378110.1| - 0.0024 17.7 0.0 0.055 13.3 0.0 2.7 1 1 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_11 PF08279.12 gi|15922441|ref|NP_378110.1| - 0.0052 16.7 0.3 0.024 14.6 0.1 2.3 2 1 0 2 2 2 1 HTH domain HxlR PF01638.17 gi|15922441|ref|NP_378110.1| - 0.014 15.3 0.0 0.028 14.3 0.0 1.5 1 0 0 1 1 1 0 HxlR-like helix-turn-helix Replic_Relax PF13814.6 gi|15922441|ref|NP_378110.1| - 0.073 13.1 0.0 0.12 12.4 0.0 1.3 1 0 0 1 1 1 0 Replication-relaxation TrmB PF01978.19 gi|15922441|ref|NP_378110.1| - 0.075 12.9 0.0 0.25 11.3 0.0 2.0 2 1 0 2 2 2 0 Sugar-specific transcriptional regulator TrmB HTH_Tnp_Tc3_2 PF01498.18 gi|15922441|ref|NP_378110.1| - 0.17 12.1 0.0 1.4 9.2 0.0 2.2 1 1 1 2 2 2 0 Transposase IU_nuc_hydro PF01156.19 gi|15922442|ref|NP_378111.1| - 4e-77 259.8 0.0 4.5e-77 259.6 0.0 1.0 1 0 0 1 1 1 1 Inosine-uridine preferring nucleoside hydrolase AAA_13 PF13166.6 gi|15922443|ref|NP_378112.1| - 4.6e-07 28.9 62.6 2.4e-05 23.2 24.1 3.0 1 1 0 2 2 2 2 AAA domain Atg14 PF10186.9 gi|15922443|ref|NP_378112.1| - 0.00012 21.3 16.9 0.00012 21.3 16.9 3.0 1 1 1 2 2 1 1 Vacuolar sorting 38 and autophagy-related subunit 14 ABC_tran_CTD PF16326.5 gi|15922443|ref|NP_378112.1| - 0.00025 21.2 75.2 0.0019 18.4 7.2 6.9 3 2 3 6 6 5 4 ABC transporter C-terminal domain Spc7 PF08317.11 gi|15922443|ref|NP_378112.1| - 0.00025 20.0 74.9 0.064 12.1 37.9 4.2 1 1 1 3 3 3 2 Spc7 kinetochore protein BLOC1_2 PF10046.9 gi|15922443|ref|NP_378112.1| - 0.00031 21.0 60.1 0.0086 16.4 9.8 5.6 3 2 2 5 5 5 2 Biogenesis of lysosome-related organelles complex-1 subunit 2 Nup54 PF13874.6 gi|15922443|ref|NP_378112.1| - 0.00054 20.1 7.3 0.00054 20.1 7.3 4.1 1 1 2 4 4 4 2 Nucleoporin complex subunit 54 DHR10 PF18595.1 gi|15922443|ref|NP_378112.1| - 0.0015 18.6 35.4 0.0015 18.6 35.4 4.4 2 2 2 4 4 4 1 Designed helical repeat protein 10 domain AAA_21 PF13304.6 gi|15922443|ref|NP_378112.1| - 0.0023 17.8 11.6 0.051 13.4 7.1 2.8 2 2 0 2 2 2 1 AAA domain, putative AbiEii toxin, Type IV TA system Seryl_tRNA_N PF02403.22 gi|15922443|ref|NP_378112.1| - 0.0087 16.3 68.1 0.041 14.1 10.5 5.1 3 1 1 4 4 4 1 Seryl-tRNA synthetase N-terminal domain Mod_r PF07200.13 gi|15922443|ref|NP_378112.1| - 0.009 16.1 11.1 0.009 16.1 11.1 4.6 1 1 2 4 4 4 1 Modifier of rudimentary (Mod(r)) protein NPV_P10 PF05531.12 gi|15922443|ref|NP_378112.1| - 0.0093 16.4 36.4 0.48 10.9 1.5 6.6 2 2 3 5 5 5 2 Nucleopolyhedrovirus P10 protein Baculo_PEP_C PF04513.12 gi|15922443|ref|NP_378112.1| - 0.013 15.5 36.4 0.41 10.7 8.2 4.9 1 1 5 6 6 6 0 Baculovirus polyhedron envelope protein, PEP, C terminus APG6_N PF17675.1 gi|15922443|ref|NP_378112.1| - 0.023 15.2 80.6 2.2 8.8 10.7 5.0 1 1 3 4 4 4 0 Apg6 coiled-coil region WXG100 PF06013.12 gi|15922443|ref|NP_378112.1| - 0.14 12.4 15.0 1.4 9.2 0.1 5.7 3 3 1 4 4 4 0 Proteins of 100 residues with WXG DUF4407 PF14362.6 gi|15922443|ref|NP_378112.1| - 0.15 11.4 45.9 1.8e+04 -11.5 45.9 3.3 1 1 0 1 1 0 0 Domain of unknown function (DUF4407) DUF1664 PF07889.12 gi|15922443|ref|NP_378112.1| - 0.16 12.0 50.1 3 7.9 8.9 5.1 2 2 3 5 5 5 0 Protein of unknown function (DUF1664) MAD PF05557.13 gi|15922443|ref|NP_378112.1| - 0.23 9.8 72.6 0.06 11.7 37.3 2.1 1 1 0 2 2 2 0 Mitotic checkpoint protein SMC_N PF02463.19 gi|15922443|ref|NP_378112.1| - 0.43 10.0 30.0 2.5 7.5 27.9 3.0 2 1 0 2 2 2 0 RecF/RecN/SMC N terminal domain GAS PF13851.6 gi|15922443|ref|NP_378112.1| - 0.52 9.6 76.3 0.25 10.7 16.3 4.4 2 2 2 4 4 4 0 Growth-arrest specific micro-tubule binding AAA_23 PF13476.6 gi|15922443|ref|NP_378112.1| - 0.78 10.2 90.3 0.16 12.5 45.4 5.0 1 1 1 2 2 1 0 AAA domain Fib_alpha PF08702.10 gi|15922443|ref|NP_378112.1| - 0.8 9.9 54.3 4.6 7.4 20.6 4.3 1 1 3 4 4 4 0 Fibrinogen alpha/beta chain family DASH_Dam1 PF08653.10 gi|15922443|ref|NP_378112.1| - 0.83 9.5 19.3 0.2 11.5 0.2 6.5 6 1 1 7 7 7 0 DASH complex subunit Dam1 Imm27 PF15590.6 gi|15922443|ref|NP_378112.1| - 1.1 9.1 8.1 2.1 8.2 0.3 4.3 4 1 0 4 4 2 0 Immunity protein 27 Filament PF00038.21 gi|15922443|ref|NP_378112.1| - 1.2 8.6 70.0 9.7 5.7 56.3 4.0 1 1 1 2 2 2 0 Intermediate filament protein Enkurin PF13864.6 gi|15922443|ref|NP_378112.1| - 3.3 8.2 58.0 1.8 9.0 9.9 5.4 3 2 2 5 5 5 0 Calmodulin-binding Syntaxin PF00804.25 gi|15922443|ref|NP_378112.1| - 3.4 7.3 58.6 0.076 12.7 16.9 5.2 1 1 1 4 4 4 0 Syntaxin LPP PF04728.13 gi|15922443|ref|NP_378112.1| - 3.7 8.0 21.5 32 5.0 0.2 6.8 5 2 1 6 6 5 0 Lipoprotein leucine-zipper Uso1_p115_C PF04871.13 gi|15922443|ref|NP_378112.1| - 3.9 7.9 60.2 0.68 10.3 8.7 4.6 3 1 0 4 4 4 0 Uso1 / p115 like vesicle tethering protein, C terminal region ATG16 PF08614.11 gi|15922443|ref|NP_378112.1| - 4.4 7.5 72.7 0.47 10.7 2.9 4.8 2 2 1 4 4 4 0 Autophagy protein 16 (ATG16) DUF948 PF06103.11 gi|15922443|ref|NP_378112.1| - 4.7 7.5 30.7 7.3 6.9 1.7 5.9 1 1 1 5 5 5 0 Bacterial protein of unknown function (DUF948) Prefoldin_2 PF01920.20 gi|15922443|ref|NP_378112.1| - 5.8 6.9 85.3 0.93 9.5 5.6 8.1 1 1 5 6 6 6 0 Prefoldin subunit FlaC_arch PF05377.11 gi|15922443|ref|NP_378112.1| - 5.9 7.4 62.9 0.16 12.4 1.4 7.6 3 3 4 7 7 7 0 Flagella accessory protein C (FlaC) CENP-F_leu_zip PF10473.9 gi|15922443|ref|NP_378112.1| - 6.8 6.7 80.4 0.8 9.7 16.5 5.0 2 2 3 5 5 5 0 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 DUF724 PF05266.14 gi|15922443|ref|NP_378112.1| - 7.1 6.4 62.7 0.12 12.2 16.6 4.4 1 1 3 4 4 4 0 Protein of unknown function (DUF724) HOOK PF05622.12 gi|15922443|ref|NP_378112.1| - 8.8 4.3 72.3 15 3.6 38.3 3.4 1 1 2 3 3 3 0 HOOK protein Tropomyosin_1 PF12718.7 gi|15922443|ref|NP_378112.1| - 9.5 6.4 73.7 1.6 8.9 22.8 4.4 1 1 2 3 3 3 0 Tropomyosin like DUF3584 PF12128.8 gi|15922443|ref|NP_378112.1| - 9.8 3.5 57.8 1.8 6.0 29.3 2.4 1 1 0 2 2 2 0 Protein of unknown function (DUF3584) TACC_C PF05010.14 gi|15922443|ref|NP_378112.1| - 9.8 5.9 67.0 0.34 10.7 32.3 3.5 1 1 3 4 4 4 0 Transforming acidic coiled-coil-containing protein (TACC), C-terminal Taxilin PF09728.9 gi|15922443|ref|NP_378112.1| - 9.9 5.2 68.4 3.8 6.6 37.6 3.4 1 1 2 3 3 3 0 Myosin-like coiled-coil protein Occludin_ELL PF07303.13 gi|15922443|ref|NP_378112.1| - 9.9 7.0 55.6 0.12 13.1 10.9 6.1 3 2 3 6 6 5 0 Occludin homology domain CBS PF00571.28 gi|15922445|ref|NP_378114.1| - 3.1e-31 107.6 7.7 4.5e-17 62.2 0.7 2.2 2 0 0 2 2 2 2 CBS domain DisA_N PF02457.16 gi|15922445|ref|NP_378114.1| - 0.0065 16.1 0.2 0.011 15.4 0.1 1.5 1 1 0 1 1 1 1 DisA bacterial checkpoint controller nucleotide-binding Rad50_zn_hook PF04423.14 gi|15922445|ref|NP_378114.1| - 0.0083 15.9 0.0 0.016 15.0 0.0 1.4 1 0 0 1 1 1 1 Rad50 zinc hook motif DUF5018 PF16410.5 gi|15922445|ref|NP_378114.1| - 0.034 12.9 1.4 0.38 9.4 1.0 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF5018) IF3_N PF05198.16 gi|15922445|ref|NP_378114.1| - 0.52 10.6 2.6 22 5.4 0.5 2.9 2 2 0 2 2 2 0 Translation initiation factor IF-3, N-terminal domain His_Phos_1 PF00300.22 gi|15922446|ref|NP_378115.1| - 5.9e-37 127.3 0.0 7e-37 127.0 0.0 1.0 1 0 0 1 1 1 1 Histidine phosphatase superfamily (branch 1) tRNA_deacylase PF04414.12 gi|15922447|ref|NP_378116.1| - 4.5e-57 192.9 0.1 5.4e-57 192.6 0.1 1.1 1 0 0 1 1 1 1 D-aminoacyl-tRNA deacylase DAO PF01266.24 gi|15922448|ref|NP_378117.1| - 1.2e-12 48.1 0.0 4.4e-11 43.0 0.0 2.1 2 0 0 2 2 2 1 FAD dependent oxidoreductase Pyr_redox_2 PF07992.14 gi|15922448|ref|NP_378117.1| - 0.001 18.4 0.4 0.0032 16.7 0.4 1.8 1 1 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase FEZ PF07763.13 gi|15922448|ref|NP_378117.1| - 0.037 13.8 0.7 0.051 13.3 0.7 1.2 1 0 0 1 1 1 0 FEZ-like protein Thioredoxin PF00085.20 gi|15922449|ref|NP_378118.1| - 4.6e-27 94.0 0.0 5.9e-27 93.7 0.0 1.1 1 0 0 1 1 1 1 Thioredoxin Thioredoxin_2 PF13098.6 gi|15922449|ref|NP_378118.1| - 1.1e-07 32.3 0.1 6e-06 26.7 0.1 2.2 1 1 0 1 1 1 1 Thioredoxin-like domain Thioredoxin_9 PF14595.6 gi|15922449|ref|NP_378118.1| - 8.9e-06 25.5 0.0 1.1e-05 25.2 0.0 1.3 1 0 0 1 1 1 1 Thioredoxin OST3_OST6 PF04756.13 gi|15922449|ref|NP_378118.1| - 1.3e-05 24.7 0.0 2e-05 24.1 0.0 1.3 1 1 0 1 1 1 1 OST3 / OST6 family, transporter family Thioredoxin_8 PF13905.6 gi|15922449|ref|NP_378118.1| - 1.6e-05 25.1 0.0 0.0047 17.2 0.0 2.4 2 1 1 3 3 3 1 Thioredoxin-like HyaE PF07449.11 gi|15922449|ref|NP_378118.1| - 0.0007 19.5 0.0 0.0014 18.6 0.0 1.6 1 1 0 1 1 1 1 Hydrogenase-1 expression protein HyaE Thioredoxin_3 PF13192.6 gi|15922449|ref|NP_378118.1| - 0.0011 19.0 0.0 0.0029 17.6 0.0 1.7 1 1 1 2 2 2 1 Thioredoxin domain AhpC-TSA PF00578.21 gi|15922449|ref|NP_378118.1| - 0.0038 17.1 0.1 0.23 11.4 0.0 2.1 1 1 1 2 2 2 1 AhpC/TSA family Phosducin PF02114.16 gi|15922449|ref|NP_378118.1| - 0.01 14.8 0.0 0.012 14.6 0.0 1.3 1 1 0 1 1 1 0 Phosducin DUF2456 PF10445.9 gi|15922449|ref|NP_378118.1| - 0.016 15.2 0.0 0.024 14.7 0.0 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2456) Redoxin PF08534.10 gi|15922449|ref|NP_378118.1| - 0.017 14.8 0.0 0.035 13.8 0.0 1.6 1 1 1 2 2 2 0 Redoxin UL11 PF11094.8 gi|15922449|ref|NP_378118.1| - 0.12 12.3 0.0 0.29 11.0 0.0 1.7 1 0 0 1 1 1 0 Membrane-associated tegument protein NTPase_I-T PF01931.18 gi|15922451|ref|NP_378120.1| - 3e-50 170.2 0.0 3.4e-50 170.0 0.0 1.0 1 0 0 1 1 1 1 Protein of unknown function DUF84 VitK2_biosynth PF02621.14 gi|15922452|ref|NP_378121.1| - 1.4e-65 221.5 0.0 1.5e-65 221.4 0.0 1.0 1 0 0 1 1 1 1 Menaquinone biosynthesis DUF1444 PF07285.11 gi|15922452|ref|NP_378121.1| - 0.027 14.0 2.3 0.2 11.2 0.5 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF1444) TrkA_N PF02254.18 gi|15922452|ref|NP_378121.1| - 1.6 9.0 5.0 0.2 12.0 0.3 1.9 3 0 0 3 3 3 0 TrkA-N domain Cytokin_check_N PF10407.9 gi|15922453|ref|NP_378122.1| - 0.0072 16.3 0.0 3.1 7.8 0.0 2.4 2 0 0 2 2 2 2 Cdc14 phosphatase binding protein N-terminus DUF1217 PF06748.12 gi|15922454|ref|NP_378123.1| - 0.0088 16.1 0.0 3.6 7.6 0.0 2.1 2 0 0 2 2 2 2 Protein of unknown function (DUF1217) EMG1 PF03587.14 gi|15922455|ref|NP_378124.1| - 1.7e-44 151.8 0.0 2e-44 151.6 0.0 1.0 1 0 0 1 1 1 1 EMG1/NEP1 methyltransferase Rpr2 PF04032.16 gi|15922456|ref|NP_378125.1| - 3.1e-11 43.4 0.2 5.1e-11 42.7 0.2 1.4 1 0 0 1 1 1 1 RNAse P Rpr2/Rpp21/SNM1 subunit domain CRS1_YhbY PF01985.21 gi|15922457|ref|NP_378126.1| - 1.4e-16 60.4 5.1 1.6e-16 60.3 5.1 1.0 1 0 0 1 1 1 1 CRS1 / YhbY (CRM) domain DUF3928 PF13065.6 gi|15922457|ref|NP_378126.1| - 0.022 15.5 0.2 0.024 15.4 0.2 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF3928) DUF775 PF05603.12 gi|15922457|ref|NP_378126.1| - 0.048 13.2 0.3 0.052 13.1 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF775) CUT PF02376.15 gi|15922457|ref|NP_378126.1| - 0.05 13.8 0.5 0.11 12.7 0.2 1.7 2 1 0 2 2 2 0 CUT domain DUF1949 PF09186.11 gi|15922457|ref|NP_378126.1| - 0.061 13.2 0.1 0.14 12.0 0.0 1.7 1 1 0 1 1 1 0 Domain of unknown function (DUF1949) HTH_Crp_2 PF13545.6 gi|15922457|ref|NP_378126.1| - 0.075 13.0 1.7 1.4 8.9 0.7 2.1 1 1 1 2 2 2 0 Crp-like helix-turn-helix domain DUF371 PF04027.13 gi|15922458|ref|NP_378127.1| - 8.3e-50 168.2 0.3 9.7e-50 168.0 0.3 1.0 1 0 0 1 1 1 1 Domain of unknown function (DUF371) TubC_N PF18563.1 gi|15922458|ref|NP_378127.1| - 0.031 14.3 0.5 0.45 10.5 0.4 2.3 2 0 0 2 2 2 0 TubC N-terminal docking domain SKA1 PF07160.12 gi|15922458|ref|NP_378127.1| - 0.044 13.6 1.3 0.055 13.3 1.3 1.1 1 0 0 1 1 1 0 Spindle and kinetochore-associated protein 1 BssC_TutF PF08201.11 gi|15922458|ref|NP_378127.1| - 0.2 11.7 0.0 0.35 10.9 0.0 1.3 1 0 0 1 1 1 0 BssC/TutF protein Met_10 PF02475.16 gi|15922459|ref|NP_378128.1| - 6.6e-28 97.8 0.0 1.2e-27 97.0 0.0 1.4 1 0 0 1 1 1 1 Met-10+ like-protein Methyltransf_25 PF13649.6 gi|15922459|ref|NP_378128.1| - 3.9e-06 27.5 0.0 6.9e-06 26.7 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|15922459|ref|NP_378128.1| - 2.7e-05 24.7 0.0 4.7e-05 24.0 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|15922459|ref|NP_378128.1| - 0.0075 15.8 0.0 0.013 15.1 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase small domain TehB PF03848.14 gi|15922459|ref|NP_378128.1| - 0.015 14.7 0.1 0.025 14.0 0.1 1.3 1 0 0 1 1 1 0 Tellurite resistance protein TehB Methyltransf_31 PF13847.6 gi|15922459|ref|NP_378128.1| - 0.17 11.7 0.1 0.37 10.6 0.1 1.6 1 1 0 1 1 1 0 Methyltransferase domain YoaP PF14268.6 gi|15922459|ref|NP_378128.1| - 0.47 10.0 4.3 0.24 10.9 0.5 2.2 2 0 0 2 2 2 0 YoaP-like Pyr_redox_2 PF07992.14 gi|15922460|ref|NP_378129.1| - 1e-33 116.8 0.7 1.3e-33 116.5 0.7 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|15922460|ref|NP_378129.1| - 6e-27 94.7 0.5 4.6e-24 85.2 0.1 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|15922460|ref|NP_378129.1| - 2e-13 50.7 0.3 2.2e-10 41.0 0.0 2.7 3 0 0 3 3 2 2 Pyridine nucleotide-disulphide oxidoreductase K_oxygenase PF13434.6 gi|15922460|ref|NP_378129.1| - 4.8e-09 35.8 0.2 1.9e-06 27.3 0.0 3.0 2 1 1 3 3 3 2 L-lysine 6-monooxygenase (NADPH-requiring) HI0933_like PF03486.14 gi|15922460|ref|NP_378129.1| - 3.2e-08 32.7 0.4 0.0012 17.7 0.1 3.5 4 0 0 4 4 4 2 HI0933-like protein NAD_binding_8 PF13450.6 gi|15922460|ref|NP_378129.1| - 1.6e-06 28.3 0.2 5.6e-05 23.3 0.1 2.4 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain FAD_oxidored PF12831.7 gi|15922460|ref|NP_378129.1| - 1.3e-05 24.7 0.5 0.00068 19.1 0.0 2.8 3 0 0 3 3 3 1 FAD dependent oxidoreductase DAO PF01266.24 gi|15922460|ref|NP_378129.1| - 0.00022 20.9 1.9 0.18 11.3 0.2 3.4 3 1 1 4 4 4 1 FAD dependent oxidoreductase FMO-like PF00743.19 gi|15922460|ref|NP_378129.1| - 0.00041 18.9 0.3 0.0014 17.2 0.0 1.8 1 1 1 2 2 2 1 Flavin-binding monooxygenase-like NAD_binding_7 PF13241.6 gi|15922460|ref|NP_378129.1| - 0.00041 20.7 3.7 0.00086 19.7 0.1 2.5 2 1 0 2 2 2 1 Putative NAD(P)-binding FAD_binding_2 PF00890.24 gi|15922460|ref|NP_378129.1| - 0.0012 18.0 0.6 1.9 7.5 0.0 3.3 3 1 0 3 3 3 1 FAD binding domain GIDA PF01134.22 gi|15922460|ref|NP_378129.1| - 0.021 13.9 1.6 25 3.8 0.1 3.8 4 0 0 4 4 4 0 Glucose inhibited division protein A Thi4 PF01946.17 gi|15922460|ref|NP_378129.1| - 0.049 12.9 2.4 0.37 10.0 0.1 2.9 2 1 0 2 2 2 0 Thi4 family Spermine_synth PF01564.17 gi|15922460|ref|NP_378129.1| - 0.051 13.0 0.1 0.14 11.5 0.1 1.7 2 0 0 2 2 2 0 Spermine/spermidine synthase domain NAD_kinase PF01513.21 gi|15922463|ref|NP_378132.1| - 3.6e-25 88.8 0.0 4.6e-25 88.4 0.0 1.1 1 0 0 1 1 1 1 ATP-NAD kinase DAGK_cat PF00781.24 gi|15922463|ref|NP_378132.1| - 0.0041 16.7 0.0 0.01 15.4 0.0 1.7 2 0 0 2 2 2 1 Diacylglycerol kinase catalytic domain Methyltransf_31 PF13847.6 gi|15922463|ref|NP_378132.1| - 0.025 14.4 0.0 0.047 13.5 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain PIN_6 PF17146.4 gi|15922464|ref|NP_378133.1| - 2.3e-20 72.9 0.2 3.5e-20 72.3 0.2 1.3 1 0 0 1 1 1 1 PIN domain of ribonuclease HypA PF01155.19 gi|15922464|ref|NP_378133.1| - 0.00041 20.4 0.5 0.00053 20.0 0.5 1.5 1 1 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA PIN PF01850.21 gi|15922464|ref|NP_378133.1| - 0.00069 20.1 0.9 0.0016 18.9 0.9 1.6 1 1 0 1 1 1 1 PIN domain DUF4073 PF13285.6 gi|15922464|ref|NP_378133.1| - 0.0087 15.7 0.1 0.013 15.1 0.1 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF4073) zf-ribbon_3 PF13248.6 gi|15922464|ref|NP_378133.1| - 0.011 15.2 2.7 0.018 14.5 2.7 1.4 1 0 0 1 1 1 0 zinc-ribbon domain C1_2 PF03107.16 gi|15922464|ref|NP_378133.1| - 0.013 15.8 0.4 0.022 15.1 0.4 1.4 1 0 0 1 1 1 0 C1 domain zinc-ribbons_6 PF07191.12 gi|15922464|ref|NP_378133.1| - 0.013 15.5 0.1 0.02 14.8 0.1 1.3 1 0 0 1 1 1 0 zinc-ribbons zf-C3HC4_3 PF13920.6 gi|15922464|ref|NP_378133.1| - 0.014 15.2 0.9 0.021 14.7 0.9 1.2 1 0 0 1 1 1 0 Zinc finger, C3HC4 type (RING finger) TF_Zn_Ribbon PF08271.12 gi|15922464|ref|NP_378133.1| - 0.015 14.8 1.5 4.1 7.0 0.1 2.4 1 1 0 2 2 2 0 TFIIB zinc-binding DZR PF12773.7 gi|15922464|ref|NP_378133.1| - 0.02 14.9 0.4 0.031 14.3 0.4 1.3 1 0 0 1 1 1 0 Double zinc ribbon Zn-ribbon_8 PF09723.10 gi|15922464|ref|NP_378133.1| - 0.027 14.6 3.2 0.053 13.6 3.2 1.5 1 0 0 1 1 1 0 Zinc ribbon domain zinc_ribbon_15 PF17032.5 gi|15922464|ref|NP_378133.1| - 0.033 14.9 3.2 0.041 14.6 3.1 1.4 1 1 0 1 1 1 0 zinc-ribbon family NOB1_Zn_bind PF08772.11 gi|15922464|ref|NP_378133.1| - 0.055 13.6 2.6 0.055 13.6 2.6 1.7 2 0 0 2 2 2 0 Nin one binding (NOB1) Zn-ribbon like zf-BED PF02892.15 gi|15922464|ref|NP_378133.1| - 0.061 13.4 5.5 0.71 9.9 5.2 2.3 1 1 0 1 1 1 0 BED zinc finger zf-C2H2 PF00096.26 gi|15922464|ref|NP_378133.1| - 0.068 13.7 5.9 0.2 12.2 2.1 2.4 2 0 0 2 2 2 0 Zinc finger, C2H2 type CpXC PF14353.6 gi|15922464|ref|NP_378133.1| - 0.11 12.5 4.2 0.55 10.3 0.1 2.9 2 2 1 3 3 3 0 CpXC protein zf-H2C2_2 PF13465.6 gi|15922464|ref|NP_378133.1| - 0.12 12.8 0.6 0.12 12.8 0.6 2.3 2 0 0 2 2 2 0 Zinc-finger double domain zf-ISL3 PF14690.6 gi|15922464|ref|NP_378133.1| - 0.15 12.8 2.5 19 6.0 0.0 3.0 3 0 0 3 3 3 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 DUF35_N PF12172.8 gi|15922464|ref|NP_378133.1| - 0.16 11.8 1.7 0.25 11.3 1.7 1.3 1 0 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zf_UBZ PF18439.1 gi|15922464|ref|NP_378133.1| - 0.24 11.0 1.0 4 7.1 0.2 2.2 1 1 1 2 2 2 0 Ubiquitin-Binding Zinc Finger Rubredoxin_2 PF18073.1 gi|15922464|ref|NP_378133.1| - 0.56 10.0 5.4 0.85 9.4 5.4 1.2 1 0 0 1 1 1 0 Rubredoxin metal binding domain zf-CHCC PF10276.9 gi|15922464|ref|NP_378133.1| - 1.3 9.2 4.3 3.3 7.8 0.8 2.2 2 0 0 2 2 2 0 Zinc-finger domain zf-C2H2_4 PF13894.6 gi|15922464|ref|NP_378133.1| - 1.3 10.1 6.4 1.5 9.8 0.9 2.5 1 1 1 2 2 2 0 C2H2-type zinc finger Zn_Tnp_IS1595 PF12760.7 gi|15922464|ref|NP_378133.1| - 2.1 8.4 6.1 20 5.3 0.2 2.3 1 1 0 2 2 2 0 Transposase zinc-ribbon domain zf-C2H2_6 PF13912.6 gi|15922464|ref|NP_378133.1| - 5.6 7.1 6.5 2.7 8.1 1.6 2.3 2 0 0 2 2 2 0 C2H2-type zinc finger AMP-binding PF00501.28 gi|15922466|ref|NP_378135.1| - 4.5e-71 239.7 0.0 5.9e-71 239.3 0.0 1.1 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|15922466|ref|NP_378135.1| - 1e-17 64.9 1.0 2e-17 63.9 1.0 1.5 1 0 0 1 1 1 1 AMP-binding enzyme C-terminal domain ACAS_N PF16177.5 gi|15922466|ref|NP_378135.1| - 1.3e-14 53.9 5.1 2.9e-14 52.7 5.1 1.7 1 0 0 1 1 1 1 Acetyl-coenzyme A synthetase N-terminus Aminotran_5 PF00266.19 gi|15922467|ref|NP_378136.1| - 1.7e-44 152.3 0.0 2.8e-44 151.6 0.0 1.3 1 1 0 1 1 1 1 Aminotransferase class-V Aminotran_1_2 PF00155.21 gi|15922467|ref|NP_378136.1| - 1.2e-05 24.7 0.0 0.007 15.6 0.0 2.0 2 0 0 2 2 2 2 Aminotransferase class I and II Cys_Met_Meta_PP PF01053.20 gi|15922467|ref|NP_378136.1| - 6.7e-05 21.6 0.0 0.00016 20.3 0.1 1.5 2 0 0 2 2 2 1 Cys/Met metabolism PLP-dependent enzyme DegT_DnrJ_EryC1 PF01041.17 gi|15922467|ref|NP_378136.1| - 0.0091 15.3 0.0 0.015 14.7 0.0 1.2 1 0 0 1 1 1 1 DegT/DnrJ/EryC1/StrS aminotransferase family DUF4468 PF14730.6 gi|15922467|ref|NP_378136.1| - 0.043 14.1 0.1 0.09 13.1 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF4468) with TBP-like fold Calcipressin PF04847.12 gi|15922469|ref|NP_378138.1| - 0.31 10.7 1.9 0.44 10.3 1.9 1.2 1 0 0 1 1 1 0 Calcipressin LcnG-beta PF11632.8 gi|15922470|ref|NP_378139.1| - 0.14 12.1 2.0 2.9 7.9 0.1 2.7 2 0 0 2 2 2 0 Lactococcin G-beta Zn-ribbon_8 PF09723.10 gi|15922471|ref|NP_378140.1| - 0.0013 18.8 0.3 0.0025 17.9 0.3 1.5 1 0 0 1 1 1 1 Zinc ribbon domain HypA PF01155.19 gi|15922471|ref|NP_378140.1| - 0.0026 17.7 0.4 0.0035 17.3 0.4 1.3 1 1 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA NRDD PF13597.6 gi|15922471|ref|NP_378140.1| - 0.0041 16.0 0.6 0.005 15.7 0.6 1.0 1 0 0 1 1 1 1 Anaerobic ribonucleoside-triphosphate reductase zf-C2HC5 PF06221.13 gi|15922471|ref|NP_378140.1| - 0.0045 17.0 0.2 0.0069 16.4 0.2 1.3 1 0 0 1 1 1 1 Putative zinc finger motif, C2HC5-type z-alpha PF02295.17 gi|15922471|ref|NP_378140.1| - 0.0058 16.6 0.3 0.0096 16.0 0.3 1.3 1 0 0 1 1 1 1 Adenosine deaminase z-alpha domain ADK_lid PF05191.14 gi|15922471|ref|NP_378140.1| - 0.0069 16.3 2.6 0.0069 16.3 2.6 1.6 2 0 0 2 2 2 1 Adenylate kinase, active site lid Sigma70_r4 PF04545.16 gi|15922471|ref|NP_378140.1| - 0.014 14.9 0.0 0.02 14.4 0.0 1.2 1 0 0 1 1 1 0 Sigma-70, region 4 DUF1187 PF06688.11 gi|15922471|ref|NP_378140.1| - 0.02 15.2 0.0 0.032 14.6 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF1187) TF_Zn_Ribbon PF08271.12 gi|15922471|ref|NP_378140.1| - 0.041 13.4 0.8 0.94 9.0 0.2 2.3 2 0 0 2 2 2 0 TFIIB zinc-binding DUF35_N PF12172.8 gi|15922471|ref|NP_378140.1| - 0.042 13.7 0.6 7 6.6 0.0 2.1 2 0 0 2 2 2 0 Rubredoxin-like zinc ribbon domain (DUF35_N) HTH_11 PF08279.12 gi|15922471|ref|NP_378140.1| - 0.12 12.3 0.2 0.18 11.8 0.2 1.2 1 0 0 1 1 1 0 HTH domain DUF1451 PF07295.11 gi|15922471|ref|NP_378140.1| - 0.28 11.2 1.4 0.29 11.2 0.4 1.5 2 0 0 2 2 2 0 Zinc-ribbon containing domain UPF0547 PF10571.9 gi|15922471|ref|NP_378140.1| - 0.37 10.9 6.4 0.77 9.9 0.2 2.3 2 0 0 2 2 2 0 Uncharacterised protein family UPF0547 PhnA_Zn_Ribbon PF08274.12 gi|15922471|ref|NP_378140.1| - 1 9.4 5.4 0.56 10.2 1.6 2.1 1 1 1 2 2 2 0 PhnA Zinc-Ribbon Hydrolase PF00702.26 gi|15922472|ref|NP_378141.1| - 2.1e-13 51.1 0.0 7.9e-13 49.2 0.0 1.8 1 1 0 1 1 1 1 haloacid dehalogenase-like hydrolase HAD_2 PF13419.6 gi|15922472|ref|NP_378141.1| - 1e-12 48.5 0.0 1.5e-12 48.0 0.0 1.4 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|15922472|ref|NP_378141.1| - 0.00036 20.6 0.0 0.00075 19.5 0.0 1.6 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase_6 PF13344.6 gi|15922472|ref|NP_378141.1| - 0.028 14.5 0.0 0.05 13.7 0.0 1.5 1 0 0 1 1 1 0 Haloacid dehalogenase-like hydrolase HAD PF12710.7 gi|15922472|ref|NP_378141.1| - 0.055 13.9 0.0 0.064 13.7 0.0 1.3 1 0 0 1 1 1 0 haloacid dehalogenase-like hydrolase MTS PF05175.14 gi|15922473|ref|NP_378142.1| - 1.3e-09 37.8 0.0 1.9e-09 37.3 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase small domain Methyltransf_25 PF13649.6 gi|15922473|ref|NP_378142.1| - 5.2e-08 33.5 0.0 1.3e-07 32.2 0.0 1.6 1 1 1 2 2 2 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|15922473|ref|NP_378142.1| - 8.2e-08 32.2 0.1 1e-07 31.9 0.1 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|15922473|ref|NP_378142.1| - 1.5e-05 25.6 0.0 6.2e-05 23.6 0.0 1.8 2 0 0 2 2 2 1 Methyltransferase domain PrmA PF06325.13 gi|15922473|ref|NP_378142.1| - 0.0013 18.1 0.2 0.0024 17.3 0.1 1.4 2 0 0 2 2 2 1 Ribosomal protein L11 methyltransferase (PrmA) TehB PF03848.14 gi|15922473|ref|NP_378142.1| - 0.0072 15.8 0.3 0.013 15.0 0.2 1.4 1 1 0 1 1 1 1 Tellurite resistance protein TehB Methyltransf_12 PF08242.12 gi|15922473|ref|NP_378142.1| - 0.02 15.6 0.1 0.035 14.8 0.1 1.4 1 1 0 1 1 1 0 Methyltransferase domain UPF0020 PF01170.18 gi|15922473|ref|NP_378142.1| - 0.13 11.9 0.0 0.22 11.2 0.0 1.3 1 0 0 1 1 1 0 Putative RNA methylase family UPF0020 Methyltransf_4 PF02390.17 gi|15922473|ref|NP_378142.1| - 2.9 7.3 5.4 0.33 10.4 0.1 2.0 2 1 0 2 2 2 0 Putative methyltransferase Hydrolase_3 PF08282.12 gi|15922474|ref|NP_378143.1| - 4.2e-23 82.4 5.8 7.3e-17 62.0 1.9 2.0 1 1 1 2 2 2 2 haloacid dehalogenase-like hydrolase S6PP PF05116.13 gi|15922474|ref|NP_378143.1| - 5.8e-10 39.1 0.1 5.1e-06 26.2 0.1 2.1 2 0 0 2 2 2 2 Sucrose-6F-phosphate phosphohydrolase Trehalose_PPase PF02358.16 gi|15922474|ref|NP_378143.1| - 2.5e-05 23.5 0.0 0.097 11.8 0.0 2.2 1 1 0 2 2 2 2 Trehalose-phosphatase HAD PF12710.7 gi|15922474|ref|NP_378143.1| - 0.0067 16.9 0.2 2.6 8.4 0.0 2.9 1 1 2 3 3 3 2 haloacid dehalogenase-like hydrolase AP_endonuc_2 PF01261.24 gi|15922475|ref|NP_378144.1| - 3.2e-25 88.8 0.1 4.1e-25 88.5 0.1 1.1 1 0 0 1 1 1 1 Xylose isomerase-like TIM barrel UvdE PF03851.14 gi|15922475|ref|NP_378144.1| - 0.00081 18.7 0.0 0.0012 18.2 0.0 1.2 1 0 0 1 1 1 1 UV-endonuclease UvdE DUF3973 PF13119.6 gi|15922475|ref|NP_378144.1| - 0.07 13.2 0.1 0.16 12.1 0.1 1.6 1 0 0 1 1 1 0 Domain of unknown function (DUF3973) FAD_binding_4 PF01565.23 gi|15922476|ref|NP_378145.1| - 7.7e-34 116.4 0.0 1.6e-33 115.4 0.0 1.6 1 0 0 1 1 1 1 FAD binding domain Fer4_17 PF13534.6 gi|15922476|ref|NP_378145.1| - 6.6e-09 36.2 1.7 1.2e-08 35.3 1.7 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|15922476|ref|NP_378145.1| - 6.7e-07 29.7 1.3 1.3e-06 28.8 1.3 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15922476|ref|NP_378145.1| - 4.6e-06 26.6 2.7 0.071 13.2 0.2 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15922476|ref|NP_378145.1| - 6.5e-05 23.4 4.6 0.00018 22.0 4.6 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15922476|ref|NP_378145.1| - 0.00016 22.5 3.5 0.00052 20.9 3.5 1.9 1 1 0 1 1 1 1 4Fe-4S double cluster binding domain Fer4_18 PF13746.6 gi|15922476|ref|NP_378145.1| - 0.00024 21.3 3.0 0.079 13.2 0.5 2.6 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15922476|ref|NP_378145.1| - 0.0004 20.5 7.8 0.05 13.8 10.8 2.2 1 1 2 3 3 3 3 4Fe-4S dicluster domain FAD-oxidase_C PF02913.19 gi|15922476|ref|NP_378145.1| - 0.0032 17.2 0.0 0.69 9.5 0.0 3.1 3 0 0 3 3 3 1 FAD linked oxidases, C-terminal domain Fer4_21 PF14697.6 gi|15922476|ref|NP_378145.1| - 0.008 16.3 7.5 0.1 12.8 0.4 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4 PF00037.27 gi|15922476|ref|NP_378145.1| - 0.047 13.5 16.6 0.18 11.6 3.9 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain DUF2397 PF09660.10 gi|15922476|ref|NP_378145.1| - 0.094 11.6 0.1 0.15 10.9 0.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2397) Fer4_2 PF12797.7 gi|15922476|ref|NP_378145.1| - 1.1 9.5 12.9 0.13 12.4 1.9 2.4 2 0 0 2 2 2 0 4Fe-4S binding domain IZUMO PF15005.6 gi|15922476|ref|NP_378145.1| - 4.3 7.9 6.4 0.17 12.4 0.2 1.8 2 0 0 2 2 1 0 Izumo sperm-egg fusion, Ig domain-associated Fer4_4 PF12800.7 gi|15922476|ref|NP_378145.1| - 5.8 7.7 11.7 0.4 11.3 2.0 2.3 2 0 0 2 2 2 0 4Fe-4S binding domain HIT PF01230.23 gi|15922477|ref|NP_378146.1| - 4.4e-24 85.1 0.0 7.1e-24 84.4 0.0 1.3 2 0 0 2 2 2 1 HIT domain DcpS_C PF11969.8 gi|15922477|ref|NP_378146.1| - 4.1e-14 53.0 0.1 1.2e-13 51.5 0.0 1.7 2 0 0 2 2 2 1 Scavenger mRNA decapping enzyme C-term binding CwfJ_C_1 PF04677.15 gi|15922477|ref|NP_378146.1| - 0.003 17.4 0.1 0.0052 16.7 0.1 1.5 1 1 0 1 1 1 1 Protein similar to CwfJ C-terminus 1 Imm48 PF15574.6 gi|15922477|ref|NP_378146.1| - 0.08 12.7 0.0 0.21 11.3 0.0 1.7 1 0 0 1 1 1 0 Immunity protein 48 SNARE_assoc PF09335.11 gi|15922478|ref|NP_378147.1| - 0.0049 17.3 4.5 0.0054 17.2 2.7 2.1 2 1 0 2 2 2 1 SNARE associated Golgi protein RseC_MucC PF04246.12 gi|15922478|ref|NP_378147.1| - 3.6 7.6 4.1 10 6.1 0.1 2.3 2 0 0 2 2 2 0 Positive regulator of sigma(E), RseC/MucC NUDIX PF00293.28 gi|15922479|ref|NP_378148.1| - 2.1e-16 60.2 0.1 2.9e-16 59.7 0.1 1.2 1 0 0 1 1 1 1 NUDIX domain EppA_BapA PF07268.11 gi|15922479|ref|NP_378148.1| - 0.074 13.0 0.1 0.12 12.3 0.1 1.5 1 0 0 1 1 1 0 Exported protein precursor (EppA/BapA) Chlor_dismutase PF06778.12 gi|15922480|ref|NP_378149.1| - 1.1e-49 168.6 0.4 8.8e-49 165.7 0.0 1.9 1 1 1 2 2 2 2 Chlorite dismutase Darcynin PF17074.5 gi|15922480|ref|NP_378149.1| - 0.0071 16.6 0.1 0.02 15.1 0.0 1.7 2 0 0 2 2 2 1 Darcynin, domain of unknown function HSR PF03172.13 gi|15922480|ref|NP_378149.1| - 0.028 14.6 0.5 0.051 13.7 0.5 1.4 1 0 0 1 1 1 0 HSR domain BtpA PF03437.15 gi|15922481|ref|NP_378150.1| - 2.5e-74 249.9 0.1 2.8e-74 249.7 0.1 1.0 1 0 0 1 1 1 1 BtpA family NTPase_1 PF03266.15 gi|15922482|ref|NP_378151.1| - 3.4e-30 105.1 1.3 4e-30 104.9 1.3 1.1 1 0 0 1 1 1 1 NTPase UPF0228 PF05727.11 gi|15922482|ref|NP_378151.1| - 0.0083 15.9 1.7 0.017 14.9 1.7 1.5 1 1 0 1 1 1 1 Uncharacterised protein family (UPF0228) CRS1_YhbY PF01985.21 gi|15922482|ref|NP_378151.1| - 0.037 14.2 0.2 0.054 13.7 0.2 1.3 1 0 0 1 1 1 0 CRS1 / YhbY (CRM) domain DUF4923 PF16270.5 gi|15922482|ref|NP_378151.1| - 0.046 13.5 0.0 0.1 12.4 0.0 1.6 1 1 1 2 2 2 0 Lipocalin-like domain (DUF4923) GT87 PF09594.10 gi|15922483|ref|NP_378152.1| - 0.0026 17.5 8.2 0.0051 16.5 8.1 1.6 1 1 0 1 1 1 1 Glycosyltransferase family 87 NAD_synthase PF02540.17 gi|15922484|ref|NP_378153.1| - 2.1e-74 249.7 0.1 2.4e-74 249.5 0.1 1.0 1 0 0 1 1 1 1 NAD synthase Asn_synthase PF00733.21 gi|15922484|ref|NP_378153.1| - 1.3e-05 25.0 0.0 1.6e-05 24.8 0.0 1.2 1 0 0 1 1 1 1 Asparagine synthase tRNA_Me_trans PF03054.16 gi|15922484|ref|NP_378153.1| - 0.00029 19.7 0.0 0.0088 14.9 0.0 2.2 2 0 0 2 2 2 1 tRNA methyl transferase ThiI PF02568.14 gi|15922484|ref|NP_378153.1| - 0.00058 19.5 0.5 0.00095 18.8 0.1 1.5 2 0 0 2 2 2 1 Thiamine biosynthesis protein (ThiI) QueC PF06508.13 gi|15922484|ref|NP_378153.1| - 0.015 14.8 0.0 0.038 13.5 0.0 1.7 2 0 0 2 2 2 0 Queuosine biosynthesis protein QueC PBP_dimer PF03717.15 gi|15922484|ref|NP_378153.1| - 0.058 13.7 0.5 0.089 13.1 0.0 1.5 2 0 0 2 2 2 0 Penicillin-binding Protein dimerisation domain CN_hydrolase PF00795.22 gi|15922485|ref|NP_378154.1| - 1.6e-31 109.6 0.0 1.8e-31 109.4 0.0 1.0 1 0 0 1 1 1 1 Carbon-nitrogen hydrolase HTH_5 PF01022.20 gi|15922486|ref|NP_378155.1| - 3.6e-11 42.8 0.0 6.3e-11 42.0 0.0 1.4 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|15922486|ref|NP_378155.1| - 8.3e-08 32.0 0.3 1.2e-07 31.5 0.3 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_20 PF12840.7 gi|15922486|ref|NP_378155.1| - 1.4e-07 31.4 0.0 1.7e-07 31.2 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_45 PF14947.6 gi|15922486|ref|NP_378155.1| - 4.3e-07 29.8 3.5 5.2e-07 29.6 3.5 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix HTH_11 PF08279.12 gi|15922486|ref|NP_378155.1| - 4.8e-05 23.2 0.3 6.4e-05 22.8 0.3 1.2 1 0 0 1 1 1 1 HTH domain Rrf2 PF02082.20 gi|15922486|ref|NP_378155.1| - 8.5e-05 22.8 0.1 0.00012 22.4 0.1 1.1 1 0 0 1 1 1 1 Transcriptional regulator HrcA_DNA-bdg PF03444.15 gi|15922486|ref|NP_378155.1| - 0.00014 21.5 0.0 0.00017 21.1 0.0 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix transcription repressor, HrcA DNA-binding Phage_rep_org_N PF09681.10 gi|15922486|ref|NP_378155.1| - 0.00022 21.2 0.2 0.00026 20.9 0.2 1.1 1 0 0 1 1 1 1 N-terminal phage replisome organiser (Phage_rep_org_N) HTH_29 PF13551.6 gi|15922486|ref|NP_378155.1| - 0.00022 21.2 0.0 0.00037 20.5 0.0 1.4 1 1 0 1 1 1 1 Winged helix-turn helix HTH_24 PF13412.6 gi|15922486|ref|NP_378155.1| - 0.00032 20.2 0.3 0.0012 18.3 0.3 1.9 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding GerE PF00196.19 gi|15922486|ref|NP_378155.1| - 0.00037 20.0 0.0 0.0005 19.6 0.0 1.2 1 0 0 1 1 1 1 Bacterial regulatory proteins, luxR family HTH_38 PF13936.6 gi|15922486|ref|NP_378155.1| - 0.0013 18.4 0.1 0.0021 17.8 0.1 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_28 PF13518.6 gi|15922486|ref|NP_378155.1| - 0.0015 18.6 0.0 0.0021 18.1 0.0 1.2 1 0 0 1 1 1 1 Helix-turn-helix domain MarR PF01047.22 gi|15922486|ref|NP_378155.1| - 0.0019 18.1 0.0 0.0026 17.7 0.0 1.2 1 0 0 1 1 1 1 MarR family Dimerisation2 PF16864.5 gi|15922486|ref|NP_378155.1| - 0.003 17.5 0.1 0.0036 17.2 0.1 1.1 1 0 0 1 1 1 1 Dimerisation domain MarR_2 PF12802.7 gi|15922486|ref|NP_378155.1| - 0.007 16.2 0.0 0.0091 15.9 0.0 1.1 1 0 0 1 1 1 1 MarR family DUF2250 PF10007.9 gi|15922486|ref|NP_378155.1| - 0.012 15.7 1.2 0.37 10.9 0.2 2.1 1 1 1 2 2 2 0 Uncharacterized protein conserved in archaea (DUF2250) HTH_IclR PF09339.10 gi|15922486|ref|NP_378155.1| - 0.013 15.2 0.0 0.02 14.7 0.0 1.2 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_12 PF08461.10 gi|15922486|ref|NP_378155.1| - 0.016 15.2 0.3 0.024 14.6 0.3 1.4 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain Sigma70_r4_2 PF08281.12 gi|15922486|ref|NP_378155.1| - 0.017 14.8 0.0 0.032 13.9 0.0 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 DUF4423 PF14394.6 gi|15922486|ref|NP_378155.1| - 0.018 14.7 0.1 0.021 14.5 0.1 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_27 PF13463.6 gi|15922486|ref|NP_378155.1| - 0.018 15.5 0.0 0.025 15.1 0.0 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain DUF2513 PF10711.9 gi|15922486|ref|NP_378155.1| - 0.018 15.3 0.2 0.028 14.7 0.2 1.4 1 1 0 1 1 1 0 Hypothetical protein (DUF2513) Fe_dep_repress PF01325.19 gi|15922486|ref|NP_378155.1| - 0.038 14.2 0.0 0.056 13.6 0.0 1.2 1 0 0 1 1 1 0 Iron dependent repressor, N-terminal DNA binding domain HTH_23 PF13384.6 gi|15922486|ref|NP_378155.1| - 0.042 13.7 0.0 0.07 13.0 0.0 1.4 1 0 0 1 1 1 0 Homeodomain-like domain FaeA PF04703.12 gi|15922486|ref|NP_378155.1| - 0.055 13.9 0.1 0.073 13.5 0.1 1.2 1 0 0 1 1 1 0 FaeA-like protein HTH_34 PF13601.6 gi|15922486|ref|NP_378155.1| - 0.056 13.6 0.3 0.067 13.4 0.3 1.2 1 0 0 1 1 1 0 Winged helix DNA-binding domain Penicillinase_R PF03965.16 gi|15922486|ref|NP_378155.1| - 0.059 13.7 0.3 0.07 13.5 0.3 1.2 1 0 0 1 1 1 0 Penicillinase repressor HTH_30 PF13556.6 gi|15922486|ref|NP_378155.1| - 0.061 13.1 0.2 0.11 12.4 0.2 1.5 1 1 0 1 1 1 0 PucR C-terminal helix-turn-helix domain DUF2089 PF09862.9 gi|15922486|ref|NP_378155.1| - 0.093 12.8 0.3 0.15 12.1 0.3 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF2089) GntR PF00392.21 gi|15922486|ref|NP_378155.1| - 0.14 11.9 0.0 0.18 11.4 0.0 1.3 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family LexA_DNA_bind PF01726.16 gi|15922486|ref|NP_378155.1| - 0.17 11.7 0.0 0.29 10.9 0.0 1.5 1 1 0 1 1 1 0 LexA DNA binding domain Pterin_4a PF01329.19 gi|15922489|ref|NP_378158.1| - 3.6e-32 110.4 0.0 3.9e-32 110.3 0.0 1.0 1 0 0 1 1 1 1 Pterin 4 alpha carbinolamine dehydratase RapH_N PF18801.1 gi|15922489|ref|NP_378158.1| - 0.11 12.6 1.9 0.56 10.3 0.0 2.3 3 0 0 3 3 3 0 response regulator aspartate phosphatase H, N terminal TM_helix PF05552.12 gi|15922490|ref|NP_378159.1| - 3.6e-11 42.9 11.3 3.1e-09 36.7 3.6 4.9 7 0 0 7 7 7 2 Conserved TM helix Snapin_Pallidin PF14712.6 gi|15922491|ref|NP_378160.1| - 0.00022 21.5 7.4 0.00064 20.1 1.4 2.1 2 0 0 2 2 2 1 Snapin/Pallidin DASH_Dad2 PF08654.10 gi|15922491|ref|NP_378160.1| - 0.00026 21.3 0.9 0.016 15.6 0.3 2.1 2 0 0 2 2 2 1 DASH complex subunit Dad2 DUF4686 PF15742.5 gi|15922491|ref|NP_378160.1| - 0.0008 18.7 9.0 0.00096 18.4 9.0 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4686) HSCB_C PF07743.13 gi|15922491|ref|NP_378160.1| - 0.0024 18.3 6.0 0.47 11.0 0.9 2.3 2 0 0 2 2 2 2 HSCB C-terminal oligomerisation domain E2F_CC-MB PF16421.5 gi|15922491|ref|NP_378160.1| - 0.003 17.9 4.9 0.0088 16.4 0.6 2.2 2 0 0 2 2 2 1 E2F transcription factor CC-MB domain XhlA PF10779.9 gi|15922491|ref|NP_378160.1| - 0.0053 16.9 1.0 0.0053 16.9 1.0 2.7 2 1 0 2 2 2 1 Haemolysin XhlA NPV_P10 PF05531.12 gi|15922491|ref|NP_378160.1| - 0.0067 16.9 2.4 0.7 10.4 0.1 2.1 2 0 0 2 2 2 1 Nucleopolyhedrovirus P10 protein Syntaxin PF00804.25 gi|15922491|ref|NP_378160.1| - 0.0093 15.7 3.3 0.012 15.3 3.3 1.1 1 0 0 1 1 1 1 Syntaxin TerB_N PF13208.6 gi|15922491|ref|NP_378160.1| - 0.012 15.4 1.3 0.013 15.2 1.3 1.0 1 0 0 1 1 1 0 TerB N-terminal domain DivIC PF04977.15 gi|15922491|ref|NP_378160.1| - 0.012 15.4 2.1 0.012 15.4 2.1 2.1 2 0 0 2 2 2 0 Septum formation initiator DHR10 PF18595.1 gi|15922491|ref|NP_378160.1| - 0.013 15.5 2.4 0.013 15.5 2.4 2.1 2 0 0 2 2 2 0 Designed helical repeat protein 10 domain V-SNARE PF05008.15 gi|15922491|ref|NP_378160.1| - 0.014 15.8 7.5 0.88 10.0 1.5 2.3 2 1 0 2 2 2 0 Vesicle transport v-SNARE protein N-terminus KIP1 PF07765.12 gi|15922491|ref|NP_378160.1| - 0.022 14.9 8.6 2.3 8.4 0.9 3.1 2 1 1 3 3 3 0 KIP1-like protein Ntox28 PF15605.6 gi|15922491|ref|NP_378160.1| - 0.022 15.0 2.8 0.023 15.0 0.2 1.9 2 0 0 2 2 2 0 Bacterial toxin 28 Tropomyosin_1 PF12718.7 gi|15922491|ref|NP_378160.1| - 0.023 14.9 3.0 0.023 14.9 3.0 2.1 2 0 0 2 2 2 0 Tropomyosin like OmpH PF03938.14 gi|15922491|ref|NP_378160.1| - 0.027 14.8 9.5 0.039 14.3 9.5 1.2 1 0 0 1 1 1 0 Outer membrane protein (OmpH-like) Swi5 PF07061.11 gi|15922491|ref|NP_378160.1| - 0.03 14.4 1.7 0.03 14.4 1.7 2.2 2 0 0 2 2 2 0 Swi5 BLOC1_2 PF10046.9 gi|15922491|ref|NP_378160.1| - 0.03 14.6 9.8 0.11 12.8 1.8 2.2 2 0 0 2 2 2 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 Occludin_ELL PF07303.13 gi|15922491|ref|NP_378160.1| - 0.031 15.0 8.3 2.3 9.0 7.7 2.1 1 1 1 2 2 2 0 Occludin homology domain DUF4140 PF13600.6 gi|15922491|ref|NP_378160.1| - 0.033 14.6 2.1 0.39 11.2 0.4 2.1 2 0 0 2 2 2 0 N-terminal domain of unknown function (DUF4140) phiKZ_IP PF12699.7 gi|15922491|ref|NP_378160.1| - 0.043 13.0 6.0 0.084 12.0 0.3 2.0 2 0 0 2 2 2 0 phiKZ-like phage internal head proteins SSV1_ORF_D-335 PF07935.11 gi|15922491|ref|NP_378160.1| - 0.043 14.1 0.8 0.086 13.2 0.8 1.5 1 0 0 1 1 1 0 ORF D-335-like protein ZapB PF06005.12 gi|15922491|ref|NP_378160.1| - 0.051 14.0 3.6 0.051 14.0 3.6 2.3 2 1 0 2 2 2 0 Cell division protein ZapB DUF4200 PF13863.6 gi|15922491|ref|NP_378160.1| - 0.062 13.7 13.3 0.22 11.9 4.1 2.2 2 0 0 2 2 2 0 Domain of unknown function (DUF4200) CCDC53 PF10152.9 gi|15922491|ref|NP_378160.1| - 0.067 13.6 2.8 0.08 13.4 2.8 1.4 1 1 0 1 1 1 0 Subunit CCDC53 of WASH complex Imm7 PF15585.6 gi|15922491|ref|NP_378160.1| - 0.068 13.5 0.7 0.2 11.9 0.1 1.9 1 1 2 3 3 3 0 Immunity protein 7 DUF2730 PF10805.8 gi|15922491|ref|NP_378160.1| - 0.084 13.0 3.6 0.33 11.1 0.3 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2730) CREPT PF16566.5 gi|15922491|ref|NP_378160.1| - 0.091 12.9 0.5 0.091 12.9 0.5 2.0 2 0 0 2 2 2 0 Cell-cycle alteration and expression-elevated protein in tumour Spc24 PF08286.11 gi|15922491|ref|NP_378160.1| - 0.1 12.8 5.9 0.47 10.7 0.5 2.1 2 0 0 2 2 2 0 Spc24 subunit of Ndc80 CtIP_N PF10482.9 gi|15922491|ref|NP_378160.1| - 0.11 12.5 7.1 0.14 12.2 0.6 2.1 2 0 0 2 2 2 0 Tumour-suppressor protein CtIP N-terminal domain FlxA PF14282.6 gi|15922491|ref|NP_378160.1| - 0.13 12.2 12.0 0.16 12.0 3.8 2.2 2 0 0 2 2 2 0 FlxA-like protein DUF4446 PF14584.6 gi|15922491|ref|NP_378160.1| - 0.14 12.1 5.4 0.7 9.9 0.6 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF4446) LPP PF04728.13 gi|15922491|ref|NP_378160.1| - 0.16 12.4 3.1 0.36 11.3 0.2 2.3 2 1 0 2 2 2 0 Lipoprotein leucine-zipper MICSWaP PF17018.5 gi|15922491|ref|NP_378160.1| - 0.2 11.2 5.3 0.074 12.6 0.8 2.0 1 1 1 2 2 2 0 Spore wall protein Vps51 PF08700.11 gi|15922491|ref|NP_378160.1| - 0.21 11.7 4.8 0.34 11.0 1.5 2.2 2 0 0 2 2 2 0 Vps51/Vps67 DUF3585 PF12130.8 gi|15922491|ref|NP_378160.1| - 0.22 11.7 12.3 4.4 7.4 12.3 2.1 1 1 0 1 1 1 0 Bivalent Mical/EHBP Rab binding domain Nsp1_C PF05064.13 gi|15922491|ref|NP_378160.1| - 0.22 11.3 6.7 0.32 10.8 1.6 2.2 2 0 0 2 2 2 0 Nsp1-like C-terminal region Paralemmin PF03285.15 gi|15922491|ref|NP_378160.1| - 0.25 10.9 3.9 0.28 10.7 3.9 1.2 1 0 0 1 1 1 0 Paralemmin Plasmodium_Vir PF05795.11 gi|15922491|ref|NP_378160.1| - 0.3 10.5 8.8 0.32 10.4 8.8 1.1 1 0 0 1 1 1 0 Plasmodium vivax Vir protein DUF1664 PF07889.12 gi|15922491|ref|NP_378160.1| - 0.31 11.1 3.9 1.3 9.1 0.5 2.1 2 0 0 2 2 2 0 Protein of unknown function (DUF1664) AAA_13 PF13166.6 gi|15922491|ref|NP_378160.1| - 0.32 9.6 8.5 0.89 8.1 8.5 1.6 1 1 0 1 1 1 0 AAA domain Prefoldin_2 PF01920.20 gi|15922491|ref|NP_378160.1| - 0.33 10.9 18.9 0.47 10.4 7.3 2.6 1 1 1 3 3 3 0 Prefoldin subunit ORF6C PF10552.9 gi|15922491|ref|NP_378160.1| - 0.35 11.0 11.1 6.5 6.9 10.8 2.1 1 1 0 1 1 1 0 ORF6C domain PilO PF04350.13 gi|15922491|ref|NP_378160.1| - 0.43 10.7 5.3 0.78 9.9 0.7 2.1 2 0 0 2 2 2 0 Pilus assembly protein, PilO DUF1319 PF07028.11 gi|15922491|ref|NP_378160.1| - 0.43 10.8 8.2 0.16 12.2 4.0 2.0 1 1 1 2 2 2 0 Protein of unknown function (DUF1319) PRKG1_interact PF15898.5 gi|15922491|ref|NP_378160.1| - 0.43 11.5 10.5 0.97 10.4 10.5 1.5 1 1 0 1 1 1 0 cGMP-dependent protein kinase interacting domain Cep57_CLD_2 PF14197.6 gi|15922491|ref|NP_378160.1| - 0.43 10.7 8.2 0.6 10.2 2.4 2.3 2 0 0 2 2 2 0 Centrosome localisation domain of PPC89 Com_YlbF PF06133.11 gi|15922491|ref|NP_378160.1| - 0.44 11.2 14.5 2.8 8.6 14.5 1.9 1 1 0 1 1 1 0 Control of competence regulator ComK, YlbF/YmcA Prefoldin PF02996.17 gi|15922491|ref|NP_378160.1| - 0.5 10.3 9.8 0.25 11.3 2.0 2.3 2 1 0 2 2 2 0 Prefoldin subunit Fib_alpha PF08702.10 gi|15922491|ref|NP_378160.1| - 0.58 10.3 7.8 3.2 7.9 7.4 1.9 1 1 0 1 1 1 0 Fibrinogen alpha/beta chain family FlaC_arch PF05377.11 gi|15922491|ref|NP_378160.1| - 0.61 10.5 9.5 0.57 10.6 2.3 2.4 2 0 0 2 2 2 0 Flagella accessory protein C (FlaC) Laminin_II PF06009.12 gi|15922491|ref|NP_378160.1| - 1.9 8.5 8.7 7.6 6.6 8.7 1.9 1 1 0 1 1 1 0 Laminin Domain II DUF16 PF01519.16 gi|15922491|ref|NP_378160.1| - 2.2 8.8 11.5 0.69 10.4 3.8 2.1 1 1 0 2 2 2 0 Protein of unknown function DUF16 YabA PF06156.13 gi|15922491|ref|NP_378160.1| - 2.3 8.9 9.0 20 5.9 9.0 2.1 1 1 0 1 1 1 0 Initiation control protein YabA HNOBA PF07701.14 gi|15922491|ref|NP_378160.1| - 2.4 7.6 6.5 5.2 6.4 0.3 2.1 2 0 0 2 2 2 0 Heme NO binding associated Ax_dynein_light PF10211.9 gi|15922491|ref|NP_378160.1| - 2.7 7.9 12.7 1.1 9.2 7.4 2.0 1 1 1 2 2 2 0 Axonemal dynein light chain mCpol PF18182.1 gi|15922491|ref|NP_378160.1| - 2.7 8.3 5.2 10 6.5 0.6 2.1 2 0 0 2 2 2 0 minimal CRISPR polymerase domain DUF5320 PF17253.2 gi|15922491|ref|NP_378160.1| - 2.8 9.1 10.2 6.7 7.8 0.3 2.1 2 0 0 2 2 2 0 Family of unknown function (DUF5320) Nas2_N PF18265.1 gi|15922491|ref|NP_378160.1| - 2.8 7.9 9.1 0.54 10.2 1.8 2.6 2 1 1 3 3 3 0 Nas2 N_terminal domain APG6_N PF17675.1 gi|15922491|ref|NP_378160.1| - 3.9 8.0 18.2 1 9.9 7.7 2.1 1 1 1 2 2 2 0 Apg6 coiled-coil region CENP-Q PF13094.6 gi|15922491|ref|NP_378160.1| - 4.8 7.4 10.6 1.4 9.1 0.7 2.1 1 1 1 2 2 2 0 CENP-Q, a CENPA-CAD centromere complex subunit Snf7 PF03357.21 gi|15922491|ref|NP_378160.1| - 4.8 6.7 13.9 22 4.6 13.9 1.8 1 1 0 1 1 1 0 Snf7 Med4 PF10018.9 gi|15922491|ref|NP_378160.1| - 5.1 6.7 10.4 0.39 10.4 3.7 2.0 1 1 1 2 2 2 0 Vitamin-D-receptor interacting Mediator subunit 4 bZIP_2 PF07716.15 gi|15922491|ref|NP_378160.1| - 5.9 7.0 13.5 0.73 10.0 5.5 2.3 2 0 0 2 2 2 0 Basic region leucine zipper TSC22 PF01166.18 gi|15922491|ref|NP_378160.1| - 7.5 7.0 9.2 0.91 9.9 1.6 2.6 2 1 1 3 3 2 0 TSC-22/dip/bun family DUF5595 PF18077.1 gi|15922491|ref|NP_378160.1| - 7.6 6.7 10.7 5.8 7.1 3.0 2.8 2 1 1 3 3 3 0 Domain of unknown function (DUF5595) DUF4795 PF16043.5 gi|15922491|ref|NP_378160.1| - 9.4 5.8 11.0 2.7 7.5 3.4 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4795) Cdc6_C PF09079.11 gi|15922492|ref|NP_378161.1| - 3.8e-14 52.4 0.0 7.6e-14 51.5 0.0 1.5 1 0 0 1 1 1 1 CDC6, C terminal winged helix domain AAA_22 PF13401.6 gi|15922492|ref|NP_378161.1| - 1.5e-10 41.4 0.1 5.9e-10 39.6 0.0 1.8 2 0 0 2 2 2 1 AAA domain AAA PF00004.29 gi|15922492|ref|NP_378161.1| - 5.2e-06 26.9 0.1 1.5e-05 25.4 0.0 1.8 2 0 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) AAA_16 PF13191.6 gi|15922492|ref|NP_378161.1| - 0.0028 18.1 0.0 0.0075 16.7 0.0 1.7 2 0 0 2 2 2 1 AAA ATPase domain Sigma54_activat PF00158.26 gi|15922492|ref|NP_378161.1| - 0.0047 16.6 0.0 0.011 15.4 0.0 1.7 1 0 0 1 1 1 1 Sigma-54 interaction domain AAA_7 PF12775.7 gi|15922492|ref|NP_378161.1| - 0.011 15.3 0.0 0.063 12.8 0.0 2.0 2 0 0 2 2 2 0 P-loop containing dynein motor region NB-ARC PF00931.22 gi|15922492|ref|NP_378161.1| - 0.012 14.8 0.1 0.018 14.2 0.1 1.3 1 0 0 1 1 1 0 NB-ARC domain DUF2075 PF09848.9 gi|15922492|ref|NP_378161.1| - 0.023 13.9 0.0 0.038 13.2 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized conserved protein (DUF2075) KNOX1 PF03790.13 gi|15922492|ref|NP_378161.1| - 0.03 14.1 0.1 0.12 12.1 0.0 2.0 2 0 0 2 2 2 0 KNOX1 domain DUF87 PF01935.17 gi|15922492|ref|NP_378161.1| - 0.035 14.2 0.0 0.31 11.1 0.0 2.3 3 0 0 3 3 3 0 Helicase HerA, central domain AAA_assoc_2 PF16193.5 gi|15922492|ref|NP_378161.1| - 0.055 13.8 0.1 0.19 12.1 0.0 1.9 2 0 0 2 2 2 0 AAA C-terminal domain Torsin PF06309.11 gi|15922492|ref|NP_378161.1| - 0.11 12.7 0.0 0.29 11.3 0.0 1.7 1 0 0 1 1 1 0 Torsin Microtub_bd PF16796.5 gi|15922492|ref|NP_378161.1| - 0.14 12.1 0.3 0.56 10.1 0.0 2.1 2 0 0 2 2 2 0 Microtubule binding Iso_dh PF00180.20 gi|15922493|ref|NP_378162.1| - 3.6e-107 358.5 0.3 4.3e-107 358.3 0.3 1.0 1 0 0 1 1 1 1 Isocitrate/isopropylmalate dehydrogenase TAF PF02969.17 gi|15922493|ref|NP_378162.1| - 0.098 12.8 2.6 1.1 9.4 0.2 2.7 3 0 0 3 3 3 0 TATA box binding protein associated factor (TAF) Pro-kuma_activ PF09286.11 gi|15922494|ref|NP_378163.1| - 2.7e-06 27.7 0.0 6.9e-06 26.4 0.0 1.6 1 0 0 1 1 1 1 Pro-kumamolisin, activation domain Peptidase_S8 PF00082.22 gi|15922494|ref|NP_378163.1| - 7.1e-05 22.2 0.1 0.00017 21.0 0.1 1.6 1 0 0 1 1 1 1 Subtilase family DUF4165 PF13752.6 gi|15922494|ref|NP_378163.1| - 0.0044 17.0 2.1 0.012 15.6 0.6 2.5 2 0 0 2 2 2 1 Domain of unknown function (DUF4165) Big_3_5 PF16640.5 gi|15922494|ref|NP_378163.1| - 0.0071 16.5 0.1 0.0071 16.5 0.1 3.2 4 0 0 4 4 4 1 Bacterial Ig-like domain (group 3) Laminin_II PF06009.12 gi|15922496|ref|NP_378165.1| - 0.0091 16.0 4.1 0.0091 16.0 4.1 2.6 2 1 0 2 2 2 1 Laminin Domain II Baculo_PEP_C PF04513.12 gi|15922496|ref|NP_378165.1| - 0.012 15.7 4.1 0.012 15.7 4.1 2.7 3 0 0 3 3 3 0 Baculovirus polyhedron envelope protein, PEP, C terminus DASH_Dad3 PF08656.10 gi|15922496|ref|NP_378165.1| - 0.14 12.3 0.0 0.14 12.3 0.0 4.5 4 2 0 4 4 3 0 DASH complex subunit Dad3 Prominin PF05478.11 gi|15922496|ref|NP_378165.1| - 0.29 9.1 16.9 0.43 8.5 16.9 1.2 1 0 0 1 1 1 0 Prominin DUF3106 PF11304.8 gi|15922496|ref|NP_378165.1| - 0.37 11.3 2.7 0.69 10.4 0.4 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF3106) ISG65-75 PF11727.8 gi|15922496|ref|NP_378165.1| - 0.71 9.0 14.0 0.17 11.1 5.1 2.1 2 0 0 2 2 2 0 Invariant surface glycoprotein POTRA_TamA_1 PF17243.2 gi|15922496|ref|NP_378165.1| - 1.3 9.2 3.9 0.96 9.6 0.1 2.7 2 1 1 3 3 3 0 POTRA domain TamA domain 1 Fib_alpha PF08702.10 gi|15922496|ref|NP_378165.1| - 1.8 8.8 24.5 5.1 7.3 5.9 2.5 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family FAM184 PF15665.5 gi|15922496|ref|NP_378165.1| - 2 8.1 17.6 4 7.2 17.6 1.5 1 1 0 1 1 1 0 Family with sequence similarity 184, A and B Myb_DNA-bind_7 PF15963.5 gi|15922496|ref|NP_378165.1| - 2.7 7.9 10.1 3.9 7.4 1.5 2.6 2 0 0 2 2 2 0 Myb DNA-binding like DUF948 PF06103.11 gi|15922496|ref|NP_378165.1| - 7.2 7.0 9.7 4.4 7.6 0.4 3.3 2 1 0 2 2 2 0 Bacterial protein of unknown function (DUF948) UPF0047 PF01894.17 gi|15922497|ref|NP_378166.1| - 0.062 13.5 0.6 0.91 9.7 0.1 2.2 1 1 1 2 2 2 0 Uncharacterised protein family UPF0047 DUF5610 PF18433.1 gi|15922497|ref|NP_378166.1| - 0.079 13.5 1.4 4 8.0 0.3 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF5610) YqzH PF14164.6 gi|15922497|ref|NP_378166.1| - 3.6 7.7 7.4 0.43 10.7 0.5 2.9 2 1 1 3 3 3 0 YqzH-like protein Semialdhyde_dh PF01118.24 gi|15922498|ref|NP_378167.1| - 1.6e-32 112.4 0.0 1.7e-31 109.2 0.0 2.1 2 0 0 2 2 2 1 Semialdehyde dehydrogenase, NAD binding domain Semialdhyde_dhC PF02774.18 gi|15922498|ref|NP_378167.1| - 2.4e-20 73.4 0.0 3.2e-20 73.0 0.0 1.2 1 0 0 1 1 1 1 Semialdehyde dehydrogenase, dimerisation domain ILVD_EDD PF00920.21 gi|15922499|ref|NP_378168.1| - 3.2e-213 709.1 0.1 3.6e-213 708.9 0.1 1.0 1 0 0 1 1 1 1 Dehydratase family PapC_N PF13954.6 gi|15922499|ref|NP_378168.1| - 0.16 12.0 0.0 0.29 11.1 0.0 1.3 1 0 0 1 1 1 0 PapC N-terminal domain DUF4388 PF14332.6 gi|15922500|ref|NP_378169.1| - 0.0061 16.8 0.0 4 7.8 0.0 2.8 2 1 1 3 3 3 2 Domain of unknown function (DUF4388) Ku_PK_bind PF08785.11 gi|15922500|ref|NP_378169.1| - 0.055 13.6 3.6 2.3 8.4 0.4 3.2 1 1 2 3 3 3 0 Ku C terminal domain like NUDE_C PF04880.13 gi|15922500|ref|NP_378169.1| - 0.31 11.5 4.7 0.52 10.8 4.7 1.2 1 0 0 1 1 1 0 NUDE protein, C-terminal conserved region Radical_SAM PF04055.21 gi|15922501|ref|NP_378170.1| - 9.6e-24 84.6 0.0 1.4e-23 84.1 0.0 1.3 1 0 0 1 1 1 1 Radical SAM superfamily Fer4_14 PF13394.6 gi|15922501|ref|NP_378170.1| - 1.3e-05 25.3 0.0 4.2e-05 23.7 0.0 1.8 2 0 0 2 2 2 1 4Fe-4S single cluster domain Methyltransf_25 PF13649.6 gi|15922502|ref|NP_378171.1| - 1e-17 64.6 0.0 1.8e-17 63.8 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_31 PF13847.6 gi|15922502|ref|NP_378171.1| - 7.2e-15 55.1 0.0 1e-14 54.6 0.0 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_11 PF08241.12 gi|15922502|ref|NP_378171.1| - 2.4e-13 50.6 0.0 5.1e-13 49.5 0.0 1.6 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_23 PF13489.6 gi|15922502|ref|NP_378171.1| - 3.6e-12 46.4 0.0 5.3e-12 45.9 0.0 1.2 1 0 0 1 1 1 1 Methyltransferase domain Methyltransf_12 PF08242.12 gi|15922502|ref|NP_378171.1| - 2.3e-09 37.9 0.0 3.6e-09 37.3 0.0 1.3 1 0 0 1 1 1 1 Methyltransferase domain TehB PF03848.14 gi|15922502|ref|NP_378171.1| - 3.1e-08 33.3 0.1 5.7e-08 32.4 0.1 1.4 1 0 0 1 1 1 1 Tellurite resistance protein TehB Ubie_methyltran PF01209.18 gi|15922502|ref|NP_378171.1| - 8.3e-08 31.9 0.1 7.6e-07 28.7 0.0 2.0 2 0 0 2 2 2 1 ubiE/COQ5 methyltransferase family MTS PF05175.14 gi|15922502|ref|NP_378171.1| - 1.9e-05 24.2 0.0 3.8e-05 23.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase small domain PrmA PF06325.13 gi|15922502|ref|NP_378171.1| - 3.4e-05 23.4 0.0 5.6e-05 22.7 0.0 1.3 1 0 0 1 1 1 1 Ribosomal protein L11 methyltransferase (PrmA) CMAS PF02353.20 gi|15922502|ref|NP_378171.1| - 0.00017 21.0 0.4 0.00037 19.9 0.2 1.6 2 0 0 2 2 2 1 Mycolic acid cyclopropane synthetase NodS PF05401.11 gi|15922502|ref|NP_378171.1| - 0.00043 19.9 0.0 0.00066 19.4 0.0 1.3 1 0 0 1 1 1 1 Nodulation protein S (NodS) Methyltransf_32 PF13679.6 gi|15922502|ref|NP_378171.1| - 0.00089 19.3 0.0 0.0017 18.4 0.0 1.4 2 0 0 2 2 2 1 Methyltransferase domain CheR PF01739.18 gi|15922502|ref|NP_378171.1| - 0.0045 16.5 0.1 0.13 11.8 0.0 2.3 1 1 1 2 2 2 1 CheR methyltransferase, SAM binding domain DREV PF05219.12 gi|15922502|ref|NP_378171.1| - 0.0054 15.9 0.1 0.0099 15.0 0.1 1.6 1 1 1 2 2 2 1 DREV methyltransferase MetW PF07021.12 gi|15922502|ref|NP_378171.1| - 0.011 15.3 0.1 0.018 14.6 0.1 1.3 1 0 0 1 1 1 0 Methionine biosynthesis protein MetW N6_N4_Mtase PF01555.18 gi|15922502|ref|NP_378171.1| - 0.012 15.4 0.1 0.37 10.5 0.0 2.3 2 1 0 2 2 2 0 DNA methylase Methyltransf_18 PF12847.7 gi|15922502|ref|NP_378171.1| - 0.019 14.9 0.0 0.04 13.8 0.0 1.5 1 0 0 1 1 1 0 Methyltransferase domain N2227 PF07942.12 gi|15922502|ref|NP_378171.1| - 0.03 13.5 0.7 1.3 8.2 0.0 3.0 2 1 1 3 3 3 0 N2227-like protein TPMT PF05724.11 gi|15922502|ref|NP_378171.1| - 0.086 12.5 0.0 0.13 11.9 0.0 1.3 1 0 0 1 1 1 0 Thiopurine S-methyltransferase (TPMT) Saf_2TM PF18303.1 gi|15922503|ref|NP_378172.1| - 1.2 8.8 7.0 0.12 12.0 2.5 1.6 2 0 0 2 2 2 0 SAVED-fused 2TM effector domain Lactamase_B PF00753.27 gi|15922504|ref|NP_378173.1| - 6.8e-15 55.6 0.1 1e-14 55.0 0.1 1.3 1 0 0 1 1 1 1 Metallo-beta-lactamase superfamily Rtt106_N PF18215.1 gi|15922504|ref|NP_378173.1| - 0.12 12.1 0.0 0.37 10.6 0.0 1.8 1 0 0 1 1 1 0 Histone chaperone Rtt106 N-terminal domain Rep_N PF08724.10 gi|15922505|ref|NP_378174.1| - 0.046 13.5 0.3 0.081 12.7 0.3 1.4 1 0 0 1 1 1 0 Rep protein catalytic domain like Lipoprotein_17 PF04200.12 gi|15922505|ref|NP_378174.1| - 5.3 7.5 11.4 0.68 10.3 4.4 2.8 1 1 1 2 2 2 0 Lipoprotein associated domain OCD_Mu_crystall PF02423.15 gi|15922506|ref|NP_378175.1| - 7.1e-42 143.4 0.1 1e-41 143.0 0.1 1.2 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family Shikimate_DH PF01488.20 gi|15922506|ref|NP_378175.1| - 0.0016 18.5 0.0 0.0034 17.4 0.0 1.5 1 1 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase 2-Hacid_dh_C PF02826.19 gi|15922506|ref|NP_378175.1| - 0.0029 17.0 0.0 0.0049 16.3 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Cob_adeno_trans PF01923.18 gi|15922507|ref|NP_378176.1| - 7e-47 159.6 0.0 7.9e-47 159.4 0.0 1.0 1 0 0 1 1 1 1 Cobalamin adenosyltransferase DDE_Tnp_2 PF04693.12 gi|15922509|ref|NP_378178.1| - 1.5e-178 593.0 3.7 1.7e-178 592.8 3.7 1.0 1 0 0 1 1 1 1 Archaeal putative transposase ISC1217 DDE_Tnp_1 PF01609.21 gi|15922509|ref|NP_378178.1| - 1.3e-06 28.3 0.0 2.2e-06 27.5 0.0 1.5 1 1 0 1 1 1 1 Transposase DDE domain HTH_20 PF12840.7 gi|15922509|ref|NP_378178.1| - 0.032 14.3 0.0 0.06 13.4 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_45 PF14947.6 gi|15922509|ref|NP_378178.1| - 0.041 13.9 0.7 0.19 11.7 0.1 2.3 2 0 0 2 2 2 0 Winged helix-turn-helix TrmB PF01978.19 gi|15922509|ref|NP_378178.1| - 0.057 13.3 0.0 0.15 11.9 0.0 1.7 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB EamA PF00892.20 gi|15922511|ref|NP_378180.1| - 1.2e-30 106.5 45.8 2.3e-17 63.5 18.5 2.3 2 0 0 2 2 2 2 EamA-like transporter family TPT PF03151.16 gi|15922511|ref|NP_378180.1| - 1e-07 31.6 17.5 1.7e-06 27.6 17.2 2.0 1 1 0 1 1 1 1 Triose-phosphate Transporter family NTP_transferase PF00483.23 gi|15922512|ref|NP_378181.1| - 1.3e-16 61.0 0.6 7e-15 55.3 0.6 2.2 1 1 0 1 1 1 1 Nucleotidyl transferase Hexapep PF00132.24 gi|15922512|ref|NP_378181.1| - 6.5e-14 51.0 0.7 3.8e-05 23.2 0.0 4.1 4 0 0 4 4 4 3 Bacterial transferase hexapeptide (six repeats) NTP_transf_3 PF12804.7 gi|15922512|ref|NP_378181.1| - 1.8e-08 34.9 0.0 2.2e-08 34.6 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep_2 PF14602.6 gi|15922512|ref|NP_378181.1| - 0.00037 20.2 0.6 0.14 11.9 0.0 3.4 3 0 0 3 3 3 1 Hexapeptide repeat of succinyl-transferase Glycos_transf_2 PF00535.26 gi|15922512|ref|NP_378181.1| - 0.012 15.4 0.0 0.018 14.8 0.0 1.3 1 0 0 1 1 1 0 Glycosyl transferase family 2 GHMP_kinases_N PF00288.26 gi|15922513|ref|NP_378182.1| - 1.2e-10 41.5 0.1 2.8e-10 40.3 0.1 1.7 1 0 0 1 1 1 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|15922513|ref|NP_378182.1| - 2e-08 34.5 0.1 8.5e-08 32.5 0.0 2.1 2 0 0 2 2 2 1 GHMP kinases C terminal Hexokinase_1 PF00349.21 gi|15922513|ref|NP_378182.1| - 0.017 15.0 0.0 0.03 14.2 0.0 1.4 1 0 0 1 1 1 0 Hexokinase DUF2972 PF11186.8 gi|15922513|ref|NP_378182.1| - 0.058 13.3 0.5 0.058 13.3 0.5 1.8 2 0 0 2 2 2 0 Protein of unknown function (DUF2972) DNA_primase_lrg PF04104.14 gi|15922513|ref|NP_378182.1| - 0.17 11.2 0.5 0.33 10.3 0.1 1.6 2 0 0 2 2 2 0 Eukaryotic and archaeal DNA primase, large subunit SIS PF01380.22 gi|15922514|ref|NP_378183.1| - 4.4e-49 165.7 2.4 3.3e-27 94.9 0.4 2.5 2 0 0 2 2 2 2 SIS domain GATase_6 PF13522.6 gi|15922514|ref|NP_378183.1| - 1e-21 77.5 0.0 1.9e-21 76.7 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 gi|15922514|ref|NP_378183.1| - 3.2e-19 69.0 0.0 6.6e-19 68.0 0.0 1.6 1 0 0 1 1 1 1 Glutamine amidotransferase domain SIS_2 PF13580.6 gi|15922514|ref|NP_378183.1| - 1.8e-05 24.8 0.7 0.0064 16.5 0.1 3.6 3 1 1 4 4 4 1 SIS domain GATase_4 PF13230.6 gi|15922514|ref|NP_378183.1| - 0.0054 15.7 0.0 0.01 14.7 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferases class-II LOR PF04525.12 gi|15922514|ref|NP_378183.1| - 0.12 12.0 0.0 0.56 9.8 0.0 1.9 2 0 0 2 2 2 0 LURP-one-related RGI1 PF10843.8 gi|15922514|ref|NP_378183.1| - 0.12 12.0 0.2 7.7 6.1 0.0 2.3 2 0 0 2 2 2 0 Respiratory growth induced protein 1 HGTP_anticodon PF03129.20 gi|15922515|ref|NP_378184.1| - 5e-14 52.2 0.3 1e-13 51.3 0.3 1.5 1 0 0 1 1 1 1 Anticodon binding domain Beta-Casp PF10996.8 gi|15922516|ref|NP_378185.1| - 2.4e-17 63.2 0.0 5.7e-17 62.0 0.0 1.6 1 0 0 1 1 1 1 Beta-Casp domain RMMBL PF07521.12 gi|15922516|ref|NP_378185.1| - 1.8e-14 53.4 0.1 3.7e-14 52.4 0.1 1.6 1 0 0 1 1 1 1 Zn-dependent metallo-hydrolase RNA specificity domain Lactamase_B_6 PF16661.5 gi|15922516|ref|NP_378185.1| - 1.5e-10 40.8 0.0 5.2e-10 39.1 0.0 1.8 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|15922516|ref|NP_378185.1| - 1e-07 31.7 0.0 2.1e-07 30.6 0.0 1.5 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|15922516|ref|NP_378185.1| - 1.1e-05 25.5 0.3 7.6e-05 22.8 0.3 2.2 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily PDEase_II PF02112.15 gi|15922516|ref|NP_378185.1| - 0.0014 17.8 0.0 0.0025 17.0 0.0 1.3 1 0 0 1 1 1 1 cAMP phosphodiesterases class-II Lactamase_B_3 PF13483.6 gi|15922516|ref|NP_378185.1| - 0.0029 17.5 0.0 0.0059 16.5 0.0 1.4 1 0 0 1 1 1 1 Beta-lactamase superfamily domain CheB_methylest PF01339.17 gi|15922516|ref|NP_378185.1| - 0.0053 16.5 0.1 0.022 14.5 0.1 1.9 2 0 0 2 2 2 1 CheB methylesterase GrlR PF16518.5 gi|15922516|ref|NP_378185.1| - 0.068 13.1 0.0 0.24 11.4 0.0 1.9 2 0 0 2 2 2 0 T3SS negative regulator,GrlR NAC PF01849.18 gi|15922517|ref|NP_378186.1| - 6.6e-10 38.8 0.2 6.6e-10 38.8 0.2 1.9 3 0 0 3 3 3 1 NAC domain DUF1978 PF09321.10 gi|15922517|ref|NP_378186.1| - 0.023 14.0 3.2 0.032 13.5 3.0 1.3 1 1 0 1 1 1 0 Domain of unknown function (DUF1978) HTH_3 PF01381.22 gi|15922518|ref|NP_378187.1| - 1.1e-12 47.8 0.1 2.1e-12 46.9 0.1 1.4 1 0 0 1 1 1 1 Helix-turn-helix HTH_31 PF13560.6 gi|15922518|ref|NP_378187.1| - 7.2e-08 32.7 0.0 1.2e-07 31.9 0.0 1.3 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_19 PF12844.7 gi|15922518|ref|NP_378187.1| - 4.4e-07 29.8 0.1 8e-07 29.0 0.1 1.5 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_37 PF13744.6 gi|15922518|ref|NP_378187.1| - 0.1 12.6 0.0 0.19 11.7 0.0 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_25 PF13413.6 gi|15922518|ref|NP_378187.1| - 0.11 12.3 0.1 0.22 11.4 0.1 1.5 1 0 0 1 1 1 0 Helix-turn-helix domain MazE_antitoxin PF04014.18 gi|15922519|ref|NP_378188.1| - 6.6e-13 48.2 1.3 1.1e-12 47.5 1.3 1.4 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin AbrB-like PF14250.6 gi|15922519|ref|NP_378188.1| - 0.0013 18.8 0.2 0.0018 18.3 0.2 1.3 1 0 0 1 1 1 1 AbrB-like transcriptional regulator DUF1905 PF08922.11 gi|15922519|ref|NP_378188.1| - 0.0068 16.5 0.5 0.064 13.3 0.1 2.0 2 0 0 2 2 2 1 Domain of unknown function (DUF1905) CDC48_N PF02359.18 gi|15922519|ref|NP_378188.1| - 0.027 14.6 0.1 0.045 13.9 0.1 1.4 1 0 0 1 1 1 0 Cell division protein 48 (CDC48), N-terminal domain DUF3006 PF11213.8 gi|15922519|ref|NP_378188.1| - 0.092 13.0 3.7 0.86 9.9 3.7 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF3006) PIN PF01850.21 gi|15922520|ref|NP_378189.1| - 4.1e-13 49.9 0.2 4.8e-13 49.7 0.2 1.0 1 0 0 1 1 1 1 PIN domain DUF4411 PF14367.6 gi|15922520|ref|NP_378189.1| - 5.1e-05 23.2 0.1 5.6e-05 23.1 0.1 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF4411) Glycos_transf_1 PF00534.20 gi|15922521|ref|NP_378190.1| - 1.4e-24 86.5 0.1 3.7e-24 85.2 0.1 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|15922521|ref|NP_378190.1| - 3.8e-19 69.5 0.0 5.9e-19 68.8 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_2 PF13524.6 gi|15922521|ref|NP_378190.1| - 5.5e-05 23.5 0.0 0.00015 22.1 0.0 1.7 1 0 0 1 1 1 1 Glycosyl transferases group 1 Acetyltransf_11 PF13720.6 gi|15922521|ref|NP_378190.1| - 0.11 13.0 0.2 0.97 9.9 0.1 2.4 2 0 0 2 2 2 0 Udp N-acetylglucosamine O-acyltransferase; Domain 2 Glycos_transf_2 PF00535.26 gi|15922522|ref|NP_378191.1| - 6.1e-17 62.0 0.4 9.8e-17 61.3 0.4 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|15922522|ref|NP_378191.1| - 7.2e-08 32.6 0.0 1.2e-07 31.9 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 YtkA PF13115.6 gi|15922523|ref|NP_378192.1| - 2.3e-06 28.1 0.1 0.0024 18.4 0.0 2.9 2 0 0 2 2 2 2 YtkA-like bMG3 PF11974.8 gi|15922523|ref|NP_378192.1| - 0.0013 18.8 0.0 0.0027 17.7 0.0 1.5 1 0 0 1 1 1 1 Bacterial alpha-2-macroglobulin MG3 domain CarbopepD_reg_2 PF13715.6 gi|15922523|ref|NP_378192.1| - 0.0053 16.7 0.9 0.0053 16.7 0.9 4.9 4 1 0 4 4 4 1 CarboxypepD_reg-like domain Big_1 PF02369.16 gi|15922523|ref|NP_378192.1| - 0.0054 16.7 2.5 0.0054 16.7 2.5 4.9 3 0 0 3 3 2 1 Bacterial Ig-like domain (group 1) UN_NPL4 PF11543.8 gi|15922523|ref|NP_378192.1| - 0.13 12.8 0.0 1 9.9 0.0 2.6 2 1 0 2 2 1 0 Nuclear pore localisation protein NPL4 Alpha_GJ PF03229.13 gi|15922523|ref|NP_378192.1| - 0.26 11.9 11.6 0.82 10.2 11.6 1.9 1 0 0 1 1 1 0 Alphavirus glycoprotein J PepSY PF03413.19 gi|15922523|ref|NP_378192.1| - 0.46 11.1 2.7 2.7 8.6 0.0 3.3 3 0 0 3 3 3 0 Peptidase propeptide and YPEB domain RIFIN PF02009.16 gi|15922523|ref|NP_378192.1| - 1.6 8.5 5.8 2.7 7.8 5.8 1.3 1 0 0 1 1 1 0 Rifin Filamin PF00630.19 gi|15922523|ref|NP_378192.1| - 1.7 9.5 6.2 0.97 10.3 0.6 3.3 2 2 0 2 2 2 0 Filamin/ABP280 repeat TMEM154 PF15102.6 gi|15922523|ref|NP_378192.1| - 4.9 7.0 17.5 18 5.2 17.5 2.0 1 0 0 1 1 1 0 TMEM154 protein family DUF1180 PF06679.12 gi|15922523|ref|NP_378192.1| - 6.3 7.2 7.4 18 5.7 7.4 1.8 1 0 0 1 1 1 0 Protein of unknown function (DUF1180) CarboxypepD_reg PF13620.6 gi|15922525|ref|NP_378194.1| - 1.1e-08 35.2 1.8 1.1e-08 35.2 1.8 4.3 2 1 1 3 3 3 1 Carboxypeptidase regulatory-like domain ATG16 PF08614.11 gi|15922525|ref|NP_378194.1| - 9.5e-08 32.5 0.1 1.3e-07 32.0 0.1 1.1 1 0 0 1 1 1 1 Autophagy protein 16 (ATG16) ADIP PF11559.8 gi|15922525|ref|NP_378194.1| - 9e-07 29.1 3.2 3e-06 27.4 3.2 1.7 1 1 0 1 1 1 1 Afadin- and alpha -actinin-Binding DUF1664 PF07889.12 gi|15922525|ref|NP_378194.1| - 1e-06 28.8 4.3 4.8e-06 26.6 3.1 2.2 1 1 1 2 2 2 2 Protein of unknown function (DUF1664) SlyX PF04102.12 gi|15922525|ref|NP_378194.1| - 4.6e-06 27.1 0.0 0.012 16.2 0.0 2.3 2 0 0 2 2 2 1 SlyX TMF_DNA_bd PF12329.8 gi|15922525|ref|NP_378194.1| - 8.6e-06 25.7 7.3 0.00049 20.0 2.1 2.3 1 1 1 2 2 2 1 TATA element modulatory factor 1 DNA binding DUF3450 PF11932.8 gi|15922525|ref|NP_378194.1| - 4.8e-05 22.8 0.8 0.00013 21.4 0.8 1.7 1 1 0 1 1 1 1 Protein of unknown function (DUF3450) Spc7 PF08317.11 gi|15922525|ref|NP_378194.1| - 5.1e-05 22.3 0.1 7.6e-05 21.7 0.1 1.2 1 0 0 1 1 1 1 Spc7 kinetochore protein Big_1 PF02369.16 gi|15922525|ref|NP_378194.1| - 5.3e-05 23.1 1.4 5.3e-05 23.1 1.4 5.5 6 0 0 6 6 3 1 Bacterial Ig-like domain (group 1) CENP-F_leu_zip PF10473.9 gi|15922525|ref|NP_378194.1| - 6e-05 23.1 3.9 0.00015 21.8 3.9 1.5 1 1 0 1 1 1 1 Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 AAA_13 PF13166.6 gi|15922525|ref|NP_378194.1| - 0.00025 19.9 0.4 0.00037 19.3 0.4 1.1 1 0 0 1 1 1 1 AAA domain LPP PF04728.13 gi|15922525|ref|NP_378194.1| - 0.00029 21.2 13.7 0.012 15.9 1.0 3.8 1 1 3 4 4 4 1 Lipoprotein leucine-zipper MscS_porin PF12795.7 gi|15922525|ref|NP_378194.1| - 0.00032 20.3 3.4 0.00046 19.8 3.4 1.1 1 0 0 1 1 1 1 Mechanosensitive ion channel porin domain BRE1 PF08647.11 gi|15922525|ref|NP_378194.1| - 0.00036 20.5 1.7 0.00059 19.9 1.7 1.3 1 0 0 1 1 1 1 BRE1 E3 ubiquitin ligase TolA_bind_tri PF16331.5 gi|15922525|ref|NP_378194.1| - 0.00041 20.4 0.8 0.025 14.7 0.0 2.2 1 1 1 2 2 2 1 TolA binding protein trimerisation Invasin_D3 PF09134.10 gi|15922525|ref|NP_378194.1| - 0.00042 20.6 2.3 0.00042 20.6 2.3 5.2 1 1 4 5 5 3 1 Invasin, domain 3 NPV_P10 PF05531.12 gi|15922525|ref|NP_378194.1| - 0.00048 20.5 6.9 0.43 11.1 3.4 2.4 1 1 1 2 2 2 2 Nucleopolyhedrovirus P10 protein Bacillus_HBL PF05791.11 gi|15922525|ref|NP_378194.1| - 0.00049 20.0 2.6 0.00085 19.2 2.6 1.3 1 0 0 1 1 1 1 Bacillus haemolytic enterotoxin (HBL) ZapB PF06005.12 gi|15922525|ref|NP_378194.1| - 0.0005 20.4 0.4 0.21 12.0 0.2 2.3 1 1 1 2 2 2 1 Cell division protein ZapB EzrA PF06160.12 gi|15922525|ref|NP_378194.1| - 0.00069 17.9 0.9 0.00069 17.9 0.9 1.5 2 0 0 2 2 1 1 Septation ring formation regulator, EzrA bMG3 PF11974.8 gi|15922525|ref|NP_378194.1| - 0.0007 19.6 0.1 0.0032 17.5 0.1 2.2 2 0 0 2 2 1 1 Bacterial alpha-2-macroglobulin MG3 domain Baculo_PEP_C PF04513.12 gi|15922525|ref|NP_378194.1| - 0.00074 19.6 20.8 0.00074 19.6 20.8 2.6 2 1 1 3 3 2 1 Baculovirus polyhedron envelope protein, PEP, C terminus DUF5082 PF16888.5 gi|15922525|ref|NP_378194.1| - 0.0011 19.2 10.3 0.15 12.3 3.3 3.0 1 1 2 3 3 3 2 Domain of unknown function (DUF5082) Laminin_II PF06009.12 gi|15922525|ref|NP_378194.1| - 0.0015 18.5 7.9 0.0027 17.7 4.1 2.2 1 1 1 2 2 2 1 Laminin Domain II Lzipper-MIP1 PF14389.6 gi|15922525|ref|NP_378194.1| - 0.0016 18.7 1.7 6.7 7.1 0.1 3.1 1 1 2 3 3 3 0 Leucine-zipper of ternary complex factor MIP1 Lebercilin PF15619.6 gi|15922525|ref|NP_378194.1| - 0.0018 18.0 0.3 0.0037 17.0 0.2 1.3 1 1 0 1 1 1 1 Ciliary protein causing Leber congenital amaurosis disease DUF16 PF01519.16 gi|15922525|ref|NP_378194.1| - 0.0019 18.6 1.7 0.042 14.3 1.4 2.2 1 1 1 2 2 2 1 Protein of unknown function DUF16 DUF4988 PF16378.5 gi|15922525|ref|NP_378194.1| - 0.002 17.8 6.5 0.46 10.1 0.0 3.6 2 1 2 4 4 3 1 Domain of unknown function IFT57 PF10498.9 gi|15922525|ref|NP_378194.1| - 0.002 17.1 3.6 0.0029 16.7 3.6 1.1 1 0 0 1 1 1 1 Intra-flagellar transport protein 57 DUF724 PF05266.14 gi|15922525|ref|NP_378194.1| - 0.0022 17.9 0.2 0.0037 17.1 0.2 1.3 1 0 0 1 1 1 1 Protein of unknown function (DUF724) Filament PF00038.21 gi|15922525|ref|NP_378194.1| - 0.0023 17.6 0.4 0.0045 16.6 0.4 1.4 1 0 0 1 1 1 1 Intermediate filament protein Tektin PF03148.14 gi|15922525|ref|NP_378194.1| - 0.0024 16.7 2.5 0.0065 15.3 0.7 1.9 1 1 1 2 2 2 1 Tektin family FlaC_arch PF05377.11 gi|15922525|ref|NP_378194.1| - 0.0026 18.1 10.6 0.055 13.9 3.8 3.6 1 1 2 3 3 3 1 Flagella accessory protein C (FlaC) FPP PF05911.11 gi|15922525|ref|NP_378194.1| - 0.0028 15.9 1.8 0.0037 15.5 1.8 1.1 1 0 0 1 1 1 1 Filament-like plant protein, long coiled-coil BST2 PF16716.5 gi|15922525|ref|NP_378194.1| - 0.0028 18.2 5.0 0.059 14.0 2.5 2.3 1 1 1 2 2 2 2 Bone marrow stromal antigen 2 TMPIT PF07851.13 gi|15922525|ref|NP_378194.1| - 0.0032 16.8 0.1 0.0054 16.0 0.1 1.3 1 0 0 1 1 1 1 TMPIT-like protein EMP24_GP25L PF01105.24 gi|15922525|ref|NP_378194.1| - 0.0032 17.4 3.3 0.96 9.4 0.4 2.7 1 1 1 2 2 2 1 emp24/gp25L/p24 family/GOLD zf-C4H2 PF10146.9 gi|15922525|ref|NP_378194.1| - 0.0035 17.7 0.1 0.0055 17.0 0.1 1.2 1 0 0 1 1 1 1 Zinc finger-containing protein APG6_N PF17675.1 gi|15922525|ref|NP_378194.1| - 0.0043 17.6 0.0 0.0067 17.0 0.0 1.2 1 0 0 1 1 1 1 Apg6 coiled-coil region Prominin PF05478.11 gi|15922525|ref|NP_378194.1| - 0.0048 14.9 2.5 0.007 14.4 2.5 1.2 1 0 0 1 1 1 1 Prominin MAD PF05557.13 gi|15922525|ref|NP_378194.1| - 0.0049 15.3 0.7 0.0071 14.8 0.7 1.1 1 0 0 1 1 1 1 Mitotic checkpoint protein FAM76 PF16046.5 gi|15922525|ref|NP_378194.1| - 0.0052 16.2 0.5 0.0069 15.8 0.5 1.1 1 0 0 1 1 1 1 FAM76 protein Fez1 PF06818.15 gi|15922525|ref|NP_378194.1| - 0.0055 17.2 0.3 0.0082 16.6 0.3 1.2 1 0 0 1 1 1 1 Fez1 Tropomyosin_1 PF12718.7 gi|15922525|ref|NP_378194.1| - 0.0055 16.9 0.7 0.11 12.7 0.1 2.0 1 1 1 2 2 2 1 Tropomyosin like ApoO PF09769.9 gi|15922525|ref|NP_378194.1| - 0.0057 16.6 0.5 0.0057 16.6 0.5 2.9 2 1 1 3 3 2 1 Apolipoprotein O Fib_alpha PF08702.10 gi|15922525|ref|NP_378194.1| - 0.0059 16.8 6.9 0.046 13.9 6.4 2.1 1 1 1 2 2 2 2 Fibrinogen alpha/beta chain family KASH_CCD PF14662.6 gi|15922525|ref|NP_378194.1| - 0.0059 16.5 1.3 0.0089 15.9 1.3 1.2 1 0 0 1 1 1 1 Coiled-coil region of CCDC155 or KASH BLOC1_2 PF10046.9 gi|15922525|ref|NP_378194.1| - 0.0062 16.8 5.6 0.024 14.9 3.6 2.3 1 1 0 1 1 1 1 Biogenesis of lysosome-related organelles complex-1 subunit 2 COG2 PF06148.11 gi|15922525|ref|NP_378194.1| - 0.0064 16.6 4.2 0.04 14.0 1.1 2.2 1 1 1 2 2 2 1 COG (conserved oligomeric Golgi) complex component, COG2 RasGAP_C PF03836.15 gi|15922525|ref|NP_378194.1| - 0.0069 16.5 3.5 0.084 13.0 0.1 2.2 1 1 1 2 2 2 1 RasGAP C-terminus TMF_TATA_bd PF12325.8 gi|15922525|ref|NP_378194.1| - 0.007 16.6 5.5 0.97 9.7 1.7 2.2 1 1 1 2 2 2 1 TATA element modulatory factor 1 TATA binding Pox_F11 PF04943.12 gi|15922525|ref|NP_378194.1| - 0.0072 15.5 0.5 0.01 14.9 0.5 1.1 1 0 0 1 1 1 1 Poxvirus F11 protein DivIC PF04977.15 gi|15922525|ref|NP_378194.1| - 0.0077 16.0 0.1 3.6 7.4 0.0 2.6 1 1 2 3 3 3 0 Septum formation initiator ABC_tran_CTD PF16326.5 gi|15922525|ref|NP_378194.1| - 0.0081 16.4 0.0 0.94 9.8 0.0 2.3 1 1 1 2 2 2 1 ABC transporter C-terminal domain Cluap1 PF10234.9 gi|15922525|ref|NP_378194.1| - 0.0081 15.6 0.4 0.013 15.0 0.4 1.2 1 0 0 1 1 1 1 Clusterin-associated protein-1 FapA PF03961.13 gi|15922525|ref|NP_378194.1| - 0.0086 14.7 0.3 0.019 13.6 0.3 1.6 1 0 0 1 1 1 1 Flagellar Assembly Protein A PEGA PF08308.11 gi|15922525|ref|NP_378194.1| - 0.0087 15.9 0.0 0.0087 15.9 0.0 3.4 3 0 0 3 3 1 1 PEGA domain HMMR_N PF15905.5 gi|15922525|ref|NP_378194.1| - 0.01 15.4 1.3 0.016 14.7 1.3 1.2 1 0 0 1 1 1 0 Hyaluronan mediated motility receptor N-terminal SHE3 PF17078.5 gi|15922525|ref|NP_378194.1| - 0.01 15.6 3.5 0.01 15.6 2.3 1.6 2 0 0 2 2 1 0 SWI5-dependent HO expression protein 3 DUF2730 PF10805.8 gi|15922525|ref|NP_378194.1| - 0.01 15.9 1.6 0.01 15.9 1.6 2.3 2 1 0 2 2 1 0 Protein of unknown function (DUF2730) HemX PF04375.14 gi|15922525|ref|NP_378194.1| - 0.011 15.1 0.5 0.018 14.4 0.5 1.3 1 0 0 1 1 1 0 HemX, putative uroporphyrinogen-III C-methyltransferase CALCOCO1 PF07888.11 gi|15922525|ref|NP_378194.1| - 0.011 14.7 0.5 0.015 14.2 0.5 1.1 1 0 0 1 1 1 0 Calcium binding and coiled-coil domain (CALCOCO1) like COG5 PF10392.9 gi|15922525|ref|NP_378194.1| - 0.011 15.9 12.1 0.087 13.0 6.7 2.2 1 1 2 3 3 3 0 Golgi transport complex subunit 5 DUF3584 PF12128.8 gi|15922525|ref|NP_378194.1| - 0.013 13.1 0.2 0.017 12.7 0.2 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3584) Atg14 PF10186.9 gi|15922525|ref|NP_378194.1| - 0.013 14.6 0.8 0.018 14.1 0.8 1.1 1 0 0 1 1 1 0 Vacuolar sorting 38 and autophagy-related subunit 14 V_ATPase_I PF01496.19 gi|15922525|ref|NP_378194.1| - 0.013 13.4 0.5 0.019 13.0 0.5 1.1 1 0 0 1 1 1 0 V-type ATPase 116kDa subunit family XhlA PF10779.9 gi|15922525|ref|NP_378194.1| - 0.013 15.7 3.6 0.2 11.9 0.0 3.1 2 1 1 3 3 2 0 Haemolysin XhlA Myosin_tail_1 PF01576.19 gi|15922525|ref|NP_378194.1| - 0.016 13.0 0.6 0.022 12.6 0.6 1.0 1 0 0 1 1 1 0 Myosin tail Csm1_N PF18504.1 gi|15922525|ref|NP_378194.1| - 0.017 15.4 4.4 6.3 7.2 0.5 3.1 1 1 2 3 3 3 0 Csm1 N-terminal domain TPR_MLP1_2 PF07926.12 gi|15922525|ref|NP_378194.1| - 0.018 15.1 1.9 0.043 13.9 1.9 1.6 1 1 0 1 1 1 0 TPR/MLP1/MLP2-like protein DUF4618 PF15397.6 gi|15922525|ref|NP_378194.1| - 0.018 14.5 2.7 2.3 7.6 0.3 2.1 1 1 1 2 2 2 0 Domain of unknown function (DUF4618) YabA PF06156.13 gi|15922525|ref|NP_378194.1| - 0.018 15.7 2.1 1.4 9.6 0.6 2.3 1 1 1 2 2 2 0 Initiation control protein YabA Tropomyosin PF00261.20 gi|15922525|ref|NP_378194.1| - 0.019 14.4 0.1 0.032 13.6 0.1 1.2 1 0 0 1 1 1 0 Tropomyosin Prefoldin_2 PF01920.20 gi|15922525|ref|NP_378194.1| - 0.019 14.9 1.8 1.7 8.6 0.1 2.8 1 1 2 3 3 3 0 Prefoldin subunit MG2 PF01835.19 gi|15922525|ref|NP_378194.1| - 0.019 15.4 0.4 1.6 9.2 0.1 3.2 2 1 0 2 2 2 0 MG2 domain PI3K_P85_iSH2 PF16454.5 gi|15922525|ref|NP_378194.1| - 0.021 14.4 0.4 0.047 13.3 0.2 1.5 1 1 0 1 1 1 0 Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain CCDC-167 PF15188.6 gi|15922525|ref|NP_378194.1| - 0.022 15.1 1.4 0.19 12.1 0.2 2.3 1 1 1 2 2 2 0 Coiled-coil domain-containing protein 167 Vps52 PF04129.12 gi|15922525|ref|NP_378194.1| - 0.023 13.4 2.1 0.036 12.8 2.1 1.3 1 0 0 1 1 1 0 Vps52 / Sac2 family Macoilin PF09726.9 gi|15922525|ref|NP_378194.1| - 0.025 13.2 0.2 0.035 12.7 0.2 1.2 1 0 0 1 1 1 0 Macoilin family MCPsignal PF00015.21 gi|15922525|ref|NP_378194.1| - 0.027 14.3 8.5 0.054 13.3 8.5 1.5 1 0 0 1 1 1 0 Methyl-accepting chemotaxis protein (MCP) signalling domain Golgin_A5 PF09787.9 gi|15922525|ref|NP_378194.1| - 0.027 13.9 1.0 0.04 13.4 1.0 1.1 1 0 0 1 1 1 0 Golgin subfamily A member 5 Laminin_I PF06008.14 gi|15922525|ref|NP_378194.1| - 0.028 14.1 5.9 0.084 12.6 5.9 1.6 1 1 0 1 1 1 0 Laminin Domain I Wtap PF17098.5 gi|15922525|ref|NP_378194.1| - 0.028 14.3 0.1 0.043 13.7 0.1 1.3 1 0 0 1 1 1 0 WTAP/Mum2p family DUF812 PF05667.11 gi|15922525|ref|NP_378194.1| - 0.031 13.2 3.6 0.064 12.1 3.6 1.4 1 1 0 1 1 1 0 Protein of unknown function (DUF812) Seryl_tRNA_N PF02403.22 gi|15922525|ref|NP_378194.1| - 0.031 14.5 0.6 0.57 10.4 0.2 2.1 1 1 1 2 2 2 0 Seryl-tRNA synthetase N-terminal domain DUF4686 PF15742.5 gi|15922525|ref|NP_378194.1| - 0.033 13.3 1.0 0.046 12.8 1.0 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4686) Gp5_C PF06715.12 gi|15922525|ref|NP_378194.1| - 0.034 14.3 1.9 0.075 13.2 0.1 2.7 2 0 0 2 2 1 0 Gp5 C-terminal repeat (3 copies) DUF773 PF05600.12 gi|15922525|ref|NP_378194.1| - 0.034 12.9 2.3 0.054 12.2 2.3 1.2 1 0 0 1 1 1 0 CDK5 regulatory subunit-associated protein 3 CREPT PF16566.5 gi|15922525|ref|NP_378194.1| - 0.035 14.3 0.7 0.063 13.4 0.7 1.4 1 0 0 1 1 1 0 Cell-cycle alteration and expression-elevated protein in tumour HlyE PF06109.13 gi|15922525|ref|NP_378194.1| - 0.04 13.2 3.1 0.25 10.6 0.3 2.3 1 1 1 2 2 2 0 Haemolysin E (HlyE) bZIP_1 PF00170.21 gi|15922525|ref|NP_378194.1| - 0.044 13.9 3.7 8.2 6.6 0.1 2.9 1 1 1 3 3 3 0 bZIP transcription factor Nup54 PF13874.6 gi|15922525|ref|NP_378194.1| - 0.044 13.9 0.1 0.071 13.2 0.1 1.2 1 0 0 1 1 1 0 Nucleoporin complex subunit 54 Cep57_CLD_2 PF14197.6 gi|15922525|ref|NP_378194.1| - 0.054 13.6 1.0 0.12 12.4 1.0 1.6 1 0 0 1 1 1 0 Centrosome localisation domain of PPC89 HAP1_N PF04849.13 gi|15922525|ref|NP_378194.1| - 0.054 12.7 0.7 0.1 11.8 0.7 1.4 1 0 0 1 1 1 0 HAP1 N-terminal conserved region DUF4140 PF13600.6 gi|15922525|ref|NP_378194.1| - 0.056 13.9 0.3 1.6 9.2 0.1 3.0 2 1 0 2 2 1 0 N-terminal domain of unknown function (DUF4140) DUF4795 PF16043.5 gi|15922525|ref|NP_378194.1| - 0.065 12.8 4.2 1.1 8.9 4.2 2.0 1 1 0 1 1 1 0 Domain of unknown function (DUF4795) DUF641 PF04859.12 gi|15922525|ref|NP_378194.1| - 0.067 13.5 1.2 3.1 8.1 0.1 2.2 1 1 1 2 2 2 0 Plant protein of unknown function (DUF641) HOOK PF05622.12 gi|15922525|ref|NP_378194.1| - 0.069 11.3 0.9 0.096 10.8 0.9 1.0 1 0 0 1 1 1 0 HOOK protein Apolipoprotein PF01442.18 gi|15922525|ref|NP_378194.1| - 0.07 13.0 0.2 0.15 11.9 0.2 1.5 1 1 0 1 1 1 0 Apolipoprotein A1/A4/E domain AIP3 PF03915.13 gi|15922525|ref|NP_378194.1| - 0.076 12.1 1.3 0.1 11.6 1.3 1.1 1 0 0 1 1 1 0 Actin interacting protein 3 DUF4201 PF13870.6 gi|15922525|ref|NP_378194.1| - 0.08 12.7 0.4 0.12 12.1 0.4 1.1 1 0 0 1 1 1 0 Domain of unknown function (DUF4201) APG17 PF04108.12 gi|15922525|ref|NP_378194.1| - 0.084 12.0 4.4 0.12 11.5 4.4 1.2 1 0 0 1 1 1 0 Autophagy protein Apg17 PspA_IM30 PF04012.12 gi|15922525|ref|NP_378194.1| - 0.085 12.4 0.3 0.34 10.5 0.2 1.7 1 1 0 1 1 1 0 PspA/IM30 family DegQ PF08181.11 gi|15922525|ref|NP_378194.1| - 0.086 12.9 1.7 5.6 7.1 0.1 2.3 2 0 0 2 2 2 0 DegQ (SacQ) family GAS PF13851.6 gi|15922525|ref|NP_378194.1| - 0.098 12.0 0.1 0.15 11.4 0.1 1.2 1 0 0 1 1 1 0 Growth-arrest specific micro-tubule binding DUF489 PF04356.12 gi|15922525|ref|NP_378194.1| - 0.099 12.6 0.8 0.2 11.7 0.8 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF489) Mod_r PF07200.13 gi|15922525|ref|NP_378194.1| - 0.1 12.7 2.0 0.16 12.1 2.0 1.2 1 0 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein CENP-Q PF13094.6 gi|15922525|ref|NP_378194.1| - 0.1 12.8 0.4 0.22 11.7 0.4 1.5 1 1 0 1 1 1 0 CENP-Q, a CENPA-CAD centromere complex subunit Dynamitin PF04912.14 gi|15922525|ref|NP_378194.1| - 0.11 11.9 5.1 0.21 10.9 5.1 1.3 1 1 0 1 1 1 0 Dynamitin TRAF_BIRC3_bd PF16673.5 gi|15922525|ref|NP_378194.1| - 0.11 12.3 2.6 0.66 9.8 0.6 2.7 2 1 0 2 2 2 0 TNF receptor-associated factor BIRC3 binding domain Fmp27_WPPW PF10359.9 gi|15922525|ref|NP_378194.1| - 0.11 11.3 0.4 0.16 10.8 0.4 1.1 1 0 0 1 1 1 0 RNA pol II promoter Fmp27 protein domain MIS13 PF08202.11 gi|15922525|ref|NP_378194.1| - 0.11 11.7 2.8 0.16 11.2 2.8 1.1 1 0 0 1 1 1 0 Mis12-Mtw1 protein family Allexi_40kDa PF05549.11 gi|15922525|ref|NP_378194.1| - 0.12 11.9 5.4 0.2 11.2 5.4 1.3 1 0 0 1 1 1 0 Allexivirus 40kDa protein WEMBL PF05701.11 gi|15922525|ref|NP_378194.1| - 0.13 11.0 2.9 0.18 10.4 2.9 1.1 1 0 0 1 1 1 0 Weak chloroplast movement under blue light Swi5 PF07061.11 gi|15922525|ref|NP_378194.1| - 0.14 12.3 2.2 4.3 7.5 0.5 2.5 1 1 1 2 2 2 0 Swi5 Snapin_Pallidin PF14712.6 gi|15922525|ref|NP_378194.1| - 0.14 12.6 3.5 1.8 9.0 3.5 2.2 1 1 0 1 1 1 0 Snapin/Pallidin HAUS-augmin3 PF14932.6 gi|15922525|ref|NP_378194.1| - 0.14 11.7 1.4 0.21 11.1 1.4 1.2 1 0 0 1 1 1 0 HAUS augmin-like complex subunit 3 Uso1_p115_C PF04871.13 gi|15922525|ref|NP_378194.1| - 0.17 12.3 1.1 0.28 11.6 1.1 1.3 1 0 0 1 1 1 0 Uso1 / p115 like vesicle tethering protein, C terminal region CLZ PF16526.5 gi|15922525|ref|NP_378194.1| - 0.19 12.1 1.4 16 6.0 0.1 2.5 1 1 1 2 2 2 0 C-terminal leucine zipper domain of cyclic nucleotide-gated channels MotA_ExbB PF01618.16 gi|15922525|ref|NP_378194.1| - 0.2 11.4 6.1 0.091 12.5 2.3 2.5 1 1 1 2 2 1 0 MotA/TolQ/ExbB proton channel family GCN5L1 PF06320.13 gi|15922525|ref|NP_378194.1| - 0.2 11.8 1.0 4.2 7.6 0.5 2.2 1 1 1 2 2 2 0 GCN5-like protein 1 (GCN5L1) DUF4472 PF14739.6 gi|15922525|ref|NP_378194.1| - 0.21 12.4 1.1 0.32 11.7 1.1 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4472) DUF713 PF05218.14 gi|15922525|ref|NP_378194.1| - 0.25 11.1 1.9 0.55 10.0 1.0 1.5 1 1 0 1 1 1 0 Protein of unknown function (DUF713) Vps51 PF08700.11 gi|15922525|ref|NP_378194.1| - 0.25 11.4 10.2 0.39 10.8 4.8 3.1 1 1 1 2 2 2 0 Vps51/Vps67 Gp58 PF07902.11 gi|15922525|ref|NP_378194.1| - 0.25 9.6 11.8 0.41 8.9 10.2 1.8 1 1 1 2 2 2 0 gp58-like protein V-SNARE PF05008.15 gi|15922525|ref|NP_378194.1| - 0.26 11.7 0.5 0.51 10.7 0.4 1.5 1 1 0 1 1 1 0 Vesicle transport v-SNARE protein N-terminus Vps53_N PF04100.12 gi|15922525|ref|NP_378194.1| - 0.27 10.1 3.3 0.41 9.6 3.3 1.1 1 0 0 1 1 1 0 Vps53-like, N-terminal HIP1_clath_bdg PF16515.5 gi|15922525|ref|NP_378194.1| - 0.28 11.8 5.3 2.3 8.9 5.3 2.0 1 1 0 1 1 1 0 Clathrin-binding domain of Huntingtin-interacting protein 1 SKA1 PF07160.12 gi|15922525|ref|NP_378194.1| - 0.31 10.9 3.2 2 8.2 3.5 1.8 1 1 0 1 1 1 0 Spindle and kinetochore-associated protein 1 Spc24 PF08286.11 gi|15922525|ref|NP_378194.1| - 0.33 11.2 5.7 6.6 7.0 1.6 2.8 2 1 1 3 3 2 0 Spc24 subunit of Ndc80 COG6 PF06419.11 gi|15922525|ref|NP_378194.1| - 0.39 8.9 7.1 0.37 9.0 1.9 1.8 1 1 1 2 2 2 0 Conserved oligomeric complex COG6 BAR_3 PF16746.5 gi|15922525|ref|NP_378194.1| - 0.45 10.2 3.5 1.4 8.6 3.5 1.7 1 1 0 1 1 1 0 BAR domain of APPL family LXG PF04740.12 gi|15922525|ref|NP_378194.1| - 0.47 10.1 8.4 3.5 7.3 8.3 2.4 1 1 1 2 2 2 0 LXG domain of WXG superfamily End3 PF12761.7 gi|15922525|ref|NP_378194.1| - 0.64 10.2 3.7 5.5 7.1 0.3 2.6 1 1 2 3 3 3 0 Actin cytoskeleton-regulatory complex protein END3 Noelin-1 PF12308.8 gi|15922525|ref|NP_378194.1| - 0.64 10.0 3.0 1.6 8.8 1.3 2.3 1 1 1 2 2 2 0 Neurogenesis glycoprotein LegC3_N PF18654.1 gi|15922525|ref|NP_378194.1| - 0.66 9.2 4.1 1 8.6 4.1 1.1 1 0 0 1 1 1 0 LegC3 N-terminal coiled-coil domain Syntaxin-6_N PF09177.11 gi|15922525|ref|NP_378194.1| - 0.72 10.4 5.9 1.7 9.3 5.9 1.7 1 1 0 1 1 1 0 Syntaxin 6, N-terminal MbeD_MobD PF04899.12 gi|15922525|ref|NP_378194.1| - 0.72 10.0 3.7 3.1 8.0 0.7 2.4 1 1 0 2 2 2 0 MbeD/MobD like Vps5 PF09325.10 gi|15922525|ref|NP_378194.1| - 0.74 9.3 4.4 1.5 8.3 4.0 1.6 1 1 1 2 2 2 0 Vps5 C terminal like Sec34 PF04136.15 gi|15922525|ref|NP_378194.1| - 0.88 9.4 8.3 0.74 9.7 4.8 2.0 1 1 1 2 2 2 0 Sec34-like family RIFIN PF02009.16 gi|15922525|ref|NP_378194.1| - 0.9 9.4 5.7 1.5 8.6 5.7 1.4 1 0 0 1 1 1 0 Rifin JIP_LZII PF16471.5 gi|15922525|ref|NP_378194.1| - 1.1 9.5 5.3 21 5.4 0.2 2.8 1 1 2 3 3 3 0 JNK-interacting protein leucine zipper II CENP-H PF05837.12 gi|15922525|ref|NP_378194.1| - 1.5 9.2 5.8 2.2 8.7 3.7 2.0 1 1 1 2 2 2 0 Centromere protein H (CENP-H) DUF4094 PF13334.6 gi|15922525|ref|NP_378194.1| - 1.7 9.1 9.4 47 4.5 4.3 3.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4094) CCDC144C PF14915.6 gi|15922525|ref|NP_378194.1| - 2 7.4 9.8 1.3 8.0 3.4 2.0 1 1 1 2 2 2 0 CCDC144C protein coiled-coil region Paramyx_P_V_C PF03210.13 gi|15922525|ref|NP_378194.1| - 2.7 7.8 5.5 3.5 7.4 1.3 2.2 1 1 1 2 2 2 0 Paramyxovirus P/V phosphoprotein C-terminal DASH_Duo1 PF08651.10 gi|15922525|ref|NP_378194.1| - 3.3 7.6 10.0 8.6 6.2 1.9 2.7 1 1 1 2 2 2 0 DASH complex subunit Duo1 FlxA PF14282.6 gi|15922525|ref|NP_378194.1| - 3.6 7.6 13.4 6.1 6.9 3.0 2.9 1 1 2 3 3 3 0 FlxA-like protein Lectin_N PF03954.14 gi|15922525|ref|NP_378194.1| - 3.7 7.3 17.6 0.87 9.3 12.3 2.5 2 1 0 2 2 1 0 Hepatic lectin, N-terminal domain DUF677 PF05055.12 gi|15922525|ref|NP_378194.1| - 6.1 5.6 12.3 0.17 10.8 0.8 2.7 2 1 1 3 3 2 0 Protein of unknown function (DUF677) TrbC PF04956.13 gi|15922525|ref|NP_378194.1| - 8.2 6.7 9.2 0.17 12.2 0.3 2.8 3 0 0 3 3 1 0 TrbC/VIRB2 family RTX_C PF08339.10 gi|15922525|ref|NP_378194.1| - 9.9 6.2 11.0 18 5.4 11.0 1.4 1 0 0 1 1 1 0 RTX C-terminal domain Glu_synthase PF01645.17 gi|15922526|ref|NP_378195.1| - 6.7e-98 328.2 4.5 1.1e-92 311.0 2.7 2.1 2 0 0 2 2 2 2 Conserved region in glutamate synthase Glu_syn_central PF04898.14 gi|15922526|ref|NP_378195.1| - 6.2e-19 68.6 0.0 9.3e-07 28.6 0.0 3.2 3 0 0 3 3 3 3 Glutamate synthase central domain FMN_dh PF01070.18 gi|15922526|ref|NP_378195.1| - 7.3e-07 28.5 9.2 0.00033 19.8 6.0 2.6 2 0 0 2 2 2 2 FMN-dependent dehydrogenase IMPDH PF00478.25 gi|15922526|ref|NP_378195.1| - 0.00043 19.4 7.8 0.013 14.5 6.2 2.3 2 0 0 2 2 2 2 IMP dehydrogenase / GMP reductase domain NMO PF03060.15 gi|15922526|ref|NP_378195.1| - 0.11 11.9 6.8 0.052 12.9 4.5 1.7 2 0 0 2 2 2 0 Nitronate monooxygenase DHO_dh PF01180.21 gi|15922526|ref|NP_378195.1| - 0.18 11.0 2.4 0.4 9.8 2.4 1.6 1 1 0 1 1 1 0 Dihydroorotate dehydrogenase DUF1192 PF06698.11 gi|15922526|ref|NP_378195.1| - 0.27 11.3 0.9 7.5 6.7 0.0 2.5 2 0 0 2 2 2 0 Protein of unknown function (DUF1192) GXGXG PF01493.19 gi|15922527|ref|NP_378196.1| - 2.5e-23 82.7 9.5 4.5e-23 81.8 9.5 1.4 1 0 0 1 1 1 1 GXGXG motif GATase_2 PF00310.21 gi|15922527|ref|NP_378196.1| - 5e-07 28.8 0.0 0.023 13.4 0.0 2.4 2 1 0 3 3 3 2 Glutamine amidotransferases class-II GATase_6 PF13522.6 gi|15922527|ref|NP_378196.1| - 2.5e-06 27.7 0.0 2.2e-05 24.7 0.0 2.2 1 1 0 1 1 1 1 Glutamine amidotransferase domain CbiG_N PF11760.8 gi|15922528|ref|NP_378197.1| - 0.025 14.6 0.0 0.045 13.8 0.0 1.4 1 0 0 1 1 1 0 Cobalamin synthesis G N-terminal Peripla_BP_2 PF01497.18 gi|15922529|ref|NP_378198.1| - 1.4e-19 70.6 0.0 1.7e-19 70.3 0.0 1.0 1 0 0 1 1 1 1 Periplasmic binding protein HEAT_UF PF18817.1 gi|15922529|ref|NP_378198.1| - 0.056 13.7 0.4 0.25 11.6 0.1 2.0 2 0 0 2 2 2 0 Repeat of uncharacterized protein PH0542 DUF3165 PF11364.8 gi|15922530|ref|NP_378199.1| - 0.092 13.1 0.2 0.092 13.1 0.2 2.6 3 0 0 3 3 3 0 Protein of unknown function (DUF3165) HMGL-like PF00682.19 gi|15922531|ref|NP_378200.1| - 2e-52 178.4 0.0 2.9e-52 177.9 0.0 1.2 1 0 0 1 1 1 1 HMGL-like LeuA_dimer PF08502.10 gi|15922531|ref|NP_378200.1| - 1.1e-24 86.8 0.2 2e-24 86.0 0.2 1.4 1 0 0 1 1 1 1 LeuA allosteric (dimerisation) domain Polbeta PF18765.1 gi|15922531|ref|NP_378200.1| - 0.0054 16.8 0.2 0.38 10.9 0.0 2.7 1 1 1 2 2 2 1 Polymerase beta, Nucleotidyltransferase NTP_transf_2 PF01909.23 gi|15922531|ref|NP_378200.1| - 0.088 13.1 2.0 1.8 8.9 0.4 3.2 2 1 0 2 2 2 0 Nucleotidyltransferase domain UbiA PF01040.18 gi|15922532|ref|NP_378201.1| - 8.7e-41 139.9 18.8 1.1e-40 139.6 18.8 1.1 1 0 0 1 1 1 1 UbiA prenyltransferase family GGACT PF06094.12 gi|15922533|ref|NP_378202.1| - 2.1e-32 112.3 7.2 6.1e-23 81.7 2.6 2.0 2 0 0 2 2 2 2 Gamma-glutamyl cyclotransferase, AIG2-like AIG2_2 PF13772.6 gi|15922533|ref|NP_378202.1| - 1.5e-09 38.1 3.0 6.4e-08 32.9 0.3 2.3 2 0 0 2 2 2 2 AIG2-like family SF3b10 PF07189.11 gi|15922533|ref|NP_378202.1| - 0.026 14.6 0.0 0.056 13.6 0.0 1.5 1 0 0 1 1 1 0 Splicing factor 3B subunit 10 (SF3b10) NfeD PF01957.18 gi|15922534|ref|NP_378203.1| - 2.3e-16 59.9 2.3 4.2e-16 59.1 2.3 1.5 1 1 0 1 1 1 1 NfeD-like C-terminal, partner-binding DPM2 PF07297.12 gi|15922534|ref|NP_378203.1| - 0.2 12.0 5.1 0.32 11.3 5.1 1.4 1 0 0 1 1 1 0 Dolichol phosphate-mannose biosynthesis regulatory protein (DPM2) Thermopsin PF05317.11 gi|15922535|ref|NP_378204.1| - 1.9e-24 86.6 9.3 1.9e-24 86.6 9.3 1.9 2 1 1 3 3 3 1 Thermopsin Band_7 PF01145.25 gi|15922536|ref|NP_378205.1| - 1e-38 133.2 2.3 1.4e-38 132.7 2.3 1.2 1 0 0 1 1 1 1 SPFH domain / Band 7 family Band_7_1 PF13421.6 gi|15922536|ref|NP_378205.1| - 0.00076 19.3 0.2 0.0072 16.1 0.1 2.1 2 0 0 2 2 2 1 SPFH domain-Band 7 family DUF4315 PF14193.6 gi|15922536|ref|NP_378205.1| - 0.091 12.8 2.1 0.15 12.0 2.1 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4315) RBD-FIP PF09457.10 gi|15922536|ref|NP_378205.1| - 0.12 12.3 1.1 0.24 11.3 1.1 1.5 1 0 0 1 1 1 0 FIP domain DivIVA PF05103.13 gi|15922536|ref|NP_378205.1| - 0.19 11.8 3.1 0.39 10.8 3.0 1.5 1 1 0 1 1 1 0 DivIVA protein ThiP_synth PF10120.9 gi|15922537|ref|NP_378206.1| - 5.4e-53 179.0 0.0 6e-53 178.8 0.0 1.0 1 0 0 1 1 1 1 Thiamine-phosphate synthase MerR PF00376.23 gi|15922537|ref|NP_378206.1| - 0.17 11.7 0.1 1.8 8.4 0.0 2.4 2 0 0 2 2 2 0 MerR family regulatory protein PadR PF03551.14 gi|15922538|ref|NP_378207.1| - 4.8e-17 61.7 0.0 7.4e-17 61.1 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family RTP PF02334.16 gi|15922538|ref|NP_378207.1| - 9.3e-05 23.0 0.6 0.00043 20.9 0.1 2.1 1 1 1 2 2 2 1 Replication terminator protein DUF1495 PF07381.11 gi|15922538|ref|NP_378207.1| - 9.3e-05 22.2 0.1 0.00035 20.3 0.1 2.0 1 1 0 1 1 1 1 Winged helix DNA-binding domain (DUF1495) TrmB PF01978.19 gi|15922538|ref|NP_378207.1| - 0.0011 18.8 0.1 0.005 16.7 0.0 2.1 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_45 PF14947.6 gi|15922538|ref|NP_378207.1| - 0.0014 18.5 2.0 0.0057 16.6 0.1 2.5 2 1 1 3 3 3 1 Winged helix-turn-helix DUF4364 PF14277.6 gi|15922538|ref|NP_378207.1| - 0.005 16.6 0.7 0.013 15.2 0.0 1.9 2 1 0 2 2 2 1 Domain of unknown function (DUF4364) AphA_like PF14557.6 gi|15922538|ref|NP_378207.1| - 0.0074 16.0 0.0 0.012 15.3 0.0 1.3 1 1 0 1 1 1 1 Putative AphA-like transcriptional regulator HTH_5 PF01022.20 gi|15922538|ref|NP_378207.1| - 0.017 15.0 0.2 1.2 9.1 0.1 3.0 4 0 0 4 4 4 0 Bacterial regulatory protein, arsR family B-block_TFIIIC PF04182.12 gi|15922538|ref|NP_378207.1| - 0.048 13.8 0.2 6.9 6.9 0.0 2.8 2 1 1 3 3 3 0 B-block binding subunit of TFIIIC Ribosomal_S8 PF00410.19 gi|15922538|ref|NP_378207.1| - 0.048 13.6 0.6 0.84 9.6 0.2 2.2 1 1 1 2 2 2 0 Ribosomal protein S8 Pyr_redox_2 PF07992.14 gi|15922539|ref|NP_378208.1| - 9.6e-27 94.0 0.1 1.4e-26 93.4 0.1 1.2 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|15922539|ref|NP_378208.1| - 4.2e-07 30.4 0.3 0.0061 17.1 0.1 2.5 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_9 PF13454.6 gi|15922539|ref|NP_378208.1| - 0.00012 22.2 0.0 0.028 14.4 0.0 2.6 3 0 0 3 3 3 1 FAD-NAD(P)-binding NAD_binding_8 PF13450.6 gi|15922539|ref|NP_378208.1| - 0.0076 16.5 0.0 0.027 14.7 0.0 1.9 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain Trp_halogenase PF04820.14 gi|15922539|ref|NP_378208.1| - 0.0081 15.0 0.3 0.022 13.7 0.1 1.8 2 0 0 2 2 2 1 Tryptophan halogenase TrkA_N PF02254.18 gi|15922539|ref|NP_378208.1| - 0.01 16.1 0.2 0.035 14.4 0.1 1.9 2 0 0 2 2 2 0 TrkA-N domain Thi4 PF01946.17 gi|15922539|ref|NP_378208.1| - 0.021 14.1 0.2 0.059 12.6 0.1 1.8 2 0 0 2 2 2 0 Thi4 family Lycopene_cycl PF05834.12 gi|15922539|ref|NP_378208.1| - 0.022 13.8 0.1 0.077 12.0 0.0 1.9 1 1 1 2 2 2 0 Lycopene cyclase protein Sacchrp_dh_NADP PF03435.18 gi|15922539|ref|NP_378208.1| - 0.023 14.9 0.0 0.06 13.6 0.0 1.7 1 0 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain FAD_binding_3 PF01494.19 gi|15922539|ref|NP_378208.1| - 0.032 13.5 0.0 0.27 10.5 0.0 2.0 2 0 0 2 2 2 0 FAD binding domain ApbA PF02558.16 gi|15922539|ref|NP_378208.1| - 0.053 13.2 0.0 0.086 12.5 0.0 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA DAO PF01266.24 gi|15922539|ref|NP_378208.1| - 0.09 12.3 0.2 0.3 10.6 0.1 1.9 3 0 0 3 3 3 0 FAD dependent oxidoreductase GIDA PF01134.22 gi|15922539|ref|NP_378208.1| - 0.13 11.3 0.2 12 4.8 0.1 2.3 2 0 0 2 2 2 0 Glucose inhibited division protein A NAD_binding_7 PF13241.6 gi|15922539|ref|NP_378208.1| - 0.15 12.5 0.1 0.35 11.3 0.1 1.7 1 0 0 1 1 1 0 Putative NAD(P)-binding GMC_oxred_N PF00732.19 gi|15922539|ref|NP_378208.1| - 0.17 11.3 0.0 0.27 10.6 0.0 1.3 1 0 0 1 1 1 0 GMC oxidoreductase Pyr_redox_3 PF13738.6 gi|15922539|ref|NP_378208.1| - 0.17 11.1 3.6 0.54 9.5 2.0 2.3 2 1 1 3 3 3 0 Pyridine nucleotide-disulphide oxidoreductase DUF364 PF04016.12 gi|15922540|ref|NP_378209.1| - 2.1e-30 105.3 0.0 3.2e-30 104.7 0.0 1.2 1 0 0 1 1 1 1 Putative heavy-metal chelation DUF4213 PF13938.6 gi|15922540|ref|NP_378209.1| - 6.6e-12 45.5 0.1 1e-11 44.9 0.1 1.3 1 0 0 1 1 1 1 Putative heavy-metal chelation DUF836 PF05768.14 gi|15922541|ref|NP_378210.1| - 0.0095 16.3 0.1 0.05 14.0 0.1 2.2 1 0 0 1 1 1 1 Glutaredoxin-like domain (DUF836) DUF1599 PF07659.11 gi|15922541|ref|NP_378210.1| - 0.071 13.6 0.9 0.35 11.3 0.1 2.7 3 0 0 3 3 3 0 Nucleotide modification associated domain 1 Glyco_hydro_88 PF07470.13 gi|15922541|ref|NP_378210.1| - 0.13 11.3 0.1 0.97 8.4 0.0 1.9 1 1 1 2 2 2 0 Glycosyl Hydrolase Family 88 DUF2175 PF09943.9 gi|15922542|ref|NP_378211.1| - 7.1e-36 122.4 0.8 8e-36 122.3 0.8 1.0 1 0 0 1 1 1 1 Uncharacterized protein conserved in archaea (DUF2175) Vps39_2 PF10367.9 gi|15922542|ref|NP_378211.1| - 0.01 16.3 0.5 0.041 14.3 0.0 2.0 2 1 0 2 2 2 0 Vacuolar sorting protein 39 domain 2 GatB_Yqey PF02637.18 gi|15922542|ref|NP_378211.1| - 0.019 14.8 1.1 0.023 14.6 1.1 1.1 1 0 0 1 1 1 0 GatB domain HAD_SAK_1 PF10307.9 gi|15922542|ref|NP_378211.1| - 0.053 13.3 0.2 0.061 13.1 0.2 1.1 1 0 0 1 1 1 0 HAD domain family 1 in Swiss Army Knife RNA repair proteins H-kinase_dim PF02895.14 gi|15922542|ref|NP_378211.1| - 0.072 13.5 1.1 0.11 12.9 1.1 1.2 1 0 0 1 1 1 0 Signal transducing histidine kinase, homodimeric domain Ca_bind_SSO6904 PF18249.1 gi|15922542|ref|NP_378211.1| - 0.11 12.9 1.8 5.3 7.5 0.2 2.1 1 1 1 2 2 2 0 Calcium binding protein SSO6904 Thy1 PF02511.15 gi|15922543|ref|NP_378212.1| - 5.6e-64 215.4 1.4 6.9e-64 215.1 1.4 1.1 1 0 0 1 1 1 1 Thymidylate synthase complementing protein Oxidored_q4 PF00507.19 gi|15922544|ref|NP_378213.1| - 1.5e-06 28.2 1.8 2.5e-06 27.6 1.8 1.3 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 Complex1_30kDa PF00329.19 gi|15922545|ref|NP_378214.1| - 8.8e-37 126.4 0.0 1.1e-36 126.1 0.0 1.1 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 30 Kd subunit Complex1_49kDa PF00346.19 gi|15922546|ref|NP_378215.1| - 1.7e-93 312.6 0.0 2.6e-93 312.0 0.0 1.2 1 0 0 1 1 1 1 Respiratory-chain NADH dehydrogenase, 49 Kd subunit NiFeSe_Hases PF00374.19 gi|15922546|ref|NP_378215.1| - 0.032 13.1 0.2 0.17 10.7 0.0 2.1 3 0 0 3 3 3 0 Nickel-dependent hydrogenase Nitrate_red_gam PF02665.14 gi|15922546|ref|NP_378215.1| - 0.13 11.8 0.2 0.24 10.9 0.2 1.4 1 0 0 1 1 1 0 Nitrate reductase gamma subunit NADHdh PF00146.21 gi|15922547|ref|NP_378216.1| - 2.7e-81 273.2 23.2 3.4e-81 272.8 23.2 1.1 1 0 0 1 1 1 1 NADH dehydrogenase Fer4 PF00037.27 gi|15922548|ref|NP_378217.1| - 1.7e-14 52.9 12.7 6.1e-09 35.3 3.0 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_10 PF13237.6 gi|15922548|ref|NP_378217.1| - 1.5e-10 41.0 15.2 3.6e-08 33.4 7.9 1.7 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15922548|ref|NP_378217.1| - 3e-10 40.5 6.8 5.6e-10 39.7 6.8 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15922548|ref|NP_378217.1| - 1.4e-09 38.8 4.4 0.00038 21.3 0.1 2.9 3 0 0 3 3 3 2 4Fe-4S double cluster binding domain Fer4_21 PF14697.6 gi|15922548|ref|NP_378217.1| - 2.4e-09 37.2 9.5 6.9e-09 35.7 9.5 1.7 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15922548|ref|NP_378217.1| - 8.8e-09 35.4 6.2 1.4e-08 34.7 6.2 1.4 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15922548|ref|NP_378217.1| - 3.5e-08 33.2 14.6 0.00046 20.1 2.8 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|15922548|ref|NP_378217.1| - 2e-06 27.6 10.0 0.0095 16.0 0.9 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_17 PF13534.6 gi|15922548|ref|NP_378217.1| - 1.2e-05 25.7 0.7 0.11 13.0 0.1 2.3 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15922548|ref|NP_378217.1| - 2.4e-05 24.5 8.9 0.016 15.7 1.5 2.2 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|15922548|ref|NP_378217.1| - 0.00023 21.9 16.5 0.032 15.1 4.9 2.3 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|15922548|ref|NP_378217.1| - 0.00045 20.6 7.9 0.036 14.5 0.7 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|15922548|ref|NP_378217.1| - 0.0034 18.1 5.2 0.44 11.3 0.5 2.5 2 0 0 2 2 2 2 4Fe-4S single cluster domain Fer4_13 PF13370.6 gi|15922548|ref|NP_378217.1| - 0.008 16.7 7.4 0.15 12.7 0.9 2.5 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_18 PF13746.6 gi|15922548|ref|NP_378217.1| - 0.18 12.0 10.6 0.099 12.8 1.5 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|15922548|ref|NP_378217.1| - 1.1 10.2 11.9 5.2 8.0 2.0 2.4 1 1 2 3 3 3 0 4Fe-4S dicluster domain Oxidored_q3 PF00499.20 gi|15922549|ref|NP_378218.1| - 2.4e-15 56.5 23.2 3.5e-15 56.0 23.2 1.2 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 Oxidored_q2 PF00420.24 gi|15922550|ref|NP_378219.1| - 1.3e-09 37.6 8.3 1.7e-09 37.3 8.3 1.2 1 0 0 1 1 1 1 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L TspO_MBR PF03073.15 gi|15922550|ref|NP_378219.1| - 0.059 13.4 3.8 0.073 13.1 3.8 1.1 1 0 0 1 1 1 0 TspO/MBR family BCLP PF12304.8 gi|15922550|ref|NP_378219.1| - 4.8 6.7 10.5 6 6.4 0.5 2.0 1 1 1 2 2 2 0 Beta-casein like protein ZYG-11_interact PF05884.12 gi|15922550|ref|NP_378219.1| - 4.9 6.5 10.6 4 6.8 9.7 1.3 1 1 0 1 1 1 0 Interactor of ZYG-11 Proton_antipo_M PF00361.20 gi|15922551|ref|NP_378220.1| - 2e-74 250.5 66.4 3.3e-46 157.8 27.2 5.2 5 3 0 5 5 5 3 Proton-conducting membrane transporter Proton_antipo_N PF00662.20 gi|15922551|ref|NP_378220.1| - 0.0012 18.9 5.1 0.0012 18.9 5.1 5.5 5 0 0 5 5 5 2 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus Proton_antipo_M PF00361.20 gi|15922552|ref|NP_378221.1| - 1.3e-42 146.0 35.8 1.3e-42 146.0 35.8 2.1 2 0 0 2 2 2 1 Proton-conducting membrane transporter Rota_NSP4 PF01452.16 gi|15922552|ref|NP_378221.1| - 0.078 12.6 1.0 0.16 11.6 1.0 1.5 1 0 0 1 1 1 0 Rotavirus non structural protein Inos-1-P_synth PF01658.17 gi|15922553|ref|NP_378222.1| - 1e-20 74.0 0.0 1.8e-20 73.2 0.0 1.4 1 0 0 1 1 1 1 Myo-inositol-1-phosphate synthase NAD_binding_5 PF07994.12 gi|15922553|ref|NP_378222.1| - 0.0035 16.8 0.0 0.0043 16.5 0.0 1.1 1 0 0 1 1 1 1 Myo-inositol-1-phosphate synthase ThiI PF02568.14 gi|15922554|ref|NP_378223.1| - 1.1e-51 175.2 0.2 1.6e-51 174.7 0.2 1.2 1 0 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) THUMP PF02926.17 gi|15922554|ref|NP_378223.1| - 9.9e-19 67.9 0.6 9.9e-19 67.9 0.6 1.9 2 0 0 2 2 2 1 THUMP domain QueC PF06508.13 gi|15922554|ref|NP_378223.1| - 2.8e-08 33.5 0.0 1.8e-06 27.6 0.0 2.6 1 1 0 1 1 1 1 Queuosine biosynthesis protein QueC ATP_bind_3 PF01171.20 gi|15922554|ref|NP_378223.1| - 0.017 14.9 0.0 0.037 13.8 0.0 1.5 1 1 0 1 1 1 0 PP-loop family PAP2 PF01569.21 gi|15922555|ref|NP_378224.1| - 1.7e-20 73.1 4.6 1.7e-20 73.1 4.6 2.0 2 1 0 2 2 2 1 PAP2 superfamily PAP2_3 PF14378.6 gi|15922555|ref|NP_378224.1| - 1.9e-06 27.7 13.8 4e-05 23.4 13.1 2.3 1 1 0 1 1 1 1 PAP2 superfamily PAP2_C PF14360.6 gi|15922555|ref|NP_378224.1| - 0.078 13.5 0.5 0.078 13.5 0.5 2.9 3 1 0 3 3 3 0 PAP2 superfamily C-terminal Acetyltransf_1 PF00583.25 gi|15922556|ref|NP_378225.1| - 7.4e-10 39.1 0.1 1.2e-09 38.4 0.1 1.4 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_3 PF13302.7 gi|15922556|ref|NP_378225.1| - 1.8e-09 38.4 0.0 2.2e-09 38.1 0.0 1.2 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_15 PF17013.5 gi|15922556|ref|NP_378225.1| - 0.00023 20.7 1.3 0.00035 20.1 1.1 1.4 1 1 0 1 1 1 1 Putative acetyl-transferase FR47 PF08445.10 gi|15922556|ref|NP_378225.1| - 0.0046 16.9 0.0 0.012 15.6 0.0 1.6 1 0 0 1 1 1 1 FR47-like protein Gly_acyl_tr_C PF08444.10 gi|15922556|ref|NP_378225.1| - 0.0048 17.1 0.2 0.018 15.3 0.1 1.9 2 0 0 2 2 2 1 Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region GNAT_acetyltran PF12746.7 gi|15922556|ref|NP_378225.1| - 0.016 14.7 0.6 0.027 14.0 0.1 1.6 2 0 0 2 2 2 0 GNAT acetyltransferase Acetyltransf_9 PF13527.7 gi|15922556|ref|NP_378225.1| - 0.026 14.6 0.0 0.041 14.0 0.0 1.5 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|15922556|ref|NP_378225.1| - 0.035 14.1 0.0 0.06 13.3 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_7 PF13508.7 gi|15922556|ref|NP_378225.1| - 0.057 13.8 0.1 0.098 13.1 0.1 1.5 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain Sulfotransfer_1 PF00685.27 gi|15922556|ref|NP_378225.1| - 0.089 12.3 0.1 0.15 11.5 0.1 1.3 1 0 0 1 1 1 0 Sulfotransferase domain ParE_toxin PF05016.15 gi|15922558|ref|NP_378227.1| - 2.9e-06 27.8 0.1 3.6e-06 27.5 0.1 1.1 1 0 0 1 1 1 1 ParE toxin of type II toxin-antitoxin system, parDE CRAL_TRIO PF00650.20 gi|15922558|ref|NP_378227.1| - 0.078 12.7 0.1 2.1 8.0 0.0 2.6 2 1 1 3 3 3 0 CRAL/TRIO domain Phage_integrase PF00589.22 gi|15922559|ref|NP_378228.1| - 1.9e-09 37.5 0.2 3.8e-09 36.6 0.2 1.5 1 0 0 1 1 1 1 Phage integrase family HTH_26 PF13443.6 gi|15922559|ref|NP_378228.1| - 0.0081 16.6 0.1 0.53 10.8 0.0 2.5 2 1 0 2 2 2 1 Cro/C1-type HTH DNA-binding domain AbiJ_NTD4 PF18863.1 gi|15922559|ref|NP_378228.1| - 0.026 15.0 0.2 6.2 7.3 0.0 2.2 2 0 0 2 2 2 0 AbiJ N-terminal domain 4 DUF772 PF05598.11 gi|15922560|ref|NP_378229.1| - 1e-08 35.0 0.2 6.3e-08 32.5 0.1 2.3 1 1 1 2 2 2 1 Transposase domain (DUF772) DDE_Tnp_1 PF01609.21 gi|15922560|ref|NP_378229.1| - 0.012 15.3 0.0 0.051 13.2 0.0 2.0 1 1 1 2 2 2 0 Transposase DDE domain SSV1_ORF_D-335 PF07935.11 gi|15922561|ref|NP_378230.1| - 7.5e-21 74.2 0.3 9.9e-21 73.8 0.3 1.2 1 0 0 1 1 1 1 ORF D-335-like protein HTH_20 PF12840.7 gi|15922563|ref|NP_378232.1| - 5.4e-06 26.4 0.0 3.2e-05 23.9 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|15922563|ref|NP_378232.1| - 1.7e-05 24.6 0.1 5.2e-05 23.0 0.0 1.8 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family TrmB PF01978.19 gi|15922563|ref|NP_378232.1| - 0.00014 21.6 0.5 0.0002 21.2 0.5 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_24 PF13412.6 gi|15922563|ref|NP_378232.1| - 0.00056 19.4 0.0 0.0013 18.3 0.0 1.7 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding LexA_DNA_bind PF01726.16 gi|15922563|ref|NP_378232.1| - 0.0035 17.1 0.0 0.0065 16.2 0.0 1.4 1 0 0 1 1 1 1 LexA DNA binding domain HTH_27 PF13463.6 gi|15922563|ref|NP_378232.1| - 0.011 16.3 0.1 0.018 15.5 0.1 1.3 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_11 PF08279.12 gi|15922563|ref|NP_378232.1| - 0.012 15.6 0.1 0.02 14.8 0.1 1.4 1 0 0 1 1 1 0 HTH domain HTH_12 PF08461.10 gi|15922563|ref|NP_378232.1| - 0.024 14.6 0.1 0.055 13.4 0.1 1.6 1 0 0 1 1 1 0 Ribonuclease R winged-helix domain DUF1803 PF08820.10 gi|15922563|ref|NP_378232.1| - 0.025 14.6 0.8 0.091 12.8 0.2 1.9 2 0 0 2 2 2 0 Domain of unknown function (DUF1803) DUF4423 PF14394.6 gi|15922563|ref|NP_378232.1| - 0.031 14.0 0.0 0.045 13.5 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_36 PF13730.6 gi|15922563|ref|NP_378232.1| - 0.083 12.9 0.5 2.9 7.9 0.0 2.8 2 1 0 2 2 2 0 Helix-turn-helix domain HTH_28 PF13518.6 gi|15922563|ref|NP_378232.1| - 0.18 12.0 0.0 0.4 10.8 0.0 1.6 2 0 0 2 2 2 0 Helix-turn-helix domain Zip PF02535.22 gi|15922563|ref|NP_378232.1| - 0.86 8.7 5.3 1.2 8.3 5.3 1.1 1 0 0 1 1 1 0 ZIP Zinc transporter DHDPS PF00701.22 gi|15922566|ref|NP_378235.1| - 9.8e-51 172.2 0.2 1.2e-50 171.9 0.2 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family Protein_K PF12283.8 gi|15922566|ref|NP_378235.1| - 0.086 13.1 0.1 0.2 11.9 0.1 1.6 1 0 0 1 1 1 0 Bacteriophage protein K YjcQ PF09639.10 gi|15922566|ref|NP_378235.1| - 0.11 12.7 4.6 1 9.6 0.1 2.9 3 0 0 3 3 3 0 YjcQ protein LpxI_N PF17930.1 gi|15922566|ref|NP_378235.1| - 0.12 12.2 0.0 0.62 10.0 0.0 2.1 2 0 0 2 2 2 0 LpxI N-terminal domain SLH PF00395.20 gi|15922566|ref|NP_378235.1| - 0.12 12.4 0.1 2 8.5 0.0 2.8 3 0 0 3 3 3 0 S-layer homology domain Fe_dep_repr_C PF02742.15 gi|15922567|ref|NP_378236.1| - 6.5e-22 77.4 0.0 1.2e-21 76.5 0.0 1.5 1 0 0 1 1 1 1 Iron dependent repressor, metal binding and dimerisation domain HTH_45 PF14947.6 gi|15922567|ref|NP_378236.1| - 4.5e-05 23.4 0.0 6.7e-05 22.8 0.0 1.3 1 0 0 1 1 1 1 Winged helix-turn-helix Fe_dep_repress PF01325.19 gi|15922567|ref|NP_378236.1| - 0.00013 22.1 0.4 0.00026 21.1 0.1 1.7 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain TrmB PF01978.19 gi|15922567|ref|NP_378236.1| - 0.0017 18.2 0.0 0.0047 16.8 0.0 1.7 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB DUF4423 PF14394.6 gi|15922567|ref|NP_378236.1| - 0.0057 16.4 0.0 0.0086 15.8 0.0 1.4 1 1 0 1 1 1 1 Domain of unknown function (DUF4423) RuvB_C PF05491.13 gi|15922567|ref|NP_378236.1| - 0.017 15.0 0.0 0.085 12.7 0.0 2.1 2 0 0 2 2 2 0 RuvB C-terminal winged helix domain HTH_27 PF13463.6 gi|15922567|ref|NP_378236.1| - 0.11 13.0 0.0 0.18 12.3 0.0 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain TauE PF01925.19 gi|15922568|ref|NP_378237.1| - 4.6e-52 177.0 42.4 5.3e-52 176.8 42.4 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE Trp_oprn_chp PF09534.10 gi|15922568|ref|NP_378237.1| - 0.0092 15.8 1.0 4.6 7.0 0.0 2.5 2 0 0 2 2 2 2 Tryptophan-associated transmembrane protein (Trp_oprn_chp) EMP70 PF02990.16 gi|15922568|ref|NP_378237.1| - 4.6 5.8 12.0 0.47 9.0 4.6 2.1 2 0 0 2 2 2 0 Endomembrane protein 70 UDG PF03167.19 gi|15922569|ref|NP_378238.1| - 9.3e-46 155.6 0.0 1.2e-45 155.3 0.0 1.1 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily adh_short_C2 PF13561.6 gi|15922570|ref|NP_378239.1| - 1e-49 169.2 0.0 1.5e-49 168.7 0.0 1.1 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|15922570|ref|NP_378239.1| - 8.8e-33 113.4 0.0 1.1e-32 113.1 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|15922570|ref|NP_378239.1| - 6.6e-05 22.9 0.0 0.00012 22.1 0.0 1.3 1 0 0 1 1 1 1 KR domain AcetylCoA_hydro PF02550.15 gi|15922570|ref|NP_378239.1| - 0.049 13.6 0.0 0.13 12.3 0.0 1.7 1 0 0 1 1 1 0 Acetyl-CoA hydrolase/transferase N-terminal domain Epimerase PF01370.21 gi|15922570|ref|NP_378239.1| - 0.064 12.7 0.0 0.12 11.8 0.0 1.4 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family Polysacc_synt_2 PF02719.15 gi|15922570|ref|NP_378239.1| - 0.071 12.2 0.0 0.37 9.9 0.0 1.9 2 0 0 2 2 2 0 Polysaccharide biosynthesis protein 3Beta_HSD PF01073.19 gi|15922570|ref|NP_378239.1| - 0.18 10.8 0.0 0.25 10.3 0.0 1.2 1 0 0 1 1 1 0 3-beta hydroxysteroid dehydrogenase/isomerase family YoeB_toxin PF06769.14 gi|15922570|ref|NP_378239.1| - 0.19 11.8 0.0 0.42 10.7 0.0 1.6 1 0 0 1 1 1 0 YoeB-like toxin of bacterial type II toxin-antitoxin system AAA_15 PF13175.6 gi|15922571|ref|NP_378240.1| - 4.3e-31 108.9 5.9 4.3e-17 62.9 0.1 2.4 1 1 1 2 2 2 2 AAA ATPase domain AAA_21 PF13304.6 gi|15922571|ref|NP_378240.1| - 2.1e-20 73.8 3.7 5.1e-19 69.2 3.7 2.5 1 1 0 1 1 1 1 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|15922571|ref|NP_378240.1| - 2.6e-08 33.6 0.8 4.2e-07 29.6 0.8 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_23 PF13476.6 gi|15922571|ref|NP_378240.1| - 9.4e-07 29.5 0.1 2e-06 28.4 0.1 1.6 1 0 0 1 1 1 1 AAA domain AAA_13 PF13166.6 gi|15922571|ref|NP_378240.1| - 0.002 16.8 2.1 0.056 12.1 0.2 2.1 2 0 0 2 2 2 2 AAA domain ABC_tran PF00005.27 gi|15922571|ref|NP_378240.1| - 0.004 17.7 0.7 0.082 13.4 0.7 2.5 1 1 0 1 1 1 1 ABC transporter DUF2813 PF11398.8 gi|15922571|ref|NP_378240.1| - 0.032 13.5 1.0 1.7 7.8 0.0 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2813) DUF131 PF01998.17 gi|15922572|ref|NP_378241.1| - 1.8e-22 78.7 3.3 1.8e-22 78.7 3.3 2.2 1 1 1 2 2 2 1 Protein of unknown function DUF131 Saf_2TM PF18303.1 gi|15922572|ref|NP_378241.1| - 0.0072 15.9 4.0 0.53 9.9 0.0 2.0 2 0 0 2 2 2 1 SAVED-fused 2TM effector domain SUR7 PF06687.12 gi|15922572|ref|NP_378241.1| - 0.0084 15.8 0.6 0.011 15.4 0.6 1.2 1 0 0 1 1 1 1 SUR7/PalI family HRG PF16954.5 gi|15922572|ref|NP_378241.1| - 0.02 15.3 3.4 1.8 9.1 0.0 2.2 2 0 0 2 2 2 0 Haem-transporter, endosomal/lysosomal, haem-responsive gene HemY_N PF07219.13 gi|15922572|ref|NP_378241.1| - 0.039 14.1 2.5 0.93 9.7 0.0 2.0 2 0 0 2 2 2 0 HemY protein N-terminus EphA2_TM PF14575.6 gi|15922572|ref|NP_378241.1| - 0.092 13.6 3.7 1.3 10.0 0.0 2.1 2 0 0 2 2 2 0 Ephrin type-A receptor 2 transmembrane domain DUF2371 PF10177.9 gi|15922572|ref|NP_378241.1| - 0.11 12.7 1.7 0.16 12.2 1.7 1.3 1 1 0 1 1 1 0 Uncharacterised conserved protein (DUF2371) GRP PF07172.11 gi|15922572|ref|NP_378241.1| - 0.12 13.0 1.9 1.2 9.8 0.0 2.0 2 0 0 2 2 2 0 Glycine rich protein family DUF5305 PF17231.2 gi|15922572|ref|NP_378241.1| - 0.13 11.6 0.0 0.13 11.6 0.0 2.0 1 1 1 2 2 2 0 Family of unknown function (DUF5305) Tetraspanin PF00335.20 gi|15922572|ref|NP_378241.1| - 0.15 11.8 4.6 0.46 10.2 4.6 1.7 1 1 0 1 1 1 0 Tetraspanin family DUF2207 PF09972.9 gi|15922572|ref|NP_378241.1| - 0.17 10.6 4.4 0.27 9.9 4.4 1.4 1 1 0 1 1 1 0 Predicted membrane protein (DUF2207) Phage_Gp23 PF10669.9 gi|15922572|ref|NP_378241.1| - 0.21 11.9 6.9 1.6 9.0 0.0 2.2 2 0 0 2 2 2 0 Protein gp23 (Bacteriophage A118) Vpu PF00558.19 gi|15922572|ref|NP_378241.1| - 0.26 11.1 5.1 15 5.4 0.0 2.2 2 0 0 2 2 2 0 Vpu protein OAD_gamma PF04277.13 gi|15922572|ref|NP_378241.1| - 0.38 11.4 8.0 2 9.1 0.0 2.3 2 0 0 2 2 2 0 Oxaloacetate decarboxylase, gamma chain CRPA PF05745.11 gi|15922572|ref|NP_378241.1| - 0.89 9.6 8.9 1.5 8.8 0.2 2.1 2 0 0 2 2 2 0 Chlamydia 15 kDa cysteine-rich outer membrane protein (CRPA) Sigma_reg_N PF13800.6 gi|15922572|ref|NP_378241.1| - 1.5 9.2 7.4 32 4.9 0.0 2.1 2 0 0 2 2 2 0 Sigma factor regulator N-terminal PulG PF11773.8 gi|15922572|ref|NP_378241.1| - 2 8.3 5.0 8.6 6.3 0.0 2.1 2 0 0 2 2 2 0 Type II secretory pathway pseudopilin SdpI PF13630.6 gi|15922572|ref|NP_378241.1| - 2.7 8.2 8.7 0.82 9.8 0.6 2.2 2 0 0 2 2 2 0 SdpI/YhfL protein family Gram_pos_anchor PF00746.21 gi|15922572|ref|NP_378241.1| - 2.8 8.0 5.5 3.4 7.7 0.7 2.5 2 1 0 2 2 2 0 LPXTG cell wall anchor motif DUF4064 PF13273.6 gi|15922572|ref|NP_378241.1| - 3.2 8.1 15.3 49 4.3 8.2 2.1 1 1 0 1 1 1 0 Protein of unknown function (DUF4064) Orf78 PF06024.12 gi|15922572|ref|NP_378241.1| - 5.2 7.4 7.3 0.35 11.2 1.4 1.9 1 1 1 2 2 2 0 Orf78 (ac78) DUF2157 PF09925.9 gi|15922572|ref|NP_378241.1| - 9.9 5.9 9.6 6 6.6 2.8 2.6 1 1 1 2 2 2 0 Predicted membrane protein (DUF2157) ELFV_dehydrog PF00208.21 gi|15922573|ref|NP_378242.1| - 1.1e-71 241.5 3.4 1.4e-71 241.0 3.4 1.2 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ELFV_dehydrog_N PF02812.18 gi|15922573|ref|NP_378242.1| - 3.8e-54 182.0 0.0 9.9e-54 180.7 0.0 1.7 2 0 0 2 2 2 1 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 2-Hacid_dh_C PF02826.19 gi|15922573|ref|NP_378242.1| - 5.8e-05 22.5 0.3 9.8e-05 21.8 0.3 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AdoHcyase_NAD PF00670.21 gi|15922573|ref|NP_378242.1| - 0.064 13.3 0.5 0.14 12.2 0.4 1.6 1 1 0 1 1 1 0 S-adenosyl-L-homocysteine hydrolase, NAD binding domain NAD_binding_7 PF13241.6 gi|15922573|ref|NP_378242.1| - 0.12 12.9 0.0 0.24 11.8 0.0 1.5 1 0 0 1 1 1 0 Putative NAD(P)-binding AlaDh_PNT_C PF01262.21 gi|15922573|ref|NP_378242.1| - 0.16 11.2 2.2 0.37 10.1 1.8 1.9 1 1 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain NUDIX PF00293.28 gi|15922575|ref|NP_378244.1| - 5.6e-22 78.2 0.0 7.7e-22 77.7 0.0 1.2 1 0 0 1 1 1 1 NUDIX domain NUDIX_2 PF13869.6 gi|15922575|ref|NP_378244.1| - 0.11 12.0 0.0 0.15 11.7 0.0 1.1 1 0 0 1 1 1 0 Nucleotide hydrolase tRNA-synt_1e PF01406.19 gi|15922576|ref|NP_378245.1| - 1e-125 419.1 2.3 1.3e-125 418.7 0.4 1.9 2 0 0 2 2 2 1 tRNA synthetases class I (C) catalytic domain tRNA-synt_1g PF09334.11 gi|15922576|ref|NP_378245.1| - 2.7e-18 65.9 5.0 1.6e-10 40.3 0.8 2.4 3 0 0 3 3 3 2 tRNA synthetases class I (M) DALR_2 PF09190.11 gi|15922576|ref|NP_378245.1| - 7.6e-06 26.3 0.2 3.4e-05 24.2 0.1 2.2 3 0 0 3 3 3 1 DALR domain tRNA-synt_1 PF00133.22 gi|15922576|ref|NP_378245.1| - 1.4e-05 23.6 0.0 0.0043 15.4 0.0 2.3 2 0 0 2 2 2 2 tRNA synthetases class I (I, L, M and V) tRNA-synt_1f PF01921.18 gi|15922576|ref|NP_378245.1| - 2.2e-05 23.6 0.2 0.00022 20.3 0.0 2.1 2 0 0 2 2 2 1 tRNA synthetases class I (K) tRNA-synt_1d PF00750.19 gi|15922576|ref|NP_378245.1| - 0.00037 19.5 0.4 0.0019 17.2 0.0 2.1 2 1 0 2 2 2 1 tRNA synthetases class I (R) tRNA-synt_1c PF00749.21 gi|15922576|ref|NP_378245.1| - 0.0022 17.0 7.3 0.047 12.6 1.3 3.9 4 1 0 4 4 4 2 tRNA synthetases class I (E and Q), catalytic domain DUF3928 PF13065.6 gi|15922576|ref|NP_378245.1| - 0.067 13.9 0.3 3.1 8.6 0.1 2.8 2 0 0 2 2 2 0 Protein of unknown function (DUF3928) SH3BP5 PF05276.14 gi|15922576|ref|NP_378245.1| - 0.1 12.4 0.1 0.51 10.1 0.0 2.0 2 0 0 2 2 2 0 SH3 domain-binding protein 5 (SH3BP5) Fib_alpha PF08702.10 gi|15922576|ref|NP_378245.1| - 0.19 11.9 1.8 16 5.7 0.2 2.5 2 0 0 2 2 2 0 Fibrinogen alpha/beta chain family bact-PGI_C PF10432.9 gi|15922577|ref|NP_378246.1| - 3.8e-27 95.2 0.0 7.9e-26 90.9 0.0 2.2 1 1 0 1 1 1 1 Bacterial phospho-glucose isomerase C-terminal SIS domain SIS PF01380.22 gi|15922577|ref|NP_378246.1| - 0.0012 18.7 0.2 0.0038 17.1 0.2 1.9 1 1 0 1 1 1 1 SIS domain Pyr_redox_2 PF07992.14 gi|15922579|ref|NP_378248.1| - 6.3e-48 163.5 0.6 8.2e-48 163.1 0.6 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|15922579|ref|NP_378248.1| - 1.6e-18 67.0 4.9 2.9e-15 56.6 1.4 3.5 3 0 0 3 3 3 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_dim PF02852.22 gi|15922579|ref|NP_378248.1| - 2.9e-17 62.9 0.6 8.4e-17 61.4 0.0 2.0 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain Pyr_redox_3 PF13738.6 gi|15922579|ref|NP_378248.1| - 1.6e-14 53.8 1.9 7.6e-13 48.4 1.0 2.2 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase NAD_binding_8 PF13450.6 gi|15922579|ref|NP_378248.1| - 2e-05 24.7 0.7 0.029 14.6 0.0 2.5 2 0 0 2 2 2 2 NAD(P)-binding Rossmann-like domain GIDA PF01134.22 gi|15922579|ref|NP_378248.1| - 0.00024 20.3 2.2 0.17 11.0 0.1 3.1 3 0 0 3 3 3 2 Glucose inhibited division protein A HI0933_like PF03486.14 gi|15922579|ref|NP_378248.1| - 0.00051 18.9 6.7 0.33 9.6 0.1 3.9 3 1 1 4 4 4 2 HI0933-like protein DAO PF01266.24 gi|15922579|ref|NP_378248.1| - 0.0026 17.4 3.1 1.5 8.3 0.4 3.9 5 0 0 5 5 5 1 FAD dependent oxidoreductase AlaDh_PNT_C PF01262.21 gi|15922579|ref|NP_378248.1| - 0.0047 16.2 0.2 2 7.6 0.1 2.3 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain Lycopene_cycl PF05834.12 gi|15922579|ref|NP_378248.1| - 0.0073 15.4 0.3 2.9 6.8 0.0 2.4 2 0 0 2 2 2 2 Lycopene cyclase protein 3HCDH_N PF02737.18 gi|15922579|ref|NP_378248.1| - 0.011 15.6 0.3 0.017 15.0 0.3 1.3 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ApbA PF02558.16 gi|15922579|ref|NP_378248.1| - 0.02 14.5 0.8 0.078 12.6 0.3 2.0 2 0 0 2 2 2 0 Ketopantoate reductase PanE/ApbA FAD_binding_2 PF00890.24 gi|15922579|ref|NP_378248.1| - 0.023 13.8 1.5 0.95 8.5 0.1 2.5 2 0 0 2 2 2 0 FAD binding domain TrkA_N PF02254.18 gi|15922579|ref|NP_378248.1| - 0.025 14.9 0.3 0.12 12.7 0.3 2.1 2 0 0 2 2 2 0 TrkA-N domain NAD_binding_2 PF03446.15 gi|15922579|ref|NP_378248.1| - 0.099 12.8 0.2 0.25 11.5 0.1 1.8 2 0 0 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_binding_7 PF13241.6 gi|15922579|ref|NP_378248.1| - 0.15 12.5 0.4 1.2 9.6 0.1 2.5 3 0 0 3 3 2 0 Putative NAD(P)-binding Trp_halogenase PF04820.14 gi|15922579|ref|NP_378248.1| - 0.3 9.9 2.0 5.9 5.6 0.0 2.1 2 0 0 2 2 2 0 Tryptophan halogenase NAD_binding_9 PF13454.6 gi|15922579|ref|NP_378248.1| - 0.41 10.6 4.8 12 5.8 0.0 3.5 4 0 0 4 4 4 0 FAD-NAD(P)-binding FAD_binding_3 PF01494.19 gi|15922579|ref|NP_378248.1| - 0.97 8.6 3.5 0.45 9.7 0.2 1.9 2 0 0 2 2 2 0 FAD binding domain NurA PF09376.10 gi|15922580|ref|NP_378249.1| - 3.4e-29 102.3 0.8 4.3e-29 101.9 0.8 1.1 1 0 0 1 1 1 1 NurA domain DUF87 PF01935.17 gi|15922581|ref|NP_378250.1| - 3.9e-17 63.1 8.6 3.1e-16 60.2 5.1 3.3 3 1 0 3 3 3 1 Helicase HerA, central domain DUF853 PF05872.12 gi|15922581|ref|NP_378250.1| - 6e-09 35.0 0.0 0.0019 16.9 0.0 2.1 2 0 0 2 2 2 2 Bacterial protein of unknown function (DUF853) TrwB_AAD_bind PF10412.9 gi|15922581|ref|NP_378250.1| - 1.1e-08 34.5 0.0 8.5e-08 31.5 0.0 2.3 3 0 0 3 3 3 1 Type IV secretion-system coupling protein DNA-binding domain AAA PF00004.29 gi|15922581|ref|NP_378250.1| - 1.1e-05 25.9 0.1 0.0075 16.7 0.0 2.5 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_10 PF12846.7 gi|15922581|ref|NP_378250.1| - 5.5e-05 22.3 2.1 0.19 10.6 0.0 2.9 2 1 0 2 2 2 2 AAA-like domain ResIII PF04851.15 gi|15922581|ref|NP_378250.1| - 0.00032 20.7 0.0 0.55 10.2 0.0 2.4 2 0 0 2 2 2 2 Type III restriction enzyme, res subunit FtsK_SpoIIIE PF01580.18 gi|15922581|ref|NP_378250.1| - 0.00047 19.6 0.0 0.00099 18.5 0.0 1.5 1 0 0 1 1 1 1 FtsK/SpoIIIE family AAA_22 PF13401.6 gi|15922581|ref|NP_378250.1| - 0.00058 20.1 0.0 1.3 9.2 0.0 2.7 2 0 0 2 2 2 2 AAA domain Pox_A32 PF04665.12 gi|15922581|ref|NP_378250.1| - 0.0017 17.9 0.2 0.0048 16.4 0.2 1.7 1 0 0 1 1 1 1 Poxvirus A32 protein AAA_32 PF13654.6 gi|15922581|ref|NP_378250.1| - 0.0022 16.9 0.0 0.0041 16.0 0.0 1.4 1 0 0 1 1 1 1 AAA domain DEAD PF00270.29 gi|15922581|ref|NP_378250.1| - 0.031 14.0 0.0 4 7.2 0.0 2.3 2 0 0 2 2 2 0 DEAD/DEAH box helicase AAA_23 PF13476.6 gi|15922581|ref|NP_378250.1| - 0.055 14.0 0.8 0.12 12.9 0.8 1.6 1 1 0 1 1 1 0 AAA domain Zot PF05707.12 gi|15922581|ref|NP_378250.1| - 0.087 12.5 0.1 0.24 11.0 0.0 1.7 2 0 0 2 2 2 0 Zonular occludens toxin (Zot) AAA_7 PF12775.7 gi|15922581|ref|NP_378250.1| - 0.097 12.2 0.0 0.2 11.2 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region TsaE PF02367.17 gi|15922581|ref|NP_378250.1| - 0.15 12.0 0.0 0.31 11.1 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABC_tran PF00005.27 gi|15922581|ref|NP_378250.1| - 0.16 12.4 0.0 0.44 11.1 0.0 1.7 1 0 0 1 1 1 0 ABC transporter 4HBT PF03061.22 gi|15922583|ref|NP_378252.1| - 1.2e-20 73.7 0.0 1.9e-09 37.7 0.0 2.5 2 0 0 2 2 2 2 Thioesterase superfamily 4HBT_2 PF13279.6 gi|15922583|ref|NP_378252.1| - 0.00022 21.7 0.1 0.16 12.5 0.1 2.3 1 1 0 1 1 1 1 Thioesterase-like superfamily PDDEXK_4 PF14281.6 gi|15922583|ref|NP_378252.1| - 0.059 13.5 0.5 0.11 12.7 0.5 1.3 1 0 0 1 1 1 0 PD-(D/E)XK nuclease superfamily NYD-SP28_assoc PF14775.6 gi|15922583|ref|NP_378252.1| - 0.085 13.0 0.7 0.19 11.9 0.7 1.5 1 0 0 1 1 1 0 Sperm tail C-terminal domain PrmC_N PF17827.1 gi|15922583|ref|NP_378252.1| - 0.11 13.1 0.4 16 6.1 0.0 2.3 2 0 0 2 2 2 0 PrmC N-terminal domain ADH_N PF08240.12 gi|15922584|ref|NP_378253.1| - 1.7e-27 95.5 0.5 3.6e-27 94.4 0.5 1.6 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|15922584|ref|NP_378253.1| - 1.3e-23 83.3 0.6 2.8e-23 82.3 0.6 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|15922584|ref|NP_378253.1| - 7.3e-09 36.8 0.2 2.7e-08 35.0 0.0 1.9 2 0 0 2 2 2 1 Zinc-binding dehydrogenase ELFV_dehydrog PF00208.21 gi|15922584|ref|NP_378253.1| - 0.0017 18.1 0.3 0.0033 17.2 0.3 1.5 1 0 0 1 1 1 1 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DapB_N PF01113.20 gi|15922584|ref|NP_378253.1| - 0.022 14.9 1.9 1.6 8.9 1.9 2.5 1 1 0 1 1 1 0 Dihydrodipicolinate reductase, N-terminus PALP PF00291.25 gi|15922584|ref|NP_378253.1| - 0.046 13.1 0.2 0.16 11.3 0.1 1.9 2 0 0 2 2 2 0 Pyridoxal-phosphate dependent enzyme 2-Hacid_dh_C PF02826.19 gi|15922584|ref|NP_378253.1| - 0.073 12.4 0.1 0.15 11.4 0.1 1.5 1 0 0 1 1 1 0 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CoA_binding PF02629.19 gi|15922584|ref|NP_378253.1| - 0.2 12.3 1.8 0.72 10.6 0.3 2.6 2 0 0 2 2 2 0 CoA binding domain DUF4446 PF14584.6 gi|15922585|ref|NP_378254.1| - 0.0012 18.8 0.3 0.0022 18.0 0.3 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF4446) TACC_C PF05010.14 gi|15922585|ref|NP_378254.1| - 0.0091 15.8 0.7 0.013 15.3 0.7 1.1 1 0 0 1 1 1 1 Transforming acidic coiled-coil-containing protein (TACC), C-terminal CENP-H PF05837.12 gi|15922585|ref|NP_378254.1| - 0.017 15.5 1.3 0.029 14.8 1.3 1.3 1 0 0 1 1 1 0 Centromere protein H (CENP-H) BRE1 PF08647.11 gi|15922585|ref|NP_378254.1| - 0.12 12.4 1.2 0.19 11.8 1.2 1.2 1 0 0 1 1 1 0 BRE1 E3 ubiquitin ligase DUF4407 PF14362.6 gi|15922585|ref|NP_378254.1| - 0.12 11.7 0.0 0.21 10.9 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4407) MFS_1 PF07690.16 gi|15922586|ref|NP_378255.1| - 1.2e-15 57.3 21.9 1.2e-15 57.3 21.9 1.8 1 1 0 2 2 2 1 Major Facilitator Superfamily CitMHS PF03600.16 gi|15922587|ref|NP_378256.1| - 7.9e-37 127.1 26.0 3.3e-35 121.7 24.9 2.2 1 1 1 2 2 2 2 Citrate transporter DUF3488 PF11992.8 gi|15922587|ref|NP_378256.1| - 1 8.2 18.0 0.021 13.8 2.0 2.3 2 0 0 2 2 2 0 Domain of unknown function (DUF3488) Acyl-CoA_dh_1 PF00441.24 gi|15922588|ref|NP_378257.1| - 2.9e-43 147.7 6.1 6.1e-43 146.6 6.1 1.4 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_M PF02770.19 gi|15922588|ref|NP_378257.1| - 2e-23 82.4 0.0 4.8e-23 81.2 0.0 1.7 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, middle domain Acyl-CoA_dh_2 PF08028.11 gi|15922588|ref|NP_378257.1| - 1.6e-21 77.0 2.2 4e-21 75.7 2.2 1.7 1 0 0 1 1 1 1 Acyl-CoA dehydrogenase, C-terminal domain Acyl-CoA_dh_N PF02771.16 gi|15922588|ref|NP_378257.1| - 1.7e-16 60.9 0.6 3.8e-16 59.8 0.3 1.8 2 0 0 2 2 2 1 Acyl-CoA dehydrogenase, N-terminal domain Arc_PepC_II PF06847.11 gi|15922589|ref|NP_378258.1| - 5.4e-25 87.7 0.2 5.4e-25 87.7 0.2 2.0 2 0 0 2 2 2 1 Archaeal Peptidase A24 C-terminus Type II Peptidase_A24 PF01478.18 gi|15922589|ref|NP_378258.1| - 2e-07 31.3 8.8 4.8e-07 30.1 8.8 1.6 1 1 0 1 1 1 1 Type IV leader peptidase family Presenilin PF01080.17 gi|15922589|ref|NP_378258.1| - 7.1 5.3 10.7 11 4.7 10.7 1.2 1 0 0 1 1 1 0 Presenilin DDE_Tnp_IS240 PF13610.6 gi|15922590|ref|NP_378259.1| - 1.5e-06 28.5 0.5 2.2e-06 28.0 0.5 1.1 1 0 0 1 1 1 1 DDE domain DDE_Tnp_IS66 PF03050.14 gi|15922590|ref|NP_378259.1| - 0.0058 16.1 0.1 0.0087 15.6 0.1 1.2 1 0 0 1 1 1 1 Transposase IS66 family DUF4580 PF15162.6 gi|15922590|ref|NP_378259.1| - 0.025 14.1 0.0 0.036 13.6 0.0 1.3 1 0 0 1 1 1 0 Domain of unknown function (DUF4580) TFIIS_C PF01096.18 gi|15922591|ref|NP_378260.1| - 2.8e-23 81.5 13.0 1.6e-21 75.8 2.5 3.1 3 0 0 3 3 3 2 Transcription factor S-II (TFIIS) RNA_POL_M_15KD PF02150.16 gi|15922591|ref|NP_378260.1| - 1.3e-11 44.2 2.8 1.3e-11 44.2 2.8 3.0 3 0 0 3 3 3 1 RNA polymerases M/15 Kd subunit TF_Zn_Ribbon PF08271.12 gi|15922591|ref|NP_378260.1| - 1.3e-07 31.0 5.5 0.0014 18.1 0.9 2.7 2 1 0 2 2 2 2 TFIIB zinc-binding Zn_Tnp_IS1595 PF12760.7 gi|15922591|ref|NP_378260.1| - 3.5e-07 30.1 11.6 8.8e-05 22.4 1.0 3.0 2 1 1 3 3 3 3 Transposase zinc-ribbon domain OrfB_Zn_ribbon PF07282.11 gi|15922591|ref|NP_378260.1| - 1.1e-06 28.5 5.8 0.00087 19.2 0.4 2.5 2 1 0 2 2 2 2 Putative transposase DNA-binding domain zf-ribbon_3 PF13248.6 gi|15922591|ref|NP_378260.1| - 1.7e-05 24.1 17.5 0.056 12.9 0.2 4.3 4 0 0 4 4 4 3 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|15922591|ref|NP_378260.1| - 4.2e-05 23.1 18.4 0.11 12.3 0.2 4.4 4 0 0 4 4 4 2 zinc-ribbon domain Zn-ribbon_8 PF09723.10 gi|15922591|ref|NP_378260.1| - 4.3e-05 23.5 12.2 2 8.6 0.1 4.3 4 1 0 4 4 4 1 Zinc ribbon domain DUF2387 PF09526.10 gi|15922591|ref|NP_378260.1| - 6.7e-05 23.0 5.0 0.015 15.4 0.3 2.2 2 0 0 2 2 2 2 Probable metal-binding protein (DUF2387) DZR PF12773.7 gi|15922591|ref|NP_378260.1| - 7.1e-05 22.7 10.4 0.0012 18.8 1.5 2.8 2 1 0 2 2 2 1 Double zinc ribbon PhnA_Zn_Ribbon PF08274.12 gi|15922591|ref|NP_378260.1| - 0.00078 19.3 5.0 0.033 14.2 0.7 3.2 2 2 0 2 2 2 1 PhnA Zinc-Ribbon zinc_ribbon_4 PF13717.6 gi|15922591|ref|NP_378260.1| - 0.0012 18.8 13.1 0.58 10.1 0.8 4.2 4 0 0 4 4 4 1 zinc-ribbon domain zf-NADH-PPase PF09297.11 gi|15922591|ref|NP_378260.1| - 0.0014 18.2 1.3 0.0014 18.2 1.3 3.4 3 1 0 3 3 3 1 NADH pyrophosphatase zinc ribbon domain IBR PF01485.21 gi|15922591|ref|NP_378260.1| - 0.0014 18.8 11.9 0.0027 17.9 2.8 3.0 2 1 0 2 2 2 1 IBR domain, a half RING-finger domain C1_1 PF00130.22 gi|15922591|ref|NP_378260.1| - 0.0041 17.0 5.4 0.039 13.8 1.2 2.9 3 0 0 3 3 3 1 Phorbol esters/diacylglycerol binding domain (C1 domain) Lar_restr_allev PF14354.6 gi|15922591|ref|NP_378260.1| - 0.0044 17.4 11.3 0.032 14.6 2.8 2.6 2 2 0 2 2 2 1 Restriction alleviation protein Lar zf-H2C2_2 PF13465.6 gi|15922591|ref|NP_378260.1| - 0.009 16.4 17.5 0.31 11.5 1.6 4.2 4 0 0 4 4 4 1 Zinc-finger double domain zf-TFIIB PF13453.6 gi|15922591|ref|NP_378260.1| - 0.0094 15.3 13.1 0.0096 15.2 1.9 2.8 2 1 0 2 2 2 1 Transcription factor zinc-finger YhfH PF14149.6 gi|15922591|ref|NP_378260.1| - 0.0094 15.9 12.5 4.2 7.4 0.1 4.2 4 0 0 4 4 4 0 YhfH-like protein eIF-5_eIF-2B PF01873.17 gi|15922591|ref|NP_378260.1| - 0.013 15.4 5.9 0.16 11.8 0.2 2.4 3 0 0 3 3 2 0 Domain found in IF2B/IF5 Zn_ribbon_recom PF13408.6 gi|15922591|ref|NP_378260.1| - 0.015 15.8 1.4 0.015 15.8 1.4 2.6 2 1 0 2 2 2 0 Recombinase zinc beta ribbon domain DUF35_N PF12172.8 gi|15922591|ref|NP_378260.1| - 0.015 15.2 10.2 10 6.1 0.1 4.1 4 0 0 4 4 4 0 Rubredoxin-like zinc ribbon domain (DUF35_N) zinc_ribbon_10 PF10058.9 gi|15922591|ref|NP_378260.1| - 0.016 15.0 11.0 0.13 12.1 2.5 3.3 2 2 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein Nudix_N_2 PF14803.6 gi|15922591|ref|NP_378260.1| - 0.016 15.1 14.7 0.14 12.1 3.6 3.8 2 2 0 2 2 2 0 Nudix N-terminal zf-tcix PF14952.6 gi|15922591|ref|NP_378260.1| - 0.03 14.0 14.9 2.6 7.7 0.2 4.2 4 0 0 4 4 4 0 Putative treble-clef, zinc-finger, Zn-binding HypA PF01155.19 gi|15922591|ref|NP_378260.1| - 0.031 14.3 9.0 0.072 13.1 1.3 2.9 1 1 1 2 2 2 0 Hydrogenase/urease nickel incorporation, metallochaperone, hypA ADD_ATRX PF17981.1 gi|15922591|ref|NP_378260.1| - 0.032 14.1 1.2 11 6.0 0.0 3.2 3 0 0 3 3 3 0 Cysteine Rich ADD domain zf-ISL3 PF14690.6 gi|15922591|ref|NP_378260.1| - 0.038 14.7 13.1 1.2 9.9 0.3 4.2 3 1 1 4 4 4 0 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 zf_UBZ PF18439.1 gi|15922591|ref|NP_378260.1| - 0.046 13.3 13.0 7.1 6.3 0.3 4.1 4 0 0 4 4 4 0 Ubiquitin-Binding Zinc Finger zf-ACC PF17848.1 gi|15922591|ref|NP_378260.1| - 0.052 13.6 15.2 8.4 6.6 0.1 4.2 4 0 0 4 4 4 0 Acetyl-coA carboxylase zinc finger domain Auto_anti-p27 PF06677.12 gi|15922591|ref|NP_378260.1| - 0.06 13.5 4.2 0.06 13.5 4.2 2.8 3 0 0 3 3 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) zf-C4_Topoisom PF01396.19 gi|15922591|ref|NP_378260.1| - 0.066 13.0 19.1 0.19 11.5 0.4 4.0 3 1 1 4 4 4 0 Topoisomerase DNA binding C4 zinc finger DNA_ligase_ZBD PF03119.16 gi|15922591|ref|NP_378260.1| - 0.071 13.1 10.7 0.57 10.3 1.2 3.4 2 1 1 3 3 3 0 NAD-dependent DNA ligase C4 zinc finger domain zf-HIT PF04438.16 gi|15922591|ref|NP_378260.1| - 0.088 12.7 16.6 0.73 9.8 1.1 4.1 4 0 0 4 4 4 0 HIT zinc finger zf-C2HC5 PF06221.13 gi|15922591|ref|NP_378260.1| - 0.1 12.6 5.6 1.4 9.0 0.8 3.0 3 0 0 3 3 3 0 Putative zinc finger motif, C2HC5-type Terminase_GpA PF05876.12 gi|15922591|ref|NP_378260.1| - 0.15 10.6 5.0 0.49 8.9 0.6 2.1 2 0 0 2 2 2 0 Phage terminase large subunit (GpA) Cys_rich_CPCC PF14206.6 gi|15922591|ref|NP_378260.1| - 0.16 11.8 0.4 0.16 11.8 0.4 2.6 2 2 0 2 2 2 0 Cysteine-rich CPCC DpnI PF06044.12 gi|15922591|ref|NP_378260.1| - 0.16 11.6 3.4 1.3 8.7 0.5 2.1 2 0 0 2 2 2 0 Dam-replacing family Cytochrom_c3_2 PF14537.6 gi|15922591|ref|NP_378260.1| - 0.16 12.4 2.8 5.5 7.5 1.9 2.3 1 1 1 2 2 2 0 Cytochrome c3 zinc-ribbons_6 PF07191.12 gi|15922591|ref|NP_378260.1| - 0.17 11.9 8.8 31 4.6 8.8 2.9 1 1 0 1 1 1 0 zinc-ribbons Ribosomal_S27e PF01667.17 gi|15922591|ref|NP_378260.1| - 0.18 11.6 10.1 5 6.9 1.3 3.5 2 2 0 2 2 2 0 Ribosomal protein S27 zf-GRF PF06839.12 gi|15922591|ref|NP_378260.1| - 0.2 11.8 10.5 3.4 7.9 0.5 3.0 2 1 0 2 2 2 0 GRF zinc finger zf-IS66 PF13005.7 gi|15922591|ref|NP_378260.1| - 0.21 12.0 10.1 28 5.2 0.1 4.4 4 0 0 4 4 4 0 zinc-finger binding domain of transposase IS66 A2L_zn_ribbon PF08792.10 gi|15922591|ref|NP_378260.1| - 0.24 11.1 14.8 5 7.0 0.2 4.1 4 0 0 4 4 4 0 A2L zinc ribbon domain FdhE PF04216.12 gi|15922591|ref|NP_378260.1| - 0.25 11.2 0.1 0.25 11.2 0.1 2.3 2 1 0 2 2 2 0 Protein involved in formate dehydrogenase formation DUF3797 PF12677.7 gi|15922591|ref|NP_378260.1| - 0.28 11.1 14.5 1.1 9.2 0.2 4.1 3 1 1 4 4 4 0 Domain of unknown function (DUF3797) tRNA-synt_1f PF01921.18 gi|15922591|ref|NP_378260.1| - 0.29 10.0 2.4 0.24 10.3 0.5 1.7 1 1 1 2 2 2 0 tRNA synthetases class I (K) Desulfoferrod_N PF06397.12 gi|15922591|ref|NP_378260.1| - 0.29 10.8 11.0 1.4 8.6 0.1 3.7 4 0 0 4 4 4 0 Desulfoferrodoxin, N-terminal domain NOA36 PF06524.12 gi|15922591|ref|NP_378260.1| - 0.36 10.1 5.6 0.11 11.7 2.4 1.9 1 1 0 1 1 1 0 NOA36 protein Zn_Tnp_IS91 PF14319.6 gi|15922591|ref|NP_378260.1| - 0.38 10.8 11.3 2.4 8.2 0.2 3.9 2 2 2 4 4 4 0 Transposase zinc-binding domain zf-RING_7 PF02591.15 gi|15922591|ref|NP_378260.1| - 0.43 10.8 7.9 18 5.6 0.0 3.7 4 0 0 4 4 3 0 C4-type zinc ribbon domain UPF0547 PF10571.9 gi|15922591|ref|NP_378260.1| - 0.65 10.1 17.1 2 8.6 0.6 4.1 4 0 0 4 4 4 0 Uncharacterised protein family UPF0547 zf-RRN7 PF11781.8 gi|15922591|ref|NP_378260.1| - 0.7 9.6 9.5 1.5 8.5 0.1 3.9 4 0 0 4 4 4 0 Zinc-finger of RNA-polymerase I-specific TFIIB, Rrn7 DUF2752 PF10825.8 gi|15922591|ref|NP_378260.1| - 0.77 9.9 0.0 0.77 9.9 0.0 3.4 4 0 0 4 4 3 0 Protein of unknown function (DUF2752) Anti-TRAP PF15777.5 gi|15922591|ref|NP_378260.1| - 0.8 9.7 10.5 8.5 6.4 0.1 3.2 3 1 0 3 3 3 0 Tryptophan RNA-binding attenuator protein inhibitory protein Rpr2 PF04032.16 gi|15922591|ref|NP_378260.1| - 0.93 9.8 9.5 19 5.6 9.5 2.8 1 1 0 1 1 1 0 RNAse P Rpr2/Rpp21/SNM1 subunit domain Opy2 PF09463.10 gi|15922591|ref|NP_378260.1| - 1.1 9.7 10.1 5.3 7.4 0.0 3.9 4 0 0 4 4 4 0 Opy2 protein DUF3268 PF11672.8 gi|15922591|ref|NP_378260.1| - 1.4 9.3 6.8 14 6.0 1.5 2.5 2 1 0 2 2 2 0 zinc-finger-containing domain TackOD1 PF18551.1 gi|15922591|ref|NP_378260.1| - 1.5 8.4 7.5 0.84 9.3 0.6 2.8 2 1 0 2 2 2 0 Thaumarchaeal output domain 1 NRDD PF13597.6 gi|15922591|ref|NP_378260.1| - 1.8 7.2 5.2 2.3 6.9 1.1 2.1 2 0 0 2 2 2 0 Anaerobic ribonucleoside-triphosphate reductase HalOD2 PF18547.1 gi|15922591|ref|NP_378260.1| - 1.9 8.5 10.2 4.8 7.2 0.5 3.7 3 1 1 4 4 4 0 Halobacterial output domain 2 GFA PF04828.14 gi|15922591|ref|NP_378260.1| - 2.2 8.7 10.6 4.3 7.7 0.2 3.7 1 1 3 4 4 4 0 Glutathione-dependent formaldehyde-activating enzyme zf-Mss51 PF13824.6 gi|15922591|ref|NP_378260.1| - 2.2 8.4 14.5 5.3 7.2 4.5 3.2 1 1 0 2 2 2 0 Zinc-finger of mitochondrial splicing suppressor 51 DUF1610 PF07754.11 gi|15922591|ref|NP_378260.1| - 2.2 8.3 17.9 3 7.9 0.2 4.2 4 0 0 4 4 4 0 Domain of unknown function (DUF1610) zf-C2H2_4 PF13894.6 gi|15922591|ref|NP_378260.1| - 2.5 9.2 12.2 6.4 7.9 0.4 4.0 4 0 0 4 4 4 0 C2H2-type zinc finger NOB1_Zn_bind PF08772.11 gi|15922591|ref|NP_378260.1| - 2.6 8.3 13.7 3.7 7.8 0.7 4.0 3 1 1 4 4 4 0 Nin one binding (NOB1) Zn-ribbon like Rubredoxin PF00301.20 gi|15922591|ref|NP_378260.1| - 2.7 8.1 13.7 9.3 6.4 0.2 4.1 4 0 0 4 4 4 0 Rubredoxin Zn_ribbon_SprT PF17283.2 gi|15922591|ref|NP_378260.1| - 3 7.8 16.5 4 7.4 0.5 3.6 2 2 1 3 3 3 0 SprT-like zinc ribbon domain NMD3 PF04981.13 gi|15922591|ref|NP_378260.1| - 3.1 7.2 6.7 92 2.4 6.7 2.4 1 1 0 1 1 1 0 NMD3 family zf-RING_5 PF14634.6 gi|15922591|ref|NP_378260.1| - 3.8 7.5 9.7 31 4.6 0.0 3.3 3 1 0 3 3 3 0 zinc-RING finger domain Ogr_Delta PF04606.12 gi|15922591|ref|NP_378260.1| - 3.9 7.5 12.3 13 5.9 0.1 3.9 3 1 0 3 3 3 0 Ogr/Delta-like zinc finger C1_2 PF03107.16 gi|15922591|ref|NP_378260.1| - 4 7.9 12.4 8.9 6.7 1.8 3.1 2 1 0 2 2 2 0 C1 domain YacG PF03884.14 gi|15922591|ref|NP_378260.1| - 5 6.9 10.0 23 4.8 0.1 3.6 4 0 0 4 4 3 0 DNA gyrase inhibitor YacG RNHCP PF12647.7 gi|15922591|ref|NP_378260.1| - 5.8 7.0 9.0 2.7 8.0 0.9 2.9 2 2 1 3 3 3 0 RNHCP domain Rubredoxin_2 PF18073.1 gi|15922591|ref|NP_378260.1| - 7.4 6.4 16.9 6.5 6.6 0.4 4.2 4 0 0 4 4 4 0 Rubredoxin metal binding domain zf-ZPR1 PF03367.13 gi|15922591|ref|NP_378260.1| - 7.8 6.3 7.1 23 4.8 2.5 2.5 1 1 0 2 2 2 0 ZPR1 zinc-finger domain zinc_ribbon_15 PF17032.5 gi|15922591|ref|NP_378260.1| - 8.6 7.2 13.1 51 4.7 5.8 3.3 2 1 0 2 2 2 0 zinc-ribbon family RNA_pol_L_2 PF13656.6 gi|15922592|ref|NP_378261.1| - 1.2e-22 79.5 0.0 1.4e-22 79.2 0.0 1.1 1 0 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain RNA_pol_L PF01193.24 gi|15922592|ref|NP_378261.1| - 3.4e-12 45.6 0.0 5.1e-12 45.0 0.0 1.3 1 1 0 1 1 1 1 RNA polymerase Rpb3/Rpb11 dimerisation domain ECR1_N PF14382.6 gi|15922593|ref|NP_378262.1| - 2.4e-11 43.2 0.0 4.6e-11 42.3 0.0 1.5 1 0 0 1 1 1 1 Exosome complex exonuclease RRP4 N-terminal region DUF2318 PF10080.9 gi|15922593|ref|NP_378262.1| - 0.00044 20.3 0.1 0.00075 19.6 0.1 1.3 1 0 0 1 1 1 1 Predicted membrane protein (DUF2318) A2L_zn_ribbon PF08792.10 gi|15922593|ref|NP_378262.1| - 0.00065 19.3 1.8 0.0014 18.3 1.8 1.5 1 0 0 1 1 1 1 A2L zinc ribbon domain zf-NADH-PPase PF09297.11 gi|15922593|ref|NP_378262.1| - 0.0014 18.3 0.8 0.0023 17.5 0.8 1.4 1 0 0 1 1 1 1 NADH pyrophosphatase zinc ribbon domain zf-ribbon_3 PF13248.6 gi|15922593|ref|NP_378262.1| - 0.0021 17.4 3.7 0.16 11.5 0.7 2.2 1 1 1 2 2 2 2 zinc-ribbon domain TF_Zn_Ribbon PF08271.12 gi|15922593|ref|NP_378262.1| - 0.0021 17.5 1.0 0.0046 16.5 1.0 1.5 1 0 0 1 1 1 1 TFIIB zinc-binding HypA PF01155.19 gi|15922593|ref|NP_378262.1| - 0.0038 17.2 0.3 0.0059 16.6 0.3 1.4 1 1 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA OrfB_Zn_ribbon PF07282.11 gi|15922593|ref|NP_378262.1| - 0.0053 16.6 1.5 0.0098 15.8 1.5 1.4 1 0 0 1 1 1 1 Putative transposase DNA-binding domain DZR PF12773.7 gi|15922593|ref|NP_378262.1| - 0.0062 16.5 0.5 0.0098 15.9 0.5 1.2 1 0 0 1 1 1 1 Double zinc ribbon NOB1_Zn_bind PF08772.11 gi|15922593|ref|NP_378262.1| - 0.012 15.8 0.4 0.033 14.3 0.5 1.7 2 0 0 2 2 1 0 Nin one binding (NOB1) Zn-ribbon like tRNA-synt_1e PF01406.19 gi|15922593|ref|NP_378262.1| - 0.027 13.8 0.1 0.044 13.1 0.1 1.2 1 0 0 1 1 1 0 tRNA synthetases class I (C) catalytic domain DAN PF03045.15 gi|15922593|ref|NP_378262.1| - 0.047 13.7 0.1 0.074 13.1 0.1 1.2 1 0 0 1 1 1 0 DAN domain Prok-RING_1 PF14446.6 gi|15922593|ref|NP_378262.1| - 0.06 13.3 1.2 0.099 12.6 1.2 1.3 1 0 0 1 1 1 0 Prokaryotic RING finger family 1 Zn_Tnp_IS91 PF14319.6 gi|15922593|ref|NP_378262.1| - 0.065 13.3 0.2 0.13 12.3 0.2 1.4 1 0 0 1 1 1 0 Transposase zinc-binding domain Zn-ribbon_8 PF09723.10 gi|15922593|ref|NP_378262.1| - 0.068 13.3 1.7 0.068 13.3 1.7 1.8 2 0 0 2 2 2 0 Zinc ribbon domain DNA_RNApol_7kD PF03604.13 gi|15922593|ref|NP_378262.1| - 0.083 12.6 4.1 0.19 11.4 4.1 1.6 1 0 0 1 1 1 0 DNA directed RNA polymerase, 7 kDa subunit DUF3797 PF12677.7 gi|15922593|ref|NP_378262.1| - 0.084 12.8 2.1 0.16 11.9 0.3 2.2 1 1 1 2 2 2 0 Domain of unknown function (DUF3797) zinc-ribbons_6 PF07191.12 gi|15922593|ref|NP_378262.1| - 0.1 12.6 0.8 0.16 12.0 0.8 1.3 1 0 0 1 1 1 0 zinc-ribbons zinc_ribbon_2 PF13240.6 gi|15922593|ref|NP_378262.1| - 0.31 10.8 5.8 7 6.5 1.9 2.2 1 1 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_4 PF13717.6 gi|15922593|ref|NP_378262.1| - 0.53 10.2 3.7 11 6.0 3.6 2.4 1 1 0 1 1 1 0 zinc-ribbon domain Auto_anti-p27 PF06677.12 gi|15922593|ref|NP_378262.1| - 1.4 9.1 4.6 0.67 10.2 1.8 1.8 2 0 0 2 2 2 0 Sjogren's syndrome/scleroderma autoantigen 1 (Autoantigen p27) Diphthamide_syn PF01866.17 gi|15922594|ref|NP_378263.1| - 2.5e-77 260.3 0.0 2.9e-77 260.1 0.0 1.0 1 0 0 1 1 1 1 Putative diphthamide synthesis protein Ribosomal_L16 PF00252.18 gi|15922595|ref|NP_378264.1| - 8e-34 116.5 0.3 9.3e-34 116.3 0.3 1.0 1 0 0 1 1 1 1 Ribosomal protein L16p/L10e ArfA PF03889.13 gi|15922595|ref|NP_378264.1| - 0.047 13.2 0.1 0.16 11.4 0.1 1.9 2 0 0 2 2 2 0 Alternative ribosome-rescue factor A LPG_synthase_TM PF03706.13 gi|15922597|ref|NP_378266.1| - 4.7e-12 46.1 12.2 9.6e-12 45.0 12.2 1.4 1 1 0 1 1 1 1 Lysylphosphatidylglycerol synthase TM region DUF872 PF05915.12 gi|15922597|ref|NP_378266.1| - 0.29 11.3 5.1 0.86 9.8 0.1 2.8 3 0 0 3 3 3 0 Eukaryotic protein of unknown function (DUF872) ThiF PF00899.21 gi|15922598|ref|NP_378267.1| - 1.7e-59 201.1 0.2 2.2e-59 200.8 0.2 1.0 1 0 0 1 1 1 1 ThiF family NAD_binding_7 PF13241.6 gi|15922598|ref|NP_378267.1| - 0.031 14.7 0.1 0.06 13.8 0.1 1.5 1 0 0 1 1 1 0 Putative NAD(P)-binding TrkA_N PF02254.18 gi|15922598|ref|NP_378267.1| - 0.037 14.3 0.5 0.087 13.1 0.2 1.8 1 1 0 1 1 1 0 TrkA-N domain DUF2007 PF09413.10 gi|15922598|ref|NP_378267.1| - 0.12 12.6 0.5 0.54 10.5 0.1 2.2 2 0 0 2 2 2 0 Putative prokaryotic signal transducing protein Shikimate_DH PF01488.20 gi|15922598|ref|NP_378267.1| - 0.15 12.1 1.2 0.77 9.8 0.9 2.3 2 1 0 2 2 2 0 Shikimate / quinate 5-dehydrogenase Sacchrp_dh_NADP PF03435.18 gi|15922598|ref|NP_378267.1| - 0.84 9.9 2.9 5.7 7.2 2.9 2.1 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain EndIII_4Fe-2S PF10576.9 gi|15922598|ref|NP_378267.1| - 2.6 8.5 5.0 14 6.1 0.1 3.2 3 0 0 3 3 3 0 Iron-sulfur binding domain of endonuclease III Transketolase_N PF00456.21 gi|15922599|ref|NP_378268.1| - 3e-31 108.6 0.0 7.4e-31 107.3 0.0 1.5 1 1 0 1 1 1 1 Transketolase, thiamine diphosphate binding domain DXP_synthase_N PF13292.6 gi|15922599|ref|NP_378268.1| - 2.1e-10 40.3 0.0 1.5e-07 31.0 0.0 2.2 1 1 1 2 2 2 2 1-deoxy-D-xylulose-5-phosphate synthase E1_dh PF00676.20 gi|15922599|ref|NP_378268.1| - 8e-07 28.3 0.0 1.4e-06 27.5 0.0 1.4 1 0 0 1 1 1 1 Dehydrogenase E1 component TPP_enzyme_C PF02775.21 gi|15922599|ref|NP_378268.1| - 5.1e-06 26.3 0.6 0.00012 22.0 0.6 2.2 1 1 0 1 1 1 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain XFP_N PF09364.10 gi|15922599|ref|NP_378268.1| - 0.00023 20.1 0.1 0.00032 19.6 0.1 1.2 1 0 0 1 1 1 1 XFP N-terminal domain ArAE_2 PF10334.9 gi|15922599|ref|NP_378268.1| - 0.054 13.3 0.0 0.078 12.8 0.0 1.2 1 0 0 1 1 1 0 Aromatic acid exporter family member 2 Transket_pyr PF02779.24 gi|15922600|ref|NP_378269.1| - 3.1e-37 128.0 0.0 4.5e-37 127.5 0.0 1.2 1 0 0 1 1 1 1 Transketolase, pyrimidine binding domain Transketolase_C PF02780.20 gi|15922600|ref|NP_378269.1| - 1.6e-29 102.3 0.1 3.6e-29 101.2 0.1 1.6 1 0 0 1 1 1 1 Transketolase, C-terminal domain PFOR_II PF17147.4 gi|15922600|ref|NP_378269.1| - 0.0024 18.1 0.1 0.0061 16.8 0.1 1.7 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II PDH PF02153.17 gi|15922601|ref|NP_378270.1| - 5.7e-18 64.8 0.0 9.7e-18 64.1 0.0 1.3 1 0 0 1 1 1 1 Prephenate dehydrogenase CM_2 PF01817.21 gi|15922601|ref|NP_378270.1| - 5.8e-15 55.4 1.4 1.7e-14 53.9 1.0 2.0 2 0 0 2 2 2 1 Chorismate mutase type II F420_oxidored PF03807.17 gi|15922601|ref|NP_378270.1| - 2.6e-10 40.7 0.0 8.5e-10 39.1 0.0 1.9 2 0 0 2 2 2 1 NADP oxidoreductase coenzyme F420-dependent Shikimate_DH PF01488.20 gi|15922601|ref|NP_378270.1| - 5.4e-07 29.8 0.0 1.5e-06 28.3 0.0 1.7 2 0 0 2 2 2 1 Shikimate / quinate 5-dehydrogenase 3HCDH_N PF02737.18 gi|15922601|ref|NP_378270.1| - 0.00035 20.5 0.1 0.0013 18.7 0.1 2.0 1 1 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 2-Hacid_dh_C PF02826.19 gi|15922601|ref|NP_378270.1| - 0.00041 19.8 0.0 0.00078 18.8 0.0 1.4 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain TrkA_N PF02254.18 gi|15922601|ref|NP_378270.1| - 0.0039 17.4 0.1 0.012 15.8 0.0 1.9 2 1 0 2 2 2 1 TrkA-N domain Sacchrp_dh_NADP PF03435.18 gi|15922601|ref|NP_378270.1| - 0.0098 16.2 0.0 0.019 15.2 0.0 1.5 1 0 0 1 1 1 1 Saccharopine dehydrogenase NADP binding domain NAD_binding_2 PF03446.15 gi|15922601|ref|NP_378270.1| - 0.01 16.0 0.0 0.022 15.0 0.0 1.6 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase IlvN PF07991.12 gi|15922601|ref|NP_378270.1| - 0.012 15.1 0.0 0.024 14.2 0.0 1.5 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain Lge1 PF11488.8 gi|15922601|ref|NP_378270.1| - 0.63 10.3 3.1 0.57 10.4 0.2 2.5 3 0 0 3 3 3 0 Transcriptional regulatory protein LGE1 DAHP_synth_1 PF00793.20 gi|15922602|ref|NP_378271.1| - 6.4e-73 245.0 0.0 8.3e-73 244.6 0.0 1.0 1 0 0 1 1 1 1 DAHP synthetase I family NeuB PF03102.14 gi|15922602|ref|NP_378271.1| - 4.4e-11 42.7 0.2 3.4e-06 26.7 0.0 2.7 2 1 1 3 3 3 2 NeuB family A_deaminase PF00962.22 gi|15922602|ref|NP_378271.1| - 0.077 12.3 0.0 0.12 11.7 0.0 1.2 1 0 0 1 1 1 0 Adenosine/AMP deaminase DHQ_synthase PF01761.20 gi|15922603|ref|NP_378272.1| - 1.5e-94 316.1 0.4 1.8e-94 315.8 0.4 1.1 1 0 0 1 1 1 1 3-dehydroquinate synthase Fe-ADH_2 PF13685.6 gi|15922603|ref|NP_378272.1| - 5.2e-08 32.9 0.0 9.3e-08 32.1 0.0 1.5 1 1 0 1 1 1 1 Iron-containing alcohol dehydrogenase Fe-ADH PF00465.19 gi|15922603|ref|NP_378272.1| - 7.8e-07 28.2 0.1 3.9e-05 22.6 0.1 2.2 2 0 0 2 2 2 2 Iron-containing alcohol dehydrogenase Shikimate_dh_N PF08501.11 gi|15922604|ref|NP_378273.1| - 8.5e-27 93.2 0.4 2e-24 85.7 0.1 2.5 2 0 0 2 2 2 2 Shikimate dehydrogenase substrate binding domain Shikimate_DH PF01488.20 gi|15922604|ref|NP_378273.1| - 6.3e-07 29.5 0.0 1.2e-06 28.7 0.0 1.4 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase SDH_C PF18317.1 gi|15922604|ref|NP_378273.1| - 0.0024 17.6 0.0 0.0041 16.9 0.0 1.4 1 0 0 1 1 1 1 Shikimate 5'-dehydrogenase C-terminal domain OCD_Mu_crystall PF02423.15 gi|15922604|ref|NP_378273.1| - 0.03 13.3 0.1 0.05 12.5 0.1 1.4 1 1 0 1 1 1 0 Ornithine cyclodeaminase/mu-crystallin family Sacchrp_dh_NADP PF03435.18 gi|15922604|ref|NP_378273.1| - 0.047 13.9 0.1 0.095 13.0 0.1 1.6 1 1 0 1 1 1 0 Saccharopine dehydrogenase NADP binding domain NAD_binding_7 PF13241.6 gi|15922604|ref|NP_378273.1| - 0.057 13.9 0.1 0.12 12.8 0.1 1.6 1 1 0 1 1 1 0 Putative NAD(P)-binding AlaDh_PNT_C PF01262.21 gi|15922604|ref|NP_378273.1| - 0.11 11.8 0.0 0.18 11.1 0.0 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Chorismate_synt PF01264.21 gi|15922605|ref|NP_378274.1| - 6.1e-126 419.5 0.0 7.1e-126 419.3 0.0 1.0 1 0 0 1 1 1 1 Chorismate synthase GHMP_kinases_N PF00288.26 gi|15922607|ref|NP_378276.1| - 2.3e-08 34.1 0.6 4.3e-08 33.3 0.2 1.7 2 0 0 2 2 2 1 GHMP kinases N terminal domain GHMP_kinases_C PF08544.13 gi|15922607|ref|NP_378276.1| - 0.00071 19.9 0.1 0.0018 18.6 0.1 1.7 1 0 0 1 1 1 1 GHMP kinases C terminal PP-binding PF00550.25 gi|15922607|ref|NP_378276.1| - 0.033 14.6 0.0 0.11 12.8 0.0 1.9 2 0 0 2 2 2 0 Phosphopantetheine attachment site EPSP_synthase PF00275.20 gi|15922608|ref|NP_378277.1| - 4e-67 226.7 0.0 4.8e-67 226.5 0.0 1.0 1 0 0 1 1 1 1 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DHquinase_I PF01487.15 gi|15922609|ref|NP_378278.1| - 9.4e-09 35.8 0.4 4.7e-08 33.6 0.4 1.9 1 1 0 1 1 1 1 Type I 3-dehydroquinase Rieske PF00355.26 gi|15922610|ref|NP_378279.1| - 8e-16 57.8 0.0 1e-15 57.4 0.0 1.1 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain Rieske_2 PF13806.6 gi|15922610|ref|NP_378279.1| - 4.3e-10 39.5 0.0 6.2e-10 39.0 0.0 1.2 1 0 0 1 1 1 1 Rieske-like [2Fe-2S] domain AnfO_nitrog PF09582.10 gi|15922610|ref|NP_378279.1| - 0.12 11.7 0.0 0.18 11.1 0.0 1.2 1 0 0 1 1 1 0 Iron only nitrogenase protein AnfO (AnfO_nitrog) Helicase_C_2 PF13307.6 gi|15922611|ref|NP_378280.1| - 9e-26 91.1 0.0 2.6e-25 89.5 0.0 1.8 1 0 0 1 1 1 1 Helicase C-terminal domain DEAD_2 PF06733.15 gi|15922611|ref|NP_378280.1| - 1.8e-16 60.3 1.1 6.4e-16 58.5 1.1 2.0 1 0 0 1 1 1 1 DEAD_2 ResIII PF04851.15 gi|15922611|ref|NP_378280.1| - 8.4e-08 32.4 1.3 4.8e-07 29.9 0.2 2.7 2 1 0 2 2 2 1 Type III restriction enzyme, res subunit DEAD PF00270.29 gi|15922611|ref|NP_378280.1| - 2.8e-05 24.0 0.2 0.06 13.1 0.0 3.6 4 1 0 4 4 4 2 DEAD/DEAH box helicase PhoH PF02562.16 gi|15922611|ref|NP_378280.1| - 0.0072 15.8 0.4 0.53 9.7 0.0 2.9 2 1 0 2 2 2 1 PhoH-like protein DUF2179 PF10035.9 gi|15922611|ref|NP_378280.1| - 0.057 13.2 0.2 0.42 10.4 0.0 2.6 2 0 0 2 2 2 0 Uncharacterized protein conserved in bacteria (DUF2179) DUF4238 PF14022.6 gi|15922611|ref|NP_378280.1| - 0.059 12.9 0.6 0.12 11.8 0.6 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF4238) MCM_lid PF17855.1 gi|15922611|ref|NP_378280.1| - 0.06 13.8 0.8 0.23 11.9 0.1 2.3 2 0 0 2 2 2 0 MCM AAA-lid domain Thioredoxin_3 PF13192.6 gi|15922612|ref|NP_378281.1| - 6.2e-09 35.8 0.0 1.5e-08 34.6 0.0 1.7 1 0 0 1 1 1 1 Thioredoxin domain Glutaredoxin PF00462.24 gi|15922612|ref|NP_378281.1| - 0.0017 18.5 0.0 0.0043 17.2 0.0 1.7 1 0 0 1 1 1 1 Glutaredoxin Thioredoxin_4 PF13462.6 gi|15922612|ref|NP_378281.1| - 0.036 14.2 0.0 0.091 12.9 0.0 1.6 1 0 0 1 1 1 0 Thioredoxin TetR_C_26 PF17934.1 gi|15922612|ref|NP_378281.1| - 0.31 11.4 0.0 0.31 11.4 0.0 2.7 3 1 0 3 3 3 0 Tetracyclin repressor-like, C-terminal domain TusA PF01206.17 gi|15922613|ref|NP_378282.1| - 7.5e-05 22.5 0.1 7.9e-05 22.4 0.1 1.3 1 1 0 1 1 1 1 Sulfurtransferase TusA DUF5082 PF16888.5 gi|15922614|ref|NP_378283.1| - 0.076 13.3 10.9 0.47 10.7 2.0 3.0 2 1 1 3 3 3 0 Domain of unknown function (DUF5082) ApoLp-III PF07464.11 gi|15922614|ref|NP_378283.1| - 1.4 9.0 6.4 0.16 12.0 0.5 2.4 3 0 0 3 3 3 0 Apolipophorin-III precursor (apoLp-III) CCDC-167 PF15188.6 gi|15922614|ref|NP_378283.1| - 3.3 8.1 7.6 1.4 9.3 0.1 3.4 4 0 0 4 4 4 0 Coiled-coil domain-containing protein 167 Sod_Fe_C PF02777.18 gi|15922615|ref|NP_378284.1| - 5.8e-33 113.1 0.7 9.8e-33 112.4 0.7 1.4 1 0 0 1 1 1 1 Iron/manganese superoxide dismutases, C-terminal domain Sod_Fe_N PF00081.22 gi|15922615|ref|NP_378284.1| - 2.1e-28 98.6 0.1 2.1e-28 98.6 0.1 2.4 3 0 0 3 3 3 1 Iron/manganese superoxide dismutases, alpha-hairpin domain Thioredoxin_6 PF13848.6 gi|15922615|ref|NP_378284.1| - 0.049 13.5 0.0 0.077 12.9 0.0 1.2 1 0 0 1 1 1 0 Thioredoxin-like domain NTP_transferase PF00483.23 gi|15922616|ref|NP_378285.1| - 3.6e-35 121.7 0.0 5.5e-35 121.1 0.0 1.2 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|15922616|ref|NP_378285.1| - 5.2e-12 46.4 0.0 6.5e-12 46.1 0.0 1.2 1 0 0 1 1 1 1 MobA-like NTP transferase domain Hexapep PF00132.24 gi|15922616|ref|NP_378285.1| - 1.7e-05 24.4 2.7 0.006 16.3 0.2 3.1 1 1 3 4 4 4 3 Bacterial transferase hexapeptide (six repeats) Hexapep_2 PF14602.6 gi|15922616|ref|NP_378285.1| - 0.0045 16.7 4.5 0.7 9.7 0.1 2.9 3 0 0 3 3 3 2 Hexapeptide repeat of succinyl-transferase Fucokinase PF07959.12 gi|15922616|ref|NP_378285.1| - 0.0081 15.1 0.0 0.012 14.6 0.0 1.3 1 0 0 1 1 1 1 L-fucokinase GPI PF06560.11 gi|15922616|ref|NP_378285.1| - 0.0098 15.2 0.0 0.02 14.2 0.0 1.5 1 0 0 1 1 1 1 Glucose-6-phosphate isomerase (GPI) Thioredox_DsbH PF03190.15 gi|15922618|ref|NP_378287.1| - 1.3e-66 223.6 0.0 2.2e-66 222.8 0.0 1.3 1 0 0 1 1 1 1 Protein of unknown function, DUF255 Thioredoxin_7 PF13899.6 gi|15922618|ref|NP_378287.1| - 5.7e-17 61.7 0.0 1.1e-16 60.8 0.0 1.5 1 0 0 1 1 1 1 Thioredoxin-like Thioredoxin_2 PF13098.6 gi|15922618|ref|NP_378287.1| - 1.2e-05 25.7 0.0 2.6e-05 24.6 0.0 1.6 1 0 0 1 1 1 1 Thioredoxin-like domain Thioredoxin PF00085.20 gi|15922618|ref|NP_378287.1| - 0.00018 21.4 0.1 0.00045 20.2 0.1 1.6 1 0 0 1 1 1 1 Thioredoxin Glyco_hydro_88 PF07470.13 gi|15922618|ref|NP_378287.1| - 0.009 15.1 0.1 3.8 6.5 0.0 2.4 2 0 0 2 2 2 2 Glycosyl Hydrolase Family 88 Glyco_hydro_127 PF07944.12 gi|15922618|ref|NP_378287.1| - 0.018 13.6 0.1 0.041 12.4 0.1 1.6 1 1 1 2 2 2 0 Beta-L-arabinofuranosidase, GH127 AHJR-like PF18743.1 gi|15922618|ref|NP_378287.1| - 0.025 14.1 0.0 0.065 12.8 0.0 1.6 1 0 0 1 1 1 0 REase_AHJR-like adh_short_C2 PF13561.6 gi|15922619|ref|NP_378288.1| - 1.2e-26 93.7 0.0 1.6e-26 93.3 0.0 1.2 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|15922619|ref|NP_378288.1| - 8e-24 84.2 0.0 9.7e-24 83.9 0.0 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|15922619|ref|NP_378288.1| - 2.5e-05 24.3 0.2 5.5e-05 23.2 0.2 1.6 1 1 0 1 1 1 1 KR domain THF_DHG_CYH_C PF02882.19 gi|15922619|ref|NP_378288.1| - 0.00034 20.0 0.0 0.0012 18.2 0.0 1.9 1 1 0 1 1 1 1 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain NAD_binding_10 PF13460.6 gi|15922619|ref|NP_378288.1| - 0.0035 17.3 0.1 0.0054 16.6 0.1 1.6 1 1 0 1 1 1 1 NAD(P)H-binding Epimerase PF01370.21 gi|15922619|ref|NP_378288.1| - 0.0039 16.7 0.2 0.0088 15.5 0.1 1.6 2 0 0 2 2 2 1 NAD dependent epimerase/dehydratase family DUF460 PF04312.13 gi|15922619|ref|NP_378288.1| - 0.0081 15.9 0.1 0.014 15.1 0.1 1.4 1 0 0 1 1 1 1 Protein of unknown function (DUF460) F420_oxidored PF03807.17 gi|15922619|ref|NP_378288.1| - 0.012 16.2 0.4 0.031 14.9 0.1 1.8 2 1 0 2 2 1 0 NADP oxidoreductase coenzyme F420-dependent NAD_binding_7 PF13241.6 gi|15922619|ref|NP_378288.1| - 0.013 15.9 0.1 0.044 14.2 0.1 1.8 2 0 0 2 2 2 0 Putative NAD(P)-binding Shikimate_DH PF01488.20 gi|15922619|ref|NP_378288.1| - 0.027 14.5 0.2 0.047 13.7 0.2 1.5 1 1 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase NAD_binding_2 PF03446.15 gi|15922619|ref|NP_378288.1| - 0.04 14.1 0.1 0.074 13.2 0.1 1.5 1 0 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase 3HCDH_N PF02737.18 gi|15922619|ref|NP_378288.1| - 0.043 13.7 0.3 0.057 13.3 0.3 1.2 1 0 0 1 1 1 0 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DUF4208 PF13907.6 gi|15922619|ref|NP_378288.1| - 0.072 13.5 0.1 2 8.9 0.1 2.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4208) ADH_zinc_N PF00107.26 gi|15922619|ref|NP_378288.1| - 0.15 12.1 0.2 0.56 10.2 0.2 2.2 1 1 0 1 1 1 0 Zinc-binding dehydrogenase CDC48_2 PF02933.17 gi|15922620|ref|NP_378289.1| - 0.068 13.0 1.0 0.24 11.2 0.0 2.2 3 0 0 3 3 3 0 Cell division protein 48 (CDC48), domain 2 NucS PF01939.16 gi|15922622|ref|NP_378291.1| - 3.3e-58 196.7 0.0 4e-58 196.5 0.0 1.0 1 0 0 1 1 1 1 Endonuclease NucS Glycos_transf_2 PF00535.26 gi|15922623|ref|NP_378292.1| - 1.2e-20 74.0 0.0 1.9e-20 73.3 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.6 gi|15922623|ref|NP_378292.1| - 3.5e-11 42.9 0.0 6.1e-11 42.1 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 21 Glyco_tranf_2_3 PF13641.6 gi|15922623|ref|NP_378292.1| - 1.8e-10 41.1 0.0 3.1e-10 40.3 0.0 1.3 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_2 PF10111.9 gi|15922623|ref|NP_378292.1| - 0.064 12.7 0.0 0.091 12.2 0.0 1.2 1 0 0 1 1 1 0 Glycosyltransferase like family 2 DUF5343 PF17278.2 gi|15922625|ref|NP_378294.1| - 0.044 13.9 0.0 0.05 13.7 0.0 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5343) AAA_31 PF13614.6 gi|15922626|ref|NP_378295.1| - 1.1e-30 106.9 4.0 3.4e-30 105.3 4.0 1.7 1 1 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|15922626|ref|NP_378295.1| - 1.2e-14 54.5 0.3 1.5e-14 54.2 0.3 1.2 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|15922626|ref|NP_378295.1| - 2.2e-12 47.0 3.5 4e-11 42.8 3.5 2.0 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase MipZ PF09140.11 gi|15922626|ref|NP_378295.1| - 3.9e-12 46.0 0.1 5e-12 45.7 0.1 1.1 1 0 0 1 1 1 1 ATPase MipZ ArsA_ATPase PF02374.15 gi|15922626|ref|NP_378295.1| - 3.1e-09 36.4 1.9 1.1e-06 28.1 0.2 2.4 1 1 1 2 2 2 2 Anion-transporting ATPase CBP_BcsQ PF06564.12 gi|15922626|ref|NP_378295.1| - 2.7e-07 30.3 0.0 0.0014 18.2 0.0 2.1 2 0 0 2 2 2 2 Cellulose biosynthesis protein BcsQ RuvB_N PF05496.12 gi|15922626|ref|NP_378295.1| - 0.0018 18.0 0.3 0.0041 16.9 0.1 1.7 2 0 0 2 2 2 1 Holliday junction DNA helicase RuvB P-loop domain Fer4_NifH PF00142.18 gi|15922626|ref|NP_378295.1| - 0.0029 17.1 0.1 0.0059 16.1 0.1 1.5 1 0 0 1 1 1 1 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CLP1_P PF16575.5 gi|15922626|ref|NP_378295.1| - 0.011 15.5 0.2 0.75 9.6 0.0 2.2 2 0 0 2 2 2 0 mRNA cleavage and polyadenylation factor CLP1 P-loop AAA_24 PF13479.6 gi|15922626|ref|NP_378295.1| - 0.019 14.7 0.1 0.045 13.5 0.1 1.6 1 1 0 1 1 1 0 AAA domain DUF2184 PF09950.9 gi|15922626|ref|NP_378295.1| - 0.02 14.3 0.0 0.033 13.6 0.0 1.3 1 0 0 1 1 1 0 Uncharacterized protein conserved in bacteria (DUF2184) SRP54 PF00448.22 gi|15922626|ref|NP_378295.1| - 0.025 14.2 0.3 0.19 11.3 0.1 2.1 2 0 0 2 2 2 0 SRP54-type protein, GTPase domain VirC1 PF07015.11 gi|15922626|ref|NP_378295.1| - 0.059 12.7 0.0 0.12 11.6 0.0 1.5 1 0 0 1 1 1 0 VirC1 protein ATP_bind_1 PF03029.17 gi|15922626|ref|NP_378295.1| - 0.078 12.8 0.4 0.23 11.2 0.4 1.7 1 1 0 1 1 1 0 Conserved hypothetical ATP binding protein CCG PF02754.16 gi|15922627|ref|NP_378296.1| - 5.8e-16 58.5 0.4 1e-07 32.0 0.0 2.5 2 0 0 2 2 2 2 Cysteine-rich domain Fer4_8 PF13183.6 gi|15922627|ref|NP_378296.1| - 1.5e-11 44.6 6.3 3.2e-11 43.5 6.3 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15922627|ref|NP_378296.1| - 4.5e-11 43.2 7.8 9.9e-11 42.1 7.8 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|15922627|ref|NP_378296.1| - 1.9e-10 41.1 5.7 4.3e-10 40.0 5.7 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|15922627|ref|NP_378296.1| - 9e-09 34.8 11.7 0.00016 21.3 2.1 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_16 PF13484.6 gi|15922627|ref|NP_378296.1| - 4.5e-08 33.9 3.7 0.004 18.1 0.1 2.8 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4_9 PF13187.6 gi|15922627|ref|NP_378296.1| - 2.4e-07 30.8 6.0 1e-06 28.8 6.2 2.0 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15922627|ref|NP_378296.1| - 2e-06 27.8 9.3 0.00014 21.9 11.1 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15922627|ref|NP_378296.1| - 1.9e-05 24.5 11.3 0.00073 19.5 1.2 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|15922627|ref|NP_378296.1| - 2.2e-05 24.3 13.2 0.0016 18.4 2.2 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|15922627|ref|NP_378296.1| - 0.00011 22.4 11.3 0.013 16.0 1.8 2.7 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_3 PF12798.7 gi|15922627|ref|NP_378296.1| - 0.011 16.6 17.6 0.43 11.6 5.3 2.7 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_21 PF14697.6 gi|15922627|ref|NP_378296.1| - 0.021 14.9 11.6 0.2 11.8 11.4 2.3 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_18 PF13746.6 gi|15922627|ref|NP_378296.1| - 0.053 13.7 6.9 0.42 10.8 1.1 2.4 1 1 1 2 2 2 0 4Fe-4S dicluster domain Fer4_22 PF17179.4 gi|15922627|ref|NP_378296.1| - 0.66 10.9 14.2 9.8 7.1 2.5 3.3 2 1 3 5 5 5 0 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|15922627|ref|NP_378296.1| - 1.4 9.5 8.2 3.4 8.3 0.8 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I FAD-oxidase_C PF02913.19 gi|15922628|ref|NP_378297.1| - 8e-53 179.6 0.0 1e-52 179.3 0.0 1.1 1 0 0 1 1 1 1 FAD linked oxidases, C-terminal domain FAD_binding_4 PF01565.23 gi|15922628|ref|NP_378297.1| - 2.6e-28 98.5 0.0 4e-28 97.9 0.0 1.3 1 0 0 1 1 1 1 FAD binding domain BBE PF08031.12 gi|15922628|ref|NP_378297.1| - 0.00091 19.3 1.1 0.0016 18.5 0.0 2.0 2 0 0 2 2 2 1 Berberine and berberine like FAD_binding_4 PF01565.23 gi|15922629|ref|NP_378298.1| - 4.2e-15 55.7 0.0 9.6e-15 54.5 0.0 1.6 2 0 0 2 2 2 1 FAD binding domain TPP_enzyme_C PF02775.21 gi|15922631|ref|NP_378300.1| - 1.7e-30 105.9 0.1 9.4e-30 103.4 0.0 2.0 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFO_beta_C PF12367.8 gi|15922631|ref|NP_378300.1| - 1e-24 86.4 0.2 1.8e-24 85.6 0.2 1.4 1 0 0 1 1 1 1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal DUF3797 PF12677.7 gi|15922631|ref|NP_378300.1| - 0.081 12.8 0.1 0.18 11.7 0.1 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF3797) Peptidase_M22 PF00814.25 gi|15922631|ref|NP_378300.1| - 0.15 11.7 0.0 0.33 10.6 0.0 1.5 1 1 0 1 1 1 0 Glycoprotease family POR_N PF01855.19 gi|15922633|ref|NP_378302.1| - 4.5e-71 239.3 0.0 6.7e-71 238.7 0.0 1.2 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg POR PF01558.18 gi|15922633|ref|NP_378302.1| - 9e-33 113.8 1.3 2.1e-32 112.6 0.3 1.9 2 0 0 2 2 2 1 Pyruvate ferredoxin/flavodoxin oxidoreductase PFOR_II PF17147.4 gi|15922633|ref|NP_378302.1| - 5.2e-05 23.5 0.0 0.00026 21.3 0.0 2.3 1 0 0 1 1 1 1 Pyruvate:ferredoxin oxidoreductase core domain II TPP_enzyme_N PF02776.18 gi|15922633|ref|NP_378302.1| - 0.00013 21.6 1.1 0.00063 19.4 1.0 2.2 1 1 1 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Transketolase_C PF02780.20 gi|15922633|ref|NP_378302.1| - 0.0038 17.1 0.0 0.019 14.9 0.0 2.2 2 0 0 2 2 2 1 Transketolase, C-terminal domain LytR_C PF13399.6 gi|15922633|ref|NP_378302.1| - 0.0052 17.7 1.3 0.02 15.8 0.0 2.5 3 0 0 3 3 3 1 LytR cell envelope-related transcriptional attenuator DUF4618 PF15397.6 gi|15922633|ref|NP_378302.1| - 0.049 13.1 0.1 0.089 12.2 0.1 1.4 1 0 0 1 1 1 0 Domain of unknown function (DUF4618) Eco57I PF07669.11 gi|15922634|ref|NP_378303.1| - 0.015 15.7 1.6 0.14 12.6 0.3 2.8 1 1 2 3 3 3 0 Eco57I restriction-modification methylase TLP-20 PF06088.11 gi|15922635|ref|NP_378304.1| - 0.034 14.1 1.0 0.049 13.5 1.0 1.3 1 0 0 1 1 1 0 Nucleopolyhedrovirus telokin-like protein-20 (TLP20) CBS PF00571.28 gi|15922637|ref|NP_378306.1| - 9.8e-33 112.4 10.5 6.1e-13 49.0 0.1 4.5 5 0 0 5 5 5 4 CBS domain Ribosomal_S30AE PF02482.19 gi|15922637|ref|NP_378306.1| - 8.8e-06 26.4 3.2 5.5e-05 23.9 3.1 2.2 1 1 1 2 2 2 2 Sigma 54 modulation protein / S30EA ribosomal protein GARP PF16731.5 gi|15922637|ref|NP_378306.1| - 0.00093 18.9 0.4 0.0015 18.2 0.4 1.3 1 0 0 1 1 1 1 Glutamic acid/alanine-rich protein of Trypanosoma U-box PF04564.15 gi|15922637|ref|NP_378306.1| - 0.02 15.1 1.0 5.1 7.4 0.0 3.7 4 0 0 4 4 4 0 U-box domain H_kinase_N PF12282.8 gi|15922637|ref|NP_378306.1| - 0.1 12.5 3.5 0.27 11.2 0.5 2.8 1 1 1 2 2 2 0 Signal transduction histidine kinase Hist_deacetyl PF00850.19 gi|15922638|ref|NP_378307.1| - 7.7e-77 258.8 0.0 1.1e-76 258.3 0.0 1.2 1 0 0 1 1 1 1 Histone deacetylase domain ATP-grasp PF02222.22 gi|15922639|ref|NP_378308.1| - 5.5e-43 146.5 0.1 1e-42 145.6 0.1 1.4 1 0 0 1 1 1 1 ATP-grasp domain CPSase_L_D2 PF02786.17 gi|15922639|ref|NP_378308.1| - 5.4e-14 52.2 0.0 1e-13 51.3 0.0 1.5 1 0 0 1 1 1 1 Carbamoyl-phosphate synthase L chain, ATP binding domain Dala_Dala_lig_C PF07478.13 gi|15922639|ref|NP_378308.1| - 8.2e-12 45.1 0.2 1.7e-11 44.0 0.2 1.5 1 0 0 1 1 1 1 D-ala D-ala ligase C-terminus ATP-grasp_3 PF02655.14 gi|15922639|ref|NP_378308.1| - 3.3e-09 37.0 0.2 7.6e-09 35.8 0.2 1.6 1 0 0 1 1 1 1 ATP-grasp domain GARS_A PF01071.19 gi|15922639|ref|NP_378308.1| - 2e-07 31.0 0.5 1.4e-06 28.2 0.1 2.2 2 0 0 2 2 2 1 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain LAL_C2 PF18603.1 gi|15922639|ref|NP_378308.1| - 0.00026 21.1 0.1 0.00084 19.5 0.0 1.9 2 0 0 2 2 2 1 L-amino acid ligase C-terminal domain 2 ATP-grasp_4 PF13535.6 gi|15922639|ref|NP_378308.1| - 0.00034 20.2 0.4 0.00072 19.2 0.4 1.6 1 0 0 1 1 1 1 ATP-grasp domain ATPgrasp_ST PF14397.6 gi|15922639|ref|NP_378308.1| - 0.00049 19.4 0.1 0.0013 18.0 0.3 1.6 2 0 0 2 2 2 1 Sugar-transfer associated ATP-grasp PurK_C PF17769.1 gi|15922639|ref|NP_378308.1| - 0.0031 17.2 0.0 0.0066 16.1 0.0 1.6 1 0 0 1 1 1 1 Phosphoribosylaminoimidazole carboxylase C-terminal domain ATP-grasp_5 PF13549.6 gi|15922639|ref|NP_378308.1| - 0.0035 16.8 0.2 0.023 14.2 0.1 2.1 2 0 0 2 2 2 1 ATP-grasp domain Pyr_redox PF00070.27 gi|15922639|ref|NP_378308.1| - 0.078 13.5 3.2 4.2 8.0 0.4 3.6 3 1 1 4 4 3 0 Pyridine nucleotide-disulphide oxidoreductase Epimerase PF01370.21 gi|15922639|ref|NP_378308.1| - 0.09 12.2 0.0 0.15 11.5 0.0 1.3 1 0 0 1 1 1 0 NAD dependent epimerase/dehydratase family ATPgrasp_N PF18130.1 gi|15922639|ref|NP_378308.1| - 0.09 13.3 0.1 0.7 10.5 0.1 2.5 2 0 0 2 2 2 0 ATP-grasp N-terminal domain DUF4143 PF13635.6 gi|15922641|ref|NP_378310.1| - 0.0041 17.3 0.3 0.0063 16.7 0.3 1.4 1 0 0 1 1 1 1 Domain of unknown function (DUF4143) NUMOD1 PF07453.13 gi|15922641|ref|NP_378310.1| - 0.55 10.6 5.1 5.2 7.5 0.4 3.2 3 0 0 3 3 3 0 NUMOD1 domain Caps_synth_CapC PF14102.6 gi|15922642|ref|NP_378311.1| - 0.17 12.4 8.6 1.4 9.4 8.4 2.3 1 1 1 2 2 2 0 Capsule biosynthesis CapC DAO PF01266.24 gi|15922645|ref|NP_378314.1| - 1.1e-12 48.3 0.0 1.7e-07 31.2 0.0 2.2 2 0 0 2 2 2 2 FAD dependent oxidoreductase Pyr_redox PF00070.27 gi|15922645|ref|NP_378314.1| - 0.013 16.0 0.0 0.029 14.9 0.0 1.6 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_2 PF07992.14 gi|15922645|ref|NP_378314.1| - 0.014 14.6 0.0 0.018 14.2 0.0 1.2 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase UDPG_MGDP_dh_N PF03721.14 gi|15922645|ref|NP_378314.1| - 0.049 13.2 0.2 0.1 12.2 0.2 1.5 1 0 0 1 1 1 0 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ApbA PF02558.16 gi|15922645|ref|NP_378314.1| - 0.078 12.6 0.0 0.13 11.9 0.0 1.4 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA MoCF_biosynth PF00994.24 gi|15922647|ref|NP_378316.1| - 1.3e-34 118.9 0.1 1.5e-34 118.8 0.1 1.0 1 0 0 1 1 1 1 Probable molybdopterin binding domain Fer4_10 PF13237.6 gi|15922648|ref|NP_378317.1| - 6.7e-08 32.5 10.0 4.5e-06 26.7 12.0 2.4 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_8 PF13183.6 gi|15922648|ref|NP_378317.1| - 7.3e-08 32.7 5.1 1.5e-07 31.7 5.1 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15922648|ref|NP_378317.1| - 1.3e-07 32.5 4.8 0.0029 18.5 0.4 2.5 2 0 0 2 2 2 2 4Fe-4S double cluster binding domain Fer4 PF00037.27 gi|15922648|ref|NP_378317.1| - 4.2e-07 29.5 17.4 0.0015 18.2 5.0 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|15922648|ref|NP_378317.1| - 1.4e-06 28.3 9.4 3.7e-05 23.8 10.9 2.2 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_6 PF12837.7 gi|15922648|ref|NP_378317.1| - 1.8e-06 27.8 15.8 0.0059 16.6 3.9 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|15922648|ref|NP_378317.1| - 3.1e-06 27.3 9.5 0.0059 17.0 1.5 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_18 PF13746.6 gi|15922648|ref|NP_378317.1| - 8.4e-06 26.0 4.8 0.021 15.0 0.4 2.4 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15922648|ref|NP_378317.1| - 1.1e-05 25.9 10.1 3.6e-05 24.2 10.1 1.9 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|15922648|ref|NP_378317.1| - 2.1e-05 25.0 10.0 0.00033 21.1 10.9 2.3 1 1 1 2 2 2 2 4Fe-4S dicluster domain Fer4_13 PF13370.6 gi|15922648|ref|NP_378317.1| - 2.5e-05 24.7 4.8 0.037 14.6 0.3 2.5 2 0 0 2 2 2 2 4Fe-4S single cluster domain of Ferredoxin I Fer4_3 PF12798.7 gi|15922648|ref|NP_378317.1| - 5.3e-05 23.9 20.6 0.021 15.7 5.7 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_2 PF12797.7 gi|15922648|ref|NP_378317.1| - 6.1e-05 22.9 13.9 0.0052 16.8 2.6 2.5 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_22 PF17179.4 gi|15922648|ref|NP_378317.1| - 0.022 15.6 5.2 1.4 9.9 0.5 2.4 2 0 0 2 2 2 0 4Fe-4S dicluster domain Fer4_15 PF13459.6 gi|15922648|ref|NP_378317.1| - 0.029 15.1 3.3 4.1 8.2 0.4 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain Fer4_21 PF14697.6 gi|15922648|ref|NP_378317.1| - 0.061 13.5 12.5 0.24 11.6 12.5 1.9 1 1 0 1 1 1 0 4Fe-4S dicluster domain DEAD PF00270.29 gi|15922649|ref|NP_378318.1| - 4.9e-24 85.0 0.0 2.2e-23 82.9 0.0 2.0 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|15922649|ref|NP_378318.1| - 3.6e-21 75.6 0.0 4.4e-17 62.4 0.0 3.0 3 0 0 3 3 3 2 Helicase conserved C-terminal domain DUF1998 PF09369.10 gi|15922649|ref|NP_378318.1| - 1.5e-11 44.9 0.1 7.1e-11 42.7 0.1 2.2 2 0 0 2 2 2 1 Domain of unknown function (DUF1998) ResIII PF04851.15 gi|15922649|ref|NP_378318.1| - 8.3e-09 35.7 0.0 3.3e-08 33.7 0.0 1.9 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit SecA_DEAD PF07517.14 gi|15922649|ref|NP_378318.1| - 0.00014 21.3 0.0 0.00028 20.3 0.0 1.4 1 0 0 1 1 1 1 SecA DEAD-like domain AAA_19 PF13245.6 gi|15922649|ref|NP_378318.1| - 0.053 13.8 0.0 0.14 12.5 0.0 1.7 1 0 0 1 1 1 0 AAA domain T2SSE PF00437.20 gi|15922649|ref|NP_378318.1| - 0.17 10.9 0.0 0.3 10.1 0.0 1.3 1 0 0 1 1 1 0 Type II/IV secretion system protein QueC PF06508.13 gi|15922650|ref|NP_378319.1| - 3.6e-62 209.6 0.0 5e-62 209.1 0.0 1.2 1 0 0 1 1 1 1 Queuosine biosynthesis protein QueC GATase_7 PF13537.6 gi|15922650|ref|NP_378319.1| - 1.7e-16 60.3 0.0 3.2e-16 59.4 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_6 PF13522.6 gi|15922650|ref|NP_378319.1| - 3.4e-10 40.3 0.0 5.9e-10 39.5 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain ThiI PF02568.14 gi|15922650|ref|NP_378319.1| - 1.3e-09 37.9 0.0 1.1e-08 34.9 0.0 2.4 1 1 0 1 1 1 1 Thiamine biosynthesis protein (ThiI) tRNA_Me_trans PF03054.16 gi|15922650|ref|NP_378319.1| - 6.6e-07 28.4 0.0 7.2e-06 25.0 0.0 2.5 3 0 0 3 3 3 1 tRNA methyl transferase ATP_bind_3 PF01171.20 gi|15922650|ref|NP_378319.1| - 0.0023 17.7 0.0 0.0038 17.0 0.0 1.3 1 0 0 1 1 1 1 PP-loop family Asn_synthase PF00733.21 gi|15922650|ref|NP_378319.1| - 0.012 15.3 0.0 0.019 14.7 0.0 1.2 1 0 0 1 1 1 0 Asparagine synthase NAD_synthase PF02540.17 gi|15922650|ref|NP_378319.1| - 0.065 12.4 0.0 0.52 9.4 0.0 2.1 2 0 0 2 2 2 0 NAD synthase Thioredoxin_6 PF13848.6 gi|15922650|ref|NP_378319.1| - 0.53 10.2 3.1 1.2 9.0 0.1 2.7 3 1 0 3 3 3 0 Thioredoxin-like domain PCI PF01399.27 gi|15922651|ref|NP_378320.1| - 0.003 18.0 0.3 0.0034 17.9 0.3 1.1 1 0 0 1 1 1 1 PCI domain DUF2582 PF10771.9 gi|15922651|ref|NP_378320.1| - 0.0052 16.9 0.0 0.0069 16.5 0.0 1.1 1 0 0 1 1 1 1 Winged helix-turn-helix domain (DUF2582) TFIIE_beta PF02186.15 gi|15922651|ref|NP_378320.1| - 0.0064 16.7 0.1 0.0072 16.6 0.1 1.1 1 0 0 1 1 1 1 TFIIE beta subunit core domain Rio2_N PF09202.11 gi|15922651|ref|NP_378320.1| - 0.013 15.7 0.0 0.013 15.7 0.0 1.1 1 0 0 1 1 1 0 Rio2, N-terminal z-alpha PF02295.17 gi|15922651|ref|NP_378320.1| - 0.014 15.4 0.1 0.017 15.1 0.1 1.1 1 0 0 1 1 1 0 Adenosine deaminase z-alpha domain DUF977 PF06163.11 gi|15922651|ref|NP_378320.1| - 0.015 15.2 0.0 0.016 15.1 0.0 1.0 1 0 0 1 1 1 0 Bacterial protein of unknown function (DUF977) TrmB PF01978.19 gi|15922651|ref|NP_378320.1| - 0.033 14.1 0.1 0.041 13.8 0.1 1.2 1 0 0 1 1 1 0 Sugar-specific transcriptional regulator TrmB Phage_rep_O PF04492.13 gi|15922651|ref|NP_378320.1| - 0.034 14.7 0.0 0.041 14.5 0.0 1.2 1 0 0 1 1 1 0 Bacteriophage replication protein O DUF5090 PF17009.5 gi|15922652|ref|NP_378321.1| - 2.3 8.2 8.3 2.6 7.9 8.3 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5090) Herpes_LMP1 PF05297.11 gi|15922652|ref|NP_378321.1| - 7.9 5.6 9.3 11 5.1 9.3 1.2 1 0 0 1 1 1 0 Herpesvirus latent membrane protein 1 (LMP1) AAA_assoc_C PF09821.9 gi|15922653|ref|NP_378322.1| - 6.5e-29 100.9 0.2 3.7e-28 98.5 0.1 1.8 2 0 0 2 2 2 1 C-terminal AAA-associated domain VIT1 PF01988.19 gi|15922654|ref|NP_378323.1| - 1.1e-47 162.7 0.1 1.3e-47 162.5 0.1 1.0 1 0 0 1 1 1 1 VIT family SelB-wing_2 PF09106.11 gi|15922654|ref|NP_378323.1| - 0.067 13.4 0.1 0.12 12.6 0.1 1.4 1 0 0 1 1 1 0 Elongation factor SelB, winged helix DUF2207 PF09972.9 gi|15922654|ref|NP_378323.1| - 0.091 11.5 1.2 0.11 11.3 0.2 1.5 1 1 1 2 2 2 0 Predicted membrane protein (DUF2207) SLATT_1 PF18181.1 gi|15922654|ref|NP_378323.1| - 0.14 12.1 0.2 0.52 10.2 0.0 2.0 2 1 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 1 Lactamase_B PF00753.27 gi|15922655|ref|NP_378324.1| - 2.3e-09 37.5 0.5 1.3e-07 31.8 0.4 2.3 2 0 0 2 2 2 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.6 gi|15922655|ref|NP_378324.1| - 1.9e-06 27.9 0.0 3e-06 27.2 0.0 1.3 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_2 PF12706.7 gi|15922655|ref|NP_378324.1| - 3.4e-05 23.5 0.0 6.9e-05 22.5 0.0 1.6 1 0 0 1 1 1 1 Beta-lactamase superfamily domain HTH_Tnp_1 PF01527.20 gi|15922655|ref|NP_378324.1| - 0.057 13.7 0.0 0.76 10.1 0.0 2.4 2 0 0 2 2 2 0 Transposase Peptidase_M24 PF00557.24 gi|15922656|ref|NP_378325.1| - 8.4e-64 215.1 0.1 1.2e-63 214.6 0.1 1.2 1 0 0 1 1 1 1 Metallopeptidase family M24 Creatinase_N PF01321.18 gi|15922656|ref|NP_378325.1| - 3e-16 60.3 0.0 5.2e-16 59.5 0.0 1.4 1 0 0 1 1 1 1 Creatinase/Prolidase N-terminal domain Nuc_deoxyri_tr3 PF11071.8 gi|15922656|ref|NP_378325.1| - 0.0048 17.0 0.0 0.01 15.9 0.0 1.5 1 0 0 1 1 1 1 Nucleoside 2-deoxyribosyltransferase YtoQ Methyltransf_3 PF01596.17 gi|15922656|ref|NP_378325.1| - 0.023 13.9 0.3 0.075 12.2 0.1 1.9 2 0 0 2 2 2 0 O-methyltransferase Hist_deacetyl PF00850.19 gi|15922657|ref|NP_378326.1| - 2.8e-57 194.5 0.0 4.2e-57 194.0 0.0 1.1 1 0 0 1 1 1 1 Histone deacetylase domain OrfB_Zn_ribbon PF07282.11 gi|15922658|ref|NP_378327.1| - 2.7e-21 75.2 0.0 4.6e-21 74.5 0.0 1.4 1 0 0 1 1 1 1 Putative transposase DNA-binding domain Rubredoxin_2 PF18073.1 gi|15922658|ref|NP_378327.1| - 0.032 13.9 2.3 0.28 10.9 2.6 2.1 1 1 1 2 2 2 0 Rubredoxin metal binding domain OrfB_IS605 PF01385.19 gi|15922658|ref|NP_378327.1| - 0.15 12.2 0.0 0.25 11.6 0.0 1.4 1 0 0 1 1 1 0 Probable transposase zf-ribbon_3 PF13248.6 gi|15922658|ref|NP_378327.1| - 0.25 10.8 2.5 13 5.3 0.1 2.4 2 0 0 2 2 2 0 zinc-ribbon domain zinc_ribbon_2 PF13240.6 gi|15922658|ref|NP_378327.1| - 0.26 11.1 4.2 3 7.7 0.5 2.4 2 0 0 2 2 2 0 zinc-ribbon domain GATase_4 PF13230.6 gi|15922659|ref|NP_378328.1| - 4.3e-05 22.6 0.0 7.6e-05 21.7 0.0 1.4 1 1 0 1 1 1 1 Glutamine amidotransferases class-II GATase_6 PF13522.6 gi|15922659|ref|NP_378328.1| - 0.065 13.4 0.0 0.093 12.9 0.0 1.3 1 0 0 1 1 1 0 Glutamine amidotransferase domain Lactamase_B_2 PF12706.7 gi|15922660|ref|NP_378329.1| - 1.5e-15 57.2 0.0 2.1e-15 56.8 0.0 1.2 1 0 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B PF00753.27 gi|15922660|ref|NP_378329.1| - 2.2e-13 50.7 0.1 5e-13 49.5 0.1 1.5 1 1 0 1 1 1 1 Metallo-beta-lactamase superfamily Lactamase_B_3 PF13483.6 gi|15922660|ref|NP_378329.1| - 0.0022 17.9 0.2 0.0049 16.8 0.2 1.6 1 1 0 1 1 1 1 Beta-lactamase superfamily domain Lactamase_B_6 PF16661.5 gi|15922660|ref|NP_378329.1| - 0.0025 17.3 0.1 0.94 8.9 0.0 2.4 1 1 1 2 2 2 2 Metallo-beta-lactamase superfamily domain PDCD9 PF07147.12 gi|15922660|ref|NP_378329.1| - 0.013 14.7 0.0 0.018 14.3 0.0 1.1 1 0 0 1 1 1 0 Mitochondrial 28S ribosomal protein S30 (PDCD9) DUF5613 PF18467.1 gi|15922660|ref|NP_378329.1| - 0.033 14.6 0.0 0.07 13.5 0.0 1.5 1 0 0 1 1 1 0 Domain of unknown function (DUF5613) PfkB PF00294.24 gi|15922661|ref|NP_378330.1| - 1.3e-57 195.4 0.5 1.7e-57 195.0 0.5 1.1 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Phos_pyr_kin PF08543.12 gi|15922661|ref|NP_378330.1| - 2.4e-09 37.0 0.0 3.4e-09 36.5 0.0 1.3 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase Carb_kinase PF01256.17 gi|15922661|ref|NP_378330.1| - 0.0016 18.0 0.0 0.0031 17.0 0.0 1.4 1 0 0 1 1 1 1 Carbohydrate kinase Phos_pyr_kin PF08543.12 gi|15922662|ref|NP_378331.1| - 2.1e-80 269.7 0.4 2.6e-80 269.4 0.4 1.1 1 0 0 1 1 1 1 Phosphomethylpyrimidine kinase PfkB PF00294.24 gi|15922662|ref|NP_378331.1| - 4.4e-16 59.0 0.1 6.7e-16 58.5 0.1 1.3 1 0 0 1 1 1 1 pfkB family carbohydrate kinase Carb_kinase PF01256.17 gi|15922662|ref|NP_378331.1| - 5.8e-09 35.8 0.2 8.6e-09 35.2 0.2 1.3 1 0 0 1 1 1 1 Carbohydrate kinase ThiP_synth PF10120.9 gi|15922662|ref|NP_378331.1| - 0.046 13.3 0.1 0.15 11.6 0.0 1.9 2 1 0 2 2 2 0 Thiamine-phosphate synthase FlbD PF06289.11 gi|15922662|ref|NP_378331.1| - 0.046 13.3 0.1 0.21 11.2 0.0 2.2 2 0 0 2 2 2 0 Flagellar and Swarming motility proteins PS_pyruv_trans PF04230.13 gi|15922662|ref|NP_378331.1| - 0.065 13.1 0.8 1.9 8.4 0.5 2.2 2 0 0 2 2 2 0 Polysaccharide pyruvyl transferase CorC_HlyC PF03471.17 gi|15922662|ref|NP_378331.1| - 0.1 12.6 0.0 0.22 11.5 0.0 1.6 1 0 0 1 1 1 0 Transporter associated domain CelTOS PF18659.1 gi|15922662|ref|NP_378331.1| - 2.5 8.6 8.7 2.4 8.6 0.7 2.5 2 1 0 2 2 2 0 Cell-traversal protein for ookinetes and sporozoites PDDEXK_1 PF12705.7 gi|15922663|ref|NP_378332.1| - 6e-13 49.3 0.3 2e-10 41.0 0.5 2.4 1 1 1 2 2 2 2 PD-(D/E)XK nuclease superfamily Cas_Cas4 PF01930.17 gi|15922663|ref|NP_378332.1| - 2.7e-09 37.3 0.2 3.5e-09 37.0 0.2 1.2 1 0 0 1 1 1 1 Domain of unknown function DUF83 PDDEXK_3 PF13366.6 gi|15922663|ref|NP_378332.1| - 4.7e-08 33.4 0.5 8.6e-08 32.6 0.5 1.5 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily AHJR-like PF18743.1 gi|15922663|ref|NP_378332.1| - 0.094 12.3 0.1 0.19 11.3 0.1 1.4 1 0 0 1 1 1 0 REase_AHJR-like Glyco_tranf_2_3 PF13641.6 gi|15922664|ref|NP_378333.1| - 2.3e-39 135.6 0.0 3e-39 135.3 0.0 1.1 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_trans_2_3 PF13632.6 gi|15922664|ref|NP_378333.1| - 1.2e-30 106.9 0.4 1.7e-30 106.4 0.4 1.2 1 0 0 1 1 1 1 Glycosyl transferase family group 2 Glycos_transf_2 PF00535.26 gi|15922664|ref|NP_378333.1| - 1.5e-27 96.5 0.1 2.2e-27 95.9 0.1 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_transf_21 PF13506.6 gi|15922664|ref|NP_378333.1| - 6.6e-14 51.8 0.0 1.6e-13 50.5 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferase family 21 Glyco_tranf_2_2 PF10111.9 gi|15922664|ref|NP_378333.1| - 2.1e-07 30.7 0.1 2.4e-06 27.2 0.1 2.0 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Cellulose_synt PF03552.14 gi|15922664|ref|NP_378333.1| - 0.00021 19.9 5.0 0.00031 19.4 5.0 1.2 1 0 0 1 1 1 1 Cellulose synthase Glyco_tranf_2_4 PF13704.6 gi|15922664|ref|NP_378333.1| - 0.00043 20.7 0.0 0.00078 19.9 0.0 1.4 1 0 0 1 1 1 1 Glycosyl transferase family 2 GNT-I PF03071.15 gi|15922664|ref|NP_378333.1| - 0.0027 16.5 0.1 0.004 16.0 0.1 1.1 1 0 0 1 1 1 1 GNT-I family Chitin_synth_2 PF03142.15 gi|15922664|ref|NP_378333.1| - 0.17 10.5 7.4 12 4.4 0.0 3.3 2 1 0 3 3 3 0 Chitin synthase Aminotran_1_2 PF00155.21 gi|15922665|ref|NP_378334.1| - 3e-25 89.2 0.0 3.4e-25 89.0 0.0 1.0 1 0 0 1 1 1 1 Aminotransferase class I and II Aminotran_MocR PF12897.7 gi|15922665|ref|NP_378334.1| - 1.2e-07 31.0 0.0 1.7e-07 30.4 0.0 1.2 1 0 0 1 1 1 1 Alanine-glyoxylate amino-transferase OCD_Mu_crystall PF02423.15 gi|15922666|ref|NP_378335.1| - 1e-47 162.7 0.0 1.4e-47 162.2 0.0 1.1 1 0 0 1 1 1 1 Ornithine cyclodeaminase/mu-crystallin family Shikimate_DH PF01488.20 gi|15922666|ref|NP_378335.1| - 0.00033 20.7 0.1 0.00059 19.9 0.1 1.4 1 0 0 1 1 1 1 Shikimate / quinate 5-dehydrogenase BofC_C PF08955.10 gi|15922666|ref|NP_378335.1| - 0.034 14.2 0.2 0.17 11.9 0.1 2.2 2 0 0 2 2 2 0 BofC C-terminal domain IlvN PF07991.12 gi|15922666|ref|NP_378335.1| - 0.046 13.3 0.1 0.086 12.4 0.1 1.4 1 0 0 1 1 1 0 Acetohydroxy acid isomeroreductase, NADPH-binding domain NAD_binding_7 PF13241.6 gi|15922666|ref|NP_378335.1| - 0.065 13.7 0.1 0.13 12.7 0.1 1.4 1 0 0 1 1 1 0 Putative NAD(P)-binding NAD_binding_2 PF03446.15 gi|15922666|ref|NP_378335.1| - 0.072 13.3 0.0 0.12 12.5 0.0 1.5 1 1 0 1 1 1 0 NAD binding domain of 6-phosphogluconate dehydrogenase GFO_IDH_MocA PF01408.22 gi|15922666|ref|NP_378335.1| - 0.098 13.5 0.0 0.19 12.6 0.0 1.4 1 0 0 1 1 1 0 Oxidoreductase family, NAD-binding Rossmann fold HTH_11 PF08279.12 gi|15922667|ref|NP_378336.1| - 5.4e-07 29.5 4.4 7.9e-05 22.5 0.2 2.8 1 1 1 2 2 2 2 HTH domain HTH_24 PF13412.6 gi|15922667|ref|NP_378336.1| - 1.2e-05 24.8 0.2 2.2e-05 23.9 0.2 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding MarR PF01047.22 gi|15922667|ref|NP_378336.1| - 0.00019 21.3 0.2 0.0007 19.5 0.0 1.8 2 0 0 2 2 2 1 MarR family HTH_DeoR PF08220.12 gi|15922667|ref|NP_378336.1| - 0.00083 19.1 0.0 0.0018 18.0 0.0 1.5 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain Bacillus_HBL PF05791.11 gi|15922667|ref|NP_378336.1| - 0.0015 18.4 1.2 0.0019 18.1 1.2 1.1 1 0 0 1 1 1 1 Bacillus haemolytic enterotoxin (HBL) HTH_Mga PF08280.11 gi|15922667|ref|NP_378336.1| - 0.0023 17.9 1.1 0.003 17.6 0.1 1.7 2 0 0 2 2 2 1 M protein trans-acting positive regulator (MGA) HTH domain HTH_5 PF01022.20 gi|15922667|ref|NP_378336.1| - 0.0054 16.6 0.1 0.018 14.9 0.0 1.8 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family FeoC PF09012.10 gi|15922667|ref|NP_378336.1| - 0.0065 16.5 0.1 0.016 15.2 0.0 1.7 1 1 1 2 2 2 1 FeoC like transcriptional regulator Fe_dep_repress PF01325.19 gi|15922667|ref|NP_378336.1| - 0.0084 16.3 0.1 0.032 14.4 0.0 1.9 2 1 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain HR1 PF02185.16 gi|15922667|ref|NP_378336.1| - 0.013 15.6 1.8 0.025 14.7 1.8 1.6 1 0 0 1 1 1 0 Hr1 repeat DUF1192 PF06698.11 gi|15922667|ref|NP_378336.1| - 0.019 15.0 6.0 0.14 12.2 1.4 3.0 1 1 2 3 3 3 0 Protein of unknown function (DUF1192) F-112 PF09645.10 gi|15922667|ref|NP_378336.1| - 0.024 14.8 0.6 0.53 10.4 0.1 2.1 1 1 1 2 2 2 0 F-112 protein Csm1_N PF18504.1 gi|15922667|ref|NP_378336.1| - 0.029 14.7 2.0 0.029 14.7 2.0 1.6 2 0 0 2 2 1 0 Csm1 N-terminal domain FlaC_arch PF05377.11 gi|15922667|ref|NP_378336.1| - 0.031 14.7 1.5 0.074 13.5 1.5 1.6 1 0 0 1 1 1 0 Flagella accessory protein C (FlaC) HTH_IclR PF09339.10 gi|15922667|ref|NP_378336.1| - 0.037 13.8 0.0 0.056 13.3 0.0 1.3 1 0 0 1 1 1 0 IclR helix-turn-helix domain HTH_26 PF13443.6 gi|15922667|ref|NP_378336.1| - 0.045 14.2 0.6 8.4 6.9 0.0 2.3 2 0 0 2 2 2 0 Cro/C1-type HTH DNA-binding domain Spc7 PF08317.11 gi|15922667|ref|NP_378336.1| - 0.061 12.2 5.8 0.064 12.1 5.8 1.0 1 0 0 1 1 1 0 Spc7 kinetochore protein MarR_2 PF12802.7 gi|15922667|ref|NP_378336.1| - 0.091 12.7 0.0 0.14 12.1 0.0 1.3 1 0 0 1 1 1 0 MarR family Rrf2 PF02082.20 gi|15922667|ref|NP_378336.1| - 0.092 13.1 0.2 0.42 11.0 0.0 2.0 2 1 0 2 2 2 0 Transcriptional regulator Med9 PF07544.13 gi|15922667|ref|NP_378336.1| - 0.24 11.5 6.1 1 9.5 2.3 2.2 2 1 0 2 2 2 0 RNA polymerase II transcription mediator complex subunit 9 DUF5320 PF17253.2 gi|15922667|ref|NP_378336.1| - 0.43 11.7 2.1 0.63 11.1 2.1 1.5 1 1 0 1 1 1 0 Family of unknown function (DUF5320) DUF5595 PF18077.1 gi|15922667|ref|NP_378336.1| - 0.75 9.9 5.3 0.19 11.8 2.1 1.7 2 0 0 2 2 2 0 Domain of unknown function (DUF5595) DivIC PF04977.15 gi|15922667|ref|NP_378336.1| - 1.1 9.1 6.7 0.37 10.6 3.0 2.0 1 1 1 2 2 2 0 Septum formation initiator Glycos_transf_2 PF00535.26 gi|15922668|ref|NP_378337.1| - 2.3e-26 92.6 0.0 3.2e-26 92.1 0.0 1.1 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|15922668|ref|NP_378337.1| - 0.0002 21.3 0.0 0.00024 21.0 0.0 1.2 1 0 0 1 1 1 1 Glycosyltransferase like family 2 Glyco_tranf_2_4 PF13704.6 gi|15922668|ref|NP_378337.1| - 0.0021 18.6 0.0 0.0044 17.5 0.0 1.6 1 0 0 1 1 1 1 Glycosyl transferase family 2 DUF1947 PF09183.10 gi|15922669|ref|NP_378338.1| - 3.7e-24 84.8 2.3 7.9e-24 83.7 2.3 1.6 1 0 0 1 1 1 1 Domain of unknown function (DUF1947) PUA PF01472.20 gi|15922669|ref|NP_378338.1| - 1.4e-14 53.8 0.2 2e-14 53.3 0.2 1.3 1 0 0 1 1 1 1 PUA domain UPF0113 PF03657.13 gi|15922669|ref|NP_378338.1| - 0.001 19.3 0.2 0.0016 18.6 0.2 1.3 1 0 0 1 1 1 1 UPF0113 PUA domain Pre-PUA PF17832.1 gi|15922669|ref|NP_378338.1| - 0.14 12.8 0.6 3.5 8.4 0.6 2.4 1 1 0 1 1 1 0 Pre-PUA-like domain Ald_Xan_dh_C2 PF02738.18 gi|15922670|ref|NP_378339.1| - 1.1e-151 506.1 0.0 1.2e-151 505.9 0.0 1.1 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 gi|15922670|ref|NP_378339.1| - 1.5e-18 67.1 0.1 2.3e-16 60.1 0.1 2.6 1 1 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Peptidase_M48 PF01435.18 gi|15922671|ref|NP_378340.1| - 8.6e-17 61.5 3.1 5.3e-15 55.7 3.1 2.7 1 1 0 1 1 1 1 Peptidase family M48 DUF4157 PF13699.6 gi|15922671|ref|NP_378340.1| - 0.00066 19.9 0.0 0.00099 19.3 0.0 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4157) Peptidase_M56 PF05569.11 gi|15922671|ref|NP_378340.1| - 0.02 14.1 0.5 0.066 12.4 0.5 1.8 1 1 0 1 1 1 0 BlaR1 peptidase M56 Peptidase_M78 PF06114.13 gi|15922671|ref|NP_378340.1| - 0.043 13.8 0.8 0.095 12.6 0.7 1.7 1 1 0 1 1 1 0 IrrE N-terminal-like domain DUF2201_N PF13203.6 gi|15922671|ref|NP_378340.1| - 0.16 11.5 0.0 0.2 11.2 0.0 1.1 1 0 0 1 1 1 0 Putative metallopeptidase domain ADH_N PF08240.12 gi|15922672|ref|NP_378341.1| - 1.1e-25 89.6 0.6 1.1e-25 89.6 0.6 1.7 2 0 0 2 2 2 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|15922672|ref|NP_378341.1| - 5e-25 88.0 0.0 8.3e-25 87.3 0.0 1.3 1 0 0 1 1 1 1 Zinc-binding dehydrogenase Glu_dehyd_C PF16912.5 gi|15922672|ref|NP_378341.1| - 7.1e-17 61.6 0.2 1e-16 61.1 0.2 1.1 1 0 0 1 1 1 1 Glucose dehydrogenase C-terminus ADH_zinc_N_2 PF13602.6 gi|15922672|ref|NP_378341.1| - 3.9e-05 24.7 0.0 8.1e-05 23.7 0.0 1.6 1 0 0 1 1 1 1 Zinc-binding dehydrogenase AlaDh_PNT_C PF01262.21 gi|15922672|ref|NP_378341.1| - 0.038 13.3 0.4 0.066 12.5 0.4 1.4 1 0 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Fer4_17 PF13534.6 gi|15922672|ref|NP_378341.1| - 0.049 14.2 1.6 0.058 13.9 0.3 1.8 2 0 0 2 2 2 0 4Fe-4S dicluster domain Shikimate_DH PF01488.20 gi|15922672|ref|NP_378341.1| - 0.1 12.6 0.0 0.23 11.5 0.0 1.5 1 0 0 1 1 1 0 Shikimate / quinate 5-dehydrogenase CobD_Cbib PF03186.13 gi|15922673|ref|NP_378342.1| - 5.5e-58 196.4 0.0 7.8e-58 195.9 0.0 1.1 1 0 0 1 1 1 1 CobD/Cbib protein DUF3708 PF12501.8 gi|15922673|ref|NP_378342.1| - 0.13 12.1 0.4 0.3 10.8 0.1 1.8 2 0 0 2 2 2 0 Phosphate ATP-binding cassette transporter CobS PF02654.15 gi|15922674|ref|NP_378343.1| - 3.9e-29 102.3 8.8 4.5e-29 102.1 8.8 1.0 1 0 0 1 1 1 1 Cobalamin-5-phosphate synthase GATase_3 PF07685.14 gi|15922675|ref|NP_378344.1| - 7.4e-35 120.3 0.0 1.1e-34 119.8 0.0 1.2 1 0 0 1 1 1 1 CobB/CobQ-like glutamine amidotransferase domain AAA_26 PF13500.6 gi|15922675|ref|NP_378344.1| - 7.3e-12 45.5 0.0 1.4e-10 41.4 0.0 2.2 1 1 0 1 1 1 1 AAA domain CbiA PF01656.23 gi|15922675|ref|NP_378344.1| - 2.2e-11 43.9 0.0 7e-11 42.3 0.0 1.8 2 0 0 2 2 2 1 CobQ/CobB/MinD/ParA nucleotide binding domain SNO PF01174.19 gi|15922675|ref|NP_378344.1| - 0.00019 21.3 0.0 0.00047 20.1 0.0 1.6 2 0 0 2 2 2 1 SNO glutamine amidotransferase family GATase PF00117.28 gi|15922675|ref|NP_378344.1| - 0.00024 21.0 0.0 0.00037 20.3 0.0 1.3 1 0 0 1 1 1 1 Glutamine amidotransferase class-I Peptidase_C26 PF07722.13 gi|15922675|ref|NP_378344.1| - 0.02 14.7 0.0 0.36 10.6 0.2 2.6 2 1 1 3 3 3 0 Peptidase C26 GMP_synt_C PF00958.22 gi|15922676|ref|NP_378345.1| - 5.6e-20 71.2 5.0 1.4e-17 63.5 1.0 3.8 1 1 2 3 3 3 2 GMP synthase C terminal domain NAD_synthase PF02540.17 gi|15922676|ref|NP_378345.1| - 2.2e-12 46.6 0.1 2.1e-11 43.4 0.1 2.2 1 1 0 1 1 1 1 NAD synthase ATP_bind_3 PF01171.20 gi|15922676|ref|NP_378345.1| - 1e-07 31.9 0.0 1.7e-07 31.2 0.0 1.3 1 0 0 1 1 1 1 PP-loop family QueC PF06508.13 gi|15922676|ref|NP_378345.1| - 9.1e-06 25.3 0.0 0.0088 15.6 0.0 2.3 1 1 0 2 2 2 2 Queuosine biosynthesis protein QueC tRNA_Me_trans PF03054.16 gi|15922676|ref|NP_378345.1| - 0.0032 16.3 0.0 0.61 8.8 0.0 2.3 2 0 0 2 2 2 2 tRNA methyl transferase ThiI PF02568.14 gi|15922676|ref|NP_378345.1| - 0.0044 16.6 0.2 0.047 13.3 0.0 2.6 2 2 0 2 2 2 1 Thiamine biosynthesis protein (ThiI) CBS PF00571.28 gi|15922676|ref|NP_378345.1| - 0.042 14.3 0.0 0.23 11.9 0.0 2.3 1 0 0 1 1 1 0 CBS domain DnaB_2 PF07261.11 gi|15922676|ref|NP_378345.1| - 0.051 13.3 0.8 0.98 9.2 0.3 2.7 2 0 0 2 2 2 0 Replication initiation and membrane attachment G6PD_C PF02781.16 gi|15922676|ref|NP_378345.1| - 0.053 12.7 0.2 1.5 7.9 0.0 2.3 2 0 0 2 2 2 0 Glucose-6-phosphate dehydrogenase, C-terminal domain Peptidase_M48 PF01435.18 gi|15922677|ref|NP_378346.1| - 1e-24 87.4 0.0 1.7e-24 86.7 0.0 1.3 1 0 0 1 1 1 1 Peptidase family M48 Peptidase_M56 PF05569.11 gi|15922677|ref|NP_378346.1| - 0.11 11.7 0.0 0.11 11.7 0.0 2.0 3 0 0 3 3 3 0 BlaR1 peptidase M56 CBS PF00571.28 gi|15922679|ref|NP_378348.1| - 2.9e-31 107.7 3.2 3.6e-15 56.1 0.1 2.0 2 0 0 2 2 2 2 CBS domain IF3_N PF05198.16 gi|15922679|ref|NP_378348.1| - 0.035 14.4 0.4 1.5 9.1 0.0 2.4 2 1 0 2 2 2 0 Translation initiation factor IF-3, N-terminal domain DeoC PF01791.9 gi|15922681|ref|NP_378350.1| - 6.2e-36 124.2 0.0 7.2e-36 124.0 0.0 1.0 1 0 0 1 1 1 1 DeoC/LacD family aldolase ThiG PF05690.14 gi|15922681|ref|NP_378350.1| - 0.058 12.7 0.1 0.38 10.0 0.0 2.3 3 0 0 3 3 3 0 Thiazole biosynthesis protein ThiG Enterotoxin_a PF01375.17 gi|15922681|ref|NP_378350.1| - 0.065 12.8 0.0 0.089 12.4 0.0 1.1 1 0 0 1 1 1 0 Heat-labile enterotoxin alpha chain DICT PF10069.9 gi|15922681|ref|NP_378350.1| - 0.18 11.5 0.0 0.29 10.9 0.0 1.3 1 0 0 1 1 1 0 Sensory domain in DIguanylate Cyclases and Two-component system PMT_2 PF13231.6 gi|15922682|ref|NP_378351.1| - 4.3e-12 46.5 11.9 4.3e-12 46.5 11.9 3.2 3 0 0 3 3 3 2 Dolichyl-phosphate-mannose-protein mannosyltransferase NTP_transferase PF00483.23 gi|15922683|ref|NP_378352.1| - 2.1e-28 99.6 0.0 2.4e-28 99.4 0.0 1.0 1 0 0 1 1 1 1 Nucleotidyl transferase NTP_transf_3 PF12804.7 gi|15922683|ref|NP_378352.1| - 5.6e-10 39.8 0.0 7.2e-10 39.4 0.0 1.3 1 1 0 1 1 1 1 MobA-like NTP transferase domain TPP_enzyme_N PF02776.18 gi|15922683|ref|NP_378352.1| - 0.067 12.8 0.0 0.1 12.2 0.0 1.2 1 0 0 1 1 1 0 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Epimerase PF01370.21 gi|15922684|ref|NP_378353.1| - 6.4e-25 88.0 0.0 1.1e-24 87.2 0.0 1.3 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family GDP_Man_Dehyd PF16363.5 gi|15922684|ref|NP_378353.1| - 1.1e-21 77.6 0.0 2.9e-21 76.2 0.0 1.8 1 1 0 1 1 1 1 GDP-mannose 4,6 dehydratase Polysacc_synt_2 PF02719.15 gi|15922684|ref|NP_378353.1| - 2.8e-05 23.4 0.1 0.00011 21.4 0.1 1.8 2 0 0 2 2 2 1 Polysaccharide biosynthesis protein RmlD_sub_bind PF04321.17 gi|15922684|ref|NP_378353.1| - 5.1e-05 22.5 0.0 0.0001 21.5 0.0 1.5 1 0 0 1 1 1 1 RmlD substrate binding domain UDPG_MGDP_dh_N PF03721.14 gi|15922684|ref|NP_378353.1| - 0.00018 21.1 0.0 0.00035 20.2 0.0 1.4 1 0 0 1 1 1 1 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain Glyco_transf_4 PF13439.6 gi|15922684|ref|NP_378353.1| - 0.012 15.7 0.1 0.023 14.7 0.1 1.5 1 0 0 1 1 1 0 Glycosyltransferase Family 4 NAD_binding_2 PF03446.15 gi|15922684|ref|NP_378353.1| - 0.21 11.8 0.0 0.56 10.4 0.0 1.7 1 1 1 2 2 2 0 NAD binding domain of 6-phosphogluconate dehydrogenase BcrAD_BadFG PF01869.20 gi|15922685|ref|NP_378354.1| - 6.1e-41 140.7 0.3 1.1e-40 139.9 0.3 1.4 1 1 0 1 1 1 1 BadF/BadG/BcrA/BcrD ATPase family ROK PF00480.20 gi|15922685|ref|NP_378354.1| - 1.7e-05 24.5 0.3 0.038 13.5 0.1 2.3 2 0 0 2 2 2 2 ROK family FGGY_N PF00370.21 gi|15922685|ref|NP_378354.1| - 0.047 13.2 0.0 0.082 12.5 0.0 1.4 1 0 0 1 1 1 0 FGGY family of carbohydrate kinases, N-terminal domain G_glu_transpept PF01019.21 gi|15922686|ref|NP_378355.1| - 7.8e-80 269.1 0.0 1e-79 268.7 0.0 1.1 1 0 0 1 1 1 1 Gamma-glutamyltranspeptidase EMP24_GP25L PF01105.24 gi|15922687|ref|NP_378356.1| - 0.018 15.0 0.1 0.022 14.7 0.1 1.1 1 0 0 1 1 1 0 emp24/gp25L/p24 family/GOLD MazG PF03819.17 gi|15922688|ref|NP_378357.1| - 2.9e-12 46.6 0.4 3.5e-12 46.3 0.4 1.1 1 0 0 1 1 1 1 MazG nucleotide pyrophosphohydrolase domain MazG-like PF12643.7 gi|15922688|ref|NP_378357.1| - 8.7e-07 29.1 0.3 1.3e-06 28.5 0.3 1.3 1 0 0 1 1 1 1 MazG-like family PRA-PH PF01503.17 gi|15922688|ref|NP_378357.1| - 0.00021 21.6 0.5 0.00023 21.6 0.5 1.1 1 0 0 1 1 1 1 Phosphoribosyl-ATP pyrophosphohydrolase Helicase_RecD PF05127.14 gi|15922689|ref|NP_378358.1| - 1.1e-46 158.9 0.0 2e-46 158.1 0.0 1.4 1 0 0 1 1 1 1 Helicase GNAT_acetyltr_2 PF13718.6 gi|15922689|ref|NP_378358.1| - 1.4e-34 119.5 0.0 2.8e-26 92.3 0.0 2.2 1 1 1 2 2 2 2 GNAT acetyltransferase 2 DUF1726 PF08351.11 gi|15922689|ref|NP_378358.1| - 3.2e-26 91.1 0.1 4e-25 87.6 0.1 2.4 2 0 0 2 2 2 1 Domain of unknown function (DUF1726) AAA_30 PF13604.6 gi|15922689|ref|NP_378358.1| - 0.0003 20.6 0.0 0.0014 18.4 0.0 2.0 1 1 1 2 2 2 1 AAA domain Acetyltransf_1 PF00583.25 gi|15922689|ref|NP_378358.1| - 0.00059 20.1 0.0 0.0018 18.5 0.0 1.8 1 0 0 1 1 1 1 Acetyltransferase (GNAT) family Acetyltransf_7 PF13508.7 gi|15922689|ref|NP_378358.1| - 0.002 18.5 0.1 0.018 15.4 0.0 2.7 3 0 0 3 3 3 1 Acetyltransferase (GNAT) domain Acetyltransf_10 PF13673.7 gi|15922689|ref|NP_378358.1| - 0.04 13.9 0.0 0.11 12.4 0.0 1.8 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain AAA_22 PF13401.6 gi|15922689|ref|NP_378358.1| - 0.052 13.8 0.0 0.71 10.1 0.0 2.7 1 1 1 2 2 2 0 AAA domain DEAD PF00270.29 gi|15922689|ref|NP_378358.1| - 0.058 13.2 0.0 0.13 12.0 0.0 1.6 1 0 0 1 1 1 0 DEAD/DEAH box helicase Utp14 PF04615.13 gi|15922691|ref|NP_378360.1| - 0.077 11.6 0.2 0.091 11.3 0.2 1.0 1 0 0 1 1 1 0 Utp14 protein DUF1314 PF07013.11 gi|15922691|ref|NP_378360.1| - 0.13 12.1 0.0 0.15 11.9 0.0 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF1314) AA_permease_2 PF13520.6 gi|15922692|ref|NP_378361.1| - 1.3e-17 63.8 56.4 3.5e-17 62.4 56.7 1.5 1 1 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|15922692|ref|NP_378361.1| - 3.1e-10 39.2 48.2 1.1e-09 37.5 48.2 2.1 1 1 0 1 1 1 1 Amino acid permease ETRAMP PF09716.10 gi|15922692|ref|NP_378361.1| - 0.0083 16.2 0.2 12 6.0 0.0 4.0 4 1 0 4 4 4 1 Malarial early transcribed membrane protein (ETRAMP) MFS_1 PF07690.16 gi|15922693|ref|NP_378362.1| - 1.4e-35 122.9 64.8 8.4e-25 87.4 33.1 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_1_like PF12832.7 gi|15922693|ref|NP_378362.1| - 4.1e-05 22.6 22.9 0.0054 15.6 1.2 4.1 2 1 2 4 4 4 4 MFS_1 like family Pox_P21 PF05313.12 gi|15922693|ref|NP_378362.1| - 2.9 7.4 12.7 0.023 14.3 3.1 2.2 2 1 0 2 2 2 0 Poxvirus P21 membrane protein DUF3341 PF11821.8 gi|15922693|ref|NP_378362.1| - 5.3 6.7 7.1 0.86 9.2 0.6 2.8 2 1 1 3 3 3 0 Protein of unknown function (DUF3341) Usp PF00582.26 gi|15922694|ref|NP_378363.1| - 3.8e-30 105.3 0.2 4.2e-30 105.1 0.2 1.0 1 0 0 1 1 1 1 Universal stress protein family DUF2004 PF09406.10 gi|15922694|ref|NP_378363.1| - 0.032 14.5 0.3 0.04 14.2 0.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2004) PBECR3 PF18812.1 gi|15922694|ref|NP_378363.1| - 0.062 13.3 0.8 0.44 10.5 0.3 2.0 1 1 1 2 2 2 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3 NAD_binding_7 PF13241.6 gi|15922694|ref|NP_378363.1| - 0.092 13.2 0.1 0.14 12.6 0.1 1.3 1 0 0 1 1 1 0 Putative NAD(P)-binding Sugar_tr PF00083.24 gi|15922695|ref|NP_378364.1| - 6.5e-55 186.8 21.2 1.3e-54 185.8 21.2 1.4 1 1 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|15922695|ref|NP_378364.1| - 1.2e-33 116.6 38.0 2e-24 86.2 33.1 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily TMEM141 PF15110.6 gi|15922695|ref|NP_378364.1| - 0.012 16.2 0.4 1.5 9.4 0.1 2.8 2 0 0 2 2 2 0 TMEM141 protein family COX6C PF02937.15 gi|15922695|ref|NP_378364.1| - 0.065 13.4 0.0 0.21 11.7 0.0 1.8 1 0 0 1 1 1 0 Cytochrome c oxidase subunit VIc BT1 PF03092.16 gi|15922695|ref|NP_378364.1| - 0.44 8.7 11.9 0.74 8.0 1.7 3.2 2 1 1 3 3 3 0 BT1 family Pro-kuma_activ PF09286.11 gi|15922696|ref|NP_378365.1| - 3.8e-13 49.9 0.0 8.4e-13 48.8 0.0 1.5 1 0 0 1 1 1 1 Pro-kumamolisin, activation domain Peptidase_S8 PF00082.22 gi|15922696|ref|NP_378365.1| - 0.0039 16.5 0.7 0.015 14.5 0.0 2.2 2 1 0 2 2 2 1 Subtilase family MG2 PF01835.19 gi|15922696|ref|NP_378365.1| - 0.004 17.6 0.0 0.066 13.7 0.0 2.7 2 0 0 2 2 2 1 MG2 domain WD40_3 PF15911.5 gi|15922696|ref|NP_378365.1| - 0.079 13.0 0.7 9.4 6.3 0.0 3.3 3 0 0 3 3 3 0 WD domain, G-beta repeat PNGaseA PF12222.8 gi|15922697|ref|NP_378366.1| - 1.4e-30 106.6 3.0 9.9e-29 100.5 3.0 2.2 1 1 0 1 1 1 1 Peptide N-acetyl-beta-D-glucosaminyl asparaginase amidase A MR_MLE_C PF13378.6 gi|15922698|ref|NP_378367.1| - 1.1e-58 198.4 0.0 1.5e-58 198.0 0.0 1.2 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 gi|15922698|ref|NP_378367.1| - 8.2e-15 55.0 0.0 1.5e-14 54.2 0.0 1.4 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain YnfE PF17452.2 gi|15922698|ref|NP_378367.1| - 0.0066 16.7 0.1 3.5 8.0 0.0 2.5 2 0 0 2 2 2 2 Uncharacterized YnfE-like Metallophos PF00149.28 gi|15922699|ref|NP_378368.1| - 5.4e-27 95.6 2.5 6.6e-27 95.3 2.5 1.1 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase Metallophos_2 PF12850.7 gi|15922699|ref|NP_378368.1| - 2.4e-06 27.8 0.0 3.4e-06 27.3 0.0 1.2 1 0 0 1 1 1 1 Calcineurin-like phosphoesterase superfamily domain DUF3501 PF12007.8 gi|15922700|ref|NP_378369.1| - 1.4e-62 211.0 2.4 1.6e-62 210.8 2.4 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3501) CCG PF02754.16 gi|15922701|ref|NP_378370.1| - 3.1e-19 69.0 0.9 4.6e-11 42.8 0.0 2.9 3 0 0 3 3 3 2 Cysteine-rich domain Fer4_8 PF13183.6 gi|15922701|ref|NP_378370.1| - 0.00018 21.9 6.9 0.00049 20.5 6.9 1.8 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15922701|ref|NP_378370.1| - 0.00023 21.7 5.8 0.0006 20.4 5.8 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_9 PF13187.6 gi|15922701|ref|NP_378370.1| - 0.00049 20.2 5.5 0.0012 19.0 5.5 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_21 PF14697.6 gi|15922701|ref|NP_378370.1| - 0.0053 16.9 5.4 0.42 10.8 0.7 2.5 2 0 0 2 2 2 2 4Fe-4S dicluster domain Fer4_4 PF12800.7 gi|15922701|ref|NP_378370.1| - 0.0066 16.9 2.4 0.0066 16.9 2.4 2.5 2 0 0 2 2 2 1 4Fe-4S binding domain Fer4_10 PF13237.6 gi|15922701|ref|NP_378370.1| - 0.015 15.4 9.5 0.029 14.5 8.4 2.1 2 1 0 2 2 1 0 4Fe-4S dicluster domain Fer4_17 PF13534.6 gi|15922701|ref|NP_378370.1| - 0.02 15.4 10.6 0.14 12.7 10.7 2.3 1 1 0 1 1 1 0 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15922701|ref|NP_378370.1| - 0.029 15.3 4.9 0.55 11.2 0.6 2.5 2 0 0 2 2 2 0 4Fe-4S double cluster binding domain Fer4 PF00037.27 gi|15922701|ref|NP_378370.1| - 0.042 13.7 10.3 0.84 9.6 2.1 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain FaeA PF04703.12 gi|15922701|ref|NP_378370.1| - 0.075 13.4 0.0 0.15 12.4 0.0 1.4 1 0 0 1 1 1 0 FaeA-like protein Fer4_6 PF12837.7 gi|15922701|ref|NP_378370.1| - 0.75 10.0 12.8 2.1 8.6 1.3 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_13 PF13370.6 gi|15922701|ref|NP_378370.1| - 3.4 8.3 6.4 10 6.7 1.3 2.5 2 0 0 2 2 2 0 4Fe-4S single cluster domain of Ferredoxin I Fer4_2 PF12797.7 gi|15922701|ref|NP_378370.1| - 5.7 7.3 10.4 0.99 9.6 1.4 2.5 2 0 0 2 2 2 0 4Fe-4S binding domain Rubrerythrin PF02915.17 gi|15922702|ref|NP_378371.1| - 1.2e-27 97.0 0.2 1.8e-27 96.4 0.2 1.3 1 1 0 1 1 1 1 Rubrerythrin Ferritin PF00210.24 gi|15922702|ref|NP_378371.1| - 3.6e-10 39.9 0.1 1.2e-08 35.0 0.1 2.0 1 1 0 1 1 1 1 Ferritin-like domain COQ7 PF03232.13 gi|15922702|ref|NP_378371.1| - 0.014 15.2 0.2 0.21 11.4 0.0 2.0 2 0 0 2 2 2 0 Ubiquinone biosynthesis protein COQ7 FA_desaturase_2 PF03405.14 gi|15922702|ref|NP_378371.1| - 0.024 13.5 0.0 1.7 7.4 0.0 2.0 1 1 0 2 2 2 0 Fatty acid desaturase DUF892 PF05974.12 gi|15922702|ref|NP_378371.1| - 0.04 13.9 0.2 0.36 10.8 0.0 2.0 1 1 1 2 2 2 0 Domain of unknown function (DUF892) GST_C PF00043.25 gi|15922702|ref|NP_378371.1| - 0.076 13.2 0.0 0.28 11.4 0.0 1.9 2 0 0 2 2 2 0 Glutathione S-transferase, C-terminal domain CBS PF00571.28 gi|15922703|ref|NP_378372.1| - 2.3e-29 101.6 5.6 4.6e-15 55.8 0.8 2.0 2 0 0 2 2 2 2 CBS domain DUF1840 PF08895.11 gi|15922703|ref|NP_378372.1| - 0.033 14.5 0.3 1.5 9.2 0.1 2.1 2 0 0 2 2 2 0 Domain of unknown function (DUF1840) IF3_N PF05198.16 gi|15922703|ref|NP_378372.1| - 0.08 13.2 3.4 0.94 9.8 0.4 2.8 1 1 1 2 2 2 0 Translation initiation factor IF-3, N-terminal domain HTH_24 PF13412.6 gi|15922704|ref|NP_378373.1| - 3.5e-08 32.9 0.6 8.5e-08 31.6 0.6 1.7 1 1 0 1 1 1 1 Winged helix-turn-helix DNA-binding HTH_IclR PF09339.10 gi|15922704|ref|NP_378373.1| - 5.2e-07 29.4 0.0 9.2e-07 28.6 0.0 1.4 1 0 0 1 1 1 1 IclR helix-turn-helix domain HTH_AsnC-type PF13404.6 gi|15922704|ref|NP_378373.1| - 2.2e-06 27.4 0.3 3.7e-06 26.7 0.3 1.4 1 0 0 1 1 1 1 AsnC-type helix-turn-helix domain TrmB PF01978.19 gi|15922704|ref|NP_378373.1| - 5.6e-06 26.1 0.4 1.2e-05 25.1 0.4 1.5 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HTH_36 PF13730.6 gi|15922704|ref|NP_378373.1| - 3.2e-05 23.8 0.2 7.3e-05 22.7 0.2 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain MarR_2 PF12802.7 gi|15922704|ref|NP_378373.1| - 7e-05 22.6 0.0 0.00013 21.8 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_11 PF08279.12 gi|15922704|ref|NP_378373.1| - 0.00024 21.0 0.3 0.00045 20.1 0.3 1.4 1 0 0 1 1 1 1 HTH domain HTH_29 PF13551.6 gi|15922704|ref|NP_378373.1| - 0.00026 20.9 0.0 0.00045 20.2 0.0 1.4 1 0 0 1 1 1 1 Winged helix-turn helix HTH_7 PF02796.15 gi|15922704|ref|NP_378373.1| - 0.00033 20.7 0.1 0.00074 19.6 0.1 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain of resolvase HTH_5 PF01022.20 gi|15922704|ref|NP_378373.1| - 0.00065 19.5 0.1 0.0013 18.5 0.1 1.6 1 0 0 1 1 1 1 Bacterial regulatory protein, arsR family HTH_28 PF13518.6 gi|15922704|ref|NP_378373.1| - 0.0018 18.4 0.0 0.0034 17.5 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_20 PF12840.7 gi|15922704|ref|NP_378373.1| - 0.0018 18.3 0.0 0.0036 17.3 0.0 1.4 1 0 0 1 1 1 1 Helix-turn-helix domain HTH_23 PF13384.6 gi|15922704|ref|NP_378373.1| - 0.0038 17.0 0.0 0.0072 16.1 0.0 1.4 1 0 0 1 1 1 1 Homeodomain-like domain HTH_27 PF13463.6 gi|15922704|ref|NP_378373.1| - 0.01 16.3 0.1 0.018 15.5 0.1 1.4 1 0 0 1 1 1 0 Winged helix DNA-binding domain HTH_8 PF02954.19 gi|15922704|ref|NP_378373.1| - 0.01 15.6 0.1 0.023 14.5 0.1 1.5 1 0 0 1 1 1 0 Bacterial regulatory protein, Fis family FUR PF01475.19 gi|15922704|ref|NP_378373.1| - 0.012 15.7 0.1 0.02 15.0 0.1 1.3 1 0 0 1 1 1 0 Ferric uptake regulator family DUF1441 PF07278.11 gi|15922704|ref|NP_378373.1| - 0.046 13.7 0.0 0.096 12.6 0.0 1.5 1 0 0 1 1 1 0 Protein of unknown function (DUF1441) Sigma70_r4 PF04545.16 gi|15922704|ref|NP_378373.1| - 0.067 12.7 0.1 0.12 11.9 0.1 1.5 1 0 0 1 1 1 0 Sigma-70, region 4 HTH_17 PF12728.7 gi|15922704|ref|NP_378373.1| - 0.075 13.2 0.4 0.17 12.1 0.4 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_38 PF13936.6 gi|15922704|ref|NP_378373.1| - 0.079 12.7 0.2 0.19 11.5 0.2 1.6 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_Crp_2 PF13545.6 gi|15922704|ref|NP_378373.1| - 0.081 12.9 0.1 0.17 11.9 0.1 1.5 1 0 0 1 1 1 0 Crp-like helix-turn-helix domain MarR PF01047.22 gi|15922704|ref|NP_378373.1| - 0.085 12.8 0.1 0.18 11.7 0.1 1.5 1 0 0 1 1 1 0 MarR family Phage_AlpA PF05930.12 gi|15922704|ref|NP_378373.1| - 0.15 11.9 0.1 0.36 10.7 0.1 1.6 1 0 0 1 1 1 0 Prophage CP4-57 regulatory protein (AlpA) TauE PF01925.19 gi|15922705|ref|NP_378374.1| - 7e-46 156.8 25.8 8.7e-46 156.5 25.8 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE DUF4311 PF14188.6 gi|15922705|ref|NP_378374.1| - 0.64 9.7 9.7 0.026 14.3 3.1 2.0 2 0 0 2 2 2 0 Domain of unknown function (DUF4311) DUF1634 PF07843.11 gi|15922707|ref|NP_378376.1| - 4.2e-28 97.4 7.8 4.8e-28 97.2 7.8 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1634) Ninjurin PF04923.12 gi|15922707|ref|NP_378376.1| - 0.69 9.9 6.6 2.3 8.2 6.6 1.8 1 1 0 1 1 1 0 Ninjurin Peptidase_M48_N PF16491.5 gi|15922707|ref|NP_378376.1| - 3.3 7.6 12.6 0.57 10.0 8.7 1.6 2 0 0 2 2 2 0 CAAX prenyl protease N-terminal, five membrane helices TauE PF01925.19 gi|15922708|ref|NP_378377.1| - 1.2e-43 149.4 26.4 1.4e-43 149.2 26.4 1.0 1 0 0 1 1 1 1 Sulfite exporter TauE/SafE DUF502 PF04367.13 gi|15922708|ref|NP_378377.1| - 0.22 11.4 3.1 8.3 6.4 0.2 2.7 2 0 0 2 2 2 0 Protein of unknown function (DUF502) Rick_17kDa_Anti PF05433.15 gi|15922708|ref|NP_378377.1| - 4.3 7.3 10.5 4.4 7.3 0.6 3.1 3 0 0 3 3 3 0 Glycine zipper 2TM domain Trep_Strep PF09605.10 gi|15922708|ref|NP_378377.1| - 8.8 6.3 24.2 4.7 7.1 6.6 3.8 2 2 0 2 2 2 0 Hypothetical bacterial integral membrane protein (Trep_Strep) BclA_C PF18573.1 gi|15922709|ref|NP_378378.1| - 0.029 14.3 2.2 0.039 13.8 0.7 1.8 1 1 1 2 2 2 0 BclA C-terminal domain TraE PF05309.11 gi|15922709|ref|NP_378378.1| - 0.073 12.4 0.2 0.19 11.1 0.0 1.7 2 0 0 2 2 2 0 TraE protein Glycos_transf_2 PF00535.26 gi|15922710|ref|NP_378379.1| - 1.7e-11 44.2 0.0 2.4e-11 43.7 0.0 1.3 1 0 0 1 1 1 1 Glycosyl transferase family 2 Glyco_tranf_2_3 PF13641.6 gi|15922710|ref|NP_378379.1| - 4.5e-06 26.7 0.0 9.9e-06 25.6 0.0 1.5 1 1 0 1 1 1 1 Glycosyltransferase like family 2 Cas_Csn2 PF09711.10 gi|15922710|ref|NP_378379.1| - 0.019 14.6 2.6 0.042 13.5 2.6 1.5 1 0 0 1 1 1 0 CRISPR-associated protein (Cas_Csn2) MS_channel PF00924.18 gi|15922713|ref|NP_378382.1| - 9.5e-22 77.6 7.1 9.5e-22 77.6 7.1 1.8 2 0 0 2 2 2 1 Mechanosensitive ion channel Macro PF01661.21 gi|15922714|ref|NP_378383.1| - 1.2e-36 125.4 0.1 1.6e-36 124.9 0.1 1.2 1 0 0 1 1 1 1 Macro domain DUF3782 PF12644.7 gi|15922714|ref|NP_378383.1| - 0.0019 18.3 0.1 0.0049 17.0 0.0 1.8 2 0 0 2 2 2 1 Protein of unknown function (DUF3782) DUF3197 PF11432.8 gi|15922714|ref|NP_378383.1| - 0.033 14.1 0.0 0.059 13.3 0.0 1.4 1 0 0 1 1 1 0 Protein of unknown function (DUF3197) Phage_holin_6_1 PF09682.10 gi|15922714|ref|NP_378383.1| - 0.067 13.6 0.8 1 9.9 0.0 2.7 3 0 0 3 3 3 0 Bacteriophage holin of superfamily 6 (Holin_LLH) ANAPC3 PF12895.7 gi|15922716|ref|NP_378385.1| - 4.7e-17 62.0 2.4 7.2e-15 55.0 0.5 4.0 2 2 2 4 4 4 2 Anaphase-promoting complex, cyclosome, subunit 3 TPR_12 PF13424.6 gi|15922716|ref|NP_378385.1| - 4.4e-13 49.3 10.6 0.00013 22.2 0.0 5.6 3 1 1 5 5 5 3 Tetratricopeptide repeat TPR_8 PF13181.6 gi|15922716|ref|NP_378385.1| - 6.9e-09 35.2 30.2 1.1e-06 28.3 0.2 7.8 9 0 0 9 9 7 2 Tetratricopeptide repeat TPR_15 PF13429.6 gi|15922716|ref|NP_378385.1| - 1.2e-08 34.5 6.8 0.016 14.5 0.7 3.3 1 1 2 3 3 3 3 Tetratricopeptide repeat TPR_6 PF13174.6 gi|15922716|ref|NP_378385.1| - 1.7e-08 34.6 14.3 0.023 15.3 0.1 6.4 8 0 0 8 8 5 2 Tetratricopeptide repeat TPR_2 PF07719.17 gi|15922716|ref|NP_378385.1| - 2.2e-08 33.6 0.8 8.7e-07 28.6 0.1 6.3 8 1 0 8 8 6 2 Tetratricopeptide repeat TPR_7 PF13176.6 gi|15922716|ref|NP_378385.1| - 2.2e-08 33.5 8.9 3.4e-06 26.7 0.0 5.3 7 1 0 7 7 3 1 Tetratricopeptide repeat TPR_1 PF00515.28 gi|15922716|ref|NP_378385.1| - 1.5e-07 30.9 0.2 1.5e-07 30.9 0.2 5.4 7 0 0 7 7 5 2 Tetratricopeptide repeat TPR_14 PF13428.6 gi|15922716|ref|NP_378385.1| - 9.4e-07 29.2 7.7 0.0053 17.5 0.0 6.4 2 2 5 8 8 6 1 Tetratricopeptide repeat TPR_16 PF13432.6 gi|15922716|ref|NP_378385.1| - 1.2e-05 25.9 2.8 4.7e-05 24.0 0.0 3.4 4 2 1 5 5 3 1 Tetratricopeptide repeat TPR_11 PF13414.6 gi|15922716|ref|NP_378385.1| - 5.5e-05 22.8 1.1 0.00024 20.7 0.1 2.8 2 1 0 2 2 1 1 TPR repeat TPR_19 PF14559.6 gi|15922716|ref|NP_378385.1| - 9.3e-05 22.9 1.3 0.00075 20.0 0.3 5.0 3 3 3 6 6 6 3 Tetratricopeptide repeat TPR_17 PF13431.6 gi|15922716|ref|NP_378385.1| - 0.00013 22.1 3.5 0.66 10.5 0.0 3.9 4 0 0 4 4 2 2 Tetratricopeptide repeat DUF627 PF04781.12 gi|15922716|ref|NP_378385.1| - 0.0011 18.9 3.9 1.8 8.6 0.0 4.3 5 0 0 5 5 5 1 Protein of unknown function (DUF627) TPR_21 PF09976.9 gi|15922716|ref|NP_378385.1| - 0.0012 18.5 2.6 0.0014 18.4 0.2 2.3 2 1 0 2 2 2 1 Tetratricopeptide repeat-like domain TPR_9 PF13371.6 gi|15922716|ref|NP_378385.1| - 0.0034 17.5 0.0 0.025 14.7 0.0 2.5 2 0 0 2 2 2 1 Tetratricopeptide repeat TPR_10 PF13374.6 gi|15922716|ref|NP_378385.1| - 0.0073 16.1 15.0 0.014 15.2 0.0 5.7 7 0 0 7 7 6 1 Tetratricopeptide repeat DNA_ligase_A_N PF04675.14 gi|15922716|ref|NP_378385.1| - 0.0083 16.5 4.4 0.34 11.2 0.6 2.6 2 1 0 2 2 2 1 DNA ligase N terminus Rapsyn_N PF10579.9 gi|15922716|ref|NP_378385.1| - 0.017 15.2 0.2 0.24 11.5 0.0 2.9 2 1 0 2 2 2 0 Rapsyn N-terminal myristoylation and linker region DUF3775 PF12616.8 gi|15922716|ref|NP_378385.1| - 0.026 14.5 0.1 0.35 10.9 0.1 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF3775) TPR_MalT PF17874.1 gi|15922716|ref|NP_378385.1| - 0.026 13.9 0.6 0.38 10.1 0.2 3.0 1 1 0 2 2 2 0 MalT-like TPR region Complex1_LYR PF05347.15 gi|15922716|ref|NP_378385.1| - 0.027 14.5 1.1 0.15 12.1 0.2 2.6 2 0 0 2 2 2 0 Complex 1 protein (LYR family) T6SS_VasJ PF16989.5 gi|15922716|ref|NP_378385.1| - 0.036 13.5 0.4 0.095 12.2 0.1 1.9 2 1 1 3 3 3 0 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ PPR PF01535.20 gi|15922716|ref|NP_378385.1| - 0.038 14.2 8.7 20 5.7 0.1 5.7 6 0 0 6 6 5 0 PPR repeat Sel1 PF08238.12 gi|15922716|ref|NP_378385.1| - 0.042 14.6 6.4 0.43 11.3 0.0 4.7 5 0 0 5 5 4 0 Sel1 repeat RVT_thumb PF06817.14 gi|15922716|ref|NP_378385.1| - 0.1 12.4 0.1 5.9 6.8 0.0 2.5 2 0 0 2 2 2 0 Reverse transcriptase thumb domain ANAPC5 PF12862.7 gi|15922716|ref|NP_378385.1| - 0.12 12.5 1.2 3.7 7.7 0.1 3.6 2 1 1 3 3 3 0 Anaphase-promoting complex subunit 5 Ribosomal_L22 PF00237.19 gi|15922716|ref|NP_378385.1| - 0.47 10.7 8.4 1.1 9.5 0.2 3.7 1 1 1 2 2 2 0 Ribosomal protein L22p/L17e TC1 PF15063.6 gi|15922716|ref|NP_378385.1| - 0.53 10.2 2.1 9.7 6.1 0.1 3.4 4 0 0 4 4 4 0 Thyroid cancer protein 1 TPR_20 PF14561.6 gi|15922716|ref|NP_378385.1| - 0.62 10.4 6.5 1.3 9.4 0.2 3.4 3 1 1 4 4 3 0 Tetratricopeptide repeat FRB_dom PF08771.11 gi|15922716|ref|NP_378385.1| - 0.84 10.1 7.9 18 5.8 0.0 4.0 3 2 1 4 4 4 0 FKBP12-rapamycin binding domain PPR_2 PF13041.6 gi|15922716|ref|NP_378385.1| - 1.3 9.2 4.8 84 3.5 0.1 4.1 5 0 0 5 5 3 0 PPR repeat family Glycos_transf_1 PF00534.20 gi|15922717|ref|NP_378386.1| - 1.3e-33 116.0 0.1 2.3e-33 115.1 0.1 1.4 1 0 0 1 1 1 1 Glycosyl transferases group 1 Glyco_trans_1_4 PF13692.6 gi|15922717|ref|NP_378386.1| - 3.9e-27 95.3 0.0 8.7e-27 94.2 0.0 1.6 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_transf_4 PF13439.6 gi|15922717|ref|NP_378386.1| - 2.1e-20 73.4 0.3 4.2e-20 72.4 0.3 1.5 1 0 0 1 1 1 1 Glycosyltransferase Family 4 Glyco_trans_1_2 PF13524.6 gi|15922717|ref|NP_378386.1| - 2.7e-08 34.1 0.0 7e-08 32.8 0.0 1.7 2 0 0 2 2 2 1 Glycosyl transferases group 1 Glyco_trans_4_4 PF13579.6 gi|15922717|ref|NP_378386.1| - 7.3e-05 23.3 0.0 0.0013 19.2 0.0 2.2 1 1 0 1 1 1 1 Glycosyl transferase 4-like domain Epimerase_2 PF02350.19 gi|15922717|ref|NP_378386.1| - 0.0054 15.6 0.1 0.016 14.1 0.0 1.7 2 0 0 2 2 2 1 UDP-N-acetylglucosamine 2-epimerase Jiraiya PF15038.6 gi|15922718|ref|NP_378387.1| - 0.16 11.4 4.3 0.18 11.2 4.3 1.1 1 0 0 1 1 1 0 Jiraiya MarR PF01047.22 gi|15922719|ref|NP_378388.1| - 2.8e-15 56.0 0.0 4.7e-15 55.3 0.0 1.4 1 0 0 1 1 1 1 MarR family HTH_27 PF13463.6 gi|15922719|ref|NP_378388.1| - 3.6e-12 46.6 0.0 5.8e-12 45.9 0.0 1.3 1 0 0 1 1 1 1 Winged helix DNA-binding domain TrmB PF01978.19 gi|15922719|ref|NP_378388.1| - 2e-09 37.2 0.1 3e-09 36.6 0.1 1.3 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB MarR_2 PF12802.7 gi|15922719|ref|NP_378388.1| - 7.6e-09 35.3 0.0 1e-08 34.9 0.0 1.2 1 0 0 1 1 1 1 MarR family HTH_5 PF01022.20 gi|15922719|ref|NP_378388.1| - 1.3e-05 25.0 0.0 0.00022 21.0 0.0 2.3 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_34 PF13601.6 gi|15922719|ref|NP_378388.1| - 1.7e-05 24.9 0.1 2.4e-05 24.4 0.1 1.2 1 0 0 1 1 1 1 Winged helix DNA-binding domain HTH_45 PF14947.6 gi|15922719|ref|NP_378388.1| - 3.8e-05 23.6 0.3 6.9e-05 22.8 0.3 1.5 1 0 0 1 1 1 1 Winged helix-turn-helix PadR PF03551.14 gi|15922719|ref|NP_378388.1| - 0.0016 18.4 0.0 0.0024 17.8 0.0 1.3 1 0 0 1 1 1 1 Transcriptional regulator PadR-like family HxlR PF01638.17 gi|15922719|ref|NP_378388.1| - 0.0019 18.0 0.1 0.0031 17.3 0.1 1.4 1 0 0 1 1 1 1 HxlR-like helix-turn-helix Fe_dep_repress PF01325.19 gi|15922719|ref|NP_378388.1| - 0.0066 16.6 0.0 0.011 15.9 0.0 1.3 1 0 0 1 1 1 1 Iron dependent repressor, N-terminal DNA binding domain RuvB_C PF05491.13 gi|15922719|ref|NP_378388.1| - 0.024 14.5 0.1 0.046 13.6 0.1 1.6 1 1 0 1 1 1 0 RuvB C-terminal winged helix domain MMS19_N PF14500.6 gi|15922719|ref|NP_378388.1| - 0.041 13.5 0.1 0.05 13.2 0.1 1.1 1 0 0 1 1 1 0 Dos2-interacting transcription regulator of RNA-Pol-II DUF3116 PF11313.8 gi|15922719|ref|NP_378388.1| - 0.044 13.6 0.0 0.29 11.0 0.0 2.1 1 1 1 2 2 2 0 Protein of unknown function (DUF3116) Glyco_hydro_67N PF03648.14 gi|15922719|ref|NP_378388.1| - 0.047 14.0 0.0 0.066 13.5 0.0 1.2 1 0 0 1 1 1 0 Glycosyl hydrolase family 67 N-terminus Rrf2 PF02082.20 gi|15922719|ref|NP_378388.1| - 0.051 13.9 0.0 0.095 13.1 0.0 1.4 1 0 0 1 1 1 0 Transcriptional regulator Ead_Ea22 PF13935.6 gi|15922719|ref|NP_378388.1| - 0.058 14.1 0.0 0.06 14.0 0.0 1.2 1 0 0 1 1 1 0 Ead/Ea22-like protein Penicillinase_R PF03965.16 gi|15922719|ref|NP_378388.1| - 0.072 13.5 0.1 0.12 12.7 0.1 1.7 1 1 0 1 1 1 0 Penicillinase repressor GntR PF00392.21 gi|15922719|ref|NP_378388.1| - 0.13 11.9 0.0 0.25 11.0 0.0 1.4 1 0 0 1 1 1 0 Bacterial regulatory proteins, gntR family DUF5321 PF17254.2 gi|15922720|ref|NP_378389.1| - 0.24 10.8 0.1 0.46 9.9 0.1 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5321) Rieske_3 PF18465.1 gi|15922722|ref|NP_378391.1| - 1.6e-15 57.1 0.5 8.8e-08 32.3 0.2 3.2 3 0 0 3 3 3 2 Rieske 3Fe-4S Molydop_binding PF01568.21 gi|15922722|ref|NP_378391.1| - 2.6e-13 50.0 0.0 5.3e-13 49.0 0.0 1.6 1 0 0 1 1 1 1 Molydopterin dinucleotide binding domain DUF4298 PF14131.6 gi|15922722|ref|NP_378391.1| - 0.065 13.2 0.5 0.19 11.7 0.5 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF4298) Rieske PF00355.26 gi|15922723|ref|NP_378392.1| - 1.8e-06 27.8 0.0 3.8e-06 26.8 0.0 1.5 1 0 0 1 1 1 1 Rieske [2Fe-2S] domain UCR_Fe-S_N PF10399.9 gi|15922723|ref|NP_378392.1| - 0.0025 17.1 0.5 0.0045 16.3 0.5 1.4 1 0 0 1 1 1 1 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal SoxE PF06525.11 gi|15922724|ref|NP_378393.1| - 5.5e-61 204.4 5.5 1.1e-60 203.5 5.5 1.5 1 0 0 1 1 1 1 Sulfocyanin (SoxE) domain Copper-bind PF00127.20 gi|15922724|ref|NP_378393.1| - 0.00031 21.1 0.0 0.00083 19.8 0.0 1.7 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family SpoIIIAH PF12685.7 gi|15922724|ref|NP_378393.1| - 0.021 14.6 0.3 0.028 14.3 0.3 1.2 1 0 0 1 1 1 0 SpoIIIAH-like protein Cu-oxidase_2 PF07731.14 gi|15922724|ref|NP_378393.1| - 0.088 12.5 1.2 1.6 8.5 0.1 2.7 2 1 1 3 3 3 0 Multicopper oxidase Mucin PF01456.17 gi|15922724|ref|NP_378393.1| - 0.14 12.1 35.7 0.25 11.3 35.7 1.4 1 0 0 1 1 1 0 Mucin-like glycoprotein UPF0014 PF03649.13 gi|15922724|ref|NP_378393.1| - 0.19 11.0 7.1 0.31 10.4 7.1 1.3 1 0 0 1 1 1 0 Uncharacterised protein family (UPF0014) DUF2500 PF10694.9 gi|15922724|ref|NP_378393.1| - 0.29 11.7 1.4 0.49 10.9 1.4 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF2500) Shisa PF13908.6 gi|15922724|ref|NP_378393.1| - 3.3 7.9 11.9 0.3 11.3 6.5 1.8 2 0 0 2 2 2 0 Wnt and FGF inhibitory regulator Alpha_GJ PF03229.13 gi|15922724|ref|NP_378393.1| - 4.9 7.7 14.7 8.5 7.0 14.7 1.4 1 0 0 1 1 1 0 Alphavirus glycoprotein J SoxE PF06525.11 gi|15922725|ref|NP_378394.1| - 9.5e-61 203.6 5.5 9.5e-61 203.6 5.5 1.7 2 0 0 2 2 2 1 Sulfocyanin (SoxE) domain Copper-bind PF00127.20 gi|15922725|ref|NP_378394.1| - 0.00035 21.0 0.0 0.00076 19.9 0.0 1.5 1 1 0 1 1 1 1 Copper binding proteins, plastocyanin/azurin family Cu-oxidase_2 PF07731.14 gi|15922725|ref|NP_378394.1| - 0.068 12.9 1.0 1.5 8.6 0.1 2.7 2 1 1 3 3 3 0 Multicopper oxidase SSP160 PF06933.11 gi|15922725|ref|NP_378394.1| - 0.25 9.5 14.9 0.014 13.6 9.9 1.3 2 0 0 2 2 2 0 Special lobe-specific silk protein SSP160 DUF3439 PF11921.8 gi|15922725|ref|NP_378394.1| - 3.7 7.5 14.6 8.8 6.3 14.6 1.7 1 0 0 1 1 1 0 Domain of unknown function (DUF3439) COX2 PF00116.20 gi|15922726|ref|NP_378395.1| - 5.6e-05 23.0 0.3 9.3e-05 22.3 0.3 1.3 1 1 0 1 1 1 1 Cytochrome C oxidase subunit II, periplasmic domain SPT_ssu-like PF11779.8 gi|15922726|ref|NP_378395.1| - 0.039 13.6 1.6 0.14 11.8 0.6 2.4 2 0 0 2 2 2 0 Small subunit of serine palmitoyltransferase-like Y_Y_Y PF07495.13 gi|15922726|ref|NP_378395.1| - 0.057 13.4 0.2 0.21 11.6 0.0 2.1 2 0 0 2 2 2 0 Y_Y_Y domain COX1 PF00115.20 gi|15922727|ref|NP_378396.1| - 1.9e-70 237.9 70.2 2.7e-70 237.4 70.2 1.2 1 0 0 1 1 1 1 Cytochrome C and Quinol oxidase polypeptide I DUF1404 PF07185.11 gi|15922728|ref|NP_378397.1| - 9.9e-61 204.3 18.2 1.1e-60 204.2 18.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1404) CPDase PF07823.11 gi|15922729|ref|NP_378398.1| - 0.13 11.9 0.0 0.14 11.9 0.0 1.2 1 0 0 1 1 1 0 Cyclic phosphodiesterase-like protein LicD PF04991.13 gi|15922730|ref|NP_378399.1| - 0.24 11.5 4.2 0.3 11.2 2.9 1.8 1 1 0 1 1 1 0 LicD family MFS_1 PF07690.16 gi|15922731|ref|NP_378400.1| - 2.6e-23 82.6 32.1 1.5e-14 53.7 15.7 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|15922731|ref|NP_378400.1| - 0.00012 21.2 18.3 0.003 16.5 8.1 2.4 1 1 1 2 2 2 2 Sugar (and other) transporter Radical_SAM PF04055.21 gi|15922732|ref|NP_378401.1| - 4.9e-15 56.3 0.0 4.5e-14 53.2 0.0 2.4 2 1 0 2 2 2 1 Radical SAM superfamily B12-binding PF02310.19 gi|15922732|ref|NP_378401.1| - 0.00022 21.3 0.0 0.0004 20.4 0.0 1.4 1 0 0 1 1 1 1 B12 binding domain PgaPase_1 PF06162.12 gi|15922732|ref|NP_378401.1| - 0.045 13.5 0.1 0.084 12.6 0.1 1.3 1 0 0 1 1 1 0 Putative pyroglutamyl peptidase PgaPase_1 MetOD1 PF18546.1 gi|15922732|ref|NP_378401.1| - 0.059 13.3 0.0 0.18 11.8 0.0 1.8 1 0 0 1 1 1 0 Metanogen output domain 1 PQQ_2 PF13360.6 gi|15922733|ref|NP_378402.1| - 3.4e-29 102.1 0.0 2.5e-21 76.4 0.0 2.4 1 1 1 2 2 2 2 PQQ-like domain PQQ PF01011.21 gi|15922733|ref|NP_378402.1| - 7.1e-25 85.7 9.4 9.8e-05 22.1 0.0 6.5 6 0 0 6 6 6 5 PQQ enzyme repeat PQQ_3 PF13570.6 gi|15922733|ref|NP_378402.1| - 5.4e-18 64.9 1.9 0.097 13.2 0.0 7.6 6 2 1 7 7 7 5 PQQ-like domain Amidohydro_3 PF07969.11 gi|15922734|ref|NP_378403.1| - 2.6e-32 112.9 0.0 1.6e-27 97.1 0.0 2.1 1 1 1 2 2 2 2 Amidohydrolase family Amidohydro_1 PF01979.20 gi|15922734|ref|NP_378403.1| - 6e-14 52.1 0.0 7.8e-14 51.7 0.0 1.1 1 0 0 1 1 1 1 Amidohydrolase family PNPase_C PF12111.8 gi|15922734|ref|NP_378403.1| - 0.18 11.2 0.1 0.39 10.2 0.1 1.5 1 0 0 1 1 1 0 Polyribonucleotide phosphorylase C terminal Pirin PF02678.16 gi|15922735|ref|NP_378404.1| - 5.1e-38 129.4 0.0 1.4e-37 127.9 0.0 1.7 2 0 0 2 2 2 1 Pirin Pirin_C PF05726.13 gi|15922735|ref|NP_378404.1| - 4.1e-27 94.6 0.0 2e-26 92.4 0.0 1.9 2 0 0 2 2 2 1 Pirin C-terminal cupin domain AMPK1_CBM PF16561.5 gi|15922735|ref|NP_378404.1| - 0.13 12.5 0.0 0.6 10.4 0.0 2.0 2 1 0 2 2 2 0 Glycogen recognition site of AMP-activated protein kinase UDG PF03167.19 gi|15922736|ref|NP_378405.1| - 1.1e-34 119.7 0.0 1.4e-34 119.4 0.0 1.1 1 0 0 1 1 1 1 Uracil DNA glycosylase superfamily MFS_1 PF07690.16 gi|15922738|ref|NP_378407.1| - 3.4e-21 75.6 50.6 2.7e-18 66.0 40.3 2.3 1 1 1 2 2 2 2 Major Facilitator Superfamily CxxCxxCC PF03692.15 gi|15922739|ref|NP_378408.1| - 2.8e-10 40.7 3.7 4.4e-10 40.1 3.7 1.3 1 0 0 1 1 1 1 Putative zinc- or iron-chelating domain MFS_1 PF07690.16 gi|15922740|ref|NP_378409.1| - 1.2e-22 80.4 53.3 1.2e-13 50.7 32.0 2.2 1 1 1 2 2 2 2 Major Facilitator Superfamily DUF5357 PF17310.2 gi|15922740|ref|NP_378409.1| - 0.79 8.2 5.0 1.6 7.2 5.0 1.4 1 0 0 1 1 1 0 Family of unknown function (DUF5357) TPP_enzyme_N PF02776.18 gi|15922741|ref|NP_378410.1| - 1.4e-44 151.7 0.0 2.9e-44 150.7 0.0 1.5 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain TPP_enzyme_C PF02775.21 gi|15922741|ref|NP_378410.1| - 7.1e-16 58.4 0.4 3e-15 56.3 0.0 2.2 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain TPP_enzyme_M PF00205.22 gi|15922741|ref|NP_378410.1| - 0.00021 21.1 0.0 0.0027 17.4 0.0 2.3 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, central domain TPX2 PF06886.11 gi|15922741|ref|NP_378410.1| - 0.036 14.3 11.5 0.11 12.8 11.5 1.8 1 0 0 1 1 1 0 Targeting protein for Xklp2 (TPX2) Voltage_CLC PF00654.20 gi|15922742|ref|NP_378411.1| - 1.6e-91 307.2 38.7 2.4e-91 306.7 33.0 2.0 2 0 0 2 2 2 2 Voltage gated chloride channel CBS PF00571.28 gi|15922742|ref|NP_378411.1| - 4.4e-12 46.3 0.1 4.3e-06 27.1 0.0 2.5 2 0 0 2 2 2 2 CBS domain DUF3463 PF11946.8 gi|15922743|ref|NP_378412.1| - 3e-28 98.3 0.6 4.7e-28 97.7 0.6 1.3 1 0 0 1 1 1 1 Domain of unknown function (DUF3463) Radical_SAM PF04055.21 gi|15922743|ref|NP_378412.1| - 2.3e-20 73.7 0.1 1.9e-19 70.7 0.0 2.0 1 1 1 2 2 2 1 Radical SAM superfamily Fer4_12 PF13353.6 gi|15922743|ref|NP_378412.1| - 3e-08 34.0 0.1 2.2e-07 31.3 0.0 2.0 1 1 0 2 2 2 1 4Fe-4S single cluster domain Fer4_14 PF13394.6 gi|15922743|ref|NP_378412.1| - 0.0013 18.9 1.5 0.0065 16.6 0.0 2.4 3 0 0 3 3 3 1 4Fe-4S single cluster domain 3HCDH PF00725.22 gi|15922744|ref|NP_378413.1| - 5.5e-05 23.7 0.0 5.8e-05 23.6 0.0 1.0 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 3HCDH_N PF02737.18 gi|15922745|ref|NP_378414.1| - 5.2e-64 215.4 0.0 6.5e-64 215.1 0.0 1.1 1 0 0 1 1 1 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 3HCDH PF00725.22 gi|15922745|ref|NP_378414.1| - 5.8e-24 84.5 0.0 1.6e-23 83.2 0.0 1.7 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain NAD_binding_2 PF03446.15 gi|15922745|ref|NP_378414.1| - 2.2e-06 27.9 0.0 4.6e-06 26.9 0.0 1.5 1 0 0 1 1 1 1 NAD binding domain of 6-phosphogluconate dehydrogenase NAD_Gly3P_dh_N PF01210.23 gi|15922745|ref|NP_378414.1| - 2.2e-05 24.5 0.3 5.7e-05 23.2 0.0 1.8 2 0 0 2 2 2 1 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus F420_oxidored PF03807.17 gi|15922745|ref|NP_378414.1| - 0.0016 19.0 0.0 0.0031 18.1 0.0 1.5 1 0 0 1 1 1 1 NADP oxidoreductase coenzyme F420-dependent 2-Hacid_dh_C PF02826.19 gi|15922745|ref|NP_378414.1| - 0.0023 17.3 0.0 0.0034 16.8 0.0 1.3 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain Pyr_redox_2 PF07992.14 gi|15922745|ref|NP_378414.1| - 0.0072 15.6 0.0 0.012 14.9 0.0 1.3 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase AlaDh_PNT_C PF01262.21 gi|15922745|ref|NP_378414.1| - 0.013 14.9 0.0 0.019 14.3 0.0 1.4 1 1 0 1 1 1 0 Alanine dehydrogenase/PNT, C-terminal domain Pyr_redox PF00070.27 gi|15922745|ref|NP_378414.1| - 0.02 15.4 0.0 0.056 14.0 0.0 1.8 1 0 0 1 1 1 0 Pyridine nucleotide-disulphide oxidoreductase ApbA PF02558.16 gi|15922745|ref|NP_378414.1| - 0.07 12.8 0.0 0.1 12.2 0.0 1.3 1 0 0 1 1 1 0 Ketopantoate reductase PanE/ApbA SHOCT PF09851.9 gi|15922745|ref|NP_378414.1| - 0.26 11.1 0.8 8.6 6.2 0.1 2.5 2 0 0 2 2 2 0 Short C-terminal domain AurF PF11583.8 gi|15922746|ref|NP_378415.1| - 2.9e-06 26.8 1.3 5.7e-06 25.8 0.0 1.9 2 0 0 2 2 2 1 P-aminobenzoate N-oxygenase AurF Rubrerythrin PF02915.17 gi|15922746|ref|NP_378415.1| - 1.8e-05 25.1 0.1 0.0002 21.8 0.0 2.3 2 0 0 2 2 2 1 Rubrerythrin Ribonuc_red_sm PF00268.21 gi|15922746|ref|NP_378415.1| - 2.7e-05 23.8 5.4 5.6e-05 22.8 5.4 1.4 1 1 0 1 1 1 1 Ribonucleotide reductase, small chain FA_desaturase_2 PF03405.14 gi|15922746|ref|NP_378415.1| - 0.0023 16.9 0.1 0.48 9.2 0.0 2.2 2 0 0 2 2 2 2 Fatty acid desaturase DUF4932 PF16286.5 gi|15922746|ref|NP_378415.1| - 0.0086 15.4 0.6 0.028 13.7 0.6 1.7 1 1 1 2 2 2 1 Domain of unknown function (DUF4932) MazE_antitoxin PF04014.18 gi|15922747|ref|NP_378416.1| - 1.1e-06 28.4 0.2 2.3e-06 27.4 0.2 1.6 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin PLU-1 PF08429.11 gi|15922747|ref|NP_378416.1| - 0.0019 17.4 0.4 0.024 13.8 0.0 2.0 2 0 0 2 2 2 1 PLU-1-like protein Mnd1 PF03962.15 gi|15922747|ref|NP_378416.1| - 0.16 12.3 2.6 0.2 12.0 0.4 2.3 2 1 0 2 2 2 0 Mnd1 HTH domain ECH_1 PF00378.20 gi|15922748|ref|NP_378417.1| - 7e-81 271.2 0.2 7.9e-81 271.1 0.2 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|15922748|ref|NP_378417.1| - 1.7e-41 142.9 0.8 8.9e-38 130.6 0.3 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase VapB_antitoxin PF09957.9 gi|15922748|ref|NP_378417.1| - 0.0024 17.8 1.5 0.061 13.3 1.7 2.8 2 1 0 2 2 2 1 Bacterial antitoxin of type II TA system, VapB Peptidase_S49 PF01343.18 gi|15922748|ref|NP_378417.1| - 0.065 13.2 0.0 0.19 11.7 0.0 1.8 1 0 0 1 1 1 0 Peptidase family S49 ECH_1 PF00378.20 gi|15922749|ref|NP_378418.1| - 5.1e-48 163.6 0.0 5.8e-48 163.4 0.0 1.0 1 0 0 1 1 1 1 Enoyl-CoA hydratase/isomerase ECH_2 PF16113.5 gi|15922749|ref|NP_378418.1| - 2.5e-30 106.1 0.0 4.6e-25 88.8 0.0 2.0 1 1 1 2 2 2 2 Enoyl-CoA hydratase/isomerase Thiolase_N PF00108.23 gi|15922750|ref|NP_378419.1| - 8.4e-19 67.9 0.1 1.1e-17 64.3 0.1 2.1 1 1 0 1 1 1 1 Thiolase, N-terminal domain Thiolase_C PF02803.18 gi|15922750|ref|NP_378419.1| - 2.6e-08 33.6 0.5 5.3e-07 29.3 0.0 2.7 2 1 0 2 2 2 1 Thiolase, C-terminal domain ketoacyl-synt PF00109.26 gi|15922750|ref|NP_378419.1| - 3.4e-05 23.5 5.7 0.00016 21.3 1.7 2.6 2 1 1 3 3 3 1 Beta-ketoacyl synthase, N-terminal domain Ketoacyl-synt_C PF02801.22 gi|15922750|ref|NP_378419.1| - 0.0013 18.7 0.2 0.57 10.2 0.0 3.5 4 0 0 4 4 4 1 Beta-ketoacyl synthase, C-terminal domain ACP_syn_III PF08545.10 gi|15922750|ref|NP_378419.1| - 0.037 13.9 0.5 0.085 12.7 0.5 1.6 1 0 0 1 1 1 0 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DUF35_N PF12172.8 gi|15922751|ref|NP_378420.1| - 3.6e-10 39.5 0.0 5.6e-10 38.9 0.0 1.3 1 0 0 1 1 1 1 Rubredoxin-like zinc ribbon domain (DUF35_N) OB_aCoA_assoc PF01796.17 gi|15922751|ref|NP_378420.1| - 4.8e-09 36.1 0.0 7.5e-09 35.5 0.0 1.3 1 0 0 1 1 1 1 DUF35 OB-fold domain, acyl-CoA-associated CxC5 PF18718.1 gi|15922751|ref|NP_378420.1| - 0.042 13.9 2.3 0.13 12.4 2.6 1.5 1 1 1 2 2 2 0 CxC5 like cysteine cluster associated with KDZ transposases DUF3724 PF12521.8 gi|15922751|ref|NP_378420.1| - 0.13 12.2 0.1 0.32 11.0 0.1 1.7 1 0 0 1 1 1 0 Protein of unknown function (DUF3724) AMP-binding PF00501.28 gi|15922752|ref|NP_378421.1| - 3.2e-16 59.0 0.1 4.8e-16 58.4 0.1 1.3 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C_2 PF14535.6 gi|15922752|ref|NP_378421.1| - 8.8e-14 51.6 0.3 2.8e-13 50.0 0.1 1.9 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain MrpF_PhaF PF04066.13 gi|15922753|ref|NP_378422.1| - 1.6 9.2 10.3 0.4 11.1 6.0 2.0 2 0 0 2 2 2 0 Multiple resistance and pH regulation protein F (MrpF / PhaF) SLATT_1 PF18181.1 gi|15922754|ref|NP_378423.1| - 0.33 10.9 0.1 0.33 10.9 0.1 1.6 2 0 0 2 2 2 0 SMODS and SLOG-associating 2TM effector domain 1 MFS_1 PF07690.16 gi|15922755|ref|NP_378424.1| - 1.6e-37 129.3 63.8 3.5e-31 108.4 38.0 1.8 1 1 1 2 2 2 2 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|15922755|ref|NP_378424.1| - 1.6e-21 76.7 24.9 2.7e-17 62.8 7.1 2.8 2 1 0 2 2 2 2 Sugar (and other) transporter MFS_5 PF05631.14 gi|15922755|ref|NP_378424.1| - 3.9e-07 29.3 3.8 7.5e-07 28.4 3.8 1.5 1 0 0 1 1 1 1 Sugar-tranasporters, 12 TM MFS_1_like PF12832.7 gi|15922755|ref|NP_378424.1| - 0.0046 15.9 25.5 0.0059 15.5 9.3 2.2 2 0 0 2 2 2 2 MFS_1 like family Methyltr_RsmB-F PF01189.17 gi|15922756|ref|NP_378425.1| - 4.5e-32 111.3 0.1 1.6e-31 109.6 0.1 1.8 1 1 0 1 1 1 1 16S rRNA methyltransferase RsmB/F HEPN PF05168.14 gi|15922757|ref|NP_378426.1| - 0.082 13.0 1.6 1.3 9.2 0.1 2.1 1 1 1 2 2 2 0 HEPN domain RmlD_sub_bind PF04321.17 gi|15922758|ref|NP_378427.1| - 1.6e-19 70.1 0.0 1.9e-19 69.9 0.0 1.1 1 0 0 1 1 1 1 RmlD substrate binding domain Epimerase PF01370.21 gi|15922758|ref|NP_378427.1| - 2.6e-06 27.1 0.0 3.4e-06 26.7 0.0 1.2 1 0 0 1 1 1 1 NAD dependent epimerase/dehydratase family Sugar_tr PF00083.24 gi|15922761|ref|NP_378430.1| - 1.6e-54 185.5 19.1 2e-54 185.2 19.1 1.0 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|15922761|ref|NP_378430.1| - 1.2e-23 83.6 59.8 1.3e-21 76.9 31.7 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily Orai-1 PF07856.12 gi|15922761|ref|NP_378430.1| - 0.019 14.6 0.1 0.059 13.1 0.1 1.8 1 0 0 1 1 1 0 Mediator of CRAC channel activity Gly-zipper_Omp PF13488.6 gi|15922761|ref|NP_378430.1| - 0.07 13.1 0.5 0.07 13.1 0.5 2.3 3 0 0 3 3 3 0 Glycine zipper DUF3961 PF13106.6 gi|15922761|ref|NP_378430.1| - 0.33 10.6 7.4 0.18 11.5 0.5 3.2 3 0 0 3 3 3 0 Domain of unknown function (DUF3961) PaREP1 PF05942.11 gi|15922762|ref|NP_378431.1| - 8.6e-19 67.6 3.5 1.1e-18 67.2 3.5 1.2 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family Med29 PF11568.8 gi|15922762|ref|NP_378431.1| - 0.064 13.5 1.0 2.3 8.4 0.1 2.1 2 0 0 2 2 2 0 Mediator complex subunit 29 DUF2604 PF10790.9 gi|15922762|ref|NP_378431.1| - 0.11 12.8 0.0 0.17 12.2 0.0 1.3 1 0 0 1 1 1 0 Protein of Unknown function (DUF2604) DUF357 PF04010.13 gi|15922762|ref|NP_378431.1| - 0.15 12.2 2.8 4.9 7.3 0.1 3.0 2 1 1 3 3 3 0 Protein of unknown function (DUF357) Transposase_20 PF02371.16 gi|15922763|ref|NP_378432.1| - 1.1e-24 86.5 0.0 1.8e-24 85.9 0.0 1.4 1 0 0 1 1 1 1 Transposase IS116/IS110/IS902 family DEDD_Tnp_IS110 PF01548.17 gi|15922763|ref|NP_378432.1| - 1.6e-06 28.1 0.1 6.5e-06 26.1 0.0 2.1 2 1 0 2 2 2 1 Transposase DUF445 PF04286.12 gi|15922763|ref|NP_378432.1| - 0.015 15.2 0.3 0.021 14.7 0.3 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF445) TFIIB_C_1 PF18542.1 gi|15922763|ref|NP_378432.1| - 0.023 14.7 0.2 0.6 10.2 0.1 2.3 2 0 0 2 2 2 0 Transcription factor IIB C-terminal module 1 XTBD PF11952.8 gi|15922763|ref|NP_378432.1| - 0.11 12.3 0.3 0.32 10.8 0.1 1.9 2 0 0 2 2 2 0 XRN-Two Binding Domain, XTBD Syntaxin PF00804.25 gi|15922763|ref|NP_378432.1| - 0.17 11.6 2.6 0.23 11.1 1.7 1.6 1 1 0 1 1 1 0 Syntaxin KIP1 PF07765.12 gi|15922763|ref|NP_378432.1| - 1.9 8.6 5.5 5.9 7.1 0.5 3.2 3 0 0 3 3 3 0 KIP1-like protein OrfB_Zn_ribbon PF07282.11 gi|15922764|ref|NP_378433.1| - 9.6e-22 76.7 1.8 4.7e-21 74.5 0.4 2.4 2 0 0 2 2 2 1 Putative transposase DNA-binding domain LytTR PF04397.15 gi|15922764|ref|NP_378433.1| - 0.022 15.0 0.2 0.068 13.4 0.2 1.8 1 0 0 1 1 1 0 LytTr DNA-binding domain OAF PF14941.6 gi|15922764|ref|NP_378433.1| - 0.024 14.1 0.2 0.067 12.6 0.0 1.7 2 0 0 2 2 2 0 Transcriptional regulator, Out at first TPP_enzyme_C PF02775.21 gi|15922765|ref|NP_378434.1| - 1e-30 106.6 0.3 1.8e-30 105.8 0.1 1.5 2 0 0 2 2 2 1 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain PFO_beta_C PF12367.8 gi|15922765|ref|NP_378434.1| - 1.7e-24 85.7 0.5 3.3e-24 84.8 0.5 1.4 1 0 0 1 1 1 1 Pyruvate ferredoxin oxidoreductase beta subunit C terminal PIN_2 PF10130.9 gi|15922766|ref|NP_378435.1| - 0.14 12.3 0.0 0.19 12.0 0.0 1.2 1 0 0 1 1 1 0 PIN domain POR_N PF01855.19 gi|15922767|ref|NP_378436.1| - 1.9e-58 197.9 0.0 3.1e-58 197.3 0.0 1.3 1 0 0 1 1 1 1 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg POR PF01558.18 gi|15922767|ref|NP_378436.1| - 5.9e-40 137.2 0.7 2.2e-39 135.3 0.4 2.1 2 0 0 2 2 2 1 Pyruvate ferredoxin/flavodoxin oxidoreductase PFOR_II PF17147.4 gi|15922767|ref|NP_378436.1| - 9.2e-10 38.7 0.1 6.1e-09 36.1 0.0 2.4 2 0 0 2 2 2 1 Pyruvate:ferredoxin oxidoreductase core domain II Transketolase_C PF02780.20 gi|15922767|ref|NP_378436.1| - 3.2e-07 30.3 0.0 1.3e-06 28.3 0.0 2.0 2 0 0 2 2 2 1 Transketolase, C-terminal domain TPP_enzyme_N PF02776.18 gi|15922767|ref|NP_378436.1| - 3.2e-05 23.6 0.4 0.0029 17.2 0.4 3.1 3 0 0 3 3 3 1 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain Nitro_FeMo-Co PF02579.17 gi|15922767|ref|NP_378436.1| - 0.018 15.4 0.0 0.077 13.3 0.0 2.2 1 0 0 1 1 1 0 Dinitrogenase iron-molybdenum cofactor Glyco_hydro_97 PF10566.9 gi|15922767|ref|NP_378436.1| - 0.085 12.1 0.2 0.16 11.3 0.2 1.4 1 0 0 1 1 1 0 Glycoside hydrolase 97 ZnuA PF01297.17 gi|15922767|ref|NP_378436.1| - 0.15 11.4 0.7 17 4.7 0.1 2.5 3 0 0 3 3 3 0 Zinc-uptake complex component A periplasmic Radical_SAM PF04055.21 gi|15922767|ref|NP_378436.1| - 0.15 12.4 0.3 1.6 9.1 0.1 2.6 2 1 0 2 2 2 0 Radical SAM superfamily ABC_tran PF00005.27 gi|15922769|ref|NP_378438.1| - 7.5e-32 110.7 0.2 7e-31 107.6 0.0 1.9 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|15922769|ref|NP_378438.1| - 1.8e-11 44.4 0.1 0.00016 21.6 0.2 2.4 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|15922769|ref|NP_378438.1| - 0.00012 21.8 0.0 0.00021 20.9 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|15922769|ref|NP_378438.1| - 0.00061 20.3 0.7 0.0016 19.0 0.7 1.9 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|15922769|ref|NP_378438.1| - 0.00062 20.2 0.0 0.0011 19.3 0.0 1.5 1 0 0 1 1 1 1 AAA ATPase domain SMC_N PF02463.19 gi|15922769|ref|NP_378438.1| - 0.00075 19.0 0.2 0.031 13.7 0.0 2.5 2 1 1 3 3 3 1 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|15922769|ref|NP_378438.1| - 0.0011 18.7 0.0 0.002 17.9 0.0 1.6 1 1 0 1 1 1 1 AAA ATPase domain NTPase_1 PF03266.15 gi|15922769|ref|NP_378438.1| - 0.0016 18.4 5.4 0.41 10.5 0.1 3.3 2 1 2 4 4 4 1 NTPase AAA_22 PF13401.6 gi|15922769|ref|NP_378438.1| - 0.002 18.4 0.0 0.0057 16.9 0.0 1.8 1 1 0 1 1 1 1 AAA domain NACHT PF05729.12 gi|15922769|ref|NP_378438.1| - 0.0022 17.9 0.1 0.047 13.6 0.0 2.3 2 0 0 2 2 2 1 NACHT domain AAA PF00004.29 gi|15922769|ref|NP_378438.1| - 0.0073 16.7 0.7 0.042 14.3 0.7 2.4 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) MMR_HSR1 PF01926.23 gi|15922769|ref|NP_378438.1| - 0.0097 16.0 0.2 0.056 13.5 0.1 2.3 1 1 0 1 1 1 1 50S ribosome-binding GTPase SRP54 PF00448.22 gi|15922769|ref|NP_378438.1| - 0.011 15.4 0.0 0.021 14.4 0.0 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain DUF4162 PF13732.6 gi|15922769|ref|NP_378438.1| - 0.013 16.2 0.7 0.042 14.6 0.7 1.9 1 0 0 1 1 1 0 Domain of unknown function (DUF4162) TsaE PF02367.17 gi|15922769|ref|NP_378438.1| - 0.014 15.4 0.0 0.03 14.3 0.0 1.6 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA_30 PF13604.6 gi|15922769|ref|NP_378438.1| - 0.018 14.8 0.0 0.034 13.9 0.0 1.6 1 1 0 1 1 1 0 AAA domain AAA_5 PF07728.14 gi|15922769|ref|NP_378438.1| - 0.022 14.8 0.1 0.18 11.8 0.0 2.3 2 1 0 2 2 2 0 AAA domain (dynein-related subfamily) RsgA_GTPase PF03193.16 gi|15922769|ref|NP_378438.1| - 0.027 14.4 1.3 0.067 13.1 0.1 2.2 3 0 0 3 3 3 0 RsgA GTPase AAA_33 PF13671.6 gi|15922769|ref|NP_378438.1| - 0.044 13.9 0.0 0.1 12.7 0.0 1.9 2 1 0 2 2 2 0 AAA domain cobW PF02492.19 gi|15922769|ref|NP_378438.1| - 0.046 13.3 0.0 0.1 12.2 0.0 1.6 1 0 0 1 1 1 0 CobW/HypB/UreG, nucleotide-binding domain AAA_7 PF12775.7 gi|15922769|ref|NP_378438.1| - 0.062 12.8 0.0 0.12 11.8 0.0 1.4 1 0 0 1 1 1 0 P-loop containing dynein motor region NB-ARC PF00931.22 gi|15922769|ref|NP_378438.1| - 0.068 12.3 0.9 0.13 11.4 0.0 1.9 3 0 0 3 3 3 0 NB-ARC domain AAA_24 PF13479.6 gi|15922769|ref|NP_378438.1| - 0.074 12.8 1.6 0.82 9.4 0.0 2.6 3 0 0 3 3 3 0 AAA domain AAA_25 PF13481.6 gi|15922769|ref|NP_378438.1| - 0.12 12.0 0.2 0.27 10.8 0.0 1.6 2 0 0 2 2 1 0 AAA domain AAA_27 PF13514.6 gi|15922769|ref|NP_378438.1| - 0.12 11.9 0.0 0.27 10.8 0.0 1.5 1 0 0 1 1 1 0 AAA domain ABC2_membrane_2 PF12679.7 gi|15922770|ref|NP_378439.1| - 2e-08 33.9 31.0 6.9e-08 32.1 31.0 1.7 1 1 0 1 1 1 1 ABC-2 family transporter protein CbiA PF01656.23 gi|15922771|ref|NP_378440.1| - 1e-07 32.1 0.0 1.5e-07 31.5 0.0 1.3 1 0 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ParA PF10609.9 gi|15922771|ref|NP_378440.1| - 1.4e-06 28.0 0.5 0.00015 21.3 0.5 2.2 1 1 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase AAA_31 PF13614.6 gi|15922771|ref|NP_378440.1| - 0.00031 20.7 3.0 0.017 15.1 0.1 2.3 1 1 1 2 2 2 2 AAA domain CBP_BcsQ PF06564.12 gi|15922771|ref|NP_378440.1| - 0.00084 18.9 0.0 0.0019 17.7 0.0 1.6 1 0 0 1 1 1 1 Cellulose biosynthesis protein BcsQ ArsA_ATPase PF02374.15 gi|15922771|ref|NP_378440.1| - 0.0013 18.0 1.2 0.086 12.0 0.0 2.7 2 1 0 3 3 3 1 Anion-transporting ATPase AAA_24 PF13479.6 gi|15922771|ref|NP_378440.1| - 0.044 13.5 0.0 0.072 12.8 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_25 PF13481.6 gi|15922771|ref|NP_378440.1| - 0.044 13.4 0.0 0.68 9.5 0.0 2.1 1 1 0 1 1 1 0 AAA domain ResIII PF04851.15 gi|15922771|ref|NP_378440.1| - 0.063 13.3 0.1 0.14 12.1 0.1 1.7 1 1 0 1 1 1 0 Type III restriction enzyme, res subunit Zeta_toxin PF06414.12 gi|15922771|ref|NP_378440.1| - 0.23 10.7 0.0 0.35 10.1 0.0 1.2 1 0 0 1 1 1 0 Zeta toxin Pkinase PF00069.25 gi|15922772|ref|NP_378441.1| - 1.6e-22 80.2 0.1 1.6e-21 76.9 0.0 2.1 2 0 0 2 2 2 1 Protein kinase domain Pkinase_Tyr PF07714.17 gi|15922772|ref|NP_378441.1| - 1.3e-07 31.2 0.0 5.9e-07 29.0 0.0 2.1 2 1 0 2 2 2 1 Protein tyrosine kinase DUF1955 PF09205.10 gi|15922772|ref|NP_378441.1| - 1.5e-05 24.8 0.6 4.7e-05 23.2 0.6 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF1955) Amidinotransf PF02274.17 gi|15922773|ref|NP_378442.1| - 2.4e-56 191.3 0.0 3.1e-56 190.9 0.0 1.1 1 0 0 1 1 1 1 Amidinotransferase PAD_porph PF04371.15 gi|15922773|ref|NP_378442.1| - 0.0018 17.6 0.1 0.0058 16.0 0.1 1.8 1 1 0 1 1 1 1 Porphyromonas-type peptidyl-arginine deiminase AhpC-TSA PF00578.21 gi|15922774|ref|NP_378443.1| - 1.3e-32 112.3 0.0 2.2e-32 111.6 0.0 1.3 1 0 0 1 1 1 1 AhpC/TSA family Redoxin PF08534.10 gi|15922774|ref|NP_378443.1| - 6.2e-17 61.7 0.0 9.5e-17 61.1 0.0 1.2 1 0 0 1 1 1 1 Redoxin 1-cysPrx_C PF10417.9 gi|15922774|ref|NP_378443.1| - 3.3e-12 46.0 0.1 5.6e-12 45.3 0.1 1.4 1 0 0 1 1 1 1 C-terminal domain of 1-Cys peroxiredoxin NicO PF03824.16 gi|15922775|ref|NP_378444.1| - 1.1e-92 310.4 12.6 1.1e-92 310.4 12.6 1.6 2 0 0 2 2 2 1 High-affinity nickel-transport protein GP41 PF00517.17 gi|15922775|ref|NP_378444.1| - 0.25 11.2 0.1 0.25 11.2 0.1 3.1 3 0 0 3 3 3 0 Retroviral envelope protein ABC2_membrane PF01061.24 gi|15922777|ref|NP_378446.1| - 1.4e-07 31.2 26.2 1.4e-07 31.2 26.2 1.8 1 1 0 1 1 1 1 ABC-2 type transporter ABC_tran PF00005.27 gi|15922778|ref|NP_378447.1| - 1.9e-24 86.7 0.0 3.3e-24 86.0 0.0 1.4 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|15922778|ref|NP_378447.1| - 2.4e-14 53.9 0.0 2.3e-09 37.5 0.0 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_15 PF13175.6 gi|15922778|ref|NP_378447.1| - 0.00089 19.1 0.1 0.13 12.0 0.2 2.2 1 1 1 2 2 2 1 AAA ATPase domain SMC_N PF02463.19 gi|15922778|ref|NP_378447.1| - 0.0041 16.6 0.1 0.73 9.2 0.0 2.1 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain NB-ARC PF00931.22 gi|15922778|ref|NP_378447.1| - 0.0088 15.3 0.1 0.051 12.8 0.1 1.9 1 1 0 1 1 1 1 NB-ARC domain AAA_13 PF13166.6 gi|15922778|ref|NP_378447.1| - 0.016 13.9 0.0 0.03 13.0 0.1 1.4 2 0 0 2 2 2 0 AAA domain AAA_16 PF13191.6 gi|15922778|ref|NP_378447.1| - 0.022 15.2 0.0 0.033 14.6 0.0 1.3 1 0 0 1 1 1 0 AAA ATPase domain PduV-EutP PF10662.9 gi|15922778|ref|NP_378447.1| - 0.023 14.4 0.1 0.049 13.4 0.1 1.5 1 0 0 1 1 1 0 Ethanolamine utilisation - propanediol utilisation MukB PF04310.12 gi|15922778|ref|NP_378447.1| - 0.031 14.1 0.1 0.055 13.3 0.1 1.4 1 0 0 1 1 1 0 MukB N-terminal AAA_22 PF13401.6 gi|15922778|ref|NP_378447.1| - 0.037 14.3 0.2 0.083 13.2 0.1 1.7 1 1 0 1 1 1 0 AAA domain AAA_18 PF13238.6 gi|15922778|ref|NP_378447.1| - 0.041 14.4 0.0 0.067 13.7 0.0 1.7 1 1 0 1 1 1 0 AAA domain AAA_29 PF13555.6 gi|15922778|ref|NP_378447.1| - 0.041 13.6 0.1 0.072 12.8 0.1 1.3 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|15922778|ref|NP_378447.1| - 0.05 14.1 0.2 0.098 13.1 0.2 1.6 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|15922778|ref|NP_378447.1| - 0.052 13.8 0.1 0.35 11.1 0.1 2.1 2 0 0 2 2 2 0 AAA domain TsaE PF02367.17 gi|15922778|ref|NP_378447.1| - 0.056 13.4 0.1 0.099 12.6 0.1 1.4 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE AAA PF00004.29 gi|15922778|ref|NP_378447.1| - 0.074 13.5 0.5 0.43 11.0 0.5 2.2 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) SbcCD_C PF13558.6 gi|15922778|ref|NP_378447.1| - 0.14 12.4 0.0 1.9 8.8 0.0 2.2 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit TrmO PF01980.16 gi|15922779|ref|NP_378448.1| - 2.1e-30 105.4 0.0 2.8e-30 105.0 0.0 1.1 1 0 0 1 1 1 1 tRNA-methyltransferase O US10 PF17617.2 gi|15922780|ref|NP_378449.1| - 0.005 17.0 0.0 0.0073 16.4 0.0 1.2 1 0 0 1 1 1 1 Viral unique short region 10 HicB_lk_antitox PF15919.5 gi|15922780|ref|NP_378449.1| - 0.011 15.9 0.0 0.079 13.1 0.0 2.1 2 0 0 2 2 2 0 HicB_like antitoxin of bacterial toxin-antitoxin system PNP_UDP_1 PF01048.20 gi|15922781|ref|NP_378450.1| - 7.2e-24 84.3 0.0 8.9e-24 84.0 0.0 1.1 1 0 0 1 1 1 1 Phosphorylase superfamily DUF2070 PF09843.9 gi|15922784|ref|NP_378453.1| - 0.67 8.2 15.4 0.73 8.0 15.4 1.0 1 0 0 1 1 1 0 Predicted membrane protein (DUF2070) DUF3792 PF12670.7 gi|15922784|ref|NP_378453.1| - 2.7 8.2 23.0 0.036 14.2 8.3 2.4 1 1 1 2 2 2 0 Protein of unknown function (DUF3792) TrkA_N PF02254.18 gi|15922785|ref|NP_378454.1| - 3.7e-16 59.4 0.3 5.6e-16 58.9 0.3 1.3 1 0 0 1 1 1 1 TrkA-N domain TrkA_C PF02080.21 gi|15922785|ref|NP_378454.1| - 0.00015 21.5 0.0 0.0018 18.1 0.0 2.4 2 0 0 2 2 2 1 TrkA-C domain Ion_trans_2 PF07885.16 gi|15922785|ref|NP_378454.1| - 0.0013 18.6 8.4 0.0025 17.7 8.4 1.5 1 0 0 1 1 1 1 Ion channel Sugar_tr PF00083.24 gi|15922786|ref|NP_378455.1| - 4e-37 128.1 27.2 5.2e-37 127.8 27.2 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|15922786|ref|NP_378455.1| - 8.6e-35 120.3 34.2 8.6e-35 120.3 34.2 2.1 1 1 1 2 2 2 2 Major Facilitator Superfamily MFS_4 PF06779.14 gi|15922786|ref|NP_378455.1| - 1.6e-08 34.3 4.9 1.6e-08 34.3 4.9 2.5 3 0 0 3 3 3 1 Uncharacterised MFS-type transporter YbfB AA_permease PF00324.21 gi|15922787|ref|NP_378456.1| - 2.1e-10 39.8 49.1 2.1e-10 39.8 49.1 2.0 1 1 1 2 2 2 1 Amino acid permease AA_permease_2 PF13520.6 gi|15922787|ref|NP_378456.1| - 1.4e-06 27.4 60.4 8.8e-06 24.8 60.4 1.9 1 1 0 1 1 1 1 Amino acid permease EAV_GS PF01309.18 gi|15922787|ref|NP_378456.1| - 2.4 7.7 7.3 4.2 7.0 2.1 2.7 2 0 0 2 2 2 0 Equine arteritis virus small envelope glycoprotein Takusan PF04822.13 gi|15922788|ref|NP_378457.1| - 0.00053 19.8 1.4 0.00053 19.8 1.4 1.1 1 0 0 1 1 1 1 Takusan DivIC PF04977.15 gi|15922788|ref|NP_378457.1| - 0.0006 19.5 3.7 0.0062 16.3 0.8 2.0 1 1 1 2 2 2 1 Septum formation initiator DUF948 PF06103.11 gi|15922788|ref|NP_378457.1| - 0.001 19.3 0.6 0.0015 18.8 0.6 1.3 1 1 0 1 1 1 1 Bacterial protein of unknown function (DUF948) FlaC_arch PF05377.11 gi|15922788|ref|NP_378457.1| - 0.0019 18.5 5.4 0.025 15.0 0.9 2.1 1 1 1 2 2 2 1 Flagella accessory protein C (FlaC) FlxA PF14282.6 gi|15922788|ref|NP_378457.1| - 0.0032 17.4 2.3 0.0038 17.2 2.3 1.1 1 0 0 1 1 1 1 FlxA-like protein Seryl_tRNA_N PF02403.22 gi|15922788|ref|NP_378457.1| - 0.0034 17.6 2.5 0.0049 17.1 2.5 1.3 1 1 0 1 1 1 1 Seryl-tRNA synthetase N-terminal domain EzrA PF06160.12 gi|15922788|ref|NP_378457.1| - 0.0039 15.4 2.8 0.0041 15.4 2.8 1.1 1 0 0 1 1 1 1 Septation ring formation regulator, EzrA YkyA PF10368.9 gi|15922788|ref|NP_378457.1| - 0.0043 16.8 3.2 0.0047 16.6 3.2 1.1 1 0 0 1 1 1 1 Putative cell-wall binding lipoprotein LXG PF04740.12 gi|15922788|ref|NP_378457.1| - 0.0055 16.4 2.7 0.0077 16.0 2.7 1.4 1 1 0 1 1 1 1 LXG domain of WXG superfamily Prefoldin PF02996.17 gi|15922788|ref|NP_378457.1| - 0.0057 16.6 3.6 0.21 11.5 0.3 2.0 1 1 1 2 2 2 1 Prefoldin subunit DUF883 PF05957.13 gi|15922788|ref|NP_378457.1| - 0.007 16.9 0.4 0.0083 16.7 0.4 1.1 1 0 0 1 1 1 1 Bacterial protein of unknown function (DUF883) ZapB PF06005.12 gi|15922788|ref|NP_378457.1| - 0.0075 16.7 0.7 1.5 9.3 0.1 2.2 1 1 1 2 2 2 1 Cell division protein ZapB Baculo_PEP_C PF04513.12 gi|15922788|ref|NP_378457.1| - 0.0093 16.0 1.1 0.01 15.8 1.1 1.1 1 0 0 1 1 1 1 Baculovirus polyhedron envelope protein, PEP, C terminus dCache_2 PF08269.11 gi|15922788|ref|NP_378457.1| - 0.013 14.7 0.6 0.013 14.7 0.6 1.0 1 0 0 1 1 1 0 Cache domain YtxH PF12732.7 gi|15922788|ref|NP_378457.1| - 0.015 15.8 2.7 0.21 12.1 2.7 2.0 1 1 0 1 1 1 0 YtxH-like protein LidA_Long_CC PF18641.1 gi|15922788|ref|NP_378457.1| - 0.015 15.4 1.9 0.015 15.4 1.9 1.1 1 0 0 1 1 1 0 LidA long coiled-coil domain DUF4533 PF15047.6 gi|15922788|ref|NP_378457.1| - 0.015 14.8 2.1 0.016 14.8 2.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF4533) TBCC_N PF16752.5 gi|15922788|ref|NP_378457.1| - 0.017 15.6 0.9 0.027 14.9 0.9 1.4 1 1 0 1 1 1 0 Tubulin-specific chaperone C N-terminal domain DASH_Dam1 PF08653.10 gi|15922788|ref|NP_378457.1| - 0.018 14.8 4.8 1.9 8.4 1.1 2.2 2 0 0 2 2 2 0 DASH complex subunit Dam1 TssO PF17561.2 gi|15922788|ref|NP_378457.1| - 0.022 14.9 4.9 0.027 14.6 4.9 1.1 1 0 0 1 1 1 0 Type VI secretion system, TssO Syntaxin-6_N PF09177.11 gi|15922788|ref|NP_378457.1| - 0.026 15.1 4.8 0.24 12.0 2.3 2.0 1 1 1 2 2 2 0 Syntaxin 6, N-terminal HSBP1 PF06825.12 gi|15922788|ref|NP_378457.1| - 0.026 14.4 12.5 0.062 13.2 6.9 2.3 1 1 1 2 2 2 0 Heat shock factor binding protein 1 HalX PF08663.10 gi|15922788|ref|NP_378457.1| - 0.027 14.8 1.8 0.027 14.8 1.8 1.8 1 1 1 2 2 2 0 HalX domain Sipho_Gp157 PF05565.11 gi|15922788|ref|NP_378457.1| - 0.027 14.5 3.5 0.033 14.2 3.5 1.1 1 0 0 1 1 1 0 Siphovirus Gp157 CorA PF01544.18 gi|15922788|ref|NP_378457.1| - 0.029 13.7 3.1 0.032 13.5 3.1 1.1 1 0 0 1 1 1 0 CorA-like Mg2+ transporter protein DUF632 PF04782.12 gi|15922788|ref|NP_378457.1| - 0.03 13.6 2.0 0.034 13.5 2.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF632) Ferritin PF00210.24 gi|15922788|ref|NP_378457.1| - 0.034 14.1 2.3 0.036 14.0 2.3 1.0 1 0 0 1 1 1 0 Ferritin-like domain Tektin PF03148.14 gi|15922788|ref|NP_378457.1| - 0.035 12.8 2.8 0.51 9.0 0.4 2.0 1 1 1 2 2 2 0 Tektin family LPP PF04728.13 gi|15922788|ref|NP_378457.1| - 0.037 14.4 6.6 0.52 10.7 6.6 2.1 1 1 0 1 1 1 0 Lipoprotein leucine-zipper Tup_N PF08581.10 gi|15922788|ref|NP_378457.1| - 0.037 14.3 1.9 0.054 13.8 1.9 1.3 1 0 0 1 1 1 0 Tup N-terminal DUF3375 PF11855.8 gi|15922788|ref|NP_378457.1| - 0.04 12.8 4.0 0.043 12.7 4.0 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3375) MnmE_helical PF12631.7 gi|15922788|ref|NP_378457.1| - 0.041 14.1 5.3 0.049 13.8 5.3 1.0 1 0 0 1 1 1 0 MnmE helical domain YabA PF06156.13 gi|15922788|ref|NP_378457.1| - 0.046 14.3 0.9 0.22 12.2 0.9 1.8 1 1 0 1 1 1 0 Initiation control protein YabA TSC22 PF01166.18 gi|15922788|ref|NP_378457.1| - 0.048 14.0 2.3 3.4 8.1 0.1 2.8 1 1 1 2 2 2 0 TSC-22/dip/bun family Mod_r PF07200.13 gi|15922788|ref|NP_378457.1| - 0.05 13.7 1.0 0.056 13.6 1.0 1.1 1 0 0 1 1 1 0 Modifier of rudimentary (Mod(r)) protein Cnn_1N PF07989.11 gi|15922788|ref|NP_378457.1| - 0.051 13.7 1.7 2.5 8.3 0.4 2.1 1 1 1 2 2 2 0 Centrosomin N-terminal motif 1 Zw10 PF06248.13 gi|15922788|ref|NP_378457.1| - 0.051 12.1 2.3 0.052 12.1 2.3 1.0 1 0 0 1 1 1 0 Centromere/kinetochore Zw10 DUF1192 PF06698.11 gi|15922788|ref|NP_378457.1| - 0.062 13.4 2.2 5.5 7.1 0.2 2.3 1 1 1 2 2 2 0 Protein of unknown function (DUF1192) NAAA-beta PF15508.6 gi|15922788|ref|NP_378457.1| - 0.063 13.6 0.5 1.1 9.7 0.5 2.1 1 1 0 1 1 1 0 beta subunit of N-acylethanolamine-hydrolyzing acid amidase APG6_N PF17675.1 gi|15922788|ref|NP_378457.1| - 0.068 13.7 1.4 0.077 13.5 1.4 1.1 1 0 0 1 1 1 0 Apg6 coiled-coil region AIP3 PF03915.13 gi|15922788|ref|NP_378457.1| - 0.083 12.0 9.0 0.096 11.8 9.0 1.1 1 0 0 1 1 1 0 Actin interacting protein 3 Prefoldin_2 PF01920.20 gi|15922788|ref|NP_378457.1| - 0.11 12.5 3.0 1.1 9.2 1.2 2.1 1 1 1 2 2 2 0 Prefoldin subunit Allexi_40kDa PF05549.11 gi|15922788|ref|NP_378457.1| - 0.12 11.9 1.7 0.13 11.8 1.7 1.0 1 0 0 1 1 1 0 Allexivirus 40kDa protein ParB PF08775.10 gi|15922788|ref|NP_378457.1| - 0.12 12.8 3.4 0.13 12.7 3.4 1.1 1 0 0 1 1 1 0 ParB family BLOC1_2 PF10046.9 gi|15922788|ref|NP_378457.1| - 0.12 12.6 5.2 2.4 8.5 5.2 2.0 1 1 0 1 1 1 0 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF677 PF05055.12 gi|15922788|ref|NP_378457.1| - 0.18 10.7 3.5 0.18 10.6 3.5 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF677) Ribosomal_L29 PF00831.23 gi|15922788|ref|NP_378457.1| - 0.21 11.6 2.9 4.3 7.4 0.1 2.3 2 1 0 2 2 2 0 Ribosomal L29 protein Tht1 PF04163.12 gi|15922788|ref|NP_378457.1| - 0.3 9.8 3.6 0.3 9.8 3.6 1.0 1 0 0 1 1 1 0 Tht1-like nuclear fusion protein DUF1664 PF07889.12 gi|15922788|ref|NP_378457.1| - 0.33 11.0 3.1 0.43 10.6 3.1 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1664) TraF_2 PF13729.6 gi|15922788|ref|NP_378457.1| - 0.4 10.0 9.0 0.46 9.8 9.0 1.0 1 0 0 1 1 1 0 F plasmid transfer operon, TraF, protein UXS1_N PF11803.8 gi|15922788|ref|NP_378457.1| - 0.47 10.8 3.4 0.86 10.0 0.4 2.0 1 1 1 2 2 2 0 UDP-glucuronate decarboxylase N-terminal YojJ PF10372.9 gi|15922788|ref|NP_378457.1| - 0.51 10.5 2.7 1.4 9.1 2.7 1.8 1 1 0 1 1 1 0 Bacterial membrane-spanning protein N-terminus HeLo PF14479.6 gi|15922788|ref|NP_378457.1| - 0.6 9.9 6.0 1.1 9.0 6.0 1.5 1 1 0 1 1 1 0 Prion-inhibition and propagation DUF2779 PF11074.8 gi|15922788|ref|NP_378457.1| - 0.79 10.2 5.0 42 4.6 5.0 2.0 1 1 0 1 1 1 0 Domain of unknown function(DUF2779) HisKA PF00512.25 gi|15922788|ref|NP_378457.1| - 1 9.4 3.9 5.1 7.2 3.9 2.0 1 1 0 1 1 1 0 His Kinase A (phospho-acceptor) domain XhlA PF10779.9 gi|15922788|ref|NP_378457.1| - 1.2 9.4 7.7 6.6 7.0 1.4 2.3 1 1 1 2 2 2 0 Haemolysin XhlA Halo_GVPC PF05465.13 gi|15922788|ref|NP_378457.1| - 1.3 9.3 5.4 6.2 7.2 0.6 2.9 3 0 0 3 3 3 0 Halobacterial gas vesicle protein C (GVPC) repeat Snf7 PF03357.21 gi|15922788|ref|NP_378457.1| - 1.5 8.4 12.4 1.7 8.2 12.4 1.1 1 0 0 1 1 1 0 Snf7 YvrJ PF12841.7 gi|15922788|ref|NP_378457.1| - 1.8 8.2 6.6 4.4 6.9 0.3 3.3 2 1 2 4 4 3 0 YvrJ protein family Pup PF05639.11 gi|15922788|ref|NP_378457.1| - 5.4 8.0 16.4 1.9 9.5 8.3 2.5 1 1 1 2 2 2 0 Pup-like protein DUF1958 PF09211.10 gi|15922789|ref|NP_378458.1| - 0.0051 17.1 0.5 0.017 15.4 0.5 1.9 1 0 0 1 1 1 1 Domain of unknown function (DUF1958) YhdX PF17444.2 gi|15922789|ref|NP_378458.1| - 0.098 12.5 0.0 0.32 10.9 0.0 1.9 1 0 0 1 1 1 0 Uncharacterized YhdX-like CHIP_TPR_N PF18391.1 gi|15922789|ref|NP_378458.1| - 0.13 13.1 1.6 0.53 11.1 1.6 2.1 1 1 0 1 1 1 0 CHIP N-terminal tetratricopeptide repeat domain GW PF13457.6 gi|15922789|ref|NP_378458.1| - 0.15 12.7 0.4 0.15 12.7 0.4 2.6 3 0 0 3 3 3 0 GW (Gly-Tryp) dipeptide domain COQ7 PF03232.13 gi|15922790|ref|NP_378459.1| - 0.022 14.6 0.2 0.056 13.2 0.2 1.7 1 1 0 1 1 1 0 Ubiquinone biosynthesis protein COQ7 DUF5534 PF17686.1 gi|15922790|ref|NP_378459.1| - 0.066 13.5 0.1 0.086 13.1 0.1 1.2 1 0 0 1 1 1 0 Family of unknown function (DUF5534) Spc7 PF08317.11 gi|15922791|ref|NP_378460.1| - 3.4e-05 22.9 11.4 4.4e-05 22.5 11.4 1.3 1 0 0 1 1 1 1 Spc7 kinetochore protein BLOC1_2 PF10046.9 gi|15922791|ref|NP_378460.1| - 4e-05 23.8 15.5 0.0027 18.0 5.3 2.4 1 1 1 2 2 2 2 Biogenesis of lysosome-related organelles complex-1 subunit 2 DUF745 PF05335.13 gi|15922791|ref|NP_378460.1| - 0.00015 21.6 5.0 0.00022 21.0 5.0 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF745) Laminin_I PF06008.14 gi|15922791|ref|NP_378460.1| - 0.00035 20.4 8.4 0.00048 19.9 8.4 1.2 1 0 0 1 1 1 1 Laminin Domain I MCPsignal PF00015.21 gi|15922791|ref|NP_378460.1| - 0.00066 19.5 1.5 0.039 13.8 0.2 2.2 1 1 1 2 2 2 1 Methyl-accepting chemotaxis protein (MCP) signalling domain SlyX PF04102.12 gi|15922791|ref|NP_378460.1| - 0.00098 19.7 15.4 0.0023 18.5 5.7 3.4 2 1 3 5 5 3 2 SlyX Arfaptin PF06456.13 gi|15922791|ref|NP_378460.1| - 0.0012 18.4 8.7 0.0043 16.7 4.1 2.1 1 1 1 2 2 2 1 Arfaptin-like domain KxDL PF10241.9 gi|15922791|ref|NP_378460.1| - 0.0013 19.0 14.1 0.11 12.8 5.7 3.4 2 1 2 4 4 3 2 Uncharacterized conserved protein WXG100 PF06013.12 gi|15922791|ref|NP_378460.1| - 0.003 17.7 1.5 0.17 12.1 0.2 3.0 1 1 2 3 3 3 1 Proteins of 100 residues with WXG MscS_porin PF12795.7 gi|15922791|ref|NP_378460.1| - 0.0048 16.5 3.9 0.013 15.0 4.0 1.6 1 1 1 2 2 2 1 Mechanosensitive ion channel porin domain Exonuc_VII_L PF02601.15 gi|15922791|ref|NP_378460.1| - 0.0054 16.3 9.9 0.011 15.4 9.8 1.6 1 1 0 1 1 1 1 Exonuclease VII, large subunit V_ATPase_I PF01496.19 gi|15922791|ref|NP_378460.1| - 0.0055 14.7 8.2 0.073 11.0 4.2 1.9 1 1 1 2 2 2 2 V-type ATPase 116kDa subunit family NPV_P10 PF05531.12 gi|15922791|ref|NP_378460.1| - 0.0073 16.8 4.8 0.24 11.9 2.1 3.1 1 1 1 2 2 2 1 Nucleopolyhedrovirus P10 protein SesA PF17107.5 gi|15922791|ref|NP_378460.1| - 0.0078 16.4 8.2 0.0087 16.2 6.1 2.0 1 1 1 2 2 2 1 N-terminal domain on NACHT_NTPase and P-loop NTPases DASH_Duo1 PF08651.10 gi|15922791|ref|NP_378460.1| - 0.0088 15.8 8.1 0.083 12.7 2.2 2.8 1 1 2 3 3 3 2 DASH complex subunit Duo1 RNase_T PF00929.24 gi|15922791|ref|NP_378460.1| - 0.011 16.3 3.3 0.037 14.6 3.2 1.9 1 1 0 1 1 1 0 Exonuclease DUF948 PF06103.11 gi|15922791|ref|NP_378460.1| - 0.011 15.9 3.1 0.23 11.7 3.2 2.7 1 1 0 1 1 1 0 Bacterial protein of unknown function (DUF948) RmuC PF02646.16 gi|15922791|ref|NP_378460.1| - 0.012 14.7 11.1 0.034 13.3 1.2 2.6 1 1 2 3 3 3 0 RmuC family Prominin PF05478.11 gi|15922791|ref|NP_378460.1| - 0.015 13.3 8.3 0.021 12.8 8.3 1.2 1 0 0 1 1 1 0 Prominin TMPIT PF07851.13 gi|15922791|ref|NP_378460.1| - 0.018 14.3 11.5 0.03 13.6 6.4 2.0 1 1 1 2 2 2 0 TMPIT-like protein Laminin_II PF06009.12 gi|15922791|ref|NP_378460.1| - 0.018 15.1 8.5 0.21 11.6 2.8 2.4 1 1 1 2 2 2 0 Laminin Domain II V-SNARE_C PF12352.8 gi|15922791|ref|NP_378460.1| - 0.026 14.8 2.5 0.83 10.0 0.9 2.4 2 0 0 2 2 2 0 Snare region anchored in the vesicle membrane C-terminus Jnk-SapK_ap_N PF09744.9 gi|15922791|ref|NP_378460.1| - 0.028 14.6 18.4 0.023 14.9 12.9 1.9 1 1 1 2 2 2 0 JNK_SAPK-associated protein-1 Taxilin PF09728.9 gi|15922791|ref|NP_378460.1| - 0.038 13.2 16.3 0.13 11.4 9.0 2.1 1 1 1 2 2 2 0 Myosin-like coiled-coil protein DUF16 PF01519.16 gi|15922791|ref|NP_378460.1| - 0.047 14.2 14.5 0.21 12.1 4.9 2.8 1 1 2 3 3 3 0 Protein of unknown function DUF16 APG17 PF04108.12 gi|15922791|ref|NP_378460.1| - 0.055 12.6 16.1 0.024 13.7 7.9 2.0 1 1 2 3 3 3 0 Autophagy protein Apg17 YkyA PF10368.9 gi|15922791|ref|NP_378460.1| - 0.058 13.1 22.8 0.19 11.4 20.7 2.2 1 1 1 2 2 2 0 Putative cell-wall binding lipoprotein Nsp1_C PF05064.13 gi|15922791|ref|NP_378460.1| - 0.068 13.0 0.4 0.068 13.0 0.4 2.5 1 1 1 2 2 2 0 Nsp1-like C-terminal region SOAR PF16533.5 gi|15922791|ref|NP_378460.1| - 0.069 13.1 9.9 1.4 8.9 0.3 3.4 1 1 1 2 2 2 0 STIM1 Orai1-activating region CorA PF01544.18 gi|15922791|ref|NP_378460.1| - 0.072 12.4 11.3 0.055 12.8 10.0 1.4 1 1 0 1 1 1 0 CorA-like Mg2+ transporter protein Occludin_ELL PF07303.13 gi|15922791|ref|NP_378460.1| - 0.075 13.8 12.7 1.7 9.4 0.7 2.9 1 1 1 2 2 2 0 Occludin homology domain Fib_alpha PF08702.10 gi|15922791|ref|NP_378460.1| - 0.08 13.1 14.2 0.17 12.1 9.3 2.3 1 1 1 2 2 2 0 Fibrinogen alpha/beta chain family Nup54 PF13874.6 gi|15922791|ref|NP_378460.1| - 0.09 12.9 7.9 0.91 9.6 7.7 2.2 1 1 0 1 1 1 0 Nucleoporin complex subunit 54 MutS_III PF05192.18 gi|15922791|ref|NP_378460.1| - 0.096 12.9 8.4 0.14 12.4 8.4 1.2 1 0 0 1 1 1 0 MutS domain III DUF3782 PF12644.7 gi|15922791|ref|NP_378460.1| - 0.097 12.8 11.6 1.9e+03 -0.9 11.6 4.1 1 1 0 1 1 1 0 Protein of unknown function (DUF3782) NYD-SP28_assoc PF14775.6 gi|15922791|ref|NP_378460.1| - 0.11 12.6 11.6 0.53 10.4 0.3 3.2 1 1 1 2 2 2 0 Sperm tail C-terminal domain FlgN PF05130.12 gi|15922791|ref|NP_378460.1| - 0.11 13.0 11.3 0.42 11.1 8.6 2.1 1 1 1 2 2 2 0 FlgN protein AAA_13 PF13166.6 gi|15922791|ref|NP_378460.1| - 0.12 11.0 17.3 0.042 12.5 10.7 2.0 1 1 1 2 2 2 0 AAA domain ING PF12998.7 gi|15922791|ref|NP_378460.1| - 0.12 13.0 15.7 0.11 13.1 10.7 2.5 1 1 1 2 2 2 0 Inhibitor of growth proteins N-terminal histone-binding ARGLU PF15346.6 gi|15922791|ref|NP_378460.1| - 0.13 12.2 19.8 1.6 8.6 19.7 2.2 1 1 1 2 2 2 0 Arginine and glutamate-rich 1 Adhesin_P1_N PF18652.1 gi|15922791|ref|NP_378460.1| - 0.23 11.5 2.6 1.4 9.0 0.6 2.4 1 1 1 2 2 2 0 Adhesin P1 N-terminal domain DUF1664 PF07889.12 gi|15922791|ref|NP_378460.1| - 0.3 11.1 10.7 1.8 8.6 2.5 2.5 1 1 1 2 2 2 0 Protein of unknown function (DUF1664) Syntaxin-6_N PF09177.11 gi|15922791|ref|NP_378460.1| - 0.32 11.6 8.3 0.65 10.6 7.5 1.9 1 1 0 1 1 1 0 Syntaxin 6, N-terminal APG6_N PF17675.1 gi|15922791|ref|NP_378460.1| - 0.35 11.4 13.4 0.51 10.9 13.4 1.3 1 0 0 1 1 1 0 Apg6 coiled-coil region Nre_C PF04895.12 gi|15922791|ref|NP_378460.1| - 0.46 10.4 3.4 1.7 8.6 1.1 2.4 1 1 1 2 2 2 0 Archaeal Nre, C-terminal LMBR1 PF04791.16 gi|15922791|ref|NP_378460.1| - 0.54 9.1 6.5 0.64 8.9 6.5 1.2 1 0 0 1 1 1 0 LMBR1-like membrane protein Nup88 PF10168.9 gi|15922791|ref|NP_378460.1| - 0.58 7.9 11.8 0.67 7.7 11.8 1.1 1 0 0 1 1 1 0 Nuclear pore component DUF1759 PF03564.15 gi|15922791|ref|NP_378460.1| - 0.61 10.0 11.5 2.1 8.2 6.6 2.7 1 1 1 2 2 2 0 Protein of unknown function (DUF1759) FlaC_arch PF05377.11 gi|15922791|ref|NP_378460.1| - 0.62 10.5 18.4 0.14 12.6 4.3 4.2 3 1 1 4 4 4 0 Flagella accessory protein C (FlaC) Sulfatase_C PF14707.6 gi|15922791|ref|NP_378460.1| - 0.64 10.8 3.1 8.9 7.1 0.6 2.6 1 1 1 2 2 2 0 C-terminal region of aryl-sulfatase Serine_rich PF08824.10 gi|15922791|ref|NP_378460.1| - 0.64 10.0 5.8 5.9 6.9 5.8 2.5 1 1 0 1 1 1 0 Serine rich protein interaction domain SpecificRecomb PF10136.9 gi|15922791|ref|NP_378460.1| - 0.68 8.2 3.6 1.1 7.5 1.5 1.8 1 1 1 2 2 2 0 Site-specific recombinase Sigma70_ner PF04546.13 gi|15922791|ref|NP_378460.1| - 0.73 9.7 14.3 2.6 7.9 11.7 2.6 1 1 2 3 3 3 0 Sigma-70, non-essential region Glutaredoxin2_C PF04399.13 gi|15922791|ref|NP_378460.1| - 0.82 9.5 7.1 5.1 6.9 1.5 2.9 1 1 2 3 3 3 0 Glutaredoxin 2, C terminal domain UPF0449 PF15136.6 gi|15922791|ref|NP_378460.1| - 0.82 10.2 11.7 1.3 9.5 5.6 2.7 1 1 1 2 2 2 0 Uncharacterised protein family UPF0449 Sec2p PF06428.11 gi|15922791|ref|NP_378460.1| - 1.3 9.0 17.0 2 8.4 4.4 2.6 2 1 1 3 3 2 0 GDP/GTP exchange factor Sec2p Fmp27_WPPW PF10359.9 gi|15922791|ref|NP_378460.1| - 1.3 7.8 14.5 0.52 9.1 11.2 1.8 1 1 1 2 2 2 0 RNA pol II promoter Fmp27 protein domain CCDC85 PF10226.9 gi|15922791|ref|NP_378460.1| - 1.3 8.6 15.1 9.7 5.8 10.9 2.9 1 1 1 2 2 2 0 CCDC85 family AATF-Che1 PF13339.6 gi|15922791|ref|NP_378460.1| - 1.5 9.5 8.2 2.3 8.9 7.5 1.6 1 1 1 2 2 2 0 Apoptosis antagonizing transcription factor SWIRM-assoc_3 PF16498.5 gi|15922791|ref|NP_378460.1| - 1.6 9.1 3.7 3.3 8.0 0.6 2.7 1 1 2 3 3 3 0 SWIRM-associated domain at the C-terminal Prefoldin_2 PF01920.20 gi|15922791|ref|NP_378460.1| - 1.6 8.7 18.3 2.2 8.3 14.5 2.8 1 1 1 2 2 2 0 Prefoldin subunit Sec20 PF03908.13 gi|15922791|ref|NP_378460.1| - 1.6 8.7 7.6 6.7 6.7 2.0 2.8 1 1 3 4 4 4 0 Sec20 DUF4200 PF13863.6 gi|15922791|ref|NP_378460.1| - 1.7 9.0 20.5 27 5.2 20.4 2.3 1 1 1 2 2 2 0 Domain of unknown function (DUF4200) OmpH PF03938.14 gi|15922791|ref|NP_378460.1| - 1.8 8.9 11.7 2 8.8 10.3 1.8 1 1 1 2 2 1 0 Outer membrane protein (OmpH-like) FapA PF03961.13 gi|15922791|ref|NP_378460.1| - 1.8 7.1 15.6 3 6.3 15.5 1.6 1 1 0 1 1 1 0 Flagellar Assembly Protein A TMF_TATA_bd PF12325.8 gi|15922791|ref|NP_378460.1| - 2.7 8.2 18.6 9 6.5 17.5 2.1 1 1 1 2 2 2 0 TATA element modulatory factor 1 TATA binding MetOD2 PF18548.1 gi|15922791|ref|NP_378460.1| - 2.7 8.2 11.0 0.26 11.4 3.8 2.6 1 1 1 2 2 2 0 Metanogen output domain 2 Matrilin_ccoil PF10393.9 gi|15922791|ref|NP_378460.1| - 3.3 7.7 8.6 7.7 6.5 1.0 3.9 4 1 1 5 5 4 0 Trimeric coiled-coil oligomerisation domain of matrilin FNIP_M PF14637.6 gi|15922791|ref|NP_378460.1| - 4 7.4 9.8 7.2 6.5 4.4 2.3 1 1 1 2 2 2 0 Folliculin-interacting protein middle domain DUF3450 PF11932.8 gi|15922791|ref|NP_378460.1| - 4.4 6.5 9.7 6.5 6.0 8.2 1.8 1 1 1 2 2 2 0 Protein of unknown function (DUF3450) LOH1CR12 PF10158.9 gi|15922791|ref|NP_378460.1| - 5.2 7.1 10.9 1.6 8.7 5.2 2.3 1 1 1 2 2 2 0 Tumour suppressor protein DUF4298 PF14131.6 gi|15922791|ref|NP_378460.1| - 5.5 7.0 13.3 3 7.9 4.1 3.4 1 1 2 3 3 3 0 Domain of unknown function (DUF4298) CSN5_C PF18323.1 gi|15922791|ref|NP_378460.1| - 6.6 7.7 7.5 23 6.0 5.3 2.5 2 1 0 2 2 1 0 Cop9 signalosome subunit 5 C-terminal domain zf-C4H2 PF10146.9 gi|15922791|ref|NP_378460.1| - 7.1 6.9 20.2 6.7 7.0 19.0 1.5 1 1 0 1 1 1 0 Zinc finger-containing protein XhlA PF10779.9 gi|15922791|ref|NP_378460.1| - 7.3 6.9 22.2 0.84 9.9 6.2 3.5 2 2 2 4 4 4 0 Haemolysin XhlA DEAD PF00270.29 gi|15922792|ref|NP_378461.1| - 2.3e-44 151.3 0.3 9.2e-44 149.3 0.1 1.8 2 0 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|15922792|ref|NP_378461.1| - 6e-29 100.6 0.1 2.5e-27 95.4 0.1 2.6 2 1 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|15922792|ref|NP_378461.1| - 2.2e-06 27.8 0.1 4.6e-06 26.7 0.0 1.5 2 0 0 2 2 2 1 Type III restriction enzyme, res subunit CMS1 PF14617.6 gi|15922792|ref|NP_378461.1| - 0.014 14.7 0.0 0.034 13.5 0.0 1.6 1 1 0 1 1 1 0 U3-containing 90S pre-ribosomal complex subunit T4SS-DNA_transf PF02534.14 gi|15922792|ref|NP_378461.1| - 0.097 11.5 0.2 0.17 10.7 0.0 1.4 2 0 0 2 2 2 0 Type IV secretory system Conjugative DNA transfer DEAD_2 PF06733.15 gi|15922792|ref|NP_378461.1| - 0.13 11.9 0.0 0.36 10.4 0.0 1.7 1 0 0 1 1 1 0 DEAD_2 AAA_22 PF13401.6 gi|15922792|ref|NP_378461.1| - 0.25 11.6 1.1 2.4 8.4 1.1 2.3 1 1 0 1 1 1 0 AAA domain ParBc_2 PF08857.11 gi|15922793|ref|NP_378462.1| - 0.072 13.2 0.0 0.085 12.9 0.0 1.2 1 0 0 1 1 1 0 Putative ParB-like nuclease Flavi_NS1 PF00948.21 gi|15922793|ref|NP_378462.1| - 0.11 11.3 0.1 0.24 10.2 0.0 1.5 2 0 0 2 2 2 0 Flavivirus non-structural Protein NS1 Lys_export PF03956.13 gi|15922794|ref|NP_378463.1| - 6.1e-47 159.6 12.2 6.1e-47 159.6 12.2 2.2 2 0 0 2 2 2 2 Lysine exporter LysO HemY_N PF07219.13 gi|15922794|ref|NP_378463.1| - 3.2 8.0 6.8 2.1 8.6 1.3 2.7 2 0 0 2 2 2 0 HemY protein N-terminus MFS_1 PF07690.16 gi|15922795|ref|NP_378464.1| - 3.6e-38 131.4 50.3 3.6e-38 131.4 50.3 2.0 1 1 1 2 2 2 1 Major Facilitator Superfamily DUF3007 PF11460.8 gi|15922795|ref|NP_378464.1| - 0.023 14.9 1.5 0.16 12.3 1.5 2.5 1 0 0 1 1 1 0 Protein of unknown function (DUF3007) zinc_ribbon_2 PF13240.6 gi|15922796|ref|NP_378465.1| - 6.8e-06 25.6 0.6 1.1e-05 24.9 0.6 1.4 1 0 0 1 1 1 1 zinc-ribbon domain zf-ribbon_3 PF13248.6 gi|15922796|ref|NP_378465.1| - 3.8e-05 22.9 1.3 6.6e-05 22.2 1.3 1.3 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|15922796|ref|NP_378465.1| - 6.8e-05 22.8 0.2 0.00011 22.2 0.2 1.3 1 0 0 1 1 1 1 Double zinc ribbon zinc_ribbon_15 PF17032.5 gi|15922796|ref|NP_378465.1| - 7.7e-05 23.4 0.5 0.00017 22.2 0.2 1.6 2 0 0 2 2 2 1 zinc-ribbon family HypA PF01155.19 gi|15922796|ref|NP_378465.1| - 0.0013 18.7 0.0 0.0021 18.1 0.0 1.2 1 0 0 1 1 1 1 Hydrogenase/urease nickel incorporation, metallochaperone, hypA zinc-ribbons_6 PF07191.12 gi|15922796|ref|NP_378465.1| - 0.0059 16.6 0.4 0.013 15.5 0.4 1.6 1 0 0 1 1 1 1 zinc-ribbons Nudix_N_2 PF14803.6 gi|15922796|ref|NP_378465.1| - 0.014 15.3 4.1 0.65 10.0 0.6 2.4 2 0 0 2 2 2 0 Nudix N-terminal Zn-ribbon_8 PF09723.10 gi|15922796|ref|NP_378465.1| - 0.024 14.7 7.9 2.1 8.5 5.5 3.1 2 1 0 2 2 2 0 Zinc ribbon domain zf-RING_7 PF02591.15 gi|15922796|ref|NP_378465.1| - 0.059 13.6 1.7 2.6 8.3 0.2 2.4 2 0 0 2 2 2 0 C4-type zinc ribbon domain DNA_ligase_ZBD PF03119.16 gi|15922796|ref|NP_378465.1| - 0.075 13.1 2.4 1.9 8.6 0.2 2.4 2 0 0 2 2 2 0 NAD-dependent DNA ligase C4 zinc finger domain zinc_ribbon_10 PF10058.9 gi|15922796|ref|NP_378465.1| - 0.13 12.0 1.9 1.4 8.7 0.1 2.6 2 0 0 2 2 2 0 Predicted integral membrane zinc-ribbon metal-binding protein Cys_rich_CPXG PF14255.6 gi|15922796|ref|NP_378465.1| - 0.17 11.8 3.7 4.4 7.3 0.3 2.6 2 0 0 2 2 2 0 Cysteine-rich CPXCG zf-C2H2_4 PF13894.6 gi|15922796|ref|NP_378465.1| - 0.3 12.0 2.8 26 6.0 0.2 2.8 2 0 0 2 2 2 0 C2H2-type zinc finger zf-C2H2 PF00096.26 gi|15922796|ref|NP_378465.1| - 0.41 11.2 3.1 11 6.6 0.2 2.6 2 0 0 2 2 2 0 Zinc finger, C2H2 type zf-ACC PF17848.1 gi|15922796|ref|NP_378465.1| - 0.62 10.2 3.1 5 7.3 0.2 2.6 2 0 0 2 2 2 0 Acetyl-coA carboxylase zinc finger domain Zn_ribbon_SprT PF17283.2 gi|15922796|ref|NP_378465.1| - 1.4 8.9 12.1 0.21 11.5 6.0 2.5 2 1 0 2 2 1 0 SprT-like zinc ribbon domain Zn_Tnp_IS1595 PF12760.7 gi|15922796|ref|NP_378465.1| - 1.6 8.8 7.4 3.1 7.8 0.5 2.4 1 1 1 2 2 2 0 Transposase zinc-ribbon domain Lar_restr_allev PF14354.6 gi|15922796|ref|NP_378465.1| - 2.5 8.5 6.2 10 6.6 0.3 2.4 1 1 1 2 2 2 0 Restriction alleviation protein Lar DUF35_N PF12172.8 gi|15922796|ref|NP_378465.1| - 5.5 7.0 8.2 16 5.5 8.2 1.8 1 1 0 1 1 1 0 Rubredoxin-like zinc ribbon domain (DUF35_N) Na_Ca_ex PF01699.24 gi|15922797|ref|NP_378466.1| - 8.3e-26 90.7 26.1 2.9e-13 50.0 11.7 2.0 2 0 0 2 2 2 2 Sodium/calcium exchanger protein FixQ PF05545.11 gi|15922797|ref|NP_378466.1| - 0.13 12.2 0.2 0.13 12.2 0.2 3.1 4 0 0 4 4 4 0 Cbb3-type cytochrome oxidase component FixQ DUF202 PF02656.15 gi|15922798|ref|NP_378467.1| - 4.9e-21 74.9 0.7 4.9e-21 74.9 0.7 1.8 2 0 0 2 2 2 1 Domain of unknown function (DUF202) GRIM-19 PF06212.12 gi|15922798|ref|NP_378467.1| - 0.021 14.8 0.0 0.032 14.2 0.0 1.4 1 0 0 1 1 1 0 GRIM-19 protein SdpI PF13630.6 gi|15922798|ref|NP_378467.1| - 0.13 12.4 2.7 0.59 10.3 2.7 2.0 1 1 0 1 1 1 0 SdpI/YhfL protein family Jagunal PF07086.12 gi|15922798|ref|NP_378467.1| - 0.14 12.2 2.9 0.12 12.5 0.5 1.7 1 1 1 2 2 2 0 Jagunal, ER re-organisation during oogenesis DHHC PF01529.20 gi|15922798|ref|NP_378467.1| - 0.19 11.9 4.8 0.073 13.2 0.7 1.8 1 1 1 2 2 2 0 DHHC palmitoyltransferase Tetraspanin PF00335.20 gi|15922798|ref|NP_378467.1| - 0.23 11.1 4.0 0.24 11.1 0.3 1.9 1 1 1 2 2 2 0 Tetraspanin family DUF373 PF04123.13 gi|15922798|ref|NP_378467.1| - 0.31 10.5 4.3 0.36 10.2 4.3 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF373) DUF3899 PF13038.6 gi|15922798|ref|NP_378467.1| - 0.37 11.3 5.6 1.8 9.1 0.0 2.6 2 1 0 2 2 2 0 Domain of unknown function (DUF3899) Resolvase PF00239.21 gi|15922800|ref|NP_378469.1| - 2e-23 83.1 0.1 3e-23 82.5 0.1 1.2 1 0 0 1 1 1 1 Resolvase, N terminal domain HTH_17 PF12728.7 gi|15922800|ref|NP_378469.1| - 3.3e-16 59.2 0.6 6.7e-16 58.2 0.6 1.6 1 0 0 1 1 1 1 Helix-turn-helix domain MerR PF00376.23 gi|15922800|ref|NP_378469.1| - 8.6e-07 28.6 0.1 2.2e-06 27.3 0.1 1.8 1 0 0 1 1 1 1 MerR family regulatory protein HTH_23 PF13384.6 gi|15922800|ref|NP_378469.1| - 0.00037 20.2 0.0 0.00091 19.0 0.0 1.6 1 0 0 1 1 1 1 Homeodomain-like domain MerR_1 PF13411.6 gi|15922800|ref|NP_378469.1| - 0.0011 19.0 0.1 0.0026 17.8 0.1 1.7 1 0 0 1 1 1 1 MerR HTH family regulatory protein HTH_28 PF13518.6 gi|15922800|ref|NP_378469.1| - 0.0021 18.1 0.3 0.0062 16.6 0.0 1.9 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_29 PF13551.6 gi|15922800|ref|NP_378469.1| - 0.0076 16.3 0.0 0.016 15.2 0.0 1.6 1 0 0 1 1 1 1 Winged helix-turn helix Exc PF07825.11 gi|15922800|ref|NP_378469.1| - 0.0092 15.9 0.1 0.015 15.3 0.1 1.3 1 0 0 1 1 1 1 Excisionase-like protein Phage_AlpA PF05930.12 gi|15922800|ref|NP_378469.1| - 0.018 14.8 0.0 0.036 13.9 0.0 1.5 1 0 0 1 1 1 0 Prophage CP4-57 regulatory protein (AlpA) Helicase_C PF00271.31 gi|15922800|ref|NP_378469.1| - 0.022 15.1 0.2 2.4 8.5 0.0 2.2 1 1 1 2 2 2 0 Helicase conserved C-terminal domain HTH_psq PF05225.16 gi|15922800|ref|NP_378469.1| - 0.087 12.6 0.1 0.6 9.9 0.0 2.2 2 0 0 2 2 2 0 helix-turn-helix, Psq domain HAD_SAK_2 PF18143.1 gi|15922800|ref|NP_378469.1| - 0.11 12.8 0.0 1.7 9.0 0.0 2.1 1 1 1 2 2 2 0 HAD domain in Swiss Army Knife RNA repair proteins YcxB PF14317.6 gi|15922800|ref|NP_378469.1| - 0.12 12.0 0.0 0.27 11.0 0.0 1.6 1 0 0 1 1 1 0 YcxB-like protein OrfB_Zn_ribbon PF07282.11 gi|15922801|ref|NP_378470.1| - 2.4e-18 65.8 0.0 4.6e-18 64.9 0.0 1.5 1 0 0 1 1 1 1 Putative transposase DNA-binding domain PPR PF01535.20 gi|15922801|ref|NP_378470.1| - 0.15 12.4 2.1 29 5.2 0.0 3.4 3 0 0 3 3 3 0 PPR repeat PQQ PF01011.21 gi|15922802|ref|NP_378471.1| - 3.1e-33 112.1 11.9 5.8e-07 29.1 0.1 7.7 7 0 0 7 7 7 7 PQQ enzyme repeat PQQ_2 PF13360.6 gi|15922802|ref|NP_378471.1| - 3.5e-27 95.5 0.0 1.1e-17 64.4 0.0 3.1 1 1 1 2 2 2 2 PQQ-like domain PQQ_3 PF13570.6 gi|15922802|ref|NP_378471.1| - 2.7e-13 50.0 25.2 0.00044 20.6 0.2 8.1 9 0 0 9 9 9 4 PQQ-like domain DUF4905 PF16248.5 gi|15922802|ref|NP_378471.1| - 0.021 14.7 1.3 32 4.5 0.0 5.1 5 1 0 5 5 5 0 Domain of unknown function (DUF4905) CzcE PF16986.5 gi|15922802|ref|NP_378471.1| - 0.058 13.7 2.6 0.6 10.5 0.1 3.7 4 1 1 5 5 5 0 Heavy-metal resistance protein CzcE Metallophos_C PF14008.6 gi|15922802|ref|NP_378471.1| - 0.064 14.1 2.6 0.45 11.4 1.3 2.7 2 0 0 2 2 2 0 Iron/zinc purple acid phosphatase-like protein C ABC_tran PF00005.27 gi|15922805|ref|NP_378474.1| - 9.3e-28 97.4 0.1 2.4e-27 96.1 0.0 1.6 2 0 0 2 2 2 1 ABC transporter AAA_21 PF13304.6 gi|15922805|ref|NP_378474.1| - 1.1e-13 51.7 3.3 3e-06 27.3 0.1 2.3 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|15922805|ref|NP_378474.1| - 2.4e-06 27.9 0.0 5.1e-06 26.8 0.0 1.5 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|15922805|ref|NP_378474.1| - 5.6e-05 22.7 0.7 0.023 14.1 0.1 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|15922805|ref|NP_378474.1| - 0.00015 21.6 10.8 0.001 18.8 0.2 2.8 2 1 1 3 3 3 2 AAA ATPase domain DUF4162 PF13732.6 gi|15922805|ref|NP_378474.1| - 0.0091 16.7 0.4 0.025 15.3 0.4 1.8 1 0 0 1 1 1 1 Domain of unknown function (DUF4162) AAA_33 PF13671.6 gi|15922805|ref|NP_378474.1| - 0.014 15.5 0.0 0.029 14.5 0.0 1.5 1 1 0 1 1 1 0 AAA domain T2SSE PF00437.20 gi|15922805|ref|NP_378474.1| - 0.026 13.6 0.0 0.047 12.7 0.0 1.4 1 0 0 1 1 1 0 Type II/IV secretion system protein AAA_29 PF13555.6 gi|15922805|ref|NP_378474.1| - 0.029 14.1 0.1 0.058 13.1 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain SRP54 PF00448.22 gi|15922805|ref|NP_378474.1| - 0.036 13.7 0.0 0.078 12.6 0.0 1.5 1 0 0 1 1 1 0 SRP54-type protein, GTPase domain PBECR2 PF18810.1 gi|15922805|ref|NP_378474.1| - 0.046 14.0 0.0 0.075 13.3 0.0 1.4 1 0 0 1 1 1 0 phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease2 AAA_30 PF13604.6 gi|15922805|ref|NP_378474.1| - 0.058 13.1 0.0 0.084 12.6 0.0 1.4 1 0 0 1 1 1 0 AAA domain AAA_28 PF13521.6 gi|15922805|ref|NP_378474.1| - 0.096 12.9 0.0 0.77 10.0 0.0 2.0 2 0 0 2 2 2 0 AAA domain AAA_23 PF13476.6 gi|15922805|ref|NP_378474.1| - 0.1 13.1 11.2 1.7 9.1 11.1 2.5 1 1 0 1 1 1 0 AAA domain Rad17 PF03215.15 gi|15922805|ref|NP_378474.1| - 0.49 10.3 3.1 0.24 11.3 0.4 2.0 2 1 0 2 2 2 0 Rad17 P-loop domain DsbD_2 PF13386.6 gi|15922806|ref|NP_378475.1| - 0.0025 17.8 3.8 0.0025 17.8 3.8 2.5 1 1 2 3 3 3 1 Cytochrome C biogenesis protein transmembrane region LysE PF01810.18 gi|15922806|ref|NP_378475.1| - 0.025 14.0 6.5 0.088 12.3 6.5 2.1 1 1 0 1 1 1 0 LysE type translocator Thermopsin PF05317.11 gi|15922807|ref|NP_378476.1| - 1.1e-47 162.7 17.3 1.1e-47 162.7 17.3 6.0 3 1 3 7 7 7 3 Thermopsin AA_permease_2 PF13520.6 gi|15922808|ref|NP_378477.1| - 4.7e-43 147.6 51.6 4.7e-43 147.6 51.6 3.3 1 1 1 3 3 3 1 Amino acid permease AA_permease PF00324.21 gi|15922808|ref|NP_378477.1| - 6.2e-27 94.3 61.0 6.2e-27 94.3 61.0 2.2 1 1 2 3 3 3 1 Amino acid permease Polysacc_synt_C PF14667.6 gi|15922808|ref|NP_378477.1| - 2.6e-05 24.3 15.4 2.6e-05 24.3 15.4 5.5 2 2 3 5 5 5 1 Polysaccharide biosynthesis C-terminal domain Aldedh PF00171.22 gi|15922809|ref|NP_378478.1| - 4.1e-112 375.1 0.0 4.7e-112 374.9 0.0 1.0 1 0 0 1 1 1 1 Aldehyde dehydrogenase family LuxC PF05893.14 gi|15922809|ref|NP_378478.1| - 5.2e-06 25.8 0.0 7.4e-06 25.3 0.0 1.2 1 0 0 1 1 1 1 Acyl-CoA reductase (LuxC) PfkB PF00294.24 gi|15922810|ref|NP_378479.1| - 2.2e-44 152.0 0.0 2.5e-44 151.8 0.0 1.0 1 0 0 1 1 1 1 pfkB family carbohydrate kinase ACPS PF01648.20 gi|15922810|ref|NP_378479.1| - 0.1 12.7 0.1 0.19 11.9 0.1 1.4 1 0 0 1 1 1 0 4'-phosphopantetheinyl transferase superfamily DHDPS PF00701.22 gi|15922811|ref|NP_378480.1| - 2.7e-43 147.8 0.0 3.3e-43 147.5 0.0 1.0 1 0 0 1 1 1 1 Dihydrodipicolinate synthetase family betaPIX_CC PF16523.5 gi|15922811|ref|NP_378480.1| - 1.4 8.8 4.2 1.8 8.4 0.1 2.8 3 0 0 3 3 3 0 betaPIX coiled coil EamA PF00892.20 gi|15922812|ref|NP_378481.1| - 7e-21 74.8 41.9 1.2e-11 44.9 17.7 2.3 2 0 0 2 2 2 2 EamA-like transporter family Phage_holin_3_1 PF05106.12 gi|15922812|ref|NP_378481.1| - 2.9 8.4 8.5 0.19 12.1 0.9 2.6 2 1 1 3 3 3 0 Phage holin family (Lysis protein S) AA_permease_2 PF13520.6 gi|15922813|ref|NP_378482.1| - 3.4e-18 65.7 73.6 5.5e-18 65.0 73.6 1.3 1 1 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|15922813|ref|NP_378482.1| - 1.4e-06 27.2 63.5 1.4e-06 27.2 63.5 1.8 1 1 0 2 2 2 1 Amino acid permease DUF423 PF04241.15 gi|15922813|ref|NP_378482.1| - 2.8 8.2 25.7 1.1 9.5 1.2 5.4 3 2 2 5 5 5 0 Protein of unknown function (DUF423) Ald_Xan_dh_C2 PF02738.18 gi|15922814|ref|NP_378483.1| - 1.7e-161 538.4 0.0 2.3e-161 538.0 0.0 1.0 1 0 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 gi|15922814|ref|NP_378483.1| - 1.6e-26 92.8 0.0 5.4e-26 91.1 0.0 2.0 2 0 0 2 2 2 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain SpoIIIAH PF12685.7 gi|15922814|ref|NP_378483.1| - 0.085 12.7 1.2 0.14 12.0 0.2 1.8 2 0 0 2 2 2 0 SpoIIIAH-like protein Pyr_redox_2 PF07992.14 gi|15922815|ref|NP_378484.1| - 3.3e-24 85.6 0.0 1.5e-13 50.6 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|15922815|ref|NP_378484.1| - 1.1e-05 24.9 0.0 0.017 14.4 0.0 2.1 2 0 0 2 2 2 2 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|15922815|ref|NP_378484.1| - 0.001 19.6 0.4 0.099 13.2 0.0 2.8 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Lycopene_cycl PF05834.12 gi|15922815|ref|NP_378484.1| - 0.0018 17.4 0.0 2.8 6.9 0.0 3.0 3 0 0 3 3 3 2 Lycopene cyclase protein DAO PF01266.24 gi|15922815|ref|NP_378484.1| - 0.01 15.5 0.1 0.033 13.8 0.0 1.8 2 0 0 2 2 2 1 FAD dependent oxidoreductase Amino_oxidase PF01593.24 gi|15922815|ref|NP_378484.1| - 0.041 13.2 0.2 0.21 10.9 0.0 2.1 3 0 0 3 3 3 0 Flavin containing amine oxidoreductase DUF1641 PF07849.11 gi|15922817|ref|NP_378486.1| - 6.1e-13 48.4 0.3 6.3e-12 45.2 0.0 2.9 3 0 0 3 3 3 1 Protein of unknown function (DUF1641) DUF2286 PF10051.9 gi|15922817|ref|NP_378486.1| - 0.0013 18.4 3.6 0.12 12.1 0.0 3.0 2 1 1 3 3 3 2 Uncharacterized protein conserved in archaea (DUF2286) DUF1539 PF07560.11 gi|15922817|ref|NP_378486.1| - 0.016 15.3 4.6 0.84 9.7 0.1 3.3 2 1 0 3 3 3 0 Domain of Unknown Function (DUF1539) DED PF01335.21 gi|15922817|ref|NP_378486.1| - 0.12 12.7 10.8 13 6.2 1.2 4.3 3 1 1 4 4 4 0 Death effector domain DUF1981 PF09324.10 gi|15922817|ref|NP_378486.1| - 0.12 12.2 0.8 4.3 7.3 0.0 3.1 3 0 0 3 3 3 0 Domain of unknown function (DUF1981) COG5 PF10392.9 gi|15922817|ref|NP_378486.1| - 0.34 11.1 3.6 0.95 9.6 0.1 2.7 1 1 1 2 2 2 0 Golgi transport complex subunit 5 PAS_2 PF08446.11 gi|15922817|ref|NP_378486.1| - 0.35 11.6 2.8 3.2 8.4 0.2 3.1 1 1 2 3 3 3 0 PAS fold HIGH_NTase1_ass PF16581.5 gi|15922817|ref|NP_378486.1| - 2.9 7.8 9.3 25 4.8 0.4 3.2 1 1 2 3 3 3 0 Cytidyltransferase-related C-terminal region DUF1421 PF07223.11 gi|15922818|ref|NP_378487.1| - 0.18 11.7 1.9 0.28 11.1 0.2 2.0 2 0 0 2 2 2 0 UBA-like domain (DUF1421) Aldo_ket_red PF00248.21 gi|15922819|ref|NP_378488.1| - 8e-60 202.5 0.2 6.3e-58 196.3 0.2 2.0 1 1 0 1 1 1 1 Aldo/keto reductase family Ald_Xan_dh_C2 PF02738.18 gi|15922820|ref|NP_378489.1| - 8.8e-118 394.1 0.0 7.9e-116 387.7 0.0 2.1 1 1 0 1 1 1 1 Molybdopterin-binding domain of aldehyde dehydrogenase Ald_Xan_dh_C PF01315.22 gi|15922820|ref|NP_378489.1| - 3.4e-14 53.1 0.0 8.2e-14 51.9 0.0 1.7 1 0 0 1 1 1 1 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain Nairo_nucleo PF02477.15 gi|15922820|ref|NP_378489.1| - 0.13 11.1 0.0 0.2 10.4 0.0 1.2 1 0 0 1 1 1 0 Nucleocapsid N protein ATPase_2 PF01637.18 gi|15922821|ref|NP_378490.1| - 3.3e-20 73.0 2.2 4.2e-20 72.7 2.2 1.1 1 0 0 1 1 1 1 ATPase domain predominantly from Archaea AAA_14 PF13173.6 gi|15922821|ref|NP_378490.1| - 2.1e-08 34.3 4.1 3.7e-06 27.0 1.8 2.4 2 1 0 2 2 2 1 AAA domain AAA_22 PF13401.6 gi|15922821|ref|NP_378490.1| - 1.5e-06 28.5 0.0 2.8e-06 27.7 0.0 1.4 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|15922821|ref|NP_378490.1| - 0.0001 22.8 0.0 0.00015 22.2 0.0 1.3 1 0 0 1 1 1 1 AAA ATPase domain AAA PF00004.29 gi|15922821|ref|NP_378490.1| - 0.00013 22.4 0.1 0.00073 20.0 0.1 2.0 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) AAA_35 PF14516.6 gi|15922821|ref|NP_378490.1| - 0.011 14.6 0.0 0.59 8.9 0.0 2.1 2 0 0 2 2 2 0 AAA-like domain Sda PF08970.10 gi|15922821|ref|NP_378490.1| - 0.046 13.5 0.1 0.11 12.2 0.1 1.6 1 0 0 1 1 1 0 Sporulation inhibitor A Pro-kuma_activ PF09286.11 gi|15922823|ref|NP_378492.1| - 1.6e-23 83.5 0.6 4e-23 82.3 0.6 1.7 1 0 0 1 1 1 1 Pro-kumamolisin, activation domain Big_7 PF17957.1 gi|15922823|ref|NP_378492.1| - 1.3e-10 41.9 5.6 1.3e-10 41.9 5.6 4.8 4 0 0 4 4 4 1 Bacterial Ig domain Peptidase_S8 PF00082.22 gi|15922823|ref|NP_378492.1| - 2.7e-07 30.2 1.1 2.7e-07 30.2 1.1 1.6 2 0 0 2 2 2 1 Subtilase family TcfC PF16967.5 gi|15922823|ref|NP_378492.1| - 1.3e-05 24.6 0.3 1.3e-05 24.6 0.3 2.5 2 0 0 2 2 2 1 E-set like domain ChitinaseA_N PF08329.10 gi|15922823|ref|NP_378492.1| - 0.051 13.2 0.1 0.12 12.0 0.1 1.6 1 0 0 1 1 1 0 Chitinase A, N-terminal domain SH3_14 PF18343.1 gi|15922823|ref|NP_378492.1| - 0.066 13.3 0.6 0.23 11.6 0.0 2.1 2 0 0 2 2 2 0 Dda helicase SH3 domain HEPN PF05168.14 gi|15922824|ref|NP_378493.1| - 3.4e-34 117.5 0.7 4.1e-34 117.2 0.7 1.1 1 0 0 1 1 1 1 HEPN domain FAM195 PF14799.6 gi|15922824|ref|NP_378493.1| - 0.0085 16.4 1.2 0.013 15.8 1.2 1.4 1 0 0 1 1 1 1 FAM195 family SNARE_assoc PF09335.11 gi|15922825|ref|NP_378494.1| - 1e-19 71.2 7.0 1e-19 71.2 7.0 1.9 2 0 0 2 2 2 1 SNARE associated Golgi protein Resolvase PF00239.21 gi|15922826|ref|NP_378495.1| - 7.3e-26 91.0 0.4 9.6e-26 90.6 0.4 1.1 1 0 0 1 1 1 1 Resolvase, N terminal domain HTH_17 PF12728.7 gi|15922826|ref|NP_378495.1| - 2e-15 56.7 2.1 1.1e-14 54.4 0.1 2.6 3 0 0 3 3 3 1 Helix-turn-helix domain DUF1323 PF07037.11 gi|15922826|ref|NP_378495.1| - 0.0012 19.2 0.1 0.0035 17.7 0.1 1.9 1 1 0 1 1 1 1 Putative transcription regulator (DUF1323) MerR PF00376.23 gi|15922826|ref|NP_378495.1| - 0.0045 16.7 0.0 0.0096 15.7 0.0 1.6 1 0 0 1 1 1 1 MerR family regulatory protein CLP1_P PF16575.5 gi|15922826|ref|NP_378495.1| - 0.022 14.6 0.0 0.029 14.2 0.0 1.3 1 0 0 1 1 1 0 mRNA cleavage and polyadenylation factor CLP1 P-loop TFIID_20kDa PF03847.13 gi|15922826|ref|NP_378495.1| - 0.027 15.0 0.2 0.069 13.7 0.1 1.8 2 0 0 2 2 1 0 Transcription initiation factor TFIID subunit A HTH_3 PF01381.22 gi|15922826|ref|NP_378495.1| - 0.061 13.4 0.2 0.63 10.1 0.0 2.5 3 0 0 3 3 3 0 Helix-turn-helix MerR_1 PF13411.6 gi|15922826|ref|NP_378495.1| - 0.076 13.1 0.0 0.2 11.8 0.0 1.8 1 0 0 1 1 1 0 MerR HTH family regulatory protein HTH_29 PF13551.6 gi|15922826|ref|NP_378495.1| - 0.087 12.9 0.1 0.32 11.0 0.0 2.0 2 0 0 2 2 2 0 Winged helix-turn helix HTH_37 PF13744.6 gi|15922826|ref|NP_378495.1| - 0.13 12.3 0.0 4.2 7.4 0.0 2.6 2 0 0 2 2 2 0 Helix-turn-helix domain Vwaint PF14624.6 gi|15922826|ref|NP_378495.1| - 0.14 12.3 0.0 0.21 11.7 0.0 1.3 1 0 0 1 1 1 0 VWA / Hh protein intein-like CHIPS PF11434.8 gi|15922827|ref|NP_378496.1| - 0.03 14.2 0.2 0.16 11.8 0.0 2.2 3 0 0 3 3 3 0 Chemotaxis-inhibiting protein CHIPS OrfB_Zn_ribbon PF07282.11 gi|15922828|ref|NP_378497.1| - 0.05 13.5 0.1 0.49 10.3 0.0 2.5 3 0 0 3 3 3 0 Putative transposase DNA-binding domain Phage_integrase PF00589.22 gi|15922829|ref|NP_378498.1| - 5.9e-15 55.5 0.1 6.2e-14 52.2 0.0 2.2 2 0 0 2 2 2 1 Phage integrase family Phage_integr_3 PF16795.5 gi|15922829|ref|NP_378498.1| - 3.8e-06 26.9 4.5 2.6e-05 24.2 0.4 3.2 3 2 0 3 3 3 1 Archaeal phage integrase HTH_3 PF01381.22 gi|15922829|ref|NP_378498.1| - 6.2e-06 26.2 1.2 1.7e-05 24.8 0.1 2.4 3 0 0 3 3 3 1 Helix-turn-helix HTH_26 PF13443.6 gi|15922829|ref|NP_378498.1| - 0.00072 19.9 0.0 0.0028 18.0 0.0 2.1 1 0 0 1 1 1 1 Cro/C1-type HTH DNA-binding domain HTH_19 PF12844.7 gi|15922829|ref|NP_378498.1| - 0.0058 16.6 0.6 0.018 15.0 0.2 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain Sigma54_DBD PF04552.13 gi|15922829|ref|NP_378498.1| - 0.01 15.5 1.7 0.19 11.5 0.0 3.2 4 1 0 4 4 4 0 Sigma-54, DNA binding domain HTH_31 PF13560.6 gi|15922829|ref|NP_378498.1| - 0.055 13.8 0.0 0.16 12.3 0.0 1.7 1 0 0 1 1 1 0 Helix-turn-helix domain HTH_38 PF13936.6 gi|15922829|ref|NP_378498.1| - 0.079 12.7 0.3 0.29 10.9 0.0 2.2 2 0 0 2 2 2 0 Helix-turn-helix domain DUF2540 PF10802.8 gi|15922831|ref|NP_378500.1| - 0.054 13.6 0.2 2 8.6 0.1 2.2 2 0 0 2 2 2 0 Protein of unknown function (DUF2540) FAD_SOX PF18371.1 gi|15922831|ref|NP_378500.1| - 0.1 13.0 1.0 0.18 12.2 0.8 1.7 1 1 1 2 2 2 0 Flavin adenine dinucleotide (FAD)-dependent sulfhydryl oxidase HTH_54 PF18607.1 gi|15922831|ref|NP_378500.1| - 0.19 11.8 3.1 0.69 10.0 0.1 2.3 2 1 0 2 2 2 0 ParA helix turn helix domain THDPS_N_2 PF14805.6 gi|15922832|ref|NP_378501.1| - 0.012 15.8 0.2 0.015 15.5 0.2 1.1 1 0 0 1 1 1 0 Tetrahydrodipicolinate N-succinyltransferase N-terminal RHH_1 PF01402.21 gi|15922833|ref|NP_378502.1| - 1e-10 41.1 0.2 1.4e-10 40.7 0.2 1.2 1 0 0 1 1 1 1 Ribbon-helix-helix protein, copG family RepB-RCR_reg PF10723.9 gi|15922833|ref|NP_378502.1| - 0.071 13.1 0.1 0.079 12.9 0.1 1.1 1 0 0 1 1 1 0 Replication regulatory protein RepB PDDEXK_1 PF12705.7 gi|15922834|ref|NP_378503.1| - 4.1e-10 40.0 0.2 2.2e-09 37.6 0.1 2.0 1 1 0 1 1 1 1 PD-(D/E)XK nuclease superfamily Cas_Cas4 PF01930.17 gi|15922834|ref|NP_378503.1| - 2.2e-05 24.7 0.2 8.4e-05 22.7 0.2 1.8 1 1 0 1 1 1 1 Domain of unknown function DUF83 Dna2 PF08696.11 gi|15922834|ref|NP_378503.1| - 0.052 13.3 0.0 0.079 12.8 0.0 1.3 1 0 0 1 1 1 0 DNA replication factor Dna2 DUF5601 PF18151.1 gi|15922834|ref|NP_378503.1| - 0.055 13.8 0.1 0.17 12.2 0.1 1.8 1 0 0 1 1 1 0 Domain of unknown function (DUF5601) Exo5 PF09810.9 gi|15922834|ref|NP_378503.1| - 0.089 12.3 3.1 8.8 5.7 0.0 2.8 2 1 1 3 3 3 0 Exonuclease V - a 5' deoxyribonuclease PulG PF11773.8 gi|15922835|ref|NP_378504.1| - 0.14 12.0 0.2 1.5 8.7 0.0 2.2 2 0 0 2 2 2 0 Type II secretory pathway pseudopilin Rhodopsin_N PF10413.9 gi|15922836|ref|NP_378505.1| - 0.014 15.2 0.8 0.023 14.5 0.8 1.4 1 0 0 1 1 1 0 Amino terminal of the G-protein receptor rhodopsin DUF3834 PF12916.7 gi|15922839|ref|NP_378508.1| - 8.8e-75 250.4 0.2 1e-74 250.2 0.2 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF3834) Creatininase PF02633.14 gi|15922840|ref|NP_378509.1| - 4.5e-44 150.7 0.0 5.5e-44 150.4 0.0 1.0 1 0 0 1 1 1 1 Creatinine amidohydrolase DUF2487 PF10673.9 gi|15922840|ref|NP_378509.1| - 0.059 13.4 0.0 0.14 12.2 0.0 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2487) DUF5113 PF17140.4 gi|15922840|ref|NP_378509.1| - 0.081 12.7 0.0 0.12 12.2 0.0 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF5113) YTV PF07639.11 gi|15922840|ref|NP_378509.1| - 0.15 12.2 0.0 0.24 11.5 0.0 1.3 1 0 0 1 1 1 0 YTV HTH_45 PF14947.6 gi|15922841|ref|NP_378510.1| - 2.1e-07 30.8 0.5 2.6e-07 30.5 0.5 1.2 1 1 0 1 1 1 1 Winged helix-turn-helix HTH_34 PF13601.6 gi|15922841|ref|NP_378510.1| - 3.7e-05 23.8 0.1 7.3e-05 22.9 0.1 1.5 1 1 0 1 1 1 1 Winged helix DNA-binding domain HTH_12 PF08461.10 gi|15922841|ref|NP_378510.1| - 7.2e-05 22.7 0.3 0.00011 22.1 0.3 1.3 1 1 0 1 1 1 1 Ribonuclease R winged-helix domain HTH_11 PF08279.12 gi|15922841|ref|NP_378510.1| - 7.3e-05 22.6 0.4 9.4e-05 22.3 0.4 1.1 1 0 0 1 1 1 1 HTH domain RuvB_C PF05491.13 gi|15922841|ref|NP_378510.1| - 0.00022 21.0 0.5 0.00027 20.7 0.5 1.1 1 0 0 1 1 1 1 RuvB C-terminal winged helix domain Rrf2 PF02082.20 gi|15922841|ref|NP_378510.1| - 0.00029 21.1 0.0 0.00034 20.9 0.0 1.1 1 0 0 1 1 1 1 Transcriptional regulator HTH_27 PF13463.6 gi|15922841|ref|NP_378510.1| - 0.00061 20.2 0.0 0.00067 20.1 0.0 1.1 1 0 0 1 1 1 1 Winged helix DNA-binding domain CvfB_WH PF17783.1 gi|15922841|ref|NP_378510.1| - 0.0009 19.0 0.3 0.0013 18.5 0.3 1.4 1 1 0 1 1 1 1 CvfB-like winged helix domain HTH_24 PF13412.6 gi|15922841|ref|NP_378510.1| - 0.00099 18.6 1.3 0.0013 18.2 1.3 1.2 1 0 0 1 1 1 1 Winged helix-turn-helix DNA-binding DUF1803 PF08820.10 gi|15922841|ref|NP_378510.1| - 0.0011 18.9 0.2 0.0012 18.8 0.2 1.1 1 0 0 1 1 1 1 Domain of unknown function (DUF1803) MarR_2 PF12802.7 gi|15922841|ref|NP_378510.1| - 0.0025 17.7 0.0 0.003 17.4 0.0 1.1 1 0 0 1 1 1 1 MarR family FaeA PF04703.12 gi|15922841|ref|NP_378510.1| - 0.0027 18.0 0.0 0.0033 17.8 0.0 1.1 1 0 0 1 1 1 1 FaeA-like protein HemN_C PF06969.16 gi|15922841|ref|NP_378510.1| - 0.0033 17.5 0.0 0.0046 17.0 0.0 1.1 1 0 0 1 1 1 1 HemN C-terminal domain HTH_DeoR PF08220.12 gi|15922841|ref|NP_378510.1| - 0.0044 16.7 0.0 0.0057 16.4 0.0 1.2 1 0 0 1 1 1 1 DeoR-like helix-turn-helix domain TrmB PF01978.19 gi|15922841|ref|NP_378510.1| - 0.0045 16.9 0.1 0.0046 16.8 0.1 1.2 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB HxlR PF01638.17 gi|15922841|ref|NP_378510.1| - 0.006 16.4 0.2 0.014 15.3 0.2 1.6 1 1 0 1 1 1 1 HxlR-like helix-turn-helix Mrr_N PF14338.6 gi|15922841|ref|NP_378510.1| - 0.0066 16.6 0.4 0.026 14.6 0.2 1.8 1 1 1 2 2 2 1 Mrr N-terminal domain DUF4423 PF14394.6 gi|15922841|ref|NP_378510.1| - 0.014 15.1 0.2 0.015 15.0 0.2 1.2 1 0 0 1 1 1 0 Domain of unknown function (DUF4423) HTH_Crp_2 PF13545.6 gi|15922841|ref|NP_378510.1| - 0.017 15.1 0.1 0.021 14.8 0.1 1.4 1 1 0 1 1 1 0 Crp-like helix-turn-helix domain TBPIP PF07106.13 gi|15922841|ref|NP_378510.1| - 0.017 15.0 0.5 0.023 14.6 0.5 1.4 1 1 0 1 1 1 0 TBPIP/Hop2 winged helix domain ANAPC2 PF08672.11 gi|15922841|ref|NP_378510.1| - 0.019 15.5 0.1 0.021 15.3 0.1 1.3 1 1 0 1 1 1 0 Anaphase promoting complex (APC) subunit 2 DUF505 PF04458.12 gi|15922841|ref|NP_378510.1| - 0.019 13.3 0.1 0.019 13.3 0.1 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF505) PCI PF01399.27 gi|15922841|ref|NP_378510.1| - 0.02 15.4 0.2 0.026 15.0 0.2 1.1 1 0 0 1 1 1 0 PCI domain DUF4364 PF14277.6 gi|15922841|ref|NP_378510.1| - 0.022 14.5 0.1 0.03 14.1 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4364) MarR PF01047.22 gi|15922841|ref|NP_378510.1| - 0.032 14.1 0.1 0.038 13.9 0.1 1.2 1 0 0 1 1 1 0 MarR family Cullin PF00888.22 gi|15922841|ref|NP_378510.1| - 0.035 12.7 0.2 0.036 12.7 0.2 1.0 1 0 0 1 1 1 0 Cullin family FeoC PF09012.10 gi|15922841|ref|NP_378510.1| - 0.041 13.9 0.0 0.045 13.8 0.0 1.2 1 0 0 1 1 1 0 FeoC like transcriptional regulator Phage_rep_O PF04492.13 gi|15922841|ref|NP_378510.1| - 0.042 14.4 0.1 0.045 14.3 0.1 1.3 1 1 0 1 1 1 0 Bacteriophage replication protein O RPA_C PF08784.11 gi|15922841|ref|NP_378510.1| - 0.044 14.4 0.0 0.058 14.1 0.0 1.1 1 0 0 1 1 1 0 Replication protein A C terminal HTH_5 PF01022.20 gi|15922841|ref|NP_378510.1| - 0.048 13.5 0.1 0.061 13.2 0.1 1.2 1 0 0 1 1 1 0 Bacterial regulatory protein, arsR family PadR PF03551.14 gi|15922841|ref|NP_378510.1| - 0.056 13.4 0.2 0.11 12.5 0.2 1.6 1 1 0 1 1 1 0 Transcriptional regulator PadR-like family RNA_pol_Rpc34 PF05158.12 gi|15922841|ref|NP_378510.1| - 0.061 12.7 0.2 0.061 12.7 0.2 1.0 1 0 0 1 1 1 0 RNA polymerase Rpc34 subunit HTH_20 PF12840.7 gi|15922841|ref|NP_378510.1| - 0.065 13.3 0.0 0.076 13.1 0.0 1.2 1 0 0 1 1 1 0 Helix-turn-helix domain Isochorismatase PF00857.20 gi|15922842|ref|NP_378511.1| - 1.4e-34 119.8 0.0 1.6e-34 119.6 0.0 1.0 1 0 0 1 1 1 1 Isochorismatase family ABC_tran PF00005.27 gi|15922843|ref|NP_378512.1| - 1.6e-26 93.4 0.0 2.2e-26 93.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter AAA_21 PF13304.6 gi|15922843|ref|NP_378512.1| - 2.9e-14 53.6 0.8 1.7e-06 28.1 0.1 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_29 PF13555.6 gi|15922843|ref|NP_378512.1| - 0.00066 19.4 0.0 0.0013 18.4 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|15922843|ref|NP_378512.1| - 0.0027 18.2 0.0 0.0036 17.8 0.0 1.2 1 0 0 1 1 1 1 AAA domain SMC_N PF02463.19 gi|15922843|ref|NP_378512.1| - 0.0035 16.8 0.3 2 7.8 0.0 2.2 1 1 1 2 2 2 2 RecF/RecN/SMC N terminal domain AAA_15 PF13175.6 gi|15922843|ref|NP_378512.1| - 0.019 14.7 0.1 0.15 11.8 0.0 1.9 1 1 0 2 2 2 0 AAA ATPase domain Rad17 PF03215.15 gi|15922843|ref|NP_378512.1| - 0.056 13.4 0.1 0.13 12.2 0.0 1.5 2 0 0 2 2 2 0 Rad17 P-loop domain AAA_27 PF13514.6 gi|15922843|ref|NP_378512.1| - 0.11 12.1 0.0 0.16 11.6 0.0 1.2 1 0 0 1 1 1 0 AAA domain AAA_30 PF13604.6 gi|15922843|ref|NP_378512.1| - 0.11 12.2 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 AAA domain DLH PF01738.18 gi|15922845|ref|NP_378514.1| - 7.6e-72 241.4 0.0 1.4e-71 240.5 0.0 1.4 1 1 0 1 1 1 1 Dienelactone hydrolase family Hydrolase_4 PF12146.8 gi|15922845|ref|NP_378514.1| - 6.9e-08 32.0 0.0 0.0053 16.1 0.0 2.7 3 0 0 3 3 3 2 Serine aminopeptidase, S33 Abhydrolase_2 PF02230.16 gi|15922845|ref|NP_378514.1| - 0.00038 20.3 0.0 0.00076 19.4 0.0 1.4 2 0 0 2 2 2 1 Phospholipase/Carboxylesterase Abhydrolase_5 PF12695.7 gi|15922845|ref|NP_378514.1| - 0.0023 17.7 0.0 0.0086 15.9 0.0 1.8 1 1 1 2 2 2 1 Alpha/beta hydrolase family Peptidase_S9 PF00326.21 gi|15922845|ref|NP_378514.1| - 0.0028 17.2 0.0 0.48 9.9 0.0 2.2 2 0 0 2 2 2 2 Prolyl oligopeptidase family Abhydrolase_1 PF00561.20 gi|15922845|ref|NP_378514.1| - 0.021 14.5 0.1 0.062 12.9 0.1 1.6 1 1 1 2 2 2 0 alpha/beta hydrolase fold BAAT_C PF08840.11 gi|15922845|ref|NP_378514.1| - 0.027 14.4 0.1 7.5 6.4 0.0 2.7 2 1 0 2 2 2 0 BAAT / Acyl-CoA thioester hydrolase C terminal DUF3581 PF12119.8 gi|15922845|ref|NP_378514.1| - 0.083 12.3 0.0 0.13 11.7 0.0 1.3 1 0 0 1 1 1 0 Protein of unknown function (DUF3581) POTRA PF07244.15 gi|15922845|ref|NP_378514.1| - 0.19 12.3 1.3 13 6.5 0.1 3.2 2 1 2 4 4 4 0 Surface antigen variable number repeat RHH_1 PF01402.21 gi|15922846|ref|NP_378515.1| - 9.7e-11 41.2 0.0 4.8e-10 39.0 0.0 1.9 2 0 0 2 2 2 1 Ribbon-helix-helix protein, copG family RHH_8 PF17723.1 gi|15922846|ref|NP_378515.1| - 0.00071 19.7 0.2 0.00084 19.5 0.2 1.2 1 0 0 1 1 1 1 Ribbon-Helix-Helix transcriptional regulator family CbiA PF01656.23 gi|15922847|ref|NP_378516.1| - 5.8e-08 32.9 0.0 9.9e-08 32.1 0.0 1.4 1 1 0 1 1 1 1 CobQ/CobB/MinD/ParA nucleotide binding domain ArsA_ATPase PF02374.15 gi|15922847|ref|NP_378516.1| - 1.9e-05 24.0 0.4 0.015 14.5 0.1 2.8 2 1 1 3 3 3 2 Anion-transporting ATPase AAA_31 PF13614.6 gi|15922847|ref|NP_378516.1| - 2.5e-05 24.3 0.3 9.3e-05 22.4 0.1 2.0 1 1 1 2 2 2 1 AAA domain ParA PF10609.9 gi|15922847|ref|NP_378516.1| - 4.9e-05 22.9 0.0 8.6e-05 22.1 0.0 1.4 1 0 0 1 1 1 1 NUBPL iron-transfer P-loop NTPase CBP_BcsQ PF06564.12 gi|15922847|ref|NP_378516.1| - 0.0036 16.8 0.0 0.009 15.5 0.0 1.7 1 1 1 2 2 2 1 Cellulose biosynthesis protein BcsQ DUF4083 PF13314.6 gi|15922848|ref|NP_378517.1| - 0.22 11.5 0.0 0.22 11.5 0.0 2.3 3 0 0 3 3 3 0 Domain of unknown function (DUF4083) HTH_24 PF13412.6 gi|15922849|ref|NP_378518.1| - 4.3e-12 45.4 0.3 2.4e-07 30.2 0.1 2.8 3 0 0 3 3 3 2 Winged helix-turn-helix DNA-binding HTH_45 PF14947.6 gi|15922849|ref|NP_378518.1| - 1.2e-08 34.7 7.1 4e-06 26.7 0.4 2.7 2 1 0 2 2 2 2 Winged helix-turn-helix MarR_2 PF12802.7 gi|15922849|ref|NP_378518.1| - 1.3e-07 31.3 0.0 4.2e-05 23.3 0.0 2.4 2 0 0 2 2 2 1 MarR family TrmB PF01978.19 gi|15922849|ref|NP_378518.1| - 2.5e-07 30.5 0.1 3.3e-05 23.7 0.0 2.4 2 0 0 2 2 2 1 Sugar-specific transcriptional regulator TrmB HTH_11 PF08279.12 gi|15922849|ref|NP_378518.1| - 5.8e-06 26.2 0.6 0.008 16.1 0.1 2.8 2 1 0 2 2 2 2 HTH domain MarR PF01047.22 gi|15922849|ref|NP_378518.1| - 2.5e-05 24.1 0.1 0.00014 21.7 0.0 2.2 2 1 1 3 3 3 1 MarR family HTH_28 PF13518.6 gi|15922849|ref|NP_378518.1| - 0.00013 22.0 0.0 0.35 11.0 0.0 2.2 2 0 0 2 2 2 2 Helix-turn-helix domain UPF0122 PF04297.14 gi|15922849|ref|NP_378518.1| - 0.00021 21.5 1.6 0.00022 21.4 0.4 1.6 2 0 0 2 2 1 1 Putative helix-turn-helix protein, YlxM / p13 like HTH_23 PF13384.6 gi|15922849|ref|NP_378518.1| - 0.00035 20.3 0.0 0.0032 17.2 0.0 2.1 2 0 0 2 2 2 1 Homeodomain-like domain HTH_27 PF13463.6 gi|15922849|ref|NP_378518.1| - 0.00063 20.2 0.0 0.0021 18.5 0.0 1.9 2 0 0 2 2 2 1 Winged helix DNA-binding domain HxlR PF01638.17 gi|15922849|ref|NP_378518.1| - 0.00064 19.5 0.1 0.057 13.3 0.0 2.4 2 0 0 2 2 2 1 HxlR-like helix-turn-helix HTH_20 PF12840.7 gi|15922849|ref|NP_378518.1| - 0.00069 19.6 0.0 0.0097 15.9 0.0 2.2 2 0 0 2 2 2 1 Helix-turn-helix domain HTH_5 PF01022.20 gi|15922849|ref|NP_378518.1| - 0.00098 19.0 0.0 0.0044 16.8 0.0 2.1 2 0 0 2 2 2 1 Bacterial regulatory protein, arsR family HTH_AsnC-type PF13404.6 gi|15922849|ref|NP_378518.1| - 0.002 17.9 0.0 0.099 12.5 0.0 2.3 2 0 0 2 2 2 1 AsnC-type helix-turn-helix domain HTH_29 PF13551.6 gi|15922849|ref|NP_378518.1| - 0.0027 17.7 0.0 0.97 9.5 0.0 2.2 2 0 0 2 2 2 1 Winged helix-turn helix HTH_Mga PF08280.11 gi|15922849|ref|NP_378518.1| - 0.0034 17.4 0.1 1.3 9.2 0.0 2.7 2 0 0 2 2 2 1 M protein trans-acting positive regulator (MGA) HTH domain B-block_TFIIIC PF04182.12 gi|15922849|ref|NP_378518.1| - 0.011 15.9 0.9 0.027 14.6 0.1 2.1 2 1 0 2 2 2 0 B-block binding subunit of TFIIIC GntR PF00392.21 gi|15922849|ref|NP_378518.1| - 0.013 15.2 0.1 0.51 10.0 0.0 2.3 2 0 0 2 2 2 0 Bacterial regulatory proteins, gntR family Rrf2 PF02082.20 gi|15922849|ref|NP_378518.1| - 0.013 15.8 0.1 0.11 12.8 0.0 2.4 2 0 0 2 2 2 0 Transcriptional regulator HTH_17 PF12728.7 gi|15922849|ref|NP_378518.1| - 0.013 15.6 0.2 0.15 12.3 0.0 2.4 2 0 0 2 2 2 0 Helix-turn-helix domain RepL PF05732.11 gi|15922849|ref|NP_378518.1| - 0.019 14.4 0.7 5.1 6.5 0.0 2.2 1 1 1 2 2 2 0 Firmicute plasmid replication protein (RepL) Rio2_N PF09202.11 gi|15922849|ref|NP_378518.1| - 0.019 15.2 0.1 1.3 9.3 0.0 2.3 2 0 0 2 2 2 0 Rio2, N-terminal HTH_10 PF04967.12 gi|15922849|ref|NP_378518.1| - 0.033 14.0 0.1 1.4 8.7 0.0 2.4 2 0 0 2 2 2 0 HTH DNA binding domain MerR_1 PF13411.6 gi|15922849|ref|NP_378518.1| - 0.055 13.6 0.0 0.16 12.1 0.0 1.8 2 0 0 2 2 1 0 MerR HTH family regulatory protein HTH_DeoR PF08220.12 gi|15922849|ref|NP_378518.1| - 0.077 12.7 0.0 4.8 7.0 0.0 2.5 2 0 0 2 2 2 0 DeoR-like helix-turn-helix domain FeoC PF09012.10 gi|15922849|ref|NP_378518.1| - 0.079 13.0 0.0 5.2 7.2 0.0 2.2 2 0 0 2 2 2 0 FeoC like transcriptional regulator FaeA PF04703.12 gi|15922849|ref|NP_378518.1| - 0.082 13.3 0.0 4.3 7.8 0.0 2.6 2 0 0 2 2 2 0 FaeA-like protein MerR PF00376.23 gi|15922849|ref|NP_378518.1| - 0.084 12.7 0.1 0.22 11.3 0.0 1.7 2 0 0 2 2 1 0 MerR family regulatory protein HTH_7 PF02796.15 gi|15922849|ref|NP_378518.1| - 0.085 13.0 0.2 11 6.2 0.0 2.5 2 0 0 2 2 2 0 Helix-turn-helix domain of resolvase Fe_dep_repress PF01325.19 gi|15922849|ref|NP_378518.1| - 0.092 13.0 0.6 2.9 8.2 0.1 2.8 2 1 1 3 3 3 0 Iron dependent repressor, N-terminal DNA binding domain HTH_47 PF16221.5 gi|15922849|ref|NP_378518.1| - 0.15 11.7 0.0 0.43 10.2 0.0 1.8 2 0 0 2 2 2 0 winged helix-turn-helix Phage_pRha PF09669.10 gi|15922849|ref|NP_378518.1| - 0.21 12.1 0.7 0.45 11.1 0.2 1.9 2 1 0 2 2 1 0 Phage regulatory protein Rha (Phage_pRha) Mlo PF03094.15 gi|15922851|ref|NP_378520.1| - 0.057 11.8 6.2 0.11 10.9 6.2 1.4 1 0 0 1 1 1 0 Mlo family Arch_flagellin PF01917.16 gi|15922853|ref|NP_378522.1| - 3.1e-18 66.5 5.9 8.9e-18 65.0 4.8 2.0 2 0 0 2 2 2 1 Archaebacterial flagellin Spore-coat_CotZ PF10612.9 gi|15922854|ref|NP_378523.1| - 0.07 13.3 0.0 0.087 13.0 0.0 1.2 1 0 0 1 1 1 0 Spore coat protein Z DUF2533 PF10752.9 gi|15922854|ref|NP_378523.1| - 0.1 13.1 0.2 0.23 11.9 0.2 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF2533) Dimerisation2 PF16864.5 gi|15922854|ref|NP_378523.1| - 0.11 12.5 0.0 0.25 11.3 0.0 1.6 1 0 0 1 1 1 0 Dimerisation domain Arch_flagellin PF01917.16 gi|15922855|ref|NP_378524.1| - 7.5e-12 45.7 3.5 9e-12 45.5 3.5 1.0 1 0 0 1 1 1 1 Archaebacterial flagellin Proteasome_A_N PF10584.9 gi|15922855|ref|NP_378524.1| - 0.035 13.8 0.7 15 5.4 0.4 3.1 3 0 0 3 3 3 0 Proteasome subunit A N-terminal signature SpaA PF17802.1 gi|15922855|ref|NP_378524.1| - 0.18 12.2 2.6 0.83 10.0 2.6 1.9 1 1 0 1 1 1 0 Prealbumin-like fold domain LapA_dom PF06305.11 gi|15922855|ref|NP_378524.1| - 0.19 11.6 1.0 0.38 10.6 1.0 1.4 1 0 0 1 1 1 0 Lipopolysaccharide assembly protein A domain Wzz PF02706.15 gi|15922856|ref|NP_378525.1| - 0.24 11.7 0.3 0.24 11.7 0.3 2.8 1 1 1 2 2 2 0 Chain length determinant protein ATPase PF06745.13 gi|15922857|ref|NP_378526.1| - 2.2e-15 56.7 0.6 2.7e-15 56.4 0.6 1.0 1 0 0 1 1 1 1 KaiC PAXNEB PF05625.11 gi|15922857|ref|NP_378526.1| - 0.00042 19.6 0.4 0.37 9.9 0.0 2.1 2 0 0 2 2 2 2 PAXNEB protein DnaB_C PF03796.15 gi|15922857|ref|NP_378526.1| - 0.00049 19.5 0.1 0.0055 16.1 0.0 2.0 2 0 0 2 2 2 1 DnaB-like helicase C terminal domain AAA_5 PF07728.14 gi|15922857|ref|NP_378526.1| - 0.0015 18.5 0.0 0.0028 17.6 0.0 1.4 1 0 0 1 1 1 1 AAA domain (dynein-related subfamily) DUF2075 PF09848.9 gi|15922857|ref|NP_378526.1| - 0.0022 17.3 0.2 0.0032 16.8 0.2 1.5 1 1 0 1 1 1 1 Uncharacterized conserved protein (DUF2075) AAA_24 PF13479.6 gi|15922857|ref|NP_378526.1| - 0.0026 17.5 0.2 0.0052 16.5 0.1 1.6 2 0 0 2 2 2 1 AAA domain Rad51 PF08423.11 gi|15922857|ref|NP_378526.1| - 0.0047 16.2 0.2 0.016 14.5 0.2 1.9 1 1 0 1 1 1 1 Rad51 AAA_25 PF13481.6 gi|15922857|ref|NP_378526.1| - 0.0062 16.1 0.0 0.022 14.3 0.0 1.8 1 1 0 1 1 1 1 AAA domain NACHT PF05729.12 gi|15922857|ref|NP_378526.1| - 0.013 15.4 1.1 0.047 13.6 1.1 1.9 1 1 0 1 1 1 0 NACHT domain RNA_helicase PF00910.22 gi|15922857|ref|NP_378526.1| - 0.022 15.2 0.0 0.04 14.3 0.0 1.4 1 0 0 1 1 1 0 RNA helicase AAA_16 PF13191.6 gi|15922857|ref|NP_378526.1| - 0.044 14.2 0.0 0.089 13.2 0.0 1.6 1 1 0 1 1 1 0 AAA ATPase domain Sigma54_activat PF00158.26 gi|15922857|ref|NP_378526.1| - 0.048 13.4 0.0 0.098 12.4 0.0 1.5 1 0 0 1 1 1 0 Sigma-54 interaction domain AAA_10 PF12846.7 gi|15922857|ref|NP_378526.1| - 0.065 12.2 0.3 0.091 11.7 0.3 1.3 1 1 0 1 1 1 0 AAA-like domain Elong_Iki1 PF10483.9 gi|15922857|ref|NP_378526.1| - 0.065 12.7 0.1 0.075 12.5 0.1 1.1 1 0 0 1 1 1 0 Elongator subunit Iki1 AAA PF00004.29 gi|15922857|ref|NP_378526.1| - 0.12 12.8 0.6 0.28 11.6 0.6 1.6 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|15922857|ref|NP_378526.1| - 0.18 12.1 0.3 0.54 10.5 0.3 1.8 1 1 0 1 1 1 0 AAA domain T2SSE PF00437.20 gi|15922858|ref|NP_378527.1| - 7.3e-47 159.7 0.0 1.1e-46 159.2 0.0 1.2 1 0 0 1 1 1 1 Type II/IV secretion system protein AAA_15 PF13175.6 gi|15922858|ref|NP_378527.1| - 0.0011 18.8 1.3 0.26 11.0 0.0 2.3 2 0 0 2 2 2 2 AAA ATPase domain ABC_tran PF00005.27 gi|15922858|ref|NP_378527.1| - 0.003 18.1 0.0 0.045 14.3 0.0 2.5 3 0 0 3 3 3 1 ABC transporter AAA_29 PF13555.6 gi|15922858|ref|NP_378527.1| - 0.014 15.2 0.0 0.029 14.1 0.0 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA_23 PF13476.6 gi|15922858|ref|NP_378527.1| - 0.034 14.7 3.0 0.043 14.3 0.2 2.2 2 0 0 2 2 2 0 AAA domain FtsK_SpoIIIE PF01580.18 gi|15922858|ref|NP_378527.1| - 0.06 12.7 0.0 0.093 12.1 0.0 1.3 1 0 0 1 1 1 0 FtsK/SpoIIIE family AAA_22 PF13401.6 gi|15922858|ref|NP_378527.1| - 0.15 12.3 0.0 0.31 11.3 0.0 1.5 1 0 0 1 1 1 0 AAA domain DEAD PF00270.29 gi|15922858|ref|NP_378527.1| - 0.17 11.6 0.0 0.33 10.7 0.0 1.4 1 0 0 1 1 1 0 DEAD/DEAH box helicase T2SSF PF00482.23 gi|15922859|ref|NP_378528.1| - 3.8e-13 49.5 11.1 2.5e-07 30.7 0.0 3.5 3 0 0 3 3 3 2 Type II secretion system (T2SS), protein F Chordopox_A30L PF06015.12 gi|15922859|ref|NP_378528.1| - 0.17 11.7 0.8 0.46 10.3 0.1 2.2 2 0 0 2 2 2 0 Chordopoxvirus A30L protein Glyco_hydro_31 PF01055.26 gi|15922861|ref|NP_378530.1| - 1.9e-128 429.4 0.8 2.2e-128 429.2 0.8 1.1 1 0 0 1 1 1 1 Glycosyl hydrolases family 31 Gal_mutarotas_2 PF13802.6 gi|15922861|ref|NP_378530.1| - 8e-20 70.9 0.2 2e-19 69.6 0.0 1.8 2 0 0 2 2 2 1 Galactose mutarotase-like DUF608 PF04685.13 gi|15922862|ref|NP_378531.1| - 8.5e-75 252.2 1.7 5.7e-73 246.2 1.7 2.2 1 1 0 1 1 1 1 Glycosyl-hydrolase family 116, catalytic region Bac_rhamnosid6H PF17389.2 gi|15922862|ref|NP_378531.1| - 0.021 14.1 0.2 0.032 13.5 0.2 1.2 1 0 0 1 1 1 0 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain Glyco_hydr_116N PF12215.8 gi|15922862|ref|NP_378531.1| - 0.046 13.2 6.5 18 4.7 7.1 3.5 2 1 0 2 2 2 0 beta-glucosidase 2, glycosyl-hydrolase family 116 N-term MFS_1 PF07690.16 gi|15922863|ref|NP_378532.1| - 0.068 12.1 46.0 0.074 12.0 18.3 2.5 1 1 2 3 3 3 0 Major Facilitator Superfamily DUF608 PF04685.13 gi|15922864|ref|NP_378533.1| - 3.3e-31 108.8 0.8 7.7e-24 84.5 0.3 2.4 2 0 0 2 2 2 2 Glycosyl-hydrolase family 116, catalytic region Glyco_hydr_116N PF12215.8 gi|15922864|ref|NP_378533.1| - 3.7e-27 95.6 0.2 1.4e-20 74.0 0.0 2.6 3 0 0 3 3 3 2 beta-glucosidase 2, glycosyl-hydrolase family 116 N-term HTH_56 PF18662.1 gi|15922864|ref|NP_378533.1| - 0.29 11.2 3.7 12 6.0 0.2 2.8 2 0 0 2 2 2 0 Cch helix turn helix domain DUF1776 PF08643.10 gi|15922865|ref|NP_378534.1| - 0.0017 17.8 0.1 0.002 17.5 0.1 1.1 1 0 0 1 1 1 1 Fungal family of unknown function (DUF1776) DUF4883 PF16224.5 gi|15922865|ref|NP_378534.1| - 0.035 14.3 6.7 0.058 13.6 6.7 1.3 1 0 0 1 1 1 0 DOmain of unknown function (DUF4883) HTH_22 PF13309.6 gi|15922865|ref|NP_378534.1| - 2.8 8.1 5.4 16 5.6 0.4 3.0 2 1 1 3 3 3 0 HTH domain BPD_transp_1 PF00528.22 gi|15922866|ref|NP_378535.1| - 6e-25 88.1 18.7 6e-25 88.1 18.7 2.0 2 0 0 2 2 2 2 Binding-protein-dependent transport system inner membrane component OppC_N PF12911.7 gi|15922866|ref|NP_378535.1| - 0.00067 19.6 4.0 0.00067 19.6 4.0 3.7 5 0 0 5 5 5 1 N-terminal TM domain of oligopeptide transport permease C SBP_bac_5 PF00496.22 gi|15922868|ref|NP_378537.1| - 3.2e-40 138.3 0.6 6.5e-40 137.3 0.6 1.4 1 1 0 1 1 1 1 Bacterial extracellular solute-binding proteins, family 5 Middle RIFIN PF02009.16 gi|15922868|ref|NP_378537.1| - 0.12 12.3 1.9 0.17 11.7 1.9 1.2 1 0 0 1 1 1 0 Rifin DUF5305 PF17231.2 gi|15922868|ref|NP_378537.1| - 6.3 6.1 7.8 16 4.8 7.8 1.7 1 0 0 1 1 1 0 Family of unknown function (DUF5305) BPD_transp_1 PF00528.22 gi|15922869|ref|NP_378538.1| - 1.2e-34 119.6 10.2 1.2e-34 119.6 10.2 2.4 1 1 1 2 2 2 1 Binding-protein-dependent transport system inner membrane component DUF1422 PF07226.11 gi|15922869|ref|NP_378538.1| - 1.1 9.3 6.6 8.2 6.5 0.9 3.3 2 1 1 3 3 3 0 Protein of unknown function (DUF1422) DUF2897 PF11446.8 gi|15922869|ref|NP_378538.1| - 2 8.4 9.2 5.7 6.9 1.4 2.6 2 0 0 2 2 2 0 Protein of unknown function (DUF2897) ABC_tran PF00005.27 gi|15922870|ref|NP_378539.1| - 9.6e-32 110.4 0.0 1.4e-31 109.8 0.0 1.3 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|15922870|ref|NP_378539.1| - 3.2e-15 56.4 0.0 6.4e-15 55.4 0.0 1.5 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|15922870|ref|NP_378539.1| - 9.6e-13 48.6 1.8 1e-08 35.4 0.1 2.2 2 0 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|15922870|ref|NP_378539.1| - 9e-05 22.0 0.8 0.048 13.1 0.1 2.2 2 0 0 2 2 2 2 RecF/RecN/SMC N terminal domain IstB_IS21 PF01695.17 gi|15922870|ref|NP_378539.1| - 0.00034 20.4 0.2 0.045 13.5 0.0 2.4 3 0 0 3 3 2 1 IstB-like ATP binding protein AAA_22 PF13401.6 gi|15922870|ref|NP_378539.1| - 0.00055 20.2 0.8 0.0029 17.9 0.8 2.0 1 1 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|15922870|ref|NP_378539.1| - 0.00057 20.3 0.0 0.00087 19.7 0.0 1.4 1 1 0 1 1 1 1 AAA ATPase domain NB-ARC PF00931.22 gi|15922870|ref|NP_378539.1| - 0.00062 19.0 0.2 0.0094 15.2 0.1 2.1 2 0 0 2 2 2 1 NB-ARC domain AAA_29 PF13555.6 gi|15922870|ref|NP_378539.1| - 0.0011 18.6 0.1 0.0021 17.8 0.1 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_13 PF13166.6 gi|15922870|ref|NP_378539.1| - 0.002 16.8 1.0 0.55 8.8 0.1 2.7 2 1 1 3 3 3 1 AAA domain DUF87 PF01935.17 gi|15922870|ref|NP_378539.1| - 0.0028 17.8 0.7 0.0079 16.3 0.7 1.9 1 1 0 1 1 1 1 Helicase HerA, central domain MobB PF03205.14 gi|15922870|ref|NP_378539.1| - 0.0061 16.5 0.1 0.012 15.5 0.1 1.5 1 0 0 1 1 1 1 Molybdopterin guanine dinucleotide synthesis protein B AAA_23 PF13476.6 gi|15922870|ref|NP_378539.1| - 0.0065 17.0 0.0 0.009 16.5 0.0 1.4 1 0 0 1 1 1 1 AAA domain AAA PF00004.29 gi|15922870|ref|NP_378539.1| - 0.0068 16.8 0.2 0.012 16.0 0.2 1.7 1 1 0 1 1 1 1 ATPase family associated with various cellular activities (AAA) NACHT PF05729.12 gi|15922870|ref|NP_378539.1| - 0.0095 15.9 1.4 0.011 15.6 0.3 1.7 2 0 0 2 2 2 1 NACHT domain GCD14 PF08704.10 gi|15922870|ref|NP_378539.1| - 0.016 14.9 0.0 0.026 14.2 0.0 1.3 1 0 0 1 1 1 0 tRNA methyltransferase complex GCD14 subunit AAA_18 PF13238.6 gi|15922870|ref|NP_378539.1| - 0.02 15.5 0.0 0.037 14.6 0.0 1.5 1 0 0 1 1 1 0 AAA domain PRK PF00485.18 gi|15922870|ref|NP_378539.1| - 0.031 14.0 0.0 0.047 13.4 0.0 1.3 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family RsgA_GTPase PF03193.16 gi|15922870|ref|NP_378539.1| - 0.037 13.9 0.0 0.076 12.9 0.0 1.5 1 0 0 1 1 1 0 RsgA GTPase AAA_15 PF13175.6 gi|15922870|ref|NP_378539.1| - 0.041 13.6 2.7 0.22 11.2 0.7 2.1 1 1 1 2 2 2 0 AAA ATPase domain TsaE PF02367.17 gi|15922870|ref|NP_378539.1| - 0.045 13.7 0.0 0.095 12.7 0.0 1.5 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE NTPase_1 PF03266.15 gi|15922870|ref|NP_378539.1| - 0.05 13.5 0.2 0.12 12.2 0.2 1.7 1 0 0 1 1 1 0 NTPase ATPase PF06745.13 gi|15922870|ref|NP_378539.1| - 0.055 12.8 0.6 0.78 9.0 0.1 2.3 2 0 0 2 2 2 0 KaiC RNA_helicase PF00910.22 gi|15922870|ref|NP_378539.1| - 0.056 13.8 0.0 0.14 12.5 0.0 1.8 1 0 0 1 1 1 0 RNA helicase TniB PF05621.11 gi|15922870|ref|NP_378539.1| - 0.064 12.7 0.5 6.8 6.0 0.1 2.2 2 0 0 2 2 2 0 Bacterial TniB protein ATP-synt_ab PF00006.25 gi|15922870|ref|NP_378539.1| - 0.064 12.9 0.0 0.089 12.4 0.0 1.3 1 1 0 1 1 1 0 ATP synthase alpha/beta family, nucleotide-binding domain AAA_24 PF13479.6 gi|15922870|ref|NP_378539.1| - 0.079 12.7 0.6 0.12 12.1 0.1 1.6 2 0 0 2 2 1 0 AAA domain RuvB_N PF05496.12 gi|15922870|ref|NP_378539.1| - 0.085 12.6 0.0 0.13 12.0 0.0 1.3 1 0 0 1 1 1 0 Holliday junction DNA helicase RuvB P-loop domain ABC_ATPase PF09818.9 gi|15922870|ref|NP_378539.1| - 0.11 11.3 1.1 2.6 6.8 0.1 2.3 2 1 0 2 2 2 0 Predicted ATPase of the ABC class Phage_int_SAM_5 PF13102.6 gi|15922870|ref|NP_378539.1| - 0.15 12.4 0.1 0.3 11.5 0.1 1.5 1 0 0 1 1 1 0 Phage integrase SAM-like domain ATPase_2 PF01637.18 gi|15922870|ref|NP_378539.1| - 0.17 11.7 1.8 0.43 10.5 1.8 1.8 1 1 0 1 1 1 0 ATPase domain predominantly from Archaea AAA_19 PF13245.6 gi|15922870|ref|NP_378539.1| - 0.23 11.8 0.8 1 9.6 0.1 2.0 2 0 0 2 2 2 0 AAA domain ABC_tran PF00005.27 gi|15922871|ref|NP_378540.1| - 1.7e-27 96.6 0.0 3.2e-27 95.7 0.0 1.4 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|15922871|ref|NP_378540.1| - 6.7e-13 49.0 0.0 1.1e-12 48.2 0.0 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|15922871|ref|NP_378540.1| - 9.5e-07 28.9 0.9 0.032 14.1 0.1 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_13 PF13166.6 gi|15922871|ref|NP_378540.1| - 0.00015 20.6 0.5 0.047 12.4 0.1 2.1 2 0 0 2 2 2 2 AAA domain AAA_22 PF13401.6 gi|15922871|ref|NP_378540.1| - 0.0015 18.8 1.4 0.027 14.7 1.4 2.1 1 1 0 1 1 1 1 AAA domain Myosin_head PF00063.21 gi|15922871|ref|NP_378540.1| - 0.0062 14.8 0.0 0.0088 14.3 0.0 1.2 1 0 0 1 1 1 1 Myosin head (motor domain) AAA_15 PF13175.6 gi|15922871|ref|NP_378540.1| - 0.0064 16.2 0.1 1.4 8.6 0.0 2.4 2 0 0 2 2 2 2 AAA ATPase domain AAA_16 PF13191.6 gi|15922871|ref|NP_378540.1| - 0.0077 16.6 0.1 0.011 16.1 0.1 1.4 1 1 0 1 1 1 1 AAA ATPase domain AAA_29 PF13555.6 gi|15922871|ref|NP_378540.1| - 0.05 13.4 0.1 0.095 12.5 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain AAA PF00004.29 gi|15922871|ref|NP_378540.1| - 0.37 11.2 1.5 2.5 8.5 1.5 2.1 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) YesK PF14150.6 gi|15922872|ref|NP_378541.1| - 1.2 9.4 10.8 0.14 12.3 1.9 2.3 2 0 0 2 2 2 0 YesK-like protein SBP_bac_5 PF00496.22 gi|15922873|ref|NP_378542.1| - 2.5e-87 293.3 4.9 2.1e-65 221.1 1.6 2.6 2 1 1 3 3 3 2 Bacterial extracellular solute-binding proteins, family 5 Middle Shisa PF13908.6 gi|15922873|ref|NP_378542.1| - 0.04 14.2 9.0 0.07 13.4 9.0 1.3 1 0 0 1 1 1 0 Wnt and FGF inhibitory regulator DUF1505 PF07403.11 gi|15922873|ref|NP_378542.1| - 0.42 10.8 5.9 0.73 10.0 5.9 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1505) Pilin_N PF07790.11 gi|15922873|ref|NP_378542.1| - 1.5 9.8 8.5 3.5 8.6 8.5 1.7 1 0 0 1 1 1 0 Archaeal Type IV pilin, N-terminal Glycoprotein_G PF00802.19 gi|15922873|ref|NP_378542.1| - 1.8 7.8 25.2 2.8 7.3 25.2 1.2 1 0 0 1 1 1 0 Pneumovirus attachment glycoprotein G Mucin PF01456.17 gi|15922873|ref|NP_378542.1| - 2.5 8.1 42.4 4.6 7.2 42.4 1.4 1 0 0 1 1 1 0 Mucin-like glycoprotein BPD_transp_1 PF00528.22 gi|15922874|ref|NP_378543.1| - 2.8e-37 128.2 15.5 2.8e-37 128.2 15.5 2.2 2 0 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component BPD_transp_1 PF00528.22 gi|15922875|ref|NP_378544.1| - 2.1e-26 92.8 15.7 2.1e-26 92.8 15.7 2.4 2 1 0 2 2 2 1 Binding-protein-dependent transport system inner membrane component ABC_tran PF00005.27 gi|15922876|ref|NP_378545.1| - 1.8e-27 96.5 0.0 2.7e-27 96.0 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|15922876|ref|NP_378545.1| - 1.2e-19 70.5 0.0 2.2e-19 69.7 0.0 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|15922876|ref|NP_378545.1| - 3.3e-06 27.1 4.0 0.0001 22.2 0.3 2.2 1 1 0 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system SMC_N PF02463.19 gi|15922876|ref|NP_378545.1| - 0.00013 21.5 1.8 0.0016 18.0 1.8 2.1 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA_29 PF13555.6 gi|15922876|ref|NP_378545.1| - 0.0011 18.7 0.0 0.0019 17.9 0.0 1.4 1 0 0 1 1 1 1 P-loop containing region of AAA domain AAA_22 PF13401.6 gi|15922876|ref|NP_378545.1| - 0.0023 18.2 0.1 0.008 16.5 0.1 1.8 1 1 0 1 1 1 1 AAA domain DUF2007 PF09413.10 gi|15922876|ref|NP_378545.1| - 0.022 14.9 0.5 0.058 13.6 0.1 2.0 2 0 0 2 2 2 0 Putative prokaryotic signal transducing protein AAA_16 PF13191.6 gi|15922876|ref|NP_378545.1| - 0.036 14.4 0.1 0.054 13.9 0.1 1.6 1 1 0 1 1 1 0 AAA ATPase domain ABC_ATPase PF09818.9 gi|15922876|ref|NP_378545.1| - 0.045 12.5 0.8 0.51 9.1 0.1 2.4 2 1 0 2 2 2 0 Predicted ATPase of the ABC class TniB PF05621.11 gi|15922876|ref|NP_378545.1| - 0.062 12.7 0.2 1.1 8.6 0.1 2.2 2 0 0 2 2 2 0 Bacterial TniB protein PRK PF00485.18 gi|15922876|ref|NP_378545.1| - 0.077 12.7 0.1 0.13 11.9 0.1 1.4 1 0 0 1 1 1 0 Phosphoribulokinase / Uridine kinase family NB-ARC PF00931.22 gi|15922876|ref|NP_378545.1| - 0.095 11.9 0.1 0.21 10.7 0.1 1.6 1 0 0 1 1 1 0 NB-ARC domain NACHT PF05729.12 gi|15922876|ref|NP_378545.1| - 0.098 12.6 0.0 0.17 11.8 0.0 1.4 1 0 0 1 1 1 0 NACHT domain SNCAIP_SNCA_bd PF16700.5 gi|15922876|ref|NP_378545.1| - 0.11 12.2 0.2 0.22 11.3 0.2 1.4 1 0 0 1 1 1 0 Synphilin-1 alpha-Synuclein-binding domain Pallilysin PF18663.1 gi|15922876|ref|NP_378545.1| - 0.16 12.0 0.2 0.54 10.3 0.0 1.9 2 0 0 2 2 2 0 Pallilysin beta barrel domain ABC_tran PF00005.27 gi|15922877|ref|NP_378546.1| - 1e-33 116.7 0.0 1.4e-33 116.3 0.0 1.2 1 0 0 1 1 1 1 ABC transporter oligo_HPY PF08352.12 gi|15922877|ref|NP_378546.1| - 5.2e-20 71.7 0.1 9.1e-20 71.0 0.1 1.4 1 0 0 1 1 1 1 Oligopeptide/dipeptide transporter, C-terminal region AAA_21 PF13304.6 gi|15922877|ref|NP_378546.1| - 1.9e-08 34.5 1.3 3.1e-05 23.9 0.2 2.1 1 1 1 2 2 2 2 AAA domain, putative AbiEii toxin, Type IV TA system AAA_22 PF13401.6 gi|15922877|ref|NP_378546.1| - 1.4e-05 25.3 0.3 6.1e-05 23.3 0.3 1.9 1 1 0 1 1 1 1 AAA domain AAA_13 PF13166.6 gi|15922877|ref|NP_378546.1| - 5.7e-05 22.0 0.1 0.018 13.7 0.0 2.2 2 0 0 2 2 2 2 AAA domain SMC_N PF02463.19 gi|15922877|ref|NP_378546.1| - 0.00081 18.9 0.6 0.0084 15.6 0.6 2.0 1 1 0 1 1 1 1 RecF/RecN/SMC N terminal domain AAA PF00004.29 gi|15922877|ref|NP_378546.1| - 0.0068 16.8 0.4 0.059 13.8 0.1 2.1 1 1 0 2 2 2 1 ATPase family associated with various cellular activities (AAA) HECW1_helix PF18436.1 gi|15922877|ref|NP_378546.1| - 0.082 13.0 0.0 0.19 11.9 0.0 1.5 1 0 0 1 1 1 0 Helical box domain of E3 ubiquitin-protein ligase HECW1 ATPase PF06745.13 gi|15922877|ref|NP_378546.1| - 0.11 11.9 2.0 1 8.7 0.2 2.7 3 0 0 3 3 3 0 KaiC AAA_29 PF13555.6 gi|15922877|ref|NP_378546.1| - 0.12 12.1 0.1 0.25 11.1 0.1 1.4 1 0 0 1 1 1 0 P-loop containing region of AAA domain GTP_EFTU PF00009.27 gi|15922877|ref|NP_378546.1| - 0.16 11.5 0.1 0.3 10.6 0.0 1.6 2 0 0 2 2 2 0 Elongation factor Tu GTP binding domain SbcCD_C PF13558.6 gi|15922877|ref|NP_378546.1| - 0.22 11.8 0.0 0.67 10.2 0.0 1.8 1 1 0 1 1 1 0 Putative exonuclease SbcCD, C subunit NB-ARC PF00931.22 gi|15922877|ref|NP_378546.1| - 0.25 10.5 0.7 0.85 8.8 0.7 1.9 1 1 0 1 1 1 0 NB-ARC domain bPH_2 PF03703.14 gi|15922878|ref|NP_378547.1| - 9.2e-06 25.8 0.0 1.3e-05 25.2 0.0 1.3 1 0 0 1 1 1 1 Bacterial PH domain bPH_4 PF06713.11 gi|15922878|ref|NP_378547.1| - 0.012 15.7 0.6 0.018 15.1 0.6 1.4 1 0 0 1 1 1 0 Bacterial PH domain SIS PF01380.22 gi|15922879|ref|NP_378548.1| - 8.4e-35 119.5 1.8 1.1e-21 77.0 1.0 2.4 2 0 0 2 2 2 2 SIS domain GATase_6 PF13522.6 gi|15922879|ref|NP_378548.1| - 7.5e-15 55.3 0.0 1.5e-14 54.4 0.0 1.5 1 0 0 1 1 1 1 Glutamine amidotransferase domain GATase_7 PF13537.6 gi|15922879|ref|NP_378548.1| - 2.6e-14 53.2 0.0 4.9e-14 52.3 0.0 1.4 1 0 0 1 1 1 1 Glutamine amidotransferase domain SIS_2 PF13580.6 gi|15922879|ref|NP_378548.1| - 0.0031 17.5 1.2 0.015 15.3 0.2 2.6 4 0 0 4 4 4 1 SIS domain bact-PGI_C PF10432.9 gi|15922879|ref|NP_378548.1| - 0.0042 17.1 0.0 0.071 13.2 0.0 2.4 2 0 0 2 2 2 1 Bacterial phospho-glucose isomerase C-terminal SIS domain Amidohydro_1 PF01979.20 gi|15922880|ref|NP_378549.1| - 1.2e-21 77.4 0.3 4.5e-21 75.5 0.3 1.8 1 1 0 1 1 1 1 Amidohydrolase family Amidohydro_3 PF07969.11 gi|15922880|ref|NP_378549.1| - 2.4e-13 50.4 0.1 1.8e-05 24.4 0.0 2.2 2 0 0 2 2 2 2 Amidohydrolase family DUF3236 PF11576.8 gi|15922880|ref|NP_378549.1| - 0.02 14.6 0.3 0.21 11.3 0.2 2.2 1 1 1 2 2 2 0 Protein of unknown function (DUF3236) FAD_binding_4 PF01565.23 gi|15922881|ref|NP_378550.1| - 4.3e-27 94.6 0.0 8.5e-27 93.6 0.0 1.5 1 0 0 1 1 1 1 FAD binding domain FAD-oxidase_C PF02913.19 gi|15922881|ref|NP_378550.1| - 1.4e-05 24.8 0.2 0.00013 21.7 0.2 2.4 3 0 0 3 3 3 1 FAD linked oxidases, C-terminal domain DUF1177 PF06675.11 gi|15922882|ref|NP_378551.1| - 5.1e-103 343.6 0.2 6.3e-103 343.3 0.2 1.1 1 0 0 1 1 1 1 Protein of unknown function (DUF1177) Peptidase_M20 PF01546.28 gi|15922883|ref|NP_378552.1| - 3.2e-33 115.2 0.0 4.3e-33 114.8 0.0 1.2 1 0 0 1 1 1 1 Peptidase family M20/M25/M40 M20_dimer PF07687.14 gi|15922883|ref|NP_378552.1| - 2.3e-13 50.0 0.0 5e-13 48.9 0.0 1.6 1 0 0 1 1 1 1 Peptidase dimerisation domain HTH_10 PF04967.12 gi|15922884|ref|NP_378553.1| - 3.6e-23 81.1 0.0 8e-23 80.0 0.0 1.6 1 0 0 1 1 1 1 HTH DNA binding domain GerE PF00196.19 gi|15922884|ref|NP_378553.1| - 0.017 14.7 0.2 0.81 9.3 0.1 3.0 3 0 0 3 3 3 0 Bacterial regulatory proteins, luxR family SinI PF08671.10 gi|15922884|ref|NP_378553.1| - 0.047 13.5 0.1 0.18 11.7 0.0 2.0 2 0 0 2 2 2 0 Anti-repressor SinI HTH_19 PF12844.7 gi|15922884|ref|NP_378553.1| - 0.052 13.6 4.0 3.6 7.7 0.0 3.4 3 0 0 3 3 3 0 Helix-turn-helix domain HTH_20 PF12840.7 gi|15922884|ref|NP_378553.1| - 0.15 12.2 0.0 0.26 11.4 0.0 1.4 1 0 0 1 1 1 0 Helix-turn-helix domain AA_permease_2 PF13520.6 gi|15922885|ref|NP_378554.1| - 2.6e-29 102.3 63.4 4.8e-29 101.5 63.5 1.3 1 1 0 1 1 1 1 Amino acid permease AA_permease PF00324.21 gi|15922885|ref|NP_378554.1| - 2.9e-24 85.5 56.7 4.3e-24 85.0 56.7 1.2 1 0 0 1 1 1 1 Amino acid permease OrfB_IS605 PF01385.19 gi|15922886|ref|NP_378555.1| - 8.5e-36 122.8 0.7 8.5e-36 122.8 0.7 1.7 2 0 0 2 2 2 1 Probable transposase OrfB_Zn_ribbon PF07282.11 gi|15922886|ref|NP_378555.1| - 1.5e-19 69.7 0.0 3.1e-19 68.7 0.0 1.6 1 0 0 1 1 1 1 Putative transposase DNA-binding domain RuvX PF03652.15 gi|15922886|ref|NP_378555.1| - 4e-06 27.3 0.0 9.2e-06 26.1 0.0 1.6 1 0 0 1 1 1 1 Holliday junction resolvase VWD PF00094.25 gi|15922886|ref|NP_378555.1| - 0.32 11.3 3.4 0.32 11.3 0.3 2.4 2 1 1 3 3 3 0 von Willebrand factor type D domain Y1_Tnp PF01797.16 gi|15922887|ref|NP_378556.1| - 3.6e-42 143.3 0.0 4.1e-42 143.1 0.0 1.0 1 0 0 1 1 1 1 Transposase IS200 like GAD PF02938.14 gi|15922887|ref|NP_378556.1| - 0.046 14.0 0.2 5.2 7.4 0.0 2.1 2 0 0 2 2 2 0 GAD domain BRCT PF00533.26 gi|15922887|ref|NP_378556.1| - 0.093 13.1 0.0 0.16 12.4 0.0 1.6 1 1 0 1 1 1 0 BRCA1 C Terminus (BRCT) domain Raffinose_syn PF05691.12 gi|15922888|ref|NP_378557.1| - 2e-49 168.1 1.3 7.2e-28 96.8 0.7 3.1 1 1 1 2 2 2 2 Raffinose synthase or seed imbibition protein Sip1 Melibiase PF02065.18 gi|15922888|ref|NP_378557.1| - 4.3e-05 22.6 0.3 7.7e-05 21.8 0.3 1.3 1 0 0 1 1 1 1 Melibiase Melibiase_2 PF16499.5 gi|15922888|ref|NP_378557.1| - 0.00029 20.1 0.0 0.00056 19.2 0.0 1.4 1 0 0 1 1 1 1 Alpha galactosidase A SGL PF08450.12 gi|15922889|ref|NP_378558.1| - 3.9e-77 259.1 0.1 4.5e-77 258.9 0.1 1.0 1 0 0 1 1 1 1 SMP-30/Gluconolactonase/LRE-like region Arylesterase PF01731.20 gi|15922889|ref|NP_378558.1| - 0.0013 18.9 0.0 0.0027 17.9 0.0 1.5 1 0 0 1 1 1 1 Arylesterase PGI PF00342.19 gi|15922889|ref|NP_378558.1| - 0.0014 17.3 0.0 0.0018 16.9 0.0 1.1 1 0 0 1 1 1 1 Phosphoglucose isomerase SL4P PF17618.2 gi|15922889|ref|NP_378558.1| - 0.013 15.5 0.1 0.15 12.1 0.0 2.5 3 0 0 3 3 3 0 Uncharacterized Strongylid L4 protein Str_synth PF03088.16 gi|15922889|ref|NP_378558.1| - 0.024 14.8 0.0 0.064 13.4 0.0 1.7 1 0 0 1 1 1 0 Strictosidine synthase Reg_prop PF07494.11 gi|15922889|ref|NP_378558.1| - 0.12 12.7 1.8 11 6.7 0.2 3.6 3 0 0 3 3 3 0 Two component regulator propeller adh_short_C2 PF13561.6 gi|15922890|ref|NP_378559.1| - 2.8e-50 171.0 0.0 3.7e-50 170.7 0.0 1.0 1 0 0 1 1 1 1 Enoyl-(Acyl carrier protein) reductase adh_short PF00106.25 gi|15922890|ref|NP_378559.1| - 3.6e-43 147.3 0.1 4.6e-43 147.0 0.1 1.1 1 0 0 1 1 1 1 short chain dehydrogenase KR PF08659.10 gi|15922890|ref|NP_378559.1| - 9.2e-10 38.7 0.1 1.7e-09 37.9 0.1 1.4 1 0 0 1 1 1 1 KR domain Epimerase PF01370.21 gi|15922890|ref|NP_378559.1| - 9.2e-05 22.0 0.1 0.00037 20.1 0.0 1.9 2 1 0 2 2 2 1 NAD dependent epimerase/dehydratase family 2-Hacid_dh_C PF02826.19 gi|15922890|ref|NP_378559.1| - 0.0012 18.2 0.1 0.0026 17.2 0.1 1.6 1 0 0 1 1 1 1 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain THF_DHG_CYH_C PF02882.19 gi|15922890|ref|NP_378559.1| - 0.015 14.6 0.1 0.025 13.9 0.1 1.3 1 0 0 1 1 1 0 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DUF1776 PF08643.10 gi|15922890|ref|NP_378559.1| - 0.038 13.4 0.0 0.052 12.9 0.0 1.2 1 0 0 1 1 1 0 Fungal family of unknown function (DUF1776) Cpn10 PF00166.21 gi|15922890|ref|NP_378559.1| - 0.082 13.0 0.1 0.61 10.2 0.0 2.1 2 0 0 2 2 2 0 Chaperonin 10 Kd subunit RmlD_sub_bind PF04321.17 gi|15922890|ref|NP_378559.1| - 0.13 11.4 0.0 0.19 10.8 0.0 1.3 1 0 0 1 1 1 0 RmlD substrate binding domain NAD_binding_7 PF13241.6 gi|15922890|ref|NP_378559.1| - 0.16 12.5 0.0 0.26 11.7 0.0 1.5 1 0 0 1 1 1 0 Putative NAD(P)-binding Sugar_tr PF00083.24 gi|15922891|ref|NP_378560.1| - 3.9e-88 296.3 29.9 5e-88 295.9 29.9 1.1 1 0 0 1 1 1 1 Sugar (and other) transporter MFS_1 PF07690.16 gi|15922891|ref|NP_378560.1| - 8.6e-26 90.7 42.2 8.6e-26 90.7 42.2 2.0 1 1 1 2 2 2 2 Major Facilitator Superfamily SAF PF08666.12 gi|15922892|ref|NP_378561.1| - 7.8e-14 52.0 7.2 2.1e-13 50.7 7.2 1.8 1 1 0 1 1 1 1 SAF domain DUF2190 PF09956.9 gi|15922892|ref|NP_378561.1| - 0.00029 21.3 0.8 0.45 11.0 0.3 2.1 1 1 1 2 2 2 2 Uncharacterized conserved protein (DUF2190) GD_AH_C PF04295.13 gi|15922893|ref|NP_378562.1| - 7.8e-122 406.9 0.0 8.8e-122 406.7 0.0 1.0 1 0 0 1 1 1 1 D-galactarate dehydratase / Altronate hydrolase, C terminus MR_MLE_C PF13378.6 gi|15922894|ref|NP_378563.1| - 4.8e-42 144.0 0.0 9.2e-42 143.1 0.0 1.4 2 0 0 2 2 2 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 gi|15922894|ref|NP_378563.1| - 0.0052 17.0 0.0 0.01 16.1 0.0 1.4 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Gemini_AL3 PF01407.17 gi|15922894|ref|NP_378563.1| - 0.058 13.2 0.0 0.15 11.9 0.0 1.6 1 0 0 1 1 1 0 Geminivirus AL3 protein Borrelia_orfD PF02999.14 gi|15922894|ref|NP_378563.1| - 0.07 13.5 0.3 0.2 12.0 0.3 1.8 1 0 0 1 1 1 0 Borrelia orf-D family FCD PF07729.12 gi|15922895|ref|NP_378564.1| - 2.5e-26 92.6 1.8 3.5e-26 92.1 1.8 1.2 1 0 0 1 1 1 1 FCD domain GntR PF00392.21 gi|15922895|ref|NP_378564.1| - 5.5e-16 58.0 0.0 1.3e-15 56.8 0.0 1.7 1 0 0 1 1 1 1 Bacterial regulatory proteins, gntR family HTH_24 PF13412.6 gi|15922895|ref|NP_378564.1| - 6.9e-06 25.5 0.6 6.9e-06 25.5 0.6 2.6 3 1 0 3 3 3 1 Winged helix-turn-helix DNA-binding HTH_11 PF08279.12 gi|15922895|ref|NP_378564.1| - 2.3e-05 24.3 0.7 0.00037 20.4 0.1 2.9 2 1 0 2 2 2 1 HTH domain FadR_C PF07840.12 gi|15922895|ref|NP_378564.1| - 9.9e-05 22.3 0.1 0.00015 21.7 0.1 1.4 1 1 0 1 1 1 1 FadR C-terminal domain HTH_Crp_2 PF13545.6 gi|15922895|ref|NP_378564.1| - 0.00075 19.4 0.1 0.0019 18.1 0.0 1.7 1 1 0 1 1 1 1 Crp-like helix-turn-helix domain Phage_rep_O PF04492.13 gi|15922895|ref|NP_378564.1| - 0.0012 19.4 0.0 0.017 15.7 0.0 2.3 2 0 0 2 2 2 1 Bacteriophage replication protein O TrmB PF01978.19 gi|15922895|ref|NP_378564.1| - 0.0014 18.5 0.0 0.0051 16.7 0.0 1.9 1 0 0 1 1 1 1 Sugar-specific transcriptional regulator TrmB TRF PF08558.10 gi|15922895|ref|NP_378564.1| - 0.0015 18.1 0.6 0.0024 17.5 0.6 1.4 1 0 0 1 1 1 1 Telomere repeat binding factor (TRF) Prefoldin PF02996.17 gi|15922895|ref|NP_378564.1| - 0.0048 16.8 2.2 0.009 15.9 2.2 1.4 1 0 0 1 1 1 1 Prefoldin subunit Fe_dep_repress PF01325.19 gi|15922895|ref|NP_378564.1| - 0.0095 16.1 0.1 0.035 14.3 0.0 1.9 2 0 0 2 2 2 1 Iron dependent repressor, N-terminal DNA binding domain MarR PF01047.22 gi|15922895|ref|NP_378564.1| - 0.011 15.6 0.1 0.092 12.7 0.0 2.3 2 0 0 2 2 2 0 MarR family HTH_54 PF18607.1 gi|15922895|ref|NP_378564.1| - 0.015 15.3 0.0 0.054 13.6 0.0 1.8 2 0 0 2 2 2 0 ParA helix turn helix domain HTH_5 PF01022.20 gi|15922895|ref|NP_378564.1| - 0.022 14.6 0.0 1.3 9.0 0.0 2.9 2 1 0 2 2 2 0 Bacterial regulatory protein, arsR family TFIIE_alpha PF02002.17 gi|15922895|ref|NP_378564.1| - 0.026 14.4 0.0 0.026 14.4 0.0 3.1 3 1 0 3 3 3 0 TFIIE alpha subunit Phage_terminase PF10668.9 gi|15922895|ref|NP_378564.1| - 0.057 13.4 0.0 5.8 7.0 0.0 2.7 3 0 0 3 3 3 0 Phage terminase small subunit Rrf2 PF02082.20 gi|15922895|ref|NP_378564.1| - 0.061 13.7 0.0 0.15 12.4 0.0 1.7 1 0 0 1 1 1 0 Transcriptional regulator PaaX PF07848.12 gi|15922895|ref|NP_378564.1| - 0.063 13.5 0.0 0.22 11.8 0.0 1.8 2 0 0 2 2 2 0 PaaX-like protein RPA_C PF08784.11 gi|15922895|ref|NP_378564.1| - 0.11 13.2 0.0 0.32 11.7 0.0 1.8 1 0 0 1 1 1 0 Replication protein A C terminal TFIIE_beta PF02186.15 gi|15922895|ref|NP_378564.1| - 0.21 11.9 2.8 1.9 8.8 0.4 3.1 3 0 0 3 3 3 0 TFIIE beta subunit core domain Keratin PF02422.16 gi|15922896|ref|NP_378565.1| - 0.046 13.4 0.3 0.15 11.8 0.1 2.0 2 0 0 2 2 2 0 Keratin Rhodanese PF00581.20 gi|15922897|ref|NP_378566.1| - 5.7e-40 136.2 0.1 2.8e-20 72.8 0.0 2.2 2 0 0 2 2 2 2 Rhodanese-like domain TP_methylase PF00590.20 gi|15922898|ref|NP_378567.1| - 2.9e-06 27.4 0.0 3.4e-06 27.2 0.0 1.1 1 0 0 1 1 1 1 Tetrapyrrole (Corrin/Porphyrin) Methylases NIR_SIR PF01077.22 gi|15922899|ref|NP_378568.1| - 3.8e-46 156.5 0.3 1.3e-44 151.5 0.0 3.1 3 2 0 3 3 3 1 Nitrite and sulphite reductase 4Fe-4S domain NIR_SIR_ferr PF03460.17 gi|15922899|ref|NP_378568.1| - 2.2e-17 62.7 0.1 7.4e-09 35.3 0.0 3.8 3 1 0 3 3 3 2 Nitrite/Sulfite reductase ferredoxin-like half domain PRC PF05239.16 gi|15922899|ref|NP_378568.1| - 1.4 9.1 5.1 1.7 8.8 1.4 2.7 3 0 0 3 3 3 0 PRC-barrel domain PAPS_reduct PF01507.19 gi|15922900|ref|NP_378569.1| - 1.5e-48 165.1 0.1 1.8e-48 164.9 0.1 1.1 1 0 0 1 1 1 1 Phosphoadenosine phosphosulfate reductase family ATP-sulfurylase PF01747.17 gi|15922901|ref|NP_378570.1| - 1.7e-78 263.0 0.0 2.2e-78 262.6 0.0 1.1 1 0 0 1 1 1 1 ATP-sulfurylase PUA_2 PF14306.6 gi|15922901|ref|NP_378570.1| - 1.9e-38 131.6 0.0 3.6e-38 130.7 0.0 1.4 1 0 0 1 1 1 1 PUA-like domain TF_Zn_Ribbon PF08271.12 gi|15922901|ref|NP_378570.1| - 0.00023 20.6 0.2 0.0005 19.5 0.2 1.6 1 0 0 1 1 1 1 TFIIB zinc-binding DUF4835 PF16119.5 gi|15922902|ref|NP_378571.1| - 0.017 14.3 0.2 0.019 14.1 0.2 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4835) DUF4375 PF14300.6 gi|15922902|ref|NP_378571.1| - 0.041 14.1 0.0 0.073 13.3 0.0 1.4 1 1 0 1 1 1 0 Domain of unknown function (DUF4375) HAD_2 PF13419.6 gi|15922903|ref|NP_378572.1| - 1.2e-15 58.1 0.8 3.4e-15 56.6 0.8 1.6 1 1 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase_like PF13242.6 gi|15922903|ref|NP_378572.1| - 3.1e-06 27.2 0.0 5.3e-06 26.4 0.0 1.3 1 0 0 1 1 1 1 HAD-hyrolase-like Hydrolase PF00702.26 gi|15922903|ref|NP_378572.1| - 0.00047 20.5 0.1 0.03 14.6 0.0 2.1 1 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase Pro-kuma_activ PF09286.11 gi|15922903|ref|NP_378572.1| - 0.038 14.3 0.1 0.079 13.3 0.1 1.5 1 1 0 1 1 1 0 Pro-kumamolisin, activation domain Acatn PF13000.7 gi|15922903|ref|NP_378572.1| - 0.087 11.3 1.2 0.11 11.0 1.2 1.1 1 0 0 1 1 1 0 Acetyl-coenzyme A transporter 1 AAA_14 PF13173.6 gi|15922904|ref|NP_378573.1| - 4.4e-32 110.9 0.0 1.2e-31 109.4 0.0 1.8 1 0 0 1 1 1 1 AAA domain DUF4143 PF13635.6 gi|15922904|ref|NP_378573.1| - 1.4e-10 41.4 0.1 3.8e-10 40.0 0.1 1.7 2 0 0 2 2 2 1 Domain of unknown function (DUF4143) AAA_18 PF13238.6 gi|15922904|ref|NP_378573.1| - 0.00048 20.7 0.0 0.0014 19.2 0.0 1.8 1 0 0 1 1 1 1 AAA domain PCI PF01399.27 gi|15922904|ref|NP_378573.1| - 0.0051 17.3 0.3 0.012 16.1 0.3 1.6 1 0 0 1 1 1 1 PCI domain ABC_tran PF00005.27 gi|15922904|ref|NP_378573.1| - 0.007 16.9 0.0 0.018 15.6 0.0 1.6 1 1 0 1 1 1 1 ABC transporter AAA_24 PF13479.6 gi|15922904|ref|NP_378573.1| - 0.0073 16.0 0.0 0.014 15.1 0.0 1.6 1 0 0 1 1 1 1 AAA domain AAA_16 PF13191.6 gi|15922904|ref|NP_378573.1| - 0.043 14.2 0.0 0.071 13.5 0.0 1.4 1 0 0 1 1 1 0 AAA ATPase domain MR_MLE_C PF13378.6 gi|15922905|ref|NP_378574.1| - 2.4e-58 197.3 0.0 3.3e-58 196.9 0.0 1.1 1 0 0 1 1 1 1 Enolase C-terminal domain-like MR_MLE_N PF02746.16 gi|15922905|ref|NP_378574.1| - 1.5e-10 41.3 0.0 3.3e-10 40.2 0.0 1.5 1 0 0 1 1 1 1 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain Intein_splicing PF14890.6 gi|15922905|ref|NP_378574.1| - 0.081 12.9 0.2 0.22 11.5 0.2 1.7 1 0 0 1 1 1 0 Intein splicing domain YnfE PF17452.2 gi|15922905|ref|NP_378574.1| - 0.096 13.0 0.1 4.8 7.6 0.0 2.5 2 0 0 2 2 2 0 Uncharacterized YnfE-like Pyr_redox_2 PF07992.14 gi|15922906|ref|NP_378575.1| - 5.7e-43 147.2 0.7 6.9e-43 147.0 0.7 1.1 1 0 0 1 1 1 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox PF00070.27 gi|15922906|ref|NP_378575.1| - 8.3e-15 55.1 0.9 8.3e-15 55.1 0.9 2.8 2 1 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase Pyr_redox_3 PF13738.6 gi|15922906|ref|NP_378575.1| - 2.1e-10 40.4 1.1 3.2e-10 39.8 0.4 1.6 2 0 0 2 2 2 1 Pyridine nucleotide-disulphide oxidoreductase DAO PF01266.24 gi|15922906|ref|NP_378575.1| - 0.0002 21.1 0.6 1.7 8.1 0.0 3.3 3 0 0 3 3 3 2 FAD dependent oxidoreductase NAD_binding_8 PF13450.6 gi|15922906|ref|NP_378575.1| - 0.0012 19.0 1.3 0.01 16.1 0.0 2.3 2 0 0 2 2 2 1 NAD(P)-binding Rossmann-like domain AlaDh_PNT_C PF01262.21 gi|15922906|ref|NP_378575.1| - 0.0036 16.6 1.7 0.27 10.5 0.1 2.6 2 0 0 2 2 2 2 Alanine dehydrogenase/PNT, C-terminal domain 3HCDH_N PF02737.18 gi|15922906|ref|NP_378575.1| - 0.0085 16.0 0.8 0.013 15.4 0.1 1.7 2 0 0 2 2 2 1 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain HI0933_like PF03486.14 gi|15922906|ref|NP_378575.1| - 0.011 14.5 5.7 0.094 11.4 0.2 3.7 3 1 1 4 4 4 0 HI0933-like protein GIDA PF01134.22 gi|15922906|ref|NP_378575.1| - 0.013 14.6 2.6 0.34 9.9 0.1 2.8 2 1 1 3 3 3 0 Glucose inhibited division protein A NAD_Gly3P_dh_N PF01210.23 gi|15922906|ref|NP_378575.1| - 0.024 14.6 0.0 0.056 13.4 0.0 1.7 1 0 0 1 1 1 0 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FAD_binding_3 PF01494.19 gi|15922906|ref|NP_378575.1| - 0.13 11.5 0.1 0.13 11.5 0.1 1.9 2 0 0 2 2 2 0 FAD binding domain Lycopene_cycl PF05834.12 gi|15922906|ref|NP_378575.1| - 0.96 8.4 4.7 1.4 7.8 0.2 2.8 2 2 1 3 3 3 0 Lycopene cyclase protein CoA_transf_3 PF02515.17 gi|15922907|ref|NP_378576.1| - 6.3e-71 239.4 0.0 8e-71 239.1 0.0 1.0 1 0 0 1 1 1 1 CoA-transferase family III AMP-binding PF00501.28 gi|15922908|ref|NP_378577.1| - 6.9e-84 281.9 0.0 8.7e-84 281.5 0.0 1.0 1 0 0 1 1 1 1 AMP-binding enzyme AMP-binding_C PF13193.6 gi|15922908|ref|NP_378577.1| - 9.6e-25 87.4 0.3 4.7e-24 85.1 0.1 2.3 2 0 0 2 2 2 1 AMP-binding enzyme C-terminal domain MFS_1 PF07690.16 gi|15922909|ref|NP_378578.1| - 2.4e-26 92.5 49.7 2.4e-26 92.5 49.7 2.0 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|15922909|ref|NP_378578.1| - 9.7e-18 64.2 32.6 8e-16 57.9 12.0 2.2 1 1 0 2 2 2 2 Sugar (and other) transporter ADH_N PF08240.12 gi|15922910|ref|NP_378579.1| - 1.6e-34 118.1 0.1 2.6e-34 117.4 0.1 1.4 1 0 0 1 1 1 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|15922910|ref|NP_378579.1| - 1.1e-27 96.6 0.2 2.1e-27 95.6 0.2 1.5 1 0 0 1 1 1 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|15922910|ref|NP_378579.1| - 1.3e-14 55.4 0.1 3.1e-14 54.2 0.0 1.7 2 0 0 2 2 2 1 Zinc-binding dehydrogenase Methyltransf_31 PF13847.6 gi|15922910|ref|NP_378579.1| - 4.1e-05 23.4 0.2 8.2e-05 22.4 0.2 1.4 1 1 0 1 1 1 1 Methyltransferase domain Methyltransf_25 PF13649.6 gi|15922910|ref|NP_378579.1| - 0.00078 20.1 0.1 0.0014 19.2 0.1 1.4 1 0 0 1 1 1 1 Methyltransferase domain DapB_N PF01113.20 gi|15922910|ref|NP_378579.1| - 0.0011 19.0 0.2 0.0021 18.2 0.2 1.5 1 0 0 1 1 1 1 Dihydrodipicolinate reductase, N-terminus Methyltransf_12 PF08242.12 gi|15922910|ref|NP_378579.1| - 0.0016 19.1 0.0 0.0029 18.3 0.0 1.4 1 0 0 1 1 1 1 Methyltransferase domain MTS PF05175.14 gi|15922910|ref|NP_378579.1| - 0.014 14.9 0.1 0.026 14.1 0.1 1.4 1 0 0 1 1 1 0 Methyltransferase small domain TrkA_N PF02254.18 gi|15922910|ref|NP_378579.1| - 0.058 13.7 0.1 0.11 12.7 0.1 1.5 1 0 0 1 1 1 0 TrkA-N domain Methyltransf_11 PF08241.12 gi|15922910|ref|NP_378579.1| - 0.11 13.2 0.1 0.22 12.2 0.1 1.5 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_32 PF13679.6 gi|15922910|ref|NP_378579.1| - 0.12 12.4 0.0 0.19 11.7 0.0 1.3 1 0 0 1 1 1 0 Methyltransferase domain Methyltransf_4 PF02390.17 gi|15922910|ref|NP_378579.1| - 0.18 11.3 0.2 0.37 10.2 0.2 1.5 1 0 0 1 1 1 0 Putative methyltransferase PaREP1 PF05942.11 gi|15922911|ref|NP_378580.1| - 8.9e-36 122.3 2.8 1.2e-35 121.9 2.8 1.2 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family DUF357 PF04010.13 gi|15922911|ref|NP_378580.1| - 0.0005 20.1 0.1 0.0013 18.7 0.1 1.8 1 1 0 1 1 1 1 Protein of unknown function (DUF357) HEPN PF05168.14 gi|15922911|ref|NP_378580.1| - 0.024 14.8 2.9 0.051 13.7 1.3 2.1 2 0 0 2 2 2 0 HEPN domain DUF3126 PF11324.8 gi|15922911|ref|NP_378580.1| - 0.027 14.3 0.1 0.058 13.2 0.1 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3126) FliS PF02561.14 gi|15922911|ref|NP_378580.1| - 0.049 13.9 0.2 0.076 13.3 0.2 1.3 1 0 0 1 1 1 0 Flagellar protein FliS PTS_IIA PF02255.16 gi|15922911|ref|NP_378580.1| - 0.074 13.1 0.3 0.36 10.9 0.2 2.0 2 1 1 3 3 3 0 PTS system, Lactose/Cellobiose specific IIA subunit PaREP1 PF05942.11 gi|15922912|ref|NP_378581.1| - 1.8e-26 92.3 0.6 1.8e-26 92.3 0.6 1.4 2 0 0 2 2 2 1 Archaeal PaREP1/PaREP8 family Antiterm PF03589.13 gi|15922912|ref|NP_378581.1| - 0.0089 16.3 0.1 2.4 8.5 0.0 2.3 2 0 0 2 2 2 2 Antitermination protein FixS PF03597.15 gi|15922914|ref|NP_378583.1| - 0.04 13.6 5.4 0.98 9.2 0.4 3.9 2 0 0 2 2 2 0 Cytochrome oxidase maturation protein cbb3-type MFS_1 PF07690.16 gi|15922914|ref|NP_378583.1| - 8 5.3 61.3 1.4e+02 1.2 54.3 2.8 1 1 0 1 1 1 0 Major Facilitator Superfamily MazE_antitoxin PF04014.18 gi|15922915|ref|NP_378584.1| - 3.8e-10 39.4 0.8 5.2e-10 39.0 0.8 1.3 1 0 0 1 1 1 1 Antidote-toxin recognition MazE, bacterial antitoxin PrlF_antitoxin PF15937.5 gi|15922915|ref|NP_378584.1| - 3.4e-06 27.4 0.1 4.4e-06 27.0 0.1 1.1 1 0 0 1 1 1 1 prlF antitoxin for toxin YhaV_toxin NTP_transf_2 PF01909.23 gi|15922917|ref|NP_378586.1| - 1.3e-09 38.2 0.9 3.7e-09 36.8 0.9 1.8 1 1 0 1 1 1 1 Nucleotidyltransferase domain Polbeta PF18765.1 gi|15922917|ref|NP_378586.1| - 1.5e-08 34.6 0.0 2.7e-08 33.8 0.0 1.5 1 0 0 1 1 1 1 Polymerase beta, Nucleotidyltransferase DUF294 PF03445.13 gi|15922917|ref|NP_378586.1| - 0.00044 20.1 0.0 0.0023 17.7 0.0 1.9 2 0 0 2 2 2 1 Putative nucleotidyltransferase DUF294 AAA PF00004.29 gi|15922918|ref|NP_378587.1| - 5.4e-99 327.8 0.0 2.9e-48 163.6 0.0 2.4 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) AAA_lid_3 PF17862.1 gi|15922918|ref|NP_378587.1| - 2.3e-30 104.1 0.7 3.1e-15 55.7 0.1 2.6 2 0 0 2 2 2 2 AAA+ lid domain RuvB_N PF05496.12 gi|15922918|ref|NP_378587.1| - 1.4e-15 57.4 0.0 8.6e-07 28.8 0.0 3.1 4 0 0 4 4 2 2 Holliday junction DNA helicase RuvB P-loop domain AAA_5 PF07728.14 gi|15922918|ref|NP_378587.1| - 4e-15 56.0 0.2 2.2e-06 27.7 0.0 3.7 2 2 0 2 2 2 2 AAA domain (dynein-related subfamily) AAA_16 PF13191.6 gi|15922918|ref|NP_378587.1| - 3.9e-14 53.4 0.0 2.7e-05 24.6 0.0 3.7 2 2 0 2 2 2 2 AAA ATPase domain AAA_2 PF07724.14 gi|15922918|ref|NP_378587.1| - 6.6e-12 45.9 0.0 0.00015 21.9 0.0 2.7 2 1 0 2 2 2 2 AAA domain (Cdc48 subfamily) AAA_22 PF13401.6 gi|15922918|ref|NP_378587.1| - 3.1e-11 43.7 0.2 0.00094 19.5 0.0 3.8 2 2 1 3 3 3 2 AAA domain AAA_14 PF13173.6 gi|15922918|ref|NP_378587.1| - 4e-11 43.1 0.0 0.00033 20.7 0.0 2.8 3 0 0 3 3 2 2 AAA domain TIP49 PF06068.13 gi|15922918|ref|NP_378587.1| - 7.3e-11 41.9 0.1 5.8e-05 22.5 0.0 2.4 2 0 0 2 2 2 2 TIP49 P-loop domain Vps4_C PF09336.10 gi|15922918|ref|NP_378587.1| - 9.4e-10 38.4 0.1 0.00016 21.6 0.0 3.6 3 0 0 3 3 3 2 Vps4 C terminal oligomerisation domain AAA_33 PF13671.6 gi|15922918|ref|NP_378587.1| - 1.1e-08 35.4 0.0 0.00027 21.1 0.0 2.5 2 0 0 2 2 2 2 AAA domain AAA_24 PF13479.6 gi|15922918|ref|NP_378587.1| - 1.9e-08 34.2 0.0 0.0016 18.2 0.0 2.5 2 0 0 2 2 2 2 AAA domain Sigma54_activat PF00158.26 gi|15922918|ref|NP_378587.1| - 5e-08 32.8 0.1 0.0098 15.6 0.0 3.8 2 2 1 3 3 3 2 Sigma-54 interaction domain Mg_chelatase PF01078.21 gi|15922918|ref|NP_378587.1| - 7.1e-08 32.1 0.6 0.011 15.1 0.1 2.3 2 0 0 2 2 2 2 Magnesium chelatase, subunit ChlI AAA_18 PF13238.6 gi|15922918|ref|NP_378587.1| - 9.1e-08 32.7 0.0 0.0098 16.4 0.0 2.7 2 0 0 2 2 2 2 AAA domain IstB_IS21 PF01695.17 gi|15922918|ref|NP_378587.1| - 9.2e-08 32.0 0.2 0.017 14.9 0.0 2.7 2 1 0 2 2 2 2 IstB-like ATP binding protein RNA_helicase PF00910.22 gi|15922918|ref|NP_378587.1| - 1.4e-07 31.8 0.0 0.0067 16.8 0.0 2.7 2 0 0 2 2 2 2 RNA helicase AAA_28 PF13521.6 gi|15922918|ref|NP_378587.1| - 1.7e-07 31.7 0.0 0.017 15.4 0.0 2.4 2 0 0 2 2 2 2 AAA domain ATPase_2 PF01637.18 gi|15922918|ref|NP_378587.1| - 3.3e-07 30.5 0.1 0.057 13.3 0.0 3.6 2 1 1 3 3 3 2 ATPase domain predominantly from Archaea Parvo_NS1 PF01057.17 gi|15922918|ref|NP_378587.1| - 1.1e-06 28.0 0.3 0.011 14.9 0.1 2.3 2 0 0 2 2 2 2 Parvovirus non-structural protein NS1 CDC48_N PF02359.18 gi|15922918|ref|NP_378587.1| - 2.7e-06 27.5 0.0 1.1e-05 25.5 0.0 2.1 1 0 0 1 1 1 1 Cell division protein 48 (CDC48), N-terminal domain TsaE PF02367.17 gi|15922918|ref|NP_378587.1| - 3.2e-06 27.1 0.1 0.069 13.2 0.0 2.7 2 1 0 2 2 2 2 Threonylcarbamoyl adenosine biosynthesis protein TsaE Bac_DnaA PF00308.18 gi|15922918|ref|NP_378587.1| - 4e-06 26.8 0.0 0.075 12.9 0.0 3.7 2 2 1 3 3 3 2 Bacterial dnaA protein AAA_7 PF12775.7 gi|15922918|ref|NP_378587.1| - 8.7e-06 25.4 0.0 0.071 12.6 0.1 2.9 2 1 0 2 2 2 2 P-loop containing dynein motor region DUF815 PF05673.13 gi|15922918|ref|NP_378587.1| - 1.5e-05 24.3 0.0 0.15 11.2 0.0 2.6 2 1 0 2 2 2 2 Protein of unknown function (DUF815) AAA_25 PF13481.6 gi|15922918|ref|NP_378587.1| - 1.7e-05 24.5 6.4 0.11 12.0 0.1 4.1 2 2 1 4 4 4 2 AAA domain AAA_3 PF07726.11 gi|15922918|ref|NP_378587.1| - 2.7e-05 24.0 0.0 0.28 11.0 0.0 2.7 2 0 0 2 2 2 2 ATPase family associated with various cellular activities (AAA) NB-ARC PF00931.22 gi|15922918|ref|NP_378587.1| - 4.2e-05 22.8 0.0 0.093 11.9 0.0 2.8 2 1 0 2 2 2 2 NB-ARC domain Zeta_toxin PF06414.12 gi|15922918|ref|NP_378587.1| - 7.2e-05 22.2 0.1 0.07 12.4 0.0 2.5 2 0 0 2 2 2 2 Zeta toxin ATPase PF06745.13 gi|15922918|ref|NP_378587.1| - 8.3e-05 22.0 2.3 0.83 9.0 0.0 4.2 3 2 0 4 4 4 2 KaiC NACHT PF05729.12 gi|15922918|ref|NP_378587.1| - 9.9e-05 22.3 0.6 0.17 11.8 0.0 2.9 4 0 0 4 4 2 2 NACHT domain AAA_11 PF13086.6 gi|15922918|ref|NP_378587.1| - 0.0001 22.2 0.0 0.43 10.3 0.0 2.4 2 0 0 2 2 2 2 AAA domain PhoH PF02562.16 gi|15922918|ref|NP_378587.1| - 0.00012 21.7 0.2 0.36 10.3 0.0 2.5 2 0 0 2 2 2 2 PhoH-like protein AAA_19 PF13245.6 gi|15922918|ref|NP_378587.1| - 0.00013 22.4 0.4 0.86 9.9 0.0 2.8 3 0 0 3 3 2 2 AAA domain Sigma54_activ_2 PF14532.6 gi|15922918|ref|NP_378587.1| - 0.00019 21.5 0.0 1 9.5 0.0 2.9 2 0 0 2 2 2 2 Sigma-54 interaction domain DUF2075 PF09848.9 gi|15922918|ref|NP_378587.1| - 0.0003 20.2 0.0 0.25 10.5 0.0 2.2 2 0 0 2 2 2 2 Uncharacterized conserved protein (DUF2075) AAA_30 PF13604.6 gi|15922918|ref|NP_378587.1| - 0.0004 20.2 0.2 0.6 9.8 0.0 2.5 2 0 0 2 2 2 2 AAA domain ABC_tran PF00005.27 gi|15922918|ref|NP_378587.1| - 0.00047 20.7 0.0 1.7 9.2 0.0 2.7 2 0 0 2 2 2 2 ABC transporter TniB PF05621.11 gi|15922918|ref|NP_378587.1| - 0.0022 17.4 0.0 2.3 7.6 0.0 3.5 3 1 1 4 4 4 1 Bacterial TniB protein AAA_17 PF13207.6 gi|15922918|ref|NP_378587.1| - 0.0024 18.3 0.0 1.6 9.2 0.0 2.5 2 0 0 2 2 2 1 AAA domain NTPase_1 PF03266.15 gi|15922918|ref|NP_378587.1| - 0.003 17.5 1.8 6.8 6.6 0.0 4.2 3 2 2 5 5 4 0 NTPase Rad17 PF03215.15 gi|15922918|ref|NP_378587.1| - 0.0054 16.7 0.0 3.9 7.3 0.0 3.2 2 1 0 3 3 3 0 Rad17 P-loop domain Cytidylate_kin PF02224.18 gi|15922918|ref|NP_378587.1| - 0.011 15.5 0.1 3.3 7.4 0.0 2.4 2 0 0 2 2 2 0 Cytidylate kinase AAA_29 PF13555.6 gi|15922918|ref|NP_378587.1| - 0.016 14.9 0.0 8.6 6.2 0.0 2.5 2 0 0 2 2 2 0 P-loop containing region of AAA domain Viral_helicase1 PF01443.18 gi|15922918|ref|NP_378587.1| - 0.017 14.9 0.0 0.49 10.1 0.0 2.3 2 0 0 2 2 2 0 Viral (Superfamily 1) RNA helicase DAP3 PF10236.9 gi|15922918|ref|NP_378587.1| - 0.024 13.8 0.0 4.3 6.4 0.0 2.9 3 0 0 3 3 3 0 Mitochondrial ribosomal death-associated protein 3 IPT PF01745.16 gi|15922918|ref|NP_378587.1| - 0.025 14.0 0.1 0.84 9.0 0.0 2.4 2 0 0 2 2 2 0 Isopentenyl transferase CPT PF07931.12 gi|15922918|ref|NP_378587.1| - 0.035 14.0 0.0 9.7 6.0 0.0 2.3 2 0 0 2 2 2 0 Chloramphenicol phosphotransferase-like protein ResIII PF04851.15 gi|15922918|ref|NP_378587.1| - 0.04 13.9 0.0 5.4 7.0 0.0 2.6 2 1 0 2 2 2 0 Type III restriction enzyme, res subunit AAA_6 PF12774.7 gi|15922918|ref|NP_378587.1| - 0.048 12.6 0.0 7.8 5.4 0.0 2.7 3 0 0 3 3 3 0 Hydrolytic ATP binding site of dynein motor region Guanylate_kin PF00625.21 gi|15922918|ref|NP_378587.1| - 0.074 12.7 0.3 54 3.4 0.0 3.9 2 2 2 4 4 4 0 Guanylate kinase T2SSE PF00437.20 gi|15922918|ref|NP_378587.1| - 0.089 11.8 0.0 17 4.4 0.0 2.7 3 0 0 3 3 3 0 Type II/IV secretion system protein AAA_23 PF13476.6 gi|15922918|ref|NP_378587.1| - 0.13 12.8 0.1 28 5.1 0.0 3.2 3 0 0 3 3 3 0 AAA domain MCM PF00493.23 gi|15922918|ref|NP_378587.1| - 0.14 11.3 0.0 12 5.0 0.0 2.5 3 0 0 3 3 2 0 MCM P-loop domain Torsin PF06309.11 gi|15922918|ref|NP_378587.1| - 0.19 11.8 0.0 17 5.5 0.0 2.5 2 0 0 2 2 2 0 Torsin Vps55 PF04133.14 gi|15922919|ref|NP_378588.1| - 0.09 12.7 9.1 0.14 12.1 9.1 1.4 1 1 0 1 1 1 0 Vacuolar protein sorting 55 mRNA_decap_C PF16741.5 gi|15922921|ref|NP_378590.1| - 0.023 14.0 0.6 22 4.5 0.1 3.6 3 0 0 3 3 3 0 mRNA-decapping enzyme C-terminus CagE_TrbE_VirB PF03135.14 gi|15922921|ref|NP_378590.1| - 0.16 12.0 2.8 0.19 11.8 1.2 1.9 2 0 0 2 2 2 0 CagE, TrbE, VirB family, component of type IV transporter system Col_cuticle_N PF01484.17 gi|15922922|ref|NP_378591.1| - 0.95 9.6 9.2 9.8 6.3 0.7 3.7 2 0 0 2 2 2 0 Nematode cuticle collagen N-terminal domain DUF1404 PF07185.11 gi|15922923|ref|NP_378592.1| - 7.6e-52 175.4 17.1 8.7e-52 175.2 17.1 1.0 1 0 0 1 1 1 1 Protein of unknown function (DUF1404) DUF3021 PF11457.8 gi|15922924|ref|NP_378593.1| - 0.055 13.8 0.9 0.061 13.7 0.9 1.0 1 0 0 1 1 1 0 Protein of unknown function (DUF3021) SP_C-Propep PF08999.10 gi|15922924|ref|NP_378593.1| - 6.3 6.7 7.4 3.2 7.6 3.5 2.0 1 1 1 2 2 2 0 Surfactant protein C, N terminal propeptide TMEMspv1-c74-12 PF11044.8 gi|15922926|ref|NP_378595.1| - 0.097 12.7 0.1 0.097 12.7 0.1 4.4 4 0 0 4 4 4 0 Plectrovirus spv1-c74 ORF 12 transmembrane protein EB_dh PF09459.10 gi|15922927|ref|NP_378596.1| - 0.0018 18.3 0.1 0.0019 18.2 0.1 1.1 1 0 0 1 1 1 1 Ethylbenzene dehydrogenase DUF3930 PF13067.6 gi|15922928|ref|NP_378597.1| - 0.073 13.3 1.4 0.19 12.0 1.4 1.6 1 0 0 1 1 1 0 Protein of unknown function (DUF3930) COX2 PF00116.20 gi|15922929|ref|NP_378598.1| - 2e-07 30.9 0.1 2e-07 30.9 0.1 2.5 2 1 1 3 3 3 2 Cytochrome C oxidase subunit II, periplasmic domain COX1 PF00115.20 gi|15922930|ref|NP_378599.1| - 7.1e-77 259.1 60.5 7.1e-77 259.1 60.5 1.9 1 1 0 2 2 2 2 Cytochrome C and Quinol oxidase polypeptide I DDE_Tnp_1_assoc PF13808.6 gi|15922931|ref|NP_378600.1| - 0.0021 18.1 0.1 0.01 15.8 0.1 2.0 1 1 1 2 2 2 1 DDE_Tnp_1-associated Citrate_ly_lig PF08218.11 gi|15922931|ref|NP_378600.1| - 0.0085 15.8 0.1 0.0097 15.6 0.1 1.2 1 0 0 1 1 1 1 Citrate lyase ligase C-terminal domain DEAD_assoc PF08494.11 gi|15922931|ref|NP_378600.1| - 0.0097 15.7 0.1 0.012 15.4 0.1 1.1 1 0 0 1 1 1 1 DEAD/H associated Head-tail_con PF12236.8 gi|15922931|ref|NP_378600.1| - 0.014 13.9 0.0 0.017 13.6 0.0 1.0 1 0 0 1 1 1 0 Bacteriophage head to tail connecting protein HTH_Tnp_Tc3_2 PF01498.18 gi|15922931|ref|NP_378600.1| - 0.019 15.2 0.1 0.027 14.7 0.1 1.3 1 0 0 1 1 1 0 Transposase ARTD15_N PF18084.1 gi|15922931|ref|NP_378600.1| - 0.11 12.7 0.1 0.63 10.3 0.0 2.1 1 1 1 2 2 2 0 ARTD15 N-terminal domain DUF4988 PF16378.5 gi|15922932|ref|NP_378601.1| - 0.074 12.7 0.0 0.12 12.0 0.0 1.4 1 0 0 1 1 1 0 Domain of unknown function FtsH_ext PF06480.15 gi|15922932|ref|NP_378601.1| - 0.57 10.6 6.5 0.89 9.9 6.4 1.4 1 1 0 1 1 1 0 FtsH Extracellular Fer4_5 PF12801.7 gi|15922933|ref|NP_378602.1| - 7e-05 22.7 1.4 7e-05 22.7 1.4 4.6 6 0 0 6 6 6 2 4Fe-4S binding domain UcrQ PF02939.16 gi|15922933|ref|NP_378602.1| - 0.099 12.6 0.0 0.28 11.2 0.0 1.7 1 0 0 1 1 1 0 UcrQ family DUF3180 PF11377.8 gi|15922933|ref|NP_378602.1| - 0.1 12.7 0.3 0.1 12.7 0.3 2.0 3 0 0 3 3 3 0 Protein of unknown function (DUF3180) AdoMet_dc PF02675.15 gi|15922935|ref|NP_378604.1| - 0.028 14.7 0.2 0.032 14.5 0.2 1.1 1 0 0 1 1 1 0 S-adenosylmethionine decarboxylase CBS PF00571.28 gi|15922936|ref|NP_378605.1| - 1.7e-27 95.6 6.7 1.5e-09 38.1 0.2 5.3 4 1 0 4 4 4 4 CBS domain Fer4_21 PF14697.6 gi|15922936|ref|NP_378605.1| - 1.7e-07 31.3 16.5 4.4e-07 29.9 16.5 1.7 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_10 PF13237.6 gi|15922936|ref|NP_378605.1| - 9.4e-07 28.9 13.5 2e-06 27.8 13.5 1.6 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_7 PF12838.7 gi|15922936|ref|NP_378605.1| - 3.6e-06 27.5 17.9 7.2e-06 26.5 17.9 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4_2 PF12797.7 gi|15922936|ref|NP_378605.1| - 4.6e-06 26.4 14.3 0.0068 16.4 3.9 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_6 PF12837.7 gi|15922936|ref|NP_378605.1| - 7.9e-06 25.7 23.5 0.0084 16.2 6.8 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_9 PF13187.6 gi|15922936|ref|NP_378605.1| - 1e-05 25.6 17.1 1.9e-05 24.7 17.1 1.5 1 0 0 1 1 1 1 4Fe-4S dicluster domain Fer4 PF00037.27 gi|15922936|ref|NP_378605.1| - 1.5e-05 24.6 23.0 0.00084 19.1 8.9 2.6 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_4 PF12800.7 gi|15922936|ref|NP_378605.1| - 0.00081 19.7 15.3 0.0078 16.6 4.4 2.4 2 0 0 2 2 2 2 4Fe-4S binding domain Fer4_8 PF13183.6 gi|15922936|ref|NP_378605.1| - 0.0022 18.4 18.0 0.024 15.1 18.0 2.3 1 1 0 1 1 1 1 4Fe-4S dicluster domain Fer4_16 PF13484.6 gi|15922936|ref|NP_378605.1| - 0.035 15.0 4.4 0.035 15.0 4.4 2.7 1 1 3 4 4 4 0 4Fe-4S double cluster binding domain Fer4_17 PF13534.6 gi|15922936|ref|NP_378605.1| - 0.076 13.6 17.8 0.14 12.7 4.9 2.6 1 1 1 2 2 2 0 4Fe-4S dicluster domain TMEM70 PF06979.12 gi|15922936|ref|NP_378605.1| - 0.11 12.9 0.2 0.35 11.3 0.0 1.8 2 0 0 2 2 2 0 Assembly, mitochondrial proton-transport ATP synth complex Fer4_3 PF12798.7 gi|15922936|ref|NP_378605.1| - 0.65 11.1 22.8 0.15 13.0 9.2 2.6 2 0 0 2 2 2 0 4Fe-4S binding domain Fer4_22 PF17179.4 gi|15922936|ref|NP_378605.1| - 3 8.8 17.5 7 7.6 5.3 2.4 1 1 2 3 3 3 0 4Fe-4S dicluster domain ABM PF03992.16 gi|15922937|ref|NP_378606.1| - 4.1e-15 55.6 0.0 5.1e-15 55.4 0.0 1.1 1 0 0 1 1 1 1 Antibiotic biosynthesis monooxygenase SOR PF07682.11 gi|15922937|ref|NP_378606.1| - 0.048 12.5 0.1 1.3 7.8 0.0 2.0 1 1 1 2 2 2 0 Sulphur oxygenase reductase CopD PF05425.13 gi|15922938|ref|NP_378607.1| - 9 6.7 12.5 0.69 10.3 5.7 2.5 1 1 1 2 2 2 0 Copper resistance protein D MFS_1 PF07690.16 gi|15922939|ref|NP_378608.1| - 2.2e-39 135.4 44.8 1.5e-38 132.7 41.6 2.7 2 1 0 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|15922939|ref|NP_378608.1| - 5.5e-08 32.1 0.6 5.5e-08 32.1 0.6 3.8 1 1 1 3 3 3 1 Sugar (and other) transporter OATP PF03137.20 gi|15922939|ref|NP_378608.1| - 5.2e-07 28.3 15.4 9.5e-05 20.9 1.4 3.8 2 2 1 3 3 3 3 Organic Anion Transporter Polypeptide (OATP) family Caps_synth_CapC PF14102.6 gi|15922939|ref|NP_378608.1| - 0.057 13.9 0.1 0.057 13.9 0.1 4.8 4 1 0 4 4 4 0 Capsule biosynthesis CapC HMA PF00403.26 gi|15922940|ref|NP_378609.1| - 2.1e-09 37.7 0.2 2.9e-09 37.2 0.2 1.3 1 0 0 1 1 1 1 Heavy-metal-associated domain DUF1667 PF07892.11 gi|15922940|ref|NP_378609.1| - 0.056 13.5 0.2 0.075 13.1 0.1 1.3 1 1 0 1 1 1 0 Protein of unknown function (DUF1667) ADH_N PF08240.12 gi|15922941|ref|NP_378610.1| - 4.1e-27 94.2 0.6 1.2e-26 92.8 0.1 2.0 3 0 0 3 3 3 1 Alcohol dehydrogenase GroES-like domain ADH_zinc_N PF00107.26 gi|15922941|ref|NP_378610.1| - 9.3e-24 83.9 2.2 1.3e-23 83.4 0.2 2.1 2 1 0 2 2 2 1 Zinc-binding dehydrogenase ADH_zinc_N_2 PF13602.6 gi|15922941|ref|NP_378610.1| - 1e-09 39.5 0.0 1.8e-09 38.8 0.0 1.4 1 0 0 1 1 1 1 Zinc-binding dehydrogenase SIS_2 PF13580.6 gi|15922941|ref|NP_378610.1| - 0.0042 17.1 0.0 0.016 15.3 0.0 2.0 2 0 0 2 2 2 1 SIS domain ADH_N_2 PF16884.5 gi|15922941|ref|NP_378610.1| - 0.0048 16.8 0.2 0.15 12.0 0.0 3.1 3 1 1 4 4 4 1 N-terminal domain of oxidoreductase Pyr_redox PF00070.27 gi|15922941|ref|NP_378610.1| - 0.014 15.9 0.1 1.8 9.2 0.0 2.7 2 0 0 2 2 2 0 Pyridine nucleotide-disulphide oxidoreductase PALP PF00291.25 gi|15922941|ref|NP_378610.1| - 0.015 14.7 0.0 0.025 14.0 0.0 1.3 1 0 0 1 1 1 0 Pyridoxal-phosphate dependent enzyme TrkA_C PF02080.21 gi|15922941|ref|NP_378610.1| - 0.027 14.3 0.1 43 4.0 0.0 4.0 4 1 1 5 5 5 0 TrkA-C domain ELFV_dehydrog PF00208.21 gi|15922941|ref|NP_378610.1| - 0.12 12.0 0.1 0.18 11.5 0.1 1.2 1 0 0 1 1 1 0 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase TENA_THI-4 PF03070.16 gi|15922942|ref|NP_378611.1| - 6.4e-56 189.5 0.2 9.1e-56 189.0 0.2 1.1 1 0 0 1 1 1 1 TENA/THI-4/PQQC family zf-C2H2_9 PF16293.5 gi|15922942|ref|NP_378611.1| - 6e-31 106.1 1.7 6e-31 106.1 1.7 2.0 2 0 0 2 2 2 1 C2H2 type zinc-finger (1 copy) Haem_oxygenas_2 PF14518.6 gi|15922942|ref|NP_378611.1| - 1.2e-14 54.5 0.4 2.8e-14 53.3 0.1 1.7 2 0 0 2 2 2 1 Iron-containing redox enzyme Ta0938 PF11494.8 gi|15922943|ref|NP_378612.1| - 1.8e-55 185.6 6.9 2e-55 185.5 6.9 1.0 1 0 0 1 1 1 1 Ta0938 MttA_Hcf106 PF02416.16 gi|15922944|ref|NP_378613.1| - 3.5e-10 39.1 10.0 3.3e-09 35.9 10.0 2.0 1 1 0 1 1 1 1 mttA/Hcf106 family DUF4834 PF16118.5 gi|15922944|ref|NP_378613.1| - 0.0013 19.6 1.1 0.0019 19.1 1.1 1.2 1 0 0 1 1 1 1 Domain of unknown function (DUF4834) DUF4446 PF14584.6 gi|15922944|ref|NP_378613.1| - 0.0019 18.2 1.4 0.0025 17.8 1.4 1.2 1 0 0 1 1 1 1 Protein of unknown function (DUF4446) AAA_23 PF13476.6 gi|15922944|ref|NP_378613.1| - 0.049 14.1 8.2 0.048 14.2 8.2 1.1 1 0 0 1 1 1 0 AAA domain DUF4330 PF14221.6 gi|15922944|ref|NP_378613.1| - 0.073 13.3 0.1 0.08 13.1 0.1 1.0 1 0 0 1 1 1 0 Domain of unknown function (DUF4330) Fzo_mitofusin PF04799.13 gi|15922944|ref|NP_378613.1| - 0.085 12.4 4.6 0.1 12.2 4.6 1.2 1 0 0 1 1 1 0 fzo-like conserved region L_lactis_ph-MCP PF06673.11 gi|15922944|ref|NP_378613.1| - 0.11 11.5 2.8 0.14 11.2 2.8 1.1 1 0 0 1 1 1 0 Lactococcus lactis bacteriophage major capsid protein DUF3573 PF12097.8 gi|15922944|ref|NP_378613.1| - 0.17 10.7 1.6 0.18 10.6 1.6 1.1 1 0 0 1 1 1 0 Protein of unknown function (DUF3573) CHD5 PF04420.14 gi|15922944|ref|NP_378613.1| - 0.18 11.6 3.6 0.24 11.3 3.6 1.3 1 0 0 1 1 1 0 CHD5-like protein BRI3BP PF14965.6 gi|15922944|ref|NP_378613.1| - 0.26 10.8 4.5 0.34 10.4 2.4 1.8 1 1 1 2 2 2 0 Negative regulator of p53/TP53 DUF5320 PF17253.2 gi|15922944|ref|NP_378613.1| - 0.35 11.9 2.8 0.41 11.7 2.8 1.1 1 0 0 1 1 1 0 Family of unknown function (DUF5320) DUF16 PF01519.16 gi|15922944|ref|NP_378613.1| - 0.37 11.3 10.0 0.44 11.0 10.0 1.1 1 0 0 1 1 1 0 Protein of unknown function DUF16 TssO PF17561.2 gi|15922944|ref|NP_378613.1| - 0.85 9.7 13.9 0.14 12.2 9.3 1.8 2 0 0 2 2 2 0 Type VI secretion system, TssO DASH_Dam1 PF08653.10 gi|15922944|ref|NP_378613.1| - 1.2 8.9 3.5 4.2 7.2 0.5 2.1 2 0 0 2 2 2 0 DASH complex subunit Dam1 FUSC PF04632.12 gi|15922944|ref|NP_378613.1| - 2 6.9 4.0 1.6 7.2 3.4 1.2 1 1 0 1 1 1 0 Fusaric acid resistance protein family HNOBA PF07701.14 gi|15922944|ref|NP_378613.1| - 4.4 6.7 10.5 5.6 6.3 10.5 1.1 1 0 0 1 1 1 0 Heme NO binding associated zinc_ribbon_2 PF13240.6 gi|15922945|ref|NP_378614.1| - 1.5e-08 34.1 4.7 2.4e-08 33.4 4.7 1.4 1 0 0 1 1 1 1 zinc-ribbon domain DZR PF12773.7 gi|15922945|ref|NP_378614.1| - 8e-06 25.8 0.7 1.3e-05 25.1 0.7 1.2 1 0 0 1 1 1 1 Double zinc ribbon zf-tcix PF14952.6 gi|15922945|ref|NP_378614.1| - 3.8e-05 23.2 3.1 5.5e-05 22.7 3.1 1.3 1 0 0 1 1 1 1 Putative treble-clef, zinc-finger, Zn-binding zf-ribbon_3 PF13248.6 gi|15922945|ref|NP_378614.1| - 4.1e-05 22.8 4.9 6e-05 22.3 4.9 1.3 1 0 0 1 1 1 1 zinc-ribbon domain zf-RanBP PF00641.18 gi|15922945|ref|NP_378614.1| - 0.00022 20.5 1.2 0.00033 19.9 1.2 1.2 1 0 0 1 1 1 1 Zn-finger in Ran binding protein and others DUF2116 PF09889.9 gi|15922945|ref|NP_378614.1| - 0.0077 16.2 0.5 0.019 15.0 0.5 1.6 1 0 0 1 1 1 1 Uncharacterized protein containing a Zn-ribbon (DUF2116) zinc_ribbon_15 PF17032.5 gi|15922945|ref|NP_378614.1| - 0.033 15.0 2.3 0.065 14.0 2.3 1.5 1 0 0 1 1 1 0 zinc-ribbon family zf_C2H2_10 PF18414.1 gi|15922945|ref|NP_378614.1| - 0.12 11.9 1.9 0.26 10.9 1.9 1.5 1 0 0 1 1 1 0 C2H2 type zinc-finger UPF0547 PF10571.9 gi|15922945|ref|NP_378614.1| - 0.14 12.3 4.7 0.95 9.6 0.4 2.1 1 1 1 2 2 2 0 Uncharacterised protein family UPF0547 Podoplanin PF05808.11 gi|15922945|ref|NP_378614.1| - 0.27 11.3 3.3 0.57 10.3 3.3 1.5 1 0 0 1 1 1 0 Podoplanin Nudix_N_2 PF14803.6 gi|15922945|ref|NP_378614.1| - 0.28 11.2 2.6 2.1 8.3 0.4 2.3 2 0 0 2 2 2 0 Nudix N-terminal DUF608 PF04685.13 gi|15922946|ref|NP_378615.1| - 1.5e-58 198.7 0.0 3e-57 194.4 0.0 2.1 1 1 0 1 1 1 1 Glycosyl-hydrolase family 116, catalytic region Glyco_hydr_116N PF12215.8 gi|15922946|ref|NP_378615.1| - 1.8e-21 76.9 0.0 4e-21 75.8 0.0 1.6 1 1 0 1 1 1 1 beta-glucosidase 2, glycosyl-hydrolase family 116 N-term Bac_rhamnosid6H PF17389.2 gi|15922946|ref|NP_378615.1| - 0.0077 15.5 0.1 0.013 14.7 0.1 1.3 1 0 0 1 1 1 1 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain GDE_C PF06202.14 gi|15922946|ref|NP_378615.1| - 0.59 9.0 2.2 2.4 7.0 0.2 2.3 2 1 1 3 3 3 0 Amylo-alpha-1,6-glucosidase MFS_1 PF07690.16 gi|15922947|ref|NP_378616.1| - 1e-16 60.8 40.2 5e-09 35.5 15.9 2.0 2 0 0 2 2 2 2 Major Facilitator Superfamily DUF423 PF04241.15 gi|15922947|ref|NP_378616.1| - 0.014 15.6 0.6 0.014 15.6 0.6 2.9 3 2 1 4 4 4 0 Protein of unknown function (DUF423) Pro-kuma_activ PF09286.11 gi|15922948|ref|NP_378617.1| - 6.2e-28 97.9 0.0 1e-27 97.2 0.0 1.3 1 0 0 1 1 1 1 Pro-kumamolisin, activation domain FR47 PF08445.10 gi|15922949|ref|NP_378618.1| - 2.1e-29 101.3 0.1 4.2e-29 100.4 0.1 1.5 1 0 0 1 1 1 1 FR47-like protein Acetyltransf_1 PF00583.25 gi|15922949|ref|NP_378618.1| - 3.3e-11 43.4 0.2 9.1e-11 42.0 0.0 1.8 2 1 0 2 2 2 1 Acetyltransferase (GNAT) family Acetyltransf_10 PF13673.7 gi|15922949|ref|NP_378618.1| - 6.5e-08 32.6 0.0 4.8e-07 29.8 0.0 2.0 1 1 1 2 2 2 1 Acetyltransferase (GNAT) domain GNAT_acetyltran PF12746.7 gi|15922949|ref|NP_378618.1| - 8.6e-07 28.8 0.0 1.3e-06 28.2 0.0 1.2 1 0 0 1 1 1 1 GNAT acetyltransferase Acetyltransf_7 PF13508.7 gi|15922949|ref|NP_378618.1| - 3.6e-05 24.1 0.0 7.1e-05 23.2 0.0 1.6 1 1 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_3 PF13302.7 gi|15922949|ref|NP_378618.1| - 0.00039 21.1 0.0 0.0006 20.5 0.0 1.3 1 0 0 1 1 1 1 Acetyltransferase (GNAT) domain Acetyltransf_9 PF13527.7 gi|15922949|ref|NP_378618.1| - 0.011 15.8 0.0 0.029 14.5 0.0 1.9 1 1 0 1 1 1 0 Acetyltransferase (GNAT) domain Acetyltransf_8 PF13523.6 gi|15922949|ref|NP_378618.1| - 0.13 12.0 0.0 0.23 11.1 0.0 1.4 1 0 0 1 1 1 0 Acetyltransferase (GNAT) domain PaREP1 PF05942.11 gi|15922951|ref|NP_378620.1| - 6.9e-21 74.3 0.0 1.2e-20 73.6 0.0 1.4 1 0 0 1 1 1 1 Archaeal PaREP1/PaREP8 family DUF2981 PF11200.8 gi|15922952|ref|NP_378621.1| - 1.5 8.5 4.5 2.2 8.0 4.5 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF2981) Thermopsin PF05317.11 gi|15922953|ref|NP_378622.1| - 1.3e-82 277.2 29.9 1.3e-82 277.2 29.9 4.1 4 1 0 4 4 4 1 Thermopsin DUF973 PF06157.11 gi|15922954|ref|NP_378623.1| - 4.2e-07 29.3 29.7 7.2e-07 28.5 29.7 1.3 1 1 0 1 1 1 1 Protein of unknown function (DUF973) DUF4342 PF14242.6 gi|15922954|ref|NP_378623.1| - 0.36 10.9 4.1 0.54 10.3 1.7 2.4 2 0 0 2 2 2 0 Domain of unknown function (DUF4342) Cortexin PF11057.8 gi|15922954|ref|NP_378623.1| - 0.64 9.9 2.6 1.6 8.6 2.6 1.6 1 0 0 1 1 1 0 Cortexin of kidney MFS_1 PF07690.16 gi|15922956|ref|NP_378625.1| - 2.9e-25 89.0 44.5 2.9e-25 89.0 44.5 2.1 1 1 1 2 2 2 1 Major Facilitator Superfamily Sugar_tr PF00083.24 gi|15922956|ref|NP_378625.1| - 4.1e-22 78.7 28.6 3.5e-18 65.7 7.5 2.2 2 0 0 2 2 2 2 Sugar (and other) transporter TraL PF07178.11 gi|15922957|ref|NP_378626.1| - 1.4 9.4 5.4 0.46 11.0 1.8 1.8 1 1 1 2 2 2 0 TraL protein HEPN PF05168.14 gi|15922958|ref|NP_378627.1| - 9.3e-27 93.5 0.5 1e-26 93.4 0.5 1.0 1 0 0 1 1 1 1 HEPN domain Herpes_teg_N PF04843.12 gi|15922958|ref|NP_378627.1| - 0.12 12.0 0.0 0.15 11.8 0.0 1.1 1 0 0 1 1 1 0 Herpesvirus tegument protein, N-terminal conserved region HAD_2 PF13419.6 gi|15922960|ref|NP_378629.1| - 5.6e-15 55.9 0.0 9.1e-15 55.2 0.0 1.4 1 0 0 1 1 1 1 Haloacid dehalogenase-like hydrolase Hydrolase PF00702.26 gi|15922960|ref|NP_378629.1| - 3.1e-08 34.1 0.0 4.6e-07 30.3 0.0 2.4 2 1 0 2 2 2 1 haloacid dehalogenase-like hydrolase Hydrolase_6 PF13344.6 gi|15922960|ref|NP_378629.1| - 0.17 12.0 0.0 0.95 9.6 0.0 2.1 3 0 0 3 3 3 0 Haloacid dehalogenase-like hydrolase DUF1700 PF08006.11 gi|15922961|ref|NP_378630.1| - 0.012 15.2 5.3 0.018 14.6 5.3 1.2 1 0 0 1 1 1 0 Protein of unknown function (DUF1700) MS_channel PF00924.18 gi|15922961|ref|NP_378630.1| - 0.28 10.7 7.2 0.13 11.7 4.5 1.8 2 0 0 2 2 2 0 Mechanosensitive ion channel PQQ_2 PF13360.6 gi|15922962|ref|NP_378631.1| - 3e-08 33.5 0.0 1.3e-06 28.2 0.0 3.4 3 1 0 3 3 3 1 PQQ-like domain NHL PF01436.21 gi|15922962|ref|NP_378631.1| - 3.2e-06 26.9 26.4 0.058 13.5 0.1 9.2 11 1 1 12 12 12 4 NHL repeat Arylesterase PF01731.20 gi|15922962|ref|NP_378631.1| - 0.0041 17.3 17.1 3.7 7.8 0.1 7.9 5 4 3 8 8 8 1 Arylesterase DUF5128 PF17170.4 gi|15922962|ref|NP_378631.1| - 0.014 14.6 2.4 0.021 14.0 0.2 2.4 3 0 0 3 3 3 0 6-bladed beta-propeller Lactonase PF10282.9 gi|15922962|ref|NP_378631.1| - 0.018 14.3 15.5 0.035 13.4 1.3 4.6 3 2 2 5 5 5 0 Lactonase, 7-bladed beta-propeller TMEM154 PF15102.6 gi|15922962|ref|NP_378631.1| - 0.89 9.5 6.7 1.5 8.7 6.7 1.3 1 0 0 1 1 1 0 TMEM154 protein family DUF2283 PF10049.9 gi|15922962|ref|NP_378631.1| - 2.3 8.5 6.3 1.2 9.4 0.1 3.6 4 0 0 4 4 4 0 Protein of unknown function (DUF2283) IMP_cyclohyd PF07826.11 gi|15922963|ref|NP_378632.1| - 0.0014 18.3 0.1 0.002 17.7 0.1 1.2 1 0 0 1 1 1 1 IMP cyclohydrolase-like protein Cyclin PF08613.11 gi|15922963|ref|NP_378632.1| - 0.077 13.4 0.1 0.36 11.2 0.0 1.9 2 0 0 2 2 2 0 Cyclin Thermopsin PF05317.11 gi|15922965|ref|NP_378634.1| - 1.4e-80 270.5 21.6 1.4e-80 270.5 21.6 3.4 2 2 1 4 4 4 1 Thermopsin PKD_3 PF16820.5 gi|15922965|ref|NP_378634.1| - 1e-07 31.6 1.8 4.6e-06 26.3 0.1 3.5 2 1 1 3 3 3 1 PKD-like domain BiPBP_C PF06832.12 gi|15922965|ref|NP_378634.1| - 0.00017 21.6 0.0 15 5.7 0.0 3.9 3 0 0 3 3 3 2 Penicillin-Binding Protein C-terminus Family SprB PF13573.6 gi|15922965|ref|NP_378634.1| - 0.0011 18.7 14.7 0.021 14.6 0.6 4.4 3 0 0 3 3 3 2 SprB repeat DUF5011 PF16403.5 gi|15922965|ref|NP_378634.1| - 0.0054 16.8 8.5 0.98 9.6 0.1 3.7 3 0 0 3 3 3 2 Domain of unknown function (DUF5011) PKD PF00801.20 gi|15922965|ref|NP_378634.1| - 0.0063 16.3 7.1 0.4 10.6 0.5 3.6 3 0 0 3 3 3 2 PKD domain Cadherin-like PF12733.7 gi|15922965|ref|NP_378634.1| - 0.018 15.5 0.2 0.018 15.5 0.2 5.9 5 1 1 6 6 6 0 Cadherin-like beta sandwich domain TFIIA_gamma_C PF02751.14 gi|15922965|ref|NP_378634.1| - 0.04 14.1 0.0 0.14 12.3 0.0 1.9 1 0 0 1 1 1 0 Transcription initiation factor IIA, gamma subunit HYR PF02494.16 gi|15922965|ref|NP_378634.1| - 0.77 10.1 3.0 1.7 9.0 0.3 2.8 3 0 0 3 3 3 0 HYR domain PIG-Y PF15159.6 gi|15922966|ref|NP_378635.1| - 0.068 14.1 2.6 0.068 14.1 2.6 2.6 2 1 0 2 2 2 0 Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y ATP-synt_J PF04911.12 gi|15922966|ref|NP_378635.1| - 0.78 9.4 3.0 9.2 5.9 0.6 2.3 2 0 0 2 2 2 0 ATP synthase j chain AflR PF08493.10 gi|15922971|ref|NP_378640.1| - 0.0012 18.4 0.0 0.0013 18.3 0.0 1.2 1 0 0 1 1 1 1 Aflatoxin regulatory protein SMC_ScpB PF04079.16 gi|15922973|ref|NP_378642.1| - 0.0052 16.4 0.2 0.011 15.3 0.2 1.6 1 1 0 1 1 1 1 Segregation and condensation complex subunit ScpB Cas_Cas02710 PF09670.10 gi|15922973|ref|NP_378642.1| - 0.01 14.6 0.6 0.18 10.6 0.1 2.1 1 1 0 2 2 2 0 CRISPR-associated protein (Cas_Cas02710) HTH_24 PF13412.6 gi|15922973|ref|NP_378642.1| - 0.12 12.0 0.0 0.28 10.8 0.0 1.6 1 0 0 1 1 1 0 Winged helix-turn-helix DNA-binding Csa1 PF06023.12 gi|15922974|ref|NP_378643.1| - 6.2e-82 275.2 0.0 6.9e-82 275.1 0.0 1.0 1 0 0 1 1 1 1 CRISPR-associated exonuclease Csa1 PDDEXK_1 PF12705.7 gi|15922974|ref|NP_378643.1| - 1.8e-08 34.6 0.0 2.5e-08 34.1 0.0 1.2 1 0 0 1 1 1 1 PD-(D/E)XK nuclease superfamily Cas_Cas1 PF01867.16 gi|15922975|ref|NP_378644.1| - 2.4e-52 177.9 0.0 4.3e-28 98.3 0.0 2.1 2 0 0 2 2 2 2 CRISPR associated protein Cas1 CRISPR_Cas2 PF09827.9 gi|15922976|ref|NP_378645.1| - 2.4e-17 62.9 0.1 3e-17 62.6 0.1 1.1 1 0 0 1 1 1 1 CRISPR associated protein Cas2 Cas_Cas4 PF01930.17 gi|15922977|ref|NP_378646.1| - 5.1e-20 72.2 2.0 5.9e-20 72.0 2.0 1.0 1 0 0 1 1 1 1 Domain of unknown function DUF83 PDDEXK_1 PF12705.7 gi|15922977|ref|NP_378646.1| - 2.4e-10 40.7 0.4 2.1e-09 37.6 0.3 1.9 1 1 1 2 2 2 1 PD-(D/E)XK nuclease superfamily HSDR_N_2 PF13588.6 gi|15922977|ref|NP_378646.1| - 0.048 13.7 0.0 0.1 12.6 0.0 1.7 1 1 0 1 1 1 0 Type I restriction enzyme R protein N terminus (HSDR_N) Cas_Csa5 PF09702.10 gi|15922980|ref|NP_378649.1| - 1.6e-53 179.4 0.8 2.3e-53 179.0 0.8 1.2 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Csa5) DevR PF01905.16 gi|15922981|ref|NP_378650.1| - 1.5e-77 260.3 0.0 1.8e-77 260.1 0.0 1.0 1 0 0 1 1 1 1 CRISPR-associated negative auto-regulator DevR/Csa2 PFK PF00365.20 gi|15922981|ref|NP_378650.1| - 0.12 11.6 0.0 0.18 11.1 0.0 1.2 1 0 0 1 1 1 0 Phosphofructokinase Cas_Cas5d PF09704.10 gi|15922982|ref|NP_378651.1| - 8.9e-08 32.3 0.0 1.2e-07 31.9 0.0 1.2 1 0 0 1 1 1 1 CRISPR-associated protein (Cas_Cas5) DUF4537 PF15057.6 gi|15922982|ref|NP_378651.1| - 0.062 13.3 0.1 0.12 12.4 0.1 1.5 1 1 0 1 1 1 0 Domain of unknown function (DUF4537) DEAD PF00270.29 gi|15922983|ref|NP_378652.1| - 4.1e-10 39.7 0.1 2e-09 37.4 0.0 2.1 2 1 0 2 2 2 1 DEAD/DEAH box helicase Helicase_C PF00271.31 gi|15922983|ref|NP_378652.1| - 1.3e-09 38.4 0.3 4.7e-09 36.6 0.1 2.1 2 1 0 2 2 2 1 Helicase conserved C-terminal domain ResIII PF04851.15 gi|15922983|ref|NP_378652.1| - 4.7e-07 30.0 0.0 9.9e-07 28.9 0.0 1.5 1 0 0 1 1 1 1 Type III restriction enzyme, res subunit RuvB_N PF05496.12 gi|15922983|ref|NP_378652.1| - 0.0027 17.5 0.0 0.0061 16.3 0.0 1.6 1 0 0 1 1 1 1 Holliday junction DNA helicase RuvB P-loop domain Oxidored_nitro PF00148.19 gi|15922983|ref|NP_378652.1| - 0.012 14.4 0.0 0.018 13.8 0.0 1.3 1 0 0 1 1 1 0 Nitrogenase component 1 type Oxidoreductase TsaE PF02367.17 gi|15922983|ref|NP_378652.1| - 0.017 15.2 0.0 0.04 13.9 0.0 1.6 1 0 0 1 1 1 0 Threonylcarbamoyl adenosine biosynthesis protein TsaE IstB_IS21 PF01695.17 gi|15922983|ref|NP_378652.1| - 0.018 14.8 0.0 0.039 13.7 0.0 1.6 1 0 0 1 1 1 0 IstB-like ATP binding protein IF-2B PF01008.17 gi|15922983|ref|NP_378652.1| - 0.033 13.4 0.1 3.7 6.7 0.0 2.5 2 1 1 3 3 3 0 Initiation factor 2 subunit family AAA PF00004.29 gi|15922983|ref|NP_378652.1| - 0.046 14.1 0.1 0.37 11.2 0.1 2.3 1 1 0 1 1 1 0 ATPase family associated with various cellular activities (AAA) AAA_22 PF13401.6 gi|15922983|ref|NP_378652.1| - 0.08 13.2 0.0 0.71 10.1 0.0 2.4 1 1 0 1 1 1 0 AAA domain AAA_16 PF13191.6 gi|15922983|ref|NP_378652.1| - 0.11 12.9 0.0 0.88 9.9 0.0 2.3 1 1 0 1 1 1 0 AAA ATPase domain ABC_tran PF00005.27 gi|15922983|ref|NP_378652.1| - 0.14 12.7 0.0 0.87 10.1 0.0 2.2 2 0 0 2 2 2 0 ABC transporter HD PF01966.22 gi|15922984|ref|NP_378653.1| - 0.00067 19.9 0.0 0.00092 19.4 0.0 1.4 1 0 0 1 1 1 1 HD domain HD_6 PF18019.1 gi|15922984|ref|NP_378653.1| - 0.0064 16.6 0.0 0.0078 16.4 0.0 1.2 1 0 0 1 1 1 1 HD domain Cas6_N PF17952.1 gi|15922986|ref|NP_378655.1| - 2.7e-28 98.5 0.5 5.2e-28 97.6 0.2 1.7 2 0 0 2 2 2 1 Cas6 N-terminal domain CRISPR_Cas6 PF10040.9 gi|15922986|ref|NP_378655.1| - 2.5e-13 50.5 0.1 6.4e-13 49.2 0.0 1.7 2 0 0 2 2 2 1 CRISPR-associated endoribonuclease Cas6 # # Program: hmmscan # Version: 3.2.1 (June 2018) # Pipeline mode: SCAN # Query file: /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Crenarchaeota/Sulfolobus_tokodaii_7_uid57807/NC_003106.faa # Target file: /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm # Option settings: /oak/stanford/groups/akundaje/marinovg/programs/hmmer-3.2.1/bin/hmmscan -o /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Crenarchaeota/Sulfolobus_tokodaii_7_uid57807/NC_003106.PFam32-A --tblout /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Crenarchaeota/Sulfolobus_tokodaii_7_uid57807/NC_003106.PFam32-A.tblout --cpu 20 /oak/stanford/groups/akundaje/marinovg/genomes/PFam/PFam32.0/Pfam-A.hmm /oak/stanford/groups/akundaje/marinovg/genomes/Archaea/Crenarchaeota/Sulfolobus_tokodaii_7_uid57807/NC_003106.faa # Current dir: /oak/stanford/groups/akundaje/marinovg/genomes # Date: Mon Mar 25 12:12:38 2019 # [ok]