#                                                                           --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
# target name        accession  query name                       accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target
#------------------- ----------             -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------
VIT1	PF01988.14	gi|479324432|ref|YP_007864480.1|	-	9.6	5.6	10.0	13	5.2	6.9	1.4	1	1	0	1	1	1	0	VIT	family
Cdc6_C	PF09079.6	gi|479324433|ref|YP_007864481.1|	-	3.8e-18	64.9	0.0	9.2e-18	63.7	0.0	1.6	1	0	0	1	1	1	1	CDC6,	C	terminal
AAA_22	PF13401.1	gi|479324433|ref|YP_007864481.1|	-	7.3e-09	35.8	0.0	3.7e-08	33.5	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
AAA	PF00004.24	gi|479324433|ref|YP_007864481.1|	-	1.7e-05	25.0	0.0	3.9e-05	23.8	0.0	1.7	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sigma54_activat	PF00158.21	gi|479324433|ref|YP_007864481.1|	-	0.0097	15.3	0.0	0.024	14.0	0.0	1.7	1	1	0	1	1	1	1	Sigma-54	interaction	domain
DUF2075	PF09848.4	gi|479324433|ref|YP_007864481.1|	-	0.038	12.9	0.0	0.063	12.2	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
KNOX1	PF03790.8	gi|479324433|ref|YP_007864481.1|	-	0.11	11.8	0.0	0.25	10.7	0.0	1.6	1	0	0	1	1	1	0	KNOX1	domain
TMF_DNA_bd	PF12329.3	gi|479324434|ref|YP_007864482.1|	-	0.00022	20.9	13.0	0.021	14.6	0.3	2.1	2	0	0	2	2	2	2	TATA	element	modulatory	factor	1	DNA	binding
DivIC	PF04977.10	gi|479324434|ref|YP_007864482.1|	-	0.0004	19.8	5.0	0.086	12.3	0.1	2.1	2	0	0	2	2	2	2	Septum	formation	initiator
DUF4201	PF13870.1	gi|479324434|ref|YP_007864482.1|	-	0.00065	19.1	6.6	0.048	13.0	0.1	2.0	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF4201)
FlaC_arch	PF05377.6	gi|479324434|ref|YP_007864482.1|	-	0.0042	16.9	5.7	0.028	14.3	0.1	2.2	2	0	0	2	2	2	1	Flagella	accessory	protein	C	(FlaC)
GAS	PF13851.1	gi|479324434|ref|YP_007864482.1|	-	0.0042	16.3	4.5	0.24	10.5	0.1	2.0	2	0	0	2	2	2	2	Growth-arrest	specific	micro-tubule	binding
DUF4200	PF13863.1	gi|479324434|ref|YP_007864482.1|	-	0.0075	16.2	10.3	0.095	12.6	0.9	2.1	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF4200)
DUF2031	PF09592.5	gi|479324434|ref|YP_007864482.1|	-	0.0075	15.4	0.6	0.0075	15.4	0.4	2.0	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2031)
NPV_P10	PF05531.7	gi|479324434|ref|YP_007864482.1|	-	0.0099	16.1	0.2	1.4	9.2	0.1	2.1	2	0	0	2	2	2	1	Nucleopolyhedrovirus	P10	protein
Occludin_ELL	PF07303.8	gi|479324434|ref|YP_007864482.1|	-	0.013	16.1	6.1	0.064	13.9	2.9	2.1	1	1	1	2	2	2	0	Occludin	homology	domain
DUF964	PF06133.6	gi|479324434|ref|YP_007864482.1|	-	0.015	15.2	1.4	0.13	12.2	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF964)
BLOC1_2	PF10046.4	gi|479324434|ref|YP_007864482.1|	-	0.016	15.3	3.9	2.1	8.5	0.7	2.1	2	0	0	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
IncA	PF04156.9	gi|479324434|ref|YP_007864482.1|	-	0.017	14.7	7.8	0.025	14.1	5.4	1.3	1	1	0	1	1	1	0	IncA	protein
DUF972	PF06156.8	gi|479324434|ref|YP_007864482.1|	-	0.021	15.1	6.4	0.48	10.7	0.2	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF972)
Spc24	PF08286.6	gi|479324434|ref|YP_007864482.1|	-	0.029	14.0	2.9	0.87	9.3	0.1	2.1	2	0	0	2	2	2	0	Spc24	subunit	of	Ndc80
Nup54	PF13874.1	gi|479324434|ref|YP_007864482.1|	-	0.03	13.9	2.8	1.5	8.4	0.3	2.1	2	0	0	2	2	2	0	Nucleoporin	complex	subunit	54
Med4	PF10018.4	gi|479324434|ref|YP_007864482.1|	-	0.03	13.6	3.1	2	7.8	0.0	2.0	2	0	0	2	2	2	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
MscS_porin	PF12795.2	gi|479324434|ref|YP_007864482.1|	-	0.032	13.5	1.7	1.3	8.3	0.0	2.0	2	0	0	2	2	2	0	Mechanosensitive	ion	channel	porin	domain
DUF3375	PF11855.3	gi|479324434|ref|YP_007864482.1|	-	0.037	12.7	1.0	0.037	12.7	0.7	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3375)
CENP-F_leu_zip	PF10473.4	gi|479324434|ref|YP_007864482.1|	-	0.038	13.8	0.9	0.038	13.8	0.6	2.2	1	1	0	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Vac_Fusion	PF02346.11	gi|479324434|ref|YP_007864482.1|	-	0.039	13.3	3.8	0.35	10.3	0.1	2.3	2	0	0	2	2	2	0	Chordopoxvirus	fusion	protein
Prefoldin_2	PF01920.15	gi|479324434|ref|YP_007864482.1|	-	0.041	13.6	11.3	0.083	12.6	1.0	2.2	2	0	0	2	2	2	0	Prefoldin	subunit
Prefoldin	PF02996.12	gi|479324434|ref|YP_007864482.1|	-	0.041	13.5	7.7	0.37	10.4	0.2	2.1	2	0	0	2	2	2	0	Prefoldin	subunit
TACC	PF05010.9	gi|479324434|ref|YP_007864482.1|	-	0.048	13.4	0.5	0.048	13.4	0.4	2.0	2	0	0	2	2	2	0	Transforming	acidic	coiled-coil-containing	protein	(TACC)
DUF155	PF02582.9	gi|479324434|ref|YP_007864482.1|	-	0.05	13.5	0.5	0.087	12.7	0.3	1.3	1	1	0	1	1	1	0	Uncharacterised	ACR,	YagE	family	COG1723
bZIP_1	PF00170.16	gi|479324434|ref|YP_007864482.1|	-	0.051	13.5	13.2	0.62	10.0	1.1	2.2	2	0	0	2	2	2	0	bZIP	transcription	factor
DUF2730	PF10805.3	gi|479324434|ref|YP_007864482.1|	-	0.053	13.2	3.8	4	7.2	0.1	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2730)
Spc7	PF08317.6	gi|479324434|ref|YP_007864482.1|	-	0.059	12.0	4.1	1.2	7.7	0.4	2.0	2	0	0	2	2	2	0	Spc7	kinetochore	protein
AKNA	PF12443.3	gi|479324434|ref|YP_007864482.1|	-	0.065	13.2	3.2	0.19	11.7	0.0	2.0	2	0	0	2	2	2	0	AT-hook-containing	transcription	factor
Seryl_tRNA_N	PF02403.17	gi|479324434|ref|YP_007864482.1|	-	0.065	13.2	6.8	1.8	8.5	1.0	2.1	2	0	0	2	2	2	0	Seryl-tRNA	synthetase	N-terminal	domain
DUF2681	PF10883.3	gi|479324434|ref|YP_007864482.1|	-	0.068	13.3	3.1	3.2	8.0	0.2	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2681)
CCDC-167	PF15188.1	gi|479324434|ref|YP_007864482.1|	-	0.071	13.0	5.0	0.1	12.5	0.2	2.3	2	0	0	2	2	2	0	Coiled-coil	domain-containing	protein	167
Ax_dynein_light	PF10211.4	gi|479324434|ref|YP_007864482.1|	-	0.075	12.8	6.0	0.56	10.0	0.2	2.0	2	0	0	2	2	2	0	Axonemal	dynein	light	chain
Fib_alpha	PF08702.5	gi|479324434|ref|YP_007864482.1|	-	0.077	13.1	2.4	0.21	11.6	1.7	1.7	1	1	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
DUF1319	PF07028.6	gi|479324434|ref|YP_007864482.1|	-	0.085	13.0	6.0	1.8	8.7	0.2	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1319)
Snapin_Pallidin	PF14712.1	gi|479324434|ref|YP_007864482.1|	-	0.089	13.1	1.8	4.6	7.6	0.0	2.2	2	0	0	2	2	2	0	Snapin/Pallidin
DUF3373	PF11853.3	gi|479324434|ref|YP_007864482.1|	-	0.099	11.1	2.7	0.57	8.6	0.7	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3373)
DUF4140	PF13600.1	gi|479324434|ref|YP_007864482.1|	-	0.11	12.9	4.0	3.1	8.2	0.3	2.1	2	0	0	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
Uds1	PF15456.1	gi|479324434|ref|YP_007864482.1|	-	0.11	12.4	3.5	1	9.3	0.3	2.1	2	0	0	2	2	2	0	Up-regulated	During	Septation
Rop-like	PF05082.8	gi|479324434|ref|YP_007864482.1|	-	0.13	11.7	1.4	0.4	10.1	0.0	2.2	2	0	0	2	2	2	0	Rop-like
Laminin_II	PF06009.7	gi|479324434|ref|YP_007864482.1|	-	0.13	12.0	3.8	0.6	9.8	2.6	1.9	1	1	0	1	1	1	0	Laminin	Domain	II
Nsp1_C	PF05064.8	gi|479324434|ref|YP_007864482.1|	-	0.17	11.5	4.7	2.6	7.7	0.5	2.1	2	0	0	2	2	2	0	Nsp1-like	C-terminal	region
MutS_IV	PF05190.13	gi|479324434|ref|YP_007864482.1|	-	0.18	12.0	9.6	0.42	10.8	0.7	2.1	2	0	0	2	2	2	0	MutS	family	domain	IV
ATG16	PF08614.6	gi|479324434|ref|YP_007864482.1|	-	0.2	11.4	6.0	2.4	7.9	0.4	2.0	2	0	0	2	2	2	0	Autophagy	protein	16	(ATG16)
DUF342	PF03961.8	gi|479324434|ref|YP_007864482.1|	-	0.22	9.9	8.2	0.47	8.8	5.7	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
COG2	PF06148.6	gi|479324434|ref|YP_007864482.1|	-	0.23	11.3	1.7	1.7	8.5	0.1	2.1	2	0	0	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
DUF2951	PF11166.3	gi|479324434|ref|YP_007864482.1|	-	0.28	11.0	5.0	1.5	8.7	1.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2951)
Mnd1	PF03962.10	gi|479324434|ref|YP_007864482.1|	-	0.3	10.7	5.7	2.5	7.7	3.9	2.0	1	1	0	1	1	1	0	Mnd1	family
DUF4298	PF14131.1	gi|479324434|ref|YP_007864482.1|	-	0.31	10.9	4.4	0.79	9.6	0.8	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4298)
DUF904	PF06005.7	gi|479324434|ref|YP_007864482.1|	-	0.33	11.2	8.6	1.2	9.5	0.4	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF904)
FlxA	PF14282.1	gi|479324434|ref|YP_007864482.1|	-	0.5	10.3	3.0	6.3	6.8	0.0	2.1	2	0	0	2	2	2	0	FlxA-like	protein
DASH_Spc34	PF08657.5	gi|479324434|ref|YP_007864482.1|	-	0.51	9.9	5.5	0.27	10.8	0.4	2.0	1	1	1	2	2	2	0	DASH	complex	subunit	Spc34
DUF3007	PF11460.3	gi|479324434|ref|YP_007864482.1|	-	0.51	10.4	4.2	0.74	9.9	0.3	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3007)
DUF2205	PF10224.4	gi|479324434|ref|YP_007864482.1|	-	0.52	9.9	7.9	1.4	8.5	0.3	2.4	2	1	0	2	2	2	0	Predicted	coiled-coil	protein	(DUF2205)
SYCE1	PF15233.1	gi|479324434|ref|YP_007864482.1|	-	0.52	10.2	7.3	2.7	7.9	0.8	2.1	2	0	0	2	2	2	0	Synaptonemal	complex	central	element	protein	1
TBPIP	PF07106.8	gi|479324434|ref|YP_007864482.1|	-	0.66	9.4	10.1	0.39	10.2	0.1	2.3	2	1	1	3	3	2	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
Syntaxin-6_N	PF09177.6	gi|479324434|ref|YP_007864482.1|	-	0.78	10.1	5.7	5.4	7.4	0.4	2.2	1	1	1	2	2	2	0	Syntaxin	6,	N-terminal
NBP1	PF08537.5	gi|479324434|ref|YP_007864482.1|	-	0.99	8.5	7.6	4.2	6.4	0.8	2.0	2	0	0	2	2	2	0	Fungal	Nap	binding	protein	NBP1
Rho_Binding	PF08912.6	gi|479324434|ref|YP_007864482.1|	-	1	9.7	7.8	3.7	7.9	1.3	2.4	2	0	0	2	2	2	0	Rho	Binding
DUF1192	PF06698.6	gi|479324434|ref|YP_007864482.1|	-	1	9.2	9.7	1.3	8.9	1.6	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1192)
Cep57_CLD_2	PF14197.1	gi|479324434|ref|YP_007864482.1|	-	1.1	9.1	8.2	2.8	7.9	0.4	2.2	2	0	0	2	2	2	0	Centrosome	localisation	domain	of	PPC89
UPF0449	PF15136.1	gi|479324434|ref|YP_007864482.1|	-	1.2	9.3	5.5	4.8	7.4	0.4	2.1	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0449
DUF3166	PF11365.3	gi|479324434|ref|YP_007864482.1|	-	1.2	9.5	6.1	3.8	8.0	0.4	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3166)
Pox_A_type_inc	PF04508.7	gi|479324434|ref|YP_007864482.1|	-	1.4	8.8	18.4	0.69	9.8	1.6	4.1	2	2	1	3	3	3	0	Viral	A-type	inclusion	protein	repeat
Fmp27_WPPW	PF10359.4	gi|479324434|ref|YP_007864482.1|	-	1.5	7.1	5.1	3.2	6.0	3.5	1.5	1	1	0	1	1	1	0	RNA	pol	II	promoter	Fmp27	protein	domain
DivIVA	PF05103.8	gi|479324434|ref|YP_007864482.1|	-	1.6	8.8	7.3	7.7	6.5	0.9	2.1	2	0	0	2	2	2	0	DivIVA	protein
CENP-Q	PF13094.1	gi|479324434|ref|YP_007864482.1|	-	1.6	8.6	6.5	3.7	7.5	4.5	1.5	1	1	0	1	1	1	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
DUF1049	PF06305.6	gi|479324434|ref|YP_007864482.1|	-	1.6	8.2	5.0	2.8	7.4	0.2	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1049)
Atg14	PF10186.4	gi|479324434|ref|YP_007864482.1|	-	2	7.2	9.1	4.5	6.1	6.3	1.5	1	1	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
DUF4618	PF15397.1	gi|479324434|ref|YP_007864482.1|	-	2.6	7.3	7.9	5.5	6.2	0.7	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4618)
CorA	PF01544.13	gi|479324434|ref|YP_007864482.1|	-	2.8	6.8	5.1	4.7	6.1	3.5	1.4	1	1	0	1	1	1	0	CorA-like	Mg2+	transporter	protein
DMPK_coil	PF08826.5	gi|479324434|ref|YP_007864482.1|	-	2.9	7.8	10.3	2.6	8.0	1.7	2.3	2	0	0	2	2	2	0	DMPK	coiled	coil	domain	like
NTR2	PF15458.1	gi|479324434|ref|YP_007864482.1|	-	3.6	6.7	9.0	5.8	6.0	1.7	2.0	2	0	0	2	2	2	0	Nineteen	complex-related	protein	2
PspB	PF06667.7	gi|479324434|ref|YP_007864482.1|	-	3.8	7.5	7.6	1.1	9.1	1.0	2.1	2	0	0	2	2	2	0	Phage	shock	protein	B
DUF641	PF04859.7	gi|479324434|ref|YP_007864482.1|	-	4.5	7.0	6.4	5	6.8	0.6	2.0	2	0	0	2	2	2	0	Plant	protein	of	unknown	function	(DUF641)
XhlA	PF10779.4	gi|479324434|ref|YP_007864482.1|	-	6.3	6.7	8.4	3.6	7.5	0.2	2.3	2	0	0	2	2	2	0	Haemolysin	XhlA
zf-C4H2	PF10146.4	gi|479324434|ref|YP_007864482.1|	-	7.2	6.5	7.6	13	5.7	0.3	2.0	2	0	0	2	2	2	0	Zinc	finger-containing	protein
APG6	PF04111.7	gi|479324434|ref|YP_007864482.1|	-	9.9	5.0	11.2	1.5e+02	1.2	7.9	1.9	1	1	0	1	1	1	0	Autophagy	protein	Apg6
TM_helix	PF05552.7	gi|479324435|ref|YP_007864483.1|	-	4e-21	74.4	6.6	7.2e-12	44.7	1.0	5.5	6	1	0	6	6	6	2	Conserved	TM	helix
Colicin_V	PF02674.11	gi|479324435|ref|YP_007864483.1|	-	3.4	7.5	43.5	0.99	9.2	7.2	4.2	1	1	2	4	4	4	0	Colicin	V	production	protein
Pterin_4a	PF01329.14	gi|479324436|ref|YP_007864484.1|	-	1.6e-25	88.7	0.0	1.8e-25	88.4	0.0	1.0	1	0	0	1	1	1	1	Pterin	4	alpha	carbinolamine	dehydratase
HmuY	PF14064.1	gi|479324438|ref|YP_007864486.1|	-	0.13	12.2	0.2	0.39	10.6	0.0	1.7	2	0	0	2	2	2	0	HmuY	protein
TPR_11	PF13414.1	gi|479324439|ref|YP_007864487.1|	-	1.7e-34	117.2	22.7	9.5e-14	50.8	0.3	4.8	4	1	1	5	5	5	4	TPR	repeat
TPR_1	PF00515.23	gi|479324439|ref|YP_007864487.1|	-	6.4e-28	95.1	27.2	2.7e-05	23.5	1.6	8.0	8	0	0	8	8	8	6	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|479324439|ref|YP_007864487.1|	-	7.7e-27	91.0	25.4	1.7e-05	24.3	0.7	8.1	5	3	2	8	8	8	7	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|479324439|ref|YP_007864487.1|	-	2.5e-21	75.7	11.1	4.1e-06	27.3	0.3	4.7	1	1	4	5	5	5	5	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|479324439|ref|YP_007864487.1|	-	4e-17	60.9	10.7	0.00014	21.7	0.1	6.1	6	1	0	6	6	5	4	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|479324439|ref|YP_007864487.1|	-	8e-17	61.3	19.6	0.00038	20.7	0.3	6.1	2	2	4	6	6	6	5	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|479324439|ref|YP_007864487.1|	-	9.6e-17	60.6	16.8	9.3e-07	28.7	0.7	5.7	3	1	3	6	6	6	4	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|479324439|ref|YP_007864487.1|	-	5.2e-13	48.9	12.5	0.0002	21.4	0.7	4.5	1	1	5	6	6	6	6	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_8	PF13181.1	gi|479324439|ref|YP_007864487.1|	-	6.1e-13	47.5	26.3	0.0037	16.9	0.1	6.6	6	1	1	7	7	6	4	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|479324439|ref|YP_007864487.1|	-	1.3e-12	47.1	10.3	0.01	16.3	0.1	7.8	2	2	6	8	8	8	3	Tetratricopeptide	repeat
TPR_9	PF13371.1	gi|479324439|ref|YP_007864487.1|	-	2.5e-11	43.2	0.7	0.014	15.2	0.0	5.0	2	1	2	4	4	4	4	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|479324439|ref|YP_007864487.1|	-	2e-09	37.2	17.9	1.5	9.4	0.1	8.1	8	0	0	8	8	8	2	Tetratricopeptide	repeat
NARP1	PF12569.3	gi|479324439|ref|YP_007864487.1|	-	3.4e-08	32.6	1.1	0.0011	17.8	0.0	3.3	2	1	1	3	3	3	2	NMDA	receptor-regulated	protein	1
TPR_21	PF09976.4	gi|479324439|ref|YP_007864487.1|	-	4.1e-07	30.0	3.4	0.034	14.0	0.1	3.6	3	1	0	3	3	3	2	Tetratricopeptide	repeat
Fis1_TPR_C	PF14853.1	gi|479324439|ref|YP_007864487.1|	-	2.5e-06	27.2	10.2	0.018	14.9	0.3	4.7	5	1	1	6	6	5	2	Fis1	C-terminal	tetratricopeptide	repeat
TPR_7	PF13176.1	gi|479324439|ref|YP_007864487.1|	-	9.2e-05	21.9	8.4	10	6.1	0.1	5.9	5	1	1	6	6	5	0	Tetratricopeptide	repeat
Alkyl_sulf_dimr	PF14863.1	gi|479324439|ref|YP_007864487.1|	-	0.0001	22.5	0.2	0.0013	18.9	0.0	2.4	2	0	0	2	2	2	1	Alkyl	sulfatase	dimerisation
DUF3856	PF12968.2	gi|479324439|ref|YP_007864487.1|	-	0.00023	21.0	2.3	0.43	10.4	0.2	4.4	2	1	1	3	3	3	1	Domain	of	Unknown	Function	(DUF3856)
TPR_4	PF07721.9	gi|479324439|ref|YP_007864487.1|	-	0.0013	18.9	0.0	33	5.2	0.0	4.8	5	0	0	5	5	5	0	Tetratricopeptide	repeat
BTAD	PF03704.12	gi|479324439|ref|YP_007864487.1|	-	0.0023	18.2	0.0	1.7	8.9	0.0	2.8	1	1	0	3	3	3	1	Bacterial	transcriptional	activator	domain
TPR_10	PF13374.1	gi|479324439|ref|YP_007864487.1|	-	0.0031	17.3	7.3	0.2	11.6	0.0	5.3	6	0	0	6	6	5	1	Tetratricopeptide	repeat
DUF627	PF04781.7	gi|479324439|ref|YP_007864487.1|	-	0.0052	16.3	0.6	0.33	10.6	0.0	2.9	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF627)
Coatomer_E	PF04733.9	gi|479324439|ref|YP_007864487.1|	-	0.013	14.6	3.1	0.032	13.4	0.4	2.8	2	1	1	3	3	3	0	Coatomer	epsilon	subunit
TPR_5	PF12688.2	gi|479324439|ref|YP_007864487.1|	-	0.061	13.3	0.6	1.3	9.1	0.0	3.0	3	1	1	4	4	4	0	Tetratrico	peptide	repeat
RPN7	PF10602.4	gi|479324439|ref|YP_007864487.1|	-	0.063	12.6	1.6	1.7	7.9	0.4	3.4	1	1	1	2	2	2	0	26S	proteasome	subunit	RPN7
YfdX	PF10938.3	gi|479324439|ref|YP_007864487.1|	-	0.19	11.3	2.4	6.6	6.3	0.0	3.2	3	1	1	4	4	3	0	YfdX	protein
DUF4398	PF14346.1	gi|479324439|ref|YP_007864487.1|	-	1	9.4	5.1	7	6.7	0.1	3.5	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4398)
AIG2	PF06094.7	gi|479324440|ref|YP_007864488.1|	-	3.1e-21	75.7	3.9	2.6e-15	56.7	0.7	2.2	2	0	0	2	2	2	2	AIG2-like	family
AIG2_2	PF13772.1	gi|479324440|ref|YP_007864488.1|	-	3.1e-12	46.4	1.9	1.2e-07	31.7	0.1	2.4	2	1	0	2	2	2	2	AIG2-like	family
LSM	PF01423.17	gi|479324440|ref|YP_007864488.1|	-	0.029	13.9	0.2	0.18	11.3	0.0	2.1	2	0	0	2	2	2	0	LSM	domain
SF3b10	PF07189.6	gi|479324440|ref|YP_007864488.1|	-	0.095	12.5	0.0	1.2	8.9	0.0	2.2	2	0	0	2	2	2	0	Splicing	factor	3B	subunit	10	(SF3b10)
NfeD	PF01957.13	gi|479324442|ref|YP_007864490.1|	-	2.2e-15	57.0	2.9	3.3e-15	56.4	2.0	1.3	1	1	0	1	1	1	1	NfeD-like	C-terminal,	partner-binding
DUF1953	PF09196.5	gi|479324442|ref|YP_007864490.1|	-	0.15	11.8	0.8	0.52	10.0	0.4	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1953)
Thermopsin	PF05317.6	gi|479324443|ref|YP_007864491.1|	-	3.6e-54	183.4	9.8	3.6e-54	183.4	6.8	1.7	2	0	0	2	2	2	1	Thermopsin
Band_7	PF01145.20	gi|479324444|ref|YP_007864492.1|	-	9.2e-38	129.9	2.5	1.3e-37	129.4	1.7	1.2	1	0	0	1	1	1	1	SPFH	domain	/	Band	7	family
Band_7_1	PF13421.1	gi|479324444|ref|YP_007864492.1|	-	0.0016	18.0	0.2	0.0037	16.8	0.2	1.6	2	0	0	2	2	2	1	SPFH	domain-Band	7	family
NurA	PF09376.5	gi|479324445|ref|YP_007864493.1|	-	2.9e-23	82.6	6.1	3.5e-23	82.3	4.3	1.1	1	0	0	1	1	1	1	NurA	domain
DUF4201	PF13870.1	gi|479324446|ref|YP_007864494.1|	-	0.00092	18.6	13.1	0.00092	18.6	9.0	2.5	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4201)
TrmB	PF01978.14	gi|479324446|ref|YP_007864494.1|	-	0.0057	16.3	2.6	1.5	8.6	0.0	2.8	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_7	PF02796.10	gi|479324446|ref|YP_007864494.1|	-	0.016	15.0	0.6	2.5	8.0	0.1	2.9	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	resolvase
Reo_sigmaC	PF04582.7	gi|479324446|ref|YP_007864494.1|	-	0.031	13.4	2.0	0.14	11.3	1.0	1.8	1	1	1	2	2	2	0	Reovirus	sigma	C	capsid	protein
HTH_5	PF01022.15	gi|479324446|ref|YP_007864494.1|	-	0.072	12.7	0.5	0.072	12.7	0.4	2.7	4	0	0	4	4	3	0	Bacterial	regulatory	protein,	arsR	family
DUF885	PF05960.6	gi|479324446|ref|YP_007864494.1|	-	0.2	10.7	8.5	0.26	10.4	5.9	1.1	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF885)
Baculo_PEP_C	PF04513.7	gi|479324446|ref|YP_007864494.1|	-	0.24	11.1	13.9	3.7	7.3	0.9	3.2	1	1	1	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
MutS_III	PF05192.13	gi|479324446|ref|YP_007864494.1|	-	0.27	10.9	8.8	0.48	10.1	6.0	1.4	1	1	0	1	1	1	0	MutS	domain	III
Allexi_40kDa	PF05549.6	gi|479324446|ref|YP_007864494.1|	-	0.33	10.2	15.1	0.22	10.7	3.5	2.6	1	1	1	2	2	2	0	Allexivirus	40kDa	protein
DASH_Duo1	PF08651.5	gi|479324446|ref|YP_007864494.1|	-	0.45	10.1	10.3	4	7.0	2.5	3.6	1	1	2	3	3	3	0	DASH	complex	subunit	Duo1
Latarcin	PF10279.4	gi|479324446|ref|YP_007864494.1|	-	0.58	10.3	11.7	1.5e+02	2.6	8.1	3.5	1	1	0	1	1	1	0	Latarcin	precursor
NPV_P10	PF05531.7	gi|479324446|ref|YP_007864494.1|	-	0.66	10.2	14.4	7.6	6.8	3.4	3.6	1	1	2	3	3	3	0	Nucleopolyhedrovirus	P10	protein
CobN-Mg_chel	PF02514.11	gi|479324446|ref|YP_007864494.1|	-	0.76	7.0	11.1	0.88	6.8	7.7	1.0	1	0	0	1	1	1	0	CobN/Magnesium	Chelatase
DUF2664	PF10867.3	gi|479324446|ref|YP_007864494.1|	-	0.87	10.2	4.7	0.33	11.6	0.8	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2664)
DUF4250	PF14056.1	gi|479324446|ref|YP_007864494.1|	-	1.1	9.0	7.2	0.21	11.3	0.7	2.9	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4250)
BLOC1_2	PF10046.4	gi|479324446|ref|YP_007864494.1|	-	1.5	9.0	36.2	0.14	12.2	6.1	3.4	1	1	2	3	3	3	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
DUF4164	PF13747.1	gi|479324446|ref|YP_007864494.1|	-	2.1	8.5	17.1	2	8.6	2.2	4.0	3	1	1	4	4	4	0	Domain	of	unknown	function	(DUF4164)
CmcH_NodU	PF02543.10	gi|479324446|ref|YP_007864494.1|	-	2.3	7.2	4.7	1.7	7.6	1.2	1.9	1	1	1	2	2	2	0	Carbamoyltransferase
Apolipoprotein	PF01442.13	gi|479324446|ref|YP_007864494.1|	-	2.7	7.4	11.0	4.8	6.6	7.6	1.5	1	1	0	1	1	1	0	Apolipoprotein	A1/A4/E	domain
BRO1	PF03097.13	gi|479324446|ref|YP_007864494.1|	-	3.9	6.1	11.2	0.46	9.1	2.0	2.2	1	1	1	2	2	2	0	BRO1-like	domain
FliD_N	PF02465.13	gi|479324446|ref|YP_007864494.1|	-	4.5	7.7	8.5	15	5.9	2.8	3.2	1	1	1	2	2	2	0	Flagellar	hook-associated	protein	2	N-terminus
MerR-DNA-bind	PF09278.6	gi|479324446|ref|YP_007864494.1|	-	4.9	7.6	9.9	22	5.5	2.5	3.7	3	1	0	3	3	2	0	MerR,	DNA	binding
DUF745	PF05335.8	gi|479324446|ref|YP_007864494.1|	-	5.7	6.4	6.7	3.6	7.0	2.4	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF745)
IncA	PF04156.9	gi|479324446|ref|YP_007864494.1|	-	7.4	6.1	22.7	16	4.9	14.6	2.1	1	1	1	2	2	2	0	IncA	protein
Img2	PF05046.9	gi|479324446|ref|YP_007864494.1|	-	9.6	6.5	10.3	3.2	8.0	3.7	2.7	1	1	0	2	2	2	0	Mitochondrial	large	subunit	ribosomal	protein	(Img2)
KAP_NTPase	PF07693.9	gi|479324447|ref|YP_007864495.1|	-	4.9e-05	22.4	0.0	0.00014	20.9	0.0	1.8	1	0	0	1	1	1	1	KAP	family	P-loop	domain
AAA_16	PF13191.1	gi|479324447|ref|YP_007864495.1|	-	0.0047	16.9	0.0	0.034	14.1	0.0	2.4	3	0	0	3	3	3	1	AAA	ATPase	domain
Hemerythrin	PF01814.18	gi|479324447|ref|YP_007864495.1|	-	0.039	14.1	0.4	11	6.2	0.1	3.3	3	1	0	3	3	3	0	Hemerythrin	HHE	cation	binding	domain
DUF948	PF06103.6	gi|479324447|ref|YP_007864495.1|	-	0.43	10.4	11.0	1.3	8.8	0.3	4.3	4	0	0	4	4	4	0	Bacterial	protein	of	unknown	function	(DUF948)
MCPsignal	PF00015.16	gi|479324447|ref|YP_007864495.1|	-	1.2	8.6	8.5	4.3	6.8	0.2	3.2	4	0	0	4	4	4	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
Syntaxin_2	PF14523.1	gi|479324447|ref|YP_007864495.1|	-	2.5	8.1	20.8	0.54	10.3	1.0	5.5	6	0	0	6	6	6	0	Syntaxin-like	protein
DUF87	PF01935.12	gi|479324448|ref|YP_007864496.1|	-	8.1e-43	146.8	1.3	8.1e-43	146.8	0.9	1.4	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF87
AAA_10	PF12846.2	gi|479324448|ref|YP_007864496.1|	-	4.5e-13	49.3	0.3	2.7e-12	46.7	0.2	2.0	1	1	0	1	1	1	1	AAA-like	domain
FtsK_SpoIIIE	PF01580.13	gi|479324448|ref|YP_007864496.1|	-	9.9e-05	21.9	0.0	0.0019	17.6	0.0	2.2	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
AAA_22	PF13401.1	gi|479324448|ref|YP_007864496.1|	-	0.00054	20.0	0.3	0.22	11.6	0.0	3.2	3	0	0	3	3	3	1	AAA	domain
TrwB_AAD_bind	PF10412.4	gi|479324448|ref|YP_007864496.1|	-	0.0065	15.1	0.0	0.051	12.1	0.0	2.2	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
HAS-barrel	PF09378.5	gi|479324448|ref|YP_007864496.1|	-	0.0082	16.0	0.4	0.046	13.6	0.1	2.3	2	0	0	2	2	2	1	HAS	barrel	domain
DUF771	PF05595.6	gi|479324448|ref|YP_007864496.1|	-	0.02	14.7	0.1	0.11	12.3	0.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF771)
Zot	PF05707.7	gi|479324448|ref|YP_007864496.1|	-	0.025	14.0	0.1	0.15	11.4	0.0	2.2	3	0	0	3	3	3	0	Zonular	occludens	toxin	(Zot)
Thioredox_DsbH	PF03190.10	gi|479324452|ref|YP_007864500.1|	-	9.7e-62	207.4	0.0	1.7e-61	206.6	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF255
Thioredoxin_7	PF13899.1	gi|479324452|ref|YP_007864500.1|	-	7.2e-16	57.9	0.0	1.4e-15	57.0	0.0	1.5	1	0	0	1	1	1	1	Thioredoxin-like
Thioredoxin_2	PF13098.1	gi|479324452|ref|YP_007864500.1|	-	3.7e-05	23.8	0.0	9.4e-05	22.5	0.0	1.6	1	0	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin	PF00085.15	gi|479324452|ref|YP_007864500.1|	-	0.0036	16.9	0.1	0.0075	15.9	0.1	1.4	1	0	0	1	1	1	1	Thioredoxin
adh_short_C2	PF13561.1	gi|479324453|ref|YP_007864501.1|	-	1.6e-15	57.5	0.0	3.4e-15	56.4	0.0	1.5	1	1	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|479324453|ref|YP_007864501.1|	-	4.7e-13	49.3	0.0	5.7e-13	49.1	0.0	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
NAD_binding_10	PF13460.1	gi|479324453|ref|YP_007864501.1|	-	0.00012	22.1	0.0	0.00025	21.1	0.0	1.5	1	1	0	1	1	1	1	NADH(P)-binding
KR	PF08659.5	gi|479324453|ref|YP_007864501.1|	-	0.00025	20.7	0.2	0.00093	18.8	0.1	1.8	1	1	0	1	1	1	1	KR	domain
ADH_zinc_N	PF00107.21	gi|479324453|ref|YP_007864501.1|	-	0.024	14.2	0.3	5.8	6.4	0.0	2.7	2	2	0	2	2	2	0	Zinc-binding	dehydrogenase
TENA_THI-4	PF03070.11	gi|479324454|ref|YP_007864502.1|	-	1.5e-31	109.8	0.4	1.8e-31	109.5	0.2	1.1	1	0	0	1	1	1	1	TENA/THI-4/PQQC	family
PA14	PF07691.7	gi|479324455|ref|YP_007864503.1|	-	0.05	13.2	0.0	0.084	12.5	0.0	1.3	1	0	0	1	1	1	0	PA14	domain
RNA_bind	PF08675.6	gi|479324455|ref|YP_007864503.1|	-	0.081	12.9	0.0	0.19	11.7	0.0	1.6	1	0	0	1	1	1	0	RNA	binding	domain
Wzt_C	PF14524.1	gi|479324455|ref|YP_007864503.1|	-	0.37	10.4	3.6	11	5.6	0.2	2.6	1	1	2	3	3	3	0	Wzt	C-terminal	domain
DUF91	PF01939.11	gi|479324456|ref|YP_007864504.1|	-	3.4e-65	219.4	0.2	4e-65	219.1	0.2	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF91
Cas_Cas4	PF01930.12	gi|479324456|ref|YP_007864504.1|	-	0.00033	20.5	0.1	0.0007	19.5	0.0	1.5	1	1	0	1	1	1	1	Domain	of	unknown	function	DUF83
UPF0102	PF02021.12	gi|479324456|ref|YP_007864504.1|	-	0.00034	20.4	0.0	0.0027	17.6	0.0	2.5	2	0	0	2	2	2	1	Uncharacterised	protein	family	UPF0102
PDDEXK_4	PF14281.1	gi|479324456|ref|YP_007864504.1|	-	0.00058	19.7	0.4	0.00089	19.1	0.3	1.5	1	0	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
PDDEXK_1	PF12705.2	gi|479324456|ref|YP_007864504.1|	-	0.0096	15.3	0.1	0.01	15.2	0.0	1.2	1	0	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
DUF1626	PF07788.6	gi|479324456|ref|YP_007864504.1|	-	0.014	15.1	0.1	0.057	13.1	0.1	2.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1626)
DUF234	PF03008.9	gi|479324456|ref|YP_007864504.1|	-	0.035	14.2	0.3	0.82	9.8	0.0	2.9	1	1	1	3	3	3	0	Archaea	bacterial	proteins	of	unknown	function
DUF1703	PF08011.6	gi|479324456|ref|YP_007864504.1|	-	0.068	12.8	0.0	0.18	11.5	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1703)
DUF1052	PF06319.7	gi|479324456|ref|YP_007864504.1|	-	0.091	12.0	0.0	0.15	11.2	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1052)
Glycos_transf_2	PF00535.21	gi|479324457|ref|YP_007864505.1|	-	1.6e-16	60.4	0.0	2.8e-16	59.6	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.1	gi|479324457|ref|YP_007864505.1|	-	2e-15	56.5	0.0	2.9e-15	55.9	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_tranf_2_3	PF13641.1	gi|479324457|ref|YP_007864505.1|	-	3.3e-14	53.2	0.0	4.7e-14	52.7	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Radical_SAM	PF04055.16	gi|479324459|ref|YP_007864507.1|	-	2.6e-11	43.9	0.3	2e-10	41.1	0.0	2.1	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|479324459|ref|YP_007864507.1|	-	1.1e-10	41.7	0.0	2.3e-10	40.7	0.0	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|479324459|ref|YP_007864507.1|	-	1.2e-06	28.4	0.0	2.6e-06	27.4	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
SPASM	PF13186.1	gi|479324459|ref|YP_007864507.1|	-	0.032	14.5	0.1	0.16	12.2	0.1	2.1	1	1	0	1	1	1	0	Iron-sulfur	cluster-binding	domain
OPT	PF03169.10	gi|479324460|ref|YP_007864508.1|	-	0.0033	15.9	0.5	0.0043	15.5	0.4	1.2	1	0	0	1	1	1	1	OPT	oligopeptide	transporter	protein
PLDc_2	PF13091.1	gi|479324460|ref|YP_007864508.1|	-	0.012	15.3	0.7	0.028	14.1	0.4	1.7	1	1	0	1	1	1	0	PLD-like	domain
DUF2201	PF09967.4	gi|479324460|ref|YP_007864508.1|	-	0.43	10.6	2.3	0.4	10.7	0.3	1.9	2	0	0	2	2	2	0	VWA-like	domain	(DUF2201)
Cation_efflux	PF01545.16	gi|479324460|ref|YP_007864508.1|	-	0.52	9.3	7.8	0.71	8.8	4.7	1.7	1	1	0	1	1	1	0	Cation	efflux	family
DBI_PRT	PF02277.12	gi|479324461|ref|YP_007864509.1|	-	6.6e-44	150.3	0.1	8.6e-44	149.9	0.1	1.1	1	0	0	1	1	1	1	Phosphoribosyltransferase
F-box	PF00646.28	gi|479324461|ref|YP_007864509.1|	-	0.12	12.0	0.0	0.2	11.3	0.0	1.4	1	0	0	1	1	1	0	F-box	domain
DUF3514	PF12027.3	gi|479324462|ref|YP_007864510.1|	-	0.056	12.6	0.5	0.074	12.2	0.3	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3514)
AF0941-like	PF14591.1	gi|479324462|ref|YP_007864510.1|	-	0.1	12.6	3.6	0.23	11.5	2.5	1.5	1	1	0	1	1	1	0	AF0941-like
Aminotran_5	PF00266.14	gi|479324463|ref|YP_007864511.1|	-	4.3e-50	170.4	0.0	6.3e-50	169.9	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class-V
DegT_DnrJ_EryC1	PF01041.12	gi|479324463|ref|YP_007864511.1|	-	2.8e-05	23.3	0.2	0.00047	19.3	0.0	2.0	2	0	0	2	2	2	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Cys_Met_Meta_PP	PF01053.15	gi|479324463|ref|YP_007864511.1|	-	0.00027	19.3	0.1	0.00041	18.7	0.1	1.2	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
TA0956	PF11513.3	gi|479324463|ref|YP_007864511.1|	-	0.15	12.1	3.5	5.7	7.0	0.1	2.9	2	1	1	3	3	3	0	Thermoplasma	acidophilum	protein	TA0956
AMP-binding	PF00501.23	gi|479324464|ref|YP_007864512.1|	-	5.1e-71	239.2	0.0	6.6e-71	238.8	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|479324464|ref|YP_007864512.1|	-	1.1e-14	55.1	0.1	2e-14	54.2	0.1	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
DUF4411	PF14367.1	gi|479324465|ref|YP_007864513.1|	-	0.0037	16.9	0.1	0.0049	16.5	0.1	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4411)
DZR	PF12773.2	gi|479324465|ref|YP_007864513.1|	-	0.039	13.7	0.5	0.061	13.1	0.3	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
DUF1272	PF06906.6	gi|479324465|ref|YP_007864513.1|	-	0.061	13.1	0.2	0.094	12.5	0.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1272)
FANCL_C	PF11793.3	gi|479324465|ref|YP_007864513.1|	-	0.063	13.2	0.7	0.11	12.4	0.5	1.4	1	0	0	1	1	1	0	FANCL	C-terminal	domain
zf-LYAR	PF08790.6	gi|479324465|ref|YP_007864513.1|	-	0.079	12.6	0.6	0.15	11.7	0.4	1.4	1	0	0	1	1	1	0	LYAR-type	C2HC	zinc	finger
Zn-ribbon_8	PF09723.5	gi|479324465|ref|YP_007864513.1|	-	0.098	12.6	4.0	2.4	8.1	2.8	2.4	1	1	0	1	1	1	0	Zinc	ribbon	domain
PIN	PF01850.16	gi|479324465|ref|YP_007864513.1|	-	0.11	12.8	0.2	0.32	11.3	0.2	1.8	1	1	0	1	1	1	0	PIN	domain
zf-ribbon_3	PF13248.1	gi|479324465|ref|YP_007864513.1|	-	0.12	11.5	1.3	0.24	10.6	0.9	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
HypA	PF01155.14	gi|479324465|ref|YP_007864513.1|	-	0.13	11.9	0.9	0.18	11.4	0.6	1.6	1	1	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
A2L_zn_ribbon	PF08792.5	gi|479324465|ref|YP_007864513.1|	-	0.14	11.6	3.2	3.7	7.1	0.1	2.4	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
zf-H2C2_2	PF13465.1	gi|479324465|ref|YP_007864513.1|	-	1.9	8.9	4.7	11	6.5	0.4	2.4	2	0	0	2	2	2	0	Zinc-finger	double	domain
NAD_kinase	PF01513.16	gi|479324466|ref|YP_007864514.1|	-	1e-27	96.6	0.1	1.2e-27	96.4	0.1	1.1	1	0	0	1	1	1	1	ATP-NAD	kinase
DAGK_cat	PF00781.19	gi|479324466|ref|YP_007864514.1|	-	0.028	13.8	0.0	0.053	12.9	0.0	1.4	1	0	0	1	1	1	0	Diacylglycerol	kinase	catalytic	domain
MFS_1	PF07690.11	gi|479324467|ref|YP_007864515.1|	-	6.2e-23	81.0	41.5	6.2e-23	81.0	28.8	1.8	1	1	0	1	1	1	1	Major	Facilitator	Superfamily
Herpes_UL74	PF07982.7	gi|479324468|ref|YP_007864516.1|	-	0.11	11.1	0.0	0.12	11.0	0.0	1.1	1	0	0	1	1	1	0	Herpes	UL74	glycoproteins
Pyr_redox_3	PF13738.1	gi|479324469|ref|YP_007864517.1|	-	3.8e-18	66.2	0.3	6.5e-15	55.7	0.2	2.3	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.9	gi|479324469|ref|YP_007864517.1|	-	5.5e-18	65.5	1.2	7.8e-18	65.0	0.8	1.3	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|479324469|ref|YP_007864517.1|	-	5e-12	46.0	0.4	2.5e-09	37.3	0.0	2.9	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
K_oxygenase	PF13434.1	gi|479324469|ref|YP_007864517.1|	-	2.2e-10	40.0	0.1	1.1e-08	34.4	0.0	2.5	2	1	1	3	3	3	2	L-lysine	6-monooxygenase	(NADPH-requiring)
DAO	PF01266.19	gi|479324469|ref|YP_007864517.1|	-	4.9e-07	28.9	0.4	0.014	14.3	0.0	3.0	3	0	0	3	3	3	2	FAD	dependent	oxidoreductase
HI0933_like	PF03486.9	gi|479324469|ref|YP_007864517.1|	-	6.5e-07	28.1	2.2	0.0018	16.8	0.1	3.4	4	1	1	5	5	5	2	HI0933-like	protein
NAD_binding_8	PF13450.1	gi|479324469|ref|YP_007864517.1|	-	8.1e-05	22.5	0.3	0.0018	18.2	0.1	2.4	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
FMO-like	PF00743.14	gi|479324469|ref|YP_007864517.1|	-	0.0001	20.6	0.4	0.001	17.3	0.0	2.0	1	1	0	2	2	2	1	Flavin-binding	monooxygenase-like
NAD_binding_7	PF13241.1	gi|479324469|ref|YP_007864517.1|	-	0.00011	22.3	0.5	0.0018	18.4	0.1	2.4	2	0	0	2	2	2	1	Putative	NAD(P)-binding
FAD_oxidored	PF12831.2	gi|479324469|ref|YP_007864517.1|	-	0.029	13.4	0.4	0.084	11.9	0.0	1.9	3	0	0	3	3	3	0	FAD	dependent	oxidoreductase
Met_10	PF02475.11	gi|479324470|ref|YP_007864518.1|	-	4.2e-31	108.1	1.0	5e-31	107.8	0.7	1.1	1	0	0	1	1	1	1	Met-10+	like-protein
MTS	PF05175.9	gi|479324470|ref|YP_007864518.1|	-	0.0049	16.2	0.0	0.0079	15.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_26	PF13659.1	gi|479324470|ref|YP_007864518.1|	-	0.025	14.6	0.0	0.035	14.1	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|479324470|ref|YP_007864518.1|	-	0.087	12.4	0.1	0.19	11.3	0.1	1.6	1	1	0	1	1	1	0	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|479324470|ref|YP_007864518.1|	-	0.13	12.7	0.0	0.24	11.9	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
DUF371	PF04027.8	gi|479324471|ref|YP_007864519.1|	-	8.8e-49	164.5	0.9	1e-48	164.3	0.6	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF371)
CRS1_YhbY	PF01985.16	gi|479324472|ref|YP_007864520.1|	-	1.4e-19	69.8	2.2	1.7e-19	69.5	1.5	1.1	1	0	0	1	1	1	1	CRS1	/	YhbY	(CRM)	domain
YceG	PF02618.11	gi|479324472|ref|YP_007864520.1|	-	0.022	13.7	0.1	0.022	13.7	0.1	1.0	1	0	0	1	1	1	0	YceG-like	family
DUF3216	PF11505.3	gi|479324472|ref|YP_007864520.1|	-	0.045	13.5	1.1	0.059	13.1	0.8	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3216)
DUF1638	PF07796.6	gi|479324472|ref|YP_007864520.1|	-	0.079	12.5	0.1	0.087	12.4	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1638)
EMG1	PF03587.9	gi|479324473|ref|YP_007864521.1|	-	6.7e-50	169.1	0.3	7.5e-50	169.0	0.2	1.0	1	0	0	1	1	1	1	EMG1/NEP1	methyltransferase
RDV-p3	PF09231.5	gi|479324474|ref|YP_007864522.1|	-	0.0061	14.0	0.0	0.0069	13.8	0.0	1.1	1	0	0	1	1	1	1	Rice	dwarf	virus	p3
FBP	PF07299.6	gi|479324474|ref|YP_007864522.1|	-	0.03	13.6	0.1	0.045	13.0	0.1	1.2	1	0	0	1	1	1	0	Fibronectin-binding	protein	(FBP)
RHH_1	PF01402.16	gi|479324474|ref|YP_007864522.1|	-	0.11	12.3	0.2	0.55	10.2	0.2	2.1	2	0	0	2	2	2	0	Ribbon-helix-helix	protein,	copG	family
CLPTM1	PF05602.7	gi|479324475|ref|YP_007864523.1|	-	0.028	13.1	0.1	0.028	13.1	0.1	1.1	1	0	0	1	1	1	0	Cleft	lip	and	palate	transmembrane	protein	1	(CLPTM1)
YfzA	PF14118.1	gi|479324475|ref|YP_007864523.1|	-	0.056	13.5	2.4	0.075	13.1	1.7	1.4	1	1	0	1	1	1	0	YfzA-like	protein
FixQ	PF05545.6	gi|479324475|ref|YP_007864523.1|	-	1.1	8.9	5.4	5	6.8	0.2	2.2	2	0	0	2	2	2	0	Cbb3-type	cytochrome	oxidase	component	FixQ
Cation_efflux	PF01545.16	gi|479324476|ref|YP_007864524.1|	-	2.9e-16	59.4	3.2	3.4e-16	59.1	2.2	1.0	1	0	0	1	1	1	1	Cation	efflux	family
VitK2_biosynth	PF02621.9	gi|479324477|ref|YP_007864525.1|	-	2.7e-51	174.2	0.0	3e-51	174.0	0.0	1.0	1	0	0	1	1	1	1	Menaquinone	biosynthesis
NTPase_I-T	PF01931.13	gi|479324478|ref|YP_007864526.1|	-	4.2e-39	133.9	0.0	4.7e-39	133.7	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF84
Corona_NS2	PF04753.7	gi|479324478|ref|YP_007864526.1|	-	0.1	12.5	0.0	0.18	11.7	0.0	1.4	1	0	0	1	1	1	0	Coronavirus	non-structural	protein	NS2
Phosphodiest	PF01663.17	gi|479324479|ref|YP_007864527.1|	-	0.055	12.7	0.0	0.092	12.0	0.0	1.4	1	1	0	1	1	1	0	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
Thioredoxin	PF00085.15	gi|479324480|ref|YP_007864528.1|	-	7.6e-28	96.2	0.0	1.1e-27	95.7	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.1	gi|479324480|ref|YP_007864528.1|	-	1.4e-07	31.6	0.6	7.5e-06	26.1	0.1	2.5	1	1	1	2	2	2	1	Thioredoxin-like	domain
Thioredoxin_8	PF13905.1	gi|479324480|ref|YP_007864528.1|	-	3.9e-06	26.8	0.4	0.0018	18.3	0.0	2.6	2	1	1	3	3	3	2	Thioredoxin-like
Thioredoxin_3	PF13192.1	gi|479324480|ref|YP_007864528.1|	-	4.7e-05	23.1	0.0	7.9e-05	22.3	0.0	1.5	1	1	0	1	1	1	1	Thioredoxin	domain
Thioredoxin_9	PF14595.1	gi|479324480|ref|YP_007864528.1|	-	0.00054	19.5	0.2	0.00064	19.2	0.2	1.2	1	0	0	1	1	1	1	Thioredoxin
HyaE	PF07449.6	gi|479324480|ref|YP_007864528.1|	-	0.00092	19.0	0.0	0.0021	17.9	0.0	1.7	1	1	0	1	1	1	1	Hydrogenase-1	expression	protein	HyaE
Thioredoxin_6	PF13848.1	gi|479324480|ref|YP_007864528.1|	-	0.0038	17.0	0.2	0.0061	16.3	0.2	1.3	1	1	0	1	1	1	1	Thioredoxin-like	domain
Redoxin	PF08534.5	gi|479324480|ref|YP_007864528.1|	-	0.0041	16.6	0.0	0.0051	16.3	0.0	1.2	1	0	0	1	1	1	1	Redoxin
Phosducin	PF02114.11	gi|479324480|ref|YP_007864528.1|	-	0.008	14.9	0.0	0.0091	14.7	0.0	1.1	1	0	0	1	1	1	1	Phosducin
DAO	PF01266.19	gi|479324481|ref|YP_007864529.1|	-	5.9e-22	78.0	0.0	1.1e-21	77.1	0.0	1.5	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
tRNA_deacylase	PF04414.7	gi|479324482|ref|YP_007864530.1|	-	7.2e-67	224.6	0.0	8.3e-67	224.4	0.0	1.0	1	0	0	1	1	1	1	D-aminoacyl-tRNA	deacylase
His_Phos_1	PF00300.17	gi|479324483|ref|YP_007864531.1|	-	5.8e-31	107.7	0.0	7.1e-31	107.4	0.0	1.1	1	0	0	1	1	1	1	Histidine	phosphatase	superfamily	(branch	1)
Metallophos_2	PF12850.2	gi|479324484|ref|YP_007864532.1|	-	3.9e-07	30.0	0.0	1.8e-06	27.9	0.0	1.9	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|479324484|ref|YP_007864532.1|	-	7e-07	28.8	1.8	5.1e-06	26.0	1.2	2.3	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_3	PF14582.1	gi|479324484|ref|YP_007864532.1|	-	0.00012	21.2	0.6	0.00055	19.1	0.0	2.3	3	0	0	3	3	3	1	Metallophosphoesterase,	calcineurin	superfamily
AAA_13	PF13166.1	gi|479324486|ref|YP_007864534.1|	-	1.1e-06	27.4	55.6	0.00036	19.1	4.9	3.2	1	1	1	3	3	3	3	AAA	domain
AAA_27	PF13514.1	gi|479324486|ref|YP_007864534.1|	-	9.7e-05	20.2	0.5	9.7e-05	20.2	0.4	3.4	1	1	1	3	3	3	1	AAA	domain
Myco_haema	PF05692.7	gi|479324486|ref|YP_007864534.1|	-	0.021	13.5	4.6	0.049	12.3	3.2	1.5	1	0	0	1	1	1	0	Mycoplasma	haemagglutinin
PA-IIL	PF07472.6	gi|479324486|ref|YP_007864534.1|	-	0.028	14.6	0.0	0.071	13.3	0.0	1.6	1	0	0	1	1	1	0	Fucose-binding	lectin	II	(PA-IIL)
SbcCD_C	PF13558.1	gi|479324486|ref|YP_007864534.1|	-	0.073	12.9	0.0	0.23	11.3	0.0	1.9	1	0	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_23	PF13476.1	gi|479324486|ref|YP_007864534.1|	-	0.089	13.1	79.8	1.9e+03	-1.0	0.1	4.5	1	1	1	2	2	1	0	AAA	domain
NPV_P10	PF05531.7	gi|479324486|ref|YP_007864534.1|	-	0.32	11.2	27.6	0.5	10.6	0.8	5.5	3	2	2	5	5	5	0	Nucleopolyhedrovirus	P10	protein
Prefoldin_2	PF01920.15	gi|479324486|ref|YP_007864534.1|	-	0.71	9.6	57.3	0.039	13.7	7.9	6.2	4	2	2	6	6	6	0	Prefoldin	subunit
SMC_N	PF02463.14	gi|479324486|ref|YP_007864534.1|	-	1.5	8.0	28.0	26	3.9	18.3	3.0	2	1	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
Mnd1	PF03962.10	gi|479324486|ref|YP_007864534.1|	-	2.7	7.6	48.0	0.55	9.8	5.3	4.4	2	2	2	4	4	4	0	Mnd1	family
DUF2968	PF11180.3	gi|479324486|ref|YP_007864534.1|	-	3.1	7.1	23.1	0.45	9.8	1.7	4.0	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF2968)
Filament	PF00038.16	gi|479324486|ref|YP_007864534.1|	-	3.3	7.0	51.9	0.34	10.3	25.0	2.4	1	1	1	2	2	2	0	Intermediate	filament	protein
Reo_sigmaC	PF04582.7	gi|479324486|ref|YP_007864534.1|	-	3.7	6.6	10.2	0.8	8.8	1.3	3.1	1	1	3	4	4	4	0	Reovirus	sigma	C	capsid	protein
IU_nuc_hydro	PF01156.14	gi|479324487|ref|YP_007864535.1|	-	5.9e-77	258.9	0.0	6.5e-77	258.8	0.0	1.0	1	0	0	1	1	1	1	Inosine-uridine	preferring	nucleoside	hydrolase
FUR	PF01475.14	gi|479324488|ref|YP_007864536.1|	-	2.3e-23	82.4	0.0	2.6e-23	82.2	0.0	1.0	1	0	0	1	1	1	1	Ferric	uptake	regulator	family
HTH_20	PF12840.2	gi|479324488|ref|YP_007864536.1|	-	8.6e-05	22.2	0.0	0.00017	21.3	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|479324488|ref|YP_007864536.1|	-	0.00041	19.9	0.1	0.01	15.4	0.0	2.6	1	1	1	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.1	gi|479324488|ref|YP_007864536.1|	-	0.003	16.9	0.7	0.0052	16.1	0.1	1.7	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|479324488|ref|YP_007864536.1|	-	0.0031	17.1	0.2	0.012	15.2	0.1	2.1	1	1	1	2	2	2	1	HTH	domain
PadR	PF03551.9	gi|479324488|ref|YP_007864536.1|	-	0.005	16.5	0.2	0.0081	15.9	0.1	1.3	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
Penicillinase_R	PF03965.11	gi|479324488|ref|YP_007864536.1|	-	0.013	15.5	0.0	0.023	14.8	0.0	1.4	1	0	0	1	1	1	0	Penicillinase	repressor
HTH_32	PF13565.1	gi|479324488|ref|YP_007864536.1|	-	0.013	16.2	0.0	0.023	15.4	0.0	1.4	1	0	0	1	1	1	0	Homeodomain-like	domain
HxlR	PF01638.12	gi|479324488|ref|YP_007864536.1|	-	0.051	13.2	0.0	0.091	12.3	0.0	1.5	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
HTH_28	PF13518.1	gi|479324488|ref|YP_007864536.1|	-	0.065	13.2	0.1	0.51	10.3	0.0	2.2	1	1	0	1	1	1	0	Helix-turn-helix	domain
RepL	PF05732.6	gi|479324488|ref|YP_007864536.1|	-	0.065	12.4	0.0	0.074	12.2	0.0	1.3	1	0	0	1	1	1	0	Firmicute	plasmid	replication	protein	(RepL)
HTH_Tnp_Tc3_2	PF01498.13	gi|479324488|ref|YP_007864536.1|	-	0.12	12.4	0.0	0.25	11.4	0.0	1.5	2	0	0	2	2	1	0	Transposase
Methyltransf_11	PF08241.7	gi|479324490|ref|YP_007864538.1|	-	1.9e-13	50.6	0.0	3e-13	50.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|479324490|ref|YP_007864538.1|	-	5.1e-05	23.0	0.0	7.2e-05	22.5	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|479324490|ref|YP_007864538.1|	-	0.00014	21.4	0.2	0.00028	20.5	0.1	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|479324490|ref|YP_007864538.1|	-	0.00056	19.1	0.0	0.00098	18.3	0.0	1.5	1	1	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_25	PF13649.1	gi|479324490|ref|YP_007864538.1|	-	0.0022	18.3	0.0	0.0057	16.9	0.0	1.7	1	0	0	1	1	1	1	Methyltransferase	domain
Stomoxyn	PF11585.3	gi|479324490|ref|YP_007864538.1|	-	0.093	12.5	0.1	0.19	11.5	0.1	1.4	1	0	0	1	1	1	0	Insect	antimicrobial	peptide,	stomoxyn
Methyltransf_12	PF08242.7	gi|479324490|ref|YP_007864538.1|	-	0.099	13.1	0.0	0.18	12.2	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
Cation_efflux	PF01545.16	gi|479324491|ref|YP_007864539.1|	-	1.2e-35	122.9	15.3	1.4e-35	122.7	10.6	1.0	1	0	0	1	1	1	1	Cation	efflux	family
DUF1097	PF06496.6	gi|479324491|ref|YP_007864539.1|	-	0.01	15.6	0.8	0.019	14.8	0.3	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1097)
NurA	PF09376.5	gi|479324492|ref|YP_007864540.1|	-	4e-33	114.9	1.7	5.2e-33	114.5	1.2	1.1	1	0	0	1	1	1	1	NurA	domain
AAA_23	PF13476.1	gi|479324493|ref|YP_007864541.1|	-	6.8e-19	68.9	24.4	6.8e-19	68.9	16.9	6.6	1	1	3	4	4	1	1	AAA	domain
Rad50_zn_hook	PF04423.9	gi|479324493|ref|YP_007864541.1|	-	1.5e-15	56.3	1.2	1.5e-15	56.3	0.8	8.2	8	2	1	9	9	8	1	Rad50	zinc	hook	motif
SMC_N	PF02463.14	gi|479324493|ref|YP_007864541.1|	-	7.7e-15	54.7	47.3	1.6e-13	50.3	32.8	2.6	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_27	PF13514.1	gi|479324493|ref|YP_007864541.1|	-	1.3e-13	49.6	81.4	7.1e-06	24.0	0.0	5.1	3	1	2	5	5	5	3	AAA	domain
AAA_21	PF13304.1	gi|479324493|ref|YP_007864541.1|	-	2.9e-12	47.1	28.3	1.3e-08	35.1	6.4	4.3	2	2	2	4	4	4	2	AAA	domain
AAA_13	PF13166.1	gi|479324493|ref|YP_007864541.1|	-	3.6e-12	45.6	109.9	6.4e-05	21.6	25.4	5.8	1	1	4	5	5	5	5	AAA	domain
SbcCD_C	PF13558.1	gi|479324493|ref|YP_007864541.1|	-	3.8e-06	26.7	0.0	9.7e-06	25.4	0.0	1.7	1	0	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
GAS	PF13851.1	gi|479324493|ref|YP_007864541.1|	-	5.2e-06	25.8	137.2	0.00046	19.4	23.2	6.0	2	2	3	5	5	5	4	Growth-arrest	specific	micro-tubule	binding
AAA_15	PF13175.1	gi|479324493|ref|YP_007864541.1|	-	9e-06	24.9	5.3	9e-06	24.9	3.7	3.6	1	1	1	3	3	2	1	AAA	ATPase	domain
AAA_29	PF13555.1	gi|479324493|ref|YP_007864541.1|	-	1.4e-05	24.5	0.0	2.5e-05	23.7	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
Reo_sigmaC	PF04582.7	gi|479324493|ref|YP_007864541.1|	-	0.00044	19.5	16.1	0.11	11.6	0.4	4.8	1	1	5	6	6	6	3	Reovirus	sigma	C	capsid	protein
Cep57_CLD_2	PF14197.1	gi|479324493|ref|YP_007864541.1|	-	0.0049	16.7	11.3	0.0049	16.7	7.8	8.3	5	3	2	7	7	4	1	Centrosome	localisation	domain	of	PPC89
DUF4164	PF13747.1	gi|479324493|ref|YP_007864541.1|	-	0.011	15.8	7.1	0.011	15.8	5.0	9.4	4	2	4	9	9	7	0	Domain	of	unknown	function	(DUF4164)
DUF258	PF03193.11	gi|479324493|ref|YP_007864541.1|	-	0.012	14.8	0.1	0.058	12.5	0.1	2.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
ABC_tran	PF00005.22	gi|479324493|ref|YP_007864541.1|	-	0.021	15.1	0.9	0.021	15.1	0.6	6.3	1	1	1	2	2	1	0	ABC	transporter
AAA_25	PF13481.1	gi|479324493|ref|YP_007864541.1|	-	0.045	13.1	1.5	0.54	9.6	0.0	3.2	3	0	0	3	3	3	0	AAA	domain
Myosin_tail_1	PF01576.14	gi|479324493|ref|YP_007864541.1|	-	0.082	10.6	119.8	0.045	11.4	12.0	3.2	1	1	1	3	3	3	0	Myosin	tail
PilJ	PF13675.1	gi|479324493|ref|YP_007864541.1|	-	0.46	10.8	24.0	1.7	9.0	0.4	6.3	3	2	2	5	5	5	0	Type	IV	pili	methyl-accepting	chemotaxis	transducer	N-term
Metallophos	PF00149.23	gi|479324494|ref|YP_007864542.1|	-	1.4e-12	47.4	0.1	2.5e-12	46.5	0.1	1.4	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|479324494|ref|YP_007864542.1|	-	1.3e-11	44.5	0.0	2e-11	43.9	0.0	1.3	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos_3	PF14582.1	gi|479324494|ref|YP_007864542.1|	-	0.033	13.3	0.3	0.44	9.6	0.0	2.2	1	1	1	2	2	2	0	Metallophosphoesterase,	calcineurin	superfamily
Ribosomal_S17e	PF00833.13	gi|479324494|ref|YP_007864542.1|	-	0.068	12.9	1.3	0.22	11.2	0.1	2.1	2	0	0	2	2	2	0	Ribosomal	S17
DUF87	PF01935.12	gi|479324495|ref|YP_007864543.1|	-	1.3e-43	149.5	2.4	2.2e-43	148.7	1.7	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF87
AAA_10	PF12846.2	gi|479324495|ref|YP_007864543.1|	-	6.1e-21	75.1	2.4	1.7e-19	70.4	1.7	2.1	1	1	0	1	1	1	1	AAA-like	domain
HAS-barrel	PF09378.5	gi|479324495|ref|YP_007864543.1|	-	2.8e-12	46.3	0.0	1.2e-11	44.3	0.0	2.2	1	0	0	1	1	1	1	HAS	barrel	domain
DUF853	PF05872.7	gi|479324495|ref|YP_007864543.1|	-	8.3e-12	44.2	0.0	2.9e-05	22.6	0.0	2.2	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
TrwB_AAD_bind	PF10412.4	gi|479324495|ref|YP_007864543.1|	-	1.3e-06	27.2	0.0	5.8e-06	25.1	0.0	1.8	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
FtsK_SpoIIIE	PF01580.13	gi|479324495|ref|YP_007864543.1|	-	0.00011	21.7	0.2	0.0013	18.2	0.1	2.2	1	1	0	1	1	1	1	FtsK/SpoIIIE	family
KdpD	PF02702.12	gi|479324495|ref|YP_007864543.1|	-	0.0088	15.1	0.2	0.02	14.0	0.1	1.5	1	0	0	1	1	1	1	Osmosensitive	K+	channel	His	kinase	sensor	domain
ABC_tran	PF00005.22	gi|479324495|ref|YP_007864543.1|	-	0.03	14.6	0.0	0.056	13.7	0.0	1.5	1	0	0	1	1	1	0	ABC	transporter
DUF892	PF05974.7	gi|479324496|ref|YP_007864544.1|	-	0.00056	19.7	15.9	0.12	12.2	0.8	2.3	1	1	1	2	2	2	2	Domain	of	unknown	function	(DUF892)
GCOM2	PF15328.1	gi|479324496|ref|YP_007864544.1|	-	0.00066	19.4	1.6	0.0055	16.4	0.9	2.2	1	1	0	1	1	1	1	Putative	GRINL1B	complex	locus	protein	2
TPR_15	PF13429.1	gi|479324496|ref|YP_007864544.1|	-	0.0012	17.9	0.8	0.0096	15.0	0.0	2.1	2	0	0	2	2	2	1	Tetratricopeptide	repeat
Fz	PF01392.17	gi|479324496|ref|YP_007864544.1|	-	0.002	18.4	2.0	0.88	9.9	0.2	2.2	1	1	1	2	2	2	2	Fz	domain
DUF2024	PF09630.5	gi|479324496|ref|YP_007864544.1|	-	0.0038	16.8	8.4	0.21	11.3	0.6	2.3	1	1	1	2	2	2	2	Domain	of	unknown	function	(DUF2024)
DUF4300	PF14133.1	gi|479324496|ref|YP_007864544.1|	-	0.098	11.9	7.7	1.4	8.0	1.0	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4300)
DUF2400	PF09674.5	gi|479324496|ref|YP_007864544.1|	-	0.19	11.3	6.5	0.48	10.0	1.6	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2400)
Blo-t-5	PF11642.3	gi|479324496|ref|YP_007864544.1|	-	0.48	10.1	14.4	2	8.1	0.6	3.1	2	1	1	3	3	3	0	Mite	allergen	Blo	t	5
DUF3349	PF11829.3	gi|479324496|ref|YP_007864544.1|	-	0.59	10.5	3.4	8.1	6.9	0.3	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3349)
DUF445	PF04286.7	gi|479324496|ref|YP_007864544.1|	-	0.59	9.5	9.2	0.81	9.1	6.4	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF445)
Oxidored_FMN	PF00724.15	gi|479324496|ref|YP_007864544.1|	-	1.2	8.1	8.5	4.7	6.1	0.4	2.1	1	1	1	2	2	2	0	NADH:flavin	oxidoreductase	/	NADH	oxidase	family
DUF2765	PF10963.3	gi|479324496|ref|YP_007864544.1|	-	1.4	8.9	5.2	0.55	10.2	0.6	2.3	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2765)
Ycf15	PF10705.4	gi|479324496|ref|YP_007864544.1|	-	1.6	8.8	3.8	26	4.9	0.3	2.4	1	1	1	2	2	2	0	Chloroplast	protein	precursor	Ycf15	putative
CENP-K	PF11802.3	gi|479324496|ref|YP_007864544.1|	-	3.1	6.9	12.6	3.9	6.6	8.7	1.1	1	0	0	1	1	1	0	Centromere-associated	protein	K
DUF2387	PF09526.5	gi|479324496|ref|YP_007864544.1|	-	3.1	7.7	5.5	5.5	6.9	0.8	2.4	1	1	1	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
DUF4407	PF14362.1	gi|479324496|ref|YP_007864544.1|	-	3.3	6.5	9.4	2.9	6.7	1.5	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4407)
DUF3647	PF12363.3	gi|479324496|ref|YP_007864544.1|	-	3.6	7.7	12.1	5.4	7.1	0.6	3.2	2	2	1	3	3	3	0	Phage	protein
Spt5_N	PF11942.3	gi|479324496|ref|YP_007864544.1|	-	4	8.1	11.7	3	8.5	1.5	2.6	1	1	2	3	3	3	0	Spt5	transcription	elongation	factor,	acidic	N-terminal
SpoVIF	PF14069.1	gi|479324496|ref|YP_007864544.1|	-	6.3	6.5	8.4	0.81	9.4	1.4	2.6	1	1	2	3	3	3	0	Stage	VI	sporulation	protein	F
Carb_kinase	PF01256.12	gi|479324497|ref|YP_007864545.1|	-	1.4e-52	178.4	0.0	2e-52	177.9	0.0	1.2	1	0	0	1	1	1	1	Carbohydrate	kinase
YjeF_N	PF03853.10	gi|479324497|ref|YP_007864545.1|	-	4.2e-43	146.8	0.0	1.8e-42	144.7	0.0	2.0	2	0	0	2	2	2	1	YjeF-related	protein	N-terminus
HK	PF02110.10	gi|479324497|ref|YP_007864545.1|	-	7.5e-08	31.8	0.2	4.4e-07	29.3	0.1	2.0	1	1	0	1	1	1	1	Hydroxyethylthiazole	kinase	family
KR	PF08659.5	gi|479324497|ref|YP_007864545.1|	-	0.0048	16.5	0.0	0.0086	15.7	0.0	1.3	1	0	0	1	1	1	1	KR	domain
NAD_binding_7	PF13241.1	gi|479324497|ref|YP_007864545.1|	-	0.017	15.3	0.0	11	6.3	0.0	2.6	2	0	0	2	2	2	0	Putative	NAD(P)-binding
adh_short	PF00106.20	gi|479324497|ref|YP_007864545.1|	-	0.047	13.5	0.0	0.12	12.3	0.0	1.6	1	0	0	1	1	1	0	short	chain	dehydrogenase
AhpC-TSA	PF00578.16	gi|479324498|ref|YP_007864546.1|	-	8e-43	145.0	0.2	9.9e-43	144.7	0.1	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|479324498|ref|YP_007864546.1|	-	3.9e-26	91.3	0.1	4.5e-26	91.1	0.0	1.1	1	0	0	1	1	1	1	Redoxin
Thioredoxin_8	PF13905.1	gi|479324498|ref|YP_007864546.1|	-	5.9e-07	29.5	0.1	9.9e-07	28.8	0.0	1.4	1	0	0	1	1	1	1	Thioredoxin-like
SCO1-SenC	PF02630.9	gi|479324498|ref|YP_007864546.1|	-	0.00049	19.7	0.4	0.0077	15.8	0.3	2.0	1	1	0	1	1	1	1	SCO1/SenC
AhpC-TSA_2	PF13911.1	gi|479324498|ref|YP_007864546.1|	-	0.0018	18.1	0.1	0.0027	17.6	0.0	1.3	1	0	0	1	1	1	1	AhpC/TSA	antioxidant	enzyme
AAA_22	PF13401.1	gi|479324498|ref|YP_007864546.1|	-	0.0057	16.8	0.1	0.0074	16.4	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
DUF899	PF05988.7	gi|479324498|ref|YP_007864546.1|	-	0.0068	15.8	0.0	0.0081	15.6	0.0	1.1	1	0	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF899)
M60-like	PF13402.1	gi|479324498|ref|YP_007864546.1|	-	0.026	13.4	0.0	0.026	13.4	0.0	1.2	1	0	0	1	1	1	0	Peptidase	M60-like	family
GSHPx	PF00255.14	gi|479324498|ref|YP_007864546.1|	-	0.076	12.3	0.0	0.13	11.6	0.0	1.5	1	0	0	1	1	1	0	Glutathione	peroxidase
PEPcase_2	PF14010.1	gi|479324499|ref|YP_007864547.1|	-	2.1e-203	676.1	0.9	2.3e-203	675.9	0.6	1.0	1	0	0	1	1	1	1	Phosphoenolpyruvate	carboxylase
CbiA	PF01656.18	gi|479324500|ref|YP_007864548.1|	-	0.015	14.7	0.0	0.02	14.3	0.0	1.4	1	1	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
DUF1641	PF07849.6	gi|479324501|ref|YP_007864549.1|	-	8.9e-14	50.8	0.0	2.6e-13	49.3	0.0	1.9	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1641)
NusB	PF01029.13	gi|479324501|ref|YP_007864549.1|	-	0.032	14.1	0.7	4.7	7.2	0.1	2.5	2	1	0	2	2	2	0	NusB	family
Pyr_redox_2	PF07992.9	gi|479324502|ref|YP_007864550.1|	-	2.3e-12	47.2	0.0	4.3e-12	46.3	0.0	1.4	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|479324502|ref|YP_007864550.1|	-	0.018	15.4	0.1	0.91	9.9	0.0	2.6	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Abhydrolase_6	PF12697.2	gi|479324503|ref|YP_007864551.1|	-	5.8e-22	78.6	0.0	7e-14	52.2	0.0	2.0	1	1	1	2	2	2	2	Alpha/beta	hydrolase	family
Abhydrolase_5	PF12695.2	gi|479324503|ref|YP_007864551.1|	-	5e-19	68.4	0.0	5.9e-19	68.2	0.0	1.0	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|479324503|ref|YP_007864551.1|	-	1.1e-13	51.3	0.1	4e-09	36.3	0.0	2.1	1	1	1	2	2	2	2	alpha/beta	hydrolase	fold
Ndr	PF03096.9	gi|479324503|ref|YP_007864551.1|	-	7.1e-06	24.7	0.3	0.00012	20.7	0.3	2.0	1	1	1	2	2	2	1	Ndr	family
Abhydrolase_2	PF02230.11	gi|479324503|ref|YP_007864551.1|	-	0.00052	19.5	0.0	0.00071	19.0	0.0	1.2	1	0	0	1	1	1	1	Phospholipase/Carboxylesterase
DUF3144	PF11342.3	gi|479324503|ref|YP_007864551.1|	-	0.12	12.4	0.0	0.2	11.7	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3144)
DUF2424	PF10340.4	gi|479324503|ref|YP_007864551.1|	-	0.2	10.2	1.1	0.27	9.8	0.2	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2424)
DUF2250	PF10007.4	gi|479324504|ref|YP_007864552.1|	-	2.5e-68	226.0	15.1	2.1e-37	126.9	2.4	2.0	2	0	0	2	2	2	2	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF4393	PF14337.1	gi|479324504|ref|YP_007864552.1|	-	1.4e-05	24.6	1.5	0.0095	15.3	0.1	2.2	1	1	1	2	2	2	2	Domain	of	unknown	function	(DUF4393)
DUF4423	PF14394.1	gi|479324504|ref|YP_007864552.1|	-	2.3e-05	24.0	0.9	0.0015	18.1	0.0	2.2	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4423)
HTH_27	PF13463.1	gi|479324504|ref|YP_007864552.1|	-	0.00027	21.1	3.3	0.22	11.8	0.1	3.8	2	1	1	3	3	3	2	Winged	helix	DNA-binding	domain
HTH_45	PF14947.1	gi|479324504|ref|YP_007864552.1|	-	0.0019	17.9	3.7	0.21	11.4	0.3	3.3	2	1	0	2	2	2	1	Winged	helix-turn-helix
TrmB	PF01978.14	gi|479324504|ref|YP_007864552.1|	-	0.0099	15.5	0.9	0.13	11.9	0.0	2.8	2	1	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HemN_C	PF06969.11	gi|479324504|ref|YP_007864552.1|	-	0.01	15.9	0.2	0.37	10.8	0.0	2.6	2	0	0	2	2	2	0	HemN	C-terminal	domain
DUF4364	PF14277.1	gi|479324504|ref|YP_007864552.1|	-	0.047	13.3	1.5	2	8.0	0.0	2.4	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4364)
MarR_2	PF12802.2	gi|479324504|ref|YP_007864552.1|	-	0.086	12.5	0.1	1.4	8.6	0.0	2.5	2	0	0	2	2	2	0	MarR	family
DUF2806	PF10987.3	gi|479324504|ref|YP_007864552.1|	-	0.1	12.0	0.5	1.5	8.2	0.0	2.4	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2806)
Phage_rep_org_N	PF09681.5	gi|479324504|ref|YP_007864552.1|	-	0.12	11.9	1.2	7.5	6.1	0.1	2.6	2	1	1	3	3	3	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
RPEL	PF02755.10	gi|479324504|ref|YP_007864552.1|	-	1.2	8.5	7.1	0.72	9.2	0.2	3.2	3	0	0	3	3	3	0	RPEL	repeat
ArgK	PF03308.11	gi|479324505|ref|YP_007864553.1|	-	9e-86	286.9	2.2	1.1e-85	286.6	1.5	1.0	1	0	0	1	1	1	1	ArgK	protein
cobW	PF02492.14	gi|479324505|ref|YP_007864553.1|	-	1.6e-08	34.1	1.5	1.3e-07	31.2	1.1	2.1	1	1	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
CbiA	PF01656.18	gi|479324505|ref|YP_007864553.1|	-	1.8e-06	27.5	0.2	4.5e-06	26.2	0.0	1.6	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
DUF87	PF01935.12	gi|479324505|ref|YP_007864553.1|	-	7.1e-05	22.7	3.9	0.0009	19.1	2.7	2.2	1	1	0	1	1	1	1	Domain	of	unknown	function	DUF87
AAA_10	PF12846.2	gi|479324505|ref|YP_007864553.1|	-	0.00023	20.7	0.3	0.00058	19.3	0.1	1.6	2	0	0	2	2	2	1	AAA-like	domain
ATP_bind_1	PF03029.12	gi|479324505|ref|YP_007864553.1|	-	0.00061	19.4	0.1	0.0036	16.8	0.0	2.1	2	1	0	2	2	2	1	Conserved	hypothetical	ATP	binding	protein
MobB	PF03205.9	gi|479324505|ref|YP_007864553.1|	-	0.00066	19.3	0.7	0.0018	18.0	0.1	2.0	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
MipZ	PF09140.6	gi|479324505|ref|YP_007864553.1|	-	0.00084	18.4	0.0	0.0017	17.5	0.0	1.4	1	0	0	1	1	1	1	ATPase	MipZ
TrwB_AAD_bind	PF10412.4	gi|479324505|ref|YP_007864553.1|	-	0.0016	17.1	0.1	0.0027	16.4	0.0	1.2	1	0	0	1	1	1	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
GTP_EFTU	PF00009.22	gi|479324505|ref|YP_007864553.1|	-	0.0023	17.4	0.6	0.3	10.4	0.0	2.4	2	0	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
AAA_17	PF13207.1	gi|479324505|ref|YP_007864553.1|	-	0.0026	18.5	4.4	0.0045	17.7	0.3	2.4	2	1	0	2	2	2	1	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|479324505|ref|YP_007864553.1|	-	0.0032	16.9	0.2	0.014	14.8	0.0	1.9	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
ABC_tran	PF00005.22	gi|479324505|ref|YP_007864553.1|	-	0.0063	16.8	1.2	0.022	15.0	0.1	2.1	2	0	0	2	2	2	1	ABC	transporter
NTPase_1	PF03266.10	gi|479324505|ref|YP_007864553.1|	-	0.0066	16.1	0.2	0.0066	16.1	0.1	2.1	2	0	0	2	2	2	1	NTPase
SRP54	PF00448.17	gi|479324505|ref|YP_007864553.1|	-	0.0067	15.8	0.2	0.059	12.8	0.1	2.1	1	1	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
KAP_NTPase	PF07693.9	gi|479324505|ref|YP_007864553.1|	-	0.019	13.9	0.0	0.044	12.7	0.0	1.5	1	1	0	1	1	1	0	KAP	family	P-loop	domain
MMR_HSR1	PF01926.18	gi|479324505|ref|YP_007864553.1|	-	0.023	14.6	1.2	0.058	13.3	0.8	2.1	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_19	PF13245.1	gi|479324505|ref|YP_007864553.1|	-	0.026	14.2	0.5	0.064	13.0	0.3	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_14	PF13173.1	gi|479324505|ref|YP_007864553.1|	-	0.027	14.3	0.2	0.069	13.0	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
NB-ARC	PF00931.17	gi|479324505|ref|YP_007864553.1|	-	0.028	13.3	0.1	0.028	13.3	0.1	1.6	2	0	0	2	2	2	0	NB-ARC	domain
Viral_helicase1	PF01443.13	gi|479324505|ref|YP_007864553.1|	-	0.055	12.9	0.0	0.093	12.2	0.0	1.4	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
Zeta_toxin	PF06414.7	gi|479324505|ref|YP_007864553.1|	-	0.056	12.5	3.2	0.21	10.6	0.1	2.5	2	1	1	3	3	3	0	Zeta	toxin
AAA_30	PF13604.1	gi|479324505|ref|YP_007864553.1|	-	0.06	12.9	0.1	0.11	12.1	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_18	PF13238.1	gi|479324505|ref|YP_007864553.1|	-	0.1	12.8	5.9	0.11	12.8	0.5	2.4	2	0	0	2	2	2	0	AAA	domain
AAA_22	PF13401.1	gi|479324505|ref|YP_007864553.1|	-	0.11	12.6	0.0	0.4	10.8	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
AAA_29	PF13555.1	gi|479324505|ref|YP_007864553.1|	-	0.11	12.0	0.2	0.23	11.0	0.1	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
B12-binding	PF02310.14	gi|479324506|ref|YP_007864554.1|	-	9.1e-22	77.1	0.6	1.2e-21	76.7	0.3	1.3	1	1	0	1	1	1	1	B12	binding	domain
QRPTase_C	PF01729.14	gi|479324506|ref|YP_007864554.1|	-	0.015	14.8	0.6	0.044	13.3	0.1	1.8	1	1	1	2	2	2	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
Nitro_FeMo-Co	PF02579.12	gi|479324506|ref|YP_007864554.1|	-	0.035	14.1	0.4	6.1	6.9	0.1	2.5	1	1	1	2	2	2	0	Dinitrogenase	iron-molybdenum	cofactor
TPP_enzyme_N	PF02776.13	gi|479324506|ref|YP_007864554.1|	-	0.081	12.4	0.1	3.9	6.9	0.0	2.3	3	0	0	3	3	3	0	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
FMN_dh	PF01070.13	gi|479324506|ref|YP_007864554.1|	-	0.1	11.4	0.2	0.7	8.6	0.1	1.8	1	1	1	2	2	2	0	FMN-dependent	dehydrogenase
PSS	PF03034.10	gi|479324507|ref|YP_007864555.1|	-	0.2	11.0	4.1	0.21	10.9	2.8	1.1	1	0	0	1	1	1	0	Phosphatidyl	serine	synthase
DUF1211	PF06736.6	gi|479324507|ref|YP_007864555.1|	-	0.68	10.1	8.9	0.36	10.9	0.8	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1211)
SUR7	PF06687.7	gi|479324507|ref|YP_007864555.1|	-	8.1	5.9	8.7	1.2e+02	2.0	5.8	2.0	1	1	0	1	1	1	0	SUR7/PalI	family
HTH_20	PF12840.2	gi|479324508|ref|YP_007864556.1|	-	1.8e-06	27.6	0.0	1.1e-05	25.0	0.0	1.9	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|479324508|ref|YP_007864556.1|	-	4.2e-06	26.0	0.1	9.4e-06	24.9	0.1	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.14	gi|479324508|ref|YP_007864556.1|	-	1.9e-05	24.3	0.3	3.7e-05	23.3	0.2	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_27	PF13463.1	gi|479324508|ref|YP_007864556.1|	-	0.00015	22.0	0.0	0.00022	21.4	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_5	PF01022.15	gi|479324508|ref|YP_007864556.1|	-	0.00017	21.1	0.0	0.0003	20.3	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
MarR	PF01047.17	gi|479324508|ref|YP_007864556.1|	-	0.0003	20.4	0.0	0.00056	19.5	0.0	1.4	1	0	0	1	1	1	1	MarR	family
LexA_DNA_bind	PF01726.11	gi|479324508|ref|YP_007864556.1|	-	0.0025	17.3	0.0	0.004	16.6	0.0	1.4	1	0	0	1	1	1	1	LexA	DNA	binding	domain
HTH_36	PF13730.1	gi|479324508|ref|YP_007864556.1|	-	0.0031	17.6	0.0	0.0069	16.4	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_12	PF08461.5	gi|479324508|ref|YP_007864556.1|	-	0.0037	16.9	0.1	0.0063	16.2	0.1	1.4	1	0	0	1	1	1	1	Ribonuclease	R	winged-helix	domain
MarR_2	PF12802.2	gi|479324508|ref|YP_007864556.1|	-	0.0042	16.7	0.0	0.0066	16.0	0.0	1.5	1	0	0	1	1	1	1	MarR	family
HTH_11	PF08279.7	gi|479324508|ref|YP_007864556.1|	-	0.0085	15.7	0.1	0.015	14.9	0.1	1.4	1	0	0	1	1	1	1	HTH	domain
Colicin_V	PF02674.11	gi|479324508|ref|YP_007864556.1|	-	0.02	14.7	2.5	0.031	14.1	1.8	1.2	1	0	0	1	1	1	0	Colicin	V	production	protein
Fe_dep_repress	PF01325.14	gi|479324508|ref|YP_007864556.1|	-	0.026	14.4	0.0	0.051	13.5	0.0	1.5	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_45	PF14947.1	gi|479324508|ref|YP_007864556.1|	-	0.027	14.2	0.0	0.05	13.4	0.0	1.4	1	0	0	1	1	1	0	Winged	helix-turn-helix
DUF2513	PF10711.4	gi|479324508|ref|YP_007864556.1|	-	0.036	14.1	0.0	0.047	13.7	0.0	1.2	1	0	0	1	1	1	0	Hypothetical	protein	(DUF2513)
Rrf2	PF02082.15	gi|479324508|ref|YP_007864556.1|	-	0.099	12.7	0.0	0.21	11.7	0.0	1.5	1	0	0	1	1	1	0	Transcriptional	regulator
EcoRII-N	PF09217.5	gi|479324509|ref|YP_007864557.1|	-	0.11	12.0	1.0	0.32	10.5	0.3	1.8	1	1	1	2	2	2	0	Restriction	endonuclease	EcoRII,	N-terminal
DUF3493	PF11998.3	gi|479324510|ref|YP_007864558.1|	-	0.0064	16.3	0.8	1.5	8.8	0.2	2.3	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF3493)
CTV_P6	PF06706.6	gi|479324510|ref|YP_007864558.1|	-	0.069	12.6	6.6	2.1	7.8	2.6	2.6	2	0	0	2	2	2	0	Citrus	tristeza	virus	6-kDa	protein
Vma12	PF11712.3	gi|479324510|ref|YP_007864558.1|	-	0.15	11.7	1.4	0.28	10.8	0.9	1.5	1	0	0	1	1	1	0	Endoplasmic	reticulum-based	factor	for	assembly	of	V-ATPase
DUF131	PF01998.12	gi|479324510|ref|YP_007864558.1|	-	3.6	7.0	8.0	6.6	6.1	1.8	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF131
Pox_A14	PF05767.7	gi|479324510|ref|YP_007864558.1|	-	5.2	7.0	7.2	74	3.4	4.7	2.7	2	1	0	2	2	2	0	Poxvirus	virion	envelope	protein	A14
TauE	PF01925.14	gi|479324512|ref|YP_007864560.1|	-	1.4e-51	175.2	35.7	1.6e-51	175.0	24.7	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
Gly-zipper_Omp	PF13488.1	gi|479324512|ref|YP_007864560.1|	-	0.057	13.0	0.4	0.057	13.0	0.3	3.8	4	0	0	4	4	4	0	Glycine	zipper
Fe_dep_repr_C	PF02742.10	gi|479324513|ref|YP_007864561.1|	-	6.9e-15	54.5	0.0	1e-14	53.9	0.0	1.3	1	0	0	1	1	1	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
Fe_dep_repress	PF01325.14	gi|479324513|ref|YP_007864561.1|	-	1.3e-07	31.4	0.0	1.7e-07	31.0	0.0	1.2	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_27	PF13463.1	gi|479324513|ref|YP_007864561.1|	-	1.5e-05	25.2	0.0	2.6e-05	24.4	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|479324513|ref|YP_007864561.1|	-	3.6e-05	23.3	0.0	8.2e-05	22.1	0.0	1.6	2	0	0	2	2	1	1	MarR	family
MarR	PF01047.17	gi|479324513|ref|YP_007864561.1|	-	6.6e-05	22.5	0.0	0.00014	21.4	0.0	1.6	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|479324513|ref|YP_007864561.1|	-	0.001	18.7	0.0	0.0014	18.2	0.0	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_45	PF14947.1	gi|479324513|ref|YP_007864561.1|	-	0.0019	18.0	0.1	0.0081	15.9	0.0	1.8	1	1	1	2	2	2	1	Winged	helix-turn-helix
FeoC	PF09012.5	gi|479324513|ref|YP_007864561.1|	-	0.003	17.2	0.0	0.0043	16.7	0.0	1.3	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
HTH_36	PF13730.1	gi|479324513|ref|YP_007864561.1|	-	0.0035	17.4	0.0	0.0074	16.3	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_IclR	PF09339.5	gi|479324513|ref|YP_007864561.1|	-	0.0052	16.3	0.0	0.0086	15.6	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
DUF4423	PF14394.1	gi|479324513|ref|YP_007864561.1|	-	0.0073	15.8	0.0	0.0092	15.5	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
LexA_DNA_bind	PF01726.11	gi|479324513|ref|YP_007864561.1|	-	0.013	15.0	0.0	0.022	14.3	0.0	1.4	1	0	0	1	1	1	0	LexA	DNA	binding	domain
B-block_TFIIIC	PF04182.7	gi|479324513|ref|YP_007864561.1|	-	0.017	14.9	0.0	0.033	14.0	0.0	1.7	1	1	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
HTH_24	PF13412.1	gi|479324513|ref|YP_007864561.1|	-	0.02	14.2	0.0	0.039	13.3	0.0	1.5	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
DUF417	PF04224.7	gi|479324513|ref|YP_007864561.1|	-	0.022	14.1	0.0	0.029	13.7	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF417
DUF2250	PF10007.4	gi|479324513|ref|YP_007864561.1|	-	0.031	14.1	0.0	0.044	13.6	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
MotA_activ	PF09114.5	gi|479324513|ref|YP_007864561.1|	-	0.057	13.1	0.1	0.086	12.6	0.1	1.3	1	0	0	1	1	1	0	Transcription	factor	MotA,	activation	domain
HTH_38	PF13936.1	gi|479324513|ref|YP_007864561.1|	-	0.09	12.3	0.0	0.16	11.5	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|479324513|ref|YP_007864561.1|	-	0.093	12.8	0.0	0.14	12.2	0.0	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
DHDPS	PF00701.17	gi|479324514|ref|YP_007864562.1|	-	1.3e-56	191.3	0.0	1.5e-56	191.1	0.0	1.0	1	0	0	1	1	1	1	Dihydrodipicolinate	synthetase	family
DUF2303	PF10065.4	gi|479324514|ref|YP_007864562.1|	-	0.072	11.9	0.0	0.11	11.3	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2303)
UDG	PF03167.14	gi|479324515|ref|YP_007864563.1|	-	2e-41	141.0	0.0	2.4e-41	140.7	0.0	1.1	1	0	0	1	1	1	1	Uracil	DNA	glycosylase	superfamily
adh_short_C2	PF13561.1	gi|479324516|ref|YP_007864564.1|	-	2.3e-30	106.1	0.0	3.2e-30	105.6	0.0	1.1	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|479324516|ref|YP_007864564.1|	-	1.8e-14	53.9	0.0	3.2e-14	53.2	0.0	1.4	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|479324516|ref|YP_007864564.1|	-	5e-06	26.3	0.0	8.5e-06	25.5	0.0	1.3	1	0	0	1	1	1	1	KR	domain
NAD_binding_10	PF13460.1	gi|479324516|ref|YP_007864564.1|	-	0.0044	17.0	0.0	0.0062	16.5	0.0	1.4	1	0	0	1	1	1	1	NADH(P)-binding
Eno-Rase_NADH_b	PF12242.3	gi|479324516|ref|YP_007864564.1|	-	0.021	14.5	0.6	0.051	13.3	0.1	1.8	2	0	0	2	2	2	0	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
THF_DHG_CYH_C	PF02882.14	gi|479324516|ref|YP_007864564.1|	-	0.062	12.3	0.0	0.11	11.5	0.0	1.4	1	0	0	1	1	1	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
Polysacc_synt_2	PF02719.10	gi|479324516|ref|YP_007864564.1|	-	0.12	11.2	0.0	0.47	9.2	0.0	1.8	2	0	0	2	2	2	0	Polysaccharide	biosynthesis	protein
AAA_21	PF13304.1	gi|479324517|ref|YP_007864565.1|	-	9.3e-19	68.4	5.3	9.3e-19	68.4	3.7	2.3	2	1	0	2	2	2	1	AAA	domain
AAA_15	PF13175.1	gi|479324517|ref|YP_007864565.1|	-	6.9e-17	61.5	8.8	2.4e-14	53.2	0.6	2.7	1	1	1	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|479324517|ref|YP_007864565.1|	-	0.0005	19.3	1.2	0.0026	17.0	0.8	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|479324517|ref|YP_007864565.1|	-	0.0088	16.3	0.1	0.0088	16.3	0.1	2.1	2	0	0	2	2	2	1	AAA	domain
MAGE	PF01454.14	gi|479324517|ref|YP_007864565.1|	-	0.022	14.1	2.4	1.9	7.7	0.3	2.8	3	0	0	3	3	3	0	MAGE	family
Peptidase_M3	PF01432.15	gi|479324517|ref|YP_007864565.1|	-	0.083	11.9	0.1	0.12	11.3	0.1	1.1	1	0	0	1	1	1	0	Peptidase	family	M3
DUF131	PF01998.12	gi|479324518|ref|YP_007864566.1|	-	9.4e-17	60.1	10.9	9.4e-17	60.1	7.6	1.9	1	1	1	2	2	2	1	Protein	of	unknown	function	DUF131
Claudin_3	PF06653.6	gi|479324518|ref|YP_007864566.1|	-	0.0017	18.0	4.4	0.0019	17.9	3.0	1.0	1	0	0	1	1	1	1	Tight	junction	protein,	Claudin-like
TctB	PF07331.6	gi|479324518|ref|YP_007864566.1|	-	0.017	14.7	5.6	0.04	13.5	3.8	1.5	1	1	0	1	1	1	0	Tripartite	tricarboxylate	transporter	TctB	family
DUF4064	PF13273.1	gi|479324518|ref|YP_007864566.1|	-	0.021	14.9	9.0	0.026	14.6	6.2	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4064)
Cytochrom_B_N	PF00033.14	gi|479324518|ref|YP_007864566.1|	-	0.037	13.3	2.8	0.044	13.1	1.9	1.1	1	0	0	1	1	1	0	Cytochrome	b(N-terminal)/b6/petB
Baculo_11_kDa	PF06143.6	gi|479324518|ref|YP_007864566.1|	-	0.11	11.9	6.8	2.5	7.5	2.3	2.1	2	0	0	2	2	2	0	Baculovirus	11	kDa	family
DUF4097	PF13349.1	gi|479324518|ref|YP_007864566.1|	-	0.15	11.5	0.4	0.15	11.5	0.2	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4097)
DUF872	PF05915.7	gi|479324518|ref|YP_007864566.1|	-	0.26	11.1	3.9	0.093	12.5	0.7	1.7	1	1	1	2	2	2	0	Eukaryotic	protein	of	unknown	function	(DUF872)
DUF1206	PF06724.6	gi|479324518|ref|YP_007864566.1|	-	0.35	10.6	2.8	14	5.4	0.0	2.4	2	0	0	2	2	2	0	Domain	of	Unknown	Function	(DUF1206)
YfhO	PF09586.5	gi|479324518|ref|YP_007864566.1|	-	0.58	8.1	3.6	0.64	7.9	2.5	1.0	1	0	0	1	1	1	0	Bacterial	membrane	protein	YfhO
P12	PF12669.2	gi|479324518|ref|YP_007864566.1|	-	1.3	9.2	0.0	1.3	9.2	0.0	2.3	2	0	0	2	2	2	0	Virus	attachment	protein	p12	family
DUF3784	PF12650.2	gi|479324518|ref|YP_007864566.1|	-	2.1	8.3	15.1	0.8	9.6	1.6	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3784)
Fig1	PF12351.3	gi|479324518|ref|YP_007864566.1|	-	2.7	7.8	6.8	5.9	6.7	4.7	1.5	1	1	0	1	1	1	0	Ca2+	regulator	and	membrane	fusion	protein	Fig1
ATP-synt_8	PF00895.15	gi|479324518|ref|YP_007864566.1|	-	3	8.1	5.1	16	5.7	1.5	2.1	2	0	0	2	2	2	0	ATP	synthase	protein	8
DUF973	PF06157.6	gi|479324518|ref|YP_007864566.1|	-	3.3	6.5	15.0	16	4.3	10.3	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF973)
EphA2_TM	PF14575.1	gi|479324518|ref|YP_007864566.1|	-	3.8	7.9	5.7	12	6.4	0.0	2.2	2	0	0	2	2	2	0	Ephrin	type-A	receptor	2	transmembrane	domain
DUF1517	PF07466.6	gi|479324518|ref|YP_007864566.1|	-	4.4	6.2	8.0	1.3	7.9	0.1	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1517)
DUF3185	PF11381.3	gi|479324518|ref|YP_007864566.1|	-	4.6	7.0	14.6	0.042	13.5	2.9	2.5	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF3185)
DUF202	PF02656.10	gi|479324518|ref|YP_007864566.1|	-	4.6	7.5	7.5	36	4.6	5.2	2.1	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF202)
ODV-E18	PF10717.4	gi|479324518|ref|YP_007864566.1|	-	5.2	6.5	11.3	0.51	9.8	0.3	2.1	2	0	0	2	2	2	0	Occlusion-derived	virus	envelope	protein	ODV-E18
DUF2892	PF11127.3	gi|479324518|ref|YP_007864566.1|	-	5.9	6.8	7.3	0.93	9.3	0.2	2.2	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2892)
DUF4083	PF13314.1	gi|479324518|ref|YP_007864566.1|	-	6.2	6.7	11.9	0.59	9.9	0.3	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4083)
m04gp34like	PF12216.3	gi|479324519|ref|YP_007864567.1|	-	0.0035	16.7	0.5	0.0068	15.7	0.3	1.5	1	0	0	1	1	1	1	Immune	evasion	protein
DUF3108	PF11306.3	gi|479324519|ref|YP_007864567.1|	-	0.1	12.2	0.3	0.78	9.3	0.0	2.3	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3108)
NUDIX	PF00293.23	gi|479324520|ref|YP_007864568.1|	-	3.5e-20	72.0	0.0	7.5e-20	70.9	0.0	1.5	1	1	0	1	1	1	1	NUDIX	domain
NUDIX_4	PF14815.1	gi|479324520|ref|YP_007864568.1|	-	1.4e-05	24.5	0.0	1.7e-05	24.2	0.0	1.3	1	1	0	1	1	1	1	NUDIX	domain
NUDIX_2	PF13869.1	gi|479324520|ref|YP_007864568.1|	-	0.078	12.3	0.0	0.1	11.8	0.0	1.2	1	0	0	1	1	1	0	Nucleotide	hydrolase
tRNA-synt_1e	PF01406.14	gi|479324521|ref|YP_007864569.1|	-	1.9e-124	414.6	1.1	1.9e-124	414.6	0.7	1.6	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1g	PF09334.6	gi|479324521|ref|YP_007864569.1|	-	7.4e-18	64.3	2.1	2.7e-09	36.1	0.6	2.2	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(M)
tRNA-synt_1	PF00133.17	gi|479324521|ref|YP_007864569.1|	-	5.2e-07	28.0	0.0	0.00053	18.1	0.0	2.2	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(I,	L,	M	and	V)
DALR_2	PF09190.6	gi|479324521|ref|YP_007864569.1|	-	1.4e-05	25.2	0.0	3.4e-05	23.9	0.0	1.7	1	0	0	1	1	1	1	DALR	domain
tRNA-synt_1f	PF01921.13	gi|479324521|ref|YP_007864569.1|	-	8e-05	21.4	0.6	0.00076	18.2	0.0	2.3	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(K)
tRNA-synt_1d	PF00750.14	gi|479324521|ref|YP_007864569.1|	-	0.00062	18.6	1.1	0.0013	17.5	0.2	1.9	1	1	1	2	2	2	1	tRNA	synthetases	class	I	(R)
tRNA-synt_1c	PF00749.16	gi|479324521|ref|YP_007864569.1|	-	0.011	14.4	3.3	0.052	12.2	0.2	3.2	3	1	0	3	3	3	0	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
bact-PGI_C	PF10432.4	gi|479324522|ref|YP_007864570.1|	-	4.8e-31	107.5	0.8	1e-30	106.4	0.6	1.6	1	1	0	1	1	1	1	Bacterial	phospho-glucose	isomerase	C-terminal	region
SIS	PF01380.17	gi|479324522|ref|YP_007864570.1|	-	0.0073	15.9	1.4	0.25	10.9	0.1	2.6	3	0	0	3	3	3	1	SIS	domain
PMBR	PF09373.5	gi|479324522|ref|YP_007864570.1|	-	0.044	13.7	0.2	0.16	11.9	0.1	2.1	2	0	0	2	2	2	0	Pseudomurein-binding	repeat
ESAG1	PF03238.8	gi|479324523|ref|YP_007864571.1|	-	0.015	14.5	0.3	0.016	14.5	0.2	1.1	1	0	0	1	1	1	0	ESAG	protein
Pyr_redox_2	PF07992.9	gi|479324524|ref|YP_007864572.1|	-	1.7e-29	103.1	0.0	1e-28	100.6	0.0	2.7	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|479324524|ref|YP_007864572.1|	-	2.1e-20	72.9	3.8	7.2e-15	55.1	0.6	3.5	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|479324524|ref|YP_007864572.1|	-	9.3e-18	64.2	0.6	2.1e-17	63.1	0.4	1.6	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox_3	PF13738.1	gi|479324524|ref|YP_007864572.1|	-	1.7e-11	44.5	0.0	3.7e-08	33.6	0.0	2.5	3	0	0	3	3	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|479324524|ref|YP_007864572.1|	-	5.4e-08	31.7	0.8	0.017	13.5	0.0	3.4	3	0	0	3	3	3	2	HI0933-like	protein
NAD_binding_8	PF13450.1	gi|479324524|ref|YP_007864572.1|	-	9.4e-08	31.9	0.1	0.0026	17.7	0.0	2.7	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
DAO	PF01266.19	gi|479324524|ref|YP_007864572.1|	-	7.7e-07	28.3	1.2	0.054	12.3	0.0	3.5	4	0	0	4	4	4	2	FAD	dependent	oxidoreductase
NAD_binding_9	PF13454.1	gi|479324524|ref|YP_007864572.1|	-	4.5e-05	23.2	2.5	0.62	9.8	0.0	3.6	2	1	0	3	3	3	1	FAD-NAD(P)-binding
K_oxygenase	PF13434.1	gi|479324524|ref|YP_007864572.1|	-	0.00014	20.8	0.0	0.0005	19.0	0.0	1.8	2	0	0	2	2	2	1	L-lysine	6-monooxygenase	(NADPH-requiring)
GIDA	PF01134.17	gi|479324524|ref|YP_007864572.1|	-	0.00015	20.7	0.4	0.46	9.2	0.0	3.2	3	0	0	3	3	3	2	Glucose	inhibited	division	protein	A
Trp_halogenase	PF04820.9	gi|479324524|ref|YP_007864572.1|	-	0.001	17.8	1.3	0.0092	14.6	0.0	2.2	2	0	0	2	2	2	1	Tryptophan	halogenase
Lycopene_cycl	PF05834.7	gi|479324524|ref|YP_007864572.1|	-	0.0017	17.3	1.1	0.33	9.8	0.0	2.7	2	1	0	2	2	2	1	Lycopene	cyclase	protein
FAD_binding_2	PF00890.19	gi|479324524|ref|YP_007864572.1|	-	0.002	17.0	2.2	0.1	11.4	0.0	3.1	4	0	0	4	4	4	1	FAD	binding	domain
TrkA_N	PF02254.13	gi|479324524|ref|YP_007864572.1|	-	0.0023	17.9	0.9	0.051	13.5	0.1	2.8	3	0	0	3	3	2	1	TrkA-N	domain
NAD_Gly3P_dh_N	PF01210.18	gi|479324524|ref|YP_007864572.1|	-	0.032	13.9	0.2	0.4	10.3	0.0	2.3	2	0	0	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Mqo	PF06039.10	gi|479324524|ref|YP_007864572.1|	-	0.033	12.3	0.1	0.088	10.9	0.0	1.7	2	0	0	2	2	2	0	Malate:quinone	oxidoreductase	(Mqo)
ApbA	PF02558.11	gi|479324524|ref|YP_007864572.1|	-	0.034	13.5	0.4	0.71	9.3	0.1	2.5	2	0	0	2	2	2	0	Ketopantoate	reductase	PanE/ApbA
F420_oxidored	PF03807.12	gi|479324524|ref|YP_007864572.1|	-	0.045	14.1	1.9	0.14	12.6	0.3	2.5	2	0	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
FAD_binding_3	PF01494.14	gi|479324524|ref|YP_007864572.1|	-	0.2	10.6	2.8	2.1	7.3	0.2	2.3	2	0	0	2	2	2	0	FAD	binding	domain
NurA	PF09376.5	gi|479324525|ref|YP_007864573.1|	-	2e-22	79.8	0.7	2.7e-22	79.4	0.5	1.2	1	0	0	1	1	1	1	NurA	domain
AAA_10	PF12846.2	gi|479324526|ref|YP_007864574.1|	-	3.3e-22	79.3	1.1	3.1e-15	56.4	0.2	2.1	2	0	0	2	2	2	2	AAA-like	domain
DUF87	PF01935.12	gi|479324526|ref|YP_007864574.1|	-	7.1e-14	52.1	1.3	3e-12	46.8	0.8	3.0	1	1	0	1	1	1	1	Domain	of	unknown	function	DUF87
TrwB_AAD_bind	PF10412.4	gi|479324526|ref|YP_007864574.1|	-	1e-07	30.9	0.0	4.4e-07	28.8	0.0	1.9	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
DUF853	PF05872.7	gi|479324526|ref|YP_007864574.1|	-	2.1e-07	29.6	0.0	0.001	17.5	0.0	2.1	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
AAA	PF00004.24	gi|479324526|ref|YP_007864574.1|	-	2.2e-06	27.8	0.1	0.0026	17.9	0.0	2.5	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
FtsK_SpoIIIE	PF01580.13	gi|479324526|ref|YP_007864574.1|	-	1.9e-05	24.2	0.0	0.00013	21.5	0.0	1.9	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
AAA_22	PF13401.1	gi|479324526|ref|YP_007864574.1|	-	2e-05	24.7	0.0	0.15	12.2	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
Zot	PF05707.7	gi|479324526|ref|YP_007864574.1|	-	0.00016	21.2	0.0	0.0017	17.8	0.0	2.3	2	0	0	2	2	2	1	Zonular	occludens	toxin	(Zot)
Pox_A32	PF04665.7	gi|479324526|ref|YP_007864574.1|	-	0.002	17.4	0.0	0.0037	16.5	0.0	1.4	1	0	0	1	1	1	1	Poxvirus	A32	protein
ResIII	PF04851.10	gi|479324526|ref|YP_007864574.1|	-	0.0021	17.9	0.1	0.33	10.7	0.0	2.3	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
UPF0079	PF02367.12	gi|479324526|ref|YP_007864574.1|	-	0.0088	15.6	0.0	0.018	14.6	0.0	1.5	1	0	0	1	1	1	1	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_24	PF13479.1	gi|479324526|ref|YP_007864574.1|	-	0.022	14.3	0.0	0.041	13.4	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Miro	PF08477.8	gi|479324526|ref|YP_007864574.1|	-	0.025	15.0	0.0	0.083	13.3	0.0	1.9	2	0	0	2	2	1	0	Miro-like	protein
AAA_25	PF13481.1	gi|479324526|ref|YP_007864574.1|	-	0.027	13.8	0.0	5.2	6.4	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
DUF2075	PF09848.4	gi|479324526|ref|YP_007864574.1|	-	0.17	10.8	0.0	2.5	6.9	0.0	2.1	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
T2SE	PF00437.15	gi|479324526|ref|YP_007864574.1|	-	0.2	10.4	0.2	0.59	8.9	0.0	1.8	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
DUF4116	PF13475.1	gi|479324527|ref|YP_007864575.1|	-	0.82	9.1	3.2	4.8	6.7	0.2	2.8	2	2	0	2	2	2	0	Domain	of	unknown	function	(DUF4116)
Erp_C	PF06780.6	gi|479324527|ref|YP_007864575.1|	-	0.96	9.2	3.7	4.3	7.1	0.3	2.3	1	1	0	2	2	2	0	Erp	protein	C-terminus
4HBT	PF03061.17	gi|479324528|ref|YP_007864576.1|	-	1.1e-18	67.0	0.2	1.3e-08	34.8	0.1	2.4	2	0	0	2	2	2	2	Thioesterase	superfamily
4HBT_2	PF13279.1	gi|479324528|ref|YP_007864576.1|	-	3.5e-08	33.9	0.1	0.0092	16.4	0.0	2.3	1	1	0	2	2	2	2	Thioesterase-like	superfamily
DUF3938	PF13074.1	gi|479324529|ref|YP_007864577.1|	-	4.9	7.0	8.3	3.8	7.4	0.1	3.5	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3938)
adh_short_C2	PF13561.1	gi|479324530|ref|YP_007864578.1|	-	3.9e-33	115.1	0.0	5e-33	114.8	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|479324530|ref|YP_007864578.1|	-	5.8e-29	101.1	0.0	1.2e-28	100.1	0.0	1.5	2	0	0	2	2	2	1	short	chain	dehydrogenase
KR	PF08659.5	gi|479324530|ref|YP_007864578.1|	-	2e-09	37.3	0.0	3.3e-09	36.6	0.0	1.3	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.16	gi|479324530|ref|YP_007864578.1|	-	9e-05	22.0	0.0	0.00017	21.1	0.0	1.5	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
NAD_binding_10	PF13460.1	gi|479324530|ref|YP_007864578.1|	-	0.0015	18.5	0.0	0.0027	17.7	0.0	1.4	1	0	0	1	1	1	1	NADH(P)-binding
Polysacc_synt_2	PF02719.10	gi|479324530|ref|YP_007864578.1|	-	0.0025	16.7	0.1	0.0034	16.3	0.0	1.2	1	0	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NmrA	PF05368.8	gi|479324530|ref|YP_007864578.1|	-	0.0043	16.3	0.3	0.014	14.6	0.1	2.0	2	1	0	2	2	2	1	NmrA-like	family
3Beta_HSD	PF01073.14	gi|479324530|ref|YP_007864578.1|	-	0.025	13.2	0.1	0.041	12.5	0.1	1.3	1	0	0	1	1	1	0	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
DUF3822	PF12864.2	gi|479324530|ref|YP_007864578.1|	-	0.037	13.2	0.1	0.072	12.3	0.0	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3822)
TrkA_N	PF02254.13	gi|479324530|ref|YP_007864578.1|	-	0.04	13.9	0.1	0.14	12.1	0.0	1.9	2	0	0	2	2	2	0	TrkA-N	domain
Exo_endo_phos	PF03372.18	gi|479324531|ref|YP_007864579.1|	-	3.2e-15	56.7	0.0	3.8e-15	56.5	0.0	1.0	1	0	0	1	1	1	1	Endonuclease/Exonuclease/phosphatase	family
Exo_endo_phos_2	PF14529.1	gi|479324531|ref|YP_007864579.1|	-	1.4e-14	53.6	0.0	1.9e-14	53.3	0.0	1.1	1	0	0	1	1	1	1	Endonuclease-reverse	transcriptase
Pkinase	PF00069.20	gi|479324532|ref|YP_007864580.1|	-	1.2e-17	63.9	0.0	1.6e-17	63.4	0.0	1.2	1	0	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|479324532|ref|YP_007864580.1|	-	1.2e-06	27.7	0.0	1.7e-06	27.3	0.0	1.2	1	0	0	1	1	1	1	Protein	tyrosine	kinase
DUF3816	PF12822.2	gi|479324532|ref|YP_007864580.1|	-	0.021	14.7	20.3	0.039	13.8	14.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3816)
AA_permease_2	PF13520.1	gi|479324533|ref|YP_007864581.1|	-	8.8e-40	136.5	59.7	1.1e-39	136.1	41.4	1.1	1	0	0	1	1	1	1	Amino	acid	permease
HEPN	PF05168.9	gi|479324534|ref|YP_007864582.1|	-	2.7e-14	53.0	0.2	3.3e-14	52.7	0.1	1.0	1	0	0	1	1	1	1	HEPN	domain
4HBT_2	PF13279.1	gi|479324535|ref|YP_007864583.1|	-	3.3e-09	37.2	0.0	4.1e-09	36.9	0.0	1.1	1	0	0	1	1	1	1	Thioesterase-like	superfamily
4HBT	PF03061.17	gi|479324535|ref|YP_007864583.1|	-	6.3e-07	29.4	0.0	8.4e-07	29.0	0.0	1.2	1	0	0	1	1	1	1	Thioesterase	superfamily
TP_methylase	PF00590.15	gi|479324536|ref|YP_007864584.1|	-	1.2e-33	116.6	0.0	1.5e-33	116.2	0.0	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
CbiG_N	PF11760.3	gi|479324537|ref|YP_007864585.1|	-	1.8e-28	98.0	0.1	5.9e-28	96.4	0.0	2.0	1	0	0	1	1	1	1	Cobalamin	synthesis	G	N-terminal
CbiG_C	PF01890.11	gi|479324537|ref|YP_007864585.1|	-	8.9e-19	67.9	0.1	1.9e-18	66.8	0.0	1.6	1	0	0	1	1	1	1	Cobalamin	synthesis	G	C-terminus
TP_methylase	PF00590.15	gi|479324538|ref|YP_007864586.1|	-	3.9e-46	157.4	0.3	4.7e-46	157.1	0.2	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
TP_methylase	PF00590.15	gi|479324539|ref|YP_007864587.1|	-	1.9e-34	119.2	0.0	2.3e-34	118.9	0.0	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
Mut7-C	PF01927.11	gi|479324539|ref|YP_007864587.1|	-	0.072	13.0	0.1	0.12	12.3	0.1	1.3	1	0	0	1	1	1	0	Mut7-C	RNAse	domain
Methyltransf_18	PF12847.2	gi|479324540|ref|YP_007864588.1|	-	9e-18	64.8	0.0	1.3e-17	64.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|479324540|ref|YP_007864588.1|	-	1.6e-15	57.0	0.3	2.3e-15	56.5	0.2	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|479324540|ref|YP_007864588.1|	-	3.2e-12	46.1	1.5	4.2e-12	45.7	1.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
PCMT	PF01135.14	gi|479324540|ref|YP_007864588.1|	-	5.8e-12	45.5	0.1	7.5e-12	45.2	0.1	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_3	PF01596.12	gi|479324540|ref|YP_007864588.1|	-	1e-10	41.0	0.2	1.2e-10	40.7	0.1	1.1	1	0	0	1	1	1	1	O-methyltransferase
Ubie_methyltran	PF01209.13	gi|479324540|ref|YP_007864588.1|	-	1.1e-10	41.1	0.3	1.3e-10	40.7	0.2	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
GCD14	PF08704.5	gi|479324540|ref|YP_007864588.1|	-	1.1e-09	38.1	0.0	1.4e-09	37.8	0.0	1.0	1	0	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
UPF0020	PF01170.13	gi|479324540|ref|YP_007864588.1|	-	1.5e-09	37.6	0.0	2.4e-09	37.0	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
MTS	PF05175.9	gi|479324540|ref|YP_007864588.1|	-	9.8e-09	34.8	0.0	1.8e-08	33.9	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_24	PF13578.1	gi|479324540|ref|YP_007864588.1|	-	5.3e-08	33.6	0.0	7e-08	33.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.15	gi|479324540|ref|YP_007864588.1|	-	7e-08	31.8	0.0	1.2e-07	31.1	0.0	1.3	1	1	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_26	PF13659.1	gi|479324540|ref|YP_007864588.1|	-	7.6e-08	32.3	0.0	1.9e-07	31.1	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|479324540|ref|YP_007864588.1|	-	9.3e-08	32.4	0.0	1.4e-07	31.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|479324540|ref|YP_007864588.1|	-	8.4e-07	28.6	0.1	1.6e-06	27.7	0.0	1.3	1	1	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_25	PF13649.1	gi|479324540|ref|YP_007864588.1|	-	1.4e-06	28.5	0.0	2e-06	28.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|479324540|ref|YP_007864588.1|	-	3.2e-05	23.3	0.0	4e-05	23.1	0.0	1.2	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltransf_12	PF08242.7	gi|479324540|ref|YP_007864588.1|	-	7.5e-05	23.1	0.0	0.00014	22.2	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_4	PF02390.12	gi|479324540|ref|YP_007864588.1|	-	8e-05	21.7	0.5	0.0002	20.4	0.0	1.8	2	0	0	2	2	2	1	Putative	methyltransferase
DOT1	PF08123.8	gi|479324540|ref|YP_007864588.1|	-	8.6e-05	21.9	0.0	0.00015	21.1	0.0	1.4	1	0	0	1	1	1	1	Histone	methylation	protein	DOT1
Fibrillarin	PF01269.12	gi|479324540|ref|YP_007864588.1|	-	0.0002	20.3	0.0	0.00026	20.0	0.0	1.2	1	0	0	1	1	1	1	Fibrillarin
Nol1_Nop2_Fmu	PF01189.12	gi|479324540|ref|YP_007864588.1|	-	0.00052	19.4	0.0	0.0078	15.6	0.0	2.2	1	1	2	3	3	3	1	NOL1/NOP2/sun	family
Methyltransf_23	PF13489.1	gi|479324540|ref|YP_007864588.1|	-	0.00058	19.6	0.0	0.00077	19.2	0.0	1.3	1	1	0	1	1	1	1	Methyltransferase	domain
Met_10	PF02475.11	gi|479324540|ref|YP_007864588.1|	-	0.0013	18.3	0.0	0.0019	17.8	0.0	1.4	1	1	0	1	1	1	1	Met-10+	like-protein
Methyltransf_32	PF13679.1	gi|479324540|ref|YP_007864588.1|	-	0.0027	17.4	0.0	0.0036	16.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
FtsJ	PF01728.14	gi|479324540|ref|YP_007864588.1|	-	0.012	15.6	0.0	0.054	13.4	0.0	1.9	1	1	0	1	1	1	0	FtsJ-like	methyltransferase
N6_Mtase	PF02384.11	gi|479324540|ref|YP_007864588.1|	-	0.02	13.9	0.0	0.029	13.4	0.0	1.2	1	0	0	1	1	1	0	N-6	DNA	Methylase
N6_N4_Mtase	PF01555.13	gi|479324540|ref|YP_007864588.1|	-	0.022	14.2	0.4	0.052	13.0	0.0	1.7	2	0	0	2	2	2	0	DNA	methylase
TehB	PF03848.9	gi|479324540|ref|YP_007864588.1|	-	0.031	13.4	0.0	0.055	12.6	0.0	1.4	1	1	0	1	1	1	0	Tellurite	resistance	protein	TehB
CmcI	PF04989.7	gi|479324540|ref|YP_007864588.1|	-	0.035	13.4	0.0	0.048	12.9	0.0	1.3	1	1	0	1	1	1	0	Cephalosporin	hydroxylase
RrnaAD	PF00398.15	gi|479324540|ref|YP_007864588.1|	-	0.063	12.2	0.0	0.086	11.8	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	RNA	adenine	dimethylase
TRM	PF02005.11	gi|479324540|ref|YP_007864588.1|	-	0.097	11.5	0.0	0.14	11.0	0.0	1.3	1	0	0	1	1	1	0	N2,N2-dimethylguanosine	tRNA	methyltransferase
CbiD	PF01888.12	gi|479324541|ref|YP_007864589.1|	-	2.4e-64	216.8	5.7	3e-64	216.5	4.0	1.1	1	0	0	1	1	1	1	CbiD
TP_methylase	PF00590.15	gi|479324542|ref|YP_007864590.1|	-	1.7e-36	125.9	0.0	2e-36	125.7	0.0	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
DUF2325	PF10087.4	gi|479324542|ref|YP_007864590.1|	-	0.13	12.1	0.0	0.37	10.6	0.0	1.8	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2325)
CbiC	PF02570.10	gi|479324543|ref|YP_007864591.1|	-	7e-49	165.9	2.5	8.9e-49	165.6	1.7	1.1	1	0	0	1	1	1	1	Precorrin-8X	methylmutase
CbiX	PF01903.12	gi|479324543|ref|YP_007864591.1|	-	9e-21	73.9	0.0	1.7e-20	73.0	0.0	1.5	1	0	0	1	1	1	1	CbiX
DUF3463	PF11946.3	gi|479324545|ref|YP_007864593.1|	-	1.6e-30	105.4	2.2	2.4e-30	104.9	1.5	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3463)
Radical_SAM	PF04055.16	gi|479324545|ref|YP_007864593.1|	-	1.4e-17	64.3	0.1	2.8e-17	63.3	0.0	1.5	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|479324545|ref|YP_007864593.1|	-	2e-07	31.2	1.2	1.8e-06	28.1	0.0	2.5	2	1	1	3	3	3	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|479324545|ref|YP_007864593.1|	-	1.9e-05	24.6	0.1	0.00012	22.0	0.0	2.3	3	0	0	3	3	3	1	4Fe-4S	single	cluster	domain
Lactamase_B	PF00753.22	gi|479324546|ref|YP_007864594.1|	-	7e-08	32.3	4.4	6.9e-07	29.1	3.1	2.4	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|479324546|ref|YP_007864594.1|	-	1.3e-05	24.8	0.0	2e-05	24.2	0.0	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
IncA	PF04156.9	gi|479324547|ref|YP_007864595.1|	-	1.1	8.7	8.6	1.9	8.0	0.3	2.6	2	0	0	2	2	2	0	IncA	protein
DUF3754	PF12576.3	gi|479324547|ref|YP_007864595.1|	-	3.4	7.3	9.2	1.4	8.5	0.1	3.0	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3754)
T2SE	PF00437.15	gi|479324548|ref|YP_007864596.1|	-	0.0027	16.6	0.0	0.0031	16.4	0.0	1.0	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
3H	PF02829.9	gi|479324548|ref|YP_007864596.1|	-	0.02	14.8	0.0	0.028	14.4	0.0	1.2	1	0	0	1	1	1	0	3H	domain
Acyl_transf_3	PF01757.17	gi|479324549|ref|YP_007864597.1|	-	0.041	12.7	1.0	0.042	12.6	0.7	1.0	1	0	0	1	1	1	0	Acyltransferase	family
DUF3955	PF13127.1	gi|479324549|ref|YP_007864597.1|	-	0.12	11.8	2.1	2.8	7.5	0.2	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3955)
DUF2964	PF11177.3	gi|479324549|ref|YP_007864597.1|	-	0.62	10.0	3.6	1.9	8.5	2.5	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2964)
RHH_1	PF01402.16	gi|479324550|ref|YP_007864598.1|	-	9.9e-06	25.2	0.0	1.4e-05	24.7	0.0	1.3	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
DUF1655	PF07868.6	gi|479324550|ref|YP_007864598.1|	-	0.079	12.9	0.4	0.2	11.6	0.1	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1655)
Stk19	PF10494.4	gi|479324550|ref|YP_007864598.1|	-	0.11	11.8	0.7	0.11	11.8	0.5	1.0	1	0	0	1	1	1	0	Serine-threonine	protein	kinase	19
CbiA	PF01656.18	gi|479324551|ref|YP_007864599.1|	-	8.3e-12	44.9	0.1	4.8e-11	42.4	0.1	1.9	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.1	gi|479324551|ref|YP_007864599.1|	-	3.6e-11	43.2	1.6	6.3e-11	42.4	0.3	1.9	2	1	0	2	2	2	1	AAA	domain
ArsA_ATPase	PF02374.10	gi|479324551|ref|YP_007864599.1|	-	2.5e-05	23.5	1.3	0.00013	21.1	0.1	2.4	1	1	1	2	2	2	1	Anion-transporting	ATPase
SRP54	PF00448.17	gi|479324551|ref|YP_007864599.1|	-	0.0027	17.1	0.1	0.15	11.4	0.0	2.2	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
MipZ	PF09140.6	gi|479324551|ref|YP_007864599.1|	-	0.0036	16.4	0.0	0.0098	15.0	0.0	1.6	1	1	0	1	1	1	1	ATPase	MipZ
YhjQ	PF06564.7	gi|479324551|ref|YP_007864599.1|	-	0.046	13.0	0.0	0.1	11.9	0.0	1.5	1	0	0	1	1	1	0	YhjQ	protein
KaiC	PF06745.8	gi|479324551|ref|YP_007864599.1|	-	0.056	12.5	0.0	0.11	11.5	0.0	1.6	1	1	0	1	1	1	0	KaiC
Fer4_NifH	PF00142.13	gi|479324551|ref|YP_007864599.1|	-	0.12	11.5	0.0	0.29	10.2	0.0	1.7	1	0	0	1	1	1	0	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
CbiA	PF01656.18	gi|479324552|ref|YP_007864600.1|	-	4.1e-10	39.3	0.1	1.1e-09	37.9	0.0	1.7	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.1	gi|479324552|ref|YP_007864600.1|	-	4e-06	26.8	0.4	9.1e-06	25.6	0.3	1.7	1	1	0	1	1	1	1	AAA	domain
MipZ	PF09140.6	gi|479324552|ref|YP_007864600.1|	-	0.0045	16.1	0.0	0.0063	15.6	0.0	1.2	1	0	0	1	1	1	1	ATPase	MipZ
ArsA_ATPase	PF02374.10	gi|479324552|ref|YP_007864600.1|	-	0.005	15.9	0.1	0.039	12.9	0.0	2.2	2	1	0	2	2	2	1	Anion-transporting	ATPase
AAA_18	PF13238.1	gi|479324552|ref|YP_007864600.1|	-	0.0064	16.8	0.0	0.015	15.6	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
MobB	PF03205.9	gi|479324552|ref|YP_007864600.1|	-	0.036	13.7	0.2	0.081	12.6	0.1	1.6	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_17	PF13207.1	gi|479324552|ref|YP_007864600.1|	-	0.06	14.1	0.2	0.15	12.8	0.1	2.1	1	1	0	1	1	1	0	AAA	domain
AAA_26	PF13500.1	gi|479324552|ref|YP_007864600.1|	-	0.082	12.4	0.1	0.54	9.8	0.1	2.4	1	1	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.17	gi|479324552|ref|YP_007864600.1|	-	0.092	12.9	0.0	0.19	11.9	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
LpxK	PF02606.9	gi|479324552|ref|YP_007864600.1|	-	0.1	11.5	0.0	0.19	10.6	0.0	1.4	1	0	0	1	1	1	0	Tetraacyldisaccharide-1-P	4'-kinase
ADH_N	PF08240.7	gi|479324553|ref|YP_007864601.1|	-	7.5e-27	93.2	0.1	1.6e-26	92.1	0.1	1.6	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|479324553|ref|YP_007864601.1|	-	1.6e-23	82.6	0.1	3.1e-23	81.7	0.1	1.5	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|479324553|ref|YP_007864601.1|	-	8.8e-08	33.1	0.0	3e-07	31.3	0.0	1.8	2	0	0	2	2	2	1	Zinc-binding	dehydrogenase
AlaDh_PNT_C	PF01262.16	gi|479324553|ref|YP_007864601.1|	-	0.0023	17.4	0.1	0.0049	16.4	0.1	1.5	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
NAD_binding_10	PF13460.1	gi|479324553|ref|YP_007864601.1|	-	0.0043	17.0	0.2	0.007	16.3	0.1	1.4	1	1	0	1	1	1	1	NADH(P)-binding
DapB_N	PF01113.15	gi|479324553|ref|YP_007864601.1|	-	0.0091	15.9	1.3	0.17	11.8	0.9	2.3	1	1	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
Rhodanese	PF00581.15	gi|479324553|ref|YP_007864601.1|	-	0.022	15.1	0.1	15	5.9	0.0	3.1	3	0	0	3	3	3	0	Rhodanese-like	domain
zf-AD	PF07776.10	gi|479324553|ref|YP_007864601.1|	-	0.09	12.7	0.3	0.22	11.5	0.0	1.8	2	0	0	2	2	2	0	Zinc-finger	associated	domain	(zf-AD)
PHD_2	PF13831.1	gi|479324553|ref|YP_007864601.1|	-	0.31	10.3	0.1	0.31	10.3	0.1	1.6	2	0	0	2	2	2	0	PHD-finger
Cas_VVA1548	PF09652.5	gi|479324554|ref|YP_007864602.1|	-	0.06	13.3	0.0	0.091	12.7	0.0	1.3	1	0	0	1	1	1	0	Putative	CRISPR-associated	protein	(Cas_VVA1548)
MFS_1	PF07690.11	gi|479324557|ref|YP_007864605.1|	-	0.004	15.9	45.0	0.0058	15.3	30.1	2.0	1	1	0	1	1	1	1	Major	Facilitator	Superfamily
GspH	PF12019.3	gi|479324557|ref|YP_007864605.1|	-	0.01	15.9	0.2	0.017	15.2	0.1	1.2	1	0	0	1	1	1	0	Type	II	transport	protein	GspH
eRF1_2	PF03464.10	gi|479324558|ref|YP_007864606.1|	-	4.1e-41	140.4	0.0	8.2e-41	139.4	0.0	1.5	1	0	0	1	1	1	1	eRF1	domain	2
eRF1_3	PF03465.10	gi|479324558|ref|YP_007864606.1|	-	8.7e-22	77.5	4.1	1.6e-21	76.6	0.7	2.6	2	2	0	2	2	2	1	eRF1	domain	3
eRF1_1	PF03463.10	gi|479324558|ref|YP_007864606.1|	-	7e-16	57.9	0.0	2.1e-15	56.4	0.0	1.8	2	0	0	2	2	2	1	eRF1	domain	1
Ribosomal_L7Ae	PF01248.21	gi|479324558|ref|YP_007864606.1|	-	0.0022	17.4	0.1	0.0046	16.4	0.1	1.5	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
SpoU_sub_bind	PF08032.7	gi|479324558|ref|YP_007864606.1|	-	0.0091	16.1	0.1	0.029	14.5	0.1	1.9	1	0	0	1	1	1	1	RNA	2'-O	ribose	methyltransferase	substrate	binding
IGPS	PF00218.16	gi|479324558|ref|YP_007864606.1|	-	0.03	13.3	0.1	0.048	12.6	0.1	1.4	1	0	0	1	1	1	0	Indole-3-glycerol	phosphate	synthase
TroA	PF01297.12	gi|479324558|ref|YP_007864606.1|	-	0.095	11.9	0.1	0.16	11.1	0.1	1.2	1	0	0	1	1	1	0	Periplasmic	solute	binding	protein	family
Pribosyltran	PF00156.22	gi|479324559|ref|YP_007864607.1|	-	9.5e-22	77.0	1.1	1.4e-21	76.5	0.8	1.2	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.1	gi|479324559|ref|YP_007864607.1|	-	0.00032	19.9	0.0	0.00043	19.5	0.0	1.2	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
potato_inhibit	PF00280.13	gi|479324559|ref|YP_007864607.1|	-	0.078	13.1	0.2	0.23	11.6	0.0	1.8	2	0	0	2	2	2	0	Potato	inhibitor	I	family
PNP_UDP_1	PF01048.15	gi|479324560|ref|YP_007864608.1|	-	5.1e-49	166.3	0.0	5.7e-49	166.1	0.0	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
Adaptin_N	PF01602.15	gi|479324560|ref|YP_007864608.1|	-	0.079	11.2	0.0	0.1	10.9	0.0	1.1	1	0	0	1	1	1	0	Adaptin	N	terminal	region
polyprenyl_synt	PF00348.12	gi|479324562|ref|YP_007864610.1|	-	5.7e-28	97.4	0.5	7.4e-28	97.0	0.4	1.2	1	0	0	1	1	1	1	Polyprenyl	synthetase
RimK	PF08443.6	gi|479324563|ref|YP_007864611.1|	-	8.3e-38	129.7	0.0	1e-37	129.4	0.0	1.1	1	0	0	1	1	1	1	RimK-like	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|479324563|ref|YP_007864611.1|	-	9.5e-15	54.8	0.0	1.3e-14	54.4	0.0	1.1	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|479324563|ref|YP_007864611.1|	-	1.7e-12	46.7	0.0	1e-11	44.2	0.0	1.8	1	1	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
GSH-S_ATP	PF02955.11	gi|479324563|ref|YP_007864611.1|	-	3.8e-12	45.6	0.1	5.5e-12	45.1	0.1	1.2	1	0	0	1	1	1	1	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
ATP-grasp_3	PF02655.9	gi|479324563|ref|YP_007864611.1|	-	1.7e-07	31.2	0.1	4.9e-07	29.7	0.0	1.7	2	0	0	2	2	2	1	ATP-grasp	domain
Ins134_P3_kin	PF05770.6	gi|479324563|ref|YP_007864611.1|	-	0.00052	19.1	0.1	0.016	14.2	0.0	2.0	1	1	1	2	2	2	1	Inositol	1,	3,	4-trisphosphate	5/6-kinase
ATPgrasp_YheCD	PF14398.1	gi|479324563|ref|YP_007864611.1|	-	0.0013	17.6	0.0	0.0096	14.7	0.0	2.0	2	0	0	2	2	2	1	YheC/D	like	ATP-grasp
CPSase_L_D2	PF02786.12	gi|479324563|ref|YP_007864611.1|	-	0.0014	17.9	0.0	0.0029	16.9	0.0	1.4	1	1	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Synapsin_C	PF02750.9	gi|479324563|ref|YP_007864611.1|	-	0.0046	16.0	0.0	0.0056	15.7	0.0	1.1	1	0	0	1	1	1	1	Synapsin,	ATP	binding	domain
RIO1	PF01163.17	gi|479324563|ref|YP_007864611.1|	-	0.014	14.7	0.1	0.022	14.1	0.0	1.3	1	0	0	1	1	1	0	RIO1	family
AsnC_trans_reg	PF01037.16	gi|479324564|ref|YP_007864612.1|	-	2.6e-16	59.1	0.1	3.4e-16	58.7	0.1	1.2	1	0	0	1	1	1	1	AsnC	family
HTH_24	PF13412.1	gi|479324564|ref|YP_007864612.1|	-	0.0002	20.6	0.2	0.00057	19.2	0.1	1.9	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
NapD	PF03927.8	gi|479324564|ref|YP_007864612.1|	-	0.0012	18.6	0.0	0.0017	18.1	0.0	1.2	1	0	0	1	1	1	1	NapD	protein
ACT_4	PF13291.1	gi|479324564|ref|YP_007864612.1|	-	0.0033	17.7	0.1	0.054	13.8	0.0	2.3	2	1	0	2	2	2	1	ACT	domain
HTH_11	PF08279.7	gi|479324564|ref|YP_007864612.1|	-	0.0059	16.2	0.0	0.016	14.8	0.0	1.8	1	0	0	1	1	1	1	HTH	domain
Transcrip_reg	PF01709.15	gi|479324564|ref|YP_007864612.1|	-	0.07	12.2	0.2	0.19	10.8	0.1	1.6	1	1	1	2	2	2	0	Transcriptional	regulator
HTH_AsnC-type	PF13404.1	gi|479324564|ref|YP_007864612.1|	-	0.13	11.8	0.0	0.25	10.8	0.0	1.5	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
Pyr_redox_2	PF07992.9	gi|479324565|ref|YP_007864613.1|	-	3.3e-07	30.3	0.0	7.6e-07	29.2	0.0	1.6	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|479324565|ref|YP_007864613.1|	-	9.1e-06	25.6	0.0	1.9e-05	24.5	0.0	1.5	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_3	PF13738.1	gi|479324565|ref|YP_007864613.1|	-	3.1e-05	24.1	0.0	0.00058	19.9	0.0	2.1	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|479324565|ref|YP_007864613.1|	-	0.00019	20.4	0.0	0.0044	15.9	0.0	2.3	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
NAD_binding_9	PF13454.1	gi|479324565|ref|YP_007864613.1|	-	0.0018	18.0	0.0	0.23	11.2	0.0	2.3	2	0	0	2	2	2	1	FAD-NAD(P)-binding
Thi4	PF01946.12	gi|479324565|ref|YP_007864613.1|	-	0.0023	17.0	0.0	0.022	13.8	0.0	2.3	3	0	0	3	3	3	1	Thi4	family
HI0933_like	PF03486.9	gi|479324565|ref|YP_007864613.1|	-	0.003	16.1	0.0	0.027	12.9	0.0	2.0	2	0	0	2	2	2	1	HI0933-like	protein
FAD_binding_3	PF01494.14	gi|479324565|ref|YP_007864613.1|	-	0.004	16.2	0.0	0.0058	15.7	0.0	1.2	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox	PF00070.22	gi|479324565|ref|YP_007864613.1|	-	0.022	15.1	0.1	0.088	13.2	0.0	2.0	3	0	0	3	3	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
K_oxygenase	PF13434.1	gi|479324565|ref|YP_007864613.1|	-	0.087	11.7	0.0	0.27	10.1	0.0	1.7	2	0	0	2	2	2	0	L-lysine	6-monooxygenase	(NADPH-requiring)
Lycopene_cycl	PF05834.7	gi|479324565|ref|YP_007864613.1|	-	0.2	10.5	0.0	0.39	9.5	0.0	1.4	1	0	0	1	1	1	0	Lycopene	cyclase	protein
FAD_binding_2	PF00890.19	gi|479324565|ref|YP_007864613.1|	-	0.22	10.3	0.0	0.32	9.7	0.0	1.2	1	0	0	1	1	1	0	FAD	binding	domain
CRCB	PF02537.10	gi|479324566|ref|YP_007864614.1|	-	0.48	10.3	6.8	0.044	13.6	0.9	2.0	2	0	0	2	2	2	0	CrcB-like	protein
DUF2101	PF09874.4	gi|479324566|ref|YP_007864614.1|	-	3	7.2	21.4	0.28	10.6	6.4	2.1	1	1	1	2	2	2	0	Predicted	membrane	protein	(DUF2101)
DUF2644	PF10841.3	gi|479324566|ref|YP_007864614.1|	-	4.4	7.4	8.2	1.5	8.8	0.2	3.0	2	2	2	4	4	4	0	Protein	of	unknown	function	(DUF2644)
Asparaginase_2	PF01112.13	gi|479324567|ref|YP_007864615.1|	-	2.5e-52	177.6	6.2	1.5e-38	132.3	2.2	2.0	1	1	1	2	2	2	2	Asparaginase
Metallophos_2	PF12850.2	gi|479324568|ref|YP_007864616.1|	-	4.1e-11	42.9	0.0	4.9e-11	42.7	0.0	1.0	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
DUF98	PF01947.11	gi|479324569|ref|YP_007864617.1|	-	0.091	12.5	0.0	0.092	12.4	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF98)
DUF3755	PF12579.3	gi|479324569|ref|YP_007864617.1|	-	0.15	11.4	0.1	0.23	10.8	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3755)
EnY2	PF10163.4	gi|479324570|ref|YP_007864618.1|	-	0.12	12.2	1.4	6.7	6.7	0.4	2.6	2	1	0	2	2	2	0	Transcription	factor	e(y)2
rve	PF00665.21	gi|479324570|ref|YP_007864618.1|	-	0.14	12.2	0.0	0.22	11.6	0.0	1.3	1	0	0	1	1	1	0	Integrase	core	domain
DAO	PF01266.19	gi|479324571|ref|YP_007864619.1|	-	3.3e-11	42.7	0.0	1.6e-05	24.0	0.0	2.3	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|479324571|ref|YP_007864619.1|	-	1.2e-06	27.6	0.0	0.011	14.6	0.0	2.2	2	0	0	2	2	2	2	FAD	binding	domain
FAD_binding_3	PF01494.14	gi|479324571|ref|YP_007864619.1|	-	1.8e-06	27.2	0.0	0.084	11.9	0.1	2.9	2	1	0	2	2	2	2	FAD	binding	domain
Pyr_redox_2	PF07992.9	gi|479324571|ref|YP_007864619.1|	-	2.2e-06	27.6	0.0	6.4e-06	26.1	0.0	1.7	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.7	gi|479324571|ref|YP_007864619.1|	-	0.00046	19.2	0.1	0.0013	17.7	0.1	1.8	1	1	0	1	1	1	1	Lycopene	cyclase	protein
GIDA	PF01134.17	gi|479324571|ref|YP_007864619.1|	-	0.00053	18.9	0.0	0.019	13.8	0.0	2.1	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
NAD_binding_8	PF13450.1	gi|479324571|ref|YP_007864619.1|	-	0.003	17.5	0.0	0.0091	15.9	0.0	1.8	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
GDI	PF00996.13	gi|479324571|ref|YP_007864619.1|	-	0.0075	14.6	0.0	0.017	13.5	0.0	1.5	2	0	0	2	2	2	1	GDP	dissociation	inhibitor
Thi4	PF01946.12	gi|479324571|ref|YP_007864619.1|	-	0.011	14.8	0.1	0.037	13.1	0.1	2.0	1	1	0	1	1	1	0	Thi4	family
FAD_oxidored	PF12831.2	gi|479324571|ref|YP_007864619.1|	-	0.014	14.5	0.1	0.1	11.6	0.1	2.1	1	1	0	1	1	1	0	FAD	dependent	oxidoreductase
TrkA_N	PF02254.13	gi|479324571|ref|YP_007864619.1|	-	0.14	12.1	0.0	0.29	11.1	0.0	1.5	1	0	0	1	1	1	0	TrkA-N	domain
ApbA	PF02558.11	gi|479324571|ref|YP_007864619.1|	-	0.15	11.4	0.0	0.3	10.5	0.0	1.4	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
DUF2070	PF09843.4	gi|479324572|ref|YP_007864620.1|	-	2e-35	121.8	0.3	3.1e-35	121.2	0.2	1.2	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2070)
Phe_hydrox_dim	PF07976.7	gi|479324572|ref|YP_007864620.1|	-	0.15	11.6	0.0	0.36	10.4	0.0	1.6	1	0	0	1	1	1	0	Phenol	hydroxylase,	C-terminal	dimerisation	domain
Hydrolase_6	PF13344.1	gi|479324574|ref|YP_007864622.1|	-	3.3e-24	84.6	0.0	6.6e-24	83.7	0.0	1.5	2	0	0	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|479324574|ref|YP_007864622.1|	-	6.2e-17	61.0	0.0	1.8e-16	59.5	0.0	1.8	2	0	0	2	2	2	1	HAD-hyrolase-like
HAD_2	PF13419.1	gi|479324574|ref|YP_007864622.1|	-	3.8e-06	27.2	0.0	0.077	13.2	0.0	2.4	2	1	0	2	2	2	2	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|479324574|ref|YP_007864622.1|	-	0.00098	19.5	0.0	0.0078	16.6	0.0	2.0	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.7	gi|479324574|ref|YP_007864622.1|	-	0.0019	17.8	0.1	0.0037	16.8	0.0	1.6	2	0	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
YhfZ_C	PF14503.1	gi|479324574|ref|YP_007864622.1|	-	0.0038	16.5	0.0	0.0064	15.8	0.0	1.3	1	0	0	1	1	1	1	YhfZ	C-terminal	domain
PGP_phosphatase	PF09419.5	gi|479324574|ref|YP_007864622.1|	-	0.0061	15.9	0.2	0.064	12.6	0.0	2.2	2	0	0	2	2	2	1	Mitochondrial	PGP	phosphatase
FAD_binding_2	PF00890.19	gi|479324575|ref|YP_007864623.1|	-	1.6e-110	369.8	0.1	1.9e-110	369.5	0.1	1.1	1	0	0	1	1	1	1	FAD	binding	domain
Succ_DH_flav_C	PF02910.15	gi|479324575|ref|YP_007864623.1|	-	1.1e-43	148.1	0.0	1.7e-43	147.5	0.0	1.3	1	0	0	1	1	1	1	Fumarate	reductase	flavoprotein	C-term
DAO	PF01266.19	gi|479324575|ref|YP_007864623.1|	-	2e-09	36.8	0.1	1.7e-07	30.4	0.2	2.4	2	1	0	3	3	3	1	FAD	dependent	oxidoreductase
HI0933_like	PF03486.9	gi|479324575|ref|YP_007864623.1|	-	1e-05	24.1	0.3	0.00017	20.1	0.2	2.1	2	0	0	2	2	2	1	HI0933-like	protein
Pyr_redox_2	PF07992.9	gi|479324575|ref|YP_007864623.1|	-	1.4e-05	25.1	0.0	0.00012	21.9	0.0	2.2	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.12	gi|479324575|ref|YP_007864623.1|	-	4.2e-05	22.7	0.4	0.0018	17.4	0.1	2.6	3	0	0	3	3	3	1	Thi4	family
FAD_binding_3	PF01494.14	gi|479324575|ref|YP_007864623.1|	-	0.00014	21.0	0.2	0.00021	20.4	0.1	1.2	1	0	0	1	1	1	1	FAD	binding	domain
NAD_binding_8	PF13450.1	gi|479324575|ref|YP_007864623.1|	-	0.00036	20.5	0.4	0.0014	18.6	0.3	2.0	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
GIDA	PF01134.17	gi|479324575|ref|YP_007864623.1|	-	0.00052	18.9	4.4	0.0063	15.4	1.9	2.2	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
Lycopene_cycl	PF05834.7	gi|479324575|ref|YP_007864623.1|	-	0.028	13.3	0.1	0.043	12.7	0.1	1.2	1	0	0	1	1	1	0	Lycopene	cyclase	protein
Pyr_redox	PF00070.22	gi|479324575|ref|YP_007864623.1|	-	0.17	12.2	1.6	0.64	10.4	1.1	2.0	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_oxidored	PF12831.2	gi|479324575|ref|YP_007864623.1|	-	0.59	9.1	2.0	0.99	8.4	1.4	1.3	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
Fer2_3	PF13085.1	gi|479324576|ref|YP_007864624.1|	-	2.9e-33	113.9	0.0	5.7e-33	113.0	0.0	1.5	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_8	PF13183.1	gi|479324576|ref|YP_007864624.1|	-	1.7e-11	43.9	3.5	1.7e-11	43.9	2.5	2.0	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|479324576|ref|YP_007864624.1|	-	5.1e-10	39.4	2.5	5.1e-10	39.4	1.7	2.4	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|479324576|ref|YP_007864624.1|	-	5.4e-09	36.2	4.4	5.4e-09	36.2	3.1	2.2	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|479324576|ref|YP_007864624.1|	-	3.5e-08	33.1	3.8	3.5e-08	33.1	2.6	2.3	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|479324576|ref|YP_007864624.1|	-	8.4e-06	26.1	8.6	3.4e-05	24.1	1.8	2.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|479324576|ref|YP_007864624.1|	-	1e-05	25.1	16.3	0.00023	20.9	0.8	3.1	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|479324576|ref|YP_007864624.1|	-	2.3e-05	24.6	16.0	0.00075	19.7	6.1	2.9	2	1	2	4	4	4	3	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|479324576|ref|YP_007864624.1|	-	0.00028	20.3	20.0	0.0057	16.2	1.5	3.1	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|479324576|ref|YP_007864624.1|	-	0.0013	18.5	19.2	0.003	17.3	1.1	3.0	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|479324576|ref|YP_007864624.1|	-	0.0013	19.2	5.3	0.13	12.7	0.8	2.8	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_16	PF13484.1	gi|479324576|ref|YP_007864624.1|	-	0.0042	17.8	8.9	0.0042	17.8	6.2	2.8	2	1	1	3	3	3	2	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.1	gi|479324576|ref|YP_007864624.1|	-	0.005	16.6	10.6	0.049	13.4	0.2	2.7	3	0	0	3	3	2	2	4Fe-4S	dicluster	domain
Fer2	PF00111.22	gi|479324576|ref|YP_007864624.1|	-	0.029	14.1	0.4	0.029	14.1	0.3	2.1	2	1	0	2	2	2	0	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_13	PF13370.1	gi|479324576|ref|YP_007864624.1|	-	0.038	14.3	8.6	0.2	12.0	2.1	2.8	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_4	PF12800.2	gi|479324576|ref|YP_007864624.1|	-	0.045	14.0	17.9	0.084	13.2	0.7	3.1	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer2_4	PF13510.1	gi|479324576|ref|YP_007864624.1|	-	0.12	12.2	0.1	0.21	11.4	0.1	1.4	1	0	0	1	1	1	0	2Fe-2S	iron-sulfur	cluster	binding	domain
CCG	PF02754.11	gi|479324577|ref|YP_007864625.1|	-	5.2e-33	112.9	0.3	2.4e-18	65.9	0.1	2.2	2	0	0	2	2	2	2	Cysteine-rich	domain
VWA_2	PF13519.1	gi|479324579|ref|YP_007864627.1|	-	5.8e-09	36.2	0.0	1.3e-08	35.1	0.0	1.6	2	0	0	2	2	2	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.23	gi|479324579|ref|YP_007864627.1|	-	2.4e-07	30.6	0.6	8.2e-07	28.9	0.0	2.1	2	1	0	2	2	2	1	von	Willebrand	factor	type	A	domain
VWA_3	PF13768.1	gi|479324579|ref|YP_007864627.1|	-	8.4e-07	28.8	0.0	1.9e-06	27.6	0.0	1.6	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA_CoxE	PF05762.9	gi|479324579|ref|YP_007864627.1|	-	0.00012	21.3	0.0	0.00027	20.1	0.0	1.5	1	0	0	1	1	1	1	VWA	domain	containing	CoxE-like	protein
Baculo_p24	PF05073.7	gi|479324579|ref|YP_007864627.1|	-	0.069	12.7	3.8	0.14	11.7	2.6	1.4	1	0	0	1	1	1	0	Baculovirus	P24	capsid	protein
AAA_5	PF07728.9	gi|479324580|ref|YP_007864628.1|	-	2e-28	98.8	0.0	4.7e-28	97.6	0.0	1.7	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.1	gi|479324580|ref|YP_007864628.1|	-	3.3e-06	27.2	0.4	5.7e-05	23.1	0.0	2.6	2	1	1	3	3	3	1	AAA	ATPase	domain
AAA_3	PF07726.6	gi|479324580|ref|YP_007864628.1|	-	1.8e-05	24.3	0.0	2.8e-05	23.7	0.0	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Mg_chelatase	PF01078.16	gi|479324580|ref|YP_007864628.1|	-	5e-05	22.5	0.1	0.00044	19.4	0.0	2.1	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_22	PF13401.1	gi|479324580|ref|YP_007864628.1|	-	6.3e-05	23.1	0.4	0.00056	20.0	0.0	2.6	2	2	0	2	2	2	1	AAA	domain
AAA	PF00004.24	gi|479324580|ref|YP_007864628.1|	-	0.00011	22.3	0.3	0.00057	20.1	0.0	2.3	3	1	0	3	3	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sigma54_activat	PF00158.21	gi|479324580|ref|YP_007864628.1|	-	0.00049	19.6	0.0	0.0013	18.2	0.0	1.6	1	1	0	1	1	1	1	Sigma-54	interaction	domain
AAA_17	PF13207.1	gi|479324580|ref|YP_007864628.1|	-	0.0006	20.6	0.2	0.0058	17.4	0.1	2.5	1	1	0	1	1	1	1	AAA	domain
MCM	PF00493.18	gi|479324580|ref|YP_007864628.1|	-	0.0016	17.3	0.0	0.005	15.6	0.0	1.8	2	0	0	2	2	2	1	MCM2/3/5	family
Sigma54_activ_2	PF14532.1	gi|479324580|ref|YP_007864628.1|	-	0.041	13.9	1.1	0.86	9.6	0.1	3.2	3	2	0	3	3	3	0	Sigma-54	interaction	domain
AAA_19	PF13245.1	gi|479324580|ref|YP_007864628.1|	-	0.051	13.3	0.0	0.11	12.2	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_33	PF13671.1	gi|479324580|ref|YP_007864628.1|	-	0.11	12.4	0.0	0.34	10.7	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
AAA_18	PF13238.1	gi|479324580|ref|YP_007864628.1|	-	0.48	10.7	4.0	0.93	9.7	0.1	2.8	1	1	1	2	2	2	0	AAA	domain
tRNA_anti-codon	PF01336.20	gi|479324581|ref|YP_007864629.1|	-	7.7e-07	28.8	0.4	1e-06	28.4	0.3	1.2	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
PqqD	PF05402.7	gi|479324582|ref|YP_007864630.1|	-	2.4e-12	46.6	0.2	2.9e-12	46.4	0.2	1.2	1	0	0	1	1	1	1	Coenzyme	PQQ	synthesis	protein	D	(PqqD)
DUF4569	PF15133.1	gi|479324582|ref|YP_007864630.1|	-	0.013	14.8	0.1	0.019	14.3	0.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4569)
STN	PF07660.9	gi|479324582|ref|YP_007864630.1|	-	0.085	12.4	0.0	0.14	11.7	0.0	1.3	1	0	0	1	1	1	0	Secretin	and	TonB	N	terminus	short	domain
RNA_pol_A_CTD	PF03118.10	gi|479324582|ref|YP_007864630.1|	-	0.14	11.5	0.4	6.8	6.1	0.1	2.4	2	0	0	2	2	2	0	Bacterial	RNA	polymerase,	alpha	chain	C	terminal	domain
MoeA_N	PF03453.12	gi|479324583|ref|YP_007864631.1|	-	4.5e-45	152.9	0.0	7.5e-45	152.1	0.0	1.4	1	0	0	1	1	1	1	MoeA	N-terminal	region	(domain	I	and	II)
MoCF_biosynth	PF00994.19	gi|479324583|ref|YP_007864631.1|	-	1.1e-26	93.0	0.1	1.7e-26	92.3	0.0	1.3	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
MoeA_C	PF03454.10	gi|479324583|ref|YP_007864631.1|	-	2e-13	50.0	0.0	5.3e-13	48.7	0.0	1.7	1	0	0	1	1	1	1	MoeA	C-terminal	region	(domain	IV)
7TMR-HDED	PF07697.6	gi|479324583|ref|YP_007864631.1|	-	0.012	15.4	0.0	0.021	14.5	0.0	1.4	1	0	0	1	1	1	0	7TM-HD	extracellular
GHMP_kinases_N	PF00288.21	gi|479324586|ref|YP_007864634.1|	-	1.4e-18	66.7	1.0	2.7e-18	65.7	0.7	1.5	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|479324586|ref|YP_007864634.1|	-	9.5e-06	25.7	0.5	1.7e-05	24.9	0.0	1.7	2	0	0	2	2	2	1	GHMP	kinases	C	terminal
DUF725	PF05267.7	gi|479324586|ref|YP_007864634.1|	-	0.074	12.9	0.0	0.16	11.8	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF725)
Cys_Met_Meta_PP	PF01053.15	gi|479324587|ref|YP_007864635.1|	-	8e-127	422.7	0.1	9.3e-127	422.4	0.0	1.0	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Aminotran_1_2	PF00155.16	gi|479324587|ref|YP_007864635.1|	-	2.1e-07	30.2	0.0	4.6e-07	29.1	0.0	1.5	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.14	gi|479324587|ref|YP_007864635.1|	-	9.4e-06	24.5	0.0	1.9e-05	23.6	0.0	1.4	1	0	0	1	1	1	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.16	gi|479324587|ref|YP_007864635.1|	-	1.5e-05	24.3	0.0	7.3e-05	22.0	0.0	2.0	1	1	0	1	1	1	1	Beta-eliminating	lyase
GDC-P	PF02347.11	gi|479324587|ref|YP_007864635.1|	-	0.00049	18.9	0.0	0.00072	18.3	0.0	1.2	1	0	0	1	1	1	1	Glycine	cleavage	system	P-protein
Met_gamma_lyase	PF06838.6	gi|479324587|ref|YP_007864635.1|	-	0.0077	14.5	0.1	0.38	8.9	0.0	2.1	1	1	0	1	1	1	1	Methionine	gamma-lyase
Response_reg	PF00072.19	gi|479324587|ref|YP_007864635.1|	-	0.086	12.8	0.0	0.42	10.6	0.0	2.0	2	0	0	2	2	2	0	Response	regulator	receiver	domain
zf-C2H2_4	PF13894.1	gi|479324588|ref|YP_007864636.1|	-	0.042	14.1	0.3	0.08	13.3	0.2	1.5	1	0	0	1	1	1	0	C2H2-type	zinc	finger
zf-Di19	PF05605.7	gi|479324588|ref|YP_007864636.1|	-	0.077	13.1	0.0	0.12	12.5	0.0	1.3	1	0	0	1	1	1	0	Drought	induced	19	protein	(Di19),	zinc-binding
DUF1152	PF06626.7	gi|479324590|ref|YP_007864638.1|	-	2.3e-121	404.4	0.0	2.7e-121	404.2	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1152)
DUF3883	PF13020.1	gi|479324591|ref|YP_007864639.1|	-	0.019	14.6	0.2	0.036	13.8	0.1	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3883)
DUF3800	PF12686.2	gi|479324591|ref|YP_007864639.1|	-	0.022	14.3	0.3	0.026	14.1	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3800)
Hjc	PF01870.13	gi|479324591|ref|YP_007864639.1|	-	0.07	12.7	0.3	0.12	12.0	0.0	1.5	2	0	0	2	2	2	0	Archaeal	holliday	junction	resolvase	(hjc)
DUF4138	PF13595.1	gi|479324591|ref|YP_007864639.1|	-	0.083	11.8	0.3	0.31	9.9	0.0	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4138)
Cas_Cas4	PF01930.12	gi|479324591|ref|YP_007864639.1|	-	0.14	12.0	0.7	2.7	7.8	0.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF83
KH_1	PF00013.24	gi|479324592|ref|YP_007864640.1|	-	3.4e-06	26.5	6.4	4.4e-06	26.2	2.4	2.3	2	1	0	2	2	2	1	KH	domain
5_3_exonuc	PF01367.15	gi|479324592|ref|YP_007864640.1|	-	0.0082	16.3	1.3	0.016	15.4	0.2	2.0	2	1	0	2	2	2	1	5'-3'	exonuclease,	C-terminal	SAM	fold
Clr5	PF14420.1	gi|479324592|ref|YP_007864640.1|	-	0.094	12.6	0.0	0.16	11.8	0.0	1.4	1	0	0	1	1	1	0	Clr5	domain
KH_3	PF13014.1	gi|479324592|ref|YP_007864640.1|	-	3.1	7.5	12.9	0.05	13.2	2.3	2.7	3	0	0	3	3	3	0	KH	domain
RIO1	PF01163.17	gi|479324593|ref|YP_007864641.1|	-	4.2e-64	215.3	1.9	5.8e-64	214.9	1.3	1.2	1	0	0	1	1	1	1	RIO1	family
Kdo	PF06293.9	gi|479324593|ref|YP_007864641.1|	-	8.5e-08	31.5	0.2	2.1e-07	30.2	0.1	1.5	1	1	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
APH	PF01636.18	gi|479324593|ref|YP_007864641.1|	-	6.4e-06	26.0	0.0	2.1e-05	24.4	0.0	1.7	1	1	1	2	2	2	1	Phosphotransferase	enzyme	family
Pkinase_Tyr	PF07714.12	gi|479324593|ref|YP_007864641.1|	-	0.011	14.8	0.0	0.014	14.4	0.0	1.2	1	0	0	1	1	1	0	Protein	tyrosine	kinase
TaqI_C	PF12950.2	gi|479324593|ref|YP_007864641.1|	-	0.035	13.8	0.8	0.077	12.7	0.1	2.0	1	1	0	1	1	1	0	TaqI-like	C-terminal	specificity	domain
eIF-1a	PF01176.14	gi|479324594|ref|YP_007864642.1|	-	8.9e-18	63.4	0.3	1.1e-17	63.1	0.2	1.2	1	0	0	1	1	1	1	Translation	initiation	factor	1A	/	IF-1
Thiolase_N	PF00108.18	gi|479324595|ref|YP_007864643.1|	-	7.4e-86	287.3	0.6	1e-85	286.9	0.4	1.2	1	0	0	1	1	1	1	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.13	gi|479324595|ref|YP_007864643.1|	-	5.6e-36	122.6	0.0	1.1e-35	121.6	0.0	1.5	1	0	0	1	1	1	1	Thiolase,	C-terminal	domain
ketoacyl-synt	PF00109.21	gi|479324595|ref|YP_007864643.1|	-	2.4e-05	23.9	1.7	4.6e-05	23.0	1.1	1.5	1	1	0	1	1	1	1	Beta-ketoacyl	synthase,	N-terminal	domain
ACP_syn_III	PF08545.5	gi|479324595|ref|YP_007864643.1|	-	0.0003	20.3	0.5	0.013	15.1	0.2	2.4	2	0	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
SpoVAD	PF07451.6	gi|479324595|ref|YP_007864643.1|	-	0.016	13.7	0.0	0.047	12.1	0.0	1.7	2	0	0	2	2	2	0	Stage	V	sporulation	protein	AD	(SpoVAD)
Radical_SAM	PF04055.16	gi|479324596|ref|YP_007864644.1|	-	8.3e-25	87.8	0.0	1.7e-24	86.8	0.0	1.6	1	0	0	1	1	1	1	Radical	SAM	superfamily
UPF0004	PF00919.15	gi|479324596|ref|YP_007864644.1|	-	4.3e-24	84.1	0.1	7.9e-24	83.3	0.1	1.4	1	0	0	1	1	1	1	Uncharacterized	protein	family	UPF0004
TRAM	PF01938.15	gi|479324596|ref|YP_007864644.1|	-	4.7e-11	42.3	0.1	9.4e-11	41.3	0.1	1.6	1	0	0	1	1	1	1	TRAM	domain
eIF-5_eIF-2B	PF01873.12	gi|479324597|ref|YP_007864645.1|	-	8.9e-30	102.9	0.4	9.9e-30	102.7	0.3	1.0	1	0	0	1	1	1	1	Domain	found	in	IF2B/IF5
SUI1	PF01253.17	gi|479324597|ref|YP_007864645.1|	-	0.011	15.5	0.0	0.019	14.7	0.0	1.5	1	0	0	1	1	1	0	Translation	initiation	factor	SUI1
DUF2387	PF09526.5	gi|479324597|ref|YP_007864645.1|	-	0.014	15.3	0.2	0.023	14.6	0.2	1.3	1	0	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
Elf1	PF05129.8	gi|479324597|ref|YP_007864645.1|	-	0.042	13.5	0.6	0.076	12.7	0.4	1.4	1	0	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
Lar_restr_allev	PF14354.1	gi|479324597|ref|YP_007864645.1|	-	0.086	13.1	0.7	0.46	10.8	0.6	1.9	1	1	1	2	2	2	0	Restriction	alleviation	protein	Lar
Cys_rich_KTR	PF14205.1	gi|479324597|ref|YP_007864645.1|	-	0.1	12.0	6.0	0.45	10.0	0.1	3.0	2	1	0	3	3	3	0	Cysteine-rich	KTR
GATA	PF00320.22	gi|479324597|ref|YP_007864645.1|	-	0.16	11.3	0.8	0.3	10.4	0.6	1.4	1	0	0	1	1	1	0	GATA	zinc	finger
DUF424	PF04242.8	gi|479324598|ref|YP_007864646.1|	-	9e-28	96.1	0.8	9.9e-28	96.0	0.5	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF424)
MinC_N	PF05209.8	gi|479324598|ref|YP_007864646.1|	-	0.13	12.0	0.0	0.22	11.3	0.0	1.4	1	1	0	1	1	1	0	Septum	formation	inhibitor	MinC,	N-terminal	domain
NMD3	PF04981.8	gi|479324599|ref|YP_007864647.1|	-	6.4e-54	182.5	3.1	7.2e-54	182.3	2.1	1.0	1	0	0	1	1	1	1	NMD3	family
Nudix_N_2	PF14803.1	gi|479324599|ref|YP_007864647.1|	-	0.14	11.9	4.7	23	4.7	0.0	3.4	3	0	0	3	3	3	0	Nudix	N-terminal
DUF2602	PF10782.4	gi|479324599|ref|YP_007864647.1|	-	0.26	11.1	4.7	4.5	7.2	0.9	2.9	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2602)
Rpr2	PF04032.11	gi|479324599|ref|YP_007864647.1|	-	0.26	11.1	3.7	1.3	8.9	0.7	2.5	2	1	0	2	2	2	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
zf-C4pol	PF14260.1	gi|479324599|ref|YP_007864647.1|	-	0.46	10.5	3.3	16	5.5	0.0	2.5	2	1	0	2	2	2	0	C4-type	zinc-finger	of	DNA	polymerase	delta
DZR	PF12773.2	gi|479324599|ref|YP_007864647.1|	-	0.46	10.3	5.9	14	5.5	2.7	2.9	2	1	1	3	3	3	0	Double	zinc	ribbon
OrfB_Zn_ribbon	PF07282.6	gi|479324599|ref|YP_007864647.1|	-	1.7	8.3	4.6	0.46	10.1	0.2	2.2	2	1	1	3	3	3	0	Putative	transposase	DNA-binding	domain
RNase_HII	PF01351.13	gi|479324600|ref|YP_007864648.1|	-	3.8e-44	150.6	0.0	4.4e-44	150.5	0.0	1.0	1	0	0	1	1	1	1	Ribonuclease	HII
TGS	PF02824.16	gi|479324601|ref|YP_007864649.1|	-	2.3e-20	72.2	0.0	4.2e-20	71.3	0.0	1.5	1	0	0	1	1	1	1	TGS	domain
DUF2095	PF09868.4	gi|479324601|ref|YP_007864649.1|	-	0.054	13.2	0.1	0.16	11.7	0.1	1.7	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2095)
T2SF	PF00482.18	gi|479324602|ref|YP_007864650.1|	-	1.5e-12	47.4	2.8	2.1e-07	30.8	0.2	4.5	6	1	0	6	6	6	2	Type	II	secretion	system	(T2SS),	protein	F
T2SE	PF00437.15	gi|479324603|ref|YP_007864651.1|	-	1.5e-46	158.4	0.1	6.2e-46	156.4	0.0	1.9	1	1	1	2	2	2	1	Type	II/IV	secretion	system	protein
ABC_tran	PF00005.22	gi|479324603|ref|YP_007864651.1|	-	0.014	15.6	0.0	0.038	14.2	0.0	1.7	1	0	0	1	1	1	0	ABC	transporter
cobW	PF02492.14	gi|479324603|ref|YP_007864651.1|	-	0.019	14.4	0.1	0.036	13.5	0.0	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
MobB	PF03205.9	gi|479324603|ref|YP_007864651.1|	-	0.039	13.6	0.1	0.074	12.7	0.1	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
PCMT	PF01135.14	gi|479324603|ref|YP_007864651.1|	-	0.063	12.8	0.0	0.11	11.9	0.0	1.3	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
AAA_14	PF13173.1	gi|479324603|ref|YP_007864651.1|	-	0.068	13.0	1.0	1.6	8.6	0.0	3.1	3	0	0	3	3	3	0	AAA	domain
MMR_HSR1	PF01926.18	gi|479324603|ref|YP_007864651.1|	-	0.083	12.8	0.0	0.23	11.3	0.0	1.8	1	0	0	1	1	1	0	50S	ribosome-binding	GTPase
SRP54	PF00448.17	gi|479324603|ref|YP_007864651.1|	-	0.092	12.1	0.0	0.16	11.4	0.0	1.4	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA_29	PF13555.1	gi|479324603|ref|YP_007864651.1|	-	0.095	12.2	0.4	0.23	11.0	0.0	1.8	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
AAA_17	PF13207.1	gi|479324603|ref|YP_007864651.1|	-	0.1	13.4	0.0	0.9	10.3	0.0	2.5	2	0	0	2	2	2	0	AAA	domain
Zeta_toxin	PF06414.7	gi|479324603|ref|YP_007864651.1|	-	0.1	11.6	0.0	0.24	10.4	0.0	1.6	1	0	0	1	1	1	0	Zeta	toxin
Glyco_tranf_2_3	PF13641.1	gi|479324604|ref|YP_007864652.1|	-	6.3e-32	111.2	0.0	1e-31	110.5	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|479324604|ref|YP_007864652.1|	-	3.5e-25	88.8	0.1	3.5e-25	88.8	0.1	1.5	2	0	0	2	2	2	1	Glycosyl	transferase	family	group	2
Glycos_transf_2	PF00535.21	gi|479324604|ref|YP_007864652.1|	-	6.6e-19	68.2	1.0	9.6e-19	67.6	0.7	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.4	gi|479324604|ref|YP_007864652.1|	-	1.7e-15	56.8	0.3	3.3e-15	55.9	0.2	1.4	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_transf_21	PF13506.1	gi|479324604|ref|YP_007864652.1|	-	1.9e-15	56.5	0.2	5.5e-15	55.0	0.0	1.8	2	0	0	2	2	2	1	Glycosyl	transferase	family	21
Cellulose_synt	PF03552.9	gi|479324604|ref|YP_007864652.1|	-	0.00036	18.9	0.5	0.00069	18.0	0.4	1.4	1	0	0	1	1	1	1	Cellulose	synthase
DUF356	PF04009.7	gi|479324604|ref|YP_007864652.1|	-	0.01	15.8	0.1	0.021	14.8	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF356)
Pyrophosphatase	PF00719.14	gi|479324605|ref|YP_007864653.1|	-	1.4e-62	209.7	0.2	1.6e-62	209.5	0.2	1.0	1	0	0	1	1	1	1	Inorganic	pyrophosphatase
HD_3	PF13023.1	gi|479324606|ref|YP_007864654.1|	-	1.6e-14	53.9	0.0	4.5e-14	52.5	0.0	1.7	1	1	0	1	1	1	1	HD	domain
HD	PF01966.17	gi|479324606|ref|YP_007864654.1|	-	3e-05	24.0	0.3	0.00059	19.8	0.2	2.3	1	1	0	1	1	1	1	HD	domain
HDOD	PF08668.7	gi|479324606|ref|YP_007864654.1|	-	0.012	14.8	0.0	0.02	14.1	0.0	1.3	1	0	0	1	1	1	0	HDOD	domain
HD_2	PF12917.2	gi|479324606|ref|YP_007864654.1|	-	0.018	14.8	0.0	0.025	14.3	0.0	1.3	1	1	0	1	1	1	0	HD	containing	hydrolase-like	enzyme
Phos_pyr_kin	PF08543.7	gi|479324607|ref|YP_007864655.1|	-	6.1e-70	235.2	0.3	8.6e-70	234.7	0.2	1.2	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
Aldolase_2	PF10120.4	gi|479324607|ref|YP_007864655.1|	-	1.5e-58	196.8	0.1	2.7e-58	196.1	0.1	1.4	1	0	0	1	1	1	1	Putative	aldolase
PfkB	PF00294.19	gi|479324607|ref|YP_007864655.1|	-	8e-09	35.0	0.0	1.3e-08	34.3	0.0	1.2	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
MoaE	PF02391.12	gi|479324608|ref|YP_007864656.1|	-	2.4e-16	59.5	0.1	3.6e-16	59.0	0.0	1.3	1	0	0	1	1	1	1	MoaE	protein
ThiS	PF02597.15	gi|479324608|ref|YP_007864656.1|	-	8.3e-13	48.5	0.0	2e-12	47.3	0.0	1.7	1	0	0	1	1	1	1	ThiS	family
DUF2481	PF10654.4	gi|479324609|ref|YP_007864657.1|	-	0.066	12.8	0.7	0.14	11.8	0.5	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2481)
Fer4_8	PF13183.1	gi|479324610|ref|YP_007864658.1|	-	3.4e-09	36.5	4.5	6.5e-09	35.6	3.1	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|479324610|ref|YP_007864658.1|	-	8e-07	28.8	5.0	1.6e-06	27.8	3.4	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|479324610|ref|YP_007864658.1|	-	2.5e-06	27.8	4.2	0.0022	18.3	0.3	2.8	3	0	0	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|479324610|ref|YP_007864658.1|	-	4e-06	27.0	4.2	1.2e-05	25.5	2.9	1.9	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|479324610|ref|YP_007864658.1|	-	4.4e-06	26.9	6.1	8.3e-06	26.0	3.0	2.4	3	1	0	3	3	2	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|479324610|ref|YP_007864658.1|	-	2.7e-05	23.7	11.4	0.014	15.3	1.4	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|479324610|ref|YP_007864658.1|	-	6.2e-05	22.7	10.4	0.0027	17.4	8.1	2.4	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|479324610|ref|YP_007864658.1|	-	6.6e-05	23.0	10.1	0.0012	19.0	6.3	3.2	3	1	2	5	5	4	3	4Fe-4S	dicluster	domain
FAD_binding_4	PF01565.18	gi|479324610|ref|YP_007864658.1|	-	0.0001	21.7	0.0	0.00019	20.8	0.0	1.4	1	0	0	1	1	1	1	FAD	binding	domain
Fer4_4	PF12800.2	gi|479324610|ref|YP_007864658.1|	-	0.0012	18.9	12.3	0.019	15.2	0.9	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|479324610|ref|YP_007864658.1|	-	0.0014	19.3	2.8	0.28	11.9	0.1	2.7	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Fer4	PF00037.22	gi|479324610|ref|YP_007864658.1|	-	0.0017	17.9	17.4	0.0061	16.1	1.7	2.7	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_20	PF14691.1	gi|479324610|ref|YP_007864658.1|	-	0.026	14.1	6.1	0.14	11.7	0.1	2.9	3	0	0	3	3	3	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_3	PF12798.2	gi|479324610|ref|YP_007864658.1|	-	0.25	11.9	17.7	0.083	13.4	3.7	3.0	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|479324610|ref|YP_007864658.1|	-	2	8.4	14.5	0.25	11.2	0.9	2.9	3	0	0	3	3	2	0	4Fe-4S	binding	domain
GHMP_kinases_N	PF00288.21	gi|479324611|ref|YP_007864659.1|	-	2.3e-07	30.8	0.7	3.8e-07	30.0	0.5	1.4	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
DUF137	PF02006.11	gi|479324612|ref|YP_007864660.1|	-	1.3e-77	259.2	3.9	1.6e-77	258.9	2.7	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF137
TPP_enzyme_M	PF00205.17	gi|479324612|ref|YP_007864660.1|	-	0.11	12.2	0.5	4.9	6.9	0.1	2.7	3	0	0	3	3	3	0	Thiamine	pyrophosphate	enzyme,	central	domain
Pantoate_transf	PF02548.10	gi|479324613|ref|YP_007864661.1|	-	6.8e-108	359.7	0.0	7.8e-108	359.5	0.0	1.0	1	0	0	1	1	1	1	Ketopantoate	hydroxymethyltransferase
PEP_mutase	PF13714.1	gi|479324613|ref|YP_007864661.1|	-	6.5e-07	28.8	0.4	2e-05	23.9	0.2	2.6	1	1	2	3	3	3	2	Phosphoenolpyruvate	phosphomutase
N6-adenineMlase	PF10237.4	gi|479324613|ref|YP_007864661.1|	-	0.081	12.5	0.0	0.19	11.4	0.0	1.7	1	0	0	1	1	1	0	Probable	N6-adenine	methyltransferase
ABC_tran	PF00005.22	gi|479324615|ref|YP_007864663.1|	-	2.8e-25	89.2	0.0	4e-25	88.7	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|479324615|ref|YP_007864663.1|	-	1.2e-11	45.0	1.2	0.00013	22.0	0.3	2.1	1	1	1	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|479324615|ref|YP_007864663.1|	-	7.9e-05	21.8	1.6	0.17	10.8	0.8	2.2	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|479324615|ref|YP_007864663.1|	-	0.00012	22.4	2.8	0.00016	22.0	2.0	1.5	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|479324615|ref|YP_007864663.1|	-	0.0056	15.9	2.3	1.6	7.9	0.1	2.5	2	1	1	3	3	3	2	RecF/RecN/SMC	N	terminal	domain
AAA_10	PF12846.2	gi|479324615|ref|YP_007864663.1|	-	0.0064	15.9	0.8	2.2	7.6	0.0	2.1	1	1	0	2	2	2	2	AAA-like	domain
AAA_17	PF13207.1	gi|479324615|ref|YP_007864663.1|	-	0.014	16.1	0.5	0.037	14.8	0.2	1.6	1	1	0	1	1	1	0	AAA	domain
AAA_30	PF13604.1	gi|479324615|ref|YP_007864663.1|	-	0.018	14.6	0.0	0.03	13.9	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_29	PF13555.1	gi|479324615|ref|YP_007864663.1|	-	0.023	14.2	0.1	0.043	13.3	0.1	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
MobB	PF03205.9	gi|479324615|ref|YP_007864663.1|	-	0.035	13.8	0.1	0.076	12.7	0.1	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Rad17	PF03215.10	gi|479324615|ref|YP_007864663.1|	-	0.053	12.1	0.0	0.056	12.1	0.0	1.2	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
SRP54	PF00448.17	gi|479324615|ref|YP_007864663.1|	-	0.057	12.8	0.1	0.097	12.0	0.1	1.4	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
BCA_ABC_TP_C	PF12399.3	gi|479324615|ref|YP_007864663.1|	-	0.065	12.9	0.0	0.1	12.2	0.0	1.3	1	0	0	1	1	1	0	Branched-chain	amino	acid	ATP-binding	cassette	transporter
T2SE	PF00437.15	gi|479324615|ref|YP_007864663.1|	-	0.085	11.7	0.2	0.15	10.9	0.0	1.5	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
ArgK	PF03308.11	gi|479324615|ref|YP_007864663.1|	-	0.097	11.4	0.1	0.14	10.8	0.1	1.2	1	0	0	1	1	1	0	ArgK	protein
DUF258	PF03193.11	gi|479324615|ref|YP_007864663.1|	-	0.11	11.6	0.1	0.18	10.9	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_25	PF13481.1	gi|479324615|ref|YP_007864663.1|	-	0.13	11.6	0.0	1.3	8.3	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
AAA_22	PF13401.1	gi|479324615|ref|YP_007864663.1|	-	0.16	12.1	0.8	0.69	10.0	0.6	2.0	1	1	0	1	1	1	0	AAA	domain
ABC2_membrane_3	PF12698.2	gi|479324616|ref|YP_007864664.1|	-	3.9e-17	62.3	41.4	5.1e-17	61.9	28.7	1.1	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.2	gi|479324616|ref|YP_007864664.1|	-	1.8e-14	53.2	23.5	2.6e-14	52.7	16.3	1.3	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|479324616|ref|YP_007864664.1|	-	2e-06	27.1	45.8	4.5e-06	26.0	31.8	1.7	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
AsnC_trans_reg	PF01037.16	gi|479324617|ref|YP_007864665.1|	-	1.7e-11	43.6	0.8	2.1e-11	43.3	0.6	1.1	1	0	0	1	1	1	1	AsnC	family
GYD	PF08734.6	gi|479324617|ref|YP_007864665.1|	-	0.011	15.4	0.1	0.014	15.1	0.1	1.3	1	1	0	1	1	1	0	GYD	domain
Spt5-NGN	PF03439.8	gi|479324617|ref|YP_007864665.1|	-	0.035	13.8	0.8	0.22	11.2	0.6	1.9	1	1	0	1	1	1	0	Early	transcription	elongation	factor	of	RNA	pol	II,	NGN	section
AlkA_N	PF06029.6	gi|479324617|ref|YP_007864665.1|	-	0.065	13.2	0.0	0.072	13.1	0.0	1.1	1	0	0	1	1	1	0	AlkA	N-terminal	domain
ComJ	PF11033.3	gi|479324617|ref|YP_007864665.1|	-	0.1	12.2	0.2	1.3	8.6	0.0	1.9	1	1	1	2	2	2	0	Competence	protein	J	(ComJ)
ACT_4	PF13291.1	gi|479324617|ref|YP_007864665.1|	-	0.11	12.9	0.1	0.15	12.3	0.1	1.4	1	1	0	1	1	1	0	ACT	domain
ALMT	PF11744.3	gi|479324618|ref|YP_007864666.1|	-	0.059	12.0	0.4	0.07	11.7	0.3	1.0	1	0	0	1	1	1	0	Aluminium	activated	malate	transporter
V_ATPase_I	PF01496.14	gi|479324618|ref|YP_007864666.1|	-	0.83	7.4	5.3	0.87	7.3	3.7	1.0	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
IncA	PF04156.9	gi|479324618|ref|YP_007864666.1|	-	1.5	8.4	7.2	1.6	8.2	5.0	1.2	1	0	0	1	1	1	0	IncA	protein
RHH_1	PF01402.16	gi|479324619|ref|YP_007864667.1|	-	7.1e-11	41.5	0.4	1.2e-10	40.8	0.2	1.5	1	1	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
RHH_3	PF12651.2	gi|479324619|ref|YP_007864667.1|	-	0.00025	20.7	0.5	0.00039	20.0	0.2	1.4	1	1	0	1	1	1	1	Ribbon-helix-helix	domain
Lactamase_B_3	PF13483.1	gi|479324620|ref|YP_007864668.1|	-	2e-31	108.8	0.2	2.7e-31	108.4	0.1	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.2	gi|479324620|ref|YP_007864668.1|	-	2.9e-15	56.3	1.7	1.4e-12	47.6	1.2	2.1	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|479324620|ref|YP_007864668.1|	-	0.00067	19.3	5.3	0.01	15.4	3.2	2.2	2	0	0	2	2	2	1	Metallo-beta-lactamase	superfamily
HMGL-like	PF00682.14	gi|479324621|ref|YP_007864669.1|	-	7.2e-70	235.3	1.0	9.3e-70	234.9	0.7	1.1	1	0	0	1	1	1	1	HMGL-like
MAF_flag10	PF01973.13	gi|479324622|ref|YP_007864670.1|	-	1.5e-29	102.6	0.1	2e-29	102.2	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF115
TPK_catalytic	PF04263.11	gi|479324622|ref|YP_007864670.1|	-	0.0023	17.4	0.0	0.0051	16.3	0.0	1.6	2	0	0	2	2	2	1	Thiamin	pyrophosphokinase,	catalytic	domain
HEPN	PF05168.9	gi|479324624|ref|YP_007864672.1|	-	7.5e-05	22.6	1.3	0.00018	21.3	0.9	1.6	1	1	0	1	1	1	1	HEPN	domain
HGTP_anticodon	PF03129.15	gi|479324624|ref|YP_007864672.1|	-	0.084	12.8	0.3	0.15	11.9	0.1	1.7	2	0	0	2	2	2	0	Anticodon	binding	domain
DUF61	PF01886.11	gi|479324624|ref|YP_007864672.1|	-	0.089	12.6	3.4	0.72	9.6	1.0	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	DUF61
hGDE_central	PF14702.1	gi|479324626|ref|YP_007864674.1|	-	0.048	12.8	0.4	0.055	12.6	0.3	1.1	1	0	0	1	1	1	0	central	domain	of	human	glycogen	debranching	enzyme
PTPS	PF01242.14	gi|479324627|ref|YP_007864675.1|	-	1.4e-22	79.6	0.0	1.7e-22	79.3	0.0	1.0	1	0	0	1	1	1	1	6-pyruvoyl	tetrahydropterin	synthase
GPW_gp25	PF04965.9	gi|479324627|ref|YP_007864675.1|	-	0.13	11.7	0.0	0.2	11.2	0.0	1.4	1	0	0	1	1	1	0	Gene	25-like	lysozyme
DUF4346	PF14251.1	gi|479324629|ref|YP_007864677.1|	-	6.8e-05	22.5	0.0	0.00017	21.3	0.0	1.7	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4346)
Pyr_redox_2	PF07992.9	gi|479324630|ref|YP_007864678.1|	-	2.1e-31	109.4	1.6	2.7e-31	109.0	1.1	1.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|479324630|ref|YP_007864678.1|	-	7.2e-14	51.9	0.7	7.2e-14	51.9	0.5	2.5	3	0	0	3	3	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|479324630|ref|YP_007864678.1|	-	3.7e-13	50.0	0.0	8.4e-13	48.8	0.0	1.6	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
K_oxygenase	PF13434.1	gi|479324630|ref|YP_007864678.1|	-	7.5e-07	28.3	0.2	0.015	14.2	0.0	3.1	2	1	1	3	3	3	2	L-lysine	6-monooxygenase	(NADPH-requiring)
HI0933_like	PF03486.9	gi|479324630|ref|YP_007864678.1|	-	7.8e-05	21.3	1.8	0.051	12.0	0.0	3.1	3	0	0	3	3	3	2	HI0933-like	protein
FAD_oxidored	PF12831.2	gi|479324630|ref|YP_007864678.1|	-	0.0002	20.5	0.2	0.013	14.5	0.0	2.2	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Thi4	PF01946.12	gi|479324630|ref|YP_007864678.1|	-	0.00033	19.8	4.4	0.064	12.3	0.0	3.0	3	0	0	3	3	3	2	Thi4	family
FAD_binding_2	PF00890.19	gi|479324630|ref|YP_007864678.1|	-	0.00055	18.9	1.1	1.9	7.2	0.0	3.2	3	0	0	3	3	3	2	FAD	binding	domain
GIDA	PF01134.17	gi|479324630|ref|YP_007864678.1|	-	0.0017	17.2	7.2	0.79	8.5	0.0	4.0	3	2	1	4	4	4	2	Glucose	inhibited	division	protein	A
NAD_binding_7	PF13241.1	gi|479324630|ref|YP_007864678.1|	-	0.0059	16.8	1.2	0.25	11.6	0.2	2.3	2	0	0	2	2	2	1	Putative	NAD(P)-binding
DAO	PF01266.19	gi|479324630|ref|YP_007864678.1|	-	0.038	12.8	3.7	0.3	9.9	0.1	2.8	1	1	1	2	2	2	0	FAD	dependent	oxidoreductase
Lycopene_cycl	PF05834.7	gi|479324630|ref|YP_007864678.1|	-	0.11	11.3	0.3	14	4.5	0.1	2.9	2	1	1	3	3	3	0	Lycopene	cyclase	protein
Inositol_P	PF00459.20	gi|479324631|ref|YP_007864679.1|	-	2.1e-21	76.4	0.0	2.3e-21	76.2	0.0	1.1	1	0	0	1	1	1	1	Inositol	monophosphatase	family
FBPase	PF00316.15	gi|479324631|ref|YP_007864679.1|	-	0.00011	21.1	0.0	0.00016	20.6	0.0	1.2	1	0	0	1	1	1	1	Fructose-1-6-bisphosphatase
AAA	PF00004.24	gi|479324632|ref|YP_007864680.1|	-	1.5e-83	277.6	0.0	6.8e-41	139.5	0.0	2.5	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_2	PF07724.9	gi|479324632|ref|YP_007864680.1|	-	1.8e-15	57.3	0.0	3.3e-07	30.3	0.0	3.6	3	0	0	3	3	3	2	AAA	domain	(Cdc48	subfamily)
AAA_17	PF13207.1	gi|479324632|ref|YP_007864680.1|	-	2.7e-15	57.2	0.3	8.7e-07	29.7	0.1	3.4	2	2	0	2	2	2	2	AAA	domain
AAA_14	PF13173.1	gi|479324632|ref|YP_007864680.1|	-	1.1e-14	54.4	2.2	1.6e-07	31.2	0.0	3.3	4	0	0	4	4	2	2	AAA	domain
AAA_5	PF07728.9	gi|479324632|ref|YP_007864680.1|	-	3.2e-13	49.6	0.4	5.6e-05	22.8	0.0	4.2	2	2	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
AAA_22	PF13401.1	gi|479324632|ref|YP_007864680.1|	-	4.6e-13	49.4	1.5	0.0011	19.1	0.0	4.8	3	2	1	4	4	3	2	AAA	domain
RuvB_N	PF05496.7	gi|479324632|ref|YP_007864680.1|	-	2.7e-12	46.2	0.1	5.5e-06	25.5	0.1	2.8	2	1	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_16	PF13191.1	gi|479324632|ref|YP_007864680.1|	-	3.8e-10	40.0	0.0	0.00043	20.3	0.0	3.6	3	2	1	4	4	3	2	AAA	ATPase	domain
RNA_helicase	PF00910.17	gi|479324632|ref|YP_007864680.1|	-	1.8e-09	37.7	0.0	0.00036	20.6	0.0	3.1	2	1	0	2	2	2	2	RNA	helicase
AAA_18	PF13238.1	gi|479324632|ref|YP_007864680.1|	-	1.1e-08	35.4	0.1	0.00049	20.4	0.1	3.2	2	1	0	2	2	2	2	AAA	domain
Arch_ATPase	PF01637.13	gi|479324632|ref|YP_007864680.1|	-	4.8e-08	33.0	1.8	0.11	12.1	0.0	5.0	2	2	3	5	5	5	2	Archaeal	ATPase
AAA_25	PF13481.1	gi|479324632|ref|YP_007864680.1|	-	7e-08	32.1	1.7	0.14	11.5	0.1	3.4	2	1	1	3	3	3	3	AAA	domain
IstB_IS21	PF01695.12	gi|479324632|ref|YP_007864680.1|	-	9.6e-08	31.6	0.0	0.0061	15.9	0.0	2.5	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
AAA_33	PF13671.1	gi|479324632|ref|YP_007864680.1|	-	1.1e-07	31.7	0.0	0.023	14.6	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
Mg_chelatase	PF01078.16	gi|479324632|ref|YP_007864680.1|	-	1.3e-07	30.9	2.7	0.0027	16.8	0.1	2.4	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
Zeta_toxin	PF06414.7	gi|479324632|ref|YP_007864680.1|	-	1.4e-07	30.8	0.0	0.011	14.8	0.0	3.4	3	0	0	3	3	3	2	Zeta	toxin
AAA_28	PF13521.1	gi|479324632|ref|YP_007864680.1|	-	1.5e-07	31.5	0.0	0.012	15.5	0.0	2.8	3	0	0	3	3	2	2	AAA	domain
NACHT	PF05729.7	gi|479324632|ref|YP_007864680.1|	-	2e-07	30.8	0.2	0.085	12.5	0.0	3.8	2	2	2	4	4	4	2	NACHT	domain
DUF815	PF05673.8	gi|479324632|ref|YP_007864680.1|	-	5.6e-07	28.7	0.5	0.084	11.7	0.0	3.3	3	0	0	3	3	3	2	Protein	of	unknown	function	(DUF815)
TIP49	PF06068.8	gi|479324632|ref|YP_007864680.1|	-	1.4e-06	27.3	0.0	0.0045	15.7	0.0	2.6	2	0	0	2	2	2	2	TIP49	C-terminus
AAA_3	PF07726.6	gi|479324632|ref|YP_007864680.1|	-	2.7e-06	27.0	0.0	0.028	14.0	0.0	2.7	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
Rad17	PF03215.10	gi|479324632|ref|YP_007864680.1|	-	1.2e-05	24.1	0.1	0.096	11.3	0.0	2.6	2	1	0	2	2	2	2	Rad17	cell	cycle	checkpoint	protein
AAA_24	PF13479.1	gi|479324632|ref|YP_007864680.1|	-	2.4e-05	24.0	8.7	0.0013	18.3	0.3	3.6	5	0	0	5	5	3	2	AAA	domain
ABC_tran	PF00005.22	gi|479324632|ref|YP_007864680.1|	-	3.3e-05	24.2	0.1	0.17	12.1	0.0	2.9	2	1	0	2	2	2	2	ABC	transporter
Vps4_C	PF09336.5	gi|479324632|ref|YP_007864680.1|	-	3.6e-05	23.5	0.7	0.015	15.1	0.0	3.2	3	0	0	3	3	2	1	Vps4	C	terminal	oligomerisation	domain
Bac_DnaA	PF00308.13	gi|479324632|ref|YP_007864680.1|	-	6e-05	22.7	0.0	0.25	10.9	0.0	3.2	2	2	0	2	2	2	2	Bacterial	dnaA	protein
AFG1_ATPase	PF03969.11	gi|479324632|ref|YP_007864680.1|	-	6.7e-05	21.8	0.3	0.27	9.9	0.1	2.8	3	1	0	3	3	2	2	AFG1-like	ATPase
Sigma54_activ_2	PF14532.1	gi|479324632|ref|YP_007864680.1|	-	8.3e-05	22.6	0.0	0.2	11.6	0.0	3.0	2	0	0	2	2	2	1	Sigma-54	interaction	domain
KTI12	PF08433.5	gi|479324632|ref|YP_007864680.1|	-	9.1e-05	21.7	0.1	0.03	13.5	0.0	3.3	3	0	0	3	3	3	1	Chromatin	associated	protein	KTI12
AAA_19	PF13245.1	gi|479324632|ref|YP_007864680.1|	-	0.00014	21.5	0.0	0.33	10.7	0.0	2.7	2	0	0	2	2	2	1	Part	of	AAA	domain
Guanylate_kin	PF00625.16	gi|479324632|ref|YP_007864680.1|	-	0.0002	20.8	0.1	1.9	7.8	0.0	3.7	3	1	1	4	4	4	2	Guanylate	kinase
MMR_HSR1	PF01926.18	gi|479324632|ref|YP_007864680.1|	-	0.00023	21.0	0.5	0.39	10.6	0.0	4.1	4	1	1	5	5	3	1	50S	ribosome-binding	GTPase
UPF0079	PF02367.12	gi|479324632|ref|YP_007864680.1|	-	0.00025	20.6	0.1	0.31	10.6	0.0	2.6	2	0	0	2	2	2	1	Uncharacterised	P-loop	hydrolase	UPF0079
Sigma54_activat	PF00158.21	gi|479324632|ref|YP_007864680.1|	-	0.00055	19.4	0.0	1.9	7.9	0.0	3.2	3	1	0	3	3	2	2	Sigma-54	interaction	domain
Parvo_NS1	PF01057.12	gi|479324632|ref|YP_007864680.1|	-	0.00055	18.8	0.0	0.16	10.7	0.0	2.3	2	0	0	2	2	2	1	Parvovirus	non-structural	protein	NS1
AAA_30	PF13604.1	gi|479324632|ref|YP_007864680.1|	-	0.00066	19.3	0.2	1.1	8.8	0.0	2.7	2	1	0	2	2	2	2	AAA	domain
ATP-synt_ab	PF00006.20	gi|479324632|ref|YP_007864680.1|	-	0.00092	18.7	0.0	0.42	10.0	0.0	2.4	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
SKI	PF01202.17	gi|479324632|ref|YP_007864680.1|	-	0.001	18.9	0.0	0.32	10.8	0.0	2.8	2	0	0	2	2	2	1	Shikimate	kinase
ResIII	PF04851.10	gi|479324632|ref|YP_007864680.1|	-	0.0011	18.8	0.1	0.74	9.6	0.0	3.0	2	2	1	3	3	2	1	Type	III	restriction	enzyme,	res	subunit
NB-ARC	PF00931.17	gi|479324632|ref|YP_007864680.1|	-	0.0013	17.6	0.1	1.1	8.1	0.0	2.8	3	0	0	3	3	2	1	NB-ARC	domain
Viral_helicase1	PF01443.13	gi|479324632|ref|YP_007864680.1|	-	0.0015	18.0	0.0	0.071	12.6	0.0	2.5	2	0	0	2	2	2	1	Viral	(Superfamily	1)	RNA	helicase
AAA_11	PF13086.1	gi|479324632|ref|YP_007864680.1|	-	0.0026	17.3	0.0	1.3	8.5	0.0	2.6	2	1	0	2	2	2	1	AAA	domain
KaiC	PF06745.8	gi|479324632|ref|YP_007864680.1|	-	0.0029	16.7	0.6	2.6	7.0	0.0	3.1	3	1	0	3	3	3	0	KaiC
AAA_10	PF12846.2	gi|479324632|ref|YP_007864680.1|	-	0.0037	16.7	5.5	0.6	9.4	0.1	4.0	3	2	1	4	4	4	1	AAA-like	domain
AAA_29	PF13555.1	gi|479324632|ref|YP_007864680.1|	-	0.0062	16.0	0.0	2.7	7.5	0.0	2.6	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
KAP_NTPase	PF07693.9	gi|479324632|ref|YP_007864680.1|	-	0.009	15.0	0.2	2.5	7.0	0.0	3.2	3	1	1	4	4	4	0	KAP	family	P-loop	domain
NTPase_1	PF03266.10	gi|479324632|ref|YP_007864680.1|	-	0.011	15.5	0.0	0.66	9.6	0.0	2.6	2	0	0	2	2	2	0	NTPase
DUF258	PF03193.11	gi|479324632|ref|YP_007864680.1|	-	0.015	14.4	0.0	4.9	6.3	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF258
PhoH	PF02562.11	gi|479324632|ref|YP_007864680.1|	-	0.021	14.0	0.7	6.1	6.0	0.3	3.1	2	1	0	2	2	2	0	PhoH-like	protein
T2SE	PF00437.15	gi|479324632|ref|YP_007864680.1|	-	0.03	13.2	0.0	2.4	6.9	0.0	2.4	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
PPV_E1_C	PF00519.12	gi|479324632|ref|YP_007864680.1|	-	0.031	12.8	0.0	0.48	8.9	0.0	2.1	2	0	0	2	2	2	0	Papillomavirus	helicase
cobW	PF02492.14	gi|479324632|ref|YP_007864680.1|	-	0.038	13.4	0.3	3.9	6.8	0.0	2.7	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
TrwB_AAD_bind	PF10412.4	gi|479324632|ref|YP_007864680.1|	-	0.039	12.5	0.4	13	4.2	0.0	3.6	4	0	0	4	4	4	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
PduV-EutP	PF10662.4	gi|479324632|ref|YP_007864680.1|	-	0.04	13.4	0.1	2.1	7.8	0.0	2.5	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
IPT	PF01745.11	gi|479324632|ref|YP_007864680.1|	-	0.052	12.7	0.0	1.6	7.8	0.0	2.7	2	0	0	2	2	2	0	Isopentenyl	transferase
DAP3	PF10236.4	gi|479324632|ref|YP_007864680.1|	-	0.058	12.3	0.0	9.1	5.1	0.0	2.7	2	1	1	3	3	3	0	Mitochondrial	ribosomal	death-associated	protein	3
FtsK_SpoIIIE	PF01580.13	gi|479324632|ref|YP_007864680.1|	-	0.073	12.5	0.3	4.1	6.8	0.0	3.0	2	1	1	3	3	3	0	FtsK/SpoIIIE	family
DUF1677	PF07911.8	gi|479324632|ref|YP_007864680.1|	-	0.086	13.0	0.0	0.25	11.5	0.0	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1677)
Glutaredoxin	PF00462.19	gi|479324632|ref|YP_007864680.1|	-	0.096	12.6	0.1	1.6	8.8	0.0	2.9	4	0	0	4	4	2	0	Glutaredoxin
ATP_bind_1	PF03029.12	gi|479324632|ref|YP_007864680.1|	-	0.11	12.0	0.1	19	4.6	0.0	2.7	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
SRP54	PF00448.17	gi|479324632|ref|YP_007864680.1|	-	0.17	11.2	3.4	14	5.0	0.2	3.6	3	1	1	4	4	4	0	SRP54-type	protein,	GTPase	domain
DAO	PF01266.19	gi|479324633|ref|YP_007864681.1|	-	7.8e-20	71.0	0.1	5e-10	38.8	0.0	2.9	2	1	0	2	2	2	2	FAD	dependent	oxidoreductase
Amino_oxidase	PF01593.19	gi|479324633|ref|YP_007864681.1|	-	8.3e-12	44.9	0.6	5.7e-09	35.5	0.0	2.7	2	1	0	2	2	2	2	Flavin	containing	amine	oxidoreductase
NAD_binding_8	PF13450.1	gi|479324633|ref|YP_007864681.1|	-	2.8e-11	43.2	0.2	9.2e-11	41.6	0.1	1.9	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.19	gi|479324633|ref|YP_007864681.1|	-	1.7e-08	33.7	3.4	0.00034	19.5	1.7	2.8	3	0	0	3	3	3	2	FAD	binding	domain
Thi4	PF01946.12	gi|479324633|ref|YP_007864681.1|	-	1.4e-07	30.8	2.4	6.9e-07	28.6	0.6	2.3	2	0	0	2	2	2	1	Thi4	family
Pyr_redox	PF00070.22	gi|479324633|ref|YP_007864681.1|	-	9e-07	29.2	5.5	0.00028	21.2	0.4	3.3	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.9	gi|479324633|ref|YP_007864681.1|	-	1.2e-06	28.6	0.1	1e-05	25.4	0.0	2.2	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|479324633|ref|YP_007864681.1|	-	1.3e-05	23.8	3.7	0.0021	16.6	1.0	2.6	3	0	0	3	3	3	2	HI0933-like	protein
FAD_oxidored	PF12831.2	gi|479324633|ref|YP_007864681.1|	-	1.8e-05	24.0	0.3	0.00028	20.1	0.1	2.1	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
FAD_binding_3	PF01494.14	gi|479324633|ref|YP_007864681.1|	-	7e-05	22.0	0.6	0.00021	20.4	0.3	1.8	2	0	0	2	2	2	1	FAD	binding	domain
Trp_halogenase	PF04820.9	gi|479324633|ref|YP_007864681.1|	-	0.00051	18.8	1.8	0.043	12.4	0.5	2.3	2	0	0	2	2	2	2	Tryptophan	halogenase
Pyr_redox_3	PF13738.1	gi|479324633|ref|YP_007864681.1|	-	0.00078	19.5	0.2	0.008	16.2	0.1	2.1	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|479324633|ref|YP_007864681.1|	-	0.0014	17.5	13.7	0.0027	16.6	0.8	2.8	2	1	1	3	3	3	2	Glucose	inhibited	division	protein	A
GDI	PF00996.13	gi|479324633|ref|YP_007864681.1|	-	0.0016	16.8	0.1	0.082	11.2	0.0	2.2	2	0	0	2	2	2	1	GDP	dissociation	inhibitor
UDPG_MGDP_dh_N	PF03721.9	gi|479324633|ref|YP_007864681.1|	-	0.0062	15.9	0.2	0.013	14.9	0.1	1.5	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Lycopene_cycl	PF05834.7	gi|479324633|ref|YP_007864681.1|	-	0.021	13.7	1.1	0.38	9.6	0.3	2.5	2	0	0	2	2	2	0	Lycopene	cyclase	protein
NAD_binding_9	PF13454.1	gi|479324633|ref|YP_007864681.1|	-	0.031	14.0	0.0	0.067	12.9	0.0	1.7	1	0	0	1	1	1	0	FAD-NAD(P)-binding
NAD_Gly3P_dh_N	PF01210.18	gi|479324633|ref|YP_007864681.1|	-	0.13	12.0	0.2	0.27	10.9	0.2	1.5	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
3HCDH_N	PF02737.13	gi|479324633|ref|YP_007864681.1|	-	0.14	11.8	0.9	0.28	10.7	0.6	1.5	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Phosphodiest	PF01663.17	gi|479324635|ref|YP_007864683.1|	-	4.6e-17	62.3	1.7	5.1e-16	58.9	1.2	2.1	1	1	0	1	1	1	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
Metalloenzyme	PF01676.13	gi|479324635|ref|YP_007864683.1|	-	0.0013	18.1	0.0	0.0026	17.1	0.0	1.4	1	0	0	1	1	1	1	Metalloenzyme	superfamily
Pam17	PF08566.5	gi|479324635|ref|YP_007864683.1|	-	0.098	12.3	0.2	0.24	11.0	0.1	1.7	1	1	0	1	1	1	0	Mitochondrial	import	protein	Pam17
PglZ	PF08665.7	gi|479324635|ref|YP_007864683.1|	-	0.24	11.0	0.8	3.1	7.4	0.1	2.4	2	1	0	2	2	2	0	PglZ	domain
Pribosyltran	PF00156.22	gi|479324636|ref|YP_007864684.1|	-	3.6e-19	68.7	0.3	4.8e-19	68.3	0.2	1.1	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
PRTase_3	PF15610.1	gi|479324636|ref|YP_007864684.1|	-	0.072	11.9	0.0	0.093	11.6	0.0	1.2	1	0	0	1	1	1	0	PRTase	ComF-like
MM_CoA_mutase	PF01642.17	gi|479324637|ref|YP_007864685.1|	-	1.7e-195	650.1	0.0	1.9e-195	649.9	0.0	1.0	1	0	0	1	1	1	1	Methylmalonyl-CoA	mutase
RE_AccI	PF09545.5	gi|479324637|ref|YP_007864685.1|	-	0.031	12.8	0.0	0.052	12.0	0.0	1.3	1	0	0	1	1	1	0	AccI	restriction	endonuclease
Glyoxalase_4	PF13669.1	gi|479324638|ref|YP_007864686.1|	-	1.6e-25	89.1	0.0	2.1e-25	88.8	0.0	1.1	1	0	0	1	1	1	1	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase	PF00903.20	gi|479324638|ref|YP_007864686.1|	-	3.2e-13	49.7	0.0	3.7e-13	49.5	0.0	1.1	1	0	0	1	1	1	1	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase_3	PF13468.1	gi|479324638|ref|YP_007864686.1|	-	2.7e-10	40.4	0.0	3.7e-10	39.9	0.0	1.2	1	0	0	1	1	1	1	Glyoxalase-like	domain
Glyoxalase_2	PF12681.2	gi|479324638|ref|YP_007864686.1|	-	1.6e-09	38.3	0.0	1.9e-09	38.1	0.0	1.2	1	0	0	1	1	1	1	Glyoxalase-like	domain
Osmo_CC	PF08946.5	gi|479324638|ref|YP_007864686.1|	-	0.0002	21.3	1.5	0.35	10.9	0.0	2.5	2	0	0	2	2	2	2	Osmosensory	transporter	coiled	coil
DUF2202	PF09968.4	gi|479324638|ref|YP_007864686.1|	-	0.0062	16.2	0.0	0.03	13.9	0.0	2.0	1	1	0	2	2	2	1	Uncharacterized	protein	domain	(DUF2202)
CppA_N	PF14506.1	gi|479324638|ref|YP_007864686.1|	-	0.0087	15.7	0.1	0.053	13.2	0.1	2.0	1	1	0	1	1	1	1	CppA	N-terminal
Gp-FAR-1	PF05823.7	gi|479324638|ref|YP_007864686.1|	-	0.11	12.4	0.0	0.15	12.0	0.0	1.1	1	0	0	1	1	1	0	Nematode	fatty	acid	retinoid	binding	protein	(Gp-FAR-1)
HSP20	PF00011.16	gi|479324639|ref|YP_007864687.1|	-	8.7e-12	44.7	3.9	8.7e-12	44.7	2.7	2.5	2	1	0	2	2	2	1	Hsp20/alpha	crystallin	family
CS	PF04969.11	gi|479324639|ref|YP_007864687.1|	-	7.5e-08	32.8	2.1	1.1e-07	32.2	1.5	1.2	1	0	0	1	1	1	1	CS	domain
GvpH	PF05455.6	gi|479324639|ref|YP_007864687.1|	-	0.00092	18.8	0.0	0.0011	18.5	0.0	1.2	1	0	0	1	1	1	1	GvpH
PIH1	PF08190.7	gi|479324639|ref|YP_007864687.1|	-	0.0053	16.2	0.1	0.0069	15.8	0.0	1.1	1	0	0	1	1	1	1	pre-RNA	processing	PIH1/Nop17
zf-ZPR1	PF03367.8	gi|479324640|ref|YP_007864688.1|	-	1.7e-31	108.5	0.0	7.3e-30	103.2	0.0	2.0	1	1	0	1	1	1	1	ZPR1	zinc-finger	domain
Mob_synth_C	PF06463.8	gi|479324640|ref|YP_007864688.1|	-	0.0023	17.6	0.2	0.0045	16.6	0.0	1.6	2	0	0	2	2	2	1	Molybdenum	Cofactor	Synthesis	C
Lar_restr_allev	PF14354.1	gi|479324640|ref|YP_007864688.1|	-	0.0036	17.5	0.1	0.0062	16.8	0.1	1.4	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
Prim_Zn_Ribbon	PF08273.7	gi|479324640|ref|YP_007864688.1|	-	0.061	13.4	2.1	0.28	11.2	1.5	2.1	1	1	0	1	1	1	0	Zinc-binding	domain	of	primase-helicase
zf-DBF	PF07535.7	gi|479324640|ref|YP_007864688.1|	-	0.1	12.3	0.7	0.86	9.3	0.7	2.1	2	0	0	2	2	2	0	DBF	zinc	finger
DUF2225	PF09986.4	gi|479324640|ref|YP_007864688.1|	-	0.15	11.4	0.5	6.1	6.2	0.1	2.1	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2225)
Zn-ribbon_8	PF09723.5	gi|479324640|ref|YP_007864688.1|	-	0.17	11.8	3.9	5	7.1	0.0	2.5	3	0	0	3	3	3	0	Zinc	ribbon	domain
zf-C2H2_4	PF13894.1	gi|479324640|ref|YP_007864688.1|	-	1.1	9.7	4.5	13	6.4	0.1	2.6	3	0	0	3	3	3	0	C2H2-type	zinc	finger
TF_Zn_Ribbon	PF08271.7	gi|479324640|ref|YP_007864688.1|	-	2	7.7	6.6	3.9	6.8	2.3	2.6	2	1	0	2	2	2	0	TFIIB	zinc-binding
zf-H2C2_2	PF13465.1	gi|479324640|ref|YP_007864688.1|	-	4.6	7.7	7.2	11	6.5	0.0	2.9	3	0	0	3	3	3	0	Zinc-finger	double	domain
Cys_rich_KTR	PF14205.1	gi|479324640|ref|YP_007864688.1|	-	7.5	6.0	6.4	2.6	7.5	2.1	2.1	2	1	0	2	2	2	0	Cysteine-rich	KTR
GTP_EFTU	PF00009.22	gi|479324641|ref|YP_007864689.1|	-	3.6e-23	81.9	0.0	6.3e-23	81.1	0.0	1.3	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D3	PF03143.12	gi|479324641|ref|YP_007864689.1|	-	1.4e-15	57.2	0.1	2.1e-14	53.4	0.1	2.5	2	0	0	2	2	2	1	Elongation	factor	Tu	C-terminal	domain
GTP_EFTU_D2	PF03144.20	gi|479324641|ref|YP_007864689.1|	-	5.6e-09	35.9	3.9	9.3e-08	32.0	0.8	3.1	3	0	0	3	3	3	1	Elongation	factor	Tu	domain	2
PduV-EutP	PF10662.4	gi|479324641|ref|YP_007864689.1|	-	0.00097	18.6	0.1	3.5	7.0	0.0	3.4	2	1	1	3	3	3	2	Ethanolamine	utilisation	-	propanediol	utilisation
MMR_HSR1	PF01926.18	gi|479324641|ref|YP_007864689.1|	-	0.0047	16.8	2.3	0.0064	16.4	0.4	2.1	2	1	0	2	2	2	1	50S	ribosome-binding	GTPase
AAA_4	PF04326.9	gi|479324641|ref|YP_007864689.1|	-	0.045	13.9	0.1	0.045	13.9	0.0	3.0	5	0	0	5	5	5	0	Divergent	AAA	domain
COXG	PF06240.8	gi|479324642|ref|YP_007864690.1|	-	3.6e-18	65.5	0.2	4.3e-18	65.3	0.1	1.1	1	0	0	1	1	1	1	Carbon	monoxide	dehydrogenase	subunit	G	(CoxG)
DUF3211	PF11485.3	gi|479324642|ref|YP_007864690.1|	-	0.0018	18.3	0.1	0.0021	18.1	0.1	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF3211)
COXG	PF06240.8	gi|479324643|ref|YP_007864691.1|	-	3.1e-43	146.7	0.8	3.4e-43	146.6	0.6	1.0	1	0	0	1	1	1	1	Carbon	monoxide	dehydrogenase	subunit	G	(CoxG)
DUF3211	PF11485.3	gi|479324643|ref|YP_007864691.1|	-	0.0048	16.9	0.0	0.01	15.9	0.0	1.7	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF3211)
Polyketide_cyc2	PF10604.4	gi|479324643|ref|YP_007864691.1|	-	0.043	13.9	0.0	0.05	13.7	0.0	1.1	1	0	0	1	1	1	0	Polyketide	cyclase	/	dehydrase	and	lipid	transport
NTP_transf_3	PF12804.2	gi|479324644|ref|YP_007864692.1|	-	3.8e-34	118.0	0.0	4.4e-34	117.8	0.0	1.0	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.14	gi|479324644|ref|YP_007864692.1|	-	2.1e-08	33.9	0.0	3.1e-08	33.4	0.0	1.2	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
CofC	PF01983.11	gi|479324644|ref|YP_007864692.1|	-	0.014	14.3	0.2	0.021	13.7	0.2	1.4	1	1	0	1	1	1	0	Guanylyl	transferase	CofC	like
Fer2_2	PF01799.15	gi|479324645|ref|YP_007864693.1|	-	4.6e-37	125.7	0.5	1.6e-36	124.0	0.0	1.9	2	0	0	2	2	2	1	[2Fe-2S]	binding	domain
Fer2	PF00111.22	gi|479324645|ref|YP_007864693.1|	-	3.6e-07	29.8	0.7	3.6e-07	29.8	0.5	2.1	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer2_3	PF13085.1	gi|479324645|ref|YP_007864693.1|	-	0.00075	19.3	0.9	0.0017	18.1	0.6	1.7	1	1	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer2_4	PF13510.1	gi|479324645|ref|YP_007864693.1|	-	0.073	12.8	1.9	1.9	8.3	1.3	2.3	1	1	0	1	1	1	0	2Fe-2S	iron-sulfur	cluster	binding	domain
FAD_binding_5	PF00941.16	gi|479324646|ref|YP_007864694.1|	-	1e-36	125.9	0.0	1.5e-36	125.4	0.0	1.2	1	0	0	1	1	1	1	FAD	binding	domain	in	molybdopterin	dehydrogenase
CO_deh_flav_C	PF03450.12	gi|479324646|ref|YP_007864694.1|	-	2.4e-27	94.8	1.5	4e-27	94.1	1.1	1.3	1	0	0	1	1	1	1	CO	dehydrogenase	flavoprotein	C-terminal	domain
TP_methylase	PF00590.15	gi|479324647|ref|YP_007864695.1|	-	1.2e-46	159.1	0.1	1.4e-46	158.9	0.0	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
DUF1404	PF07185.6	gi|479324648|ref|YP_007864696.1|	-	7.8e-07	28.8	9.2	7.8e-07	28.8	6.3	1.6	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1404)
Sigma70_r1_1	PF03979.9	gi|479324649|ref|YP_007864697.1|	-	0.055	13.3	0.3	0.077	12.9	0.2	1.2	1	0	0	1	1	1	0	Sigma-70	factor,	region	1.1
SIS	PF01380.17	gi|479324650|ref|YP_007864698.1|	-	1.2e-12	47.5	0.3	9e-06	25.3	0.1	3.0	2	1	0	2	2	2	2	SIS	domain
Amidohydro_5	PF13594.1	gi|479324651|ref|YP_007864699.1|	-	4e-07	29.7	0.0	7.8e-07	28.8	0.0	1.5	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_1	PF01979.15	gi|479324651|ref|YP_007864699.1|	-	5.5e-06	26.2	0.0	0.0073	15.9	0.0	2.3	2	0	0	2	2	2	2	Amidohydrolase	family
Amidohydro_3	PF07969.6	gi|479324651|ref|YP_007864699.1|	-	0.00084	18.6	0.0	0.0025	17.1	0.0	1.7	2	0	0	2	2	2	1	Amidohydrolase	family
Met_10	PF02475.11	gi|479324652|ref|YP_007864700.1|	-	9.2e-47	159.2	0.0	1.1e-46	158.9	0.0	1.1	1	0	0	1	1	1	1	Met-10+	like-protein
PrmA	PF06325.8	gi|479324652|ref|YP_007864700.1|	-	0.013	14.6	0.0	0.019	14.1	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
Gln-synt_C	PF00120.19	gi|479324653|ref|YP_007864701.1|	-	3.6e-63	213.1	0.0	4.7e-63	212.7	0.0	1.1	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.14	gi|479324653|ref|YP_007864701.1|	-	0.0059	16.1	0.0	1.8	8.2	0.0	2.5	2	0	0	2	2	2	2	Glutamine	synthetase,	beta-Grasp	domain
ADH_N	PF08240.7	gi|479324654|ref|YP_007864702.1|	-	3.3e-30	104.0	1.2	6e-30	103.2	0.8	1.4	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|479324654|ref|YP_007864702.1|	-	2e-19	69.3	0.0	3.7e-19	68.5	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|479324654|ref|YP_007864702.1|	-	1.6e-11	45.2	0.0	3.3e-11	44.1	0.0	1.6	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
NAD_binding_7	PF13241.1	gi|479324654|ref|YP_007864702.1|	-	0.0012	19.0	0.0	0.0021	18.2	0.0	1.4	1	0	0	1	1	1	1	Putative	NAD(P)-binding
AlaDh_PNT_C	PF01262.16	gi|479324654|ref|YP_007864702.1|	-	0.005	16.4	0.1	0.008	15.7	0.1	1.3	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
Shikimate_DH	PF01488.15	gi|479324654|ref|YP_007864702.1|	-	0.011	15.8	0.1	0.019	15.0	0.1	1.4	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
Melittin	PF01372.12	gi|479324654|ref|YP_007864702.1|	-	0.028	13.7	0.2	0.07	12.5	0.1	1.7	1	0	0	1	1	1	0	Melittin
ApbA	PF02558.11	gi|479324654|ref|YP_007864702.1|	-	0.042	13.3	0.2	0.068	12.6	0.1	1.3	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
NAD_binding_10	PF13460.1	gi|479324654|ref|YP_007864702.1|	-	0.054	13.5	0.0	0.07	13.1	0.0	1.2	1	0	0	1	1	1	0	NADH(P)-binding
Pyr_redox_3	PF13738.1	gi|479324654|ref|YP_007864702.1|	-	0.075	13.0	0.0	0.11	12.5	0.0	1.2	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
ELFV_dehydrog	PF00208.16	gi|479324654|ref|YP_007864702.1|	-	0.092	12.3	0.4	0.13	11.7	0.3	1.2	1	0	0	1	1	1	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
Ribosomal_L13e	PF01294.13	gi|479324655|ref|YP_007864703.1|	-	1.3e-09	37.7	0.1	1.3e-09	37.7	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L13e
RTC	PF01137.16	gi|479324656|ref|YP_007864704.1|	-	1.7e-83	278.9	0.0	3.2e-83	278.0	0.0	1.4	1	1	0	1	1	1	1	RNA	3'-terminal	phosphate	cyclase
RTC_insert	PF05189.8	gi|479324656|ref|YP_007864704.1|	-	1.6e-25	89.1	0.6	2.9e-25	88.2	0.4	1.5	1	0	0	1	1	1	1	RNA	3'-terminal	phosphate	cyclase	(RTC),	insert	domain
IMS	PF00817.15	gi|479324658|ref|YP_007864706.1|	-	2.9e-45	153.7	0.5	6.8e-45	152.5	0.1	1.8	2	0	0	2	2	2	1	impB/mucB/samB	family
IMS_C	PF11799.3	gi|479324658|ref|YP_007864706.1|	-	9.6e-12	44.9	0.3	3.2e-11	43.2	0.1	1.9	3	0	0	3	3	3	1	impB/mucB/samB	family	C-terminal	domain
IMS_HHH	PF11798.3	gi|479324658|ref|YP_007864706.1|	-	1.7e-07	30.9	1.5	4.4e-07	29.5	0.2	2.3	2	0	0	2	2	2	1	IMS	family	HHH	motif
HHH_5	PF14520.1	gi|479324658|ref|YP_007864706.1|	-	0.0016	18.5	1.2	0.0052	16.9	0.8	1.9	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
Ribosomal_L18p	PF00861.17	gi|479324658|ref|YP_007864706.1|	-	0.0026	17.9	0.2	0.038	14.1	0.0	2.7	3	0	0	3	3	3	1	Ribosomal	L18p/L5e	family
HHH	PF00633.18	gi|479324658|ref|YP_007864706.1|	-	0.033	13.9	0.1	0.25	11.1	0.0	2.4	2	0	0	2	2	2	0	Helix-hairpin-helix	motif
Mt_ATP-synt_D	PF05873.7	gi|479324658|ref|YP_007864706.1|	-	0.09	12.4	2.0	0.51	9.9	0.0	2.3	1	1	1	2	2	2	0	ATP	synthase	D	chain,	mitochondrial	(ATP5H)
Spore_YhcN_YlaJ	PF09580.5	gi|479324658|ref|YP_007864706.1|	-	0.1	12.6	0.3	0.28	11.2	0.0	1.8	2	0	0	2	2	2	0	Sporulation	lipoprotein	YhcN/YlaJ	(Spore_YhcN_YlaJ)
Cdd1	PF11731.3	gi|479324658|ref|YP_007864706.1|	-	0.14	12.0	0.0	0.46	10.4	0.0	2.0	2	0	0	2	2	2	0	Pathogenicity	locus
PfkB	PF00294.19	gi|479324659|ref|YP_007864707.1|	-	9.4e-34	116.9	0.2	7.7e-33	113.8	0.1	2.0	1	1	0	1	1	1	1	pfkB	family	carbohydrate	kinase
TIP49	PF06068.8	gi|479324660|ref|YP_007864708.1|	-	1.4e-154	514.6	3.6	1.7e-154	514.3	2.5	1.0	1	0	0	1	1	1	1	TIP49	C-terminus
AAA	PF00004.24	gi|479324660|ref|YP_007864708.1|	-	4.2e-11	43.1	0.4	2.7e-08	34.0	0.0	2.7	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.7	gi|479324660|ref|YP_007864708.1|	-	2.1e-10	40.0	2.1	3e-07	29.7	0.1	3.2	2	1	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_22	PF13401.1	gi|479324660|ref|YP_007864708.1|	-	3.5e-08	33.6	1.1	0.0041	17.2	0.1	2.7	2	1	0	2	2	2	2	AAA	domain
AAA_16	PF13191.1	gi|479324660|ref|YP_007864708.1|	-	7e-07	29.4	1.7	4.2e-05	23.6	1.2	2.5	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_17	PF13207.1	gi|479324660|ref|YP_007864708.1|	-	1.9e-05	25.4	0.9	0.0008	20.2	0.0	2.8	1	1	1	3	3	3	1	AAA	domain
Mg_chelatase	PF01078.16	gi|479324660|ref|YP_007864708.1|	-	4.1e-05	22.8	0.5	0.00033	19.8	0.1	2.1	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
Sigma54_activat	PF00158.21	gi|479324660|ref|YP_007864708.1|	-	0.00011	21.7	0.2	0.0054	16.2	0.0	2.4	2	0	0	2	2	2	1	Sigma-54	interaction	domain
AAA_19	PF13245.1	gi|479324660|ref|YP_007864708.1|	-	0.00018	21.1	0.1	0.00052	19.7	0.1	1.8	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_25	PF13481.1	gi|479324660|ref|YP_007864708.1|	-	0.00019	20.8	0.1	0.00057	19.3	0.1	1.8	2	1	0	2	2	2	1	AAA	domain
DnaB_C	PF03796.10	gi|479324660|ref|YP_007864708.1|	-	0.00025	20.0	0.1	0.001	17.9	0.0	1.9	2	0	0	2	2	2	1	DnaB-like	helicase	C	terminal	domain
IstB_IS21	PF01695.12	gi|479324660|ref|YP_007864708.1|	-	0.00027	20.4	0.1	0.00077	18.9	0.1	1.7	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_18	PF13238.1	gi|479324660|ref|YP_007864708.1|	-	0.00028	21.2	0.2	0.0016	18.7	0.0	2.4	2	1	0	2	2	2	1	AAA	domain
ABC_tran	PF00005.22	gi|479324660|ref|YP_007864708.1|	-	0.00043	20.6	0.2	0.00083	19.6	0.1	1.5	1	0	0	1	1	1	1	ABC	transporter
AAA_33	PF13671.1	gi|479324660|ref|YP_007864708.1|	-	0.00056	19.8	0.0	0.0012	18.7	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_5	PF07728.9	gi|479324660|ref|YP_007864708.1|	-	0.00067	19.3	0.1	0.0038	16.9	0.0	2.2	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_2	PF07724.9	gi|479324660|ref|YP_007864708.1|	-	0.00089	19.2	0.1	0.0047	16.8	0.0	2.2	2	1	0	2	2	2	1	AAA	domain	(Cdc48	subfamily)
PhoH	PF02562.11	gi|479324660|ref|YP_007864708.1|	-	0.0073	15.5	0.1	0.015	14.5	0.1	1.5	1	0	0	1	1	1	1	PhoH-like	protein
Zeta_toxin	PF06414.7	gi|479324660|ref|YP_007864708.1|	-	0.0078	15.3	0.1	0.016	14.2	0.0	1.5	1	0	0	1	1	1	1	Zeta	toxin
PepSY	PF03413.14	gi|479324660|ref|YP_007864708.1|	-	0.0093	16.5	0.1	3.3	8.4	0.0	3.1	2	1	0	2	2	2	1	Peptidase	propeptide	and	YPEB	domain
RNA_helicase	PF00910.17	gi|479324660|ref|YP_007864708.1|	-	0.012	15.8	0.0	0.021	14.9	0.0	1.4	1	0	0	1	1	1	0	RNA	helicase
AAA_28	PF13521.1	gi|479324660|ref|YP_007864708.1|	-	0.02	14.8	0.2	0.054	13.4	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
NACHT	PF05729.7	gi|479324660|ref|YP_007864708.1|	-	0.024	14.2	0.0	0.055	13.1	0.0	1.7	1	0	0	1	1	1	0	NACHT	domain
DUF2075	PF09848.4	gi|479324660|ref|YP_007864708.1|	-	0.025	13.5	0.1	0.034	13.1	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
Parvo_NS1	PF01057.12	gi|479324660|ref|YP_007864708.1|	-	0.035	12.9	0.0	0.061	12.1	0.0	1.3	1	0	0	1	1	1	0	Parvovirus	non-structural	protein	NS1
AAA_11	PF13086.1	gi|479324660|ref|YP_007864708.1|	-	0.047	13.2	0.0	0.078	12.5	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_14	PF13173.1	gi|479324660|ref|YP_007864708.1|	-	0.072	12.9	0.1	1.4	8.8	0.0	2.6	2	0	0	2	2	2	0	AAA	domain
ResIII	PF04851.10	gi|479324660|ref|YP_007864708.1|	-	0.074	12.8	0.2	0.4	10.4	0.1	2.2	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
GATase	PF00117.23	gi|479324661|ref|YP_007864709.1|	-	4.3e-36	124.1	0.0	4.7e-36	124.0	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|479324661|ref|YP_007864709.1|	-	3.2e-12	46.3	0.0	2.7e-11	43.3	0.0	2.2	1	1	0	1	1	1	1	Peptidase	C26
SNO	PF01174.14	gi|479324661|ref|YP_007864709.1|	-	0.0021	17.6	0.0	0.06	12.9	0.0	2.1	1	1	0	1	1	1	1	SNO	glutamine	amidotransferase	family
HTS	PF04204.11	gi|479324661|ref|YP_007864709.1|	-	0.011	14.4	0.0	0.018	13.7	0.0	1.4	1	1	0	1	1	1	0	Homoserine	O-succinyltransferase
PI3K_C2	PF00792.19	gi|479324661|ref|YP_007864709.1|	-	0.15	11.8	0.0	0.21	11.3	0.0	1.3	1	0	0	1	1	1	0	Phosphoinositide	3-kinase	C2
KaiC	PF06745.8	gi|479324662|ref|YP_007864710.1|	-	9.8e-59	198.2	0.2	1.1e-58	197.9	0.1	1.0	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.1	gi|479324662|ref|YP_007864710.1|	-	7e-11	41.8	0.0	1e-10	41.3	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
RecA	PF00154.16	gi|479324662|ref|YP_007864710.1|	-	1.8e-06	27.2	0.0	4e-06	26.1	0.0	1.6	2	0	0	2	2	2	1	recA	bacterial	DNA	recombination	protein
GvpD	PF07088.6	gi|479324662|ref|YP_007864710.1|	-	1.8e-06	26.6	0.2	7.5e-06	24.5	0.1	2.1	1	1	1	2	2	2	1	GvpD	gas	vesicle	protein
AAA_14	PF13173.1	gi|479324662|ref|YP_007864710.1|	-	1.6e-05	24.7	0.2	0.003	17.4	0.0	2.3	1	1	1	2	2	2	1	AAA	domain
MEDS	PF14417.1	gi|479324662|ref|YP_007864710.1|	-	1.7e-05	23.9	0.0	2.6e-05	23.3	0.0	1.3	1	0	0	1	1	1	1	MEDS:	MEthanogen/methylotroph,	DcmR	Sensory	domain
AAA_19	PF13245.1	gi|479324662|ref|YP_007864710.1|	-	5.3e-05	22.8	0.0	0.0007	19.3	0.0	2.2	2	0	0	2	2	2	1	Part	of	AAA	domain
IstB_IS21	PF01695.12	gi|479324662|ref|YP_007864710.1|	-	5.4e-05	22.6	0.0	0.00032	20.1	0.0	1.9	1	1	1	2	2	2	1	IstB-like	ATP	binding	protein
Rad51	PF08423.6	gi|479324662|ref|YP_007864710.1|	-	0.00029	19.8	0.0	0.00048	19.1	0.0	1.5	1	1	0	1	1	1	1	Rad51
AAA_22	PF13401.1	gi|479324662|ref|YP_007864710.1|	-	0.0014	18.8	0.0	0.0031	17.6	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
DnaB_C	PF03796.10	gi|479324662|ref|YP_007864710.1|	-	0.0031	16.4	0.0	0.0053	15.6	0.0	1.4	1	0	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
RNA_helicase	PF00910.17	gi|479324662|ref|YP_007864710.1|	-	0.0098	16.0	0.0	0.019	15.1	0.0	1.5	1	0	0	1	1	1	1	RNA	helicase
PAXNEB	PF05625.6	gi|479324662|ref|YP_007864710.1|	-	0.028	13.2	0.1	0.066	12.0	0.0	1.6	2	0	0	2	2	2	0	PAXNEB	protein
Zot	PF05707.7	gi|479324662|ref|YP_007864710.1|	-	0.069	12.6	0.0	0.13	11.7	0.0	1.5	1	0	0	1	1	1	0	Zonular	occludens	toxin	(Zot)
NACHT	PF05729.7	gi|479324662|ref|YP_007864710.1|	-	0.082	12.5	0.1	0.25	10.9	0.0	1.8	1	1	0	1	1	1	0	NACHT	domain
AAA_28	PF13521.1	gi|479324662|ref|YP_007864710.1|	-	0.087	12.7	0.0	0.26	11.2	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
AAA_18	PF13238.1	gi|479324662|ref|YP_007864710.1|	-	0.11	12.7	3.5	0.16	12.2	0.5	2.5	2	1	0	2	2	2	0	AAA	domain
AAA	PF00004.24	gi|479324662|ref|YP_007864710.1|	-	0.11	12.6	0.1	0.28	11.4	0.1	1.8	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_17	PF13207.1	gi|479324662|ref|YP_007864710.1|	-	0.26	12.1	3.2	2.1	9.1	2.2	2.3	1	1	0	1	1	1	0	AAA	domain
Y_phosphatase	PF00102.22	gi|479324663|ref|YP_007864711.1|	-	1.1e-10	41.2	0.0	1.2e-10	41.1	0.0	1.1	1	0	0	1	1	1	1	Protein-tyrosine	phosphatase
DSPc	PF00782.15	gi|479324663|ref|YP_007864711.1|	-	4.1e-09	36.1	0.0	5.7e-09	35.6	0.0	1.3	1	0	0	1	1	1	1	Dual	specificity	phosphatase,	catalytic	domain
CDKN3	PF05706.7	gi|479324663|ref|YP_007864711.1|	-	4.1e-06	26.3	0.0	4.8e-06	26.1	0.0	1.1	1	0	0	1	1	1	1	Cyclin-dependent	kinase	inhibitor	3	(CDKN3)
PTPlike_phytase	PF14566.1	gi|479324663|ref|YP_007864711.1|	-	0.00034	20.6	0.0	0.00045	20.2	0.0	1.2	1	0	0	1	1	1	1	Inositol	hexakisphosphate
Y_phosphatase3	PF13350.1	gi|479324663|ref|YP_007864711.1|	-	0.0022	18.2	0.0	0.0042	17.3	0.0	1.4	1	1	0	1	1	1	1	Tyrosine	phosphatase	family
Endonuclease_5	PF04493.9	gi|479324664|ref|YP_007864712.1|	-	6.1e-42	143.3	0.0	7.3e-42	143.0	0.0	1.0	1	0	0	1	1	1	1	Endonuclease	V
Isochorismatase	PF00857.15	gi|479324665|ref|YP_007864713.1|	-	2.2e-40	138.4	0.0	2.5e-40	138.2	0.0	1.0	1	0	0	1	1	1	1	Isochorismatase	family
DHH	PF01368.15	gi|479324666|ref|YP_007864714.1|	-	5.5e-08	32.5	0.1	1.1e-07	31.6	0.0	1.4	1	0	0	1	1	1	1	DHH	family
DHHA1	PF02272.14	gi|479324666|ref|YP_007864714.1|	-	7.5e-08	31.9	0.2	2.3e-07	30.4	0.1	1.9	1	0	0	1	1	1	1	DHHA1	domain
Metallophos_2	PF12850.2	gi|479324667|ref|YP_007864715.1|	-	5.2e-08	32.8	0.0	7.5e-08	32.3	0.0	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|479324667|ref|YP_007864715.1|	-	3.1e-05	23.4	0.0	4.4e-05	22.9	0.0	1.4	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
YabP	PF07873.6	gi|479324667|ref|YP_007864715.1|	-	0.011	15.2	0.7	0.03	13.8	0.5	1.7	1	0	0	1	1	1	0	YabP	family
DUF763	PF05559.6	gi|479324668|ref|YP_007864716.1|	-	1.2e-129	431.9	0.0	1.4e-129	431.7	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF763)
PhoU_div	PF01865.11	gi|479324669|ref|YP_007864717.1|	-	7.1e-17	61.3	10.7	8.2e-17	61.0	7.4	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF47
PHO4	PF01384.15	gi|479324670|ref|YP_007864718.1|	-	7.3e-37	126.7	41.2	8.6e-37	126.4	26.3	2.0	1	1	0	1	1	1	1	Phosphate	transporter	family
RHH_1	PF01402.16	gi|479324671|ref|YP_007864719.1|	-	2.9e-06	26.9	0.0	4.3e-06	26.3	0.0	1.3	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
Cytokin-bind	PF09265.5	gi|479324671|ref|YP_007864719.1|	-	0.088	11.9	0.1	0.096	11.8	0.1	1.0	1	0	0	1	1	1	0	Cytokinin	dehydrogenase	1,	FAD	and	cytokinin	binding
DEAD	PF00270.24	gi|479324672|ref|YP_007864720.1|	-	2.3e-28	98.8	0.0	7.9e-27	93.8	0.0	2.8	3	1	0	3	3	3	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|479324672|ref|YP_007864720.1|	-	3.9e-12	45.8	0.0	7.7e-12	44.9	0.0	1.5	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|479324672|ref|YP_007864720.1|	-	1e-10	41.7	0.0	2.7e-10	40.3	0.0	1.7	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
SNF2_N	PF00176.18	gi|479324672|ref|YP_007864720.1|	-	3.5e-05	22.7	0.0	6.9e-05	21.7	0.0	1.4	1	0	0	1	1	1	1	SNF2	family	N-terminal	domain
DNA_pol_lambd_f	PF10391.4	gi|479324672|ref|YP_007864720.1|	-	0.0011	18.4	0.0	0.0065	15.9	0.0	2.4	1	0	0	1	1	1	1	Fingers	domain	of	DNA	polymerase	lambda
AAA_19	PF13245.1	gi|479324672|ref|YP_007864720.1|	-	0.0013	18.4	0.7	0.035	13.8	0.0	2.8	3	0	0	3	3	3	1	Part	of	AAA	domain
HHH_5	PF14520.1	gi|479324672|ref|YP_007864720.1|	-	0.0015	18.6	0.5	0.0067	16.5	0.0	2.3	2	0	0	2	2	2	1	Helix-hairpin-helix	domain
KaiC	PF06745.8	gi|479324672|ref|YP_007864720.1|	-	0.017	14.2	0.0	0.041	13.0	0.0	1.5	1	0	0	1	1	1	0	KaiC
Carboxyl_trans	PF01039.17	gi|479324673|ref|YP_007864721.1|	-	1.3e-189	630.6	0.8	1.5e-189	630.5	0.5	1.0	1	0	0	1	1	1	1	Carboxyl	transferase	domain
MdcE	PF06833.6	gi|479324673|ref|YP_007864721.1|	-	0.00057	19.1	0.2	0.0015	17.7	0.0	1.7	2	0	0	2	2	2	1	Malonate	decarboxylase	gamma	subunit	(MdcE)
Biotin_lipoyl	PF00364.17	gi|479324674|ref|YP_007864722.1|	-	3.5e-20	71.4	1.8	3e-19	68.4	2.4	1.7	2	0	0	2	2	2	1	Biotin-requiring	enzyme
Biotin_lipoyl_2	PF13533.1	gi|479324674|ref|YP_007864722.1|	-	2.4e-18	65.5	6.5	1.5e-08	34.1	1.9	2.5	1	1	1	2	2	2	2	Biotin-lipoyl	like
HlyD	PF00529.15	gi|479324674|ref|YP_007864722.1|	-	1.7e-13	50.5	3.3	6.4e-06	25.6	0.0	2.1	1	1	1	2	2	2	2	HlyD	family	secretion	protein
HlyD_2	PF12700.2	gi|479324674|ref|YP_007864722.1|	-	4.6e-09	35.8	2.6	0.00051	19.2	0.1	2.3	1	1	1	2	2	2	2	HlyD	family	secretion	protein
HlyD_3	PF13437.1	gi|479324674|ref|YP_007864722.1|	-	1.7e-07	31.4	0.8	0.017	15.4	0.0	3.1	3	0	0	3	3	3	2	HlyD	family	secretion	protein
NQRA	PF05896.6	gi|479324674|ref|YP_007864722.1|	-	0.00016	20.9	1.7	0.0005	19.3	1.2	1.8	1	1	0	1	1	1	1	Na(+)-translocating	NADH-quinone	reductase	subunit	A	(NQRA)
GCV_H	PF01597.14	gi|479324674|ref|YP_007864722.1|	-	0.00037	20.1	0.7	0.00089	18.9	0.3	1.9	2	0	0	2	2	2	1	Glycine	cleavage	H-protein
RnfC_N	PF13375.1	gi|479324674|ref|YP_007864722.1|	-	0.001	18.7	1.2	0.0029	17.2	0.8	1.8	1	1	0	1	1	1	1	RnfC	Barrel	sandwich	hybrid	domain
QRPTase_N	PF02749.11	gi|479324674|ref|YP_007864722.1|	-	0.0023	17.7	0.1	0.65	9.8	0.0	2.4	1	1	1	2	2	2	1	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
PYNP_C	PF07831.8	gi|479324674|ref|YP_007864722.1|	-	0.0051	16.2	1.9	0.28	10.6	0.0	2.5	2	0	0	2	2	2	1	Pyrimidine	nucleoside	phosphorylase	C-terminal	domain
Peptidase_M23	PF01551.17	gi|479324674|ref|YP_007864722.1|	-	0.0052	16.7	0.6	0.99	9.4	0.0	2.7	1	1	1	2	2	2	1	Peptidase	family	M23
PTS_EIIA_1	PF00358.15	gi|479324674|ref|YP_007864722.1|	-	0.0081	15.7	0.3	0.44	10.0	0.0	2.8	1	1	2	3	3	3	1	phosphoenolpyruvate-dependent	sugar	phosphotransferase	system,	EIIA	1
DUF2118	PF09891.4	gi|479324674|ref|YP_007864722.1|	-	0.1	12.3	1.1	0.56	9.8	0.5	2.2	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2118)
Apocytochr_F_C	PF01333.14	gi|479324674|ref|YP_007864722.1|	-	0.13	12.0	1.7	0.7	9.7	0.1	2.1	1	1	1	2	2	2	0	Apocytochrome	F,	C-terminal
CPSase_L_D2	PF02786.12	gi|479324675|ref|YP_007864723.1|	-	2e-66	223.3	0.0	2.8e-66	222.8	0.0	1.2	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
CPSase_L_chain	PF00289.17	gi|479324675|ref|YP_007864723.1|	-	1.2e-42	144.4	0.1	2.1e-42	143.7	0.0	1.4	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
Biotin_carb_C	PF02785.14	gi|479324675|ref|YP_007864723.1|	-	8.7e-35	118.9	0.0	1.5e-34	118.1	0.0	1.4	1	0	0	1	1	1	1	Biotin	carboxylase	C-terminal	domain
ATP-grasp_4	PF13535.1	gi|479324675|ref|YP_007864723.1|	-	2.8e-13	50.0	0.1	5.7e-13	49.0	0.0	1.5	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|479324675|ref|YP_007864723.1|	-	8e-12	44.5	0.0	1.2e-11	43.9	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
Dala_Dala_lig_C	PF07478.8	gi|479324675|ref|YP_007864723.1|	-	2.8e-07	30.1	0.0	8.4e-07	28.5	0.0	1.9	1	1	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
RimK	PF08443.6	gi|479324675|ref|YP_007864723.1|	-	9.4e-05	21.9	0.0	0.00019	20.9	0.0	1.5	1	0	0	1	1	1	1	RimK-like	ATP-grasp	domain
ATP-grasp_3	PF02655.9	gi|479324675|ref|YP_007864723.1|	-	0.00018	21.4	0.1	0.00028	20.7	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp	PF02222.17	gi|479324675|ref|YP_007864723.1|	-	0.00044	19.6	0.3	0.0011	18.4	0.0	1.7	2	0	0	2	2	2	1	ATP-grasp	domain
ATP-grasp_5	PF13549.1	gi|479324675|ref|YP_007864723.1|	-	0.077	12.1	0.0	0.15	11.2	0.0	1.4	1	0	0	1	1	1	0	ATP-grasp	domain
BPD_transp_1	PF00528.17	gi|479324676|ref|YP_007864724.1|	-	3.6e-17	62.4	44.7	1e-11	44.6	9.1	3.3	2	1	1	3	3	3	3	Binding-protein-dependent	transport	system	inner	membrane	component
SPW	PF03779.9	gi|479324676|ref|YP_007864724.1|	-	0.018	14.4	0.6	1.9	7.9	0.0	3.2	3	0	0	3	3	3	0	SPW	repeat
ABC_tran	PF00005.22	gi|479324677|ref|YP_007864725.1|	-	2.1e-28	99.3	0.0	3e-28	98.8	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|479324677|ref|YP_007864725.1|	-	3.1e-10	40.4	0.6	0.00016	21.7	0.0	2.2	1	1	0	2	2	2	2	AAA	domain
DUF258	PF03193.11	gi|479324677|ref|YP_007864725.1|	-	0.00022	20.4	0.0	0.00035	19.8	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_16	PF13191.1	gi|479324677|ref|YP_007864725.1|	-	0.00037	20.5	0.8	0.0017	18.3	0.5	2.1	1	1	0	1	1	1	1	AAA	ATPase	domain
SMC_N	PF02463.14	gi|479324677|ref|YP_007864725.1|	-	0.001	18.3	0.1	0.25	10.5	0.0	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_17	PF13207.1	gi|479324677|ref|YP_007864725.1|	-	0.0013	19.5	2.4	0.0054	17.5	0.7	2.6	1	1	1	2	2	2	1	AAA	domain
AAA_15	PF13175.1	gi|479324677|ref|YP_007864725.1|	-	0.0046	16.0	0.4	0.71	8.8	0.1	2.1	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA_22	PF13401.1	gi|479324677|ref|YP_007864725.1|	-	0.0054	16.8	0.1	0.012	15.7	0.1	1.9	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|479324677|ref|YP_007864725.1|	-	0.012	15.7	0.1	0.065	13.4	0.0	2.0	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_29	PF13555.1	gi|479324677|ref|YP_007864725.1|	-	0.014	14.9	0.0	0.03	13.8	0.0	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
ABC_ATPase	PF09818.4	gi|479324677|ref|YP_007864725.1|	-	0.015	13.8	0.1	2.2	6.7	0.0	2.5	2	1	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
AAA_23	PF13476.1	gi|479324677|ref|YP_007864725.1|	-	0.018	15.4	0.1	0.028	14.7	0.1	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_18	PF13238.1	gi|479324677|ref|YP_007864725.1|	-	0.038	14.3	0.1	0.07	13.4	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
MobB	PF03205.9	gi|479324677|ref|YP_007864725.1|	-	0.039	13.6	0.0	0.082	12.6	0.0	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NACHT	PF05729.7	gi|479324677|ref|YP_007864725.1|	-	0.045	13.3	0.1	0.11	12.1	0.1	1.6	1	0	0	1	1	1	0	NACHT	domain
AAA_10	PF12846.2	gi|479324677|ref|YP_007864725.1|	-	0.056	12.8	0.3	0.2	11.0	0.1	1.9	2	1	1	3	3	3	0	AAA-like	domain
NB-ARC	PF00931.17	gi|479324677|ref|YP_007864725.1|	-	0.058	12.2	0.0	0.1	11.4	0.0	1.3	1	0	0	1	1	1	0	NB-ARC	domain
AAA_33	PF13671.1	gi|479324677|ref|YP_007864725.1|	-	0.063	13.1	0.1	0.093	12.6	0.1	1.6	1	1	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.12	gi|479324677|ref|YP_007864725.1|	-	0.068	12.5	0.0	0.15	11.4	0.0	1.5	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
Arch_ATPase	PF01637.13	gi|479324677|ref|YP_007864725.1|	-	0.076	12.7	0.1	0.22	11.1	0.0	1.7	2	0	0	2	2	2	0	Archaeal	ATPase
AAA_25	PF13481.1	gi|479324677|ref|YP_007864725.1|	-	0.11	11.9	0.0	0.21	10.9	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
MMR_HSR1	PF01926.18	gi|479324677|ref|YP_007864725.1|	-	0.11	12.4	0.6	0.12	12.2	0.4	1.6	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
Aconitase_C	PF00694.14	gi|479324679|ref|YP_007864727.1|	-	5e-22	78.4	0.1	8.5e-22	77.6	0.0	1.4	1	1	0	1	1	1	1	Aconitase	C-terminal	domain
IlvN	PF07991.7	gi|479324679|ref|YP_007864727.1|	-	0.062	12.6	0.1	0.083	12.2	0.1	1.2	1	0	0	1	1	1	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
Aconitase_2_N	PF06434.8	gi|479324679|ref|YP_007864727.1|	-	0.1	11.9	1.6	2.6	7.4	1.1	2.1	1	1	0	1	1	1	0	Aconitate	hydratase	2	N-terminus
Aconitase	PF00330.15	gi|479324680|ref|YP_007864728.1|	-	1.1e-59	202.1	1.1	6e-37	127.1	0.1	2.6	1	1	1	2	2	2	2	Aconitase	family	(aconitate	hydratase)
DUF521	PF04412.8	gi|479324680|ref|YP_007864728.1|	-	0.017	13.7	0.0	0.031	12.8	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF521)
FAD_binding_7	PF03441.9	gi|479324681|ref|YP_007864729.1|	-	4.6e-78	262.2	0.7	6.5e-78	261.7	0.5	1.2	1	0	0	1	1	1	1	FAD	binding	domain	of	DNA	photolyase
DNA_photolyase	PF00875.13	gi|479324681|ref|YP_007864729.1|	-	7.6e-35	120.1	0.2	3.1e-34	118.1	0.0	1.9	2	0	0	2	2	2	1	DNA	photolyase
Glyco_hydro_15	PF00723.16	gi|479324682|ref|YP_007864730.1|	-	2.6e-28	98.7	0.0	4.1e-18	65.1	0.1	3.1	2	1	1	3	3	3	3	Glycosyl	hydrolases	family	15
DUF608	PF04685.8	gi|479324682|ref|YP_007864730.1|	-	1.5e-07	30.4	0.2	2.7e-07	29.6	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF608
TrmB	PF01978.14	gi|479324683|ref|YP_007864731.1|	-	1.2e-10	40.9	0.7	2.2e-10	40.0	0.5	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|479324683|ref|YP_007864731.1|	-	4.5e-08	32.3	4.1	7.4e-08	31.6	2.8	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|479324683|ref|YP_007864731.1|	-	1.7e-07	30.7	4.6	1.8e-07	30.7	1.8	2.0	2	1	0	2	2	2	1	HTH	domain
MarR	PF01047.17	gi|479324683|ref|YP_007864731.1|	-	7.4e-06	25.5	1.7	1.2e-05	24.9	0.6	1.7	2	0	0	2	2	2	1	MarR	family
MarR_2	PF12802.2	gi|479324683|ref|YP_007864731.1|	-	1.5e-05	24.6	0.0	2.1e-05	24.0	0.0	1.3	1	0	0	1	1	1	1	MarR	family
TFIIE_alpha	PF02002.12	gi|479324683|ref|YP_007864731.1|	-	6.6e-05	22.3	5.8	8.8e-05	21.9	4.0	1.1	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HTH_5	PF01022.15	gi|479324683|ref|YP_007864731.1|	-	0.00035	20.1	1.1	0.0006	19.4	0.4	1.6	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_Mga	PF08280.6	gi|479324683|ref|YP_007864731.1|	-	0.00037	20.1	4.1	0.00076	19.1	2.8	1.5	1	0	0	1	1	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
GerE	PF00196.14	gi|479324683|ref|YP_007864731.1|	-	0.00043	19.5	0.8	0.00076	18.7	0.2	1.7	2	0	0	2	2	1	1	Bacterial	regulatory	proteins,	luxR	family
HTH_Crp_2	PF13545.1	gi|479324683|ref|YP_007864731.1|	-	0.00047	19.8	0.1	0.00095	18.9	0.1	1.6	1	1	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_34	PF13601.1	gi|479324683|ref|YP_007864731.1|	-	0.0015	18.5	1.1	0.0029	17.5	0.7	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
Sigma70_r4	PF04545.11	gi|479324683|ref|YP_007864731.1|	-	0.0017	17.5	0.0	0.005	16.1	0.0	1.8	2	0	0	2	2	2	1	Sigma-70,	region	4
Rrf2	PF02082.15	gi|479324683|ref|YP_007864731.1|	-	0.0022	18.0	0.4	0.0048	16.9	0.3	1.6	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_27	PF13463.1	gi|479324683|ref|YP_007864731.1|	-	0.0032	17.7	0.1	0.0054	17.0	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
RuvB_C	PF05491.8	gi|479324683|ref|YP_007864731.1|	-	0.0036	16.8	0.4	0.0071	15.9	0.3	1.5	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	C-terminus
Sulfolobus_pRN	PF05584.6	gi|479324683|ref|YP_007864731.1|	-	0.0085	16.0	2.8	0.0092	15.9	0.9	1.9	1	1	1	2	2	2	1	Sulfolobus	plasmid	regulatory	protein
GntR	PF00392.16	gi|479324683|ref|YP_007864731.1|	-	0.009	15.4	0.0	0.016	14.6	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HTH_DeoR	PF08220.7	gi|479324683|ref|YP_007864731.1|	-	0.023	14.2	1.5	0.071	12.6	0.2	2.0	2	0	0	2	2	2	0	DeoR-like	helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|479324683|ref|YP_007864731.1|	-	0.041	13.8	0.8	0.075	12.9	0.2	1.7	2	0	0	2	2	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Hs1pro-1_C	PF07014.7	gi|479324683|ref|YP_007864731.1|	-	0.059	12.6	1.1	0.12	11.6	0.6	1.7	1	1	1	2	2	2	0	Hs1pro-1	protein	C-terminus
Penicillinase_R	PF03965.11	gi|479324683|ref|YP_007864731.1|	-	0.064	13.3	0.3	0.085	12.9	0.2	1.3	1	0	0	1	1	1	0	Penicillinase	repressor
DUF387	PF04079.11	gi|479324683|ref|YP_007864731.1|	-	0.074	12.4	1.1	0.12	11.6	0.7	1.5	1	1	0	1	1	1	0	Putative	transcriptional	regulators	(Ypuh-like)
HTH_3	PF01381.17	gi|479324683|ref|YP_007864731.1|	-	0.08	12.8	0.1	1.3	8.9	0.0	2.5	2	0	0	2	2	2	0	Helix-turn-helix
HTH_IclR	PF09339.5	gi|479324683|ref|YP_007864731.1|	-	0.1	12.2	0.0	0.17	11.5	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_12	PF08461.5	gi|479324683|ref|YP_007864731.1|	-	0.1	12.3	0.4	0.17	11.6	0.3	1.6	1	1	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
HTH_9	PF08221.6	gi|479324683|ref|YP_007864731.1|	-	0.22	11.4	0.8	0.38	10.6	0.5	1.4	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
SPAM	PF02090.10	gi|479324683|ref|YP_007864731.1|	-	0.33	10.9	2.9	0.4	10.6	1.6	1.3	1	1	0	1	1	1	0	Salmonella	surface	presentation	of	antigen	gene	type	M	protein
TFIIE_beta	PF02186.10	gi|479324683|ref|YP_007864731.1|	-	0.39	10.7	4.0	0.36	10.8	1.9	1.6	1	1	0	1	1	1	0	TFIIE	beta	subunit	core	domain
HTH_19	PF12844.2	gi|479324683|ref|YP_007864731.1|	-	0.43	10.6	2.7	3.2	7.8	1.9	2.3	1	1	0	1	1	1	0	Helix-turn-helix	domain
Mga	PF05043.8	gi|479324683|ref|YP_007864731.1|	-	0.51	10.6	3.1	0.3	11.3	0.6	1.7	2	0	0	2	2	2	0	Mga	helix-turn-helix	domain
HTH_45	PF14947.1	gi|479324684|ref|YP_007864732.1|	-	4.1e-29	100.2	2.7	5.1e-29	99.9	1.9	1.1	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_24	PF13412.1	gi|479324684|ref|YP_007864732.1|	-	0.011	15.1	0.3	0.019	14.3	0.2	1.5	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
DUF3116	PF11313.3	gi|479324684|ref|YP_007864732.1|	-	0.019	14.5	0.1	0.57	9.8	0.1	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3116)
CbiA	PF01656.18	gi|479324685|ref|YP_007864733.1|	-	1.9e-08	33.9	0.9	1.2e-07	31.3	0.6	2.0	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.1	gi|479324685|ref|YP_007864733.1|	-	0.00017	21.5	0.1	0.00037	20.4	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
ArsA_ATPase	PF02374.10	gi|479324685|ref|YP_007864733.1|	-	0.034	13.2	0.3	0.22	10.5	0.1	2.1	1	1	1	2	2	2	0	Anion-transporting	ATPase
MipZ	PF09140.6	gi|479324685|ref|YP_007864733.1|	-	0.053	12.5	0.0	0.085	11.9	0.0	1.4	1	1	0	1	1	1	0	ATPase	MipZ
DUF3311	PF11755.3	gi|479324686|ref|YP_007864734.1|	-	1.3e-17	63.0	5.5	1.4e-17	62.9	3.8	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3311)
DUF4233	PF14017.1	gi|479324686|ref|YP_007864734.1|	-	0.034	14.0	0.1	0.039	13.8	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4233)
PAGK	PF15284.1	gi|479324686|ref|YP_007864734.1|	-	1.3	8.8	4.5	5.9	6.7	0.3	2.1	2	0	0	2	2	2	0	Phage-encoded	virulence	factor
DUF2633	PF11119.3	gi|479324686|ref|YP_007864734.1|	-	3.8	7.3	4.7	0.55	9.9	0.3	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2633)
DUF2534	PF10749.4	gi|479324686|ref|YP_007864734.1|	-	7.7	6.5	6.2	4.4	7.2	1.2	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2534)
SSF	PF00474.12	gi|479324687|ref|YP_007864735.1|	-	1.5e-13	50.1	35.1	1.5e-13	50.1	24.3	1.9	2	0	0	2	2	2	1	Sodium:solute	symporter	family
SIR2	PF02146.12	gi|479324688|ref|YP_007864736.1|	-	1.8e-50	171.1	0.0	2.1e-50	170.8	0.0	1.1	1	0	0	1	1	1	1	Sir2	family
NTP_transferase	PF00483.18	gi|479324690|ref|YP_007864738.1|	-	1.4e-29	103.1	0.0	1.7e-29	102.8	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|479324690|ref|YP_007864738.1|	-	4e-09	36.7	0.0	5.4e-09	36.3	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.14	gi|479324690|ref|YP_007864738.1|	-	0.00036	20.1	0.0	0.00052	19.6	0.0	1.2	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
LIP	PF03583.9	gi|479324690|ref|YP_007864738.1|	-	0.14	11.3	0.0	0.19	10.9	0.0	1.1	1	0	0	1	1	1	0	Secretory	lipase
Toxin_54	PF15533.1	gi|479324691|ref|YP_007864739.1|	-	0.022	15.0	0.1	0.06	13.6	0.0	1.7	2	0	0	2	2	2	0	Putative	toxin	54
DUF3487	PF11990.3	gi|479324692|ref|YP_007864740.1|	-	0.0071	15.7	1.4	0.0081	15.5	1.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3487)
Wzy_C	PF04932.10	gi|479324692|ref|YP_007864740.1|	-	0.25	11.1	4.3	0.27	11.0	3.0	1.1	1	0	0	1	1	1	0	O-Antigen	ligase
Na_K-ATPase	PF00287.13	gi|479324692|ref|YP_007864740.1|	-	1	8.0	3.3	1.1	8.0	2.3	1.2	1	0	0	1	1	1	0	Sodium	/	potassium	ATPase	beta	chain
DUF3270	PF11674.3	gi|479324692|ref|YP_007864740.1|	-	2.8	8.0	6.2	3.9	7.5	4.3	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3270)
Pex24p	PF06398.6	gi|479324692|ref|YP_007864740.1|	-	3.1	6.4	7.0	3.3	6.4	4.9	1.1	1	0	0	1	1	1	0	Integral	peroxisomal	membrane	peroxin
CoA_binding	PF02629.14	gi|479324694|ref|YP_007864742.1|	-	1e-23	83.6	7.0	7e-23	80.9	0.7	2.5	2	1	0	2	2	2	2	CoA	binding	domain
Ligase_CoA	PF00549.14	gi|479324694|ref|YP_007864742.1|	-	5.4e-15	55.2	0.2	1.1e-14	54.3	0.1	1.5	1	0	0	1	1	1	1	CoA-ligase
Succ_CoA_lig	PF13607.1	gi|479324694|ref|YP_007864742.1|	-	7.1e-11	41.8	0.1	1.4e-10	40.9	0.0	1.5	2	0	0	2	2	2	1	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding_2	PF13380.1	gi|479324694|ref|YP_007864742.1|	-	2.7e-09	37.2	0.1	6.5e-09	35.9	0.1	1.7	2	0	0	2	2	2	1	CoA	binding	domain
ATP-grasp_2	PF08442.5	gi|479324695|ref|YP_007864743.1|	-	2.4e-30	105.4	0.8	5.6e-29	100.9	0.5	2.6	1	1	0	1	1	1	1	ATP-grasp	domain
Ligase_CoA	PF00549.14	gi|479324695|ref|YP_007864743.1|	-	4.8e-17	61.9	0.2	7.4e-17	61.3	0.1	1.3	1	0	0	1	1	1	1	CoA-ligase
ATP-grasp_5	PF13549.1	gi|479324695|ref|YP_007864743.1|	-	6.3e-07	28.8	0.0	0.0013	18.0	0.1	3.2	2	1	0	2	2	2	2	ATP-grasp	domain
DUF1887	PF09002.6	gi|479324695|ref|YP_007864743.1|	-	0.086	11.2	0.0	0.37	9.1	0.0	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1887)
HhH-GPD	PF00730.20	gi|479324696|ref|YP_007864744.1|	-	6e-09	36.1	0.0	8.6e-09	35.6	0.0	1.2	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
HHH	PF00633.18	gi|479324696|ref|YP_007864744.1|	-	0.00036	20.0	0.0	0.00099	18.6	0.0	1.8	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_5	PF14520.1	gi|479324696|ref|YP_007864744.1|	-	0.0017	18.4	0.4	0.0068	16.5	0.0	2.2	2	1	0	2	2	2	1	Helix-hairpin-helix	domain
HHH_2	PF12826.2	gi|479324696|ref|YP_007864744.1|	-	0.08	12.8	0.0	0.25	11.2	0.0	1.8	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
EndIII_4Fe-2S	PF10576.4	gi|479324696|ref|YP_007864744.1|	-	0.19	12.0	3.4	0.27	11.4	2.4	1.3	1	0	0	1	1	1	0	Iron-sulfur	binding	domain	of	endonuclease	III
Glyco_tran_28_C	PF04101.11	gi|479324697|ref|YP_007864745.1|	-	4.3e-09	36.2	0.0	1.2e-08	34.7	0.0	1.8	2	0	0	2	2	2	1	Glycosyltransferase	family	28	C-terminal	domain
Glyco_trans_1_3	PF13528.1	gi|479324697|ref|YP_007864745.1|	-	7.7e-08	31.8	0.0	1.5e-07	30.9	0.0	1.5	1	1	0	1	1	1	1	Glycosyl	transferase	family	1
tRNA-synt_2b	PF00587.20	gi|479324698|ref|YP_007864746.1|	-	4.3e-38	130.5	0.1	7.3e-38	129.8	0.1	1.3	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|479324698|ref|YP_007864746.1|	-	1.2e-19	69.9	1.1	1.2e-19	69.9	0.8	1.9	2	0	0	2	2	2	1	Anticodon	binding	domain
DNA_binding_1	PF01035.15	gi|479324699|ref|YP_007864747.1|	-	1.3e-27	95.3	0.0	1.6e-27	95.0	0.0	1.1	1	0	0	1	1	1	1	6-O-methylguanine	DNA	methyltransferase,	DNA	binding	domain
Sigma70_r4_2	PF08281.7	gi|479324699|ref|YP_007864747.1|	-	0.038	13.4	0.7	0.055	12.9	0.0	1.6	2	0	0	2	2	2	0	Sigma-70,	region	4
SoxE	PF06525.6	gi|479324700|ref|YP_007864748.1|	-	3.2e-89	297.4	33.4	2.5e-88	294.5	23.1	2.1	1	1	0	1	1	1	1	Sulfocyanin	(SoxE)
Shisa	PF13908.1	gi|479324700|ref|YP_007864748.1|	-	0.005	17.0	5.3	0.0077	16.4	3.7	1.4	1	0	0	1	1	1	1	Wnt	and	FGF	inhibitory	regulator
Mucin	PF01456.12	gi|479324700|ref|YP_007864748.1|	-	0.013	15.2	23.8	0.023	14.4	16.5	1.5	1	0	0	1	1	1	0	Mucin-like	glycoprotein
SpoIIIAH	PF12685.2	gi|479324700|ref|YP_007864748.1|	-	0.099	12.1	4.5	0.19	11.1	3.1	1.4	1	0	0	1	1	1	0	SpoIIIAH-like	protein
TarH	PF02203.10	gi|479324700|ref|YP_007864748.1|	-	0.72	9.6	2.6	1.1	9.0	1.8	1.3	1	0	0	1	1	1	0	Tar	ligand	binding	domain	homologue
DUF4307	PF14155.1	gi|479324700|ref|YP_007864748.1|	-	4.8	7.0	8.6	1.3e+02	2.3	6.3	2.5	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4307)
Fe-ADH	PF00465.14	gi|479324702|ref|YP_007864750.1|	-	1.7e-50	171.6	0.0	4.3e-50	170.3	0.0	1.5	1	1	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH_2	PF13685.1	gi|479324702|ref|YP_007864750.1|	-	4.1e-09	36.1	0.0	5.8e-09	35.6	0.0	1.1	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Herpes_U55	PF06501.6	gi|479324703|ref|YP_007864751.1|	-	0.013	14.1	0.4	0.016	13.8	0.3	1.0	1	0	0	1	1	1	0	Human	herpesvirus	U55	protein
NfI_DNAbd_pre-N	PF10524.4	gi|479324703|ref|YP_007864751.1|	-	0.098	12.2	0.0	0.18	11.3	0.0	1.4	1	0	0	1	1	1	0	Nuclear	factor	I	protein	pre-N-terminus
CbiA	PF01656.18	gi|479324704|ref|YP_007864752.1|	-	5.8e-09	35.6	0.0	6.2e-09	35.5	0.0	1.1	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.1	gi|479324704|ref|YP_007864752.1|	-	7.2e-07	29.2	0.2	1.3e-06	28.4	0.1	1.4	1	1	0	1	1	1	1	AAA	domain
ArsA_ATPase	PF02374.10	gi|479324704|ref|YP_007864752.1|	-	0.031	13.3	0.0	0.065	12.2	0.0	1.6	1	1	1	2	2	2	0	Anion-transporting	ATPase
Abhydrolase_3	PF07859.8	gi|479324705|ref|YP_007864753.1|	-	4.3e-69	232.2	0.0	5.9e-69	231.8	0.0	1.2	1	0	0	1	1	1	1	alpha/beta	hydrolase	fold
COesterase	PF00135.23	gi|479324705|ref|YP_007864753.1|	-	2.1e-08	33.3	1.8	8.1e-08	31.4	1.2	1.7	1	1	0	1	1	1	1	Carboxylesterase	family
DUF2424	PF10340.4	gi|479324705|ref|YP_007864753.1|	-	3.1e-06	26.0	0.0	4e-06	25.7	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2424)
Abhydrolase_5	PF12695.2	gi|479324705|ref|YP_007864753.1|	-	1.4e-05	24.8	0.0	2.4e-05	24.1	0.0	1.4	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Chlorophyllase2	PF12740.2	gi|479324705|ref|YP_007864753.1|	-	2e-05	23.6	0.0	3.2e-05	22.9	0.0	1.2	1	0	0	1	1	1	1	Chlorophyllase	enzyme
Chlorophyllase	PF07224.6	gi|479324705|ref|YP_007864753.1|	-	0.00038	19.3	0.0	0.0005	18.9	0.0	1.1	1	0	0	1	1	1	1	Chlorophyllase
Abhydrolase_6	PF12697.2	gi|479324705|ref|YP_007864753.1|	-	0.0012	18.7	0.0	0.0023	17.8	0.0	1.4	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
DUF2974	PF11187.3	gi|479324705|ref|YP_007864753.1|	-	0.047	13.0	0.0	0.062	12.6	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2974)
Esterase	PF00756.15	gi|479324705|ref|YP_007864753.1|	-	0.054	12.9	1.3	1.5	8.1	0.0	2.2	1	1	1	2	2	2	0	Putative	esterase
Peptidase_S9	PF00326.16	gi|479324705|ref|YP_007864753.1|	-	0.13	11.4	0.0	0.31	10.2	0.0	1.6	1	1	0	1	1	1	0	Prolyl	oligopeptidase	family
ADH_N	PF08240.7	gi|479324706|ref|YP_007864754.1|	-	6.5e-29	99.8	0.0	1.7e-28	98.5	0.0	1.7	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|479324706|ref|YP_007864754.1|	-	1.4e-19	69.9	0.2	2.2e-19	69.2	0.1	1.3	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|479324706|ref|YP_007864754.1|	-	7.5e-11	43.0	0.0	1.6e-10	41.9	0.0	1.5	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
Eno-Rase_NADH_b	PF12242.3	gi|479324706|ref|YP_007864754.1|	-	0.001	18.8	2.4	0.0025	17.5	1.7	1.7	1	0	0	1	1	1	1	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
AlaDh_PNT_C	PF01262.16	gi|479324706|ref|YP_007864754.1|	-	0.006	16.1	0.4	0.011	15.2	0.3	1.4	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
SIS_2	PF13580.1	gi|479324706|ref|YP_007864754.1|	-	0.0099	15.5	0.4	0.034	13.8	0.3	1.9	1	0	0	1	1	1	1	SIS	domain
THF_DHG_CYH_C	PF02882.14	gi|479324706|ref|YP_007864754.1|	-	0.013	14.5	0.5	0.025	13.6	0.3	1.4	1	0	0	1	1	1	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
ELFV_dehydrog	PF00208.16	gi|479324706|ref|YP_007864754.1|	-	0.029	13.9	2.7	0.048	13.2	1.9	1.3	1	0	0	1	1	1	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
AP_endonuc_2	PF01261.19	gi|479324706|ref|YP_007864754.1|	-	0.029	13.6	0.0	0.052	12.8	0.0	1.3	1	0	0	1	1	1	0	Xylose	isomerase-like	TIM	barrel
PTS_IIB	PF02302.12	gi|479324706|ref|YP_007864754.1|	-	0.059	13.8	0.3	0.18	12.3	0.2	1.8	1	0	0	1	1	1	0	PTS	system,	Lactose/Cellobiose	specific	IIB	subunit
E1-N	PF14463.1	gi|479324706|ref|YP_007864754.1|	-	0.076	12.6	0.2	0.17	11.4	0.1	1.6	1	0	0	1	1	1	0	E1	N-terminal	domain
Thiolase_N	PF00108.18	gi|479324707|ref|YP_007864755.1|	-	4.7e-69	232.2	0.0	6.3e-69	231.8	0.0	1.1	1	0	0	1	1	1	1	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.13	gi|479324707|ref|YP_007864755.1|	-	2.2e-46	156.2	0.7	2.5e-45	152.8	0.2	2.4	2	0	0	2	2	2	1	Thiolase,	C-terminal	domain
ketoacyl-synt	PF00109.21	gi|479324707|ref|YP_007864755.1|	-	5.5e-07	29.3	0.2	8.9e-06	25.3	0.0	2.9	4	0	0	4	4	4	1	Beta-ketoacyl	synthase,	N-terminal	domain
SpoVAD	PF07451.6	gi|479324707|ref|YP_007864755.1|	-	0.00061	18.3	0.0	0.0012	17.3	0.0	1.4	1	0	0	1	1	1	1	Stage	V	sporulation	protein	AD	(SpoVAD)
Acyl-CoA_dh_1	PF00441.19	gi|479324708|ref|YP_007864756.1|	-	1.4e-13	51.2	0.0	2.6e-13	50.3	0.0	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_2	PF08028.6	gi|479324708|ref|YP_007864756.1|	-	0.0026	17.9	0.0	0.0043	17.2	0.0	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Ribonuc_red_sm	PF00268.16	gi|479324709|ref|YP_007864757.1|	-	9.2e-14	51.1	0.0	1.5e-13	50.4	0.0	1.2	1	0	0	1	1	1	1	Ribonucleotide	reductase,	small	chain
Rubrerythrin	PF02915.12	gi|479324709|ref|YP_007864757.1|	-	0.00056	20.2	0.1	0.55	10.5	0.0	2.5	1	1	1	2	2	2	2	Rubrerythrin
DUF455	PF04305.9	gi|479324709|ref|YP_007864757.1|	-	0.0013	18.0	0.0	0.2	10.9	0.0	2.1	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF455)
E2F_TDP	PF02319.15	gi|479324709|ref|YP_007864757.1|	-	0.012	15.2	0.0	0.034	13.7	0.0	1.8	1	0	0	1	1	1	0	E2F/DP	family	winged-helix	DNA-binding	domain
adh_short	PF00106.20	gi|479324710|ref|YP_007864758.1|	-	7.7e-31	107.2	0.7	1e-30	106.8	0.5	1.2	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|479324710|ref|YP_007864758.1|	-	1.5e-27	96.8	0.4	1.9e-27	96.5	0.2	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|479324710|ref|YP_007864758.1|	-	1.9e-08	34.1	0.1	2.6e-08	33.7	0.1	1.1	1	0	0	1	1	1	1	KR	domain
POR	PF01558.13	gi|479324710|ref|YP_007864758.1|	-	0.008	16.1	1.2	0.51	10.2	0.0	2.2	1	1	1	2	2	2	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
THF_DHG_CYH_C	PF02882.14	gi|479324710|ref|YP_007864758.1|	-	0.09	11.8	0.4	0.28	10.2	0.1	1.9	2	0	0	2	2	2	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
Alba	PF01918.16	gi|479324710|ref|YP_007864758.1|	-	0.092	12.3	0.1	0.28	10.7	0.1	1.8	1	0	0	1	1	1	0	Alba
NmrA	PF05368.8	gi|479324710|ref|YP_007864758.1|	-	0.19	10.9	1.1	0.37	9.9	0.6	1.6	2	0	0	2	2	2	0	NmrA-like	family
ADH_N	PF08240.7	gi|479324711|ref|YP_007864759.1|	-	8.1e-32	109.2	0.2	1.3e-31	108.5	0.2	1.3	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|479324711|ref|YP_007864759.1|	-	1.6e-24	85.8	0.0	3.1e-24	84.9	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|479324711|ref|YP_007864759.1|	-	3.6e-05	24.6	0.0	7e-05	23.7	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
TrkA_N	PF02254.13	gi|479324711|ref|YP_007864759.1|	-	0.00025	21.0	0.4	0.00047	20.1	0.3	1.5	1	0	0	1	1	1	1	TrkA-N	domain
PALP	PF00291.20	gi|479324711|ref|YP_007864759.1|	-	0.00045	19.5	0.1	0.00066	19.0	0.1	1.2	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
AlaDh_PNT_C	PF01262.16	gi|479324711|ref|YP_007864759.1|	-	0.00081	18.9	0.1	0.00081	18.9	0.0	1.5	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
2-Hacid_dh_C	PF02826.14	gi|479324711|ref|YP_007864759.1|	-	0.0017	17.5	0.0	0.0028	16.8	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
ELFV_dehydrog	PF00208.16	gi|479324711|ref|YP_007864759.1|	-	0.0023	17.5	0.3	0.0041	16.7	0.2	1.4	1	0	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
Shikimate_DH	PF01488.15	gi|479324711|ref|YP_007864759.1|	-	0.0025	17.8	0.1	0.0046	17.0	0.1	1.4	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
ThiF	PF00899.16	gi|479324711|ref|YP_007864759.1|	-	0.0038	17.0	0.1	0.0038	17.0	0.0	1.7	2	0	0	2	2	1	1	ThiF	family
Spermine_synth	PF01564.12	gi|479324711|ref|YP_007864759.1|	-	0.0044	16.0	0.0	0.0062	15.4	0.0	1.2	1	0	0	1	1	1	1	Spermine/spermidine	synthase
Saccharop_dh	PF03435.13	gi|479324711|ref|YP_007864759.1|	-	0.0047	15.9	0.1	0.0077	15.2	0.1	1.4	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
XdhC_C	PF13478.1	gi|479324711|ref|YP_007864759.1|	-	0.045	14.0	0.0	0.074	13.3	0.0	1.3	1	0	0	1	1	1	0	XdhC	Rossmann	domain
Methyltransf_12	PF08242.7	gi|479324711|ref|YP_007864759.1|	-	0.096	13.1	0.0	0.21	12.0	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
3HCDH_N	PF02737.13	gi|479324711|ref|YP_007864759.1|	-	0.1	12.2	0.1	0.2	11.2	0.0	1.5	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
DUF3211	PF11485.3	gi|479324712|ref|YP_007864760.1|	-	1.4e-42	144.9	1.8	1.6e-42	144.7	1.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3211)
HpaB_N	PF11794.3	gi|479324713|ref|YP_007864761.1|	-	1.8e-74	250.4	1.7	2.6e-74	249.9	1.2	1.2	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
HpaB	PF03241.8	gi|479324713|ref|YP_007864761.1|	-	8.8e-47	158.5	0.1	1.3e-46	158.0	0.1	1.3	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	C	terminal
Sugar_tr	PF00083.19	gi|479324714|ref|YP_007864762.1|	-	9.7e-44	149.6	26.4	1.1e-43	149.4	18.3	1.0	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|479324714|ref|YP_007864762.1|	-	5.3e-33	114.1	52.1	1.4e-27	96.3	18.9	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
DUF1228	PF06779.9	gi|479324714|ref|YP_007864762.1|	-	0.00086	19.2	0.6	0.00086	19.2	0.4	3.2	3	1	0	3	3	3	2	Protein	of	unknown	function	(DUF1228)
TetR_N	PF00440.18	gi|479324715|ref|YP_007864763.1|	-	2.3e-14	52.7	0.1	4.7e-14	51.7	0.0	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	tetR	family
SCP2	PF02036.12	gi|479324716|ref|YP_007864764.1|	-	0.07	13.4	0.0	0.16	12.2	0.0	1.7	1	1	0	1	1	1	0	SCP-2	sterol	transfer	family
Thiolase_C	PF02803.13	gi|479324717|ref|YP_007864765.1|	-	7.7e-05	22.1	0.1	0.0077	15.6	0.0	2.4	2	0	0	2	2	2	2	Thiolase,	C-terminal	domain
DUF35	PF01796.12	gi|479324718|ref|YP_007864766.1|	-	1.9e-09	37.5	0.0	2.5e-09	37.2	0.0	1.2	1	0	0	1	1	1	1	DUF35	OB-fold	domain
DUF35_N	PF12172.3	gi|479324718|ref|YP_007864766.1|	-	1.4e-08	34.3	1.4	2.2e-08	33.7	1.0	1.2	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
TFIIS_C	PF01096.13	gi|479324718|ref|YP_007864766.1|	-	0.00037	20.0	1.6	0.061	12.9	0.2	2.3	2	0	0	2	2	2	1	Transcription	factor	S-II	(TFIIS)
TF_Zn_Ribbon	PF08271.7	gi|479324718|ref|YP_007864766.1|	-	0.00083	18.6	1.3	0.31	10.3	0.0	2.4	2	0	0	2	2	2	2	TFIIB	zinc-binding
HypA	PF01155.14	gi|479324718|ref|YP_007864766.1|	-	0.0019	17.8	0.1	0.0028	17.2	0.1	1.3	1	0	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
DNA_RNApol_7kD	PF03604.8	gi|479324718|ref|YP_007864766.1|	-	0.0031	16.9	1.8	0.013	14.9	0.1	2.3	2	0	0	2	2	2	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
DZR	PF12773.2	gi|479324718|ref|YP_007864766.1|	-	0.0037	17.0	1.3	0.0057	16.4	0.9	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
FdhE	PF04216.7	gi|479324718|ref|YP_007864766.1|	-	0.0039	16.9	0.1	0.0052	16.5	0.1	1.2	1	0	0	1	1	1	1	Protein	involved	in	formate	dehydrogenase	formation
zf-ribbon_3	PF13248.1	gi|479324718|ref|YP_007864766.1|	-	0.0048	16.0	6.9	0.01	14.9	4.8	1.6	1	1	0	1	1	1	1	zinc-ribbon	domain
Lar_restr_allev	PF14354.1	gi|479324718|ref|YP_007864766.1|	-	0.012	15.8	1.0	0.55	10.5	0.1	2.2	1	1	1	2	2	2	0	Restriction	alleviation	protein	Lar
Nudix_N_2	PF14803.1	gi|479324718|ref|YP_007864766.1|	-	0.013	15.1	2.6	0.17	11.6	0.1	2.3	2	0	0	2	2	2	0	Nudix	N-terminal
zinc_ribbon_5	PF13719.1	gi|479324718|ref|YP_007864766.1|	-	0.015	14.8	2.2	0.14	11.7	0.1	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
Zn-ribbon_8	PF09723.5	gi|479324718|ref|YP_007864766.1|	-	0.024	14.5	5.1	2.1	8.3	3.6	2.3	1	1	0	1	1	1	0	Zinc	ribbon	domain
zinc_ribbon_2	PF13240.1	gi|479324718|ref|YP_007864766.1|	-	0.024	14.1	5.8	0.65	9.5	0.6	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
Elf1	PF05129.8	gi|479324718|ref|YP_007864766.1|	-	0.074	12.7	0.3	7.4	6.3	0.0	2.3	1	1	1	2	2	2	0	Transcription	elongation	factor	Elf1	like
DUF2248	PF10005.4	gi|479324718|ref|YP_007864766.1|	-	0.086	11.7	0.0	0.089	11.7	0.0	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2248)
zf-NADH-PPase	PF09297.6	gi|479324718|ref|YP_007864766.1|	-	0.087	12.3	8.5	0.75	9.3	0.6	2.2	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
DUF2387	PF09526.5	gi|479324718|ref|YP_007864766.1|	-	0.089	12.7	0.5	5.6	6.9	0.0	2.2	1	1	1	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
Zn_Tnp_IS1595	PF12760.2	gi|479324718|ref|YP_007864766.1|	-	0.14	11.9	4.5	0.97	9.2	0.1	2.2	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
NRDD	PF13597.1	gi|479324718|ref|YP_007864766.1|	-	0.15	10.1	0.2	0.18	9.8	0.1	1.1	1	0	0	1	1	1	0	Anaerobic	ribonucleoside-triphosphate	reductase
DUF2082	PF09855.4	gi|479324718|ref|YP_007864766.1|	-	0.15	11.8	3.3	3.5	7.5	0.1	2.3	1	1	1	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
Ogr_Delta	PF04606.7	gi|479324718|ref|YP_007864766.1|	-	0.17	11.5	1.2	7.9	6.2	0.0	2.4	2	0	0	2	2	2	0	Ogr/Delta-like	zinc	finger
zinc_ribbon_4	PF13717.1	gi|479324718|ref|YP_007864766.1|	-	0.2	11.3	5.0	0.36	10.5	0.4	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
Zn_ribbon_recom	PF13408.1	gi|479324718|ref|YP_007864766.1|	-	0.45	10.8	4.9	74	3.7	3.3	2.4	1	1	0	1	1	1	0	Recombinase	zinc	beta	ribbon	domain
GFA	PF04828.9	gi|479324718|ref|YP_007864766.1|	-	0.51	10.3	3.1	16	5.5	2.2	2.3	1	1	0	1	1	1	0	Glutathione-dependent	formaldehyde-activating	enzyme
UPF0547	PF10571.4	gi|479324718|ref|YP_007864766.1|	-	0.57	9.9	4.6	5.3	6.8	0.4	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
A2L_zn_ribbon	PF08792.5	gi|479324718|ref|YP_007864766.1|	-	0.59	9.6	5.1	4.4	6.8	0.1	2.9	3	0	0	3	3	3	0	A2L	zinc	ribbon	domain
zf-HYPF	PF07503.7	gi|479324718|ref|YP_007864766.1|	-	1.3	8.5	9.8	2.8	7.4	1.0	2.3	1	1	1	2	2	2	0	HypF	finger
NOB1_Zn_bind	PF08772.6	gi|479324718|ref|YP_007864766.1|	-	1.3	8.8	6.0	7.8	6.3	3.6	2.2	1	1	1	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
Prim_Zn_Ribbon	PF08273.7	gi|479324718|ref|YP_007864766.1|	-	1.9	8.6	5.9	0.7	10.0	0.2	2.5	2	1	1	3	3	2	0	Zinc-binding	domain	of	primase-helicase
zf-C2HC_2	PF13913.1	gi|479324718|ref|YP_007864766.1|	-	4.6	7.0	6.6	10	5.9	0.6	2.3	2	0	0	2	2	2	0	zinc-finger	of	a	C2HC-type
AMP-binding	PF00501.23	gi|479324719|ref|YP_007864767.1|	-	2.3e-81	273.3	0.0	2.9e-81	273.0	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|479324719|ref|YP_007864767.1|	-	2e-18	67.0	0.0	4.6e-18	65.9	0.0	1.7	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
Acyl-CoA_dh_N	PF02771.11	gi|479324720|ref|YP_007864768.1|	-	4.9e-24	85.0	0.1	1.1e-23	83.9	0.0	1.6	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|479324720|ref|YP_007864768.1|	-	4.3e-17	61.3	0.0	8.9e-17	60.3	0.0	1.6	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_1	PF00441.19	gi|479324720|ref|YP_007864768.1|	-	1.1e-14	54.7	0.3	9.7e-12	45.2	0.2	2.3	1	1	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
HpaB_N	PF11794.3	gi|479324720|ref|YP_007864768.1|	-	0.021	14.2	0.0	2.6	7.3	0.0	2.9	2	1	0	2	2	2	0	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
Acyl-CoA_ox_N	PF14749.1	gi|479324720|ref|YP_007864768.1|	-	0.06	13.6	0.0	0.1	12.8	0.0	1.4	1	0	0	1	1	1	0	Acyl-coenzyme	A	oxidase	N-terminal
ECH	PF00378.15	gi|479324721|ref|YP_007864769.1|	-	2.6e-67	226.5	0.0	4.9e-67	225.6	0.0	1.4	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
3HCDH_N	PF02737.13	gi|479324721|ref|YP_007864769.1|	-	2.5e-63	213.0	0.2	4e-63	212.3	0.1	1.3	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
3HCDH	PF00725.17	gi|479324721|ref|YP_007864769.1|	-	1.2e-46	157.0	0.0	1.3e-24	86.4	0.0	2.9	3	0	0	3	3	3	2	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
NAD_binding_2	PF03446.10	gi|479324721|ref|YP_007864769.1|	-	0.0022	17.8	0.0	0.0042	16.9	0.0	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
BEN	PF10523.4	gi|479324721|ref|YP_007864769.1|	-	0.012	15.6	0.0	3.7	7.6	0.0	2.7	2	0	0	2	2	2	0	BEN	domain
2-Hacid_dh_C	PF02826.14	gi|479324721|ref|YP_007864769.1|	-	0.051	12.7	0.0	0.11	11.6	0.0	1.5	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_Gly3P_dh_N	PF01210.18	gi|479324721|ref|YP_007864769.1|	-	0.1	12.3	0.0	0.31	10.7	0.0	1.9	2	0	0	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
ECH_C	PF13766.1	gi|479324721|ref|YP_007864769.1|	-	0.12	12.5	0.0	0.29	11.2	0.0	1.6	1	0	0	1	1	1	0	2-enoyl-CoA	Hydratase	C-terminal	region
Lactamase_B	PF00753.22	gi|479324722|ref|YP_007864770.1|	-	4.7e-27	94.9	0.0	6.9e-27	94.3	0.0	1.3	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|479324722|ref|YP_007864770.1|	-	0.00028	20.4	0.0	0.00095	18.7	0.0	1.9	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|479324722|ref|YP_007864770.1|	-	0.0088	15.7	0.0	0.021	14.5	0.0	1.7	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Glyoxalase	PF00903.20	gi|479324722|ref|YP_007864770.1|	-	0.065	13.2	0.0	0.24	11.3	0.0	1.9	2	0	0	2	2	2	0	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
DUF2458	PF10454.4	gi|479324722|ref|YP_007864770.1|	-	0.069	13.0	0.2	0.13	12.1	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2458)
CHASE3	PF05227.8	gi|479324722|ref|YP_007864770.1|	-	0.1	12.2	0.1	1.8	8.2	0.0	2.2	2	0	0	2	2	2	0	CHASE3	domain
SF3a60_bindingd	PF12108.3	gi|479324722|ref|YP_007864770.1|	-	9.3	5.8	9.4	1.1	8.8	1.8	2.7	3	0	0	3	3	3	0	Splicing	factor	SF3a60	binding	domain
Sugar_tr	PF00083.19	gi|479324723|ref|YP_007864771.1|	-	1e-38	133.0	23.8	1.2e-38	132.9	16.5	1.0	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|479324723|ref|YP_007864771.1|	-	2.2e-31	108.8	34.4	2.2e-31	108.8	23.8	1.8	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
TRI12	PF06609.8	gi|479324723|ref|YP_007864771.1|	-	0.0012	17.1	8.2	0.0019	16.4	5.7	1.3	1	0	0	1	1	1	1	Fungal	trichothecene	efflux	pump	(TRI12)
DUF1228	PF06779.9	gi|479324723|ref|YP_007864771.1|	-	0.019	14.9	0.4	0.019	14.9	0.2	2.6	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1228)
AAA_26	PF13500.1	gi|479324723|ref|YP_007864771.1|	-	0.06	12.9	0.1	0.13	11.8	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
Lactamase_B	PF00753.22	gi|479324725|ref|YP_007864773.1|	-	6.3e-27	94.4	0.0	8.1e-27	94.1	0.0	1.1	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|479324725|ref|YP_007864773.1|	-	0.00074	19.1	0.1	0.0011	18.5	0.1	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
FAA_hydrolase	PF01557.13	gi|479324726|ref|YP_007864774.1|	-	3.2e-47	160.8	0.0	4.4e-47	160.3	0.0	1.2	1	0	0	1	1	1	1	Fumarylacetoacetate	(FAA)	hydrolase	family
Abhydrolase_3	PF07859.8	gi|479324727|ref|YP_007864775.1|	-	1.1e-71	240.7	0.0	1.4e-71	240.4	0.0	1.1	1	0	0	1	1	1	1	alpha/beta	hydrolase	fold
DUF2424	PF10340.4	gi|479324727|ref|YP_007864775.1|	-	4.8e-09	35.3	0.6	7.2e-09	34.7	0.4	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2424)
Peptidase_S9	PF00326.16	gi|479324727|ref|YP_007864775.1|	-	3.4e-07	29.7	0.1	5.3e-07	29.0	0.0	1.2	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
COesterase	PF00135.23	gi|479324727|ref|YP_007864775.1|	-	3.4e-06	26.0	0.7	7.9e-06	24.8	0.5	1.6	1	1	0	1	1	1	1	Carboxylesterase	family
AXE1	PF05448.7	gi|479324727|ref|YP_007864775.1|	-	3.4e-06	25.7	0.2	0.0035	15.8	0.0	2.2	1	1	0	2	2	2	2	Acetyl	xylan	esterase	(AXE1)
Chlorophyllase2	PF12740.2	gi|479324727|ref|YP_007864775.1|	-	2.3e-05	23.3	0.0	3.8e-05	22.7	0.0	1.3	1	0	0	1	1	1	1	Chlorophyllase	enzyme
Abhydrolase_5	PF12695.2	gi|479324727|ref|YP_007864775.1|	-	4e-05	23.3	0.0	5.5e-05	22.9	0.0	1.2	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Peptidase_S15	PF02129.13	gi|479324727|ref|YP_007864775.1|	-	0.012	15.0	0.0	0.05	13.0	0.0	1.9	2	0	0	2	2	2	0	X-Pro	dipeptidyl-peptidase	(S15	family)
PAF-AH_p_II	PF03403.8	gi|479324727|ref|YP_007864775.1|	-	0.036	12.3	0.0	0.32	9.2	0.0	2.0	1	1	1	2	2	2	0	Platelet-activating	factor	acetylhydrolase,	isoform	II
PTE	PF02126.13	gi|479324728|ref|YP_007864776.1|	-	6e-81	271.8	0.0	6.8e-81	271.6	0.0	1.0	1	0	0	1	1	1	1	Phosphotriesterase	family
AMP-binding	PF00501.23	gi|479324729|ref|YP_007864777.1|	-	1.6e-104	349.6	0.0	1.9e-104	349.3	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|479324729|ref|YP_007864777.1|	-	3e-18	66.5	0.1	6.1e-18	65.5	0.1	1.6	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
COXG	PF06240.8	gi|479324730|ref|YP_007864778.1|	-	4.3e-41	139.8	0.1	4.7e-41	139.7	0.1	1.0	1	0	0	1	1	1	1	Carbon	monoxide	dehydrogenase	subunit	G	(CoxG)
AA_synth	PF06684.6	gi|479324730|ref|YP_007864778.1|	-	0.12	11.7	0.0	0.13	11.5	0.0	1.1	1	0	0	1	1	1	0	Amino	acid	synthesis
Ret_tiss	PF10044.4	gi|479324730|ref|YP_007864778.1|	-	0.13	12.8	0.0	1.6	9.2	0.0	2.1	2	0	0	2	2	2	0	Retinal	tissue	protein
DAO	PF01266.19	gi|479324731|ref|YP_007864779.1|	-	2.6e-50	171.3	0.0	3e-50	171.1	0.0	1.0	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
FAD_binding_3	PF01494.14	gi|479324731|ref|YP_007864779.1|	-	1.3e-07	31.0	0.2	0.0004	19.5	0.4	2.3	2	1	0	2	2	2	2	FAD	binding	domain
FAD_binding_2	PF00890.19	gi|479324731|ref|YP_007864779.1|	-	1.1e-05	24.4	0.3	0.0017	17.2	0.1	2.1	2	0	0	2	2	2	2	FAD	binding	domain
Pyr_redox_2	PF07992.9	gi|479324731|ref|YP_007864779.1|	-	0.00011	22.1	0.6	0.00064	19.6	0.4	2.0	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|479324731|ref|YP_007864779.1|	-	0.00023	21.1	1.0	0.00056	19.8	0.2	2.0	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Mqo	PF06039.10	gi|479324731|ref|YP_007864779.1|	-	0.0039	15.4	0.0	0.0062	14.7	0.0	1.2	1	0	0	1	1	1	1	Malate:quinone	oxidoreductase	(Mqo)
HI0933_like	PF03486.9	gi|479324731|ref|YP_007864779.1|	-	0.009	14.5	0.2	0.017	13.6	0.1	1.4	1	0	0	1	1	1	1	HI0933-like	protein
FAD_oxidored	PF12831.2	gi|479324731|ref|YP_007864779.1|	-	0.015	14.4	0.5	0.029	13.4	0.4	1.7	1	1	0	1	1	1	0	FAD	dependent	oxidoreductase
GIDA	PF01134.17	gi|479324731|ref|YP_007864779.1|	-	0.024	13.5	1.4	0.086	11.6	0.1	2.0	2	0	0	2	2	2	0	Glucose	inhibited	division	protein	A
Pyr_redox_3	PF13738.1	gi|479324731|ref|YP_007864779.1|	-	0.037	14.0	0.1	0.12	12.4	0.0	1.8	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|479324731|ref|YP_007864779.1|	-	0.039	14.3	4.7	0.12	12.8	0.4	3.2	4	0	0	4	4	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
Trp_halogenase	PF04820.9	gi|479324731|ref|YP_007864779.1|	-	0.063	11.9	0.4	0.098	11.2	0.3	1.2	1	0	0	1	1	1	0	Tryptophan	halogenase
Thi4	PF01946.12	gi|479324731|ref|YP_007864779.1|	-	0.2	10.7	6.4	0.16	11.0	0.8	2.5	1	1	0	2	2	2	0	Thi4	family
Papilloma_E5A	PF05776.7	gi|479324732|ref|YP_007864780.1|	-	0.15	12.2	0.7	0.14	12.2	0.5	1.2	1	0	0	1	1	1	0	Papillomavirus	E5A	protein
FGGY_N	PF00370.16	gi|479324733|ref|YP_007864781.1|	-	9e-17	61.1	0.0	1e-16	61.0	0.0	1.0	1	0	0	1	1	1	1	FGGY	family	of	carbohydrate	kinases,	N-terminal	domain
BcrAD_BadFG	PF01869.15	gi|479324733|ref|YP_007864781.1|	-	0.053	12.8	0.0	0.065	12.5	0.0	1.1	1	0	0	1	1	1	0	BadF/BadG/BcrA/BcrD	ATPase	family
dCMP_cyt_deam_1	PF00383.17	gi|479324733|ref|YP_007864781.1|	-	0.14	11.8	0.0	0.15	11.6	0.0	1.1	1	0	0	1	1	1	0	Cytidine	and	deoxycytidylate	deaminase	zinc-binding	region
Sugar_tr	PF00083.19	gi|479324734|ref|YP_007864782.1|	-	1.4e-07	30.4	3.8	1.4e-07	30.4	2.6	1.0	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
PepSY_TM_2	PF13703.1	gi|479324735|ref|YP_007864783.1|	-	0.032	14.3	1.6	0.044	13.9	1.1	1.4	1	1	0	1	1	1	0	PepSY-associated	TM	helix
MFS_1	PF07690.11	gi|479324735|ref|YP_007864783.1|	-	0.069	11.8	1.9	0.069	11.8	1.3	1.0	1	0	0	1	1	1	0	Major	Facilitator	Superfamily
ABC2_membrane	PF01061.19	gi|479324736|ref|YP_007864784.1|	-	2.3e-36	124.9	21.9	2.3e-36	124.9	15.2	2.0	1	1	1	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.2	gi|479324736|ref|YP_007864784.1|	-	7.7e-18	64.6	27.6	7.7e-18	64.6	19.1	1.7	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.2	gi|479324736|ref|YP_007864784.1|	-	2.8e-11	42.8	21.0	3.3e-11	42.5	14.6	1.1	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|479324736|ref|YP_007864784.1|	-	3.1e-09	36.3	32.9	5.1e-09	35.6	22.8	1.3	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_5	PF13346.1	gi|479324736|ref|YP_007864784.1|	-	0.00098	18.4	18.6	0.00098	18.4	12.9	2.2	2	1	0	2	2	2	1	ABC-2	family	transporter	protein
ABC_tran	PF00005.22	gi|479324737|ref|YP_007864785.1|	-	3.6e-31	108.2	0.0	5.7e-31	107.6	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|479324737|ref|YP_007864785.1|	-	5.8e-14	52.7	0.1	1.7e-09	38.0	0.0	2.3	1	1	0	2	2	2	2	AAA	domain
DUF4162	PF13732.1	gi|479324737|ref|YP_007864785.1|	-	1.3e-12	47.9	0.1	2.8e-12	46.9	0.1	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4162)
AAA_23	PF13476.1	gi|479324737|ref|YP_007864785.1|	-	6.7e-06	26.5	0.6	8.9e-06	26.1	0.4	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|479324737|ref|YP_007864785.1|	-	1.6e-05	24.3	0.1	2.8e-05	23.5	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.1	gi|479324737|ref|YP_007864785.1|	-	6.9e-05	22.0	0.1	0.0028	16.7	0.0	2.2	2	0	0	2	2	2	1	AAA	ATPase	domain
SMC_N	PF02463.14	gi|479324737|ref|YP_007864785.1|	-	0.0011	18.2	0.3	0.023	13.9	0.0	2.4	2	1	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
SbcCD_C	PF13558.1	gi|479324737|ref|YP_007864785.1|	-	0.055	13.3	0.0	0.15	12.0	0.0	1.8	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
DUF258	PF03193.11	gi|479324737|ref|YP_007864785.1|	-	0.082	12.0	0.0	0.12	11.5	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_33	PF13671.1	gi|479324737|ref|YP_007864785.1|	-	0.098	12.5	0.1	0.19	11.5	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|479324737|ref|YP_007864785.1|	-	0.14	12.3	1.3	1.3	9.2	0.3	2.5	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
PadR	PF03551.9	gi|479324738|ref|YP_007864786.1|	-	2.3e-10	40.1	0.0	4.7e-10	39.0	0.0	1.6	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_45	PF14947.1	gi|479324738|ref|YP_007864786.1|	-	0.00022	20.9	0.2	0.00055	19.6	0.0	1.8	2	0	0	2	2	2	1	Winged	helix-turn-helix
Phage_Mu_Gam	PF07352.7	gi|479324738|ref|YP_007864786.1|	-	0.036	13.5	2.8	0.048	13.1	2.0	1.2	1	0	0	1	1	1	0	Bacteriophage	Mu	Gam	like	protein
TrmB	PF01978.14	gi|479324738|ref|YP_007864786.1|	-	0.1	12.3	0.1	0.58	9.9	0.0	2.1	1	1	1	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
DUF807	PF05660.6	gi|479324738|ref|YP_007864786.1|	-	0.12	11.9	0.1	0.24	11.0	0.0	1.5	2	0	0	2	2	2	0	Coxiella	burnetii	protein	of	unknown	function	(DUF807)
Arch_ATPase	PF01637.13	gi|479324739|ref|YP_007864787.1|	-	9.2e-08	32.0	0.0	1.1e-07	31.7	0.0	1.1	1	0	0	1	1	1	1	Archaeal	ATPase
AAA_16	PF13191.1	gi|479324739|ref|YP_007864787.1|	-	0.0092	15.9	0.0	0.0095	15.9	0.0	1.1	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_14	PF13173.1	gi|479324739|ref|YP_007864787.1|	-	0.034	14.0	0.1	0.044	13.6	0.1	1.2	1	0	0	1	1	1	0	AAA	domain
4HBT	PF03061.17	gi|479324740|ref|YP_007864788.1|	-	2.6e-16	59.5	0.0	3.9e-16	58.9	0.0	1.3	1	0	0	1	1	1	1	Thioesterase	superfamily
4HBT_3	PF13622.1	gi|479324740|ref|YP_007864788.1|	-	0.00088	19.0	0.0	0.0011	18.7	0.0	1.1	1	0	0	1	1	1	1	Thioesterase-like	superfamily
DUF4442	PF14539.1	gi|479324740|ref|YP_007864788.1|	-	0.011	15.6	0.0	0.015	15.2	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4442)
DUF2551	PF10826.3	gi|479324741|ref|YP_007864789.1|	-	0.026	14.4	0.8	2.1	8.3	0.0	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2551)
PqqD	PF05402.7	gi|479324741|ref|YP_007864789.1|	-	0.1	12.6	0.2	0.32	11.0	0.0	1.8	1	1	1	2	2	2	0	Coenzyme	PQQ	synthesis	protein	D	(PqqD)
DUF1803	PF08820.5	gi|479324741|ref|YP_007864789.1|	-	0.12	12.0	0.9	0.26	11.0	0.7	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1803)
HisKA	PF00512.20	gi|479324741|ref|YP_007864789.1|	-	0.13	12.2	0.4	0.29	11.1	0.3	1.7	1	1	0	1	1	1	0	His	Kinase	A	(phospho-acceptor)	domain
DUF3186	PF11382.3	gi|479324741|ref|YP_007864789.1|	-	0.13	11.3	0.7	0.16	11.1	0.5	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3186)
L31	PF09784.4	gi|479324741|ref|YP_007864789.1|	-	0.38	10.8	1.6	0.5	10.4	0.9	1.4	1	1	0	1	1	1	0	Mitochondrial	ribosomal	protein	L31
ATP-cone	PF03477.11	gi|479324741|ref|YP_007864789.1|	-	0.46	10.9	4.2	4.5	7.7	0.3	2.1	1	1	1	2	2	2	0	ATP	cone	domain
Rdx	PF10262.4	gi|479324742|ref|YP_007864790.1|	-	2.3e-18	65.9	0.0	3.3e-18	65.4	0.0	1.2	1	0	0	1	1	1	1	Rdx	family
YHS	PF04945.8	gi|479324742|ref|YP_007864790.1|	-	3.6e-14	52.3	0.3	5.3e-14	51.7	0.2	1.3	1	0	0	1	1	1	1	YHS	domain
zf-FCS	PF06467.9	gi|479324742|ref|YP_007864790.1|	-	0.0018	17.8	0.5	0.0032	17.0	0.3	1.4	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
Arc_trans_TRASH	PF08394.5	gi|479324742|ref|YP_007864790.1|	-	0.0025	17.9	2.0	0.0025	17.9	1.4	1.6	2	0	0	2	2	2	1	Archaeal	TRASH	domain
Pyr_redox_2	PF07992.9	gi|479324743|ref|YP_007864791.1|	-	9.4e-33	113.7	0.0	3.7e-32	111.8	0.0	3.0	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|479324743|ref|YP_007864791.1|	-	5e-17	62.0	2.2	6.1e-16	58.6	0.3	3.0	4	0	0	4	4	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Reductase_C	PF14759.1	gi|479324743|ref|YP_007864791.1|	-	8.8e-15	54.7	0.0	3.3e-14	52.9	0.0	1.9	2	0	0	2	2	2	1	Reductase	C-terminal
DAO	PF01266.19	gi|479324743|ref|YP_007864791.1|	-	8.9e-06	24.8	0.3	0.046	12.6	0.2	3.3	3	0	0	3	3	3	1	FAD	dependent	oxidoreductase
CPSase_L_chain	PF00289.17	gi|479324743|ref|YP_007864791.1|	-	0.00055	20.0	0.0	0.02	14.9	0.0	2.4	2	0	0	2	2	2	1	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
Pyr_redox_3	PF13738.1	gi|479324743|ref|YP_007864791.1|	-	0.00061	19.9	0.1	1.8	8.5	0.1	3.1	2	1	1	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Shikimate_DH	PF01488.15	gi|479324743|ref|YP_007864791.1|	-	0.00062	19.8	1.9	0.3	11.1	0.2	3.6	4	1	0	4	4	3	1	Shikimate	/	quinate	5-dehydrogenase
NAD_binding_9	PF13454.1	gi|479324743|ref|YP_007864791.1|	-	0.00091	19.0	0.1	2.6	7.7	0.0	3.9	3	1	1	4	4	4	1	FAD-NAD(P)-binding
ThiF	PF00899.16	gi|479324743|ref|YP_007864791.1|	-	0.0012	18.6	0.0	0.13	12.0	0.1	2.9	3	0	0	3	3	3	1	ThiF	family
FAD_binding_3	PF01494.14	gi|479324743|ref|YP_007864791.1|	-	0.0026	16.8	0.1	0.03	13.3	0.1	2.0	2	0	0	2	2	2	1	FAD	binding	domain
FAD_binding_2	PF00890.19	gi|479324743|ref|YP_007864791.1|	-	0.0078	15.0	0.0	9.8	4.9	0.0	3.1	3	0	0	3	3	3	0	FAD	binding	domain
NAD_binding_7	PF13241.1	gi|479324743|ref|YP_007864791.1|	-	0.0081	16.3	0.0	1.6	9.0	0.1	2.4	2	0	0	2	2	2	1	Putative	NAD(P)-binding
TrkA_N	PF02254.13	gi|479324743|ref|YP_007864791.1|	-	0.011	15.7	0.2	2.5	8.1	0.1	2.5	2	0	0	2	2	2	0	TrkA-N	domain
NAD_binding_8	PF13450.1	gi|479324743|ref|YP_007864791.1|	-	0.022	14.7	0.2	2	8.5	0.1	2.6	2	0	0	2	2	2	0	NAD(P)-binding	Rossmann-like	domain
Lycopene_cycl	PF05834.7	gi|479324743|ref|YP_007864791.1|	-	0.035	13.0	0.1	38	3.0	0.1	3.6	3	1	1	4	4	4	0	Lycopene	cyclase	protein
DUF1188	PF06690.6	gi|479324743|ref|YP_007864791.1|	-	0.048	12.8	0.0	0.088	11.9	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1188)
AlaDh_PNT_C	PF01262.16	gi|479324743|ref|YP_007864791.1|	-	0.07	12.6	0.0	15	5.1	0.0	2.4	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
GIDA	PF01134.17	gi|479324743|ref|YP_007864791.1|	-	0.081	11.7	0.5	1.4	7.6	0.3	2.8	3	1	2	5	5	5	0	Glucose	inhibited	division	protein	A
2-Hacid_dh_C	PF02826.14	gi|479324743|ref|YP_007864791.1|	-	0.1	11.7	0.0	0.24	10.5	0.0	1.6	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
3HCDH_N	PF02737.13	gi|479324743|ref|YP_007864791.1|	-	0.12	12.0	0.2	0.2	11.2	0.2	1.4	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
UDPG_MGDP_dh_N	PF03721.9	gi|479324743|ref|YP_007864791.1|	-	0.12	11.7	0.5	0.24	10.7	0.3	1.5	1	1	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Methyltransf_23	PF13489.1	gi|479324744|ref|YP_007864792.1|	-	0.15	11.8	0.0	0.16	11.6	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
Glyco_hydro_12	PF01670.11	gi|479324745|ref|YP_007864793.1|	-	4e-15	55.9	1.4	9.9e-15	54.6	0.9	1.6	1	1	0	1	1	1	1	Glycosyl	hydrolase	family	12
UPF0047	PF01894.12	gi|479324746|ref|YP_007864794.1|	-	1.8e-36	124.5	0.0	2.3e-36	124.1	0.0	1.2	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0047
Luciferase_N	PF05295.6	gi|479324746|ref|YP_007864794.1|	-	0.045	13.5	0.0	0.096	12.5	0.0	1.5	1	1	0	1	1	1	0	Luciferase/LBP	N-terminal	domain
Transglut_core	PF01841.14	gi|479324747|ref|YP_007864795.1|	-	1.7e-19	70.1	0.0	3e-19	69.3	0.0	1.4	1	0	0	1	1	1	1	Transglutaminase-like	superfamily
DUF553	PF04473.7	gi|479324747|ref|YP_007864795.1|	-	2.1e-06	27.0	0.0	3e-06	26.5	0.0	1.3	1	0	0	1	1	1	1	Transglutaminase-like	domain
Transglut_core3	PF13471.1	gi|479324747|ref|YP_007864795.1|	-	1.5e-05	24.7	0.0	2.3e-05	24.1	0.0	1.2	1	0	0	1	1	1	1	Transglutaminase-like	superfamily
Bact_transglu_N	PF08379.5	gi|479324747|ref|YP_007864795.1|	-	0.017	15.3	0.0	0.032	14.5	0.0	1.5	1	0	0	1	1	1	0	Bacterial	transglutaminase-like	N-terminal	region
DUF973	PF06157.6	gi|479324748|ref|YP_007864796.1|	-	3.1e-25	88.7	6.0	3.7e-25	88.4	4.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
HTH_24	PF13412.1	gi|479324749|ref|YP_007864797.1|	-	9e-15	53.7	1.8	2.5e-14	52.3	1.2	1.8	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|479324749|ref|YP_007864797.1|	-	9.4e-13	47.4	0.4	2.3e-12	46.2	0.1	1.8	2	0	0	2	2	1	1	AsnC-type	helix-turn-helix	domain
AsnC_trans_reg	PF01037.16	gi|479324749|ref|YP_007864797.1|	-	6.8e-09	35.3	0.0	1.1e-08	34.7	0.0	1.3	1	0	0	1	1	1	1	AsnC	family
HTH_20	PF12840.2	gi|479324749|ref|YP_007864797.1|	-	7e-08	32.1	0.0	1.4e-07	31.1	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
Sigma70_r4	PF04545.11	gi|479324749|ref|YP_007864797.1|	-	3.2e-06	26.3	0.2	2.1e-05	23.7	0.1	2.2	2	0	0	2	2	2	1	Sigma-70,	region	4
HTH_23	PF13384.1	gi|479324749|ref|YP_007864797.1|	-	9.2e-06	25.1	0.1	0.00077	19.0	0.0	3.0	3	0	0	3	3	3	1	Homeodomain-like	domain
MarR	PF01047.17	gi|479324749|ref|YP_007864797.1|	-	9.7e-05	21.9	0.0	0.00029	20.4	0.0	1.8	2	0	0	2	2	2	1	MarR	family
HTH_11	PF08279.7	gi|479324749|ref|YP_007864797.1|	-	0.00013	21.5	0.7	0.00027	20.5	0.2	1.8	2	0	0	2	2	1	1	HTH	domain
MarR_2	PF12802.2	gi|479324749|ref|YP_007864797.1|	-	0.00016	21.2	0.0	0.00091	18.8	0.0	2.0	2	0	0	2	2	2	1	MarR	family
HTH_30	PF13556.1	gi|479324749|ref|YP_007864797.1|	-	0.00042	19.8	0.0	0.002	17.6	0.0	2.1	2	0	0	2	2	2	1	PucR	C-terminal	helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|479324749|ref|YP_007864797.1|	-	0.00054	19.3	0.3	0.0015	17.9	0.0	1.8	2	0	0	2	2	2	1	Sigma-70,	region	4
HTH_DeoR	PF08220.7	gi|479324749|ref|YP_007864797.1|	-	0.00078	18.9	0.1	0.0069	15.9	0.1	2.3	3	0	0	3	3	2	1	DeoR-like	helix-turn-helix	domain
MerR_1	PF13411.1	gi|479324749|ref|YP_007864797.1|	-	0.00091	18.9	0.2	0.61	9.8	0.0	2.8	3	0	0	3	3	3	1	MerR	HTH	family	regulatory	protein
HTH_28	PF13518.1	gi|479324749|ref|YP_007864797.1|	-	0.0019	18.1	0.1	0.022	14.7	0.0	2.5	3	0	0	3	3	3	1	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|479324749|ref|YP_007864797.1|	-	0.0023	17.5	0.0	0.004	16.7	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_8	PF02954.14	gi|479324749|ref|YP_007864797.1|	-	0.0044	16.5	0.1	0.024	14.1	0.1	2.1	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	Fis	family
TrmB	PF01978.14	gi|479324749|ref|YP_007864797.1|	-	0.0068	16.0	0.1	0.016	14.9	0.1	1.6	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.5	gi|479324749|ref|YP_007864797.1|	-	0.0069	15.9	0.0	0.013	15.0	0.0	1.5	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
MerR	PF00376.18	gi|479324749|ref|YP_007864797.1|	-	0.0071	15.8	0.0	0.053	13.0	0.0	2.2	2	0	0	2	2	2	1	MerR	family	regulatory	protein
HTH_27	PF13463.1	gi|479324749|ref|YP_007864797.1|	-	0.0076	16.5	0.1	0.072	13.4	0.1	2.2	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_10	PF04967.7	gi|479324749|ref|YP_007864797.1|	-	0.011	15.2	0.3	0.045	13.3	0.0	2.1	3	0	0	3	3	2	0	HTH	DNA	binding	domain
TFIIE_alpha	PF02002.12	gi|479324749|ref|YP_007864797.1|	-	0.015	14.7	1.2	0.023	14.1	0.2	1.8	2	0	0	2	2	2	0	TFIIE	alpha	subunit
DUF742	PF05331.6	gi|479324749|ref|YP_007864797.1|	-	0.019	14.5	0.0	0.034	13.7	0.0	1.5	2	0	0	2	2	1	0	Protein	of	unknown	function	(DUF742)
HTH_38	PF13936.1	gi|479324749|ref|YP_007864797.1|	-	0.031	13.8	2.0	0.076	12.5	0.1	2.4	3	0	0	3	3	2	0	Helix-turn-helix	domain
DDRGK	PF09756.4	gi|479324749|ref|YP_007864797.1|	-	0.034	13.5	0.1	0.05	13.0	0.1	1.2	1	0	0	1	1	1	0	DDRGK	domain
HTH_12	PF08461.5	gi|479324749|ref|YP_007864797.1|	-	0.043	13.5	1.7	0.5	10.1	0.6	2.6	2	1	0	2	2	2	0	Ribonuclease	R	winged-helix	domain
HTH_3	PF01381.17	gi|479324749|ref|YP_007864797.1|	-	0.044	13.6	0.6	0.76	9.6	0.0	2.8	3	0	0	3	3	3	0	Helix-turn-helix
Phage_CI_repr	PF07022.8	gi|479324749|ref|YP_007864797.1|	-	0.062	13.3	0.0	0.31	11.1	0.0	2.0	2	0	0	2	2	2	0	Bacteriophage	CI	repressor	helix-turn-helix	domain
Ribosomal_S25	PF03297.10	gi|479324749|ref|YP_007864797.1|	-	0.064	13.2	0.7	2.1	8.4	0.0	2.2	2	0	0	2	2	2	0	S25	ribosomal	protein
DUF2089	PF09862.4	gi|479324749|ref|YP_007864797.1|	-	0.066	13.0	0.1	0.15	11.8	0.0	1.6	2	0	0	2	2	1	0	Protein	of	unknown	function	(DUF2089)
RHH_3	PF12651.2	gi|479324749|ref|YP_007864797.1|	-	0.085	12.5	0.9	0.25	11.1	0.1	2.0	2	0	0	2	2	2	0	Ribbon-helix-helix	domain
Mga	PF05043.8	gi|479324749|ref|YP_007864797.1|	-	0.099	12.9	0.1	0.29	11.4	0.0	1.8	2	0	0	2	2	1	0	Mga	helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|479324749|ref|YP_007864797.1|	-	0.13	12.1	0.1	0.9	9.5	0.0	2.3	3	0	0	3	3	3	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
TPP_enzyme_C	PF02775.16	gi|479324750|ref|YP_007864798.1|	-	1.3e-18	66.9	0.1	2e-18	66.4	0.1	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
DXP_synthase_N	PF13292.1	gi|479324750|ref|YP_007864798.1|	-	0.00058	18.8	0.1	0.0016	17.4	0.0	1.7	2	0	0	2	2	2	1	1-deoxy-D-xylulose-5-phosphate	synthase
GHMP_kinases_N	PF00288.21	gi|479324750|ref|YP_007864798.1|	-	0.011	15.8	0.3	0.02	14.9	0.2	1.4	1	0	0	1	1	1	0	GHMP	kinases	N	terminal	domain
CoA_binding_3	PF13727.1	gi|479324750|ref|YP_007864798.1|	-	0.03	14.1	0.1	0.046	13.5	0.1	1.3	1	0	0	1	1	1	0	CoA-binding	domain
POR_N	PF01855.14	gi|479324751|ref|YP_007864799.1|	-	3.8e-65	219.6	0.1	4.9e-65	219.2	0.0	1.1	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Transketolase_C	PF02780.15	gi|479324751|ref|YP_007864799.1|	-	6.3e-05	22.9	0.0	0.00019	21.3	0.0	1.8	2	0	0	2	2	2	1	Transketolase,	C-terminal	domain
TPP_enzyme_N	PF02776.13	gi|479324751|ref|YP_007864799.1|	-	0.00014	21.3	0.6	0.00033	20.1	0.4	1.6	1	1	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
Fer4_21	PF14697.1	gi|479324752|ref|YP_007864800.1|	-	2.1e-12	46.6	13.6	3.2e-12	46.0	9.4	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|479324752|ref|YP_007864800.1|	-	1.7e-09	36.8	19.5	1.4e-05	24.4	3.9	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|479324752|ref|YP_007864800.1|	-	4.4e-07	29.4	13.5	0.0026	17.5	2.0	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|479324752|ref|YP_007864800.1|	-	1.4e-06	28.5	13.1	2.8e-06	27.6	9.1	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|479324752|ref|YP_007864800.1|	-	3.1e-06	27.3	18.2	6.8e-06	26.2	12.6	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|479324752|ref|YP_007864800.1|	-	5e-06	26.2	13.1	9.9e-06	25.2	9.1	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|479324752|ref|YP_007864800.1|	-	1.2e-05	25.8	10.8	0.00025	21.7	0.9	2.5	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_17	PF13534.1	gi|479324752|ref|YP_007864800.1|	-	6.6e-05	23.1	7.9	0.038	14.3	1.1	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|479324752|ref|YP_007864800.1|	-	0.00064	19.7	13.0	0.0022	18.0	1.7	2.3	1	1	2	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|479324752|ref|YP_007864800.1|	-	0.0025	18.0	17.9	0.03	14.6	3.4	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_13	PF13370.1	gi|479324752|ref|YP_007864800.1|	-	0.0038	17.5	5.4	0.0038	17.5	3.7	3.1	2	1	1	3	3	3	1	4Fe-4S	single	cluster	domain
Fer4_6	PF12837.2	gi|479324752|ref|YP_007864800.1|	-	0.035	13.9	8.3	0.035	13.9	5.8	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|479324752|ref|YP_007864800.1|	-	0.18	12.4	17.8	0.17	12.4	3.3	2.5	1	1	1	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.1	gi|479324752|ref|YP_007864800.1|	-	0.21	12.0	17.7	0.41	11.1	5.0	2.8	2	2	0	2	2	2	0	4Fe-4S	dicluster	domain
MFS_1	PF07690.11	gi|479324753|ref|YP_007864801.1|	-	6.7e-39	133.5	49.8	8.8e-39	133.1	31.6	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|479324753|ref|YP_007864801.1|	-	8.8e-06	24.5	12.9	8.8e-06	24.5	8.9	3.0	1	1	1	2	2	2	2	Sugar	(and	other)	transporter
Lactate_perm	PF02652.9	gi|479324754|ref|YP_007864802.1|	-	1.5e-106	356.9	36.7	2.2e-106	356.4	25.5	1.2	1	0	0	1	1	1	1	L-lactate	permease
FR47	PF08445.5	gi|479324755|ref|YP_007864803.1|	-	2.5e-05	23.9	0.0	2.8e-05	23.7	0.0	1.1	1	0	0	1	1	1	1	FR47-like	protein
MFS_2	PF13347.1	gi|479324756|ref|YP_007864804.1|	-	1e-09	37.3	10.9	1e-09	37.3	7.5	1.5	1	1	0	1	1	1	1	MFS/sugar	transport	protein
MFS_1	PF07690.11	gi|479324756|ref|YP_007864804.1|	-	3.1e-08	32.7	15.6	3.1e-08	32.7	10.8	1.9	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
Amidase	PF01425.16	gi|479324757|ref|YP_007864805.1|	-	1.2e-106	357.2	0.0	1.5e-106	356.9	0.0	1.0	1	0	0	1	1	1	1	Amidase
AhpC-TSA	PF00578.16	gi|479324758|ref|YP_007864806.1|	-	7e-35	119.4	0.0	1.6e-34	118.2	0.0	1.6	2	0	0	2	2	2	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|479324758|ref|YP_007864806.1|	-	7.9e-17	61.1	0.0	1.2e-16	60.5	0.0	1.3	1	1	0	1	1	1	1	Redoxin
1-cysPrx_C	PF10417.4	gi|479324758|ref|YP_007864806.1|	-	3.2e-13	49.0	0.1	6.2e-13	48.1	0.1	1.4	1	0	0	1	1	1	1	C-terminal	domain	of	1-Cys	peroxiredoxin
Nitro_FeMo-Co	PF02579.12	gi|479324759|ref|YP_007864807.1|	-	2.5e-12	46.6	0.1	3.5e-12	46.2	0.0	1.2	1	0	0	1	1	1	1	Dinitrogenase	iron-molybdenum	cofactor
Peripla_BP_4	PF13407.1	gi|479324759|ref|YP_007864807.1|	-	0.12	11.6	0.0	0.16	11.2	0.0	1.2	1	0	0	1	1	1	0	Periplasmic	binding	protein	domain
DUF1422	PF07226.6	gi|479324760|ref|YP_007864808.1|	-	0.079	12.6	0.2	0.087	12.5	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1422)
DUF3311	PF11755.3	gi|479324762|ref|YP_007864810.1|	-	4.2e-16	58.2	7.4	4.6e-16	58.0	5.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3311)
7tm_7	PF08395.7	gi|479324762|ref|YP_007864810.1|	-	0.0071	15.4	4.1	0.0078	15.2	2.9	1.0	1	0	0	1	1	1	1	7tm	Chemosensory	receptor
DctQ	PF04290.7	gi|479324762|ref|YP_007864810.1|	-	0.17	11.6	4.5	0.19	11.5	3.1	1.1	1	0	0	1	1	1	0	Tripartite	ATP-independent	periplasmic	transporters,	DctQ	component
HIG_1_N	PF04588.8	gi|479324762|ref|YP_007864810.1|	-	0.2	11.3	1.5	12	5.7	0.2	2.1	2	0	0	2	2	2	0	Hypoxia	induced	protein	conserved	region
DUF997	PF06196.7	gi|479324762|ref|YP_007864810.1|	-	0.25	10.8	4.3	0.29	10.6	3.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF997)
DUF485	PF04341.7	gi|479324762|ref|YP_007864810.1|	-	0.4	10.4	6.2	0.5	10.1	4.3	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF485
7kD_coat	PF02495.12	gi|479324762|ref|YP_007864810.1|	-	0.56	9.6	2.8	7.4	6.1	0.2	2.1	2	0	0	2	2	2	0	7kD	viral	coat	protein
SdpI	PF13630.1	gi|479324762|ref|YP_007864810.1|	-	2.6	7.8	8.8	4.3	7.1	6.1	1.4	1	1	0	1	1	1	0	SdpI/YhfL	protein	family
SSF	PF00474.12	gi|479324763|ref|YP_007864811.1|	-	1.8e-16	59.8	31.6	3.1e-16	59.0	21.9	1.4	1	0	0	1	1	1	1	Sodium:solute	symporter	family
DUF2434	PF10361.4	gi|479324763|ref|YP_007864811.1|	-	0.0039	16.2	1.1	0.0098	14.9	0.8	1.7	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2434)
DUF1294	PF06961.8	gi|479324763|ref|YP_007864811.1|	-	0.56	10.1	3.1	0.84	9.6	0.4	2.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1294)
Amidohydro_2	PF04909.9	gi|479324764|ref|YP_007864812.1|	-	9.8e-49	166.3	0.0	1.1e-48	166.1	0.0	1.0	1	0	0	1	1	1	1	Amidohydrolase
DUF973	PF06157.6	gi|479324765|ref|YP_007864813.1|	-	2.4e-39	135.0	34.3	2.9e-39	134.7	23.7	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
HTH_11	PF08279.7	gi|479324766|ref|YP_007864814.1|	-	0.0071	15.9	0.5	0.013	15.0	0.4	1.4	1	0	0	1	1	1	1	HTH	domain
HTH_9	PF08221.6	gi|479324766|ref|YP_007864814.1|	-	0.17	11.8	0.9	0.32	10.9	0.6	1.4	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
Collagen	PF01391.13	gi|479324767|ref|YP_007864815.1|	-	0.029	13.9	0.6	0.046	13.2	0.4	1.2	1	0	0	1	1	1	0	Collagen	triple	helix	repeat	(20	copies)
OrfB_Zn_ribbon	PF07282.6	gi|479327025|ref|YP_007864816.1|	-	1.1e-20	73.0	2.9	1.3e-20	72.7	0.1	2.5	3	0	0	3	3	3	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|479327025|ref|YP_007864816.1|	-	2e-08	33.9	0.2	3.7e-08	33.0	0.1	1.4	1	0	0	1	1	1	1	Probable	transposase
zf-RING_4	PF14570.1	gi|479327025|ref|YP_007864816.1|	-	0.091	12.3	2.8	0.075	12.6	0.9	1.6	2	0	0	2	2	2	0	RING/Ubox	like	zinc-binding	domain
DAO	PF01266.19	gi|479324768|ref|YP_007864817.1|	-	1.3e-15	57.1	0.0	1.2e-06	27.6	0.0	2.3	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|479324768|ref|YP_007864817.1|	-	3.9e-11	42.8	0.0	1.9e-10	40.6	0.0	2.1	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.19	gi|479324768|ref|YP_007864817.1|	-	7.1e-10	38.2	1.2	2.8e-05	23.1	0.1	2.6	3	0	0	3	3	3	2	FAD	binding	domain
Thi4	PF01946.12	gi|479324768|ref|YP_007864817.1|	-	3.3e-09	36.1	2.0	2.3e-07	30.1	0.0	2.5	2	0	0	2	2	2	1	Thi4	family
Pyr_redox	PF00070.22	gi|479324768|ref|YP_007864817.1|	-	7.2e-09	35.9	1.7	0.0066	16.8	0.1	3.4	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|479324768|ref|YP_007864817.1|	-	2.2e-08	32.9	0.9	5.2e-05	21.8	0.1	2.2	2	0	0	2	2	2	2	HI0933-like	protein
Amino_oxidase	PF01593.19	gi|479324768|ref|YP_007864817.1|	-	1.6e-06	27.5	0.1	9.3e-06	24.9	0.0	2.2	2	1	0	2	2	2	1	Flavin	containing	amine	oxidoreductase
Pyr_redox_2	PF07992.9	gi|479324768|ref|YP_007864817.1|	-	1.9e-06	27.8	0.1	1.6e-05	24.8	0.0	2.1	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|479324768|ref|YP_007864817.1|	-	7.8e-06	25.1	0.1	6.8e-05	22.0	0.1	2.0	2	0	0	2	2	2	1	FAD	binding	domain
GIDA	PF01134.17	gi|479324768|ref|YP_007864817.1|	-	8e-06	24.9	3.9	0.00075	18.4	0.0	2.5	3	0	0	3	3	3	2	Glucose	inhibited	division	protein	A
Pyr_redox_3	PF13738.1	gi|479324768|ref|YP_007864817.1|	-	4.6e-05	23.5	0.1	0.00027	21.0	0.0	2.1	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_oxidored	PF12831.2	gi|479324768|ref|YP_007864817.1|	-	5.7e-05	22.3	0.3	0.00029	20.0	0.0	1.9	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
GDI	PF00996.13	gi|479324768|ref|YP_007864817.1|	-	0.00024	19.5	0.5	0.12	10.7	0.0	2.6	2	0	0	2	2	2	2	GDP	dissociation	inhibitor
Lycopene_cycl	PF05834.7	gi|479324768|ref|YP_007864817.1|	-	0.0018	17.2	0.0	0.026	13.4	0.0	2.1	2	0	0	2	2	2	1	Lycopene	cyclase	protein
2-Hacid_dh_C	PF02826.14	gi|479324768|ref|YP_007864817.1|	-	0.02	14.0	0.4	0.33	10.1	0.0	2.3	2	0	0	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
UDPG_MGDP_dh_N	PF03721.9	gi|479324768|ref|YP_007864817.1|	-	0.023	14.0	0.1	0.055	12.8	0.1	1.6	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
NAD_binding_9	PF13454.1	gi|479324768|ref|YP_007864817.1|	-	0.05	13.3	0.2	8.4	6.1	0.0	2.3	2	0	0	2	2	2	0	FAD-NAD(P)-binding
DUF488	PF04343.8	gi|479324769|ref|YP_007864818.1|	-	2.9e-29	101.9	0.0	3.9e-29	101.4	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF488
Pyr_redox	PF00070.22	gi|479324769|ref|YP_007864818.1|	-	0.077	13.4	0.1	0.75	10.2	0.0	2.5	2	1	0	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
Amidohydro_2	PF04909.9	gi|479324770|ref|YP_007864819.1|	-	9.5e-53	179.4	0.1	1.2e-52	179.2	0.1	1.1	1	0	0	1	1	1	1	Amidohydrolase
CHAD	PF05235.9	gi|479324771|ref|YP_007864820.1|	-	2.6e-07	30.4	0.0	0.015	14.8	0.0	2.2	1	1	1	2	2	2	2	CHAD	domain
Thymidylate_kin	PF02223.12	gi|479324772|ref|YP_007864821.1|	-	9.5e-14	51.1	0.0	1.4e-13	50.6	0.0	1.2	1	0	0	1	1	1	1	Thymidylate	kinase
AAA_30	PF13604.1	gi|479324772|ref|YP_007864821.1|	-	0.0053	16.3	0.0	0.0079	15.7	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|479324772|ref|YP_007864821.1|	-	0.0098	16.2	0.4	0.031	14.5	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
MobB	PF03205.9	gi|479324772|ref|YP_007864821.1|	-	0.017	14.8	0.0	0.032	13.9	0.0	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_17	PF13207.1	gi|479324772|ref|YP_007864821.1|	-	0.036	14.8	2.0	0.79	10.5	1.4	2.3	1	1	0	1	1	1	0	AAA	domain
Thymidylate_kin	PF02223.12	gi|479324773|ref|YP_007864822.1|	-	3.3e-29	101.6	0.0	1e-28	99.9	0.0	1.7	1	1	0	1	1	1	1	Thymidylate	kinase
AAA_18	PF13238.1	gi|479324773|ref|YP_007864822.1|	-	5e-05	23.6	0.0	0.00019	21.7	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
dNK	PF01712.14	gi|479324773|ref|YP_007864822.1|	-	0.00055	19.8	0.3	0.00091	19.1	0.2	1.5	1	1	0	1	1	1	1	Deoxynucleoside	kinase
AAA_33	PF13671.1	gi|479324773|ref|YP_007864822.1|	-	0.058	13.2	0.0	0.098	12.5	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Ppx-GppA	PF02541.11	gi|479324774|ref|YP_007864823.1|	-	2.9e-38	131.6	0.5	4.3e-38	131.1	0.4	1.2	1	0	0	1	1	1	1	Ppx/GppA	phosphatase	family
FtsA	PF14450.1	gi|479324774|ref|YP_007864823.1|	-	0.07	12.9	0.1	0.07	12.9	0.0	2.2	2	1	0	2	2	2	0	Cell	division	protein	FtsA
His_Phos_1	PF00300.17	gi|479324775|ref|YP_007864824.1|	-	8.5e-15	55.1	0.0	2.4e-13	50.4	0.0	2.0	1	1	1	2	2	2	2	Histidine	phosphatase	superfamily	(branch	1)
TPP_enzyme_C	PF02775.16	gi|479324776|ref|YP_007864825.1|	-	4.2e-19	68.6	0.0	8.1e-19	67.6	0.0	1.4	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
DXP_synthase_N	PF13292.1	gi|479324776|ref|YP_007864825.1|	-	0.0074	15.2	0.0	0.014	14.3	0.0	1.4	2	0	0	2	2	2	1	1-deoxy-D-xylulose-5-phosphate	synthase
E1_dh	PF00676.15	gi|479324776|ref|YP_007864825.1|	-	0.048	12.3	0.0	0.048	12.3	0.0	1.7	2	0	0	2	2	2	0	Dehydrogenase	E1	component
POR_N	PF01855.14	gi|479324777|ref|YP_007864826.1|	-	1.3e-70	237.5	1.7	1.7e-70	237.1	1.2	1.1	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Transketolase_C	PF02780.15	gi|479324777|ref|YP_007864826.1|	-	4.8e-06	26.5	0.0	1.2e-05	25.2	0.0	1.6	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
TPP_enzyme_N	PF02776.13	gi|479324777|ref|YP_007864826.1|	-	0.035	13.5	0.3	0.07	12.6	0.2	1.5	1	0	0	1	1	1	0	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
Fer4	PF00037.22	gi|479324778|ref|YP_007864827.1|	-	5.1e-15	54.3	17.2	6.9e-08	31.7	3.7	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|479324778|ref|YP_007864827.1|	-	1.7e-12	46.9	22.3	2.9e-09	36.5	8.3	1.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|479324778|ref|YP_007864827.1|	-	1e-11	44.1	15.6	4e-06	26.4	2.5	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|479324778|ref|YP_007864827.1|	-	3.8e-11	42.2	13.5	4.4e-06	26.3	2.2	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|479324778|ref|YP_007864827.1|	-	6.5e-11	42.4	9.8	9.7e-11	41.8	6.8	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|479324778|ref|YP_007864827.1|	-	5.3e-10	38.9	10.1	9.7e-10	38.1	7.0	1.4	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|479324778|ref|YP_007864827.1|	-	9.5e-09	35.8	6.6	0.00036	21.2	1.5	2.2	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_9	PF13187.1	gi|479324778|ref|YP_007864827.1|	-	1.4e-08	34.8	11.3	2e-08	34.3	7.8	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|479324778|ref|YP_007864827.1|	-	4.5e-07	29.6	13.5	0.0015	18.6	2.2	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|479324778|ref|YP_007864827.1|	-	6.7e-07	29.2	6.2	0.0044	17.0	0.2	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|479324778|ref|YP_007864827.1|	-	2.3e-05	24.8	8.3	0.012	16.1	0.9	2.1	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_17	PF13534.1	gi|479324778|ref|YP_007864827.1|	-	0.00018	21.8	12.3	0.0064	16.8	1.3	2.1	1	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|479324778|ref|YP_007864827.1|	-	0.00053	20.3	10.9	0.05	14.0	1.1	2.1	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_3	PF12798.2	gi|479324778|ref|YP_007864827.1|	-	0.0044	17.4	19.2	0.13	12.9	2.2	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|479324778|ref|YP_007864827.1|	-	0.0065	16.8	14.2	0.076	13.4	2.7	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
POR	PF01558.13	gi|479324779|ref|YP_007864828.1|	-	6.9e-37	126.9	0.0	8.2e-37	126.7	0.0	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
Ald_Xan_dh_C	PF01315.17	gi|479324780|ref|YP_007864829.1|	-	6.9e-05	22.8	0.0	7.6e-05	22.7	0.0	1.1	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
FliD_C	PF07195.7	gi|479324781|ref|YP_007864830.1|	-	6.4e-06	25.6	1.8	6.9e-06	25.5	1.2	1.0	1	0	0	1	1	1	1	Flagellar	hook-associated	protein	2	C-terminus
Zwint	PF15556.1	gi|479324781|ref|YP_007864830.1|	-	0.00081	18.7	2.9	0.00095	18.4	2.0	1.0	1	0	0	1	1	1	1	ZW10	interactor
IFT57	PF10498.4	gi|479324781|ref|YP_007864830.1|	-	0.0017	17.2	2.7	0.0017	17.2	1.9	1.1	1	0	0	1	1	1	1	Intra-flagellar	transport	protein	57
Prefoldin	PF02996.12	gi|479324781|ref|YP_007864830.1|	-	0.0019	17.8	5.5	0.0019	17.8	3.8	1.7	2	0	0	2	2	1	1	Prefoldin	subunit
FH2	PF02181.18	gi|479324781|ref|YP_007864830.1|	-	0.0029	16.5	3.6	0.003	16.4	2.5	1.1	1	0	0	1	1	1	1	Formin	Homology	2	Domain
AAA_13	PF13166.1	gi|479324781|ref|YP_007864830.1|	-	0.0039	15.7	5.1	0.0041	15.6	3.5	1.0	1	0	0	1	1	1	1	AAA	domain
AATF-Che1	PF13339.1	gi|479324781|ref|YP_007864830.1|	-	0.0041	17.2	2.6	0.0058	16.7	1.8	1.3	1	0	0	1	1	1	1	Apoptosis	antagonizing	transcription	factor
DUF16	PF01519.11	gi|479324781|ref|YP_007864830.1|	-	0.0059	16.8	7.8	0.009	16.2	5.2	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	DUF16
V_ATPase_I	PF01496.14	gi|479324781|ref|YP_007864830.1|	-	0.0059	14.5	1.8	0.0059	14.5	1.3	1.0	1	0	0	1	1	1	1	V-type	ATPase	116kDa	subunit	family
IncA	PF04156.9	gi|479324781|ref|YP_007864830.1|	-	0.007	15.9	7.7	0.0085	15.7	5.3	1.2	1	0	0	1	1	1	1	IncA	protein
Prefoldin_2	PF01920.15	gi|479324781|ref|YP_007864830.1|	-	0.0074	16.0	13.2	0.0095	15.6	9.2	1.4	1	1	0	1	1	1	1	Prefoldin	subunit
Baculo_PEP_C	PF04513.7	gi|479324781|ref|YP_007864830.1|	-	0.0091	15.8	1.2	0.015	15.1	0.6	1.5	1	1	0	1	1	1	1	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Borrelia_P83	PF05262.6	gi|479324781|ref|YP_007864830.1|	-	0.0095	14.2	2.1	0.0092	14.2	1.4	1.1	1	0	0	1	1	1	1	Borrelia	P83/100	protein
Tektin	PF03148.9	gi|479324781|ref|YP_007864830.1|	-	0.013	14.0	4.5	0.014	13.9	3.1	1.1	1	0	0	1	1	1	0	Tektin	family
Sec8_exocyst	PF04048.9	gi|479324781|ref|YP_007864830.1|	-	0.014	15.0	2.3	0.016	14.8	1.6	1.2	1	0	0	1	1	1	0	Sec8	exocyst	complex	component	specific	domain
DUF948	PF06103.6	gi|479324781|ref|YP_007864830.1|	-	0.015	15.1	2.4	0.025	14.4	1.6	1.3	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF948)
DUF2120	PF09893.4	gi|479324781|ref|YP_007864830.1|	-	0.017	15.0	4.1	0.02	14.8	2.9	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2120)
Gemin6	PF06372.7	gi|479324781|ref|YP_007864830.1|	-	0.018	14.3	0.6	0.02	14.2	0.4	1.1	1	0	0	1	1	1	0	Gemin6	protein
Atg14	PF10186.4	gi|479324781|ref|YP_007864830.1|	-	0.018	13.9	1.6	0.018	14.0	1.1	1.1	1	0	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
EzrA	PF06160.7	gi|479324781|ref|YP_007864830.1|	-	0.021	13.0	6.1	0.024	12.8	4.2	1.1	1	0	0	1	1	1	0	Septation	ring	formation	regulator,	EzrA
MutS_IV	PF05190.13	gi|479324781|ref|YP_007864830.1|	-	0.024	14.7	4.3	0.024	14.7	3.0	2.4	1	1	2	3	3	2	0	MutS	family	domain	IV
MCLC	PF05934.6	gi|479324781|ref|YP_007864830.1|	-	0.025	12.8	1.2	0.023	13.0	0.8	1.0	1	0	0	1	1	1	0	Mid-1-related	chloride	channel	(MCLC)
AAA_32	PF13654.1	gi|479324781|ref|YP_007864830.1|	-	0.026	13.2	2.8	0.027	13.1	2.0	1.2	1	0	0	1	1	1	0	AAA	domain
Glyco_hydro_4C	PF11975.3	gi|479324781|ref|YP_007864830.1|	-	0.026	14.2	1.5	0.028	14.2	1.1	1.1	1	0	0	1	1	1	0	Family	4	glycosyl	hydrolase	C-terminal	domain
Laminin_II	PF06009.7	gi|479324781|ref|YP_007864830.1|	-	0.027	14.2	1.4	0.042	13.6	0.9	1.4	1	0	0	1	1	1	0	Laminin	Domain	II
Syntaxin_2	PF14523.1	gi|479324781|ref|YP_007864830.1|	-	0.027	14.5	3.2	0.047	13.7	2.2	1.4	1	0	0	1	1	1	0	Syntaxin-like	protein
STAT_alpha	PF01017.15	gi|479324781|ref|YP_007864830.1|	-	0.029	14.0	2.8	0.036	13.7	2.0	1.2	1	0	0	1	1	1	0	STAT	protein,	all-alpha	domain
Transposase_22	PF02994.9	gi|479324781|ref|YP_007864830.1|	-	0.037	12.5	8.8	0.041	12.3	6.1	1.1	1	0	0	1	1	1	0	L1	transposable	element
HisKA_3	PF07730.8	gi|479324781|ref|YP_007864830.1|	-	0.041	14.2	0.1	0.098	13.0	0.0	1.7	1	1	1	2	2	2	0	Histidine	kinase
NTP_transf_4	PF13562.1	gi|479324781|ref|YP_007864830.1|	-	0.042	13.5	2.2	0.089	12.4	1.5	1.5	1	1	0	1	1	1	0	Sugar	nucleotidyl	transferase
Bacillus_HBL	PF05791.6	gi|479324781|ref|YP_007864830.1|	-	0.044	13.1	2.4	0.059	12.7	1.7	1.2	1	0	0	1	1	1	0	Bacillus	haemolytic	enterotoxin	(HBL)
DUF2031	PF09592.5	gi|479324781|ref|YP_007864830.1|	-	0.046	12.8	7.4	0.051	12.7	5.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2031)
HR1	PF02185.11	gi|479324781|ref|YP_007864830.1|	-	0.05	13.3	5.8	0.11	12.2	4.0	1.7	1	1	0	1	1	1	0	Hr1	repeat
Rootletin	PF15035.1	gi|479324781|ref|YP_007864830.1|	-	0.053	13.5	4.5	0.06	13.3	3.1	1.2	1	0	0	1	1	1	0	Ciliary	rootlet	component,	centrosome	cohesion
ApoLp-III	PF07464.6	gi|479324781|ref|YP_007864830.1|	-	0.058	13.4	6.8	0.054	13.5	3.8	1.5	1	1	0	1	1	1	0	Apolipophorin-III	precursor	(apoLp-III)
Cortex-I_coil	PF09304.5	gi|479324781|ref|YP_007864830.1|	-	0.058	13.4	10.6	0.085	12.8	7.3	1.3	1	1	0	1	1	1	0	Cortexillin	I,	coiled	coil
Syntaxin-6_N	PF09177.6	gi|479324781|ref|YP_007864830.1|	-	0.066	13.6	5.1	0.53	10.7	3.0	2.1	1	1	1	2	2	2	0	Syntaxin	6,	N-terminal
TMPIT	PF07851.8	gi|479324781|ref|YP_007864830.1|	-	0.068	12.2	1.5	0.063	12.3	1.0	1.1	1	0	0	1	1	1	0	TMPIT-like	protein
DUF607	PF04678.8	gi|479324781|ref|YP_007864830.1|	-	0.069	13.0	1.4	0.074	12.9	1.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF607
GBP_C	PF02841.9	gi|479324781|ref|YP_007864830.1|	-	0.073	12.2	6.1	0.079	12.1	4.3	1.0	1	0	0	1	1	1	0	Guanylate-binding	protein,	C-terminal	domain
Hemagglutinin	PF00509.13	gi|479324781|ref|YP_007864830.1|	-	0.08	11.0	2.6	0.085	10.9	1.8	1.1	1	0	0	1	1	1	0	Haemagglutinin
TFIIA_gamma_N	PF02268.11	gi|479324781|ref|YP_007864830.1|	-	0.088	12.4	2.4	6.2	6.4	0.0	3.1	3	0	0	3	3	3	0	Transcription	initiation	factor	IIA,	gamma	subunit,	helical	domain
TMP_2	PF06791.8	gi|479324781|ref|YP_007864830.1|	-	0.098	12.2	0.3	0.13	11.9	0.2	1.1	1	0	0	1	1	1	0	Prophage	tail	length	tape	measure	protein
APG6	PF04111.7	gi|479324781|ref|YP_007864830.1|	-	0.11	11.5	7.7	0.12	11.4	5.3	1.1	1	0	0	1	1	1	0	Autophagy	protein	Apg6
DUF4259	PF14078.1	gi|479324781|ref|YP_007864830.1|	-	0.11	12.9	4.7	0.18	12.2	3.2	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4259)
DUF4071	PF13281.1	gi|479324781|ref|YP_007864830.1|	-	0.11	11.2	2.7	0.13	11.1	1.9	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4071)
PilJ	PF13675.1	gi|479324781|ref|YP_007864830.1|	-	0.12	12.7	0.1	0.2	12.0	0.1	1.5	1	1	0	1	1	1	0	Type	IV	pili	methyl-accepting	chemotaxis	transducer	N-term
DUF148	PF02520.12	gi|479324781|ref|YP_007864830.1|	-	0.12	12.2	3.1	0.16	11.7	2.2	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF148
CENP-Q	PF13094.1	gi|479324781|ref|YP_007864830.1|	-	0.12	12.3	6.6	0.15	12.1	4.6	1.2	1	0	0	1	1	1	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
CDC37_N	PF03234.9	gi|479324781|ref|YP_007864830.1|	-	0.12	12.6	6.1	0.15	12.3	4.3	1.2	1	0	0	1	1	1	0	Cdc37	N	terminal	kinase	binding
Phage_GPO	PF05929.6	gi|479324781|ref|YP_007864830.1|	-	0.12	11.5	3.1	0.16	11.1	2.1	1.3	1	1	0	1	1	1	0	Phage	capsid	scaffolding	protein	(GPO)	serine	peptidase
RmuC	PF02646.11	gi|479324781|ref|YP_007864830.1|	-	0.13	11.0	4.5	0.26	10.0	2.4	1.6	1	1	0	2	2	2	0	RmuC	family
FemAB	PF02388.11	gi|479324781|ref|YP_007864830.1|	-	0.13	10.8	3.8	0.15	10.7	2.6	1.1	1	0	0	1	1	1	0	FemAB	family
Glyco_hydro_52	PF03512.8	gi|479324781|ref|YP_007864830.1|	-	0.14	10.7	0.4	0.16	10.5	0.3	1.0	1	0	0	1	1	1	0	Glycosyl	hydrolase	family	52
KfrA_N	PF11740.3	gi|479324781|ref|YP_007864830.1|	-	0.15	12.5	3.8	0.26	11.7	2.6	1.6	1	1	0	1	1	1	0	Plasmid	replication	region	DNA-binding	N-term
DUF3482	PF11981.3	gi|479324781|ref|YP_007864830.1|	-	0.2	10.8	1.3	0.25	10.5	0.9	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3482)
Spc7	PF08317.6	gi|479324781|ref|YP_007864830.1|	-	0.2	10.2	8.9	0.21	10.2	6.2	1.0	1	0	0	1	1	1	0	Spc7	kinetochore	protein
ArsC	PF03960.10	gi|479324781|ref|YP_007864830.1|	-	0.2	11.7	5.4	0.22	11.6	3.2	1.5	1	1	1	2	2	1	0	ArsC	family
DUF2203	PF09969.4	gi|479324781|ref|YP_007864830.1|	-	0.23	11.6	3.3	0.29	11.3	2.1	1.3	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2203)
CR6_interact	PF10147.4	gi|479324781|ref|YP_007864830.1|	-	0.24	10.7	7.5	0.28	10.4	5.2	1.1	1	0	0	1	1	1	0	Growth	arrest	and	DNA-damage-inducible	proteins-interacting	protein	1
DUF848	PF05852.6	gi|479324781|ref|YP_007864830.1|	-	0.27	11.0	5.8	0.35	10.6	4.1	1.3	1	0	0	1	1	1	0	Gammaherpesvirus	protein	of	unknown	function	(DUF848)
ACCA	PF03255.9	gi|479324781|ref|YP_007864830.1|	-	0.28	10.7	7.0	0.31	10.5	4.2	1.6	1	1	0	1	1	1	0	Acetyl	co-enzyme	A	carboxylase	carboxyltransferase	alpha	subunit
DUF4191	PF13829.1	gi|479324781|ref|YP_007864830.1|	-	0.31	10.1	1.8	0.4	9.7	1.2	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4191)
OmpH	PF03938.9	gi|479324781|ref|YP_007864830.1|	-	0.31	10.9	5.6	0.3	11.0	3.3	1.4	1	1	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
DUF1664	PF07889.7	gi|479324781|ref|YP_007864830.1|	-	0.31	10.8	4.7	0.42	10.4	2.9	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
Phasin	PF05597.6	gi|479324781|ref|YP_007864830.1|	-	0.31	10.7	6.8	0.38	10.5	4.6	1.3	1	1	0	1	1	1	0	Poly(hydroxyalcanoate)	granule	associated	protein	(phasin)
PCRF	PF03462.13	gi|479324781|ref|YP_007864830.1|	-	0.32	10.7	4.0	0.57	9.8	2.8	1.4	1	0	0	1	1	1	0	PCRF	domain
UPF0449	PF15136.1	gi|479324781|ref|YP_007864830.1|	-	0.35	11.1	6.2	0.21	11.7	2.2	2.0	1	1	0	1	1	1	0	Uncharacterised	protein	family	UPF0449
Sec2p	PF06428.6	gi|479324781|ref|YP_007864830.1|	-	0.39	10.5	9.8	0.43	10.4	6.1	1.5	1	1	0	1	1	1	0	GDP/GTP	exchange	factor	Sec2p
PIN_2	PF10130.4	gi|479324781|ref|YP_007864830.1|	-	0.4	10.7	3.6	0.55	10.2	2.2	1.4	1	1	0	1	1	1	0	PIN	domain
DUF3552	PF12072.3	gi|479324781|ref|YP_007864830.1|	-	0.43	9.7	9.7	0.64	9.1	6.7	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3552)
MtrG	PF04210.8	gi|479324781|ref|YP_007864830.1|	-	0.51	10.0	7.0	2.9	7.6	1.3	2.6	1	1	1	2	2	2	0	Tetrahydromethanopterin	S-methyltransferase,	subunit	G
V-SNARE	PF05008.10	gi|479324781|ref|YP_007864830.1|	-	0.53	10.4	7.8	1.9	8.7	2.4	2.5	1	1	1	2	2	2	0	Vesicle	transport	v-SNARE	protein	N-terminus
DUF2479	PF10651.4	gi|479324781|ref|YP_007864830.1|	-	0.55	9.7	5.9	0.29	10.6	0.6	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF2479)
CHD5	PF04420.9	gi|479324781|ref|YP_007864830.1|	-	0.56	9.8	5.1	0.47	10.1	2.1	1.8	1	1	1	2	2	2	0	CHD5-like	protein
Phage_GP20	PF06810.6	gi|479324781|ref|YP_007864830.1|	-	0.61	9.5	13.2	0.62	9.4	8.7	1.3	1	1	0	1	1	1	0	Phage	minor	structural	protein	GP20
GST_C_3	PF14497.1	gi|479324781|ref|YP_007864830.1|	-	0.76	10.2	2.4	40	4.7	0.9	2.5	1	1	1	2	2	2	0	Glutathione	S-transferase,	C-terminal	domain
DUF4094	PF13334.1	gi|479324781|ref|YP_007864830.1|	-	0.82	10.0	3.9	1.4	9.3	2.7	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4094)
DUF883	PF05957.8	gi|479324781|ref|YP_007864830.1|	-	1.1	9.6	3.4	1.5	9.2	1.3	1.9	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF883)
MCM_N	PF14551.1	gi|479324781|ref|YP_007864830.1|	-	1.3	9.5	3.8	2.2	8.7	2.7	1.5	1	1	0	1	1	1	0	MCM	N-terminal	domain
NPV_P10	PF05531.7	gi|479324781|ref|YP_007864830.1|	-	1.6	8.9	5.6	1.7	8.9	2.5	2.1	2	1	0	2	2	1	0	Nucleopolyhedrovirus	P10	protein
DUF342	PF03961.8	gi|479324781|ref|YP_007864830.1|	-	1.7	6.9	8.6	3.2	6.0	6.0	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
CorA	PF01544.13	gi|479324781|ref|YP_007864830.1|	-	1.8	7.5	6.3	6.4	5.7	4.2	1.8	1	1	0	1	1	1	0	CorA-like	Mg2+	transporter	protein
Bap31	PF05529.7	gi|479324781|ref|YP_007864830.1|	-	1.9	7.9	6.7	2.3	7.6	4.6	1.1	1	0	0	1	1	1	0	B-cell	receptor-associated	protein	31-like
Snapin_Pallidin	PF14712.1	gi|479324781|ref|YP_007864830.1|	-	2.1	8.7	8.1	2.3	8.5	4.3	1.9	1	1	1	2	2	2	0	Snapin/Pallidin
Nsp1_C	PF05064.8	gi|479324781|ref|YP_007864830.1|	-	2.1	7.9	8.4	5.2	6.7	5.8	1.7	1	1	0	1	1	1	0	Nsp1-like	C-terminal	region
RBD-FIP	PF09457.5	gi|479324781|ref|YP_007864830.1|	-	2.2	8.1	13.0	0.94	9.3	6.3	2.5	1	1	1	2	2	2	0	FIP	domain
DUF603	PF04645.7	gi|479324781|ref|YP_007864830.1|	-	2.5	8.0	10.1	3.7	7.4	6.1	1.6	1	1	1	2	2	2	0	Protein	of	unknown	function,	DUF603
Ribosomal_L29	PF00831.18	gi|479324781|ref|YP_007864830.1|	-	2.8	7.6	13.7	0.74	9.5	6.2	2.4	1	1	1	2	2	2	0	Ribosomal	L29	protein
FlxA	PF14282.1	gi|479324781|ref|YP_007864830.1|	-	3.1	7.7	5.6	16	5.4	2.6	2.1	1	1	1	2	2	2	0	FlxA-like	protein
GrpE	PF01025.14	gi|479324781|ref|YP_007864830.1|	-	3.4	7.1	10.8	4	6.9	6.2	1.8	1	1	1	2	2	2	0	GrpE
Med4	PF10018.4	gi|479324781|ref|YP_007864830.1|	-	3.5	6.9	8.9	9.4	5.5	6.2	1.5	1	1	0	1	1	1	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
Med21	PF11221.3	gi|479324781|ref|YP_007864830.1|	-	3.7	7.4	10.2	3.7	7.5	5.7	2.0	1	1	1	2	2	2	0	Subunit	21	of	Mediator	complex
AAA_23	PF13476.1	gi|479324781|ref|YP_007864830.1|	-	4.7	7.4	11.1	6.1	7.1	7.7	1.2	1	0	0	1	1	1	0	AAA	domain
DUF4208	PF13907.1	gi|479324781|ref|YP_007864830.1|	-	4.8	7.4	8.8	8.9	6.6	5.2	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4208)
Lge1	PF11488.3	gi|479324781|ref|YP_007864830.1|	-	4.9	7.4	7.9	9.1	6.5	5.5	1.5	1	1	0	1	1	1	0	Transcriptional	regulatory	protein	LGE1
HSCB_C	PF07743.8	gi|479324781|ref|YP_007864830.1|	-	6.5	7.2	11.5	10	6.6	6.5	2.4	1	1	1	2	2	2	0	HSCB	C-terminal	oligomerisation	domain
UPF0278	PF08745.6	gi|479324783|ref|YP_007864832.1|	-	0.017	14.3	0.1	0.019	14.1	0.0	1.2	1	0	0	1	1	1	0	UPF0278	family
GSIII_N	PF12437.3	gi|479324783|ref|YP_007864832.1|	-	0.071	12.5	0.0	0.074	12.4	0.0	1.3	1	0	0	1	1	1	0	Glutamine	synthetase	type	III	N	terminal
DUF1344	PF07076.6	gi|479324783|ref|YP_007864832.1|	-	0.096	12.2	0.2	0.51	9.9	0.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1344)
PIN	PF01850.16	gi|479324784|ref|YP_007864833.1|	-	2.8e-11	43.8	0.1	3.6e-11	43.4	0.0	1.1	1	0	0	1	1	1	1	PIN	domain
DUF217	PF02697.9	gi|479324785|ref|YP_007864834.1|	-	1.9e-20	72.8	2.9	2.1e-20	72.7	2.0	1.0	1	0	0	1	1	1	1	Uncharacterized	ACR,	COG1753
DUF104	PF01954.11	gi|479324785|ref|YP_007864834.1|	-	0.036	14.1	1.2	0.072	13.1	0.5	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	DUF104
DUF1028	PF06267.7	gi|479324786|ref|YP_007864835.1|	-	9.1e-70	233.9	0.0	1.3e-69	233.5	0.0	1.2	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF1028)
PG_binding_2	PF08823.6	gi|479324786|ref|YP_007864835.1|	-	1.2e-12	47.7	1.6	1.6e-12	47.3	0.3	1.9	2	0	0	2	2	2	1	Putative	peptidoglycan	binding	domain
DUF608	PF04685.8	gi|479324790|ref|YP_007864839.1|	-	4.5e-80	269.1	0.0	7e-80	268.4	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF608
GBA2_N	PF12215.3	gi|479324790|ref|YP_007864839.1|	-	4.1e-61	206.7	0.1	5.7e-61	206.2	0.1	1.2	1	0	0	1	1	1	1	beta-Glucocerebrosidase	2	N	terminal
Bac_rhamnosid	PF05592.6	gi|479324790|ref|YP_007864839.1|	-	2.8e-06	25.8	0.0	0.0012	17.2	0.0	2.1	1	1	0	2	2	2	2	Bacterial	alpha-L-rhamnosidase
Glyco_hydro_52	PF03512.8	gi|479324790|ref|YP_007864839.1|	-	0.044	12.3	0.0	0.07	11.7	0.0	1.2	1	0	0	1	1	1	0	Glycosyl	hydrolase	family	52
GDE_C	PF06202.9	gi|479324790|ref|YP_007864839.1|	-	0.051	12.2	0.3	0.6	8.7	0.2	2.5	1	1	0	1	1	1	0	Amylo-alpha-1,6-glucosidase
Glyco_hydro_12	PF01670.11	gi|479324791|ref|YP_007864840.1|	-	3.7e-15	56.0	3.4	3.7e-15	56.0	2.4	1.9	2	0	0	2	2	2	1	Glycosyl	hydrolase	family	12
TadE	PF07811.7	gi|479324791|ref|YP_007864840.1|	-	0.12	12.2	0.6	0.24	11.3	0.4	1.5	1	0	0	1	1	1	0	TadE-like	protein
Peptidase_M20	PF01546.23	gi|479324793|ref|YP_007864842.1|	-	1.2e-30	106.4	0.1	1.5e-30	106.1	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|479324793|ref|YP_007864842.1|	-	1.9e-13	50.1	0.0	8.6e-13	48.0	0.0	1.9	2	0	0	2	2	2	1	Peptidase	dimerisation	domain
HEAT_2	PF13646.1	gi|479324794|ref|YP_007864843.1|	-	0.0051	17.0	0.0	0.031	14.5	0.0	2.2	1	1	1	2	2	2	2	HEAT	repeats
Mitovir_RNA_pol	PF05919.6	gi|479324794|ref|YP_007864843.1|	-	0.017	14.0	0.1	0.021	13.7	0.1	1.0	1	0	0	1	1	1	0	Mitovirus	RNA-dependent	RNA	polymerase
HEAT	PF02985.17	gi|479324794|ref|YP_007864843.1|	-	0.043	13.8	1.0	7.9	6.8	0.0	3.3	4	0	0	4	4	4	0	HEAT	repeat
Glycos_transf_2	PF00535.21	gi|479324795|ref|YP_007864844.1|	-	7.7e-20	71.2	0.0	1.3e-19	70.5	0.0	1.3	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|479324795|ref|YP_007864844.1|	-	1.8e-07	31.2	0.0	4e-07	30.0	0.0	1.5	2	0	0	2	2	2	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.4	gi|479324795|ref|YP_007864844.1|	-	3.5e-06	26.2	0.4	1.3e-05	24.4	0.3	1.9	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Flp_Fap	PF04964.9	gi|479324797|ref|YP_007864846.1|	-	0.027	14.0	2.3	0.057	13.0	1.6	1.6	1	0	0	1	1	1	0	Flp/Fap	pilin	component
DUF2659	PF10858.3	gi|479324797|ref|YP_007864846.1|	-	1.5	8.2	8.0	0.33	10.3	3.1	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2659)
MFS_1	PF07690.11	gi|479324798|ref|YP_007864847.1|	-	6.8e-30	103.9	40.9	6.8e-30	103.9	28.3	1.4	1	1	0	1	1	1	1	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|479324798|ref|YP_007864847.1|	-	0.0098	14.0	7.9	0.011	13.9	0.1	2.9	2	1	1	3	3	3	2	Transmembrane	secretion	effector
DUF1228	PF06779.9	gi|479324798|ref|YP_007864847.1|	-	0.026	14.5	8.1	0.49	10.4	0.3	3.3	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF1228)
HAUS2	PF15003.1	gi|479324799|ref|YP_007864848.1|	-	0.11	11.6	0.1	0.12	11.4	0.0	1.1	1	0	0	1	1	1	0	HAUS	augmin-like	complex	subunit	2
Band_7	PF01145.20	gi|479324800|ref|YP_007864849.1|	-	1.9e-22	80.0	0.9	3e-22	79.3	0.6	1.3	1	0	0	1	1	1	1	SPFH	domain	/	Band	7	family
Band_7_1	PF13421.1	gi|479324800|ref|YP_007864849.1|	-	7.6e-13	48.4	0.1	1.7e-12	47.3	0.1	1.5	1	1	0	1	1	1	1	SPFH	domain-Band	7	family
DUF4018	PF13210.1	gi|479324801|ref|YP_007864850.1|	-	0.064	12.6	2.6	0.083	12.2	1.8	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4018)
SNN_transmemb	PF09049.5	gi|479324801|ref|YP_007864850.1|	-	0.091	12.4	0.7	0.22	11.2	0.5	1.7	1	0	0	1	1	1	0	Stannin	transmembrane
LigB	PF02900.13	gi|479324804|ref|YP_007864853.1|	-	4.5e-06	25.8	0.0	5.4e-06	25.5	0.0	1.1	1	0	0	1	1	1	1	Catalytic	LigB	subunit	of	aromatic	ring-opening	dioxygenase
OrfB_Zn_ribbon	PF07282.6	gi|479327026|ref|YP_007864854.1|	-	1.4e-20	72.7	3.1	1.5e-20	72.5	0.2	2.5	3	0	0	3	3	3	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|479327026|ref|YP_007864854.1|	-	6.2e-08	32.3	0.3	1.1e-07	31.5	0.2	1.4	1	0	0	1	1	1	1	Probable	transposase
zf-RING_4	PF14570.1	gi|479327026|ref|YP_007864854.1|	-	0.1	12.2	3.3	0.075	12.6	1.1	1.6	2	0	0	2	2	2	0	RING/Ubox	like	zinc-binding	domain
DUF1975	PF09318.5	gi|479327026|ref|YP_007864854.1|	-	0.12	12.0	0.0	0.21	11.1	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1975)
AAA_14	PF13173.1	gi|479324805|ref|YP_007864855.1|	-	2.5e-08	33.8	0.0	3.6e-08	33.3	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|479324805|ref|YP_007864855.1|	-	0.00047	20.9	0.0	0.00072	20.3	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|479324805|ref|YP_007864855.1|	-	0.003	17.5	0.0	0.0037	17.2	0.0	1.1	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_18	PF13238.1	gi|479324805|ref|YP_007864855.1|	-	0.011	16.0	0.0	0.02	15.1	0.0	1.4	2	0	0	2	2	2	0	AAA	domain
Antitoxin-MazE	PF04014.13	gi|479324806|ref|YP_007864856.1|	-	9.3e-14	50.7	2.5	1.3e-13	50.3	1.5	1.5	1	1	0	1	1	1	1	Antidote-toxin	recognition	MazE
AbrB-like	PF14250.1	gi|479324806|ref|YP_007864856.1|	-	0.084	12.7	0.1	0.19	11.6	0.0	1.6	2	0	0	2	2	2	0	AbrB-like	transcriptional	regulator
PIN	PF01850.16	gi|479324807|ref|YP_007864857.1|	-	1.7e-16	60.6	0.1	1.9e-16	60.4	0.1	1.0	1	0	0	1	1	1	1	PIN	domain
Tmemb_55A	PF09788.4	gi|479324808|ref|YP_007864858.1|	-	0.036	13.1	1.0	0.043	12.9	0.7	1.0	1	0	0	1	1	1	0	Transmembrane	protein	55A
Tetraspannin	PF00335.15	gi|479324808|ref|YP_007864858.1|	-	0.056	12.7	2.6	0.066	12.4	1.8	1.1	1	0	0	1	1	1	0	Tetraspanin	family
MARVEL	PF01284.18	gi|479324808|ref|YP_007864858.1|	-	0.081	12.7	1.7	0.11	12.3	1.2	1.2	1	0	0	1	1	1	0	Membrane-associating	domain
LtrA	PF06772.6	gi|479324808|ref|YP_007864858.1|	-	0.53	9.1	4.6	0.78	8.5	3.2	1.3	1	1	0	1	1	1	0	Bacterial	low	temperature	requirement	A	protein	(LtrA)
DUF2276	PF10040.4	gi|479324809|ref|YP_007864859.1|	-	1.1e-23	83.7	0.0	1.9e-23	82.9	0.0	1.4	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2276)
DEAD	PF00270.24	gi|479324812|ref|YP_007864862.1|	-	1.3e-14	54.0	0.1	2.6e-13	49.8	0.0	2.4	2	1	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|479324812|ref|YP_007864862.1|	-	3.5e-07	29.9	0.0	9.5e-07	28.5	0.0	1.8	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|479324812|ref|YP_007864862.1|	-	9e-06	25.6	0.0	3.3e-05	23.7	0.0	1.9	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
AAA_19	PF13245.1	gi|479324812|ref|YP_007864862.1|	-	0.0072	16.0	0.0	0.031	14.0	0.0	2.0	2	0	0	2	2	2	1	Part	of	AAA	domain
RuvB_N	PF05496.7	gi|479324812|ref|YP_007864862.1|	-	0.014	14.4	0.0	0.028	13.4	0.0	1.5	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_22	PF13401.1	gi|479324812|ref|YP_007864862.1|	-	0.042	13.9	0.0	0.5	10.5	0.0	2.5	2	1	0	2	2	2	0	AAA	domain
Cas_Cas5d	PF09704.5	gi|479324813|ref|YP_007864863.1|	-	5.9e-20	71.8	0.0	6.9e-20	71.5	0.0	1.0	1	0	0	1	1	1	1	CRISPR-associated	protein	(Cas_Cas5)
DevR	PF01905.11	gi|479324814|ref|YP_007864864.1|	-	3.1e-76	255.7	0.0	3.7e-76	255.5	0.0	1.1	1	0	0	1	1	1	1	CRISPR-associated	negative	auto-regulator	DevR/Csa2
Cas_Csa5	PF09702.5	gi|479324815|ref|YP_007864865.1|	-	1.4e-48	163.3	0.2	2.5e-48	162.4	0.2	1.3	2	0	0	2	2	2	1	CRISPR-associated	protein	(Cas_Csa5)
Pox_C7_F8A	PF03287.9	gi|479324815|ref|YP_007864865.1|	-	0.066	12.9	0.2	0.077	12.7	0.1	1.2	1	0	0	1	1	1	0	Poxvirus	C7/F8A	protein
DUF1887	PF09002.6	gi|479324816|ref|YP_007864866.1|	-	2.5e-06	26.1	0.1	2.7e-06	26.0	0.1	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1887)
HTH_24	PF13412.1	gi|479324816|ref|YP_007864866.1|	-	6.5e-05	22.2	0.3	0.00011	21.4	0.2	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_45	PF14947.1	gi|479324816|ref|YP_007864866.1|	-	0.0034	17.1	1.2	0.021	14.6	0.5	2.2	2	0	0	2	2	2	1	Winged	helix-turn-helix
DUF2250	PF10007.4	gi|479324816|ref|YP_007864866.1|	-	0.008	16.0	0.2	0.019	14.8	0.1	1.7	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF3227	PF11537.3	gi|479324816|ref|YP_007864866.1|	-	0.093	12.8	0.2	1.2	9.2	0.0	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3227)
HTH_Mga	PF08280.6	gi|479324817|ref|YP_007864867.1|	-	2.5e-05	23.9	1.2	2.5e-05	23.9	0.8	2.3	2	1	0	2	2	2	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_11	PF08279.7	gi|479324817|ref|YP_007864867.1|	-	0.00056	19.5	0.1	0.0018	17.9	0.1	1.9	1	0	0	1	1	1	1	HTH	domain
HTH_24	PF13412.1	gi|479324817|ref|YP_007864867.1|	-	0.00088	18.6	0.3	0.0021	17.3	0.2	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_36	PF13730.1	gi|479324817|ref|YP_007864867.1|	-	0.0056	16.7	0.2	0.0056	16.7	0.1	1.8	2	0	0	2	2	2	1	Helix-turn-helix	domain
HrcA_DNA-bdg	PF03444.10	gi|479324817|ref|YP_007864867.1|	-	0.025	14.0	0.1	0.067	12.6	0.0	1.7	1	0	0	1	1	1	0	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
Mga	PF05043.8	gi|479324817|ref|YP_007864867.1|	-	0.034	14.4	2.7	0.046	13.9	0.9	1.9	2	0	0	2	2	2	0	Mga	helix-turn-helix	domain
HTH_5	PF01022.15	gi|479324817|ref|YP_007864867.1|	-	0.062	12.9	0.1	0.15	11.7	0.0	1.7	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
HTH_27	PF13463.1	gi|479324817|ref|YP_007864867.1|	-	0.088	13.1	0.0	0.19	12.0	0.0	1.6	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_Crp_2	PF13545.1	gi|479324817|ref|YP_007864867.1|	-	0.11	12.2	0.6	0.24	11.2	0.0	1.8	2	0	0	2	2	2	0	Crp-like	helix-turn-helix	domain
Cas_Cas4	PF01930.12	gi|479324818|ref|YP_007864868.1|	-	2.8e-19	69.6	0.0	3.2e-19	69.4	0.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF83
PDDEXK_1	PF12705.2	gi|479324818|ref|YP_007864868.1|	-	2.7e-10	40.0	0.0	1.4e-07	31.2	0.1	2.2	1	1	1	2	2	2	2	PD-(D/E)XK	nuclease	superfamily
CRISPR_Cas2	PF09827.4	gi|479324819|ref|YP_007864869.1|	-	5.1e-18	64.9	0.2	5.7e-18	64.8	0.2	1.0	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas2
Cas_Cas1	PF01867.11	gi|479324820|ref|YP_007864870.1|	-	3.7e-49	167.2	0.1	6.7e-49	166.4	0.0	1.4	1	1	0	1	1	1	1	CRISPR	associated	protein	Cas1
DUF911	PF06023.7	gi|479324821|ref|YP_007864871.1|	-	9.3e-100	333.5	0.0	1.3e-99	333.1	0.0	1.2	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF911)
PDDEXK_1	PF12705.2	gi|479324821|ref|YP_007864871.1|	-	5.5e-06	25.9	0.0	1.8e-05	24.2	0.0	1.7	1	1	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
YGGT	PF02325.12	gi|479324823|ref|YP_007864873.1|	-	0.0079	16.1	1.0	0.0079	16.1	0.7	1.9	2	0	0	2	2	2	1	YGGT	family
DUF3007	PF11460.3	gi|479324823|ref|YP_007864873.1|	-	0.06	13.4	0.2	0.06	13.4	0.1	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3007)
rRNA_methylase	PF06962.7	gi|479324824|ref|YP_007864874.1|	-	0.14	11.8	0.4	1	9.0	0.0	2.0	1	1	0	2	2	2	0	Putative	rRNA	methylase
OrfB_IS605	PF01385.14	gi|479324827|ref|YP_007864877.1|	-	1e-37	129.7	7.0	1.8e-37	128.9	4.8	1.3	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.6	gi|479324827|ref|YP_007864877.1|	-	1.5e-27	95.0	0.3	4.2e-27	93.5	0.2	1.8	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
HTH_OrfB_IS605	PF12323.3	gi|479324827|ref|YP_007864877.1|	-	2.1e-08	33.3	1.3	2.7e-08	32.9	0.1	1.8	2	0	0	2	2	2	1	Helix-turn-helix	domain
DUF3543	PF12063.3	gi|479324827|ref|YP_007864877.1|	-	0.013	14.6	4.2	0.33	10.1	0.3	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3543)
TF_Zn_Ribbon	PF08271.7	gi|479324827|ref|YP_007864877.1|	-	0.03	13.6	1.0	5.1	6.4	0.0	2.9	3	0	0	3	3	3	0	TFIIB	zinc-binding
DZR	PF12773.2	gi|479324827|ref|YP_007864877.1|	-	0.063	13.1	0.2	0.11	12.2	0.2	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|479324827|ref|YP_007864877.1|	-	0.1	11.8	2.9	2.9	7.2	3.0	2.2	1	1	1	2	2	2	0	zinc-ribbon	domain
UPF0547	PF10571.4	gi|479324827|ref|YP_007864877.1|	-	0.23	11.2	1.2	10	5.9	0.1	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zinc_ribbon_2	PF13240.1	gi|479324827|ref|YP_007864877.1|	-	0.28	10.7	0.9	14	5.3	0.1	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF1610	PF07754.6	gi|479324827|ref|YP_007864877.1|	-	0.92	9.6	3.3	0.49	10.5	0.1	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
Y1_Tnp	PF01797.11	gi|479324828|ref|YP_007864878.1|	-	3.1e-38	130.3	2.3	3.5e-38	130.1	1.6	1.0	1	0	0	1	1	1	1	Transposase	IS200	like
DUF1638	PF07796.6	gi|479324828|ref|YP_007864878.1|	-	0.079	12.5	0.1	0.12	12.0	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1638)
DUF836	PF05768.9	gi|479324828|ref|YP_007864878.1|	-	0.093	13.0	0.0	0.12	12.5	0.0	1.4	1	0	0	1	1	1	0	Glutaredoxin-like	domain	(DUF836)
MarR_2	PF12802.2	gi|479324829|ref|YP_007864879.1|	-	2e-12	46.6	0.2	6.1e-12	45.0	0.0	1.8	2	0	0	2	2	2	1	MarR	family
HTH_27	PF13463.1	gi|479324829|ref|YP_007864879.1|	-	2.4e-12	46.9	0.1	4.8e-12	46.0	0.1	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR	PF01047.17	gi|479324829|ref|YP_007864879.1|	-	4.2e-12	45.5	1.7	4.2e-12	45.5	0.0	1.9	3	0	0	3	3	1	1	MarR	family
HTH_20	PF12840.2	gi|479324829|ref|YP_007864879.1|	-	4.8e-05	23.0	0.0	0.0001	22.0	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|479324829|ref|YP_007864879.1|	-	7.8e-05	21.9	2.0	0.00014	21.1	0.0	2.6	4	0	0	4	4	4	1	Winged	helix-turn-helix	DNA-binding
Fe_dep_repress	PF01325.14	gi|479324829|ref|YP_007864879.1|	-	0.0002	21.1	0.7	0.00038	20.3	0.1	1.8	2	0	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_5	PF01022.15	gi|479324829|ref|YP_007864879.1|	-	0.00045	19.8	0.1	0.0027	17.3	0.0	2.2	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
TrmB	PF01978.14	gi|479324829|ref|YP_007864879.1|	-	0.0014	18.2	0.7	0.0045	16.6	0.2	2.2	1	1	1	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_34	PF13601.1	gi|479324829|ref|YP_007864879.1|	-	0.0039	17.1	0.3	0.0093	15.9	0.1	1.7	1	1	1	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_Crp_2	PF13545.1	gi|479324829|ref|YP_007864879.1|	-	0.0099	15.6	0.2	0.03	14.1	0.0	2.0	2	1	0	2	2	2	1	Crp-like	helix-turn-helix	domain
B-block_TFIIIC	PF04182.7	gi|479324829|ref|YP_007864879.1|	-	0.016	15.0	0.0	0.027	14.3	0.0	1.6	1	1	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
HTH_45	PF14947.1	gi|479324829|ref|YP_007864879.1|	-	0.017	14.9	0.1	0.038	13.8	0.1	1.6	1	0	0	1	1	1	0	Winged	helix-turn-helix
DUF4423	PF14394.1	gi|479324829|ref|YP_007864879.1|	-	0.028	13.9	0.8	0.22	11.0	0.1	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4423)
HTH_10	PF04967.7	gi|479324829|ref|YP_007864879.1|	-	0.03	13.9	0.1	0.32	10.6	0.0	2.6	2	0	0	2	2	2	0	HTH	DNA	binding	domain
GntR	PF00392.16	gi|479324829|ref|YP_007864879.1|	-	0.037	13.4	0.3	0.12	11.8	0.0	2.0	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
HTH_38	PF13936.1	gi|479324829|ref|YP_007864879.1|	-	0.045	13.3	2.2	0.42	10.1	0.0	3.1	3	0	0	3	3	3	0	Helix-turn-helix	domain
DUF1192	PF06698.6	gi|479324829|ref|YP_007864879.1|	-	0.049	13.4	0.7	6.3	6.6	0.3	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1192)
HTH_29	PF13551.1	gi|479324829|ref|YP_007864879.1|	-	0.054	13.6	0.0	0.089	12.9	0.0	1.4	1	0	0	1	1	1	0	Winged	helix-turn	helix
DUF2513	PF10711.4	gi|479324829|ref|YP_007864879.1|	-	0.077	13.0	0.3	0.84	9.7	0.0	2.0	1	1	1	2	2	2	0	Hypothetical	protein	(DUF2513)
Mrr_N	PF14338.1	gi|479324829|ref|YP_007864879.1|	-	0.086	12.9	0.1	0.19	11.8	0.0	1.6	2	0	0	2	2	1	0	Mrr	N-terminal	domain
HTH_1	PF00126.22	gi|479324829|ref|YP_007864879.1|	-	0.1	12.3	0.1	0.27	11.0	0.1	1.7	1	1	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
PaaX	PF07848.7	gi|479324829|ref|YP_007864879.1|	-	0.13	12.2	0.4	0.35	10.9	0.0	1.9	2	0	0	2	2	2	0	PaaX-like	protein
HTH_11	PF08279.7	gi|479324829|ref|YP_007864879.1|	-	0.27	10.9	2.1	0.7	9.5	0.1	2.5	2	1	0	2	2	2	0	HTH	domain
MFS_1	PF07690.11	gi|479324830|ref|YP_007864880.1|	-	1.4e-19	70.0	41.9	1.4e-19	70.0	29.1	3.4	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
PUCC	PF03209.10	gi|479324830|ref|YP_007864880.1|	-	0.0003	19.6	8.1	0.0003	19.6	5.6	1.9	2	0	0	2	2	2	1	PUCC	protein
DUF2583	PF10762.4	gi|479324830|ref|YP_007864880.1|	-	0.063	13.4	5.4	5.5	7.1	0.3	3.3	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2583)
Arch_ATPase	PF01637.13	gi|479324831|ref|YP_007864881.1|	-	1e-31	110.4	3.0	1e-31	110.4	2.1	1.6	2	0	0	2	2	2	1	Archaeal	ATPase
AAA_14	PF13173.1	gi|479324831|ref|YP_007864881.1|	-	1.6e-06	28.0	1.1	0.00015	21.6	0.7	2.6	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|479324831|ref|YP_007864881.1|	-	0.0049	17.0	0.1	0.027	14.6	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
CPT	PF07931.7	gi|479324831|ref|YP_007864881.1|	-	0.0073	15.9	0.0	0.011	15.3	0.0	1.3	1	0	0	1	1	1	1	Chloramphenicol	phosphotransferase-like	protein
AAA_16	PF13191.1	gi|479324831|ref|YP_007864881.1|	-	0.027	14.4	0.0	0.046	13.7	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
Nse4_C	PF08743.5	gi|479324831|ref|YP_007864881.1|	-	0.033	14.1	0.0	0.14	12.1	0.0	2.0	2	0	0	2	2	2	0	Nse4	C-terminal
AAA_18	PF13238.1	gi|479324831|ref|YP_007864881.1|	-	0.069	13.4	0.1	0.22	11.8	0.1	1.8	1	0	0	1	1	1	0	AAA	domain
SUKH_6	PF14568.1	gi|479324831|ref|YP_007864881.1|	-	0.088	13.2	2.1	0.11	12.9	0.1	2.3	2	2	0	2	2	2	0	SMI1-KNR4	cell-wall
Miro	PF08477.8	gi|479324831|ref|YP_007864881.1|	-	0.099	13.1	0.1	0.24	11.8	0.1	1.8	1	1	0	1	1	1	0	Miro-like	protein
FAD_binding_4	PF01565.18	gi|479324834|ref|YP_007864884.1|	-	1e-44	151.3	0.0	2.9e-44	149.9	0.0	1.8	2	0	0	2	2	2	1	FAD	binding	domain
FAD-oxidase_C	PF02913.14	gi|479324834|ref|YP_007864884.1|	-	9.2e-42	143.0	0.1	1.5e-41	142.3	0.1	1.3	1	0	0	1	1	1	1	FAD	linked	oxidases,	C-terminal	domain
Prismane	PF03063.15	gi|479324834|ref|YP_007864884.1|	-	0.055	11.8	0.0	6.9	4.9	0.0	2.3	2	0	0	2	2	2	0	Prismane/CO	dehydrogenase	family
L27	PF02828.11	gi|479324835|ref|YP_007864885.1|	-	0.081	12.6	0.0	0.12	12.0	0.0	1.2	1	0	0	1	1	1	0	L27	domain
YoqO	PF14037.1	gi|479324835|ref|YP_007864885.1|	-	0.1	12.7	0.2	0.12	12.4	0.1	1.2	1	0	0	1	1	1	0	YoqO-like	protein
DUF217	PF02697.9	gi|479324836|ref|YP_007864886.1|	-	2e-25	88.7	10.8	2.4e-25	88.5	7.5	1.1	1	0	0	1	1	1	1	Uncharacterized	ACR,	COG1753
Uds1	PF15456.1	gi|479324836|ref|YP_007864886.1|	-	0.028	14.4	1.6	0.035	14.1	0.6	1.5	1	1	0	1	1	1	0	Up-regulated	During	Septation
efThoc1	PF11957.3	gi|479324836|ref|YP_007864886.1|	-	0.031	12.7	0.9	0.034	12.6	0.6	1.0	1	0	0	1	1	1	0	THO	complex	subunit	1	transcription	elongation	factor
DUF3007	PF11460.3	gi|479324836|ref|YP_007864886.1|	-	0.043	13.9	0.6	0.056	13.5	0.4	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3007)
RHH_1	PF01402.16	gi|479324836|ref|YP_007864886.1|	-	0.089	12.7	4.5	5	7.1	1.1	2.6	2	1	0	2	2	2	0	Ribbon-helix-helix	protein,	copG	family
TRCF	PF03461.10	gi|479324836|ref|YP_007864886.1|	-	0.097	12.6	5.6	0.1	12.5	0.1	2.0	2	0	0	2	2	2	0	TRCF	domain
YflT	PF11181.3	gi|479324836|ref|YP_007864886.1|	-	0.11	12.6	0.7	0.14	12.3	0.5	1.2	1	0	0	1	1	1	0	Heat	induced	stress	protein	YflT
Phasin	PF05597.6	gi|479324836|ref|YP_007864886.1|	-	0.18	11.5	1.7	0.24	11.1	1.2	1.3	1	1	0	1	1	1	0	Poly(hydroxyalcanoate)	granule	associated	protein	(phasin)
NblA	PF04485.7	gi|479324836|ref|YP_007864886.1|	-	0.19	11.5	3.7	0.2	11.5	0.5	2.3	2	1	0	2	2	2	0	Phycobilisome	degradation	protein	nblA
DUF104	PF01954.11	gi|479324836|ref|YP_007864886.1|	-	0.29	11.1	8.2	0.57	10.2	0.9	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF104
TPR_10	PF13374.1	gi|479324836|ref|YP_007864886.1|	-	0.7	9.9	6.0	1.2	9.1	1.2	2.3	2	0	0	2	2	2	0	Tetratricopeptide	repeat
PIN	PF01850.16	gi|479324837|ref|YP_007864887.1|	-	4.8e-15	55.9	0.2	6.3e-15	55.5	0.2	1.2	1	0	0	1	1	1	1	PIN	domain
DnaB	PF00772.16	gi|479324837|ref|YP_007864887.1|	-	0.11	12.3	0.2	0.24	11.2	0.1	1.7	1	1	0	1	1	1	0	DnaB-like	helicase	N	terminal	domain
Phenol_Hydrox	PF02332.13	gi|479324838|ref|YP_007864888.1|	-	2.7e-31	108.6	0.5	3.5e-31	108.3	0.3	1.2	1	0	0	1	1	1	1	Methane/Phenol/Toluene	Hydroxylase
DUF59	PF01883.14	gi|479324839|ref|YP_007864889.1|	-	1.1e-11	44.5	0.0	1.8e-11	43.8	0.0	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF59
TPP_enzyme_N	PF02776.13	gi|479324840|ref|YP_007864890.1|	-	5.9e-50	169.1	0.0	3.8e-49	166.4	0.0	2.1	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|479324840|ref|YP_007864890.1|	-	6e-33	113.5	0.0	5.3e-31	107.2	0.0	3.0	3	0	0	3	3	3	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.17	gi|479324840|ref|YP_007864890.1|	-	7.1e-33	113.2	0.0	1.1e-32	112.5	0.0	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
FIST_C	PF10442.4	gi|479324840|ref|YP_007864890.1|	-	0.026	14.4	0.0	0.061	13.2	0.0	1.6	1	0	0	1	1	1	0	FIST	C	domain
XFP_N	PF09364.5	gi|479324840|ref|YP_007864890.1|	-	0.053	12.0	0.0	0.086	11.3	0.0	1.3	1	0	0	1	1	1	0	XFP	N-terminal	domain
Rieske	PF00355.21	gi|479324842|ref|YP_007864892.1|	-	3.9e-09	35.9	0.0	7.1e-09	35.1	0.0	1.4	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Rieske_2	PF13806.1	gi|479324842|ref|YP_007864892.1|	-	2e-08	33.8	0.0	5.5e-08	32.4	0.0	1.7	2	0	0	2	2	2	1	Rieske-like	[2Fe-2S]	domain
Rep_fac_C	PF08542.6	gi|479324842|ref|YP_007864892.1|	-	0.12	12.3	0.8	7	6.7	0.0	2.6	2	0	0	2	2	2	0	Replication	factor	C	C-terminal	domain
Ta0938	PF11494.3	gi|479324843|ref|YP_007864893.1|	-	4.7e-54	180.9	6.3	5.1e-54	180.8	4.3	1.0	1	0	0	1	1	1	1	Ta0938
DUF3887	PF13026.1	gi|479324843|ref|YP_007864893.1|	-	0.053	13.8	0.8	0.13	12.5	0.5	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3887)
PRTase_3	PF15610.1	gi|479324843|ref|YP_007864893.1|	-	0.065	12.1	0.6	0.51	9.2	0.0	2.0	1	1	1	2	2	2	0	PRTase	ComF-like
TENA_THI-4	PF03070.11	gi|479324844|ref|YP_007864894.1|	-	2.5e-21	76.3	0.1	2.9e-21	76.1	0.1	1.0	1	0	0	1	1	1	1	TENA/THI-4/PQQC	family
Haem_oxygenas_2	PF14518.1	gi|479324844|ref|YP_007864894.1|	-	3.9e-05	23.7	0.0	6e-05	23.1	0.0	1.3	1	0	0	1	1	1	1	Iron-containing	redox	enzyme
FCH	PF00611.18	gi|479324844|ref|YP_007864894.1|	-	0.047	13.8	0.1	0.094	12.9	0.0	1.6	2	0	0	2	2	2	0	Fes/CIP4,	and	EFC/F-BAR	homology	domain
Alpha-amyl_C	PF09071.5	gi|479324844|ref|YP_007864894.1|	-	0.13	12.0	0.0	0.27	11.0	0.0	1.6	1	0	0	1	1	1	0	Alpha-amylase,	C	terminal
Pirin	PF02678.11	gi|479324845|ref|YP_007864895.1|	-	5.9e-37	125.8	0.0	1.9e-36	124.2	0.0	1.8	2	0	0	2	2	2	1	Pirin
Pirin_C	PF05726.8	gi|479324845|ref|YP_007864895.1|	-	1.7e-25	89.0	0.0	8.3e-25	86.8	0.0	1.9	2	0	0	2	2	2	1	Pirin	C-terminal	cupin	domain
DUF4369	PF14289.1	gi|479324845|ref|YP_007864895.1|	-	0.017	15.1	0.0	0.041	13.8	0.0	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4369)
MarR	PF01047.17	gi|479324846|ref|YP_007864896.1|	-	0.0065	16.1	0.7	0.042	13.5	0.2	2.1	1	1	2	3	3	3	1	MarR	family
HTH_Crp_2	PF13545.1	gi|479324846|ref|YP_007864896.1|	-	0.12	12.2	0.1	0.24	11.2	0.0	1.4	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
MFS_1	PF07690.11	gi|479324847|ref|YP_007864897.1|	-	1.1e-26	93.3	51.2	4.6e-17	61.7	20.0	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|479324847|ref|YP_007864897.1|	-	4.2e-21	75.0	37.9	4e-18	65.2	8.9	2.3	1	1	1	2	2	2	2	Sugar	(and	other)	transporter
Imm_superinfect	PF14373.1	gi|479324847|ref|YP_007864897.1|	-	0.014	14.9	2.5	0.13	11.8	0.1	3.2	3	0	0	3	3	3	0	Superinfection	immunity	protein
ECH	PF00378.15	gi|479324848|ref|YP_007864898.1|	-	4.9e-47	160.1	0.0	5.7e-47	159.9	0.0	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
ADH_N	PF08240.7	gi|479324849|ref|YP_007864899.1|	-	1.6e-34	117.9	0.2	2.7e-34	117.2	0.1	1.4	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|479324849|ref|YP_007864899.1|	-	6.2e-29	100.1	0.4	6.2e-29	100.1	0.3	1.6	2	0	0	2	2	2	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|479324849|ref|YP_007864899.1|	-	1.4e-13	51.8	0.2	2.7e-13	50.9	0.0	1.6	2	0	0	2	2	1	1	Zinc-binding	dehydrogenase
Methyltransf_18	PF12847.2	gi|479324849|ref|YP_007864899.1|	-	1.1e-05	25.9	0.0	2.1e-05	25.0	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|479324849|ref|YP_007864899.1|	-	1.2e-05	24.9	0.0	2e-05	24.1	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
DapB_N	PF01113.15	gi|479324849|ref|YP_007864899.1|	-	0.002	18.0	0.6	0.0039	17.1	0.4	1.5	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
MTS	PF05175.9	gi|479324849|ref|YP_007864899.1|	-	0.0045	16.3	0.2	0.0086	15.4	0.1	1.4	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_25	PF13649.1	gi|479324849|ref|YP_007864899.1|	-	0.0073	16.6	0.0	0.013	15.8	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|479324849|ref|YP_007864899.1|	-	0.0084	16.5	0.0	0.014	15.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|479324849|ref|YP_007864899.1|	-	0.009	16.4	0.0	0.018	15.5	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_4	PF02390.12	gi|479324849|ref|YP_007864899.1|	-	0.014	14.4	0.0	0.024	13.6	0.0	1.4	1	0	0	1	1	1	0	Putative	methyltransferase
Methyltransf_32	PF13679.1	gi|479324849|ref|YP_007864899.1|	-	0.017	14.8	0.0	0.027	14.1	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|479324849|ref|YP_007864899.1|	-	0.021	14.8	0.0	0.041	13.9	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
TrkA_N	PF02254.13	gi|479324849|ref|YP_007864899.1|	-	0.025	14.5	0.2	0.055	13.4	0.2	1.6	1	0	0	1	1	1	0	TrkA-N	domain
Eno-Rase_NADH_b	PF12242.3	gi|479324849|ref|YP_007864899.1|	-	0.066	12.9	0.5	0.15	11.8	0.4	1.6	1	0	0	1	1	1	0	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
PEPCK	PF00821.13	gi|479324850|ref|YP_007864900.1|	-	2.8e-196	653.1	0.0	3.2e-196	652.9	0.0	1.0	1	0	0	1	1	1	1	Phosphoenolpyruvate	carboxykinase
Glycos_transf_1	PF00534.15	gi|479324851|ref|YP_007864901.1|	-	3.4e-13	49.3	0.0	5.9e-13	48.5	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Phosphorylase	PF00343.15	gi|479324851|ref|YP_007864901.1|	-	1.5e-07	29.7	0.0	1.5e-06	26.4	0.0	2.0	2	0	0	2	2	2	1	Carbohydrate	phosphorylase
Glyco_trans_1_4	PF13692.1	gi|479324851|ref|YP_007864901.1|	-	0.0036	17.4	0.0	0.007	16.5	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Aldedh	PF00171.17	gi|479324853|ref|YP_007864903.1|	-	1.7e-129	432.1	0.0	2.4e-129	431.6	0.0	1.1	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
LuxC	PF05893.9	gi|479324853|ref|YP_007864903.1|	-	1.4e-07	30.6	0.0	2.4e-07	29.8	0.0	1.5	1	1	0	1	1	1	1	Acyl-CoA	reductase	(LuxC)
PIN	PF01850.16	gi|479324854|ref|YP_007864904.1|	-	3.2e-08	33.9	0.8	3.6e-08	33.7	0.5	1.1	1	0	0	1	1	1	1	PIN	domain
SNF2_assoc	PF08455.5	gi|479324854|ref|YP_007864904.1|	-	0.026	13.0	0.6	0.029	12.9	0.4	1.0	1	0	0	1	1	1	0	Bacterial	SNF2	helicase	associated
GnsAB	PF08178.6	gi|479324855|ref|YP_007864905.1|	-	0.12	12.0	4.3	0.21	11.2	2.9	1.5	1	1	0	1	1	1	0	GnsA/GnsB	family
DUF1104	PF06518.6	gi|479324855|ref|YP_007864905.1|	-	0.14	12.2	2.1	0.17	12.0	1.5	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1104)
Histone_HNS	PF00816.16	gi|479324855|ref|YP_007864905.1|	-	0.19	12.2	1.6	0.37	11.3	1.1	1.5	1	1	0	1	1	1	0	H-NS	histone	family
PIG-L	PF02585.12	gi|479324856|ref|YP_007864906.1|	-	5.3e-28	98.0	0.0	6.8e-28	97.7	0.0	1.1	1	0	0	1	1	1	1	GlcNAc-PI	de-N-acetylase
Glycos_transf_1	PF00534.15	gi|479324857|ref|YP_007864907.1|	-	3.5e-21	75.3	0.0	7.5e-21	74.2	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|479324857|ref|YP_007864907.1|	-	4e-13	49.6	0.0	8.3e-13	48.6	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|479324857|ref|YP_007864907.1|	-	0.0022	18.2	0.0	0.0074	16.5	0.0	2.0	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Macro	PF01661.16	gi|479324858|ref|YP_007864908.1|	-	4.8e-36	123.2	0.2	8.9e-36	122.3	0.0	1.4	2	0	0	2	2	2	1	Macro	domain
Macro_2	PF14519.1	gi|479324858|ref|YP_007864908.1|	-	0.048	12.7	1.2	0.81	8.7	0.1	2.1	1	1	0	2	2	2	0	Macro-like	domain
Arch_ATPase	PF01637.13	gi|479324860|ref|YP_007864910.1|	-	1.6e-38	132.7	1.0	1.6e-38	132.7	0.7	1.9	2	0	0	2	2	2	1	Archaeal	ATPase
AAA_14	PF13173.1	gi|479324860|ref|YP_007864910.1|	-	5.1e-11	42.5	3.0	7.4e-09	35.5	0.3	3.3	2	1	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|479324860|ref|YP_007864910.1|	-	5.1e-09	36.3	0.0	1.6e-08	34.7	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|479324860|ref|YP_007864910.1|	-	4.9e-05	23.3	0.1	0.00012	22.0	0.0	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
DUF1803	PF08820.5	gi|479324860|ref|YP_007864910.1|	-	0.0092	15.6	0.4	0.026	14.2	0.3	1.8	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1803)
AAA	PF00004.24	gi|479324860|ref|YP_007864910.1|	-	0.01	16.0	0.0	0.059	13.5	0.0	2.2	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
HTH_45	PF14947.1	gi|479324860|ref|YP_007864910.1|	-	0.016	14.9	2.5	0.61	9.9	0.1	3.6	4	0	0	4	4	4	0	Winged	helix-turn-helix
PPP4R2	PF09184.6	gi|479324860|ref|YP_007864910.1|	-	0.084	12.4	0.3	0.13	11.7	0.2	1.3	1	0	0	1	1	1	0	PPP4R2
SBP_bac_5	PF00496.17	gi|479324861|ref|YP_007864911.1|	-	5.4e-31	107.7	12.3	2.8e-20	72.5	1.9	2.5	2	0	0	2	2	2	2	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
Mucin	PF01456.12	gi|479324861|ref|YP_007864911.1|	-	0.045	13.5	18.7	0.11	12.3	13.0	1.6	1	0	0	1	1	1	0	Mucin-like	glycoprotein
TMEM154	PF15102.1	gi|479324861|ref|YP_007864911.1|	-	7.8	6.2	8.1	15	5.2	5.6	1.4	1	0	0	1	1	1	0	TMEM154	protein	family
HALZ	PF02183.13	gi|479324862|ref|YP_007864912.1|	-	0.0005	19.7	6.8	1.6	8.5	0.1	3.6	1	1	2	4	4	4	3	Homeobox	associated	leucine	zipper
Lectin_N	PF03954.9	gi|479324862|ref|YP_007864912.1|	-	0.02	14.2	0.3	0.045	13.1	0.2	1.6	1	0	0	1	1	1	0	Hepatic	lectin,	N-terminal	domain
DUF342	PF03961.8	gi|479324862|ref|YP_007864912.1|	-	0.021	13.2	0.0	0.036	12.4	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
GAS	PF13851.1	gi|479324862|ref|YP_007864912.1|	-	0.061	12.5	0.9	0.18	10.9	0.6	1.7	1	1	0	1	1	1	0	Growth-arrest	specific	micro-tubule	binding
DUF4446	PF14584.1	gi|479324862|ref|YP_007864912.1|	-	0.077	12.8	4.0	0.17	11.6	2.8	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4446)
Syntaxin_2	PF14523.1	gi|479324862|ref|YP_007864912.1|	-	0.1	12.6	1.4	0.26	11.3	0.9	1.6	1	0	0	1	1	1	0	Syntaxin-like	protein
Laminin_I	PF06008.9	gi|479324862|ref|YP_007864912.1|	-	0.16	11.2	0.7	0.31	10.3	0.5	1.4	1	0	0	1	1	1	0	Laminin	Domain	I
IFT57	PF10498.4	gi|479324862|ref|YP_007864912.1|	-	0.38	9.4	1.7	1.3	7.7	1.2	1.7	1	1	0	1	1	1	0	Intra-flagellar	transport	protein	57
BLOC1_2	PF10046.4	gi|479324862|ref|YP_007864912.1|	-	0.82	9.8	9.2	0.16	12.1	1.7	2.6	2	1	1	3	3	3	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
V-ATPase_C	PF03223.10	gi|479324862|ref|YP_007864912.1|	-	0.93	8.3	7.0	0.98	8.2	0.7	2.4	1	1	1	2	2	2	0	V-ATPase	subunit	C
BPD_transp_1	PF00528.17	gi|479324863|ref|YP_007864913.1|	-	1.8e-32	112.3	17.6	1.8e-32	112.3	12.2	2.3	3	0	0	3	3	3	1	Binding-protein-dependent	transport	system	inner	membrane	component
DUF3791	PF12668.2	gi|479324863|ref|YP_007864913.1|	-	0.021	14.4	0.2	0.27	10.8	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3791)
BPD_transp_1	PF00528.17	gi|479324864|ref|YP_007864914.1|	-	1.4e-26	93.1	20.2	1.4e-26	93.1	14.0	2.6	3	0	0	3	3	3	1	Binding-protein-dependent	transport	system	inner	membrane	component
ABC_tran	PF00005.22	gi|479324865|ref|YP_007864915.1|	-	9.2e-23	81.0	0.0	1.3e-22	80.5	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|479324865|ref|YP_007864915.1|	-	6.2e-22	77.7	0.0	1.2e-21	76.8	0.0	1.5	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|479324865|ref|YP_007864915.1|	-	2.5e-11	44.0	4.6	2.4e-10	40.8	3.2	2.0	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|479324865|ref|YP_007864915.1|	-	0.00017	20.9	0.7	0.003	16.8	0.5	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|479324865|ref|YP_007864915.1|	-	0.00053	19.1	2.0	0.22	10.5	0.5	2.1	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_17	PF13207.1	gi|479324865|ref|YP_007864915.1|	-	0.00068	20.4	0.0	0.0012	19.6	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.1	gi|479324865|ref|YP_007864915.1|	-	0.00084	19.7	2.4	0.0018	18.6	1.7	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|479324865|ref|YP_007864915.1|	-	0.0009	19.5	0.0	0.002	18.4	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|479324865|ref|YP_007864915.1|	-	0.0012	18.9	0.0	0.0024	18.0	0.0	1.6	2	0	0	2	2	1	1	AAA	domain
T2SE	PF00437.15	gi|479324865|ref|YP_007864915.1|	-	0.0016	17.4	0.0	0.0029	16.5	0.0	1.4	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_16	PF13191.1	gi|479324865|ref|YP_007864915.1|	-	0.0018	18.2	0.0	0.0034	17.3	0.0	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
DUF87	PF01935.12	gi|479324865|ref|YP_007864915.1|	-	0.0029	17.4	0.2	0.0069	16.2	0.0	1.7	2	1	0	2	2	2	1	Domain	of	unknown	function	DUF87
AAA_29	PF13555.1	gi|479324865|ref|YP_007864915.1|	-	0.0056	16.1	0.0	0.0097	15.4	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|479324865|ref|YP_007864915.1|	-	0.0077	15.7	0.1	0.016	14.6	0.0	1.4	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
AAA_14	PF13173.1	gi|479324865|ref|YP_007864915.1|	-	0.012	15.4	0.1	0.034	14.0	0.1	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_13	PF13166.1	gi|479324865|ref|YP_007864915.1|	-	0.013	13.9	0.2	0.47	8.8	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
AAA_25	PF13481.1	gi|479324865|ref|YP_007864915.1|	-	0.021	14.2	0.0	0.032	13.6	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|479324865|ref|YP_007864915.1|	-	0.021	14.9	0.0	0.038	14.1	0.0	1.5	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
TIP49	PF06068.8	gi|479324865|ref|YP_007864915.1|	-	0.026	13.2	0.1	0.12	11.0	0.0	1.8	2	0	0	2	2	2	0	TIP49	C-terminus
MMR_HSR1	PF01926.18	gi|479324865|ref|YP_007864915.1|	-	0.028	14.3	0.3	0.044	13.7	0.2	1.7	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
Zeta_toxin	PF06414.7	gi|479324865|ref|YP_007864915.1|	-	0.033	13.2	0.0	0.054	12.5	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
NB-ARC	PF00931.17	gi|479324865|ref|YP_007864915.1|	-	0.033	13.0	0.0	0.057	12.2	0.0	1.3	1	0	0	1	1	1	0	NB-ARC	domain
NACHT	PF05729.7	gi|479324865|ref|YP_007864915.1|	-	0.046	13.3	0.0	0.075	12.6	0.0	1.3	1	0	0	1	1	1	0	NACHT	domain
AAA_19	PF13245.1	gi|479324865|ref|YP_007864915.1|	-	0.048	13.4	0.0	0.1	12.3	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
ResIII	PF04851.10	gi|479324865|ref|YP_007864915.1|	-	0.076	12.8	0.0	0.11	12.3	0.0	1.4	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
MobB	PF03205.9	gi|479324865|ref|YP_007864915.1|	-	0.079	12.6	0.0	0.19	11.4	0.0	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Sigma54_activat	PF00158.21	gi|479324865|ref|YP_007864915.1|	-	0.095	12.1	0.0	0.19	11.2	0.0	1.4	1	0	0	1	1	1	0	Sigma-54	interaction	domain
AAA_33	PF13671.1	gi|479324865|ref|YP_007864915.1|	-	0.13	12.1	0.0	0.2	11.5	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|479324865|ref|YP_007864915.1|	-	0.14	11.6	0.0	0.18	11.1	0.0	1.4	1	0	0	1	1	1	0	AAA-like	domain
DEAD	PF00270.24	gi|479324865|ref|YP_007864915.1|	-	0.14	11.6	0.0	0.18	11.2	0.0	1.3	1	1	0	1	1	1	0	DEAD/DEAH	box	helicase
ABC_tran	PF00005.22	gi|479324866|ref|YP_007864916.1|	-	2.9e-28	98.8	0.0	3.8e-28	98.4	0.0	1.1	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|479324866|ref|YP_007864916.1|	-	1.1e-20	73.6	0.1	1.9e-20	72.9	0.0	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|479324866|ref|YP_007864916.1|	-	2.9e-07	30.7	1.7	0.0057	16.6	0.0	2.1	1	1	1	2	2	2	2	AAA	domain
UPF0079	PF02367.12	gi|479324866|ref|YP_007864916.1|	-	0.00087	18.9	0.1	0.0016	18.0	0.1	1.3	1	0	0	1	1	1	1	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_29	PF13555.1	gi|479324866|ref|YP_007864916.1|	-	0.0042	16.5	0.1	0.0075	15.7	0.1	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.1	gi|479324866|ref|YP_007864916.1|	-	0.0082	16.2	0.1	0.021	14.9	0.1	1.8	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|479324866|ref|YP_007864916.1|	-	0.014	15.5	0.0	0.03	14.5	0.0	1.7	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
SMC_N	PF02463.14	gi|479324866|ref|YP_007864916.1|	-	0.015	14.5	0.1	0.04	13.1	0.1	1.6	1	1	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
NB-ARC	PF00931.17	gi|479324866|ref|YP_007864916.1|	-	0.04	12.7	0.0	0.057	12.2	0.0	1.2	1	0	0	1	1	1	0	NB-ARC	domain
AAA_23	PF13476.1	gi|479324866|ref|YP_007864916.1|	-	0.045	14.0	0.8	0.22	11.8	0.2	2.0	2	0	0	2	2	2	0	AAA	domain
AAA_18	PF13238.1	gi|479324866|ref|YP_007864916.1|	-	0.085	13.1	0.3	0.16	12.3	0.2	1.5	1	1	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|479324866|ref|YP_007864916.1|	-	0.093	12.1	0.0	0.93	8.8	0.0	2.0	2	0	0	2	2	2	0	AAA-like	domain
AAA_17	PF13207.1	gi|479324866|ref|YP_007864916.1|	-	0.12	13.2	0.2	0.19	12.5	0.1	1.5	1	1	0	1	1	1	0	AAA	domain
AAA_16	PF13191.1	gi|479324866|ref|YP_007864916.1|	-	0.16	11.9	0.2	0.24	11.3	0.2	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_13	PF13166.1	gi|479324866|ref|YP_007864916.1|	-	0.25	9.7	0.3	1.1	7.6	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
DUF1469	PF07332.6	gi|479324868|ref|YP_007864918.1|	-	0.36	10.5	4.0	0.48	10.1	2.8	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1469)
DUF2892	PF11127.3	gi|479324868|ref|YP_007864918.1|	-	3.3	7.6	5.6	8.3	6.3	3.9	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2892)
ABC_tran	PF00005.22	gi|479324869|ref|YP_007864919.1|	-	1.7e-28	99.5	0.0	2.4e-28	99.1	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|479324869|ref|YP_007864919.1|	-	9.4e-21	73.9	0.0	1.6e-20	73.2	0.0	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|479324869|ref|YP_007864919.1|	-	6.2e-06	26.3	1.6	0.0013	18.7	0.3	2.5	2	1	0	2	2	2	1	AAA	domain
AAA_10	PF12846.2	gi|479324869|ref|YP_007864919.1|	-	0.0016	17.9	0.0	0.034	13.5	0.0	2.3	1	1	2	3	3	3	1	AAA-like	domain
SMC_N	PF02463.14	gi|479324869|ref|YP_007864919.1|	-	0.0023	17.1	0.3	0.012	14.9	0.2	1.9	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
T2SE	PF00437.15	gi|479324869|ref|YP_007864919.1|	-	0.0077	15.1	0.1	0.011	14.6	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_22	PF13401.1	gi|479324869|ref|YP_007864919.1|	-	0.0083	16.2	1.3	0.093	12.8	0.9	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|479324869|ref|YP_007864919.1|	-	0.014	14.9	0.3	0.027	13.9	0.2	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
KaiC	PF06745.8	gi|479324869|ref|YP_007864919.1|	-	0.031	13.3	0.1	0.055	12.5	0.1	1.4	1	0	0	1	1	1	0	KaiC
NB-ARC	PF00931.17	gi|479324869|ref|YP_007864919.1|	-	0.038	12.8	0.4	0.061	12.1	0.2	1.3	1	0	0	1	1	1	0	NB-ARC	domain
AAA_16	PF13191.1	gi|479324869|ref|YP_007864919.1|	-	0.076	12.9	0.0	0.11	12.5	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
ABC_tran	PF00005.22	gi|479324870|ref|YP_007864920.1|	-	3.9e-25	88.7	0.0	5.6e-25	88.2	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|479324870|ref|YP_007864920.1|	-	5.7e-19	68.2	0.0	9.6e-19	67.5	0.0	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|479324870|ref|YP_007864920.1|	-	1.7e-13	51.1	2.9	2.5e-11	44.0	0.2	2.1	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|479324870|ref|YP_007864920.1|	-	6.1e-06	25.6	0.2	0.00022	20.5	0.0	2.1	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|479324870|ref|YP_007864920.1|	-	9.1e-05	21.6	3.4	0.0038	16.3	0.6	2.1	1	1	0	2	2	2	2	AAA	ATPase	domain
AAA_29	PF13555.1	gi|479324870|ref|YP_007864920.1|	-	0.0079	15.6	0.0	0.015	14.8	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_18	PF13238.1	gi|479324870|ref|YP_007864920.1|	-	0.0081	16.4	0.3	0.085	13.1	0.1	2.2	2	0	0	2	2	2	1	AAA	domain
PRK	PF00485.13	gi|479324870|ref|YP_007864920.1|	-	0.012	15.1	0.1	0.02	14.4	0.1	1.6	1	1	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_25	PF13481.1	gi|479324870|ref|YP_007864920.1|	-	0.023	14.0	0.0	0.15	11.4	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
DUF258	PF03193.11	gi|479324870|ref|YP_007864920.1|	-	0.042	13.0	0.0	0.078	12.1	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_17	PF13207.1	gi|479324870|ref|YP_007864920.1|	-	0.2	12.4	1.0	0.99	10.2	0.7	2.2	1	1	0	1	1	1	0	AAA	domain
AAA_22	PF13401.1	gi|479324870|ref|YP_007864920.1|	-	0.54	10.4	4.4	15	5.6	3.1	2.2	1	1	0	1	1	1	0	AAA	domain
BPD_transp_1	PF00528.17	gi|479324871|ref|YP_007864921.1|	-	4.5e-13	49.1	20.1	4.5e-13	49.1	13.9	2.4	2	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.2	gi|479324871|ref|YP_007864921.1|	-	0.00017	20.8	1.1	0.00051	19.3	0.2	2.3	2	0	0	2	2	2	1	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
BPD_transp_1	PF00528.17	gi|479324872|ref|YP_007864922.1|	-	1.5e-36	125.6	13.4	1.5e-36	125.6	9.3	2.9	2	1	1	3	3	3	1	Binding-protein-dependent	transport	system	inner	membrane	component
PGG	PF13962.1	gi|479324872|ref|YP_007864922.1|	-	0.1	12.2	0.1	0.1	12.2	0.1	3.2	2	1	1	3	3	3	0	Domain	of	unknown	function
DUF1230	PF06799.6	gi|479324872|ref|YP_007864922.1|	-	8.7	6.2	9.1	17	5.2	0.0	3.7	3	2	1	4	4	4	0	Protein	of	unknown	function	(DUF1230)
SBP_bac_5	PF00496.17	gi|479324873|ref|YP_007864923.1|	-	2.3e-19	69.4	4.6	3.4e-15	55.7	0.6	3.4	3	0	0	3	3	3	3	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
DUF1285	PF06938.6	gi|479324873|ref|YP_007864923.1|	-	0.05	13.5	0.0	0.11	12.4	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1285)
Rifin_STEVOR	PF02009.11	gi|479324873|ref|YP_007864923.1|	-	0.1	12.2	10.4	0.16	11.5	7.2	1.3	1	0	0	1	1	1	0	Rifin/stevor	family
DUF871	PF05913.6	gi|479324874|ref|YP_007864924.1|	-	6.4e-76	255.5	0.1	7.2e-76	255.3	0.1	1.0	1	0	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF871)
tRNA_SAD	PF07973.9	gi|479324875|ref|YP_007864925.1|	-	0.024	14.4	0.0	0.043	13.7	0.0	1.4	1	0	0	1	1	1	0	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
Poxvirus	PF06227.7	gi|479324875|ref|YP_007864925.1|	-	0.21	11.1	1.6	0.42	10.1	1.1	1.6	1	1	0	1	1	1	0	dsDNA	Poxvirus
Synapsin_N	PF10581.4	gi|479324876|ref|YP_007864926.1|	-	0.012	15.4	0.0	0.033	13.9	0.0	1.7	1	0	0	1	1	1	0	Synapsin	N-terminal
SIS	PF01380.17	gi|479324878|ref|YP_007864928.1|	-	3.8e-37	126.8	1.0	4.6e-25	87.7	0.4	2.5	2	0	0	2	2	2	2	SIS	domain
GATase_6	PF13522.1	gi|479324878|ref|YP_007864928.1|	-	1.8e-16	60.3	0.0	3.2e-16	59.4	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_7	PF13537.1	gi|479324878|ref|YP_007864928.1|	-	3.5e-13	49.3	0.0	7.1e-13	48.3	0.0	1.6	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_2	PF00310.16	gi|479324878|ref|YP_007864928.1|	-	1.1e-10	40.7	0.0	7.8e-07	28.1	0.0	3.2	1	1	2	3	3	3	2	Glutamine	amidotransferases	class-II
SIS_2	PF13580.1	gi|479324878|ref|YP_007864928.1|	-	3.4e-05	23.5	4.2	0.0035	17.0	1.2	3.9	2	2	1	3	3	3	1	SIS	domain
GATase_4	PF13230.1	gi|479324878|ref|YP_007864928.1|	-	0.0013	17.4	0.0	0.0023	16.6	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
ApoLp-III	PF07464.6	gi|479324878|ref|YP_007864928.1|	-	0.0088	16.0	0.1	0.22	11.5	0.1	2.4	2	0	0	2	2	2	1	Apolipophorin-III	precursor	(apoLp-III)
ParA	PF10609.4	gi|479324878|ref|YP_007864928.1|	-	0.035	14.0	2.9	0.092	12.6	0.1	2.8	3	0	0	3	3	3	0	ParA/MinD	ATPase	like
ABC_tran	PF00005.22	gi|479324879|ref|YP_007864929.1|	-	9e-25	87.5	0.0	1.6e-24	86.7	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|479324879|ref|YP_007864929.1|	-	8.4e-16	58.7	6.2	4.5e-09	36.6	0.2	2.4	2	1	1	3	3	3	2	AAA	domain
AAA_15	PF13175.1	gi|479324879|ref|YP_007864929.1|	-	2e-08	33.7	0.9	8.2e-05	21.8	0.8	2.2	1	1	1	2	2	2	2	AAA	ATPase	domain
ArgK	PF03308.11	gi|479324879|ref|YP_007864929.1|	-	0.00016	20.5	0.0	0.00025	19.9	0.0	1.3	1	0	0	1	1	1	1	ArgK	protein
SRP54	PF00448.17	gi|479324879|ref|YP_007864929.1|	-	0.00027	20.4	0.0	0.00062	19.2	0.0	1.6	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
AAA_22	PF13401.1	gi|479324879|ref|YP_007864929.1|	-	0.00038	20.6	0.0	0.0018	18.4	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.1	gi|479324879|ref|YP_007864929.1|	-	0.00071	19.9	3.0	0.0011	19.2	2.1	1.7	1	1	0	1	1	1	1	AAA	domain
MobB	PF03205.9	gi|479324879|ref|YP_007864929.1|	-	0.002	17.8	0.1	0.0047	16.6	0.0	1.6	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_33	PF13671.1	gi|479324879|ref|YP_007864929.1|	-	0.0039	17.0	0.0	0.019	14.8	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_30	PF13604.1	gi|479324879|ref|YP_007864929.1|	-	0.0066	16.0	0.1	0.013	15.1	0.1	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|479324879|ref|YP_007864929.1|	-	0.0095	15.4	0.4	0.018	14.5	0.3	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.1	gi|479324879|ref|YP_007864929.1|	-	0.015	15.3	0.2	0.11	12.5	0.2	2.0	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_10	PF12846.2	gi|479324879|ref|YP_007864929.1|	-	0.023	14.1	0.2	0.58	9.5	0.1	2.2	2	0	0	2	2	2	0	AAA-like	domain
SMC_N	PF02463.14	gi|479324879|ref|YP_007864929.1|	-	0.029	13.6	0.9	3	7.0	0.1	2.3	2	0	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
AAA	PF00004.24	gi|479324879|ref|YP_007864929.1|	-	0.031	14.4	0.5	0.078	13.1	0.4	2.0	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF258	PF03193.11	gi|479324879|ref|YP_007864929.1|	-	0.037	13.2	0.1	0.081	12.1	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
Mur_ligase_M	PF08245.7	gi|479324879|ref|YP_007864929.1|	-	0.041	13.9	0.0	0.094	12.7	0.0	1.6	1	0	0	1	1	1	0	Mur	ligase	middle	domain
AAA_17	PF13207.1	gi|479324879|ref|YP_007864929.1|	-	0.055	14.2	0.8	0.11	13.3	0.5	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_18	PF13238.1	gi|479324879|ref|YP_007864929.1|	-	0.076	13.3	3.1	1.5	9.1	2.1	2.4	1	1	0	1	1	1	0	AAA	domain
Thymidylate_kin	PF02223.12	gi|479324879|ref|YP_007864929.1|	-	0.08	12.3	0.0	0.21	10.9	0.0	1.8	2	0	0	2	2	2	0	Thymidylate	kinase
AAA_25	PF13481.1	gi|479324879|ref|YP_007864929.1|	-	0.11	11.8	0.0	0.38	10.1	0.0	1.9	3	0	0	3	3	3	0	AAA	domain
AAA_19	PF13245.1	gi|479324879|ref|YP_007864929.1|	-	0.14	11.8	0.7	0.42	10.3	0.5	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_28	PF13521.1	gi|479324879|ref|YP_007864929.1|	-	0.18	11.7	0.2	0.47	10.4	0.1	1.7	2	0	0	2	2	2	0	AAA	domain
DUF1418	PF07214.7	gi|479324881|ref|YP_007864931.1|	-	0.48	10.0	3.4	0.91	9.1	0.1	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1418)
Lysine_decarbox	PF03641.9	gi|479324882|ref|YP_007864932.1|	-	0.00083	19.1	0.1	0.0016	18.2	0.1	1.7	1	1	1	2	2	2	1	Possible	lysine	decarboxylase
Nuc_deoxyrib_tr	PF05014.10	gi|479324882|ref|YP_007864932.1|	-	0.0018	18.1	0.0	0.0042	16.9	0.0	1.6	1	1	0	1	1	1	1	Nucleoside	2-deoxyribosyltransferase
CRS1_YhbY	PF01985.16	gi|479324882|ref|YP_007864932.1|	-	0.0083	16.1	0.1	0.059	13.3	0.0	2.2	2	1	0	2	2	2	1	CRS1	/	YhbY	(CRM)	domain
Ldh_2	PF02615.9	gi|479324883|ref|YP_007864933.1|	-	9.1e-65	218.5	0.0	3.6e-64	216.5	0.0	1.7	1	1	0	1	1	1	1	Malate/L-lactate	dehydrogenase
SAF	PF08666.7	gi|479324884|ref|YP_007864934.1|	-	5.8e-15	55.4	2.7	1.1e-14	54.5	1.9	1.5	1	1	0	1	1	1	1	SAF	domain
DUF2190	PF09956.4	gi|479324884|ref|YP_007864934.1|	-	0.041	13.6	0.1	0.18	11.5	0.1	1.9	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2190)
DUF3465	PF11948.3	gi|479324884|ref|YP_007864934.1|	-	0.073	12.8	0.1	0.19	11.5	0.0	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3465)
GD_AH_C	PF04295.8	gi|479324885|ref|YP_007864935.1|	-	3.1e-128	427.8	0.0	3.5e-128	427.6	0.0	1.0	1	0	0	1	1	1	1	D-galactarate	dehydratase	/	Altronate	hydrolase,	C	terminus
MR_MLE_C	PF13378.1	gi|479324886|ref|YP_007864936.1|	-	2.9e-16	59.4	0.0	5.4e-16	58.5	0.0	1.4	1	0	0	1	1	1	1	Enolase	C-terminal	domain-like
MR_MLE	PF01188.16	gi|479324886|ref|YP_007864936.1|	-	6.9e-12	45.7	0.0	1.1e-11	45.0	0.0	1.3	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
MR_MLE_N	PF02746.11	gi|479324886|ref|YP_007864936.1|	-	4.3e-07	29.9	0.0	6.9e-07	29.2	0.0	1.3	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	N-terminal	domain
DUF3397	PF11877.3	gi|479324887|ref|YP_007864937.1|	-	0.0097	15.8	0.6	0.012	15.6	0.4	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3397)
COX6C	PF02937.10	gi|479324887|ref|YP_007864937.1|	-	0.017	15.0	0.0	0.019	14.8	0.0	1.2	1	0	0	1	1	1	0	Cytochrome	c	oxidase	subunit	VIc
NicO	PF03824.11	gi|479324888|ref|YP_007864938.1|	-	0.0018	17.6	0.9	0.0018	17.6	0.6	1.0	1	0	0	1	1	1	1	High-affinity	nickel-transport	protein
NicO	PF03824.11	gi|479324889|ref|YP_007864939.1|	-	8.5e-10	38.4	0.6	9.7e-10	38.2	0.4	1.0	1	0	0	1	1	1	1	High-affinity	nickel-transport	protein
DUF2231	PF09990.4	gi|479324889|ref|YP_007864939.1|	-	0.1	12.9	0.1	0.14	12.5	0.1	1.2	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2231)
NicO	PF03824.11	gi|479324890|ref|YP_007864940.1|	-	5.5e-52	176.8	1.4	5.5e-52	176.8	1.0	1.3	2	0	0	2	2	2	1	High-affinity	nickel-transport	protein
2TM	PF13239.1	gi|479324890|ref|YP_007864940.1|	-	1.6	8.8	7.7	0.13	12.3	0.5	2.5	3	0	0	3	3	3	0	2TM	domain
FCD	PF07729.7	gi|479324891|ref|YP_007864941.1|	-	1.1e-23	83.8	1.0	1.5e-23	83.4	0.7	1.1	1	0	0	1	1	1	1	FCD	domain
GntR	PF00392.16	gi|479324891|ref|YP_007864941.1|	-	1.8e-16	59.3	0.1	4.1e-16	58.1	0.1	1.7	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HTH_24	PF13412.1	gi|479324891|ref|YP_007864941.1|	-	0.00016	21.0	1.0	0.00048	19.4	0.2	2.3	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
FadR_C	PF07840.7	gi|479324891|ref|YP_007864941.1|	-	0.00059	19.4	0.8	0.00093	18.8	0.5	1.5	1	1	0	1	1	1	1	FadR	C-terminal	domain
Prefoldin	PF02996.12	gi|479324891|ref|YP_007864941.1|	-	0.00076	19.1	0.2	0.0016	18.0	0.1	1.5	1	0	0	1	1	1	1	Prefoldin	subunit
HTH_Crp_2	PF13545.1	gi|479324891|ref|YP_007864941.1|	-	0.00092	18.9	0.0	0.0043	16.8	0.0	2.1	1	1	1	2	2	2	1	Crp-like	helix-turn-helix	domain
TFIIE_alpha	PF02002.12	gi|479324891|ref|YP_007864941.1|	-	0.0055	16.1	3.4	0.0077	15.7	0.0	2.7	3	1	0	3	3	3	1	TFIIE	alpha	subunit
HTH_27	PF13463.1	gi|479324891|ref|YP_007864941.1|	-	0.0061	16.8	0.1	0.054	13.8	0.0	2.3	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|479324891|ref|YP_007864941.1|	-	0.0092	15.6	0.1	0.025	14.3	0.0	1.7	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_11	PF08279.7	gi|479324891|ref|YP_007864941.1|	-	0.022	14.3	1.0	0.052	13.1	0.1	2.2	2	0	0	2	2	2	0	HTH	domain
HTH_DeoR	PF08220.7	gi|479324891|ref|YP_007864941.1|	-	0.025	14.1	0.0	0.082	12.4	0.0	1.9	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
Phage_rep_O	PF04492.8	gi|479324891|ref|YP_007864941.1|	-	0.046	13.9	0.0	0.15	12.3	0.0	1.8	2	0	0	2	2	2	0	Bacteriophage	replication	protein	O
EAP30	PF04157.11	gi|479324891|ref|YP_007864941.1|	-	0.057	12.5	0.1	0.33	10.0	0.0	2.0	2	0	0	2	2	2	0	EAP30/Vps36	family
FaeA	PF04703.7	gi|479324891|ref|YP_007864941.1|	-	0.062	13.4	1.4	0.37	10.9	0.0	2.7	3	0	0	3	3	3	0	FaeA-like	protein
HTH_17	PF12728.2	gi|479324891|ref|YP_007864941.1|	-	0.062	13.5	0.0	2.2	8.5	0.0	2.5	2	0	0	2	2	2	0	Helix-turn-helix	domain
DUF4423	PF14394.1	gi|479324891|ref|YP_007864941.1|	-	0.093	12.2	5.9	0.15	11.5	0.1	3.2	2	1	2	4	4	4	0	Domain	of	unknown	function	(DUF4423)
MarR	PF01047.17	gi|479324891|ref|YP_007864941.1|	-	0.094	12.4	0.0	0.23	11.1	0.0	1.6	1	0	0	1	1	1	0	MarR	family
DUF2203	PF09969.4	gi|479324891|ref|YP_007864941.1|	-	0.27	11.4	1.4	16	5.7	0.0	2.3	2	1	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2203)
HpcH_HpaI	PF03328.9	gi|479324892|ref|YP_007864942.1|	-	1.9e-33	115.2	0.0	6e-32	110.3	0.0	2.2	1	1	0	1	1	1	1	HpcH/HpaI	aldolase/citrate	lyase	family
C-C_Bond_Lyase	PF15617.1	gi|479324892|ref|YP_007864942.1|	-	7.1e-18	64.5	0.1	5.4e-09	35.3	0.0	2.2	1	1	0	2	2	2	2	C-C_Bond_Lyase	of	the	TIM-Barrel	fold
BH4	PF02180.12	gi|479324892|ref|YP_007864942.1|	-	0.086	12.3	0.2	0.18	11.3	0.1	1.5	1	0	0	1	1	1	0	Bcl-2	homology	region	4
4HBT	PF03061.17	gi|479324893|ref|YP_007864943.1|	-	2.4e-18	66.0	0.0	3.2e-18	65.6	0.0	1.2	1	0	0	1	1	1	1	Thioesterase	superfamily
4HBT_3	PF13622.1	gi|479324893|ref|YP_007864943.1|	-	2.7e-06	27.3	0.0	3.5e-06	26.9	0.0	1.1	1	0	0	1	1	1	1	Thioesterase-like	superfamily
DUF4442	PF14539.1	gi|479324893|ref|YP_007864943.1|	-	0.0059	16.5	0.0	0.0075	16.2	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4442)
PS-DH	PF14765.1	gi|479324893|ref|YP_007864943.1|	-	0.11	11.6	0.0	0.15	11.1	0.0	1.2	1	0	0	1	1	1	0	Polyketide	synthase	dehydratase
Arch_ATPase	PF01637.13	gi|479324894|ref|YP_007864944.1|	-	1.3e-06	28.2	0.2	2.3e-06	27.4	0.1	1.4	1	0	0	1	1	1	1	Archaeal	ATPase
AAA_14	PF13173.1	gi|479324894|ref|YP_007864944.1|	-	1.5e-05	24.8	0.1	5e-05	23.2	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
Arch_ATPase	PF01637.13	gi|479324895|ref|YP_007864945.1|	-	0.00016	21.4	0.0	0.00016	21.4	0.0	1.0	1	0	0	1	1	1	1	Archaeal	ATPase
Nitrate_red_gam	PF02665.9	gi|479324898|ref|YP_007864948.1|	-	4.2e-70	235.5	19.7	5.1e-70	235.2	13.6	1.0	1	0	0	1	1	1	1	Nitrate	reductase	gamma	subunit
TrbL	PF04610.9	gi|479324898|ref|YP_007864948.1|	-	0.14	11.8	8.4	0.35	10.5	5.8	1.6	1	1	0	1	1	1	0	TrbL/VirB6	plasmid	conjugal	transfer	protein
ResB	PF05140.9	gi|479324898|ref|YP_007864948.1|	-	2.2	6.6	4.2	0.54	8.7	0.8	1.3	1	1	0	1	1	1	0	ResB-like	family
DUF4149	PF13664.1	gi|479324898|ref|YP_007864948.1|	-	5.4	7.1	9.4	0.45	10.5	2.3	2.3	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4149)
Nitrate_red_del	PF02613.10	gi|479324899|ref|YP_007864949.1|	-	1.9e-06	27.7	0.0	3.3e-06	26.9	0.0	1.4	1	1	0	1	1	1	1	Nitrate	reductase	delta	subunit
Big_3	PF07523.7	gi|479324899|ref|YP_007864949.1|	-	0.057	13.4	0.1	0.1	12.6	0.1	1.4	1	0	0	1	1	1	0	Bacterial	Ig-like	domain	(group	3)
Fer4_11	PF13247.1	gi|479324900|ref|YP_007864950.1|	-	3.4e-39	132.7	7.8	3.4e-39	132.7	5.4	1.8	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Nitr_red_bet_C	PF14711.1	gi|479324900|ref|YP_007864950.1|	-	3.7e-22	77.6	0.0	6.3e-22	76.9	0.0	1.4	1	0	0	1	1	1	1	Respiratory	nitrate	reductase	beta	C-terminal
Fer4_6	PF12837.2	gi|479324900|ref|YP_007864950.1|	-	5.2e-10	38.7	21.2	0.005	16.6	0.6	4.4	4	0	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|479324900|ref|YP_007864950.1|	-	1.1e-07	31.5	17.6	6.5e-05	22.6	3.8	3.3	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|479324900|ref|YP_007864950.1|	-	2.8e-07	30.0	18.0	0.00038	20.2	1.1	4.5	4	0	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|479324900|ref|YP_007864950.1|	-	5.6e-07	29.8	19.4	0.0034	17.7	6.4	3.4	2	1	2	4	4	4	4	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|479324900|ref|YP_007864950.1|	-	7.9e-05	22.8	18.9	0.64	10.3	0.1	3.4	2	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|479324900|ref|YP_007864950.1|	-	0.0002	20.8	20.2	0.0044	16.5	1.1	4.6	4	0	0	4	4	4	2	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|479324900|ref|YP_007864950.1|	-	0.0023	18.1	23.0	0.21	12.0	1.0	4.0	4	0	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|479324900|ref|YP_007864950.1|	-	0.016	15.0	17.8	0.099	12.5	0.9	2.8	3	0	0	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|479324900|ref|YP_007864950.1|	-	0.25	11.7	17.7	0.49	10.7	0.2	3.6	2	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|479324900|ref|YP_007864950.1|	-	1.1	9.9	36.3	0.37	11.4	4.9	4.2	4	0	0	4	4	4	0	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|479324900|ref|YP_007864950.1|	-	1.8	9.1	8.6	7.4	7.2	0.0	3.5	3	0	0	3	3	3	0	4Fe-4S	single	cluster	domain
Fer4_16	PF13484.1	gi|479324900|ref|YP_007864950.1|	-	3.6	8.4	17.1	13	6.5	0.3	3.8	2	1	1	3	3	3	0	4Fe-4S	double	cluster	binding	domain
Fer4_8	PF13183.1	gi|479324900|ref|YP_007864950.1|	-	3.7	7.6	18.6	0.43	10.6	0.1	3.4	2	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Molybdopterin	PF00384.17	gi|479324901|ref|YP_007864951.1|	-	4.1e-148	493.6	0.0	5e-148	493.4	0.0	1.1	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase
Molydop_binding	PF01568.16	gi|479324901|ref|YP_007864951.1|	-	9.1e-23	80.1	0.1	2.5e-22	78.7	0.1	1.8	1	0	0	1	1	1	1	Molydopterin	dinucleotide	binding	domain
Nitr_red_alph_N	PF14710.1	gi|479324901|ref|YP_007864951.1|	-	0.0023	18.1	6.8	0.0062	16.7	4.7	1.8	1	0	0	1	1	1	1	Respiratory	nitrate	reductase	alpha	N-terminal
MFS_1	PF07690.11	gi|479324902|ref|YP_007864952.1|	-	7.2e-34	117.0	60.2	4.9e-20	71.5	22.3	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
AMP-binding	PF00501.23	gi|479324903|ref|YP_007864953.1|	-	0.0016	16.8	0.0	0.0021	16.5	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
Apolipoprotein	PF01442.13	gi|479324904|ref|YP_007864954.1|	-	1.9e-06	27.5	9.6	2.8e-06	27.0	6.4	1.6	1	1	0	1	1	1	1	Apolipoprotein	A1/A4/E	domain
UPF0102	PF02021.12	gi|479324904|ref|YP_007864954.1|	-	0.00094	19.0	0.1	0.0029	17.4	0.1	1.8	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0102
DUF4143	PF13635.1	gi|479324904|ref|YP_007864954.1|	-	0.0018	18.3	6.8	0.0026	17.9	4.5	1.4	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
NERD	PF08378.6	gi|479324904|ref|YP_007864954.1|	-	0.0019	18.4	0.2	0.0059	16.8	0.2	1.9	1	0	0	1	1	1	1	Nuclease-related	domain
Dynamin_M	PF01031.15	gi|479324904|ref|YP_007864954.1|	-	0.0055	15.5	10.6	0.17	10.6	4.1	2.3	1	1	1	2	2	2	2	Dynamin	central	region
Prominin	PF05478.6	gi|479324904|ref|YP_007864954.1|	-	0.0067	14.0	3.3	0.0096	13.5	2.3	1.4	1	0	0	1	1	1	1	Prominin
hDGE_amylase	PF14701.1	gi|479324904|ref|YP_007864954.1|	-	0.029	13.2	8.6	0.032	13.1	5.9	1.2	1	0	0	1	1	1	0	glucanotransferase	domain	of	human	glycogen	debranching	enzyme
DUF883	PF05957.8	gi|479324904|ref|YP_007864954.1|	-	0.045	14.1	1.2	0.045	14.1	0.8	2.7	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF883)
Fzo_mitofusin	PF04799.8	gi|479324904|ref|YP_007864954.1|	-	0.063	12.6	8.5	0.22	10.8	1.4	2.6	1	1	1	2	2	2	0	fzo-like	conserved	region
Baculo_PEP_C	PF04513.7	gi|479324904|ref|YP_007864954.1|	-	0.069	12.9	9.5	3.4	7.4	6.6	2.8	1	1	0	1	1	1	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Lectin_N	PF03954.9	gi|479324904|ref|YP_007864954.1|	-	0.15	11.4	5.4	0.15	11.5	2.0	2.2	2	1	1	3	3	3	0	Hepatic	lectin,	N-terminal	domain
Sds3	PF08598.6	gi|479324904|ref|YP_007864954.1|	-	0.17	11.3	19.6	0.02	14.4	8.2	2.2	1	1	1	2	2	2	0	Sds3-like
OmpH	PF03938.9	gi|479324904|ref|YP_007864954.1|	-	0.2	11.6	10.5	0.65	9.9	7.2	1.9	1	1	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
SpoOE-like	PF09388.5	gi|479324904|ref|YP_007864954.1|	-	0.38	10.2	0.1	0.38	10.2	0.1	5.0	4	1	1	5	5	5	0	Spo0E	like	sporulation	regulatory	protein
DUF3502	PF12010.3	gi|479324904|ref|YP_007864954.1|	-	0.4	10.6	5.4	0.42	10.5	2.7	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3502)
ApoLp-III	PF07464.6	gi|479324904|ref|YP_007864954.1|	-	0.44	10.5	15.6	5.9	6.8	10.7	2.8	1	1	0	1	1	1	0	Apolipophorin-III	precursor	(apoLp-III)
Exonuc_VII_L	PF02601.10	gi|479324904|ref|YP_007864954.1|	-	1.7	7.7	9.9	2.6	7.1	6.8	1.5	1	1	0	1	1	1	0	Exonuclease	VII,	large	subunit
DUF1706	PF08020.6	gi|479324904|ref|YP_007864954.1|	-	3.2	7.2	9.7	11	5.5	0.1	3.0	1	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1706)
CENP-Q	PF13094.1	gi|479324904|ref|YP_007864954.1|	-	3.9	7.4	13.6	6.3	6.8	8.9	1.8	1	1	0	1	1	1	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
Atg14	PF10186.4	gi|479324904|ref|YP_007864954.1|	-	4.4	6.1	12.4	6.3	5.6	8.6	1.3	1	0	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
Caudo_TAP	PF02413.12	gi|479324904|ref|YP_007864954.1|	-	4.6	7.4	11.7	9.6	6.3	4.1	3.3	2	1	1	3	3	3	0	Caudovirales	tail	fibre	assembly	protein
Phage_Gp23	PF10669.4	gi|479324904|ref|YP_007864954.1|	-	6.3	6.9	14.4	0.3	11.2	2.0	3.0	2	1	1	3	3	3	0	Protein	gp23	(Bacteriophage	A118)
Phosphorylase	PF00343.15	gi|479324905|ref|YP_007864955.1|	-	7.6e-11	40.6	0.0	1.4e-10	39.7	0.0	1.4	1	0	0	1	1	1	1	Carbohydrate	phosphorylase
Glycos_transf_1	PF00534.15	gi|479324905|ref|YP_007864955.1|	-	4.2e-08	32.8	0.0	2.7e-07	30.1	0.0	2.0	1	1	1	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|479324905|ref|YP_007864955.1|	-	4.6e-06	26.8	0.0	2.4e-05	24.4	0.0	2.1	3	0	0	3	3	3	1	Glycosyl	transferases	group	1
FF	PF01846.14	gi|479324906|ref|YP_007864956.1|	-	0.023	14.6	0.2	0.069	13.1	0.1	1.9	1	0	0	1	1	1	0	FF	domain
Flavin_Reduct	PF01613.13	gi|479324907|ref|YP_007864957.1|	-	3.5e-23	82.1	0.0	4.2e-23	81.8	0.0	1.0	1	0	0	1	1	1	1	Flavin	reductase	like	domain
NTP_transf_2	PF01909.18	gi|479324908|ref|YP_007864958.1|	-	2.2e-10	40.7	2.3	4.9e-10	39.5	1.6	1.7	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
DUF294	PF03445.8	gi|479324908|ref|YP_007864958.1|	-	0.0027	17.3	0.0	0.055	13.0	0.0	2.0	2	0	0	2	2	2	1	Putative	nucleotidyltransferase	DUF294
HEPN	PF05168.9	gi|479324909|ref|YP_007864959.1|	-	4.6e-22	78.1	1.1	5.7e-22	77.8	0.8	1.1	1	0	0	1	1	1	1	HEPN	domain
TPR_10	PF13374.1	gi|479324909|ref|YP_007864959.1|	-	0.069	13.1	0.2	5.3	7.1	0.0	2.4	2	0	0	2	2	2	0	Tetratricopeptide	repeat
COX2	PF00116.15	gi|479324910|ref|YP_007864960.1|	-	6.9e-07	29.1	0.1	0.0001	22.0	0.0	2.3	1	1	1	2	2	2	2	Cytochrome	C	oxidase	subunit	II,	periplasmic	domain
Cupredoxin_1	PF13473.1	gi|479324910|ref|YP_007864960.1|	-	3e-05	23.8	0.0	0.00055	19.7	0.0	2.3	1	1	0	1	1	1	1	Cupredoxin-like	domain
Cas_NE0113	PF09623.5	gi|479324911|ref|YP_007864961.1|	-	1.4e-14	54.0	0.0	3e-14	53.0	0.0	1.4	1	1	0	1	1	1	1	CRISPR-associated	protein	NE0113	(Cas_NE0113)
Cas_Cas02710	PF09670.5	gi|479324911|ref|YP_007864961.1|	-	0.0039	15.8	0.0	0.0043	15.7	0.0	1.2	1	0	0	1	1	1	1	CRISPR-associated	protein	(Cas_Cas02710)
DUF2103	PF09876.4	gi|479324911|ref|YP_007864961.1|	-	0.042	13.6	0.6	6.5	6.5	0.0	2.3	2	0	0	2	2	2	0	Predicted	metal-binding	protein	(DUF2103)
SIS_2	PF13580.1	gi|479324911|ref|YP_007864961.1|	-	0.045	13.4	0.1	0.067	12.9	0.1	1.3	1	0	0	1	1	1	0	SIS	domain
tRNA_m1G_MT	PF01746.16	gi|479324911|ref|YP_007864961.1|	-	0.048	13.2	0.0	0.072	12.6	0.0	1.3	1	0	0	1	1	1	0	tRNA	(Guanine-1)-methyltransferase
Rieske	PF00355.21	gi|479324912|ref|YP_007864962.1|	-	1.6e-13	49.9	0.0	1.9e-13	49.7	0.0	1.1	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Rieske_2	PF13806.1	gi|479324912|ref|YP_007864962.1|	-	6.5e-11	41.8	0.0	8.3e-11	41.5	0.0	1.1	1	0	0	1	1	1	1	Rieske-like	[2Fe-2S]	domain
Ferritin	PF00210.19	gi|479324913|ref|YP_007864963.1|	-	4e-20	72.0	0.4	5e-20	71.7	0.3	1.1	1	0	0	1	1	1	1	Ferritin-like	domain
Rubrerythrin	PF02915.12	gi|479324913|ref|YP_007864963.1|	-	5.2e-06	26.8	0.2	6.5e-06	26.5	0.2	1.1	1	0	0	1	1	1	1	Rubrerythrin
DUF4439	PF14530.1	gi|479324913|ref|YP_007864963.1|	-	0.01	16.2	0.2	1.3	9.5	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4439)
Nramp	PF01566.13	gi|479324914|ref|YP_007864964.1|	-	2.8e-34	118.4	23.0	6e-34	117.3	16.0	1.4	1	1	0	1	1	1	1	Natural	resistance-associated	macrophage	protein
AAA_14	PF13173.1	gi|479324915|ref|YP_007864965.1|	-	1.2e-31	109.2	0.7	2.3e-31	108.3	0.1	1.7	2	0	0	2	2	2	1	AAA	domain
DUF4143	PF13635.1	gi|479324915|ref|YP_007864965.1|	-	7.6e-13	48.4	0.1	1.4e-12	47.6	0.1	1.5	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
Arch_ATPase	PF01637.13	gi|479324915|ref|YP_007864965.1|	-	2.3e-08	34.0	2.6	0.0034	17.1	0.1	2.8	2	1	1	3	3	3	2	Archaeal	ATPase
HTH_IclR	PF09339.5	gi|479324915|ref|YP_007864965.1|	-	0.012	15.2	0.0	0.024	14.2	0.0	1.5	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_23	PF13384.1	gi|479324915|ref|YP_007864965.1|	-	0.014	15.0	0.1	0.034	13.7	0.1	1.7	1	0	0	1	1	1	0	Homeodomain-like	domain
AAA_17	PF13207.1	gi|479324915|ref|YP_007864965.1|	-	0.021	15.6	0.0	0.07	13.9	0.0	1.9	1	0	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|479324915|ref|YP_007864965.1|	-	0.053	13.7	0.0	0.13	12.4	0.0	1.7	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.1	gi|479324915|ref|YP_007864965.1|	-	0.17	11.8	0.0	0.54	10.2	0.0	1.8	1	1	0	1	1	1	0	AAA	ATPase	domain
tRNA_SAD	PF07973.9	gi|479324916|ref|YP_007864966.1|	-	0.075	12.9	0.0	0.17	11.7	0.0	1.6	1	0	0	1	1	1	0	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
MFS_1	PF07690.11	gi|479324917|ref|YP_007864967.1|	-	1.8e-16	59.8	33.8	6.4e-10	38.2	11.0	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|479324917|ref|YP_007864967.1|	-	2.8e-06	26.1	12.4	2.8e-06	26.1	8.6	2.4	2	1	1	3	3	3	2	Sugar	(and	other)	transporter
PaREP1	PF05942.6	gi|479324918|ref|YP_007864968.1|	-	1.4e-25	89.4	0.0	1.7e-25	89.1	0.0	1.1	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
AAA_31	PF13614.1	gi|479324920|ref|YP_007864970.1|	-	1.2e-11	44.7	0.2	6.5e-11	42.4	0.1	2.2	1	1	1	2	2	2	1	AAA	domain
CbiA	PF01656.18	gi|479324920|ref|YP_007864970.1|	-	2.5e-11	43.3	3.0	2.4e-10	40.1	2.1	2.1	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ArsA_ATPase	PF02374.10	gi|479324920|ref|YP_007864970.1|	-	0.00024	20.2	1.9	0.00062	18.8	0.0	2.3	3	0	0	3	3	3	1	Anion-transporting	ATPase
MipZ	PF09140.6	gi|479324920|ref|YP_007864970.1|	-	0.00053	19.1	0.1	0.3	10.1	0.0	2.7	3	0	0	3	3	3	2	ATPase	MipZ
UPF0184	PF03670.8	gi|479324921|ref|YP_007864971.1|	-	0.085	13.0	0.3	0.12	12.5	0.2	1.4	1	1	0	1	1	1	0	Uncharacterised	protein	family	(UPF0184)
NAD_binding_2	PF03446.10	gi|479324922|ref|YP_007864972.1|	-	1.6e-53	180.9	0.7	2e-53	180.5	0.1	1.4	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_binding_11	PF14833.1	gi|479324922|ref|YP_007864972.1|	-	1.7e-34	118.5	0.7	2.3e-34	118.0	0.5	1.2	1	0	0	1	1	1	1	NAD-binding	of	NADP-dependent	3-hydroxyisobutyrate	dehydrogenase
F420_oxidored	PF03807.12	gi|479324922|ref|YP_007864972.1|	-	5.6e-08	33.1	0.2	1.8e-07	31.4	0.0	2.0	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
2-Hacid_dh_C	PF02826.14	gi|479324922|ref|YP_007864972.1|	-	1.5e-06	27.5	0.0	8.6e-06	25.0	0.0	2.1	2	1	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Shikimate_DH	PF01488.15	gi|479324922|ref|YP_007864972.1|	-	0.00071	19.6	0.0	0.0015	18.5	0.0	1.6	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
3HCDH_N	PF02737.13	gi|479324922|ref|YP_007864972.1|	-	0.0043	16.7	0.2	0.018	14.6	0.1	2.1	2	1	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
DapB_N	PF01113.15	gi|479324922|ref|YP_007864972.1|	-	0.0056	16.5	0.0	0.019	14.8	0.0	1.9	2	0	0	2	2	2	1	Dihydrodipicolinate	reductase,	N-terminus
ApbA	PF02558.11	gi|479324922|ref|YP_007864972.1|	-	0.0075	15.7	0.0	0.014	14.8	0.0	1.5	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
IlvN	PF07991.7	gi|479324922|ref|YP_007864972.1|	-	0.0095	15.3	0.0	0.019	14.3	0.0	1.5	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
UDPG_MGDP_dh_N	PF03721.9	gi|479324922|ref|YP_007864972.1|	-	0.02	14.3	0.0	0.048	13.0	0.0	1.7	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
HTH_34	PF13601.1	gi|479324923|ref|YP_007864973.1|	-	0.00048	20.1	0.4	0.0084	16.1	0.1	2.6	3	0	0	3	3	3	1	Winged	helix	DNA-binding	domain
MarR	PF01047.17	gi|479324923|ref|YP_007864973.1|	-	0.0013	18.3	0.2	0.0022	17.6	0.1	1.3	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.1	gi|479324923|ref|YP_007864973.1|	-	0.0056	16.0	0.0	0.021	14.1	0.1	1.9	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_20	PF12840.2	gi|479324923|ref|YP_007864973.1|	-	0.014	15.1	0.0	0.023	14.4	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
Dexa_ind	PF15198.1	gi|479324923|ref|YP_007864973.1|	-	0.032	14.1	1.6	0.047	13.5	0.2	1.9	2	1	0	2	2	2	0	Dexamethasone-induced
HTH_27	PF13463.1	gi|479324923|ref|YP_007864973.1|	-	0.084	13.2	0.0	0.32	11.3	0.0	2.0	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
Fe_dep_repress	PF01325.14	gi|479324923|ref|YP_007864973.1|	-	0.088	12.7	0.0	0.18	11.7	0.0	1.5	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DUF1286	PF06939.6	gi|479324924|ref|YP_007864974.1|	-	3.6e-11	43.2	1.2	4.2e-11	43.0	0.8	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1286)
DUF457	PF04307.9	gi|479324924|ref|YP_007864974.1|	-	0.18	11.1	0.5	0.21	10.9	0.4	1.1	1	0	0	1	1	1	0	Predicted	membrane-bound	metal-dependent	hydrolase	(DUF457)
Arch_ATPase	PF01637.13	gi|479324925|ref|YP_007864975.1|	-	1.8e-27	96.6	0.8	1.8e-27	96.6	0.5	1.9	2	0	0	2	2	2	1	Archaeal	ATPase
AAA_14	PF13173.1	gi|479324925|ref|YP_007864975.1|	-	3.7e-08	33.3	3.0	1.2e-06	28.4	0.6	3.1	2	1	0	2	2	2	1	AAA	domain
NTPase_1	PF03266.10	gi|479324925|ref|YP_007864975.1|	-	1e-06	28.5	0.6	1e-06	28.5	0.4	1.6	2	0	0	2	2	2	1	NTPase
AAA_16	PF13191.1	gi|479324925|ref|YP_007864975.1|	-	3.6e-06	27.1	0.0	1.8e-05	24.8	0.0	2.0	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|479324925|ref|YP_007864975.1|	-	2.1e-05	24.6	0.1	8.2e-05	22.7	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
AAA_35	PF14516.1	gi|479324925|ref|YP_007864975.1|	-	4.4e-05	22.2	0.1	0.00011	21.0	0.0	1.6	1	0	0	1	1	1	1	AAA-like	domain
AAA	PF00004.24	gi|479324925|ref|YP_007864975.1|	-	0.0012	19.0	0.1	0.0038	17.4	0.1	1.8	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
NB-ARC	PF00931.17	gi|479324925|ref|YP_007864975.1|	-	0.0015	17.4	0.5	0.0024	16.8	0.1	1.5	2	0	0	2	2	2	1	NB-ARC	domain
NACHT	PF05729.7	gi|479324925|ref|YP_007864975.1|	-	0.016	14.8	0.0	0.039	13.6	0.0	1.7	1	1	0	1	1	1	0	NACHT	domain
TIR	PF01582.15	gi|479324925|ref|YP_007864975.1|	-	0.034	13.6	2.1	1.4	8.3	0.1	2.3	2	0	0	2	2	2	0	TIR	domain
DUF815	PF05673.8	gi|479324925|ref|YP_007864975.1|	-	0.071	12.0	0.7	0.16	10.8	0.1	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF815)
TK	PF00265.13	gi|479324925|ref|YP_007864975.1|	-	0.09	12.3	0.1	0.18	11.3	0.1	1.4	1	0	0	1	1	1	0	Thymidine	kinase
HTH_32	PF13565.1	gi|479324927|ref|YP_007864977.1|	-	0.11	13.2	0.2	0.21	12.4	0.1	1.5	1	0	0	1	1	1	0	Homeodomain-like	domain
DUF4110	PF13422.1	gi|479324927|ref|YP_007864977.1|	-	0.19	11.5	3.0	0.3	10.9	2.1	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4110)
zf-LITAF-like	PF10601.4	gi|479324928|ref|YP_007864978.1|	-	0.51	10.2	2.9	0.68	9.8	2.0	1.3	1	0	0	1	1	1	0	LITAF-like	zinc	ribbon	domain
Cas_NE0113	PF09623.5	gi|479324930|ref|YP_007864980.1|	-	4e-05	23.1	0.0	4.7e-05	22.9	0.0	1.1	1	0	0	1	1	1	1	CRISPR-associated	protein	NE0113	(Cas_NE0113)
DUF2103	PF09876.4	gi|479324930|ref|YP_007864980.1|	-	0.086	12.6	0.0	0.13	12.0	0.0	1.2	1	0	0	1	1	1	0	Predicted	metal-binding	protein	(DUF2103)
DUF2371	PF10177.4	gi|479324931|ref|YP_007864981.1|	-	0.0018	18.1	4.8	0.012	15.5	0.1	2.2	2	0	0	2	2	2	1	Uncharacterised	conserved	protein	(DUF2371)
DUF1469	PF07332.6	gi|479324931|ref|YP_007864981.1|	-	0.068	12.9	9.6	0.89	9.2	1.6	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1469)
DUF4418	PF14387.1	gi|479324931|ref|YP_007864981.1|	-	0.25	11.0	6.7	1	9.1	1.0	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4418)
Cation_ATPase_C	PF00689.16	gi|479324931|ref|YP_007864981.1|	-	0.27	10.7	4.6	0.49	9.8	3.2	1.5	1	1	0	1	1	1	0	Cation	transporting	ATPase,	C-terminus
NfeD	PF01957.13	gi|479324931|ref|YP_007864981.1|	-	0.27	11.3	9.5	0.77	9.8	0.4	2.2	2	0	0	2	2	2	0	NfeD-like	C-terminal,	partner-binding
Neurensin	PF14927.1	gi|479324931|ref|YP_007864981.1|	-	0.61	9.4	9.7	2.6	7.4	1.0	2.2	2	0	0	2	2	2	0	Neurensin
DUF3185	PF11381.3	gi|479324931|ref|YP_007864981.1|	-	0.64	9.8	16.0	0.13	12.0	2.8	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3185)
Tetraspannin	PF00335.15	gi|479324931|ref|YP_007864981.1|	-	1	8.5	6.0	0.7	9.1	0.2	2.0	2	0	0	2	2	2	0	Tetraspanin	family
Claudin_2	PF13903.1	gi|479324931|ref|YP_007864981.1|	-	1.2	8.8	8.1	0.98	9.0	1.4	2.1	2	0	0	2	2	2	0	PMP-22/EMP/MP20/Claudin	tight	junction
DUF3611	PF12263.3	gi|479324931|ref|YP_007864981.1|	-	2.3	7.5	7.1	1	8.7	0.5	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3611)
DUF3784	PF12650.2	gi|479324931|ref|YP_007864981.1|	-	2.8	7.9	8.2	12	5.9	0.1	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3784)
DUF3139	PF11337.3	gi|479324931|ref|YP_007864981.1|	-	3.3	8.0	8.0	6.2	7.1	1.7	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3139)
Metallophos_3	PF14582.1	gi|479324932|ref|YP_007864982.1|	-	2.3e-08	33.5	0.1	1e-06	28.1	0.0	2.4	2	0	0	2	2	2	1	Metallophosphoesterase,	calcineurin	superfamily
Metallophos_2	PF12850.2	gi|479324932|ref|YP_007864982.1|	-	2.5e-07	30.6	0.0	4.7e-06	26.5	0.0	2.2	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|479324932|ref|YP_007864982.1|	-	0.027	13.8	0.0	0.3	10.4	0.0	2.1	2	0	0	2	2	2	0	Calcineurin-like	phosphoesterase
HIGH_NTase1	PF05636.6	gi|479324932|ref|YP_007864982.1|	-	0.046	12.7	0.3	0.31	10.0	0.0	2.0	2	0	0	2	2	2	0	HIGH	Nucleotidyl	Transferase
DLH	PF01738.13	gi|479324933|ref|YP_007864983.1|	-	2.4e-78	262.3	0.0	3.2e-78	261.9	0.0	1.2	1	0	0	1	1	1	1	Dienelactone	hydrolase	family
Abhydrolase_5	PF12695.2	gi|479324933|ref|YP_007864983.1|	-	9.5e-12	44.8	0.0	2.3e-11	43.6	0.0	1.6	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_6	PF12697.2	gi|479324933|ref|YP_007864983.1|	-	8.8e-06	25.7	0.0	0.034	14.0	0.0	2.2	1	1	1	2	2	2	2	Alpha/beta	hydrolase	family
Abhydrolase_2	PF02230.11	gi|479324933|ref|YP_007864983.1|	-	1.3e-05	24.7	0.0	2e-05	24.1	0.0	1.3	1	0	0	1	1	1	1	Phospholipase/Carboxylesterase
Abhydrolase_3	PF07859.8	gi|479324933|ref|YP_007864983.1|	-	0.0099	15.4	0.0	0.29	10.6	0.0	2.3	1	1	1	2	2	2	1	alpha/beta	hydrolase	fold
Abhydrolase_1	PF00561.15	gi|479324933|ref|YP_007864983.1|	-	0.023	14.2	0.2	0.15	11.6	0.1	2.0	1	1	0	2	2	2	0	alpha/beta	hydrolase	fold
Chlorophyllase2	PF12740.2	gi|479324933|ref|YP_007864983.1|	-	0.027	13.3	0.0	0.045	12.6	0.0	1.5	1	1	0	1	1	1	0	Chlorophyllase	enzyme
BAAT_C	PF08840.6	gi|479324933|ref|YP_007864983.1|	-	0.034	13.8	0.4	10	5.7	0.0	2.9	3	0	0	3	3	3	0	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
Peptidase_S9	PF00326.16	gi|479324933|ref|YP_007864983.1|	-	0.052	12.7	0.0	2.4	7.3	0.0	2.3	2	0	0	2	2	2	0	Prolyl	oligopeptidase	family
Val_tRNA-synt_C	PF10458.4	gi|479324933|ref|YP_007864983.1|	-	0.08	13.0	0.0	0.17	11.9	0.0	1.5	1	0	0	1	1	1	0	Valyl	tRNA	synthetase	tRNA	binding	arm
Connexin43	PF03508.8	gi|479324933|ref|YP_007864983.1|	-	0.13	11.5	0.2	0.25	10.6	0.1	1.4	1	0	0	1	1	1	0	Gap	junction	alpha-1	protein	(Cx43)
Pro-kuma_activ	PF09286.6	gi|479324934|ref|YP_007864984.1|	-	9.1e-21	74.4	0.0	1.5e-20	73.7	0.0	1.3	1	0	0	1	1	1	1	Pro-kumamolisin,	activation	domain
TENA_THI-4	PF03070.11	gi|479324935|ref|YP_007864985.1|	-	1.6e-32	113.0	0.0	1.9e-32	112.7	0.0	1.0	1	0	0	1	1	1	1	TENA/THI-4/PQQC	family
Ald_Xan_dh_C2	PF02738.13	gi|479324936|ref|YP_007864986.1|	-	1.6e-119	399.7	0.0	2.2e-119	399.2	0.0	1.1	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|479324936|ref|YP_007864986.1|	-	1.2e-24	86.5	0.0	2.3e-24	85.6	0.0	1.5	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
DUF4064	PF13273.1	gi|479324937|ref|YP_007864987.1|	-	0.013	15.5	12.3	0.12	12.5	1.5	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4064)
DUF4184	PF13803.1	gi|479324937|ref|YP_007864987.1|	-	0.071	12.4	0.9	0.093	12.0	0.1	1.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4184)
Ninjurin	PF04923.7	gi|479324937|ref|YP_007864987.1|	-	0.11	12.2	2.8	4.1	7.1	0.0	2.3	2	0	0	2	2	2	0	Ninjurin
DUF2755	PF10954.3	gi|479324937|ref|YP_007864987.1|	-	0.46	10.2	6.6	3.2	7.5	0.2	2.9	1	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2755)
DUF95	PF01944.12	gi|479324937|ref|YP_007864987.1|	-	1.3	8.5	14.8	6.5	6.3	1.4	2.2	1	1	1	2	2	2	0	Integral	membrane	protein	DUF95
Alpha-amylase	PF00128.19	gi|479324938|ref|YP_007864988.1|	-	2.2e-37	129.1	1.3	4.7e-24	85.3	0.1	3.1	1	1	1	2	2	2	2	Alpha	amylase,	catalytic	domain
Alpha-amyl_C	PF09071.5	gi|479324938|ref|YP_007864988.1|	-	3.4e-28	97.2	0.1	8.2e-28	95.9	0.1	1.7	1	0	0	1	1	1	1	Alpha-amylase,	C	terminal
CBM_48	PF02922.13	gi|479324938|ref|YP_007864988.1|	-	2.9e-08	33.6	0.0	8.9e-08	32.0	0.0	1.9	1	0	0	1	1	1	1	Carbohydrate-binding	module	48	(Isoamylase	N-terminal	domain)
Alpha-amylase	PF00128.19	gi|479324939|ref|YP_007864989.1|	-	1.6e-20	73.7	0.1	2.8e-18	66.3	0.1	3.1	1	1	0	1	1	1	1	Alpha	amylase,	catalytic	domain
CBM_48	PF02922.13	gi|479324939|ref|YP_007864989.1|	-	2.5e-18	65.8	0.0	9e-18	64.1	0.0	2.0	2	0	0	2	2	2	1	Carbohydrate-binding	module	48	(Isoamylase	N-terminal	domain)
Alpha-amylase_C	PF02806.13	gi|479324939|ref|YP_007864989.1|	-	0.0067	16.5	0.0	0.019	15.0	0.0	1.8	1	0	0	1	1	1	1	Alpha	amylase,	C-terminal	all-beta	domain
Alpha-amylase	PF00128.19	gi|479324940|ref|YP_007864990.1|	-	8.9e-25	87.7	5.4	3.9e-21	75.7	0.5	3.3	3	1	0	3	3	3	3	Alpha	amylase,	catalytic	domain
Tricorn_PDZ	PF14685.1	gi|479324941|ref|YP_007864991.1|	-	1.2e-23	82.7	0.2	2.3e-23	81.7	0.1	1.5	1	0	0	1	1	1	1	Tricorn	protease	PDZ	domain
Peptidase_S41	PF03572.13	gi|479324941|ref|YP_007864991.1|	-	1.6e-23	82.9	0.0	7.5e-23	80.7	0.0	2.1	2	0	0	2	2	2	1	Peptidase	family	S41
Tricorn_C1	PF14684.1	gi|479324941|ref|YP_007864991.1|	-	3.4e-21	74.9	2.7	6.8e-21	73.9	1.9	1.5	1	0	0	1	1	1	1	Tricorn	protease	C1	domain
PD40	PF07676.7	gi|479324941|ref|YP_007864991.1|	-	1.6e-09	37.2	4.5	5.1e-05	22.8	0.0	6.1	6	0	0	6	6	6	2	WD40-like	Beta	Propeller	Repeat
PB1	PF00564.19	gi|479324941|ref|YP_007864991.1|	-	0.045	13.4	0.3	0.34	10.6	0.1	2.3	2	0	0	2	2	2	0	PB1	domain
RibD_C	PF01872.12	gi|479324942|ref|YP_007864992.1|	-	1.8e-54	184.4	0.0	2e-54	184.2	0.0	1.0	1	0	0	1	1	1	1	RibD	C-terminal	domain
Imm19	PF15567.1	gi|479324943|ref|YP_007864993.1|	-	0.053	13.5	0.0	0.071	13.1	0.0	1.3	1	0	0	1	1	1	0	Immunity	protein	19
TRAM	PF01938.15	gi|479324943|ref|YP_007864993.1|	-	0.075	12.8	0.4	2.8	7.7	0.0	2.2	1	1	1	2	2	2	0	TRAM	domain
WYL	PF13280.1	gi|479324944|ref|YP_007864994.1|	-	0.024	14.5	0.6	0.026	14.4	0.4	1.1	1	0	0	1	1	1	0	WYL	domain
rve_2	PF13333.1	gi|479324944|ref|YP_007864994.1|	-	0.025	14.6	4.1	0.2	11.7	2.8	2.2	1	1	0	1	1	1	0	Integrase	core	domain
DUF973	PF06157.6	gi|479324946|ref|YP_007864996.1|	-	2.4e-81	272.8	31.3	2.7e-81	272.6	21.7	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
DUF2484	PF10658.4	gi|479324946|ref|YP_007864996.1|	-	1.7	8.8	7.3	8.7	6.5	0.1	2.8	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2484)
DUF3317	PF11779.3	gi|479324946|ref|YP_007864996.1|	-	3.4	7.1	9.2	1.2	8.5	0.2	3.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3317)
OrfB_Zn_ribbon	PF07282.6	gi|479327027|ref|YP_007864999.1|	-	3.4e-21	74.6	0.5	1e-20	73.1	0.2	2.0	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|479327027|ref|YP_007864999.1|	-	7.8e-09	35.2	0.4	1.3e-08	34.5	0.3	1.3	1	0	0	1	1	1	1	Probable	transposase
zf-RING_4	PF14570.1	gi|479327027|ref|YP_007864999.1|	-	0.069	12.7	2.8	0.075	12.6	1.1	1.6	2	0	0	2	2	2	0	RING/Ubox	like	zinc-binding	domain
VKOR	PF07884.9	gi|479324949|ref|YP_007865000.1|	-	5.4e-12	45.7	15.6	5.8e-12	45.6	10.8	1.0	1	0	0	1	1	1	1	Vitamin	K	epoxide	reductase	family
PIN_4	PF13638.1	gi|479324950|ref|YP_007865001.1|	-	0.02	14.9	0.2	0.021	14.9	0.1	1.1	1	0	0	1	1	1	0	PIN	domain
Peptidase_C15	PF01470.12	gi|479324951|ref|YP_007865002.1|	-	2.6e-51	174.3	0.0	2.9e-51	174.1	0.0	1.0	1	0	0	1	1	1	1	Pyroglutamyl	peptidase
Reo_sigmaC	PF04582.7	gi|479324952|ref|YP_007865003.1|	-	3.1e-11	43.0	9.8	6.1e-06	25.6	1.7	2.1	1	1	1	2	2	2	2	Reovirus	sigma	C	capsid	protein
DUF16	PF01519.11	gi|479324952|ref|YP_007865003.1|	-	4e-09	36.5	32.7	0.00014	21.9	6.9	3.9	2	1	2	4	4	3	3	Protein	of	unknown	function	DUF16
Fib_alpha	PF08702.5	gi|479324952|ref|YP_007865003.1|	-	2.1e-08	34.4	19.8	0.0013	18.9	4.7	3.3	1	1	1	2	2	2	2	Fibrinogen	alpha/beta	chain	family
IncA	PF04156.9	gi|479324952|ref|YP_007865003.1|	-	5.9e-07	29.2	21.1	0.00066	19.3	7.8	2.1	1	1	1	2	2	2	2	IncA	protein
SlyX	PF04102.7	gi|479324952|ref|YP_007865003.1|	-	8.4e-07	29.2	17.3	0.018	15.3	0.9	3.6	1	1	2	3	3	3	3	SlyX
DUF3972	PF13118.1	gi|479324952|ref|YP_007865003.1|	-	8.7e-07	29.0	20.4	0.012	15.6	1.4	3.8	2	1	3	5	5	4	4	Protein	of	unknown	function	(DUF3972)
AAA_13	PF13166.1	gi|479324952|ref|YP_007865003.1|	-	1.9e-06	26.6	22.2	6.9e-06	24.8	15.4	1.8	1	1	0	1	1	1	1	AAA	domain
DUF4175	PF13779.1	gi|479324952|ref|YP_007865003.1|	-	4.5e-06	24.6	13.5	0.042	11.5	0.9	3.0	1	1	2	3	3	3	3	Domain	of	unknown	function	(DUF4175)
Lebercilin	PF15619.1	gi|479324952|ref|YP_007865003.1|	-	8.4e-06	25.3	19.1	1.8e-05	24.2	13.2	1.6	1	1	0	1	1	1	1	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
ALIX_LYPXL_bnd	PF13949.1	gi|479324952|ref|YP_007865003.1|	-	9.9e-06	24.7	20.0	0.0023	16.9	3.7	2.2	1	1	1	2	2	2	2	ALIX	V-shaped	domain	binding	to	HIV
Fusion_gly	PF00523.13	gi|479324952|ref|YP_007865003.1|	-	2.8e-05	22.3	19.0	0.029	12.4	2.0	3.4	1	1	2	3	3	3	3	Fusion	glycoprotein	F0
DUF948	PF06103.6	gi|479324952|ref|YP_007865003.1|	-	3.3e-05	23.6	18.9	0.0015	18.3	4.4	3.1	1	1	3	4	4	4	3	Bacterial	protein	of	unknown	function	(DUF948)
Cast	PF10174.4	gi|479324952|ref|YP_007865003.1|	-	8.2e-05	20.8	18.3	0.00017	19.8	12.7	1.4	1	1	0	1	1	1	1	RIM-binding	protein	of	the	cytomatrix	active	zone
DUF3584	PF12128.3	gi|479324952|ref|YP_007865003.1|	-	8.8e-05	20.0	13.2	0.00012	19.6	9.2	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3584)
Atg14	PF10186.4	gi|479324952|ref|YP_007865003.1|	-	9.7e-05	21.4	21.8	0.0022	17.0	6.9	2.1	1	1	1	2	2	2	2	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
GAT	PF03127.9	gi|479324952|ref|YP_007865003.1|	-	0.0001	22.2	11.4	0.062	13.2	1.2	2.5	1	1	1	2	2	2	2	GAT	domain
TMEM192	PF14802.1	gi|479324952|ref|YP_007865003.1|	-	0.0001	21.2	12.9	0.13	11.0	0.2	3.3	1	1	2	3	3	3	2	TMEM192	family
BLOC1_2	PF10046.4	gi|479324952|ref|YP_007865003.1|	-	0.00012	22.1	19.6	0.026	14.6	3.2	2.7	1	1	1	2	2	2	2	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
DUF1664	PF07889.7	gi|479324952|ref|YP_007865003.1|	-	0.00012	21.8	18.0	0.0038	17.0	5.6	2.8	1	1	2	3	3	3	3	Protein	of	unknown	function	(DUF1664)
NPV_P10	PF05531.7	gi|479324952|ref|YP_007865003.1|	-	0.00012	22.2	19.7	0.014	15.6	4.5	3.6	1	1	2	3	3	3	2	Nucleopolyhedrovirus	P10	protein
ATG16	PF08614.6	gi|479324952|ref|YP_007865003.1|	-	0.00012	21.9	20.1	0.031	14.1	6.5	2.4	1	1	1	2	2	2	2	Autophagy	protein	16	(ATG16)
ADIP	PF11559.3	gi|479324952|ref|YP_007865003.1|	-	0.00013	21.9	22.0	0.042	13.7	8.1	2.3	1	1	1	2	2	2	2	Afadin-	and	alpha	-actinin-Binding
DUF1626	PF07788.6	gi|479324952|ref|YP_007865003.1|	-	0.00013	21.6	5.0	0.00016	21.3	2.1	2.1	1	1	1	2	2	1	1	Protein	of	unknown	function	(DUF1626)
MCPsignal	PF00015.16	gi|479324952|ref|YP_007865003.1|	-	0.00015	21.3	20.4	0.0013	18.2	9.4	2.0	1	1	1	2	2	2	2	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
DUF2383	PF09537.5	gi|479324952|ref|YP_007865003.1|	-	0.00019	21.6	13.2	0.084	13.1	1.0	3.5	1	1	2	3	3	3	1	Domain	of	unknown	function	(DUF2383)
Tropomyosin	PF00261.15	gi|479324952|ref|YP_007865003.1|	-	0.00019	20.5	18.3	0.00034	19.7	12.7	1.3	1	0	0	1	1	1	1	Tropomyosin
WEMBL	PF05701.6	gi|479324952|ref|YP_007865003.1|	-	0.00021	19.9	20.8	0.0003	19.4	14.4	1.2	1	0	0	1	1	1	1	Weak	chloroplast	movement	under	blue	light
EzrA	PF06160.7	gi|479324952|ref|YP_007865003.1|	-	0.00022	19.5	20.4	0.017	13.2	7.2	1.9	1	1	1	2	2	2	2	Septation	ring	formation	regulator,	EzrA
SNARE	PF05739.14	gi|479324952|ref|YP_007865003.1|	-	0.00027	20.5	15.5	0.74	9.5	0.3	4.6	1	1	3	4	4	4	1	SNARE	domain
AAA_27	PF13514.1	gi|479324952|ref|YP_007865003.1|	-	0.00038	18.3	14.5	0.0005	17.9	10.0	1.1	1	0	0	1	1	1	1	AAA	domain
DUF1296	PF06972.6	gi|479324952|ref|YP_007865003.1|	-	0.00051	19.9	5.6	0.51	10.3	0.2	3.8	1	1	2	3	3	3	1	Protein	of	unknown	function	(DUF1296)
DUF848	PF05852.6	gi|479324952|ref|YP_007865003.1|	-	0.0006	19.6	16.3	0.15	11.9	1.8	2.5	1	1	1	2	2	2	2	Gammaherpesvirus	protein	of	unknown	function	(DUF848)
BRO1	PF03097.13	gi|479324952|ref|YP_007865003.1|	-	0.00065	18.5	14.1	0.04	12.6	2.0	2.8	1	1	2	3	3	3	2	BRO1-like	domain
TPR_1	PF00515.23	gi|479324952|ref|YP_007865003.1|	-	0.0009	18.7	2.8	57	3.5	0.1	6.1	2	1	5	7	7	6	0	Tetratricopeptide	repeat
Corona_S2	PF01601.11	gi|479324952|ref|YP_007865003.1|	-	0.00094	17.4	13.7	0.19	9.7	0.6	3.0	1	1	1	2	2	2	2	Coronavirus	S2	glycoprotein
FliJ	PF02050.11	gi|479324952|ref|YP_007865003.1|	-	0.0013	18.7	20.9	3.8	7.5	1.3	3.6	1	1	1	2	2	2	0	Flagellar	FliJ	protein
TMF_DNA_bd	PF12329.3	gi|479324952|ref|YP_007865003.1|	-	0.0014	18.3	36.2	0.0029	17.3	6.6	3.7	2	1	2	4	4	3	3	TATA	element	modulatory	factor	1	DNA	binding
TPR_MLP1_2	PF07926.7	gi|479324952|ref|YP_007865003.1|	-	0.0015	18.2	24.0	0.0054	16.4	9.1	2.3	1	1	1	2	2	2	1	TPR/MLP1/MLP2-like	protein
Transposase_22	PF02994.9	gi|479324952|ref|YP_007865003.1|	-	0.0017	16.8	14.2	0.0029	16.1	9.8	1.3	1	0	0	1	1	1	1	L1	transposable	element
IFT57	PF10498.4	gi|479324952|ref|YP_007865003.1|	-	0.0018	17.0	16.2	0.003	16.3	11.3	1.3	1	0	0	1	1	1	1	Intra-flagellar	transport	protein	57
FliD_N	PF02465.13	gi|479324952|ref|YP_007865003.1|	-	0.0019	18.5	16.8	0.14	12.5	0.7	3.7	1	1	2	3	3	3	1	Flagellar	hook-associated	protein	2	N-terminus
PMEI	PF04043.10	gi|479324952|ref|YP_007865003.1|	-	0.0021	17.9	4.3	0.0051	16.7	2.3	1.8	1	1	0	1	1	1	1	Plant	invertase/pectin	methylesterase	inhibitor
FlgN	PF05130.7	gi|479324952|ref|YP_007865003.1|	-	0.0024	18.1	17.5	0.0024	18.1	12.1	1.8	1	1	1	2	2	2	1	FlgN	protein
Spc7	PF08317.6	gi|479324952|ref|YP_007865003.1|	-	0.0026	16.5	22.1	0.0086	14.7	15.1	1.9	1	1	0	1	1	1	1	Spc7	kinetochore	protein
Apc5	PF12862.2	gi|479324952|ref|YP_007865003.1|	-	0.0029	17.3	7.4	4.4	7.1	0.2	4.5	1	1	5	6	6	6	0	Anaphase-promoting	complex	subunit	5
Prefoldin	PF02996.12	gi|479324952|ref|YP_007865003.1|	-	0.003	17.2	21.0	0.31	10.7	2.7	4.1	1	1	4	5	5	5	2	Prefoldin	subunit
Baculo_PEP_C	PF04513.7	gi|479324952|ref|YP_007865003.1|	-	0.0031	17.3	16.5	0.53	10.0	11.3	2.5	1	1	0	1	1	1	1	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
APG17	PF04108.7	gi|479324952|ref|YP_007865003.1|	-	0.0031	16.3	15.5	0.017	13.9	4.7	2.1	1	1	1	2	2	2	1	Autophagy	protein	Apg17
Filament	PF00038.16	gi|479324952|ref|YP_007865003.1|	-	0.0054	16.2	18.8	0.079	12.4	12.4	2.3	1	1	1	2	2	2	2	Intermediate	filament	protein
Herpes_U30	PF04523.8	gi|479324952|ref|YP_007865003.1|	-	0.0054	14.2	6.2	0.007	13.8	4.3	1.1	1	0	0	1	1	1	1	Herpes	virus	tegument	protein	U30
DUF2570	PF10828.3	gi|479324952|ref|YP_007865003.1|	-	0.0067	16.0	22.6	0.16	11.5	5.2	2.4	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF2570)
Gp58	PF07902.6	gi|479324952|ref|YP_007865003.1|	-	0.0071	14.6	14.2	0.16	10.1	4.6	2.1	1	1	1	2	2	2	2	gp58-like	protein
V_ATPase_I	PF01496.14	gi|479324952|ref|YP_007865003.1|	-	0.0099	13.7	18.5	0.018	12.9	12.3	1.7	1	1	1	2	2	2	1	V-type	ATPase	116kDa	subunit	family
COG5	PF10392.4	gi|479324952|ref|YP_007865003.1|	-	0.011	15.7	14.4	0.025	14.5	7.8	2.5	1	1	1	2	2	2	0	Golgi	transport	complex	subunit	5
Laminin_II	PF06009.7	gi|479324952|ref|YP_007865003.1|	-	0.012	15.3	21.5	0.51	10.0	7.3	2.6	1	1	1	2	2	2	0	Laminin	Domain	II
DASH_Spc34	PF08657.5	gi|479324952|ref|YP_007865003.1|	-	0.012	15.3	16.3	0.023	14.3	6.2	2.5	1	1	1	2	2	2	0	DASH	complex	subunit	Spc34
Mnd1	PF03962.10	gi|479324952|ref|YP_007865003.1|	-	0.012	15.2	20.1	0.32	10.6	6.8	2.5	1	1	1	2	2	2	0	Mnd1	family
PhageMin_Tail	PF10145.4	gi|479324952|ref|YP_007865003.1|	-	0.014	15.0	10.7	0.099	12.2	7.4	2.0	1	1	0	1	1	1	0	Phage-related	minor	tail	protein
HOOK	PF05622.7	gi|479324952|ref|YP_007865003.1|	-	0.014	13.2	20.5	0.038	11.7	6.8	1.9	1	1	1	2	2	2	0	HOOK	protein
GAS	PF13851.1	gi|479324952|ref|YP_007865003.1|	-	0.016	14.3	22.8	0.013	14.6	7.8	2.3	1	1	1	2	2	2	0	Growth-arrest	specific	micro-tubule	binding
TMP_2	PF06791.8	gi|479324952|ref|YP_007865003.1|	-	0.017	14.7	14.3	0.31	10.6	3.6	2.2	1	1	1	2	2	2	0	Prophage	tail	length	tape	measure	protein
Filo_VP35	PF02097.10	gi|479324952|ref|YP_007865003.1|	-	0.018	14.2	14.8	0.94	8.6	2.9	3.2	1	1	1	2	2	2	0	Filoviridae	VP35
CENP-Q	PF13094.1	gi|479324952|ref|YP_007865003.1|	-	0.018	15.0	22.9	0.11	12.5	4.8	3.0	1	1	1	2	2	2	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
Spectrin	PF00435.16	gi|479324952|ref|YP_007865003.1|	-	0.018	15.2	20.0	0.83	9.9	6.7	2.8	1	1	2	3	3	3	0	Spectrin	repeat
Hemerythrin	PF01814.18	gi|479324952|ref|YP_007865003.1|	-	0.02	15.0	1.1	0.91	9.6	0.3	2.8	1	1	1	2	2	2	0	Hemerythrin	HHE	cation	binding	domain
Laminin_I	PF06008.9	gi|479324952|ref|YP_007865003.1|	-	0.021	14.1	23.9	0.17	11.1	3.4	2.2	1	1	2	3	3	3	0	Laminin	Domain	I
Vps53_N	PF04100.7	gi|479324952|ref|YP_007865003.1|	-	0.022	13.5	19.7	0.61	8.7	13.5	2.1	1	1	1	2	2	2	0	Vps53-like,	N-terminal
DUF1487	PF07368.6	gi|479324952|ref|YP_007865003.1|	-	0.024	13.8	4.3	0.018	14.2	1.1	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1487)
Acyl-CoA_dh_C	PF12806.2	gi|479324952|ref|YP_007865003.1|	-	0.024	14.4	12.4	9.5e+02	-0.4	8.6	3.8	1	1	0	1	1	0	0	Acetyl-CoA	dehydrogenase	C-terminal	like
TFR_dimer	PF04253.10	gi|479324952|ref|YP_007865003.1|	-	0.03	13.8	9.1	5.2	6.6	0.4	4.2	1	1	3	4	4	4	0	Transferrin	receptor-like	dimerisation	domain
LXG	PF04740.7	gi|479324952|ref|YP_007865003.1|	-	0.032	14.0	16.5	0.051	13.3	4.5	2.3	1	1	1	2	2	2	0	LXG	domain	of	WXG	superfamily
DUF2347	PF09804.4	gi|479324952|ref|YP_007865003.1|	-	0.032	13.4	4.1	0.069	12.4	2.9	1.6	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2347)
Flu_NS2	PF00601.14	gi|479324952|ref|YP_007865003.1|	-	0.036	14.2	4.5	1.7	8.9	0.8	3.0	1	1	2	3	3	3	0	Influenza	non-structural	protein	(NS2)
Rootletin	PF15035.1	gi|479324952|ref|YP_007865003.1|	-	0.036	14.0	14.9	0.13	12.2	10.3	1.8	1	1	0	1	1	1	0	Ciliary	rootlet	component,	centrosome	cohesion
H-kinase_dim	PF02895.9	gi|479324952|ref|YP_007865003.1|	-	0.039	14.3	15.8	9.1e+03	-3.0	11.0	4.0	1	1	0	1	1	0	0	Signal	transducing	histidine	kinase,	homodimeric	domain
Med9	PF07544.8	gi|479324952|ref|YP_007865003.1|	-	0.04	13.6	20.2	0.87	9.3	3.9	3.5	1	1	2	3	3	3	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
Myosin_tail_1	PF01576.14	gi|479324952|ref|YP_007865003.1|	-	0.043	11.5	21.8	0.32	8.6	8.9	1.7	1	1	1	2	2	2	0	Myosin	tail
DUF3818	PF12825.2	gi|479324952|ref|YP_007865003.1|	-	0.047	12.3	10.5	0.99	8.0	6.6	2.9	1	1	0	1	1	1	0	Domain	of	unknown	function	in	PX-proteins	(DUF3818)
ATG_C	PF09333.6	gi|479324952|ref|YP_007865003.1|	-	0.049	13.7	11.0	0.24	11.5	0.7	3.4	1	1	3	4	4	4	0	ATG	C	terminal	domain
MttA_Hcf106	PF02416.11	gi|479324952|ref|YP_007865003.1|	-	0.054	12.6	5.1	13	4.9	0.1	3.6	3	0	0	3	3	3	0	mttA/Hcf106	family
DUF4248	PF14053.1	gi|479324952|ref|YP_007865003.1|	-	0.059	12.9	3.7	4.6	6.8	0.1	4.5	2	1	2	5	5	4	0	Domain	of	unknown	function	(DUF4248)
CK2S	PF15011.1	gi|479324952|ref|YP_007865003.1|	-	0.065	13.0	14.8	0.73	9.5	1.2	2.5	1	1	1	2	2	2	0	Casein	Kinase	2	substrate
P4Ha_N	PF08336.6	gi|479324952|ref|YP_007865003.1|	-	0.066	13.0	16.2	0.24	11.2	1.5	3.8	1	1	3	4	4	4	0	Prolyl	4-Hydroxylase	alpha-subunit,	N-terminal	region
ING	PF12998.2	gi|479324952|ref|YP_007865003.1|	-	0.068	13.4	15.0	0.069	13.4	6.0	2.8	2	1	1	3	3	2	0	Inhibitor	of	growth	proteins	N-terminal	histone-binding
Pinin_SDK_N	PF04697.8	gi|479324952|ref|YP_007865003.1|	-	0.072	13.1	8.8	3.9	7.5	0.3	3.5	1	1	2	4	4	4	0	pinin/SDK	conserved	region
Cauli_AT	PF03233.8	gi|479324952|ref|YP_007865003.1|	-	0.076	12.7	18.5	0.14	11.8	2.6	3.4	1	1	2	3	3	3	0	Aphid	transmission	protein
Syntaxin	PF00804.20	gi|479324952|ref|YP_007865003.1|	-	0.077	13.1	20.3	0.39	10.8	7.3	2.8	1	1	1	2	2	2	0	Syntaxin
Macoilin	PF09726.4	gi|479324952|ref|YP_007865003.1|	-	0.079	11.2	16.7	0.1	10.8	11.6	1.1	1	0	0	1	1	1	0	Transmembrane	protein
Prominin	PF05478.6	gi|479324952|ref|YP_007865003.1|	-	0.096	10.2	17.9	3	5.2	12.4	2.2	1	1	0	1	1	1	0	Prominin
GlnE	PF03710.10	gi|479324952|ref|YP_007865003.1|	-	0.099	11.8	10.7	2	7.5	1.4	2.8	1	1	0	2	2	2	0	Glutamate-ammonia	ligase	adenylyltransferase
Dimerisation	PF08100.6	gi|479324952|ref|YP_007865003.1|	-	0.099	12.4	2.3	12	5.8	0.1	3.0	1	1	2	3	3	2	0	Dimerisation	domain
NEP	PF10167.4	gi|479324952|ref|YP_007865003.1|	-	0.1	12.3	9.4	0.32	10.6	4.6	2.5	1	1	2	3	3	3	0	Uncharacterised	conserved	protein
BicD	PF09730.4	gi|479324952|ref|YP_007865003.1|	-	0.11	10.8	21.0	0.18	10.1	14.6	1.3	1	1	0	1	1	1	0	Microtubule-associated	protein	Bicaudal-D
Serine_rich	PF08824.5	gi|479324952|ref|YP_007865003.1|	-	0.12	12.0	10.0	0.98	9.1	0.5	2.3	1	1	1	2	2	2	0	Serine	rich	protein	interaction	domain
DASH_Duo1	PF08651.5	gi|479324952|ref|YP_007865003.1|	-	0.14	11.7	14.2	5	6.7	0.5	4.1	1	1	3	4	4	4	0	DASH	complex	subunit	Duo1
DUF4559	PF15112.1	gi|479324952|ref|YP_007865003.1|	-	0.15	11.1	16.3	1.1	8.3	11.2	2.2	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4559)
FH2	PF02181.18	gi|479324952|ref|YP_007865003.1|	-	0.16	10.8	14.2	1.7	7.4	1.5	2.3	1	1	1	2	2	2	0	Formin	Homology	2	Domain
TPR_12	PF13424.1	gi|479324952|ref|YP_007865003.1|	-	0.16	11.9	3.7	31	4.6	0.5	4.5	2	1	3	5	5	4	0	Tetratricopeptide	repeat
AATF-Che1	PF13339.1	gi|479324952|ref|YP_007865003.1|	-	0.17	12.0	14.3	3.1	7.9	7.0	3.0	1	1	1	2	2	2	0	Apoptosis	antagonizing	transcription	factor
KSR1-SAM	PF13543.1	gi|479324952|ref|YP_007865003.1|	-	0.17	11.6	7.7	1.7	8.4	0.7	2.5	1	1	1	2	2	2	0	SAM	like	domain	present	in	kinase	suppressor	RAS	1
Bacillus_HBL	PF05791.6	gi|479324952|ref|YP_007865003.1|	-	0.17	11.2	20.3	1.2	8.4	3.4	2.5	1	1	1	2	2	2	0	Bacillus	haemolytic	enterotoxin	(HBL)
DUF3086	PF11285.3	gi|479324952|ref|YP_007865003.1|	-	0.18	10.6	5.6	0.26	10.0	3.9	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3086)
DUF4463	PF14703.1	gi|479324952|ref|YP_007865003.1|	-	0.18	12.3	8.8	25	5.4	0.4	4.7	1	1	2	3	3	2	0	Domain	of	unknown	function	(DUF4463)
ClpS	PF02617.12	gi|479324952|ref|YP_007865003.1|	-	0.2	11.3	5.2	16	5.2	0.2	3.3	1	1	2	3	3	3	0	ATP-dependent	Clp	protease	adaptor	protein	ClpS
DUF972	PF06156.8	gi|479324952|ref|YP_007865003.1|	-	0.22	11.9	18.6	0.62	10.4	5.5	3.0	1	1	3	4	4	4	0	Protein	of	unknown	function	(DUF972)
Tropomyosin_1	PF12718.2	gi|479324952|ref|YP_007865003.1|	-	0.22	11.3	24.1	0.46	10.3	7.9	2.3	1	1	1	2	2	2	0	Tropomyosin	like
DUF641	PF04859.7	gi|479324952|ref|YP_007865003.1|	-	0.23	11.1	18.5	3.9	7.2	2.5	3.4	1	1	2	3	3	2	0	Plant	protein	of	unknown	function	(DUF641)
RmuC	PF02646.11	gi|479324952|ref|YP_007865003.1|	-	0.24	10.1	19.8	2.2	7.0	3.8	2.9	1	1	2	3	3	3	0	RmuC	family
Syntaxin-6_N	PF09177.6	gi|479324952|ref|YP_007865003.1|	-	0.24	11.8	14.2	1.7	9.1	1.5	2.8	1	1	1	2	2	2	0	Syntaxin	6,	N-terminal
Mod_r	PF07200.8	gi|479324952|ref|YP_007865003.1|	-	0.26	11.1	22.5	0.57	10.0	6.2	2.5	2	1	1	3	3	2	0	Modifier	of	rudimentary	(Mod(r))	protein
ECM11	PF15463.1	gi|479324952|ref|YP_007865003.1|	-	0.26	11.5	9.9	0.84	9.9	1.1	2.5	1	1	1	2	2	2	0	Extracellular	mutant	protein	11
TMPIT	PF07851.8	gi|479324952|ref|YP_007865003.1|	-	0.28	10.2	17.2	0.17	10.9	6.8	2.2	1	1	2	3	3	3	0	TMPIT-like	protein
DUF2680	PF10925.3	gi|479324952|ref|YP_007865003.1|	-	0.28	11.0	0.1	0.28	11.0	0.1	3.9	2	2	1	3	3	1	0	Protein	of	unknown	function	(DUF2680)
HTH_Tnp_Mu_2	PF09039.6	gi|479324952|ref|YP_007865003.1|	-	0.28	10.9	3.6	54	3.5	0.1	3.4	1	1	3	4	4	4	0	Mu	DNA	binding,	I	gamma	subdomain
DUF4201	PF13870.1	gi|479324952|ref|YP_007865003.1|	-	0.28	10.5	19.4	9.3	5.6	13.4	3.2	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4201)
HsbA	PF12296.3	gi|479324952|ref|YP_007865003.1|	-	0.3	10.9	12.9	0.65	9.8	7.1	2.6	1	1	1	2	2	2	0	Hydrophobic	surface	binding	protein	A
MutS_III	PF05192.13	gi|479324952|ref|YP_007865003.1|	-	0.31	10.8	5.3	0.72	9.5	3.7	1.8	1	1	0	1	1	1	0	MutS	domain	III
DivIVA	PF05103.8	gi|479324952|ref|YP_007865003.1|	-	0.34	10.9	26.5	0.67	10.0	2.7	2.6	2	1	1	3	3	2	0	DivIVA	protein
CCDC155	PF14662.1	gi|479324952|ref|YP_007865003.1|	-	0.36	10.4	21.0	1.6	8.2	14.4	1.9	1	1	0	1	1	1	0	Coiled-coil	region	of	CCDC155
FUSC	PF04632.7	gi|479324952|ref|YP_007865003.1|	-	0.38	9.1	0.9	0.46	8.8	0.6	1.1	1	0	0	1	1	1	0	Fusaric	acid	resistance	protein	family
UPF0242	PF06785.6	gi|479324952|ref|YP_007865003.1|	-	0.38	9.3	13.6	0.57	8.7	9.4	1.2	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0242)
TMF_TATA_bd	PF12325.3	gi|479324952|ref|YP_007865003.1|	-	0.39	10.4	21.2	0.27	10.9	10.9	2.7	1	1	1	2	2	2	0	TATA	element	modulatory	factor	1	TATA	binding
FimP	PF09766.4	gi|479324952|ref|YP_007865003.1|	-	0.4	9.7	22.7	0.16	10.9	4.0	2.7	2	1	2	4	4	3	0	Fms-interacting	protein
RTBV_P46	PF06216.6	gi|479324952|ref|YP_007865003.1|	-	0.4	9.4	9.0	3.1	6.5	0.9	2.5	1	1	1	2	2	2	0	Rice	tungro	bacilliform	virus	P46	protein
BTAD	PF03704.12	gi|479324952|ref|YP_007865003.1|	-	0.43	10.8	3.2	1.8	8.8	2.1	2.0	1	1	0	1	1	1	0	Bacterial	transcriptional	activator	domain
zf-C4H2	PF10146.4	gi|479324952|ref|YP_007865003.1|	-	0.43	10.5	15.3	1.5	8.7	10.5	1.9	1	1	0	1	1	1	0	Zinc	finger-containing	protein
DUF2201_N	PF13203.1	gi|479324952|ref|YP_007865003.1|	-	0.45	9.6	9.8	1.7	7.7	6.8	1.8	1	1	0	1	1	1	0	Putative	metallopeptidase	domain
DUF445	PF04286.7	gi|479324952|ref|YP_007865003.1|	-	0.45	9.9	15.9	0.058	12.9	8.3	1.5	2	0	0	2	2	1	0	Protein	of	unknown	function	(DUF445)
PXA	PF02194.10	gi|479324952|ref|YP_007865003.1|	-	0.45	10.0	10.6	1.2	8.6	2.6	2.1	1	1	1	2	2	2	0	PXA	domain
DUF1804	PF08822.6	gi|479324952|ref|YP_007865003.1|	-	0.47	10.1	7.5	0.49	10.1	2.2	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1804)
DUF812	PF05667.6	gi|479324952|ref|YP_007865003.1|	-	0.51	8.7	23.2	1.8	6.9	15.7	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF812)
DUF1319	PF07028.6	gi|479324952|ref|YP_007865003.1|	-	0.52	10.5	19.2	0.65	10.2	1.4	3.6	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF1319)
APG6	PF04111.7	gi|479324952|ref|YP_007865003.1|	-	0.52	9.3	19.9	0.061	12.3	8.3	2.0	1	1	1	2	2	2	0	Autophagy	protein	Apg6
Sec8_exocyst	PF04048.9	gi|479324952|ref|YP_007865003.1|	-	0.52	9.9	14.7	0.7	9.5	5.4	2.3	1	1	1	2	2	2	0	Sec8	exocyst	complex	component	specific	domain
COG2	PF06148.6	gi|479324952|ref|YP_007865003.1|	-	0.53	10.1	19.5	1.6	8.6	2.3	3.5	1	1	2	3	3	3	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
Orbi_VP5	PF00901.12	gi|479324952|ref|YP_007865003.1|	-	0.53	8.4	22.5	0.15	10.2	7.6	2.1	1	1	1	2	2	2	0	Orbivirus	outer	capsid	protein	VP5
SATase_N	PF06426.9	gi|479324952|ref|YP_007865003.1|	-	0.55	10.5	4.5	2	8.7	0.1	2.6	1	1	1	2	2	2	0	Serine	acetyltransferase,	N-terminal
Phage_GP20	PF06810.6	gi|479324952|ref|YP_007865003.1|	-	0.57	9.6	28.8	0.08	12.3	2.8	3.4	2	1	3	5	5	4	0	Phage	minor	structural	protein	GP20
UME	PF08064.8	gi|479324952|ref|YP_007865003.1|	-	0.59	10.1	7.7	12	5.9	0.4	3.3	1	1	2	3	3	3	0	UME	(NUC010)	domain
ERM	PF00769.14	gi|479324952|ref|YP_007865003.1|	-	0.65	9.4	21.0	0.3	10.5	7.8	2.1	1	1	1	2	2	2	0	Ezrin/radixin/moesin	family
EMP24_GP25L	PF01105.19	gi|479324952|ref|YP_007865003.1|	-	0.67	9.6	12.9	4.9e+02	0.3	9.0	3.0	1	1	0	1	1	1	0	emp24/gp25L/p24	family/GOLD
BRE1	PF08647.6	gi|479324952|ref|YP_007865003.1|	-	0.69	9.9	21.7	1.2	9.2	8.7	3.3	1	1	2	3	3	3	0	BRE1	E3	ubiquitin	ligase
DUF3571	PF12095.3	gi|479324952|ref|YP_007865003.1|	-	0.72	10.1	8.5	13	6.1	0.2	3.3	1	1	3	4	4	4	0	Protein	of	unknown	function	(DUF3571)
Troponin	PF00992.15	gi|479324952|ref|YP_007865003.1|	-	0.81	9.7	25.2	0.14	12.2	6.0	2.8	2	1	1	3	3	2	0	Troponin
Tweety	PF04906.8	gi|479324952|ref|YP_007865003.1|	-	0.82	8.0	13.3	0.4	9.0	2.2	2.0	1	1	2	3	3	3	0	Tweety
DUF4298	PF14131.1	gi|479324952|ref|YP_007865003.1|	-	0.82	9.5	11.8	25	4.8	0.3	4.5	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF4298)
Jacalin	PF01419.12	gi|479324952|ref|YP_007865003.1|	-	0.88	9.4	14.1	3.4	7.5	0.9	3.9	2	1	1	3	3	3	0	Jacalin-like	lectin	domain
CorA	PF01544.13	gi|479324952|ref|YP_007865003.1|	-	0.9	8.5	10.6	0.24	10.3	3.9	2.3	2	1	1	3	3	2	0	CorA-like	Mg2+	transporter	protein
DUF2379	PF09543.5	gi|479324952|ref|YP_007865003.1|	-	0.91	9.4	8.1	2	8.3	4.3	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2379)
YlbD_coat	PF14071.1	gi|479324952|ref|YP_007865003.1|	-	1.1	9.3	15.2	2.9e+03	-1.8	10.6	3.4	1	1	0	1	1	0	0	Putative	coat	protein
VSG_B	PF13206.1	gi|479324952|ref|YP_007865003.1|	-	1.2	8.2	11.4	1.8	7.6	7.9	1.3	1	0	0	1	1	1	0	Trypanosomal	VSG	domain
IKKbetaNEMObind	PF12179.3	gi|479324952|ref|YP_007865003.1|	-	1.2	9.0	5.6	52	3.7	0.0	4.1	4	2	0	4	4	3	0	I-kappa-kinase-beta	NEMO	binding	domain
HAP1_N	PF04849.8	gi|479324952|ref|YP_007865003.1|	-	1.3	7.9	21.5	2.2	7.1	8.5	2.2	1	1	1	2	2	2	0	HAP1	N-terminal	conserved	region
DUF651	PF04895.7	gi|479324952|ref|YP_007865003.1|	-	1.4	8.6	8.4	7.3	6.2	0.8	3.3	1	1	2	3	3	3	0	Archaeal	protein	of	unknown	function	(DUF651)
DUF904	PF06005.7	gi|479324952|ref|YP_007865003.1|	-	1.4	9.2	25.5	5.4	7.3	5.6	4.1	1	1	2	3	3	2	0	Protein	of	unknown	function	(DUF904)
MT0933_antitox	PF14013.1	gi|479324952|ref|YP_007865003.1|	-	1.5	8.9	13.6	54	3.9	0.0	5.8	3	1	3	6	6	4	0	MT0933-like	antitoxin	protein
DUF241	PF03087.9	gi|479324952|ref|YP_007865003.1|	-	1.5	8.2	14.6	3.4	7.0	10.1	1.6	1	1	0	1	1	1	0	Arabidopsis	protein	of	unknown	function
HrpB7	PF09486.5	gi|479324952|ref|YP_007865003.1|	-	1.7	8.5	11.6	5.5	6.9	8.1	1.9	1	1	0	1	1	1	0	Bacterial	type	III	secretion	protein	(HrpB7)
NAAA-beta	PF15508.1	gi|479324952|ref|YP_007865003.1|	-	1.8	8.9	5.6	17	5.8	0.6	3.6	2	1	2	4	4	3	0	beta	subunit	of	N-acylethanolamine-hydrolyzing	acid	amidase
ALMT	PF11744.3	gi|479324952|ref|YP_007865003.1|	-	1.9	7.0	14.5	4.5	5.8	9.5	1.8	1	1	0	1	1	1	0	Aluminium	activated	malate	transporter
Seryl_tRNA_N	PF02403.17	gi|479324952|ref|YP_007865003.1|	-	1.9	8.5	27.6	1.6	8.7	9.1	3.1	2	1	2	4	4	3	0	Seryl-tRNA	synthetase	N-terminal	domain
Fzo_mitofusin	PF04799.8	gi|479324952|ref|YP_007865003.1|	-	2	7.7	16.0	0.67	9.3	1.0	3.1	1	1	2	3	3	3	0	fzo-like	conserved	region
Glutaredoxin2_C	PF04399.8	gi|479324952|ref|YP_007865003.1|	-	2.5	7.7	12.9	3.5	7.2	1.2	3.5	1	1	3	4	4	4	0	Glutaredoxin	2,	C	terminal	domain
Cytochrom_C552	PF02335.10	gi|479324952|ref|YP_007865003.1|	-	2.5	6.7	14.3	4.4	5.8	9.9	1.4	1	1	0	1	1	1	0	Cytochrome	c552
Cytochrom_C_2	PF01322.15	gi|479324952|ref|YP_007865003.1|	-	2.6	8.6	10.0	88	3.6	7.0	2.4	1	1	0	1	1	1	0	Cytochrome	C'
DUF2422	PF10337.4	gi|479324952|ref|YP_007865003.1|	-	2.7	6.7	8.5	0.83	8.3	0.3	2.0	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2422)
GLE1	PF07817.8	gi|479324952|ref|YP_007865003.1|	-	2.8	6.8	16.7	1.4	7.7	2.7	2.3	1	1	1	2	2	2	0	GLE1-like	protein
YjcZ	PF13990.1	gi|479324952|ref|YP_007865003.1|	-	2.8	6.9	13.6	7.8	5.5	3.8	2.1	1	1	1	2	2	2	0	YjcZ-like	protein
SPX	PF03105.14	gi|479324952|ref|YP_007865003.1|	-	2.9	7.6	8.5	4.7	6.9	5.9	1.3	1	0	0	1	1	1	0	SPX	domain
AbiH	PF14253.1	gi|479324952|ref|YP_007865003.1|	-	2.9	7.4	12.3	54	3.2	8.5	2.5	1	1	0	1	1	1	0	Bacteriophage	abortive	infection	AbiH
DUF3450	PF11932.3	gi|479324952|ref|YP_007865003.1|	-	3.2	6.9	21.2	62	2.7	14.5	2.1	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3450)
Sas10_Utp3	PF04000.10	gi|479324952|ref|YP_007865003.1|	-	3.2	8.0	14.4	1.5e+04	-5.4	10.0	4.3	1	1	0	1	1	0	0	Sas10/Utp3/C1D	family
DUF2076	PF09849.4	gi|479324952|ref|YP_007865003.1|	-	3.4	7.6	14.9	58	3.6	10.4	2.2	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2076)
Peptidase_C6	PF00851.13	gi|479324952|ref|YP_007865003.1|	-	3.6	6.1	12.1	6.7	5.2	8.4	1.5	1	1	0	1	1	1	0	Helper	component	proteinase
DUF2400	PF09674.5	gi|479324952|ref|YP_007865003.1|	-	3.8	7.1	9.6	64	3.1	6.0	2.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2400)
Cluap1	PF10234.4	gi|479324952|ref|YP_007865003.1|	-	4	6.5	22.0	95	2.0	15.2	2.4	1	1	0	1	1	1	0	Clusterin-associated	protein-1
DUF2968	PF11180.3	gi|479324952|ref|YP_007865003.1|	-	4.3	6.6	22.8	1	8.7	5.4	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2968)
WHEP-TRS	PF00458.15	gi|479324952|ref|YP_007865003.1|	-	4.4	7.0	22.6	5	6.8	0.5	5.2	5	0	0	5	5	4	0	WHEP-TRS	domain
HrpJ	PF07201.6	gi|479324952|ref|YP_007865003.1|	-	4.5	7.2	15.4	5.5	6.9	7.9	2.2	1	1	1	2	2	2	0	HrpJ-like	domain
Hormone_1	PF00103.15	gi|479324952|ref|YP_007865003.1|	-	4.7	6.5	8.5	14	4.9	5.6	1.9	1	1	0	1	1	1	0	Somatotropin	hormone	family
DUF2664	PF10867.3	gi|479324952|ref|YP_007865003.1|	-	4.9	7.8	15.7	4.9	7.8	2.1	3.2	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF2664)
COG6	PF06419.6	gi|479324952|ref|YP_007865003.1|	-	5	5.1	18.5	2.6	6.0	4.9	2.4	1	1	1	2	2	2	0	Conserved	oligomeric	complex	COG6
Striatin	PF08232.7	gi|479324952|ref|YP_007865003.1|	-	5	7.4	18.5	5.3e+02	0.8	12.7	2.7	1	1	0	1	1	1	0	Striatin	family
DUF4200	PF13863.1	gi|479324952|ref|YP_007865003.1|	-	5.2	7.0	22.5	14	5.6	2.2	2.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4200)
OEP	PF02321.13	gi|479324952|ref|YP_007865003.1|	-	5.9	6.4	14.8	3.5	7.1	8.6	1.7	1	1	0	1	1	1	0	Outer	membrane	efflux	protein
HAUS6_N	PF14661.1	gi|479324952|ref|YP_007865003.1|	-	6.7	5.9	12.1	11	5.2	8.4	1.4	1	0	0	1	1	1	0	HAUS	augmin-like	complex	subunit	6	N-terminus
MMPL	PF03176.10	gi|479324952|ref|YP_007865003.1|	-	6.8	5.2	8.3	13	4.3	5.7	1.5	1	1	0	1	1	1	0	MMPL	family
FlaC_arch	PF05377.6	gi|479324952|ref|YP_007865003.1|	-	6.8	6.6	16.9	21	5.1	1.6	4.3	1	1	3	4	4	4	0	Flagella	accessory	protein	C	(FlaC)
Sec20	PF03908.8	gi|479324952|ref|YP_007865003.1|	-	7.3	6.3	13.4	18	5.1	4.5	3.2	1	1	2	3	3	3	0	Sec20
WXG100	PF06013.7	gi|479324952|ref|YP_007865003.1|	-	7.4	6.6	13.0	39	4.3	2.0	3.3	1	1	1	2	2	2	0	Proteins	of	100	residues	with	WXG
TMCO5	PF14992.1	gi|479324952|ref|YP_007865003.1|	-	7.5	5.5	20.5	15	4.5	14.1	1.6	1	1	0	1	1	1	0	TMCO5	family
DUF4094	PF13334.1	gi|479324952|ref|YP_007865003.1|	-	9	6.7	18.0	25	5.3	2.4	3.9	1	1	3	4	4	3	0	Domain	of	unknown	function	(DUF4094)
Ded_cyto	PF06920.8	gi|479324952|ref|YP_007865003.1|	-	9	5.5	12.8	92	2.2	8.9	2.9	1	1	0	1	1	1	0	Dedicator	of	cytokinesis
Metallophos_2	PF12850.2	gi|479324953|ref|YP_007865004.1|	-	1.1e-06	28.5	0.1	1.4e-05	24.9	0.0	2.0	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
OrfB_Zn_ribbon	PF07282.6	gi|479327028|ref|YP_007865005.1|	-	2.8e-20	71.7	0.2	2.8e-20	71.7	0.2	2.3	3	0	0	3	3	3	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|479327028|ref|YP_007865005.1|	-	1.2e-08	34.6	0.1	2.1e-08	33.8	0.1	1.4	1	0	0	1	1	1	1	Probable	transposase
zf-RING_4	PF14570.1	gi|479327028|ref|YP_007865005.1|	-	0.1	12.2	3.3	0.075	12.6	1.1	1.6	2	0	0	2	2	2	0	RING/Ubox	like	zinc-binding	domain
MIP	PF00230.15	gi|479324954|ref|YP_007865006.1|	-	9.1e-13	48.1	0.4	1.2e-12	47.8	0.2	1.0	1	0	0	1	1	1	1	Major	intrinsic	protein
MFS_2	PF13347.1	gi|479324954|ref|YP_007865006.1|	-	0.051	11.9	0.1	0.057	11.7	0.1	1.0	1	0	0	1	1	1	0	MFS/sugar	transport	protein
FGGY_N	PF00370.16	gi|479324955|ref|YP_007865007.1|	-	1.8e-78	263.2	0.0	2.9e-78	262.5	0.0	1.3	1	0	0	1	1	1	1	FGGY	family	of	carbohydrate	kinases,	N-terminal	domain
FGGY_C	PF02782.11	gi|479324955|ref|YP_007865007.1|	-	5.2e-62	208.9	0.0	8.1e-62	208.3	0.0	1.3	1	0	0	1	1	1	1	FGGY	family	of	carbohydrate	kinases,	C-terminal	domain
COXG	PF06240.8	gi|479324956|ref|YP_007865008.1|	-	0.057	13.0	0.0	0.061	12.9	0.0	1.0	1	0	0	1	1	1	0	Carbon	monoxide	dehydrogenase	subunit	G	(CoxG)
HTH_24	PF13412.1	gi|479324957|ref|YP_007865009.1|	-	5.3e-21	73.7	9.4	6.7e-17	60.6	0.7	2.3	2	0	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|479324957|ref|YP_007865009.1|	-	4.5e-15	54.9	4.7	7.8e-12	44.5	0.1	2.5	3	0	0	3	3	3	2	AsnC-type	helix-turn-helix	domain
TrmB	PF01978.14	gi|479324957|ref|YP_007865009.1|	-	1.6e-06	27.7	0.4	0.0014	18.2	0.0	2.3	2	0	0	2	2	2	2	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.17	gi|479324957|ref|YP_007865009.1|	-	1.2e-05	24.9	0.4	0.00023	20.8	0.0	2.3	2	0	0	2	2	2	1	MarR	family
MarR_2	PF12802.2	gi|479324957|ref|YP_007865009.1|	-	6.7e-05	22.4	0.0	0.00033	20.2	0.0	1.9	2	0	0	2	2	2	1	MarR	family
TFIIE_alpha	PF02002.12	gi|479324957|ref|YP_007865009.1|	-	0.00011	21.6	1.3	0.34	10.4	0.3	2.5	2	0	0	2	2	2	2	TFIIE	alpha	subunit
HTH_34	PF13601.1	gi|479324957|ref|YP_007865009.1|	-	0.00014	21.8	0.1	0.05	13.6	0.0	2.3	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_5	PF01022.15	gi|479324957|ref|YP_007865009.1|	-	0.00024	20.7	0.5	0.031	13.9	0.0	2.3	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_27	PF13463.1	gi|479324957|ref|YP_007865009.1|	-	0.0021	18.3	0.2	0.13	12.6	0.0	2.3	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_11	PF08279.7	gi|479324957|ref|YP_007865009.1|	-	0.011	15.3	0.7	0.025	14.1	0.1	1.8	2	0	0	2	2	2	0	HTH	domain
HTH_28	PF13518.1	gi|479324957|ref|YP_007865009.1|	-	0.017	15.1	0.0	0.037	14.0	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_9	PF08221.6	gi|479324957|ref|YP_007865009.1|	-	0.026	14.3	0.1	7.4	6.5	0.0	2.5	2	0	0	2	2	2	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
Rrf2	PF02082.15	gi|479324957|ref|YP_007865009.1|	-	0.042	13.9	0.8	4	7.6	0.0	2.3	2	0	0	2	2	2	0	Transcriptional	regulator
HTH_Mga	PF08280.6	gi|479324957|ref|YP_007865009.1|	-	0.08	12.7	1.1	0.42	10.3	0.0	2.4	2	0	0	2	2	2	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_DeoR	PF08220.7	gi|479324957|ref|YP_007865009.1|	-	0.085	12.4	0.3	0.85	9.2	0.0	2.2	2	0	0	2	2	2	0	DeoR-like	helix-turn-helix	domain
HTH_psq	PF05225.11	gi|479324957|ref|YP_007865009.1|	-	0.1	12.1	0.0	0.18	11.3	0.0	1.3	1	0	0	1	1	1	0	helix-turn-helix,	Psq	domain
MMPL	PF03176.10	gi|479324958|ref|YP_007865010.1|	-	4.2e-48	163.7	17.5	3.8e-26	91.6	0.2	2.1	2	0	0	2	2	2	2	MMPL	family
Acyl-CoA_dh_1	PF00441.19	gi|479324959|ref|YP_007865011.1|	-	1e-31	110.0	0.1	1.8e-31	109.2	0.1	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|479324959|ref|YP_007865011.1|	-	1.9e-09	36.9	0.0	3.5e-09	36.0	0.0	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.6	gi|479324959|ref|YP_007865011.1|	-	1e-06	28.9	0.0	2e-06	28.1	0.0	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
AMP-binding	PF00501.23	gi|479324960|ref|YP_007865012.1|	-	1.1e-67	228.3	0.0	1.2e-67	228.1	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|479324960|ref|YP_007865012.1|	-	1e-11	45.5	0.0	1.9e-11	44.7	0.0	1.4	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
AMP-binding_C_2	PF14535.1	gi|479324961|ref|YP_007865013.1|	-	7.6e-16	57.9	0.0	1.3e-15	57.2	0.0	1.4	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
AMP-binding	PF00501.23	gi|479324961|ref|YP_007865013.1|	-	2.4e-06	26.1	0.0	3.9e-06	25.5	0.0	1.2	1	0	0	1	1	1	1	AMP-binding	enzyme
CbiZ	PF01955.13	gi|479324962|ref|YP_007865014.1|	-	8e-35	120.3	0.0	9.7e-35	120.0	0.0	1.0	1	0	0	1	1	1	1	Adenosylcobinamide	amidohydrolase
MFS_1	PF07690.11	gi|479324963|ref|YP_007865015.1|	-	2.2e-21	75.9	67.9	3.2e-20	72.1	25.6	1.8	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|479324963|ref|YP_007865015.1|	-	2.9e-12	45.8	31.8	2.2e-11	43.0	22.1	2.2	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
DUF2324	PF10086.4	gi|479324964|ref|YP_007865016.1|	-	0.16	11.1	14.3	0.73	8.9	9.9	1.8	1	1	0	1	1	1	0	Putative	membrane	peptidase	family	(DUF2324)
DUF1648	PF07853.6	gi|479324965|ref|YP_007865017.1|	-	0.032	13.7	0.3	0.032	13.7	0.2	4.2	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF1648)
DUF1212	PF06738.7	gi|479324965|ref|YP_007865017.1|	-	3.5	7.0	10.2	7	6.0	5.2	2.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1212)
GntR	PF00392.16	gi|479324966|ref|YP_007865018.1|	-	8.5e-14	50.7	0.0	1.3e-13	50.1	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HTH_Crp_2	PF13545.1	gi|479324966|ref|YP_007865018.1|	-	0.00011	21.9	0.0	0.00018	21.2	0.0	1.4	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_41	PF14502.1	gi|479324966|ref|YP_007865018.1|	-	0.0024	17.4	0.0	0.0097	15.5	0.0	1.8	2	0	0	2	2	2	1	Helix-turn-helix	domain
LexA_DNA_bind	PF01726.11	gi|479324966|ref|YP_007865018.1|	-	0.017	14.6	0.0	0.039	13.5	0.0	1.6	1	1	1	2	2	2	0	LexA	DNA	binding	domain
RPA_C	PF08784.6	gi|479324966|ref|YP_007865018.1|	-	0.13	12.7	0.0	0.2	12.0	0.0	1.3	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
Mem_trans	PF03547.13	gi|479324967|ref|YP_007865019.1|	-	0.0002	19.7	23.9	0.013	13.7	1.3	3.0	2	1	1	3	3	3	3	Membrane	transport	protein
DUF973	PF06157.6	gi|479324971|ref|YP_007865023.1|	-	2.3e-90	302.4	50.4	2.6e-90	302.2	34.9	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
Fer4_7	PF12838.2	gi|479324972|ref|YP_007865024.1|	-	0.032	14.6	1.4	0.032	14.6	1.0	2.5	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|479324972|ref|YP_007865024.1|	-	0.097	12.6	14.6	0.068	13.1	2.3	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|479324972|ref|YP_007865024.1|	-	0.12	12.6	14.1	0.39	11.0	9.2	2.2	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|479324972|ref|YP_007865024.1|	-	0.14	12.6	12.4	0.1	13.0	1.4	2.6	3	0	0	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|479324972|ref|YP_007865024.1|	-	0.61	10.4	7.7	2	8.8	0.3	2.5	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|479324972|ref|YP_007865024.1|	-	0.75	9.6	14.2	0.15	11.9	2.1	1.9	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|479324972|ref|YP_007865024.1|	-	1.1	8.9	9.3	0.11	12.1	2.7	2.1	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|479324972|ref|YP_007865024.1|	-	1.9	8.5	11.2	0.92	9.5	1.4	2.2	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Molybdopterin	PF00384.17	gi|479324973|ref|YP_007865025.1|	-	2.2e-34	118.9	0.0	5e-34	117.7	0.0	1.6	1	1	0	1	1	1	1	Molybdopterin	oxidoreductase
Molybdop_Fe4S4	PF04879.11	gi|479324973|ref|YP_007865025.1|	-	8.3e-13	47.9	0.1	1.5e-12	47.0	0.0	1.5	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase	Fe4S4	domain
Molydop_binding	PF01568.16	gi|479324973|ref|YP_007865025.1|	-	2.9e-08	33.5	0.0	7e-08	32.2	0.0	1.6	1	0	0	1	1	1	1	Molydopterin	dinucleotide	binding	domain
TAT_signal	PF10518.4	gi|479324973|ref|YP_007865025.1|	-	8e-05	22.3	1.1	0.00018	21.2	0.7	1.6	1	0	0	1	1	1	1	TAT	(twin-arginine	translocation)	pathway	signal	sequence
RNR_N	PF08343.5	gi|479324973|ref|YP_007865025.1|	-	0.031	14.0	1.2	0.13	12.0	0.8	2.1	1	0	0	1	1	1	0	Ribonucleotide	reductase	N-terminal
Fer4_11	PF13247.1	gi|479324974|ref|YP_007865026.1|	-	9e-17	60.7	20.2	6.5e-16	58.0	9.2	3.1	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|479324974|ref|YP_007865026.1|	-	2.4e-16	59.8	23.6	6.3e-09	36.0	4.6	2.8	2	2	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|479324974|ref|YP_007865026.1|	-	3.1e-12	46.0	43.2	3.4e-07	29.9	3.1	3.2	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|479324974|ref|YP_007865026.1|	-	5.5e-12	45.7	23.3	1.1e-07	31.9	4.3	2.9	2	1	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|479324974|ref|YP_007865026.1|	-	4.1e-11	41.9	36.1	5.2e-08	32.1	2.5	6.0	5	1	0	5	5	5	3	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|479324974|ref|YP_007865026.1|	-	3.1e-09	36.2	35.5	1.7e-05	24.4	1.9	4.9	4	1	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|479324974|ref|YP_007865026.1|	-	1.6e-08	34.4	18.2	0.00026	20.9	3.8	2.7	2	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|479324974|ref|YP_007865026.1|	-	4.1e-08	32.7	38.4	0.00013	21.7	2.1	5.1	5	0	0	5	5	5	3	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|479324974|ref|YP_007865026.1|	-	1.9e-06	27.9	44.4	0.029	14.9	3.9	4.4	4	0	0	4	4	4	4	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|479324974|ref|YP_007865026.1|	-	1.2e-05	25.5	23.0	0.0013	19.0	3.6	3.3	2	2	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|479324974|ref|YP_007865026.1|	-	2.2e-05	24.2	27.1	7.5e-05	22.5	5.2	3.5	3	1	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|479324974|ref|YP_007865026.1|	-	0.0008	19.5	37.8	0.0095	16.2	1.6	4.8	4	1	0	4	4	4	2	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|479324974|ref|YP_007865026.1|	-	0.0017	18.8	0.3	0.0017	18.8	0.2	3.9	4	1	0	4	4	4	2	4Fe-4S	single	cluster	domain
Fer4_16	PF13484.1	gi|479324974|ref|YP_007865026.1|	-	0.01	16.5	26.4	0.14	12.8	4.4	3.8	3	1	1	4	4	4	0	4Fe-4S	double	cluster	binding	domain
Fer4_13	PF13370.1	gi|479324974|ref|YP_007865026.1|	-	0.18	12.2	0.3	0.18	12.2	0.2	4.4	5	0	0	5	5	4	0	4Fe-4S	single	cluster	domain
NrfD	PF03916.9	gi|479324975|ref|YP_007865027.1|	-	1.4e-67	228.3	16.2	1.4e-67	228.3	11.2	1.6	2	0	0	2	2	2	1	Polysulphide	reductase,	NrfD
DUF2839	PF10999.3	gi|479324975|ref|YP_007865027.1|	-	0.21	11.6	12.3	0.71	9.9	0.0	4.0	3	1	1	4	4	4	0	Protein	of	unknown	function	(DUF2839)
Fer4_7	PF12838.2	gi|479324976|ref|YP_007865028.1|	-	3.8e-18	65.5	33.5	1.7e-10	41.1	8.0	3.6	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|479324976|ref|YP_007865028.1|	-	3.1e-17	61.3	39.6	2.1e-06	27.0	1.9	5.1	5	0	0	5	5	5	4	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|479324976|ref|YP_007865028.1|	-	2.2e-15	55.7	34.3	0.00014	21.5	5.1	4.9	4	0	0	4	4	4	4	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|479324976|ref|YP_007865028.1|	-	2.8e-15	56.3	31.7	1.3e-07	31.7	5.5	4.0	3	2	0	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|479324976|ref|YP_007865028.1|	-	3.3e-14	52.4	43.7	1.1e-09	37.8	7.2	3.8	3	1	1	4	4	3	3	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|479324976|ref|YP_007865028.1|	-	1.3e-13	51.4	25.4	0.0024	18.5	1.7	4.7	4	0	0	4	4	4	4	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.1	gi|479324976|ref|YP_007865028.1|	-	3.2e-13	49.3	35.3	5.3e-08	32.5	7.7	3.6	4	0	0	4	4	4	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|479324976|ref|YP_007865028.1|	-	6.5e-13	47.7	37.8	2.4e-06	27.1	2.1	4.9	5	0	0	5	5	4	4	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|479324976|ref|YP_007865028.1|	-	1.7e-08	34.7	25.5	0.0026	18.1	0.2	4.8	3	1	1	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|479324976|ref|YP_007865028.1|	-	1e-07	31.8	31.0	0.001	19.0	7.8	4.3	1	1	2	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|479324976|ref|YP_007865028.1|	-	2.4e-07	31.2	22.3	0.0016	18.9	1.1	4.5	3	1	1	4	4	4	3	4Fe-4S	single	cluster	domain
Fer4_4	PF12800.2	gi|479324976|ref|YP_007865028.1|	-	2e-05	24.5	50.0	0.002	18.3	1.2	5.7	6	0	0	6	6	5	4	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|479324976|ref|YP_007865028.1|	-	6.7e-05	23.1	33.3	0.063	13.6	0.2	5.0	4	2	3	7	7	6	4	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|479324976|ref|YP_007865028.1|	-	0.00011	22.5	26.4	0.0043	17.3	0.2	5.0	5	0	0	5	5	4	3	4Fe-4S	single	cluster	domain
Fer4_11	PF13247.1	gi|479324976|ref|YP_007865028.1|	-	0.00025	20.8	19.2	0.015	15.1	2.7	3.0	2	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|479324976|ref|YP_007865028.1|	-	0.062	13.8	53.2	0.15	12.6	2.3	5.7	6	0	0	6	6	5	0	4Fe-4S	binding	domain
Nitrate_red_del	PF02613.10	gi|479324977|ref|YP_007865029.1|	-	3.7e-21	75.3	0.0	4.9e-21	74.9	0.0	1.1	1	0	0	1	1	1	1	Nitrate	reductase	delta	subunit
TetR_C_8	PF14278.1	gi|479324977|ref|YP_007865029.1|	-	0.05	13.9	2.0	0.11	12.8	0.1	2.2	2	0	0	2	2	2	0	Transcriptional	regulator	C-terminal	region
His_kinase	PF06580.8	gi|479324977|ref|YP_007865029.1|	-	0.11	12.4	0.4	2.2	8.2	0.0	2.4	2	0	0	2	2	2	0	Histidine	kinase
Kelch_4	PF13418.1	gi|479324978|ref|YP_007865030.1|	-	0.27	11.0	1.3	4	7.2	0.0	2.3	2	0	0	2	2	2	0	Galactose	oxidase,	central	domain
Peptidase_S9	PF00326.16	gi|479324979|ref|YP_007865031.1|	-	2.6e-43	147.7	0.0	4.2e-43	147.0	0.0	1.3	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
Abhydrolase_6	PF12697.2	gi|479324979|ref|YP_007865031.1|	-	1.8e-12	47.6	0.0	2.5e-11	43.9	0.0	2.1	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_5	PF12695.2	gi|479324979|ref|YP_007865031.1|	-	1.1e-11	44.6	0.0	1.7e-11	44.0	0.0	1.3	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
DLH	PF01738.13	gi|479324979|ref|YP_007865031.1|	-	2.3e-10	40.1	0.0	1.1e-09	37.8	0.0	2.0	1	1	0	1	1	1	1	Dienelactone	hydrolase	family
BAAT_C	PF08840.6	gi|479324979|ref|YP_007865031.1|	-	1.7e-07	31.1	0.0	2e-05	24.4	0.0	2.3	1	1	0	1	1	1	1	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
Peptidase_S15	PF02129.13	gi|479324979|ref|YP_007865031.1|	-	4.1e-05	23.1	0.0	0.012	15.0	0.0	2.5	1	1	1	2	2	2	2	X-Pro	dipeptidyl-peptidase	(S15	family)
Abhydrolase_1	PF00561.15	gi|479324979|ref|YP_007865031.1|	-	0.00042	19.9	0.1	0.025	14.1	0.1	2.5	1	1	1	2	2	2	1	alpha/beta	hydrolase	fold
Abhydrolase_3	PF07859.8	gi|479324979|ref|YP_007865031.1|	-	0.00057	19.5	0.0	0.0032	17.0	0.0	2.1	1	1	0	1	1	1	1	alpha/beta	hydrolase	fold
Esterase	PF00756.15	gi|479324979|ref|YP_007865031.1|	-	0.0013	18.1	0.0	0.0023	17.3	0.0	1.3	1	0	0	1	1	1	1	Putative	esterase
DUF2048	PF09752.4	gi|479324979|ref|YP_007865031.1|	-	0.002	17.0	0.0	0.0038	16.1	0.0	1.4	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2048)
Abhydrolase_4	PF08386.5	gi|479324979|ref|YP_007865031.1|	-	0.0038	17.0	0.0	0.0075	16.1	0.0	1.4	1	0	0	1	1	1	1	TAP-like	protein
AXE1	PF05448.7	gi|479324979|ref|YP_007865031.1|	-	0.0045	15.5	0.0	0.016	13.7	0.0	1.8	1	1	0	1	1	1	1	Acetyl	xylan	esterase	(AXE1)
UPF0227	PF05728.7	gi|479324979|ref|YP_007865031.1|	-	0.018	14.7	0.0	0.042	13.5	0.0	1.6	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0227)
Peptidase_S28	PF05577.7	gi|479324979|ref|YP_007865031.1|	-	0.089	11.3	0.0	0.15	10.6	0.0	1.2	1	0	0	1	1	1	0	Serine	carboxypeptidase	S28
Tannase	PF07519.6	gi|479324979|ref|YP_007865031.1|	-	0.12	11.0	0.0	0.28	9.8	0.0	1.5	1	0	0	1	1	1	0	Tannase	and	feruloyl	esterase
AIM24	PF01987.12	gi|479324980|ref|YP_007865032.1|	-	2.3e-57	193.9	0.8	2.6e-57	193.7	0.6	1.0	1	0	0	1	1	1	1	Mitochondrial	biogenesis	AIM24
DUF2361	PF10153.4	gi|479324981|ref|YP_007865033.1|	-	0.11	12.7	0.5	0.19	11.9	0.3	1.5	1	1	0	1	1	1	0	Uncharacterised	conserved	protein	(DUF2361)
GTPase_Cys_C	PF12631.2	gi|479324981|ref|YP_007865033.1|	-	0.13	12.6	0.0	0.15	12.5	0.0	1.1	1	0	0	1	1	1	0	Catalytic	cysteine-containing	C-terminus	of	GTPase,	MnmE
AAA_14	PF13173.1	gi|479324982|ref|YP_007865034.1|	-	4.6e-23	81.5	2.9	1.1e-22	80.3	0.1	2.5	3	0	0	3	3	3	1	AAA	domain
DUF4143	PF13635.1	gi|479324982|ref|YP_007865034.1|	-	6.5e-06	26.2	0.1	1.6e-05	24.9	0.1	1.8	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
Arch_ATPase	PF01637.13	gi|479324982|ref|YP_007865034.1|	-	0.00026	20.7	9.7	0.0021	17.7	0.0	3.6	2	1	0	3	3	3	1	Archaeal	ATPase
AAA_16	PF13191.1	gi|479324982|ref|YP_007865034.1|	-	0.00055	19.9	0.0	0.0031	17.5	0.0	2.2	3	0	0	3	3	3	1	AAA	ATPase	domain
FtsK_SpoIIIE	PF01580.13	gi|479324982|ref|YP_007865034.1|	-	0.0019	17.6	0.0	0.0035	16.8	0.0	1.3	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
HTH_11	PF08279.7	gi|479324982|ref|YP_007865034.1|	-	0.015	14.9	0.1	0.037	13.6	0.1	1.6	1	0	0	1	1	1	0	HTH	domain
NACHT	PF05729.7	gi|479324982|ref|YP_007865034.1|	-	0.015	14.9	0.0	0.062	12.9	0.0	2.0	1	1	0	1	1	1	0	NACHT	domain
FlaA	PF04620.7	gi|479324982|ref|YP_007865034.1|	-	0.016	14.5	0.1	0.054	12.8	0.0	1.8	2	0	0	2	2	2	0	Flagellar	filament	outer	layer	protein	Flaa
AAA_22	PF13401.1	gi|479324982|ref|YP_007865034.1|	-	0.02	15.0	0.2	0.098	12.8	0.0	2.4	3	1	0	3	3	2	0	AAA	domain
AAA_2	PF07724.9	gi|479324982|ref|YP_007865034.1|	-	0.025	14.4	0.0	0.066	13.1	0.0	1.7	1	0	0	1	1	1	0	AAA	domain	(Cdc48	subfamily)
AAA	PF00004.24	gi|479324982|ref|YP_007865034.1|	-	0.026	14.7	0.0	0.067	13.4	0.0	1.7	2	0	0	2	2	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
MobB	PF03205.9	gi|479324982|ref|YP_007865034.1|	-	0.045	13.4	0.0	0.15	11.7	0.0	1.9	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Radical_SAM	PF04055.16	gi|479324983|ref|YP_007865036.1|	-	2e-20	73.5	0.9	2.5e-19	70.0	0.1	2.3	1	1	1	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|479324983|ref|YP_007865036.1|	-	5.1e-11	42.8	0.1	3.4e-10	40.1	0.0	2.2	2	1	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|479324983|ref|YP_007865036.1|	-	6.4e-08	32.6	0.0	2.4e-07	30.7	0.0	2.0	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
SPASM	PF13186.1	gi|479324983|ref|YP_007865036.1|	-	0.0059	16.9	1.3	0.016	15.5	0.9	1.8	1	0	0	1	1	1	1	Iron-sulfur	cluster-binding	domain
LAGLIDADG_1	PF00961.14	gi|479324983|ref|YP_007865036.1|	-	0.021	15.3	0.2	0.32	11.5	0.0	2.4	2	0	0	2	2	2	0	LAGLIDADG	endonuclease
YwpF	PF14183.1	gi|479324983|ref|YP_007865036.1|	-	0.042	13.5	1.3	0.3	10.7	0.2	2.5	3	0	0	3	3	3	0	YwpF-like	protein
Lactamase_B	PF00753.22	gi|479324984|ref|YP_007865037.1|	-	3.9e-23	82.1	1.1	4.7e-23	81.8	0.7	1.1	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|479324984|ref|YP_007865037.1|	-	0.00051	19.6	0.1	0.00061	19.3	0.1	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Cupin_2	PF07883.6	gi|479324987|ref|YP_007865040.1|	-	4.9e-15	54.7	0.0	6.7e-15	54.3	0.0	1.2	1	0	0	1	1	1	1	Cupin	domain
AraC_binding	PF02311.14	gi|479324987|ref|YP_007865040.1|	-	4.1e-07	29.7	0.0	5.5e-07	29.3	0.0	1.1	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
MannoseP_isomer	PF01050.13	gi|479324987|ref|YP_007865040.1|	-	2e-06	27.5	0.1	2.4e-06	27.2	0.1	1.2	1	0	0	1	1	1	1	Mannose-6-phosphate	isomerase
Cupin_1	PF00190.17	gi|479324987|ref|YP_007865040.1|	-	2.5e-06	26.9	0.0	3.6e-06	26.4	0.0	1.3	1	0	0	1	1	1	1	Cupin
Ectoine_synth	PF06339.7	gi|479324987|ref|YP_007865040.1|	-	7.3e-05	22.6	0.2	9e-05	22.4	0.1	1.1	1	0	0	1	1	1	1	Ectoine	synthase
Cupin_3	PF05899.7	gi|479324987|ref|YP_007865040.1|	-	0.00086	18.6	0.0	0.0014	17.9	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF861)
DUF4437	PF14499.1	gi|479324987|ref|YP_007865040.1|	-	0.0061	15.4	0.0	0.0073	15.2	0.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4437)
Cupin_6	PF12852.2	gi|479324987|ref|YP_007865040.1|	-	0.0095	15.5	0.0	0.011	15.3	0.0	1.1	1	0	0	1	1	1	1	Cupin
Asp_Arg_Hydrox	PF05118.10	gi|479324987|ref|YP_007865040.1|	-	0.022	14.6	0.0	0.025	14.4	0.0	1.2	1	0	0	1	1	1	0	Aspartyl/Asparaginyl	beta-hydroxylase
EutQ	PF06249.7	gi|479324987|ref|YP_007865040.1|	-	0.085	12.4	0.1	0.1	12.1	0.1	1.1	1	0	0	1	1	1	0	Ethanolamine	utilisation	protein	EutQ
CENP-C_C	PF11699.3	gi|479324987|ref|YP_007865040.1|	-	0.099	12.6	0.1	0.18	11.7	0.1	1.4	1	0	0	1	1	1	0	Mif2/CENP-C	like
Hydantoinase_B	PF02538.9	gi|479324988|ref|YP_007865041.1|	-	9.5e-98	327.6	0.0	1.2e-97	327.4	0.0	1.1	1	0	0	1	1	1	1	Hydantoinase	B/oxoprolinase
Hydantoinase_A	PF01968.13	gi|479324989|ref|YP_007865042.1|	-	3.8e-90	301.9	0.3	4.3e-88	295.1	0.0	2.4	2	0	0	2	2	2	2	Hydantoinase/oxoprolinase
Hydant_A_N	PF05378.8	gi|479324989|ref|YP_007865042.1|	-	2.4e-54	183.4	0.4	8.3e-54	181.7	0.1	2.0	2	0	0	2	2	2	1	Hydantoinase/oxoprolinase	N-terminal	region
MutL	PF13941.1	gi|479324989|ref|YP_007865042.1|	-	0.026	12.8	0.3	4.1	5.6	0.1	2.2	2	0	0	2	2	2	0	MutL	protein
BcrAD_BadFG	PF01869.15	gi|479324989|ref|YP_007865042.1|	-	0.033	13.4	0.0	6.1	6.0	0.0	2.4	2	1	0	2	2	2	0	BadF/BadG/BcrA/BcrD	ATPase	family
HTH_AsnC-type	PF13404.1	gi|479324990|ref|YP_007865043.1|	-	5.2e-12	45.0	0.7	9.1e-12	44.3	0.5	1.4	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_24	PF13412.1	gi|479324990|ref|YP_007865043.1|	-	1.6e-09	36.9	1.4	3.2e-09	36.0	1.0	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
AsnC_trans_reg	PF01037.16	gi|479324990|ref|YP_007865043.1|	-	0.024	14.3	0.2	0.038	13.6	0.1	1.4	1	0	0	1	1	1	0	AsnC	family
HTH_11	PF08279.7	gi|479324990|ref|YP_007865043.1|	-	0.065	12.8	0.5	0.45	10.2	0.1	2.2	2	0	0	2	2	2	0	HTH	domain
Transp_cyt_pur	PF02133.10	gi|479324991|ref|YP_007865044.1|	-	4.9e-18	64.9	46.9	9.2e-18	64.0	32.5	1.5	1	1	0	1	1	1	1	Permease	for	cytosine/purines,	uracil,	thiamine,	allantoin
Vma12	PF11712.3	gi|479324991|ref|YP_007865044.1|	-	0.13	11.9	0.1	0.13	11.9	0.0	3.7	4	1	0	4	4	4	0	Endoplasmic	reticulum-based	factor	for	assembly	of	V-ATPase
UbiA	PF01040.13	gi|479324992|ref|YP_007865045.1|	-	0.0028	16.9	7.1	0.0035	16.6	4.9	1.1	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
DUF3815	PF12821.2	gi|479324992|ref|YP_007865045.1|	-	0.044	13.7	4.1	0.065	13.1	2.8	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3815)
Tic20	PF09685.5	gi|479324992|ref|YP_007865045.1|	-	0.36	10.8	14.9	0.74	9.8	3.0	2.1	2	0	0	2	2	2	0	Tic20-like	protein
DUF917	PF06032.7	gi|479324993|ref|YP_007865046.1|	-	5.1e-123	410.0	0.3	5.8e-123	409.9	0.2	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF917)
Hydantoinase_A	PF01968.13	gi|479324994|ref|YP_007865047.1|	-	5.6e-52	176.6	3.9	1.2e-50	172.2	1.0	2.9	2	1	0	2	2	2	1	Hydantoinase/oxoprolinase
Hydant_A_N	PF05378.8	gi|479324994|ref|YP_007865047.1|	-	5.6e-41	139.9	1.7	1e-38	132.6	0.2	2.9	3	0	0	3	3	3	2	Hydantoinase/oxoprolinase	N-terminal	region
MutL	PF13941.1	gi|479324994|ref|YP_007865047.1|	-	1e-07	30.6	1.6	0.0017	16.7	0.2	2.6	3	0	0	3	3	3	2	MutL	protein
BcrAD_BadFG	PF01869.15	gi|479324994|ref|YP_007865047.1|	-	0.00041	19.7	0.4	0.00041	19.7	0.3	2.9	3	1	0	3	3	3	1	BadF/BadG/BcrA/BcrD	ATPase	family
FtsA	PF14450.1	gi|479324994|ref|YP_007865047.1|	-	1	9.2	8.7	3	7.6	0.4	3.4	3	2	0	3	3	3	0	Cell	division	protein	FtsA
DUF917	PF06032.7	gi|479324995|ref|YP_007865048.1|	-	5.4e-101	337.6	0.0	6.1e-101	337.4	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF917)
HTH_10	PF04967.7	gi|479324996|ref|YP_007865049.1|	-	5.4e-22	77.1	0.1	8.4e-22	76.5	0.1	1.3	1	0	0	1	1	1	1	HTH	DNA	binding	domain
DUF134	PF02001.11	gi|479324996|ref|YP_007865049.1|	-	0.00014	21.7	0.0	0.00029	20.6	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF134
HTH_24	PF13412.1	gi|479324996|ref|YP_007865049.1|	-	0.011	15.1	0.7	0.069	12.5	0.0	2.6	3	0	0	3	3	3	0	Winged	helix-turn-helix	DNA-binding
MFS_1	PF07690.11	gi|479324997|ref|YP_007865050.1|	-	4.8e-33	114.3	73.1	3.5e-28	98.3	30.0	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|479324997|ref|YP_007865050.1|	-	7.7e-33	113.7	32.1	9.8e-33	113.3	22.2	1.1	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MR_MLE_C	PF13378.1	gi|479324998|ref|YP_007865051.1|	-	4.7e-17	61.9	0.0	9.9e-17	60.9	0.0	1.6	1	0	0	1	1	1	1	Enolase	C-terminal	domain-like
MR_MLE	PF01188.16	gi|479324998|ref|YP_007865051.1|	-	1.9e-15	57.0	0.0	8.6e-15	55.0	0.0	2.1	2	0	0	2	2	2	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
MR_MLE_N	PF02746.11	gi|479324998|ref|YP_007865051.1|	-	4.9e-05	23.2	0.0	8e-05	22.6	0.0	1.3	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	N-terminal	domain
ADH_N	PF08240.7	gi|479324999|ref|YP_007865052.1|	-	4e-29	100.5	0.5	6.8e-29	99.8	0.3	1.4	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|479324999|ref|YP_007865052.1|	-	4e-19	68.4	0.1	7.9e-19	67.4	0.0	1.5	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|479324999|ref|YP_007865052.1|	-	1.9e-11	44.9	0.1	3.8e-11	43.9	0.0	1.5	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
Lactamase_B	PF00753.22	gi|479325000|ref|YP_007865053.1|	-	6.1e-05	22.7	0.0	0.018	14.6	0.0	2.1	2	0	0	2	2	2	2	Metallo-beta-lactamase	superfamily
Asp_protease_2	PF13650.1	gi|479325001|ref|YP_007865054.1|	-	8.9e-08	32.5	0.0	1.1e-07	32.2	0.0	1.2	1	0	0	1	1	1	1	Aspartyl	protease
RVP	PF00077.15	gi|479325001|ref|YP_007865054.1|	-	2.3e-05	24.2	0.0	2.7e-05	24.0	0.0	1.1	1	0	0	1	1	1	1	Retroviral	aspartyl	protease
gag-asp_proteas	PF13975.1	gi|479325001|ref|YP_007865054.1|	-	4.2e-05	23.2	0.0	7.1e-05	22.5	0.0	1.3	1	0	0	1	1	1	1	gag-polyprotein	putative	aspartyl	protease
Methyltransf_26	PF13659.1	gi|479325002|ref|YP_007865055.1|	-	1.1e-20	73.7	0.0	1.8e-20	73.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|479325002|ref|YP_007865055.1|	-	8.5e-15	54.6	0.0	1.3e-14	54.0	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|479325002|ref|YP_007865055.1|	-	7.8e-12	45.7	0.0	1.3e-11	45.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|479325002|ref|YP_007865055.1|	-	1.9e-10	40.3	0.0	2.4e-10	40.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_23	PF13489.1	gi|479325002|ref|YP_007865055.1|	-	2.8e-10	40.1	0.0	1.1e-09	38.2	0.0	1.8	1	1	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|479325002|ref|YP_007865055.1|	-	8.1e-10	38.5	0.0	1.4e-09	37.7	0.0	1.4	1	1	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_25	PF13649.1	gi|479325002|ref|YP_007865055.1|	-	9.2e-10	38.7	0.0	2e-09	37.6	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
Eco57I	PF07669.6	gi|479325002|ref|YP_007865055.1|	-	3.4e-09	37.0	0.0	6e-09	36.2	0.0	1.4	1	0	0	1	1	1	1	Eco57I	restriction-modification	methylase
N6_Mtase	PF02384.11	gi|479325002|ref|YP_007865055.1|	-	1.4e-07	30.9	0.0	1.5e-07	30.7	0.0	1.1	1	0	0	1	1	1	1	N-6	DNA	Methylase
RrnaAD	PF00398.15	gi|479325002|ref|YP_007865055.1|	-	3.6e-07	29.4	0.0	5.2e-07	28.9	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_12	PF08242.7	gi|479325002|ref|YP_007865055.1|	-	1.1e-05	25.8	0.0	8.9e-05	22.9	0.0	2.1	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|479325002|ref|YP_007865055.1|	-	0.0014	19.1	0.0	0.053	14.0	0.0	2.3	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_32	PF13679.1	gi|479325002|ref|YP_007865055.1|	-	0.0037	16.9	0.0	0.0049	16.5	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|479325002|ref|YP_007865055.1|	-	0.0039	16.7	0.0	0.018	14.5	0.0	1.9	2	0	0	2	2	2	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Cons_hypoth95	PF03602.10	gi|479325002|ref|YP_007865055.1|	-	0.0042	16.5	0.0	0.0067	15.8	0.0	1.3	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
CMAS	PF02353.15	gi|479325002|ref|YP_007865055.1|	-	0.0072	15.4	0.1	0.05	12.6	0.0	2.0	1	1	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Ubie_methyltran	PF01209.13	gi|479325002|ref|YP_007865055.1|	-	0.015	14.4	0.0	0.092	11.8	0.0	1.9	2	0	0	2	2	2	0	ubiE/COQ5	methyltransferase	family
Pox_MCEL	PF03291.11	gi|479325002|ref|YP_007865055.1|	-	0.029	13.2	0.0	0.059	12.2	0.0	1.5	2	0	0	2	2	2	0	mRNA	capping	enzyme
MetW	PF07021.7	gi|479325002|ref|YP_007865055.1|	-	0.058	12.7	0.0	0.086	12.2	0.0	1.3	1	0	0	1	1	1	0	Methionine	biosynthesis	protein	MetW
PrmA	PF06325.8	gi|479325002|ref|YP_007865055.1|	-	0.14	11.2	0.0	0.26	10.3	0.0	1.4	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
SOCS_box	PF07525.11	gi|479325003|ref|YP_007865056.1|	-	0.078	12.8	0.3	1.4	8.8	0.0	2.1	2	0	0	2	2	2	0	SOCS	box
Mrr_cat	PF04471.7	gi|479325005|ref|YP_007865058.1|	-	0.0051	16.5	0.0	0.009	15.8	0.0	1.4	1	0	0	1	1	1	1	Restriction	endonuclease
NblA	PF04485.7	gi|479325005|ref|YP_007865058.1|	-	0.058	13.2	1.1	1.2	9.0	0.0	2.7	3	0	0	3	3	3	0	Phycobilisome	degradation	protein	nblA
DUF4143	PF13635.1	gi|479325005|ref|YP_007865058.1|	-	0.21	11.7	0.7	0.48	10.6	0.0	1.8	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4143)
PDDEXK_1	PF12705.2	gi|479325006|ref|YP_007865059.1|	-	9.8e-08	31.6	0.1	2.3e-06	27.1	0.0	1.8	1	1	1	2	2	2	2	PD-(D/E)XK	nuclease	superfamily
Cas_Cas4	PF01930.12	gi|479325006|ref|YP_007865059.1|	-	1.3e-07	31.7	0.4	2.3e-07	30.8	0.3	1.4	1	1	0	1	1	1	1	Domain	of	unknown	function	DUF83
PDDEXK_3	PF13366.1	gi|479325006|ref|YP_007865059.1|	-	0.0028	17.7	0.2	0.006	16.6	0.1	1.5	1	1	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
Dna2	PF08696.6	gi|479325006|ref|YP_007865059.1|	-	0.029	13.6	0.0	0.043	13.1	0.0	1.3	1	0	0	1	1	1	0	DNA	replication	factor	Dna2
Arb2	PF09757.4	gi|479325006|ref|YP_007865059.1|	-	0.042	13.2	0.0	0.062	12.7	0.0	1.3	1	0	0	1	1	1	0	Arb2	domain
DUF1703	PF08011.6	gi|479325006|ref|YP_007865059.1|	-	0.085	12.5	0.0	0.24	11.1	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1703)
DUF3990	PF13151.1	gi|479325006|ref|YP_007865059.1|	-	0.12	11.7	0.0	0.2	11.0	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3990)
Arch_ATPase	PF01637.13	gi|479325007|ref|YP_007865060.1|	-	1.6e-28	100.0	0.9	1.6e-28	100.0	0.7	1.4	2	0	0	2	2	2	1	Archaeal	ATPase
AAA_14	PF13173.1	gi|479325007|ref|YP_007865060.1|	-	0.00041	20.2	0.2	0.0015	18.4	0.0	2.0	1	1	1	2	2	2	1	AAA	domain
DUF3800	PF12686.2	gi|479325007|ref|YP_007865060.1|	-	0.0034	17.0	1.9	0.0034	17.0	1.3	2.0	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF3800)
AAA_22	PF13401.1	gi|479325007|ref|YP_007865060.1|	-	0.023	14.8	0.0	0.081	13.0	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
FAA_hydrolase	PF01557.13	gi|479325008|ref|YP_007865061.1|	-	7.6e-45	153.0	0.0	9.2e-45	152.7	0.0	1.1	1	0	0	1	1	1	1	Fumarylacetoacetate	(FAA)	hydrolase	family
Lactamase_B	PF00753.22	gi|479325009|ref|YP_007865062.1|	-	1.6e-22	80.0	0.0	2.1e-22	79.7	0.0	1.1	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|479325009|ref|YP_007865062.1|	-	2.8e-05	23.7	0.1	4.6e-05	23.0	0.1	1.4	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
HTH_10	PF04967.7	gi|479325010|ref|YP_007865063.1|	-	4.3e-20	71.0	0.0	9.1e-20	69.9	0.0	1.6	1	0	0	1	1	1	1	HTH	DNA	binding	domain
HTH_30	PF13556.1	gi|479325010|ref|YP_007865063.1|	-	0.0087	15.6	0.0	0.017	14.7	0.0	1.4	1	0	0	1	1	1	1	PucR	C-terminal	helix-turn-helix	domain
Peroxin-22	PF12827.2	gi|479325010|ref|YP_007865063.1|	-	0.068	12.8	1.0	0.17	11.5	0.7	1.8	1	1	0	1	1	1	0	Peroxisomal	biogenesis	protein	family
HTH_24	PF13412.1	gi|479325010|ref|YP_007865063.1|	-	0.094	12.1	0.7	0.52	9.7	0.0	2.4	2	1	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
HgmA	PF04209.8	gi|479325011|ref|YP_007865064.1|	-	1.8e-81	273.7	0.0	2.3e-81	273.3	0.0	1.0	1	0	0	1	1	1	1	homogentisate	1,2-dioxygenase
Cupin_2	PF07883.6	gi|479325011|ref|YP_007865064.1|	-	0.0001	21.7	0.1	0.0006	19.2	0.0	2.2	2	0	0	2	2	2	1	Cupin	domain
Cupin_3	PF05899.7	gi|479325011|ref|YP_007865064.1|	-	0.0044	16.3	0.0	0.01	15.2	0.0	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF861)
EutQ	PF06249.7	gi|479325011|ref|YP_007865064.1|	-	0.16	11.4	0.1	0.32	10.5	0.1	1.4	1	0	0	1	1	1	0	Ethanolamine	utilisation	protein	EutQ
Bac_luciferase	PF00296.15	gi|479325012|ref|YP_007865065.1|	-	1.8e-51	175.0	0.0	2.4e-51	174.6	0.0	1.1	1	0	0	1	1	1	1	Luciferase-like	monooxygenase
Cyclase	PF04199.8	gi|479325013|ref|YP_007865066.1|	-	4.6e-27	94.7	0.0	6.1e-27	94.3	0.0	1.1	1	0	0	1	1	1	1	Putative	cyclase
DEDD_Tnp_IS110	PF01548.12	gi|479325014|ref|YP_007865067.1|	-	7.9e-29	100.1	0.1	2.1e-28	98.8	0.0	1.7	2	0	0	2	2	2	1	Transposase
Transposase_20	PF02371.11	gi|479325014|ref|YP_007865067.1|	-	5.6e-22	77.6	0.0	1e-21	76.8	0.0	1.4	1	0	0	1	1	1	1	Transposase	IS116/IS110/IS902	family
S10_plectin	PF03501.10	gi|479325014|ref|YP_007865067.1|	-	0.025	14.4	0.1	0.4	10.5	0.0	2.8	3	0	0	3	3	3	0	Plectin/S10	domain
Peptidase_S48	PF03574.10	gi|479325014|ref|YP_007865067.1|	-	0.084	12.8	0.1	0.19	11.6	0.1	1.6	1	0	0	1	1	1	0	Peptidase	family	S48
Cas_Cmr3	PF09700.5	gi|479325015|ref|YP_007865068.1|	-	2.7e-15	56.6	0.0	8.5e-07	28.7	0.0	2.8	1	1	1	2	2	2	2	CRISPR-associated	protein	(Cas_Cmr3)
DUF3692	PF12469.3	gi|479325016|ref|YP_007865069.1|	-	2.3e-22	79.4	0.0	1e-21	77.3	0.0	2.1	1	0	0	1	1	1	1	CRISPR-associated	protein
Zn_ribbon_2	PF12674.2	gi|479325016|ref|YP_007865069.1|	-	0.031	14.6	0.2	0.11	12.9	0.1	2.0	1	0	0	1	1	1	0	Putative	zinc	ribbon	domain
RAMPs	PF03787.10	gi|479325017|ref|YP_007865070.1|	-	2.6e-10	40.5	1.2	1.2e-09	38.3	0.2	2.4	2	1	0	2	2	2	1	RAMP	superfamily
Cas_Cmr5	PF09701.5	gi|479325018|ref|YP_007865071.1|	-	8.1e-07	29.2	0.0	9.7e-07	28.9	0.0	1.1	1	0	0	1	1	1	1	CRISPR-associated	protein	(Cas_Cmr5)
RAMPs	PF03787.10	gi|479325020|ref|YP_007865073.1|	-	9.5e-26	90.9	0.0	1.1e-25	90.7	0.0	1.0	1	0	0	1	1	1	1	RAMP	superfamily
NeuB	PF03102.9	gi|479325020|ref|YP_007865073.1|	-	0.12	11.4	0.0	0.18	10.8	0.0	1.2	1	0	0	1	1	1	0	NeuB	family
DEAD	PF00270.24	gi|479325021|ref|YP_007865074.1|	-	4.7e-08	32.7	0.0	2.2e-06	27.2	0.0	2.7	3	0	0	3	3	3	1	DEAD/DEAH	box	helicase
ResIII	PF04851.10	gi|479325021|ref|YP_007865074.1|	-	8.5e-05	22.4	0.0	0.00036	20.4	0.0	2.1	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
PhoH	PF02562.11	gi|479325021|ref|YP_007865074.1|	-	0.024	13.8	0.0	0.048	12.8	0.0	1.4	1	0	0	1	1	1	0	PhoH-like	protein
Helicase_C	PF00271.26	gi|479325021|ref|YP_007865074.1|	-	0.058	13.2	0.0	0.2	11.5	0.0	2.0	1	0	0	1	1	1	0	Helicase	conserved	C-terminal	domain
AAA_19	PF13245.1	gi|479325021|ref|YP_007865074.1|	-	0.36	10.6	0.7	0.94	9.2	0.0	1.9	2	0	0	2	2	2	0	Part	of	AAA	domain
V-SNARE	PF05008.10	gi|479325024|ref|YP_007865077.1|	-	0.02	15.0	4.1	0.023	14.8	0.4	2.8	3	0	0	3	3	3	0	Vesicle	transport	v-SNARE	protein	N-terminus
HTH_27	PF13463.1	gi|479325025|ref|YP_007865078.1|	-	0.0072	16.6	0.1	0.022	15.0	0.0	1.9	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_5	PF01022.15	gi|479325025|ref|YP_007865078.1|	-	0.014	15.0	3.6	0.016	14.8	0.2	2.7	3	0	0	3	3	3	0	Bacterial	regulatory	protein,	arsR	family
HTH_11	PF08279.7	gi|479325025|ref|YP_007865078.1|	-	0.016	14.8	0.4	0.042	13.5	0.2	1.7	1	0	0	1	1	1	0	HTH	domain
HTH_38	PF13936.1	gi|479325025|ref|YP_007865078.1|	-	0.033	13.7	0.3	0.09	12.3	0.1	1.8	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|479325025|ref|YP_007865078.1|	-	0.038	13.6	0.0	0.088	12.4	0.0	1.6	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_1	PF00126.22	gi|479325025|ref|YP_007865078.1|	-	0.052	13.2	0.0	0.08	12.6	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
FTCD_N	PF07837.7	gi|479325025|ref|YP_007865078.1|	-	0.066	12.7	0.3	0.15	11.6	0.1	1.6	2	0	0	2	2	2	0	Formiminotransferase	domain,	N-terminal	subdomain
HTH_40	PF14493.1	gi|479325025|ref|YP_007865078.1|	-	0.067	13.4	0.4	0.46	10.7	0.0	2.2	2	0	0	2	2	2	0	Helix-turn-helix	domain
DUF2276	PF10040.4	gi|479325026|ref|YP_007865079.1|	-	1.4e-11	44.6	0.0	2e-11	44.1	0.0	1.3	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2276)
Cas_Cas6	PF01881.11	gi|479325026|ref|YP_007865079.1|	-	1.9	8.7	7.8	0.43	10.7	2.7	2.1	2	1	0	2	2	2	0	CRISPR	associated	protein	Cas6
Cas_Cas1	PF01867.11	gi|479325027|ref|YP_007865080.1|	-	5.3e-44	150.3	0.1	6.7e-44	150.0	0.0	1.1	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas1
DRTGG	PF07085.7	gi|479325027|ref|YP_007865080.1|	-	0.072	12.6	0.2	0.13	11.8	0.1	1.4	1	0	0	1	1	1	0	DRTGG	domain
EF_assoc_2	PF08356.7	gi|479325027|ref|YP_007865080.1|	-	0.074	12.8	0.1	0.16	11.7	0.1	1.5	1	0	0	1	1	1	0	EF	hand	associated
Cas_Cas4	PF01930.12	gi|479325028|ref|YP_007865081.1|	-	0.016	15.1	1.0	0.45	10.4	0.2	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF83
Eaf7	PF07904.8	gi|479325030|ref|YP_007865083.1|	-	0.11	12.4	0.1	0.12	12.3	0.1	1.2	1	0	0	1	1	1	0	Chromatin	modification-related	protein	EAF7
AAA_10	PF12846.2	gi|479325031|ref|YP_007865084.1|	-	2.2e-17	63.4	0.6	9.5e-12	44.9	0.0	2.3	2	0	0	2	2	2	2	AAA-like	domain
DUF87	PF01935.12	gi|479325031|ref|YP_007865084.1|	-	8.8e-13	48.5	1.6	4.7e-12	46.2	1.1	2.3	1	1	0	1	1	1	1	Domain	of	unknown	function	DUF87
DUF853	PF05872.7	gi|479325031|ref|YP_007865084.1|	-	4.4e-09	35.2	0.0	0.00063	18.2	0.0	2.1	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
FtsK_SpoIIIE	PF01580.13	gi|479325031|ref|YP_007865084.1|	-	1e-08	34.8	0.2	0.00033	20.1	0.1	2.3	2	0	0	2	2	2	2	FtsK/SpoIIIE	family
AAA	PF00004.24	gi|479325031|ref|YP_007865084.1|	-	2.4e-06	27.7	0.6	0.031	14.4	0.0	2.7	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
TrwB_AAD_bind	PF10412.4	gi|479325031|ref|YP_007865084.1|	-	3.7e-06	25.8	0.1	6.9e-06	24.9	0.0	1.3	1	0	0	1	1	1	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
ResIII	PF04851.10	gi|479325031|ref|YP_007865084.1|	-	0.0008	19.2	0.2	0.79	9.5	0.0	2.3	2	0	0	2	2	2	2	Type	III	restriction	enzyme,	res	subunit
NACHT	PF05729.7	gi|479325031|ref|YP_007865084.1|	-	0.0022	17.6	0.1	0.78	9.3	0.0	2.3	2	0	0	2	2	2	1	NACHT	domain
Zot	PF05707.7	gi|479325031|ref|YP_007865084.1|	-	0.0031	16.9	0.0	0.014	14.8	0.0	2.0	2	0	0	2	2	2	1	Zonular	occludens	toxin	(Zot)
ABC_tran	PF00005.22	gi|479325031|ref|YP_007865084.1|	-	0.0035	17.6	0.0	0.012	15.9	0.0	1.9	2	0	0	2	2	1	1	ABC	transporter
AAA_22	PF13401.1	gi|479325031|ref|YP_007865084.1|	-	0.0056	16.8	0.0	0.56	10.3	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
DEAD	PF00270.24	gi|479325031|ref|YP_007865084.1|	-	0.0064	16.0	0.1	3.1	7.2	0.0	2.3	2	0	0	2	2	2	2	DEAD/DEAH	box	helicase
Zeta_toxin	PF06414.7	gi|479325031|ref|YP_007865084.1|	-	0.01	14.9	0.0	0.025	13.7	0.0	1.6	1	0	0	1	1	1	0	Zeta	toxin
DUF2075	PF09848.4	gi|479325031|ref|YP_007865084.1|	-	0.016	14.1	0.3	0.77	8.6	0.0	2.2	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
Arch_ATPase	PF01637.13	gi|479325031|ref|YP_007865084.1|	-	0.02	14.6	0.2	0.33	10.6	0.0	2.2	2	0	0	2	2	2	0	Archaeal	ATPase
AAA_23	PF13476.1	gi|479325031|ref|YP_007865084.1|	-	0.029	14.6	0.2	1.3	9.3	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
cobW	PF02492.14	gi|479325031|ref|YP_007865084.1|	-	0.035	13.5	0.1	0.18	11.2	0.0	2.0	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
T2SE	PF00437.15	gi|479325031|ref|YP_007865084.1|	-	0.037	12.9	0.0	0.073	11.9	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
RuvB_N	PF05496.7	gi|479325031|ref|YP_007865084.1|	-	0.087	11.8	0.0	0.22	10.5	0.0	1.6	2	0	0	2	2	2	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
Miro	PF08477.8	gi|479325031|ref|YP_007865084.1|	-	0.099	13.1	0.0	0.26	11.8	0.0	1.7	1	0	0	1	1	1	0	Miro-like	protein
AAA_18	PF13238.1	gi|479325031|ref|YP_007865084.1|	-	0.28	11.5	3.1	0.38	11.0	0.0	2.7	3	1	1	4	4	4	0	AAA	domain
NurA	PF09376.5	gi|479325032|ref|YP_007865085.1|	-	3.8e-10	39.6	2.2	5.2e-10	39.2	1.5	1.2	1	0	0	1	1	1	1	NurA	domain
DoxA	PF07680.6	gi|479325033|ref|YP_007865086.1|	-	0.094	12.3	0.0	0.14	11.8	0.0	1.2	1	0	0	1	1	1	0	TQO	small	subunit	DoxA
PIN	PF01850.16	gi|479325034|ref|YP_007865087.1|	-	8.3e-08	32.5	0.5	1.1e-07	32.2	0.4	1.1	1	0	0	1	1	1	1	PIN	domain
CcdA	PF07362.7	gi|479325035|ref|YP_007865088.1|	-	2e-07	30.7	5.5	3.2e-07	30.1	3.8	1.4	1	1	0	1	1	1	1	Post-segregation	antitoxin	CcdA
RHH_1	PF01402.16	gi|479325035|ref|YP_007865088.1|	-	1.5e-05	24.6	1.3	1.5e-05	24.6	0.9	2.4	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
DUF3486	PF11985.3	gi|479325035|ref|YP_007865088.1|	-	0.0018	18.3	8.1	0.0023	18.0	5.4	1.3	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF3486)
Staphopain_pro	PF14731.1	gi|479325035|ref|YP_007865088.1|	-	0.0097	15.6	0.2	0.018	14.8	0.0	1.4	1	1	1	2	2	2	1	Staphopain	proregion
Rotamase_3	PF13616.1	gi|479325035|ref|YP_007865088.1|	-	0.049	13.8	0.8	0.053	13.7	0.5	1.1	1	0	0	1	1	1	0	PPIC-type	PPIASE	domain
PHP	PF02811.14	gi|479325035|ref|YP_007865088.1|	-	0.062	13.0	0.2	0.062	13.0	0.1	1.0	1	0	0	1	1	1	0	PHP	domain
HTH_AsnC-type	PF13404.1	gi|479325035|ref|YP_007865088.1|	-	0.092	12.3	0.0	0.21	11.1	0.0	1.7	1	1	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
Rho_N	PF07498.7	gi|479325035|ref|YP_007865088.1|	-	0.13	12.0	3.2	0.15	11.8	0.5	2.0	2	0	0	2	2	2	0	Rho	termination	factor,	N-terminal	domain
DUF2316	PF10078.4	gi|479325035|ref|YP_007865088.1|	-	0.13	12.2	1.2	0.3	11.0	0.4	1.8	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2316)
DUF1947	PF09183.5	gi|479325035|ref|YP_007865088.1|	-	0.18	11.5	1.2	0.22	11.2	0.3	1.6	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF1947)
GvpK	PF05121.7	gi|479325035|ref|YP_007865088.1|	-	0.38	10.5	4.3	0.5	10.2	3.0	1.3	1	0	0	1	1	1	0	Gas	vesicle	protein	K
Histone_HNS	PF00816.16	gi|479325035|ref|YP_007865088.1|	-	0.4	11.2	7.3	5.9	7.4	3.4	2.0	1	1	1	2	2	2	0	H-NS	histone	family
eIF3_N	PF09440.5	gi|479325035|ref|YP_007865088.1|	-	0.51	10.5	3.6	0.6	10.2	2.5	1.1	1	0	0	1	1	1	0	eIF3	subunit	6	N	terminal	domain
DUF749	PF05370.6	gi|479325035|ref|YP_007865088.1|	-	0.59	10.1	4.1	1.1	9.2	0.1	2.3	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF749)
CRF	PF00473.12	gi|479325035|ref|YP_007865088.1|	-	1.2	9.2	5.5	0.25	11.4	1.1	1.9	2	0	0	2	2	2	0	Corticotropin-releasing	factor	family
Casc1	PF12366.3	gi|479325035|ref|YP_007865088.1|	-	2.1	7.8	6.1	2.2	7.7	4.2	1.0	1	0	0	1	1	1	0	Cancer	susceptibility	candidate	1
DUF1682	PF07946.9	gi|479325035|ref|YP_007865088.1|	-	9.6	4.9	14.5	10	4.8	10.1	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1682)
ABC2_membrane_2	PF12679.2	gi|479325036|ref|YP_007865089.1|	-	5.3e-17	61.5	19.6	1.5e-16	60.1	13.6	1.8	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|479325036|ref|YP_007865089.1|	-	9.7e-08	31.4	43.5	9.7e-08	31.4	30.2	3.3	2	2	0	3	3	3	2	ABC-2	family	transporter	protein
DUF4480	PF13715.1	gi|479325036|ref|YP_007865089.1|	-	2e-07	30.9	0.4	6.1e-07	29.4	0.1	2.0	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4480)
CarboxypepD_reg	PF13620.1	gi|479325036|ref|YP_007865089.1|	-	0.00037	20.4	0.0	0.00086	19.3	0.0	1.6	1	0	0	1	1	1	1	Carboxypeptidase	regulatory-like	domain
ABC2_membrane_3	PF12698.2	gi|479325036|ref|YP_007865089.1|	-	3.2	6.7	56.2	12	4.8	39.0	1.9	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
ABC_tran	PF00005.22	gi|479325037|ref|YP_007865090.1|	-	1.1e-24	87.2	0.0	3.2e-24	85.7	0.0	1.7	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|479325037|ref|YP_007865090.1|	-	6e-12	46.1	3.9	4.7e-11	43.1	0.5	2.5	2	1	0	2	2	2	1	AAA	domain
SRP54	PF00448.17	gi|479325037|ref|YP_007865090.1|	-	0.00047	19.6	0.2	0.007	15.8	0.0	2.2	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
AAA_23	PF13476.1	gi|479325037|ref|YP_007865090.1|	-	0.0042	17.4	2.7	0.0099	16.2	1.9	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|479325037|ref|YP_007865090.1|	-	0.011	15.1	0.4	0.37	10.1	0.0	2.1	2	0	0	2	2	2	0	AAA-like	domain
AAA_29	PF13555.1	gi|479325037|ref|YP_007865090.1|	-	0.019	14.4	0.1	0.046	13.2	0.1	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
MobB	PF03205.9	gi|479325037|ref|YP_007865090.1|	-	0.027	14.1	0.4	0.074	12.7	0.1	1.9	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_33	PF13671.1	gi|479325037|ref|YP_007865090.1|	-	0.07	12.9	0.0	0.14	11.9	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_17	PF13207.1	gi|479325037|ref|YP_007865090.1|	-	0.1	13.4	0.1	0.34	11.7	0.1	2.2	1	1	0	1	1	1	0	AAA	domain
IU_nuc_hydro	PF01156.14	gi|479325038|ref|YP_007865091.1|	-	2.7e-71	240.3	0.0	3.2e-71	240.0	0.0	1.0	1	0	0	1	1	1	1	Inosine-uridine	preferring	nucleoside	hydrolase
BtpA	PF03437.10	gi|479325039|ref|YP_007865092.1|	-	2.4e-76	256.3	0.0	2.6e-76	256.2	0.0	1.0	1	0	0	1	1	1	1	BtpA	family
Trp_syntA	PF00290.15	gi|479325039|ref|YP_007865092.1|	-	0.0019	16.7	0.0	0.0091	14.5	0.0	1.9	2	0	0	2	2	2	1	Tryptophan	synthase	alpha	chain
PcrB	PF01884.12	gi|479325039|ref|YP_007865092.1|	-	0.0027	17.0	0.0	0.0083	15.3	0.0	1.8	2	0	0	2	2	2	1	PcrB	family
His_biosynth	PF00977.16	gi|479325039|ref|YP_007865092.1|	-	0.03	13.6	0.0	0.049	12.9	0.0	1.5	1	0	0	1	1	1	0	Histidine	biosynthesis	protein
Transp_cyt_pur	PF02133.10	gi|479325040|ref|YP_007865093.1|	-	6.5e-13	48.0	38.8	3e-12	45.8	26.9	1.8	1	1	0	1	1	1	1	Permease	for	cytosine/purines,	uracil,	thiamine,	allantoin
Lysis_S	PF04971.7	gi|479325040|ref|YP_007865093.1|	-	7.4	6.3	14.4	2	8.1	0.2	4.6	3	2	2	5	5	5	0	Lysis	protein	S
DUF86	PF01934.12	gi|479325042|ref|YP_007865095.1|	-	2.1e-17	62.8	0.6	2.3e-17	62.7	0.4	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF86
DUF2410	PF10307.4	gi|479325042|ref|YP_007865095.1|	-	0.059	12.7	0.2	0.072	12.4	0.2	1.2	1	0	0	1	1	1	0	Hypothetical	protein	(DUF2410)
bPH_4	PF06713.6	gi|479325042|ref|YP_007865095.1|	-	0.1	12.5	0.3	0.19	11.6	0.2	1.5	1	0	0	1	1	1	0	Bacterial	PH	domain
BEN	PF10523.4	gi|479325042|ref|YP_007865095.1|	-	0.72	9.9	2.8	1.5	8.9	1.5	1.7	2	0	0	2	2	2	0	BEN	domain
DUF4564	PF15169.1	gi|479325043|ref|YP_007865096.1|	-	0.029	14.1	0.1	0.046	13.4	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4564)
PIN	PF01850.16	gi|479325044|ref|YP_007865097.1|	-	1.2e-16	61.1	0.3	1.4e-16	60.9	0.2	1.0	1	0	0	1	1	1	1	PIN	domain
CcdA	PF07362.7	gi|479325045|ref|YP_007865098.1|	-	0.0019	18.0	0.1	0.0027	17.5	0.1	1.3	1	0	0	1	1	1	1	Post-segregation	antitoxin	CcdA
RelB	PF04221.7	gi|479325045|ref|YP_007865098.1|	-	0.0022	17.7	0.0	0.0028	17.3	0.0	1.3	1	0	0	1	1	1	1	RelB	antitoxin
RHH_3	PF12651.2	gi|479325045|ref|YP_007865098.1|	-	0.049	13.3	2.1	0.13	12.0	1.4	1.7	1	0	0	1	1	1	0	Ribbon-helix-helix	domain
Aldolase_2	PF10120.4	gi|479325045|ref|YP_007865098.1|	-	0.067	12.5	0.2	0.076	12.3	0.2	1.1	1	0	0	1	1	1	0	Putative	aldolase
DUF4337	PF14235.1	gi|479325045|ref|YP_007865098.1|	-	0.067	13.0	0.5	0.071	12.9	0.3	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4337)
RolB_RolC	PF02027.12	gi|479325045|ref|YP_007865098.1|	-	0.12	11.4	0.5	2.5	7.2	0.1	2.0	1	1	1	2	2	2	0	RolB/RolC	glucosidase	family
RHH_1	PF01402.16	gi|479325045|ref|YP_007865098.1|	-	0.21	11.5	9.0	0.12	12.3	2.3	3.2	2	1	1	3	3	3	0	Ribbon-helix-helix	protein,	copG	family
Antitoxin-MazE	PF04014.13	gi|479325046|ref|YP_007865099.1|	-	7.9e-14	51.0	0.2	1.3e-13	50.3	0.1	1.3	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
CDC48_N	PF02359.13	gi|479325046|ref|YP_007865099.1|	-	0.0015	18.4	0.1	0.068	13.1	0.1	2.1	1	1	0	1	1	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
Imm45	PF15603.1	gi|479325046|ref|YP_007865099.1|	-	0.0044	17.1	1.0	0.0048	17.0	0.7	1.0	1	0	0	1	1	1	1	Immunity	protein	45
DUF1905	PF08922.6	gi|479325046|ref|YP_007865099.1|	-	0.01	15.3	0.1	0.036	13.6	0.0	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1905)
PIN	PF01850.16	gi|479325047|ref|YP_007865100.1|	-	2.7e-19	69.6	1.0	3.1e-19	69.5	0.7	1.0	1	0	0	1	1	1	1	PIN	domain
UPF0278	PF08745.6	gi|479325047|ref|YP_007865100.1|	-	0.00052	19.3	0.2	0.0024	17.1	0.0	2.0	2	1	0	2	2	2	1	UPF0278	family
PIN_4	PF13638.1	gi|479325047|ref|YP_007865100.1|	-	0.027	14.5	1.4	0.19	11.8	1.0	2.0	1	1	0	1	1	1	0	PIN	domain
adh_short_C2	PF13561.1	gi|479325048|ref|YP_007865101.1|	-	1.2e-38	133.3	0.3	1.4e-38	133.0	0.2	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|479325048|ref|YP_007865101.1|	-	4.1e-28	98.3	0.1	5.3e-28	98.0	0.1	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|479325048|ref|YP_007865101.1|	-	1e-15	57.8	0.0	1.4e-15	57.4	0.0	1.1	1	0	0	1	1	1	1	KR	domain
DUF1776	PF08643.5	gi|479325048|ref|YP_007865101.1|	-	0.0039	16.3	0.0	0.0043	16.2	0.0	1.2	1	0	0	1	1	1	1	Fungal	family	of	unknown	function	(DUF1776)
Epimerase	PF01370.16	gi|479325048|ref|YP_007865101.1|	-	0.0075	15.7	0.9	0.047	13.1	0.7	1.9	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
THF_DHG_CYH_C	PF02882.14	gi|479325048|ref|YP_007865101.1|	-	0.014	14.4	0.1	0.16	11.0	0.0	2.0	2	0	0	2	2	2	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
Methyltransf_25	PF13649.1	gi|479325048|ref|YP_007865101.1|	-	0.029	14.7	0.0	0.05	13.9	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
DUF43	PF01861.11	gi|479325048|ref|YP_007865101.1|	-	0.052	12.5	0.2	0.14	11.1	0.0	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF43
Peptidase_S58	PF03576.9	gi|479325049|ref|YP_007865102.1|	-	1.1e-29	103.7	1.7	1.5e-29	103.2	1.2	1.1	1	0	0	1	1	1	1	Peptidase	family	S58
DUF2881	PF11087.3	gi|479325049|ref|YP_007865102.1|	-	2	7.9	6.1	8.6	5.9	0.1	2.7	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2881)
MFS_1	PF07690.11	gi|479325050|ref|YP_007865103.1|	-	5.4e-25	87.8	79.5	2.8e-21	75.6	32.2	2.6	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|479325050|ref|YP_007865103.1|	-	8.1e-15	54.3	44.8	6.1e-12	44.8	31.0	2.1	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
Aminotran_3	PF00202.16	gi|479325051|ref|YP_007865104.1|	-	5.6e-13	48.4	0.0	6.5e-13	48.2	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-III
AA_permease	PF00324.16	gi|479325052|ref|YP_007865105.1|	-	1.9e-89	300.2	53.8	2.8e-89	299.6	37.3	1.3	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease_2	PF13520.1	gi|479325052|ref|YP_007865105.1|	-	3.7e-15	55.4	60.5	5e-15	54.9	42.0	1.2	1	0	0	1	1	1	1	Amino	acid	permease
Metallophos	PF00149.23	gi|479325053|ref|YP_007865106.1|	-	3.5e-10	39.6	4.9	1.1e-09	37.9	3.4	1.8	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|479325053|ref|YP_007865106.1|	-	6.1e-09	35.9	0.0	4.4e-08	33.1	0.0	2.0	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos_3	PF14582.1	gi|479325053|ref|YP_007865106.1|	-	3e-07	29.8	0.2	6.1e-05	22.3	0.0	2.3	2	0	0	2	2	2	2	Metallophosphoesterase,	calcineurin	superfamily
Arginase	PF00491.16	gi|479325054|ref|YP_007865107.1|	-	1.7e-35	122.6	0.0	2.1e-35	122.3	0.0	1.0	1	0	0	1	1	1	1	Arginase	family
Peptidase_M20	PF01546.23	gi|479325055|ref|YP_007865108.1|	-	7e-33	113.7	0.0	9.9e-33	113.2	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|479325055|ref|YP_007865108.1|	-	5.8e-21	74.3	0.0	2e-20	72.5	0.0	1.9	2	0	0	2	2	2	1	Peptidase	dimerisation	domain
Aminotran_3	PF00202.16	gi|479325056|ref|YP_007865109.1|	-	2.7e-88	296.0	0.0	3.2e-88	295.8	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
AAA_17	PF13207.1	gi|479325057|ref|YP_007865110.1|	-	0.0089	16.8	0.0	0.01	16.6	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|479325057|ref|YP_007865110.1|	-	0.05	13.9	0.0	0.052	13.8	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
UPF0079	PF02367.12	gi|479325057|ref|YP_007865110.1|	-	0.14	11.8	0.0	0.15	11.7	0.0	1.2	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
XdhC_C	PF13478.1	gi|479325058|ref|YP_007865111.1|	-	9.4e-22	77.7	0.0	1.2e-21	77.4	0.0	1.1	1	0	0	1	1	1	1	XdhC	Rossmann	domain
OmpA	PF00691.15	gi|479325058|ref|YP_007865111.1|	-	0.13	12.6	0.0	0.19	12.1	0.0	1.4	1	0	0	1	1	1	0	OmpA	family
AA_permease	PF00324.16	gi|479325059|ref|YP_007865112.1|	-	8.4e-10	37.5	49.8	5e-09	35.0	34.5	2.0	1	1	0	1	1	1	1	Amino	acid	permease
DUF788	PF05620.6	gi|479325059|ref|YP_007865112.1|	-	0.085	12.7	0.3	0.085	12.7	0.2	3.0	4	1	0	4	4	4	0	Protein	of	unknown	function	(DUF788)
DUF1890	PF09001.6	gi|479325060|ref|YP_007865113.1|	-	0.041	13.8	0.0	0.095	12.7	0.0	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1890)
PaREP1	PF05942.6	gi|479325061|ref|YP_007865114.1|	-	4.3e-35	120.0	5.5	5.5e-35	119.7	3.8	1.1	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
DUF357	PF04010.8	gi|479325061|ref|YP_007865114.1|	-	0.00043	19.9	2.2	0.00096	18.7	0.4	2.4	2	1	1	3	3	3	1	Protein	of	unknown	function	(DUF357)
Phasin_2	PF09361.5	gi|479325061|ref|YP_007865114.1|	-	0.004	17.1	1.2	0.0083	16.1	0.5	1.8	2	1	0	2	2	2	1	Phasin	protein
HEPN	PF05168.9	gi|479325061|ref|YP_007865114.1|	-	0.073	12.9	4.0	0.21	11.4	1.3	2.5	3	0	0	3	3	3	0	HEPN	domain
PqqD	PF05402.7	gi|479325061|ref|YP_007865114.1|	-	0.19	11.7	2.7	0.24	11.4	0.1	2.5	4	0	0	4	4	4	0	Coenzyme	PQQ	synthesis	protein	D	(PqqD)
PhoU	PF01895.14	gi|479325061|ref|YP_007865114.1|	-	1.7	9.1	5.3	19	5.8	1.0	3.0	2	1	1	3	3	3	0	PhoU	domain
Polysacc_synt_C	PF14667.1	gi|479325062|ref|YP_007865115.1|	-	0.096	12.4	0.8	0.1	12.4	0.6	1.0	1	0	0	1	1	1	0	Polysaccharide	biosynthesis	C-terminal	domain
Exonuc_VII_S	PF02609.11	gi|479325063|ref|YP_007865116.1|	-	0.098	12.4	2.1	0.1	12.4	0.1	1.9	2	1	0	2	2	2	0	Exonuclease	VII	small	subunit
DNA_pol_B	PF00136.16	gi|479325064|ref|YP_007865117.1|	-	1.2e-14	53.9	2.5	2.5e-13	49.6	1.8	2.5	1	1	0	1	1	1	1	DNA	polymerase	family	B
RsmJ	PF04378.8	gi|479325065|ref|YP_007865118.1|	-	0.1	11.5	0.0	0.15	11.0	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	RNA	small	subunit	methyltransferase	D,	RsmJ
OrfB_Zn_ribbon	PF07282.6	gi|479327029|ref|YP_007865119.1|	-	3.9e-21	74.4	2.4	8.3e-21	73.4	0.1	2.5	3	0	0	3	3	3	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|479327029|ref|YP_007865119.1|	-	7.7e-09	35.2	1.3	1.1e-08	34.8	0.3	1.6	2	0	0	2	2	2	1	Probable	transposase
zf-RING_4	PF14570.1	gi|479327029|ref|YP_007865119.1|	-	0.091	12.3	3.1	0.072	12.6	1.0	1.6	2	0	0	2	2	2	0	RING/Ubox	like	zinc-binding	domain
BAR_2	PF10455.4	gi|479325067|ref|YP_007865121.1|	-	0.0098	14.8	0.0	0.01	14.8	0.0	1.0	1	0	0	1	1	1	1	Bin/amphiphysin/Rvs	domain	for	vesicular	trafficking
ResIII	PF04851.10	gi|479325069|ref|YP_007865123.1|	-	1.8e-16	60.4	0.0	6.2e-16	58.7	0.0	2.0	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.26	gi|479325069|ref|YP_007865123.1|	-	6.4e-16	57.9	0.0	1.9e-15	56.4	0.0	1.8	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
DEAD	PF00270.24	gi|479325069|ref|YP_007865123.1|	-	8.2e-11	41.6	0.0	1.7e-09	37.4	0.0	2.4	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
MerR	PF00376.18	gi|479325069|ref|YP_007865123.1|	-	0.0076	15.7	0.2	0.031	13.8	0.0	2.1	2	0	0	2	2	2	1	MerR	family	regulatory	protein
DUF2075	PF09848.4	gi|479325069|ref|YP_007865123.1|	-	0.051	12.5	0.0	0.21	10.5	0.0	1.9	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
Helicase_C_2	PF13307.1	gi|479325069|ref|YP_007865123.1|	-	0.061	13.2	0.1	0.45	10.4	0.0	2.4	1	1	1	2	2	2	0	Helicase	C-terminal	domain
EamA	PF00892.15	gi|479325070|ref|YP_007865124.1|	-	2.5e-20	72.8	44.5	2.8e-11	43.5	14.0	2.4	2	1	0	2	2	2	2	EamA-like	transporter	family
UPF0060	PF02694.10	gi|479325070|ref|YP_007865124.1|	-	0.0054	16.7	3.6	0.0054	16.7	2.5	2.3	2	0	0	2	2	2	1	Uncharacterised	BCR,	YnfA/UPF0060	family
Arch_ATPase	PF01637.13	gi|479325071|ref|YP_007865125.1|	-	0.0085	15.8	0.2	0.0085	15.8	0.1	1.1	1	0	0	1	1	1	1	Archaeal	ATPase
AAA_14	PF13173.1	gi|479325071|ref|YP_007865125.1|	-	0.018	14.9	0.0	0.021	14.7	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
DUF2249	PF10006.4	gi|479325072|ref|YP_007865126.1|	-	1e-16	60.2	0.3	6.2e-16	57.7	0.1	2.1	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2249)
Cupin_2	PF07883.6	gi|479325072|ref|YP_007865126.1|	-	7.6e-12	44.5	0.3	2.1e-11	43.1	0.0	1.8	2	0	0	2	2	2	1	Cupin	domain
Cupin_1	PF00190.17	gi|479325072|ref|YP_007865126.1|	-	1.8e-06	27.4	0.0	2.6e-06	26.9	0.0	1.3	1	0	0	1	1	1	1	Cupin
Cupin_3	PF05899.7	gi|479325072|ref|YP_007865126.1|	-	1.3e-05	24.5	0.0	3.1e-05	23.2	0.0	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF861)
AraC_binding	PF02311.14	gi|479325072|ref|YP_007865126.1|	-	1.5e-05	24.6	0.0	2.7e-05	23.8	0.0	1.4	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
CENP-C_C	PF11699.3	gi|479325072|ref|YP_007865126.1|	-	1.6e-05	24.8	0.1	2.7e-05	24.0	0.0	1.4	1	0	0	1	1	1	1	Mif2/CENP-C	like
Auxin_BP	PF02041.11	gi|479325072|ref|YP_007865126.1|	-	0.0048	16.3	0.0	0.0074	15.7	0.0	1.3	1	0	0	1	1	1	1	Auxin	binding	protein
MannoseP_isomer	PF01050.13	gi|479325072|ref|YP_007865126.1|	-	0.013	15.1	0.0	0.018	14.6	0.0	1.3	1	0	0	1	1	1	0	Mannose-6-phosphate	isomerase
cNMP_binding	PF00027.24	gi|479325072|ref|YP_007865126.1|	-	0.042	13.6	0.3	6.3	6.6	0.0	2.4	2	0	0	2	2	2	0	Cyclic	nucleotide-binding	domain
Pirin_C	PF05726.8	gi|479325072|ref|YP_007865126.1|	-	0.069	13.2	0.0	0.45	10.6	0.0	2.0	2	0	0	2	2	2	0	Pirin	C-terminal	cupin	domain
DUF2249	PF10006.4	gi|479325073|ref|YP_007865127.1|	-	0.0054	16.2	0.0	0.0061	16.1	0.0	1.1	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2249)
SH3_1	PF00018.23	gi|479325073|ref|YP_007865127.1|	-	0.018	14.3	0.4	3.6	7.0	0.0	2.1	2	0	0	2	2	2	0	SH3	domain
DUF4064	PF13273.1	gi|479325074|ref|YP_007865128.1|	-	1.7	8.8	27.1	0.72	9.9	10.7	2.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4064)
Phage_holin_5	PF06946.6	gi|479325074|ref|YP_007865128.1|	-	3	8.0	5.8	4	7.6	4.0	1.2	1	0	0	1	1	1	0	Phage	holin
Copper-bind	PF00127.15	gi|479325075|ref|YP_007865129.1|	-	5.2e-07	29.8	0.0	1.5e-06	28.3	0.0	1.8	1	1	0	1	1	1	1	Copper	binding	proteins,	plastocyanin/azurin	family
SoxE	PF06525.6	gi|479325075|ref|YP_007865129.1|	-	0.019	14.2	0.7	0.019	14.2	0.5	2.6	2	2	0	2	2	2	0	Sulfocyanin	(SoxE)
Cu-oxidase_2	PF07731.9	gi|479325075|ref|YP_007865129.1|	-	0.071	12.6	0.0	0.45	10.0	0.0	2.0	2	0	0	2	2	2	0	Multicopper	oxidase
GRP	PF07172.6	gi|479325075|ref|YP_007865129.1|	-	0.072	13.5	16.3	0.21	12.0	11.4	1.6	1	1	0	1	1	1	0	Glycine	rich	protein	family
Hemerythrin	PF01814.18	gi|479325076|ref|YP_007865130.1|	-	0.00016	21.8	0.0	0.00018	21.6	0.0	1.1	1	0	0	1	1	1	1	Hemerythrin	HHE	cation	binding	domain
PrgU	PF09627.5	gi|479325076|ref|YP_007865130.1|	-	0.059	12.9	0.3	0.065	12.8	0.2	1.1	1	0	0	1	1	1	0	PrgU-like	protein
Gag_p15	PF08723.5	gi|479325077|ref|YP_007865131.1|	-	0.1	12.5	0.1	0.13	12.2	0.0	1.2	1	0	0	1	1	1	0	Gag	protein	p15
HTH_10	PF04967.7	gi|479325078|ref|YP_007865132.1|	-	2.4e-24	84.6	0.1	3.9e-24	83.9	0.1	1.3	1	0	0	1	1	1	1	HTH	DNA	binding	domain
Sigma70_r4	PF04545.11	gi|479325078|ref|YP_007865132.1|	-	4.4e-08	32.2	0.1	8e-08	31.4	0.1	1.4	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_24	PF13412.1	gi|479325078|ref|YP_007865132.1|	-	0.00026	20.3	0.1	0.00056	19.2	0.0	1.7	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_27	PF13463.1	gi|479325078|ref|YP_007865132.1|	-	0.0039	17.4	0.0	0.0069	16.6	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_Tnp_ISL3	PF13542.1	gi|479325078|ref|YP_007865132.1|	-	0.007	15.5	0.0	0.013	14.7	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_26	PF13443.1	gi|479325078|ref|YP_007865132.1|	-	0.0078	16.3	0.2	0.034	14.3	0.0	2.1	2	1	1	3	3	2	1	Cro/C1-type	HTH	DNA-binding	domain
HTH_23	PF13384.1	gi|479325078|ref|YP_007865132.1|	-	0.0087	15.6	0.0	0.019	14.5	0.0	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
MS_channel	PF00924.13	gi|479325078|ref|YP_007865132.1|	-	0.019	14.2	0.1	0.12	11.6	0.1	2.0	1	1	0	1	1	1	0	Mechanosensitive	ion	channel
Sigma70_r3	PF04539.11	gi|479325078|ref|YP_007865132.1|	-	0.021	14.6	0.0	0.046	13.5	0.0	1.5	1	0	0	1	1	1	0	Sigma-70	region	3
GerE	PF00196.14	gi|479325078|ref|YP_007865132.1|	-	0.022	14.0	0.1	4.6	6.6	0.0	2.5	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
HTH_AsnC-type	PF13404.1	gi|479325078|ref|YP_007865132.1|	-	0.026	14.0	0.0	0.053	13.0	0.0	1.5	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
ENT	PF03735.9	gi|479325078|ref|YP_007865132.1|	-	0.041	13.6	0.1	0.29	10.8	0.0	2.3	2	0	0	2	2	2	0	ENT	domain
HTH_IclR	PF09339.5	gi|479325078|ref|YP_007865132.1|	-	0.054	13.0	0.0	0.093	12.3	0.0	1.4	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
Mga	PF05043.8	gi|479325078|ref|YP_007865132.1|	-	0.055	13.7	0.1	0.58	10.4	0.1	2.4	1	1	0	1	1	1	0	Mga	helix-turn-helix	domain
MarR_2	PF12802.2	gi|479325078|ref|YP_007865132.1|	-	0.057	13.0	0.0	0.097	12.3	0.0	1.4	1	0	0	1	1	1	0	MarR	family
HTH_37	PF13744.1	gi|479325078|ref|YP_007865132.1|	-	0.058	13.2	0.0	0.13	12.0	0.0	1.6	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|479325078|ref|YP_007865132.1|	-	0.068	12.8	0.0	0.23	11.1	0.0	1.9	1	0	0	1	1	1	0	HTH	domain
HTH_28	PF13518.1	gi|479325078|ref|YP_007865132.1|	-	0.086	12.8	0.0	0.22	11.5	0.0	1.6	1	1	0	1	1	1	0	Helix-turn-helix	domain
FeoC	PF09012.5	gi|479325078|ref|YP_007865132.1|	-	0.095	12.4	0.0	0.24	11.1	0.0	1.7	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
HTH_Crp_2	PF13545.1	gi|479325078|ref|YP_007865132.1|	-	0.11	12.2	0.1	0.95	9.3	0.0	2.1	2	0	0	2	2	2	0	Crp-like	helix-turn-helix	domain
DUF1647	PF07801.6	gi|479325078|ref|YP_007865132.1|	-	0.14	11.6	1.8	0.28	10.6	1.3	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1647)
DUF488	PF04343.8	gi|479325079|ref|YP_007865133.1|	-	1.8e-26	92.8	0.0	2.1e-26	92.7	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF488
zf-C2H2	PF00096.21	gi|479325080|ref|YP_007865134.1|	-	1.1e-06	28.6	5.4	0.00089	19.4	0.5	2.2	2	0	0	2	2	2	2	Zinc	finger,	C2H2	type
zf-C2H2_6	PF13912.1	gi|479325080|ref|YP_007865134.1|	-	5.6e-05	22.9	4.4	0.00048	19.9	0.3	2.2	2	0	0	2	2	2	1	C2H2-type	zinc	finger
zf-Di19	PF05605.7	gi|479325080|ref|YP_007865134.1|	-	0.00046	20.2	3.3	0.0014	18.7	2.3	1.7	1	1	0	1	1	1	1	Drought	induced	19	protein	(Di19),	zinc-binding
zf-C2H2_4	PF13894.1	gi|479325080|ref|YP_007865134.1|	-	0.0012	19.0	4.0	0.21	12.0	0.3	2.4	2	0	0	2	2	2	2	C2H2-type	zinc	finger
Rubredoxin	PF00301.15	gi|479325080|ref|YP_007865134.1|	-	0.0034	17.2	0.3	0.0048	16.7	0.2	1.2	1	0	0	1	1	1	1	Rubredoxin
zf-H2C2_2	PF13465.1	gi|479325080|ref|YP_007865134.1|	-	0.0063	16.7	6.9	1.3	9.4	0.0	2.9	3	0	0	3	3	3	2	Zinc-finger	double	domain
zf-C2HC_2	PF13913.1	gi|479325080|ref|YP_007865134.1|	-	0.0082	15.7	2.4	0.033	13.8	0.0	2.2	2	0	0	2	2	2	1	zinc-finger	of	a	C2HC-type
zinc_ribbon_5	PF13719.1	gi|479325080|ref|YP_007865134.1|	-	0.014	14.9	1.3	0.36	10.4	0.2	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|479325080|ref|YP_007865134.1|	-	0.017	14.7	1.4	0.42	10.3	0.2	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-C2H2_2	PF12756.2	gi|479325080|ref|YP_007865134.1|	-	0.019	15.0	3.9	0.78	9.8	0.7	2.1	1	1	1	2	2	2	0	C2H2	type	zinc-finger	(2	copies)
zf-C3HC4_3	PF13920.1	gi|479325080|ref|YP_007865134.1|	-	0.024	14.3	0.2	1.8	8.2	0.0	2.1	2	0	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
zf-DNA_Pol	PF08996.5	gi|479325080|ref|YP_007865134.1|	-	0.025	13.9	0.4	0.027	13.8	0.3	1.1	1	0	0	1	1	1	0	DNA	Polymerase	alpha	zinc	finger
C1_2	PF03107.11	gi|479325080|ref|YP_007865134.1|	-	0.036	14.1	2.2	0.58	10.3	0.2	2.1	2	0	0	2	2	2	0	C1	domain
HypA	PF01155.14	gi|479325080|ref|YP_007865134.1|	-	0.039	13.6	0.2	0.053	13.2	0.1	1.2	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
Prok-RING_1	PF14446.1	gi|479325080|ref|YP_007865134.1|	-	0.049	13.3	1.2	2.7	7.7	0.1	2.1	2	0	0	2	2	2	0	Prokaryotic	RING	finger	family	1
zf-met	PF12874.2	gi|479325080|ref|YP_007865134.1|	-	0.055	13.7	6.1	0.073	13.2	0.4	2.4	2	1	0	2	2	2	0	Zinc-finger	of	C2H2	type
Elf1	PF05129.8	gi|479325080|ref|YP_007865134.1|	-	0.056	13.1	2.0	1.5	8.5	0.1	2.1	1	1	1	2	2	2	0	Transcription	elongation	factor	Elf1	like
Zn-ribbon_8	PF09723.5	gi|479325080|ref|YP_007865134.1|	-	0.059	13.3	4.4	0.94	9.4	0.2	2.2	1	1	1	2	2	2	0	Zinc	ribbon	domain
zf-C2H2_jaz	PF12171.3	gi|479325080|ref|YP_007865134.1|	-	0.096	12.8	3.0	0.45	10.7	0.2	2.6	3	0	0	3	3	2	0	Zinc-finger	double-stranded	RNA-binding
zf-C3HC4_2	PF13923.1	gi|479325080|ref|YP_007865134.1|	-	0.1	12.6	0.4	3	7.9	0.0	2.2	2	0	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
zf-met2	PF12907.2	gi|479325080|ref|YP_007865134.1|	-	0.11	12.4	1.5	0.83	9.6	0.0	2.6	3	0	0	3	3	3	0	Zinc-binding
Zn_ribbon_recom	PF13408.1	gi|479325080|ref|YP_007865134.1|	-	0.11	12.7	0.5	0.15	12.3	0.3	1.2	1	0	0	1	1	1	0	Recombinase	zinc	beta	ribbon	domain
Endonuclease_7	PF02945.10	gi|479325080|ref|YP_007865134.1|	-	0.13	12.0	2.2	0.2	11.4	0.2	1.9	1	1	1	2	2	2	0	Recombination	endonuclease	VII
TF_Zn_Ribbon	PF08271.7	gi|479325080|ref|YP_007865134.1|	-	0.16	11.3	2.0	8.9	5.7	0.1	2.2	2	0	0	2	2	2	0	TFIIB	zinc-binding
LRR19-TM	PF15176.1	gi|479325080|ref|YP_007865134.1|	-	0.2	11.3	0.8	0.3	10.8	0.5	1.4	1	1	0	1	1	1	0	Leucine-rich	repeat	family	19	TM	domain
zf-RING_2	PF13639.1	gi|479325080|ref|YP_007865134.1|	-	0.2	11.4	1.4	8.2	6.3	1.2	2.1	1	1	1	2	2	2	0	Ring	finger	domain
Cytochrome_C7	PF14522.1	gi|479325080|ref|YP_007865134.1|	-	0.42	10.2	2.6	0.75	9.4	1.8	1.5	1	1	0	1	1	1	0	Cytochrome	c7
Rad50_zn_hook	PF04423.9	gi|479325080|ref|YP_007865134.1|	-	0.45	10.0	3.2	3.1	7.3	0.7	2.4	2	1	0	2	2	2	0	Rad50	zinc	hook	motif
zf-dskA_traR	PF01258.12	gi|479325080|ref|YP_007865134.1|	-	0.45	10.2	3.2	15	5.4	0.0	2.3	2	0	0	2	2	2	0	Prokaryotic	dksA/traR	C4-type	zinc	finger
DUF2225	PF09986.4	gi|479325080|ref|YP_007865134.1|	-	0.54	9.6	2.8	6.8	6.0	0.2	2.0	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2225)
C1_3	PF07649.7	gi|479325080|ref|YP_007865134.1|	-	0.64	10.1	4.6	1.4	9.0	0.2	2.1	2	0	0	2	2	2	0	C1-like	domain
ADK_lid	PF05191.9	gi|479325080|ref|YP_007865134.1|	-	0.65	9.7	2.9	2.2	8.0	2.0	1.9	1	1	0	1	1	1	0	Adenylate	kinase,	active	site	lid
zf-RING_5	PF14634.1	gi|479325080|ref|YP_007865134.1|	-	0.91	9.2	4.1	10	5.9	0.3	2.2	1	1	2	3	3	3	0	zinc-RING	finger	domain
zf-nanos	PF05741.8	gi|479325080|ref|YP_007865134.1|	-	1.1	9.2	3.7	21	5.1	2.6	2.2	1	1	0	1	1	1	0	Nanos	RNA	binding	domain
zf-trcl	PF13451.1	gi|479325080|ref|YP_007865134.1|	-	2.4	7.8	6.9	17	5.1	4.0	2.4	2	1	0	2	2	1	0	Probable	zinc-binding	domain
DUF59	PF01883.14	gi|479325081|ref|YP_007865135.1|	-	0.0012	18.7	0.0	0.0014	18.5	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF59
Antimicrobial19	PF08225.6	gi|479325081|ref|YP_007865135.1|	-	0.0073	15.6	0.3	0.012	14.9	0.2	1.3	1	0	0	1	1	1	1	Pseudin	antimicrobial	peptide
YqhG	PF11079.3	gi|479325081|ref|YP_007865135.1|	-	0.067	11.9	0.1	0.082	11.7	0.1	1.1	1	0	0	1	1	1	0	Bacterial	protein	YqhG	of	unknown	function
Usp	PF00582.21	gi|479325082|ref|YP_007865136.1|	-	4.3e-35	120.9	0.7	5e-35	120.7	0.5	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
Peptidase_M19	PF01244.16	gi|479325083|ref|YP_007865137.1|	-	3.8e-71	239.6	0.0	4.3e-71	239.4	0.0	1.0	1	0	0	1	1	1	1	Membrane	dipeptidase	(Peptidase	family	M19)
MFS_1	PF07690.11	gi|479325084|ref|YP_007865138.1|	-	3.8e-27	94.9	62.5	2.1e-23	82.6	28.5	2.3	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|479325084|ref|YP_007865138.1|	-	0.19	9.8	15.6	0.027	12.5	5.6	2.0	2	0	0	2	2	2	0	Transmembrane	secretion	effector
KaiC	PF06745.8	gi|479325085|ref|YP_007865139.1|	-	7.3e-88	293.5	0.1	1.1e-87	292.8	0.1	1.3	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.1	gi|479325085|ref|YP_007865139.1|	-	2.3e-10	40.1	0.0	4.1e-10	39.3	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
DUF2075	PF09848.4	gi|479325085|ref|YP_007865139.1|	-	0.00018	20.6	5.0	0.0015	17.5	0.3	2.4	2	1	0	3	3	3	2	Uncharacterized	conserved	protein	(DUF2075)
Arch_ATPase	PF01637.13	gi|479325085|ref|YP_007865139.1|	-	0.0025	17.5	0.1	0.0048	16.6	0.0	1.4	2	0	0	2	2	2	1	Archaeal	ATPase
GvpD	PF07088.6	gi|479325085|ref|YP_007865139.1|	-	0.0062	14.9	0.0	0.0092	14.3	0.0	1.2	1	0	0	1	1	1	1	GvpD	gas	vesicle	protein
DUF1833	PF08875.6	gi|479325085|ref|YP_007865139.1|	-	0.0081	15.3	0.2	0.091	11.9	0.1	2.0	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1833)
AAA_14	PF13173.1	gi|479325085|ref|YP_007865139.1|	-	0.0084	16.0	0.0	0.017	15.0	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|479325085|ref|YP_007865139.1|	-	0.013	15.6	0.6	0.074	13.1	0.4	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_19	PF13245.1	gi|479325085|ref|YP_007865139.1|	-	0.016	14.9	0.3	0.049	13.4	0.2	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
T2SE	PF00437.15	gi|479325085|ref|YP_007865139.1|	-	0.039	12.8	0.0	0.075	11.9	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
Drf_FH3	PF06367.11	gi|479325085|ref|YP_007865139.1|	-	0.065	12.6	0.0	0.13	11.6	0.0	1.4	1	0	0	1	1	1	0	Diaphanous	FH3	Domain
PAXNEB	PF05625.6	gi|479325085|ref|YP_007865139.1|	-	0.1	11.4	0.4	2	7.1	0.0	2.3	3	0	0	3	3	3	0	PAXNEB	protein
AAA_18	PF13238.1	gi|479325085|ref|YP_007865139.1|	-	0.13	12.5	2.4	0.24	11.6	0.1	2.4	2	1	0	2	2	2	0	AAA	domain
AAA_16	PF13191.1	gi|479325085|ref|YP_007865139.1|	-	0.18	11.7	0.2	0.72	9.8	0.2	1.7	1	1	0	2	2	2	0	AAA	ATPase	domain
BacA	PF02673.13	gi|479325086|ref|YP_007865140.1|	-	8.9e-22	77.5	3.8	1.1e-21	77.2	2.6	1.0	1	0	0	1	1	1	1	Bacitracin	resistance	protein	BacA
Polysacc_synt_C	PF14667.1	gi|479325086|ref|YP_007865140.1|	-	0.034	13.9	6.6	0.043	13.6	4.6	1.1	1	0	0	1	1	1	0	Polysaccharide	biosynthesis	C-terminal	domain
Romo1	PF10247.4	gi|479325086|ref|YP_007865140.1|	-	0.058	13.6	1.0	0.14	12.3	0.7	1.7	1	0	0	1	1	1	0	Reactive	mitochondrial	oxygen	species	modulator	1
DUF2434	PF10361.4	gi|479325086|ref|YP_007865140.1|	-	0.17	10.9	2.8	0.11	11.5	0.3	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2434)
7TM_GPCR_Srh	PF10318.4	gi|479325086|ref|YP_007865140.1|	-	0.68	8.6	7.4	2.3	6.9	5.2	1.8	1	1	0	1	1	1	0	Serpentine	type	7TM	GPCR	chemoreceptor	Srh
DUF485	PF04341.7	gi|479325086|ref|YP_007865140.1|	-	1.4	8.6	6.7	0.17	11.6	0.4	2.4	1	1	1	3	3	3	0	Protein	of	unknown	function,	DUF485
BacA	PF02673.13	gi|479325087|ref|YP_007865141.1|	-	3.3e-30	105.1	9.9	3.9e-30	104.9	6.9	1.1	1	0	0	1	1	1	1	Bacitracin	resistance	protein	BacA
DUF4396	PF14342.1	gi|479325087|ref|YP_007865141.1|	-	0.19	11.8	4.6	0.082	13.0	0.6	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4396)
ABC2_membrane_4	PF12730.2	gi|479325087|ref|YP_007865141.1|	-	0.57	9.2	16.9	0.97	8.5	11.7	1.4	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
DUF3185	PF11381.3	gi|479325087|ref|YP_007865141.1|	-	0.73	9.6	11.2	0.97	9.2	0.3	3.3	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF3185)
YfhO	PF09586.5	gi|479325087|ref|YP_007865141.1|	-	1.2	7.1	5.6	1.4	6.8	3.9	1.0	1	0	0	1	1	1	0	Bacterial	membrane	protein	YfhO
DUF1146	PF06612.6	gi|479325087|ref|YP_007865141.1|	-	1.3	8.9	10.0	0.46	10.4	2.7	2.5	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1146)
Peptidase_M48	PF01435.13	gi|479325088|ref|YP_007865142.1|	-	3.9e-31	108.3	0.0	7.7e-31	107.4	0.0	1.6	1	1	0	1	1	1	1	Peptidase	family	M48
Peptidase_M56	PF05569.6	gi|479325088|ref|YP_007865142.1|	-	0.015	14.3	0.7	0.23	10.3	0.0	2.2	2	0	0	2	2	2	0	BlaR1	peptidase	M56
GATase	PF00117.23	gi|479325089|ref|YP_007865143.1|	-	1.5e-19	70.2	0.0	1.8e-19	69.9	0.0	1.1	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|479325089|ref|YP_007865143.1|	-	2.9e-06	26.8	0.1	6.5e-06	25.7	0.0	1.7	3	0	0	3	3	3	1	Peptidase	C26
SNO	PF01174.14	gi|479325089|ref|YP_007865143.1|	-	0.022	14.3	0.1	0.042	13.4	0.0	1.5	1	0	0	1	1	1	0	SNO	glutamine	amidotransferase	family
GATase_3	PF07685.9	gi|479325089|ref|YP_007865143.1|	-	0.051	13.1	0.1	0.067	12.7	0.0	1.3	1	0	0	1	1	1	0	CobB/CobQ-like	glutamine	amidotransferase	domain
HTS	PF04204.11	gi|479325089|ref|YP_007865143.1|	-	0.056	12.1	0.0	0.08	11.6	0.0	1.3	1	0	0	1	1	1	0	Homoserine	O-succinyltransferase
PPK2	PF03976.9	gi|479325089|ref|YP_007865143.1|	-	0.061	12.5	0.2	0.12	11.6	0.1	1.5	2	0	0	2	2	2	0	Polyphosphate	kinase	2	(PPK2)
DoxA	PF07680.6	gi|479325090|ref|YP_007865144.1|	-	1.5e-50	170.2	0.1	1.8e-50	169.9	0.1	1.1	1	0	0	1	1	1	1	TQO	small	subunit	DoxA
DoxD	PF04173.8	gi|479325091|ref|YP_007865145.1|	-	1e-67	227.0	4.2	1.1e-67	226.8	2.9	1.0	1	0	0	1	1	1	1	TQO	small	subunit	DoxD
DoxX	PF07681.7	gi|479325091|ref|YP_007865145.1|	-	0.00055	20.3	10.0	0.00055	20.3	6.9	2.1	2	1	0	2	2	2	1	DoxX
Amidohydro_1	PF01979.15	gi|479325092|ref|YP_007865146.1|	-	5.8e-40	137.9	0.0	6.8e-40	137.7	0.0	1.0	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|479325092|ref|YP_007865146.1|	-	1.3e-09	38.5	0.0	2.4e-05	24.5	0.0	2.3	1	1	0	2	2	2	2	Amidohydrolase
Amidohydro_5	PF13594.1	gi|479325092|ref|YP_007865146.1|	-	1.4e-07	31.2	0.0	2.8e-07	30.2	0.0	1.6	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|479325092|ref|YP_007865146.1|	-	0.00035	19.8	0.0	0.23	10.6	0.0	2.7	2	1	0	2	2	2	2	Amidohydrolase	family
FtsX	PF02687.16	gi|479325093|ref|YP_007865147.1|	-	0.003	17.3	0.4	0.0031	17.2	0.3	1.1	1	0	0	1	1	1	1	FtsX-like	permease	family
Wzy_C	PF04932.10	gi|479325093|ref|YP_007865147.1|	-	0.082	12.7	0.5	0.093	12.5	0.4	1.1	1	0	0	1	1	1	0	O-Antigen	ligase
FtsX	PF02687.16	gi|479325095|ref|YP_007865149.1|	-	8.9e-05	22.2	1.1	8.9e-05	22.2	0.8	2.7	1	1	2	3	3	3	1	FtsX-like	permease	family
MacB_PCD	PF12704.2	gi|479325095|ref|YP_007865149.1|	-	0.00067	19.3	0.1	0.00067	19.3	0.1	2.0	1	1	0	2	2	2	1	MacB-like	periplasmic	core	domain
SieB	PF14163.1	gi|479325095|ref|YP_007865149.1|	-	0.053	13.0	1.8	0.79	9.2	0.0	2.2	2	0	0	2	2	2	0	Superinfection	exclusion	protein	B
MacB_PCD	PF12704.2	gi|479325096|ref|YP_007865150.1|	-	2.7e-09	36.9	0.6	3.3e-09	36.6	0.4	1.0	1	0	0	1	1	1	1	MacB-like	periplasmic	core	domain
DUF2127	PF09900.4	gi|479325096|ref|YP_007865150.1|	-	0.015	15.3	0.0	0.027	14.4	0.0	1.4	1	1	1	2	2	2	0	Predicted	membrane	protein	(DUF2127)
Peptidase_MA_2	PF13485.1	gi|479325097|ref|YP_007865151.1|	-	6e-06	26.3	0.0	1.1e-05	25.4	0.0	1.4	1	1	0	1	1	1	1	Peptidase	MA	superfamily
RecO_N_2	PF13114.1	gi|479325097|ref|YP_007865151.1|	-	0.05	13.3	0.0	0.092	12.4	0.0	1.3	1	0	0	1	1	1	0	RecO	N	terminal
GHL1-3	PF11308.3	gi|479325097|ref|YP_007865151.1|	-	0.056	12.7	0.0	0.076	12.3	0.0	1.2	1	0	0	1	1	1	0	Glycosyl	hydrolases	related	to	GH101	family,	GHL1-GHL3
Ubie_methyltran	PF01209.13	gi|479325098|ref|YP_007865152.1|	-	2.3e-21	75.9	0.9	4.5e-21	75.0	0.6	1.3	1	1	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_11	PF08241.7	gi|479325098|ref|YP_007865152.1|	-	2.5e-09	37.4	0.0	4.3e-09	36.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|479325098|ref|YP_007865152.1|	-	2.9e-07	30.2	0.1	5.7e-07	29.2	0.1	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|479325098|ref|YP_007865152.1|	-	3e-06	27.5	0.0	1.2e-05	25.5	0.0	2.0	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|479325098|ref|YP_007865152.1|	-	5.9e-06	26.6	0.0	1.3e-05	25.5	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
MetW	PF07021.7	gi|479325098|ref|YP_007865152.1|	-	9.4e-06	25.1	0.0	1.6e-05	24.3	0.0	1.4	1	1	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
Methyltransf_23	PF13489.1	gi|479325098|ref|YP_007865152.1|	-	0.0001	22.0	0.0	0.00014	21.5	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
DUF1423	PF07227.6	gi|479325098|ref|YP_007865152.1|	-	0.023	13.3	0.0	0.062	11.9	0.0	1.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1423)
Methyltransf_18	PF12847.2	gi|479325098|ref|YP_007865152.1|	-	0.037	14.6	0.0	0.13	12.7	0.0	1.9	1	1	0	1	1	1	0	Methyltransferase	domain
ATG16	PF08614.6	gi|479325099|ref|YP_007865153.1|	-	2.3e-05	24.3	5.0	2.3e-05	24.3	3.5	1.4	2	0	0	2	2	1	1	Autophagy	protein	16	(ATG16)
WEMBL	PF05701.6	gi|479325099|ref|YP_007865153.1|	-	5.3e-05	21.8	10.3	5.3e-05	21.8	7.1	1.7	2	0	0	2	2	2	1	Weak	chloroplast	movement	under	blue	light
AAA_13	PF13166.1	gi|479325099|ref|YP_007865153.1|	-	0.00039	19.0	15.1	0.00061	18.3	10.5	1.2	1	0	0	1	1	1	1	AAA	domain
DUF1664	PF07889.7	gi|479325099|ref|YP_007865153.1|	-	0.00039	20.1	17.1	0.083	12.6	0.4	4.1	2	1	2	4	4	4	2	Protein	of	unknown	function	(DUF1664)
DUF948	PF06103.6	gi|479325099|ref|YP_007865153.1|	-	0.00052	19.8	2.0	0.00052	19.8	1.4	2.8	2	1	1	3	3	2	1	Bacterial	protein	of	unknown	function	(DUF948)
Orbi_VP5	PF00901.12	gi|479325099|ref|YP_007865153.1|	-	0.00055	18.2	10.2	0.0008	17.7	7.0	1.2	1	0	0	1	1	1	1	Orbivirus	outer	capsid	protein	VP5
DUF4631	PF15450.1	gi|479325099|ref|YP_007865153.1|	-	0.0021	16.4	1.0	0.0021	16.4	0.7	2.1	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4631)
DUF2353	PF09789.4	gi|479325099|ref|YP_007865153.1|	-	0.0026	17.0	9.9	0.0026	17.0	6.8	2.1	1	1	0	2	2	2	1	Uncharacterized	coiled-coil	protein	(DUF2353)
Baculo_PEP_C	PF04513.7	gi|479325099|ref|YP_007865153.1|	-	0.0028	17.5	4.1	0.015	15.1	1.7	2.9	2	1	0	2	2	1	1	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Spc7	PF08317.6	gi|479325099|ref|YP_007865153.1|	-	0.0029	16.3	14.4	0.0029	16.3	10.0	1.9	2	1	0	2	2	2	1	Spc7	kinetochore	protein
DUF904	PF06005.7	gi|479325099|ref|YP_007865153.1|	-	0.0031	17.7	2.0	0.0031	17.7	1.4	3.6	2	1	1	3	3	3	1	Protein	of	unknown	function	(DUF904)
HAUS5	PF14817.1	gi|479325099|ref|YP_007865153.1|	-	0.0037	15.8	2.7	0.0051	15.4	1.8	1.1	1	0	0	1	1	1	1	HAUS	augmin-like	complex	subunit	5
Syntaxin-6_N	PF09177.6	gi|479325099|ref|YP_007865153.1|	-	0.009	16.3	7.9	1.3	9.4	0.2	3.3	2	1	2	4	4	2	2	Syntaxin	6,	N-terminal
Reo_sigmaC	PF04582.7	gi|479325099|ref|YP_007865153.1|	-	0.011	14.9	0.1	0.016	14.3	0.1	1.3	1	0	0	1	1	1	0	Reovirus	sigma	C	capsid	protein
DUF2968	PF11180.3	gi|479325099|ref|YP_007865153.1|	-	0.011	15.0	1.0	0.017	14.5	0.7	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2968)
Laminin_II	PF06009.7	gi|479325099|ref|YP_007865153.1|	-	0.012	15.3	1.1	0.012	15.3	0.8	2.7	2	1	1	3	3	2	0	Laminin	Domain	II
DivIC	PF04977.10	gi|479325099|ref|YP_007865153.1|	-	0.013	14.9	0.8	0.013	14.9	0.6	4.7	3	1	2	5	5	5	0	Septum	formation	initiator
DUF3450	PF11932.3	gi|479325099|ref|YP_007865153.1|	-	0.023	13.9	2.6	0.051	12.8	1.5	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3450)
bZIP_1	PF00170.16	gi|479325099|ref|YP_007865153.1|	-	0.023	14.6	0.6	0.023	14.6	0.4	3.8	3	1	1	4	4	4	0	bZIP	transcription	factor
Rootletin	PF15035.1	gi|479325099|ref|YP_007865153.1|	-	0.027	14.4	8.5	0.046	13.6	5.9	1.4	1	0	0	1	1	1	0	Ciliary	rootlet	component,	centrosome	cohesion
FAINT	PF04385.10	gi|479325099|ref|YP_007865153.1|	-	0.029	14.2	1.1	7.8	6.4	0.2	2.8	2	1	0	2	2	2	0	Domain	of	unknown	function,	DUF529
Effector_1	PF04518.7	gi|479325099|ref|YP_007865153.1|	-	0.029	13.3	2.6	0.04	12.8	1.8	1.3	1	0	0	1	1	1	0	Effector	from	type	III	secretion	system
Hemerythrin	PF01814.18	gi|479325099|ref|YP_007865153.1|	-	0.03	14.5	3.2	4.4	7.4	0.7	2.5	1	1	1	2	2	2	0	Hemerythrin	HHE	cation	binding	domain
DUF972	PF06156.8	gi|479325099|ref|YP_007865153.1|	-	0.033	14.5	1.8	0.033	14.5	1.2	3.1	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF972)
Filament	PF00038.16	gi|479325099|ref|YP_007865153.1|	-	0.034	13.6	12.1	0.074	12.5	8.4	1.6	1	1	0	1	1	1	0	Intermediate	filament	protein
IncA	PF04156.9	gi|479325099|ref|YP_007865153.1|	-	0.043	13.4	8.5	0.17	11.4	5.9	1.9	1	1	0	1	1	1	0	IncA	protein
Myosin_tail_1	PF01576.14	gi|479325099|ref|YP_007865153.1|	-	0.051	11.3	16.6	0.016	12.9	8.9	1.7	2	0	0	2	2	2	0	Myosin	tail
DUF4618	PF15397.1	gi|479325099|ref|YP_007865153.1|	-	0.078	12.3	15.7	0.18	11.0	10.9	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4618)
APG6	PF04111.7	gi|479325099|ref|YP_007865153.1|	-	0.082	11.9	10.4	0.084	11.9	6.3	1.6	1	1	0	1	1	1	0	Autophagy	protein	Apg6
Laminin_I	PF06008.9	gi|479325099|ref|YP_007865153.1|	-	0.09	12.0	11.4	0.03	13.6	3.5	2.3	2	1	1	3	3	2	0	Laminin	Domain	I
ADIP	PF11559.3	gi|479325099|ref|YP_007865153.1|	-	0.11	12.3	12.3	0.021	14.7	5.6	1.9	2	1	0	2	2	1	0	Afadin-	and	alpha	-actinin-Binding
Uds1	PF15456.1	gi|479325099|ref|YP_007865153.1|	-	0.16	11.9	8.3	1.2	9.1	0.0	3.3	1	1	2	3	3	3	0	Up-regulated	During	Septation
IL6	PF00489.12	gi|479325099|ref|YP_007865153.1|	-	0.18	11.3	1.9	0.94	9.0	1.1	2.2	1	1	1	2	2	2	0	Interleukin-6/G-CSF/MGF	family
Hemagglutinin	PF00509.13	gi|479325099|ref|YP_007865153.1|	-	0.22	9.6	11.1	0.59	8.2	0.7	2.3	1	1	1	2	2	2	0	Haemagglutinin
Ku_PK_bind	PF08785.6	gi|479325099|ref|YP_007865153.1|	-	0.24	11.2	6.2	0.33	10.8	0.0	3.1	2	1	1	3	3	3	0	Ku	C	terminal	domain	like
Lebercilin	PF15619.1	gi|479325099|ref|YP_007865153.1|	-	0.25	10.7	13.0	0.05	13.0	6.4	1.8	2	0	0	2	2	1	0	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
Rep_fac_C	PF08542.6	gi|479325099|ref|YP_007865153.1|	-	0.26	11.2	3.8	47	4.0	2.2	3.4	2	1	0	2	2	2	0	Replication	factor	C	C-terminal	domain
COG5	PF10392.4	gi|479325099|ref|YP_007865153.1|	-	0.28	11.1	6.9	0.73	9.8	0.7	2.5	1	1	2	3	3	3	0	Golgi	transport	complex	subunit	5
DUF615	PF04751.9	gi|479325099|ref|YP_007865153.1|	-	0.31	10.6	7.8	0.65	9.6	5.2	1.8	2	1	0	2	2	1	0	Protein	of	unknown	function	(DUF615)
Shugoshin_N	PF07558.6	gi|479325099|ref|YP_007865153.1|	-	0.31	10.7	3.9	1.4	8.6	0.3	2.8	2	0	0	2	2	2	0	Shugoshin	N-terminal	coiled-coil	region
DUF3573	PF12097.3	gi|479325099|ref|YP_007865153.1|	-	0.36	9.3	2.2	0.62	8.6	1.1	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3573)
Nup88	PF10168.4	gi|479325099|ref|YP_007865153.1|	-	0.37	8.5	13.4	0.52	8.0	9.3	1.1	1	0	0	1	1	1	0	Nuclear	pore	component
DUF2730	PF10805.3	gi|479325099|ref|YP_007865153.1|	-	0.48	10.1	9.3	5.1	6.8	2.6	3.2	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF2730)
TMF_DNA_bd	PF12329.3	gi|479325099|ref|YP_007865153.1|	-	0.54	10.1	19.5	0.041	13.6	1.1	3.5	2	1	1	3	3	3	0	TATA	element	modulatory	factor	1	DNA	binding
Fib_alpha	PF08702.5	gi|479325099|ref|YP_007865153.1|	-	0.66	10.1	15.6	0.87	9.7	4.4	2.7	1	1	1	2	2	2	0	Fibrinogen	alpha/beta	chain	family
MCPsignal	PF00015.16	gi|479325099|ref|YP_007865153.1|	-	0.79	9.2	4.9	0.43	10.1	1.5	2.0	2	1	0	2	2	1	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
Atg14	PF10186.4	gi|479325099|ref|YP_007865153.1|	-	0.83	8.5	10.3	1.7	7.5	7.1	1.7	1	1	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
Med11	PF10280.4	gi|479325099|ref|YP_007865153.1|	-	0.92	9.5	6.7	0.42	10.6	3.1	1.7	2	0	0	2	2	1	0	Mediator	complex	protein
Hormone_1	PF00103.15	gi|479325099|ref|YP_007865153.1|	-	0.99	8.6	6.5	1.3	8.3	1.5	2.3	1	1	1	2	2	2	0	Somatotropin	hormone	family
FlaC_arch	PF05377.6	gi|479325099|ref|YP_007865153.1|	-	1	9.3	18.0	0.18	11.7	0.9	4.4	3	2	1	4	4	4	0	Flagella	accessory	protein	C	(FlaC)
CENP-F_leu_zip	PF10473.4	gi|479325099|ref|YP_007865153.1|	-	1.5	8.7	16.2	0.24	11.2	7.1	2.5	2	1	1	3	3	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
COMP	PF11598.3	gi|479325099|ref|YP_007865153.1|	-	1.5	8.9	11.9	17	5.5	0.7	3.8	2	1	1	3	3	2	0	Cartilage	oligomeric	matrix	protein
DUF4559	PF15112.1	gi|479325099|ref|YP_007865153.1|	-	1.5	7.9	17.0	5.8	5.9	9.8	2.1	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4559)
TPR_MLP1_2	PF07926.7	gi|479325099|ref|YP_007865153.1|	-	1.6	8.5	14.7	9.7	5.9	1.3	3.1	2	1	1	3	3	2	0	TPR/MLP1/MLP2-like	protein
GrpE	PF01025.14	gi|479325099|ref|YP_007865153.1|	-	2.5	7.6	13.4	2.5	7.6	1.5	2.6	1	1	1	2	2	2	0	GrpE
Bap31	PF05529.7	gi|479325099|ref|YP_007865153.1|	-	2.9	7.3	9.2	39	3.6	6.4	2.3	1	1	0	1	1	1	0	B-cell	receptor-associated	protein	31-like
zf-C4H2	PF10146.4	gi|479325099|ref|YP_007865153.1|	-	2.9	7.8	17.9	1	9.3	10.0	1.8	1	1	1	2	2	2	0	Zinc	finger-containing	protein
TMPIT	PF07851.8	gi|479325099|ref|YP_007865153.1|	-	3.5	6.6	8.8	0.26	10.2	0.7	1.9	1	1	1	2	2	2	0	TMPIT-like	protein
COG2	PF06148.6	gi|479325099|ref|YP_007865153.1|	-	4.7	7.0	11.2	13	5.6	5.1	3.0	2	1	0	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
TSC22	PF01166.13	gi|479325099|ref|YP_007865153.1|	-	4.7	7.2	8.0	1.3	9.0	0.2	3.2	2	1	1	3	3	3	0	TSC-22/dip/bun	family
Kinetocho_Slk19	PF12709.2	gi|479325099|ref|YP_007865153.1|	-	5.4	7.1	12.5	3.7	7.7	0.7	3.4	2	1	1	3	3	2	0	Central	kinetochore-associated
V_ATPase_I	PF01496.14	gi|479325099|ref|YP_007865153.1|	-	6.3	4.5	12.7	8.4	4.1	8.2	1.5	1	1	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
ORF6C	PF10552.4	gi|479325099|ref|YP_007865153.1|	-	7.2	6.3	16.7	0.54	10.0	0.6	4.0	2	1	3	5	5	5	0	ORF6C	domain
Orthopox_A5L	PF06193.6	gi|479325099|ref|YP_007865153.1|	-	9.7	6.0	13.9	20	5.0	8.2	2.5	1	1	1	2	2	2	0	Orthopoxvirus	A5L	protein-like
AA_permease	PF00324.16	gi|479325100|ref|YP_007865154.1|	-	0.00027	19.4	51.9	0.0018	16.7	35.7	2.3	1	1	0	1	1	1	1	Amino	acid	permease
AA_permease_2	PF13520.1	gi|479325100|ref|YP_007865154.1|	-	0.00047	18.8	46.5	0.00047	18.8	32.2	2.4	1	1	1	2	2	2	2	Amino	acid	permease
DUF981	PF06168.6	gi|479325101|ref|YP_007865155.1|	-	6.2e-61	205.5	15.3	6.9e-61	205.3	10.6	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF981)
Colicin_V	PF02674.11	gi|479325101|ref|YP_007865155.1|	-	0.00041	20.2	5.0	0.00041	20.2	3.5	2.7	2	1	0	2	2	2	1	Colicin	V	production	protein
AmiS_UreI	PF02293.10	gi|479325101|ref|YP_007865155.1|	-	0.38	10.3	9.8	0.93	9.1	6.8	1.8	1	1	0	1	1	1	0	AmiS/UreI	family	transporter
FixH	PF05751.6	gi|479325101|ref|YP_007865155.1|	-	2.8	7.7	6.2	1.1	9.0	2.1	1.9	2	0	0	2	2	2	0	FixH
ATP-grasp_5	PF13549.1	gi|479325102|ref|YP_007865156.1|	-	1.6e-47	161.6	0.4	2.9e-47	160.7	0.3	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
Succ_CoA_lig	PF13607.1	gi|479325102|ref|YP_007865156.1|	-	7.7e-47	158.3	0.0	2.3e-46	156.8	0.0	1.8	3	0	0	3	3	3	1	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding_2	PF13380.1	gi|479325102|ref|YP_007865156.1|	-	1.7e-22	79.7	0.4	1.7e-21	76.5	0.1	2.5	2	0	0	2	2	2	1	CoA	binding	domain
CoA_binding	PF02629.14	gi|479325102|ref|YP_007865156.1|	-	1.6e-15	57.3	0.2	6.1e-15	55.5	0.2	2.1	1	0	0	1	1	1	1	CoA	binding	domain
RimK	PF08443.6	gi|479325102|ref|YP_007865156.1|	-	2.8e-05	23.6	0.1	5.7e-05	22.6	0.1	1.5	1	0	0	1	1	1	1	RimK-like	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|479325102|ref|YP_007865156.1|	-	5.2e-05	23.0	0.0	9.8e-05	22.1	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_2	PF08442.5	gi|479325102|ref|YP_007865156.1|	-	0.0008	18.8	0.2	0.02	14.2	0.2	2.6	1	1	0	1	1	1	1	ATP-grasp	domain
GARS_A	PF01071.14	gi|479325102|ref|YP_007865156.1|	-	0.0012	18.3	0.1	0.0032	17.0	0.0	1.7	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
Dala_Dala_lig_C	PF07478.8	gi|479325102|ref|YP_007865156.1|	-	0.0018	17.7	0.6	0.0059	16.0	0.1	1.9	2	0	0	2	2	2	1	D-ala	D-ala	ligase	C-terminus
ATP-grasp	PF02222.17	gi|479325102|ref|YP_007865156.1|	-	0.013	14.8	0.3	0.042	13.2	0.0	2.0	2	0	0	2	2	2	0	ATP-grasp	domain
F420_oxidored	PF03807.12	gi|479325102|ref|YP_007865156.1|	-	0.054	13.9	0.8	8.4	6.8	0.0	3.3	3	0	0	3	3	3	0	NADP	oxidoreductase	coenzyme	F420-dependent
COX2-transmemb	PF09125.5	gi|479325106|ref|YP_007865160.1|	-	2.5	7.7	4.6	15	5.2	0.4	2.9	2	0	0	2	2	2	0	Cytochrome	C	oxidase	subunit	II,	transmembrane
TusA	PF01206.12	gi|479325107|ref|YP_007865161.1|	-	2.2e-25	88.0	0.0	2.6e-25	87.8	0.0	1.0	1	0	0	1	1	1	1	Sulfurtransferase	TusA
DUF2249	PF10006.4	gi|479325107|ref|YP_007865161.1|	-	0.0065	16.0	0.0	0.017	14.6	0.0	1.6	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2249)
SH3_3	PF08239.6	gi|479325107|ref|YP_007865161.1|	-	0.11	12.6	0.0	0.15	12.2	0.0	1.3	1	0	0	1	1	1	0	Bacterial	SH3	domain
Peptidase_U32	PF01136.14	gi|479325108|ref|YP_007865162.1|	-	1.2e-22	79.9	0.0	5.6e-22	77.8	0.0	1.8	1	1	0	1	1	1	1	Peptidase	family	U32
Tn916-Xis	PF09035.5	gi|479325108|ref|YP_007865162.1|	-	0.11	12.6	0.6	2.2	8.4	0.1	2.7	2	0	0	2	2	2	0	Excisionase	from	transposon	Tn916
Inhibitor_I9	PF05922.11	gi|479325108|ref|YP_007865162.1|	-	0.15	12.6	0.2	0.37	11.3	0.0	1.8	2	0	0	2	2	2	0	Peptidase	inhibitor	I9
ECH	PF00378.15	gi|479325109|ref|YP_007865163.1|	-	1.4e-54	184.8	0.0	1.5e-54	184.6	0.0	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
Plectin	PF00681.15	gi|479325109|ref|YP_007865163.1|	-	0.085	12.3	0.0	0.18	11.3	0.0	1.5	1	0	0	1	1	1	0	Plectin	repeat
DLH	PF01738.13	gi|479325109|ref|YP_007865163.1|	-	0.13	11.5	0.2	6.2	6.0	0.0	2.1	2	0	0	2	2	2	0	Dienelactone	hydrolase	family
PaaA_PaaC	PF05138.7	gi|479325110|ref|YP_007865164.1|	-	1.4e-06	27.4	0.0	1.6e-06	27.3	0.0	1.0	1	0	0	1	1	1	1	Phenylacetic	acid	catabolic	protein
PaaX_C	PF08223.6	gi|479325111|ref|YP_007865165.1|	-	1e-29	103.4	0.0	1.1e-29	103.3	0.0	1.0	1	0	0	1	1	1	1	PaaX-like	protein	C-terminal	domain
GATase_6	PF13522.1	gi|479325112|ref|YP_007865166.1|	-	2.9e-07	30.4	0.0	4.4e-07	29.9	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_4	PF13230.1	gi|479325112|ref|YP_007865166.1|	-	9.8e-06	24.4	0.0	1.2e-05	24.2	0.0	1.1	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
Oxidored_FMN	PF00724.15	gi|479325113|ref|YP_007865167.1|	-	1.7e-67	227.8	0.0	2.2e-67	227.4	0.0	1.1	1	0	0	1	1	1	1	NADH:flavin	oxidoreductase	/	NADH	oxidase	family
Pyr_redox	PF00070.22	gi|479325113|ref|YP_007865167.1|	-	2.2e-07	31.1	5.7	5.8e-05	23.4	1.2	4.2	3	1	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|479325113|ref|YP_007865167.1|	-	2.2e-07	30.8	0.0	5.3e-07	29.5	0.0	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
DAO	PF01266.19	gi|479325113|ref|YP_007865167.1|	-	2e-06	26.9	0.4	4.1e-06	25.9	0.3	1.5	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Pyr_redox_3	PF13738.1	gi|479325113|ref|YP_007865167.1|	-	4.5e-05	23.5	0.0	0.00037	20.6	0.0	2.1	1	1	1	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
3HCDH_N	PF02737.13	gi|479325113|ref|YP_007865167.1|	-	7.8e-05	22.3	0.0	0.00013	21.6	0.0	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
HI0933_like	PF03486.9	gi|479325113|ref|YP_007865167.1|	-	0.00019	20.0	0.3	0.00047	18.7	0.1	1.7	2	0	0	2	2	2	1	HI0933-like	protein
Pyr_redox_2	PF07992.9	gi|479325113|ref|YP_007865167.1|	-	0.00022	21.1	0.0	0.00045	20.1	0.0	1.6	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.12	gi|479325113|ref|YP_007865167.1|	-	0.00048	19.2	0.2	0.0014	17.7	0.1	1.8	1	0	0	1	1	1	1	Thi4	family
GIDA	PF01134.17	gi|479325113|ref|YP_007865167.1|	-	0.001	18.0	0.2	0.0016	17.3	0.1	1.2	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
FAD_binding_2	PF00890.19	gi|479325113|ref|YP_007865167.1|	-	0.0023	16.8	0.2	0.0034	16.3	0.2	1.2	1	0	0	1	1	1	1	FAD	binding	domain
FAD_oxidored	PF12831.2	gi|479325113|ref|YP_007865167.1|	-	0.0041	16.2	0.4	0.0061	15.6	0.2	1.2	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
FAD_binding_3	PF01494.14	gi|479325113|ref|YP_007865167.1|	-	0.0046	16.0	0.6	0.0072	15.4	0.4	1.2	1	0	0	1	1	1	1	FAD	binding	domain
AlaDh_PNT_C	PF01262.16	gi|479325113|ref|YP_007865167.1|	-	0.0098	15.4	0.0	0.02	14.4	0.0	1.4	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
NAD_binding_7	PF13241.1	gi|479325113|ref|YP_007865167.1|	-	0.028	14.6	0.0	0.066	13.4	0.0	1.5	1	0	0	1	1	1	0	Putative	NAD(P)-binding
UDPG_MGDP_dh_N	PF03721.9	gi|479325113|ref|YP_007865167.1|	-	0.098	12.0	0.0	0.21	10.9	0.0	1.5	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Amino_oxidase	PF01593.19	gi|479325113|ref|YP_007865167.1|	-	0.15	11.1	0.0	0.2	10.6	0.0	1.2	1	0	0	1	1	1	0	Flavin	containing	amine	oxidoreductase
7kD_DNA_binding	PF02294.13	gi|479325115|ref|YP_007865169.1|	-	2e-43	145.9	4.6	2.2e-43	145.7	3.2	1.0	1	0	0	1	1	1	1	7kD	DNA-binding	domain
XAP5	PF04921.9	gi|479325116|ref|YP_007865170.1|	-	0.044	13.3	0.1	0.045	13.3	0.1	1.0	1	0	0	1	1	1	0	XAP5,	circadian	clock	regulator
SWIM	PF04434.12	gi|479325117|ref|YP_007865171.1|	-	0.0004	19.7	0.0	0.0005	19.4	0.0	1.2	1	0	0	1	1	1	1	SWIM	zinc	finger
DUF2102	PF09875.4	gi|479325117|ref|YP_007865171.1|	-	0.071	12.6	0.1	0.079	12.4	0.1	1.0	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2102)
DUF1286	PF06939.6	gi|479325118|ref|YP_007865172.1|	-	7.1e-35	119.6	2.6	1e-34	119.1	1.8	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1286)
DUF457	PF04307.9	gi|479325118|ref|YP_007865172.1|	-	0.00083	18.7	1.6	0.001	18.4	1.1	1.3	1	0	0	1	1	1	1	Predicted	membrane-bound	metal-dependent	hydrolase	(DUF457)
Adeno_E3_CR2	PF02439.10	gi|479325118|ref|YP_007865172.1|	-	1.2	8.7	6.4	0.25	10.9	0.5	2.5	2	0	0	2	2	2	0	Adenovirus	E3	region	protein	CR2
Methyltransf_11	PF08241.7	gi|479325119|ref|YP_007865173.1|	-	5.1e-19	68.5	0.0	8.1e-19	67.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|479325119|ref|YP_007865173.1|	-	5.3e-19	68.2	0.1	6.3e-19	68.0	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|479325119|ref|YP_007865173.1|	-	4e-16	59.1	0.0	4.8e-16	58.8	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|479325119|ref|YP_007865173.1|	-	6.1e-10	39.1	0.0	8.5e-10	38.6	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|479325119|ref|YP_007865173.1|	-	1.2e-09	38.5	0.0	2.3e-09	37.6	0.0	1.5	2	0	0	2	2	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|479325119|ref|YP_007865173.1|	-	1.5e-09	38.0	0.0	2.4e-09	37.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|479325119|ref|YP_007865173.1|	-	1.6e-09	38.3	0.0	2.3e-09	37.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|479325119|ref|YP_007865173.1|	-	6.4e-09	35.4	0.0	8.6e-09	34.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
RrnaAD	PF00398.15	gi|479325119|ref|YP_007865173.1|	-	4.3e-08	32.5	0.0	9.6e-08	31.3	0.0	1.5	1	1	1	2	2	2	1	Ribosomal	RNA	adenine	dimethylase
Ubie_methyltran	PF01209.13	gi|479325119|ref|YP_007865173.1|	-	1.6e-07	30.6	0.1	2e-07	30.3	0.0	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
PrmA	PF06325.8	gi|479325119|ref|YP_007865173.1|	-	3.5e-06	26.3	0.0	4e-06	26.1	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Met_10	PF02475.11	gi|479325119|ref|YP_007865173.1|	-	5e-06	26.2	0.0	6.9e-06	25.7	0.0	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
FtsJ	PF01728.14	gi|479325119|ref|YP_007865173.1|	-	6.7e-06	26.2	0.0	8e-06	25.9	0.0	1.2	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
Methyltransf_8	PF05148.10	gi|479325119|ref|YP_007865173.1|	-	1.5e-05	24.7	0.0	0.00013	21.6	0.0	2.0	1	1	0	1	1	1	1	Hypothetical	methyltransferase
GidB	PF02527.10	gi|479325119|ref|YP_007865173.1|	-	5.1e-05	22.5	0.0	6.1e-05	22.2	0.0	1.2	1	0	0	1	1	1	1	rRNA	small	subunit	methyltransferase	G
Nol1_Nop2_Fmu	PF01189.12	gi|479325119|ref|YP_007865173.1|	-	8e-05	22.1	0.0	0.00011	21.6	0.0	1.1	1	0	0	1	1	1	1	NOL1/NOP2/sun	family
PCMT	PF01135.14	gi|479325119|ref|YP_007865173.1|	-	8.2e-05	22.2	0.0	0.00012	21.7	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
TehB	PF03848.9	gi|479325119|ref|YP_007865173.1|	-	0.00024	20.3	0.0	0.00033	19.8	0.0	1.2	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
Methyltransf_32	PF13679.1	gi|479325119|ref|YP_007865173.1|	-	0.0013	18.3	0.0	0.0019	17.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
DREV	PF05219.7	gi|479325119|ref|YP_007865173.1|	-	0.0016	17.3	0.0	0.0024	16.8	0.0	1.3	1	1	0	1	1	1	1	DREV	methyltransferase
Methyltransf_9	PF08003.6	gi|479325119|ref|YP_007865173.1|	-	0.0043	15.8	0.0	0.0051	15.5	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1698)
MetW	PF07021.7	gi|479325119|ref|YP_007865173.1|	-	0.0072	15.7	0.0	0.0099	15.2	0.0	1.2	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
Cons_hypoth95	PF03602.10	gi|479325119|ref|YP_007865173.1|	-	0.0091	15.4	0.0	0.011	15.0	0.0	1.2	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
NodS	PF05401.6	gi|479325119|ref|YP_007865173.1|	-	0.011	15.1	0.0	0.012	15.0	0.0	1.2	1	0	0	1	1	1	0	Nodulation	protein	S	(NodS)
Methyltransf_4	PF02390.12	gi|479325119|ref|YP_007865173.1|	-	0.021	13.8	0.0	0.053	12.5	0.0	1.6	1	1	0	2	2	2	0	Putative	methyltransferase
HAD_2	PF13419.1	gi|479325120|ref|YP_007865174.1|	-	1.2e-15	58.1	0.0	5.9e-15	55.9	0.0	1.8	1	1	1	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_6	PF13344.1	gi|479325120|ref|YP_007865174.1|	-	0.0012	18.7	0.0	0.003	17.4	0.0	1.7	2	0	0	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|479325120|ref|YP_007865174.1|	-	0.0052	17.2	0.0	0.017	15.5	0.0	2.1	1	1	1	2	2	2	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|479325120|ref|YP_007865174.1|	-	0.089	12.5	0.0	0.17	11.5	0.0	1.5	1	0	0	1	1	1	0	HAD-hyrolase-like
DUF2955	PF11168.3	gi|479325121|ref|YP_007865175.1|	-	7.7	6.1	14.8	0.057	13.0	3.3	2.4	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2955)
ABC_tran	PF00005.22	gi|479325122|ref|YP_007865176.1|	-	2.3e-50	170.4	0.4	9.4e-25	87.5	0.1	2.2	2	0	0	2	2	2	2	ABC	transporter
AAA_21	PF13304.1	gi|479325122|ref|YP_007865176.1|	-	3.9e-23	82.8	4.7	7.9e-11	42.4	0.0	4.6	2	2	1	3	3	3	2	AAA	domain
AAA_29	PF13555.1	gi|479325122|ref|YP_007865176.1|	-	1.2e-10	40.7	3.3	4.1e-05	23.0	0.1	2.5	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
AAA_10	PF12846.2	gi|479325122|ref|YP_007865176.1|	-	1.6e-10	40.9	2.7	0.0013	18.2	0.0	3.3	2	1	0	3	3	3	3	AAA-like	domain
SMC_N	PF02463.14	gi|479325122|ref|YP_007865176.1|	-	2.4e-10	40.0	3.6	1.8e-05	24.1	0.1	3.3	2	2	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|479325122|ref|YP_007865176.1|	-	9.5e-09	34.7	0.1	0.0012	17.9	0.2	3.8	4	0	0	4	4	4	1	AAA	ATPase	domain
AAA_23	PF13476.1	gi|479325122|ref|YP_007865176.1|	-	1.9e-08	34.9	1.0	0.00024	21.5	0.1	2.4	2	0	0	2	2	2	2	AAA	domain
AAA_19	PF13245.1	gi|479325122|ref|YP_007865176.1|	-	2.9e-08	33.3	0.2	0.099	12.4	0.0	3.4	3	0	0	3	3	3	2	Part	of	AAA	domain
AAA_16	PF13191.1	gi|479325122|ref|YP_007865176.1|	-	5.4e-07	29.7	0.1	0.0028	17.6	0.0	2.3	2	0	0	2	2	2	2	AAA	ATPase	domain
T2SE	PF00437.15	gi|479325122|ref|YP_007865176.1|	-	1.9e-06	26.9	1.8	0.0093	14.8	0.2	2.5	2	0	0	2	2	2	2	Type	II/IV	secretion	system	protein
DUF258	PF03193.11	gi|479325122|ref|YP_007865176.1|	-	4.4e-06	25.9	3.4	0.018	14.2	0.4	2.3	2	0	0	2	2	2	2	Protein	of	unknown	function,	DUF258
AAA_25	PF13481.1	gi|479325122|ref|YP_007865176.1|	-	5.7e-06	25.8	0.1	0.057	12.8	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
NACHT	PF05729.7	gi|479325122|ref|YP_007865176.1|	-	5.7e-06	26.0	1.3	0.01	15.5	0.1	2.5	2	0	0	2	2	2	2	NACHT	domain
AAA_22	PF13401.1	gi|479325122|ref|YP_007865176.1|	-	1.4e-05	25.2	3.5	0.18	11.9	0.0	3.3	3	0	0	3	3	3	2	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|479325122|ref|YP_007865176.1|	-	1.7e-05	24.3	2.7	0.0032	16.9	0.0	2.7	3	0	0	3	3	3	1	FtsK/SpoIIIE	family
DUF87	PF01935.12	gi|479325122|ref|YP_007865176.1|	-	5.6e-05	23.0	3.7	0.13	12.0	0.3	3.3	2	1	1	3	3	3	1	Domain	of	unknown	function	DUF87
Arch_ATPase	PF01637.13	gi|479325122|ref|YP_007865176.1|	-	7.8e-05	22.4	0.4	0.075	12.7	0.1	2.4	2	0	0	2	2	2	2	Archaeal	ATPase
NTPase_1	PF03266.10	gi|479325122|ref|YP_007865176.1|	-	9.5e-05	22.1	2.5	0.11	12.2	0.1	2.9	2	0	0	2	2	2	2	NTPase
UPF0079	PF02367.12	gi|479325122|ref|YP_007865176.1|	-	0.00011	21.8	2.0	0.0094	15.5	0.3	2.8	3	0	0	3	3	2	1	Uncharacterised	P-loop	hydrolase	UPF0079
Mg_chelatase	PF01078.16	gi|479325122|ref|YP_007865176.1|	-	0.00011	21.4	0.4	0.028	13.6	0.0	2.7	3	0	0	3	3	3	1	Magnesium	chelatase,	subunit	ChlI
ABC_ATPase	PF09818.4	gi|479325122|ref|YP_007865176.1|	-	0.00012	20.8	6.5	0.32	9.5	0.2	4.6	4	1	1	5	5	5	2	Predicted	ATPase	of	the	ABC	class
AAA_30	PF13604.1	gi|479325122|ref|YP_007865176.1|	-	0.00012	21.7	0.5	0.52	9.8	0.0	2.7	3	0	0	3	3	2	2	AAA	domain
NB-ARC	PF00931.17	gi|479325122|ref|YP_007865176.1|	-	0.00021	20.2	1.4	0.26	10.0	0.0	2.3	2	0	0	2	2	2	2	NB-ARC	domain
Miro	PF08477.8	gi|479325122|ref|YP_007865176.1|	-	0.00023	21.6	0.3	0.56	10.7	0.0	2.6	2	0	0	2	2	2	2	Miro-like	protein
AAA_18	PF13238.1	gi|479325122|ref|YP_007865176.1|	-	0.00041	20.6	1.9	0.65	10.3	0.2	3.3	3	0	0	3	3	3	1	AAA	domain
cobW	PF02492.14	gi|479325122|ref|YP_007865176.1|	-	0.0006	19.3	2.5	0.054	12.9	0.4	2.7	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
SbcCD_C	PF13558.1	gi|479325122|ref|YP_007865176.1|	-	0.00063	19.6	0.0	0.03	14.2	0.0	3.2	2	1	0	2	2	2	1	Putative	exonuclease	SbcCD,	C	subunit
Zot	PF05707.7	gi|479325122|ref|YP_007865176.1|	-	0.00066	19.1	1.8	0.21	11.0	0.1	3.2	2	2	0	2	2	2	1	Zonular	occludens	toxin	(Zot)
PduV-EutP	PF10662.4	gi|479325122|ref|YP_007865176.1|	-	0.0015	18.0	1.0	0.78	9.2	0.1	3.0	3	0	0	3	3	3	1	Ethanolamine	utilisation	-	propanediol	utilisation
MobB	PF03205.9	gi|479325122|ref|YP_007865176.1|	-	0.0015	18.2	3.0	1	9.0	0.3	2.8	2	0	0	2	2	2	2	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_14	PF13173.1	gi|479325122|ref|YP_007865176.1|	-	0.0019	18.1	0.3	2.4	8.0	0.0	3.1	3	1	0	3	3	2	1	AAA	domain
MMR_HSR1	PF01926.18	gi|479325122|ref|YP_007865176.1|	-	0.0024	17.8	1.3	1.4	8.9	0.0	2.7	2	1	0	2	2	2	1	50S	ribosome-binding	GTPase
KaiC	PF06745.8	gi|479325122|ref|YP_007865176.1|	-	0.0032	16.6	4.6	0.31	10.1	0.0	3.3	3	0	0	3	3	3	1	KaiC
AAA_17	PF13207.1	gi|479325122|ref|YP_007865176.1|	-	0.0046	17.7	7.6	0.12	13.1	0.4	3.3	2	2	0	2	2	2	1	AAA	domain
AAA_5	PF07728.9	gi|479325122|ref|YP_007865176.1|	-	0.0055	16.4	1.2	3.1	7.5	0.0	2.9	3	0	0	3	3	2	0	AAA	domain	(dynein-related	subfamily)
PIF1	PF05970.9	gi|479325122|ref|YP_007865176.1|	-	0.0058	15.6	0.6	1.8	7.3	0.2	3.3	4	0	0	4	4	4	1	PIF1-like	helicase
AAA_24	PF13479.1	gi|479325122|ref|YP_007865176.1|	-	0.0059	16.2	3.1	1.3	8.5	0.7	3.1	3	1	0	3	3	3	1	AAA	domain
AAA_33	PF13671.1	gi|479325122|ref|YP_007865176.1|	-	0.006	16.4	0.2	4.5	7.1	0.0	2.7	3	0	0	3	3	2	0	AAA	domain
DUF815	PF05673.8	gi|479325122|ref|YP_007865176.1|	-	0.0099	14.8	0.2	1.2	7.9	0.0	2.4	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF815)
RNA_helicase	PF00910.17	gi|479325122|ref|YP_007865176.1|	-	0.01	15.9	0.2	5.5	7.2	0.0	2.5	2	0	0	2	2	2	0	RNA	helicase
ATP_bind_1	PF03029.12	gi|479325122|ref|YP_007865176.1|	-	0.016	14.7	0.4	6.5	6.2	0.0	3.0	3	0	0	3	3	3	0	Conserved	hypothetical	ATP	binding	protein
AAA_13	PF13166.1	gi|479325122|ref|YP_007865176.1|	-	0.016	13.6	0.0	0.36	9.2	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
AAA	PF00004.24	gi|479325122|ref|YP_007865176.1|	-	0.017	15.2	0.8	1.9	8.7	0.2	2.6	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ATP-synt_ab	PF00006.20	gi|479325122|ref|YP_007865176.1|	-	0.021	14.3	0.4	0.76	9.2	0.1	2.5	2	1	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
Gtr1_RagA	PF04670.7	gi|479325122|ref|YP_007865176.1|	-	0.023	13.8	2.7	1.6	7.8	0.1	2.3	2	0	0	2	2	2	0	Gtr1/RagA	G	protein	conserved	region
Zeta_toxin	PF06414.7	gi|479325122|ref|YP_007865176.1|	-	0.03	13.4	0.1	8.6	5.3	0.0	2.4	2	0	0	2	2	2	0	Zeta	toxin
Viral_helicase1	PF01443.13	gi|479325122|ref|YP_007865176.1|	-	0.037	13.5	0.1	1.4	8.4	0.0	2.4	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
KAP_NTPase	PF07693.9	gi|479325122|ref|YP_007865176.1|	-	0.05	12.5	0.4	3.2	6.6	0.0	2.6	2	1	0	3	3	3	0	KAP	family	P-loop	domain
Resolvase	PF00239.16	gi|479325122|ref|YP_007865176.1|	-	0.055	13.3	0.2	10	5.9	0.0	2.3	2	0	0	2	2	2	0	Resolvase,	N	terminal	domain
PhoH	PF02562.11	gi|479325122|ref|YP_007865176.1|	-	0.061	12.5	0.2	3.1	6.9	0.1	2.4	2	0	0	2	2	2	0	PhoH-like	protein
Sigma54_activat	PF00158.21	gi|479325122|ref|YP_007865176.1|	-	0.064	12.7	0.4	1.3	8.5	0.0	2.3	2	0	0	2	2	2	0	Sigma-54	interaction	domain
G-alpha	PF00503.15	gi|479325122|ref|YP_007865176.1|	-	0.068	11.8	0.5	7.7	5.0	0.1	2.2	2	0	0	2	2	2	0	G-protein	alpha	subunit
DEAD	PF00270.24	gi|479325122|ref|YP_007865176.1|	-	0.08	12.4	0.3	2	7.8	0.0	2.6	3	0	0	3	3	2	0	DEAD/DEAH	box	helicase
APS_kinase	PF01583.15	gi|479325122|ref|YP_007865176.1|	-	0.086	12.5	0.8	1.8	8.1	0.0	2.8	3	0	0	3	3	3	0	Adenylylsulphate	kinase
Pox_A32	PF04665.7	gi|479325122|ref|YP_007865176.1|	-	0.17	11.1	1.2	1.3	8.2	0.2	2.4	2	0	0	2	2	2	0	Poxvirus	A32	protein
DLIC	PF05783.6	gi|479325122|ref|YP_007865176.1|	-	0.17	10.4	1.0	11	4.5	0.0	2.1	2	0	0	2	2	2	0	Dynein	light	intermediate	chain	(DLIC)
DAP3	PF10236.4	gi|479325122|ref|YP_007865176.1|	-	0.3	9.9	1.6	4.1	6.2	0.1	2.2	2	0	0	2	2	2	0	Mitochondrial	ribosomal	death-associated	protein	3
CbiQ	PF02361.11	gi|479325123|ref|YP_007865177.1|	-	5e-14	52.4	15.4	5e-14	52.4	10.7	1.8	2	0	0	2	2	2	1	Cobalt	transport	protein
MFS_1	PF07690.11	gi|479325126|ref|YP_007865180.1|	-	3.5e-23	81.8	43.3	9.2e-16	57.4	13.0	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
DUF2583	PF10762.4	gi|479325126|ref|YP_007865180.1|	-	4.8	7.3	7.0	5	7.3	0.1	3.4	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2583)
DEAD	PF00270.24	gi|479325127|ref|YP_007865181.1|	-	3.8e-46	156.6	0.1	2.5e-44	150.7	0.0	2.6	1	1	2	3	3	3	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|479325127|ref|YP_007865181.1|	-	1.1e-26	92.4	0.1	3.9e-26	90.7	0.0	2.0	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|479325127|ref|YP_007865181.1|	-	8.9e-08	32.1	0.0	2e-07	31.0	0.0	1.6	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
AAA_19	PF13245.1	gi|479325127|ref|YP_007865181.1|	-	9.8e-05	22.0	0.0	0.0093	15.6	0.0	2.4	2	0	0	2	2	2	1	Part	of	AAA	domain
AAA_22	PF13401.1	gi|479325127|ref|YP_007865181.1|	-	0.0019	18.3	2.8	0.02	15.0	1.4	3.0	2	1	0	2	2	2	1	AAA	domain
SecA_DEAD	PF07517.9	gi|479325127|ref|YP_007865181.1|	-	0.0048	16.2	1.1	0.03	13.6	0.8	2.2	1	1	0	1	1	1	1	SecA	DEAD-like	domain
T4SS-DNA_transf	PF02534.9	gi|479325127|ref|YP_007865181.1|	-	0.0061	15.1	0.0	0.015	13.9	0.0	1.7	1	1	0	1	1	1	1	Type	IV	secretory	system	Conjugative	DNA	transfer
Shikimate_DH	PF01488.15	gi|479325127|ref|YP_007865181.1|	-	0.027	14.5	0.4	1.1	9.3	0.1	3.1	2	1	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
CobA_CobO_BtuR	PF02572.10	gi|479325127|ref|YP_007865181.1|	-	0.051	13.2	0.3	11	5.6	0.0	2.6	1	1	1	2	2	2	0	ATP:corrinoid	adenosyltransferase	BtuR/CobO/CobP
DUF3848	PF12959.2	gi|479325127|ref|YP_007865181.1|	-	0.071	13.0	0.1	0.17	11.8	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3848)
Flavi_DEAD	PF07652.9	gi|479325127|ref|YP_007865181.1|	-	0.097	12.4	0.1	0.28	10.9	0.0	1.8	2	0	0	2	2	2	0	Flavivirus	DEAD	domain
Thermopsin	PF05317.6	gi|479325128|ref|YP_007865182.1|	-	5.6e-83	277.9	20.5	5.6e-83	277.9	14.2	2.5	2	1	0	3	3	3	1	Thermopsin
Rifin_STEVOR	PF02009.11	gi|479325128|ref|YP_007865182.1|	-	1.3	8.5	4.5	2.1	7.9	3.1	1.2	1	0	0	1	1	1	0	Rifin/stevor	family
DUF457	PF04307.9	gi|479325129|ref|YP_007865183.1|	-	5.7e-14	51.7	24.6	1.2e-12	47.4	17.0	3.0	1	1	0	1	1	1	1	Predicted	membrane-bound	metal-dependent	hydrolase	(DUF457)
MFS_1	PF07690.11	gi|479325130|ref|YP_007865184.1|	-	1.4e-36	125.9	75.1	7e-28	97.3	28.7	3.0	1	1	2	3	3	3	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|479325130|ref|YP_007865184.1|	-	2.8e-27	95.4	39.1	3.9e-18	65.2	10.9	2.0	1	1	1	2	2	2	2	Sugar	(and	other)	transporter
MFS_2	PF13347.1	gi|479325130|ref|YP_007865184.1|	-	1.2e-06	27.1	16.6	1.2e-06	27.1	11.5	3.0	1	1	2	3	3	3	2	MFS/sugar	transport	protein
Nuc_H_symport	PF03825.11	gi|479325130|ref|YP_007865184.1|	-	0.00021	20.1	15.7	0.00039	19.3	10.9	1.5	1	0	0	1	1	1	1	Nucleoside	H+	symporter
Amidohydro_1	PF01979.15	gi|479325131|ref|YP_007865185.1|	-	1e-58	199.6	0.5	1.2e-58	199.3	0.4	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|479325131|ref|YP_007865185.1|	-	1.7e-13	51.2	0.0	1.7e-05	25.0	0.0	2.9	2	1	0	2	2	2	2	Amidohydrolase
Amidohydro_5	PF13594.1	gi|479325131|ref|YP_007865185.1|	-	2.6e-13	49.5	0.1	1.1e-12	47.5	0.0	2.2	2	0	0	2	2	2	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|479325131|ref|YP_007865185.1|	-	1.6e-12	47.3	0.6	1.8e-08	34.0	0.0	2.2	2	0	0	2	2	2	2	Amidohydrolase	family
URO-D	PF01208.12	gi|479325131|ref|YP_007865185.1|	-	0.073	11.9	0.0	0.12	11.3	0.0	1.3	1	0	0	1	1	1	0	Uroporphyrinogen	decarboxylase	(URO-D)
ThiS-like	PF14453.1	gi|479325131|ref|YP_007865185.1|	-	0.1	12.4	2.4	0.14	12.0	0.3	2.2	2	1	0	2	2	2	0	ThiS-like	ubiquitin
AMP-binding	PF00501.23	gi|479325132|ref|YP_007865186.1|	-	2.6e-79	266.5	0.0	3.6e-79	266.1	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|479325132|ref|YP_007865186.1|	-	2.1e-15	57.4	0.2	4.6e-15	56.3	0.1	1.6	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
Transp_cyt_pur	PF02133.10	gi|479325133|ref|YP_007865187.1|	-	3.1e-83	279.7	40.8	3.6e-83	279.5	28.3	1.0	1	0	0	1	1	1	1	Permease	for	cytosine/purines,	uracil,	thiamine,	allantoin
AA_permease_2	PF13520.1	gi|479325134|ref|YP_007865188.1|	-	3.9e-43	147.5	57.5	3.9e-43	147.5	39.9	2.6	1	1	1	2	2	2	1	Amino	acid	permease
AA_permease	PF00324.16	gi|479325134|ref|YP_007865188.1|	-	1e-27	96.6	56.2	1e-27	96.6	38.9	2.9	1	1	2	3	3	3	1	Amino	acid	permease
ELFV_dehydrog	PF00208.16	gi|479325135|ref|YP_007865189.1|	-	3.4e-72	242.9	6.9	4.4e-72	242.5	4.2	1.6	2	0	0	2	2	2	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
ELFV_dehydrog_N	PF02812.13	gi|479325135|ref|YP_007865189.1|	-	9.8e-50	167.5	0.0	1.8e-49	166.6	0.0	1.4	1	0	0	1	1	1	1	Glu/Leu/Phe/Val	dehydrogenase,	dimerisation	domain
AlaDh_PNT_C	PF01262.16	gi|479325135|ref|YP_007865189.1|	-	0.0007	19.1	1.6	0.0016	18.0	0.2	2.0	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
2-Hacid_dh_C	PF02826.14	gi|479325135|ref|YP_007865189.1|	-	0.004	16.3	0.4	0.0072	15.4	0.3	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_7	PF13241.1	gi|479325135|ref|YP_007865189.1|	-	0.012	15.8	0.9	0.12	12.6	0.1	2.3	2	0	0	2	2	2	0	Putative	NAD(P)-binding
TrkA_N	PF02254.13	gi|479325135|ref|YP_007865189.1|	-	0.091	12.7	0.3	0.27	11.2	0.2	1.8	1	0	0	1	1	1	0	TrkA-N	domain
Thermopsin	PF05317.6	gi|479325137|ref|YP_007865191.1|	-	4.2e-81	271.7	16.8	4.2e-81	271.7	11.6	3.9	4	1	1	5	5	5	1	Thermopsin
Big_3_4	PF13754.1	gi|479325137|ref|YP_007865191.1|	-	3e-14	53.0	8.3	0.017	15.3	0.0	7.3	5	2	2	7	7	7	5	Bacterial	Ig-like	domain	(group	3)
BiPBP_C	PF06832.7	gi|479325137|ref|YP_007865191.1|	-	1.7e-09	37.4	0.0	0.078	12.9	0.0	4.1	3	1	1	4	4	4	3	Penicillin-Binding	Protein	C-terminus	Family
Y_Y_Y	PF07495.8	gi|479325137|ref|YP_007865191.1|	-	4e-05	23.2	25.8	0.0009	18.9	0.1	5.8	6	0	0	6	6	6	3	Y_Y_Y	domain
DUF4625	PF15418.1	gi|479325137|ref|YP_007865191.1|	-	7.4e-05	22.8	1.7	0.65	10.1	0.0	4.4	4	0	0	4	4	4	1	Domain	of	unknown	function	(DUF4625)
PKD	PF00801.15	gi|479325137|ref|YP_007865191.1|	-	0.02	14.6	11.0	11	5.8	0.2	5.8	6	1	0	6	6	6	0	PKD	domain
DUF4399	PF14347.1	gi|479325137|ref|YP_007865191.1|	-	0.048	13.6	0.0	31	4.6	0.0	3.7	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF4399)
Rifin_STEVOR	PF02009.11	gi|479325137|ref|YP_007865191.1|	-	0.063	12.9	0.8	0.1	12.2	0.6	1.3	1	0	0	1	1	1	0	Rifin/stevor	family
DUF824	PF05688.6	gi|479325137|ref|YP_007865191.1|	-	0.15	11.7	1.1	52	3.5	0.0	4.2	5	0	0	5	5	5	0	Salmonella	repeat	of	unknown	function	(DUF824)
Shisa	PF13908.1	gi|479325137|ref|YP_007865191.1|	-	2.9	8.0	4.1	4.9	7.3	2.8	1.3	1	0	0	1	1	1	0	Wnt	and	FGF	inhibitory	regulator
DUF4303	PF14136.1	gi|479325138|ref|YP_007865192.1|	-	0.0068	16.0	0.1	0.0072	15.9	0.1	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4303)
DUF4358	PF14270.1	gi|479325138|ref|YP_007865192.1|	-	0.15	11.9	0.8	0.17	11.7	0.6	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4358)
Fic	PF02661.13	gi|479325139|ref|YP_007865193.1|	-	2.7e-08	34.4	0.3	5.6e-08	33.3	0.1	1.8	2	1	0	2	2	2	1	Fic/DOC	family
W2	PF02020.13	gi|479325139|ref|YP_007865193.1|	-	0.0047	16.8	0.1	0.028	14.3	0.0	2.1	2	0	0	2	2	2	1	eIF4-gamma/eIF5/eIF2-epsilon
MFS_1	PF07690.11	gi|479325141|ref|YP_007865195.1|	-	6.8e-50	169.7	46.2	1.1e-35	123.0	19.2	2.6	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|479325141|ref|YP_007865195.1|	-	4.8e-10	38.6	9.9	4.8e-10	38.6	6.9	2.8	2	2	0	2	2	2	2	Sugar	(and	other)	transporter
MFS_2	PF13347.1	gi|479325141|ref|YP_007865195.1|	-	3.8e-05	22.2	4.8	3.8e-05	22.2	3.3	3.2	1	1	1	2	2	2	1	MFS/sugar	transport	protein
OATP	PF03137.15	gi|479325141|ref|YP_007865195.1|	-	0.0029	15.7	0.6	0.0029	15.7	0.4	3.5	3	1	1	4	4	4	2	Organic	Anion	Transporter	Polypeptide	(OATP)	family
PIN	PF01850.16	gi|479325142|ref|YP_007865196.1|	-	2.7e-11	43.8	0.4	3.1e-11	43.6	0.2	1.1	1	0	0	1	1	1	1	PIN	domain
MraZ	PF02381.13	gi|479325143|ref|YP_007865197.1|	-	0.069	12.9	0.0	0.13	12.0	0.0	1.5	1	0	0	1	1	1	0	MraZ	protein
S1FA	PF04689.8	gi|479325146|ref|YP_007865200.1|	-	0.033	14.0	3.6	0.19	11.5	0.6	2.3	2	0	0	2	2	2	0	DNA	binding	protein	S1FA
YwhD	PF08741.5	gi|479325146|ref|YP_007865200.1|	-	0.093	12.1	0.0	0.12	11.8	0.0	1.2	1	0	0	1	1	1	0	YwhD	family
Hemerythrin	PF01814.18	gi|479325147|ref|YP_007865201.1|	-	0.00024	21.2	1.0	0.16	12.1	0.0	2.1	1	1	1	2	2	2	2	Hemerythrin	HHE	cation	binding	domain
Zn_Tnp_IS1595	PF12760.2	gi|479325148|ref|YP_007865202.1|	-	7.9e-06	25.5	4.8	0.0001	22.0	0.4	2.1	2	0	0	2	2	2	1	Transposase	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|479325148|ref|YP_007865202.1|	-	6.6e-05	22.4	1.9	0.005	16.4	0.2	2.1	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
TF_Zn_Ribbon	PF08271.7	gi|479325148|ref|YP_007865202.1|	-	0.0019	17.4	4.3	0.061	12.6	0.1	2.4	2	1	0	2	2	2	1	TFIIB	zinc-binding
zinc_ribbon_2	PF13240.1	gi|479325148|ref|YP_007865202.1|	-	0.0073	15.7	1.3	3.1	7.3	0.0	2.6	2	0	0	2	2	2	1	zinc-ribbon	domain
DUF2387	PF09526.5	gi|479325148|ref|YP_007865202.1|	-	0.012	15.5	3.3	1.1	9.2	0.1	2.1	1	1	1	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
Zn-ribbon_8	PF09723.5	gi|479325148|ref|YP_007865202.1|	-	0.017	15.0	3.2	6.1	6.8	0.0	3.1	3	0	0	3	3	3	0	Zinc	ribbon	domain
DZR	PF12773.2	gi|479325148|ref|YP_007865202.1|	-	0.036	13.8	4.8	1.4	8.7	3.3	2.3	1	1	0	1	1	1	0	Double	zinc	ribbon
A2L_zn_ribbon	PF08792.5	gi|479325148|ref|YP_007865202.1|	-	0.054	12.9	6.5	2.1	7.9	0.6	3.0	2	1	0	2	2	2	0	A2L	zinc	ribbon	domain
TFIIS_C	PF01096.13	gi|479325148|ref|YP_007865202.1|	-	0.065	12.8	8.3	3.1	7.4	0.0	3.1	2	1	1	3	3	3	0	Transcription	factor	S-II	(TFIIS)
C1_3	PF07649.7	gi|479325148|ref|YP_007865202.1|	-	0.13	12.3	0.1	0.13	12.3	0.1	2.6	3	0	0	3	3	3	0	C1-like	domain
Cas_CXXC_CXXC	PF09706.5	gi|479325148|ref|YP_007865202.1|	-	0.15	12.2	3.2	9.6	6.4	0.8	2.4	1	1	1	2	2	2	0	CRISPR-associated	protein	(Cas_CXXC_CXXC)
zinc_ribbon_5	PF13719.1	gi|479325148|ref|YP_007865202.1|	-	0.22	11.1	8.0	1.9	8.1	1.0	3.0	2	1	0	2	2	2	0	zinc-ribbon	domain
zf-CCHC_5	PF14787.1	gi|479325148|ref|YP_007865202.1|	-	0.24	10.9	2.6	3.9	7.0	0.3	2.4	2	0	0	2	2	2	0	GAG-polyprotein	viral	zinc-finger
zf-NADH-PPase	PF09297.6	gi|479325148|ref|YP_007865202.1|	-	0.27	10.7	7.2	3.9	7.0	0.7	2.6	3	0	0	3	3	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
zf-ribbon_3	PF13248.1	gi|479325148|ref|YP_007865202.1|	-	0.3	10.3	7.2	1.7	7.9	0.0	2.5	3	0	0	3	3	2	0	zinc-ribbon	domain
IBR	PF01485.16	gi|479325148|ref|YP_007865202.1|	-	0.31	10.9	6.4	0.25	11.2	0.5	2.1	1	1	0	2	2	2	0	IBR	domain
UPF0547	PF10571.4	gi|479325148|ref|YP_007865202.1|	-	0.31	10.7	6.2	3.5	7.4	0.0	2.5	3	0	0	3	3	2	0	Uncharacterised	protein	family	UPF0547
zinc_ribbon_4	PF13717.1	gi|479325148|ref|YP_007865202.1|	-	0.36	10.5	8.5	4.6	7.0	1.3	3.1	2	1	0	2	2	2	0	zinc-ribbon	domain
FYVE_2	PF02318.11	gi|479325148|ref|YP_007865202.1|	-	0.39	10.6	3.7	0.3	11.0	0.3	1.9	1	1	1	2	2	2	0	FYVE-type	zinc	finger
zf-C4_ClpX	PF06689.8	gi|479325148|ref|YP_007865202.1|	-	0.5	9.9	0.1	0.5	9.9	0.1	2.7	2	1	1	3	3	3	0	ClpX	C4-type	zinc	finger
Nudix_N_2	PF14803.1	gi|479325148|ref|YP_007865202.1|	-	0.55	9.9	6.1	8.7	6.1	0.1	2.9	2	1	0	2	2	2	0	Nudix	N-terminal
zf-UBR	PF02207.15	gi|479325148|ref|YP_007865202.1|	-	0.6	9.8	7.8	2.5	7.8	0.6	2.6	2	1	0	2	2	2	0	Putative	zinc	finger	in	N-recognin	(UBR	box)
Lar_restr_allev	PF14354.1	gi|479325148|ref|YP_007865202.1|	-	0.77	10.1	3.8	3.7	7.9	0.3	2.2	1	1	0	2	2	2	0	Restriction	alleviation	protein	Lar
zf-B_box	PF00643.19	gi|479325148|ref|YP_007865202.1|	-	0.9	9.4	7.5	11	6.0	0.5	2.9	2	1	0	2	2	2	0	B-box	zinc	finger
zf-CHY	PF05495.7	gi|479325148|ref|YP_007865202.1|	-	0.93	9.7	4.2	4	7.6	2.9	1.9	1	1	0	1	1	1	0	CHY	zinc	finger
DUF2296	PF10058.4	gi|479325148|ref|YP_007865202.1|	-	1	9.1	5.8	3.1	7.6	0.8	2.5	2	1	0	2	2	2	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
PhnA_Zn_Ribbon	PF08274.7	gi|479325148|ref|YP_007865202.1|	-	1.1	9.1	8.6	2.2	8.1	0.4	2.7	2	1	0	2	2	2	0	PhnA	Zinc-Ribbon
RNA_POL_M_15KD	PF02150.11	gi|479325148|ref|YP_007865202.1|	-	1.1	9.0	6.2	0.66	9.7	0.9	2.4	2	1	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
zf-UBP	PF02148.14	gi|479325148|ref|YP_007865202.1|	-	1.1	9.4	4.3	6	7.0	3.0	2.0	1	1	0	1	1	1	0	Zn-finger	in	ubiquitin-hydrolases	and	other	protein
CpXC	PF14353.1	gi|479325148|ref|YP_007865202.1|	-	1.4	8.8	3.8	5.7	6.9	2.6	2.0	1	1	0	1	1	1	0	CpXC	protein
zf-ISL3	PF14690.1	gi|479325148|ref|YP_007865202.1|	-	1.5	8.9	9.5	8	6.5	2.4	2.9	2	1	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-CSL	PF05207.8	gi|479325148|ref|YP_007865202.1|	-	1.6	8.3	4.7	11	5.5	3.2	2.3	1	1	0	1	1	1	0	CSL	zinc	finger
zf-TFIIB	PF13453.1	gi|479325148|ref|YP_007865202.1|	-	1.8	7.8	5.2	4.4	6.5	1.5	2.3	1	1	1	2	2	2	0	Transcription	factor	zinc-finger
DUF35_N	PF12172.3	gi|479325148|ref|YP_007865202.1|	-	2.1	8.3	6.4	6.7	6.7	0.2	2.8	3	0	0	3	3	3	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Rubredoxin	PF00301.15	gi|479325148|ref|YP_007865202.1|	-	3.1	7.7	8.1	18	5.2	0.6	3.1	3	0	0	3	3	3	0	Rubredoxin
DUF2082	PF09855.4	gi|479325148|ref|YP_007865202.1|	-	5.1	7.0	5.6	6.3	6.7	0.0	2.7	2	1	1	3	3	3	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
zf-FPG_IleRS	PF06827.9	gi|479325148|ref|YP_007865202.1|	-	5.8	6.6	6.0	4.8	6.9	0.1	2.8	3	0	0	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
Auto_anti-p27	PF06677.7	gi|479325148|ref|YP_007865202.1|	-	6.4	6.6	6.0	3.3	7.5	0.4	2.3	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
LigB	PF02900.13	gi|479325149|ref|YP_007865203.1|	-	9.8e-57	191.9	0.0	1.1e-56	191.8	0.0	1.0	1	0	0	1	1	1	1	Catalytic	LigB	subunit	of	aromatic	ring-opening	dioxygenase
Memo	PF01875.12	gi|479325149|ref|YP_007865203.1|	-	0.0003	19.7	0.0	0.0013	17.6	0.0	1.8	2	0	0	2	2	2	1	Memo-like	protein
Cass2	PF14526.1	gi|479325149|ref|YP_007865203.1|	-	0.062	13.3	0.0	0.13	12.2	0.0	1.5	1	0	0	1	1	1	0	Integron-associated	effector	binding	protein
HpaB_N	PF11794.3	gi|479325150|ref|YP_007865204.1|	-	2.4e-79	266.4	0.0	3.6e-79	265.8	0.0	1.2	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
HpaB	PF03241.8	gi|479325150|ref|YP_007865204.1|	-	2.6e-51	173.4	0.0	3.6e-51	172.9	0.0	1.2	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	C	terminal
TP6A_N	PF04406.9	gi|479325150|ref|YP_007865204.1|	-	0.069	12.8	0.0	0.14	11.8	0.0	1.5	1	0	0	1	1	1	0	Type	IIB	DNA	topoisomerase
Glyoxalase	PF00903.20	gi|479325151|ref|YP_007865205.1|	-	9.2e-25	87.0	0.4	7.8e-13	48.5	0.3	2.1	2	0	0	2	2	2	2	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase_2	PF12681.2	gi|479325151|ref|YP_007865205.1|	-	7.7e-16	58.6	0.1	3.9e-10	40.3	0.0	2.4	2	0	0	2	2	2	2	Glyoxalase-like	domain
Glyoxalase_4	PF13669.1	gi|479325151|ref|YP_007865205.1|	-	2e-14	53.5	0.0	4.9e-07	29.7	0.0	3.4	2	1	1	3	3	3	3	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
GIDE	PF12483.3	gi|479325151|ref|YP_007865205.1|	-	0.048	13.0	0.0	0.078	12.3	0.0	1.2	1	0	0	1	1	1	0	E3	Ubiquitin	ligase
Pox_A_type_inc	PF04508.7	gi|479325151|ref|YP_007865205.1|	-	2.3	8.2	6.0	4.8	7.2	0.3	2.9	3	0	0	3	3	3	0	Viral	A-type	inclusion	protein	repeat
Flavin_Reduct	PF01613.13	gi|479325152|ref|YP_007865206.1|	-	1.9e-26	92.7	0.0	2.2e-26	92.5	0.0	1.0	1	0	0	1	1	1	1	Flavin	reductase	like	domain
DUF447	PF04289.7	gi|479325152|ref|YP_007865206.1|	-	8.1e-06	25.5	0.1	1.3e-05	24.8	0.1	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF447)
Sugar_tr	PF00083.19	gi|479325153|ref|YP_007865207.1|	-	5.1e-42	143.9	30.5	7.7e-42	143.4	21.2	1.2	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|479325153|ref|YP_007865207.1|	-	6.2e-30	104.0	94.7	7.4e-27	93.9	37.9	3.6	1	1	2	3	3	3	2	Major	Facilitator	Superfamily
DUF1228	PF06779.9	gi|479325153|ref|YP_007865207.1|	-	0.0053	16.7	10.5	0.029	14.3	0.3	3.9	3	1	0	3	3	3	2	Protein	of	unknown	function	(DUF1228)
HTH_10	PF04967.7	gi|479325154|ref|YP_007865208.1|	-	5.6e-22	77.0	0.1	9.8e-22	76.2	0.1	1.4	1	0	0	1	1	1	1	HTH	DNA	binding	domain
HTH_17	PF12728.2	gi|479325154|ref|YP_007865208.1|	-	0.0052	17.0	0.0	0.011	16.0	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
GerE	PF00196.14	gi|479325154|ref|YP_007865208.1|	-	0.0075	15.5	0.1	0.12	11.7	0.0	2.6	3	0	0	3	3	3	1	Bacterial	regulatory	proteins,	luxR	family
HTH_20	PF12840.2	gi|479325154|ref|YP_007865208.1|	-	0.013	15.2	0.0	0.033	13.9	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_Tnp_1_2	PF13022.1	gi|479325154|ref|YP_007865208.1|	-	0.025	14.3	0.1	0.29	10.9	0.0	2.2	2	1	0	2	2	2	0	Helix-turn-helix	of	insertion	element	transposase
HTH_24	PF13412.1	gi|479325154|ref|YP_007865208.1|	-	0.035	13.4	0.1	0.093	12.1	0.0	1.7	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
DUF134	PF02001.11	gi|479325154|ref|YP_007865208.1|	-	0.11	12.4	0.0	0.22	11.4	0.0	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	DUF134
Sigma70_r4	PF04545.11	gi|479325154|ref|YP_007865208.1|	-	0.12	11.6	0.0	0.3	10.4	0.0	1.7	1	0	0	1	1	1	0	Sigma-70,	region	4
AMP-binding	PF00501.23	gi|479325155|ref|YP_007865209.1|	-	7.6e-73	245.2	0.0	9e-73	245.0	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|479325155|ref|YP_007865209.1|	-	1.3e-14	54.9	0.2	2.8e-13	50.6	0.1	2.5	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
CRISPR_Cas2	PF09827.4	gi|479325155|ref|YP_007865209.1|	-	0.016	15.2	0.0	0.093	12.8	0.0	2.1	2	0	0	2	2	2	0	CRISPR	associated	protein	Cas2
Acyl-CoA_dh_1	PF00441.19	gi|479325156|ref|YP_007865210.1|	-	2.5e-45	154.2	0.3	4.5e-45	153.4	0.2	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|479325156|ref|YP_007865210.1|	-	5.4e-16	57.8	0.1	9.3e-16	57.0	0.1	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_N	PF02771.11	gi|479325156|ref|YP_007865210.1|	-	2.1e-14	54.0	0.0	7.3e-14	52.3	0.0	2.0	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_2	PF08028.6	gi|479325156|ref|YP_007865210.1|	-	1.2e-13	51.4	0.0	7.1e-13	48.9	0.0	2.1	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Thiolase_C	PF02803.13	gi|479325157|ref|YP_007865211.1|	-	0.0041	16.5	0.0	0.01	15.2	0.0	1.7	2	0	0	2	2	2	1	Thiolase,	C-terminal	domain
Thiolase_C	PF02803.13	gi|479325158|ref|YP_007865212.1|	-	0.00017	20.9	0.0	0.54	9.6	0.0	2.6	2	0	0	2	2	2	2	Thiolase,	C-terminal	domain
Peptidase_M22	PF00814.20	gi|479325158|ref|YP_007865212.1|	-	0.12	11.8	0.0	0.29	10.5	0.0	1.6	1	0	0	1	1	1	0	Glycoprotease	family
Thiolase_N	PF00108.18	gi|479325158|ref|YP_007865212.1|	-	0.12	11.2	0.0	3.8	6.3	0.0	2.2	2	0	0	2	2	2	0	Thiolase,	N-terminal	domain
DUF35_N	PF12172.3	gi|479325159|ref|YP_007865213.1|	-	2.6e-07	30.3	0.4	5.1e-07	29.4	0.3	1.4	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF35	PF01796.12	gi|479325159|ref|YP_007865213.1|	-	1.1e-05	25.5	0.0	1.7e-05	24.9	0.0	1.3	1	0	0	1	1	1	1	DUF35	OB-fold	domain
DUF2616	PF11077.3	gi|479325159|ref|YP_007865213.1|	-	0.055	12.9	0.1	0.072	12.5	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2616)
NMD3	PF04981.8	gi|479325159|ref|YP_007865213.1|	-	0.074	12.1	0.8	0.12	11.4	0.5	1.3	1	0	0	1	1	1	0	NMD3	family
DUF35_N	PF12172.3	gi|479325160|ref|YP_007865214.1|	-	8.5e-10	38.2	0.1	1.7e-09	37.3	0.0	1.5	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF35	PF01796.12	gi|479325160|ref|YP_007865214.1|	-	0.0076	16.4	0.0	0.017	15.3	0.0	1.6	2	0	0	2	2	2	1	DUF35	OB-fold	domain
DZR	PF12773.2	gi|479325160|ref|YP_007865214.1|	-	0.039	13.7	0.4	0.072	12.9	0.3	1.4	1	0	0	1	1	1	0	Double	zinc	ribbon
Tetraspannin	PF00335.15	gi|479325160|ref|YP_007865214.1|	-	0.11	11.7	0.0	0.14	11.4	0.0	1.1	1	0	0	1	1	1	0	Tetraspanin	family
zf-ribbon_3	PF13248.1	gi|479325160|ref|YP_007865214.1|	-	0.14	11.3	3.3	0.28	10.4	2.3	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
RuvB_N	PF05496.7	gi|479325161|ref|YP_007865215.1|	-	0.1	11.6	0.0	0.11	11.5	0.0	1.1	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
TPP_enzyme_C	PF02775.16	gi|479325162|ref|YP_007865216.1|	-	3e-22	78.8	0.0	6.7e-22	77.6	0.0	1.6	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
POR_N	PF01855.14	gi|479325162|ref|YP_007865216.1|	-	5.4e-14	52.2	0.0	3.4e-13	49.6	0.0	1.9	2	0	0	2	2	2	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Fer4	PF00037.22	gi|479325162|ref|YP_007865216.1|	-	5.3e-10	38.4	14.5	3.8e-07	29.4	3.7	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|479325162|ref|YP_007865216.1|	-	5.2e-09	36.3	21.8	3.7e-06	27.2	8.0	2.3	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|479325162|ref|YP_007865216.1|	-	6.2e-09	35.5	11.6	1.3e-08	34.5	8.0	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|479325162|ref|YP_007865216.1|	-	8.3e-09	34.8	14.1	2.4e-05	23.9	2.7	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Transketolase_C	PF02780.15	gi|479325162|ref|YP_007865216.1|	-	1.5e-07	31.4	0.1	1.1e-05	25.3	0.0	2.9	3	0	0	3	3	3	1	Transketolase,	C-terminal	domain
TPP_enzyme_N	PF02776.13	gi|479325162|ref|YP_007865216.1|	-	1.7e-07	30.8	0.2	8.7e-05	22.0	0.0	2.3	2	0	0	2	2	2	2	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
Fer4_6	PF12837.2	gi|479325162|ref|YP_007865216.1|	-	7.2e-06	25.6	20.3	0.00016	21.4	3.2	2.9	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|479325162|ref|YP_007865216.1|	-	2.4e-05	24.5	12.7	5.8e-05	23.2	8.8	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|479325162|ref|YP_007865216.1|	-	4.2e-05	23.3	11.1	0.00035	20.3	7.3	2.4	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|479325162|ref|YP_007865216.1|	-	8e-05	22.5	9.0	0.00027	20.9	6.3	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|479325162|ref|YP_007865216.1|	-	0.00011	22.4	4.4	0.018	15.3	0.2	2.6	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|479325162|ref|YP_007865216.1|	-	0.00013	22.6	6.6	0.0012	19.5	0.7	2.7	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
DXP_synthase_N	PF13292.1	gi|479325162|ref|YP_007865216.1|	-	0.0024	16.8	1.2	0.054	12.4	0.3	2.5	2	1	1	3	3	3	1	1-deoxy-D-xylulose-5-phosphate	synthase
Fer4_3	PF12798.2	gi|479325162|ref|YP_007865216.1|	-	0.012	16.1	6.6	0.012	16.1	4.6	3.1	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|479325162|ref|YP_007865216.1|	-	0.013	15.7	3.3	0.013	15.7	2.3	2.7	3	0	0	3	3	2	0	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|479325162|ref|YP_007865216.1|	-	0.017	15.6	10.8	0.042	14.4	1.3	2.6	1	1	1	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.1	gi|479325162|ref|YP_007865216.1|	-	0.044	14.1	10.8	0.39	11.1	1.6	2.6	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.1	gi|479325162|ref|YP_007865216.1|	-	0.052	13.9	12.2	18	5.8	8.5	2.6	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
POR	PF01558.13	gi|479325163|ref|YP_007865217.1|	-	2e-29	102.7	0.8	2.6e-29	102.3	0.6	1.1	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
AMP-binding	PF00501.23	gi|479325164|ref|YP_007865218.1|	-	5.9e-77	258.8	0.0	7.5e-77	258.4	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|479325164|ref|YP_007865218.1|	-	1.7e-18	67.3	0.1	3.2e-18	66.4	0.0	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
AhpC-TSA	PF00578.16	gi|479325165|ref|YP_007865219.1|	-	1e-34	118.8	0.0	1.3e-34	118.5	0.0	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|479325165|ref|YP_007865219.1|	-	4.4e-22	78.2	0.0	5e-22	78.0	0.0	1.0	1	0	0	1	1	1	1	Redoxin
DUF899	PF05988.7	gi|479325165|ref|YP_007865219.1|	-	0.0014	18.1	0.0	0.0017	17.8	0.0	1.1	1	0	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF899)
AhpC-TSA_2	PF13911.1	gi|479325165|ref|YP_007865219.1|	-	0.011	15.6	0.0	0.016	15.0	0.0	1.2	1	0	0	1	1	1	0	AhpC/TSA	antioxidant	enzyme
DUF4174	PF13778.1	gi|479325165|ref|YP_007865219.1|	-	0.037	14.1	0.0	0.053	13.6	0.0	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4174)
CorA	PF01544.13	gi|479325167|ref|YP_007865221.1|	-	4.7e-24	84.9	7.5	5.8e-24	84.6	5.2	1.1	1	0	0	1	1	1	1	CorA-like	Mg2+	transporter	protein
SDF	PF00375.13	gi|479325167|ref|YP_007865221.1|	-	0.086	11.5	2.6	0.12	11.1	1.8	1.1	1	0	0	1	1	1	0	Sodium:dicarboxylate	symporter	family
DUF3923	PF13061.1	gi|479325167|ref|YP_007865221.1|	-	0.13	12.1	2.8	0.29	10.9	1.9	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3923)
dTDP_sugar_isom	PF00908.12	gi|479325168|ref|YP_007865222.1|	-	6.6e-37	126.5	0.0	7.4e-37	126.3	0.0	1.0	1	0	0	1	1	1	1	dTDP-4-dehydrorhamnose	3,5-epimerase
FdtA	PF05523.6	gi|479325168|ref|YP_007865222.1|	-	0.038	13.4	0.0	0.049	13.1	0.0	1.2	1	0	0	1	1	1	0	WxcM-like,	C-terminal
dTDP_sugar_isom	PF00908.12	gi|479325169|ref|YP_007865223.1|	-	1.9e-07	30.5	0.0	2.4e-07	30.2	0.0	1.1	1	0	0	1	1	1	1	dTDP-4-dehydrorhamnose	3,5-epimerase
RHH_1	PF01402.16	gi|479325171|ref|YP_007865225.1|	-	0.0027	17.5	1.1	0.0051	16.6	0.2	1.8	2	1	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
RVP	PF00077.15	gi|479325172|ref|YP_007865226.1|	-	0.082	12.8	0.0	0.095	12.6	0.0	1.2	1	0	0	1	1	1	0	Retroviral	aspartyl	protease
ELFV_dehydrog	PF00208.16	gi|479325173|ref|YP_007865227.1|	-	1.2e-69	234.5	4.0	2.6e-69	233.5	2.8	1.5	2	0	0	2	2	2	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
ELFV_dehydrog_N	PF02812.13	gi|479325173|ref|YP_007865227.1|	-	2.2e-47	159.8	0.0	3.8e-47	159.1	0.0	1.4	1	0	0	1	1	1	1	Glu/Leu/Phe/Val	dehydrogenase,	dimerisation	domain
2-Hacid_dh_C	PF02826.14	gi|479325173|ref|YP_007865227.1|	-	0.0006	19.0	0.3	0.0011	18.2	0.2	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
ThiF	PF00899.16	gi|479325173|ref|YP_007865227.1|	-	0.043	13.6	0.3	0.13	12.0	0.2	1.8	1	0	0	1	1	1	0	ThiF	family
AdoHcyase_NAD	PF00670.16	gi|479325173|ref|YP_007865227.1|	-	0.071	12.9	1.2	0.17	11.7	0.6	1.7	1	1	1	2	2	2	0	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
AlaDh_PNT_C	PF01262.16	gi|479325173|ref|YP_007865227.1|	-	0.099	12.2	1.3	0.5	9.9	0.2	2.2	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
NAD_binding_7	PF13241.1	gi|479325173|ref|YP_007865227.1|	-	0.16	12.2	0.7	0.63	10.3	0.1	2.1	2	0	0	2	2	2	0	Putative	NAD(P)-binding
INTS2	PF14750.1	gi|479325174|ref|YP_007865228.1|	-	0.047	11.2	0.0	0.063	10.7	0.0	1.1	1	0	0	1	1	1	0	Integrator	complex	subunit	2
LRAT	PF04970.8	gi|479325174|ref|YP_007865228.1|	-	0.12	12.2	0.1	0.21	11.5	0.1	1.4	1	1	0	1	1	1	0	Lecithin	retinol	acyltransferase
HTH_27	PF13463.1	gi|479325175|ref|YP_007865229.1|	-	1.5e-05	25.1	0.1	4e-05	23.8	0.0	1.7	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_45	PF14947.1	gi|479325175|ref|YP_007865229.1|	-	1.6e-05	24.6	2.3	5.6e-05	22.8	0.2	2.1	2	0	0	2	2	2	1	Winged	helix-turn-helix
HTH_34	PF13601.1	gi|479325175|ref|YP_007865229.1|	-	7.3e-05	22.7	0.2	0.00035	20.5	0.1	2.1	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|479325175|ref|YP_007865229.1|	-	0.00065	19.3	0.0	0.0011	18.6	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_36	PF13730.1	gi|479325175|ref|YP_007865229.1|	-	0.0026	17.8	0.1	0.016	15.3	0.0	2.1	2	0	0	2	2	2	1	Helix-turn-helix	domain
DUF4423	PF14394.1	gi|479325175|ref|YP_007865229.1|	-	0.0034	16.9	0.2	0.019	14.5	0.0	1.8	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4423)
HTH_24	PF13412.1	gi|479325175|ref|YP_007865229.1|	-	0.0051	16.1	0.0	0.0079	15.5	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
RPA_C	PF08784.6	gi|479325175|ref|YP_007865229.1|	-	0.02	15.2	0.0	2.6	8.4	0.0	2.2	2	0	0	2	2	2	0	Replication	protein	A	C	terminal
Mrr_N	PF14338.1	gi|479325175|ref|YP_007865229.1|	-	0.033	14.2	0.0	0.083	12.9	0.0	1.7	1	1	0	1	1	1	0	Mrr	N-terminal	domain
HTH_Crp_2	PF13545.1	gi|479325175|ref|YP_007865229.1|	-	0.037	13.8	0.0	0.15	11.8	0.0	1.9	2	0	0	2	2	2	0	Crp-like	helix-turn-helix	domain
FeoC	PF09012.5	gi|479325175|ref|YP_007865229.1|	-	0.038	13.6	0.0	0.064	12.9	0.0	1.4	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
PCI	PF01399.22	gi|479325175|ref|YP_007865229.1|	-	0.074	13.3	0.0	6.9	7.0	0.0	2.0	1	1	1	2	2	2	0	PCI	domain
Phage_rep_O	PF04492.8	gi|479325175|ref|YP_007865229.1|	-	0.076	13.2	0.0	1.8	8.8	0.0	2.1	1	1	1	2	2	2	0	Bacteriophage	replication	protein	O
DUF1803	PF08820.5	gi|479325175|ref|YP_007865229.1|	-	0.099	12.3	0.1	0.17	11.5	0.0	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1803)
MarR	PF01047.17	gi|479325175|ref|YP_007865229.1|	-	0.13	11.9	0.0	0.22	11.2	0.0	1.3	1	0	0	1	1	1	0	MarR	family
Protein_K	PF12283.3	gi|479325175|ref|YP_007865229.1|	-	0.3	10.9	1.5	0.71	9.8	1.0	1.6	1	0	0	1	1	1	0	Bacteriophage	protein	K
IlvN	PF07991.7	gi|479325176|ref|YP_007865230.1|	-	3.3e-60	202.2	0.6	4.6e-60	201.7	0.4	1.2	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
IlvC	PF01450.14	gi|479325176|ref|YP_007865230.1|	-	2.6e-12	46.8	0.0	4.3e-12	46.1	0.0	1.3	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
F420_oxidored	PF03807.12	gi|479325176|ref|YP_007865230.1|	-	7.6e-07	29.4	0.1	1.5e-06	28.4	0.1	1.6	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
AdoHcyase_NAD	PF00670.16	gi|479325176|ref|YP_007865230.1|	-	8e-07	29.0	0.1	1.3e-06	28.3	0.1	1.3	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.14	gi|479325176|ref|YP_007865230.1|	-	1.4e-06	27.5	0.0	2.7e-06	26.6	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_2	PF03446.10	gi|479325176|ref|YP_007865230.1|	-	3.8e-05	23.5	0.1	6.9e-05	22.7	0.0	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.18	gi|479325176|ref|YP_007865230.1|	-	0.00062	19.5	0.1	1.3	8.7	0.1	2.8	2	1	1	3	3	3	2	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
CoA_binding	PF02629.14	gi|479325176|ref|YP_007865230.1|	-	0.0086	16.5	0.4	0.028	14.9	0.1	1.9	2	0	0	2	2	2	1	CoA	binding	domain
Shikimate_DH	PF01488.15	gi|479325176|ref|YP_007865230.1|	-	0.062	13.3	0.0	0.12	12.4	0.0	1.4	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
ThiC	PF01964.13	gi|479325177|ref|YP_007865231.1|	-	6e-68	229.2	0.0	7e-68	229.0	0.0	1.0	1	0	0	1	1	1	1	ThiC	family
Arch_ATPase	PF01637.13	gi|479325178|ref|YP_007865232.1|	-	1.6e-34	119.6	3.3	2.6e-34	118.9	2.3	1.3	1	0	0	1	1	1	1	Archaeal	ATPase
AAA_14	PF13173.1	gi|479325178|ref|YP_007865232.1|	-	5.9e-12	45.6	1.9	3.8e-05	23.5	0.4	2.5	1	1	0	2	2	2	2	AAA	domain
AAA_22	PF13401.1	gi|479325178|ref|YP_007865232.1|	-	1.7e-08	34.6	0.1	1.8e-07	31.3	0.0	2.3	2	1	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|479325178|ref|YP_007865232.1|	-	1.2e-05	25.4	0.0	2.3e-05	24.4	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA	PF00004.24	gi|479325178|ref|YP_007865232.1|	-	1.7e-05	25.0	0.0	5.2e-05	23.4	0.0	1.8	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_35	PF14516.1	gi|479325178|ref|YP_007865232.1|	-	0.00047	18.8	0.0	0.054	12.1	0.0	2.1	2	0	0	2	2	2	2	AAA-like	domain
Miro	PF08477.8	gi|479325178|ref|YP_007865232.1|	-	0.0063	17.0	0.1	0.013	16.0	0.0	1.6	1	0	0	1	1	1	1	Miro-like	protein
MobB	PF03205.9	gi|479325178|ref|YP_007865232.1|	-	0.0085	15.8	0.1	0.02	14.5	0.1	1.6	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_17	PF13207.1	gi|479325178|ref|YP_007865232.1|	-	0.012	16.4	1.0	0.04	14.7	0.7	2.3	1	1	0	1	1	1	0	AAA	domain
6PF2K	PF01591.13	gi|479325178|ref|YP_007865232.1|	-	0.013	14.5	0.1	0.026	13.5	0.0	1.5	1	0	0	1	1	1	0	6-phosphofructo-2-kinase
BLOC1_2	PF10046.4	gi|479325178|ref|YP_007865232.1|	-	0.02	15.0	0.9	0.042	13.9	0.2	1.8	2	0	0	2	2	1	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
SRPRB	PF09439.5	gi|479325178|ref|YP_007865232.1|	-	0.027	13.6	1.4	0.3	10.2	0.1	2.3	1	1	0	2	2	2	0	Signal	recognition	particle	receptor	beta	subunit
HTH_45	PF14947.1	gi|479325178|ref|YP_007865232.1|	-	0.076	12.8	1.9	2.2	8.1	0.0	2.7	2	0	0	2	2	2	0	Winged	helix-turn-helix
AAA_23	PF13476.1	gi|479325178|ref|YP_007865232.1|	-	4.9	7.4	10.3	19	5.5	7.1	2.2	1	1	0	1	1	1	0	AAA	domain
PaREP1	PF05942.6	gi|479325180|ref|YP_007865234.1|	-	6.3e-07	29.2	1.5	8.1e-07	28.9	1.0	1.1	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
Aldedh	PF00171.17	gi|479325184|ref|YP_007865238.1|	-	1.3e-148	495.1	0.1	1.5e-148	494.9	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
DUF4310	PF14187.1	gi|479325184|ref|YP_007865238.1|	-	0.035	13.6	0.2	0.056	12.9	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4310)
Radical_SAM	PF04055.16	gi|479325185|ref|YP_007865239.1|	-	1.4e-15	57.8	0.0	2.4e-14	53.8	0.0	2.2	1	1	1	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|479325185|ref|YP_007865239.1|	-	2.7e-07	30.8	0.0	5.1e-07	29.9	0.0	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|479325185|ref|YP_007865239.1|	-	2.4e-05	24.3	0.0	4.9e-05	23.3	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
SPASM	PF13186.1	gi|479325185|ref|YP_007865239.1|	-	2.4e-05	24.5	0.1	2.4e-05	24.5	0.0	1.9	2	0	0	2	2	2	1	Iron-sulfur	cluster-binding	domain
IF2_N	PF04760.10	gi|479325185|ref|YP_007865239.1|	-	0.014	14.9	0.9	3	7.5	0.0	3.5	3	0	0	3	3	3	0	Translation	initiation	factor	IF-2,	N-terminal	region
Radical_SAM	PF04055.16	gi|479325186|ref|YP_007865240.1|	-	6.2e-27	94.8	0.0	2.4e-23	83.1	0.0	2.4	1	1	1	2	2	2	2	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|479325186|ref|YP_007865240.1|	-	9.9e-10	38.6	0.0	2.2e-09	37.5	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|479325186|ref|YP_007865240.1|	-	2.7e-09	37.0	0.0	5.7e-09	36.0	0.0	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
SPASM	PF13186.1	gi|479325186|ref|YP_007865240.1|	-	4.8e-08	33.2	0.6	4.8e-08	33.2	0.4	1.9	2	0	0	2	2	2	1	Iron-sulfur	cluster-binding	domain
AP_endonuc_2	PF01261.19	gi|479325186|ref|YP_007865240.1|	-	2.2e-05	23.8	0.0	0.013	14.7	0.0	2.3	1	1	1	2	2	2	2	Xylose	isomerase-like	TIM	barrel
Glyco_hydro_97	PF10566.4	gi|479325186|ref|YP_007865240.1|	-	0.03	13.4	0.0	0.94	8.5	0.0	2.1	2	0	0	2	2	2	0	Glycoside	hydrolase	97
Cas_Cas4	PF01930.12	gi|479325186|ref|YP_007865240.1|	-	0.078	12.8	0.3	0.16	11.8	0.2	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF83
RHH_1	PF01402.16	gi|479325187|ref|YP_007865241.1|	-	0.0012	18.5	0.0	0.0027	17.5	0.0	1.7	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
SpoIISB_antitox	PF14185.1	gi|479325187|ref|YP_007865241.1|	-	0.17	11.6	0.7	0.31	10.8	0.0	1.8	2	1	0	2	2	2	0	Antitoxin	SpoIISB,	type	II	toxin-antitoxin	system
PaREP1	PF05942.6	gi|479325188|ref|YP_007865242.1|	-	7.3e-23	80.6	0.0	1.1e-22	80.1	0.0	1.2	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
NTP_transf_2	PF01909.18	gi|479325189|ref|YP_007865243.1|	-	1.6e-09	37.9	1.4	2.4e-09	37.4	1.0	1.3	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
HEPN	PF05168.9	gi|479325190|ref|YP_007865244.1|	-	4e-34	117.0	0.2	4.9e-34	116.7	0.1	1.0	1	0	0	1	1	1	1	HEPN	domain
PaREP1	PF05942.6	gi|479325191|ref|YP_007865245.1|	-	2.3e-24	85.4	0.1	3.4e-24	84.9	0.1	1.3	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
AAA_14	PF13173.1	gi|479325192|ref|YP_007865246.1|	-	1.6e-24	86.2	0.9	3.8e-24	85.0	0.1	1.9	2	0	0	2	2	2	1	AAA	domain
DUF4143	PF13635.1	gi|479325192|ref|YP_007865246.1|	-	4.8e-10	39.4	1.7	6.8e-10	38.9	1.0	1.6	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
Arch_ATPase	PF01637.13	gi|479325192|ref|YP_007865246.1|	-	3.4e-07	30.2	6.3	2.9e-05	23.8	0.7	3.4	3	1	1	4	4	4	2	Archaeal	ATPase
AAA	PF00004.24	gi|479325192|ref|YP_007865246.1|	-	0.00031	20.9	0.0	0.00084	19.5	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.1	gi|479325192|ref|YP_007865246.1|	-	0.0058	16.6	0.0	0.01	15.8	0.0	1.3	1	0	0	1	1	1	1	AAA	ATPase	domain
HTH_10	PF04967.7	gi|479325192|ref|YP_007865246.1|	-	0.049	13.2	0.0	0.14	11.8	0.0	1.7	1	0	0	1	1	1	0	HTH	DNA	binding	domain
Tox-REase-3	PF15647.1	gi|479325192|ref|YP_007865246.1|	-	0.051	13.3	1.1	0.069	12.9	0.1	1.7	2	0	0	2	2	2	0	Restriction	endonuclease	fold	toxin	3
FtsK_SpoIIIE	PF01580.13	gi|479325192|ref|YP_007865246.1|	-	0.06	12.8	0.1	0.31	10.4	0.0	1.9	1	1	1	2	2	2	0	FtsK/SpoIIIE	family
HTH_36	PF13730.1	gi|479325192|ref|YP_007865246.1|	-	0.063	13.4	0.1	0.33	11.0	0.0	2.1	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_38	PF13936.1	gi|479325192|ref|YP_007865246.1|	-	0.065	12.7	0.0	0.15	11.6	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
GerE	PF00196.14	gi|479325192|ref|YP_007865246.1|	-	0.093	12.0	0.0	0.24	10.7	0.0	1.7	1	1	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
DUF793	PF05633.6	gi|479325192|ref|YP_007865246.1|	-	0.097	11.4	0.1	0.2	10.4	0.1	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF793)
HTH_24	PF13412.1	gi|479325192|ref|YP_007865246.1|	-	0.11	11.8	0.0	0.25	10.7	0.0	1.6	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
HTH_5	PF01022.15	gi|479325192|ref|YP_007865246.1|	-	0.12	12.1	0.0	0.24	11.0	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
DUF1033	PF06279.6	gi|479325192|ref|YP_007865246.1|	-	8	6.3	9.1	2	8.2	3.6	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1033)
Cas_Cmr3	PF09700.5	gi|479325193|ref|YP_007865247.1|	-	7.1e-13	48.6	0.2	7.3e-11	42.0	0.0	2.2	1	1	1	2	2	2	2	CRISPR-associated	protein	(Cas_Cmr3)
DUF3692	PF12469.3	gi|479325194|ref|YP_007865248.1|	-	7.4e-30	103.5	0.7	2.4e-29	101.9	0.5	2.0	1	0	0	1	1	1	1	CRISPR-associated	protein
TAFH	PF07531.9	gi|479325194|ref|YP_007865248.1|	-	0.12	11.9	0.1	1.3	8.7	0.0	2.5	2	0	0	2	2	2	0	NHR1	homology	to	TAF
RAMPs	PF03787.10	gi|479325195|ref|YP_007865249.1|	-	2.1e-09	37.5	0.3	4.2e-09	36.5	0.2	1.6	1	1	0	1	1	1	1	RAMP	superfamily
RAMPs	PF03787.10	gi|479325196|ref|YP_007865250.1|	-	2.5e-05	24.2	3.8	6.5e-05	22.8	1.1	2.5	2	1	0	2	2	2	1	RAMP	superfamily
RAMPs	PF03787.10	gi|479325198|ref|YP_007865252.1|	-	1.2e-09	38.2	0.0	2.4e-09	37.3	0.0	1.4	1	1	0	1	1	1	1	RAMP	superfamily
PIN	PF01850.16	gi|479325199|ref|YP_007865253.1|	-	0.024	14.9	0.0	0.026	14.8	0.0	1.1	1	0	0	1	1	1	0	PIN	domain
Cas_DxTHG	PF09455.5	gi|479325200|ref|YP_007865254.1|	-	1e-44	153.2	9.5	1.2e-44	152.9	6.6	1.1	1	0	0	1	1	1	1	CRISPR-associated	(Cas)	DxTHG	family
PaREP1	PF05942.6	gi|479325202|ref|YP_007865256.1|	-	1.7e-23	82.7	0.7	2.5e-23	82.1	0.1	1.5	2	0	0	2	2	2	1	Archaeal	PaREP1/PaREP8	family
OrfB_Zn_ribbon	PF07282.6	gi|479327030|ref|YP_007865257.1|	-	6.9e-21	73.6	3.1	8.2e-21	73.4	0.1	2.5	3	0	0	3	3	3	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|479327030|ref|YP_007865257.1|	-	6.3e-08	32.2	0.6	1.1e-07	31.5	0.4	1.3	1	0	0	1	1	1	1	Probable	transposase
zf-RING_4	PF14570.1	gi|479327030|ref|YP_007865257.1|	-	0.052	13.1	2.4	0.071	12.7	1.0	1.7	2	0	0	2	2	2	0	RING/Ubox	like	zinc-binding	domain
PaREP1	PF05942.6	gi|479325203|ref|YP_007865258.1|	-	6.5e-33	113.0	6.0	6.5e-33	113.0	4.2	1.4	2	0	0	2	2	2	1	Archaeal	PaREP1/PaREP8	family
DUF357	PF04010.8	gi|479325203|ref|YP_007865258.1|	-	0.00035	20.1	0.2	0.0011	18.6	0.1	2.0	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF357)
DUF4398	PF14346.1	gi|479325203|ref|YP_007865258.1|	-	0.37	10.8	5.3	0.12	12.4	1.8	1.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4398)
Glycos_transf_2	PF00535.21	gi|479325205|ref|YP_007865260.1|	-	1.5e-21	76.8	0.4	2.2e-21	76.2	0.3	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|479325205|ref|YP_007865260.1|	-	2.9e-12	46.8	0.0	4.4e-12	46.2	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.4	gi|479325205|ref|YP_007865260.1|	-	2e-05	23.8	0.1	2.8e-05	23.3	0.1	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_transf_21	PF13506.1	gi|479325205|ref|YP_007865260.1|	-	3.1e-05	23.3	0.0	7.8e-05	22.0	0.0	1.7	1	1	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_trans_2_3	PF13632.1	gi|479325205|ref|YP_007865260.1|	-	8.1e-05	22.4	0.1	0.00012	21.8	0.1	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glycos_transf_2	PF00535.21	gi|479325206|ref|YP_007865261.1|	-	2.9e-29	101.9	0.2	4.4e-29	101.3	0.1	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|479325206|ref|YP_007865261.1|	-	9.1e-24	84.5	0.0	7.8e-23	81.4	0.0	1.9	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.4	gi|479325206|ref|YP_007865261.1|	-	2.7e-15	56.1	0.8	2.6e-14	52.9	0.5	2.0	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|479325206|ref|YP_007865261.1|	-	4.7e-12	46.0	1.9	5.8e-11	42.4	1.3	2.0	1	1	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_tranf_2_5	PF13712.1	gi|479325206|ref|YP_007865261.1|	-	9e-06	25.0	0.2	5.8e-05	22.4	0.0	2.2	2	1	1	3	3	3	1	Glycosyltransferase	like	family
Glyco_tranf_2_4	PF13704.1	gi|479325206|ref|YP_007865261.1|	-	3.6e-05	24.0	0.0	0.00024	21.3	0.0	2.1	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.1	gi|479325206|ref|YP_007865261.1|	-	0.11	11.8	0.1	0.64	9.2	0.0	2.0	1	1	0	1	1	1	0	Glycosyl	transferase	family	21
DUF373	PF04123.8	gi|479325206|ref|YP_007865261.1|	-	0.11	11.5	4.1	0.26	10.2	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF373)
Glycos_transf_2	PF00535.21	gi|479325207|ref|YP_007865262.1|	-	6.1e-20	71.5	0.1	8.3e-20	71.1	0.1	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|479325207|ref|YP_007865262.1|	-	1.5e-05	24.8	0.0	2.2e-05	24.3	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.1	gi|479325207|ref|YP_007865262.1|	-	0.0003	21.0	0.0	0.00093	19.4	0.0	1.8	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
TMEM171	PF15471.1	gi|479325207|ref|YP_007865262.1|	-	0.027	13.2	0.8	0.04	12.6	0.5	1.2	1	0	0	1	1	1	0	Transmembrane	protein	family	171
Orbi_NS3	PF01616.11	gi|479325207|ref|YP_007865262.1|	-	0.04	12.8	0.0	0.063	12.2	0.0	1.3	1	0	0	1	1	1	0	Orbivirus	NS3
PUF	PF00806.14	gi|479325207|ref|YP_007865262.1|	-	0.12	11.9	0.0	0.22	11.1	0.0	1.5	1	0	0	1	1	1	0	Pumilio-family	RNA	binding	repeat
Glycos_transf_2	PF00535.21	gi|479325208|ref|YP_007865263.1|	-	6.4e-09	35.7	0.0	9.8e-09	35.1	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|479325208|ref|YP_007865263.1|	-	0.0047	16.7	0.0	0.0064	16.3	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
hemP	PF10636.4	gi|479325208|ref|YP_007865263.1|	-	0.013	15.1	0.1	0.027	14.0	0.1	1.5	1	0	0	1	1	1	0	Hemin	uptake	protein	hemP
Methyltransf_21	PF05050.7	gi|479325209|ref|YP_007865264.1|	-	9.8e-18	64.6	0.0	1.6e-17	63.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	FkbM	domain
Methyltransf_18	PF12847.2	gi|479325209|ref|YP_007865264.1|	-	6e-10	39.6	0.0	1.1e-09	38.8	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
V_cholerae_RfbT	PF05575.6	gi|479325209|ref|YP_007865264.1|	-	0.001	18.1	0.2	0.0033	16.5	0.1	1.7	1	1	0	1	1	1	1	Vibrio	cholerae	RfbT	protein
PrmA	PF06325.8	gi|479325209|ref|YP_007865264.1|	-	0.0013	17.9	0.2	0.0027	16.8	0.1	1.5	1	1	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Met_10	PF02475.11	gi|479325209|ref|YP_007865264.1|	-	0.0019	17.8	0.6	0.0036	16.9	0.4	1.4	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_23	PF13489.1	gi|479325209|ref|YP_007865264.1|	-	0.0076	15.9	0.0	0.01	15.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_22	PF13383.1	gi|479325209|ref|YP_007865264.1|	-	0.025	14.1	0.1	0.039	13.4	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
DIPSY	PF11763.3	gi|479325209|ref|YP_007865264.1|	-	0.043	13.6	0.1	0.15	11.8	0.0	1.9	1	1	1	2	2	2	0	Cell-wall	adhesin	ligand-binding	C-terminal
Methyltransf_9	PF08003.6	gi|479325209|ref|YP_007865264.1|	-	0.046	12.4	0.0	0.076	11.6	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1698)
Glycos_transf_2	PF00535.21	gi|479325210|ref|YP_007865265.1|	-	1.5e-29	102.8	0.1	2.5e-29	102.1	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|479325210|ref|YP_007865265.1|	-	5.4e-22	78.7	0.0	1.2e-21	77.5	0.0	1.4	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.4	gi|479325210|ref|YP_007865265.1|	-	1.2e-13	50.8	2.3	7.7e-13	48.1	1.5	1.9	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_5	PF13712.1	gi|479325210|ref|YP_007865265.1|	-	1.4e-07	30.9	0.0	0.024	13.8	0.0	3.1	2	1	1	3	3	3	3	Glycosyltransferase	like	family
Glyco_trans_2_3	PF13632.1	gi|479325210|ref|YP_007865265.1|	-	3e-07	30.3	0.1	1.2e-06	28.4	0.0	1.7	2	0	0	2	2	2	1	Glycosyl	transferase	family	group	2
Glyco_transf_21	PF13506.1	gi|479325210|ref|YP_007865265.1|	-	7.2e-07	28.6	0.0	1.4e-06	27.7	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_tranf_2_4	PF13704.1	gi|479325210|ref|YP_007865265.1|	-	1.2e-05	25.5	0.0	4e-05	23.8	0.0	1.8	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
Thioredoxin_8	PF13905.1	gi|479325210|ref|YP_007865265.1|	-	0.0083	16.2	0.3	4.9	7.3	0.1	2.4	2	0	0	2	2	2	2	Thioredoxin-like
Glycos_transf_2	PF00535.21	gi|479325211|ref|YP_007865266.1|	-	3.6e-10	39.7	4.3	1e-09	38.2	3.0	1.8	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|479325211|ref|YP_007865266.1|	-	5.9e-05	22.9	0.0	0.00037	20.3	0.0	1.9	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glycos_transf_1	PF00534.15	gi|479325212|ref|YP_007865267.1|	-	1.3e-30	106.1	0.0	1.6e-30	105.8	0.0	1.1	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|479325212|ref|YP_007865267.1|	-	2.7e-13	50.2	0.0	4.1e-13	49.6	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|479325212|ref|YP_007865267.1|	-	1.6e-12	47.5	0.0	2.4e-12	46.9	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|479325213|ref|YP_007865268.1|	-	8.2e-09	35.4	0.1	3e-07	30.3	0.0	2.3	1	1	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_4_4	PF13579.1	gi|479325213|ref|YP_007865268.1|	-	0.0075	16.4	0.0	0.016	15.3	0.0	1.6	1	1	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_4_2	PF13477.1	gi|479325213|ref|YP_007865268.1|	-	0.012	15.3	0.2	0.042	13.6	0.1	2.1	1	1	0	1	1	1	0	Glycosyl	transferase	4-like
Glycos_transf_2	PF00535.21	gi|479325214|ref|YP_007865269.1|	-	6.6e-14	51.9	2.3	1.6e-13	50.7	1.6	1.8	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|479325214|ref|YP_007865269.1|	-	3.8e-05	23.6	0.0	5.4e-05	23.1	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
PUA_2	PF14306.1	gi|479325214|ref|YP_007865269.1|	-	0.085	12.2	0.0	0.16	11.3	0.0	1.4	1	0	0	1	1	1	0	PUA-like	domain
Ogr_Delta	PF04606.7	gi|479325215|ref|YP_007865270.1|	-	0.077	12.6	0.1	0.16	11.6	0.0	1.4	1	0	0	1	1	1	0	Ogr/Delta-like	zinc	finger
Methyltransf_21	PF05050.7	gi|479325216|ref|YP_007865271.1|	-	3.9e-17	62.6	0.4	4.9e-17	62.3	0.2	1.1	1	0	0	1	1	1	1	Methyltransferase	FkbM	domain
Met_10	PF02475.11	gi|479325216|ref|YP_007865271.1|	-	9.1e-07	28.6	0.6	1.2e-06	28.3	0.4	1.3	1	1	0	1	1	1	1	Met-10+	like-protein
Methyltransf_18	PF12847.2	gi|479325216|ref|YP_007865271.1|	-	1.2e-05	25.7	0.0	1.6e-05	25.4	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_22	PF13383.1	gi|479325216|ref|YP_007865271.1|	-	0.0021	17.6	0.1	0.003	17.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|479325216|ref|YP_007865271.1|	-	0.0031	16.6	0.1	0.0047	16.0	0.1	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_23	PF13489.1	gi|479325216|ref|YP_007865271.1|	-	0.066	12.9	0.0	0.076	12.7	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
Glycos_transf_2	PF00535.21	gi|479325217|ref|YP_007865272.1|	-	3.5e-34	117.9	0.5	6.6e-34	117.0	0.4	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|479325217|ref|YP_007865272.1|	-	2.6e-17	63.3	0.0	7.7e-17	61.8	0.0	1.7	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.4	gi|479325217|ref|YP_007865272.1|	-	8.5e-13	48.0	0.2	1.2e-12	47.4	0.1	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_5	PF13712.1	gi|479325217|ref|YP_007865272.1|	-	5.5e-11	42.1	0.2	4.2e-07	29.4	0.0	3.1	2	1	1	3	3	3	2	Glycosyltransferase	like	family
Glyco_trans_2_3	PF13632.1	gi|479325217|ref|YP_007865272.1|	-	0.00095	18.9	0.8	0.0019	17.9	0.6	1.6	1	1	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_transf_21	PF13506.1	gi|479325217|ref|YP_007865272.1|	-	0.0018	17.5	0.0	0.0087	15.3	0.0	1.9	1	1	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_tranf_2_4	PF13704.1	gi|479325217|ref|YP_007865272.1|	-	0.0035	17.6	0.0	0.006	16.8	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_transf_7C	PF02709.9	gi|479325217|ref|YP_007865272.1|	-	0.083	12.3	0.0	0.21	11.0	0.0	1.6	1	0	0	1	1	1	0	N-terminal	domain	of	galactosyltransferase
Glycos_transf_1	PF00534.15	gi|479325218|ref|YP_007865273.1|	-	2.2e-27	95.5	0.1	4.6e-27	94.5	0.1	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|479325218|ref|YP_007865273.1|	-	4.1e-10	39.9	0.0	8.7e-10	38.8	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|479325218|ref|YP_007865273.1|	-	1e-07	31.8	0.0	2.2e-07	30.7	0.0	1.5	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_1_2	PF13524.1	gi|479325218|ref|YP_007865273.1|	-	5e-05	23.4	0.0	0.00019	21.6	0.0	1.9	1	1	1	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.1	gi|479325218|ref|YP_007865273.1|	-	0.0019	18.3	0.0	0.0063	16.6	0.0	1.9	2	1	0	2	2	2	1	Glycosyl	transferase	4-like	domain
Glycos_transf_1	PF00534.15	gi|479325219|ref|YP_007865274.1|	-	4.7e-25	87.9	0.0	4.2e-24	84.8	0.0	2.2	1	1	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|479325219|ref|YP_007865274.1|	-	1.7e-13	50.9	0.0	2.8e-13	50.1	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|479325219|ref|YP_007865274.1|	-	4.9e-10	39.5	0.0	1.1e-09	38.4	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Epimerase_2	PF02350.14	gi|479325219|ref|YP_007865274.1|	-	0.0008	18.2	0.0	0.0096	14.7	0.0	2.1	1	1	0	1	1	1	1	UDP-N-acetylglucosamine	2-epimerase
Glyco_transf_4	PF13439.1	gi|479325219|ref|YP_007865274.1|	-	0.0067	16.1	0.1	0.035	13.8	0.1	2.2	1	1	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_4_4	PF13579.1	gi|479325219|ref|YP_007865274.1|	-	0.044	13.9	0.0	0.072	13.2	0.0	1.3	1	0	0	1	1	1	0	Glycosyl	transferase	4-like	domain
Glycos_transf_2	PF00535.21	gi|479325220|ref|YP_007865275.1|	-	6.8e-21	74.6	0.7	9.2e-21	74.2	0.4	1.3	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|479325220|ref|YP_007865275.1|	-	5.1e-08	32.9	0.0	6.1e-08	32.7	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.4	gi|479325220|ref|YP_007865275.1|	-	1.2e-05	24.6	0.3	1.6e-05	24.1	0.2	1.2	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Polysacc_synt	PF01943.12	gi|479325221|ref|YP_007865276.1|	-	4e-25	88.6	38.4	4e-25	88.6	26.6	2.6	2	1	0	2	2	2	1	Polysaccharide	biosynthesis	protein
Polysacc_synt_3	PF13440.1	gi|479325221|ref|YP_007865276.1|	-	3.2e-19	69.3	30.3	3.2e-19	69.3	21.0	2.3	2	0	0	2	2	2	1	Polysaccharide	biosynthesis	protein
MatE	PF01554.13	gi|479325221|ref|YP_007865276.1|	-	2.6e-06	27.1	13.7	2.6e-06	27.1	9.5	3.7	2	1	1	3	3	3	1	MatE
Polysacc_synt_C	PF14667.1	gi|479325221|ref|YP_007865276.1|	-	0.00022	21.0	36.1	0.0005	19.8	9.4	4.5	3	2	0	4	4	4	2	Polysaccharide	biosynthesis	C-terminal	domain
Glycos_transf_1	PF00534.15	gi|479325222|ref|YP_007865277.1|	-	7.3e-20	71.0	0.0	1.4e-19	70.1	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|479325222|ref|YP_007865277.1|	-	6.2e-13	49.0	0.0	1e-12	48.3	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|479325222|ref|YP_007865277.1|	-	2.6e-08	33.7	0.0	7e-08	32.3	0.0	1.6	2	0	0	2	2	2	1	Glycosyltransferase	Family	4
Glyco_trans_1_2	PF13524.1	gi|479325222|ref|YP_007865277.1|	-	7.2e-08	32.6	0.0	1.4e-07	31.7	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.1	gi|479325222|ref|YP_007865277.1|	-	0.007	16.5	0.0	0.12	12.5	0.0	2.5	2	1	0	2	2	2	1	Glycosyl	transferase	4-like	domain
Glycos_transf_1	PF00534.15	gi|479325225|ref|YP_007865280.1|	-	7.3e-20	71.0	3.0	9.2e-19	67.4	0.8	2.6	2	1	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|479325225|ref|YP_007865280.1|	-	1.4e-08	34.9	0.0	2.8e-08	34.0	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|479325225|ref|YP_007865280.1|	-	0.00054	19.7	0.1	0.00088	19.0	0.0	1.4	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
UPF0104	PF03706.8	gi|479325226|ref|YP_007865281.1|	-	0.0022	17.3	0.3	0.0025	17.1	0.2	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0104)
DUF2207	PF09972.4	gi|479325226|ref|YP_007865281.1|	-	0.012	14.2	2.1	0.012	14.1	1.5	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
DUF1469	PF07332.6	gi|479325226|ref|YP_007865281.1|	-	0.016	14.8	0.1	0.019	14.6	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1469)
Cytochrom_B_C	PF00032.12	gi|479325226|ref|YP_007865281.1|	-	0.017	15.3	1.9	0.021	15.0	1.3	1.1	1	0	0	1	1	1	0	Cytochrome	b(C-terminal)/b6/petD
CopD	PF05425.8	gi|479325226|ref|YP_007865281.1|	-	0.027	14.6	0.1	0.03	14.5	0.1	1.1	1	0	0	1	1	1	0	Copper	resistance	protein	D
PsbN	PF02468.10	gi|479325226|ref|YP_007865281.1|	-	0.05	13.2	2.7	5.3	6.7	0.9	2.2	2	0	0	2	2	2	0	Photosystem	II	reaction	centre	N	protein	(psbN)
Herpes_glycop	PF01528.11	gi|479325226|ref|YP_007865281.1|	-	0.053	12.2	0.1	0.053	12.2	0.1	1.1	1	0	0	1	1	1	0	Herpesvirus	glycoprotein	M
DUF4131	PF13567.1	gi|479325226|ref|YP_007865281.1|	-	0.093	12.1	0.0	0.099	12.0	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
Tetraspannin	PF00335.15	gi|479325226|ref|YP_007865281.1|	-	0.18	11.0	5.0	0.22	10.7	3.4	1.1	1	0	0	1	1	1	0	Tetraspanin	family
DUF3951	PF13131.1	gi|479325226|ref|YP_007865281.1|	-	1.1	9.0	8.8	1.3	8.8	0.8	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3951)
Arteri_Gl	PF00951.13	gi|479325226|ref|YP_007865281.1|	-	1.7	8.1	4.0	2.1	7.9	2.7	1.1	1	0	0	1	1	1	0	Arterivirus	GL	envelope	glycoprotein
IncA	PF04156.9	gi|479325226|ref|YP_007865281.1|	-	1.9	8.0	11.1	3.1	7.3	7.7	1.5	1	1	0	1	1	1	0	IncA	protein
NVEALA	PF14055.1	gi|479325226|ref|YP_007865281.1|	-	2.9	7.6	6.6	9.1	6.0	0.4	2.3	2	1	0	2	2	2	0	NVEALA	protein
DUF3784	PF12650.2	gi|479325226|ref|YP_007865281.1|	-	3.4	7.6	8.0	4.2	7.3	5.6	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3784)
DUF3270	PF11674.3	gi|479325226|ref|YP_007865281.1|	-	9	6.3	7.0	0.74	9.8	0.9	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3270)
UPF0118	PF01594.11	gi|479325228|ref|YP_007865283.1|	-	0.00024	20.2	3.5	0.00026	20.0	2.4	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF20
DUF724	PF05266.9	gi|479325228|ref|YP_007865283.1|	-	0.015	14.8	0.2	0.018	14.6	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF724)
TarH	PF02203.10	gi|479325228|ref|YP_007865283.1|	-	0.017	14.9	3.3	0.021	14.6	2.3	1.1	1	0	0	1	1	1	0	Tar	ligand	binding	domain	homologue
HSCB_C	PF07743.8	gi|479325228|ref|YP_007865283.1|	-	0.023	15.1	0.2	0.047	14.1	0.1	1.5	1	0	0	1	1	1	0	HSCB	C-terminal	oligomerisation	domain
Laminin_II	PF06009.7	gi|479325228|ref|YP_007865283.1|	-	0.03	14.0	2.1	0.041	13.6	1.4	1.2	1	0	0	1	1	1	0	Laminin	Domain	II
DUF848	PF05852.6	gi|479325228|ref|YP_007865283.1|	-	0.084	12.7	0.6	0.12	12.2	0.4	1.3	1	1	0	1	1	1	0	Gammaherpesvirus	protein	of	unknown	function	(DUF848)
DUF2935	PF11155.3	gi|479325228|ref|YP_007865283.1|	-	0.095	12.7	0.5	0.12	12.4	0.3	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF2935)
TBPIP	PF07106.8	gi|479325228|ref|YP_007865283.1|	-	0.14	11.7	1.9	0.2	11.1	1.3	1.3	1	0	0	1	1	1	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
DUF342	PF03961.8	gi|479325228|ref|YP_007865283.1|	-	0.15	10.4	0.7	0.17	10.3	0.5	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
FerA	PF08165.6	gi|479325228|ref|YP_007865283.1|	-	0.2	11.3	1.6	0.48	10.1	0.1	2.2	1	1	2	3	3	3	0	FerA	(NUC095)	domain
DUF4363	PF14276.1	gi|479325228|ref|YP_007865283.1|	-	0.64	9.7	4.3	0.7	9.6	1.2	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4363)
DUF1664	PF07889.7	gi|479325228|ref|YP_007865283.1|	-	0.86	9.4	4.8	0.24	11.1	0.3	1.9	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
FlxA	PF14282.1	gi|479325228|ref|YP_007865283.1|	-	5	7.1	9.8	41	4.1	6.8	2.3	1	1	0	1	1	1	0	FlxA-like	protein
DUF1616	PF07760.6	gi|479325229|ref|YP_007865284.1|	-	1e-15	57.6	6.8	1.2e-15	57.4	4.7	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1616)
DHHW	PF14286.1	gi|479325229|ref|YP_007865284.1|	-	0.05	12.9	2.2	0.061	12.6	1.5	1.1	1	0	0	1	1	1	0	DHHW	protein
Sec62	PF03839.11	gi|479325229|ref|YP_007865284.1|	-	0.16	11.3	1.6	0.21	10.9	1.1	1.1	1	0	0	1	1	1	0	Translocation	protein	Sec62
DUF1616	PF07760.6	gi|479325230|ref|YP_007865285.1|	-	9.4e-21	74.1	11.6	1.3e-20	73.7	8.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1616)
MFS_1	PF07690.11	gi|479325230|ref|YP_007865285.1|	-	0.00077	18.2	7.8	0.001	17.8	5.4	1.1	1	0	0	1	1	1	1	Major	Facilitator	Superfamily
UPF0239	PF06783.6	gi|479325232|ref|YP_007865287.1|	-	0.082	12.8	1.9	0.11	12.4	1.3	1.3	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0239)
PsbX	PF06596.6	gi|479325232|ref|YP_007865287.1|	-	0.15	11.7	0.6	0.15	11.7	0.4	1.8	2	0	0	2	2	2	0	Photosystem	II	reaction	centre	X	protein	(PsbX)
DUF2970	PF11174.3	gi|479325232|ref|YP_007865287.1|	-	1.4	8.5	5.9	2.4	7.7	1.2	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2970)
LSR	PF05624.9	gi|479325232|ref|YP_007865287.1|	-	7.5	6.3	6.3	0.75	9.5	1.4	1.6	2	0	0	2	2	2	0	Lipolysis	stimulated	receptor	(LSR)
DUF3792	PF12670.2	gi|479325232|ref|YP_007865287.1|	-	9.1	6.1	11.8	61	3.5	8.2	2.0	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3792)
DUF4480	PF13715.1	gi|479325233|ref|YP_007865288.1|	-	0.0013	18.7	1.2	0.0049	16.8	0.0	2.6	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF4480)
CarboxypepD_reg	PF13620.1	gi|479325233|ref|YP_007865288.1|	-	0.0035	17.3	1.8	0.013	15.5	0.1	2.9	3	0	0	3	3	3	1	Carboxypeptidase	regulatory-like	domain
DUF4129	PF13559.1	gi|479325233|ref|YP_007865288.1|	-	0.17	11.8	0.0	0.28	11.1	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4129)
AAA_3	PF07726.6	gi|479325235|ref|YP_007865290.1|	-	1e-46	157.7	0.0	1.6e-46	157.1	0.0	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_5	PF07728.9	gi|479325235|ref|YP_007865290.1|	-	1.1e-12	47.7	0.0	2.1e-12	46.9	0.0	1.5	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
Mg_chelatase	PF01078.16	gi|479325235|ref|YP_007865290.1|	-	4.7e-07	29.1	0.0	0.0069	15.5	0.0	2.3	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AAA	PF00004.24	gi|479325235|ref|YP_007865290.1|	-	1.2e-06	28.7	0.0	2.1e-06	27.9	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sigma54_activat	PF00158.21	gi|479325235|ref|YP_007865290.1|	-	1.7e-06	27.5	0.0	6e-06	25.8	0.0	1.8	1	1	0	1	1	1	1	Sigma-54	interaction	domain
MCM	PF00493.18	gi|479325235|ref|YP_007865290.1|	-	3.2e-06	26.1	0.6	0.0082	14.9	0.0	3.0	2	1	0	2	2	2	2	MCM2/3/5	family
RuvB_N	PF05496.7	gi|479325235|ref|YP_007865290.1|	-	0.0046	16.0	0.1	0.04	12.9	0.1	2.1	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
DUF3798	PF12683.2	gi|479325235|ref|YP_007865290.1|	-	0.016	14.3	0.2	0.025	13.6	0.2	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3798)
KaiC	PF06745.8	gi|479325235|ref|YP_007865290.1|	-	0.034	13.2	1.6	4.7	6.2	0.1	2.2	2	0	0	2	2	2	0	KaiC
AAA_2	PF07724.9	gi|479325235|ref|YP_007865290.1|	-	0.035	14.0	0.0	0.19	11.6	0.0	2.2	2	1	0	2	2	2	0	AAA	domain	(Cdc48	subfamily)
T2SE	PF00437.15	gi|479325235|ref|YP_007865290.1|	-	0.054	12.3	0.2	0.1	11.4	0.1	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_14	PF13173.1	gi|479325235|ref|YP_007865290.1|	-	0.064	13.1	0.0	0.31	10.9	0.0	2.1	2	1	0	2	2	2	0	AAA	domain
AAA_16	PF13191.1	gi|479325235|ref|YP_007865290.1|	-	0.082	12.8	0.1	1.5	8.8	0.0	2.1	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_22	PF13401.1	gi|479325235|ref|YP_007865290.1|	-	0.11	12.6	0.1	0.35	11.0	0.1	1.9	1	1	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.12	gi|479325235|ref|YP_007865290.1|	-	0.13	11.6	0.0	0.26	10.7	0.0	1.4	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA_17	PF13207.1	gi|479325235|ref|YP_007865290.1|	-	0.19	12.5	1.6	1.6	9.5	1.1	2.5	1	1	0	1	1	1	0	AAA	domain
DUF58	PF01882.13	gi|479325236|ref|YP_007865291.1|	-	9.6e-10	38.4	0.0	1.6e-09	37.7	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF58
dTDP_sugar_isom	PF00908.12	gi|479325237|ref|YP_007865292.1|	-	5.3e-53	178.9	0.0	6.4e-53	178.6	0.0	1.0	1	0	0	1	1	1	1	dTDP-4-dehydrorhamnose	3,5-epimerase
Glyco_trans_1_4	PF13692.1	gi|479325238|ref|YP_007865293.1|	-	8e-20	71.3	0.0	1.7e-19	70.2	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|479325238|ref|YP_007865293.1|	-	0.00017	21.7	0.1	0.00094	19.4	0.0	2.2	3	0	0	3	3	3	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|479325238|ref|YP_007865293.1|	-	0.00018	21.2	0.0	0.00031	20.4	0.0	1.4	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_4_4	PF13579.1	gi|479325238|ref|YP_007865293.1|	-	0.0007	19.7	0.0	0.0033	17.5	0.0	1.9	1	1	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glycos_transf_1	PF00534.15	gi|479325238|ref|YP_007865293.1|	-	0.00072	19.0	0.3	0.0029	17.0	0.2	2.0	1	1	0	1	1	1	1	Glycosyl	transferases	group	1
Methyltransf_21	PF05050.7	gi|479325239|ref|YP_007865294.1|	-	0.0018	18.2	0.1	0.0028	17.5	0.1	1.3	1	0	0	1	1	1	1	Methyltransferase	FkbM	domain
NosD	PF05048.8	gi|479325239|ref|YP_007865294.1|	-	0.024	13.8	0.0	0.024	13.8	0.0	1.1	1	0	0	1	1	1	0	Periplasmic	copper-binding	protein	(NosD)
Ribosomal_L37	PF08561.5	gi|479325239|ref|YP_007865294.1|	-	0.037	13.5	0.0	0.066	12.7	0.0	1.4	1	0	0	1	1	1	0	Mitochondrial	ribosomal	protein	L37
Met_10	PF02475.11	gi|479325240|ref|YP_007865295.1|	-	8.5e-06	25.4	0.2	8.6e-06	25.4	0.1	1.1	1	0	0	1	1	1	1	Met-10+	like-protein
Cons_hypoth95	PF03602.10	gi|479325240|ref|YP_007865295.1|	-	0.021	14.2	0.0	0.023	14.1	0.0	1.1	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
Methyltransf_21	PF05050.7	gi|479325240|ref|YP_007865295.1|	-	0.024	14.6	0.0	0.024	14.6	0.0	1.1	1	0	0	1	1	1	0	Methyltransferase	FkbM	domain
DUF2154	PF09922.4	gi|479325241|ref|YP_007865296.1|	-	0.013	15.2	0.0	0.021	14.5	0.0	1.4	1	1	0	1	1	1	0	Cell	wall-active	antibiotics	response	protein	(DUF2154)
Polysacc_synt_C	PF14667.1	gi|479325245|ref|YP_007865300.1|	-	0.0014	18.4	9.2	0.0014	18.4	6.4	2.1	1	1	1	2	2	2	1	Polysaccharide	biosynthesis	C-terminal	domain
DUF4149	PF13664.1	gi|479325245|ref|YP_007865300.1|	-	0.43	10.6	11.9	1.9	8.5	5.7	2.8	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF4149)
DUF1240	PF06836.7	gi|479325245|ref|YP_007865300.1|	-	8.4	6.6	8.2	0.42	10.8	0.3	2.4	1	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1240)
K1	PF02960.9	gi|479325245|ref|YP_007865300.1|	-	9.7	6.2	6.4	5	7.1	0.9	2.1	1	1	1	2	2	2	0	K1	glycoprotein
Methyltransf_21	PF05050.7	gi|479325246|ref|YP_007865301.1|	-	1.4e-23	83.6	0.1	1.9e-23	83.2	0.1	1.2	1	0	0	1	1	1	1	Methyltransferase	FkbM	domain
Met_10	PF02475.11	gi|479325246|ref|YP_007865301.1|	-	1.8e-08	34.2	0.0	3e-08	33.4	0.0	1.5	1	1	0	1	1	1	1	Met-10+	like-protein
Methyltransf_18	PF12847.2	gi|479325246|ref|YP_007865301.1|	-	4.9e-08	33.5	0.0	7e-08	33.0	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|479325246|ref|YP_007865301.1|	-	0.0011	18.0	0.0	0.0046	16.0	0.0	1.8	2	0	0	2	2	2	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_23	PF13489.1	gi|479325246|ref|YP_007865301.1|	-	0.0013	18.5	0.0	0.0025	17.5	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
DREV	PF05219.7	gi|479325246|ref|YP_007865301.1|	-	0.0023	16.8	0.1	0.045	12.6	0.0	2.0	2	0	0	2	2	2	1	DREV	methyltransferase
Methyltransf_22	PF13383.1	gi|479325246|ref|YP_007865301.1|	-	0.0027	17.2	0.0	0.0033	16.9	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
tRNA_U5-meth_tr	PF05958.6	gi|479325246|ref|YP_007865301.1|	-	0.0037	15.9	0.1	0.0057	15.3	0.0	1.2	1	0	0	1	1	1	1	tRNA	(Uracil-5-)-methyltransferase
Methyltransf_31	PF13847.1	gi|479325246|ref|YP_007865301.1|	-	0.0051	16.4	0.0	0.0075	15.8	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_4	PF02390.12	gi|479325246|ref|YP_007865301.1|	-	0.0087	15.1	0.0	0.019	14.0	0.0	1.5	1	0	0	1	1	1	1	Putative	methyltransferase
V_cholerae_RfbT	PF05575.6	gi|479325246|ref|YP_007865301.1|	-	0.023	13.7	1.0	0.034	13.2	0.0	1.8	2	1	0	2	2	2	0	Vibrio	cholerae	RfbT	protein
Methyltransf_26	PF13659.1	gi|479325246|ref|YP_007865301.1|	-	0.036	14.1	0.0	0.04	13.9	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
MTS	PF05175.9	gi|479325246|ref|YP_007865301.1|	-	0.068	12.5	0.0	0.11	11.8	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	small	domain
Polysacc_synt	PF01943.12	gi|479325247|ref|YP_007865302.1|	-	3.2e-13	49.5	16.7	3.2e-13	49.5	11.6	2.7	1	1	2	3	3	3	1	Polysaccharide	biosynthesis	protein
Polysacc_synt_3	PF13440.1	gi|479325247|ref|YP_007865302.1|	-	1.6e-09	37.6	13.7	1.6e-09	37.6	9.5	2.2	1	1	1	2	2	2	1	Polysaccharide	biosynthesis	protein
Polysacc_synt_C	PF14667.1	gi|479325247|ref|YP_007865302.1|	-	1.6e-06	28.0	39.7	5e-06	26.3	9.8	3.2	1	1	2	3	3	3	2	Polysaccharide	biosynthesis	C-terminal	domain
Methyltransf_21	PF05050.7	gi|479325248|ref|YP_007865303.1|	-	0.0018	18.2	0.1	0.0028	17.5	0.1	1.3	1	0	0	1	1	1	1	Methyltransferase	FkbM	domain
NosD	PF05048.8	gi|479325248|ref|YP_007865303.1|	-	0.024	13.8	0.0	0.024	13.8	0.0	1.1	1	0	0	1	1	1	0	Periplasmic	copper-binding	protein	(NosD)
Ribosomal_L37	PF08561.5	gi|479325248|ref|YP_007865303.1|	-	0.037	13.5	0.0	0.066	12.7	0.0	1.4	1	0	0	1	1	1	0	Mitochondrial	ribosomal	protein	L37
Met_10	PF02475.11	gi|479325249|ref|YP_007865304.1|	-	8.5e-06	25.4	0.2	8.6e-06	25.4	0.1	1.1	1	0	0	1	1	1	1	Met-10+	like-protein
Cons_hypoth95	PF03602.10	gi|479325249|ref|YP_007865304.1|	-	0.021	14.2	0.0	0.023	14.1	0.0	1.1	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
Methyltransf_21	PF05050.7	gi|479325249|ref|YP_007865304.1|	-	0.024	14.6	0.0	0.024	14.6	0.0	1.1	1	0	0	1	1	1	0	Methyltransferase	FkbM	domain
DUF2154	PF09922.4	gi|479325250|ref|YP_007865305.1|	-	0.013	15.2	0.0	0.021	14.5	0.0	1.4	1	1	0	1	1	1	0	Cell	wall-active	antibiotics	response	protein	(DUF2154)
Polysacc_synt	PF01943.12	gi|479325251|ref|YP_007865306.1|	-	9.1e-14	51.3	30.1	9.1e-14	51.3	20.9	2.3	1	1	1	2	2	2	1	Polysaccharide	biosynthesis	protein
Polysacc_synt_3	PF13440.1	gi|479325251|ref|YP_007865306.1|	-	0.00011	21.8	26.6	0.00011	21.8	18.4	3.8	2	1	2	4	4	4	1	Polysaccharide	biosynthesis	protein
Methyltransf_21	PF05050.7	gi|479325252|ref|YP_007865307.1|	-	1.9e-17	63.6	0.3	2.5e-17	63.3	0.2	1.1	1	0	0	1	1	1	1	Methyltransferase	FkbM	domain
Methyltransf_18	PF12847.2	gi|479325252|ref|YP_007865307.1|	-	3.1e-06	27.7	0.0	8.1e-06	26.3	0.0	1.8	1	1	1	2	2	2	1	Methyltransferase	domain
Met_10	PF02475.11	gi|479325252|ref|YP_007865307.1|	-	4.1e-05	23.2	0.1	6.6e-05	22.5	0.1	1.3	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_22	PF13383.1	gi|479325252|ref|YP_007865307.1|	-	0.0051	16.3	0.1	0.0097	15.4	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|479325252|ref|YP_007865307.1|	-	0.063	12.6	0.0	0.092	12.1	0.0	1.2	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
PrmA	PF06325.8	gi|479325252|ref|YP_007865307.1|	-	0.083	11.9	0.0	0.12	11.4	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
Glycos_transf_2	PF00535.21	gi|479325253|ref|YP_007865308.1|	-	1e-15	57.8	3.2	2.1e-15	56.8	2.2	1.6	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|479325253|ref|YP_007865308.1|	-	4.4e-08	33.2	0.0	6.4e-08	32.6	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glycos_transf_1	PF00534.15	gi|479325254|ref|YP_007865309.1|	-	9.7e-29	99.9	0.0	2e-28	98.9	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|479325254|ref|YP_007865309.1|	-	5.3e-11	42.8	0.0	1e-10	41.8	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|479325254|ref|YP_007865309.1|	-	3.6e-07	30.0	0.1	2.5e-05	24.0	0.1	2.4	1	1	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_1_2	PF13524.1	gi|479325254|ref|YP_007865309.1|	-	5.8e-07	29.7	0.0	1e-06	28.9	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_2	PF13477.1	gi|479325254|ref|YP_007865309.1|	-	0.00099	18.9	0.6	0.004	17.0	0.2	2.1	1	1	0	1	1	1	1	Glycosyl	transferase	4-like
Glycos_transf_2	PF00535.21	gi|479325255|ref|YP_007865310.1|	-	2.7e-14	53.1	0.4	4.6e-14	52.4	0.3	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_5	PF13712.1	gi|479325255|ref|YP_007865310.1|	-	1.1e-05	24.7	0.1	2.8e-05	23.4	0.1	1.6	2	0	0	2	2	2	1	Glycosyltransferase	like	family
Glycos_transf_2	PF00535.21	gi|479325256|ref|YP_007865311.1|	-	1.1e-05	25.1	0.0	1.2e-05	25.0	0.0	1.1	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_5	PF13712.1	gi|479325256|ref|YP_007865311.1|	-	0.031	13.5	0.0	0.034	13.3	0.0	1.1	1	0	0	1	1	1	0	Glycosyltransferase	like	family
SKI	PF01202.17	gi|479325256|ref|YP_007865311.1|	-	0.086	12.7	0.1	0.098	12.5	0.1	1.2	1	0	0	1	1	1	0	Shikimate	kinase
DUF3367	PF11847.3	gi|479325260|ref|YP_007865315.1|	-	0.44	8.4	0.0	0.44	8.4	0.0	1.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3367)
Glycos_transf_2	PF00535.21	gi|479325262|ref|YP_007865317.1|	-	9.8e-08	31.8	0.0	1.2e-05	25.0	0.0	2.3	2	0	0	2	2	2	2	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|479325262|ref|YP_007865317.1|	-	0.03	14.1	0.0	2.3	7.9	0.0	2.1	2	0	0	2	2	2	0	Glycosyltransferase	like	family	2
Glyco_trans_1_4	PF13692.1	gi|479325263|ref|YP_007865318.1|	-	7.3e-11	42.3	0.0	1.3e-10	41.5	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glycos_transf_1	PF00534.15	gi|479325263|ref|YP_007865318.1|	-	8.8e-11	41.5	0.2	4.2e-10	39.3	0.1	2.1	1	1	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|479325263|ref|YP_007865318.1|	-	0.013	15.7	0.1	0.14	12.4	0.0	2.4	2	1	1	3	3	3	0	Glycosyl	transferases	group	1
Methyltransf_21	PF05050.7	gi|479325266|ref|YP_007865321.1|	-	2.3e-15	56.9	0.1	3.7e-15	56.2	0.1	1.3	1	0	0	1	1	1	1	Methyltransferase	FkbM	domain
Methyltransf_23	PF13489.1	gi|479325267|ref|YP_007865322.1|	-	5.4e-20	71.7	0.0	7.9e-20	71.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|479325267|ref|YP_007865322.1|	-	5.7e-13	49.1	0.0	4.8e-12	46.2	0.0	2.0	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|479325267|ref|YP_007865322.1|	-	2.4e-11	43.4	0.1	3.8e-11	42.8	0.1	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|479325267|ref|YP_007865322.1|	-	1.5e-09	38.1	0.1	4.2e-09	36.7	0.0	1.8	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|479325267|ref|YP_007865322.1|	-	8.1e-05	23.1	0.4	0.00039	20.9	0.3	2.0	1	1	0	1	1	1	1	Methyltransferase	domain
MetW	PF07021.7	gi|479325267|ref|YP_007865322.1|	-	0.0009	18.6	0.0	0.0013	18.0	0.0	1.4	1	1	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
Methyltransf_25	PF13649.1	gi|479325267|ref|YP_007865322.1|	-	0.0034	17.7	0.0	0.0058	16.9	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|479325267|ref|YP_007865322.1|	-	0.0041	17.1	0.0	0.018	15.0	0.0	2.0	1	1	0	1	1	1	1	Methyltransferase	domain
NodS	PF05401.6	gi|479325267|ref|YP_007865322.1|	-	0.0044	16.4	0.0	0.0063	15.9	0.0	1.2	1	0	0	1	1	1	1	Nodulation	protein	S	(NodS)
Methyltransf_2	PF00891.13	gi|479325267|ref|YP_007865322.1|	-	0.0089	15.2	0.0	0.011	14.9	0.0	1.2	1	0	0	1	1	1	1	O-methyltransferase
NEP	PF10167.4	gi|479325267|ref|YP_007865322.1|	-	0.021	14.5	0.0	0.041	13.5	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	conserved	protein
Ubie_methyltran	PF01209.13	gi|479325267|ref|YP_007865322.1|	-	0.028	13.5	0.1	0.092	11.8	0.1	1.8	1	1	0	1	1	1	0	ubiE/COQ5	methyltransferase	family
FtsJ	PF01728.14	gi|479325267|ref|YP_007865322.1|	-	0.12	12.2	0.0	0.21	11.5	0.0	1.3	1	0	0	1	1	1	0	FtsJ-like	methyltransferase
Glycos_transf_2	PF00535.21	gi|479325268|ref|YP_007865323.1|	-	1.3e-34	119.3	0.1	2e-34	118.7	0.1	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|479325268|ref|YP_007865323.1|	-	8e-21	74.8	0.0	1.1e-20	74.4	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.4	gi|479325268|ref|YP_007865323.1|	-	5.4e-15	55.2	0.5	6.8e-15	54.8	0.1	1.4	2	0	0	2	2	2	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.1	gi|479325268|ref|YP_007865323.1|	-	6.8e-06	26.3	0.0	1.8e-05	24.9	0.0	1.8	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_trans_2_3	PF13632.1	gi|479325268|ref|YP_007865323.1|	-	0.00011	22.0	0.0	0.00016	21.4	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_tranf_2_5	PF13712.1	gi|479325268|ref|YP_007865323.1|	-	0.00016	20.9	0.0	0.00035	19.8	0.0	1.5	1	1	0	1	1	1	1	Glycosyltransferase	like	family
Glyco_transf_21	PF13506.1	gi|479325268|ref|YP_007865323.1|	-	0.0011	18.3	0.0	0.0023	17.2	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_transf_64	PF09258.5	gi|479325268|ref|YP_007865323.1|	-	0.015	14.4	0.1	0.021	14.0	0.1	1.2	1	0	0	1	1	1	0	Glycosyl	transferase	family	64	domain
RGP	PF03214.8	gi|479325268|ref|YP_007865323.1|	-	0.083	11.6	0.2	0.23	10.1	0.2	1.7	1	1	0	1	1	1	0	Reversibly	glycosylated	polypeptide
dTDP_sugar_isom	PF00908.12	gi|479325269|ref|YP_007865324.1|	-	1.9e-54	183.6	0.0	2.3e-54	183.4	0.0	1.0	1	0	0	1	1	1	1	dTDP-4-dehydrorhamnose	3,5-epimerase
FdtA	PF05523.6	gi|479325269|ref|YP_007865324.1|	-	0.066	12.7	0.0	0.089	12.3	0.0	1.2	1	0	0	1	1	1	0	WxcM-like,	C-terminal
RmlD_sub_bind	PF04321.12	gi|479325270|ref|YP_007865325.1|	-	5.8e-65	219.0	0.0	6.4e-65	218.8	0.0	1.0	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Epimerase	PF01370.16	gi|479325270|ref|YP_007865325.1|	-	4.4e-19	68.8	0.0	6.2e-19	68.3	0.0	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
NAD_binding_4	PF07993.7	gi|479325270|ref|YP_007865325.1|	-	2.5e-06	26.5	0.1	9.8e-06	24.6	0.0	1.8	2	0	0	2	2	2	1	Male	sterility	protein
Polysacc_synt_2	PF02719.10	gi|479325270|ref|YP_007865325.1|	-	5e-06	25.6	1.9	9.9e-05	21.3	0.1	2.6	1	1	1	2	2	2	1	Polysaccharide	biosynthesis	protein
NAD_binding_10	PF13460.1	gi|479325270|ref|YP_007865325.1|	-	0.022	14.7	0.0	0.036	14.0	0.0	1.4	1	0	0	1	1	1	0	NADH(P)-binding
Rep_2	PF01719.12	gi|479325270|ref|YP_007865325.1|	-	0.053	13.0	0.1	2.1	7.8	0.0	2.3	2	1	0	2	2	2	0	Plasmid	replication	protein
NTP_transferase	PF00483.18	gi|479325271|ref|YP_007865326.1|	-	1.4e-53	181.7	0.0	1.8e-53	181.4	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|479325271|ref|YP_007865326.1|	-	4.1e-10	39.9	0.0	5.8e-10	39.4	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep	PF00132.19	gi|479325271|ref|YP_007865326.1|	-	1.7e-05	24.1	4.9	0.16	11.5	0.0	4.9	3	2	1	4	4	4	2	Bacterial	transferase	hexapeptide	(six	repeats)
Hexapep_2	PF14602.1	gi|479325271|ref|YP_007865326.1|	-	0.004	16.6	5.7	0.035	13.6	0.0	4.1	4	1	0	4	4	4	1	Hexapeptide	repeat	of	succinyl-transferase
IspD	PF01128.14	gi|479325271|ref|YP_007865326.1|	-	0.0058	16.1	0.0	0.011	15.2	0.0	1.5	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
Fucokinase	PF07959.7	gi|479325271|ref|YP_007865326.1|	-	0.022	13.3	0.2	0.037	12.5	0.2	1.3	1	0	0	1	1	1	0	L-fucokinase
CTP_transf_3	PF02348.14	gi|479325271|ref|YP_007865326.1|	-	0.051	13.1	0.0	0.083	12.5	0.0	1.2	1	0	0	1	1	1	0	Cytidylyltransferase
Epimerase	PF01370.16	gi|479325272|ref|YP_007865327.1|	-	7e-61	205.6	0.0	8.4e-61	205.4	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|479325272|ref|YP_007865327.1|	-	4.8e-19	68.3	0.0	6.7e-19	67.8	0.0	1.2	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
3Beta_HSD	PF01073.14	gi|479325272|ref|YP_007865327.1|	-	9.9e-17	60.5	0.0	1.2e-16	60.2	0.0	1.2	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
NAD_binding_10	PF13460.1	gi|479325272|ref|YP_007865327.1|	-	3.1e-13	50.1	0.0	3.8e-13	49.8	0.0	1.1	1	0	0	1	1	1	1	NADH(P)-binding
NAD_binding_4	PF07993.7	gi|479325272|ref|YP_007865327.1|	-	9.6e-13	47.6	0.5	6.6e-11	41.6	0.0	2.2	1	1	0	2	2	2	1	Male	sterility	protein
Polysacc_synt_2	PF02719.10	gi|479325272|ref|YP_007865327.1|	-	2.6e-11	42.9	0.0	6.8e-11	41.6	0.0	1.7	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NmrA	PF05368.8	gi|479325272|ref|YP_007865327.1|	-	6.6e-07	28.8	0.3	0.00041	19.6	0.1	2.1	2	0	0	2	2	2	2	NmrA-like	family
Ldh_1_N	PF00056.18	gi|479325272|ref|YP_007865327.1|	-	0.00019	21.2	0.1	0.00032	20.5	0.1	1.3	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	NAD	binding	domain
Saccharop_dh	PF03435.13	gi|479325272|ref|YP_007865327.1|	-	0.00019	20.5	0.2	0.0003	19.8	0.1	1.3	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
adh_short	PF00106.20	gi|479325272|ref|YP_007865327.1|	-	0.017	15.0	1.0	0.042	13.7	0.0	2.0	2	0	0	2	2	2	0	short	chain	dehydrogenase
NAD_binding_3	PF03447.11	gi|479325272|ref|YP_007865327.1|	-	0.11	12.8	0.1	0.18	12.1	0.0	1.3	1	0	0	1	1	1	0	Homoserine	dehydrogenase,	NAD	binding	domain
FTR1	PF03239.9	gi|479325273|ref|YP_007865328.1|	-	0.027	13.4	2.9	0.03	13.2	2.0	1.0	1	0	0	1	1	1	0	Iron	permease	FTR1	family
DUF3165	PF11364.3	gi|479325273|ref|YP_007865328.1|	-	0.074	13.1	1.6	0.092	12.8	1.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3165)
SdpI	PF13630.1	gi|479325273|ref|YP_007865328.1|	-	1.4	8.7	4.7	1.7	8.4	3.3	1.1	1	0	0	1	1	1	0	SdpI/YhfL	protein	family
DUF4116	PF13475.1	gi|479325274|ref|YP_007865329.1|	-	0.48	9.9	4.0	1.9	8.0	0.0	3.2	3	1	0	3	3	3	0	Domain	of	unknown	function	(DUF4116)
AAA_21	PF13304.1	gi|479325275|ref|YP_007865330.1|	-	1.4e-12	48.2	7.3	1.4e-12	48.2	5.1	2.9	2	2	0	2	2	2	1	AAA	domain
AAA_15	PF13175.1	gi|479325275|ref|YP_007865330.1|	-	7.1e-12	45.0	8.0	1.2e-07	31.1	2.5	2.2	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|479325275|ref|YP_007865330.1|	-	3.8e-08	33.9	1.1	5e-08	33.5	0.8	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|479325275|ref|YP_007865330.1|	-	0.00031	20.8	0.0	0.0036	17.4	0.0	2.1	1	1	0	1	1	1	1	AAA	domain
ABC_tran	PF00005.22	gi|479325275|ref|YP_007865330.1|	-	0.00086	19.6	0.0	0.0017	18.6	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
SMC_N	PF02463.14	gi|479325275|ref|YP_007865330.1|	-	0.0026	17.0	1.3	0.0065	15.7	0.9	1.8	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
Arch_ATPase	PF01637.13	gi|479325275|ref|YP_007865330.1|	-	0.0054	16.4	1.8	0.026	14.2	1.2	2.0	1	1	0	1	1	1	1	Archaeal	ATPase
MMR_HSR1	PF01926.18	gi|479325275|ref|YP_007865330.1|	-	0.0055	16.6	0.4	0.016	15.1	0.3	2.0	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
DUF2813	PF11398.3	gi|479325275|ref|YP_007865330.1|	-	0.0067	15.5	0.0	0.63	9.0	0.0	2.3	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2813)
Miro	PF08477.8	gi|479325275|ref|YP_007865330.1|	-	0.011	16.1	0.0	0.022	15.2	0.0	1.5	1	0	0	1	1	1	0	Miro-like	protein
DUF258	PF03193.11	gi|479325275|ref|YP_007865330.1|	-	0.016	14.4	0.0	0.076	12.2	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF258
AAA_14	PF13173.1	gi|479325275|ref|YP_007865330.1|	-	0.06	13.2	1.3	6.6	6.6	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
AAA_29	PF13555.1	gi|479325275|ref|YP_007865330.1|	-	0.097	12.2	0.0	0.22	11.1	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
Glycos_transf_2	PF00535.21	gi|479325276|ref|YP_007865331.1|	-	3.7e-06	26.7	0.0	5.6e-06	26.1	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
AA_kinase	PF00696.23	gi|479325276|ref|YP_007865331.1|	-	0.0092	15.5	0.0	0.012	15.1	0.0	1.2	1	0	0	1	1	1	1	Amino	acid	kinase	family
PRANC	PF09372.5	gi|479325278|ref|YP_007865333.1|	-	0.34	10.9	4.1	0.15	12.0	1.0	1.7	2	0	0	2	2	2	0	PRANC	domain
AAA_21	PF13304.1	gi|479325283|ref|YP_007865338.1|	-	6.7e-24	85.3	22.3	1e-23	84.7	15.5	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|479325283|ref|YP_007865338.1|	-	1.7e-23	83.3	27.2	8.3e-14	51.4	14.2	2.1	1	1	1	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|479325283|ref|YP_007865338.1|	-	9.9e-07	28.1	6.7	1e-06	28.1	2.8	2.3	2	1	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|479325283|ref|YP_007865338.1|	-	2e-06	28.2	24.8	3.3e-06	27.5	15.2	2.3	2	1	0	2	2	2	1	AAA	domain
DUF2813	PF11398.3	gi|479325283|ref|YP_007865338.1|	-	3.3e-05	23.1	0.5	0.00079	18.6	0.3	2.3	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF2813)
AAA_29	PF13555.1	gi|479325283|ref|YP_007865338.1|	-	0.0018	17.7	0.0	0.0036	16.7	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
NB-ARC	PF00931.17	gi|479325283|ref|YP_007865338.1|	-	0.0037	16.1	0.0	0.01	14.7	0.0	1.7	2	0	0	2	2	2	1	NB-ARC	domain
AAA_13	PF13166.1	gi|479325283|ref|YP_007865338.1|	-	0.0038	15.7	18.7	0.051	12.0	0.1	3.0	2	1	1	3	3	3	2	AAA	domain
MMR_HSR1	PF01926.18	gi|479325283|ref|YP_007865338.1|	-	0.02	14.8	1.1	0.064	13.2	0.8	2.0	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
ABC_tran	PF00005.22	gi|479325283|ref|YP_007865338.1|	-	0.03	14.6	2.4	0.052	13.8	1.6	1.5	1	1	0	1	1	1	0	ABC	transporter
SusE	PF14292.1	gi|479325283|ref|YP_007865338.1|	-	0.72	9.6	2.9	0.75	9.6	0.1	2.1	2	0	0	2	2	2	0	SusE	outer	membrane	protein
Y1_Tnp	PF01797.11	gi|479325284|ref|YP_007865339.1|	-	3.3e-41	139.9	0.0	3.7e-41	139.7	0.0	1.0	1	0	0	1	1	1	1	Transposase	IS200	like
RCC_reductase	PF06405.6	gi|479325284|ref|YP_007865339.1|	-	0.0058	15.6	0.0	0.0086	15.0	0.0	1.2	1	1	0	1	1	1	1	Red	chlorophyll	catabolite	reductase	(RCC	reductase)
HTH_3	PF01381.17	gi|479325284|ref|YP_007865339.1|	-	0.15	11.8	0.3	19	5.1	0.0	2.6	3	0	0	3	3	3	0	Helix-turn-helix
OrfB_IS605	PF01385.14	gi|479325285|ref|YP_007865340.1|	-	1.3e-75	253.7	6.6	1.8e-75	253.2	4.5	1.2	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.6	gi|479325285|ref|YP_007865340.1|	-	3.4e-19	68.2	0.0	8.2e-19	67.0	0.0	1.7	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
UPF0081	PF03652.10	gi|479325285|ref|YP_007865340.1|	-	6.5e-05	23.0	0.0	0.00017	21.7	0.0	1.7	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0081)
PIN	PF01850.16	gi|479325288|ref|YP_007865343.1|	-	0.00012	22.4	0.1	0.00013	22.2	0.1	1.2	1	0	0	1	1	1	1	PIN	domain
RICTOR_M	PF14666.1	gi|479325288|ref|YP_007865343.1|	-	0.014	14.4	0.0	0.015	14.3	0.0	1.2	1	0	0	1	1	1	0	Rapamycin-insensitive	companion	of	mTOR,	middle	domain
Vps16_C	PF04840.7	gi|479325288|ref|YP_007865343.1|	-	0.043	12.7	0.7	0.047	12.6	0.5	1.0	1	0	0	1	1	1	0	Vps16,	C-terminal	region
PaREP1	PF05942.6	gi|479325289|ref|YP_007865344.1|	-	7.3e-33	112.8	4.9	9.7e-33	112.4	3.4	1.2	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
DUF357	PF04010.8	gi|479325289|ref|YP_007865344.1|	-	0.00029	20.4	0.1	0.0011	18.5	0.1	2.0	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF357)
Telomere_reg-2	PF10193.4	gi|479325289|ref|YP_007865344.1|	-	0.028	14.6	1.2	0.071	13.3	0.2	2.0	2	0	0	2	2	2	0	Telomere	length	regulation	protein
Plasmid_stabil	PF05016.9	gi|479325289|ref|YP_007865344.1|	-	0.13	12.6	0.2	0.23	11.8	0.1	1.4	1	0	0	1	1	1	0	Plasmid	stabilisation	system	protein
PhosphMutase	PF10143.4	gi|479325289|ref|YP_007865344.1|	-	0.15	11.7	0.4	0.99	9.0	0.0	2.1	1	1	1	2	2	2	0	2,3-bisphosphoglycerate-independent	phosphoglycerate	mutase
DUF2262	PF10020.4	gi|479325289|ref|YP_007865344.1|	-	0.72	10.0	5.5	1.1	9.4	3.0	1.7	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2262)
Cas_APE2256	PF09651.5	gi|479325290|ref|YP_007865345.1|	-	7.8e-36	122.7	0.6	1.5e-35	121.8	0.4	1.5	1	0	0	1	1	1	1	CRISPR-associated	protein	(Cas_APE2256)
DSPc	PF00782.15	gi|479325290|ref|YP_007865345.1|	-	0.0011	18.5	0.2	0.11	12.0	0.0	3.2	2	1	1	3	3	3	1	Dual	specificity	phosphatase,	catalytic	domain
DUF3139	PF11337.3	gi|479325290|ref|YP_007865345.1|	-	0.004	17.4	4.3	0.015	15.5	1.0	2.6	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF3139)
Cas_Cas02710	PF09670.5	gi|479325290|ref|YP_007865345.1|	-	0.0053	15.4	0.0	0.0094	14.6	0.0	1.4	1	0	0	1	1	1	1	CRISPR-associated	protein	(Cas_Cas02710)
DUF1680	PF07944.7	gi|479325290|ref|YP_007865345.1|	-	0.09	11.0	0.2	0.56	8.4	0.0	2.0	2	0	0	2	2	2	0	Putative	glycosyl	hydrolase	of	unknown	function	(DUF1680)
RVP	PF00077.15	gi|479325291|ref|YP_007865346.1|	-	4.4e-05	23.3	0.0	5.3e-05	23.0	0.0	1.0	1	0	0	1	1	1	1	Retroviral	aspartyl	protease
Asp_protease_2	PF13650.1	gi|479325291|ref|YP_007865346.1|	-	0.042	14.3	0.0	0.047	14.1	0.0	1.2	1	0	0	1	1	1	0	Aspartyl	protease
PIN_4	PF13638.1	gi|479325292|ref|YP_007865347.1|	-	0.00038	20.5	0.1	0.00097	19.2	0.0	1.6	1	1	0	1	1	1	1	PIN	domain
HTH_10	PF04967.7	gi|479325294|ref|YP_007865349.1|	-	3.2e-23	81.0	0.1	5.8e-23	80.2	0.0	1.4	1	0	0	1	1	1	1	HTH	DNA	binding	domain
GerE	PF00196.14	gi|479325294|ref|YP_007865349.1|	-	0.076	12.3	0.4	1.1	8.6	0.1	2.2	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
AA_permease_2	PF13520.1	gi|479325295|ref|YP_007865350.1|	-	9.2e-29	100.2	63.4	1.3e-28	99.7	44.0	1.2	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|479325295|ref|YP_007865350.1|	-	1e-22	80.1	59.7	1.4e-22	79.7	41.4	1.1	1	0	0	1	1	1	1	Amino	acid	permease
Tospo_nucleocap	PF01533.11	gi|479325295|ref|YP_007865350.1|	-	0.032	13.4	1.2	0.042	13.0	0.0	1.7	2	0	0	2	2	2	0	Tospovirus	nucleocapsid	protein
FAD_binding_4	PF01565.18	gi|479325296|ref|YP_007865351.1|	-	4.1e-27	94.3	0.0	9.4e-27	93.1	0.0	1.6	2	0	0	2	2	2	1	FAD	binding	domain
FAD-oxidase_C	PF02913.14	gi|479325296|ref|YP_007865351.1|	-	6.1e-05	22.4	0.1	0.00012	21.5	0.0	1.5	1	0	0	1	1	1	1	FAD	linked	oxidases,	C-terminal	domain
Radical_SAM	PF04055.16	gi|479325296|ref|YP_007865351.1|	-	0.037	14.2	0.5	0.49	10.5	0.1	2.5	3	0	0	3	3	3	0	Radical	SAM	superfamily
Nitr_red_bet_C	PF14711.1	gi|479325296|ref|YP_007865351.1|	-	0.093	12.2	0.1	3.4	7.2	0.0	2.6	2	0	0	2	2	2	0	Respiratory	nitrate	reductase	beta	C-terminal
DUF1177	PF06675.6	gi|479325297|ref|YP_007865352.1|	-	8.4e-112	372.2	0.1	1e-111	371.9	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1177)
Peptidase_M20	PF01546.23	gi|479325298|ref|YP_007865353.1|	-	2.8e-29	101.9	0.0	3.6e-29	101.6	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|479325298|ref|YP_007865353.1|	-	8.3e-12	44.8	0.1	1.8e-11	43.7	0.1	1.5	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
YTV	PF07639.6	gi|479325299|ref|YP_007865354.1|	-	0.019	14.6	2.8	0.028	14.1	1.9	1.3	1	0	0	1	1	1	0	YTV
DUF1286	PF06939.6	gi|479325300|ref|YP_007865355.1|	-	4.6e-49	165.3	8.6	4.6e-49	165.3	5.9	1.5	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1286)
DUF3084	PF11283.3	gi|479325300|ref|YP_007865355.1|	-	0.17	11.7	0.1	0.17	11.7	0.1	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3084)
DUF912	PF06024.7	gi|479325300|ref|YP_007865355.1|	-	0.18	11.8	3.5	0.1	12.6	1.0	1.7	2	0	0	2	2	2	0	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF912)
DUF457	PF04307.9	gi|479325300|ref|YP_007865355.1|	-	0.32	10.3	14.5	2	7.7	10.0	2.0	1	1	0	1	1	1	0	Predicted	membrane-bound	metal-dependent	hydrolase	(DUF457)
Adeno_E3_CR2	PF02439.10	gi|479325300|ref|YP_007865355.1|	-	5	6.7	11.3	0.14	11.6	0.7	2.9	3	0	0	3	3	3	0	Adenovirus	E3	region	protein	CR2
ABC_tran	PF00005.22	gi|479325302|ref|YP_007865357.1|	-	2.8e-29	102.1	0.0	9.1e-29	100.4	0.0	1.7	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|479325302|ref|YP_007865357.1|	-	2.2e-13	50.8	2.2	2.9e-06	27.4	0.0	2.5	2	1	1	3	3	3	2	AAA	domain
AAA_15	PF13175.1	gi|479325302|ref|YP_007865357.1|	-	6e-09	35.4	0.9	0.004	16.2	0.0	3.0	1	1	2	3	3	3	2	AAA	ATPase	domain
AAA_29	PF13555.1	gi|479325302|ref|YP_007865357.1|	-	6.9e-05	22.2	0.0	0.00012	21.5	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_10	PF12846.2	gi|479325302|ref|YP_007865357.1|	-	0.00026	20.5	0.1	0.083	12.3	0.0	2.2	2	0	0	2	2	2	1	AAA-like	domain
AAA	PF00004.24	gi|479325302|ref|YP_007865357.1|	-	0.0016	18.6	0.9	0.016	15.4	0.5	2.3	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_23	PF13476.1	gi|479325302|ref|YP_007865357.1|	-	0.0025	18.1	2.0	0.0062	16.8	1.4	1.8	1	1	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|479325302|ref|YP_007865357.1|	-	0.0026	16.9	0.0	0.0052	15.9	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
UPF0079	PF02367.12	gi|479325302|ref|YP_007865357.1|	-	0.0028	17.3	0.1	0.0056	16.3	0.0	1.5	1	0	0	1	1	1	1	Uncharacterised	P-loop	hydrolase	UPF0079
MobB	PF03205.9	gi|479325302|ref|YP_007865357.1|	-	0.0077	15.9	0.0	0.02	14.6	0.0	1.7	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_16	PF13191.1	gi|479325302|ref|YP_007865357.1|	-	0.0095	15.9	0.0	0.017	15.1	0.0	1.5	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|479325302|ref|YP_007865357.1|	-	0.011	15.9	0.1	0.065	13.3	0.0	2.1	2	1	0	2	2	2	0	AAA	domain
MMR_HSR1	PF01926.18	gi|479325302|ref|YP_007865357.1|	-	0.011	15.7	0.1	0.029	14.3	0.1	2.0	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
Zeta_toxin	PF06414.7	gi|479325302|ref|YP_007865357.1|	-	0.014	14.4	0.0	0.025	13.6	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
SMC_N	PF02463.14	gi|479325302|ref|YP_007865357.1|	-	0.015	14.5	0.3	0.18	10.9	0.0	2.3	2	0	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
AAA_19	PF13245.1	gi|479325302|ref|YP_007865357.1|	-	0.025	14.3	0.0	0.11	12.2	0.0	2.0	3	0	0	3	3	3	0	Part	of	AAA	domain
AAA_5	PF07728.9	gi|479325302|ref|YP_007865357.1|	-	0.027	14.2	0.6	0.23	11.1	0.0	2.4	3	0	0	3	3	2	0	AAA	domain	(dynein-related	subfamily)
AAA_33	PF13671.1	gi|479325302|ref|YP_007865357.1|	-	0.048	13.5	0.0	0.13	12.1	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
NACHT	PF05729.7	gi|479325302|ref|YP_007865357.1|	-	0.048	13.3	0.0	0.29	10.7	0.0	2.2	3	0	0	3	3	3	0	NACHT	domain
NTPase_1	PF03266.10	gi|479325302|ref|YP_007865357.1|	-	0.05	13.3	1.9	3.2	7.4	0.0	2.8	3	0	0	3	3	3	0	NTPase
AAA_17	PF13207.1	gi|479325302|ref|YP_007865357.1|	-	0.064	14.0	3.0	0.57	11.0	0.2	2.5	1	1	1	2	2	2	0	AAA	domain
AAA_11	PF13086.1	gi|479325302|ref|YP_007865357.1|	-	0.07	12.6	0.0	0.084	12.4	0.0	1.1	1	0	0	1	1	1	0	AAA	domain
cobW	PF02492.14	gi|479325302|ref|YP_007865357.1|	-	0.074	12.4	0.0	0.16	11.3	0.0	1.5	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_14	PF13173.1	gi|479325302|ref|YP_007865357.1|	-	0.075	12.9	0.9	1.6	8.6	0.0	2.9	1	1	3	4	4	4	0	AAA	domain
AAA_30	PF13604.1	gi|479325302|ref|YP_007865357.1|	-	0.086	12.4	0.0	0.18	11.3	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
SRP54	PF00448.17	gi|479325302|ref|YP_007865357.1|	-	0.086	12.2	0.0	0.16	11.3	0.0	1.4	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
Miro	PF08477.8	gi|479325302|ref|YP_007865357.1|	-	0.086	13.3	0.0	0.29	11.6	0.0	1.8	2	0	0	2	2	1	0	Miro-like	protein
DUF4162	PF13732.1	gi|479325302|ref|YP_007865357.1|	-	0.11	12.9	0.6	0.28	11.7	0.1	2.0	2	0	0	2	2	1	0	Domain	of	unknown	function	(DUF4162)
AAA_28	PF13521.1	gi|479325302|ref|YP_007865357.1|	-	0.14	12.1	0.0	0.28	11.1	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_18	PF13238.1	gi|479325302|ref|YP_007865357.1|	-	0.88	9.8	4.9	17	5.6	3.4	2.8	1	1	0	1	1	1	0	AAA	domain
ABC2_membrane_2	PF12679.2	gi|479325303|ref|YP_007865358.1|	-	7.7e-14	51.2	30.5	1.9e-13	49.9	21.1	1.6	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|479325303|ref|YP_007865358.1|	-	1.4e-11	43.9	36.2	1.9e-11	43.5	24.9	1.3	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_3	PF12698.2	gi|479325303|ref|YP_007865358.1|	-	1.4e-06	27.6	32.4	1.4e-06	27.6	22.4	1.4	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_5	PF13346.1	gi|479325303|ref|YP_007865358.1|	-	2.8	7.1	34.7	1.6	7.9	21.4	2.4	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
HTH_34	PF13601.1	gi|479325304|ref|YP_007865359.1|	-	3.4e-09	36.5	0.0	4e-09	36.3	0.0	1.0	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
DUF2513	PF10711.4	gi|479325304|ref|YP_007865359.1|	-	8.2e-06	25.8	0.0	1e-05	25.5	0.0	1.0	1	0	0	1	1	1	1	Hypothetical	protein	(DUF2513)
HTH_5	PF01022.15	gi|479325304|ref|YP_007865359.1|	-	0.00023	20.7	0.0	0.00031	20.3	0.0	1.2	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|479325304|ref|YP_007865359.1|	-	0.00095	18.9	0.0	0.0012	18.5	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|479325304|ref|YP_007865359.1|	-	0.0046	16.6	0.0	0.012	15.3	0.0	1.6	1	1	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
PadR	PF03551.9	gi|479325304|ref|YP_007865359.1|	-	0.012	15.3	0.0	0.014	15.1	0.0	1.1	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
HTH_IclR	PF09339.5	gi|479325304|ref|YP_007865359.1|	-	0.02	14.4	0.0	0.027	14.0	0.0	1.1	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
MarR_2	PF12802.2	gi|479325304|ref|YP_007865359.1|	-	0.033	13.8	0.0	0.042	13.5	0.0	1.2	1	0	0	1	1	1	0	MarR	family
HTH_45	PF14947.1	gi|479325304|ref|YP_007865359.1|	-	0.055	13.2	0.9	0.091	12.5	0.6	1.5	1	1	0	1	1	1	0	Winged	helix-turn-helix
HxlR	PF01638.12	gi|479325304|ref|YP_007865359.1|	-	0.11	12.1	0.0	0.11	12.0	0.0	1.1	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
S10_plectin	PF03501.10	gi|479325304|ref|YP_007865359.1|	-	0.13	12.1	0.0	0.72	9.7	0.0	1.8	1	1	0	1	1	1	0	Plectin/S10	domain
ABC_tran	PF00005.22	gi|479325306|ref|YP_007865361.1|	-	3e-14	53.4	0.0	5.2e-14	52.6	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|479325306|ref|YP_007865361.1|	-	7.5e-12	45.7	2.4	9.1e-10	38.9	1.3	2.4	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|479325306|ref|YP_007865361.1|	-	6.7e-08	32.0	0.1	0.011	14.9	0.0	2.3	2	1	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|479325306|ref|YP_007865361.1|	-	1.1e-07	32.3	3.3	2.1e-07	31.4	2.2	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|479325306|ref|YP_007865361.1|	-	3.4e-06	26.4	0.1	8.3e-06	25.2	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.1	gi|479325306|ref|YP_007865361.1|	-	0.00013	21.2	1.1	0.24	10.4	0.1	2.3	1	1	1	2	2	2	2	AAA	ATPase	domain
Arch_ATPase	PF01637.13	gi|479325306|ref|YP_007865361.1|	-	0.00027	20.7	0.2	0.00042	20.0	0.2	1.3	1	0	0	1	1	1	1	Archaeal	ATPase
AAA	PF00004.24	gi|479325306|ref|YP_007865361.1|	-	0.00074	19.7	0.0	0.0012	19.0	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_14	PF13173.1	gi|479325306|ref|YP_007865361.1|	-	0.0032	17.3	0.1	0.0059	16.4	0.1	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|479325306|ref|YP_007865361.1|	-	0.0037	17.1	0.0	0.026	14.3	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|479325306|ref|YP_007865361.1|	-	0.0053	16.7	0.1	0.0089	16.0	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
SbcCD_C	PF13558.1	gi|479325306|ref|YP_007865361.1|	-	0.0071	16.2	0.0	0.031	14.2	0.0	1.9	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
DUF3584	PF12128.3	gi|479325306|ref|YP_007865361.1|	-	0.0087	13.4	0.1	0.013	12.9	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3584)
MobB	PF03205.9	gi|479325306|ref|YP_007865361.1|	-	0.012	15.2	0.1	0.027	14.1	0.1	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NTPase_1	PF03266.10	gi|479325306|ref|YP_007865361.1|	-	0.013	15.2	0.2	0.025	14.2	0.1	1.5	1	0	0	1	1	1	0	NTPase
AAA_17	PF13207.1	gi|479325306|ref|YP_007865361.1|	-	0.018	15.8	0.2	0.041	14.6	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
ATP-synt_ab	PF00006.20	gi|479325306|ref|YP_007865361.1|	-	0.028	13.9	0.0	0.04	13.4	0.0	1.2	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_18	PF13238.1	gi|479325306|ref|YP_007865361.1|	-	0.028	14.7	0.9	0.11	12.8	0.6	2.1	1	1	0	1	1	1	0	AAA	domain
cobW	PF02492.14	gi|479325306|ref|YP_007865361.1|	-	0.035	13.5	1.1	0.1	12.0	0.5	1.9	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
T2SE	PF00437.15	gi|479325306|ref|YP_007865361.1|	-	0.037	12.9	0.1	0.056	12.3	0.1	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
Zeta_toxin	PF06414.7	gi|479325306|ref|YP_007865361.1|	-	0.042	12.9	0.0	0.061	12.4	0.0	1.2	1	0	0	1	1	1	0	Zeta	toxin
AAA_10	PF12846.2	gi|479325306|ref|YP_007865361.1|	-	0.045	13.1	0.2	0.091	12.1	0.1	1.8	1	1	0	1	1	1	0	AAA-like	domain
AAA_13	PF13166.1	gi|479325306|ref|YP_007865361.1|	-	0.074	11.5	2.2	0.14	10.5	0.3	2.0	2	0	0	2	2	2	0	AAA	domain
DUF258	PF03193.11	gi|479325306|ref|YP_007865361.1|	-	0.076	12.1	0.0	0.11	11.6	0.0	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_5	PF07728.9	gi|479325306|ref|YP_007865361.1|	-	0.081	12.6	0.1	0.18	11.5	0.1	1.7	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
FtsK_SpoIIIE	PF01580.13	gi|479325306|ref|YP_007865361.1|	-	0.085	12.3	0.0	0.13	11.7	0.0	1.2	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
Miro	PF08477.8	gi|479325306|ref|YP_007865361.1|	-	0.087	13.3	0.0	0.21	12.1	0.0	1.8	1	0	0	1	1	1	0	Miro-like	protein
AAA_24	PF13479.1	gi|479325306|ref|YP_007865361.1|	-	0.1	12.1	0.5	0.18	11.3	0.4	1.3	1	0	0	1	1	1	0	AAA	domain
NACHT	PF05729.7	gi|479325306|ref|YP_007865361.1|	-	0.11	12.0	0.2	0.34	10.5	0.2	1.7	2	0	0	2	2	2	0	NACHT	domain
AAA_22	PF13401.1	gi|479325306|ref|YP_007865361.1|	-	0.12	12.4	0.3	0.36	10.9	0.2	1.8	1	0	0	1	1	1	0	AAA	domain
AAA_19	PF13245.1	gi|479325306|ref|YP_007865361.1|	-	0.13	12.0	0.0	0.24	11.1	0.0	1.4	1	0	0	1	1	1	0	Part	of	AAA	domain
ABC2_membrane_4	PF12730.2	gi|479325307|ref|YP_007865362.1|	-	0.98	8.5	48.0	1.3	8.1	33.3	1.1	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
CoA_transf_3	PF02515.12	gi|479325309|ref|YP_007865364.1|	-	4.9e-35	120.5	0.0	6e-35	120.2	0.0	1.1	1	0	0	1	1	1	1	CoA-transferase	family	III
AMP-binding	PF00501.23	gi|479325310|ref|YP_007865365.1|	-	5e-82	275.5	0.0	6.2e-82	275.2	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|479325310|ref|YP_007865365.1|	-	5.3e-21	75.3	0.0	1.6e-20	73.7	0.0	1.9	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
MFS_1	PF07690.11	gi|479325311|ref|YP_007865366.1|	-	4.1e-29	101.4	47.9	4.1e-29	101.4	33.2	1.9	1	1	0	1	1	1	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|479325311|ref|YP_007865366.1|	-	7.8e-20	70.8	41.6	1e-17	63.8	9.9	2.1	1	1	1	2	2	2	2	Sugar	(and	other)	transporter
Malate_synthase	PF01274.17	gi|479325313|ref|YP_007865368.1|	-	2.3e-41	141.3	0.0	3.9e-38	130.7	0.0	2.2	2	0	0	2	2	2	2	Malate	synthase
ICL	PF00463.16	gi|479325314|ref|YP_007865369.1|	-	1e-148	495.8	0.3	1.1e-80	271.3	0.0	2.0	1	1	1	2	2	2	2	Isocitrate	lyase	family
PEP_mutase	PF13714.1	gi|479325314|ref|YP_007865369.1|	-	3.2e-17	62.5	0.0	7.2e-17	61.3	0.0	1.5	1	1	0	1	1	1	1	Phosphoenolpyruvate	phosphomutase
Cation_ATPase_N	PF00690.21	gi|479325316|ref|YP_007865371.1|	-	0.12	11.8	0.1	0.31	10.5	0.0	1.8	1	1	1	2	2	2	0	Cation	transporter/ATPase,	N-terminus
Ribosomal_L17	PF01196.14	gi|479325316|ref|YP_007865371.1|	-	0.13	12.8	0.1	0.15	12.6	0.1	1.1	1	0	0	1	1	1	0	Ribosomal	protein	L17
PIN	PF01850.16	gi|479325317|ref|YP_007865372.1|	-	2.5e-18	66.5	2.7	3e-18	66.2	1.9	1.1	1	0	0	1	1	1	1	PIN	domain
PIN_3	PF13470.1	gi|479325317|ref|YP_007865372.1|	-	0.051	14.2	0.4	0.063	13.9	0.3	1.3	1	1	0	1	1	1	0	PIN	domain
Glycos_transf_1	PF00534.15	gi|479325318|ref|YP_007865373.1|	-	3.2e-15	55.9	0.1	5.8e-15	55.1	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|479325318|ref|YP_007865373.1|	-	1.5e-08	34.7	0.0	8.4e-08	32.3	0.0	2.2	1	1	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|479325318|ref|YP_007865373.1|	-	3.5e-06	27.2	0.0	6.6e-06	26.3	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
DUF2204	PF09970.4	gi|479325320|ref|YP_007865375.1|	-	0.00048	19.6	2.0	0.0015	18.0	0.1	2.1	2	0	0	2	2	2	1	Nucleotidyl	transferase	of	unknown	function	(DUF2204)
ADP_ribosyl_GH	PF03747.9	gi|479325321|ref|YP_007865376.1|	-	5.4e-41	141.2	0.0	6.5e-41	141.0	0.0	1.1	1	0	0	1	1	1	1	ADP-ribosylglycohydrolase
Gly-zipper_Omp	PF13488.1	gi|479325321|ref|YP_007865376.1|	-	0.22	11.1	0.1	0.22	11.1	0.1	1.6	2	0	0	2	2	2	0	Glycine	zipper
DUF1634	PF07843.6	gi|479325322|ref|YP_007865377.1|	-	0.23	11.0	5.3	0.18	11.4	0.2	3.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1634)
PTS_EIIC_2	PF13303.1	gi|479325323|ref|YP_007865378.1|	-	0.036	12.9	8.2	0.052	12.3	5.7	1.3	1	0	0	1	1	1	0	Phosphotransferase	system,	EIIC
YjgP_YjgQ	PF03739.9	gi|479325323|ref|YP_007865378.1|	-	1.9	7.1	15.5	2.4	6.8	10.8	1.2	1	0	0	1	1	1	0	Predicted	permease	YjgP/YjgQ	family
Caveolin	PF01146.12	gi|479325323|ref|YP_007865378.1|	-	7.6	6.0	6.4	15	5.1	4.3	1.7	1	1	0	1	1	1	0	Caveolin
Penicil_amidase	PF01804.13	gi|479325324|ref|YP_007865379.1|	-	1.9e-207	691.7	0.5	2.1e-207	691.6	0.4	1.0	1	0	0	1	1	1	1	Penicillin	amidase
NTP_transf_2	PF01909.18	gi|479325325|ref|YP_007865380.1|	-	5.1e-12	45.9	0.4	6.3e-12	45.6	0.3	1.3	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
DUF294	PF03445.8	gi|479325325|ref|YP_007865380.1|	-	0.035	13.7	0.0	0.054	13.1	0.0	1.5	1	1	0	1	1	1	0	Putative	nucleotidyltransferase	DUF294
Adenyl_cycl_N	PF12633.2	gi|479325325|ref|YP_007865380.1|	-	0.12	11.8	0.0	0.14	11.6	0.0	1.3	1	1	0	1	1	1	0	Adenylate	cyclase	NT	domain
HEPN	PF05168.9	gi|479325326|ref|YP_007865381.1|	-	2.5e-36	124.1	3.9	3e-36	123.8	2.7	1.0	1	0	0	1	1	1	1	HEPN	domain
ATP-synt_DE	PF00401.15	gi|479325326|ref|YP_007865381.1|	-	0.038	13.8	7.3	3.1	7.7	0.4	3.2	3	0	0	3	3	3	0	ATP	synthase,	Delta/Epsilon	chain,	long	alpha-helix	domain
DUF4398	PF14346.1	gi|479325326|ref|YP_007865381.1|	-	0.16	12.0	3.5	0.47	10.5	1.1	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4398)
TPR_2	PF07719.12	gi|479325326|ref|YP_007865381.1|	-	3.8	7.6	6.5	4.3	7.5	0.1	3.0	3	0	0	3	3	3	0	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|479325326|ref|YP_007865381.1|	-	3.9	7.4	7.3	6	6.8	1.9	2.9	2	1	1	3	3	3	0	Tetratricopeptide	repeat
NTP_transf_2	PF01909.18	gi|479325327|ref|YP_007865382.1|	-	2.9e-06	27.5	0.0	3.1e-06	27.4	0.0	1.2	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
HEPN	PF05168.9	gi|479325327|ref|YP_007865382.1|	-	0.0062	16.4	0.3	0.0076	16.1	0.2	1.1	1	0	0	1	1	1	1	HEPN	domain
MFS_1	PF07690.11	gi|479325329|ref|YP_007865384.1|	-	2.2e-20	72.7	73.9	8.4e-14	51.0	27.6	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
DUF1228	PF06779.9	gi|479325329|ref|YP_007865384.1|	-	7.1	6.7	18.8	0.089	12.8	2.5	3.6	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF1228)
Sugar_tr	PF00083.19	gi|479325330|ref|YP_007865385.1|	-	4.3e-51	173.8	19.7	5.1e-51	173.6	13.7	1.0	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|479325330|ref|YP_007865385.1|	-	4.1e-23	81.6	37.0	4.1e-12	45.4	10.5	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
DUF3154	PF11351.3	gi|479325330|ref|YP_007865385.1|	-	0.019	14.6	0.3	0.14	11.9	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3154)
DUF948	PF06103.6	gi|479325330|ref|YP_007865385.1|	-	0.16	11.8	1.5	0.33	10.8	0.0	2.1	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
ST7	PF04184.7	gi|479325330|ref|YP_007865385.1|	-	0.19	9.9	0.0	0.31	9.2	0.0	1.2	1	0	0	1	1	1	0	ST7	protein
Methyltransf_11	PF08241.7	gi|479325331|ref|YP_007865386.1|	-	1.1e-14	54.6	0.0	1.6e-14	54.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|479325331|ref|YP_007865386.1|	-	2.3e-12	46.7	0.1	4e-12	45.9	0.1	1.3	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|479325331|ref|YP_007865386.1|	-	7.9e-12	45.1	0.0	2.5e-11	43.5	0.0	1.7	1	1	1	2	2	2	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|479325331|ref|YP_007865386.1|	-	2.9e-09	37.2	0.0	4.9e-09	36.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|479325331|ref|YP_007865386.1|	-	1.9e-06	28.1	0.0	5.3e-06	26.7	0.0	1.8	2	1	0	2	2	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|479325331|ref|YP_007865386.1|	-	2.1e-06	27.2	0.0	4.9e-06	26.0	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_26	PF13659.1	gi|479325331|ref|YP_007865386.1|	-	2.2e-06	27.6	0.0	3.6e-06	26.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|479325331|ref|YP_007865386.1|	-	3.7e-06	27.4	0.0	1.3e-05	25.7	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_8	PF05148.10	gi|479325331|ref|YP_007865386.1|	-	0.00044	19.9	0.0	0.00061	19.4	0.0	1.1	1	0	0	1	1	1	1	Hypothetical	methyltransferase
Ubie_methyltran	PF01209.13	gi|479325331|ref|YP_007865386.1|	-	0.00082	18.5	0.1	0.0016	17.6	0.0	1.4	1	1	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_32	PF13679.1	gi|479325331|ref|YP_007865386.1|	-	0.0055	16.4	0.0	0.0098	15.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
DREV	PF05219.7	gi|479325331|ref|YP_007865386.1|	-	0.076	11.8	0.0	0.1	11.4	0.0	1.1	1	0	0	1	1	1	0	DREV	methyltransferase
TPMT	PF05724.6	gi|479325331|ref|YP_007865386.1|	-	0.12	11.8	0.0	1.3	8.4	0.0	2.0	1	1	1	2	2	2	0	Thiopurine	S-methyltransferase	(TPMT)
Aminotran_1_2	PF00155.16	gi|479325332|ref|YP_007865387.1|	-	3.4e-52	177.6	0.0	4.4e-52	177.2	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.14	gi|479325332|ref|YP_007865387.1|	-	1.5e-12	47.0	0.0	2.4e-12	46.3	0.0	1.3	1	0	0	1	1	1	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.15	gi|479325332|ref|YP_007865387.1|	-	6.4e-09	34.5	0.1	8.8e-09	34.1	0.0	1.3	1	1	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Beta_elim_lyase	PF01212.16	gi|479325332|ref|YP_007865387.1|	-	7.5e-08	31.8	0.0	9.4e-08	31.5	0.0	1.2	1	0	0	1	1	1	1	Beta-eliminating	lyase
Alliinase_C	PF04864.8	gi|479325332|ref|YP_007865387.1|	-	0.00013	20.7	0.1	0.0014	17.3	0.1	2.0	1	1	1	2	2	2	1	Allinase
DegT_DnrJ_EryC1	PF01041.12	gi|479325332|ref|YP_007865387.1|	-	0.00041	19.5	0.0	0.00061	18.9	0.0	1.2	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
PhdYeFM_antitox	PF02604.14	gi|479325332|ref|YP_007865387.1|	-	0.034	13.7	0.2	0.11	12.0	0.0	1.9	2	0	0	2	2	2	0	Antitoxin	Phd_YefM,	type	II	toxin-antitoxin	system
Glyco_hydro_20	PF00728.17	gi|479325332|ref|YP_007865387.1|	-	0.12	11.5	0.0	0.51	9.4	0.0	1.8	2	0	0	2	2	2	0	Glycosyl	hydrolase	family	20,	catalytic	domain
Hjc	PF01870.13	gi|479325333|ref|YP_007865388.1|	-	6.2e-27	93.0	0.0	1e-26	92.3	0.0	1.3	1	0	0	1	1	1	1	Archaeal	holliday	junction	resolvase	(hjc)
Endonuc-MspI	PF09208.5	gi|479325333|ref|YP_007865388.1|	-	0.096	11.7	1.3	0.11	11.5	0.4	1.5	2	0	0	2	2	2	0	Restriction	endonuclease	MspI
Na_Ca_ex	PF01699.19	gi|479325335|ref|YP_007865390.1|	-	1.3e-32	112.3	30.9	2.6e-20	72.4	9.8	2.1	2	0	0	2	2	2	2	Sodium/calcium	exchanger	protein
DUF2231	PF09990.4	gi|479325335|ref|YP_007865390.1|	-	4.5	7.6	9.4	0.71	10.2	2.2	2.8	2	1	1	3	3	3	0	Predicted	membrane	protein	(DUF2231)
AA_permease_2	PF13520.1	gi|479325336|ref|YP_007865391.1|	-	3.8e-09	35.6	59.7	5.6e-09	35.0	41.4	1.2	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|479325336|ref|YP_007865391.1|	-	1.2e-07	30.4	54.6	2e-06	26.4	37.9	2.8	1	1	0	1	1	1	1	Amino	acid	permease
Glyco_hydro_57	PF03065.10	gi|479325337|ref|YP_007865392.1|	-	6.8e-45	153.5	2.9	1.6e-44	152.3	2.0	1.5	1	1	0	1	1	1	1	Glycosyl	hydrolase	family	57
Thg1	PF04446.7	gi|479325338|ref|YP_007865393.1|	-	0.0089	15.6	0.0	0.021	14.4	0.0	1.6	1	0	0	1	1	1	1	tRNAHis	guanylyltransferase
LtrA	PF06772.6	gi|479325338|ref|YP_007865393.1|	-	0.011	14.6	0.4	0.046	12.6	0.1	2.0	1	1	1	2	2	2	0	Bacterial	low	temperature	requirement	A	protein	(LtrA)
SecE	PF00584.15	gi|479325338|ref|YP_007865393.1|	-	0.049	13.2	0.5	0.11	12.0	0.4	1.6	1	0	0	1	1	1	0	SecE/Sec61-gamma	subunits	of	protein	translocation	complex
Shisa	PF13908.1	gi|479325338|ref|YP_007865393.1|	-	0.084	13.0	2.5	0.18	12.0	1.7	1.5	1	0	0	1	1	1	0	Wnt	and	FGF	inhibitory	regulator
DUF1634	PF07843.6	gi|479325338|ref|YP_007865393.1|	-	2	8.0	10.8	0.06	12.9	0.4	3.2	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF1634)
DUF1628	PF07790.6	gi|479325338|ref|YP_007865393.1|	-	2.1	9.1	7.1	4.6	8.0	3.8	2.4	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1628)
SoxE	PF06525.6	gi|479325338|ref|YP_007865393.1|	-	2.3	7.4	13.9	0.42	9.8	6.4	2.1	3	0	0	3	3	3	0	Sulfocyanin	(SoxE)
BPD_transp_1	PF00528.17	gi|479325339|ref|YP_007865394.1|	-	3.7e-15	55.9	22.7	3.7e-15	55.9	15.7	2.2	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.17	gi|479325340|ref|YP_007865395.1|	-	7.2e-13	48.4	22.3	7.2e-13	48.4	15.4	2.0	1	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
ABC_tran	PF00005.22	gi|479325341|ref|YP_007865396.1|	-	1.9e-30	105.9	0.0	4.3e-30	104.7	0.0	1.6	2	0	0	2	2	1	1	ABC	transporter
TOBE_2	PF08402.5	gi|479325341|ref|YP_007865396.1|	-	8.5e-11	41.6	0.1	1.9e-10	40.5	0.1	1.6	1	0	0	1	1	1	1	TOBE	domain
AAA_21	PF13304.1	gi|479325341|ref|YP_007865396.1|	-	5.5e-09	36.3	0.1	0.00048	20.1	0.0	2.8	2	1	1	3	3	3	2	AAA	domain
AAA_15	PF13175.1	gi|479325341|ref|YP_007865396.1|	-	6e-08	32.1	0.0	0.00016	20.8	0.0	2.3	2	0	0	2	2	2	2	AAA	ATPase	domain
TOBE	PF03459.12	gi|479325341|ref|YP_007865396.1|	-	1.1e-05	25.4	0.4	0.0028	17.7	0.0	3.6	3	0	0	3	3	3	1	TOBE	domain
AAA_19	PF13245.1	gi|479325341|ref|YP_007865396.1|	-	0.00011	21.9	0.0	0.00026	20.7	0.0	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_23	PF13476.1	gi|479325341|ref|YP_007865396.1|	-	0.00074	19.9	0.4	0.0044	17.3	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|479325341|ref|YP_007865396.1|	-	0.00078	19.4	0.0	0.0013	18.7	0.0	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
SMC_N	PF02463.14	gi|479325341|ref|YP_007865396.1|	-	0.00089	18.5	0.1	0.18	10.9	0.1	2.2	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
DUF258	PF03193.11	gi|479325341|ref|YP_007865396.1|	-	0.0039	16.3	0.0	0.0092	15.1	0.0	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
Arch_ATPase	PF01637.13	gi|479325341|ref|YP_007865396.1|	-	0.0055	16.4	0.6	0.014	15.1	0.0	1.9	2	0	0	2	2	2	1	Archaeal	ATPase
AAA_30	PF13604.1	gi|479325341|ref|YP_007865396.1|	-	0.0098	15.4	0.0	0.026	14.0	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|479325341|ref|YP_007865396.1|	-	0.013	15.0	0.0	0.028	13.9	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
NTPase_1	PF03266.10	gi|479325341|ref|YP_007865396.1|	-	0.016	14.9	0.1	0.19	11.4	0.0	2.4	2	0	0	2	2	2	0	NTPase
NACHT	PF05729.7	gi|479325341|ref|YP_007865396.1|	-	0.016	14.8	0.0	0.04	13.5	0.0	1.7	1	0	0	1	1	1	0	NACHT	domain
AAA_33	PF13671.1	gi|479325341|ref|YP_007865396.1|	-	0.018	14.9	0.1	5.9	6.7	0.0	3.1	3	0	0	3	3	3	0	AAA	domain
T2SE	PF00437.15	gi|479325341|ref|YP_007865396.1|	-	0.021	13.7	0.0	0.04	12.8	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_22	PF13401.1	gi|479325341|ref|YP_007865396.1|	-	0.033	14.3	0.1	0.097	12.8	0.1	1.9	1	1	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.12	gi|479325341|ref|YP_007865396.1|	-	0.034	13.5	0.0	0.058	12.8	0.0	1.3	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA_25	PF13481.1	gi|479325341|ref|YP_007865396.1|	-	0.045	13.1	0.0	0.13	11.6	0.0	1.7	2	1	0	2	2	2	0	AAA	domain
AAA_17	PF13207.1	gi|479325341|ref|YP_007865396.1|	-	0.046	14.5	2.0	0.29	11.9	1.4	2.7	1	1	0	1	1	1	0	AAA	domain
Mur_ligase_M	PF08245.7	gi|479325341|ref|YP_007865396.1|	-	0.077	13.0	0.0	0.26	11.2	0.0	1.8	2	0	0	2	2	2	0	Mur	ligase	middle	domain
AAA_28	PF13521.1	gi|479325341|ref|YP_007865396.1|	-	0.09	12.7	0.0	0.43	10.5	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
AAA_14	PF13173.1	gi|479325341|ref|YP_007865396.1|	-	0.095	12.5	0.0	0.39	10.6	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
AAA_11	PF13086.1	gi|479325341|ref|YP_007865396.1|	-	0.097	12.2	0.0	0.21	11.1	0.0	1.3	1	1	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|479325341|ref|YP_007865396.1|	-	0.1	12.7	0.3	0.31	11.2	0.2	2.0	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
RNA_helicase	PF00910.17	gi|479325341|ref|YP_007865396.1|	-	0.13	12.4	0.0	0.29	11.3	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
Pox_A32	PF04665.7	gi|479325341|ref|YP_007865396.1|	-	0.19	10.9	1.3	0.23	10.7	0.0	1.8	2	1	0	2	2	2	0	Poxvirus	A32	protein
AAA_18	PF13238.1	gi|479325341|ref|YP_007865396.1|	-	0.21	11.8	4.3	3.7	7.8	3.0	3.2	1	1	0	1	1	1	0	AAA	domain
Glyco_hydro_15	PF00723.16	gi|479325342|ref|YP_007865397.1|	-	9.1e-07	27.7	2.5	2e-05	23.3	0.1	2.8	1	1	2	3	3	3	2	Glycosyl	hydrolases	family	15
DUF608	PF04685.8	gi|479325342|ref|YP_007865397.1|	-	0.0032	16.2	0.3	0.13	10.9	0.5	2.6	2	1	1	3	3	3	2	Protein	of	unknown	function,	DUF608
MFS_1	PF07690.11	gi|479325343|ref|YP_007865398.1|	-	2.9e-59	200.5	57.6	1.7e-57	194.7	34.2	2.1	2	0	0	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|479325343|ref|YP_007865398.1|	-	1.2e-06	27.3	16.3	1.2e-06	27.3	11.3	3.1	2	2	1	3	3	3	2	Sugar	(and	other)	transporter
MFS_3	PF05977.8	gi|479325343|ref|YP_007865398.1|	-	0.3	9.1	21.1	0.0036	15.5	5.8	2.3	2	1	0	2	2	2	0	Transmembrane	secretion	effector
CcmD	PF04995.9	gi|479325343|ref|YP_007865398.1|	-	5	6.9	7.9	0.59	9.9	1.1	2.9	2	0	0	2	2	2	0	Heme	exporter	protein	D	(CcmD)
HEPN	PF05168.9	gi|479325344|ref|YP_007865399.1|	-	1.7e-22	79.4	0.2	2.1e-22	79.2	0.1	1.0	1	0	0	1	1	1	1	HEPN	domain
DUF2972	PF11186.3	gi|479325344|ref|YP_007865399.1|	-	0.084	12.7	1.7	0.15	11.9	1.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2972)
NTP_transf_2	PF01909.18	gi|479325345|ref|YP_007865400.1|	-	2.1e-10	40.8	0.8	3.1e-10	40.2	0.6	1.4	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
DsbD	PF02683.10	gi|479325345|ref|YP_007865400.1|	-	0.12	11.9	0.0	0.54	9.8	0.0	1.8	1	1	1	2	2	2	0	Cytochrome	C	biogenesis	protein	transmembrane	region
HAD_2	PF13419.1	gi|479325346|ref|YP_007865401.1|	-	2.8e-19	70.0	0.0	1.1e-18	68.1	0.0	1.8	1	1	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|479325346|ref|YP_007865401.1|	-	3.3e-05	23.4	0.0	6.2e-05	22.6	0.0	1.4	1	0	0	1	1	1	1	HAD-hyrolase-like
Hydrolase	PF00702.21	gi|479325346|ref|YP_007865401.1|	-	0.13	12.6	0.0	2	8.7	0.0	2.1	1	1	0	2	2	2	0	haloacid	dehalogenase-like	hydrolase
Put_Phosphatase	PF06888.7	gi|479325346|ref|YP_007865401.1|	-	0.14	11.3	0.0	0.17	11.0	0.0	1.2	1	0	0	1	1	1	0	Putative	Phosphatase
NTP_transf_2	PF01909.18	gi|479325347|ref|YP_007865402.1|	-	2.5e-09	37.3	0.3	3.2e-09	37.0	0.2	1.2	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
NTF-like	PF14540.1	gi|479325347|ref|YP_007865402.1|	-	0.055	13.0	0.1	0.079	12.5	0.1	1.6	1	1	0	1	1	1	0	Nucleotidyltransferase-like
DUF294	PF03445.8	gi|479325347|ref|YP_007865402.1|	-	0.13	11.8	0.0	0.2	11.2	0.0	1.5	1	0	0	1	1	1	0	Putative	nucleotidyltransferase	DUF294
HEPN	PF05168.9	gi|479325348|ref|YP_007865403.1|	-	1.7e-26	92.4	0.4	1.8e-26	92.3	0.3	1.0	1	0	0	1	1	1	1	HEPN	domain
Lactamase_B	PF00753.22	gi|479325349|ref|YP_007865404.1|	-	1.4e-24	86.8	0.0	1.6e-24	86.6	0.0	1.1	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|479325349|ref|YP_007865404.1|	-	5.2e-05	22.8	0.0	8.2e-05	22.2	0.0	1.4	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|479325349|ref|YP_007865404.1|	-	0.088	12.5	0.0	0.11	12.1	0.0	1.4	1	0	0	1	1	1	0	Beta-lactamase	superfamily	domain
Acyl-CoA_dh_1	PF00441.19	gi|479325350|ref|YP_007865405.1|	-	1.4e-09	38.2	0.0	9.9e-09	35.4	0.0	2.0	1	1	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_2	PF08028.6	gi|479325350|ref|YP_007865405.1|	-	0.081	13.1	0.0	0.13	12.5	0.0	1.3	1	0	0	1	1	1	0	Acyl-CoA	dehydrogenase,	C-terminal	domain
DUF4143	PF13635.1	gi|479325352|ref|YP_007865407.1|	-	0.0021	18.2	0.0	0.0023	18.0	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
AAA_14	PF13173.1	gi|479325353|ref|YP_007865408.1|	-	1.1e-28	99.6	0.1	1.6e-28	99.1	0.1	1.1	1	0	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|479325353|ref|YP_007865408.1|	-	1.5e-08	34.6	1.4	2.6e-05	24.0	1.0	2.2	1	1	0	1	1	1	1	Archaeal	ATPase
MobB	PF03205.9	gi|479325353|ref|YP_007865408.1|	-	0.00095	18.8	0.1	0.0018	17.9	0.1	1.4	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_16	PF13191.1	gi|479325353|ref|YP_007865408.1|	-	0.0011	18.9	0.0	0.0052	16.7	0.0	1.8	1	1	1	2	2	2	1	AAA	ATPase	domain
AAA_10	PF12846.2	gi|479325353|ref|YP_007865408.1|	-	0.0013	18.2	0.1	0.24	10.8	0.0	2.2	1	1	1	2	2	2	1	AAA-like	domain
MMR_HSR1	PF01926.18	gi|479325353|ref|YP_007865408.1|	-	0.0015	18.4	0.2	0.0022	17.9	0.1	1.4	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
AAA_22	PF13401.1	gi|479325353|ref|YP_007865408.1|	-	0.0016	18.5	0.0	0.041	14.0	0.0	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|479325353|ref|YP_007865408.1|	-	0.0025	18.5	0.0	0.005	17.6	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
ArgK	PF03308.11	gi|479325353|ref|YP_007865408.1|	-	0.003	16.3	0.1	0.0047	15.7	0.1	1.3	1	1	0	1	1	1	1	ArgK	protein
AAA_29	PF13555.1	gi|479325353|ref|YP_007865408.1|	-	0.011	15.2	0.5	0.16	11.4	0.2	2.5	2	1	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
Miro	PF08477.8	gi|479325353|ref|YP_007865408.1|	-	0.021	15.3	0.3	0.058	13.8	0.2	1.8	1	1	0	1	1	1	0	Miro-like	protein
AAA_25	PF13481.1	gi|479325353|ref|YP_007865408.1|	-	0.022	14.1	0.0	0.025	13.9	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|479325353|ref|YP_007865408.1|	-	0.047	13.9	0.0	0.077	13.1	0.0	1.5	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_18	PF13238.1	gi|479325353|ref|YP_007865408.1|	-	0.049	13.9	0.0	0.098	12.9	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
Dynamin_N	PF00350.18	gi|479325353|ref|YP_007865408.1|	-	0.054	13.3	0.5	0.066	13.0	0.4	1.4	1	1	0	1	1	1	0	Dynamin	family
Viral_helicase1	PF01443.13	gi|479325353|ref|YP_007865408.1|	-	0.054	13.0	0.0	0.066	12.7	0.0	1.2	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
APS_kinase	PF01583.15	gi|479325353|ref|YP_007865408.1|	-	0.099	12.2	0.0	0.17	11.4	0.0	1.4	1	0	0	1	1	1	0	Adenylylsulphate	kinase
T2SE	PF00437.15	gi|479325353|ref|YP_007865408.1|	-	0.11	11.3	0.2	2	7.2	0.1	2.0	1	1	1	2	2	2	0	Type	II/IV	secretion	system	protein
MaoC_dehydratas	PF01575.14	gi|479325354|ref|YP_007865409.1|	-	4.7e-18	64.7	0.0	6e-18	64.4	0.0	1.1	1	0	0	1	1	1	1	MaoC	like	domain
MaoC_dehydrat_N	PF13452.1	gi|479325354|ref|YP_007865409.1|	-	2.8e-09	36.8	0.0	4.7e-09	36.1	0.0	1.3	1	1	0	1	1	1	1	N-terminal	half	of	MaoC	dehydratase
Acyl-CoA_dh_N	PF02771.11	gi|479325355|ref|YP_007865410.1|	-	9.5e-29	100.2	0.0	1.9e-28	99.3	0.0	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|479325355|ref|YP_007865410.1|	-	7.3e-19	67.0	0.0	1.4e-18	66.0	0.0	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_1	PF00441.19	gi|479325355|ref|YP_007865410.1|	-	1.2e-14	54.6	0.7	1.4e-08	34.9	0.1	2.3	1	1	1	2	2	2	2	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_ox_N	PF14749.1	gi|479325355|ref|YP_007865410.1|	-	0.00057	20.1	0.0	0.0011	19.2	0.0	1.6	1	1	0	1	1	1	1	Acyl-coenzyme	A	oxidase	N-terminal
HpaB_N	PF11794.3	gi|479325355|ref|YP_007865410.1|	-	0.022	14.1	0.1	0.23	10.8	0.0	2.3	2	1	0	2	2	2	0	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
PmbA_TldD	PF01523.11	gi|479325356|ref|YP_007865411.1|	-	1.2e-34	119.9	0.0	2.5e-34	118.8	0.0	1.6	1	1	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
PmbA_TldD	PF01523.11	gi|479325357|ref|YP_007865412.1|	-	4.1e-46	157.6	0.5	5.4e-46	157.1	0.3	1.2	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
Spore_coat_CotO	PF14153.1	gi|479325357|ref|YP_007865412.1|	-	0.0034	16.8	0.1	0.0054	16.1	0.0	1.2	1	0	0	1	1	1	1	Spore	coat	protein	CotO
PSII_BNR	PF14870.1	gi|479325360|ref|YP_007865415.1|	-	0.028	13.4	0.0	0.056	12.4	0.0	1.4	1	1	0	1	1	1	0	Photosynthesis	system	II	assembly	factor	YCF48
BNR	PF02012.15	gi|479325360|ref|YP_007865415.1|	-	0.059	13.2	0.4	0.22	11.4	0.1	2.2	2	0	0	2	2	2	0	BNR/Asp-box	repeat
Polyketide_cyc2	PF10604.4	gi|479325362|ref|YP_007865417.1|	-	0.0042	17.2	0.0	0.0047	17.0	0.0	1.1	1	0	0	1	1	1	1	Polyketide	cyclase	/	dehydrase	and	lipid	transport
DUF3236	PF11576.3	gi|479325362|ref|YP_007865417.1|	-	0.03	13.7	0.0	0.046	13.1	0.0	1.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3236)
Amidinotransf	PF02274.12	gi|479325363|ref|YP_007865418.1|	-	2.2e-61	207.4	0.0	2.5e-61	207.2	0.0	1.0	1	0	0	1	1	1	1	Amidinotransferase
MFS_1	PF07690.11	gi|479325364|ref|YP_007865419.1|	-	1.2e-30	106.4	36.2	1.6e-18	66.5	12.2	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|479325364|ref|YP_007865419.1|	-	5.6e-22	77.9	30.7	4.5e-18	65.0	8.0	2.9	2	1	0	2	2	2	2	Sugar	(and	other)	transporter
MFS_2	PF13347.1	gi|479325364|ref|YP_007865419.1|	-	5.2e-05	21.8	5.5	5.2e-05	21.8	3.8	3.1	2	2	0	2	2	2	1	MFS/sugar	transport	protein
DUF791	PF05631.9	gi|479325364|ref|YP_007865419.1|	-	0.00018	20.3	20.2	0.0046	15.6	5.1	2.1	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF791)
MFS_3	PF05977.8	gi|479325364|ref|YP_007865419.1|	-	0.00065	17.9	8.6	0.051	11.6	0.6	2.6	1	1	1	2	2	2	2	Transmembrane	secretion	effector
DcpS_C	PF11969.3	gi|479325364|ref|YP_007865419.1|	-	0.022	14.9	0.0	0.044	14.0	0.0	1.4	1	0	0	1	1	1	0	Scavenger	mRNA	decapping	enzyme	C-term	binding
PALP	PF00291.20	gi|479325365|ref|YP_007865420.1|	-	6.4e-34	117.5	0.0	8.7e-34	117.1	0.0	1.2	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
ABC_tran	PF00005.22	gi|479325366|ref|YP_007865421.1|	-	7.7e-33	113.6	0.0	1.2e-32	113.0	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|479325366|ref|YP_007865421.1|	-	2.5e-14	53.9	1.9	3.7e-10	40.2	0.0	2.5	2	1	0	3	3	2	2	AAA	domain
SMC_N	PF02463.14	gi|479325366|ref|YP_007865421.1|	-	6.1e-06	25.6	0.0	0.046	12.9	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_10	PF12846.2	gi|479325366|ref|YP_007865421.1|	-	2.4e-05	23.9	0.0	0.05	13.0	0.0	2.2	2	0	0	2	2	2	2	AAA-like	domain
IstB_IS21	PF01695.12	gi|479325366|ref|YP_007865421.1|	-	5.3e-05	22.7	0.1	0.077	12.4	0.0	2.6	2	1	0	2	2	2	2	IstB-like	ATP	binding	protein
UPF0079	PF02367.12	gi|479325366|ref|YP_007865421.1|	-	7.4e-05	22.3	0.1	0.00017	21.2	0.0	1.5	1	0	0	1	1	1	1	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_15	PF13175.1	gi|479325366|ref|YP_007865421.1|	-	0.00011	21.4	0.7	0.14	11.2	0.0	2.7	2	1	1	3	3	3	2	AAA	ATPase	domain
AAA_16	PF13191.1	gi|479325366|ref|YP_007865421.1|	-	0.0003	20.8	0.1	0.0011	19.0	0.1	1.8	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_14	PF13173.1	gi|479325366|ref|YP_007865421.1|	-	0.00044	20.1	0.1	0.0027	17.5	0.0	2.3	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|479325366|ref|YP_007865421.1|	-	0.00047	19.6	0.0	0.00091	18.7	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.1	gi|479325366|ref|YP_007865421.1|	-	0.00061	19.9	1.7	0.006	16.7	1.2	2.5	1	1	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|479325366|ref|YP_007865421.1|	-	0.00064	18.9	0.0	0.0012	18.1	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_25	PF13481.1	gi|479325366|ref|YP_007865421.1|	-	0.00088	18.7	0.0	0.016	14.6	0.0	2.5	3	0	0	3	3	3	1	AAA	domain
AAA_23	PF13476.1	gi|479325366|ref|YP_007865421.1|	-	0.0012	19.1	1.3	0.0028	18.0	0.9	1.9	1	1	0	1	1	1	1	AAA	domain
NB-ARC	PF00931.17	gi|479325366|ref|YP_007865421.1|	-	0.0015	17.4	1.2	0.0046	15.8	0.1	2.1	2	1	1	3	3	3	1	NB-ARC	domain
AAA	PF00004.24	gi|479325366|ref|YP_007865421.1|	-	0.0026	17.9	0.2	0.0073	16.5	0.2	2.0	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_19	PF13245.1	gi|479325366|ref|YP_007865421.1|	-	0.0034	17.1	0.0	0.0075	15.9	0.0	1.5	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_33	PF13671.1	gi|479325366|ref|YP_007865421.1|	-	0.0038	17.1	0.1	0.0089	15.9	0.1	1.9	1	1	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|479325366|ref|YP_007865421.1|	-	0.007	16.0	0.3	0.013	15.1	0.0	1.7	2	0	0	2	2	2	1	Archaeal	ATPase
NACHT	PF05729.7	gi|479325366|ref|YP_007865421.1|	-	0.0099	15.5	0.2	0.023	14.3	0.0	1.6	2	0	0	2	2	2	1	NACHT	domain
AAA_30	PF13604.1	gi|479325366|ref|YP_007865421.1|	-	0.021	14.4	0.0	0.059	12.9	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
SbcCD_C	PF13558.1	gi|479325366|ref|YP_007865421.1|	-	0.022	14.6	0.0	0.074	12.9	0.0	2.0	2	1	0	2	2	1	0	Putative	exonuclease	SbcCD,	C	subunit
RNA_helicase	PF00910.17	gi|479325366|ref|YP_007865421.1|	-	0.031	14.4	0.0	0.21	11.7	0.0	2.2	2	0	0	2	2	2	0	RNA	helicase
MutS_V	PF00488.16	gi|479325366|ref|YP_007865421.1|	-	0.042	13.2	0.0	0.31	10.4	0.0	1.9	2	0	0	2	2	2	0	MutS	domain	V
NTPase_1	PF03266.10	gi|479325366|ref|YP_007865421.1|	-	0.044	13.4	0.7	0.25	11.0	0.1	2.3	2	0	0	2	2	2	0	NTPase
Miro	PF08477.8	gi|479325366|ref|YP_007865421.1|	-	0.049	14.1	0.1	0.14	12.6	0.0	1.8	2	0	0	2	2	1	0	Miro-like	protein
Zeta_toxin	PF06414.7	gi|479325366|ref|YP_007865421.1|	-	0.055	12.5	0.1	0.12	11.4	0.0	1.5	1	0	0	1	1	1	0	Zeta	toxin
AAA_5	PF07728.9	gi|479325366|ref|YP_007865421.1|	-	0.055	13.1	0.2	0.25	11.0	0.0	2.0	2	1	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
PPK2	PF03976.9	gi|479325366|ref|YP_007865421.1|	-	0.057	12.7	0.0	0.09	12.0	0.0	1.3	1	0	0	1	1	1	0	Polyphosphate	kinase	2	(PPK2)
AAA_28	PF13521.1	gi|479325366|ref|YP_007865421.1|	-	0.078	12.9	0.2	0.27	11.1	0.1	1.9	2	0	0	2	2	2	0	AAA	domain
MobB	PF03205.9	gi|479325366|ref|YP_007865421.1|	-	0.082	12.6	0.1	0.2	11.3	0.0	1.7	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
cobW	PF02492.14	gi|479325366|ref|YP_007865421.1|	-	0.14	11.6	0.1	0.22	10.9	0.1	1.3	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_17	PF13207.1	gi|479325366|ref|YP_007865421.1|	-	0.29	11.9	2.2	0.92	10.3	1.5	2.2	1	1	0	1	1	1	0	AAA	domain
ABC2_membrane	PF01061.19	gi|479325367|ref|YP_007865422.1|	-	7e-12	44.9	35.9	7e-12	44.9	24.9	1.7	1	1	1	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.2	gi|479325367|ref|YP_007865422.1|	-	2.5e-07	30.0	37.9	2.5e-07	30.0	26.3	2.0	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
ATP-synt_J	PF04911.7	gi|479325367|ref|YP_007865422.1|	-	0.023	14.1	0.0	0.067	12.6	0.0	1.7	1	0	0	1	1	1	0	ATP	synthase	j	chain
ABC2_membrane_4	PF12730.2	gi|479325367|ref|YP_007865422.1|	-	0.48	9.5	44.4	0.6	9.2	30.8	1.1	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
MFS_1	PF07690.11	gi|479325368|ref|YP_007865423.1|	-	1.1e-36	126.3	66.6	1.8e-32	112.4	26.8	1.9	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Pam17	PF08566.5	gi|479325368|ref|YP_007865423.1|	-	0.2	11.3	1.0	0.43	10.2	0.7	1.5	1	0	0	1	1	1	0	Mitochondrial	import	protein	Pam17
MFS_1_like	PF12832.2	gi|479325368|ref|YP_007865423.1|	-	0.3	10.9	0.0	0.3	10.9	0.0	4.0	4	2	0	4	4	4	0	MFS_1	like	family
Pro-kuma_activ	PF09286.6	gi|479325369|ref|YP_007865424.1|	-	2.1e-24	86.1	0.0	4.2e-24	85.1	0.0	1.5	1	0	0	1	1	1	1	Pro-kumamolisin,	activation	domain
Peptidase_S8	PF00082.17	gi|479325369|ref|YP_007865424.1|	-	1.6e-08	34.0	1.8	5.2e-08	32.3	1.3	1.9	1	0	0	1	1	1	1	Subtilase	family
LRR_3	PF07725.7	gi|479325369|ref|YP_007865424.1|	-	0.2	11.4	0.0	0.48	10.2	0.0	1.7	1	0	0	1	1	1	0	Leucine	Rich	Repeat
MFS_1	PF07690.11	gi|479325370|ref|YP_007865425.1|	-	4.7e-26	91.3	46.2	1.2e-16	60.3	25.8	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
PIG-F	PF06699.6	gi|479325370|ref|YP_007865425.1|	-	3.1	7.6	9.1	0.15	11.9	1.3	2.5	3	0	0	3	3	3	0	GPI	biosynthesis	protein	family	Pig-F
Na_H_Exchanger	PF00999.16	gi|479325371|ref|YP_007865426.1|	-	2e-49	168.1	44.0	2.4e-49	167.8	30.5	1.0	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
Vma12	PF11712.3	gi|479325371|ref|YP_007865426.1|	-	0.026	14.2	0.9	0.026	14.2	0.6	2.5	3	0	0	3	3	3	0	Endoplasmic	reticulum-based	factor	for	assembly	of	V-ATPase
UPF0139	PF03669.8	gi|479325371|ref|YP_007865426.1|	-	0.035	13.6	0.2	0.13	11.7	0.0	2.0	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0139)
Cytochrome-c551	PF10643.4	gi|479325371|ref|YP_007865426.1|	-	0.18	11.0	4.7	0.36	10.0	3.3	1.5	1	0	0	1	1	1	0	Photosystem	P840	reaction-centre	cytochrome	c-551
DUF1129	PF06570.6	gi|479325371|ref|YP_007865426.1|	-	3.6	6.8	14.6	2.2	7.5	3.7	2.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1129)
OrfB_IS605	PF01385.14	gi|479325372|ref|YP_007865427.1|	-	1.2e-37	129.4	5.7	2.5e-37	128.4	4.0	1.5	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.6	gi|479325372|ref|YP_007865427.1|	-	4.2e-28	96.8	0.3	1.2e-27	95.3	0.2	1.8	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
HTH_OrfB_IS605	PF12323.3	gi|479325372|ref|YP_007865427.1|	-	2e-08	33.3	1.1	2.9e-08	32.9	0.1	1.8	2	0	0	2	2	2	1	Helix-turn-helix	domain
DUF3543	PF12063.3	gi|479325372|ref|YP_007865427.1|	-	0.026	13.7	3.2	0.29	10.2	0.2	2.4	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF3543)
TF_Zn_Ribbon	PF08271.7	gi|479325372|ref|YP_007865427.1|	-	0.029	13.7	1.1	5.2	6.4	0.0	2.8	3	0	0	3	3	3	0	TFIIB	zinc-binding
DZR	PF12773.2	gi|479325372|ref|YP_007865427.1|	-	0.077	12.8	0.3	0.14	11.9	0.2	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
DUF3804	PF12707.2	gi|479325372|ref|YP_007865427.1|	-	0.085	12.4	0.2	0.17	11.4	0.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3804)
zinc_ribbon_2	PF13240.1	gi|479325372|ref|YP_007865427.1|	-	0.091	12.2	1.4	12	5.5	0.0	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF1610	PF07754.6	gi|479325372|ref|YP_007865427.1|	-	0.12	12.5	0.4	0.12	12.5	0.3	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
zf-ribbon_3	PF13248.1	gi|479325372|ref|YP_007865427.1|	-	0.12	11.5	2.9	4.5	6.5	3.0	2.2	1	1	1	2	2	2	0	zinc-ribbon	domain
Y1_Tnp	PF01797.11	gi|479325373|ref|YP_007865428.1|	-	1.8e-38	131.1	2.2	2e-38	130.9	1.5	1.0	1	0	0	1	1	1	1	Transposase	IS200	like
FBP	PF07299.6	gi|479325373|ref|YP_007865428.1|	-	0.089	12.1	0.4	0.13	11.6	0.3	1.2	1	0	0	1	1	1	0	Fibronectin-binding	protein	(FBP)
Amidohydro_2	PF04909.9	gi|479325375|ref|YP_007865430.1|	-	6.6e-06	25.8	0.0	0.057	12.9	0.0	2.1	1	1	1	2	2	2	2	Amidohydrolase
CCG	PF02754.11	gi|479325376|ref|YP_007865431.1|	-	6.4e-30	102.9	0.2	1e-15	57.4	0.0	2.6	3	0	0	3	3	3	2	Cysteine-rich	domain
Fer4_8	PF13183.1	gi|479325377|ref|YP_007865432.1|	-	2.2e-10	40.4	7.5	3.3e-10	39.8	5.2	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|479325377|ref|YP_007865432.1|	-	9.2e-10	38.7	4.8	1.5e-09	38.0	3.4	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|479325377|ref|YP_007865432.1|	-	8.3e-08	32.3	7.0	1.8e-07	31.2	4.9	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|479325377|ref|YP_007865432.1|	-	8.2e-06	26.1	2.9	0.0025	18.1	0.2	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|479325377|ref|YP_007865432.1|	-	1.8e-05	25.0	6.8	3.3e-05	24.1	4.7	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|479325377|ref|YP_007865432.1|	-	8.6e-05	23.2	2.1	0.012	16.3	0.2	2.4	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Fer4_10	PF13237.1	gi|479325377|ref|YP_007865432.1|	-	0.0006	19.5	11.8	0.0078	15.9	9.0	2.0	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|479325377|ref|YP_007865432.1|	-	0.0027	17.5	9.8	0.24	11.4	1.4	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|479325377|ref|YP_007865432.1|	-	0.025	14.8	12.7	0.57	10.6	1.5	2.2	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|479325377|ref|YP_007865432.1|	-	0.03	14.1	9.7	0.14	12.0	6.7	1.9	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|479325377|ref|YP_007865432.1|	-	0.096	12.3	12.8	0.16	11.6	1.5	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_20	PF14691.1	gi|479325377|ref|YP_007865432.1|	-	0.21	11.1	6.7	0.15	11.6	0.3	2.2	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_15	PF13459.1	gi|479325377|ref|YP_007865432.1|	-	0.23	12.0	2.3	0.92	10.1	0.1	2.4	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
IZUMO	PF15005.1	gi|479325377|ref|YP_007865432.1|	-	0.68	9.9	5.0	1.6	8.7	0.6	2.4	2	0	0	2	2	2	0	Izumo	sperm-egg	fusion
Pyr_redox_2	PF07992.9	gi|479325379|ref|YP_007865434.1|	-	4.7e-13	49.4	0.0	9.1e-13	48.5	0.0	1.6	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|479325379|ref|YP_007865434.1|	-	1.3e-08	33.7	1.2	0.00045	18.7	0.2	2.1	1	1	1	2	2	2	2	HI0933-like	protein
FAD_binding_2	PF00890.19	gi|479325379|ref|YP_007865434.1|	-	4.7e-08	32.2	0.8	5e-06	25.6	0.2	2.1	1	1	1	2	2	2	1	FAD	binding	domain
Pyr_redox_3	PF13738.1	gi|479325379|ref|YP_007865434.1|	-	2.2e-07	31.1	0.7	0.0039	17.2	0.1	2.2	1	1	1	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|479325379|ref|YP_007865434.1|	-	2.6e-07	30.0	0.9	1.8e-06	27.2	0.3	2.1	1	1	1	2	2	2	1	FAD	binding	domain
GIDA	PF01134.17	gi|479325379|ref|YP_007865434.1|	-	3e-07	29.6	0.1	0.00014	20.8	0.0	2.3	2	0	0	2	2	2	2	Glucose	inhibited	division	protein	A
FAD_oxidored	PF12831.2	gi|479325379|ref|YP_007865434.1|	-	1.5e-06	27.5	0.1	3.4e-06	26.3	0.1	1.6	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
DAO	PF01266.19	gi|479325379|ref|YP_007865434.1|	-	2.1e-05	23.5	0.7	0.00035	19.5	0.0	2.4	3	0	0	3	3	3	1	FAD	dependent	oxidoreductase
Thi4	PF01946.12	gi|479325379|ref|YP_007865434.1|	-	3.7e-05	22.9	0.3	6.6e-05	22.1	0.2	1.5	1	1	0	1	1	1	1	Thi4	family
Pyr_redox	PF00070.22	gi|479325379|ref|YP_007865434.1|	-	6e-05	23.3	0.7	0.017	15.4	0.1	2.5	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|479325379|ref|YP_007865434.1|	-	9.8e-05	22.3	0.0	0.00024	21.0	0.0	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Amino_oxidase	PF01593.19	gi|479325379|ref|YP_007865434.1|	-	0.00026	20.2	0.0	0.064	12.3	0.0	2.2	2	0	0	2	2	2	2	Flavin	containing	amine	oxidoreductase
NAD_binding_9	PF13454.1	gi|479325379|ref|YP_007865434.1|	-	0.00028	20.6	0.2	0.22	11.2	0.0	3.0	3	0	0	3	3	3	1	FAD-NAD(P)-binding
Lycopene_cycl	PF05834.7	gi|479325379|ref|YP_007865434.1|	-	0.0022	17.0	0.0	0.0029	16.5	0.0	1.3	1	0	0	1	1	1	1	Lycopene	cyclase	protein
CPSase_L_chain	PF00289.17	gi|479325379|ref|YP_007865434.1|	-	0.0046	17.0	0.0	0.01	15.9	0.0	1.7	1	1	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
NAD_binding_7	PF13241.1	gi|479325379|ref|YP_007865434.1|	-	0.018	15.2	0.1	0.054	13.7	0.0	1.8	1	1	0	1	1	1	0	Putative	NAD(P)-binding
ThiF	PF00899.16	gi|479325379|ref|YP_007865434.1|	-	0.034	13.9	0.5	0.089	12.6	0.3	1.9	1	1	0	1	1	1	0	ThiF	family
IlvN	PF07991.7	gi|479325379|ref|YP_007865434.1|	-	0.035	13.4	0.2	0.078	12.3	0.1	1.6	1	1	0	1	1	1	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
Shikimate_DH	PF01488.15	gi|479325379|ref|YP_007865434.1|	-	0.038	14.0	0.3	0.081	13.0	0.2	1.5	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
AlaDh_PNT_C	PF01262.16	gi|479325379|ref|YP_007865434.1|	-	0.066	12.7	0.5	0.81	9.2	0.1	2.5	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
PEPcase_2	PF14010.1	gi|479325379|ref|YP_007865434.1|	-	0.088	11.0	0.1	0.13	10.5	0.0	1.1	1	0	0	1	1	1	0	Phosphoenolpyruvate	carboxylase
K_oxygenase	PF13434.1	gi|479325379|ref|YP_007865434.1|	-	0.11	11.3	0.3	0.6	8.9	0.0	2.0	2	0	0	2	2	2	0	L-lysine	6-monooxygenase	(NADPH-requiring)
CCG	PF02754.11	gi|479325380|ref|YP_007865435.1|	-	2e-08	34.0	0.0	1e-06	28.6	0.0	2.9	2	1	0	2	2	2	1	Cysteine-rich	domain
Fer4_8	PF13183.1	gi|479325381|ref|YP_007865436.1|	-	5.1e-10	39.2	6.5	9.1e-10	38.4	4.5	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|479325381|ref|YP_007865436.1|	-	7.6e-09	35.7	6.7	7.6e-09	35.7	4.7	1.7	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|479325381|ref|YP_007865436.1|	-	5e-06	26.6	8.7	1.1e-05	25.6	6.0	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|479325381|ref|YP_007865436.1|	-	7e-06	26.3	2.4	0.1	13.0	0.3	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|479325381|ref|YP_007865436.1|	-	2e-05	24.2	8.3	0.0061	16.4	0.9	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|479325381|ref|YP_007865436.1|	-	4.3e-05	23.2	9.5	0.00011	21.9	6.6	1.7	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|479325381|ref|YP_007865436.1|	-	0.00038	20.7	9.8	0.0041	17.4	7.6	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|479325381|ref|YP_007865436.1|	-	0.0014	18.7	11.1	0.0024	18.0	0.8	2.2	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|479325381|ref|YP_007865436.1|	-	0.009	15.8	8.0	0.071	12.9	5.8	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|479325381|ref|YP_007865436.1|	-	0.013	16.2	9.5	0.066	13.9	6.7	2.1	1	1	0	1	1	1	0	4Fe-4S	double	cluster	binding	domain
Fer4_20	PF14691.1	gi|479325381|ref|YP_007865436.1|	-	0.044	13.3	6.1	0.095	12.3	0.3	2.3	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4	PF00037.22	gi|479325381|ref|YP_007865436.1|	-	0.28	10.8	16.9	0.12	11.9	1.9	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|479325381|ref|YP_007865436.1|	-	0.54	10.2	13.0	2.6	8.0	1.4	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_13	PF13370.1	gi|479325381|ref|YP_007865436.1|	-	3.2	8.2	9.3	2.5	8.5	0.2	3.0	3	0	0	3	3	3	0	4Fe-4S	single	cluster	domain
TusA	PF01206.12	gi|479325382|ref|YP_007865437.1|	-	2.2e-25	88.0	0.0	2.6e-25	87.8	0.0	1.0	1	0	0	1	1	1	1	Sulfurtransferase	TusA
DUF2249	PF10006.4	gi|479325382|ref|YP_007865437.1|	-	0.0065	16.0	0.0	0.017	14.6	0.0	1.6	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2249)
SH3_3	PF08239.6	gi|479325382|ref|YP_007865437.1|	-	0.11	12.6	0.0	0.15	12.2	0.0	1.3	1	0	0	1	1	1	0	Bacterial	SH3	domain
DrsE_2	PF13686.1	gi|479325383|ref|YP_007865438.1|	-	4.7e-29	101.0	0.1	6.7e-29	100.5	0.1	1.2	1	0	0	1	1	1	1	DsrE/DsrF/DrsH-like	family
DrsE	PF02635.10	gi|479325383|ref|YP_007865438.1|	-	1.3e-07	31.6	0.0	5.8e-07	29.5	0.0	1.8	1	1	0	1	1	1	1	DsrE/DsrF-like	family
DrsE	PF02635.10	gi|479325384|ref|YP_007865439.1|	-	1.7e-18	66.8	0.0	1.9e-18	66.6	0.0	1.0	1	0	0	1	1	1	1	DsrE/DsrF-like	family
DrsE_2	PF13686.1	gi|479325384|ref|YP_007865439.1|	-	1.8e-15	57.0	1.1	6e-07	29.3	0.2	2.0	1	1	1	2	2	2	2	DsrE/DsrF/DrsH-like	family
Pyr_redox_2	PF07992.9	gi|479325385|ref|YP_007865440.1|	-	2.2e-25	89.7	9.3	1.4e-24	87.1	6.4	3.3	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|479325385|ref|YP_007865440.1|	-	6.6e-20	71.3	6.1	2.3e-15	56.7	0.2	2.4	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|479325385|ref|YP_007865440.1|	-	1.6e-15	57.0	0.0	2.8e-15	56.2	0.0	1.4	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox_3	PF13738.1	gi|479325385|ref|YP_007865440.1|	-	3.2e-11	43.6	0.0	1.5e-10	41.4	0.0	1.9	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|479325385|ref|YP_007865440.1|	-	7.4e-11	41.5	3.8	6.5e-06	25.2	0.1	2.8	3	1	0	3	3	3	2	Glucose	inhibited	division	protein	A
DAO	PF01266.19	gi|479325385|ref|YP_007865440.1|	-	5.1e-09	35.5	13.1	0.00087	18.2	1.8	3.4	4	0	0	4	4	4	3	FAD	dependent	oxidoreductase
HI0933_like	PF03486.9	gi|479325385|ref|YP_007865440.1|	-	1.6e-08	33.4	2.7	0.00025	19.6	0.6	3.7	4	0	0	4	4	4	2	HI0933-like	protein
FAD_binding_3	PF01494.14	gi|479325385|ref|YP_007865440.1|	-	8.5e-08	31.6	1.0	6.7e-05	22.1	0.1	2.2	2	0	0	2	2	2	2	FAD	binding	domain
Trp_halogenase	PF04820.9	gi|479325385|ref|YP_007865440.1|	-	1.2e-07	30.7	1.3	3.9e-06	25.7	0.2	2.1	2	0	0	2	2	2	1	Tryptophan	halogenase
FAD_binding_2	PF00890.19	gi|479325385|ref|YP_007865440.1|	-	1.8e-07	30.4	8.5	1.9e-06	26.9	1.4	3.1	3	0	0	3	3	3	1	FAD	binding	domain
FAD_oxidored	PF12831.2	gi|479325385|ref|YP_007865440.1|	-	2e-07	30.4	0.8	3.5e-05	23.0	0.0	2.3	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
AlaDh_PNT_C	PF01262.16	gi|479325385|ref|YP_007865440.1|	-	3.4e-05	23.4	0.2	0.021	14.3	0.0	2.4	2	0	0	2	2	2	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
Thi4	PF01946.12	gi|479325385|ref|YP_007865440.1|	-	5.8e-05	22.3	6.0	0.00012	21.2	0.3	2.7	3	0	0	3	3	3	1	Thi4	family
NAD_binding_8	PF13450.1	gi|479325385|ref|YP_007865440.1|	-	0.00012	21.9	6.9	0.0026	17.7	1.1	2.3	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
K_oxygenase	PF13434.1	gi|479325385|ref|YP_007865440.1|	-	0.00022	20.2	1.4	0.029	13.3	0.0	2.6	2	1	1	3	3	3	1	L-lysine	6-monooxygenase	(NADPH-requiring)
NAD_binding_7	PF13241.1	gi|479325385|ref|YP_007865440.1|	-	0.00026	21.2	0.3	0.83	9.9	0.0	2.6	2	0	0	2	2	2	2	Putative	NAD(P)-binding
NAD_Gly3P_dh_N	PF01210.18	gi|479325385|ref|YP_007865440.1|	-	0.00058	19.6	0.0	1.2	8.8	0.0	2.6	3	0	0	3	3	2	2	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
3HCDH_N	PF02737.13	gi|479325385|ref|YP_007865440.1|	-	0.00063	19.4	1.5	0.28	10.8	0.0	2.2	2	0	0	2	2	2	2	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Lycopene_cycl	PF05834.7	gi|479325385|ref|YP_007865440.1|	-	0.0022	16.9	0.7	1.4	7.7	0.0	2.3	2	0	0	2	2	2	2	Lycopene	cyclase	protein
GDI	PF00996.13	gi|479325385|ref|YP_007865440.1|	-	0.0058	14.9	1.0	0.0062	14.8	0.1	1.4	2	0	0	2	2	2	1	GDP	dissociation	inhibitor
UDPG_MGDP_dh_N	PF03721.9	gi|479325385|ref|YP_007865440.1|	-	0.0094	15.3	4.0	0.34	10.2	0.4	2.4	2	0	0	2	2	2	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
TrkA_N	PF02254.13	gi|479325385|ref|YP_007865440.1|	-	0.024	14.6	2.1	0.96	9.4	0.5	2.7	2	0	0	2	2	2	0	TrkA-N	domain
XdhC_C	PF13478.1	gi|479325385|ref|YP_007865440.1|	-	0.065	13.5	0.1	0.19	12.0	0.0	1.8	2	0	0	2	2	2	0	XdhC	Rossmann	domain
NAD_binding_10	PF13460.1	gi|479325385|ref|YP_007865440.1|	-	0.13	12.2	0.0	0.13	12.2	0.0	2.2	2	0	0	2	2	2	0	NADH(P)-binding
Myosin_N	PF02736.14	gi|479325385|ref|YP_007865440.1|	-	0.18	11.5	2.6	0.18	11.4	0.2	2.3	2	0	0	2	2	2	0	Myosin	N-terminal	SH3-like	domain
ApbA	PF02558.11	gi|479325385|ref|YP_007865440.1|	-	0.24	10.8	1.7	20	4.6	0.6	3.0	4	0	0	4	4	4	0	Ketopantoate	reductase	PanE/ApbA
Thioredoxin_3	PF13192.1	gi|479325387|ref|YP_007865442.1|	-	5.2e-16	58.2	0.1	9e-16	57.4	0.1	1.4	1	0	0	1	1	1	1	Thioredoxin	domain
Thioredoxin	PF00085.15	gi|479325387|ref|YP_007865442.1|	-	0.0031	17.1	0.1	0.0065	16.1	0.0	1.6	2	0	0	2	2	2	1	Thioredoxin
Thioredoxin_9	PF14595.1	gi|479325387|ref|YP_007865442.1|	-	0.02	14.4	0.1	0.031	13.8	0.0	1.3	1	0	0	1	1	1	0	Thioredoxin
Glutaredoxin	PF00462.19	gi|479325387|ref|YP_007865442.1|	-	0.022	14.7	0.6	0.056	13.4	0.4	1.7	1	0	0	1	1	1	0	Glutaredoxin
DUF836	PF05768.9	gi|479325387|ref|YP_007865442.1|	-	0.026	14.7	0.2	0.84	9.9	0.0	2.2	2	0	0	2	2	2	0	Glutaredoxin-like	domain	(DUF836)
Thioredoxin_2	PF13098.1	gi|479325387|ref|YP_007865442.1|	-	0.084	13.0	1.0	0.69	10.1	0.5	2.2	1	1	0	1	1	1	0	Thioredoxin-like	domain
DUF4411	PF14367.1	gi|479325387|ref|YP_007865442.1|	-	0.085	12.5	0.0	0.14	11.9	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4411)
UPF0278	PF08745.6	gi|479325388|ref|YP_007865443.1|	-	0.0079	15.4	0.1	0.012	14.8	0.1	1.2	1	0	0	1	1	1	1	UPF0278	family
Gar1	PF04410.9	gi|479325388|ref|YP_007865443.1|	-	0.079	12.4	0.0	6.7	6.1	0.0	2.2	2	0	0	2	2	2	0	Gar1/Naf1	RNA	binding	region
Lipase_3	PF01764.20	gi|479325388|ref|YP_007865443.1|	-	0.14	11.7	0.0	0.16	11.5	0.0	1.2	1	0	0	1	1	1	0	Lipase	(class	3)
DUF1641	PF07849.6	gi|479325389|ref|YP_007865444.1|	-	4.6e-13	48.5	0.2	2.3e-12	46.3	0.0	2.2	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1641)
MgtE_N	PF03448.12	gi|479325389|ref|YP_007865444.1|	-	1.2e-05	25.5	30.9	0.017	15.4	1.8	5.9	2	1	4	6	6	6	6	MgtE	intracellular	N	domain
INTS5_N	PF14837.1	gi|479325389|ref|YP_007865444.1|	-	2.2	7.6	9.4	1.4	8.2	0.8	3.2	1	1	1	3	3	3	0	Integrator	complex	subunit	5	N-terminus
Birna_VP3	PF01767.11	gi|479325389|ref|YP_007865444.1|	-	5.6	6.5	13.3	9.5	5.7	0.1	3.9	1	1	1	4	4	4	0	Birnavirus	VP3	protein
Hist_deacetyl	PF00850.14	gi|479325390|ref|YP_007865445.1|	-	4.4e-55	187.1	0.0	5.9e-55	186.7	0.0	1.1	1	0	0	1	1	1	1	Histone	deacetylase	domain
Peptidase_M23	PF01551.17	gi|479325391|ref|YP_007865446.1|	-	8.1e-06	25.8	0.0	3.3e-05	23.8	0.0	1.9	2	0	0	2	2	2	1	Peptidase	family	M23
RnfC_N	PF13375.1	gi|479325391|ref|YP_007865446.1|	-	0.12	12.1	0.0	1.6	8.5	0.0	2.2	2	0	0	2	2	2	0	RnfC	Barrel	sandwich	hybrid	domain
Radical_SAM	PF04055.16	gi|479325392|ref|YP_007865447.1|	-	1.2e-12	48.3	0.4	6.2e-12	46.0	0.1	2.0	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|479325392|ref|YP_007865447.1|	-	0.0027	17.8	0.0	0.0089	16.1	0.0	1.9	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Radical_SAM	PF04055.16	gi|479325394|ref|YP_007865449.1|	-	1.2e-14	54.8	0.0	4.3e-13	49.7	0.0	2.1	1	1	1	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|479325394|ref|YP_007865449.1|	-	0.011	15.8	0.0	0.018	15.1	0.0	1.3	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
BATS	PF06968.8	gi|479325394|ref|YP_007865449.1|	-	0.056	13.2	0.1	0.14	11.9	0.0	1.6	1	0	0	1	1	1	0	Biotin	and	Thiamin	Synthesis	associated	domain
BPL_LplA_LipB	PF03099.14	gi|479325395|ref|YP_007865450.1|	-	2.4e-13	50.1	0.0	3.9e-13	49.5	0.0	1.3	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
Lip_prot_lig_C	PF10437.4	gi|479325395|ref|YP_007865450.1|	-	0.00062	19.3	0.1	0.0015	18.2	0.1	1.6	1	0	0	1	1	1	1	Bacterial	lipoate	protein	ligase	C-terminus
CoA_binding_2	PF13380.1	gi|479325396|ref|YP_007865451.1|	-	2.9e-35	120.9	0.1	3.4e-35	120.6	0.1	1.1	1	0	0	1	1	1	1	CoA	binding	domain
CoA_binding	PF02629.14	gi|479325396|ref|YP_007865451.1|	-	5.5e-06	26.7	0.0	8.8e-06	26.1	0.0	1.4	1	0	0	1	1	1	1	CoA	binding	domain
TrmB	PF01978.14	gi|479325397|ref|YP_007865452.1|	-	5e-10	38.9	0.1	6.7e-10	38.5	0.0	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.17	gi|479325397|ref|YP_007865452.1|	-	6e-07	29.0	0.1	8.5e-07	28.5	0.0	1.3	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.2	gi|479325397|ref|YP_007865452.1|	-	3.5e-06	26.5	0.0	4.7e-06	26.1	0.0	1.2	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.1	gi|479325397|ref|YP_007865452.1|	-	4.8e-06	26.7	0.0	6.9e-06	26.2	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_11	PF08279.7	gi|479325397|ref|YP_007865452.1|	-	5.2e-06	26.0	0.1	8.3e-06	25.3	0.1	1.3	1	0	0	1	1	1	1	HTH	domain
HTH_20	PF12840.2	gi|479325397|ref|YP_007865452.1|	-	5.1e-05	22.9	0.0	8e-05	22.3	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|479325397|ref|YP_007865452.1|	-	7.5e-05	22.3	0.1	0.00014	21.4	0.1	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.1	gi|479325397|ref|YP_007865452.1|	-	8e-05	21.9	0.2	0.00013	21.2	0.1	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
Fe_dep_repress	PF01325.14	gi|479325397|ref|YP_007865452.1|	-	0.0001	22.1	0.1	0.0002	21.1	0.0	1.5	1	1	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
RP-C	PF03428.8	gi|479325397|ref|YP_007865452.1|	-	0.00017	21.0	0.0	0.00071	19.0	0.0	1.9	1	1	0	1	1	1	1	Replication	protein	C	N-terminal	domain
HTH_36	PF13730.1	gi|479325397|ref|YP_007865452.1|	-	0.00039	20.4	0.1	0.00062	19.8	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
GntR	PF00392.16	gi|479325397|ref|YP_007865452.1|	-	0.00052	19.3	0.1	0.001	18.4	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HTH_Crp_2	PF13545.1	gi|479325397|ref|YP_007865452.1|	-	0.0011	18.7	0.0	0.0014	18.3	0.0	1.2	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
DUF4423	PF14394.1	gi|479325397|ref|YP_007865452.1|	-	0.0012	18.4	0.1	0.0024	17.4	0.0	1.5	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4423)
TFIIE_alpha	PF02002.12	gi|479325397|ref|YP_007865452.1|	-	0.0031	16.9	0.1	0.0037	16.7	0.1	1.2	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HrcA_DNA-bdg	PF03444.10	gi|479325397|ref|YP_007865452.1|	-	0.0064	15.8	0.1	0.009	15.4	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
FeoC	PF09012.5	gi|479325397|ref|YP_007865452.1|	-	0.0074	15.9	0.0	0.013	15.1	0.0	1.5	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
HTH_DeoR	PF08220.7	gi|479325397|ref|YP_007865452.1|	-	0.008	15.6	0.0	0.013	15.0	0.0	1.3	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
RuvB_C	PF05491.8	gi|479325397|ref|YP_007865452.1|	-	0.01	15.4	0.1	0.017	14.7	0.1	1.3	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	ruvB	C-terminus
Rio2_N	PF09202.6	gi|479325397|ref|YP_007865452.1|	-	0.014	15.4	0.0	0.019	15.0	0.0	1.4	1	0	0	1	1	1	0	Rio2,	N-terminal
EAP30	PF04157.11	gi|479325397|ref|YP_007865452.1|	-	0.015	14.4	0.1	0.02	14.0	0.1	1.2	1	0	0	1	1	1	0	EAP30/Vps36	family
HTH_10	PF04967.7	gi|479325397|ref|YP_007865452.1|	-	0.017	14.7	0.4	0.036	13.6	0.1	1.7	2	0	0	2	2	2	0	HTH	DNA	binding	domain
Rrf2	PF02082.15	gi|479325397|ref|YP_007865452.1|	-	0.021	14.9	0.0	0.032	14.3	0.0	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_IclR	PF09339.5	gi|479325397|ref|YP_007865452.1|	-	0.023	14.2	0.0	0.033	13.7	0.0	1.2	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
Phage_rep_O	PF04492.8	gi|479325397|ref|YP_007865452.1|	-	0.027	14.6	0.0	0.045	13.9	0.0	1.4	1	0	0	1	1	1	0	Bacteriophage	replication	protein	O
B-block_TFIIIC	PF04182.7	gi|479325397|ref|YP_007865452.1|	-	0.031	14.0	0.0	0.12	12.2	0.0	1.9	2	0	0	2	2	2	0	B-block	binding	subunit	of	TFIIIC
Phage_rep_org_N	PF09681.5	gi|479325397|ref|YP_007865452.1|	-	0.064	12.8	0.1	0.099	12.2	0.0	1.3	1	0	0	1	1	1	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
DUF387	PF04079.11	gi|479325397|ref|YP_007865452.1|	-	0.065	12.6	0.2	0.12	11.7	0.1	1.4	1	1	0	1	1	1	0	Putative	transcriptional	regulators	(Ypuh-like)
Pox_Rap94	PF03294.9	gi|479325397|ref|YP_007865452.1|	-	0.071	11.0	0.0	0.071	11.0	0.0	1.1	1	0	0	1	1	1	0	RNA	polymerase-associated	transcription	specificity	factor,	Rap94
DUF2250	PF10007.4	gi|479325397|ref|YP_007865452.1|	-	0.11	12.4	0.3	0.14	12.0	0.2	1.4	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_34	PF13601.1	gi|479325397|ref|YP_007865452.1|	-	0.11	12.4	0.2	0.2	11.7	0.1	1.4	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
DUF746	PF05344.6	gi|479325397|ref|YP_007865452.1|	-	0.13	11.8	0.0	0.2	11.2	0.0	1.3	1	0	0	1	1	1	0	Domain	of	Unknown	Function	(DUF746)
TusA	PF01206.12	gi|479325398|ref|YP_007865453.1|	-	9.1e-11	41.2	0.1	1.1e-10	41.0	0.1	1.1	1	0	0	1	1	1	1	Sulfurtransferase	TusA
YHS	PF04945.8	gi|479325399|ref|YP_007865454.1|	-	3.1e-08	33.3	0.4	3.8e-08	33.0	0.3	1.2	1	0	0	1	1	1	1	YHS	domain
zf-FCS	PF06467.9	gi|479325399|ref|YP_007865454.1|	-	0.12	12.0	0.6	0.18	11.4	0.4	1.3	1	0	0	1	1	1	0	MYM-type	Zinc	finger	with	FCS	sequence	motif
zf-C2HC_2	PF13913.1	gi|479325399|ref|YP_007865454.1|	-	0.21	11.3	0.1	0.21	11.3	0.1	1.9	2	0	0	2	2	2	0	zinc-finger	of	a	C2HC-type
TrmB	PF01978.14	gi|479325400|ref|YP_007865455.1|	-	4.2e-16	58.4	0.0	5.5e-16	58.0	0.0	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|479325400|ref|YP_007865455.1|	-	6.9e-12	44.8	0.0	9.1e-12	44.4	0.0	1.2	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.17	gi|479325400|ref|YP_007865455.1|	-	1.8e-10	40.3	0.0	2.5e-10	39.9	0.0	1.2	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.1	gi|479325400|ref|YP_007865455.1|	-	1.5e-07	30.6	0.0	2.1e-07	30.2	0.0	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_27	PF13463.1	gi|479325400|ref|YP_007865455.1|	-	1.6e-06	28.2	0.0	2.3e-06	27.8	0.0	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
TFIIE_alpha	PF02002.12	gi|479325400|ref|YP_007865455.1|	-	2.7e-06	26.8	0.0	3.4e-06	26.5	0.0	1.1	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HTH_5	PF01022.15	gi|479325400|ref|YP_007865455.1|	-	0.0001	21.8	0.0	0.00017	21.1	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_11	PF08279.7	gi|479325400|ref|YP_007865455.1|	-	0.00057	19.4	0.0	0.00093	18.7	0.0	1.4	1	0	0	1	1	1	1	HTH	domain
Fe_dep_repress	PF01325.14	gi|479325400|ref|YP_007865455.1|	-	0.0006	19.6	0.0	0.00093	19.0	0.0	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_IclR	PF09339.5	gi|479325400|ref|YP_007865455.1|	-	0.0006	19.3	0.0	0.00085	18.8	0.0	1.2	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
Mga	PF05043.8	gi|479325400|ref|YP_007865455.1|	-	0.00067	19.8	0.0	0.001	19.3	0.0	1.3	1	0	0	1	1	1	1	Mga	helix-turn-helix	domain
HTH_29	PF13551.1	gi|479325400|ref|YP_007865455.1|	-	0.0025	17.9	0.0	0.0031	17.6	0.0	1.1	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_20	PF12840.2	gi|479325400|ref|YP_007865455.1|	-	0.0031	17.2	0.0	0.0047	16.6	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_AsnC-type	PF13404.1	gi|479325400|ref|YP_007865455.1|	-	0.0039	16.7	0.0	0.0058	16.1	0.0	1.3	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
GntR	PF00392.16	gi|479325400|ref|YP_007865455.1|	-	0.006	16.0	0.0	0.011	15.1	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HTH_Crp_2	PF13545.1	gi|479325400|ref|YP_007865455.1|	-	0.0073	16.0	0.0	0.011	15.5	0.0	1.3	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_9	PF08221.6	gi|479325400|ref|YP_007865455.1|	-	0.0075	16.1	0.0	0.011	15.6	0.0	1.2	1	0	0	1	1	1	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
HTH_34	PF13601.1	gi|479325400|ref|YP_007865455.1|	-	0.0088	16.0	0.0	0.013	15.5	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
DUF4423	PF14394.1	gi|479325400|ref|YP_007865455.1|	-	0.01	15.3	0.0	0.014	14.9	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
Replic_Relax	PF13814.1	gi|479325400|ref|YP_007865455.1|	-	0.012	15.4	0.0	0.017	14.9	0.0	1.2	1	0	0	1	1	1	0	Replication-relaxation
HTH_36	PF13730.1	gi|479325400|ref|YP_007865455.1|	-	0.013	15.5	0.0	0.019	15.0	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
DUF2250	PF10007.4	gi|479325400|ref|YP_007865455.1|	-	0.016	15.0	0.0	0.03	14.2	0.0	1.4	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
RP-C	PF03428.8	gi|479325400|ref|YP_007865455.1|	-	0.033	13.6	0.1	1.1	8.6	0.1	2.0	1	1	0	1	1	1	0	Replication	protein	C	N-terminal	domain
Syntaxin-6_N	PF09177.6	gi|479325401|ref|YP_007865456.1|	-	0.06	13.7	0.2	0.19	12.1	0.1	1.8	1	1	0	1	1	1	0	Syntaxin	6,	N-terminal
DUF2971	PF11185.3	gi|479325401|ref|YP_007865456.1|	-	0.093	13.4	0.0	0.14	12.8	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2971)
DUF4319	PF14203.1	gi|479325401|ref|YP_007865456.1|	-	0.11	12.0	2.0	0.26	10.8	1.4	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4319)
HAD_2	PF13419.1	gi|479325402|ref|YP_007865457.1|	-	0.0025	18.0	0.0	0.003	17.7	0.0	1.2	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Sulfotransfer_1	PF00685.22	gi|479325402|ref|YP_007865457.1|	-	0.1	11.8	0.1	0.1	11.8	0.0	1.1	1	0	0	1	1	1	0	Sulfotransferase	domain
GCV_H	PF01597.14	gi|479325403|ref|YP_007865458.1|	-	9.6e-30	102.7	0.4	1.1e-29	102.5	0.3	1.0	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
Biotin_lipoyl	PF00364.17	gi|479325403|ref|YP_007865458.1|	-	0.013	15.0	0.2	0.02	14.5	0.1	1.3	1	0	0	1	1	1	0	Biotin-requiring	enzyme
UB2H	PF14814.1	gi|479325403|ref|YP_007865458.1|	-	0.022	14.4	0.0	0.088	12.5	0.0	1.9	2	0	0	2	2	2	0	Bifunctional	transglycosylase	second	domain
MFS_1	PF07690.11	gi|479325405|ref|YP_007865460.1|	-	5.4e-31	107.5	71.3	5.6e-24	84.5	22.1	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MoeA_C	PF03454.10	gi|479325406|ref|YP_007865461.1|	-	0.02	14.8	0.0	0.027	14.4	0.0	1.1	1	0	0	1	1	1	0	MoeA	C-terminal	region	(domain	IV)
Vps39_2	PF10367.4	gi|479325407|ref|YP_007865462.1|	-	0.015	15.4	1.6	0.018	15.1	1.1	1.1	1	0	0	1	1	1	0	Vacuolar	sorting	protein	39	domain	2
Chlam_vir	PF05475.6	gi|479325407|ref|YP_007865462.1|	-	0.019	14.1	0.1	0.021	13.9	0.1	1.1	1	0	0	1	1	1	0	Chlamydia	virulence	protein	PGP3-D
TrmB	PF01978.14	gi|479325408|ref|YP_007865463.1|	-	4.6e-15	55.0	0.3	8e-15	54.3	0.2	1.5	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
TFIIE_alpha	PF02002.12	gi|479325408|ref|YP_007865463.1|	-	6.6e-14	51.2	0.9	7.7e-14	51.0	0.7	1.1	1	0	0	1	1	1	1	TFIIE	alpha	subunit
MarR	PF01047.17	gi|479325408|ref|YP_007865463.1|	-	1.2e-11	44.0	0.1	2.1e-11	43.3	0.1	1.3	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.2	gi|479325408|ref|YP_007865463.1|	-	2e-11	43.3	0.0	3.1e-11	42.7	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.1	gi|479325408|ref|YP_007865463.1|	-	1.5e-09	37.0	0.6	2.6e-09	36.3	0.4	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_27	PF13463.1	gi|479325408|ref|YP_007865463.1|	-	1.6e-09	37.9	0.5	2.6e-09	37.2	0.1	1.5	2	0	0	2	2	1	1	Winged	helix	DNA-binding	domain
HTH_34	PF13601.1	gi|479325408|ref|YP_007865463.1|	-	7.6e-07	29.0	0.1	1.5e-06	28.1	0.1	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_DeoR	PF08220.7	gi|479325408|ref|YP_007865463.1|	-	1.8e-06	27.3	0.1	3.6e-06	26.4	0.1	1.5	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
HTH_5	PF01022.15	gi|479325408|ref|YP_007865463.1|	-	5.3e-06	25.9	0.3	9.5e-06	25.1	0.2	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
Fe_dep_repress	PF01325.14	gi|479325408|ref|YP_007865463.1|	-	3e-05	23.8	0.0	5.3e-05	23.0	0.0	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Penicillinase_R	PF03965.11	gi|479325408|ref|YP_007865463.1|	-	3.7e-05	23.7	0.3	5.5e-05	23.2	0.2	1.5	1	1	0	1	1	1	1	Penicillinase	repressor
HTH_11	PF08279.7	gi|479325408|ref|YP_007865463.1|	-	5.5e-05	22.7	0.1	9.1e-05	22.0	0.1	1.4	1	0	0	1	1	1	1	HTH	domain
HTH_Crp_2	PF13545.1	gi|479325408|ref|YP_007865463.1|	-	6.6e-05	22.6	0.0	0.00058	19.6	0.0	2.1	1	1	1	2	2	2	1	Crp-like	helix-turn-helix	domain
GntR	PF00392.16	gi|479325408|ref|YP_007865463.1|	-	7.6e-05	22.0	0.1	0.00056	19.3	0.0	2.1	2	1	0	2	2	2	1	Bacterial	regulatory	proteins,	gntR	family
HTH_20	PF12840.2	gi|479325408|ref|YP_007865463.1|	-	0.00055	19.6	0.0	0.0011	18.6	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_Mga	PF08280.6	gi|479325408|ref|YP_007865463.1|	-	0.00067	19.3	0.3	0.0012	18.5	0.2	1.4	1	0	0	1	1	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
EAP30	PF04157.11	gi|479325408|ref|YP_007865463.1|	-	0.0019	17.4	0.8	0.0069	15.5	0.0	1.9	2	0	0	2	2	2	1	EAP30/Vps36	family
DUF387	PF04079.11	gi|479325408|ref|YP_007865463.1|	-	0.0028	17.0	0.2	0.0042	16.4	0.1	1.4	1	1	0	1	1	1	1	Putative	transcriptional	regulators	(Ypuh-like)
HTH_19	PF12844.2	gi|479325408|ref|YP_007865463.1|	-	0.0029	17.6	0.2	0.006	16.6	0.1	1.8	1	1	0	1	1	1	1	Helix-turn-helix	domain
DUF4393	PF14337.1	gi|479325408|ref|YP_007865463.1|	-	0.0031	16.9	0.1	0.004	16.6	0.1	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4393)
Sulfolobus_pRN	PF05584.6	gi|479325408|ref|YP_007865463.1|	-	0.0036	17.2	0.1	0.007	16.3	0.1	1.5	1	0	0	1	1	1	1	Sulfolobus	plasmid	regulatory	protein
Replic_Relax	PF13814.1	gi|479325408|ref|YP_007865463.1|	-	0.0036	17.1	0.1	0.0041	17.0	0.0	1.1	1	0	0	1	1	1	1	Replication-relaxation
HTH_9	PF08221.6	gi|479325408|ref|YP_007865463.1|	-	0.0048	16.7	0.2	0.0099	15.7	0.2	1.4	1	0	0	1	1	1	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
HTH_AsnC-type	PF13404.1	gi|479325408|ref|YP_007865463.1|	-	0.0053	16.2	0.0	0.0089	15.5	0.0	1.5	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
FeoC	PF09012.5	gi|479325408|ref|YP_007865463.1|	-	0.0058	16.3	0.0	0.013	15.2	0.0	1.6	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
RuvB_C	PF05491.8	gi|479325408|ref|YP_007865463.1|	-	0.006	16.1	0.1	0.012	15.2	0.1	1.4	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	C-terminus
DUF977	PF06163.6	gi|479325408|ref|YP_007865463.1|	-	0.01	15.5	0.0	0.012	15.3	0.0	1.3	1	1	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF977)
Cullin_Nedd8	PF10557.4	gi|479325408|ref|YP_007865463.1|	-	0.011	15.4	0.1	0.025	14.3	0.0	1.6	2	0	0	2	2	1	0	Cullin	protein	neddylation	domain
z-alpha	PF02295.12	gi|479325408|ref|YP_007865463.1|	-	0.012	15.3	0.1	0.021	14.6	0.1	1.5	1	0	0	1	1	1	0	Adenosine	deaminase	z-alpha	domain
DUF4423	PF14394.1	gi|479325408|ref|YP_007865463.1|	-	0.013	15.0	0.3	0.022	14.3	0.2	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
HxlR	PF01638.12	gi|479325408|ref|YP_007865463.1|	-	0.018	14.6	0.1	0.031	13.8	0.1	1.3	1	1	0	1	1	1	0	HxlR-like	helix-turn-helix
CHD5	PF04420.9	gi|479325408|ref|YP_007865463.1|	-	0.02	14.5	0.6	0.027	14.1	0.4	1.1	1	0	0	1	1	1	0	CHD5-like	protein
B-block_TFIIIC	PF04182.7	gi|479325408|ref|YP_007865463.1|	-	0.024	14.4	0.0	0.051	13.4	0.0	1.4	1	1	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
HTH_36	PF13730.1	gi|479325408|ref|YP_007865463.1|	-	0.025	14.6	0.2	0.057	13.5	0.2	1.7	1	1	0	1	1	1	0	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|479325408|ref|YP_007865463.1|	-	0.026	14.6	0.1	0.044	13.8	0.1	1.4	1	0	0	1	1	1	0	Transcriptional	regulator
Phage_rep_org_N	PF09681.5	gi|479325408|ref|YP_007865463.1|	-	0.029	13.9	0.1	0.047	13.2	0.0	1.3	1	0	0	1	1	1	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
HTH_10	PF04967.7	gi|479325408|ref|YP_007865463.1|	-	0.039	13.5	0.0	0.18	11.3	0.0	2.0	2	0	0	2	2	2	0	HTH	DNA	binding	domain
Cullin	PF00888.17	gi|479325408|ref|YP_007865463.1|	-	0.04	12.4	0.9	0.11	11.0	0.2	1.7	1	1	1	2	2	2	0	Cullin	family
HTH_IclR	PF09339.5	gi|479325408|ref|YP_007865463.1|	-	0.042	13.4	0.0	0.074	12.6	0.0	1.4	1	1	0	1	1	1	0	IclR	helix-turn-helix	domain
DUF2250	PF10007.4	gi|479325408|ref|YP_007865463.1|	-	0.043	13.7	0.6	0.07	13.0	0.2	1.4	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_38	PF13936.1	gi|479325408|ref|YP_007865463.1|	-	0.059	12.9	0.0	0.14	11.6	0.0	1.7	1	1	0	1	1	1	0	Helix-turn-helix	domain
DUF2551	PF10826.3	gi|479325408|ref|YP_007865463.1|	-	0.06	13.2	0.0	0.1	12.5	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2551)
RPA_C	PF08784.6	gi|479325408|ref|YP_007865463.1|	-	0.083	13.3	0.1	0.15	12.5	0.0	1.5	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
PadR	PF03551.9	gi|479325408|ref|YP_007865463.1|	-	0.1	12.3	0.2	0.21	11.3	0.1	1.7	1	1	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
Arc_trans_TRASH	PF08394.5	gi|479325409|ref|YP_007865464.1|	-	9e-06	25.7	0.8	1.1e-05	25.4	0.5	1.2	1	0	0	1	1	1	1	Archaeal	TRASH	domain
zf-FCS	PF06467.9	gi|479325409|ref|YP_007865464.1|	-	9.3e-06	25.1	2.4	1.4e-05	24.5	1.6	1.2	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
YHS	PF04945.8	gi|479325409|ref|YP_007865464.1|	-	0.001	18.8	0.9	0.0014	18.4	0.7	1.2	1	0	0	1	1	1	1	YHS	domain
A2L_zn_ribbon	PF08792.5	gi|479325409|ref|YP_007865464.1|	-	0.0041	16.5	0.7	0.016	14.6	0.5	1.8	1	1	0	1	1	1	1	A2L	zinc	ribbon	domain
DUF329	PF03884.9	gi|479325409|ref|YP_007865464.1|	-	0.016	14.7	2.2	0.034	13.6	1.5	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF329)
zf-MYND	PF01753.13	gi|479325409|ref|YP_007865464.1|	-	0.039	13.8	0.0	0.056	13.3	0.0	1.3	1	1	0	1	1	1	0	MYND	finger
zf-dskA_traR	PF01258.12	gi|479325409|ref|YP_007865464.1|	-	0.056	13.1	0.2	0.056	13.1	0.2	1.5	2	0	0	2	2	2	0	Prokaryotic	dksA/traR	C4-type	zinc	finger
DUF581	PF04570.9	gi|479325409|ref|YP_007865464.1|	-	0.079	12.2	0.5	0.093	12.0	0.3	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF581)
FANCL_C	PF11793.3	gi|479325409|ref|YP_007865464.1|	-	0.099	12.6	1.4	6	6.9	0.0	2.1	2	0	0	2	2	2	0	FANCL	C-terminal	domain
zinc_ribbon_2	PF13240.1	gi|479325409|ref|YP_007865464.1|	-	0.16	11.4	0.3	0.16	11.4	0.2	1.9	2	0	0	2	2	2	0	zinc-ribbon	domain
Nudix_N_2	PF14803.1	gi|479325409|ref|YP_007865464.1|	-	0.35	10.5	0.3	0.35	10.5	0.2	1.9	3	0	0	3	3	3	0	Nudix	N-terminal
RPAP2_Rtr1	PF04181.8	gi|479325409|ref|YP_007865464.1|	-	0.67	10.0	3.1	1.3	9.1	2.1	1.6	1	1	0	1	1	1	0	Rtr1/RPAP2	family
DNA_topoisoIV	PF00521.15	gi|479325410|ref|YP_007865465.1|	-	0.0011	17.9	2.9	0.0011	17.8	2.0	1.0	1	0	0	1	1	1	1	DNA	gyrase/topoisomerase	IV,	subunit	A
YqzE	PF14038.1	gi|479325410|ref|YP_007865465.1|	-	4.3	7.1	7.1	0.47	10.2	1.4	1.9	2	0	0	2	2	2	0	YqzE-like	protein
FUN14	PF04930.10	gi|479325411|ref|YP_007865466.1|	-	0.036	14.3	11.0	0.34	11.1	7.7	2.0	1	1	0	1	1	1	0	FUN14	family
Oxidored_q2	PF00420.19	gi|479325411|ref|YP_007865466.1|	-	0.1	12.1	10.6	0.14	11.7	7.4	1.3	1	1	0	1	1	1	0	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
DUF2798	PF11391.3	gi|479325411|ref|YP_007865466.1|	-	0.12	12.1	5.4	0.13	12.0	0.1	2.7	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2798)
YuiB	PF14068.1	gi|479325411|ref|YP_007865466.1|	-	0.15	12.4	10.5	0.24	11.7	7.3	1.3	1	1	0	1	1	1	0	Putative	membrane	protein
O-antigen_lig	PF13425.1	gi|479325411|ref|YP_007865466.1|	-	0.21	11.5	10.4	0.28	11.1	7.2	1.3	1	1	0	1	1	1	0	O-antigen	ligase	like	membrane	protein
DUF4131	PF13567.1	gi|479325411|ref|YP_007865466.1|	-	0.46	9.8	2.3	0.51	9.7	1.6	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
ABC2_membrane_4	PF12730.2	gi|479325411|ref|YP_007865466.1|	-	0.78	8.8	17.4	0.94	8.5	12.0	1.1	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
Bax1-I	PF01027.15	gi|479325411|ref|YP_007865466.1|	-	1	8.9	12.1	1.8	8.1	8.4	1.4	1	1	0	1	1	1	0	Inhibitor	of	apoptosis-promoting	Bax1
DUF1616	PF07760.6	gi|479325411|ref|YP_007865466.1|	-	1.2	8.2	12.2	1.4	7.9	8.5	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1616)
DUF1275	PF06912.6	gi|479325411|ref|YP_007865466.1|	-	1.2	8.3	8.3	0.99	8.5	4.2	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1275)
ABC2_membrane_3	PF12698.2	gi|479325411|ref|YP_007865466.1|	-	1.8	7.5	13.7	2.2	7.2	9.5	1.1	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
MtrC	PF04211.8	gi|479325411|ref|YP_007865466.1|	-	2.3	7.2	12.1	1.9	7.4	7.0	1.8	1	1	0	1	1	1	0	Tetrahydromethanopterin	S-methyltransferase,	subunit	C
TatC	PF00902.13	gi|479325411|ref|YP_007865466.1|	-	2.7	7.3	14.7	0.49	9.7	0.7	2.9	2	1	1	3	3	3	0	Sec-independent	protein	translocase	protein	(TatC)
PrgI	PF12666.2	gi|479325411|ref|YP_007865466.1|	-	4.2	7.5	9.9	0.32	11.1	3.2	1.7	1	1	0	2	2	2	0	PrgI	family	protein
DUF1097	PF06496.6	gi|479325411|ref|YP_007865466.1|	-	4.7	7.0	9.4	6.9	6.4	6.5	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1097)
SdpI	PF13630.1	gi|479325411|ref|YP_007865466.1|	-	8.8	6.1	20.2	21	4.9	0.2	2.2	2	0	0	2	2	2	0	SdpI/YhfL	protein	family
DUF2258	PF10015.4	gi|479325412|ref|YP_007865467.1|	-	6.1e-32	109.2	1.8	6.1e-32	109.2	1.3	2.1	2	0	0	2	2	2	1	Uncharacterized	protein	conserved	in	archaea	(DUF2258)
DivIVA	PF05103.8	gi|479325412|ref|YP_007865467.1|	-	0.00035	20.6	4.7	0.028	14.4	0.9	2.4	2	1	0	2	2	2	2	DivIVA	protein
Uso1_p115_C	PF04871.8	gi|479325412|ref|YP_007865467.1|	-	0.0027	17.6	5.8	0.23	11.3	3.1	2.1	1	1	1	2	2	2	1	Uso1	/	p115	like	vesicle	tethering	protein,	C	terminal	region
Nnf1	PF03980.9	gi|479325412|ref|YP_007865467.1|	-	0.0055	16.6	2.9	0.031	14.2	0.8	2.3	1	1	1	2	2	2	1	Nnf1
TPR_MLP1_2	PF07926.7	gi|479325412|ref|YP_007865467.1|	-	0.032	13.9	1.8	0.032	13.9	1.2	2.3	3	0	0	3	3	3	0	TPR/MLP1/MLP2-like	protein
HALZ	PF02183.13	gi|479325412|ref|YP_007865467.1|	-	0.032	13.9	1.7	0.083	12.6	1.2	1.7	1	0	0	1	1	1	0	Homeobox	associated	leucine	zipper
Kinesin-related	PF06548.6	gi|479325412|ref|YP_007865467.1|	-	0.17	10.3	7.6	0.17	10.3	2.7	1.9	1	1	1	2	2	2	0	Kinesin-related
PUB	PF09409.5	gi|479325412|ref|YP_007865467.1|	-	0.19	11.5	3.4	0.12	12.1	1.2	1.6	2	0	0	2	2	2	0	PUB	domain
AATF-Che1	PF13339.1	gi|479325412|ref|YP_007865467.1|	-	0.31	11.2	3.8	1.7	8.8	0.5	2.3	1	1	1	2	2	2	0	Apoptosis	antagonizing	transcription	factor
Flu_B_M2	PF04772.7	gi|479325412|ref|YP_007865467.1|	-	0.38	10.8	2.4	1.6	8.8	0.5	2.1	1	1	1	2	2	2	0	Influenza	B	matrix	protein	2	(BM2)
DUF2175	PF09943.4	gi|479325412|ref|YP_007865467.1|	-	0.38	10.8	4.6	0.39	10.7	1.9	1.9	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2175)
TMF_TATA_bd	PF12325.3	gi|479325412|ref|YP_007865467.1|	-	0.71	9.6	7.7	1.6	8.4	2.8	2.5	2	1	0	2	2	2	0	TATA	element	modulatory	factor	1	TATA	binding
Kinetocho_Slk19	PF12709.2	gi|479325412|ref|YP_007865467.1|	-	1.4	9.0	7.2	0.65	10.1	0.7	2.7	3	1	0	3	3	3	0	Central	kinetochore-associated
DUF904	PF06005.7	gi|479325412|ref|YP_007865467.1|	-	3.5	7.9	9.6	2.3	8.5	4.4	2.5	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF904)
Pox_A_type_inc	PF04508.7	gi|479325412|ref|YP_007865467.1|	-	3.8	7.5	13.6	0.65	9.9	2.3	3.4	3	0	0	3	3	3	0	Viral	A-type	inclusion	protein	repeat
NTP_transf_2	PF01909.18	gi|479325413|ref|YP_007865468.1|	-	0.015	15.5	0.0	0.034	14.4	0.0	1.6	1	0	0	1	1	1	0	Nucleotidyltransferase	domain
Aconitase	PF00330.15	gi|479325414|ref|YP_007865469.1|	-	1.9e-125	418.9	0.0	3.8e-125	418.0	0.0	1.4	2	0	0	2	2	2	1	Aconitase	family	(aconitate	hydratase)
Aconitase_C	PF00694.14	gi|479325414|ref|YP_007865469.1|	-	5e-33	114.0	0.0	1e-32	112.9	0.0	1.5	1	0	0	1	1	1	1	Aconitase	C-terminal	domain
DUF402	PF04167.8	gi|479325415|ref|YP_007865470.1|	-	5e-18	64.6	2.3	9.9e-18	63.7	1.6	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF402)
RNase_E_G	PF10150.4	gi|479325415|ref|YP_007865470.1|	-	1.4e-05	24.4	0.0	2.7e-05	23.5	0.0	1.5	1	0	0	1	1	1	1	Ribonuclease	E/G	family
RVT_2	PF07727.9	gi|479325416|ref|YP_007865471.1|	-	0.061	12.2	0.5	0.078	11.9	0.4	1.3	1	0	0	1	1	1	0	Reverse	transcriptase	(RNA-dependent	DNA	polymerase)
VWA_2	PF13519.1	gi|479325417|ref|YP_007865472.1|	-	1.4e-13	51.3	0.2	5.4e-13	49.4	0.0	2.0	2	0	0	2	2	2	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.23	gi|479325417|ref|YP_007865472.1|	-	1.4e-12	47.6	1.5	2.3e-12	47.0	0.1	1.9	2	0	0	2	2	2	1	von	Willebrand	factor	type	A	domain
VWA_3	PF13768.1	gi|479325417|ref|YP_007865472.1|	-	2.6e-05	23.9	0.0	0.0001	22.0	0.0	1.9	2	0	0	2	2	2	1	von	Willebrand	factor	type	A	domain
vWA-TerF-like	PF10138.4	gi|479325417|ref|YP_007865472.1|	-	0.0056	16.5	0.4	0.055	13.2	0.0	2.5	2	1	1	3	3	3	1	vWA	found	in	TerF	C	terminus
IZUMO	PF15005.1	gi|479325417|ref|YP_007865472.1|	-	0.35	10.9	1.7	1.2	9.1	0.5	2.0	2	0	0	2	2	2	0	Izumo	sperm-egg	fusion
Metallophos	PF00149.23	gi|479325418|ref|YP_007865473.1|	-	2.1e-25	89.3	0.5	2.5e-25	89.0	0.4	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|479325418|ref|YP_007865473.1|	-	1.1e-07	31.8	0.0	1.3e-07	31.6	0.0	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
FHA	PF00498.21	gi|479325419|ref|YP_007865474.1|	-	2.1e-18	66.1	0.0	3.6e-18	65.4	0.0	1.3	1	0	0	1	1	1	1	FHA	domain
zf-ribbon_3	PF13248.1	gi|479325419|ref|YP_007865474.1|	-	6.1e-07	28.4	1.0	1.1e-06	27.6	0.7	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|479325419|ref|YP_007865474.1|	-	2.5e-06	26.7	3.5	4.1e-06	26.0	2.4	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-RanBP	PF00641.13	gi|479325419|ref|YP_007865474.1|	-	6e-06	25.2	1.3	9.2e-06	24.6	0.9	1.3	1	0	0	1	1	1	1	Zn-finger	in	Ran	binding	protein	and	others
DZR	PF12773.2	gi|479325419|ref|YP_007865474.1|	-	9.5e-05	22.1	2.2	0.00015	21.4	1.5	1.4	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-tcix	PF14952.1	gi|479325419|ref|YP_007865474.1|	-	0.06	12.6	1.0	0.13	11.6	0.7	1.5	1	1	0	1	1	1	0	Putative	treble-clef,	zinc-finger,	Zn-binding
DUF2318	PF10080.4	gi|479325419|ref|YP_007865474.1|	-	0.12	12.1	0.4	0.22	11.2	0.3	1.4	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2318)
Prok-RING_1	PF14446.1	gi|479325419|ref|YP_007865474.1|	-	0.12	12.0	1.1	0.19	11.4	0.8	1.2	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
FYDLN_acid	PF09538.5	gi|479325419|ref|YP_007865474.1|	-	0.38	11.3	3.6	0.75	10.3	2.5	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(FYDLN_acid)
PAT1	PF09770.4	gi|479325419|ref|YP_007865474.1|	-	0.38	8.9	13.6	0.45	8.6	9.5	1.0	1	0	0	1	1	1	0	Topoisomerase	II-associated	protein	PAT1
A2L_zn_ribbon	PF08792.5	gi|479325419|ref|YP_007865474.1|	-	0.94	9.0	4.3	5.4	6.6	3.0	2.1	1	1	0	1	1	1	0	A2L	zinc	ribbon	domain
Rubredoxin	PF00301.15	gi|479325419|ref|YP_007865474.1|	-	7.4	6.5	7.5	2.7	7.9	1.3	2.8	2	1	2	4	4	4	0	Rubredoxin
VWA_2	PF13519.1	gi|479325420|ref|YP_007865475.1|	-	5.4e-17	62.4	0.0	1.2e-15	57.9	0.0	2.3	1	1	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.23	gi|479325420|ref|YP_007865475.1|	-	6.9e-15	55.2	0.1	1.9e-14	53.7	0.1	1.7	1	1	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA_3	PF13768.1	gi|479325420|ref|YP_007865475.1|	-	8.7e-09	35.2	0.0	5.1e-07	29.5	0.0	2.8	2	1	0	2	2	2	1	von	Willebrand	factor	type	A	domain
vWA-TerF-like	PF10138.4	gi|479325420|ref|YP_007865475.1|	-	0.00085	19.2	0.0	0.0091	15.8	0.0	2.4	2	1	0	2	2	2	1	vWA	found	in	TerF	C	terminus
CobT_C	PF11775.3	gi|479325420|ref|YP_007865475.1|	-	0.065	12.6	0.0	0.25	10.7	0.0	1.9	2	0	0	2	2	2	0	Cobalamin	biosynthesis	protein	CobT	VWA	domain
tRNA_m1G_MT	PF01746.16	gi|479325421|ref|YP_007865476.1|	-	1.8e-25	89.6	0.4	3.8e-25	88.5	0.2	1.6	1	0	0	1	1	1	1	tRNA	(Guanine-1)-methyltransferase
DUF1533	PF07550.6	gi|479325421|ref|YP_007865476.1|	-	0.037	14.0	6.4	0.29	11.1	0.2	3.3	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1533)
LemA	PF04011.7	gi|479325422|ref|YP_007865477.1|	-	0.0086	15.1	0.2	0.0092	15.1	0.1	1.1	1	0	0	1	1	1	1	LemA	family
CoA_trans	PF01144.18	gi|479325423|ref|YP_007865478.1|	-	3.6e-33	114.5	0.0	4.1e-33	114.3	0.0	1.0	1	0	0	1	1	1	1	Coenzyme	A	transferase
DUF3625	PF12293.3	gi|479325423|ref|YP_007865478.1|	-	0.021	13.9	0.0	0.04	13.0	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3625)
CoA_trans	PF01144.18	gi|479325424|ref|YP_007865479.1|	-	2e-26	92.5	0.1	2.2e-26	92.3	0.0	1.0	1	0	0	1	1	1	1	Coenzyme	A	transferase
AcetylCoA_hydro	PF02550.10	gi|479325424|ref|YP_007865479.1|	-	0.074	12.8	0.1	0.37	10.5	0.0	1.9	2	0	0	2	2	2	0	Acetyl-CoA	hydrolase/transferase	N-terminal	domain
MarR	PF01047.17	gi|479325425|ref|YP_007865480.1|	-	1.6e-13	50.1	0.1	3e-13	49.2	0.0	1.5	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.2	gi|479325425|ref|YP_007865480.1|	-	1.4e-09	37.4	0.0	2.1e-09	36.9	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.1	gi|479325425|ref|YP_007865480.1|	-	8.3e-09	35.6	0.0	1.6e-08	34.7	0.0	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_34	PF13601.1	gi|479325425|ref|YP_007865480.1|	-	6.7e-06	26.0	0.1	1.1e-05	25.3	0.1	1.4	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
Penicillinase_R	PF03965.11	gi|479325425|ref|YP_007865480.1|	-	1.1e-05	25.4	1.5	8.1e-05	22.6	1.0	2.1	1	1	0	1	1	1	1	Penicillinase	repressor
TrmB	PF01978.14	gi|479325425|ref|YP_007865480.1|	-	4.2e-05	23.1	0.5	8.2e-05	22.2	0.3	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|479325425|ref|YP_007865480.1|	-	9.9e-05	21.6	0.0	0.00023	20.4	0.0	1.7	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_45	PF14947.1	gi|479325425|ref|YP_007865480.1|	-	0.0033	17.2	0.3	0.0091	15.7	0.1	1.9	1	1	0	1	1	1	1	Winged	helix-turn-helix
HxlR	PF01638.12	gi|479325425|ref|YP_007865480.1|	-	0.0041	16.7	1.9	0.041	13.5	0.5	2.5	1	1	2	3	3	3	1	HxlR-like	helix-turn-helix
Rrf2	PF02082.15	gi|479325425|ref|YP_007865480.1|	-	0.0077	16.3	0.1	0.052	13.6	0.0	2.1	2	0	0	2	2	2	1	Transcriptional	regulator
PadR	PF03551.9	gi|479325425|ref|YP_007865480.1|	-	0.01	15.5	0.3	0.024	14.3	0.2	1.6	1	1	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
TFIIE_alpha	PF02002.12	gi|479325425|ref|YP_007865480.1|	-	0.067	12.7	0.2	0.067	12.7	0.2	2.5	2	1	1	3	3	3	0	TFIIE	alpha	subunit
Rio2_N	PF09202.6	gi|479325425|ref|YP_007865480.1|	-	0.095	12.7	0.1	0.24	11.5	0.0	1.7	1	0	0	1	1	1	0	Rio2,	N-terminal
DUF501	PF04417.7	gi|479325425|ref|YP_007865480.1|	-	0.15	11.9	0.1	0.2	11.4	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF501)
MacB_PCD	PF12704.2	gi|479325426|ref|YP_007865481.1|	-	1.7e-25	89.9	1.3	1.7e-25	89.9	0.9	2.3	2	0	0	2	2	2	1	MacB-like	periplasmic	core	domain
FtsX	PF02687.16	gi|479325426|ref|YP_007865481.1|	-	4.7e-20	71.5	19.6	1.7e-19	69.7	7.9	2.5	2	0	0	2	2	2	2	FtsX-like	permease	family
Phage_holin_1	PF04531.8	gi|479325426|ref|YP_007865481.1|	-	3.5	7.7	7.0	21	5.2	0.0	3.4	2	1	1	3	3	3	0	Bacteriophage	holin
NPCBM_assoc	PF10633.4	gi|479325427|ref|YP_007865482.1|	-	3.1e-11	43.1	0.9	0.0089	16.0	0.0	5.3	5	0	0	5	5	5	3	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
Rifin_STEVOR	PF02009.11	gi|479325427|ref|YP_007865482.1|	-	0.034	13.7	3.7	0.054	13.1	2.6	1.3	1	0	0	1	1	1	0	Rifin/stevor	family
ABC_tran	PF00005.22	gi|479325428|ref|YP_007865483.1|	-	1.7e-33	115.8	0.1	2.6e-33	115.2	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|479325428|ref|YP_007865483.1|	-	7.8e-12	45.7	2.3	1.9e-06	28.0	0.1	2.1	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|479325428|ref|YP_007865483.1|	-	1.7e-06	27.4	1.0	7.8e-06	25.2	0.7	1.8	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|479325428|ref|YP_007865483.1|	-	0.00033	20.1	0.1	0.00055	19.4	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.1	gi|479325428|ref|YP_007865483.1|	-	0.00036	20.5	0.2	0.00061	19.8	0.1	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_15	PF13175.1	gi|479325428|ref|YP_007865483.1|	-	0.00094	18.3	4.8	0.029	13.4	0.5	2.2	1	1	0	2	2	2	2	AAA	ATPase	domain
Arch_ATPase	PF01637.13	gi|479325428|ref|YP_007865483.1|	-	0.0033	17.1	0.5	0.0061	16.2	0.4	1.7	1	1	0	1	1	1	1	Archaeal	ATPase
AAA_18	PF13238.1	gi|479325428|ref|YP_007865483.1|	-	0.0037	17.5	0.6	0.016	15.4	0.4	2.1	1	1	0	1	1	1	1	AAA	domain
SbcCD_C	PF13558.1	gi|479325428|ref|YP_007865483.1|	-	0.0043	16.9	0.0	0.028	14.3	0.0	2.1	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_25	PF13481.1	gi|479325428|ref|YP_007865483.1|	-	0.0058	16.0	0.0	0.02	14.3	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
DUF258	PF03193.11	gi|479325428|ref|YP_007865483.1|	-	0.0062	15.7	0.0	0.0099	15.0	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_22	PF13401.1	gi|479325428|ref|YP_007865483.1|	-	0.03	14.4	0.0	0.15	12.1	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
AAA_17	PF13207.1	gi|479325428|ref|YP_007865483.1|	-	0.031	15.0	0.9	0.064	14.0	0.6	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|479325428|ref|YP_007865483.1|	-	0.042	13.2	0.3	0.053	12.9	0.2	1.4	1	1	0	1	1	1	0	AAA-like	domain
AAA_23	PF13476.1	gi|479325428|ref|YP_007865483.1|	-	0.052	13.8	0.3	0.052	13.8	0.2	2.0	2	1	0	2	2	2	0	AAA	domain
T2SE	PF00437.15	gi|479325428|ref|YP_007865483.1|	-	0.061	12.2	0.2	0.21	10.4	0.0	1.8	1	1	1	2	2	2	0	Type	II/IV	secretion	system	protein
DUF4388	PF14332.1	gi|479325428|ref|YP_007865483.1|	-	0.14	12.0	0.0	0.41	10.5	0.0	1.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4388)
YopX	PF09643.5	gi|479325428|ref|YP_007865483.1|	-	0.15	12.0	0.7	0.29	11.0	0.1	1.7	2	0	0	2	2	2	0	YopX	protein
MMR_HSR1	PF01926.18	gi|479325428|ref|YP_007865483.1|	-	0.27	11.1	1.3	0.93	9.4	0.9	2.0	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
Lyase_1	PF00206.15	gi|479325429|ref|YP_007865484.1|	-	1.5e-108	362.7	0.0	2.4e-108	362.0	0.0	1.3	1	0	0	1	1	1	1	Lyase
FumaraseC_C	PF10415.4	gi|479325429|ref|YP_007865484.1|	-	3.9e-12	46.0	0.0	9.5e-12	44.8	0.0	1.7	1	0	0	1	1	1	1	Fumarase	C	C-terminus
RuvA_C	PF07499.8	gi|479325429|ref|YP_007865484.1|	-	0.023	14.8	0.0	0.15	12.2	0.0	2.4	2	0	0	2	2	2	0	RuvA,	C-terminal	domain
NUMOD1	PF07453.8	gi|479325429|ref|YP_007865484.1|	-	0.05	13.4	0.4	0.33	10.8	0.0	2.3	2	0	0	2	2	2	0	NUMOD1	domain
CBS	PF00571.23	gi|479325431|ref|YP_007865486.1|	-	6.9e-29	99.3	0.3	6.1e-14	51.5	0.0	2.0	2	0	0	2	2	2	2	CBS	domain
PHP	PF02811.14	gi|479325431|ref|YP_007865486.1|	-	0.059	13.1	0.0	0.06	13.1	0.0	1.1	1	0	0	1	1	1	0	PHP	domain
DSBA	PF01323.15	gi|479325432|ref|YP_007865487.1|	-	1.1e-22	80.4	0.6	1.1e-21	77.2	0.4	1.9	1	1	0	1	1	1	1	DSBA-like	thioredoxin	domain
Thioredoxin_5	PF13743.1	gi|479325432|ref|YP_007865487.1|	-	6.7e-19	68.1	0.0	2.2e-18	66.4	0.0	1.6	1	1	0	1	1	1	1	Thioredoxin
Thioredoxin_4	PF13462.1	gi|479325432|ref|YP_007865487.1|	-	2.5e-09	37.3	0.5	1.2e-06	28.6	0.0	2.1	1	1	1	2	2	2	2	Thioredoxin
Thioredoxin_2	PF13098.1	gi|479325432|ref|YP_007865487.1|	-	0.00024	21.2	0.0	0.53	10.4	0.0	2.2	2	0	0	2	2	2	2	Thioredoxin-like	domain
Thioredoxin_3	PF13192.1	gi|479325432|ref|YP_007865487.1|	-	0.00033	20.3	0.2	0.0061	16.3	0.0	2.6	2	1	1	3	3	3	1	Thioredoxin	domain
TipAS	PF07739.8	gi|479325432|ref|YP_007865487.1|	-	0.052	13.8	0.1	0.14	12.4	0.0	1.7	2	1	0	2	2	2	0	TipAS	antibiotic-recognition	domain
AA_permease_2	PF13520.1	gi|479325433|ref|YP_007865488.1|	-	2.1e-44	151.7	58.6	2.1e-44	151.7	40.6	2.3	1	1	0	2	2	2	1	Amino	acid	permease
AA_permease	PF00324.16	gi|479325433|ref|YP_007865488.1|	-	8.7e-33	113.3	60.6	8.7e-33	113.3	42.0	2.2	1	1	1	2	2	2	1	Amino	acid	permease
DJ-1_PfpI	PF01965.19	gi|479325434|ref|YP_007865489.1|	-	1.6e-37	128.2	0.0	1.9e-37	127.9	0.0	1.1	1	0	0	1	1	1	1	DJ-1/PfpI	family
DUF4066	PF13278.1	gi|479325434|ref|YP_007865489.1|	-	1.5e-08	34.1	0.0	2e-08	33.7	0.0	1.1	1	0	0	1	1	1	1	Putative	amidotransferase
GATase	PF00117.23	gi|479325434|ref|YP_007865489.1|	-	0.00038	19.9	0.0	0.00045	19.7	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
GATase_5	PF13507.1	gi|479325434|ref|YP_007865489.1|	-	0.044	12.6	0.0	0.27	10.1	0.0	1.9	1	1	0	1	1	1	0	CobB/CobQ-like	glutamine	amidotransferase	domain
GATase_3	PF07685.9	gi|479325434|ref|YP_007865489.1|	-	0.078	12.5	0.0	0.11	12.1	0.0	1.2	1	0	0	1	1	1	0	CobB/CobQ-like	glutamine	amidotransferase	domain
HTH_1	PF00126.22	gi|479325435|ref|YP_007865490.1|	-	2.7e-05	23.8	0.0	4.5e-05	23.0	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
Nsp1_C	PF05064.8	gi|479325435|ref|YP_007865490.1|	-	0.00046	19.8	0.7	0.00067	19.2	0.5	1.2	1	0	0	1	1	1	1	Nsp1-like	C-terminal	region
MutS_IV	PF05190.13	gi|479325435|ref|YP_007865490.1|	-	0.019	15.1	1.4	0.034	14.3	0.9	1.4	1	0	0	1	1	1	0	MutS	family	domain	IV
HTH_28	PF13518.1	gi|479325435|ref|YP_007865490.1|	-	0.075	13.0	0.2	0.16	12.0	0.0	1.6	2	0	0	2	2	2	0	Helix-turn-helix	domain
CAT	PF00302.13	gi|479325435|ref|YP_007865490.1|	-	0.13	11.8	0.0	0.16	11.5	0.0	1.1	1	0	0	1	1	1	0	Chloramphenicol	acetyltransferase
ATP-grasp	PF02222.17	gi|479325436|ref|YP_007865491.1|	-	5.7e-50	169.0	0.0	1.1e-49	168.1	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_3	PF02655.9	gi|479325436|ref|YP_007865491.1|	-	3.8e-05	23.6	0.1	6.3e-05	22.8	0.1	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|479325436|ref|YP_007865491.1|	-	0.00014	21.6	0.2	0.00071	19.3	0.0	2.1	1	1	1	2	2	2	1	ATP-grasp	domain
GARS_A	PF01071.14	gi|479325436|ref|YP_007865491.1|	-	0.00088	18.8	0.0	0.0024	17.4	0.0	1.7	1	1	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
Uso1_p115_C	PF04871.8	gi|479325436|ref|YP_007865491.1|	-	0.1	12.5	0.4	1.3	8.9	0.0	2.1	2	0	0	2	2	2	0	Uso1	/	p115	like	vesicle	tethering	protein,	C	terminal	region
AIRC	PF00731.15	gi|479325437|ref|YP_007865492.1|	-	1.3e-66	222.5	0.1	1.4e-66	222.4	0.1	1.0	1	0	0	1	1	1	1	AIR	carboxylase
Glutaredoxin	PF00462.19	gi|479325437|ref|YP_007865492.1|	-	0.025	14.5	0.0	0.047	13.6	0.0	1.5	1	0	0	1	1	1	0	Glutaredoxin
PrpR_N	PF06506.6	gi|479325437|ref|YP_007865492.1|	-	0.026	13.9	0.1	0.039	13.3	0.0	1.5	1	0	0	1	1	1	0	Propionate	catabolism	activator
DUF4419	PF14388.1	gi|479325437|ref|YP_007865492.1|	-	0.081	12.1	0.1	0.16	11.1	0.0	1.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4419)
Radical_SAM	PF04055.16	gi|479325437|ref|YP_007865492.1|	-	0.083	13.0	0.0	1.2	9.2	0.0	2.1	1	1	1	2	2	2	0	Radical	SAM	superfamily
Fe-ADH	PF00465.14	gi|479325437|ref|YP_007865492.1|	-	0.091	11.3	0.0	0.15	10.6	0.0	1.3	1	0	0	1	1	1	0	Iron-containing	alcohol	dehydrogenase
FAD_binding_4	PF01565.18	gi|479325438|ref|YP_007865493.1|	-	1.3e-10	40.8	0.0	1.9e-10	40.3	0.0	1.2	1	0	0	1	1	1	1	FAD	binding	domain
HTH_34	PF13601.1	gi|479325439|ref|YP_007865494.1|	-	1.5e-07	31.3	0.2	2e-07	30.9	0.2	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR	PF01047.17	gi|479325439|ref|YP_007865494.1|	-	1.9e-07	30.6	0.1	3.1e-07	30.0	0.0	1.4	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|479325439|ref|YP_007865494.1|	-	2.5e-07	30.3	1.0	3.4e-07	29.8	0.7	1.4	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|479325439|ref|YP_007865494.1|	-	1.8e-06	27.2	1.2	3e-06	26.5	0.8	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|479325439|ref|YP_007865494.1|	-	2.5e-06	27.0	0.6	3.8e-06	26.4	0.4	1.2	1	0	0	1	1	1	1	HTH	domain
MarR_2	PF12802.2	gi|479325439|ref|YP_007865494.1|	-	2.1e-05	24.0	0.0	2.6e-05	23.7	0.0	1.2	1	0	0	1	1	1	1	MarR	family
HTH_20	PF12840.2	gi|479325439|ref|YP_007865494.1|	-	2.7e-05	23.8	0.0	3.9e-05	23.3	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|479325439|ref|YP_007865494.1|	-	3e-05	24.0	0.3	5e-05	23.3	0.2	1.4	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_27	PF13463.1	gi|479325439|ref|YP_007865494.1|	-	3.7e-05	23.9	0.1	4.9e-05	23.5	0.1	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_5	PF01022.15	gi|479325439|ref|YP_007865494.1|	-	4e-05	23.1	0.2	6.2e-05	22.5	0.2	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HxlR	PF01638.12	gi|479325439|ref|YP_007865494.1|	-	5e-05	22.8	0.5	6.4e-05	22.5	0.3	1.1	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_28	PF13518.1	gi|479325439|ref|YP_007865494.1|	-	0.0013	18.6	0.2	0.0019	18.1	0.1	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_36	PF13730.1	gi|479325439|ref|YP_007865494.1|	-	0.0027	17.8	0.2	0.0042	17.1	0.2	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_CodY	PF08222.6	gi|479325439|ref|YP_007865494.1|	-	0.0028	16.9	0.1	0.0051	16.1	0.0	1.4	1	1	0	1	1	1	1	CodY	helix-turn-helix	domain
HTH_45	PF14947.1	gi|479325439|ref|YP_007865494.1|	-	0.0048	16.6	2.0	0.0067	16.2	1.3	1.3	1	1	0	1	1	1	1	Winged	helix-turn-helix
Fe_dep_repress	PF01325.14	gi|479325439|ref|YP_007865494.1|	-	0.018	14.9	0.6	0.046	13.6	0.2	1.8	2	0	0	2	2	2	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_12	PF08461.5	gi|479325439|ref|YP_007865494.1|	-	0.022	14.4	0.8	0.039	13.6	0.6	1.5	1	1	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
FeoC	PF09012.5	gi|479325439|ref|YP_007865494.1|	-	0.037	13.7	0.0	0.063	12.9	0.0	1.3	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
GntR	PF00392.16	gi|479325439|ref|YP_007865494.1|	-	0.041	13.3	0.1	0.065	12.6	0.1	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
B-block_TFIIIC	PF04182.7	gi|479325439|ref|YP_007865494.1|	-	0.05	13.4	0.0	0.078	12.8	0.0	1.3	1	1	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
HTH_23	PF13384.1	gi|479325439|ref|YP_007865494.1|	-	0.054	13.1	0.1	0.077	12.6	0.1	1.2	1	0	0	1	1	1	0	Homeodomain-like	domain
Sigma70_r4_2	PF08281.7	gi|479325439|ref|YP_007865494.1|	-	0.055	12.9	0.2	0.095	12.1	0.1	1.5	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_Mga	PF08280.6	gi|479325439|ref|YP_007865494.1|	-	0.063	13.0	0.3	0.14	11.9	0.2	1.9	2	1	0	2	2	1	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
Sulfolobus_pRN	PF05584.6	gi|479325439|ref|YP_007865494.1|	-	0.077	12.9	0.3	0.14	12.1	0.2	1.4	1	0	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
YjcQ	PF09639.5	gi|479325439|ref|YP_007865494.1|	-	0.081	13.0	0.1	0.11	12.5	0.1	1.3	1	0	0	1	1	1	0	YjcQ	protein
HTH_17	PF12728.2	gi|479325439|ref|YP_007865494.1|	-	0.089	13.0	0.9	0.27	11.4	0.1	2.1	2	1	0	2	2	2	0	Helix-turn-helix	domain
HTH_9	PF08221.6	gi|479325439|ref|YP_007865494.1|	-	0.091	12.6	0.2	0.16	11.8	0.1	1.4	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
SgrR_N	PF12793.2	gi|479325439|ref|YP_007865494.1|	-	0.12	12.4	0.0	0.18	11.8	0.0	1.3	1	0	0	1	1	1	0	Sugar	transport-related	sRNA	regulator	N-term
HARE-HTH	PF05066.8	gi|479325439|ref|YP_007865494.1|	-	0.15	12.4	0.3	1.3	9.3	0.1	2.2	2	1	0	2	2	2	0	HB1,	ASXL,	restriction	endonuclease	HTH	domain
MFS_1	PF07690.11	gi|479325440|ref|YP_007865495.1|	-	4e-07	29.0	57.2	0.00023	19.9	8.0	3.8	1	1	2	3	3	3	2	Major	Facilitator	Superfamily
GCV_H	PF01597.14	gi|479325441|ref|YP_007865496.1|	-	1.9e-42	143.7	1.3	2.3e-42	143.4	0.9	1.1	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
Biotin_lipoyl	PF00364.17	gi|479325441|ref|YP_007865496.1|	-	2.8e-06	26.8	3.1	2.8e-06	26.8	2.2	1.6	2	0	0	2	2	2	1	Biotin-requiring	enzyme
RnfC_N	PF13375.1	gi|479325441|ref|YP_007865496.1|	-	0.00027	20.6	0.4	0.0005	19.7	0.3	1.5	1	0	0	1	1	1	1	RnfC	Barrel	sandwich	hybrid	domain
DUF2118	PF09891.4	gi|479325441|ref|YP_007865496.1|	-	0.014	15.1	0.3	0.022	14.4	0.2	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2118)
Peptidase_M23	PF01551.17	gi|479325441|ref|YP_007865496.1|	-	0.021	14.8	0.5	2.1	8.4	0.1	2.2	1	1	1	2	2	2	0	Peptidase	family	M23
BPL_LplA_LipB	PF03099.14	gi|479325442|ref|YP_007865497.1|	-	2.7e-10	40.3	0.0	5e-10	39.4	0.0	1.4	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
Lip_prot_lig_C	PF10437.4	gi|479325442|ref|YP_007865497.1|	-	1.1e-05	25.0	0.4	2.7e-05	23.7	0.3	1.7	1	0	0	1	1	1	1	Bacterial	lipoate	protein	ligase	C-terminus
KMP11	PF03037.11	gi|479325442|ref|YP_007865497.1|	-	0.075	13.6	5.0	0.22	12.1	0.3	3.0	4	0	0	4	4	4	0	Kinetoplastid	membrane	protein	11
DUF3110	PF11360.3	gi|479325443|ref|YP_007865498.1|	-	0.036	13.8	2.0	7.9	6.3	0.8	3.0	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3110)
V-SNARE	PF05008.10	gi|479325444|ref|YP_007865499.1|	-	0.024	14.7	2.2	0.2	11.8	0.0	2.1	2	0	0	2	2	2	0	Vesicle	transport	v-SNARE	protein	N-terminus
Cytochrom_B562	PF07361.6	gi|479325444|ref|YP_007865499.1|	-	0.062	13.7	0.2	0.099	13.0	0.1	1.4	1	1	0	1	1	1	0	Cytochrome	b562
OsmC	PF02566.14	gi|479325445|ref|YP_007865500.1|	-	1.8e-18	66.5	0.0	2.9e-18	65.9	0.0	1.3	1	0	0	1	1	1	1	OsmC-like	protein
DUF3490	PF11995.3	gi|479325446|ref|YP_007865501.1|	-	0.011	15.2	0.0	0.016	14.7	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3490)
Ammonium_transp	PF00909.16	gi|479325447|ref|YP_007865502.1|	-	2e-90	303.1	31.3	2.6e-90	302.7	21.7	1.1	1	0	0	1	1	1	1	Ammonium	Transporter	Family
STT3	PF02516.9	gi|479325450|ref|YP_007865505.1|	-	1.2e-16	60.7	37.0	1.2e-16	60.7	25.6	1.7	2	0	0	2	2	2	1	Oligosaccharyl	transferase	STT3	subunit
DUF3522	PF12036.3	gi|479325450|ref|YP_007865505.1|	-	0.027	14.2	4.7	0.03	14.1	1.4	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3522)
UPF0233	PF06781.7	gi|479325450|ref|YP_007865505.1|	-	1.2	8.8	6.9	0.19	11.3	0.3	3.0	3	0	0	3	3	3	0	Uncharacterised	protein	family	(UPF0233)
Nop10p	PF04135.7	gi|479325451|ref|YP_007865506.1|	-	4.7e-27	93.4	2.1	5.1e-27	93.3	1.5	1.0	1	0	0	1	1	1	1	Nucleolar	RNA-binding	protein,	Nop10p	family
zf-ISL3	PF14690.1	gi|479325451|ref|YP_007865506.1|	-	0.043	13.8	1.1	0.15	12.0	0.2	2.1	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Lar_restr_allev	PF14354.1	gi|479325451|ref|YP_007865506.1|	-	0.049	13.9	0.1	0.049	13.9	0.1	1.4	2	0	0	2	2	2	0	Restriction	alleviation	protein	Lar
NOB1_Zn_bind	PF08772.6	gi|479325451|ref|YP_007865506.1|	-	0.059	13.1	0.1	0.071	12.9	0.1	1.2	1	0	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
zf-NADH-PPase	PF09297.6	gi|479325451|ref|YP_007865506.1|	-	0.069	12.6	0.2	0.41	10.2	0.1	2.1	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
DNA_ligase_ZBD	PF03119.11	gi|479325451|ref|YP_007865506.1|	-	0.069	12.8	0.6	0.069	12.8	0.4	1.7	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
PolC_DP2	PF03833.8	gi|479325451|ref|YP_007865506.1|	-	0.082	10.5	0.1	0.068	10.8	0.1	1.0	1	0	0	1	1	1	0	DNA	polymerase	II	large	subunit	DP2
TF_Zn_Ribbon	PF08271.7	gi|479325451|ref|YP_007865506.1|	-	0.53	9.6	2.7	0.33	10.3	0.3	1.8	1	1	1	2	2	2	0	TFIIB	zinc-binding
EIF_2_alpha	PF07541.7	gi|479325452|ref|YP_007865507.1|	-	4.9e-27	93.9	1.2	1.3e-26	92.4	0.3	2.0	2	0	0	2	2	2	1	Eukaryotic	translation	initiation	factor	2	alpha	subunit
S1	PF00575.18	gi|479325452|ref|YP_007865507.1|	-	5.6e-13	48.7	3.4	2.3e-12	46.8	0.1	2.9	3	0	0	3	3	3	1	S1	RNA	binding	domain
SEO_C	PF14577.1	gi|479325452|ref|YP_007865507.1|	-	0.011	15.1	0.5	0.011	15.1	0.3	1.7	2	0	0	2	2	2	0	Sieve	element	occlusion	C-terminus
B5	PF03484.10	gi|479325452|ref|YP_007865507.1|	-	0.066	13.0	0.0	0.18	11.6	0.0	1.7	1	0	0	1	1	1	0	tRNA	synthetase	B5	domain
RNA_pol_L_2	PF13656.1	gi|479325452|ref|YP_007865507.1|	-	0.076	12.4	3.1	1.5	8.3	0.1	3.4	4	0	0	4	4	4	0	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
Ribosomal_S27e	PF01667.12	gi|479325453|ref|YP_007865508.1|	-	2e-19	68.8	1.0	2.2e-19	68.7	0.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S27
zf-ribbon_3	PF13248.1	gi|479325453|ref|YP_007865508.1|	-	3.2e-05	22.9	1.3	0.045	12.9	0.1	2.2	2	0	0	2	2	2	2	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|479325453|ref|YP_007865508.1|	-	0.0001	21.6	2.2	0.043	13.3	0.2	2.2	2	0	0	2	2	2	2	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|479325453|ref|YP_007865508.1|	-	0.00018	20.7	1.5	0.00027	20.1	1.1	1.3	1	0	0	1	1	1	1	TFIIB	zinc-binding
Lar_restr_allev	PF14354.1	gi|479325453|ref|YP_007865508.1|	-	0.0021	18.3	0.2	0.0027	17.9	0.1	1.3	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
HypA	PF01155.14	gi|479325453|ref|YP_007865508.1|	-	0.0055	16.3	0.1	0.0063	16.1	0.0	1.1	1	0	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
Zn_Tnp_IS1595	PF12760.2	gi|479325453|ref|YP_007865508.1|	-	0.0055	16.4	1.4	0.02	14.7	1.2	1.6	1	1	1	2	2	2	1	Transposase	zinc-ribbon	domain
DNA_RNApol_7kD	PF03604.8	gi|479325453|ref|YP_007865508.1|	-	0.0056	16.1	3.0	0.051	13.0	2.0	2.2	1	1	1	2	2	2	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
TFIIS_C	PF01096.13	gi|479325453|ref|YP_007865508.1|	-	0.0086	15.6	2.8	0.12	12.0	0.2	2.3	1	1	1	2	2	2	1	Transcription	factor	S-II	(TFIIS)
Zn-ribbon_8	PF09723.5	gi|479325453|ref|YP_007865508.1|	-	0.016	15.1	1.5	0.03	14.2	1.0	1.5	1	1	0	1	1	1	0	Zinc	ribbon	domain
CpXC	PF14353.1	gi|479325453|ref|YP_007865508.1|	-	0.017	15.0	1.3	0.69	9.8	0.1	2.1	1	1	1	2	2	2	0	CpXC	protein
IBR	PF01485.16	gi|479325453|ref|YP_007865508.1|	-	0.019	14.8	0.2	0.022	14.6	0.1	1.1	1	0	0	1	1	1	0	IBR	domain
zf-C4_Topoisom	PF01396.14	gi|479325453|ref|YP_007865508.1|	-	0.02	14.3	0.7	1.2	8.7	0.1	2.2	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
Nudix_N_2	PF14803.1	gi|479325453|ref|YP_007865508.1|	-	0.038	13.6	1.2	2.3	7.9	0.0	2.3	2	0	0	2	2	2	0	Nudix	N-terminal
DZR	PF12773.2	gi|479325453|ref|YP_007865508.1|	-	0.041	13.7	1.4	0.1	12.4	1.0	1.5	1	1	0	1	1	1	0	Double	zinc	ribbon
zinc_ribbon_5	PF13719.1	gi|479325453|ref|YP_007865508.1|	-	0.043	13.3	3.6	0.32	10.6	0.3	2.2	1	1	1	2	2	2	0	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|479325453|ref|YP_007865508.1|	-	0.047	13.3	0.6	0.065	12.9	0.4	1.2	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
zf-trcl	PF13451.1	gi|479325453|ref|YP_007865508.1|	-	0.048	13.2	0.8	5.7	6.6	0.0	2.1	1	1	1	2	2	2	0	Probable	zinc-binding	domain
RNA_pol_N	PF01194.12	gi|479325453|ref|YP_007865508.1|	-	0.06	13.3	1.3	0.13	12.3	0.1	1.9	2	0	0	2	2	2	0	RNA	polymerases	N	/	8	kDa	subunit
zf-ISL3	PF14690.1	gi|479325453|ref|YP_007865508.1|	-	0.068	13.2	1.7	0.33	11.0	1.1	2.0	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
DNA_ligase_ZBD	PF03119.11	gi|479325453|ref|YP_007865508.1|	-	0.082	12.6	5.5	0.39	10.4	0.1	2.4	2	1	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zinc_ribbon_4	PF13717.1	gi|479325453|ref|YP_007865508.1|	-	0.089	12.5	4.1	0.53	10.0	0.4	2.2	1	1	1	2	2	2	0	zinc-ribbon	domain
DUF3797	PF12677.2	gi|479325453|ref|YP_007865508.1|	-	0.1	12.2	5.1	0.4	10.3	1.2	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3797)
zf-FPG_IleRS	PF06827.9	gi|479325453|ref|YP_007865508.1|	-	0.1	12.2	0.7	0.73	9.5	0.0	2.1	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
A2L_zn_ribbon	PF08792.5	gi|479325453|ref|YP_007865508.1|	-	0.13	11.7	2.1	4.2	6.9	0.3	2.2	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
zinc_ribbon_6	PF14599.1	gi|479325453|ref|YP_007865508.1|	-	0.13	12.0	0.0	0.18	11.6	0.0	1.2	1	0	0	1	1	1	0	Zinc-ribbon
zf-NADH-PPase	PF09297.6	gi|479325453|ref|YP_007865508.1|	-	0.13	11.7	3.2	3.1	7.4	0.5	2.1	1	1	1	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
Elf1	PF05129.8	gi|479325453|ref|YP_007865508.1|	-	0.2	11.3	0.8	0.47	10.1	0.6	1.7	1	1	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
PADR1	PF08063.7	gi|479325453|ref|YP_007865508.1|	-	0.23	10.8	2.0	0.32	10.4	0.5	1.7	1	1	1	2	2	2	0	PADR1	(NUC008)	domain
PhnA_Zn_Ribbon	PF08274.7	gi|479325453|ref|YP_007865508.1|	-	0.26	11.1	2.4	1.9	8.3	0.3	2.1	1	1	1	2	2	2	0	PhnA	Zinc-Ribbon
Cys_rich_KTR	PF14205.1	gi|479325453|ref|YP_007865508.1|	-	0.3	10.5	1.6	1.1	8.7	1.1	1.9	1	1	0	1	1	1	0	Cysteine-rich	KTR
Mu-like_Com	PF10122.4	gi|479325453|ref|YP_007865508.1|	-	0.31	10.1	4.2	0.24	10.5	0.2	2.0	1	1	1	2	2	2	0	Mu-like	prophage	protein	Com
zf-TFIIB	PF13453.1	gi|479325453|ref|YP_007865508.1|	-	0.32	10.2	1.8	0.6	9.3	1.3	1.4	1	1	0	1	1	1	0	Transcription	factor	zinc-finger
Zn_Tnp_IS1	PF03811.8	gi|479325453|ref|YP_007865508.1|	-	0.44	10.0	3.0	4.1	6.9	2.2	2.1	1	1	1	2	2	2	0	InsA	N-terminal	domain
UPF0547	PF10571.4	gi|479325453|ref|YP_007865508.1|	-	1.2	8.8	5.3	10	5.9	3.7	2.1	1	1	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
Desulfoferrod_N	PF06397.7	gi|479325453|ref|YP_007865508.1|	-	6.9	6.1	6.1	7.1	6.1	0.1	2.6	2	1	1	3	3	3	0	Desulfoferrodoxin,	N-terminal	domain
Ribosomal_L44	PF00935.14	gi|479325454|ref|YP_007865509.1|	-	1.2e-29	102.0	7.3	1.2e-29	102.0	5.1	1.4	2	0	0	2	2	2	1	Ribosomal	protein	L44
zf-ribbon_3	PF13248.1	gi|479325454|ref|YP_007865509.1|	-	0.004	16.3	0.5	1.6	8.0	0.0	2.2	2	0	0	2	2	2	2	zinc-ribbon	domain
zf-ISL3	PF14690.1	gi|479325454|ref|YP_007865509.1|	-	0.0049	16.8	0.9	2.2	8.3	0.2	2.4	2	0	0	2	2	2	2	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zinc_ribbon_2	PF13240.1	gi|479325454|ref|YP_007865509.1|	-	0.0067	15.8	4.4	0.84	9.2	0.1	2.3	2	0	0	2	2	2	2	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|479325454|ref|YP_007865509.1|	-	0.031	13.9	4.4	0.3	10.8	0.2	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|479325454|ref|YP_007865509.1|	-	0.037	13.6	4.4	0.37	10.4	0.2	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF2082	PF09855.4	gi|479325454|ref|YP_007865509.1|	-	0.038	13.8	1.6	0.95	9.3	0.1	2.3	2	0	0	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
Mu-like_Com	PF10122.4	gi|479325454|ref|YP_007865509.1|	-	0.04	12.9	2.0	1.2	8.1	0.2	2.2	2	0	0	2	2	2	0	Mu-like	prophage	protein	Com
DZR	PF12773.2	gi|479325454|ref|YP_007865509.1|	-	0.045	13.5	3.0	0.14	11.9	2.0	1.8	1	1	0	1	1	1	0	Double	zinc	ribbon
PyrI_C	PF02748.10	gi|479325454|ref|YP_007865509.1|	-	0.057	12.8	0.7	0.17	11.3	0.1	1.9	2	0	0	2	2	2	0	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
zf-UBR	PF02207.15	gi|479325454|ref|YP_007865509.1|	-	0.06	13.0	0.9	1.7	8.3	0.1	2.1	2	0	0	2	2	2	0	Putative	zinc	finger	in	N-recognin	(UBR	box)
DUF2387	PF09526.5	gi|479325454|ref|YP_007865509.1|	-	0.085	12.7	0.1	11	6.0	0.0	2.3	2	0	0	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
Baculo_ME53	PF06061.6	gi|479325454|ref|YP_007865509.1|	-	0.096	11.6	1.7	0.096	11.6	0.1	1.7	2	0	0	2	2	2	0	Baculoviridae	ME53
HECT_2	PF09814.4	gi|479325454|ref|YP_007865509.1|	-	0.098	11.3	0.6	0.12	11.0	0.4	1.2	1	1	0	1	1	1	0	HECT-like	Ubiquitin-conjugating	enzyme	(E2)-binding
RNA_POL_M_15KD	PF02150.11	gi|479325454|ref|YP_007865509.1|	-	0.13	12.0	1.0	3.3	7.4	0.0	2.3	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
Cys_rich_KTR	PF14205.1	gi|479325454|ref|YP_007865509.1|	-	0.13	11.6	2.6	1	8.8	0.1	2.2	2	0	0	2	2	2	0	Cysteine-rich	KTR
DNA_RNApol_7kD	PF03604.8	gi|479325454|ref|YP_007865509.1|	-	0.22	10.9	2.4	0.32	10.5	0.1	2.2	2	1	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
TFIIS_C	PF01096.13	gi|479325454|ref|YP_007865509.1|	-	0.27	10.9	3.8	2.7	7.7	0.2	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
Ribosomal_L34e	PF01199.13	gi|479325454|ref|YP_007865509.1|	-	1.7	8.9	7.7	3.1	8.0	1.3	2.0	1	1	1	2	2	2	0	Ribosomal	protein	L34e
DNA_primase_S	PF01896.14	gi|479325456|ref|YP_007865511.1|	-	1.2e-18	67.3	0.1	7.2e-18	64.7	0.0	2.2	1	1	0	1	1	1	1	Eukaryotic	and	archaeal	DNA	primase	small	subunit
RecR	PF02132.10	gi|479325456|ref|YP_007865511.1|	-	0.092	12.1	1.6	0.18	11.2	1.1	1.5	1	0	0	1	1	1	0	RecR	protein
zf-NADH-PPase	PF09297.6	gi|479325456|ref|YP_007865511.1|	-	0.093	12.2	0.2	0.15	11.5	0.2	1.3	1	0	0	1	1	1	0	NADH	pyrophosphatase	zinc	ribbon	domain
NOB1_Zn_bind	PF08772.6	gi|479325456|ref|YP_007865511.1|	-	0.14	11.9	0.6	0.3	10.9	0.4	1.5	1	0	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
PCNA_N	PF00705.13	gi|479325457|ref|YP_007865512.1|	-	1.7e-09	37.2	0.0	2.9e-09	36.5	0.0	1.3	1	0	0	1	1	1	1	Proliferating	cell	nuclear	antigen,	N-terminal	domain
PCNA_C	PF02747.10	gi|479325457|ref|YP_007865512.1|	-	2.8e-09	36.9	0.2	8.3e-08	32.2	0.0	2.7	3	1	0	3	3	3	1	Proliferating	cell	nuclear	antigen,	C-terminal	domain
Rad1	PF02144.11	gi|479325457|ref|YP_007865512.1|	-	9.3e-06	24.6	0.1	0.0082	14.9	0.0	2.1	1	1	1	2	2	2	2	Repair	protein	Rad1/Rec1/Rad17
ATP_bind_1	PF03029.12	gi|479325458|ref|YP_007865513.1|	-	1.1e-56	192.0	0.0	1.3e-56	191.8	0.0	1.0	1	0	0	1	1	1	1	Conserved	hypothetical	ATP	binding	protein
GTP_EFTU	PF00009.22	gi|479325458|ref|YP_007865513.1|	-	2e-06	27.3	0.4	0.043	13.2	0.0	2.9	2	1	0	2	2	2	2	Elongation	factor	Tu	GTP	binding	domain
AAA_17	PF13207.1	gi|479325458|ref|YP_007865513.1|	-	4e-06	27.6	0.1	7.8e-06	26.7	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
PduV-EutP	PF10662.4	gi|479325458|ref|YP_007865513.1|	-	8.9e-06	25.2	0.0	0.0057	16.1	0.0	2.9	2	1	1	3	3	3	1	Ethanolamine	utilisation	-	propanediol	utilisation
CbiA	PF01656.18	gi|479325458|ref|YP_007865513.1|	-	9.7e-06	25.1	0.2	1.3e-05	24.7	0.1	1.4	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_18	PF13238.1	gi|479325458|ref|YP_007865513.1|	-	0.0001	22.6	0.1	0.00024	21.4	0.0	1.8	2	1	0	2	2	1	1	AAA	domain
AAA_10	PF12846.2	gi|479325458|ref|YP_007865513.1|	-	0.00011	21.7	0.0	0.00017	21.1	0.0	1.4	1	0	0	1	1	1	1	AAA-like	domain
SRP54	PF00448.17	gi|479325458|ref|YP_007865513.1|	-	0.00013	21.4	0.1	0.0014	18.1	0.0	2.3	1	1	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
G-alpha	PF00503.15	gi|479325458|ref|YP_007865513.1|	-	0.00015	20.5	0.5	0.019	13.7	0.0	2.2	2	0	0	2	2	2	1	G-protein	alpha	subunit
AAA_16	PF13191.1	gi|479325458|ref|YP_007865513.1|	-	0.00018	21.5	0.0	0.00089	19.2	0.0	2.0	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_24	PF13479.1	gi|479325458|ref|YP_007865513.1|	-	0.00084	18.9	0.0	0.0017	17.9	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
MMR_HSR1	PF01926.18	gi|479325458|ref|YP_007865513.1|	-	0.0015	18.4	0.1	0.0047	16.8	0.1	1.9	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
AAA_14	PF13173.1	gi|479325458|ref|YP_007865513.1|	-	0.0031	17.3	0.3	0.037	13.9	0.0	2.3	2	1	0	2	2	2	1	AAA	domain
NACHT	PF05729.7	gi|479325458|ref|YP_007865513.1|	-	0.004	16.8	0.0	0.011	15.3	0.0	1.8	2	0	0	2	2	2	1	NACHT	domain
ArgK	PF03308.11	gi|479325458|ref|YP_007865513.1|	-	0.0041	15.9	0.0	0.097	11.4	0.0	2.1	2	0	0	2	2	2	1	ArgK	protein
cobW	PF02492.14	gi|479325458|ref|YP_007865513.1|	-	0.0047	16.3	0.1	0.14	11.6	0.0	2.3	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
DUF87	PF01935.12	gi|479325458|ref|YP_007865513.1|	-	0.006	16.4	0.2	0.011	15.5	0.1	1.7	1	1	0	1	1	1	1	Domain	of	unknown	function	DUF87
MobB	PF03205.9	gi|479325458|ref|YP_007865513.1|	-	0.0081	15.8	0.0	0.016	14.9	0.0	1.4	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_28	PF13521.1	gi|479325458|ref|YP_007865513.1|	-	0.01	15.7	0.0	0.018	14.9	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
SRPRB	PF09439.5	gi|479325458|ref|YP_007865513.1|	-	0.011	14.9	0.2	2.1	7.5	0.0	2.2	2	0	0	2	2	2	0	Signal	recognition	particle	receptor	beta	subunit
KTI12	PF08433.5	gi|479325458|ref|YP_007865513.1|	-	0.014	14.6	0.0	0.025	13.8	0.0	1.4	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
RNA_helicase	PF00910.17	gi|479325458|ref|YP_007865513.1|	-	0.017	15.2	0.0	0.1	12.8	0.0	2.1	2	0	0	2	2	2	0	RNA	helicase
NTPase_1	PF03266.10	gi|479325458|ref|YP_007865513.1|	-	0.023	14.4	0.4	0.37	10.4	0.0	2.5	3	0	0	3	3	3	0	NTPase
APS_kinase	PF01583.15	gi|479325458|ref|YP_007865513.1|	-	0.024	14.3	0.0	0.036	13.7	0.0	1.3	1	0	0	1	1	1	0	Adenylylsulphate	kinase
PhoH	PF02562.11	gi|479325458|ref|YP_007865513.1|	-	0.027	13.7	0.0	0.044	12.9	0.0	1.3	1	0	0	1	1	1	0	PhoH-like	protein
AAA_22	PF13401.1	gi|479325458|ref|YP_007865513.1|	-	0.029	14.5	0.2	0.17	11.9	0.0	2.0	2	1	0	2	2	2	0	AAA	domain
ABC_tran	PF00005.22	gi|479325458|ref|YP_007865513.1|	-	0.036	14.3	0.1	0.054	13.7	0.0	1.5	1	1	0	1	1	1	0	ABC	transporter
KAP_NTPase	PF07693.9	gi|479325458|ref|YP_007865513.1|	-	0.06	12.3	0.0	0.089	11.7	0.0	1.4	1	0	0	1	1	1	0	KAP	family	P-loop	domain
DUF258	PF03193.11	gi|479325458|ref|YP_007865513.1|	-	0.063	12.4	0.1	1.1	8.4	0.0	2.6	2	1	0	2	2	2	0	Protein	of	unknown	function,	DUF258
AAA_30	PF13604.1	gi|479325458|ref|YP_007865513.1|	-	0.074	12.6	0.0	0.29	10.6	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
Dynamin_N	PF00350.18	gi|479325458|ref|YP_007865513.1|	-	0.081	12.7	0.1	0.51	10.1	0.1	2.1	1	1	0	1	1	1	0	Dynamin	family
NB-ARC	PF00931.17	gi|479325458|ref|YP_007865513.1|	-	0.083	11.7	0.0	0.14	11.0	0.0	1.3	1	0	0	1	1	1	0	NB-ARC	domain
TrwB_AAD_bind	PF10412.4	gi|479325458|ref|YP_007865513.1|	-	0.094	11.3	0.0	0.15	10.6	0.0	1.3	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
Viral_helicase1	PF01443.13	gi|479325458|ref|YP_007865513.1|	-	0.1	12.0	0.0	0.19	11.2	0.0	1.4	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
ArsA_ATPase	PF02374.10	gi|479325458|ref|YP_007865513.1|	-	0.1	11.5	0.0	0.25	10.3	0.0	1.6	1	0	0	1	1	1	0	Anion-transporting	ATPase
Zeta_toxin	PF06414.7	gi|479325458|ref|YP_007865513.1|	-	0.11	11.6	0.0	0.17	10.9	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
AAA_5	PF07728.9	gi|479325458|ref|YP_007865513.1|	-	0.11	12.2	0.0	0.19	11.4	0.0	1.6	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
Miro	PF08477.8	gi|479325458|ref|YP_007865513.1|	-	0.11	12.9	0.0	2.4	8.6	0.0	2.4	2	0	0	2	2	2	0	Miro-like	protein
Septin	PF00735.13	gi|479325458|ref|YP_007865513.1|	-	0.16	10.9	0.4	9.5	5.1	0.1	2.4	2	1	0	2	2	2	0	Septin
Pribosyltran_N	PF13793.1	gi|479325459|ref|YP_007865514.1|	-	1.4e-30	105.3	0.0	1.3e-26	92.6	0.0	2.2	2	0	0	2	2	2	2	N-terminal	domain	of	ribose	phosphate	pyrophosphokinase
Pribosyltran	PF00156.22	gi|479325459|ref|YP_007865514.1|	-	3.8e-15	55.7	0.2	3.8e-15	55.7	0.1	2.1	4	0	0	4	4	4	1	Phosphoribosyl	transferase	domain
Pribosyl_synth	PF14572.1	gi|479325459|ref|YP_007865514.1|	-	4.3e-09	36.3	1.4	8.4e-09	35.4	0.4	1.9	2	0	0	2	2	2	1	Phosphoribosyl	synthetase-associated	domain
UPRTase	PF14681.1	gi|479325459|ref|YP_007865514.1|	-	0.0018	17.4	0.1	0.0095	15.1	0.0	1.9	2	0	0	2	2	2	1	Uracil	phosphoribosyltransferase
PRTase_2	PF15609.1	gi|479325459|ref|YP_007865514.1|	-	0.004	16.4	0.1	0.0057	15.9	0.0	1.3	1	0	0	1	1	1	1	Phosphoribosyl	transferase
UPF0020	PF01170.13	gi|479325460|ref|YP_007865515.1|	-	4.9e-28	97.9	0.0	9.5e-28	96.9	0.0	1.5	2	0	0	2	2	2	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_26	PF13659.1	gi|479325460|ref|YP_007865515.1|	-	3.6e-11	43.1	0.0	6.1e-11	42.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
N6_N4_Mtase	PF01555.13	gi|479325460|ref|YP_007865515.1|	-	2.4e-10	40.3	0.0	3.8e-07	29.8	0.0	2.5	2	1	0	2	2	2	2	DNA	methylase
MTS	PF05175.9	gi|479325460|ref|YP_007865515.1|	-	4.9e-05	22.7	0.0	9.6e-05	21.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.1	gi|479325460|ref|YP_007865515.1|	-	0.00047	19.7	0.0	0.0074	15.8	0.0	2.3	2	0	0	2	2	2	1	Methyltransferase	domain
MethyltransfD12	PF02086.10	gi|479325460|ref|YP_007865515.1|	-	0.0005	19.6	0.3	0.0037	16.7	0.2	2.3	1	1	0	1	1	1	1	D12	class	N6	adenine-specific	DNA	methyltransferase
Cons_hypoth95	PF03602.10	gi|479325460|ref|YP_007865515.1|	-	0.0024	17.2	0.0	0.0058	16.0	0.0	1.6	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltransf_23	PF13489.1	gi|479325460|ref|YP_007865515.1|	-	0.017	14.8	0.0	0.098	12.3	0.0	2.1	1	1	0	1	1	1	0	Methyltransferase	domain
Eco57I	PF07669.6	gi|479325460|ref|YP_007865515.1|	-	0.017	15.4	0.0	0.77	10.1	0.0	2.4	2	0	0	2	2	2	0	Eco57I	restriction-modification	methylase
S_100	PF01023.14	gi|479325460|ref|YP_007865515.1|	-	0.031	13.6	0.0	0.081	12.2	0.0	1.7	1	0	0	1	1	1	0	S-100/ICaBP	type	calcium	binding	domain
N6_Mtase	PF02384.11	gi|479325460|ref|YP_007865515.1|	-	0.077	12.0	0.1	0.19	10.7	0.0	1.7	2	1	0	2	2	2	0	N-6	DNA	Methylase
Methyltransf_25	PF13649.1	gi|479325460|ref|YP_007865515.1|	-	0.16	12.3	0.0	0.29	11.5	0.0	1.6	1	0	0	1	1	1	0	Methyltransferase	domain
Lactamase_B_2	PF12706.2	gi|479325461|ref|YP_007865516.1|	-	9.4e-21	74.2	0.0	1.5e-20	73.5	0.0	1.3	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|479325461|ref|YP_007865516.1|	-	5.2e-07	29.5	0.1	9.8e-06	25.3	0.1	2.1	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
RNA_binding	PF01877.12	gi|479325462|ref|YP_007865517.1|	-	4.6e-28	97.6	0.6	5.3e-28	97.4	0.4	1.0	1	0	0	1	1	1	1	RNA	binding
AAA_18	PF13238.1	gi|479325463|ref|YP_007865518.1|	-	1.5e-15	57.6	0.6	2.7e-15	56.7	0.1	1.6	1	1	1	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|479325463|ref|YP_007865518.1|	-	4.9e-14	53.1	0.7	1.2e-13	51.9	0.5	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|479325463|ref|YP_007865518.1|	-	2.5e-09	37.1	0.0	3.4e-09	36.7	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
ADK	PF00406.17	gi|479325463|ref|YP_007865518.1|	-	5e-06	26.4	0.0	5.9e-06	26.2	0.0	1.2	1	0	0	1	1	1	1	Adenylate	kinase
Zeta_toxin	PF06414.7	gi|479325463|ref|YP_007865518.1|	-	1.3e-05	24.4	0.2	4.8e-05	22.5	0.1	1.8	1	1	0	1	1	1	1	Zeta	toxin
AAA_22	PF13401.1	gi|479325463|ref|YP_007865518.1|	-	2.3e-05	24.5	0.0	3.8e-05	23.8	0.0	1.3	1	1	0	1	1	1	1	AAA	domain
CoaE	PF01121.15	gi|479325463|ref|YP_007865518.1|	-	0.00019	20.8	0.1	0.26	10.6	0.0	2.1	1	1	1	2	2	2	2	Dephospho-CoA	kinase
KTI12	PF08433.5	gi|479325463|ref|YP_007865518.1|	-	0.00084	18.6	0.4	0.002	17.4	0.0	1.7	2	0	0	2	2	2	1	Chromatin	associated	protein	KTI12
AAA_28	PF13521.1	gi|479325463|ref|YP_007865518.1|	-	0.003	17.5	0.0	0.0033	17.4	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
Hpr_kinase_C	PF07475.7	gi|479325463|ref|YP_007865518.1|	-	0.0034	16.7	0.1	0.0063	15.8	0.1	1.4	1	0	0	1	1	1	1	HPr	Serine	kinase	C-terminal	domain
NTPase_1	PF03266.10	gi|479325463|ref|YP_007865518.1|	-	0.0043	16.7	0.2	0.31	10.7	0.0	2.2	2	0	0	2	2	2	1	NTPase
AAA_14	PF13173.1	gi|479325463|ref|YP_007865518.1|	-	0.011	15.6	0.0	0.02	14.7	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
cobW	PF02492.14	gi|479325463|ref|YP_007865518.1|	-	0.012	15.0	0.1	2.7	7.4	0.1	2.1	1	1	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
Sigma54_activ_2	PF14532.1	gi|479325463|ref|YP_007865518.1|	-	0.013	15.5	0.0	0.04	13.9	0.0	1.8	2	0	0	2	2	2	0	Sigma-54	interaction	domain
APS_kinase	PF01583.15	gi|479325463|ref|YP_007865518.1|	-	0.027	14.1	0.1	0.33	10.5	0.0	2.1	1	1	1	2	2	2	0	Adenylylsulphate	kinase
CPT	PF07931.7	gi|479325463|ref|YP_007865518.1|	-	0.029	14.0	0.2	0.23	11.0	0.1	2.0	1	1	0	1	1	1	0	Chloramphenicol	phosphotransferase-like	protein
CbiA	PF01656.18	gi|479325463|ref|YP_007865518.1|	-	0.031	13.6	0.1	0.068	12.5	0.1	1.7	1	1	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_5	PF07728.9	gi|479325463|ref|YP_007865518.1|	-	0.048	13.3	0.1	0.53	9.9	0.0	2.2	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
Cytidylate_kin2	PF13189.1	gi|479325463|ref|YP_007865518.1|	-	0.053	13.4	0.7	3.8	7.3	0.0	2.4	2	1	0	2	2	2	0	Cytidylate	kinase-like	family
ArgK	PF03308.11	gi|479325463|ref|YP_007865518.1|	-	0.053	12.2	0.2	0.11	11.3	0.1	1.4	1	0	0	1	1	1	0	ArgK	protein
THOC7	PF05615.8	gi|479325463|ref|YP_007865518.1|	-	0.088	13.0	0.0	0.12	12.5	0.0	1.3	1	0	0	1	1	1	0	Tho	complex	subunit	7
AAA_25	PF13481.1	gi|479325463|ref|YP_007865518.1|	-	0.15	11.4	0.2	3.7	6.8	0.1	2.3	2	0	0	2	2	2	0	AAA	domain
AAA_19	PF13245.1	gi|479325463|ref|YP_007865518.1|	-	0.16	11.7	0.1	0.71	9.6	0.0	2.1	3	0	0	3	3	3	0	Part	of	AAA	domain
LigT_PEase	PF02834.11	gi|479325464|ref|YP_007865519.1|	-	1.6e-35	120.9	0.0	2.8e-18	65.6	0.0	2.0	2	0	0	2	2	2	2	LigT	like	Phosphoesterase
2_5_RNA_ligase2	PF13563.1	gi|479325464|ref|YP_007865519.1|	-	3.3e-14	52.8	0.0	4.1e-14	52.5	0.0	1.1	1	0	0	1	1	1	1	2'-5'	RNA	ligase	superfamily
AKAP7_NLS	PF10469.4	gi|479325464|ref|YP_007865519.1|	-	2.2e-11	43.8	0.0	3.6e-11	43.1	0.0	1.3	1	0	0	1	1	1	1	AKAP7	2'5'	RNA	ligase-like	domain
HVSL	PF09749.4	gi|479325464|ref|YP_007865519.1|	-	0.019	14.0	0.0	0.049	12.6	0.0	1.7	1	1	1	2	2	2	0	Uncharacterised	conserved	protein
tRNA_NucTransf2	PF09249.6	gi|479325465|ref|YP_007865520.1|	-	2.5e-46	156.2	0.0	4.2e-46	155.5	0.0	1.4	1	0	0	1	1	1	1	tRNA	nucleotidyltransferase,	second	domain
NTP_transf_2	PF01909.18	gi|479325465|ref|YP_007865520.1|	-	1.6e-12	47.5	0.7	5.9e-12	45.7	0.5	2.0	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
DNA_pol_B_palm	PF14792.1	gi|479325465|ref|YP_007865520.1|	-	0.023	14.7	0.0	0.074	13.1	0.0	1.8	2	0	0	2	2	2	0	DNA	polymerase	beta	palm
UPF0180	PF03698.8	gi|479325465|ref|YP_007865520.1|	-	0.051	13.4	0.1	0.66	9.8	0.0	2.5	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0180)
RIO1	PF01163.17	gi|479325466|ref|YP_007865521.1|	-	0.00081	18.7	0.1	0.0015	17.9	0.0	1.4	1	0	0	1	1	1	1	RIO1	family
APH	PF01636.18	gi|479325466|ref|YP_007865521.1|	-	0.018	14.7	0.0	0.047	13.4	0.0	1.6	2	0	0	2	2	2	0	Phosphotransferase	enzyme	family
Curlin_rpt	PF07012.7	gi|479325468|ref|YP_007865523.1|	-	0.16	11.7	0.9	0.39	10.4	0.6	1.8	1	0	0	1	1	1	0	Curlin	associated	repeat
ABC_tran	PF00005.22	gi|479325469|ref|YP_007865524.1|	-	1.8e-24	86.5	0.0	3e-24	85.8	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|479325469|ref|YP_007865524.1|	-	4.3e-17	62.9	4.4	5.6e-15	56.0	3.0	2.2	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|479325469|ref|YP_007865524.1|	-	1.1e-10	41.0	4.4	8.4e-08	31.7	3.1	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|479325469|ref|YP_007865524.1|	-	6e-06	26.7	7.2	1.1e-05	25.8	5.0	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|479325469|ref|YP_007865524.1|	-	9.3e-06	25.0	0.0	1.6e-05	24.3	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_14	PF13173.1	gi|479325469|ref|YP_007865524.1|	-	1.3e-05	25.0	0.5	0.00085	19.2	0.0	2.2	1	1	1	2	2	2	1	AAA	domain
T2SE	PF00437.15	gi|479325469|ref|YP_007865524.1|	-	0.00015	20.8	0.0	0.00019	20.4	0.0	1.2	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
Arch_ATPase	PF01637.13	gi|479325469|ref|YP_007865524.1|	-	0.0013	18.5	0.2	0.0022	17.7	0.1	1.4	1	0	0	1	1	1	1	Archaeal	ATPase
AAA_19	PF13245.1	gi|479325469|ref|YP_007865524.1|	-	0.0033	17.1	0.0	0.0057	16.3	0.0	1.3	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_17	PF13207.1	gi|479325469|ref|YP_007865524.1|	-	0.0043	17.8	0.0	0.0081	16.9	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
NACHT	PF05729.7	gi|479325469|ref|YP_007865524.1|	-	0.0052	16.4	0.0	0.016	14.8	0.0	1.8	2	0	0	2	2	2	1	NACHT	domain
SbcCD_C	PF13558.1	gi|479325469|ref|YP_007865524.1|	-	0.012	15.4	0.0	0.084	12.7	0.0	2.1	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_18	PF13238.1	gi|479325469|ref|YP_007865524.1|	-	0.015	15.6	2.9	0.29	11.4	2.0	2.3	1	1	0	1	1	1	0	AAA	domain
DEAD	PF00270.24	gi|479325469|ref|YP_007865524.1|	-	0.024	14.1	0.0	0.045	13.2	0.0	1.6	1	1	0	1	1	1	0	DEAD/DEAH	box	helicase
AAA_24	PF13479.1	gi|479325469|ref|YP_007865524.1|	-	0.03	13.9	0.0	0.047	13.2	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
DUF3584	PF12128.3	gi|479325469|ref|YP_007865524.1|	-	0.036	11.4	0.0	0.05	10.9	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
AAA_16	PF13191.1	gi|479325469|ref|YP_007865524.1|	-	0.064	13.2	0.0	0.12	12.3	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_11	PF13086.1	gi|479325469|ref|YP_007865524.1|	-	0.074	12.6	0.0	0.078	12.5	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
AAA_25	PF13481.1	gi|479325469|ref|YP_007865524.1|	-	0.075	12.4	0.0	0.35	10.2	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|479325469|ref|YP_007865524.1|	-	0.078	12.4	0.0	0.13	11.7	0.0	1.3	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
AAA_22	PF13401.1	gi|479325469|ref|YP_007865524.1|	-	0.085	12.9	0.7	1.5	9.0	0.5	2.2	1	1	0	1	1	1	0	AAA	domain
Sigma54_activat	PF00158.21	gi|479325469|ref|YP_007865524.1|	-	0.11	11.9	0.0	0.18	11.2	0.0	1.3	1	0	0	1	1	1	0	Sigma-54	interaction	domain
AAA_10	PF12846.2	gi|479325469|ref|YP_007865524.1|	-	0.11	11.8	0.1	1.4	8.3	0.0	2.1	1	1	0	2	2	2	0	AAA-like	domain
AAA	PF00004.24	gi|479325469|ref|YP_007865524.1|	-	0.12	12.6	0.1	0.23	11.6	0.0	1.7	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_5	PF07728.9	gi|479325469|ref|YP_007865524.1|	-	0.13	11.9	0.1	0.22	11.2	0.0	1.7	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_30	PF13604.1	gi|479325469|ref|YP_007865524.1|	-	0.14	11.7	0.0	0.38	10.3	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
Kelch_6	PF13964.1	gi|479325470|ref|YP_007865525.1|	-	4.1e-20	71.0	39.6	8.7e-06	25.6	1.0	7.6	4	1	3	7	7	7	4	Kelch	motif
fn3	PF00041.16	gi|479325470|ref|YP_007865525.1|	-	5.6e-20	71.2	17.7	4.7e-11	42.6	0.6	3.8	4	2	0	4	4	4	2	Fibronectin	type	III	domain
Kelch_1	PF01344.20	gi|479325470|ref|YP_007865525.1|	-	1.1e-12	47.2	38.0	0.001	18.5	0.8	7.2	6	1	0	6	6	6	5	Kelch	motif
Kelch_4	PF13418.1	gi|479325470|ref|YP_007865525.1|	-	1.7e-12	46.9	17.8	0.0028	17.3	0.0	6.3	5	1	1	6	6	6	4	Galactose	oxidase,	central	domain
Kelch_5	PF13854.1	gi|479325470|ref|YP_007865525.1|	-	2.5e-11	43.2	37.3	0.041	13.8	1.5	7.0	7	0	0	7	7	7	5	Kelch	motif
Kelch_2	PF07646.10	gi|479325470|ref|YP_007865525.1|	-	8e-08	31.7	16.5	0.15	11.8	0.0	6.3	6	0	0	6	6	6	4	Kelch	motif
Interfer-bind	PF09294.5	gi|479325470|ref|YP_007865525.1|	-	0.0064	16.5	0.1	1.3	9.0	0.0	2.5	2	0	0	2	2	2	1	Interferon-alpha/beta	receptor,	fibronectin	type	III
Kelch_3	PF13415.1	gi|479325470|ref|YP_007865525.1|	-	0.038	14.1	22.8	1.7	8.9	0.1	6.8	6	1	0	6	6	6	0	Galactose	oxidase,	central	domain
DUF2369	PF10179.4	gi|479325470|ref|YP_007865525.1|	-	0.053	12.6	0.5	6.9	5.6	0.1	2.3	2	0	0	2	2	2	0	Uncharacterised	conserved	protein	(DUF2369)
Y_Y_Y	PF07495.8	gi|479325470|ref|YP_007865525.1|	-	0.76	9.5	13.1	0.3	10.8	0.2	4.1	4	0	0	4	4	4	0	Y_Y_Y	domain
BPD_transp_1	PF00528.17	gi|479325471|ref|YP_007865526.1|	-	3.8e-17	62.3	15.4	3.8e-17	62.3	10.7	2.0	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
DUF2636	PF11120.3	gi|479325471|ref|YP_007865526.1|	-	0.095	12.2	0.1	0.37	10.3	0.1	2.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2636)
SBP_bac_11	PF13531.1	gi|479325472|ref|YP_007865527.1|	-	6.8e-21	74.9	0.8	9.4e-21	74.4	0.6	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_1	PF01547.20	gi|479325472|ref|YP_007865527.1|	-	2.5e-11	43.9	5.9	3.5e-11	43.4	4.1	1.2	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
DUF1628	PF07790.6	gi|479325472|ref|YP_007865527.1|	-	0.064	14.0	2.7	0.15	12.8	1.8	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1628)
Herpes_US9	PF06072.6	gi|479325472|ref|YP_007865527.1|	-	0.11	12.2	0.9	0.29	11.0	0.7	1.6	1	0	0	1	1	1	0	Alphaherpesvirus	tegument	protein	US9
DUF2371	PF10177.4	gi|479325472|ref|YP_007865527.1|	-	1.6	8.6	6.5	0.48	10.2	0.5	2.5	2	1	1	3	3	3	0	Uncharacterised	conserved	protein	(DUF2371)
DUF2878	PF11086.3	gi|479325472|ref|YP_007865527.1|	-	9	6.2	7.6	9.8	6.1	0.3	3.0	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2878)
adh_short	PF00106.20	gi|479325473|ref|YP_007865528.1|	-	4.9e-23	81.8	0.1	2.2e-22	79.7	0.1	1.9	1	1	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|479325473|ref|YP_007865528.1|	-	5.9e-17	62.2	0.0	8.6e-17	61.6	0.0	1.2	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
Epimerase	PF01370.16	gi|479325473|ref|YP_007865528.1|	-	4.1e-08	32.9	0.1	6.5e-08	32.3	0.0	1.4	2	0	0	2	2	2	1	NAD	dependent	epimerase/dehydratase	family
NAD_binding_10	PF13460.1	gi|479325473|ref|YP_007865528.1|	-	1.2e-06	28.6	0.0	2.7e-06	27.5	0.0	1.6	1	1	0	1	1	1	1	NADH(P)-binding
KR	PF08659.5	gi|479325473|ref|YP_007865528.1|	-	0.00012	21.8	0.0	0.0056	16.3	0.0	2.2	1	1	0	1	1	1	1	KR	domain
THF_DHG_CYH_C	PF02882.14	gi|479325473|ref|YP_007865528.1|	-	0.0011	18.0	0.1	0.0024	16.9	0.1	1.5	1	0	0	1	1	1	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
RmlD_sub_bind	PF04321.12	gi|479325473|ref|YP_007865528.1|	-	0.0014	17.5	0.1	0.0049	15.7	0.0	1.8	2	0	0	2	2	2	1	RmlD	substrate	binding	domain
Molybdopterin	PF00384.17	gi|479325474|ref|YP_007865529.1|	-	1.4e-75	254.7	0.0	1.7e-75	254.4	0.0	1.1	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase
Molydop_binding	PF01568.16	gi|479325474|ref|YP_007865529.1|	-	7.5e-25	86.8	0.0	1.4e-24	86.0	0.0	1.4	1	0	0	1	1	1	1	Molydopterin	dinucleotide	binding	domain
Molybdop_Fe4S4	PF04879.11	gi|479325474|ref|YP_007865529.1|	-	3.6e-17	61.9	0.2	7.7e-17	60.8	0.2	1.6	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase	Fe4S4	domain
TatD_DNase	PF01026.16	gi|479325475|ref|YP_007865530.1|	-	6.1e-37	127.1	0.0	1.2e-36	126.2	0.0	1.4	1	1	0	1	1	1	1	TatD	related	DNase
DUF3938	PF13074.1	gi|479325476|ref|YP_007865531.1|	-	0.15	11.9	0.9	0.27	11.0	0.2	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3938)
Oxidored_q1	PF00361.15	gi|479325479|ref|YP_007865534.1|	-	3.7e-47	160.8	22.7	3.7e-47	160.8	15.8	4.0	2	2	2	4	4	4	2	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
Complex1_49kDa	PF00346.14	gi|479325480|ref|YP_007865535.1|	-	1.2e-11	44.0	0.0	1.8e-10	40.3	0.0	2.1	1	1	1	2	2	2	1	Respiratory-chain	NADH	dehydrogenase,	49	Kd	subunit
NiFeSe_Hases	PF00374.14	gi|479325480|ref|YP_007865535.1|	-	0.00013	20.8	0.0	0.0016	17.2	0.0	2.0	2	0	0	2	2	2	1	Nickel-dependent	hydrogenase
Oxidored_q6	PF01058.17	gi|479325481|ref|YP_007865536.1|	-	3.7e-21	75.0	0.4	1.1e-20	73.5	0.2	1.7	1	1	0	1	1	1	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
Fer4	PF00037.22	gi|479325481|ref|YP_007865536.1|	-	0.035	13.7	12.3	0.12	11.9	0.3	3.6	4	0	0	4	4	4	0	4Fe-4S	binding	domain
CFC	PF09443.5	gi|479325481|ref|YP_007865536.1|	-	0.04	13.5	1.0	0.071	12.7	0.7	1.4	1	0	0	1	1	1	0	Cripto_Frl-1_Cryptic	(CFC)
DUF164	PF02591.10	gi|479325481|ref|YP_007865536.1|	-	0.086	12.6	2.1	0.12	12.2	0.0	2.2	3	0	0	3	3	3	0	Putative	zinc	ribbon	domain
Oxidored_q1	PF00361.15	gi|479325482|ref|YP_007865537.1|	-	3.9e-21	75.5	28.8	3.9e-21	75.5	19.9	4.2	3	1	1	4	4	4	2	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
Vps23_core	PF09454.5	gi|479325483|ref|YP_007865538.1|	-	0.068	12.7	0.2	0.096	12.3	0.1	1.3	1	0	0	1	1	1	0	Vps23	core	domain
DUF2644	PF10841.3	gi|479325483|ref|YP_007865538.1|	-	0.16	11.9	0.0	0.27	11.3	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2644)
DUF904	PF06005.7	gi|479325483|ref|YP_007865538.1|	-	0.19	12.0	0.3	0.19	12.0	0.2	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF904)
Jnk-SapK_ap_N	PF09744.4	gi|479325483|ref|YP_007865538.1|	-	3.8	7.4	8.1	1.3	8.9	3.3	1.8	2	0	0	2	2	2	0	JNK_SAPK-associated	protein-1
Rhodanese	PF00581.15	gi|479325484|ref|YP_007865539.1|	-	2.5e-38	130.9	0.1	9.7e-20	71.0	0.0	2.1	2	0	0	2	2	2	2	Rhodanese-like	domain
DUF442	PF04273.8	gi|479325484|ref|YP_007865539.1|	-	0.082	12.7	0.0	0.13	12.1	0.0	1.3	1	0	0	1	1	1	0	Putative	phosphatase	(DUF442)
DUF2582	PF10771.4	gi|479325484|ref|YP_007865539.1|	-	0.14	12.0	1.9	0.28	11.0	0.1	2.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2582)
NicO	PF03824.11	gi|479325485|ref|YP_007865540.1|	-	5.7e-92	308.0	12.3	5.7e-92	308.0	8.6	1.5	2	0	0	2	2	2	1	High-affinity	nickel-transport	protein
Brr6_like_C_C	PF10104.4	gi|479325485|ref|YP_007865540.1|	-	0.1	12.0	0.9	0.59	9.6	0.6	2.4	1	0	0	1	1	1	0	Di-sulfide	bridge	nucleocytoplasmic	transport	domain
DUF2231	PF09990.4	gi|479325485|ref|YP_007865540.1|	-	1.7	9.0	8.3	0.66	10.3	1.6	3.0	3	0	0	3	3	3	0	Predicted	membrane	protein	(DUF2231)
FAD_binding_2	PF00890.19	gi|479325488|ref|YP_007865543.1|	-	5.9e-46	157.1	0.0	1.9e-45	155.4	0.0	1.7	1	1	0	1	1	1	1	FAD	binding	domain
Succ_DH_flav_C	PF02910.15	gi|479325488|ref|YP_007865543.1|	-	2.2e-10	40.4	0.0	1.1e-07	31.7	0.0	2.3	1	1	1	2	2	2	2	Fumarate	reductase	flavoprotein	C-term
Pyr_redox_2	PF07992.9	gi|479325488|ref|YP_007865543.1|	-	0.00044	20.1	1.3	0.0064	16.3	0.9	2.2	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|479325488|ref|YP_007865543.1|	-	0.0013	17.7	0.0	0.0016	17.3	0.0	1.3	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
GIDA	PF01134.17	gi|479325488|ref|YP_007865543.1|	-	0.0016	17.4	0.0	0.0022	16.9	0.0	1.2	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
NAD_binding_9	PF13454.1	gi|479325488|ref|YP_007865543.1|	-	0.071	12.8	0.1	2.2	8.0	0.0	2.4	2	0	0	2	2	2	0	FAD-NAD(P)-binding
HI0933_like	PF03486.9	gi|479325488|ref|YP_007865543.1|	-	0.14	10.5	0.1	1.7	6.9	0.0	2.1	2	0	0	2	2	2	0	HI0933-like	protein
QRPTase_C	PF01729.14	gi|479325489|ref|YP_007865544.1|	-	4.1e-60	202.1	0.0	5.1e-60	201.8	0.0	1.1	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
QRPTase_N	PF02749.11	gi|479325489|ref|YP_007865544.1|	-	9.6e-15	54.1	0.0	1.8e-14	53.3	0.0	1.5	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
NanE	PF04131.9	gi|479325489|ref|YP_007865544.1|	-	0.025	13.5	0.1	0.47	9.3	0.0	2.2	1	1	1	2	2	2	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
DUF302	PF03625.9	gi|479325490|ref|YP_007865545.1|	-	5.8e-18	64.2	0.0	8e-18	63.7	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF302
PadR	PF03551.9	gi|479325491|ref|YP_007865546.1|	-	3.2e-12	46.0	0.3	4.3e-12	45.6	0.2	1.2	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_12	PF08461.5	gi|479325491|ref|YP_007865546.1|	-	0.011	15.4	0.2	0.02	14.6	0.1	1.5	1	1	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
HTH_45	PF14947.1	gi|479325491|ref|YP_007865546.1|	-	0.034	13.9	0.2	0.056	13.2	0.1	1.5	1	1	0	1	1	1	0	Winged	helix-turn-helix
TrmB	PF01978.14	gi|479325491|ref|YP_007865546.1|	-	0.037	13.7	0.1	0.061	13.0	0.0	1.6	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
MFS_1	PF07690.11	gi|479325492|ref|YP_007865547.1|	-	7.3e-34	117.0	51.1	2.7e-20	72.4	18.1	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_1_like	PF12832.2	gi|479325492|ref|YP_007865547.1|	-	0.00039	20.1	13.4	0.0089	15.8	0.2	4.2	4	0	0	4	4	4	2	MFS_1	like	family
GDE_C	PF06202.9	gi|479325493|ref|YP_007865548.1|	-	3.3e-111	371.5	0.0	4.7e-111	371.0	0.0	1.1	1	0	0	1	1	1	1	Amylo-alpha-1,6-glucosidase
GDE_N	PF12439.3	gi|479325493|ref|YP_007865548.1|	-	1.7e-43	148.4	1.8	2.4e-43	147.9	1.2	1.2	1	0	0	1	1	1	1	Glycogen	debranching	enzyme	N	terminal
DUF608	PF04685.8	gi|479325493|ref|YP_007865548.1|	-	2e-07	30.0	0.1	3.1e-07	29.4	0.1	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF608
Glyco_hydro_100	PF12899.2	gi|479325493|ref|YP_007865548.1|	-	0.00021	19.8	0.1	0.61	8.4	0.0	2.8	3	0	0	3	3	3	2	Alkaline	and	neutral	invertase
Glyco_hydro_15	PF00723.16	gi|479325494|ref|YP_007865549.1|	-	8.6e-17	60.8	0.2	2.8e-13	49.2	0.2	2.4	1	1	1	2	2	2	2	Glycosyl	hydrolases	family	15
NTP_transferase	PF00483.18	gi|479325495|ref|YP_007865550.1|	-	3.2e-34	118.3	0.0	4.3e-34	117.9	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
Hexapep	PF00132.19	gi|479325495|ref|YP_007865550.1|	-	3.4e-07	29.4	12.0	0.091	12.3	0.0	4.9	2	2	2	5	5	5	4	Bacterial	transferase	hexapeptide	(six	repeats)
NTP_transf_3	PF12804.2	gi|479325495|ref|YP_007865550.1|	-	0.0092	16.0	0.0	0.023	14.7	0.0	1.7	2	0	0	2	2	2	1	MobA-like	NTP	transferase	domain
Glyco_hydro_57	PF03065.10	gi|479325496|ref|YP_007865551.1|	-	8e-75	251.9	6.7	8e-75	251.9	4.6	2.3	2	1	0	2	2	2	1	Glycosyl	hydrolase	family	57
Polysacc_deac_1	PF01522.16	gi|479325496|ref|YP_007865551.1|	-	0.0034	17.0	0.0	0.0071	15.9	0.0	1.6	1	0	0	1	1	1	1	Polysaccharide	deacetylase
SynMuv_product	PF06047.6	gi|479325496|ref|YP_007865551.1|	-	0.033	13.9	0.1	0.11	12.2	0.0	1.9	2	0	0	2	2	2	0	Ras-induced	vulval	development	antagonist
PTPlike_phytase	PF14566.1	gi|479325496|ref|YP_007865551.1|	-	0.061	13.3	0.1	0.21	11.6	0.0	1.8	1	1	1	2	2	2	0	Inositol	hexakisphosphate
Glycos_transf_1	PF00534.15	gi|479325497|ref|YP_007865552.1|	-	4.1e-34	117.4	0.0	1e-33	116.1	0.0	1.6	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_transf_5	PF08323.6	gi|479325497|ref|YP_007865552.1|	-	2.6e-28	99.1	0.2	3.9e-28	98.6	0.1	1.2	1	0	0	1	1	1	1	Starch	synthase	catalytic	domain
Glyco_trans_1_4	PF13692.1	gi|479325497|ref|YP_007865552.1|	-	3.4e-11	43.4	0.0	9.5e-11	41.9	0.0	1.7	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.1	gi|479325497|ref|YP_007865552.1|	-	8.6e-07	29.2	0.0	6.6e-06	26.3	0.0	2.2	1	1	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_1_2	PF13524.1	gi|479325497|ref|YP_007865552.1|	-	0.0001	22.4	0.1	0.0041	17.3	0.1	2.6	1	1	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|479325497|ref|YP_007865552.1|	-	0.00024	20.8	0.4	0.004	16.8	0.0	2.3	2	0	0	2	2	2	1	Glycosyltransferase	Family	4
Glyco_trans_4_2	PF13477.1	gi|479325497|ref|YP_007865552.1|	-	0.035	13.9	0.4	9.5	6.0	0.0	2.4	2	0	0	2	2	2	0	Glycosyl	transferase	4-like
RIX1	PF08167.7	gi|479325498|ref|YP_007865553.1|	-	0.029	14.0	1.0	0.19	11.4	0.2	2.3	2	0	0	2	2	2	0	rRNA	processing/ribosome	biogenesis
Dioxygenase_N	PF04444.9	gi|479325498|ref|YP_007865553.1|	-	0.076	13.0	0.2	7.4	6.6	0.0	3.2	2	1	1	3	3	3	0	Catechol	dioxygenase	N	terminus
DAO	PF01266.19	gi|479325499|ref|YP_007865554.1|	-	3.6e-36	124.8	0.0	4.5e-36	124.5	0.0	1.1	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.9	gi|479325499|ref|YP_007865554.1|	-	7.5e-06	25.9	2.0	0.0034	17.2	1.3	2.2	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|479325499|ref|YP_007865554.1|	-	6.1e-05	22.9	0.7	0.00018	21.4	0.4	1.9	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.12	gi|479325499|ref|YP_007865554.1|	-	0.0024	16.9	1.4	0.0069	15.4	0.9	1.8	1	0	0	1	1	1	1	Thi4	family
FAD_binding_3	PF01494.14	gi|479325499|ref|YP_007865554.1|	-	0.0032	16.5	0.5	0.0053	15.8	0.4	1.3	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox_3	PF13738.1	gi|479325499|ref|YP_007865554.1|	-	0.0038	17.3	0.1	0.01	15.9	0.0	1.7	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Trp_halogenase	PF04820.9	gi|479325499|ref|YP_007865554.1|	-	0.045	12.3	0.8	2.2	6.8	0.5	2.1	2	0	0	2	2	2	0	Tryptophan	halogenase
UDPG_MGDP_dh_N	PF03721.9	gi|479325499|ref|YP_007865554.1|	-	0.16	11.3	2.1	0.34	10.2	1.5	1.5	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
FAD_binding_2	PF00890.19	gi|479325499|ref|YP_007865554.1|	-	0.18	10.5	0.6	0.43	9.3	0.4	1.5	1	0	0	1	1	1	0	FAD	binding	domain
ThiF	PF00899.16	gi|479325499|ref|YP_007865554.1|	-	0.23	11.2	0.7	0.48	10.2	0.1	1.9	2	0	0	2	2	2	0	ThiF	family
DUF1955	PF09205.5	gi|479325500|ref|YP_007865555.1|	-	8.6e-74	246.4	11.6	9.8e-74	246.2	8.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1955)
PK	PF00224.16	gi|479325501|ref|YP_007865556.1|	-	2e-83	279.8	2.1	3.4e-83	279.1	1.5	1.3	1	0	0	1	1	1	1	Pyruvate	kinase,	barrel	domain
PK_C	PF02887.11	gi|479325501|ref|YP_007865556.1|	-	2.9e-22	78.4	0.1	9.9e-22	76.6	0.0	1.9	2	0	0	2	2	2	1	Pyruvate	kinase,	alpha/beta	domain
HpcH_HpaI	PF03328.9	gi|479325501|ref|YP_007865556.1|	-	0.001	17.9	0.4	0.0022	16.9	0.0	1.8	2	0	0	2	2	2	1	HpcH/HpaI	aldolase/citrate	lyase	family
Cpn10	PF00166.16	gi|479325501|ref|YP_007865556.1|	-	0.026	14.4	0.0	0.13	12.2	0.0	2.3	1	0	0	1	1	1	0	Chaperonin	10	Kd	subunit
DUF202	PF02656.10	gi|479325502|ref|YP_007865557.1|	-	6e-21	74.4	1.5	3.1e-20	72.1	0.1	1.9	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF202)
Claudin_2	PF13903.1	gi|479325502|ref|YP_007865557.1|	-	0.0012	18.6	2.4	0.0017	18.1	1.7	1.3	1	1	0	1	1	1	1	PMP-22/EMP/MP20/Claudin	tight	junction
DUF2910	PF11139.3	gi|479325502|ref|YP_007865557.1|	-	0.0077	15.3	0.6	0.011	14.8	0.4	1.5	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF2910)
YesK	PF14150.1	gi|479325502|ref|YP_007865557.1|	-	0.016	15.2	8.4	0.09	12.8	1.3	2.1	2	0	0	2	2	2	0	YesK-like	protein
SdpI	PF13630.1	gi|479325502|ref|YP_007865557.1|	-	0.025	14.2	13.8	0.025	14.3	3.7	2.2	1	1	1	2	2	2	0	SdpI/YhfL	protein	family
ABC2_membrane_5	PF13346.1	gi|479325502|ref|YP_007865557.1|	-	0.11	11.7	11.8	0.13	11.4	8.2	1.1	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
DUF1129	PF06570.6	gi|479325502|ref|YP_007865557.1|	-	0.14	11.4	1.9	0.17	11.1	1.3	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1129)
zf-DHHC	PF01529.15	gi|479325502|ref|YP_007865557.1|	-	0.28	10.5	4.8	0.46	9.8	3.3	1.4	1	1	0	1	1	1	0	DHHC	palmitoyltransferase
Cytochrom_B_N	PF00033.14	gi|479325502|ref|YP_007865557.1|	-	0.46	9.7	3.9	0.59	9.4	2.7	1.2	1	0	0	1	1	1	0	Cytochrome	b(N-terminal)/b6/petB
YtpI	PF14007.1	gi|479325502|ref|YP_007865557.1|	-	1.1	9.2	11.5	0.029	14.2	1.7	2.1	1	1	1	2	2	2	0	YtpI-like	protein
Tetraspannin	PF00335.15	gi|479325502|ref|YP_007865557.1|	-	1.3	8.2	10.7	6.3	5.9	7.4	1.8	1	1	0	1	1	1	0	Tetraspanin	family
DUF373	PF04123.8	gi|479325502|ref|YP_007865557.1|	-	1.3	7.9	6.9	1.5	7.7	4.8	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF373)
Neurensin	PF14927.1	gi|479325502|ref|YP_007865557.1|	-	2.2	7.6	6.1	2.8	7.3	1.0	2.3	1	1	1	2	2	2	0	Neurensin
DUF3753	PF12575.3	gi|479325502|ref|YP_007865557.1|	-	2.6	7.8	15.8	1	9.1	2.8	3.0	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF3753)
MARVEL	PF01284.18	gi|479325502|ref|YP_007865557.1|	-	2.7	7.8	9.4	13	5.5	6.5	2.0	1	1	0	1	1	1	0	Membrane-associating	domain
UPF0233	PF06781.7	gi|479325502|ref|YP_007865557.1|	-	3.2	7.4	5.2	17	5.1	0.1	2.5	2	1	0	2	2	2	0	Uncharacterised	protein	family	(UPF0233)
CD20	PF04103.10	gi|479325502|ref|YP_007865557.1|	-	4.3	7.2	7.5	7	6.5	5.2	1.5	1	1	0	1	1	1	0	CD20-like	family
Rib_5-P_isom_A	PF06026.9	gi|479325503|ref|YP_007865558.1|	-	3.1e-37	127.5	0.7	4.7e-37	126.9	0.5	1.2	1	0	0	1	1	1	1	Ribose	5-phosphate	isomerase	A	(phosphoriboisomerase	A)
Sugar-bind	PF04198.8	gi|479325503|ref|YP_007865558.1|	-	0.0024	16.8	0.0	0.0034	16.3	0.0	1.3	1	0	0	1	1	1	1	Putative	sugar-binding	domain
DeoRC	PF00455.17	gi|479325503|ref|YP_007865558.1|	-	0.017	14.7	0.1	0.027	14.1	0.0	1.3	1	0	0	1	1	1	0	DeoR	C	terminal	sensor	domain
Hjc	PF01870.13	gi|479325503|ref|YP_007865558.1|	-	0.098	12.2	0.0	0.89	9.1	0.0	2.2	2	0	0	2	2	2	0	Archaeal	holliday	junction	resolvase	(hjc)
DUF4213	PF13938.1	gi|479325503|ref|YP_007865558.1|	-	0.11	12.6	0.0	0.86	9.7	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4213)
HMGL-like	PF00682.14	gi|479325504|ref|YP_007865559.1|	-	1.2e-67	228.0	1.6	1.9e-67	227.4	1.1	1.3	1	0	0	1	1	1	1	HMGL-like
AsnC_trans_reg	PF01037.16	gi|479325504|ref|YP_007865559.1|	-	3.6e-15	55.4	0.7	2.8e-14	52.5	0.2	2.5	2	0	0	2	2	2	1	AsnC	family
AP_endonuc_2	PF01261.19	gi|479325504|ref|YP_007865559.1|	-	0.00061	19.1	0.1	0.0016	17.7	0.1	1.8	1	0	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
ACT_4	PF13291.1	gi|479325504|ref|YP_007865559.1|	-	0.0018	18.6	6.5	0.038	14.3	0.1	3.9	4	1	1	5	5	5	1	ACT	domain
PdxJ	PF03740.8	gi|479325504|ref|YP_007865559.1|	-	0.0048	16.0	0.4	0.014	14.5	0.2	1.8	1	1	0	1	1	1	1	Pyridoxal	phosphate	biosynthesis	protein	PdxJ
Glyco_hydro_97	PF10566.4	gi|479325504|ref|YP_007865559.1|	-	0.03	13.4	0.0	0.049	12.7	0.0	1.3	1	0	0	1	1	1	0	Glycoside	hydrolase	97
NapD	PF03927.8	gi|479325504|ref|YP_007865559.1|	-	0.037	13.8	0.6	0.23	11.3	0.1	2.6	2	0	0	2	2	2	0	NapD	protein
Radical_SAM	PF04055.16	gi|479325504|ref|YP_007865559.1|	-	0.042	14.0	2.1	0.19	11.8	0.5	2.7	1	1	1	2	2	2	0	Radical	SAM	superfamily
SBDS_C	PF09377.5	gi|479325504|ref|YP_007865559.1|	-	0.058	13.0	0.2	0.3	10.7	0.1	2.1	2	0	0	2	2	2	0	SBDS	protein	C-terminal	domain
DUF816	PF05674.7	gi|479325505|ref|YP_007865560.1|	-	0.006	16.3	0.8	0.0076	15.9	0.6	1.1	1	0	0	1	1	1	1	Baculovirus	protein	of	unknown	function	(DUF816)
MtrG	PF04210.8	gi|479325505|ref|YP_007865560.1|	-	0.031	13.9	0.8	0.49	10.1	0.0	2.2	1	1	1	2	2	2	0	Tetrahydromethanopterin	S-methyltransferase,	subunit	G
Hormone_recep	PF00104.25	gi|479325505|ref|YP_007865560.1|	-	0.045	12.8	0.2	0.068	12.2	0.1	1.4	1	1	0	1	1	1	0	Ligand-binding	domain	of	nuclear	hormone	receptor
DUF1955	PF09205.5	gi|479325505|ref|YP_007865560.1|	-	0.08	12.4	0.5	0.095	12.2	0.4	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1955)
Tricorn_C1	PF14684.1	gi|479325505|ref|YP_007865560.1|	-	0.091	12.6	0.1	0.17	11.7	0.0	1.4	1	0	0	1	1	1	0	Tricorn	protease	C1	domain
Snf7	PF03357.16	gi|479325505|ref|YP_007865560.1|	-	0.12	11.8	2.0	5.7	6.3	0.0	2.0	1	1	1	2	2	2	0	Snf7
AA_kinase	PF00696.23	gi|479325506|ref|YP_007865561.1|	-	2.8e-28	99.1	0.1	3.6e-28	98.7	0.1	1.1	1	0	0	1	1	1	1	Amino	acid	kinase	family
HAD	PF12710.2	gi|479325506|ref|YP_007865561.1|	-	0.023	14.8	0.0	0.21	11.7	0.0	2.1	1	1	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
Helicase_C_3	PF13625.1	gi|479325506|ref|YP_007865561.1|	-	0.059	13.1	0.0	0.11	12.1	0.0	1.5	1	0	0	1	1	1	0	Helicase	conserved	C-terminal	domain
Cren7	PF11520.3	gi|479325507|ref|YP_007865562.1|	-	2.6e-31	107.0	2.1	2.9e-31	106.9	1.4	1.0	1	0	0	1	1	1	1	Chromatin	protein	Cren7
DUF4585	PF15232.1	gi|479325507|ref|YP_007865562.1|	-	0.09	12.6	0.1	0.17	11.7	0.0	1.5	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4585)
adh_short_C2	PF13561.1	gi|479325508|ref|YP_007865563.1|	-	1.2e-22	80.8	0.0	1.5e-22	80.5	0.0	1.1	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|479325508|ref|YP_007865563.1|	-	1.7e-14	54.0	0.0	2.4e-14	53.6	0.0	1.3	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|479325508|ref|YP_007865563.1|	-	0.00022	20.9	0.0	0.00034	20.3	0.0	1.3	1	0	0	1	1	1	1	KR	domain
NAD_binding_10	PF13460.1	gi|479325508|ref|YP_007865563.1|	-	0.00022	21.2	0.0	0.00081	19.4	0.0	1.8	1	1	0	1	1	1	1	NADH(P)-binding
3HCDH_N	PF02737.13	gi|479325508|ref|YP_007865563.1|	-	0.0095	15.6	0.0	0.017	14.8	0.0	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.12	gi|479325508|ref|YP_007865563.1|	-	0.029	14.7	0.0	0.11	12.9	0.0	1.9	2	0	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
Shikimate_DH	PF01488.15	gi|479325508|ref|YP_007865563.1|	-	0.056	13.5	0.0	0.1	12.7	0.0	1.5	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
THF_DHG_CYH_C	PF02882.14	gi|479325508|ref|YP_007865563.1|	-	0.095	11.7	0.1	0.27	10.3	0.1	1.7	2	0	0	2	2	2	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
NAD_binding_2	PF03446.10	gi|479325509|ref|YP_007865564.1|	-	1.1e-35	122.8	0.2	1.6e-35	122.3	0.1	1.2	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_binding_11	PF14833.1	gi|479325509|ref|YP_007865564.1|	-	1e-28	99.8	0.0	1.5e-28	99.2	0.0	1.2	1	0	0	1	1	1	1	NAD-binding	of	NADP-dependent	3-hydroxyisobutyrate	dehydrogenase
F420_oxidored	PF03807.12	gi|479325509|ref|YP_007865564.1|	-	9.9e-11	41.9	0.5	3e-10	40.4	0.1	2.0	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
2-Hacid_dh_C	PF02826.14	gi|479325509|ref|YP_007865564.1|	-	3.4e-06	26.3	0.1	6.3e-06	25.4	0.1	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Shikimate_DH	PF01488.15	gi|479325509|ref|YP_007865564.1|	-	0.00057	19.9	0.1	0.0011	19.0	0.1	1.5	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
GFO_IDH_MocA	PF01408.17	gi|479325509|ref|YP_007865564.1|	-	0.00063	20.2	0.0	0.0012	19.3	0.0	1.5	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
IlvN	PF07991.7	gi|479325509|ref|YP_007865564.1|	-	0.0016	17.8	0.1	0.0032	16.8	0.1	1.5	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
OCD_Mu_crystall	PF02423.10	gi|479325509|ref|YP_007865564.1|	-	0.0028	16.4	0.0	0.0049	15.6	0.0	1.4	1	0	0	1	1	1	1	Ornithine	cyclodeaminase/mu-crystallin	family
3HCDH_N	PF02737.13	gi|479325509|ref|YP_007865564.1|	-	0.0046	16.6	0.0	0.0092	15.6	0.0	1.6	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
ApbA	PF02558.11	gi|479325509|ref|YP_007865564.1|	-	0.0074	15.7	0.0	0.024	14.1	0.0	1.8	2	0	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
5_3_exonuc_N	PF02739.11	gi|479325509|ref|YP_007865564.1|	-	0.031	13.6	0.0	0.077	12.3	0.0	1.6	1	0	0	1	1	1	0	5'-3'	exonuclease,	N-terminal	resolvase-like	domain
UDPG_MGDP_dh_N	PF03721.9	gi|479325509|ref|YP_007865564.1|	-	0.1	11.9	1.5	1.3	8.4	0.1	2.8	2	1	1	3	3	3	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
UDPG_MGDP_dh_C	PF03720.10	gi|479325509|ref|YP_007865564.1|	-	0.11	12.6	0.0	0.28	11.3	0.0	1.6	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
NAD_Gly3P_dh_N	PF01210.18	gi|479325509|ref|YP_007865564.1|	-	0.15	11.7	0.4	2.6	7.7	0.1	2.8	2	1	0	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
THUMP	PF02926.12	gi|479325510|ref|YP_007865565.1|	-	0.00015	21.7	0.2	0.00038	20.3	0.2	1.7	1	0	0	1	1	1	1	THUMP	domain
SRP54	PF00448.17	gi|479325511|ref|YP_007865566.1|	-	4.4e-72	241.6	0.2	6.1e-72	241.1	0.2	1.2	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SRP_SPB	PF02978.14	gi|479325511|ref|YP_007865566.1|	-	1.4e-31	108.8	0.4	5.6e-29	100.4	0.0	2.5	2	0	0	2	2	2	1	Signal	peptide	binding	domain
SRP54_N	PF02881.14	gi|479325511|ref|YP_007865566.1|	-	6e-13	48.6	1.8	1.1e-11	44.6	0.4	3.1	2	0	0	2	2	2	1	SRP54-type	protein,	helical	bundle	domain
CbiA	PF01656.18	gi|479325511|ref|YP_007865566.1|	-	5e-08	32.5	0.1	1.7e-07	30.8	0.1	1.9	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
MobB	PF03205.9	gi|479325511|ref|YP_007865566.1|	-	1.4e-05	24.7	1.0	5.7e-05	22.8	0.1	2.2	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_22	PF13401.1	gi|479325511|ref|YP_007865566.1|	-	2.8e-05	24.2	0.0	0.00013	22.0	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
cobW	PF02492.14	gi|479325511|ref|YP_007865566.1|	-	9.2e-05	21.9	0.1	0.00044	19.7	0.1	2.0	1	1	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
Zeta_toxin	PF06414.7	gi|479325511|ref|YP_007865566.1|	-	0.00021	20.4	0.0	0.00042	19.4	0.0	1.4	1	0	0	1	1	1	1	Zeta	toxin
AAA_33	PF13671.1	gi|479325511|ref|YP_007865566.1|	-	0.0011	18.9	0.0	0.0026	17.6	0.0	1.7	2	0	0	2	2	1	1	AAA	domain
ArgK	PF03308.11	gi|479325511|ref|YP_007865566.1|	-	0.0015	17.3	0.1	0.0052	15.6	0.0	1.9	2	0	0	2	2	2	1	ArgK	protein
AAA_17	PF13207.1	gi|479325511|ref|YP_007865566.1|	-	0.0016	19.2	2.1	0.0047	17.7	0.1	2.7	3	2	0	3	3	3	1	AAA	domain
AAA_18	PF13238.1	gi|479325511|ref|YP_007865566.1|	-	0.0024	18.1	1.0	0.007	16.6	0.0	2.4	3	1	0	3	3	1	1	AAA	domain
AAA_30	PF13604.1	gi|479325511|ref|YP_007865566.1|	-	0.011	15.3	0.3	0.069	12.7	0.1	2.4	2	1	0	2	2	2	0	AAA	domain
MMR_HSR1	PF01926.18	gi|479325511|ref|YP_007865566.1|	-	0.016	15.1	0.3	0.062	13.2	0.2	2.0	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
6PF2K	PF01591.13	gi|479325511|ref|YP_007865566.1|	-	0.023	13.7	0.0	0.046	12.7	0.0	1.5	1	0	0	1	1	1	0	6-phosphofructo-2-kinase
AAA_10	PF12846.2	gi|479325511|ref|YP_007865566.1|	-	0.023	14.1	0.3	0.067	12.6	0.1	1.5	1	1	0	1	1	1	0	AAA-like	domain
AAA_31	PF13614.1	gi|479325511|ref|YP_007865566.1|	-	0.036	13.9	0.0	0.58	10.0	0.0	2.7	2	1	0	2	2	2	0	AAA	domain
AAA_28	PF13521.1	gi|479325511|ref|YP_007865566.1|	-	0.036	14.0	0.0	0.085	12.8	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
ATP_bind_1	PF03029.12	gi|479325511|ref|YP_007865566.1|	-	0.042	13.4	0.1	0.27	10.7	0.0	2.3	3	0	0	3	3	3	0	Conserved	hypothetical	ATP	binding	protein
DUF3629	PF12302.3	gi|479325511|ref|YP_007865566.1|	-	0.072	12.4	0.3	0.12	11.7	0.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3629)
ArsA_ATPase	PF02374.10	gi|479325511|ref|YP_007865566.1|	-	0.072	12.1	0.5	5.3	5.9	0.0	2.9	3	0	0	3	3	3	0	Anion-transporting	ATPase
Thymidylate_kin	PF02223.12	gi|479325511|ref|YP_007865566.1|	-	0.27	10.6	1.9	0.77	9.0	0.1	2.7	4	0	0	4	4	4	0	Thymidylate	kinase
eIF-5a	PF01287.15	gi|479325512|ref|YP_007865567.1|	-	1.3e-14	53.9	0.4	2.1e-14	53.1	0.3	1.4	1	0	0	1	1	1	1	Eukaryotic	elongation	factor	5A	hypusine,	DNA-binding	OB	fold
EFP_N	PF08207.7	gi|479325512|ref|YP_007865567.1|	-	1.3e-05	24.9	0.0	2.4e-05	24.0	0.0	1.4	1	0	0	1	1	1	1	Elongation	factor	P	(EF-P)	KOW-like	domain
KOW	PF00467.24	gi|479325512|ref|YP_007865567.1|	-	0.00085	18.9	1.4	0.0025	17.4	1.0	1.8	1	0	0	1	1	1	1	KOW	motif
EFP	PF01132.15	gi|479325512|ref|YP_007865567.1|	-	0.018	14.7	0.4	0.036	13.7	0.2	1.5	1	0	0	1	1	1	0	Elongation	factor	P	(EF-P)	OB	domain
TP6A_N	PF04406.9	gi|479325513|ref|YP_007865568.1|	-	9.9e-24	82.7	0.1	1.7e-23	82.0	0.1	1.4	1	0	0	1	1	1	1	Type	IIB	DNA	topoisomerase
HAD_2	PF13419.1	gi|479325513|ref|YP_007865568.1|	-	0.033	14.4	0.0	0.073	13.2	0.0	1.5	1	0	0	1	1	1	0	Haloacid	dehalogenase-like	hydrolase
DUF2399	PF09664.5	gi|479325513|ref|YP_007865568.1|	-	0.091	12.6	0.0	0.17	11.7	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	C-terminus	(DUF2399)
Topo-VIb_trans	PF09239.6	gi|479325514|ref|YP_007865569.1|	-	4.2e-68	227.9	0.3	7.5e-68	227.0	0.2	1.4	1	0	0	1	1	1	1	Topoisomerase	VI	B	subunit,	transducer
HATPase_c_3	PF13589.1	gi|479325514|ref|YP_007865569.1|	-	3e-14	52.8	0.0	8.4e-14	51.3	0.0	1.7	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c	PF02518.21	gi|479325514|ref|YP_007865569.1|	-	2.1e-12	46.7	0.0	4.2e-12	45.7	0.0	1.4	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
FbpA	PF05833.6	gi|479325514|ref|YP_007865569.1|	-	6.3e-08	31.5	0.0	6.3e-08	31.5	0.0	2.1	2	0	0	2	2	2	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
Ribosomal_S13	PF00416.17	gi|479325514|ref|YP_007865569.1|	-	4e-05	24.0	0.4	0.00032	21.1	0.0	2.5	2	0	0	2	2	2	1	Ribosomal	protein	S13/S18
H2TH	PF06831.9	gi|479325514|ref|YP_007865569.1|	-	0.0022	17.6	0.2	0.013	15.2	0.0	2.2	2	0	0	2	2	2	1	Formamidopyrimidine-DNA	glycosylase	H2TH	domain
DS	PF01916.12	gi|479325515|ref|YP_007865570.1|	-	2e-80	270.1	0.1	2.2e-80	269.9	0.0	1.0	1	0	0	1	1	1	1	Deoxyhypusine	synthase
RtcB	PF01139.12	gi|479325516|ref|YP_007865571.1|	-	3e-150	500.8	0.1	3.4e-150	500.7	0.1	1.0	1	0	0	1	1	1	1	tRNA-splicing	ligase	RtcB
zf-FCS	PF06467.9	gi|479325517|ref|YP_007865572.1|	-	0.0053	16.3	0.6	0.0094	15.5	0.4	1.5	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
Ta0938	PF11494.3	gi|479325517|ref|YP_007865572.1|	-	0.014	15.4	0.1	0.015	15.3	0.1	1.2	1	0	0	1	1	1	0	Ta0938
zf-C2H2_6	PF13912.1	gi|479325517|ref|YP_007865572.1|	-	0.022	14.6	0.1	0.037	13.9	0.1	1.4	1	0	0	1	1	1	0	C2H2-type	zinc	finger
ZZ	PF00569.12	gi|479325517|ref|YP_007865572.1|	-	0.073	12.6	0.1	0.15	11.6	0.1	1.5	1	0	0	1	1	1	0	Zinc	finger,	ZZ	type
zf-C2H2	PF00096.21	gi|479325517|ref|YP_007865572.1|	-	0.12	12.8	0.3	0.12	12.8	0.2	1.8	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
zf-C2HC_2	PF13913.1	gi|479325517|ref|YP_007865572.1|	-	0.34	10.6	0.3	0.34	10.6	0.2	1.8	2	0	0	2	2	2	0	zinc-finger	of	a	C2HC-type
Rad50_zn_hook	PF04423.9	gi|479325517|ref|YP_007865572.1|	-	0.47	9.9	3.3	0.59	9.6	0.1	2.2	2	0	0	2	2	2	0	Rad50	zinc	hook	motif
DUF2175	PF09943.4	gi|479325517|ref|YP_007865572.1|	-	0.68	10.0	3.3	8.8	6.4	2.3	2.1	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2175)
zf-H2C2_2	PF13465.1	gi|479325517|ref|YP_007865572.1|	-	0.71	10.2	3.3	2.5	8.5	0.3	2.3	2	0	0	2	2	2	0	Zinc-finger	double	domain
DEAD	PF00270.24	gi|479325518|ref|YP_007865573.1|	-	2e-27	95.7	0.0	5.4e-27	94.3	0.0	1.7	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
DEAD_assoc	PF08494.6	gi|479325518|ref|YP_007865573.1|	-	1.9e-20	73.3	0.2	2.6e-19	69.6	0.0	2.9	3	1	0	3	3	3	1	DEAD/H	associated
Helicase_C	PF00271.26	gi|479325518|ref|YP_007865573.1|	-	1.3e-10	41.0	0.1	1.9e-09	37.2	0.0	3.0	4	0	0	4	4	4	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|479325518|ref|YP_007865573.1|	-	1.6e-05	24.7	0.0	6.1e-05	22.9	0.0	2.0	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
HTH_20	PF12840.2	gi|479325518|ref|YP_007865573.1|	-	0.0002	21.1	0.2	0.0097	15.6	0.0	2.6	2	0	0	2	2	2	1	Helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|479325518|ref|YP_007865573.1|	-	0.0022	17.9	0.0	1.7	8.6	0.0	3.6	3	0	0	3	3	3	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_5	PF01022.15	gi|479325518|ref|YP_007865573.1|	-	0.0031	17.1	0.0	0.01	15.4	0.0	1.9	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
IL7	PF01415.11	gi|479325518|ref|YP_007865573.1|	-	0.0054	16.3	0.1	0.022	14.3	0.1	2.1	1	0	0	1	1	1	1	Interleukin	7/9	family
KOW	PF00467.24	gi|479325518|ref|YP_007865573.1|	-	0.025	14.3	0.1	0.74	9.6	0.0	3.3	3	0	0	3	3	3	0	KOW	motif
HTH_32	PF13565.1	gi|479325518|ref|YP_007865573.1|	-	0.1	13.4	0.6	0.43	11.4	0.0	2.5	2	0	0	2	2	2	0	Homeodomain-like	domain
Alba	PF01918.16	gi|479325519|ref|YP_007865574.1|	-	6.6e-14	51.2	0.3	7.9e-14	50.9	0.2	1.1	1	0	0	1	1	1	1	Alba
Rpp20	PF12328.3	gi|479325519|ref|YP_007865574.1|	-	0.055	13.1	0.1	0.068	12.8	0.0	1.3	1	1	0	1	1	1	0	Rpp20	subunit	of	nuclear	RNase	MRP	and	P
Topoisom_bac	PF01131.15	gi|479325520|ref|YP_007865575.1|	-	4.4e-88	295.8	0.2	7.6e-88	295.0	0.2	1.4	1	0	0	1	1	1	1	DNA	topoisomerase
Toprim	PF01751.17	gi|479325520|ref|YP_007865575.1|	-	2.6e-22	78.6	0.0	1.2e-21	76.5	0.0	2.3	1	0	0	1	1	1	1	Toprim	domain
DEAD	PF00270.24	gi|479325520|ref|YP_007865575.1|	-	2.2e-09	37.0	0.4	5.2e-08	32.5	0.3	2.9	2	1	0	2	2	2	1	DEAD/DEAH	box	helicase
ResIII	PF04851.10	gi|479325520|ref|YP_007865575.1|	-	1.6e-05	24.7	0.5	7.1e-05	22.7	0.0	2.3	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Toprim_4	PF13662.1	gi|479325520|ref|YP_007865575.1|	-	0.0014	18.5	0.0	0.0046	16.9	0.0	1.9	1	0	0	1	1	1	1	Toprim	domain
HypA	PF01155.14	gi|479325520|ref|YP_007865575.1|	-	0.011	15.4	1.1	0.089	12.4	0.1	2.6	2	0	0	2	2	2	0	Hydrogenase	expression/synthesis	hypA	family
NOB1_Zn_bind	PF08772.6	gi|479325520|ref|YP_007865575.1|	-	0.011	15.5	0.5	0.28	11.0	0.1	2.8	2	0	0	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
zf-ribbon_3	PF13248.1	gi|479325520|ref|YP_007865575.1|	-	0.02	14.0	6.2	0.37	10.0	1.1	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
PspA_IM30	PF04012.7	gi|479325520|ref|YP_007865575.1|	-	0.31	10.3	0.3	0.66	9.2	0.2	1.4	1	0	0	1	1	1	0	PspA/IM30	family
DUF1272	PF06906.6	gi|479325520|ref|YP_007865575.1|	-	0.81	9.5	4.0	1.5	8.7	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1272)
zf-RING_3	PF14369.1	gi|479325520|ref|YP_007865575.1|	-	0.84	9.6	6.5	1.2	9.2	1.0	2.4	2	0	0	2	2	2	0	zinc-finger
zinc_ribbon_2	PF13240.1	gi|479325520|ref|YP_007865575.1|	-	1.1	8.8	6.0	6.4	6.3	0.9	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
UPF0547	PF10571.4	gi|479325520|ref|YP_007865575.1|	-	2.4	7.9	5.1	5.9	6.6	0.7	2.4	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
OrfB_Zn_ribbon	PF07282.6	gi|479325520|ref|YP_007865575.1|	-	3.1	7.5	6.6	4	7.1	0.9	3.1	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
DZR	PF12773.2	gi|479325520|ref|YP_007865575.1|	-	8.5	6.2	7.0	5.9	6.7	0.7	2.3	2	0	0	2	2	2	0	Double	zinc	ribbon
Alba	PF01918.16	gi|479325521|ref|YP_007865576.1|	-	3.3e-19	68.2	0.6	4.6e-19	67.7	0.4	1.2	1	0	0	1	1	1	1	Alba
YjzC	PF14168.1	gi|479325522|ref|YP_007865577.1|	-	0.04	13.8	0.1	0.076	12.9	0.0	1.5	2	0	0	2	2	2	0	YjzC-like	protein
PKD	PF00801.15	gi|479325522|ref|YP_007865577.1|	-	0.041	13.6	0.0	0.057	13.1	0.0	1.2	1	0	0	1	1	1	0	PKD	domain
ResIII	PF04851.10	gi|479325525|ref|YP_007865580.1|	-	5.5e-23	81.7	0.4	3.4e-21	75.8	0.1	3.2	2	1	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.26	gi|479325525|ref|YP_007865580.1|	-	2.7e-19	68.8	0.1	4.3e-18	64.9	0.0	2.5	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
DEAD	PF00270.24	gi|479325525|ref|YP_007865580.1|	-	1.5e-09	37.5	0.0	3.7e-08	33.0	0.0	2.7	2	1	0	2	2	2	1	DEAD/DEAH	box	helicase
SNF2_N	PF00176.18	gi|479325525|ref|YP_007865580.1|	-	1.2e-08	34.1	0.1	1.2e-07	30.8	0.1	2.4	1	1	0	1	1	1	1	SNF2	family	N-terminal	domain
Sigma70_ECF	PF07638.6	gi|479325525|ref|YP_007865580.1|	-	0.0069	16.0	0.1	0.014	15.0	0.0	1.5	1	0	0	1	1	1	1	ECF	sigma	factor
DDE_Tnp_IS66_C	PF13817.1	gi|479325525|ref|YP_007865580.1|	-	0.011	15.7	0.0	0.044	13.8	0.0	2.0	2	0	0	2	2	2	0	IS66	C-terminal	element
Helicase_C_2	PF13307.1	gi|479325525|ref|YP_007865580.1|	-	0.034	14.0	3.2	0.071	13.0	0.0	3.0	2	2	1	3	3	3	0	Helicase	C-terminal	domain
LAGLIDADG_1	PF00961.14	gi|479325525|ref|YP_007865580.1|	-	5.3	7.6	10.7	0.87	10.1	0.4	3.3	3	0	0	3	3	3	0	LAGLIDADG	endonuclease
Glu-tRNAGln	PF02686.10	gi|479325527|ref|YP_007865582.1|	-	1.3e-19	69.7	0.1	1.7e-19	69.4	0.1	1.1	1	0	0	1	1	1	1	Glu-tRNAGln	amidotransferase	C	subunit
RIO1	PF01163.17	gi|479325527|ref|YP_007865582.1|	-	0.0097	15.2	0.1	0.013	14.8	0.1	1.3	1	0	0	1	1	1	1	RIO1	family
SporV_AA	PF12164.3	gi|479325527|ref|YP_007865582.1|	-	0.022	14.7	1.1	0.03	14.3	0.8	1.2	1	0	0	1	1	1	0	Stage	V	sporulation	protein	AA
DUF717	PF05338.7	gi|479325527|ref|YP_007865582.1|	-	0.091	12.7	1.4	13	5.7	0.0	3.0	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF717)
Amidase	PF01425.16	gi|479325528|ref|YP_007865583.1|	-	7.8e-135	450.1	0.0	8.9e-135	449.9	0.0	1.0	1	0	0	1	1	1	1	Amidase
Wyosine_form	PF08608.7	gi|479325529|ref|YP_007865584.1|	-	1.4e-23	82.7	0.0	4.5e-23	81.1	0.0	1.9	1	0	0	1	1	1	1	Wyosine	base	formation
Radical_SAM	PF04055.16	gi|479325529|ref|YP_007865584.1|	-	2.1e-20	73.5	0.2	9.4e-20	71.4	0.0	2.1	2	1	0	2	2	2	1	Radical	SAM	superfamily
CTP-dep_RFKase	PF01982.11	gi|479325530|ref|YP_007865585.1|	-	4e-42	142.6	0.0	5.9e-42	142.1	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF120
HTH_1	PF00126.22	gi|479325530|ref|YP_007865585.1|	-	0.00074	19.2	0.0	0.0012	18.5	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
HTH_45	PF14947.1	gi|479325530|ref|YP_007865585.1|	-	0.018	14.8	0.0	0.029	14.2	0.0	1.3	1	0	0	1	1	1	0	Winged	helix-turn-helix
HxlR	PF01638.12	gi|479325530|ref|YP_007865585.1|	-	0.028	14.0	0.0	0.048	13.3	0.0	1.4	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
Antitoxin-MazE	PF04014.13	gi|479325530|ref|YP_007865585.1|	-	0.034	13.8	0.9	0.15	11.8	0.0	2.4	2	0	0	2	2	2	0	Antidote-toxin	recognition	MazE
HTH_27	PF13463.1	gi|479325530|ref|YP_007865585.1|	-	0.04	14.2	0.0	0.077	13.3	0.0	1.5	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|479325530|ref|YP_007865585.1|	-	0.045	13.4	0.1	0.11	12.2	0.0	1.7	2	0	0	2	2	2	0	MarR	family
MarR	PF01047.17	gi|479325530|ref|YP_007865585.1|	-	0.12	12.0	0.1	0.23	11.2	0.1	1.4	1	0	0	1	1	1	0	MarR	family
HemN_C	PF06969.11	gi|479325530|ref|YP_007865585.1|	-	0.12	12.4	0.1	0.25	11.4	0.0	1.5	1	0	0	1	1	1	0	HemN	C-terminal	domain
DUF357	PF04010.8	gi|479325531|ref|YP_007865586.1|	-	1.8e-20	72.3	3.0	4.9e-20	71.0	2.1	1.8	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF357)
CTP_transf_2	PF01467.21	gi|479325531|ref|YP_007865586.1|	-	7.2e-11	42.3	0.1	1.5e-10	41.3	0.0	1.5	1	1	0	1	1	1	1	Cytidylyltransferase
Phage_Mu_Gam	PF07352.7	gi|479325531|ref|YP_007865586.1|	-	0.042	13.3	0.4	0.29	10.6	0.0	2.3	2	0	0	2	2	2	0	Bacteriophage	Mu	Gam	like	protein
FAD_syn	PF06574.7	gi|479325531|ref|YP_007865586.1|	-	0.082	12.5	0.0	0.27	10.8	0.0	2.0	1	1	0	1	1	1	0	FAD	synthetase
Radical_SAM	PF04055.16	gi|479325531|ref|YP_007865586.1|	-	0.096	12.8	2.3	0.15	12.2	0.9	1.9	1	1	1	2	2	2	0	Radical	SAM	superfamily
ERp29	PF07749.7	gi|479325531|ref|YP_007865586.1|	-	0.1	13.2	2.3	1.7	9.3	0.0	2.8	3	1	1	4	4	4	0	Endoplasmic	reticulum	protein	ERp29,	C-terminal	domain
Peripla_BP_2	PF01497.13	gi|479325531|ref|YP_007865586.1|	-	0.11	11.5	0.1	2.1	7.4	0.0	2.1	2	0	0	2	2	2	0	Periplasmic	binding	protein
TP_methylase	PF00590.15	gi|479325532|ref|YP_007865587.1|	-	6.6e-21	74.9	0.0	8.1e-21	74.6	0.0	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
Metallophos	PF00149.23	gi|479325533|ref|YP_007865588.1|	-	5.2e-05	22.7	0.6	0.00015	21.2	0.4	1.8	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|479325533|ref|YP_007865588.1|	-	5.7e-05	23.0	0.1	0.0001	22.1	0.1	1.6	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Ribosomal_L4	PF00573.17	gi|479325533|ref|YP_007865588.1|	-	0.0052	16.1	0.1	0.008	15.5	0.1	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L4/L1	family
Cpn60_TCP1	PF00118.19	gi|479325533|ref|YP_007865588.1|	-	0.012	14.2	0.1	0.014	14.0	0.1	1.2	1	0	0	1	1	1	0	TCP-1/cpn60	chaperonin	family
Ins_allergen_rp	PF06757.8	gi|479325533|ref|YP_007865588.1|	-	0.045	13.2	0.1	0.071	12.6	0.0	1.4	1	0	0	1	1	1	0	Insect	allergen	related	repeat,	nitrile-specifier	detoxification
Peptidase_M55	PF04951.8	gi|479325533|ref|YP_007865588.1|	-	0.095	11.9	0.0	0.14	11.2	0.0	1.2	1	0	0	1	1	1	0	D-aminopeptidase
HAD	PF12710.2	gi|479325533|ref|YP_007865588.1|	-	0.099	12.7	0.0	0.12	12.5	0.0	1.2	1	0	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
Latexin	PF06907.7	gi|479325533|ref|YP_007865588.1|	-	0.13	11.3	0.1	0.18	10.9	0.0	1.2	1	0	0	1	1	1	0	Latexin
TBP	PF00352.16	gi|479325534|ref|YP_007865589.1|	-	1e-60	201.0	0.2	6.4e-34	115.1	0.0	2.0	2	0	0	2	2	2	2	Transcription	factor	TFIID	(or	TATA-binding	protein,	TBP)
DUF3378	PF11858.3	gi|479325534|ref|YP_007865589.1|	-	6e-06	26.2	0.0	0.068	13.2	0.0	2.4	2	1	0	2	2	2	2	Domain	of	unknown	function	(DUF3378)
HMA	PF00403.21	gi|479325534|ref|YP_007865589.1|	-	0.31	11.2	1.9	1.9	8.6	0.2	2.4	2	0	0	2	2	2	0	Heavy-metal-associated	domain
Spore_YhaL	PF14147.1	gi|479325534|ref|YP_007865589.1|	-	0.74	9.2	4.2	1.9	7.9	0.0	2.6	3	0	0	3	3	3	0	Sporulation	protein	YhaL
BcrAD_BadFG	PF01869.15	gi|479325535|ref|YP_007865590.1|	-	8.3e-14	51.5	0.0	1.4e-13	50.7	0.0	1.3	1	1	0	1	1	1	1	BadF/BadG/BcrA/BcrD	ATPase	family
GDA1_CD39	PF01150.12	gi|479325535|ref|YP_007865590.1|	-	0.0017	16.9	0.1	0.0032	16.0	0.0	1.4	1	0	0	1	1	1	1	GDA1/CD39	(nucleoside	phosphatase)	family
DOG1	PF14144.1	gi|479325535|ref|YP_007865590.1|	-	0.0035	17.3	0.0	0.027	14.5	0.0	2.2	2	0	0	2	2	2	1	Seed	dormancy	control
DUF4468	PF14730.1	gi|479325535|ref|YP_007865590.1|	-	0.022	14.4	0.0	0.06	13.0	0.0	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4468)	with	TBP-like	fold
Hydantoinase_A	PF01968.13	gi|479325535|ref|YP_007865590.1|	-	0.11	11.6	0.0	0.34	9.9	0.0	1.8	2	0	0	2	2	2	0	Hydantoinase/oxoprolinase
DUF373	PF04123.8	gi|479325537|ref|YP_007865592.1|	-	8.1e-104	347.3	22.8	9.2e-104	347.1	15.8	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF373)
DUF4201	PF13870.1	gi|479325538|ref|YP_007865593.1|	-	0.00021	20.7	5.5	0.00021	20.7	3.8	4.1	1	1	3	4	4	4	1	Domain	of	unknown	function	(DUF4201)
IncA	PF04156.9	gi|479325538|ref|YP_007865593.1|	-	0.00021	20.9	54.0	0.00045	19.8	15.2	3.2	1	1	1	2	2	2	1	IncA	protein
Reo_sigmaC	PF04582.7	gi|479325538|ref|YP_007865593.1|	-	0.00091	18.4	9.2	0.0012	18.0	3.7	2.2	1	1	1	2	2	2	1	Reovirus	sigma	C	capsid	protein
HsbA	PF12296.3	gi|479325538|ref|YP_007865593.1|	-	0.00099	18.9	13.6	0.32	10.8	0.2	4.3	2	2	2	4	4	4	2	Hydrophobic	surface	binding	protein	A
ATG16	PF08614.6	gi|479325538|ref|YP_007865593.1|	-	0.0032	17.3	17.7	0.0032	17.3	12.2	3.4	1	1	3	4	4	4	2	Autophagy	protein	16	(ATG16)
DUF3450	PF11932.3	gi|479325538|ref|YP_007865593.1|	-	0.004	16.4	8.6	0.004	16.4	6.0	3.1	1	1	2	3	3	3	1	Protein	of	unknown	function	(DUF3450)
TMF_DNA_bd	PF12329.3	gi|479325538|ref|YP_007865593.1|	-	0.0057	16.4	17.7	0.0057	16.4	12.3	5.6	1	1	4	6	6	5	2	TATA	element	modulatory	factor	1	DNA	binding
MCPsignal	PF00015.16	gi|479325538|ref|YP_007865593.1|	-	0.0063	16.0	24.9	0.62	9.5	7.4	2.6	1	1	1	2	2	2	2	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
Baculo_PEP_C	PF04513.7	gi|479325538|ref|YP_007865593.1|	-	0.015	15.1	11.4	0.015	15.1	7.9	3.5	1	1	2	3	3	3	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
DUF3584	PF12128.3	gi|479325538|ref|YP_007865593.1|	-	0.042	11.1	44.9	0.056	10.7	31.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
T4SS	PF07996.6	gi|479325538|ref|YP_007865593.1|	-	0.044	13.6	26.5	0.19	11.5	9.0	2.5	1	1	1	2	2	2	0	Type	IV	secretion	system	proteins
Mnd1	PF03962.10	gi|479325538|ref|YP_007865593.1|	-	0.076	12.6	55.3	0.35	10.5	10.5	3.3	1	1	2	3	3	3	0	Mnd1	family
AAA_13	PF13166.1	gi|479325538|ref|YP_007865593.1|	-	0.097	11.1	59.0	0.057	11.8	27.7	2.1	1	1	1	2	2	2	0	AAA	domain
Cluap1	PF10234.4	gi|479325538|ref|YP_007865593.1|	-	0.1	11.8	48.6	0.0089	15.2	19.8	2.5	1	1	1	2	2	2	0	Clusterin-associated	protein-1
AAA_27	PF13514.1	gi|479325538|ref|YP_007865593.1|	-	0.3	8.7	40.1	2.1	5.9	18.2	2.3	1	1	1	2	2	2	0	AAA	domain
Syntaxin	PF00804.20	gi|479325538|ref|YP_007865593.1|	-	0.43	10.7	59.0	6	7.0	13.4	4.1	1	1	3	4	4	4	0	Syntaxin
HalX	PF08663.5	gi|479325538|ref|YP_007865593.1|	-	0.64	10.0	10.6	3.4	7.7	0.1	4.6	3	3	2	5	5	5	0	HalX	domain
Atg14	PF10186.4	gi|479325538|ref|YP_007865593.1|	-	1.1	8.0	62.4	0.27	10.1	9.8	3.2	1	1	2	3	3	3	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
Nup88	PF10168.4	gi|479325538|ref|YP_007865593.1|	-	1.3	6.8	51.2	3.7	5.2	21.2	2.1	1	1	1	2	2	2	0	Nuclear	pore	component
DUF972	PF06156.8	gi|479325538|ref|YP_007865593.1|	-	1.5	9.2	55.9	0.039	14.2	8.7	5.0	1	1	4	5	5	5	0	Protein	of	unknown	function	(DUF972)
TBPIP	PF07106.8	gi|479325538|ref|YP_007865593.1|	-	4.4	6.8	64.5	0.064	12.8	15.1	3.7	1	1	3	4	4	4	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
MbeD_MobD	PF04899.7	gi|479325538|ref|YP_007865593.1|	-	4.7	7.1	9.8	1.7	8.6	0.1	4.0	3	1	2	5	5	5	0	MbeD/MobD	like
V-ATPase_C	PF03223.10	gi|479325538|ref|YP_007865593.1|	-	5.8	5.7	27.9	0.5	9.2	1.4	3.7	1	1	2	3	3	3	0	V-ATPase	subunit	C
Tropomyosin_1	PF12718.2	gi|479325538|ref|YP_007865593.1|	-	6.1	6.6	62.9	38	4.1	20.6	3.5	1	1	2	3	3	3	0	Tropomyosin	like
Laminin_I	PF06008.9	gi|479325538|ref|YP_007865593.1|	-	6.2	6.0	46.1	5.6	6.1	10.0	2.3	1	1	1	2	2	2	0	Laminin	Domain	I
DUF869	PF05911.6	gi|479325538|ref|YP_007865593.1|	-	6.5	4.8	53.6	0.068	11.4	17.1	2.5	1	1	1	2	2	2	0	Plant	protein	of	unknown	function	(DUF869)
GAS	PF13851.1	gi|479325538|ref|YP_007865593.1|	-	9.5	5.3	69.5	1.3	8.1	14.2	3.1	1	1	1	2	2	2	0	Growth-arrest	specific	micro-tubule	binding
Gar1	PF04410.9	gi|479325539|ref|YP_007865594.1|	-	4.8e-06	26.1	0.3	6e-06	25.7	0.2	1.1	1	0	0	1	1	1	1	Gar1/Naf1	RNA	binding	region
PRC	PF05239.11	gi|479325539|ref|YP_007865594.1|	-	0.00031	20.5	0.5	0.00048	19.9	0.0	1.6	2	0	0	2	2	2	1	PRC-barrel	domain
TFIIB	PF00382.14	gi|479325540|ref|YP_007865595.1|	-	4.1e-22	77.7	0.0	1.3e-11	44.0	0.0	2.3	2	0	0	2	2	2	2	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.7	gi|479325540|ref|YP_007865595.1|	-	1.3e-17	62.7	2.4	2.1e-17	62.1	1.7	1.3	1	0	0	1	1	1	1	TFIIB	zinc-binding
Lar_restr_allev	PF14354.1	gi|479325540|ref|YP_007865595.1|	-	0.00097	19.3	0.7	0.0019	18.4	0.5	1.5	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
zf-ribbon_3	PF13248.1	gi|479325540|ref|YP_007865595.1|	-	0.0013	17.9	1.7	0.7	9.1	0.1	2.3	2	0	0	2	2	2	2	zinc-ribbon	domain
Sigma70_r4	PF04545.11	gi|479325540|ref|YP_007865595.1|	-	0.0023	17.2	0.0	0.005	16.1	0.0	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
Prim_Zn_Ribbon	PF08273.7	gi|479325540|ref|YP_007865595.1|	-	0.013	15.5	0.7	0.026	14.6	0.5	1.4	1	0	0	1	1	1	0	Zinc-binding	domain	of	primase-helicase
zinc_ribbon_2	PF13240.1	gi|479325540|ref|YP_007865595.1|	-	0.034	13.6	4.6	0.44	10.1	0.0	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
Sigma70_r4_2	PF08281.7	gi|479325540|ref|YP_007865595.1|	-	0.06	12.8	0.0	0.16	11.4	0.0	1.7	1	0	0	1	1	1	0	Sigma-70,	region	4
Elf1	PF05129.8	gi|479325540|ref|YP_007865595.1|	-	0.074	12.7	0.5	0.18	11.4	0.4	1.7	1	0	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
DUF2387	PF09526.5	gi|479325540|ref|YP_007865595.1|	-	0.078	12.9	0.5	0.17	11.7	0.3	1.6	1	0	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
Ribosomal_S27e	PF01667.12	gi|479325540|ref|YP_007865595.1|	-	0.081	12.4	0.5	0.14	11.7	0.3	1.3	1	0	0	1	1	1	0	Ribosomal	protein	S27
DUF1548	PF07579.6	gi|479325540|ref|YP_007865595.1|	-	0.1	12.7	0.2	0.7	10.0	0.0	2.1	1	1	1	2	2	2	0	Domain	of	Unknown	Function	(DUF1548)
Zn_Tnp_IS1595	PF12760.2	gi|479325540|ref|YP_007865595.1|	-	0.11	12.3	0.2	0.19	11.5	0.2	1.4	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
RRN7	PF11781.3	gi|479325540|ref|YP_007865595.1|	-	0.11	12.0	0.7	0.17	11.4	0.5	1.3	1	0	0	1	1	1	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
OrfB_Zn_ribbon	PF07282.6	gi|479325540|ref|YP_007865595.1|	-	0.13	11.9	0.4	0.24	11.1	0.3	1.4	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
DZR	PF12773.2	gi|479325540|ref|YP_007865595.1|	-	0.15	11.9	0.2	0.28	11.0	0.2	1.4	1	0	0	1	1	1	0	Double	zinc	ribbon
A2L_zn_ribbon	PF08792.5	gi|479325540|ref|YP_007865595.1|	-	0.5	9.8	4.1	9.4	5.8	2.9	2.4	1	1	0	1	1	1	0	A2L	zinc	ribbon	domain
Rubredoxin	PF00301.15	gi|479325540|ref|YP_007865595.1|	-	0.52	10.2	2.1	2.1	8.3	0.2	2.3	2	0	0	2	2	2	0	Rubredoxin
RNA_pol_Rpc34	PF05158.7	gi|479325541|ref|YP_007865596.1|	-	7.5e-12	45.0	3.9	5.7e-07	29.0	1.6	2.0	1	1	1	2	2	2	2	RNA	polymerase	Rpc34	subunit
HTH_24	PF13412.1	gi|479325541|ref|YP_007865596.1|	-	5.8e-06	25.5	1.2	4.6e-05	22.7	0.3	2.3	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
B-block_TFIIIC	PF04182.7	gi|479325541|ref|YP_007865596.1|	-	3.6e-05	23.5	0.2	6.1e-05	22.7	0.1	1.4	1	0	0	1	1	1	1	B-block	binding	subunit	of	TFIIIC
MarR_2	PF12802.2	gi|479325541|ref|YP_007865596.1|	-	0.00027	20.5	0.0	0.0011	18.5	0.0	1.8	2	0	0	2	2	2	1	MarR	family
MarR	PF01047.17	gi|479325541|ref|YP_007865596.1|	-	0.00054	19.6	0.1	0.00097	18.8	0.1	1.4	1	0	0	1	1	1	1	MarR	family
HTH_3	PF01381.17	gi|479325541|ref|YP_007865596.1|	-	0.00094	18.9	0.9	0.0039	16.9	0.2	2.2	3	0	0	3	3	3	1	Helix-turn-helix
TFIIE_alpha	PF02002.12	gi|479325541|ref|YP_007865596.1|	-	0.0051	16.2	0.1	0.0068	15.9	0.1	1.2	1	0	0	1	1	1	1	TFIIE	alpha	subunit
RPA_C	PF08784.6	gi|479325541|ref|YP_007865596.1|	-	0.011	16.1	0.1	0.016	15.5	0.1	1.3	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
TrmB	PF01978.14	gi|479325541|ref|YP_007865596.1|	-	0.014	15.0	0.8	0.019	14.6	0.2	1.5	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
PaRep2b	PF07775.6	gi|479325541|ref|YP_007865596.1|	-	0.015	13.5	0.1	0.017	13.3	0.1	1.0	1	0	0	1	1	1	0	PaRep2b	protein
HTH_Crp_2	PF13545.1	gi|479325541|ref|YP_007865596.1|	-	0.05	13.3	0.0	0.087	12.6	0.0	1.4	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
HTH_36	PF13730.1	gi|479325541|ref|YP_007865596.1|	-	0.057	13.5	0.1	0.16	12.0	0.0	1.8	1	1	0	1	1	1	0	Helix-turn-helix	domain
RepC	PF06504.6	gi|479325541|ref|YP_007865596.1|	-	0.11	11.4	0.0	0.13	11.1	0.0	1.1	1	0	0	1	1	1	0	Replication	protein	C	(RepC)
HTH_27	PF13463.1	gi|479325541|ref|YP_007865596.1|	-	0.11	12.8	0.0	0.18	12.1	0.0	1.4	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
TRM	PF02005.11	gi|479325542|ref|YP_007865597.1|	-	1.6e-94	316.9	0.0	1.8e-94	316.7	0.0	1.0	1	0	0	1	1	1	1	N2,N2-dimethylguanosine	tRNA	methyltransferase
Methyltransf_31	PF13847.1	gi|479325542|ref|YP_007865597.1|	-	0.0024	17.4	0.0	0.006	16.1	0.0	1.7	1	0	0	1	1	1	1	Methyltransferase	domain
ShK	PF01549.19	gi|479325542|ref|YP_007865597.1|	-	1.1	9.7	4.8	2.1	8.7	3.3	1.5	1	0	0	1	1	1	0	ShK	domain-like
zf-ribbon_3	PF13248.1	gi|479325542|ref|YP_007865597.1|	-	4.5	6.6	8.0	14	5.0	5.5	1.8	1	1	0	1	1	1	0	zinc-ribbon	domain
Auto_anti-p27	PF06677.7	gi|479325542|ref|YP_007865597.1|	-	8.8	6.1	6.8	15	5.4	4.7	1.3	1	0	0	1	1	1	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
HTH_3	PF01381.17	gi|479325543|ref|YP_007865598.1|	-	6.1e-12	45.1	0.1	3e-11	42.9	0.0	2.2	3	0	0	3	3	3	1	Helix-turn-helix
HTH_19	PF12844.2	gi|479325543|ref|YP_007865598.1|	-	1.3e-09	37.9	0.6	7.1e-08	32.3	0.0	2.9	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_31	PF13560.1	gi|479325543|ref|YP_007865598.1|	-	4.3e-07	30.0	0.0	9.6e-07	28.9	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
MerR	PF00376.18	gi|479325543|ref|YP_007865598.1|	-	0.00019	20.8	0.0	0.00065	19.1	0.0	2.0	1	0	0	1	1	1	1	MerR	family	regulatory	protein
HTH_23	PF13384.1	gi|479325543|ref|YP_007865598.1|	-	0.00071	19.1	0.0	0.0023	17.5	0.0	1.8	2	0	0	2	2	2	1	Homeodomain-like	domain
HTH_17	PF12728.2	gi|479325543|ref|YP_007865598.1|	-	0.0024	18.0	0.0	0.0076	16.4	0.0	1.9	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_25	PF13413.1	gi|479325543|ref|YP_007865598.1|	-	0.0029	17.2	0.2	0.066	12.8	0.0	2.8	3	0	0	3	3	3	1	Helix-turn-helix	domain
HTH_22	PF13309.1	gi|479325543|ref|YP_007865598.1|	-	0.0037	16.9	0.0	0.021	14.5	0.0	2.3	2	0	0	2	2	2	1	HTH	domain
NUMOD1	PF07453.8	gi|479325543|ref|YP_007865598.1|	-	0.0039	16.9	0.1	0.016	15.0	0.1	2.2	1	0	0	1	1	1	1	NUMOD1	domain
MerR_1	PF13411.1	gi|479325543|ref|YP_007865598.1|	-	0.0075	16.0	0.4	0.12	12.1	0.0	3.0	3	0	0	3	3	3	1	MerR	HTH	family	regulatory	protein
PASTA	PF03793.14	gi|479325543|ref|YP_007865598.1|	-	0.013	15.0	0.4	0.13	11.9	0.1	2.5	2	0	0	2	2	2	0	PASTA	domain
HTH_7	PF02796.10	gi|479325543|ref|YP_007865598.1|	-	0.019	14.7	0.2	0.12	12.2	0.0	2.5	3	0	0	3	3	3	0	Helix-turn-helix	domain	of	resolvase
HTH_6	PF01418.12	gi|479325543|ref|YP_007865598.1|	-	0.03	14.0	0.0	0.18	11.5	0.0	2.3	3	0	0	3	3	3	0	Helix-turn-helix	domain,	rpiR	family
DUF61	PF01886.11	gi|479325544|ref|YP_007865599.1|	-	3.7e-31	107.6	0.5	4.4e-31	107.4	0.4	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF61
Fibrillarin	PF01269.12	gi|479325545|ref|YP_007865600.1|	-	4.8e-98	326.6	0.1	5.5e-98	326.4	0.1	1.0	1	0	0	1	1	1	1	Fibrillarin
DUF1447	PF07288.6	gi|479325545|ref|YP_007865600.1|	-	0.01	15.5	0.0	0.11	12.2	0.0	2.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1447)
PCMT	PF01135.14	gi|479325545|ref|YP_007865600.1|	-	0.072	12.6	0.1	0.16	11.5	0.0	1.5	2	0	0	2	2	2	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Nop	PF01798.13	gi|479325546|ref|YP_007865601.1|	-	1.5e-53	180.1	0.2	2.8e-53	179.2	0.1	1.4	1	0	0	1	1	1	1	Putative	snoRNA	binding	domain
NOSIC	PF08060.8	gi|479325546|ref|YP_007865601.1|	-	2.1e-24	85.0	0.1	4.4e-24	84.0	0.1	1.6	1	0	0	1	1	1	1	NOSIC	(NUC001)	domain
RuvA_C	PF07499.8	gi|479325546|ref|YP_007865601.1|	-	0.0079	16.3	0.1	0.041	14.0	0.0	2.3	2	0	0	2	2	2	1	RuvA,	C-terminal	domain
DUF3215	PF11503.3	gi|479325546|ref|YP_007865601.1|	-	0.034	13.7	0.2	0.14	11.8	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3215)
Ribosomal_S30	PF04758.9	gi|479325547|ref|YP_007865602.1|	-	1.7e-13	50.1	5.5	2e-13	49.8	3.8	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S30
Sas10	PF09368.5	gi|479325547|ref|YP_007865602.1|	-	0.16	12.1	7.4	0.3	11.2	4.9	1.6	1	1	1	2	2	2	0	Sas10	C-terminal	domain
Asparaginase	PF00710.15	gi|479325548|ref|YP_007865603.1|	-	1.1e-88	297.1	0.1	1.3e-88	296.8	0.0	1.0	1	0	0	1	1	1	1	Asparaginase
GatB_N	PF02934.10	gi|479325549|ref|YP_007865604.1|	-	6.7e-81	271.3	0.0	1e-80	270.7	0.0	1.2	1	0	0	1	1	1	1	GatB/GatE	catalytic	domain
GatB_Yqey	PF02637.13	gi|479325549|ref|YP_007865604.1|	-	1.2e-25	90.0	6.8	1.2e-25	90.0	4.7	2.5	3	0	0	3	3	3	1	GatB	domain
GAD	PF02938.9	gi|479325549|ref|YP_007865604.1|	-	5e-10	39.4	1.2	1.7e-08	34.4	0.0	3.3	2	1	0	3	3	3	1	GAD	domain
YqeY	PF09424.5	gi|479325549|ref|YP_007865604.1|	-	2.2e-05	24.3	2.3	5.2e-05	23.1	1.6	1.7	1	0	0	1	1	1	1	Yqey-like	protein
PrcB_C	PF14343.1	gi|479325550|ref|YP_007865605.1|	-	0.13	11.9	0.0	0.32	10.7	0.0	1.6	1	0	0	1	1	1	0	PrcB	C-terminal
HTH_37	PF13744.1	gi|479325551|ref|YP_007865606.1|	-	0.00011	21.8	0.1	0.00017	21.2	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_3	PF01381.17	gi|479325551|ref|YP_007865606.1|	-	0.0085	15.9	0.2	0.015	15.0	0.1	1.4	1	0	0	1	1	1	1	Helix-turn-helix
Ribonuc_red_lgC	PF02867.10	gi|479325552|ref|YP_007865607.1|	-	6.5e-169	562.9	0.0	8.3e-169	562.5	0.0	1.1	1	0	0	1	1	1	1	Ribonucleotide	reductase,	barrel	domain
Ribonuc_red_lgN	PF00317.16	gi|479325552|ref|YP_007865607.1|	-	2.7e-28	97.5	0.2	6.4e-28	96.3	0.1	1.7	1	0	0	1	1	1	1	Ribonucleotide	reductase,	all-alpha	domain
ATP-cone	PF03477.11	gi|479325552|ref|YP_007865607.1|	-	2.5e-11	43.8	2.7	5.7e-11	42.7	0.6	2.6	2	0	0	2	2	2	1	ATP	cone	domain
DBINO	PF13892.1	gi|479325552|ref|YP_007865607.1|	-	0.63	10.0	6.0	1.1	9.3	0.1	2.4	2	0	0	2	2	2	0	DNA-binding	domain
UPF0051	PF01458.12	gi|479325553|ref|YP_007865608.1|	-	1.1e-48	165.6	0.9	1.5e-48	165.2	0.6	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
UPF0051	PF01458.12	gi|479325554|ref|YP_007865609.1|	-	1.4e-60	204.6	0.0	1.7e-60	204.3	0.0	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
ABC_tran	PF00005.22	gi|479325555|ref|YP_007865610.1|	-	1.3e-23	83.7	0.1	1.8e-23	83.3	0.1	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|479325555|ref|YP_007865610.1|	-	4.5e-11	43.2	0.1	8.8e-10	39.0	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|479325555|ref|YP_007865610.1|	-	3e-05	23.3	0.2	0.00045	19.5	0.2	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_25	PF13481.1	gi|479325555|ref|YP_007865610.1|	-	0.0063	15.9	0.0	0.013	14.8	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|479325555|ref|YP_007865610.1|	-	0.016	14.7	0.1	0.038	13.5	0.1	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
DUF258	PF03193.11	gi|479325555|ref|YP_007865610.1|	-	0.025	13.7	0.0	0.04	13.1	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_23	PF13476.1	gi|479325555|ref|YP_007865610.1|	-	0.044	14.1	0.1	0.05	13.9	0.1	1.4	1	1	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|479325555|ref|YP_007865610.1|	-	0.11	12.6	0.3	0.37	10.9	0.2	2.0	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_13	PF13166.1	gi|479325555|ref|YP_007865610.1|	-	0.14	10.6	0.3	0.42	9.0	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
Antitoxin-MazE	PF04014.13	gi|479325556|ref|YP_007865611.1|	-	7.5e-09	35.1	0.1	2.3e-08	33.5	0.1	1.8	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
DED	PF01335.16	gi|479325556|ref|YP_007865611.1|	-	0.011	15.8	1.1	1.2	9.3	0.5	2.7	2	0	0	2	2	2	0	Death	effector	domain
Prefoldin_3	PF13758.1	gi|479325556|ref|YP_007865611.1|	-	0.044	13.5	0.4	0.13	12.0	0.3	1.8	1	0	0	1	1	1	0	Prefoldin	subunit
HSP20	PF00011.16	gi|479325557|ref|YP_007865612.1|	-	0.0083	15.9	0.3	0.1	12.4	0.2	2.3	1	1	0	1	1	1	1	Hsp20/alpha	crystallin	family
CS	PF04969.11	gi|479325557|ref|YP_007865612.1|	-	0.016	15.7	1.9	0.026	15.0	1.3	1.4	1	0	0	1	1	1	0	CS	domain
Aldo_ket_red	PF00248.16	gi|479325557|ref|YP_007865612.1|	-	0.023	13.5	0.2	0.049	12.4	0.0	1.5	2	0	0	2	2	2	0	Aldo/keto	reductase	family
Val_tRNA-synt_C	PF10458.4	gi|479325557|ref|YP_007865612.1|	-	0.029	14.4	0.3	0.05	13.6	0.2	1.3	1	0	0	1	1	1	0	Valyl	tRNA	synthetase	tRNA	binding	arm
DBB	PF14545.1	gi|479325557|ref|YP_007865612.1|	-	0.051	13.0	0.3	0.081	12.4	0.2	1.4	1	0	0	1	1	1	0	Dof,	BCAP,	and	BANK	(DBB)	motif,
PAC2	PF09754.4	gi|479325558|ref|YP_007865613.1|	-	2.8e-37	128.7	0.1	3.4e-37	128.4	0.1	1.0	1	0	0	1	1	1	1	PAC2	family
GCV_H	PF01597.14	gi|479325559|ref|YP_007865614.1|	-	6.5e-44	148.5	1.3	7.3e-44	148.3	0.9	1.0	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
Biotin_lipoyl	PF00364.17	gi|479325559|ref|YP_007865614.1|	-	0.0014	18.2	0.4	0.0029	17.2	0.3	1.5	1	0	0	1	1	1	1	Biotin-requiring	enzyme
RnfC_N	PF13375.1	gi|479325559|ref|YP_007865614.1|	-	0.032	13.9	0.3	0.066	12.9	0.1	1.5	1	1	0	1	1	1	0	RnfC	Barrel	sandwich	hybrid	domain
GCV_T	PF01571.16	gi|479325560|ref|YP_007865615.1|	-	7.5e-43	146.3	0.0	9.3e-43	146.0	0.0	1.1	1	0	0	1	1	1	1	Aminomethyltransferase	folate-binding	domain
GCV_T_C	PF08669.6	gi|479325560|ref|YP_007865615.1|	-	2.4e-18	65.9	0.0	3.9e-18	65.2	0.0	1.3	1	0	0	1	1	1	1	Glycine	cleavage	T-protein	C-terminal	barrel	domain
GDC-P	PF02347.11	gi|479325561|ref|YP_007865616.1|	-	2.5e-123	411.9	0.0	3e-123	411.6	0.0	1.0	1	0	0	1	1	1	1	Glycine	cleavage	system	P-protein
GDC-P	PF02347.11	gi|479325562|ref|YP_007865617.1|	-	7.9e-14	51.1	0.0	2.7e-12	46.1	0.0	2.1	2	0	0	2	2	2	2	Glycine	cleavage	system	P-protein
Aminotran_5	PF00266.14	gi|479325562|ref|YP_007865617.1|	-	3.5e-08	32.5	0.2	1.3e-07	30.6	0.2	1.8	1	1	0	1	1	1	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.16	gi|479325562|ref|YP_007865617.1|	-	0.0063	15.6	0.1	0.011	14.9	0.1	1.3	1	0	0	1	1	1	1	Beta-eliminating	lyase
DUF126	PF01989.11	gi|479325562|ref|YP_007865617.1|	-	0.1	12.3	0.0	1.8	8.3	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF126
Peptidase_S24	PF00717.18	gi|479325563|ref|YP_007865618.1|	-	0.00037	20.0	0.2	0.00059	19.4	0.2	1.4	1	0	0	1	1	1	1	Peptidase	S24-like
DUF2649	PF10854.3	gi|479325563|ref|YP_007865618.1|	-	0.38	10.9	2.5	1	9.4	1.3	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2649)
TF_Zn_Ribbon	PF08271.7	gi|479325564|ref|YP_007865619.1|	-	6.6e-06	25.3	0.6	0.11	11.8	0.1	2.4	2	0	0	2	2	2	2	TFIIB	zinc-binding
UPF0547	PF10571.4	gi|479325564|ref|YP_007865619.1|	-	7.9e-06	25.4	3.9	0.038	13.6	0.3	2.2	2	0	0	2	2	2	2	Uncharacterised	protein	family	UPF0547
FYDLN_acid	PF09538.5	gi|479325564|ref|YP_007865619.1|	-	1.4e-05	25.5	2.9	0.021	15.3	0.3	2.1	2	0	0	2	2	2	2	Protein	of	unknown	function	(FYDLN_acid)
zf-ribbon_3	PF13248.1	gi|479325564|ref|YP_007865619.1|	-	1.8e-05	23.7	4.5	0.014	14.6	0.3	2.3	2	0	0	2	2	2	2	zinc-ribbon	domain
DUF1610	PF07754.6	gi|479325564|ref|YP_007865619.1|	-	4.5e-05	23.4	8.9	0.033	14.3	0.9	2.5	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF1610)
zinc_ribbon_2	PF13240.1	gi|479325564|ref|YP_007865619.1|	-	5.3e-05	22.5	4.1	0.00045	19.6	2.8	2.2	1	1	0	1	1	1	1	zinc-ribbon	domain
zf-NADH-PPase	PF09297.6	gi|479325564|ref|YP_007865619.1|	-	5.5e-05	22.5	0.6	0.062	12.8	0.0	2.2	2	0	0	2	2	2	2	NADH	pyrophosphatase	zinc	ribbon	domain
Zn_Tnp_IS1595	PF12760.2	gi|479325564|ref|YP_007865619.1|	-	7.7e-05	22.4	0.6	0.14	12.0	0.0	2.3	2	0	0	2	2	2	2	Transposase	zinc-ribbon	domain
zf-ISL3	PF14690.1	gi|479325564|ref|YP_007865619.1|	-	0.00019	21.3	0.5	0.21	11.6	0.0	2.3	2	0	0	2	2	2	2	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
PhnA_Zn_Ribbon	PF08274.7	gi|479325564|ref|YP_007865619.1|	-	0.00025	20.7	1.8	0.033	13.9	0.1	2.2	2	0	0	2	2	2	1	PhnA	Zinc-Ribbon
Zn-ribbon_8	PF09723.5	gi|479325564|ref|YP_007865619.1|	-	0.00093	19.0	1.5	0.29	11.1	0.2	2.4	2	0	0	2	2	2	1	Zinc	ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|479325564|ref|YP_007865619.1|	-	0.0018	17.9	0.3	1.7	8.3	0.0	2.4	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
zf-IS66	PF13005.2	gi|479325564|ref|YP_007865619.1|	-	0.0022	17.8	1.3	0.025	14.5	1.6	2.1	1	1	1	2	2	2	1	zinc-finger	binding	domain	of	transposase	IS66
CpXC	PF14353.1	gi|479325564|ref|YP_007865619.1|	-	0.0024	17.8	0.6	0.004	17.1	0.1	1.6	2	1	0	2	2	1	1	CpXC	protein
DZR	PF12773.2	gi|479325564|ref|YP_007865619.1|	-	0.0033	17.1	2.5	0.034	13.9	1.6	2.1	1	1	0	1	1	1	1	Double	zinc	ribbon
zf-3CxxC	PF13695.1	gi|479325564|ref|YP_007865619.1|	-	0.0035	17.5	0.6	0.0035	17.5	0.4	2.1	2	1	1	3	3	2	1	Zinc-binding	domain
DUF2296	PF10058.4	gi|479325564|ref|YP_007865619.1|	-	0.0035	17.0	1.5	2	8.1	0.1	2.2	2	0	0	2	2	2	2	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
Cren7	PF11520.3	gi|479325564|ref|YP_007865619.1|	-	0.0042	16.6	1.0	0.018	14.6	0.1	2.2	2	1	0	2	2	2	1	Chromatin	protein	Cren7
zf-ZPR1	PF03367.8	gi|479325564|ref|YP_007865619.1|	-	0.0043	16.2	0.5	0.0067	15.6	0.4	1.5	1	1	0	1	1	1	1	ZPR1	zinc-finger	domain
Rubredoxin	PF00301.15	gi|479325564|ref|YP_007865619.1|	-	0.0046	16.7	2.4	1.3	8.9	0.1	2.4	2	0	0	2	2	2	1	Rubredoxin
zf-nanos	PF05741.8	gi|479325564|ref|YP_007865619.1|	-	0.0062	16.4	1.2	1.7	8.6	0.0	2.2	1	1	0	2	2	2	1	Nanos	RNA	binding	domain
TFIIS_C	PF01096.13	gi|479325564|ref|YP_007865619.1|	-	0.0071	15.9	3.3	0.13	11.9	0.2	2.4	2	0	0	2	2	2	1	Transcription	factor	S-II	(TFIIS)
DUF4428	PF14471.1	gi|479325564|ref|YP_007865619.1|	-	0.0073	16.0	2.3	1.7	8.4	0.0	2.6	2	1	0	2	2	2	1	Domain	of	unknown	function	(DUF4428)
zinc_ribbon_5	PF13719.1	gi|479325564|ref|YP_007865619.1|	-	0.0078	15.7	5.2	0.51	9.9	0.4	2.7	2	1	0	2	2	2	1	zinc-ribbon	domain
Nudix_N_2	PF14803.1	gi|479325564|ref|YP_007865619.1|	-	0.0079	15.8	1.3	2.1	8.1	0.1	2.4	2	0	0	2	2	2	1	Nudix	N-terminal
zf-FPG_IleRS	PF06827.9	gi|479325564|ref|YP_007865619.1|	-	0.012	15.2	1.4	3.8	7.2	0.1	2.5	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
zf-Mss51	PF13824.1	gi|479325564|ref|YP_007865619.1|	-	0.016	15.0	0.3	2.3	8.1	0.0	2.3	2	0	0	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
DNA_RNApol_7kD	PF03604.8	gi|479325564|ref|YP_007865619.1|	-	0.021	14.2	1.3	2.3	7.7	0.2	2.5	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Sgf11	PF08209.6	gi|479325564|ref|YP_007865619.1|	-	0.025	13.9	3.0	2.9	7.2	0.1	2.2	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
A2L_zn_ribbon	PF08792.5	gi|479325564|ref|YP_007865619.1|	-	0.026	13.9	0.9	2.3	7.7	0.1	2.4	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
Ogr_Delta	PF04606.7	gi|479325564|ref|YP_007865619.1|	-	0.027	14.1	1.5	4.4	7.0	0.1	2.3	2	0	0	2	2	2	0	Ogr/Delta-like	zinc	finger
HypA	PF01155.14	gi|479325564|ref|YP_007865619.1|	-	0.028	14.1	0.0	0.056	13.1	0.0	1.6	1	1	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
Gin	PF10764.4	gi|479325564|ref|YP_007865619.1|	-	0.029	14.0	0.7	0.74	9.5	0.0	2.5	3	0	0	3	3	2	0	Inhibitor	of	sigma-G	Gin
DUF4379	PF14311.1	gi|479325564|ref|YP_007865619.1|	-	0.029	14.1	1.5	0.08	12.7	0.1	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4379)
zinc_ribbon_4	PF13717.1	gi|479325564|ref|YP_007865619.1|	-	0.037	13.7	6.9	0.62	9.7	0.6	2.8	3	0	0	3	3	2	0	zinc-ribbon	domain
IBR	PF01485.16	gi|479325564|ref|YP_007865619.1|	-	0.043	13.7	0.3	0.067	13.0	0.2	1.4	1	0	0	1	1	1	0	IBR	domain
Acetone_carb_G	PF08882.6	gi|479325564|ref|YP_007865619.1|	-	0.044	13.8	0.7	2.6	8.1	0.0	2.5	2	1	1	3	3	3	0	Acetone	carboxylase	gamma	subunit
DNA_ligase_ZBD	PF03119.11	gi|479325564|ref|YP_007865619.1|	-	0.05	13.3	6.8	0.19	11.4	0.2	2.4	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-HIT	PF04438.11	gi|479325564|ref|YP_007865619.1|	-	0.052	13.1	1.7	0.85	9.3	0.2	2.1	2	0	0	2	2	2	0	HIT	zinc	finger
zf-RING_3	PF14369.1	gi|479325564|ref|YP_007865619.1|	-	0.055	13.4	0.7	12	5.9	0.1	2.3	2	0	0	2	2	2	0	zinc-finger
zf-H2C2_2	PF13465.1	gi|479325564|ref|YP_007865619.1|	-	0.071	13.4	4.2	2.6	8.5	0.9	2.3	2	0	0	2	2	2	0	Zinc-finger	double	domain
Cys_rich_CPXG	PF14255.1	gi|479325564|ref|YP_007865619.1|	-	0.077	12.8	2.7	3.3	7.6	0.0	2.8	3	0	0	3	3	3	0	Cysteine-rich	CPXCG
GFA	PF04828.9	gi|479325564|ref|YP_007865619.1|	-	0.083	12.8	1.9	1.2	9.1	0.1	2.4	1	1	1	2	2	2	0	Glutathione-dependent	formaldehyde-activating	enzyme
Elf1	PF05129.8	gi|479325564|ref|YP_007865619.1|	-	0.091	12.4	2.3	0.63	9.7	0.1	2.3	1	1	1	2	2	2	0	Transcription	elongation	factor	Elf1	like
Trm112p	PF03966.11	gi|479325564|ref|YP_007865619.1|	-	0.099	13.0	0.4	0.39	11.1	0.3	2.0	1	1	0	1	1	1	0	Trm112p-like	protein
DUF1272	PF06906.6	gi|479325564|ref|YP_007865619.1|	-	0.11	12.4	0.6	13	5.7	0.1	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1272)
zf-TFIIB	PF13453.1	gi|479325564|ref|YP_007865619.1|	-	0.12	11.6	0.1	10	5.4	0.0	2.3	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
DUF555	PF04475.7	gi|479325564|ref|YP_007865619.1|	-	0.12	12.4	0.1	1.5	8.8	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF555)
zf-Di19	PF05605.7	gi|479325564|ref|YP_007865619.1|	-	0.12	12.5	0.4	14	5.8	0.0	2.2	2	0	0	2	2	2	0	Drought	induced	19	protein	(Di19),	zinc-binding
TerY-C	PF15616.1	gi|479325564|ref|YP_007865619.1|	-	0.13	12.2	1.7	7.4	6.5	0.1	2.3	2	1	0	2	2	2	0	TerY-C	metal	binding	domain
zf-C2H2	PF00096.21	gi|479325564|ref|YP_007865619.1|	-	0.14	12.5	2.3	9	6.8	0.1	2.2	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
ADK_lid	PF05191.9	gi|479325564|ref|YP_007865619.1|	-	0.15	11.7	2.0	11	5.7	0.1	2.3	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
Prim_Zn_Ribbon	PF08273.7	gi|479325564|ref|YP_007865619.1|	-	0.64	10.1	3.2	19	5.4	0.0	2.2	2	0	0	2	2	2	0	Zinc-binding	domain	of	primase-helicase
DUF329	PF03884.9	gi|479325564|ref|YP_007865619.1|	-	1	8.9	5.5	3.6	7.2	0.2	2.7	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF329)
DUF35_N	PF12172.3	gi|479325564|ref|YP_007865619.1|	-	1.4	8.8	3.5	10	6.1	0.1	2.2	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF4118	PF13493.1	gi|479325565|ref|YP_007865620.1|	-	0.65	10.2	8.8	0.9	9.7	6.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4118)
Enolase_C	PF00113.17	gi|479325566|ref|YP_007865621.1|	-	1.4e-93	313.1	0.0	2.1e-93	312.5	0.0	1.2	1	0	0	1	1	1	1	Enolase,	C-terminal	TIM	barrel	domain
Enolase_N	PF03952.11	gi|479325566|ref|YP_007865621.1|	-	6.5e-40	136.1	0.4	9.3e-40	135.6	0.3	1.2	1	0	0	1	1	1	1	Enolase,	N-terminal	domain
Colicin_im	PF03857.8	gi|479325567|ref|YP_007865622.1|	-	0.12	12.1	2.5	0.14	11.9	1.7	1.2	1	0	0	1	1	1	0	Colicin	immunity	protein
Cytochrom_C_asm	PF01578.15	gi|479325567|ref|YP_007865622.1|	-	0.2	11.1	3.0	0.27	10.7	2.1	1.4	1	1	0	1	1	1	0	Cytochrome	C	assembly	protein
DUF4131	PF13567.1	gi|479325567|ref|YP_007865622.1|	-	0.29	10.5	5.0	0.33	10.3	3.5	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
zf-DHHC	PF01529.15	gi|479325567|ref|YP_007865622.1|	-	0.42	9.9	2.2	0.52	9.6	1.6	1.1	1	0	0	1	1	1	0	DHHC	palmitoyltransferase
MARVEL	PF01284.18	gi|479325567|ref|YP_007865622.1|	-	0.68	9.7	5.3	0.8	9.5	3.7	1.1	1	0	0	1	1	1	0	Membrane-associating	domain
VPEP	PF07589.6	gi|479325567|ref|YP_007865622.1|	-	0.79	9.7	5.5	2.1	8.3	0.2	2.5	2	0	0	2	2	2	0	PEP-CTERM	motif
HIG_1_N	PF04588.8	gi|479325567|ref|YP_007865622.1|	-	1.9	8.3	7.4	8	6.2	0.3	2.2	2	0	0	2	2	2	0	Hypoxia	induced	protein	conserved	region
DUF4282	PF14110.1	gi|479325567|ref|YP_007865622.1|	-	2.5	8.3	7.8	3.6	7.8	5.4	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4282)
DUF872	PF05915.7	gi|479325567|ref|YP_007865622.1|	-	3.1	7.6	6.0	2.8	7.8	3.6	1.4	1	1	0	1	1	1	0	Eukaryotic	protein	of	unknown	function	(DUF872)
DUF3955	PF13127.1	gi|479325567|ref|YP_007865622.1|	-	3.3	7.3	11.2	1	8.9	1.9	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3955)
SHOCT	PF09851.4	gi|479325568|ref|YP_007865623.1|	-	0.031	13.7	1.2	0.1	12.0	0.8	1.9	1	0	0	1	1	1	0	Short	C-terminal	domain
DUF342	PF03961.8	gi|479325568|ref|YP_007865623.1|	-	0.089	11.1	2.0	0.12	10.7	1.4	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
Syntaxin-6_N	PF09177.6	gi|479325568|ref|YP_007865623.1|	-	0.091	13.1	2.8	1	9.7	0.3	2.4	2	0	0	2	2	2	0	Syntaxin	6,	N-terminal
Exonuc_VII_L	PF02601.10	gi|479325568|ref|YP_007865623.1|	-	0.098	11.8	4.6	0.13	11.4	3.2	1.1	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
DUF724	PF05266.9	gi|479325568|ref|YP_007865623.1|	-	0.098	12.2	4.7	0.17	11.5	3.3	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF724)
BLOC1_2	PF10046.4	gi|479325568|ref|YP_007865623.1|	-	0.16	12.1	6.4	0.08	13.0	2.0	2.2	2	0	0	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
SPX	PF03105.14	gi|479325568|ref|YP_007865623.1|	-	0.17	11.6	8.9	0.3	10.8	6.2	1.5	1	1	0	1	1	1	0	SPX	domain
Peptidase_S10	PF00450.17	gi|479325568|ref|YP_007865623.1|	-	0.18	10.9	0.3	0.23	10.6	0.2	1.1	1	0	0	1	1	1	0	Serine	carboxypeptidase
Laminin_I	PF06008.9	gi|479325568|ref|YP_007865623.1|	-	0.23	10.7	6.3	0.31	10.3	4.4	1.3	1	1	0	1	1	1	0	Laminin	Domain	I
Syntaxin	PF00804.20	gi|479325568|ref|YP_007865623.1|	-	0.24	11.6	10.9	2.4	8.3	7.5	2.4	1	1	0	1	1	1	0	Syntaxin
THOC7	PF05615.8	gi|479325568|ref|YP_007865623.1|	-	0.32	11.2	6.1	0.65	10.2	2.3	2.2	1	1	1	2	2	2	0	Tho	complex	subunit	7
DUF904	PF06005.7	gi|479325568|ref|YP_007865623.1|	-	4.3	7.7	10.2	1	9.7	4.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF904)
Snf7	PF03357.16	gi|479325569|ref|YP_007865624.1|	-	7.9e-06	25.3	2.1	1.4e-05	24.5	1.5	1.5	1	1	0	1	1	1	1	Snf7
Baculo_PEP_C	PF04513.7	gi|479325569|ref|YP_007865624.1|	-	0.0023	17.7	0.6	0.43	10.3	0.3	2.3	1	1	1	2	2	2	2	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
HTH_36	PF13730.1	gi|479325569|ref|YP_007865624.1|	-	0.035	14.2	0.0	0.066	13.3	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
MarR_2	PF12802.2	gi|479325569|ref|YP_007865624.1|	-	0.048	13.3	0.0	0.11	12.2	0.0	1.6	1	0	0	1	1	1	0	MarR	family
TMP_2	PF06791.8	gi|479325569|ref|YP_007865624.1|	-	0.064	12.8	0.3	0.13	11.8	0.1	1.6	1	1	0	1	1	1	0	Prophage	tail	length	tape	measure	protein
TrmB	PF01978.14	gi|479325569|ref|YP_007865624.1|	-	0.14	11.8	0.9	1	9.1	0.1	2.5	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
AAA	PF00004.24	gi|479325570|ref|YP_007865625.1|	-	1.5e-39	135.2	0.0	8e-39	132.8	0.0	2.0	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
MIT	PF04212.13	gi|479325570|ref|YP_007865625.1|	-	2.3e-15	56.2	3.5	2.3e-15	56.2	2.5	1.9	2	0	0	2	2	1	1	MIT	(microtubule	interacting	and	transport)	domain
AAA_14	PF13173.1	gi|479325570|ref|YP_007865625.1|	-	4.2e-09	36.3	0.0	1.5e-08	34.5	0.0	2.0	2	1	0	2	2	1	1	AAA	domain
AAA_2	PF07724.9	gi|479325570|ref|YP_007865625.1|	-	3.7e-07	30.1	0.0	1e-06	28.7	0.0	1.7	2	0	0	2	2	1	1	AAA	domain	(Cdc48	subfamily)
Vps4_C	PF09336.5	gi|479325570|ref|YP_007865625.1|	-	2e-06	27.5	0.3	2.1e-05	24.3	0.0	2.3	2	0	0	2	2	2	1	Vps4	C	terminal	oligomerisation	domain
AAA_22	PF13401.1	gi|479325570|ref|YP_007865625.1|	-	2e-06	27.9	0.0	9.9e-06	25.7	0.0	2.1	1	1	0	1	1	1	1	AAA	domain
RuvB_N	PF05496.7	gi|479325570|ref|YP_007865625.1|	-	3.7e-06	26.1	0.0	1.5e-05	24.2	0.0	2.0	1	1	1	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_16	PF13191.1	gi|479325570|ref|YP_007865625.1|	-	8.3e-06	25.9	0.0	0.0022	18.0	0.0	2.8	2	1	1	3	3	2	1	AAA	ATPase	domain
AAA_5	PF07728.9	gi|479325570|ref|YP_007865625.1|	-	1.6e-05	24.6	0.7	0.00035	20.3	0.0	3.1	3	1	0	3	3	1	1	AAA	domain	(dynein-related	subfamily)
AAA_17	PF13207.1	gi|479325570|ref|YP_007865625.1|	-	1.9e-05	25.4	0.1	7.5e-05	23.5	0.0	2.1	2	1	0	2	2	1	1	AAA	domain
AAA_25	PF13481.1	gi|479325570|ref|YP_007865625.1|	-	3.8e-05	23.1	0.1	0.023	14.1	0.0	2.5	1	1	0	2	2	2	1	AAA	domain
AAA_24	PF13479.1	gi|479325570|ref|YP_007865625.1|	-	5.1e-05	22.9	0.1	0.0003	20.4	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
TPR_11	PF13414.1	gi|479325570|ref|YP_007865625.1|	-	6.6e-05	22.4	0.3	0.00018	21.1	0.2	1.7	1	1	0	1	1	1	1	TPR	repeat
Arch_ATPase	PF01637.13	gi|479325570|ref|YP_007865625.1|	-	0.00015	21.5	2.7	0.24	11.0	0.2	2.9	2	1	1	3	3	3	2	Archaeal	ATPase
TIP49	PF06068.8	gi|479325570|ref|YP_007865625.1|	-	0.00058	18.6	0.1	0.0013	17.4	0.0	1.5	1	1	0	1	1	1	1	TIP49	C-terminus
Mg_chelatase	PF01078.16	gi|479325570|ref|YP_007865625.1|	-	0.0017	17.5	0.0	0.0038	16.4	0.0	1.6	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
Zeta_toxin	PF06414.7	gi|479325570|ref|YP_007865625.1|	-	0.0017	17.4	0.0	0.0034	16.4	0.0	1.5	1	0	0	1	1	1	1	Zeta	toxin
TPR_1	PF00515.23	gi|479325570|ref|YP_007865625.1|	-	0.0019	17.7	0.3	0.005	16.3	0.2	1.8	1	0	0	1	1	1	1	Tetratricopeptide	repeat
ATP-synt_ab	PF00006.20	gi|479325570|ref|YP_007865625.1|	-	0.0047	16.4	0.0	0.0088	15.5	0.0	1.4	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
RNA_helicase	PF00910.17	gi|479325570|ref|YP_007865625.1|	-	0.0058	16.7	0.0	0.018	15.1	0.0	1.9	1	0	0	1	1	1	1	RNA	helicase
AAA_28	PF13521.1	gi|479325570|ref|YP_007865625.1|	-	0.0064	16.4	0.0	0.024	14.6	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.12	gi|479325570|ref|YP_007865625.1|	-	0.011	15.1	0.0	0.021	14.2	0.0	1.4	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
KAP_NTPase	PF07693.9	gi|479325570|ref|YP_007865625.1|	-	0.012	14.6	0.2	0.14	11.0	0.0	2.2	2	1	1	3	3	3	0	KAP	family	P-loop	domain
AAA_18	PF13238.1	gi|479325570|ref|YP_007865625.1|	-	0.013	15.8	0.0	0.036	14.3	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
Bac_DnaA	PF00308.13	gi|479325570|ref|YP_007865625.1|	-	0.014	15.0	0.0	0.028	14.0	0.0	1.5	1	0	0	1	1	1	0	Bacterial	dnaA	protein
AAA_19	PF13245.1	gi|479325570|ref|YP_007865625.1|	-	0.016	14.9	0.0	0.039	13.7	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_33	PF13671.1	gi|479325570|ref|YP_007865625.1|	-	0.017	14.9	0.0	0.031	14.1	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Viral_helicase1	PF01443.13	gi|479325570|ref|YP_007865625.1|	-	0.018	14.5	0.0	0.033	13.7	0.0	1.4	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
NACHT	PF05729.7	gi|479325570|ref|YP_007865625.1|	-	0.019	14.6	0.0	0.065	12.8	0.0	1.8	1	1	1	2	2	2	0	NACHT	domain
TPR_7	PF13176.1	gi|479325570|ref|YP_007865625.1|	-	0.021	14.5	0.1	0.75	9.7	0.0	2.8	2	0	0	2	2	2	0	Tetratricopeptide	repeat
ResIII	PF04851.10	gi|479325570|ref|YP_007865625.1|	-	0.022	14.5	0.0	0.072	12.9	0.0	1.8	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
NB-ARC	PF00931.17	gi|479325570|ref|YP_007865625.1|	-	0.026	13.3	0.0	0.051	12.4	0.0	1.5	1	0	0	1	1	1	0	NB-ARC	domain
ABC_tran	PF00005.22	gi|479325570|ref|YP_007865625.1|	-	0.029	14.6	0.0	0.22	11.8	0.0	2.1	2	0	0	2	2	2	0	ABC	transporter
AAA_10	PF12846.2	gi|479325570|ref|YP_007865625.1|	-	0.029	13.7	0.0	5.1	6.4	0.0	2.8	3	0	0	3	3	3	0	AAA-like	domain
DUF815	PF05673.8	gi|479325570|ref|YP_007865625.1|	-	0.032	13.1	0.0	0.076	11.9	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
Sigma54_activ_2	PF14532.1	gi|479325570|ref|YP_007865625.1|	-	0.039	13.9	0.0	0.73	9.8	0.0	2.2	2	0	0	2	2	2	0	Sigma-54	interaction	domain
TPR_2	PF07719.12	gi|479325570|ref|YP_007865625.1|	-	0.044	13.7	1.2	0.1	12.5	0.2	2.2	2	0	0	2	2	1	0	Tetratricopeptide	repeat
SKI	PF01202.17	gi|479325570|ref|YP_007865625.1|	-	0.056	13.3	0.0	0.13	12.1	0.0	1.6	1	0	0	1	1	1	0	Shikimate	kinase
Parvo_NS1	PF01057.12	gi|479325570|ref|YP_007865625.1|	-	0.063	12.1	0.0	0.12	11.2	0.0	1.3	1	0	0	1	1	1	0	Parvovirus	non-structural	protein	NS1
Sigma54_activat	PF00158.21	gi|479325570|ref|YP_007865625.1|	-	0.098	12.1	0.0	0.51	9.7	0.0	2.0	2	0	0	2	2	2	0	Sigma-54	interaction	domain
TPR_6	PF13174.1	gi|479325570|ref|YP_007865625.1|	-	0.1	13.0	1.0	9.5	6.9	0.0	3.6	3	1	0	3	3	3	0	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|479325570|ref|YP_007865625.1|	-	0.13	12.0	2.6	3.8	7.5	0.1	2.8	2	0	0	2	2	2	0	Tetratricopeptide	repeat
DnaB_2	PF07261.6	gi|479325570|ref|YP_007865625.1|	-	0.25	10.9	2.7	1.2	8.7	0.5	2.9	3	0	0	3	3	2	0	Replication	initiation	and	membrane	attachment
Topoisom_bac	PF01131.15	gi|479325571|ref|YP_007865626.1|	-	7.5e-97	324.6	0.0	9.5e-97	324.3	0.0	1.1	1	0	0	1	1	1	1	DNA	topoisomerase
Toprim	PF01751.17	gi|479325571|ref|YP_007865626.1|	-	3.4e-11	43.0	0.1	1.3e-10	41.1	0.0	2.1	2	0	0	2	2	2	1	Toprim	domain
RNA_pol_Rpb6	PF01192.17	gi|479325572|ref|YP_007865627.1|	-	2.3e-17	62.4	0.1	2.9e-17	62.1	0.1	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb6
Aminotran_5	PF00266.14	gi|479325573|ref|YP_007865628.1|	-	4.4e-28	98.0	0.0	5.7e-28	97.7	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.15	gi|479325573|ref|YP_007865628.1|	-	3.1e-05	22.4	0.0	4.5e-05	21.8	0.0	1.2	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Aminotran_1_2	PF00155.16	gi|479325573|ref|YP_007865628.1|	-	0.00027	20.0	0.0	0.00042	19.3	0.0	1.4	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Beta_elim_lyase	PF01212.16	gi|479325573|ref|YP_007865628.1|	-	0.00066	18.8	0.0	0.0015	17.7	0.0	1.5	1	0	0	1	1	1	1	Beta-eliminating	lyase
2-Hacid_dh_C	PF02826.14	gi|479325574|ref|YP_007865629.1|	-	4.1e-46	156.3	0.3	7.7e-46	155.4	0.2	1.5	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.25	gi|479325574|ref|YP_007865629.1|	-	1.7e-31	108.4	1.3	2.1e-31	108.1	0.9	1.0	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
NAD_binding_2	PF03446.10	gi|479325574|ref|YP_007865629.1|	-	3.9e-10	39.8	0.5	8.4e-10	38.7	0.3	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
AdoHcyase_NAD	PF00670.16	gi|479325574|ref|YP_007865629.1|	-	9.4e-07	28.8	0.7	9.4e-07	28.8	0.5	1.6	2	0	0	2	2	2	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
IlvN	PF07991.7	gi|479325574|ref|YP_007865629.1|	-	0.0027	17.1	0.3	0.0051	16.2	0.2	1.5	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
F420_oxidored	PF03807.12	gi|479325574|ref|YP_007865629.1|	-	0.0029	18.0	0.6	0.0079	16.6	0.1	2.0	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
3HCDH_N	PF02737.13	gi|479325574|ref|YP_007865629.1|	-	0.0031	17.2	0.1	0.006	16.2	0.1	1.6	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
CoA_binding	PF02629.14	gi|479325574|ref|YP_007865629.1|	-	0.005	17.3	0.6	0.016	15.6	0.4	1.9	1	0	0	1	1	1	1	CoA	binding	domain
DapB_N	PF01113.15	gi|479325574|ref|YP_007865629.1|	-	0.0096	15.8	0.7	0.068	13.0	0.3	2.5	2	0	0	2	2	2	1	Dihydrodipicolinate	reductase,	N-terminus
XdhC_C	PF13478.1	gi|479325574|ref|YP_007865629.1|	-	0.072	13.3	0.1	9.4	6.5	0.0	2.8	2	1	0	2	2	2	0	XdhC	Rossmann	domain
NAD_binding_7	PF13241.1	gi|479325574|ref|YP_007865629.1|	-	0.081	13.1	2.3	0.16	12.2	0.6	2.2	2	0	0	2	2	2	0	Putative	NAD(P)-binding
GFO_IDH_MocA	PF01408.17	gi|479325574|ref|YP_007865629.1|	-	0.087	13.3	0.0	0.19	12.2	0.0	1.6	1	0	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
NAD_Gly3P_dh_N	PF01210.18	gi|479325574|ref|YP_007865629.1|	-	0.14	11.8	2.0	0.32	10.7	0.4	2.3	2	1	0	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
DNA_pol_lambd_f	PF10391.4	gi|479325575|ref|YP_007865630.1|	-	0.034	13.7	0.0	0.078	12.5	0.0	1.7	1	1	0	1	1	1	0	Fingers	domain	of	DNA	polymerase	lambda
DZR	PF12773.2	gi|479325577|ref|YP_007865632.1|	-	0.0011	18.7	6.4	0.021	14.6	3.2	2.2	1	1	1	2	2	2	2	Double	zinc	ribbon
zf-H2C2_2	PF13465.1	gi|479325577|ref|YP_007865632.1|	-	0.005	17.0	7.3	0.089	13.1	0.2	3.1	3	0	0	3	3	3	1	Zinc-finger	double	domain
Prok-RING_1	PF14446.1	gi|479325577|ref|YP_007865632.1|	-	0.0062	16.2	6.3	0.066	12.9	1.8	2.2	2	0	0	2	2	2	1	Prokaryotic	RING	finger	family	1
Rep_fac-A_C	PF08646.5	gi|479325577|ref|YP_007865632.1|	-	0.032	13.9	2.9	0.044	13.4	2.0	1.2	1	0	0	1	1	1	0	Replication	factor-A	C	terminal	domain
zf-C4_Topoisom	PF01396.14	gi|479325577|ref|YP_007865632.1|	-	0.035	13.6	7.9	0.61	9.6	0.3	3.1	3	0	0	3	3	3	0	Topoisomerase	DNA	binding	C4	zinc	finger
zf-BED	PF02892.10	gi|479325577|ref|YP_007865632.1|	-	0.042	13.5	12.2	0.79	9.5	0.2	3.2	1	1	2	3	3	3	0	BED	zinc	finger
C1_2	PF03107.11	gi|479325577|ref|YP_007865632.1|	-	0.054	13.6	5.5	0.064	13.3	2.1	2.2	2	1	0	2	2	2	0	C1	domain
zinc_ribbon_2	PF13240.1	gi|479325577|ref|YP_007865632.1|	-	0.055	12.9	0.5	0.055	12.9	0.3	3.2	3	1	0	3	3	3	0	zinc-ribbon	domain
A2L_zn_ribbon	PF08792.5	gi|479325577|ref|YP_007865632.1|	-	0.065	12.7	7.6	0.2	11.1	0.9	2.7	2	1	1	3	3	3	0	A2L	zinc	ribbon	domain
HypA	PF01155.14	gi|479325577|ref|YP_007865632.1|	-	0.082	12.6	3.5	0.27	10.9	0.8	2.0	1	1	1	2	2	2	0	Hydrogenase	expression/synthesis	hypA	family
DUF1272	PF06906.6	gi|479325577|ref|YP_007865632.1|	-	0.087	12.6	7.2	0.59	10.0	5.0	2.2	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1272)
zf-B_box	PF00643.19	gi|479325577|ref|YP_007865632.1|	-	0.11	12.4	7.9	0.96	9.3	3.8	2.7	2	1	0	2	2	2	0	B-box	zinc	finger
zf-ribbon_3	PF13248.1	gi|479325577|ref|YP_007865632.1|	-	0.11	11.7	0.6	0.11	11.7	0.4	3.2	3	1	0	3	3	3	0	zinc-ribbon	domain
DUF4379	PF14311.1	gi|479325577|ref|YP_007865632.1|	-	0.14	11.9	2.5	0.29	10.9	1.7	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4379)
zf-AN1	PF01428.11	gi|479325577|ref|YP_007865632.1|	-	0.17	11.8	8.3	2.3	8.1	1.6	2.7	1	1	2	3	3	3	0	AN1-like	Zinc	finger
zf-C3HC4_3	PF13920.1	gi|479325577|ref|YP_007865632.1|	-	0.22	11.2	9.1	3.7	7.2	2.4	2.5	1	1	1	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
DNA_ligase_ZBD	PF03119.11	gi|479325577|ref|YP_007865632.1|	-	0.23	11.1	0.3	0.23	11.1	0.2	2.8	3	1	1	4	4	3	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-tcix	PF14952.1	gi|479325577|ref|YP_007865632.1|	-	0.23	10.8	9.1	0.2	10.9	1.4	2.3	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
Sgf11	PF08209.6	gi|479325577|ref|YP_007865632.1|	-	0.41	9.9	5.5	15	4.9	0.1	3.2	3	0	0	3	3	3	0	Sgf11	(transcriptional	regulation	protein)
zf-C3HC4_2	PF13923.1	gi|479325577|ref|YP_007865632.1|	-	0.45	10.5	6.0	1.8	8.6	0.7	2.3	2	0	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
PhnA_Zn_Ribbon	PF08274.7	gi|479325577|ref|YP_007865632.1|	-	0.46	10.2	3.6	13	5.7	0.8	2.4	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
zf-IS66	PF13005.2	gi|479325577|ref|YP_007865632.1|	-	0.51	10.3	0.1	0.51	10.3	0.1	2.6	2	1	1	3	3	3	0	zinc-finger	binding	domain	of	transposase	IS66
zf-TFIIB	PF13453.1	gi|479325577|ref|YP_007865632.1|	-	0.52	9.5	5.4	3.3	6.9	0.1	2.5	3	0	0	3	3	2	0	Transcription	factor	zinc-finger
zf-C2HC5	PF06221.8	gi|479325577|ref|YP_007865632.1|	-	0.53	10.0	6.5	0.75	9.6	2.2	2.4	1	1	1	2	2	2	0	Putative	zinc	finger	motif,	C2HC5-type
zf-RING_3	PF14369.1	gi|479325577|ref|YP_007865632.1|	-	0.71	9.9	7.2	1.4	8.9	0.2	2.5	2	1	0	2	2	2	0	zinc-finger
zf-RING_4	PF14570.1	gi|479325577|ref|YP_007865632.1|	-	0.72	9.4	8.7	1.4	8.5	1.9	2.3	2	0	0	2	2	2	0	RING/Ubox	like	zinc-binding	domain
Mu-like_Com	PF10122.4	gi|479325577|ref|YP_007865632.1|	-	0.75	8.9	7.7	3.5	6.7	1.5	2.2	2	0	0	2	2	2	0	Mu-like	prophage	protein	Com
C1_1	PF00130.17	gi|479325577|ref|YP_007865632.1|	-	0.83	9.4	5.8	1.5	8.6	1.3	2.1	1	1	1	2	2	2	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
zf-C2H2_4	PF13894.1	gi|479325577|ref|YP_007865632.1|	-	0.87	10.0	12.4	3	8.3	1.3	3.2	3	0	0	3	3	3	0	C2H2-type	zinc	finger
DUF329	PF03884.9	gi|479325577|ref|YP_007865632.1|	-	1.1	8.8	8.4	8.1	6.0	0.9	3.0	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF329)
zinc_ribbon_4	PF13717.1	gi|479325577|ref|YP_007865632.1|	-	1.3	8.7	11.7	0.39	10.4	4.7	2.4	2	1	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|479325577|ref|YP_007865632.1|	-	1.4	8.5	11.0	0.64	9.6	4.7	2.4	2	1	0	2	2	2	0	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|479325577|ref|YP_007865632.1|	-	1.6	8.4	6.0	3	7.5	0.9	2.1	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
zf-LITAF-like	PF10601.4	gi|479325577|ref|YP_007865632.1|	-	1.7	8.5	8.0	15	5.4	0.4	3.0	1	1	2	3	3	3	0	LITAF-like	zinc	ribbon	domain
TerY-C	PF15616.1	gi|479325577|ref|YP_007865632.1|	-	2	8.3	7.9	15	5.5	0.3	2.4	1	1	2	3	3	3	0	TerY-C	metal	binding	domain
TF_Zn_Ribbon	PF08271.7	gi|479325577|ref|YP_007865632.1|	-	2	7.7	10.3	2.9	7.2	0.2	2.9	3	0	0	3	3	3	0	TFIIB	zinc-binding
DUF581	PF04570.9	gi|479325577|ref|YP_007865632.1|	-	2	7.7	6.4	1.6	8.0	2.2	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF581)
Lar_restr_allev	PF14354.1	gi|479325577|ref|YP_007865632.1|	-	2.2	8.6	8.6	2.5	8.4	3.6	2.1	1	1	1	2	2	2	0	Restriction	alleviation	protein	Lar
Zn-ribbon_8	PF09723.5	gi|479325577|ref|YP_007865632.1|	-	2.4	8.2	10.4	1.4	8.9	5.1	2.1	2	1	0	2	2	2	0	Zinc	ribbon	domain
zf-ISL3	PF14690.1	gi|479325577|ref|YP_007865632.1|	-	2.5	8.2	8.0	13	5.8	0.1	3.0	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-C2H2	PF00096.21	gi|479325577|ref|YP_007865632.1|	-	2.6	8.5	13.6	2.8	8.4	1.6	3.2	3	0	0	3	3	3	0	Zinc	finger,	C2H2	type
DiS_P_DiS	PF06750.8	gi|479325577|ref|YP_007865632.1|	-	3	7.7	5.2	17	5.3	0.0	2.8	2	1	0	2	2	2	0	Bacterial	Peptidase	A24	N-terminal	domain
TFIIS_C	PF01096.13	gi|479325577|ref|YP_007865632.1|	-	3	7.5	8.7	0.87	9.2	0.4	2.7	3	0	0	3	3	3	0	Transcription	factor	S-II	(TFIIS)
Zn_ribbon_recom	PF13408.1	gi|479325577|ref|YP_007865632.1|	-	3.2	8.0	13.0	22	5.4	9.2	2.1	1	1	0	1	1	1	0	Recombinase	zinc	beta	ribbon	domain
zf-UBR	PF02207.15	gi|479325577|ref|YP_007865632.1|	-	3.8	7.3	6.9	2.4	7.9	3.6	1.7	1	1	0	1	1	1	0	Putative	zinc	finger	in	N-recognin	(UBR	box)
Ribosomal_S27e	PF01667.12	gi|479325577|ref|YP_007865632.1|	-	3.8	7.1	8.5	48	3.6	0.0	2.9	2	1	0	2	2	2	0	Ribosomal	protein	S27
zf-C3HC4	PF00097.20	gi|479325577|ref|YP_007865632.1|	-	4	7.1	7.6	1.7	8.3	1.6	2.2	2	0	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
ADK_lid	PF05191.9	gi|479325577|ref|YP_007865632.1|	-	4	7.1	9.1	2.4	7.9	3.2	2.4	2	1	0	2	2	2	0	Adenylate	kinase,	active	site	lid
zf-MYND	PF01753.13	gi|479325577|ref|YP_007865632.1|	-	4.1	7.3	7.5	50	3.8	5.2	2.2	1	1	0	1	1	1	0	MYND	finger
zf-CHY	PF05495.7	gi|479325577|ref|YP_007865632.1|	-	4.1	7.6	8.3	53	4.0	5.8	2.3	1	1	0	1	1	1	0	CHY	zinc	finger
Zn_Tnp_IS1595	PF12760.2	gi|479325577|ref|YP_007865632.1|	-	4.3	7.2	11.6	8.1	6.3	3.5	2.6	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
UPF0547	PF10571.4	gi|479325577|ref|YP_007865632.1|	-	4.8	6.9	11.7	1.1	8.9	0.2	3.0	3	0	0	3	3	3	0	Uncharacterised	protein	family	UPF0547
zf-RING_2	PF13639.1	gi|479325577|ref|YP_007865632.1|	-	5.8	6.8	7.1	25	4.7	4.9	2.0	1	1	0	1	1	1	0	Ring	finger	domain
FANCL_C	PF11793.3	gi|479325577|ref|YP_007865632.1|	-	5.8	6.9	9.9	2.5	8.1	0.2	2.6	2	1	0	2	2	2	0	FANCL	C-terminal	domain
zf-Di19	PF05605.7	gi|479325577|ref|YP_007865632.1|	-	6.5	6.9	10.7	4.3	7.5	0.2	3.1	2	1	1	3	3	3	0	Drought	induced	19	protein	(Di19),	zinc-binding
Tnp_zf-ribbon_2	PF13842.1	gi|479325577|ref|YP_007865632.1|	-	7.8	6.9	12.7	30	5.1	8.8	2.1	1	1	0	1	1	1	0	DDE_Tnp_1-like	zinc-ribbon
zf-HIT	PF04438.11	gi|479325577|ref|YP_007865632.1|	-	9.9	5.9	17.2	42	3.8	0.2	3.0	2	1	0	2	2	2	0	HIT	zinc	finger
zf-RING_5	PF14634.1	gi|479325577|ref|YP_007865632.1|	-	10	5.9	10.7	2.2e+03	-1.6	7.4	2.7	1	1	0	1	1	1	0	zinc-RING	finger	domain
DUF1829	PF08862.5	gi|479325578|ref|YP_007865633.1|	-	1.1	9.5	3.6	8.4	6.7	0.2	2.4	1	1	2	3	3	3	0	Domain	of	unknown	function	DUF1829
DUF4488	PF14869.1	gi|479325579|ref|YP_007865634.1|	-	0.037	13.5	0.3	0.058	12.9	0.2	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4488)
HPS3_C	PF14763.1	gi|479325579|ref|YP_007865634.1|	-	0.04	12.8	0.1	0.046	12.7	0.0	1.0	1	0	0	1	1	1	0	Hermansky-Pudlak	syndrome	3,	C-terminal
DNA_pol3_delta	PF06144.8	gi|479325579|ref|YP_007865634.1|	-	0.083	12.3	0.0	0.13	11.7	0.0	1.5	1	1	1	2	2	2	0	DNA	polymerase	III,	delta	subunit
Met_10	PF02475.11	gi|479325580|ref|YP_007865635.1|	-	0.017	14.7	0.8	0.023	14.2	0.3	1.4	1	1	0	1	1	1	0	Met-10+	like-protein
NAD_binding_8	PF13450.1	gi|479325581|ref|YP_007865636.1|	-	0.00019	21.3	0.0	0.00058	19.8	0.0	1.8	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
UDPG_MGDP_dh_N	PF03721.9	gi|479325581|ref|YP_007865636.1|	-	0.00031	20.1	0.0	0.00057	19.3	0.0	1.4	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Pyr_redox	PF00070.22	gi|479325581|ref|YP_007865636.1|	-	0.0026	18.1	0.0	0.0072	16.7	0.0	1.7	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_Gly3P_dh_N	PF01210.18	gi|479325581|ref|YP_007865636.1|	-	0.0065	16.2	0.0	0.01	15.5	0.0	1.3	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
DAO	PF01266.19	gi|479325581|ref|YP_007865636.1|	-	0.0099	14.8	0.1	0.017	14.0	0.1	1.4	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
3HCDH_N	PF02737.13	gi|479325581|ref|YP_007865636.1|	-	0.06	12.9	0.0	0.1	12.2	0.0	1.4	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
TrkA_N	PF02254.13	gi|479325581|ref|YP_007865636.1|	-	0.15	12.0	0.0	0.31	11.0	0.0	1.5	1	0	0	1	1	1	0	TrkA-N	domain
ApbA	PF02558.11	gi|479325581|ref|YP_007865636.1|	-	0.16	11.4	0.0	0.28	10.6	0.0	1.4	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
tRNA-synt_1	PF00133.17	gi|479325582|ref|YP_007865637.1|	-	2.5e-122	408.9	0.3	1.7e-121	406.1	0.2	2.0	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|479325582|ref|YP_007865637.1|	-	1.3e-31	109.4	2.9	3e-31	108.2	1.7	1.9	1	1	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.6	gi|479325582|ref|YP_007865637.1|	-	6.1e-27	94.2	0.2	1.2e-11	43.9	0.0	3.4	3	0	0	3	3	3	3	tRNA	synthetases	class	I	(M)
tRNA-synt_1_2	PF13603.1	gi|479325582|ref|YP_007865637.1|	-	4.9e-06	25.9	0.2	0.0007	18.9	0.1	3.0	1	1	2	3	3	3	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1d	PF00750.14	gi|479325582|ref|YP_007865637.1|	-	0.00022	20.1	0.0	0.054	12.3	0.0	2.6	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(R)
tRNA-synt_1e	PF01406.14	gi|479325582|ref|YP_007865637.1|	-	0.0032	16.6	0.0	0.2	10.7	0.0	2.5	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(C)	catalytic	domain
Aminotran_1_2	PF00155.16	gi|479325583|ref|YP_007865638.1|	-	3.3e-82	276.3	0.0	3.8e-82	276.1	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
DegT_DnrJ_EryC1	PF01041.12	gi|479325583|ref|YP_007865638.1|	-	4.2e-11	42.4	0.0	6.2e-11	41.9	0.0	1.2	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_5	PF00266.14	gi|479325583|ref|YP_007865638.1|	-	1.1e-07	30.9	0.0	3.1e-07	29.4	0.0	1.6	2	0	0	2	2	2	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.16	gi|479325583|ref|YP_007865638.1|	-	0.00011	21.4	0.0	0.00019	20.6	0.0	1.3	1	0	0	1	1	1	1	Beta-eliminating	lyase
SfsA	PF03749.8	gi|479325583|ref|YP_007865638.1|	-	0.00048	19.6	0.1	0.0017	17.8	0.0	1.8	2	0	0	2	2	2	1	Sugar	fermentation	stimulation	protein
Cys_Met_Meta_PP	PF01053.15	gi|479325583|ref|YP_007865638.1|	-	0.001	17.4	0.0	0.0017	16.7	0.0	1.2	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
IGPS	PF00218.16	gi|479325584|ref|YP_007865639.1|	-	2.5e-82	275.7	0.2	2.8e-82	275.5	0.2	1.0	1	0	0	1	1	1	1	Indole-3-glycerol	phosphate	synthase
His_biosynth	PF00977.16	gi|479325584|ref|YP_007865639.1|	-	5.8e-07	29.0	0.2	0.00082	18.7	0.0	2.6	1	1	2	3	3	3	2	Histidine	biosynthesis	protein
TMP-TENI	PF02581.12	gi|479325584|ref|YP_007865639.1|	-	0.035	13.2	0.0	0.13	11.3	0.0	2.0	2	1	0	2	2	2	0	Thiamine	monophosphate	synthase/TENI
ThiG	PF05690.9	gi|479325584|ref|YP_007865639.1|	-	0.042	12.9	0.0	0.29	10.1	0.0	2.0	2	0	0	2	2	2	0	Thiazole	biosynthesis	protein	ThiG
NeuB	PF03102.9	gi|479325584|ref|YP_007865639.1|	-	0.046	12.8	0.0	1.7	7.7	0.0	2.1	1	1	1	2	2	2	0	NeuB	family
NanE	PF04131.9	gi|479325584|ref|YP_007865639.1|	-	0.09	11.7	0.1	0.19	10.6	0.0	1.7	2	1	0	2	2	2	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
QRPTase_C	PF01729.14	gi|479325584|ref|YP_007865639.1|	-	0.12	11.8	0.1	0.21	11.0	0.1	1.4	1	0	0	1	1	1	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
GATase	PF00117.23	gi|479325585|ref|YP_007865640.1|	-	3.1e-50	170.3	0.0	3.4e-50	170.1	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|479325585|ref|YP_007865640.1|	-	5.1e-14	52.2	0.0	8.7e-14	51.4	0.0	1.4	1	0	0	1	1	1	1	Peptidase	C26
Chorismate_bind	PF00425.13	gi|479325586|ref|YP_007865641.1|	-	1.7e-94	315.9	0.0	2.1e-94	315.6	0.0	1.1	1	0	0	1	1	1	1	chorismate	binding	enzyme
Anth_synt_I_N	PF04715.8	gi|479325586|ref|YP_007865641.1|	-	2.9e-20	72.7	0.0	7.5e-20	71.3	0.0	1.8	1	0	0	1	1	1	1	Anthranilate	synthase	component	I,	N	terminal	region
PRAI	PF00697.17	gi|479325587|ref|YP_007865642.1|	-	2.6e-35	121.7	0.0	2.9e-35	121.6	0.0	1.0	1	0	0	1	1	1	1	N-(5'phosphoribosyl)anthranilate	(PRA)	isomerase
CYTH	PF01928.16	gi|479325587|ref|YP_007865642.1|	-	0.1	12.2	0.1	0.14	11.8	0.0	1.1	1	0	0	1	1	1	0	CYTH	domain
Glycos_transf_3	PF00591.16	gi|479325588|ref|YP_007865643.1|	-	2.5e-74	249.8	0.0	3.5e-74	249.4	0.0	1.1	1	0	0	1	1	1	1	Glycosyl	transferase	family,	a/b	domain
Glycos_trans_3N	PF02885.12	gi|479325588|ref|YP_007865643.1|	-	3.4e-21	74.5	0.4	5.5e-21	73.9	0.3	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family,	helical	bundle	domain
Trp_syntA	PF00290.15	gi|479325589|ref|YP_007865644.1|	-	1.7e-36	125.0	0.0	2e-36	124.8	0.0	1.1	1	0	0	1	1	1	1	Tryptophan	synthase	alpha	chain
His_biosynth	PF00977.16	gi|479325589|ref|YP_007865644.1|	-	3.6e-05	23.1	0.2	0.00012	21.4	0.1	1.8	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
PcrB	PF01884.12	gi|479325589|ref|YP_007865644.1|	-	0.00043	19.6	0.0	0.00089	18.5	0.0	1.6	1	0	0	1	1	1	1	PcrB	family
NMO	PF03060.10	gi|479325589|ref|YP_007865644.1|	-	0.0066	15.6	0.1	0.013	14.6	0.0	1.5	2	0	0	2	2	2	1	Nitronate	monooxygenase
TMP-TENI	PF02581.12	gi|479325589|ref|YP_007865644.1|	-	0.013	14.6	0.1	0.026	13.6	0.0	1.5	2	0	0	2	2	2	0	Thiamine	monophosphate	synthase/TENI
FMN_dh	PF01070.13	gi|479325589|ref|YP_007865644.1|	-	0.1	11.4	0.0	0.16	10.8	0.0	1.2	1	0	0	1	1	1	0	FMN-dependent	dehydrogenase
PALP	PF00291.20	gi|479325590|ref|YP_007865645.1|	-	5.6e-37	127.6	0.0	7.6e-37	127.1	0.0	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
Acylphosphatase	PF00708.13	gi|479325591|ref|YP_007865646.1|	-	9.7e-30	102.5	0.0	1e-29	102.4	0.0	1.0	1	0	0	1	1	1	1	Acylphosphatase
NAD_binding_5	PF07994.7	gi|479325592|ref|YP_007865647.1|	-	8.1e-50	169.9	0.0	2.4e-49	168.3	0.0	1.6	1	1	0	1	1	1	1	Myo-inositol-1-phosphate	synthase
Inos-1-P_synth	PF01658.12	gi|479325592|ref|YP_007865647.1|	-	5.2e-29	100.3	0.0	9.4e-29	99.5	0.0	1.4	1	0	0	1	1	1	1	Myo-inositol-1-phosphate	synthase
PPDK_N	PF01326.14	gi|479325593|ref|YP_007865648.1|	-	6.9e-100	334.2	0.1	1.4e-99	333.2	0.1	1.5	1	0	0	1	1	1	1	Pyruvate	phosphate	dikinase,	PEP/pyruvate	binding	domain
PEP-utilizers_C	PF02896.13	gi|479325593|ref|YP_007865648.1|	-	1.1e-82	277.3	0.0	1.8e-82	276.5	0.0	1.3	1	0	0	1	1	1	1	PEP-utilising	enzyme,	TIM	barrel	domain
PEP-utilizers	PF00391.18	gi|479325593|ref|YP_007865648.1|	-	7e-27	92.8	0.4	1.8e-26	91.4	0.3	1.8	1	0	0	1	1	1	1	PEP-utilising	enzyme,	mobile	domain
Snf7	PF03357.16	gi|479325594|ref|YP_007865649.1|	-	1.9e-05	24.1	1.9	2.6e-05	23.6	1.3	1.4	1	1	0	1	1	1	1	Snf7
LOH1CR12	PF10158.4	gi|479325594|ref|YP_007865649.1|	-	0.00079	19.2	0.2	0.0016	18.1	0.1	1.6	1	0	0	1	1	1	1	Tumour	suppressor	protein
Pox_F11	PF04943.7	gi|479325594|ref|YP_007865649.1|	-	0.0022	16.9	0.1	0.0024	16.8	0.1	1.2	1	0	0	1	1	1	1	Poxvirus	F11	protein
DUF1212	PF06738.7	gi|479325594|ref|YP_007865649.1|	-	0.012	15.0	0.1	0.019	14.4	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1212)
UbiD	PF01977.11	gi|479325596|ref|YP_007865651.1|	-	1.2e-135	452.1	0.0	1.4e-135	451.9	0.0	1.0	1	0	0	1	1	1	1	3-octaprenyl-4-hydroxybenzoate	carboxy-lyase
PALP	PF00291.20	gi|479325597|ref|YP_007865652.1|	-	2.1e-74	250.5	0.8	2.5e-74	250.2	0.6	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
HypA	PF01155.14	gi|479325597|ref|YP_007865652.1|	-	0.0093	15.6	0.1	0.016	14.8	0.1	1.3	1	0	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
zf-ribbon_3	PF13248.1	gi|479325597|ref|YP_007865652.1|	-	0.019	14.1	0.1	0.035	13.3	0.1	1.5	1	0	0	1	1	1	0	zinc-ribbon	domain
RNA_POL_M_15KD	PF02150.11	gi|479325597|ref|YP_007865652.1|	-	0.042	13.5	0.9	1.8	8.3	0.1	2.3	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
AA_kinase	PF00696.23	gi|479325598|ref|YP_007865653.1|	-	1.2e-46	159.2	0.5	2.1e-46	158.4	0.1	1.6	2	0	0	2	2	2	1	Amino	acid	kinase	family
ACT	PF01842.20	gi|479325598|ref|YP_007865653.1|	-	8.3e-07	28.3	1.8	0.00038	19.8	0.1	3.0	3	0	0	3	3	3	2	ACT	domain
T2SM	PF04612.7	gi|479325598|ref|YP_007865653.1|	-	0.056	13.2	0.0	0.094	12.5	0.0	1.3	1	0	0	1	1	1	0	Type	II	secretion	system	(T2SS),	protein	M
DUF1327	PF07041.6	gi|479325598|ref|YP_007865653.1|	-	0.067	13.0	0.2	0.2	11.5	0.1	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1327)
Semialdhyde_dh	PF01118.19	gi|479325599|ref|YP_007865654.1|	-	2.8e-28	98.6	0.0	4.9e-28	97.8	0.0	1.4	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Semialdhyde_dhC	PF02774.13	gi|479325599|ref|YP_007865654.1|	-	7e-27	94.4	0.0	1e-26	93.9	0.0	1.3	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
Gp_dh_C	PF02800.15	gi|479325599|ref|YP_007865654.1|	-	0.11	11.9	0.2	0.45	9.9	0.0	2.1	3	0	0	3	3	3	0	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
PHP_C	PF13263.1	gi|479325600|ref|YP_007865655.1|	-	3.3e-12	45.7	0.0	7.7e-12	44.5	0.0	1.7	1	0	0	1	1	1	1	PHP-associated
PHP	PF02811.14	gi|479325600|ref|YP_007865655.1|	-	3e-07	30.4	0.1	9.4e-07	28.7	0.1	1.9	1	1	0	1	1	1	1	PHP	domain
MCM_N	PF14551.1	gi|479325600|ref|YP_007865655.1|	-	0.13	12.7	0.2	0.23	11.9	0.1	1.4	2	0	0	2	2	2	0	MCM	N-terminal	domain
DUF3135	PF11333.3	gi|479325600|ref|YP_007865655.1|	-	0.14	12.3	0.2	0.24	11.5	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3135)
DUF650	PF04894.7	gi|479325601|ref|YP_007865656.1|	-	7.7e-92	307.6	0.5	1.2e-91	307.0	0.3	1.3	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF650)
DUF651	PF04895.7	gi|479325601|ref|YP_007865656.1|	-	4.4e-36	122.8	0.2	7.5e-36	122.1	0.1	1.4	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF651)
OTCace	PF00185.19	gi|479325602|ref|YP_007865657.1|	-	3.9e-50	169.8	0.0	5.5e-50	169.3	0.0	1.2	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
OTCace_N	PF02729.16	gi|479325602|ref|YP_007865657.1|	-	6.1e-40	136.1	0.0	9.3e-40	135.5	0.0	1.3	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
DUF4056	PF13265.1	gi|479325602|ref|YP_007865657.1|	-	0.059	12.3	0.0	0.1	11.5	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4056)
HTH_45	PF14947.1	gi|479325603|ref|YP_007865658.1|	-	0.00085	19.0	0.2	0.0019	17.9	0.1	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix
Ribosomal_S19e	PF01090.14	gi|479325603|ref|YP_007865658.1|	-	0.0046	16.3	0.1	0.0077	15.6	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	protein	S19e
HTH_24	PF13412.1	gi|479325603|ref|YP_007865658.1|	-	0.014	14.7	1.5	0.028	13.8	0.3	2.1	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
DUF4443	PF14544.1	gi|479325603|ref|YP_007865658.1|	-	0.023	14.5	0.0	0.032	14.1	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4443)
Penicillinase_R	PF03965.11	gi|479325603|ref|YP_007865658.1|	-	0.14	12.2	0.0	0.27	11.3	0.0	1.4	1	0	0	1	1	1	0	Penicillinase	repressor
NAD_kinase	PF01513.16	gi|479325604|ref|YP_007865659.1|	-	2.5e-65	220.1	0.2	2.8e-65	219.9	0.1	1.0	1	0	0	1	1	1	1	ATP-NAD	kinase
DAGK_cat	PF00781.19	gi|479325604|ref|YP_007865659.1|	-	4.9e-06	26.0	0.1	2e-05	24.0	0.0	1.9	2	0	0	2	2	2	1	Diacylglycerol	kinase	catalytic	domain
Lysine_decarbox	PF03641.9	gi|479325604|ref|YP_007865659.1|	-	0.13	12.0	0.0	0.2	11.4	0.0	1.4	1	0	0	1	1	1	0	Possible	lysine	decarboxylase
Rrf2	PF02082.15	gi|479325605|ref|YP_007865660.1|	-	0.0019	18.3	0.0	0.064	13.3	0.0	2.6	2	1	0	2	2	2	1	Transcriptional	regulator
HTH_45	PF14947.1	gi|479325605|ref|YP_007865660.1|	-	0.0079	15.9	1.0	0.016	15.0	0.0	2.0	2	1	0	2	2	2	1	Winged	helix-turn-helix
TrmB	PF01978.14	gi|479325605|ref|YP_007865660.1|	-	0.013	15.2	0.3	0.086	12.5	0.0	2.4	2	1	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
GET2	PF08690.5	gi|479325605|ref|YP_007865660.1|	-	0.033	13.4	0.5	0.06	12.5	0.4	1.4	1	0	0	1	1	1	0	GET	complex	subunit	GET2
MarR_2	PF12802.2	gi|479325605|ref|YP_007865660.1|	-	0.057	13.0	0.0	0.13	11.9	0.0	1.5	1	0	0	1	1	1	0	MarR	family
HTH_5	PF01022.15	gi|479325605|ref|YP_007865660.1|	-	0.074	12.7	0.0	0.42	10.3	0.0	2.3	2	1	2	4	4	4	0	Bacterial	regulatory	protein,	arsR	family
MarR	PF01047.17	gi|479325605|ref|YP_007865660.1|	-	0.075	12.7	0.0	1.2	8.9	0.0	2.4	2	0	0	2	2	2	0	MarR	family
HTH_Crp_2	PF13545.1	gi|479325605|ref|YP_007865660.1|	-	0.12	12.1	0.0	0.27	11.0	0.0	1.5	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
Terminase_5	PF06056.7	gi|479325605|ref|YP_007865660.1|	-	0.3	10.6	2.1	0.57	9.7	0.2	2.3	2	0	0	2	2	2	0	Putative	ATPase	subunit	of	terminase	(gpP-like)
Med4	PF10018.4	gi|479325606|ref|YP_007865661.1|	-	0.044	13.1	0.2	0.046	13.1	0.1	1.1	1	0	0	1	1	1	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
Transcrip_reg	PF01709.15	gi|479325606|ref|YP_007865661.1|	-	0.061	12.4	0.3	0.077	12.1	0.2	1.2	1	0	0	1	1	1	0	Transcriptional	regulator
Ribosomal_L20	PF00453.13	gi|479325606|ref|YP_007865661.1|	-	0.18	11.7	2.4	0.13	12.2	0.7	1.6	2	0	0	2	2	2	0	Ribosomal	protein	L20
ABC_tran_2	PF12848.2	gi|479325606|ref|YP_007865661.1|	-	0.31	10.9	5.1	0.55	10.1	3.5	1.4	1	0	0	1	1	1	0	ABC	transporter
FKBP_N	PF01346.13	gi|479325606|ref|YP_007865661.1|	-	0.39	10.7	3.1	0.55	10.2	2.1	1.3	1	0	0	1	1	1	0	Domain	amino	terminal	to	FKBP-type	peptidyl-prolyl	isomerase
DUF4355	PF14265.1	gi|479325606|ref|YP_007865661.1|	-	0.69	9.8	8.4	0.3	11.0	4.4	1.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4355)
DEAD_2	PF06733.10	gi|479325606|ref|YP_007865661.1|	-	0.83	9.0	5.2	0.45	9.8	1.4	1.8	1	1	1	2	2	2	0	DEAD_2
Elf1	PF05129.8	gi|479325607|ref|YP_007865662.1|	-	4.1	7.1	6.3	0.87	9.3	0.4	2.5	2	1	0	2	2	2	0	Transcription	elongation	factor	Elf1	like
TDH	PF03347.8	gi|479325608|ref|YP_007865663.1|	-	0.00089	18.8	0.2	0.0013	18.3	0.1	1.2	1	0	0	1	1	1	1	Vibrio	thermostable	direct	hemolysin
Zn_Tnp_IS91	PF14319.1	gi|479325608|ref|YP_007865663.1|	-	0.0078	15.7	1.0	0.28	10.7	0.1	2.4	2	1	0	2	2	2	1	Transposase	zinc-binding	domain
DZR	PF12773.2	gi|479325608|ref|YP_007865663.1|	-	0.22	11.3	4.8	0.39	10.5	0.2	2.2	2	0	0	2	2	2	0	Double	zinc	ribbon
Prok-RING_2	PF14445.1	gi|479325608|ref|YP_007865663.1|	-	0.56	10.1	2.8	15	5.6	0.3	2.5	2	0	0	2	2	2	0	Prokaryotic	RING	finger	family	2
Cpn60_TCP1	PF00118.19	gi|479325609|ref|YP_007865664.1|	-	5.2e-159	529.9	12.0	5.9e-159	529.7	8.3	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
HHH_5	PF14520.1	gi|479325610|ref|YP_007865665.1|	-	0.0071	16.4	0.1	0.011	15.8	0.1	1.4	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
APG17	PF04108.7	gi|479325610|ref|YP_007865665.1|	-	0.014	14.2	0.1	0.016	14.0	0.1	1.0	1	0	0	1	1	1	0	Autophagy	protein	Apg17
SapB_1	PF05184.10	gi|479325610|ref|YP_007865665.1|	-	0.017	14.9	0.9	0.035	13.9	0.6	1.5	1	0	0	1	1	1	0	Saposin-like	type	B,	region	1
DUF2095	PF09868.4	gi|479325610|ref|YP_007865665.1|	-	0.047	13.4	0.0	0.12	12.1	0.0	1.6	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2095)
Bac_DNA_binding	PF00216.16	gi|479325610|ref|YP_007865665.1|	-	0.12	12.4	0.6	0.25	11.3	0.4	1.5	1	0	0	1	1	1	0	Bacterial	DNA-binding	protein
TrmB	PF01978.14	gi|479325611|ref|YP_007865666.1|	-	0.0031	17.1	0.1	0.0046	16.6	0.1	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
RPA_C	PF08784.6	gi|479325611|ref|YP_007865666.1|	-	0.021	15.2	0.1	0.027	14.9	0.1	1.2	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
DUF4423	PF14394.1	gi|479325611|ref|YP_007865666.1|	-	0.03	13.8	0.1	0.043	13.3	0.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
APC2	PF08672.6	gi|479325611|ref|YP_007865666.1|	-	0.031	14.5	2.0	0.24	11.6	0.6	2.5	1	1	1	2	2	2	0	Anaphase	promoting	complex	(APC)	subunit	2
DUF1500	PF07389.7	gi|479325611|ref|YP_007865666.1|	-	0.036	14.0	0.0	0.049	13.6	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1500)
DUF763	PF05559.6	gi|479325611|ref|YP_007865666.1|	-	0.074	11.9	0.1	0.083	11.8	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF763)
Stork_head	PF10264.4	gi|479325611|ref|YP_007865666.1|	-	0.085	13.0	0.1	7.6	6.7	0.0	2.1	1	1	1	2	2	2	0	Winged	helix	Storkhead-box1	domain
DUF3253	PF11625.3	gi|479325611|ref|YP_007865666.1|	-	0.12	12.2	0.0	0.66	9.9	0.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3253)
DDE_Tnp_1_assoc	PF13808.1	gi|479325611|ref|YP_007865666.1|	-	0.13	11.9	0.0	0.2	11.3	0.0	1.4	1	1	0	1	1	1	0	DDE_Tnp_1-associated
EF-hand_8	PF13833.1	gi|479325611|ref|YP_007865666.1|	-	0.23	11.0	0.7	3.8	7.1	0.5	2.2	1	1	0	1	1	1	0	EF-hand	domain	pair
tRNA-synt_1d	PF00750.14	gi|479325614|ref|YP_007865669.1|	-	4.1e-44	150.8	0.6	1.4e-22	80.0	0.2	2.2	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(R)
DALR_1	PF05746.10	gi|479325614|ref|YP_007865669.1|	-	4.7e-29	100.7	0.2	2.3e-28	98.5	0.1	2.3	2	0	0	2	2	2	1	DALR	anticodon	binding	domain
Arg_tRNA_synt_N	PF03485.11	gi|479325614|ref|YP_007865669.1|	-	6.4e-07	29.8	0.7	2.5e-06	27.9	0.0	2.5	2	0	0	2	2	2	1	Arginyl	tRNA	synthetase	N	terminal	domain
tRNA-synt_1g	PF09334.6	gi|479325614|ref|YP_007865669.1|	-	0.00011	21.0	0.0	0.032	12.8	0.0	2.7	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(M)
tRNA-synt_1e	PF01406.14	gi|479325614|ref|YP_007865669.1|	-	0.00022	20.4	0.4	0.37	9.8	0.0	2.9	2	2	1	3	3	3	2	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1f	PF01921.13	gi|479325614|ref|YP_007865669.1|	-	0.016	13.9	0.5	0.18	10.4	0.0	2.6	3	0	0	3	3	3	0	tRNA	synthetases	class	I	(K)
BP28CT	PF08146.7	gi|479325614|ref|YP_007865669.1|	-	0.05	13.3	0.1	0.2	11.3	0.1	2.0	1	0	0	1	1	1	0	BP28CT	(NUC211)	domain
UPF0147	PF03685.8	gi|479325615|ref|YP_007865670.1|	-	3.8e-38	129.2	1.3	4.2e-38	129.0	0.9	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0147)
UPF0253	PF06786.7	gi|479325615|ref|YP_007865670.1|	-	0.0093	16.0	0.3	0.45	10.6	0.1	2.1	1	1	1	2	2	2	2	Uncharacterised	protein	family	(UPF0253)
Auto_anti-p27	PF06677.7	gi|479325616|ref|YP_007865671.1|	-	3e-20	71.6	1.0	4.4e-20	71.1	0.7	1.2	1	0	0	1	1	1	1	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
DUF2043	PF09740.4	gi|479325616|ref|YP_007865671.1|	-	0.013	15.6	0.1	0.025	14.6	0.1	1.5	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2043)
DUF592	PF04574.8	gi|479325616|ref|YP_007865671.1|	-	0.062	12.8	0.3	0.079	12.5	0.2	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF592)
zf-P11	PF03854.9	gi|479325616|ref|YP_007865671.1|	-	0.11	12.0	0.1	0.18	11.3	0.1	1.4	1	0	0	1	1	1	0	P-11	zinc	finger
Rieske	PF00355.21	gi|479325616|ref|YP_007865671.1|	-	0.11	12.0	0.0	0.16	11.5	0.0	1.2	1	0	0	1	1	1	0	Rieske	[2Fe-2S]	domain
RPA_interact_C	PF14768.1	gi|479325616|ref|YP_007865671.1|	-	0.13	12.7	0.1	0.18	12.1	0.0	1.3	1	0	0	1	1	1	0	Replication	protein	A	interacting	C-terminal
Thymidylate_kin	PF02223.12	gi|479325617|ref|YP_007865672.1|	-	7.4e-44	149.3	0.1	8.5e-44	149.1	0.1	1.0	1	0	0	1	1	1	1	Thymidylate	kinase
AAA_17	PF13207.1	gi|479325617|ref|YP_007865672.1|	-	8.2e-09	36.3	0.3	4.1e-08	34.0	0.1	1.9	1	1	0	2	2	2	1	AAA	domain
AAA_18	PF13238.1	gi|479325617|ref|YP_007865672.1|	-	1.6e-07	31.6	1.7	4.3e-07	30.2	0.2	2.1	1	1	1	2	2	2	1	AAA	domain
AAA_28	PF13521.1	gi|479325617|ref|YP_007865672.1|	-	1.4e-06	28.3	0.0	1.8e-06	28.0	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
SKI	PF01202.17	gi|479325617|ref|YP_007865672.1|	-	1.8e-05	24.6	0.3	0.0014	18.4	0.0	2.2	2	0	0	2	2	2	1	Shikimate	kinase
dNK	PF01712.14	gi|479325617|ref|YP_007865672.1|	-	0.00021	21.2	1.5	0.00041	20.2	0.5	1.9	2	1	0	2	2	2	1	Deoxynucleoside	kinase
AAA_14	PF13173.1	gi|479325617|ref|YP_007865672.1|	-	0.002	18.0	1.0	0.0028	17.5	0.1	1.9	2	1	0	2	2	2	1	AAA	domain
KaiC	PF06745.8	gi|479325617|ref|YP_007865672.1|	-	0.009	15.1	0.2	0.069	12.2	0.0	2.0	2	0	0	2	2	2	1	KaiC
KTI12	PF08433.5	gi|479325617|ref|YP_007865672.1|	-	0.012	14.8	0.1	0.035	13.3	0.0	1.7	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
AAA_33	PF13671.1	gi|479325617|ref|YP_007865672.1|	-	0.021	14.7	0.0	0.2	11.5	0.0	2.3	2	1	1	3	3	3	0	AAA	domain
KAP_NTPase	PF07693.9	gi|479325617|ref|YP_007865672.1|	-	0.022	13.7	0.0	0.022	13.7	0.0	1.2	1	1	0	1	1	1	0	KAP	family	P-loop	domain
cobW	PF02492.14	gi|479325617|ref|YP_007865672.1|	-	0.029	13.8	0.4	0.11	11.9	0.1	2.0	1	1	1	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
MMR_HSR1	PF01926.18	gi|479325617|ref|YP_007865672.1|	-	0.033	14.1	0.5	0.097	12.6	0.4	1.8	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_22	PF13401.1	gi|479325617|ref|YP_007865672.1|	-	0.033	14.3	0.0	0.072	13.2	0.0	1.6	2	0	0	2	2	1	0	AAA	domain
SRP54	PF00448.17	gi|479325617|ref|YP_007865672.1|	-	0.034	13.5	0.2	0.14	11.5	0.0	1.9	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
APS_kinase	PF01583.15	gi|479325617|ref|YP_007865672.1|	-	0.036	13.7	0.0	0.063	12.9	0.0	1.4	1	0	0	1	1	1	0	Adenylylsulphate	kinase
RNA_helicase	PF00910.17	gi|479325617|ref|YP_007865672.1|	-	0.048	13.8	0.1	0.18	11.9	0.0	2.0	2	1	0	3	3	2	0	RNA	helicase
ABC_tran	PF00005.22	gi|479325617|ref|YP_007865672.1|	-	0.051	13.8	0.0	0.1	12.8	0.0	1.6	1	0	0	1	1	1	0	ABC	transporter
AAA_19	PF13245.1	gi|479325617|ref|YP_007865672.1|	-	0.057	13.1	0.0	0.091	12.5	0.0	1.3	1	0	0	1	1	1	0	Part	of	AAA	domain
ATP_bind_1	PF03029.12	gi|479325617|ref|YP_007865672.1|	-	0.059	12.9	0.0	0.2	11.1	0.0	1.8	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
ADK	PF00406.17	gi|479325617|ref|YP_007865672.1|	-	0.062	13.1	0.1	0.77	9.6	0.1	2.2	2	0	0	2	2	2	0	Adenylate	kinase
AAA_16	PF13191.1	gi|479325617|ref|YP_007865672.1|	-	0.075	13.0	0.0	0.1	12.5	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
NACHT	PF05729.7	gi|479325617|ref|YP_007865672.1|	-	0.079	12.6	0.1	0.14	11.7	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
T2SE	PF00437.15	gi|479325617|ref|YP_007865672.1|	-	0.082	11.7	0.0	0.13	11.1	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
NTPase_1	PF03266.10	gi|479325617|ref|YP_007865672.1|	-	0.12	12.1	0.5	0.32	10.6	0.0	2.0	3	0	0	3	3	3	0	NTPase
AAA_30	PF13604.1	gi|479325617|ref|YP_007865672.1|	-	0.14	11.7	0.0	0.21	11.1	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
DUF87	PF01935.12	gi|479325617|ref|YP_007865672.1|	-	0.2	11.4	4.0	0.7	9.6	0.1	2.4	3	0	0	3	3	2	0	Domain	of	unknown	function	DUF87
CoaE	PF01121.15	gi|479325618|ref|YP_007865673.1|	-	0.061	12.7	0.0	0.1	11.9	0.0	1.3	1	0	0	1	1	1	0	Dephospho-CoA	kinase
PduV-EutP	PF10662.4	gi|479325618|ref|YP_007865673.1|	-	0.081	12.4	0.0	0.18	11.2	0.0	1.6	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
GIT_SHD	PF08518.6	gi|479325619|ref|YP_007865674.1|	-	0.16	11.3	0.2	4.7	6.6	0.1	2.3	2	0	0	2	2	2	0	Spa2	homology	domain	(SHD)	of	GIT
AAA_25	PF13481.1	gi|479325620|ref|YP_007865675.1|	-	1.7e-08	34.1	0.0	3.7e-08	32.9	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|479325620|ref|YP_007865675.1|	-	4.1e-07	30.2	0.2	1.2e-06	28.6	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_24	PF13479.1	gi|479325620|ref|YP_007865675.1|	-	1.2e-05	24.9	0.0	1.8e-05	24.4	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
KaiC	PF06745.8	gi|479325620|ref|YP_007865675.1|	-	6.1e-05	22.2	1.1	0.09	11.8	0.1	2.1	1	1	1	2	2	2	2	KaiC
AAA_16	PF13191.1	gi|479325620|ref|YP_007865675.1|	-	0.00022	21.2	0.1	0.00027	20.9	0.0	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA	PF00004.24	gi|479325620|ref|YP_007865675.1|	-	0.0014	18.8	0.0	0.002	18.3	0.0	1.3	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
ABC_tran	PF00005.22	gi|479325620|ref|YP_007865675.1|	-	0.0074	16.5	0.2	0.0093	16.2	0.1	1.3	1	1	0	1	1	1	1	ABC	transporter
RNA_helicase	PF00910.17	gi|479325620|ref|YP_007865675.1|	-	0.0092	16.1	0.1	0.075	13.2	0.0	2.1	1	1	1	2	2	2	1	RNA	helicase
AAA_18	PF13238.1	gi|479325620|ref|YP_007865675.1|	-	0.01	16.1	0.1	0.015	15.6	0.1	1.4	1	1	0	1	1	1	0	AAA	domain
Arch_ATPase	PF01637.13	gi|479325620|ref|YP_007865675.1|	-	0.011	15.4	0.4	0.015	15.0	0.3	1.2	1	0	0	1	1	1	0	Archaeal	ATPase
AAA_17	PF13207.1	gi|479325620|ref|YP_007865675.1|	-	0.028	15.2	0.0	0.049	14.4	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
ATP-synt_ab	PF00006.20	gi|479325620|ref|YP_007865675.1|	-	0.029	13.8	0.0	0.029	13.8	0.0	1.3	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
DUF258	PF03193.11	gi|479325620|ref|YP_007865675.1|	-	0.035	13.2	0.1	0.062	12.4	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
Rad51	PF08423.6	gi|479325620|ref|YP_007865675.1|	-	0.064	12.1	0.3	1.4	7.7	0.2	2.7	1	1	0	1	1	1	0	Rad51
NACHT	PF05729.7	gi|479325620|ref|YP_007865675.1|	-	0.086	12.4	0.0	0.18	11.4	0.0	1.5	2	0	0	2	2	2	0	NACHT	domain
IstB_IS21	PF01695.12	gi|479325620|ref|YP_007865675.1|	-	0.09	12.1	0.0	0.27	10.6	0.0	1.8	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
Hpr_kinase_C	PF07475.7	gi|479325620|ref|YP_007865675.1|	-	0.11	11.8	0.1	0.17	11.1	0.0	1.3	1	0	0	1	1	1	0	HPr	Serine	kinase	C-terminal	domain
DUF46	PF01864.12	gi|479325621|ref|YP_007865676.1|	-	7.1e-41	139.9	9.4	3.3e-40	137.8	6.5	1.7	1	1	0	1	1	1	1	Putative	integral	membrane	protein	DUF46
CTP_transf_1	PF01148.15	gi|479325621|ref|YP_007865676.1|	-	1.7e-05	24.6	6.9	1.7e-05	24.6	4.8	1.9	1	1	1	2	2	2	1	Cytidylyltransferase	family
RhodobacterPufX	PF11511.3	gi|479325622|ref|YP_007865677.1|	-	0.11	11.8	0.3	0.11	11.8	0.2	2.3	3	0	0	3	3	3	0	Intrinsic	membrane	protein	PufX
DUF2116	PF09889.4	gi|479325622|ref|YP_007865677.1|	-	0.25	11.1	0.1	0.25	11.1	0.1	3.0	2	1	1	3	3	3	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
Fig1	PF12351.3	gi|479325622|ref|YP_007865677.1|	-	0.35	10.7	9.8	0.16	11.8	2.3	2.0	1	1	1	2	2	2	0	Ca2+	regulator	and	membrane	fusion	protein	Fig1
ABC2_membrane_5	PF13346.1	gi|479325622|ref|YP_007865677.1|	-	0.41	9.8	20.4	0.47	9.7	14.2	1.1	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|479325622|ref|YP_007865677.1|	-	1.3	8.1	20.0	1.7	7.7	13.8	1.1	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
HlyIII	PF03006.15	gi|479325622|ref|YP_007865677.1|	-	1.4	8.2	8.8	2.3	7.5	6.1	1.3	1	1	0	1	1	1	0	Haemolysin-III	related
GPI2	PF06432.6	gi|479325622|ref|YP_007865677.1|	-	2	7.6	5.3	2.3	7.4	3.3	1.3	1	1	0	1	1	1	0	Phosphatidylinositol	N-acetylglucosaminyltransferase
DUF3953	PF13129.1	gi|479325622|ref|YP_007865677.1|	-	2.1	8.0	16.3	0.04	13.5	2.5	2.9	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3953)
Tetraspannin	PF00335.15	gi|479325622|ref|YP_007865677.1|	-	3.6	6.8	19.4	6.7	5.9	13.4	1.4	1	1	0	1	1	1	0	Tetraspanin	family
E1-E2_ATPase	PF00122.15	gi|479325622|ref|YP_007865677.1|	-	5.8	5.8	11.1	1.3e+02	1.5	7.7	2.0	1	1	0	1	1	1	0	E1-E2	ATPase
zf-LITAF-like	PF10601.4	gi|479325622|ref|YP_007865677.1|	-	9.7	6.1	6.8	22	5.0	0.1	2.7	1	1	2	3	3	3	0	LITAF-like	zinc	ribbon	domain
Ala_racemase_C	PF00842.16	gi|479325623|ref|YP_007865678.1|	-	0.027	13.8	0.1	0.029	13.7	0.0	1.0	1	0	0	1	1	1	0	Alanine	racemase,	C-terminal	domain
DUF3990	PF13151.1	gi|479325623|ref|YP_007865678.1|	-	0.13	11.6	0.0	0.16	11.3	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3990)
MCM	PF00493.18	gi|479325624|ref|YP_007865679.1|	-	6.6e-135	449.1	0.2	1.2e-134	448.2	0.1	1.4	1	0	0	1	1	1	1	MCM2/3/5	family
MCM_N	PF14551.1	gi|479325624|ref|YP_007865679.1|	-	4.8e-23	81.9	5.1	4.9e-23	81.9	1.4	2.5	2	1	0	2	2	2	1	MCM	N-terminal	domain
AAA_5	PF07728.9	gi|479325624|ref|YP_007865679.1|	-	5.8e-08	32.5	0.0	1.4e-07	31.3	0.0	1.7	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
Mg_chelatase	PF01078.16	gi|479325624|ref|YP_007865679.1|	-	3e-07	29.8	0.1	0.00011	21.4	0.0	2.5	1	1	1	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_3	PF07726.6	gi|479325624|ref|YP_007865679.1|	-	2.8e-05	23.7	0.0	6e-05	22.6	0.0	1.5	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sigma54_activat	PF00158.21	gi|479325624|ref|YP_007865679.1|	-	5.8e-05	22.6	0.1	0.00031	20.2	0.1	2.1	1	1	0	1	1	1	1	Sigma-54	interaction	domain
Sld5	PF05916.6	gi|479325625|ref|YP_007865680.1|	-	7.1e-12	45.5	1.3	8.9e-12	45.2	0.9	1.1	1	0	0	1	1	1	1	GINS	complex	protein
DUF2018	PF09442.5	gi|479325625|ref|YP_007865680.1|	-	2.8	8.5	6.1	30	5.2	1.7	2.5	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF2018)
THUMP	PF02926.12	gi|479325626|ref|YP_007865681.1|	-	9.4e-17	61.2	1.3	1.1e-16	61.0	0.9	1.1	1	0	0	1	1	1	1	THUMP	domain
Cdc6_C	PF09079.6	gi|479325627|ref|YP_007865682.1|	-	6.4e-23	80.2	0.3	2e-22	78.7	0.2	1.8	1	0	0	1	1	1	1	CDC6,	C	terminal
AAA_22	PF13401.1	gi|479325627|ref|YP_007865682.1|	-	2.6e-14	53.4	0.2	1e-13	51.5	0.0	2.0	2	1	1	3	3	3	1	AAA	domain
Arch_ATPase	PF01637.13	gi|479325627|ref|YP_007865682.1|	-	2.9e-05	23.9	3.1	0.0014	18.3	0.2	3.0	2	1	1	3	3	3	1	Archaeal	ATPase
AAA_16	PF13191.1	gi|479325627|ref|YP_007865682.1|	-	5.2e-05	23.3	0.2	0.00028	20.9	0.1	2.4	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA	PF00004.24	gi|479325627|ref|YP_007865682.1|	-	0.00019	21.6	0.0	0.00057	20.0	0.0	1.8	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
NB-ARC	PF00931.17	gi|479325627|ref|YP_007865682.1|	-	0.0025	16.7	0.0	0.0049	15.7	0.0	1.4	1	0	0	1	1	1	1	NB-ARC	domain
ABC_tran	PF00005.22	gi|479325627|ref|YP_007865682.1|	-	0.0038	17.5	0.0	0.034	14.4	0.0	2.4	3	0	0	3	3	2	1	ABC	transporter
Miro	PF08477.8	gi|479325627|ref|YP_007865682.1|	-	0.0098	16.3	0.0	0.028	14.8	0.0	1.9	1	0	0	1	1	1	1	Miro-like	protein
AAA_17	PF13207.1	gi|479325627|ref|YP_007865682.1|	-	0.014	16.2	3.7	0.031	15.0	1.1	2.6	2	2	0	2	2	2	0	AAA	domain
AAA_25	PF13481.1	gi|479325627|ref|YP_007865682.1|	-	0.039	13.3	0.0	4.4	6.6	0.0	2.6	3	0	0	3	3	3	0	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|479325627|ref|YP_007865682.1|	-	0.047	13.1	0.0	0.17	11.3	0.0	1.9	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
AIG1	PF04548.11	gi|479325627|ref|YP_007865682.1|	-	0.064	12.3	0.0	0.17	10.9	0.0	1.7	1	0	0	1	1	1	0	AIG1	family
AAA_5	PF07728.9	gi|479325627|ref|YP_007865682.1|	-	0.11	12.2	0.3	3.9	7.2	0.0	3.1	3	1	0	3	3	3	0	AAA	domain	(dynein-related	subfamily)
AAA_19	PF13245.1	gi|479325627|ref|YP_007865682.1|	-	0.12	12.1	0.2	0.32	10.7	0.1	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
DUF87	PF01935.12	gi|479325627|ref|YP_007865682.1|	-	0.13	12.1	2.4	0.79	9.5	1.4	2.6	1	1	0	1	1	1	0	Domain	of	unknown	function	DUF87
TrmB	PF01978.14	gi|479325628|ref|YP_007865683.1|	-	7.2e-05	22.4	0.2	9.3e-05	22.0	0.2	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
SieB	PF14163.1	gi|479325628|ref|YP_007865683.1|	-	0.02	14.4	0.3	0.021	14.3	0.2	1.1	1	0	0	1	1	1	0	Superinfection	exclusion	protein	B
L51_S25_CI-B8	PF05047.11	gi|479325628|ref|YP_007865683.1|	-	0.096	12.4	0.1	0.19	11.4	0.0	1.5	1	0	0	1	1	1	0	Mitochondrial	ribosomal	protein	L51	/	S25	/	CI-B8	domain
HTH_45	PF14947.1	gi|479325628|ref|YP_007865683.1|	-	0.1	12.4	2.0	0.096	12.5	0.4	1.6	1	1	0	2	2	2	0	Winged	helix-turn-helix
HTH_24	PF13412.1	gi|479325628|ref|YP_007865683.1|	-	0.31	10.4	2.8	0.41	10.0	0.1	2.3	3	0	0	3	3	3	0	Winged	helix-turn-helix	DNA-binding
MoaC	PF01967.16	gi|479325629|ref|YP_007865684.1|	-	5.9e-49	165.2	3.6	6.6e-49	165.0	2.5	1.0	1	0	0	1	1	1	1	MoaC	family
AAA	PF00004.24	gi|479325630|ref|YP_007865685.1|	-	2e-14	53.9	0.0	3.5e-14	53.1	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Rad17	PF03215.10	gi|479325630|ref|YP_007865685.1|	-	9.2e-10	37.8	0.0	2.2e-06	26.6	0.0	2.4	2	0	0	2	2	2	2	Rad17	cell	cycle	checkpoint	protein
RuvB_N	PF05496.7	gi|479325630|ref|YP_007865685.1|	-	1.6e-09	37.1	0.0	4.2e-09	35.8	0.0	1.6	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_17	PF13207.1	gi|479325630|ref|YP_007865685.1|	-	2.7e-08	34.6	0.9	3.4e-07	31.0	0.6	3.0	1	1	0	1	1	1	1	AAA	domain
AAA_5	PF07728.9	gi|479325630|ref|YP_007865685.1|	-	8.4e-08	32.0	0.0	1.7e-07	31.0	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_14	PF13173.1	gi|479325630|ref|YP_007865685.1|	-	1.7e-07	31.1	0.0	4e-07	29.9	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|479325630|ref|YP_007865685.1|	-	2.5e-07	30.8	0.0	8.7e-06	25.9	0.0	2.6	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|479325630|ref|YP_007865685.1|	-	5.8e-07	29.6	0.0	9.8e-07	28.9	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
DUF815	PF05673.8	gi|479325630|ref|YP_007865685.1|	-	3.6e-06	26.1	0.0	7.7e-06	25.0	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
IstB_IS21	PF01695.12	gi|479325630|ref|YP_007865685.1|	-	9.2e-06	25.1	0.1	3.1e-05	23.4	0.0	1.9	2	1	0	2	2	1	1	IstB-like	ATP	binding	protein
TIP49	PF06068.8	gi|479325630|ref|YP_007865685.1|	-	1.4e-05	24.0	0.0	0.034	12.8	0.0	2.2	2	0	0	2	2	2	2	TIP49	C-terminus
AAA_18	PF13238.1	gi|479325630|ref|YP_007865685.1|	-	4.4e-05	23.7	0.1	0.00019	21.7	0.0	2.3	2	0	0	2	2	1	1	AAA	domain
NACHT	PF05729.7	gi|479325630|ref|YP_007865685.1|	-	0.00014	21.5	0.0	0.014	15.0	0.0	3.0	1	1	2	3	3	3	1	NACHT	domain
NB-ARC	PF00931.17	gi|479325630|ref|YP_007865685.1|	-	0.00021	20.2	0.0	0.00053	18.9	0.0	1.6	1	0	0	1	1	1	1	NB-ARC	domain
RNA_helicase	PF00910.17	gi|479325630|ref|YP_007865685.1|	-	0.0003	20.9	0.0	0.00083	19.4	0.0	1.8	1	0	0	1	1	1	1	RNA	helicase
AAA_33	PF13671.1	gi|479325630|ref|YP_007865685.1|	-	0.00034	20.5	0.0	0.00057	19.7	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_2	PF07724.9	gi|479325630|ref|YP_007865685.1|	-	0.00056	19.8	0.0	0.0015	18.4	0.0	1.6	2	0	0	2	2	1	1	AAA	domain	(Cdc48	subfamily)
AAA_19	PF13245.1	gi|479325630|ref|YP_007865685.1|	-	0.0011	18.6	0.0	0.0024	17.5	0.0	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_28	PF13521.1	gi|479325630|ref|YP_007865685.1|	-	0.0017	18.3	0.0	0.0049	16.8	0.0	1.7	2	0	0	2	2	1	1	AAA	domain
Zeta_toxin	PF06414.7	gi|479325630|ref|YP_007865685.1|	-	0.0041	16.2	0.0	0.0076	15.3	0.0	1.4	1	0	0	1	1	1	1	Zeta	toxin
Mg_chelatase	PF01078.16	gi|479325630|ref|YP_007865685.1|	-	0.0043	16.2	0.0	0.0064	15.6	0.0	1.3	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
DNA_pol3_delta	PF06144.8	gi|479325630|ref|YP_007865685.1|	-	0.0047	16.4	0.6	0.017	14.6	0.0	2.2	3	0	0	3	3	3	1	DNA	polymerase	III,	delta	subunit
DUF258	PF03193.11	gi|479325630|ref|YP_007865685.1|	-	0.0048	16.1	0.0	0.009	15.2	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
ABC_tran	PF00005.22	gi|479325630|ref|YP_007865685.1|	-	0.0074	16.5	0.0	0.036	14.3	0.0	2.0	2	0	0	2	2	2	1	ABC	transporter
AAA_23	PF13476.1	gi|479325630|ref|YP_007865685.1|	-	0.0078	16.5	0.3	0.43	10.8	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
AAA_25	PF13481.1	gi|479325630|ref|YP_007865685.1|	-	0.016	14.5	0.0	0.035	13.4	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
ArgK	PF03308.11	gi|479325630|ref|YP_007865685.1|	-	0.018	13.8	0.0	0.039	12.7	0.0	1.5	1	0	0	1	1	1	0	ArgK	protein
AAA_29	PF13555.1	gi|479325630|ref|YP_007865685.1|	-	0.019	14.5	0.0	0.044	13.3	0.0	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
Sigma54_activ_2	PF14532.1	gi|479325630|ref|YP_007865685.1|	-	0.019	15.0	0.0	0.046	13.7	0.0	1.6	1	1	0	1	1	1	0	Sigma-54	interaction	domain
NTPase_1	PF03266.10	gi|479325630|ref|YP_007865685.1|	-	0.024	14.3	0.0	0.23	11.1	0.0	2.1	2	0	0	2	2	2	0	NTPase
AAA_24	PF13479.1	gi|479325630|ref|YP_007865685.1|	-	0.024	14.2	0.0	0.047	13.2	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
MMR_HSR1	PF01926.18	gi|479325630|ref|YP_007865685.1|	-	0.026	14.4	0.0	0.069	13.1	0.0	1.8	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
Arch_ATPase	PF01637.13	gi|479325630|ref|YP_007865685.1|	-	0.027	14.1	0.0	0.11	12.1	0.0	2.0	1	1	0	1	1	1	0	Archaeal	ATPase
Sigma54_activat	PF00158.21	gi|479325630|ref|YP_007865685.1|	-	0.028	13.9	0.0	0.08	12.4	0.0	1.7	1	1	1	2	2	2	0	Sigma-54	interaction	domain
Parvo_NS1	PF01057.12	gi|479325630|ref|YP_007865685.1|	-	0.041	12.7	0.1	0.18	10.6	0.0	1.9	2	0	0	2	2	2	0	Parvovirus	non-structural	protein	NS1
AAA_3	PF07726.6	gi|479325630|ref|YP_007865685.1|	-	0.066	12.8	0.0	0.14	11.7	0.0	1.7	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
KaiC	PF06745.8	gi|479325630|ref|YP_007865685.1|	-	0.1	11.7	0.0	0.23	10.5	0.0	1.5	1	1	0	1	1	1	0	KaiC
SKI	PF01202.17	gi|479325630|ref|YP_007865685.1|	-	0.1	12.4	0.0	0.2	11.5	0.0	1.5	1	0	0	1	1	1	0	Shikimate	kinase
Rep_fac_C	PF08542.6	gi|479325631|ref|YP_007865686.1|	-	3.3e-24	84.6	1.9	5.6e-24	83.9	0.3	2.2	3	0	0	3	3	2	1	Replication	factor	C	C-terminal	domain
AAA	PF00004.24	gi|479325631|ref|YP_007865686.1|	-	3.5e-15	56.3	0.0	1.2e-14	54.6	0.0	1.9	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DNA_pol3_delta2	PF13177.1	gi|479325631|ref|YP_007865686.1|	-	3.6e-14	52.7	0.0	1.4e-11	44.3	0.0	2.5	1	1	0	1	1	1	1	DNA	polymerase	III,	delta	subunit
Rad17	PF03215.10	gi|479325631|ref|YP_007865686.1|	-	9.9e-08	31.1	0.0	0.00019	20.2	0.0	2.2	1	1	0	2	2	2	2	Rad17	cell	cycle	checkpoint	protein
RuvB_N	PF05496.7	gi|479325631|ref|YP_007865686.1|	-	1.4e-07	30.8	0.0	3.9e-07	29.3	0.0	1.8	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_14	PF13173.1	gi|479325631|ref|YP_007865686.1|	-	4.3e-07	29.8	0.1	2.6e-06	27.3	0.0	2.1	1	1	1	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|479325631|ref|YP_007865686.1|	-	2.8e-06	27.4	0.4	0.0041	17.2	0.1	3.0	2	1	0	2	2	2	1	AAA	domain
DNA_pol3_delta	PF06144.8	gi|479325631|ref|YP_007865686.1|	-	5.1e-06	26.1	0.8	0.0014	18.1	0.1	2.4	2	0	0	2	2	2	1	DNA	polymerase	III,	delta	subunit
AAA_16	PF13191.1	gi|479325631|ref|YP_007865686.1|	-	1.2e-05	25.3	0.0	0.0014	18.6	0.0	2.7	2	1	1	3	3	3	1	AAA	ATPase	domain
AAA_3	PF07726.6	gi|479325631|ref|YP_007865686.1|	-	1.2e-05	24.8	0.0	2.6e-05	23.8	0.0	1.5	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
TIP49	PF06068.8	gi|479325631|ref|YP_007865686.1|	-	2.6e-05	23.1	0.0	0.00045	19.0	0.0	2.3	1	1	0	1	1	1	1	TIP49	C-terminus
AAA_18	PF13238.1	gi|479325631|ref|YP_007865686.1|	-	6.7e-05	23.2	0.0	0.00028	21.1	0.0	2.1	2	0	0	2	2	1	1	AAA	domain
IstB_IS21	PF01695.12	gi|479325631|ref|YP_007865686.1|	-	0.00013	21.4	0.0	0.00032	20.1	0.0	1.7	2	0	0	2	2	1	1	IstB-like	ATP	binding	protein
AAA_19	PF13245.1	gi|479325631|ref|YP_007865686.1|	-	0.00014	21.5	0.0	0.00031	20.4	0.0	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
SNF2_N	PF00176.18	gi|479325631|ref|YP_007865686.1|	-	0.00018	20.4	0.0	0.45	9.2	0.0	2.1	1	1	1	2	2	2	2	SNF2	family	N-terminal	domain
Sigma54_activ_2	PF14532.1	gi|479325631|ref|YP_007865686.1|	-	0.00028	20.9	0.0	0.0014	18.6	0.0	2.1	1	1	0	1	1	1	1	Sigma-54	interaction	domain
Arch_ATPase	PF01637.13	gi|479325631|ref|YP_007865686.1|	-	0.00042	20.1	0.1	0.00086	19.0	0.1	1.6	1	1	0	1	1	1	1	Archaeal	ATPase
AAA_5	PF07728.9	gi|479325631|ref|YP_007865686.1|	-	0.0005	19.7	0.1	0.0049	16.5	0.0	2.7	2	1	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
ResIII	PF04851.10	gi|479325631|ref|YP_007865686.1|	-	0.0006	19.7	0.0	0.0033	17.2	0.0	2.1	2	1	0	3	3	2	1	Type	III	restriction	enzyme,	res	subunit
AAA_11	PF13086.1	gi|479325631|ref|YP_007865686.1|	-	0.00072	19.1	0.0	0.0011	18.6	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|479325631|ref|YP_007865686.1|	-	0.00084	18.8	0.0	0.0022	17.5	0.0	1.7	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
AAA_25	PF13481.1	gi|479325631|ref|YP_007865686.1|	-	0.0011	18.4	0.3	0.0054	16.1	0.1	2.2	2	1	0	2	2	2	1	AAA	domain
Mg_chelatase	PF01078.16	gi|479325631|ref|YP_007865686.1|	-	0.002	17.3	0.0	0.11	11.6	0.0	2.5	2	1	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
PhoH	PF02562.11	gi|479325631|ref|YP_007865686.1|	-	0.0025	17.0	0.0	0.24	10.6	0.0	2.5	2	0	0	2	2	2	1	PhoH-like	protein
T2SE	PF00437.15	gi|479325631|ref|YP_007865686.1|	-	0.0041	16.0	0.0	0.0096	14.8	0.0	1.6	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_17	PF13207.1	gi|479325631|ref|YP_007865686.1|	-	0.007	17.1	0.9	0.013	16.2	0.1	2.0	2	1	0	2	2	1	1	AAA	domain
DUF2075	PF09848.4	gi|479325631|ref|YP_007865686.1|	-	0.0074	15.2	0.1	0.053	12.4	0.1	2.0	1	1	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_10	PF12846.2	gi|479325631|ref|YP_007865686.1|	-	0.0088	15.5	0.2	0.59	9.5	0.0	2.7	1	1	1	3	3	3	1	AAA-like	domain
DUF815	PF05673.8	gi|479325631|ref|YP_007865686.1|	-	0.0094	14.8	0.0	0.02	13.8	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
Zeta_toxin	PF06414.7	gi|479325631|ref|YP_007865686.1|	-	0.019	14.1	0.0	0.049	12.7	0.0	1.7	1	0	0	1	1	1	0	Zeta	toxin
AAA_33	PF13671.1	gi|479325631|ref|YP_007865686.1|	-	0.022	14.6	0.2	0.056	13.3	0.1	2.0	1	1	0	1	1	1	0	AAA	domain
SseB_C	PF14581.1	gi|479325631|ref|YP_007865686.1|	-	0.022	14.5	0.0	0.08	12.8	0.0	1.9	1	0	0	1	1	1	0	SseB	protein	C-terminal	domain
DEAD	PF00270.24	gi|479325631|ref|YP_007865686.1|	-	0.023	14.1	0.8	5.6	6.4	0.0	2.9	2	2	2	4	4	4	0	DEAD/DEAH	box	helicase
DUF1548	PF07579.6	gi|479325631|ref|YP_007865686.1|	-	0.025	14.7	0.6	0.22	11.6	0.0	2.2	1	1	1	2	2	2	0	Domain	of	Unknown	Function	(DUF1548)
AAA_28	PF13521.1	gi|479325631|ref|YP_007865686.1|	-	0.038	13.9	0.0	0.088	12.7	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
Sigma54_activat	PF00158.21	gi|479325631|ref|YP_007865686.1|	-	0.051	13.0	0.0	1.3	8.5	0.0	2.4	2	0	0	2	2	2	0	Sigma-54	interaction	domain
Sec16_C	PF12931.2	gi|479325631|ref|YP_007865686.1|	-	0.051	13.3	0.1	0.1	12.3	0.0	1.5	2	0	0	2	2	1	0	Sec23-binding	domain	of	Sec16
KTI12	PF08433.5	gi|479325631|ref|YP_007865686.1|	-	0.059	12.5	0.0	0.12	11.5	0.0	1.5	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
AAA_30	PF13604.1	gi|479325631|ref|YP_007865686.1|	-	0.08	12.5	0.0	0.47	9.9	0.0	2.2	1	1	0	1	1	1	0	AAA	domain
Viral_helicase1	PF01443.13	gi|479325631|ref|YP_007865686.1|	-	0.087	12.3	0.0	0.15	11.5	0.0	1.4	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
PBP	PF01161.15	gi|479325632|ref|YP_007865687.1|	-	9.2e-37	126.1	0.1	1e-36	125.9	0.1	1.0	1	0	0	1	1	1	1	Phosphatidylethanolamine-binding	protein
Proteasome	PF00227.21	gi|479325633|ref|YP_007865688.1|	-	1.1e-49	168.2	0.6	1.3e-49	168.0	0.4	1.0	1	0	0	1	1	1	1	Proteasome	subunit
Amidase	PF01425.16	gi|479325634|ref|YP_007865689.1|	-	9e-87	291.7	0.0	1.3e-86	291.2	0.0	1.2	1	0	0	1	1	1	1	Amidase
DASH_Ask1	PF08655.5	gi|479325634|ref|YP_007865689.1|	-	0.073	12.9	0.0	0.17	11.6	0.0	1.6	1	0	0	1	1	1	0	DASH	complex	subunit	Ask1
ADH_N	PF08240.7	gi|479325635|ref|YP_007865690.1|	-	6.1e-27	93.5	0.1	1.2e-26	92.5	0.1	1.5	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|479325635|ref|YP_007865690.1|	-	2.7e-23	81.9	0.3	5.2e-23	81.0	0.2	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|479325635|ref|YP_007865690.1|	-	4e-13	50.3	0.1	9.2e-13	49.1	0.1	1.6	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
NAD_binding_10	PF13460.1	gi|479325635|ref|YP_007865690.1|	-	6.9e-05	22.9	0.7	0.00013	22.0	0.5	1.4	1	0	0	1	1	1	1	NADH(P)-binding
Eno-Rase_NADH_b	PF12242.3	gi|479325635|ref|YP_007865690.1|	-	9.9e-05	22.0	0.7	0.00026	20.6	0.5	1.7	1	0	0	1	1	1	1	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
CMAS	PF02353.15	gi|479325635|ref|YP_007865690.1|	-	0.00036	19.7	0.0	0.00056	19.0	0.0	1.2	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
ELFV_dehydrog	PF00208.16	gi|479325635|ref|YP_007865690.1|	-	0.0025	17.4	0.2	0.0041	16.7	0.2	1.3	1	0	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
AlaDh_PNT_C	PF01262.16	gi|479325635|ref|YP_007865690.1|	-	0.0031	17.0	0.4	0.0062	16.1	0.3	1.5	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
SIS_2	PF13580.1	gi|479325635|ref|YP_007865690.1|	-	0.016	14.9	0.3	0.027	14.1	0.2	1.5	1	1	0	1	1	1	0	SIS	domain
THF_DHG_CYH_C	PF02882.14	gi|479325635|ref|YP_007865690.1|	-	0.027	13.5	1.1	0.046	12.8	0.8	1.3	1	0	0	1	1	1	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
2-Hacid_dh_C	PF02826.14	gi|479325635|ref|YP_007865690.1|	-	0.028	13.5	0.3	0.048	12.8	0.2	1.3	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
CPSase_L_chain	PF00289.17	gi|479325635|ref|YP_007865690.1|	-	0.032	14.3	0.0	0.11	12.6	0.0	1.8	2	0	0	2	2	2	0	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
E1-N	PF14463.1	gi|479325635|ref|YP_007865690.1|	-	0.062	12.9	0.1	0.14	11.7	0.0	1.5	1	0	0	1	1	1	0	E1	N-terminal	domain
Microtub_assoc	PF07989.6	gi|479325637|ref|YP_007865692.1|	-	0.0022	17.7	2.3	0.019	14.7	0.0	2.2	2	0	0	2	2	2	2	Microtubule	associated
Beta-Casp	PF10996.3	gi|479325638|ref|YP_007865693.1|	-	1.7e-34	118.4	0.0	5.9e-34	116.7	0.0	2.0	1	0	0	1	1	1	1	Beta-Casp	domain
Lactamase_B	PF00753.22	gi|479325638|ref|YP_007865693.1|	-	4e-25	88.5	0.3	7.2e-25	87.7	0.2	1.4	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
RMMBL	PF07521.7	gi|479325638|ref|YP_007865693.1|	-	1.4e-13	50.4	0.9	1e-12	47.6	0.0	2.8	3	0	0	3	3	3	1	RNA-metabolising	metallo-beta-lactamase
Lactamase_B_2	PF12706.2	gi|479325638|ref|YP_007865693.1|	-	2e-12	47.0	0.0	4.8e-12	45.8	0.0	1.6	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|479325638|ref|YP_007865693.1|	-	0.00044	19.9	0.0	0.002	17.8	0.0	2.0	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
KH_2	PF07650.12	gi|479325638|ref|YP_007865693.1|	-	0.00045	19.7	0.6	0.00045	19.7	0.4	3.3	2	1	1	3	3	3	1	KH	domain
KH_1	PF00013.24	gi|479325638|ref|YP_007865693.1|	-	0.01	15.4	6.0	0.033	13.8	0.0	2.6	2	0	0	2	2	2	0	KH	domain
Fe-ADH_2	PF13685.1	gi|479325639|ref|YP_007865694.1|	-	1.2e-60	204.9	0.1	1.4e-60	204.6	0.0	1.1	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH	PF00465.14	gi|479325639|ref|YP_007865694.1|	-	1.1e-22	80.2	0.1	4.3e-22	78.2	0.1	1.7	1	1	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
DHQ_synthase	PF01761.15	gi|479325639|ref|YP_007865694.1|	-	5.8e-09	35.2	0.2	1.3e-07	30.8	0.1	2.5	1	1	0	1	1	1	1	3-dehydroquinate	synthase
FKBP_C	PF00254.23	gi|479325640|ref|YP_007865695.1|	-	1.6e-14	53.6	0.0	3.8e-14	52.4	0.0	1.7	1	0	0	1	1	1	1	FKBP-type	peptidyl-prolyl	cis-trans	isomerase
LSM	PF01423.17	gi|479325641|ref|YP_007865696.1|	-	4.5e-23	80.5	0.6	5.1e-23	80.4	0.4	1.0	1	0	0	1	1	1	1	LSM	domain
HNH_4	PF13395.1	gi|479325641|ref|YP_007865696.1|	-	0.067	12.8	0.6	3	7.5	0.1	2.2	1	1	1	2	2	2	0	HNH	endonuclease
Ribosomal_L37e	PF01907.14	gi|479325642|ref|YP_007865697.1|	-	8.8e-27	92.6	11.1	9.6e-27	92.5	7.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L37e
Stc1	PF12898.2	gi|479325642|ref|YP_007865697.1|	-	0.0019	18.2	0.6	0.0021	18.0	0.4	1.1	1	0	0	1	1	1	1	Stc1	domain
DZR	PF12773.2	gi|479325642|ref|YP_007865697.1|	-	0.0049	16.6	1.0	0.0058	16.4	0.7	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
NOB1_Zn_bind	PF08772.6	gi|479325642|ref|YP_007865697.1|	-	0.013	15.3	2.1	0.015	15.1	1.4	1.2	1	0	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
GCC2_GCC3	PF07699.8	gi|479325642|ref|YP_007865697.1|	-	0.015	14.8	1.5	0.021	14.3	1.1	1.3	1	0	0	1	1	1	0	GCC2	and	GCC3
zf-ribbon_3	PF13248.1	gi|479325642|ref|YP_007865697.1|	-	0.017	14.3	2.6	0.025	13.7	1.8	1.3	1	0	0	1	1	1	0	zinc-ribbon	domain
Cript	PF10235.4	gi|479325642|ref|YP_007865697.1|	-	0.066	13.5	2.1	0.086	13.2	1.4	1.2	1	0	0	1	1	1	0	Microtubule-associated	protein	CRIPT
HypA	PF01155.14	gi|479325642|ref|YP_007865697.1|	-	0.069	12.8	0.5	0.074	12.7	0.4	1.2	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
ASFV_p27	PF06556.6	gi|479325642|ref|YP_007865697.1|	-	0.1	12.4	0.4	0.12	12.3	0.2	1.1	1	0	0	1	1	1	0	IAP-like	protein	p27	C-terminus
OrfB_Zn_ribbon	PF07282.6	gi|479325642|ref|YP_007865697.1|	-	0.27	10.9	3.9	0.32	10.6	2.5	1.3	1	1	0	1	1	1	0	Putative	transposase	DNA-binding	domain
DUF2688	PF10892.3	gi|479325642|ref|YP_007865697.1|	-	0.31	10.7	3.2	0.49	10.1	2.2	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2688)
DNA_RNApol_7kD	PF03604.8	gi|479325642|ref|YP_007865697.1|	-	1	8.9	6.7	0.42	10.1	0.7	2.2	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Ribosomal_L32p	PF01783.18	gi|479325642|ref|YP_007865697.1|	-	1.1	9.4	9.5	1.2	9.3	5.1	2.0	1	1	1	2	2	2	0	Ribosomal	L32p	protein	family
DUF1660	PF07874.6	gi|479325642|ref|YP_007865697.1|	-	3.3	8.0	5.0	13	6.1	3.5	1.8	1	1	0	1	1	1	0	Prophage	protein	(DUF1660)
Spermine_synth	PF01564.12	gi|479325643|ref|YP_007865698.1|	-	4.2e-63	212.5	0.0	5.5e-63	212.1	0.0	1.1	1	0	0	1	1	1	1	Spermine/spermidine	synthase
Methyltransf_18	PF12847.2	gi|479325643|ref|YP_007865698.1|	-	1.2e-05	25.8	0.0	1.8e-05	25.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|479325643|ref|YP_007865698.1|	-	3.9e-05	24.0	0.0	6.6e-05	23.3	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|479325643|ref|YP_007865698.1|	-	0.00013	21.3	0.0	0.0002	20.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.1	gi|479325643|ref|YP_007865698.1|	-	0.00061	19.3	0.0	0.001	18.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_30	PF05430.6	gi|479325643|ref|YP_007865698.1|	-	0.0008	19.0	0.0	0.0018	17.9	0.0	1.6	1	1	0	1	1	1	1	S-adenosyl-L-methionine-dependent	methyltransferase
AAA_31	PF13614.1	gi|479325643|ref|YP_007865698.1|	-	0.013	15.4	0.0	0.024	14.5	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
Methyltransf_25	PF13649.1	gi|479325643|ref|YP_007865698.1|	-	0.02	15.2	0.0	0.044	14.1	0.0	1.6	1	1	0	1	1	1	0	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|479325643|ref|YP_007865698.1|	-	0.022	14.7	0.0	0.034	14.1	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
DUF43	PF01861.11	gi|479325643|ref|YP_007865698.1|	-	0.026	13.5	0.2	0.057	12.3	0.1	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	DUF43
MCR_D	PF02505.9	gi|479325643|ref|YP_007865698.1|	-	0.036	13.6	0.4	0.07	12.7	0.3	1.4	1	0	0	1	1	1	0	Methyl-coenzyme	M	reductase	operon	protein	D
Methyltransf_5	PF01795.14	gi|479325643|ref|YP_007865698.1|	-	0.14	11.3	0.0	0.22	10.7	0.0	1.2	1	0	0	1	1	1	0	MraW	methylase	family
AdoHcyase	PF05221.12	gi|479325644|ref|YP_007865699.1|	-	5.1e-74	248.6	0.5	5.7e-74	248.4	0.3	1.0	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase
AdoHcyase_NAD	PF00670.16	gi|479325644|ref|YP_007865699.1|	-	1.6e-62	210.1	1.0	2.7e-62	209.3	0.7	1.4	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
IlvN	PF07991.7	gi|479325644|ref|YP_007865699.1|	-	1.5e-07	30.9	0.2	3e-07	29.9	0.1	1.4	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
2-Hacid_dh_C	PF02826.14	gi|479325644|ref|YP_007865699.1|	-	2.1e-07	30.2	0.3	4.7e-07	29.1	0.2	1.5	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
TrkA_N	PF02254.13	gi|479325644|ref|YP_007865699.1|	-	0.004	17.1	0.1	0.0085	16.0	0.1	1.6	1	0	0	1	1	1	1	TrkA-N	domain
P_gingi_FimA	PF06321.6	gi|479325644|ref|YP_007865699.1|	-	0.0066	15.6	0.1	0.02	14.0	0.0	1.8	2	0	0	2	2	2	1	Major	fimbrial	subunit	protein	(FimA)
DUF2120	PF09893.4	gi|479325644|ref|YP_007865699.1|	-	0.043	13.7	0.7	0.15	11.9	0.0	2.2	3	0	0	3	3	3	0	Uncharacterized	protein	conserved	in	archaea	(DUF2120)
FlhE	PF06366.8	gi|479325644|ref|YP_007865699.1|	-	0.054	13.3	0.0	0.12	12.2	0.0	1.5	1	0	0	1	1	1	0	Flagellar	protein	FlhE
DUF3568	PF12092.3	gi|479325647|ref|YP_007865702.1|	-	0.033	13.9	0.1	0.036	13.7	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3568)
Nbl1_Borealin_N	PF10444.4	gi|479325647|ref|YP_007865702.1|	-	0.11	11.8	0.2	0.16	11.3	0.2	1.2	1	0	0	1	1	1	0	Nbl1	/	Borealin	N	terminal
Ribosomal_L21e	PF01157.13	gi|479325648|ref|YP_007865703.1|	-	3.3e-26	90.9	0.9	3.9e-26	90.7	0.6	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L21e
Prosystemin	PF07376.6	gi|479325648|ref|YP_007865703.1|	-	0.032	13.6	0.1	0.068	12.5	0.0	1.5	1	1	1	2	2	2	0	Prosystemin
DUF104	PF01954.11	gi|479325648|ref|YP_007865703.1|	-	0.21	11.6	0.9	0.82	9.7	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF104
RNA_pol_Rpb4	PF03874.11	gi|479325649|ref|YP_007865704.1|	-	1.5e-13	50.7	0.5	1.7e-13	50.5	0.4	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb4
DDE_3	PF13358.1	gi|479325649|ref|YP_007865704.1|	-	0.0034	17.1	0.0	0.0037	17.0	0.0	1.2	1	0	0	1	1	1	1	DDE	superfamily	endonuclease
UTRA	PF07702.8	gi|479325649|ref|YP_007865704.1|	-	0.0074	15.8	0.1	0.01	15.4	0.0	1.3	1	1	0	1	1	1	1	UTRA	domain
DUF655	PF04919.7	gi|479325650|ref|YP_007865705.1|	-	9.4e-63	211.1	2.4	1.1e-62	210.9	1.7	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF655)
HHH_6	PF14579.1	gi|479325650|ref|YP_007865705.1|	-	0.00086	19.2	0.1	0.0025	17.7	0.0	1.8	1	1	1	2	2	2	1	Helix-hairpin-helix	motif
HHH_3	PF12836.2	gi|479325650|ref|YP_007865705.1|	-	0.038	13.9	0.3	0.076	12.9	0.1	1.7	2	0	0	2	2	2	0	Helix-hairpin-helix	motif
RrnaAD	PF00398.15	gi|479325651|ref|YP_007865706.1|	-	2.9e-12	46.1	0.0	3.2e-12	46.0	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
MTS	PF05175.9	gi|479325652|ref|YP_007865707.1|	-	6e-07	28.9	0.0	2.5e-06	27.0	0.0	1.7	1	1	1	2	2	2	1	Methyltransferase	small	domain
Methyltransf_26	PF13659.1	gi|479325652|ref|YP_007865707.1|	-	3.4e-06	27.0	0.0	4e-06	26.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|479325652|ref|YP_007865707.1|	-	0.0025	17.0	0.0	0.0034	16.5	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
RepA_N	PF06970.6	gi|479325652|ref|YP_007865707.1|	-	0.029	14.1	0.2	0.05	13.4	0.1	1.4	1	0	0	1	1	1	0	Replication	initiator	protein	A	(RepA)	N-terminus
SpoU_methylase	PF00588.14	gi|479325653|ref|YP_007865708.1|	-	3.4e-33	114.4	0.0	5.5e-33	113.8	0.0	1.3	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
Methyltrn_RNA_4	PF09936.4	gi|479325653|ref|YP_007865708.1|	-	5.9e-05	22.6	0.0	0.0026	17.2	0.0	2.2	1	1	0	1	1	1	1	SAM-dependent	RNA	methyltransferase
Ribosomal_S3Ae	PF01015.13	gi|479325654|ref|YP_007865709.1|	-	1.2e-74	249.8	2.8	1.3e-74	249.7	2.0	1.0	1	0	0	1	1	1	1	Ribosomal	S3Ae	family
P63C	PF10546.4	gi|479325654|ref|YP_007865709.1|	-	0.031	14.2	0.1	0.14	12.0	0.0	2.1	2	1	0	2	2	2	0	P63C	domain
Transglut_i_TM	PF14400.1	gi|479325654|ref|YP_007865709.1|	-	0.12	11.8	0.0	0.17	11.4	0.0	1.3	1	0	0	1	1	1	0	Inactive	transglutaminase	fused	to	7	transmembrane	helices
NTP_transferase	PF00483.18	gi|479325655|ref|YP_007865710.1|	-	1.3e-36	126.1	0.0	1.8e-36	125.7	0.0	1.2	1	0	0	1	1	1	1	Nucleotidyl	transferase
Hexapep	PF00132.19	gi|479325655|ref|YP_007865710.1|	-	7.8e-21	72.5	25.4	9e-09	34.4	0.6	4.9	4	1	1	5	5	5	4	Bacterial	transferase	hexapeptide	(six	repeats)
NTP_transf_3	PF12804.2	gi|479325655|ref|YP_007865710.1|	-	2e-15	57.2	0.0	2.7e-15	56.7	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep_2	PF14602.1	gi|479325655|ref|YP_007865710.1|	-	3.5e-08	32.8	7.3	0.00017	21.0	0.0	3.9	3	0	0	3	3	3	3	Hexapeptide	repeat	of	succinyl-transferase
IspD	PF01128.14	gi|479325655|ref|YP_007865710.1|	-	6.6e-07	29.0	0.1	3.9e-05	23.2	0.0	2.1	2	0	0	2	2	2	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
NTP_transf_4	PF13562.1	gi|479325655|ref|YP_007865710.1|	-	0.12	12.0	0.1	7.9	6.0	0.0	3.1	2	1	0	2	2	2	0	Sugar	nucleotidyl	transferase
MMR_HSR1_C	PF08438.5	gi|479325656|ref|YP_007865711.1|	-	3.3e-37	127.0	0.1	5.7e-37	126.2	0.1	1.4	1	0	0	1	1	1	1	GTPase	of	unknown	function	C-terminal
MMR_HSR1	PF01926.18	gi|479325656|ref|YP_007865711.1|	-	6e-19	68.1	0.0	5.3e-18	65.0	0.0	2.4	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
TGS	PF02824.16	gi|479325656|ref|YP_007865711.1|	-	2.5e-16	59.2	0.0	5.2e-16	58.2	0.0	1.5	1	0	0	1	1	1	1	TGS	domain
FeoB_N	PF02421.13	gi|479325656|ref|YP_007865711.1|	-	1e-06	28.1	1.6	0.00021	20.6	0.1	2.8	3	0	0	3	3	3	2	Ferrous	iron	transport	protein	B
GTP_EFTU	PF00009.22	gi|479325656|ref|YP_007865711.1|	-	0.0019	17.6	1.4	1.6	8.0	0.0	3.0	2	1	0	2	2	2	2	Elongation	factor	Tu	GTP	binding	domain
YchF-GTPase_C	PF06071.8	gi|479325656|ref|YP_007865711.1|	-	0.024	14.4	0.1	0.9	9.3	0.0	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF933)
Sec3_C	PF09763.4	gi|479325656|ref|YP_007865711.1|	-	0.05	11.7	0.9	0.066	11.3	0.6	1.1	1	0	0	1	1	1	0	Exocyst	complex	component	Sec3
Miro	PF08477.8	gi|479325656|ref|YP_007865711.1|	-	0.092	13.2	0.1	0.74	10.3	0.0	2.5	2	1	0	2	2	2	0	Miro-like	protein
Ribosomal_L15e	PF00827.12	gi|479325657|ref|YP_007865712.1|	-	1.5e-76	256.2	8.1	1.9e-76	255.8	5.6	1.1	1	0	0	1	1	1	1	Ribosomal	L15
RNA_binding	PF01877.12	gi|479325658|ref|YP_007865713.1|	-	1.2e-27	96.2	0.6	1.7e-27	95.8	0.4	1.2	1	0	0	1	1	1	1	RNA	binding
RNase_P_p30	PF01876.11	gi|479325659|ref|YP_007865714.1|	-	3.2e-20	71.9	0.3	1.6e-19	69.5	0.2	1.8	1	1	0	1	1	1	1	RNase	P	subunit	p30
DUF3906	PF13046.1	gi|479325659|ref|YP_007865714.1|	-	0.092	12.3	0.1	1.4	8.5	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3906)
RNase_P_Rpp14	PF01900.14	gi|479325660|ref|YP_007865715.1|	-	5.5e-18	64.8	0.0	8.3e-18	64.2	0.0	1.2	1	0	0	1	1	1	1	Rpp14/Pop5	family
TCR_zetazeta	PF11628.3	gi|479325660|ref|YP_007865715.1|	-	0.0013	18.1	3.9	0.0024	17.2	2.7	1.4	1	0	0	1	1	1	1	T-cell	surface	glycoprotein	CD3	zeta	chain
Proteasome	PF00227.21	gi|479325661|ref|YP_007865716.1|	-	5.4e-63	211.7	0.1	7.5e-63	211.2	0.0	1.2	1	0	0	1	1	1	1	Proteasome	subunit
Proteasome_A_N	PF10584.4	gi|479325661|ref|YP_007865716.1|	-	5.6e-13	47.9	1.1	1.1e-12	46.9	0.3	1.9	2	0	0	2	2	2	1	Proteasome	subunit	A	N-terminal	signature
SBDS	PF01172.13	gi|479325662|ref|YP_007865717.1|	-	9.6e-29	99.0	0.1	1.9e-28	98.0	0.1	1.5	1	0	0	1	1	1	1	Shwachman-Bodian-Diamond	syndrome	(SBDS)	protein
SBDS_C	PF09377.5	gi|479325662|ref|YP_007865717.1|	-	8e-22	77.2	1.4	1.1e-21	76.7	1.0	1.2	1	0	0	1	1	1	1	SBDS	protein	C-terminal	domain
EFG_C	PF00679.19	gi|479325662|ref|YP_007865717.1|	-	0.017	15.0	0.0	0.042	13.7	0.0	1.6	1	0	0	1	1	1	0	Elongation	factor	G	C-terminus
UPF0262	PF06793.7	gi|479325662|ref|YP_007865717.1|	-	0.032	13.9	0.2	0.048	13.3	0.1	1.3	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0262)
DUF1949	PF09186.6	gi|479325662|ref|YP_007865717.1|	-	0.098	12.2	1.1	0.48	10.0	0.0	2.6	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF1949)
KH_1	PF00013.24	gi|479325663|ref|YP_007865718.1|	-	3.5e-05	23.3	0.2	0.0002	20.9	0.1	2.3	1	1	1	2	2	2	1	KH	domain
S1	PF00575.18	gi|479325663|ref|YP_007865718.1|	-	6.8e-05	22.8	0.5	0.00012	22.0	0.1	1.7	2	0	0	2	2	2	1	S1	RNA	binding	domain
LicD	PF04991.8	gi|479325663|ref|YP_007865718.1|	-	0.005	16.9	0.1	0.0091	16.1	0.0	1.4	2	0	0	2	2	2	1	LicD	family
NotI	PF12183.3	gi|479325663|ref|YP_007865718.1|	-	0.03	13.3	0.0	0.051	12.6	0.0	1.3	1	0	0	1	1	1	0	Restriction	endonuclease	NotI
RNase_PH	PF01138.16	gi|479325664|ref|YP_007865719.1|	-	1.4e-34	119.2	0.0	1.8e-34	118.8	0.0	1.1	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.10	gi|479325664|ref|YP_007865719.1|	-	1.6e-14	53.5	0.0	3e-14	52.6	0.0	1.5	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	2
DUF4192	PF13830.1	gi|479325664|ref|YP_007865719.1|	-	0.012	15.2	0.3	0.017	14.8	0.2	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4192)
RNase_PH	PF01138.16	gi|479325665|ref|YP_007865720.1|	-	2.1e-28	99.2	0.0	3.1e-28	98.7	0.0	1.3	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.10	gi|479325665|ref|YP_007865720.1|	-	7.6e-11	41.7	0.1	2.2e-10	40.3	0.0	1.8	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	2
Ribosomal_L37ae	PF01780.14	gi|479325666|ref|YP_007865721.1|	-	5.9e-25	86.9	6.2	6.2e-25	86.8	4.3	1.0	1	0	0	1	1	1	1	Ribosomal	L37ae	protein	family
Zn_Tnp_IS1595	PF12760.2	gi|479325666|ref|YP_007865721.1|	-	0.00027	20.7	4.4	0.00034	20.3	3.0	1.4	1	1	0	1	1	1	1	Transposase	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|479325666|ref|YP_007865721.1|	-	0.0049	16.5	0.8	0.006	16.2	0.5	1.2	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Rep_fac-A_C	PF08646.5	gi|479325666|ref|YP_007865721.1|	-	0.01	15.5	2.0	0.013	15.2	1.4	1.2	1	0	0	1	1	1	0	Replication	factor-A	C	terminal	domain
zf-C3HC4_2	PF13923.1	gi|479325666|ref|YP_007865721.1|	-	0.016	15.2	1.1	4.5	7.3	0.0	2.1	2	0	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
Endonuclease_7	PF02945.10	gi|479325666|ref|YP_007865721.1|	-	0.041	13.5	2.9	0.067	12.8	0.1	2.0	1	1	1	2	2	2	0	Recombination	endonuclease	VII
HMG_CoA_synt_C	PF08540.5	gi|479325666|ref|YP_007865721.1|	-	0.043	13.2	0.0	0.045	13.2	0.0	1.0	1	0	0	1	1	1	0	Hydroxymethylglutaryl-coenzyme	A	synthase	C	terminal
zf-TFIIB	PF13453.1	gi|479325666|ref|YP_007865721.1|	-	0.077	12.2	0.4	0.14	11.4	0.3	1.4	1	0	0	1	1	1	0	Transcription	factor	zinc-finger
DnaJ_CXXCXGXG	PF00684.14	gi|479325666|ref|YP_007865721.1|	-	0.12	12.4	2.0	0.19	11.8	1.4	1.4	1	1	0	1	1	1	0	DnaJ	central	domain
CpXC	PF14353.1	gi|479325666|ref|YP_007865721.1|	-	0.14	12.1	1.5	0.18	11.7	0.3	1.6	1	1	1	2	2	2	0	CpXC	protein
DUF4379	PF14311.1	gi|479325666|ref|YP_007865721.1|	-	0.16	11.7	8.2	0.58	10.0	0.3	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4379)
A2L_zn_ribbon	PF08792.5	gi|479325666|ref|YP_007865721.1|	-	0.19	11.2	3.3	0.33	10.4	2.3	1.4	1	1	0	1	1	1	0	A2L	zinc	ribbon	domain
zf-RING_2	PF13639.1	gi|479325666|ref|YP_007865721.1|	-	0.29	11.0	1.7	8	6.3	1.8	2.0	1	1	1	2	2	2	0	Ring	finger	domain
zf-H2C2_2	PF13465.1	gi|479325666|ref|YP_007865721.1|	-	0.41	11.0	4.3	1.2	9.5	0.3	2.2	2	0	0	2	2	2	0	Zinc-finger	double	domain
zf-C2H2_4	PF13894.1	gi|479325666|ref|YP_007865721.1|	-	0.65	10.4	2.9	18	5.9	0.1	2.3	2	0	0	2	2	2	0	C2H2-type	zinc	finger
zf-C3HC4_3	PF13920.1	gi|479325666|ref|YP_007865721.1|	-	1.3	8.8	3.8	2.5	7.8	0.3	2.0	1	1	1	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
TFIIS_C	PF01096.13	gi|479325666|ref|YP_007865721.1|	-	8.5	6.1	7.7	23	4.7	0.1	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
Brix	PF04427.13	gi|479325667|ref|YP_007865722.1|	-	1.2e-12	47.9	0.3	1.5e-12	47.6	0.2	1.2	1	0	0	1	1	1	1	Brix	domain
Prefoldin_2	PF01920.15	gi|479325668|ref|YP_007865723.1|	-	4e-26	90.8	16.1	4.5e-26	90.6	11.2	1.0	1	0	0	1	1	1	1	Prefoldin	subunit
TelA	PF05816.6	gi|479325668|ref|YP_007865723.1|	-	0.0066	15.1	9.3	0.008	14.9	6.5	1.1	1	0	0	1	1	1	1	Toxic	anion	resistance	protein	(TelA)
Cortex-I_coil	PF09304.5	gi|479325668|ref|YP_007865723.1|	-	0.0077	16.2	12.0	0.0079	16.2	2.6	2.1	2	0	0	2	2	2	1	Cortexillin	I,	coiled	coil
MerR-DNA-bind	PF09278.6	gi|479325668|ref|YP_007865723.1|	-	0.013	15.8	10.6	0.067	13.5	1.4	2.8	3	0	0	3	3	3	0	MerR,	DNA	binding
UBN2	PF14223.1	gi|479325668|ref|YP_007865723.1|	-	0.014	15.1	7.2	0.06	13.1	1.2	2.1	1	1	1	2	2	2	0	gag-polypeptide	of	LTR	copia-type
WXG100	PF06013.7	gi|479325668|ref|YP_007865723.1|	-	0.027	14.4	1.8	2.3	8.2	0.0	2.3	2	0	0	2	2	2	0	Proteins	of	100	residues	with	WXG
Baculo_PEP_C	PF04513.7	gi|479325668|ref|YP_007865723.1|	-	0.028	14.2	7.2	0.14	12.0	2.2	2.1	1	1	1	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Stimulus_sens_1	PF13756.1	gi|479325668|ref|YP_007865723.1|	-	0.031	14.6	0.1	0.39	11.1	0.0	2.4	1	1	1	2	2	2	0	Stimulus-sensing	domain
TrbM	PF07424.6	gi|479325668|ref|YP_007865723.1|	-	0.043	13.7	0.8	0.067	13.1	0.6	1.3	1	1	0	1	1	1	0	TrbM
Flag1_repress	PF03614.8	gi|479325668|ref|YP_007865723.1|	-	0.045	13.3	0.4	0.055	13.0	0.3	1.1	1	0	0	1	1	1	0	Repressor	of	phase-1	flagellin
DUF3993	PF13158.1	gi|479325668|ref|YP_007865723.1|	-	0.061	13.1	0.1	0.1	12.3	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3993)
NPV_P10	PF05531.7	gi|479325668|ref|YP_007865723.1|	-	0.075	13.2	7.3	0.077	13.2	1.2	2.4	1	1	0	2	2	2	0	Nucleopolyhedrovirus	P10	protein
DUF424	PF04242.8	gi|479325668|ref|YP_007865723.1|	-	0.11	12.5	1.3	0.39	10.8	0.5	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF424)
SAS4	PF15460.1	gi|479325668|ref|YP_007865723.1|	-	0.11	12.3	5.0	1.3	8.8	2.1	2.5	1	1	1	2	2	2	0	Something	about	silencing,	SAS,	complex	subunit	4
RNR_N	PF08343.5	gi|479325668|ref|YP_007865723.1|	-	0.14	11.9	1.4	11	5.9	0.1	2.6	1	1	1	2	2	2	0	Ribonucleotide	reductase	N-terminal
DUF3355	PF11835.3	gi|479325668|ref|YP_007865723.1|	-	0.2	11.4	1.2	7.6	6.3	0.3	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3355)
Mga	PF05043.8	gi|479325668|ref|YP_007865723.1|	-	0.23	11.7	2.9	0.3	11.3	0.3	2.2	1	1	1	2	2	2	0	Mga	helix-turn-helix	domain
CDC37_C	PF08564.5	gi|479325668|ref|YP_007865723.1|	-	0.53	10.1	4.8	0.81	9.5	2.3	2.1	1	1	1	2	2	2	0	Cdc37	C	terminal	domain
Gon7	PF08738.5	gi|479325668|ref|YP_007865723.1|	-	0.58	10.1	5.8	0.25	11.3	1.6	2.1	2	1	0	2	2	2	0	Gon7	family
Filament	PF00038.16	gi|479325668|ref|YP_007865723.1|	-	0.59	9.5	12.1	2	7.8	0.8	2.0	1	1	1	2	2	2	0	Intermediate	filament	protein
TEX12	PF15219.1	gi|479325668|ref|YP_007865723.1|	-	0.6	10.1	4.9	6.2	6.8	0.2	2.5	1	1	2	3	3	3	0	Testis-expressed	12
CDC37_N	PF03234.9	gi|479325668|ref|YP_007865723.1|	-	0.82	9.9	6.2	4.1	7.7	4.3	1.8	1	1	0	1	1	1	0	Cdc37	N	terminal	kinase	binding
TPR_MLP1_2	PF07926.7	gi|479325668|ref|YP_007865723.1|	-	0.9	9.2	13.7	1.8	8.3	0.9	2.1	2	0	0	2	2	2	0	TPR/MLP1/MLP2-like	protein
UPF0449	PF15136.1	gi|479325668|ref|YP_007865723.1|	-	0.93	9.7	5.5	0.33	11.1	1.3	1.8	1	1	1	2	2	2	0	Uncharacterised	protein	family	UPF0449
Imm3	PF14425.1	gi|479325668|ref|YP_007865723.1|	-	0.95	9.4	9.4	0.42	10.5	1.2	2.0	1	1	1	2	2	2	0	Immunity	protein	Imm3
U1snRNP70_N	PF12220.3	gi|479325668|ref|YP_007865723.1|	-	0.98	9.7	6.3	7	7.0	0.7	2.1	1	1	1	2	2	2	0	U1	small	nuclear	ribonucleoprotein	of	70kDa	MW	N	terminal
OmpH	PF03938.9	gi|479325668|ref|YP_007865723.1|	-	1.3	8.9	9.2	3.2	7.6	6.4	1.6	1	1	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
Zein-binding	PF04576.10	gi|479325668|ref|YP_007865723.1|	-	1.9	8.6	7.5	7.3	6.7	0.1	2.2	1	1	1	2	2	2	0	Zein-binding
DUF4200	PF13863.1	gi|479325668|ref|YP_007865723.1|	-	2.1	8.3	11.3	2.5	8.0	3.5	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4200)
Prefoldin	PF02996.12	gi|479325668|ref|YP_007865723.1|	-	2.3	7.8	11.9	1.2	8.8	2.6	2.3	1	1	1	2	2	2	0	Prefoldin	subunit
FlxA	PF14282.1	gi|479325668|ref|YP_007865723.1|	-	3.5	7.6	10.5	0.34	10.8	0.8	2.5	2	1	1	3	3	3	0	FlxA-like	protein
Spc7	PF08317.6	gi|479325668|ref|YP_007865723.1|	-	3.6	6.1	12.8	4.6	5.8	8.9	1.1	1	0	0	1	1	1	0	Spc7	kinetochore	protein
DUF972	PF06156.8	gi|479325668|ref|YP_007865723.1|	-	3.7	7.9	9.9	87	3.5	6.8	2.1	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF972)
FTA4	PF13093.1	gi|479325668|ref|YP_007865723.1|	-	3.8	6.8	10.3	0.83	9.0	3.6	1.9	1	1	1	2	2	2	0	Kinetochore	complex	Fta4	of	Sim4	subunit,	or	CENP-50
DUF2203	PF09969.4	gi|479325668|ref|YP_007865723.1|	-	4.6	7.4	5.7	97	3.2	3.9	2.1	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2203)
Syntaxin-6_N	PF09177.6	gi|479325668|ref|YP_007865723.1|	-	4.6	7.7	8.9	7.3	7.0	0.7	2.2	1	1	1	2	2	2	0	Syntaxin	6,	N-terminal
DUF4140	PF13600.1	gi|479325668|ref|YP_007865723.1|	-	5.3	7.5	10.4	1.8	9.0	1.0	2.3	1	1	1	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
XkdW	PF09636.5	gi|479325668|ref|YP_007865723.1|	-	7.7	6.4	6.9	3.3	7.6	0.5	2.2	2	0	0	2	2	2	0	XkdW	protein
XhlA	PF10779.4	gi|479325668|ref|YP_007865723.1|	-	8.2	6.4	11.4	6.7e+02	0.2	7.9	2.2	1	1	0	1	1	1	0	Haemolysin	XhlA
ERCC4	PF02732.10	gi|479325669|ref|YP_007865724.1|	-	3.8e-28	98.0	0.2	6e-28	97.4	0.1	1.3	1	0	0	1	1	1	1	ERCC4	domain
HHH_2	PF12826.2	gi|479325669|ref|YP_007865724.1|	-	0.00039	20.2	0.0	0.001	18.8	0.0	1.7	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
DUF3641	PF12345.3	gi|479325669|ref|YP_007865724.1|	-	0.043	13.6	0.0	0.11	12.3	0.0	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3641)
HHH_5	PF14520.1	gi|479325669|ref|YP_007865724.1|	-	0.11	12.7	0.1	0.44	10.7	0.0	2.1	3	0	0	3	3	3	0	Helix-hairpin-helix	domain
GTP_EFTU	PF00009.22	gi|479325670|ref|YP_007865725.1|	-	1.5e-57	194.1	0.1	2.4e-57	193.4	0.0	1.3	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
EFG_IV	PF03764.13	gi|479325670|ref|YP_007865725.1|	-	1.4e-31	108.5	0.0	8.9e-31	105.9	0.0	2.4	3	0	0	3	3	3	1	Elongation	factor	G,	domain	IV
EFG_II	PF14492.1	gi|479325670|ref|YP_007865725.1|	-	2.6e-23	81.6	0.0	6.5e-23	80.3	0.0	1.7	1	0	0	1	1	1	1	Elongation	Factor	G,	domain	II
EFG_C	PF00679.19	gi|479325670|ref|YP_007865725.1|	-	7.8e-22	76.9	0.0	2.2e-21	75.4	0.0	1.9	1	0	0	1	1	1	1	Elongation	factor	G	C-terminus
GTP_EFTU_D2	PF03144.20	gi|479325670|ref|YP_007865725.1|	-	6.2e-12	45.4	0.7	3.3e-11	43.1	0.0	2.6	3	0	0	3	3	3	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.18	gi|479325670|ref|YP_007865725.1|	-	0.00029	20.7	0.1	0.00099	19.0	0.1	1.9	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
HAD_2	PF13419.1	gi|479325671|ref|YP_007865726.1|	-	3.8e-26	92.3	0.0	4.7e-26	92.0	0.0	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|479325671|ref|YP_007865726.1|	-	1.2e-11	45.4	0.0	1.7e-11	44.9	0.0	1.2	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|479325671|ref|YP_007865726.1|	-	2.9e-08	33.2	0.0	5.2e-08	32.4	0.0	1.4	1	0	0	1	1	1	1	HAD-hyrolase-like
HAD	PF12710.2	gi|479325671|ref|YP_007865726.1|	-	0.00061	19.9	0.7	0.0017	18.5	0.5	1.8	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_6	PF13344.1	gi|479325671|ref|YP_007865726.1|	-	0.0063	16.3	0.0	0.09	12.6	0.0	2.3	2	0	0	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
Peptidase_M28	PF04389.12	gi|479325672|ref|YP_007865727.1|	-	5.2e-07	29.5	0.0	2e-06	27.6	0.0	1.9	1	1	0	1	1	1	1	Peptidase	family	M28
Apolipoprotein	PF01442.13	gi|479325672|ref|YP_007865727.1|	-	0.11	12.0	0.1	0.18	11.3	0.1	1.2	1	0	0	1	1	1	0	Apolipoprotein	A1/A4/E	domain
DUF1125	PF06563.6	gi|479325672|ref|YP_007865727.1|	-	0.28	10.9	6.4	7.3	6.3	0.0	3.5	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF1125)
DUF447	PF04289.7	gi|479325673|ref|YP_007865728.1|	-	2.3e-34	118.4	0.1	2.6e-34	118.2	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF447)
Iso_dh	PF00180.15	gi|479325674|ref|YP_007865729.1|	-	2.8e-93	312.6	1.5	3.2e-93	312.4	1.0	1.0	1	0	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
PdxA	PF04166.7	gi|479325674|ref|YP_007865729.1|	-	0.0095	15.1	0.0	0.017	14.3	0.0	1.4	1	0	0	1	1	1	1	Pyridoxal	phosphate	biosynthetic	protein	PdxA
tRNA-synt_1	PF00133.17	gi|479325675|ref|YP_007865730.1|	-	2.7e-169	564.0	0.8	3.7e-169	563.5	0.6	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|479325675|ref|YP_007865730.1|	-	4.9e-26	91.3	4.7	1.1e-25	90.1	3.3	1.6	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.6	gi|479325675|ref|YP_007865730.1|	-	6.6e-18	64.5	1.4	3.4e-06	25.9	0.0	4.4	3	1	0	3	3	3	3	tRNA	synthetases	class	I	(M)
Rpr2	PF04032.11	gi|479325675|ref|YP_007865730.1|	-	0.00089	19.0	2.1	0.0029	17.4	0.1	2.8	3	0	0	3	3	3	1	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
tRNA-synt_1_2	PF13603.1	gi|479325675|ref|YP_007865730.1|	-	0.0019	17.5	0.6	0.0058	15.9	0.1	2.1	2	0	0	2	2	2	1	Leucyl-tRNA	synthetase,	Domain	2
Methyltrn_RNA_3	PF02598.12	gi|479325676|ref|YP_007865731.1|	-	1.1e-31	110.3	0.3	4.2e-31	108.3	0.2	1.8	1	1	0	1	1	1	1	Putative	RNA	methyltransferase
Ribosomal_L3	PF00297.17	gi|479325677|ref|YP_007865732.1|	-	1.5e-54	185.1	0.0	1.9e-54	184.8	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L3
Ribosomal_L4	PF00573.17	gi|479325678|ref|YP_007865733.1|	-	5.5e-37	127.0	0.1	6.5e-37	126.7	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L4/L1	family
Hexokinase_1	PF00349.16	gi|479325678|ref|YP_007865733.1|	-	0.083	12.2	0.0	0.14	11.4	0.0	1.3	1	0	0	1	1	1	0	Hexokinase
Ribosomal_L23	PF00276.15	gi|479325679|ref|YP_007865734.1|	-	1.6e-14	53.6	2.6	3.9e-14	52.3	1.8	1.6	1	1	0	1	1	1	1	Ribosomal	protein	L23
TusA	PF01206.12	gi|479325679|ref|YP_007865734.1|	-	0.041	13.4	0.1	0.05	13.2	0.1	1.2	1	0	0	1	1	1	0	Sulfurtransferase	TusA
Ribosomal_L2_C	PF03947.13	gi|479325680|ref|YP_007865735.1|	-	1.5e-44	150.9	1.2	2.4e-44	150.2	0.9	1.3	1	0	0	1	1	1	1	Ribosomal	Proteins	L2,	C-terminal	domain
Ribosomal_L2	PF00181.18	gi|479325680|ref|YP_007865735.1|	-	3.1e-13	49.5	0.0	1.1e-12	47.7	0.0	2.0	2	0	0	2	2	2	1	Ribosomal	Proteins	L2,	RNA	binding	domain
Ribosomal_S19	PF00203.16	gi|479325681|ref|YP_007865736.1|	-	5.3e-25	86.8	0.7	7e-25	86.4	0.5	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S19
RNA_pol_Rpb2_4	PF04566.8	gi|479325681|ref|YP_007865736.1|	-	0.0064	16.2	0.7	0.012	15.4	0.5	1.5	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	4
MerR_1	PF13411.1	gi|479325681|ref|YP_007865736.1|	-	0.13	12.0	2.8	0.12	12.1	0.5	2.0	3	0	0	3	3	3	0	MerR	HTH	family	regulatory	protein
Ribosomal_L22	PF00237.14	gi|479325682|ref|YP_007865737.1|	-	9.3e-34	115.5	0.5	1.2e-33	115.1	0.3	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L22p/L17e
Ribosomal_S3_C	PF00189.15	gi|479325683|ref|YP_007865738.1|	-	7e-18	64.6	0.7	1.5e-17	63.5	0.5	1.6	1	0	0	1	1	1	1	Ribosomal	protein	S3,	C-terminal	domain
KH_2	PF07650.12	gi|479325683|ref|YP_007865738.1|	-	6.4e-16	57.6	0.2	1.8e-15	56.2	0.1	1.8	1	0	0	1	1	1	1	KH	domain
KH_1	PF00013.24	gi|479325683|ref|YP_007865738.1|	-	0.0061	16.1	1.9	0.0096	15.5	0.2	2.2	3	0	0	3	3	3	1	KH	domain
KH_3	PF13014.1	gi|479325683|ref|YP_007865738.1|	-	0.025	14.2	0.7	0.092	12.4	0.5	2.0	1	0	0	1	1	1	0	KH	domain
RteC	PF09357.5	gi|479325683|ref|YP_007865738.1|	-	0.036	13.9	0.0	0.062	13.1	0.0	1.3	1	0	0	1	1	1	0	RteC	protein
Ribosomal_L29	PF00831.18	gi|479325684|ref|YP_007865739.1|	-	7.2e-22	76.8	7.5	8.5e-22	76.6	5.2	1.1	1	0	0	1	1	1	1	Ribosomal	L29	protein
DUF29	PF01724.11	gi|479325684|ref|YP_007865739.1|	-	0.00057	19.7	0.8	0.00059	19.6	0.5	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF29
Uds1	PF15456.1	gi|479325684|ref|YP_007865739.1|	-	0.33	10.9	2.7	0.4	10.6	1.6	1.4	1	1	0	1	1	1	0	Up-regulated	During	Septation
UPF0086	PF01868.11	gi|479325685|ref|YP_007865740.1|	-	4.3e-11	42.2	0.0	5e-11	42.1	0.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	UPF0086
Ribosomal_S17	PF00366.15	gi|479325686|ref|YP_007865741.1|	-	9.2e-22	76.8	1.4	1.2e-21	76.4	1.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S17
Ribosomal_L14	PF00238.14	gi|479325687|ref|YP_007865742.1|	-	2e-39	134.0	0.0	2.3e-39	133.8	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L14p/L23e
PAS_3	PF08447.6	gi|479325687|ref|YP_007865742.1|	-	0.053	13.6	0.0	0.087	12.9	0.0	1.3	1	0	0	1	1	1	0	PAS	fold
KOW	PF00467.24	gi|479325688|ref|YP_007865743.1|	-	1e-07	31.3	0.6	2.2e-07	30.3	0.4	1.7	1	0	0	1	1	1	1	KOW	motif
GTP_EFTU_D2	PF03144.20	gi|479325688|ref|YP_007865743.1|	-	0.0053	16.8	0.2	0.008	16.2	0.1	1.3	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
Methyltrans_RNA	PF04452.9	gi|479325688|ref|YP_007865743.1|	-	0.11	11.5	0.1	0.14	11.2	0.0	1.1	1	0	0	1	1	1	0	RNA	methyltransferase
Ribosomal_S4e	PF00900.15	gi|479325689|ref|YP_007865744.1|	-	7.5e-28	96.0	0.2	1.6e-27	94.9	0.1	1.6	1	0	0	1	1	1	1	Ribosomal	family	S4e
S4	PF01479.20	gi|479325689|ref|YP_007865744.1|	-	2e-13	49.5	0.2	7.9e-13	47.6	0.1	2.1	2	0	0	2	2	2	1	S4	domain
RS4NT	PF08071.7	gi|479325689|ref|YP_007865744.1|	-	1.1e-07	31.5	0.8	2e-07	30.7	0.5	1.4	1	0	0	1	1	1	1	RS4NT	(NUC023)	domain
S4_2	PF13275.1	gi|479325689|ref|YP_007865744.1|	-	0.016	14.8	0.1	0.048	13.2	0.0	1.8	2	0	0	2	2	2	0	S4	domain
Ribosomal_L5_C	PF00673.16	gi|479325690|ref|YP_007865745.1|	-	3.7e-26	90.6	0.0	1.2e-25	89.0	0.0	1.7	2	0	0	2	2	2	1	ribosomal	L5P	family	C-terminus
Ribosomal_L5	PF00281.14	gi|479325690|ref|YP_007865745.1|	-	1e-20	73.2	0.1	1.8e-20	72.4	0.1	1.4	1	0	0	1	1	1	1	Ribosomal	protein	L5
Vsr	PF03852.10	gi|479325690|ref|YP_007865745.1|	-	0.021	14.4	0.6	0.045	13.3	0.0	1.9	2	0	0	2	2	2	0	DNA	mismatch	endonuclease	Vsr
URO-D	PF01208.12	gi|479325690|ref|YP_007865745.1|	-	0.071	12.0	0.0	0.094	11.6	0.0	1.1	1	0	0	1	1	1	0	Uroporphyrinogen	decarboxylase	(URO-D)
HTH_17	PF12728.2	gi|479325690|ref|YP_007865745.1|	-	5.7	7.2	6.5	16	5.8	0.4	3.0	2	1	0	2	2	2	0	Helix-turn-helix	domain
Ribosomal_S14	PF00253.16	gi|479325691|ref|YP_007865746.1|	-	4.2e-17	61.2	2.7	4.8e-17	61.0	1.9	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S14p/S29e
zf-HYPF	PF07503.7	gi|479325691|ref|YP_007865746.1|	-	0.0024	17.2	0.8	0.077	12.4	0.0	2.1	2	0	0	2	2	2	1	HypF	finger
Ribosomal_L37ae	PF01780.14	gi|479325691|ref|YP_007865746.1|	-	0.01	15.6	0.3	0.012	15.5	0.2	1.2	1	0	0	1	1	1	0	Ribosomal	L37ae	protein	family
Zn_Tnp_IS1595	PF12760.2	gi|479325691|ref|YP_007865746.1|	-	0.031	14.0	1.7	0.039	13.7	1.2	1.3	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
DUF2318	PF10080.4	gi|479325691|ref|YP_007865746.1|	-	0.044	13.5	0.3	0.051	13.3	0.2	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2318)
Zn_Tnp_IS91	PF14319.1	gi|479325691|ref|YP_007865746.1|	-	0.093	12.2	0.3	0.091	12.2	0.2	1.1	1	0	0	1	1	1	0	Transposase	zinc-binding	domain
zf-C4pol	PF14260.1	gi|479325691|ref|YP_007865746.1|	-	0.11	12.5	1.2	1.4	8.9	0.1	2.0	1	1	1	2	2	2	0	C4-type	zinc-finger	of	DNA	polymerase	delta
DUF1451	PF07295.6	gi|479325691|ref|YP_007865746.1|	-	0.11	12.2	0.2	0.11	12.2	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1451)
DZR	PF12773.2	gi|479325691|ref|YP_007865746.1|	-	0.14	12.0	1.1	0.2	11.4	0.8	1.3	1	1	0	1	1	1	0	Double	zinc	ribbon
A2L_zn_ribbon	PF08792.5	gi|479325691|ref|YP_007865746.1|	-	0.22	11.0	2.2	0.34	10.4	1.5	1.3	1	0	0	1	1	1	0	A2L	zinc	ribbon	domain
DUF2039	PF10217.4	gi|479325691|ref|YP_007865746.1|	-	1.2	9.2	5.3	2.6	8.1	3.2	1.9	1	1	1	2	2	2	0	Uncharacterized	conserved	protein	(DUF2039)
zf-FPG_IleRS	PF06827.9	gi|479325691|ref|YP_007865746.1|	-	1.2	8.8	5.2	6.4	6.5	3.6	1.9	1	1	0	1	1	1	0	Zinc	finger	found	in	FPG	and	IleRS
zf-CCHC_3	PF13917.1	gi|479325691|ref|YP_007865746.1|	-	7	6.4	7.5	43	3.9	5.2	2.2	1	1	0	1	1	1	0	Zinc	knuckle
Ribosomal_S8	PF00410.14	gi|479325692|ref|YP_007865747.1|	-	2.1e-25	89.0	0.0	2.8e-25	88.6	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S8
Ribosomal_L6	PF00347.18	gi|479325693|ref|YP_007865748.1|	-	1.3e-24	86.4	6.9	1.3e-14	54.3	0.7	2.1	2	0	0	2	2	2	2	Ribosomal	protein	L6
DNA_pol3_beta	PF00712.14	gi|479325693|ref|YP_007865748.1|	-	0.0073	16.1	0.5	0.31	10.9	0.0	2.6	2	1	0	2	2	2	1	DNA	polymerase	III	beta	subunit,	N-terminal	domain
RNA_bind_2	PF10133.4	gi|479325693|ref|YP_007865748.1|	-	0.1	12.6	0.5	4	7.5	0.3	2.8	2	1	0	2	2	2	0	Predicted	RNA-binding	protein
Ribosomal_L32e	PF01655.13	gi|479325694|ref|YP_007865749.1|	-	3.6e-38	129.9	0.5	4.7e-38	129.6	0.4	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L32
Ribosomal_L19e	PF01280.15	gi|479325695|ref|YP_007865750.1|	-	3e-47	160.1	13.6	3.3e-47	159.9	9.4	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L19e
YihI	PF04220.7	gi|479325695|ref|YP_007865750.1|	-	0.94	8.7	6.4	1.4	8.2	4.4	1.2	1	0	0	1	1	1	0	Der	GTPase	activator	(YihI)
Ribosomal_L18p	PF00861.17	gi|479325696|ref|YP_007865751.1|	-	1.9e-34	118.4	0.2	2.7e-34	117.9	0.1	1.2	1	0	0	1	1	1	1	Ribosomal	L18p/L5e	family
Ribosomal_L18_c	PF14204.1	gi|479325696|ref|YP_007865751.1|	-	2e-11	44.2	0.0	3.9e-11	43.3	0.0	1.4	1	0	0	1	1	1	1	Ribosomal	L18	C-terminal	region
Ribosomal_S5	PF00333.15	gi|479325697|ref|YP_007865752.1|	-	9.7e-21	73.2	2.2	1.7e-20	72.5	1.5	1.4	1	0	0	1	1	1	1	Ribosomal	protein	S5,	N-terminal	domain
Ribosomal_S5_C	PF03719.10	gi|479325697|ref|YP_007865752.1|	-	3.7e-20	70.9	0.0	7.9e-20	69.9	0.0	1.5	1	0	0	1	1	1	1	Ribosomal	protein	S5,	C-terminal	domain
Ribosomal_L30	PF00327.15	gi|479325698|ref|YP_007865753.1|	-	2.1e-16	59.2	0.2	6.3e-16	57.6	0.0	1.9	3	0	0	3	3	3	1	Ribosomal	protein	L30p/L7e
Reovirus_Mu2	PF07781.6	gi|479325698|ref|YP_007865753.1|	-	0.0036	15.3	0.0	0.0043	15.1	0.0	1.0	1	0	0	1	1	1	1	Reovirus	minor	core	protein	Mu-2
Ribosomal_L18e	PF00828.14	gi|479325699|ref|YP_007865754.1|	-	2.8e-28	98.8	1.2	4e-28	98.3	0.8	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L18e/L15
SecY	PF00344.15	gi|479325700|ref|YP_007865755.1|	-	3.1e-78	263.1	33.2	4.5e-78	262.5	23.0	1.2	1	0	0	1	1	1	1	SecY	translocase
Plug_translocon	PF10559.4	gi|479325700|ref|YP_007865755.1|	-	1.4e-08	34.0	0.6	1.4e-08	34.0	0.4	2.9	3	0	0	3	3	3	1	Plug	domain	of	Sec61p
DUF3093	PF11292.3	gi|479325700|ref|YP_007865755.1|	-	0.56	10.0	0.0	0.56	10.0	0.0	2.6	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3093)
AAA_18	PF13238.1	gi|479325701|ref|YP_007865756.1|	-	9.4e-12	45.3	0.1	1.2e-11	44.9	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|479325701|ref|YP_007865756.1|	-	1.8e-06	28.7	0.1	3e-06	28.0	0.0	1.3	1	1	0	1	1	1	1	AAA	domain
Thymidylate_kin	PF02223.12	gi|479325701|ref|YP_007865756.1|	-	0.00032	20.1	0.1	0.14	11.5	0.0	2.3	2	1	0	2	2	2	2	Thymidylate	kinase
AAA_28	PF13521.1	gi|479325701|ref|YP_007865756.1|	-	0.0021	18.0	0.0	0.0042	17.0	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|479325701|ref|YP_007865756.1|	-	0.0065	16.4	0.0	0.0087	16.0	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
NTPase_1	PF03266.10	gi|479325701|ref|YP_007865756.1|	-	0.0076	15.9	0.4	0.017	14.8	0.2	1.5	1	0	0	1	1	1	1	NTPase
AAA_30	PF13604.1	gi|479325701|ref|YP_007865756.1|	-	0.031	13.8	0.1	0.086	12.4	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
KTI12	PF08433.5	gi|479325701|ref|YP_007865756.1|	-	0.061	12.5	0.0	0.094	11.9	0.0	1.3	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
AAA_22	PF13401.1	gi|479325701|ref|YP_007865756.1|	-	0.068	13.3	1.1	0.13	12.3	0.8	1.7	1	1	0	1	1	1	0	AAA	domain
ArgK	PF03308.11	gi|479325701|ref|YP_007865756.1|	-	0.075	11.7	0.1	0.12	11.0	0.1	1.4	1	0	0	1	1	1	0	ArgK	protein
AAA_19	PF13245.1	gi|479325701|ref|YP_007865756.1|	-	0.098	12.4	0.4	0.098	12.4	0.3	2.0	3	0	0	3	3	3	0	Part	of	AAA	domain
DUF106	PF01956.11	gi|479325702|ref|YP_007865757.1|	-	0.0019	17.7	1.0	0.0024	17.4	0.7	1.2	1	0	0	1	1	1	1	Integral	membrane	protein	DUF106
SNARE_assoc	PF09335.6	gi|479325702|ref|YP_007865757.1|	-	0.0029	17.7	0.5	0.0053	16.9	0.4	1.5	1	0	0	1	1	1	1	SNARE	associated	Golgi	protein
RGS	PF00615.14	gi|479325702|ref|YP_007865757.1|	-	0.029	14.4	2.0	0.053	13.6	1.4	1.4	1	0	0	1	1	1	0	Regulator	of	G	protein	signaling	domain
UPF0122	PF04297.9	gi|479325702|ref|YP_007865757.1|	-	0.037	14.0	1.4	0.067	13.2	1.0	1.4	1	0	0	1	1	1	0	Putative	helix-turn-helix	protein,	YlxM	/	p13	like
DDE_Tnp_1_6	PF13751.1	gi|479325702|ref|YP_007865757.1|	-	0.056	13.4	0.0	0.075	13.0	0.0	1.1	1	0	0	1	1	1	0	Transposase	DDE	domain
DUF2400	PF09674.5	gi|479325702|ref|YP_007865757.1|	-	0.12	12.0	0.0	0.14	11.8	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2400)
Ribosomal_L34e	PF01199.13	gi|479325703|ref|YP_007865758.1|	-	8.3e-27	93.2	1.8	9e-27	93.1	1.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L34e
Endonuclease_7	PF02945.10	gi|479325703|ref|YP_007865758.1|	-	0.058	13.1	0.1	0.069	12.8	0.1	1.2	1	0	0	1	1	1	0	Recombination	endonuclease	VII
zf-P11	PF03854.9	gi|479325703|ref|YP_007865758.1|	-	0.065	12.7	1.2	4.8	6.7	0.1	2.2	2	0	0	2	2	2	0	P-11	zinc	finger
PHD	PF00628.24	gi|479325703|ref|YP_007865758.1|	-	0.088	12.5	0.9	0.26	11.0	0.6	1.7	1	1	0	1	1	1	0	PHD-finger
DUF4428	PF14471.1	gi|479325703|ref|YP_007865758.1|	-	0.094	12.4	0.9	0.67	9.7	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4428)
DUF581	PF04570.9	gi|479325703|ref|YP_007865758.1|	-	0.13	11.5	0.2	0.13	11.5	0.2	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF581)
Cytidylate_kin2	PF13189.1	gi|479325704|ref|YP_007865759.1|	-	1.7e-21	76.9	1.7	2.7e-20	73.0	1.2	2.0	1	1	0	1	1	1	1	Cytidylate	kinase-like	family
AAA_18	PF13238.1	gi|479325704|ref|YP_007865759.1|	-	9.7e-19	67.9	0.2	1.3e-18	67.4	0.2	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|479325704|ref|YP_007865759.1|	-	6.5e-12	46.3	0.4	1.4e-11	45.2	0.2	1.4	1	1	0	1	1	1	1	AAA	domain
SKI	PF01202.17	gi|479325704|ref|YP_007865759.1|	-	1.4e-06	28.2	0.3	2.4e-06	27.4	0.2	1.5	1	1	0	1	1	1	1	Shikimate	kinase
AAA_33	PF13671.1	gi|479325704|ref|YP_007865759.1|	-	6.2e-06	26.1	0.0	1.8e-05	24.6	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
ADK	PF00406.17	gi|479325704|ref|YP_007865759.1|	-	1.1e-05	25.4	0.0	2.1e-05	24.4	0.0	1.5	2	0	0	2	2	2	1	Adenylate	kinase
AAA	PF00004.24	gi|479325704|ref|YP_007865759.1|	-	1.3e-05	25.4	0.0	2.8e-05	24.3	0.0	1.6	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_11	PF13086.1	gi|479325704|ref|YP_007865759.1|	-	4.4e-05	23.1	0.1	0.00049	19.7	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|479325704|ref|YP_007865759.1|	-	8.4e-05	22.2	0.0	0.00015	21.4	0.0	1.4	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_22	PF13401.1	gi|479325704|ref|YP_007865759.1|	-	0.0004	20.5	0.0	0.00071	19.7	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
KTI12	PF08433.5	gi|479325704|ref|YP_007865759.1|	-	0.00065	18.9	0.1	0.0037	16.4	0.0	2.0	2	0	0	2	2	2	1	Chromatin	associated	protein	KTI12
TIP49	PF06068.8	gi|479325704|ref|YP_007865759.1|	-	0.0011	17.7	0.0	0.0015	17.2	0.0	1.4	1	0	0	1	1	1	1	TIP49	C-terminus
Zot	PF05707.7	gi|479325704|ref|YP_007865759.1|	-	0.0013	18.2	0.0	0.0019	17.6	0.0	1.3	1	0	0	1	1	1	1	Zonular	occludens	toxin	(Zot)
DUF2075	PF09848.4	gi|479325704|ref|YP_007865759.1|	-	0.0014	17.6	0.0	0.002	17.1	0.0	1.3	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
Zeta_toxin	PF06414.7	gi|479325704|ref|YP_007865759.1|	-	0.0017	17.4	0.2	0.0031	16.6	0.0	1.5	2	0	0	2	2	1	1	Zeta	toxin
RNA_helicase	PF00910.17	gi|479325704|ref|YP_007865759.1|	-	0.0018	18.3	0.1	0.0091	16.1	0.0	2.1	2	0	0	2	2	2	1	RNA	helicase
AAA_28	PF13521.1	gi|479325704|ref|YP_007865759.1|	-	0.0023	17.9	0.0	0.0028	17.6	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
NTPase_1	PF03266.10	gi|479325704|ref|YP_007865759.1|	-	0.0039	16.9	0.0	0.0059	16.3	0.0	1.3	1	0	0	1	1	1	1	NTPase
CoaE	PF01121.15	gi|479325704|ref|YP_007865759.1|	-	0.0055	16.1	0.2	0.6	9.4	0.0	2.1	1	1	1	2	2	2	2	Dephospho-CoA	kinase
RuvB_N	PF05496.7	gi|479325704|ref|YP_007865759.1|	-	0.0061	15.6	0.0	0.01	14.8	0.0	1.4	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
IPT	PF01745.11	gi|479325704|ref|YP_007865759.1|	-	0.013	14.6	0.2	0.029	13.5	0.0	1.7	2	0	0	2	2	2	0	Isopentenyl	transferase
AAA_16	PF13191.1	gi|479325704|ref|YP_007865759.1|	-	0.018	15.0	0.0	0.025	14.5	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_14	PF13173.1	gi|479325704|ref|YP_007865759.1|	-	0.021	14.7	0.5	0.05	13.5	0.3	1.9	1	1	0	1	1	1	0	AAA	domain
T2SE	PF00437.15	gi|479325704|ref|YP_007865759.1|	-	0.038	12.8	0.2	0.34	9.7	0.1	2.0	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
NACHT	PF05729.7	gi|479325704|ref|YP_007865759.1|	-	0.038	13.6	0.0	0.062	12.9	0.0	1.3	1	0	0	1	1	1	0	NACHT	domain
AAA_24	PF13479.1	gi|479325704|ref|YP_007865759.1|	-	0.044	13.3	0.0	0.059	12.9	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
MobB	PF03205.9	gi|479325704|ref|YP_007865759.1|	-	0.047	13.3	0.0	0.11	12.2	0.0	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Glyco_tran_WbsX	PF14307.1	gi|479325704|ref|YP_007865759.1|	-	0.065	12.3	0.1	0.083	12.0	0.1	1.1	1	0	0	1	1	1	0	Glycosyltransferase	WbsX
AAA_10	PF12846.2	gi|479325704|ref|YP_007865759.1|	-	0.081	12.3	0.2	0.61	9.4	0.0	2.0	2	0	0	2	2	2	0	AAA-like	domain
APS_kinase	PF01583.15	gi|479325704|ref|YP_007865759.1|	-	0.09	12.4	0.0	0.16	11.6	0.0	1.4	1	0	0	1	1	1	0	Adenylylsulphate	kinase
AAA_25	PF13481.1	gi|479325704|ref|YP_007865759.1|	-	0.092	12.1	0.0	0.13	11.6	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.12	gi|479325704|ref|YP_007865759.1|	-	0.099	12.0	0.0	0.19	11.1	0.0	1.5	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
PRK	PF00485.13	gi|479325704|ref|YP_007865759.1|	-	0.11	12.0	0.6	0.35	10.3	0.0	2.0	1	1	1	2	2	2	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_5	PF07728.9	gi|479325704|ref|YP_007865759.1|	-	0.14	11.8	0.0	0.25	11.0	0.0	1.3	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
Archease	PF01951.11	gi|479325707|ref|YP_007865762.1|	-	1.3e-46	157.9	0.6	1.4e-46	157.8	0.4	1.0	1	0	0	1	1	1	1	Archease	protein	family	(MTH1598/TM1083)
UPF0150	PF03681.10	gi|479325707|ref|YP_007865762.1|	-	0.055	13.0	0.2	2.4	7.8	0.0	2.4	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0150)
Peptidase_M54	PF07998.6	gi|479325708|ref|YP_007865763.1|	-	7.6e-60	202.0	2.6	8.6e-60	201.8	1.8	1.0	1	0	0	1	1	1	1	Peptidase	family	M54
Peptidase_M10	PF00413.19	gi|479325708|ref|YP_007865763.1|	-	0.0027	17.4	0.0	0.0027	17.4	0.0	1.2	1	0	0	1	1	1	1	Matrixin
Peptidase_M66	PF10462.4	gi|479325708|ref|YP_007865763.1|	-	0.0091	14.8	0.0	0.012	14.4	0.0	1.2	1	0	0	1	1	1	1	Peptidase	M66
Peptidase_M43	PF05572.8	gi|479325708|ref|YP_007865763.1|	-	0.011	15.2	0.1	0.018	14.6	0.1	1.3	1	0	0	1	1	1	0	Pregnancy-associated	plasma	protein-A
Reprolysin_2	PF13574.1	gi|479325708|ref|YP_007865763.1|	-	0.027	14.5	0.8	0.049	13.6	0.5	1.4	1	1	0	1	1	1	0	Metallo-peptidase	family	M12B	Reprolysin-like
MIF4G	PF02854.14	gi|479325708|ref|YP_007865763.1|	-	0.045	13.1	0.2	0.067	12.5	0.1	1.3	1	0	0	1	1	1	0	MIF4G	domain
Reprolysin_5	PF13688.1	gi|479325708|ref|YP_007865763.1|	-	0.072	13.0	0.0	0.094	12.6	0.0	1.3	1	0	0	1	1	1	0	Metallo-peptidase	family	M12
Reprolysin_4	PF13583.1	gi|479325708|ref|YP_007865763.1|	-	0.09	12.2	0.0	0.14	11.7	0.0	1.3	1	0	0	1	1	1	0	Metallo-peptidase	family	M12B	Reprolysin-like
Metallopep	PF12044.3	gi|479325708|ref|YP_007865763.1|	-	0.11	10.9	0.5	0.14	10.5	0.4	1.1	1	0	0	1	1	1	0	Putative	peptidase	family
Reprolysin_3	PF13582.1	gi|479325708|ref|YP_007865763.1|	-	0.17	12.4	0.4	0.28	11.7	0.3	1.5	1	1	0	1	1	1	0	Metallo-peptidase	family	M12B	Reprolysin-like
Acetyltransf_7	PF13508.1	gi|479325709|ref|YP_007865764.1|	-	4.4e-07	29.9	0.1	6e-07	29.5	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|479325709|ref|YP_007865764.1|	-	8.6e-05	22.2	0.2	0.00041	20.0	0.1	1.9	1	1	0	1	1	1	1	FR47-like	protein
Acetyltransf_1	PF00583.19	gi|479325709|ref|YP_007865764.1|	-	8.7e-05	22.4	0.4	0.00085	19.3	0.3	2.0	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_4	PF13420.1	gi|479325709|ref|YP_007865764.1|	-	0.042	13.7	0.0	0.056	13.3	0.0	1.1	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
Asp_protease_2	PF13650.1	gi|479325710|ref|YP_007865765.1|	-	0.025	15.0	0.0	0.038	14.4	0.0	1.2	1	0	0	1	1	1	0	Aspartyl	protease
Myb_DNA-bind_4	PF13837.1	gi|479325711|ref|YP_007865766.1|	-	0.0025	17.8	0.1	0.0028	17.7	0.1	1.1	1	0	0	1	1	1	1	Myb/SANT-like	DNA-binding	domain
Biotin_lipoyl	PF00364.17	gi|479325711|ref|YP_007865766.1|	-	0.12	11.9	0.2	0.15	11.7	0.2	1.2	1	0	0	1	1	1	0	Biotin-requiring	enzyme
SSV1_ORF_D-335	PF07935.6	gi|479325713|ref|YP_007865768.1|	-	3.3e-27	94.0	0.3	3.9e-27	93.7	0.2	1.0	1	0	0	1	1	1	1	ORF	D-335-like	protein
Cys_Met_Meta_PP	PF01053.15	gi|479325714|ref|YP_007865769.1|	-	0.06	11.6	0.0	0.069	11.4	0.0	1.1	1	0	0	1	1	1	0	Cys/Met	metabolism	PLP-dependent	enzyme
ST7	PF04184.7	gi|479325714|ref|YP_007865769.1|	-	0.52	8.4	2.8	0.51	8.4	2.0	1.0	1	0	0	1	1	1	0	ST7	protein
Aldo_ket_red	PF00248.16	gi|479325715|ref|YP_007865770.1|	-	1e-08	34.3	0.1	1.2e-08	34.1	0.1	1.0	1	0	0	1	1	1	1	Aldo/keto	reductase	family
UPF0104	PF03706.8	gi|479325716|ref|YP_007865771.1|	-	0.016	14.4	0.4	0.019	14.2	0.3	1.0	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0104)
Endonuc_Holl	PF10107.4	gi|479325717|ref|YP_007865772.1|	-	4.2e-47	159.7	5.9	9.8e-47	158.5	4.1	1.6	1	1	0	1	1	1	1	Endonuclease	related	to	archaeal	Holliday	junction	resolvase
IncA	PF04156.9	gi|479325717|ref|YP_007865772.1|	-	0.0087	15.6	5.8	0.0087	15.6	4.0	1.9	2	0	0	2	2	2	1	IncA	protein
ABC2_membrane_3	PF12698.2	gi|479325717|ref|YP_007865772.1|	-	0.018	14.0	0.2	0.018	14.0	0.1	1.2	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
PilJ	PF13675.1	gi|479325717|ref|YP_007865772.1|	-	0.021	15.1	7.0	0.041	14.2	4.9	1.4	1	0	0	1	1	1	0	Type	IV	pili	methyl-accepting	chemotaxis	transducer	N-term
Gastrin	PF00918.12	gi|479325717|ref|YP_007865772.1|	-	0.022	15.5	3.7	0.042	14.6	2.6	1.4	1	0	0	1	1	1	0	Gastrin/cholecystokinin	family
Shisa	PF13908.1	gi|479325717|ref|YP_007865772.1|	-	0.028	14.6	1.1	0.036	14.2	0.8	1.1	1	0	0	1	1	1	0	Wnt	and	FGF	inhibitory	regulator
EphA2_TM	PF14575.1	gi|479325717|ref|YP_007865772.1|	-	0.034	14.5	2.1	0.09	13.1	1.4	1.8	1	1	0	1	1	1	0	Ephrin	type-A	receptor	2	transmembrane	domain
VRR_NUC	PF08774.6	gi|479325717|ref|YP_007865772.1|	-	0.035	14.1	0.6	0.08	12.9	0.4	1.9	1	1	0	1	1	1	0	VRR-NUC	domain
DUF2746	PF10874.3	gi|479325717|ref|YP_007865772.1|	-	0.05	13.7	1.0	1	9.5	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2746)
DUF4446	PF14584.1	gi|479325717|ref|YP_007865772.1|	-	0.073	12.8	6.8	0.036	13.9	2.6	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4446)
DDE_Tnp_IS66	PF03050.9	gi|479325717|ref|YP_007865772.1|	-	0.16	11.1	4.5	0.24	10.5	3.1	1.2	1	0	0	1	1	1	0	Transposase	IS66	family
eIF3_p135	PF12807.2	gi|479325717|ref|YP_007865772.1|	-	0.2	11.6	7.8	0.6	10.0	5.1	1.8	1	1	1	2	2	2	0	Translation	initiation	factor	eIF3	subunit	135
Spore_III_AF	PF09581.5	gi|479325717|ref|YP_007865772.1|	-	0.21	11.4	8.3	0.64	9.8	5.7	1.7	1	1	0	1	1	1	0	Stage	III	sporulation	protein	AF	(Spore_III_AF)
MbeB_N	PF04837.7	gi|479325717|ref|YP_007865772.1|	-	0.3	11.1	7.4	1	9.4	2.9	2.9	2	1	0	2	2	2	0	MbeB-like,	N-term	conserved	region
Cullin_Nedd8	PF10557.4	gi|479325717|ref|YP_007865772.1|	-	0.31	10.8	5.4	1.1	9.0	1.7	2.5	2	1	0	2	2	2	0	Cullin	protein	neddylation	domain
ExbD	PF02472.11	gi|479325717|ref|YP_007865772.1|	-	0.36	10.8	3.9	0.13	12.2	0.9	1.6	2	0	0	2	2	2	0	Biopolymer	transport	protein	ExbD/TolR
DUF4207	PF13904.1	gi|479325717|ref|YP_007865772.1|	-	0.83	8.9	16.5	1.3	8.3	11.5	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4207)
Kinetocho_Slk19	PF12709.2	gi|479325717|ref|YP_007865772.1|	-	0.87	9.7	13.1	0.15	12.1	6.0	1.9	2	0	0	2	2	2	0	Central	kinetochore-associated
Mitofilin	PF09731.4	gi|479325717|ref|YP_007865772.1|	-	1.2	7.6	11.6	2.1	6.9	8.0	1.3	1	0	0	1	1	1	0	Mitochondrial	inner	membrane	protein
DUF948	PF06103.6	gi|479325717|ref|YP_007865772.1|	-	1.4	8.8	8.6	0.23	11.3	2.2	2.4	2	1	1	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF948)
DUF4363	PF14276.1	gi|479325717|ref|YP_007865772.1|	-	2.9	7.6	10.8	0.18	11.4	2.0	2.5	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4363)
DUF2232	PF09991.4	gi|479325717|ref|YP_007865772.1|	-	5.6	5.8	7.6	1.5	7.7	3.3	1.5	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2232)
Xan_ur_permease	PF00860.15	gi|479325718|ref|YP_007865773.1|	-	0.0031	16.0	1.8	0.0052	15.3	1.3	1.3	1	1	0	1	1	1	1	Permease	family
DUF1049	PF06305.6	gi|479325718|ref|YP_007865773.1|	-	0.072	12.5	0.1	0.072	12.5	0.0	2.2	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1049)
DUF3902	PF13042.1	gi|479325718|ref|YP_007865773.1|	-	0.09	12.0	1.8	0.21	10.8	1.3	1.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3902)
FtsX	PF02687.16	gi|479325718|ref|YP_007865773.1|	-	0.33	10.7	6.9	0.55	10.0	4.8	1.3	1	0	0	1	1	1	0	FtsX-like	permease	family
DUF4190	PF13828.1	gi|479325718|ref|YP_007865773.1|	-	3.4	7.2	8.0	1.2	8.7	0.2	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4190)
TcdB_toxin_midN	PF12256.3	gi|479325719|ref|YP_007865774.1|	-	0.0077	15.7	0.0	0.0096	15.3	0.0	1.1	1	0	0	1	1	1	1	Insecticide	toxin	TcdB	middle/N-terminal	region
NADHdh-2_N	PF12155.3	gi|479325719|ref|YP_007865774.1|	-	2.3	8.4	7.4	2.7	8.2	4.3	1.7	1	1	0	1	1	1	0	NADH	dehydrogenase	subunit	2	N-terminal
PAZ_siRNAbind	PF12212.3	gi|479325721|ref|YP_007865776.1|	-	0.043	13.4	0.2	0.38	10.4	0.2	2.5	2	0	0	2	2	2	0	Piwi/Argonaute/Zwille	siRNA-binding	domain
DUF524	PF04411.7	gi|479325724|ref|YP_007865779.1|	-	0.01	15.6	0.9	0.33	10.7	0.6	2.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF524)
AAA_5	PF07728.9	gi|479325725|ref|YP_007865780.1|	-	1.1e-12	47.8	0.0	1.8e-11	43.9	0.0	2.2	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA	PF00004.24	gi|479325725|ref|YP_007865780.1|	-	1.5e-05	25.2	0.0	6.1e-05	23.2	0.0	2.2	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_17	PF13207.1	gi|479325725|ref|YP_007865780.1|	-	4.2e-05	24.3	1.9	0.00027	21.7	1.2	2.4	1	1	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|479325725|ref|YP_007865780.1|	-	4.5e-05	23.3	0.3	0.00052	19.9	0.0	2.8	1	1	1	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|479325725|ref|YP_007865780.1|	-	0.00035	20.6	0.0	0.00071	19.6	0.0	1.5	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|479325725|ref|YP_007865780.1|	-	0.00072	19.7	0.0	0.006	16.7	0.0	2.4	2	1	0	2	2	2	1	AAA	domain
IstB_IS21	PF01695.12	gi|479325725|ref|YP_007865780.1|	-	0.00097	18.5	0.0	0.0022	17.4	0.0	1.5	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_18	PF13238.1	gi|479325725|ref|YP_007865780.1|	-	0.0016	18.7	0.0	0.0016	18.7	0.0	2.5	3	2	0	3	3	2	1	AAA	domain
AAA_25	PF13481.1	gi|479325725|ref|YP_007865780.1|	-	0.0069	15.8	0.0	0.014	14.7	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
Mg_chelatase	PF01078.16	gi|479325725|ref|YP_007865780.1|	-	0.0083	15.3	0.0	0.016	14.3	0.0	1.4	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
AAA_19	PF13245.1	gi|479325725|ref|YP_007865780.1|	-	0.0094	15.6	0.0	0.017	14.8	0.0	1.4	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_33	PF13671.1	gi|479325725|ref|YP_007865780.1|	-	0.013	15.4	0.0	0.026	14.4	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_2	PF07724.9	gi|479325725|ref|YP_007865780.1|	-	0.013	15.4	0.0	0.036	13.9	0.0	1.8	1	1	0	1	1	1	0	AAA	domain	(Cdc48	subfamily)
KTI12	PF08433.5	gi|479325725|ref|YP_007865780.1|	-	0.017	14.3	0.1	0.04	13.1	0.0	1.7	2	0	0	2	2	1	0	Chromatin	associated	protein	KTI12
RuvB_N	PF05496.7	gi|479325725|ref|YP_007865780.1|	-	0.021	13.8	0.0	0.041	12.9	0.0	1.4	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
RNA_helicase	PF00910.17	gi|479325725|ref|YP_007865780.1|	-	0.03	14.4	0.0	0.21	11.7	0.0	2.4	2	1	1	3	3	3	0	RNA	helicase
AAA_11	PF13086.1	gi|479325725|ref|YP_007865780.1|	-	0.031	13.8	0.8	0.24	10.9	0.1	2.5	2	1	0	2	2	2	0	AAA	domain
TIP49	PF06068.8	gi|479325725|ref|YP_007865780.1|	-	0.043	12.5	3.0	0.046	12.4	0.0	2.3	3	0	0	3	3	3	0	TIP49	C-terminus
PhoH	PF02562.11	gi|479325725|ref|YP_007865780.1|	-	0.06	12.5	0.0	0.14	11.3	0.0	1.6	1	0	0	1	1	1	0	PhoH-like	protein
TetR_C_7	PF14246.1	gi|479325725|ref|YP_007865780.1|	-	0.13	12.4	0.0	0.44	10.8	0.0	1.9	2	0	0	2	2	1	0	AefR-like	transcriptional	repressor,	C-terminal	region
ATP-synt_ab	PF00006.20	gi|479325725|ref|YP_007865780.1|	-	0.15	11.5	0.0	0.22	11.0	0.0	1.2	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
DUF4473	PF14747.1	gi|479325726|ref|YP_007865781.1|	-	0.053	13.7	0.1	0.061	13.5	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4473)
DUF2075	PF09848.4	gi|479325727|ref|YP_007865782.1|	-	5.4e-62	209.8	0.0	8.5e-62	209.1	0.0	1.3	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
ResIII	PF04851.10	gi|479325727|ref|YP_007865782.1|	-	0.00012	21.9	0.2	0.0015	18.3	0.0	2.4	1	1	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
PIF1	PF05970.9	gi|479325727|ref|YP_007865782.1|	-	0.00059	18.8	0.0	0.0016	17.4	0.0	1.7	1	0	0	1	1	1	1	PIF1-like	helicase
AAA_16	PF13191.1	gi|479325727|ref|YP_007865782.1|	-	0.002	18.1	0.0	0.0061	16.5	0.0	1.8	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|479325727|ref|YP_007865782.1|	-	0.0033	17.5	0.0	0.012	15.6	0.0	2.1	1	1	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.12	gi|479325727|ref|YP_007865782.1|	-	0.0033	16.8	0.0	0.0066	15.8	0.0	1.5	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
NERD	PF08378.6	gi|479325727|ref|YP_007865782.1|	-	0.0047	17.1	0.7	0.032	14.4	0.1	2.7	3	0	0	3	3	2	1	Nuclease-related	domain
PhoH	PF02562.11	gi|479325727|ref|YP_007865782.1|	-	0.006	15.8	1.0	0.17	11.0	0.0	2.3	2	0	0	2	2	2	1	PhoH-like	protein
Zot	PF05707.7	gi|479325727|ref|YP_007865782.1|	-	0.014	14.8	0.0	0.035	13.5	0.0	1.7	2	0	0	2	2	2	0	Zonular	occludens	toxin	(Zot)
DEAD	PF00270.24	gi|479325727|ref|YP_007865782.1|	-	0.016	14.6	0.1	7.2	6.0	0.0	2.9	3	1	1	4	4	4	0	DEAD/DEAH	box	helicase
Sigma54_activat	PF00158.21	gi|479325727|ref|YP_007865782.1|	-	0.018	14.5	0.0	0.036	13.5	0.0	1.4	1	0	0	1	1	1	0	Sigma-54	interaction	domain
AAA_14	PF13173.1	gi|479325727|ref|YP_007865782.1|	-	0.03	14.2	0.1	0.16	11.8	0.1	2.2	1	1	0	1	1	1	0	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|479325727|ref|YP_007865782.1|	-	0.038	13.4	0.0	0.086	12.3	0.0	1.5	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
AAA_29	PF13555.1	gi|479325727|ref|YP_007865782.1|	-	0.088	12.3	0.0	0.17	11.4	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
Ribosomal_S5_C	PF03719.10	gi|479325727|ref|YP_007865782.1|	-	0.12	11.6	0.0	0.57	9.5	0.0	2.0	2	0	0	2	2	2	0	Ribosomal	protein	S5,	C-terminal	domain
T2SE	PF00437.15	gi|479325727|ref|YP_007865782.1|	-	0.15	10.9	0.0	0.2	10.5	0.0	1.2	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_10	PF12846.2	gi|479325727|ref|YP_007865782.1|	-	0.17	11.2	1.3	0.72	9.2	0.4	2.4	2	1	0	2	2	2	0	AAA-like	domain
CARDB	PF07705.6	gi|479325729|ref|YP_007865784.1|	-	1.2e-06	28.4	8.3	6.7e-05	22.8	0.5	2.5	1	1	0	2	2	2	2	CARDB
NPCBM_assoc	PF10633.4	gi|479325729|ref|YP_007865784.1|	-	0.0036	17.3	0.6	0.097	12.7	0.1	2.7	2	1	0	2	2	2	1	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
Wzt_C	PF14524.1	gi|479325729|ref|YP_007865784.1|	-	0.0076	15.9	3.2	0.033	13.8	0.4	2.5	2	1	1	3	3	3	1	Wzt	C-terminal	domain
Transglut_C	PF00927.17	gi|479325729|ref|YP_007865784.1|	-	0.022	14.7	0.4	0.073	13.1	0.3	1.9	1	1	0	1	1	1	0	Transglutaminase	family,	C-terminal	ig	like	domain
SBP_bac_7	PF03480.8	gi|479325729|ref|YP_007865784.1|	-	0.058	12.4	0.3	0.23	10.4	0.0	1.8	2	0	0	2	2	2	0	Bacterial	extracellular	solute-binding	protein,	family	7
Rifin_STEVOR	PF02009.11	gi|479325729|ref|YP_007865784.1|	-	0.12	11.9	1.8	0.13	11.9	1.3	1.3	1	1	0	1	1	1	0	Rifin/stevor	family
TRAP_beta	PF05753.9	gi|479325729|ref|YP_007865784.1|	-	0.29	10.2	4.2	0.22	10.6	0.9	2.0	1	1	1	2	2	2	0	Translocon-associated	protein	beta	(TRAPB)
DUF3753	PF12575.3	gi|479325729|ref|YP_007865784.1|	-	0.41	10.4	2.8	0.98	9.2	2.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3753)
Baculo_E56	PF04639.7	gi|479325729|ref|YP_007865784.1|	-	0.43	9.1	2.9	0.73	8.4	2.0	1.3	1	0	0	1	1	1	0	Baculoviral	E56	protein,	specific	to	ODV	envelope
DUF11	PF01345.13	gi|479325729|ref|YP_007865784.1|	-	0.46	10.5	8.1	2.6	8.1	1.0	2.6	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF11
MacB_PCD	PF12704.2	gi|479325730|ref|YP_007865785.1|	-	5.7e-29	101.3	4.4	5.7e-29	101.3	3.1	2.5	3	0	0	3	3	3	1	MacB-like	periplasmic	core	domain
FtsX	PF02687.16	gi|479325730|ref|YP_007865785.1|	-	3.3e-18	65.5	17.9	3.3e-18	65.5	12.4	3.1	2	2	0	2	2	2	1	FtsX-like	permease	family
DUF2628	PF10947.3	gi|479325730|ref|YP_007865785.1|	-	0.045	13.5	0.4	0.045	13.5	0.3	3.2	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF2628)
FAM70	PF14967.1	gi|479325730|ref|YP_007865785.1|	-	0.13	11.4	3.7	0.17	11.0	0.2	2.2	2	0	0	2	2	2	0	FAM70	protein
Glu_synthase	PF01645.12	gi|479325731|ref|YP_007865786.1|	-	9.5e-100	334.0	2.9	2e-96	323.1	1.3	2.1	2	0	0	2	2	2	2	Conserved	region	in	glutamate	synthase
Glu_syn_central	PF04898.9	gi|479325731|ref|YP_007865786.1|	-	1.9e-11	43.7	0.1	6.5e-07	28.8	0.0	3.2	2	1	0	2	2	2	2	Glutamate	synthase	central	domain
FMN_dh	PF01070.13	gi|479325731|ref|YP_007865786.1|	-	5.7e-07	28.7	11.9	7.8e-06	24.9	3.2	3.3	4	0	0	4	4	4	2	FMN-dependent	dehydrogenase
DHO_dh	PF01180.16	gi|479325731|ref|YP_007865786.1|	-	0.0047	15.9	2.2	0.012	14.5	1.5	1.7	1	1	0	1	1	1	1	Dihydroorotate	dehydrogenase
NanE	PF04131.9	gi|479325731|ref|YP_007865786.1|	-	0.0051	15.8	0.2	0.066	12.1	0.1	2.4	2	0	0	2	2	2	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
PcrB	PF01884.12	gi|479325731|ref|YP_007865786.1|	-	0.0095	15.2	4.6	1.4	8.1	0.1	2.8	2	1	1	3	3	3	2	PcrB	family
IMPDH	PF00478.20	gi|479325731|ref|YP_007865786.1|	-	0.04	12.7	2.6	0.54	9.0	3.3	1.7	2	0	0	2	2	2	0	IMP	dehydrogenase	/	GMP	reductase	domain
NMO	PF03060.10	gi|479325731|ref|YP_007865786.1|	-	0.34	10.0	7.6	1.6	7.8	4.5	2.1	1	1	1	2	2	2	0	Nitronate	monooxygenase
GXGXG	PF01493.14	gi|479325732|ref|YP_007865787.1|	-	1.2e-24	86.4	12.3	5e-24	84.4	8.5	2.1	1	1	0	1	1	1	1	GXGXG	motif
GATase_2	PF00310.16	gi|479325732|ref|YP_007865787.1|	-	4.3e-16	58.5	0.0	3e-15	55.7	0.0	2.0	2	0	0	2	2	2	1	Glutamine	amidotransferases	class-II
GATase_6	PF13522.1	gi|479325732|ref|YP_007865787.1|	-	2.9e-15	56.3	0.0	6.2e-15	55.3	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_7	PF13537.1	gi|479325732|ref|YP_007865787.1|	-	5.8e-06	26.0	0.0	2.8e-05	23.8	0.0	2.0	1	1	0	1	1	1	1	Glutamine	amidotransferase	domain
RRM_5	PF13893.1	gi|479325732|ref|YP_007865787.1|	-	0.011	15.5	0.4	0.053	13.3	0.0	2.2	2	0	0	2	2	2	0	RNA	recognition	motif.	(a.k.a.	RRM,	RBD,	or	RNP	domain)
SHOCT	PF09851.4	gi|479325732|ref|YP_007865787.1|	-	0.013	14.9	5.8	0.02	14.3	0.1	2.9	2	0	0	2	2	2	0	Short	C-terminal	domain
RRM_6	PF14259.1	gi|479325732|ref|YP_007865787.1|	-	0.019	14.9	0.0	0.051	13.5	0.0	1.8	1	0	0	1	1	1	0	RNA	recognition	motif	(a.k.a.	RRM,	RBD,	or	RNP	domain)
RRM_1	PF00076.17	gi|479325732|ref|YP_007865787.1|	-	0.082	12.5	0.0	0.35	10.5	0.0	2.1	1	1	0	1	1	1	0	RNA	recognition	motif.	(a.k.a.	RRM,	RBD,	or	RNP	domain)
DUF3662	PF12401.3	gi|479325732|ref|YP_007865787.1|	-	0.12	12.5	0.3	0.31	11.2	0.1	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2662)
NTS	PF15447.1	gi|479325732|ref|YP_007865787.1|	-	0.29	11.5	2.4	1.7	9.0	0.0	2.9	3	0	0	3	3	3	0	N-terminal	segments	of	PfEMP1
Glycos_transf_1	PF00534.15	gi|479325733|ref|YP_007865788.1|	-	2.7e-21	75.7	0.9	5e-21	74.8	0.6	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|479325733|ref|YP_007865788.1|	-	0.0002	21.5	0.0	0.00047	20.3	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|479325733|ref|YP_007865788.1|	-	0.0034	17.1	0.0	0.0055	16.4	0.0	1.5	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
DUF3206	PF11472.3	gi|479325733|ref|YP_007865788.1|	-	0.095	12.4	0.2	0.36	10.6	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3206)
Glycos_transf_2	PF00535.21	gi|479325734|ref|YP_007865789.1|	-	2.9e-11	43.3	0.8	4.3e-11	42.7	0.6	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.4	gi|479325734|ref|YP_007865789.1|	-	4.5e-07	29.2	3.5	1.2e-05	24.5	2.4	2.1	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|479325734|ref|YP_007865789.1|	-	0.00011	21.9	0.4	0.031	13.9	0.2	2.1	1	1	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_tranf_2_3	PF13641.1	gi|479325734|ref|YP_007865789.1|	-	0.00014	21.7	0.1	0.0043	16.8	0.0	2.1	2	0	0	2	2	2	1	Glycosyltransferase	like	family	2
Glyco_transf_8	PF01501.15	gi|479325734|ref|YP_007865789.1|	-	0.0061	15.9	0.8	0.0089	15.3	0.5	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	8
Glyco_tranf_2_4	PF13704.1	gi|479325734|ref|YP_007865789.1|	-	0.0071	16.6	0.1	0.012	15.8	0.1	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.1	gi|479325734|ref|YP_007865789.1|	-	0.0087	15.3	0.1	0.021	14.0	0.1	1.7	2	0	0	2	2	2	1	Glycosyl	transferase	family	21
Amidohydro_1	PF01979.15	gi|479325735|ref|YP_007865790.1|	-	7.5e-34	117.8	0.0	9.6e-34	117.5	0.0	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|479325735|ref|YP_007865790.1|	-	2.6e-13	50.6	0.0	5e-08	33.3	0.0	2.2	2	0	0	2	2	2	2	Amidohydrolase
Amidohydro_3	PF07969.6	gi|479325735|ref|YP_007865790.1|	-	2e-09	37.1	0.2	1.3e-07	31.2	0.0	2.7	3	0	0	3	3	3	1	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|479325735|ref|YP_007865790.1|	-	9e-07	28.6	0.0	3e-06	26.9	0.0	2.0	1	0	0	1	1	1	1	Amidohydrolase
A_deaminase	PF00962.17	gi|479325735|ref|YP_007865790.1|	-	0.00036	19.5	0.0	0.001	18.0	0.0	1.7	2	0	0	2	2	2	1	Adenosine/AMP	deaminase
ATP_bind_4	PF01902.12	gi|479325736|ref|YP_007865791.1|	-	2.4e-57	193.8	0.0	2.7e-57	193.6	0.0	1.0	1	0	0	1	1	1	1	ATP-binding	region
QueC	PF06508.8	gi|479325736|ref|YP_007865791.1|	-	0.006	15.8	0.0	0.017	14.4	0.0	1.9	1	1	0	2	2	2	1	Queuosine	biosynthesis	protein	QueC
NTP_transf_3	PF12804.2	gi|479325737|ref|YP_007865792.1|	-	3e-20	72.9	0.0	3.5e-20	72.6	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
MoeA_N	PF03453.12	gi|479325738|ref|YP_007865793.1|	-	2.6e-44	150.4	0.0	4.2e-44	149.7	0.0	1.3	1	0	0	1	1	1	1	MoeA	N-terminal	region	(domain	I	and	II)
MoCF_biosynth	PF00994.19	gi|479325738|ref|YP_007865793.1|	-	8.6e-20	70.6	0.2	1.4e-19	69.9	0.1	1.3	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
MoeA_C	PF03454.10	gi|479325738|ref|YP_007865793.1|	-	0.0074	16.2	0.0	0.037	13.9	0.0	2.1	2	0	0	2	2	2	1	MoeA	C-terminal	region	(domain	IV)
MobB	PF03205.9	gi|479325739|ref|YP_007865794.1|	-	1.7e-29	102.3	0.3	2.1e-29	102.0	0.2	1.1	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Miro	PF08477.8	gi|479325739|ref|YP_007865794.1|	-	0.0007	20.0	0.0	0.0013	19.2	0.0	1.4	1	0	0	1	1	1	1	Miro-like	protein
AAA_15	PF13175.1	gi|479325739|ref|YP_007865794.1|	-	0.0024	17.0	1.3	0.003	16.6	0.9	1.0	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_16	PF13191.1	gi|479325739|ref|YP_007865794.1|	-	0.012	15.5	0.0	0.02	14.9	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
NTPase_1	PF03266.10	gi|479325739|ref|YP_007865794.1|	-	0.025	14.3	0.2	0.099	12.3	0.0	1.9	2	0	0	2	2	2	0	NTPase
AAA	PF00004.24	gi|479325739|ref|YP_007865794.1|	-	0.028	14.6	0.1	0.051	13.7	0.0	1.7	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
cobW	PF02492.14	gi|479325739|ref|YP_007865794.1|	-	0.057	12.8	0.1	0.085	12.2	0.1	1.3	1	1	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
TrwB_AAD_bind	PF10412.4	gi|479325739|ref|YP_007865794.1|	-	0.069	11.7	0.0	0.1	11.1	0.0	1.1	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
LpxK	PF02606.9	gi|479325739|ref|YP_007865794.1|	-	0.11	11.3	0.0	0.15	10.9	0.0	1.2	1	0	0	1	1	1	0	Tetraacyldisaccharide-1-P	4'-kinase
Arch_ATPase	PF01637.13	gi|479325739|ref|YP_007865794.1|	-	0.12	12.0	0.8	0.15	11.7	0.6	1.4	1	1	0	1	1	1	0	Archaeal	ATPase
CBS	PF00571.23	gi|479325740|ref|YP_007865795.1|	-	4.9e-23	80.6	6.3	2.9e-08	33.3	0.0	4.4	4	1	0	4	4	4	3	CBS	domain
Methyltransf_11	PF08241.7	gi|479325741|ref|YP_007865796.1|	-	5e-17	62.1	0.0	7.9e-17	61.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|479325741|ref|YP_007865796.1|	-	2.7e-09	36.7	0.0	4.8e-09	35.9	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|479325741|ref|YP_007865796.1|	-	1.5e-08	35.0	0.0	2.7e-08	34.1	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|479325741|ref|YP_007865796.1|	-	2.7e-07	30.8	0.0	4.4e-07	30.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|479325741|ref|YP_007865796.1|	-	3.9e-07	29.9	0.0	5.8e-07	29.3	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|479325741|ref|YP_007865796.1|	-	0.00039	19.5	0.0	0.00057	19.0	0.0	1.3	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_18	PF12847.2	gi|479325741|ref|YP_007865796.1|	-	0.016	15.7	0.0	0.037	14.6	0.0	1.6	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_8	PF05148.10	gi|479325741|ref|YP_007865796.1|	-	0.021	14.4	0.0	0.044	13.4	0.0	1.6	2	0	0	2	2	2	0	Hypothetical	methyltransferase
DUF2407_C	PF13373.1	gi|479325742|ref|YP_007865797.1|	-	0.71	9.7	6.3	0.093	12.6	1.0	2.0	2	1	1	3	3	3	0	DUF2407	C-terminal	domain
7tm_3	PF00003.17	gi|479325742|ref|YP_007865797.1|	-	1.4	8.1	10.7	1.5	8.1	1.0	2.0	1	1	0	2	2	2	0	7	transmembrane	sweet-taste	receptor	of	3	GCPR
DUF1705	PF08019.7	gi|479325742|ref|YP_007865797.1|	-	4.9	6.6	8.8	8.3	5.8	0.8	2.3	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF1705)
DUF2892	PF11127.3	gi|479325742|ref|YP_007865797.1|	-	7.6	6.4	9.9	3.1	7.6	1.0	3.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2892)
DUF456	PF04306.8	gi|479325743|ref|YP_007865798.1|	-	0.0014	18.6	3.4	0.0019	18.2	2.4	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF456)
Gly-zipper_OmpA	PF13436.1	gi|479325743|ref|YP_007865798.1|	-	0.048	13.3	2.4	0.062	12.9	1.6	1.1	1	0	0	1	1	1	0	Glycine-zipper	containing	OmpA-like	membrane	domain
Gly-zipper_Omp	PF13488.1	gi|479325743|ref|YP_007865798.1|	-	0.063	12.9	8.2	0.11	12.2	5.7	1.4	1	0	0	1	1	1	0	Glycine	zipper
Bacteriocin_IIc	PF10439.4	gi|479325743|ref|YP_007865798.1|	-	0.064	13.3	5.3	0.13	12.3	3.7	1.5	1	0	0	1	1	1	0	Bacteriocin	class	II	with	double-glycine	leader	peptide
Rick_17kDa_Anti	PF05433.10	gi|479325743|ref|YP_007865798.1|	-	0.066	12.8	12.7	0.1	12.3	8.8	1.3	1	0	0	1	1	1	0	Glycine	zipper	2TM	domain
DUF1269	PF06897.7	gi|479325743|ref|YP_007865798.1|	-	2.2	8.3	5.4	3.1	7.8	3.7	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1269)
PP_kinase_C	PF13090.1	gi|479325744|ref|YP_007865799.1|	-	0.02	13.5	0.1	0.022	13.3	0.0	1.1	1	0	0	1	1	1	0	Polyphosphate	kinase	C-terminal	domain
DUF2232	PF09991.4	gi|479325744|ref|YP_007865799.1|	-	0.086	11.8	0.1	0.091	11.7	0.0	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2232)
Fe_dep_repr_C	PF02742.10	gi|479325745|ref|YP_007865800.1|	-	7.4e-28	96.0	1.2	1.2e-27	95.4	0.2	1.8	2	0	0	2	2	2	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
Fe_dep_repress	PF01325.14	gi|479325745|ref|YP_007865800.1|	-	6e-12	45.3	0.4	8.2e-11	41.6	0.1	2.8	3	0	0	3	3	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
MarR	PF01047.17	gi|479325745|ref|YP_007865800.1|	-	1.7e-08	34.0	0.0	7.4e-08	31.9	0.0	2.0	2	0	0	2	2	2	1	MarR	family
HTH_45	PF14947.1	gi|479325745|ref|YP_007865800.1|	-	2.3e-07	30.5	0.4	5.6e-07	29.2	0.3	1.7	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_24	PF13412.1	gi|479325745|ref|YP_007865800.1|	-	2.3e-07	30.0	0.3	4.1e-06	26.0	0.1	2.6	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.2	gi|479325745|ref|YP_007865800.1|	-	2.7e-07	30.1	0.1	1.5e-06	27.7	0.0	2.2	3	0	0	3	3	2	1	MarR	family
HTH_5	PF01022.15	gi|479325745|ref|YP_007865800.1|	-	2.8e-07	30.0	0.0	6.3e-07	28.9	0.0	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_27	PF13463.1	gi|479325745|ref|YP_007865800.1|	-	1.4e-06	28.5	0.1	4.5e-06	26.8	0.0	1.9	2	0	0	2	2	1	1	Winged	helix	DNA-binding	domain
HTH_DeoR	PF08220.7	gi|479325745|ref|YP_007865800.1|	-	1.7e-05	24.2	0.0	3.7e-05	23.1	0.0	1.6	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
HTH_41	PF14502.1	gi|479325745|ref|YP_007865800.1|	-	3.5e-05	23.3	0.1	0.00084	18.8	0.0	2.5	2	0	0	2	2	2	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|479325745|ref|YP_007865800.1|	-	8.6e-05	22.1	0.1	0.00023	20.8	0.1	1.7	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
GntR	PF00392.16	gi|479325745|ref|YP_007865800.1|	-	8.8e-05	21.8	0.0	0.00054	19.3	0.0	2.4	2	0	0	2	2	1	1	Bacterial	regulatory	proteins,	gntR	family
FeoC	PF09012.5	gi|479325745|ref|YP_007865800.1|	-	0.00028	20.5	0.1	0.00052	19.6	0.1	1.5	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
DUF2250	PF10007.4	gi|479325745|ref|YP_007865800.1|	-	0.00047	20.0	0.3	0.00099	18.9	0.2	1.6	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
FeoA	PF04023.9	gi|479325745|ref|YP_007865800.1|	-	0.00059	19.7	0.8	0.002	18.0	0.4	2.1	2	1	0	2	2	2	1	FeoA	domain
DUF4423	PF14394.1	gi|479325745|ref|YP_007865800.1|	-	0.00061	19.3	0.1	0.0011	18.5	0.1	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
Phage_rep_org_N	PF09681.5	gi|479325745|ref|YP_007865800.1|	-	0.00072	19.1	0.1	0.0013	18.3	0.0	1.4	1	0	0	1	1	1	1	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
HTH_Crp_2	PF13545.1	gi|479325745|ref|YP_007865800.1|	-	0.00076	19.2	0.6	0.0019	17.9	0.0	1.9	2	0	0	2	2	1	1	Crp-like	helix-turn-helix	domain
HTH_36	PF13730.1	gi|479325745|ref|YP_007865800.1|	-	0.0012	18.9	0.1	0.0024	17.9	0.1	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
B-block_TFIIIC	PF04182.7	gi|479325745|ref|YP_007865800.1|	-	0.0014	18.4	0.0	0.0031	17.3	0.0	1.5	1	0	0	1	1	1	1	B-block	binding	subunit	of	TFIIIC
HTH_20	PF12840.2	gi|479325745|ref|YP_007865800.1|	-	0.0016	18.1	0.0	0.0044	16.7	0.0	1.8	1	0	0	1	1	1	1	Helix-turn-helix	domain
PadR	PF03551.9	gi|479325745|ref|YP_007865800.1|	-	0.0038	16.9	0.2	0.018	14.8	0.0	2.2	2	1	1	3	3	3	1	Transcriptional	regulator	PadR-like	family
HTH_1	PF00126.22	gi|479325745|ref|YP_007865800.1|	-	0.012	15.3	0.0	0.042	13.5	0.0	1.9	1	1	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
Ribosomal_S19e	PF01090.14	gi|479325745|ref|YP_007865800.1|	-	0.013	14.9	0.0	0.02	14.3	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	protein	S19e
HTH_34	PF13601.1	gi|479325745|ref|YP_007865800.1|	-	0.015	15.3	0.1	0.033	14.2	0.1	1.6	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
AAA_assoc_C	PF09821.4	gi|479325745|ref|YP_007865800.1|	-	0.017	15.3	0.1	0.027	14.7	0.0	1.4	1	0	0	1	1	1	0	C-terminal	AAA-associated	domain
HTH_11	PF08279.7	gi|479325745|ref|YP_007865800.1|	-	0.018	14.6	0.3	0.17	11.5	0.0	2.6	2	1	1	3	3	3	0	HTH	domain
Mrr_N	PF14338.1	gi|479325745|ref|YP_007865800.1|	-	0.019	15.0	0.2	0.056	13.5	0.0	1.8	2	0	0	2	2	1	0	Mrr	N-terminal	domain
Rrf2	PF02082.15	gi|479325745|ref|YP_007865800.1|	-	0.021	14.9	0.1	0.077	13.1	0.0	1.9	2	0	0	2	2	2	0	Transcriptional	regulator
HTH_29	PF13551.1	gi|479325745|ref|YP_007865800.1|	-	0.03	14.4	0.2	0.18	11.9	0.1	2.0	2	0	0	2	2	2	0	Winged	helix-turn	helix
HTH_28	PF13518.1	gi|479325745|ref|YP_007865800.1|	-	0.036	14.0	0.0	0.17	11.8	0.0	2.1	1	1	1	2	2	1	0	Helix-turn-helix	domain
HrcA_DNA-bdg	PF03444.10	gi|479325745|ref|YP_007865800.1|	-	0.041	13.3	0.0	0.12	11.8	0.0	1.8	1	0	0	1	1	1	0	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
hSH3	PF14603.1	gi|479325745|ref|YP_007865800.1|	-	0.049	13.6	0.2	0.47	10.4	0.1	2.2	2	0	0	2	2	2	0	Helically-extended	SH3	domain
EAP30	PF04157.11	gi|479325745|ref|YP_007865800.1|	-	0.062	12.4	0.0	0.14	11.3	0.0	1.5	2	0	0	2	2	2	0	EAP30/Vps36	family
DUF4393	PF14337.1	gi|479325745|ref|YP_007865800.1|	-	0.066	12.6	0.2	0.098	12.0	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4393)
DUF4364	PF14277.1	gi|479325745|ref|YP_007865800.1|	-	0.066	12.8	0.0	0.14	11.7	0.0	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4364)
RPA_C	PF08784.6	gi|479325745|ref|YP_007865800.1|	-	0.16	12.4	0.0	3.5	8.0	0.0	2.3	2	0	0	2	2	2	0	Replication	protein	A	C	terminal
Antitoxin-MazE	PF04014.13	gi|479325745|ref|YP_007865800.1|	-	0.34	10.7	3.3	0.18	11.5	0.5	2.0	2	0	0	2	2	2	0	Antidote-toxin	recognition	MazE
DUF2250	PF10007.4	gi|479325746|ref|YP_007865801.1|	-	3e-05	23.8	0.2	7.8e-05	22.5	0.1	1.7	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF4147	PF13660.1	gi|479325747|ref|YP_007865802.1|	-	2.2e-55	187.3	0.0	3.1e-55	186.9	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4147)
MOFRL	PF05161.8	gi|479325747|ref|YP_007865802.1|	-	2.5e-32	111.1	0.2	8.3e-32	109.4	0.2	1.9	2	0	0	2	2	2	1	MOFRL	family
Oxidored_q6	PF01058.17	gi|479325748|ref|YP_007865803.1|	-	7.2e-20	70.9	0.0	9.5e-20	70.5	0.0	1.2	1	0	0	1	1	1	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
Sua5_yciO_yrdC	PF01300.13	gi|479325749|ref|YP_007865804.1|	-	4.5e-57	192.1	0.1	6.6e-57	191.6	0.0	1.3	1	0	0	1	1	1	1	Telomere	recombination
SUA5	PF03481.8	gi|479325749|ref|YP_007865804.1|	-	3.8e-28	98.0	0.0	7.9e-28	97.0	0.0	1.5	1	0	0	1	1	1	1	Putative	GTP-binding	controlling	metal-binding
Glyco_trans_4_2	PF13477.1	gi|479325749|ref|YP_007865804.1|	-	2.3e-05	24.2	0.1	4.2e-05	23.4	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	4-like
Oxidored_nitro	PF00148.14	gi|479325749|ref|YP_007865804.1|	-	0.012	14.3	0.0	0.018	13.7	0.0	1.1	1	0	0	1	1	1	0	Nitrogenase	component	1	type	Oxidoreductase
Glyco_transf_28	PF03033.15	gi|479325749|ref|YP_007865804.1|	-	0.065	12.9	0.0	0.25	11.0	0.0	1.9	2	0	0	2	2	2	0	Glycosyltransferase	family	28	N-terminal	domain
UPF0180	PF03698.8	gi|479325749|ref|YP_007865804.1|	-	0.15	11.9	0.3	0.69	9.7	0.0	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0180)
BPL_LplA_LipB	PF03099.14	gi|479325750|ref|YP_007865805.1|	-	8.8e-23	80.6	0.0	1.3e-22	80.0	0.0	1.2	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
Tn7_Tnp_TnsA_C	PF08721.6	gi|479325750|ref|YP_007865805.1|	-	0.031	14.3	0.0	0.077	13.0	0.0	1.6	1	0	0	1	1	1	0	TnsA	endonuclease	C	terminal
DUF3781	PF12636.2	gi|479325750|ref|YP_007865805.1|	-	0.035	14.0	0.7	0.1	12.5	0.2	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3781)
PmbA_TldD	PF01523.11	gi|479325751|ref|YP_007865806.1|	-	1.1e-33	116.7	0.2	1.6e-33	116.2	0.1	1.2	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
PmbA_TldD	PF01523.11	gi|479325752|ref|YP_007865807.1|	-	5.9e-45	153.7	2.2	7.6e-45	153.4	1.5	1.1	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
NikR_C	PF08753.6	gi|479325753|ref|YP_007865808.1|	-	2.4e-23	81.8	0.8	3.3e-23	81.3	0.5	1.2	1	0	0	1	1	1	1	NikR	C	terminal	nickel	binding	domain
RHH_1	PF01402.16	gi|479325753|ref|YP_007865808.1|	-	7.2e-05	22.5	0.0	0.00016	21.3	0.0	1.6	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
DUF2811	PF10929.3	gi|479325753|ref|YP_007865808.1|	-	0.0013	18.7	0.0	0.0022	17.9	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2811)
DUF3877	PF12993.2	gi|479325753|ref|YP_007865808.1|	-	0.0052	16.3	0.4	0.0079	15.7	0.3	1.4	1	1	0	1	1	1	1	Domain	of	unknown	function,	E.	rectale	Gene	description	(DUF3877)
RHH_3	PF12651.2	gi|479325753|ref|YP_007865808.1|	-	0.008	15.8	0.5	0.023	14.4	0.1	2.0	2	0	0	2	2	2	1	Ribbon-helix-helix	domain
YscJ_FliF	PF01514.12	gi|479325753|ref|YP_007865808.1|	-	0.1	11.7	0.0	3.3	6.8	0.0	2.2	2	0	0	2	2	2	0	Secretory	protein	of	YscJ/FliF	family
Urm1	PF09138.6	gi|479325753|ref|YP_007865808.1|	-	0.11	12.6	0.1	0.16	12.0	0.1	1.2	1	0	0	1	1	1	0	Urm1	(Ubiquitin	related	modifier)
B3_4	PF03483.12	gi|479325754|ref|YP_007865809.1|	-	2.2e-31	108.6	0.0	3.5e-31	108.0	0.0	1.3	1	0	0	1	1	1	1	B3/4	domain
Homoserine_dh	PF00742.14	gi|479325755|ref|YP_007865810.1|	-	1.2e-50	171.7	0.0	1.6e-50	171.2	0.0	1.2	1	0	0	1	1	1	1	Homoserine	dehydrogenase
NAD_binding_3	PF03447.11	gi|479325755|ref|YP_007865810.1|	-	2.3e-12	47.3	0.0	5e-12	46.2	0.0	1.6	1	0	0	1	1	1	1	Homoserine	dehydrogenase,	NAD	binding	domain
SLH	PF00395.15	gi|479325755|ref|YP_007865810.1|	-	0.092	12.5	0.0	0.5	10.1	0.0	2.3	1	0	0	1	1	1	0	S-layer	homology	domain
UbiA	PF01040.13	gi|479325756|ref|YP_007865811.1|	-	1.3e-22	80.2	28.0	1.6e-22	79.9	19.4	1.0	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
DUF2273	PF10031.4	gi|479325756|ref|YP_007865811.1|	-	0.0011	18.4	4.3	0.0011	18.4	3.0	4.9	5	1	0	5	5	5	2	Small	integral	membrane	protein	(DUF2273)
G0-G1_switch_2	PF15103.1	gi|479325756|ref|YP_007865811.1|	-	0.29	11.3	1.4	0.36	11.0	0.1	1.8	2	0	0	2	2	2	0	G0/G1	switch	protein	2
ECH	PF00378.15	gi|479325758|ref|YP_007865813.1|	-	7.6e-68	228.2	0.0	8.2e-68	228.1	0.0	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
SDH_sah	PF01972.11	gi|479325758|ref|YP_007865813.1|	-	0.0097	14.7	0.0	0.26	10.0	0.0	2.1	2	0	0	2	2	2	2	Serine	dehydrogenase	proteinase
DUF496	PF04363.7	gi|479325758|ref|YP_007865813.1|	-	0.065	13.0	0.1	0.84	9.4	0.0	2.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF496)
Radical_SAM	PF04055.16	gi|479325759|ref|YP_007865814.1|	-	1.8e-19	70.5	0.2	2.6e-18	66.7	0.0	2.5	3	0	0	3	3	3	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|479325759|ref|YP_007865814.1|	-	0.0011	19.1	0.0	0.0028	17.7	0.0	1.7	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
zf-ribbon_3	PF13248.1	gi|479325759|ref|YP_007865814.1|	-	0.0016	17.6	0.7	0.0016	17.6	0.5	2.6	3	1	0	3	3	3	1	zinc-ribbon	domain
UPF0547	PF10571.4	gi|479325759|ref|YP_007865814.1|	-	0.01	15.5	0.0	0.027	14.1	0.0	1.8	1	1	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
DZR	PF12773.2	gi|479325759|ref|YP_007865814.1|	-	0.038	13.8	0.0	0.038	13.8	0.0	2.8	3	0	0	3	3	3	0	Double	zinc	ribbon
TF_Zn_Ribbon	PF08271.7	gi|479325759|ref|YP_007865814.1|	-	0.29	10.5	6.2	0.32	10.3	1.5	2.7	2	1	0	2	2	2	0	TFIIB	zinc-binding
NOB1_Zn_bind	PF08772.6	gi|479325759|ref|YP_007865814.1|	-	0.73	9.7	3.7	2.3	8.1	0.1	2.8	2	1	1	3	3	3	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
DUF309	PF03745.9	gi|479325760|ref|YP_007865815.1|	-	1.6e-17	62.7	0.0	2.2e-17	62.2	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF309)
DUF2851	PF11013.3	gi|479325760|ref|YP_007865815.1|	-	0.039	12.6	0.0	0.045	12.4	0.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2851)
PurS	PF02700.9	gi|479325760|ref|YP_007865815.1|	-	0.073	13.0	0.0	0.14	12.1	0.0	1.5	1	0	0	1	1	1	0	Phosphoribosylformylglycinamidine	(FGAM)	synthase
Adenosine_kin	PF04008.9	gi|479325761|ref|YP_007865816.1|	-	3.4e-79	263.7	0.3	3.9e-79	263.5	0.2	1.0	1	0	0	1	1	1	1	Adenosine	specific	kinase
Y_Y_Y	PF07495.8	gi|479325762|ref|YP_007865817.1|	-	0.17	11.6	4.2	7.7	6.3	0.4	2.9	3	1	0	3	3	3	0	Y_Y_Y	domain
Lipocalin_4	PF13648.1	gi|479325762|ref|YP_007865817.1|	-	1.2	9.7	5.1	3.5	8.2	0.9	2.0	1	1	1	2	2	2	0	Lipocalin-like	domain
VIT1	PF01988.14	gi|479325763|ref|YP_007865818.1|	-	7.2e-12	45.2	18.7	5.3e-11	42.4	12.9	1.9	1	1	0	1	1	1	1	VIT	family
RestrictionSfiI	PF11487.3	gi|479325763|ref|YP_007865818.1|	-	0.082	12.0	0.0	0.15	11.2	0.0	1.4	1	0	0	1	1	1	0	Type	II	restriction	enzyme	SfiI
MgtE	PF01769.11	gi|479325763|ref|YP_007865818.1|	-	1.5	9.1	14.3	0.14	12.4	0.9	2.7	1	1	2	3	3	3	0	Divalent	cation	transporter
Cupin_2	PF07883.6	gi|479325764|ref|YP_007865819.1|	-	1.7e-15	56.2	0.1	2.3e-15	55.8	0.0	1.2	1	0	0	1	1	1	1	Cupin	domain
Cupin_1	PF00190.17	gi|479325764|ref|YP_007865819.1|	-	7.3e-12	44.9	0.0	1.1e-11	44.3	0.0	1.3	1	0	0	1	1	1	1	Cupin
AraC_binding	PF02311.14	gi|479325764|ref|YP_007865819.1|	-	2.2e-08	33.8	0.0	3.4e-08	33.2	0.0	1.2	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
CENP-C_C	PF11699.3	gi|479325764|ref|YP_007865819.1|	-	0.00056	19.8	0.0	0.001	18.9	0.0	1.4	1	0	0	1	1	1	1	Mif2/CENP-C	like
ARD	PF03079.9	gi|479325764|ref|YP_007865819.1|	-	0.002	18.0	1.3	0.0034	17.3	0.1	1.7	2	0	0	2	2	2	1	ARD/ARD'	family
Auxin_BP	PF02041.11	gi|479325764|ref|YP_007865819.1|	-	0.0041	16.5	0.1	0.011	15.2	0.1	1.7	1	1	0	1	1	1	1	Auxin	binding	protein
GPI	PF06560.6	gi|479325764|ref|YP_007865819.1|	-	0.0079	15.2	0.1	0.018	14.0	0.1	1.5	1	1	0	1	1	1	1	Glucose-6-phosphate	isomerase	(GPI)
HTH_23	PF13384.1	gi|479325765|ref|YP_007865820.1|	-	1.4e-08	34.0	0.0	3.2e-08	32.9	0.0	1.6	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.1	gi|479325765|ref|YP_007865820.1|	-	7.6e-08	32.2	0.1	1.5e-07	31.2	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_38	PF13936.1	gi|479325765|ref|YP_007865820.1|	-	1.8e-05	24.2	0.0	2.8e-05	23.5	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
Zn_Tnp_IS1	PF03811.8	gi|479325765|ref|YP_007865820.1|	-	5e-05	22.7	9.3	9.4e-05	21.8	6.4	1.4	1	0	0	1	1	1	1	InsA	N-terminal	domain
Terminase_5	PF06056.7	gi|479325765|ref|YP_007865820.1|	-	9.5e-05	21.8	0.0	0.00019	20.9	0.0	1.5	1	0	0	1	1	1	1	Putative	ATPase	subunit	of	terminase	(gpP-like)
Sigma70_r4_2	PF08281.7	gi|479325765|ref|YP_007865820.1|	-	0.00037	19.8	0.0	0.0007	18.9	0.0	1.4	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_29	PF13551.1	gi|479325765|ref|YP_007865820.1|	-	0.00056	20.0	0.0	0.001	19.1	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_40	PF14493.1	gi|479325765|ref|YP_007865820.1|	-	0.0075	16.4	0.0	0.012	15.7	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
Zn_Tnp_IS1595	PF12760.2	gi|479325765|ref|YP_007865820.1|	-	0.01	15.6	5.2	0.021	14.6	3.6	1.5	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
GerE	PF00196.14	gi|479325765|ref|YP_007865820.1|	-	0.053	12.8	0.0	0.091	12.0	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
HTH_Tnp_IS630	PF01710.11	gi|479325765|ref|YP_007865820.1|	-	0.062	12.9	0.1	0.15	11.7	0.1	1.7	1	0	0	1	1	1	0	Transposase
HTH_7	PF02796.10	gi|479325765|ref|YP_007865820.1|	-	0.1	12.5	0.0	0.22	11.3	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	resolvase
HTH_Tnp_1	PF01527.15	gi|479325765|ref|YP_007865820.1|	-	0.11	12.4	0.0	0.28	11.1	0.0	1.6	1	0	0	1	1	1	0	Transposase
DZR	PF12773.2	gi|479325765|ref|YP_007865820.1|	-	0.2	11.5	3.4	16	5.3	2.8	2.2	1	1	1	2	2	2	0	Double	zinc	ribbon
HTH_Tnp_ISL3	PF13542.1	gi|479325765|ref|YP_007865820.1|	-	0.21	10.7	0.8	0.43	9.7	0.1	2.0	2	1	0	2	2	1	0	Helix-turn-helix	domain	of	transposase	family	ISL3
Zn-ribbon_8	PF09723.5	gi|479325765|ref|YP_007865820.1|	-	0.79	9.7	6.3	2.7	7.9	0.5	2.5	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-ISL3	PF14690.1	gi|479325765|ref|YP_007865820.1|	-	1.6	8.8	9.6	8.7	6.4	0.5	2.7	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Nudix_N_2	PF14803.1	gi|479325765|ref|YP_007865820.1|	-	9.9	5.9	8.2	22	4.8	5.7	1.5	1	0	0	1	1	1	0	Nudix	N-terminal
3HCDH_N	PF02737.13	gi|479325766|ref|YP_007865821.1|	-	3.1e-48	163.7	0.0	4.4e-48	163.3	0.0	1.2	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
3HCDH	PF00725.17	gi|479325766|ref|YP_007865821.1|	-	6.1e-18	65.0	0.1	1.4e-17	63.8	0.1	1.6	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
NAD_binding_2	PF03446.10	gi|479325766|ref|YP_007865821.1|	-	1.8e-05	24.6	0.1	0.00024	20.9	0.0	2.2	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.18	gi|479325766|ref|YP_007865821.1|	-	0.0016	18.1	0.0	0.0032	17.1	0.0	1.5	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
NAD_binding_7	PF13241.1	gi|479325766|ref|YP_007865821.1|	-	0.015	15.5	0.2	0.039	14.2	0.0	1.8	2	0	0	2	2	2	0	Putative	NAD(P)-binding
UDPG_MGDP_dh_N	PF03721.9	gi|479325766|ref|YP_007865821.1|	-	0.017	14.4	0.3	0.037	13.4	0.2	1.7	1	1	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Pyr_redox	PF00070.22	gi|479325766|ref|YP_007865821.1|	-	0.018	15.4	0.1	0.058	13.8	0.1	1.9	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
ApbA	PF02558.11	gi|479325766|ref|YP_007865821.1|	-	0.032	13.6	0.2	0.066	12.6	0.0	1.7	2	0	0	2	2	2	0	Ketopantoate	reductase	PanE/ApbA
Pyr_redox_2	PF07992.9	gi|479325766|ref|YP_007865821.1|	-	0.07	12.9	0.1	0.097	12.5	0.0	1.4	1	1	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
Translin	PF01997.11	gi|479325767|ref|YP_007865822.1|	-	3.4e-23	82.2	0.6	5.6e-23	81.5	0.4	1.3	1	0	0	1	1	1	1	Translin	family
PRD_Mga	PF08270.6	gi|479325767|ref|YP_007865822.1|	-	0.053	12.7	0.2	0.52	9.5	0.1	2.2	1	1	0	1	1	1	0	M	protein	trans-acting	positive	regulator	(MGA)	PRD	domain
TPR_11	PF13414.1	gi|479325767|ref|YP_007865822.1|	-	0.13	11.9	0.3	1.1	8.9	0.0	2.1	2	0	0	2	2	2	0	TPR	repeat
RimK	PF08443.6	gi|479325768|ref|YP_007865823.1|	-	3.6e-45	153.7	0.1	3e-44	150.7	0.0	1.9	2	0	0	2	2	2	1	RimK-like	ATP-grasp	domain
GSH-S_ATP	PF02955.11	gi|479325768|ref|YP_007865823.1|	-	1.3e-10	40.7	0.1	2.6e-10	39.6	0.0	1.5	2	0	0	2	2	2	1	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|479325768|ref|YP_007865823.1|	-	1.1e-09	37.5	0.0	1.5e-09	37.0	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp_3	PF02655.9	gi|479325768|ref|YP_007865823.1|	-	2.1e-09	37.4	0.0	3.8e-09	36.6	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|479325768|ref|YP_007865823.1|	-	2.3e-07	30.7	0.0	3.3e-07	30.2	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp	PF02222.17	gi|479325768|ref|YP_007865823.1|	-	0.0058	15.9	0.0	0.038	13.3	0.0	1.9	2	0	0	2	2	2	1	ATP-grasp	domain
Dala_Dala_lig_C	PF07478.8	gi|479325768|ref|YP_007865823.1|	-	0.017	14.5	0.0	1.6	8.0	0.0	2.3	2	0	0	2	2	2	0	D-ala	D-ala	ligase	C-terminus
CPSase_L_D2	PF02786.12	gi|479325768|ref|YP_007865823.1|	-	0.017	14.4	0.0	0.029	13.6	0.0	1.6	1	1	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
ATP-grasp_5	PF13549.1	gi|479325768|ref|YP_007865823.1|	-	0.017	14.3	0.0	0.04	13.1	0.0	1.6	1	0	0	1	1	1	0	ATP-grasp	domain
TTL	PF03133.10	gi|479325768|ref|YP_007865823.1|	-	0.11	11.4	0.1	0.16	10.8	0.1	1.3	1	0	0	1	1	1	0	Tubulin-tyrosine	ligase	family
CPSase_L_D2	PF02786.12	gi|479325769|ref|YP_007865824.1|	-	3.8e-96	320.4	0.1	4.6e-65	218.8	0.0	2.5	2	0	0	2	2	2	2	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
CPSase_L_D3	PF02787.14	gi|479325769|ref|YP_007865824.1|	-	1.2e-37	128.4	0.4	3.4e-37	126.9	0.3	1.8	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
CPSase_L_chain	PF00289.17	gi|479325769|ref|YP_007865824.1|	-	5.8e-36	122.9	0.0	3.2e-19	69.0	0.0	2.6	2	0	0	2	2	2	2	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
ATP-grasp_4	PF13535.1	gi|479325769|ref|YP_007865824.1|	-	1.3e-32	113.0	0.0	1.2e-17	64.2	0.0	2.4	2	0	0	2	2	2	2	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|479325769|ref|YP_007865824.1|	-	5.4e-24	84.5	0.0	1.7e-12	46.7	0.0	4.1	3	1	0	3	3	3	3	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp	PF02222.17	gi|479325769|ref|YP_007865824.1|	-	7.5e-18	64.4	0.0	3.3e-09	36.3	0.0	2.3	2	0	0	2	2	2	2	ATP-grasp	domain
Dala_Dala_lig_C	PF07478.8	gi|479325769|ref|YP_007865824.1|	-	8.2e-13	48.1	0.6	6.6e-07	28.9	0.0	2.8	2	1	0	2	2	2	2	D-ala	D-ala	ligase	C-terminus
ATP-grasp_3	PF02655.9	gi|479325769|ref|YP_007865824.1|	-	8.6e-09	35.4	1.4	5e-05	23.2	0.1	3.0	2	1	0	2	2	2	2	ATP-grasp	domain
RimK	PF08443.6	gi|479325769|ref|YP_007865824.1|	-	9.2e-08	31.7	0.1	0.00012	21.6	0.0	2.9	2	0	0	2	2	2	2	RimK-like	ATP-grasp	domain
GARS_A	PF01071.14	gi|479325769|ref|YP_007865824.1|	-	3.3e-07	30.0	0.1	9.5e-05	22.0	0.0	2.8	2	1	0	2	2	2	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATP-grasp_5	PF13549.1	gi|479325769|ref|YP_007865824.1|	-	0.00035	19.8	0.1	0.52	9.4	0.0	3.5	2	1	1	3	3	3	2	ATP-grasp	domain
MGS	PF02142.17	gi|479325769|ref|YP_007865824.1|	-	0.0011	18.8	0.3	1.9	8.4	0.0	3.8	3	1	1	4	4	4	1	MGS-like	domain
ATP-grasp_2	PF08442.5	gi|479325769|ref|YP_007865824.1|	-	0.0029	17.0	0.0	0.8	9.0	0.0	3.0	3	0	0	3	3	3	1	ATP-grasp	domain
HTH_23	PF13384.1	gi|479325769|ref|YP_007865824.1|	-	0.0093	15.5	0.0	0.13	11.9	0.0	2.7	2	0	0	2	2	2	1	Homeodomain-like	domain
Octopine_DH	PF02317.12	gi|479325769|ref|YP_007865824.1|	-	0.028	14.0	0.0	0.061	12.9	0.0	1.5	1	0	0	1	1	1	0	NAD/NADP	octopine/nopaline	dehydrogenase,	alpha-helical	domain
CPSase_sm_chain	PF00988.17	gi|479325770|ref|YP_007865825.1|	-	1.4e-48	163.7	0.1	2.1e-48	163.1	0.1	1.3	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	small	chain,	CPSase	domain
GATase	PF00117.23	gi|479325770|ref|YP_007865825.1|	-	8.3e-42	142.8	0.0	1.2e-41	142.3	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|479325770|ref|YP_007865825.1|	-	3.6e-06	26.5	0.1	0.00047	19.6	0.1	2.2	1	1	1	2	2	2	2	Peptidase	C26
Lyase_1	PF00206.15	gi|479325771|ref|YP_007865826.1|	-	1.4e-46	159.1	0.1	2.1e-46	158.5	0.1	1.2	1	0	0	1	1	1	1	Lyase
ASL_C2	PF14698.1	gi|479325771|ref|YP_007865826.1|	-	0.046	13.8	0.0	0.29	11.2	0.0	2.4	3	0	0	3	3	3	0	Argininosuccinate	lyase	C-terminal
DUF769	PF05590.6	gi|479325771|ref|YP_007865826.1|	-	0.057	12.6	0.0	0.11	11.7	0.0	1.4	1	0	0	1	1	1	0	Xylella	fastidiosa	protein	of	unknown	function	(DUF769)
Arginosuc_synth	PF00764.14	gi|479325772|ref|YP_007865827.1|	-	4.4e-146	486.8	0.2	5.1e-146	486.6	0.2	1.0	1	0	0	1	1	1	1	Arginosuccinate	synthase
QueC	PF06508.8	gi|479325772|ref|YP_007865827.1|	-	4.6e-05	22.8	0.1	0.00043	19.6	0.0	2.1	2	0	0	2	2	2	1	Queuosine	biosynthesis	protein	QueC
tRNA_Me_trans	PF03054.11	gi|479325772|ref|YP_007865827.1|	-	0.042	12.4	0.1	0.076	11.5	0.1	1.5	1	1	0	1	1	1	0	tRNA	methyl	transferase
Herpes_env	PF01673.13	gi|479325773|ref|YP_007865828.1|	-	0.0024	16.4	0.0	0.0024	16.4	0.0	1.1	1	0	0	1	1	1	1	Herpesvirus	putative	major	envelope	glycoprotein
PapB	PF03333.8	gi|479325773|ref|YP_007865828.1|	-	0.0077	16.0	0.1	0.044	13.5	0.0	2.0	2	0	0	2	2	2	1	Adhesin	biosynthesis	transcription	regulatory	protein
DUF3505	PF12013.3	gi|479325773|ref|YP_007865828.1|	-	0.027	14.7	0.2	0.041	14.1	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3505)
DUF4423	PF14394.1	gi|479325773|ref|YP_007865828.1|	-	0.046	13.2	0.1	0.082	12.4	0.1	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
AIRS_C	PF02769.17	gi|479325774|ref|YP_007865829.1|	-	7.8e-23	81.1	0.0	2.1e-22	79.7	0.0	1.7	2	1	1	3	3	3	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|479325774|ref|YP_007865829.1|	-	3.3e-16	59.2	0.9	6.2e-16	58.4	0.6	1.5	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
GARS_A	PF01071.14	gi|479325775|ref|YP_007865830.1|	-	1.6e-43	148.5	0.0	2.8e-43	147.7	0.0	1.4	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
GARS_N	PF02844.10	gi|479325775|ref|YP_007865830.1|	-	2.9e-24	85.4	0.0	5.5e-24	84.5	0.0	1.5	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	N	domain
GARS_C	PF02843.11	gi|479325775|ref|YP_007865830.1|	-	2.1e-13	50.2	0.0	4.3e-13	49.2	0.0	1.5	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	C	domain
ATP-grasp_4	PF13535.1	gi|479325775|ref|YP_007865830.1|	-	1.4e-08	34.7	0.0	2.3e-08	33.9	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|479325775|ref|YP_007865830.1|	-	0.00016	20.5	0.0	0.00024	19.9	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
CPSase_L_D2	PF02786.12	gi|479325775|ref|YP_007865830.1|	-	0.0012	18.1	0.0	0.0031	16.8	0.0	1.6	2	0	0	2	2	2	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
DUF1662	PF07878.6	gi|479325775|ref|YP_007865830.1|	-	0.099	12.3	0.0	0.17	11.6	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1662)
Pribosyltran	PF00156.22	gi|479325776|ref|YP_007865831.1|	-	8.2e-18	64.3	0.6	2.7e-17	62.6	0.1	1.9	2	0	0	2	2	2	1	Phosphoribosyl	transferase	domain
PRTase_2	PF15609.1	gi|479325776|ref|YP_007865831.1|	-	0.0014	17.9	0.0	0.0035	16.6	0.0	1.7	1	1	0	1	1	1	1	Phosphoribosyl	transferase
GATase_7	PF13537.1	gi|479325776|ref|YP_007865831.1|	-	0.0059	16.3	0.0	0.011	15.4	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
Pribosyltran	PF00156.22	gi|479325777|ref|YP_007865832.1|	-	2.3e-14	53.1	0.1	4.7e-14	52.1	0.1	1.5	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
GATase_2	PF00310.16	gi|479325777|ref|YP_007865832.1|	-	5.1e-13	48.4	0.0	2.8e-06	26.2	0.0	3.2	2	1	1	3	3	3	3	Glutamine	amidotransferases	class-II
GATase_6	PF13522.1	gi|479325777|ref|YP_007865832.1|	-	1.1e-11	44.8	0.0	2.5e-11	43.6	0.0	1.7	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_7	PF13537.1	gi|479325777|ref|YP_007865832.1|	-	3e-10	39.9	0.0	1.7e-09	37.4	0.0	2.1	1	1	0	1	1	1	1	Glutamine	amidotransferase	domain
PRTase_2	PF15609.1	gi|479325777|ref|YP_007865832.1|	-	0.037	13.3	0.0	0.062	12.5	0.0	1.3	1	0	0	1	1	1	0	Phosphoribosyl	transferase
PRTase_3	PF15610.1	gi|479325777|ref|YP_007865832.1|	-	0.13	11.1	0.2	0.53	9.1	0.0	2.0	2	0	0	2	2	2	0	PRTase	ComF-like
DGF-1_5	PF11038.3	gi|479325777|ref|YP_007865832.1|	-	0.22	10.7	0.0	0.34	10.0	0.0	1.2	1	0	0	1	1	1	0	Dispersed	gene	family	protein	1	of	Trypanosoma	cruzi	region	5
AIRS_C	PF02769.17	gi|479325778|ref|YP_007865833.1|	-	6.1e-41	139.9	1.0	2.7e-26	92.4	0.5	2.3	2	0	0	2	2	2	2	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|479325778|ref|YP_007865833.1|	-	6.9e-38	128.7	3.2	3.4e-25	88.1	0.2	2.5	2	0	0	2	2	2	2	AIR	synthase	related	protein,	N-terminal	domain
GATase_5	PF13507.1	gi|479325779|ref|YP_007865834.1|	-	6.2e-44	149.8	0.0	7.8e-44	149.5	0.0	1.0	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
DJ-1_PfpI	PF01965.19	gi|479325779|ref|YP_007865834.1|	-	1e-09	38.0	0.0	1.4e-09	37.5	0.0	1.4	1	0	0	1	1	1	1	DJ-1/PfpI	family
GATase_3	PF07685.9	gi|479325779|ref|YP_007865834.1|	-	2.9e-08	33.4	0.1	6.7e-08	32.2	0.0	1.6	2	0	0	2	2	2	1	CobB/CobQ-like	glutamine	amidotransferase	domain
GATase	PF00117.23	gi|479325779|ref|YP_007865834.1|	-	2.3e-07	30.4	0.0	3.2e-07	29.9	0.0	1.3	1	1	0	1	1	1	1	Glutamine	amidotransferase	class-I
DUF4066	PF13278.1	gi|479325779|ref|YP_007865834.1|	-	9.7e-05	21.6	0.0	0.00019	20.7	0.0	1.4	1	0	0	1	1	1	1	Putative	amidotransferase
Peptidase_C26	PF07722.8	gi|479325779|ref|YP_007865834.1|	-	0.012	15.0	0.2	0.048	13.1	0.1	1.9	1	1	0	1	1	1	0	Peptidase	C26
PurS	PF02700.9	gi|479325780|ref|YP_007865835.1|	-	3.6e-20	71.7	1.3	4.1e-20	71.5	0.9	1.0	1	0	0	1	1	1	1	Phosphoribosylformylglycinamidine	(FGAM)	synthase
DUF2153	PF09921.4	gi|479325780|ref|YP_007865835.1|	-	0.017	14.7	0.0	0.018	14.6	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2153)
SAC3	PF12209.3	gi|479325780|ref|YP_007865835.1|	-	0.023	14.7	0.3	0.029	14.4	0.2	1.2	1	0	0	1	1	1	0	Leucine	permease	transcriptional	regulator	helical	domain
DUF1462	PF07315.6	gi|479325780|ref|YP_007865835.1|	-	0.036	14.0	0.4	0.05	13.5	0.3	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1462)
SSV1_ORF_D-335	PF07935.6	gi|479325780|ref|YP_007865835.1|	-	3.9	7.2	5.8	0.79	9.5	0.9	2.0	1	1	1	2	2	2	0	ORF	D-335-like	protein
SAICAR_synt	PF01259.13	gi|479325781|ref|YP_007865836.1|	-	5.1e-52	176.4	1.0	5.6e-52	176.3	0.7	1.0	1	0	0	1	1	1	1	SAICAR	synthetase
tRNA_bind	PF01588.15	gi|479325782|ref|YP_007865837.1|	-	5.8e-26	90.1	0.0	6.9e-26	89.9	0.0	1.1	1	0	0	1	1	1	1	Putative	tRNA	binding	domain
MMR_HSR1	PF01926.18	gi|479325783|ref|YP_007865838.1|	-	1.2e-19	70.3	0.7	2.6e-19	69.3	0.1	1.8	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
NOG1	PF06858.9	gi|479325783|ref|YP_007865838.1|	-	8.3e-15	54.4	0.3	1.6e-14	53.5	0.2	1.5	1	0	0	1	1	1	1	Nucleolar	GTP-binding	protein	1	(NOG1)
FeoB_N	PF02421.13	gi|479325783|ref|YP_007865838.1|	-	2.5e-14	52.8	0.0	4.2e-14	52.1	0.0	1.3	1	0	0	1	1	1	1	Ferrous	iron	transport	protein	B
GTP_EFTU	PF00009.22	gi|479325783|ref|YP_007865838.1|	-	5.8e-07	29.1	1.2	0.00021	20.7	0.2	3.1	2	1	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
Miro	PF08477.8	gi|479325783|ref|YP_007865838.1|	-	8.5e-06	26.2	0.2	6.3e-05	23.4	0.0	2.1	2	0	0	2	2	2	1	Miro-like	protein
PduV-EutP	PF10662.4	gi|479325783|ref|YP_007865838.1|	-	3.3e-05	23.4	0.2	0.00028	20.3	0.0	2.5	2	1	0	2	2	2	1	Ethanolamine	utilisation	-	propanediol	utilisation
SRPRB	PF09439.5	gi|479325783|ref|YP_007865838.1|	-	5.3e-05	22.5	0.2	5.3e-05	22.5	0.1	2.0	2	0	0	2	2	2	1	Signal	recognition	particle	receptor	beta	subunit
AIG1	PF04548.11	gi|479325783|ref|YP_007865838.1|	-	5.4e-05	22.4	0.3	0.0001	21.4	0.1	1.6	2	0	0	2	2	2	1	AIG1	family
Ras	PF00071.17	gi|479325783|ref|YP_007865838.1|	-	0.00022	20.6	0.1	0.00059	19.2	0.0	1.8	2	0	0	2	2	2	1	Ras	family
AAA_17	PF13207.1	gi|479325783|ref|YP_007865838.1|	-	0.00051	20.8	0.1	0.002	18.9	0.0	2.0	2	1	0	2	2	2	1	AAA	domain
MobB	PF03205.9	gi|479325783|ref|YP_007865838.1|	-	0.0028	17.3	0.4	0.024	14.3	0.0	2.3	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NTPase_1	PF03266.10	gi|479325783|ref|YP_007865838.1|	-	0.0069	16.1	0.2	0.026	14.2	0.0	2.1	2	0	0	2	2	2	1	NTPase
AAA_18	PF13238.1	gi|479325783|ref|YP_007865838.1|	-	0.013	15.8	1.3	0.038	14.3	0.0	2.5	2	2	0	2	2	2	0	AAA	domain
DUF258	PF03193.11	gi|479325783|ref|YP_007865838.1|	-	0.02	14.0	0.2	0.16	11.1	0.1	2.3	2	1	0	2	2	2	0	Protein	of	unknown	function,	DUF258
Dynamin_N	PF00350.18	gi|479325783|ref|YP_007865838.1|	-	0.021	14.6	4.7	0.083	12.7	0.1	2.6	2	2	0	3	3	3	0	Dynamin	family
AAA_25	PF13481.1	gi|479325783|ref|YP_007865838.1|	-	0.041	13.2	0.0	0.12	11.7	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
AAA_16	PF13191.1	gi|479325783|ref|YP_007865838.1|	-	0.068	13.1	0.2	0.62	10.0	0.0	2.3	2	1	0	2	2	2	0	AAA	ATPase	domain
AAA_14	PF13173.1	gi|479325783|ref|YP_007865838.1|	-	0.068	13.0	0.1	0.21	11.4	0.0	1.9	2	1	0	2	2	2	0	AAA	domain
DUF327	PF03885.8	gi|479325783|ref|YP_007865838.1|	-	0.12	12.1	4.7	1.8	8.3	0.1	3.2	2	2	2	4	4	4	0	Protein	of	unknown	function	(DUF327)
Arch_ATPase	PF01637.13	gi|479325783|ref|YP_007865838.1|	-	0.2	11.3	6.4	0.053	13.2	0.2	2.9	1	1	1	2	2	2	0	Archaeal	ATPase
DUF310	PF03750.8	gi|479325783|ref|YP_007865838.1|	-	0.38	10.9	3.6	11	6.2	0.1	3.6	3	1	1	4	4	4	0	Protein	of	unknown	function	(DUF310)
CbiA	PF01656.18	gi|479325783|ref|YP_007865838.1|	-	0.99	8.7	5.3	0.54	9.6	0.2	2.4	1	1	0	3	3	3	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Fer4_14	PF13394.1	gi|479325784|ref|YP_007865839.1|	-	3.1e-19	69.1	0.0	5.7e-19	68.2	0.0	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Radical_SAM	PF04055.16	gi|479325784|ref|YP_007865839.1|	-	1.3e-16	61.1	0.1	2.9e-16	60.0	0.1	1.6	1	1	1	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|479325784|ref|YP_007865839.1|	-	1.8e-10	41.0	0.1	3.6e-10	40.1	0.0	1.5	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
TYW3	PF02676.9	gi|479325785|ref|YP_007865840.1|	-	2.3e-49	167.3	0.2	2.7e-49	167.0	0.1	1.0	1	0	0	1	1	1	1	Methyltransferase	TYW3
HTH_5	PF01022.15	gi|479325787|ref|YP_007865842.1|	-	2.1e-10	40.0	0.1	3e-10	39.6	0.0	1.2	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|479325787|ref|YP_007865842.1|	-	8.5e-06	25.4	0.0	1.7e-05	24.5	0.0	1.4	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|479325787|ref|YP_007865842.1|	-	0.00027	20.2	0.5	0.00043	19.6	0.1	1.5	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.14	gi|479325787|ref|YP_007865842.1|	-	0.00061	19.4	0.1	0.0011	18.6	0.0	1.5	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_45	PF14947.1	gi|479325787|ref|YP_007865842.1|	-	0.0017	18.1	0.7	0.0024	17.6	0.5	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_40	PF14493.1	gi|479325787|ref|YP_007865842.1|	-	0.048	13.8	0.0	0.066	13.4	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
POTRA_1	PF08478.5	gi|479325788|ref|YP_007865843.1|	-	0.095	12.7	0.8	0.32	11.0	0.6	1.9	1	1	0	1	1	1	0	POTRA	domain,	FtsQ-type
PhoU	PF01895.14	gi|479325789|ref|YP_007865844.1|	-	1.7e-22	79.6	8.4	3.6e-16	59.3	0.6	2.4	2	0	0	2	2	2	2	PhoU	domain
Antitoxin-MazE	PF04014.13	gi|479325789|ref|YP_007865844.1|	-	1.7e-11	43.5	0.0	3.3e-11	42.6	0.0	1.5	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
Pox_F16	PF04708.7	gi|479325789|ref|YP_007865844.1|	-	0.032	13.5	1.7	0.17	11.1	0.2	2.3	2	0	0	2	2	2	0	Poxvirus	F16	protein
Prok-JAB	PF14464.1	gi|479325790|ref|YP_007865845.1|	-	0.043	13.3	0.1	0.065	12.8	0.0	1.2	1	0	0	1	1	1	0	Prokaryotic	homologs	of	the	JAB	domain
OMPdecase	PF00215.19	gi|479325791|ref|YP_007865846.1|	-	9e-24	84.1	0.0	1.1e-23	83.8	0.0	1.1	1	0	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
Pribosyltran	PF00156.22	gi|479325792|ref|YP_007865847.1|	-	1e-14	54.3	0.8	2.5e-14	53.0	0.6	1.6	1	1	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.1	gi|479325792|ref|YP_007865847.1|	-	0.08	12.1	0.0	0.093	11.9	0.0	1.2	1	0	0	1	1	1	0	Uracil	phosphoribosyltransferase
OTCace_N	PF02729.16	gi|479325793|ref|YP_007865848.1|	-	6.1e-42	142.6	0.0	1.2e-41	141.7	0.0	1.5	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
OTCace	PF00185.19	gi|479325793|ref|YP_007865848.1|	-	3.6e-31	108.1	0.0	6.5e-30	104.0	0.0	2.2	2	0	0	2	2	2	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
PyrI	PF01948.13	gi|479325794|ref|YP_007865849.1|	-	5.6e-36	122.4	2.1	9e-36	121.8	1.4	1.3	1	0	0	1	1	1	1	Aspartate	carbamoyltransferase	regulatory	chain,	allosteric	domain
PyrI_C	PF02748.10	gi|479325794|ref|YP_007865849.1|	-	3.7e-17	61.4	3.5	6e-17	60.8	2.4	1.3	1	0	0	1	1	1	1	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
zf-U1	PF06220.7	gi|479325794|ref|YP_007865849.1|	-	0.068	12.7	0.2	0.12	11.9	0.1	1.4	1	0	0	1	1	1	0	U1	zinc	finger
DHODB_Fe-S_bind	PF10418.4	gi|479325795|ref|YP_007865850.1|	-	3.3e-06	26.4	5.0	4.8e-06	25.9	2.6	1.8	2	0	0	2	2	2	1	Iron-sulfur	cluster	binding	domain	of	dihydroorotate	dehydrogenase	B
Fer2	PF00111.22	gi|479325795|ref|YP_007865850.1|	-	0.099	12.3	0.4	0.2	11.4	0.3	1.5	1	0	0	1	1	1	0	2Fe-2S	iron-sulfur	cluster	binding	domain
Amidohydro_1	PF01979.15	gi|479325796|ref|YP_007865851.1|	-	2.4e-13	50.4	0.0	1.4e-07	31.5	0.0	2.1	2	0	0	2	2	2	2	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|479325796|ref|YP_007865851.1|	-	7.2e-11	42.6	0.0	4.7e-06	26.8	0.0	2.2	2	0	0	2	2	2	2	Amidohydrolase
Amidohydro_5	PF13594.1	gi|479325796|ref|YP_007865851.1|	-	1.6e-06	27.8	0.0	3.4e-06	26.7	0.0	1.5	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|479325796|ref|YP_007865851.1|	-	0.087	12.0	0.0	3.1	6.9	0.0	2.3	2	1	0	2	2	2	0	Amidohydrolase	family
DHO_dh	PF01180.16	gi|479325797|ref|YP_007865852.1|	-	2.1e-45	154.9	2.3	2.9e-45	154.4	1.6	1.2	1	0	0	1	1	1	1	Dihydroorotate	dehydrogenase
Dus	PF01207.12	gi|479325797|ref|YP_007865852.1|	-	0.0011	17.8	0.1	0.0056	15.5	0.0	1.9	1	1	0	1	1	1	1	Dihydrouridine	synthase	(Dus)
NeuB	PF03102.9	gi|479325797|ref|YP_007865852.1|	-	0.027	13.6	0.2	0.15	11.1	0.1	1.9	2	0	0	2	2	2	0	NeuB	family
FMN_dh	PF01070.13	gi|479325797|ref|YP_007865852.1|	-	0.029	13.2	1.7	0.069	11.9	0.3	1.9	2	0	0	2	2	2	0	FMN-dependent	dehydrogenase
IMPDH	PF00478.20	gi|479325797|ref|YP_007865852.1|	-	0.033	13.0	0.3	0.11	11.3	0.1	1.7	2	0	0	2	2	2	0	IMP	dehydrogenase	/	GMP	reductase	domain
His_biosynth	PF00977.16	gi|479325797|ref|YP_007865852.1|	-	0.068	12.4	0.9	0.85	8.8	0.0	2.4	2	1	0	2	2	2	0	Histidine	biosynthesis	protein
NMO	PF03060.10	gi|479325797|ref|YP_007865852.1|	-	0.18	10.9	1.8	0.26	10.4	0.4	1.8	2	0	0	2	2	2	0	Nitronate	monooxygenase
SspH	PF08141.7	gi|479325798|ref|YP_007865853.1|	-	0.03	14.3	1.4	0.046	13.7	0.1	1.8	2	0	0	2	2	2	0	Small	acid-soluble	spore	protein	H	family
RPN7	PF10602.4	gi|479325799|ref|YP_007865854.1|	-	0.0012	18.2	2.4	0.0015	17.9	1.7	1.0	1	0	0	1	1	1	1	26S	proteasome	subunit	RPN7
DUF677	PF05055.7	gi|479325799|ref|YP_007865854.1|	-	0.0033	16.1	0.8	0.0044	15.7	0.6	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF677)
RmuC	PF02646.11	gi|479325799|ref|YP_007865854.1|	-	0.052	12.3	0.9	0.056	12.2	0.7	1.3	1	0	0	1	1	1	0	RmuC	family
DUF2342	PF10103.4	gi|479325799|ref|YP_007865854.1|	-	0.064	12.2	0.3	0.08	11.8	0.1	1.3	1	1	0	1	1	1	0	Uncharacterised	conserved	protein	(DUF2342)
DUF812	PF05667.6	gi|479325799|ref|YP_007865854.1|	-	0.096	11.1	5.8	0.12	10.8	4.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF812)
V_ATPase_I	PF01496.14	gi|479325799|ref|YP_007865854.1|	-	0.096	10.5	2.1	0.09	10.6	1.5	1.1	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
Phage_GP20	PF06810.6	gi|479325799|ref|YP_007865854.1|	-	0.24	10.8	8.1	0.9	8.9	5.6	1.9	1	1	0	1	1	1	0	Phage	minor	structural	protein	GP20
Syntaxin	PF00804.20	gi|479325799|ref|YP_007865854.1|	-	0.38	10.9	7.5	0.69	10.0	4.9	1.7	1	1	0	1	1	1	0	Syntaxin
COG5	PF10392.4	gi|479325799|ref|YP_007865854.1|	-	0.43	10.5	5.7	0.83	9.6	4.0	1.6	1	1	0	1	1	1	0	Golgi	transport	complex	subunit	5
BBP1_C	PF15272.1	gi|479325799|ref|YP_007865854.1|	-	0.44	10.0	8.9	0.091	12.2	0.8	2.1	1	1	1	2	2	2	0	Spindle	pole	body	component	BBP1,	C-terminal
DUF1664	PF07889.7	gi|479325799|ref|YP_007865854.1|	-	0.52	10.1	4.1	0.22	11.3	1.3	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
DUF904	PF06005.7	gi|479325799|ref|YP_007865854.1|	-	0.62	10.4	9.8	0.98	9.7	1.4	2.3	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF904)
DivIC	PF04977.10	gi|479325799|ref|YP_007865854.1|	-	0.68	9.4	8.6	1.2	8.7	0.1	2.6	2	1	1	3	3	3	0	Septum	formation	initiator
NPV_P10	PF05531.7	gi|479325799|ref|YP_007865854.1|	-	0.8	9.9	6.0	3.1	8.1	1.7	2.2	1	1	1	2	2	2	0	Nucleopolyhedrovirus	P10	protein
Seryl_tRNA_N	PF02403.17	gi|479325799|ref|YP_007865854.1|	-	1.5	8.8	6.6	3.7	7.6	0.7	2.0	1	1	1	2	2	2	0	Seryl-tRNA	synthetase	N-terminal	domain
IncA	PF04156.9	gi|479325799|ref|YP_007865854.1|	-	1.7	8.2	9.4	2.7	7.5	6.5	1.3	1	1	0	1	1	1	0	IncA	protein
MarC	PF01914.12	gi|479325800|ref|YP_007865855.1|	-	6.2e-36	123.4	19.3	7.3e-36	123.1	13.4	1.0	1	0	0	1	1	1	1	MarC	family	integral	membrane	protein
DUF3693	PF12472.3	gi|479325800|ref|YP_007865855.1|	-	0.075	12.6	0.1	0.94	9.1	0.0	2.4	2	0	0	2	2	2	0	Phage	related	protein
AsnC_trans_reg	PF01037.16	gi|479325801|ref|YP_007865856.1|	-	3.3e-18	65.1	0.4	5.9e-18	64.3	0.3	1.4	1	0	0	1	1	1	1	AsnC	family
HTH_24	PF13412.1	gi|479325801|ref|YP_007865856.1|	-	1.7e-12	46.5	2.7	4.3e-12	45.2	0.2	2.5	3	0	0	3	3	3	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|479325801|ref|YP_007865856.1|	-	5.7e-12	44.9	3.8	9.3e-12	44.2	2.3	1.7	2	0	0	2	2	1	1	AsnC-type	helix-turn-helix	domain
MarR_2	PF12802.2	gi|479325801|ref|YP_007865856.1|	-	6.5e-07	28.9	0.3	1.1e-06	28.1	0.2	1.4	1	0	0	1	1	1	1	MarR	family
Rrf2	PF02082.15	gi|479325801|ref|YP_007865856.1|	-	0.0012	18.9	0.0	0.0032	17.5	0.0	1.7	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_11	PF08279.7	gi|479325801|ref|YP_007865856.1|	-	0.0013	18.3	0.1	0.0027	17.2	0.1	1.5	1	0	0	1	1	1	1	HTH	domain
HTH_10	PF04967.7	gi|479325801|ref|YP_007865856.1|	-	0.0032	16.9	0.0	0.0063	16.0	0.0	1.4	1	0	0	1	1	1	1	HTH	DNA	binding	domain
MarR	PF01047.17	gi|479325801|ref|YP_007865856.1|	-	0.0034	17.0	0.6	0.0062	16.2	0.1	1.6	2	0	0	2	2	1	1	MarR	family
HTH_23	PF13384.1	gi|479325801|ref|YP_007865856.1|	-	0.0044	16.6	0.0	0.0074	15.9	0.0	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_27	PF13463.1	gi|479325801|ref|YP_007865856.1|	-	0.0046	17.2	0.2	0.014	15.7	0.1	1.8	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_20	PF12840.2	gi|479325801|ref|YP_007865856.1|	-	0.0071	16.1	0.4	0.012	15.4	0.3	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|479325801|ref|YP_007865856.1|	-	0.0096	15.8	0.1	0.025	14.5	0.1	1.6	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_IclR	PF09339.5	gi|479325801|ref|YP_007865856.1|	-	0.015	14.9	0.3	0.024	14.2	0.2	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
TetR_N	PF00440.18	gi|479325801|ref|YP_007865856.1|	-	0.015	14.9	0.0	0.041	13.5	0.0	1.7	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	tetR	family
HTH_38	PF13936.1	gi|479325801|ref|YP_007865856.1|	-	0.022	14.3	0.1	0.054	13.0	0.1	1.7	1	1	0	1	1	1	0	Helix-turn-helix	domain
TetR_C_9	PF14514.1	gi|479325801|ref|YP_007865856.1|	-	0.027	14.3	0.1	0.045	13.5	0.0	1.4	1	1	0	1	1	1	0	Transcriptional	regulator,	TetR,	C-terminal
Sulfolobus_pRN	PF05584.6	gi|479325801|ref|YP_007865856.1|	-	0.051	13.5	0.1	0.12	12.3	0.1	1.5	1	0	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
GntR	PF00392.16	gi|479325801|ref|YP_007865856.1|	-	0.054	12.9	0.2	0.084	12.3	0.1	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
HTH_psq	PF05225.11	gi|479325801|ref|YP_007865856.1|	-	0.056	13.0	0.0	0.096	12.2	0.0	1.3	1	0	0	1	1	1	0	helix-turn-helix,	Psq	domain
mRNA_stabil	PF13929.1	gi|479325801|ref|YP_007865856.1|	-	0.058	12.3	0.2	0.072	12.0	0.1	1.1	1	0	0	1	1	1	0	mRNA	stabilisation
HTH_30	PF13556.1	gi|479325801|ref|YP_007865856.1|	-	0.059	12.9	0.4	0.11	12.1	0.2	1.5	1	1	0	1	1	1	0	PucR	C-terminal	helix-turn-helix	domain
EAP30	PF04157.11	gi|479325801|ref|YP_007865856.1|	-	0.084	12.0	0.0	0.17	11.0	0.0	1.5	1	0	0	1	1	1	0	EAP30/Vps36	family
HTH_7	PF02796.10	gi|479325801|ref|YP_007865856.1|	-	0.11	12.4	0.1	4.3	7.2	0.0	2.3	1	1	1	2	2	2	0	Helix-turn-helix	domain	of	resolvase
HTH_Tnp_Tc3_2	PF01498.13	gi|479325801|ref|YP_007865856.1|	-	0.21	11.6	2.1	0.41	10.7	0.4	2.1	2	0	0	2	2	2	0	Transposase
RNA_POL_M_15KD	PF02150.11	gi|479325802|ref|YP_007865857.1|	-	2.8e-09	36.5	3.0	3.3e-09	36.2	1.1	1.9	2	0	0	2	2	2	1	RNA	polymerases	M/15	Kd	subunit
zf-NADH-PPase	PF09297.6	gi|479325802|ref|YP_007865857.1|	-	2.1e-05	23.9	0.5	0.054	13.0	0.0	2.2	2	0	0	2	2	2	2	NADH	pyrophosphatase	zinc	ribbon	domain
zf-TFIIB	PF13453.1	gi|479325802|ref|YP_007865857.1|	-	8.5e-05	21.6	0.8	0.00016	20.8	0.6	1.5	1	0	0	1	1	1	1	Transcription	factor	zinc-finger
DUF2387	PF09526.5	gi|479325802|ref|YP_007865857.1|	-	9.2e-05	22.2	1.8	0.00012	21.9	0.9	1.5	1	1	0	1	1	1	1	Probable	metal-binding	protein	(DUF2387)
Zn_ribbon_recom	PF13408.1	gi|479325802|ref|YP_007865857.1|	-	0.00022	21.4	3.9	0.044	14.0	0.4	2.2	1	1	1	2	2	2	2	Recombinase	zinc	beta	ribbon	domain
IBR	PF01485.16	gi|479325802|ref|YP_007865857.1|	-	0.0018	18.1	0.6	0.0032	17.3	0.4	1.4	1	0	0	1	1	1	1	IBR	domain
DZR	PF12773.2	gi|479325802|ref|YP_007865857.1|	-	0.0033	17.2	0.7	0.0058	16.4	0.5	1.4	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_2	PF13240.1	gi|479325802|ref|YP_007865857.1|	-	0.0034	16.8	4.9	0.77	9.3	1.1	2.5	2	0	0	2	2	2	2	zinc-ribbon	domain
zf-C4_Topoisom	PF01396.14	gi|479325802|ref|YP_007865857.1|	-	0.0038	16.7	4.8	0.19	11.2	0.4	2.3	2	0	0	2	2	2	2	Topoisomerase	DNA	binding	C4	zinc	finger
OrfB_Zn_ribbon	PF07282.6	gi|479325802|ref|YP_007865857.1|	-	0.012	15.3	1.0	0.012	15.3	0.7	1.8	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
zf-C3HC	PF07967.8	gi|479325802|ref|YP_007865857.1|	-	0.027	14.2	0.4	0.03	14.0	0.3	1.2	1	0	0	1	1	1	0	C3HC	zinc	finger-like
zf-ribbon_3	PF13248.1	gi|479325802|ref|YP_007865857.1|	-	0.028	13.6	7.1	0.23	10.6	5.0	2.1	1	1	1	2	2	2	0	zinc-ribbon	domain
Nudix_N_2	PF14803.1	gi|479325802|ref|YP_007865857.1|	-	0.032	13.9	3.2	0.62	9.8	2.8	2.2	1	1	1	2	2	2	0	Nudix	N-terminal
Zn_Tnp_IS1595	PF12760.2	gi|479325802|ref|YP_007865857.1|	-	0.042	13.6	0.9	0.075	12.8	0.6	1.4	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
NOB1_Zn_bind	PF08772.6	gi|479325802|ref|YP_007865857.1|	-	0.051	13.4	2.5	2.9	7.7	0.2	2.3	2	0	0	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
C1_1	PF00130.17	gi|479325802|ref|YP_007865857.1|	-	0.064	13.0	1.5	0.095	12.4	1.0	1.2	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
PhnA_Zn_Ribbon	PF08274.7	gi|479325802|ref|YP_007865857.1|	-	0.085	12.6	0.6	3.1	7.6	0.0	2.2	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
GFA	PF04828.9	gi|479325802|ref|YP_007865857.1|	-	0.1	12.5	1.5	4.7	7.2	0.0	2.3	1	1	1	2	2	2	0	Glutathione-dependent	formaldehyde-activating	enzyme
Lar_restr_allev	PF14354.1	gi|479325802|ref|YP_007865857.1|	-	0.11	12.8	1.0	0.24	11.7	0.7	1.7	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
UPF0547	PF10571.4	gi|479325802|ref|YP_007865857.1|	-	0.12	12.1	4.5	5.2	6.8	0.7	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zf-ISL3	PF14690.1	gi|479325802|ref|YP_007865857.1|	-	0.12	12.4	2.9	1.9	8.5	0.2	2.2	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
RecR	PF02132.10	gi|479325802|ref|YP_007865857.1|	-	0.15	11.5	0.6	12	5.4	0.0	2.8	3	0	0	3	3	3	0	RecR	protein
zf-tcix	PF14952.1	gi|479325802|ref|YP_007865857.1|	-	0.16	11.3	3.9	4	6.8	0.1	2.3	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
Ogr_Delta	PF04606.7	gi|479325802|ref|YP_007865857.1|	-	0.2	11.3	3.8	5.2	6.8	0.0	2.5	3	0	0	3	3	2	0	Ogr/Delta-like	zinc	finger
Cys_rich_CPCC	PF14206.1	gi|479325802|ref|YP_007865857.1|	-	0.26	10.8	1.1	0.82	9.2	0.5	2.0	2	1	0	2	2	2	0	Cysteine-rich	CPCC
YhfH	PF14149.1	gi|479325802|ref|YP_007865857.1|	-	0.47	10.2	4.0	8.4	6.2	0.3	2.6	2	0	0	2	2	2	0	YhfH-like	protein
zinc_ribbon_4	PF13717.1	gi|479325802|ref|YP_007865857.1|	-	0.56	9.9	3.8	1.8	8.3	0.1	2.6	3	0	0	3	3	3	0	zinc-ribbon	domain
FYDLN_acid	PF09538.5	gi|479325802|ref|YP_007865857.1|	-	0.67	10.5	6.7	3.4	8.2	4.6	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(FYDLN_acid)
Auto_anti-p27	PF06677.7	gi|479325802|ref|YP_007865857.1|	-	0.74	9.6	5.5	15	5.4	4.1	2.2	1	1	1	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
A2L_zn_ribbon	PF08792.5	gi|479325802|ref|YP_007865857.1|	-	0.8	9.2	4.7	5.1	6.6	0.3	2.3	1	1	0	2	2	2	0	A2L	zinc	ribbon	domain
DUF2072	PF09845.4	gi|479325802|ref|YP_007865857.1|	-	1.5	8.7	8.5	3.7	7.4	5.9	1.7	1	1	0	1	1	1	0	Zn-ribbon	containing	protein	(DUF2072)
zf-IS66	PF13005.2	gi|479325802|ref|YP_007865857.1|	-	1.8	8.5	8.1	0.8	9.7	0.1	3.1	2	2	1	3	3	3	0	zinc-finger	binding	domain	of	transposase	IS66
DUF1936	PF09151.5	gi|479325802|ref|YP_007865857.1|	-	1.9	8.0	5.9	5.1	6.6	4.1	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1936)
Zn-ribbon_8	PF09723.5	gi|479325802|ref|YP_007865857.1|	-	3.1	7.8	5.5	22	5.0	0.5	2.3	1	1	0	2	2	2	0	Zinc	ribbon	domain
zinc_ribbon_5	PF13719.1	gi|479325802|ref|YP_007865857.1|	-	3.8	7.1	6.8	5.6	6.6	2.0	2.6	2	1	0	2	2	2	0	zinc-ribbon	domain
Radical_SAM	PF04055.16	gi|479325804|ref|YP_007865859.1|	-	1.2e-16	61.3	0.1	3.2e-16	59.9	0.1	1.8	1	0	0	1	1	1	1	Radical	SAM	superfamily
B12-binding	PF02310.14	gi|479325804|ref|YP_007865859.1|	-	0.075	12.9	0.0	0.22	11.3	0.0	1.8	2	0	0	2	2	2	0	B12	binding	domain
tRNA-synt_2b	PF00587.20	gi|479325805|ref|YP_007865860.1|	-	9.2e-38	129.5	0.0	1.6e-37	128.7	0.0	1.4	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
Seryl_tRNA_N	PF02403.17	gi|479325805|ref|YP_007865860.1|	-	2e-22	79.2	13.0	7.7e-22	77.3	8.0	2.4	3	0	0	3	3	3	1	Seryl-tRNA	synthetase	N-terminal	domain
ALIX_LYPXL_bnd	PF13949.1	gi|479325805|ref|YP_007865860.1|	-	0.00029	19.8	6.7	0.0005	19.1	4.7	1.3	1	0	0	1	1	1	1	ALIX	V-shaped	domain	binding	to	HIV
FYRC	PF05965.9	gi|479325805|ref|YP_007865860.1|	-	0.02	14.7	0.1	0.18	11.6	0.0	2.3	2	0	0	2	2	2	0	F/Y	rich	C-terminus
Ribosomal_S4	PF00163.14	gi|479325805|ref|YP_007865860.1|	-	0.029	14.7	1.1	0.058	13.7	0.8	1.5	1	0	0	1	1	1	0	Ribosomal	protein	S4/S9	N-terminal	domain
APG6	PF04111.7	gi|479325805|ref|YP_007865860.1|	-	0.042	12.8	8.2	0.78	8.7	4.7	2.6	3	0	0	3	3	3	0	Autophagy	protein	Apg6
DUF2122	PF09895.4	gi|479325805|ref|YP_007865860.1|	-	0.048	13.8	1.2	1.3	9.2	0.0	2.3	2	0	0	2	2	2	0	RecB-family	nuclease	(DUF2122)
Spectrin	PF00435.16	gi|479325805|ref|YP_007865860.1|	-	0.49	10.7	7.2	0.47	10.7	1.9	2.4	1	1	1	2	2	2	0	Spectrin	repeat
IncA	PF04156.9	gi|479325805|ref|YP_007865860.1|	-	1.1	8.8	7.6	1.7	8.2	5.3	1.2	1	0	0	1	1	1	0	IncA	protein
DUF59	PF01883.14	gi|479325806|ref|YP_007865861.1|	-	3.9e-19	68.3	0.1	6.9e-19	67.6	0.1	1.4	1	1	0	1	1	1	1	Domain	of	unknown	function	DUF59
YqhG	PF11079.3	gi|479325806|ref|YP_007865861.1|	-	0.0093	14.8	0.0	0.049	12.4	0.0	1.8	2	0	0	2	2	2	1	Bacterial	protein	YqhG	of	unknown	function
PRA-CH	PF01502.13	gi|479325807|ref|YP_007865862.1|	-	1.8e-30	104.4	0.0	2e-30	104.2	0.0	1.0	1	0	0	1	1	1	1	Phosphoribosyl-AMP	cyclohydrolase
GATase	PF00117.23	gi|479325808|ref|YP_007865863.1|	-	1.2e-30	106.4	0.0	1.4e-30	106.1	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
GATase_3	PF07685.9	gi|479325808|ref|YP_007865863.1|	-	0.0003	20.4	0.0	0.0014	18.1	0.0	1.8	2	0	0	2	2	2	1	CobB/CobQ-like	glutamine	amidotransferase	domain
SNO	PF01174.14	gi|479325808|ref|YP_007865863.1|	-	0.0069	16.0	0.0	0.35	10.4	0.0	2.0	2	0	0	2	2	2	1	SNO	glutamine	amidotransferase	family
GATase_5	PF13507.1	gi|479325808|ref|YP_007865863.1|	-	0.062	12.1	0.1	0.15	10.9	0.1	1.7	1	1	0	1	1	1	0	CobB/CobQ-like	glutamine	amidotransferase	domain
PRA-PH	PF01503.12	gi|479325809|ref|YP_007865864.1|	-	3e-15	56.2	0.1	3.4e-15	56.0	0.0	1.0	1	0	0	1	1	1	1	Phosphoribosyl-ATP	pyrophosphohydrolase
Histidinol_dh	PF00815.15	gi|479325810|ref|YP_007865865.1|	-	1.2e-123	412.8	4.7	4.3e-123	410.9	3.3	1.7	1	1	0	1	1	1	1	Histidinol	dehydrogenase
DUF945	PF06097.6	gi|479325810|ref|YP_007865865.1|	-	0.031	13.0	0.1	0.049	12.3	0.1	1.2	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF945)
His_biosynth	PF00977.16	gi|479325811|ref|YP_007865866.1|	-	8.8e-82	273.7	4.8	1e-81	273.5	3.3	1.0	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
ThiG	PF05690.9	gi|479325811|ref|YP_007865866.1|	-	5.9e-07	28.8	0.6	0.0015	17.6	0.1	2.1	2	0	0	2	2	2	2	Thiazole	biosynthesis	protein	ThiG
NMO	PF03060.10	gi|479325811|ref|YP_007865866.1|	-	5.8e-06	25.6	1.7	0.0091	15.1	0.1	2.1	2	0	0	2	2	2	2	Nitronate	monooxygenase
Dus	PF01207.12	gi|479325811|ref|YP_007865866.1|	-	2.6e-05	23.2	0.0	0.028	13.2	0.0	2.2	1	1	0	2	2	2	2	Dihydrouridine	synthase	(Dus)
TMP-TENI	PF02581.12	gi|479325811|ref|YP_007865866.1|	-	2.7e-05	23.3	0.3	0.039	13.0	0.0	2.2	2	0	0	2	2	2	2	Thiamine	monophosphate	synthase/TENI
PcrB	PF01884.12	gi|479325811|ref|YP_007865866.1|	-	0.0014	17.9	0.5	0.0055	15.9	0.1	1.9	2	0	0	2	2	2	1	PcrB	family
Glu_synthase	PF01645.12	gi|479325811|ref|YP_007865866.1|	-	0.0041	16.0	0.0	0.0068	15.3	0.0	1.3	1	0	0	1	1	1	1	Conserved	region	in	glutamate	synthase
DHO_dh	PF01180.16	gi|479325811|ref|YP_007865866.1|	-	0.0057	15.6	1.0	0.18	10.7	0.1	2.3	2	0	0	2	2	2	1	Dihydroorotate	dehydrogenase
G3P_antiterm	PF04309.7	gi|479325811|ref|YP_007865866.1|	-	0.012	14.6	0.3	0.34	9.9	0.0	2.3	2	0	0	2	2	2	0	Glycerol-3-phosphate	responsive	antiterminator
IMPDH	PF00478.20	gi|479325811|ref|YP_007865866.1|	-	0.023	13.5	0.4	0.066	12.0	0.1	1.8	2	0	0	2	2	2	0	IMP	dehydrogenase	/	GMP	reductase	domain
FMN_dh	PF01070.13	gi|479325811|ref|YP_007865866.1|	-	0.035	12.9	2.0	0.066	12.0	0.2	2.1	2	1	1	3	3	3	0	FMN-dependent	dehydrogenase
Trp_syntA	PF00290.15	gi|479325811|ref|YP_007865866.1|	-	0.067	11.7	0.3	0.14	10.6	0.2	1.5	2	0	0	2	2	2	0	Tryptophan	synthase	alpha	chain
IGPD	PF00475.13	gi|479325812|ref|YP_007865867.1|	-	5.3e-50	169.0	0.1	6.1e-50	168.8	0.1	1.0	1	0	0	1	1	1	1	Imidazoleglycerol-phosphate	dehydratase
TcdA_TcdB_pore	PF12920.2	gi|479325812|ref|YP_007865867.1|	-	0.022	12.7	0.0	0.025	12.5	0.0	1.1	1	0	0	1	1	1	0	TcdA/TcdB	pore	forming	domain
His_biosynth	PF00977.16	gi|479325813|ref|YP_007865868.1|	-	1e-51	175.4	3.0	1.1e-51	175.2	2.1	1.0	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
PcrB	PF01884.12	gi|479325813|ref|YP_007865868.1|	-	3.1e-06	26.6	3.0	0.0012	18.1	0.0	2.2	2	0	0	2	2	2	2	PcrB	family
HisG	PF01634.13	gi|479325814|ref|YP_007865869.1|	-	2.3e-54	183.3	0.8	3.1e-54	182.9	0.6	1.2	1	0	0	1	1	1	1	ATP	phosphoribosyltransferase
HisG_C	PF08029.6	gi|479325814|ref|YP_007865869.1|	-	2.4e-22	78.6	0.9	9.1e-22	76.8	0.3	2.2	2	0	0	2	2	2	1	HisG,	C-terminal	domain
Aminotran_1_2	PF00155.16	gi|479325815|ref|YP_007865870.1|	-	1.3e-43	149.3	0.0	1.5e-43	149.1	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
IGR	PF09597.5	gi|479325816|ref|YP_007865871.1|	-	0.013	15.3	0.1	0.36	10.7	0.0	2.4	2	0	0	2	2	2	0	IGR	protein	motif
Phage_rep_org_N	PF09681.5	gi|479325816|ref|YP_007865871.1|	-	0.026	14.0	0.2	0.059	12.9	0.2	1.6	1	0	0	1	1	1	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
Mrr_N	PF14338.1	gi|479325816|ref|YP_007865871.1|	-	0.085	12.9	0.1	0.18	11.9	0.1	1.6	1	0	0	1	1	1	0	Mrr	N-terminal	domain
tRNA-synt_1	PF00133.17	gi|479325817|ref|YP_007865872.1|	-	6.4e-53	179.6	0.0	2.4e-52	177.7	0.0	2.0	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|479325817|ref|YP_007865872.1|	-	2.4e-23	82.5	2.9	5.3e-23	81.4	1.5	2.0	1	1	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1_2	PF13603.1	gi|479325817|ref|YP_007865872.1|	-	2.4e-13	49.7	0.5	6.2e-13	48.4	0.0	1.9	2	0	0	2	2	2	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1g	PF09334.6	gi|479325817|ref|YP_007865872.1|	-	1.7e-12	46.7	1.3	4.4e-11	42.0	0.0	3.4	4	0	0	4	4	4	1	tRNA	synthetases	class	I	(M)
tRNA-synt_1e	PF01406.14	gi|479325817|ref|YP_007865872.1|	-	8.7e-09	34.9	1.0	1.6e-08	34.0	0.0	1.9	2	1	1	3	3	3	1	tRNA	synthetases	class	I	(C)	catalytic	domain
YxiJ	PF14176.1	gi|479325817|ref|YP_007865872.1|	-	0.068	13.2	0.1	0.068	13.2	0.1	2.7	3	0	0	3	3	3	0	YxiJ-like	protein
Cob_adeno_trans	PF01923.13	gi|479325818|ref|YP_007865873.1|	-	4.1e-50	169.7	0.0	4.9e-50	169.5	0.0	1.1	1	0	0	1	1	1	1	Cobalamin	adenosyltransferase
ATP_bind_3	PF01171.15	gi|479325819|ref|YP_007865874.1|	-	5.9e-13	48.7	0.0	9.9e-13	47.9	0.0	1.4	1	0	0	1	1	1	1	PP-loop	family
NAD_synthase	PF02540.12	gi|479325819|ref|YP_007865874.1|	-	0.004	16.0	0.0	0.0056	15.6	0.0	1.3	1	0	0	1	1	1	1	NAD	synthase
tRNA_Me_trans	PF03054.11	gi|479325819|ref|YP_007865874.1|	-	0.026	13.1	0.0	0.037	12.5	0.0	1.2	1	0	0	1	1	1	0	tRNA	methyl	transferase
DZR	PF12773.2	gi|479325819|ref|YP_007865874.1|	-	0.034	13.9	10.3	0.066	13.0	0.5	2.9	3	0	0	3	3	3	0	Double	zinc	ribbon
Asn_synthase	PF00733.16	gi|479325819|ref|YP_007865874.1|	-	0.071	12.5	0.0	0.11	11.9	0.0	1.3	1	0	0	1	1	1	0	Asparagine	synthase
PIG-H	PF10181.4	gi|479325819|ref|YP_007865874.1|	-	0.089	12.4	0.0	0.22	11.1	0.0	1.7	1	0	0	1	1	1	0	GPI-GlcNAc	transferase	complex,	PIG-H	component
ThiI	PF02568.9	gi|479325819|ref|YP_007865874.1|	-	0.11	11.9	0.2	0.38	10.1	0.1	1.9	1	1	0	1	1	1	0	Thiamine	biosynthesis	protein	(ThiI)
zf-dskA_traR	PF01258.12	gi|479325819|ref|YP_007865874.1|	-	2	8.2	7.8	44	3.9	0.0	3.2	2	1	0	2	2	2	0	Prokaryotic	dksA/traR	C4-type	zinc	finger
zf-C4pol	PF14260.1	gi|479325819|ref|YP_007865874.1|	-	8.5	6.4	14.1	0.78	9.7	0.5	3.6	3	1	0	3	3	3	0	C4-type	zinc-finger	of	DNA	polymerase	delta
DUF211	PF02680.9	gi|479325820|ref|YP_007865875.1|	-	1.5e-35	120.8	3.8	1.7e-35	120.6	2.6	1.0	1	0	0	1	1	1	1	Uncharacterized	ArCR,	COG1888
AdoMet_dc	PF02675.10	gi|479325821|ref|YP_007865876.1|	-	7.5e-35	119.0	0.0	8.4e-35	118.8	0.0	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	decarboxylase
UbiA	PF01040.13	gi|479325824|ref|YP_007865879.1|	-	2.6e-36	125.1	24.2	3.6e-36	124.7	16.7	1.1	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
Gly-zipper_Omp	PF13488.1	gi|479325824|ref|YP_007865879.1|	-	0.042	13.4	0.8	0.093	12.3	0.6	1.6	1	0	0	1	1	1	0	Glycine	zipper
MMR_HSR1	PF01926.18	gi|479325826|ref|YP_007865881.1|	-	1.8e-15	56.9	0.2	5.1e-12	45.7	0.0	2.2	2	0	0	2	2	2	2	50S	ribosome-binding	GTPase
DUF258	PF03193.11	gi|479325826|ref|YP_007865881.1|	-	1.4e-06	27.5	0.0	2.4e-06	26.8	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
Dynamin_N	PF00350.18	gi|479325826|ref|YP_007865881.1|	-	1.5e-05	24.9	1.1	0.013	15.2	0.0	2.9	3	0	0	3	3	3	2	Dynamin	family
FeoB_N	PF02421.13	gi|479325826|ref|YP_007865881.1|	-	1.7e-05	24.1	0.1	0.018	14.3	0.0	2.5	3	0	0	3	3	3	2	Ferrous	iron	transport	protein	B
Miro	PF08477.8	gi|479325826|ref|YP_007865881.1|	-	0.0029	18.0	0.0	0.013	15.9	0.0	2.0	2	0	0	2	2	2	1	Miro-like	protein
AIG1	PF04548.11	gi|479325826|ref|YP_007865881.1|	-	0.0064	15.6	0.0	0.37	9.8	0.0	2.1	2	0	0	2	2	2	1	AIG1	family
GTP_EFTU	PF00009.22	gi|479325826|ref|YP_007865881.1|	-	0.0071	15.7	0.1	0.12	11.8	0.0	2.1	1	1	1	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
AAA_17	PF13207.1	gi|479325826|ref|YP_007865881.1|	-	0.011	16.5	0.1	0.022	15.5	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
IcmL	PF11393.3	gi|479325826|ref|YP_007865881.1|	-	0.014	15.3	0.0	0.42	10.5	0.0	2.4	2	0	0	2	2	2	0	Macrophage	killing	protein	with	similarity	to	conjugation	protein
AAA_23	PF13476.1	gi|479325826|ref|YP_007865881.1|	-	0.048	13.9	0.4	0.15	12.3	0.1	1.9	1	1	0	1	1	1	0	AAA	domain
KTI12	PF08433.5	gi|479325826|ref|YP_007865881.1|	-	0.082	12.0	0.0	0.13	11.4	0.0	1.3	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
AAA_16	PF13191.1	gi|479325826|ref|YP_007865881.1|	-	0.086	12.8	0.1	0.15	12.0	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
6PF2K	PF01591.13	gi|479325826|ref|YP_007865881.1|	-	0.1	11.6	0.3	4.5	6.2	0.0	2.8	3	0	0	3	3	3	0	6-phosphofructo-2-kinase
Acid_PPase	PF12689.2	gi|479325827|ref|YP_007865882.1|	-	4e-11	42.8	0.1	1e-10	41.5	0.1	1.7	1	1	0	1	1	1	1	Acid	Phosphatase
HAD_2	PF13419.1	gi|479325827|ref|YP_007865882.1|	-	4.3e-08	33.5	0.2	3.7e-07	30.5	0.0	2.2	1	1	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
NIF	PF03031.13	gi|479325827|ref|YP_007865882.1|	-	0.0004	20.0	0.1	0.00052	19.7	0.1	1.2	1	0	0	1	1	1	1	NLI	interacting	factor-like	phosphatase
Hydrolase	PF00702.21	gi|479325827|ref|YP_007865882.1|	-	0.00056	20.3	0.0	0.1	12.9	0.0	2.1	1	1	0	2	2	2	2	haloacid	dehalogenase-like	hydrolase
DUF705	PF05152.7	gi|479325827|ref|YP_007865882.1|	-	0.0012	17.8	0.1	0.006	15.6	0.1	1.9	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF705)
TPP_enzyme_N	PF02776.13	gi|479325828|ref|YP_007865883.1|	-	5.7e-59	198.4	0.0	3.3e-57	192.7	0.0	2.4	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|479325828|ref|YP_007865883.1|	-	1.5e-46	157.7	0.0	8.4e-46	155.3	0.0	2.2	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.17	gi|479325828|ref|YP_007865883.1|	-	4.9e-37	126.7	0.1	2e-36	124.7	0.0	2.1	3	0	0	3	3	3	1	Thiamine	pyrophosphate	enzyme,	central	domain
POR_N	PF01855.14	gi|479325828|ref|YP_007865883.1|	-	0.0008	18.9	0.0	0.0016	18.0	0.0	1.5	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
ACT_5	PF13710.1	gi|479325829|ref|YP_007865884.1|	-	0.0064	16.2	0.0	0.0094	15.7	0.0	1.3	1	0	0	1	1	1	1	ACT	domain
IlvN	PF07991.7	gi|479325830|ref|YP_007865885.1|	-	3.6e-71	237.8	0.1	5.8e-71	237.1	0.0	1.3	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
IlvC	PF01450.14	gi|479325830|ref|YP_007865885.1|	-	1.9e-44	151.0	2.0	2.6e-44	150.6	1.4	1.2	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
F420_oxidored	PF03807.12	gi|479325830|ref|YP_007865885.1|	-	4.2e-09	36.7	0.0	1e-08	35.5	0.0	1.7	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_2	PF03446.10	gi|479325830|ref|YP_007865885.1|	-	1.4e-06	28.1	0.0	4.8e-06	26.5	0.0	1.9	2	1	1	3	3	3	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|479325830|ref|YP_007865885.1|	-	7.7e-06	25.1	0.0	1.6e-05	24.1	0.0	1.5	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_Gly3P_dh_N	PF01210.18	gi|479325830|ref|YP_007865885.1|	-	3.5e-05	23.5	1.4	0.011	15.5	0.2	2.8	2	2	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
AdoHcyase_NAD	PF00670.16	gi|479325830|ref|YP_007865885.1|	-	0.00018	21.3	0.2	0.0039	17.0	0.0	2.1	2	0	0	2	2	2	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
ApbA	PF02558.11	gi|479325830|ref|YP_007865885.1|	-	0.016	14.6	0.1	0.038	13.4	0.1	1.7	1	1	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
PDH	PF02153.12	gi|479325830|ref|YP_007865885.1|	-	0.051	12.4	0.0	0.076	11.8	0.0	1.2	1	0	0	1	1	1	0	Prephenate	dehydrogenase
Oxidored_nitro	PF00148.14	gi|479325830|ref|YP_007865885.1|	-	0.052	12.1	0.1	0.11	11.0	0.0	1.6	2	1	0	2	2	2	0	Nitrogenase	component	1	type	Oxidoreductase
TrkA_N	PF02254.13	gi|479325830|ref|YP_007865885.1|	-	0.076	13.0	0.0	0.18	11.8	0.0	1.7	1	1	0	1	1	1	0	TrkA-N	domain
NAD_binding_10	PF13460.1	gi|479325830|ref|YP_007865885.1|	-	0.094	12.7	0.0	0.17	11.8	0.0	1.7	1	1	0	1	1	1	0	NADH(P)-binding
Shikimate_DH	PF01488.15	gi|479325830|ref|YP_007865885.1|	-	0.13	12.3	0.0	0.41	10.7	0.0	1.8	2	0	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
Hjc	PF01870.13	gi|479325831|ref|YP_007865886.1|	-	1.3e-25	88.8	0.1	2e-25	88.1	0.1	1.3	1	0	0	1	1	1	1	Archaeal	holliday	junction	resolvase	(hjc)
SMC_hinge	PF06470.8	gi|479325831|ref|YP_007865886.1|	-	0.09	12.7	0.0	0.13	12.2	0.0	1.3	1	0	0	1	1	1	0	SMC	proteins	Flexible	Hinge	Domain
T2SE	PF00437.15	gi|479325832|ref|YP_007865887.1|	-	2.1e-10	39.9	0.0	3.3e-10	39.3	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_17	PF13207.1	gi|479325832|ref|YP_007865887.1|	-	4.6e-06	27.4	0.3	2.7e-05	24.9	0.0	2.4	3	1	0	3	3	1	1	AAA	domain
AAA_18	PF13238.1	gi|479325832|ref|YP_007865887.1|	-	0.00058	20.1	0.0	0.00058	20.1	0.0	2.9	4	0	0	4	4	2	1	AAA	domain
IstB_IS21	PF01695.12	gi|479325832|ref|YP_007865887.1|	-	0.0014	18.0	0.0	0.0028	17.1	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
DnaB_C	PF03796.10	gi|479325832|ref|YP_007865887.1|	-	0.0029	16.5	0.0	0.0058	15.5	0.0	1.5	1	0	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
AAA_28	PF13521.1	gi|479325832|ref|YP_007865887.1|	-	0.0035	17.3	0.0	0.0065	16.4	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|479325832|ref|YP_007865887.1|	-	0.0057	16.7	0.0	0.042	13.9	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
NTPase_1	PF03266.10	gi|479325832|ref|YP_007865887.1|	-	0.0059	16.3	1.4	0.13	11.9	0.0	2.8	3	0	0	3	3	3	1	NTPase
RuvB_N	PF05496.7	gi|479325832|ref|YP_007865887.1|	-	0.0065	15.5	0.0	0.036	13.1	0.0	2.1	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_25	PF13481.1	gi|479325832|ref|YP_007865887.1|	-	0.0067	15.8	0.0	0.016	14.5	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|479325832|ref|YP_007865887.1|	-	0.0076	15.9	0.0	0.016	14.9	0.0	1.4	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_14	PF13173.1	gi|479325832|ref|YP_007865887.1|	-	0.0082	16.0	0.0	0.077	12.8	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
AAA	PF00004.24	gi|479325832|ref|YP_007865887.1|	-	0.0093	16.1	0.0	0.028	14.6	0.0	1.9	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.1	gi|479325832|ref|YP_007865887.1|	-	0.012	15.6	0.0	0.021	14.8	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_33	PF13671.1	gi|479325832|ref|YP_007865887.1|	-	0.012	15.4	0.0	0.045	13.6	0.0	2.0	2	0	0	2	2	1	0	AAA	domain
NACHT	PF05729.7	gi|479325832|ref|YP_007865887.1|	-	0.016	14.9	0.0	0.026	14.1	0.0	1.3	1	0	0	1	1	1	0	NACHT	domain
ArgK	PF03308.11	gi|479325832|ref|YP_007865887.1|	-	0.025	13.3	0.0	0.045	12.5	0.0	1.3	1	0	0	1	1	1	0	ArgK	protein
FtsK_SpoIIIE	PF01580.13	gi|479325832|ref|YP_007865887.1|	-	0.026	13.9	0.0	0.052	13.0	0.0	1.4	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
SRP54	PF00448.17	gi|479325832|ref|YP_007865887.1|	-	0.031	13.7	0.3	0.12	11.7	0.0	1.9	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
AAA_5	PF07728.9	gi|479325832|ref|YP_007865887.1|	-	0.035	13.8	0.0	0.12	12.1	0.0	1.9	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
Zeta_toxin	PF06414.7	gi|479325832|ref|YP_007865887.1|	-	0.039	13.0	0.0	0.14	11.1	0.0	1.9	2	0	0	2	2	2	0	Zeta	toxin
KTI12	PF08433.5	gi|479325832|ref|YP_007865887.1|	-	0.061	12.5	0.0	0.14	11.3	0.0	1.5	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
ATP_bind_1	PF03029.12	gi|479325832|ref|YP_007865887.1|	-	0.067	12.7	0.1	0.15	11.6	0.0	1.6	2	0	0	2	2	1	0	Conserved	hypothetical	ATP	binding	protein
RNA_helicase	PF00910.17	gi|479325832|ref|YP_007865887.1|	-	0.085	13.0	0.0	0.23	11.6	0.0	1.9	1	0	0	1	1	1	0	RNA	helicase
Sigma54_activ_2	PF14532.1	gi|479325832|ref|YP_007865887.1|	-	0.15	12.1	0.0	0.37	10.8	0.0	1.6	1	0	0	1	1	1	0	Sigma-54	interaction	domain
SRI	PF08236.6	gi|479325832|ref|YP_007865887.1|	-	1.2	9.1	4.1	0.71	9.8	0.8	2.1	2	0	0	2	2	1	0	SRI	(Set2	Rpb1	interacting)	domain
SNO	PF01174.14	gi|479325833|ref|YP_007865888.1|	-	9.8e-48	162.2	0.0	1.2e-47	161.9	0.0	1.0	1	0	0	1	1	1	1	SNO	glutamine	amidotransferase	family
GATase_3	PF07685.9	gi|479325833|ref|YP_007865888.1|	-	2e-11	43.7	0.3	3.5e-11	42.9	0.2	1.6	1	1	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
Peptidase_S51	PF03575.12	gi|479325833|ref|YP_007865888.1|	-	1.1e-08	34.9	0.0	1.4e-08	34.6	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	S51
GATase	PF00117.23	gi|479325833|ref|YP_007865888.1|	-	2.7e-07	30.2	0.1	3.3e-06	26.6	0.1	2.0	1	1	0	1	1	1	1	Glutamine	amidotransferase	class-I
DJ-1_PfpI	PF01965.19	gi|479325833|ref|YP_007865888.1|	-	0.00019	20.9	0.0	0.00025	20.5	0.0	1.2	1	0	0	1	1	1	1	DJ-1/PfpI	family
DUF4066	PF13278.1	gi|479325833|ref|YP_007865888.1|	-	0.0022	17.2	0.0	0.0035	16.6	0.0	1.3	1	0	0	1	1	1	1	Putative	amidotransferase
Peptidase_C26	PF07722.8	gi|479325833|ref|YP_007865888.1|	-	0.064	12.6	0.7	1.6	8.1	0.3	2.7	1	1	1	2	2	2	0	Peptidase	C26
SOR_SNZ	PF01680.12	gi|479325834|ref|YP_007865889.1|	-	2.2e-97	324.6	3.1	2.9e-97	324.3	2.1	1.1	1	0	0	1	1	1	1	SOR/SNZ	family
ThiG	PF05690.9	gi|479325834|ref|YP_007865889.1|	-	7.7e-06	25.1	3.1	5.1e-05	22.4	0.0	2.5	3	0	0	3	3	3	1	Thiazole	biosynthesis	protein	ThiG
IGPS	PF00218.16	gi|479325834|ref|YP_007865889.1|	-	1.3e-05	24.3	0.0	0.012	14.6	0.0	2.3	2	0	0	2	2	2	2	Indole-3-glycerol	phosphate	synthase
Dus	PF01207.12	gi|479325834|ref|YP_007865889.1|	-	0.0045	15.8	0.1	0.45	9.3	0.0	2.6	2	1	0	2	2	2	1	Dihydrouridine	synthase	(Dus)
OMPdecase	PF00215.19	gi|479325834|ref|YP_007865889.1|	-	0.0076	15.6	0.5	3.9	6.8	0.1	2.7	2	1	1	3	3	3	2	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
NanE	PF04131.9	gi|479325834|ref|YP_007865889.1|	-	0.013	14.4	0.3	0.33	9.8	0.0	2.4	2	1	0	2	2	2	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
His_biosynth	PF00977.16	gi|479325834|ref|YP_007865889.1|	-	0.019	14.2	0.7	2.1	7.5	0.1	2.9	2	2	1	3	3	3	0	Histidine	biosynthesis	protein
PcrB	PF01884.12	gi|479325834|ref|YP_007865889.1|	-	0.02	14.1	0.0	0.062	12.5	0.0	1.8	1	0	0	1	1	1	0	PcrB	family
Trp_syntA	PF00290.15	gi|479325834|ref|YP_007865889.1|	-	0.026	13.0	0.0	0.047	12.2	0.0	1.4	1	0	0	1	1	1	0	Tryptophan	synthase	alpha	chain
NMO	PF03060.10	gi|479325834|ref|YP_007865889.1|	-	0.027	13.6	4.4	0.031	13.4	0.1	2.4	2	1	0	2	2	2	0	Nitronate	monooxygenase
K-box	PF01486.12	gi|479325834|ref|YP_007865889.1|	-	0.072	12.8	0.0	0.6	9.9	0.0	2.3	2	0	0	2	2	2	0	K-box	region
PAP_RNA-bind	PF04926.10	gi|479325834|ref|YP_007865889.1|	-	0.12	11.8	0.0	0.5	9.8	0.0	2.0	1	1	0	1	1	1	0	Poly(A)	polymerase	predicted	RNA	binding	domain
Ribosomal_S26e	PF01283.14	gi|479325835|ref|YP_007865890.1|	-	6.5e-29	100.4	4.5	7.1e-29	100.3	3.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S26e
zf-dskA_traR	PF01258.12	gi|479325835|ref|YP_007865890.1|	-	0.071	12.8	6.2	0.086	12.5	0.3	2.4	2	0	0	2	2	2	0	Prokaryotic	dksA/traR	C4-type	zinc	finger
HECT_2	PF09814.4	gi|479325835|ref|YP_007865890.1|	-	0.12	11.0	0.5	0.15	10.7	0.3	1.3	1	1	0	1	1	1	0	HECT-like	Ubiquitin-conjugating	enzyme	(E2)-binding
Yippee-Mis18	PF03226.9	gi|479325835|ref|YP_007865890.1|	-	0.17	11.9	1.7	2.6	8.1	1.4	2.0	1	1	1	2	2	2	0	Yippee	zinc-binding/DNA-binding	/Mis18,	centromere	assembly
DZR	PF12773.2	gi|479325835|ref|YP_007865890.1|	-	0.2	11.4	5.6	1.5	8.6	3.9	2.1	1	1	0	1	1	1	0	Double	zinc	ribbon
Lar_restr_allev	PF14354.1	gi|479325835|ref|YP_007865890.1|	-	0.31	11.3	4.0	3	8.1	2.8	2.1	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
tRNA-synt_2b	PF00587.20	gi|479325836|ref|YP_007865891.1|	-	4.2e-27	94.8	0.1	8.9e-27	93.7	0.1	1.5	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|479325836|ref|YP_007865891.1|	-	4.7e-18	64.9	0.5	1.1e-17	63.7	0.4	1.7	1	0	0	1	1	1	1	Anticodon	binding	domain
ProRS-C_1	PF09180.6	gi|479325836|ref|YP_007865891.1|	-	2.7e-17	62.4	0.4	6.1e-17	61.3	0.3	1.6	1	0	0	1	1	1	1	Prolyl-tRNA	synthetase,	C-terminal
tRNA-synt_2	PF00152.15	gi|479325836|ref|YP_007865891.1|	-	0.025	13.3	2.9	0.16	10.6	2.0	2.3	1	1	0	1	1	1	0	tRNA	synthetases	class	II	(D,	K	and	N)
ATP-synt_C	PF00137.16	gi|479325837|ref|YP_007865892.1|	-	2.5e-15	56.0	21.4	2.5e-15	56.0	14.8	1.7	2	0	0	2	2	2	1	ATP	synthase	subunit	C
Nitrate_red_gam	PF02665.9	gi|479325837|ref|YP_007865892.1|	-	0.1	11.9	2.4	0.12	11.6	1.7	1.3	1	0	0	1	1	1	0	Nitrate	reductase	gamma	subunit
ATP-synt_D	PF01813.12	gi|479325838|ref|YP_007865893.1|	-	1.1e-52	178.4	7.5	1.3e-52	178.2	5.2	1.0	1	0	0	1	1	1	1	ATP	synthase	subunit	D
GPAT_N	PF14829.1	gi|479325838|ref|YP_007865893.1|	-	0.0006	19.4	1.7	0.0022	17.6	1.0	2.0	1	1	1	2	2	2	1	Glycerol-3-phosphate	acyltransferase	N-terminal
NHR2	PF08788.6	gi|479325838|ref|YP_007865893.1|	-	0.009	15.4	0.0	2.1	7.8	0.0	2.4	2	0	0	2	2	2	2	NHR2	domain	like
ECH	PF00378.15	gi|479325838|ref|YP_007865893.1|	-	0.066	12.3	0.1	0.18	10.9	0.0	1.7	2	0	0	2	2	2	0	Enoyl-CoA	hydratase/isomerase	family
ATP-synt_ab	PF00006.20	gi|479325839|ref|YP_007865894.1|	-	8.7e-61	205.1	0.0	1.2e-60	204.6	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_C	PF00306.22	gi|479325839|ref|YP_007865894.1|	-	4.6e-13	49.6	0.0	9.1e-13	48.6	0.0	1.5	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	chain,	C	terminal	domain
ATP-synt_ab_N	PF02874.18	gi|479325839|ref|YP_007865894.1|	-	1.2e-09	38.2	1.4	2.5e-09	37.1	0.5	2.0	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
HAS-barrel	PF09378.5	gi|479325839|ref|YP_007865894.1|	-	0.00011	22.0	0.1	0.00054	19.8	0.2	2.0	2	0	0	2	2	2	1	HAS	barrel	domain
ATP-synt_ab	PF00006.20	gi|479325840|ref|YP_007865895.1|	-	2.4e-88	295.2	0.0	3.8e-88	294.5	0.0	1.3	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_C	PF00306.22	gi|479325840|ref|YP_007865895.1|	-	3.3e-19	69.4	0.7	6e-19	68.5	0.5	1.4	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	chain,	C	terminal	domain
ATP-synt_ab_N	PF02874.18	gi|479325840|ref|YP_007865895.1|	-	7.6e-14	51.6	1.5	1e-13	51.3	0.3	1.9	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
AAA_22	PF13401.1	gi|479325840|ref|YP_007865895.1|	-	0.032	14.3	0.0	0.093	12.8	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
vATP-synt_E	PF01991.13	gi|479325841|ref|YP_007865896.1|	-	8.6e-13	48.0	14.5	5e-12	45.5	9.7	2.4	1	1	0	1	1	1	1	ATP	synthase	(E/31	kDa)	subunit
Sec3_C	PF09763.4	gi|479325841|ref|YP_007865896.1|	-	0.016	13.4	5.2	0.019	13.1	3.6	1.1	1	0	0	1	1	1	0	Exocyst	complex	component	Sec3
FliH	PF02108.11	gi|479325841|ref|YP_007865896.1|	-	0.016	15.0	1.3	0.18	11.6	0.1	2.3	1	1	1	2	2	2	0	Flagellar	assembly	protein	FliH
Sec16_C	PF12931.2	gi|479325841|ref|YP_007865896.1|	-	0.016	14.9	1.1	3.8	7.1	0.1	2.3	1	1	1	2	2	2	0	Sec23-binding	domain	of	Sec16
RHH_3	PF12651.2	gi|479325841|ref|YP_007865896.1|	-	0.027	14.1	0.6	0.064	13.0	0.4	1.6	1	0	0	1	1	1	0	Ribbon-helix-helix	domain
DUF445	PF04286.7	gi|479325841|ref|YP_007865896.1|	-	0.03	13.8	9.2	0.23	10.9	0.4	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF445)
Sec8_exocyst	PF04048.9	gi|479325841|ref|YP_007865896.1|	-	0.048	13.2	2.4	0.091	12.3	1.6	1.6	1	1	0	1	1	1	0	Sec8	exocyst	complex	component	specific	domain
ACP	PF06857.6	gi|479325841|ref|YP_007865896.1|	-	0.083	12.8	1.1	2.6	7.9	0.1	2.6	2	2	0	2	2	2	0	Malonate	decarboxylase	delta	subunit	(MdcD)
DUF3298	PF11738.3	gi|479325841|ref|YP_007865896.1|	-	0.16	12.4	0.3	3.5	8.2	0.0	2.5	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3298)
MCP_N	PF05581.7	gi|479325841|ref|YP_007865896.1|	-	0.29	11.2	1.8	0.65	10.1	0.1	2.2	2	0	0	2	2	2	0	Vibrio	chemotaxis	protein	N	terminus
Spore_II_R	PF09551.5	gi|479325841|ref|YP_007865896.1|	-	3.3	7.7	9.8	3.4	7.7	1.5	2.3	1	1	1	2	2	2	0	Stage	II	sporulation	protein	R	(spore_II_R)
ATP-synt_F	PF01990.12	gi|479325842|ref|YP_007865897.1|	-	4.9e-16	58.8	0.1	5.4e-16	58.7	0.1	1.0	1	0	0	1	1	1	1	ATP	synthase	(F/14-kDa)	subunit
V_ATPase_I	PF01496.14	gi|479325843|ref|YP_007865898.1|	-	1.7e-65	221.3	16.8	1e-63	215.4	11.6	2.1	1	1	0	1	1	1	1	V-type	ATPase	116kDa	subunit	family
DUF4140	PF13600.1	gi|479325843|ref|YP_007865898.1|	-	0.015	15.7	0.3	0.015	15.7	0.2	2.2	3	0	0	3	3	3	0	N-terminal	domain	of	unknown	function	(DUF4140)
GrpE	PF01025.14	gi|479325843|ref|YP_007865898.1|	-	1.8	8.0	7.7	7.4	6.0	0.3	2.4	2	0	0	2	2	2	0	GrpE
DUF972	PF06156.8	gi|479325843|ref|YP_007865898.1|	-	6.1	7.2	5.5	2.8	8.3	0.4	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF972)
tRNA-synt_1g	PF09334.6	gi|479325844|ref|YP_007865899.1|	-	2.3e-146	487.4	0.1	2.9e-146	487.1	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(M)
tRNA-synt_1	PF00133.17	gi|479325844|ref|YP_007865899.1|	-	8.1e-12	43.9	0.5	1.5e-06	26.5	0.0	3.1	2	1	1	3	3	3	2	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|479325844|ref|YP_007865899.1|	-	2.7e-06	27.2	0.1	5.1e-06	26.3	0.0	1.5	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
DZR	PF12773.2	gi|479325844|ref|YP_007865899.1|	-	0.037	13.8	3.7	0.056	13.2	2.0	1.7	1	1	1	2	2	2	0	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|479325844|ref|YP_007865899.1|	-	0.12	11.5	8.5	0.33	10.2	0.2	2.7	2	1	1	3	3	3	0	zinc-ribbon	domain
UPF0547	PF10571.4	gi|479325844|ref|YP_007865899.1|	-	0.94	9.2	6.1	4.4	7.0	0.6	2.4	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
DNA_primase_lrg	PF04104.9	gi|479325845|ref|YP_007865900.1|	-	3.9e-14	52.5	5.0	4.3e-07	29.4	0.1	3.0	1	1	2	3	3	3	2	Eukaryotic	and	archaeal	DNA	primase,	large	subunit
CDP-OH_P_transf	PF01066.16	gi|479325846|ref|YP_007865901.1|	-	1.7e-17	63.5	4.5	1.7e-17	63.5	3.1	2.1	2	0	0	2	2	2	1	CDP-alcohol	phosphatidyltransferase
DUF4064	PF13273.1	gi|479325846|ref|YP_007865901.1|	-	0.004	17.2	2.2	0.004	17.2	1.5	2.8	2	1	1	3	3	3	1	Protein	of	unknown	function	(DUF4064)
FA_desaturase	PF00487.19	gi|479325846|ref|YP_007865901.1|	-	0.27	10.6	5.0	0.083	12.3	1.2	1.6	2	0	0	2	2	2	0	Fatty	acid	desaturase
DUF4181	PF13789.1	gi|479325846|ref|YP_007865901.1|	-	8.8	6.3	19.5	1.5	8.8	3.9	3.0	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4181)
Methyltransf_31	PF13847.1	gi|479325848|ref|YP_007865903.1|	-	5.3e-12	45.5	0.1	6.9e-12	45.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|479325848|ref|YP_007865903.1|	-	1.2e-09	38.7	0.0	1.7e-09	38.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
DOT1	PF08123.8	gi|479325848|ref|YP_007865903.1|	-	5.2e-09	35.7	0.1	8.1e-08	31.8	0.1	2.0	1	1	0	1	1	1	1	Histone	methylation	protein	DOT1
PrmA	PF06325.8	gi|479325848|ref|YP_007865903.1|	-	6e-09	35.4	0.3	7.5e-09	35.1	0.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_4	PF02390.12	gi|479325848|ref|YP_007865903.1|	-	3e-08	32.9	0.1	3.9e-08	32.5	0.0	1.2	1	0	0	1	1	1	1	Putative	methyltransferase
Methyltransf_26	PF13659.1	gi|479325848|ref|YP_007865903.1|	-	4.5e-08	33.1	0.0	5.7e-08	32.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.15	gi|479325848|ref|YP_007865903.1|	-	4.6e-07	29.1	0.0	5.6e-07	28.9	0.0	1.1	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_25	PF13649.1	gi|479325848|ref|YP_007865903.1|	-	1.6e-06	28.3	0.0	2.2e-06	27.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|479325848|ref|YP_007865903.1|	-	2.2e-06	27.1	0.1	3e-06	26.6	0.1	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
UPF0020	PF01170.13	gi|479325848|ref|YP_007865903.1|	-	2.4e-05	24.0	0.0	3.2e-05	23.5	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_11	PF08241.7	gi|479325848|ref|YP_007865903.1|	-	3.3e-05	24.2	0.0	5.2e-05	23.6	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
tRNA_U5-meth_tr	PF05958.6	gi|479325848|ref|YP_007865903.1|	-	9.9e-05	21.1	0.0	0.00013	20.8	0.0	1.2	1	0	0	1	1	1	1	tRNA	(Uracil-5-)-methyltransferase
Met_10	PF02475.11	gi|479325848|ref|YP_007865903.1|	-	0.00011	21.9	0.3	0.00013	21.6	0.2	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
N6_Mtase	PF02384.11	gi|479325848|ref|YP_007865903.1|	-	0.00021	20.4	0.0	0.00024	20.2	0.0	1.2	1	0	0	1	1	1	1	N-6	DNA	Methylase
TehB	PF03848.9	gi|479325848|ref|YP_007865903.1|	-	0.00075	18.7	0.1	0.001	18.2	0.0	1.2	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
MetW	PF07021.7	gi|479325848|ref|YP_007865903.1|	-	0.0019	17.5	0.1	0.0023	17.3	0.0	1.3	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
DUF633	PF04816.7	gi|479325848|ref|YP_007865903.1|	-	0.0023	17.3	0.2	0.0049	16.2	0.1	1.6	1	1	0	1	1	1	1	Family	of	unknown	function	(DUF633)
Methyltransf_12	PF08242.7	gi|479325848|ref|YP_007865903.1|	-	0.0026	18.1	0.1	0.0065	16.9	0.1	1.8	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|479325848|ref|YP_007865903.1|	-	0.0034	16.9	0.0	0.0042	16.6	0.0	1.2	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
N6_N4_Mtase	PF01555.13	gi|479325848|ref|YP_007865903.1|	-	0.0053	16.2	0.0	0.0097	15.4	0.0	1.3	1	0	0	1	1	1	1	DNA	methylase
Methyltransf_8	PF05148.10	gi|479325848|ref|YP_007865903.1|	-	0.017	14.7	0.0	0.026	14.1	0.0	1.3	1	0	0	1	1	1	0	Hypothetical	methyltransferase
Methyltransf_23	PF13489.1	gi|479325848|ref|YP_007865903.1|	-	0.02	14.6	0.1	0.029	14.0	0.0	1.4	1	1	0	1	1	1	0	Methyltransferase	domain
PCMT	PF01135.14	gi|479325848|ref|YP_007865903.1|	-	0.03	13.8	0.0	0.038	13.5	0.0	1.3	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
RrnaAD	PF00398.15	gi|479325848|ref|YP_007865903.1|	-	0.085	11.8	0.1	0.12	11.4	0.1	1.3	1	1	0	1	1	1	0	Ribosomal	RNA	adenine	dimethylase
Methyltransf_32	PF13679.1	gi|479325848|ref|YP_007865903.1|	-	0.11	12.1	0.0	0.13	11.9	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
DUF2286	PF10051.4	gi|479325849|ref|YP_007865904.1|	-	5.7e-56	188.0	8.8	6.2e-56	187.9	6.1	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2286)
Thr_synth_N	PF14821.1	gi|479325849|ref|YP_007865904.1|	-	0.059	13.4	0.2	0.16	12.0	0.1	1.7	2	0	0	2	2	2	0	Threonine	synthase	N	terminus
IpaB_EvcA	PF03278.8	gi|479325849|ref|YP_007865904.1|	-	0.078	12.2	1.0	0.26	10.4	0.1	1.9	2	0	0	2	2	2	0	IpaB/EvcA	family
DNA_pol_B	PF00136.16	gi|479325850|ref|YP_007865905.1|	-	1.1e-97	327.7	1.2	1.6e-97	327.2	0.8	1.1	1	0	0	1	1	1	1	DNA	polymerase	family	B
DNA_pol_B_exo1	PF03104.14	gi|479325850|ref|YP_007865905.1|	-	3.4e-32	111.5	1.2	9.3e-32	110.1	0.8	1.8	1	0	0	1	1	1	1	DNA	polymerase	family	B,	exonuclease	domain
RNase_H_2	PF13482.1	gi|479325850|ref|YP_007865905.1|	-	4.6e-06	26.5	0.4	5.6e-05	23.0	0.2	2.9	2	1	0	2	2	2	1	RNase_H	superfamily
DNA_pol_B_exo2	PF10108.4	gi|479325850|ref|YP_007865905.1|	-	5.6e-06	26.0	0.0	1.6e-05	24.5	0.0	1.9	1	1	0	1	1	1	1	Predicted	3'-5'	exonuclease	related	to	the	exonuclease	domain	of	PolB
ACT_6	PF13740.1	gi|479325850|ref|YP_007865905.1|	-	0.019	14.6	0.0	0.067	12.9	0.0	1.9	1	0	0	1	1	1	0	ACT	domain
ACT	PF01842.20	gi|479325850|ref|YP_007865905.1|	-	0.16	11.4	0.3	0.85	9.1	0.0	2.3	2	0	0	2	2	2	0	ACT	domain
DUF367	PF04034.8	gi|479325851|ref|YP_007865906.1|	-	3.8e-46	155.8	0.1	4.5e-46	155.5	0.1	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF367)
RLI	PF04068.10	gi|479325851|ref|YP_007865906.1|	-	1.4e-12	46.9	0.3	2.2e-12	46.3	0.2	1.3	1	0	0	1	1	1	1	Possible	Fer4-like	domain	in	RNase	L	inhibitor,	RLI
MS_channel	PF00924.13	gi|479325852|ref|YP_007865907.1|	-	7.6e-20	71.1	0.5	7.6e-20	71.1	0.3	1.9	2	0	0	2	2	2	1	Mechanosensitive	ion	channel
Polysacc_synt	PF01943.12	gi|479325852|ref|YP_007865907.1|	-	0.061	12.5	20.9	0.11	11.8	14.5	1.4	1	0	0	1	1	1	0	Polysaccharide	biosynthesis	protein
PGK	PF00162.14	gi|479325854|ref|YP_007865909.1|	-	3.5e-111	371.4	0.1	4e-111	371.2	0.1	1.0	1	0	0	1	1	1	1	Phosphoglycerate	kinase
Gp_dh_C	PF02800.15	gi|479325855|ref|YP_007865910.1|	-	5.5e-18	64.8	5.4	8.3e-18	64.3	3.7	1.3	1	0	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
Gp_dh_N	PF00044.19	gi|479325855|ref|YP_007865910.1|	-	1e-17	64.4	2.3	3.3e-17	62.8	0.1	2.5	2	1	1	3	3	3	1	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
DapB_N	PF01113.15	gi|479325855|ref|YP_007865910.1|	-	2.4e-11	43.6	0.3	7.8e-11	41.9	0.0	2.0	2	0	0	2	2	2	1	Dihydrodipicolinate	reductase,	N-terminus
NAD_binding_3	PF03447.11	gi|479325855|ref|YP_007865910.1|	-	0.0001	22.7	0.2	0.00061	20.1	0.0	2.4	3	0	0	3	3	3	1	Homoserine	dehydrogenase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.14	gi|479325855|ref|YP_007865910.1|	-	0.0035	16.5	0.8	0.2	10.7	0.1	3.0	2	1	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Semialdhyde_dh	PF01118.19	gi|479325855|ref|YP_007865910.1|	-	0.017	15.3	0.2	0.094	13.0	0.0	2.3	2	1	0	2	2	2	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
NAD_binding_2	PF03446.10	gi|479325855|ref|YP_007865910.1|	-	0.023	14.5	1.0	0.89	9.3	0.0	2.8	2	1	0	2	2	2	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Usp	PF00582.21	gi|479325856|ref|YP_007865911.1|	-	8.5e-21	74.6	0.0	1.3e-20	74.0	0.0	1.3	1	1	0	1	1	1	1	Universal	stress	protein	family
SHMT	PF00464.14	gi|479325857|ref|YP_007865912.1|	-	9.5e-66	221.7	0.1	1.3e-65	221.3	0.1	1.1	1	0	0	1	1	1	1	Serine	hydroxymethyltransferase
Aminotran_1_2	PF00155.16	gi|479325857|ref|YP_007865912.1|	-	5.8e-09	35.3	0.0	2.2e-08	33.4	0.0	1.9	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Beta_elim_lyase	PF01212.16	gi|479325857|ref|YP_007865912.1|	-	9.9e-09	34.7	0.0	1.3e-08	34.3	0.0	1.2	1	0	0	1	1	1	1	Beta-eliminating	lyase
Aminotran_5	PF00266.14	gi|479325857|ref|YP_007865912.1|	-	0.00017	20.4	0.1	0.00066	18.5	0.1	1.9	1	1	0	1	1	1	1	Aminotransferase	class-V
SelA	PF03841.8	gi|479325857|ref|YP_007865912.1|	-	0.061	12.0	0.0	0.11	11.2	0.0	1.6	1	1	0	1	1	1	0	L-seryl-tRNA	selenium	transferase
Adenine_glyco	PF03352.8	gi|479325857|ref|YP_007865912.1|	-	0.15	11.5	2.6	1.1	8.7	0.0	3.2	3	1	1	4	4	4	0	Methyladenine	glycosylase
DUF919	PF06034.6	gi|479325857|ref|YP_007865912.1|	-	2.5	7.7	6.7	1.4	8.6	0.7	2.9	3	0	0	3	3	3	0	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF919)
HMG-CoA_red	PF00368.13	gi|479325858|ref|YP_007865913.1|	-	8.8e-146	485.3	0.3	1.1e-145	485.0	0.2	1.0	1	0	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	reductase
DUF35	PF01796.12	gi|479325859|ref|YP_007865914.1|	-	1.7e-13	50.5	0.0	2.2e-13	50.2	0.0	1.1	1	0	0	1	1	1	1	DUF35	OB-fold	domain
DUF35_N	PF12172.3	gi|479325859|ref|YP_007865914.1|	-	5.2e-06	26.2	0.0	8.4e-06	25.5	0.0	1.3	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DZR	PF12773.2	gi|479325859|ref|YP_007865914.1|	-	0.002	17.9	1.5	0.003	17.3	1.0	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
NOB1_Zn_bind	PF08772.6	gi|479325859|ref|YP_007865914.1|	-	0.014	15.2	1.8	0.045	13.5	1.3	1.8	2	1	0	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
zinc_ribbon_2	PF13240.1	gi|479325859|ref|YP_007865914.1|	-	0.015	14.8	3.0	0.49	9.9	0.3	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-NADH-PPase	PF09297.6	gi|479325859|ref|YP_007865914.1|	-	0.042	13.3	0.3	5.2	6.6	0.1	2.4	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
Nudix_N_2	PF14803.1	gi|479325859|ref|YP_007865914.1|	-	0.055	13.1	2.6	2	8.1	0.1	2.4	2	0	0	2	2	2	0	Nudix	N-terminal
zf-ribbon_3	PF13248.1	gi|479325859|ref|YP_007865914.1|	-	0.082	12.1	5.1	0.19	11.0	3.6	1.6	1	1	0	1	1	1	0	zinc-ribbon	domain
Auto_anti-p27	PF06677.7	gi|479325859|ref|YP_007865914.1|	-	0.7	9.6	2.8	2.9	7.7	2.0	1.9	1	1	1	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
ACP_syn_III	PF08545.5	gi|479325860|ref|YP_007865915.1|	-	5.9e-05	22.6	0.1	0.0036	16.9	0.0	2.7	2	0	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Thiolase_N	PF00108.18	gi|479325860|ref|YP_007865915.1|	-	0.0009	18.3	0.0	0.0017	17.4	0.0	1.4	1	0	0	1	1	1	1	Thiolase,	N-terminal	domain
ACP_syn_III_C	PF08541.5	gi|479325861|ref|YP_007865916.1|	-	9.3e-12	44.8	0.0	8.8e-11	41.6	0.0	2.4	2	0	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III	C	terminal
HMG_CoA_synt_C	PF08540.5	gi|479325861|ref|YP_007865916.1|	-	1.4e-05	24.7	0.1	0.0042	16.6	0.0	2.2	1	1	1	2	2	2	2	Hydroxymethylglutaryl-coenzyme	A	synthase	C	terminal
ACP_syn_III	PF08545.5	gi|479325861|ref|YP_007865916.1|	-	1.7e-05	24.3	0.8	3.9e-05	23.2	0.6	1.6	1	0	0	1	1	1	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Chal_sti_synt_N	PF00195.14	gi|479325861|ref|YP_007865916.1|	-	0.0056	15.9	0.0	0.075	12.2	0.0	2.1	2	0	0	2	2	2	1	Chalcone	and	stilbene	synthases,	N-terminal	domain
Thiolase_C	PF02803.13	gi|479325861|ref|YP_007865916.1|	-	0.037	13.4	0.0	0.075	12.4	0.0	1.5	1	0	0	1	1	1	0	Thiolase,	C-terminal	domain
AdoMet_dc	PF02675.10	gi|479325862|ref|YP_007865917.1|	-	6.2e-34	116.0	0.0	7.2e-34	115.8	0.0	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	decarboxylase
YbaB_DNA_bd	PF02575.11	gi|479325862|ref|YP_007865917.1|	-	0.0055	16.5	0.0	0.009	15.8	0.0	1.3	1	0	0	1	1	1	1	YbaB/EbfC	DNA-binding	family
MMS22L_N	PF14910.1	gi|479325864|ref|YP_007865919.1|	-	0.018	13.3	0.0	0.024	12.9	0.0	1.1	1	0	0	1	1	1	0	S-phase	genomic	integrity	recombination	mediator,	N-terminal
Phage_int_SAM_4	PF13495.1	gi|479325864|ref|YP_007865919.1|	-	0.034	14.4	0.1	0.099	12.9	0.0	1.8	2	0	0	2	2	2	0	Phage	integrase,	N-terminal	SAM-like	domain
MogR_DNAbind	PF12181.3	gi|479325864|ref|YP_007865919.1|	-	0.044	13.5	3.6	0.13	11.9	0.1	2.1	2	0	0	2	2	2	0	DNA	binding	domain	of	the	motility	gene	repressor	(MogR)
DUF3890	PF13029.1	gi|479325864|ref|YP_007865919.1|	-	0.062	13.3	0.1	0.18	11.8	0.1	1.8	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3890)
Frankia_peptide	PF14407.1	gi|479325864|ref|YP_007865919.1|	-	0.087	12.5	0.2	0.2	11.4	0.0	1.7	2	0	0	2	2	2	0	Ribosomally	synthesized	peptide	prototyped	by	Frankia	Franean1_4349.
MFS_1	PF07690.11	gi|479325865|ref|YP_007865920.1|	-	1.5e-33	116.0	57.9	2.3e-26	92.3	22.2	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|479325865|ref|YP_007865920.1|	-	7.7e-05	20.9	8.3	7.7e-05	20.9	5.8	1.9	1	1	1	2	2	2	1	Transmembrane	secretion	effector
OATP	PF03137.15	gi|479325865|ref|YP_007865920.1|	-	0.59	8.1	17.2	0.2	9.6	0.5	3.2	2	2	1	3	3	3	0	Organic	Anion	Transporter	Polypeptide	(OATP)	family
Antitoxin-MazE	PF04014.13	gi|479325867|ref|YP_007865922.1|	-	1.9e-08	33.8	4.4	2e-08	33.7	2.6	1.4	1	1	0	1	1	1	1	Antidote-toxin	recognition	MazE
PAZ_siRNAbind	PF12212.3	gi|479325867|ref|YP_007865922.1|	-	0.043	13.4	1.6	0.21	11.2	0.2	2.2	2	0	0	2	2	2	0	Piwi/Argonaute/Zwille	siRNA-binding	domain
PIN	PF01850.16	gi|479325868|ref|YP_007865923.1|	-	2.4e-18	66.6	0.9	2.9e-18	66.3	0.6	1.2	1	0	0	1	1	1	1	PIN	domain
Hormone_2	PF00123.15	gi|479325868|ref|YP_007865923.1|	-	0.087	12.6	0.0	0.26	11.1	0.0	1.8	1	0	0	1	1	1	0	Peptide	hormone
DUF2540	PF10802.3	gi|479325868|ref|YP_007865923.1|	-	0.11	12.1	2.5	0.2	11.3	0.1	2.4	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2540)
PNP_UDP_1	PF01048.15	gi|479325869|ref|YP_007865924.1|	-	1.1e-16	60.5	0.0	1.3e-16	60.3	0.0	1.1	1	0	0	1	1	1	1	Phosphorylase	superfamily
SPASM	PF13186.1	gi|479325870|ref|YP_007865925.1|	-	2.5e-09	37.3	0.0	7.6e-09	35.7	0.0	1.8	1	0	0	1	1	1	1	Iron-sulfur	cluster-binding	domain
Radical_SAM	PF04055.16	gi|479325870|ref|YP_007865925.1|	-	6.2e-09	36.2	0.3	9.6e-09	35.6	0.2	1.3	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|479325870|ref|YP_007865925.1|	-	0.00039	20.5	0.1	0.0029	17.7	0.0	2.3	1	1	1	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|479325870|ref|YP_007865925.1|	-	0.00043	20.2	0.0	0.0026	17.7	0.0	2.2	2	1	1	3	3	3	1	4Fe-4S	single	cluster	domain
MFS_1	PF07690.11	gi|479325871|ref|YP_007865926.1|	-	1.4e-26	93.1	36.3	1.4e-26	93.1	25.2	1.6	1	1	0	1	1	1	1	Major	Facilitator	Superfamily
MFS_2	PF13347.1	gi|479325871|ref|YP_007865926.1|	-	0.095	11.0	44.5	0.9	7.8	26.0	3.5	1	1	1	2	2	2	0	MFS/sugar	transport	protein
Sulfolobus_pRN	PF05584.6	gi|479325872|ref|YP_007865927.1|	-	1.1e-14	54.1	0.1	1.4e-14	53.8	0.1	1.1	1	0	0	1	1	1	1	Sulfolobus	plasmid	regulatory	protein
HTH_24	PF13412.1	gi|479325872|ref|YP_007865927.1|	-	0.031	13.6	0.1	0.058	12.7	0.0	1.5	1	1	1	2	2	2	0	Winged	helix-turn-helix	DNA-binding
DUF4065	PF13274.1	gi|479325880|ref|YP_007865935.1|	-	0.00086	19.9	4.0	0.002	18.8	2.8	1.6	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF4065)
SNF2_N	PF00176.18	gi|479325881|ref|YP_007865936.1|	-	0.084	11.6	0.2	0.2	10.4	0.1	1.7	2	0	0	2	2	2	0	SNF2	family	N-terminal	domain
PLDc_2	PF13091.1	gi|479325882|ref|YP_007865937.1|	-	2.6e-15	56.2	0.7	6.2e-15	55.0	0.1	1.9	2	0	0	2	2	2	1	PLD-like	domain
RE_NgoFVII	PF09565.5	gi|479325882|ref|YP_007865937.1|	-	1.7e-08	33.7	1.1	4e-08	32.5	0.7	1.8	1	1	0	1	1	1	1	NgoFVII	restriction	endonuclease
Transposase_1	PF01359.13	gi|479325882|ref|YP_007865937.1|	-	0.1	12.3	0.8	0.25	11.1	0.3	1.8	2	0	0	2	2	2	0	Transposase	(partial	DDE	domain)
Orbi_NS1	PF01718.11	gi|479325884|ref|YP_007865939.1|	-	0.039	11.9	0.1	0.046	11.7	0.0	1.0	1	0	0	1	1	1	0	Orbivirus	non-structural	protein	NS1,	or	hydrophobic	tubular	protein
Apc3	PF12895.2	gi|479325885|ref|YP_007865940.1|	-	4.7e-08	33.0	3.4	4.7e-08	33.0	2.4	4.8	2	2	2	4	4	4	1	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_12	PF13424.1	gi|479325885|ref|YP_007865940.1|	-	8.8e-08	31.9	17.4	0.039	13.8	0.1	5.7	3	2	3	6	6	6	5	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|479325885|ref|YP_007865940.1|	-	7.6e-07	29.6	1.8	1.1	10.0	0.0	4.1	4	1	0	4	4	4	2	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|479325885|ref|YP_007865940.1|	-	7.7e-06	26.0	0.4	28	5.7	0.0	6.5	4	3	3	7	7	7	0	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|479325885|ref|YP_007865940.1|	-	1.9e-05	24.1	0.9	1.9e-05	24.1	0.6	4.9	4	2	0	5	5	5	1	TPR	repeat
TPR_6	PF13174.1	gi|479325885|ref|YP_007865940.1|	-	4.1e-05	23.7	9.9	3	8.5	0.0	6.6	7	1	1	8	8	7	1	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|479325885|ref|YP_007865940.1|	-	0.0005	20.3	18.2	0.071	13.4	0.4	5.9	3	2	3	6	6	6	2	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|479325885|ref|YP_007865940.1|	-	0.0016	18.0	9.6	3.6	7.6	0.2	6.2	5	2	0	5	5	5	1	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|479325885|ref|YP_007865940.1|	-	0.0017	18.1	14.0	1.2	9.2	0.0	6.5	7	1	0	7	7	5	2	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|479325885|ref|YP_007865940.1|	-	0.01	15.5	0.3	0.01	15.5	0.2	8.0	7	2	1	8	8	8	0	Tetratricopeptide	repeat
EF-hand_2	PF09068.6	gi|479325885|ref|YP_007865940.1|	-	0.056	13.5	1.0	0.17	11.9	0.1	2.1	2	1	0	2	2	2	0	EF	hand
TPR_20	PF14561.1	gi|479325885|ref|YP_007865940.1|	-	0.062	13.4	0.1	0.062	13.4	0.1	2.4	3	0	0	3	3	2	0	Tetratricopeptide	repeat
TPR_15	PF13429.1	gi|479325885|ref|YP_007865940.1|	-	0.064	12.3	9.0	0.12	11.3	0.4	3.7	1	1	3	4	4	4	0	Tetratricopeptide	repeat
DUF1136	PF06582.7	gi|479325885|ref|YP_007865940.1|	-	0.2	11.3	5.3	1.3	8.7	0.1	2.7	2	0	0	2	2	2	0	Repeat	of	unknown	function	(DUF1136)
TPR_10	PF13374.1	gi|479325885|ref|YP_007865940.1|	-	0.59	10.1	8.7	43	4.2	0.1	5.7	6	0	0	6	6	6	0	Tetratricopeptide	repeat
T2SF	PF00482.18	gi|479325885|ref|YP_007865940.1|	-	1.5	8.7	4.8	0.69	9.8	0.0	2.8	4	0	0	4	4	4	0	Type	II	secretion	system	(T2SS),	protein	F
TPR_1	PF00515.23	gi|479325885|ref|YP_007865940.1|	-	2.4	7.8	18.8	3.8	7.2	0.0	6.1	8	1	1	9	9	8	0	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|479325885|ref|YP_007865940.1|	-	7	7.1	12.2	12	6.4	0.0	5.1	6	0	0	6	6	5	0	Tetratricopeptide	repeat
Antitoxin-MazE	PF04014.13	gi|479325886|ref|YP_007865941.1|	-	1.1e-09	37.7	0.2	1.3e-09	37.5	0.1	1.1	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
eIF-1a	PF01176.14	gi|479325886|ref|YP_007865941.1|	-	0.00055	19.2	0.3	0.00068	19.0	0.2	1.3	1	0	0	1	1	1	1	Translation	initiation	factor	1A	/	IF-1
IU_nuc_hydro	PF01156.14	gi|479325887|ref|YP_007865942.1|	-	8.5e-78	261.7	0.1	1e-77	261.4	0.1	1.0	1	0	0	1	1	1	1	Inosine-uridine	preferring	nucleoside	hydrolase
tRNA-synt_1	PF00133.17	gi|479325888|ref|YP_007865943.1|	-	1.8e-61	207.9	0.9	7.4e-50	169.5	0.6	2.4	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1g	PF09334.6	gi|479325888|ref|YP_007865943.1|	-	4.9e-28	97.8	1.4	2.6e-12	46.1	0.0	3.8	3	1	1	4	4	4	3	tRNA	synthetases	class	I	(M)
Anticodon_1	PF08264.8	gi|479325888|ref|YP_007865943.1|	-	2.8e-20	72.6	2.8	8.2e-20	71.1	2.0	1.8	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1e	PF01406.14	gi|479325888|ref|YP_007865943.1|	-	1.4e-15	57.1	4.3	4.4e-09	35.8	0.0	3.3	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1_2	PF13603.1	gi|479325888|ref|YP_007865943.1|	-	2.2e-09	36.8	3.6	1.2e-08	34.4	0.4	2.9	3	0	0	3	3	3	1	Leucyl-tRNA	synthetase,	Domain	2
LysE	PF01810.13	gi|479325889|ref|YP_007865944.1|	-	0.0089	15.3	0.4	0.0089	15.3	0.3	2.2	2	1	0	2	2	2	1	LysE	type	translocator
Gram_pos_anchor	PF00746.16	gi|479325889|ref|YP_007865944.1|	-	2.1	8.2	0.0	2.1	8.2	0.0	3.8	4	0	0	4	4	4	0	Gram	positive	anchor
FeoB_C	PF07664.7	gi|479325889|ref|YP_007865944.1|	-	9.9	5.6	7.2	1.1	8.7	0.2	3.0	3	0	0	3	3	3	0	Ferrous	iron	transport	protein	B	C	terminus
RseC_MucC	PF04246.7	gi|479325890|ref|YP_007865945.1|	-	0.059	12.9	1.8	0.066	12.7	1.2	1.1	1	0	0	1	1	1	0	Positive	regulator	of	sigma(E),	RseC/MucC
Baculo_11_kDa	PF06143.6	gi|479325890|ref|YP_007865945.1|	-	0.066	12.5	2.9	0.06	12.7	1.7	1.3	1	1	0	1	1	1	0	Baculovirus	11	kDa	family
DUF3112	PF11309.3	gi|479325890|ref|YP_007865945.1|	-	0.072	12.8	1.3	0.084	12.6	0.9	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3112)
VMA21	PF09446.5	gi|479325890|ref|YP_007865945.1|	-	0.098	12.5	2.3	0.12	12.3	1.6	1.2	1	0	0	1	1	1	0	VMA21-like	domain
DUF4131	PF13567.1	gi|479325890|ref|YP_007865945.1|	-	3.9	6.8	6.1	5	6.5	4.2	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
TerY-C	PF15616.1	gi|479325893|ref|YP_007865948.1|	-	0.048	13.5	0.1	0.098	12.5	0.1	1.6	1	1	0	1	1	1	0	TerY-C	metal	binding	domain
Thg1C	PF14413.1	gi|479325893|ref|YP_007865948.1|	-	0.21	11.2	2.4	0.38	10.4	1.7	1.4	1	0	0	1	1	1	0	Thg1	C	terminal	domain
WHG	PF13305.1	gi|479325894|ref|YP_007865949.1|	-	0.029	14.9	0.0	0.035	14.6	0.0	1.1	1	0	0	1	1	1	0	WHG	domain
Phage_XkdX	PF09693.5	gi|479325894|ref|YP_007865949.1|	-	0.1	12.1	0.0	0.2	11.2	0.0	1.4	1	0	0	1	1	1	0	Phage	uncharacterised	protein	(Phage_XkdX)
P5CR_dimer	PF14748.1	gi|479325898|ref|YP_007865953.1|	-	1e-28	99.4	0.0	1.6e-28	98.8	0.0	1.3	1	0	0	1	1	1	1	Pyrroline-5-carboxylate	reductase	dimerisation
F420_oxidored	PF03807.12	gi|479325898|ref|YP_007865953.1|	-	7.7e-20	71.1	0.5	1.5e-19	70.2	0.1	1.7	2	0	0	2	2	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_Gly3P_dh_N	PF01210.18	gi|479325898|ref|YP_007865953.1|	-	4.9e-09	36.1	1.0	3e-08	33.5	0.7	2.1	1	1	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
2-Hacid_dh_C	PF02826.14	gi|479325898|ref|YP_007865953.1|	-	5.7e-06	25.5	0.0	9.5e-06	24.8	0.0	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
PDH	PF02153.12	gi|479325898|ref|YP_007865953.1|	-	3.2e-05	22.9	1.2	0.00043	19.2	0.2	2.2	2	0	0	2	2	2	1	Prephenate	dehydrogenase
NAD_binding_2	PF03446.10	gi|479325898|ref|YP_007865953.1|	-	0.00029	20.7	0.1	0.0021	17.8	0.0	2.1	1	1	1	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
DapB_N	PF01113.15	gi|479325898|ref|YP_007865953.1|	-	0.00031	20.6	0.0	0.00065	19.6	0.0	1.6	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
ApbA	PF02558.11	gi|479325898|ref|YP_007865953.1|	-	0.0012	18.3	0.3	0.0025	17.2	0.1	1.7	2	0	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
GFO_IDH_MocA	PF01408.17	gi|479325898|ref|YP_007865953.1|	-	0.0048	17.3	0.0	0.0087	16.5	0.0	1.4	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
Rossmann-like	PF10727.4	gi|479325898|ref|YP_007865953.1|	-	0.0076	15.9	0.1	0.013	15.2	0.1	1.4	1	0	0	1	1	1	1	Rossmann-like	domain
OCD_Mu_crystall	PF02423.10	gi|479325898|ref|YP_007865953.1|	-	0.021	13.6	0.1	0.029	13.1	0.1	1.4	1	0	0	1	1	1	0	Ornithine	cyclodeaminase/mu-crystallin	family
Shikimate_DH	PF01488.15	gi|479325898|ref|YP_007865953.1|	-	0.029	14.4	0.3	0.077	13.0	0.1	1.8	1	1	1	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
DUF72	PF01904.13	gi|479325899|ref|YP_007865954.1|	-	1.6e-44	152.4	1.8	1.8e-44	152.2	1.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF72
Methyltransf_5	PF01795.14	gi|479325899|ref|YP_007865954.1|	-	0.11	11.7	0.0	0.15	11.3	0.0	1.2	1	0	0	1	1	1	0	MraW	methylase	family
MMtag	PF10159.4	gi|479325899|ref|YP_007865954.1|	-	0.25	11.3	8.7	0.66	10.0	0.5	3.4	4	0	0	4	4	4	0	Kinase	phosphorylation	protein
PALP	PF00291.20	gi|479325900|ref|YP_007865955.1|	-	1.1e-62	211.9	0.1	1.3e-62	211.7	0.1	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
ORC4_C	PF14629.1	gi|479325900|ref|YP_007865955.1|	-	0.047	13.0	0.0	0.1	11.9	0.0	1.5	1	1	1	2	2	2	0	Origin	recognition	complex	(ORC)	subunit	4	C-terminus
DFP	PF04127.10	gi|479325900|ref|YP_007865955.1|	-	0.08	12.5	0.2	0.14	11.7	0.1	1.4	1	0	0	1	1	1	0	DNA	/	pantothenate	metabolism	flavoprotein
Zn-ribbon_8	PF09723.5	gi|479325900|ref|YP_007865955.1|	-	0.14	12.1	2.3	0.2	11.6	0.1	2.2	1	1	1	2	2	2	0	Zinc	ribbon	domain
ABC_tran	PF00005.22	gi|479325901|ref|YP_007865956.1|	-	6.1e-28	97.8	0.0	9e-28	97.2	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|479325901|ref|YP_007865956.1|	-	8.4e-08	32.5	0.5	3.7e-05	23.8	0.0	2.1	1	1	0	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|479325901|ref|YP_007865956.1|	-	2.9e-06	26.6	0.1	3.3e-06	26.4	0.0	1.2	1	0	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_21	PF13304.1	gi|479325902|ref|YP_007865957.1|	-	6.9e-15	55.7	3.4	1e-06	28.9	0.1	2.2	1	1	1	2	2	2	2	AAA	domain
ABC_tran	PF00005.22	gi|479325902|ref|YP_007865957.1|	-	7.7e-14	52.1	0.0	1.5e-13	51.2	0.0	1.5	1	1	0	1	1	1	1	ABC	transporter
SMC_N	PF02463.14	gi|479325902|ref|YP_007865957.1|	-	3.9e-10	39.3	1.9	0.00021	20.6	0.2	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|479325902|ref|YP_007865957.1|	-	2.6e-08	34.4	2.5	4.6e-08	33.6	1.7	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|479325902|ref|YP_007865957.1|	-	3.5e-07	29.6	3.3	0.00022	20.3	0.2	2.2	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA_13	PF13166.1	gi|479325902|ref|YP_007865957.1|	-	5.9e-07	28.3	1.4	0.0013	17.3	0.1	2.2	2	0	0	2	2	2	2	AAA	domain
Zeta_toxin	PF06414.7	gi|479325902|ref|YP_007865957.1|	-	0.00019	20.6	0.3	0.11	11.5	0.1	2.1	2	0	0	2	2	2	2	Zeta	toxin
AAA_18	PF13238.1	gi|479325902|ref|YP_007865957.1|	-	0.00032	20.9	0.5	0.00072	19.8	0.4	1.6	1	1	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|479325902|ref|YP_007865957.1|	-	0.00036	20.2	2.2	0.00083	19.1	1.4	1.8	1	1	0	1	1	1	1	Archaeal	ATPase
AAA_29	PF13555.1	gi|479325902|ref|YP_007865957.1|	-	0.00054	19.4	0.2	0.0011	18.3	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
T2SE	PF00437.15	gi|479325902|ref|YP_007865957.1|	-	0.0016	17.4	0.2	0.0031	16.4	0.1	1.4	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_33	PF13671.1	gi|479325902|ref|YP_007865957.1|	-	0.0021	17.9	0.0	0.0097	15.7	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
NACHT	PF05729.7	gi|479325902|ref|YP_007865957.1|	-	0.0048	16.5	0.0	0.0078	15.8	0.0	1.3	1	0	0	1	1	1	1	NACHT	domain
MobB	PF03205.9	gi|479325902|ref|YP_007865957.1|	-	0.0068	16.1	0.1	0.013	15.1	0.0	1.5	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ABC_ATPase	PF09818.4	gi|479325902|ref|YP_007865957.1|	-	0.0071	14.9	0.1	0.018	13.6	0.1	1.6	2	0	0	2	2	2	1	Predicted	ATPase	of	the	ABC	class
cobW	PF02492.14	gi|479325902|ref|YP_007865957.1|	-	0.0073	15.7	0.2	0.015	14.7	0.0	1.6	2	0	0	2	2	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
NTPase_1	PF03266.10	gi|479325902|ref|YP_007865957.1|	-	0.0076	15.9	0.1	0.016	14.9	0.1	1.6	1	1	0	1	1	1	1	NTPase
AAA_16	PF13191.1	gi|479325902|ref|YP_007865957.1|	-	0.0078	16.2	0.0	0.0096	15.9	0.0	1.3	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|479325902|ref|YP_007865957.1|	-	0.012	15.7	0.1	0.016	15.3	0.1	1.6	1	1	0	1	1	1	0	AAA	domain
AAA_19	PF13245.1	gi|479325902|ref|YP_007865957.1|	-	0.012	15.3	0.0	0.022	14.4	0.0	1.4	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA	PF00004.24	gi|479325902|ref|YP_007865957.1|	-	0.013	15.6	0.0	0.026	14.7	0.0	1.6	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
SbcCD_C	PF13558.1	gi|479325902|ref|YP_007865957.1|	-	0.017	15.0	0.1	0.53	10.2	0.1	2.2	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
Adeno_IVa2	PF02456.10	gi|479325902|ref|YP_007865957.1|	-	0.019	13.6	0.2	0.042	12.4	0.1	1.5	2	0	0	2	2	2	0	Adenovirus	IVa2	protein
AAA_10	PF12846.2	gi|479325902|ref|YP_007865957.1|	-	0.021	14.3	0.0	0.027	13.9	0.0	1.3	1	0	0	1	1	1	0	AAA-like	domain
AAA_14	PF13173.1	gi|479325902|ref|YP_007865957.1|	-	0.022	14.6	0.3	0.042	13.7	0.2	1.8	1	1	0	1	1	1	0	AAA	domain
AAA_30	PF13604.1	gi|479325902|ref|YP_007865957.1|	-	0.031	13.8	0.0	0.041	13.4	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_17	PF13207.1	gi|479325902|ref|YP_007865957.1|	-	0.045	14.5	0.4	0.1	13.3	0.3	1.9	1	1	0	1	1	1	0	AAA	domain
DUF258	PF03193.11	gi|479325902|ref|YP_007865957.1|	-	0.05	12.7	0.0	0.07	12.3	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
Miro	PF08477.8	gi|479325902|ref|YP_007865957.1|	-	0.051	14.0	0.0	0.086	13.3	0.0	1.5	1	0	0	1	1	1	0	Miro-like	protein
FtsK_SpoIIIE	PF01580.13	gi|479325902|ref|YP_007865957.1|	-	0.079	12.4	0.3	0.13	11.6	0.2	1.3	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
AAA_28	PF13521.1	gi|479325902|ref|YP_007865957.1|	-	0.091	12.7	0.0	0.16	11.9	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
UPF0079	PF02367.12	gi|479325902|ref|YP_007865957.1|	-	0.13	11.9	0.0	0.25	10.9	0.0	1.6	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
MutS_V	PF00488.16	gi|479325902|ref|YP_007865957.1|	-	0.14	11.5	0.0	0.26	10.6	0.0	1.5	1	0	0	1	1	1	0	MutS	domain	V
DUF3584	PF12128.3	gi|479325902|ref|YP_007865957.1|	-	0.18	9.0	0.2	0.27	8.5	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
FecCD	PF01032.13	gi|479325903|ref|YP_007865958.1|	-	1e-67	228.2	41.7	1.3e-67	227.8	28.9	1.0	1	0	0	1	1	1	1	FecCD	transport	family
ABC-3	PF00950.12	gi|479325903|ref|YP_007865958.1|	-	0.00067	19.0	26.6	0.00067	19.0	18.4	1.8	2	1	0	2	2	2	1	ABC	3	transport	family
Peripla_BP_2	PF01497.13	gi|479325904|ref|YP_007865959.1|	-	2e-18	66.4	0.0	2.9e-18	65.8	0.0	1.2	1	0	0	1	1	1	1	Periplasmic	binding	protein
DUF3352	PF11832.3	gi|479325904|ref|YP_007865959.1|	-	0.067	11.4	0.1	0.093	11.0	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3352)
YWFCY	PF14293.1	gi|479325904|ref|YP_007865959.1|	-	0.3	10.9	1.4	6.1	6.7	0.3	2.4	2	0	0	2	2	2	0	YWFCY	protein
TatC	PF00902.13	gi|479325905|ref|YP_007865960.1|	-	4.8e-41	140.5	19.2	4.8e-41	140.5	13.3	1.3	1	1	0	1	1	1	1	Sec-independent	protein	translocase	protein	(TatC)
Herpes_HEPA	PF03324.9	gi|479325905|ref|YP_007865960.1|	-	0.013	15.5	0.6	0.033	14.1	0.4	1.7	1	0	0	1	1	1	0	Herpesvirus	DNA	helicase/primase	complex	associated	protein
LPAM_1	PF08139.7	gi|479325905|ref|YP_007865960.1|	-	2.4	8.5	6.6	4.1	7.7	1.6	2.8	2	0	0	2	2	2	0	Prokaryotic	membrane	lipoprotein	lipid	attachment	site
PHO4	PF01384.15	gi|479325905|ref|YP_007865960.1|	-	2.6	6.6	13.2	1.1	7.8	6.8	1.7	1	1	1	2	2	2	0	Phosphate	transporter	family
SPX	PF03105.14	gi|479325906|ref|YP_007865961.1|	-	0.00066	19.5	0.8	0.00071	19.4	0.6	1.0	1	0	0	1	1	1	1	SPX	domain
Phasin	PF05597.6	gi|479325906|ref|YP_007865961.1|	-	0.0014	18.3	0.5	0.0017	18.1	0.4	1.1	1	0	0	1	1	1	1	Poly(hydroxyalcanoate)	granule	associated	protein	(phasin)
EzrA	PF06160.7	gi|479325906|ref|YP_007865961.1|	-	0.0041	15.3	0.3	0.0048	15.1	0.2	1.1	1	0	0	1	1	1	1	Septation	ring	formation	regulator,	EzrA
DUF3375	PF11855.3	gi|479325906|ref|YP_007865961.1|	-	0.0089	14.8	0.5	0.0089	14.8	0.3	1.4	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF3375)
bZIP_2	PF07716.10	gi|479325906|ref|YP_007865961.1|	-	0.0092	15.7	3.0	0.0092	15.7	2.1	2.1	2	0	0	2	2	2	1	Basic	region	leucine	zipper
Cob_adeno_trans	PF01923.13	gi|479325906|ref|YP_007865961.1|	-	0.015	15.0	0.1	0.02	14.6	0.1	1.2	1	0	0	1	1	1	0	Cobalamin	adenosyltransferase
IncA	PF04156.9	gi|479325906|ref|YP_007865961.1|	-	0.02	14.4	1.7	0.031	13.8	1.2	1.3	1	1	0	1	1	1	0	IncA	protein
FlxA	PF14282.1	gi|479325906|ref|YP_007865961.1|	-	0.024	14.5	1.5	0.032	14.1	0.4	1.6	1	1	0	1	1	1	0	FlxA-like	protein
DUF4140	PF13600.1	gi|479325906|ref|YP_007865961.1|	-	0.029	14.8	1.3	0.038	14.4	0.6	1.4	1	1	0	1	1	1	0	N-terminal	domain	of	unknown	function	(DUF4140)
DUF16	PF01519.11	gi|479325906|ref|YP_007865961.1|	-	0.029	14.5	2.4	0.06	13.5	1.8	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	DUF16
DMPK_coil	PF08826.5	gi|479325906|ref|YP_007865961.1|	-	0.031	14.1	6.8	0.12	12.3	4.7	1.9	1	1	0	1	1	1	0	DMPK	coiled	coil	domain	like
DUF342	PF03961.8	gi|479325906|ref|YP_007865961.1|	-	0.033	12.6	0.6	0.037	12.4	0.4	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
NYD-SP28	PF14772.1	gi|479325906|ref|YP_007865961.1|	-	0.049	13.7	0.8	0.066	13.3	0.6	1.2	1	0	0	1	1	1	0	Sperm	tail
DivIC	PF04977.10	gi|479325906|ref|YP_007865961.1|	-	0.053	13.0	0.8	0.053	13.0	0.5	2.0	3	0	0	3	3	2	0	Septum	formation	initiator
TMF_DNA_bd	PF12329.3	gi|479325906|ref|YP_007865961.1|	-	0.054	13.3	2.8	0.054	13.3	1.9	1.8	2	0	0	2	2	2	0	TATA	element	modulatory	factor	1	DNA	binding
DUF1192	PF06698.6	gi|479325906|ref|YP_007865961.1|	-	0.066	13.0	1.7	0.066	13.0	1.2	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1192)
Erp_C	PF06780.6	gi|479325906|ref|YP_007865961.1|	-	0.089	12.6	0.8	0.11	12.3	0.5	1.0	1	0	0	1	1	1	0	Erp	protein	C-terminus
FliD_N	PF02465.13	gi|479325906|ref|YP_007865961.1|	-	0.11	12.8	0.1	0.31	11.4	0.0	1.7	1	1	1	2	2	2	0	Flagellar	hook-associated	protein	2	N-terminus
DUF677	PF05055.7	gi|479325906|ref|YP_007865961.1|	-	0.12	11.0	1.8	0.16	10.6	1.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF677)
MttA_Hcf106	PF02416.11	gi|479325906|ref|YP_007865961.1|	-	0.12	11.4	2.3	0.23	10.6	1.6	1.7	1	1	0	1	1	1	0	mttA/Hcf106	family
DUF2802	PF10975.3	gi|479325906|ref|YP_007865961.1|	-	0.15	11.8	1.7	0.39	10.5	0.4	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2802)
Med9	PF07544.8	gi|479325906|ref|YP_007865961.1|	-	0.16	11.7	3.7	0.51	10.1	1.6	1.9	2	0	0	2	2	2	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
Prefoldin_2	PF01920.15	gi|479325906|ref|YP_007865961.1|	-	0.2	11.4	6.5	0.27	11.0	1.8	2.0	1	1	0	2	2	2	0	Prefoldin	subunit
Mnd1	PF03962.10	gi|479325906|ref|YP_007865961.1|	-	0.21	11.2	2.9	0.27	10.8	2.0	1.2	1	1	0	1	1	1	0	Mnd1	family
GreA_GreB_N	PF03449.10	gi|479325906|ref|YP_007865961.1|	-	0.26	11.3	2.8	0.21	11.6	0.5	1.8	2	0	0	2	2	2	0	Transcription	elongation	factor,	N-terminal
HR1	PF02185.11	gi|479325906|ref|YP_007865961.1|	-	0.26	11.0	3.7	0.46	10.2	2.5	1.4	1	1	0	1	1	1	0	Hr1	repeat
Snapin_Pallidin	PF14712.1	gi|479325906|ref|YP_007865961.1|	-	0.32	11.3	3.5	1.6	9.0	2.5	1.8	1	1	0	1	1	1	0	Snapin/Pallidin
TMF_TATA_bd	PF12325.3	gi|479325906|ref|YP_007865961.1|	-	0.44	10.2	4.6	1.3	8.7	0.8	2.0	1	1	0	1	1	1	0	TATA	element	modulatory	factor	1	TATA	binding
TSC22	PF01166.13	gi|479325906|ref|YP_007865961.1|	-	1	9.3	4.1	1.4	8.9	0.8	2.0	2	0	0	2	2	2	0	TSC-22/dip/bun	family
bZIP_1	PF00170.16	gi|479325906|ref|YP_007865961.1|	-	1.7	8.6	9.1	0.11	12.5	1.4	2.0	2	0	0	2	2	2	0	bZIP	transcription	factor
Spc24	PF08286.6	gi|479325906|ref|YP_007865961.1|	-	1.8	8.2	4.9	1.3	8.7	0.8	2.0	1	1	1	2	2	2	0	Spc24	subunit	of	Ndc80
MttA_Hcf106	PF02416.11	gi|479325907|ref|YP_007865962.1|	-	4e-12	45.0	2.3	8.1e-12	44.0	1.6	1.7	1	1	0	1	1	1	1	mttA/Hcf106	family
DUF3829	PF12889.2	gi|479325907|ref|YP_007865962.1|	-	0.017	14.2	1.7	0.022	13.9	1.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3829)
Blo-t-5	PF11642.3	gi|479325907|ref|YP_007865962.1|	-	0.019	14.7	2.5	0.027	14.2	1.7	1.4	1	0	0	1	1	1	0	Mite	allergen	Blo	t	5
DUF2837	PF10997.3	gi|479325907|ref|YP_007865962.1|	-	0.025	13.7	0.0	0.029	13.5	0.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2837)
DUF3573	PF12097.3	gi|479325907|ref|YP_007865962.1|	-	0.025	13.1	0.9	0.027	13.0	0.6	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3573)
DUF3294	PF07957.6	gi|479325907|ref|YP_007865962.1|	-	0.043	13.3	6.8	0.056	12.9	4.7	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3294)
DUF4330	PF14221.1	gi|479325907|ref|YP_007865962.1|	-	0.081	12.7	0.0	0.096	12.5	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4330)
DUF4094	PF13334.1	gi|479325907|ref|YP_007865962.1|	-	0.081	13.3	3.6	0.13	12.6	2.5	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4094)
FliD_N	PF02465.13	gi|479325907|ref|YP_007865962.1|	-	0.15	12.4	5.8	0.18	12.1	4.0	1.1	1	0	0	1	1	1	0	Flagellar	hook-associated	protein	2	N-terminus
DUF4446	PF14584.1	gi|479325907|ref|YP_007865962.1|	-	0.15	11.8	3.5	0.29	10.9	2.4	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4446)
Prominin	PF05478.6	gi|479325907|ref|YP_007865962.1|	-	0.19	9.2	9.1	0.032	11.8	3.4	1.6	1	1	0	2	2	2	0	Prominin
DUF4140	PF13600.1	gi|479325907|ref|YP_007865962.1|	-	0.29	11.5	4.5	0.38	11.2	3.1	1.2	1	0	0	1	1	1	0	N-terminal	domain	of	unknown	function	(DUF4140)
DUF2968	PF11180.3	gi|479325907|ref|YP_007865962.1|	-	0.85	8.9	11.0	1.1	8.6	7.7	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2968)
SlyX	PF04102.7	gi|479325907|ref|YP_007865962.1|	-	1.1	9.7	12.4	1.5	9.2	8.6	1.3	1	0	0	1	1	1	0	SlyX
HR1	PF02185.11	gi|479325907|ref|YP_007865962.1|	-	1.1	9.0	12.7	2	8.1	8.8	1.5	1	1	0	1	1	1	0	Hr1	repeat
DUF4407	PF14362.1	gi|479325907|ref|YP_007865962.1|	-	1.2	8.0	7.5	1.5	7.6	5.2	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
Spc24	PF08286.6	gi|479325907|ref|YP_007865962.1|	-	5.5	6.7	8.8	20	4.9	6.2	1.8	1	1	1	2	2	2	0	Spc24	subunit	of	Ndc80
bZIP_2	PF07716.10	gi|479325907|ref|YP_007865962.1|	-	6	6.7	15.2	0.76	9.6	4.0	2.2	1	1	1	2	2	2	0	Basic	region	leucine	zipper
HAD_2	PF13419.1	gi|479325908|ref|YP_007865963.1|	-	1.4e-23	83.9	0.0	1.8e-23	83.6	0.0	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|479325908|ref|YP_007865963.1|	-	1e-12	48.9	0.7	5.1e-11	43.3	0.5	2.0	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.2	gi|479325908|ref|YP_007865963.1|	-	8.4e-11	42.3	0.0	1.1e-10	41.9	0.0	1.2	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|479325908|ref|YP_007865963.1|	-	2.1e-06	27.3	0.0	4.9e-06	26.1	0.0	1.7	2	0	0	2	2	2	1	HAD-hyrolase-like
Hydrolase_6	PF13344.1	gi|479325908|ref|YP_007865963.1|	-	0.0024	17.7	0.1	0.62	9.9	0.0	2.4	2	0	0	2	2	2	2	Haloacid	dehalogenase-like	hydrolase
NIF	PF03031.13	gi|479325908|ref|YP_007865963.1|	-	0.008	15.8	0.2	0.14	11.8	0.1	2.2	1	1	0	1	1	1	1	NLI	interacting	factor-like	phosphatase
Hydrolase_3	PF08282.7	gi|479325908|ref|YP_007865963.1|	-	0.39	10.2	2.8	3.2	7.2	0.8	2.7	2	1	0	2	2	2	0	haloacid	dehalogenase-like	hydrolase
Radical_SAM	PF04055.16	gi|479325909|ref|YP_007865964.1|	-	8.8e-21	74.7	0.0	1.8e-20	73.7	0.0	1.6	1	0	0	1	1	1	1	Radical	SAM	superfamily
Acetyltransf_1	PF00583.19	gi|479325909|ref|YP_007865964.1|	-	1.2e-08	34.8	0.2	3.2e-08	33.4	0.1	1.8	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	family
Acetyltransf_4	PF13420.1	gi|479325909|ref|YP_007865964.1|	-	0.023	14.6	0.0	6.8	6.6	0.0	3.3	3	0	0	3	3	3	0	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.1	gi|479325909|ref|YP_007865964.1|	-	0.037	14.1	0.4	0.26	11.4	0.2	2.3	2	0	0	2	2	2	0	Acetyltransferase	(GNAT)	domain
HobA	PF12163.3	gi|479325909|ref|YP_007865964.1|	-	0.13	11.5	0.0	0.22	10.8	0.0	1.3	1	0	0	1	1	1	0	DNA	replication	regulator
Methyltransf_11	PF08241.7	gi|479325910|ref|YP_007865965.1|	-	2e-21	76.2	0.0	2.8e-21	75.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|479325910|ref|YP_007865965.1|	-	1.8e-13	50.3	0.0	2.2e-13	50.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|479325910|ref|YP_007865965.1|	-	2e-12	47.1	0.0	2.6e-12	46.7	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|479325910|ref|YP_007865965.1|	-	3.4e-10	40.1	0.1	4.9e-10	39.6	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|479325910|ref|YP_007865965.1|	-	7.9e-08	32.6	0.0	1.2e-07	32.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|479325910|ref|YP_007865965.1|	-	2.5e-07	30.0	0.0	3.8e-07	29.4	0.0	1.3	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_8	PF05148.10	gi|479325910|ref|YP_007865965.1|	-	6.8e-06	25.8	0.0	1e-05	25.2	0.0	1.2	1	0	0	1	1	1	1	Hypothetical	methyltransferase
MetW	PF07021.7	gi|479325910|ref|YP_007865965.1|	-	0.00058	19.2	0.1	0.00075	18.9	0.1	1.1	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
Methyltransf_18	PF12847.2	gi|479325910|ref|YP_007865965.1|	-	0.002	18.7	0.2	0.006	17.1	0.2	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.15	gi|479325910|ref|YP_007865965.1|	-	0.0023	17.0	0.0	0.0031	16.6	0.0	1.2	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_15	PF09445.5	gi|479325910|ref|YP_007865965.1|	-	0.011	15.3	0.0	0.017	14.7	0.0	1.4	1	0	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
PCMT	PF01135.14	gi|479325910|ref|YP_007865965.1|	-	0.055	13.0	0.1	0.15	11.5	0.1	1.7	1	1	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_9	PF08003.6	gi|479325910|ref|YP_007865965.1|	-	0.067	11.8	0.1	0.14	10.8	0.0	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1698)
TehB	PF03848.9	gi|479325910|ref|YP_007865965.1|	-	0.11	11.6	0.1	0.22	10.6	0.1	1.6	1	0	0	1	1	1	0	Tellurite	resistance	protein	TehB
MTS	PF05175.9	gi|479325910|ref|YP_007865965.1|	-	0.16	11.2	0.7	0.89	8.9	0.5	1.9	1	1	0	1	1	1	0	Methyltransferase	small	domain
PmbA_TldD	PF01523.11	gi|479325911|ref|YP_007865966.1|	-	4.3e-15	55.7	0.1	1.2e-14	54.3	0.0	1.7	1	1	1	2	2	2	1	Putative	modulator	of	DNA	gyrase
Radical_SAM	PF04055.16	gi|479325912|ref|YP_007865967.1|	-	4.3e-21	75.8	0.0	3.5e-20	72.8	0.0	2.1	2	0	0	2	2	2	1	Radical	SAM	superfamily
B12-binding	PF02310.14	gi|479325912|ref|YP_007865967.1|	-	0.00018	21.3	0.0	0.00042	20.1	0.0	1.6	1	0	0	1	1	1	1	B12	binding	domain
DUF790	PF05626.6	gi|479325913|ref|YP_007865968.1|	-	1.8e-135	451.3	10.0	1.8e-135	451.3	6.9	1.4	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF790)
ResIII	PF04851.10	gi|479325914|ref|YP_007865969.1|	-	3.5e-25	88.9	0.1	1e-23	84.1	0.0	2.6	2	1	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.26	gi|479325914|ref|YP_007865969.1|	-	1.3e-17	63.4	0.0	3.3e-17	62.1	0.0	1.7	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
DEAD	PF00270.24	gi|479325914|ref|YP_007865969.1|	-	1.1e-11	44.5	0.0	3.5e-11	42.8	0.0	1.9	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
SNF2_N	PF00176.18	gi|479325914|ref|YP_007865969.1|	-	1.4e-09	37.1	0.3	1.5e-06	27.2	0.0	3.4	1	1	1	2	2	2	2	SNF2	family	N-terminal	domain
Helicase_C_2	PF13307.1	gi|479325914|ref|YP_007865969.1|	-	0.037	13.9	0.2	0.7	9.8	0.0	2.7	3	0	0	3	3	3	0	Helicase	C-terminal	domain
GATase_2	PF00310.16	gi|479325914|ref|YP_007865969.1|	-	0.067	11.8	0.0	0.11	11.1	0.0	1.2	1	0	0	1	1	1	0	Glutamine	amidotransferases	class-II
ADH_N	PF08240.7	gi|479325915|ref|YP_007865970.1|	-	7e-31	106.2	3.7	1.3e-30	105.3	0.1	2.3	2	0	0	2	2	2	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|479325915|ref|YP_007865970.1|	-	6.9e-30	103.2	0.8	1.2e-29	102.4	0.6	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|479325915|ref|YP_007865970.1|	-	1.9e-08	35.2	0.1	9.7e-08	32.9	0.0	2.0	2	0	0	2	2	2	1	Zinc-binding	dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|479325915|ref|YP_007865970.1|	-	0.015	14.4	0.3	0.028	13.5	0.2	1.4	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_3	PF03447.11	gi|479325915|ref|YP_007865970.1|	-	0.016	15.5	1.8	0.027	14.8	1.2	1.4	1	0	0	1	1	1	0	Homoserine	dehydrogenase,	NAD	binding	domain
ThiF	PF00899.16	gi|479325915|ref|YP_007865970.1|	-	0.03	14.1	2.4	0.03	14.1	1.6	1.7	2	0	0	2	2	2	0	ThiF	family
DUF131	PF01998.12	gi|479325916|ref|YP_007865971.1|	-	2.2e-13	49.3	6.7	2.2e-13	49.3	4.6	1.8	1	1	1	2	2	2	1	Protein	of	unknown	function	DUF131
DUF4064	PF13273.1	gi|479325916|ref|YP_007865971.1|	-	0.005	16.9	7.1	0.0067	16.5	4.9	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4064)
DUF872	PF05915.7	gi|479325916|ref|YP_007865971.1|	-	0.01	15.6	1.7	0.01	15.6	1.2	2.0	1	1	1	2	2	2	0	Eukaryotic	protein	of	unknown	function	(DUF872)
Adeno_E3_CR2	PF02439.10	gi|479325916|ref|YP_007865971.1|	-	0.013	15.0	2.5	0.013	15.0	1.7	2.1	2	0	0	2	2	2	0	Adenovirus	E3	region	protein	CR2
DUF3185	PF11381.3	gi|479325916|ref|YP_007865971.1|	-	0.23	11.2	0.3	0.23	11.2	0.2	3.0	2	2	1	3	3	3	0	Protein	of	unknown	function	(DUF3185)
HemY_N	PF07219.8	gi|479325916|ref|YP_007865971.1|	-	0.26	10.8	3.0	0.6	9.6	0.3	2.0	2	0	0	2	2	2	0	HemY	protein	N-terminus
Fig1	PF12351.3	gi|479325916|ref|YP_007865971.1|	-	0.28	11.0	6.4	4.7	7.0	0.1	2.0	2	0	0	2	2	2	0	Ca2+	regulator	and	membrane	fusion	protein	Fig1
DUF4131	PF13567.1	gi|479325916|ref|YP_007865971.1|	-	0.28	10.5	5.5	0.19	11.1	0.3	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4131)
Claudin_3	PF06653.6	gi|479325916|ref|YP_007865971.1|	-	0.34	10.6	4.3	0.47	10.1	3.0	1.2	1	0	0	1	1	1	0	Tight	junction	protein,	Claudin-like
DAP10	PF07213.6	gi|479325916|ref|YP_007865971.1|	-	0.43	10.3	4.4	0.76	9.5	3.1	1.6	1	1	0	1	1	1	0	DAP10	membrane	protein
DUF3021	PF11457.3	gi|479325916|ref|YP_007865971.1|	-	0.48	10.2	8.3	1.9	8.3	5.5	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3021)
Yip1	PF04893.12	gi|479325916|ref|YP_007865971.1|	-	0.7	9.3	10.3	0.91	9.0	7.2	1.2	1	0	0	1	1	1	0	Yip1	domain
SH	PF01445.12	gi|479325916|ref|YP_007865971.1|	-	0.89	9.2	7.0	0.56	9.8	0.6	2.2	2	0	0	2	2	2	0	Viral	small	hydrophobic	protein
Corona_M	PF01635.13	gi|479325916|ref|YP_007865971.1|	-	2.5	7.0	7.7	3.9	6.3	5.4	1.3	1	1	0	1	1	1	0	Coronavirus	M	matrix/glycoprotein
DUF3923	PF13061.1	gi|479325916|ref|YP_007865971.1|	-	2.5	8.0	10.2	0.68	9.8	2.3	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3923)
OAD_gamma	PF04277.8	gi|479325916|ref|YP_007865971.1|	-	2.5	8.5	7.9	6.4	7.2	2.1	2.1	2	0	0	2	2	2	0	Oxaloacetate	decarboxylase,	gamma	chain
PspC	PF04024.7	gi|479325916|ref|YP_007865971.1|	-	3	7.3	6.8	1.6	8.2	1.6	2.1	2	0	0	2	2	2	0	PspC	domain
ABC2_membrane_2	PF12679.2	gi|479325916|ref|YP_007865971.1|	-	3.4	6.4	8.9	4.3	6.1	6.2	1.2	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
DUF4097	PF13349.1	gi|479325916|ref|YP_007865971.1|	-	5.6	6.4	9.9	0.47	9.9	0.2	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4097)
DUF3671	PF12420.3	gi|479325916|ref|YP_007865971.1|	-	5.6	6.9	6.3	7.7	6.5	4.4	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function
DUF2207	PF09972.4	gi|479325916|ref|YP_007865971.1|	-	6.4	5.2	8.4	7.9	4.9	5.8	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
YebO	PF13974.1	gi|479325916|ref|YP_007865971.1|	-	7.1	6.4	6.4	1.6	8.5	0.9	2.1	2	0	0	2	2	2	0	YebO-like	protein
Competence	PF03772.11	gi|479325916|ref|YP_007865971.1|	-	7.3	5.5	12.9	12	4.9	9.0	1.3	1	1	0	1	1	1	0	Competence	protein
SseB_C	PF14581.1	gi|479325918|ref|YP_007865973.1|	-	0.11	12.3	0.0	0.14	12.0	0.0	1.2	1	0	0	1	1	1	0	SseB	protein	C-terminal	domain
DUF87	PF01935.12	gi|479325919|ref|YP_007865974.1|	-	2e-19	70.3	3.1	2.2e-19	70.1	0.5	2.0	1	1	1	2	2	2	1	Domain	of	unknown	function	DUF87
AAA_10	PF12846.2	gi|479325919|ref|YP_007865974.1|	-	6.3e-13	48.8	1.8	1.1e-12	48.0	1.2	1.4	1	1	0	1	1	1	1	AAA-like	domain
FtsK_SpoIIIE	PF01580.13	gi|479325919|ref|YP_007865974.1|	-	6.9e-05	22.4	0.1	0.0022	17.5	0.0	2.4	2	1	0	2	2	2	1	FtsK/SpoIIIE	family
AAA	PF00004.24	gi|479325919|ref|YP_007865974.1|	-	0.0072	16.5	0.1	1.3	9.2	0.0	3.1	3	0	0	3	3	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Zot	PF05707.7	gi|479325919|ref|YP_007865974.1|	-	0.012	15.1	0.0	0.042	13.3	0.0	1.9	2	0	0	2	2	2	0	Zonular	occludens	toxin	(Zot)
AAA_25	PF13481.1	gi|479325919|ref|YP_007865974.1|	-	0.035	13.5	0.5	3.9	6.8	0.0	2.7	3	0	0	3	3	3	0	AAA	domain
NurA	PF09376.5	gi|479325920|ref|YP_007865975.1|	-	8e-16	58.2	2.1	6.3e-12	45.5	1.5	2.3	1	1	0	1	1	1	1	NurA	domain
Aldolase_2	PF10120.4	gi|479325921|ref|YP_007865976.1|	-	4.4e-51	172.6	0.3	5.9e-51	172.2	0.2	1.1	1	0	0	1	1	1	1	Putative	aldolase
HTH_24	PF13412.1	gi|479325921|ref|YP_007865976.1|	-	0.006	15.9	0.1	0.12	11.8	0.0	2.5	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
MoCF_biosynth	PF00994.19	gi|479325921|ref|YP_007865976.1|	-	0.011	15.0	0.1	0.037	13.4	0.1	1.8	2	0	0	2	2	2	0	Probable	molybdopterin	binding	domain
HTH_37	PF13744.1	gi|479325921|ref|YP_007865976.1|	-	0.039	13.7	0.0	0.11	12.3	0.0	1.8	1	1	0	1	1	1	0	Helix-turn-helix	domain
YflT	PF11181.3	gi|479325921|ref|YP_007865976.1|	-	0.11	12.6	0.4	0.62	10.2	0.0	2.3	3	0	0	3	3	3	0	Heat	induced	stress	protein	YflT
MMPL	PF03176.10	gi|479325922|ref|YP_007865977.1|	-	4.2e-50	170.3	18.8	2.7e-28	98.6	4.6	2.1	2	0	0	2	2	2	2	MMPL	family
Sterol-sensing	PF12349.3	gi|479325922|ref|YP_007865977.1|	-	3.1	7.2	16.6	0.078	12.4	5.2	2.8	2	0	0	2	2	2	0	Sterol-sensing	domain	of	SREBP	cleavage-activation
Mistic	PF11458.3	gi|479325923|ref|YP_007865978.1|	-	0.024	15.0	0.2	0.025	14.9	0.2	1.1	1	0	0	1	1	1	0	Membrane-integrating	protein	Mistic
LINES_C	PF14695.1	gi|479325923|ref|YP_007865978.1|	-	0.33	10.2	1.4	0.99	8.7	0.0	2.3	3	0	0	3	3	3	0	Lines	C-terminus
Peptidase_M50	PF02163.17	gi|479325925|ref|YP_007865980.1|	-	4.6e-11	42.0	16.8	2.6e-10	39.5	11.7	2.4	1	1	0	1	1	1	1	Peptidase	family	M50
Rhomboid	PF01694.17	gi|479325926|ref|YP_007865981.1|	-	4.4e-18	65.7	16.4	4.4e-18	65.7	11.3	1.9	2	0	0	2	2	2	1	Rhomboid	family
DUF1751	PF08551.5	gi|479325926|ref|YP_007865981.1|	-	0.01	16.1	2.7	0.01	16.1	1.9	2.8	2	1	1	3	3	3	0	Eukaryotic	integral	membrane	protein	(DUF1751)
SpoIIIAC	PF06686.6	gi|479325927|ref|YP_007865982.1|	-	0.31	10.8	4.4	0.42	10.4	3.0	1.3	1	1	0	1	1	1	0	Stage	III	sporulation	protein	AC/AD	protein	family
AAA_18	PF13238.1	gi|479325928|ref|YP_007865983.1|	-	4.5e-18	65.7	0.7	6.4e-18	65.2	0.1	1.5	2	0	0	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|479325928|ref|YP_007865983.1|	-	9.7e-16	58.6	0.1	1.8e-15	57.8	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_5	PF07728.9	gi|479325928|ref|YP_007865983.1|	-	5.2e-06	26.2	0.1	2.6e-05	23.9	0.0	1.9	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
SKI	PF01202.17	gi|479325928|ref|YP_007865983.1|	-	8.1e-06	25.7	0.3	2.2e-05	24.3	0.2	1.7	1	1	0	1	1	1	1	Shikimate	kinase
AAA	PF00004.24	gi|479325928|ref|YP_007865983.1|	-	5.7e-05	23.3	0.2	0.00041	20.5	0.0	2.2	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
KTI12	PF08433.5	gi|479325928|ref|YP_007865983.1|	-	9e-05	21.8	0.5	0.00069	18.9	0.0	2.1	2	0	0	2	2	2	1	Chromatin	associated	protein	KTI12
NTPase_1	PF03266.10	gi|479325928|ref|YP_007865983.1|	-	0.00013	21.6	1.4	0.0034	17.1	0.0	2.9	2	1	1	3	3	3	1	NTPase
DUF2075	PF09848.4	gi|479325928|ref|YP_007865983.1|	-	0.00032	19.7	0.0	0.00034	19.6	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_22	PF13401.1	gi|479325928|ref|YP_007865983.1|	-	0.0011	19.1	0.3	0.0048	17.0	0.1	2.1	2	1	0	2	2	2	1	AAA	domain
AAA_33	PF13671.1	gi|479325928|ref|YP_007865983.1|	-	0.0028	17.5	0.0	0.0039	17.0	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_28	PF13521.1	gi|479325928|ref|YP_007865983.1|	-	0.0042	17.0	0.0	0.009	15.9	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
AAA_14	PF13173.1	gi|479325928|ref|YP_007865983.1|	-	0.0058	16.5	0.2	0.013	15.3	0.1	1.7	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|479325928|ref|YP_007865983.1|	-	0.0073	16.3	0.0	0.0083	16.1	0.0	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
PRK	PF00485.13	gi|479325928|ref|YP_007865983.1|	-	0.014	15.0	0.3	0.23	10.9	0.0	2.4	2	1	1	3	3	3	0	Phosphoribulokinase	/	Uridine	kinase	family
RNA_helicase	PF00910.17	gi|479325928|ref|YP_007865983.1|	-	0.016	15.3	0.0	0.04	14.0	0.0	1.8	1	0	0	1	1	1	0	RNA	helicase
AAA_19	PF13245.1	gi|479325928|ref|YP_007865983.1|	-	0.017	14.8	0.0	0.029	14.0	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_3	PF07726.6	gi|479325928|ref|YP_007865983.1|	-	0.022	14.3	0.0	0.041	13.4	0.0	1.4	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
6PF2K	PF01591.13	gi|479325928|ref|YP_007865983.1|	-	0.025	13.6	0.0	0.036	13.1	0.0	1.3	1	0	0	1	1	1	0	6-phosphofructo-2-kinase
Cytidylate_kin2	PF13189.1	gi|479325928|ref|YP_007865983.1|	-	0.026	14.4	0.1	0.049	13.5	0.0	1.6	1	1	0	1	1	1	0	Cytidylate	kinase-like	family
cobW	PF02492.14	gi|479325928|ref|YP_007865983.1|	-	0.031	13.7	0.2	0.14	11.6	0.0	2.0	1	1	1	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
Zeta_toxin	PF06414.7	gi|479325928|ref|YP_007865983.1|	-	0.033	13.2	0.1	0.099	11.7	0.1	1.9	1	1	0	1	1	1	0	Zeta	toxin
AAA_26	PF13500.1	gi|479325928|ref|YP_007865983.1|	-	0.043	13.4	1.7	0.16	11.5	1.2	2.1	1	1	0	1	1	1	0	AAA	domain
NACHT	PF05729.7	gi|479325928|ref|YP_007865983.1|	-	0.055	13.1	0.1	0.15	11.7	0.0	1.7	1	1	0	2	2	2	0	NACHT	domain
AAA_2	PF07724.9	gi|479325928|ref|YP_007865983.1|	-	0.071	13.0	1.2	0.55	10.1	0.0	2.3	2	1	0	2	2	2	0	AAA	domain	(Cdc48	subfamily)
DnaB_C	PF03796.10	gi|479325928|ref|YP_007865983.1|	-	0.086	11.7	0.0	5.5	5.7	0.0	2.3	2	0	0	2	2	2	0	DnaB-like	helicase	C	terminal	domain
KaiC	PF06745.8	gi|479325928|ref|YP_007865983.1|	-	0.1	11.6	3.7	2.9	6.9	0.3	2.5	1	1	2	3	3	3	0	KaiC
AAA_24	PF13479.1	gi|479325928|ref|YP_007865983.1|	-	0.17	11.4	1.5	0.21	11.1	0.1	1.8	3	0	0	3	3	3	0	AAA	domain
ParA	PF10609.4	gi|479325929|ref|YP_007865984.1|	-	1.1e-31	108.5	0.2	2.9e-31	107.1	0.0	1.8	2	0	0	2	2	2	1	ParA/MinD	ATPase	like
CbiA	PF01656.18	gi|479325929|ref|YP_007865984.1|	-	8.1e-17	61.2	0.0	1.7e-16	60.2	0.0	1.5	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Fer4_NifH	PF00142.13	gi|479325929|ref|YP_007865984.1|	-	1.2e-08	34.5	0.2	0.00014	21.1	0.1	2.3	2	0	0	2	2	2	2	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
AAA_31	PF13614.1	gi|479325929|ref|YP_007865984.1|	-	2e-08	34.3	0.0	8.9e-07	28.9	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
MipZ	PF09140.6	gi|479325929|ref|YP_007865984.1|	-	3.8e-06	26.1	0.0	7.6e-06	25.1	0.0	1.5	1	1	0	1	1	1	1	ATPase	MipZ
ArsA_ATPase	PF02374.10	gi|479325929|ref|YP_007865984.1|	-	2e-05	23.8	2.3	7.8e-05	21.8	0.5	2.2	2	1	0	2	2	2	1	Anion-transporting	ATPase
AAA_10	PF12846.2	gi|479325929|ref|YP_007865984.1|	-	0.00013	21.4	0.1	0.00017	21.1	0.1	1.2	1	0	0	1	1	1	1	AAA-like	domain
AAA_25	PF13481.1	gi|479325929|ref|YP_007865984.1|	-	0.0002	20.8	0.0	0.0057	16.0	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_26	PF13500.1	gi|479325929|ref|YP_007865984.1|	-	0.00067	19.3	0.0	1	8.9	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
ArgK	PF03308.11	gi|479325929|ref|YP_007865984.1|	-	0.00089	18.1	0.3	0.0015	17.3	0.2	1.3	1	0	0	1	1	1	1	ArgK	protein
DUF258	PF03193.11	gi|479325929|ref|YP_007865984.1|	-	0.14	11.3	0.1	0.22	10.7	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
DsrD	PF08679.6	gi|479325930|ref|YP_007865985.1|	-	0.00098	19.0	0.7	0.0012	18.7	0.1	1.5	2	0	0	2	2	2	1	Dissimilatory	sulfite	reductase	D	(DsrD)
TrmB	PF01978.14	gi|479325931|ref|YP_007865986.1|	-	2.9e-13	49.3	0.2	7.2e-13	48.0	0.1	1.7	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|479325931|ref|YP_007865986.1|	-	1.5e-07	30.9	0.0	2.4e-07	30.3	0.0	1.4	1	0	0	1	1	1	1	MarR	family
TFIIE_alpha	PF02002.12	gi|479325931|ref|YP_007865986.1|	-	4.2e-05	23.0	0.1	5.1e-05	22.7	0.1	1.1	1	0	0	1	1	1	1	TFIIE	alpha	subunit
MarR	PF01047.17	gi|479325931|ref|YP_007865986.1|	-	0.00012	21.7	0.5	0.00018	21.1	0.0	1.5	2	0	0	2	2	1	1	MarR	family
HTH_20	PF12840.2	gi|479325931|ref|YP_007865986.1|	-	0.00014	21.5	0.0	0.00024	20.8	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|479325931|ref|YP_007865986.1|	-	0.00016	21.2	0.0	0.00032	20.3	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_27	PF13463.1	gi|479325931|ref|YP_007865986.1|	-	0.00029	21.1	0.0	0.0005	20.3	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
Fe_dep_repress	PF01325.14	gi|479325931|ref|YP_007865986.1|	-	0.00043	20.1	0.1	0.00084	19.2	0.0	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_34	PF13601.1	gi|479325931|ref|YP_007865986.1|	-	0.00046	20.1	0.1	0.00068	19.6	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_24	PF13412.1	gi|479325931|ref|YP_007865986.1|	-	0.00073	18.8	0.1	0.0016	17.7	0.1	1.7	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
PadR	PF03551.9	gi|479325931|ref|YP_007865986.1|	-	0.0021	17.7	0.1	0.003	17.2	0.0	1.4	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_Crp_2	PF13545.1	gi|479325931|ref|YP_007865986.1|	-	0.0022	17.7	0.0	0.0038	16.9	0.0	1.4	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
DUF2250	PF10007.4	gi|479325931|ref|YP_007865986.1|	-	0.0041	17.0	0.3	0.0077	16.1	0.2	1.7	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Rrf2	PF02082.15	gi|479325931|ref|YP_007865986.1|	-	0.0072	16.4	0.0	0.012	15.7	0.0	1.3	1	0	0	1	1	1	1	Transcriptional	regulator
DUF4423	PF14394.1	gi|479325931|ref|YP_007865986.1|	-	0.017	14.6	0.1	0.024	14.2	0.1	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
HTH_IclR	PF09339.5	gi|479325931|ref|YP_007865986.1|	-	0.021	14.3	0.0	0.033	13.7	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
GPP34	PF05719.6	gi|479325931|ref|YP_007865986.1|	-	0.023	14.7	0.0	0.026	14.5	0.0	1.1	1	0	0	1	1	1	0	Golgi	phosphoprotein	3	(GPP34)
HTH_36	PF13730.1	gi|479325931|ref|YP_007865986.1|	-	0.024	14.7	0.1	0.088	12.9	0.1	2.0	1	1	1	2	2	2	0	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|479325931|ref|YP_007865986.1|	-	0.03	13.9	0.0	0.073	12.7	0.0	1.6	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_CodY	PF08222.6	gi|479325931|ref|YP_007865986.1|	-	0.041	13.2	0.1	0.06	12.6	0.1	1.3	1	0	0	1	1	1	0	CodY	helix-turn-helix	domain
SgrR_N	PF12793.2	gi|479325931|ref|YP_007865986.1|	-	0.053	13.5	0.0	0.067	13.2	0.0	1.1	1	0	0	1	1	1	0	Sugar	transport-related	sRNA	regulator	N-term
5-FTHF_cyc-lig	PF01812.15	gi|479325932|ref|YP_007865987.1|	-	1.3e-35	122.8	0.0	1.6e-35	122.6	0.0	1.1	1	0	0	1	1	1	1	5-formyltetrahydrofolate	cyclo-ligase	family
LysE	PF01810.13	gi|479325933|ref|YP_007865988.1|	-	3e-34	117.9	16.8	3.9e-34	117.6	11.7	1.1	1	0	0	1	1	1	1	LysE	type	translocator
DUF3693	PF12472.3	gi|479325933|ref|YP_007865988.1|	-	0.13	11.8	0.2	2.4	7.8	0.0	2.5	2	0	0	2	2	2	0	Phage	related	protein
DUF72	PF01904.13	gi|479325934|ref|YP_007865989.1|	-	3.6e-35	121.7	0.2	4.3e-35	121.5	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF72
HTH_23	PF13384.1	gi|479325935|ref|YP_007865990.1|	-	1.8e-14	52.8	0.1	6.9e-06	25.5	0.0	3.2	2	1	1	3	3	3	3	Homeodomain-like	domain
HTH_7	PF02796.10	gi|479325935|ref|YP_007865990.1|	-	3.2e-14	52.5	6.6	0.00016	21.4	0.4	3.2	3	0	0	3	3	3	3	Helix-turn-helix	domain	of	resolvase
HTH_28	PF13518.1	gi|479325935|ref|YP_007865990.1|	-	6.2e-14	51.6	1.4	0.00033	20.6	0.0	3.1	2	1	1	3	3	3	3	Helix-turn-helix	domain
HTH_38	PF13936.1	gi|479325935|ref|YP_007865990.1|	-	5.8e-12	44.9	4.5	0.00033	20.1	0.2	3.1	3	0	0	3	3	3	3	Helix-turn-helix	domain
GerE	PF00196.14	gi|479325935|ref|YP_007865990.1|	-	1.3e-09	37.1	1.2	0.025	13.9	0.1	3.2	3	0	0	3	3	3	3	Bacterial	regulatory	proteins,	luxR	family
HTH_40	PF14493.1	gi|479325935|ref|YP_007865990.1|	-	1.1e-08	35.2	1.4	0.044	14.0	0.1	3.3	1	1	2	3	3	3	3	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|479325935|ref|YP_007865990.1|	-	9e-08	31.3	0.5	0.16	11.3	0.0	3.2	3	0	0	3	3	3	2	Winged	helix-turn-helix	DNA-binding
Terminase_5	PF06056.7	gi|479325935|ref|YP_007865990.1|	-	2.2e-07	30.3	0.7	0.14	11.7	0.0	3.2	3	0	0	3	3	3	3	Putative	ATPase	subunit	of	terminase	(gpP-like)
GcrA	PF07750.6	gi|479325935|ref|YP_007865990.1|	-	3.3e-07	30.6	0.2	0.014	15.6	0.0	3.0	1	1	1	3	3	3	2	GcrA	cell	cycle	regulator
Sigma70_r4_2	PF08281.7	gi|479325935|ref|YP_007865990.1|	-	3.4e-07	29.6	0.9	0.0011	18.4	0.1	3.2	3	0	0	3	3	3	1	Sigma-70,	region	4
IF2_N	PF04760.10	gi|479325935|ref|YP_007865990.1|	-	7.8e-07	28.6	3.6	0.018	14.6	0.1	3.5	1	1	2	3	3	3	2	Translation	initiation	factor	IF-2,	N-terminal	region
HTH_29	PF13551.1	gi|479325935|ref|YP_007865990.1|	-	2.3e-06	27.7	0.2	0.15	12.1	0.0	3.0	2	1	1	3	3	3	2	Winged	helix-turn	helix
HTH_Tnp_IS630	PF01710.11	gi|479325935|ref|YP_007865990.1|	-	3.8e-06	26.5	3.8	4.8e-06	26.2	1.8	1.6	1	1	1	2	2	2	1	Transposase
HTH_10	PF04967.7	gi|479325935|ref|YP_007865990.1|	-	4.9e-06	26.0	0.1	0.044	13.3	0.0	3.2	3	0	0	3	3	3	1	HTH	DNA	binding	domain
HTH_11	PF08279.7	gi|479325935|ref|YP_007865990.1|	-	2e-05	24.1	0.7	0.69	9.6	0.0	3.2	3	0	0	3	3	3	1	HTH	domain
HTH_Tnp_IS1	PF12759.2	gi|479325935|ref|YP_007865990.1|	-	2.7e-05	23.4	0.3	0.037	13.4	0.0	2.5	3	0	0	3	3	2	2	InsA	C-terminal	domain
Sigma70_r4	PF04545.11	gi|479325935|ref|YP_007865990.1|	-	3.6e-05	22.9	1.0	0.004	16.4	0.1	2.8	3	0	0	3	3	3	1	Sigma-70,	region	4
HTH_Tnp_ISL3	PF13542.1	gi|479325935|ref|YP_007865990.1|	-	5.1e-05	22.3	0.0	0.089	11.9	0.0	3.1	3	0	0	3	3	3	1	Helix-turn-helix	domain	of	transposase	family	ISL3
DUF2316	PF10078.4	gi|479325935|ref|YP_007865990.1|	-	0.00014	21.7	0.2	1.7	8.7	0.0	3.1	1	1	2	3	3	3	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2316)
HTH_6	PF01418.12	gi|479325935|ref|YP_007865990.1|	-	0.0002	21.0	0.1	0.87	9.3	0.0	3.3	2	1	1	3	3	3	1	Helix-turn-helix	domain,	rpiR	family
HTH_Tnp_1	PF01527.15	gi|479325935|ref|YP_007865990.1|	-	0.00027	20.8	0.2	2.6	8.0	0.1	3.1	2	1	1	3	3	3	0	Transposase
Recombinase	PF07508.8	gi|479325935|ref|YP_007865990.1|	-	0.00033	20.8	4.4	1.8	8.8	0.4	3.8	2	1	1	3	3	3	1	Recombinase
DUF3791	PF12668.2	gi|479325935|ref|YP_007865990.1|	-	0.00053	19.5	1.5	5	6.8	0.1	3.3	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3791)
HTH_3	PF01381.17	gi|479325935|ref|YP_007865990.1|	-	0.00067	19.4	3.2	4.5	7.1	0.1	3.3	2	1	1	3	3	3	0	Helix-turn-helix
HTH_5	PF01022.15	gi|479325935|ref|YP_007865990.1|	-	0.00088	18.8	0.0	1	9.0	0.0	2.5	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
Phage_terminase	PF10668.4	gi|479325935|ref|YP_007865990.1|	-	0.00095	18.8	3.1	0.76	9.6	0.2	3.0	2	1	1	3	3	3	1	Phage	terminase	small	subunit
TrmB	PF01978.14	gi|479325935|ref|YP_007865990.1|	-	0.001	18.7	0.6	1.5	8.5	0.0	3.6	3	1	1	4	4	4	1	Sugar-specific	transcriptional	regulator	TrmB
PAX	PF00292.13	gi|479325935|ref|YP_007865990.1|	-	0.0011	18.6	0.1	0.0045	16.6	0.0	2.0	1	1	2	3	3	3	1	'Paired	box'	domain
HTH_25	PF13413.1	gi|479325935|ref|YP_007865990.1|	-	0.0021	17.6	0.2	1.7	8.2	0.0	3.2	3	0	0	3	3	3	1	Helix-turn-helix	domain
NUMOD1	PF07453.8	gi|479325935|ref|YP_007865990.1|	-	0.0039	16.9	2.9	0.21	11.4	0.2	3.2	3	0	0	3	3	3	1	NUMOD1	domain
Sigma70_ECF	PF07638.6	gi|479325935|ref|YP_007865990.1|	-	0.0061	16.2	0.1	4.6	6.8	0.0	2.9	1	1	1	3	3	3	0	ECF	sigma	factor
HTH_26	PF13443.1	gi|479325935|ref|YP_007865990.1|	-	0.0069	16.5	1.4	5.3	7.3	0.1	3.1	2	1	1	3	3	3	0	Cro/C1-type	HTH	DNA-binding	domain
ANT	PF03374.9	gi|479325935|ref|YP_007865990.1|	-	0.0078	16.2	0.1	0.17	11.9	0.0	2.2	2	1	0	2	2	2	1	Phage	antirepressor	protein	KilAC	domain
FeoC	PF09012.5	gi|479325935|ref|YP_007865990.1|	-	0.008	15.8	0.0	3.2	7.5	0.0	3.1	3	0	0	3	3	3	0	FeoC	like	transcriptional	regulator
RPA_C	PF08784.6	gi|479325935|ref|YP_007865990.1|	-	0.0096	16.3	0.1	2.6	8.4	0.0	3.0	1	1	1	3	3	3	0	Replication	protein	A	C	terminal
Phage_antitermQ	PF06530.7	gi|479325935|ref|YP_007865990.1|	-	0.01	15.4	1.6	2	7.9	0.0	2.3	1	1	0	2	2	2	1	Phage	antitermination	protein	Q
HTH_30	PF13556.1	gi|479325935|ref|YP_007865990.1|	-	0.01	15.3	0.0	4.8	6.8	0.0	3.0	3	0	0	3	3	3	0	PucR	C-terminal	helix-turn-helix	domain
EAP30	PF04157.11	gi|479325935|ref|YP_007865990.1|	-	0.012	14.8	0.3	0.94	8.5	0.0	2.2	2	1	0	2	2	2	0	EAP30/Vps36	family
Homeobox	PF00046.24	gi|479325935|ref|YP_007865990.1|	-	0.019	14.5	1.6	6.3	6.5	0.0	3.3	2	1	2	4	4	4	0	Homeobox	domain
Cadherin_2	PF08266.7	gi|479325935|ref|YP_007865990.1|	-	0.02	14.4	0.1	1	8.9	0.0	2.9	2	1	1	3	3	3	0	Cadherin-like
HTH_IclR	PF09339.5	gi|479325935|ref|YP_007865990.1|	-	0.02	14.4	0.0	0.045	13.3	0.0	1.6	2	0	0	2	2	1	0	IclR	helix-turn-helix	domain
DUF1699	PF08004.6	gi|479325935|ref|YP_007865990.1|	-	0.026	14.0	2.5	1.5	8.3	0.0	2.3	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1699)
CENP-B_N	PF04218.8	gi|479325935|ref|YP_007865990.1|	-	0.027	13.8	7.0	1.1	8.7	0.1	3.1	3	0	0	3	3	3	0	CENP-B	N-terminal	DNA-binding	domain
Ribosomal_S2	PF00318.15	gi|479325935|ref|YP_007865990.1|	-	0.038	13.2	3.6	0.042	13.0	2.5	1.0	1	0	0	1	1	1	0	Ribosomal	protein	S2
CPSase_L_D3	PF02787.14	gi|479325935|ref|YP_007865990.1|	-	0.04	13.6	1.7	2.1	8.1	0.4	2.4	1	1	1	2	2	2	0	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
Ribosomal_S13	PF00416.17	gi|479325935|ref|YP_007865990.1|	-	0.045	14.2	3.1	0.048	14.1	0.9	1.8	1	1	1	2	2	2	0	Ribosomal	protein	S13/S18
Rho_N	PF07498.7	gi|479325935|ref|YP_007865990.1|	-	0.057	13.1	0.4	14	5.5	0.0	3.0	3	0	0	3	3	2	0	Rho	termination	factor,	N-terminal	domain
MarR	PF01047.17	gi|479325935|ref|YP_007865990.1|	-	0.074	12.7	0.0	7.5	6.3	0.0	2.6	3	0	0	3	3	2	0	MarR	family
HTH_32	PF13565.1	gi|479325935|ref|YP_007865990.1|	-	0.078	13.7	0.5	11	6.9	0.0	2.6	3	0	0	3	3	2	0	Homeodomain-like	domain
TBCA	PF02970.11	gi|479325935|ref|YP_007865990.1|	-	0.092	12.8	1.0	0.17	11.9	0.7	1.5	1	0	0	1	1	1	0	Tubulin	binding	cofactor	A
MRP-L20	PF12824.2	gi|479325935|ref|YP_007865990.1|	-	0.11	12.4	0.4	0.25	11.2	0.3	1.7	1	1	0	1	1	1	0	Mitochondrial	ribosomal	protein	subunit	L20
HTH_AsnC-type	PF13404.1	gi|479325935|ref|YP_007865990.1|	-	0.11	11.9	0.0	2.7	7.6	0.0	2.7	3	0	0	3	3	3	0	AsnC-type	helix-turn-helix	domain
HTH_AraC	PF00165.18	gi|479325935|ref|YP_007865990.1|	-	0.12	12.2	0.3	2.6	8.0	0.0	2.6	3	0	0	3	3	2	0	Bacterial	regulatory	helix-turn-helix	proteins,	AraC	family
UPF0122	PF04297.9	gi|479325935|ref|YP_007865990.1|	-	0.14	12.2	2.0	4.6	7.3	0.2	2.8	2	1	1	3	3	3	0	Putative	helix-turn-helix	protein,	YlxM	/	p13	like
DUF2089	PF09862.4	gi|479325935|ref|YP_007865990.1|	-	0.3	10.8	3.9	3.7	7.3	0.1	2.8	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF2089)
HTH_17	PF12728.2	gi|479325935|ref|YP_007865990.1|	-	0.31	11.3	4.3	12	6.2	2.7	2.8	1	1	1	2	2	2	0	Helix-turn-helix	domain
HTH_21	PF13276.1	gi|479325935|ref|YP_007865990.1|	-	6.7	6.8	9.0	7.4	6.6	1.7	3.8	1	1	1	2	2	2	0	HTH-like	domain
tRNA-synt_1b	PF00579.20	gi|479325936|ref|YP_007865991.1|	-	3.1e-27	95.4	0.0	4.7e-27	94.8	0.0	1.3	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(W	and	Y)
Snf7	PF03357.16	gi|479325937|ref|YP_007865992.1|	-	0.00058	19.2	0.3	0.00067	19.0	0.2	1.3	1	0	0	1	1	1	1	Snf7
DUF1796	PF08795.5	gi|479325937|ref|YP_007865992.1|	-	0.0019	17.8	0.6	0.025	14.1	0.4	2.1	1	1	0	1	1	1	1	Putative	papain-like	cysteine	peptidase	(DUF1796)
LOH1CR12	PF10158.4	gi|479325937|ref|YP_007865992.1|	-	0.0067	16.2	1.1	0.013	15.2	0.8	1.5	1	1	0	1	1	1	1	Tumour	suppressor	protein
DUF3958	PF13125.1	gi|479325937|ref|YP_007865992.1|	-	0.047	13.5	0.1	0.097	12.5	0.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3958)
NHL	PF01436.16	gi|479325938|ref|YP_007865993.1|	-	0.00013	21.7	0.3	0.00025	20.8	0.2	1.5	1	0	0	1	1	1	1	NHL	repeat
tRNA-synt_2c	PF01411.14	gi|479325939|ref|YP_007865994.1|	-	1.1e-13	50.3	0.1	1.6e-13	49.8	0.1	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(A)
tRNA_SAD	PF07973.9	gi|479325939|ref|YP_007865994.1|	-	4.3e-13	48.9	0.3	1.7e-12	47.0	0.1	2.0	2	0	0	2	2	2	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
DPM2	PF07297.7	gi|479325939|ref|YP_007865994.1|	-	0.1	12.8	0.0	0.23	11.7	0.0	1.5	1	0	0	1	1	1	0	Dolichol	phosphate-mannose	biosynthesis	regulatory	protein	(DPM2)
GtrA	PF04138.9	gi|479325940|ref|YP_007865995.1|	-	5.1e-21	74.8	14.6	8e-21	74.1	10.1	1.3	1	0	0	1	1	1	1	GtrA-like	protein
MHYT	PF03707.11	gi|479325940|ref|YP_007865995.1|	-	7.7	6.7	8.1	4	7.6	1.4	2.4	2	1	0	2	2	2	0	Bacterial	signalling	protein	N	terminal	repeat
Aminotran_1_2	PF00155.16	gi|479325941|ref|YP_007865996.1|	-	1.7e-14	53.5	0.0	9.6e-14	51.0	0.0	1.9	2	0	0	2	2	2	1	Aminotransferase	class	I	and	II
FATC	PF02260.15	gi|479325941|ref|YP_007865996.1|	-	0.022	14.1	0.0	0.14	11.6	0.0	2.3	2	0	0	2	2	2	0	FATC	domain
HTH_10	PF04967.7	gi|479325942|ref|YP_007865997.1|	-	1.8e-21	75.4	0.1	3e-21	74.7	0.0	1.4	1	0	0	1	1	1	1	HTH	DNA	binding	domain
HTH_24	PF13412.1	gi|479325942|ref|YP_007865997.1|	-	0.00027	20.2	0.1	0.0008	18.7	0.0	1.8	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_27	PF13463.1	gi|479325942|ref|YP_007865997.1|	-	0.00098	19.3	0.0	0.0058	16.9	0.0	2.2	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|479325942|ref|YP_007865997.1|	-	0.0013	18.3	0.1	0.003	17.2	0.1	1.7	1	1	0	1	1	1	1	MarR	family
MarR	PF01047.17	gi|479325942|ref|YP_007865997.1|	-	0.0018	17.9	0.0	0.0038	16.8	0.0	1.5	1	0	0	1	1	1	1	MarR	family
HTH_Mga	PF08280.6	gi|479325942|ref|YP_007865997.1|	-	0.0024	17.5	0.0	0.027	14.2	0.0	2.4	2	0	0	2	2	2	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
Fe_dep_repress	PF01325.14	gi|479325942|ref|YP_007865997.1|	-	0.0037	17.1	0.0	0.0072	16.2	0.0	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_3	PF01381.17	gi|479325942|ref|YP_007865997.1|	-	0.0043	16.8	0.0	0.0098	15.7	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix
HTH_18	PF12833.2	gi|479325942|ref|YP_007865997.1|	-	0.029	14.4	0.0	2.2	8.4	0.0	2.2	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_19	PF12844.2	gi|479325942|ref|YP_007865997.1|	-	0.058	13.4	0.0	0.13	12.2	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_AraC	PF00165.18	gi|479325942|ref|YP_007865997.1|	-	0.064	13.1	0.0	1.2	9.0	0.0	2.3	1	1	1	2	2	2	0	Bacterial	regulatory	helix-turn-helix	proteins,	AraC	family
HTH_1	PF00126.22	gi|479325942|ref|YP_007865997.1|	-	0.075	12.7	0.0	0.13	12.0	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
TFIIB	PF00382.14	gi|479325943|ref|YP_007865998.1|	-	1.5e-40	136.8	5.3	2e-20	72.3	0.6	2.2	2	0	0	2	2	2	2	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.7	gi|479325943|ref|YP_007865998.1|	-	3.8e-15	54.9	0.1	8.1e-15	53.8	0.1	1.5	1	0	0	1	1	1	1	TFIIB	zinc-binding
HTH_AsnC-type	PF13404.1	gi|479325943|ref|YP_007865998.1|	-	9.1e-06	25.1	0.2	0.00014	21.2	0.1	2.7	2	0	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
Sigma70_r4	PF04545.11	gi|479325943|ref|YP_007865998.1|	-	2.1e-05	23.7	1.3	0.00061	19.0	0.2	3.3	3	0	0	3	3	3	1	Sigma-70,	region	4
Cyclin_C	PF02984.14	gi|479325943|ref|YP_007865998.1|	-	2.8e-05	24.0	0.0	0.016	15.1	0.0	2.2	2	0	0	2	2	2	2	Cyclin,	C-terminal	domain
HTH_24	PF13412.1	gi|479325943|ref|YP_007865998.1|	-	0.00037	19.8	1.2	0.0019	17.5	0.0	2.7	3	0	0	3	3	3	1	Winged	helix-turn-helix	DNA-binding
Sigma70_r4_2	PF08281.7	gi|479325943|ref|YP_007865998.1|	-	0.00044	19.6	0.2	0.0078	15.6	0.0	2.8	2	0	0	2	2	2	1	Sigma-70,	region	4
HTH_Tnp_ISL3	PF13542.1	gi|479325943|ref|YP_007865998.1|	-	0.0028	16.7	2.2	0.12	11.6	0.1	3.2	3	0	0	3	3	3	1	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_11	PF08279.7	gi|479325943|ref|YP_007865998.1|	-	0.0041	16.7	0.1	0.014	15.0	0.1	1.9	1	0	0	1	1	1	1	HTH	domain
Cyclin_N	PF00134.18	gi|479325943|ref|YP_007865998.1|	-	0.0073	15.8	0.1	1.1	8.7	0.1	2.2	2	0	0	2	2	2	1	Cyclin,	N-terminal	domain
HTH_23	PF13384.1	gi|479325943|ref|YP_007865998.1|	-	0.016	14.8	0.1	0.016	14.8	0.1	3.2	4	0	0	4	4	4	0	Homeodomain-like	domain
HTH_37	PF13744.1	gi|479325943|ref|YP_007865998.1|	-	0.027	14.2	0.2	0.85	9.4	0.1	2.8	3	0	0	3	3	3	0	Helix-turn-helix	domain
DUF3562	PF12085.3	gi|479325943|ref|YP_007865998.1|	-	0.032	14.0	0.6	1.2	9.0	0.0	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3562)
HTH_Crp_2	PF13545.1	gi|479325943|ref|YP_007865998.1|	-	0.45	10.3	4.6	1.9	8.3	0.1	3.2	4	0	0	4	4	4	0	Crp-like	helix-turn-helix	domain
SUI1	PF01253.17	gi|479325944|ref|YP_007865999.1|	-	2.1e-24	85.1	3.0	2.4e-24	84.9	2.1	1.1	1	0	0	1	1	1	1	Translation	initiation	factor	SUI1
P-mevalo_kinase	PF04275.9	gi|479325944|ref|YP_007865999.1|	-	0.034	13.8	0.1	0.044	13.5	0.1	1.2	1	0	0	1	1	1	0	Phosphomevalonate	kinase
Img2	PF05046.9	gi|479325944|ref|YP_007865999.1|	-	0.15	12.3	1.1	0.22	11.7	0.8	1.4	1	1	0	1	1	1	0	Mitochondrial	large	subunit	ribosomal	protein	(Img2)
Arginase	PF00491.16	gi|479325945|ref|YP_007866000.1|	-	1e-70	238.1	0.0	1.2e-70	238.0	0.0	1.0	1	0	0	1	1	1	1	Arginase	family
HMGL-like	PF00682.14	gi|479325945|ref|YP_007866000.1|	-	0.053	13.1	0.0	0.16	11.5	0.0	1.8	2	0	0	2	2	2	0	HMGL-like
tRNA-synt_2b	PF00587.20	gi|479325946|ref|YP_007866001.1|	-	2.4e-49	167.2	0.3	4.8e-49	166.2	0.2	1.5	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|479325946|ref|YP_007866001.1|	-	4.4e-19	68.2	0.1	1.1e-18	66.8	0.1	1.8	1	0	0	1	1	1	1	Anticodon	binding	domain
DNA_RNApol_7kD	PF03604.8	gi|479325946|ref|YP_007866001.1|	-	0.98	8.9	4.5	0.26	10.7	0.3	2.1	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Molydop_binding	PF01568.16	gi|479325947|ref|YP_007866002.1|	-	8.8e-06	25.5	0.1	0.046	13.5	0.0	2.2	1	1	1	2	2	2	2	Molydopterin	dinucleotide	binding	domain
CDC48_N	PF02359.13	gi|479325947|ref|YP_007866002.1|	-	0.12	12.3	0.6	0.29	11.1	0.1	2.0	2	1	0	2	2	2	0	Cell	division	protein	48	(CDC48),	N-terminal	domain
HGTP_anticodon	PF03129.15	gi|479325948|ref|YP_007866003.1|	-	0.033	14.1	1.2	0.79	9.7	0.2	2.1	1	1	1	2	2	2	0	Anticodon	binding	domain
Nuc_rec_co-act	PF08815.5	gi|479325948|ref|YP_007866003.1|	-	0.11	12.0	0.2	0.29	10.6	0.2	1.7	1	0	0	1	1	1	0	Nuclear	receptor	coactivator
PhoU_div	PF01865.11	gi|479325949|ref|YP_007866004.1|	-	6.8e-06	25.3	10.8	7.1e-05	22.0	4.1	2.2	1	1	1	2	2	2	2	Protein	of	unknown	function	DUF47
Zn_protease	PF05618.6	gi|479325949|ref|YP_007866004.1|	-	0.0035	17.0	0.1	0.0061	16.2	0.0	1.4	1	0	0	1	1	1	1	Putative	ATP-dependant	zinc	protease
TSCPD	PF12637.2	gi|479325949|ref|YP_007866004.1|	-	0.0036	17.2	0.0	0.0094	15.8	0.0	1.7	1	0	0	1	1	1	1	TSCPD	domain
PhoU	PF01895.14	gi|479325949|ref|YP_007866004.1|	-	0.022	15.1	13.4	0.027	14.8	2.5	3.1	1	1	2	3	3	3	0	PhoU	domain
tRNA_int_endo	PF01974.12	gi|479325950|ref|YP_007866005.1|	-	5.1e-27	93.4	0.5	8.7e-27	92.7	0.1	1.6	2	0	0	2	2	2	1	tRNA	intron	endonuclease,	catalytic	C-terminal	domain
tRNA_int_endo_N	PF02778.9	gi|479325950|ref|YP_007866005.1|	-	8e-18	63.7	0.1	6.7e-17	60.8	0.1	2.0	2	0	0	2	2	2	1	tRNA	intron	endonuclease,	N-terminal	domain
Fer4_18	PF13746.1	gi|479325951|ref|YP_007866006.1|	-	0.34	11.3	5.6	6.6	7.2	3.9	2.1	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Flavoprotein	PF02441.14	gi|479325952|ref|YP_007866007.1|	-	7.5e-26	90.3	0.2	1.2e-25	89.6	0.1	1.3	1	0	0	1	1	1	1	Flavoprotein
CoA_binding	PF02629.14	gi|479325952|ref|YP_007866007.1|	-	0.078	13.4	0.2	0.28	11.7	0.0	1.9	2	0	0	2	2	2	0	CoA	binding	domain
Arc_trans_TRASH	PF08394.5	gi|479325953|ref|YP_007866008.1|	-	4.2e-05	23.6	4.1	6.5e-05	23.0	2.9	1.3	1	0	0	1	1	1	1	Archaeal	TRASH	domain
Corona_NS8	PF12093.3	gi|479325953|ref|YP_007866008.1|	-	0.0047	17.2	0.9	0.0052	17.1	0.6	1.1	1	0	0	1	1	1	1	Coronavirus	NS8	protein
zf-RING_2	PF13639.1	gi|479325953|ref|YP_007866008.1|	-	0.005	16.6	1.6	0.007	16.1	1.1	1.3	1	0	0	1	1	1	1	Ring	finger	domain
PyrI_C	PF02748.10	gi|479325953|ref|YP_007866008.1|	-	0.0076	15.6	0.0	0.018	14.4	0.0	1.6	1	0	0	1	1	1	1	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
zf-SNAP50_C	PF12251.3	gi|479325953|ref|YP_007866008.1|	-	0.018	14.3	1.1	0.021	14.2	0.8	1.0	1	0	0	1	1	1	0	snRNA-activating	protein	of	50kDa	MW	C	terminal
zf-RING_6	PF14835.1	gi|479325953|ref|YP_007866008.1|	-	0.036	13.8	0.5	0.045	13.5	0.4	1.2	1	0	0	1	1	1	0	zf-RING	of	BARD1-type	protein
zf-FCS	PF06467.9	gi|479325953|ref|YP_007866008.1|	-	0.045	13.4	10.3	0.085	12.5	7.1	1.6	1	1	0	1	1	1	0	MYM-type	Zinc	finger	with	FCS	sequence	motif
FANCL_C	PF11793.3	gi|479325953|ref|YP_007866008.1|	-	0.066	13.1	4.5	0.086	12.8	3.1	1.2	1	0	0	1	1	1	0	FANCL	C-terminal	domain
DUF329	PF03884.9	gi|479325953|ref|YP_007866008.1|	-	0.29	10.7	9.4	0.96	9.0	6.5	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF329)
zf-HIT	PF04438.11	gi|479325953|ref|YP_007866008.1|	-	1.5	8.5	5.5	8.3	6.1	3.8	2.0	1	1	0	1	1	1	0	HIT	zinc	finger
DUF3330	PF11809.3	gi|479325953|ref|YP_007866008.1|	-	2.8	7.8	7.6	11	5.9	5.2	2.1	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF3330)
Thi4	PF01946.12	gi|479325954|ref|YP_007866009.1|	-	3.4e-88	294.6	3.0	4e-88	294.3	2.0	1.0	1	0	0	1	1	1	1	Thi4	family
DAO	PF01266.19	gi|479325954|ref|YP_007866009.1|	-	1.7e-15	56.8	3.7	1.1e-09	37.7	0.4	2.1	1	1	1	2	2	2	2	FAD	dependent	oxidoreductase
FAD_oxidored	PF12831.2	gi|479325954|ref|YP_007866009.1|	-	1.2e-10	41.0	2.5	1.6e-10	40.6	1.8	1.1	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|479325954|ref|YP_007866009.1|	-	3.4e-10	39.3	8.1	1.5e-06	27.3	0.9	3.0	3	0	0	3	3	3	3	FAD	binding	domain
NAD_binding_8	PF13450.1	gi|479325954|ref|YP_007866009.1|	-	4.4e-10	39.4	0.9	1.1e-09	38.1	0.5	1.8	2	0	0	2	2	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_3	PF01494.14	gi|479325954|ref|YP_007866009.1|	-	8.6e-07	28.3	0.0	1.4e-06	27.6	0.0	1.3	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox_3	PF13738.1	gi|479325954|ref|YP_007866009.1|	-	9.5e-07	29.0	0.4	3.5e-06	27.2	0.2	1.8	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.9	gi|479325954|ref|YP_007866009.1|	-	1.1e-06	28.7	1.3	1.6e-06	28.1	0.9	1.5	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|479325954|ref|YP_007866009.1|	-	1e-05	24.2	0.2	1.3e-05	23.8	0.2	1.3	1	0	0	1	1	1	1	HI0933-like	protein
GIDA	PF01134.17	gi|479325954|ref|YP_007866009.1|	-	3.4e-05	22.8	0.6	7.5e-05	21.7	0.4	1.5	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
Pyr_redox	PF00070.22	gi|479325954|ref|YP_007866009.1|	-	0.00022	21.5	1.0	0.0012	19.1	0.4	2.5	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Amino_oxidase	PF01593.19	gi|479325954|ref|YP_007866009.1|	-	0.00061	18.9	0.1	0.00093	18.3	0.1	1.2	1	0	0	1	1	1	1	Flavin	containing	amine	oxidoreductase
Lycopene_cycl	PF05834.7	gi|479325954|ref|YP_007866009.1|	-	0.0011	18.0	0.4	0.0034	16.3	0.2	1.8	1	1	0	1	1	1	1	Lycopene	cyclase	protein
ThiF	PF00899.16	gi|479325954|ref|YP_007866009.1|	-	0.0081	15.9	0.8	0.025	14.4	0.0	2.1	2	1	0	2	2	2	1	ThiF	family
NAD_binding_9	PF13454.1	gi|479325954|ref|YP_007866009.1|	-	0.013	15.2	0.5	0.051	13.3	0.1	2.2	2	1	0	2	2	2	0	FAD-NAD(P)-binding
K_oxygenase	PF13434.1	gi|479325954|ref|YP_007866009.1|	-	0.02	13.8	0.0	0.037	12.9	0.0	1.3	1	0	0	1	1	1	0	L-lysine	6-monooxygenase	(NADPH-requiring)
Trp_halogenase	PF04820.9	gi|479325954|ref|YP_007866009.1|	-	0.065	11.8	3.2	0.33	9.5	0.5	2.2	2	1	0	2	2	2	0	Tryptophan	halogenase
Shikimate_DH	PF01488.15	gi|479325954|ref|YP_007866009.1|	-	0.071	13.2	0.0	0.27	11.3	0.0	2.0	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
GMC_oxred_N	PF00732.14	gi|479325954|ref|YP_007866009.1|	-	0.12	11.5	0.0	0.21	10.6	0.0	1.3	1	0	0	1	1	1	0	GMC	oxidoreductase
CoA_binding	PF02629.14	gi|479325954|ref|YP_007866009.1|	-	1.3	9.6	4.4	10	6.7	0.5	3.0	2	1	0	2	2	2	0	CoA	binding	domain
Ribosomal_S24e	PF01282.14	gi|479325955|ref|YP_007866010.1|	-	2e-17	62.7	0.1	2.7e-17	62.3	0.1	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S24e
Flag1_repress	PF03614.8	gi|479325955|ref|YP_007866010.1|	-	0.092	12.2	0.0	0.1	12.1	0.0	1.2	1	0	0	1	1	1	0	Repressor	of	phase-1	flagellin
Ribosomal_S27	PF01599.14	gi|479325956|ref|YP_007866011.1|	-	1.4e-10	40.8	1.8	1.4e-10	40.8	1.2	1.9	2	0	0	2	2	2	1	Ribosomal	protein	S27a
Zn_Tnp_IS1595	PF12760.2	gi|479325956|ref|YP_007866011.1|	-	6.7e-05	22.6	2.2	8.7e-05	22.2	1.5	1.3	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|479325956|ref|YP_007866011.1|	-	0.00057	19.4	2.6	0.00072	19.1	1.8	1.3	1	1	0	1	1	1	1	Putative	transposase	DNA-binding	domain
FAM72	PF14976.1	gi|479325956|ref|YP_007866011.1|	-	0.0029	17.4	0.3	0.0034	17.2	0.2	1.1	1	0	0	1	1	1	1	FAM72	protein
DZR	PF12773.2	gi|479325956|ref|YP_007866011.1|	-	0.0063	16.3	0.7	0.011	15.5	0.5	1.4	1	0	0	1	1	1	1	Double	zinc	ribbon
RNA_POL_M_15KD	PF02150.11	gi|479325956|ref|YP_007866011.1|	-	0.011	15.4	0.3	0.028	14.1	0.2	1.8	1	1	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
GFA	PF04828.9	gi|479325956|ref|YP_007866011.1|	-	0.016	15.1	2.4	0.18	11.7	0.1	2.0	1	1	1	2	2	2	0	Glutathione-dependent	formaldehyde-activating	enzyme
FlhC	PF05280.6	gi|479325956|ref|YP_007866011.1|	-	0.027	13.9	0.1	0.029	13.8	0.1	1.1	1	0	0	1	1	1	0	Flagellar	transcriptional	activator	(FlhC)
UPF0179	PF03684.8	gi|479325956|ref|YP_007866011.1|	-	0.028	13.9	0.3	0.03	13.9	0.2	1.1	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0179)
SprT-like	PF10263.4	gi|479325956|ref|YP_007866011.1|	-	0.032	13.8	0.7	0.032	13.8	0.5	1.1	1	0	0	1	1	1	0	SprT-like	family
zf-ribbon_3	PF13248.1	gi|479325956|ref|YP_007866011.1|	-	0.035	13.3	3.3	0.37	10.0	0.1	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|479325956|ref|YP_007866011.1|	-	0.061	12.8	4.6	0.43	10.1	0.4	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-tcix	PF14952.1	gi|479325956|ref|YP_007866011.1|	-	0.071	12.4	3.9	0.085	12.2	0.2	2.2	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
DUF2082	PF09855.4	gi|479325956|ref|YP_007866011.1|	-	0.075	12.8	3.9	0.22	11.4	0.3	2.2	1	1	1	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
DUF2387	PF09526.5	gi|479325956|ref|YP_007866011.1|	-	0.081	12.8	2.1	0.13	12.2	0.2	1.9	2	0	0	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
Ribosomal_L37e	PF01907.14	gi|479325956|ref|YP_007866011.1|	-	0.098	12.4	2.6	0.16	11.8	1.8	1.4	1	0	0	1	1	1	0	Ribosomal	protein	L37e
Nudix_N_2	PF14803.1	gi|479325956|ref|YP_007866011.1|	-	0.1	12.2	2.1	0.28	10.8	1.4	1.7	1	1	0	1	1	1	0	Nudix	N-terminal
Zn-ribbon_8	PF09723.5	gi|479325956|ref|YP_007866011.1|	-	0.15	12.0	1.1	2.3	8.2	0.1	2.2	2	0	0	2	2	2	0	Zinc	ribbon	domain
A2L_zn_ribbon	PF08792.5	gi|479325956|ref|YP_007866011.1|	-	0.16	11.4	1.0	3.5	7.1	0.1	2.2	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
UPF0547	PF10571.4	gi|479325956|ref|YP_007866011.1|	-	0.2	11.3	0.2	0.2	11.3	0.1	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
DNA_RNApol_7kD	PF03604.8	gi|479325956|ref|YP_007866011.1|	-	0.27	10.7	3.8	1.3	8.5	1.9	2.2	1	1	1	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
TFIIS_C	PF01096.13	gi|479325956|ref|YP_007866011.1|	-	0.28	10.8	1.6	6.8	6.4	0.2	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
YhfH	PF14149.1	gi|479325956|ref|YP_007866011.1|	-	0.28	10.9	0.4	0.28	10.9	0.3	2.1	2	0	0	2	2	2	0	YhfH-like	protein
ADK_lid	PF05191.9	gi|479325956|ref|YP_007866011.1|	-	0.37	10.4	2.2	6.5	6.5	0.3	2.2	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
zf-ISL3	PF14690.1	gi|479325956|ref|YP_007866011.1|	-	0.42	10.6	6.7	1	9.4	0.4	2.7	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-RanBP	PF00641.13	gi|479325956|ref|YP_007866011.1|	-	0.8	8.8	4.5	2.7	7.1	0.4	2.2	2	0	0	2	2	2	0	Zn-finger	in	Ran	binding	protein	and	others
zf-NADH-PPase	PF09297.6	gi|479325956|ref|YP_007866011.1|	-	0.96	9.0	4.6	3.3	7.3	0.1	2.2	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
Auto_anti-p27	PF06677.7	gi|479325956|ref|YP_007866011.1|	-	1	9.1	5.0	4.3	7.1	3.7	1.8	1	1	1	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
TF_Zn_Ribbon	PF08271.7	gi|479325956|ref|YP_007866011.1|	-	3.7	6.9	5.6	27	4.2	3.9	2.1	1	1	0	1	1	1	0	TFIIB	zinc-binding
Rubredoxin	PF00301.15	gi|479325956|ref|YP_007866011.1|	-	5.7	6.8	6.4	9.6	6.1	0.4	2.4	1	1	1	2	2	2	0	Rubredoxin
Peptidase_M22	PF00814.20	gi|479325957|ref|YP_007866012.1|	-	1.4e-73	247.7	0.0	1.7e-73	247.4	0.0	1.0	1	0	0	1	1	1	1	Glycoprotease	family
CmcH_NodU	PF02543.10	gi|479325957|ref|YP_007866012.1|	-	0.0016	17.6	0.0	0.0021	17.2	0.0	1.1	1	0	0	1	1	1	1	Carbamoyltransferase
CheX	PF13690.1	gi|479325957|ref|YP_007866012.1|	-	0.023	14.5	0.0	0.25	11.2	0.0	2.4	2	1	0	2	2	2	0	Chemotaxis	phosphatase	CheX
Pkinase	PF00069.20	gi|479325958|ref|YP_007866013.1|	-	3.4e-10	39.5	0.2	4.5e-10	39.1	0.1	1.1	1	0	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|479325958|ref|YP_007866013.1|	-	2.8e-07	29.8	0.0	3.4e-07	29.6	0.0	1.1	1	0	0	1	1	1	1	Protein	tyrosine	kinase
APH	PF01636.18	gi|479325958|ref|YP_007866013.1|	-	4.3e-07	29.9	0.0	0.01	15.5	0.0	2.1	1	1	1	2	2	2	2	Phosphotransferase	enzyme	family
Kdo	PF06293.9	gi|479325958|ref|YP_007866013.1|	-	4.7e-07	29.0	0.0	6.7e-07	28.5	0.0	1.3	1	1	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
RIO1	PF01163.17	gi|479325958|ref|YP_007866013.1|	-	3.6e-06	26.4	0.0	5e-06	25.9	0.0	1.2	1	0	0	1	1	1	1	RIO1	family
WaaY	PF06176.6	gi|479325958|ref|YP_007866013.1|	-	1e-05	24.8	1.3	1.3e-05	24.5	0.9	1.3	1	0	0	1	1	1	1	Lipopolysaccharide	core	biosynthesis	protein	(WaaY)
Choline_kinase	PF01633.15	gi|479325958|ref|YP_007866013.1|	-	0.00017	21.2	0.1	0.00035	20.2	0.0	1.4	1	1	0	1	1	1	1	Choline/ethanolamine	kinase
EcKinase	PF02958.15	gi|479325958|ref|YP_007866013.1|	-	0.0092	15.1	0.0	0.013	14.6	0.0	1.3	1	0	0	1	1	1	1	Ecdysteroid	kinase
Ham1p_like	PF01725.11	gi|479325959|ref|YP_007866014.1|	-	4.3e-50	169.7	0.1	4.8e-50	169.5	0.0	1.0	1	0	0	1	1	1	1	Ham1	family
DUF903	PF06004.7	gi|479325959|ref|YP_007866014.1|	-	0.074	12.5	0.9	1.3	8.5	0.1	2.2	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF903)
Aldo_ket_red	PF00248.16	gi|479325960|ref|YP_007866015.1|	-	1.4e-44	152.0	0.1	1.9e-44	151.6	0.1	1.2	1	0	0	1	1	1	1	Aldo/keto	reductase	family
PCEMA1	PF07418.6	gi|479325961|ref|YP_007866016.1|	-	0.1	11.9	1.8	0.13	11.6	1.2	1.0	1	0	0	1	1	1	0	Acidic	phosphoprotein	precursor	PCEMA1
vATP-synt_AC39	PF01992.11	gi|479325962|ref|YP_007866017.1|	-	2.5e-05	23.5	7.9	6.7e-05	22.1	5.5	1.8	1	1	0	1	1	1	1	ATP	synthase	(C/AC39)	subunit
Phage_GP20	PF06810.6	gi|479325962|ref|YP_007866017.1|	-	0.019	14.3	0.1	0.94	8.9	0.0	2.3	2	0	0	2	2	2	0	Phage	minor	structural	protein	GP20
LAGLIDADG_1	PF00961.14	gi|479325962|ref|YP_007866017.1|	-	1.3	9.6	9.6	0.12	12.8	1.9	2.7	1	1	1	2	2	2	0	LAGLIDADG	endonuclease
Muted	PF14942.1	gi|479325963|ref|YP_007866018.1|	-	0.0023	17.7	5.2	0.003	17.4	3.6	1.1	1	0	0	1	1	1	1	Organelle	biogenesis,	Muted-like	protein
Sec15	PF04091.7	gi|479325963|ref|YP_007866018.1|	-	0.003	16.9	2.3	0.0032	16.8	0.6	1.6	1	1	1	2	2	2	1	Exocyst	complex	subunit	Sec15-like
CHASE3	PF05227.8	gi|479325963|ref|YP_007866018.1|	-	0.019	14.6	4.2	0.028	14.0	2.9	1.3	1	0	0	1	1	1	0	CHASE3	domain
DUF3435	PF11917.3	gi|479325963|ref|YP_007866018.1|	-	0.027	13.2	3.9	0.032	12.9	2.7	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3435)
Apolipoprotein	PF01442.13	gi|479325963|ref|YP_007866018.1|	-	0.048	13.1	5.3	0.068	12.6	3.7	1.2	1	0	0	1	1	1	0	Apolipoprotein	A1/A4/E	domain
HrpE	PF06188.7	gi|479325963|ref|YP_007866018.1|	-	0.051	13.3	0.8	0.06	13.0	0.6	1.1	1	0	0	1	1	1	0	HrpE/YscL/FliH	and	V-type	ATPase	subunit	E
DUF3552	PF12072.3	gi|479325963|ref|YP_007866018.1|	-	0.06	12.5	13.8	0.16	11.1	9.6	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF3552)
V-ATPase_G	PF03179.10	gi|479325963|ref|YP_007866018.1|	-	0.087	13.1	9.4	1.3	9.3	6.5	2.2	1	1	0	1	1	1	0	Vacuolar	(H+)-ATPase	G	subunit
RHH_1	PF01402.16	gi|479325963|ref|YP_007866018.1|	-	0.093	12.6	3.4	3.6	7.6	0.1	3.4	2	1	1	3	3	3	0	Ribbon-helix-helix	protein,	copG	family
Ribosomal_L22	PF00237.14	gi|479325963|ref|YP_007866018.1|	-	0.13	12.2	0.7	0.47	10.4	0.1	1.9	1	1	1	2	2	2	0	Ribosomal	protein	L22p/L17e
Exonuc_VII_L	PF02601.10	gi|479325963|ref|YP_007866018.1|	-	0.13	11.4	3.9	0.14	11.3	2.7	1.0	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
DUF2624	PF11116.3	gi|479325963|ref|YP_007866018.1|	-	0.14	12.6	3.2	0.37	11.3	1.6	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2624)
KorB	PF08535.5	gi|479325963|ref|YP_007866018.1|	-	0.15	12.1	2.2	0.24	11.5	0.9	1.9	1	1	1	2	2	2	0	KorB	domain
DUF883	PF05957.8	gi|479325963|ref|YP_007866018.1|	-	0.16	12.4	7.0	1.5	9.2	1.0	2.2	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF883)
Peptidase_S46	PF10459.4	gi|479325963|ref|YP_007866018.1|	-	0.19	10.0	4.7	0.22	9.8	3.3	1.0	1	0	0	1	1	1	0	Peptidase	S46
ISG65-75	PF11727.3	gi|479325963|ref|YP_007866018.1|	-	0.2	10.6	5.1	0.24	10.4	3.6	1.0	1	0	0	1	1	1	0	Invariant	surface	glycoprotein
OmpH	PF03938.9	gi|479325963|ref|YP_007866018.1|	-	0.25	11.2	6.0	0.32	10.9	4.1	1.1	1	0	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
DUF2265	PF10023.4	gi|479325963|ref|YP_007866018.1|	-	0.26	10.3	2.0	0.28	10.2	1.4	1.1	1	0	0	1	1	1	0	Predicted	aminopeptidase	(DUF2265)
Prominin	PF05478.6	gi|479325963|ref|YP_007866018.1|	-	0.27	8.7	4.1	0.69	7.3	2.7	1.5	1	1	0	1	1	1	0	Prominin
RGS	PF00615.14	gi|479325963|ref|YP_007866018.1|	-	0.31	11.1	2.5	0.65	10.1	1.7	1.6	1	1	0	1	1	1	0	Regulator	of	G	protein	signaling	domain
DUF445	PF04286.7	gi|479325963|ref|YP_007866018.1|	-	0.32	10.4	5.2	0.37	10.2	3.6	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF445)
Spore_III_AB	PF09548.5	gi|479325963|ref|YP_007866018.1|	-	0.38	10.4	4.2	0.53	10.0	2.9	1.3	1	1	0	1	1	1	0	Stage	III	sporulation	protein	AB	(spore_III_AB)
Peptidase_U57	PF05582.7	gi|479325963|ref|YP_007866018.1|	-	0.39	9.6	4.3	0.43	9.4	3.0	1.1	1	0	0	1	1	1	0	YabG	peptidase	U57
Ribosomal_L29	PF00831.18	gi|479325963|ref|YP_007866018.1|	-	0.39	10.4	15.9	0.16	11.7	0.6	3.3	2	1	1	3	3	3	0	Ribosomal	L29	protein
DUF885	PF05960.6	gi|479325963|ref|YP_007866018.1|	-	0.44	9.6	2.9	0.49	9.4	2.0	1.0	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF885)
PNPase	PF03726.9	gi|479325963|ref|YP_007866018.1|	-	0.44	10.8	8.5	0.11	12.8	3.4	1.7	2	0	0	2	2	2	0	Polyribonucleotide	nucleotidyltransferase,	RNA	binding	domain
P4Ha_N	PF08336.6	gi|479325963|ref|YP_007866018.1|	-	0.59	9.9	6.2	0.43	10.3	2.6	1.8	1	1	0	1	1	1	0	Prolyl	4-Hydroxylase	alpha-subunit,	N-terminal	region
ATP-synt_B	PF00430.13	gi|479325963|ref|YP_007866018.1|	-	0.59	9.9	10.9	0.2	11.4	5.2	1.8	1	1	1	2	2	2	0	ATP	synthase	B/B'	CF(0)
DUF3829	PF12889.2	gi|479325963|ref|YP_007866018.1|	-	0.63	9.1	9.0	1.5	7.9	6.2	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3829)
HBS1_N	PF08938.5	gi|479325963|ref|YP_007866018.1|	-	0.67	10.1	4.3	1	9.5	2.5	1.7	1	1	1	2	2	2	0	HBS1	N-terminus
CorA	PF01544.13	gi|479325963|ref|YP_007866018.1|	-	0.82	8.6	8.4	1	8.3	5.8	1.1	1	0	0	1	1	1	0	CorA-like	Mg2+	transporter	protein
AbiH	PF14253.1	gi|479325963|ref|YP_007866018.1|	-	0.84	9.1	6.7	1	8.9	4.6	1.0	1	0	0	1	1	1	0	Bacteriophage	abortive	infection	AbiH
MADF_DNA_bdg	PF10545.4	gi|479325963|ref|YP_007866018.1|	-	0.98	9.6	3.7	3.9	7.7	2.6	2.0	1	1	0	1	1	1	0	Alcohol	dehydrogenase	transcription	factor	Myb/SANT-like
M11L	PF11099.3	gi|479325963|ref|YP_007866018.1|	-	1	9.0	5.3	0.52	10.0	1.3	1.8	1	1	1	2	2	2	0	Apoptosis	regulator	M11L	like
DUF3818	PF12825.2	gi|479325963|ref|YP_007866018.1|	-	1.4	7.5	6.4	1.1	7.8	3.5	1.5	1	1	1	2	2	2	0	Domain	of	unknown	function	in	PX-proteins	(DUF3818)
Methyltransf_14	PF08484.6	gi|479325963|ref|YP_007866018.1|	-	2.1	7.8	5.2	1	8.8	1.6	1.8	2	0	0	2	2	2	0	C-methyltransferase	C-terminal	domain
Mitofilin	PF09731.4	gi|479325963|ref|YP_007866018.1|	-	2.7	6.5	12.9	3.2	6.2	8.9	1.0	1	0	0	1	1	1	0	Mitochondrial	inner	membrane	protein
PhoU	PF01895.14	gi|479325963|ref|YP_007866018.1|	-	2.8	8.4	13.3	3	8.3	3.8	2.1	1	1	1	2	2	2	0	PhoU	domain
CarD_CdnL_TRCF	PF02559.11	gi|479325963|ref|YP_007866018.1|	-	3	7.9	5.4	8.8	6.4	3.7	1.7	1	1	1	2	2	2	0	CarD-like/TRCF	domain
Spore_GerAC	PF05504.6	gi|479325963|ref|YP_007866018.1|	-	3.1	7.5	10.2	0.95	9.2	2.3	2.3	1	1	1	2	2	2	0	Spore	germination	B3/	GerAC	like,	C-terminal
Ribosomal_L6e	PF01159.14	gi|479325963|ref|YP_007866018.1|	-	3.2	8.0	6.4	2.5	8.3	3.4	1.5	1	1	1	2	2	2	0	Ribosomal	protein	L6e
HK97-gp10_like	PF04883.7	gi|479325963|ref|YP_007866018.1|	-	4.7	8.2	6.0	8.3	7.4	0.4	2.7	1	1	1	2	2	2	0	Bacteriophage	HK97-gp10,	putative	tail-component
Synaptobrevin	PF00957.16	gi|479325963|ref|YP_007866018.1|	-	5.2	6.7	5.8	3.8	7.1	0.5	2.5	1	1	2	3	3	3	0	Synaptobrevin
HSCB_C	PF07743.8	gi|479325963|ref|YP_007866018.1|	-	8.6	6.9	10.8	5.2	7.6	0.8	2.6	1	1	3	4	4	4	0	HSCB	C-terminal	oligomerisation	domain
GCD14	PF08704.5	gi|479325964|ref|YP_007866019.1|	-	2.8e-32	112.1	0.0	3.9e-32	111.7	0.0	1.0	1	0	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
Methyltransf_31	PF13847.1	gi|479325964|ref|YP_007866019.1|	-	6.2e-11	42.1	0.1	8.1e-11	41.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|479325964|ref|YP_007866019.1|	-	3.2e-08	34.1	0.0	5.6e-08	33.3	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_3	PF01596.12	gi|479325964|ref|YP_007866019.1|	-	4.5e-08	32.3	0.2	9.9e-08	31.2	0.0	1.6	2	0	0	2	2	2	1	O-methyltransferase
MTS	PF05175.9	gi|479325964|ref|YP_007866019.1|	-	1.1e-06	28.1	0.0	1.5e-06	27.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
PCMT	PF01135.14	gi|479325964|ref|YP_007866019.1|	-	1.2e-06	28.2	0.0	1.7e-06	27.7	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_26	PF13659.1	gi|479325964|ref|YP_007866019.1|	-	3.9e-06	26.8	0.0	6.2e-06	26.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|479325964|ref|YP_007866019.1|	-	9.7e-06	24.9	0.5	1.7e-05	24.1	0.3	1.5	1	1	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
UPF0020	PF01170.13	gi|479325964|ref|YP_007866019.1|	-	0.00012	21.7	0.0	0.00018	21.1	0.0	1.3	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_32	PF13679.1	gi|479325964|ref|YP_007866019.1|	-	0.00016	21.3	0.0	0.00022	20.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_16	PF10294.4	gi|479325964|ref|YP_007866019.1|	-	0.00061	19.2	0.1	0.0011	18.4	0.0	1.5	1	1	0	1	1	1	1	Putative	methyltransferase
Methyltransf_15	PF09445.5	gi|479325964|ref|YP_007866019.1|	-	0.0035	16.9	0.0	0.0058	16.1	0.0	1.4	1	1	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_24	PF13578.1	gi|479325964|ref|YP_007866019.1|	-	0.0054	17.5	0.0	0.013	16.3	0.0	1.6	2	0	0	2	2	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|479325964|ref|YP_007866019.1|	-	0.0094	14.9	0.0	0.014	14.4	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Ubie_methyltran	PF01209.13	gi|479325964|ref|YP_007866019.1|	-	0.026	13.6	0.0	0.033	13.2	0.0	1.3	1	0	0	1	1	1	0	ubiE/COQ5	methyltransferase	family
Methyltransf_23	PF13489.1	gi|479325964|ref|YP_007866019.1|	-	0.046	13.4	0.0	0.12	12.0	0.0	1.7	1	1	0	1	1	1	0	Methyltransferase	domain
TH1	PF04858.8	gi|479325964|ref|YP_007866019.1|	-	0.088	10.9	0.0	0.12	10.4	0.0	1.1	1	0	0	1	1	1	0	TH1	protein
Methyltransf_25	PF13649.1	gi|479325964|ref|YP_007866019.1|	-	0.11	12.8	0.0	0.18	12.1	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
FmrO	PF07091.6	gi|479325964|ref|YP_007866019.1|	-	0.15	11.0	0.0	0.21	10.5	0.0	1.1	1	0	0	1	1	1	0	Ribosomal	RNA	methyltransferase	(FmrO)
RHH_2	PF03693.9	gi|479325965|ref|YP_007866020.1|	-	7e-08	32.5	0.0	7.5e-08	32.4	0.0	1.1	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0156)
RHH_1	PF01402.16	gi|479325965|ref|YP_007866020.1|	-	3.6e-07	29.8	0.0	4.2e-07	29.5	0.0	1.1	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
TrmB	PF01978.14	gi|479325966|ref|YP_007866021.1|	-	1.1e-21	76.3	0.3	2.7e-21	75.0	0.2	1.6	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
Penicillinase_R	PF03965.11	gi|479325966|ref|YP_007866021.1|	-	0.0007	19.6	0.1	0.0015	18.5	0.0	1.6	2	0	0	2	2	2	1	Penicillinase	repressor
HTH_9	PF08221.6	gi|479325966|ref|YP_007866021.1|	-	0.0015	18.3	0.0	0.0042	16.9	0.0	1.7	1	0	0	1	1	1	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
HTH_24	PF13412.1	gi|479325966|ref|YP_007866021.1|	-	0.0019	17.5	0.0	0.0048	16.2	0.0	1.8	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_IclR	PF09339.5	gi|479325966|ref|YP_007866021.1|	-	0.011	15.3	0.0	0.024	14.2	0.0	1.5	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
DUF4065	PF13274.1	gi|479325966|ref|YP_007866021.1|	-	0.096	13.3	0.1	0.22	12.2	0.1	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4065)
DUF2250	PF10007.4	gi|479325966|ref|YP_007866021.1|	-	0.12	12.3	0.1	0.44	10.4	0.0	1.9	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
PadR	PF03551.9	gi|479325966|ref|YP_007866021.1|	-	0.12	12.1	0.0	0.23	11.2	0.0	1.5	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
FeoC	PF09012.5	gi|479325966|ref|YP_007866021.1|	-	0.16	11.7	0.0	0.29	10.8	0.0	1.4	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
MarR_2	PF12802.2	gi|479325966|ref|YP_007866021.1|	-	0.16	11.6	0.0	0.32	10.6	0.0	1.5	1	1	0	1	1	1	0	MarR	family
Ribosomal_S25	PF03297.10	gi|479325967|ref|YP_007866022.1|	-	1.6e-11	44.1	8.6	1.8e-11	43.9	6.0	1.0	1	0	0	1	1	1	1	S25	ribosomal	protein
HTH_24	PF13412.1	gi|479325967|ref|YP_007866022.1|	-	5.2e-06	25.7	1.7	5.5e-06	25.6	0.3	1.7	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_Crp_2	PF13545.1	gi|479325967|ref|YP_007866022.1|	-	0.00021	21.0	0.3	0.25	11.1	0.1	2.2	1	1	1	2	2	2	2	Crp-like	helix-turn-helix	domain
TFIIF_alpha	PF05793.7	gi|479325967|ref|YP_007866022.1|	-	0.0027	16.1	3.4	0.0027	16.1	2.4	1.1	1	0	0	1	1	1	1	Transcription	initiation	factor	IIF,	alpha	subunit	(TFIIF-alpha)
TFIIE_alpha	PF02002.12	gi|479325967|ref|YP_007866022.1|	-	0.0044	16.4	0.6	0.0044	16.4	0.4	1.7	2	0	0	2	2	2	1	TFIIE	alpha	subunit
MarR	PF01047.17	gi|479325967|ref|YP_007866022.1|	-	0.0078	15.9	0.1	0.013	15.2	0.1	1.4	1	0	0	1	1	1	1	MarR	family
Rrf2	PF02082.15	gi|479325967|ref|YP_007866022.1|	-	0.0092	16.0	0.9	0.058	13.5	0.2	2.0	1	1	1	2	2	2	1	Transcriptional	regulator
HTH_11	PF08279.7	gi|479325967|ref|YP_007866022.1|	-	0.011	15.3	1.8	0.011	15.3	0.5	1.6	2	0	0	2	2	2	0	HTH	domain
TrmB	PF01978.14	gi|479325967|ref|YP_007866022.1|	-	0.033	13.8	1.2	0.059	13.0	0.5	1.8	1	1	1	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
Galactosyl_T	PF01762.16	gi|479325967|ref|YP_007866022.1|	-	0.073	12.6	0.1	0.09	12.3	0.1	1.1	1	0	0	1	1	1	0	Galactosyltransferase
EAP30	PF04157.11	gi|479325967|ref|YP_007866022.1|	-	0.075	12.1	0.1	0.075	12.1	0.1	1.8	1	1	1	2	2	2	0	EAP30/Vps36	family
RepL	PF05732.6	gi|479325967|ref|YP_007866022.1|	-	0.14	11.3	0.1	0.14	11.3	0.1	1.8	1	1	1	2	2	2	0	Firmicute	plasmid	replication	protein	(RepL)
IF-2B	PF01008.12	gi|479325967|ref|YP_007866022.1|	-	0.16	10.8	2.0	0.18	10.7	1.4	1.0	1	0	0	1	1	1	0	Initiation	factor	2	subunit	family
tRNA-Thr_ED	PF08915.6	gi|479325967|ref|YP_007866022.1|	-	0.33	10.9	2.2	0.86	9.5	1.5	1.8	1	1	0	1	1	1	0	Archaea-specific	editing	domain	of	threonyl-tRNA	synthetase
CN_hydrolase	PF00795.17	gi|479325968|ref|YP_007866023.1|	-	9.6e-14	51.1	0.0	1.6e-13	50.4	0.0	1.4	1	1	0	1	1	1	1	Carbon-nitrogen	hydrolase
Dmrt1	PF12374.3	gi|479325968|ref|YP_007866023.1|	-	0.013	15.7	0.1	0.024	14.9	0.0	1.3	1	0	0	1	1	1	0	Double-sex	mab3	related	transcription	factor	1
Pox_A32	PF04665.7	gi|479325968|ref|YP_007866023.1|	-	0.11	11.7	0.1	4.7	6.4	0.0	2.2	2	0	0	2	2	2	0	Poxvirus	A32	protein
TMP-TENI	PF02581.12	gi|479325968|ref|YP_007866023.1|	-	0.12	11.4	0.1	0.34	10.0	0.1	1.7	1	0	0	1	1	1	0	Thiamine	monophosphate	synthase/TENI
Topoisom_bac	PF01131.15	gi|479325969|ref|YP_007866024.1|	-	8e-87	291.6	6.7	1.4e-86	290.9	4.6	1.4	1	0	0	1	1	1	1	DNA	topoisomerase
Toprim	PF01751.17	gi|479325969|ref|YP_007866024.1|	-	5.7e-24	83.9	0.0	5.7e-24	83.9	0.0	3.0	4	0	0	4	4	4	1	Toprim	domain
DEAD	PF00270.24	gi|479325969|ref|YP_007866024.1|	-	7.6e-15	54.8	0.2	9.7e-14	51.2	0.0	2.7	3	0	0	3	3	3	1	DEAD/DEAH	box	helicase
ResIII	PF04851.10	gi|479325969|ref|YP_007866024.1|	-	0.00019	21.2	0.3	0.00019	21.2	0.2	2.1	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.26	gi|479325969|ref|YP_007866024.1|	-	0.0054	16.5	0.0	7.6	6.4	0.0	3.6	3	0	0	3	3	3	1	Helicase	conserved	C-terminal	domain
zf-C4_Topoisom	PF01396.14	gi|479325969|ref|YP_007866024.1|	-	0.0073	15.7	1.1	1.9	8.0	0.1	2.7	2	0	0	2	2	2	2	Topoisomerase	DNA	binding	C4	zinc	finger
AAA_25	PF13481.1	gi|479325969|ref|YP_007866024.1|	-	0.022	14.1	0.0	0.06	12.7	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
zf-ribbon_3	PF13248.1	gi|479325969|ref|YP_007866024.1|	-	0.074	12.2	6.7	2.8	7.2	1.5	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|479325969|ref|YP_007866024.1|	-	0.15	11.7	1.6	13	5.5	0.2	2.5	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
DNA_ligase_ZBD	PF03119.11	gi|479325969|ref|YP_007866024.1|	-	0.95	9.2	4.5	0.38	10.4	0.1	2.3	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zinc_ribbon_2	PF13240.1	gi|479325969|ref|YP_007866024.1|	-	3.5	7.2	5.5	23	4.6	0.0	2.6	2	0	0	2	2	2	0	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|479325969|ref|YP_007866024.1|	-	3.8	6.9	6.2	6.6	6.1	0.1	2.7	2	0	0	2	2	2	0	TFIIB	zinc-binding
AAA	PF00004.24	gi|479325970|ref|YP_007866025.1|	-	4.6e-101	334.2	0.0	4e-49	166.1	0.0	2.5	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
CDC48_N	PF02359.13	gi|479325970|ref|YP_007866025.1|	-	1.5e-22	79.3	0.3	6.9e-22	77.2	0.4	2.1	2	0	0	2	2	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
RuvB_N	PF05496.7	gi|479325970|ref|YP_007866025.1|	-	1e-16	60.6	0.1	4.5e-09	35.6	0.0	2.8	2	1	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_2	PF07724.9	gi|479325970|ref|YP_007866025.1|	-	1.1e-15	57.9	0.0	1e-07	32.0	0.0	2.6	2	0	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
CDC48_2	PF02933.12	gi|479325970|ref|YP_007866025.1|	-	2.4e-15	55.8	0.1	1.4e-12	47.0	0.1	2.8	2	0	0	2	2	2	1	Cell	division	protein	48	(CDC48),	domain	2
AAA_22	PF13401.1	gi|479325970|ref|YP_007866025.1|	-	3.2e-14	53.1	0.3	4.6e-05	23.5	0.0	4.7	2	2	1	3	3	3	2	AAA	domain
AAA_16	PF13191.1	gi|479325970|ref|YP_007866025.1|	-	3.5e-14	53.2	0.2	3.3e-07	30.4	0.0	3.7	3	1	1	4	4	4	2	AAA	ATPase	domain
AAA_17	PF13207.1	gi|479325970|ref|YP_007866025.1|	-	2e-12	47.9	0.2	4.5e-06	27.4	0.0	3.3	3	1	0	3	3	2	2	AAA	domain
AAA_5	PF07728.9	gi|479325970|ref|YP_007866025.1|	-	3.6e-12	46.1	1.9	0.00011	21.9	0.0	4.3	3	2	0	3	3	2	2	AAA	domain	(dynein-related	subfamily)
TIP49	PF06068.8	gi|479325970|ref|YP_007866025.1|	-	1.5e-11	43.6	0.1	0.00012	20.8	0.0	3.1	3	0	0	3	3	3	2	TIP49	C-terminus
AAA_33	PF13671.1	gi|479325970|ref|YP_007866025.1|	-	2.8e-11	43.4	0.0	0.00028	20.7	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
AAA_14	PF13173.1	gi|479325970|ref|YP_007866025.1|	-	4.5e-11	42.7	0.0	2.5e-05	24.1	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
IstB_IS21	PF01695.12	gi|479325970|ref|YP_007866025.1|	-	2.9e-09	36.5	0.8	0.0025	17.2	0.1	2.6	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
Zeta_toxin	PF06414.7	gi|479325970|ref|YP_007866025.1|	-	3.9e-09	35.8	0.0	0.0015	17.7	0.0	2.5	2	0	0	2	2	2	2	Zeta	toxin
AAA_18	PF13238.1	gi|479325970|ref|YP_007866025.1|	-	1.1e-08	35.4	0.1	0.0014	18.9	0.0	3.0	2	0	0	2	2	2	2	AAA	domain
Arch_ATPase	PF01637.13	gi|479325970|ref|YP_007866025.1|	-	2.9e-08	33.6	0.1	0.0027	17.4	0.0	4.1	3	1	1	4	4	3	1	Archaeal	ATPase
AAA_28	PF13521.1	gi|479325970|ref|YP_007866025.1|	-	3.4e-08	33.6	0.0	0.0096	15.8	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
AAA_25	PF13481.1	gi|479325970|ref|YP_007866025.1|	-	8.5e-08	31.8	4.2	0.025	13.9	0.1	4.0	2	2	1	3	3	3	2	AAA	domain
Mg_chelatase	PF01078.16	gi|479325970|ref|YP_007866025.1|	-	1.2e-07	31.1	0.6	0.0067	15.6	0.1	2.8	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
RNA_helicase	PF00910.17	gi|479325970|ref|YP_007866025.1|	-	1.6e-07	31.4	0.0	0.0046	17.1	0.0	2.8	2	0	0	2	2	2	2	RNA	helicase
NACHT	PF05729.7	gi|479325970|ref|YP_007866025.1|	-	2.3e-07	30.6	0.7	0.14	11.7	0.0	4.2	4	0	0	4	4	4	2	NACHT	domain
AAA_19	PF13245.1	gi|479325970|ref|YP_007866025.1|	-	1.1e-06	28.2	0.3	0.032	13.9	0.0	3.1	2	0	0	2	2	2	2	Part	of	AAA	domain
Vps4_C	PF09336.5	gi|479325970|ref|YP_007866025.1|	-	4.3e-06	26.5	1.5	0.023	14.6	0.1	3.2	3	0	0	3	3	2	2	Vps4	C	terminal	oligomerisation	domain
AAA_3	PF07726.6	gi|479325970|ref|YP_007866025.1|	-	5.2e-06	26.0	0.0	0.03	13.9	0.0	2.9	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
ABC_tran	PF00005.22	gi|479325970|ref|YP_007866025.1|	-	5.9e-06	26.6	0.0	0.84	9.9	0.0	3.7	3	0	0	3	3	3	2	ABC	transporter
AAA_24	PF13479.1	gi|479325970|ref|YP_007866025.1|	-	8e-06	25.5	1.2	0.055	13.0	0.0	2.8	2	0	0	2	2	2	2	AAA	domain
Sigma54_activ_2	PF14532.1	gi|479325970|ref|YP_007866025.1|	-	8.2e-06	25.9	0.0	0.23	11.4	0.0	2.7	2	0	0	2	2	2	2	Sigma-54	interaction	domain
Molydop_binding	PF01568.16	gi|479325970|ref|YP_007866025.1|	-	1.1e-05	25.1	0.1	6.6e-05	22.6	0.0	2.4	2	0	0	2	2	1	1	Molydopterin	dinucleotide	binding	domain
Sigma54_activat	PF00158.21	gi|479325970|ref|YP_007866025.1|	-	1.2e-05	24.8	0.8	0.69	9.3	0.0	4.5	4	1	0	4	4	4	2	Sigma-54	interaction	domain
DUF815	PF05673.8	gi|479325970|ref|YP_007866025.1|	-	1.2e-05	24.3	0.0	0.049	12.5	0.0	2.6	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
Bac_DnaA	PF00308.13	gi|479325970|ref|YP_007866025.1|	-	1.5e-05	24.8	0.0	0.0076	15.9	0.0	3.4	2	2	1	3	3	2	1	Bacterial	dnaA	protein
AAA_11	PF13086.1	gi|479325970|ref|YP_007866025.1|	-	5.9e-05	22.7	0.1	0.046	13.2	0.1	2.9	2	1	0	2	2	2	1	AAA	domain
UPF0079	PF02367.12	gi|479325970|ref|YP_007866025.1|	-	0.00018	21.1	0.0	0.43	10.2	0.0	2.6	2	0	0	2	2	2	2	Uncharacterised	P-loop	hydrolase	UPF0079
Parvo_NS1	PF01057.12	gi|479325970|ref|YP_007866025.1|	-	0.0003	19.7	0.1	0.66	8.7	0.0	2.4	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
PhoH	PF02562.11	gi|479325970|ref|YP_007866025.1|	-	0.00033	19.9	0.4	0.26	10.5	0.1	2.9	2	0	0	2	2	2	1	PhoH-like	protein
SKI	PF01202.17	gi|479325970|ref|YP_007866025.1|	-	0.00062	19.6	0.4	0.69	9.7	0.0	3.0	3	0	0	3	3	2	1	Shikimate	kinase
ATP-synt_ab	PF00006.20	gi|479325970|ref|YP_007866025.1|	-	0.00063	19.3	0.0	0.2	11.1	0.0	2.6	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
NB-ARC	PF00931.17	gi|479325970|ref|YP_007866025.1|	-	0.0014	17.5	0.0	0.64	8.8	0.0	2.6	2	0	0	2	2	2	1	NB-ARC	domain
AFG1_ATPase	PF03969.11	gi|479325970|ref|YP_007866025.1|	-	0.0031	16.3	0.1	1.8	7.2	0.0	2.7	2	1	0	2	2	2	1	AFG1-like	ATPase
KaiC	PF06745.8	gi|479325970|ref|YP_007866025.1|	-	0.0045	16.1	8.9	0.37	9.8	0.0	4.9	6	0	0	6	6	5	1	KaiC
AAA_29	PF13555.1	gi|479325970|ref|YP_007866025.1|	-	0.006	16.0	0.1	11	5.6	0.0	3.8	4	0	0	4	4	4	0	P-loop	containing	region	of	AAA	domain
NTPase_1	PF03266.10	gi|479325970|ref|YP_007866025.1|	-	0.007	16.0	4.7	8.2	6.1	0.0	4.5	3	2	1	5	5	3	0	NTPase
DUF2075	PF09848.4	gi|479325970|ref|YP_007866025.1|	-	0.0081	15.1	0.0	1.7	7.5	0.0	2.5	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
ResIII	PF04851.10	gi|479325970|ref|YP_007866025.1|	-	0.015	15.1	0.0	1.5	8.6	0.0	2.9	3	0	0	3	3	2	0	Type	III	restriction	enzyme,	res	subunit
T2SE	PF00437.15	gi|479325970|ref|YP_007866025.1|	-	0.018	13.9	0.0	2.9	6.7	0.0	2.6	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
IPT	PF01745.11	gi|479325970|ref|YP_007866025.1|	-	0.022	13.9	0.2	1.2	8.2	0.1	2.3	2	0	0	2	2	2	0	Isopentenyl	transferase
Guanylate_kin	PF00625.16	gi|479325970|ref|YP_007866025.1|	-	0.024	14.0	0.1	12	5.3	0.0	3.6	3	1	1	4	4	3	0	Guanylate	kinase
KTI12	PF08433.5	gi|479325970|ref|YP_007866025.1|	-	0.028	13.6	0.4	6.8	5.7	0.0	2.9	3	0	0	3	3	2	0	Chromatin	associated	protein	KTI12
MMR_HSR1	PF01926.18	gi|479325970|ref|YP_007866025.1|	-	0.035	14.0	0.0	2.5	8.0	0.0	3.0	2	1	0	2	2	2	0	50S	ribosome-binding	GTPase
AAA_10	PF12846.2	gi|479325970|ref|YP_007866025.1|	-	0.037	13.4	4.8	2.4	7.4	0.1	3.6	2	2	0	2	2	2	0	AAA-like	domain
Viral_helicase1	PF01443.13	gi|479325970|ref|YP_007866025.1|	-	0.037	13.5	0.0	2.7	7.4	0.0	2.5	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
AAA_30	PF13604.1	gi|479325970|ref|YP_007866025.1|	-	0.073	12.6	0.0	6	6.3	0.0	2.7	2	0	0	2	2	2	0	AAA	domain
AAA_23	PF13476.1	gi|479325970|ref|YP_007866025.1|	-	0.18	12.0	2.3	14	5.9	0.0	3.4	3	1	0	3	3	3	0	AAA	domain
PhosphMutase	PF10143.4	gi|479325971|ref|YP_007866026.1|	-	2.5e-61	206.2	0.0	4e-61	205.6	0.0	1.3	1	0	0	1	1	1	1	2,3-bisphosphoglycerate-independent	phosphoglycerate	mutase
Metalloenzyme	PF01676.13	gi|479325971|ref|YP_007866026.1|	-	1.7e-49	168.4	0.1	2e-49	168.2	0.1	1.0	1	0	0	1	1	1	1	Metalloenzyme	superfamily
Phosphodiest	PF01663.17	gi|479325971|ref|YP_007866026.1|	-	0.00063	19.1	0.0	0.00096	18.5	0.0	1.3	1	0	0	1	1	1	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
Sulfatase	PF00884.18	gi|479325971|ref|YP_007866026.1|	-	0.0013	17.9	0.0	0.0018	17.5	0.0	1.3	1	0	0	1	1	1	1	Sulfatase
HEPPP_synt_1	PF07307.6	gi|479325971|ref|YP_007866026.1|	-	0.11	11.9	0.1	0.19	11.1	0.0	1.3	1	0	0	1	1	1	0	Heptaprenyl	diphosphate	synthase	(HEPPP	synthase)	subunit	1
DUF359	PF04019.7	gi|479325972|ref|YP_007866027.1|	-	1.4e-38	131.0	1.2	1.8e-38	130.6	0.8	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF359)
Spt4	PF06093.8	gi|479325973|ref|YP_007866028.1|	-	2.6e-15	56.0	0.6	3e-15	55.8	0.4	1.1	1	0	0	1	1	1	1	Spt4/RpoE2	zinc	finger
DZR	PF12773.2	gi|479325973|ref|YP_007866028.1|	-	0.00059	19.6	1.3	0.00077	19.2	0.9	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|479325973|ref|YP_007866028.1|	-	0.0015	17.6	2.7	0.0021	17.1	1.9	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|479325973|ref|YP_007866028.1|	-	0.0048	16.3	2.6	0.0075	15.7	1.8	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
NRDD	PF13597.1	gi|479325973|ref|YP_007866028.1|	-	0.011	13.8	0.7	0.012	13.7	0.5	1.0	1	0	0	1	1	1	0	Anaerobic	ribonucleoside-triphosphate	reductase
zf-C3HC4_3	PF13920.1	gi|479325973|ref|YP_007866028.1|	-	0.021	14.5	1.6	0.03	13.9	1.1	1.2	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
RecR	PF02132.10	gi|479325973|ref|YP_007866028.1|	-	0.025	14.0	0.8	0.034	13.5	0.6	1.3	1	0	0	1	1	1	0	RecR	protein
TF_Zn_Ribbon	PF08271.7	gi|479325973|ref|YP_007866028.1|	-	0.027	13.7	4.0	0.1	11.9	0.3	2.4	1	1	1	2	2	2	0	TFIIB	zinc-binding
HypA	PF01155.14	gi|479325973|ref|YP_007866028.1|	-	0.032	13.9	0.5	0.033	13.8	0.3	1.2	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
Rad50_zn_hook	PF04423.9	gi|479325973|ref|YP_007866028.1|	-	0.036	13.5	1.4	0.057	12.8	1.0	1.5	1	1	0	1	1	1	0	Rad50	zinc	hook	motif
UPF0547	PF10571.4	gi|479325973|ref|YP_007866028.1|	-	0.037	13.7	3.5	0.059	13.0	2.4	1.4	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
NOB1_Zn_bind	PF08772.6	gi|479325973|ref|YP_007866028.1|	-	0.052	13.3	0.1	0.052	13.3	0.1	1.2	1	0	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
zf-P11	PF03854.9	gi|479325973|ref|YP_007866028.1|	-	0.07	12.6	0.2	0.27	10.7	0.2	1.7	2	0	0	2	2	2	0	P-11	zinc	finger
zf-RING_4	PF14570.1	gi|479325973|ref|YP_007866028.1|	-	0.11	12.0	0.8	0.17	11.5	0.6	1.2	1	0	0	1	1	1	0	RING/Ubox	like	zinc-binding	domain
DUF2072	PF09845.4	gi|479325973|ref|YP_007866028.1|	-	0.12	12.2	0.2	0.13	12.1	0.1	1.2	1	0	0	1	1	1	0	Zn-ribbon	containing	protein	(DUF2072)
Nop10p	PF04135.7	gi|479325973|ref|YP_007866028.1|	-	0.13	11.9	0.5	0.27	10.9	0.2	1.6	2	0	0	2	2	2	0	Nucleolar	RNA-binding	protein,	Nop10p	family
zf-C4H2	PF10146.4	gi|479325973|ref|YP_007866028.1|	-	0.15	12.0	0.4	0.19	11.7	0.3	1.2	1	0	0	1	1	1	0	Zinc	finger-containing	protein
Lar_restr_allev	PF14354.1	gi|479325973|ref|YP_007866028.1|	-	0.16	12.3	3.5	0.23	11.7	0.2	2.2	1	1	1	2	2	2	0	Restriction	alleviation	protein	Lar
DNA_ligase_ZBD	PF03119.11	gi|479325973|ref|YP_007866028.1|	-	0.18	11.5	0.7	0.18	11.5	0.5	1.6	2	0	0	2	2	1	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-C3HC4_2	PF13923.1	gi|479325973|ref|YP_007866028.1|	-	0.26	11.3	2.3	0.39	10.7	1.6	1.3	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
RRN7	PF11781.3	gi|479325973|ref|YP_007866028.1|	-	0.29	10.6	3.0	0.63	9.5	0.1	2.1	1	1	1	2	2	2	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
zf-RING_3	PF14369.1	gi|479325973|ref|YP_007866028.1|	-	0.54	10.3	2.9	1.3	9.0	2.1	1.6	1	1	1	2	2	2	0	zinc-finger
RNA_POL_M_15KD	PF02150.11	gi|479325973|ref|YP_007866028.1|	-	0.56	9.9	3.5	1.5	8.5	0.3	2.2	1	1	1	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
Auto_anti-p27	PF06677.7	gi|479325973|ref|YP_007866028.1|	-	0.61	9.8	3.3	1.2	9.0	2.3	1.4	1	0	0	1	1	1	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
Zn-ribbon_8	PF09723.5	gi|479325973|ref|YP_007866028.1|	-	0.99	9.4	5.2	21	5.1	3.9	2.2	1	1	1	2	2	2	0	Zinc	ribbon	domain
A2L_zn_ribbon	PF08792.5	gi|479325973|ref|YP_007866028.1|	-	1.1	8.7	3.7	4.6	6.8	2.6	1.8	1	1	0	1	1	1	0	A2L	zinc	ribbon	domain
SHS2_Rpb7-N	PF03876.12	gi|479325974|ref|YP_007866029.1|	-	2.2e-17	62.9	0.0	4.6e-17	61.8	0.0	1.6	1	0	0	1	1	1	1	SHS2	domain	found	in	N	terminus	of	Rpb7p/Rpc25p/MJ0397
S1	PF00575.18	gi|479325974|ref|YP_007866029.1|	-	2.7e-16	59.4	3.0	4.4e-16	58.7	2.1	1.3	1	0	0	1	1	1	1	S1	RNA	binding	domain
RNA_pol_Rbc25	PF08292.7	gi|479325974|ref|YP_007866029.1|	-	0.0061	16.7	0.0	0.0097	16.1	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	III	subunit	Rpc25
PIN	PF01850.16	gi|479325975|ref|YP_007866030.1|	-	1e-07	32.3	1.1	1.3e-07	32.0	0.7	1.1	1	0	0	1	1	1	1	PIN	domain
Fcf1	PF04900.7	gi|479325975|ref|YP_007866030.1|	-	0.0001	22.2	0.0	0.00015	21.8	0.0	1.2	1	0	0	1	1	1	1	Fcf1
PIN_4	PF13638.1	gi|479325975|ref|YP_007866030.1|	-	0.00065	19.8	1.1	0.011	15.8	0.8	2.0	1	1	0	1	1	1	1	PIN	domain
GTP_EFTU	PF00009.22	gi|479325976|ref|YP_007866031.1|	-	2.9e-42	144.2	0.0	4.7e-42	143.5	0.0	1.3	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
eIF2_C	PF09173.6	gi|479325976|ref|YP_007866031.1|	-	6.4e-32	109.4	1.8	1.5e-31	108.2	1.2	1.7	1	0	0	1	1	1	1	Initiation	factor	eIF2	gamma,	C	terminal
GTP_EFTU_D2	PF03144.20	gi|479325976|ref|YP_007866031.1|	-	1.8e-07	31.1	0.7	2e-06	27.8	0.1	2.6	2	1	0	2	2	2	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.18	gi|479325976|ref|YP_007866031.1|	-	0.00048	20.0	0.0	0.0009	19.1	0.0	1.5	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
PduV-EutP	PF10662.4	gi|479325976|ref|YP_007866031.1|	-	0.001	18.5	1.8	0.57	9.6	0.0	2.7	3	0	0	3	3	3	2	Ethanolamine	utilisation	-	propanediol	utilisation
ArgK	PF03308.11	gi|479325976|ref|YP_007866031.1|	-	0.029	13.1	0.3	0.22	10.2	0.0	2.0	2	0	0	2	2	2	0	ArgK	protein
FeoB_N	PF02421.13	gi|479325976|ref|YP_007866031.1|	-	0.083	12.1	0.3	5.2	6.3	0.0	2.5	2	0	0	2	2	2	0	Ferrous	iron	transport	protein	B
Ribosomal_S6e	PF01092.14	gi|479325977|ref|YP_007866032.1|	-	3.4e-26	91.3	1.6	1.5e-24	86.0	0.0	2.9	2	1	1	3	3	3	2	Ribosomal	protein	S6e
CbiX	PF01903.12	gi|479325978|ref|YP_007866033.1|	-	4.8e-27	94.1	0.0	5.4e-27	93.9	0.0	1.0	1	0	0	1	1	1	1	CbiX
CbiK	PF06180.6	gi|479325978|ref|YP_007866033.1|	-	1.1e-05	24.7	0.0	1.2e-05	24.5	0.0	1.0	1	0	0	1	1	1	1	Cobalt	chelatase	(CbiK)
Ribosomal_S13_N	PF08069.7	gi|479325979|ref|YP_007866034.1|	-	2.1e-24	85.1	0.7	1.2e-23	82.7	0.2	2.1	2	0	0	2	2	2	1	Ribosomal	S13/S15	N-terminal	domain
Ribosomal_S15	PF00312.17	gi|479325979|ref|YP_007866034.1|	-	3.9e-18	64.9	0.0	5.2e-18	64.5	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S15
DUF2408	PF10303.4	gi|479325979|ref|YP_007866034.1|	-	0.028	14.5	0.0	0.045	13.8	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2408)
RecX	PF02631.11	gi|479325979|ref|YP_007866034.1|	-	0.1	12.7	0.4	8.6	6.5	0.0	2.1	2	0	0	2	2	2	0	RecX	family
YozD	PF14162.1	gi|479325979|ref|YP_007866034.1|	-	0.11	12.6	0.0	0.25	11.4	0.0	1.6	1	0	0	1	1	1	0	YozD-like	protein
Meth_synt_2	PF01717.13	gi|479325980|ref|YP_007866035.1|	-	7.2e-91	304.5	0.0	8.3e-91	304.3	0.0	1.0	1	0	0	1	1	1	1	Cobalamin-independent	synthase,	Catalytic	domain
Meth_synt_1	PF08267.7	gi|479325980|ref|YP_007866035.1|	-	8.3e-29	100.8	1.2	1.9e-23	83.2	1.0	2.1	2	0	0	2	2	2	2	Cobalamin-independent	synthase,	N-terminal	domain
URO-D	PF01208.12	gi|479325980|ref|YP_007866035.1|	-	0.00066	18.6	0.0	0.0011	17.9	0.0	1.3	1	0	0	1	1	1	1	Uroporphyrinogen	decarboxylase	(URO-D)
Meth_synt_1	PF08267.7	gi|479325981|ref|YP_007866036.1|	-	5.6e-57	193.3	2.8	1.5e-55	188.6	1.9	2.0	1	1	0	1	1	1	1	Cobalamin-independent	synthase,	N-terminal	domain
Meth_synt_2	PF01717.13	gi|479325981|ref|YP_007866036.1|	-	1.1e-09	37.7	0.0	1.6e-09	37.1	0.0	1.3	1	0	0	1	1	1	1	Cobalamin-independent	synthase,	Catalytic	domain
PCNA_N	PF00705.13	gi|479325982|ref|YP_007866037.1|	-	8.9e-16	57.5	1.6	1.9e-15	56.5	0.3	2.0	2	0	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	N-terminal	domain
PCNA_C	PF02747.10	gi|479325982|ref|YP_007866037.1|	-	2.8e-10	40.2	0.5	7e-08	32.4	0.0	2.5	2	0	0	2	2	2	2	Proliferating	cell	nuclear	antigen,	C-terminal	domain
Rad9	PF04139.8	gi|479325982|ref|YP_007866037.1|	-	1.4e-06	27.6	0.6	4.6e-06	25.9	0.4	1.8	1	1	0	1	1	1	1	Rad9
Rad1	PF02144.11	gi|479325982|ref|YP_007866037.1|	-	3.7e-06	25.9	1.8	0.0013	17.5	0.1	2.1	1	1	1	2	2	2	2	Repair	protein	Rad1/Rec1/Rad17
DNA_pol3_beta_3	PF02768.10	gi|479325982|ref|YP_007866037.1|	-	0.00038	20.0	4.8	0.17	11.4	0.8	2.6	2	1	0	2	2	2	2	DNA	polymerase	III	beta	subunit,	C-terminal	domain
Hus1	PF04005.7	gi|479325982|ref|YP_007866037.1|	-	0.0073	15.2	0.3	0.017	14.0	0.1	1.6	2	0	0	2	2	2	1	Hus1-like	protein
ocr	PF08684.5	gi|479325982|ref|YP_007866037.1|	-	0.008	16.2	0.8	0.024	14.6	0.1	2.1	2	0	0	2	2	2	1	DNA	mimic	ocr
RNA_pol_A_bac	PF01000.21	gi|479325982|ref|YP_007866037.1|	-	0.062	13.4	0.2	0.21	11.7	0.2	1.9	2	0	0	2	2	2	0	RNA	polymerase	Rpb3/RpoA	insert	domain
GATase_3	PF07685.9	gi|479325983|ref|YP_007866038.1|	-	4.1e-33	114.2	0.1	7e-33	113.4	0.0	1.4	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
CbiA	PF01656.18	gi|479325983|ref|YP_007866038.1|	-	9.4e-18	64.3	0.0	1.9e-17	63.2	0.0	1.5	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_26	PF13500.1	gi|479325983|ref|YP_007866038.1|	-	1.6e-13	50.6	0.1	2.9e-09	36.8	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
DUF2208	PF09973.4	gi|479325984|ref|YP_007866039.1|	-	4.5e-78	261.7	17.8	5.1e-78	261.5	12.3	1.0	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2208)
DUF106	PF01956.11	gi|479325984|ref|YP_007866039.1|	-	3.8e-05	23.2	2.6	3.8e-05	23.2	1.8	2.0	1	1	1	2	2	2	1	Integral	membrane	protein	DUF106
YniB	PF14002.1	gi|479325984|ref|YP_007866039.1|	-	0.0086	15.5	1.5	0.0086	15.5	1.0	2.0	1	1	1	2	2	2	1	YniB-like	protein
ApoC-I	PF04691.7	gi|479325984|ref|YP_007866039.1|	-	0.093	12.4	1.4	0.38	10.4	0.2	2.1	2	0	0	2	2	2	0	Apolipoprotein	C-I	(ApoC-1)
DHBP_synthase	PF00926.14	gi|479325985|ref|YP_007866040.1|	-	5.9e-56	188.7	0.0	7.4e-56	188.4	0.0	1.0	1	0	0	1	1	1	1	3,4-dihydroxy-2-butanone	4-phosphate	synthase
DMRL_synthase	PF00885.14	gi|479325986|ref|YP_007866041.1|	-	3.7e-18	65.5	0.1	4.3e-18	65.3	0.0	1.0	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
DUF1310	PF07006.6	gi|479325986|ref|YP_007866041.1|	-	0.038	13.5	0.8	6.1	6.3	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1310)
DMRL_synthase	PF00885.14	gi|479325987|ref|YP_007866042.1|	-	5.3e-41	139.6	1.6	6e-41	139.4	1.1	1.0	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
Transaldolase	PF00923.14	gi|479325987|ref|YP_007866042.1|	-	0.021	13.9	0.1	0.055	12.5	0.0	1.6	1	1	0	1	1	1	0	Transaldolase
GcpE	PF04551.9	gi|479325987|ref|YP_007866042.1|	-	0.066	12.0	0.1	0.078	11.7	0.1	1.2	1	0	0	1	1	1	0	GcpE	protein
ADSL_C	PF10397.4	gi|479325987|ref|YP_007866042.1|	-	0.1	12.6	0.1	0.25	11.3	0.1	1.7	1	0	0	1	1	1	0	Adenylosuccinate	lyase	C-terminus
RII_binding_1	PF10522.4	gi|479325987|ref|YP_007866042.1|	-	0.17	12.0	1.0	4.1	7.9	0.2	2.9	2	0	0	2	2	2	0	RII	binding	domain
GGDN	PF05165.7	gi|479325988|ref|YP_007866043.1|	-	4.5e-37	127.4	0.0	6.6e-37	126.8	0.0	1.3	1	1	0	1	1	1	1	GGDN	family
Amidohydro_1	PF01979.15	gi|479325989|ref|YP_007866044.1|	-	5.1e-12	46.1	0.3	1.1e-08	35.1	0.0	2.8	2	1	1	3	3	3	2	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|479325989|ref|YP_007866044.1|	-	3.2e-11	43.7	0.0	2.9e-10	40.6	0.0	2.0	1	1	0	1	1	1	1	Amidohydrolase
Amidohydro_5	PF13594.1	gi|479325989|ref|YP_007866044.1|	-	1.5e-05	24.6	0.0	3.3e-05	23.6	0.0	1.5	1	0	0	1	1	1	1	Amidohydrolase
MGDG_synth	PF06925.6	gi|479325989|ref|YP_007866044.1|	-	0.04	13.8	0.1	0.077	12.8	0.1	1.5	1	0	0	1	1	1	0	Monogalactosyldiacylglycerol	(MGDG)	synthase
DUF2283	PF10049.4	gi|479325989|ref|YP_007866044.1|	-	0.08	12.8	0.2	8.8	6.2	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2283)
PCNA_N	PF00705.13	gi|479325990|ref|YP_007866045.1|	-	3.4e-06	26.5	1.1	2.9e-05	23.5	0.1	2.2	2	0	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	N-terminal	domain
Rad9	PF04139.8	gi|479325990|ref|YP_007866045.1|	-	0.00052	19.2	0.4	0.0006	19.0	0.3	1.0	1	0	0	1	1	1	1	Rad9
Hus1	PF04005.7	gi|479325990|ref|YP_007866045.1|	-	0.013	14.5	0.2	0.023	13.6	0.1	1.4	1	1	0	1	1	1	0	Hus1-like	protein
Antitoxin-MazE	PF04014.13	gi|479325990|ref|YP_007866045.1|	-	0.48	10.2	2.7	2.4	7.9	0.3	2.7	2	1	0	2	2	2	0	Antidote-toxin	recognition	MazE
RNA_pol_Rpo13	PF12136.3	gi|479325991|ref|YP_007866046.1|	-	4.3e-19	67.9	4.3	4.3e-19	67.9	3.0	2.3	2	0	0	2	2	2	1	RNA	polymerase	Rpo13	subunit	HTH	domain
AAA_10	PF12846.2	gi|479325992|ref|YP_007866047.1|	-	2.5e-28	99.3	0.6	3.6e-28	98.8	0.4	1.2	1	0	0	1	1	1	1	AAA-like	domain
DUF87	PF01935.12	gi|479325992|ref|YP_007866047.1|	-	1.4e-10	41.3	0.7	2.7e-10	40.4	0.5	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF87
AAA_22	PF13401.1	gi|479325992|ref|YP_007866047.1|	-	6.1e-05	23.1	0.2	0.49	10.5	0.0	2.8	3	0	0	3	3	2	2	AAA	domain
ABC_tran	PF00005.22	gi|479325992|ref|YP_007866047.1|	-	0.00017	21.9	0.0	0.00035	20.8	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
TrwB_AAD_bind	PF10412.4	gi|479325992|ref|YP_007866047.1|	-	0.00017	20.3	0.0	0.46	9.0	0.0	2.3	2	0	0	2	2	2	2	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
Pox_A32	PF04665.7	gi|479325992|ref|YP_007866047.1|	-	0.001	18.3	0.1	0.16	11.2	0.1	2.3	2	0	0	2	2	2	1	Poxvirus	A32	protein
AAA_18	PF13238.1	gi|479325992|ref|YP_007866047.1|	-	0.0023	18.2	0.1	0.0074	16.5	0.0	2.0	2	0	0	2	2	1	1	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|479325992|ref|YP_007866047.1|	-	0.0033	16.9	0.0	0.006	16.0	0.0	1.3	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
AAA_29	PF13555.1	gi|479325992|ref|YP_007866047.1|	-	0.0041	16.6	0.2	0.013	15.0	0.1	1.8	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
TraG-D_C	PF12696.2	gi|479325992|ref|YP_007866047.1|	-	0.0041	16.9	0.0	0.013	15.3	0.0	1.8	2	0	0	2	2	2	1	TraM	recognition	site	of	TraD	and	TraG
AAA_24	PF13479.1	gi|479325992|ref|YP_007866047.1|	-	0.0093	15.5	0.0	0.014	14.9	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|479325992|ref|YP_007866047.1|	-	0.01	16.6	0.4	0.023	15.5	0.3	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_16	PF13191.1	gi|479325992|ref|YP_007866047.1|	-	0.011	15.7	0.0	0.021	14.7	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
Arch_ATPase	PF01637.13	gi|479325992|ref|YP_007866047.1|	-	0.014	15.0	0.2	0.048	13.3	0.0	1.9	2	0	0	2	2	2	0	Archaeal	ATPase
T2SE	PF00437.15	gi|479325992|ref|YP_007866047.1|	-	0.022	13.6	0.0	0.046	12.6	0.0	1.5	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
AIG1	PF04548.11	gi|479325992|ref|YP_007866047.1|	-	0.026	13.6	0.3	0.082	11.9	0.1	1.8	2	0	0	2	2	2	0	AIG1	family
MMR_HSR1	PF01926.18	gi|479325992|ref|YP_007866047.1|	-	0.029	14.3	0.1	0.48	10.3	0.0	2.5	2	0	0	2	2	2	0	50S	ribosome-binding	GTPase
IstB_IS21	PF01695.12	gi|479325992|ref|YP_007866047.1|	-	0.047	13.0	0.0	0.087	12.2	0.0	1.3	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA_32	PF13654.1	gi|479325992|ref|YP_007866047.1|	-	0.051	12.2	0.0	0.081	11.5	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
DUF815	PF05673.8	gi|479325992|ref|YP_007866047.1|	-	0.061	12.2	0.0	0.1	11.4	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
DUF258	PF03193.11	gi|479325992|ref|YP_007866047.1|	-	0.079	12.1	0.0	0.14	11.3	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
Miro	PF08477.8	gi|479325992|ref|YP_007866047.1|	-	0.091	13.2	0.0	0.21	12.1	0.0	1.6	1	0	0	1	1	1	0	Miro-like	protein
Zot	PF05707.7	gi|479325992|ref|YP_007866047.1|	-	0.12	11.8	0.6	0.77	9.1	0.0	2.1	2	0	0	2	2	2	0	Zonular	occludens	toxin	(Zot)
Zeta_toxin	PF06414.7	gi|479325992|ref|YP_007866047.1|	-	0.19	10.8	0.0	0.33	10.0	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
SMC_N	PF02463.14	gi|479325992|ref|YP_007866047.1|	-	0.22	10.7	0.7	0.39	9.9	0.5	1.3	1	0	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|479325992|ref|YP_007866047.1|	-	0.24	11.6	6.8	0.64	10.3	4.7	1.8	1	1	0	1	1	1	0	AAA	domain
DEAD	PF00270.24	gi|479325993|ref|YP_007866048.1|	-	1.2e-35	122.4	0.3	9.5e-35	119.5	0.0	2.5	3	1	1	4	4	4	1	DEAD/DEAH	box	helicase
DEAD_assoc	PF08494.6	gi|479325993|ref|YP_007866048.1|	-	1.1e-22	80.6	0.0	3.8e-22	78.9	0.0	1.9	2	0	0	2	2	2	1	DEAD/H	associated
Helicase_C	PF00271.26	gi|479325993|ref|YP_007866048.1|	-	1.5e-18	66.3	1.3	7.2e-16	57.8	0.2	2.9	3	0	0	3	3	3	2	Helicase	conserved	C-terminal	domain
SecA_DEAD	PF07517.9	gi|479325993|ref|YP_007866048.1|	-	0.006	15.9	0.0	0.01	15.1	0.0	1.4	1	0	0	1	1	1	1	SecA	DEAD-like	domain
ResIII	PF04851.10	gi|479325993|ref|YP_007866048.1|	-	0.02	14.7	0.0	0.12	12.1	0.0	2.3	2	1	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
Ribosomal_L14e	PF01929.12	gi|479325994|ref|YP_007866049.1|	-	4.4e-05	23.7	0.2	6.5e-05	23.2	0.1	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L14
KOW	PF00467.24	gi|479325994|ref|YP_007866049.1|	-	0.0027	17.3	2.5	0.0053	16.4	1.7	1.5	1	0	0	1	1	1	1	KOW	motif
XisI	PF08869.6	gi|479325994|ref|YP_007866049.1|	-	0.019	15.1	0.1	0.022	14.8	0.0	1.1	1	0	0	1	1	1	0	XisI	protein
DKCLD	PF08068.7	gi|479325995|ref|YP_007866050.1|	-	2.5e-18	65.7	0.3	3.6e-18	65.2	0.2	1.2	1	0	0	1	1	1	1	DKCLD	(NUC011)	domain
TruB_N	PF01509.13	gi|479325995|ref|YP_007866050.1|	-	0.0046	17.1	0.2	0.013	15.7	0.0	1.7	2	0	0	2	2	2	1	TruB	family	pseudouridylate	synthase	(N	terminal	domain)
PUA	PF01472.15	gi|479325996|ref|YP_007866051.1|	-	2e-19	69.0	0.4	1.4e-18	66.4	0.1	2.0	2	0	0	2	2	2	1	PUA	domain
TruB_N	PF01509.13	gi|479325996|ref|YP_007866051.1|	-	4.4e-10	39.9	0.1	4.2e-08	33.4	0.1	2.9	1	1	1	2	2	2	1	TruB	family	pseudouridylate	synthase	(N	terminal	domain)
DUF4172	PF13776.1	gi|479325996|ref|YP_007866051.1|	-	0.062	13.3	0.0	0.24	11.5	0.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4172)
MTS	PF05175.9	gi|479325997|ref|YP_007866052.1|	-	2e-38	131.4	0.0	2.3e-38	131.2	0.0	1.0	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.1	gi|479325997|ref|YP_007866052.1|	-	1e-13	51.1	0.1	1.4e-13	50.6	0.1	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|479325997|ref|YP_007866052.1|	-	7.4e-11	42.6	0.0	1e-10	42.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|479325997|ref|YP_007866052.1|	-	1.4e-09	37.9	0.0	1.8e-09	37.6	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|479325997|ref|YP_007866052.1|	-	2.7e-09	36.6	0.0	3.2e-09	36.3	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Met_10	PF02475.11	gi|479325997|ref|YP_007866052.1|	-	5.5e-08	32.6	1.0	3.5e-07	30.0	0.1	1.9	1	1	1	2	2	2	1	Met-10+	like-protein
Methyltransf_4	PF02390.12	gi|479325997|ref|YP_007866052.1|	-	2.3e-05	23.5	0.1	3.9e-05	22.7	0.0	1.3	2	0	0	2	2	2	1	Putative	methyltransferase
Methyltransf_12	PF08242.7	gi|479325997|ref|YP_007866052.1|	-	3.9e-05	24.0	0.0	6.8e-05	23.2	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|479325997|ref|YP_007866052.1|	-	5.3e-05	23.5	0.0	6.8e-05	23.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|479325997|ref|YP_007866052.1|	-	7.6e-05	22.3	0.1	0.0001	21.8	0.1	1.3	1	1	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
GidB	PF02527.10	gi|479325997|ref|YP_007866052.1|	-	0.0001	21.5	0.2	0.00018	20.7	0.1	1.4	1	1	0	1	1	1	1	rRNA	small	subunit	methyltransferase	G
Methyltransf_16	PF10294.4	gi|479325997|ref|YP_007866052.1|	-	0.00016	21.1	0.1	0.00031	20.2	0.0	1.6	1	1	0	1	1	1	1	Putative	methyltransferase
Methyltransf_11	PF08241.7	gi|479325997|ref|YP_007866052.1|	-	0.00017	22.0	0.0	0.0004	20.8	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|479325997|ref|YP_007866052.1|	-	0.00034	20.2	0.0	0.00041	19.9	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Cons_hypoth95	PF03602.10	gi|479325997|ref|YP_007866052.1|	-	0.00067	19.0	0.0	0.0008	18.8	0.0	1.1	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
N6_Mtase	PF02384.11	gi|479325997|ref|YP_007866052.1|	-	0.002	17.2	0.0	0.0022	17.1	0.0	1.1	1	0	0	1	1	1	1	N-6	DNA	Methylase
FmrO	PF07091.6	gi|479325997|ref|YP_007866052.1|	-	0.0027	16.7	0.0	0.0036	16.3	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	RNA	methyltransferase	(FmrO)
Methyltransf_23	PF13489.1	gi|479325997|ref|YP_007866052.1|	-	0.0034	17.1	0.0	0.004	16.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
TehB	PF03848.9	gi|479325997|ref|YP_007866052.1|	-	0.0042	16.2	0.0	0.0068	15.5	0.0	1.3	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
TRM	PF02005.11	gi|479325997|ref|YP_007866052.1|	-	0.027	13.3	0.0	0.034	13.0	0.0	1.1	1	0	0	1	1	1	0	N2,N2-dimethylguanosine	tRNA	methyltransferase
CMAS	PF02353.15	gi|479325997|ref|YP_007866052.1|	-	0.043	12.8	0.0	0.051	12.6	0.0	1.2	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
DUF633	PF04816.7	gi|479325997|ref|YP_007866052.1|	-	0.055	12.8	0.1	0.079	12.2	0.1	1.2	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF633)
Methyltransf_32	PF13679.1	gi|479325997|ref|YP_007866052.1|	-	0.15	11.7	0.0	0.19	11.3	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
Helicase_RecD	PF05127.9	gi|479325998|ref|YP_007866053.1|	-	5.6e-51	172.6	0.0	1e-50	171.8	0.0	1.4	1	0	0	1	1	1	1	Helicase
GNAT_acetyltr_2	PF13718.1	gi|479325998|ref|YP_007866053.1|	-	6.3e-43	146.3	0.0	6.2e-42	143.1	0.0	2.1	1	1	0	1	1	1	1	GNAT	acetyltransferase	2
DUF1726	PF08351.6	gi|479325998|ref|YP_007866053.1|	-	3e-18	65.2	0.0	6.4e-18	64.2	0.0	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1726)
Acetyltransf_7	PF13508.1	gi|479325998|ref|YP_007866053.1|	-	7.2e-09	35.6	0.0	2.9e-08	33.7	0.0	2.1	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.19	gi|479325998|ref|YP_007866053.1|	-	9.2e-06	25.6	0.0	2.1e-05	24.4	0.0	1.7	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
AAA_22	PF13401.1	gi|479325998|ref|YP_007866053.1|	-	2.8e-05	24.2	0.1	0.00029	20.9	0.0	2.6	2	1	1	3	3	3	1	AAA	domain
tRNA_bind_2	PF13725.1	gi|479325998|ref|YP_007866053.1|	-	5.1e-05	23.3	0.1	0.00013	21.9	0.0	1.7	1	0	0	1	1	1	1	Possible	tRNA	binding	domain
AAA_30	PF13604.1	gi|479325998|ref|YP_007866053.1|	-	0.0027	17.3	0.0	0.005	16.4	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
Acetyltransf_CG	PF14542.1	gi|479325998|ref|YP_007866053.1|	-	0.055	13.3	0.0	0.2	11.5	0.0	1.9	2	0	0	2	2	2	0	GCN5-related	N-acetyl-transferase
ATG16	PF08614.6	gi|479325999|ref|YP_007866054.1|	-	1.1e-09	38.3	3.4	1.9e-09	37.6	2.3	1.3	1	0	0	1	1	1	1	Autophagy	protein	16	(ATG16)
ADIP	PF11559.3	gi|479325999|ref|YP_007866054.1|	-	3.3e-09	36.8	5.0	1.5e-06	28.1	0.2	2.1	1	1	1	2	2	2	2	Afadin-	and	alpha	-actinin-Binding
TMF_DNA_bd	PF12329.3	gi|479325999|ref|YP_007866054.1|	-	2.1e-08	33.8	8.4	0.00046	19.9	2.0	2.3	1	1	1	2	2	2	2	TATA	element	modulatory	factor	1	DNA	binding
Reo_sigmaC	PF04582.7	gi|479325999|ref|YP_007866054.1|	-	1.1e-07	31.4	13.6	2e-07	30.5	9.4	1.5	1	0	0	1	1	1	1	Reovirus	sigma	C	capsid	protein
IncA	PF04156.9	gi|479325999|ref|YP_007866054.1|	-	4.7e-07	29.6	1.6	4.7e-07	29.6	1.1	3.0	2	1	0	3	3	1	1	IncA	protein
DivIC	PF04977.10	gi|479325999|ref|YP_007866054.1|	-	1.7e-06	27.3	0.8	0.17	11.4	0.0	3.3	1	1	2	3	3	3	2	Septum	formation	initiator
MscS_porin	PF12795.2	gi|479325999|ref|YP_007866054.1|	-	1.9e-06	27.3	4.6	2.9e-06	26.8	3.2	1.1	1	0	0	1	1	1	1	Mechanosensitive	ion	channel	porin	domain
AAA_13	PF13166.1	gi|479325999|ref|YP_007866054.1|	-	3.6e-06	25.7	2.4	5.2e-06	25.2	1.7	1.1	1	0	0	1	1	1	1	AAA	domain
Baculo_PEP_C	PF04513.7	gi|479325999|ref|YP_007866054.1|	-	3.8e-06	26.7	25.9	3.8e-06	26.7	18.0	2.4	2	2	1	3	3	1	1	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
SlyX	PF04102.7	gi|479325999|ref|YP_007866054.1|	-	4.8e-06	26.8	3.0	0.002	18.4	0.2	2.4	1	1	1	2	2	2	2	SlyX
TBPIP	PF07106.8	gi|479325999|ref|YP_007866054.1|	-	7.1e-06	25.6	4.1	0.0015	18.1	1.2	2.1	1	1	1	2	2	2	2	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
CENP-F_leu_zip	PF10473.4	gi|479325999|ref|YP_007866054.1|	-	7.4e-06	25.8	1.4	0.0025	17.6	0.5	1.8	1	1	1	2	2	2	2	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
TMF_TATA_bd	PF12325.3	gi|479325999|ref|YP_007866054.1|	-	1e-05	25.2	2.5	0.00078	19.1	0.7	2.5	1	1	1	2	2	2	1	TATA	element	modulatory	factor	1	TATA	binding
Filament	PF00038.16	gi|479325999|ref|YP_007866054.1|	-	1.9e-05	24.2	0.8	4.3e-05	23.1	0.5	1.4	1	1	0	1	1	1	1	Intermediate	filament	protein
Myosin_tail_1	PF01576.14	gi|479325999|ref|YP_007866054.1|	-	3.2e-05	21.8	0.5	4.2e-05	21.5	0.4	1.0	1	0	0	1	1	1	1	Myosin	tail
GAS	PF13851.1	gi|479325999|ref|YP_007866054.1|	-	3.7e-05	23.0	0.1	5.2e-05	22.5	0.0	1.1	1	0	0	1	1	1	1	Growth-arrest	specific	micro-tubule	binding
FlaC_arch	PF05377.6	gi|479325999|ref|YP_007866054.1|	-	8.3e-05	22.3	8.1	0.19	11.6	0.4	3.5	1	1	1	3	3	3	1	Flagella	accessory	protein	C	(FlaC)
DUF603	PF04645.7	gi|479325999|ref|YP_007866054.1|	-	0.00012	22.0	3.4	0.0045	16.9	0.3	2.2	1	1	1	2	2	2	1	Protein	of	unknown	function,	DUF603
CarboxypepD_reg	PF13620.1	gi|479325999|ref|YP_007866054.1|	-	0.00014	21.8	0.5	0.00014	21.8	0.3	2.7	2	1	0	2	2	1	1	Carboxypeptidase	regulatory-like	domain
APG6	PF04111.7	gi|479325999|ref|YP_007866054.1|	-	0.00019	20.5	0.1	0.00027	20.1	0.0	1.1	1	0	0	1	1	1	1	Autophagy	protein	Apg6
NTR2	PF15458.1	gi|479325999|ref|YP_007866054.1|	-	0.00021	20.6	0.9	0.073	12.3	0.0	2.1	1	1	1	2	2	2	1	Nineteen	complex-related	protein	2
Spc7	PF08317.6	gi|479325999|ref|YP_007866054.1|	-	0.00027	19.7	3.5	0.00056	18.6	2.4	1.4	1	1	0	1	1	1	1	Spc7	kinetochore	protein
NPV_P10	PF05531.7	gi|479325999|ref|YP_007866054.1|	-	0.00029	21.0	9.5	0.049	13.8	0.6	2.6	1	1	1	2	2	2	2	Nucleopolyhedrovirus	P10	protein
Phage_GP20	PF06810.6	gi|479325999|ref|YP_007866054.1|	-	0.00033	20.1	1.2	0.0021	17.4	1.0	1.8	1	1	1	2	2	2	1	Phage	minor	structural	protein	GP20
Seryl_tRNA_N	PF02403.17	gi|479325999|ref|YP_007866054.1|	-	0.00033	20.6	2.2	0.0049	16.8	1.5	2.1	1	1	0	1	1	1	1	Seryl-tRNA	synthetase	N-terminal	domain
IFT57	PF10498.4	gi|479325999|ref|YP_007866054.1|	-	0.00039	19.2	2.4	0.00089	18.0	1.8	1.4	1	1	0	1	1	1	1	Intra-flagellar	transport	protein	57
Cast	PF10174.4	gi|479325999|ref|YP_007866054.1|	-	0.00039	18.6	0.1	0.00058	18.0	0.1	1.1	1	0	0	1	1	1	1	RIM-binding	protein	of	the	cytomatrix	active	zone
DUF869	PF05911.6	gi|479325999|ref|YP_007866054.1|	-	0.00049	18.4	0.2	0.00074	17.9	0.1	1.2	1	0	0	1	1	1	1	Plant	protein	of	unknown	function	(DUF869)
Mod_r	PF07200.8	gi|479325999|ref|YP_007866054.1|	-	0.00051	19.9	1.2	0.0011	18.9	0.7	1.5	1	1	0	1	1	1	1	Modifier	of	rudimentary	(Mod(r))	protein
WEMBL	PF05701.6	gi|479325999|ref|YP_007866054.1|	-	0.00061	18.3	1.5	0.00094	17.7	1.1	1.2	1	0	0	1	1	1	1	Weak	chloroplast	movement	under	blue	light
EzrA	PF06160.7	gi|479325999|ref|YP_007866054.1|	-	0.00063	18.0	0.4	0.00063	18.0	0.3	1.8	2	0	0	2	2	1	1	Septation	ring	formation	regulator,	EzrA
CCDC155	PF14662.1	gi|479325999|ref|YP_007866054.1|	-	0.00065	19.3	0.2	0.00097	18.7	0.1	1.1	1	0	0	1	1	1	1	Coiled-coil	region	of	CCDC155
Laminin_II	PF06009.7	gi|479325999|ref|YP_007866054.1|	-	0.0007	19.3	9.8	0.044	13.5	2.6	2.2	1	1	1	2	2	2	2	Laminin	Domain	II
DUF2730	PF10805.3	gi|479325999|ref|YP_007866054.1|	-	0.00077	19.1	1.9	0.025	14.2	0.5	2.8	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF2730)
DUF4140	PF13600.1	gi|479325999|ref|YP_007866054.1|	-	0.00096	19.5	1.0	0.36	11.2	0.1	3.0	2	1	1	3	3	2	1	N-terminal	domain	of	unknown	function	(DUF4140)
PspA_IM30	PF04012.7	gi|479325999|ref|YP_007866054.1|	-	0.0012	18.2	1.1	0.0057	16.0	0.7	1.8	1	1	1	2	2	2	1	PspA/IM30	family
DUF3450	PF11932.3	gi|479325999|ref|YP_007866054.1|	-	0.0016	17.8	2.4	0.28	10.4	0.3	2.1	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF3450)
DUF972	PF06156.8	gi|479325999|ref|YP_007866054.1|	-	0.0016	18.7	3.4	0.88	9.9	0.7	2.2	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF972)
Prefoldin_2	PF01920.15	gi|479325999|ref|YP_007866054.1|	-	0.0023	17.6	0.8	0.74	9.5	0.5	2.5	1	1	0	1	1	1	1	Prefoldin	subunit
Cep57_MT_bd	PF06657.8	gi|479325999|ref|YP_007866054.1|	-	0.0023	17.8	0.1	1.9	8.5	0.0	2.9	1	1	2	3	3	3	0	Centrosome	microtubule-binding	domain	of	Cep57
FlxA	PF14282.1	gi|479325999|ref|YP_007866054.1|	-	0.0026	17.6	10.7	0.012	15.5	1.9	2.6	1	1	1	2	2	2	2	FlxA-like	protein
BRE1	PF08647.6	gi|479325999|ref|YP_007866054.1|	-	0.0028	17.6	0.4	0.0049	16.8	0.3	1.4	1	0	0	1	1	1	1	BRE1	E3	ubiquitin	ligase
Tektin	PF03148.9	gi|479325999|ref|YP_007866054.1|	-	0.0029	16.2	2.8	0.18	10.2	0.2	2.1	1	1	1	2	2	2	2	Tektin	family
DUF2968	PF11180.3	gi|479325999|ref|YP_007866054.1|	-	0.0038	16.6	0.2	0.0064	15.9	0.1	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2968)
CENP-Q	PF13094.1	gi|479325999|ref|YP_007866054.1|	-	0.0048	16.9	2.2	0.016	15.2	1.5	1.7	1	1	0	1	1	1	1	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
COG5	PF10392.4	gi|479325999|ref|YP_007866054.1|	-	0.0059	16.5	7.2	0.2	11.6	0.5	2.2	1	1	1	2	2	2	2	Golgi	transport	complex	subunit	5
Tropomyosin_1	PF12718.2	gi|479325999|ref|YP_007866054.1|	-	0.0063	16.3	0.3	0.016	15.0	0.2	1.6	1	1	0	1	1	1	1	Tropomyosin	like
Fib_alpha	PF08702.5	gi|479325999|ref|YP_007866054.1|	-	0.0065	16.6	4.8	0.07	13.2	3.4	2.3	1	1	0	1	1	1	1	Fibrinogen	alpha/beta	chain	family
Nup54	PF13874.1	gi|479325999|ref|YP_007866054.1|	-	0.0071	16.0	1.4	0.012	15.2	1.0	1.3	1	0	0	1	1	1	1	Nucleoporin	complex	subunit	54
BLOC1_2	PF10046.4	gi|479325999|ref|YP_007866054.1|	-	0.0074	16.4	6.9	0.1	12.7	1.3	2.6	1	1	1	2	2	2	2	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
DUF4527	PF15030.1	gi|479325999|ref|YP_007866054.1|	-	0.0076	15.5	0.1	0.013	14.8	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4527)
Bacillus_HBL	PF05791.6	gi|479325999|ref|YP_007866054.1|	-	0.008	15.5	7.1	0.041	13.2	1.5	2.4	1	1	1	2	2	2	1	Bacillus	haemolytic	enterotoxin	(HBL)
DUF1664	PF07889.7	gi|479325999|ref|YP_007866054.1|	-	0.0095	15.7	0.7	0.0095	15.7	0.5	2.7	2	1	1	3	3	2	1	Protein	of	unknown	function	(DUF1664)
DUF4201	PF13870.1	gi|479325999|ref|YP_007866054.1|	-	0.01	15.3	1.0	0.082	12.3	0.9	1.7	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4201)
AAA_27	PF13514.1	gi|479325999|ref|YP_007866054.1|	-	0.011	13.4	0.3	0.018	12.8	0.2	1.2	1	0	0	1	1	1	0	AAA	domain
HCR	PF07111.7	gi|479325999|ref|YP_007866054.1|	-	0.011	13.7	0.3	0.015	13.3	0.2	1.1	1	0	0	1	1	1	0	Alpha	helical	coiled-coil	rod	protein	(HCR)
Atg14	PF10186.4	gi|479325999|ref|YP_007866054.1|	-	0.012	14.6	0.8	0.035	13.0	0.6	1.7	1	1	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
Lge1	PF11488.3	gi|479325999|ref|YP_007866054.1|	-	0.013	15.7	0.6	2.7	8.2	0.1	2.3	1	1	1	2	2	2	0	Transcriptional	regulatory	protein	LGE1
Prefoldin	PF02996.12	gi|479325999|ref|YP_007866054.1|	-	0.013	15.1	2.9	1.6	8.4	0.4	3.0	1	1	2	3	3	3	0	Prefoldin	subunit
MAD	PF05557.8	gi|479325999|ref|YP_007866054.1|	-	0.014	13.5	0.2	0.022	12.9	0.2	1.2	1	0	0	1	1	1	0	Mitotic	checkpoint	protein
DivIVA	PF05103.8	gi|479325999|ref|YP_007866054.1|	-	0.014	15.4	2.0	6.1	6.8	0.2	2.7	1	1	2	3	3	3	0	DivIVA	protein
Mnd1	PF03962.10	gi|479325999|ref|YP_007866054.1|	-	0.015	14.9	0.1	0.024	14.3	0.1	1.2	1	0	0	1	1	1	0	Mnd1	family
bZIP_1	PF00170.16	gi|479325999|ref|YP_007866054.1|	-	0.016	15.1	4.1	13	5.8	0.1	3.1	1	1	2	3	3	3	0	bZIP	transcription	factor
MbeD_MobD	PF04899.7	gi|479325999|ref|YP_007866054.1|	-	0.016	15.0	5.9	0.46	10.4	1.1	3.8	2	1	1	3	3	2	0	MbeD/MobD	like
Laminin_I	PF06008.9	gi|479325999|ref|YP_007866054.1|	-	0.019	14.3	7.2	0.039	13.2	4.9	1.5	1	1	0	1	1	1	0	Laminin	Domain	I
DUF3584	PF12128.3	gi|479325999|ref|YP_007866054.1|	-	0.019	12.3	0.1	0.026	11.9	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
Spc24	PF08286.6	gi|479325999|ref|YP_007866054.1|	-	0.019	14.6	5.6	0.91	9.2	0.1	2.5	1	1	1	2	2	2	0	Spc24	subunit	of	Ndc80
TPR_MLP1_2	PF07926.7	gi|479325999|ref|YP_007866054.1|	-	0.02	14.6	4.0	0.12	12.1	2.8	2.0	1	1	0	1	1	1	0	TPR/MLP1/MLP2-like	protein
DUF4200	PF13863.1	gi|479325999|ref|YP_007866054.1|	-	0.021	14.7	0.2	86	3.1	0.0	2.8	1	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4200)
Uds1	PF15456.1	gi|479325999|ref|YP_007866054.1|	-	0.022	14.7	0.9	0.32	10.9	0.6	2.1	1	1	0	1	1	1	0	Up-regulated	During	Septation
BicD	PF09730.4	gi|479325999|ref|YP_007866054.1|	-	0.023	13.1	1.1	0.03	12.7	0.7	1.1	1	0	0	1	1	1	0	Microtubule-associated	protein	Bicaudal-D
Not3	PF04065.10	gi|479325999|ref|YP_007866054.1|	-	0.024	13.9	0.3	0.044	13.0	0.2	1.4	1	1	0	1	1	1	0	Not1	N-terminal	domain,	CCR4-Not	complex	component
Nsp1_C	PF05064.8	gi|479325999|ref|YP_007866054.1|	-	0.025	14.2	2.7	0.089	12.4	1.9	1.7	1	1	0	1	1	1	0	Nsp1-like	C-terminal	region
Med9	PF07544.8	gi|479325999|ref|YP_007866054.1|	-	0.025	14.2	0.2	0.14	11.9	0.1	2.0	1	1	1	2	2	2	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
Snapin_Pallidin	PF14712.1	gi|479325999|ref|YP_007866054.1|	-	0.026	14.8	4.4	0.8	10.0	1.3	2.4	1	1	1	2	2	2	0	Snapin/Pallidin
DUF812	PF05667.6	gi|479325999|ref|YP_007866054.1|	-	0.026	13.0	2.1	0.069	11.6	1.5	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF812)
HALZ	PF02183.13	gi|479325999|ref|YP_007866054.1|	-	0.034	13.8	1.9	16	5.2	0.1	3.6	2	1	2	4	4	4	0	Homeobox	associated	leucine	zipper
HOOK	PF05622.7	gi|479325999|ref|YP_007866054.1|	-	0.035	11.9	0.1	0.05	11.4	0.1	1.1	1	0	0	1	1	1	0	HOOK	protein
DUF1202	PF06717.6	gi|479325999|ref|YP_007866054.1|	-	0.036	13.3	1.3	0.18	11.0	0.2	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1202)
HsbA	PF12296.3	gi|479325999|ref|YP_007866054.1|	-	0.038	13.8	13.3	0.44	10.4	3.2	3.2	1	1	1	2	2	2	0	Hydrophobic	surface	binding	protein	A
DUF1206	PF06724.6	gi|479325999|ref|YP_007866054.1|	-	0.042	13.5	0.7	0.042	13.5	0.5	1.8	2	0	0	2	2	1	0	Domain	of	Unknown	Function	(DUF1206)
Lzipper-MIP1	PF14389.1	gi|479325999|ref|YP_007866054.1|	-	0.043	13.9	1.4	0.96	9.6	0.1	2.5	1	1	2	3	3	3	0	Leucine-zipper	of	ternary	complex	factor	MIP1
FliJ	PF02050.11	gi|479325999|ref|YP_007866054.1|	-	0.045	13.8	0.2	0.18	11.8	0.2	1.8	1	1	1	2	2	2	0	Flagellar	FliJ	protein
Sec2p	PF06428.6	gi|479325999|ref|YP_007866054.1|	-	0.05	13.4	2.9	0.98	9.3	0.9	2.6	1	1	1	2	2	2	0	GDP/GTP	exchange	factor	Sec2p
DUF4618	PF15397.1	gi|479325999|ref|YP_007866054.1|	-	0.056	12.7	3.6	0.35	10.1	2.5	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4618)
DUF641	PF04859.7	gi|479325999|ref|YP_007866054.1|	-	0.06	13.1	0.3	7.6	6.2	0.0	2.2	1	1	1	2	2	2	0	Plant	protein	of	unknown	function	(DUF641)
COG2	PF06148.6	gi|479325999|ref|YP_007866054.1|	-	0.081	12.8	2.4	1	9.2	0.2	2.2	1	1	1	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
CALCOCO1	PF07888.6	gi|479325999|ref|YP_007866054.1|	-	0.082	11.1	0.3	0.12	10.5	0.2	1.2	1	0	0	1	1	1	0	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
EMP24_GP25L	PF01105.19	gi|479325999|ref|YP_007866054.1|	-	0.09	12.4	1.2	1.8	8.2	0.8	2.7	1	1	0	1	1	1	0	emp24/gp25L/p24	family/GOLD
LPP	PF04728.8	gi|479325999|ref|YP_007866054.1|	-	0.092	12.5	9.6	1.4	8.7	0.4	3.5	1	1	2	3	3	3	0	Lipoprotein	leucine-zipper
RmuC	PF02646.11	gi|479325999|ref|YP_007866054.1|	-	0.1	11.4	6.0	0.59	8.9	1.6	2.2	1	1	1	2	2	2	0	RmuC	family
Allexi_40kDa	PF05549.6	gi|479325999|ref|YP_007866054.1|	-	0.1	11.8	4.0	0.16	11.1	2.8	1.3	1	0	0	1	1	1	0	Allexivirus	40kDa	protein
Fmp27_WPPW	PF10359.4	gi|479325999|ref|YP_007866054.1|	-	0.1	10.9	0.3	0.16	10.3	0.2	1.2	1	0	0	1	1	1	0	RNA	pol	II	promoter	Fmp27	protein	domain
LXG	PF04740.7	gi|479325999|ref|YP_007866054.1|	-	0.11	12.2	2.6	0.32	10.7	1.8	1.6	1	1	0	1	1	1	0	LXG	domain	of	WXG	superfamily
AIP3	PF03915.8	gi|479325999|ref|YP_007866054.1|	-	0.12	11.2	0.8	0.17	10.7	0.5	1.1	1	0	0	1	1	1	0	Actin	interacting	protein	3
DASH_Dad3	PF08656.5	gi|479325999|ref|YP_007866054.1|	-	0.17	11.5	9.1	1.9	8.2	0.6	3.8	1	1	2	3	3	3	0	DASH	complex	subunit	Dad3
LURAP	PF14854.1	gi|479325999|ref|YP_007866054.1|	-	0.17	11.5	3.3	0.78	9.4	1.3	2.1	1	1	1	2	2	2	0	Leucine	rich	adaptor	protein
K-box	PF01486.12	gi|479325999|ref|YP_007866054.1|	-	0.19	11.5	1.6	8.1	6.3	0.0	2.8	1	1	1	2	2	2	0	K-box	region
HR1	PF02185.11	gi|479325999|ref|YP_007866054.1|	-	0.19	11.5	2.6	0.73	9.6	0.4	2.6	1	1	1	2	2	2	0	Hr1	repeat
DUF2594	PF10769.4	gi|479325999|ref|YP_007866054.1|	-	0.19	11.8	3.3	5.2	7.2	0.1	3.0	1	1	1	3	3	2	0	Protein	of	unknown	function	(DUF2594)
V-SNARE	PF05008.10	gi|479325999|ref|YP_007866054.1|	-	0.2	11.8	0.4	0.56	10.3	0.2	1.7	1	1	1	2	2	2	0	Vesicle	transport	v-SNARE	protein	N-terminus
DASH_Duo1	PF08651.5	gi|479325999|ref|YP_007866054.1|	-	0.2	11.2	5.7	0.8	9.3	0.8	2.6	1	1	0	2	2	2	0	DASH	complex	subunit	Duo1
Cluap1	PF10234.4	gi|479325999|ref|YP_007866054.1|	-	0.21	10.7	1.4	6.5	5.8	0.1	2.0	1	1	1	2	2	2	0	Clusterin-associated	protein-1
Spc42p	PF11544.3	gi|479325999|ref|YP_007866054.1|	-	0.26	11.2	1.5	14	5.6	0.2	2.7	1	1	2	3	3	2	0	Spindle	pole	body	component	Spc42p
Macoilin	PF09726.4	gi|479325999|ref|YP_007866054.1|	-	0.28	9.4	1.7	0.37	9.0	1.2	1.1	1	0	0	1	1	1	0	Transmembrane	protein
Sec34	PF04136.10	gi|479325999|ref|YP_007866054.1|	-	0.28	10.8	3.3	0.46	10.1	0.4	2.3	2	1	1	3	3	2	0	Sec34-like	family
Cortex-I_coil	PF09304.5	gi|479325999|ref|YP_007866054.1|	-	0.29	11.1	0.9	0.62	10.1	0.4	1.6	1	1	1	2	2	2	0	Cortexillin	I,	coiled	coil
DUF904	PF06005.7	gi|479325999|ref|YP_007866054.1|	-	0.29	11.4	5.2	22	5.4	1.2	2.6	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF904)
Med4	PF10018.4	gi|479325999|ref|YP_007866054.1|	-	0.39	10.1	2.2	1.8	7.9	1.1	1.9	1	1	1	2	2	2	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
Lectin_N	PF03954.9	gi|479325999|ref|YP_007866054.1|	-	0.54	9.6	8.0	14	5.1	5.6	2.4	1	1	0	1	1	1	0	Hepatic	lectin,	N-terminal	domain
Vps5	PF09325.5	gi|479325999|ref|YP_007866054.1|	-	0.58	9.3	5.1	1.1	8.4	2.1	1.9	1	1	1	2	2	2	0	Vps5	C	terminal	like
WXG100	PF06013.7	gi|479325999|ref|YP_007866054.1|	-	0.71	9.9	2.3	12	6.0	0.9	2.9	1	1	1	2	2	2	0	Proteins	of	100	residues	with	WXG
Lipoprotein_7	PF01540.11	gi|479325999|ref|YP_007866054.1|	-	0.79	8.7	4.4	0.18	10.8	0.8	1.5	2	0	0	2	2	1	0	Adhesin	lipoprotein
Syntaxin	PF00804.20	gi|479325999|ref|YP_007866054.1|	-	0.99	9.6	4.6	8.2	6.6	3.2	2.1	1	1	0	1	1	1	0	Syntaxin
Rifin_STEVOR	PF02009.11	gi|479325999|ref|YP_007866054.1|	-	2.1	7.9	7.8	3.6	7.1	5.4	1.4	1	0	0	1	1	1	0	Rifin/stevor	family
XhlA	PF10779.4	gi|479325999|ref|YP_007866054.1|	-	4.8	7.1	9.6	1.1	9.2	0.4	2.9	1	1	1	2	2	2	0	Haemolysin	XhlA
Syntaxin_2	PF14523.1	gi|479325999|ref|YP_007866054.1|	-	5	7.2	12.8	11	6.1	4.2	2.4	1	1	1	2	2	2	0	Syntaxin-like	protein
Mitofilin	PF09731.4	gi|479325999|ref|YP_007866054.1|	-	9.8	4.6	8.3	3.2	6.2	1.3	2.0	1	1	1	2	2	2	0	Mitochondrial	inner	membrane	protein
SSV1_ORF_D-335	PF07935.6	gi|479326001|ref|YP_007866056.1|	-	5e-26	90.2	0.1	6.1e-26	89.9	0.1	1.0	1	0	0	1	1	1	1	ORF	D-335-like	protein
Glycos_transf_1	PF00534.15	gi|479326002|ref|YP_007866057.1|	-	9.3e-23	80.5	0.3	3.7e-22	78.5	0.0	2.1	2	1	1	3	3	3	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|479326002|ref|YP_007866057.1|	-	7.5e-16	58.5	0.0	1.6e-15	57.4	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|479326002|ref|YP_007866057.1|	-	0.0021	18.2	0.0	0.0049	17.1	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
DNA_pol_E_B	PF04042.11	gi|479326002|ref|YP_007866057.1|	-	0.1	11.8	0.0	0.17	11.0	0.0	1.3	1	0	0	1	1	1	0	DNA	polymerase	alpha/epsilon	subunit	B
HTH_3	PF01381.17	gi|479326003|ref|YP_007866058.1|	-	4.2e-10	39.3	0.1	8.2e-09	35.1	0.1	2.3	2	0	0	2	2	2	1	Helix-turn-helix
HTH_19	PF12844.2	gi|479326003|ref|YP_007866058.1|	-	1.3e-07	31.5	0.2	5.4e-07	29.5	0.1	2.0	1	1	0	1	1	1	1	Helix-turn-helix	domain
HTH_31	PF13560.1	gi|479326003|ref|YP_007866058.1|	-	7.1e-05	22.9	0.1	0.00013	22.1	0.1	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_37	PF13744.1	gi|479326003|ref|YP_007866058.1|	-	0.0033	17.1	0.0	0.12	12.1	0.0	2.2	2	0	0	2	2	2	1	Helix-turn-helix	domain
NAC	PF01849.13	gi|479326004|ref|YP_007866059.1|	-	6e-09	35.3	2.1	1.7e-08	33.8	1.5	1.7	1	0	0	1	1	1	1	NAC	domain
UBA	PF00627.26	gi|479326004|ref|YP_007866059.1|	-	0.00017	21.2	0.2	0.00053	19.7	0.0	1.9	2	0	0	2	2	2	1	UBA/TS-N	domain
potato_inhibit	PF00280.13	gi|479326004|ref|YP_007866059.1|	-	0.0084	16.2	1.0	0.56	10.3	0.0	2.3	2	0	0	2	2	2	1	Potato	inhibitor	I	family
TMA7	PF09072.5	gi|479326004|ref|YP_007866059.1|	-	0.42	11.1	2.3	0.8	10.2	1.6	1.5	1	0	0	1	1	1	0	Translation	machinery	associated	TMA7
RNA_pol_Rpb1_5	PF04998.12	gi|479326004|ref|YP_007866059.1|	-	1.4	8.1	4.6	1.7	7.8	3.2	1.1	1	0	0	1	1	1	0	RNA	polymerase	Rpb1,	domain	5
Beta-Casp	PF10996.3	gi|479326005|ref|YP_007866060.1|	-	4.1e-23	81.7	0.0	8.4e-23	80.6	0.0	1.5	1	0	0	1	1	1	1	Beta-Casp	domain
Lactamase_B	PF00753.22	gi|479326005|ref|YP_007866060.1|	-	1.4e-15	57.4	0.0	2.2e-15	56.8	0.0	1.3	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
RMMBL	PF07521.7	gi|479326005|ref|YP_007866060.1|	-	4.5e-11	42.3	0.1	9.6e-11	41.3	0.0	1.5	1	0	0	1	1	1	1	RNA-metabolising	metallo-beta-lactamase
Lactamase_B_2	PF12706.2	gi|479326005|ref|YP_007866060.1|	-	2.8e-10	40.0	0.0	5.5e-10	39.1	0.0	1.4	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
PDEase_II	PF02112.10	gi|479326005|ref|YP_007866060.1|	-	0.00022	20.2	0.0	0.00033	19.6	0.0	1.3	1	0	0	1	1	1	1	cAMP	phosphodiesterases	class-II
CheB_methylest	PF01339.12	gi|479326005|ref|YP_007866060.1|	-	0.04	13.3	0.0	0.074	12.4	0.0	1.3	1	0	0	1	1	1	0	CheB	methylesterase
tRNA-Thr_ED	PF08915.6	gi|479326006|ref|YP_007866061.1|	-	1.7e-53	180.2	2.2	2.3e-53	179.8	0.2	2.0	2	0	0	2	2	2	1	Archaea-specific	editing	domain	of	threonyl-tRNA	synthetase
HGTP_anticodon	PF03129.15	gi|479326006|ref|YP_007866061.1|	-	3.6e-24	84.5	1.0	7.1e-24	83.5	0.7	1.5	1	0	0	1	1	1	1	Anticodon	binding	domain
Glycoamylase	PF10091.4	gi|479326006|ref|YP_007866061.1|	-	0.0032	16.5	0.0	0.0053	15.8	0.0	1.2	1	0	0	1	1	1	1	Putative	glucoamylase
HGTP_anticodon2	PF12745.2	gi|479326006|ref|YP_007866061.1|	-	0.0048	16.0	0.8	0.0086	15.2	0.6	1.3	1	0	0	1	1	1	1	Anticodon	binding	domain	of	tRNAs
GHMP_kinases_N	PF00288.21	gi|479326007|ref|YP_007866062.1|	-	9.9e-14	51.1	0.0	2e-13	50.2	0.0	1.5	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|479326007|ref|YP_007866062.1|	-	4.1e-09	36.5	0.1	9.6e-09	35.3	0.1	1.6	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
CheX	PF13690.1	gi|479326007|ref|YP_007866062.1|	-	0.098	12.5	0.0	0.27	11.1	0.0	1.7	1	0	0	1	1	1	0	Chemotaxis	phosphatase	CheX
SIS	PF01380.17	gi|479326008|ref|YP_007866063.1|	-	2.9e-42	143.3	1.3	8.1e-25	86.9	0.2	2.5	2	0	0	2	2	2	2	SIS	domain
GATase_6	PF13522.1	gi|479326008|ref|YP_007866063.1|	-	1.6e-23	83.1	0.0	4.6e-23	81.6	0.0	1.8	2	0	0	2	2	2	1	Glutamine	amidotransferase	domain
GATase_2	PF00310.16	gi|479326008|ref|YP_007866063.1|	-	1.6e-21	76.4	0.6	8.2e-16	57.6	0.1	2.5	1	1	1	2	2	2	2	Glutamine	amidotransferases	class-II
GATase_7	PF13537.1	gi|479326008|ref|YP_007866063.1|	-	1e-20	73.7	0.0	3.4e-20	72.0	0.0	1.9	2	0	0	2	2	2	1	Glutamine	amidotransferase	domain
GATase_4	PF13230.1	gi|479326008|ref|YP_007866063.1|	-	3.1e-06	26.0	0.0	5.9e-06	25.1	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
SIS_2	PF13580.1	gi|479326008|ref|YP_007866063.1|	-	5.7e-06	26.1	0.7	7.3e-05	22.5	0.0	2.7	3	0	0	3	3	3	1	SIS	domain
Hexapep	PF00132.19	gi|479326009|ref|YP_007866064.1|	-	3.7e-15	54.6	8.3	9.9e-07	28.0	0.2	5.1	2	1	3	5	5	5	4	Bacterial	transferase	hexapeptide	(six	repeats)
NTP_transferase	PF00483.18	gi|479326009|ref|YP_007866064.1|	-	2.7e-14	53.0	0.4	1.3e-12	47.5	0.3	2.1	1	1	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|479326009|ref|YP_007866064.1|	-	3.3e-09	37.0	0.0	4e-09	36.7	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep_2	PF14602.1	gi|479326009|ref|YP_007866064.1|	-	0.0017	17.8	4.4	4.3	6.9	0.4	4.2	4	1	0	4	4	4	2	Hexapeptide	repeat	of	succinyl-transferase
Glycos_transf_2	PF00535.21	gi|479326009|ref|YP_007866064.1|	-	0.012	15.2	0.1	0.02	14.5	0.1	1.3	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
Fucokinase	PF07959.7	gi|479326009|ref|YP_007866064.1|	-	0.029	12.9	0.2	0.11	10.9	0.0	1.8	1	1	1	2	2	2	0	L-fucokinase
Rifin_STEVOR	PF02009.11	gi|479326010|ref|YP_007866065.1|	-	1.5e-06	28.0	7.1	2.6e-06	27.2	4.9	1.4	1	0	0	1	1	1	1	Rifin/stevor	family
RAP1	PF07218.6	gi|479326010|ref|YP_007866065.1|	-	2.1	6.3	10.8	3.4	5.6	7.5	1.3	1	0	0	1	1	1	0	Rhoptry-associated	protein	1	(RAP-1)
OCD_Mu_crystall	PF02423.10	gi|479326011|ref|YP_007866066.1|	-	1.7e-45	155.1	0.1	2e-45	154.9	0.0	1.1	1	0	0	1	1	1	1	Ornithine	cyclodeaminase/mu-crystallin	family
2-Hacid_dh_C	PF02826.14	gi|479326011|ref|YP_007866066.1|	-	0.00021	20.4	0.1	0.00037	19.6	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Shikimate_DH	PF01488.15	gi|479326011|ref|YP_007866066.1|	-	0.00032	20.8	0.1	0.00051	20.1	0.0	1.4	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
Cob_adeno_trans	PF01923.13	gi|479326012|ref|YP_007866067.1|	-	2.8e-50	170.3	0.0	3.1e-50	170.1	0.0	1.0	1	0	0	1	1	1	1	Cobalamin	adenosyltransferase
Na_H_Exchanger	PF00999.16	gi|479326013|ref|YP_007866068.1|	-	3.5e-34	117.9	48.0	4.8e-34	117.5	33.3	1.1	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
CBS	PF00571.23	gi|479326013|ref|YP_007866068.1|	-	1.5e-06	27.8	3.1	3.1e-05	23.6	0.0	2.8	3	0	0	3	3	3	2	CBS	domain
Phage_integrase	PF00589.17	gi|479326014|ref|YP_007866069.1|	-	5.1e-37	127.1	2.7	8.5e-37	126.4	1.2	1.7	2	0	0	2	2	2	1	Phage	integrase	family
Phage_int_SAM_4	PF13495.1	gi|479326014|ref|YP_007866069.1|	-	7.2e-13	48.6	0.1	1e-07	32.1	0.0	2.7	2	1	1	3	3	3	2	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_1	PF02899.12	gi|479326014|ref|YP_007866069.1|	-	1.7e-06	28.0	0.0	6.2e-06	26.2	0.0	2.0	1	1	0	1	1	1	1	Phage	integrase,	N-terminal	SAM-like	domain
NUMOD3	PF07460.6	gi|479326014|ref|YP_007866069.1|	-	0.00094	19.0	1.4	0.0013	18.5	0.2	1.8	2	0	0	2	2	2	1	NUMOD3	motif	(2	copies)
HCV_NS5a_C	PF12941.2	gi|479326014|ref|YP_007866069.1|	-	0.14	11.6	0.1	0.23	11.0	0.1	1.2	1	0	0	1	1	1	0	HCV	NS5a	protein	C-terminal	region
HTH_37	PF13744.1	gi|479326014|ref|YP_007866069.1|	-	0.14	11.9	1.8	0.24	11.2	0.0	2.3	4	0	0	4	4	4	0	Helix-turn-helix	domain
Surf_Ag_VNR	PF07244.10	gi|479326014|ref|YP_007866069.1|	-	0.16	12.4	1.4	1.2	9.5	1.0	2.5	1	1	0	1	1	1	0	Surface	antigen	variable	number	repeat
Radical_SAM	PF04055.16	gi|479326015|ref|YP_007866070.1|	-	9.2e-16	58.4	0.1	1.7e-14	54.3	0.0	2.0	1	1	1	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|479326015|ref|YP_007866070.1|	-	1.8e-09	37.8	0.0	4.2e-09	36.6	0.0	1.7	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|479326015|ref|YP_007866070.1|	-	3.5e-09	36.6	0.0	1.6e-08	34.6	0.0	2.0	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
TBPIP_N	PF15517.1	gi|479326015|ref|YP_007866070.1|	-	0.0086	15.7	0.0	0.02	14.5	0.0	1.6	1	0	0	1	1	1	1	TBP-interacting	protein	N-terminus
SPASM	PF13186.1	gi|479326015|ref|YP_007866070.1|	-	0.023	15.0	0.1	0.11	12.8	0.0	2.1	2	0	0	2	2	2	0	Iron-sulfur	cluster-binding	domain
Hexapep	PF00132.19	gi|479326016|ref|YP_007866071.1|	-	7.8e-20	69.4	15.4	7e-07	28.4	1.4	4.7	3	1	2	5	5	5	4	Bacterial	transferase	hexapeptide	(six	repeats)
Hexapep_2	PF14602.1	gi|479326016|ref|YP_007866071.1|	-	1.2e-06	27.9	9.0	0.00031	20.2	0.9	3.9	3	1	1	4	4	4	2	Hexapeptide	repeat	of	succinyl-transferase
EspA	PF03433.8	gi|479326016|ref|YP_007866071.1|	-	0.13	11.6	0.0	0.24	10.8	0.0	1.3	1	0	0	1	1	1	0	EspA-like	secreted	protein
Nol1_Nop2_Fmu	PF01189.12	gi|479326017|ref|YP_007866072.1|	-	2e-30	106.1	0.1	2.2e-28	99.4	0.0	2.8	2	1	1	3	3	3	1	NOL1/NOP2/sun	family
Methyltransf_31	PF13847.1	gi|479326017|ref|YP_007866072.1|	-	7.6e-08	32.0	0.0	1.2e-07	31.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|479326017|ref|YP_007866072.1|	-	7.2e-06	26.5	0.0	1.7e-05	25.3	0.0	1.6	2	0	0	2	2	2	1	Methyltransferase	domain
MTS	PF05175.9	gi|479326017|ref|YP_007866072.1|	-	0.0004	19.8	0.0	0.00064	19.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_26	PF13659.1	gi|479326017|ref|YP_007866072.1|	-	0.0013	18.7	0.0	0.0019	18.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
DUF2431	PF10354.4	gi|479326017|ref|YP_007866072.1|	-	0.0066	16.4	0.0	0.014	15.3	0.0	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF2431)
PUA	PF01472.15	gi|479326017|ref|YP_007866072.1|	-	0.012	15.3	0.0	0.023	14.3	0.0	1.5	1	0	0	1	1	1	0	PUA	domain
Methyltransf_5	PF01795.14	gi|479326017|ref|YP_007866072.1|	-	0.013	14.8	0.0	0.026	13.8	0.0	1.4	1	0	0	1	1	1	0	MraW	methylase	family
GHMP_kinases_N	PF00288.21	gi|479326018|ref|YP_007866073.1|	-	0.088	12.8	0.0	0.15	12.1	0.0	1.4	1	0	0	1	1	1	0	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|479326018|ref|YP_007866073.1|	-	0.1	12.8	0.0	0.18	12.0	0.0	1.3	1	0	0	1	1	1	0	GHMP	kinases	C	terminal
AMP-binding	PF00501.23	gi|479326019|ref|YP_007866074.1|	-	1.6e-68	231.0	0.0	1.8e-68	230.8	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|479326019|ref|YP_007866074.1|	-	8.1e-07	29.9	0.1	1.6e-06	28.9	0.0	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
Thioredoxin	PF00085.15	gi|479326020|ref|YP_007866075.1|	-	5.4e-28	96.7	0.1	7.3e-28	96.2	0.1	1.2	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_8	PF13905.1	gi|479326020|ref|YP_007866075.1|	-	6.2e-07	29.4	2.0	9.1e-05	22.5	0.1	2.5	2	1	1	3	3	3	2	Thioredoxin-like
Thioredoxin_2	PF13098.1	gi|479326020|ref|YP_007866075.1|	-	2.6e-06	27.6	0.2	1.5e-05	25.1	0.1	2.0	1	1	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin_3	PF13192.1	gi|479326020|ref|YP_007866075.1|	-	3.7e-06	26.6	0.3	1.4e-05	24.8	0.0	2.0	1	1	0	2	2	2	1	Thioredoxin	domain
Thioredoxin_6	PF13848.1	gi|479326020|ref|YP_007866075.1|	-	0.00019	21.3	1.5	0.025	14.3	0.2	2.1	1	1	1	2	2	2	2	Thioredoxin-like	domain
AhpC-TSA	PF00578.16	gi|479326020|ref|YP_007866075.1|	-	0.00058	19.5	1.4	0.17	11.5	0.3	2.4	1	1	1	2	2	2	2	AhpC/TSA	family
HyaE	PF07449.6	gi|479326020|ref|YP_007866075.1|	-	0.0023	17.8	0.0	0.023	14.6	0.0	2.1	2	0	0	2	2	2	1	Hydrogenase-1	expression	protein	HyaE
Redoxin	PF08534.5	gi|479326020|ref|YP_007866075.1|	-	0.0049	16.4	0.9	0.017	14.6	0.3	1.8	1	1	1	2	2	2	1	Redoxin
Thioredoxin_7	PF13899.1	gi|479326020|ref|YP_007866075.1|	-	0.0053	16.7	0.1	0.0098	15.8	0.0	1.5	1	0	0	1	1	1	1	Thioredoxin-like
CIDE-N	PF02017.10	gi|479326020|ref|YP_007866075.1|	-	0.032	14.0	0.2	0.1	12.3	0.1	1.8	2	0	0	2	2	2	0	CIDE-N	domain
DIM1	PF02966.11	gi|479326020|ref|YP_007866075.1|	-	0.071	12.6	0.1	0.14	11.6	0.0	1.5	2	0	0	2	2	2	0	Mitosis	protein	DIM1
RHH_1	PF01402.16	gi|479326020|ref|YP_007866075.1|	-	0.073	12.9	0.3	0.23	11.4	0.2	1.9	1	0	0	1	1	1	0	Ribbon-helix-helix	protein,	copG	family
BAG	PF02179.11	gi|479326020|ref|YP_007866075.1|	-	0.12	12.4	0.7	0.26	11.4	0.5	1.6	1	0	0	1	1	1	0	BAG	domain
Thioredoxin_9	PF14595.1	gi|479326020|ref|YP_007866075.1|	-	0.14	11.7	0.2	0.26	10.8	0.1	1.5	1	1	0	1	1	1	0	Thioredoxin
ABC_tran	PF00005.22	gi|479326021|ref|YP_007866076.1|	-	1.5e-23	83.6	0.1	2.1e-23	83.1	0.1	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_23	PF13476.1	gi|479326021|ref|YP_007866076.1|	-	3.2e-08	34.1	3.9	5.6e-08	33.3	2.7	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_21	PF13304.1	gi|479326021|ref|YP_007866076.1|	-	7.3e-08	32.7	4.6	7.6e-06	26.0	0.9	2.2	1	1	1	2	2	2	2	AAA	domain
AAA_29	PF13555.1	gi|479326021|ref|YP_007866076.1|	-	3.8e-07	29.5	0.1	7.4e-07	28.6	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
T2SE	PF00437.15	gi|479326021|ref|YP_007866076.1|	-	4.8e-05	22.3	0.0	8.7e-05	21.5	0.0	1.4	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_22	PF13401.1	gi|479326021|ref|YP_007866076.1|	-	0.00054	20.0	0.5	0.0013	18.8	0.3	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|479326021|ref|YP_007866076.1|	-	0.00067	20.4	0.7	0.001	19.8	0.5	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|479326021|ref|YP_007866076.1|	-	0.0013	18.4	0.0	0.0023	17.6	0.0	1.4	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_10	PF12846.2	gi|479326021|ref|YP_007866076.1|	-	0.0021	17.5	0.1	0.024	14.0	0.1	2.0	2	0	0	2	2	2	1	AAA-like	domain
MobB	PF03205.9	gi|479326021|ref|YP_007866076.1|	-	0.0026	17.4	0.5	0.023	14.3	0.1	2.2	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_14	PF13173.1	gi|479326021|ref|YP_007866076.1|	-	0.0029	17.4	0.9	0.021	14.7	0.6	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|479326021|ref|YP_007866076.1|	-	0.003	17.5	0.0	0.0037	17.2	0.0	1.3	1	0	0	1	1	1	1	AAA	ATPase	domain
NB-ARC	PF00931.17	gi|479326021|ref|YP_007866076.1|	-	0.0046	15.8	0.7	0.015	14.2	0.0	1.8	2	0	0	2	2	2	1	NB-ARC	domain
DUF258	PF03193.11	gi|479326021|ref|YP_007866076.1|	-	0.005	16.0	0.0	0.0071	15.5	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
SMC_N	PF02463.14	gi|479326021|ref|YP_007866076.1|	-	0.0053	16.0	2.7	0.0059	15.8	0.6	1.8	1	1	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
NTPase_1	PF03266.10	gi|479326021|ref|YP_007866076.1|	-	0.0064	16.2	1.0	0.029	14.0	0.1	2.2	2	1	0	2	2	2	1	NTPase
KAP_NTPase	PF07693.9	gi|479326021|ref|YP_007866076.1|	-	0.0064	15.5	0.1	0.0074	15.3	0.0	1.1	1	0	0	1	1	1	1	KAP	family	P-loop	domain
AAA_15	PF13175.1	gi|479326021|ref|YP_007866076.1|	-	0.0068	15.4	13.0	0.028	13.4	9.0	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_18	PF13238.1	gi|479326021|ref|YP_007866076.1|	-	0.0074	16.5	3.8	0.022	15.0	2.6	1.9	1	1	0	1	1	1	1	AAA	domain
NACHT	PF05729.7	gi|479326021|ref|YP_007866076.1|	-	0.013	15.1	0.1	0.02	14.5	0.1	1.3	1	0	0	1	1	1	0	NACHT	domain
AAA_30	PF13604.1	gi|479326021|ref|YP_007866076.1|	-	0.017	14.6	0.0	0.031	13.8	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
ABC_ATPase	PF09818.4	gi|479326021|ref|YP_007866076.1|	-	0.023	13.3	0.6	0.04	12.5	0.4	1.3	1	0	0	1	1	1	0	Predicted	ATPase	of	the	ABC	class
Arch_ATPase	PF01637.13	gi|479326021|ref|YP_007866076.1|	-	0.025	14.2	1.0	0.054	13.1	0.1	1.7	1	1	0	1	1	1	0	Archaeal	ATPase
Zeta_toxin	PF06414.7	gi|479326021|ref|YP_007866076.1|	-	0.026	13.6	0.1	0.28	10.2	0.0	2.0	2	0	0	2	2	2	0	Zeta	toxin
MMR_HSR1	PF01926.18	gi|479326021|ref|YP_007866076.1|	-	0.029	14.3	2.4	0.041	13.8	1.6	1.6	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
Miro	PF08477.8	gi|479326021|ref|YP_007866076.1|	-	0.033	14.6	0.2	0.09	13.2	0.1	1.9	1	1	1	2	2	2	0	Miro-like	protein
AAA_33	PF13671.1	gi|479326021|ref|YP_007866076.1|	-	0.035	14.0	0.0	0.11	12.3	0.0	1.8	1	1	0	1	1	1	0	AAA	domain
Thioredoxin_8	PF13905.1	gi|479326021|ref|YP_007866076.1|	-	0.037	14.1	0.5	0.12	12.5	0.2	1.9	1	1	1	2	2	2	0	Thioredoxin-like
DUF927	PF06048.6	gi|479326021|ref|YP_007866076.1|	-	0.06	12.6	0.0	0.54	9.4	0.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF927)
MutS_V	PF00488.16	gi|479326021|ref|YP_007866076.1|	-	0.081	12.3	0.0	0.18	11.1	0.0	1.5	1	0	0	1	1	1	0	MutS	domain	V
PRK	PF00485.13	gi|479326021|ref|YP_007866076.1|	-	0.094	12.2	0.2	0.12	11.9	0.1	1.5	1	1	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
FtsK_SpoIIIE	PF01580.13	gi|479326021|ref|YP_007866076.1|	-	0.12	11.8	0.0	0.19	11.1	0.0	1.3	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
Dynamin_N	PF00350.18	gi|479326021|ref|YP_007866076.1|	-	0.21	11.3	4.1	1.2	8.9	2.8	2.0	1	1	0	1	1	1	0	Dynamin	family
Gln-synt_C	PF00120.19	gi|479326022|ref|YP_007866077.1|	-	2.8e-98	328.2	0.0	3.4e-98	327.9	0.0	1.1	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.14	gi|479326022|ref|YP_007866077.1|	-	7.6e-25	86.3	0.0	1.7e-24	85.1	0.0	1.6	1	0	0	1	1	1	1	Glutamine	synthetase,	beta-Grasp	domain
HTH_24	PF13412.1	gi|479326023|ref|YP_007866078.1|	-	4.9e-08	32.2	0.2	4.9e-08	32.2	0.1	2.8	3	0	0	3	3	3	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.17	gi|479326023|ref|YP_007866078.1|	-	1.7e-07	30.8	0.1	4.6e-07	29.4	0.0	1.7	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.2	gi|479326023|ref|YP_007866078.1|	-	7.4e-05	22.3	0.1	0.00016	21.2	0.0	1.5	1	0	0	1	1	1	1	MarR	family
HTH_Crp_2	PF13545.1	gi|479326023|ref|YP_007866078.1|	-	0.00072	19.3	0.0	0.0019	17.9	0.0	1.7	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
TrmB	PF01978.14	gi|479326023|ref|YP_007866078.1|	-	0.0013	18.3	0.9	0.0013	18.3	0.6	1.9	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_34	PF13601.1	gi|479326023|ref|YP_007866078.1|	-	0.011	15.6	0.1	0.039	13.9	0.1	1.9	2	0	0	2	2	1	0	Winged	helix	DNA-binding	domain
HTH_IclR	PF09339.5	gi|479326023|ref|YP_007866078.1|	-	0.016	14.7	0.0	0.029	13.9	0.0	1.4	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
TFIIE_alpha	PF02002.12	gi|479326023|ref|YP_007866078.1|	-	0.019	14.4	1.2	0.025	14.0	0.1	1.7	2	0	0	2	2	2	0	TFIIE	alpha	subunit
LysR_substrate	PF03466.15	gi|479326023|ref|YP_007866078.1|	-	0.041	12.9	0.0	0.08	12.0	0.0	1.4	1	0	0	1	1	1	0	LysR	substrate	binding	domain
Cdc6_C	PF09079.6	gi|479326023|ref|YP_007866078.1|	-	0.052	13.2	0.1	0.12	12.0	0.0	1.6	1	0	0	1	1	1	0	CDC6,	C	terminal
GntR	PF00392.16	gi|479326023|ref|YP_007866078.1|	-	0.053	12.9	0.2	0.12	11.7	0.1	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
Rio2_N	PF09202.6	gi|479326023|ref|YP_007866078.1|	-	0.063	13.3	0.1	0.18	11.9	0.0	1.8	1	0	0	1	1	1	0	Rio2,	N-terminal
FeoC	PF09012.5	gi|479326023|ref|YP_007866078.1|	-	0.092	12.4	0.3	2.8	7.7	0.1	2.4	2	0	0	2	2	2	0	FeoC	like	transcriptional	regulator
Rrf2	PF02082.15	gi|479326023|ref|YP_007866078.1|	-	0.1	12.7	0.2	0.19	11.8	0.1	1.4	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_27	PF13463.1	gi|479326023|ref|YP_007866078.1|	-	0.11	12.8	0.1	0.23	11.8	0.0	1.5	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_36	PF13730.1	gi|479326023|ref|YP_007866078.1|	-	1.9	8.6	5.3	0.84	9.8	0.1	2.9	3	1	1	4	4	3	0	Helix-turn-helix	domain
GTP_cyclohydroI	PF01227.17	gi|479326024|ref|YP_007866079.1|	-	4.6e-65	218.2	0.0	5.3e-65	218.0	0.0	1.0	1	0	0	1	1	1	1	GTP	cyclohydrolase	I
FlpD	PF02662.11	gi|479326024|ref|YP_007866079.1|	-	0.065	12.9	0.1	1.6	8.4	0.0	2.3	2	0	0	2	2	2	0	Methyl-viologen-reducing	hydrogenase,	delta	subunit
Peptidase_M24	PF00557.19	gi|479326025|ref|YP_007866080.1|	-	6.7e-67	225.0	1.0	9.4e-67	224.5	0.7	1.2	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.13	gi|479326025|ref|YP_007866080.1|	-	6e-10	39.7	0.0	1e-09	38.9	0.0	1.4	1	0	0	1	1	1	1	Creatinase/Prolidase	N-terminal	domain
Radical_SAM	PF04055.16	gi|479326026|ref|YP_007866081.1|	-	8.9e-27	94.2	0.3	1.4e-25	90.4	0.0	2.2	1	1	1	2	2	2	1	Radical	SAM	superfamily
Mob_synth_C	PF06463.8	gi|479326026|ref|YP_007866081.1|	-	1.2e-26	92.8	0.0	2e-26	92.1	0.0	1.3	1	0	0	1	1	1	1	Molybdenum	Cofactor	Synthesis	C
Fer4_12	PF13353.1	gi|479326026|ref|YP_007866081.1|	-	1.6e-08	34.7	0.1	1.6e-07	31.4	0.0	2.2	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|479326026|ref|YP_007866081.1|	-	1.2e-06	28.5	0.1	3.9e-06	26.8	0.0	1.9	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Lar_restr_allev	PF14354.1	gi|479326027|ref|YP_007866082.1|	-	0.0013	18.9	0.0	0.0018	18.4	0.0	1.2	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
Zn_Tnp_IS1595	PF12760.2	gi|479326027|ref|YP_007866082.1|	-	0.0051	16.5	2.2	0.015	15.1	1.8	1.6	1	1	1	2	2	2	2	Transposase	zinc-ribbon	domain
DNA_RNApol_7kD	PF03604.8	gi|479326027|ref|YP_007866082.1|	-	0.0056	16.1	1.8	0.13	11.7	0.1	2.5	2	0	0	2	2	2	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-ribbon_3	PF13248.1	gi|479326027|ref|YP_007866082.1|	-	0.0063	15.6	1.9	0.26	10.5	0.0	2.2	2	0	0	2	2	2	1	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|479326027|ref|YP_007866082.1|	-	0.007	15.6	0.4	0.29	10.5	0.0	2.2	2	0	0	2	2	2	1	TFIIB	zinc-binding
zinc-ribbons_6	PF07191.7	gi|479326027|ref|YP_007866082.1|	-	0.013	15.3	0.0	0.015	15.0	0.0	1.2	1	0	0	1	1	1	0	zinc-ribbons
zf-ISL3	PF14690.1	gi|479326027|ref|YP_007866082.1|	-	0.015	15.3	0.1	1.4	9.0	0.0	2.2	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zinc_ribbon_2	PF13240.1	gi|479326027|ref|YP_007866082.1|	-	0.016	14.6	0.9	1.8	8.1	0.0	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
Zn-ribbon_8	PF09723.5	gi|479326027|ref|YP_007866082.1|	-	0.016	15.1	1.0	0.35	10.8	0.1	2.2	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-C4_Topoisom	PF01396.14	gi|479326027|ref|YP_007866082.1|	-	0.025	14.0	0.6	3.1	7.3	0.0	2.2	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
zf-TFIIB	PF13453.1	gi|479326027|ref|YP_007866082.1|	-	0.028	13.6	0.2	4.5	6.5	0.0	2.1	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
GFA	PF04828.9	gi|479326027|ref|YP_007866082.1|	-	0.057	13.3	0.6	0.45	10.4	0.0	2.0	1	1	1	2	2	2	0	Glutathione-dependent	formaldehyde-activating	enzyme
Prok-RING_1	PF14446.1	gi|479326027|ref|YP_007866082.1|	-	0.06	13.0	0.3	5.4	6.8	0.0	2.2	2	0	0	2	2	2	0	Prokaryotic	RING	finger	family	1
zf-HIT	PF04438.11	gi|479326027|ref|YP_007866082.1|	-	0.06	13.0	6.0	0.73	9.5	1.0	2.1	2	0	0	2	2	2	0	HIT	zinc	finger
Ogr_Delta	PF04606.7	gi|479326027|ref|YP_007866082.1|	-	0.062	12.9	3.9	0.91	9.2	2.8	2.2	1	1	1	2	2	2	0	Ogr/Delta-like	zinc	finger
DUF2296	PF10058.4	gi|479326027|ref|YP_007866082.1|	-	0.063	13.0	4.4	0.65	9.7	3.0	2.1	1	1	0	1	1	1	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
Zn_ribbon_recom	PF13408.1	gi|479326027|ref|YP_007866082.1|	-	0.064	13.5	0.4	0.086	13.1	0.3	1.3	1	0	0	1	1	1	0	Recombinase	zinc	beta	ribbon	domain
DUF3797	PF12677.2	gi|479326027|ref|YP_007866082.1|	-	0.067	12.8	0.3	0.7	9.5	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3797)
DZR	PF12773.2	gi|479326027|ref|YP_007866082.1|	-	0.079	12.7	1.1	0.23	11.3	0.8	1.7	1	1	0	1	1	1	0	Double	zinc	ribbon
DUF329	PF03884.9	gi|479326027|ref|YP_007866082.1|	-	0.088	12.3	0.2	12	5.4	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF329)
DNA_ligase_ZBD	PF03119.11	gi|479326027|ref|YP_007866082.1|	-	0.092	12.4	1.6	0.39	10.4	0.0	2.1	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Rubredoxin	PF00301.15	gi|479326027|ref|YP_007866082.1|	-	0.13	12.1	0.2	3.7	7.4	0.0	2.1	2	0	0	2	2	2	0	Rubredoxin
zf-RING_3	PF14369.1	gi|479326027|ref|YP_007866082.1|	-	0.14	12.2	1.8	6.5	6.8	0.1	2.2	1	1	1	2	2	2	0	zinc-finger
UPF0547	PF10571.4	gi|479326027|ref|YP_007866082.1|	-	0.26	10.9	2.3	6.4	6.5	0.1	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zf-NADH-PPase	PF09297.6	gi|479326027|ref|YP_007866082.1|	-	0.34	10.4	2.7	3.8	7.1	0.2	2.3	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
zf-Di19	PF05605.7	gi|479326027|ref|YP_007866082.1|	-	0.4	10.8	1.7	12	6.1	0.1	2.1	1	1	1	2	2	2	0	Drought	induced	19	protein	(Di19),	zinc-binding
zf-CSL	PF05207.8	gi|479326027|ref|YP_007866082.1|	-	0.57	9.7	2.3	0.5	9.9	0.1	1.9	1	1	1	2	2	2	0	CSL	zinc	finger
zf-IS66	PF13005.2	gi|479326027|ref|YP_007866082.1|	-	1.2	9.1	4.1	6.8	6.7	1.4	2.1	2	0	0	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
WaaY	PF06176.6	gi|479326028|ref|YP_007866083.1|	-	0.011	14.9	0.5	0.017	14.3	0.2	1.4	1	1	0	1	1	1	0	Lipopolysaccharide	core	biosynthesis	protein	(WaaY)
RIO1	PF01163.17	gi|479326028|ref|YP_007866083.1|	-	0.043	13.1	0.1	0.12	11.7	0.1	1.6	1	1	0	2	2	2	0	RIO1	family
PALP	PF00291.20	gi|479326029|ref|YP_007866084.1|	-	9e-52	176.2	0.0	1.1e-51	175.8	0.0	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
TusA	PF01206.12	gi|479326030|ref|YP_007866085.1|	-	9.6e-07	28.3	0.0	1.2e-06	28.0	0.0	1.1	1	0	0	1	1	1	1	Sulfurtransferase	TusA
DrsE_2	PF13686.1	gi|479326031|ref|YP_007866086.1|	-	5.8e-12	45.6	0.0	2.9e-10	40.1	0.0	2.0	1	1	0	1	1	1	1	DsrE/DsrF/DrsH-like	family
DUF711	PF05167.7	gi|479326032|ref|YP_007866087.1|	-	4.2e-76	256.2	0.0	5.3e-76	255.9	0.0	1.0	1	0	0	1	1	1	1	Uncharacterised	ACR	(DUF711)
Antitoxin-MazE	PF04014.13	gi|479326033|ref|YP_007866088.1|	-	7.4e-09	35.1	0.0	2.3e-08	33.5	0.0	1.9	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
PhoU	PF01895.14	gi|479326033|ref|YP_007866088.1|	-	1e-06	29.0	15.1	2.5e-06	27.8	3.3	2.5	2	0	0	2	2	2	2	PhoU	domain
Gp-FAR-1	PF05823.7	gi|479326033|ref|YP_007866088.1|	-	0.026	14.4	0.7	0.56	10.1	0.1	2.3	2	0	0	2	2	2	0	Nematode	fatty	acid	retinoid	binding	protein	(Gp-FAR-1)
CENP-R	PF06729.7	gi|479326033|ref|YP_007866088.1|	-	0.034	13.8	0.2	0.13	11.9	0.0	2.0	1	1	1	2	2	2	0	Kinetochore	component,	CENP-R
Maelstrom	PF13017.1	gi|479326033|ref|YP_007866088.1|	-	0.22	10.9	2.0	0.34	10.3	0.3	2.0	1	1	2	3	3	3	0	piRNA	pathway	germ-plasm	component
Ded_cyto	PF06920.8	gi|479326033|ref|YP_007866088.1|	-	0.3	10.3	1.9	0.44	9.8	0.1	2.0	2	0	0	2	2	2	0	Dedicator	of	cytokinesis
QRPTase_C	PF01729.14	gi|479326034|ref|YP_007866089.1|	-	6.2e-21	74.6	0.0	8.5e-21	74.2	0.0	1.2	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
QRPTase_N	PF02749.11	gi|479326034|ref|YP_007866089.1|	-	0.00039	20.1	0.0	0.00067	19.4	0.0	1.4	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
Ribosomal_S19e	PF01090.14	gi|479326035|ref|YP_007866090.1|	-	1.2e-52	177.0	0.0	1.4e-52	176.8	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S19e
dsDNA_bind	PF01984.15	gi|479326036|ref|YP_007866091.1|	-	1.2e-30	105.6	14.9	1.5e-30	105.3	10.3	1.1	1	0	0	1	1	1	1	Double-stranded	DNA-binding	domain
SurA_N	PF09312.6	gi|479326036|ref|YP_007866091.1|	-	0.087	12.6	3.7	0.096	12.5	0.6	2.0	1	1	1	2	2	2	0	SurA	N-terminal	domain
4HB_MCP_1	PF12729.2	gi|479326036|ref|YP_007866091.1|	-	0.096	12.0	6.4	0.12	11.7	4.4	1.1	1	0	0	1	1	1	0	Four	helix	bundle	sensory	module	for	signal	transduction
Phage_B	PF02304.10	gi|479326036|ref|YP_007866091.1|	-	0.49	10.7	3.8	0.17	12.1	0.9	1.6	2	0	0	2	2	2	0	Scaffold	protein	B
Acetyltransf_6	PF13480.1	gi|479326036|ref|YP_007866091.1|	-	1.1	9.2	3.3	28	4.6	1.3	2.2	1	1	0	2	2	2	0	Acetyltransferase	(GNAT)	domain
DUF4355	PF14265.1	gi|479326036|ref|YP_007866091.1|	-	1.4	8.8	12.7	1.9	8.4	8.8	1.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4355)
Ribosomal_L39	PF00832.15	gi|479326037|ref|YP_007866092.1|	-	2.9e-22	77.8	6.6	4.1e-22	77.3	4.6	1.2	1	0	0	1	1	1	1	Ribosomal	L39	protein
Ribosomal_L31e	PF01198.14	gi|479326038|ref|YP_007866093.1|	-	1.2e-14	53.7	3.7	1.4e-14	53.4	2.6	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L31e
eIF-6	PF01912.13	gi|479326039|ref|YP_007866094.1|	-	6.8e-73	244.0	4.7	8e-73	243.7	3.2	1.0	1	0	0	1	1	1	1	eIF-6	family
Nicastrin	PF05450.10	gi|479326039|ref|YP_007866094.1|	-	0.036	13.3	0.0	0.055	12.7	0.0	1.2	1	0	0	1	1	1	0	Nicastrin
Ribosomal_L18ae	PF01775.12	gi|479326040|ref|YP_007866095.1|	-	4.1e-09	36.4	1.4	1e-08	35.1	0.8	1.6	1	1	1	2	2	2	1	Ribosomal	L18ae/LX	protein	domain
Prefoldin	PF02996.12	gi|479326041|ref|YP_007866096.1|	-	5.6e-28	97.0	4.0	6.6e-28	96.7	2.8	1.1	1	0	0	1	1	1	1	Prefoldin	subunit
Prefoldin_2	PF01920.15	gi|479326041|ref|YP_007866096.1|	-	0.002	17.8	5.3	0.0061	16.3	0.5	2.1	2	0	0	2	2	2	1	Prefoldin	subunit
Lyase_1	PF00206.15	gi|479326041|ref|YP_007866096.1|	-	0.0049	16.1	0.4	0.0055	15.9	0.3	1.2	1	0	0	1	1	1	1	Lyase
APG17	PF04108.7	gi|479326041|ref|YP_007866096.1|	-	0.036	12.8	3.3	0.19	10.4	0.4	2.0	2	0	0	2	2	2	0	Autophagy	protein	Apg17
DUF1216	PF06746.6	gi|479326041|ref|YP_007866096.1|	-	0.099	12.4	0.5	1.8	8.3	0.1	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1216)
Sec8_exocyst	PF04048.9	gi|479326041|ref|YP_007866096.1|	-	0.12	12.0	4.0	0.25	10.9	0.6	2.1	2	0	0	2	2	2	0	Sec8	exocyst	complex	component	specific	domain
DUF2096	PF09869.4	gi|479326041|ref|YP_007866096.1|	-	0.12	12.2	1.1	3.4	7.5	0.1	2.1	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2096)
Fib_alpha	PF08702.5	gi|479326041|ref|YP_007866096.1|	-	0.12	12.4	5.4	0.078	13.1	1.1	1.9	2	0	0	2	2	2	0	Fibrinogen	alpha/beta	chain	family
Snf7	PF03357.16	gi|479326041|ref|YP_007866096.1|	-	0.15	11.4	6.2	1.6	8.1	2.0	2.2	2	0	0	2	2	2	0	Snf7
eIF3_N	PF09440.5	gi|479326041|ref|YP_007866096.1|	-	0.18	11.9	1.4	14	5.8	0.4	2.1	2	0	0	2	2	2	0	eIF3	subunit	6	N	terminal	domain
Reo_sigmaC	PF04582.7	gi|479326041|ref|YP_007866096.1|	-	0.2	10.8	3.3	1.6	7.8	0.4	2.0	1	1	0	2	2	2	0	Reovirus	sigma	C	capsid	protein
DUF2130	PF09903.4	gi|479326041|ref|YP_007866096.1|	-	0.2	10.3	9.1	0.71	8.5	1.9	2.0	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2130)
DUF4140	PF13600.1	gi|479326041|ref|YP_007866096.1|	-	0.21	12.0	1.8	6.1	7.3	0.0	2.2	2	0	0	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
Spc7	PF08317.6	gi|479326041|ref|YP_007866096.1|	-	0.37	9.4	5.9	0.89	8.1	0.8	2.0	2	0	0	2	2	2	0	Spc7	kinetochore	protein
DUF1759	PF03564.10	gi|479326041|ref|YP_007866096.1|	-	0.41	10.4	3.1	0.28	10.9	0.7	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1759)
IncA	PF04156.9	gi|479326041|ref|YP_007866096.1|	-	0.58	9.7	7.5	1.2	8.6	0.1	2.0	2	0	0	2	2	2	0	IncA	protein
DUF1664	PF07889.7	gi|479326041|ref|YP_007866096.1|	-	0.61	9.8	3.7	1.3	8.8	0.6	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
CorA	PF01544.13	gi|479326041|ref|YP_007866096.1|	-	0.67	8.9	4.0	1.9	7.4	0.3	2.0	2	0	0	2	2	2	0	CorA-like	Mg2+	transporter	protein
Spc24	PF08286.6	gi|479326041|ref|YP_007866096.1|	-	1.1	9.0	6.0	1.4	8.6	1.6	2.0	2	0	0	2	2	2	0	Spc24	subunit	of	Ndc80
V-ATPase_C	PF03223.10	gi|479326041|ref|YP_007866096.1|	-	1.3	7.8	4.5	4.4	6.1	0.8	2.0	2	0	0	2	2	2	0	V-ATPase	subunit	C
BLOC1_2	PF10046.4	gi|479326041|ref|YP_007866096.1|	-	1.9	8.6	8.1	6.8	6.9	1.1	2.2	2	0	0	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
SRP54	PF00448.17	gi|479326042|ref|YP_007866097.1|	-	5.1e-71	238.1	0.0	8e-71	237.5	0.0	1.3	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SRP54_N	PF02881.14	gi|479326042|ref|YP_007866097.1|	-	1.8e-13	50.3	5.1	1.8e-13	50.3	3.5	1.9	2	0	0	2	2	1	1	SRP54-type	protein,	helical	bundle	domain
AAA_22	PF13401.1	gi|479326042|ref|YP_007866097.1|	-	8.7e-08	32.3	0.1	2.6e-07	30.8	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
ArgK	PF03308.11	gi|479326042|ref|YP_007866097.1|	-	2e-06	26.7	0.1	0.00019	20.3	0.1	2.4	1	1	0	1	1	1	1	ArgK	protein
cobW	PF02492.14	gi|479326042|ref|YP_007866097.1|	-	5.8e-05	22.5	1.0	8.3e-05	22.0	0.1	1.7	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
MobB	PF03205.9	gi|479326042|ref|YP_007866097.1|	-	0.00029	20.5	0.2	0.0017	18.0	0.0	2.3	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA	PF00004.24	gi|479326042|ref|YP_007866097.1|	-	0.0003	20.9	0.0	0.0011	19.1	0.0	2.0	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_30	PF13604.1	gi|479326042|ref|YP_007866097.1|	-	0.00042	19.9	0.0	0.00062	19.3	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
NTPase_1	PF03266.10	gi|479326042|ref|YP_007866097.1|	-	0.0013	18.5	3.0	0.28	10.8	0.1	3.2	2	1	1	3	3	3	1	NTPase
CmcI	PF04989.7	gi|479326042|ref|YP_007866097.1|	-	0.0026	17.1	0.0	0.0039	16.5	0.0	1.2	1	0	0	1	1	1	1	Cephalosporin	hydroxylase
CbiA	PF01656.18	gi|479326042|ref|YP_007866097.1|	-	0.0031	16.9	2.4	0.0031	16.9	1.7	2.7	1	1	1	2	2	2	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_33	PF13671.1	gi|479326042|ref|YP_007866097.1|	-	0.0037	17.1	0.0	0.017	15.0	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
AAA_14	PF13173.1	gi|479326042|ref|YP_007866097.1|	-	0.0056	16.5	1.5	0.04	13.8	0.0	2.5	1	1	1	2	2	2	1	AAA	domain
AAA_31	PF13614.1	gi|479326042|ref|YP_007866097.1|	-	0.0094	15.8	1.5	6.1	6.7	0.0	3.3	3	1	0	3	3	3	0	AAA	domain
DUF445	PF04286.7	gi|479326042|ref|YP_007866097.1|	-	0.013	15.0	1.1	0.015	14.8	0.8	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF445)
DUF258	PF03193.11	gi|479326042|ref|YP_007866097.1|	-	0.013	14.7	0.0	0.025	13.7	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_17	PF13207.1	gi|479326042|ref|YP_007866097.1|	-	0.019	15.7	2.8	0.059	14.1	0.1	2.4	2	1	0	2	2	2	0	AAA	domain
DUF3919	PF13057.1	gi|479326042|ref|YP_007866097.1|	-	0.02	14.3	2.4	0.032	13.7	1.7	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3919)
Arch_ATPase	PF01637.13	gi|479326042|ref|YP_007866097.1|	-	0.021	14.5	0.2	0.021	14.5	0.2	2.4	1	1	1	2	2	2	0	Archaeal	ATPase
Thymidylate_kin	PF02223.12	gi|479326042|ref|YP_007866097.1|	-	0.028	13.8	0.2	0.15	11.4	0.0	2.3	2	1	0	2	2	2	0	Thymidylate	kinase
Zeta_toxin	PF06414.7	gi|479326042|ref|YP_007866097.1|	-	0.038	13.0	0.1	0.092	11.8	0.0	1.7	2	0	0	2	2	2	0	Zeta	toxin
DUF2075	PF09848.4	gi|479326042|ref|YP_007866097.1|	-	0.042	12.8	0.0	0.076	11.9	0.0	1.4	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
TIR-like	PF10137.4	gi|479326042|ref|YP_007866097.1|	-	0.042	13.4	0.9	1.2	8.7	0.0	3.0	2	1	2	4	4	4	0	Predicted	nucleotide-binding	protein	containing	TIR-like	domain
AAA_24	PF13479.1	gi|479326042|ref|YP_007866097.1|	-	0.051	13.1	0.3	0.17	11.4	0.2	2.0	1	1	0	1	1	1	0	AAA	domain
ArsA_ATPase	PF02374.10	gi|479326042|ref|YP_007866097.1|	-	0.06	12.3	1.0	0.15	11.0	0.0	2.1	3	0	0	3	3	3	0	Anion-transporting	ATPase
CO_dh	PF02552.11	gi|479326042|ref|YP_007866097.1|	-	0.073	12.6	0.4	0.23	11.0	0.1	1.9	2	0	0	2	2	2	0	CO	dehydrogenase	beta	subunit/acetyl-CoA	synthase	epsilon	subunit
AAA_28	PF13521.1	gi|479326042|ref|YP_007866097.1|	-	0.14	12.0	0.0	0.34	10.8	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
DUF4559	PF15112.1	gi|479326042|ref|YP_007866097.1|	-	2.3	7.2	4.7	3.3	6.7	2.8	1.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4559)
DUF793	PF05633.6	gi|479326042|ref|YP_007866097.1|	-	3.5	6.2	6.0	5.4	5.6	4.2	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF793)
Virul_fac_BrkB	PF03631.10	gi|479326043|ref|YP_007866098.1|	-	0.0042	16.4	1.1	0.0045	16.3	0.7	1.0	1	0	0	1	1	1	1	Virulence	factor	BrkB
Synaptobrevin	PF00957.16	gi|479326043|ref|YP_007866098.1|	-	0.14	11.7	0.2	0.15	11.7	0.1	1.2	1	0	0	1	1	1	0	Synaptobrevin
Spt5-NGN	PF03439.8	gi|479326044|ref|YP_007866099.1|	-	8.1e-22	76.7	0.1	1.6e-21	75.8	0.0	1.5	2	0	0	2	2	2	1	Early	transcription	elongation	factor	of	RNA	pol	II,	NGN	section
KOW	PF00467.24	gi|479326044|ref|YP_007866099.1|	-	2.9e-07	29.9	0.4	2.9e-07	29.9	0.3	2.1	2	0	0	2	2	2	1	KOW	motif
NusG	PF02357.14	gi|479326044|ref|YP_007866099.1|	-	0.023	14.9	0.1	0.061	13.5	0.0	1.8	2	1	0	2	2	2	0	Transcription	termination	factor	nusG
Ribosomal_L11	PF00298.14	gi|479326045|ref|YP_007866100.1|	-	6.2e-22	77.5	3.1	1.3e-21	76.5	2.1	1.5	1	0	0	1	1	1	1	Ribosomal	protein	L11,	RNA	binding	domain
Ribosomal_L11_N	PF03946.9	gi|479326045|ref|YP_007866100.1|	-	4.5e-21	74.0	0.7	9.7e-21	72.9	0.4	1.7	1	1	0	1	1	1	1	Ribosomal	protein	L11,	N-terminal	domain
Ribosomal_L1	PF00687.16	gi|479326046|ref|YP_007866101.1|	-	1.5e-39	135.6	3.0	1.7e-39	135.4	2.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L1p/L10e	family
Ribosomal_L10	PF00466.15	gi|479326047|ref|YP_007866102.1|	-	2.1e-25	88.5	1.5	1.1e-24	86.2	0.4	2.4	2	0	0	2	2	2	1	Ribosomal	protein	L10
Ribosomal_60s	PF00428.14	gi|479326047|ref|YP_007866102.1|	-	1.6e-06	28.4	4.1	4.3e-06	27.0	2.8	1.8	1	0	0	1	1	1	1	60s	Acidic	ribosomal	protein
Ribosomal_60s	PF00428.14	gi|479326048|ref|YP_007866103.1|	-	8.5e-19	67.7	13.5	9.9e-19	67.5	9.4	1.1	1	0	0	1	1	1	1	60s	Acidic	ribosomal	protein
PepSY_2	PF13670.1	gi|479326048|ref|YP_007866103.1|	-	0.023	14.5	3.2	2.1	8.2	0.0	2.2	2	0	0	2	2	2	0	Peptidase	propeptide	and	YPEB	domain
DUF4424	PF14415.1	gi|479326048|ref|YP_007866103.1|	-	0.095	12.1	0.7	0.11	11.9	0.5	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4424)
DUF3323	PF11796.3	gi|479326048|ref|YP_007866103.1|	-	0.11	11.8	2.4	0.17	11.2	1.6	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	N-terminus	(DUF3323)
DUF1682	PF07946.9	gi|479326048|ref|YP_007866103.1|	-	0.26	10.1	3.4	0.29	9.9	2.4	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1682)
tRNA-synt_2c	PF01411.14	gi|479326049|ref|YP_007866104.1|	-	3e-112	375.7	0.1	7.6e-112	374.3	0.0	1.6	2	0	0	2	2	2	1	tRNA	synthetases	class	II	(A)
tRNA_SAD	PF07973.9	gi|479326049|ref|YP_007866104.1|	-	4.4e-14	52.0	0.4	1e-13	50.9	0.3	1.6	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
DHHA1	PF02272.14	gi|479326049|ref|YP_007866104.1|	-	0.0085	15.7	0.1	0.019	14.6	0.0	1.6	1	0	0	1	1	1	1	DHHA1	domain
Rpr2	PF04032.11	gi|479326049|ref|YP_007866104.1|	-	0.095	12.5	0.5	0.24	11.2	0.3	1.7	1	0	0	1	1	1	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
Reo_sigma1	PF01664.11	gi|479326049|ref|YP_007866104.1|	-	0.22	10.5	0.3	20	4.1	0.0	2.5	3	0	0	3	3	3	0	Reovirus	viral	attachment	protein	sigma	1
DUF434	PF04256.7	gi|479326050|ref|YP_007866105.1|	-	2.3e-23	81.3	1.1	4.3e-23	80.4	0.8	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF434)
Arg_repressor	PF01316.16	gi|479326050|ref|YP_007866105.1|	-	0.2	11.2	0.2	0.2	11.2	0.1	2.0	2	1	0	2	2	2	0	Arginine	repressor,	DNA	binding	domain
S-antigen	PF05756.6	gi|479326051|ref|YP_007866106.1|	-	0.054	13.4	3.7	0.048	13.6	2.0	1.4	1	1	0	1	1	1	0	S-antigen	protein
DUF4457	PF14652.1	gi|479326051|ref|YP_007866106.1|	-	0.066	12.1	2.2	0.068	12.1	1.5	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4457)
PIP49_N	PF14875.1	gi|479326051|ref|YP_007866106.1|	-	0.3	10.7	2.1	0.34	10.5	1.5	1.1	1	0	0	1	1	1	0	N-term	cysteine-rich	ER,	FAM69
TarH	PF02203.10	gi|479326053|ref|YP_007866108.1|	-	0.02	14.7	4.0	0.036	13.9	2.8	1.3	1	0	0	1	1	1	0	Tar	ligand	binding	domain	homologue
DivIC	PF04977.10	gi|479326053|ref|YP_007866108.1|	-	0.21	11.1	3.6	0.54	9.7	2.5	1.6	1	0	0	1	1	1	0	Septum	formation	initiator
DUF4231	PF14015.1	gi|479326053|ref|YP_007866108.1|	-	0.21	11.5	3.9	0.16	11.9	0.3	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4231)
DnaJ-X	PF14308.1	gi|479326053|ref|YP_007866108.1|	-	0.34	10.1	3.5	0.55	9.4	2.4	1.2	1	0	0	1	1	1	0	X-domain	of	DnaJ-containing
ThiI	PF02568.9	gi|479326055|ref|YP_007866110.1|	-	1.4e-52	178.0	0.2	3.4e-52	176.7	0.0	1.6	2	0	0	2	2	2	1	Thiamine	biosynthesis	protein	(ThiI)
THUMP	PF02926.12	gi|479326055|ref|YP_007866110.1|	-	5.3e-20	71.7	2.6	5.3e-20	71.7	1.8	1.7	2	0	0	2	2	2	1	THUMP	domain
QueC	PF06508.8	gi|479326055|ref|YP_007866110.1|	-	3.4e-06	26.4	0.0	0.0009	18.5	0.0	2.7	1	1	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
NAD_synthase	PF02540.12	gi|479326055|ref|YP_007866110.1|	-	0.00031	19.7	0.6	0.014	14.3	0.0	2.4	2	0	0	2	2	2	1	NAD	synthase
ATP_bind_3	PF01171.15	gi|479326055|ref|YP_007866110.1|	-	0.0029	17.1	0.0	0.051	13.0	0.0	2.2	1	1	0	1	1	1	1	PP-loop	family
ATP_bind_4	PF01902.12	gi|479326055|ref|YP_007866110.1|	-	0.0074	15.6	0.1	0.092	12.1	0.0	2.3	2	0	0	2	2	2	1	ATP-binding	region
NAD_binding_5	PF07994.7	gi|479326056|ref|YP_007866111.1|	-	2.8e-48	164.9	0.0	1.1e-47	162.9	0.0	1.9	1	1	0	1	1	1	1	Myo-inositol-1-phosphate	synthase
Inos-1-P_synth	PF01658.12	gi|479326056|ref|YP_007866111.1|	-	7.5e-21	74.0	0.1	2.1e-20	72.6	0.0	1.7	2	0	0	2	2	2	1	Myo-inositol-1-phosphate	synthase
Oxidored_q1	PF00361.15	gi|479326057|ref|YP_007866112.1|	-	4.3e-43	147.5	29.7	4.3e-43	147.5	20.6	2.6	2	1	0	2	2	2	1	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
Oxidored_q1	PF00361.15	gi|479326058|ref|YP_007866113.1|	-	7.3e-83	277.9	72.8	9.8e-49	166.0	25.2	7.8	6	2	1	7	7	7	3	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
Oxidored_q1_N	PF00662.15	gi|479326058|ref|YP_007866113.1|	-	1.9e-06	27.3	8.5	0.00018	20.9	0.8	6.2	7	0	0	7	7	7	2	NADH-Ubiquinone	oxidoreductase	(complex	I),	chain	5	N-terminus
DUF2371	PF10177.4	gi|479326058|ref|YP_007866113.1|	-	2.3	8.1	4.5	4	7.3	0.1	2.9	2	0	0	2	2	2	0	Uncharacterised	conserved	protein	(DUF2371)
Oxidored_q2	PF00420.19	gi|479326059|ref|YP_007866114.1|	-	5.1e-11	42.0	7.4	5.9e-11	41.8	5.1	1.1	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
TspO_MBR	PF03073.10	gi|479326059|ref|YP_007866114.1|	-	0.065	12.7	4.3	0.1	12.1	3.0	1.4	1	1	0	1	1	1	0	TspO/MBR	family
Oxidored_q3	PF00499.15	gi|479326060|ref|YP_007866115.1|	-	9.5e-12	44.8	17.5	1.3e-11	44.5	12.2	1.2	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	6
DUF998	PF06197.8	gi|479326060|ref|YP_007866115.1|	-	0.23	10.7	17.5	0.035	13.4	9.4	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF998)
Fer4	PF00037.22	gi|479326061|ref|YP_007866116.1|	-	6.9e-15	53.9	12.8	3.1e-09	36.0	2.1	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|479326061|ref|YP_007866116.1|	-	7.3e-11	41.7	6.6	1.3e-10	40.9	4.6	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|479326061|ref|YP_007866116.1|	-	2e-10	40.8	9.9	3.5e-10	40.0	6.9	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|479326061|ref|YP_007866116.1|	-	2.5e-10	39.7	12.8	8.7e-06	25.3	2.1	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|479326061|ref|YP_007866116.1|	-	1.7e-09	37.2	6.2	2.9e-09	36.5	4.3	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|479326061|ref|YP_007866116.1|	-	2e-08	34.3	9.0	3.5e-08	33.5	6.2	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|479326061|ref|YP_007866116.1|	-	1.4e-07	31.0	11.5	0.00033	20.3	1.6	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|479326061|ref|YP_007866116.1|	-	1.4e-07	32.1	5.9	0.00021	21.9	5.3	2.4	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_17	PF13534.1	gi|479326061|ref|YP_007866116.1|	-	5.7e-07	29.7	0.1	0.022	15.1	0.0	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|479326061|ref|YP_007866116.1|	-	4.7e-06	26.4	9.9	0.0078	16.4	1.3	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|479326061|ref|YP_007866116.1|	-	9.7e-06	25.5	16.4	0.00039	20.3	6.3	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|479326061|ref|YP_007866116.1|	-	6.3e-05	23.2	18.3	0.0066	16.9	3.6	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|479326061|ref|YP_007866116.1|	-	0.0032	18.0	9.4	0.062	13.8	0.3	2.7	2	1	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.1	gi|479326061|ref|YP_007866116.1|	-	0.0045	17.3	14.5	0.11	12.9	2.5	2.4	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|479326061|ref|YP_007866116.1|	-	0.18	12.2	11.6	0.69	10.3	2.4	2.5	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
NADHdh	PF00146.16	gi|479326062|ref|YP_007866117.1|	-	1.9e-52	178.2	25.4	7.7e-50	169.7	17.6	2.0	1	1	0	1	1	1	1	NADH	dehydrogenase
TMEM18	PF14770.1	gi|479326062|ref|YP_007866117.1|	-	9.5	5.7	11.4	4.6	6.8	0.2	3.2	3	0	0	3	3	3	0	Transmembrane	protein	18
Complex1_49kDa	PF00346.14	gi|479326063|ref|YP_007866118.1|	-	5.6e-62	209.2	0.0	6.8e-62	208.9	0.0	1.1	1	0	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase,	49	Kd	subunit
Complex1_30kDa	PF00329.14	gi|479326064|ref|YP_007866119.1|	-	1.6e-32	111.8	0.0	2.2e-32	111.3	0.0	1.2	1	0	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase,	30	Kd	subunit
Mac-1	PF09028.5	gi|479326064|ref|YP_007866119.1|	-	0.022	13.5	0.1	0.03	13.0	0.0	1.1	1	0	0	1	1	1	0	Mac	1
Oxidored_q4	PF00507.14	gi|479326065|ref|YP_007866120.1|	-	1.3e-08	34.5	3.2	1.6e-08	34.2	2.2	1.2	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase,	chain	3
YqhR	PF11085.3	gi|479326065|ref|YP_007866120.1|	-	0.11	11.9	1.5	0.17	11.3	1.1	1.3	1	0	0	1	1	1	0	Conserved	membrane	protein	YqhR
Thy1	PF02511.10	gi|479326066|ref|YP_007866121.1|	-	4e-65	218.7	0.9	4.9e-65	218.4	0.6	1.1	1	0	0	1	1	1	1	Thymidylate	synthase	complementing	protein
DUF2175	PF09943.4	gi|479326067|ref|YP_007866122.1|	-	2.4e-30	104.5	2.7	2.6e-30	104.4	1.9	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2175)
V-SNARE	PF05008.10	gi|479326067|ref|YP_007866122.1|	-	0.043	13.9	5.4	0.17	12.1	3.7	1.8	1	1	1	2	2	2	0	Vesicle	transport	v-SNARE	protein	N-terminus
Vps39_2	PF10367.4	gi|479326067|ref|YP_007866122.1|	-	0.082	13.0	1.0	0.39	10.9	0.0	2.0	2	0	0	2	2	2	0	Vacuolar	sorting	protein	39	domain	2
Unstab_antitox	PF09720.5	gi|479326067|ref|YP_007866122.1|	-	0.096	12.3	0.9	0.25	11.0	0.6	1.7	1	0	0	1	1	1	0	Putative	addiction	module	component
DUF1507	PF07408.6	gi|479326067|ref|YP_007866122.1|	-	0.3	10.8	2.4	2.2	8.0	0.1	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1507)
C5-epim_C	PF06662.8	gi|479326068|ref|YP_007866123.1|	-	0.002	17.4	0.6	2.1	7.5	0.0	3.6	3	1	1	4	4	4	1	D-glucuronyl	C5-epimerase	C-terminus
Thioredoxin_2	PF13098.1	gi|479326068|ref|YP_007866123.1|	-	0.031	14.4	0.4	0.096	12.8	0.2	2.0	1	1	0	1	1	1	0	Thioredoxin-like	domain
Glyco_hydro_47	PF01532.15	gi|479326068|ref|YP_007866123.1|	-	0.097	11.3	0.2	2.5	6.6	0.0	2.1	1	1	1	2	2	2	0	Glycosyl	hydrolase	family	47
Thioredoxin_7	PF13899.1	gi|479326068|ref|YP_007866123.1|	-	0.17	11.9	0.0	0.35	10.9	0.0	1.6	1	0	0	1	1	1	0	Thioredoxin-like
DUF364	PF04016.7	gi|479326069|ref|YP_007866124.1|	-	1.6e-24	85.9	0.0	2.2e-24	85.4	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF364)
DUF4213	PF13938.1	gi|479326069|ref|YP_007866124.1|	-	5.5e-08	32.8	0.0	1.1e-07	31.8	0.0	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4213)
NTP_transferase	PF00483.18	gi|479326070|ref|YP_007866125.1|	-	2.5e-32	112.1	0.0	3.3e-32	111.7	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
Hexapep	PF00132.19	gi|479326070|ref|YP_007866125.1|	-	1.1e-10	40.5	4.3	7.8e-05	22.0	0.4	3.3	1	1	0	2	2	2	2	Bacterial	transferase	hexapeptide	(six	repeats)
NTP_transf_3	PF12804.2	gi|479326070|ref|YP_007866125.1|	-	5.7e-09	36.2	0.0	7.6e-09	35.8	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Sod_Fe_C	PF02777.13	gi|479326071|ref|YP_007866126.1|	-	3.1e-39	133.0	0.9	5.4e-39	132.3	0.6	1.3	1	0	0	1	1	1	1	Iron/manganese	superoxide	dismutases,	C-terminal	domain
Sod_Fe_N	PF00081.17	gi|479326071|ref|YP_007866126.1|	-	2.2e-29	101.5	0.1	2.2e-29	101.5	0.1	2.1	3	0	0	3	3	3	1	Iron/manganese	superoxide	dismutases,	alpha-hairpin	domain
DUF948	PF06103.6	gi|479326072|ref|YP_007866127.1|	-	0.07	12.9	9.4	11	6.0	0.3	5.2	3	2	0	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF948)
TusA	PF01206.12	gi|479326073|ref|YP_007866128.1|	-	6.4e-05	22.4	0.1	8.2e-05	22.1	0.0	1.5	1	1	0	1	1	1	1	Sulfurtransferase	TusA
Thioredoxin_3	PF13192.1	gi|479326074|ref|YP_007866129.1|	-	2e-09	37.1	0.0	4e-09	36.1	0.0	1.5	1	0	0	1	1	1	1	Thioredoxin	domain
Glutaredoxin	PF00462.19	gi|479326074|ref|YP_007866129.1|	-	0.00028	20.8	0.0	0.0012	18.8	0.0	2.2	1	1	0	1	1	1	1	Glutaredoxin
Thioredoxin_4	PF13462.1	gi|479326074|ref|YP_007866129.1|	-	0.0068	16.4	0.0	0.052	13.5	0.0	2.2	2	0	0	2	2	2	1	Thioredoxin
DUF3870	PF12986.2	gi|479326074|ref|YP_007866129.1|	-	0.015	15.5	0.3	0.042	14.0	0.2	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3870)
Thioredoxin_2	PF13098.1	gi|479326074|ref|YP_007866129.1|	-	0.041	14.0	0.2	2.3	8.4	0.0	2.5	1	1	1	2	2	2	0	Thioredoxin-like	domain
DEAD_2	PF06733.10	gi|479326075|ref|YP_007866130.1|	-	2.6e-30	105.1	0.0	5.6e-30	104.0	0.0	1.6	1	0	0	1	1	1	1	DEAD_2
Helicase_C_2	PF13307.1	gi|479326075|ref|YP_007866130.1|	-	2.6e-24	86.0	0.1	9.4e-24	84.2	0.0	2.0	2	0	0	2	2	2	1	Helicase	C-terminal	domain
ResIII	PF04851.10	gi|479326075|ref|YP_007866130.1|	-	1.9e-08	34.3	0.9	2e-07	31.0	0.0	2.7	1	1	1	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
DEAD	PF00270.24	gi|479326075|ref|YP_007866130.1|	-	8.5e-06	25.3	0.0	0.012	15.1	0.0	3.4	4	0	0	4	4	4	2	DEAD/DEAH	box	helicase
PhoH	PF02562.11	gi|479326075|ref|YP_007866130.1|	-	0.00023	20.4	1.1	0.011	14.9	0.0	3.2	2	1	1	3	3	3	1	PhoH-like	protein
SNF2_N	PF00176.18	gi|479326075|ref|YP_007866130.1|	-	0.037	12.8	0.1	0.08	11.7	0.1	1.5	1	1	0	1	1	1	0	SNF2	family	N-terminal	domain
NAAA-beta	PF15508.1	gi|479326075|ref|YP_007866130.1|	-	0.12	12.7	1.9	0.24	11.7	0.1	2.4	3	1	0	3	3	3	0	beta	subunit	of	N-acylethanolamine-hydrolyzing	acid	amidase
CAGE1	PF15066.1	gi|479326075|ref|YP_007866130.1|	-	0.36	9.2	7.0	0.54	8.6	4.8	1.2	1	0	0	1	1	1	0	Cancer-associated	gene	protein	1	family
Rieske	PF00355.21	gi|479326077|ref|YP_007866132.1|	-	1.9e-15	56.1	0.0	2.3e-15	55.9	0.0	1.1	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Rieske_2	PF13806.1	gi|479326077|ref|YP_007866132.1|	-	3.5e-06	26.6	0.0	4.4e-06	26.3	0.0	1.1	1	0	0	1	1	1	1	Rieske-like	[2Fe-2S]	domain
DHquinase_I	PF01487.10	gi|479326078|ref|YP_007866133.1|	-	4.1e-13	49.5	0.5	2.2e-11	43.8	0.3	2.1	2	0	0	2	2	2	2	Type	I	3-dehydroquinase
EPSP_synthase	PF00275.15	gi|479326079|ref|YP_007866134.1|	-	2.2e-65	220.7	0.0	2.6e-65	220.4	0.0	1.0	1	0	0	1	1	1	1	EPSP	synthase	(3-phosphoshikimate	1-carboxyvinyltransferase)
GHMP_kinases_N	PF00288.21	gi|479326080|ref|YP_007866135.1|	-	2.3e-09	37.1	0.8	7.7e-09	35.4	0.3	2.1	3	0	0	3	3	3	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|479326080|ref|YP_007866135.1|	-	0.00056	20.0	0.1	0.0018	18.4	0.0	1.9	2	0	0	2	2	2	1	GHMP	kinases	C	terminal
Chorismate_synt	PF01264.16	gi|479326081|ref|YP_007866136.1|	-	2.3e-130	434.1	0.0	2.7e-130	433.9	0.0	1.0	1	0	0	1	1	1	1	Chorismate	synthase
Shikimate_dh_N	PF08501.6	gi|479326082|ref|YP_007866137.1|	-	6.4e-24	83.8	0.1	2.2e-23	82.0	0.0	2.0	2	0	0	2	2	2	1	Shikimate	dehydrogenase	substrate	binding	domain
Shikimate_DH	PF01488.15	gi|479326082|ref|YP_007866137.1|	-	5.6e-12	45.9	0.1	9.9e-12	45.1	0.0	1.4	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
DUF1827	PF08860.5	gi|479326082|ref|YP_007866137.1|	-	0.091	12.8	3.1	8.3	6.5	0.2	2.6	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF1827)
YebO	PF13974.1	gi|479326082|ref|YP_007866137.1|	-	0.12	12.1	0.4	0.31	10.8	0.3	1.7	1	0	0	1	1	1	0	YebO-like	protein
DHQ_synthase	PF01761.15	gi|479326083|ref|YP_007866138.1|	-	1.7e-92	309.0	0.0	2.1e-92	308.7	0.0	1.1	1	0	0	1	1	1	1	3-dehydroquinate	synthase
Fe-ADH	PF00465.14	gi|479326083|ref|YP_007866138.1|	-	1.9e-10	39.9	0.1	9.9e-08	31.0	0.0	2.3	2	0	0	2	2	2	2	Iron-containing	alcohol	dehydrogenase
Fe-ADH_2	PF13685.1	gi|479326083|ref|YP_007866138.1|	-	2.4e-08	33.6	0.0	3.5e-08	33.0	0.0	1.3	1	1	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
DAHP_synth_1	PF00793.15	gi|479326084|ref|YP_007866139.1|	-	2.7e-74	249.2	0.0	3.5e-74	248.8	0.0	1.1	1	0	0	1	1	1	1	DAHP	synthetase	I	family
NeuB	PF03102.9	gi|479326084|ref|YP_007866139.1|	-	7.2e-10	38.4	0.1	8.7e-05	21.7	0.0	2.9	2	1	1	3	3	3	2	NeuB	family
PDH	PF02153.12	gi|479326085|ref|YP_007866140.1|	-	7.9e-22	77.3	0.1	2.1e-21	75.9	0.0	1.7	2	0	0	2	2	2	1	Prephenate	dehydrogenase
CM_2	PF01817.16	gi|479326085|ref|YP_007866140.1|	-	3.1e-20	72.0	0.2	5.5e-20	71.2	0.2	1.4	1	0	0	1	1	1	1	Chorismate	mutase	type	II
F420_oxidored	PF03807.12	gi|479326085|ref|YP_007866140.1|	-	1.2e-12	48.0	0.0	2.6e-12	46.9	0.0	1.6	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
Shikimate_DH	PF01488.15	gi|479326085|ref|YP_007866140.1|	-	1.9e-06	27.9	0.5	9.6e-06	25.7	0.0	2.3	3	0	0	3	3	3	1	Shikimate	/	quinate	5-dehydrogenase
NAD_binding_2	PF03446.10	gi|479326085|ref|YP_007866140.1|	-	0.0021	17.9	0.0	0.0048	16.7	0.0	1.6	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
IlvN	PF07991.7	gi|479326085|ref|YP_007866140.1|	-	0.0045	16.3	0.0	0.0082	15.5	0.0	1.4	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
3HCDH_N	PF02737.13	gi|479326085|ref|YP_007866140.1|	-	0.015	14.9	0.0	0.93	9.1	0.0	2.4	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Beta-Casp	PF10996.3	gi|479326085|ref|YP_007866140.1|	-	0.025	14.5	0.1	0.41	10.5	0.0	2.6	1	1	1	2	2	2	0	Beta-Casp	domain
NAD_Gly3P_dh_N	PF01210.18	gi|479326085|ref|YP_007866140.1|	-	0.13	11.9	0.4	1.9	8.2	0.1	2.8	2	1	0	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Transket_pyr	PF02779.19	gi|479326086|ref|YP_007866141.1|	-	1.3e-37	129.0	0.0	1.8e-37	128.5	0.0	1.2	1	0	0	1	1	1	1	Transketolase,	pyrimidine	binding	domain
Transketolase_C	PF02780.15	gi|479326086|ref|YP_007866141.1|	-	2.1e-26	92.2	0.1	4.9e-26	91.0	0.0	1.6	2	0	0	2	2	2	1	Transketolase,	C-terminal	domain
Imm49	PF15660.1	gi|479326086|ref|YP_007866141.1|	-	0.07	13.1	0.1	4	7.5	0.0	2.4	2	0	0	2	2	2	0	Immunity	protein	49
Transketolase_N	PF00456.16	gi|479326087|ref|YP_007866142.1|	-	2.3e-49	168.0	0.1	4.3e-49	167.1	0.1	1.4	1	1	0	1	1	1	1	Transketolase,	thiamine	diphosphate	binding	domain
DXP_synthase_N	PF13292.1	gi|479326087|ref|YP_007866142.1|	-	1.3e-09	37.4	0.6	1.1e-05	24.5	0.5	2.5	1	1	1	2	2	2	2	1-deoxy-D-xylulose-5-phosphate	synthase
TPP_enzyme_C	PF02775.16	gi|479326087|ref|YP_007866142.1|	-	7.3e-08	32.1	0.8	1.6e-06	27.7	0.6	2.2	1	1	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
E1_dh	PF00676.15	gi|479326087|ref|YP_007866142.1|	-	9.5e-08	31.1	0.0	1.4e-07	30.5	0.0	1.2	1	0	0	1	1	1	1	Dehydrogenase	E1	component
XFP_N	PF09364.5	gi|479326087|ref|YP_007866142.1|	-	0.0032	16.1	0.1	0.0041	15.7	0.1	1.2	1	0	0	1	1	1	1	XFP	N-terminal	domain
ThiF	PF00899.16	gi|479326088|ref|YP_007866143.1|	-	4.3e-40	136.6	0.4	1.8e-39	134.6	0.4	1.9	2	0	0	2	2	2	1	ThiF	family
MoeZ_MoeB	PF05237.8	gi|479326088|ref|YP_007866143.1|	-	1.1e-07	31.2	0.2	5e-07	29.2	0.1	2.0	2	0	0	2	2	2	1	MoeZ/MoeB	domain
TrkA_N	PF02254.13	gi|479326088|ref|YP_007866143.1|	-	0.0044	17.0	0.1	0.011	15.7	0.1	1.7	1	0	0	1	1	1	1	TrkA-N	domain
2-Hacid_dh_C	PF02826.14	gi|479326088|ref|YP_007866143.1|	-	0.0077	15.4	0.0	0.018	14.2	0.0	1.6	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
ApbA	PF02558.11	gi|479326088|ref|YP_007866143.1|	-	0.036	13.5	0.1	0.056	12.8	0.0	1.3	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
Shikimate_DH	PF01488.15	gi|479326088|ref|YP_007866143.1|	-	0.05	13.6	0.1	0.099	12.7	0.0	1.6	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
Saccharop_dh	PF03435.13	gi|479326088|ref|YP_007866143.1|	-	0.073	12.0	1.2	0.11	11.4	0.8	1.4	1	1	0	1	1	1	0	Saccharopine	dehydrogenase
3HCDH_N	PF02737.13	gi|479326088|ref|YP_007866143.1|	-	0.099	12.2	0.0	0.15	11.7	0.0	1.3	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_Gly3P_dh_N	PF01210.18	gi|479326088|ref|YP_007866143.1|	-	0.14	11.9	0.0	0.2	11.3	0.0	1.3	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
DAO	PF01266.19	gi|479326088|ref|YP_007866143.1|	-	0.73	8.6	3.1	1	8.2	2.1	1.1	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
UPF0104	PF03706.8	gi|479326089|ref|YP_007866144.1|	-	1.6e-10	40.7	15.4	3.2e-10	39.7	10.7	1.5	1	1	0	1	1	1	1	Uncharacterised	protein	family	(UPF0104)
FA_desaturase	PF00487.19	gi|479326089|ref|YP_007866144.1|	-	1.3	8.4	10.2	0.18	11.2	2.5	2.2	1	1	1	2	2	2	0	Fatty	acid	desaturase
Pcc1	PF09341.5	gi|479326091|ref|YP_007866146.1|	-	0.0027	17.7	0.0	0.0031	17.5	0.0	1.2	1	0	0	1	1	1	1	Transcription	factor	Pcc1
Ribosomal_L16	PF00252.13	gi|479326092|ref|YP_007866147.1|	-	1.6e-30	105.6	0.1	1.8e-30	105.4	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L16p/L10e
Diphthamide_syn	PF01866.12	gi|479326093|ref|YP_007866148.1|	-	2.1e-94	316.1	0.0	2.5e-94	315.9	0.0	1.0	1	0	0	1	1	1	1	Putative	diphthamide	synthesis	protein
DUF506	PF04720.7	gi|479326093|ref|YP_007866148.1|	-	0.023	14.3	0.0	5.4	6.5	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF506)
UPF0180	PF03698.8	gi|479326093|ref|YP_007866148.1|	-	0.054	13.3	0.0	3	7.7	0.0	2.7	2	1	0	2	2	2	0	Uncharacterised	protein	family	(UPF0180)
DUF2659	PF10858.3	gi|479326093|ref|YP_007866148.1|	-	0.07	12.5	0.0	0.14	11.5	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2659)
ECR1_N	PF14382.1	gi|479326094|ref|YP_007866149.1|	-	8.5e-10	37.7	0.0	1.9e-09	36.6	0.0	1.6	1	0	0	1	1	1	1	Exosome	complex	exonuclease	RRP4	N-terminal	region
S1	PF00575.18	gi|479326094|ref|YP_007866149.1|	-	2.8e-06	27.3	0.6	2.8e-05	24.0	0.4	2.2	1	1	0	1	1	1	1	S1	RNA	binding	domain
Mu-like_Com	PF10122.4	gi|479326094|ref|YP_007866149.1|	-	0.0032	16.4	1.4	0.0067	15.4	1.0	1.5	1	0	0	1	1	1	1	Mu-like	prophage	protein	Com
OrfB_Zn_ribbon	PF07282.6	gi|479326094|ref|YP_007866149.1|	-	0.0035	16.9	1.3	0.0064	16.1	0.9	1.3	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
DUF2318	PF10080.4	gi|479326094|ref|YP_007866149.1|	-	0.023	14.4	0.4	0.039	13.7	0.2	1.3	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2318)
zf-FPG_IleRS	PF06827.9	gi|479326094|ref|YP_007866149.1|	-	0.029	14.0	0.7	0.32	10.6	0.1	2.2	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
HypA	PF01155.14	gi|479326094|ref|YP_007866149.1|	-	0.042	13.5	1.0	0.093	12.4	0.7	1.7	1	1	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zf-ribbon_3	PF13248.1	gi|479326094|ref|YP_007866149.1|	-	0.057	12.6	0.3	0.11	11.7	0.2	1.5	1	0	0	1	1	1	0	zinc-ribbon	domain
IL4	PF00727.13	gi|479326094|ref|YP_007866149.1|	-	0.063	13.1	0.0	0.11	12.3	0.0	1.4	1	0	0	1	1	1	0	Interleukin	4
EXOSC1	PF10447.4	gi|479326094|ref|YP_007866149.1|	-	0.079	12.9	0.8	0.33	10.9	0.2	2.2	2	1	0	2	2	2	0	Exosome	component	EXOSC1/CSL4
DZR	PF12773.2	gi|479326094|ref|YP_007866149.1|	-	0.083	12.7	0.6	0.14	12.0	0.4	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
zinc_ribbon_2	PF13240.1	gi|479326094|ref|YP_007866149.1|	-	0.52	9.8	2.5	1.3	8.6	1.7	1.7	1	1	0	1	1	1	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|479326094|ref|YP_007866149.1|	-	1.5	8.5	5.8	6.1	6.6	0.2	2.4	1	1	1	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|479326094|ref|YP_007866149.1|	-	2	8.0	6.0	6	6.5	0.2	2.4	1	1	1	2	2	2	0	zinc-ribbon	domain
RNA_pol_L_2	PF13656.1	gi|479326095|ref|YP_007866150.1|	-	7e-21	73.4	0.0	8.1e-21	73.2	0.0	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
RNA_pol_L	PF01193.19	gi|479326095|ref|YP_007866150.1|	-	3.3e-11	42.1	0.0	4.1e-11	41.8	0.0	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
TFIIS_C	PF01096.13	gi|479326097|ref|YP_007866152.1|	-	3.6e-22	77.6	8.8	2.6e-21	74.9	1.3	2.2	2	0	0	2	2	2	1	Transcription	factor	S-II	(TFIIS)
DUF2387	PF09526.5	gi|479326097|ref|YP_007866152.1|	-	3.2e-06	26.9	2.9	0.027	14.3	0.2	2.2	2	0	0	2	2	2	2	Probable	metal-binding	protein	(DUF2387)
Zn_Tnp_IS1595	PF12760.2	gi|479326097|ref|YP_007866152.1|	-	8.6e-05	22.2	6.9	0.0016	18.2	1.3	2.4	2	1	0	2	2	2	1	Transposase	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|479326097|ref|YP_007866152.1|	-	0.00031	19.9	3.5	0.44	9.8	0.1	2.9	2	1	0	2	2	2	2	TFIIB	zinc-binding
Zn-ribbon_8	PF09723.5	gi|479326097|ref|YP_007866152.1|	-	0.0013	18.6	11.3	0.41	10.6	0.7	3.3	3	0	0	3	3	3	2	Zinc	ribbon	domain
Desulfoferrod_N	PF06397.7	gi|479326097|ref|YP_007866152.1|	-	0.0017	17.7	2.3	1	8.8	0.1	2.3	2	0	0	2	2	2	2	Desulfoferrodoxin,	N-terminal	domain
zinc_ribbon_4	PF13717.1	gi|479326097|ref|YP_007866152.1|	-	0.003	17.2	9.7	0.16	11.6	0.3	3.5	3	1	0	3	3	3	1	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|479326097|ref|YP_007866152.1|	-	0.0032	17.0	9.5	0.12	11.9	0.2	3.5	3	1	0	3	3	3	1	zinc-ribbon	domain
zf-DNA_Pol	PF08996.5	gi|479326097|ref|YP_007866152.1|	-	0.0046	16.3	1.6	0.29	10.4	0.1	2.0	1	1	1	2	2	2	1	DNA	Polymerase	alpha	zinc	finger
zf-ISL3	PF14690.1	gi|479326097|ref|YP_007866152.1|	-	0.011	15.7	3.5	1.2	9.2	0.0	3.2	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
DUF2296	PF10058.4	gi|479326097|ref|YP_007866152.1|	-	0.016	14.9	6.9	0.49	10.1	0.1	2.8	2	1	0	2	2	2	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
FAM163	PF15069.1	gi|479326097|ref|YP_007866152.1|	-	0.019	15.5	0.2	0.021	15.3	0.1	1.1	1	0	0	1	1	1	0	FAM163	family
zf-Mss51	PF13824.1	gi|479326097|ref|YP_007866152.1|	-	0.023	14.5	2.3	0.85	9.5	0.2	2.2	2	0	0	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
Zn_Tnp_IS91	PF14319.1	gi|479326097|ref|YP_007866152.1|	-	0.034	13.6	4.5	1.9	7.9	0.1	2.8	2	1	1	3	3	3	0	Transposase	zinc-binding	domain
RNA_POL_M_15KD	PF02150.11	gi|479326097|ref|YP_007866152.1|	-	0.065	12.9	0.6	0.065	12.9	0.4	3.0	3	0	0	3	3	3	0	RNA	polymerases	M/15	Kd	subunit
YhfH	PF14149.1	gi|479326097|ref|YP_007866152.1|	-	0.07	12.9	1.4	3.1	7.6	0.0	2.7	2	0	0	2	2	2	0	YhfH-like	protein
OrfB_Zn_ribbon	PF07282.6	gi|479326097|ref|YP_007866152.1|	-	0.07	12.8	6.8	3.6	7.3	0.2	2.8	2	1	1	3	3	3	0	Putative	transposase	DNA-binding	domain
zf-CHY	PF05495.7	gi|479326097|ref|YP_007866152.1|	-	0.074	13.2	3.8	0.65	10.1	2.6	2.1	1	1	0	1	1	1	0	CHY	zinc	finger
C1_4	PF07975.7	gi|479326097|ref|YP_007866152.1|	-	0.099	12.6	6.7	10	6.2	0.2	3.0	2	1	1	3	3	3	0	TFIIH	C1-like	domain
zf-UBR	PF02207.15	gi|479326097|ref|YP_007866152.1|	-	0.11	12.2	2.5	4.6	7.0	0.1	2.8	3	0	0	3	3	3	0	Putative	zinc	finger	in	N-recognin	(UBR	box)
Terminase_GpA	PF05876.7	gi|479326097|ref|YP_007866152.1|	-	0.11	10.8	3.2	0.032	12.5	0.6	1.4	1	1	0	1	1	1	0	Phage	terminase	large	subunit	(GpA)
Rep_fac-A_C	PF08646.5	gi|479326097|ref|YP_007866152.1|	-	0.11	12.1	0.2	0.11	12.1	0.1	2.2	1	1	0	2	2	2	0	Replication	factor-A	C	terminal	domain
zf-ribbon_3	PF13248.1	gi|479326097|ref|YP_007866152.1|	-	0.25	10.6	8.6	8.7	5.6	0.2	3.2	3	0	0	3	3	3	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|479326097|ref|YP_007866152.1|	-	0.26	10.8	11.5	3.9	7.0	0.4	3.3	3	0	0	3	3	3	0	zinc-ribbon	domain
HypA	PF01155.14	gi|479326097|ref|YP_007866152.1|	-	0.27	10.9	4.2	0.27	10.9	0.4	2.1	1	1	1	2	2	2	0	Hydrogenase	expression/synthesis	hypA	family
DZR	PF12773.2	gi|479326097|ref|YP_007866152.1|	-	0.49	10.2	8.5	5.8	6.8	2.2	2.7	1	1	1	2	2	2	0	Double	zinc	ribbon
eIF-5_eIF-2B	PF01873.12	gi|479326097|ref|YP_007866152.1|	-	0.58	9.8	3.8	0.89	9.2	0.1	2.3	2	1	0	2	2	2	0	Domain	found	in	IF2B/IF5
Lar_restr_allev	PF14354.1	gi|479326097|ref|YP_007866152.1|	-	0.67	10.3	5.3	8	6.8	0.7	2.7	1	1	1	2	2	2	0	Restriction	alleviation	protein	Lar
zf-RING_4	PF14570.1	gi|479326097|ref|YP_007866152.1|	-	0.67	9.5	4.4	14	5.3	0.1	3.0	3	0	0	3	3	3	0	RING/Ubox	like	zinc-binding	domain
Fer4_8	PF13183.1	gi|479326097|ref|YP_007866152.1|	-	0.73	9.9	6.1	20	5.2	4.3	2.3	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
DNA_RNApol_7kD	PF03604.8	gi|479326097|ref|YP_007866152.1|	-	1	8.8	7.3	4.5	6.8	0.1	2.9	3	0	0	3	3	3	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
C1_3	PF07649.7	gi|479326097|ref|YP_007866152.1|	-	1.1	9.3	6.6	5.7	7.0	0.1	2.6	3	0	0	3	3	2	0	C1-like	domain
DUF2082	PF09855.4	gi|479326097|ref|YP_007866152.1|	-	1.2	9.0	6.1	13	5.7	0.2	3.1	3	0	0	3	3	3	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
Zn_Tnp_IS1	PF03811.8	gi|479326097|ref|YP_007866152.1|	-	1.2	8.7	7.9	2.4	7.7	0.0	3.0	3	0	0	3	3	3	0	InsA	N-terminal	domain
zf-H2C2_2	PF13465.1	gi|479326097|ref|YP_007866152.1|	-	2.9	8.3	15.3	1.6	9.1	0.5	3.2	3	1	0	3	3	3	0	Zinc-finger	double	domain
CpXC	PF14353.1	gi|479326097|ref|YP_007866152.1|	-	3	7.8	7.3	1.5	8.7	0.2	2.9	2	1	0	2	2	2	0	CpXC	protein
zf-TFIIB	PF13453.1	gi|479326097|ref|YP_007866152.1|	-	3.1	7.0	7.2	33	3.7	3.1	2.7	2	1	0	2	2	2	0	Transcription	factor	zinc-finger
DUF3797	PF12677.2	gi|479326097|ref|YP_007866152.1|	-	3.8	7.2	7.9	5.8	6.6	0.2	3.1	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF3797)
Rubredoxin	PF00301.15	gi|479326097|ref|YP_007866152.1|	-	3.9	7.4	9.8	7.9	6.4	0.1	3.3	3	0	0	3	3	3	0	Rubredoxin
Tnp_zf-ribbon_2	PF13842.1	gi|479326097|ref|YP_007866152.1|	-	5	7.6	11.4	4	7.9	0.2	3.0	2	1	0	2	2	2	0	DDE_Tnp_1-like	zinc-ribbon
Ribosomal_L44	PF00935.14	gi|479326097|ref|YP_007866152.1|	-	7.2	6.6	7.4	18	5.4	0.4	2.7	3	1	0	3	3	2	0	Ribosomal	protein	L44
IBR	PF01485.16	gi|479326097|ref|YP_007866152.1|	-	7.8	6.4	8.3	16	5.4	0.2	3.0	2	1	0	2	2	2	0	IBR	domain
Sugar_tr	PF00083.19	gi|479326098|ref|YP_007866153.1|	-	3.4e-42	144.5	22.5	4.3e-42	144.2	15.6	1.1	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|479326098|ref|YP_007866153.1|	-	1.6e-27	96.1	55.4	9.5e-25	87.0	15.7	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
DUF1129	PF06570.6	gi|479326098|ref|YP_007866153.1|	-	0.29	10.4	6.7	0.19	11.0	2.1	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1129)
ABC_tran	PF00005.22	gi|479326100|ref|YP_007866155.1|	-	2.5e-38	131.4	0.1	3.5e-21	75.9	0.0	2.5	2	0	0	2	2	2	2	ABC	transporter
SMC_N	PF02463.14	gi|479326100|ref|YP_007866155.1|	-	1.7e-13	50.3	9.5	8.8e-06	25.0	0.1	3.7	3	1	0	3	3	3	3	RecF/RecN/SMC	N	terminal	domain
RLI	PF04068.10	gi|479326100|ref|YP_007866155.1|	-	1.5e-12	46.9	1.7	3.9e-12	45.5	1.2	1.8	1	0	0	1	1	1	1	Possible	Fer4-like	domain	in	RNase	L	inhibitor,	RLI
AAA_21	PF13304.1	gi|479326100|ref|YP_007866155.1|	-	1.9e-12	47.7	11.2	5.9e-07	29.7	1.4	4.0	2	2	1	3	3	3	3	AAA	domain
Fer4	PF00037.22	gi|479326100|ref|YP_007866155.1|	-	8.5e-08	31.4	5.7	8.5e-08	31.4	4.0	2.7	3	0	0	3	3	2	1	4Fe-4S	binding	domain
AAA	PF00004.24	gi|479326100|ref|YP_007866155.1|	-	2.2e-07	31.1	0.2	0.019	15.1	0.0	3.0	2	1	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_14	PF13173.1	gi|479326100|ref|YP_007866155.1|	-	3.8e-06	26.8	4.8	0.0095	15.8	0.1	3.4	3	1	0	3	3	2	2	AAA	domain
AAA_17	PF13207.1	gi|479326100|ref|YP_007866155.1|	-	1.2e-05	26.1	8.2	0.087	13.6	0.8	3.8	2	2	0	2	2	2	2	AAA	domain
Fer4_7	PF12838.2	gi|479326100|ref|YP_007866155.1|	-	2.1e-05	24.8	20.0	0.00012	22.3	1.2	2.2	1	1	2	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|479326100|ref|YP_007866155.1|	-	2.2e-05	24.1	3.8	2.2e-05	24.1	2.7	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|479326100|ref|YP_007866155.1|	-	2.5e-05	23.9	3.7	2.5e-05	23.9	2.6	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
MobB	PF03205.9	gi|479326100|ref|YP_007866155.1|	-	4.1e-05	23.2	1.5	0.19	11.4	0.0	3.0	2	0	0	2	2	2	2	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Fer4_10	PF13237.1	gi|479326100|ref|YP_007866155.1|	-	0.0001	21.9	21.5	0.00052	19.7	1.5	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
AAA_22	PF13401.1	gi|479326100|ref|YP_007866155.1|	-	0.00017	21.7	4.7	0.52	10.4	0.0	3.3	2	2	0	2	2	2	2	AAA	domain
NACHT	PF05729.7	gi|479326100|ref|YP_007866155.1|	-	0.00018	21.1	0.4	0.14	11.8	0.0	2.7	2	0	0	2	2	2	1	NACHT	domain
Fer4_21	PF14697.1	gi|479326100|ref|YP_007866155.1|	-	0.00025	20.8	8.5	0.00052	19.8	5.9	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
AAA_24	PF13479.1	gi|479326100|ref|YP_007866155.1|	-	0.00045	19.8	1.2	0.51	9.8	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
Fer4_16	PF13484.1	gi|479326100|ref|YP_007866155.1|	-	0.00047	20.8	2.4	0.0014	19.3	0.0	2.3	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
RNA_helicase	PF00910.17	gi|479326100|ref|YP_007866155.1|	-	0.00062	19.9	0.1	0.52	10.5	0.0	2.7	2	1	0	2	2	2	1	RNA	helicase
AAA_16	PF13191.1	gi|479326100|ref|YP_007866155.1|	-	0.00082	19.4	0.2	0.17	11.8	0.0	2.6	3	0	0	3	3	2	1	AAA	ATPase	domain
DUF258	PF03193.11	gi|479326100|ref|YP_007866155.1|	-	0.00089	18.4	0.3	0.99	8.5	0.0	2.5	2	0	0	2	2	2	2	Protein	of	unknown	function,	DUF258
Fer4_9	PF13187.1	gi|479326100|ref|YP_007866155.1|	-	0.0009	19.4	8.2	0.0029	17.8	5.7	1.9	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Miro	PF08477.8	gi|479326100|ref|YP_007866155.1|	-	0.0022	18.4	1.5	1.3	9.5	0.0	3.6	4	0	0	4	4	3	1	Miro-like	protein
AAA_25	PF13481.1	gi|479326100|ref|YP_007866155.1|	-	0.0027	17.1	0.8	0.31	10.4	0.0	3.4	3	1	0	3	3	3	1	AAA	domain
AAA_18	PF13238.1	gi|479326100|ref|YP_007866155.1|	-	0.0032	17.7	9.2	0.7	10.1	0.2	3.6	2	2	0	2	2	2	2	AAA	domain
AAA_23	PF13476.1	gi|479326100|ref|YP_007866155.1|	-	0.0063	16.8	13.2	0.29	11.4	3.2	2.6	1	1	1	2	2	2	2	AAA	domain
VirE	PF05272.6	gi|479326100|ref|YP_007866155.1|	-	0.0064	15.9	0.0	1	8.8	0.0	2.4	2	0	0	2	2	2	1	Virulence-associated	protein	E
NB-ARC	PF00931.17	gi|479326100|ref|YP_007866155.1|	-	0.0065	15.3	5.6	0.62	8.8	0.2	2.7	3	0	0	3	3	2	2	NB-ARC	domain
AAA_33	PF13671.1	gi|479326100|ref|YP_007866155.1|	-	0.0066	16.3	0.4	2.4	8.0	0.0	3.5	2	2	0	2	2	2	1	AAA	domain
RuvB_N	PF05496.7	gi|479326100|ref|YP_007866155.1|	-	0.007	15.4	0.3	0.93	8.4	0.0	2.4	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_29	PF13555.1	gi|479326100|ref|YP_007866155.1|	-	0.0092	15.4	0.2	1.9	8.0	0.0	2.4	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
Fer4_3	PF12798.2	gi|479326100|ref|YP_007866155.1|	-	0.02	15.4	4.8	0.02	15.4	3.4	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
UPF0079	PF02367.12	gi|479326100|ref|YP_007866155.1|	-	0.025	14.1	0.5	0.41	10.2	0.0	2.4	2	0	0	2	2	2	0	Uncharacterised	P-loop	hydrolase	UPF0079
T2SE	PF00437.15	gi|479326100|ref|YP_007866155.1|	-	0.026	13.4	0.4	0.79	8.5	0.0	2.3	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
Fer4_15	PF13459.1	gi|479326100|ref|YP_007866155.1|	-	0.041	14.4	1.4	0.13	12.8	0.9	1.8	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
SbcCD_C	PF13558.1	gi|479326100|ref|YP_007866155.1|	-	0.049	13.5	0.2	2.5	8.0	0.0	3.2	2	2	0	2	2	2	0	Putative	exonuclease	SbcCD,	C	subunit
KAP_NTPase	PF07693.9	gi|479326100|ref|YP_007866155.1|	-	0.051	12.5	0.3	2.7	6.8	0.1	2.6	2	1	0	2	2	2	0	KAP	family	P-loop	domain
NTPase_1	PF03266.10	gi|479326100|ref|YP_007866155.1|	-	0.063	12.9	3.9	7.6	6.2	0.2	3.4	4	0	0	4	4	3	0	NTPase
Fer4_8	PF13183.1	gi|479326100|ref|YP_007866155.1|	-	0.16	12.0	5.4	0.063	13.3	1.1	1.8	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_11	PF13247.1	gi|479326100|ref|YP_007866155.1|	-	0.21	11.4	2.1	0.37	10.7	1.4	1.3	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
Arch_ATPase	PF01637.13	gi|479326100|ref|YP_007866155.1|	-	0.26	10.9	12.0	3.5	7.2	0.1	3.1	2	2	0	2	2	2	0	Archaeal	ATPase
AAA_19	PF13245.1	gi|479326100|ref|YP_007866155.1|	-	0.28	10.9	0.8	7.9	6.3	0.1	2.5	2	0	0	2	2	2	0	Part	of	AAA	domain
Fer4_4	PF12800.2	gi|479326100|ref|YP_007866155.1|	-	0.43	11.0	13.2	0.06	13.7	2.1	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
AAA_13	PF13166.1	gi|479326100|ref|YP_007866155.1|	-	0.44	8.9	6.4	4.8	5.5	0.0	3.6	3	1	0	4	4	4	0	AAA	domain
SRP54	PF00448.17	gi|479326100|ref|YP_007866155.1|	-	0.63	9.4	3.1	19	4.6	0.0	2.8	3	0	0	3	3	2	0	SRP54-type	protein,	GTPase	domain
Fer4_17	PF13534.1	gi|479326100|ref|YP_007866155.1|	-	1.1	9.5	7.9	0.35	11.2	1.9	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
AAA_10	PF12846.2	gi|479326100|ref|YP_007866155.1|	-	1.5	8.1	4.2	13	5.1	0.0	2.9	4	0	0	4	4	2	0	AAA-like	domain
DUF87	PF01935.12	gi|479326100|ref|YP_007866155.1|	-	1.6	8.5	8.7	1.6	8.4	0.0	3.4	3	1	0	3	3	2	0	Domain	of	unknown	function	DUF87
Fer4_18	PF13746.1	gi|479326100|ref|YP_007866155.1|	-	2.4	8.6	10.5	0.63	10.5	3.1	2.4	1	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|479326100|ref|YP_007866155.1|	-	3.1	8.2	6.7	0.29	11.5	1.1	1.9	2	0	0	2	2	1	0	4Fe-4S	single	cluster	domain
FBPase_3	PF01950.11	gi|479326101|ref|YP_007866156.1|	-	8.7e-185	613.8	0.0	1e-184	613.7	0.0	1.0	1	0	0	1	1	1	1	Fructose-1,6-bisphosphatase
Ribosomal_S17e	PF00833.13	gi|479326102|ref|YP_007866157.1|	-	6.8e-15	54.9	3.7	7.8e-15	54.7	2.6	1.0	1	0	0	1	1	1	1	Ribosomal	S17
DUF3538	PF12057.3	gi|479326102|ref|YP_007866157.1|	-	0.076	12.6	0.0	0.12	11.9	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3538)
DUF4407	PF14362.1	gi|479326102|ref|YP_007866157.1|	-	0.12	11.3	2.0	0.14	11.0	1.4	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
Urm1	PF09138.6	gi|479326103|ref|YP_007866158.1|	-	4.2e-07	29.9	0.6	4.7e-07	29.8	0.4	1.2	1	0	0	1	1	1	1	Urm1	(Ubiquitin	related	modifier)
ThiS	PF02597.15	gi|479326103|ref|YP_007866158.1|	-	0.00053	20.3	0.1	0.00066	20.0	0.1	1.3	1	1	0	1	1	1	1	ThiS	family
DUF87	PF01935.12	gi|479326105|ref|YP_007866160.1|	-	9e-33	114.0	2.5	9e-33	114.0	1.7	2.1	2	1	0	2	2	2	1	Domain	of	unknown	function	DUF87
AAA_10	PF12846.2	gi|479326105|ref|YP_007866160.1|	-	5.2e-27	95.0	3.0	1.2e-26	93.8	2.1	1.6	1	1	0	1	1	1	1	AAA-like	domain
DUF853	PF05872.7	gi|479326105|ref|YP_007866160.1|	-	6.5e-14	51.1	0.4	1.2e-06	27.1	0.0	2.1	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
Zot	PF05707.7	gi|479326105|ref|YP_007866160.1|	-	1e-09	38.1	0.1	5.5e-07	29.2	0.0	2.3	2	0	0	2	2	2	2	Zonular	occludens	toxin	(Zot)
TrwB_AAD_bind	PF10412.4	gi|479326105|ref|YP_007866160.1|	-	1.4e-07	30.5	0.1	2.4e-07	29.7	0.0	1.4	1	0	0	1	1	1	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
PhoH	PF02562.11	gi|479326105|ref|YP_007866160.1|	-	4.7e-07	29.2	0.9	0.00077	18.7	0.0	2.4	2	0	0	2	2	2	2	PhoH-like	protein
AAA_22	PF13401.1	gi|479326105|ref|YP_007866160.1|	-	0.00039	20.5	0.2	0.98	9.5	0.0	2.8	3	0	0	3	3	2	2	AAA	domain
T4SS-DNA_transf	PF02534.9	gi|479326105|ref|YP_007866160.1|	-	0.00054	18.6	1.0	0.062	11.8	0.1	2.3	2	0	0	2	2	2	2	Type	IV	secretory	system	Conjugative	DNA	transfer
AAA_17	PF13207.1	gi|479326105|ref|YP_007866160.1|	-	0.0008	20.2	0.1	0.0035	18.1	0.0	2.2	2	0	0	2	2	1	1	AAA	domain
TraG-D_C	PF12696.2	gi|479326105|ref|YP_007866160.1|	-	0.0027	17.5	0.0	0.0051	16.6	0.0	1.4	1	0	0	1	1	1	1	TraM	recognition	site	of	TraD	and	TraG
DEAD	PF00270.24	gi|479326105|ref|YP_007866160.1|	-	0.004	16.6	0.0	0.42	10.0	0.0	2.4	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
IPT	PF01745.11	gi|479326105|ref|YP_007866160.1|	-	0.0082	15.3	0.0	0.02	14.0	0.0	1.6	1	0	0	1	1	1	1	Isopentenyl	transferase
KTI12	PF08433.5	gi|479326105|ref|YP_007866160.1|	-	0.0095	15.1	0.1	0.14	11.3	0.0	2.3	2	0	0	2	2	2	1	Chromatin	associated	protein	KTI12
CbiA	PF01656.18	gi|479326105|ref|YP_007866160.1|	-	0.01	15.2	0.0	0.024	14.0	0.0	1.7	1	0	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_18	PF13238.1	gi|479326105|ref|YP_007866160.1|	-	0.016	15.5	3.4	0.054	13.8	0.6	2.8	2	1	0	2	2	2	0	AAA	domain
AAA_30	PF13604.1	gi|479326105|ref|YP_007866160.1|	-	0.022	14.3	0.0	0.6	9.6	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|479326105|ref|YP_007866160.1|	-	0.03	13.7	0.0	0.14	11.5	0.0	1.9	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
MobB	PF03205.9	gi|479326105|ref|YP_007866160.1|	-	0.035	13.8	0.1	0.1	12.3	0.0	1.8	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
LpxK	PF02606.9	gi|479326105|ref|YP_007866160.1|	-	0.038	12.9	0.0	0.061	12.2	0.0	1.2	1	0	0	1	1	1	0	Tetraacyldisaccharide-1-P	4'-kinase
ABC_tran	PF00005.22	gi|479326105|ref|YP_007866160.1|	-	0.072	13.3	0.2	0.92	9.8	0.0	2.7	2	1	1	3	3	3	0	ABC	transporter
APS_kinase	PF01583.15	gi|479326105|ref|YP_007866160.1|	-	0.074	12.7	0.0	0.15	11.6	0.0	1.4	1	0	0	1	1	1	0	Adenylylsulphate	kinase
Cpn60_TCP1	PF00118.19	gi|479326106|ref|YP_007866161.1|	-	1.8e-165	551.2	8.3	2.1e-165	551.0	5.8	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
TF_Zn_Ribbon	PF08271.7	gi|479326107|ref|YP_007866162.1|	-	3.4e-12	45.4	3.7	6.1e-12	44.6	2.6	1.4	1	0	0	1	1	1	1	TFIIB	zinc-binding
Lar_restr_allev	PF14354.1	gi|479326107|ref|YP_007866162.1|	-	0.00096	19.4	0.2	0.0015	18.7	0.1	1.3	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
OrfB_Zn_ribbon	PF07282.6	gi|479326107|ref|YP_007866162.1|	-	0.0065	16.1	0.4	0.014	15.0	0.3	1.5	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Ribosomal_S27e	PF01667.12	gi|479326107|ref|YP_007866162.1|	-	0.0076	15.7	0.6	0.013	15.0	0.4	1.4	1	0	0	1	1	1	1	Ribosomal	protein	S27
A2L_zn_ribbon	PF08792.5	gi|479326107|ref|YP_007866162.1|	-	0.0081	15.5	3.4	0.0081	15.5	2.4	2.3	3	0	0	3	3	3	1	A2L	zinc	ribbon	domain
RRN7	PF11781.3	gi|479326107|ref|YP_007866162.1|	-	0.016	14.6	0.1	0.025	14.0	0.1	1.3	1	0	0	1	1	1	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
DUF2318	PF10080.4	gi|479326107|ref|YP_007866162.1|	-	0.083	12.6	0.5	0.14	11.9	0.3	1.5	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2318)
Prim_Zn_Ribbon	PF08273.7	gi|479326107|ref|YP_007866162.1|	-	0.13	12.3	4.6	0.33	11.0	3.2	1.7	1	1	0	1	1	1	0	Zinc-binding	domain	of	primase-helicase
zf-ribbon_3	PF13248.1	gi|479326107|ref|YP_007866162.1|	-	0.19	10.9	5.9	0.53	9.5	4.1	1.7	1	1	0	1	1	1	0	zinc-ribbon	domain
TFIIS_C	PF01096.13	gi|479326107|ref|YP_007866162.1|	-	0.36	10.4	1.6	1.4	8.6	0.0	2.1	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
Auto_anti-p27	PF06677.7	gi|479326107|ref|YP_007866162.1|	-	0.38	10.5	1.4	0.79	9.5	1.0	1.6	1	1	0	1	1	1	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
Zn_Tnp_IS1595	PF12760.2	gi|479326107|ref|YP_007866162.1|	-	0.74	9.6	3.5	2.4	8.0	0.1	2.4	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|479326107|ref|YP_007866162.1|	-	1.3	8.6	5.0	4.3	6.9	0.6	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
tRNA_int_endo	PF01974.12	gi|479326108|ref|YP_007866163.1|	-	1.7e-09	37.3	0.7	2.9e-09	36.6	0.2	1.5	2	0	0	2	2	2	1	tRNA	intron	endonuclease,	catalytic	C-terminal	domain
Sen15	PF09631.5	gi|479326108|ref|YP_007866163.1|	-	4.3e-05	23.6	1.0	7.4e-05	22.9	0.4	1.5	1	1	1	2	2	2	1	Sen15	protein
DUF3997	PF13162.1	gi|479326108|ref|YP_007866163.1|	-	0.045	13.5	1.6	0.079	12.7	0.8	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3997)
tRNA-synt_His	PF13393.1	gi|479326109|ref|YP_007866164.1|	-	7.6e-69	232.1	0.0	9.2e-69	231.8	0.0	1.1	1	0	0	1	1	1	1	Histidyl-tRNA	synthetase
tRNA-synt_2b	PF00587.20	gi|479326109|ref|YP_007866164.1|	-	1.5e-24	86.5	0.1	2.7e-24	85.6	0.0	1.4	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|479326109|ref|YP_007866164.1|	-	2.2e-11	43.5	0.3	8.5e-11	41.6	0.2	2.0	1	0	0	1	1	1	1	Anticodon	binding	domain
tRNA-synt_2d	PF01409.15	gi|479326109|ref|YP_007866164.1|	-	3.2e-08	33.0	0.0	1.2e-07	31.2	0.0	2.0	2	0	0	2	2	2	1	tRNA	synthetases	class	II	core	domain	(F)
Proteasome	PF00227.21	gi|479326110|ref|YP_007866165.1|	-	9.8e-51	171.7	0.2	1.1e-50	171.5	0.1	1.0	1	0	0	1	1	1	1	Proteasome	subunit
TRF	PF08558.5	gi|479326111|ref|YP_007866166.1|	-	0.00035	19.9	0.1	0.00058	19.2	0.0	1.3	1	1	0	1	1	1	1	Telomere	repeat	binding	factor	(TRF)
2-ph_phosp	PF04029.9	gi|479326111|ref|YP_007866166.1|	-	0.00067	18.6	0.1	0.00096	18.1	0.0	1.2	1	0	0	1	1	1	1	2-phosphosulpholactate	phosphatase
Flagellin_IN	PF07196.8	gi|479326111|ref|YP_007866166.1|	-	0.1	12.5	0.4	0.2	11.6	0.3	1.5	1	0	0	1	1	1	0	Flagellin	hook	IN	motif
Lsm_C	PF14894.1	gi|479326112|ref|YP_007866167.1|	-	9.4e-31	105.1	0.2	1.5e-30	104.4	0.1	1.3	1	0	0	1	1	1	1	Lsm	C-terminal
LSM	PF01423.17	gi|479326112|ref|YP_007866167.1|	-	1.5e-05	24.4	0.6	3.8e-05	23.1	0.4	1.7	1	1	0	1	1	1	1	LSM	domain
SM-ATX	PF14438.1	gi|479326112|ref|YP_007866167.1|	-	0.0015	18.4	0.0	0.0022	17.8	0.0	1.3	1	0	0	1	1	1	1	Ataxin	2	SM	domain
TGT	PF01702.13	gi|479326113|ref|YP_007866168.1|	-	4e-45	153.9	0.0	5.9e-45	153.3	0.0	1.2	1	0	0	1	1	1	1	Queuine	tRNA-ribosyltransferase
PAC2	PF09754.4	gi|479326114|ref|YP_007866169.1|	-	1e-39	136.6	0.0	1.3e-39	136.3	0.0	1.0	1	0	0	1	1	1	1	PAC2	family
PUA	PF01472.15	gi|479326115|ref|YP_007866170.1|	-	3.7e-20	71.4	2.2	4.7e-20	71.0	1.5	1.1	1	0	0	1	1	1	1	PUA	domain
TGT_C2	PF14810.1	gi|479326115|ref|YP_007866170.1|	-	0.0034	17.1	0.0	0.0093	15.7	0.0	1.7	2	0	0	2	2	2	1	Patch-forming	domain	C2	of	tRNA-guanine	transglycosylase
UPF0113	PF03657.8	gi|479326115|ref|YP_007866170.1|	-	0.0084	15.7	0.1	0.0093	15.6	0.1	1.1	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0113)
Antitoxin-MazE	PF04014.13	gi|479326115|ref|YP_007866170.1|	-	0.01	15.5	1.7	0.13	11.9	1.2	2.3	1	1	0	1	1	1	0	Antidote-toxin	recognition	MazE
ART	PF01129.13	gi|479326115|ref|YP_007866170.1|	-	0.1	11.6	0.0	0.14	11.2	0.0	1.2	1	0	0	1	1	1	0	NAD:arginine	ADP-ribosyltransferase
AAA	PF00004.24	gi|479326116|ref|YP_007866171.1|	-	9.2e-43	145.6	0.2	2.1e-42	144.4	0.0	1.7	2	0	0	2	2	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_2	PF07724.9	gi|479326116|ref|YP_007866171.1|	-	6.8e-07	29.3	0.0	2e-06	27.8	0.0	1.8	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
AAA_5	PF07728.9	gi|479326116|ref|YP_007866171.1|	-	2e-06	27.5	0.1	1.1e-05	25.1	0.1	2.1	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_22	PF13401.1	gi|479326116|ref|YP_007866171.1|	-	2.3e-06	27.7	0.2	8.5e-05	22.7	0.1	2.9	2	1	0	2	2	2	1	AAA	domain
RuvB_N	PF05496.7	gi|479326116|ref|YP_007866171.1|	-	7.4e-06	25.1	0.0	1.8e-05	23.9	0.0	1.6	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_16	PF13191.1	gi|479326116|ref|YP_007866171.1|	-	8.8e-06	25.8	0.0	5.2e-05	23.3	0.0	1.9	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_14	PF13173.1	gi|479326116|ref|YP_007866171.1|	-	4.5e-05	23.3	0.0	0.00031	20.6	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|479326116|ref|YP_007866171.1|	-	4.5e-05	24.2	0.4	0.00017	22.4	0.1	2.2	2	1	0	2	2	1	1	AAA	domain
AAA_28	PF13521.1	gi|479326116|ref|YP_007866171.1|	-	0.00048	20.1	0.0	0.00095	19.1	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
DUF815	PF05673.8	gi|479326116|ref|YP_007866171.1|	-	0.00057	18.8	0.0	0.0013	17.7	0.0	1.7	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
Zeta_toxin	PF06414.7	gi|479326116|ref|YP_007866171.1|	-	0.00062	18.9	0.0	0.0014	17.8	0.0	1.5	1	0	0	1	1	1	1	Zeta	toxin
Mg_chelatase	PF01078.16	gi|479326116|ref|YP_007866171.1|	-	0.00079	18.6	0.0	0.002	17.2	0.0	1.7	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
AAA_24	PF13479.1	gi|479326116|ref|YP_007866171.1|	-	0.00089	18.8	0.0	0.002	17.7	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.12	gi|479326116|ref|YP_007866171.1|	-	0.001	18.5	0.0	0.0021	17.5	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_33	PF13671.1	gi|479326116|ref|YP_007866171.1|	-	0.0019	18.1	0.0	0.0037	17.1	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
RNA_helicase	PF00910.17	gi|479326116|ref|YP_007866171.1|	-	0.0024	18.0	0.0	0.0059	16.7	0.0	1.7	1	0	0	1	1	1	1	RNA	helicase
TIP49	PF06068.8	gi|479326116|ref|YP_007866171.1|	-	0.0025	16.6	0.0	0.0051	15.5	0.0	1.5	1	0	0	1	1	1	1	TIP49	C-terminus
AAA_19	PF13245.1	gi|479326116|ref|YP_007866171.1|	-	0.0025	17.5	0.1	0.0058	16.3	0.0	1.7	1	0	0	1	1	1	1	Part	of	AAA	domain
Sigma54_activ_2	PF14532.1	gi|479326116|ref|YP_007866171.1|	-	0.0051	16.8	0.0	0.019	14.9	0.0	2.0	1	1	0	1	1	1	1	Sigma-54	interaction	domain
Arch_ATPase	PF01637.13	gi|479326116|ref|YP_007866171.1|	-	0.0053	16.4	0.3	0.024	14.3	0.0	2.2	2	1	0	2	2	1	1	Archaeal	ATPase
AAA_25	PF13481.1	gi|479326116|ref|YP_007866171.1|	-	0.0072	15.7	0.7	0.04	13.3	0.1	2.2	1	1	1	2	2	2	1	AAA	domain
Sigma54_activat	PF00158.21	gi|479326116|ref|YP_007866171.1|	-	0.0077	15.7	0.1	0.051	13.0	0.1	2.4	1	1	0	1	1	1	1	Sigma-54	interaction	domain
NACHT	PF05729.7	gi|479326116|ref|YP_007866171.1|	-	0.0086	15.7	0.1	0.063	12.9	0.0	2.2	2	0	0	2	2	2	1	NACHT	domain
Bac_DnaA	PF00308.13	gi|479326116|ref|YP_007866171.1|	-	0.01	15.5	0.0	0.041	13.5	0.0	2.0	3	0	0	3	3	1	0	Bacterial	dnaA	protein
AAA_18	PF13238.1	gi|479326116|ref|YP_007866171.1|	-	0.019	15.2	0.0	0.051	13.8	0.0	1.9	1	0	0	1	1	1	0	AAA	domain
NB-ARC	PF00931.17	gi|479326116|ref|YP_007866171.1|	-	0.03	13.1	0.0	0.088	11.6	0.0	1.7	2	0	0	2	2	2	0	NB-ARC	domain
Parvo_NS1	PF01057.12	gi|479326116|ref|YP_007866171.1|	-	0.032	13.1	0.0	0.063	12.1	0.0	1.4	1	0	0	1	1	1	0	Parvovirus	non-structural	protein	NS1
PhoH	PF02562.11	gi|479326116|ref|YP_007866171.1|	-	0.043	13.0	0.1	0.14	11.3	0.0	1.8	1	0	0	1	1	1	0	PhoH-like	protein
DUF16	PF01519.11	gi|479326116|ref|YP_007866171.1|	-	0.052	13.7	2.6	1	9.6	0.1	2.7	3	0	0	3	3	2	0	Protein	of	unknown	function	DUF16
cobW	PF02492.14	gi|479326116|ref|YP_007866171.1|	-	0.082	12.3	0.0	0.16	11.4	0.0	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
ABC_tran	PF00005.22	gi|479326116|ref|YP_007866171.1|	-	0.099	12.9	0.3	0.71	10.1	0.0	2.4	2	1	1	3	3	2	0	ABC	transporter
KaiC	PF06745.8	gi|479326116|ref|YP_007866171.1|	-	0.1	11.6	6.0	0.29	10.2	0.0	3.3	3	1	1	4	4	4	0	KaiC
bZIP_1	PF00170.16	gi|479326116|ref|YP_007866171.1|	-	0.15	12.0	5.0	0.24	11.3	1.8	2.3	2	0	0	2	2	2	0	bZIP	transcription	factor
TMF_TATA_bd	PF12325.3	gi|479326116|ref|YP_007866171.1|	-	0.15	11.7	8.4	0.64	9.7	0.2	3.2	3	1	0	3	3	3	0	TATA	element	modulatory	factor	1	TATA	binding
NTPase_1	PF03266.10	gi|479326116|ref|YP_007866171.1|	-	0.44	10.2	5.3	8.7	6.0	0.1	3.6	2	2	2	4	4	4	0	NTPase
AAA_23	PF13476.1	gi|479326116|ref|YP_007866171.1|	-	0.95	9.7	7.7	2.9	8.1	0.0	3.5	3	1	1	4	4	3	0	AAA	domain
TSC22	PF01166.13	gi|479326116|ref|YP_007866171.1|	-	1.4	8.9	6.2	2.5	8.1	1.1	2.8	2	0	0	2	2	2	0	TSC-22/dip/bun	family
FlaC_arch	PF05377.6	gi|479326116|ref|YP_007866171.1|	-	2.6	8.0	8.8	0.64	9.9	0.9	2.8	3	0	0	3	3	2	0	Flagella	accessory	protein	C	(FlaC)
HTH_3	PF01381.17	gi|479326117|ref|YP_007866172.1|	-	5.6e-12	45.3	1.7	8.9e-12	44.6	1.2	1.3	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.2	gi|479326117|ref|YP_007866172.1|	-	2e-10	40.5	0.5	3.7e-10	39.6	0.4	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_31	PF13560.1	gi|479326117|ref|YP_007866172.1|	-	2.6e-08	33.9	0.0	4.3e-08	33.2	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_25	PF13413.1	gi|479326117|ref|YP_007866172.1|	-	5.1e-07	29.2	0.2	9.9e-07	28.3	0.1	1.6	1	1	0	1	1	1	1	Helix-turn-helix	domain
HTH_37	PF13744.1	gi|479326117|ref|YP_007866172.1|	-	7e-05	22.5	0.8	0.00011	21.9	0.6	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
Latrotoxin_C	PF15658.1	gi|479326117|ref|YP_007866172.1|	-	0.0013	18.5	1.5	0.0017	18.1	1.1	1.2	1	0	0	1	1	1	1	Latrotoxin	C-terminal	domain
HTH_23	PF13384.1	gi|479326117|ref|YP_007866172.1|	-	0.0037	16.8	0.0	0.0079	15.8	0.0	1.6	1	0	0	1	1	1	1	Homeodomain-like	domain
GvpH	PF05455.6	gi|479326117|ref|YP_007866172.1|	-	0.0049	16.5	0.0	0.0059	16.2	0.0	1.1	1	0	0	1	1	1	1	GvpH
Death	PF00531.17	gi|479326117|ref|YP_007866172.1|	-	0.0084	15.8	0.1	0.014	15.1	0.0	1.3	1	0	0	1	1	1	1	Death	domain
HTH_11	PF08279.7	gi|479326117|ref|YP_007866172.1|	-	0.016	14.8	0.1	0.029	13.9	0.0	1.4	1	0	0	1	1	1	0	HTH	domain
DUF1041	PF06292.12	gi|479326117|ref|YP_007866172.1|	-	0.021	14.9	0.3	0.036	14.2	0.2	1.3	1	0	0	1	1	1	0	Domain	of	Unknown	Function	(DUF1041)
Arc_trans_TRASH	PF08394.5	gi|479326117|ref|YP_007866172.1|	-	0.033	14.3	1.4	0.069	13.3	1.0	1.6	1	0	0	1	1	1	0	Archaeal	TRASH	domain
RPA_C	PF08784.6	gi|479326117|ref|YP_007866172.1|	-	0.037	14.4	0.1	0.057	13.8	0.0	1.3	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
HTH_26	PF13443.1	gi|479326117|ref|YP_007866172.1|	-	0.074	13.2	0.1	0.16	12.1	0.1	1.5	1	0	0	1	1	1	0	Cro/C1-type	HTH	DNA-binding	domain
DAGK_acc	PF00609.14	gi|479326117|ref|YP_007866172.1|	-	0.091	12.8	0.0	0.12	12.5	0.0	1.3	1	0	0	1	1	1	0	Diacylglycerol	kinase	accessory	domain
HTH_1	PF00126.22	gi|479326117|ref|YP_007866172.1|	-	0.12	12.0	0.2	13	5.5	0.0	2.2	2	0	0	2	2	2	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
DUF4428	PF14471.1	gi|479326117|ref|YP_007866172.1|	-	0.13	12.0	1.4	0.41	10.4	1.0	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4428)
MitMem_reg	PF13012.1	gi|479326117|ref|YP_007866172.1|	-	0.18	11.9	1.6	0.16	12.0	0.3	1.5	2	0	0	2	2	2	0	Maintenance	of	mitochondrial	structure	and	function
Relaxase	PF03432.9	gi|479326117|ref|YP_007866172.1|	-	0.27	10.5	3.1	0.34	10.2	2.2	1.1	1	0	0	1	1	1	0	Relaxase/Mobilisation	nuclease	domain
Sof1	PF04158.9	gi|479326117|ref|YP_007866172.1|	-	0.32	11.0	3.4	0.98	9.4	0.2	2.1	2	0	0	2	2	2	0	Sof1-like	domain
MMR_HSR1	PF01926.18	gi|479326118|ref|YP_007866173.1|	-	4.1e-19	68.6	0.1	7.8e-19	67.7	0.1	1.5	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.13	gi|479326118|ref|YP_007866173.1|	-	3.2e-12	45.9	0.3	7.8e-12	44.7	0.0	1.8	2	0	0	2	2	2	1	Ferrous	iron	transport	protein	B
GTP_EFTU	PF00009.22	gi|479326118|ref|YP_007866173.1|	-	4.5e-11	42.5	0.0	1e-08	34.8	0.0	2.6	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
SRPRB	PF09439.5	gi|479326118|ref|YP_007866173.1|	-	4.5e-07	29.2	0.2	4.5e-07	29.2	0.2	1.9	1	1	1	2	2	2	1	Signal	recognition	particle	receptor	beta	subunit
Arf	PF00025.16	gi|479326118|ref|YP_007866173.1|	-	4.9e-05	22.6	0.5	0.00016	21.0	0.1	2.0	2	1	0	2	2	2	1	ADP-ribosylation	factor	family
Miro	PF08477.8	gi|479326118|ref|YP_007866173.1|	-	0.00057	20.3	0.1	0.002	18.6	0.1	2.0	1	1	0	1	1	1	1	Miro-like	protein
EcKinase	PF02958.15	gi|479326118|ref|YP_007866173.1|	-	0.0022	17.1	0.1	0.0034	16.5	0.1	1.2	1	0	0	1	1	1	1	Ecdysteroid	kinase
AAA_23	PF13476.1	gi|479326118|ref|YP_007866173.1|	-	0.0023	18.2	4.0	0.0023	18.2	2.8	3.0	1	1	1	2	2	2	1	AAA	domain
Dynamin_N	PF00350.18	gi|479326118|ref|YP_007866173.1|	-	0.014	15.2	0.9	0.85	9.4	0.3	2.7	1	1	1	2	2	2	0	Dynamin	family
MobB	PF03205.9	gi|479326118|ref|YP_007866173.1|	-	0.019	14.6	0.2	0.047	13.3	0.2	1.7	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ABC_tran	PF00005.22	gi|479326118|ref|YP_007866173.1|	-	0.026	14.8	0.5	0.12	12.7	0.2	2.1	1	1	1	2	2	2	0	ABC	transporter
Trm56	PF01994.11	gi|479326119|ref|YP_007866174.1|	-	5.6e-48	161.6	0.1	7.3e-48	161.2	0.1	1.1	1	0	0	1	1	1	1	tRNA	ribose	2'-O-methyltransferase,	aTrm56
SpoU_methylase	PF00588.14	gi|479326119|ref|YP_007866174.1|	-	0.0058	16.5	0.0	0.008	16.0	0.0	1.2	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
TFIIE_alpha	PF02002.12	gi|479326120|ref|YP_007866175.1|	-	4.4e-23	80.7	4.0	4.4e-23	80.7	2.8	2.0	2	0	0	2	2	2	1	TFIIE	alpha	subunit
HTH_20	PF12840.2	gi|479326120|ref|YP_007866175.1|	-	5.6e-05	22.8	0.0	0.0001	21.9	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|479326120|ref|YP_007866175.1|	-	0.00011	21.8	0.0	0.00023	20.8	0.0	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_9	PF08221.6	gi|479326120|ref|YP_007866175.1|	-	0.00063	19.5	0.2	0.0055	16.5	0.0	2.3	3	0	0	3	3	3	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
HTH_24	PF13412.1	gi|479326120|ref|YP_007866175.1|	-	0.0011	18.3	0.1	0.002	17.4	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
Phage_rep_org_N	PF09681.5	gi|479326120|ref|YP_007866175.1|	-	0.0016	18.0	0.2	0.0039	16.7	0.0	1.8	2	0	0	2	2	2	1	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
Fe_dep_repress	PF01325.14	gi|479326120|ref|YP_007866175.1|	-	0.0021	17.9	0.0	0.0038	17.1	0.0	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_12	PF08461.5	gi|479326120|ref|YP_007866175.1|	-	0.0025	17.4	1.8	0.0033	17.1	0.1	2.0	2	0	0	2	2	2	1	Ribonuclease	R	winged-helix	domain
GntR	PF00392.16	gi|479326120|ref|YP_007866175.1|	-	0.003	16.9	0.2	0.0068	15.8	0.0	1.7	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	gntR	family
HTH_IclR	PF09339.5	gi|479326120|ref|YP_007866175.1|	-	0.0053	16.3	0.0	0.008	15.7	0.0	1.2	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
Sigma70_r3	PF04539.11	gi|479326120|ref|YP_007866175.1|	-	0.0081	16.0	0.0	0.018	14.9	0.0	1.5	1	0	0	1	1	1	1	Sigma-70	region	3
Phage_terminase	PF10668.4	gi|479326120|ref|YP_007866175.1|	-	0.0085	15.8	0.1	0.021	14.5	0.0	1.7	1	0	0	1	1	1	1	Phage	terminase	small	subunit
HTH_5	PF01022.15	gi|479326120|ref|YP_007866175.1|	-	0.0094	15.6	0.0	0.022	14.4	0.0	1.6	2	0	0	2	2	1	1	Bacterial	regulatory	protein,	arsR	family
Zn_Tnp_IS1595	PF12760.2	gi|479326120|ref|YP_007866175.1|	-	0.021	14.6	0.1	0.051	13.3	0.0	1.7	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
Rrf2	PF02082.15	gi|479326120|ref|YP_007866175.1|	-	0.028	14.5	0.0	0.047	13.8	0.0	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
LexA_DNA_bind	PF01726.11	gi|479326120|ref|YP_007866175.1|	-	0.028	13.9	0.1	0.083	12.4	0.0	1.8	2	0	0	2	2	2	0	LexA	DNA	binding	domain
HTH_36	PF13730.1	gi|479326120|ref|YP_007866175.1|	-	0.03	14.4	0.1	0.096	12.8	0.0	1.9	2	0	0	2	2	1	0	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|479326120|ref|YP_007866175.1|	-	0.031	13.9	0.1	0.031	13.9	0.1	1.8	2	0	0	2	2	2	0	HTH	domain
MarR_2	PF12802.2	gi|479326120|ref|YP_007866175.1|	-	0.036	13.7	0.0	0.059	13.0	0.0	1.3	1	0	0	1	1	1	0	MarR	family
HTH_DeoR	PF08220.7	gi|479326120|ref|YP_007866175.1|	-	0.038	13.5	1.5	0.067	12.7	0.1	2.0	2	0	0	2	2	2	0	DeoR-like	helix-turn-helix	domain
RPA_C	PF08784.6	gi|479326120|ref|YP_007866175.1|	-	0.042	14.2	0.0	0.078	13.3	0.0	1.4	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
HTH_34	PF13601.1	gi|479326120|ref|YP_007866175.1|	-	0.047	13.7	0.8	0.089	12.8	0.1	1.8	2	0	0	2	2	1	0	Winged	helix	DNA-binding	domain
PhnA_Zn_Ribbon	PF08274.7	gi|479326120|ref|YP_007866175.1|	-	0.049	13.4	0.1	1.3	8.9	0.1	2.2	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
MarR	PF01047.17	gi|479326120|ref|YP_007866175.1|	-	0.051	13.2	0.0	0.13	11.9	0.0	1.7	1	0	0	1	1	1	0	MarR	family
DUF4423	PF14394.1	gi|479326120|ref|YP_007866175.1|	-	0.054	13.0	1.6	0.072	12.6	0.0	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4423)
HTH_45	PF14947.1	gi|479326120|ref|YP_007866175.1|	-	0.057	13.2	0.8	0.13	12.1	0.1	1.9	2	0	0	2	2	2	0	Winged	helix-turn-helix
DUF2296	PF10058.4	gi|479326120|ref|YP_007866175.1|	-	0.059	13.1	0.1	0.12	12.1	0.1	1.6	1	0	0	1	1	1	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
EAP30	PF04157.11	gi|479326120|ref|YP_007866175.1|	-	0.06	12.4	0.1	0.16	11.1	0.0	1.6	2	0	0	2	2	2	0	EAP30/Vps36	family
TSKS	PF15358.1	gi|479326120|ref|YP_007866175.1|	-	0.068	11.3	0.0	0.1	10.7	0.0	1.2	1	0	0	1	1	1	0	Testis-specific	serine	kinase	substrate
TF_Zn_Ribbon	PF08271.7	gi|479326120|ref|YP_007866175.1|	-	0.12	11.7	0.8	0.43	9.9	0.3	2.2	1	1	1	2	2	2	0	TFIIB	zinc-binding
HR1	PF02185.11	gi|479326120|ref|YP_007866175.1|	-	9.6	6.0	11.4	2.1	8.1	0.3	2.7	3	0	0	3	3	3	0	Hr1	repeat
DNA_methylase	PF00145.12	gi|479326121|ref|YP_007866176.1|	-	3.7e-56	190.6	0.0	1.4e-53	182.2	0.0	2.1	1	1	0	1	1	1	1	C-5	cytosine-specific	DNA	methylase
Methyltransf_15	PF09445.5	gi|479326121|ref|YP_007866176.1|	-	0.0017	17.9	0.0	0.0025	17.3	0.0	1.4	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_26	PF13659.1	gi|479326121|ref|YP_007866176.1|	-	0.0018	18.2	0.0	0.0028	17.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|479326121|ref|YP_007866176.1|	-	0.16	11.0	0.1	0.28	10.2	0.0	1.4	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
DUF2122	PF09895.4	gi|479326122|ref|YP_007866177.1|	-	2.1e-33	114.7	0.0	2.9e-33	114.2	0.0	1.1	1	0	0	1	1	1	1	RecB-family	nuclease	(DUF2122)
Elf1	PF05129.8	gi|479326123|ref|YP_007866178.1|	-	1.8e-22	78.8	0.2	2.3e-22	78.4	0.1	1.2	1	0	0	1	1	1	1	Transcription	elongation	factor	Elf1	like
Lar_restr_allev	PF14354.1	gi|479326123|ref|YP_007866178.1|	-	0.0022	18.2	0.2	0.0038	17.4	0.1	1.4	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
Zn-ribbon_8	PF09723.5	gi|479326123|ref|YP_007866178.1|	-	0.0029	17.5	0.3	0.0048	16.8	0.2	1.4	1	0	0	1	1	1	1	Zinc	ribbon	domain
zf-ribbon_3	PF13248.1	gi|479326123|ref|YP_007866178.1|	-	0.0083	15.3	0.5	0.54	9.5	0.0	2.2	2	0	0	2	2	2	1	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|479326123|ref|YP_007866178.1|	-	0.011	15.4	0.5	0.017	14.7	0.3	1.3	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
TF_Zn_Ribbon	PF08271.7	gi|479326123|ref|YP_007866178.1|	-	0.033	13.5	2.6	0.033	13.5	1.8	1.9	2	1	0	2	2	2	0	TFIIB	zinc-binding
Rubredoxin	PF00301.15	gi|479326123|ref|YP_007866178.1|	-	0.041	13.7	0.4	0.27	11.1	0.1	2.2	2	0	0	2	2	2	0	Rubredoxin
CpXC	PF14353.1	gi|479326123|ref|YP_007866178.1|	-	0.044	13.7	1.8	1.1	9.2	0.0	2.1	1	1	1	2	2	2	0	CpXC	protein
DUF2387	PF09526.5	gi|479326123|ref|YP_007866178.1|	-	0.044	13.7	1.7	0.11	12.4	1.2	1.8	1	1	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
zinc_ribbon_5	PF13719.1	gi|479326123|ref|YP_007866178.1|	-	0.046	13.3	3.8	0.22	11.1	2.5	2.1	1	1	0	1	1	1	0	zinc-ribbon	domain
zf-FPG_IleRS	PF06827.9	gi|479326123|ref|YP_007866178.1|	-	0.05	13.2	0.6	0.22	11.1	0.1	2.1	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
zinc_ribbon_4	PF13717.1	gi|479326123|ref|YP_007866178.1|	-	0.052	13.2	3.9	0.23	11.1	2.6	2.0	1	1	0	1	1	1	0	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.2	gi|479326123|ref|YP_007866178.1|	-	0.056	13.2	1.1	0.12	12.1	0.7	1.6	1	1	0	1	1	1	0	Transposase	zinc-ribbon	domain
Nop10p	PF04135.7	gi|479326123|ref|YP_007866178.1|	-	0.064	12.9	0.4	4.8	6.9	0.3	3.0	1	1	0	1	1	1	0	Nucleolar	RNA-binding	protein,	Nop10p	family
zf-CSL	PF05207.8	gi|479326123|ref|YP_007866178.1|	-	0.067	12.7	0.8	0.18	11.3	0.6	1.7	1	0	0	1	1	1	0	CSL	zinc	finger
zf-ISL3	PF14690.1	gi|479326123|ref|YP_007866178.1|	-	0.089	12.8	0.2	0.76	9.8	0.1	2.3	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Ribosomal_L32p	PF01783.18	gi|479326123|ref|YP_007866178.1|	-	0.14	12.4	2.2	1.9	8.7	1.5	2.1	1	1	0	1	1	1	0	Ribosomal	L32p	protein	family
zf-Mss51	PF13824.1	gi|479326123|ref|YP_007866178.1|	-	1.2	9.0	3.1	1.8	8.4	0.2	2.1	1	1	1	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
zf-C2H2_6	PF13912.1	gi|479326123|ref|YP_007866178.1|	-	1.5	8.8	3.4	2.4	8.1	0.1	2.1	2	0	0	2	2	2	0	C2H2-type	zinc	finger
zinc_ribbon_2	PF13240.1	gi|479326123|ref|YP_007866178.1|	-	7	6.2	6.6	95	2.6	4.4	2.5	1	1	0	1	1	1	0	zinc-ribbon	domain
PcrB	PF01884.12	gi|479326124|ref|YP_007866179.1|	-	4.1e-59	199.6	1.5	4.6e-59	199.4	1.1	1.0	1	0	0	1	1	1	1	PcrB	family
His_biosynth	PF00977.16	gi|479326124|ref|YP_007866179.1|	-	1.5e-06	27.6	0.1	2.2e-06	27.0	0.1	1.3	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
DeoC	PF01791.4	gi|479326124|ref|YP_007866179.1|	-	0.00081	18.7	0.1	0.0012	18.2	0.0	1.2	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
DHO_dh	PF01180.16	gi|479326124|ref|YP_007866179.1|	-	0.0011	18.0	0.5	0.0015	17.5	0.3	1.2	1	0	0	1	1	1	1	Dihydroorotate	dehydrogenase
ThiG	PF05690.9	gi|479326124|ref|YP_007866179.1|	-	0.014	14.4	0.4	0.045	12.8	0.3	1.8	2	1	0	2	2	2	0	Thiazole	biosynthesis	protein	ThiG
Trp_syntA	PF00290.15	gi|479326124|ref|YP_007866179.1|	-	0.026	13.0	0.3	0.042	12.3	0.2	1.3	1	0	0	1	1	1	0	Tryptophan	synthase	alpha	chain
NanE	PF04131.9	gi|479326124|ref|YP_007866179.1|	-	0.04	12.8	0.0	0.24	10.3	0.0	2.0	2	0	0	2	2	2	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
TMP-TENI	PF02581.12	gi|479326124|ref|YP_007866179.1|	-	0.041	12.9	0.0	0.07	12.2	0.0	1.3	1	0	0	1	1	1	0	Thiamine	monophosphate	synthase/TENI
G3P_antiterm	PF04309.7	gi|479326124|ref|YP_007866179.1|	-	0.047	12.7	0.1	0.083	11.9	0.1	1.4	1	0	0	1	1	1	0	Glycerol-3-phosphate	responsive	antiterminator
FMN_dh	PF01070.13	gi|479326124|ref|YP_007866179.1|	-	0.052	12.3	0.0	0.071	11.9	0.0	1.1	1	0	0	1	1	1	0	FMN-dependent	dehydrogenase
Sec61_beta	PF03911.11	gi|479326125|ref|YP_007866180.1|	-	6.5e-17	61.0	0.4	7.3e-17	60.8	0.3	1.1	1	0	0	1	1	1	1	Sec61beta	family
AsnC_trans_reg	PF01037.16	gi|479326127|ref|YP_007866182.1|	-	8.4e-16	57.4	0.2	9.2e-16	57.3	0.2	1.0	1	0	0	1	1	1	1	AsnC	family
ICE2	PF08426.5	gi|479326127|ref|YP_007866182.1|	-	0.024	13.2	0.1	0.024	13.2	0.1	1.0	1	0	0	1	1	1	0	ICE2
GYD	PF08734.6	gi|479326127|ref|YP_007866182.1|	-	0.095	12.4	0.0	0.1	12.3	0.0	1.1	1	0	0	1	1	1	0	GYD	domain
DUF1743	PF08489.6	gi|479326128|ref|YP_007866183.1|	-	4.2e-39	132.9	0.0	9.7e-39	131.7	0.0	1.7	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1743)
OrfB_Zn_ribbon	PF07282.6	gi|479326128|ref|YP_007866183.1|	-	0.011	15.4	1.1	0.021	14.4	0.7	1.5	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
Zn_Tnp_IS1595	PF12760.2	gi|479326128|ref|YP_007866183.1|	-	0.03	14.1	1.2	0.055	13.2	0.9	1.4	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
DUF3477	PF11963.3	gi|479326128|ref|YP_007866183.1|	-	0.054	12.4	0.0	0.08	11.9	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3477)
zf-FPG_IleRS	PF06827.9	gi|479326128|ref|YP_007866183.1|	-	2.7	7.7	4.6	9.8	5.9	3.2	1.9	1	1	1	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
Cdc6_C	PF09079.6	gi|479326129|ref|YP_007866184.1|	-	1.4e-25	88.7	1.3	1.3e-24	85.7	0.1	2.8	2	1	1	3	3	3	1	CDC6,	C	terminal
AAA_22	PF13401.1	gi|479326129|ref|YP_007866184.1|	-	7.2e-13	48.8	0.0	1.7e-12	47.6	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|479326129|ref|YP_007866184.1|	-	1.6e-11	44.5	0.1	6.6e-10	39.2	0.0	2.5	2	1	0	2	2	2	1	AAA	ATPase	domain
AAA	PF00004.24	gi|479326129|ref|YP_007866184.1|	-	6e-10	39.4	0.0	1.3e-09	38.3	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Arch_ATPase	PF01637.13	gi|479326129|ref|YP_007866184.1|	-	1.6e-06	28.0	5.4	5.1e-06	26.3	2.3	2.5	2	1	0	2	2	2	1	Archaeal	ATPase
DUF815	PF05673.8	gi|479326129|ref|YP_007866184.1|	-	7.5e-06	25.0	0.0	4.1e-05	22.6	0.0	2.1	2	1	1	3	3	3	1	Protein	of	unknown	function	(DUF815)
NB-ARC	PF00931.17	gi|479326129|ref|YP_007866184.1|	-	2.7e-05	23.1	0.0	4e-05	22.6	0.0	1.2	1	0	0	1	1	1	1	NB-ARC	domain
AAA_17	PF13207.1	gi|479326129|ref|YP_007866184.1|	-	0.0045	17.8	3.0	0.025	15.3	2.2	2.4	1	1	0	1	1	1	1	AAA	domain
ResIII	PF04851.10	gi|479326129|ref|YP_007866184.1|	-	0.0048	16.7	0.0	0.011	15.6	0.0	1.6	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
RNA_helicase	PF00910.17	gi|479326129|ref|YP_007866184.1|	-	0.0085	16.2	0.2	0.91	9.7	0.0	2.3	2	0	0	2	2	2	1	RNA	helicase
PIF1	PF05970.9	gi|479326129|ref|YP_007866184.1|	-	0.009	14.9	0.1	0.035	13.0	0.0	1.8	2	0	0	2	2	2	1	PIF1-like	helicase
AAA_32	PF13654.1	gi|479326129|ref|YP_007866184.1|	-	0.012	14.3	0.0	0.025	13.2	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_14	PF13173.1	gi|479326129|ref|YP_007866184.1|	-	0.012	15.4	0.2	0.025	14.4	0.1	1.6	1	0	0	1	1	1	0	AAA	domain
KAP_NTPase	PF07693.9	gi|479326129|ref|YP_007866184.1|	-	0.015	14.3	2.3	2.1	7.2	0.0	2.6	2	1	1	3	3	3	0	KAP	family	P-loop	domain
Bac_DnaA	PF00308.13	gi|479326129|ref|YP_007866184.1|	-	0.016	14.9	0.1	0.41	10.2	0.0	2.2	2	0	0	2	2	2	0	Bacterial	dnaA	protein
DEAD	PF00270.24	gi|479326129|ref|YP_007866184.1|	-	0.024	14.1	0.4	5.6	6.4	0.1	2.4	1	1	1	2	2	2	0	DEAD/DEAH	box	helicase
NACHT	PF05729.7	gi|479326129|ref|YP_007866184.1|	-	0.026	14.1	0.0	0.059	13.0	0.0	1.6	1	0	0	1	1	1	0	NACHT	domain
DUF2075	PF09848.4	gi|479326129|ref|YP_007866184.1|	-	0.03	13.2	0.0	0.04	12.8	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
SMC_N	PF02463.14	gi|479326129|ref|YP_007866184.1|	-	0.034	13.3	0.2	3.1	6.9	0.0	2.2	2	0	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
Pox_A32	PF04665.7	gi|479326129|ref|YP_007866184.1|	-	0.042	13.1	2.5	0.08	12.2	1.8	1.5	1	1	0	1	1	1	0	Poxvirus	A32	protein
AAA_5	PF07728.9	gi|479326129|ref|YP_007866184.1|	-	0.058	13.1	0.1	0.18	11.5	0.0	1.9	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
T2SE	PF00437.15	gi|479326129|ref|YP_007866184.1|	-	0.063	12.1	0.0	0.12	11.3	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
RFX_DNA_binding	PF02257.10	gi|479326129|ref|YP_007866184.1|	-	0.072	13.2	0.0	0.18	11.9	0.0	1.6	1	0	0	1	1	1	0	RFX	DNA-binding	domain
AAA_18	PF13238.1	gi|479326129|ref|YP_007866184.1|	-	0.12	12.7	0.7	0.57	10.4	0.1	2.4	2	1	0	2	2	2	0	AAA	domain
TrwB_AAD_bind	PF10412.4	gi|479326129|ref|YP_007866184.1|	-	0.15	10.6	0.1	0.81	8.2	0.0	1.9	2	0	0	2	2	2	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
SRP54_N	PF02881.14	gi|479326129|ref|YP_007866184.1|	-	0.23	11.5	2.1	1.2	9.2	0.0	2.9	3	0	0	3	3	2	0	SRP54-type	protein,	helical	bundle	domain
DUF99	PF01949.11	gi|479326130|ref|YP_007866185.1|	-	8.1e-28	96.7	0.0	1.1e-27	96.3	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF99
CTP_transf_2	PF01467.21	gi|479326131|ref|YP_007866186.1|	-	4e-19	69.2	0.0	5.3e-19	68.8	0.0	1.2	1	0	0	1	1	1	1	Cytidylyltransferase
SAM_adeno_trans	PF01887.11	gi|479326132|ref|YP_007866187.1|	-	5e-86	287.9	0.1	5.6e-86	287.7	0.0	1.0	1	0	0	1	1	1	1	S-adenosyl-l-methionine	hydroxide	adenosyltransferase
Ribosomal_L21e	PF01157.13	gi|479326132|ref|YP_007866187.1|	-	0.026	14.2	0.0	0.069	12.9	0.0	1.6	1	0	0	1	1	1	0	Ribosomal	protein	L21e
DUF3189	PF11385.3	gi|479326132|ref|YP_007866187.1|	-	0.079	12.5	0.1	3	7.4	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3189)
CYTH	PF01928.16	gi|479326133|ref|YP_007866188.1|	-	3.9e-30	104.8	2.6	4.6e-30	104.6	1.8	1.1	1	0	0	1	1	1	1	CYTH	domain
Glyoxalase_4	PF13669.1	gi|479326133|ref|YP_007866188.1|	-	0.025	14.6	0.0	0.053	13.5	0.0	1.5	1	0	0	1	1	1	0	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Nol1_Nop2_Fmu	PF01189.12	gi|479326134|ref|YP_007866189.1|	-	4.1e-53	180.5	0.0	5.5e-53	180.1	0.0	1.1	1	0	0	1	1	1	1	NOL1/NOP2/sun	family
Methyltransf_26	PF13659.1	gi|479326134|ref|YP_007866189.1|	-	4.4e-07	29.9	0.0	6.7e-07	29.3	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|479326134|ref|YP_007866189.1|	-	1e-06	28.3	0.0	2.2e-06	27.3	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
FtsJ	PF01728.14	gi|479326134|ref|YP_007866189.1|	-	5.5e-05	23.2	0.0	8.6e-05	22.6	0.0	1.4	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
PCMT	PF01135.14	gi|479326134|ref|YP_007866189.1|	-	0.00031	20.3	0.0	0.00049	19.6	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_18	PF12847.2	gi|479326134|ref|YP_007866189.1|	-	0.0011	19.5	0.0	0.0018	18.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|479326134|ref|YP_007866189.1|	-	0.0011	18.0	0.0	0.0019	17.2	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_15	PF09445.5	gi|479326134|ref|YP_007866189.1|	-	0.0057	16.2	0.0	0.01	15.3	0.0	1.4	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Cons_hypoth95	PF03602.10	gi|479326134|ref|YP_007866189.1|	-	0.0079	15.6	0.0	0.014	14.8	0.0	1.3	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltransf_4	PF02390.12	gi|479326134|ref|YP_007866189.1|	-	0.013	14.6	0.0	0.039	13.0	0.0	1.8	2	0	0	2	2	2	0	Putative	methyltransferase
Fibrillarin	PF01269.12	gi|479326134|ref|YP_007866189.1|	-	0.021	13.7	0.0	0.037	12.9	0.0	1.3	1	0	0	1	1	1	0	Fibrillarin
UPF0113	PF03657.8	gi|479326135|ref|YP_007866190.1|	-	0.026	14.1	0.8	0.053	13.1	0.6	1.8	1	1	0	1	1	1	0	Uncharacterised	protein	family	(UPF0113)
Rad51	PF08423.6	gi|479326136|ref|YP_007866191.1|	-	3e-92	308.1	0.0	3.7e-92	307.8	0.0	1.1	1	0	0	1	1	1	1	Rad51
RecA	PF00154.16	gi|479326136|ref|YP_007866191.1|	-	1.8e-16	60.1	0.1	2.3e-16	59.7	0.1	1.1	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
AAA_25	PF13481.1	gi|479326136|ref|YP_007866191.1|	-	3.4e-13	49.4	0.0	5.7e-13	48.7	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
KaiC	PF06745.8	gi|479326136|ref|YP_007866191.1|	-	1.9e-11	43.5	0.0	3e-11	42.8	0.0	1.3	1	0	0	1	1	1	1	KaiC
HHH_5	PF14520.1	gi|479326136|ref|YP_007866191.1|	-	2.1e-08	34.2	0.1	5.6e-08	32.8	0.0	1.7	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
AAA_24	PF13479.1	gi|479326136|ref|YP_007866191.1|	-	0.0034	16.9	0.1	0.011	15.3	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|479326136|ref|YP_007866191.1|	-	0.0076	16.5	0.0	0.016	15.5	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|479326136|ref|YP_007866191.1|	-	0.0081	16.3	0.0	0.018	15.1	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
Cdd1	PF11731.3	gi|479326136|ref|YP_007866191.1|	-	0.018	14.9	0.0	0.048	13.5	0.0	1.7	1	0	0	1	1	1	0	Pathogenicity	locus
Sec63	PF02889.11	gi|479326136|ref|YP_007866191.1|	-	0.072	12.3	0.0	0.13	11.4	0.0	1.3	1	0	0	1	1	1	0	Sec63	Brl	domain
HIT	PF01230.18	gi|479326137|ref|YP_007866192.1|	-	6.4e-13	49.0	0.0	1.2e-12	48.2	0.0	1.5	1	0	0	1	1	1	1	HIT	domain
DcpS_C	PF11969.3	gi|479326137|ref|YP_007866192.1|	-	1.8e-08	34.6	0.0	2.6e-08	34.0	0.0	1.2	1	0	0	1	1	1	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
CwfJ_C_1	PF04677.10	gi|479326137|ref|YP_007866192.1|	-	2.7e-07	30.2	0.2	4.2e-07	29.6	0.1	1.4	1	1	0	1	1	1	1	Protein	similar	to	CwfJ	C-terminus	1
tRNA-Thr_ED	PF08915.6	gi|479326137|ref|YP_007866192.1|	-	0.053	13.4	0.0	0.08	12.9	0.0	1.2	1	0	0	1	1	1	0	Archaea-specific	editing	domain	of	threonyl-tRNA	synthetase
PALP	PF00291.20	gi|479326138|ref|YP_007866193.1|	-	4.5e-77	259.2	0.1	5.5e-77	259.0	0.1	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
ACT_4	PF13291.1	gi|479326138|ref|YP_007866193.1|	-	0.0087	16.3	0.3	0.034	14.4	0.0	2.1	2	0	0	2	2	2	1	ACT	domain
ACT	PF01842.20	gi|479326138|ref|YP_007866193.1|	-	0.011	15.1	1.4	0.027	13.9	0.0	2.3	2	0	0	2	2	2	0	ACT	domain
PDT	PF00800.13	gi|479326139|ref|YP_007866194.1|	-	5.4e-49	166.2	0.1	6.9e-49	165.8	0.1	1.1	1	0	0	1	1	1	1	Prephenate	dehydratase
ACT	PF01842.20	gi|479326139|ref|YP_007866194.1|	-	2.5e-08	33.2	0.0	7e-08	31.8	0.0	1.8	1	0	0	1	1	1	1	ACT	domain
HTH_AsnC-type	PF13404.1	gi|479326140|ref|YP_007866195.1|	-	1.4e-05	24.5	0.0	0.0056	16.1	0.0	2.5	2	0	0	2	2	2	2	AsnC-type	helix-turn-helix	domain
DUF4342	PF14242.1	gi|479326140|ref|YP_007866195.1|	-	0.0011	18.6	4.2	0.015	15.0	0.1	3.1	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF4342)
DUF2805	PF10985.3	gi|479326140|ref|YP_007866195.1|	-	0.0022	17.8	0.6	0.49	10.3	0.1	2.4	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2805)
ENT	PF03735.9	gi|479326140|ref|YP_007866195.1|	-	0.0035	17.0	0.4	3.3	7.4	0.0	2.7	2	0	0	2	2	2	2	ENT	domain
HTH_24	PF13412.1	gi|479326140|ref|YP_007866195.1|	-	0.0078	15.5	1.1	0.0078	15.5	0.8	3.1	4	2	0	4	4	4	1	Winged	helix-turn-helix	DNA-binding
HTH_20	PF12840.2	gi|479326140|ref|YP_007866195.1|	-	0.035	13.9	0.1	0.19	11.5	0.0	2.1	2	0	0	2	2	2	0	Helix-turn-helix	domain
TrmB	PF01978.14	gi|479326140|ref|YP_007866195.1|	-	0.04	13.6	0.8	2.4	7.9	0.0	3.2	3	0	0	3	3	3	0	Sugar-specific	transcriptional	regulator	TrmB
DUF1044	PF06296.7	gi|479326140|ref|YP_007866195.1|	-	0.064	13.0	0.0	0.64	9.8	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1044)
DUF3288	PF11691.3	gi|479326140|ref|YP_007866195.1|	-	0.065	12.9	0.1	5.5	6.8	0.0	2.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3288)
HTH_19	PF12844.2	gi|479326140|ref|YP_007866195.1|	-	0.088	12.8	5.1	1.9	8.6	0.2	3.8	4	1	0	4	4	4	0	Helix-turn-helix	domain
DAO	PF01266.19	gi|479326141|ref|YP_007866196.1|	-	5.4e-14	51.8	0.0	2.5e-06	26.6	0.0	2.3	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.9	gi|479326141|ref|YP_007866196.1|	-	9.5e-11	41.9	1.2	6.2e-06	26.2	0.0	3.2	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|479326141|ref|YP_007866196.1|	-	1e-09	37.7	0.1	3.8e-05	22.7	0.0	2.4	2	0	0	2	2	2	2	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.9	gi|479326141|ref|YP_007866196.1|	-	4.4e-08	32.0	0.0	0.00024	19.6	0.0	2.2	2	0	0	2	2	2	2	HI0933-like	protein
FAD_binding_2	PF00890.19	gi|479326141|ref|YP_007866196.1|	-	6.9e-06	25.1	1.3	0.00081	18.3	0.1	2.8	3	0	0	3	3	3	1	FAD	binding	domain
NAD_binding_8	PF13450.1	gi|479326141|ref|YP_007866196.1|	-	6.9e-06	25.9	0.1	0.00012	22.0	0.0	2.4	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_3	PF13738.1	gi|479326141|ref|YP_007866196.1|	-	2.4e-05	24.5	0.0	0.0078	16.2	0.0	2.3	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_9	PF13454.1	gi|479326141|ref|YP_007866196.1|	-	0.00018	21.2	0.0	0.0026	17.5	0.0	2.2	2	0	0	2	2	2	1	FAD-NAD(P)-binding
Lycopene_cycl	PF05834.7	gi|479326141|ref|YP_007866196.1|	-	0.00021	20.3	0.0	0.0073	15.2	0.0	2.1	2	0	0	2	2	2	1	Lycopene	cyclase	protein
FAD_binding_3	PF01494.14	gi|479326141|ref|YP_007866196.1|	-	0.0016	17.6	0.0	0.0027	16.8	0.0	1.4	1	0	0	1	1	1	1	FAD	binding	domain
Thi4	PF01946.12	gi|479326141|ref|YP_007866196.1|	-	0.0022	17.1	0.3	0.0062	15.6	0.0	1.9	2	0	0	2	2	2	1	Thi4	family
Pyr_redox	PF00070.22	gi|479326141|ref|YP_007866196.1|	-	0.0035	17.6	1.4	0.53	10.7	0.0	2.8	2	1	1	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Trp_halogenase	PF04820.9	gi|479326141|ref|YP_007866196.1|	-	0.024	13.2	0.0	0.058	12.0	0.0	1.6	2	0	0	2	2	2	0	Tryptophan	halogenase
FAD_oxidored	PF12831.2	gi|479326141|ref|YP_007866196.1|	-	0.065	12.3	0.1	0.1	11.6	0.0	1.3	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
Adenylsucc_synt	PF00709.16	gi|479326142|ref|YP_007866197.1|	-	1.5e-73	247.8	0.1	5.1e-40	137.4	0.0	3.0	1	1	2	3	3	3	3	Adenylosuccinate	synthetase
DUF1297	PF06973.7	gi|479326143|ref|YP_007866198.1|	-	1.2e-78	262.7	0.0	1.6e-78	262.3	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1297)
DUF1246	PF06849.7	gi|479326143|ref|YP_007866198.1|	-	2.3e-46	156.5	0.0	3.5e-46	155.9	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1246)
ATP-grasp_4	PF13535.1	gi|479326143|ref|YP_007866198.1|	-	1.4e-05	24.8	0.0	0.00048	19.9	0.0	2.1	1	1	0	1	1	1	1	ATP-grasp	domain
DUF1297	PF06973.7	gi|479326144|ref|YP_007866199.1|	-	7.2e-76	253.6	0.3	9.9e-76	253.2	0.2	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1297)
DUF1246	PF06849.7	gi|479326144|ref|YP_007866199.1|	-	3.9e-42	142.9	0.2	6.9e-42	142.1	0.1	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1246)
ATP-grasp_4	PF13535.1	gi|479326144|ref|YP_007866199.1|	-	0.0029	17.3	0.0	0.023	14.4	0.0	2.0	1	1	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_3	PF02655.9	gi|479326144|ref|YP_007866199.1|	-	0.0034	17.2	0.4	0.0092	15.8	0.3	1.8	1	1	0	1	1	1	1	ATP-grasp	domain
GARS_A	PF01071.14	gi|479326144|ref|YP_007866199.1|	-	0.008	15.7	0.3	0.023	14.2	0.1	1.8	2	0	0	2	2	2	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATP-grasp	PF02222.17	gi|479326144|ref|YP_007866199.1|	-	0.034	13.4	0.4	0.99	8.7	0.1	2.1	2	0	0	2	2	2	0	ATP-grasp	domain
GSH-S_ATP	PF02955.11	gi|479326144|ref|YP_007866199.1|	-	0.057	12.5	0.2	0.098	11.7	0.1	1.4	1	0	0	1	1	1	0	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
CPSase_L_D2	PF02786.12	gi|479326144|ref|YP_007866199.1|	-	0.066	12.4	0.0	0.11	11.7	0.0	1.3	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Lyase_1	PF00206.15	gi|479326145|ref|YP_007866200.1|	-	4.6e-43	147.5	0.0	7.1e-43	146.9	0.0	1.2	1	0	0	1	1	1	1	Lyase
ADSL_C	PF10397.4	gi|479326145|ref|YP_007866200.1|	-	2.6e-22	78.6	0.1	7.8e-22	77.0	0.0	1.9	2	0	0	2	2	2	1	Adenylosuccinate	lyase	C-terminus
FumaraseC_C	PF10415.4	gi|479326145|ref|YP_007866200.1|	-	0.0086	16.1	0.4	0.16	12.0	0.0	3.2	4	0	0	4	4	4	1	Fumarase	C	C-terminus
COX3	PF00510.13	gi|479326145|ref|YP_007866200.1|	-	0.17	11.3	0.0	0.26	10.6	0.0	1.2	1	0	0	1	1	1	0	Cytochrome	c	oxidase	subunit	III
AIRS	PF00586.19	gi|479326146|ref|YP_007866201.1|	-	5e-10	39.4	0.0	7.9e-10	38.8	0.0	1.3	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
Radical_SAM	PF04055.16	gi|479326147|ref|YP_007866202.1|	-	6.8e-20	71.8	0.0	6.8e-20	71.8	0.0	2.3	3	0	0	3	3	3	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|479326147|ref|YP_007866202.1|	-	3.4e-09	36.7	0.0	1.1e-08	35.1	0.0	1.9	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|479326147|ref|YP_007866202.1|	-	9e-08	32.3	0.0	2.1e-07	31.1	0.0	1.6	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Peptidase_S13	PF02113.10	gi|479326147|ref|YP_007866202.1|	-	0.13	10.7	0.0	0.28	9.6	0.0	1.4	1	0	0	1	1	1	0	D-Ala-D-Ala	carboxypeptidase	3	(S13)	family
PAN_4	PF14295.1	gi|479326148|ref|YP_007866203.1|	-	0.016	14.9	2.6	0.016	14.9	1.8	1.6	2	0	0	2	2	2	0	PAN	domain
Laminin_N	PF00055.12	gi|479326148|ref|YP_007866203.1|	-	0.81	8.6	4.1	0.82	8.6	2.9	1.1	1	0	0	1	1	1	0	Laminin	N-terminal	(Domain	VI)
Pribosyltran	PF00156.22	gi|479326150|ref|YP_007866205.1|	-	8.1e-23	80.5	0.3	1.2e-22	79.9	0.2	1.3	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
PRTase_2	PF15609.1	gi|479326150|ref|YP_007866205.1|	-	0.017	14.4	0.0	0.02	14.2	0.0	1.2	1	0	0	1	1	1	0	Phosphoribosyl	transferase
GatB_N	PF02934.10	gi|479326151|ref|YP_007866206.1|	-	5.4e-105	350.3	0.0	7.7e-105	349.8	0.0	1.2	1	0	0	1	1	1	1	GatB/GatE	catalytic	domain
GatB_Yqey	PF02637.13	gi|479326151|ref|YP_007866206.1|	-	1.9e-41	141.2	7.1	3.5e-41	140.3	4.9	1.5	1	0	0	1	1	1	1	GatB	domain
Ribosomal_L17	PF01196.14	gi|479326151|ref|YP_007866206.1|	-	1.6	9.3	5.4	12	6.5	0.1	3.7	2	1	1	3	3	3	0	Ribosomal	protein	L17
hEGF	PF12661.2	gi|479326151|ref|YP_007866206.1|	-	8.5	6.7	5.8	0.49	10.5	0.3	1.9	2	0	0	2	2	2	0	Human	growth	factor-like	EGF
UPRTase	PF14681.1	gi|479326152|ref|YP_007866207.1|	-	8e-54	181.9	0.0	9.1e-54	181.8	0.0	1.0	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
Pribosyltran	PF00156.22	gi|479326152|ref|YP_007866207.1|	-	1.6e-07	31.1	1.7	2.8e-07	30.2	1.1	1.5	1	1	0	1	1	1	1	Phosphoribosyl	transferase	domain
PRTase_2	PF15609.1	gi|479326152|ref|YP_007866207.1|	-	0.062	12.5	0.0	0.11	11.8	0.0	1.5	1	1	0	1	1	1	0	Phosphoribosyl	transferase
DUF2338	PF10100.4	gi|479326152|ref|YP_007866207.1|	-	0.086	11.1	0.1	0.16	10.3	0.1	1.4	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2338)
Ribosomal_S28e	PF01200.13	gi|479326153|ref|YP_007866208.1|	-	1.8e-30	104.4	6.6	2.3e-30	104.1	4.6	1.3	1	1	0	1	1	1	1	Ribosomal	protein	S28e
KOW	PF00467.24	gi|479326153|ref|YP_007866208.1|	-	0.021	14.5	0.7	0.75	9.6	0.1	2.9	2	1	0	2	2	2	0	KOW	motif
Ribosomal_L24e	PF01246.15	gi|479326154|ref|YP_007866209.1|	-	2.6e-21	75.2	1.4	2.8e-21	75.1	1.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L24e
zf-FCS	PF06467.9	gi|479326154|ref|YP_007866209.1|	-	1.2e-06	28.0	1.0	1.2e-06	28.0	0.7	1.4	2	0	0	2	2	2	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
zf-MYND	PF01753.13	gi|479326154|ref|YP_007866209.1|	-	0.0005	19.8	0.0	0.00088	19.0	0.0	1.4	1	1	0	1	1	1	1	MYND	finger
YHS	PF04945.8	gi|479326154|ref|YP_007866209.1|	-	0.002	17.9	0.3	0.0033	17.2	0.2	1.4	1	1	0	1	1	1	1	YHS	domain
DUF581	PF04570.9	gi|479326154|ref|YP_007866209.1|	-	0.0028	16.8	0.4	0.0051	16.0	0.3	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF581)
DUF2116	PF09889.4	gi|479326154|ref|YP_007866209.1|	-	0.031	14.0	2.4	1.7	8.5	0.2	2.1	2	0	0	2	2	2	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
Arc_trans_TRASH	PF08394.5	gi|479326154|ref|YP_007866209.1|	-	0.053	13.6	1.1	0.13	12.4	0.1	2.0	1	1	1	2	2	2	0	Archaeal	TRASH	domain
CpXC	PF14353.1	gi|479326154|ref|YP_007866209.1|	-	0.13	12.2	0.1	0.15	12.0	0.1	1.1	1	0	0	1	1	1	0	CpXC	protein
zf-C4_ClpX	PF06689.8	gi|479326154|ref|YP_007866209.1|	-	0.14	11.6	0.1	0.14	11.6	0.0	1.5	2	0	0	2	2	2	0	ClpX	C4-type	zinc	finger
DUF2175	PF09943.4	gi|479326154|ref|YP_007866209.1|	-	0.15	12.1	0.2	0.16	12.0	0.2	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2175)
zinc_ribbon_2	PF13240.1	gi|479326154|ref|YP_007866209.1|	-	0.24	10.9	0.3	0.24	10.9	0.2	2.0	2	1	0	1	1	1	0	zinc-ribbon	domain
DUF329	PF03884.9	gi|479326154|ref|YP_007866209.1|	-	3.1	7.4	5.0	18	4.9	3.5	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF329)
NDK	PF00334.14	gi|479326155|ref|YP_007866210.1|	-	3.3e-58	195.2	0.0	3.6e-58	195.1	0.0	1.0	1	0	0	1	1	1	1	Nucleoside	diphosphate	kinase
GTP_EFTU	PF00009.22	gi|479326156|ref|YP_007866211.1|	-	9.2e-31	106.7	0.0	3.6e-30	104.8	0.0	1.9	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D4	PF14578.1	gi|479326156|ref|YP_007866211.1|	-	4.1e-24	84.0	2.2	4.1e-24	84.0	1.5	2.5	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	4
IF-2	PF11987.3	gi|479326156|ref|YP_007866211.1|	-	1.4e-17	63.5	4.9	3.7e-17	62.1	1.8	2.4	2	0	0	2	2	2	1	Translation-initiation	factor	2
GTP_EFTU_D2	PF03144.20	gi|479326156|ref|YP_007866211.1|	-	3.3e-11	43.1	3.9	8.3e-11	41.8	0.0	2.8	3	0	0	3	3	3	1	Elongation	factor	Tu	domain	2
Miro	PF08477.8	gi|479326156|ref|YP_007866211.1|	-	8.9e-07	29.4	0.1	3e-06	27.7	0.0	2.0	2	0	0	2	2	1	1	Miro-like	protein
MMR_HSR1	PF01926.18	gi|479326156|ref|YP_007866211.1|	-	1.2e-06	28.4	0.3	5.1e-06	26.4	0.0	2.2	2	1	0	2	2	2	1	50S	ribosome-binding	GTPase
Ras	PF00071.17	gi|479326156|ref|YP_007866211.1|	-	0.0023	17.3	0.0	0.011	15.1	0.0	2.2	1	1	0	1	1	1	1	Ras	family
Arf	PF00025.16	gi|479326156|ref|YP_007866211.1|	-	0.0038	16.4	0.3	3.4	6.8	0.0	3.1	2	1	0	2	2	2	2	ADP-ribosylation	factor	family
Dynamin_N	PF00350.18	gi|479326156|ref|YP_007866211.1|	-	0.017	14.9	2.0	0.079	12.7	0.0	2.7	4	0	0	4	4	3	0	Dynamin	family
DUF367	PF04034.8	gi|479326156|ref|YP_007866211.1|	-	0.029	13.9	0.0	0.1	12.2	0.0	1.9	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF367)
PduV-EutP	PF10662.4	gi|479326156|ref|YP_007866211.1|	-	0.05	13.1	0.0	0.95	8.9	0.0	2.9	3	0	0	3	3	3	0	Ethanolamine	utilisation	-	propanediol	utilisation
Peripla_BP_4	PF13407.1	gi|479326156|ref|YP_007866211.1|	-	0.076	12.3	0.1	0.2	10.9	0.0	1.6	2	0	0	2	2	2	0	Periplasmic	binding	protein	domain
SRPRB	PF09439.5	gi|479326156|ref|YP_007866211.1|	-	0.25	10.5	3.7	1.3	8.1	0.2	3.2	2	1	0	2	2	2	0	Signal	recognition	particle	receptor	beta	subunit
DUF1158	PF06643.6	gi|479326157|ref|YP_007866212.1|	-	1.3	9.3	4.1	1.5	9.2	2.9	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1158)
RNA_pol_Rpb5_C	PF01191.14	gi|479326158|ref|YP_007866213.1|	-	1.4e-28	98.2	0.3	1.5e-28	98.1	0.2	1.0	1	0	0	1	1	1	1	RNA	polymerase	Rpb5,	C-terminal	domain
RNA_pol_Rpb2_6	PF00562.23	gi|479326159|ref|YP_007866214.1|	-	8.1e-125	416.5	0.0	1.3e-124	415.8	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	6
RNA_pol_Rpb2_1	PF04563.10	gi|479326159|ref|YP_007866214.1|	-	2.3e-60	203.0	0.0	4.2e-60	202.1	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	beta	subunit
RNA_pol_Rpb2_2	PF04561.9	gi|479326159|ref|YP_007866214.1|	-	2.4e-41	141.2	0.0	4e-41	140.5	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	2
RNA_pol_Rpb2_7	PF04560.15	gi|479326159|ref|YP_007866214.1|	-	4.7e-28	97.2	0.0	9.7e-28	96.2	0.0	1.6	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	7
RNA_pol_Rpb2_3	PF04565.11	gi|479326159|ref|YP_007866214.1|	-	3.9e-26	90.5	0.0	9.7e-26	89.3	0.0	1.7	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	3
RNA_pol_Rpb2_4	PF04566.8	gi|479326159|ref|YP_007866214.1|	-	3e-17	62.1	2.8	6.7e-17	61.0	1.9	1.6	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	4
RNA_pol_Rpb2_5	PF04567.12	gi|479326159|ref|YP_007866214.1|	-	4e-15	55.5	0.3	9.3e-15	54.3	0.2	1.7	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	5
RNA_pol_Rpb1_1	PF04997.7	gi|479326160|ref|YP_007866215.1|	-	3e-91	306.1	0.1	6.6e-90	301.7	0.1	2.1	1	1	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	1
RNA_pol_Rpb1_2	PF00623.15	gi|479326160|ref|YP_007866215.1|	-	2.2e-69	232.6	0.0	5.3e-69	231.4	0.0	1.7	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	2
RNA_pol_Rpb1_3	PF04983.13	gi|479326160|ref|YP_007866215.1|	-	2.2e-38	131.4	0.0	3.6e-38	130.7	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	3
RNA_pol_Rpb1_4	PF05000.12	gi|479326160|ref|YP_007866215.1|	-	2.7e-33	113.9	0.0	5.7e-33	112.8	0.0	1.6	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	4
RNA_pol_Rpb1_5	PF04998.12	gi|479326160|ref|YP_007866215.1|	-	1.1e-26	93.6	0.1	2.3e-26	92.6	0.1	1.5	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	5
zf-ribbon_3	PF13248.1	gi|479326160|ref|YP_007866215.1|	-	6.2e-05	22.0	0.0	0.0092	15.1	0.0	2.8	2	1	0	2	2	2	1	zinc-ribbon	domain
DZR	PF12773.2	gi|479326160|ref|YP_007866215.1|	-	0.051	13.4	2.3	6.2	6.7	0.0	2.6	2	1	0	2	2	2	0	Double	zinc	ribbon
zf-FPG_IleRS	PF06827.9	gi|479326160|ref|YP_007866215.1|	-	0.069	12.8	8.6	0.53	9.9	0.2	3.4	3	0	0	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
HypA	PF01155.14	gi|479326160|ref|YP_007866215.1|	-	0.25	11.0	0.8	1.6	8.4	0.1	2.5	3	0	0	3	3	3	0	Hydrogenase	expression/synthesis	hypA	family
Zn-ribbon_8	PF09723.5	gi|479326160|ref|YP_007866215.1|	-	1.2	9.1	4.2	17	5.4	0.1	3.2	3	0	0	3	3	3	0	Zinc	ribbon	domain
Zn_Tnp_IS1595	PF12760.2	gi|479326160|ref|YP_007866215.1|	-	1.5	8.6	7.6	1.6	8.5	0.0	3.1	3	0	0	3	3	3	0	Transposase	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|479326160|ref|YP_007866215.1|	-	2.5	7.6	9.6	4.9	6.7	0.5	3.3	3	0	0	3	3	3	0	zinc-ribbon	domain
zf-ISL3	PF14690.1	gi|479326160|ref|YP_007866215.1|	-	2.7	8.1	8.9	1.7	8.7	0.2	3.5	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
DUF35_N	PF12172.3	gi|479326160|ref|YP_007866215.1|	-	2.8	7.9	6.1	13	5.8	0.0	3.4	3	0	0	3	3	3	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
GFA	PF04828.9	gi|479326160|ref|YP_007866215.1|	-	5.9	6.9	5.0	1.4	8.9	0.5	2.2	2	1	0	2	2	2	0	Glutathione-dependent	formaldehyde-activating	enzyme
RNA_pol_Rpb1_5	PF04998.12	gi|479326161|ref|YP_007866216.1|	-	7.1e-55	186.2	2.8	9.7e-55	185.7	2.0	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	5
RNA_pol_Rpb1_7	PF04990.7	gi|479326161|ref|YP_007866216.1|	-	0.042	13.5	1.3	0.16	11.6	0.2	2.2	1	1	1	2	2	2	0	RNA	polymerase	Rpb1,	domain	7
Ribosomal_L7Ae	PF01248.21	gi|479326162|ref|YP_007866217.1|	-	7.2e-17	60.6	0.0	8e-17	60.5	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
KH_2	PF07650.12	gi|479326163|ref|YP_007866218.1|	-	6.9e-11	41.5	5.9	7.1e-06	25.4	1.2	2.1	1	1	1	2	2	2	2	KH	domain
KH_5	PF13184.1	gi|479326163|ref|YP_007866218.1|	-	1e-10	41.2	3.2	1.2e-10	41.0	0.3	2.1	2	1	0	2	2	2	1	NusA-like	KH	domain
KH_4	PF13083.1	gi|479326163|ref|YP_007866218.1|	-	4.7e-08	32.5	1.8	6.3e-07	28.9	0.0	2.2	2	0	0	2	2	2	1	KH	domain
KH_1	PF00013.24	gi|479326163|ref|YP_007866218.1|	-	4.1e-05	23.1	1.1	0.12	12.0	0.1	2.2	2	0	0	2	2	2	2	KH	domain
RNA_pol_Rpc34	PF05158.7	gi|479326163|ref|YP_007866218.1|	-	0.076	12.1	0.4	0.095	11.8	0.3	1.1	1	0	0	1	1	1	0	RNA	polymerase	Rpc34	subunit
KH_3	PF13014.1	gi|479326163|ref|YP_007866218.1|	-	3.7	7.2	7.2	8.6	6.1	0.5	3.2	2	2	1	3	3	3	0	KH	domain
Ribosom_S12_S23	PF00164.20	gi|479326164|ref|YP_007866219.1|	-	9.5e-41	138.0	0.5	1.1e-40	137.7	0.4	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S12/S23
DNase-RNase	PF02577.9	gi|479326165|ref|YP_007866220.1|	-	6.8e-08	31.8	0.2	9.6e-08	31.3	0.1	1.2	1	0	0	1	1	1	1	Bifunctional	nuclease
Ribosomal_S7	PF00177.16	gi|479326166|ref|YP_007866221.1|	-	4.9e-47	159.2	0.1	5.7e-47	159.0	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S7p/S5e
GTP_EFTU	PF00009.22	gi|479326167|ref|YP_007866222.1|	-	8.2e-56	188.4	0.0	1.1e-55	187.9	0.0	1.2	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D3	PF03143.12	gi|479326167|ref|YP_007866222.1|	-	2.5e-31	107.7	0.1	1.1e-30	105.7	0.0	2.1	2	0	0	2	2	2	1	Elongation	factor	Tu	C-terminal	domain
GTP_EFTU_D2	PF03144.20	gi|479326167|ref|YP_007866222.1|	-	1.1e-20	73.4	5.1	6.3e-20	71.0	2.2	2.6	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
GTP_EFTU_D4	PF14578.1	gi|479326167|ref|YP_007866222.1|	-	8.1e-09	35.0	3.0	2.1e-08	33.6	2.1	1.7	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	4
MMR_HSR1	PF01926.18	gi|479326167|ref|YP_007866222.1|	-	1.3e-06	28.3	0.1	3e-06	27.1	0.0	1.7	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
Miro	PF08477.8	gi|479326167|ref|YP_007866222.1|	-	0.00022	21.7	0.1	0.0024	18.3	0.0	2.3	1	1	0	1	1	1	1	Miro-like	protein
SRPRB	PF09439.5	gi|479326167|ref|YP_007866222.1|	-	0.0028	16.8	0.1	1.4	8.0	0.0	2.3	1	1	0	2	2	2	2	Signal	recognition	particle	receptor	beta	subunit
Septin	PF00735.13	gi|479326167|ref|YP_007866222.1|	-	0.006	15.6	0.1	0.024	13.6	0.0	1.9	1	1	0	1	1	1	1	Septin
Dynamin_N	PF00350.18	gi|479326167|ref|YP_007866222.1|	-	0.025	14.3	0.0	3.5	7.4	0.0	2.5	1	1	1	2	2	2	0	Dynamin	family
Ribosomal_S10	PF00338.17	gi|479326168|ref|YP_007866223.1|	-	7.8e-30	102.5	0.1	8.7e-30	102.4	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S10p/S20e
DUF1464	PF07318.7	gi|479326171|ref|YP_007866226.1|	-	5.1e-90	301.7	0.1	8e-89	297.8	0.1	2.1	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1464)
NTP_transf_2	PF01909.18	gi|479326172|ref|YP_007866227.1|	-	4.6e-06	26.8	0.2	1.1e-05	25.6	0.2	1.7	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
CitG	PF01874.11	gi|479326173|ref|YP_007866228.1|	-	2.9e-44	151.3	0.0	3.3e-44	151.1	0.0	1.0	1	0	0	1	1	1	1	ATP:dephospho-CoA	triphosphoribosyl	transferase
vWA-TerF-like	PF10138.4	gi|479326173|ref|YP_007866228.1|	-	0.032	14.0	0.1	0.054	13.3	0.1	1.3	1	0	0	1	1	1	0	vWA	found	in	TerF	C	terminus
Metallophos_3	PF14582.1	gi|479326174|ref|YP_007866229.1|	-	3.9e-07	29.4	0.1	3.7e-06	26.2	0.0	1.9	1	1	1	2	2	2	1	Metallophosphoesterase,	calcineurin	superfamily
Metallophos_2	PF12850.2	gi|479326174|ref|YP_007866229.1|	-	0.00067	19.5	0.0	0.00081	19.2	0.0	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Acetyltransf_1	PF00583.19	gi|479326175|ref|YP_007866230.1|	-	3.1e-20	71.9	0.0	4.5e-20	71.4	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_4	PF13420.1	gi|479326175|ref|YP_007866230.1|	-	1.1e-09	38.4	0.8	2.2e-09	37.4	0.6	1.6	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|479326175|ref|YP_007866230.1|	-	3.1e-09	36.9	0.0	4.5e-09	36.4	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.1	gi|479326175|ref|YP_007866230.1|	-	3.6e-09	36.6	0.0	5.7e-09	36.0	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.1	gi|479326175|ref|YP_007866230.1|	-	4.1e-09	36.4	0.0	6.8e-09	35.7	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|479326175|ref|YP_007866230.1|	-	3.1e-08	33.2	0.1	5e-08	32.5	0.0	1.3	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_3	PF13302.1	gi|479326175|ref|YP_007866230.1|	-	1.2e-07	31.9	0.0	2.9e-07	30.7	0.0	1.5	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|479326175|ref|YP_007866230.1|	-	1e-06	28.6	0.1	3.6e-06	26.8	0.0	1.9	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_13	PF13880.1	gi|479326175|ref|YP_007866230.1|	-	0.006	16.3	0.0	0.011	15.4	0.0	1.4	1	0	0	1	1	1	1	ESCO1/2	acetyl-transferase
Acetyltransf_CG	PF14542.1	gi|479326175|ref|YP_007866230.1|	-	0.051	13.4	0.0	0.093	12.6	0.0	1.4	1	0	0	1	1	1	0	GCN5-related	N-acetyl-transferase
DFP	PF04127.10	gi|479326176|ref|YP_007866231.1|	-	1.5e-55	187.6	0.0	2e-53	180.8	0.0	2.2	2	0	0	2	2	2	2	DNA	/	pantothenate	metabolism	flavoprotein
Flavoprotein	PF02441.14	gi|479326176|ref|YP_007866231.1|	-	2.6e-31	107.9	0.6	4.9e-31	107.0	0.4	1.5	1	0	0	1	1	1	1	Flavoprotein
Radical_SAM	PF04055.16	gi|479326176|ref|YP_007866231.1|	-	0.009	16.1	0.4	0.019	15.1	0.3	1.5	1	0	0	1	1	1	1	Radical	SAM	superfamily
PGM_PMM_I	PF02878.11	gi|479326177|ref|YP_007866232.1|	-	4.9e-45	152.4	0.0	1.4e-44	150.9	0.0	1.8	1	1	1	2	2	2	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_II	PF02879.11	gi|479326177|ref|YP_007866232.1|	-	3.8e-21	75.3	0.0	7.5e-21	74.4	0.0	1.5	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_III	PF02880.11	gi|479326177|ref|YP_007866232.1|	-	1.9e-16	60.0	0.0	4.7e-16	58.8	0.0	1.7	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_IV	PF00408.15	gi|479326177|ref|YP_007866232.1|	-	4.2e-10	39.4	0.1	1.2e-09	38.0	0.1	1.8	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
DUF3083	PF11281.3	gi|479326177|ref|YP_007866232.1|	-	0.094	11.8	0.1	0.15	11.1	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3083)
Trm112p	PF03966.11	gi|479326178|ref|YP_007866233.1|	-	1e-16	61.0	2.4	1.4e-16	60.6	1.7	1.2	1	0	0	1	1	1	1	Trm112p-like	protein
Pico_P2A	PF00947.14	gi|479326178|ref|YP_007866233.1|	-	0.066	13.0	0.1	0.076	12.8	0.0	1.3	1	0	0	1	1	1	0	Picornavirus	core	protein	2A
PHD	PF00628.24	gi|479326178|ref|YP_007866233.1|	-	0.51	10.0	4.0	0.57	9.9	0.6	2.3	2	0	0	2	2	2	0	PHD-finger
DUF164	PF02591.10	gi|479326178|ref|YP_007866233.1|	-	2.7	7.8	5.5	2.2	8.1	0.8	2.7	2	1	1	3	3	3	0	Putative	zinc	ribbon	domain
DUF2153	PF09921.4	gi|479326179|ref|YP_007866234.1|	-	8.3e-59	196.7	8.2	9.4e-59	196.5	5.7	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2153)
DUF1912	PF08930.5	gi|479326179|ref|YP_007866234.1|	-	0.059	13.4	1.2	6.6	6.9	0.1	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1912)
Beta-Casp	PF10996.3	gi|479326179|ref|YP_007866234.1|	-	0.095	12.6	0.4	0.13	12.1	0.3	1.2	1	0	0	1	1	1	0	Beta-Casp	domain
VPR	PF00522.13	gi|479326179|ref|YP_007866234.1|	-	0.099	12.4	0.5	0.25	11.1	0.2	1.9	1	1	0	1	1	1	0	VPR/VPX	protein
UPF0728	PF15092.1	gi|479326179|ref|YP_007866234.1|	-	0.12	12.3	0.0	0.39	10.6	0.0	1.7	1	1	1	2	2	2	0	Uncharacterised	protein	family	UPF0728
DUF4248	PF14053.1	gi|479326179|ref|YP_007866234.1|	-	0.25	10.9	1.6	1.6	8.3	0.0	2.5	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4248)
zf-CpG_bind_C	PF12269.3	gi|479326179|ref|YP_007866234.1|	-	0.27	10.6	1.5	0.49	9.8	0.2	1.8	1	1	1	2	2	2	0	CpG	binding	protein	zinc	finger	C	terminal	domain
DUF1411	PF07199.6	gi|479326180|ref|YP_007866235.1|	-	0.0017	17.8	1.3	0.0019	17.6	0.9	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1411)
OMPdecase	PF00215.19	gi|479326181|ref|YP_007866236.1|	-	2.6e-20	72.7	2.8	3.5e-20	72.3	2.0	1.2	1	0	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
QRPTase_C	PF01729.14	gi|479326181|ref|YP_007866236.1|	-	0.0014	18.1	1.9	0.0022	17.5	0.4	2.0	1	1	1	2	2	2	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
PEP_mutase	PF13714.1	gi|479326181|ref|YP_007866236.1|	-	0.015	14.5	0.1	0.041	13.0	0.0	1.7	2	0	0	2	2	2	0	Phosphoenolpyruvate	phosphomutase
Ribul_P_3_epim	PF00834.14	gi|479326181|ref|YP_007866236.1|	-	0.023	13.7	0.1	0.28	10.2	0.0	2.3	1	1	1	2	2	2	0	Ribulose-phosphate	3	epimerase	family
TIM-br_sig_trns	PF09370.5	gi|479326181|ref|YP_007866236.1|	-	0.031	13.3	0.1	0.048	12.7	0.0	1.4	1	0	0	1	1	1	0	TIM-barrel	signal	transduction	protein
Vitellogenin_N	PF01347.17	gi|479326181|ref|YP_007866236.1|	-	0.048	11.8	0.0	0.067	11.4	0.0	1.1	1	0	0	1	1	1	0	Lipoprotein	amino	terminal	region
CTP_synth_N	PF06418.9	gi|479326182|ref|YP_007866237.1|	-	1.7e-112	375.0	3.2	2.3e-112	374.5	2.2	1.2	1	0	0	1	1	1	1	CTP	synthase	N-terminus
GATase	PF00117.23	gi|479326182|ref|YP_007866237.1|	-	1e-49	168.5	0.0	1.7e-49	167.8	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|479326182|ref|YP_007866237.1|	-	8.3e-12	45.0	0.0	4e-11	42.7	0.0	2.0	1	1	1	2	2	2	1	Peptidase	C26
CbiA	PF01656.18	gi|479326182|ref|YP_007866237.1|	-	0.031	13.6	0.0	0.051	12.9	0.0	1.4	1	0	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
HTH_5	PF01022.15	gi|479326183|ref|YP_007866238.1|	-	5.6e-13	48.3	0.8	7.5e-12	44.7	0.4	2.0	1	1	1	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|479326183|ref|YP_007866238.1|	-	8.3e-12	44.7	0.0	1e-11	44.4	0.0	1.1	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|479326183|ref|YP_007866238.1|	-	5.7e-07	29.1	0.4	5.7e-06	25.9	0.1	2.0	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_34	PF13601.1	gi|479326183|ref|YP_007866238.1|	-	1.8e-06	27.9	0.2	3.1e-06	27.1	0.1	1.5	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR	PF01047.17	gi|479326183|ref|YP_007866238.1|	-	4.3e-06	26.3	0.4	7.6e-06	25.5	0.3	1.5	1	1	0	1	1	1	1	MarR	family
HTH_24	PF13412.1	gi|479326183|ref|YP_007866238.1|	-	6.1e-06	25.5	0.8	8.5e-06	25.0	0.1	1.6	2	0	0	2	2	1	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.2	gi|479326183|ref|YP_007866238.1|	-	1.1e-05	25.0	0.0	1.4e-05	24.6	0.0	1.2	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.1	gi|479326183|ref|YP_007866238.1|	-	0.00016	21.9	0.0	0.00056	20.1	0.0	1.8	1	1	0	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_11	PF08279.7	gi|479326183|ref|YP_007866238.1|	-	0.00021	20.8	0.2	0.00039	20.0	0.1	1.6	1	0	0	1	1	1	1	HTH	domain
HTH_36	PF13730.1	gi|479326183|ref|YP_007866238.1|	-	0.00044	20.3	0.1	0.00076	19.5	0.1	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
Cdc6_C	PF09079.6	gi|479326183|ref|YP_007866238.1|	-	0.00095	18.8	0.3	0.0017	18.0	0.1	1.6	2	0	0	2	2	2	1	CDC6,	C	terminal
HTH_41	PF14502.1	gi|479326183|ref|YP_007866238.1|	-	0.0017	17.8	0.3	0.0055	16.2	0.0	1.9	2	1	0	2	2	2	1	Helix-turn-helix	domain
HTH_IclR	PF09339.5	gi|479326183|ref|YP_007866238.1|	-	0.0023	17.5	0.0	0.0036	16.8	0.0	1.4	1	1	0	1	1	1	1	IclR	helix-turn-helix	domain
DUF4423	PF14394.1	gi|479326183|ref|YP_007866238.1|	-	0.0026	17.2	0.4	0.0043	16.6	0.3	1.4	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
UPF0122	PF04297.9	gi|479326183|ref|YP_007866238.1|	-	0.0028	17.6	0.1	0.0034	17.3	0.1	1.2	1	0	0	1	1	1	1	Putative	helix-turn-helix	protein,	YlxM	/	p13	like
DUF2250	PF10007.4	gi|479326183|ref|YP_007866238.1|	-	0.0059	16.4	0.5	0.0079	16.0	0.4	1.2	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Fe_dep_repress	PF01325.14	gi|479326183|ref|YP_007866238.1|	-	0.0098	15.8	0.5	0.035	14.0	0.1	1.9	1	1	1	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Rrf2	PF02082.15	gi|479326183|ref|YP_007866238.1|	-	0.018	15.1	0.1	0.026	14.6	0.1	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
DUF4393	PF14337.1	gi|479326183|ref|YP_007866238.1|	-	0.019	14.4	0.5	0.024	14.1	0.3	1.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4393)
Sigma70_r4	PF04545.11	gi|479326183|ref|YP_007866238.1|	-	0.031	13.5	0.0	0.053	12.8	0.0	1.3	1	0	0	1	1	1	0	Sigma-70,	region	4
GntR	PF00392.16	gi|479326183|ref|YP_007866238.1|	-	0.034	13.5	0.0	0.061	12.7	0.0	1.5	1	1	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
NUMOD1	PF07453.8	gi|479326183|ref|YP_007866238.1|	-	0.06	13.2	0.3	0.15	11.9	0.2	1.7	1	0	0	1	1	1	0	NUMOD1	domain
LexA_DNA_bind	PF01726.11	gi|479326183|ref|YP_007866238.1|	-	0.078	12.5	0.0	0.13	11.8	0.0	1.4	1	0	0	1	1	1	0	LexA	DNA	binding	domain
RPA_C	PF08784.6	gi|479326183|ref|YP_007866238.1|	-	0.089	13.2	0.0	0.13	12.6	0.0	1.4	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
B-block_TFIIIC	PF04182.7	gi|479326183|ref|YP_007866238.1|	-	0.13	12.1	0.1	0.41	10.5	0.0	1.8	1	1	1	2	2	2	0	B-block	binding	subunit	of	TFIIIC
HTH_1	PF00126.22	gi|479326183|ref|YP_007866238.1|	-	0.16	11.7	0.0	0.23	11.2	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
LSM	PF01423.17	gi|479326184|ref|YP_007866239.1|	-	3.5e-19	68.1	0.2	4.2e-19	67.8	0.1	1.1	1	0	0	1	1	1	1	LSM	domain
SM-ATX	PF14438.1	gi|479326184|ref|YP_007866239.1|	-	0.092	12.6	0.0	0.12	12.3	0.0	1.2	1	0	0	1	1	1	0	Ataxin	2	SM	domain
AdoMet_Synthase	PF01941.14	gi|479326185|ref|YP_007866240.1|	-	3.6e-173	575.5	3.6	4.1e-173	575.4	2.5	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	synthetase	(AdoMet	synthetase)
LRR_4	PF12799.2	gi|479326185|ref|YP_007866240.1|	-	0.14	11.8	0.5	9.1	6.0	0.1	3.0	3	0	0	3	3	3	0	Leucine	Rich	repeats	(2	copies)
DUF460	PF04312.8	gi|479326186|ref|YP_007866241.1|	-	3.2e-51	172.4	0.9	8.5e-51	171.1	0.6	1.8	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF460)
Cep57_CLD_2	PF14197.1	gi|479326186|ref|YP_007866241.1|	-	0.76	9.7	20.3	0.092	12.7	1.8	4.0	3	1	1	4	4	4	0	Centrosome	localisation	domain	of	PPC89
RIO1	PF01163.17	gi|479326187|ref|YP_007866242.1|	-	1e-43	148.9	0.0	1.4e-43	148.5	0.0	1.2	1	0	0	1	1	1	1	RIO1	family
APH	PF01636.18	gi|479326187|ref|YP_007866242.1|	-	2e-08	34.3	0.0	4.5e-05	23.2	0.0	2.1	1	1	1	2	2	2	2	Phosphotransferase	enzyme	family
Pkinase	PF00069.20	gi|479326187|ref|YP_007866242.1|	-	1e-07	31.3	0.1	1.8e-07	30.5	0.0	1.4	1	1	0	1	1	1	1	Protein	kinase	domain
Rio2_N	PF09202.6	gi|479326187|ref|YP_007866242.1|	-	0.00019	21.4	0.3	0.001	19.0	0.0	2.2	1	1	1	2	2	2	1	Rio2,	N-terminal
Kdo	PF06293.9	gi|479326187|ref|YP_007866242.1|	-	0.00027	20.0	0.1	0.47	9.4	0.0	2.1	2	0	0	2	2	2	2	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
Choline_kinase	PF01633.15	gi|479326187|ref|YP_007866242.1|	-	0.01	15.4	0.2	0.46	10.0	0.1	2.2	1	1	1	2	2	2	0	Choline/ethanolamine	kinase
FbpA	PF05833.6	gi|479326188|ref|YP_007866243.1|	-	1.7e-34	119.1	20.0	1.7e-34	119.1	13.8	1.4	2	0	0	2	2	2	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
DUF814	PF05670.8	gi|479326188|ref|YP_007866243.1|	-	3.5e-26	90.8	0.1	8.1e-26	89.7	0.1	1.7	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF814)
Tweety	PF04906.8	gi|479326188|ref|YP_007866243.1|	-	1.3	7.4	5.1	0.56	8.5	1.0	1.9	1	1	1	2	2	2	0	Tweety
AKNA	PF12443.3	gi|479326188|ref|YP_007866243.1|	-	3	7.8	7.4	0.13	12.2	0.9	1.7	2	0	0	2	2	2	0	AT-hook-containing	transcription	factor
DUF92	PF01940.11	gi|479326189|ref|YP_007866244.1|	-	0.003	16.7	0.5	0.0039	16.3	0.3	1.1	1	0	0	1	1	1	1	Integral	membrane	protein	DUF92
DUF1430	PF07242.6	gi|479326189|ref|YP_007866244.1|	-	0.023	14.7	3.0	0.023	14.7	2.1	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1430)
DUF2232	PF09991.4	gi|479326189|ref|YP_007866244.1|	-	0.079	11.9	10.1	0.098	11.6	7.0	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2232)
DUF543	PF04418.7	gi|479326189|ref|YP_007866244.1|	-	0.089	12.7	0.3	0.089	12.7	0.2	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF543)
IncA	PF04156.9	gi|479326189|ref|YP_007866244.1|	-	0.39	10.3	3.5	0.56	9.7	2.4	1.1	1	0	0	1	1	1	0	IncA	protein
Ndc1_Nup	PF09531.5	gi|479326189|ref|YP_007866244.1|	-	1.9	6.7	6.1	2.3	6.5	4.2	1.1	1	0	0	1	1	1	0	Nucleoporin	protein	Ndc1-Nup
DUF4131	PF13567.1	gi|479326189|ref|YP_007866244.1|	-	5.1	6.4	5.9	6.7	6.0	4.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
Mut7-C	PF01927.11	gi|479326190|ref|YP_007866245.1|	-	8.9e-37	126.3	5.2	2.4e-35	121.6	3.6	2.1	1	1	0	1	1	1	1	Mut7-C	RNAse	domain
OrfB_Zn_ribbon	PF07282.6	gi|479326190|ref|YP_007866245.1|	-	0.0024	17.4	3.1	0.0028	17.2	1.0	1.8	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
DZR	PF12773.2	gi|479326190|ref|YP_007866245.1|	-	0.0097	15.7	0.5	0.016	14.9	0.4	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc-ribbons_6	PF07191.7	gi|479326190|ref|YP_007866245.1|	-	0.011	15.4	0.7	0.02	14.7	0.5	1.3	1	0	0	1	1	1	0	zinc-ribbons
Zn_Tnp_IS1595	PF12760.2	gi|479326190|ref|YP_007866245.1|	-	0.017	14.9	2.0	0.032	14.0	1.4	1.4	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
IBR	PF01485.16	gi|479326190|ref|YP_007866245.1|	-	0.023	14.5	0.6	0.04	13.7	0.4	1.3	1	0	0	1	1	1	0	IBR	domain
HypA	PF01155.14	gi|479326190|ref|YP_007866245.1|	-	0.026	14.1	0.1	0.032	13.8	0.1	1.3	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
NRDD	PF13597.1	gi|479326190|ref|YP_007866245.1|	-	0.035	12.2	0.3	2.1	6.3	0.1	2.0	2	0	0	2	2	2	0	Anaerobic	ribonucleoside-triphosphate	reductase
zinc_ribbon_5	PF13719.1	gi|479326190|ref|YP_007866245.1|	-	0.04	13.5	2.4	4.1	7.0	0.2	2.8	3	0	0	3	3	3	0	zinc-ribbon	domain
zf-ISL3	PF14690.1	gi|479326190|ref|YP_007866245.1|	-	0.049	13.6	3.4	1.3	9.1	0.5	2.6	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Rpr2	PF04032.11	gi|479326190|ref|YP_007866245.1|	-	0.06	13.2	1.9	0.15	11.9	1.2	1.8	1	1	0	1	1	1	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
Rep_fac-A_C	PF08646.5	gi|479326190|ref|YP_007866245.1|	-	0.063	12.9	3.0	0.11	12.2	2.0	1.5	1	1	0	1	1	1	0	Replication	factor-A	C	terminal	domain
C1_1	PF00130.17	gi|479326190|ref|YP_007866245.1|	-	0.07	12.8	0.7	0.12	12.1	0.5	1.3	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
zinc_ribbon_4	PF13717.1	gi|479326190|ref|YP_007866245.1|	-	0.1	12.3	3.1	3.4	7.4	0.2	2.6	2	0	0	2	2	2	0	zinc-ribbon	domain
UPF0547	PF10571.4	gi|479326190|ref|YP_007866245.1|	-	0.23	11.1	2.9	3.1	7.5	0.0	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
Zn-ribbon_8	PF09723.5	gi|479326190|ref|YP_007866245.1|	-	0.29	11.1	4.3	1.7	8.6	3.1	2.0	1	1	1	2	2	2	0	Zinc	ribbon	domain
zinc_ribbon_2	PF13240.1	gi|479326190|ref|YP_007866245.1|	-	0.38	10.3	4.9	5.9	6.5	1.1	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-MIZ	PF02891.15	gi|479326190|ref|YP_007866245.1|	-	0.67	9.5	5.7	3.5	7.2	4.3	1.9	1	1	1	2	2	2	0	MIZ/SP-RING	zinc	finger
zf-H2C2_2	PF13465.1	gi|479326190|ref|YP_007866245.1|	-	0.71	10.2	2.8	1.9	8.9	0.2	2.2	2	0	0	2	2	2	0	Zinc-finger	double	domain
PhnA_Zn_Ribbon	PF08274.7	gi|479326190|ref|YP_007866245.1|	-	0.92	9.3	5.5	4.9	7.0	3.8	2.0	1	1	0	1	1	1	0	PhnA	Zinc-Ribbon
zf-RING_4	PF14570.1	gi|479326190|ref|YP_007866245.1|	-	1.6	8.3	7.8	48	3.6	5.5	2.3	1	1	1	2	2	2	0	RING/Ubox	like	zinc-binding	domain
zf-HIT	PF04438.11	gi|479326190|ref|YP_007866245.1|	-	2.4	7.8	5.8	3.3	7.4	0.6	2.2	2	0	0	2	2	2	0	HIT	zinc	finger
DNA_ligase_ZBD	PF03119.11	gi|479326190|ref|YP_007866245.1|	-	2.7	7.7	4.7	2.6	7.8	0.2	2.5	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
AMMECR1	PF01871.12	gi|479326191|ref|YP_007866246.1|	-	1.2e-56	190.5	0.0	1.4e-56	190.2	0.0	1.0	1	0	0	1	1	1	1	AMMECR1
Thioredoxin_3	PF13192.1	gi|479326192|ref|YP_007866247.1|	-	8.3e-32	108.8	2.4	4.6e-17	61.5	1.2	2.3	2	0	0	2	2	2	2	Thioredoxin	domain
Thioredoxin_2	PF13098.1	gi|479326192|ref|YP_007866247.1|	-	1.2e-05	25.4	3.9	0.033	14.3	0.2	4.0	2	2	0	2	2	2	2	Thioredoxin-like	domain
Thioredoxin	PF00085.15	gi|479326192|ref|YP_007866247.1|	-	1.9e-05	24.2	0.9	0.038	13.6	0.2	2.3	2	0	0	2	2	2	2	Thioredoxin
Thioredoxin_5	PF13743.1	gi|479326192|ref|YP_007866247.1|	-	0.0056	16.2	0.0	0.11	12.0	0.0	2.4	2	0	0	2	2	2	1	Thioredoxin
TrbC_Ftype	PF09673.5	gi|479326192|ref|YP_007866247.1|	-	0.008	15.7	0.7	0.21	11.2	0.0	2.5	2	1	0	2	2	2	1	Type-F	conjugative	transfer	system	pilin	assembly	protein
Glutaredoxin	PF00462.19	gi|479326192|ref|YP_007866247.1|	-	0.028	14.4	6.4	3.8	7.5	0.0	3.5	2	1	0	2	2	2	0	Glutaredoxin
Thioredoxin_7	PF13899.1	gi|479326192|ref|YP_007866247.1|	-	0.043	13.8	0.4	1	9.4	0.0	2.4	2	0	0	2	2	2	0	Thioredoxin-like
Thioredoxin_4	PF13462.1	gi|479326192|ref|YP_007866247.1|	-	0.058	13.4	8.1	1.7	8.6	0.2	3.6	2	2	2	4	4	4	0	Thioredoxin
PDDEXK_1	PF12705.2	gi|479326192|ref|YP_007866247.1|	-	0.081	12.2	0.0	8.6	5.6	0.0	2.2	2	0	0	2	2	2	0	PD-(D/E)XK	nuclease	superfamily
RHH_1	PF01402.16	gi|479326193|ref|YP_007866248.1|	-	0.00013	21.7	0.3	0.00057	19.6	0.1	2.2	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
AAA_13	PF13166.1	gi|479326193|ref|YP_007866248.1|	-	0.00027	19.5	2.8	0.00027	19.5	1.9	1.9	2	0	0	2	2	2	1	AAA	domain
DUF3782	PF12644.2	gi|479326193|ref|YP_007866248.1|	-	0.0011	18.7	0.1	1.3	8.8	0.0	2.8	2	1	0	2	2	2	2	Protein	of	unknown	function	(DUF3782)
Herpes_UL6	PF01763.11	gi|479326193|ref|YP_007866248.1|	-	0.003	15.7	2.5	0.0042	15.3	1.7	1.2	1	0	0	1	1	1	1	Herpesvirus	UL6	like
Matrilin_ccoil	PF10393.4	gi|479326193|ref|YP_007866248.1|	-	0.015	14.6	0.1	0.038	13.3	0.1	1.7	1	0	0	1	1	1	0	Trimeric	coiled-coil	oligomerisation	domain	of	matrilin
TBPIP	PF07106.8	gi|479326193|ref|YP_007866248.1|	-	0.015	14.8	5.9	0.015	14.8	4.1	1.8	2	0	0	2	2	2	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
DUF904	PF06005.7	gi|479326193|ref|YP_007866248.1|	-	0.035	14.3	1.9	0.035	14.3	1.3	2.4	3	0	0	3	3	2	0	Protein	of	unknown	function	(DUF904)
DUF1664	PF07889.7	gi|479326193|ref|YP_007866248.1|	-	0.036	13.8	2.7	0.082	12.7	1.9	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
DUF972	PF06156.8	gi|479326193|ref|YP_007866248.1|	-	0.049	13.9	2.1	0.13	12.6	1.4	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF972)
Allexi_40kDa	PF05549.6	gi|479326193|ref|YP_007866248.1|	-	0.062	12.5	3.8	0.039	13.2	0.9	1.8	2	0	0	2	2	2	0	Allexivirus	40kDa	protein
Uds1	PF15456.1	gi|479326193|ref|YP_007866248.1|	-	0.068	13.1	2.1	0.088	12.8	0.4	2.0	2	0	0	2	2	2	0	Up-regulated	During	Septation
IncA	PF04156.9	gi|479326193|ref|YP_007866248.1|	-	0.069	12.7	3.0	0.059	12.9	0.9	1.7	1	1	0	1	1	1	0	IncA	protein
Prefoldin_3	PF13758.1	gi|479326193|ref|YP_007866248.1|	-	0.12	12.2	5.3	0.062	13.0	1.5	2.3	2	1	0	2	2	2	0	Prefoldin	subunit
DUF3573	PF12097.3	gi|479326193|ref|YP_007866248.1|	-	0.13	10.8	2.2	0.21	10.1	1.5	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3573)
YscO	PF07321.7	gi|479326193|ref|YP_007866248.1|	-	0.24	11.2	2.3	0.16	11.7	0.2	1.8	2	0	0	2	2	2	0	Type	III	secretion	protein	YscO
DivIC	PF04977.10	gi|479326193|ref|YP_007866248.1|	-	0.42	10.1	5.0	1.5	8.4	0.3	3.1	3	0	0	3	3	3	0	Septum	formation	initiator
DUF3373	PF11853.3	gi|479326193|ref|YP_007866248.1|	-	0.43	9.0	4.9	0.86	8.0	3.4	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3373)
FliD_N	PF02465.13	gi|479326193|ref|YP_007866248.1|	-	0.5	10.7	3.9	0.45	10.8	1.3	1.9	2	0	0	2	2	2	0	Flagellar	hook-associated	protein	2	N-terminus
PspB	PF06667.7	gi|479326193|ref|YP_007866248.1|	-	0.52	10.2	5.1	1.1	9.1	0.3	2.8	3	0	0	3	3	3	0	Phage	shock	protein	B
Fib_alpha	PF08702.5	gi|479326193|ref|YP_007866248.1|	-	1.8	8.7	9.1	0.65	10.1	3.1	2.3	1	1	1	2	2	2	0	Fibrinogen	alpha/beta	chain	family
Snapin_Pallidin	PF14712.1	gi|479326193|ref|YP_007866248.1|	-	2.2	8.6	6.0	0.74	10.1	1.7	2.1	2	0	0	2	2	2	0	Snapin/Pallidin
Tropomyosin_1	PF12718.2	gi|479326193|ref|YP_007866248.1|	-	2.5	7.9	8.9	0.3	10.9	2.3	2.2	2	0	0	2	2	2	0	Tropomyosin	like
bZIP_1	PF00170.16	gi|479326193|ref|YP_007866248.1|	-	3.2	7.7	5.5	0.65	10.0	0.3	2.4	2	0	0	2	2	2	0	bZIP	transcription	factor
dUTPase	PF00692.14	gi|479326194|ref|YP_007866249.1|	-	5.6e-20	71.1	0.0	7.3e-20	70.7	0.0	1.1	1	0	0	1	1	1	1	dUTPase
DCD	PF06559.6	gi|479326194|ref|YP_007866249.1|	-	0.0012	17.3	0.0	0.031	12.6	0.0	2.3	2	1	0	2	2	2	2	2'-deoxycytidine	5'-triphosphate	deaminase	(DCD)
DNA_ligase_A_M	PF01068.16	gi|479326195|ref|YP_007866250.1|	-	9.2e-61	204.7	0.9	1.5e-60	204.0	0.6	1.3	1	0	0	1	1	1	1	ATP	dependent	DNA	ligase	domain
DNA_ligase_A_N	PF04675.9	gi|479326195|ref|YP_007866250.1|	-	2.7e-54	183.6	0.5	5e-54	182.8	0.3	1.5	1	0	0	1	1	1	1	DNA	ligase	N	terminus
DNA_ligase_A_C	PF04679.10	gi|479326195|ref|YP_007866250.1|	-	1.9e-26	92.2	0.0	3.6e-26	91.4	0.0	1.5	1	0	0	1	1	1	1	ATP	dependent	DNA	ligase	C	terminal	region
DNA_ligase_OB_2	PF14743.1	gi|479326195|ref|YP_007866250.1|	-	0.051	13.2	1.2	1.2	8.8	0.8	2.7	1	1	0	1	1	1	0	DNA	ligase	OB-like	domain
DRMBL	PF07522.9	gi|479326196|ref|YP_007866251.1|	-	6.4e-05	22.9	0.3	0.00011	22.1	0.2	1.3	1	0	0	1	1	1	1	DNA	repair	metallo-beta-lactamase
RMMBL	PF07521.7	gi|479326196|ref|YP_007866251.1|	-	0.0019	17.9	0.0	0.0038	17.0	0.0	1.5	1	0	0	1	1	1	1	RNA-metabolising	metallo-beta-lactamase
DAO	PF01266.19	gi|479326197|ref|YP_007866252.1|	-	3.1e-49	167.7	0.0	3.6e-49	167.5	0.0	1.0	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
NAD_binding_9	PF13454.1	gi|479326197|ref|YP_007866252.1|	-	1.9e-05	24.4	0.0	0.0065	16.2	0.0	2.2	2	0	0	2	2	2	2	FAD-NAD(P)-binding
GIDA	PF01134.17	gi|479326197|ref|YP_007866252.1|	-	3.4e-05	22.8	0.0	0.00087	18.2	0.0	2.2	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
Pyr_redox_3	PF13738.1	gi|479326197|ref|YP_007866252.1|	-	0.00026	21.1	0.0	0.00043	20.4	0.0	1.5	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|479326197|ref|YP_007866252.1|	-	0.001	19.0	0.0	0.0021	18.0	0.0	1.6	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_2	PF07992.9	gi|479326197|ref|YP_007866252.1|	-	0.0012	18.7	0.2	1.1	9.1	0.0	2.5	2	1	1	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Trp_halogenase	PF04820.9	gi|479326197|ref|YP_007866252.1|	-	0.012	14.3	0.0	0.55	8.7	0.0	2.1	2	0	0	2	2	2	0	Tryptophan	halogenase
Thi4	PF01946.12	gi|479326197|ref|YP_007866252.1|	-	0.014	14.4	0.0	0.029	13.4	0.0	1.5	1	0	0	1	1	1	0	Thi4	family
GIIM	PF08388.6	gi|479326197|ref|YP_007866252.1|	-	0.018	14.8	0.0	0.046	13.5	0.0	1.7	1	0	0	1	1	1	0	Group	II	intron,	maturase-specific	domain
HI0933_like	PF03486.9	gi|479326197|ref|YP_007866252.1|	-	0.088	11.2	0.0	1.7	7.0	0.0	2.1	2	0	0	2	2	2	0	HI0933-like	protein
Lycopene_cycl	PF05834.7	gi|479326197|ref|YP_007866252.1|	-	0.15	10.9	0.0	1.1	8.0	0.0	1.9	2	0	0	2	2	2	0	Lycopene	cyclase	protein
Fer2_BFD	PF04324.10	gi|479326198|ref|YP_007866253.1|	-	3.8e-06	26.8	0.9	7e-06	25.9	0.6	1.4	1	0	0	1	1	1	1	BFD-like	[2Fe-2S]	binding	domain
Pyr_redox_3	PF13738.1	gi|479326198|ref|YP_007866253.1|	-	0.00045	20.3	0.0	0.13	12.2	0.0	2.7	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.9	gi|479326198|ref|YP_007866253.1|	-	0.0012	18.7	0.0	0.0087	15.9	0.0	2.4	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Phosphodiest	PF01663.17	gi|479326199|ref|YP_007866254.1|	-	1.6e-26	93.4	0.1	9.9e-15	54.7	0.0	2.0	2	0	0	2	2	2	2	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
PglZ	PF08665.7	gi|479326199|ref|YP_007866254.1|	-	0.039	13.6	0.1	4	7.0	0.0	2.5	2	0	0	2	2	2	0	PglZ	domain
RRM_2	PF04059.7	gi|479326200|ref|YP_007866255.1|	-	0.034	14.1	0.2	0.05	13.6	0.1	1.5	1	1	0	1	1	1	0	RNA	recognition	motif	2
HEM4	PF02602.10	gi|479326201|ref|YP_007866256.1|	-	2.9e-27	95.4	0.0	3.5e-27	95.1	0.0	1.2	1	0	0	1	1	1	1	Uroporphyrinogen-III	synthase	HemD
Porphobil_deam	PF01379.15	gi|479326202|ref|YP_007866257.1|	-	6.9e-51	172.2	0.2	8.3e-51	171.9	0.2	1.1	1	0	0	1	1	1	1	Porphobilinogen	deaminase,	dipyromethane	cofactor	binding	domain
Porphobil_deamC	PF03900.10	gi|479326202|ref|YP_007866257.1|	-	2e-07	30.9	0.0	5e-07	29.7	0.0	1.7	1	0	0	1	1	1	1	Porphobilinogen	deaminase,	C-terminal	domain
Aminotran_3	PF00202.16	gi|479326203|ref|YP_007866258.1|	-	5e-66	222.8	0.0	6.7e-66	222.4	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-III
ALAD	PF00490.16	gi|479326204|ref|YP_007866259.1|	-	1.3e-140	467.9	0.2	1.5e-140	467.7	0.2	1.0	1	0	0	1	1	1	1	Delta-aminolevulinic	acid	dehydratase
GlutR_N	PF05201.10	gi|479326205|ref|YP_007866260.1|	-	1.7e-33	115.3	0.3	4.5e-33	113.9	0.0	1.8	2	0	0	2	2	2	1	Glutamyl-tRNAGlu	reductase,	N-terminal	domain
Shikimate_DH	PF01488.15	gi|479326205|ref|YP_007866260.1|	-	6.6e-22	78.0	0.0	1.6e-21	76.8	0.0	1.7	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
GlutR_dimer	PF00745.15	gi|479326205|ref|YP_007866260.1|	-	2.4e-12	46.6	0.2	3.2e-11	43.0	0.0	2.4	1	1	1	2	2	2	1	Glutamyl-tRNAGlu	reductase,	dimerisation	domain
F420_oxidored	PF03807.12	gi|479326205|ref|YP_007866260.1|	-	8.2e-07	29.3	0.0	1.9e-06	28.1	0.0	1.7	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
ThiF	PF00899.16	gi|479326205|ref|YP_007866260.1|	-	3.5e-05	23.6	0.8	0.00036	20.3	0.0	2.7	3	1	0	3	3	3	1	ThiF	family
NAD_binding_2	PF03446.10	gi|479326205|ref|YP_007866260.1|	-	8.7e-05	22.4	0.2	0.00031	20.6	0.0	1.9	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
TrkA_N	PF02254.13	gi|479326205|ref|YP_007866260.1|	-	0.00017	21.5	0.4	0.00041	20.3	0.1	1.8	2	0	0	2	2	1	1	TrkA-N	domain
Saccharop_dh	PF03435.13	gi|479326205|ref|YP_007866260.1|	-	0.0002	20.4	0.0	0.0003	19.9	0.0	1.2	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|479326205|ref|YP_007866260.1|	-	0.00054	19.1	0.1	0.00095	18.3	0.1	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_7	PF13241.1	gi|479326205|ref|YP_007866260.1|	-	0.0012	19.0	0.0	0.0038	17.4	0.0	1.8	1	0	0	1	1	1	1	Putative	NAD(P)-binding
3HCDH_N	PF02737.13	gi|479326205|ref|YP_007866260.1|	-	0.0017	18.0	2.3	0.0019	17.8	0.0	2.2	3	0	0	3	3	3	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
GFO_IDH_MocA	PF01408.17	gi|479326205|ref|YP_007866260.1|	-	0.0021	18.5	0.0	0.0058	17.1	0.0	1.8	2	0	0	2	2	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
DapB_N	PF01113.15	gi|479326205|ref|YP_007866260.1|	-	0.0046	16.8	0.0	0.011	15.6	0.0	1.7	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
ELFV_dehydrog	PF00208.16	gi|479326205|ref|YP_007866260.1|	-	0.0061	16.1	0.0	0.015	14.8	0.0	1.6	1	0	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
DUF2115	PF09888.4	gi|479326205|ref|YP_007866260.1|	-	0.0069	16.5	3.0	0.0069	16.5	2.0	2.1	2	0	0	2	2	2	1	Uncharacterized	protein	conserved	in	archaea	(DUF2115)
ApbA	PF02558.11	gi|479326205|ref|YP_007866260.1|	-	0.0072	15.7	0.0	0.013	14.9	0.0	1.4	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
IlvN	PF07991.7	gi|479326205|ref|YP_007866260.1|	-	0.016	14.5	0.0	0.042	13.2	0.0	1.7	1	0	0	1	1	1	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
NAD_Gly3P_dh_N	PF01210.18	gi|479326205|ref|YP_007866260.1|	-	0.016	14.9	0.0	0.044	13.5	0.0	1.7	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
FAD_binding_3	PF01494.14	gi|479326205|ref|YP_007866260.1|	-	0.018	14.0	0.0	0.044	12.8	0.0	1.6	2	0	0	2	2	2	0	FAD	binding	domain
Thi4	PF01946.12	gi|479326205|ref|YP_007866260.1|	-	0.069	12.2	0.0	0.15	11.1	0.0	1.5	1	0	0	1	1	1	0	Thi4	family
NAD_binding_10	PF13460.1	gi|479326205|ref|YP_007866260.1|	-	0.085	12.8	0.0	0.14	12.1	0.0	1.3	1	0	0	1	1	1	0	NADH(P)-binding
adh_short	PF00106.20	gi|479326205|ref|YP_007866260.1|	-	0.11	12.4	0.0	0.18	11.6	0.0	1.3	1	0	0	1	1	1	0	short	chain	dehydrogenase
Semialdhyde_dh	PF01118.19	gi|479326205|ref|YP_007866260.1|	-	0.11	12.8	0.0	0.24	11.7	0.0	1.5	1	0	0	1	1	1	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
KR	PF08659.5	gi|479326205|ref|YP_007866260.1|	-	0.16	11.6	0.0	0.28	10.8	0.0	1.3	1	0	0	1	1	1	0	KR	domain
NAD_binding_7	PF13241.1	gi|479326206|ref|YP_007866261.1|	-	1.2e-26	92.9	0.2	2.6e-26	91.8	0.1	1.6	2	0	0	2	2	2	1	Putative	NAD(P)-binding
TrkA_N	PF02254.13	gi|479326206|ref|YP_007866261.1|	-	6.9e-06	26.0	0.9	3.1e-05	23.9	0.1	2.1	1	1	1	2	2	2	1	TrkA-N	domain
Pyr_redox	PF00070.22	gi|479326206|ref|YP_007866261.1|	-	0.00098	19.4	0.0	0.0024	18.2	0.0	1.8	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
AdoHcyase_NAD	PF00670.16	gi|479326206|ref|YP_007866261.1|	-	0.0013	18.5	0.3	0.042	13.7	0.1	2.3	2	1	0	2	2	2	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
Shikimate_DH	PF01488.15	gi|479326206|ref|YP_007866261.1|	-	0.0036	17.3	0.7	0.0098	15.9	0.1	2.0	2	1	0	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
GIDA	PF01134.17	gi|479326206|ref|YP_007866261.1|	-	0.027	13.3	0.0	0.046	12.5	0.0	1.5	2	0	0	2	2	2	0	Glucose	inhibited	division	protein	A
3HCDH_N	PF02737.13	gi|479326206|ref|YP_007866261.1|	-	0.042	13.4	0.0	0.064	12.9	0.0	1.4	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.14	gi|479326206|ref|YP_007866261.1|	-	0.049	12.7	0.0	0.074	12.1	0.0	1.3	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
TFIIE_alpha	PF02002.12	gi|479326206|ref|YP_007866261.1|	-	0.086	12.3	0.8	0.13	11.8	0.1	1.7	2	0	0	2	2	2	0	TFIIE	alpha	subunit
Pyr_redox_2	PF07992.9	gi|479326206|ref|YP_007866261.1|	-	0.088	12.6	0.4	0.21	11.4	0.2	1.7	1	1	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
AlaDh_PNT_C	PF01262.16	gi|479326206|ref|YP_007866261.1|	-	0.091	12.3	0.0	0.2	11.1	0.0	1.5	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
ApbA	PF02558.11	gi|479326206|ref|YP_007866261.1|	-	0.12	11.8	0.0	0.23	10.9	0.0	1.4	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
FAD_binding_3	PF01494.14	gi|479326206|ref|YP_007866261.1|	-	0.13	11.2	0.0	0.2	10.6	0.0	1.2	1	0	0	1	1	1	0	FAD	binding	domain
FAD_binding_2	PF00890.19	gi|479326206|ref|YP_007866261.1|	-	0.14	10.9	0.0	0.19	10.5	0.0	1.2	1	0	0	1	1	1	0	FAD	binding	domain
UDPG_MGDP_dh_N	PF03721.9	gi|479326206|ref|YP_007866261.1|	-	0.15	11.4	0.5	1.6	8.0	0.2	2.2	2	1	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
DAO	PF01266.19	gi|479326206|ref|YP_007866261.1|	-	0.17	10.7	0.2	0.24	10.2	0.1	1.2	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
ThiF	PF00899.16	gi|479326206|ref|YP_007866261.1|	-	0.65	9.8	4.3	4.6	7.0	0.2	2.3	1	1	1	2	2	2	0	ThiF	family
XPG_I	PF00867.13	gi|479326207|ref|YP_007866262.1|	-	8.2e-25	86.7	0.0	1.6e-24	85.7	0.0	1.5	1	0	0	1	1	1	1	XPG	I-region
XPG_N	PF00752.12	gi|479326207|ref|YP_007866262.1|	-	7.9e-11	42.1	0.0	1.8e-10	40.9	0.0	1.6	1	0	0	1	1	1	1	XPG	N-terminal	domain
5_3_exonuc	PF01367.15	gi|479326207|ref|YP_007866262.1|	-	8.2e-05	22.7	0.1	8.2e-05	22.7	0.1	2.0	2	1	0	2	2	2	1	5'-3'	exonuclease,	C-terminal	SAM	fold
DUF2458	PF10454.4	gi|479326207|ref|YP_007866262.1|	-	0.00013	21.8	1.7	0.001	18.9	0.2	2.5	2	1	1	3	3	3	1	Protein	of	unknown	function	(DUF2458)
PIN_2	PF10130.4	gi|479326207|ref|YP_007866262.1|	-	0.0033	17.4	0.7	0.15	12.0	0.1	2.3	2	0	0	2	2	2	1	PIN	domain
DUF2150	PF09920.4	gi|479326207|ref|YP_007866262.1|	-	0.26	10.8	2.5	0.13	11.8	0.2	1.5	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2150)
Ribosomal_S13	PF00416.17	gi|479326207|ref|YP_007866262.1|	-	0.34	11.3	4.2	0.29	11.6	0.5	2.6	2	2	1	3	3	3	0	Ribosomal	protein	S13/S18
La	PF05383.12	gi|479326208|ref|YP_007866263.1|	-	0.024	14.4	0.1	0.047	13.4	0.0	1.6	1	1	0	1	1	1	0	La	domain
Attachment_P66	PF11263.3	gi|479326208|ref|YP_007866263.1|	-	0.03	13.3	0.1	0.033	13.2	0.0	1.0	1	0	0	1	1	1	0	Borrelia	burgdorferi	attachment	protein	P66
p25-alpha	PF05517.7	gi|479326208|ref|YP_007866263.1|	-	0.042	14.0	0.1	0.047	13.9	0.0	1.1	1	0	0	1	1	1	0	p25-alpha
AAA	PF00004.24	gi|479326209|ref|YP_007866264.1|	-	1.1e-97	323.2	0.0	3.2e-48	163.2	0.0	2.5	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
CDC48_N	PF02359.13	gi|479326209|ref|YP_007866264.1|	-	2.2e-29	101.2	2.1	9.4e-29	99.2	0.8	2.5	2	0	0	2	2	2	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
RuvB_N	PF05496.7	gi|479326209|ref|YP_007866264.1|	-	5e-16	58.4	0.0	6.1e-08	31.9	0.0	2.7	2	1	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
CDC48_2	PF02933.12	gi|479326209|ref|YP_007866264.1|	-	6.5e-15	54.5	1.1	6.5e-15	54.5	0.8	2.0	2	0	0	2	2	1	1	Cell	division	protein	48	(CDC48),	domain	2
AAA_2	PF07724.9	gi|479326209|ref|YP_007866264.1|	-	9.5e-14	51.6	0.0	3e-06	27.2	0.0	3.3	3	0	0	3	3	3	2	AAA	domain	(Cdc48	subfamily)
AAA_22	PF13401.1	gi|479326209|ref|YP_007866264.1|	-	4e-13	49.6	0.3	0.00013	22.0	0.0	4.4	3	2	0	3	3	2	2	AAA	domain
AAA_5	PF07728.9	gi|479326209|ref|YP_007866264.1|	-	1.2e-12	47.7	1.2	0.00019	21.1	0.1	4.9	3	2	0	3	3	3	2	AAA	domain	(dynein-related	subfamily)
AAA_17	PF13207.1	gi|479326209|ref|YP_007866264.1|	-	4.2e-12	46.9	0.1	1.2e-05	26.1	0.0	3.2	2	1	0	2	2	2	2	AAA	domain
Zeta_toxin	PF06414.7	gi|479326209|ref|YP_007866264.1|	-	3.2e-11	42.7	0.5	0.0004	19.5	0.0	3.5	3	1	0	3	3	3	2	Zeta	toxin
AAA_16	PF13191.1	gi|479326209|ref|YP_007866264.1|	-	1e-10	41.8	0.0	0.00013	21.9	0.0	3.1	2	1	0	2	2	2	2	AAA	ATPase	domain
AAA_33	PF13671.1	gi|479326209|ref|YP_007866264.1|	-	1.3e-10	41.3	0.0	0.00086	19.1	0.0	2.9	2	0	0	2	2	2	2	AAA	domain
TIP49	PF06068.8	gi|479326209|ref|YP_007866264.1|	-	1.6e-10	40.3	1.4	0.00011	21.0	0.0	2.8	3	0	0	3	3	3	2	TIP49	C-terminus
IstB_IS21	PF01695.12	gi|479326209|ref|YP_007866264.1|	-	2.2e-10	40.2	0.0	0.00067	19.1	0.0	2.9	3	0	0	3	3	3	2	IstB-like	ATP	binding	protein
AAA_14	PF13173.1	gi|479326209|ref|YP_007866264.1|	-	1.5e-09	37.8	0.0	0.00087	19.1	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
AAA_18	PF13238.1	gi|479326209|ref|YP_007866264.1|	-	1.3e-08	35.2	0.1	0.0031	17.8	0.0	3.2	3	0	0	3	3	2	2	AAA	domain
Arch_ATPase	PF01637.13	gi|479326209|ref|YP_007866264.1|	-	5.1e-08	32.8	0.5	0.0022	17.7	0.0	4.2	2	2	2	4	4	4	1	Archaeal	ATPase
AAA_28	PF13521.1	gi|479326209|ref|YP_007866264.1|	-	1.8e-07	31.2	0.0	0.016	15.1	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
Mg_chelatase	PF01078.16	gi|479326209|ref|YP_007866264.1|	-	2.1e-07	30.3	0.7	0.007	15.5	0.1	2.5	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
RNA_helicase	PF00910.17	gi|479326209|ref|YP_007866264.1|	-	7.7e-07	29.2	0.0	0.017	15.2	0.0	2.7	2	0	0	2	2	2	2	RNA	helicase
Sigma54_activat	PF00158.21	gi|479326209|ref|YP_007866264.1|	-	1.1e-06	28.2	0.0	0.17	11.3	0.0	4.2	4	1	0	4	4	3	2	Sigma-54	interaction	domain
AAA_19	PF13245.1	gi|479326209|ref|YP_007866264.1|	-	5e-06	26.1	3.2	0.048	13.4	0.2	3.1	3	0	0	3	3	2	2	Part	of	AAA	domain
AAA_3	PF07726.6	gi|479326209|ref|YP_007866264.1|	-	6.6e-06	25.7	0.0	0.045	13.3	0.0	2.8	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_25	PF13481.1	gi|479326209|ref|YP_007866264.1|	-	8.3e-06	25.3	7.9	0.084	12.2	0.4	4.0	2	2	1	3	3	3	2	AAA	domain
ABC_tran	PF00005.22	gi|479326209|ref|YP_007866264.1|	-	8.3e-06	26.1	0.0	0.056	13.7	0.0	2.6	2	0	0	2	2	2	2	ABC	transporter
Sigma54_activ_2	PF14532.1	gi|479326209|ref|YP_007866264.1|	-	1.1e-05	25.5	0.0	0.14	12.1	0.0	2.5	2	0	0	2	2	2	2	Sigma-54	interaction	domain
NACHT	PF05729.7	gi|479326209|ref|YP_007866264.1|	-	1.1e-05	25.1	0.4	0.25	10.9	0.0	3.2	4	0	0	4	4	3	2	NACHT	domain
AAA_24	PF13479.1	gi|479326209|ref|YP_007866264.1|	-	1.4e-05	24.7	1.7	0.052	13.1	0.1	2.5	2	0	0	2	2	2	2	AAA	domain
Parvo_NS1	PF01057.12	gi|479326209|ref|YP_007866264.1|	-	3.2e-05	22.9	0.7	0.12	11.2	0.0	2.9	3	0	0	3	3	3	2	Parvovirus	non-structural	protein	NS1
DUF815	PF05673.8	gi|479326209|ref|YP_007866264.1|	-	7.8e-05	21.7	0.0	0.11	11.3	0.0	2.8	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
Bac_DnaA	PF00308.13	gi|479326209|ref|YP_007866264.1|	-	0.00016	21.4	0.0	0.038	13.6	0.0	3.0	2	2	0	2	2	2	1	Bacterial	dnaA	protein
NB-ARC	PF00931.17	gi|479326209|ref|YP_007866264.1|	-	0.00018	20.4	0.0	0.097	11.5	0.0	2.4	2	0	0	2	2	2	1	NB-ARC	domain
KaiC	PF06745.8	gi|479326209|ref|YP_007866264.1|	-	0.00033	19.8	3.8	0.22	10.6	0.0	4.0	4	1	1	5	5	4	1	KaiC
PhoH	PF02562.11	gi|479326209|ref|YP_007866264.1|	-	0.00058	19.1	0.2	0.19	10.9	0.0	2.6	2	0	0	2	2	2	1	PhoH-like	protein
UPF0079	PF02367.12	gi|479326209|ref|YP_007866264.1|	-	0.00095	18.7	0.0	1.9	8.1	0.0	2.5	2	0	0	2	2	2	2	Uncharacterised	P-loop	hydrolase	UPF0079
NTPase_1	PF03266.10	gi|479326209|ref|YP_007866264.1|	-	0.0012	18.5	4.5	2.8	7.6	0.0	4.6	3	2	1	4	4	4	0	NTPase
AAA_10	PF12846.2	gi|479326209|ref|YP_007866264.1|	-	0.0013	18.2	0.3	1.5	8.1	0.0	3.1	2	2	0	3	3	3	1	AAA-like	domain
ATP-synt_ab	PF00006.20	gi|479326209|ref|YP_007866264.1|	-	0.0014	18.1	0.0	0.44	10.0	0.0	2.6	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AFG1_ATPase	PF03969.11	gi|479326209|ref|YP_007866264.1|	-	0.0019	17.0	0.0	0.96	8.1	0.0	2.5	2	0	0	2	2	2	1	AFG1-like	ATPase
Vps4_C	PF09336.5	gi|479326209|ref|YP_007866264.1|	-	0.0019	18.0	0.8	0.055	13.3	0.1	3.0	2	0	0	2	2	2	1	Vps4	C	terminal	oligomerisation	domain
AAA_11	PF13086.1	gi|479326209|ref|YP_007866264.1|	-	0.0072	15.9	0.1	1.5	8.3	0.1	2.6	2	1	0	2	2	2	1	AAA	domain
SKI	PF01202.17	gi|479326209|ref|YP_007866264.1|	-	0.0076	16.1	0.0	5.7	6.7	0.0	2.6	2	0	0	2	2	2	0	Shikimate	kinase
Guanylate_kin	PF00625.16	gi|479326209|ref|YP_007866264.1|	-	0.0078	15.6	0.1	12	5.3	0.0	3.7	3	1	1	4	4	3	0	Guanylate	kinase
Viral_helicase1	PF01443.13	gi|479326209|ref|YP_007866264.1|	-	0.017	14.6	0.0	1.4	8.3	0.0	2.4	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
DUF2075	PF09848.4	gi|479326209|ref|YP_007866264.1|	-	0.022	13.7	0.0	4.4	6.1	0.0	2.4	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_23	PF13476.1	gi|479326209|ref|YP_007866264.1|	-	0.022	15.0	0.1	10	6.4	0.0	2.8	2	0	0	2	2	2	0	AAA	domain
ResIII	PF04851.10	gi|479326209|ref|YP_007866264.1|	-	0.023	14.5	0.0	2.5	7.8	0.0	2.5	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
IPT	PF01745.11	gi|479326209|ref|YP_007866264.1|	-	0.026	13.6	0.1	1.1	8.3	0.0	2.3	2	0	0	2	2	2	0	Isopentenyl	transferase
PduV-EutP	PF10662.4	gi|479326209|ref|YP_007866264.1|	-	0.027	13.9	0.0	8.4	5.8	0.0	2.5	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
UFD1	PF03152.9	gi|479326209|ref|YP_007866264.1|	-	0.032	13.3	0.0	0.066	12.3	0.0	1.5	1	0	0	1	1	1	0	Ubiquitin	fusion	degradation	protein	UFD1
T2SE	PF00437.15	gi|479326209|ref|YP_007866264.1|	-	0.036	12.9	0.0	5.5	5.7	0.0	2.4	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
KTI12	PF08433.5	gi|479326209|ref|YP_007866264.1|	-	0.037	13.2	0.0	8.2	5.5	0.0	2.6	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
AAA_29	PF13555.1	gi|479326209|ref|YP_007866264.1|	-	0.05	13.1	0.0	11	5.6	0.0	2.4	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
SPT16	PF08644.6	gi|479326209|ref|YP_007866264.1|	-	0.056	13.2	2.6	0.54	10.1	0.1	2.4	2	0	0	2	2	2	0	FACT	complex	subunit	(SPT16/CDC68)
KAP_NTPase	PF07693.9	gi|479326209|ref|YP_007866264.1|	-	0.058	12.3	0.0	26	3.6	0.0	3.1	2	1	0	3	3	3	0	KAP	family	P-loop	domain
vWF_A	PF12450.3	gi|479326209|ref|YP_007866264.1|	-	0.065	12.9	0.0	8	6.2	0.0	2.4	2	0	0	2	2	2	0	von	Willebrand	factor
MMR_HSR1	PF01926.18	gi|479326209|ref|YP_007866264.1|	-	0.065	13.1	0.0	5.8	6.9	0.0	3.1	2	1	1	3	3	2	0	50S	ribosome-binding	GTPase
AAA_30	PF13604.1	gi|479326209|ref|YP_007866264.1|	-	0.14	11.7	0.1	7.7	6.0	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
EF1_GNE	PF00736.14	gi|479326210|ref|YP_007866265.1|	-	9.2e-22	76.5	0.1	9.9e-22	76.4	0.1	1.0	1	0	0	1	1	1	1	EF-1	guanine	nucleotide	exchange	domain
DUF1610	PF07754.6	gi|479326211|ref|YP_007866266.1|	-	2.5e-21	75.4	12.2	1.1e-11	44.5	4.1	2.1	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF1610)
OrfB_Zn_ribbon	PF07282.6	gi|479326211|ref|YP_007866266.1|	-	7.1e-07	28.8	4.8	2.5e-05	23.8	0.7	2.1	1	1	1	2	2	2	1	Putative	transposase	DNA-binding	domain
zf-ribbon_3	PF13248.1	gi|479326211|ref|YP_007866266.1|	-	1.7e-06	27.0	11.3	0.00092	18.3	2.9	3.0	2	1	1	3	3	3	3	zinc-ribbon	domain
DZR	PF12773.2	gi|479326211|ref|YP_007866266.1|	-	1.1e-05	25.1	6.9	0.00013	21.7	1.2	2.3	1	1	0	1	1	1	1	Double	zinc	ribbon
TF_Zn_Ribbon	PF08271.7	gi|479326211|ref|YP_007866266.1|	-	3.3e-05	23.1	11.7	0.015	14.5	3.2	3.1	1	1	1	2	2	2	2	TFIIB	zinc-binding
zf-C2HC5	PF06221.8	gi|479326211|ref|YP_007866266.1|	-	0.0011	18.6	8.2	0.0019	17.9	1.0	2.1	1	1	1	2	2	2	1	Putative	zinc	finger	motif,	C2HC5-type
zinc_ribbon_2	PF13240.1	gi|479326211|ref|YP_007866266.1|	-	0.0017	17.7	14.2	0.65	9.5	0.4	3.2	2	1	1	3	3	3	2	zinc-ribbon	domain
DUF35_N	PF12172.3	gi|479326211|ref|YP_007866266.1|	-	0.0019	18.0	5.0	0.17	11.8	1.1	3.1	2	1	0	2	2	2	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zinc_ribbon_4	PF13717.1	gi|479326211|ref|YP_007866266.1|	-	0.0023	17.5	6.4	0.49	10.1	0.0	3.2	3	0	0	3	3	3	1	zinc-ribbon	domain
DUF2296	PF10058.4	gi|479326211|ref|YP_007866266.1|	-	0.0032	17.1	10.5	0.43	10.3	0.5	3.0	2	1	0	2	2	2	2	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
zinc_ribbon_5	PF13719.1	gi|479326211|ref|YP_007866266.1|	-	0.0049	16.4	7.3	0.49	10.0	0.0	3.2	3	0	0	3	3	3	1	zinc-ribbon	domain
ADK_lid	PF05191.9	gi|479326211|ref|YP_007866266.1|	-	0.0064	16.1	8.6	0.96	9.1	3.1	3.1	2	1	0	2	2	2	1	Adenylate	kinase,	active	site	lid
zf-DHHC	PF01529.15	gi|479326211|ref|YP_007866266.1|	-	0.01	15.2	1.1	0.013	14.8	0.7	1.2	1	0	0	1	1	1	0	DHHC	palmitoyltransferase
zf-B_box	PF00643.19	gi|479326211|ref|YP_007866266.1|	-	0.011	15.6	6.6	0.093	12.6	0.9	2.7	2	1	0	2	2	2	0	B-box	zinc	finger
HypA	PF01155.14	gi|479326211|ref|YP_007866266.1|	-	0.012	15.2	4.0	0.016	14.8	0.2	2.0	1	1	1	2	2	2	0	Hydrogenase	expression/synthesis	hypA	family
DUF1272	PF06906.6	gi|479326211|ref|YP_007866266.1|	-	0.014	15.1	7.3	0.79	9.6	0.3	2.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1272)
Rubredoxin	PF00301.15	gi|479326211|ref|YP_007866266.1|	-	0.019	14.8	6.0	4.6	7.1	0.1	3.1	2	1	0	2	2	2	0	Rubredoxin
zf-NADH-PPase	PF09297.6	gi|479326211|ref|YP_007866266.1|	-	0.023	14.2	6.4	0.041	13.3	0.7	2.4	2	1	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
TerY-C	PF15616.1	gi|479326211|ref|YP_007866266.1|	-	0.027	14.4	5.8	0.25	11.2	0.4	2.1	1	1	1	2	2	2	0	TerY-C	metal	binding	domain
Auto_anti-p27	PF06677.7	gi|479326211|ref|YP_007866266.1|	-	0.027	14.2	10.6	0.087	12.5	1.9	2.4	1	1	1	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
Nudix_N_2	PF14803.1	gi|479326211|ref|YP_007866266.1|	-	0.031	13.9	9.7	7.2	6.3	0.1	3.3	2	1	0	2	2	2	0	Nudix	N-terminal
NinF	PF05810.7	gi|479326211|ref|YP_007866266.1|	-	0.031	14.0	0.3	0.031	14.0	0.2	1.9	1	1	1	2	2	2	0	NinF	protein
IBR	PF01485.16	gi|479326211|ref|YP_007866266.1|	-	0.038	13.8	6.9	0.63	9.9	4.8	2.0	1	1	0	1	1	1	0	IBR	domain
Acetone_carb_G	PF08882.6	gi|479326211|ref|YP_007866266.1|	-	0.054	13.5	6.9	0.95	9.5	0.9	2.4	1	1	0	2	2	2	0	Acetone	carboxylase	gamma	subunit
zf-ISL3	PF14690.1	gi|479326211|ref|YP_007866266.1|	-	0.062	13.3	12.8	0.25	11.3	0.5	3.2	2	1	1	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-LITAF-like	PF10601.4	gi|479326211|ref|YP_007866266.1|	-	0.062	13.1	6.5	0.9	9.4	0.8	3.0	1	1	1	2	2	2	0	LITAF-like	zinc	ribbon	domain
UPF0547	PF10571.4	gi|479326211|ref|YP_007866266.1|	-	0.067	12.9	14.0	0.53	10.0	6.3	3.2	2	1	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
PolC_DP2	PF03833.8	gi|479326211|ref|YP_007866266.1|	-	0.073	10.7	2.3	0.082	10.5	1.6	1.1	1	0	0	1	1	1	0	DNA	polymerase	II	large	subunit	DP2
Sgf11	PF08209.6	gi|479326211|ref|YP_007866266.1|	-	0.078	12.3	8.5	1.6	8.0	0.1	3.2	3	0	0	3	3	3	0	Sgf11	(transcriptional	regulation	protein)
RRN7	PF11781.3	gi|479326211|ref|YP_007866266.1|	-	0.085	12.3	6.6	1.5	8.4	0.2	3.1	3	0	0	3	3	3	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
DUF164	PF02591.10	gi|479326211|ref|YP_007866266.1|	-	0.11	12.3	7.7	8.4	6.3	0.1	3.1	3	0	0	3	3	3	0	Putative	zinc	ribbon	domain
zf-HIT	PF04438.11	gi|479326211|ref|YP_007866266.1|	-	0.11	12.1	8.1	1.1	8.9	0.6	3.1	3	0	0	3	3	3	0	HIT	zinc	finger
Zn_ribbon_recom	PF13408.1	gi|479326211|ref|YP_007866266.1|	-	0.14	12.4	6.9	0.13	12.4	2.1	2.1	2	0	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
zf-CHY	PF05495.7	gi|479326211|ref|YP_007866266.1|	-	0.16	12.1	4.7	0.33	11.1	0.9	2.0	1	1	1	2	2	2	0	CHY	zinc	finger
zf-C3HC4_4	PF15227.1	gi|479326211|ref|YP_007866266.1|	-	0.17	11.7	5.9	0.66	9.8	0.6	2.2	2	0	0	2	2	2	0	zinc	finger	of	C3HC4-type,	RING
PHD	PF00628.24	gi|479326211|ref|YP_007866266.1|	-	0.18	11.5	8.7	4.7	6.9	0.3	2.9	1	1	1	2	2	2	0	PHD-finger
CK_II_beta	PF01214.13	gi|479326211|ref|YP_007866266.1|	-	0.19	11.1	3.9	0.11	11.9	0.5	1.8	1	1	1	2	2	2	0	Casein	kinase	II	regulatory	subunit
zf-C2H2	PF00096.21	gi|479326211|ref|YP_007866266.1|	-	0.19	12.1	10.0	1.5	9.3	0.3	3.2	3	0	0	3	3	3	0	Zinc	finger,	C2H2	type
NOB1_Zn_bind	PF08772.6	gi|479326211|ref|YP_007866266.1|	-	0.23	11.3	7.2	0.077	12.8	0.7	2.2	1	1	1	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
PhnA_Zn_Ribbon	PF08274.7	gi|479326211|ref|YP_007866266.1|	-	0.24	11.2	7.5	4	7.2	0.1	3.1	3	0	0	3	3	3	0	PhnA	Zinc-Ribbon
zf-C4_Topoisom	PF01396.14	gi|479326211|ref|YP_007866266.1|	-	0.25	10.8	8.6	1.5	8.3	0.2	3.2	2	1	1	3	3	3	0	Topoisomerase	DNA	binding	C4	zinc	finger
C1_1	PF00130.17	gi|479326211|ref|YP_007866266.1|	-	0.26	11.0	5.2	0.13	11.9	1.3	1.9	1	1	1	2	2	2	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
Spt4	PF06093.8	gi|479326211|ref|YP_007866266.1|	-	0.31	10.9	4.6	0.41	10.5	0.4	2.1	1	1	1	2	2	2	0	Spt4/RpoE2	zinc	finger
Ribosomal_L32p	PF01783.18	gi|479326211|ref|YP_007866266.1|	-	0.32	11.1	7.7	4.4	7.5	2.3	3.0	1	1	1	2	2	2	0	Ribosomal	L32p	protein	family
Zn-ribbon_8	PF09723.5	gi|479326211|ref|YP_007866266.1|	-	0.39	10.6	11.2	2.7	8.0	3.6	2.8	1	1	2	3	3	3	0	Zinc	ribbon	domain
zf-Mss51	PF13824.1	gi|479326211|ref|YP_007866266.1|	-	0.44	10.4	8.9	10	6.0	3.3	2.7	1	1	1	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
LIM	PF00412.17	gi|479326211|ref|YP_007866266.1|	-	0.49	10.5	4.8	16	5.6	3.3	2.1	1	1	0	1	1	1	0	LIM	domain
zf-MYND	PF01753.13	gi|479326211|ref|YP_007866266.1|	-	0.56	10.1	5.5	0.72	9.7	0.4	2.1	2	0	0	2	2	2	0	MYND	finger
zf-H2C2_2	PF13465.1	gi|479326211|ref|YP_007866266.1|	-	0.64	10.4	10.5	1.5	9.2	0.7	3.1	2	1	1	3	3	3	0	Zinc-finger	double	domain
zf-RING_3	PF14369.1	gi|479326211|ref|YP_007866266.1|	-	0.69	9.9	12.9	4.5	7.3	2.0	3.4	2	2	1	3	3	3	0	zinc-finger
Prok-RING_1	PF14446.1	gi|479326211|ref|YP_007866266.1|	-	0.79	9.5	6.3	0.37	10.5	0.4	2.3	1	1	1	2	2	2	0	Prokaryotic	RING	finger	family	1
zf-AN1	PF01428.11	gi|479326211|ref|YP_007866266.1|	-	1.1	9.1	9.3	15	5.5	2.9	3.1	1	1	2	3	3	3	0	AN1-like	Zinc	finger
YhfH	PF14149.1	gi|479326211|ref|YP_007866266.1|	-	1.2	8.9	8.3	8.3	6.2	0.3	3.2	2	1	1	3	3	3	0	YhfH-like	protein
XPA_N	PF01286.13	gi|479326211|ref|YP_007866266.1|	-	1.6	8.4	0.0	1.6	8.4	0.0	2.8	4	0	0	4	4	3	0	XPA	protein	N-terminal
zf-C2H2_4	PF13894.1	gi|479326211|ref|YP_007866266.1|	-	1.7	9.1	10.8	4.7	7.7	0.3	3.2	3	0	0	3	3	3	0	C2H2-type	zinc	finger
zinc-ribbons_6	PF07191.7	gi|479326211|ref|YP_007866266.1|	-	1.8	8.3	5.9	28	4.5	4.2	2.3	1	1	0	1	1	1	0	zinc-ribbons
Zn_Tnp_IS1595	PF12760.2	gi|479326211|ref|YP_007866266.1|	-	2.1	8.2	14.4	7.3	6.4	1.2	3.2	1	1	2	3	3	3	0	Transposase	zinc-ribbon	domain
zf-RING_5	PF14634.1	gi|479326211|ref|YP_007866266.1|	-	2.4	7.9	8.3	4.2	7.1	1.1	1.9	1	1	1	2	2	2	0	zinc-RING	finger	domain
zf-dskA_traR	PF01258.12	gi|479326211|ref|YP_007866266.1|	-	2.7	7.7	9.5	2.9	7.7	0.2	3.2	3	0	0	3	3	3	0	Prokaryotic	dksA/traR	C4-type	zinc	finger
zf-RING_4	PF14570.1	gi|479326211|ref|YP_007866266.1|	-	3.1	7.4	7.6	3.3	7.3	1.0	2.3	2	0	0	2	2	2	0	RING/Ubox	like	zinc-binding	domain
RNHCP	PF12647.2	gi|479326211|ref|YP_007866266.1|	-	3.4	7.5	6.6	1.4	8.7	1.6	2.0	1	1	1	2	2	2	0	RNHCP	domain
C1_3	PF07649.7	gi|479326211|ref|YP_007866266.1|	-	3.7	7.6	10.1	5	7.2	0.5	2.6	2	1	0	2	2	2	0	C1-like	domain
TFIIS_C	PF01096.13	gi|479326211|ref|YP_007866266.1|	-	3.9	7.1	8.2	21	4.8	0.6	3.2	3	0	0	3	3	3	0	Transcription	factor	S-II	(TFIIS)
zf-C3HC4_3	PF13920.1	gi|479326211|ref|YP_007866266.1|	-	4.8	6.9	7.7	71	3.1	5.3	2.3	1	1	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
Elf1	PF05129.8	gi|479326211|ref|YP_007866266.1|	-	4.9	6.9	6.2	2.1	8.0	1.6	2.0	1	1	1	2	2	2	0	Transcription	elongation	factor	Elf1	like
NMD3	PF04981.8	gi|479326211|ref|YP_007866266.1|	-	5.5	6.0	7.0	11	5.0	0.0	2.0	1	1	0	2	2	2	0	NMD3	family
zf-FPG_IleRS	PF06827.9	gi|479326211|ref|YP_007866266.1|	-	5.9	6.6	11.3	5	6.8	1.5	2.9	1	1	2	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
RNA_POL_M_15KD	PF02150.11	gi|479326211|ref|YP_007866266.1|	-	6.4	6.5	8.4	13	5.5	1.2	2.8	1	1	2	3	3	3	0	RNA	polymerases	M/15	Kd	subunit
Ogr_Delta	PF04606.7	gi|479326211|ref|YP_007866266.1|	-	6.9	6.4	9.2	4.9	6.8	0.2	2.9	3	0	0	3	3	3	0	Ogr/Delta-like	zinc	finger
FYVE	PF01363.16	gi|479326211|ref|YP_007866266.1|	-	7.9	6.4	8.4	88	3.1	5.8	2.2	1	1	0	1	1	1	0	FYVE	zinc	finger
DUF2072	PF09845.4	gi|479326211|ref|YP_007866266.1|	-	9.1	6.2	8.1	1.2	9.0	0.9	2.1	1	1	0	2	2	2	0	Zn-ribbon	containing	protein	(DUF2072)
PTH2	PF01981.11	gi|479326212|ref|YP_007866267.1|	-	2.9e-45	152.6	0.1	3.3e-45	152.5	0.0	1.0	1	0	0	1	1	1	1	Peptidyl-tRNA	hydrolase	PTH2
TruD	PF01142.13	gi|479326213|ref|YP_007866268.1|	-	1.8e-43	148.7	0.2	7.4e-34	117.0	0.1	2.1	2	0	0	2	2	2	2	tRNA	pseudouridine	synthase	D	(TruD)
tRNA-synt_2	PF00152.15	gi|479326214|ref|YP_007866269.1|	-	4.9e-93	311.5	0.1	6.8e-93	311.0	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.20	gi|479326214|ref|YP_007866269.1|	-	2.3e-13	49.7	0.3	5.5e-13	48.5	0.2	1.7	2	0	0	2	2	2	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.15	gi|479326214|ref|YP_007866269.1|	-	0.029	13.5	0.2	2.8	7.0	0.0	2.5	3	0	0	3	3	3	0	tRNA	synthetases	class	II	core	domain	(F)
KH_5	PF13184.1	gi|479326215|ref|YP_007866270.1|	-	7.4e-11	41.6	0.1	1.2e-10	40.9	0.1	1.4	1	0	0	1	1	1	1	NusA-like	KH	domain
Ribosomal_L40e	PF01020.12	gi|479326216|ref|YP_007866271.1|	-	1.9e-08	33.7	5.0	2.2e-08	33.5	3.5	1.2	1	0	0	1	1	1	1	Ribosomal	L40e	family
DUF35_N	PF12172.3	gi|479326216|ref|YP_007866271.1|	-	0.0015	18.3	0.5	0.002	17.9	0.3	1.2	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
HypA	PF01155.14	gi|479326216|ref|YP_007866271.1|	-	0.0037	16.9	0.3	0.0043	16.7	0.2	1.0	1	0	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
zf-ribbon_3	PF13248.1	gi|479326216|ref|YP_007866271.1|	-	0.0049	16.0	0.6	0.0066	15.6	0.4	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|479326216|ref|YP_007866271.1|	-	0.0051	16.2	1.0	0.0071	15.7	0.7	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|479326216|ref|YP_007866271.1|	-	0.0068	16.1	0.9	0.0084	15.9	0.6	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-RanBP	PF00641.13	gi|479326216|ref|YP_007866271.1|	-	0.016	14.2	3.1	0.022	13.8	2.2	1.2	1	0	0	1	1	1	0	Zn-finger	in	Ran	binding	protein	and	others
zf-DHHC	PF01529.15	gi|479326216|ref|YP_007866271.1|	-	0.024	14.0	1.6	0.024	14.0	1.1	1.1	1	0	0	1	1	1	0	DHHC	palmitoyltransferase
DnaJ_CXXCXGXG	PF00684.14	gi|479326216|ref|YP_007866271.1|	-	0.035	14.1	0.8	0.042	13.9	0.5	1.1	1	0	0	1	1	1	0	DnaJ	central	domain
zf-C2H2_3	PF13878.1	gi|479326216|ref|YP_007866271.1|	-	0.049	13.2	2.6	0.3	10.6	0.1	2.1	2	0	0	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
Paired_CXXCH_1	PF09699.5	gi|479326216|ref|YP_007866271.1|	-	0.078	12.5	1.6	0.096	12.2	0.1	1.8	2	0	0	2	2	2	0	Doubled	CXXCH	motif	(Paired_CXXCH_1)
zf-IS66	PF13005.2	gi|479326216|ref|YP_007866271.1|	-	0.1	12.5	2.1	0.42	10.6	0.1	2.0	2	0	0	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
Spt4	PF06093.8	gi|479326216|ref|YP_007866271.1|	-	0.21	11.4	1.3	0.23	11.3	0.9	1.2	1	0	0	1	1	1	0	Spt4/RpoE2	zinc	finger
zf-tcix	PF14952.1	gi|479326216|ref|YP_007866271.1|	-	0.37	10.1	8.3	1.1	8.5	5.8	1.7	1	1	0	1	1	1	0	Putative	treble-clef,	zinc-finger,	Zn-binding
Cytochrome_C7	PF14522.1	gi|479326216|ref|YP_007866271.1|	-	0.51	10.0	3.6	2.3	7.9	2.5	1.9	1	1	0	1	1	1	0	Cytochrome	c7
Haem_bd	PF14376.1	gi|479326216|ref|YP_007866271.1|	-	0.53	9.9	2.9	1.8	8.2	2.1	1.7	1	1	1	2	2	2	0	Haem-binding	domain
RNA_POL_M_15KD	PF02150.11	gi|479326216|ref|YP_007866271.1|	-	0.56	9.9	3.6	1.1	9.0	0.0	2.1	1	1	1	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
DNA_RNApol_7kD	PF03604.8	gi|479326216|ref|YP_007866271.1|	-	0.96	8.9	7.7	0.29	10.6	2.5	2.2	2	1	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Zn-ribbon_8	PF09723.5	gi|479326216|ref|YP_007866271.1|	-	1.1	9.2	4.0	7.3	6.6	2.7	2.0	1	1	1	2	2	2	0	Zinc	ribbon	domain
Mu-like_Com	PF10122.4	gi|479326216|ref|YP_007866271.1|	-	1.2	8.2	9.0	0.21	10.6	0.3	2.1	1	1	1	2	2	2	0	Mu-like	prophage	protein	Com
DUF2204	PF09970.4	gi|479326217|ref|YP_007866272.1|	-	2.2e-67	226.0	2.4	2.5e-67	225.8	1.7	1.0	1	0	0	1	1	1	1	Nucleotidyl	transferase	of	unknown	function	(DUF2204)
TPP_enzyme_M	PF00205.17	gi|479326218|ref|YP_007866273.1|	-	1.1e-34	119.0	0.2	6.9e-34	116.5	0.0	2.3	3	0	0	3	3	3	1	Thiamine	pyrophosphate	enzyme,	central	domain
TPP_enzyme_N	PF02776.13	gi|479326218|ref|YP_007866273.1|	-	1.1e-22	80.3	0.0	1.7e-22	79.6	0.0	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
PNTB	PF02233.11	gi|479326218|ref|YP_007866273.1|	-	0.0039	16.0	0.0	0.0068	15.2	0.0	1.3	1	0	0	1	1	1	1	NAD(P)	transhydrogenase	beta	subunit
DUF4133	PF13571.1	gi|479326219|ref|YP_007866274.1|	-	0.054	13.7	0.6	0.054	13.7	0.4	2.1	2	2	0	2	2	2	0	Domain	of	unknown	function	(DUF4133)
ABC_tran	PF00005.22	gi|479326221|ref|YP_007866276.1|	-	5.3e-33	114.2	0.1	2.5e-17	63.4	0.0	3.2	2	1	1	3	3	3	3	ABC	transporter
AAA_21	PF13304.1	gi|479326221|ref|YP_007866276.1|	-	2.6e-17	63.7	17.2	2.4e-05	24.4	0.0	4.7	2	2	2	5	5	5	4	AAA	domain
AAA_29	PF13555.1	gi|479326221|ref|YP_007866276.1|	-	8.4e-09	34.8	0.1	0.0029	17.0	0.1	2.5	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
cobW	PF02492.14	gi|479326221|ref|YP_007866276.1|	-	8.5e-07	28.5	0.1	0.0094	15.4	0.0	2.3	2	0	0	2	2	2	2	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_16	PF13191.1	gi|479326221|ref|YP_007866276.1|	-	1.7e-06	28.1	0.0	0.007	16.3	0.0	2.5	2	0	0	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|479326221|ref|YP_007866276.1|	-	3.7e-06	26.3	4.9	0.44	9.7	0.9	4.1	3	1	0	3	3	3	2	RecF/RecN/SMC	N	terminal	domain
Pox_A32	PF04665.7	gi|479326221|ref|YP_007866276.1|	-	5.4e-06	25.8	0.1	0.024	13.9	0.1	2.6	2	0	0	2	2	2	2	Poxvirus	A32	protein
NB-ARC	PF00931.17	gi|479326221|ref|YP_007866276.1|	-	6.2e-06	25.2	0.1	0.032	13.0	0.0	2.3	2	0	0	2	2	2	2	NB-ARC	domain
MobB	PF03205.9	gi|479326221|ref|YP_007866276.1|	-	6.4e-06	25.9	0.1	0.03	14.0	0.0	2.5	2	0	0	2	2	2	2	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Miro	PF08477.8	gi|479326221|ref|YP_007866276.1|	-	7e-06	26.5	0.1	0.11	13.0	0.0	2.5	2	0	0	2	2	2	2	Miro-like	protein
AAA	PF00004.24	gi|479326221|ref|YP_007866276.1|	-	1.1e-05	25.6	0.6	0.0047	17.1	0.0	2.7	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_14	PF13173.1	gi|479326221|ref|YP_007866276.1|	-	1.9e-05	24.5	1.1	0.029	14.2	0.0	3.2	2	1	1	3	3	3	1	AAA	domain
AAA_22	PF13401.1	gi|479326221|ref|YP_007866276.1|	-	3.2e-05	24.0	1.0	0.0091	16.1	0.0	2.8	2	1	0	2	2	2	1	AAA	domain
NACHT	PF05729.7	gi|479326221|ref|YP_007866276.1|	-	3.6e-05	23.4	3.4	0.012	15.3	0.0	2.7	3	1	0	3	3	2	2	NACHT	domain
DUF3584	PF12128.3	gi|479326221|ref|YP_007866276.1|	-	0.0002	18.9	0.9	0.01	13.2	0.1	2.1	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF3584)
SRP54	PF00448.17	gi|479326221|ref|YP_007866276.1|	-	0.00034	20.1	0.0	0.32	10.3	0.0	2.4	2	0	0	2	2	2	2	SRP54-type	protein,	GTPase	domain
AAA_33	PF13671.1	gi|479326221|ref|YP_007866276.1|	-	0.00051	19.9	0.2	1.2	8.9	0.0	2.7	2	1	0	2	2	2	2	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|479326221|ref|YP_007866276.1|	-	0.00052	19.5	0.1	0.11	11.9	0.0	2.5	3	0	0	3	3	2	1	FtsK/SpoIIIE	family
UPF0079	PF02367.12	gi|479326221|ref|YP_007866276.1|	-	0.00055	19.5	0.2	0.21	11.2	0.0	2.5	2	0	0	2	2	2	1	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_23	PF13476.1	gi|479326221|ref|YP_007866276.1|	-	0.00063	20.1	10.5	0.032	14.5	0.0	2.9	1	1	1	2	2	2	1	AAA	domain
MMR_HSR1	PF01926.18	gi|479326221|ref|YP_007866276.1|	-	0.00083	19.2	0.5	1.4	8.9	0.2	2.6	2	1	0	2	2	2	2	50S	ribosome-binding	GTPase
AAA_25	PF13481.1	gi|479326221|ref|YP_007866276.1|	-	0.00088	18.7	0.0	0.4	10.0	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
AAA_24	PF13479.1	gi|479326221|ref|YP_007866276.1|	-	0.00089	18.9	0.0	1.1	8.7	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
G-alpha	PF00503.15	gi|479326221|ref|YP_007866276.1|	-	0.0012	17.6	0.1	0.14	10.7	0.0	2.1	2	0	0	2	2	2	1	G-protein	alpha	subunit
AAA_15	PF13175.1	gi|479326221|ref|YP_007866276.1|	-	0.0015	17.7	13.9	0.26	10.2	3.3	3.9	2	1	1	4	4	4	2	AAA	ATPase	domain
NTPase_1	PF03266.10	gi|479326221|ref|YP_007866276.1|	-	0.0016	18.1	0.1	3.3	7.3	0.0	3.1	3	0	0	3	3	3	0	NTPase
Viral_helicase1	PF01443.13	gi|479326221|ref|YP_007866276.1|	-	0.0022	17.5	0.0	0.64	9.4	0.0	2.3	2	0	0	2	2	2	1	Viral	(Superfamily	1)	RNA	helicase
Arch_ATPase	PF01637.13	gi|479326221|ref|YP_007866276.1|	-	0.0027	17.4	2.1	0.19	11.3	0.0	2.7	3	0	0	3	3	2	1	Archaeal	ATPase
DUF258	PF03193.11	gi|479326221|ref|YP_007866276.1|	-	0.0035	16.5	0.1	0.8	8.8	0.0	2.4	2	0	0	2	2	2	1	Protein	of	unknown	function,	DUF258
AAA_18	PF13238.1	gi|479326221|ref|YP_007866276.1|	-	0.0036	17.6	3.0	0.35	11.1	0.0	3.0	2	1	0	2	2	2	1	AAA	domain
AAA_5	PF07728.9	gi|479326221|ref|YP_007866276.1|	-	0.0039	16.9	0.1	0.53	10.0	0.0	2.5	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
Arf	PF00025.16	gi|479326221|ref|YP_007866276.1|	-	0.0043	16.3	0.4	0.22	10.7	0.0	2.3	2	0	0	2	2	2	1	ADP-ribosylation	factor	family
T2SE	PF00437.15	gi|479326221|ref|YP_007866276.1|	-	0.0047	15.8	0.1	0.79	8.5	0.0	2.3	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
SbcCD_C	PF13558.1	gi|479326221|ref|YP_007866276.1|	-	0.0048	16.7	0.0	0.062	13.2	0.0	2.3	2	0	0	2	2	2	1	Putative	exonuclease	SbcCD,	C	subunit
ATP-synt_ab	PF00006.20	gi|479326221|ref|YP_007866276.1|	-	0.0053	16.2	0.0	0.27	10.6	0.0	2.2	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_17	PF13207.1	gi|479326221|ref|YP_007866276.1|	-	0.0054	17.5	4.1	0.72	10.6	0.0	3.1	3	1	0	3	3	2	1	AAA	domain
PduV-EutP	PF10662.4	gi|479326221|ref|YP_007866276.1|	-	0.0074	15.7	0.6	4.2	6.8	0.0	2.6	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
RNA_helicase	PF00910.17	gi|479326221|ref|YP_007866276.1|	-	0.0089	16.1	2.4	2.8	8.1	0.0	3.5	2	1	1	3	3	3	1	RNA	helicase
AAA_19	PF13245.1	gi|479326221|ref|YP_007866276.1|	-	0.01	15.5	0.0	3.2	7.5	0.0	2.4	2	0	0	2	2	2	0	Part	of	AAA	domain
AAA_10	PF12846.2	gi|479326221|ref|YP_007866276.1|	-	0.012	15.1	1.1	4.3	6.6	0.0	2.7	2	1	0	2	2	2	0	AAA-like	domain
Septin	PF00735.13	gi|479326221|ref|YP_007866276.1|	-	0.016	14.2	0.3	3.1	6.7	0.0	2.6	2	1	0	2	2	2	0	Septin
AAA_28	PF13521.1	gi|479326221|ref|YP_007866276.1|	-	0.016	15.1	0.2	0.71	9.8	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
Zeta_toxin	PF06414.7	gi|479326221|ref|YP_007866276.1|	-	0.018	14.1	0.0	6.9	5.7	0.0	2.6	3	0	0	3	3	2	0	Zeta	toxin
TrwB_AAD_bind	PF10412.4	gi|479326221|ref|YP_007866276.1|	-	0.029	12.9	0.0	0.69	8.4	0.0	2.2	2	0	0	2	2	2	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA_13	PF13166.1	gi|479326221|ref|YP_007866276.1|	-	0.034	12.6	4.1	1.9	6.8	0.0	2.7	3	1	0	3	3	3	0	AAA	domain
ATP_bind_1	PF03029.12	gi|479326221|ref|YP_007866276.1|	-	0.044	13.3	0.0	3.7	7.0	0.0	2.5	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
ResIII	PF04851.10	gi|479326221|ref|YP_007866276.1|	-	0.048	13.4	0.1	7.7	6.3	0.0	2.4	2	1	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
AAA_30	PF13604.1	gi|479326221|ref|YP_007866276.1|	-	0.071	12.6	0.3	4.8	6.7	0.0	2.6	2	1	0	2	2	2	0	AAA	domain
PhoH	PF02562.11	gi|479326221|ref|YP_007866276.1|	-	0.082	12.1	0.0	9.7	5.3	0.0	2.4	2	0	0	2	2	2	0	PhoH-like	protein
DAP3	PF10236.4	gi|479326221|ref|YP_007866276.1|	-	0.087	11.7	0.1	1.9	7.3	0.0	2.4	2	0	0	2	2	2	0	Mitochondrial	ribosomal	death-associated	protein	3
Transposase_20	PF02371.11	gi|479326222|ref|YP_007866277.1|	-	3.8e-23	81.3	0.0	7.4e-23	80.4	0.0	1.5	1	0	0	1	1	1	1	Transposase	IS116/IS110/IS902	family
DEDD_Tnp_IS110	PF01548.12	gi|479326222|ref|YP_007866277.1|	-	6.4e-11	42.1	0.0	1.6e-10	40.7	0.0	1.7	1	0	0	1	1	1	1	Transposase
Epimerase	PF01370.16	gi|479326223|ref|YP_007866278.1|	-	2.2e-43	148.3	0.1	3e-43	147.9	0.1	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|479326223|ref|YP_007866278.1|	-	5.7e-14	51.6	0.0	6.6e-14	51.4	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
3Beta_HSD	PF01073.14	gi|479326223|ref|YP_007866278.1|	-	3.5e-12	45.6	0.3	4.5e-12	45.2	0.2	1.1	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
NAD_binding_4	PF07993.7	gi|479326223|ref|YP_007866278.1|	-	4e-09	35.7	0.2	4.8e-06	25.6	0.0	2.2	2	0	0	2	2	2	2	Male	sterility	protein
Polysacc_synt_2	PF02719.10	gi|479326223|ref|YP_007866278.1|	-	5e-09	35.4	1.6	5.8e-08	31.9	1.1	2.5	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_10	PF13460.1	gi|479326223|ref|YP_007866278.1|	-	8.9e-05	22.5	0.0	0.00082	19.4	0.0	2.0	2	0	0	2	2	2	1	NADH(P)-binding
adh_short	PF00106.20	gi|479326223|ref|YP_007866278.1|	-	0.0017	18.3	0.5	0.011	15.6	0.3	2.0	1	1	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|479326223|ref|YP_007866278.1|	-	0.018	14.7	0.0	0.059	13.0	0.0	1.8	2	0	0	2	2	2	0	KR	domain
DsrD	PF08679.6	gi|479326223|ref|YP_007866278.1|	-	0.039	13.9	0.5	0.45	10.5	0.0	2.9	3	0	0	3	3	3	0	Dissimilatory	sulfite	reductase	D	(DsrD)
NmrA	PF05368.8	gi|479326223|ref|YP_007866278.1|	-	0.044	13.0	0.0	0.081	12.1	0.0	1.4	1	0	0	1	1	1	0	NmrA-like	family
Epimerase_Csub	PF13950.1	gi|479326223|ref|YP_007866278.1|	-	0.12	12.3	0.0	0.29	11.0	0.0	1.6	1	0	0	1	1	1	0	UDP-glucose	4-epimerase	C-term	subunit
Bacteriocin_IIi	PF11758.3	gi|479326223|ref|YP_007866278.1|	-	0.17	11.4	1.6	1.6	8.4	0.2	2.5	2	0	0	2	2	2	0	Aureocin-like	type	II	bacteriocin
UDPG_MGDP_dh_N	PF03721.9	gi|479326223|ref|YP_007866278.1|	-	0.42	9.9	3.4	3.7	6.8	2.3	2.1	1	1	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
SRP19	PF01922.12	gi|479326224|ref|YP_007866279.1|	-	1.8e-07	31.6	0.3	3.3e-07	30.7	0.2	1.4	1	1	0	1	1	1	1	SRP19	protein
Ribosomal_S8e	PF01201.17	gi|479326225|ref|YP_007866280.1|	-	1.8e-33	115.5	0.5	1.9e-33	115.3	0.4	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S8e
Prenyltransf	PF01255.14	gi|479326226|ref|YP_007866281.1|	-	4.4e-75	251.6	0.5	5.1e-75	251.4	0.4	1.0	1	0	0	1	1	1	1	Putative	undecaprenyl	diphosphate	synthase
Phage_int_SAM_5	PF13102.1	gi|479326226|ref|YP_007866281.1|	-	0.033	14.1	0.3	0.056	13.4	0.2	1.5	1	0	0	1	1	1	0	Phage	integrase	SAM-like	domain
Peptidase_M20	PF01546.23	gi|479326227|ref|YP_007866282.1|	-	2.8e-22	79.1	0.0	3.4e-22	78.8	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|479326227|ref|YP_007866282.1|	-	1.8e-07	30.9	0.0	3.5e-07	29.9	0.0	1.5	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Peptidase_M28	PF04389.12	gi|479326227|ref|YP_007866282.1|	-	0.0055	16.4	0.0	0.0078	15.9	0.0	1.6	1	1	0	1	1	1	1	Peptidase	family	M28
Aminotran_3	PF00202.16	gi|479326228|ref|YP_007866283.1|	-	2.1e-102	342.4	0.0	2.6e-102	342.1	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-III
Aminotran_1_2	PF00155.16	gi|479326228|ref|YP_007866283.1|	-	6.8e-05	21.9	0.0	0.00015	20.8	0.0	1.6	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
RimK	PF08443.6	gi|479326229|ref|YP_007866284.1|	-	3.8e-46	156.9	0.0	6e-46	156.3	0.0	1.3	1	0	0	1	1	1	1	RimK-like	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|479326229|ref|YP_007866284.1|	-	9.5e-13	48.2	0.0	1.4e-12	47.7	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	domain
GSH-S_ATP	PF02955.11	gi|479326229|ref|YP_007866284.1|	-	2e-12	46.5	0.0	3e-12	46.0	0.0	1.3	1	0	0	1	1	1	1	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
ATP-grasp_3	PF02655.9	gi|479326229|ref|YP_007866284.1|	-	4.9e-07	29.7	0.0	7.8e-07	29.0	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
CPSase_L_D2	PF02786.12	gi|479326229|ref|YP_007866284.1|	-	2.9e-05	23.4	0.0	7e-05	22.2	0.0	1.6	2	0	0	2	2	2	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
ATPgrasp_Ter	PF15632.1	gi|479326229|ref|YP_007866284.1|	-	7.6e-05	21.6	0.0	0.00011	21.0	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp_5	PF13549.1	gi|479326229|ref|YP_007866284.1|	-	7.9e-05	21.9	0.0	0.00014	21.1	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
Dala_Dala_lig_C	PF07478.8	gi|479326229|ref|YP_007866284.1|	-	8.5e-05	22.0	0.0	0.0028	17.0	0.0	2.5	2	1	0	2	2	2	1	D-ala	D-ala	ligase	C-terminus
ATP-grasp	PF02222.17	gi|479326229|ref|YP_007866284.1|	-	0.0059	15.9	0.0	0.01	15.2	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
GARS_A	PF01071.14	gi|479326229|ref|YP_007866284.1|	-	0.029	13.9	0.0	0.044	13.3	0.0	1.4	1	0	0	1	1	1	0	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATP-grasp_2	PF08442.5	gi|479326229|ref|YP_007866284.1|	-	0.095	12.0	0.0	0.17	11.2	0.0	1.3	1	0	0	1	1	1	0	ATP-grasp	domain
TF_Zn_Ribbon	PF08271.7	gi|479326230|ref|YP_007866285.1|	-	0.0031	16.7	0.6	0.0049	16.1	0.4	1.3	1	1	0	1	1	1	1	TFIIB	zinc-binding
DNA_ligase_ZBD	PF03119.11	gi|479326230|ref|YP_007866285.1|	-	0.02	14.5	0.7	0.26	11.0	0.1	2.3	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Prok-RING_1	PF14446.1	gi|479326230|ref|YP_007866285.1|	-	0.026	14.2	0.3	0.045	13.4	0.2	1.4	1	1	0	1	1	1	0	Prokaryotic	RING	finger	family	1
Lar_restr_allev	PF14354.1	gi|479326230|ref|YP_007866285.1|	-	0.054	13.8	0.3	0.076	13.3	0.2	1.4	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
Rad50_zn_hook	PF04423.9	gi|479326230|ref|YP_007866285.1|	-	0.059	12.8	0.1	0.14	11.6	0.0	1.6	1	0	0	1	1	1	0	Rad50	zinc	hook	motif
zf-ribbon_3	PF13248.1	gi|479326230|ref|YP_007866285.1|	-	0.06	12.5	0.2	1.2	8.4	0.0	2.1	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|479326230|ref|YP_007866285.1|	-	0.068	12.6	1.4	3.4	7.2	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-C4_Topoisom	PF01396.14	gi|479326230|ref|YP_007866285.1|	-	0.25	10.8	1.3	1.2	8.6	0.2	2.0	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
zf-IS66	PF13005.2	gi|479326230|ref|YP_007866285.1|	-	0.27	11.2	2.5	2.3	8.2	1.1	2.4	1	1	1	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
AsnC_trans_reg	PF01037.16	gi|479326231|ref|YP_007866286.1|	-	3.4e-15	55.5	0.1	6.4e-15	54.6	0.1	1.5	1	0	0	1	1	1	1	AsnC	family
HTH_AsnC-type	PF13404.1	gi|479326231|ref|YP_007866286.1|	-	3.4e-12	45.6	0.1	8e-12	44.4	0.2	1.6	2	0	0	2	2	1	1	AsnC-type	helix-turn-helix	domain
HTH_24	PF13412.1	gi|479326231|ref|YP_007866286.1|	-	1.1e-11	43.8	3.6	1.6e-11	43.4	1.4	1.9	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|479326231|ref|YP_007866286.1|	-	3.6e-06	26.5	3.6	3.8e-06	26.4	0.7	2.2	3	0	0	3	3	3	1	HTH	domain
NapD	PF03927.8	gi|479326231|ref|YP_007866286.1|	-	1.5e-05	24.7	0.4	2.6e-05	23.9	0.3	1.4	1	0	0	1	1	1	1	NapD	protein
HTH_Mga	PF08280.6	gi|479326231|ref|YP_007866286.1|	-	0.00048	19.8	0.3	0.001	18.7	0.2	1.5	1	0	0	1	1	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
MarR	PF01047.17	gi|479326231|ref|YP_007866286.1|	-	0.00088	18.9	1.3	0.0013	18.3	0.1	1.9	3	0	0	3	3	2	1	MarR	family
HTH_DeoR	PF08220.7	gi|479326231|ref|YP_007866286.1|	-	0.0014	18.1	0.3	0.0022	17.4	0.2	1.3	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
DUF2250	PF10007.4	gi|479326231|ref|YP_007866286.1|	-	0.0014	18.4	0.2	0.0026	17.6	0.1	1.5	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
TrmB	PF01978.14	gi|479326231|ref|YP_007866286.1|	-	0.0018	17.9	0.3	0.0039	16.8	0.2	1.6	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_20	PF12840.2	gi|479326231|ref|YP_007866286.1|	-	0.0037	17.0	0.0	0.0061	16.3	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
FeoC	PF09012.5	gi|479326231|ref|YP_007866286.1|	-	0.0041	16.8	0.0	0.0063	16.2	0.0	1.3	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
PAX	PF00292.13	gi|479326231|ref|YP_007866286.1|	-	0.0076	15.9	0.4	0.1	12.3	0.3	2.2	1	1	0	1	1	1	1	'Paired	box'	domain
HTH_34	PF13601.1	gi|479326231|ref|YP_007866286.1|	-	0.0082	16.1	0.1	0.014	15.4	0.1	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|479326231|ref|YP_007866286.1|	-	0.0091	15.6	0.0	0.017	14.7	0.0	1.4	1	0	0	1	1	1	1	MarR	family
Cullin_Nedd8	PF10557.4	gi|479326231|ref|YP_007866286.1|	-	0.021	14.6	1.3	0.033	14.0	0.5	1.7	1	1	0	1	1	1	0	Cullin	protein	neddylation	domain
DUF4423	PF14394.1	gi|479326231|ref|YP_007866286.1|	-	0.024	14.1	0.3	0.041	13.4	0.2	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
Stk19	PF10494.4	gi|479326231|ref|YP_007866286.1|	-	0.047	13.0	0.1	0.057	12.8	0.1	1.2	1	0	0	1	1	1	0	Serine-threonine	protein	kinase	19
Rio2_N	PF09202.6	gi|479326231|ref|YP_007866286.1|	-	0.06	13.4	0.2	0.31	11.1	0.1	1.9	1	1	1	2	2	2	0	Rio2,	N-terminal
HTH_45	PF14947.1	gi|479326231|ref|YP_007866286.1|	-	0.061	13.1	0.4	0.14	12.0	0.3	1.5	1	0	0	1	1	1	0	Winged	helix-turn-helix
HTH_5	PF01022.15	gi|479326231|ref|YP_007866286.1|	-	0.069	12.8	0.1	0.12	12.0	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
NTase_sub_bind	PF08780.6	gi|479326231|ref|YP_007866286.1|	-	0.08	12.7	0.0	0.1	12.3	0.0	1.3	1	0	0	1	1	1	0	Nucleotidyltransferase	substrate	binding	protein	like
TFIIE_alpha	PF02002.12	gi|479326231|ref|YP_007866286.1|	-	0.097	12.1	0.4	0.17	11.3	0.3	1.4	1	0	0	1	1	1	0	TFIIE	alpha	subunit
Rrf2	PF02082.15	gi|479326231|ref|YP_007866286.1|	-	0.11	12.5	0.1	0.28	11.3	0.1	1.7	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_9	PF08221.6	gi|479326231|ref|YP_007866286.1|	-	0.12	12.2	0.1	0.29	11.0	0.0	1.6	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
HTH_12	PF08461.5	gi|479326231|ref|YP_007866286.1|	-	0.15	11.8	1.9	0.32	10.7	1.3	1.7	1	1	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
Transcrip_reg	PF01709.15	gi|479326231|ref|YP_007866286.1|	-	0.23	10.5	1.5	0.38	9.8	1.1	1.4	1	1	0	1	1	1	0	Transcriptional	regulator
AA_kinase	PF00696.23	gi|479326232|ref|YP_007866287.1|	-	1.9e-28	99.6	5.2	2.2e-28	99.4	3.6	1.0	1	0	0	1	1	1	1	Amino	acid	kinase	family
Semialdhyde_dh	PF01118.19	gi|479326233|ref|YP_007866288.1|	-	9.1e-35	119.5	0.0	4.6e-34	117.3	0.0	2.1	3	0	0	3	3	3	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Semialdhyde_dhC	PF02774.13	gi|479326233|ref|YP_007866288.1|	-	2.3e-08	34.1	0.0	3.2e-08	33.6	0.0	1.2	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
GFO_IDH_MocA	PF01408.17	gi|479326233|ref|YP_007866288.1|	-	0.099	13.1	0.0	0.2	12.2	0.0	1.5	1	0	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
AAA_10	PF12846.2	gi|479326235|ref|YP_007866290.1|	-	2.4e-25	89.6	0.9	9.1e-25	87.7	0.1	2.1	2	0	0	2	2	2	1	AAA-like	domain
DUF87	PF01935.12	gi|479326235|ref|YP_007866290.1|	-	2.8e-08	33.8	1.1	2.8e-08	33.8	0.8	3.3	2	2	0	2	2	2	1	Domain	of	unknown	function	DUF87
Zot	PF05707.7	gi|479326235|ref|YP_007866290.1|	-	3.4e-06	26.6	0.1	0.0069	15.8	0.0	2.7	3	0	0	3	3	3	2	Zonular	occludens	toxin	(Zot)
DUF853	PF05872.7	gi|479326235|ref|YP_007866290.1|	-	8.6e-06	24.3	0.3	0.0043	15.4	0.0	2.6	3	0	0	3	3	3	2	Bacterial	protein	of	unknown	function	(DUF853)
TrwB_AAD_bind	PF10412.4	gi|479326235|ref|YP_007866290.1|	-	3.6e-05	22.5	0.0	0.0042	15.7	0.0	2.2	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
T4SS-DNA_transf	PF02534.9	gi|479326235|ref|YP_007866290.1|	-	0.00017	20.3	0.4	0.00067	18.3	0.0	1.9	2	0	0	2	2	2	1	Type	IV	secretory	system	Conjugative	DNA	transfer
TraG-D_C	PF12696.2	gi|479326235|ref|YP_007866290.1|	-	0.0003	20.6	0.0	0.00072	19.4	0.0	1.7	1	0	0	1	1	1	1	TraM	recognition	site	of	TraD	and	TraG
FtsK_SpoIIIE	PF01580.13	gi|479326235|ref|YP_007866290.1|	-	0.0003	20.3	0.0	0.0025	17.3	0.0	2.1	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
AAA_22	PF13401.1	gi|479326235|ref|YP_007866290.1|	-	0.004	17.3	3.6	0.64	10.1	0.1	3.7	3	0	0	3	3	3	1	AAA	domain
SRPRB	PF09439.5	gi|479326235|ref|YP_007866290.1|	-	0.0072	15.5	1.9	1.1	8.4	0.2	2.3	2	0	0	2	2	2	2	Signal	recognition	particle	receptor	beta	subunit
ResIII	PF04851.10	gi|479326235|ref|YP_007866290.1|	-	0.01	15.7	0.0	0.029	14.2	0.0	1.8	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
ABC_tran	PF00005.22	gi|479326235|ref|YP_007866290.1|	-	0.012	15.9	0.0	0.037	14.3	0.0	1.9	2	0	0	2	2	2	0	ABC	transporter
T2SE	PF00437.15	gi|479326235|ref|YP_007866290.1|	-	0.012	14.5	0.1	0.027	13.3	0.0	1.6	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
DEAD	PF00270.24	gi|479326235|ref|YP_007866290.1|	-	0.015	14.7	0.6	1.1	8.7	0.0	3.0	3	0	0	3	3	3	0	DEAD/DEAH	box	helicase
AAA_5	PF07728.9	gi|479326235|ref|YP_007866290.1|	-	0.019	14.7	0.3	1.2	8.8	0.1	3.1	4	0	0	4	4	3	0	AAA	domain	(dynein-related	subfamily)
AAA_17	PF13207.1	gi|479326235|ref|YP_007866290.1|	-	0.026	15.3	2.2	0.087	13.6	0.5	2.8	2	2	0	2	2	2	0	AAA	domain
Capsule_synth	PF05159.9	gi|479326235|ref|YP_007866290.1|	-	0.057	12.8	0.1	0.14	11.5	0.1	1.7	1	0	0	1	1	1	0	Capsule	polysaccharide	biosynthesis	protein
IstB_IS21	PF01695.12	gi|479326235|ref|YP_007866290.1|	-	0.093	12.1	0.8	2.9	7.2	0.1	3.2	4	0	0	4	4	4	0	IstB-like	ATP	binding	protein
DsbD	PF02683.10	gi|479326235|ref|YP_007866290.1|	-	0.12	12.0	4.4	0.088	12.3	1.0	2.1	2	0	0	2	2	2	0	Cytochrome	C	biogenesis	protein	transmembrane	region
SIS	PF01380.17	gi|479326236|ref|YP_007866291.1|	-	3.1e-17	62.4	0.0	5.6e-17	61.5	0.0	1.4	1	0	0	1	1	1	1	SIS	domain
SIS_2	PF13580.1	gi|479326236|ref|YP_007866291.1|	-	3.2e-10	39.8	2.7	1.3e-07	31.4	0.4	2.3	1	1	1	2	2	2	2	SIS	domain
PRMT5	PF05185.11	gi|479326236|ref|YP_007866291.1|	-	0.015	14.2	0.8	0.99	8.2	0.0	2.1	1	1	1	2	2	2	0	PRMT5	arginine-N-methyltransferase
zf-C2H2_4	PF13894.1	gi|479326237|ref|YP_007866292.1|	-	0.0014	18.7	0.5	0.0028	17.8	0.3	1.5	1	0	0	1	1	1	1	C2H2-type	zinc	finger
zf-Di19	PF05605.7	gi|479326237|ref|YP_007866292.1|	-	0.6	10.2	2.9	1.4	9.1	1.9	1.8	1	1	0	1	1	1	0	Drought	induced	19	protein	(Di19),	zinc-binding
zf-C2H2	PF00096.21	gi|479326237|ref|YP_007866292.1|	-	0.72	10.3	4.2	6.8	7.2	2.9	2.2	1	1	0	1	1	1	0	Zinc	finger,	C2H2	type
Peptidase_M55	PF04951.8	gi|479326238|ref|YP_007866293.1|	-	0.15	11.2	0.0	2.3	7.3	0.0	2.0	1	1	1	2	2	2	0	D-aminopeptidase
NAD_binding_8	PF13450.1	gi|479326239|ref|YP_007866294.1|	-	0.0071	16.3	0.0	0.013	15.4	0.0	1.4	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
YkyA	PF10368.4	gi|479326241|ref|YP_007866296.1|	-	0.0091	15.3	1.1	0.0096	15.2	0.8	1.1	1	0	0	1	1	1	1	Putative	cell-wall	binding	lipoprotein
CitMHS	PF03600.11	gi|479326242|ref|YP_007866297.1|	-	3.5e-35	121.2	30.8	1.3e-32	112.8	17.3	2.0	1	1	1	2	2	2	2	Citrate	transporter
ArsB	PF02040.10	gi|479326242|ref|YP_007866297.1|	-	5.6e-13	48.6	25.0	7.1e-13	48.3	17.3	1.1	1	0	0	1	1	1	1	Arsenical	pump	membrane	protein
Arc_PepC_II	PF06847.6	gi|479326243|ref|YP_007866298.1|	-	4.2e-20	71.9	1.1	8.6e-20	70.9	0.1	2.0	2	0	0	2	2	2	1	Archaeal	Peptidase	A24	C-terminus	Type	II
Peptidase_A24	PF01478.13	gi|479326243|ref|YP_007866298.1|	-	1e-06	28.8	6.0	1e-06	28.8	4.2	1.8	2	0	0	2	2	2	1	Type	IV	leader	peptidase	family
CbiG_N	PF11760.3	gi|479326244|ref|YP_007866299.1|	-	4.9e-10	38.9	0.0	8.8e-10	38.1	0.0	1.5	1	0	0	1	1	1	1	Cobalamin	synthesis	G	N-terminal
CbiG_mid	PF11761.3	gi|479326244|ref|YP_007866299.1|	-	0.01	16.0	0.0	0.018	15.2	0.0	1.4	1	0	0	1	1	1	0	Cobalamin	biosynthesis	central	region
Peripla_BP_2	PF01497.13	gi|479326245|ref|YP_007866300.1|	-	1.5e-18	66.7	0.0	1.9e-18	66.5	0.0	1.1	1	0	0	1	1	1	1	Periplasmic	binding	protein
HMGL-like	PF00682.14	gi|479326247|ref|YP_007866302.1|	-	1.1e-48	165.9	0.0	2e-48	165.1	0.0	1.4	1	0	0	1	1	1	1	HMGL-like
LeuA_dimer	PF08502.5	gi|479326247|ref|YP_007866302.1|	-	1e-22	80.3	0.1	2.3e-22	79.1	0.1	1.6	1	0	0	1	1	1	1	LeuA	allosteric	(dimerisation)	domain
PEP_mutase	PF13714.1	gi|479326247|ref|YP_007866302.1|	-	0.021	14.0	0.0	0.034	13.3	0.0	1.3	1	0	0	1	1	1	0	Phosphoenolpyruvate	phosphomutase
UbiA	PF01040.13	gi|479326248|ref|YP_007866303.1|	-	7.4e-28	97.4	24.1	8.5e-28	97.2	16.7	1.1	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
YrhC	PF14143.1	gi|479326248|ref|YP_007866303.1|	-	0.23	11.4	2.7	10	6.1	0.1	3.5	3	0	0	3	3	3	0	YrhC-like	protein
Pyr_redox_2	PF07992.9	gi|479326249|ref|YP_007866304.1|	-	6.9e-08	32.6	0.0	6.7e-07	29.3	0.0	2.2	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|479326249|ref|YP_007866304.1|	-	8.6e-07	29.2	0.1	0.021	15.1	0.1	2.5	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.12	gi|479326249|ref|YP_007866304.1|	-	0.0018	17.4	0.0	0.003	16.6	0.0	1.4	1	0	0	1	1	1	1	Thi4	family
DAO	PF01266.19	gi|479326249|ref|YP_007866304.1|	-	0.0021	17.0	0.1	0.079	11.8	0.1	2.1	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
HI0933_like	PF03486.9	gi|479326249|ref|YP_007866304.1|	-	0.0024	16.4	0.3	1.1	7.6	0.0	2.3	2	0	0	2	2	2	2	HI0933-like	protein
Pyr_redox_3	PF13738.1	gi|479326249|ref|YP_007866304.1|	-	0.006	16.6	0.2	2.4	8.1	0.0	2.3	1	1	1	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|479326249|ref|YP_007866304.1|	-	0.014	15.4	0.2	0.044	13.8	0.0	1.9	2	0	0	2	2	2	0	NAD(P)-binding	Rossmann-like	domain
DUF1084	PF06454.6	gi|479326249|ref|YP_007866304.1|	-	0.099	11.6	0.0	0.12	11.3	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1084)
GIDA	PF01134.17	gi|479326249|ref|YP_007866304.1|	-	0.12	11.2	4.4	3	6.5	0.1	2.5	2	1	1	3	3	3	0	Glucose	inhibited	division	protein	A
NAD_binding_9	PF13454.1	gi|479326249|ref|YP_007866304.1|	-	0.14	11.9	0.0	10	5.8	0.0	2.3	1	1	1	2	2	2	0	FAD-NAD(P)-binding
DUF4401	PF14351.1	gi|479326251|ref|YP_007866306.1|	-	0.05	12.6	0.7	0.055	12.4	0.5	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4401)
7TMR-DISM_7TM	PF07695.6	gi|479326251|ref|YP_007866306.1|	-	0.05	13.2	1.8	0.05	13.2	1.3	1.0	1	0	0	1	1	1	0	7TM	diverse	intracellular	signalling
Internalin_N	PF12354.3	gi|479326251|ref|YP_007866306.1|	-	0.19	11.3	1.3	0.27	10.8	0.8	1.4	1	1	0	1	1	1	0	Bacterial	adhesion/invasion	protein	N	terminal
DUF4418	PF14387.1	gi|479326251|ref|YP_007866306.1|	-	0.22	11.2	1.9	0.23	11.2	1.3	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4418)
DUF4149	PF13664.1	gi|479326251|ref|YP_007866306.1|	-	0.27	11.3	2.2	0.34	11.0	1.5	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4149)
DUF21	PF01595.15	gi|479326251|ref|YP_007866306.1|	-	2.1	7.5	5.7	2.4	7.4	3.9	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF21
Nol1_Nop2_Fmu	PF01189.12	gi|479326252|ref|YP_007866307.1|	-	6e-28	98.0	0.0	1.1e-27	97.1	0.0	1.4	2	0	0	2	2	2	1	NOL1/NOP2/sun	family
DUF4477	PF14780.1	gi|479326252|ref|YP_007866307.1|	-	0.022	14.1	0.3	0.058	12.7	0.1	1.7	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4477)
MTS	PF05175.9	gi|479326252|ref|YP_007866307.1|	-	0.032	13.6	0.0	0.049	13.0	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	small	domain
T2SE	PF00437.15	gi|479326254|ref|YP_007866309.1|	-	2.9e-38	131.3	0.0	4.8e-38	130.6	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_23	PF13476.1	gi|479326254|ref|YP_007866309.1|	-	0.0009	19.6	2.6	0.0009	19.6	1.8	2.1	2	1	0	2	2	1	1	AAA	domain
ABC_tran	PF00005.22	gi|479326254|ref|YP_007866309.1|	-	0.0011	19.2	0.0	0.0032	17.7	0.0	1.8	2	0	0	2	2	2	1	ABC	transporter
Pox_A32	PF04665.7	gi|479326254|ref|YP_007866309.1|	-	0.0015	17.9	0.0	0.004	16.5	0.0	1.7	1	0	0	1	1	1	1	Poxvirus	A32	protein
AAA_21	PF13304.1	gi|479326254|ref|YP_007866309.1|	-	0.0027	17.7	0.1	0.0027	17.7	0.1	2.6	3	0	0	3	3	3	1	AAA	domain
AAA_29	PF13555.1	gi|479326254|ref|YP_007866309.1|	-	0.0029	17.0	0.0	0.0064	15.9	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
cobW	PF02492.14	gi|479326254|ref|YP_007866309.1|	-	0.0034	16.8	0.0	0.006	16.0	0.0	1.4	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
DUF87	PF01935.12	gi|479326254|ref|YP_007866309.1|	-	0.0044	16.8	0.3	0.063	13.0	0.0	2.4	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF87
AAA_22	PF13401.1	gi|479326254|ref|YP_007866309.1|	-	0.0057	16.8	0.0	0.026	14.6	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
Miro	PF08477.8	gi|479326254|ref|YP_007866309.1|	-	0.0063	16.9	0.0	0.015	15.8	0.0	1.6	1	0	0	1	1	1	1	Miro-like	protein
MobB	PF03205.9	gi|479326254|ref|YP_007866309.1|	-	0.0067	16.1	0.0	0.026	14.2	0.0	2.0	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
FtsK_SpoIIIE	PF01580.13	gi|479326254|ref|YP_007866309.1|	-	0.0096	15.4	0.0	0.017	14.6	0.0	1.3	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
AAA_10	PF12846.2	gi|479326254|ref|YP_007866309.1|	-	0.013	14.9	0.6	0.03	13.7	0.4	1.6	1	0	0	1	1	1	0	AAA-like	domain
AAA_16	PF13191.1	gi|479326254|ref|YP_007866309.1|	-	0.019	14.9	0.0	0.038	13.9	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
Dynamin_N	PF00350.18	gi|479326254|ref|YP_007866309.1|	-	0.036	13.8	0.3	0.28	10.9	0.0	2.2	2	0	0	2	2	2	0	Dynamin	family
Fructosamin_kin	PF03881.9	gi|479326254|ref|YP_007866309.1|	-	0.036	13.0	0.0	0.059	12.3	0.0	1.2	1	0	0	1	1	1	0	Fructosamine	kinase
TrwB_AAD_bind	PF10412.4	gi|479326254|ref|YP_007866309.1|	-	0.044	12.3	0.2	0.18	10.3	0.0	1.8	2	0	0	2	2	2	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA_19	PF13245.1	gi|479326254|ref|YP_007866309.1|	-	0.055	13.2	0.0	0.14	11.9	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
NACHT	PF05729.7	gi|479326254|ref|YP_007866309.1|	-	0.065	12.8	0.1	0.14	11.8	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
AAA_17	PF13207.1	gi|479326254|ref|YP_007866309.1|	-	0.068	13.9	0.0	0.34	11.7	0.0	2.3	2	1	0	2	2	2	0	AAA	domain
MMR_HSR1	PF01926.18	gi|479326254|ref|YP_007866309.1|	-	0.074	13.0	0.0	0.19	11.6	0.0	1.8	1	0	0	1	1	1	0	50S	ribosome-binding	GTPase
DUF258	PF03193.11	gi|479326254|ref|YP_007866309.1|	-	0.11	11.6	0.0	0.25	10.5	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
CHD5	PF04420.9	gi|479326255|ref|YP_007866310.1|	-	0.031	13.9	0.5	0.17	11.5	0.0	2.4	2	0	0	2	2	2	0	CHD5-like	protein
Dor1	PF04124.7	gi|479326255|ref|YP_007866310.1|	-	0.032	12.6	0.2	0.053	11.9	0.1	1.2	1	0	0	1	1	1	0	Dor1-like	family
DUF1628	PF07790.6	gi|479326256|ref|YP_007866311.1|	-	0.00053	20.6	0.5	0.00093	19.9	0.2	1.5	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF1628)
MacB_PCD	PF12704.2	gi|479326256|ref|YP_007866311.1|	-	0.04	13.5	2.5	0.051	13.1	1.7	1.2	1	1	0	1	1	1	0	MacB-like	periplasmic	core	domain
DUF3353	PF11833.3	gi|479326256|ref|YP_007866311.1|	-	0.055	12.9	0.6	0.082	12.3	0.4	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3353)
CW_binding_1	PF01473.15	gi|479326257|ref|YP_007866312.1|	-	0.15	12.1	2.5	0.55	10.4	1.8	2.0	1	0	0	1	1	1	0	Putative	cell	wall	binding	repeat
HTH_45	PF14947.1	gi|479326258|ref|YP_007866313.1|	-	3.8e-05	23.4	0.0	4.7e-05	23.1	0.0	1.1	1	0	0	1	1	1	1	Winged	helix-turn-helix
DUF2250	PF10007.4	gi|479326258|ref|YP_007866313.1|	-	0.0067	16.3	0.0	0.33	10.8	0.0	2.0	1	1	1	2	2	2	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF3116	PF11313.3	gi|479326258|ref|YP_007866313.1|	-	0.013	15.1	0.0	0.016	14.8	0.0	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3116)
YcfA	PF07927.7	gi|479326258|ref|YP_007866313.1|	-	0.13	12.2	0.3	0.34	10.8	0.1	1.9	1	1	0	1	1	1	0	YcfA-like	protein
HhH-GPD	PF00730.20	gi|479326259|ref|YP_007866314.1|	-	1.7e-20	73.3	0.0	2.2e-20	72.9	0.0	1.2	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
HHH	PF00633.18	gi|479326259|ref|YP_007866314.1|	-	0.0005	19.6	0.1	0.0014	18.1	0.0	1.8	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_5	PF14520.1	gi|479326259|ref|YP_007866314.1|	-	0.065	13.4	1.0	0.5	10.5	0.5	2.3	1	1	1	2	2	2	0	Helix-hairpin-helix	domain
EndIII_4Fe-2S	PF10576.4	gi|479326259|ref|YP_007866314.1|	-	0.12	12.5	10.1	0.22	11.7	7.0	1.4	1	0	0	1	1	1	0	Iron-sulfur	binding	domain	of	endonuclease	III
ParBc	PF02195.13	gi|479326260|ref|YP_007866315.1|	-	6.2e-11	42.2	0.1	1.3e-10	41.2	0.0	1.6	2	0	0	2	2	2	1	ParB-like	nuclease	domain
DUF1015	PF06245.6	gi|479326260|ref|YP_007866315.1|	-	0.00026	19.6	0.0	0.059	11.8	0.0	2.1	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF1015)
Glyco_tranf_2_3	PF13641.1	gi|479326261|ref|YP_007866316.1|	-	3.2e-27	95.8	0.0	4.1e-27	95.4	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|479326261|ref|YP_007866316.1|	-	9.7e-19	67.8	1.4	9.7e-19	67.8	1.0	2.0	2	0	0	2	2	2	1	Glycosyl	transferase	family	group	2
Glycos_transf_2	PF00535.21	gi|479326261|ref|YP_007866316.1|	-	1e-17	64.3	0.0	1.7e-17	63.6	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.1	gi|479326261|ref|YP_007866316.1|	-	8.7e-14	51.1	0.2	1.2e-12	47.5	0.0	2.1	2	0	0	2	2	2	1	Glycosyl	transferase	family	21
Glyco_tranf_2_2	PF10111.4	gi|479326261|ref|YP_007866316.1|	-	5.8e-05	22.3	0.0	8.6e-05	21.7	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Cellulose_synt	PF03552.9	gi|479326261|ref|YP_007866316.1|	-	0.00038	18.9	1.8	0.00058	18.3	1.2	1.3	1	0	0	1	1	1	1	Cellulose	synthase
Osmo_MPGsynth	PF09488.5	gi|479326261|ref|YP_007866316.1|	-	0.076	11.6	0.0	0.12	11.0	0.0	1.2	1	0	0	1	1	1	0	Mannosyl-3-phosphoglycerate	synthase	(osmo_MPGsynth)
DUF4234	PF14018.1	gi|479326261|ref|YP_007866316.1|	-	4.4	7.1	10.1	0.77	9.5	0.2	2.9	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4234)
DEAD_assoc	PF08494.6	gi|479326262|ref|YP_007866317.1|	-	7.9e-59	198.5	0.3	2.1e-58	197.1	0.2	1.8	1	0	0	1	1	1	1	DEAD/H	associated
DEAD	PF00270.24	gi|479326262|ref|YP_007866317.1|	-	5e-30	104.2	0.0	8e-29	100.2	0.0	2.7	3	0	0	3	3	3	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|479326262|ref|YP_007866317.1|	-	3.5e-13	49.2	0.0	1.4e-12	47.2	0.0	2.0	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|479326262|ref|YP_007866317.1|	-	1.6e-07	31.3	0.0	1e-06	28.7	0.0	2.3	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Transketolase_C	PF02780.15	gi|479326262|ref|YP_007866317.1|	-	3.8e-05	23.6	0.1	0.0015	18.4	0.0	3.2	3	0	0	3	3	3	1	Transketolase,	C-terminal	domain
AAA_22	PF13401.1	gi|479326262|ref|YP_007866317.1|	-	0.0023	18.0	0.0	10	6.2	0.0	3.8	3	1	0	3	3	3	1	AAA	domain
DUF1938	PF09153.5	gi|479326262|ref|YP_007866317.1|	-	0.02	14.7	0.4	0.15	11.9	0.1	2.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1938)
AAA_10	PF12846.2	gi|479326262|ref|YP_007866317.1|	-	0.022	14.2	0.0	4.2	6.7	0.0	2.6	2	0	0	2	2	2	0	AAA-like	domain
HrcA_DNA-bdg	PF03444.10	gi|479326263|ref|YP_007866318.1|	-	1e-35	120.9	1.3	1.9e-35	120.1	0.2	2.0	2	0	0	2	2	2	1	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
CBS	PF00571.23	gi|479326263|ref|YP_007866318.1|	-	2.9e-29	100.5	0.4	1.3e-15	56.8	0.2	2.5	2	0	0	2	2	2	2	CBS	domain
Rrf2	PF02082.15	gi|479326263|ref|YP_007866318.1|	-	2.7e-08	33.7	0.0	1e-07	31.9	0.0	2.0	1	0	0	1	1	1	1	Transcriptional	regulator
TrmB	PF01978.14	gi|479326263|ref|YP_007866318.1|	-	0.002	17.7	0.3	0.068	12.8	0.0	2.7	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|479326263|ref|YP_007866318.1|	-	0.012	15.3	0.0	0.047	13.3	0.0	2.1	2	0	0	2	2	2	0	MarR	family
HTH_IclR	PF09339.5	gi|479326263|ref|YP_007866318.1|	-	0.017	14.6	0.0	0.037	13.6	0.0	1.6	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|479326263|ref|YP_007866318.1|	-	0.039	13.4	0.4	2.7	7.5	0.0	2.8	2	0	0	2	2	2	0	Sigma-70,	region	4
Sigma70_r4	PF04545.11	gi|479326263|ref|YP_007866318.1|	-	0.072	12.4	0.2	0.83	9.0	0.0	2.7	2	2	1	3	3	3	0	Sigma-70,	region	4
PRC	PF05239.11	gi|479326263|ref|YP_007866318.1|	-	0.072	12.9	5.2	13	5.7	0.1	3.9	4	0	0	4	4	4	0	PRC-barrel	domain
Penicillinase_R	PF03965.11	gi|479326263|ref|YP_007866318.1|	-	0.093	12.8	0.0	11	6.1	0.0	2.3	2	0	0	2	2	2	0	Penicillinase	repressor
DUF2192	PF09958.4	gi|479326264|ref|YP_007866319.1|	-	4.8e-87	291.0	7.4	5.3e-87	290.8	5.1	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2192)
Phasin	PF05597.6	gi|479326264|ref|YP_007866319.1|	-	0.022	14.4	0.1	0.038	13.7	0.1	1.3	1	0	0	1	1	1	0	Poly(hydroxyalcanoate)	granule	associated	protein	(phasin)
EntA_Immun	PF08951.5	gi|479326264|ref|YP_007866319.1|	-	1.1	9.4	7.6	9.6	6.4	0.3	3.4	2	1	1	3	3	3	0	Enterocin	A	Immunity
NinB	PF05772.7	gi|479326265|ref|YP_007866320.1|	-	0.002	17.7	0.5	0.0026	17.3	0.4	1.4	1	1	0	1	1	1	1	NinB	protein
ADIP	PF11559.3	gi|479326265|ref|YP_007866320.1|	-	0.022	14.6	0.7	0.029	14.2	0.5	1.1	1	0	0	1	1	1	0	Afadin-	and	alpha	-actinin-Binding
Ada3	PF10198.4	gi|479326265|ref|YP_007866320.1|	-	0.03	14.0	0.8	0.043	13.5	0.6	1.2	1	0	0	1	1	1	0	Histone	acetyltransferases	subunit	3
DivIC	PF04977.10	gi|479326265|ref|YP_007866320.1|	-	0.06	12.8	1.3	0.086	12.3	0.9	1.2	1	0	0	1	1	1	0	Septum	formation	initiator
FlxA	PF14282.1	gi|479326265|ref|YP_007866320.1|	-	0.1	12.5	0.7	0.13	12.1	0.5	1.2	1	0	0	1	1	1	0	FlxA-like	protein
HTH_3	PF01381.17	gi|479326266|ref|YP_007866321.1|	-	4.6e-10	39.1	0.1	1.6e-09	37.4	0.0	1.9	2	0	0	2	2	2	1	Helix-turn-helix
HTH_11	PF08279.7	gi|479326266|ref|YP_007866321.1|	-	4.2e-05	23.0	0.7	8.5e-05	22.1	0.1	1.9	2	1	0	2	2	2	1	HTH	domain
HTH_19	PF12844.2	gi|479326266|ref|YP_007866321.1|	-	0.00017	21.5	0.7	0.00039	20.4	0.1	1.8	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|479326266|ref|YP_007866321.1|	-	0.00022	20.7	0.0	0.00046	19.7	0.0	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_24	PF13412.1	gi|479326266|ref|YP_007866321.1|	-	0.00049	19.4	0.1	0.0017	17.6	0.1	2.0	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
Trp_repressor	PF01371.14	gi|479326266|ref|YP_007866321.1|	-	0.00089	19.1	0.4	0.008	16.0	0.0	2.3	1	1	2	3	3	3	1	Trp	repressor	protein
HTH_31	PF13560.1	gi|479326266|ref|YP_007866321.1|	-	0.0023	18.0	0.0	0.0032	17.6	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_10	PF04967.7	gi|479326266|ref|YP_007866321.1|	-	0.0045	16.5	0.1	0.023	14.2	0.0	2.1	2	0	0	2	2	2	1	HTH	DNA	binding	domain
Talin_middle	PF09141.5	gi|479326266|ref|YP_007866321.1|	-	0.0054	16.4	0.1	0.0075	15.9	0.1	1.4	1	1	0	1	1	1	1	Talin,	middle	domain
HTH_5	PF01022.15	gi|479326266|ref|YP_007866321.1|	-	0.017	14.7	0.0	0.055	13.1	0.0	1.9	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
IF2_N	PF04760.10	gi|479326266|ref|YP_007866321.1|	-	0.028	14.0	1.4	0.17	11.5	0.0	2.8	2	2	1	3	3	3	0	Translation	initiation	factor	IF-2,	N-terminal	region
MarR_2	PF12802.2	gi|479326266|ref|YP_007866321.1|	-	0.033	13.8	0.0	0.078	12.6	0.0	1.6	1	0	0	1	1	1	0	MarR	family
HTH_26	PF13443.1	gi|479326266|ref|YP_007866321.1|	-	0.051	13.7	0.1	0.23	11.6	0.0	2.0	2	0	0	2	2	2	0	Cro/C1-type	HTH	DNA-binding	domain
Sigma70_r4_2	PF08281.7	gi|479326266|ref|YP_007866321.1|	-	0.059	12.8	0.0	0.13	11.7	0.0	1.6	1	0	0	1	1	1	0	Sigma-70,	region	4
Sigma70_r3	PF04539.11	gi|479326266|ref|YP_007866321.1|	-	0.088	12.7	0.0	0.23	11.3	0.0	1.7	1	0	0	1	1	1	0	Sigma-70	region	3
DUF948	PF06103.6	gi|479326266|ref|YP_007866321.1|	-	0.12	12.2	0.4	2.1	8.2	0.0	2.1	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
HTH_28	PF13518.1	gi|479326266|ref|YP_007866321.1|	-	0.13	12.2	0.0	0.27	11.2	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
Stork_head	PF10264.4	gi|479326266|ref|YP_007866321.1|	-	0.14	12.3	0.4	2.3	8.4	0.0	2.5	1	1	1	2	2	2	0	Winged	helix	Storkhead-box1	domain
HTH_8	PF02954.14	gi|479326266|ref|YP_007866321.1|	-	0.16	11.5	0.4	0.51	9.9	0.1	2.0	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	Fis	family
DUF4319	PF14203.1	gi|479326266|ref|YP_007866321.1|	-	0.23	11.0	4.4	0.15	11.6	1.5	1.8	2	1	0	2	2	1	0	Domain	of	unknown	function	(DUF4319)
ADH_N	PF08240.7	gi|479326267|ref|YP_007866322.1|	-	0.013	15.2	0.0	0.077	12.7	0.0	2.0	1	1	0	1	1	1	0	Alcohol	dehydrogenase	GroES-like	domain
Pyr_redox_2	PF07992.9	gi|479326267|ref|YP_007866322.1|	-	0.013	15.3	0.0	0.03	14.2	0.0	1.6	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Aminotran_1_2	PF00155.16	gi|479326268|ref|YP_007866323.1|	-	1.3e-40	139.4	0.0	1.5e-40	139.2	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_MocR	PF12897.2	gi|479326268|ref|YP_007866323.1|	-	1.7e-14	53.2	0.0	2.7e-14	52.5	0.0	1.2	1	0	0	1	1	1	1	Alanine-glyoxylate	amino-transferase
DegT_DnrJ_EryC1	PF01041.12	gi|479326268|ref|YP_007866323.1|	-	0.015	14.4	0.0	0.025	13.6	0.0	1.3	1	0	0	1	1	1	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Beta_elim_lyase	PF01212.16	gi|479326268|ref|YP_007866323.1|	-	0.02	14.0	0.0	0.035	13.2	0.0	1.3	1	0	0	1	1	1	0	Beta-eliminating	lyase
Peptidase_C53	PF05550.6	gi|479326268|ref|YP_007866323.1|	-	0.044	13.2	0.0	0.085	12.3	0.0	1.4	1	0	0	1	1	1	0	Pestivirus	Npro	endopeptidase	C53
Cys_Met_Meta_PP	PF01053.15	gi|479326268|ref|YP_007866323.1|	-	0.074	11.3	0.0	0.11	10.7	0.0	1.2	1	0	0	1	1	1	0	Cys/Met	metabolism	PLP-dependent	enzyme
CbiK	PF06180.6	gi|479326268|ref|YP_007866323.1|	-	0.14	11.2	0.0	0.25	10.3	0.0	1.3	1	0	0	1	1	1	0	Cobalt	chelatase	(CbiK)
MoCF_biosynth	PF00994.19	gi|479326269|ref|YP_007866324.1|	-	7.2e-32	109.7	0.0	1e-31	109.2	0.0	1.2	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
MT	PF12777.2	gi|479326269|ref|YP_007866324.1|	-	0.025	13.3	0.1	0.037	12.7	0.1	1.2	1	0	0	1	1	1	0	Microtubule-binding	stalk	of	dynein	motor
DUF3888	PF13027.1	gi|479326269|ref|YP_007866324.1|	-	0.046	13.5	1.3	0.098	12.5	0.9	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3888)
Abhydrolase_6	PF12697.2	gi|479326270|ref|YP_007866325.1|	-	5.2e-34	118.1	0.0	6e-34	117.8	0.0	1.0	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|479326270|ref|YP_007866325.1|	-	2e-23	83.1	0.0	6.7e-21	74.8	0.0	2.0	1	1	0	1	1	1	1	alpha/beta	hydrolase	fold
Abhydrolase_5	PF12695.2	gi|479326270|ref|YP_007866325.1|	-	2.1e-16	59.9	0.0	1.9e-15	56.8	0.0	2.0	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Hydrolase_4	PF12146.3	gi|479326270|ref|YP_007866325.1|	-	0.00016	21.4	0.0	0.00034	20.4	0.0	1.5	1	0	0	1	1	1	1	Putative	lysophospholipase
Ndr	PF03096.9	gi|479326270|ref|YP_007866325.1|	-	0.00056	18.4	0.0	0.00076	18.0	0.0	1.3	1	0	0	1	1	1	1	Ndr	family
DUF1057	PF06342.7	gi|479326270|ref|YP_007866325.1|	-	0.01	14.6	0.1	1.5	7.5	0.0	2.5	2	1	1	3	3	3	0	Alpha/beta	hydrolase	of	unknown	function	(DUF1057)
DUF915	PF06028.6	gi|479326270|ref|YP_007866325.1|	-	0.043	12.8	0.1	0.43	9.6	0.1	2.6	2	1	0	2	2	2	0	Alpha/beta	hydrolase	of	unknown	function	(DUF915)
DUF2305	PF10230.4	gi|479326270|ref|YP_007866325.1|	-	0.12	11.7	0.0	0.18	11.1	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	conserved	protein	(DUF2305)
B5	PF03484.10	gi|479326271|ref|YP_007866326.1|	-	2.8e-19	68.6	4.7	1e-17	63.6	0.8	3.3	3	0	0	3	3	3	1	tRNA	synthetase	B5	domain
B3_4	PF03483.12	gi|479326271|ref|YP_007866326.1|	-	1.2e-12	47.6	0.2	3.6e-12	46.0	0.1	1.8	1	1	0	1	1	1	1	B3/4	domain
ArsB	PF02040.10	gi|479326271|ref|YP_007866326.1|	-	0.13	11.2	0.0	0.2	10.6	0.0	1.1	1	0	0	1	1	1	0	Arsenical	pump	membrane	protein
tRNA-synt_2d	PF01409.15	gi|479326272|ref|YP_007866327.1|	-	4.9e-84	281.3	0.0	8.5e-84	280.6	0.0	1.4	1	1	0	1	1	1	1	tRNA	synthetases	class	II	core	domain	(F)
TrmB	PF01978.14	gi|479326272|ref|YP_007866327.1|	-	2.4e-06	27.1	8.4	3.5e-06	26.6	0.5	3.8	2	1	2	4	4	4	1	Sugar-specific	transcriptional	regulator	TrmB
tRNA-synt_2b	PF00587.20	gi|479326272|ref|YP_007866327.1|	-	5.7e-06	26.0	0.8	1.7e-05	24.5	0.6	1.8	1	1	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HTH_24	PF13412.1	gi|479326272|ref|YP_007866327.1|	-	3.6e-05	23.0	0.3	3.6e-05	23.0	0.2	2.0	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
tRNA-synt_2	PF00152.15	gi|479326272|ref|YP_007866327.1|	-	8.3e-05	21.5	1.2	0.034	12.9	0.0	2.8	3	0	0	3	3	3	2	tRNA	synthetases	class	II	(D,	K	and	N)
HTH_27	PF13463.1	gi|479326272|ref|YP_007866327.1|	-	0.00011	22.3	1.5	0.0015	18.8	0.0	3.2	4	0	0	4	4	3	1	Winged	helix	DNA-binding	domain
S10_plectin	PF03501.10	gi|479326272|ref|YP_007866327.1|	-	0.00078	19.2	0.4	0.0079	16.0	0.0	2.5	2	1	1	3	3	3	1	Plectin/S10	domain
Penicillinase_R	PF03965.11	gi|479326272|ref|YP_007866327.1|	-	0.0017	18.3	0.4	0.0078	16.2	0.0	2.3	2	0	0	2	2	2	1	Penicillinase	repressor
HTH_45	PF14947.1	gi|479326272|ref|YP_007866327.1|	-	0.004	16.9	2.6	0.066	13.0	0.2	2.7	2	0	0	2	2	2	1	Winged	helix-turn-helix
MarR_2	PF12802.2	gi|479326272|ref|YP_007866327.1|	-	0.0097	15.5	2.6	0.063	12.9	0.0	3.1	4	0	0	4	4	4	1	MarR	family
HTH_IclR	PF09339.5	gi|479326272|ref|YP_007866327.1|	-	0.012	15.2	0.0	0.03	13.9	0.0	1.7	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
Rrf2	PF02082.15	gi|479326272|ref|YP_007866327.1|	-	0.018	15.1	0.2	0.29	11.2	0.0	2.7	2	0	0	2	2	2	0	Transcriptional	regulator
FeoC	PF09012.5	gi|479326272|ref|YP_007866327.1|	-	0.094	12.4	0.0	0.2	11.4	0.0	1.5	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
MarR	PF01047.17	gi|479326272|ref|YP_007866327.1|	-	0.18	11.5	1.6	0.3	10.8	0.1	2.2	2	0	0	2	2	2	0	MarR	family
PadR	PF03551.9	gi|479326272|ref|YP_007866327.1|	-	0.33	10.7	4.7	0.18	11.6	0.2	2.9	4	0	0	4	4	4	0	Transcriptional	regulator	PadR-like	family
DUF2250	PF10007.4	gi|479326272|ref|YP_007866327.1|	-	0.45	10.4	8.5	5.3	7.0	0.8	3.7	2	2	1	3	3	3	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Lactamase_B_3	PF13483.1	gi|479326273|ref|YP_007866328.1|	-	9.2e-20	70.9	0.1	1.2e-19	70.5	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.2	gi|479326273|ref|YP_007866328.1|	-	3.5e-15	56.0	0.1	4.8e-15	55.6	0.1	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|479326273|ref|YP_007866328.1|	-	2.7e-13	50.0	0.5	3.4e-13	49.6	0.4	1.1	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Peptidase_M24	PF00557.19	gi|479326274|ref|YP_007866329.1|	-	2.1e-39	135.2	0.0	2.5e-39	135.0	0.0	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
DUF1512	PF07431.7	gi|479326275|ref|YP_007866330.1|	-	2.3e-161	536.4	7.4	2.7e-161	536.2	5.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1512)
N6_N4_Mtase	PF01555.13	gi|479326275|ref|YP_007866330.1|	-	0.11	11.9	0.0	0.14	11.6	0.0	1.3	1	0	0	1	1	1	0	DNA	methylase
DUF4537	PF15057.1	gi|479326276|ref|YP_007866331.1|	-	0.1	12.3	0.0	0.11	12.3	0.0	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4537)
HD	PF01966.17	gi|479326277|ref|YP_007866332.1|	-	5.7e-08	32.7	0.0	1.3e-07	31.6	0.0	1.7	1	0	0	1	1	1	1	HD	domain
Hydrolase_3	PF08282.7	gi|479326278|ref|YP_007866333.1|	-	5.6e-33	114.5	1.6	1.7e-19	70.4	0.5	2.0	1	1	1	2	2	2	2	haloacid	dehalogenase-like	hydrolase
S6PP	PF05116.8	gi|479326278|ref|YP_007866333.1|	-	1.1e-08	34.7	0.5	4.4e-05	22.8	0.1	3.0	2	1	1	3	3	3	2	Sucrose-6F-phosphate	phosphohydrolase
HAD	PF12710.2	gi|479326278|ref|YP_007866333.1|	-	5.5e-08	33.1	1.7	5.8e-06	26.5	0.0	2.7	1	1	1	2	2	2	1	haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|479326278|ref|YP_007866333.1|	-	0.00039	20.8	2.5	0.036	14.4	0.0	3.0	1	1	1	2	2	2	1	haloacid	dehalogenase-like	hydrolase
Flagellin_IN	PF07196.8	gi|479326278|ref|YP_007866333.1|	-	0.0069	16.3	0.2	0.014	15.3	0.1	1.5	1	0	0	1	1	1	1	Flagellin	hook	IN	motif
Hydrolase_like	PF13242.1	gi|479326278|ref|YP_007866333.1|	-	0.069	12.8	0.0	0.11	12.1	0.0	1.4	1	0	0	1	1	1	0	HAD-hyrolase-like
tRNA-synt_1c	PF00749.16	gi|479326279|ref|YP_007866334.1|	-	4e-79	265.5	0.0	1.3e-78	263.8	0.0	1.8	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
tRNA-synt_1c_C	PF03950.13	gi|479326279|ref|YP_007866334.1|	-	4.7e-23	81.7	1.4	1e-22	80.6	1.0	1.6	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(E	and	Q),	anti-codon	binding	domain
Atg8	PF02991.11	gi|479326279|ref|YP_007866334.1|	-	0.042	13.8	0.3	0.15	12.0	0.2	2.0	1	0	0	1	1	1	0	Autophagy	protein	Atg8	ubiquitin	like
Pex19	PF04614.7	gi|479326279|ref|YP_007866334.1|	-	0.064	12.8	0.5	0.25	10.9	0.1	1.9	2	0	0	2	2	2	0	Pex19	protein	family
Ribosomal_L7Ae	PF01248.21	gi|479326280|ref|YP_007866335.1|	-	1.2e-33	114.4	2.0	1.5e-33	114.1	1.4	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
PELOTA_1	PF15608.1	gi|479326280|ref|YP_007866335.1|	-	0.00082	19.1	0.0	0.0011	18.6	0.0	1.3	1	0	0	1	1	1	1	PELOTA	RNA	binding	domain
RNase_P_pop3	PF08228.6	gi|479326280|ref|YP_007866335.1|	-	0.0042	16.9	0.0	0.0048	16.7	0.0	1.1	1	0	0	1	1	1	1	RNase	P	subunit	Pop3
DbpA	PF03880.10	gi|479326280|ref|YP_007866335.1|	-	0.017	14.7	0.3	0.23	11.1	0.1	2.7	3	1	0	3	3	3	0	DbpA	RNA	binding	domain
tRNA-synt_2	PF00152.15	gi|479326281|ref|YP_007866336.1|	-	1e-98	330.2	0.4	1.2e-98	329.9	0.3	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.20	gi|479326281|ref|YP_007866336.1|	-	6.2e-11	42.0	0.2	1.3e-10	40.9	0.1	1.6	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.15	gi|479326281|ref|YP_007866336.1|	-	2.2e-08	33.6	0.3	1.7e-05	24.1	0.0	3.1	3	0	0	3	3	3	2	tRNA	synthetases	class	II	core	domain	(F)
SAP	PF02037.22	gi|479326281|ref|YP_007866336.1|	-	0.032	13.7	0.5	1.3	8.6	0.0	3.0	3	0	0	3	3	3	0	SAP	domain
LEM	PF03020.10	gi|479326281|ref|YP_007866336.1|	-	0.045	13.1	0.1	0.24	10.8	0.0	2.4	2	0	0	2	2	2	0	LEM	domain
tRNA-synt_2b	PF00587.20	gi|479326281|ref|YP_007866336.1|	-	0.063	12.8	0.4	11	5.6	0.0	2.7	3	0	0	3	3	3	0	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
Peptidase_M50	PF02163.17	gi|479326282|ref|YP_007866337.1|	-	7.8e-26	90.2	1.2	7.8e-26	90.2	0.8	2.2	3	1	0	3	3	3	1	Peptidase	family	M50
PDZ_2	PF13180.1	gi|479326282|ref|YP_007866337.1|	-	8.5e-08	31.9	0.0	1.9e-07	30.8	0.0	1.6	1	0	0	1	1	1	1	PDZ	domain
PDZ	PF00595.19	gi|479326282|ref|YP_007866337.1|	-	3.9e-06	26.9	0.0	8.4e-06	25.8	0.0	1.4	1	0	0	1	1	1	1	PDZ	domain	(Also	known	as	DHR	or	GLGF)
Tricorn_PDZ	PF14685.1	gi|479326282|ref|YP_007866337.1|	-	0.012	15.3	0.0	0.022	14.5	0.0	1.4	1	0	0	1	1	1	0	Tricorn	protease	PDZ	domain
NTP_transf_2	PF01909.18	gi|479326283|ref|YP_007866338.1|	-	7.7e-06	26.1	0.2	1.4e-05	25.2	0.1	1.8	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
DUF1122	PF06557.6	gi|479326284|ref|YP_007866339.1|	-	2.5e-56	189.4	0.4	3.3e-56	189.1	0.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1122)
DUF3271	PF11675.3	gi|479326284|ref|YP_007866339.1|	-	0.045	12.8	0.3	0.068	12.2	0.2	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3271)
CMAS	PF02353.15	gi|479326284|ref|YP_007866339.1|	-	0.13	11.3	0.0	0.15	11.1	0.0	1.2	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
Radical_SAM	PF04055.16	gi|479326285|ref|YP_007866340.1|	-	6.1e-09	36.2	1.2	3.6e-07	30.5	0.0	3.2	2	2	1	3	3	3	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|479326285|ref|YP_007866340.1|	-	2.4e-08	34.0	0.0	6.1e-08	32.7	0.0	1.6	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|479326285|ref|YP_007866340.1|	-	9.6e-08	32.2	0.3	6.5e-06	26.3	0.0	2.7	2	1	0	2	2	2	1	4Fe-4S	single	cluster	domain
eRF1_1	PF03463.10	gi|479326286|ref|YP_007866341.1|	-	1e-25	89.8	1.7	1.8e-25	89.0	0.4	2.0	2	0	0	2	2	2	1	eRF1	domain	1
eRF1_3	PF03465.10	gi|479326286|ref|YP_007866341.1|	-	2.2e-22	79.4	0.8	8.6e-22	77.5	0.2	2.1	2	0	0	2	2	2	1	eRF1	domain	3
eRF1_2	PF03464.10	gi|479326286|ref|YP_007866341.1|	-	5e-17	62.4	0.3	8.7e-17	61.6	0.2	1.4	1	0	0	1	1	1	1	eRF1	domain	2
EutQ	PF06249.7	gi|479326286|ref|YP_007866341.1|	-	0.022	14.2	0.3	1.1	8.8	0.0	2.7	2	1	1	3	3	3	0	Ethanolamine	utilisation	protein	EutQ
Acetyltransf_1	PF00583.19	gi|479326287|ref|YP_007866342.1|	-	9.6e-18	64.0	0.2	1.4e-17	63.5	0.1	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|479326287|ref|YP_007866342.1|	-	5.8e-13	48.8	0.4	8.6e-13	48.2	0.3	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|479326287|ref|YP_007866342.1|	-	7.1e-12	45.4	0.0	9.6e-12	45.0	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|479326287|ref|YP_007866342.1|	-	9.3e-08	31.9	0.0	2.3e-07	30.6	0.0	1.7	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|479326287|ref|YP_007866342.1|	-	2.2e-07	30.9	0.7	3.1e-07	30.4	0.5	1.4	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|479326287|ref|YP_007866342.1|	-	6.7e-06	25.7	0.0	1.1e-05	25.0	0.0	1.5	1	1	0	1	1	1	1	FR47-like	protein
GNAT_acetyltr_2	PF13718.1	gi|479326287|ref|YP_007866342.1|	-	2e-05	24.0	0.0	0.0012	18.1	0.0	2.1	1	1	0	1	1	1	1	GNAT	acetyltransferase	2
Acetyltransf_8	PF13523.1	gi|479326287|ref|YP_007866342.1|	-	0.00012	21.9	0.0	0.00016	21.5	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.1	gi|479326287|ref|YP_007866342.1|	-	0.00083	19.5	0.0	0.0011	19.1	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.1	gi|479326287|ref|YP_007866342.1|	-	0.015	15.1	0.0	0.027	14.3	0.0	1.4	1	0	0	1	1	1	0	GCN5-related	N-acetyl-transferase
DUF4367	PF14285.1	gi|479326287|ref|YP_007866342.1|	-	0.062	12.6	0.6	0.088	12.1	0.4	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4367)
Acetyltransf_13	PF13880.1	gi|479326287|ref|YP_007866342.1|	-	0.078	12.7	0.0	0.13	11.9	0.0	1.3	1	0	0	1	1	1	0	ESCO1/2	acetyl-transferase
Acetyltransf_6	PF13480.1	gi|479326287|ref|YP_007866342.1|	-	0.12	12.3	0.0	0.16	11.8	0.0	1.3	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
DNA_pol_B_exo1	PF03104.14	gi|479326288|ref|YP_007866343.1|	-	3.4e-42	144.4	1.9	3.4e-42	144.4	1.3	2.2	3	0	0	3	3	3	1	DNA	polymerase	family	B,	exonuclease	domain
DNA_pol_B	PF00136.16	gi|479326288|ref|YP_007866343.1|	-	3.3e-24	85.5	3.2	2.9e-17	62.6	0.4	2.4	1	1	1	2	2	2	2	DNA	polymerase	family	B
Toprim_4	PF13662.1	gi|479326289|ref|YP_007866344.1|	-	1.5e-09	37.6	0.0	4.6e-09	36.1	0.0	1.8	1	0	0	1	1	1	1	Toprim	domain
Toprim	PF01751.17	gi|479326289|ref|YP_007866344.1|	-	3.4e-05	23.7	0.6	0.00015	21.6	0.1	2.3	2	0	0	2	2	2	1	Toprim	domain
HHH_3	PF12836.2	gi|479326289|ref|YP_007866344.1|	-	0.26	11.2	0.1	0.26	11.2	0.1	2.8	3	0	0	3	3	3	0	Helix-hairpin-helix	motif
tRNA-synt_1b	PF00579.20	gi|479326290|ref|YP_007866345.1|	-	1.2e-49	169.0	0.3	2.7e-35	121.9	0.1	2.1	1	1	1	2	2	2	2	tRNA	synthetases	class	I	(W	and	Y)
Extensin_1	PF02095.10	gi|479326291|ref|YP_007866346.1|	-	0.024	14.6	1.4	0.052	13.5	0.9	1.6	1	0	0	1	1	1	0	Extensin-like	protein	repeat
AIRS	PF00586.19	gi|479326292|ref|YP_007866347.1|	-	7.1e-10	39.0	0.0	1.7e-09	37.7	0.0	1.6	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
AIRS_C	PF02769.17	gi|479326292|ref|YP_007866347.1|	-	4.8e-07	29.9	0.0	9.5e-07	28.9	0.0	1.5	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
HrpF	PF06266.7	gi|479326292|ref|YP_007866347.1|	-	0.078	13.1	0.0	0.24	11.5	0.0	1.8	2	0	0	2	2	2	0	HrpF	protein
CbiC	PF02570.10	gi|479326292|ref|YP_007866347.1|	-	0.13	11.6	0.1	0.24	10.7	0.1	1.3	1	0	0	1	1	1	0	Precorrin-8X	methylmutase
Ribosomal_S13	PF00416.17	gi|479326293|ref|YP_007866348.1|	-	9.7e-35	119.2	0.0	1.3e-34	118.8	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S13/S18
HHH_4	PF14490.1	gi|479326293|ref|YP_007866348.1|	-	0.0026	17.4	0.0	0.0046	16.6	0.0	1.4	1	0	0	1	1	1	1	Helix-hairpin-helix	containing	domain
S4	PF01479.20	gi|479326294|ref|YP_007866349.1|	-	4.7e-18	64.3	0.1	9.9e-18	63.3	0.1	1.6	1	0	0	1	1	1	1	S4	domain
Ribosomal_S4	PF00163.14	gi|479326294|ref|YP_007866349.1|	-	0.016	15.5	0.9	0.028	14.7	0.3	1.7	1	1	1	2	2	2	0	Ribosomal	protein	S4/S9	N-terminal	domain
Ribosomal_S11	PF00411.14	gi|479326295|ref|YP_007866350.1|	-	1.6e-43	147.3	0.1	1.8e-43	147.1	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S11
RNA_pol_A_bac	PF01000.21	gi|479326296|ref|YP_007866351.1|	-	4.6e-28	97.6	0.0	8.9e-28	96.6	0.0	1.5	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/RpoA	insert	domain
RNA_pol_L	PF01193.19	gi|479326296|ref|YP_007866351.1|	-	8e-11	40.8	0.0	9.7e-11	40.6	0.0	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
Fer4_9	PF13187.1	gi|479326296|ref|YP_007866351.1|	-	6.9e-05	23.0	6.6	0.0015	18.7	1.8	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|479326296|ref|YP_007866351.1|	-	0.043	14.2	8.4	0.39	11.1	2.9	2.6	2	1	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|479326296|ref|YP_007866351.1|	-	0.1	12.3	11.4	0.55	10.0	0.8	2.7	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|479326296|ref|YP_007866351.1|	-	0.61	10.1	7.9	9	6.4	0.9	2.7	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Ribosomal_L18e	PF00828.14	gi|479326297|ref|YP_007866352.1|	-	5.3e-14	52.6	0.2	6.8e-14	52.3	0.2	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L18e/L15
Ribosomal_L13	PF00572.13	gi|479326298|ref|YP_007866353.1|	-	5.4e-28	97.6	0.2	6.7e-28	97.3	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L13
Ribosomal_S9	PF00380.14	gi|479326299|ref|YP_007866354.1|	-	3.5e-29	101.4	0.1	4e-29	101.3	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S9/S16
RNA_pol_N	PF01194.12	gi|479326300|ref|YP_007866355.1|	-	3.8e-31	106.8	0.4	4.2e-31	106.7	0.3	1.0	1	0	0	1	1	1	1	RNA	polymerases	N	/	8	kDa	subunit
Chordopox_RPO7	PF05864.7	gi|479326300|ref|YP_007866355.1|	-	0.038	14.0	0.1	0.061	13.4	0.1	1.4	1	1	0	1	1	1	0	Chordopoxvirus	DNA-directed	RNA	polymerase	7	kDa	polypeptide	(RPO7)
Ribosomal_S2	PF00318.15	gi|479326301|ref|YP_007866356.1|	-	1.2e-39	135.7	0.0	1.1e-20	73.8	0.0	2.1	1	1	1	2	2	2	2	Ribosomal	protein	S2
Memo	PF01875.12	gi|479326302|ref|YP_007866357.1|	-	7.2e-97	323.5	0.1	8.2e-97	323.3	0.1	1.0	1	0	0	1	1	1	1	Memo-like	protein
LigB	PF02900.13	gi|479326302|ref|YP_007866357.1|	-	0.0058	15.6	0.0	0.02	13.8	0.0	1.7	1	1	0	1	1	1	1	Catalytic	LigB	subunit	of	aromatic	ring-opening	dioxygenase
AA_kinase	PF00696.23	gi|479326304|ref|YP_007866359.1|	-	6.5e-22	78.2	0.0	8.9e-22	77.8	0.0	1.1	1	0	0	1	1	1	1	Amino	acid	kinase	family
GATase_5	PF13507.1	gi|479326304|ref|YP_007866359.1|	-	0.14	11.0	0.0	0.45	9.3	0.0	1.7	2	0	0	2	2	2	0	CobB/CobQ-like	glutamine	amidotransferase	domain
FMN_dh	PF01070.13	gi|479326305|ref|YP_007866360.1|	-	7.6e-28	97.3	0.0	7.6e-21	74.3	0.0	2.1	1	1	1	2	2	2	2	FMN-dependent	dehydrogenase
IMPDH	PF00478.20	gi|479326305|ref|YP_007866360.1|	-	0.00024	20.1	1.8	0.049	12.5	0.2	2.7	2	1	1	3	3	3	2	IMP	dehydrogenase	/	GMP	reductase	domain
PcrB	PF01884.12	gi|479326305|ref|YP_007866360.1|	-	0.0019	17.4	2.0	0.063	12.5	0.0	3.6	4	1	1	5	5	5	1	PcrB	family
Glu_synthase	PF01645.12	gi|479326305|ref|YP_007866360.1|	-	0.017	14.0	0.1	0.034	13.0	0.1	1.5	1	0	0	1	1	1	0	Conserved	region	in	glutamate	synthase
DHO_dh	PF01180.16	gi|479326305|ref|YP_007866360.1|	-	0.095	11.6	0.9	0.59	9.0	0.1	2.4	2	1	0	2	2	2	0	Dihydroorotate	dehydrogenase
polyprenyl_synt	PF00348.12	gi|479326306|ref|YP_007866361.1|	-	1.1e-73	247.3	0.1	1.3e-73	247.0	0.1	1.1	1	0	0	1	1	1	1	Polyprenyl	synthetase
UPF0239	PF06783.6	gi|479326306|ref|YP_007866361.1|	-	0.017	15.0	0.0	0.033	14.0	0.0	1.5	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0239)
RPW8	PF05659.6	gi|479326306|ref|YP_007866361.1|	-	0.045	13.2	0.2	0.086	12.3	0.2	1.5	1	0	0	1	1	1	0	Arabidopsis	broad-spectrum	mildew	resistance	protein	RPW8
Glycos_transf_4	PF00953.16	gi|479326307|ref|YP_007866362.1|	-	2.4e-34	118.4	19.2	2.4e-34	118.4	13.3	2.1	3	0	0	3	3	3	1	Glycosyl	transferase	family	4
MNSV_P7B	PF06692.6	gi|479326307|ref|YP_007866362.1|	-	7.1	6.4	8.5	10	5.9	2.6	2.7	2	0	0	2	2	2	0	Melon	necrotic	spot	virus	P7B	protein
PaREP1	PF05942.6	gi|479326309|ref|YP_007866364.1|	-	0.022	14.6	0.0	0.055	13.3	0.0	1.7	1	1	0	1	1	1	0	Archaeal	PaREP1/PaREP8	family
VASP_tetra	PF08776.6	gi|479326309|ref|YP_007866364.1|	-	0.12	11.7	0.7	0.74	9.1	0.0	2.5	2	0	0	2	2	2	0	VASP	tetramerisation	domain
DUF1614	PF07758.6	gi|479326310|ref|YP_007866365.1|	-	4.4e-48	163.3	11.8	5.9e-48	162.9	8.2	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1614)
NTP_transf_3	PF12804.2	gi|479326311|ref|YP_007866366.1|	-	3.5e-12	46.6	0.0	5.6e-12	46.0	0.0	1.3	1	1	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.14	gi|479326311|ref|YP_007866366.1|	-	0.01	15.3	0.0	0.013	14.9	0.0	1.1	1	0	0	1	1	1	0	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
NTP_transferase	PF00483.18	gi|479326311|ref|YP_007866366.1|	-	0.13	11.5	0.0	0.24	10.6	0.0	1.5	1	0	0	1	1	1	0	Nucleotidyl	transferase
AIRS_C	PF02769.17	gi|479326312|ref|YP_007866367.1|	-	1.2e-15	57.8	0.3	1.9e-15	57.2	0.2	1.3	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|479326312|ref|YP_007866367.1|	-	1.1e-11	44.8	0.6	4e-11	43.0	0.1	2.2	3	0	0	3	3	3	1	AIR	synthase	related	protein,	N-terminal	domain
ABC_tran	PF00005.22	gi|479326313|ref|YP_007866368.1|	-	6.8e-29	100.9	0.0	1.2e-28	100.1	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|479326313|ref|YP_007866368.1|	-	4.1e-17	63.0	0.0	2.6e-12	47.2	0.0	2.2	1	1	1	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|479326313|ref|YP_007866368.1|	-	4e-08	32.7	0.1	7.7e-06	25.2	0.0	2.4	1	1	1	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|479326313|ref|YP_007866368.1|	-	0.0002	20.6	0.1	0.33	10.1	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|479326313|ref|YP_007866368.1|	-	0.011	15.2	0.0	0.022	14.2	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_10	PF12846.2	gi|479326313|ref|YP_007866368.1|	-	0.011	15.1	0.1	1.1	8.6	0.0	2.1	1	1	1	2	2	2	0	AAA-like	domain
AAA_23	PF13476.1	gi|479326313|ref|YP_007866368.1|	-	0.011	16.0	2.8	0.034	14.4	2.0	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_14	PF13173.1	gi|479326313|ref|YP_007866368.1|	-	0.034	14.0	0.3	9.8	6.1	0.0	2.6	2	1	0	2	2	2	0	AAA	domain
AAA	PF00004.24	gi|479326313|ref|YP_007866368.1|	-	0.041	14.0	0.4	0.22	11.7	0.3	2.4	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.1	gi|479326313|ref|YP_007866368.1|	-	0.049	13.7	0.3	0.31	11.1	0.2	2.4	1	1	0	1	1	1	0	AAA	domain
Rad17	PF03215.10	gi|479326313|ref|YP_007866368.1|	-	0.05	12.2	0.0	0.071	11.7	0.0	1.2	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
AAA_30	PF13604.1	gi|479326313|ref|YP_007866368.1|	-	0.053	13.1	0.0	0.12	11.9	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
SRP54	PF00448.17	gi|479326313|ref|YP_007866368.1|	-	0.063	12.7	0.0	0.1	12.0	0.0	1.3	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
UPF0079	PF02367.12	gi|479326313|ref|YP_007866368.1|	-	0.066	12.8	0.0	0.12	11.9	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
SbcCD_C	PF13558.1	gi|479326313|ref|YP_007866368.1|	-	0.11	12.4	0.0	0.41	10.6	0.0	2.0	2	0	0	2	2	2	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_19	PF13245.1	gi|479326313|ref|YP_007866368.1|	-	0.14	11.9	0.1	0.3	10.8	0.1	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
ABC2_membrane_3	PF12698.2	gi|479326314|ref|YP_007866369.1|	-	4.8e-16	58.7	38.4	6.7e-16	58.2	26.6	1.1	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane	PF01061.19	gi|479326314|ref|YP_007866369.1|	-	4.6e-11	42.2	34.9	2.5e-09	36.6	14.7	2.7	2	1	0	2	2	2	2	ABC-2	type	transporter
ECH	PF00378.15	gi|479326315|ref|YP_007866370.1|	-	5.4e-26	91.2	0.0	6.7e-26	90.9	0.0	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
PadR	PF03551.9	gi|479326316|ref|YP_007866371.1|	-	1.4e-18	66.4	0.1	2.8e-18	65.4	0.0	1.5	2	0	0	2	2	2	1	Transcriptional	regulator	PadR-like	family
DUF505	PF04458.7	gi|479326316|ref|YP_007866371.1|	-	0.00024	19.3	0.5	0.0013	16.9	0.0	1.8	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF505)
DUF4364	PF14277.1	gi|479326316|ref|YP_007866371.1|	-	0.00035	20.2	0.2	0.00087	18.9	0.1	1.7	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
HTH_27	PF13463.1	gi|479326316|ref|YP_007866371.1|	-	0.001	19.3	0.1	0.0096	16.2	0.0	2.4	2	1	0	2	2	2	1	Winged	helix	DNA-binding	domain
HxlR	PF01638.12	gi|479326316|ref|YP_007866371.1|	-	0.0036	16.8	0.0	0.012	15.2	0.0	1.9	1	1	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_42	PF06224.7	gi|479326316|ref|YP_007866371.1|	-	0.0047	16.3	0.0	0.005	16.2	0.0	1.1	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|479326316|ref|YP_007866371.1|	-	0.014	15.1	0.3	0.22	11.2	0.0	2.8	2	2	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_32	PF13565.1	gi|479326316|ref|YP_007866371.1|	-	0.019	15.7	0.1	0.97	10.2	0.0	2.2	2	0	0	2	2	2	0	Homeodomain-like	domain
FUR	PF01475.14	gi|479326316|ref|YP_007866371.1|	-	0.021	14.7	0.0	0.027	14.3	0.0	1.4	1	1	0	1	1	1	0	Ferric	uptake	regulator	family
HTH_5	PF01022.15	gi|479326316|ref|YP_007866371.1|	-	0.042	13.5	0.0	0.48	10.1	0.0	2.5	3	1	1	4	4	4	0	Bacterial	regulatory	protein,	arsR	family
DUF1495	PF07381.6	gi|479326316|ref|YP_007866371.1|	-	0.058	13.0	0.0	0.12	12.0	0.0	1.5	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain	(DUF1495)
HTH_45	PF14947.1	gi|479326316|ref|YP_007866371.1|	-	0.081	12.7	0.1	0.36	10.6	0.0	2.0	2	0	0	2	2	2	0	Winged	helix-turn-helix
HisG_C	PF08029.6	gi|479326316|ref|YP_007866371.1|	-	0.12	12.3	0.3	0.48	10.3	0.0	2.2	2	1	0	2	2	2	0	HisG,	C-terminal	domain
CCDC-167	PF15188.1	gi|479326316|ref|YP_007866371.1|	-	0.52	10.2	3.3	4.2	7.3	2.0	2.2	1	1	1	2	2	2	0	Coiled-coil	domain-containing	protein	167
TrmB	PF01978.14	gi|479326317|ref|YP_007866372.1|	-	9.7e-15	54.0	0.1	1.4e-14	53.5	0.1	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|479326317|ref|YP_007866372.1|	-	5.6e-08	32.3	0.0	9e-08	31.6	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_5	PF01022.15	gi|479326317|ref|YP_007866372.1|	-	5.9e-06	25.8	0.6	1.5e-05	24.5	0.1	1.9	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
MarR	PF01047.17	gi|479326317|ref|YP_007866372.1|	-	3.4e-05	23.4	0.1	5.9e-05	22.6	0.1	1.4	1	0	0	1	1	1	1	MarR	family
HTH_20	PF12840.2	gi|479326317|ref|YP_007866372.1|	-	0.00018	21.2	0.1	0.00034	20.3	0.1	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_27	PF13463.1	gi|479326317|ref|YP_007866372.1|	-	0.00047	20.4	0.0	0.00083	19.6	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
TFIIE_alpha	PF02002.12	gi|479326317|ref|YP_007866372.1|	-	0.00089	18.7	0.1	0.0013	18.2	0.1	1.3	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HTH_24	PF13412.1	gi|479326317|ref|YP_007866372.1|	-	0.0019	17.5	0.3	0.0036	16.6	0.2	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
Fe_dep_repress	PF01325.14	gi|479326317|ref|YP_007866372.1|	-	0.0076	16.1	0.1	0.014	15.2	0.1	1.6	1	1	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DUF4423	PF14394.1	gi|479326317|ref|YP_007866372.1|	-	0.01	15.3	0.2	0.018	14.5	0.0	1.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4423)
z-alpha	PF02295.12	gi|479326317|ref|YP_007866372.1|	-	0.04	13.6	0.0	0.066	12.9	0.0	1.4	1	0	0	1	1	1	0	Adenosine	deaminase	z-alpha	domain
HTH_36	PF13730.1	gi|479326317|ref|YP_007866372.1|	-	0.041	14.0	0.1	0.079	13.1	0.1	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
HxlR	PF01638.12	gi|479326317|ref|YP_007866372.1|	-	0.11	12.1	0.1	0.16	11.6	0.1	1.3	1	1	0	1	1	1	0	HxlR-like	helix-turn-helix
GntR	PF00392.16	gi|479326317|ref|YP_007866372.1|	-	0.12	11.8	0.0	0.2	11.0	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
HTH_34	PF13601.1	gi|479326317|ref|YP_007866372.1|	-	0.13	12.3	0.1	0.22	11.5	0.0	1.4	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
Replic_Relax	PF13814.1	gi|479326317|ref|YP_007866372.1|	-	0.13	12.1	0.0	0.17	11.7	0.0	1.2	1	0	0	1	1	1	0	Replication-relaxation
DUF2250	PF10007.4	gi|479326317|ref|YP_007866372.1|	-	0.13	12.1	0.3	0.25	11.2	0.1	1.5	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Antitoxin-MazE	PF04014.13	gi|479326318|ref|YP_007866373.1|	-	6e-11	41.8	0.1	6.4e-11	41.7	0.1	1.1	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
eIF-1a	PF01176.14	gi|479326318|ref|YP_007866373.1|	-	3.7e-05	23.0	0.1	6.5e-05	22.2	0.0	1.4	1	1	0	1	1	1	1	Translation	initiation	factor	1A	/	IF-1
DUF1905	PF08922.6	gi|479326318|ref|YP_007866373.1|	-	0.034	13.7	0.1	0.046	13.3	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1905)
TatD_DNase	PF01026.16	gi|479326319|ref|YP_007866374.1|	-	1.7e-52	178.1	0.0	2e-52	177.9	0.0	1.0	1	0	0	1	1	1	1	TatD	related	DNase
DXP_synthase_N	PF13292.1	gi|479326319|ref|YP_007866374.1|	-	0.054	12.4	0.0	0.084	11.7	0.0	1.3	1	0	0	1	1	1	0	1-deoxy-D-xylulose-5-phosphate	synthase
NADH5_C	PF06455.6	gi|479326320|ref|YP_007866375.1|	-	0.6	9.4	5.6	0.67	9.3	3.9	1.1	1	0	0	1	1	1	0	NADH	dehydrogenase	subunit	5	C-terminus
ATP_synt_I	PF03899.10	gi|479326321|ref|YP_007866376.1|	-	0.017	15.2	3.1	0.022	14.8	2.2	1.2	1	0	0	1	1	1	0	ATP	synthase	I	chain
Polysacc_synt_C	PF14667.1	gi|479326321|ref|YP_007866376.1|	-	1.6	8.5	7.5	1.8	8.3	5.2	1.0	1	0	0	1	1	1	0	Polysaccharide	biosynthesis	C-terminal	domain
COX1	PF00115.15	gi|479326323|ref|YP_007866378.1|	-	1.3e-54	185.5	63.6	1.3e-54	185.5	44.1	2.8	1	1	2	3	3	3	2	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
Aldolase_2	PF10120.4	gi|479326324|ref|YP_007866379.1|	-	9.5e-59	197.5	0.1	1.1e-58	197.3	0.0	1.0	1	0	0	1	1	1	1	Putative	aldolase
PadR	PF03551.9	gi|479326325|ref|YP_007866380.1|	-	8.9e-14	51.0	0.2	1.8e-13	50.0	0.1	1.5	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_45	PF14947.1	gi|479326325|ref|YP_007866380.1|	-	7.2e-05	22.5	1.1	0.0002	21.0	0.3	2.0	2	0	0	2	2	2	1	Winged	helix-turn-helix
TrmB	PF01978.14	gi|479326325|ref|YP_007866380.1|	-	0.0002	20.9	1.0	0.014	15.0	0.1	2.7	3	0	0	3	3	3	1	Sugar-specific	transcriptional	regulator	TrmB
DUF4364	PF14277.1	gi|479326325|ref|YP_007866380.1|	-	0.00029	20.4	1.0	0.00052	19.6	0.5	1.7	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4364)
HTH_27	PF13463.1	gi|479326325|ref|YP_007866380.1|	-	0.0011	19.2	0.0	0.0024	18.1	0.0	1.6	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
DUF505	PF04458.7	gi|479326325|ref|YP_007866380.1|	-	0.0097	14.0	0.3	0.0097	14.0	0.2	1.4	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF505)
Penicillinase_R	PF03965.11	gi|479326325|ref|YP_007866380.1|	-	0.014	15.4	0.1	0.042	13.9	0.1	1.9	1	1	0	1	1	1	0	Penicillinase	repressor
DUF1495	PF07381.6	gi|479326325|ref|YP_007866380.1|	-	0.034	13.8	0.3	0.18	11.5	0.0	2.1	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain	(DUF1495)
DUF3942	PF13078.1	gi|479326325|ref|YP_007866380.1|	-	0.05	13.7	2.4	0.04	14.0	0.7	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3942)
Tox-REase-7	PF15649.1	gi|479326325|ref|YP_007866380.1|	-	0.062	13.4	1.4	0.084	13.0	0.9	1.4	1	1	0	1	1	1	0	Restriction	endonuclease	fold	toxin	7
Hydrolase_6	PF13344.1	gi|479326325|ref|YP_007866380.1|	-	0.12	12.3	0.4	0.59	10.0	0.3	1.9	1	1	0	1	1	1	0	Haloacid	dehalogenase-like	hydrolase
DUF4116	PF13475.1	gi|479326328|ref|YP_007866383.1|	-	0.39	10.2	4.7	4.7	6.7	0.1	3.1	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4116)
CbiA	PF01656.18	gi|479326330|ref|YP_007866385.1|	-	1.3e-26	93.2	0.1	1.6e-26	92.9	0.0	1.1	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
MipZ	PF09140.6	gi|479326330|ref|YP_007866385.1|	-	2e-13	50.0	0.0	2.4e-13	49.7	0.0	1.1	1	0	0	1	1	1	1	ATPase	MipZ
AAA_31	PF13614.1	gi|479326330|ref|YP_007866385.1|	-	1.2e-11	44.7	0.0	1.6e-05	24.8	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
ArsA_ATPase	PF02374.10	gi|479326330|ref|YP_007866385.1|	-	2.6e-06	26.6	0.8	0.0002	20.5	0.1	2.3	1	1	1	2	2	2	2	Anion-transporting	ATPase
ParA	PF10609.4	gi|479326330|ref|YP_007866385.1|	-	0.0023	17.8	0.0	0.004	16.9	0.0	1.4	1	0	0	1	1	1	1	ParA/MinD	ATPase	like
Fer4_NifH	PF00142.13	gi|479326330|ref|YP_007866385.1|	-	0.023	13.9	0.1	0.059	12.5	0.1	1.7	2	0	0	2	2	2	0	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
SRP54	PF00448.17	gi|479326330|ref|YP_007866385.1|	-	0.12	11.8	0.2	0.48	9.8	0.1	1.9	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
SMP_2	PF10144.4	gi|479326331|ref|YP_007866386.1|	-	0.016	14.3	0.0	0.023	13.7	0.0	1.2	1	0	0	1	1	1	0	Bacterial	virulence	factor	haemolysin
Calpain_III	PF01067.17	gi|479326332|ref|YP_007866387.1|	-	0.042	13.5	0.1	0.071	12.7	0.0	1.4	1	0	0	1	1	1	0	Calpain	large	subunit,	domain	III
CN_hydrolase	PF00795.17	gi|479326333|ref|YP_007866388.1|	-	3.6e-12	46.0	0.0	7.5e-11	41.7	0.0	2.1	1	1	0	1	1	1	1	Carbon-nitrogen	hydrolase
CBS	PF00571.23	gi|479326334|ref|YP_007866389.1|	-	5.2e-43	144.5	1.6	5e-10	39.0	0.0	4.3	4	0	0	4	4	4	4	CBS	domain
Ribosomal_S30AE	PF02482.14	gi|479326334|ref|YP_007866389.1|	-	0.00013	22.3	1.3	0.00013	22.3	0.9	2.0	3	0	0	3	3	3	1	Sigma	54	modulation	protein	/	S30EA	ribosomal	protein
Hist_deacetyl	PF00850.14	gi|479326335|ref|YP_007866390.1|	-	3.1e-74	250.0	0.0	3.5e-74	249.8	0.0	1.1	1	0	0	1	1	1	1	Histone	deacetylase	domain
ATP-grasp	PF02222.17	gi|479326336|ref|YP_007866391.1|	-	1.8e-42	144.5	0.0	3.7e-42	143.6	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|479326336|ref|YP_007866391.1|	-	1.7e-20	73.5	0.1	3.1e-20	72.6	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
Dala_Dala_lig_C	PF07478.8	gi|479326336|ref|YP_007866391.1|	-	2.6e-10	40.0	0.2	6e-10	38.8	0.0	1.6	2	0	0	2	2	2	1	D-ala	D-ala	ligase	C-terminus
CPSase_L_D2	PF02786.12	gi|479326336|ref|YP_007866391.1|	-	6.7e-10	38.6	0.0	1.3e-09	37.6	0.0	1.5	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
ATP-grasp_3	PF02655.9	gi|479326336|ref|YP_007866391.1|	-	4.2e-08	33.2	0.0	7.1e-08	32.4	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
RimK	PF08443.6	gi|479326336|ref|YP_007866391.1|	-	2.2e-06	27.3	0.0	1.2e-05	24.8	0.0	2.2	2	1	0	2	2	2	1	RimK-like	ATP-grasp	domain
GARS_A	PF01071.14	gi|479326336|ref|YP_007866391.1|	-	0.00014	21.4	0.0	0.00035	20.1	0.0	1.7	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
CPSase_L_chain	PF00289.17	gi|479326336|ref|YP_007866391.1|	-	0.0013	18.7	0.2	0.0026	17.8	0.1	1.6	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
2-Hacid_dh_C	PF02826.14	gi|479326336|ref|YP_007866391.1|	-	0.0014	17.7	0.0	0.0027	16.8	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
RmlD_sub_bind	PF04321.12	gi|479326336|ref|YP_007866391.1|	-	0.0046	15.9	0.0	0.0082	15.0	0.0	1.4	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
3HCDH_N	PF02737.13	gi|479326336|ref|YP_007866391.1|	-	0.017	14.8	0.1	0.032	13.9	0.1	1.4	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_2	PF03446.10	gi|479326336|ref|YP_007866391.1|	-	0.032	14.0	0.2	0.075	12.8	0.1	1.7	1	1	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Pyr_redox	PF00070.22	gi|479326336|ref|YP_007866391.1|	-	0.036	14.4	1.1	0.44	10.9	0.1	2.8	2	1	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
GARS_N	PF02844.10	gi|479326336|ref|YP_007866391.1|	-	0.074	13.5	0.3	0.18	12.3	0.2	1.6	1	0	0	1	1	1	0	Phosphoribosylglycinamide	synthetase,	N	domain
PDDEXK_3	PF13366.1	gi|479326337|ref|YP_007866392.1|	-	0.0016	18.4	0.0	0.0024	17.8	0.0	1.3	1	0	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
McrBC	PF10117.4	gi|479326337|ref|YP_007866392.1|	-	0.013	14.4	0.2	0.017	14.0	0.1	1.1	1	0	0	1	1	1	0	McrBC	5-methylcytosine	restriction	system	component
RE_NgoPII	PF09521.5	gi|479326337|ref|YP_007866392.1|	-	0.057	12.1	0.1	0.11	11.2	0.0	1.5	2	0	0	2	2	2	0	NgoPII	restriction	endonuclease
TA0956	PF11513.3	gi|479326339|ref|YP_007866394.1|	-	0.14	12.2	1.9	0.52	10.3	0.6	2.1	2	0	0	2	2	2	0	Thermoplasma	acidophilum	protein	TA0956
DAO	PF01266.19	gi|479326341|ref|YP_007866396.1|	-	3.2e-14	52.6	0.0	1.2e-07	30.9	0.0	2.2	1	1	0	2	2	2	2	FAD	dependent	oxidoreductase
3HCDH_N	PF02737.13	gi|479326341|ref|YP_007866396.1|	-	0.0059	16.2	0.0	0.0095	15.5	0.0	1.3	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
FAD_binding_3	PF01494.14	gi|479326341|ref|YP_007866396.1|	-	0.0076	15.3	0.0	0.011	14.8	0.0	1.1	1	0	0	1	1	1	1	FAD	binding	domain
NAD_binding_7	PF13241.1	gi|479326341|ref|YP_007866396.1|	-	0.0079	16.4	0.0	0.015	15.5	0.0	1.6	1	0	0	1	1	1	1	Putative	NAD(P)-binding
NAD_binding_8	PF13450.1	gi|479326341|ref|YP_007866396.1|	-	0.0084	16.1	0.0	0.016	15.2	0.0	1.4	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
TrkA_N	PF02254.13	gi|479326341|ref|YP_007866396.1|	-	0.016	15.2	0.0	0.036	14.0	0.0	1.6	1	0	0	1	1	1	0	TrkA-N	domain
ApbA	PF02558.11	gi|479326341|ref|YP_007866396.1|	-	0.034	13.5	0.0	0.056	12.8	0.0	1.3	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
NAD_Gly3P_dh_N	PF01210.18	gi|479326341|ref|YP_007866396.1|	-	0.039	13.6	0.0	0.077	12.7	0.0	1.5	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
AlaDh_PNT_C	PF01262.16	gi|479326341|ref|YP_007866396.1|	-	0.041	13.4	0.0	0.067	12.7	0.0	1.3	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
Pyr_redox_2	PF07992.9	gi|479326341|ref|YP_007866396.1|	-	0.049	13.4	0.0	0.094	12.5	0.0	1.6	1	1	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
2-Hacid_dh_C	PF02826.14	gi|479326341|ref|YP_007866396.1|	-	0.059	12.5	0.0	0.12	11.4	0.0	1.5	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
XdhC_C	PF13478.1	gi|479326341|ref|YP_007866396.1|	-	0.14	12.4	0.0	0.23	11.7	0.0	1.3	1	0	0	1	1	1	0	XdhC	Rossmann	domain
Ole-e-6	PF09253.5	gi|479326342|ref|YP_007866397.1|	-	0.15	11.7	0.0	0.36	10.4	0.0	1.6	1	0	0	1	1	1	0	Pollen	allergen	ole	e	6
MoCF_biosynth	PF00994.19	gi|479326343|ref|YP_007866398.1|	-	7.9e-30	103.1	0.1	9.1e-30	102.9	0.0	1.0	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
B12-binding	PF02310.14	gi|479326343|ref|YP_007866398.1|	-	0.078	12.8	0.0	0.11	12.3	0.0	1.3	1	0	0	1	1	1	0	B12	binding	domain
Fer4_8	PF13183.1	gi|479326344|ref|YP_007866399.1|	-	3.2e-10	39.8	4.2	5.9e-10	39.0	2.9	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|479326344|ref|YP_007866399.1|	-	5.1e-09	36.3	4.7	1.5e-08	34.8	3.2	1.9	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|479326344|ref|YP_007866399.1|	-	1.9e-08	34.4	6.3	4.3e-08	33.2	4.3	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|479326344|ref|YP_007866399.1|	-	2.1e-08	34.4	5.8	4.2e-08	33.4	4.0	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|479326344|ref|YP_007866399.1|	-	8.4e-08	31.8	7.2	2.7e-07	30.2	5.1	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|479326344|ref|YP_007866399.1|	-	8.5e-08	31.4	15.2	0.00082	18.8	3.4	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|479326344|ref|YP_007866399.1|	-	8.9e-08	32.4	2.3	0.0053	17.1	0.1	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|479326344|ref|YP_007866399.1|	-	9.5e-07	28.3	10.6	0.0033	17.2	1.6	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|479326344|ref|YP_007866399.1|	-	5.3e-06	26.0	12.9	0.0029	17.4	2.2	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|479326344|ref|YP_007866399.1|	-	1.4e-05	25.2	18.0	0.015	15.7	3.4	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|479326344|ref|YP_007866399.1|	-	2e-05	24.5	11.1	0.0034	17.5	1.8	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|479326344|ref|YP_007866399.1|	-	0.00015	21.5	8.0	0.00036	20.3	5.5	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|479326344|ref|YP_007866399.1|	-	0.00031	21.2	2.8	0.45	11.1	0.0	2.5	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_16	PF13484.1	gi|479326344|ref|YP_007866399.1|	-	0.00063	20.4	9.5	0.0047	17.6	6.7	2.2	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_13	PF13370.1	gi|479326344|ref|YP_007866399.1|	-	0.0042	17.4	4.1	1.3	9.5	0.0	2.5	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_20	PF14691.1	gi|479326344|ref|YP_007866399.1|	-	0.15	11.6	1.9	0.62	9.7	0.1	2.2	2	0	0	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
DEAD	PF00270.24	gi|479326346|ref|YP_007866401.1|	-	2.1e-24	85.9	0.0	5.5e-24	84.5	0.0	1.7	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|479326346|ref|YP_007866401.1|	-	1e-17	63.7	0.0	9e-16	57.5	0.0	2.6	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
DUF1998	PF09369.5	gi|479326346|ref|YP_007866401.1|	-	8e-15	55.1	0.2	2.5e-14	53.6	0.1	1.9	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1998)
ResIII	PF04851.10	gi|479326346|ref|YP_007866401.1|	-	4.2e-07	29.9	0.1	1.5e-06	28.1	0.0	1.9	2	1	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
SecA_DEAD	PF07517.9	gi|479326346|ref|YP_007866401.1|	-	0.00059	19.2	0.0	0.0012	18.2	0.0	1.4	1	0	0	1	1	1	1	SecA	DEAD-like	domain
DUF460	PF04312.8	gi|479326346|ref|YP_007866401.1|	-	0.0017	17.8	0.0	0.0065	16.0	0.0	1.9	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF460)
AAA_19	PF13245.1	gi|479326346|ref|YP_007866401.1|	-	0.0059	16.3	0.0	0.041	13.6	0.0	2.4	2	0	0	2	2	2	1	Part	of	AAA	domain
Oxidored-like	PF09791.4	gi|479326346|ref|YP_007866401.1|	-	0.091	12.2	3.0	0.24	10.8	2.1	1.7	1	0	0	1	1	1	0	Oxidoreductase-like	protein,	N-terminal
Pox_polyA_pol_N	PF12630.2	gi|479326347|ref|YP_007866402.1|	-	0.1	12.6	0.0	0.14	12.2	0.0	1.2	1	0	0	1	1	1	0	Poxvirus	poly(A)	polymerase	N-terminal	domain
QueC	PF06508.8	gi|479326348|ref|YP_007866403.1|	-	4.3e-59	199.3	0.0	6.4e-59	198.7	0.0	1.3	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
GATase_7	PF13537.1	gi|479326348|ref|YP_007866403.1|	-	1.5e-15	56.9	0.0	3.5e-15	55.8	0.0	1.6	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_6	PF13522.1	gi|479326348|ref|YP_007866403.1|	-	7e-13	48.6	0.0	1.5e-12	47.6	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
ThiI	PF02568.9	gi|479326348|ref|YP_007866403.1|	-	2.1e-10	40.4	0.0	9.8e-10	38.2	0.0	2.1	1	1	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
tRNA_Me_trans	PF03054.11	gi|479326348|ref|YP_007866403.1|	-	6.7e-07	28.1	0.0	2.1e-06	26.5	0.0	1.8	2	0	0	2	2	2	1	tRNA	methyl	transferase
Asn_synthase	PF00733.16	gi|479326348|ref|YP_007866403.1|	-	9.7e-06	25.2	0.0	1.9e-05	24.2	0.0	1.4	1	0	0	1	1	1	1	Asparagine	synthase
ATP_bind_3	PF01171.15	gi|479326348|ref|YP_007866403.1|	-	7.3e-05	22.3	0.0	0.00012	21.6	0.0	1.3	1	0	0	1	1	1	1	PP-loop	family
GATase_2	PF00310.16	gi|479326348|ref|YP_007866403.1|	-	0.00068	18.4	0.0	0.6	8.7	0.0	2.6	2	1	1	3	3	3	2	Glutamine	amidotransferases	class-II
NAD_synthase	PF02540.12	gi|479326348|ref|YP_007866403.1|	-	0.0032	16.3	0.1	0.031	13.1	0.0	2.1	2	0	0	2	2	2	1	NAD	synthase
FeoB_N	PF02421.13	gi|479326348|ref|YP_007866403.1|	-	0.02	14.1	0.1	0.035	13.3	0.1	1.3	1	0	0	1	1	1	0	Ferrous	iron	transport	protein	B
DUF4174	PF13778.1	gi|479326348|ref|YP_007866403.1|	-	0.057	13.5	0.1	0.26	11.3	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4174)
TauE	PF01925.14	gi|479326349|ref|YP_007866404.1|	-	3.6e-38	131.3	28.7	4.3e-38	131.1	19.9	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
Luteo_coat	PF00894.13	gi|479326349|ref|YP_007866404.1|	-	0.12	12.1	0.2	0.19	11.5	0.2	1.2	1	0	0	1	1	1	0	Luteovirus	coat	protein
DUF1634	PF07843.6	gi|479326350|ref|YP_007866405.1|	-	4.7e-32	109.7	9.1	5.6e-32	109.5	6.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1634)
DUF4097	PF13349.1	gi|479326350|ref|YP_007866405.1|	-	0.018	14.6	2.7	0.036	13.5	1.9	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4097)
DUF2910	PF11139.3	gi|479326350|ref|YP_007866405.1|	-	0.79	8.8	5.0	0.73	8.9	1.7	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2910)
DoxX_3	PF13781.1	gi|479326350|ref|YP_007866405.1|	-	3.5	8.0	7.2	1.5	9.2	1.4	2.1	1	1	1	2	2	2	0	DoxX-like	family
Act-Frag_cataly	PF09192.5	gi|479326351|ref|YP_007866406.1|	-	5.2e-05	22.3	0.5	0.00044	19.3	0.0	2.0	2	0	0	2	2	2	2	Actin-fragmin	kinase,	catalytic
TrmB	PF01978.14	gi|479326352|ref|YP_007866407.1|	-	0.03	14.0	0.0	0.035	13.8	0.0	1.2	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
Rio2_N	PF09202.6	gi|479326352|ref|YP_007866407.1|	-	0.04	13.9	0.0	0.044	13.8	0.0	1.0	1	0	0	1	1	1	0	Rio2,	N-terminal
Stork_head	PF10264.4	gi|479326352|ref|YP_007866407.1|	-	0.045	13.9	0.0	0.075	13.2	0.0	1.3	1	1	0	1	1	1	0	Winged	helix	Storkhead-box1	domain
UPF0126	PF03458.8	gi|479326353|ref|YP_007866408.1|	-	6.2e-44	147.5	13.2	5.8e-23	80.3	3.6	2.1	2	0	0	2	2	2	2	UPF0126	domain
TRIC	PF05197.8	gi|479326353|ref|YP_007866408.1|	-	0.00031	20.2	3.6	0.0021	17.5	2.5	2.0	1	1	0	1	1	1	1	TRIC	channel
NPCBM_assoc	PF10633.4	gi|479326354|ref|YP_007866409.1|	-	2.6e-10	40.2	23.8	0.0038	17.2	0.0	8.3	9	1	1	10	10	10	5	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
CARDB	PF07705.6	gi|479326354|ref|YP_007866409.1|	-	0.0037	17.2	1.9	0.0037	17.2	1.4	7.7	7	1	0	8	8	8	3	CARDB
Rifin_STEVOR	PF02009.11	gi|479326354|ref|YP_007866409.1|	-	0.1	12.2	5.2	0.15	11.6	3.6	1.2	1	0	0	1	1	1	0	Rifin/stevor	family
Transglut_C	PF00927.17	gi|479326354|ref|YP_007866409.1|	-	0.17	11.9	6.4	4.1	7.4	0.1	4.2	4	1	1	5	5	5	0	Transglutaminase	family,	C-terminal	ig	like	domain
Peptidase_M24	PF00557.19	gi|479326355|ref|YP_007866410.1|	-	6.5e-56	189.1	0.1	8.2e-56	188.8	0.1	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.13	gi|479326355|ref|YP_007866410.1|	-	1.7e-17	64.1	0.0	3.2e-17	63.2	0.0	1.4	1	0	0	1	1	1	1	Creatinase/Prolidase	N-terminal	domain
Hist_deacetyl	PF00850.14	gi|479326356|ref|YP_007866411.1|	-	6.4e-62	209.6	0.0	8.7e-62	209.1	0.0	1.0	1	0	0	1	1	1	1	Histone	deacetylase	domain
DUF1374	PF07118.6	gi|479326356|ref|YP_007866411.1|	-	5.8	7.0	7.3	0.26	11.4	0.2	2.4	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1374)
GATase_6	PF13522.1	gi|479326357|ref|YP_007866412.1|	-	2.7e-08	33.8	0.0	5.8e-08	32.7	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_4	PF13230.1	gi|479326357|ref|YP_007866412.1|	-	0.00019	20.2	0.0	0.00026	19.7	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
Lactamase_B_2	PF12706.2	gi|479326358|ref|YP_007866413.1|	-	7.1e-19	68.1	0.4	8.8e-19	67.8	0.2	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|479326358|ref|YP_007866413.1|	-	2.8e-09	36.8	0.1	8e-09	35.4	0.1	1.6	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_3	PF13483.1	gi|479326358|ref|YP_007866413.1|	-	0.023	14.4	0.0	0.04	13.6	0.0	1.4	1	1	0	1	1	1	0	Beta-lactamase	superfamily	domain
PfkB	PF00294.19	gi|479326359|ref|YP_007866414.1|	-	1.3e-57	195.2	2.0	1.7e-57	194.8	1.4	1.1	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Phos_pyr_kin	PF08543.7	gi|479326359|ref|YP_007866414.1|	-	2e-10	40.2	0.0	3.4e-10	39.5	0.0	1.3	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
Phos_pyr_kin	PF08543.7	gi|479326360|ref|YP_007866415.1|	-	4.8e-77	258.4	0.1	6.1e-77	258.1	0.1	1.1	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
PfkB	PF00294.19	gi|479326360|ref|YP_007866415.1|	-	2e-13	50.1	0.0	4.3e-13	49.0	0.0	1.5	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Carb_kinase	PF01256.12	gi|479326360|ref|YP_007866415.1|	-	7.1e-08	32.0	0.0	1.3e-07	31.1	0.0	1.4	1	0	0	1	1	1	1	Carbohydrate	kinase
HK97-gp10_like	PF04883.7	gi|479326360|ref|YP_007866415.1|	-	0.011	16.6	0.4	0.036	14.9	0.1	2.0	2	1	0	2	2	2	0	Bacteriophage	HK97-gp10,	putative	tail-component
YebG	PF07130.7	gi|479326360|ref|YP_007866415.1|	-	0.02	14.5	0.6	0.062	12.9	0.2	2.0	2	0	0	2	2	2	0	YebG	protein
Clathrin	PF00637.15	gi|479326360|ref|YP_007866415.1|	-	0.22	11.1	1.9	4.9	6.7	0.1	2.8	2	1	1	3	3	3	0	Region	in	Clathrin	and	VPS
PDDEXK_1	PF12705.2	gi|479326361|ref|YP_007866416.1|	-	8e-15	54.9	0.4	4e-13	49.3	0.2	2.2	1	1	1	2	2	2	2	PD-(D/E)XK	nuclease	superfamily
Cas_Cas4	PF01930.12	gi|479326361|ref|YP_007866416.1|	-	4.8e-10	39.5	0.2	6.1e-10	39.2	0.2	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF83
PDDEXK_3	PF13366.1	gi|479326361|ref|YP_007866416.1|	-	1.8e-05	24.7	0.3	4.1e-05	23.6	0.1	1.6	1	1	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
DUF1626	PF07788.6	gi|479326361|ref|YP_007866416.1|	-	0.027	14.2	0.5	0.061	13.1	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1626)
Dna2	PF08696.6	gi|479326361|ref|YP_007866416.1|	-	0.07	12.4	0.0	0.24	10.6	0.0	1.8	1	1	0	1	1	1	0	DNA	replication	factor	Dna2
Exo5	PF09810.4	gi|479326361|ref|YP_007866416.1|	-	0.8	8.8	4.5	0.71	9.0	0.0	2.2	1	1	1	2	2	2	0	Exonuclease	V	-	a	5'	deoxyribonuclease
Glyco_tranf_2_3	PF13641.1	gi|479326362|ref|YP_007866417.1|	-	9.2e-42	143.3	0.0	1.2e-41	143.0	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|479326362|ref|YP_007866417.1|	-	7.8e-29	100.7	0.1	1.1e-28	100.2	0.1	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glycos_transf_2	PF00535.21	gi|479326362|ref|YP_007866417.1|	-	5.7e-26	91.1	0.0	7.8e-26	90.7	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.1	gi|479326362|ref|YP_007866417.1|	-	7.7e-12	44.8	0.0	1.5e-11	43.8	0.0	1.5	2	0	0	2	2	2	1	Glycosyl	transferase	family	21
Glyco_tranf_2_2	PF10111.4	gi|479326362|ref|YP_007866417.1|	-	6.1e-10	38.6	0.0	2.2e-09	36.8	0.0	1.7	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Cellulose_synt	PF03552.9	gi|479326362|ref|YP_007866417.1|	-	0.00015	20.2	4.7	0.0002	19.8	3.3	1.1	1	0	0	1	1	1	1	Cellulose	synthase
Glyco_tranf_2_4	PF13704.1	gi|479326362|ref|YP_007866417.1|	-	0.0043	17.3	0.0	0.0069	16.6	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Anp1	PF03452.9	gi|479326362|ref|YP_007866417.1|	-	0.12	11.5	0.0	0.2	10.7	0.0	1.3	1	0	0	1	1	1	0	Anp1
Lactamase_B_2	PF12706.2	gi|479326364|ref|YP_007866419.1|	-	6.7e-10	38.8	0.1	8.8e-10	38.4	0.1	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|479326364|ref|YP_007866419.1|	-	8.1e-09	35.3	1.5	8e-06	25.6	0.3	2.3	2	0	0	2	2	2	2	Metallo-beta-lactamase	superfamily
Lactamase_B_3	PF13483.1	gi|479326364|ref|YP_007866419.1|	-	2.4e-06	27.3	0.1	3.6e-06	26.7	0.1	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
DHH	PF01368.15	gi|479326364|ref|YP_007866419.1|	-	0.031	13.9	0.0	0.031	13.9	0.0	2.3	2	1	0	2	2	2	0	DHH	family
VIT1	PF01988.14	gi|479326365|ref|YP_007866420.1|	-	3.2e-50	170.5	2.7	3.8e-50	170.3	1.8	1.1	1	0	0	1	1	1	1	VIT	family
DUF2207	PF09972.4	gi|479326365|ref|YP_007866420.1|	-	0.068	11.7	5.7	1.4	7.3	2.1	2.1	1	1	1	2	2	2	0	Predicted	membrane	protein	(DUF2207)
YqbF	PF14553.1	gi|479326365|ref|YP_007866420.1|	-	0.17	11.5	0.4	0.17	11.5	0.2	2.0	2	0	0	2	2	2	0	YqbF,	hypothetical	protein	domain
PGG	PF13962.1	gi|479326365|ref|YP_007866420.1|	-	0.3	10.7	2.1	0.91	9.1	0.4	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function
DUF1304	PF06993.7	gi|479326365|ref|YP_007866420.1|	-	0.67	9.6	3.9	0.43	10.3	0.3	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1304)
MerC	PF03203.9	gi|479326365|ref|YP_007866420.1|	-	2.8	8.3	8.2	6.1	7.2	0.2	2.4	2	0	0	2	2	2	0	MerC	mercury	resistance	protein
DUF1129	PF06570.6	gi|479326365|ref|YP_007866420.1|	-	3.2	6.9	6.3	0.8	8.9	0.5	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1129)
AAA_assoc_C	PF09821.4	gi|479326366|ref|YP_007866421.1|	-	1.5e-33	115.6	0.0	1.8e-33	115.3	0.0	1.0	1	0	0	1	1	1	1	C-terminal	AAA-associated	domain
BPL_N	PF09825.4	gi|479326366|ref|YP_007866421.1|	-	0.035	12.9	0.0	0.039	12.7	0.0	1.0	1	0	0	1	1	1	0	Biotin-protein	ligase,	N	terminal
Telomere_Sde2_2	PF13297.1	gi|479326366|ref|YP_007866421.1|	-	0.049	12.9	0.2	2	7.7	0.0	2.3	2	0	0	2	2	2	0	Telomere	stability	C-terminal
DUF956	PF06115.6	gi|479326366|ref|YP_007866421.1|	-	0.063	12.8	0.1	0.082	12.5	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF956)
HTH_45	PF14947.1	gi|479326366|ref|YP_007866421.1|	-	0.088	12.6	0.9	0.28	11.0	0.1	2.1	1	1	1	2	2	2	0	Winged	helix-turn-helix
LMF1	PF06762.9	gi|479326368|ref|YP_007866423.1|	-	0.61	8.8	9.2	0.62	8.7	6.4	1.1	1	0	0	1	1	1	0	Lipase	maturation	factor
Arif-1	PF06770.6	gi|479326368|ref|YP_007866423.1|	-	1.5	8.1	6.3	1.9	7.8	4.4	1.2	1	0	0	1	1	1	0	Actin-rearrangement-inducing	factor	(Arif-1)
AA_permease	PF00324.16	gi|479326368|ref|YP_007866423.1|	-	1.8	6.8	17.8	0.21	9.8	9.2	1.6	1	1	0	2	2	2	0	Amino	acid	permease
Orbi_NS3	PF01616.11	gi|479326368|ref|YP_007866423.1|	-	3.6	6.4	6.1	0.6	9.0	0.1	2.1	1	1	0	2	2	2	0	Orbivirus	NS3
DUF2512	PF10710.4	gi|479326368|ref|YP_007866423.1|	-	4.6	6.7	13.3	3.3	7.1	8.0	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2512)
PaREP1	PF05942.6	gi|479326369|ref|YP_007866424.1|	-	5.2e-06	26.3	0.0	1.2e-05	25.1	0.0	1.6	1	1	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
Aminotran_1_2	PF00155.16	gi|479326370|ref|YP_007866425.1|	-	1.4e-28	99.8	0.0	1.6e-28	99.7	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_MocR	PF12897.2	gi|479326370|ref|YP_007866425.1|	-	1.9e-07	30.0	0.0	4.3e-07	28.8	0.0	1.4	1	1	0	1	1	1	1	Alanine-glyoxylate	amino-transferase
RNase_Zc3h12a	PF11977.3	gi|479326370|ref|YP_007866425.1|	-	0.025	14.4	0.0	0.043	13.6	0.0	1.4	1	0	0	1	1	1	0	Zc3h12a-like	Ribonuclease	NYN	domain
OCD_Mu_crystall	PF02423.10	gi|479326371|ref|YP_007866426.1|	-	1.5e-26	92.8	0.0	1.8e-26	92.6	0.0	1.0	1	0	0	1	1	1	1	Ornithine	cyclodeaminase/mu-crystallin	family
Shikimate_DH	PF01488.15	gi|479326371|ref|YP_007866426.1|	-	0.00023	21.2	0.2	0.00038	20.5	0.1	1.4	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
NAD_binding_2	PF03446.10	gi|479326371|ref|YP_007866426.1|	-	0.00065	19.5	0.0	0.0012	18.6	0.0	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
DUF137	PF02006.11	gi|479326371|ref|YP_007866426.1|	-	0.00083	18.7	0.2	0.11	11.9	0.0	2.6	2	1	0	2	2	2	2	Protein	of	unknown	function	DUF137
2-Hacid_dh_C	PF02826.14	gi|479326371|ref|YP_007866426.1|	-	0.027	13.6	0.0	0.054	12.6	0.0	1.5	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
HTH_11	PF08279.7	gi|479326372|ref|YP_007866427.1|	-	1.3e-05	24.6	1.4	9.5e-05	21.9	0.0	2.4	2	1	1	3	3	3	1	HTH	domain
HTH_DeoR	PF08220.7	gi|479326372|ref|YP_007866427.1|	-	7.7e-05	22.1	0.1	0.00022	20.6	0.0	1.9	2	0	0	2	2	2	1	DeoR-like	helix-turn-helix	domain
HTH_24	PF13412.1	gi|479326372|ref|YP_007866427.1|	-	9.8e-05	21.6	0.1	9.8e-05	21.6	0.1	1.9	3	0	0	3	3	3	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.17	gi|479326372|ref|YP_007866427.1|	-	0.00043	19.9	0.1	0.0013	18.3	0.0	1.8	2	0	0	2	2	2	1	MarR	family
FeoC	PF09012.5	gi|479326372|ref|YP_007866427.1|	-	0.00059	19.4	0.3	0.0077	15.9	0.0	2.1	2	0	0	2	2	2	1	FeoC	like	transcriptional	regulator
Fe_dep_repress	PF01325.14	gi|479326372|ref|YP_007866427.1|	-	0.0009	19.1	0.4	0.0015	18.4	0.0	1.6	2	0	0	2	2	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Med9	PF07544.8	gi|479326372|ref|YP_007866427.1|	-	0.001	18.7	3.7	0.25	11.0	1.8	2.2	2	0	0	2	2	2	2	RNA	polymerase	II	transcription	mediator	complex	subunit	9
MarR_2	PF12802.2	gi|479326372|ref|YP_007866427.1|	-	0.0029	17.2	0.0	0.004	16.7	0.0	1.3	1	0	0	1	1	1	1	MarR	family
DUF4423	PF14394.1	gi|479326372|ref|YP_007866427.1|	-	0.011	15.2	1.3	0.023	14.2	0.3	1.8	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4423)
DUF2250	PF10007.4	gi|479326372|ref|YP_007866427.1|	-	0.011	15.5	3.6	0.014	15.2	0.3	2.0	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF4393	PF14337.1	gi|479326372|ref|YP_007866427.1|	-	0.015	14.7	0.5	0.018	14.5	0.3	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4393)
HTH_5	PF01022.15	gi|479326372|ref|YP_007866427.1|	-	0.022	14.4	0.0	0.045	13.4	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
Bap31	PF05529.7	gi|479326372|ref|YP_007866427.1|	-	0.03	13.7	2.0	0.034	13.5	1.4	1.2	1	0	0	1	1	1	0	B-cell	receptor-associated	protein	31-like
TrmB	PF01978.14	gi|479326372|ref|YP_007866427.1|	-	0.031	13.9	0.3	0.07	12.8	0.1	1.9	1	1	1	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_Mga	PF08280.6	gi|479326372|ref|YP_007866427.1|	-	0.038	13.7	0.0	0.092	12.5	0.0	1.6	1	0	0	1	1	1	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
Bacillus_HBL	PF05791.6	gi|479326372|ref|YP_007866427.1|	-	0.041	13.2	1.3	0.056	12.8	0.8	1.2	1	1	0	1	1	1	0	Bacillus	haemolytic	enterotoxin	(HBL)
DUF4140	PF13600.1	gi|479326372|ref|YP_007866427.1|	-	0.044	14.2	1.1	0.076	13.4	0.7	1.6	1	1	0	1	1	1	0	N-terminal	domain	of	unknown	function	(DUF4140)
HTH_Crp_2	PF13545.1	gi|479326372|ref|YP_007866427.1|	-	0.046	13.5	0.0	0.081	12.7	0.0	1.4	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
Phage_rep_org_N	PF09681.5	gi|479326372|ref|YP_007866427.1|	-	0.047	13.2	0.1	0.091	12.3	0.0	1.5	1	1	1	2	2	2	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
Rrf2	PF02082.15	gi|479326372|ref|YP_007866427.1|	-	0.055	13.5	0.1	0.19	11.8	0.0	1.9	1	1	1	2	2	2	0	Transcriptional	regulator
Phage_int_SAM_1	PF02899.12	gi|479326372|ref|YP_007866427.1|	-	0.12	12.5	0.0	0.25	11.4	0.0	1.7	2	1	0	2	2	1	0	Phage	integrase,	N-terminal	SAM-like	domain
APG6	PF04111.7	gi|479326372|ref|YP_007866427.1|	-	0.14	11.1	2.8	0.16	10.9	1.9	1.0	1	0	0	1	1	1	0	Autophagy	protein	Apg6
Glycos_transf_2	PF00535.21	gi|479326373|ref|YP_007866428.1|	-	3.3e-30	104.9	1.4	3.4e-30	104.9	0.3	1.4	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|479326373|ref|YP_007866428.1|	-	2.4e-09	37.3	0.0	2.8e-09	37.1	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.4	gi|479326373|ref|YP_007866428.1|	-	3.6e-05	22.9	0.1	9.6e-05	21.5	0.0	1.7	2	0	0	2	2	2	1	Glycosyltransferase	like	family	2
Glyco_transf_21	PF13506.1	gi|479326373|ref|YP_007866428.1|	-	0.0088	15.3	0.0	0.015	14.5	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_tranf_2_4	PF13704.1	gi|479326373|ref|YP_007866428.1|	-	0.11	12.7	0.0	0.21	11.9	0.0	1.5	1	0	0	1	1	1	0	Glycosyl	transferase	family	2
DUF1947	PF09183.5	gi|479326374|ref|YP_007866429.1|	-	5.9e-31	106.0	1.0	1.5e-30	104.7	0.7	1.7	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1947)
PUA	PF01472.15	gi|479326374|ref|YP_007866429.1|	-	6e-16	57.9	0.2	1e-15	57.2	0.2	1.4	1	0	0	1	1	1	1	PUA	domain
DUF2001	PF09393.5	gi|479326374|ref|YP_007866429.1|	-	0.11	12.1	0.4	2.1	8.0	0.2	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2001)
Ald_Xan_dh_C2	PF02738.13	gi|479326375|ref|YP_007866430.1|	-	9.1e-135	450.0	0.0	1.2e-134	449.7	0.0	1.0	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|479326375|ref|YP_007866430.1|	-	1.1e-12	48.0	0.0	5.5e-11	42.5	0.0	2.5	1	1	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
PYNP_C	PF07831.8	gi|479326375|ref|YP_007866430.1|	-	0.051	13.0	0.0	0.17	11.3	0.0	1.9	1	0	0	1	1	1	0	Pyrimidine	nucleoside	phosphorylase	C-terminal	domain
Peptidase_M48	PF01435.13	gi|479326376|ref|YP_007866431.1|	-	9.5e-21	74.3	5.9	2.8e-19	69.5	4.1	2.6	1	1	0	1	1	1	1	Peptidase	family	M48
DUF2268	PF10026.4	gi|479326376|ref|YP_007866431.1|	-	0.022	14.1	0.1	0.061	12.6	0.1	1.6	2	0	0	2	2	2	0	Predicted	Zn-dependent	protease	(DUF2268)
DUF955	PF06114.8	gi|479326376|ref|YP_007866431.1|	-	0.046	13.4	4.5	0.13	11.9	3.2	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF955)
Peptidase_M56	PF05569.6	gi|479326376|ref|YP_007866431.1|	-	0.066	12.1	1.5	0.12	11.3	0.6	1.9	1	1	0	1	1	1	0	BlaR1	peptidase	M56
ADH_N	PF08240.7	gi|479326377|ref|YP_007866432.1|	-	3.8e-26	90.9	1.9	4.3e-26	90.8	0.3	1.8	2	0	0	2	2	2	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|479326377|ref|YP_007866432.1|	-	2.4e-20	72.3	0.1	4.4e-20	71.5	0.1	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|479326377|ref|YP_007866432.1|	-	0.02	15.7	0.0	0.037	14.9	0.0	1.6	1	1	0	1	1	1	0	Zinc-binding	dehydrogenase
DUF4147	PF13660.1	gi|479326377|ref|YP_007866432.1|	-	0.11	11.6	0.1	0.28	10.2	0.0	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4147)
Fer4_8	PF13183.1	gi|479326377|ref|YP_007866432.1|	-	0.14	12.1	0.4	0.14	12.1	0.3	1.7	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
CoA_binding	PF02629.14	gi|479326377|ref|YP_007866432.1|	-	0.16	12.5	1.5	0.6	10.6	0.5	2.2	1	1	1	2	2	2	0	CoA	binding	domain
CobD_Cbib	PF03186.8	gi|479326378|ref|YP_007866433.1|	-	6.4e-80	268.3	0.0	7.6e-80	268.1	0.0	1.0	1	0	0	1	1	1	1	CobD/Cbib	protein
CobS	PF02654.10	gi|479326379|ref|YP_007866434.1|	-	5.2e-39	134.2	7.8	7.8e-39	133.6	5.4	1.3	1	0	0	1	1	1	1	Cobalamin-5-phosphate	synthase
GATase_3	PF07685.9	gi|479326380|ref|YP_007866435.1|	-	1.2e-28	99.6	0.0	3.1e-28	98.3	0.0	1.7	2	0	0	2	2	2	1	CobB/CobQ-like	glutamine	amidotransferase	domain
CbiA	PF01656.18	gi|479326380|ref|YP_007866435.1|	-	3.3e-10	39.6	0.0	7.3e-10	38.5	0.0	1.5	2	0	0	2	2	2	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_26	PF13500.1	gi|479326380|ref|YP_007866435.1|	-	1.2e-09	38.1	0.0	4.9e-07	29.5	0.0	2.3	2	0	0	2	2	2	2	AAA	domain
GATase	PF00117.23	gi|479326380|ref|YP_007866435.1|	-	0.00017	21.1	0.0	0.00058	19.3	0.0	1.9	2	0	0	2	2	2	1	Glutamine	amidotransferase	class-I
SNO	PF01174.14	gi|479326380|ref|YP_007866435.1|	-	0.0015	18.1	0.0	0.003	17.1	0.0	1.5	1	1	0	1	1	1	1	SNO	glutamine	amidotransferase	family
Peptidase_S51	PF03575.12	gi|479326380|ref|YP_007866435.1|	-	0.0058	16.3	0.0	0.012	15.3	0.0	1.5	1	0	0	1	1	1	1	Peptidase	family	S51
GMP_synt_C	PF00958.17	gi|479326381|ref|YP_007866436.1|	-	1.4e-28	98.4	0.1	3.7e-28	97.0	0.0	1.7	1	0	0	1	1	1	1	GMP	synthase	C	terminal	domain
NAD_synthase	PF02540.12	gi|479326381|ref|YP_007866436.1|	-	7.8e-13	47.8	0.2	5e-12	45.2	0.1	2.1	1	1	0	1	1	1	1	NAD	synthase
ATP_bind_3	PF01171.15	gi|479326381|ref|YP_007866436.1|	-	7e-08	32.1	0.0	1.2e-07	31.4	0.0	1.3	1	0	0	1	1	1	1	PP-loop	family
tRNA_Me_trans	PF03054.11	gi|479326381|ref|YP_007866436.1|	-	0.00092	17.8	0.0	0.11	11.0	0.0	2.3	2	0	0	2	2	2	2	tRNA	methyl	transferase
QueC	PF06508.8	gi|479326381|ref|YP_007866436.1|	-	0.001	18.4	0.0	0.026	13.8	0.0	2.2	1	1	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
ThiI	PF02568.9	gi|479326381|ref|YP_007866436.1|	-	0.0035	16.8	0.1	0.032	13.7	0.0	2.5	2	1	0	2	2	2	1	Thiamine	biosynthesis	protein	(ThiI)
Asn_synthase	PF00733.16	gi|479326381|ref|YP_007866436.1|	-	0.0043	16.5	0.0	0.011	15.3	0.0	1.7	2	0	0	2	2	2	1	Asparagine	synthase
DUF2392	PF10288.4	gi|479326381|ref|YP_007866436.1|	-	0.014	15.7	0.0	0.048	14.0	0.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2392)
DUF1152	PF06626.7	gi|479326381|ref|YP_007866436.1|	-	0.058	12.4	0.1	0.18	10.9	0.0	1.9	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1152)
Peptidase_M48	PF01435.13	gi|479326382|ref|YP_007866437.1|	-	3.3e-27	95.5	0.1	2e-26	92.9	0.0	2.0	1	1	1	2	2	2	1	Peptidase	family	M48
Zn_peptidase_2	PF04298.7	gi|479326382|ref|YP_007866437.1|	-	0.0038	16.6	0.1	0.0038	16.6	0.1	1.8	3	0	0	3	3	3	1	Putative	neutral	zinc	metallopeptidase
CBS	PF00571.23	gi|479326383|ref|YP_007866438.1|	-	5.1e-33	112.5	5.7	3.6e-16	58.6	0.1	2.0	2	0	0	2	2	2	2	CBS	domain
Ribosomal_L9_C	PF03948.9	gi|479326383|ref|YP_007866438.1|	-	0.055	13.5	0.1	1.8	8.7	0.1	2.2	2	0	0	2	2	2	0	Ribosomal	protein	L9,	C-terminal	domain
DUF1840	PF08895.6	gi|479326383|ref|YP_007866438.1|	-	0.11	12.5	0.0	2.3	8.3	0.0	2.1	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF1840)
Polysacc_synt_3	PF13440.1	gi|479326384|ref|YP_007866439.1|	-	5.1e-19	68.7	35.5	5.1e-19	68.7	24.6	3.0	2	1	0	3	3	3	2	Polysaccharide	biosynthesis	protein
Polysacc_synt	PF01943.12	gi|479326384|ref|YP_007866439.1|	-	2e-06	27.3	35.9	2e-06	27.3	24.9	3.1	1	1	2	3	3	3	3	Polysaccharide	biosynthesis	protein
BTP	PF05232.7	gi|479326384|ref|YP_007866439.1|	-	0.00015	21.4	2.0	0.00015	21.4	1.4	4.4	4	0	0	4	4	4	1	Bacterial	Transmembrane	Pair	family
DeoC	PF01791.4	gi|479326385|ref|YP_007866440.1|	-	5.1e-32	111.0	0.0	6e-32	110.8	0.0	1.1	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
Peripla_BP_4	PF13407.1	gi|479326385|ref|YP_007866440.1|	-	0.031	13.6	0.2	0.059	12.7	0.1	1.5	2	0	0	2	2	2	0	Periplasmic	binding	protein	domain
PMT_2	PF13231.1	gi|479326386|ref|YP_007866441.1|	-	3.4e-09	36.8	14.4	3.4e-09	36.8	10.0	2.8	3	0	0	3	3	3	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
DUF2029	PF09594.5	gi|479326386|ref|YP_007866441.1|	-	0.017	14.6	14.8	0.036	13.5	10.2	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2029)
PMT	PF02366.13	gi|479326386|ref|YP_007866441.1|	-	1.3	8.2	38.4	0.036	13.4	11.7	4.4	2	1	2	4	4	4	0	Dolichyl-phosphate-mannose-protein	mannosyltransferase
AA_permease	PF00324.16	gi|479326387|ref|YP_007866442.1|	-	3.2e-21	75.2	54.1	7.6e-21	73.9	37.5	1.6	1	1	0	1	1	1	1	Amino	acid	permease
AA_permease_2	PF13520.1	gi|479326387|ref|YP_007866442.1|	-	5.7e-16	58.0	63.0	6.8e-16	57.8	43.7	1.1	1	0	0	1	1	1	1	Amino	acid	permease
NTP_transferase	PF00483.18	gi|479326388|ref|YP_007866443.1|	-	4.5e-28	98.2	0.0	5.6e-28	97.8	0.0	1.0	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|479326388|ref|YP_007866443.1|	-	3.3e-07	30.4	0.0	4.4e-07	30.1	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
BcrAD_BadFG	PF01869.15	gi|479326389|ref|YP_007866444.1|	-	6e-53	179.8	0.8	6.9e-53	179.6	0.6	1.0	1	0	0	1	1	1	1	BadF/BadG/BcrA/BcrD	ATPase	family
G_glu_transpept	PF01019.16	gi|479326390|ref|YP_007866445.1|	-	9.5e-108	360.8	0.0	1.1e-107	360.6	0.0	1.1	1	0	0	1	1	1	1	Gamma-glutamyltranspeptidase
LpxC	PF03331.8	gi|479326391|ref|YP_007866446.1|	-	0.024	13.5	0.0	0.024	13.5	0.0	1.1	1	0	0	1	1	1	0	UDP-3-O-acyl	N-acetylglycosamine	deacetylase
Pep_deformylase	PF01327.16	gi|479326391|ref|YP_007866446.1|	-	0.1	11.9	0.1	0.18	11.1	0.0	1.3	1	0	0	1	1	1	0	Polypeptide	deformylase
DUF3529	PF12046.3	gi|479326391|ref|YP_007866446.1|	-	0.13	11.3	0.0	0.18	10.7	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3529)
PAP_fibrillin	PF04755.7	gi|479326391|ref|YP_007866446.1|	-	0.13	11.9	0.0	0.16	11.7	0.0	1.1	1	0	0	1	1	1	0	PAP_fibrillin
MazG	PF03819.12	gi|479326392|ref|YP_007866447.1|	-	3.2e-15	55.8	0.3	3.6e-15	55.6	0.2	1.0	1	0	0	1	1	1	1	MazG	nucleotide	pyrophosphohydrolase	domain
PRA-PH	PF01503.12	gi|479326392|ref|YP_007866447.1|	-	3.7e-05	23.9	0.1	4e-05	23.8	0.1	1.1	1	0	0	1	1	1	1	Phosphoribosyl-ATP	pyrophosphohydrolase
MazG-like	PF12643.2	gi|479326392|ref|YP_007866447.1|	-	0.00026	20.8	0.1	0.00028	20.7	0.1	1.1	1	0	0	1	1	1	1	MazG-like	family
Helicase_RecD	PF05127.9	gi|479326393|ref|YP_007866448.1|	-	5.4e-47	159.6	0.0	9.5e-47	158.8	0.0	1.4	1	0	0	1	1	1	1	Helicase
GNAT_acetyltr_2	PF13718.1	gi|479326393|ref|YP_007866448.1|	-	1.3e-43	148.5	0.0	6.8e-43	146.2	0.0	2.0	1	1	0	1	1	1	1	GNAT	acetyltransferase	2
DUF1726	PF08351.6	gi|479326393|ref|YP_007866448.1|	-	3.3e-21	74.7	0.1	7e-21	73.7	0.0	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1726)
Acetyltransf_7	PF13508.1	gi|479326393|ref|YP_007866448.1|	-	1.9e-06	27.9	0.0	6e-06	26.3	0.0	1.9	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.19	gi|479326393|ref|YP_007866448.1|	-	3.1e-06	27.1	0.0	1.5e-05	24.9	0.0	2.2	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	family
tRNA_bind_2	PF13725.1	gi|479326393|ref|YP_007866448.1|	-	0.00064	19.7	0.0	0.0018	18.3	0.0	1.7	1	1	0	1	1	1	1	Possible	tRNA	binding	domain
AAA_30	PF13604.1	gi|479326393|ref|YP_007866448.1|	-	0.00081	19.0	0.1	0.0015	18.1	0.1	1.5	1	0	0	1	1	1	1	AAA	domain
DEAD	PF00270.24	gi|479326393|ref|YP_007866448.1|	-	0.051	13.0	0.0	0.18	11.2	0.0	2.0	1	0	0	1	1	1	0	DEAD/DEAH	box	helicase
NnrU	PF07298.6	gi|479326395|ref|YP_007866450.1|	-	0.023	14.0	1.9	0.035	13.4	1.3	1.3	1	0	0	1	1	1	0	NnrU	protein
Tic20	PF09685.5	gi|479326395|ref|YP_007866450.1|	-	7.3	6.6	9.6	0.99	9.4	3.7	1.7	2	0	0	2	2	2	0	Tic20-like	protein
Aminotran_3	PF00202.16	gi|479326396|ref|YP_007866451.1|	-	1.1e-100	336.8	0.0	1.2e-100	336.6	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
TPP_enzyme_N	PF02776.13	gi|479326397|ref|YP_007866452.1|	-	2.7e-42	144.1	0.0	7.2e-42	142.7	0.0	1.7	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|479326397|ref|YP_007866452.1|	-	7e-11	41.9	0.0	2.1e-10	40.3	0.0	1.8	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.17	gi|479326397|ref|YP_007866452.1|	-	4.8e-06	26.3	0.0	7.5e-05	22.5	0.0	2.6	2	1	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	central	domain
Aldo_ket_red	PF00248.16	gi|479326398|ref|YP_007866453.1|	-	1.4e-72	243.8	0.2	1.6e-72	243.7	0.1	1.0	1	0	0	1	1	1	1	Aldo/keto	reductase	family
RTP	PF02334.11	gi|479326398|ref|YP_007866453.1|	-	0.12	12.3	0.1	0.72	9.8	0.0	2.3	3	0	0	3	3	3	0	Replication	terminator	protein
DUF1446	PF07287.6	gi|479326398|ref|YP_007866453.1|	-	0.12	10.8	0.1	0.86	8.0	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1446)
Pkinase	PF00069.20	gi|479326399|ref|YP_007866454.1|	-	7.4e-25	87.5	0.0	1.2e-24	86.9	0.0	1.3	1	0	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|479326399|ref|YP_007866454.1|	-	7.5e-12	44.8	0.1	2.5e-11	43.1	0.0	2.0	2	1	0	2	2	2	1	Protein	tyrosine	kinase
Apc3	PF12895.2	gi|479326399|ref|YP_007866454.1|	-	8.3e-11	41.8	0.8	2.4e-07	30.7	0.1	2.6	2	0	0	2	2	2	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_16	PF13432.1	gi|479326399|ref|YP_007866454.1|	-	5e-08	33.4	1.0	0.00043	20.8	0.0	4.1	3	1	1	4	4	4	2	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|479326399|ref|YP_007866454.1|	-	9.2e-06	25.2	0.4	0.00037	20.0	0.0	3.4	3	1	0	3	3	3	1	TPR	repeat
TPR_19	PF14559.1	gi|479326399|ref|YP_007866454.1|	-	1.2e-05	25.5	0.0	0.0018	18.5	0.0	2.6	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|479326399|ref|YP_007866454.1|	-	2e-05	24.1	8.1	0.0037	17.0	0.0	4.6	5	0	0	5	5	5	2	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|479326399|ref|YP_007866454.1|	-	0.00022	20.6	3.7	0.028	14.0	0.0	4.3	4	0	0	4	4	4	1	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|479326399|ref|YP_007866454.1|	-	0.00059	20.2	0.0	0.36	11.5	0.0	3.4	2	1	1	3	3	3	1	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|479326399|ref|YP_007866454.1|	-	0.0017	18.0	0.1	0.93	9.4	0.0	3.8	3	0	0	3	3	3	1	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|479326399|ref|YP_007866454.1|	-	0.0022	17.8	0.1	1.1	9.2	0.0	3.1	2	1	1	3	3	3	1	Tetratricopeptide	repeat
APH	PF01636.18	gi|479326399|ref|YP_007866454.1|	-	0.01	15.5	0.0	2.6	7.7	0.0	2.5	1	1	1	2	2	2	0	Phosphotransferase	enzyme	family
TPR_6	PF13174.1	gi|479326399|ref|YP_007866454.1|	-	0.022	15.1	0.7	11	6.6	0.0	4.5	3	1	1	4	4	4	0	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|479326399|ref|YP_007866454.1|	-	0.24	11.2	5.0	0.86	9.5	0.0	3.4	2	1	1	3	3	3	0	Tetratricopeptide	repeat
Pirin_C	PF05726.8	gi|479326400|ref|YP_007866455.1|	-	0.044	13.8	0.0	0.052	13.6	0.0	1.1	1	0	0	1	1	1	0	Pirin	C-terminal	cupin	domain
Ribonuc_L-PSP	PF01042.16	gi|479326401|ref|YP_007866456.1|	-	5.1e-42	142.4	0.0	5.6e-42	142.3	0.0	1.0	1	0	0	1	1	1	1	Endoribonuclease	L-PSP
Pox_J1	PF03338.10	gi|479326401|ref|YP_007866456.1|	-	0.072	12.7	0.0	0.09	12.4	0.0	1.2	1	0	0	1	1	1	0	Poxvirus	J1	protein
CBS	PF00571.23	gi|479326402|ref|YP_007866457.1|	-	2.2e-40	136.1	12.3	1.1e-11	44.2	0.3	4.2	4	0	0	4	4	4	4	CBS	domain
ADH_N	PF08240.7	gi|479326403|ref|YP_007866458.1|	-	1.1e-22	79.8	0.2	1.8e-22	79.1	0.1	1.3	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|479326403|ref|YP_007866458.1|	-	0.0014	18.1	0.0	0.0026	17.3	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
FAD_binding_3	PF01494.14	gi|479326403|ref|YP_007866458.1|	-	0.0088	15.1	0.0	0.014	14.4	0.0	1.2	1	0	0	1	1	1	1	FAD	binding	domain
DapB_N	PF01113.15	gi|479326403|ref|YP_007866458.1|	-	0.022	14.6	0.0	0.044	13.7	0.0	1.6	1	0	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
AMP-binding	PF00501.23	gi|479326404|ref|YP_007866459.1|	-	2.9e-85	286.1	0.0	3.7e-85	285.8	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|479326404|ref|YP_007866459.1|	-	2.7e-21	76.2	0.7	6.5e-21	75.0	0.5	1.7	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
Molydop_binding	PF01568.16	gi|479326404|ref|YP_007866459.1|	-	0.1	12.4	0.2	17	5.3	0.0	2.5	2	0	0	2	2	2	0	Molydopterin	dinucleotide	binding	domain
Voltage_CLC	PF00654.15	gi|479326405|ref|YP_007866460.1|	-	6.4e-90	301.7	30.1	6.4e-90	301.7	20.8	2.0	2	0	0	2	2	2	2	Voltage	gated	chloride	channel
CBS	PF00571.23	gi|479326405|ref|YP_007866460.1|	-	2.6e-18	65.5	0.5	4.7e-08	32.6	0.0	2.6	3	0	0	3	3	3	2	CBS	domain
Oxidored_molyb	PF00174.14	gi|479326406|ref|YP_007866461.1|	-	8.2e-46	155.4	0.0	9.9e-46	155.2	0.0	1.0	1	0	0	1	1	1	1	Oxidoreductase	molybdopterin	binding	domain
PsiE	PF06146.7	gi|479326407|ref|YP_007866462.1|	-	3.1e-05	24.1	3.0	7.5e-05	22.8	2.1	1.6	1	0	0	1	1	1	1	Phosphate-starvation-inducible	E
MR_MLE_C	PF13378.1	gi|479326408|ref|YP_007866463.1|	-	7.2e-20	71.0	0.0	1.2e-19	70.3	0.0	1.4	1	0	0	1	1	1	1	Enolase	C-terminal	domain-like
MR_MLE_N	PF02746.11	gi|479326408|ref|YP_007866463.1|	-	1.5e-14	53.9	0.0	3.2e-14	52.9	0.0	1.5	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	N-terminal	domain
MR_MLE	PF01188.16	gi|479326408|ref|YP_007866463.1|	-	3.4e-14	53.1	0.1	4e-13	49.6	0.0	2.4	2	0	0	2	2	2	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
DHDPS	PF00701.17	gi|479326409|ref|YP_007866464.1|	-	1.2e-42	145.4	0.0	1.5e-42	145.1	0.0	1.0	1	0	0	1	1	1	1	Dihydrodipicolinate	synthetase	family
PfkB	PF00294.19	gi|479326410|ref|YP_007866465.1|	-	2.6e-39	135.1	0.0	3.2e-39	134.8	0.0	1.0	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Aldedh	PF00171.17	gi|479326411|ref|YP_007866466.1|	-	1.3e-113	379.8	0.0	1.5e-113	379.6	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
LuxC	PF05893.9	gi|479326411|ref|YP_007866466.1|	-	6.7e-08	31.6	0.0	1.3e-07	30.7	0.0	1.4	1	0	0	1	1	1	1	Acyl-CoA	reductase	(LuxC)
Repressor_Mnt	PF11423.3	gi|479326411|ref|YP_007866466.1|	-	3.6	6.9	6.7	18	4.7	0.4	2.8	2	0	0	2	2	2	0	Regulatory	protein	Mnt
Na_Ca_ex	PF01699.19	gi|479326412|ref|YP_007866467.1|	-	1.3e-33	115.5	25.6	1.6e-20	73.1	3.8	2.1	2	0	0	2	2	2	2	Sodium/calcium	exchanger	protein
DUF4131	PF13567.1	gi|479326412|ref|YP_007866467.1|	-	7.1	5.9	10.7	6.1	6.2	0.2	2.5	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4131)
Molybdopterin	PF00384.17	gi|479326413|ref|YP_007866468.1|	-	6.1e-12	44.9	0.0	1.3e-06	27.4	0.0	2.2	2	0	0	2	2	2	2	Molybdopterin	oxidoreductase
Molydop_binding	PF01568.16	gi|479326413|ref|YP_007866468.1|	-	0.12	12.2	0.0	2.7	7.8	0.0	2.7	2	1	0	2	2	2	0	Molydopterin	dinucleotide	binding	domain
DUF1404	PF07185.6	gi|479326414|ref|YP_007866469.1|	-	3.3e-21	75.6	8.2	3.8e-21	75.3	5.7	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1404)
SecE	PF00584.15	gi|479326414|ref|YP_007866469.1|	-	0.011	15.3	0.4	0.035	13.6	0.3	1.8	1	0	0	1	1	1	0	SecE/Sec61-gamma	subunits	of	protein	translocation	complex
Ferric_reduct	PF01794.14	gi|479326414|ref|YP_007866469.1|	-	0.088	12.8	2.0	0.19	11.8	1.4	1.7	1	1	0	1	1	1	0	Ferric	reductase	like	transmembrane	component
HTH_24	PF13412.1	gi|479326415|ref|YP_007866470.1|	-	8.5e-07	28.2	0.1	1.8e-06	27.2	0.1	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|479326415|ref|YP_007866470.1|	-	1.3e-06	27.9	0.6	2.8e-06	26.8	0.1	1.8	2	0	0	2	2	2	1	HTH	domain
TrmB	PF01978.14	gi|479326415|ref|YP_007866470.1|	-	2e-06	27.4	0.0	3.6e-06	26.5	0.0	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.17	gi|479326415|ref|YP_007866470.1|	-	7.8e-06	25.5	0.1	1.7e-05	24.4	0.0	1.5	1	0	0	1	1	1	1	MarR	family
FaeA	PF04703.7	gi|479326415|ref|YP_007866470.1|	-	2.3e-05	24.4	0.0	4.5e-05	23.5	0.0	1.5	1	0	0	1	1	1	1	FaeA-like	protein
MarR_2	PF12802.2	gi|479326415|ref|YP_007866470.1|	-	2.9e-05	23.6	0.0	4.9e-05	22.9	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_20	PF12840.2	gi|479326415|ref|YP_007866470.1|	-	5.9e-05	22.7	0.0	0.00011	21.8	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
LexA_DNA_bind	PF01726.11	gi|479326415|ref|YP_007866470.1|	-	0.00031	20.2	0.0	0.00062	19.2	0.0	1.5	1	0	0	1	1	1	1	LexA	DNA	binding	domain
HTH_34	PF13601.1	gi|479326415|ref|YP_007866470.1|	-	0.0009	19.2	0.1	0.0021	18.0	0.0	1.6	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
PadR	PF03551.9	gi|479326415|ref|YP_007866470.1|	-	0.00097	18.8	0.0	0.0018	17.9	0.0	1.5	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_DeoR	PF08220.7	gi|479326415|ref|YP_007866470.1|	-	0.0024	17.3	0.0	0.0056	16.1	0.0	1.6	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
HTH_27	PF13463.1	gi|479326415|ref|YP_007866470.1|	-	0.0035	17.6	0.0	0.0069	16.6	0.0	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
z-alpha	PF02295.12	gi|479326415|ref|YP_007866470.1|	-	0.0052	16.5	0.8	0.023	14.4	0.1	2.5	3	1	0	3	3	2	1	Adenosine	deaminase	z-alpha	domain
HTH_10	PF04967.7	gi|479326415|ref|YP_007866470.1|	-	0.0076	15.8	0.0	0.015	14.8	0.0	1.4	1	0	0	1	1	1	1	HTH	DNA	binding	domain
HTH_IclR	PF09339.5	gi|479326415|ref|YP_007866470.1|	-	0.012	15.2	0.0	0.031	13.8	0.0	1.7	2	0	0	2	2	2	0	IclR	helix-turn-helix	domain
HxlR	PF01638.12	gi|479326415|ref|YP_007866470.1|	-	0.012	15.2	0.1	0.031	13.8	0.0	1.6	1	1	0	1	1	1	0	HxlR-like	helix-turn-helix
DUF387	PF04079.11	gi|479326415|ref|YP_007866470.1|	-	0.027	13.8	0.0	0.059	12.7	0.0	1.5	1	0	0	1	1	1	0	Putative	transcriptional	regulators	(Ypuh-like)
Sulfolobus_pRN	PF05584.6	gi|479326415|ref|YP_007866470.1|	-	0.028	14.3	0.0	0.059	13.3	0.0	1.5	1	0	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
DUF4422	PF14393.1	gi|479326415|ref|YP_007866470.1|	-	0.032	13.8	0.1	0.059	12.9	0.1	1.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4422)
HTH_Crp_2	PF13545.1	gi|479326415|ref|YP_007866470.1|	-	0.04	13.7	0.0	0.33	10.7	0.0	2.2	2	0	0	2	2	2	0	Crp-like	helix-turn-helix	domain
Rrf2	PF02082.15	gi|479326415|ref|YP_007866470.1|	-	0.12	12.4	0.0	0.27	11.3	0.0	1.5	1	0	0	1	1	1	0	Transcriptional	regulator
Sigma70_r4	PF04545.11	gi|479326415|ref|YP_007866470.1|	-	0.13	11.5	0.0	0.28	10.5	0.0	1.5	1	0	0	1	1	1	0	Sigma-70,	region	4
AAA_21	PF13304.1	gi|479326416|ref|YP_007866471.1|	-	0.031	14.2	0.5	0.036	14.0	0.3	1.0	1	0	0	1	1	1	0	AAA	domain
AA_permease_2	PF13520.1	gi|479326418|ref|YP_007866473.1|	-	4e-38	131.0	63.9	6.3e-38	130.4	44.3	1.3	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|479326418|ref|YP_007866473.1|	-	1e-05	24.1	59.0	1.8e-05	23.3	40.9	1.3	1	1	0	1	1	1	1	Amino	acid	permease
HTH_45	PF14947.1	gi|479326419|ref|YP_007866474.1|	-	6.8e-09	35.4	2.1	1e-08	34.8	1.5	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_11	PF08279.7	gi|479326419|ref|YP_007866474.1|	-	4.7e-07	29.3	0.7	7.1e-07	28.7	0.3	1.4	1	1	0	1	1	1	1	HTH	domain
HTH_24	PF13412.1	gi|479326419|ref|YP_007866474.1|	-	2.7e-06	26.6	0.8	4.7e-06	25.8	0.6	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.14	gi|479326419|ref|YP_007866474.1|	-	3.3e-06	26.7	0.2	5.1e-06	26.0	0.1	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.5	gi|479326419|ref|YP_007866474.1|	-	6.1e-06	25.7	0.0	9.2e-06	25.1	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_23	PF13384.1	gi|479326419|ref|YP_007866474.1|	-	2.4e-05	23.8	0.1	3.7e-05	23.2	0.0	1.3	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_12	PF08461.5	gi|479326419|ref|YP_007866474.1|	-	3.6e-05	23.3	1.5	6.2e-05	22.6	1.0	1.4	1	0	0	1	1	1	1	Ribonuclease	R	winged-helix	domain
HTH_20	PF12840.2	gi|479326419|ref|YP_007866474.1|	-	4.5e-05	23.1	0.0	6.9e-05	22.5	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|479326419|ref|YP_007866474.1|	-	0.00011	22.1	0.0	0.00021	21.3	0.0	1.3	1	0	0	1	1	1	1	Transcriptional	regulator
GntR	PF00392.16	gi|479326419|ref|YP_007866474.1|	-	0.00018	20.8	0.1	0.00031	20.1	0.1	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
SelB-wing_3	PF09107.6	gi|479326419|ref|YP_007866474.1|	-	0.0002	20.7	0.0	0.0003	20.1	0.0	1.3	1	0	0	1	1	1	1	Elongation	factor	SelB,	winged	helix
HTH_DeoR	PF08220.7	gi|479326419|ref|YP_007866474.1|	-	0.00026	20.4	0.2	0.00055	19.4	0.1	1.5	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
HTH_Crp_2	PF13545.1	gi|479326419|ref|YP_007866474.1|	-	0.00029	20.5	0.0	0.00048	19.8	0.0	1.3	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
MarR_2	PF12802.2	gi|479326419|ref|YP_007866474.1|	-	0.0003	20.3	0.0	0.00048	19.7	0.0	1.2	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.17	gi|479326419|ref|YP_007866474.1|	-	0.00049	19.7	0.3	0.0014	18.2	0.1	1.7	2	0	0	2	2	2	1	MarR	family
Sulfolobus_pRN	PF05584.6	gi|479326419|ref|YP_007866474.1|	-	0.0012	18.8	0.3	0.0018	18.1	0.2	1.3	1	0	0	1	1	1	1	Sulfolobus	plasmid	regulatory	protein
GerE	PF00196.14	gi|479326419|ref|YP_007866474.1|	-	0.0013	17.9	0.0	0.0026	17.0	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	luxR	family
HTH_5	PF01022.15	gi|479326419|ref|YP_007866474.1|	-	0.0022	17.6	0.3	0.0037	16.8	0.2	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
Fe_dep_repress	PF01325.14	gi|479326419|ref|YP_007866474.1|	-	0.0024	17.7	0.2	0.005	16.7	0.1	1.5	1	1	1	2	2	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_36	PF13730.1	gi|479326419|ref|YP_007866474.1|	-	0.0035	17.4	0.1	0.0045	17.0	0.1	1.4	1	1	0	1	1	1	1	Helix-turn-helix	domain
DUF4423	PF14394.1	gi|479326419|ref|YP_007866474.1|	-	0.0037	16.8	0.1	0.005	16.3	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
FaeA	PF04703.7	gi|479326419|ref|YP_007866474.1|	-	0.0038	17.3	0.0	0.0061	16.6	0.0	1.2	1	0	0	1	1	1	1	FaeA-like	protein
DUF505	PF04458.7	gi|479326419|ref|YP_007866474.1|	-	0.0057	14.8	0.2	0.0065	14.6	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF505)
HTH_27	PF13463.1	gi|479326419|ref|YP_007866474.1|	-	0.0079	16.5	0.1	0.014	15.7	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
Phage_rep_org_N	PF09681.5	gi|479326419|ref|YP_007866474.1|	-	0.0085	15.6	0.0	0.017	14.6	0.0	1.5	1	1	1	2	2	2	1	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
DUF2250	PF10007.4	gi|479326419|ref|YP_007866474.1|	-	0.009	15.8	0.3	0.009	15.8	0.2	2.1	2	1	0	2	2	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_Mga	PF08280.6	gi|479326419|ref|YP_007866474.1|	-	0.0095	15.6	0.2	0.019	14.7	0.1	1.5	1	0	0	1	1	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
B-block_TFIIIC	PF04182.7	gi|479326419|ref|YP_007866474.1|	-	0.0098	15.7	2.0	0.066	13.0	0.1	2.2	1	1	1	2	2	2	1	B-block	binding	subunit	of	TFIIIC
SgrR_N	PF12793.2	gi|479326419|ref|YP_007866474.1|	-	0.01	15.8	0.0	0.015	15.3	0.0	1.2	1	0	0	1	1	1	0	Sugar	transport-related	sRNA	regulator	N-term
Replic_Relax	PF13814.1	gi|479326419|ref|YP_007866474.1|	-	0.012	15.5	0.0	0.014	15.2	0.0	1.1	1	0	0	1	1	1	0	Replication-relaxation
RPA_C	PF08784.6	gi|479326419|ref|YP_007866474.1|	-	0.023	15.0	0.0	0.034	14.5	0.0	1.2	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
Ribosomal_S19e	PF01090.14	gi|479326419|ref|YP_007866474.1|	-	0.025	14.0	0.0	0.036	13.5	0.0	1.1	1	0	0	1	1	1	0	Ribosomal	protein	S19e
FeoC	PF09012.5	gi|479326419|ref|YP_007866474.1|	-	0.028	14.0	0.0	0.04	13.6	0.0	1.2	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
DUF3116	PF11313.3	gi|479326419|ref|YP_007866474.1|	-	0.032	13.8	0.6	0.059	12.9	0.4	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3116)
DUF4393	PF14337.1	gi|479326419|ref|YP_007866474.1|	-	0.033	13.6	0.3	0.041	13.3	0.2	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4393)
HTH_29	PF13551.1	gi|479326419|ref|YP_007866474.1|	-	0.034	14.2	0.0	0.044	13.9	0.0	1.2	1	0	0	1	1	1	0	Winged	helix-turn	helix
Sigma70_r4	PF04545.11	gi|479326419|ref|YP_007866474.1|	-	0.057	12.7	0.3	0.59	9.4	0.1	2.1	2	0	0	2	2	2	0	Sigma-70,	region	4
HTH_28	PF13518.1	gi|479326419|ref|YP_007866474.1|	-	0.068	13.1	0.0	0.11	12.5	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
EAP30	PF04157.11	gi|479326419|ref|YP_007866474.1|	-	0.074	12.2	0.0	0.093	11.8	0.0	1.1	1	0	0	1	1	1	0	EAP30/Vps36	family
Mrr_N	PF14338.1	gi|479326419|ref|YP_007866474.1|	-	0.1	12.7	0.0	0.14	12.2	0.0	1.3	1	0	0	1	1	1	0	Mrr	N-terminal	domain
TFIIE_alpha	PF02002.12	gi|479326419|ref|YP_007866474.1|	-	0.1	12.0	0.5	0.15	11.5	0.4	1.4	1	0	0	1	1	1	0	TFIIE	alpha	subunit
2-Hacid_dh_C	PF02826.14	gi|479326420|ref|YP_007866475.1|	-	1.1e-31	109.3	0.0	1.6e-31	108.8	0.0	1.2	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.25	gi|479326420|ref|YP_007866475.1|	-	4.2e-18	65.1	0.0	5e-18	64.8	0.0	1.0	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
NAD_binding_7	PF13241.1	gi|479326420|ref|YP_007866475.1|	-	0.025	14.8	0.5	1.3	9.3	0.1	2.5	2	1	0	2	2	2	0	Putative	NAD(P)-binding
IlvN	PF07991.7	gi|479326420|ref|YP_007866475.1|	-	0.12	11.7	0.1	1.3	8.3	0.0	2.2	2	0	0	2	2	2	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
DUF2299	PF10061.4	gi|479326421|ref|YP_007866476.1|	-	1.1e-52	177.1	0.0	1.2e-52	176.9	0.0	1.0	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2299)
AA_permease_2	PF13520.1	gi|479326423|ref|YP_007866478.1|	-	3.7e-18	65.2	47.8	3.7e-18	65.2	33.1	1.9	1	1	1	2	2	2	1	Amino	acid	permease
AA_permease	PF00324.16	gi|479326423|ref|YP_007866478.1|	-	3e-17	62.1	43.4	3e-17	62.1	30.1	1.9	1	1	1	2	2	2	1	Amino	acid	permease
Usp	PF00582.21	gi|479326424|ref|YP_007866479.1|	-	1.6e-27	96.4	0.1	1.7e-27	96.2	0.1	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
SapB_1	PF05184.10	gi|479326424|ref|YP_007866479.1|	-	0.16	11.8	2.0	0.34	10.8	0.2	2.3	2	0	0	2	2	2	0	Saposin-like	type	B,	region	1
Pkinase	PF00069.20	gi|479326425|ref|YP_007866480.1|	-	3e-28	98.6	0.0	4.7e-28	98.0	0.0	1.2	1	0	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|479326425|ref|YP_007866480.1|	-	1.7e-09	37.1	0.0	3.5e-09	36.1	0.0	1.5	1	0	0	1	1	1	1	Protein	tyrosine	kinase
DUF1955	PF09205.5	gi|479326425|ref|YP_007866480.1|	-	7.1	6.1	11.1	1.4e+02	1.9	7.7	2.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1955)
Sugar_tr	PF00083.19	gi|479326427|ref|YP_007866482.1|	-	7.3e-51	173.1	21.5	8.3e-51	172.9	14.9	1.0	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|479326427|ref|YP_007866482.1|	-	1.2e-28	99.8	34.9	7.8e-27	93.8	22.2	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_2	PF13347.1	gi|479326427|ref|YP_007866482.1|	-	8e-05	21.2	5.4	8e-05	21.2	3.7	3.2	1	1	2	3	3	3	2	MFS/sugar	transport	protein
OATP	PF03137.15	gi|479326427|ref|YP_007866482.1|	-	0.47	8.4	6.1	0.45	8.5	0.2	2.5	1	1	1	2	2	2	0	Organic	Anion	Transporter	Polypeptide	(OATP)	family
BT1	PF03092.11	gi|479326427|ref|YP_007866482.1|	-	1.1	7.8	11.3	15	4.1	7.8	2.4	1	1	0	1	1	1	0	BT1	family
Sorting_nexin	PF03700.8	gi|479326428|ref|YP_007866483.1|	-	0.11	12.6	0.0	0.14	12.2	0.0	1.2	1	0	0	1	1	1	0	Sorting	nexin,	N-terminal	domain
ATP-cone	PF03477.11	gi|479326429|ref|YP_007866484.1|	-	6.6e-05	23.2	0.1	8.7e-05	22.8	0.1	1.2	1	1	0	1	1	1	1	ATP	cone	domain
Imm31	PF15595.1	gi|479326431|ref|YP_007866486.1|	-	0.0048	16.6	0.5	0.012	15.3	0.3	1.6	1	1	0	1	1	1	1	Immunity	protein	31
IF2_N	PF04760.10	gi|479326431|ref|YP_007866486.1|	-	0.06	13.0	0.7	8.5	6.1	0.0	2.6	2	0	0	2	2	2	0	Translation	initiation	factor	IF-2,	N-terminal	region
PIN	PF01850.16	gi|479326432|ref|YP_007866487.1|	-	1.5e-09	38.2	0.0	1.6e-09	38.1	0.0	1.0	1	0	0	1	1	1	1	PIN	domain
PIN	PF01850.16	gi|479326433|ref|YP_007866488.1|	-	0.064	13.5	0.2	0.092	13.0	0.1	1.2	1	0	0	1	1	1	0	PIN	domain
Antitoxin-MazE	PF04014.13	gi|479326434|ref|YP_007866489.1|	-	2.2e-13	49.5	0.2	3.4e-13	49.0	0.2	1.2	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
SymE_toxin	PF08845.5	gi|479326434|ref|YP_007866489.1|	-	0.0046	16.7	0.1	0.0073	16.1	0.0	1.3	1	0	0	1	1	1	1	Toxin	SymE,	type	I	toxin-antitoxin	system
Rap1-DNA-bind	PF09197.5	gi|479326435|ref|YP_007866490.1|	-	0.0073	16.8	1.2	0.0082	16.6	0.8	1.1	1	0	0	1	1	1	1	Rap1,	DNA-binding
RHH_1	PF01402.16	gi|479326435|ref|YP_007866490.1|	-	0.15	11.9	0.3	0.15	11.9	0.2	3.0	3	1	0	3	3	3	0	Ribbon-helix-helix	protein,	copG	family
Post_transc_reg	PF13797.1	gi|479326435|ref|YP_007866490.1|	-	0.55	9.8	4.1	1	8.9	2.8	1.7	1	1	0	1	1	1	0	Post-transcriptional	regulator
PIN	PF01850.16	gi|479326436|ref|YP_007866491.1|	-	1.3e-09	38.3	0.1	1.5e-09	38.2	0.0	1.0	1	0	0	1	1	1	1	PIN	domain
TaqI_C	PF12950.2	gi|479326437|ref|YP_007866492.1|	-	0.059	13.1	0.2	0.07	12.8	0.1	1.1	1	0	0	1	1	1	0	TaqI-like	C-terminal	specificity	domain
HxlR	PF01638.12	gi|479326438|ref|YP_007866493.1|	-	3.6e-22	77.8	0.4	4.7e-22	77.4	0.3	1.2	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_34	PF13601.1	gi|479326438|ref|YP_007866493.1|	-	0.00011	22.1	0.2	0.00027	20.9	0.1	1.7	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_36	PF13730.1	gi|479326438|ref|YP_007866493.1|	-	0.0012	18.8	0.1	0.0024	17.9	0.1	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|479326438|ref|YP_007866493.1|	-	0.0013	18.3	0.1	0.0025	17.4	0.0	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_27	PF13463.1	gi|479326438|ref|YP_007866493.1|	-	0.0022	18.3	0.1	0.0066	16.7	0.1	1.8	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
PadR	PF03551.9	gi|479326438|ref|YP_007866493.1|	-	0.0029	17.3	0.2	0.0041	16.8	0.1	1.2	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
MarR	PF01047.17	gi|479326438|ref|YP_007866493.1|	-	0.0031	17.1	0.4	0.0062	16.2	0.1	1.7	2	0	0	2	2	2	1	MarR	family
HTH_45	PF14947.1	gi|479326438|ref|YP_007866493.1|	-	0.0035	17.1	0.2	0.0055	16.4	0.2	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_20	PF12840.2	gi|479326438|ref|YP_007866493.1|	-	0.0043	16.8	0.0	0.011	15.5	0.0	1.6	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|479326438|ref|YP_007866493.1|	-	0.005	16.1	0.2	0.0088	15.4	0.2	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
DUF505	PF04458.7	gi|479326438|ref|YP_007866493.1|	-	0.0073	14.4	0.1	0.0073	14.4	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF505)
TrmB	PF01978.14	gi|479326438|ref|YP_007866493.1|	-	0.022	14.4	0.1	0.033	13.8	0.1	1.3	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
ALS_ss_C	PF10369.4	gi|479326438|ref|YP_007866493.1|	-	0.033	13.9	0.1	1.1	9.0	0.0	2.3	1	1	1	2	2	2	0	Small	subunit	of	acetolactate	synthase
RepL	PF05732.6	gi|479326438|ref|YP_007866493.1|	-	0.044	12.9	0.0	0.046	12.9	0.0	1.2	1	0	0	1	1	1	0	Firmicute	plasmid	replication	protein	(RepL)
Sulfolobus_pRN	PF05584.6	gi|479326438|ref|YP_007866493.1|	-	0.053	13.4	0.2	0.097	12.6	0.1	1.5	1	0	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
LexA_DNA_bind	PF01726.11	gi|479326438|ref|YP_007866493.1|	-	0.057	12.9	0.1	0.11	12.1	0.0	1.4	1	0	0	1	1	1	0	LexA	DNA	binding	domain
PolyA_pol_RNAbd	PF12627.2	gi|479326438|ref|YP_007866493.1|	-	0.11	12.0	0.8	1.2	8.8	0.0	2.2	2	0	0	2	2	2	0	Probable	RNA	and	SrmB-	binding	site	of	polymerase	A
NSs	PF11073.3	gi|479326439|ref|YP_007866494.1|	-	0.0089	15.3	0.0	0.015	14.5	0.0	1.3	1	0	0	1	1	1	1	Rift	valley	fever	virus	non	structural	protein	(NSs)	like
CBS	PF00571.23	gi|479326440|ref|YP_007866495.1|	-	1.6e-32	111.0	3.4	1e-16	60.4	0.3	2.0	2	0	0	2	2	2	2	CBS	domain
IF3_N	PF05198.11	gi|479326440|ref|YP_007866495.1|	-	0.00036	20.4	2.6	0.043	13.7	0.1	3.0	2	2	1	3	3	3	2	Translation	initiation	factor	IF-3,	N-terminal	domain
DUF1840	PF08895.6	gi|479326440|ref|YP_007866495.1|	-	0.057	13.4	0.7	0.47	10.4	0.1	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1840)
NUMOD1	PF07453.8	gi|479326440|ref|YP_007866495.1|	-	0.066	13.0	0.9	13	5.8	0.0	2.5	2	0	0	2	2	2	0	NUMOD1	domain
UPF0066	PF01980.11	gi|479326441|ref|YP_007866496.1|	-	7.6e-34	116.2	0.0	9.6e-34	115.9	0.0	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0066
ABC_tran	PF00005.22	gi|479326442|ref|YP_007866497.1|	-	4.7e-24	85.2	0.1	7e-24	84.6	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|479326442|ref|YP_007866497.1|	-	2e-12	47.6	0.3	5.8e-08	33.0	0.0	2.5	3	0	0	3	3	3	2	AAA	domain
NB-ARC	PF00931.17	gi|479326442|ref|YP_007866497.1|	-	0.0011	17.9	0.2	0.0081	15.0	0.1	2.0	1	1	0	1	1	1	1	NB-ARC	domain
SMC_N	PF02463.14	gi|479326442|ref|YP_007866497.1|	-	0.0025	17.0	0.1	0.18	11.0	0.1	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
UPF0079	PF02367.12	gi|479326442|ref|YP_007866497.1|	-	0.0054	16.3	0.1	0.01	15.4	0.0	1.5	1	0	0	1	1	1	1	Uncharacterised	P-loop	hydrolase	UPF0079
DUF258	PF03193.11	gi|479326442|ref|YP_007866497.1|	-	0.007	15.5	0.0	0.012	14.8	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_13	PF13166.1	gi|479326442|ref|YP_007866497.1|	-	0.0072	14.8	0.1	0.012	14.0	0.1	1.3	1	0	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|479326442|ref|YP_007866497.1|	-	0.0075	16.4	0.1	0.019	15.1	0.1	1.7	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_15	PF13175.1	gi|479326442|ref|YP_007866497.1|	-	0.012	14.7	0.1	1.5	7.7	0.0	2.2	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_18	PF13238.1	gi|479326442|ref|YP_007866497.1|	-	0.015	15.6	0.1	0.026	14.8	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_29	PF13555.1	gi|479326442|ref|YP_007866497.1|	-	0.015	14.8	0.1	0.026	14.0	0.1	1.3	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.1	gi|479326442|ref|YP_007866497.1|	-	0.016	15.3	0.0	0.036	14.2	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
PduV-EutP	PF10662.4	gi|479326442|ref|YP_007866497.1|	-	0.024	14.1	0.0	0.043	13.3	0.0	1.4	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
IstB_IS21	PF01695.12	gi|479326442|ref|YP_007866497.1|	-	0.025	14.0	0.1	0.069	12.5	0.0	1.7	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA_23	PF13476.1	gi|479326442|ref|YP_007866497.1|	-	0.03	14.6	0.5	0.06	13.6	0.1	1.7	1	1	1	2	2	2	0	AAA	domain
Zeta_toxin	PF06414.7	gi|479326442|ref|YP_007866497.1|	-	0.033	13.2	0.0	0.05	12.6	0.0	1.2	1	0	0	1	1	1	0	Zeta	toxin
PhoH	PF02562.11	gi|479326442|ref|YP_007866497.1|	-	0.075	12.2	0.1	0.17	11.1	0.0	1.6	1	0	0	1	1	1	0	PhoH-like	protein
SbcCD_C	PF13558.1	gi|479326442|ref|YP_007866497.1|	-	0.1	12.5	0.0	0.86	9.5	0.0	2.1	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_17	PF13207.1	gi|479326442|ref|YP_007866497.1|	-	0.11	13.3	0.3	0.21	12.4	0.2	1.9	1	1	0	1	1	1	0	AAA	domain
NACHT	PF05729.7	gi|479326442|ref|YP_007866497.1|	-	0.13	11.8	0.6	0.55	9.8	0.1	2.1	2	1	0	2	2	2	0	NACHT	domain
AAA_16	PF13191.1	gi|479326442|ref|YP_007866497.1|	-	0.14	12.1	0.2	0.16	11.9	0.1	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
ABC2_membrane_3	PF12698.2	gi|479326443|ref|YP_007866498.1|	-	2.8e-06	26.6	31.2	2.8e-06	26.6	21.6	1.5	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
ABC2_membrane	PF01061.19	gi|479326443|ref|YP_007866498.1|	-	2.3e-05	23.6	24.8	2.3e-05	23.6	17.2	2.3	1	1	1	2	2	2	1	ABC-2	type	transporter
UPF0547	PF10571.4	gi|479326444|ref|YP_007866499.1|	-	3.7e-09	36.1	4.0	5.2e-09	35.6	2.8	1.3	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
zf-ribbon_3	PF13248.1	gi|479326444|ref|YP_007866499.1|	-	1.4e-05	24.0	14.6	0.00033	19.7	5.1	2.1	1	1	1	2	2	2	2	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|479326444|ref|YP_007866499.1|	-	0.00012	21.6	1.7	0.00022	20.8	1.2	1.5	1	0	0	1	1	1	1	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|479326444|ref|YP_007866499.1|	-	0.00013	21.3	3.2	0.15	11.5	0.2	2.4	2	0	0	2	2	2	2	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|479326444|ref|YP_007866499.1|	-	0.00013	21.4	1.8	0.00025	20.5	1.3	1.5	1	1	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|479326444|ref|YP_007866499.1|	-	0.00038	20.2	0.3	0.00059	19.5	0.2	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
Zn-ribbon_8	PF09723.5	gi|479326444|ref|YP_007866499.1|	-	0.00039	20.3	0.5	0.00069	19.5	0.3	1.4	1	0	0	1	1	1	1	Zinc	ribbon	domain
Nudix_N_2	PF14803.1	gi|479326444|ref|YP_007866499.1|	-	0.0013	18.3	1.7	0.0022	17.6	1.1	1.5	1	1	0	1	1	1	1	Nudix	N-terminal
zf-tcix	PF14952.1	gi|479326444|ref|YP_007866499.1|	-	0.0014	17.9	4.1	0.08	12.2	0.0	2.2	2	0	0	2	2	2	1	Putative	treble-clef,	zinc-finger,	Zn-binding
zf-H2C2_2	PF13465.1	gi|479326444|ref|YP_007866499.1|	-	0.002	18.3	2.9	0.22	11.8	0.1	2.3	2	0	0	2	2	2	1	Zinc-finger	double	domain
OrfB_Zn_ribbon	PF07282.6	gi|479326444|ref|YP_007866499.1|	-	0.002	17.7	2.0	0.003	17.1	1.0	1.5	1	1	0	1	1	1	1	Putative	transposase	DNA-binding	domain
TF_Zn_Ribbon	PF08271.7	gi|479326444|ref|YP_007866499.1|	-	0.0025	17.0	5.1	0.017	14.4	3.6	2.0	1	1	0	1	1	1	1	TFIIB	zinc-binding
DUF2387	PF09526.5	gi|479326444|ref|YP_007866499.1|	-	0.0029	17.4	1.2	0.0032	17.3	0.8	1.2	1	1	0	1	1	1	1	Probable	metal-binding	protein	(DUF2387)
zf-C4_Topoisom	PF01396.14	gi|479326444|ref|YP_007866499.1|	-	0.0036	16.7	1.1	0.99	8.9	0.1	2.2	2	0	0	2	2	2	1	Topoisomerase	DNA	binding	C4	zinc	finger
zf-TFIIB	PF13453.1	gi|479326444|ref|YP_007866499.1|	-	0.0043	16.2	0.3	0.0066	15.6	0.2	1.3	1	0	0	1	1	1	1	Transcription	factor	zinc-finger
A2L_zn_ribbon	PF08792.5	gi|479326444|ref|YP_007866499.1|	-	0.0044	16.4	0.5	2.2	7.8	0.0	2.3	2	0	0	2	2	2	1	A2L	zinc	ribbon	domain
ADK_lid	PF05191.9	gi|479326444|ref|YP_007866499.1|	-	0.0045	16.6	5.1	0.019	14.6	3.4	2.0	1	1	1	2	2	2	1	Adenylate	kinase,	active	site	lid
RNA_POL_M_15KD	PF02150.11	gi|479326444|ref|YP_007866499.1|	-	0.0058	16.2	1.1	0.015	14.9	0.8	1.8	1	1	0	1	1	1	1	RNA	polymerases	M/15	Kd	subunit
zf-FPG_IleRS	PF06827.9	gi|479326444|ref|YP_007866499.1|	-	0.0059	16.2	0.5	1.7	8.3	0.1	2.2	2	0	0	2	2	2	1	Zinc	finger	found	in	FPG	and	IleRS
Elf1	PF05129.8	gi|479326444|ref|YP_007866499.1|	-	0.0071	16.0	0.6	0.0077	15.9	0.4	1.2	1	0	0	1	1	1	1	Transcription	elongation	factor	Elf1	like
YhfH	PF14149.1	gi|479326444|ref|YP_007866499.1|	-	0.0082	15.9	4.4	1.1	9.1	0.2	2.3	1	1	1	2	2	2	2	YhfH-like	protein
DUF2072	PF09845.4	gi|479326444|ref|YP_007866499.1|	-	0.013	15.3	1.1	0.021	14.7	0.7	1.4	1	1	0	1	1	1	0	Zn-ribbon	containing	protein	(DUF2072)
zf-ISL3	PF14690.1	gi|479326444|ref|YP_007866499.1|	-	0.019	15.0	4.7	0.86	9.6	0.5	2.2	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-CSL	PF05207.8	gi|479326444|ref|YP_007866499.1|	-	0.025	14.0	0.2	0.038	13.5	0.1	1.3	1	0	0	1	1	1	0	CSL	zinc	finger
Zn_Tnp_IS1595	PF12760.2	gi|479326444|ref|YP_007866499.1|	-	0.034	13.9	4.7	2	8.2	0.2	2.2	1	1	0	2	2	2	0	Transposase	zinc-ribbon	domain
Lar_restr_allev	PF14354.1	gi|479326444|ref|YP_007866499.1|	-	0.035	14.4	0.9	0.051	13.8	0.6	1.4	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
Auto_anti-p27	PF06677.7	gi|479326444|ref|YP_007866499.1|	-	0.038	13.7	2.9	1	9.1	3.1	2.0	1	1	1	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
RE_Alw26IDE	PF09665.5	gi|479326444|ref|YP_007866499.1|	-	0.039	12.6	0.3	0.038	12.7	0.2	1.0	1	0	0	1	1	1	0	Type	II	restriction	endonuclease	(RE_Alw26IDE)
NMD3	PF04981.8	gi|479326444|ref|YP_007866499.1|	-	0.045	12.8	0.4	0.049	12.7	0.2	1.2	1	0	0	1	1	1	0	NMD3	family
zf-C2H2	PF00096.21	gi|479326444|ref|YP_007866499.1|	-	0.046	14.0	4.5	2.9	8.3	0.2	2.7	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
DUF1610	PF07754.6	gi|479326444|ref|YP_007866499.1|	-	0.046	13.8	9.9	0.71	10.0	1.0	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
HypA	PF01155.14	gi|479326444|ref|YP_007866499.1|	-	0.048	13.3	0.2	0.055	13.1	0.2	1.2	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
Rubredoxin	PF00301.15	gi|479326444|ref|YP_007866499.1|	-	0.05	13.4	1.4	1.1	9.2	0.0	2.2	2	0	0	2	2	2	0	Rubredoxin
zf-NADH-PPase	PF09297.6	gi|479326444|ref|YP_007866499.1|	-	0.053	13.0	0.9	5.1	6.7	0.0	2.3	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
zf-RING_3	PF14369.1	gi|479326444|ref|YP_007866499.1|	-	0.053	13.5	3.9	0.66	10.0	2.8	2.1	1	1	1	2	2	2	0	zinc-finger
Ogr_Delta	PF04606.7	gi|479326444|ref|YP_007866499.1|	-	0.056	13.1	0.4	9.4	5.9	0.0	2.4	2	0	0	2	2	2	0	Ogr/Delta-like	zinc	finger
DUF1272	PF06906.6	gi|479326444|ref|YP_007866499.1|	-	0.069	13.0	0.5	2.5	8.0	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1272)
zf-C2H2_4	PF13894.1	gi|479326444|ref|YP_007866499.1|	-	0.077	13.3	1.7	11	6.6	0.0	2.4	2	1	0	2	2	2	0	C2H2-type	zinc	finger
FYVE	PF01363.16	gi|479326444|ref|YP_007866499.1|	-	0.089	12.6	1.4	0.4	10.6	1.0	1.9	1	1	0	1	1	1	0	FYVE	zinc	finger
DUF35_N	PF12172.3	gi|479326444|ref|YP_007866499.1|	-	0.095	12.6	0.9	11	6.0	0.0	2.2	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
RNHCP	PF12647.2	gi|479326444|ref|YP_007866499.1|	-	0.097	12.5	0.2	0.099	12.4	0.1	1.3	1	0	0	1	1	1	0	RNHCP	domain
IBR	PF01485.16	gi|479326444|ref|YP_007866499.1|	-	0.1	12.5	2.2	0.38	10.6	1.5	1.8	1	1	1	2	2	2	0	IBR	domain
zf-C2H2_3	PF13878.1	gi|479326444|ref|YP_007866499.1|	-	0.15	11.6	2.0	8.7	6.0	0.0	2.2	2	0	0	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
zf-MYND	PF01753.13	gi|479326444|ref|YP_007866499.1|	-	0.15	11.9	0.7	0.27	11.1	0.5	1.4	1	1	0	1	1	1	0	MYND	finger
Spt4	PF06093.8	gi|479326444|ref|YP_007866499.1|	-	0.15	11.9	1.0	0.44	10.4	0.6	1.8	1	1	0	1	1	1	0	Spt4/RpoE2	zinc	finger
FYDLN_acid	PF09538.5	gi|479326444|ref|YP_007866499.1|	-	0.16	12.5	1.9	4.2	7.9	1.3	2.1	1	1	0	1	1	1	0	Protein	of	unknown	function	(FYDLN_acid)
Glutaredoxin	PF00462.19	gi|479326444|ref|YP_007866499.1|	-	0.2	11.6	2.3	0.57	10.2	1.6	1.9	1	1	0	1	1	1	0	Glutaredoxin
zf-LITAF-like	PF10601.4	gi|479326444|ref|YP_007866499.1|	-	0.23	11.3	3.3	4.6	7.1	0.1	2.1	1	1	1	2	2	2	0	LITAF-like	zinc	ribbon	domain
DUF329	PF03884.9	gi|479326444|ref|YP_007866499.1|	-	0.24	10.9	4.8	1.3	8.6	0.2	2.4	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF329)
Cys_rich_CPXG	PF14255.1	gi|479326444|ref|YP_007866499.1|	-	0.25	11.2	2.8	4.3	7.2	1.8	2.1	1	1	1	2	2	2	0	Cysteine-rich	CPXCG
COX5B	PF01215.14	gi|479326444|ref|YP_007866499.1|	-	0.28	10.8	2.6	1.9	8.1	1.8	1.9	1	1	0	1	1	1	0	Cytochrome	c	oxidase	subunit	Vb
CpXC	PF14353.1	gi|479326444|ref|YP_007866499.1|	-	0.31	10.9	3.3	4.2	7.3	0.1	2.3	1	1	1	2	2	2	0	CpXC	protein
zf-C2HC5	PF06221.8	gi|479326444|ref|YP_007866499.1|	-	0.36	10.6	2.3	1.9	8.2	1.6	1.9	1	1	1	2	2	2	0	Putative	zinc	finger	motif,	C2HC5-type
TFIIS_C	PF01096.13	gi|479326444|ref|YP_007866499.1|	-	0.43	10.2	3.8	10	5.8	0.1	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zf-Mss51	PF13824.1	gi|479326444|ref|YP_007866499.1|	-	0.72	9.7	2.8	19	5.2	2.1	2.2	1	1	0	1	1	1	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
DNA_RNApol_7kD	PF03604.8	gi|479326444|ref|YP_007866499.1|	-	1	8.8	3.6	6.3	6.3	2.5	2.0	1	1	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-AN1	PF01428.11	gi|479326444|ref|YP_007866499.1|	-	1.2	9.0	3.6	5.8	6.8	2.5	1.9	1	1	1	2	2	2	0	AN1-like	Zinc	finger
Sgf11	PF08209.6	gi|479326444|ref|YP_007866499.1|	-	1.5	8.1	5.1	12	5.3	0.2	2.2	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
zf-IS66	PF13005.2	gi|479326444|ref|YP_007866499.1|	-	1.7	8.6	6.3	3.4	7.7	0.3	2.3	1	1	1	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
Ribosomal_S27	PF01599.14	gi|479326444|ref|YP_007866499.1|	-	1.7	8.5	5.4	8.5	6.2	3.3	2.2	1	1	1	2	2	2	0	Ribosomal	protein	S27a
zf-CCHC	PF00098.18	gi|479326444|ref|YP_007866499.1|	-	1.8	8.6	8.8	2.1	8.4	0.4	2.2	2	0	0	2	2	2	0	Zinc	knuckle
Desulfoferrod_N	PF06397.7	gi|479326444|ref|YP_007866499.1|	-	4.5	6.7	6.9	1.5	8.2	0.4	2.2	2	0	0	2	2	2	0	Desulfoferrodoxin,	N-terminal	domain
DUF1936	PF09151.5	gi|479326444|ref|YP_007866499.1|	-	8.7	5.9	8.3	1.4e+02	2.1	5.7	2.2	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1936)
FBD	PF08387.5	gi|479326445|ref|YP_007866500.1|	-	0.011	15.1	0.4	0.1	12.0	0.1	2.2	1	1	1	2	2	2	0	FBD
NUDIX	PF00293.23	gi|479326446|ref|YP_007866501.1|	-	5.7e-19	68.0	0.0	7.5e-19	67.7	0.0	1.1	1	0	0	1	1	1	1	NUDIX	domain
NUDIX_4	PF14815.1	gi|479326446|ref|YP_007866501.1|	-	0.012	14.9	0.0	0.019	14.4	0.0	1.4	1	1	0	1	1	1	0	NUDIX	domain
HTH_44	PF14641.1	gi|479326449|ref|YP_007866504.1|	-	0.061	13.3	0.1	0.092	12.7	0.1	1.3	1	0	0	1	1	1	0	Helix-turn-helix	DNA-binding	domain	of	SPT6
FAD_binding_4	PF01565.18	gi|479326450|ref|YP_007866505.1|	-	9.5e-22	76.9	0.0	1.7e-21	76.1	0.0	1.4	1	0	0	1	1	1	1	FAD	binding	domain
FAD-oxidase_C	PF02913.14	gi|479326450|ref|YP_007866505.1|	-	0.0037	16.6	0.0	0.0064	15.8	0.0	1.4	1	0	0	1	1	1	1	FAD	linked	oxidases,	C-terminal	domain
BBE	PF08031.7	gi|479326450|ref|YP_007866505.1|	-	0.025	14.5	0.1	0.057	13.3	0.0	1.6	1	0	0	1	1	1	0	Berberine	and	berberine	like
FAD-oxidase_C	PF02913.14	gi|479326451|ref|YP_007866506.1|	-	1.1e-61	208.3	0.0	1.5e-61	207.8	0.0	1.2	1	0	0	1	1	1	1	FAD	linked	oxidases,	C-terminal	domain
FAD_binding_4	PF01565.18	gi|479326451|ref|YP_007866506.1|	-	1.1e-33	115.6	0.0	2.3e-33	114.5	0.0	1.6	1	0	0	1	1	1	1	FAD	binding	domain
Fer4_7	PF12838.2	gi|479326452|ref|YP_007866507.1|	-	7.5e-11	42.2	8.4	1.8e-10	41.0	5.9	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|479326452|ref|YP_007866507.1|	-	1.3e-10	41.4	6.1	4.2e-10	39.8	4.3	2.0	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
CCG	PF02754.11	gi|479326452|ref|YP_007866507.1|	-	1.8e-10	40.6	9.4	2.3e-06	27.4	0.0	2.8	3	0	0	3	3	2	2	Cysteine-rich	domain
Fer4_8	PF13183.1	gi|479326452|ref|YP_007866507.1|	-	4.5e-10	39.3	7.1	1.9e-09	37.3	5.1	2.0	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|479326452|ref|YP_007866507.1|	-	1.1e-07	31.5	2.7	0.0022	17.7	0.0	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|479326452|ref|YP_007866507.1|	-	3.4e-07	29.5	11.6	0.00072	19.0	1.3	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|479326452|ref|YP_007866507.1|	-	6.1e-05	22.7	14.0	0.009	15.8	1.8	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|479326452|ref|YP_007866507.1|	-	0.00066	19.8	13.3	0.00068	19.8	7.1	2.6	2	1	1	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|479326452|ref|YP_007866507.1|	-	0.0023	17.7	15.1	0.044	13.6	2.4	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|479326452|ref|YP_007866507.1|	-	0.0025	18.0	12.0	0.24	11.8	1.9	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|479326452|ref|YP_007866507.1|	-	0.0027	18.1	11.0	0.15	12.4	0.3	3.1	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|479326452|ref|YP_007866507.1|	-	0.0042	17.7	10.6	0.027	15.1	6.3	2.8	2	1	1	3	3	2	2	4Fe-4S	double	cluster	binding	domain
Colicin	PF01024.14	gi|479326452|ref|YP_007866507.1|	-	0.013	15.0	0.5	0.25	10.9	0.1	2.3	2	0	0	2	2	2	0	Colicin	pore	forming	domain
Fer4_21	PF14697.1	gi|479326452|ref|YP_007866507.1|	-	0.049	13.4	12.3	0.46	10.3	8.5	2.4	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|479326452|ref|YP_007866507.1|	-	0.055	13.8	5.5	1.3	9.5	0.1	2.5	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
DUF309	PF03745.9	gi|479326452|ref|YP_007866507.1|	-	0.057	12.8	0.0	0.15	11.5	0.0	1.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF309)
Fer4_15	PF13459.1	gi|479326452|ref|YP_007866507.1|	-	0.088	13.3	5.4	4.7	7.8	0.2	2.6	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_3	PF12798.2	gi|479326452|ref|YP_007866507.1|	-	1.1	10.0	20.6	0.53	10.9	3.0	2.9	3	0	0	3	3	2	0	4Fe-4S	binding	domain
Fer4_20	PF14691.1	gi|479326452|ref|YP_007866507.1|	-	2.3	7.8	7.3	0.33	10.5	0.1	2.8	3	0	0	3	3	3	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
BPL_LplA_LipB	PF03099.14	gi|479326453|ref|YP_007866508.1|	-	7.4e-14	51.8	0.0	1.5e-13	50.8	0.0	1.5	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
Radical_SAM	PF04055.16	gi|479326454|ref|YP_007866509.1|	-	7.6e-15	55.4	0.2	2.7e-14	53.6	0.1	1.9	1	1	1	2	2	2	2	Radical	SAM	superfamily
Biotin_lipoyl	PF00364.17	gi|479326455|ref|YP_007866510.1|	-	9.2e-14	50.8	2.8	1.2e-13	50.5	1.9	1.1	1	0	0	1	1	1	1	Biotin-requiring	enzyme
Biotin_lipoyl_2	PF13533.1	gi|479326455|ref|YP_007866510.1|	-	1.4e-09	37.4	2.8	0.00026	20.5	0.1	2.1	1	1	1	2	2	2	2	Biotin-lipoyl	like
HlyD	PF00529.15	gi|479326455|ref|YP_007866510.1|	-	6.3e-06	25.7	2.3	0.0022	17.3	0.3	2.0	2	0	0	2	2	2	2	HlyD	family	secretion	protein
RnfC_N	PF13375.1	gi|479326455|ref|YP_007866510.1|	-	1.9e-05	24.2	0.2	0.00015	21.3	0.3	1.8	1	1	1	2	2	2	1	RnfC	Barrel	sandwich	hybrid	domain
HlyD_2	PF12700.2	gi|479326455|ref|YP_007866510.1|	-	6.1e-05	22.3	3.6	0.023	13.8	0.4	2.0	1	1	1	2	2	2	2	HlyD	family	secretion	protein
GCV_H	PF01597.14	gi|479326455|ref|YP_007866510.1|	-	0.0016	18.1	0.3	0.0018	17.9	0.2	1.2	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
PASTA	PF03793.14	gi|479326455|ref|YP_007866510.1|	-	0.0048	16.5	0.7	0.66	9.6	0.0	2.1	2	0	0	2	2	2	1	PASTA	domain
QRPTase_N	PF02749.11	gi|479326455|ref|YP_007866510.1|	-	0.0055	16.4	0.1	2.9	7.7	0.0	2.1	1	1	1	2	2	2	2	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
YonK	PF09642.5	gi|479326455|ref|YP_007866510.1|	-	0.0055	16.3	0.4	0.053	13.2	0.1	2.0	1	1	1	2	2	2	1	YonK	protein
Peptidase_M23	PF01551.17	gi|479326455|ref|YP_007866510.1|	-	0.0071	16.3	0.3	2.9	7.9	0.0	2.1	1	1	1	2	2	2	2	Peptidase	family	M23
DUF257	PF03192.8	gi|479326455|ref|YP_007866510.1|	-	0.023	13.9	1.6	0.028	13.7	1.1	1.1	1	0	0	1	1	1	0	Pyrococcus	protein	of	unknown	function,	DUF257
PTS_EIIA_1	PF00358.15	gi|479326455|ref|YP_007866510.1|	-	0.032	13.7	0.1	2	7.9	0.0	2.0	1	1	1	2	2	2	0	phosphoenolpyruvate-dependent	sugar	phosphotransferase	system,	EIIA	1
DUF2118	PF09891.4	gi|479326455|ref|YP_007866510.1|	-	0.033	13.8	0.1	0.49	10.0	0.0	1.9	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2118)
HlyD_3	PF13437.1	gi|479326455|ref|YP_007866510.1|	-	0.067	13.5	0.4	12	6.2	0.0	2.2	2	0	0	2	2	2	0	HlyD	family	secretion	protein
NQRA	PF05896.6	gi|479326455|ref|YP_007866510.1|	-	0.12	11.5	0.1	1.1	8.4	0.1	1.7	1	1	0	1	1	1	0	Na(+)-translocating	NADH-quinone	reductase	subunit	A	(NQRA)
TRAM	PF01938.15	gi|479326455|ref|YP_007866510.1|	-	0.16	11.8	1.3	3.5	7.4	0.0	2.1	2	0	0	2	2	2	0	TRAM	domain
BPL_LplA_LipB	PF03099.14	gi|479326456|ref|YP_007866511.1|	-	1.4e-16	60.6	0.2	2.1e-16	60.0	0.1	1.3	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
FMN_red	PF03358.10	gi|479326457|ref|YP_007866512.1|	-	7.3e-17	61.2	0.0	9.3e-17	60.9	0.0	1.1	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_5	PF12724.2	gi|479326457|ref|YP_007866512.1|	-	1.9e-05	24.7	0.0	3.1e-05	24.0	0.0	1.5	1	0	0	1	1	1	1	Flavodoxin	domain
Flavodoxin_2	PF02525.12	gi|479326457|ref|YP_007866512.1|	-	0.00041	19.9	0.0	0.00062	19.3	0.0	1.4	1	0	0	1	1	1	1	Flavodoxin-like	fold
Flavodoxin_1	PF00258.20	gi|479326457|ref|YP_007866512.1|	-	0.021	14.8	0.3	0.31	11.0	0.2	2.3	1	1	0	1	1	1	0	Flavodoxin
DsbD	PF02683.10	gi|479326458|ref|YP_007866513.1|	-	0.057	13.0	0.2	0.057	13.0	0.2	1.9	2	0	0	2	2	2	0	Cytochrome	C	biogenesis	protein	transmembrane	region
MARVEL	PF01284.18	gi|479326458|ref|YP_007866513.1|	-	0.22	11.3	1.9	0.23	11.2	0.5	1.5	1	1	0	1	1	1	0	Membrane-associating	domain
Paramyxo_ncap	PF00973.14	gi|479326458|ref|YP_007866513.1|	-	0.53	8.9	2.7	0.61	8.7	1.8	1.1	1	0	0	1	1	1	0	Paramyxovirus	nucleocapsid	protein
DUF1700	PF08006.6	gi|479326458|ref|YP_007866513.1|	-	0.8	8.9	4.4	0.36	10.1	1.5	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1700)
DUF624	PF04854.9	gi|479326458|ref|YP_007866513.1|	-	2.6	7.9	4.7	7.5	6.4	0.7	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function,	DUF624
DUF2583	PF10762.4	gi|479326458|ref|YP_007866513.1|	-	3.6	7.7	6.5	1.9	8.6	1.7	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2583)
DUF981	PF06168.6	gi|479326459|ref|YP_007866514.1|	-	1.1e-39	136.2	14.6	1.3e-39	135.9	10.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF981)
MFS_1	PF07690.11	gi|479326460|ref|YP_007866515.1|	-	9.6e-14	50.8	21.1	2.4e-12	46.2	10.1	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
FPN1	PF06963.7	gi|479326460|ref|YP_007866515.1|	-	0.0063	14.9	2.4	0.07	11.4	0.0	2.2	2	0	0	2	2	2	2	Ferroportin1	(FPN1)
Folate_carrier	PF01770.13	gi|479326460|ref|YP_007866515.1|	-	0.14	10.6	8.2	0.24	9.8	1.4	2.2	2	0	0	2	2	2	0	Reduced	folate	carrier
Pyr_redox	PF00070.22	gi|479326461|ref|YP_007866516.1|	-	8.4e-17	61.3	5.9	3.4e-16	59.3	0.5	2.6	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|479326461|ref|YP_007866516.1|	-	5e-10	38.8	5.8	0.00021	20.3	0.0	4.0	4	0	0	4	4	4	3	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.9	gi|479326461|ref|YP_007866516.1|	-	3.2e-09	36.9	18.2	0.0058	16.5	4.9	5.0	1	1	2	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|479326461|ref|YP_007866516.1|	-	1.1e-08	35.4	1.4	0.0014	18.7	0.0	3.3	3	1	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
3HCDH_N	PF02737.13	gi|479326461|ref|YP_007866516.1|	-	0.0044	16.7	0.0	0.0086	15.7	0.0	1.5	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Lycopene_cycl	PF05834.7	gi|479326461|ref|YP_007866516.1|	-	0.013	14.4	1.5	2	7.2	0.1	2.6	3	0	0	3	3	3	0	Lycopene	cyclase	protein
HI0933_like	PF03486.9	gi|479326461|ref|YP_007866516.1|	-	0.017	13.5	5.6	0.76	8.1	0.1	3.9	4	0	0	4	4	4	0	HI0933-like	protein
NAD_binding_8	PF13450.1	gi|479326461|ref|YP_007866516.1|	-	0.024	14.6	0.3	0.024	14.6	0.2	2.4	2	0	0	2	2	2	0	NAD(P)-binding	Rossmann-like	domain
NAD_Gly3P_dh_N	PF01210.18	gi|479326461|ref|YP_007866516.1|	-	0.032	13.9	0.0	0.11	12.1	0.0	2.0	2	0	0	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
DFP	PF04127.10	gi|479326461|ref|YP_007866516.1|	-	0.067	12.7	0.1	0.22	11.1	0.0	2.0	1	1	1	2	2	2	0	DNA	/	pantothenate	metabolism	flavoprotein
FAD_binding_3	PF01494.14	gi|479326461|ref|YP_007866516.1|	-	0.33	9.9	3.1	0.77	8.7	0.4	2.4	2	1	1	3	3	3	0	FAD	binding	domain
GIDA	PF01134.17	gi|479326461|ref|YP_007866516.1|	-	1.1	8.0	8.2	2.3	6.9	0.3	3.1	2	1	1	3	3	3	0	Glucose	inhibited	division	protein	A
MFS_1	PF07690.11	gi|479326462|ref|YP_007866517.1|	-	3.9e-23	81.7	36.5	3.9e-23	81.7	25.3	2.0	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|479326462|ref|YP_007866517.1|	-	2.1e-18	66.1	28.9	1.7e-10	40.0	2.8	2.1	1	1	1	2	2	2	2	Sugar	(and	other)	transporter
MFS_2	PF13347.1	gi|479326462|ref|YP_007866517.1|	-	4.8e-05	21.9	11.5	4.8e-05	21.9	8.0	3.2	1	1	1	3	3	3	2	MFS/sugar	transport	protein
MtrG	PF04210.8	gi|479326462|ref|YP_007866517.1|	-	1.3	8.7	6.5	8.4	6.1	0.1	3.0	2	1	0	2	2	2	0	Tetrahydromethanopterin	S-methyltransferase,	subunit	G
DUF3792	PF12670.2	gi|479326462|ref|YP_007866517.1|	-	6.9	6.5	41.9	0.053	13.3	8.8	4.8	2	2	1	3	3	3	0	Protein	of	unknown	function	(DUF3792)
PGG	PF13962.1	gi|479326462|ref|YP_007866517.1|	-	9.8	5.8	10.2	0.36	10.4	0.4	3.2	3	0	0	3	3	3	0	Domain	of	unknown	function
Acyl-CoA_dh_1	PF00441.19	gi|479326464|ref|YP_007866519.1|	-	1.3e-27	96.7	0.0	1.9e-27	96.1	0.0	1.2	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|479326464|ref|YP_007866519.1|	-	4e-15	55.0	0.0	8.4e-15	54.0	0.0	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.6	gi|479326464|ref|YP_007866519.1|	-	2.2e-09	37.6	0.0	4.1e-09	36.7	0.0	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.11	gi|479326464|ref|YP_007866519.1|	-	1.1e-07	32.4	0.0	2.2e-07	31.4	0.0	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
CoA_transf_3	PF02515.12	gi|479326465|ref|YP_007866520.1|	-	5.4e-55	185.6	0.0	8.2e-55	185.0	0.0	1.3	1	0	0	1	1	1	1	CoA-transferase	family	III
DUF2430	PF10353.4	gi|479326465|ref|YP_007866520.1|	-	0.025	14.7	0.1	0.068	13.3	0.1	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2430)
PHB_acc_N	PF07879.6	gi|479326465|ref|YP_007866520.1|	-	0.032	13.9	0.1	0.99	9.1	0.0	2.6	2	0	0	2	2	2	0	PHB/PHA	accumulation	regulator	DNA-binding	domain
Sugar_tr	PF00083.19	gi|479326466|ref|YP_007866521.1|	-	4.3e-36	124.4	26.3	5.1e-36	124.2	18.2	1.0	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|479326466|ref|YP_007866521.1|	-	8.1e-31	107.0	49.7	1.3e-27	96.4	21.7	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
PPR_1	PF12854.2	gi|479326466|ref|YP_007866521.1|	-	0.063	12.7	0.3	0.21	11.0	0.1	1.9	2	0	0	2	2	2	0	PPR	repeat
DUF3488	PF11992.3	gi|479326467|ref|YP_007866522.1|	-	0.012	14.2	0.9	0.026	13.1	0.6	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3488)
PsbN	PF02468.10	gi|479326467|ref|YP_007866522.1|	-	0.61	9.7	4.4	1.7	8.2	3.0	1.8	1	0	0	1	1	1	0	Photosystem	II	reaction	centre	N	protein	(psbN)
PetM	PF08041.6	gi|479326468|ref|YP_007866523.1|	-	0.33	10.4	4.5	0.95	8.9	3.1	1.7	1	0	0	1	1	1	0	PetM	family	of	cytochrome	b6f	complex	subunit	7
Class_IIIsignal	PF04021.7	gi|479326468|ref|YP_007866523.1|	-	0.92	9.3	4.6	2.4	7.9	3.2	1.7	1	0	0	1	1	1	0	Class	III	signal	peptide
Wzz	PF02706.10	gi|479326469|ref|YP_007866524.1|	-	0.025	14.3	0.8	0.063	13.1	0.2	1.9	2	0	0	2	2	2	0	Chain	length	determinant	protein
Baculo_11_kDa	PF06143.6	gi|479326470|ref|YP_007866525.1|	-	0.22	10.9	5.2	0.49	9.7	3.6	1.6	1	0	0	1	1	1	0	Baculovirus	11	kDa	family
DUF4115	PF13464.1	gi|479326470|ref|YP_007866525.1|	-	0.3	10.7	1.5	5.9	6.6	0.0	2.9	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4115)
DUF3595	PF12166.3	gi|479326471|ref|YP_007866526.1|	-	0.073	11.8	1.3	0.084	11.6	0.9	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3595)
Baculo_11_kDa	PF06143.6	gi|479326471|ref|YP_007866526.1|	-	0.19	11.1	1.0	0.37	10.1	0.7	1.5	1	0	0	1	1	1	0	Baculovirus	11	kDa	family
Rifin_STEVOR	PF02009.11	gi|479326471|ref|YP_007866526.1|	-	0.45	10.0	3.4	0.58	9.7	2.3	1.2	1	0	0	1	1	1	0	Rifin/stevor	family
MaoC_dehydratas	PF01575.14	gi|479326472|ref|YP_007866527.1|	-	5.2e-16	58.1	0.0	7e-16	57.7	0.0	1.1	1	0	0	1	1	1	1	MaoC	like	domain
FabA	PF07977.8	gi|479326472|ref|YP_007866527.1|	-	0.0019	17.7	0.0	0.0033	16.9	0.0	1.4	1	1	0	1	1	1	1	FabA-like	domain
MaoC_dehydrat_N	PF13452.1	gi|479326472|ref|YP_007866527.1|	-	0.0024	17.6	0.0	0.0047	16.7	0.0	1.5	2	0	0	2	2	2	1	N-terminal	half	of	MaoC	dehydratase
4HBT	PF03061.17	gi|479326472|ref|YP_007866527.1|	-	0.01	15.9	0.0	0.017	15.2	0.0	1.3	1	0	0	1	1	1	0	Thioesterase	superfamily
Antitoxin-MazE	PF04014.13	gi|479326473|ref|YP_007866528.1|	-	1.3e-11	43.9	1.6	2.2e-11	43.2	1.1	1.4	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
DUF104	PF01954.11	gi|479326473|ref|YP_007866528.1|	-	0.027	14.4	0.6	0.049	13.6	0.4	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF104
Methyltrans_RNA	PF04452.9	gi|479326473|ref|YP_007866528.1|	-	0.032	13.3	0.0	0.039	13.0	0.0	1.1	1	0	0	1	1	1	0	RNA	methyltransferase
PIN	PF01850.16	gi|479326474|ref|YP_007866529.1|	-	4.5e-12	46.3	0.2	5.2e-12	46.1	0.1	1.1	1	0	0	1	1	1	1	PIN	domain
Vps53_N	PF04100.7	gi|479326475|ref|YP_007866530.1|	-	0.019	13.7	0.8	0.021	13.6	0.5	1.1	1	0	0	1	1	1	0	Vps53-like,	N-terminal
DUF883	PF05957.8	gi|479326475|ref|YP_007866530.1|	-	0.025	14.9	0.3	0.028	14.8	0.2	1.2	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF883)
GlutR_dimer	PF00745.15	gi|479326475|ref|YP_007866530.1|	-	0.051	13.5	0.1	0.062	13.2	0.1	1.2	1	0	0	1	1	1	0	Glutamyl-tRNAGlu	reductase,	dimerisation	domain
ABC_trans_N	PF14510.1	gi|479326475|ref|YP_007866530.1|	-	0.056	13.5	0.1	0.066	13.3	0.1	1.1	1	0	0	1	1	1	0	ABC-transporter	extracellular	N-terminal
Laminin_I	PF06008.9	gi|479326475|ref|YP_007866530.1|	-	0.066	12.5	0.8	0.15	11.3	0.5	1.6	1	1	0	1	1	1	0	Laminin	Domain	I
Syntaxin-6_N	PF09177.6	gi|479326475|ref|YP_007866530.1|	-	0.069	13.5	0.7	0.1	13.0	0.5	1.5	1	1	0	1	1	1	0	Syntaxin	6,	N-terminal
GlnD_UR_UTase	PF08335.6	gi|479326475|ref|YP_007866530.1|	-	0.089	12.6	0.0	0.1	12.4	0.0	1.3	1	0	0	1	1	1	0	GlnD	PII-uridylyltransferase
PPR	PF01535.15	gi|479326475|ref|YP_007866530.1|	-	0.14	12.1	0.2	11	6.2	0.1	2.3	2	0	0	2	2	2	0	PPR	repeat
DUF1268	PF06896.6	gi|479326475|ref|YP_007866530.1|	-	0.18	12.1	1.2	0.24	11.7	0.9	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1268)
BLOC1_2	PF10046.4	gi|479326475|ref|YP_007866530.1|	-	0.24	11.5	2.1	0.32	11.1	1.4	1.3	1	0	0	1	1	1	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Lactamase_B	PF00753.22	gi|479326476|ref|YP_007866531.1|	-	1.1e-31	110.0	0.0	1.3e-31	109.7	0.0	1.1	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|479326476|ref|YP_007866531.1|	-	9.8e-06	25.2	0.0	1e-05	25.1	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|479326476|ref|YP_007866531.1|	-	0.026	14.2	0.0	0.038	13.7	0.0	1.4	1	1	0	1	1	1	0	Beta-lactamase	superfamily	domain
CCG	PF02754.11	gi|479326477|ref|YP_007866532.1|	-	8.6e-11	41.6	0.0	2.6e-07	30.5	0.0	2.8	3	0	0	3	3	3	2	Cysteine-rich	domain
DUF162	PF02589.10	gi|479326478|ref|YP_007866533.1|	-	2.2e-51	174.0	0.1	2.9e-51	173.7	0.1	1.1	1	0	0	1	1	1	1	Uncharacterised	ACR,	YkgG	family	COG1556
Fer4_8	PF13183.1	gi|479326478|ref|YP_007866533.1|	-	9e-11	41.6	1.9	1.5e-10	40.9	1.3	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|479326478|ref|YP_007866533.1|	-	4.1e-07	30.3	1.6	0.014	15.7	0.1	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|479326478|ref|YP_007866533.1|	-	1.2e-06	28.7	2.2	3.3e-06	27.3	1.6	1.7	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|479326478|ref|YP_007866533.1|	-	8e-06	26.1	2.7	1.6e-05	25.2	1.9	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|479326478|ref|YP_007866533.1|	-	2.1e-05	24.2	3.9	0.00011	21.8	3.0	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|479326478|ref|YP_007866533.1|	-	2.4e-05	24.5	0.9	0.041	14.1	0.1	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_20	PF14691.1	gi|479326478|ref|YP_007866533.1|	-	0.0011	18.5	0.9	0.12	12.0	0.0	2.4	2	0	0	2	2	2	1	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_6	PF12837.2	gi|479326478|ref|YP_007866533.1|	-	0.0014	18.3	8.8	0.0042	16.8	1.3	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4	PF00037.22	gi|479326478|ref|YP_007866533.1|	-	0.0028	17.2	8.8	0.0077	15.8	1.3	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|479326478|ref|YP_007866533.1|	-	0.049	14.3	6.2	0.25	12.1	4.3	2.1	1	1	0	1	1	1	0	4Fe-4S	double	cluster	binding	domain
Fer4_3	PF12798.2	gi|479326478|ref|YP_007866533.1|	-	0.15	12.7	11.0	1.9	9.2	0.4	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|479326478|ref|YP_007866533.1|	-	0.21	11.5	7.6	0.85	9.6	1.3	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|479326478|ref|YP_007866533.1|	-	0.22	11.9	7.6	0.6	10.5	1.1	2.2	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|479326478|ref|YP_007866533.1|	-	0.44	10.4	7.9	5	7.0	5.5	2.2	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
MFS_1	PF07690.11	gi|479326479|ref|YP_007866534.1|	-	4.6e-47	160.4	85.4	9.3e-42	142.9	34.5	2.6	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|479326479|ref|YP_007866534.1|	-	9.5e-13	47.5	29.9	2.8e-12	45.9	4.2	2.4	2	0	0	2	2	2	2	Sugar	(and	other)	transporter
MFS_2	PF13347.1	gi|479326479|ref|YP_007866534.1|	-	3.8e-07	28.8	44.2	3.9e-05	22.2	7.5	3.5	2	1	2	4	4	4	3	MFS/sugar	transport	protein
Raffinose_syn	PF05691.7	gi|479326480|ref|YP_007866535.1|	-	1.5e-43	148.4	4.7	5.8e-24	83.6	0.1	3.1	2	1	1	3	3	3	3	Raffinose	synthase	or	seed	imbibition	protein	Sip1
HD	PF01966.17	gi|479326481|ref|YP_007866536.1|	-	6.2e-12	45.6	0.2	1.8e-11	44.1	0.0	1.8	2	0	0	2	2	2	1	HD	domain
HDOD	PF08668.7	gi|479326481|ref|YP_007866536.1|	-	0.04	13.1	0.0	0.076	12.2	0.0	1.4	1	0	0	1	1	1	0	HDOD	domain
MR_MLE_C	PF13378.1	gi|479326482|ref|YP_007866537.1|	-	7.2e-28	96.7	0.0	1.9e-26	92.1	0.0	2.3	2	0	0	2	2	2	1	Enolase	C-terminal	domain-like
MR_MLE_N	PF02746.11	gi|479326482|ref|YP_007866537.1|	-	1.9e-19	69.7	0.0	3.9e-19	68.7	0.0	1.5	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	N-terminal	domain
MR_MLE	PF01188.16	gi|479326482|ref|YP_007866537.1|	-	6.7e-16	58.5	0.1	1.4e-15	57.5	0.1	1.6	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
Pterin_bind	PF00809.17	gi|479326482|ref|YP_007866537.1|	-	0.0099	15.2	0.0	0.039	13.3	0.0	1.8	2	0	0	2	2	2	1	Pterin	binding	enzyme
PDZ_1	PF12812.2	gi|479326483|ref|YP_007866538.1|	-	0.16	11.8	0.1	27	4.7	0.1	2.8	2	0	0	2	2	2	0	PDZ-like	domain
Sugar_tr	PF00083.19	gi|479326484|ref|YP_007866539.1|	-	7.4e-29	100.6	41.0	6.4e-21	74.4	10.1	2.0	1	1	1	2	2	2	2	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|479326484|ref|YP_007866539.1|	-	8.7e-23	80.5	53.4	8.7e-23	80.5	37.0	1.9	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
MFS_1	PF07690.11	gi|479326485|ref|YP_007866540.1|	-	1.2e-20	73.5	46.2	1.2e-20	73.5	32.0	1.7	1	1	0	1	1	1	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|479326485|ref|YP_007866540.1|	-	1.4e-17	63.4	31.2	2.6e-17	62.5	21.6	1.5	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
DUF1352	PF07086.7	gi|479326485|ref|YP_007866540.1|	-	0.061	12.9	0.1	0.061	12.9	0.1	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1352)
EpuA	PF11772.3	gi|479326485|ref|YP_007866540.1|	-	4.6	6.7	0.0	4.6	6.7	0.0	5.1	4	0	0	4	4	4	0	DNA-directed	RNA	polymerase	subunit	beta
FAA_hydrolase	PF01557.13	gi|479326486|ref|YP_007866541.1|	-	1.7e-28	99.5	0.0	2.1e-28	99.2	0.0	1.1	1	0	0	1	1	1	1	Fumarylacetoacetate	(FAA)	hydrolase	family
Aldedh	PF00171.17	gi|479326487|ref|YP_007866542.1|	-	1.9e-165	550.6	0.0	2.2e-165	550.4	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
LuxC	PF05893.9	gi|479326487|ref|YP_007866542.1|	-	2.8e-05	23.0	0.0	9.4e-05	21.3	0.0	1.7	2	0	0	2	2	2	1	Acyl-CoA	reductase	(LuxC)
DUF4325	PF14213.1	gi|479326487|ref|YP_007866542.1|	-	0.031	13.9	0.1	0.098	12.3	0.0	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4325)
DUF4355	PF14265.1	gi|479326487|ref|YP_007866542.1|	-	0.15	12.0	1.2	2.8	7.9	0.0	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4355)
Abhydrolase_6	PF12697.2	gi|479326488|ref|YP_007866543.1|	-	4e-30	105.3	0.0	4.7e-30	105.1	0.0	1.0	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|479326488|ref|YP_007866543.1|	-	9e-24	84.2	0.0	2.4e-23	82.9	0.0	1.6	1	1	0	1	1	1	1	alpha/beta	hydrolase	fold
Abhydrolase_5	PF12695.2	gi|479326488|ref|YP_007866543.1|	-	3.1e-16	59.4	0.0	2.8e-15	56.3	0.0	2.0	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Peptidase_S9	PF00326.16	gi|479326488|ref|YP_007866543.1|	-	2.7e-06	26.7	0.0	0.0044	16.2	0.0	2.2	2	0	0	2	2	2	2	Prolyl	oligopeptidase	family
Abhydrolase_2	PF02230.11	gi|479326488|ref|YP_007866543.1|	-	4e-06	26.4	0.0	2.6e-05	23.7	0.0	1.9	2	0	0	2	2	2	1	Phospholipase/Carboxylesterase
Hydrolase_4	PF12146.3	gi|479326488|ref|YP_007866543.1|	-	5.9e-06	26.0	0.0	3e-05	23.7	0.0	2.1	2	0	0	2	2	2	1	Putative	lysophospholipase
Lipase_3	PF01764.20	gi|479326488|ref|YP_007866543.1|	-	0.0002	20.9	0.0	0.00063	19.3	0.0	1.8	1	1	0	1	1	1	1	Lipase	(class	3)
Thioesterase	PF00975.15	gi|479326488|ref|YP_007866543.1|	-	0.00046	20.4	0.0	0.00063	20.0	0.0	1.3	1	0	0	1	1	1	1	Thioesterase	domain
Peptidase_S15	PF02129.13	gi|479326488|ref|YP_007866543.1|	-	0.00051	19.5	0.0	0.0025	17.2	0.0	1.8	1	1	0	1	1	1	1	X-Pro	dipeptidyl-peptidase	(S15	family)
PGAP1	PF07819.8	gi|479326488|ref|YP_007866543.1|	-	0.0011	18.6	0.0	0.0037	16.8	0.0	1.8	2	0	0	2	2	2	1	PGAP1-like	protein
Abhydrolase_3	PF07859.8	gi|479326488|ref|YP_007866543.1|	-	0.0021	17.6	0.0	0.0038	16.8	0.0	1.4	1	0	0	1	1	1	1	alpha/beta	hydrolase	fold
PAF-AH_p_II	PF03403.8	gi|479326488|ref|YP_007866543.1|	-	0.029	12.6	0.0	0.05	11.8	0.0	1.3	1	0	0	1	1	1	0	Platelet-activating	factor	acetylhydrolase,	isoform	II
Peptidase_S28	PF05577.7	gi|479326488|ref|YP_007866543.1|	-	0.032	12.8	0.0	0.049	12.2	0.0	1.2	1	0	0	1	1	1	0	Serine	carboxypeptidase	S28
DUF1749	PF08538.5	gi|479326488|ref|YP_007866543.1|	-	0.039	12.8	0.1	0.066	12.0	0.0	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1749)
Chlorophyllase	PF07224.6	gi|479326488|ref|YP_007866543.1|	-	0.053	12.3	0.0	0.072	11.8	0.0	1.2	1	0	0	1	1	1	0	Chlorophyllase
DUF1057	PF06342.7	gi|479326488|ref|YP_007866543.1|	-	0.053	12.3	1.1	0.086	11.6	0.1	1.8	2	1	0	2	2	2	0	Alpha/beta	hydrolase	of	unknown	function	(DUF1057)
BAAT_C	PF08840.6	gi|479326488|ref|YP_007866543.1|	-	0.054	13.1	0.0	0.12	12.1	0.0	1.7	1	1	0	1	1	1	0	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
Esterase	PF00756.15	gi|479326488|ref|YP_007866543.1|	-	0.068	12.5	0.0	0.099	12.0	0.0	1.3	1	0	0	1	1	1	0	Putative	esterase
Abhydrolase_8	PF06259.7	gi|479326488|ref|YP_007866543.1|	-	0.16	11.4	0.0	0.25	10.8	0.0	1.2	1	0	0	1	1	1	0	Alpha/beta	hydrolase
DUF3877	PF12993.2	gi|479326489|ref|YP_007866544.1|	-	0.025	14.1	0.3	1	8.8	0.0	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function,	E.	rectale	Gene	description	(DUF3877)
adh_short	PF00106.20	gi|479326490|ref|YP_007866545.1|	-	3.4e-33	114.9	0.1	5.1e-33	114.3	0.1	1.3	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|479326490|ref|YP_007866545.1|	-	1.2e-31	110.3	0.2	1.4e-31	110.1	0.1	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|479326490|ref|YP_007866545.1|	-	1e-13	51.3	0.0	1.4e-13	50.9	0.0	1.2	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.16	gi|479326490|ref|YP_007866545.1|	-	0.0082	15.6	0.3	0.017	14.5	0.2	1.6	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
3HCDH_N	PF02737.13	gi|479326490|ref|YP_007866545.1|	-	0.025	14.2	0.1	0.056	13.0	0.1	1.6	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
TPR_1	PF00515.23	gi|479326490|ref|YP_007866545.1|	-	0.13	11.9	0.0	0.3	10.7	0.0	1.6	1	0	0	1	1	1	0	Tetratricopeptide	repeat
Thiolase_C	PF02803.13	gi|479326491|ref|YP_007866546.1|	-	0.0005	19.5	0.2	0.0013	18.1	0.0	1.8	2	0	0	2	2	2	1	Thiolase,	C-terminal	domain
DUF35	PF01796.12	gi|479326492|ref|YP_007866547.1|	-	3.2e-07	30.4	0.0	5.3e-07	29.7	0.0	1.4	1	1	0	1	1	1	1	DUF35	OB-fold	domain
DUF35_N	PF12172.3	gi|479326492|ref|YP_007866547.1|	-	3.9e-07	29.7	0.5	6e-07	29.1	0.3	1.2	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
HypA	PF01155.14	gi|479326492|ref|YP_007866547.1|	-	0.0027	17.3	0.2	0.0068	16.0	0.1	1.6	2	0	0	2	2	2	1	Hydrogenase	expression/synthesis	hypA	family
DUF2082	PF09855.4	gi|479326492|ref|YP_007866547.1|	-	0.017	14.9	3.0	2.9	7.8	0.0	2.4	1	1	1	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
NifZ	PF04319.8	gi|479326492|ref|YP_007866547.1|	-	0.06	12.7	0.4	3.1	7.2	0.1	2.2	1	1	1	2	2	2	0	NifZ	domain
NOB1_Zn_bind	PF08772.6	gi|479326492|ref|YP_007866547.1|	-	0.086	12.6	1.2	0.14	11.9	0.4	1.7	2	0	0	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
zinc-ribbons_6	PF07191.7	gi|479326492|ref|YP_007866547.1|	-	0.098	12.4	0.0	0.17	11.7	0.0	1.4	1	0	0	1	1	1	0	zinc-ribbons
FdhE	PF04216.7	gi|479326492|ref|YP_007866547.1|	-	0.11	12.1	0.4	0.15	11.7	0.3	1.1	1	0	0	1	1	1	0	Protein	involved	in	formate	dehydrogenase	formation
zinc_ribbon_5	PF13719.1	gi|479326492|ref|YP_007866547.1|	-	0.15	11.6	2.6	1.1	8.8	0.1	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
DZR	PF12773.2	gi|479326492|ref|YP_007866547.1|	-	0.16	11.7	1.2	0.3	10.9	0.9	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
TFIIS_C	PF01096.13	gi|479326492|ref|YP_007866547.1|	-	0.18	11.4	1.4	7.3	6.3	0.0	2.3	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zinc_ribbon_4	PF13717.1	gi|479326492|ref|YP_007866547.1|	-	0.43	10.3	3.1	2.1	8.0	0.1	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
Zn-ribbon_8	PF09723.5	gi|479326492|ref|YP_007866547.1|	-	1.3	8.9	4.8	41	4.2	3.3	2.3	1	1	0	1	1	1	0	Zinc	ribbon	domain
DUF1936	PF09151.5	gi|479326492|ref|YP_007866547.1|	-	2.6	7.6	4.9	0.49	9.9	0.7	2.0	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF1936)
DUF998	PF06197.8	gi|479326494|ref|YP_007866549.1|	-	1.2e-31	109.4	13.6	1.4e-31	109.2	9.4	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF998)
Methyltransf_24	PF13578.1	gi|479326495|ref|YP_007866550.1|	-	1e-13	52.0	0.0	1.5e-13	51.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
CmcI	PF04989.7	gi|479326495|ref|YP_007866550.1|	-	1.6e-05	24.3	0.0	3.1e-05	23.3	0.0	1.4	1	1	0	1	1	1	1	Cephalosporin	hydroxylase
Glyco_trans_4_2	PF13477.1	gi|479326495|ref|YP_007866550.1|	-	0.095	12.5	0.0	0.21	11.4	0.0	1.5	1	0	0	1	1	1	0	Glycosyl	transferase	4-like
TatC	PF00902.13	gi|479326496|ref|YP_007866551.1|	-	1.8e-20	73.2	11.4	1.8e-20	73.2	7.9	1.2	1	1	0	1	1	1	1	Sec-independent	protein	translocase	protein	(TatC)
DUF2636	PF11120.3	gi|479326496|ref|YP_007866551.1|	-	0.19	11.2	0.2	0.19	11.2	0.1	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2636)
MttA_Hcf106	PF02416.11	gi|479326498|ref|YP_007866553.1|	-	2e-13	49.2	1.6	2.6e-13	48.8	1.1	1.4	1	1	0	1	1	1	1	mttA/Hcf106	family
DUF4391	PF14335.1	gi|479326498|ref|YP_007866553.1|	-	0.0042	16.5	1.8	0.0044	16.4	1.2	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4391)
DUF4446	PF14584.1	gi|479326498|ref|YP_007866553.1|	-	0.031	14.1	0.5	0.04	13.7	0.3	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4446)
Lectin_N	PF03954.9	gi|479326498|ref|YP_007866553.1|	-	0.048	13.0	0.5	0.062	12.7	0.3	1.1	1	0	0	1	1	1	0	Hepatic	lectin,	N-terminal	domain
DUF3573	PF12097.3	gi|479326498|ref|YP_007866553.1|	-	0.07	11.7	0.2	0.072	11.6	0.1	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3573)
ApoL	PF05461.6	gi|479326498|ref|YP_007866553.1|	-	0.084	12.1	1.8	0.099	11.8	1.2	1.1	1	0	0	1	1	1	0	Apolipoprotein	L
DUF4140	PF13600.1	gi|479326498|ref|YP_007866553.1|	-	0.16	12.4	1.8	0.2	12.1	1.2	1.2	1	0	0	1	1	1	0	N-terminal	domain	of	unknown	function	(DUF4140)
Med9	PF07544.8	gi|479326498|ref|YP_007866553.1|	-	0.27	11.0	3.6	0.28	10.9	1.9	1.5	1	1	0	1	1	1	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
FlxA	PF14282.1	gi|479326498|ref|YP_007866553.1|	-	0.44	10.5	6.3	0.57	10.1	3.8	1.4	1	1	0	1	1	1	0	FlxA-like	protein
Ribosomal_L29	PF00831.18	gi|479326498|ref|YP_007866553.1|	-	0.48	10.1	7.5	0.18	11.5	3.1	1.7	2	0	0	2	2	2	0	Ribosomal	L29	protein
Synaptobrevin	PF00957.16	gi|479326498|ref|YP_007866553.1|	-	0.71	9.5	9.7	0.17	11.4	2.2	2.1	2	0	0	2	2	2	0	Synaptobrevin
DUF724	PF05266.9	gi|479326498|ref|YP_007866553.1|	-	0.91	9.1	7.3	1.1	8.8	5.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF724)
bZIP_2	PF07716.10	gi|479326498|ref|YP_007866553.1|	-	2	8.2	9.1	0.24	11.2	2.0	2.0	2	0	0	2	2	2	0	Basic	region	leucine	zipper
ILVD_EDD	PF00920.16	gi|479326499|ref|YP_007866554.1|	-	1.8e-212	706.4	1.2	2e-212	706.2	0.8	1.0	1	0	0	1	1	1	1	Dehydratase	family
Peptidase_M32	PF02074.10	gi|479326500|ref|YP_007866555.1|	-	1.2e-133	446.3	5.1	1.3e-133	446.2	3.6	1.0	1	0	0	1	1	1	1	Carboxypeptidase	Taq	(M32)	metallopeptidase
Big_3_4	PF13754.1	gi|479326501|ref|YP_007866556.1|	-	0.4	11.0	6.0	2.7	8.4	0.2	3.2	3	0	0	3	3	3	0	Bacterial	Ig-like	domain	(group	3)
PKD	PF00801.15	gi|479326501|ref|YP_007866556.1|	-	0.94	9.2	4.2	3.2	7.5	0.2	2.5	2	1	0	2	2	2	0	PKD	domain
HTH_IclR	PF09339.5	gi|479326502|ref|YP_007866557.1|	-	9.9e-10	37.8	0.0	1.7e-09	37.1	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
MarR_2	PF12802.2	gi|479326502|ref|YP_007866557.1|	-	1.7e-07	30.8	0.0	3.4e-07	29.8	0.0	1.4	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|479326502|ref|YP_007866557.1|	-	1.7e-06	27.6	0.3	4.7e-06	26.2	0.2	1.7	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_27	PF13463.1	gi|479326502|ref|YP_007866557.1|	-	5.3e-06	26.6	0.1	1.2e-05	25.5	0.1	1.6	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_24	PF13412.1	gi|479326502|ref|YP_007866557.1|	-	2e-05	23.9	0.1	4.9e-05	22.6	0.0	1.8	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_20	PF12840.2	gi|479326502|ref|YP_007866557.1|	-	0.0005	19.8	0.0	0.00082	19.1	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_36	PF13730.1	gi|479326502|ref|YP_007866557.1|	-	0.017	15.2	0.0	0.04	14.0	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|479326502|ref|YP_007866557.1|	-	0.024	14.3	0.0	0.07	12.7	0.0	1.8	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
Na_H_antiport_2	PF13726.1	gi|479326502|ref|YP_007866557.1|	-	0.026	14.4	0.1	0.3	11.0	0.0	2.4	2	1	1	3	3	3	0	Na+-H+	antiporter	family
MarR	PF01047.17	gi|479326502|ref|YP_007866557.1|	-	0.063	12.9	0.4	0.16	11.7	0.0	1.8	2	0	0	2	2	2	0	MarR	family
HTH_28	PF13518.1	gi|479326502|ref|YP_007866557.1|	-	0.077	13.0	0.0	0.15	12.1	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_AsnC-type	PF13404.1	gi|479326502|ref|YP_007866557.1|	-	0.13	11.8	0.0	0.25	10.8	0.0	1.5	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
PA14	PF07691.7	gi|479326503|ref|YP_007866558.1|	-	0.099	12.2	1.0	0.16	11.6	0.7	1.3	1	0	0	1	1	1	0	PA14	domain
SSP160	PF06933.6	gi|479326503|ref|YP_007866558.1|	-	3	5.7	14.0	4.9	4.9	9.7	1.3	1	0	0	1	1	1	0	Special	lobe-specific	silk	protein	SSP160
Mucin	PF01456.12	gi|479326503|ref|YP_007866558.1|	-	5.2	6.8	18.2	7.6	6.2	12.6	1.2	1	0	0	1	1	1	0	Mucin-like	glycoprotein
Rifin_STEVOR	PF02009.11	gi|479326504|ref|YP_007866559.1|	-	0.0023	17.6	6.1	0.0023	17.6	4.2	1.7	2	0	0	2	2	2	1	Rifin/stevor	family
TMEM154	PF15102.1	gi|479326504|ref|YP_007866559.1|	-	0.0031	17.2	12.8	0.0094	15.6	8.9	1.8	1	0	0	1	1	1	1	TMEM154	protein	family
Orthoreo_P10	PF07204.6	gi|479326504|ref|YP_007866559.1|	-	0.082	12.6	1.5	0.49	10.1	1.2	2.2	2	0	0	2	2	2	0	Orthoreovirus	membrane	fusion	protein	p10
Herpes_UL45	PF05473.7	gi|479326504|ref|YP_007866559.1|	-	0.24	10.8	4.7	0.51	9.7	3.2	1.5	1	0	0	1	1	1	0	UL45	protein
LysE	PF01810.13	gi|479326505|ref|YP_007866560.1|	-	0.0012	18.1	4.1	0.0012	18.1	2.9	3.4	2	2	1	3	3	3	1	LysE	type	translocator
DUF1469	PF07332.6	gi|479326505|ref|YP_007866560.1|	-	0.0033	17.1	0.0	0.0033	17.1	0.0	3.3	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF1469)
DUF1761	PF08570.5	gi|479326505|ref|YP_007866560.1|	-	9.4	6.2	24.2	6	6.9	1.0	3.3	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1761)
HTH_10	PF04967.7	gi|479326506|ref|YP_007866561.1|	-	2.1e-21	75.2	0.0	3.5e-21	74.5	0.0	1.4	1	0	0	1	1	1	1	HTH	DNA	binding	domain
Sigma70_r4	PF04545.11	gi|479326506|ref|YP_007866561.1|	-	4.3e-06	25.9	0.0	1.7e-05	24.0	0.0	2.0	1	1	0	1	1	1	1	Sigma-70,	region	4
HTH_23	PF13384.1	gi|479326506|ref|YP_007866561.1|	-	0.00015	21.2	0.0	0.031	13.9	0.0	2.6	2	0	0	2	2	2	1	Homeodomain-like	domain
MarR_2	PF12802.2	gi|479326506|ref|YP_007866561.1|	-	0.0061	16.2	0.0	0.014	15.0	0.0	1.6	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.1	gi|479326506|ref|YP_007866561.1|	-	0.019	15.3	0.0	0.58	10.5	0.0	2.3	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
DUF4449	PF14613.1	gi|479326506|ref|YP_007866561.1|	-	0.022	14.7	0.1	0.034	14.0	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4449)
HTH_28	PF13518.1	gi|479326506|ref|YP_007866561.1|	-	0.022	14.7	0.1	5	7.2	0.1	2.6	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|479326506|ref|YP_007866561.1|	-	0.034	13.8	0.0	1.5	8.5	0.0	2.6	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
HTH_22	PF13309.1	gi|479326506|ref|YP_007866561.1|	-	0.067	12.9	0.1	0.26	11.0	0.0	2.1	2	0	0	2	2	2	0	HTH	domain
HTH_24	PF13412.1	gi|479326506|ref|YP_007866561.1|	-	0.076	12.4	2.7	0.5	9.7	0.0	3.2	3	1	1	4	4	4	0	Winged	helix-turn-helix	DNA-binding
GntR	PF00392.16	gi|479326506|ref|YP_007866561.1|	-	0.087	12.2	0.0	0.48	9.8	0.0	2.2	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
DUF2376	PF09550.5	gi|479326506|ref|YP_007866561.1|	-	0.087	12.9	0.0	0.16	12.1	0.0	1.4	1	0	0	1	1	1	0	Conserved	hypothetical	phage	protein	(DUF2376)
AAA_21	PF13304.1	gi|479326506|ref|YP_007866561.1|	-	0.54	10.1	7.0	0.7	9.8	4.8	1.2	1	0	0	1	1	1	0	AAA	domain
ABC_tran	PF00005.22	gi|479326509|ref|YP_007866564.1|	-	5.9e-14	52.5	0.0	1.2e-13	51.5	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
MMR_HSR1	PF01926.18	gi|479326509|ref|YP_007866564.1|	-	0.0022	17.9	0.0	0.0032	17.3	0.0	1.4	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
AAA_14	PF13173.1	gi|479326509|ref|YP_007866564.1|	-	0.0031	17.4	0.1	0.021	14.7	0.1	2.2	1	1	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|479326509|ref|YP_007866564.1|	-	0.0047	16.6	0.2	0.011	15.4	0.2	1.7	1	1	0	1	1	1	1	Archaeal	ATPase
Miro	PF08477.8	gi|479326509|ref|YP_007866564.1|	-	0.0058	17.1	0.1	0.023	15.2	0.1	1.9	2	0	0	2	2	2	1	Miro-like	protein
MobB	PF03205.9	gi|479326509|ref|YP_007866564.1|	-	0.073	12.7	0.5	0.24	11.0	0.3	2.0	1	1	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
DoxD	PF04173.8	gi|479326511|ref|YP_007866566.1|	-	5.2e-61	205.1	14.2	6.1e-61	204.9	9.8	1.0	1	0	0	1	1	1	1	TQO	small	subunit	DoxD
DoxX	PF07681.7	gi|479326511|ref|YP_007866566.1|	-	1.9e-09	37.7	5.2	3.9e-09	36.7	3.6	1.5	1	0	0	1	1	1	1	DoxX
DoxX_3	PF13781.1	gi|479326511|ref|YP_007866566.1|	-	9.1	6.7	13.9	4.2	7.7	4.4	2.8	1	1	1	3	3	3	0	DoxX-like	family
Lactonase	PF10282.4	gi|479326513|ref|YP_007866568.1|	-	0.00026	20.1	0.0	0.18	10.8	0.0	2.4	1	1	1	2	2	2	2	Lactonase,	7-bladed	beta-propeller
PQQ_2	PF13360.1	gi|479326513|ref|YP_007866568.1|	-	0.011	15.2	0.0	0.023	14.1	0.0	1.6	1	0	0	1	1	1	0	PQQ-like	domain
Peptidase_M56	PF05569.6	gi|479326513|ref|YP_007866568.1|	-	0.13	11.2	0.2	0.19	10.6	0.1	1.2	1	0	0	1	1	1	0	BlaR1	peptidase	M56
Shisa	PF13908.1	gi|479326513|ref|YP_007866568.1|	-	0.13	12.3	0.2	0.21	11.7	0.1	1.3	1	0	0	1	1	1	0	Wnt	and	FGF	inhibitory	regulator
TusA	PF01206.12	gi|479326514|ref|YP_007866569.1|	-	6e-14	51.4	0.1	2e-13	49.7	0.0	1.9	1	0	0	1	1	1	1	Sulfurtransferase	TusA
LA-virus_coat	PF09220.5	gi|479326515|ref|YP_007866570.1|	-	0.12	10.7	0.0	0.14	10.5	0.0	1.1	1	0	0	1	1	1	0	L-A	virus,	major	coat	protein
DrsE	PF02635.10	gi|479326516|ref|YP_007866571.1|	-	5.9e-06	26.3	0.0	6.3e-06	26.2	0.0	1.1	1	0	0	1	1	1	1	DsrE/DsrF-like	family
TusA	PF01206.12	gi|479326517|ref|YP_007866572.1|	-	7.5e-19	67.1	0.1	8.6e-19	66.9	0.0	1.0	1	0	0	1	1	1	1	Sulfurtransferase	TusA
DUF2249	PF10006.4	gi|479326517|ref|YP_007866572.1|	-	0.00017	21.0	0.0	0.00027	20.4	0.0	1.3	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2249)
Sulf_transp	PF04143.9	gi|479326518|ref|YP_007866573.1|	-	1e-15	57.4	43.8	2.1e-11	43.6	4.6	4.2	4	0	0	4	4	4	3	Sulphur	transport
VIT1	PF01988.14	gi|479326518|ref|YP_007866573.1|	-	0.005	16.3	0.8	0.005	16.3	0.6	3.9	3	1	1	4	4	4	1	VIT	family
DrsE_2	PF13686.1	gi|479326520|ref|YP_007866575.1|	-	3.2e-12	46.4	0.4	2.2e-05	24.3	0.0	2.0	1	1	1	2	2	2	2	DsrE/DsrF/DrsH-like	family
DrsE	PF02635.10	gi|479326520|ref|YP_007866575.1|	-	6.4e-07	29.4	0.0	7.3e-07	29.2	0.0	1.0	1	0	0	1	1	1	1	DsrE/DsrF-like	family
NCD1	PF04904.8	gi|479326520|ref|YP_007866575.1|	-	0.038	13.7	0.0	0.072	12.8	0.0	1.6	1	0	0	1	1	1	0	NAB	conserved	region	1	(NCD1)
ABC_tran	PF00005.22	gi|479326521|ref|YP_007866576.1|	-	1e-25	90.6	0.0	1.6e-25	89.9	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|479326521|ref|YP_007866576.1|	-	9.1e-12	45.5	6.1	1.2e-06	28.6	0.2	2.7	2	1	1	3	3	3	2	AAA	domain
AAA_15	PF13175.1	gi|479326521|ref|YP_007866576.1|	-	9.3e-08	31.5	2.2	0.0035	16.4	0.1	2.4	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_29	PF13555.1	gi|479326521|ref|YP_007866576.1|	-	1.3e-05	24.6	0.1	2.6e-05	23.6	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|479326521|ref|YP_007866576.1|	-	4e-05	24.0	1.3	5.3e-05	23.6	0.8	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|479326521|ref|YP_007866576.1|	-	0.0019	18.3	0.3	0.011	15.9	0.1	2.2	2	1	0	2	2	2	1	AAA	domain
T2SE	PF00437.15	gi|479326521|ref|YP_007866576.1|	-	0.0029	16.5	0.0	0.0048	15.8	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
DUF258	PF03193.11	gi|479326521|ref|YP_007866576.1|	-	0.003	16.7	0.1	0.0065	15.6	0.1	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
ACT_7	PF13840.1	gi|479326521|ref|YP_007866576.1|	-	0.0048	16.3	0.2	0.016	14.7	0.0	2.0	2	0	0	2	2	1	1	ACT	domain
AAA_16	PF13191.1	gi|479326521|ref|YP_007866576.1|	-	0.005	16.8	0.0	0.0069	16.3	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
SMC_N	PF02463.14	gi|479326521|ref|YP_007866576.1|	-	0.0079	15.4	1.1	0.046	12.9	0.2	2.1	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
MutS_V	PF00488.16	gi|479326521|ref|YP_007866576.1|	-	0.011	15.2	0.2	0.066	12.6	0.0	2.0	2	0	0	2	2	2	0	MutS	domain	V
Arch_ATPase	PF01637.13	gi|479326521|ref|YP_007866576.1|	-	0.012	15.3	0.5	0.04	13.6	0.3	1.9	1	1	0	1	1	1	0	Archaeal	ATPase
AAA_10	PF12846.2	gi|479326521|ref|YP_007866576.1|	-	0.018	14.5	0.2	0.041	13.3	0.1	1.7	1	1	1	2	2	2	0	AAA-like	domain
AAA_14	PF13173.1	gi|479326521|ref|YP_007866576.1|	-	0.026	14.4	0.0	0.25	11.2	0.0	2.2	2	1	0	2	2	2	0	AAA	domain
AAA_19	PF13245.1	gi|479326521|ref|YP_007866576.1|	-	0.039	13.6	0.0	0.082	12.6	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_13	PF13166.1	gi|479326521|ref|YP_007866576.1|	-	0.044	12.2	0.7	0.074	11.5	0.1	1.6	2	0	0	2	2	2	0	AAA	domain
AAA_PrkA	PF08298.6	gi|479326521|ref|YP_007866576.1|	-	0.057	12.0	0.4	0.12	11.0	0.0	1.8	2	1	0	2	2	2	0	PrkA	AAA	domain
AAA_25	PF13481.1	gi|479326521|ref|YP_007866576.1|	-	0.068	12.5	0.0	0.21	10.9	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
AAA_17	PF13207.1	gi|479326521|ref|YP_007866576.1|	-	0.13	13.0	0.5	0.39	11.5	0.3	2.2	1	1	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|479326521|ref|YP_007866576.1|	-	0.16	12.2	0.5	0.83	9.8	0.3	2.2	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ABC_ATPase	PF09818.4	gi|479326521|ref|YP_007866576.1|	-	0.16	10.5	0.3	0.29	9.6	0.2	1.4	1	0	0	1	1	1	0	Predicted	ATPase	of	the	ABC	class
AAA_30	PF13604.1	gi|479326521|ref|YP_007866576.1|	-	0.19	11.2	0.0	0.34	10.4	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
LMF1	PF06762.9	gi|479326522|ref|YP_007866577.1|	-	1.5	7.5	6.3	1	8.1	3.5	1.3	1	1	0	1	1	1	0	Lipase	maturation	factor
CRPA	PF05745.6	gi|479326523|ref|YP_007866578.1|	-	0.39	10.4	3.0	2.4	7.9	0.4	2.1	2	0	0	2	2	2	0	Chlamydia	15	kDa	cysteine-rich	outer	membrane	protein	(CRPA)
CD20	PF04103.10	gi|479326523|ref|YP_007866578.1|	-	0.67	9.8	8.3	0.35	10.7	3.4	2.1	1	1	1	2	2	2	0	CD20-like	family
DUF1056	PF06341.6	gi|479326523|ref|YP_007866578.1|	-	1.5	8.9	8.5	0.15	12.1	0.7	2.7	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1056)
DUF3096	PF11295.3	gi|479326523|ref|YP_007866578.1|	-	3	7.4	12.1	4.8	6.7	2.1	2.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3096)
YtpI	PF14007.1	gi|479326523|ref|YP_007866578.1|	-	3.5	7.5	9.2	15	5.6	0.2	3.1	2	1	1	3	3	3	0	YtpI-like	protein
DUF3188	PF11384.3	gi|479326523|ref|YP_007866578.1|	-	8.2	6.0	7.8	9.3	5.9	0.3	2.7	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3188)
DUF4064	PF13273.1	gi|479326523|ref|YP_007866578.1|	-	8.9	6.4	9.1	2.6	8.1	1.5	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4064)
HTH_10	PF04967.7	gi|479326524|ref|YP_007866579.1|	-	1.4e-22	79.0	0.1	2.3e-22	78.3	0.1	1.4	1	0	0	1	1	1	1	HTH	DNA	binding	domain
Sigma70_r4	PF04545.11	gi|479326524|ref|YP_007866579.1|	-	0.004	16.4	0.0	0.011	15.0	0.0	1.7	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_24	PF13412.1	gi|479326524|ref|YP_007866579.1|	-	0.0051	16.1	1.6	0.081	12.3	0.0	2.6	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
Fe-S_biosyn	PF01521.15	gi|479326524|ref|YP_007866579.1|	-	0.079	12.9	0.1	0.11	12.4	0.0	1.3	1	0	0	1	1	1	0	Iron-sulphur	cluster	biosynthesis
Vezatin	PF12632.2	gi|479326524|ref|YP_007866579.1|	-	0.096	11.7	0.0	0.28	10.2	0.0	1.6	1	1	1	2	2	2	0	Mysoin-binding	motif	of	peroxisomes
MFS_1	PF07690.11	gi|479326525|ref|YP_007866580.1|	-	6.4e-44	150.0	50.1	6.4e-44	150.0	34.7	1.8	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|479326525|ref|YP_007866580.1|	-	1.2e-09	37.3	38.5	3.1e-09	35.9	26.6	1.7	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
EamA	PF00892.15	gi|479326526|ref|YP_007866581.1|	-	1e-08	35.2	9.6	1.1e-08	35.1	6.7	1.0	1	0	0	1	1	1	1	EamA-like	transporter	family
TPT	PF03151.11	gi|479326526|ref|YP_007866581.1|	-	0.5	10.0	4.4	0.64	9.6	3.1	1.1	1	0	0	1	1	1	0	Triose-phosphate	Transporter	family
DUF3021	PF11457.3	gi|479326526|ref|YP_007866581.1|	-	1.8	8.4	8.6	2.3	8.1	6.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3021)
Antitoxin-MazE	PF04014.13	gi|479326527|ref|YP_007866582.1|	-	7.1e-14	51.1	0.2	1e-13	50.6	0.1	1.3	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
DUF3006	PF11213.3	gi|479326527|ref|YP_007866582.1|	-	0.012	15.3	0.1	0.015	15.0	0.0	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3006)
SH3_2	PF07653.12	gi|479326527|ref|YP_007866582.1|	-	0.035	13.6	0.0	0.039	13.4	0.0	1.3	1	0	0	1	1	1	0	Variant	SH3	domain
PIN	PF01850.16	gi|479326528|ref|YP_007866583.1|	-	6.1e-18	65.3	1.7	6.8e-18	65.1	1.2	1.0	1	0	0	1	1	1	1	PIN	domain
PIN_4	PF13638.1	gi|479326528|ref|YP_007866583.1|	-	0.017	15.2	0.3	0.021	14.8	0.2	1.3	1	0	0	1	1	1	0	PIN	domain
EamA	PF00892.15	gi|479326529|ref|YP_007866584.1|	-	4e-11	43.0	12.3	4e-11	43.0	8.5	3.0	1	1	2	3	3	3	2	EamA-like	transporter	family
RELT	PF12606.3	gi|479326529|ref|YP_007866584.1|	-	0.43	9.7	0.1	0.43	9.7	0.1	3.3	4	0	0	4	4	4	0	Tumour	necrosis	factor	receptor	superfamily	member	19
OrfB_Zn_ribbon	PF07282.6	gi|479327031|ref|YP_007866585.1|	-	8.7e-21	73.3	3.1	1e-20	73.1	0.2	2.5	3	0	0	3	3	3	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|479327031|ref|YP_007866585.1|	-	3.1e-08	33.3	0.3	5.2e-08	32.5	0.2	1.3	1	0	0	1	1	1	1	Probable	transposase
zf-RING_4	PF14570.1	gi|479327031|ref|YP_007866585.1|	-	0.1	12.2	3.3	0.075	12.6	1.1	1.6	2	0	0	2	2	2	0	RING/Ubox	like	zinc-binding	domain
Zip	PF02535.17	gi|479326530|ref|YP_007866586.1|	-	0.00019	20.5	17.3	0.00057	18.9	4.2	2.6	2	1	0	2	2	2	2	ZIP	Zinc	transporter
DUF3917	PF13055.1	gi|479326530|ref|YP_007866586.1|	-	0.016	15.4	1.6	0.071	13.3	1.1	2.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3917)
DHDPS	PF00701.17	gi|479326531|ref|YP_007866587.1|	-	6.6e-59	198.8	0.0	7.7e-59	198.6	0.0	1.0	1	0	0	1	1	1	1	Dihydrodipicolinate	synthetase	family
Cyclase	PF04199.8	gi|479326532|ref|YP_007866588.1|	-	2.2e-26	92.5	0.0	2.9e-26	92.1	0.0	1.1	1	0	0	1	1	1	1	Putative	cyclase
ABC_tran	PF00005.22	gi|479326533|ref|YP_007866589.1|	-	2.4e-32	112.1	0.0	3.9e-32	111.4	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|479326533|ref|YP_007866589.1|	-	7.5e-07	29.3	0.0	0.00032	20.7	0.0	2.5	1	1	0	2	2	2	2	AAA	domain
AAA_10	PF12846.2	gi|479326533|ref|YP_007866589.1|	-	0.0053	16.2	0.1	1.5	8.1	0.0	2.2	2	0	0	2	2	2	2	AAA-like	domain
SbcCD_C	PF13558.1	gi|479326533|ref|YP_007866589.1|	-	0.0061	16.4	0.1	0.025	14.4	0.1	1.9	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_15	PF13175.1	gi|479326533|ref|YP_007866589.1|	-	0.012	14.6	0.0	0.12	11.3	0.0	2.1	1	1	0	2	2	2	0	AAA	ATPase	domain
AAA	PF00004.24	gi|479326533|ref|YP_007866589.1|	-	0.058	13.6	0.0	2.1	8.5	0.0	2.6	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.1	gi|479326533|ref|YP_007866589.1|	-	0.07	13.1	0.3	0.41	10.5	0.2	2.0	1	1	1	2	2	2	0	AAA	ATPase	domain
AAA_22	PF13401.1	gi|479326533|ref|YP_007866589.1|	-	0.078	13.1	0.0	1.1	9.4	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
BPD_transp_1	PF00528.17	gi|479326534|ref|YP_007866590.1|	-	3.6e-15	55.9	29.7	3.6e-15	55.9	20.6	2.6	2	1	1	3	3	3	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.17	gi|479326535|ref|YP_007866591.1|	-	2.9e-11	43.2	25.7	2.9e-11	43.2	17.8	2.1	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
UPF0697	PF15117.1	gi|479326535|ref|YP_007866591.1|	-	0.2	11.4	4.4	0.29	10.9	0.0	3.0	3	1	1	4	4	4	0	Uncharacterised	protein	family	UPF0697
SBP_bac_8	PF13416.1	gi|479326536|ref|YP_007866592.1|	-	7.5e-10	38.9	8.4	1.4e-09	38.1	5.8	1.5	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_1	PF01547.20	gi|479326536|ref|YP_007866592.1|	-	0.00012	21.8	6.0	0.00012	21.8	4.1	2.4	1	1	2	3	3	3	1	Bacterial	extracellular	solute-binding	protein
DUF1628	PF07790.6	gi|479326536|ref|YP_007866592.1|	-	0.2	12.4	2.6	0.5	11.1	1.8	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1628)
SSP160	PF06933.6	gi|479326536|ref|YP_007866592.1|	-	2.3	6.0	15.7	3.3	5.5	10.9	1.1	1	0	0	1	1	1	0	Special	lobe-specific	silk	protein	SSP160
AMP-binding	PF00501.23	gi|479326537|ref|YP_007866593.1|	-	3.4e-79	266.1	0.0	4e-79	265.9	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|479326537|ref|YP_007866593.1|	-	4e-21	75.7	0.2	8.2e-21	74.7	0.1	1.6	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
Baculo_PEP_N	PF04512.7	gi|479326537|ref|YP_007866593.1|	-	0.09	12.7	0.1	0.42	10.6	0.0	2.0	2	0	0	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	N	terminus
IU_nuc_hydro	PF01156.14	gi|479326538|ref|YP_007866594.1|	-	1.3e-06	27.8	0.1	1.4e-06	27.7	0.0	1.0	1	0	0	1	1	1	1	Inosine-uridine	preferring	nucleoside	hydrolase
IU_nuc_hydro	PF01156.14	gi|479326539|ref|YP_007866595.1|	-	1.4e-06	27.7	0.0	1.4e-06	27.7	0.0	1.0	1	0	0	1	1	1	1	Inosine-uridine	preferring	nucleoside	hydrolase
HTH_10	PF04967.7	gi|479326540|ref|YP_007866596.1|	-	3.8e-19	67.9	0.0	7.7e-19	67.0	0.0	1.5	1	0	0	1	1	1	1	HTH	DNA	binding	domain
Sigma70_r4	PF04545.11	gi|479326540|ref|YP_007866596.1|	-	0.00069	18.8	0.1	0.0013	18.0	0.1	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
GED	PF02212.13	gi|479326540|ref|YP_007866596.1|	-	0.036	13.9	3.1	0.12	12.2	1.8	2.2	1	1	0	1	1	1	0	Dynamin	GTPase	effector	domain
GerE	PF00196.14	gi|479326540|ref|YP_007866596.1|	-	0.048	12.9	0.2	0.048	12.9	0.1	2.9	3	0	0	3	3	3	0	Bacterial	regulatory	proteins,	luxR	family
HTH_5	PF01022.15	gi|479326540|ref|YP_007866596.1|	-	0.053	13.1	0.0	0.54	9.9	0.0	2.4	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
Alpha_L_fucos	PF01120.12	gi|479326541|ref|YP_007866597.1|	-	1.4e-91	307.0	1.7	1.7e-91	306.6	1.2	1.1	1	0	0	1	1	1	1	Alpha-L-fucosidase
BPD_transp_1	PF00528.17	gi|479326542|ref|YP_007866598.1|	-	4.3e-13	49.1	22.2	4.3e-13	49.1	15.4	2.1	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.2	gi|479326542|ref|YP_007866598.1|	-	6.5e-05	22.2	0.3	6.5e-05	22.2	0.2	2.7	3	1	0	3	3	3	1	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
BNIP3	PF06553.7	gi|479326542|ref|YP_007866598.1|	-	2.5	7.4	3.7	1.2	8.4	0.4	2.0	2	0	0	2	2	2	0	BNIP3
BPD_transp_1	PF00528.17	gi|479326543|ref|YP_007866599.1|	-	1.1e-34	119.5	18.1	1.1e-34	119.5	12.6	2.1	1	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
DUF1275	PF06912.6	gi|479326543|ref|YP_007866599.1|	-	0.0028	16.8	5.3	0.0028	16.8	3.7	2.6	2	2	0	2	2	2	1	Protein	of	unknown	function	(DUF1275)
ABC_tran	PF00005.22	gi|479326544|ref|YP_007866600.1|	-	4.1e-64	214.9	0.0	2.9e-33	115.0	0.0	2.2	2	0	0	2	2	2	2	ABC	transporter
oligo_HPY	PF08352.7	gi|479326544|ref|YP_007866600.1|	-	6e-27	93.7	0.8	1.2e-18	67.2	0.1	2.4	2	0	0	2	2	2	2	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|479326544|ref|YP_007866600.1|	-	1.1e-19	71.4	5.2	1.5e-07	31.6	0.2	4.2	2	2	1	4	4	4	3	AAA	domain
AAA_10	PF12846.2	gi|479326544|ref|YP_007866600.1|	-	1.8e-08	34.1	1.6	0.58	9.5	0.0	4.2	3	1	0	4	4	4	3	AAA-like	domain
SMC_N	PF02463.14	gi|479326544|ref|YP_007866600.1|	-	2.6e-08	33.3	0.3	0.0007	18.8	0.0	3.2	2	2	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|479326544|ref|YP_007866600.1|	-	3e-08	33.0	0.3	0.0065	15.9	0.0	2.4	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.1	gi|479326544|ref|YP_007866600.1|	-	3.5e-08	32.9	2.5	0.13	11.3	0.0	4.2	4	0	0	4	4	4	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|479326544|ref|YP_007866600.1|	-	5.9e-08	33.2	0.7	0.00055	20.3	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
DUF258	PF03193.11	gi|479326544|ref|YP_007866600.1|	-	7.4e-08	31.7	0.6	0.00099	18.3	0.2	2.5	2	0	0	2	2	2	2	Protein	of	unknown	function,	DUF258
AAA_25	PF13481.1	gi|479326544|ref|YP_007866600.1|	-	1.9e-07	30.6	0.0	0.061	12.7	0.0	3.3	3	0	0	3	3	3	2	AAA	domain
AAA_5	PF07728.9	gi|479326544|ref|YP_007866600.1|	-	2.8e-07	30.3	0.1	0.025	14.3	0.0	2.5	2	0	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
AAA_18	PF13238.1	gi|479326544|ref|YP_007866600.1|	-	2.3e-06	27.9	0.0	0.025	14.8	0.0	3.0	2	0	0	2	2	2	2	AAA	domain
AAA_17	PF13207.1	gi|479326544|ref|YP_007866600.1|	-	4.7e-06	27.4	0.0	0.12	13.2	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
AAA_22	PF13401.1	gi|479326544|ref|YP_007866600.1|	-	3.6e-05	23.9	8.0	0.2	11.7	1.2	3.9	2	2	0	2	2	2	2	AAA	domain
AAA	PF00004.24	gi|479326544|ref|YP_007866600.1|	-	5.3e-05	23.4	0.5	0.51	10.5	0.0	3.5	3	1	0	3	3	3	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
RNA_helicase	PF00910.17	gi|479326544|ref|YP_007866600.1|	-	5.5e-05	23.2	0.1	0.35	11.0	0.0	2.7	2	0	0	2	2	2	2	RNA	helicase
DUF87	PF01935.12	gi|479326544|ref|YP_007866600.1|	-	0.00012	22.0	0.4	0.058	13.2	0.0	2.6	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF87
AAA_16	PF13191.1	gi|479326544|ref|YP_007866600.1|	-	0.00013	22.0	0.0	0.069	13.1	0.0	2.3	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_13	PF13166.1	gi|479326544|ref|YP_007866600.1|	-	0.00055	18.5	1.1	0.033	12.6	0.0	3.3	4	0	0	4	4	3	1	AAA	domain
PRK	PF00485.13	gi|479326544|ref|YP_007866600.1|	-	0.00056	19.5	0.0	0.058	12.9	0.0	2.3	2	0	0	2	2	2	1	Phosphoribulokinase	/	Uridine	kinase	family
APS_kinase	PF01583.15	gi|479326544|ref|YP_007866600.1|	-	0.0011	18.6	0.3	0.78	9.3	0.1	2.3	2	0	0	2	2	2	1	Adenylylsulphate	kinase
AAA_19	PF13245.1	gi|479326544|ref|YP_007866600.1|	-	0.0019	17.9	0.3	1.8	8.3	0.2	2.7	2	0	0	2	2	2	1	Part	of	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|479326544|ref|YP_007866600.1|	-	0.0035	16.8	0.0	2.2	7.7	0.0	2.5	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
AAA_33	PF13671.1	gi|479326544|ref|YP_007866600.1|	-	0.0037	17.1	0.0	2.1	8.2	0.0	2.6	2	1	0	2	2	2	1	AAA	domain
NB-ARC	PF00931.17	gi|479326544|ref|YP_007866600.1|	-	0.0046	15.8	0.4	0.71	8.6	0.0	2.3	2	0	0	2	2	2	1	NB-ARC	domain
ATP-synt_ab	PF00006.20	gi|479326544|ref|YP_007866600.1|	-	0.0068	15.9	0.0	0.78	9.1	0.0	2.3	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
NTPase_1	PF03266.10	gi|479326544|ref|YP_007866600.1|	-	0.0075	15.9	0.4	0.31	10.7	0.0	2.6	2	0	0	2	2	2	1	NTPase
IstB_IS21	PF01695.12	gi|479326544|ref|YP_007866600.1|	-	0.0077	15.6	0.1	2.5	7.4	0.0	2.5	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
AAA_14	PF13173.1	gi|479326544|ref|YP_007866600.1|	-	0.0085	15.9	0.3	0.35	10.7	0.0	2.8	3	0	0	3	3	2	1	AAA	domain
CbiA	PF01656.18	gi|479326544|ref|YP_007866600.1|	-	0.011	15.1	1.0	2.9	7.2	0.1	2.7	3	0	0	3	3	2	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
NACHT	PF05729.7	gi|479326544|ref|YP_007866600.1|	-	0.011	15.4	3.1	0.3	10.7	0.0	2.7	2	0	0	2	2	2	0	NACHT	domain
Mg_chelatase	PF01078.16	gi|479326544|ref|YP_007866600.1|	-	0.011	14.8	0.0	5.5	6.0	0.0	2.6	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
Sigma54_activat	PF00158.21	gi|479326544|ref|YP_007866600.1|	-	0.012	15.0	0.1	1.7	8.1	0.0	2.4	2	0	0	2	2	2	0	Sigma-54	interaction	domain
KaiC	PF06745.8	gi|479326544|ref|YP_007866600.1|	-	0.018	14.1	1.1	1.8	7.6	0.0	3.0	3	0	0	3	3	3	0	KaiC
T2SE	PF00437.15	gi|479326544|ref|YP_007866600.1|	-	0.019	13.8	0.0	1.4	7.7	0.0	2.4	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
MobB	PF03205.9	gi|479326544|ref|YP_007866600.1|	-	0.021	14.5	0.7	7.2	6.3	0.0	2.7	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_28	PF13521.1	gi|479326544|ref|YP_007866600.1|	-	0.024	14.5	0.0	3.1	7.7	0.0	2.4	2	0	0	2	2	2	0	AAA	domain
ABC_ATPase	PF09818.4	gi|479326544|ref|YP_007866600.1|	-	0.032	12.8	8.0	0.47	8.9	0.3	3.9	4	1	0	4	4	4	0	Predicted	ATPase	of	the	ABC	class
Zeta_toxin	PF06414.7	gi|479326544|ref|YP_007866600.1|	-	0.038	13.0	0.4	5.5	6.0	0.0	2.6	2	0	0	2	2	2	0	Zeta	toxin
PhoH	PF02562.11	gi|479326544|ref|YP_007866600.1|	-	0.038	13.2	0.6	5.2	6.2	0.0	2.5	2	0	0	2	2	2	0	PhoH-like	protein
SRP54	PF00448.17	gi|479326544|ref|YP_007866600.1|	-	0.039	13.3	0.1	0.26	10.6	0.0	2.5	4	0	0	4	4	1	0	SRP54-type	protein,	GTPase	domain
SbcCD_C	PF13558.1	gi|479326544|ref|YP_007866600.1|	-	0.044	13.6	0.0	14	5.6	0.0	3.2	2	1	0	2	2	2	0	Putative	exonuclease	SbcCD,	C	subunit
MMR_HSR1	PF01926.18	gi|479326544|ref|YP_007866600.1|	-	0.052	13.5	0.0	4	7.4	0.0	2.6	2	0	0	2	2	2	0	50S	ribosome-binding	GTPase
AAA_30	PF13604.1	gi|479326544|ref|YP_007866600.1|	-	0.077	12.5	0.9	2.4	7.7	0.1	2.8	3	0	0	3	3	3	0	AAA	domain
zf-CCCH_2	PF14608.1	gi|479326544|ref|YP_007866600.1|	-	0.13	12.2	1.1	0.24	11.4	0.8	1.4	1	0	0	1	1	1	0	Zinc	finger	C-x8-C-x5-C-x3-H	type
Aldo_ket_red	PF00248.16	gi|479326545|ref|YP_007866601.1|	-	6e-71	238.5	0.0	6.9e-71	238.3	0.0	1.0	1	0	0	1	1	1	1	Aldo/keto	reductase	family
SBP_bac_5	PF00496.17	gi|479326546|ref|YP_007866602.1|	-	2.2e-42	145.2	8.8	3.5e-42	144.5	6.1	1.3	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
DUF4064	PF13273.1	gi|479326546|ref|YP_007866602.1|	-	0.0096	16.0	3.9	0.45	10.6	2.2	2.4	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF4064)
Rifin_STEVOR	PF02009.11	gi|479326546|ref|YP_007866602.1|	-	0.016	14.8	4.9	0.022	14.3	3.4	1.2	1	0	0	1	1	1	0	Rifin/stevor	family
Podoplanin	PF05808.6	gi|479326546|ref|YP_007866602.1|	-	0.022	14.3	10.4	0.034	13.7	7.2	1.2	1	0	0	1	1	1	0	Podoplanin
SSP160	PF06933.6	gi|479326546|ref|YP_007866602.1|	-	0.035	12.0	17.3	0.05	11.5	12.0	1.2	1	0	0	1	1	1	0	Special	lobe-specific	silk	protein	SSP160
VSP	PF03302.8	gi|479326546|ref|YP_007866602.1|	-	0.1	11.2	5.4	0.15	10.6	3.7	1.1	1	0	0	1	1	1	0	Giardia	variant-specific	surface	protein
DUF912	PF06024.7	gi|479326546|ref|YP_007866602.1|	-	0.11	12.5	0.1	0.24	11.4	0.1	1.5	1	0	0	1	1	1	0	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF912)
EssA	PF10661.4	gi|479326546|ref|YP_007866602.1|	-	1.1	8.8	4.3	1.9	8.1	3.0	1.3	1	0	0	1	1	1	0	WXG100	protein	secretion	system	(Wss),	protein	EssA
Shisa	PF13908.1	gi|479326546|ref|YP_007866602.1|	-	2.1	8.4	4.5	5.1	7.2	3.2	1.6	1	0	0	1	1	1	0	Wnt	and	FGF	inhibitory	regulator
TMEM154	PF15102.1	gi|479326546|ref|YP_007866602.1|	-	3	7.5	12.6	5.1	6.7	8.7	1.3	1	0	0	1	1	1	0	TMEM154	protein	family
OppC_N	PF12911.2	gi|479326546|ref|YP_007866602.1|	-	3.5	7.0	12.1	10	5.5	0.3	3.2	2	0	0	2	2	2	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
VMA21	PF09446.5	gi|479326546|ref|YP_007866602.1|	-	8.8	6.3	12.0	16	5.4	7.4	2.2	2	1	0	2	2	2	0	VMA21-like	domain
Lipase_GDSL_2	PF13472.1	gi|479326547|ref|YP_007866603.1|	-	1.5e-19	70.8	0.0	1.7e-19	70.6	0.0	1.0	1	0	0	1	1	1	1	GDSL-like	Lipase/Acylhydrolase	family
Lipase_GDSL	PF00657.17	gi|479326547|ref|YP_007866603.1|	-	3.2e-12	46.8	0.0	3.6e-12	46.6	0.0	1.0	1	0	0	1	1	1	1	GDSL-like	Lipase/Acylhydrolase
Glyco_hydro_31	PF01055.21	gi|479326548|ref|YP_007866604.1|	-	5e-140	467.2	0.2	6.1e-140	466.9	0.1	1.1	1	0	0	1	1	1	1	Glycosyl	hydrolases	family	31
Gal_mutarotas_2	PF13802.1	gi|479326548|ref|YP_007866604.1|	-	2.1e-18	65.9	0.0	6.2e-18	64.4	0.0	1.9	1	0	0	1	1	1	1	Galactose	mutarotase-like
AP_endonuc_2	PF01261.19	gi|479326549|ref|YP_007866605.1|	-	2.4e-23	82.5	0.2	5.1e-22	78.2	0.2	2.1	1	1	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
DUF1687	PF07955.6	gi|479326549|ref|YP_007866605.1|	-	0.011	15.6	0.0	0.016	15.1	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1687)
GARS_N	PF02844.10	gi|479326549|ref|YP_007866605.1|	-	0.027	14.9	0.0	0.05	14.0	0.0	1.4	1	0	0	1	1	1	0	Phosphoribosylglycinamide	synthetase,	N	domain
TroA	PF01297.12	gi|479326549|ref|YP_007866605.1|	-	0.1	11.8	0.0	0.22	10.7	0.0	1.5	1	1	1	2	2	2	0	Periplasmic	solute	binding	protein	family
GFO_IDH_MocA	PF01408.17	gi|479326550|ref|YP_007866606.1|	-	4.8e-30	104.5	0.3	1.2e-29	103.2	0.2	1.7	2	0	0	2	2	2	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
GFO_IDH_MocA_C	PF02894.12	gi|479326550|ref|YP_007866606.1|	-	2.4e-09	36.9	0.0	4.8e-09	36.0	0.0	1.5	1	0	0	1	1	1	1	Oxidoreductase	family,	C-terminal	alpha/beta	domain
NAD_binding_3	PF03447.11	gi|479326550|ref|YP_007866606.1|	-	7.3e-06	26.3	0.1	1.3e-05	25.5	0.1	1.4	1	0	0	1	1	1	1	Homoserine	dehydrogenase,	NAD	binding	domain
ox_reductase_C	PF08635.5	gi|479326550|ref|YP_007866606.1|	-	0.0011	18.4	0.2	0.62	9.4	0.0	2.4	1	1	1	2	2	2	2	Putative	oxidoreductase	C	terminal
Semialdhyde_dh	PF01118.19	gi|479326550|ref|YP_007866606.1|	-	0.0075	16.5	0.3	0.016	15.4	0.2	1.5	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.14	gi|479326550|ref|YP_007866606.1|	-	0.039	13.0	0.1	0.067	12.3	0.0	1.3	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
BPD_transp_1	PF00528.17	gi|479326551|ref|YP_007866607.1|	-	2.3e-40	138.0	15.7	2.3e-40	138.0	10.9	1.9	3	0	0	3	3	3	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.17	gi|479326552|ref|YP_007866608.1|	-	5e-14	52.2	20.3	5e-14	52.2	14.1	1.9	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.2	gi|479326552|ref|YP_007866608.1|	-	0.00029	20.1	0.1	0.00029	20.1	0.1	2.3	2	0	0	2	2	2	1	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
DUF3976	PF13121.1	gi|479326552|ref|YP_007866608.1|	-	1.9	8.3	5.5	6.5	6.6	0.2	2.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3976)
ABC_tran	PF00005.22	gi|479326553|ref|YP_007866609.1|	-	6.6e-28	97.7	0.0	9.3e-28	97.2	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|479326553|ref|YP_007866609.1|	-	8.5e-18	64.4	0.1	1.5e-17	63.7	0.1	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|479326553|ref|YP_007866609.1|	-	1.5e-13	51.3	1.0	7.6e-10	39.2	0.1	2.2	1	1	1	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|479326553|ref|YP_007866609.1|	-	4.5e-07	29.2	3.2	3.6e-05	22.9	0.5	2.2	1	1	0	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|479326553|ref|YP_007866609.1|	-	1.1e-05	24.7	0.9	3e-05	23.3	0.6	1.6	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|479326553|ref|YP_007866609.1|	-	0.00022	21.6	0.5	0.00041	20.7	0.3	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|479326553|ref|YP_007866609.1|	-	0.00051	19.5	0.1	0.0011	18.4	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_25	PF13481.1	gi|479326553|ref|YP_007866609.1|	-	0.0011	18.3	0.0	0.0067	15.8	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_10	PF12846.2	gi|479326553|ref|YP_007866609.1|	-	0.003	17.0	0.1	0.0052	16.2	0.0	1.4	1	1	0	1	1	1	1	AAA-like	domain
PRK	PF00485.13	gi|479326553|ref|YP_007866609.1|	-	0.016	14.8	0.0	0.027	14.0	0.0	1.4	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_16	PF13191.1	gi|479326553|ref|YP_007866609.1|	-	0.017	15.1	0.0	0.025	14.5	0.0	1.2	1	0	0	1	1	1	0	AAA	ATPase	domain
KaiC	PF06745.8	gi|479326553|ref|YP_007866609.1|	-	0.033	13.2	0.9	0.14	11.2	0.1	2.0	2	0	0	2	2	2	0	KaiC
AAA_22	PF13401.1	gi|479326553|ref|YP_007866609.1|	-	0.037	14.1	3.6	0.49	10.5	2.5	2.2	1	1	0	1	1	1	0	AAA	domain
NB-ARC	PF00931.17	gi|479326553|ref|YP_007866609.1|	-	0.051	12.4	0.1	0.095	11.5	0.1	1.3	1	0	0	1	1	1	0	NB-ARC	domain
AAA_24	PF13479.1	gi|479326553|ref|YP_007866609.1|	-	0.059	12.9	1.9	5.4	6.5	0.1	3.0	3	0	0	3	3	3	0	AAA	domain
DUF258	PF03193.11	gi|479326553|ref|YP_007866609.1|	-	0.06	12.5	0.0	0.098	11.8	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
DUF87	PF01935.12	gi|479326553|ref|YP_007866609.1|	-	0.085	12.6	0.7	0.15	11.8	0.4	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	DUF87
AAA_18	PF13238.1	gi|479326553|ref|YP_007866609.1|	-	0.099	12.9	0.1	0.59	10.4	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|479326553|ref|YP_007866609.1|	-	0.11	11.9	0.1	0.22	10.9	0.1	1.4	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
AAA_17	PF13207.1	gi|479326553|ref|YP_007866609.1|	-	0.16	12.8	0.3	0.28	12.0	0.2	1.8	1	1	0	1	1	1	0	AAA	domain
AAA_13	PF13166.1	gi|479326553|ref|YP_007866609.1|	-	0.18	10.1	1.6	6.8	5.0	0.5	2.2	2	0	0	2	2	2	0	AAA	domain
CbiA	PF01656.18	gi|479326553|ref|YP_007866609.1|	-	7.7	5.8	6.9	3.4	7.0	1.0	2.3	2	1	0	2	2	2	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ABC_tran	PF00005.22	gi|479326554|ref|YP_007866610.1|	-	3.8e-28	98.5	0.0	5e-28	98.0	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|479326554|ref|YP_007866610.1|	-	1.2e-07	31.9	0.1	2.5e-07	30.9	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
oligo_HPY	PF08352.7	gi|479326554|ref|YP_007866610.1|	-	5.8e-07	29.7	0.1	1.1e-06	28.8	0.1	1.5	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
SMC_N	PF02463.14	gi|479326554|ref|YP_007866610.1|	-	0.019	14.1	0.0	0.029	13.5	0.0	1.3	1	0	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
SbcCD_C	PF13558.1	gi|479326554|ref|YP_007866610.1|	-	0.072	13.0	0.3	1.6	8.6	0.0	2.6	2	1	0	2	2	2	0	Putative	exonuclease	SbcCD,	C	subunit
PhoH	PF02562.11	gi|479326554|ref|YP_007866610.1|	-	0.085	12.0	0.1	0.43	9.7	0.1	2.0	2	0	0	2	2	2	0	PhoH-like	protein
AAA_33	PF13671.1	gi|479326554|ref|YP_007866610.1|	-	0.18	11.6	0.2	1.1	9.1	0.1	2.1	1	1	0	1	1	1	0	AAA	domain
SBP_bac_5	PF00496.17	gi|479326555|ref|YP_007866611.1|	-	1.7e-76	257.5	10.0	3.5e-76	256.4	7.0	1.5	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
Rifin_STEVOR	PF02009.11	gi|479326555|ref|YP_007866611.1|	-	0.00034	20.3	7.3	0.00052	19.7	5.1	1.2	1	0	0	1	1	1	1	Rifin/stevor	family
MGC-24	PF05283.6	gi|479326555|ref|YP_007866611.1|	-	0.081	12.7	25.0	0.13	12.0	17.3	1.2	1	0	0	1	1	1	0	Multi-glycosylated	core	protein	24	(MGC-24)
TMEM154	PF15102.1	gi|479326555|ref|YP_007866611.1|	-	3.7	7.2	28.1	11	5.6	19.5	1.9	1	1	0	1	1	1	0	TMEM154	protein	family
DUF1180	PF06679.7	gi|479326555|ref|YP_007866611.1|	-	5.3	6.9	9.7	20	5.0	6.3	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1180)
ADH_N	PF08240.7	gi|479326556|ref|YP_007866612.1|	-	7.3e-20	70.7	0.3	1.2e-19	70.1	0.2	1.3	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
FAD_binding_3	PF01494.14	gi|479326556|ref|YP_007866612.1|	-	0.0029	16.7	0.0	0.0045	16.0	0.0	1.2	1	0	0	1	1	1	1	FAD	binding	domain
DUF1188	PF06690.6	gi|479326556|ref|YP_007866612.1|	-	0.0071	15.5	0.0	0.012	14.7	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1188)
Shikimate_DH	PF01488.15	gi|479326556|ref|YP_007866612.1|	-	0.0075	16.3	0.0	0.021	14.8	0.0	1.7	2	0	0	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
SGL	PF08450.7	gi|479326557|ref|YP_007866613.1|	-	1.9e-75	253.4	0.0	2.1e-75	253.2	0.0	1.0	1	0	0	1	1	1	1	SMP-30/Gluconolaconase/LRE-like	region
Arylesterase	PF01731.15	gi|479326557|ref|YP_007866613.1|	-	0.11	12.4	0.0	0.31	11.0	0.0	1.8	1	0	0	1	1	1	0	Arylesterase
DUF608	PF04685.8	gi|479326558|ref|YP_007866614.1|	-	5.6e-95	318.1	2.4	5.6e-95	318.1	1.7	1.8	2	0	0	2	2	2	1	Protein	of	unknown	function,	DUF608
GBA2_N	PF12215.3	gi|479326558|ref|YP_007866614.1|	-	8.1e-50	169.6	0.6	1.4e-49	168.8	0.4	1.4	1	0	0	1	1	1	1	beta-Glucocerebrosidase	2	N	terminal
Glyco_hydro_2_C	PF02836.12	gi|479326559|ref|YP_007866615.1|	-	6e-68	228.9	0.1	9e-68	228.3	0.1	1.2	1	0	0	1	1	1	1	Glycosyl	hydrolases	family	2,	TIM	barrel	domain
Glyco_hydro_2_N	PF02837.13	gi|479326559|ref|YP_007866615.1|	-	2.8e-30	105.0	2.3	5e-30	104.2	1.3	1.7	2	0	0	2	2	2	1	Glycosyl	hydrolases	family	2,	sugar	binding	domain
Glyco_hydro_2	PF00703.16	gi|479326559|ref|YP_007866615.1|	-	1.1e-12	48.3	0.1	3.3e-12	46.8	0.0	1.9	2	0	0	2	2	2	1	Glycosyl	hydrolases	family	2
BetaGal_dom4_5	PF13364.1	gi|479326559|ref|YP_007866615.1|	-	0.00046	20.4	0.4	0.00095	19.4	0.3	1.5	1	0	0	1	1	1	1	Beta-galactosidase	jelly	roll	domain
Cellulase	PF00150.13	gi|479326559|ref|YP_007866615.1|	-	0.011	15.0	2.8	0.06	12.5	0.2	2.6	2	1	0	2	2	2	0	Cellulase	(glycosyl	hydrolase	family	5)
Cellulase-like	PF12876.2	gi|479326559|ref|YP_007866615.1|	-	0.016	15.6	0.1	0.14	12.5	0.0	2.7	2	1	0	2	2	2	0	Sugar-binding	cellulase-like
DHDPS	PF00701.17	gi|479326560|ref|YP_007866616.1|	-	5.7e-38	130.1	0.0	6.8e-38	129.9	0.0	1.0	1	0	0	1	1	1	1	Dihydrodipicolinate	synthetase	family
CENP-B_N	PF04218.8	gi|479326560|ref|YP_007866616.1|	-	0.0057	16.0	0.2	0.037	13.4	0.0	2.2	2	0	0	2	2	2	1	CENP-B	N-terminal	DNA-binding	domain
Cas_Csn2	PF09711.5	gi|479326560|ref|YP_007866616.1|	-	0.022	14.4	0.1	0.044	13.4	0.1	1.5	1	0	0	1	1	1	0	CRISPR-associated	protein	(Cas_Csn2)
OrfB_Zn_ribbon	PF07282.6	gi|479327032|ref|YP_007866617.1|	-	8.7e-22	76.5	3.3	8.8e-22	76.5	0.2	2.5	3	0	0	3	3	3	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|479327032|ref|YP_007866617.1|	-	2.3e-08	33.7	0.5	4e-08	32.9	0.1	1.6	2	0	0	2	2	2	1	Probable	transposase
zf-RING_4	PF14570.1	gi|479327032|ref|YP_007866617.1|	-	0.099	12.2	3.3	0.074	12.6	1.1	1.6	2	0	0	2	2	2	0	RING/Ubox	like	zinc-binding	domain
Glyco_hydro_3	PF00933.16	gi|479326561|ref|YP_007866618.1|	-	1.4e-79	267.1	0.0	1.8e-79	266.8	0.0	1.1	1	0	0	1	1	1	1	Glycosyl	hydrolase	family	3	N	terminal	domain
Glyco_hydro_3_C	PF01915.17	gi|479326561|ref|YP_007866618.1|	-	1.5e-71	240.5	0.0	2.2e-71	240.0	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	hydrolase	family	3	C-terminal	domain
Fn3-like	PF14310.1	gi|479326561|ref|YP_007866618.1|	-	1e-23	83.0	0.0	1.8e-23	82.2	0.0	1.4	1	0	0	1	1	1	1	Fibronectin	type	III-like	domain
CARDB	PF07705.6	gi|479326561|ref|YP_007866618.1|	-	0.037	14.0	0.0	0.082	12.9	0.0	1.5	1	0	0	1	1	1	0	CARDB
Peptidase_S9	PF00326.16	gi|479326562|ref|YP_007866619.1|	-	0.00012	21.3	0.0	0.00012	21.3	0.0	1.0	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
Abhydrolase_5	PF12695.2	gi|479326562|ref|YP_007866619.1|	-	0.0039	16.9	0.0	0.0047	16.6	0.0	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
UPF0227	PF05728.7	gi|479326562|ref|YP_007866619.1|	-	0.018	14.7	0.0	0.018	14.7	0.0	1.2	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0227)
UPF0122	PF04297.9	gi|479326562|ref|YP_007866619.1|	-	0.042	13.8	0.1	0.061	13.3	0.1	1.3	1	0	0	1	1	1	0	Putative	helix-turn-helix	protein,	YlxM	/	p13	like
AP_endonuc_2	PF01261.19	gi|479326563|ref|YP_007866620.1|	-	6.5e-30	104.0	0.0	8.8e-30	103.5	0.0	1.2	1	0	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
PIN	PF01850.16	gi|479326565|ref|YP_007866622.1|	-	5.4e-06	26.7	0.0	7.7e-06	26.2	0.0	1.3	1	0	0	1	1	1	1	PIN	domain
CcdA	PF07362.7	gi|479326566|ref|YP_007866623.1|	-	0.0014	18.4	1.6	0.0019	18.0	1.1	1.2	1	0	0	1	1	1	1	Post-segregation	antitoxin	CcdA
CENP-F_leu_zip	PF10473.4	gi|479326566|ref|YP_007866623.1|	-	0.0093	15.8	2.6	0.011	15.6	1.8	1.0	1	0	0	1	1	1	1	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Vhr1	PF04001.8	gi|479326566|ref|YP_007866623.1|	-	0.013	15.4	0.2	0.015	15.1	0.1	1.2	1	0	0	1	1	1	0	Transcription	factor	Vhr1
RHH_1	PF01402.16	gi|479326566|ref|YP_007866623.1|	-	0.083	12.8	5.3	0.12	12.2	0.5	2.9	2	1	0	2	2	2	0	Ribbon-helix-helix	protein,	copG	family
Imm2	PF14426.1	gi|479326566|ref|YP_007866623.1|	-	0.093	12.7	0.5	0.18	11.8	0.1	1.7	1	1	1	2	2	2	0	Immunity	protein	Imm2
Pox_VLTF3	PF04947.9	gi|479326566|ref|YP_007866623.1|	-	0.13	11.7	1.9	0.16	11.4	1.3	1.1	1	0	0	1	1	1	0	Poxvirus	Late	Transcription	Factor	VLTF3	like
Kri1	PF05178.7	gi|479326566|ref|YP_007866623.1|	-	2.5	8.4	5.2	3.4	7.9	3.6	1.4	1	1	0	1	1	1	0	KRI1-like	family
Bac_rhamnosid	PF05592.6	gi|479326567|ref|YP_007866624.1|	-	2e-152	507.9	0.0	3e-152	507.3	0.0	1.1	1	0	0	1	1	1	1	Bacterial	alpha-L-rhamnosidase
Bac_rhamnosid_N	PF08531.5	gi|479326567|ref|YP_007866624.1|	-	2.7e-47	160.4	0.0	4.9e-47	159.6	0.0	1.4	1	0	0	1	1	1	1	Alpha-L-rhamnosidase	N-terminal	domain
Glyco_hydro_31	PF01055.21	gi|479326572|ref|YP_007866629.1|	-	1.3e-136	455.9	1.4	1.7e-136	455.6	1.0	1.1	1	0	0	1	1	1	1	Glycosyl	hydrolases	family	31
Gal_mutarotas_2	PF13802.1	gi|479326572|ref|YP_007866629.1|	-	5e-07	29.4	0.5	5e-07	29.4	0.3	2.8	3	1	0	3	3	3	1	Galactose	mutarotase-like
Glyco_hydro_1	PF00232.13	gi|479326574|ref|YP_007866631.1|	-	1e-64	218.4	5.3	7.4e-58	195.8	1.3	2.4	2	1	0	2	2	2	2	Glycosyl	hydrolase	family	1
Cellulase	PF00150.13	gi|479326574|ref|YP_007866631.1|	-	3.3e-05	23.2	0.0	5.9e-05	22.4	0.0	1.4	1	0	0	1	1	1	1	Cellulase	(glycosyl	hydrolase	family	5)
MFS_1	PF07690.11	gi|479326575|ref|YP_007866632.1|	-	1.1e-13	50.6	19.7	2.1e-09	36.5	4.9	2.0	2	0	0	2	2	2	2	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|479326575|ref|YP_007866632.1|	-	0.00032	18.9	1.1	0.00032	18.9	0.8	1.6	1	1	1	2	2	2	1	Transmembrane	secretion	effector
FA_desaturase	PF00487.19	gi|479326575|ref|YP_007866632.1|	-	0.82	9.0	6.9	1.6	8.1	0.5	2.3	1	1	1	2	2	2	0	Fatty	acid	desaturase
Amidohydro_2	PF04909.9	gi|479326577|ref|YP_007866634.1|	-	6.7e-40	137.3	0.0	8.3e-40	137.0	0.0	1.1	1	0	0	1	1	1	1	Amidohydrolase
TatD_DNase	PF01026.16	gi|479326577|ref|YP_007866634.1|	-	3.5e-05	23.1	0.0	6.6e-05	22.2	0.0	1.4	1	1	0	1	1	1	1	TatD	related	DNase
GFO_IDH_MocA	PF01408.17	gi|479326578|ref|YP_007866635.1|	-	3e-28	98.7	0.0	4.8e-28	98.0	0.0	1.3	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
NAD_binding_3	PF03447.11	gi|479326578|ref|YP_007866635.1|	-	0.061	13.7	0.1	0.15	12.4	0.1	1.6	1	0	0	1	1	1	0	Homoserine	dehydrogenase,	NAD	binding	domain
Aldo_ket_red	PF00248.16	gi|479326580|ref|YP_007866637.1|	-	1.4e-72	243.8	0.1	1.6e-72	243.7	0.1	1.0	1	0	0	1	1	1	1	Aldo/keto	reductase	family
Terminase_4	PF05119.7	gi|479326580|ref|YP_007866637.1|	-	0.11	12.6	0.0	0.4	10.8	0.0	1.9	1	1	0	1	1	1	0	Phage	terminase,	small	subunit
GFO_IDH_MocA	PF01408.17	gi|479326581|ref|YP_007866638.1|	-	8.4e-17	61.8	0.1	1.4e-16	61.1	0.0	1.3	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
GFO_IDH_MocA_C	PF02894.12	gi|479326581|ref|YP_007866638.1|	-	3.6e-07	29.9	0.0	5.8e-07	29.3	0.0	1.4	1	0	0	1	1	1	1	Oxidoreductase	family,	C-terminal	alpha/beta	domain
Laminin_B	PF00052.13	gi|479326581|ref|YP_007866638.1|	-	0.12	12.0	0.0	0.2	11.2	0.0	1.3	1	0	0	1	1	1	0	Laminin	B	(Domain	IV)
COG4	PF08318.7	gi|479326581|ref|YP_007866638.1|	-	0.13	11.0	0.0	0.19	10.4	0.0	1.2	1	0	0	1	1	1	0	COG4	transport	protein
DUF1854	PF08909.6	gi|479326582|ref|YP_007866639.1|	-	7.2e-46	155.0	2.8	1.1e-45	154.5	0.4	2.4	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1854)
ABC_membrane	PF00664.18	gi|479326582|ref|YP_007866639.1|	-	1.3e-42	146.1	7.9	1.3e-42	146.1	5.5	1.4	2	0	0	2	2	1	1	ABC	transporter	transmembrane	region
ABC_tran	PF00005.22	gi|479326582|ref|YP_007866639.1|	-	1.8e-35	122.2	0.0	5.4e-35	120.6	0.0	1.9	2	0	0	2	2	1	1	ABC	transporter
AAA_17	PF13207.1	gi|479326582|ref|YP_007866639.1|	-	3.8e-05	24.4	3.3	4.2e-05	24.3	0.1	2.8	3	0	0	3	3	1	1	AAA	domain
SMC_N	PF02463.14	gi|479326582|ref|YP_007866639.1|	-	9e-05	21.7	1.9	0.014	14.6	0.0	2.5	1	1	1	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
AAA_10	PF12846.2	gi|479326582|ref|YP_007866639.1|	-	0.00018	21.0	0.1	0.049	13.0	0.0	3.8	4	1	0	4	4	4	1	AAA-like	domain
ABC_membrane_3	PF13748.1	gi|479326582|ref|YP_007866639.1|	-	0.00042	19.4	5.1	0.0006	18.9	2.0	2.2	2	1	0	2	2	2	1	ABC	transporter	transmembrane	region
DUF87	PF01935.12	gi|479326582|ref|YP_007866639.1|	-	0.0011	18.7	0.2	0.0049	16.7	0.0	2.2	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF87
AAA_29	PF13555.1	gi|479326582|ref|YP_007866639.1|	-	0.0013	18.2	0.1	0.0031	16.9	0.1	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.1	gi|479326582|ref|YP_007866639.1|	-	0.0014	18.7	0.8	0.029	14.4	0.1	3.0	2	1	0	2	2	1	1	AAA	domain
AAA_18	PF13238.1	gi|479326582|ref|YP_007866639.1|	-	0.0028	17.9	0.5	0.0028	17.9	0.4	3.7	3	1	1	4	4	4	1	AAA	domain
ATP-synt_ab	PF00006.20	gi|479326582|ref|YP_007866639.1|	-	0.015	14.8	0.1	2.1	7.7	0.0	2.4	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_5	PF07728.9	gi|479326582|ref|YP_007866639.1|	-	0.034	13.8	0.1	0.84	9.3	0.0	3.0	3	1	0	3	3	3	0	AAA	domain	(dynein-related	subfamily)
FtsK_SpoIIIE	PF01580.13	gi|479326582|ref|YP_007866639.1|	-	0.041	13.3	0.0	0.15	11.5	0.0	1.9	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
RNA_helicase	PF00910.17	gi|479326582|ref|YP_007866639.1|	-	0.043	14.0	4.4	1.2	9.2	0.0	3.2	3	1	0	3	3	2	0	RNA	helicase
Zeta_toxin	PF06414.7	gi|479326582|ref|YP_007866639.1|	-	0.053	12.6	0.0	0.25	10.4	0.0	2.1	2	0	0	2	2	2	0	Zeta	toxin
DUF258	PF03193.11	gi|479326582|ref|YP_007866639.1|	-	0.059	12.5	0.0	0.11	11.6	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
MobB	PF03205.9	gi|479326582|ref|YP_007866639.1|	-	0.06	13.0	1.4	0.12	12.0	0.0	2.2	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
MMR_HSR1	PF01926.18	gi|479326582|ref|YP_007866639.1|	-	0.063	13.2	1.1	0.4	10.6	0.0	2.8	2	1	0	2	2	2	0	50S	ribosome-binding	GTPase
AAA_16	PF13191.1	gi|479326582|ref|YP_007866639.1|	-	0.069	13.1	0.0	0.4	10.6	0.0	2.1	2	0	0	2	2	2	0	AAA	ATPase	domain
Phage_CI_repr	PF07022.8	gi|479326582|ref|YP_007866639.1|	-	0.11	12.6	0.0	0.29	11.2	0.0	1.7	1	0	0	1	1	1	0	Bacteriophage	CI	repressor	helix-turn-helix	domain
AAA_23	PF13476.1	gi|479326582|ref|YP_007866639.1|	-	0.11	12.7	0.0	0.11	12.7	0.0	3.3	3	0	0	3	3	3	0	AAA	domain
AAA_25	PF13481.1	gi|479326582|ref|YP_007866639.1|	-	0.14	11.5	0.0	0.58	9.5	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
AAA_33	PF13671.1	gi|479326582|ref|YP_007866639.1|	-	0.15	11.9	0.0	0.4	10.5	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
CbiA	PF01656.18	gi|479326582|ref|YP_007866639.1|	-	0.17	11.2	0.1	0.17	11.2	0.0	2.3	3	0	0	3	3	3	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ChlamPMP_M	PF07548.6	gi|479326582|ref|YP_007866639.1|	-	0.21	11.3	0.6	0.98	9.1	0.0	2.1	2	0	0	2	2	2	0	Chlamydia	polymorphic	membrane	protein	middle	domain
GFO_IDH_MocA	PF01408.17	gi|479326583|ref|YP_007866640.1|	-	4.6e-23	82.0	0.0	6.9e-23	81.4	0.0	1.3	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
GFO_IDH_MocA_C	PF02894.12	gi|479326583|ref|YP_007866640.1|	-	2.9e-07	30.2	0.0	7.2e-07	28.9	0.0	1.7	1	0	0	1	1	1	1	Oxidoreductase	family,	C-terminal	alpha/beta	domain
Cutinase	PF01083.17	gi|479326583|ref|YP_007866640.1|	-	0.057	13.1	0.0	0.096	12.4	0.0	1.3	1	0	0	1	1	1	0	Cutinase
TRSP	PF12500.3	gi|479326583|ref|YP_007866640.1|	-	0.1	12.0	0.0	0.2	11.1	0.0	1.4	1	0	0	1	1	1	0	TRSP	domain	C	terminus	to	PRTase_2
MFS_1	PF07690.11	gi|479326584|ref|YP_007866641.1|	-	3.4e-18	65.4	42.8	1.3e-10	40.5	10.5	2.0	2	0	0	2	2	2	2	Major	Facilitator	Superfamily
Ald_Xan_dh_C2	PF02738.13	gi|479326585|ref|YP_007866642.1|	-	4.1e-121	405.0	0.0	5.2e-121	404.6	0.0	1.0	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|479326585|ref|YP_007866642.1|	-	3.9e-17	62.3	1.0	2.7e-15	56.3	0.3	3.0	2	1	0	2	2	2	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
GFO_IDH_MocA	PF01408.17	gi|479326586|ref|YP_007866643.1|	-	1.3e-14	54.7	0.0	2.3e-14	53.9	0.0	1.4	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
GFO_IDH_MocA_C	PF02894.12	gi|479326586|ref|YP_007866643.1|	-	0.027	14.2	0.0	0.053	13.3	0.0	1.5	1	0	0	1	1	1	0	Oxidoreductase	family,	C-terminal	alpha/beta	domain
G6PD_N	PF00479.17	gi|479326586|ref|YP_007866643.1|	-	0.094	12.9	0.0	0.17	12.1	0.0	1.4	1	0	0	1	1	1	0	Glucose-6-phosphate	dehydrogenase,	NAD	binding	domain
DUF4434	PF14488.1	gi|479326587|ref|YP_007866644.1|	-	8.2e-07	28.8	0.0	2e-06	27.6	0.0	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4434)
Cellulase	PF00150.13	gi|479326587|ref|YP_007866644.1|	-	4.3e-06	26.1	0.0	7.2e-06	25.4	0.0	1.3	1	0	0	1	1	1	1	Cellulase	(glycosyl	hydrolase	family	5)
Glyco_hydro_42M	PF08532.5	gi|479326587|ref|YP_007866644.1|	-	2.4e-05	23.5	0.0	4.1e-05	22.8	0.0	1.3	1	0	0	1	1	1	1	Beta-galactosidase	trimerisation	domain
Glyco_hydro_42	PF02449.10	gi|479326587|ref|YP_007866644.1|	-	0.00082	18.5	0.0	0.01	14.9	0.0	2.1	2	0	0	2	2	2	1	Beta-galactosidase
Glyco_hydro_72	PF03198.9	gi|479326587|ref|YP_007866644.1|	-	0.015	14.3	0.0	0.059	12.3	0.0	1.9	1	1	0	1	1	1	0	Glucanosyltransferase
Glyco_hydro_38	PF01074.17	gi|479326588|ref|YP_007866645.1|	-	2.4e-75	253.3	0.0	3.7e-75	252.7	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	hydrolases	family	38	N-terminal	domain
Glyco_hydro_38C	PF07748.8	gi|479326588|ref|YP_007866645.1|	-	3e-74	250.4	3.5	5.8e-74	249.5	2.4	1.5	1	1	0	1	1	1	1	Glycosyl	hydrolases	family	38	C-terminal	domain
Alpha-mann_mid	PF09261.6	gi|479326588|ref|YP_007866645.1|	-	1.9e-18	66.3	0.1	4.2e-18	65.3	0.1	1.6	1	0	0	1	1	1	1	Alpha	mannosidase,	middle	domain
CIA30	PF08547.7	gi|479326588|ref|YP_007866645.1|	-	0.066	13.0	0.0	0.26	11.1	0.0	2.0	2	0	0	2	2	2	0	Complex	I	intermediate-associated	protein	30	(CIA30)
adh_short	PF00106.20	gi|479326589|ref|YP_007866646.1|	-	1.3e-29	103.2	0.0	2.4e-29	102.4	0.0	1.4	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|479326589|ref|YP_007866646.1|	-	1.7e-25	90.2	0.0	2.4e-25	89.6	0.0	1.2	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|479326589|ref|YP_007866646.1|	-	5.4e-09	35.9	0.0	8.5e-09	35.3	0.0	1.3	1	0	0	1	1	1	1	KR	domain
DUF1776	PF08643.5	gi|479326589|ref|YP_007866646.1|	-	0.0004	19.6	0.2	0.041	13.0	0.0	2.5	3	0	0	3	3	3	1	Fungal	family	of	unknown	function	(DUF1776)
Epimerase	PF01370.16	gi|479326589|ref|YP_007866646.1|	-	0.003	17.0	0.2	0.0052	16.2	0.1	1.5	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
Choline_kin_N	PF04428.9	gi|479326589|ref|YP_007866646.1|	-	0.1	12.0	0.0	0.52	9.8	0.0	2.1	2	0	0	2	2	2	0	Choline	kinase	N	terminus
Phage_int_SAM_5	PF13102.1	gi|479326590|ref|YP_007866647.1|	-	0.0023	17.9	0.1	0.0034	17.4	0.0	1.2	1	0	0	1	1	1	1	Phage	integrase	SAM-like	domain
ADH_N	PF08240.7	gi|479326591|ref|YP_007866648.1|	-	1.3e-16	60.3	0.0	2e-16	59.6	0.0	1.3	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
Shikimate_DH	PF01488.15	gi|479326591|ref|YP_007866648.1|	-	5.7e-05	23.2	0.0	0.00022	21.3	0.0	1.8	2	0	0	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
FAD_binding_3	PF01494.14	gi|479326591|ref|YP_007866648.1|	-	0.0068	15.4	0.0	0.011	14.8	0.0	1.2	1	0	0	1	1	1	1	FAD	binding	domain
2-Hacid_dh_C	PF02826.14	gi|479326591|ref|YP_007866648.1|	-	0.019	14.1	0.0	0.053	12.6	0.0	1.8	2	0	0	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
DapB_N	PF01113.15	gi|479326591|ref|YP_007866648.1|	-	0.064	13.1	0.0	0.12	12.3	0.0	1.5	1	0	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
Glyco_tranf_2_3	PF13641.1	gi|479326592|ref|YP_007866649.1|	-	1.6e-19	70.6	0.0	2.2e-19	70.1	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|479326592|ref|YP_007866649.1|	-	4.3e-16	59.2	0.2	4.3e-16	59.2	0.1	2.4	3	0	0	3	3	3	1	Glycosyl	transferase	family	group	2
Glycos_transf_2	PF00535.21	gi|479326592|ref|YP_007866649.1|	-	7.1e-15	55.0	0.1	1.2e-14	54.3	0.1	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.1	gi|479326592|ref|YP_007866649.1|	-	3.4e-11	42.7	0.0	7.1e-11	41.7	0.0	1.4	1	1	0	1	1	1	1	Glycosyl	transferase	family	21
DUF2517	PF10725.4	gi|479326592|ref|YP_007866649.1|	-	0.064	12.9	1.0	0.13	11.9	0.7	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2517)
DUF4293	PF14126.1	gi|479326592|ref|YP_007866649.1|	-	1.8	8.4	8.9	0.81	9.5	2.0	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4293)
Chitin_synth_2	PF03142.10	gi|479326592|ref|YP_007866649.1|	-	3.6	5.8	12.6	0.089	11.1	0.8	3.4	3	1	0	3	3	3	0	Chitin	synthase
Cpn60_TCP1	PF00118.19	gi|479326593|ref|YP_007866650.1|	-	3.6e-146	487.5	16.9	4.2e-146	487.3	11.7	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
MR_MLE_C	PF13378.1	gi|479326594|ref|YP_007866651.1|	-	5.1e-24	84.3	0.0	1.2e-23	83.1	0.0	1.7	1	0	0	1	1	1	1	Enolase	C-terminal	domain-like
MR_MLE	PF01188.16	gi|479326594|ref|YP_007866651.1|	-	3.4e-16	59.5	0.0	4.8e-15	55.8	0.0	2.3	2	0	0	2	2	2	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
MR_MLE_N	PF02746.11	gi|479326594|ref|YP_007866651.1|	-	7.7e-11	42.0	0.0	1.3e-10	41.3	0.0	1.3	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	N-terminal	domain
Flu_NS2	PF00601.14	gi|479326594|ref|YP_007866651.1|	-	0.15	12.2	0.0	0.55	10.4	0.0	1.9	2	0	0	2	2	2	0	Influenza	non-structural	protein	(NS2)
3HCDH_N	PF02737.13	gi|479326595|ref|YP_007866652.1|	-	1.5e-66	223.4	0.2	2.3e-66	222.8	0.1	1.2	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
3HCDH	PF00725.17	gi|479326595|ref|YP_007866652.1|	-	1.5e-40	137.5	0.1	6.6e-27	93.7	0.0	2.8	3	0	0	3	3	3	2	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
NAD_binding_2	PF03446.10	gi|479326595|ref|YP_007866652.1|	-	1.8e-05	24.6	0.0	4e-05	23.4	0.0	1.6	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.18	gi|479326595|ref|YP_007866652.1|	-	1.9e-05	24.4	0.0	3.8e-05	23.4	0.0	1.6	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
F420_oxidored	PF03807.12	gi|479326595|ref|YP_007866652.1|	-	0.00093	19.5	0.0	0.0024	18.2	0.0	1.7	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
UDPG_MGDP_dh_N	PF03721.9	gi|479326595|ref|YP_007866652.1|	-	0.0077	15.6	0.1	0.016	14.6	0.0	1.6	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
2-Hacid_dh_C	PF02826.14	gi|479326595|ref|YP_007866652.1|	-	0.049	12.7	0.3	0.2	10.8	0.2	2.0	1	1	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Pyr_redox	PF00070.22	gi|479326595|ref|YP_007866652.1|	-	0.11	12.9	0.1	0.44	10.9	0.0	2.1	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Methyltransf_18	PF12847.2	gi|479326595|ref|YP_007866652.1|	-	0.15	12.6	0.0	0.34	11.5	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
Nramp	PF01566.13	gi|479326596|ref|YP_007866653.1|	-	3.6e-41	141.1	22.4	4.8e-41	140.7	15.5	1.2	1	0	0	1	1	1	1	Natural	resistance-associated	macrophage	protein
DUF418	PF04235.7	gi|479326596|ref|YP_007866653.1|	-	4.3	6.9	14.0	0.043	13.4	2.4	3.0	1	1	2	4	4	4	0	Protein	of	unknown	function	(DUF418)
DUF3954	PF13128.1	gi|479326597|ref|YP_007866654.1|	-	7	6.1	6.6	2.4	7.6	0.9	2.8	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3954)
PRA1	PF03208.14	gi|479326598|ref|YP_007866655.1|	-	0.28	10.5	6.8	0.068	12.5	1.6	1.9	2	0	0	2	2	2	0	PRA1	family	protein
GHMP_kinases_N	PF00288.21	gi|479326600|ref|YP_007866657.1|	-	7.7e-10	38.6	0.3	1.5e-09	37.7	0.2	1.4	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_N	PF00288.21	gi|479326601|ref|YP_007866658.1|	-	8.1e-14	51.4	0.5	2.4e-13	49.9	0.1	1.9	2	0	0	2	2	2	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|479326601|ref|YP_007866658.1|	-	9.9e-07	28.8	0.4	3.5e-06	27.1	0.3	2.0	1	1	0	1	1	1	1	GHMP	kinases	C	terminal
TrmB	PF01978.14	gi|479326602|ref|YP_007866659.1|	-	0.00056	19.5	0.4	1.1	8.9	0.0	2.8	2	1	0	2	2	2	2	Sugar-specific	transcriptional	regulator	TrmB
Penicillinase_R	PF03965.11	gi|479326602|ref|YP_007866659.1|	-	0.002	18.1	0.5	0.022	14.8	0.0	2.6	1	1	2	3	3	3	1	Penicillinase	repressor
TINF2_N	PF14973.1	gi|479326602|ref|YP_007866659.1|	-	0.0031	17.6	0.5	0.0066	16.5	0.3	1.5	1	0	0	1	1	1	1	TERF1-interacting	nuclear	factor	2	N-terminus
Phage_Nu1	PF07471.7	gi|479326602|ref|YP_007866659.1|	-	0.011	15.1	0.1	0.031	13.7	0.1	1.7	2	0	0	2	2	2	0	Phage	DNA	packaging	protein	Nu1
AKNA	PF12443.3	gi|479326602|ref|YP_007866659.1|	-	0.024	14.6	0.7	0.044	13.8	0.1	1.8	2	0	0	2	2	2	0	AT-hook-containing	transcription	factor
ACDC	PF14733.1	gi|479326602|ref|YP_007866659.1|	-	0.035	14.2	0.8	0.11	12.5	0.3	2.2	2	1	0	2	2	2	0	AP2-coincident	C-terminal
DUF4456	PF14644.1	gi|479326602|ref|YP_007866659.1|	-	0.12	11.5	2.0	4.1	6.5	0.3	2.8	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4456)
EF-hand_2	PF09068.6	gi|479326602|ref|YP_007866659.1|	-	0.13	12.2	0.6	0.26	11.3	0.3	1.6	1	1	0	1	1	1	0	EF	hand
DUF327	PF03885.8	gi|479326602|ref|YP_007866659.1|	-	0.15	11.8	5.6	0.99	9.2	0.6	2.3	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF327)
Fib_alpha	PF08702.5	gi|479326602|ref|YP_007866659.1|	-	1.4	9.0	5.0	0.79	9.8	1.4	2.0	1	1	2	3	3	3	0	Fibrinogen	alpha/beta	chain	family
SapB_1	PF05184.10	gi|479326602|ref|YP_007866659.1|	-	7.9	6.4	7.0	8.6	6.3	0.0	3.6	4	0	0	4	4	4	0	Saposin-like	type	B,	region	1
HTH_45	PF14947.1	gi|479326603|ref|YP_007866660.1|	-	2e-23	81.9	1.3	2.7e-23	81.5	0.9	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix
rRNA_processing	PF08524.6	gi|479326603|ref|YP_007866660.1|	-	0.00011	21.9	0.4	0.00013	21.7	0.2	1.1	1	0	0	1	1	1	1	rRNA	processing
DUF4364	PF14277.1	gi|479326603|ref|YP_007866660.1|	-	0.00018	21.1	1.8	0.00058	19.5	1.3	1.7	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4364)
HTH_24	PF13412.1	gi|479326603|ref|YP_007866660.1|	-	0.00065	19.0	1.3	0.0019	17.5	0.9	1.9	1	1	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
Rrf2	PF02082.15	gi|479326603|ref|YP_007866660.1|	-	0.006	16.6	0.0	0.0092	16.0	0.0	1.4	1	0	0	1	1	1	1	Transcriptional	regulator
DUF2250	PF10007.4	gi|479326603|ref|YP_007866660.1|	-	0.017	15.0	0.2	0.054	13.4	0.1	1.9	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HxlR	PF01638.12	gi|479326603|ref|YP_007866660.1|	-	0.017	14.7	0.1	0.039	13.5	0.1	1.6	1	1	0	1	1	1	0	HxlR-like	helix-turn-helix
Mrr_N	PF14338.1	gi|479326603|ref|YP_007866660.1|	-	0.024	14.7	0.3	0.049	13.7	0.0	1.8	2	1	0	2	2	2	0	Mrr	N-terminal	domain
HemN_C	PF06969.11	gi|479326603|ref|YP_007866660.1|	-	0.066	13.2	0.0	0.1	12.6	0.0	1.3	1	0	0	1	1	1	0	HemN	C-terminal	domain
Ribosomal_S25	PF03297.10	gi|479326603|ref|YP_007866660.1|	-	0.073	13.1	0.1	0.13	12.3	0.0	1.5	1	0	0	1	1	1	0	S25	ribosomal	protein
TrmB	PF01978.14	gi|479326603|ref|YP_007866660.1|	-	0.091	12.4	0.1	0.16	11.6	0.0	1.4	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_27	PF13463.1	gi|479326603|ref|YP_007866660.1|	-	0.097	13.0	0.1	0.29	11.4	0.0	1.8	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
HTH_5	PF01022.15	gi|479326603|ref|YP_007866660.1|	-	0.14	11.8	0.4	0.53	9.9	0.0	2.0	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
NicO	PF03824.11	gi|479326604|ref|YP_007866661.1|	-	0.0087	15.4	3.6	0.0087	15.4	2.5	2.3	1	1	0	2	2	2	1	High-affinity	nickel-transport	protein
Got1	PF04178.7	gi|479326604|ref|YP_007866661.1|	-	0.031	14.3	0.9	0.031	14.3	0.7	2.3	1	1	0	2	2	2	0	Got1/Sft2-like	family
Glycos_transf_1	PF00534.15	gi|479326605|ref|YP_007866662.1|	-	5.3e-13	48.7	0.1	1.2e-12	47.5	0.1	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|479326605|ref|YP_007866662.1|	-	2.9e-12	46.9	0.1	3.7e-10	40.0	0.0	2.3	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|479326605|ref|YP_007866662.1|	-	6.7e-05	22.6	0.1	0.0078	15.9	0.1	2.5	1	1	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_1_2	PF13524.1	gi|479326605|ref|YP_007866662.1|	-	0.0074	16.5	0.0	0.018	15.3	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.1	gi|479326605|ref|YP_007866662.1|	-	0.069	13.2	0.0	0.1	12.7	0.0	1.3	1	0	0	1	1	1	0	Glycosyl	transferase	4-like	domain
HTH_WhiA	PF02650.9	gi|479326607|ref|YP_007866664.1|	-	0.01	16.2	0.0	0.011	16.0	0.0	1.1	1	0	0	1	1	1	0	WhiA	C-terminal	HTH	domain
HTH_24	PF13412.1	gi|479326607|ref|YP_007866664.1|	-	0.017	14.4	0.1	0.03	13.7	0.0	1.4	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
HTH_Tnp_Tc3_2	PF01498.13	gi|479326607|ref|YP_007866664.1|	-	0.071	13.1	0.0	0.11	12.6	0.0	1.3	1	0	0	1	1	1	0	Transposase
Epimerase	PF01370.16	gi|479326608|ref|YP_007866665.1|	-	3.9e-13	49.3	0.0	9e-13	48.1	0.0	1.6	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|479326608|ref|YP_007866665.1|	-	1e-08	34.4	0.0	4.5e-08	32.3	0.0	1.8	1	1	0	1	1	1	1	RmlD	substrate	binding	domain
NAD_binding_10	PF13460.1	gi|479326608|ref|YP_007866665.1|	-	2.6e-08	34.0	0.0	3.4e-08	33.7	0.0	1.2	1	0	0	1	1	1	1	NADH(P)-binding
NmrA	PF05368.8	gi|479326608|ref|YP_007866665.1|	-	1.6e-07	30.8	0.0	2.5e-07	30.1	0.0	1.3	1	0	0	1	1	1	1	NmrA-like	family
3Beta_HSD	PF01073.14	gi|479326608|ref|YP_007866665.1|	-	7.5e-06	24.8	0.2	8.1e-05	21.4	0.1	2.3	1	1	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
NAD_binding_2	PF03446.10	gi|479326608|ref|YP_007866665.1|	-	9.9e-05	22.2	0.0	0.00018	21.3	0.0	1.4	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_binding_4	PF07993.7	gi|479326608|ref|YP_007866665.1|	-	0.0018	17.2	0.0	0.39	9.6	0.0	2.2	2	0	0	2	2	2	2	Male	sterility	protein
AlaDh_PNT_C	PF01262.16	gi|479326608|ref|YP_007866665.1|	-	0.036	13.6	0.0	0.054	13.0	0.0	1.3	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
Glyco_transf_4	PF13439.1	gi|479326608|ref|YP_007866665.1|	-	0.059	13.0	0.0	0.12	12.0	0.0	1.4	1	0	0	1	1	1	0	Glycosyltransferase	Family	4
2-Hacid_dh_C	PF02826.14	gi|479326608|ref|YP_007866665.1|	-	0.081	12.0	0.0	0.15	11.1	0.0	1.3	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Cache_2	PF08269.6	gi|479326608|ref|YP_007866665.1|	-	0.12	12.4	0.1	0.28	11.1	0.0	1.6	1	0	0	1	1	1	0	Cache	domain
Esterase	PF00756.15	gi|479326610|ref|YP_007866667.1|	-	5.1e-16	58.8	0.0	1.5e-15	57.3	0.0	1.6	1	1	0	1	1	1	1	Putative	esterase
Peptidase_S9	PF00326.16	gi|479326610|ref|YP_007866667.1|	-	0.00055	19.2	0.0	0.0019	17.4	0.0	1.7	2	0	0	2	2	2	1	Prolyl	oligopeptidase	family
Abhydrolase_5	PF12695.2	gi|479326610|ref|YP_007866667.1|	-	0.0018	18.0	0.0	0.0021	17.7	0.0	1.3	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
BAAT_C	PF08840.6	gi|479326610|ref|YP_007866667.1|	-	0.0024	17.6	0.0	0.0038	16.9	0.0	1.3	1	0	0	1	1	1	1	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
Chlorophyllase	PF07224.6	gi|479326610|ref|YP_007866667.1|	-	0.004	16.0	0.0	0.0069	15.2	0.0	1.4	1	1	0	1	1	1	1	Chlorophyllase
Chlorophyllase2	PF12740.2	gi|479326610|ref|YP_007866667.1|	-	0.0075	15.1	0.0	0.016	14.0	0.0	1.6	1	1	0	1	1	1	1	Chlorophyllase	enzyme
DUF915	PF06028.6	gi|479326610|ref|YP_007866667.1|	-	0.049	12.7	0.1	0.1	11.6	0.1	1.5	1	0	0	1	1	1	0	Alpha/beta	hydrolase	of	unknown	function	(DUF915)
Autoind_bind	PF03472.10	gi|479326610|ref|YP_007866667.1|	-	0.073	12.3	0.0	0.14	11.4	0.0	1.4	1	0	0	1	1	1	0	Autoinducer	binding	domain
Abhydrolase_1	PF00561.15	gi|479326610|ref|YP_007866667.1|	-	0.15	11.5	0.0	0.22	11.0	0.0	1.3	1	0	0	1	1	1	0	alpha/beta	hydrolase	fold
DUF309	PF03745.9	gi|479326610|ref|YP_007866667.1|	-	0.84	9.1	3.2	9.5	5.7	0.2	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF309)
IF-2B	PF01008.12	gi|479326611|ref|YP_007866668.1|	-	5.7e-74	248.6	0.1	6.8e-74	248.3	0.1	1.0	1	0	0	1	1	1	1	Initiation	factor	2	subunit	family
ProRS-C_2	PF09181.5	gi|479326611|ref|YP_007866668.1|	-	3.1	7.7	6.3	25	4.9	0.1	3.9	4	0	0	4	4	4	0	Prolyl-tRNA	synthetase,	C-terminal
DUF95	PF01944.12	gi|479326612|ref|YP_007866669.1|	-	6.6e-16	58.4	12.9	1.4e-15	57.3	8.9	1.5	1	0	0	1	1	1	1	Integral	membrane	protein	DUF95
MIT	PF04212.13	gi|479326612|ref|YP_007866669.1|	-	0.01	15.7	0.0	0.02	14.7	0.0	1.4	1	0	0	1	1	1	0	MIT	(microtubule	interacting	and	transport)	domain
Gemini_mov	PF01708.11	gi|479326614|ref|YP_007866671.1|	-	0.21	11.1	1.9	0.34	10.4	1.3	1.3	1	0	0	1	1	1	0	Geminivirus	putative	movement	protein
LAB_N	PF07578.6	gi|479326614|ref|YP_007866671.1|	-	0.33	10.8	6.5	0.54	10.2	2.0	2.1	1	1	1	2	2	2	0	Lipid	A	Biosynthesis	N-terminal	domain
DUF1673	PF07895.6	gi|479326614|ref|YP_007866671.1|	-	0.97	8.9	5.8	0.84	9.1	3.4	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1673)
Cellulose_synt	PF03552.9	gi|479326614|ref|YP_007866671.1|	-	2.4	6.3	5.6	2.2	6.4	3.9	1.1	1	0	0	1	1	1	0	Cellulose	synthase
DUF1404	PF07185.6	gi|479326615|ref|YP_007866672.1|	-	1.1e-56	191.0	19.2	1.4e-56	190.7	13.3	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1404)
Caa3_CtaG	PF09678.5	gi|479326615|ref|YP_007866672.1|	-	0.0012	17.8	4.1	0.0012	17.8	2.8	2.2	1	1	1	2	2	2	2	Cytochrome	c	oxidase	caa3	assembly	factor	(Caa3_CtaG)
DUF1230	PF06799.6	gi|479326615|ref|YP_007866672.1|	-	0.18	11.6	6.7	0.089	12.6	0.5	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1230)
MscL	PF01741.13	gi|479326615|ref|YP_007866672.1|	-	1.1	9.4	7.2	8.9	6.4	0.0	3.1	3	1	0	3	3	3	0	Large-conductance	mechanosensitive	channel,	MscL
FUSC_2	PF13515.1	gi|479326615|ref|YP_007866672.1|	-	8.4	6.3	16.5	1.1	9.2	2.3	2.5	2	1	0	2	2	2	0	Fusaric	acid	resistance	protein-like
COX1	PF00115.15	gi|479326616|ref|YP_007866673.1|	-	3.9e-132	441.0	59.7	3.9e-132	441.0	41.4	2.5	3	0	0	3	3	3	1	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
COX3	PF00510.13	gi|479326616|ref|YP_007866673.1|	-	4.6e-19	68.8	18.0	4.6e-19	68.8	12.5	2.6	2	0	0	2	2	2	1	Cytochrome	c	oxidase	subunit	III
SoxE	PF06525.6	gi|479326617|ref|YP_007866674.1|	-	2e-80	268.6	14.8	2.3e-80	268.5	10.3	1.0	1	0	0	1	1	1	1	Sulfocyanin	(SoxE)
Copper-bind	PF00127.15	gi|479326617|ref|YP_007866674.1|	-	0.0024	18.0	0.0	0.0042	17.2	0.0	1.4	1	0	0	1	1	1	1	Copper	binding	proteins,	plastocyanin/azurin	family
Cu-oxidase_2	PF07731.9	gi|479326617|ref|YP_007866674.1|	-	0.01	15.3	0.4	0.026	14.0	0.1	1.8	2	0	0	2	2	2	0	Multicopper	oxidase
DUF2371	PF10177.4	gi|479326617|ref|YP_007866674.1|	-	0.012	15.4	0.1	0.026	14.4	0.1	1.5	1	0	0	1	1	1	0	Uncharacterised	conserved	protein	(DUF2371)
Rieske	PF00355.21	gi|479326618|ref|YP_007866675.1|	-	4.5e-16	58.2	0.0	7.9e-16	57.4	0.0	1.3	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
TAT_signal	PF10518.4	gi|479326618|ref|YP_007866675.1|	-	0.13	12.3	0.2	0.33	11.0	0.1	1.7	1	0	0	1	1	1	0	TAT	(twin-arginine	translocation)	pathway	signal	sequence
Cytochrom_B_N_2	PF13631.1	gi|479326619|ref|YP_007866676.1|	-	6e-32	110.7	8.0	6e-32	110.7	5.5	2.3	3	0	0	3	3	3	1	Cytochrome	b(N-terminal)/b6/petB
Cytochrom_B_N	PF00033.14	gi|479326619|ref|YP_007866676.1|	-	6.1e-07	28.9	9.9	6.1e-07	28.9	6.9	3.0	2	1	0	2	2	2	1	Cytochrome	b(N-terminal)/b6/petB
Ni_hydr_CYTB	PF01292.15	gi|479326619|ref|YP_007866676.1|	-	0.0026	17.1	14.4	0.075	12.4	0.3	3.1	2	1	0	2	2	2	2	Prokaryotic	cytochrome	b561
Cytochrom_B_C	PF00032.12	gi|479326619|ref|YP_007866676.1|	-	0.0045	17.1	3.8	0.0045	17.1	2.6	4.0	5	2	1	6	6	6	1	Cytochrome	b(C-terminal)/b6/petD
COX2	PF00116.15	gi|479326620|ref|YP_007866677.1|	-	1.6e-20	73.1	0.2	3.1e-19	68.9	0.0	2.1	1	1	1	2	2	2	1	Cytochrome	C	oxidase	subunit	II,	periplasmic	domain
Cupredoxin_1	PF13473.1	gi|479326620|ref|YP_007866677.1|	-	1.3e-05	25.0	0.0	1.7e-05	24.6	0.0	1.3	1	0	0	1	1	1	1	Cupredoxin-like	domain
Yip1	PF04893.12	gi|479326621|ref|YP_007866678.1|	-	0.26	10.7	17.8	0.35	10.3	12.3	1.1	1	0	0	1	1	1	0	Yip1	domain
PalH	PF08733.5	gi|479326621|ref|YP_007866678.1|	-	0.5	9.1	14.5	0.63	8.8	10.0	1.2	1	0	0	1	1	1	0	PalH/RIM21
CHD5	PF04420.9	gi|479326621|ref|YP_007866678.1|	-	1.2	8.8	4.8	0.39	10.3	1.5	1.6	2	0	0	2	2	2	0	CHD5-like	protein
GWT1	PF06423.7	gi|479326621|ref|YP_007866678.1|	-	3.2	7.8	10.8	8.8	6.4	0.1	2.4	1	1	1	2	2	2	0	GWT1
DUF4179	PF13786.1	gi|479326622|ref|YP_007866679.1|	-	0.13	12.4	5.6	0.87	9.8	0.7	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4179)
Epiglycanin_C	PF14654.1	gi|479326622|ref|YP_007866679.1|	-	7.3	6.6	7.9	5.4	7.0	0.2	2.3	1	1	0	2	2	2	0	Mucin,	catalytic,	TM	and	cytoplasmic	tail	region
Na_H_Exchanger	PF00999.16	gi|479326624|ref|YP_007866681.1|	-	3.3e-28	98.3	54.2	3.3e-28	98.3	37.6	2.2	3	0	0	3	3	3	1	Sodium/hydrogen	exchanger	family
Lamp	PF01299.12	gi|479326624|ref|YP_007866681.1|	-	0.16	11.0	0.2	0.25	10.4	0.2	1.2	1	0	0	1	1	1	0	Lysosome-associated	membrane	glycoprotein	(Lamp)
Med30	PF11315.3	gi|479326625|ref|YP_007866682.1|	-	0.023	14.8	0.8	0.024	14.7	0.5	1.1	1	0	0	1	1	1	0	Mediator	complex	subunit	30
IRF-2BP1_2	PF11261.3	gi|479326625|ref|YP_007866682.1|	-	0.056	12.9	0.4	0.069	12.6	0.3	1.3	1	0	0	1	1	1	0	Interferon	regulatory	factor	2-binding	protein	zinc	finger
Thioredoxin_3	PF13192.1	gi|479326625|ref|YP_007866682.1|	-	0.54	10.1	2.7	1.7	8.5	1.9	1.8	1	1	0	1	1	1	0	Thioredoxin	domain
DUF929	PF06053.6	gi|479326626|ref|YP_007866683.1|	-	2.1e-76	256.3	14.4	2.3e-76	256.1	10.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF929)
Transketolase_C	PF02780.15	gi|479326626|ref|YP_007866683.1|	-	0.0022	17.8	0.0	0.67	9.8	0.0	2.3	2	0	0	2	2	2	2	Transketolase,	C-terminal	domain
PsbY	PF06298.6	gi|479326626|ref|YP_007866683.1|	-	0.19	11.3	1.8	0.19	11.2	0.1	1.9	2	0	0	2	2	2	0	Photosystem	II	protein	Y	(PsbY)
Methyltransf_11	PF08241.7	gi|479326627|ref|YP_007866684.1|	-	1.3e-10	41.6	0.0	1.9e-10	41.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|479326627|ref|YP_007866684.1|	-	6.7e-09	35.4	0.2	9.6e-09	34.9	0.1	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|479326627|ref|YP_007866684.1|	-	1e-06	29.2	0.1	2.3e-06	28.1	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|479326627|ref|YP_007866684.1|	-	1.7e-05	24.0	0.6	3.3e-05	23.1	0.4	1.3	1	1	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
MTS	PF05175.9	gi|479326627|ref|YP_007866684.1|	-	8.2e-05	22.0	0.0	0.00016	21.1	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_12	PF08242.7	gi|479326627|ref|YP_007866684.1|	-	0.00017	21.9	0.1	0.00031	21.1	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|479326627|ref|YP_007866684.1|	-	0.00026	20.7	0.0	0.00037	20.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|479326627|ref|YP_007866684.1|	-	0.0037	17.2	0.0	0.017	15.1	0.0	2.0	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|479326627|ref|YP_007866684.1|	-	0.0071	16.6	0.0	0.013	15.8	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
TPMT	PF05724.6	gi|479326627|ref|YP_007866684.1|	-	0.0082	15.6	0.0	0.0096	15.3	0.0	1.1	1	0	0	1	1	1	1	Thiopurine	S-methyltransferase	(TPMT)
CMAS	PF02353.15	gi|479326627|ref|YP_007866684.1|	-	0.02	13.9	0.1	0.03	13.3	0.0	1.2	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
PrmA	PF06325.8	gi|479326627|ref|YP_007866684.1|	-	0.049	12.7	0.0	0.063	12.3	0.0	1.1	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
PCMT	PF01135.14	gi|479326627|ref|YP_007866684.1|	-	0.058	12.9	0.0	0.077	12.5	0.0	1.4	1	1	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
MetW	PF07021.7	gi|479326627|ref|YP_007866684.1|	-	0.081	12.2	0.2	0.21	10.9	0.1	1.8	1	1	1	2	2	2	0	Methionine	biosynthesis	protein	MetW
FmrO	PF07091.6	gi|479326627|ref|YP_007866684.1|	-	0.097	11.6	0.0	0.17	10.8	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	RNA	methyltransferase	(FmrO)
SBP_bac_5	PF00496.17	gi|479326628|ref|YP_007866685.1|	-	9.6e-63	212.2	0.5	3.4e-62	210.4	0.4	1.7	1	1	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
DUF4307	PF14155.1	gi|479326628|ref|YP_007866685.1|	-	0.0039	16.9	0.1	0.0079	15.9	0.1	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4307)
Shisa	PF13908.1	gi|479326628|ref|YP_007866685.1|	-	0.06	13.5	0.5	0.11	12.6	0.4	1.4	1	0	0	1	1	1	0	Wnt	and	FGF	inhibitory	regulator
SP_C-Propep	PF08999.5	gi|479326628|ref|YP_007866685.1|	-	0.1	12.1	0.3	0.27	10.7	0.2	1.7	1	0	0	1	1	1	0	Surfactant	protein	C,	N	terminal	propeptide
DUF1510	PF07423.6	gi|479326628|ref|YP_007866685.1|	-	0.19	11.0	0.1	0.36	10.1	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1510)
BPD_transp_1	PF00528.17	gi|479326629|ref|YP_007866686.1|	-	7.5e-42	142.9	12.6	7.5e-42	142.9	8.7	1.8	2	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.17	gi|479326630|ref|YP_007866687.1|	-	1.7e-28	99.4	11.4	1.7e-28	99.4	7.9	2.1	2	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.2	gi|479326630|ref|YP_007866687.1|	-	0.018	14.3	2.4	0.018	14.3	1.6	2.3	2	0	0	2	2	2	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
PIG-P	PF08510.7	gi|479326630|ref|YP_007866687.1|	-	1.2	8.7	4.6	0.22	11.1	0.3	1.9	2	0	0	2	2	2	0	PIG-P
ABC_tran	PF00005.22	gi|479326631|ref|YP_007866688.1|	-	1.5e-29	103.0	0.0	2.6e-29	102.2	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|479326631|ref|YP_007866688.1|	-	8e-16	58.1	0.0	1.6e-15	57.2	0.0	1.5	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|479326631|ref|YP_007866688.1|	-	8.9e-12	45.5	4.9	3.6e-11	43.5	3.4	1.9	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|479326631|ref|YP_007866688.1|	-	1.3e-06	27.8	2.1	3e-06	26.6	1.4	1.6	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|479326631|ref|YP_007866688.1|	-	0.00069	19.1	0.0	0.0014	18.1	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|479326631|ref|YP_007866688.1|	-	0.0058	16.9	0.2	0.0083	16.4	0.2	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|479326631|ref|YP_007866688.1|	-	0.0079	16.3	0.8	0.11	12.6	0.5	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|479326631|ref|YP_007866688.1|	-	0.015	14.7	0.4	0.1	12.0	0.1	1.8	1	1	0	2	2	2	0	AAA-like	domain
MobB	PF03205.9	gi|479326631|ref|YP_007866688.1|	-	0.019	14.6	0.0	0.039	13.6	0.0	1.7	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_15	PF13175.1	gi|479326631|ref|YP_007866688.1|	-	0.046	12.7	8.4	0.67	8.9	0.2	2.2	1	1	0	2	2	2	0	AAA	ATPase	domain
MMR_HSR1	PF01926.18	gi|479326631|ref|YP_007866688.1|	-	0.056	13.3	0.7	0.11	12.5	0.1	1.7	2	1	0	2	2	2	0	50S	ribosome-binding	GTPase
DUF258	PF03193.11	gi|479326631|ref|YP_007866688.1|	-	0.11	11.6	0.1	0.2	10.7	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
NACHT	PF05729.7	gi|479326631|ref|YP_007866688.1|	-	0.12	12.0	0.1	0.26	10.9	0.1	1.6	1	0	0	1	1	1	0	NACHT	domain
NB-ARC	PF00931.17	gi|479326631|ref|YP_007866688.1|	-	0.12	11.1	0.4	0.22	10.3	0.1	1.5	2	0	0	2	2	2	0	NB-ARC	domain
FtsK_SpoIIIE	PF01580.13	gi|479326631|ref|YP_007866688.1|	-	0.17	11.3	0.1	0.32	10.4	0.1	1.4	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
DUF87	PF01935.12	gi|479326631|ref|YP_007866688.1|	-	0.17	11.6	1.9	0.29	10.9	0.1	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF87
AAA_18	PF13238.1	gi|479326631|ref|YP_007866688.1|	-	0.27	11.5	2.1	0.32	11.3	0.6	1.9	2	1	0	2	2	2	0	AAA	domain
ABC_tran	PF00005.22	gi|479326632|ref|YP_007866689.1|	-	3.9e-33	114.6	0.0	6.8e-33	113.8	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|479326632|ref|YP_007866689.1|	-	5.5e-16	58.6	0.0	1.1e-15	57.6	0.0	1.5	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|479326632|ref|YP_007866689.1|	-	1.1e-11	45.2	5.0	9.2e-10	38.9	0.7	2.3	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|479326632|ref|YP_007866689.1|	-	0.00013	21.3	0.6	0.0091	15.2	0.4	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_22	PF13401.1	gi|479326632|ref|YP_007866689.1|	-	0.00049	20.2	3.0	0.0078	16.3	2.1	2.3	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|479326632|ref|YP_007866689.1|	-	0.0029	17.1	0.3	0.0055	16.2	0.2	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.1	gi|479326632|ref|YP_007866689.1|	-	0.0075	16.2	0.2	0.012	15.5	0.2	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
FtsK_SpoIIIE	PF01580.13	gi|479326632|ref|YP_007866689.1|	-	0.0083	15.6	0.0	0.013	14.9	0.0	1.3	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
ResIII	PF04851.10	gi|479326632|ref|YP_007866689.1|	-	0.014	15.2	0.1	0.087	12.6	0.0	2.0	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
KH_2	PF07650.12	gi|479326632|ref|YP_007866689.1|	-	0.03	13.8	1.5	0.099	12.2	1.0	1.9	1	0	0	1	1	1	0	KH	domain
SbcCD_C	PF13558.1	gi|479326632|ref|YP_007866689.1|	-	0.033	14.0	0.0	0.23	11.4	0.0	2.3	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_13	PF13166.1	gi|479326632|ref|YP_007866689.1|	-	0.039	12.4	1.0	0.13	10.7	0.1	1.9	2	0	0	2	2	2	0	AAA	domain
ATP-synt_ab	PF00006.20	gi|479326632|ref|YP_007866689.1|	-	0.039	13.4	0.0	0.043	13.3	0.0	1.3	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
GvpD	PF07088.6	gi|479326632|ref|YP_007866689.1|	-	0.045	12.0	0.0	0.067	11.5	0.0	1.2	1	0	0	1	1	1	0	GvpD	gas	vesicle	protein
AAA_25	PF13481.1	gi|479326632|ref|YP_007866689.1|	-	0.046	13.1	0.0	0.11	11.8	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
DUF258	PF03193.11	gi|479326632|ref|YP_007866689.1|	-	0.047	12.8	0.2	0.1	11.7	0.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
T2SE	PF00437.15	gi|479326632|ref|YP_007866689.1|	-	0.056	12.3	0.0	0.075	11.9	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
IstB_IS21	PF01695.12	gi|479326632|ref|YP_007866689.1|	-	0.074	12.4	0.0	0.15	11.5	0.0	1.4	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
Arch_ATPase	PF01637.13	gi|479326632|ref|YP_007866689.1|	-	0.075	12.7	0.0	0.13	11.9	0.0	1.4	1	0	0	1	1	1	0	Archaeal	ATPase
AAA_18	PF13238.1	gi|479326632|ref|YP_007866689.1|	-	0.079	13.2	0.1	0.26	11.6	0.0	1.9	2	1	0	2	2	2	0	AAA	domain
TIP49	PF06068.8	gi|479326632|ref|YP_007866689.1|	-	0.081	11.6	0.7	0.14	10.8	0.1	1.6	2	0	0	2	2	2	0	TIP49	C-terminus
AAA	PF00004.24	gi|479326632|ref|YP_007866689.1|	-	0.085	13.0	0.1	0.61	10.2	0.0	2.1	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
NACHT	PF05729.7	gi|479326632|ref|YP_007866689.1|	-	0.11	12.1	0.1	0.22	11.1	0.1	1.5	1	0	0	1	1	1	0	NACHT	domain
AAA_15	PF13175.1	gi|479326632|ref|YP_007866689.1|	-	0.16	10.9	9.4	0.082	11.9	0.7	2.5	3	0	0	3	3	3	0	AAA	ATPase	domain
MFS_1	PF07690.11	gi|479326633|ref|YP_007866690.1|	-	3.5e-10	39.1	41.1	2.1e-06	26.7	5.8	3.1	1	1	1	3	3	3	2	Major	Facilitator	Superfamily
dUTPase	PF00692.14	gi|479326634|ref|YP_007866691.1|	-	2.7e-06	26.8	0.0	5.3e-06	25.9	0.0	1.5	2	0	0	2	2	2	1	dUTPase
7TMR-DISM_7TM	PF07695.6	gi|479326636|ref|YP_007866693.1|	-	0.1	12.2	2.9	0.12	12.0	2.0	1.0	1	0	0	1	1	1	0	7TM	diverse	intracellular	signalling
Radical_SAM	PF04055.16	gi|479326637|ref|YP_007866694.1|	-	2.5e-05	24.5	0.2	9.1e-05	22.6	0.1	1.8	1	1	1	2	2	2	1	Radical	SAM	superfamily
SPASM	PF13186.1	gi|479326637|ref|YP_007866694.1|	-	0.048	13.9	0.0	0.14	12.4	0.0	1.8	1	0	0	1	1	1	0	Iron-sulfur	cluster-binding	domain
DKNYY	PF13644.1	gi|479326638|ref|YP_007866695.1|	-	1.3	9.2	14.2	2.7	8.2	9.8	1.4	1	1	0	1	1	1	0	DKNYY	family
PIN	PF01850.16	gi|479326640|ref|YP_007866697.1|	-	6.7e-08	32.8	0.0	8e-08	32.6	0.0	1.1	1	0	0	1	1	1	1	PIN	domain
UPF0278	PF08745.6	gi|479326640|ref|YP_007866697.1|	-	0.00033	19.9	0.1	0.00046	19.4	0.1	1.3	1	1	0	1	1	1	1	UPF0278	family
DUF366	PF04017.7	gi|479326640|ref|YP_007866697.1|	-	0.022	14.0	0.1	0.026	13.8	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF366)
DUF3680	PF12441.3	gi|479326640|ref|YP_007866697.1|	-	0.055	13.3	0.0	0.12	12.2	0.0	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3680)
Antitoxin-MazE	PF04014.13	gi|479326641|ref|YP_007866698.1|	-	4.5e-11	42.2	4.4	6.7e-11	41.6	3.1	1.3	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
eIF-1a	PF01176.14	gi|479326641|ref|YP_007866698.1|	-	0.056	12.8	1.5	0.083	12.3	1.0	1.5	1	1	0	1	1	1	0	Translation	initiation	factor	1A	/	IF-1
DUF104	PF01954.11	gi|479326641|ref|YP_007866698.1|	-	0.12	12.3	3.7	0.071	13.1	0.7	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	DUF104
DUF3782	PF12644.2	gi|479326642|ref|YP_007866699.1|	-	1.2e-33	114.6	13.3	1.1e-25	89.1	0.4	3.5	1	1	2	3	3	3	3	Protein	of	unknown	function	(DUF3782)
DUF1626	PF07788.6	gi|479326642|ref|YP_007866699.1|	-	1.4e-32	111.3	1.6	1.4e-32	111.3	1.1	2.2	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1626)
DUF2730	PF10805.3	gi|479326642|ref|YP_007866699.1|	-	0.0097	15.6	7.3	0.48	10.1	1.2	2.7	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF2730)
Acetyltransf_4	PF13420.1	gi|479326642|ref|YP_007866699.1|	-	0.017	15.0	0.5	0.041	13.8	0.4	1.7	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
Atg14	PF10186.4	gi|479326642|ref|YP_007866699.1|	-	0.23	10.3	7.0	0.33	9.8	4.3	1.6	2	0	0	2	2	2	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
DUF2674	PF10879.3	gi|479326642|ref|YP_007866699.1|	-	0.31	10.7	3.9	2.5	7.9	0.7	2.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2674)
DUF3349	PF11829.3	gi|479326642|ref|YP_007866699.1|	-	0.34	11.3	5.4	0.41	11.1	0.8	2.7	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3349)
DUF1664	PF07889.7	gi|479326642|ref|YP_007866699.1|	-	0.64	9.8	7.7	3.4	7.4	3.7	2.2	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
ADIP	PF11559.3	gi|479326642|ref|YP_007866699.1|	-	1.5	8.7	10.1	5.8	6.8	6.4	2.0	1	1	0	1	1	1	0	Afadin-	and	alpha	-actinin-Binding
Rnk_N	PF14760.1	gi|479326642|ref|YP_007866699.1|	-	1.5	8.9	4.5	11	6.2	0.0	3.2	3	1	1	4	4	4	0	Rnk	N-terminus
SF3a60_bindingd	PF12108.3	gi|479326642|ref|YP_007866699.1|	-	4	7.0	6.7	0.53	9.8	1.2	2.2	2	0	0	2	2	2	0	Splicing	factor	SF3a60	binding	domain
Ald_Xan_dh_C2	PF02738.13	gi|479326644|ref|YP_007866701.1|	-	1.3e-102	343.9	0.0	9e-80	268.5	0.0	2.1	1	1	1	2	2	2	2	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|479326644|ref|YP_007866701.1|	-	5.8e-13	48.9	0.0	1.6e-12	47.4	0.0	1.8	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
FAA_hydrolase	PF01557.13	gi|479326645|ref|YP_007866702.1|	-	2.6e-37	128.3	0.0	3.3e-37	128.0	0.0	1.0	1	0	0	1	1	1	1	Fumarylacetoacetate	(FAA)	hydrolase	family
Rieske	PF00355.21	gi|479326646|ref|YP_007866703.1|	-	0.0013	18.2	0.0	0.0013	18.2	0.0	1.1	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Hydantoinase_A	PF01968.13	gi|479326647|ref|YP_007866704.1|	-	1.2e-88	297.0	0.2	9.3e-87	290.7	0.0	2.2	2	0	0	2	2	2	2	Hydantoinase/oxoprolinase
Hydant_A_N	PF05378.8	gi|479326647|ref|YP_007866704.1|	-	4.8e-50	169.4	0.2	9.3e-50	168.5	0.1	1.5	1	0	0	1	1	1	1	Hydantoinase/oxoprolinase	N-terminal	region
EutA	PF06277.6	gi|479326647|ref|YP_007866704.1|	-	0.12	10.9	1.0	0.19	10.3	0.1	1.7	2	0	0	2	2	2	0	Ethanolamine	utilisation	protein	EutA
Hydantoinase_B	PF02538.9	gi|479326648|ref|YP_007866705.1|	-	2.8e-165	550.5	5.5	3.3e-165	550.2	3.8	1.0	1	0	0	1	1	1	1	Hydantoinase	B/oxoprolinase
TrkA_C	PF02080.16	gi|479326648|ref|YP_007866705.1|	-	0.074	12.6	0.0	0.2	11.2	0.0	1.7	1	0	0	1	1	1	0	TrkA-C	domain
ATG22	PF11700.3	gi|479326648|ref|YP_007866705.1|	-	0.16	10.3	0.0	0.22	9.9	0.0	1.1	1	0	0	1	1	1	0	Vacuole	effluxer	Atg22	like
SLAC1	PF03595.12	gi|479326649|ref|YP_007866706.1|	-	4.6e-10	38.6	50.9	2.1e-08	33.2	35.3	2.2	1	1	0	1	1	1	1	Voltage-dependent	anion	channel
TauE	PF01925.14	gi|479326651|ref|YP_007866708.1|	-	8.2e-21	74.5	10.3	8.2e-21	74.5	7.1	1.4	1	1	0	1	1	1	1	Sulfite	exporter	TauE/SafE
PARP_reg	PF02877.9	gi|479326652|ref|YP_007866709.1|	-	0.038	13.6	0.4	0.047	13.3	0.3	1.1	1	0	0	1	1	1	0	Poly(ADP-ribose)	polymerase,	regulatory	domain
RNA_pol_L	PF01193.19	gi|479326652|ref|YP_007866709.1|	-	0.058	12.5	0.0	0.058	12.5	0.0	1.3	1	0	0	1	1	1	0	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
ATP-sulfurylase	PF01747.12	gi|479326653|ref|YP_007866710.1|	-	1.4e-79	266.3	0.0	1.8e-79	266.0	0.0	1.1	1	0	0	1	1	1	1	ATP-sulfurylase
PUA_2	PF14306.1	gi|479326653|ref|YP_007866710.1|	-	1.6e-40	138.1	0.0	2.7e-40	137.3	0.0	1.4	1	0	0	1	1	1	1	PUA-like	domain
TF_Zn_Ribbon	PF08271.7	gi|479326653|ref|YP_007866710.1|	-	0.00095	18.4	1.2	0.0019	17.4	0.4	1.8	2	0	0	2	2	2	1	TFIIB	zinc-binding
PAPS_reduct	PF01507.14	gi|479326654|ref|YP_007866711.1|	-	1.3e-48	165.1	0.0	1.5e-48	164.8	0.0	1.1	1	0	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
Pyrophosphatase	PF00719.14	gi|479326654|ref|YP_007866711.1|	-	0.00041	19.8	0.1	0.00067	19.1	0.0	1.3	1	0	0	1	1	1	1	Inorganic	pyrophosphatase
NIR_SIR	PF01077.17	gi|479326655|ref|YP_007866712.1|	-	3.4e-40	136.9	0.0	1.2e-36	125.4	0.0	2.6	2	0	0	2	2	2	2	Nitrite	and	sulphite	reductase	4Fe-4S	domain
NIR_SIR_ferr	PF03460.12	gi|479326655|ref|YP_007866712.1|	-	1.1e-21	76.2	0.1	1.2e-09	37.6	0.0	3.8	3	1	0	3	3	3	2	Nitrite/Sulfite	reductase	ferredoxin-like	half	domain
TP_methylase	PF00590.15	gi|479326656|ref|YP_007866713.1|	-	1.2e-30	106.8	0.0	1.4e-30	106.5	0.0	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
Rhodanese	PF00581.15	gi|479326657|ref|YP_007866714.1|	-	5.1e-43	146.0	0.1	2.2e-21	76.3	0.0	2.2	2	0	0	2	2	2	2	Rhodanese-like	domain
Urm1	PF09138.6	gi|479326658|ref|YP_007866715.1|	-	0.096	12.8	0.3	0.12	12.5	0.2	1.4	1	1	0	1	1	1	0	Urm1	(Ubiquitin	related	modifier)
RSD-2	PF07547.8	gi|479326658|ref|YP_007866715.1|	-	0.13	12.4	0.2	0.18	11.9	0.1	1.3	1	0	0	1	1	1	0	RSD-2	N-terminal	domain
Pyr_redox_2	PF07992.9	gi|479326659|ref|YP_007866716.1|	-	8.5e-16	58.4	0.1	1.3e-15	57.7	0.0	1.3	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|479326659|ref|YP_007866716.1|	-	5.2e-06	26.7	0.2	0.13	12.7	0.0	2.7	3	0	0	3	3	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_9	PF13454.1	gi|479326659|ref|YP_007866716.1|	-	2.2e-05	24.2	0.4	0.15	11.7	0.0	3.1	2	1	0	3	3	3	2	FAD-NAD(P)-binding
DAO	PF01266.19	gi|479326659|ref|YP_007866716.1|	-	2.5e-05	23.3	0.3	0.78	8.5	0.0	3.1	3	0	0	3	3	3	2	FAD	dependent	oxidoreductase
Pyr_redox_3	PF13738.1	gi|479326659|ref|YP_007866716.1|	-	0.00086	19.4	0.6	1.6	8.7	0.0	3.1	2	1	1	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.7	gi|479326659|ref|YP_007866716.1|	-	0.00089	18.2	0.4	0.091	11.6	0.1	2.4	2	1	1	3	3	3	1	Lycopene	cyclase	protein
Trp_halogenase	PF04820.9	gi|479326659|ref|YP_007866716.1|	-	0.0012	17.6	0.1	0.013	14.1	0.0	2.4	3	0	0	3	3	3	1	Tryptophan	halogenase
HI0933_like	PF03486.9	gi|479326659|ref|YP_007866716.1|	-	0.0018	16.8	0.1	4.1	5.7	0.0	3.0	3	0	0	3	3	3	1	HI0933-like	protein
GIDA	PF01134.17	gi|479326659|ref|YP_007866716.1|	-	0.0066	15.3	2.1	0.033	13.0	0.0	2.1	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
NAD_binding_7	PF13241.1	gi|479326659|ref|YP_007866716.1|	-	0.017	15.3	0.0	0.039	14.2	0.0	1.7	1	0	0	1	1	1	0	Putative	NAD(P)-binding
TrkA_N	PF02254.13	gi|479326659|ref|YP_007866716.1|	-	0.018	15.0	0.1	0.041	13.8	0.1	1.6	1	0	0	1	1	1	0	TrkA-N	domain
FAD_binding_3	PF01494.14	gi|479326659|ref|YP_007866716.1|	-	0.064	12.2	0.1	1.1	8.2	0.0	2.2	2	0	0	2	2	2	0	FAD	binding	domain
Rieske	PF00355.21	gi|479326660|ref|YP_007866717.1|	-	5.7e-13	48.2	0.0	6.5e-13	48.0	0.0	1.1	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Rieske_2	PF13806.1	gi|479326660|ref|YP_007866717.1|	-	5.4e-11	42.1	0.0	6.4e-11	41.9	0.0	1.1	1	0	0	1	1	1	1	Rieske-like	[2Fe-2S]	domain
Lactamase_B	PF00753.22	gi|479326661|ref|YP_007866718.1|	-	6.1e-23	81.4	2.0	8.4e-23	81.0	1.4	1.1	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|479326661|ref|YP_007866718.1|	-	1.1e-07	31.6	0.0	1.5e-07	31.1	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Asp_protease_2	PF13650.1	gi|479326661|ref|YP_007866718.1|	-	0.022	15.2	0.0	0.1	13.0	0.0	2.0	2	0	0	2	2	2	0	Aspartyl	protease
zf-ribbon_3	PF13248.1	gi|479326662|ref|YP_007866719.1|	-	0.00078	18.5	3.5	0.0013	17.8	2.4	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|479326662|ref|YP_007866719.1|	-	0.0044	16.8	0.6	0.0066	16.2	0.4	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_2	PF13240.1	gi|479326662|ref|YP_007866719.1|	-	0.03	13.7	3.9	0.047	13.1	2.7	1.3	1	0	0	1	1	1	0	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|479326662|ref|YP_007866719.1|	-	0.76	9.1	5.2	0.8	9.0	0.4	2.1	1	1	1	2	2	2	0	TFIIB	zinc-binding
zf-C4_ClpX	PF06689.8	gi|479326662|ref|YP_007866719.1|	-	1.6	8.3	8.3	2	7.9	0.8	2.3	1	1	1	2	2	2	0	ClpX	C4-type	zinc	finger
Aldo_ket_red	PF00248.16	gi|479326663|ref|YP_007866720.1|	-	2e-69	233.5	0.0	2.3e-69	233.3	0.0	1.0	1	0	0	1	1	1	1	Aldo/keto	reductase	family
CMD	PF02627.15	gi|479326664|ref|YP_007866721.1|	-	2.6e-20	72.0	0.0	3.4e-20	71.6	0.0	1.2	1	0	0	1	1	1	1	Carboxymuconolactone	decarboxylase	family
XdhC_C	PF13478.1	gi|479326667|ref|YP_007866724.1|	-	4.6e-23	82.0	0.0	6.2e-23	81.6	0.0	1.2	1	0	0	1	1	1	1	XdhC	Rossmann	domain
ADH_N	PF08240.7	gi|479326668|ref|YP_007866725.1|	-	1.5e-24	85.8	0.3	2.5e-23	81.9	0.2	2.2	1	1	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|479326668|ref|YP_007866725.1|	-	1.3e-14	53.8	0.0	1.1e-13	50.8	0.0	2.1	1	1	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|479326668|ref|YP_007866725.1|	-	3.7e-12	47.2	0.0	6.2e-12	46.5	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
NAD_binding_10	PF13460.1	gi|479326668|ref|YP_007866725.1|	-	0.065	13.2	0.0	0.18	11.7	0.0	1.7	1	1	0	1	1	1	0	NADH(P)-binding
Epimerase	PF01370.16	gi|479326668|ref|YP_007866725.1|	-	0.11	11.9	0.1	0.17	11.3	0.0	1.3	1	0	0	1	1	1	0	NAD	dependent	epimerase/dehydratase	family
Acyl-CoA_dh_1	PF00441.19	gi|479326669|ref|YP_007866726.1|	-	7.2e-42	143.0	4.4	1.2e-41	142.3	3.0	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.11	gi|479326669|ref|YP_007866726.1|	-	5.2e-32	110.7	0.1	1.6e-31	109.2	0.1	1.9	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_2	PF08028.6	gi|479326669|ref|YP_007866726.1|	-	1.6e-20	73.6	2.8	3e-20	72.8	1.9	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|479326669|ref|YP_007866726.1|	-	3.1e-20	71.4	0.1	6.4e-20	70.4	0.1	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
HpaB_N	PF11794.3	gi|479326669|ref|YP_007866726.1|	-	0.0023	17.3	0.0	0.0079	15.6	0.0	1.9	1	1	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
AMP-binding	PF00501.23	gi|479326670|ref|YP_007866727.1|	-	2.6e-84	283.0	0.0	3.1e-84	282.7	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|479326670|ref|YP_007866727.1|	-	6.9e-15	55.7	0.0	1.3e-14	54.8	0.0	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
Thiolase_N	PF00108.18	gi|479326671|ref|YP_007866728.1|	-	4e-15	55.5	0.3	3.4e-12	45.9	0.2	2.3	2	0	0	2	2	2	2	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.13	gi|479326671|ref|YP_007866728.1|	-	1.4e-07	30.9	0.2	1.3e-06	27.8	0.0	2.4	2	0	0	2	2	2	1	Thiolase,	C-terminal	domain
ketoacyl-synt	PF00109.21	gi|479326671|ref|YP_007866728.1|	-	2.4e-06	27.2	7.3	8.9e-06	25.3	0.6	2.8	2	1	1	3	3	3	2	Beta-ketoacyl	synthase,	N-terminal	domain
ACP_syn_III	PF08545.5	gi|479326671|ref|YP_007866728.1|	-	3e-05	23.5	0.2	0.0023	17.5	0.0	2.5	2	0	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
SpoVAD	PF07451.6	gi|479326671|ref|YP_007866728.1|	-	0.04	12.3	0.0	0.086	11.2	0.0	1.5	1	0	0	1	1	1	0	Stage	V	sporulation	protein	AD	(SpoVAD)
DUF35	PF01796.12	gi|479326672|ref|YP_007866729.1|	-	7.6e-12	45.2	0.4	1.1e-11	44.8	0.3	1.2	1	0	0	1	1	1	1	DUF35	OB-fold	domain
DUF35_N	PF12172.3	gi|479326672|ref|YP_007866729.1|	-	1.3e-11	44.0	0.1	2e-11	43.4	0.0	1.3	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
TrpBP	PF02081.10	gi|479326672|ref|YP_007866729.1|	-	0.035	13.5	0.0	0.059	12.8	0.0	1.3	1	0	0	1	1	1	0	Tryptophan	RNA-binding	attenuator	protein
Auto_anti-p27	PF06677.7	gi|479326672|ref|YP_007866729.1|	-	0.036	13.8	5.0	0.37	10.5	3.2	2.5	2	1	1	3	3	3	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zf-TFIIB	PF13453.1	gi|479326672|ref|YP_007866729.1|	-	0.056	12.6	0.2	11	5.3	0.0	2.5	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
DZR	PF12773.2	gi|479326672|ref|YP_007866729.1|	-	0.073	12.8	0.6	0.12	12.2	0.4	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
DUF4546	PF15079.1	gi|479326672|ref|YP_007866729.1|	-	0.098	11.7	0.4	0.16	11.1	0.3	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4546)
NMD3	PF04981.8	gi|479326672|ref|YP_007866729.1|	-	0.16	11.0	0.3	0.28	10.2	0.2	1.4	1	0	0	1	1	1	0	NMD3	family
PhnA_Zn_Ribbon	PF08274.7	gi|479326672|ref|YP_007866729.1|	-	0.16	11.7	2.4	0.88	9.4	0.0	2.3	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
zf-C4_Topoisom	PF01396.14	gi|479326672|ref|YP_007866729.1|	-	0.3	10.6	4.3	5.5	6.5	0.3	2.3	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
TF_Zn_Ribbon	PF08271.7	gi|479326672|ref|YP_007866729.1|	-	0.36	10.1	2.1	5.8	6.3	0.3	2.3	2	0	0	2	2	2	0	TFIIB	zinc-binding
zinc_ribbon_2	PF13240.1	gi|479326672|ref|YP_007866729.1|	-	0.91	9.0	5.1	2	7.9	0.3	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
3HCDH_N	PF02737.13	gi|479326673|ref|YP_007866730.1|	-	4.1e-63	212.2	0.1	5.6e-63	211.8	0.1	1.2	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
3HCDH	PF00725.17	gi|479326673|ref|YP_007866730.1|	-	2.3e-38	130.5	0.1	4.3e-29	100.7	0.1	2.7	2	0	0	2	2	2	2	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
NAD_binding_2	PF03446.10	gi|479326673|ref|YP_007866730.1|	-	0.00023	21.0	0.1	0.0013	18.6	0.0	2.1	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Acetyltransf_1	PF00583.19	gi|479326674|ref|YP_007866731.1|	-	1.4e-17	63.5	0.0	1.8e-17	63.1	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|479326674|ref|YP_007866731.1|	-	1.7e-15	56.9	0.1	2.4e-15	56.4	0.1	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|479326674|ref|YP_007866731.1|	-	1.8e-15	57.2	0.0	2.2e-15	56.9	0.0	1.0	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|479326674|ref|YP_007866731.1|	-	2.1e-13	50.4	0.0	2.5e-13	50.1	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|479326674|ref|YP_007866731.1|	-	4.1e-11	42.8	0.0	6.5e-11	42.1	0.0	1.3	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.1	gi|479326674|ref|YP_007866731.1|	-	3.4e-09	36.9	0.0	4.2e-09	36.7	0.0	1.0	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|479326674|ref|YP_007866731.1|	-	2.7e-07	30.2	0.0	4.2e-07	29.6	0.0	1.3	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_8	PF13523.1	gi|479326674|ref|YP_007866731.1|	-	1.2e-06	28.4	0.0	1.7e-06	27.9	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Mec-17	PF05301.6	gi|479326674|ref|YP_007866731.1|	-	6.5e-05	22.8	0.0	0.00018	21.4	0.0	1.8	2	0	0	2	2	2	1	Touch	receptor	neuron	protein	Mec-17
Acetyltransf_6	PF13480.1	gi|479326674|ref|YP_007866731.1|	-	0.0016	18.3	0.0	0.003	17.5	0.0	1.4	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.1	gi|479326674|ref|YP_007866731.1|	-	0.0025	17.6	0.0	0.0045	16.8	0.0	1.4	1	0	0	1	1	1	1	GCN5-related	N-acetyl-transferase
DUF3749	PF12568.3	gi|479326674|ref|YP_007866731.1|	-	0.023	14.2	0.0	0.037	13.6	0.0	1.5	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
PP_kinase_C	PF13090.1	gi|479326674|ref|YP_007866731.1|	-	0.096	11.2	0.0	0.12	10.9	0.0	1.1	1	0	0	1	1	1	0	Polyphosphate	kinase	C-terminal	domain
Acetyltransf_13	PF13880.1	gi|479326674|ref|YP_007866731.1|	-	0.1	12.3	0.0	0.18	11.5	0.0	1.4	1	0	0	1	1	1	0	ESCO1/2	acetyl-transferase
Malic_M	PF03949.10	gi|479326675|ref|YP_007866732.1|	-	2.7e-68	230.2	0.5	3.4e-68	229.9	0.3	1.1	1	0	0	1	1	1	1	Malic	enzyme,	NAD	binding	domain
malic	PF00390.14	gi|479326675|ref|YP_007866732.1|	-	4.1e-27	94.9	0.4	1.4e-19	70.3	0.1	2.5	1	1	1	2	2	2	2	Malic	enzyme,	N-terminal	domain
Ldr_toxin	PF13940.1	gi|479326675|ref|YP_007866732.1|	-	0.052	13.3	0.3	0.11	12.2	0.2	1.5	1	0	0	1	1	1	0	Toxin	Ldr,	type	I	toxin-antitoxin	system
Thi4	PF01946.12	gi|479326675|ref|YP_007866732.1|	-	0.082	11.9	0.1	0.17	10.9	0.0	1.5	1	0	0	1	1	1	0	Thi4	family
EamA	PF00892.15	gi|479326676|ref|YP_007866733.1|	-	6.8e-34	116.6	31.5	1.5e-19	70.3	7.0	2.2	2	0	0	2	2	2	2	EamA-like	transporter	family
EmrE	PF13536.1	gi|479326676|ref|YP_007866733.1|	-	0.0014	18.7	24.3	0.002	18.2	4.3	3.1	1	1	0	2	2	2	2	Multidrug	resistance	efflux	transporter
DrsE	PF02635.10	gi|479326677|ref|YP_007866734.1|	-	7.6e-10	38.8	0.0	8.4e-10	38.7	0.0	1.0	1	0	0	1	1	1	1	DsrE/DsrF-like	family
COX15-CtaA	PF02628.10	gi|479326678|ref|YP_007866735.1|	-	0.076	11.8	0.1	0.078	11.8	0.1	1.0	1	0	0	1	1	1	0	Cytochrome	oxidase	assembly	protein
MIase	PF02426.11	gi|479326679|ref|YP_007866736.1|	-	4.6e-10	39.1	0.0	5.3e-10	38.9	0.0	1.1	1	0	0	1	1	1	1	Muconolactone	delta-isomerase
Unstab_antitox	PF09720.5	gi|479326679|ref|YP_007866736.1|	-	0.023	14.3	0.0	0.055	13.1	0.0	1.6	1	0	0	1	1	1	0	Putative	addiction	module	component
GYD	PF08734.6	gi|479326679|ref|YP_007866736.1|	-	0.029	14.0	0.0	0.031	14.0	0.0	1.2	1	0	0	1	1	1	0	GYD	domain
AsnC_trans_reg	PF01037.16	gi|479326679|ref|YP_007866736.1|	-	0.032	13.9	0.0	0.057	13.1	0.0	1.4	1	1	0	1	1	1	0	AsnC	family
HisG_C	PF08029.6	gi|479326679|ref|YP_007866736.1|	-	0.076	12.9	0.1	1.7	8.6	0.0	2.1	1	1	1	2	2	2	0	HisG,	C-terminal	domain
Pribosyltran_N	PF13793.1	gi|479326679|ref|YP_007866736.1|	-	0.095	12.4	0.0	0.11	12.2	0.0	1.1	1	0	0	1	1	1	0	N-terminal	domain	of	ribose	phosphate	pyrophosphokinase
Grp1_Fun34_YaaH	PF01184.14	gi|479326680|ref|YP_007866737.1|	-	1.3e-48	165.1	29.2	2.5e-48	164.1	20.3	1.4	1	1	0	1	1	1	1	GPR1/FUN34/yaaH	family
AMP-binding	PF00501.23	gi|479326681|ref|YP_007866738.1|	-	2.2e-90	303.0	0.0	2.6e-90	302.7	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|479326681|ref|YP_007866738.1|	-	1.9e-22	79.9	0.3	6.3e-22	78.3	0.1	2.1	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
4HBT	PF03061.17	gi|479326682|ref|YP_007866739.1|	-	4.3e-13	49.2	0.0	5.3e-13	48.8	0.0	1.1	1	0	0	1	1	1	1	Thioesterase	superfamily
4HBT_3	PF13622.1	gi|479326682|ref|YP_007866739.1|	-	0.002	17.9	0.0	0.0024	17.6	0.0	1.1	1	0	0	1	1	1	1	Thioesterase-like	superfamily
SBP56	PF05694.6	gi|479326683|ref|YP_007866740.1|	-	3.3e-209	695.1	0.0	3.7e-209	694.9	0.0	1.0	1	0	0	1	1	1	1	56kDa	selenium	binding	protein	(SBP56)
Lactonase	PF10282.4	gi|479326683|ref|YP_007866740.1|	-	0.023	13.7	0.0	0.31	10.0	0.0	2.2	1	1	1	2	2	2	0	Lactonase,	7-bladed	beta-propeller
DUF1264	PF06884.6	gi|479326683|ref|YP_007866740.1|	-	0.056	12.8	0.0	0.11	11.9	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1264)
AGT	PF11440.3	gi|479326685|ref|YP_007866742.1|	-	0.081	11.7	0.1	0.089	11.6	0.1	1.0	1	0	0	1	1	1	0	DNA	alpha-glucosyltransferase
MFS_1	PF07690.11	gi|479326687|ref|YP_007866744.1|	-	6.1e-30	104.1	42.8	6.1e-30	104.1	29.7	1.6	1	1	0	1	1	1	1	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|479326687|ref|YP_007866744.1|	-	3.7e-08	31.9	4.3	3.7e-08	31.9	3.0	2.1	2	0	0	2	2	2	1	Transmembrane	secretion	effector
MFS_1_like	PF12832.2	gi|479326687|ref|YP_007866744.1|	-	0.016	14.9	1.0	0.016	14.9	0.7	3.5	3	1	1	4	4	4	0	MFS_1	like	family
MFS_1	PF07690.11	gi|479326688|ref|YP_007866745.1|	-	1.4e-25	89.7	56.9	1.5e-22	79.8	16.1	2.2	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|479326688|ref|YP_007866745.1|	-	3.2e-21	75.4	40.4	7.6e-18	64.3	28.0	2.1	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
ABC_tran	PF00005.22	gi|479326689|ref|YP_007866746.1|	-	6.6e-33	113.9	0.0	1.3e-32	112.9	0.0	1.5	2	0	0	2	2	1	1	ABC	transporter
AAA_21	PF13304.1	gi|479326689|ref|YP_007866746.1|	-	3.8e-12	46.7	0.1	1.4e-08	35.0	0.1	2.3	1	1	0	1	1	1	1	AAA	domain
TOBE_2	PF08402.5	gi|479326689|ref|YP_007866746.1|	-	3.5e-05	23.7	0.0	0.00011	22.1	0.0	1.9	2	0	0	2	2	2	1	TOBE	domain
SbcCD_C	PF13558.1	gi|479326689|ref|YP_007866746.1|	-	0.00077	19.3	0.3	0.0031	17.3	0.2	1.9	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_15	PF13175.1	gi|479326689|ref|YP_007866746.1|	-	0.0018	17.4	0.0	0.15	11.0	0.0	2.1	1	1	0	2	2	2	1	AAA	ATPase	domain
SMC_N	PF02463.14	gi|479326689|ref|YP_007866746.1|	-	0.0027	16.9	0.6	0.042	13.0	0.0	2.1	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
AAA_17	PF13207.1	gi|479326689|ref|YP_007866746.1|	-	0.0031	18.2	0.1	0.0088	16.8	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|479326689|ref|YP_007866746.1|	-	0.0074	16.1	0.1	1	9.2	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
AAA_10	PF12846.2	gi|479326689|ref|YP_007866746.1|	-	0.0098	15.3	0.0	0.21	10.9	0.0	2.1	2	0	0	2	2	2	1	AAA-like	domain
AAA_29	PF13555.1	gi|479326689|ref|YP_007866746.1|	-	0.038	13.5	0.0	0.085	12.4	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
DUF87	PF01935.12	gi|479326689|ref|YP_007866746.1|	-	0.046	13.5	0.1	0.11	12.2	0.1	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF87
AAA_23	PF13476.1	gi|479326689|ref|YP_007866746.1|	-	0.059	13.6	2.0	0.095	13.0	1.0	1.6	2	0	0	2	2	2	0	AAA	domain
DUF258	PF03193.11	gi|479326689|ref|YP_007866746.1|	-	0.13	11.4	0.0	0.24	10.5	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_22	PF13401.1	gi|479326689|ref|YP_007866746.1|	-	0.16	12.0	0.3	0.49	10.5	0.2	1.9	1	1	0	1	1	1	0	AAA	domain
BPD_transp_1	PF00528.17	gi|479326690|ref|YP_007866747.1|	-	1.8e-15	56.9	25.1	1.8e-15	56.9	17.4	2.7	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.17	gi|479326691|ref|YP_007866748.1|	-	6.3e-15	55.1	26.2	6.3e-15	55.1	18.2	2.1	2	0	0	2	2	2	2	Binding-protein-dependent	transport	system	inner	membrane	component
SBP_bac_1	PF01547.20	gi|479326692|ref|YP_007866749.1|	-	6e-11	42.6	12.1	6e-11	42.6	8.4	1.6	1	1	1	2	2	2	1	Bacterial	extracellular	solute-binding	protein
Shisa	PF13908.1	gi|479326692|ref|YP_007866749.1|	-	0.0014	18.8	0.3	0.0024	18.0	0.2	1.4	1	0	0	1	1	1	1	Wnt	and	FGF	inhibitory	regulator
DUF1628	PF07790.6	gi|479326692|ref|YP_007866749.1|	-	0.0049	17.5	3.4	0.011	16.5	2.4	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1628)
Peripla_BP_6	PF13458.1	gi|479326693|ref|YP_007866750.1|	-	7.2e-30	104.4	6.1	1.4e-29	103.5	4.2	1.4	1	1	0	1	1	1	1	Periplasmic	binding	protein
ANF_receptor	PF01094.23	gi|479326693|ref|YP_007866750.1|	-	5.7e-29	100.9	3.2	7.9e-29	100.5	2.2	1.2	1	0	0	1	1	1	1	Receptor	family	ligand	binding	region
LppC	PF04348.8	gi|479326693|ref|YP_007866750.1|	-	1.4e-12	46.9	0.7	2.7e-12	46.0	0.4	1.5	1	1	0	1	1	1	1	LppC	putative	lipoprotein
Peripla_BP_5	PF13433.1	gi|479326693|ref|YP_007866750.1|	-	2.4e-07	29.8	1.1	4.2e-07	29.0	0.8	1.4	1	1	0	1	1	1	1	Periplasmic	binding	protein	domain
SoxE	PF06525.6	gi|479326693|ref|YP_007866750.1|	-	0.0024	17.1	3.1	0.0054	16.0	2.1	1.7	1	0	0	1	1	1	1	Sulfocyanin	(SoxE)
Shisa	PF13908.1	gi|479326693|ref|YP_007866750.1|	-	0.07	13.3	2.1	0.12	12.5	1.4	1.4	1	0	0	1	1	1	0	Wnt	and	FGF	inhibitory	regulator
Sigma_reg_N	PF13800.1	gi|479326693|ref|YP_007866750.1|	-	0.18	11.8	2.7	0.28	11.2	0.4	2.2	2	0	0	2	2	2	0	Sigma	factor	regulator	N-terminal
DUF2771	PF10969.3	gi|479326693|ref|YP_007866750.1|	-	0.41	9.9	2.4	3.2	7.0	0.4	2.7	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2771)
ABC_tran	PF00005.22	gi|479326694|ref|YP_007866751.1|	-	1.6e-32	112.6	0.0	2.1e-32	112.3	0.0	1.1	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|479326694|ref|YP_007866751.1|	-	7.9e-15	55.5	3.5	5.6e-13	49.4	2.4	2.1	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|479326694|ref|YP_007866751.1|	-	1.2e-08	34.5	0.1	0.00035	19.8	0.1	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|479326694|ref|YP_007866751.1|	-	3.9e-07	29.5	0.0	7.1e-07	28.6	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
BCA_ABC_TP_C	PF12399.3	gi|479326694|ref|YP_007866751.1|	-	8.5e-07	28.5	0.0	1.4e-06	27.8	0.0	1.4	1	0	0	1	1	1	1	Branched-chain	amino	acid	ATP-binding	cassette	transporter
AAA_23	PF13476.1	gi|479326694|ref|YP_007866751.1|	-	5.3e-06	26.9	0.9	8.9e-06	26.1	0.2	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|479326694|ref|YP_007866751.1|	-	0.0001	21.4	0.9	0.016	14.2	0.1	2.1	2	0	0	2	2	2	2	AAA	ATPase	domain
DUF258	PF03193.11	gi|479326694|ref|YP_007866751.1|	-	0.00046	19.4	0.0	0.00069	18.8	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
Arch_ATPase	PF01637.13	gi|479326694|ref|YP_007866751.1|	-	0.00082	19.1	0.1	0.035	13.8	0.0	2.1	2	0	0	2	2	2	1	Archaeal	ATPase
AAA_22	PF13401.1	gi|479326694|ref|YP_007866751.1|	-	0.0021	18.2	0.3	0.032	14.3	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|479326694|ref|YP_007866751.1|	-	0.0032	17.4	0.1	0.038	13.9	0.0	2.1	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_10	PF12846.2	gi|479326694|ref|YP_007866751.1|	-	0.0076	15.7	0.8	0.13	11.7	0.3	2.2	2	0	0	2	2	2	1	AAA-like	domain
Gtr1_RagA	PF04670.7	gi|479326694|ref|YP_007866751.1|	-	0.0098	15.0	0.1	0.09	11.9	0.1	2.1	1	1	0	1	1	1	1	Gtr1/RagA	G	protein	conserved	region
AAA_13	PF13166.1	gi|479326694|ref|YP_007866751.1|	-	0.017	13.6	0.1	0.022	13.2	0.1	1.1	1	0	0	1	1	1	0	AAA	domain
AAA_19	PF13245.1	gi|479326694|ref|YP_007866751.1|	-	0.026	14.2	0.0	0.049	13.3	0.0	1.4	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_33	PF13671.1	gi|479326694|ref|YP_007866751.1|	-	0.028	14.2	0.0	0.09	12.6	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
MutS_V	PF00488.16	gi|479326694|ref|YP_007866751.1|	-	0.038	13.4	0.0	0.074	12.4	0.0	1.4	1	0	0	1	1	1	0	MutS	domain	V
MMR_HSR1	PF01926.18	gi|479326694|ref|YP_007866751.1|	-	0.041	13.8	0.1	0.091	12.7	0.0	1.6	1	0	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA	PF00004.24	gi|479326694|ref|YP_007866751.1|	-	0.073	13.2	0.2	0.2	11.8	0.1	2.0	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Rad17	PF03215.10	gi|479326694|ref|YP_007866751.1|	-	0.082	11.5	0.0	0.13	10.9	0.0	1.3	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
Mg_chelatase	PF01078.16	gi|479326694|ref|YP_007866751.1|	-	0.083	12.0	0.0	0.15	11.1	0.0	1.4	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
AAA_17	PF13207.1	gi|479326694|ref|YP_007866751.1|	-	0.095	13.5	1.0	0.89	10.3	0.1	2.3	2	1	0	2	2	2	0	AAA	domain
ABC_tran	PF00005.22	gi|479326695|ref|YP_007866752.1|	-	8e-34	116.8	0.0	1.2e-33	116.3	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|479326695|ref|YP_007866752.1|	-	2.5e-13	50.6	5.5	9.5e-11	42.1	3.8	2.3	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|479326695|ref|YP_007866752.1|	-	3.8e-07	29.5	3.4	8.6e-06	25.1	2.4	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_22	PF13401.1	gi|479326695|ref|YP_007866752.1|	-	1e-05	25.6	1.0	0.00014	22.0	0.7	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|479326695|ref|YP_007866752.1|	-	3.6e-05	22.9	5.0	0.0072	15.4	1.6	2.3	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|479326695|ref|YP_007866752.1|	-	0.00016	22.0	7.9	0.00045	20.6	5.5	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|479326695|ref|YP_007866752.1|	-	0.00026	20.5	0.5	0.004	16.6	0.1	1.9	1	1	0	2	2	2	1	AAA-like	domain
AAA_29	PF13555.1	gi|479326695|ref|YP_007866752.1|	-	0.00048	19.6	0.2	0.00091	18.7	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_14	PF13173.1	gi|479326695|ref|YP_007866752.1|	-	0.0017	18.2	1.5	0.026	14.4	1.0	2.3	1	1	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|479326695|ref|YP_007866752.1|	-	0.0023	18.7	0.1	0.0035	18.1	0.1	1.6	1	1	0	1	1	1	1	AAA	domain
T2SE	PF00437.15	gi|479326695|ref|YP_007866752.1|	-	0.0036	16.2	0.1	0.0072	15.2	0.1	1.4	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
Rad17	PF03215.10	gi|479326695|ref|YP_007866752.1|	-	0.0047	15.6	0.2	0.0067	15.1	0.1	1.4	1	1	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
AAA_16	PF13191.1	gi|479326695|ref|YP_007866752.1|	-	0.005	16.8	0.0	0.015	15.3	0.0	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
MutS_V	PF00488.16	gi|479326695|ref|YP_007866752.1|	-	0.005	16.2	0.0	0.0082	15.5	0.0	1.3	1	0	0	1	1	1	1	MutS	domain	V
AAA_33	PF13671.1	gi|479326695|ref|YP_007866752.1|	-	0.005	16.7	0.0	0.0079	16.0	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_25	PF13481.1	gi|479326695|ref|YP_007866752.1|	-	0.0051	16.2	0.0	0.018	14.4	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|479326695|ref|YP_007866752.1|	-	0.0057	16.1	0.1	0.011	15.2	0.1	1.4	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
Miro	PF08477.8	gi|479326695|ref|YP_007866752.1|	-	0.0062	17.0	0.0	0.013	15.9	0.0	1.6	1	0	0	1	1	1	1	Miro-like	protein
AAA_18	PF13238.1	gi|479326695|ref|YP_007866752.1|	-	0.011	16.0	0.4	0.021	15.1	0.3	1.7	1	1	0	1	1	1	0	AAA	domain
NB-ARC	PF00931.17	gi|479326695|ref|YP_007866752.1|	-	0.012	14.4	0.6	0.48	9.2	0.0	2.1	2	0	0	2	2	2	0	NB-ARC	domain
DUF258	PF03193.11	gi|479326695|ref|YP_007866752.1|	-	0.014	14.5	0.0	0.024	13.8	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
Dynamin_N	PF00350.18	gi|479326695|ref|YP_007866752.1|	-	0.014	15.1	1.7	0.049	13.4	1.2	1.8	1	1	0	1	1	1	0	Dynamin	family
MobB	PF03205.9	gi|479326695|ref|YP_007866752.1|	-	0.015	15.0	0.3	0.033	13.8	0.2	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NACHT	PF05729.7	gi|479326695|ref|YP_007866752.1|	-	0.015	14.9	0.5	0.038	13.6	0.1	1.8	2	0	0	2	2	2	0	NACHT	domain
PPV_E1_C	PF00519.12	gi|479326695|ref|YP_007866752.1|	-	0.018	13.6	0.1	0.029	13.0	0.0	1.2	1	0	0	1	1	1	0	Papillomavirus	helicase
ABC_ATPase	PF09818.4	gi|479326695|ref|YP_007866752.1|	-	0.025	13.1	0.1	0.36	9.3	0.1	2.2	2	1	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
AAA_24	PF13479.1	gi|479326695|ref|YP_007866752.1|	-	0.025	14.1	0.6	0.06	12.9	0.4	1.6	2	0	0	2	2	2	0	AAA	domain
Zeta_toxin	PF06414.7	gi|479326695|ref|YP_007866752.1|	-	0.028	13.4	0.0	0.049	12.7	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
MMR_HSR1	PF01926.18	gi|479326695|ref|YP_007866752.1|	-	0.029	14.3	1.9	0.14	12.1	1.3	2.0	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
Arch_ATPase	PF01637.13	gi|479326695|ref|YP_007866752.1|	-	0.029	14.0	1.1	0.055	13.1	0.7	1.8	1	1	0	1	1	1	0	Archaeal	ATPase
IstB_IS21	PF01695.12	gi|479326695|ref|YP_007866752.1|	-	0.031	13.6	0.6	0.34	10.3	0.0	2.2	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA_30	PF13604.1	gi|479326695|ref|YP_007866752.1|	-	0.037	13.5	0.0	0.073	12.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
SbcCD_C	PF13558.1	gi|479326695|ref|YP_007866752.1|	-	0.039	13.8	0.0	0.38	10.6	0.0	2.2	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
Pox_A32	PF04665.7	gi|479326695|ref|YP_007866752.1|	-	0.048	12.9	1.1	0.13	11.5	0.1	1.9	2	0	0	2	2	2	0	Poxvirus	A32	protein
RNA_helicase	PF00910.17	gi|479326695|ref|YP_007866752.1|	-	0.097	12.8	0.1	0.17	12.0	0.1	1.5	1	1	0	1	1	1	0	RNA	helicase
ATP_bind_1	PF03029.12	gi|479326695|ref|YP_007866752.1|	-	0.12	11.9	0.2	0.22	11.0	0.1	1.4	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
BPD_transp_2	PF02653.11	gi|479326696|ref|YP_007866753.1|	-	3.2e-35	121.3	40.0	4.2e-35	121.0	27.8	1.2	1	0	0	1	1	1	1	Branched-chain	amino	acid	transport	system	/	permease	component
PgaD	PF13994.1	gi|479326696|ref|YP_007866753.1|	-	0.47	9.9	0.0	0.47	9.9	0.0	2.4	2	1	0	2	2	2	0	PgaD-like	protein
BPD_transp_2	PF02653.11	gi|479326697|ref|YP_007866754.1|	-	2.1e-40	138.4	36.4	2.4e-40	138.1	25.2	1.0	1	0	0	1	1	1	1	Branched-chain	amino	acid	transport	system	/	permease	component
Coa1	PF08695.5	gi|479326697|ref|YP_007866754.1|	-	0.1	12.1	0.0	0.23	10.9	0.0	1.6	1	0	0	1	1	1	0	Cytochrome	oxidase	complex	assembly	protein	1
PaREP1	PF05942.6	gi|479326698|ref|YP_007866755.1|	-	7.6e-20	70.8	0.0	1e-19	70.4	0.0	1.2	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
Creatininase	PF02633.9	gi|479326700|ref|YP_007866757.1|	-	2.9e-55	186.9	0.0	3.4e-55	186.7	0.0	1.0	1	0	0	1	1	1	1	Creatinine	amidohydrolase
AAA	PF00004.24	gi|479326701|ref|YP_007866758.1|	-	8.8e-76	252.4	0.0	3.5e-37	127.5	0.0	2.6	3	0	0	3	3	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_17	PF13207.1	gi|479326701|ref|YP_007866758.1|	-	1.3e-20	74.3	0.6	2.4e-10	41.2	0.0	3.3	2	2	0	2	2	2	2	AAA	domain
AAA_22	PF13401.1	gi|479326701|ref|YP_007866758.1|	-	2.4e-15	56.8	7.2	0.00019	21.5	0.1	4.9	3	2	1	4	4	3	3	AAA	domain
AAA_18	PF13238.1	gi|479326701|ref|YP_007866758.1|	-	5.8e-15	55.7	0.0	3.2e-06	27.4	0.0	3.0	2	1	0	2	2	2	2	AAA	domain
AAA_5	PF07728.9	gi|479326701|ref|YP_007866758.1|	-	6.6e-14	51.8	2.6	1.2e-05	25.0	0.3	4.2	2	2	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
AAA_14	PF13173.1	gi|479326701|ref|YP_007866758.1|	-	6.6e-14	51.9	0.0	9.1e-07	28.8	0.0	2.7	2	1	0	2	2	2	2	AAA	domain
RuvB_N	PF05496.7	gi|479326701|ref|YP_007866758.1|	-	7.3e-14	51.3	0.0	1.4e-06	27.5	0.0	2.7	2	1	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_33	PF13671.1	gi|479326701|ref|YP_007866758.1|	-	7e-12	45.4	0.0	7.3e-06	25.9	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
TIP49	PF06068.8	gi|479326701|ref|YP_007866758.1|	-	6.1e-11	41.6	0.2	0.00014	20.6	0.0	2.6	3	0	0	3	3	2	2	TIP49	C-terminus
AAA_16	PF13191.1	gi|479326701|ref|YP_007866758.1|	-	7.7e-11	42.3	0.3	0.0014	18.6	0.0	3.8	2	2	1	3	3	3	2	AAA	ATPase	domain
AAA_28	PF13521.1	gi|479326701|ref|YP_007866758.1|	-	2.2e-10	40.7	0.0	0.00027	20.9	0.0	3.2	3	0	0	3	3	3	2	AAA	domain
RNA_helicase	PF00910.17	gi|479326701|ref|YP_007866758.1|	-	7.4e-10	38.9	0.0	0.00099	19.2	0.0	3.0	3	0	0	3	3	2	2	RNA	helicase
IstB_IS21	PF01695.12	gi|479326701|ref|YP_007866758.1|	-	1.1e-09	37.9	0.8	0.00077	18.9	0.0	3.4	3	1	0	4	4	3	2	IstB-like	ATP	binding	protein
Zeta_toxin	PF06414.7	gi|479326701|ref|YP_007866758.1|	-	2.3e-09	36.6	0.0	0.0011	18.1	0.0	2.8	2	1	0	2	2	2	2	Zeta	toxin
AAA_2	PF07724.9	gi|479326701|ref|YP_007866758.1|	-	3.2e-09	36.9	0.0	0.00012	22.0	0.0	2.9	2	1	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
DUF815	PF05673.8	gi|479326701|ref|YP_007866758.1|	-	3.8e-09	35.8	0.0	0.0012	17.8	0.0	2.5	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
SKI	PF01202.17	gi|479326701|ref|YP_007866758.1|	-	1.1e-08	35.1	0.0	0.0046	16.8	0.0	2.7	2	0	0	2	2	2	2	Shikimate	kinase
AAA_19	PF13245.1	gi|479326701|ref|YP_007866758.1|	-	1.3e-08	34.4	0.1	0.0029	17.3	0.0	2.5	2	0	0	2	2	2	2	Part	of	AAA	domain
Sigma54_activat	PF00158.21	gi|479326701|ref|YP_007866758.1|	-	9.2e-08	31.7	0.2	0.41	10.1	0.0	3.8	4	0	0	4	4	3	2	Sigma-54	interaction	domain
AAA_25	PF13481.1	gi|479326701|ref|YP_007866758.1|	-	2.1e-07	30.5	6.0	0.088	12.1	0.0	4.2	3	1	0	4	4	4	2	AAA	domain
Mg_chelatase	PF01078.16	gi|479326701|ref|YP_007866758.1|	-	2.7e-07	29.9	0.0	0.022	13.9	0.0	2.6	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_24	PF13479.1	gi|479326701|ref|YP_007866758.1|	-	3.4e-07	30.0	3.9	0.0051	16.4	0.1	2.6	2	1	0	2	2	2	2	AAA	domain
Sigma54_activ_2	PF14532.1	gi|479326701|ref|YP_007866758.1|	-	4e-07	30.1	0.0	0.0029	17.6	0.0	2.7	2	0	0	2	2	2	2	Sigma-54	interaction	domain
Arch_ATPase	PF01637.13	gi|479326701|ref|YP_007866758.1|	-	7.1e-07	29.1	0.3	0.029	14.0	0.0	3.9	2	2	0	3	3	3	2	Archaeal	ATPase
UPF0079	PF02367.12	gi|479326701|ref|YP_007866758.1|	-	4.4e-06	26.3	0.0	0.13	11.9	0.0	3.1	3	0	0	3	3	3	2	Uncharacterised	P-loop	hydrolase	UPF0079
Parvo_NS1	PF01057.12	gi|479326701|ref|YP_007866758.1|	-	6.6e-06	25.1	0.1	0.044	12.6	0.0	2.3	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
NACHT	PF05729.7	gi|479326701|ref|YP_007866758.1|	-	1.2e-05	25.0	1.0	0.32	10.6	0.0	3.9	3	1	1	4	4	4	2	NACHT	domain
Cytidylate_kin2	PF13189.1	gi|479326701|ref|YP_007866758.1|	-	1.3e-05	25.1	0.0	0.015	15.2	0.0	2.9	3	0	0	3	3	2	1	Cytidylate	kinase-like	family
ABC_tran	PF00005.22	gi|479326701|ref|YP_007866758.1|	-	1.7e-05	25.1	0.0	0.16	12.3	0.0	2.7	2	0	0	2	2	2	2	ABC	transporter
KTI12	PF08433.5	gi|479326701|ref|YP_007866758.1|	-	2e-05	23.9	1.0	0.063	12.4	0.0	3.1	3	0	0	3	3	3	2	Chromatin	associated	protein	KTI12
NB-ARC	PF00931.17	gi|479326701|ref|YP_007866758.1|	-	3.5e-05	22.8	0.0	0.19	10.5	0.0	3.3	5	0	0	5	5	3	2	NB-ARC	domain
NTPase_1	PF03266.10	gi|479326701|ref|YP_007866758.1|	-	4.7e-05	23.1	0.6	0.26	11.0	0.0	3.6	4	0	0	4	4	3	1	NTPase
AAA_3	PF07726.6	gi|479326701|ref|YP_007866758.1|	-	6e-05	22.6	0.0	0.44	10.1	0.0	2.6	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
KaiC	PF06745.8	gi|479326701|ref|YP_007866758.1|	-	7.1e-05	22.0	2.8	3	6.9	0.1	4.4	3	1	1	4	4	4	0	KaiC
AAA_23	PF13476.1	gi|479326701|ref|YP_007866758.1|	-	8.1e-05	23.0	5.8	0.06	13.6	0.6	3.1	3	1	0	3	3	2	2	AAA	domain
AAA_11	PF13086.1	gi|479326701|ref|YP_007866758.1|	-	9.8e-05	22.0	0.0	0.31	10.5	0.0	2.5	2	1	0	2	2	2	2	AAA	domain
Bac_DnaA	PF00308.13	gi|479326701|ref|YP_007866758.1|	-	0.00013	21.7	0.1	0.53	9.8	0.0	2.9	2	1	0	2	2	2	2	Bacterial	dnaA	protein
PhoH	PF02562.11	gi|479326701|ref|YP_007866758.1|	-	0.00013	21.2	0.2	0.25	10.5	0.0	2.9	2	0	0	2	2	2	2	PhoH-like	protein
AAA_30	PF13604.1	gi|479326701|ref|YP_007866758.1|	-	0.00019	21.0	0.6	0.35	10.4	0.1	2.8	3	0	0	3	3	2	1	AAA	domain
KAP_NTPase	PF07693.9	gi|479326701|ref|YP_007866758.1|	-	0.00047	19.2	1.3	0.5	9.3	0.1	3.7	2	2	2	4	4	4	1	KAP	family	P-loop	domain
T2SE	PF00437.15	gi|479326701|ref|YP_007866758.1|	-	0.00073	18.5	0.0	0.23	10.3	0.0	2.6	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
Rad17	PF03215.10	gi|479326701|ref|YP_007866758.1|	-	0.00078	18.2	0.0	0.3	9.7	0.0	2.4	2	0	0	2	2	2	1	Rad17	cell	cycle	checkpoint	protein
Viral_helicase1	PF01443.13	gi|479326701|ref|YP_007866758.1|	-	0.0011	18.4	0.0	0.1	12.0	0.0	2.7	3	0	0	3	3	2	1	Viral	(Superfamily	1)	RNA	helicase
AAA_10	PF12846.2	gi|479326701|ref|YP_007866758.1|	-	0.0014	18.1	8.9	2.8	7.2	0.1	4.7	4	2	2	6	6	4	0	AAA-like	domain
AAA_29	PF13555.1	gi|479326701|ref|YP_007866758.1|	-	0.0018	17.7	0.0	1.8	8.1	0.0	2.5	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
DUF258	PF03193.11	gi|479326701|ref|YP_007866758.1|	-	0.002	17.3	0.0	0.93	8.6	0.0	2.3	2	0	0	2	2	2	1	Protein	of	unknown	function,	DUF258
MMR_HSR1	PF01926.18	gi|479326701|ref|YP_007866758.1|	-	0.0022	17.9	0.1	1.7	8.6	0.0	3.2	3	0	0	3	3	2	1	50S	ribosome-binding	GTPase
PduV-EutP	PF10662.4	gi|479326701|ref|YP_007866758.1|	-	0.0024	17.3	0.0	1.8	8.0	0.0	2.5	2	0	0	2	2	2	1	Ethanolamine	utilisation	-	propanediol	utilisation
IPT	PF01745.11	gi|479326701|ref|YP_007866758.1|	-	0.0024	17.0	0.0	1.5	7.9	0.0	2.5	2	0	0	2	2	2	1	Isopentenyl	transferase
CPT	PF07931.7	gi|479326701|ref|YP_007866758.1|	-	0.0028	17.3	0.0	1.7	8.2	0.0	2.4	2	0	0	2	2	2	1	Chloramphenicol	phosphotransferase-like	protein
ADK	PF00406.17	gi|479326701|ref|YP_007866758.1|	-	0.0036	17.1	0.0	1.5	8.7	0.0	2.9	2	0	0	2	2	2	1	Adenylate	kinase
APS_kinase	PF01583.15	gi|479326701|ref|YP_007866758.1|	-	0.0049	16.5	0.0	2.5	7.7	0.0	2.4	2	0	0	2	2	2	0	Adenylylsulphate	kinase
6PF2K	PF01591.13	gi|479326701|ref|YP_007866758.1|	-	0.0059	15.7	0.0	0.91	8.5	0.0	3.1	4	0	0	4	4	3	1	6-phosphofructo-2-kinase
DUF2075	PF09848.4	gi|479326701|ref|YP_007866758.1|	-	0.0061	15.5	0.0	2.4	7.0	0.0	2.3	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
MobB	PF03205.9	gi|479326701|ref|YP_007866758.1|	-	0.0071	16.0	0.0	1.9	8.2	0.0	2.7	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
SRP54	PF00448.17	gi|479326701|ref|YP_007866758.1|	-	0.018	14.4	0.5	3.6	6.9	0.1	2.8	3	0	0	3	3	2	0	SRP54-type	protein,	GTPase	domain
Guanylate_kin	PF00625.16	gi|479326701|ref|YP_007866758.1|	-	0.018	14.4	0.0	4.6	6.6	0.0	2.8	2	0	0	2	2	2	0	Guanylate	kinase
ArgK	PF03308.11	gi|479326701|ref|YP_007866758.1|	-	0.039	12.7	0.1	0.44	9.2	0.0	2.2	2	0	0	2	2	2	0	ArgK	protein
ResIII	PF04851.10	gi|479326701|ref|YP_007866758.1|	-	0.043	13.6	0.0	8.8	6.1	0.0	2.5	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
MCM	PF00493.18	gi|479326701|ref|YP_007866758.1|	-	0.053	12.3	0.0	20	3.8	0.0	3.2	3	0	0	3	3	3	0	MCM2/3/5	family
Thymidylate_kin	PF02223.12	gi|479326701|ref|YP_007866758.1|	-	0.056	12.8	0.0	11	5.3	0.0	2.6	2	0	0	2	2	2	0	Thymidylate	kinase
AAA_13	PF13166.1	gi|479326701|ref|YP_007866758.1|	-	0.074	11.5	1.1	7.3	4.9	0.0	2.7	3	0	0	3	3	3	0	AAA	domain
ATP-synt_ab	PF00006.20	gi|479326701|ref|YP_007866758.1|	-	0.095	12.1	0.0	8.9	5.7	0.0	2.3	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
PEPCK_ATP	PF01293.15	gi|479326701|ref|YP_007866758.1|	-	0.12	10.8	0.0	1.1	7.7	0.0	2.1	2	0	0	2	2	2	0	Phosphoenolpyruvate	carboxykinase
SMC_N	PF02463.14	gi|479326701|ref|YP_007866758.1|	-	0.14	11.4	0.6	8.6	5.5	0.0	2.8	3	0	0	3	3	3	0	RecF/RecN/SMC	N	terminal	domain
cobW	PF02492.14	gi|479326701|ref|YP_007866758.1|	-	0.15	11.5	0.4	7.7	5.9	0.0	2.5	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
FtsK_SpoIIIE	PF01580.13	gi|479326701|ref|YP_007866758.1|	-	0.17	11.3	0.2	13	5.1	0.0	3.2	3	0	0	3	3	3	0	FtsK/SpoIIIE	family
AAA_21	PF13304.1	gi|479326701|ref|YP_007866758.1|	-	0.35	10.7	20.5	0.51	10.2	0.1	4.8	4	2	2	6	6	4	0	AAA	domain
DUF3464	PF11947.3	gi|479326702|ref|YP_007866759.1|	-	0.7	9.3	1.9	1.9	7.9	1.3	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3464)
MS_channel	PF00924.13	gi|479326703|ref|YP_007866760.1|	-	3.7e-18	65.6	9.5	3.7e-18	65.6	6.6	1.7	2	0	0	2	2	2	1	Mechanosensitive	ion	channel
Strabismus	PF06638.6	gi|479326703|ref|YP_007866760.1|	-	1.5	7.0	6.6	2	6.6	4.6	1.1	1	0	0	1	1	1	0	Strabismus	protein
DUF3211	PF11485.3	gi|479326704|ref|YP_007866761.1|	-	4.3e-37	127.1	0.9	4.9e-37	127.0	0.6	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3211)
HTH_45	PF14947.1	gi|479326705|ref|YP_007866762.1|	-	6.6e-23	80.3	0.6	8.9e-23	79.9	0.4	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix
DUF4364	PF14277.1	gi|479326705|ref|YP_007866762.1|	-	9.1e-05	22.1	0.1	0.00011	21.8	0.1	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
DUF1495	PF07381.6	gi|479326705|ref|YP_007866762.1|	-	0.044	13.4	0.2	0.074	12.7	0.0	1.5	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain	(DUF1495)
TBPIP	PF07106.8	gi|479326705|ref|YP_007866762.1|	-	0.045	13.2	0.4	0.058	12.9	0.3	1.1	1	0	0	1	1	1	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
HTH_IclR	PF09339.5	gi|479326705|ref|YP_007866762.1|	-	0.073	12.6	0.0	0.12	11.9	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
DUF762	PF05555.6	gi|479326705|ref|YP_007866762.1|	-	0.076	12.2	0.1	0.09	12.0	0.1	1.1	1	0	0	1	1	1	0	Coxiella	burnetii	protein	of	unknown	function	(DUF762)
TrmB	PF01978.14	gi|479326705|ref|YP_007866762.1|	-	0.079	12.6	0.1	0.48	10.1	0.0	2.0	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
DUF3781	PF12636.2	gi|479326705|ref|YP_007866762.1|	-	0.55	10.2	2.7	1.8	8.5	0.2	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3781)
TrkA_N	PF02254.13	gi|479326706|ref|YP_007866763.1|	-	2.2e-13	50.1	0.4	4e-13	49.3	0.3	1.4	1	0	0	1	1	1	1	TrkA-N	domain
TrkA_C	PF02080.16	gi|479326706|ref|YP_007866763.1|	-	3.4e-07	29.7	0.1	1.5e-06	27.6	0.0	2.1	2	0	0	2	2	2	1	TrkA-C	domain
MCR_gamma	PF02240.11	gi|479326706|ref|YP_007866763.1|	-	0.067	12.3	0.0	0.1	11.7	0.0	1.2	1	0	0	1	1	1	0	Methyl-coenzyme	M	reductase	gamma	subunit
Ion_trans_2	PF07885.11	gi|479326706|ref|YP_007866763.1|	-	0.17	11.6	8.8	0.31	10.7	6.1	1.5	1	0	0	1	1	1	0	Ion	channel
Oxidored_molyb	PF00174.14	gi|479326707|ref|YP_007866764.1|	-	8.8e-40	135.8	0.0	1e-39	135.7	0.0	1.0	1	0	0	1	1	1	1	Oxidoreductase	molybdopterin	binding	domain
UPF0183	PF03676.9	gi|479326707|ref|YP_007866764.1|	-	0.053	12.0	0.0	0.68	8.4	0.0	2.0	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0183)
Molybdopterin	PF00384.17	gi|479326709|ref|YP_007866766.1|	-	5.5e-87	292.2	0.0	7.1e-87	291.9	0.0	1.1	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase
Molydop_binding	PF01568.16	gi|479326709|ref|YP_007866766.1|	-	1.8e-21	76.0	0.0	4.2e-21	74.8	0.0	1.6	1	0	0	1	1	1	1	Molydopterin	dinucleotide	binding	domain
Molybdop_Fe4S4	PF04879.11	gi|479326709|ref|YP_007866766.1|	-	2.7e-18	65.5	0.4	2.7e-18	65.5	0.3	2.3	2	0	0	2	2	2	1	Molybdopterin	oxidoreductase	Fe4S4	domain
Fer2_4	PF13510.1	gi|479326709|ref|YP_007866766.1|	-	3.2e-16	58.8	0.0	7.3e-16	57.7	0.0	1.6	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4	PF00037.22	gi|479326709|ref|YP_007866766.1|	-	2.7e-11	42.5	19.4	3.7e-06	26.2	2.4	3.7	3	0	0	3	3	3	2	4Fe-4S	binding	domain
NADH-G_4Fe-4S_3	PF10588.4	gi|479326709|ref|YP_007866766.1|	-	1.2e-09	37.2	0.8	1.2e-09	37.2	0.6	2.1	2	0	0	2	2	1	1	NADH-ubiquinone	oxidoreductase-G	iron-sulfur	binding	region
Fer4_21	PF14697.1	gi|479326709|ref|YP_007866766.1|	-	5.7e-08	32.5	6.0	5.7e-08	32.5	4.1	2.5	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer2	PF00111.22	gi|479326709|ref|YP_007866766.1|	-	9.5e-08	31.6	4.1	1.4e-07	31.1	0.1	2.7	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_6	PF12837.2	gi|479326709|ref|YP_007866766.1|	-	1.7e-07	30.7	19.2	0.00028	20.6	2.1	3.5	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|479326709|ref|YP_007866766.1|	-	2.1e-07	31.1	9.5	2.1e-07	31.1	6.6	3.3	3	1	0	3	3	3	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|479326709|ref|YP_007866766.1|	-	2.6e-06	27.1	11.3	2.6e-06	27.1	7.9	3.4	2	2	2	4	4	3	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|479326709|ref|YP_007866766.1|	-	2.9e-06	27.4	10.0	2.9e-06	27.4	6.9	3.4	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|479326709|ref|YP_007866766.1|	-	7.9e-06	25.8	9.0	7.9e-06	25.8	6.3	2.7	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|479326709|ref|YP_007866766.1|	-	2.3e-05	24.0	11.2	0.00051	19.8	1.0	3.6	4	0	0	4	4	3	2	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|479326709|ref|YP_007866766.1|	-	0.00029	21.5	15.1	0.0031	18.2	2.2	3.6	3	1	0	3	3	3	2	4Fe-4S	double	cluster	binding	domain
Fer4_17	PF13534.1	gi|479326709|ref|YP_007866766.1|	-	0.001	19.3	15.0	0.14	12.4	2.4	3.0	2	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|479326709|ref|YP_007866766.1|	-	0.0017	18.8	5.6	0.16	12.5	1.1	2.9	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.1	gi|479326709|ref|YP_007866766.1|	-	0.0024	18.2	1.0	0.0024	18.2	0.7	3.2	3	1	0	3	3	2	1	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|479326709|ref|YP_007866766.1|	-	0.0061	16.9	6.5	1.2	9.5	0.1	2.8	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_3	PF12798.2	gi|479326709|ref|YP_007866766.1|	-	1.9	9.2	34.4	0.057	14.0	5.4	3.8	4	0	0	4	4	3	0	4Fe-4S	binding	domain
DUF1641	PF07849.6	gi|479326710|ref|YP_007866767.1|	-	3.7e-15	55.2	0.1	6.3e-15	54.4	0.1	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1641)
FdhD-NarQ	PF02634.10	gi|479326711|ref|YP_007866768.1|	-	1.3e-73	247.3	0.0	1.5e-73	247.1	0.0	1.0	1	0	0	1	1	1	1	FdhD/NarQ	family
PPDK_N	PF01326.14	gi|479326712|ref|YP_007866769.1|	-	2.2e-71	240.6	0.0	2.6e-71	240.3	0.0	1.0	1	0	0	1	1	1	1	Pyruvate	phosphate	dikinase,	PEP/pyruvate	binding	domain
CbiA	PF01656.18	gi|479326712|ref|YP_007866769.1|	-	0.11	11.8	0.2	0.2	11.0	0.1	1.6	1	1	1	2	2	2	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Fer4_10	PF13237.1	gi|479326713|ref|YP_007866770.1|	-	1.1e-08	34.7	10.9	1.6e-08	34.2	7.6	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|479326713|ref|YP_007866770.1|	-	2.4e-08	34.1	11.3	0.00036	20.8	2.0	2.2	1	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|479326713|ref|YP_007866770.1|	-	6.4e-08	32.0	14.0	4.5e-05	23.1	2.2	2.4	2	1	0	2	2	2	2	4Fe-4S	binding	domain
Fer4	PF00037.22	gi|479326713|ref|YP_007866770.1|	-	4.1e-07	29.3	18.7	9.3e-06	25.0	2.5	3.2	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|479326713|ref|YP_007866770.1|	-	6.4e-07	28.9	17.6	0.00048	19.8	2.3	2.7	2	1	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|479326713|ref|YP_007866770.1|	-	2.8e-06	27.4	11.5	2.2e-05	24.6	8.4	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|479326713|ref|YP_007866770.1|	-	1.9e-05	24.6	6.0	0.0003	20.7	0.4	2.2	2	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|479326713|ref|YP_007866770.1|	-	0.0001	22.3	13.7	0.0018	18.4	2.5	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
ETF_QO	PF05187.8	gi|479326713|ref|YP_007866770.1|	-	0.0002	21.3	0.2	0.00026	20.9	0.1	1.2	1	0	0	1	1	1	1	Electron	transfer	flavoprotein-ubiquinone	oxidoreductase
Fer4_11	PF13247.1	gi|479326713|ref|YP_007866770.1|	-	0.00046	20.0	5.2	0.00069	19.4	3.6	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|479326713|ref|YP_007866770.1|	-	0.00055	19.7	12.4	0.0017	18.1	8.6	2.0	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
GF_recep_IV	PF14843.1	gi|479326713|ref|YP_007866770.1|	-	0.0017	17.9	4.8	0.002	17.7	3.3	1.1	1	0	0	1	1	1	1	Growth	factor	receptor	domain	IV
Fer4_16	PF13484.1	gi|479326713|ref|YP_007866770.1|	-	0.0026	18.4	8.3	0.016	15.9	0.3	2.3	2	1	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Fer4_3	PF12798.2	gi|479326713|ref|YP_007866770.1|	-	0.0031	17.9	17.0	0.016	15.7	2.9	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|479326713|ref|YP_007866770.1|	-	0.0039	17.4	10.5	1.1	9.6	7.9	2.3	1	1	1	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|479326713|ref|YP_007866770.1|	-	0.16	12.3	2.3	0.16	12.3	1.6	2.5	2	1	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.1	gi|479326713|ref|YP_007866770.1|	-	0.49	10.8	14.1	0.16	12.4	3.0	2.6	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
A2L_zn_ribbon	PF08792.5	gi|479326713|ref|YP_007866770.1|	-	3.8	7.0	6.3	1.2	8.7	0.9	2.2	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
DAO	PF01266.19	gi|479326714|ref|YP_007866771.1|	-	1.4e-20	73.4	1.9	7.4e-12	44.8	0.1	2.4	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
FAD_oxidored	PF12831.2	gi|479326714|ref|YP_007866771.1|	-	6.5e-12	45.2	0.4	1e-11	44.6	0.3	1.2	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
HI0933_like	PF03486.9	gi|479326714|ref|YP_007866771.1|	-	7.7e-12	44.3	3.0	1.2e-07	30.5	0.4	2.3	2	0	0	2	2	2	2	HI0933-like	protein
Pyr_redox_3	PF13738.1	gi|479326714|ref|YP_007866771.1|	-	2.4e-11	44.0	0.0	9.6e-11	42.1	0.0	1.9	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|479326714|ref|YP_007866771.1|	-	8.5e-10	38.0	0.3	8.5e-10	38.0	0.2	1.7	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
Pyr_redox_2	PF07992.9	gi|479326714|ref|YP_007866771.1|	-	8.6e-10	38.8	2.1	2.5e-09	37.3	1.4	2.0	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.19	gi|479326714|ref|YP_007866771.1|	-	1.9e-07	30.2	1.3	1.9e-07	30.2	0.9	1.9	2	0	0	2	2	2	1	FAD	binding	domain
FAD_binding_3	PF01494.14	gi|479326714|ref|YP_007866771.1|	-	8.3e-07	28.3	4.0	0.00049	19.2	2.6	3.0	2	1	0	2	2	2	1	FAD	binding	domain
Lycopene_cycl	PF05834.7	gi|479326714|ref|YP_007866771.1|	-	2.2e-06	26.8	1.7	6.2e-06	25.3	0.9	1.9	2	1	0	2	2	2	1	Lycopene	cyclase	protein
NAD_binding_8	PF13450.1	gi|479326714|ref|YP_007866771.1|	-	6.6e-06	26.0	0.2	1.4e-05	24.9	0.1	1.6	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.12	gi|479326714|ref|YP_007866771.1|	-	1.1e-05	24.6	0.1	2.1e-05	23.7	0.1	1.4	1	0	0	1	1	1	1	Thi4	family
Pyr_redox	PF00070.22	gi|479326714|ref|YP_007866771.1|	-	3.1e-05	24.2	2.0	0.0031	17.8	0.1	2.6	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_9	PF13454.1	gi|479326714|ref|YP_007866771.1|	-	0.0048	16.6	3.0	0.11	12.2	0.2	2.5	2	1	0	2	2	2	1	FAD-NAD(P)-binding
AlaDh_PNT_C	PF01262.16	gi|479326714|ref|YP_007866771.1|	-	0.043	13.3	0.0	0.082	12.4	0.0	1.5	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
3HCDH_N	PF02737.13	gi|479326714|ref|YP_007866771.1|	-	0.05	13.2	0.6	0.1	12.2	0.4	1.6	1	1	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
ApbA	PF02558.11	gi|479326714|ref|YP_007866771.1|	-	0.08	12.3	0.0	0.16	11.4	0.0	1.5	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
ETF	PF01012.16	gi|479326715|ref|YP_007866772.1|	-	5.4e-79	263.6	0.0	2.8e-38	131.2	0.1	2.2	2	0	0	2	2	2	2	Electron	transfer	flavoprotein	domain
ETF_alpha	PF00766.14	gi|479326715|ref|YP_007866772.1|	-	5.7e-33	112.4	0.4	1.5e-32	111.0	0.3	1.7	1	0	0	1	1	1	1	Electron	transfer	flavoprotein	FAD-binding	domain
GatB_Yqey	PF02637.13	gi|479326715|ref|YP_007866772.1|	-	0.029	14.0	0.0	0.12	12.0	0.0	1.9	1	1	0	1	1	1	0	GatB	domain
PmbA_TldD	PF01523.11	gi|479326715|ref|YP_007866772.1|	-	0.091	12.0	0.5	0.84	8.8	0.0	2.1	1	1	1	2	2	2	0	Putative	modulator	of	DNA	gyrase
TPP_enzyme_C	PF02775.16	gi|479326716|ref|YP_007866773.1|	-	2e-31	108.6	0.1	3.4e-31	107.9	0.1	1.4	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
PFO_beta_C	PF12367.3	gi|479326716|ref|YP_007866773.1|	-	3.2e-11	43.0	0.5	2.6e-10	40.0	0.1	2.4	2	1	0	2	2	2	1	Pyruvate	ferredoxin	oxidoreductase	beta	subunit	C	terminal
Peptidase_M22	PF00814.20	gi|479326716|ref|YP_007866773.1|	-	0.081	12.4	0.1	0.26	10.7	0.0	1.7	1	1	0	1	1	1	0	Glycoprotease	family
nlz1	PF12402.3	gi|479326716|ref|YP_007866773.1|	-	0.12	12.7	0.0	0.3	11.4	0.0	1.7	1	0	0	1	1	1	0	NocA-like	zinc-finger	protein	1
POR_N	PF01855.14	gi|479326717|ref|YP_007866774.1|	-	3.9e-63	213.0	0.1	6.1e-63	212.4	0.1	1.3	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
POR	PF01558.13	gi|479326717|ref|YP_007866774.1|	-	3e-30	105.3	0.5	3.3e-29	102.0	0.2	2.4	2	0	0	2	2	2	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
Transketolase_C	PF02780.15	gi|479326717|ref|YP_007866774.1|	-	2.9e-07	30.4	0.0	3.4e-06	27.0	0.0	2.7	3	1	0	3	3	3	1	Transketolase,	C-terminal	domain
TPP_enzyme_N	PF02776.13	gi|479326717|ref|YP_007866774.1|	-	4.6e-06	26.2	1.4	6.2e-05	22.5	1.0	2.7	2	1	1	3	3	3	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TRAPPC9-Trs120	PF08626.6	gi|479326717|ref|YP_007866774.1|	-	0.026	11.8	1.2	0.035	11.4	0.8	1.1	1	0	0	1	1	1	0	Transport	protein	Trs120	or	TRAPPC9,	TRAPP	II	complex	subunit
Chlorovi_GP_rpt	PF06598.6	gi|479326717|ref|YP_007866774.1|	-	7.1	6.5	6.9	23	4.9	0.5	3.3	3	0	0	3	3	3	0	Chlorovirus	glycoprotein	repeat
Acetyltransf_1	PF00583.19	gi|479326719|ref|YP_007866776.1|	-	9.1e-12	44.8	0.0	1.6e-11	44.0	0.0	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.1	gi|479326719|ref|YP_007866776.1|	-	4.8e-10	39.5	0.0	5.8e-10	39.3	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.1	gi|479326719|ref|YP_007866776.1|	-	9.4e-09	35.5	0.0	1.2e-08	35.2	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|479326719|ref|YP_007866776.1|	-	6.2e-08	32.7	0.1	8.2e-08	32.3	0.1	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_7	PF13508.1	gi|479326719|ref|YP_007866776.1|	-	2.7e-05	24.2	0.0	4.7e-05	23.4	0.0	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|479326719|ref|YP_007866776.1|	-	0.001	18.7	0.0	0.0023	17.6	0.0	1.6	1	1	1	2	2	2	1	FR47-like	protein
Acetyltransf_6	PF13480.1	gi|479326719|ref|YP_007866776.1|	-	0.0056	16.6	0.0	0.013	15.4	0.0	1.6	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|479326719|ref|YP_007866776.1|	-	0.0091	15.8	0.1	0.12	12.2	0.1	2.4	1	1	1	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.1	gi|479326719|ref|YP_007866776.1|	-	0.011	15.6	0.0	0.02	14.7	0.0	1.6	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
Acetyltransf_CG	PF14542.1	gi|479326719|ref|YP_007866776.1|	-	0.029	14.2	0.0	0.048	13.5	0.0	1.4	1	0	0	1	1	1	0	GCN5-related	N-acetyl-transferase
SP_C-Propep	PF08999.5	gi|479326720|ref|YP_007866777.1|	-	0.59	9.6	3.5	0.95	8.9	2.5	1.3	1	0	0	1	1	1	0	Surfactant	protein	C,	N	terminal	propeptide
FmdA_AmdA	PF03069.10	gi|479326721|ref|YP_007866778.1|	-	8.2e-66	222.1	0.1	8.8e-37	126.6	0.1	2.2	1	1	1	2	2	2	2	Acetamidase/Formamidase	family
AMP-binding	PF00501.23	gi|479326722|ref|YP_007866779.1|	-	3.8e-75	252.8	0.0	4.5e-75	252.6	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|479326722|ref|YP_007866779.1|	-	5.2e-15	56.1	0.0	1.2e-14	55.0	0.0	1.7	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
DUF871	PF05913.6	gi|479326723|ref|YP_007866780.1|	-	4.4e-06	25.7	0.1	4.4e-06	25.7	0.1	1.0	1	0	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF871)
DUF1059	PF06348.6	gi|479326725|ref|YP_007866782.1|	-	2.4e-55	184.1	0.4	5.7e-27	93.3	0.0	2.0	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF1059)
Zn-ribbon_8	PF09723.5	gi|479326725|ref|YP_007866782.1|	-	0.019	14.9	1.5	0.092	12.7	0.1	2.2	2	0	0	2	2	2	0	Zinc	ribbon	domain
IF2_N	PF04760.10	gi|479326725|ref|YP_007866782.1|	-	0.12	11.9	1.7	0.27	10.9	0.2	2.1	2	1	1	3	3	3	0	Translation	initiation	factor	IF-2,	N-terminal	region
PqqA	PF08042.6	gi|479326725|ref|YP_007866782.1|	-	0.57	9.9	2.4	19	5.0	0.1	2.4	2	0	0	2	2	2	0	PqqA	family
DUF1059	PF06348.6	gi|479326726|ref|YP_007866783.1|	-	4.4e-25	87.2	2.2	4.9e-25	87.1	1.5	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1059)
WaaY	PF06176.6	gi|479326726|ref|YP_007866783.1|	-	0.022	13.9	0.6	0.025	13.8	0.4	1.1	1	0	0	1	1	1	0	Lipopolysaccharide	core	biosynthesis	protein	(WaaY)
IF2_N	PF04760.10	gi|479326726|ref|YP_007866783.1|	-	0.079	12.6	2.2	0.29	10.8	1.8	1.7	1	1	1	2	2	2	0	Translation	initiation	factor	IF-2,	N-terminal	region
HTH_24	PF13412.1	gi|479326727|ref|YP_007866784.1|	-	1.8e-21	75.2	7.5	2.4e-14	52.4	0.4	2.3	2	0	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|479326727|ref|YP_007866784.1|	-	3.1e-16	58.6	0.2	3.1e-09	36.2	0.0	2.6	3	0	0	3	3	3	2	AsnC-type	helix-turn-helix	domain
HTH_11	PF08279.7	gi|479326727|ref|YP_007866784.1|	-	6.6e-08	32.0	1.2	7.5e-06	25.5	0.2	2.4	2	0	0	2	2	2	1	HTH	domain
HTH_Mga	PF08280.6	gi|479326727|ref|YP_007866784.1|	-	5.7e-07	29.1	0.7	0.0053	16.4	0.1	2.7	2	0	0	2	2	2	2	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
MarR	PF01047.17	gi|479326727|ref|YP_007866784.1|	-	2.5e-06	27.0	0.5	0.037	13.7	0.1	2.4	2	0	0	2	2	2	2	MarR	family
HTH_34	PF13601.1	gi|479326727|ref|YP_007866784.1|	-	7.4e-05	22.6	0.1	0.56	10.2	0.0	2.5	2	0	0	2	2	2	2	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|479326727|ref|YP_007866784.1|	-	0.0001	21.8	0.1	0.049	13.2	0.0	2.2	2	0	0	2	2	2	1	MarR	family
Rrf2	PF02082.15	gi|479326727|ref|YP_007866784.1|	-	0.00017	21.6	0.1	0.002	18.1	0.0	2.2	2	0	0	2	2	2	1	Transcriptional	regulator
HTH_28	PF13518.1	gi|479326727|ref|YP_007866784.1|	-	0.00023	21.0	0.0	0.2	11.6	0.0	2.4	2	0	0	2	2	2	2	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|479326727|ref|YP_007866784.1|	-	0.00052	19.6	1.0	0.28	10.8	0.2	2.4	2	0	0	2	2	2	2	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|479326727|ref|YP_007866784.1|	-	0.0015	18.3	0.0	2.3	8.1	0.0	2.3	2	0	0	2	2	2	2	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|479326727|ref|YP_007866784.1|	-	0.0024	17.4	0.1	1.1	9.0	0.0	2.5	2	0	0	2	2	2	1	Homeodomain-like	domain
TrmB	PF01978.14	gi|479326727|ref|YP_007866784.1|	-	0.0027	17.3	0.2	0.78	9.4	0.1	2.4	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_45	PF14947.1	gi|479326727|ref|YP_007866784.1|	-	0.0043	16.8	1.2	0.042	13.6	0.1	2.6	2	0	0	2	2	2	1	Winged	helix-turn-helix
HTH_27	PF13463.1	gi|479326727|ref|YP_007866784.1|	-	0.0046	17.2	0.1	3.7	7.9	0.0	2.3	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
B-block_TFIIIC	PF04182.7	gi|479326727|ref|YP_007866784.1|	-	0.0071	16.1	3.9	0.66	9.8	0.2	3.3	3	0	0	3	3	3	1	B-block	binding	subunit	of	TFIIIC
HTH_9	PF08221.6	gi|479326727|ref|YP_007866784.1|	-	0.0081	16.0	0.5	0.5	10.2	0.1	2.3	2	0	0	2	2	2	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
HTH_39	PF14090.1	gi|479326727|ref|YP_007866784.1|	-	0.012	15.0	0.2	1.8	8.1	0.0	2.4	2	0	0	2	2	2	0	Helix-turn-helix	domain
EAP30	PF04157.11	gi|479326727|ref|YP_007866784.1|	-	0.023	13.8	0.0	0.054	12.6	0.0	1.6	2	0	0	2	2	2	0	EAP30/Vps36	family
HTH_Crp_2	PF13545.1	gi|479326727|ref|YP_007866784.1|	-	0.036	13.8	0.1	4	7.3	0.1	2.3	2	0	0	2	2	2	0	Crp-like	helix-turn-helix	domain
LexA_DNA_bind	PF01726.11	gi|479326727|ref|YP_007866784.1|	-	0.062	12.8	0.3	0.33	10.5	0.1	2.0	2	0	0	2	2	2	0	LexA	DNA	binding	domain
Sigma70_r4_2	PF08281.7	gi|479326727|ref|YP_007866784.1|	-	0.064	12.7	0.1	3.5	7.1	0.0	2.4	2	0	0	2	2	2	0	Sigma-70,	region	4
Put_DNA-bind_N	PF06971.8	gi|479326727|ref|YP_007866784.1|	-	0.065	12.9	1.1	0.31	10.8	0.5	2.1	2	0	0	2	2	2	0	Putative	DNA-binding	protein	N-terminus
HTH_10	PF04967.7	gi|479326727|ref|YP_007866784.1|	-	0.076	12.6	0.1	1.1	8.9	0.0	2.3	2	0	0	2	2	2	0	HTH	DNA	binding	domain
Sigma70_ECF	PF07638.6	gi|479326727|ref|YP_007866784.1|	-	0.084	12.5	0.0	0.14	11.7	0.0	1.3	1	0	0	1	1	1	0	ECF	sigma	factor
HTH_DeoR	PF08220.7	gi|479326727|ref|YP_007866784.1|	-	0.12	11.9	0.1	6.1	6.4	0.1	2.2	2	0	0	2	2	2	0	DeoR-like	helix-turn-helix	domain
zf-C2H2_jaz	PF12171.3	gi|479326728|ref|YP_007866785.1|	-	0.02	15.0	1.2	0.037	14.1	0.9	1.4	1	0	0	1	1	1	0	Zinc-finger	double-stranded	RNA-binding
Fer4_7	PF12838.2	gi|479326729|ref|YP_007866786.1|	-	4.4e-08	33.3	3.6	0.0012	19.1	0.0	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|479326729|ref|YP_007866786.1|	-	4.4e-08	32.7	4.6	8.4e-08	31.8	3.2	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|479326729|ref|YP_007866786.1|	-	7.2e-07	29.3	7.0	1.9e-06	28.0	4.9	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|479326729|ref|YP_007866786.1|	-	0.00025	20.7	8.6	0.026	14.4	2.1	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|479326729|ref|YP_007866786.1|	-	0.00039	20.7	1.9	0.26	11.6	0.0	2.7	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|479326729|ref|YP_007866786.1|	-	0.00068	20.3	3.1	0.14	12.8	0.0	2.5	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_8	PF13183.1	gi|479326729|ref|YP_007866786.1|	-	0.0012	18.8	8.8	0.0048	16.9	4.2	2.9	1	1	1	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|479326729|ref|YP_007866786.1|	-	0.0027	17.5	10.9	0.081	12.8	1.1	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|479326729|ref|YP_007866786.1|	-	0.0035	17.1	3.8	0.0084	15.9	2.7	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_11	PF13247.1	gi|479326729|ref|YP_007866786.1|	-	0.0047	16.7	2.6	0.0099	15.7	1.8	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|479326729|ref|YP_007866786.1|	-	0.014	14.9	0.8	0.014	14.9	0.6	3.1	2	1	0	2	2	2	0	4Fe-4S	binding	domain
DUF3753	PF12575.3	gi|479326729|ref|YP_007866786.1|	-	0.084	12.6	1.4	0.28	11.0	0.2	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3753)
Fer4_4	PF12800.2	gi|479326729|ref|YP_007866786.1|	-	0.18	12.2	8.9	0.97	9.9	1.3	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|479326729|ref|YP_007866786.1|	-	0.38	11.4	14.0	0.086	13.4	1.3	2.8	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_20	PF14691.1	gi|479326729|ref|YP_007866786.1|	-	0.43	10.2	4.7	0.26	10.9	1.2	2.0	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
HMA	PF00403.21	gi|479326731|ref|YP_007866788.1|	-	1e-08	35.1	0.5	7e-08	32.5	0.4	2.1	1	1	0	1	1	1	1	Heavy-metal-associated	domain
ABM	PF03992.11	gi|479326732|ref|YP_007866789.1|	-	1.7e-16	60.0	0.0	1.9e-16	59.8	0.0	1.1	1	0	0	1	1	1	1	Antibiotic	biosynthesis	monooxygenase
SOR	PF07682.6	gi|479326732|ref|YP_007866789.1|	-	0.096	11.2	0.0	0.12	10.9	0.0	1.4	1	1	0	1	1	1	0	Sulphur	oxygenase	reductase
Cytochrom_B_N_2	PF13631.1	gi|479326733|ref|YP_007866790.1|	-	2.5e-55	186.7	9.6	2.5e-55	186.7	6.7	4.1	3	2	1	4	4	4	2	Cytochrome	b(N-terminal)/b6/petB
Cytochrom_B_N	PF00033.14	gi|479326733|ref|YP_007866790.1|	-	8.4e-05	22.0	14.9	8.4e-05	22.0	10.3	3.6	3	1	0	3	3	3	1	Cytochrome	b(N-terminal)/b6/petB
Rieske	PF00355.21	gi|479326734|ref|YP_007866791.1|	-	6.7e-12	44.8	0.3	1.5e-11	43.7	0.2	1.6	1	1	0	1	1	1	1	Rieske	[2Fe-2S]	domain
CytB6-F_Fe-S	PF08802.5	gi|479326734|ref|YP_007866791.1|	-	0.052	13.5	1.1	0.47	10.5	0.0	2.6	2	0	0	2	2	2	0	Cytochrome	B6-F	complex	Fe-S	subunit
EB_dh	PF09459.5	gi|479326736|ref|YP_007866793.1|	-	3.8e-66	223.2	4.1	4.8e-66	222.8	2.9	1.1	1	0	0	1	1	1	1	Ethylbenzene	dehydrogenase
Rifin_STEVOR	PF02009.11	gi|479326736|ref|YP_007866793.1|	-	0.22	11.1	2.1	0.29	10.7	1.5	1.1	1	0	0	1	1	1	0	Rifin/stevor	family
TMEM154	PF15102.1	gi|479326736|ref|YP_007866793.1|	-	8.6	6.0	9.9	15	5.3	6.9	1.2	1	0	0	1	1	1	0	TMEM154	protein	family
DUF3093	PF11292.3	gi|479326737|ref|YP_007866794.1|	-	0.026	14.3	0.0	0.034	13.9	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3093)
DUF2207	PF09972.4	gi|479326737|ref|YP_007866794.1|	-	0.13	10.8	1.1	0.16	10.4	0.8	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
HTH_34	PF13601.1	gi|479326738|ref|YP_007866795.1|	-	0.00023	21.1	0.0	0.00048	20.0	0.0	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_5	PF01022.15	gi|479326738|ref|YP_007866795.1|	-	0.00054	19.5	0.0	0.0012	18.5	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.1	gi|479326738|ref|YP_007866795.1|	-	0.00064	19.0	0.6	0.0014	18.0	0.4	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_45	PF14947.1	gi|479326738|ref|YP_007866795.1|	-	0.3	10.9	6.2	0.077	12.8	1.7	1.9	2	0	0	2	2	2	0	Winged	helix-turn-helix
ADH_N	PF08240.7	gi|479326739|ref|YP_007866796.1|	-	2.1e-28	98.2	0.4	4.1e-28	97.3	0.3	1.5	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|479326739|ref|YP_007866796.1|	-	1.6e-23	82.7	0.1	3.8e-23	81.4	0.0	1.6	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|479326739|ref|YP_007866796.1|	-	3.9e-06	27.7	0.0	7e-06	26.9	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
PALP	PF00291.20	gi|479326739|ref|YP_007866796.1|	-	0.0041	16.3	0.0	0.0065	15.7	0.0	1.3	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
Pyr_redox	PF00070.22	gi|479326739|ref|YP_007866796.1|	-	0.011	16.1	0.2	2.5	8.5	0.1	2.6	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
RmlD_sub_bind	PF04321.12	gi|479326739|ref|YP_007866796.1|	-	0.031	13.1	0.0	0.05	12.4	0.0	1.3	1	0	0	1	1	1	0	RmlD	substrate	binding	domain
NAD_binding_10	PF13460.1	gi|479326739|ref|YP_007866796.1|	-	0.036	14.0	0.0	0.063	13.2	0.0	1.4	1	0	0	1	1	1	0	NADH(P)-binding
Peptidase_C1_2	PF03051.10	gi|479326739|ref|YP_007866796.1|	-	0.095	11.2	0.2	0.13	10.7	0.1	1.1	1	0	0	1	1	1	0	Peptidase	C1-like	family
TrmB	PF01978.14	gi|479326741|ref|YP_007866798.1|	-	0.00038	20.1	0.0	0.0007	19.2	0.0	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
Rrn6	PF10214.4	gi|479326741|ref|YP_007866798.1|	-	0.087	10.9	0.1	0.13	10.3	0.1	1.1	1	0	0	1	1	1	0	RNA	polymerase	I-specific	transcription-initiation	factor
NrfD	PF03916.9	gi|479326742|ref|YP_007866799.1|	-	4.7e-11	42.6	31.8	1.2e-09	38.0	18.1	2.4	2	1	0	2	2	2	2	Polysulphide	reductase,	NrfD
TPR_11	PF13414.1	gi|479326743|ref|YP_007866800.1|	-	2.5e-30	103.9	21.9	2.6e-11	43.0	2.9	4.7	3	2	2	6	6	6	3	TPR	repeat
TPR_19	PF14559.1	gi|479326743|ref|YP_007866800.1|	-	1.5e-25	89.2	8.1	7.8e-07	29.3	0.3	4.3	3	1	1	4	4	4	4	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|479326743|ref|YP_007866800.1|	-	7.1e-21	74.3	7.3	6e-06	26.7	0.1	4.6	3	2	1	4	4	4	4	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|479326743|ref|YP_007866800.1|	-	1.9e-20	71.0	22.9	0.0001	21.9	0.1	8.2	8	1	0	8	8	8	4	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|479326743|ref|YP_007866800.1|	-	5.3e-18	63.6	16.3	0.0018	18.2	1.3	7.4	7	1	1	8	8	8	3	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|479326743|ref|YP_007866800.1|	-	4e-14	52.5	25.6	1e-06	28.7	0.1	4.6	1	1	4	5	5	5	4	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_8	PF13181.1	gi|479326743|ref|YP_007866800.1|	-	2.4e-12	45.6	28.6	0.0042	16.7	0.1	7.9	6	2	2	8	8	8	3	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|479326743|ref|YP_007866800.1|	-	2.5e-12	46.2	2.4	0.038	14.6	0.0	5.8	4	2	3	7	7	6	3	Tetratricopeptide	repeat
TPR_9	PF13371.1	gi|479326743|ref|YP_007866800.1|	-	4.7e-12	45.5	0.3	6e-05	22.8	0.0	4.1	2	1	3	5	5	5	4	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|479326743|ref|YP_007866800.1|	-	9.2e-11	40.8	28.6	0.0019	17.7	0.1	8.3	8	1	0	8	8	8	3	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|479326743|ref|YP_007866800.1|	-	1e-10	41.4	18.9	0.00013	21.8	1.2	5.3	2	2	4	6	6	6	5	Tetratricopeptide	repeat
ChAPs	PF09295.5	gi|479326743|ref|YP_007866800.1|	-	2.6e-07	29.7	1.3	0.0011	17.7	0.0	2.2	1	1	1	2	2	2	2	ChAPs	(Chs5p-Arf1p-binding	proteins)
NARP1	PF12569.3	gi|479326743|ref|YP_007866800.1|	-	1.1e-05	24.4	10.4	0.00046	19.0	0.3	3.6	1	1	3	4	4	4	4	NMDA	receptor-regulated	protein	1
TPR_15	PF13429.1	gi|479326743|ref|YP_007866800.1|	-	3.2e-05	23.1	6.1	0.032	13.2	0.2	3.4	1	1	2	3	3	3	3	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|479326743|ref|YP_007866800.1|	-	0.00013	22.2	13.7	2	9.0	1.0	6.3	7	0	0	7	7	6	1	Tetratricopeptide	repeat
TPR_20	PF14561.1	gi|479326743|ref|YP_007866800.1|	-	0.0014	18.7	4.4	1.8	8.7	0.1	4.0	2	1	3	5	5	5	1	Tetratricopeptide	repeat
Coatomer_E	PF04733.9	gi|479326743|ref|YP_007866800.1|	-	0.0033	16.6	6.0	0.092	11.9	1.1	3.4	1	1	1	2	2	2	1	Coatomer	epsilon	subunit
YfdX	PF10938.3	gi|479326743|ref|YP_007866800.1|	-	0.016	14.8	2.2	1.8	8.1	0.0	3.7	2	2	1	4	4	4	0	YfdX	protein
HrpB1_HrpK	PF09613.5	gi|479326743|ref|YP_007866800.1|	-	0.049	13.1	0.1	0.24	10.8	0.0	2.0	1	1	0	2	2	2	0	Bacterial	type	III	secretion	protein	(HrpB1_HrpK)
Fis1_TPR_C	PF14853.1	gi|479326743|ref|YP_007866800.1|	-	0.068	13.0	16.0	0.46	10.3	2.3	4.5	3	1	2	5	5	4	0	Fis1	C-terminal	tetratricopeptide	repeat
DUF3856	PF12968.2	gi|479326743|ref|YP_007866800.1|	-	0.28	10.9	2.8	2	8.2	0.1	3.4	3	1	0	3	3	3	0	Domain	of	Unknown	Function	(DUF3856)
TPR_7	PF13176.1	gi|479326743|ref|YP_007866800.1|	-	2.1	8.3	10.5	76	3.4	0.0	5.5	7	0	0	7	7	6	0	Tetratricopeptide	repeat
MIT	PF04212.13	gi|479326743|ref|YP_007866800.1|	-	2.3	8.1	11.6	1.8	8.4	0.0	5.1	5	3	1	6	6	6	0	MIT	(microtubule	interacting	and	transport)	domain
Molybdopterin	PF00384.17	gi|479326744|ref|YP_007866801.1|	-	2.1e-06	26.7	0.0	0.14	10.8	0.0	3.7	3	1	0	3	3	3	3	Molybdopterin	oxidoreductase
TAT_signal	PF10518.4	gi|479326744|ref|YP_007866801.1|	-	0.00042	20.0	0.3	0.0013	18.5	0.2	1.9	1	0	0	1	1	1	1	TAT	(twin-arginine	translocation)	pathway	signal	sequence
Molybdop_Fe4S4	PF04879.11	gi|479326744|ref|YP_007866801.1|	-	0.047	13.5	0.2	0.11	12.3	0.1	1.6	1	0	0	1	1	1	0	Molybdopterin	oxidoreductase	Fe4S4	domain
Fer4_11	PF13247.1	gi|479326745|ref|YP_007866802.1|	-	3.7e-23	81.2	7.2	3.7e-23	81.2	5.0	1.9	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|479326745|ref|YP_007866802.1|	-	1.2e-14	54.2	16.7	5.9e-08	32.8	4.4	2.7	2	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|479326745|ref|YP_007866802.1|	-	5e-11	42.8	18.3	3.4e-05	24.1	4.1	2.8	2	1	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|479326745|ref|YP_007866802.1|	-	2.3e-08	33.7	17.4	0.00039	20.1	2.7	2.9	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|479326745|ref|YP_007866802.1|	-	1.5e-05	24.5	26.0	0.0024	17.6	0.6	4.6	5	0	0	5	5	4	3	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|479326745|ref|YP_007866802.1|	-	9.5e-05	22.7	9.2	0.5	10.8	0.1	3.6	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|479326745|ref|YP_007866802.1|	-	0.00013	21.8	17.3	0.00076	19.4	3.8	3.2	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|479326745|ref|YP_007866802.1|	-	0.0012	18.4	24.4	0.039	13.5	0.5	4.3	4	0	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|479326745|ref|YP_007866802.1|	-	0.0024	18.0	28.7	0.1	13.0	1.1	4.8	5	0	0	5	5	5	3	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|479326745|ref|YP_007866802.1|	-	0.0041	17.5	33.8	0.57	10.8	4.8	4.3	4	0	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|479326745|ref|YP_007866802.1|	-	0.0063	16.8	18.1	0.09	13.1	0.1	3.7	2	1	3	5	5	5	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|479326745|ref|YP_007866802.1|	-	0.26	11.1	21.4	0.35	10.7	0.5	3.6	2	1	2	4	4	4	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|479326745|ref|YP_007866802.1|	-	3.2	8.3	16.5	0.36	11.4	1.2	3.3	3	0	0	3	3	3	0	4Fe-4S	single	cluster	domain
Nitrate_red_del	PF02613.10	gi|479326746|ref|YP_007866803.1|	-	1.7e-08	34.3	0.0	2.4e-08	33.8	0.0	1.3	1	0	0	1	1	1	1	Nitrate	reductase	delta	subunit
Fer4_7	PF12838.2	gi|479326747|ref|YP_007866804.1|	-	1.1e-06	28.9	19.5	0.003	17.8	0.8	3.6	4	0	0	4	4	3	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|479326747|ref|YP_007866804.1|	-	2.9e-05	23.7	23.9	0.00046	19.9	6.1	3.6	3	1	1	4	4	4	3	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|479326747|ref|YP_007866804.1|	-	4.6e-05	22.8	3.7	4.6e-05	22.8	2.6	5.1	6	0	0	6	6	6	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|479326747|ref|YP_007866804.1|	-	7.1e-05	22.9	22.4	0.013	15.7	4.2	4.0	3	2	1	4	4	4	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|479326747|ref|YP_007866804.1|	-	9.2e-05	22.1	23.4	0.00046	19.9	2.9	4.1	4	0	0	4	4	4	2	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|479326747|ref|YP_007866804.1|	-	0.00014	22.3	11.5	0.097	13.2	0.6	4.5	4	0	0	4	4	4	2	4Fe-4S	single	cluster	domain
Fer4_21	PF14697.1	gi|479326747|ref|YP_007866804.1|	-	0.00025	20.8	6.3	0.00025	20.8	4.3	2.9	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|479326747|ref|YP_007866804.1|	-	0.00032	20.4	1.8	0.00032	20.4	1.3	4.8	6	0	0	6	6	5	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|479326747|ref|YP_007866804.1|	-	0.0017	18.6	14.4	0.12	12.7	0.1	4.0	3	2	1	4	4	4	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|479326747|ref|YP_007866804.1|	-	0.0099	16.2	10.8	0.19	12.1	0.2	3.3	4	0	0	4	4	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|479326747|ref|YP_007866804.1|	-	0.019	14.9	16.8	0.091	12.8	6.4	3.6	2	1	2	4	4	4	0	4Fe-4S	dicluster	domain
Fer4_19	PF06902.6	gi|479326747|ref|YP_007866804.1|	-	0.095	12.5	4.8	8.2	6.3	0.1	3.7	3	0	0	3	3	3	0	Divergent	4Fe-4S	mono-cluster
ProRS-C_1	PF09180.6	gi|479326747|ref|YP_007866804.1|	-	7.9	6.4	13.5	0.09	12.7	0.6	3.5	3	1	1	4	4	4	0	Prolyl-tRNA	synthetase,	C-terminal
HAD_2	PF13419.1	gi|479326748|ref|YP_007866805.1|	-	2.8e-06	27.6	0.0	3.4e-06	27.4	0.0	1.2	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
DUF2299	PF10061.4	gi|479326749|ref|YP_007866806.1|	-	4.6e-44	149.2	0.1	5.2e-44	149.0	0.1	1.0	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2299)
tRNA_int_endo	PF01974.12	gi|479326749|ref|YP_007866806.1|	-	0.086	12.6	0.0	0.14	12.0	0.0	1.3	1	0	0	1	1	1	0	tRNA	intron	endonuclease,	catalytic	C-terminal	domain
Phosphoesterase	PF04185.9	gi|479326750|ref|YP_007866807.1|	-	1.8e-77	261.0	4.7	5.6e-77	259.4	3.2	1.7	1	1	0	1	1	1	1	Phosphoesterase	family
Cauli_VI	PF01693.11	gi|479326751|ref|YP_007866808.1|	-	0.017	15.1	0.0	0.02	14.8	0.0	1.2	1	0	0	1	1	1	0	Caulimovirus	viroplasmin
SSV1_ORF_D-335	PF07935.6	gi|479326753|ref|YP_007866810.1|	-	3.3e-25	87.6	1.9	4.1e-25	87.3	1.3	1.1	1	0	0	1	1	1	1	ORF	D-335-like	protein
NfeD	PF01957.13	gi|479326755|ref|YP_007866812.1|	-	4.4	7.4	9.3	0.54	10.3	3.0	1.8	1	1	1	2	2	2	0	NfeD-like	C-terminal,	partner-binding
AAA_14	PF13173.1	gi|479326758|ref|YP_007866815.1|	-	1.1e-30	106.1	1.8	4.1e-30	104.3	0.0	2.5	3	0	0	3	3	3	1	AAA	domain
DUF4143	PF13635.1	gi|479326758|ref|YP_007866815.1|	-	3.1e-13	49.6	0.2	5.7e-13	48.8	0.1	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
AAA_17	PF13207.1	gi|479326758|ref|YP_007866815.1|	-	0.0068	17.2	2.4	0.024	15.4	0.5	2.7	2	1	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|479326758|ref|YP_007866815.1|	-	0.026	14.6	0.0	1	9.4	0.0	2.6	1	1	0	1	1	1	0	AAA	domain
AAA_16	PF13191.1	gi|479326758|ref|YP_007866815.1|	-	0.075	13.0	0.0	0.94	9.4	0.0	2.2	1	1	1	2	2	2	0	AAA	ATPase	domain
MS_channel	PF00924.13	gi|479326759|ref|YP_007866816.1|	-	8.5e-18	64.4	7.8	8.5e-18	64.4	5.4	1.9	2	0	0	2	2	2	1	Mechanosensitive	ion	channel
Ndc1_Nup	PF09531.5	gi|479326759|ref|YP_007866816.1|	-	0.1	11.0	3.7	0.13	10.6	2.6	1.1	1	0	0	1	1	1	0	Nucleoporin	protein	Ndc1-Nup
Gly-zipper_OmpA	PF13436.1	gi|479326759|ref|YP_007866816.1|	-	0.16	11.6	12.6	0.32	10.6	8.7	1.4	1	0	0	1	1	1	0	Glycine-zipper	containing	OmpA-like	membrane	domain
CopD	PF05425.8	gi|479326759|ref|YP_007866816.1|	-	1.8	8.8	11.8	0.57	10.4	6.1	1.6	1	1	1	2	2	2	0	Copper	resistance	protein	D
DUF4117	PF13491.1	gi|479326759|ref|YP_007866816.1|	-	3.1	7.2	13.8	0.82	9.0	6.8	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4117)
SNARE_assoc	PF09335.6	gi|479326760|ref|YP_007866817.1|	-	5.3e-22	78.3	6.7	5.3e-22	78.3	4.6	1.9	2	0	0	2	2	2	1	SNARE	associated	Golgi	protein
DUF1206	PF06724.6	gi|479326760|ref|YP_007866817.1|	-	0.06	13.1	0.5	0.06	13.1	0.4	2.2	2	0	0	2	2	2	0	Domain	of	Unknown	Function	(DUF1206)
Selenoprotein_S	PF06936.6	gi|479326760|ref|YP_007866817.1|	-	1.2	8.6	3.9	0.51	9.8	0.8	1.8	2	0	0	2	2	2	0	Selenoprotein	S	(SelS)
Cad	PF03596.8	gi|479326760|ref|YP_007866817.1|	-	8.5	6.0	14.8	0.11	12.1	4.1	2.1	2	1	0	2	2	2	0	Cadmium	resistance	transporter
DIM1	PF02966.11	gi|479326761|ref|YP_007866818.1|	-	0.021	14.3	0.2	0.039	13.4	0.2	1.5	1	1	0	1	1	1	0	Mitosis	protein	DIM1
DUF1296	PF06972.6	gi|479326761|ref|YP_007866818.1|	-	0.062	13.2	0.3	0.53	10.2	0.0	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1296)
Antitoxin-MazE	PF04014.13	gi|479326762|ref|YP_007866819.1|	-	8.2e-05	22.2	1.4	0.00013	21.6	0.9	1.4	1	1	0	1	1	1	1	Antidote-toxin	recognition	MazE
MraZ	PF02381.13	gi|479326762|ref|YP_007866819.1|	-	0.00022	20.9	0.0	0.00023	20.8	0.0	1.2	1	0	0	1	1	1	1	MraZ	protein
DUF2375	PF09558.5	gi|479326762|ref|YP_007866819.1|	-	0.083	12.7	0.1	0.2	11.4	0.0	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2375)
Transket_pyr	PF02779.19	gi|479326763|ref|YP_007866820.1|	-	1e-43	148.9	0.1	1.7e-43	148.1	0.0	1.3	1	0	0	1	1	1	1	Transketolase,	pyrimidine	binding	domain
Transketolase_C	PF02780.15	gi|479326763|ref|YP_007866820.1|	-	1.2e-35	122.0	0.1	1e-34	119.1	0.0	2.1	2	0	0	2	2	2	1	Transketolase,	C-terminal	domain
E1_dh	PF00676.15	gi|479326764|ref|YP_007866821.1|	-	5.6e-77	258.4	0.0	6.6e-77	258.1	0.0	1.1	1	0	0	1	1	1	1	Dehydrogenase	E1	component
DXP_synthase_N	PF13292.1	gi|479326764|ref|YP_007866821.1|	-	3.9e-09	35.8	0.0	7.6e-09	34.8	0.0	1.4	2	0	0	2	2	2	1	1-deoxy-D-xylulose-5-phosphate	synthase
TPP_enzyme_C	PF02775.16	gi|479326764|ref|YP_007866821.1|	-	2.7e-06	27.0	0.1	8e-06	25.5	0.1	1.8	1	1	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
Aldo_ket_red	PF00248.16	gi|479326765|ref|YP_007866822.1|	-	4.6e-68	229.0	0.0	5.3e-68	228.8	0.0	1.0	1	0	0	1	1	1	1	Aldo/keto	reductase	family
Usp	PF00582.21	gi|479326766|ref|YP_007866823.1|	-	1.9e-38	131.8	0.2	2.1e-38	131.6	0.1	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
Sigma_reg_C	PF13791.1	gi|479326766|ref|YP_007866823.1|	-	0.016	15.2	0.3	0.02	14.9	0.2	1.1	1	0	0	1	1	1	0	Sigma	factor	regulator	C-terminal
Redoxin	PF08534.5	gi|479326766|ref|YP_007866823.1|	-	0.097	12.2	0.1	0.35	10.4	0.0	1.8	2	0	0	2	2	2	0	Redoxin
GARS_N	PF02844.10	gi|479326766|ref|YP_007866823.1|	-	0.11	13.0	0.3	0.57	10.6	0.1	2.1	1	1	1	2	2	2	0	Phosphoribosylglycinamide	synthetase,	N	domain
F_bP_aldolase	PF01116.15	gi|479326766|ref|YP_007866823.1|	-	0.12	11.5	0.1	0.49	9.4	0.1	1.8	1	1	1	2	2	2	0	Fructose-bisphosphate	aldolase	class-II
Aida_N	PF08910.5	gi|479326767|ref|YP_007866824.1|	-	0.094	12.9	0.1	0.15	12.3	0.0	1.4	1	1	0	1	1	1	0	Aida	N-terminus
DAO	PF01266.19	gi|479326768|ref|YP_007866825.1|	-	2.7e-14	52.8	1.1	2.8e-06	26.5	0.0	2.5	1	1	1	2	2	2	2	FAD	dependent	oxidoreductase
FAD_oxidored	PF12831.2	gi|479326768|ref|YP_007866825.1|	-	1.6e-13	50.5	0.0	2.1e-13	50.1	0.0	1.1	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|479326768|ref|YP_007866825.1|	-	5.9e-10	38.5	0.2	8.7e-10	38.0	0.1	1.2	1	0	0	1	1	1	1	FAD	binding	domain
HI0933_like	PF03486.9	gi|479326768|ref|YP_007866825.1|	-	3.3e-07	29.1	0.7	5.1e-06	25.2	0.5	2.2	1	1	0	1	1	1	1	HI0933-like	protein
Trp_halogenase	PF04820.9	gi|479326768|ref|YP_007866825.1|	-	4.2e-07	28.9	1.1	0.00048	18.8	0.0	3.0	2	1	1	3	3	3	1	Tryptophan	halogenase
Lycopene_cycl	PF05834.7	gi|479326768|ref|YP_007866825.1|	-	9.5e-07	28.0	0.0	1.5e-06	27.4	0.0	1.2	1	0	0	1	1	1	1	Lycopene	cyclase	protein
Thi4	PF01946.12	gi|479326768|ref|YP_007866825.1|	-	2.9e-06	26.5	0.3	1.7e-05	24.0	0.2	2.0	1	1	0	1	1	1	1	Thi4	family
Pyr_redox_3	PF13738.1	gi|479326768|ref|YP_007866825.1|	-	5.5e-06	26.5	0.0	1.1e-05	25.6	0.0	1.5	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.9	gi|479326768|ref|YP_007866825.1|	-	1e-05	25.5	0.0	2.6e-05	24.1	0.0	1.7	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|479326768|ref|YP_007866825.1|	-	7.9e-05	21.8	0.1	0.00025	20.2	0.1	1.7	1	1	0	1	1	1	1	FAD	binding	domain
NAD_binding_8	PF13450.1	gi|479326768|ref|YP_007866825.1|	-	0.00036	20.4	0.5	0.0012	18.8	0.2	2.0	2	0	0	2	2	1	1	NAD(P)-binding	Rossmann-like	domain
GIDA	PF01134.17	gi|479326768|ref|YP_007866825.1|	-	0.0011	17.9	0.4	0.0019	17.1	0.3	1.4	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
Pyr_redox	PF00070.22	gi|479326768|ref|YP_007866825.1|	-	0.014	15.7	2.7	0.13	12.6	0.2	3.0	3	0	0	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
AlaDh_PNT_C	PF01262.16	gi|479326768|ref|YP_007866825.1|	-	0.15	11.6	1.9	0.21	11.1	0.1	2.1	3	0	0	3	3	3	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
Fer4_7	PF12838.2	gi|479326769|ref|YP_007866826.1|	-	1.7e-09	37.9	24.9	4.2e-05	23.8	6.2	2.2	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_11	PF13247.1	gi|479326769|ref|YP_007866826.1|	-	2.5e-08	33.6	1.2	3e-08	33.4	0.8	1.1	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|479326769|ref|YP_007866826.1|	-	9.9e-08	32.1	7.0	1.4e-07	31.6	4.8	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|479326769|ref|YP_007866826.1|	-	1.8e-07	30.8	7.0	2.3e-07	30.4	4.9	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|479326769|ref|YP_007866826.1|	-	7.8e-06	25.5	11.4	0.00075	19.2	1.9	2.8	2	1	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|479326769|ref|YP_007866826.1|	-	1e-05	25.2	2.8	0.017	14.9	0.5	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|479326769|ref|YP_007866826.1|	-	4.9e-05	23.2	2.4	0.16	11.9	0.3	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|479326769|ref|YP_007866826.1|	-	9e-05	22.1	13.5	0.0011	18.7	2.4	2.7	2	1	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|479326769|ref|YP_007866826.1|	-	0.00081	20.0	2.1	0.93	10.2	0.0	2.2	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_20	PF14691.1	gi|479326769|ref|YP_007866826.1|	-	0.0019	17.7	7.2	0.011	15.2	1.4	2.1	1	1	1	2	2	2	2	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_17	PF13534.1	gi|479326769|ref|YP_007866826.1|	-	0.0047	17.2	6.0	0.6	10.4	1.0	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|479326769|ref|YP_007866826.1|	-	0.0066	16.0	14.9	0.033	13.7	1.4	3.9	3	1	0	3	3	3	2	4Fe-4S	binding	domain
ETF_QO	PF05187.8	gi|479326769|ref|YP_007866826.1|	-	0.011	15.7	0.1	0.015	15.2	0.1	1.2	1	0	0	1	1	1	0	Electron	transfer	flavoprotein-ubiquinone	oxidoreductase
Fer4_3	PF12798.2	gi|479326769|ref|YP_007866826.1|	-	0.018	15.6	15.1	0.079	13.5	2.0	2.2	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|479326769|ref|YP_007866826.1|	-	0.16	12.4	3.6	1.9	9.0	0.3	2.2	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|479326769|ref|YP_007866826.1|	-	0.19	12.1	12.9	0.53	10.7	2.1	2.7	2	1	0	2	2	2	0	4Fe-4S	binding	domain
Antistasin	PF02822.9	gi|479326769|ref|YP_007866826.1|	-	0.78	10.1	5.3	3.3	8.0	0.5	2.5	2	1	0	2	2	2	0	Antistasin	family
Glycos_transf_1	PF00534.15	gi|479326770|ref|YP_007866827.1|	-	1.6e-31	109.0	0.3	1.6e-31	109.0	0.2	1.9	3	0	0	3	3	3	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|479326770|ref|YP_007866827.1|	-	1.8e-17	63.6	2.6	2.8e-17	63.0	1.8	1.3	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_1_4	PF13692.1	gi|479326770|ref|YP_007866827.1|	-	1.2e-12	48.1	0.0	2.3e-12	47.2	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|479326770|ref|YP_007866827.1|	-	2.1e-10	40.7	0.0	6.4e-10	39.1	0.0	1.8	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.1	gi|479326770|ref|YP_007866827.1|	-	2.8e-06	27.5	0.0	7.8e-06	26.1	0.0	1.7	1	1	0	1	1	1	1	Glycosyl	transferase	4-like	domain
TPP_enzyme_N	PF02776.13	gi|479326771|ref|YP_007866828.1|	-	8.8e-48	162.0	0.0	1.2e-45	155.0	0.0	2.3	2	0	0	2	2	2	2	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|479326771|ref|YP_007866828.1|	-	2.4e-33	114.8	0.1	1.3e-32	112.4	0.0	2.1	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.17	gi|479326771|ref|YP_007866828.1|	-	1.4e-20	73.4	0.0	3.7e-20	72.0	0.0	1.7	1	1	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
CW_binding_2	PF04122.7	gi|479326771|ref|YP_007866828.1|	-	0.00097	19.2	0.0	1.2	9.3	0.0	2.8	3	0	0	3	3	3	2	Putative	cell	wall	binding	repeat	2
PB1	PF00564.19	gi|479326771|ref|YP_007866828.1|	-	0.071	12.7	0.1	0.29	10.8	0.0	2.1	2	0	0	2	2	2	0	PB1	domain
FAA_hydrolase	PF01557.13	gi|479326772|ref|YP_007866829.1|	-	2.1e-68	230.0	0.0	2.6e-68	229.7	0.0	1.1	1	0	0	1	1	1	1	Fumarylacetoacetate	(FAA)	hydrolase	family
UPF0016	PF01169.14	gi|479326773|ref|YP_007866830.1|	-	1.5	9.0	14.3	3.2	7.9	2.4	2.4	2	1	0	2	2	2	0	Uncharacterized	protein	family	UPF0016
YesK	PF14150.1	gi|479326773|ref|YP_007866830.1|	-	7.5	6.7	16.4	2.8	8.1	2.5	3.3	4	1	0	4	4	4	0	YesK-like	protein
Amidohydro_3	PF07969.6	gi|479326774|ref|YP_007866831.1|	-	5.8e-26	91.6	0.0	6.5e-25	88.1	0.0	2.0	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|479326774|ref|YP_007866831.1|	-	9.3e-13	48.8	0.0	1.2e-12	48.4	0.0	1.1	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_5	PF13594.1	gi|479326774|ref|YP_007866831.1|	-	7.8e-06	25.6	0.0	3.6e-05	23.4	0.0	2.2	2	0	0	2	2	2	1	Amidohydrolase
MS_channel	PF00924.13	gi|479326775|ref|YP_007866832.1|	-	2.3e-29	102.2	1.1	4.3e-29	101.3	0.8	1.4	1	0	0	1	1	1	1	Mechanosensitive	ion	channel
RseC_MucC	PF04246.7	gi|479326776|ref|YP_007866833.1|	-	1.3	8.5	3.4	2.4	7.7	2.4	1.4	1	0	0	1	1	1	0	Positive	regulator	of	sigma(E),	RseC/MucC
CCSMST1	PF15013.1	gi|479326776|ref|YP_007866833.1|	-	1.9	8.4	5.2	21	5.1	3.4	2.4	2	1	0	2	2	2	0	CCSMST1	family
FCH	PF00611.18	gi|479326777|ref|YP_007866834.1|	-	0.00077	19.5	2.0	0.00077	19.5	1.4	3.1	3	1	0	3	3	2	1	Fes/CIP4,	and	EFC/F-BAR	homology	domain
AIP3	PF03915.8	gi|479326777|ref|YP_007866834.1|	-	0.0014	17.6	13.1	0.0021	17.0	8.5	1.7	1	1	0	1	1	1	1	Actin	interacting	protein	3
Spectrin	PF00435.16	gi|479326777|ref|YP_007866834.1|	-	0.0031	17.7	6.9	0.1	12.8	0.4	2.5	2	0	0	2	2	2	1	Spectrin	repeat
Fzo_mitofusin	PF04799.8	gi|479326777|ref|YP_007866834.1|	-	0.018	14.3	1.5	0.018	14.3	1.1	2.9	2	1	0	2	2	2	0	fzo-like	conserved	region
CENP-F_leu_zip	PF10473.4	gi|479326777|ref|YP_007866834.1|	-	0.019	14.8	13.8	0.069	13.0	2.3	2.4	2	0	0	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
OmpH	PF03938.9	gi|479326777|ref|YP_007866834.1|	-	0.019	14.8	3.7	0.54	10.1	0.3	2.4	2	0	0	2	2	2	0	Outer	membrane	protein	(OmpH-like)
Baculo_PEP_C	PF04513.7	gi|479326777|ref|YP_007866834.1|	-	0.021	14.6	1.3	0.021	14.6	0.9	3.4	3	1	1	4	4	4	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
DUF1664	PF07889.7	gi|479326777|ref|YP_007866834.1|	-	0.04	13.7	11.7	1.3	8.8	0.8	2.9	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
Cytochrom_B562	PF07361.6	gi|479326777|ref|YP_007866834.1|	-	0.053	13.9	7.4	1.4	9.3	0.3	3.5	1	1	2	3	3	3	0	Cytochrome	b562
Syntaxin-6_N	PF09177.6	gi|479326777|ref|YP_007866834.1|	-	0.066	13.6	14.7	0.48	10.8	2.3	4.2	2	1	2	4	4	4	0	Syntaxin	6,	N-terminal
Cor1	PF04803.7	gi|479326777|ref|YP_007866834.1|	-	0.11	12.3	13.3	0.075	12.8	1.6	3.1	3	0	0	3	3	3	0	Cor1/Xlr/Xmr	conserved	region
PilJ	PF13675.1	gi|479326777|ref|YP_007866834.1|	-	0.12	12.6	0.3	3.2	8.0	0.0	2.5	2	0	0	2	2	2	0	Type	IV	pili	methyl-accepting	chemotaxis	transducer	N-term
DUF883	PF05957.8	gi|479326777|ref|YP_007866834.1|	-	0.14	12.5	4.4	1.3	9.4	0.2	3.2	2	2	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF883)
Apolipoprotein	PF01442.13	gi|479326777|ref|YP_007866834.1|	-	0.15	11.5	2.8	0.88	9.0	1.9	1.9	1	1	0	1	1	1	0	Apolipoprotein	A1/A4/E	domain
BMFP	PF04380.8	gi|479326777|ref|YP_007866834.1|	-	0.16	12.1	2.6	34	4.6	0.6	3.7	2	1	0	2	2	2	0	Membrane	fusogenic	activity
Sec2p	PF06428.6	gi|479326777|ref|YP_007866834.1|	-	0.17	11.7	6.9	3.8	7.4	0.3	2.8	2	0	0	2	2	2	0	GDP/GTP	exchange	factor	Sec2p
Tup_N	PF08581.5	gi|479326777|ref|YP_007866834.1|	-	0.2	11.8	11.9	1.3	9.2	0.5	4.1	3	1	0	3	3	2	0	Tup	N-terminal
Muted	PF14942.1	gi|479326777|ref|YP_007866834.1|	-	0.23	11.3	11.3	2.5	7.9	1.3	3.1	1	1	2	3	3	3	0	Organelle	biogenesis,	Muted-like	protein
YlqD	PF11068.3	gi|479326777|ref|YP_007866834.1|	-	0.28	11.1	8.1	0.23	11.4	0.3	2.8	1	1	0	2	2	2	0	YlqD	protein
IL34	PF15036.1	gi|479326777|ref|YP_007866834.1|	-	0.3	10.6	5.7	0.083	12.4	0.2	2.4	2	1	1	3	3	3	0	Interleukin	34
DUF3450	PF11932.3	gi|479326777|ref|YP_007866834.1|	-	0.37	9.9	5.1	0.39	9.9	0.2	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3450)
Prominin	PF05478.6	gi|479326777|ref|YP_007866834.1|	-	0.4	8.1	24.3	0.049	11.1	2.2	2.1	2	0	0	2	2	2	0	Prominin
ISG65-75	PF11727.3	gi|479326777|ref|YP_007866834.1|	-	0.49	9.4	12.8	0.14	11.1	2.0	2.7	2	1	1	3	3	3	0	Invariant	surface	glycoprotein
Sds3	PF08598.6	gi|479326777|ref|YP_007866834.1|	-	0.61	9.5	16.5	0.076	12.5	4.1	2.7	2	1	0	2	2	2	0	Sds3-like
Mt_ATP-synt_B	PF05405.9	gi|479326777|ref|YP_007866834.1|	-	0.68	9.3	12.7	0.1	12.0	3.0	2.5	2	0	0	2	2	2	0	Mitochondrial	ATP	synthase	B	chain	precursor	(ATP-synt_B)
Mnd1	PF03962.10	gi|479326777|ref|YP_007866834.1|	-	0.75	9.4	14.2	30	4.2	9.8	2.3	1	1	0	1	1	1	0	Mnd1	family
AF0941-like	PF14591.1	gi|479326777|ref|YP_007866834.1|	-	0.82	9.7	17.5	0.031	14.3	2.1	3.1	3	1	0	3	3	2	0	AF0941-like
DUF2265	PF10023.4	gi|479326777|ref|YP_007866834.1|	-	0.87	8.6	5.0	0.4	9.7	0.4	2.1	1	1	1	2	2	2	0	Predicted	aminopeptidase	(DUF2265)
DUF4473	PF14747.1	gi|479326777|ref|YP_007866834.1|	-	1.4	9.1	9.4	9.9	6.4	0.8	3.5	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4473)
Syntaxin	PF00804.20	gi|479326777|ref|YP_007866834.1|	-	1.8	8.7	20.2	0.29	11.3	4.1	2.8	1	1	1	2	2	2	0	Syntaxin
DUF948	PF06103.6	gi|479326777|ref|YP_007866834.1|	-	2.2	8.2	13.6	0.54	10.1	0.5	4.5	3	2	2	5	5	5	0	Bacterial	protein	of	unknown	function	(DUF948)
CR6_interact	PF10147.4	gi|479326777|ref|YP_007866834.1|	-	2.4	7.4	8.6	3.1	7.0	1.0	2.2	2	0	0	2	2	2	0	Growth	arrest	and	DNA-damage-inducible	proteins-interacting	protein	1
Cep57_MT_bd	PF06657.8	gi|479326777|ref|YP_007866834.1|	-	3.3	7.7	9.0	3.1	7.8	0.7	3.0	2	1	1	3	3	3	0	Centrosome	microtubule-binding	domain	of	Cep57
IncA	PF04156.9	gi|479326777|ref|YP_007866834.1|	-	3.5	7.1	11.7	1.2	8.7	2.9	2.4	2	0	0	2	2	2	0	IncA	protein
BAG	PF02179.11	gi|479326777|ref|YP_007866834.1|	-	3.8	7.6	9.3	4.4	7.4	0.1	3.3	4	0	0	4	4	2	0	BAG	domain
MCPsignal	PF00015.16	gi|479326777|ref|YP_007866834.1|	-	4.3	6.8	7.7	32	3.9	3.6	2.7	2	1	0	2	2	1	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
H-kinase_dim	PF02895.9	gi|479326777|ref|YP_007866834.1|	-	8.4	6.8	9.2	2e+03	-0.9	6.3	3.4	1	1	0	1	1	1	0	Signal	transducing	histidine	kinase,	homodimeric	domain
Fib_alpha	PF08702.5	gi|479326777|ref|YP_007866834.1|	-	9.1	6.4	25.3	2.8	8.0	2.5	3.6	1	1	3	4	4	4	0	Fibrinogen	alpha/beta	chain	family
Pyr_redox_2	PF07992.9	gi|479326778|ref|YP_007866835.1|	-	2.4e-29	102.6	1.1	3e-29	102.3	0.7	1.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|479326778|ref|YP_007866835.1|	-	7.3e-12	45.7	0.0	2.3e-08	34.3	0.0	3.0	1	1	2	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|479326778|ref|YP_007866835.1|	-	1.2e-09	37.5	0.3	6.6e-05	21.9	0.1	2.4	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
Pyr_redox	PF00070.22	gi|479326778|ref|YP_007866835.1|	-	1.6e-06	28.4	3.3	0.0032	17.8	0.0	3.2	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.19	gi|479326778|ref|YP_007866835.1|	-	2e-06	26.9	0.9	2.9e-05	23.1	0.1	2.4	2	1	1	3	3	3	1	FAD	binding	domain
Thi4	PF01946.12	gi|479326778|ref|YP_007866835.1|	-	3.7e-06	26.2	0.3	0.0032	16.6	0.0	2.4	2	0	0	2	2	2	2	Thi4	family
NAD_binding_8	PF13450.1	gi|479326778|ref|YP_007866835.1|	-	2.9e-05	23.9	0.3	6.7e-05	22.8	0.2	1.7	1	1	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
GIDA	PF01134.17	gi|479326778|ref|YP_007866835.1|	-	8.5e-05	21.5	7.1	0.00068	18.6	0.0	3.2	2	2	1	3	3	3	1	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.9	gi|479326778|ref|YP_007866835.1|	-	0.00018	20.1	0.5	0.081	11.3	0.0	2.9	3	0	0	3	3	3	2	HI0933-like	protein
FAD_oxidored	PF12831.2	gi|479326778|ref|YP_007866835.1|	-	0.00093	18.3	0.1	0.0058	15.7	0.0	2.1	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Lycopene_cycl	PF05834.7	gi|479326778|ref|YP_007866835.1|	-	0.022	13.6	0.2	0.14	11.0	0.1	2.3	3	0	0	3	3	3	0	Lycopene	cyclase	protein
K_oxygenase	PF13434.1	gi|479326778|ref|YP_007866835.1|	-	0.026	13.4	0.0	4.4	6.1	0.0	2.7	2	1	0	3	3	3	0	L-lysine	6-monooxygenase	(NADPH-requiring)
FAD_binding_3	PF01494.14	gi|479326778|ref|YP_007866835.1|	-	0.092	11.7	0.0	0.14	11.1	0.0	1.3	1	0	0	1	1	1	0	FAD	binding	domain
Fer4_10	PF13237.1	gi|479326779|ref|YP_007866836.1|	-	7.7e-06	25.6	4.5	1.4e-05	24.8	3.1	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|479326779|ref|YP_007866836.1|	-	4.8e-05	23.5	6.6	4.8e-05	23.5	4.6	1.8	2	0	0	2	2	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|479326779|ref|YP_007866836.1|	-	0.00014	22.1	10.2	0.0023	18.2	6.9	2.4	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|479326779|ref|YP_007866836.1|	-	0.00015	21.2	12.0	0.00031	20.2	0.6	3.0	2	1	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|479326779|ref|YP_007866836.1|	-	0.0025	17.6	12.2	0.14	12.0	1.2	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|479326779|ref|YP_007866836.1|	-	0.012	15.6	7.8	0.013	15.5	3.2	2.5	2	2	1	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_11	PF13247.1	gi|479326779|ref|YP_007866836.1|	-	0.016	15.0	1.9	0.032	14.1	1.3	1.4	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
NADH_dh_m_C1	PF15088.1	gi|479326779|ref|YP_007866836.1|	-	0.043	13.3	0.1	1.5	8.4	0.0	2.6	2	0	0	2	2	2	0	NADH	dehydrogenase	[ubiquinone]	1	subunit	C1,	mitochondrial
Fer4_18	PF13746.1	gi|479326779|ref|YP_007866836.1|	-	0.072	13.5	8.0	0.31	11.4	0.1	2.8	3	0	0	3	3	2	0	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|479326779|ref|YP_007866836.1|	-	0.087	12.7	14.6	0.099	12.6	0.2	2.7	3	0	0	3	3	2	0	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|479326779|ref|YP_007866836.1|	-	0.54	11.0	4.8	11	6.8	0.1	2.4	1	1	0	2	2	2	0	4Fe-4S	double	cluster	binding	domain
DUF4231	PF14015.1	gi|479326779|ref|YP_007866836.1|	-	0.69	9.9	3.7	16	5.5	0.2	3.4	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF4231)
Fer4_17	PF13534.1	gi|479326779|ref|YP_007866836.1|	-	1.5	9.2	9.7	29	5.0	0.7	2.7	2	1	1	3	3	2	0	4Fe-4S	dicluster	domain
ETF	PF01012.16	gi|479326780|ref|YP_007866837.1|	-	9.4e-29	100.2	0.0	1.2e-28	99.8	0.0	1.1	1	0	0	1	1	1	1	Electron	transfer	flavoprotein	domain
B12-binding	PF02310.14	gi|479326780|ref|YP_007866837.1|	-	0.04	13.7	0.2	0.33	10.8	0.0	2.2	1	1	1	2	2	2	0	B12	binding	domain
Surf_Ag_VNR	PF07244.10	gi|479326780|ref|YP_007866837.1|	-	0.5	10.8	3.7	4.5	7.7	0.4	3.0	3	0	0	3	3	3	0	Surface	antigen	variable	number	repeat
ETF_alpha	PF00766.14	gi|479326781|ref|YP_007866838.1|	-	2.7e-31	106.9	1.3	6.4e-31	105.8	0.4	2.0	2	0	0	2	2	2	1	Electron	transfer	flavoprotein	FAD-binding	domain
ETF	PF01012.16	gi|479326781|ref|YP_007866838.1|	-	2.2e-14	53.4	1.0	3.6e-14	52.8	0.1	1.7	2	0	0	2	2	2	1	Electron	transfer	flavoprotein	domain
Acyl-CoA_dh_1	PF00441.19	gi|479326782|ref|YP_007866839.1|	-	1.5e-38	132.2	0.7	2.4e-38	131.5	0.5	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.11	gi|479326782|ref|YP_007866839.1|	-	3e-23	82.5	0.0	6.6e-23	81.4	0.0	1.6	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|479326782|ref|YP_007866839.1|	-	1e-20	72.9	0.1	2.5e-20	71.7	0.0	1.7	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.6	gi|479326782|ref|YP_007866839.1|	-	1.1e-17	64.4	0.1	2e-17	63.7	0.0	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Ald_Xan_dh_C2	PF02738.13	gi|479326783|ref|YP_007866840.1|	-	1.2e-110	370.4	0.0	1.5e-110	370.0	0.0	1.0	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|479326783|ref|YP_007866840.1|	-	1.1e-05	25.4	0.0	2.1e-05	24.5	0.0	1.5	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
DUF167	PF02594.11	gi|479326783|ref|YP_007866840.1|	-	0.092	12.6	1.1	2.8	7.9	0.1	3.2	3	0	0	3	3	3	0	Uncharacterised	ACR,	YggU	family	COG1872
DrrA_P4M	PF14860.1	gi|479326784|ref|YP_007866841.1|	-	0.014	15.1	1.4	0.097	12.4	0.5	1.9	1	1	1	2	2	2	0	DrrA	phosphatidylinositol	4-phosphate	binding	domain
RepB-RCR_reg	PF10723.4	gi|479326784|ref|YP_007866841.1|	-	0.12	12.1	0.1	0.18	11.5	0.1	1.3	1	0	0	1	1	1	0	Replication	regulatory	protein	RepB
Fer4_11	PF13247.1	gi|479326785|ref|YP_007866842.1|	-	1.4e-24	85.8	13.8	3.2e-24	84.6	6.9	2.1	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|479326785|ref|YP_007866842.1|	-	2e-14	53.7	25.9	3.9e-09	36.7	4.5	2.8	2	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|479326785|ref|YP_007866842.1|	-	5.4e-13	47.9	39.0	1.3e-07	30.9	1.4	5.3	6	0	0	6	6	5	4	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|479326785|ref|YP_007866842.1|	-	7.9e-12	44.5	38.3	1.1e-06	28.1	1.3	4.7	4	1	0	4	4	4	4	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|479326785|ref|YP_007866842.1|	-	2.8e-10	40.3	27.2	1.1e-06	28.7	5.3	3.2	1	1	3	4	4	4	4	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|479326785|ref|YP_007866842.1|	-	1.3e-08	34.4	33.1	4.4e-05	23.2	6.7	3.5	1	1	3	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|479326785|ref|YP_007866842.1|	-	3.3e-07	30.0	25.0	0.00029	20.6	4.1	2.7	1	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|479326785|ref|YP_007866842.1|	-	3.9e-07	29.5	36.2	4.1e-05	23.2	1.3	4.7	4	1	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|479326785|ref|YP_007866842.1|	-	7.6e-07	29.2	41.8	0.0069	16.8	2.0	4.2	4	0	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|479326785|ref|YP_007866842.1|	-	4.8e-06	27.2	25.4	0.21	12.3	2.2	4.4	3	1	1	4	4	4	4	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.2	gi|479326785|ref|YP_007866842.1|	-	9e-06	25.6	35.1	0.0013	18.8	1.8	4.5	4	1	0	4	4	4	3	4Fe-4S	binding	domain
DmsC	PF04976.7	gi|479326785|ref|YP_007866842.1|	-	0.00042	19.6	11.6	0.00081	18.7	8.1	1.4	1	1	0	1	1	1	1	DMSO	reductase	anchor	subunit	(DmsC)
Fer4_8	PF13183.1	gi|479326785|ref|YP_007866842.1|	-	0.0012	18.8	28.4	0.16	11.9	8.1	3.3	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|479326785|ref|YP_007866842.1|	-	0.0057	16.9	24.1	2.3	8.6	0.4	4.3	3	1	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|479326785|ref|YP_007866842.1|	-	0.1	13.2	1.0	0.1	13.2	0.7	3.8	2	1	0	3	3	3	0	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.1	gi|479326785|ref|YP_007866842.1|	-	1.2	9.6	27.2	0.81	10.1	0.8	4.4	3	1	0	4	4	4	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|479326785|ref|YP_007866842.1|	-	3.3	8.1	27.4	2.6	8.4	6.0	3.7	2	2	0	2	2	2	0	4Fe-4S	single	cluster	domain
POR	PF01558.13	gi|479326786|ref|YP_007866843.1|	-	8.4e-37	126.7	0.0	1e-36	126.4	0.0	1.1	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
Fer4	PF00037.22	gi|479326787|ref|YP_007866844.1|	-	5.1e-16	57.5	16.1	5.7e-09	35.2	3.3	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|479326787|ref|YP_007866844.1|	-	4.9e-14	51.8	21.0	1.2e-10	40.9	7.7	1.5	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|479326787|ref|YP_007866844.1|	-	6.9e-13	47.8	15.6	1.7e-06	27.6	3.1	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|479326787|ref|YP_007866844.1|	-	9.2e-12	44.6	9.0	1.3e-11	44.1	6.3	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|479326787|ref|YP_007866844.1|	-	4.7e-11	41.9	14.4	2.3e-06	27.1	2.3	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|479326787|ref|YP_007866844.1|	-	9.6e-11	41.9	12.8	1.4e-10	41.3	8.8	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|479326787|ref|YP_007866844.1|	-	5e-09	36.7	7.0	8.7e-05	23.1	1.5	2.2	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_9	PF13187.1	gi|479326787|ref|YP_007866844.1|	-	1.3e-08	34.9	13.4	1.9e-08	34.4	9.3	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|479326787|ref|YP_007866844.1|	-	6.2e-08	32.3	13.3	0.00049	20.2	1.4	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|479326787|ref|YP_007866844.1|	-	3e-07	30.7	7.2	0.0025	18.1	0.2	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|479326787|ref|YP_007866844.1|	-	2.3e-06	28.0	12.5	0.0016	18.9	0.7	2.6	1	1	1	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.1	gi|479326787|ref|YP_007866844.1|	-	8.3e-06	26.1	9.5	0.0023	18.2	0.6	2.2	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_17	PF13534.1	gi|479326787|ref|YP_007866844.1|	-	1.4e-05	25.3	6.4	0.013	15.7	0.1	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|479326787|ref|YP_007866844.1|	-	7.2e-05	22.7	14.5	0.0024	17.8	10.3	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|479326787|ref|YP_007866844.1|	-	0.022	15.2	19.0	0.1	13.1	5.5	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_11	PF13247.1	gi|479326787|ref|YP_007866844.1|	-	0.038	13.8	7.1	0.057	13.3	4.9	1.4	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
POR_N	PF01855.14	gi|479326788|ref|YP_007866845.1|	-	3e-69	233.0	0.0	3.8e-69	232.7	0.0	1.1	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Transketolase_C	PF02780.15	gi|479326788|ref|YP_007866845.1|	-	3.2e-08	33.5	0.0	7.7e-08	32.3	0.0	1.6	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
TPP_enzyme_N	PF02776.13	gi|479326788|ref|YP_007866845.1|	-	0.00011	21.7	0.2	0.00019	20.9	0.1	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|479326789|ref|YP_007866846.1|	-	4.6e-23	81.4	0.5	5.9e-23	81.1	0.3	1.1	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
E1_dh	PF00676.15	gi|479326789|ref|YP_007866846.1|	-	0.00094	17.9	0.2	0.0014	17.4	0.1	1.2	1	0	0	1	1	1	1	Dehydrogenase	E1	component
DXP_synthase_N	PF13292.1	gi|479326789|ref|YP_007866846.1|	-	0.016	14.1	0.9	0.074	11.9	0.2	1.9	1	1	1	2	2	2	0	1-deoxy-D-xylulose-5-phosphate	synthase
Glycos_transf_1	PF00534.15	gi|479326790|ref|YP_007866847.1|	-	1.6e-34	118.7	0.2	4.5e-34	117.3	0.0	1.8	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|479326790|ref|YP_007866847.1|	-	1.4e-14	54.3	0.0	3.3e-14	53.1	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|479326790|ref|YP_007866847.1|	-	6.1e-07	29.6	0.0	2.2e-06	27.8	0.0	2.0	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_transf_20	PF00982.16	gi|479326790|ref|YP_007866847.1|	-	0.0011	17.5	0.1	0.0081	14.6	0.1	2.2	2	1	0	2	2	2	1	Glycosyltransferase	family	20
Glyco_hydro_15	PF00723.16	gi|479326791|ref|YP_007866848.1|	-	7.9e-54	182.9	0.5	1.9e-50	171.7	0.7	2.0	1	1	1	2	2	2	2	Glycosyl	hydrolases	family	15
Cupin_5	PF06172.6	gi|479326792|ref|YP_007866849.1|	-	0.048	13.5	0.1	0.073	12.9	0.1	1.3	1	0	0	1	1	1	0	Cupin	superfamily	(DUF985)
DUF1803	PF08820.5	gi|479326792|ref|YP_007866849.1|	-	0.055	13.1	1.3	0.097	12.3	0.9	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1803)
Stk19	PF10494.4	gi|479326793|ref|YP_007866850.1|	-	0.0075	15.6	0.4	0.0098	15.3	0.3	1.1	1	0	0	1	1	1	1	Serine-threonine	protein	kinase	19
DUF3895	PF13034.1	gi|479326793|ref|YP_007866850.1|	-	0.017	14.6	0.1	0.87	9.1	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3895)
MA3	PF02847.12	gi|479326793|ref|YP_007866850.1|	-	0.018	14.7	0.6	0.062	13.0	0.0	2.1	3	0	0	3	3	3	0	MA3	domain
ESCRT-II	PF05871.7	gi|479326793|ref|YP_007866850.1|	-	0.026	14.4	0.3	0.034	14.0	0.2	1.2	1	0	0	1	1	1	0	ESCRT-II	complex	subunit
SelB-wing_2	PF09106.6	gi|479326793|ref|YP_007866850.1|	-	0.028	14.3	0.2	9.9	6.1	0.0	2.6	2	0	0	2	2	2	0	Elongation	factor	SelB,	winged	helix
PSD2	PF07624.6	gi|479326793|ref|YP_007866850.1|	-	0.08	12.6	0.2	0.95	9.1	0.1	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1585)
TFIIE_beta	PF02186.10	gi|479326793|ref|YP_007866850.1|	-	0.084	12.8	1.1	0.2	11.7	0.8	1.5	1	0	0	1	1	1	0	TFIIE	beta	subunit	core	domain
Ead_Ea22	PF13935.1	gi|479326793|ref|YP_007866850.1|	-	0.12	12.7	0.5	0.16	12.2	0.3	1.2	1	0	0	1	1	1	0	Ead/Ea22-like	protein
LexA_DNA_bind	PF01726.11	gi|479326793|ref|YP_007866850.1|	-	0.12	11.9	0.5	0.52	9.9	0.1	2.3	2	1	0	2	2	2	0	LexA	DNA	binding	domain
AAA_22	PF13401.1	gi|479326794|ref|YP_007866851.1|	-	3.6e-05	23.9	0.1	0.00073	19.6	0.1	2.6	1	1	0	1	1	1	1	AAA	domain
ABC_tran	PF00005.22	gi|479326794|ref|YP_007866851.1|	-	5.2e-05	23.5	0.0	0.0002	21.6	0.0	2.0	2	0	0	2	2	2	1	ABC	transporter
AAA_14	PF13173.1	gi|479326794|ref|YP_007866851.1|	-	0.00027	20.8	1.3	0.0056	16.5	0.1	3.0	1	1	1	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|479326794|ref|YP_007866851.1|	-	0.00073	20.3	1.1	0.011	16.4	0.0	2.8	2	1	0	2	2	2	1	AAA	domain
NTPase_1	PF03266.10	gi|479326794|ref|YP_007866851.1|	-	0.00095	18.9	0.6	0.016	14.9	0.1	2.8	4	0	0	4	4	3	1	NTPase
NB-ARC	PF00931.17	gi|479326794|ref|YP_007866851.1|	-	0.0011	17.9	0.2	0.0021	16.9	0.0	1.6	2	0	0	2	2	2	1	NB-ARC	domain
AAA_16	PF13191.1	gi|479326794|ref|YP_007866851.1|	-	0.0012	18.8	0.0	0.0037	17.2	0.0	1.8	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA	PF00004.24	gi|479326794|ref|YP_007866851.1|	-	0.0013	18.8	0.4	0.0064	16.6	0.0	2.3	2	2	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
NACHT	PF05729.7	gi|479326794|ref|YP_007866851.1|	-	0.0032	17.1	0.0	0.0089	15.6	0.0	1.7	2	0	0	2	2	1	1	NACHT	domain
AAA_18	PF13238.1	gi|479326794|ref|YP_007866851.1|	-	0.0049	17.1	0.5	0.0049	17.1	0.3	2.7	2	1	1	3	3	2	1	AAA	domain
Zeta_toxin	PF06414.7	gi|479326794|ref|YP_007866851.1|	-	0.0063	15.6	0.0	0.022	13.8	0.0	2.0	1	0	0	1	1	1	1	Zeta	toxin
ATP_bind_1	PF03029.12	gi|479326794|ref|YP_007866851.1|	-	0.0086	15.6	0.1	0.034	13.6	0.0	1.9	2	0	0	2	2	2	1	Conserved	hypothetical	ATP	binding	protein
Img2	PF05046.9	gi|479326794|ref|YP_007866851.1|	-	0.0099	16.0	0.2	0.33	11.1	0.0	3.1	3	0	0	3	3	3	1	Mitochondrial	large	subunit	ribosomal	protein	(Img2)
AAA_10	PF12846.2	gi|479326794|ref|YP_007866851.1|	-	0.01	15.2	0.0	0.023	14.1	0.0	1.7	1	1	0	1	1	1	0	AAA-like	domain
AAA_25	PF13481.1	gi|479326794|ref|YP_007866851.1|	-	0.013	14.9	0.0	0.049	13.0	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
DUF258	PF03193.11	gi|479326794|ref|YP_007866851.1|	-	0.016	14.4	0.1	0.031	13.4	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_30	PF13604.1	gi|479326794|ref|YP_007866851.1|	-	0.018	14.6	0.0	0.031	13.8	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
MobB	PF03205.9	gi|479326794|ref|YP_007866851.1|	-	0.021	14.5	0.0	0.049	13.3	0.0	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_19	PF13245.1	gi|479326794|ref|YP_007866851.1|	-	0.025	14.3	0.0	0.068	12.9	0.0	1.8	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_5	PF07728.9	gi|479326794|ref|YP_007866851.1|	-	0.031	13.9	0.0	0.18	11.5	0.0	2.2	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
AAA_24	PF13479.1	gi|479326794|ref|YP_007866851.1|	-	0.035	13.6	0.0	0.063	12.8	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
cobW	PF02492.14	gi|479326794|ref|YP_007866851.1|	-	0.053	12.9	0.0	0.11	11.9	0.0	1.5	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
MCM	PF00493.18	gi|479326794|ref|YP_007866851.1|	-	0.053	12.3	0.3	0.18	10.5	0.0	1.9	2	1	1	3	3	3	0	MCM2/3/5	family
Miro	PF08477.8	gi|479326794|ref|YP_007866851.1|	-	0.08	13.4	0.0	0.27	11.7	0.0	1.9	1	0	0	1	1	1	0	Miro-like	protein
PTS_IIB	PF02302.12	gi|479326794|ref|YP_007866851.1|	-	0.13	12.7	0.4	30	5.1	0.0	3.6	3	0	0	3	3	3	0	PTS	system,	Lactose/Cellobiose	specific	IIB	subunit
SRP54	PF00448.17	gi|479326794|ref|YP_007866851.1|	-	0.13	11.7	0.2	0.43	10.0	0.0	1.9	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
DUF4318	PF14201.1	gi|479326794|ref|YP_007866851.1|	-	5.5	6.8	7.6	0.88	9.4	0.1	3.0	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4318)
Linocin_M18	PF04454.7	gi|479326795|ref|YP_007866852.1|	-	6.8e-50	169.3	0.2	1.1e-49	168.7	0.1	1.2	1	0	0	1	1	1	1	Encapsulating	protein	for	peroxidase
Rubrerythrin	PF02915.12	gi|479326795|ref|YP_007866852.1|	-	8e-05	22.9	0.1	0.00017	21.9	0.1	1.5	1	0	0	1	1	1	1	Rubrerythrin
Ferritin	PF00210.19	gi|479326795|ref|YP_007866852.1|	-	0.013	15.2	0.1	0.023	14.4	0.1	1.4	1	0	0	1	1	1	0	Ferritin-like	domain
Aldose_epim	PF01263.15	gi|479326797|ref|YP_007866854.1|	-	1.5e-34	119.5	0.0	2.8e-34	118.6	0.0	1.4	1	1	0	1	1	1	1	Aldose	1-epimerase
MFS_1	PF07690.11	gi|479326798|ref|YP_007866855.1|	-	8.2e-20	70.8	44.8	9.2e-12	44.3	13.7	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
TM_helix	PF05552.7	gi|479326798|ref|YP_007866855.1|	-	0.062	12.9	0.5	0.062	12.9	0.3	3.0	3	0	0	3	3	3	0	Conserved	TM	helix
MFS_3	PF05977.8	gi|479326798|ref|YP_007866855.1|	-	0.31	9.0	10.4	0.52	8.3	2.5	2.3	2	0	0	2	2	2	0	Transmembrane	secretion	effector
DUF2173	PF09941.4	gi|479326799|ref|YP_007866856.1|	-	5e-43	145.4	0.4	5.8e-43	145.2	0.3	1.0	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2173)
FlgM	PF04316.8	gi|479326799|ref|YP_007866856.1|	-	0.0016	18.3	0.1	0.005	16.7	0.0	1.8	2	0	0	2	2	2	1	Anti-sigma-28	factor,	FlgM
Radical_SAM	PF04055.16	gi|479326800|ref|YP_007866857.1|	-	3.7e-13	49.9	0.0	4.9e-13	49.5	0.0	1.2	1	0	0	1	1	1	1	Radical	SAM	superfamily
DUF1848	PF08902.6	gi|479326800|ref|YP_007866857.1|	-	0.032	13.7	5.0	0.092	12.2	0.0	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1848)
Fer4_14	PF13394.1	gi|479326800|ref|YP_007866857.1|	-	0.093	12.7	0.1	0.45	10.5	0.0	2.1	1	1	0	1	1	1	0	4Fe-4S	single	cluster	domain
DUF650	PF04894.7	gi|479326801|ref|YP_007866858.1|	-	3.7e-70	236.5	0.0	5.3e-70	236.0	0.0	1.2	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF650)
DUF651	PF04895.7	gi|479326801|ref|YP_007866858.1|	-	1.1e-38	131.2	0.0	1.8e-38	130.5	0.0	1.4	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF651)
Glyco_hydro_15	PF00723.16	gi|479326802|ref|YP_007866859.1|	-	2.4e-59	201.0	0.0	3.7e-57	193.8	0.0	2.1	1	1	0	1	1	1	1	Glycosyl	hydrolases	family	15
DUF608	PF04685.8	gi|479326802|ref|YP_007866859.1|	-	2.3e-05	23.3	0.7	2.3e-05	23.3	0.5	2.0	2	0	0	2	2	2	1	Protein	of	unknown	function,	DUF608
TPR_8	PF13181.1	gi|479326802|ref|YP_007866859.1|	-	0.0037	16.9	0.1	0.061	13.1	0.0	2.4	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|479326802|ref|YP_007866859.1|	-	0.22	12.2	0.0	4.2	8.2	0.0	2.5	2	0	0	2	2	2	0	Tetratricopeptide	repeat
CBS	PF00571.23	gi|479326804|ref|YP_007866861.1|	-	4.4e-58	192.8	9.7	7.5e-16	57.6	0.0	4.0	4	0	0	4	4	4	4	CBS	domain
DisA_N	PF02457.11	gi|479326804|ref|YP_007866861.1|	-	0.026	13.6	0.2	3.9	6.6	0.0	2.8	2	1	0	2	2	2	0	DisA	bacterial	checkpoint	controller	nucleotide-binding
Ribosomal_L9_C	PF03948.9	gi|479326804|ref|YP_007866861.1|	-	0.029	14.4	0.1	1.3	9.1	0.0	3.0	3	0	0	3	3	3	0	Ribosomal	protein	L9,	C-terminal	domain
HpaB_N	PF11794.3	gi|479326805|ref|YP_007866862.1|	-	2.6e-89	299.1	0.4	2.6e-89	299.1	0.2	1.5	2	0	0	2	2	2	1	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
HpaB	PF03241.8	gi|479326805|ref|YP_007866862.1|	-	6.8e-63	211.2	0.0	1e-62	210.6	0.0	1.3	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	C	terminal
Peptidase_M20	PF01546.23	gi|479326806|ref|YP_007866863.1|	-	5.5e-33	114.0	0.0	7.2e-33	113.6	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|479326806|ref|YP_007866863.1|	-	4e-17	61.9	0.0	2.1e-16	59.6	0.0	2.1	2	0	0	2	2	2	1	Peptidase	dimerisation	domain
DUF433	PF04255.9	gi|479326807|ref|YP_007866864.1|	-	4.1e-15	54.9	0.0	5e-11	41.8	0.0	2.4	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF433)
Tox-REase-3	PF15647.1	gi|479326807|ref|YP_007866864.1|	-	0.22	11.3	2.6	0.69	9.7	0.4	2.2	1	1	1	2	2	2	0	Restriction	endonuclease	fold	toxin	3
Pro_CA	PF00484.14	gi|479326808|ref|YP_007866865.1|	-	7.9e-14	51.9	0.0	4.4e-12	46.2	0.0	2.1	2	0	0	2	2	2	2	Carbonic	anhydrase
Takusan	PF04822.8	gi|479326808|ref|YP_007866865.1|	-	0.025	14.3	0.2	9.3	6.0	0.0	2.4	2	0	0	2	2	2	0	Takusan
UDG	PF03167.14	gi|479326811|ref|YP_007866868.1|	-	1.3e-21	76.6	0.0	1.6e-21	76.3	0.0	1.0	1	0	0	1	1	1	1	Uracil	DNA	glycosylase	superfamily
Arginase	PF00491.16	gi|479326812|ref|YP_007866869.1|	-	5.8e-77	258.7	0.0	6.9e-77	258.4	0.0	1.0	1	0	0	1	1	1	1	Arginase	family
DUF2396	PF09654.5	gi|479326812|ref|YP_007866869.1|	-	0.052	13.5	0.3	0.08	12.9	0.2	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2396)
AA_permease	PF00324.16	gi|479326814|ref|YP_007866871.1|	-	3.4e-99	332.3	48.5	4.2e-99	332.0	33.6	1.1	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease_2	PF13520.1	gi|479326814|ref|YP_007866871.1|	-	6.4e-14	51.3	54.6	8.4e-14	50.9	37.8	1.1	1	0	0	1	1	1	1	Amino	acid	permease
Aminotran_3	PF00202.16	gi|479326815|ref|YP_007866872.1|	-	1.1e-91	307.2	0.0	1.2e-91	307.0	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
AA_permease_2	PF13520.1	gi|479326816|ref|YP_007866873.1|	-	4.1e-58	196.9	74.3	5.1e-58	196.6	51.5	1.0	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|479326816|ref|YP_007866873.1|	-	0.011	14.1	61.8	0.037	12.3	42.8	1.8	1	1	0	1	1	1	0	Amino	acid	permease
Metallophos_2	PF12850.2	gi|479326817|ref|YP_007866874.1|	-	0.00077	19.3	0.1	0.0014	18.5	0.0	1.6	2	1	0	2	2	2	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos_3	PF14582.1	gi|479326817|ref|YP_007866874.1|	-	0.0038	16.4	0.0	0.0086	15.2	0.0	1.8	1	0	0	1	1	1	1	Metallophosphoesterase,	calcineurin	superfamily
Metallophos	PF00149.23	gi|479326817|ref|YP_007866874.1|	-	0.51	9.6	3.0	1.6	8.0	2.1	2.3	1	1	0	1	1	1	0	Calcineurin-like	phosphoesterase
Peptidase_M20	PF01546.23	gi|479326818|ref|YP_007866875.1|	-	1.2e-26	93.4	0.0	1.4e-26	93.1	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|479326818|ref|YP_007866875.1|	-	3.5e-07	29.9	0.0	8.6e-07	28.6	0.0	1.7	1	1	1	2	2	2	1	Peptidase	dimerisation	domain
Peptidase_M28	PF04389.12	gi|479326818|ref|YP_007866875.1|	-	0.012	15.3	0.0	0.022	14.5	0.0	1.4	1	0	0	1	1	1	0	Peptidase	family	M28
Tn7_TnsC_Int	PF11426.3	gi|479326818|ref|YP_007866875.1|	-	0.02	14.5	0.5	0.25	11.0	0.1	2.3	2	0	0	2	2	2	0	Tn7	transposition	regulator	TnsC
MFS_1	PF07690.11	gi|479326820|ref|YP_007866877.1|	-	3.3e-45	154.3	28.1	5.2e-45	153.6	19.5	1.3	1	0	0	1	1	1	1	Major	Facilitator	Superfamily
OATP	PF03137.15	gi|479326820|ref|YP_007866877.1|	-	4.8e-05	21.6	8.4	0.0014	16.7	0.5	3.3	2	2	1	3	3	3	2	Organic	Anion	Transporter	Polypeptide	(OATP)	family
Herpes_LMP1	PF05297.6	gi|479326820|ref|YP_007866877.1|	-	0.028	13.3	1.7	0.057	12.3	1.2	1.4	1	0	0	1	1	1	0	Herpesvirus	latent	membrane	protein	1	(LMP1)
DUF1469	PF07332.6	gi|479326820|ref|YP_007866877.1|	-	0.4	10.4	0.0	0.4	10.4	0.0	3.6	5	0	0	5	5	5	0	Protein	of	unknown	function	(DUF1469)
DUF1228	PF06779.9	gi|479326820|ref|YP_007866877.1|	-	5	7.2	8.5	15	5.6	0.0	3.6	3	1	1	4	4	4	0	Protein	of	unknown	function	(DUF1228)
ADH_N	PF08240.7	gi|479326821|ref|YP_007866878.1|	-	1.6e-22	79.3	0.7	5.8e-22	77.5	0.5	1.9	1	1	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ApbA	PF02558.11	gi|479326821|ref|YP_007866878.1|	-	0.019	14.3	0.1	0.031	13.7	0.1	1.3	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
ADH_zinc_N	PF00107.21	gi|479326821|ref|YP_007866878.1|	-	0.11	12.0	0.0	0.41	10.2	0.0	1.9	1	1	0	1	1	1	0	Zinc-binding	dehydrogenase
MFS_1	PF07690.11	gi|479326822|ref|YP_007866879.1|	-	1.4e-49	168.7	51.4	1.4e-49	168.7	35.6	2.5	2	1	0	2	2	2	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|479326822|ref|YP_007866879.1|	-	7.8e-10	37.9	13.8	7.8e-10	37.9	9.6	2.9	2	1	0	2	2	2	1	Sugar	(and	other)	transporter
MFS_3	PF05977.8	gi|479326822|ref|YP_007866879.1|	-	7.7e-06	24.3	10.2	7.7e-06	24.3	7.1	2.4	2	0	0	2	2	2	2	Transmembrane	secretion	effector
BPD_transp_1	PF00528.17	gi|479326823|ref|YP_007866880.1|	-	5.2e-15	55.4	46.6	1.1e-10	41.3	15.9	4.3	2	2	2	4	4	4	2	Binding-protein-dependent	transport	system	inner	membrane	component
ABC_tran	PF00005.22	gi|479326824|ref|YP_007866881.1|	-	1.7e-35	122.2	0.0	2.9e-35	121.5	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|479326824|ref|YP_007866881.1|	-	5.3e-12	46.3	4.8	1.7e-10	41.3	0.4	2.6	2	1	0	2	2	2	1	AAA	domain
AAA_15	PF13175.1	gi|479326824|ref|YP_007866881.1|	-	7.8e-11	41.6	2.8	1.6e-06	27.4	0.0	2.3	1	1	1	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|479326824|ref|YP_007866881.1|	-	0.00014	21.2	2.7	0.00055	19.2	1.9	1.8	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
TOBE_2	PF08402.5	gi|479326824|ref|YP_007866881.1|	-	0.00014	21.8	0.0	0.00049	20.0	0.0	1.9	2	0	0	2	2	2	1	TOBE	domain
AAA_18	PF13238.1	gi|479326824|ref|YP_007866881.1|	-	0.00022	21.5	0.2	0.00042	20.6	0.2	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.1	gi|479326824|ref|YP_007866881.1|	-	0.00071	19.9	1.0	0.00071	19.9	0.7	2.6	3	1	0	3	3	2	1	AAA	domain
AAA_22	PF13401.1	gi|479326824|ref|YP_007866881.1|	-	0.002	18.2	0.2	0.0079	16.3	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|479326824|ref|YP_007866881.1|	-	0.0021	17.5	0.6	0.0069	15.8	0.1	1.8	1	1	0	2	2	2	1	AAA-like	domain
AAA_17	PF13207.1	gi|479326824|ref|YP_007866881.1|	-	0.0027	18.5	1.4	0.018	15.8	1.0	2.4	1	1	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|479326824|ref|YP_007866881.1|	-	0.0028	16.8	0.1	0.0052	15.9	0.1	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_29	PF13555.1	gi|479326824|ref|YP_007866881.1|	-	0.003	17.0	0.1	0.0071	15.8	0.1	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.1	gi|479326824|ref|YP_007866881.1|	-	0.0043	17.0	0.1	0.0089	16.0	0.1	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
Arch_ATPase	PF01637.13	gi|479326824|ref|YP_007866881.1|	-	0.0049	16.6	0.5	0.0093	15.6	0.1	1.6	2	0	0	2	2	1	1	Archaeal	ATPase
Miro	PF08477.8	gi|479326824|ref|YP_007866881.1|	-	0.0055	17.1	0.0	0.012	16.0	0.0	1.7	1	0	0	1	1	1	1	Miro-like	protein
PIF1	PF05970.9	gi|479326824|ref|YP_007866881.1|	-	0.011	14.7	0.2	0.11	11.3	0.0	2.1	2	0	0	2	2	2	0	PIF1-like	helicase
AAA_13	PF13166.1	gi|479326824|ref|YP_007866881.1|	-	0.014	13.8	0.0	0.18	10.2	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
NACHT	PF05729.7	gi|479326824|ref|YP_007866881.1|	-	0.016	14.8	0.1	0.03	13.9	0.1	1.4	1	0	0	1	1	1	0	NACHT	domain
AAA_19	PF13245.1	gi|479326824|ref|YP_007866881.1|	-	0.017	14.8	0.0	0.034	13.9	0.0	1.4	1	0	0	1	1	1	0	Part	of	AAA	domain
ABC_ATPase	PF09818.4	gi|479326824|ref|YP_007866881.1|	-	0.017	13.6	0.2	6.5	5.2	0.1	2.8	2	1	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
AAA_33	PF13671.1	gi|479326824|ref|YP_007866881.1|	-	0.018	14.9	0.0	0.044	13.6	0.0	1.8	1	1	0	1	1	1	0	AAA	domain
AAA_25	PF13481.1	gi|479326824|ref|YP_007866881.1|	-	0.035	13.5	0.1	0.11	11.9	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
T2SE	PF00437.15	gi|479326824|ref|YP_007866881.1|	-	0.058	12.2	0.1	0.12	11.2	0.0	1.5	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_24	PF13479.1	gi|479326824|ref|YP_007866881.1|	-	0.072	12.6	0.3	0.19	11.2	0.0	1.8	2	0	0	2	2	1	0	AAA	domain
UPF0079	PF02367.12	gi|479326824|ref|YP_007866881.1|	-	0.091	12.3	0.1	0.22	11.1	0.1	1.6	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
cobW	PF02492.14	gi|479326824|ref|YP_007866881.1|	-	0.12	11.7	0.1	0.24	10.8	0.1	1.5	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_30	PF13604.1	gi|479326824|ref|YP_007866881.1|	-	0.15	11.6	0.0	0.3	10.6	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
SBP_bac_8	PF13416.1	gi|479326825|ref|YP_007866882.1|	-	3.4e-16	59.8	0.1	3.4e-16	59.8	0.1	1.6	2	0	0	2	2	2	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_1	PF01547.20	gi|479326825|ref|YP_007866882.1|	-	6e-13	49.2	0.8	3.2e-12	46.8	0.1	2.4	2	1	0	2	2	2	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_11	PF13531.1	gi|479326825|ref|YP_007866882.1|	-	1.5e-05	24.7	0.1	0.00063	19.4	0.0	2.7	2	0	0	2	2	2	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_6	PF13343.1	gi|479326825|ref|YP_007866882.1|	-	0.015	14.5	0.0	0.036	13.3	0.0	1.6	1	0	0	1	1	1	0	Bacterial	extracellular	solute-binding	protein
DUF1628	PF07790.6	gi|479326825|ref|YP_007866882.1|	-	0.027	15.2	3.4	0.056	14.1	2.3	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1628)
DUF4261	PF14080.1	gi|479326825|ref|YP_007866882.1|	-	0.06	13.1	0.2	0.15	11.8	0.1	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4261)
DUF4307	PF14155.1	gi|479326825|ref|YP_007866882.1|	-	0.17	11.7	2.5	0.35	10.6	1.7	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4307)
CxxCxxCC	PF03692.10	gi|479326826|ref|YP_007866883.1|	-	4.2e-09	36.7	1.6	6.1e-09	36.2	1.1	1.3	1	0	0	1	1	1	1	Putative	zinc-	or	iron-chelating	domain
TPR_11	PF13414.1	gi|479326827|ref|YP_007866884.1|	-	2.9e-36	122.9	28.9	3e-12	45.9	0.1	5.1	1	1	4	5	5	5	5	TPR	repeat
TPR_2	PF07719.12	gi|479326827|ref|YP_007866884.1|	-	2.5e-28	95.6	23.1	7.7e-06	25.4	0.0	7.5	7	1	0	7	7	7	5	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|479326827|ref|YP_007866884.1|	-	6.4e-27	92.0	29.2	9.8e-08	31.2	0.4	6.8	7	0	0	7	7	7	5	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|479326827|ref|YP_007866884.1|	-	3.4e-26	91.1	11.2	1.7e-09	37.6	1.1	3.3	2	1	1	3	3	3	3	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_19	PF14559.1	gi|479326827|ref|YP_007866884.1|	-	1.4e-24	86.2	8.8	9.8e-09	35.4	0.0	4.2	3	1	1	4	4	4	3	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|479326827|ref|YP_007866884.1|	-	9.1e-24	83.5	4.1	1e-06	29.2	0.0	4.5	2	2	4	6	6	6	5	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|479326827|ref|YP_007866884.1|	-	9.8e-23	78.1	26.0	4e-05	23.0	0.1	7.2	7	0	0	7	7	7	5	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|479326827|ref|YP_007866884.1|	-	2.2e-17	61.7	13.6	0.0006	19.8	0.0	7.6	8	0	0	8	8	7	4	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|479326827|ref|YP_007866884.1|	-	4.5e-17	61.7	36.5	3.7e-05	23.5	0.2	5.2	1	1	5	6	6	6	6	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|479326827|ref|YP_007866884.1|	-	5.7e-17	60.6	0.2	0.00068	20.0	0.0	5.6	4	3	3	7	7	6	3	Tetratricopeptide	repeat
TPR_9	PF13371.1	gi|479326827|ref|YP_007866884.1|	-	2.4e-16	59.3	0.0	2.9e-05	23.8	0.0	3.4	3	0	0	3	3	3	3	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|479326827|ref|YP_007866884.1|	-	2.1e-12	45.8	12.1	8.9e-05	22.0	0.1	6.3	5	1	2	7	7	6	3	Tetratricopeptide	repeat
NARP1	PF12569.3	gi|479326827|ref|YP_007866884.1|	-	1e-10	40.9	9.7	7.3e-05	21.7	0.1	3.2	2	1	1	3	3	3	3	NMDA	receptor-regulated	protein	1
TPR_15	PF13429.1	gi|479326827|ref|YP_007866884.1|	-	8.3e-10	38.1	3.4	3.7e-06	26.1	0.7	3.0	1	1	2	3	3	3	2	Tetratricopeptide	repeat
TPR_21	PF09976.4	gi|479326827|ref|YP_007866884.1|	-	1.1e-08	35.1	1.4	7.7e-06	25.9	0.1	3.1	4	0	0	4	4	3	1	Tetratricopeptide	repeat
TPR_20	PF14561.1	gi|479326827|ref|YP_007866884.1|	-	1.7e-08	34.4	0.3	0.00098	19.1	0.0	3.8	2	1	2	4	4	4	2	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|479326827|ref|YP_007866884.1|	-	2.3e-08	33.9	14.9	0.022	15.2	0.2	5.9	7	0	0	7	7	5	2	Tetratricopeptide	repeat
TPR_10	PF13374.1	gi|479326827|ref|YP_007866884.1|	-	1.2e-05	25.0	4.3	0.17	11.8	0.1	4.5	4	0	0	4	4	4	1	Tetratricopeptide	repeat
Fis1_TPR_C	PF14853.1	gi|479326827|ref|YP_007866884.1|	-	4.8e-05	23.1	19.1	0.038	13.8	0.2	5.4	6	0	0	6	6	6	2	Fis1	C-terminal	tetratricopeptide	repeat
CLTH	PF10607.4	gi|479326827|ref|YP_007866884.1|	-	0.00096	18.8	5.9	0.61	9.7	0.0	3.1	2	1	1	3	3	3	2	CTLH/CRA	C-terminal	to	LisH	motif	domain
MIT	PF04212.13	gi|479326827|ref|YP_007866884.1|	-	0.0038	17.0	16.9	0.28	11.0	0.6	6.0	6	1	1	7	7	7	2	MIT	(microtubule	interacting	and	transport)	domain
TPR_3	PF07720.7	gi|479326827|ref|YP_007866884.1|	-	0.0097	15.6	24.7	0.032	14.0	2.1	6.3	6	0	0	6	6	6	1	Tetratricopeptide	repeat
SHNi-TPR	PF10516.4	gi|479326827|ref|YP_007866884.1|	-	0.012	14.8	0.8	32	3.8	0.0	4.5	5	0	0	5	5	5	0	SHNi-TPR
Phage_term_smal	PF05944.7	gi|479326827|ref|YP_007866884.1|	-	0.02	14.5	0.3	0.19	11.4	0.1	2.5	2	1	1	3	3	3	0	Phage	small	terminase	subunit
RPN7	PF10602.4	gi|479326827|ref|YP_007866884.1|	-	0.04	13.2	14.5	0.29	10.4	1.1	3.2	2	1	1	3	3	3	0	26S	proteasome	subunit	RPN7
HEAT_2	PF13646.1	gi|479326827|ref|YP_007866884.1|	-	0.076	13.3	0.0	1.6	9.0	0.0	2.5	2	1	0	2	2	2	0	HEAT	repeats
Type_III_YscG	PF09477.5	gi|479326827|ref|YP_007866884.1|	-	0.16	12.0	1.4	0.29	11.2	0.0	2.2	4	0	0	4	4	1	0	Bacterial	type	II	secretion	system	chaperone	protein	(type_III_yscG)
Foie-gras_1	PF11817.3	gi|479326827|ref|YP_007866884.1|	-	0.44	9.9	7.6	1.8	8.0	0.6	3.3	3	1	1	4	4	3	0	Foie	gras	liver	health	family	1
GEMIN8	PF15348.1	gi|479326827|ref|YP_007866884.1|	-	0.86	9.6	4.3	0.87	9.5	2.2	1.7	1	1	0	1	1	1	0	Gemini	of	Cajal	bodies-associated	protein	8
YfdX	PF10938.3	gi|479326827|ref|YP_007866884.1|	-	1.3	8.6	4.6	42	3.7	0.0	3.8	5	1	0	5	5	4	0	YfdX	protein
AIRS_C	PF02769.17	gi|479326828|ref|YP_007866885.1|	-	1e-19	71.0	0.1	1.9e-19	70.1	0.0	1.4	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|479326828|ref|YP_007866885.1|	-	3.7e-08	33.5	0.0	6.3e-08	32.7	0.0	1.4	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
DoxX	PF07681.7	gi|479326829|ref|YP_007866886.1|	-	3.3e-12	46.6	4.4	4.3e-12	46.2	3.1	1.2	1	0	0	1	1	1	1	DoxX
DoxX_2	PF13564.1	gi|479326829|ref|YP_007866886.1|	-	1.4e-05	24.9	1.9	1.6e-05	24.7	1.1	1.3	1	1	0	1	1	1	1	DoxX-like	family
CaKB	PF03185.10	gi|479326829|ref|YP_007866886.1|	-	0.15	11.4	1.1	0.21	10.9	0.7	1.2	1	0	0	1	1	1	0	Calcium-activated	potassium	channel,	beta	subunit
PNP_UDP_1	PF01048.15	gi|479326832|ref|YP_007866889.1|	-	1.3e-38	132.2	0.0	1.5e-38	132.0	0.0	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
MFS_1_like	PF12832.2	gi|479326832|ref|YP_007866889.1|	-	0.02	14.6	0.0	0.034	13.9	0.0	1.4	1	0	0	1	1	1	0	MFS_1	like	family
SGL	PF08450.7	gi|479326833|ref|YP_007866890.1|	-	4.7e-83	278.3	0.1	5.4e-83	278.1	0.1	1.0	1	0	0	1	1	1	1	SMP-30/Gluconolaconase/LRE-like	region
Arylesterase	PF01731.15	gi|479326833|ref|YP_007866890.1|	-	6.6e-05	22.8	0.0	0.00014	21.7	0.0	1.5	1	0	0	1	1	1	1	Arylesterase
Reg_prop	PF07494.6	gi|479326833|ref|YP_007866890.1|	-	0.012	15.5	1.5	2.2	8.5	0.1	3.4	3	0	0	3	3	3	0	Two	component	regulator	propeller
Str_synth	PF03088.11	gi|479326833|ref|YP_007866890.1|	-	0.029	14.3	0.0	0.062	13.3	0.0	1.5	1	0	0	1	1	1	0	Strictosidine	synthase
NHL	PF01436.16	gi|479326833|ref|YP_007866890.1|	-	0.032	14.2	0.0	0.35	10.8	0.0	2.9	2	0	0	2	2	2	0	NHL	repeat
Ldl_recept_b	PF00058.12	gi|479326833|ref|YP_007866890.1|	-	0.079	13.2	0.0	0.87	9.9	0.0	2.3	2	0	0	2	2	2	0	Low-density	lipoprotein	receptor	repeat	class	B
MFS_1	PF07690.11	gi|479326834|ref|YP_007866891.1|	-	4.8e-39	134.0	79.8	2.3e-25	89.0	29.6	3.1	1	1	2	3	3	3	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|479326834|ref|YP_007866891.1|	-	1.5e-07	30.4	38.7	3.5e-05	22.5	11.7	2.8	3	0	0	3	3	3	2	Sugar	(and	other)	transporter
MFS_3	PF05977.8	gi|479326834|ref|YP_007866891.1|	-	0.00015	20.0	7.6	0.00057	18.1	1.5	2.4	2	0	0	2	2	2	2	Transmembrane	secretion	effector
DUF2583	PF10762.4	gi|479326834|ref|YP_007866891.1|	-	0.28	11.3	12.0	0.057	13.5	0.9	3.6	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2583)
DUF3139	PF11337.3	gi|479326836|ref|YP_007866893.1|	-	0.067	13.4	0.0	0.067	13.4	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3139)
SoxE	PF06525.6	gi|479326836|ref|YP_007866893.1|	-	0.12	11.6	5.5	0.14	11.4	3.8	1.1	1	0	0	1	1	1	0	Sulfocyanin	(SoxE)
DUF4097	PF13349.1	gi|479326836|ref|YP_007866893.1|	-	0.2	11.1	3.1	0.23	11.0	2.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4097)
TarH	PF02203.10	gi|479326836|ref|YP_007866893.1|	-	0.24	11.2	0.8	0.24	11.2	0.6	1.1	1	0	0	1	1	1	0	Tar	ligand	binding	domain	homologue
IncA	PF04156.9	gi|479326836|ref|YP_007866893.1|	-	3.5	7.1	4.7	4.4	6.8	3.2	1.1	1	0	0	1	1	1	0	IncA	protein
MFS_1	PF07690.11	gi|479326838|ref|YP_007866895.1|	-	9.1e-20	70.6	35.0	4.8e-11	41.9	10.5	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
TENA_THI-4	PF03070.11	gi|479326839|ref|YP_007866896.1|	-	1.7e-38	132.5	0.3	2.3e-38	132.0	0.2	1.1	1	0	0	1	1	1	1	TENA/THI-4/PQQC	family
zf-C2H2	PF00096.21	gi|479326839|ref|YP_007866896.1|	-	0.00091	19.4	0.0	0.0022	18.2	0.0	1.7	1	0	0	1	1	1	1	Zinc	finger,	C2H2	type
zf-C2H2_4	PF13894.1	gi|479326839|ref|YP_007866896.1|	-	0.013	15.8	0.0	0.031	14.5	0.0	1.6	1	0	0	1	1	1	0	C2H2-type	zinc	finger
zf-met	PF12874.2	gi|479326839|ref|YP_007866896.1|	-	0.032	14.4	0.0	0.067	13.4	0.0	1.5	1	0	0	1	1	1	0	Zinc-finger	of	C2H2	type
Acetyltransf_4	PF13420.1	gi|479326839|ref|YP_007866896.1|	-	0.043	13.7	0.1	0.9	9.4	0.0	2.4	2	0	0	2	2	2	0	Acetyltransferase	(GNAT)	domain
Haem_oxygenas_2	PF14518.1	gi|479326839|ref|YP_007866896.1|	-	0.049	13.8	0.0	0.12	12.5	0.0	1.7	1	0	0	1	1	1	0	Iron-containing	redox	enzyme
zf-C2H2_2	PF12756.2	gi|479326839|ref|YP_007866896.1|	-	0.06	13.4	0.1	0.78	9.8	0.0	2.3	2	0	0	2	2	2	0	C2H2	type	zinc-finger	(2	copies)
FeoA	PF04023.9	gi|479326839|ref|YP_007866896.1|	-	0.1	12.5	0.0	0.2	11.6	0.0	1.4	1	0	0	1	1	1	0	FeoA	domain
Ta0938	PF11494.3	gi|479326840|ref|YP_007866897.1|	-	8.2e-62	205.9	6.0	9e-62	205.7	4.1	1.0	1	0	0	1	1	1	1	Ta0938
AGT	PF11440.3	gi|479326840|ref|YP_007866897.1|	-	0.025	13.4	0.0	0.03	13.1	0.0	1.1	1	0	0	1	1	1	0	DNA	alpha-glucosyltransferase
YHS	PF04945.8	gi|479326840|ref|YP_007866897.1|	-	0.13	12.0	2.2	0.14	12.0	0.5	1.7	2	0	0	2	2	2	0	YHS	domain
zf-H2C2_2	PF13465.1	gi|479326840|ref|YP_007866897.1|	-	0.33	11.3	0.2	0.33	11.3	0.1	1.7	2	0	0	2	2	2	0	Zinc-finger	double	domain
DUF35_N	PF12172.3	gi|479326841|ref|YP_007866898.1|	-	3.7e-06	26.6	1.1	1.8e-05	24.5	0.5	2.0	2	0	0	2	2	2	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
TF_Zn_Ribbon	PF08271.7	gi|479326841|ref|YP_007866898.1|	-	0.038	13.3	3.0	3.9	6.8	0.3	2.3	2	0	0	2	2	2	0	TFIIB	zinc-binding
HypA	PF01155.14	gi|479326841|ref|YP_007866898.1|	-	0.039	13.6	0.5	0.055	13.1	0.1	1.4	2	0	0	2	2	2	0	Hydrogenase	expression/synthesis	hypA	family
A2L_zn_ribbon	PF08792.5	gi|479326841|ref|YP_007866898.1|	-	0.048	13.1	0.2	0.048	13.1	0.2	2.4	3	0	0	3	3	3	0	A2L	zinc	ribbon	domain
FdhE	PF04216.7	gi|479326841|ref|YP_007866898.1|	-	0.17	11.5	0.8	0.2	11.3	0.6	1.1	1	0	0	1	1	1	0	Protein	involved	in	formate	dehydrogenase	formation
zinc_ribbon_5	PF13719.1	gi|479326841|ref|YP_007866898.1|	-	0.19	11.3	4.2	16	5.1	2.9	2.5	1	1	1	2	2	2	0	zinc-ribbon	domain
Zn_ribbon_recom	PF13408.1	gi|479326841|ref|YP_007866898.1|	-	0.24	11.7	3.5	0.74	10.1	2.4	1.9	1	1	0	1	1	1	0	Recombinase	zinc	beta	ribbon	domain
zf-C3HC4_3	PF13920.1	gi|479326841|ref|YP_007866898.1|	-	0.24	11.1	4.0	0.11	12.2	0.9	1.7	2	0	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
zinc_ribbon_4	PF13717.1	gi|479326841|ref|YP_007866898.1|	-	0.26	10.9	4.5	21	4.9	3.1	2.5	1	1	0	1	1	1	0	zinc-ribbon	domain
TFIIS_C	PF01096.13	gi|479326841|ref|YP_007866898.1|	-	0.27	10.9	4.7	2	8.1	0.6	2.4	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
DZR	PF12773.2	gi|479326841|ref|YP_007866898.1|	-	0.31	10.9	3.7	0.17	11.7	0.6	1.9	2	0	0	2	2	2	0	Double	zinc	ribbon
UPF0547	PF10571.4	gi|479326841|ref|YP_007866898.1|	-	0.5	10.1	4.9	2.5	7.8	0.4	2.4	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
DUF2082	PF09855.4	gi|479326841|ref|YP_007866898.1|	-	0.53	10.1	3.7	13	5.6	0.5	2.3	1	1	1	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
Zn-ribbon_8	PF09723.5	gi|479326841|ref|YP_007866898.1|	-	0.72	9.8	4.5	7.3	6.6	3.1	2.2	1	1	0	1	1	1	0	Zinc	ribbon	domain
zf-C2H2	PF00096.21	gi|479326841|ref|YP_007866898.1|	-	1.9	8.9	6.5	3.6	8.1	1.2	2.5	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
zf-ribbon_3	PF13248.1	gi|479326841|ref|YP_007866898.1|	-	2.2	7.5	5.1	3.6	6.9	0.1	2.6	3	0	0	3	3	3	0	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.2	gi|479326841|ref|YP_007866898.1|	-	3.5	7.4	7.0	1.5	8.6	0.5	2.3	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
zf-C3HC4_2	PF13923.1	gi|479326841|ref|YP_007866898.1|	-	5.2	7.1	6.0	2.5	8.1	2.3	1.9	2	0	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
Thiolase_C	PF02803.13	gi|479326842|ref|YP_007866899.1|	-	3e-05	23.4	0.5	6.4e-05	22.3	0.1	1.7	2	0	0	2	2	2	1	Thiolase,	C-terminal	domain
Thiolase_N	PF00108.18	gi|479326842|ref|YP_007866899.1|	-	0.00015	20.8	0.2	0.0021	17.1	0.0	2.2	2	0	0	2	2	2	1	Thiolase,	N-terminal	domain
ACP_syn_III	PF08545.5	gi|479326842|ref|YP_007866899.1|	-	0.0018	17.8	0.3	0.079	12.6	0.1	2.7	3	0	0	3	3	3	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
DUF2194	PF09960.4	gi|479326842|ref|YP_007866899.1|	-	0.011	13.8	0.1	0.016	13.2	0.1	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2194)
GYD	PF08734.6	gi|479326843|ref|YP_007866900.1|	-	3.2e-26	90.8	0.1	3.5e-26	90.7	0.1	1.0	1	0	0	1	1	1	1	GYD	domain
AsnC_trans_reg	PF01037.16	gi|479326843|ref|YP_007866900.1|	-	0.00016	21.3	0.2	0.00029	20.4	0.1	1.5	1	1	0	1	1	1	1	AsnC	family
UBN2	PF14223.1	gi|479326843|ref|YP_007866900.1|	-	0.075	12.8	0.1	0.12	12.1	0.1	1.6	1	1	0	1	1	1	0	gag-polypeptide	of	LTR	copia-type
Peptidase_M48	PF01435.13	gi|479326844|ref|YP_007866901.1|	-	3e-21	76.0	0.0	6.4e-21	74.9	0.0	1.5	1	1	0	1	1	1	1	Peptidase	family	M48
Peptidase_M56	PF05569.6	gi|479326844|ref|YP_007866901.1|	-	0.0024	16.9	4.3	0.0028	16.6	0.8	2.0	1	1	1	2	2	2	1	BlaR1	peptidase	M56
Pex24p	PF06398.6	gi|479326844|ref|YP_007866901.1|	-	0.12	11.1	3.7	0.031	13.0	0.8	1.5	2	0	0	2	2	2	0	Integral	peroxisomal	membrane	peroxin
YbhQ	PF11076.3	gi|479326844|ref|YP_007866901.1|	-	0.16	11.5	1.7	0.28	10.8	0.3	1.8	2	0	0	2	2	2	0	Putative	inner	membrane	protein	YbhQ
SprT-like	PF10263.4	gi|479326844|ref|YP_007866901.1|	-	0.17	11.5	0.0	0.24	11.0	0.0	1.2	1	0	0	1	1	1	0	SprT-like	family
Peptidase_S9	PF00326.16	gi|479326845|ref|YP_007866902.1|	-	3.1e-49	167.0	0.0	4.3e-49	166.6	0.0	1.2	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
Abhydrolase_5	PF12695.2	gi|479326845|ref|YP_007866902.1|	-	2.2e-10	40.4	0.0	3.5e-10	39.7	0.0	1.3	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Peptidase_S15	PF02129.13	gi|479326845|ref|YP_007866902.1|	-	8.8e-08	31.8	0.3	8.6e-05	22.0	0.4	2.3	1	1	0	2	2	2	2	X-Pro	dipeptidyl-peptidase	(S15	family)
Abhydrolase_6	PF12697.2	gi|479326845|ref|YP_007866902.1|	-	1.4e-07	31.6	0.0	5e-06	26.5	0.0	2.3	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
DLH	PF01738.13	gi|479326845|ref|YP_007866902.1|	-	9.1e-06	25.1	0.0	0.00014	21.1	0.0	2.0	2	0	0	2	2	2	1	Dienelactone	hydrolase	family
FSH1	PF03959.8	gi|479326845|ref|YP_007866902.1|	-	0.00071	19.0	0.0	0.0013	18.2	0.0	1.3	1	0	0	1	1	1	1	Serine	hydrolase	(FSH1)
Abhydrolase_2	PF02230.11	gi|479326845|ref|YP_007866902.1|	-	0.0014	18.1	0.1	0.0055	16.1	0.0	1.9	2	0	0	2	2	2	1	Phospholipase/Carboxylesterase
Abhydrolase_1	PF00561.15	gi|479326845|ref|YP_007866902.1|	-	0.0066	16.0	0.0	0.031	13.8	0.0	1.8	1	1	0	2	2	2	1	alpha/beta	hydrolase	fold
Peptidase_S28	PF05577.7	gi|479326845|ref|YP_007866902.1|	-	0.045	12.3	0.1	0.11	11.0	0.0	1.6	2	0	0	2	2	2	0	Serine	carboxypeptidase	S28
CBS	PF00571.23	gi|479326846|ref|YP_007866903.1|	-	8.2e-24	83.1	2.6	3.2e-11	42.8	0.3	2.1	2	0	0	2	2	2	2	CBS	domain
ABC2_membrane_3	PF12698.2	gi|479326846|ref|YP_007866903.1|	-	0.062	12.3	0.0	0.063	12.3	0.0	1.1	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
SporV_AA	PF12164.3	gi|479326846|ref|YP_007866903.1|	-	0.085	12.8	0.9	0.15	12.0	0.6	1.5	1	0	0	1	1	1	0	Stage	V	sporulation	protein	AA
Rad50_zn_hook	PF04423.9	gi|479326847|ref|YP_007866904.1|	-	0.0032	16.8	0.0	0.0032	16.8	0.0	2.3	3	0	0	3	3	3	1	Rad50	zinc	hook	motif
DUF1610	PF07754.6	gi|479326847|ref|YP_007866904.1|	-	0.026	14.6	0.5	0.063	13.4	0.3	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1610)
FeThRed_B	PF02943.10	gi|479326847|ref|YP_007866904.1|	-	0.13	12.0	0.1	0.22	11.2	0.1	1.4	1	0	0	1	1	1	0	Ferredoxin	thioredoxin	reductase	catalytic	beta	chain
Pyr_redox_2	PF07992.9	gi|479326848|ref|YP_007866905.1|	-	3.2e-38	131.6	5.7	5.9e-36	124.2	4.0	3.4	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|479326848|ref|YP_007866905.1|	-	1.8e-29	101.9	0.3	3.3e-29	101.1	0.2	1.5	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.22	gi|479326848|ref|YP_007866905.1|	-	2.8e-12	46.8	1.9	3.5e-12	46.5	0.0	2.3	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|479326848|ref|YP_007866905.1|	-	1.2e-10	41.8	0.0	8.3e-06	25.9	0.0	2.6	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|479326848|ref|YP_007866905.1|	-	3.2e-10	39.4	11.0	1.2e-05	24.3	2.0	4.0	2	2	0	3	3	3	3	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.9	gi|479326848|ref|YP_007866905.1|	-	9.3e-06	24.3	1.0	0.021	13.3	0.0	3.1	3	0	0	3	3	3	2	HI0933-like	protein
FAD_binding_2	PF00890.19	gi|479326848|ref|YP_007866905.1|	-	0.00062	18.7	4.0	0.39	9.4	0.0	2.4	2	0	0	2	2	2	2	FAD	binding	domain
DAO	PF01266.19	gi|479326848|ref|YP_007866905.1|	-	0.0042	16.0	2.6	0.19	10.5	0.0	2.5	3	0	0	3	3	3	2	FAD	dependent	oxidoreductase
FAD_oxidored	PF12831.2	gi|479326848|ref|YP_007866905.1|	-	0.0054	15.8	0.0	0.013	14.5	0.0	1.6	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
NAD_binding_9	PF13454.1	gi|479326848|ref|YP_007866905.1|	-	0.041	13.6	0.7	0.82	9.4	0.0	2.9	3	0	0	3	3	3	0	FAD-NAD(P)-binding
zf-FCS	PF06467.9	gi|479326849|ref|YP_007866906.1|	-	5.9e-08	32.2	3.3	1e-07	31.4	2.3	1.4	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
ATPase-cat_bd	PF12156.3	gi|479326849|ref|YP_007866906.1|	-	0.00012	22.5	4.9	0.00012	22.5	3.4	1.7	1	1	1	2	2	2	1	Putative	metal-binding	domain	of	cation	transport	ATPase
Ta0938	PF11494.3	gi|479326849|ref|YP_007866906.1|	-	0.00051	20.1	0.8	0.00052	20.1	0.6	1.1	1	0	0	1	1	1	1	Ta0938
YHS	PF04945.8	gi|479326849|ref|YP_007866906.1|	-	0.0011	18.8	1.7	0.0015	18.3	1.2	1.2	1	0	0	1	1	1	1	YHS	domain
zinc_ribbon_2	PF13240.1	gi|479326849|ref|YP_007866906.1|	-	0.0016	17.8	3.9	0.0039	16.6	2.6	1.8	1	1	0	1	1	1	1	zinc-ribbon	domain
Arc_trans_TRASH	PF08394.5	gi|479326849|ref|YP_007866906.1|	-	0.0029	17.7	4.3	0.0049	16.9	3.0	1.5	1	0	0	1	1	1	1	Archaeal	TRASH	domain
Zn_ribbon_recom	PF13408.1	gi|479326849|ref|YP_007866906.1|	-	0.015	15.5	4.4	0.016	15.4	3.1	1.2	1	0	0	1	1	1	0	Recombinase	zinc	beta	ribbon	domain
zf-ribbon_3	PF13248.1	gi|479326849|ref|YP_007866906.1|	-	0.02	14.0	0.1	0.02	14.0	0.1	2.2	1	1	1	2	2	2	0	zinc-ribbon	domain
NinF	PF05810.7	gi|479326849|ref|YP_007866906.1|	-	0.027	14.2	6.1	0.73	9.6	4.2	2.2	1	1	0	1	1	1	0	NinF	protein
zf-H2C2_2	PF13465.1	gi|479326849|ref|YP_007866906.1|	-	0.051	13.8	2.6	2.2	8.7	0.7	2.3	2	0	0	2	2	2	0	Zinc-finger	double	domain
Zn_ribbon_2	PF12674.2	gi|479326849|ref|YP_007866906.1|	-	0.054	13.8	2.5	0.063	13.6	1.7	1.1	1	0	0	1	1	1	0	Putative	zinc	ribbon	domain
DUF3781	PF12636.2	gi|479326849|ref|YP_007866906.1|	-	0.067	13.1	0.2	0.079	12.9	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3781)
zf-FPG_IleRS	PF06827.9	gi|479326849|ref|YP_007866906.1|	-	0.096	12.3	5.8	0.92	9.2	3.3	2.4	1	1	1	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
DUF3268	PF11672.3	gi|479326849|ref|YP_007866906.1|	-	0.097	12.7	1.5	0.12	12.5	1.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3268)
DNA_RNApol_7kD	PF03604.8	gi|479326849|ref|YP_007866906.1|	-	0.15	11.5	3.6	0.35	10.3	0.0	2.2	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
DUF4193	PF13834.1	gi|479326849|ref|YP_007866906.1|	-	0.2	11.8	3.1	0.42	10.8	2.1	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4193)
DZR	PF12773.2	gi|479326849|ref|YP_007866906.1|	-	0.23	11.2	6.8	0.67	9.8	4.7	1.8	1	1	0	1	1	1	0	Double	zinc	ribbon
LIM	PF00412.17	gi|479326849|ref|YP_007866906.1|	-	0.87	9.7	10.0	10	6.3	6.8	2.0	1	1	0	1	1	1	0	LIM	domain
DRP	PF06044.7	gi|479326849|ref|YP_007866906.1|	-	1	8.3	3.8	1	8.3	2.6	1.0	1	0	0	1	1	1	0	Dam-replacing	family
HypA	PF01155.14	gi|479326849|ref|YP_007866906.1|	-	1.1	8.9	7.8	1.3	8.7	2.6	1.9	1	1	1	2	2	2	0	Hydrogenase	expression/synthesis	hypA	family
RNHCP	PF12647.2	gi|479326849|ref|YP_007866906.1|	-	1.3	8.8	6.4	1.9	8.3	4.5	1.3	1	1	0	1	1	1	0	RNHCP	domain
Zn-ribbon_8	PF09723.5	gi|479326849|ref|YP_007866906.1|	-	2.9	7.9	0.0	2.9	7.9	0.0	2.1	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-C3HC4_3	PF13920.1	gi|479326849|ref|YP_007866906.1|	-	4.6	6.9	9.3	19	4.9	6.5	1.9	1	1	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
Evr1_Alr	PF04777.8	gi|479326849|ref|YP_007866906.1|	-	9.4	6.2	6.8	3.6	7.5	1.4	2.0	1	1	1	2	2	2	0	Erv1	/	Alr	family
Yippee-Mis18	PF03226.9	gi|479326851|ref|YP_007866908.1|	-	0.076	13.0	0.2	0.093	12.7	0.1	1.1	1	0	0	1	1	1	0	Yippee	zinc-binding/DNA-binding	/Mis18,	centromere	assembly
DUF504	PF04457.7	gi|479326852|ref|YP_007866909.1|	-	2.7e-17	62.6	0.1	4e-17	62.1	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF504)
zf-ribbon_3	PF13248.1	gi|479326853|ref|YP_007866910.1|	-	1.7e-08	33.4	3.6	2.5e-08	32.8	2.5	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|479326853|ref|YP_007866910.1|	-	8.1e-07	28.3	2.5	1.1e-06	27.8	1.7	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|479326853|ref|YP_007866910.1|	-	2.1e-05	24.2	1.0	3e-05	23.7	0.7	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-RanBP	PF00641.13	gi|479326853|ref|YP_007866910.1|	-	0.0034	16.4	0.3	0.0048	15.9	0.2	1.2	1	0	0	1	1	1	1	Zn-finger	in	Ran	binding	protein	and	others
UPF0547	PF10571.4	gi|479326853|ref|YP_007866910.1|	-	0.038	13.6	4.1	0.093	12.4	2.8	1.6	1	1	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
Nudix_N_2	PF14803.1	gi|479326853|ref|YP_007866910.1|	-	0.052	13.2	2.1	1.4	8.6	0.1	2.2	2	0	0	2	2	2	0	Nudix	N-terminal
MerE	PF05052.7	gi|479326853|ref|YP_007866910.1|	-	0.085	12.8	3.9	0.55	10.2	0.2	2.4	2	0	0	2	2	2	0	MerE	protein
DUF4191	PF13829.1	gi|479326853|ref|YP_007866910.1|	-	0.31	10.1	12.0	1.3	8.0	1.8	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4191)
Rax2	PF12768.2	gi|479326853|ref|YP_007866910.1|	-	1.1	8.4	5.1	0.52	9.4	1.8	1.6	1	1	1	2	2	2	0	Cortical	protein	marker	for	cell	polarity
Rieske	PF00355.21	gi|479326856|ref|YP_007866913.1|	-	9.6e-10	37.9	0.0	1.1e-09	37.7	0.0	1.1	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Rieske_2	PF13806.1	gi|479326856|ref|YP_007866913.1|	-	0.00053	19.6	0.0	0.00062	19.4	0.0	1.1	1	0	0	1	1	1	1	Rieske-like	[2Fe-2S]	domain
QueC	PF06508.8	gi|479326857|ref|YP_007866914.1|	-	2.4e-25	89.0	0.1	5.8e-24	84.5	0.1	2.0	1	1	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
ThiI	PF02568.9	gi|479326857|ref|YP_007866914.1|	-	0.00043	19.8	0.0	0.00073	19.0	0.0	1.4	1	1	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
Asn_synthase	PF00733.16	gi|479326857|ref|YP_007866914.1|	-	0.0026	17.3	0.0	0.0039	16.7	0.0	1.2	1	0	0	1	1	1	1	Asparagine	synthase
OppC_N	PF12911.2	gi|479326858|ref|YP_007866915.1|	-	0.13	11.6	4.0	0.068	12.5	0.9	2.0	2	0	0	2	2	2	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
PaREP1	PF05942.6	gi|479326859|ref|YP_007866916.1|	-	1.4e-31	108.7	3.0	1.6e-31	108.5	2.1	1.0	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
HEPN	PF05168.9	gi|479326859|ref|YP_007866916.1|	-	0.00021	21.1	3.3	0.00058	19.7	2.3	1.8	1	1	0	1	1	1	1	HEPN	domain
DUF357	PF04010.8	gi|479326859|ref|YP_007866916.1|	-	0.00029	20.4	1.4	0.0045	16.6	0.0	2.5	2	1	1	3	3	3	1	Protein	of	unknown	function	(DUF357)
DUF2603	PF10788.4	gi|479326859|ref|YP_007866916.1|	-	0.066	12.9	1.8	0.086	12.6	1.3	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2603)
TPR_11	PF13414.1	gi|479326859|ref|YP_007866916.1|	-	0.11	12.2	1.0	0.18	11.5	0.3	1.7	2	0	0	2	2	2	0	TPR	repeat
Aida_N	PF08910.5	gi|479326859|ref|YP_007866916.1|	-	0.11	12.7	0.3	1.3	9.2	0.1	2.1	2	1	0	2	2	2	0	Aida	N-terminus
PaREP1	PF05942.6	gi|479326860|ref|YP_007866917.1|	-	7.8e-29	99.8	2.1	9.4e-29	99.6	1.5	1.1	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
DUF357	PF04010.8	gi|479326860|ref|YP_007866917.1|	-	6.1e-05	22.6	2.4	0.0056	16.3	0.0	2.9	3	0	0	3	3	3	2	Protein	of	unknown	function	(DUF357)
HEPN	PF05168.9	gi|479326860|ref|YP_007866917.1|	-	0.00099	18.9	4.3	0.0049	16.7	3.0	2.1	1	1	0	1	1	1	1	HEPN	domain
DUF2312	PF10073.4	gi|479326860|ref|YP_007866917.1|	-	0.0017	17.6	1.6	0.0091	15.3	0.0	2.3	2	0	0	2	2	2	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2312)
TPR_11	PF13414.1	gi|479326860|ref|YP_007866917.1|	-	0.0051	16.4	0.9	0.011	15.3	0.6	1.6	1	0	0	1	1	1	1	TPR	repeat
ComA	PF02679.10	gi|479326860|ref|YP_007866917.1|	-	0.028	13.4	0.4	0.032	13.2	0.3	1.1	1	0	0	1	1	1	0	(2R)-phospho-3-sulfolactate	synthase	(ComA)
SRP54_N	PF02881.14	gi|479326861|ref|YP_007866918.1|	-	0.00031	20.7	5.2	0.0071	16.4	0.6	2.5	2	0	0	2	2	2	2	SRP54-type	protein,	helical	bundle	domain
ATP-cone	PF03477.11	gi|479326861|ref|YP_007866918.1|	-	0.0059	17.0	1.3	0.021	15.2	0.3	2.0	2	0	0	2	2	2	1	ATP	cone	domain
Pox_A6	PF04924.7	gi|479326861|ref|YP_007866918.1|	-	0.043	12.6	0.3	0.057	12.2	0.2	1.3	1	0	0	1	1	1	0	Poxvirus	A6	protein
MADF_DNA_bdg	PF10545.4	gi|479326861|ref|YP_007866918.1|	-	0.1	12.8	0.5	1.2	9.3	0.1	2.3	2	1	0	2	2	2	0	Alcohol	dehydrogenase	transcription	factor	Myb/SANT-like
Rota_NSP4	PF01452.11	gi|479326861|ref|YP_007866918.1|	-	0.63	9.3	4.1	0.56	9.5	0.2	2.2	2	1	0	2	2	2	0	Rotavirus	non	structural	protein
Spore_III_AF	PF09581.5	gi|479326861|ref|YP_007866918.1|	-	2.8	7.7	8.1	1.8	8.4	3.0	2.2	2	1	0	2	2	2	0	Stage	III	sporulation	protein	AF	(Spore_III_AF)
UPF0126	PF03458.8	gi|479326862|ref|YP_007866919.1|	-	0.024	14.2	0.2	0.12	12.0	0.1	1.8	1	1	1	2	2	2	0	UPF0126	domain
Peptidase_M1	PF01433.15	gi|479326863|ref|YP_007866920.1|	-	3.8e-106	355.4	0.0	5.7e-106	354.8	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	M1
ERAP1_C	PF11838.3	gi|479326863|ref|YP_007866920.1|	-	6.8e-25	87.9	0.6	2.2e-24	86.3	0.0	1.9	2	0	0	2	2	2	1	ERAP1-like	C-terminal	domain
Peptidase_MA_2	PF13485.1	gi|479326863|ref|YP_007866920.1|	-	5.4e-19	68.5	1.5	8.8e-19	67.8	0.6	1.6	2	0	0	2	2	2	1	Peptidase	MA	superfamily
DUF608	PF04685.8	gi|479326864|ref|YP_007866921.1|	-	2.2e-87	293.1	0.5	2.9e-87	292.7	0.3	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF608
GBA2_N	PF12215.3	gi|479326864|ref|YP_007866921.1|	-	8.8e-51	172.8	0.0	1.6e-50	171.9	0.0	1.4	2	0	0	2	2	2	1	beta-Glucocerebrosidase	2	N	terminal
Bac_rhamnosid	PF05592.6	gi|479326864|ref|YP_007866921.1|	-	0.00055	18.2	0.2	0.00082	17.7	0.1	1.1	1	0	0	1	1	1	1	Bacterial	alpha-L-rhamnosidase
Aldolase_2	PF10120.4	gi|479326864|ref|YP_007866921.1|	-	0.1	12.0	0.0	0.31	10.3	0.0	1.8	2	0	0	2	2	2	0	Putative	aldolase
Amidohydro_1	PF01979.15	gi|479326865|ref|YP_007866922.1|	-	8.1e-17	61.8	0.5	4.4e-16	59.4	0.3	1.9	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|479326865|ref|YP_007866922.1|	-	4e-11	42.5	0.2	8.1e-11	41.5	0.2	1.5	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_4	PF13147.1	gi|479326865|ref|YP_007866922.1|	-	8.1e-11	42.4	0.0	3e-06	27.4	0.0	2.2	2	0	0	2	2	2	2	Amidohydrolase
Amidohydro_3	PF07969.6	gi|479326865|ref|YP_007866922.1|	-	4e-07	29.5	0.0	0.0051	16.0	0.0	2.2	2	0	0	2	2	2	2	Amidohydrolase	family
ABC_tran	PF00005.22	gi|479326866|ref|YP_007866923.1|	-	2e-30	105.8	0.0	2.7e-30	105.4	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|479326866|ref|YP_007866923.1|	-	1.3e-15	57.4	0.0	2.5e-15	56.5	0.0	1.5	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|479326866|ref|YP_007866923.1|	-	3.5e-08	33.7	0.7	0.00043	20.3	0.3	2.3	1	1	1	2	2	2	2	AAA	domain
AAA_22	PF13401.1	gi|479326866|ref|YP_007866923.1|	-	0.00031	20.8	1.0	0.0044	17.1	0.7	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|479326866|ref|YP_007866923.1|	-	0.0016	18.4	0.0	0.0027	17.7	0.0	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
UPF0079	PF02367.12	gi|479326866|ref|YP_007866923.1|	-	0.016	14.8	0.0	0.027	14.0	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
DUF258	PF03193.11	gi|479326866|ref|YP_007866923.1|	-	0.028	13.6	0.1	0.047	12.8	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_13	PF13166.1	gi|479326866|ref|YP_007866923.1|	-	0.057	11.8	0.3	2.2	6.6	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
PEPCK_ATP	PF01293.15	gi|479326866|ref|YP_007866923.1|	-	0.072	11.5	0.0	0.098	11.1	0.0	1.1	1	0	0	1	1	1	0	Phosphoenolpyruvate	carboxykinase
AAA_29	PF13555.1	gi|479326866|ref|YP_007866923.1|	-	0.098	12.1	0.0	0.23	11.0	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
ABC_tran	PF00005.22	gi|479326867|ref|YP_007866924.1|	-	1.3e-28	99.9	0.0	2e-28	99.4	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|479326867|ref|YP_007866924.1|	-	6.3e-15	55.2	0.0	1.1e-14	54.5	0.0	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|479326867|ref|YP_007866924.1|	-	1e-14	55.1	3.6	8.3e-10	39.0	0.2	2.2	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|479326867|ref|YP_007866924.1|	-	9.6e-08	31.5	2.2	0.0003	20.0	0.1	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|479326867|ref|YP_007866924.1|	-	1.4e-07	30.8	1.3	0.00089	18.4	0.3	2.2	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_29	PF13555.1	gi|479326867|ref|YP_007866924.1|	-	1.4e-06	27.7	0.1	2.5e-06	26.8	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.1	gi|479326867|ref|YP_007866924.1|	-	5.9e-05	23.1	0.0	9.5e-05	22.4	0.0	1.4	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_10	PF12846.2	gi|479326867|ref|YP_007866924.1|	-	0.0002	20.9	0.0	0.0026	17.2	0.0	2.2	1	1	0	1	1	1	1	AAA-like	domain
MMR_HSR1	PF01926.18	gi|479326867|ref|YP_007866924.1|	-	0.00025	20.9	0.1	0.00062	19.6	0.1	1.7	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
AAA_22	PF13401.1	gi|479326867|ref|YP_007866924.1|	-	0.00034	20.7	0.2	0.0026	17.9	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|479326867|ref|YP_007866924.1|	-	0.00093	18.4	0.1	0.0016	17.6	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_23	PF13476.1	gi|479326867|ref|YP_007866924.1|	-	0.0021	18.3	0.0	0.0049	17.2	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
ArgK	PF03308.11	gi|479326867|ref|YP_007866924.1|	-	0.0027	16.5	0.1	0.0043	15.8	0.1	1.2	1	0	0	1	1	1	1	ArgK	protein
ABC_ATPase	PF09818.4	gi|479326867|ref|YP_007866924.1|	-	0.0035	15.9	0.8	1.2	7.6	0.0	2.3	2	1	0	2	2	2	2	Predicted	ATPase	of	the	ABC	class
MobB	PF03205.9	gi|479326867|ref|YP_007866924.1|	-	0.006	16.2	0.1	0.012	15.3	0.1	1.5	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
FtsK_SpoIIIE	PF01580.13	gi|479326867|ref|YP_007866924.1|	-	0.0099	15.3	0.0	0.017	14.5	0.0	1.3	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
DUF87	PF01935.12	gi|479326867|ref|YP_007866924.1|	-	0.017	14.9	0.2	0.055	13.2	0.0	1.8	2	1	0	2	2	2	0	Domain	of	unknown	function	DUF87
AAA_17	PF13207.1	gi|479326867|ref|YP_007866924.1|	-	0.021	15.6	0.0	0.046	14.5	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
NB-ARC	PF00931.17	gi|479326867|ref|YP_007866924.1|	-	0.029	13.2	0.0	0.046	12.5	0.0	1.3	1	0	0	1	1	1	0	NB-ARC	domain
IIGP	PF05049.8	gi|479326867|ref|YP_007866924.1|	-	0.03	13.1	0.1	0.051	12.3	0.1	1.3	1	0	0	1	1	1	0	Interferon-inducible	GTPase	(IIGP)
NACHT	PF05729.7	gi|479326867|ref|YP_007866924.1|	-	0.03	13.9	0.0	0.085	12.5	0.0	1.8	2	0	0	2	2	1	0	NACHT	domain
AAA_19	PF13245.1	gi|479326867|ref|YP_007866924.1|	-	0.031	14.0	0.1	0.069	12.9	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_18	PF13238.1	gi|479326867|ref|YP_007866924.1|	-	0.037	14.3	0.0	0.097	12.9	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
Dynamin_N	PF00350.18	gi|479326867|ref|YP_007866924.1|	-	0.038	13.8	0.0	0.075	12.8	0.0	1.5	1	0	0	1	1	1	0	Dynamin	family
PIF1	PF05970.9	gi|479326867|ref|YP_007866924.1|	-	0.042	12.8	0.2	0.09	11.7	0.0	1.6	2	0	0	2	2	2	0	PIF1-like	helicase
NTPase_1	PF03266.10	gi|479326867|ref|YP_007866924.1|	-	0.042	13.5	0.1	0.095	12.3	0.1	1.6	1	0	0	1	1	1	0	NTPase
T2SE	PF00437.15	gi|479326867|ref|YP_007866924.1|	-	0.045	12.6	0.0	0.086	11.7	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
Arch_ATPase	PF01637.13	gi|479326867|ref|YP_007866924.1|	-	0.056	13.1	0.1	0.11	12.1	0.1	1.7	1	1	0	1	1	1	0	Archaeal	ATPase
Miro	PF08477.8	gi|479326867|ref|YP_007866924.1|	-	0.062	13.8	0.1	0.12	12.8	0.1	1.4	1	0	0	1	1	1	0	Miro-like	protein
AAA_30	PF13604.1	gi|479326867|ref|YP_007866924.1|	-	0.083	12.4	0.0	0.15	11.5	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
cobW	PF02492.14	gi|479326867|ref|YP_007866924.1|	-	0.087	12.2	0.1	0.14	11.5	0.1	1.3	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_25	PF13481.1	gi|479326867|ref|YP_007866924.1|	-	0.11	11.9	0.1	0.38	10.1	0.0	1.9	2	1	0	2	2	2	0	AAA	domain
KAP_NTPase	PF07693.9	gi|479326867|ref|YP_007866924.1|	-	0.11	11.4	0.0	0.18	10.7	0.0	1.5	2	1	0	2	2	2	0	KAP	family	P-loop	domain
AAA	PF00004.24	gi|479326867|ref|YP_007866924.1|	-	0.12	12.5	0.1	1.3	9.2	0.1	2.2	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
IstB_IS21	PF01695.12	gi|479326867|ref|YP_007866924.1|	-	0.13	11.6	0.1	0.46	9.8	0.0	1.8	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
DUF815	PF05673.8	gi|479326867|ref|YP_007866924.1|	-	0.15	11.0	0.0	0.25	10.2	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
AAA_33	PF13671.1	gi|479326867|ref|YP_007866924.1|	-	0.17	11.7	0.0	0.26	11.1	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
BPD_transp_1	PF00528.17	gi|479326868|ref|YP_007866925.1|	-	4.8e-22	78.3	15.9	4.8e-22	78.3	11.0	2.0	2	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.2	gi|479326868|ref|YP_007866925.1|	-	0.0018	17.6	0.1	0.0018	17.6	0.1	2.8	3	0	0	3	3	3	1	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
UPF0126	PF03458.8	gi|479326868|ref|YP_007866925.1|	-	0.0028	17.2	4.9	0.0028	17.2	3.4	2.6	3	0	0	3	3	3	1	UPF0126	domain
TRAM_LAG1_CLN8	PF03798.11	gi|479326868|ref|YP_007866925.1|	-	0.27	10.7	6.1	0.54	9.7	4.2	1.7	1	1	0	1	1	1	0	TLC	domain
SBP_bac_5	PF00496.17	gi|479326869|ref|YP_007866926.1|	-	5.2e-40	137.4	7.6	7.3e-40	136.9	5.3	1.2	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
Rifin_STEVOR	PF02009.11	gi|479326869|ref|YP_007866926.1|	-	1.1	8.8	10.9	1.8	8.1	7.5	1.3	1	0	0	1	1	1	0	Rifin/stevor	family
Shisa	PF13908.1	gi|479326869|ref|YP_007866926.1|	-	5.9	7.0	6.3	13	5.8	4.4	1.6	1	0	0	1	1	1	0	Wnt	and	FGF	inhibitory	regulator
Adeno_E3_CR2	PF02439.10	gi|479326869|ref|YP_007866926.1|	-	8.5	6.0	14.0	18	4.9	9.7	1.6	1	0	0	1	1	1	0	Adenovirus	E3	region	protein	CR2
BPD_transp_1	PF00528.17	gi|479326870|ref|YP_007866927.1|	-	1.1e-34	119.6	13.0	1.1e-34	119.6	9.0	2.2	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
DUF2897	PF11446.3	gi|479326870|ref|YP_007866927.1|	-	0.0027	17.5	0.8	0.0027	17.5	0.6	2.0	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2897)
YtpI	PF14007.1	gi|479326871|ref|YP_007866928.1|	-	0.025	14.4	2.2	0.026	14.4	1.5	1.1	1	0	0	1	1	1	0	YtpI-like	protein
Tmemb_14	PF03647.8	gi|479326871|ref|YP_007866928.1|	-	0.18	12.1	2.6	0.19	12.1	1.8	1.1	1	0	0	1	1	1	0	Transmembrane	proteins	14C
DUF202	PF02656.10	gi|479326871|ref|YP_007866928.1|	-	1.1	9.4	3.6	1.6	9.0	2.5	1.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF202)
SdpI	PF13630.1	gi|479326871|ref|YP_007866928.1|	-	2.4	7.9	6.7	2.7	7.7	4.7	1.1	1	0	0	1	1	1	0	SdpI/YhfL	protein	family
DUF1894	PF08979.6	gi|479326873|ref|YP_007866930.1|	-	0.24	11.4	0.8	0.69	9.9	0.1	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF1894)
MacB_PCD	PF12704.2	gi|479326873|ref|YP_007866930.1|	-	4.9	6.6	6.9	9.3	5.7	0.1	2.2	1	1	0	2	2	2	0	MacB-like	periplasmic	core	domain
MR_MLE_C	PF13378.1	gi|479326874|ref|YP_007866931.1|	-	1.3e-23	83.0	0.0	2.3e-23	82.3	0.0	1.4	1	0	0	1	1	1	1	Enolase	C-terminal	domain-like
MR_MLE_N	PF02746.11	gi|479326874|ref|YP_007866931.1|	-	7.1e-15	55.0	0.1	1.7e-14	53.8	0.0	1.6	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	N-terminal	domain
MR_MLE	PF01188.16	gi|479326874|ref|YP_007866931.1|	-	1.4e-14	54.3	0.0	3e-14	53.2	0.0	1.6	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
adh_short	PF00106.20	gi|479326875|ref|YP_007866932.1|	-	2.5e-20	73.0	0.0	4e-20	72.4	0.0	1.3	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|479326875|ref|YP_007866932.1|	-	1.5e-15	57.6	0.0	2.5e-15	56.9	0.0	1.3	1	1	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|479326875|ref|YP_007866932.1|	-	0.019	14.6	0.0	0.074	12.7	0.0	1.9	1	1	0	1	1	1	0	KR	domain
NAD_binding_10	PF13460.1	gi|479326875|ref|YP_007866932.1|	-	0.041	13.8	0.0	0.064	13.2	0.0	1.3	1	0	0	1	1	1	0	NADH(P)-binding
Epimerase	PF01370.16	gi|479326875|ref|YP_007866932.1|	-	0.062	12.7	0.0	0.18	11.2	0.0	1.7	2	0	0	2	2	2	0	NAD	dependent	epimerase/dehydratase	family
DUF1404	PF07185.6	gi|479326876|ref|YP_007866933.1|	-	2.1e-64	216.1	20.0	2.4e-64	215.9	13.9	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1404)
Rieske	PF00355.21	gi|479326879|ref|YP_007866936.1|	-	9.7e-13	47.5	0.1	2.2e-12	46.4	0.1	1.6	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
COX2	PF00116.15	gi|479326880|ref|YP_007866937.1|	-	0.0011	18.7	0.0	0.0017	18.2	0.0	1.3	1	0	0	1	1	1	1	Cytochrome	C	oxidase	subunit	II,	periplasmic	domain
COX1	PF00115.15	gi|479326881|ref|YP_007866938.1|	-	5.4e-80	269.1	60.7	7.1e-80	268.8	42.1	1.0	1	0	0	1	1	1	1	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
Cytochrom_B_N_2	PF13631.1	gi|479326882|ref|YP_007866939.1|	-	2.2e-56	190.2	4.8	2.2e-56	190.2	3.3	4.2	4	1	1	5	5	5	2	Cytochrome	b(N-terminal)/b6/petB
Cytochrom_B_C	PF00032.12	gi|479326882|ref|YP_007866939.1|	-	0.012	15.8	4.1	0.012	15.8	2.8	4.4	3	2	3	6	6	6	0	Cytochrome	b(C-terminal)/b6/petD
Claudin_2	PF13903.1	gi|479326883|ref|YP_007866940.1|	-	0.54	9.9	4.2	0.67	9.6	2.9	1.0	1	0	0	1	1	1	0	PMP-22/EMP/MP20/Claudin	tight	junction
DUF4282	PF14110.1	gi|479326883|ref|YP_007866940.1|	-	1.3	9.2	6.3	1.7	8.9	4.3	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4282)
DUF4040	PF13244.1	gi|479326883|ref|YP_007866940.1|	-	1.5	8.8	7.6	5.8	6.9	0.6	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4040)
DUF3487	PF11990.3	gi|479326883|ref|YP_007866940.1|	-	2.5	7.5	4.7	2.9	7.2	3.2	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3487)
SdpI	PF13630.1	gi|479326883|ref|YP_007866940.1|	-	7.8	6.2	9.8	9.5	6.0	6.8	1.2	1	0	0	1	1	1	0	SdpI/YhfL	protein	family
PAP2	PF01569.16	gi|479326884|ref|YP_007866941.1|	-	4.4e-23	81.3	3.4	4.4e-23	81.3	2.4	2.0	3	0	0	3	3	3	1	PAP2	superfamily
PAP2_C	PF14360.1	gi|479326884|ref|YP_007866941.1|	-	3	8.2	10.8	0.091	13.0	1.5	2.7	3	0	0	3	3	3	0	PAP2	superfamily	C-terminal
Arc_trans_TRASH	PF08394.5	gi|479326885|ref|YP_007866942.1|	-	3.7e-18	65.3	9.4	7e-18	64.4	6.5	1.5	1	0	0	1	1	1	1	Archaeal	TRASH	domain
HTH_24	PF13412.1	gi|479326885|ref|YP_007866942.1|	-	9.2e-13	47.3	1.4	1.5e-12	46.7	1.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.17	gi|479326885|ref|YP_007866942.1|	-	8.5e-10	38.2	0.2	1.3e-09	37.5	0.1	1.3	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.2	gi|479326885|ref|YP_007866942.1|	-	1.4e-09	37.4	0.4	2.1e-09	36.9	0.3	1.3	1	0	0	1	1	1	1	MarR	family
HTH_11	PF08279.7	gi|479326885|ref|YP_007866942.1|	-	8.2e-08	31.7	0.6	1.8e-07	30.7	0.4	1.5	1	0	0	1	1	1	1	HTH	domain
HTH_AsnC-type	PF13404.1	gi|479326885|ref|YP_007866942.1|	-	2.3e-07	30.2	1.3	3.6e-07	29.6	0.9	1.4	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_IclR	PF09339.5	gi|479326885|ref|YP_007866942.1|	-	7.3e-07	28.6	0.3	1.1e-06	28.0	0.2	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
TrmB	PF01978.14	gi|479326885|ref|YP_007866942.1|	-	2.6e-06	27.0	0.0	5.2e-06	26.0	0.0	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_23	PF13384.1	gi|479326885|ref|YP_007866942.1|	-	1.6e-05	24.3	0.1	3.6e-05	23.2	0.1	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
Fe_dep_repress	PF01325.14	gi|479326885|ref|YP_007866942.1|	-	3.1e-05	23.8	0.0	5.5e-05	23.0	0.0	1.3	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Mga	PF05043.8	gi|479326885|ref|YP_007866942.1|	-	8.1e-05	22.8	0.3	0.00019	21.6	0.1	1.7	1	1	0	1	1	1	1	Mga	helix-turn-helix	domain
HTH_17	PF12728.2	gi|479326885|ref|YP_007866942.1|	-	9.7e-05	22.5	0.1	0.0012	19.0	0.0	2.3	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_26	PF13443.1	gi|479326885|ref|YP_007866942.1|	-	0.00021	21.4	0.4	0.00085	19.4	0.1	2.0	2	0	0	2	2	2	1	Cro/C1-type	HTH	DNA-binding	domain
HTH_28	PF13518.1	gi|479326885|ref|YP_007866942.1|	-	0.00021	21.2	0.4	0.0014	18.5	0.0	2.1	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_10	PF04967.7	gi|479326885|ref|YP_007866942.1|	-	0.00025	20.5	1.1	0.00039	19.9	0.1	1.8	2	0	0	2	2	1	1	HTH	DNA	binding	domain
HTH_27	PF13463.1	gi|479326885|ref|YP_007866942.1|	-	0.00031	21.0	0.2	0.00056	20.1	0.1	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_3	PF01381.17	gi|479326885|ref|YP_007866942.1|	-	0.00032	20.4	0.5	0.00064	19.5	0.1	1.6	2	0	0	2	2	1	1	Helix-turn-helix
FeoC	PF09012.5	gi|479326885|ref|YP_007866942.1|	-	0.00038	20.1	0.8	0.0008	19.0	0.0	2.0	2	0	0	2	2	1	1	FeoC	like	transcriptional	regulator
HTH_DeoR	PF08220.7	gi|479326885|ref|YP_007866942.1|	-	0.0004	19.8	0.4	0.0007	19.0	0.3	1.4	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
Rrf2	PF02082.15	gi|479326885|ref|YP_007866942.1|	-	0.00066	19.7	0.1	0.0011	19.0	0.0	1.3	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_31	PF13560.1	gi|479326885|ref|YP_007866942.1|	-	0.00084	19.4	1.2	0.0014	18.8	0.9	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_6	PF01418.12	gi|479326885|ref|YP_007866942.1|	-	0.0012	18.5	0.0	0.0022	17.6	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain,	rpiR	family
GntR	PF00392.16	gi|479326885|ref|YP_007866942.1|	-	0.0017	17.7	0.3	0.003	16.9	0.2	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HTH_Mga	PF08280.6	gi|479326885|ref|YP_007866942.1|	-	0.0028	17.3	0.3	0.0062	16.2	0.1	1.7	2	0	0	2	2	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
CENP-B_N	PF04218.8	gi|479326885|ref|YP_007866942.1|	-	0.0052	16.1	0.1	0.014	14.7	0.1	1.7	1	0	0	1	1	1	1	CENP-B	N-terminal	DNA-binding	domain
HTH_Crp_2	PF13545.1	gi|479326885|ref|YP_007866942.1|	-	0.0052	16.5	0.1	0.011	15.4	0.0	1.6	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_20	PF12840.2	gi|479326885|ref|YP_007866942.1|	-	0.0096	15.7	0.1	0.017	14.9	0.1	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_7	PF02796.10	gi|479326885|ref|YP_007866942.1|	-	0.011	15.5	0.1	0.011	15.5	0.1	1.6	2	0	0	2	2	1	0	Helix-turn-helix	domain	of	resolvase
zf-FCS	PF06467.9	gi|479326885|ref|YP_007866942.1|	-	0.012	15.2	3.3	0.028	14.0	2.3	1.6	1	0	0	1	1	1	0	MYM-type	Zinc	finger	with	FCS	sequence	motif
HTH_29	PF13551.1	gi|479326885|ref|YP_007866942.1|	-	0.014	15.5	0.0	0.025	14.7	0.0	1.4	1	0	0	1	1	1	0	Winged	helix-turn	helix
HTH_5	PF01022.15	gi|479326885|ref|YP_007866942.1|	-	0.016	14.8	0.1	0.027	14.1	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
NUMOD1	PF07453.8	gi|479326885|ref|YP_007866942.1|	-	0.016	15.0	0.1	0.048	13.5	0.1	1.9	1	0	0	1	1	1	0	NUMOD1	domain
HTH_37	PF13744.1	gi|479326885|ref|YP_007866942.1|	-	0.019	14.7	0.1	0.034	13.9	0.1	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_38	PF13936.1	gi|479326885|ref|YP_007866942.1|	-	0.019	14.4	0.6	0.033	13.7	0.4	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_34	PF13601.1	gi|479326885|ref|YP_007866942.1|	-	0.021	14.8	0.1	0.031	14.2	0.1	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_Tnp_Tc3_2	PF01498.13	gi|479326885|ref|YP_007866942.1|	-	0.025	14.6	0.6	0.42	10.7	0.3	2.1	2	0	0	2	2	2	0	Transposase
HTH_AraC	PF00165.18	gi|479326885|ref|YP_007866942.1|	-	0.03	14.1	0.0	0.059	13.2	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	proteins,	AraC	family
HTH_19	PF12844.2	gi|479326885|ref|YP_007866942.1|	-	0.033	14.2	0.6	0.088	12.8	0.1	1.9	1	1	1	2	2	2	0	Helix-turn-helix	domain
zf-LITAF-like	PF10601.4	gi|479326885|ref|YP_007866942.1|	-	0.034	13.9	0.2	0.058	13.2	0.1	1.3	1	0	0	1	1	1	0	LITAF-like	zinc	ribbon	domain
Sigma70_r4	PF04545.11	gi|479326885|ref|YP_007866942.1|	-	0.041	13.1	0.7	0.12	11.6	0.5	1.9	1	1	0	1	1	1	0	Sigma-70,	region	4
EAP30	PF04157.11	gi|479326885|ref|YP_007866942.1|	-	0.047	12.8	0.0	0.091	11.9	0.0	1.4	1	0	0	1	1	1	0	EAP30/Vps36	family
Penicillinase_R	PF03965.11	gi|479326885|ref|YP_007866942.1|	-	0.049	13.7	0.0	0.076	13.1	0.0	1.4	1	0	0	1	1	1	0	Penicillinase	repressor
HTH_Tnp_ISL3	PF13542.1	gi|479326885|ref|YP_007866942.1|	-	0.079	12.1	0.2	0.11	11.6	0.1	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	transposase	family	ISL3
ANT	PF03374.9	gi|479326885|ref|YP_007866942.1|	-	0.083	12.9	0.0	0.13	12.3	0.0	1.2	1	0	0	1	1	1	0	Phage	antirepressor	protein	KilAC	domain
HTH_36	PF13730.1	gi|479326885|ref|YP_007866942.1|	-	0.11	12.5	0.5	0.25	11.5	0.1	1.8	2	0	0	2	2	1	0	Helix-turn-helix	domain
H_lectin	PF09458.5	gi|479326885|ref|YP_007866942.1|	-	0.12	12.0	0.0	0.21	11.2	0.0	1.4	1	0	0	1	1	1	0	H-type	lectin	domain
HTH_psq	PF05225.11	gi|479326885|ref|YP_007866942.1|	-	0.14	11.7	0.0	0.24	11.0	0.0	1.3	1	0	0	1	1	1	0	helix-turn-helix,	Psq	domain
LexA_DNA_bind	PF01726.11	gi|479326885|ref|YP_007866942.1|	-	0.14	11.7	0.3	0.3	10.6	0.2	1.6	1	1	0	1	1	1	0	LexA	DNA	binding	domain
Crp	PF00325.15	gi|479326885|ref|YP_007866942.1|	-	0.17	11.3	0.5	0.38	10.2	0.4	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	crp	family
HTH_25	PF13413.1	gi|479326885|ref|YP_007866942.1|	-	0.37	10.4	2.0	1.1	9.0	0.4	2.2	2	0	0	2	2	2	0	Helix-turn-helix	domain
YHS	PF04945.8	gi|479326886|ref|YP_007866943.1|	-	4.5e-19	68.0	1.3	5.3e-19	67.7	0.9	1.0	1	0	0	1	1	1	1	YHS	domain
zf-FCS	PF06467.9	gi|479326886|ref|YP_007866943.1|	-	1.2e-05	24.8	2.7	1.6e-05	24.4	1.4	1.5	1	1	1	2	2	2	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
Arc_trans_TRASH	PF08394.5	gi|479326886|ref|YP_007866943.1|	-	8.7e-05	22.5	2.5	0.00012	22.1	1.7	1.2	1	0	0	1	1	1	1	Archaeal	TRASH	domain
Ribosomal_L24e	PF01246.15	gi|479326886|ref|YP_007866943.1|	-	0.037	13.8	0.1	0.042	13.6	0.1	1.2	1	0	0	1	1	1	0	Ribosomal	protein	L24e
HTH_Tnp_Tc3_1	PF11427.3	gi|479326886|ref|YP_007866943.1|	-	0.15	11.7	0.1	0.25	10.9	0.1	1.3	1	0	0	1	1	1	0	Tc3	transposase
E1-E2_ATPase	PF00122.15	gi|479326887|ref|YP_007866944.1|	-	2.1e-47	161.0	1.0	3.5e-47	160.3	0.7	1.4	1	0	0	1	1	1	1	E1-E2	ATPase
Hydrolase	PF00702.21	gi|479326887|ref|YP_007866944.1|	-	4.2e-33	115.5	0.2	9.6e-33	114.4	0.2	1.7	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HMA	PF00403.21	gi|479326887|ref|YP_007866944.1|	-	2.4e-17	62.8	12.6	5.6e-14	52.0	0.9	3.5	4	0	0	4	4	4	2	Heavy-metal-associated	domain
HAD	PF12710.2	gi|479326887|ref|YP_007866944.1|	-	5.8e-15	55.9	0.2	2.5e-14	53.9	0.1	2.1	2	0	0	2	2	2	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.7	gi|479326887|ref|YP_007866944.1|	-	9.1e-12	45.0	1.0	7e-06	25.7	0.3	2.3	2	0	0	2	2	2	2	haloacid	dehalogenase-like	hydrolase
PrpR_N	PF06506.6	gi|479326887|ref|YP_007866944.1|	-	0.0084	15.5	0.2	1.7	8.0	0.0	2.8	1	1	1	2	2	2	1	Propionate	catabolism	activator
Hydrolase_6	PF13344.1	gi|479326887|ref|YP_007866944.1|	-	0.028	14.2	0.1	0.21	11.5	0.0	2.5	3	1	0	3	3	3	0	Haloacid	dehalogenase-like	hydrolase
BON	PF04972.12	gi|479326887|ref|YP_007866944.1|	-	0.032	13.9	2.2	7.2	6.4	0.0	3.1	2	0	0	2	2	2	0	BON	domain
HAD_2	PF13419.1	gi|479326887|ref|YP_007866944.1|	-	0.086	13.0	0.0	0.49	10.6	0.0	2.3	1	1	0	1	1	1	0	Haloacid	dehalogenase-like	hydrolase
TroA	PF01297.12	gi|479326887|ref|YP_007866944.1|	-	0.12	11.6	0.1	7.1	5.7	0.0	2.8	2	1	1	3	3	3	0	Periplasmic	solute	binding	protein	family
zf-Di19	PF05605.7	gi|479326888|ref|YP_007866945.1|	-	0.0024	17.9	0.0	0.0038	17.3	0.0	1.3	1	0	0	1	1	1	1	Drought	induced	19	protein	(Di19),	zinc-binding
HTH_23	PF13384.1	gi|479326888|ref|YP_007866945.1|	-	0.036	13.7	0.0	0.11	12.1	0.0	1.9	1	1	0	1	1	1	0	Homeodomain-like	domain
Transposase_21	PF02992.9	gi|479326888|ref|YP_007866945.1|	-	0.049	12.7	0.2	0.067	12.2	0.1	1.1	1	0	0	1	1	1	0	Transposase	family	tnp2
ABC_tran	PF00005.22	gi|479326889|ref|YP_007866946.1|	-	5.7e-28	97.9	0.0	9.8e-28	97.1	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|479326889|ref|YP_007866946.1|	-	8.7e-16	58.7	4.1	1e-14	55.2	0.1	2.9	2	1	0	2	2	2	1	AAA	domain
AAA_15	PF13175.1	gi|479326889|ref|YP_007866946.1|	-	3.7e-06	26.2	0.4	0.0021	17.1	0.3	2.6	2	1	0	2	2	2	2	AAA	ATPase	domain
AAA_29	PF13555.1	gi|479326889|ref|YP_007866946.1|	-	2.3e-05	23.8	0.1	4.2e-05	22.9	0.1	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
Rad17	PF03215.10	gi|479326889|ref|YP_007866946.1|	-	0.00031	19.5	0.0	0.0004	19.2	0.0	1.1	1	0	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
AAA_17	PF13207.1	gi|479326889|ref|YP_007866946.1|	-	0.0061	17.3	0.2	0.037	14.8	0.0	2.3	2	1	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|479326889|ref|YP_007866946.1|	-	0.0066	16.4	0.0	0.014	15.3	0.0	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|479326889|ref|YP_007866946.1|	-	0.0083	16.2	0.2	0.033	14.3	0.1	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.1	gi|479326889|ref|YP_007866946.1|	-	0.0087	16.4	2.4	0.025	14.9	1.7	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|479326889|ref|YP_007866946.1|	-	0.0087	15.7	0.0	0.021	14.5	0.0	1.7	1	0	0	1	1	1	1	Part	of	AAA	domain
DUF977	PF06163.6	gi|479326889|ref|YP_007866946.1|	-	0.013	15.2	0.1	0.049	13.3	0.1	2.1	1	1	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF977)
SMC_N	PF02463.14	gi|479326889|ref|YP_007866946.1|	-	0.014	14.6	0.0	0.28	10.3	0.0	2.2	2	0	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
IstB_IS21	PF01695.12	gi|479326889|ref|YP_007866946.1|	-	0.017	14.5	0.0	0.2	11.0	0.0	2.1	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
DUF258	PF03193.11	gi|479326889|ref|YP_007866946.1|	-	0.028	13.6	0.1	0.048	12.8	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
Zeta_toxin	PF06414.7	gi|479326889|ref|YP_007866946.1|	-	0.043	12.9	0.0	0.078	12.0	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
NTPase_1	PF03266.10	gi|479326889|ref|YP_007866946.1|	-	0.045	13.4	0.4	2.7	7.6	0.0	2.5	2	1	1	3	3	3	0	NTPase
AAA_24	PF13479.1	gi|479326889|ref|YP_007866946.1|	-	0.045	13.3	0.3	0.38	10.2	0.1	2.1	2	0	0	2	2	2	0	AAA	domain
AAA_33	PF13671.1	gi|479326889|ref|YP_007866946.1|	-	0.053	13.4	0.0	0.12	12.2	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
ResIII	PF04851.10	gi|479326889|ref|YP_007866946.1|	-	0.063	13.1	0.2	3.7	7.3	0.0	2.3	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
AAA_30	PF13604.1	gi|479326889|ref|YP_007866946.1|	-	0.077	12.5	0.0	0.22	11.0	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
AAA	PF00004.24	gi|479326889|ref|YP_007866946.1|	-	0.078	13.1	0.1	0.25	11.5	0.1	2.0	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_28	PF13521.1	gi|479326889|ref|YP_007866946.1|	-	0.12	12.3	0.0	0.26	11.2	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
SRP54	PF00448.17	gi|479326889|ref|YP_007866946.1|	-	0.12	11.8	0.1	0.23	10.8	0.1	1.5	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
ABC2_membrane	PF01061.19	gi|479326890|ref|YP_007866947.1|	-	5.3e-15	55.1	27.4	5.3e-15	55.1	19.0	1.6	2	1	0	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.2	gi|479326890|ref|YP_007866947.1|	-	5.3e-10	38.8	32.3	5.3e-10	38.8	22.4	1.3	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
Romo1	PF10247.4	gi|479326890|ref|YP_007866947.1|	-	0.0067	16.5	2.1	0.016	15.4	0.1	2.3	2	0	0	2	2	2	1	Reactive	mitochondrial	oxygen	species	modulator	1
DUF3501	PF12007.3	gi|479326892|ref|YP_007866949.1|	-	5.9e-59	198.9	0.6	6.6e-59	198.8	0.4	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3501)
CCG	PF02754.11	gi|479326893|ref|YP_007866950.1|	-	3.1e-18	65.5	0.0	2e-10	40.5	0.0	2.8	2	0	0	2	2	2	2	Cysteine-rich	domain
Fer4_8	PF13183.1	gi|479326893|ref|YP_007866950.1|	-	6.2e-05	22.9	8.2	0.00016	21.6	5.4	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|479326893|ref|YP_007866950.1|	-	0.00025	20.8	5.4	0.044	13.7	0.7	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|479326893|ref|YP_007866950.1|	-	0.00058	20.1	5.1	0.0016	18.7	3.5	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|479326893|ref|YP_007866950.1|	-	0.0027	17.9	7.1	0.0062	16.7	4.9	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|479326893|ref|YP_007866950.1|	-	0.017	15.4	10.2	0.23	11.8	7.2	2.4	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|479326893|ref|YP_007866950.1|	-	0.028	14.1	8.5	0.19	11.5	1.5	2.2	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|479326893|ref|YP_007866950.1|	-	0.031	13.8	11.9	0.53	9.9	2.3	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|479326893|ref|YP_007866950.1|	-	0.041	14.2	2.0	0.041	14.2	1.4	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|479326893|ref|YP_007866950.1|	-	0.16	11.8	11.6	2.4	8.0	1.3	2.4	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|479326893|ref|YP_007866950.1|	-	0.38	11.5	7.2	1.5	9.6	5.0	2.0	1	1	0	1	1	1	0	4Fe-4S	double	cluster	binding	domain
Fer4_6	PF12837.2	gi|479326893|ref|YP_007866950.1|	-	0.66	9.9	13.3	2.2	8.3	2.2	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|479326893|ref|YP_007866950.1|	-	1.2	9.6	6.1	15	6.0	0.3	2.7	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Rubrerythrin	PF02915.12	gi|479326894|ref|YP_007866951.1|	-	6.8e-26	91.2	0.9	1e-25	90.6	0.6	1.3	1	1	0	1	1	1	1	Rubrerythrin
Ferritin	PF00210.19	gi|479326894|ref|YP_007866951.1|	-	1.6e-10	40.9	0.1	8.4e-05	22.3	0.1	2.0	1	1	1	2	2	2	2	Ferritin-like	domain
DUF973	PF06157.6	gi|479326895|ref|YP_007866952.1|	-	0.006	15.5	2.6	0.0087	15.0	1.8	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
DUF2173	PF09941.4	gi|479326895|ref|YP_007866952.1|	-	0.0066	16.3	0.0	0.014	15.2	0.0	1.7	1	1	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2173)
DUF2207	PF09972.4	gi|479326895|ref|YP_007866952.1|	-	0.011	14.3	4.5	0.019	13.5	3.1	1.3	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
Cation_ATPase_C	PF00689.16	gi|479326895|ref|YP_007866952.1|	-	0.019	14.4	0.6	0.021	14.3	0.4	1.2	1	0	0	1	1	1	0	Cation	transporting	ATPase,	C-terminus
IncA	PF04156.9	gi|479326895|ref|YP_007866952.1|	-	0.092	12.3	2.2	0.14	11.7	1.6	1.3	1	0	0	1	1	1	0	IncA	protein
SdpI	PF13630.1	gi|479326895|ref|YP_007866952.1|	-	1.8	8.3	7.9	5.9	6.6	5.4	1.9	1	1	0	1	1	1	0	SdpI/YhfL	protein	family
DUF2173	PF09941.4	gi|479326896|ref|YP_007866953.1|	-	3.7e-05	23.5	0.0	6e-05	22.9	0.0	1.3	1	1	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2173)
Nfu_N	PF08712.6	gi|479326896|ref|YP_007866953.1|	-	0.14	11.7	0.0	0.22	11.1	0.0	1.4	1	0	0	1	1	1	0	Scaffold	protein	Nfu/NifU	N	terminal
Ald_Xan_dh_C2	PF02738.13	gi|479326897|ref|YP_007866954.1|	-	2.2e-136	455.4	0.0	2.7e-136	455.0	0.0	1.0	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|479326897|ref|YP_007866954.1|	-	5.5e-24	84.3	0.0	1.6e-23	82.8	0.0	1.9	2	0	0	2	2	2	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
Lipoprot_C	PF08794.5	gi|479326897|ref|YP_007866954.1|	-	0.1	12.4	0.2	0.26	11.1	0.1	1.7	2	0	0	2	2	2	0	Lipoprotein	GNA1870	C	terminal	like
Fer2_2	PF01799.15	gi|479326898|ref|YP_007866955.1|	-	1.8e-33	114.2	1.2	2.7e-33	113.6	0.0	1.7	2	0	0	2	2	2	1	[2Fe-2S]	binding	domain
Fer2	PF00111.22	gi|479326898|ref|YP_007866955.1|	-	5.3e-05	22.8	2.3	5.9e-05	22.7	0.2	2.0	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer2_3	PF13085.1	gi|479326898|ref|YP_007866955.1|	-	0.00043	20.0	2.1	0.00054	19.7	1.0	1.4	1	1	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
FAD_binding_5	PF00941.16	gi|479326899|ref|YP_007866956.1|	-	2.1e-37	128.1	0.0	3e-37	127.6	0.0	1.2	1	0	0	1	1	1	1	FAD	binding	domain	in	molybdopterin	dehydrogenase
CO_deh_flav_C	PF03450.12	gi|479326899|ref|YP_007866956.1|	-	1.9e-27	95.2	0.0	4.3e-27	94.0	0.0	1.6	2	0	0	2	2	2	1	CO	dehydrogenase	flavoprotein	C-terminal	domain
AIRS_C	PF02769.17	gi|479326900|ref|YP_007866957.1|	-	3.3e-05	23.9	0.2	8.6e-05	22.5	0.0	1.7	2	0	0	2	2	2	1	AIR	synthase	related	protein,	C-terminal	domain
Rhodanese	PF00581.15	gi|479326901|ref|YP_007866958.1|	-	8.1e-11	42.2	0.0	1.1e-10	41.8	0.0	1.2	1	0	0	1	1	1	1	Rhodanese-like	domain
RNA_pol_Rpc34	PF05158.7	gi|479326902|ref|YP_007866959.1|	-	1.9e-06	27.3	0.1	2.1e-06	27.1	0.0	1.0	1	0	0	1	1	1	1	RNA	polymerase	Rpc34	subunit
TFIIE_alpha	PF02002.12	gi|479326902|ref|YP_007866959.1|	-	1.4e-05	24.5	0.3	1.6e-05	24.3	0.2	1.0	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HTH_24	PF13412.1	gi|479326902|ref|YP_007866959.1|	-	3.3e-05	23.1	0.7	4.4e-05	22.7	0.5	1.1	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_36	PF13730.1	gi|479326902|ref|YP_007866959.1|	-	0.00021	21.3	0.0	0.00033	20.7	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_27	PF13463.1	gi|479326902|ref|YP_007866959.1|	-	0.00037	20.7	0.1	0.00042	20.5	0.1	1.1	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HxlR	PF01638.12	gi|479326902|ref|YP_007866959.1|	-	0.00045	19.7	0.5	0.00054	19.5	0.3	1.1	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_20	PF12840.2	gi|479326902|ref|YP_007866959.1|	-	0.00049	19.8	0.0	0.00063	19.4	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR_2	PF12802.2	gi|479326902|ref|YP_007866959.1|	-	0.00051	19.6	0.2	0.00059	19.4	0.1	1.1	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|479326902|ref|YP_007866959.1|	-	0.00054	19.6	0.2	0.00066	19.3	0.2	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_12	PF08461.5	gi|479326902|ref|YP_007866959.1|	-	0.0024	17.5	0.5	0.004	16.8	0.4	1.5	1	1	0	1	1	1	1	Ribonuclease	R	winged-helix	domain
MarR	PF01047.17	gi|479326902|ref|YP_007866959.1|	-	0.008	15.8	0.2	0.0097	15.5	0.1	1.2	1	0	0	1	1	1	1	MarR	family
Rrf2	PF02082.15	gi|479326902|ref|YP_007866959.1|	-	0.011	15.8	0.1	0.014	15.4	0.1	1.2	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_5	PF01022.15	gi|479326902|ref|YP_007866959.1|	-	0.013	15.1	0.0	0.018	14.7	0.0	1.2	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
Sulfolobus_pRN	PF05584.6	gi|479326902|ref|YP_007866959.1|	-	0.017	15.0	0.9	0.023	14.6	0.6	1.2	1	0	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
HTH_43	PF09904.4	gi|479326902|ref|YP_007866959.1|	-	0.051	13.3	0.0	0.061	13.1	0.0	1.2	1	0	0	1	1	1	0	Winged	helix-turn	helix
NdhN	PF11909.3	gi|479326902|ref|YP_007866959.1|	-	0.08	12.2	0.1	0.094	12.0	0.1	1.1	1	0	0	1	1	1	0	NADH-quinone	oxidoreductase	cyanobacterial	subunit	N
GntR	PF00392.16	gi|479326902|ref|YP_007866959.1|	-	0.086	12.2	0.4	0.11	11.8	0.2	1.4	1	1	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
FeoC	PF09012.5	gi|479326902|ref|YP_007866959.1|	-	0.086	12.5	0.0	0.1	12.3	0.0	1.1	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
Cullin	PF00888.17	gi|479326902|ref|YP_007866959.1|	-	0.096	11.2	0.1	0.1	11.1	0.1	1.0	1	0	0	1	1	1	0	Cullin	family
HTH_Mga	PF08280.6	gi|479326902|ref|YP_007866959.1|	-	0.097	12.4	0.3	0.13	12.0	0.2	1.2	1	0	0	1	1	1	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_IclR	PF09339.5	gi|479326902|ref|YP_007866959.1|	-	0.13	11.8	0.2	0.29	10.7	0.1	1.6	1	1	1	2	2	2	0	IclR	helix-turn-helix	domain
GTPase_Cys_C	PF12631.2	gi|479326903|ref|YP_007866960.1|	-	0.018	15.4	0.2	0.035	14.4	0.1	1.4	1	0	0	1	1	1	0	Catalytic	cysteine-containing	C-terminus	of	GTPase,	MnmE
DUF1641	PF07849.6	gi|479326904|ref|YP_007866961.1|	-	5.6e-16	57.8	0.0	2e-15	56.1	0.0	2.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1641)
DUF3886	PF13025.1	gi|479326904|ref|YP_007866961.1|	-	0.0068	16.3	0.5	21	5.1	0.0	4.7	5	0	0	5	5	5	0	Protein	of	unknown	function	(DUF3886)
efThoc1	PF11957.3	gi|479326904|ref|YP_007866961.1|	-	0.024	13.1	0.1	0.052	12.0	0.0	1.5	1	0	0	1	1	1	0	THO	complex	subunit	1	transcription	elongation	factor
PEP-utilisers_N	PF05524.8	gi|479326904|ref|YP_007866961.1|	-	0.024	14.4	1.0	0.34	10.7	0.1	3.0	2	1	1	3	3	3	0	PEP-utilising	enzyme,	N-terminal
DUF2666	PF10869.3	gi|479326904|ref|YP_007866961.1|	-	0.048	13.6	16.7	1.7	8.6	0.6	4.2	1	1	3	4	4	4	0	Protein	of	unknown	function	(DUF2666)
DUF2743	PF10899.3	gi|479326904|ref|YP_007866961.1|	-	0.059	12.7	0.5	0.14	11.5	0.1	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2743)
DUF3289	PF11692.3	gi|479326904|ref|YP_007866961.1|	-	0.06	12.6	4.7	0.47	9.6	0.6	2.4	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3289)
SRP_SPB	PF02978.14	gi|479326904|ref|YP_007866961.1|	-	0.071	13.3	5.9	3	8.1	0.1	4.2	2	2	3	5	5	5	0	Signal	peptide	binding	domain
Rod-binding	PF10135.4	gi|479326904|ref|YP_007866961.1|	-	0.15	12.0	0.1	23	5.0	0.0	3.1	4	0	0	4	4	4	0	Rod	binding	protein
DUF2482	PF10655.4	gi|479326904|ref|YP_007866961.1|	-	0.28	11.2	8.4	8.7	6.4	0.1	4.7	3	1	1	4	4	4	0	Hypothetical	protein	of	unknown	function	(DUF2482)
Virulence_RhuM	PF13310.1	gi|479326904|ref|YP_007866961.1|	-	0.42	9.5	5.5	1.3	7.9	0.1	3.4	1	1	3	4	4	4	0	Virulence	protein	RhuM	family
Phage_tail_T	PF06223.7	gi|479326904|ref|YP_007866961.1|	-	0.71	10.3	2.8	16	6.0	0.0	3.5	3	1	1	4	4	4	0	Minor	tail	protein	T
LUC7	PF03194.10	gi|479326904|ref|YP_007866961.1|	-	0.76	9.2	6.3	8.8	5.7	0.1	3.0	1	1	1	3	3	3	0	LUC7	N_terminus
DnaB	PF00772.16	gi|479326904|ref|YP_007866961.1|	-	1.2	9.0	6.3	72	3.3	0.1	4.3	4	1	1	5	5	5	0	DnaB-like	helicase	N	terminal	domain
DrsE	PF02635.10	gi|479326905|ref|YP_007866962.1|	-	1.7e-09	37.8	0.0	2e-09	37.5	0.0	1.1	1	0	0	1	1	1	1	DsrE/DsrF-like	family
DrsE_2	PF13686.1	gi|479326905|ref|YP_007866962.1|	-	1.6e-06	27.9	0.1	4.3e-06	26.5	0.0	1.6	1	1	1	2	2	2	1	DsrE/DsrF/DrsH-like	family
DUF3456	PF11938.3	gi|479326905|ref|YP_007866962.1|	-	0.07	13.1	0.0	0.092	12.7	0.0	1.1	1	0	0	1	1	1	0	TLR4	regulator	and	MIR-interacting	MSAP
TENA_THI-4	PF03070.11	gi|479326905|ref|YP_007866962.1|	-	0.12	12.1	0.0	0.15	11.8	0.0	1.1	1	0	0	1	1	1	0	TENA/THI-4/PQQC	family
Pyr_redox_2	PF07992.9	gi|479326906|ref|YP_007866963.1|	-	2.9e-08	33.8	0.0	7.1e-08	32.5	0.0	1.9	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|479326906|ref|YP_007866963.1|	-	0.067	13.6	0.2	2.4	8.6	0.0	2.8	2	1	0	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
TusA	PF01206.12	gi|479326907|ref|YP_007866964.1|	-	9.1e-13	47.6	0.0	1e-12	47.4	0.0	1.0	1	0	0	1	1	1	1	Sulfurtransferase	TusA
DrsE	PF02635.10	gi|479326908|ref|YP_007866965.1|	-	0.0083	16.1	0.0	0.0089	16.0	0.0	1.2	1	0	0	1	1	1	1	DsrE/DsrF-like	family
AMP-binding_C_2	PF14535.1	gi|479326909|ref|YP_007866966.1|	-	4.5e-18	65.0	3.0	1.6e-17	63.2	1.1	2.3	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
AMP-binding	PF00501.23	gi|479326909|ref|YP_007866966.1|	-	5.1e-17	61.3	0.0	8.6e-17	60.6	0.0	1.5	1	1	0	1	1	1	1	AMP-binding	enzyme
Actin	PF00022.14	gi|479326909|ref|YP_007866966.1|	-	0.039	12.3	0.0	0.43	8.9	0.0	2.2	2	0	0	2	2	2	0	Actin
DUF35_N	PF12172.3	gi|479326910|ref|YP_007866967.1|	-	3.4e-12	45.8	0.1	4.8e-12	45.4	0.0	1.2	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF35	PF01796.12	gi|479326910|ref|YP_007866967.1|	-	1.5e-10	41.1	0.0	3e-10	40.1	0.0	1.5	1	1	1	2	2	2	1	DUF35	OB-fold	domain
DZR	PF12773.2	gi|479326910|ref|YP_007866967.1|	-	0.028	14.2	0.8	0.042	13.6	0.6	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
TF_Zn_Ribbon	PF08271.7	gi|479326910|ref|YP_007866967.1|	-	0.12	11.7	1.4	1.6	8.0	0.0	2.5	2	1	0	2	2	2	0	TFIIB	zinc-binding
TFIIS_C	PF01096.13	gi|479326910|ref|YP_007866967.1|	-	0.16	11.6	1.9	8.3	6.1	0.1	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zf-ribbon_3	PF13248.1	gi|479326910|ref|YP_007866967.1|	-	0.25	10.6	3.0	8.2	5.7	0.2	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
YhfH	PF14149.1	gi|479326910|ref|YP_007866967.1|	-	0.41	10.4	4.1	0.61	9.9	0.4	2.2	2	0	0	2	2	2	0	YhfH-like	protein
zf-CCHC	PF00098.18	gi|479326910|ref|YP_007866967.1|	-	1.2	9.1	8.6	1.4	8.9	1.5	2.3	2	0	0	2	2	2	0	Zinc	knuckle
Thiolase_C	PF02803.13	gi|479326911|ref|YP_007866968.1|	-	5.9e-10	38.6	0.6	6.1e-09	35.3	0.0	2.7	3	0	0	3	3	3	1	Thiolase,	C-terminal	domain
Thiolase_N	PF00108.18	gi|479326911|ref|YP_007866968.1|	-	7.5e-10	38.2	1.0	1.1e-09	37.6	0.0	1.8	3	0	0	3	3	3	1	Thiolase,	N-terminal	domain
ketoacyl-synt	PF00109.21	gi|479326911|ref|YP_007866968.1|	-	1.8e-05	24.3	5.2	0.00059	19.3	2.3	2.6	1	1	1	2	2	2	2	Beta-ketoacyl	synthase,	N-terminal	domain
Ketoacyl-synt_C	PF02801.17	gi|479326911|ref|YP_007866968.1|	-	0.0028	17.4	0.4	1	9.2	0.0	3.4	4	0	0	4	4	4	1	Beta-ketoacyl	synthase,	C-terminal	domain
ECH	PF00378.15	gi|479326912|ref|YP_007866969.1|	-	2.7e-80	269.0	0.9	3.1e-80	268.8	0.6	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
Peptidase_S49	PF01343.13	gi|479326912|ref|YP_007866969.1|	-	0.0005	19.8	0.3	0.0036	17.1	0.0	2.4	3	0	0	3	3	3	1	Peptidase	family	S49
ECH_C	PF13766.1	gi|479326912|ref|YP_007866969.1|	-	0.026	14.6	0.4	0.06	13.4	0.1	1.7	2	0	0	2	2	2	0	2-enoyl-CoA	Hydratase	C-terminal	region
DNA_pol_E_B	PF04042.11	gi|479326912|ref|YP_007866969.1|	-	0.11	11.6	0.0	11	5.2	0.0	2.2	2	0	0	2	2	2	0	DNA	polymerase	alpha/epsilon	subunit	B
ECH	PF00378.15	gi|479326913|ref|YP_007866970.1|	-	1.1e-39	136.0	0.0	1.2e-39	135.9	0.0	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
4HBT	PF03061.17	gi|479326914|ref|YP_007866971.1|	-	3.8e-14	52.5	0.0	5.4e-14	52.0	0.0	1.2	1	0	0	1	1	1	1	Thioesterase	superfamily
DUF4442	PF14539.1	gi|479326914|ref|YP_007866971.1|	-	0.0042	17.0	0.0	0.0066	16.4	0.0	1.3	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4442)
RNA_pol_I_A49	PF06870.7	gi|479326914|ref|YP_007866971.1|	-	0.022	13.3	0.0	0.029	12.9	0.0	1.1	1	0	0	1	1	1	0	A49-like	RNA	polymerase	I	associated	factor
Acyl-ACP_TE	PF01643.12	gi|479326914|ref|YP_007866971.1|	-	0.027	13.4	0.0	0.035	13.0	0.0	1.1	1	0	0	1	1	1	0	Acyl-ACP	thioesterase
4HBT_3	PF13622.1	gi|479326914|ref|YP_007866971.1|	-	0.038	13.7	0.0	0.043	13.5	0.0	1.1	1	0	0	1	1	1	0	Thioesterase-like	superfamily
YccV-like	PF08755.6	gi|479326914|ref|YP_007866971.1|	-	0.066	13.1	0.0	0.087	12.7	0.0	1.3	1	0	0	1	1	1	0	Hemimethylated	DNA-binding	protein	YccV	like
AurF	PF11583.3	gi|479326916|ref|YP_007866973.1|	-	6.6e-05	21.9	0.0	0.0059	15.5	0.0	2.2	2	0	0	2	2	2	2	P-aminobenzoate	N-oxygenase	AurF
Rubrerythrin	PF02915.12	gi|479326916|ref|YP_007866973.1|	-	0.046	14.0	0.0	0.29	11.4	0.1	2.1	2	0	0	2	2	2	0	Rubrerythrin
Ferritin_2	PF13668.1	gi|479326916|ref|YP_007866973.1|	-	0.12	12.2	0.0	0.19	11.6	0.0	1.3	1	0	0	1	1	1	0	Ferritin-like	domain
Antitoxin-MazE	PF04014.13	gi|479326917|ref|YP_007866974.1|	-	1.1e-08	34.6	0.4	2.4e-08	33.5	0.3	1.6	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
PhoU	PF01895.14	gi|479326917|ref|YP_007866974.1|	-	1.4e-06	28.6	10.7	0.0042	17.5	1.4	2.9	2	1	0	2	2	2	2	PhoU	domain
DFF-C	PF09033.5	gi|479326917|ref|YP_007866974.1|	-	0.074	12.8	1.5	0.14	12.0	1.0	1.7	1	1	0	1	1	1	0	DNA	Fragmentation	factor	45kDa,	C	terminal	domain
PMC2NT	PF08066.7	gi|479326917|ref|YP_007866974.1|	-	0.29	11.4	4.6	9.7	6.5	0.2	3.1	3	1	1	4	4	4	0	PMC2NT	(NUC016)	domain
Imm22	PF15592.1	gi|479326917|ref|YP_007866974.1|	-	1.4	9.2	7.0	0.38	11.0	1.5	2.5	2	1	1	3	3	3	0	Immunity	protein	22
Syntaxin-6_N	PF09177.6	gi|479326917|ref|YP_007866974.1|	-	3.9	7.9	8.3	2.6	8.4	0.5	3.2	3	1	1	4	4	4	0	Syntaxin	6,	N-terminal
SBP_bac_5	PF00496.17	gi|479326918|ref|YP_007866975.1|	-	6.2e-63	212.8	5.3	6.2e-63	212.8	3.7	2.3	2	1	0	2	2	2	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
Rifin_STEVOR	PF02009.11	gi|479326918|ref|YP_007866975.1|	-	0.0019	17.8	7.4	0.0036	16.9	5.2	1.3	1	0	0	1	1	1	1	Rifin/stevor	family
TMEM154	PF15102.1	gi|479326918|ref|YP_007866975.1|	-	0.052	13.2	16.3	0.099	12.3	11.3	1.4	1	0	0	1	1	1	0	TMEM154	protein	family
SSP160	PF06933.6	gi|479326918|ref|YP_007866975.1|	-	1.5	6.7	30.0	2.7	5.8	20.8	1.3	1	0	0	1	1	1	0	Special	lobe-specific	silk	protein	SSP160
Herpes_UL45	PF05473.7	gi|479326918|ref|YP_007866975.1|	-	4.1	6.7	8.6	8.5	5.7	6.0	1.5	1	0	0	1	1	1	0	UL45	protein
DUF1190	PF06693.6	gi|479326918|ref|YP_007866975.1|	-	5.3	7.0	7.2	9.2	6.2	5.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1190)
BPD_transp_1	PF00528.17	gi|479326919|ref|YP_007866976.1|	-	4.6e-48	163.1	15.1	4.6e-48	163.1	10.5	2.2	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.17	gi|479326920|ref|YP_007866977.1|	-	1.1e-26	93.4	17.2	1.1e-26	93.4	11.9	1.7	3	0	0	3	3	3	1	Binding-protein-dependent	transport	system	inner	membrane	component
ABC_tran	PF00005.22	gi|479326921|ref|YP_007866978.1|	-	6.8e-28	97.6	0.0	9.6e-28	97.1	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|479326921|ref|YP_007866978.1|	-	4.6e-19	68.5	0.0	7.7e-19	67.8	0.0	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|479326921|ref|YP_007866978.1|	-	1.5e-12	48.1	1.6	6e-10	39.5	1.1	2.2	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|479326921|ref|YP_007866978.1|	-	3.7e-07	29.5	0.1	6e-07	28.9	0.0	1.3	1	0	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|479326921|ref|YP_007866978.1|	-	7.3e-06	25.4	0.0	1.3e-05	24.6	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_18	PF13238.1	gi|479326921|ref|YP_007866978.1|	-	0.00019	21.7	0.3	0.0047	17.2	0.2	2.4	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|479326921|ref|YP_007866978.1|	-	0.00037	20.6	0.2	0.0018	18.4	0.2	2.0	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|479326921|ref|YP_007866978.1|	-	0.0013	18.7	0.0	0.003	17.5	0.0	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_23	PF13476.1	gi|479326921|ref|YP_007866978.1|	-	0.0031	17.8	0.0	0.0049	17.2	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|479326921|ref|YP_007866978.1|	-	0.0045	17.7	0.1	0.0098	16.7	0.1	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|479326921|ref|YP_007866978.1|	-	0.018	14.9	0.0	0.031	14.1	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|479326921|ref|YP_007866978.1|	-	0.042	13.2	1.0	2.2	7.6	0.7	2.6	1	1	0	2	2	2	0	AAA-like	domain
MobB	PF03205.9	gi|479326921|ref|YP_007866978.1|	-	0.045	13.4	0.0	0.091	12.4	0.0	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
PRK	PF00485.13	gi|479326921|ref|YP_007866978.1|	-	0.047	13.2	0.0	0.071	12.6	0.0	1.3	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
IstB_IS21	PF01695.12	gi|479326921|ref|YP_007866978.1|	-	0.067	12.5	0.4	13	5.2	0.0	2.8	2	1	1	3	3	3	0	IstB-like	ATP	binding	protein
NB-ARC	PF00931.17	gi|479326921|ref|YP_007866978.1|	-	0.069	11.9	0.2	0.19	10.5	0.0	1.7	2	0	0	2	2	2	0	NB-ARC	domain
AAA_15	PF13175.1	gi|479326921|ref|YP_007866978.1|	-	0.11	11.4	6.1	0.36	9.8	1.2	2.2	1	1	1	2	2	2	0	AAA	ATPase	domain
Mg_chelatase	PF01078.16	gi|479326921|ref|YP_007866978.1|	-	0.12	11.4	0.0	0.4	9.8	0.0	1.8	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
DUF258	PF03193.11	gi|479326921|ref|YP_007866978.1|	-	0.12	11.5	0.0	0.26	10.4	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
GCD14	PF08704.5	gi|479326921|ref|YP_007866978.1|	-	0.14	11.6	0.4	0.27	10.7	0.0	1.5	2	0	0	2	2	2	0	tRNA	methyltransferase	complex	GCD14	subunit
G-alpha	PF00503.15	gi|479326921|ref|YP_007866978.1|	-	0.15	10.7	0.0	0.18	10.4	0.0	1.2	1	0	0	1	1	1	0	G-protein	alpha	subunit
ABC_ATPase	PF09818.4	gi|479326921|ref|YP_007866978.1|	-	0.18	10.3	0.7	10	4.5	0.0	2.2	2	1	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
ABC_tran	PF00005.22	gi|479326922|ref|YP_007866979.1|	-	1.9e-36	125.4	0.0	2.8e-36	124.8	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|479326922|ref|YP_007866979.1|	-	2.6e-22	78.9	0.2	5.9e-22	77.8	0.2	1.6	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|479326922|ref|YP_007866979.1|	-	5.1e-12	46.3	0.2	7.3e-08	32.7	0.0	2.1	1	1	1	2	2	2	2	AAA	domain
AAA_22	PF13401.1	gi|479326922|ref|YP_007866979.1|	-	4.1e-06	26.9	0.5	9.9e-06	25.7	0.3	1.6	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|479326922|ref|YP_007866979.1|	-	0.00018	20.7	2.2	0.0024	17.1	1.5	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_18	PF13238.1	gi|479326922|ref|YP_007866979.1|	-	0.00026	21.3	0.3	0.00097	19.4	0.2	2.0	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|479326922|ref|YP_007866979.1|	-	0.00064	19.9	0.6	0.057	13.6	0.4	2.6	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_13	PF13166.1	gi|479326922|ref|YP_007866979.1|	-	0.00088	17.8	0.7	0.24	9.8	0.0	2.3	2	1	0	2	2	2	2	AAA	domain
AAA_16	PF13191.1	gi|479326922|ref|YP_007866979.1|	-	0.0012	18.9	0.1	0.0031	17.5	0.1	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_25	PF13481.1	gi|479326922|ref|YP_007866979.1|	-	0.0016	17.8	0.2	0.0069	15.8	0.1	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|479326922|ref|YP_007866979.1|	-	0.0022	17.1	1.0	0.4	9.6	0.0	2.1	1	1	0	2	2	2	2	AAA	ATPase	domain
AAA_17	PF13207.1	gi|479326922|ref|YP_007866979.1|	-	0.0023	18.7	0.4	0.0058	17.4	0.3	1.8	1	1	0	1	1	1	1	AAA	domain
KaiC	PF06745.8	gi|479326922|ref|YP_007866979.1|	-	0.0054	15.8	1.2	0.045	12.8	0.2	2.4	2	1	0	2	2	2	1	KaiC
SbcCD_C	PF13558.1	gi|479326922|ref|YP_007866979.1|	-	0.011	15.5	0.3	0.052	13.4	0.2	2.0	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_29	PF13555.1	gi|479326922|ref|YP_007866979.1|	-	0.015	14.8	0.1	0.026	14.0	0.1	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
Miro	PF08477.8	gi|479326922|ref|YP_007866979.1|	-	0.057	13.9	0.3	0.18	12.3	0.2	2.0	1	1	0	1	1	1	0	Miro-like	protein
Arch_ATPase	PF01637.13	gi|479326922|ref|YP_007866979.1|	-	0.069	12.8	0.9	0.25	10.9	0.6	1.9	1	1	0	1	1	1	0	Archaeal	ATPase
NACHT	PF05729.7	gi|479326922|ref|YP_007866979.1|	-	0.1	12.2	0.0	0.18	11.4	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
AAA_10	PF12846.2	gi|479326922|ref|YP_007866979.1|	-	0.18	11.2	0.6	0.42	9.9	0.4	1.6	1	1	0	1	1	1	0	AAA-like	domain
AAA_5	PF07728.9	gi|479326922|ref|YP_007866979.1|	-	0.19	11.4	1.2	5	6.8	0.8	2.3	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
MobB	PF03205.9	gi|479326922|ref|YP_007866979.1|	-	0.2	11.3	1.7	0.21	11.3	0.2	1.7	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_33	PF13671.1	gi|479326922|ref|YP_007866979.1|	-	0.3	10.9	1.0	0.87	9.4	0.7	2.0	1	1	0	1	1	1	0	AAA	domain
bPH_2	PF03703.9	gi|479326923|ref|YP_007866980.1|	-	0.00016	21.6	0.0	0.00046	20.1	0.0	1.8	1	1	0	1	1	1	1	Bacterial	PH	domain
zf-LYAR	PF08790.6	gi|479326923|ref|YP_007866980.1|	-	0.013	15.2	0.1	0.025	14.2	0.1	1.4	1	0	0	1	1	1	0	LYAR-type	C2HC	zinc	finger
AhpC-TSA	PF00578.16	gi|479326924|ref|YP_007866981.1|	-	7.2e-40	135.5	0.2	8.4e-40	135.3	0.1	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|479326924|ref|YP_007866981.1|	-	1.9e-28	98.8	0.2	2.2e-28	98.6	0.2	1.0	1	0	0	1	1	1	1	Redoxin
Thioredoxin_8	PF13905.1	gi|479326924|ref|YP_007866981.1|	-	0.0016	18.5	0.1	0.0029	17.6	0.0	1.4	1	0	0	1	1	1	1	Thioredoxin-like
SCO1-SenC	PF02630.9	gi|479326924|ref|YP_007866981.1|	-	0.12	12.0	0.1	0.19	11.3	0.1	1.5	1	1	0	1	1	1	0	SCO1/SenC
Lactococcin	PF04369.8	gi|479326924|ref|YP_007866981.1|	-	0.16	11.9	0.1	0.27	11.1	0.1	1.3	1	0	0	1	1	1	0	Lactococcin-like	family
Trypsin_2	PF13365.1	gi|479326925|ref|YP_007866982.1|	-	2.2e-17	63.1	0.1	3.3e-17	62.5	0.1	1.3	1	0	0	1	1	1	1	Trypsin-like	peptidase	domain
PDZ_2	PF13180.1	gi|479326925|ref|YP_007866982.1|	-	6.8e-14	51.5	0.1	1.7e-13	50.2	0.1	1.7	1	0	0	1	1	1	1	PDZ	domain
Trypsin	PF00089.21	gi|479326925|ref|YP_007866982.1|	-	1.9e-08	34.1	0.1	5.1e-07	29.4	0.1	2.1	1	1	0	1	1	1	1	Trypsin
PDZ	PF00595.19	gi|479326925|ref|YP_007866982.1|	-	9.4e-07	28.9	0.1	2.6e-06	27.4	0.1	1.8	1	0	0	1	1	1	1	PDZ	domain	(Also	known	as	DHR	or	GLGF)
Peptidase_S32	PF05579.8	gi|479326925|ref|YP_007866982.1|	-	0.0013	17.7	0.1	0.038	12.9	0.1	2.1	1	1	0	1	1	1	1	Equine	arteritis	virus	serine	endopeptidase	S32
Tricorn_PDZ	PF14685.1	gi|479326925|ref|YP_007866982.1|	-	0.0025	17.5	0.1	0.0076	16.0	0.0	1.8	1	1	0	1	1	1	1	Tricorn	protease	PDZ	domain
Peptidase_S46	PF10459.4	gi|479326925|ref|YP_007866982.1|	-	0.022	13.2	0.2	0.032	12.6	0.2	1.2	1	0	0	1	1	1	0	Peptidase	S46
Peptidase_S7	PF00949.16	gi|479326925|ref|YP_007866982.1|	-	0.033	13.5	0.0	0.07	12.5	0.0	1.5	1	0	0	1	1	1	0	Peptidase	S7,	Flavivirus	NS3	serine	protease
DUF4382	PF14321.1	gi|479326926|ref|YP_007866983.1|	-	4.4e-26	91.6	0.1	5e-26	91.4	0.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4382)
GCP5-Mod21	PF14609.1	gi|479326926|ref|YP_007866983.1|	-	0.11	10.6	0.3	0.13	10.3	0.2	1.0	1	0	0	1	1	1	0	gamma-Tubulin	ring	complex	non-core	subunit	mod21
Glycos_transf_1	PF00534.15	gi|479326929|ref|YP_007866986.1|	-	4.9e-25	87.9	0.0	7.9e-25	87.2	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|479326929|ref|YP_007866986.1|	-	5.3e-07	29.8	0.0	9.1e-07	29.0	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|479326929|ref|YP_007866986.1|	-	1.6e-06	28.3	0.0	5.1e-06	26.6	0.0	1.8	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
DUF1451	PF07295.6	gi|479326931|ref|YP_007866988.1|	-	0.054	13.2	0.0	0.096	12.4	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1451)
Cyc-maltodext_C	PF10438.4	gi|479326931|ref|YP_007866988.1|	-	0.061	13.3	0.2	0.11	12.5	0.1	1.5	1	0	0	1	1	1	0	Cyclo-malto-dextrinase	C-terminal	domain
DUF1284	PF06935.6	gi|479326931|ref|YP_007866988.1|	-	2.2	8.5	6.7	0.79	9.9	1.1	2.5	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1284)
ABC1	PF03109.11	gi|479326933|ref|YP_007866990.1|	-	6.3e-20	71.3	0.0	1.9e-19	69.8	0.0	1.8	1	0	0	1	1	1	1	ABC1	family
RIO1	PF01163.17	gi|479326933|ref|YP_007866990.1|	-	4.5e-06	26.1	0.5	9.2e-06	25.1	0.1	1.6	2	0	0	2	2	2	1	RIO1	family
Pkinase	PF00069.20	gi|479326933|ref|YP_007866990.1|	-	0.00016	20.9	0.5	0.00084	18.5	0.4	2.0	1	1	0	1	1	1	1	Protein	kinase	domain
APH	PF01636.18	gi|479326933|ref|YP_007866990.1|	-	0.021	14.5	0.0	0.064	12.9	0.0	1.7	2	0	0	2	2	2	0	Phosphotransferase	enzyme	family
Gp-FAR-1	PF05823.7	gi|479326933|ref|YP_007866990.1|	-	0.83	9.6	4.9	2.2	8.2	0.9	3.2	3	1	0	3	3	3	0	Nematode	fatty	acid	retinoid	binding	protein	(Gp-FAR-1)
HSP20	PF00011.16	gi|479326934|ref|YP_007866991.1|	-	1.4e-09	37.7	0.1	1.7e-09	37.4	0.0	1.1	1	0	0	1	1	1	1	Hsp20/alpha	crystallin	family
DUF4403	PF14356.1	gi|479326934|ref|YP_007866991.1|	-	0.045	12.0	0.1	0.1	10.8	0.1	1.6	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4403)
GvpH	PF05455.6	gi|479326934|ref|YP_007866991.1|	-	0.13	11.9	0.0	0.24	10.9	0.0	1.6	1	1	0	1	1	1	0	GvpH
MHYT	PF03707.11	gi|479326935|ref|YP_007866992.1|	-	0.01	15.9	0.6	0.01	15.9	0.4	1.5	1	1	1	2	2	2	0	Bacterial	signalling	protein	N	terminal	repeat
DUF1328	PF07043.8	gi|479326935|ref|YP_007866992.1|	-	0.015	15.2	2.9	0.015	15.2	2.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1328)
QCR10	PF09796.4	gi|479326935|ref|YP_007866992.1|	-	0.069	12.8	0.3	0.11	12.1	0.1	1.5	1	1	0	1	1	1	0	Ubiquinol-cytochrome-c	reductase	complex	subunit	(QCR10)
DUF996	PF06195.8	gi|479326935|ref|YP_007866992.1|	-	0.2	11.6	8.6	0.22	11.5	5.9	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF996)
DUF2976	PF11190.3	gi|479326935|ref|YP_007866992.1|	-	0.43	10.1	5.8	0.5	9.9	4.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2976)
DUF308	PF03729.8	gi|479326935|ref|YP_007866992.1|	-	0.63	10.0	9.8	0.82	9.7	6.8	1.2	1	0	0	1	1	1	0	Short	repeat	of	unknown	function	(DUF308)
DUF2074	PF09847.4	gi|479326937|ref|YP_007866994.1|	-	1.2e-83	281.3	82.7	1.4e-83	281.1	57.3	1.0	1	0	0	1	1	1	1	Predicted	permease	(DUF2074)
ABC_tran	PF00005.22	gi|479326938|ref|YP_007866995.1|	-	5.5e-21	75.3	0.0	8.9e-21	74.6	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|479326938|ref|YP_007866995.1|	-	2.1e-13	50.8	3.3	3.2e-11	43.7	2.3	2.2	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|479326938|ref|YP_007866995.1|	-	1.2e-05	24.6	0.5	0.0067	15.6	0.3	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|479326938|ref|YP_007866995.1|	-	8.4e-05	22.9	0.1	0.00023	21.5	0.1	1.7	1	1	1	2	2	2	1	AAA	domain
AAA_29	PF13555.1	gi|479326938|ref|YP_007866995.1|	-	9.3e-05	21.8	0.0	0.00017	21.0	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_10	PF12846.2	gi|479326938|ref|YP_007866995.1|	-	0.00077	18.9	0.0	0.55	9.6	0.1	2.2	1	1	0	2	2	2	2	AAA-like	domain
AAA_15	PF13175.1	gi|479326938|ref|YP_007866995.1|	-	0.00098	18.2	0.7	0.075	12.0	0.1	2.1	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA	PF00004.24	gi|479326938|ref|YP_007866995.1|	-	0.0062	16.7	0.1	0.019	15.1	0.0	1.8	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF258	PF03193.11	gi|479326938|ref|YP_007866995.1|	-	0.013	14.7	0.1	0.021	14.0	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_30	PF13604.1	gi|479326938|ref|YP_007866995.1|	-	0.014	14.9	0.0	0.054	13.0	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
STAS	PF01740.16	gi|479326938|ref|YP_007866995.1|	-	0.024	14.0	0.0	0.038	13.4	0.0	1.5	1	0	0	1	1	1	0	STAS	domain
NACHT	PF05729.7	gi|479326938|ref|YP_007866995.1|	-	0.038	13.6	0.1	2.3	7.8	0.0	2.6	3	0	0	3	3	3	0	NACHT	domain
AAA_16	PF13191.1	gi|479326938|ref|YP_007866995.1|	-	0.046	13.6	0.1	0.14	12.1	0.0	1.8	2	0	0	2	2	2	0	AAA	ATPase	domain
MukB	PF04310.7	gi|479326938|ref|YP_007866995.1|	-	0.05	12.9	0.0	0.15	11.3	0.0	1.7	2	0	0	2	2	2	0	MukB	N-terminal
MutS_V	PF00488.16	gi|479326938|ref|YP_007866995.1|	-	0.081	12.3	0.0	5.4	6.3	0.0	2.3	2	0	0	2	2	2	0	MutS	domain	V
AAA_22	PF13401.1	gi|479326938|ref|YP_007866995.1|	-	0.11	12.6	0.2	0.51	10.4	0.1	2.1	1	1	0	1	1	1	0	AAA	domain
PCMT	PF01135.14	gi|479326939|ref|YP_007866996.1|	-	1.8e-40	138.6	0.0	2.5e-40	138.2	0.0	1.1	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
RrnaAD	PF00398.15	gi|479326939|ref|YP_007866996.1|	-	4.8e-09	35.6	0.1	1.2e-08	34.2	0.0	1.6	1	1	1	2	2	2	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_18	PF12847.2	gi|479326939|ref|YP_007866996.1|	-	2.7e-07	31.1	0.0	4.8e-07	30.3	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|479326939|ref|YP_007866996.1|	-	3.1e-05	23.6	0.0	4.6e-05	23.0	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Met_10	PF02475.11	gi|479326939|ref|YP_007866996.1|	-	4.4e-05	23.1	0.1	0.00013	21.5	0.0	1.7	2	0	0	2	2	2	1	Met-10+	like-protein
Methyltransf_23	PF13489.1	gi|479326939|ref|YP_007866996.1|	-	0.00041	20.1	0.0	0.00073	19.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|479326939|ref|YP_007866996.1|	-	0.0022	17.3	0.0	0.0036	16.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
DOT1	PF08123.8	gi|479326939|ref|YP_007866996.1|	-	0.0041	16.4	0.0	0.0063	15.8	0.0	1.2	1	0	0	1	1	1	1	Histone	methylation	protein	DOT1
Methyltransf_26	PF13659.1	gi|479326939|ref|YP_007866996.1|	-	0.0089	16.0	0.0	0.013	15.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_3	PF01596.12	gi|479326939|ref|YP_007866996.1|	-	0.016	14.2	0.1	0.03	13.3	0.0	1.4	1	0	0	1	1	1	0	O-methyltransferase
Methyltransf_11	PF08241.7	gi|479326939|ref|YP_007866996.1|	-	0.019	15.4	0.0	0.035	14.5	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_4	PF02390.12	gi|479326939|ref|YP_007866996.1|	-	0.02	13.9	0.0	0.043	12.8	0.0	1.6	1	0	0	1	1	1	0	Putative	methyltransferase
CMAS	PF02353.15	gi|479326939|ref|YP_007866996.1|	-	0.038	13.0	0.0	0.051	12.6	0.0	1.2	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
Methyltransf_25	PF13649.1	gi|479326939|ref|YP_007866996.1|	-	0.058	13.7	0.0	0.1	12.9	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
PrmA	PF06325.8	gi|479326939|ref|YP_007866996.1|	-	0.061	12.4	0.0	0.078	12.0	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
TENA_THI-4	PF03070.11	gi|479326940|ref|YP_007866997.1|	-	2e-42	145.3	4.1	2.3e-42	145.1	2.8	1.0	1	0	0	1	1	1	1	TENA/THI-4/PQQC	family
Aminotran_5	PF00266.14	gi|479326941|ref|YP_007866998.1|	-	8.1e-37	126.8	0.0	1.1e-36	126.4	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-V
PRP4	PF08799.6	gi|479326941|ref|YP_007866998.1|	-	0.055	12.7	0.5	0.12	11.6	0.4	1.6	1	0	0	1	1	1	0	pre-mRNA	processing	factor	4	(PRP4)	like
DsrH	PF04077.7	gi|479326941|ref|YP_007866998.1|	-	0.11	12.2	0.0	0.39	10.4	0.0	2.0	2	0	0	2	2	2	0	DsrH	like	protein
Rib_5-P_isom_A	PF06026.9	gi|479326942|ref|YP_007866999.1|	-	0.043	13.1	0.2	0.049	12.9	0.1	1.1	1	0	0	1	1	1	0	Ribose	5-phosphate	isomerase	A	(phosphoriboisomerase	A)
K-box	PF01486.12	gi|479326942|ref|YP_007866999.1|	-	0.11	12.3	3.8	0.091	12.5	1.8	1.4	2	0	0	2	2	2	0	K-box	region
Borrelia_lipo_2	PF06238.6	gi|479326942|ref|YP_007866999.1|	-	1.3	9.1	7.0	3.9	7.5	0.3	2.2	1	1	1	2	2	2	0	Borrelia	burgdorferi	BBR25	lipoprotein
EVE	PF01878.13	gi|479326943|ref|YP_007867000.1|	-	2.5e-17	63.2	0.3	2.8e-17	63.0	0.2	1.0	1	0	0	1	1	1	1	EVE	domain
DUF2197	PF09963.4	gi|479326943|ref|YP_007867000.1|	-	0.039	13.9	0.1	0.078	12.9	0.1	1.5	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2197)
Y1_Tnp	PF01797.11	gi|479326944|ref|YP_007867001.1|	-	1.6e-38	131.2	2.0	1.8e-38	131.0	1.4	1.0	1	0	0	1	1	1	1	Transposase	IS200	like
FBP	PF07299.6	gi|479326944|ref|YP_007867001.1|	-	0.083	12.2	0.2	0.12	11.7	0.2	1.2	1	0	0	1	1	1	0	Fibronectin-binding	protein	(FBP)
DAO	PF01266.19	gi|479326944|ref|YP_007867001.1|	-	0.12	11.1	0.0	0.13	11.1	0.0	1.1	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
OrfB_IS605	PF01385.14	gi|479326945|ref|YP_007867002.1|	-	4.9e-37	127.5	5.5	9e-37	126.6	3.8	1.4	1	0	0	1	1	1	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.6	gi|479326945|ref|YP_007867002.1|	-	1.6e-27	94.9	0.2	4.2e-27	93.5	0.2	1.8	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
HTH_OrfB_IS605	PF12323.3	gi|479326945|ref|YP_007867002.1|	-	1.3e-08	34.0	0.2	2.8e-08	32.9	0.1	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
TF_Zn_Ribbon	PF08271.7	gi|479326945|ref|YP_007867002.1|	-	0.028	13.7	1.9	5.5	6.3	0.0	2.9	3	0	0	3	3	3	0	TFIIB	zinc-binding
UPF0547	PF10571.4	gi|479326945|ref|YP_007867002.1|	-	0.045	13.4	1.0	10	5.9	0.1	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
DUF585	PF04522.7	gi|479326945|ref|YP_007867002.1|	-	0.064	12.6	0.0	0.1	11.9	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF585)
DZR	PF12773.2	gi|479326945|ref|YP_007867002.1|	-	0.081	12.7	0.2	0.15	11.9	0.2	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
zinc_ribbon_2	PF13240.1	gi|479326945|ref|YP_007867002.1|	-	0.16	11.4	0.8	14	5.3	0.1	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|479326945|ref|YP_007867002.1|	-	0.18	11.0	3.1	5.5	6.3	0.1	2.2	1	1	2	3	3	3	0	zinc-ribbon	domain
DUF1610	PF07754.6	gi|479326945|ref|YP_007867002.1|	-	0.77	9.9	4.2	0.24	11.5	0.3	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
TIM	PF00121.13	gi|479326947|ref|YP_007867004.1|	-	2.9e-27	95.2	0.1	1.1e-20	73.7	0.0	2.0	2	0	0	2	2	2	2	Triosephosphate	isomerase
ThiG	PF05690.9	gi|479326947|ref|YP_007867004.1|	-	2.6e-05	23.4	0.3	4.1e-05	22.7	0.2	1.3	1	0	0	1	1	1	1	Thiazole	biosynthesis	protein	ThiG
FMN_dh	PF01070.13	gi|479326947|ref|YP_007867004.1|	-	3.8e-05	22.7	0.1	5.9e-05	22.0	0.1	1.2	1	0	0	1	1	1	1	FMN-dependent	dehydrogenase
NMO	PF03060.10	gi|479326947|ref|YP_007867004.1|	-	0.00012	21.3	0.0	0.00016	20.9	0.0	1.3	1	0	0	1	1	1	1	Nitronate	monooxygenase
His_biosynth	PF00977.16	gi|479326947|ref|YP_007867004.1|	-	0.00016	21.0	0.9	0.00074	18.8	0.1	2.2	3	0	0	3	3	3	1	Histidine	biosynthesis	protein
IGPS	PF00218.16	gi|479326947|ref|YP_007867004.1|	-	0.0003	19.9	0.0	0.00045	19.3	0.0	1.2	1	0	0	1	1	1	1	Indole-3-glycerol	phosphate	synthase
DUF561	PF04481.7	gi|479326947|ref|YP_007867004.1|	-	0.0011	18.0	2.4	0.0069	15.3	0.2	2.6	2	1	1	3	3	3	1	Protein	of	unknown	function	(DUF561)
Glu_synthase	PF01645.12	gi|479326947|ref|YP_007867004.1|	-	0.0016	17.3	0.2	0.0024	16.8	0.1	1.2	1	0	0	1	1	1	1	Conserved	region	in	glutamate	synthase
DHO_dh	PF01180.16	gi|479326947|ref|YP_007867004.1|	-	0.0022	17.0	1.4	0.0027	16.7	0.1	1.7	2	0	0	2	2	2	1	Dihydroorotate	dehydrogenase
Trp_syntA	PF00290.15	gi|479326947|ref|YP_007867004.1|	-	0.012	14.1	0.6	0.023	13.2	0.4	1.5	1	0	0	1	1	1	0	Tryptophan	synthase	alpha	chain
G3P_antiterm	PF04309.7	gi|479326947|ref|YP_007867004.1|	-	0.013	14.5	0.3	0.013	14.5	0.2	1.7	2	0	0	2	2	2	0	Glycerol-3-phosphate	responsive	antiterminator
PcrB	PF01884.12	gi|479326947|ref|YP_007867004.1|	-	0.018	14.2	1.4	0.018	14.2	1.0	1.5	2	0	0	2	2	2	0	PcrB	family
IMPDH	PF00478.20	gi|479326947|ref|YP_007867004.1|	-	0.04	12.8	0.4	0.055	12.3	0.3	1.2	1	0	0	1	1	1	0	IMP	dehydrogenase	/	GMP	reductase	domain
NanE	PF04131.9	gi|479326947|ref|YP_007867004.1|	-	0.11	11.4	0.5	0.21	10.5	0.1	1.6	2	0	0	2	2	2	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
DUF429	PF04250.8	gi|479326948|ref|YP_007867005.1|	-	2.4e-25	89.0	0.5	4.8e-24	84.7	0.3	2.0	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF429)
DUF762	PF05555.6	gi|479326948|ref|YP_007867005.1|	-	0.074	12.2	0.3	0.092	11.9	0.2	1.3	1	0	0	1	1	1	0	Coxiella	burnetii	protein	of	unknown	function	(DUF762)
Polysacc_synt_C	PF14667.1	gi|479326949|ref|YP_007867006.1|	-	0.81	9.4	29.1	0.043	13.6	5.9	2.1	1	1	1	2	2	2	0	Polysaccharide	biosynthesis	C-terminal	domain
Tmemb_14	PF03647.8	gi|479326949|ref|YP_007867006.1|	-	2.3	8.6	12.1	0.44	10.9	6.0	1.6	2	0	0	2	2	2	0	Transmembrane	proteins	14C
TctB	PF07331.6	gi|479326949|ref|YP_007867006.1|	-	2.6	7.6	22.7	3.9	7.1	15.7	1.3	1	0	0	1	1	1	0	Tripartite	tricarboxylate	transporter	TctB	family
Yip1	PF04893.12	gi|479326949|ref|YP_007867006.1|	-	3.5	7.1	33.0	4.3	6.8	22.0	1.7	1	1	0	1	1	1	0	Yip1	domain
ABC2_membrane_5	PF13346.1	gi|479326949|ref|YP_007867006.1|	-	8.8	5.5	29.7	12	5.1	20.6	1.1	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
Citrate_synt	PF00285.16	gi|479326950|ref|YP_007867007.1|	-	2.5e-126	421.1	0.0	2.8e-126	421.0	0.0	1.0	1	0	0	1	1	1	1	Citrate	synthase
CBS	PF00571.23	gi|479326951|ref|YP_007867008.1|	-	4.8e-31	106.2	1.0	3.5e-16	58.7	0.1	2.1	2	0	0	2	2	2	2	CBS	domain
IF3_N	PF05198.11	gi|479326951|ref|YP_007867008.1|	-	0.017	15.0	0.4	8.2	6.4	0.1	2.6	2	1	0	2	2	2	0	Translation	initiation	factor	IF-3,	N-terminal	domain
Acetyltransf_10	PF13673.1	gi|479326951|ref|YP_007867008.1|	-	0.019	15.1	0.0	0.053	13.6	0.0	1.6	1	1	0	2	2	2	0	Acetyltransferase	(GNAT)	domain
DUF896	PF05979.7	gi|479326951|ref|YP_007867008.1|	-	0.027	14.0	0.3	2.1	7.9	0.1	2.3	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF896)
Acetyltransf_7	PF13508.1	gi|479326951|ref|YP_007867008.1|	-	0.034	14.3	0.0	0.079	13.1	0.0	1.6	2	0	0	2	2	2	0	Acetyltransferase	(GNAT)	domain
DUF3659	PF12396.3	gi|479326951|ref|YP_007867008.1|	-	0.038	13.6	2.3	1.7	8.3	0.0	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3659)
PRC	PF05239.11	gi|479326951|ref|YP_007867008.1|	-	0.15	11.9	2.0	0.18	11.6	0.4	1.9	2	0	0	2	2	2	0	PRC-barrel	domain
PEP_mutase	PF13714.1	gi|479326952|ref|YP_007867009.1|	-	9e-59	198.5	0.4	1.1e-58	198.3	0.2	1.1	1	0	0	1	1	1	1	Phosphoenolpyruvate	phosphomutase
ICL	PF00463.16	gi|479326952|ref|YP_007867009.1|	-	1.6e-13	49.7	0.8	3.8e-13	48.5	0.4	1.7	1	1	1	2	2	2	1	Isocitrate	lyase	family
ThiG	PF05690.9	gi|479326952|ref|YP_007867009.1|	-	0.071	12.1	1.1	0.16	11.0	0.3	2.1	2	1	0	2	2	2	0	Thiazole	biosynthesis	protein	ThiG
Pantoate_transf	PF02548.10	gi|479326952|ref|YP_007867009.1|	-	0.078	12.0	0.1	0.32	10.0	0.0	1.9	1	1	1	2	2	2	0	Ketopantoate	hydroxymethyltransferase
DUF881	PF05949.7	gi|479326952|ref|YP_007867009.1|	-	0.083	12.3	0.0	0.16	11.4	0.0	1.4	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF881)
MmgE_PrpD	PF03972.9	gi|479326953|ref|YP_007867010.1|	-	4.1e-104	348.2	0.0	4.7e-104	348.0	0.0	1.0	1	0	0	1	1	1	1	MmgE/PrpD	family
Ldh_1_N	PF00056.18	gi|479326954|ref|YP_007867011.1|	-	7.9e-29	100.2	0.0	1.6e-28	99.3	0.0	1.5	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	NAD	binding	domain
Ldh_1_C	PF02866.13	gi|479326954|ref|YP_007867011.1|	-	1.5e-13	50.8	0.0	2.3e-13	50.2	0.0	1.3	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	alpha/beta	C-terminal	domain
F420_oxidored	PF03807.12	gi|479326954|ref|YP_007867011.1|	-	0.00036	20.9	0.1	0.00099	19.4	0.0	1.8	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_2	PF03446.10	gi|479326954|ref|YP_007867011.1|	-	0.071	12.9	0.0	0.15	11.8	0.0	1.7	1	1	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Epimerase	PF01370.16	gi|479326955|ref|YP_007867012.1|	-	4.4e-20	72.1	0.0	1.1e-19	70.8	0.0	1.6	1	1	1	2	2	2	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|479326955|ref|YP_007867012.1|	-	3.1e-07	29.5	0.0	4.5e-06	25.7	0.0	2.4	2	1	0	2	2	2	1	RmlD	substrate	binding	domain
UDPG_MGDP_dh_N	PF03721.9	gi|479326955|ref|YP_007867012.1|	-	9.4e-05	21.8	0.0	0.00018	20.9	0.0	1.5	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
adh_short	PF00106.20	gi|479326955|ref|YP_007867012.1|	-	0.00065	19.6	0.0	0.0015	18.4	0.0	1.5	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|479326955|ref|YP_007867012.1|	-	0.0047	16.6	0.0	0.008	15.8	0.0	1.3	1	0	0	1	1	1	1	KR	domain
Polysacc_synt_2	PF02719.10	gi|479326955|ref|YP_007867012.1|	-	0.0062	15.4	0.1	0.014	14.3	0.0	1.6	2	0	0	2	2	2	1	Polysaccharide	biosynthesis	protein
NAD_binding_10	PF13460.1	gi|479326955|ref|YP_007867012.1|	-	0.011	15.7	0.0	0.02	14.8	0.0	1.4	1	0	0	1	1	1	0	NADH(P)-binding
DAO	PF01266.19	gi|479326955|ref|YP_007867012.1|	-	0.041	12.7	0.2	0.064	12.1	0.1	1.2	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
Glyco_transf_28	PF03033.15	gi|479326955|ref|YP_007867012.1|	-	0.051	13.3	0.1	0.16	11.7	0.0	1.9	2	1	0	2	2	2	0	Glycosyltransferase	family	28	N-terminal	domain
DUF3216	PF11505.3	gi|479326956|ref|YP_007867013.1|	-	0.014	15.1	0.6	0.23	11.3	0.1	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3216)
HTH_24	PF13412.1	gi|479326957|ref|YP_007867014.1|	-	9.3e-22	76.1	0.2	4.1e-11	42.0	0.0	2.4	2	0	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|479326957|ref|YP_007867014.1|	-	1.6e-16	59.5	0.0	6.4e-11	41.6	0.1	2.3	2	0	0	2	2	2	2	AsnC-type	helix-turn-helix	domain
HTH_5	PF01022.15	gi|479326957|ref|YP_007867014.1|	-	4.1e-07	29.5	0.1	0.00032	20.2	0.1	2.5	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_11	PF08279.7	gi|479326957|ref|YP_007867014.1|	-	1.1e-06	28.2	0.8	1.5e-05	24.5	0.1	2.6	3	0	0	3	3	3	1	HTH	domain
HTH_8	PF02954.14	gi|479326957|ref|YP_007867014.1|	-	8.3e-06	25.2	0.2	0.0087	15.5	0.0	2.7	3	0	0	3	3	3	2	Bacterial	regulatory	protein,	Fis	family
MarR	PF01047.17	gi|479326957|ref|YP_007867014.1|	-	9.2e-06	25.2	0.1	0.0044	16.7	0.0	3.0	3	0	0	3	3	3	1	MarR	family
HTH_10	PF04967.7	gi|479326957|ref|YP_007867014.1|	-	1.2e-05	24.8	0.1	0.022	14.3	0.0	2.6	3	0	0	3	3	2	2	HTH	DNA	binding	domain
MarR_2	PF12802.2	gi|479326957|ref|YP_007867014.1|	-	1.3e-05	24.7	0.1	0.19	11.3	0.0	2.3	2	0	0	2	2	2	2	MarR	family
HTH_23	PF13384.1	gi|479326957|ref|YP_007867014.1|	-	2.7e-05	23.6	0.0	0.2	11.3	0.0	2.4	2	0	0	2	2	2	2	Homeodomain-like	domain
HTH_DeoR	PF08220.7	gi|479326957|ref|YP_007867014.1|	-	4.1e-05	23.0	0.0	0.00016	21.1	0.0	2.0	2	0	0	2	2	2	1	DeoR-like	helix-turn-helix	domain
HTH_20	PF12840.2	gi|479326957|ref|YP_007867014.1|	-	0.00017	21.3	0.0	0.11	12.3	0.0	2.3	2	0	0	2	2	2	1	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|479326957|ref|YP_007867014.1|	-	0.00027	20.3	0.3	0.19	11.1	0.0	2.6	3	0	0	3	3	2	1	Sigma-70,	region	4
TrmB	PF01978.14	gi|479326957|ref|YP_007867014.1|	-	0.00034	20.2	1.3	0.012	15.2	0.1	3.2	2	1	1	3	3	3	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_28	PF13518.1	gi|479326957|ref|YP_007867014.1|	-	0.00035	20.5	0.0	1.3	9.1	0.0	2.4	2	0	0	2	2	2	2	Helix-turn-helix	domain
TFIIE_alpha	PF02002.12	gi|479326957|ref|YP_007867014.1|	-	0.002	17.5	1.1	0.012	15.0	0.1	2.4	3	0	0	3	3	2	1	TFIIE	alpha	subunit
NUMOD1	PF07453.8	gi|479326957|ref|YP_007867014.1|	-	0.005	16.6	0.1	0.096	12.5	0.0	3.1	3	0	0	3	3	3	1	NUMOD1	domain
HTH_Mga	PF08280.6	gi|479326957|ref|YP_007867014.1|	-	0.006	16.3	0.1	0.029	14.1	0.1	2.1	2	0	0	2	2	2	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
GerE	PF00196.14	gi|479326957|ref|YP_007867014.1|	-	0.0075	15.5	0.0	0.098	11.9	0.0	2.2	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	luxR	family
Fe_dep_repress	PF01325.14	gi|479326957|ref|YP_007867014.1|	-	0.0087	15.9	0.0	2.7	7.9	0.0	2.5	2	0	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_17	PF12728.2	gi|479326957|ref|YP_007867014.1|	-	0.011	15.9	0.1	0.13	12.5	0.0	2.3	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_38	PF13936.1	gi|479326957|ref|YP_007867014.1|	-	0.011	15.2	0.2	1.1	8.9	0.1	2.5	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_Tnp_ISL3	PF13542.1	gi|479326957|ref|YP_007867014.1|	-	0.019	14.0	0.0	0.44	9.7	0.0	2.2	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	transposase	family	ISL3
GntR	PF00392.16	gi|479326957|ref|YP_007867014.1|	-	0.02	14.3	0.0	0.041	13.3	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
HTH_1	PF00126.22	gi|479326957|ref|YP_007867014.1|	-	0.033	13.9	0.0	2.5	7.9	0.0	2.4	2	0	0	2	2	2	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
Put_DNA-bind_N	PF06971.8	gi|479326957|ref|YP_007867014.1|	-	0.035	13.8	0.3	0.11	12.2	0.0	1.9	2	0	0	2	2	1	0	Putative	DNA-binding	protein	N-terminus
MerR	PF00376.18	gi|479326957|ref|YP_007867014.1|	-	0.04	13.4	0.0	0.13	11.8	0.0	1.9	1	0	0	1	1	1	0	MerR	family	regulatory	protein
Sigma70_r4	PF04545.11	gi|479326957|ref|YP_007867014.1|	-	0.057	12.7	0.0	0.43	9.9	0.0	2.1	2	0	0	2	2	2	0	Sigma-70,	region	4
HTH_40	PF14493.1	gi|479326957|ref|YP_007867014.1|	-	0.13	12.4	0.7	8	6.7	0.0	2.3	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_Crp_2	PF13545.1	gi|479326957|ref|YP_007867014.1|	-	0.14	11.9	0.0	3.8	7.3	0.0	2.3	2	0	0	2	2	2	0	Crp-like	helix-turn-helix	domain
SET_assoc	PF11767.3	gi|479326957|ref|YP_007867014.1|	-	0.16	11.2	2.3	0.29	10.4	0.0	2.4	3	0	0	3	3	3	0	Histone	lysine	methyltransferase	SET	associated
HTH_12	PF08461.5	gi|479326957|ref|YP_007867014.1|	-	0.36	10.5	3.0	0.53	10.0	0.0	2.6	3	1	0	3	3	3	0	Ribonuclease	R	winged-helix	domain
PIN	PF01850.16	gi|479326958|ref|YP_007867015.1|	-	6.3e-19	68.4	0.1	9.7e-19	67.8	0.1	1.3	1	0	0	1	1	1	1	PIN	domain
DUF4411	PF14367.1	gi|479326958|ref|YP_007867015.1|	-	0.00094	18.9	0.6	0.053	13.2	0.0	2.7	1	1	1	3	3	3	1	Domain	of	unknown	function	(DUF4411)
TYW3	PF02676.9	gi|479326958|ref|YP_007867015.1|	-	0.04	13.0	0.1	0.074	12.1	0.0	1.4	2	0	0	2	2	2	0	Methyltransferase	TYW3
Antitoxin-MazE	PF04014.13	gi|479326959|ref|YP_007867016.1|	-	1.8e-12	46.6	0.3	2.4e-12	46.3	0.2	1.2	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
DUF2138	PF09909.4	gi|479326960|ref|YP_007867017.1|	-	0.11	10.6	0.0	0.11	10.6	0.0	1.0	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2138)
bZIP_2	PF07716.10	gi|479326960|ref|YP_007867017.1|	-	0.2	11.5	3.1	2.3	8.1	0.0	2.3	2	0	0	2	2	2	0	Basic	region	leucine	zipper
Peptidase_M61	PF05299.7	gi|479326961|ref|YP_007867018.1|	-	1.3e-40	138.1	0.5	2.1e-40	137.5	0.3	1.3	1	0	0	1	1	1	1	M61	glycyl	aminopeptidase
Peptidase_MA_2	PF13485.1	gi|479326961|ref|YP_007867018.1|	-	4.8e-08	33.0	0.1	7.8e-08	32.4	0.1	1.3	1	0	0	1	1	1	1	Peptidase	MA	superfamily
PDZ	PF00595.19	gi|479326961|ref|YP_007867018.1|	-	1.9e-05	24.7	0.2	4e-05	23.7	0.2	1.4	1	0	0	1	1	1	1	PDZ	domain	(Also	known	as	DHR	or	GLGF)
PDZ_2	PF13180.1	gi|479326961|ref|YP_007867018.1|	-	0.00041	20.1	0.0	0.00094	19.0	0.0	1.6	1	0	0	1	1	1	1	PDZ	domain
Phage_int_SAM_3	PF14659.1	gi|479326961|ref|YP_007867018.1|	-	0.028	14.6	1.1	0.028	14.6	0.8	2.3	2	0	0	2	2	2	0	Phage	integrase,	N-terminal	SAM-like	domain
Fer4	PF00037.22	gi|479326962|ref|YP_007867019.1|	-	3.7e-14	51.6	13.9	3.5e-07	29.5	4.1	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|479326962|ref|YP_007867019.1|	-	7.4e-12	45.3	6.9	9.6e-12	44.9	4.8	1.1	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|479326962|ref|YP_007867019.1|	-	6.2e-10	38.5	14.1	4.1e-06	26.4	3.8	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|479326962|ref|YP_007867019.1|	-	4.9e-09	35.8	18.7	4.9e-07	29.4	5.4	1.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|479326962|ref|YP_007867019.1|	-	5.5e-09	36.2	8.4	8.3e-09	35.6	5.8	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|479326962|ref|YP_007867019.1|	-	3.3e-08	33.2	5.5	4.2e-08	32.9	3.8	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|479326962|ref|YP_007867019.1|	-	4.8e-08	32.9	10.5	1.2e-06	28.4	4.2	1.6	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|479326962|ref|YP_007867019.1|	-	1.8e-06	27.7	8.3	0.017	15.3	2.3	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|479326962|ref|YP_007867019.1|	-	1.9e-06	27.4	11.5	0.0068	16.2	0.6	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|479326962|ref|YP_007867019.1|	-	5.2e-06	26.7	3.6	0.0019	18.5	0.6	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|479326962|ref|YP_007867019.1|	-	1.1e-05	25.6	14.6	0.0077	16.7	4.6	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|479326962|ref|YP_007867019.1|	-	2.5e-05	24.5	0.6	0.23	11.8	0.3	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|479326962|ref|YP_007867019.1|	-	4e-05	23.9	9.9	0.018	15.4	0.3	2.3	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_15	PF13459.1	gi|479326962|ref|YP_007867019.1|	-	4.1e-05	24.0	9.4	0.046	14.2	0.1	2.4	2	1	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_16	PF13484.1	gi|479326962|ref|YP_007867019.1|	-	0.00037	21.1	8.1	0.0073	17.0	1.7	2.2	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
HTH_34	PF13601.1	gi|479326963|ref|YP_007867020.1|	-	8.4e-06	25.7	0.6	1.5e-05	24.9	0.4	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_27	PF13463.1	gi|479326963|ref|YP_007867020.1|	-	0.00082	19.6	0.3	0.0042	17.3	0.1	2.0	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|479326963|ref|YP_007867020.1|	-	0.0025	17.4	1.5	0.0083	15.8	0.4	2.1	1	1	1	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
Phage_rep_org_N	PF09681.5	gi|479326963|ref|YP_007867020.1|	-	0.0063	16.0	0.5	0.0089	15.5	0.3	1.2	1	0	0	1	1	1	1	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
Sulfolobus_pRN	PF05584.6	gi|479326963|ref|YP_007867020.1|	-	0.0067	16.3	0.5	0.049	13.5	0.1	2.1	2	0	0	2	2	2	1	Sulfolobus	plasmid	regulatory	protein
HTH_20	PF12840.2	gi|479326963|ref|YP_007867020.1|	-	0.011	15.4	0.0	0.025	14.3	0.0	1.6	2	0	0	2	2	2	0	Helix-turn-helix	domain
GAS	PF13851.1	gi|479326963|ref|YP_007867020.1|	-	0.026	13.7	1.5	0.13	11.4	0.9	1.8	1	1	0	1	1	1	0	Growth-arrest	specific	micro-tubule	binding
MarR_2	PF12802.2	gi|479326963|ref|YP_007867020.1|	-	0.048	13.3	0.0	0.095	12.3	0.0	1.4	1	0	0	1	1	1	0	MarR	family
z-alpha	PF02295.12	gi|479326963|ref|YP_007867020.1|	-	0.06	13.1	0.8	0.24	11.1	0.1	2.1	2	0	0	2	2	2	0	Adenosine	deaminase	z-alpha	domain
DUF1495	PF07381.6	gi|479326963|ref|YP_007867020.1|	-	0.063	12.9	0.4	0.65	9.6	0.3	2.2	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain	(DUF1495)
EAP30	PF04157.11	gi|479326963|ref|YP_007867020.1|	-	0.071	12.2	0.2	3.7	6.6	0.0	2.0	2	0	0	2	2	2	0	EAP30/Vps36	family
DAGK_acc	PF00609.14	gi|479326964|ref|YP_007867021.1|	-	0.051	13.7	0.2	0.081	13.0	0.1	1.2	1	0	0	1	1	1	0	Diacylglycerol	kinase	accessory	domain
Cdc6_C	PF09079.6	gi|479326964|ref|YP_007867021.1|	-	0.12	12.0	0.4	0.5	10.1	0.0	2.1	3	0	0	3	3	3	0	CDC6,	C	terminal
SfsA	PF03749.8	gi|479326965|ref|YP_007867022.1|	-	4.6e-56	189.6	0.0	5.6e-56	189.4	0.0	1.1	1	0	0	1	1	1	1	Sugar	fermentation	stimulation	protein
DUF3350	PF11830.3	gi|479326965|ref|YP_007867022.1|	-	0.12	12.4	0.0	0.2	11.7	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3350)
DUF929	PF06053.6	gi|479326966|ref|YP_007867023.1|	-	2.6e-79	265.8	15.6	2.9e-79	265.6	10.8	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF929)
DUF3753	PF12575.3	gi|479326966|ref|YP_007867023.1|	-	0.12	12.1	0.2	0.28	11.0	0.1	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3753)
VIT1	PF01988.14	gi|479326968|ref|YP_007867025.1|	-	2.7e-46	157.7	9.0	2.7e-46	157.7	6.2	1.8	2	0	0	2	2	2	1	VIT	family
Rubrerythrin	PF02915.12	gi|479326968|ref|YP_007867025.1|	-	0.01	16.1	0.3	0.019	15.3	0.2	1.4	1	0	0	1	1	1	0	Rubrerythrin
DUF3311	PF11755.3	gi|479326970|ref|YP_007867027.1|	-	0.012	15.1	1.2	0.012	15.1	0.8	3.1	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3311)
DUF4212	PF13937.1	gi|479326970|ref|YP_007867027.1|	-	8.5	6.4	8.5	2.8	7.9	4.0	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4212)
Nitroreductase	PF00881.19	gi|479326971|ref|YP_007867028.1|	-	9e-33	113.4	0.0	1.1e-32	113.1	0.0	1.1	1	0	0	1	1	1	1	Nitroreductase	family
DUF1104	PF06518.6	gi|479326971|ref|YP_007867028.1|	-	0.042	13.9	0.1	0.082	13.0	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1104)
Pyr_redox_2	PF07992.9	gi|479326972|ref|YP_007867029.1|	-	1.2e-30	106.9	3.5	2e-29	102.8	2.4	3.7	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|479326972|ref|YP_007867029.1|	-	1.6e-21	76.5	2.5	9.5e-17	61.1	0.1	3.4	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|479326972|ref|YP_007867029.1|	-	6.2e-16	58.3	0.2	2.8e-15	56.3	0.2	2.1	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
GIDA	PF01134.17	gi|479326972|ref|YP_007867029.1|	-	1.9e-15	56.6	1.7	1.3e-06	27.5	0.3	4.1	3	1	0	3	3	3	3	Glucose	inhibited	division	protein	A
NAD_binding_8	PF13450.1	gi|479326972|ref|YP_007867029.1|	-	1.9e-09	37.3	0.4	0.00073	19.5	0.0	2.7	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_3	PF13738.1	gi|479326972|ref|YP_007867029.1|	-	1.2e-07	32.0	1.3	1.9e-05	24.8	0.4	3.5	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|479326972|ref|YP_007867029.1|	-	3.2e-07	29.7	1.8	0.0043	16.1	0.0	2.8	3	0	0	3	3	3	2	FAD	binding	domain
HI0933_like	PF03486.9	gi|479326972|ref|YP_007867029.1|	-	4.8e-07	28.6	3.2	0.00011	20.8	0.1	3.8	3	1	1	4	4	4	1	HI0933-like	protein
FAD_binding_2	PF00890.19	gi|479326972|ref|YP_007867029.1|	-	1.9e-06	27.0	6.5	9.2e-06	24.7	0.1	3.4	4	0	0	4	4	4	1	FAD	binding	domain
FAD_oxidored	PF12831.2	gi|479326972|ref|YP_007867029.1|	-	6e-06	25.5	0.0	0.00057	19.0	0.0	2.4	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
NAD_binding_9	PF13454.1	gi|479326972|ref|YP_007867029.1|	-	2.3e-05	24.2	0.1	0.74	9.5	0.0	3.3	3	0	0	3	3	3	2	FAD-NAD(P)-binding
DAO	PF01266.19	gi|479326972|ref|YP_007867029.1|	-	3.2e-05	23.0	3.9	0.22	10.4	0.0	3.7	3	1	0	4	4	4	2	FAD	dependent	oxidoreductase
Thi4	PF01946.12	gi|479326972|ref|YP_007867029.1|	-	0.00021	20.5	3.8	0.0057	15.7	0.0	3.7	4	1	1	5	5	5	1	Thi4	family
UDPG_MGDP_dh_N	PF03721.9	gi|479326972|ref|YP_007867029.1|	-	0.0019	17.5	0.4	0.53	9.6	0.0	3.6	3	1	1	4	4	4	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Lycopene_cycl	PF05834.7	gi|479326972|ref|YP_007867029.1|	-	0.012	14.5	1.2	2	7.2	0.1	2.9	2	1	1	3	3	3	0	Lycopene	cyclase	protein
TrkA_N	PF02254.13	gi|479326972|ref|YP_007867029.1|	-	0.019	14.9	1.8	3.8	7.5	0.0	3.4	4	0	0	4	4	4	0	TrkA-N	domain
Amino_oxidase	PF01593.19	gi|479326972|ref|YP_007867029.1|	-	0.07	12.1	0.1	33	3.3	0.0	3.4	4	0	0	4	4	4	0	Flavin	containing	amine	oxidoreductase
MFS_1	PF07690.11	gi|479326973|ref|YP_007867030.1|	-	1.8e-16	59.7	57.1	7.7e-15	54.4	39.7	2.1	1	1	0	1	1	1	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|479326973|ref|YP_007867030.1|	-	5.2e-15	54.9	46.7	3.8e-11	42.2	13.5	2.1	1	1	0	2	2	2	2	Sugar	(and	other)	transporter
MFS_2	PF13347.1	gi|479326973|ref|YP_007867030.1|	-	1.4	7.2	32.3	35	2.6	21.3	2.8	1	1	1	2	2	2	0	MFS/sugar	transport	protein
DUF3343	PF11823.3	gi|479326974|ref|YP_007867031.1|	-	0.041	13.1	0.1	0.3	10.3	0.0	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3343)
CENP-M	PF11111.3	gi|479326974|ref|YP_007867031.1|	-	0.062	12.5	0.1	0.08	12.1	0.1	1.1	1	0	0	1	1	1	0	Centromere	protein	M	(CENP-M)
Gln-synt_C	PF00120.19	gi|479326976|ref|YP_007867033.1|	-	5e-77	258.5	0.0	9.1e-77	257.6	0.0	1.4	1	1	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Amidohydro_2	PF04909.9	gi|479326977|ref|YP_007867034.1|	-	2.8e-32	112.3	0.0	3.6e-32	111.9	0.0	1.1	1	0	0	1	1	1	1	Amidohydrolase
TatD_DNase	PF01026.16	gi|479326977|ref|YP_007867034.1|	-	0.00014	21.1	0.0	0.00021	20.5	0.0	1.3	1	0	0	1	1	1	1	TatD	related	DNase
Ovate	PF04844.8	gi|479326977|ref|YP_007867034.1|	-	0.024	14.4	0.2	0.065	13.0	0.1	1.7	1	0	0	1	1	1	0	Transcriptional	repressor,	ovate
YfmQ	PF10787.4	gi|479326977|ref|YP_007867034.1|	-	0.05	12.9	0.5	3.7	6.8	0.0	2.9	3	0	0	3	3	3	0	Uncharacterised	protein	from	bacillus	cereus	group
PNGaseA	PF12222.3	gi|479326978|ref|YP_007867035.1|	-	5.2e-142	473.6	13.1	5.2e-142	473.6	9.1	1.6	2	0	0	2	2	2	1	Peptide	N-acetyl-beta-D-glucosaminyl	asparaginase	amidase	A
Pro-kuma_activ	PF09286.6	gi|479326979|ref|YP_007867036.1|	-	1.4e-10	41.3	0.0	2.5e-10	40.5	0.0	1.4	1	0	0	1	1	1	1	Pro-kumamolisin,	activation	domain
Peptidase_S8	PF00082.17	gi|479326979|ref|YP_007867036.1|	-	1.3e-07	31.1	0.4	2.5e-07	30.1	0.3	1.4	1	0	0	1	1	1	1	Subtilase	family
7kD_DNA_binding	PF02294.13	gi|479326980|ref|YP_007867037.1|	-	1.9e-42	142.7	5.1	2.1e-42	142.6	3.5	1.0	1	0	0	1	1	1	1	7kD	DNA-binding	domain
zf-C2H2_4	PF13894.1	gi|479326981|ref|YP_007867038.1|	-	0.017	15.4	0.5	0.031	14.6	0.3	1.5	1	0	0	1	1	1	0	C2H2-type	zinc	finger
zf-C2H2	PF00096.21	gi|479326981|ref|YP_007867038.1|	-	0.044	14.1	0.3	0.096	13.0	0.2	1.6	1	0	0	1	1	1	0	Zinc	finger,	C2H2	type
AA_permease_2	PF13520.1	gi|479326982|ref|YP_007867039.1|	-	1.2e-27	96.4	62.1	1.6e-27	96.1	43.0	1.1	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|479326982|ref|YP_007867039.1|	-	2.9e-06	25.8	51.2	4.7e-06	25.2	35.5	1.3	1	1	0	1	1	1	1	Amino	acid	permease
DUF3366	PF11846.3	gi|479326982|ref|YP_007867039.1|	-	0.14	12.0	3.2	0.61	9.9	2.2	2.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3366)
Class_IIIsignal	PF04021.7	gi|479326985|ref|YP_007867042.1|	-	1.5	8.6	9.5	0.46	10.2	3.5	2.1	2	0	0	2	2	2	0	Class	III	signal	peptide
YceI	PF04264.8	gi|479326986|ref|YP_007867043.1|	-	0.051	13.5	1.0	0.068	13.1	0.7	1.1	1	0	0	1	1	1	0	YceI-like	domain
Secretin	PF00263.16	gi|479326986|ref|YP_007867043.1|	-	0.14	11.5	7.8	0.18	11.1	5.4	1.1	1	0	0	1	1	1	0	Bacterial	type	II	and	III	secretion	system	protein
PPC	PF04151.10	gi|479326986|ref|YP_007867043.1|	-	3.3	8.7	7.8	0.96	10.4	1.6	2.2	1	1	1	2	2	2	0	Bacterial	pre-peptidase	C-terminal	domain
AAA_21	PF13304.1	gi|479326987|ref|YP_007867044.1|	-	0.26	11.2	8.2	1.6	8.6	5.7	2.0	1	1	0	1	1	1	0	AAA	domain
DUF748	PF05359.6	gi|479326988|ref|YP_007867045.1|	-	0.00054	19.9	0.9	0.00084	19.3	0.6	1.3	1	0	0	1	1	1	1	Domain	of	Unknown	Function	(DUF748)
Toxin_56	PF15534.1	gi|479326988|ref|YP_007867045.1|	-	0.036	14.5	0.8	1.1	9.7	0.5	2.1	1	1	1	2	2	2	0	Putative	toxin	56
DUF3536	PF12055.3	gi|479326988|ref|YP_007867045.1|	-	0.16	11.0	0.1	0.16	11.1	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3536)
E_Pc_C	PF06752.7	gi|479326988|ref|YP_007867045.1|	-	1.1	8.7	9.3	1.3	8.4	6.5	1.1	1	0	0	1	1	1	0	Enhancer	of	Polycomb	C-terminus
PPC	PF04151.10	gi|479326988|ref|YP_007867045.1|	-	3.4	8.6	7.9	0.99	10.4	1.7	2.3	1	1	1	2	2	2	0	Bacterial	pre-peptidase	C-terminal	domain
DUF3040	PF11239.3	gi|479326988|ref|YP_007867045.1|	-	4	7.5	8.4	3.5	7.7	3.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3040)
DUF2203	PF09969.4	gi|479326989|ref|YP_007867046.1|	-	3.8e-34	117.4	0.0	5.5e-34	116.9	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2203)
DUF2114	PF09887.4	gi|479326989|ref|YP_007867046.1|	-	0.15	10.4	0.0	0.16	10.2	0.0	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2114)
Ald_Xan_dh_C2	PF02738.13	gi|479326990|ref|YP_007867047.1|	-	8.8e-154	512.8	0.0	1.1e-153	512.4	0.0	1.0	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|479326990|ref|YP_007867047.1|	-	5.1e-32	110.2	0.0	1.1e-31	109.1	0.0	1.7	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
SpoIIIAH	PF12685.2	gi|479326990|ref|YP_007867047.1|	-	0.036	13.5	0.5	0.064	12.7	0.3	1.4	1	0	0	1	1	1	0	SpoIIIAH-like	protein
Rhodanese	PF00581.15	gi|479326991|ref|YP_007867048.1|	-	2.1e-13	50.5	0.0	3e-13	50.1	0.0	1.2	1	0	0	1	1	1	1	Rhodanese-like	domain
DUF4500	PF14937.1	gi|479326992|ref|YP_007867049.1|	-	0.11	12.3	0.0	0.23	11.3	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4500)
DUF1494	PF07379.6	gi|479326992|ref|YP_007867049.1|	-	0.16	11.8	0.7	0.3	10.9	0.5	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1494)
Herpes_US9	PF06072.6	gi|479326992|ref|YP_007867049.1|	-	0.32	10.8	2.2	0.67	9.8	1.5	1.5	1	0	0	1	1	1	0	Alphaherpesvirus	tegument	protein	US9
Arch_flagellin	PF01917.11	gi|479326992|ref|YP_007867049.1|	-	0.48	10.0	3.5	0.68	9.5	2.4	1.5	1	1	0	1	1	1	0	Archaebacterial	flagellin
Peptidase_M1	PF01433.15	gi|479326993|ref|YP_007867050.1|	-	2e-112	376.1	1.0	2.7e-112	375.7	0.7	1.2	1	0	0	1	1	1	1	Peptidase	family	M1
Peptidase_MA_2	PF13485.1	gi|479326993|ref|YP_007867050.1|	-	1.9e-19	69.9	0.5	1.9e-19	69.9	0.4	2.2	2	0	0	2	2	2	1	Peptidase	MA	superfamily
ERAP1_C	PF11838.3	gi|479326993|ref|YP_007867050.1|	-	1.9e-18	66.7	0.5	3.5e-18	65.9	0.0	1.7	2	1	0	2	2	2	1	ERAP1-like	C-terminal	domain
Helicase_IV_N	PF12462.3	gi|479326993|ref|YP_007867050.1|	-	0.02	14.5	0.1	0.055	13.1	0.0	1.7	2	0	0	2	2	2	0	DNA	helicase	IV	/	RNA	helicase	N	terminal
DUF2265	PF10023.4	gi|479326993|ref|YP_007867050.1|	-	0.023	13.8	0.4	0.047	12.8	0.0	1.6	2	0	0	2	2	2	0	Predicted	aminopeptidase	(DUF2265)
Lipl32	PF12103.3	gi|479326994|ref|YP_007867051.1|	-	0.057	12.8	0.3	0.068	12.6	0.2	1.1	1	0	0	1	1	1	0	Surface	lipoprotein	of	Spirochaetales	order
Bap31	PF05529.7	gi|479326994|ref|YP_007867051.1|	-	0.071	12.5	0.1	0.082	12.3	0.0	1.1	1	0	0	1	1	1	0	B-cell	receptor-associated	protein	31-like
AP_endonuc_2	PF01261.19	gi|479326995|ref|YP_007867052.1|	-	3.3e-25	88.6	0.1	4.5e-25	88.2	0.1	1.1	1	0	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
UvdE	PF03851.9	gi|479326995|ref|YP_007867052.1|	-	0.00083	18.4	0.0	0.001	18.1	0.0	1.2	1	0	0	1	1	1	1	UV-endonuclease	UvdE
DUF1307	PF06998.6	gi|479326995|ref|YP_007867052.1|	-	0.013	15.5	0.0	0.033	14.2	0.0	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1307)
DeoC	PF01791.4	gi|479326995|ref|YP_007867052.1|	-	0.016	14.5	0.2	0.021	14.0	0.2	1.3	1	0	0	1	1	1	0	DeoC/LacD	family	aldolase
Decorin_bind	PF02352.10	gi|479326995|ref|YP_007867052.1|	-	0.058	13.3	1.9	0.072	13.0	0.3	2.0	2	1	0	2	2	2	0	Decorin	binding	protein
Hydrolase_3	PF08282.7	gi|479326996|ref|YP_007867053.1|	-	2e-25	89.8	0.2	5.3e-16	58.9	0.1	2.0	1	1	1	2	2	2	2	haloacid	dehalogenase-like	hydrolase
S6PP	PF05116.8	gi|479326996|ref|YP_007867053.1|	-	7.5e-07	28.6	0.0	0.0029	16.9	0.0	2.1	2	0	0	2	2	2	2	Sucrose-6F-phosphate	phosphohydrolase
HAD	PF12710.2	gi|479326996|ref|YP_007867053.1|	-	0.02	15.0	0.1	0.067	13.3	0.1	1.8	1	1	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
MTS	PF05175.9	gi|479326997|ref|YP_007867054.1|	-	9.8e-12	44.5	0.0	1.2e-11	44.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.1	gi|479326997|ref|YP_007867054.1|	-	3.9e-11	42.7	0.1	5.1e-11	42.3	0.1	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|479326997|ref|YP_007867054.1|	-	8.7e-10	39.1	0.0	1.1e-09	38.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|479326997|ref|YP_007867054.1|	-	1.2e-09	38.1	0.0	1.9e-09	37.5	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|479326997|ref|YP_007867054.1|	-	5.3e-05	22.4	0.0	8.3e-05	21.8	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_25	PF13649.1	gi|479326997|ref|YP_007867054.1|	-	8.2e-05	22.9	0.1	0.00015	22.0	0.1	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
DUF43	PF01861.11	gi|479326997|ref|YP_007867054.1|	-	0.0001	21.3	0.0	0.00027	19.9	0.0	1.5	1	1	1	2	2	2	1	Protein	of	unknown	function	DUF43
Methyltransf_11	PF08241.7	gi|479326997|ref|YP_007867054.1|	-	0.00013	22.4	0.0	0.0002	21.7	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|479326997|ref|YP_007867054.1|	-	0.00038	20.0	0.0	0.00052	19.6	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
TehB	PF03848.9	gi|479326997|ref|YP_007867054.1|	-	0.00047	19.3	0.2	0.001	18.3	0.1	1.5	1	1	0	1	1	1	1	Tellurite	resistance	protein	TehB
Methyltransf_23	PF13489.1	gi|479326997|ref|YP_007867054.1|	-	0.0022	17.7	0.0	0.0036	17.0	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_32	PF13679.1	gi|479326997|ref|YP_007867054.1|	-	0.0061	16.2	0.0	0.0081	15.8	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|479326997|ref|YP_007867054.1|	-	0.0075	15.3	0.0	0.0093	15.0	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_12	PF08242.7	gi|479326997|ref|YP_007867054.1|	-	0.0085	16.5	0.0	0.014	15.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
N6_Mtase	PF02384.11	gi|479326997|ref|YP_007867054.1|	-	0.013	14.6	0.0	3.8	6.5	0.0	2.2	2	0	0	2	2	2	0	N-6	DNA	Methylase
Methyltransf_16	PF10294.4	gi|479326997|ref|YP_007867054.1|	-	0.045	13.1	0.0	0.077	12.4	0.0	1.4	1	0	0	1	1	1	0	Putative	methyltransferase
NodS	PF05401.6	gi|479326997|ref|YP_007867054.1|	-	0.068	12.5	0.0	0.086	12.2	0.0	1.2	1	0	0	1	1	1	0	Nodulation	protein	S	(NodS)
HAD_2	PF13419.1	gi|479326998|ref|YP_007867055.1|	-	4.5e-23	82.3	0.0	5.4e-23	82.1	0.0	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|479326998|ref|YP_007867055.1|	-	1.6e-08	34.1	0.0	1.5e-07	31.0	0.0	2.1	2	0	0	2	2	2	1	HAD-hyrolase-like
Hydrolase	PF00702.21	gi|479326998|ref|YP_007867055.1|	-	2e-07	31.6	0.0	6.6e-06	26.6	0.0	2.0	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.2	gi|479326998|ref|YP_007867055.1|	-	0.00064	19.9	0.1	0.0021	18.2	0.0	1.7	1	1	1	2	2	2	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_6	PF13344.1	gi|479326998|ref|YP_007867055.1|	-	0.071	13.0	0.0	0.72	9.7	0.0	2.2	2	0	0	2	2	2	0	Haloacid	dehalogenase-like	hydrolase
HypA	PF01155.14	gi|479326999|ref|YP_007867056.1|	-	0.00037	20.1	1.4	0.00057	19.5	0.9	1.2	1	1	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
TF_Zn_Ribbon	PF08271.7	gi|479326999|ref|YP_007867056.1|	-	0.018	14.3	0.9	1.1	8.6	0.1	2.3	2	0	0	2	2	2	0	TFIIB	zinc-binding
C1_1	PF00130.17	gi|479326999|ref|YP_007867056.1|	-	0.03	14.0	0.4	0.046	13.4	0.3	1.3	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
Zn-ribbon_8	PF09723.5	gi|479326999|ref|YP_007867056.1|	-	0.042	13.8	4.8	0.12	12.3	3.3	1.7	1	1	0	1	1	1	0	Zinc	ribbon	domain
IBR	PF01485.16	gi|479326999|ref|YP_007867056.1|	-	0.046	13.5	0.4	0.051	13.4	0.2	1.2	1	0	0	1	1	1	0	IBR	domain
zf-C3HC4_3	PF13920.1	gi|479326999|ref|YP_007867056.1|	-	0.05	13.2	2.6	0.074	12.7	1.8	1.3	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
Opy2	PF09463.5	gi|479326999|ref|YP_007867056.1|	-	0.078	13.0	0.6	4.3	7.4	0.2	2.1	2	0	0	2	2	2	0	Opy2	protein
Cys_rich_CPCC	PF14206.1	gi|479326999|ref|YP_007867056.1|	-	0.079	12.5	1.0	0.11	12.0	0.7	1.2	1	0	0	1	1	1	0	Cysteine-rich	CPCC
NRDD	PF13597.1	gi|479326999|ref|YP_007867056.1|	-	0.093	10.7	0.2	0.096	10.7	0.2	1.1	1	0	0	1	1	1	0	Anaerobic	ribonucleoside-triphosphate	reductase
Rubredoxin	PF00301.15	gi|479326999|ref|YP_007867056.1|	-	0.093	12.6	4.2	3.7	7.4	2.9	2.2	1	1	0	1	1	1	0	Rubredoxin
TFIIS_C	PF01096.13	gi|479326999|ref|YP_007867056.1|	-	0.093	12.3	1.3	7.1	6.3	0.0	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
A2L_zn_ribbon	PF08792.5	gi|479326999|ref|YP_007867056.1|	-	0.097	12.1	1.4	4.3	6.9	0.0	2.3	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
DUF2072	PF09845.4	gi|479326999|ref|YP_007867056.1|	-	0.17	11.8	1.1	0.27	11.1	0.7	1.3	1	0	0	1	1	1	0	Zn-ribbon	containing	protein	(DUF2072)
UPF0547	PF10571.4	gi|479326999|ref|YP_007867056.1|	-	0.19	11.4	4.2	0.48	10.1	0.1	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
DZR	PF12773.2	gi|479326999|ref|YP_007867056.1|	-	0.23	11.3	2.7	0.56	10.0	1.9	1.6	1	1	0	1	1	1	0	Double	zinc	ribbon
zf-RING_5	PF14634.1	gi|479326999|ref|YP_007867056.1|	-	0.23	11.2	2.5	0.38	10.5	1.7	1.4	1	0	0	1	1	1	0	zinc-RING	finger	domain
zf-AN1	PF01428.11	gi|479326999|ref|YP_007867056.1|	-	0.26	11.2	2.0	1.3	8.9	0.1	2.1	1	1	1	2	2	2	0	AN1-like	Zinc	finger
zf-H2C2_2	PF13465.1	gi|479326999|ref|YP_007867056.1|	-	0.44	10.9	6.5	0.61	10.4	0.6	2.3	2	1	0	2	2	2	0	Zinc-finger	double	domain
zf-C3HC4_2	PF13923.1	gi|479326999|ref|YP_007867056.1|	-	0.55	10.3	3.2	0.98	9.4	2.2	1.4	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
zf-trcl	PF13451.1	gi|479326999|ref|YP_007867056.1|	-	1.6	8.4	7.2	3.1	7.4	0.6	2.3	1	1	1	2	2	2	0	Probable	zinc-binding	domain
zinc_ribbon_5	PF13719.1	gi|479326999|ref|YP_007867056.1|	-	3.5	7.2	6.0	87	2.8	4.2	2.3	1	1	0	1	1	1	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|479326999|ref|YP_007867056.1|	-	4.7	7.0	6.4	2.8	7.7	0.3	2.3	1	1	0	1	1	1	0	zinc-ribbon	domain
zf-C2H2	PF00096.21	gi|479326999|ref|YP_007867056.1|	-	5	7.6	5.7	4.5	7.8	0.8	2.4	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
RmlD_sub_bind	PF04321.12	gi|479327000|ref|YP_007867057.1|	-	1.5e-19	70.0	0.0	1.8e-19	69.6	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Epimerase	PF01370.16	gi|479327000|ref|YP_007867057.1|	-	6e-06	25.8	0.0	8.5e-06	25.3	0.0	1.3	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
FAD_binding_4	PF01565.18	gi|479327001|ref|YP_007867058.1|	-	3.4e-33	114.0	0.0	8.4e-33	112.7	0.0	1.7	2	0	0	2	2	2	1	FAD	binding	domain
Fer4_17	PF13534.1	gi|479327001|ref|YP_007867058.1|	-	3.7e-08	33.5	1.9	7.1e-08	32.6	1.3	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|479327001|ref|YP_007867058.1|	-	1.2e-07	31.6	2.3	3.2e-07	30.2	1.7	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|479327001|ref|YP_007867058.1|	-	3.3e-07	30.0	3.0	1.4e-06	27.9	2.5	1.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|479327001|ref|YP_007867058.1|	-	3.3e-07	30.6	5.1	0.00055	20.3	0.0	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|479327001|ref|YP_007867058.1|	-	1e-06	28.9	0.4	0.0054	16.9	0.0	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|479327001|ref|YP_007867058.1|	-	5.6e-06	26.6	4.4	1.3e-05	25.4	3.0	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|479327001|ref|YP_007867058.1|	-	0.002	17.9	5.4	0.21	11.4	0.4	2.5	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
FAD-oxidase_C	PF02913.14	gi|479327001|ref|YP_007867058.1|	-	0.007	15.7	0.0	0.051	12.8	0.0	2.2	2	0	0	2	2	2	1	FAD	linked	oxidases,	C-terminal	domain
Fer4	PF00037.22	gi|479327001|ref|YP_007867058.1|	-	0.0077	15.7	15.1	0.034	13.7	1.8	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|479327001|ref|YP_007867058.1|	-	0.011	15.6	12.0	0.015	15.2	1.3	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|479327001|ref|YP_007867058.1|	-	0.25	12.1	10.3	2.8	8.7	7.5	2.2	1	1	2	3	3	3	0	4Fe-4S	double	cluster	binding	domain
Fer4_20	PF14691.1	gi|479327001|ref|YP_007867058.1|	-	0.57	9.8	1.9	23	4.6	0.2	2.3	2	0	0	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_6	PF12837.2	gi|479327001|ref|YP_007867058.1|	-	3.3	7.7	16.8	0.029	14.2	2.6	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|479327001|ref|YP_007867058.1|	-	5.5	7.7	18.3	1.8	9.3	3.5	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
HIT	PF01230.18	gi|479327002|ref|YP_007867059.1|	-	8.9e-26	90.2	0.0	1.2e-25	89.9	0.0	1.2	1	0	0	1	1	1	1	HIT	domain
DcpS_C	PF11969.3	gi|479327002|ref|YP_007867059.1|	-	1.4e-13	51.1	0.1	2.3e-13	50.3	0.0	1.4	1	1	1	2	2	2	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
CwfJ_C_1	PF04677.10	gi|479327002|ref|YP_007867059.1|	-	0.012	15.2	0.1	0.016	14.8	0.0	1.4	1	1	0	1	1	1	0	Protein	similar	to	CwfJ	C-terminus	1
Asp_protease_2	PF13650.1	gi|479327003|ref|YP_007867060.1|	-	3.9e-05	24.0	0.0	5e-05	23.7	0.0	1.3	1	0	0	1	1	1	1	Aspartyl	protease
gag-asp_proteas	PF13975.1	gi|479327003|ref|YP_007867060.1|	-	0.054	13.3	0.0	0.14	12.0	0.0	1.7	2	1	0	2	2	2	0	gag-polyprotein	putative	aspartyl	protease
RHH_1	PF01402.16	gi|479327004|ref|YP_007867061.1|	-	0.0018	18.1	0.2	0.0033	17.2	0.1	1.4	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
SNARE_assoc	PF09335.6	gi|479327006|ref|YP_007867063.1|	-	2.9e-06	27.4	6.2	2.9e-06	27.4	4.3	1.9	2	1	0	2	2	2	1	SNARE	associated	Golgi	protein
NUDIX	PF00293.23	gi|479327007|ref|YP_007867064.1|	-	1.9e-15	56.7	0.0	2.4e-15	56.3	0.0	1.1	1	0	0	1	1	1	1	NUDIX	domain
Chlor_dismutase	PF06778.7	gi|479327009|ref|YP_007867066.1|	-	2.3e-62	210.1	0.8	2.9e-62	209.8	0.6	1.1	1	0	0	1	1	1	1	Chlorite	dismutase
Drf_GBD	PF06371.8	gi|479327010|ref|YP_007867067.1|	-	0.11	11.8	0.0	0.26	10.6	0.0	1.6	1	0	0	1	1	1	0	Diaphanous	GTPase-binding	Domain
NTPase_1	PF03266.10	gi|479327011|ref|YP_007867068.1|	-	1.3e-50	171.4	0.2	1.6e-50	171.1	0.1	1.1	1	0	0	1	1	1	1	NTPase
AAA	PF00004.24	gi|479327011|ref|YP_007867068.1|	-	5.7e-06	26.5	0.0	8.1e-06	26.0	0.0	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.1	gi|479327011|ref|YP_007867068.1|	-	1.6e-05	25.0	0.0	4.6e-05	23.5	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
MobB	PF03205.9	gi|479327011|ref|YP_007867068.1|	-	5.6e-05	22.8	0.3	0.00041	20.0	0.0	2.3	3	0	0	3	3	3	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ArgK	PF03308.11	gi|479327011|ref|YP_007867068.1|	-	0.00014	20.7	0.0	0.00033	19.5	0.0	1.6	2	0	0	2	2	2	1	ArgK	protein
AAA_18	PF13238.1	gi|479327011|ref|YP_007867068.1|	-	0.00017	21.8	0.1	0.00026	21.2	0.1	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|479327011|ref|YP_007867068.1|	-	0.0003	21.5	0.1	0.00044	21.0	0.1	1.6	1	1	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|479327011|ref|YP_007867068.1|	-	0.00033	20.4	0.2	0.00063	19.5	0.1	1.4	1	1	0	1	1	1	1	Archaeal	ATPase
CbiA	PF01656.18	gi|479327011|ref|YP_007867068.1|	-	0.00038	19.9	0.6	0.0019	17.6	0.4	2.0	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_16	PF13191.1	gi|479327011|ref|YP_007867068.1|	-	0.00092	19.2	0.0	0.0017	18.3	0.0	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
IstB_IS21	PF01695.12	gi|479327011|ref|YP_007867068.1|	-	0.00099	18.5	0.1	0.8	9.0	0.0	2.1	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
AAA_14	PF13173.1	gi|479327011|ref|YP_007867068.1|	-	0.0016	18.3	0.3	0.02	14.7	0.2	2.2	1	1	0	1	1	1	1	AAA	domain
RuvB_N	PF05496.7	gi|479327011|ref|YP_007867068.1|	-	0.0016	17.5	0.0	0.4	9.6	0.0	2.2	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
Pox_A32	PF04665.7	gi|479327011|ref|YP_007867068.1|	-	0.0017	17.6	0.1	0.078	12.2	0.0	2.1	2	0	0	2	2	2	1	Poxvirus	A32	protein
DUF2075	PF09848.4	gi|479327011|ref|YP_007867068.1|	-	0.0017	17.3	0.1	0.0021	17.0	0.1	1.4	1	1	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_10	PF12846.2	gi|479327011|ref|YP_007867068.1|	-	0.0021	17.5	0.0	0.0027	17.1	0.0	1.2	1	0	0	1	1	1	1	AAA-like	domain
AAA_28	PF13521.1	gi|479327011|ref|YP_007867068.1|	-	0.0024	17.8	0.0	0.0034	17.3	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|479327011|ref|YP_007867068.1|	-	0.0027	17.4	0.0	0.0095	15.6	0.0	1.9	3	0	0	3	3	2	1	Part	of	AAA	domain
AAA_26	PF13500.1	gi|479327011|ref|YP_007867068.1|	-	0.006	16.1	0.0	0.012	15.2	0.0	1.4	2	0	0	2	2	1	1	AAA	domain
MMR_HSR1	PF01926.18	gi|479327011|ref|YP_007867068.1|	-	0.0086	16.0	1.4	0.03	14.2	0.9	1.9	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
AAA_24	PF13479.1	gi|479327011|ref|YP_007867068.1|	-	0.01	15.4	0.8	0.051	13.1	0.1	2.1	2	1	0	2	2	2	0	AAA	domain
NACHT	PF05729.7	gi|479327011|ref|YP_007867068.1|	-	0.013	15.1	0.0	0.017	14.7	0.0	1.4	1	1	0	1	1	1	0	NACHT	domain
APS_kinase	PF01583.15	gi|479327011|ref|YP_007867068.1|	-	0.013	15.1	0.0	0.024	14.2	0.0	1.4	1	0	0	1	1	1	0	Adenylylsulphate	kinase
DAP3	PF10236.4	gi|479327011|ref|YP_007867068.1|	-	0.014	14.3	0.0	0.024	13.5	0.0	1.3	1	0	0	1	1	1	0	Mitochondrial	ribosomal	death-associated	protein	3
ABC_tran	PF00005.22	gi|479327011|ref|YP_007867068.1|	-	0.015	15.5	0.5	0.05	13.9	0.2	2.1	2	1	0	2	2	1	0	ABC	transporter
AAA_30	PF13604.1	gi|479327011|ref|YP_007867068.1|	-	0.018	14.6	0.0	0.042	13.4	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|479327011|ref|YP_007867068.1|	-	0.022	14.2	0.0	0.033	13.6	0.0	1.3	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
AAA_5	PF07728.9	gi|479327011|ref|YP_007867068.1|	-	0.024	14.3	0.1	0.48	10.1	0.0	2.2	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
cobW	PF02492.14	gi|479327011|ref|YP_007867068.1|	-	0.027	13.9	0.4	0.052	13.0	0.3	1.8	1	1	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
Arf	PF00025.16	gi|479327011|ref|YP_007867068.1|	-	0.029	13.6	0.2	0.11	11.6	0.0	1.8	2	0	0	2	2	2	0	ADP-ribosylation	factor	family
KaiC	PF06745.8	gi|479327011|ref|YP_007867068.1|	-	0.029	13.4	0.2	0.046	12.8	0.1	1.5	1	1	0	1	1	1	0	KaiC
FeoB_N	PF02421.13	gi|479327011|ref|YP_007867068.1|	-	0.029	13.6	0.1	0.056	12.7	0.0	1.5	1	0	0	1	1	1	0	Ferrous	iron	transport	protein	B
KAP_NTPase	PF07693.9	gi|479327011|ref|YP_007867068.1|	-	0.035	13.0	0.0	0.047	12.6	0.0	1.3	1	1	0	1	1	1	0	KAP	family	P-loop	domain
AAA_25	PF13481.1	gi|479327011|ref|YP_007867068.1|	-	0.039	13.3	0.0	0.046	13.1	0.0	1.4	1	1	0	1	1	1	0	AAA	domain
NB-ARC	PF00931.17	gi|479327011|ref|YP_007867068.1|	-	0.042	12.7	0.0	0.047	12.5	0.0	1.2	1	0	0	1	1	1	0	NB-ARC	domain
ArsA_ATPase	PF02374.10	gi|479327011|ref|YP_007867068.1|	-	0.048	12.7	0.0	0.15	11.1	0.0	1.7	2	0	0	2	2	2	0	Anion-transporting	ATPase
Miro	PF08477.8	gi|479327011|ref|YP_007867068.1|	-	0.049	14.1	0.0	0.12	12.8	0.0	1.8	2	1	0	2	2	2	0	Miro-like	protein
DnaB_C	PF03796.10	gi|479327011|ref|YP_007867068.1|	-	0.055	12.3	0.0	0.064	12.1	0.0	1.2	1	0	0	1	1	1	0	DnaB-like	helicase	C	terminal	domain
RNA_helicase	PF00910.17	gi|479327011|ref|YP_007867068.1|	-	0.063	13.4	0.0	0.22	11.7	0.0	1.8	2	0	0	2	2	2	0	RNA	helicase
AAA_11	PF13086.1	gi|479327011|ref|YP_007867068.1|	-	0.092	12.3	0.0	0.11	12.0	0.0	1.4	1	1	0	1	1	1	0	AAA	domain
Sigma54_activat	PF00158.21	gi|479327011|ref|YP_007867068.1|	-	0.11	12.0	0.0	0.86	9.0	0.0	2.0	2	0	0	2	2	2	0	Sigma-54	interaction	domain
Ras	PF00071.17	gi|479327011|ref|YP_007867068.1|	-	0.12	11.7	0.0	0.2	11.0	0.0	1.3	1	0	0	1	1	1	0	Ras	family
KTI12	PF08433.5	gi|479327011|ref|YP_007867068.1|	-	0.13	11.4	0.0	0.25	10.5	0.0	1.4	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
AAA_29	PF13555.1	gi|479327011|ref|YP_007867068.1|	-	0.13	11.7	0.0	0.22	11.0	0.0	1.3	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|479327011|ref|YP_007867068.1|	-	0.31	11.3	1.9	0.54	10.5	1.3	1.5	1	1	0	1	1	1	0	AAA	domain
NAD_synthase	PF02540.12	gi|479327012|ref|YP_007867069.1|	-	3.1e-73	245.6	0.0	3.6e-73	245.4	0.0	1.0	1	0	0	1	1	1	1	NAD	synthase
tRNA_Me_trans	PF03054.11	gi|479327012|ref|YP_007867069.1|	-	2.8e-05	22.8	0.0	0.0013	17.3	0.0	2.3	2	0	0	2	2	2	2	tRNA	methyl	transferase
Sigma70_r4	PF04545.11	gi|479327012|ref|YP_007867069.1|	-	0.02	14.2	0.1	0.055	12.7	0.0	1.8	2	0	0	2	2	2	0	Sigma-70,	region	4
ThiI	PF02568.9	gi|479327012|ref|YP_007867069.1|	-	0.067	12.6	0.1	0.1	12.0	0.0	1.3	1	0	0	1	1	1	0	Thiamine	biosynthesis	protein	(ThiI)
CN_hydrolase	PF00795.17	gi|479327013|ref|YP_007867070.1|	-	3.6e-11	42.7	0.0	4.9e-11	42.3	0.0	1.2	1	0	0	1	1	1	1	Carbon-nitrogen	hydrolase
DUF3929	PF13066.1	gi|479327013|ref|YP_007867070.1|	-	0.91	9.3	3.8	11	5.9	0.0	2.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3929)
HTH_5	PF01022.15	gi|479327015|ref|YP_007867072.1|	-	2.1e-11	43.2	0.0	3.5e-11	42.5	0.0	1.2	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|479327015|ref|YP_007867072.1|	-	1.9e-10	40.3	0.0	2.5e-10	39.9	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|479327015|ref|YP_007867072.1|	-	2.3e-08	33.5	0.1	3.6e-08	33.0	0.0	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|479327015|ref|YP_007867072.1|	-	3e-07	29.7	0.0	5.5e-07	28.8	0.0	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|479327015|ref|YP_007867072.1|	-	6.1e-05	22.5	0.0	9.6e-05	21.9	0.0	1.3	1	0	0	1	1	1	1	HTH	domain
HTH_45	PF14947.1	gi|479327015|ref|YP_007867072.1|	-	6.6e-05	22.6	2.4	0.017	14.9	0.2	2.1	1	1	1	2	2	2	2	Winged	helix-turn-helix
HTH_12	PF08461.5	gi|479327015|ref|YP_007867072.1|	-	0.00071	19.2	0.4	0.0018	17.9	0.2	1.9	1	1	1	2	2	2	1	Ribonuclease	R	winged-helix	domain
ArsR	PF09824.4	gi|479327015|ref|YP_007867072.1|	-	0.00081	18.7	0.2	0.001	18.4	0.1	1.2	1	1	0	1	1	1	1	ArsR	transcriptional	regulator
Phage_rep_org_N	PF09681.5	gi|479327015|ref|YP_007867072.1|	-	0.0012	18.3	0.1	0.0015	18.0	0.0	1.2	1	0	0	1	1	1	1	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
MarR	PF01047.17	gi|479327015|ref|YP_007867072.1|	-	0.0016	18.0	0.0	0.0025	17.4	0.0	1.3	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.2	gi|479327015|ref|YP_007867072.1|	-	0.0022	17.6	0.0	0.0028	17.3	0.0	1.2	1	0	0	1	1	1	1	MarR	family
HTH_IclR	PF09339.5	gi|479327015|ref|YP_007867072.1|	-	0.0078	15.7	0.0	0.013	15.0	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_28	PF13518.1	gi|479327015|ref|YP_007867072.1|	-	0.0082	16.1	0.2	0.043	13.8	0.0	2.1	2	1	0	2	2	2	1	Helix-turn-helix	domain
Penicillinase_R	PF03965.11	gi|479327015|ref|YP_007867072.1|	-	0.0083	16.2	0.2	0.011	15.8	0.1	1.4	1	1	0	1	1	1	1	Penicillinase	repressor
HTH_10	PF04967.7	gi|479327015|ref|YP_007867072.1|	-	0.0086	15.6	0.0	0.017	14.7	0.0	1.4	1	0	0	1	1	1	1	HTH	DNA	binding	domain
LexA_DNA_bind	PF01726.11	gi|479327015|ref|YP_007867072.1|	-	0.013	15.0	0.0	0.018	14.5	0.0	1.3	1	0	0	1	1	1	0	LexA	DNA	binding	domain
Fe_dep_repress	PF01325.14	gi|479327015|ref|YP_007867072.1|	-	0.013	15.4	1.0	0.016	15.1	0.0	1.7	2	0	0	2	2	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
MazG-like	PF12643.2	gi|479327015|ref|YP_007867072.1|	-	0.017	15.0	0.1	0.025	14.5	0.1	1.5	1	1	0	1	1	1	0	MazG-like	family
TFIIE_alpha	PF02002.12	gi|479327015|ref|YP_007867072.1|	-	0.024	14.1	1.2	0.029	13.8	0.8	1.2	1	0	0	1	1	1	0	TFIIE	alpha	subunit
GerE	PF00196.14	gi|479327015|ref|YP_007867072.1|	-	0.028	13.7	0.0	0.047	13.0	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
Orthopox_F6	PF06601.7	gi|479327015|ref|YP_007867072.1|	-	0.037	13.9	0.0	1.7	8.6	0.0	2.3	2	0	0	2	2	2	0	Orthopoxvirus	F6	protein
HTH_34	PF13601.1	gi|479327015|ref|YP_007867072.1|	-	0.045	13.7	0.1	0.069	13.1	0.1	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
DUF2089	PF09862.4	gi|479327015|ref|YP_007867072.1|	-	0.064	13.0	0.6	0.21	11.4	0.2	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2089)
HTH_9	PF08221.6	gi|479327015|ref|YP_007867072.1|	-	0.14	12.0	0.0	0.22	11.4	0.0	1.3	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
DUF340	PF03956.8	gi|479327016|ref|YP_007867073.1|	-	1.3e-42	145.3	18.1	1.3e-42	145.3	12.6	2.1	2	0	0	2	2	2	2	Membrane	protein	of	unknown	function	(DUF340)
Per1	PF04080.8	gi|479327016|ref|YP_007867073.1|	-	2.1	7.6	8.4	0.11	11.8	2.3	1.5	2	0	0	2	2	2	0	Per1-like
TMEM154	PF15102.1	gi|479327017|ref|YP_007867074.1|	-	0.14	11.8	0.5	0.3	10.8	0.4	1.5	1	0	0	1	1	1	0	TMEM154	protein	family
YolD	PF08863.5	gi|479327017|ref|YP_007867074.1|	-	1.7	8.5	5.2	2.2	8.1	0.4	2.5	2	1	0	2	2	2	0	YolD-like	protein
Yip1	PF04893.12	gi|479327017|ref|YP_007867074.1|	-	2.6	7.4	8.2	3	7.3	0.6	2.3	2	0	0	2	2	2	0	Yip1	domain
Methyltransf_31	PF13847.1	gi|479327018|ref|YP_007867075.1|	-	5.5e-14	52.0	0.2	7e-14	51.6	0.1	1.3	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|479327018|ref|YP_007867075.1|	-	3.3e-12	46.9	0.0	6.8e-12	45.9	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|479327018|ref|YP_007867075.1|	-	2.6e-11	43.7	0.0	4.5e-11	43.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|479327018|ref|YP_007867075.1|	-	2e-10	40.6	0.0	3.2e-10	39.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|479327018|ref|YP_007867075.1|	-	5e-10	39.7	0.0	8.4e-10	39.0	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|479327018|ref|YP_007867075.1|	-	2.6e-08	33.8	0.0	3.8e-08	33.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|479327018|ref|YP_007867075.1|	-	5.4e-08	33.2	0.0	9.4e-08	32.4	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
TehB	PF03848.9	gi|479327018|ref|YP_007867075.1|	-	2.6e-07	30.0	0.1	3.8e-07	29.4	0.1	1.2	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
MTS	PF05175.9	gi|479327018|ref|YP_007867075.1|	-	8.1e-07	28.5	0.0	1.4e-06	27.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Ubie_methyltran	PF01209.13	gi|479327018|ref|YP_007867075.1|	-	8.1e-05	21.8	0.0	0.00012	21.2	0.0	1.4	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
NodS	PF05401.6	gi|479327018|ref|YP_007867075.1|	-	0.00012	21.5	0.0	0.00017	21.0	0.0	1.2	1	0	0	1	1	1	1	Nodulation	protein	S	(NodS)
MethyltransfD12	PF02086.10	gi|479327018|ref|YP_007867075.1|	-	0.00012	21.6	1.9	0.00016	21.2	1.3	1.2	1	0	0	1	1	1	1	D12	class	N6	adenine-specific	DNA	methyltransferase
CMAS	PF02353.15	gi|479327018|ref|YP_007867075.1|	-	0.0014	17.7	0.2	0.0072	15.4	0.0	1.9	2	0	0	2	2	2	1	Mycolic	acid	cyclopropane	synthetase
AdoMet_MTase	PF07757.8	gi|479327018|ref|YP_007867075.1|	-	0.0037	17.3	0.1	0.0097	16.0	0.1	1.7	1	1	0	1	1	1	1	Predicted	AdoMet-dependent	methyltransferase
TPMT	PF05724.6	gi|479327018|ref|YP_007867075.1|	-	0.0037	16.7	0.0	0.0054	16.1	0.0	1.3	1	0	0	1	1	1	1	Thiopurine	S-methyltransferase	(TPMT)
MetW	PF07021.7	gi|479327018|ref|YP_007867075.1|	-	0.0039	16.5	0.1	0.0057	16.0	0.0	1.2	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
tRNA_U5-meth_tr	PF05958.6	gi|479327018|ref|YP_007867075.1|	-	0.006	15.3	0.0	0.011	14.4	0.0	1.4	1	0	0	1	1	1	1	tRNA	(Uracil-5-)-methyltransferase
Methyltransf_15	PF09445.5	gi|479327018|ref|YP_007867075.1|	-	0.016	14.7	0.0	0.023	14.2	0.0	1.3	1	0	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
N2227	PF07942.7	gi|479327018|ref|YP_007867075.1|	-	0.016	14.1	1.4	0.047	12.6	0.0	2.2	2	1	0	2	2	2	0	N2227-like	protein
RrnaAD	PF00398.15	gi|479327018|ref|YP_007867075.1|	-	0.017	14.1	0.0	0.037	13.0	0.0	1.6	1	1	1	2	2	2	0	Ribosomal	RNA	adenine	dimethylase
PrmA	PF06325.8	gi|479327018|ref|YP_007867075.1|	-	0.041	13.0	0.0	0.067	12.3	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
DREV	PF05219.7	gi|479327018|ref|YP_007867075.1|	-	0.049	12.5	0.1	0.067	12.0	0.1	1.2	1	0	0	1	1	1	0	DREV	methyltransferase
UPF0020	PF01170.13	gi|479327018|ref|YP_007867075.1|	-	0.13	11.8	0.0	0.21	11.1	0.0	1.3	1	0	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
FmrO	PF07091.6	gi|479327018|ref|YP_007867075.1|	-	0.13	11.1	0.0	0.17	10.8	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	RNA	methyltransferase	(FmrO)
Semialdhyde_dh	PF01118.19	gi|479327019|ref|YP_007867076.1|	-	2.9e-31	108.3	0.0	6.6e-31	107.1	0.0	1.6	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Semialdhyde_dhC	PF02774.13	gi|479327019|ref|YP_007867076.1|	-	4.5e-21	75.5	0.0	6.5e-21	75.0	0.0	1.2	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
DUF3584	PF12128.3	gi|479327021|ref|YP_007867078.1|	-	0.12	9.7	0.1	0.14	9.4	0.1	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
Pro-kuma_activ	PF09286.6	gi|479327022|ref|YP_007867079.1|	-	2.1e-10	40.8	0.0	3.9e-10	39.9	0.0	1.4	1	0	0	1	1	1	1	Pro-kumamolisin,	activation	domain
Peptidase_S8	PF00082.17	gi|479327022|ref|YP_007867079.1|	-	3.9e-07	29.5	0.1	7.7e-07	28.5	0.0	1.5	1	0	0	1	1	1	1	Subtilase	family
Iso_dh	PF00180.15	gi|479327023|ref|YP_007867080.1|	-	1.4e-103	346.4	0.1	1.7e-103	346.2	0.1	1.0	1	0	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase