#                                                                           --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
# target name        accession  query name                       accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target
#------------------- ----------             -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------
Cdc6_C	PF09079.6	gi|568162878|ref|YP_008946166.1|	-	5e-16	58.1	0.0	1.1e-15	57.1	0.0	1.6	1	0	0	1	1	1	1	CDC6,	C	terminal
AAA_22	PF13401.1	gi|568162878|ref|YP_008946166.1|	-	3e-11	43.5	0.1	1.1e-09	38.4	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
AAA	PF00004.24	gi|568162878|ref|YP_008946166.1|	-	1.1e-05	25.6	0.0	3.7e-05	23.9	0.0	1.9	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
NB-ARC	PF00931.17	gi|568162878|ref|YP_008946166.1|	-	0.00037	19.4	0.0	0.0011	17.8	0.0	1.6	1	1	1	2	2	2	1	NB-ARC	domain
DUF2075	PF09848.4	gi|568162878|ref|YP_008946166.1|	-	0.0018	17.3	0.0	0.0028	16.7	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
Sigma54_activat	PF00158.21	gi|568162878|ref|YP_008946166.1|	-	0.011	15.1	0.0	0.036	13.5	0.0	1.9	2	0	0	2	2	2	0	Sigma-54	interaction	domain
AAA_16	PF13191.1	gi|568162878|ref|YP_008946166.1|	-	0.044	13.7	0.0	0.095	12.6	0.0	1.6	1	0	0	1	1	1	0	AAA	ATPase	domain
PhoH	PF02562.11	gi|568162878|ref|YP_008946166.1|	-	0.048	12.8	0.0	0.11	11.6	0.0	1.6	1	0	0	1	1	1	0	PhoH-like	protein
DNA_pol3_delta2	PF13177.1	gi|568162878|ref|YP_008946166.1|	-	0.054	13.1	0.3	4.3	6.9	0.0	2.3	2	0	0	2	2	2	0	DNA	polymerase	III,	delta	subunit
IstB_IS21	PF01695.12	gi|568162878|ref|YP_008946166.1|	-	0.073	12.4	0.0	2.3	7.5	0.0	2.2	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
KNOX1	PF03790.8	gi|568162878|ref|YP_008946166.1|	-	0.086	12.1	0.0	0.35	10.2	0.0	2.0	1	0	0	1	1	1	0	KNOX1	domain
NPV_P10	PF05531.7	gi|568162879|ref|YP_008946167.1|	-	0.021	15.0	1.0	0.32	11.2	0.1	2.1	2	0	0	2	2	2	0	Nucleopolyhedrovirus	P10	protein
MerR-DNA-bind	PF09278.6	gi|568162879|ref|YP_008946167.1|	-	0.03	14.7	0.7	0.2	12.0	0.1	2.1	2	0	0	2	2	2	0	MerR,	DNA	binding
Plasmodium_Vir	PF05795.6	gi|568162879|ref|YP_008946167.1|	-	0.036	13.2	3.6	0.057	12.6	2.3	1.5	1	1	0	1	1	1	0	Plasmodium	vivax	Vir	protein
E2R135	PF11570.3	gi|568162879|ref|YP_008946167.1|	-	0.064	13.3	0.0	0.087	12.9	0.0	1.2	1	0	0	1	1	1	0	Coiled-coil	receptor-binding	R-domain	of	colicin	E2
Lipoprotein_7	PF01540.11	gi|568162879|ref|YP_008946167.1|	-	0.33	9.9	5.2	14	4.5	3.6	2.0	1	1	0	1	1	1	0	Adhesin	lipoprotein
DUF1319	PF07028.6	gi|568162879|ref|YP_008946167.1|	-	0.71	10.0	6.0	0.67	10.1	1.2	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1319)
Prefoldin_2	PF01920.15	gi|568162879|ref|YP_008946167.1|	-	0.98	9.2	4.1	1.6	8.4	0.1	2.3	2	1	0	2	2	2	0	Prefoldin	subunit
TM_helix	PF05552.7	gi|568162880|ref|YP_008946168.1|	-	4.7e-14	51.7	11.9	1.3e-10	40.8	1.6	4.1	5	0	0	5	5	5	2	Conserved	TM	helix
HTH_5	PF01022.15	gi|568162883|ref|YP_008946171.1|	-	1.9e-13	49.8	0.0	2.9e-13	49.2	0.0	1.2	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|568162883|ref|YP_008946171.1|	-	4.8e-11	42.2	0.0	6.5e-11	41.8	0.0	1.1	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|568162883|ref|YP_008946171.1|	-	3.2e-09	36.3	0.6	4.4e-09	35.9	0.4	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|568162883|ref|YP_008946171.1|	-	7.2e-07	28.4	0.0	1.5e-06	27.5	0.0	1.5	1	1	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|568162883|ref|YP_008946171.1|	-	3e-05	23.5	0.1	4.3e-05	23.0	0.0	1.2	1	0	0	1	1	1	1	HTH	domain
HTH_45	PF14947.1	gi|568162883|ref|YP_008946171.1|	-	9.2e-05	22.1	0.5	0.00011	21.8	0.3	1.1	1	0	0	1	1	1	1	Winged	helix-turn-helix
Penicillinase_R	PF03965.11	gi|568162883|ref|YP_008946171.1|	-	0.00028	20.9	0.3	0.00035	20.6	0.2	1.3	1	1	0	1	1	1	1	Penicillinase	repressor
HTH_IclR	PF09339.5	gi|568162883|ref|YP_008946171.1|	-	0.00047	19.6	0.0	0.00067	19.1	0.0	1.2	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_12	PF08461.5	gi|568162883|ref|YP_008946171.1|	-	0.00077	19.1	0.1	0.001	18.7	0.1	1.4	1	0	0	1	1	1	1	Ribonuclease	R	winged-helix	domain
MarR_2	PF12802.2	gi|568162883|ref|YP_008946171.1|	-	0.0022	17.6	0.0	0.0029	17.2	0.0	1.1	1	0	0	1	1	1	1	MarR	family
DUF4423	PF14394.1	gi|568162883|ref|YP_008946171.1|	-	0.0027	17.2	0.1	0.003	17.1	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
Phage_rep_org_N	PF09681.5	gi|568162883|ref|YP_008946171.1|	-	0.0032	17.0	0.0	0.0032	17.0	0.0	1.2	1	0	0	1	1	1	1	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
HTH_34	PF13601.1	gi|568162883|ref|YP_008946171.1|	-	0.004	17.1	0.2	0.0049	16.8	0.1	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
DUF2513	PF10711.4	gi|568162883|ref|YP_008946171.1|	-	0.0044	17.0	0.0	0.0053	16.8	0.0	1.1	1	0	0	1	1	1	1	Hypothetical	protein	(DUF2513)
TFIIE_alpha	PF02002.12	gi|568162883|ref|YP_008946171.1|	-	0.0059	16.0	0.1	0.0063	15.9	0.1	1.1	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HTH_29	PF13551.1	gi|568162883|ref|YP_008946171.1|	-	0.021	14.9	0.0	0.025	14.7	0.0	1.1	1	0	0	1	1	1	0	Winged	helix-turn	helix
Sigma70_r4_2	PF08281.7	gi|568162883|ref|YP_008946171.1|	-	0.021	14.2	0.1	0.11	11.9	0.1	2.0	1	1	0	1	1	1	0	Sigma-70,	region	4
HTH_28	PF13518.1	gi|568162883|ref|YP_008946171.1|	-	0.021	14.8	0.0	0.028	14.4	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
DUF2089	PF09862.4	gi|568162883|ref|YP_008946171.1|	-	0.023	14.4	0.2	0.042	13.6	0.1	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2089)
Fe_dep_repress	PF01325.14	gi|568162883|ref|YP_008946171.1|	-	0.033	14.1	0.1	0.043	13.7	0.1	1.2	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
PadR	PF03551.9	gi|568162883|ref|YP_008946171.1|	-	0.035	13.8	0.2	0.078	12.7	0.2	1.6	1	1	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
HTH_27	PF13463.1	gi|568162883|ref|YP_008946171.1|	-	0.036	14.3	0.0	0.046	14.0	0.0	1.1	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_10	PF04967.7	gi|568162883|ref|YP_008946171.1|	-	0.044	13.3	0.0	0.075	12.6	0.0	1.4	1	1	0	1	1	1	0	HTH	DNA	binding	domain
HTH_23	PF13384.1	gi|568162883|ref|YP_008946171.1|	-	0.047	13.3	0.0	0.064	12.9	0.0	1.2	1	0	0	1	1	1	0	Homeodomain-like	domain
MarR	PF01047.17	gi|568162883|ref|YP_008946171.1|	-	0.047	13.3	0.0	0.06	13.0	0.0	1.2	1	0	0	1	1	1	0	MarR	family
Rrf2	PF02082.15	gi|568162883|ref|YP_008946171.1|	-	0.064	13.3	0.0	0.084	12.9	0.0	1.2	1	0	0	1	1	1	0	Transcriptional	regulator
FaeA	PF04703.7	gi|568162883|ref|YP_008946171.1|	-	0.11	12.6	0.1	0.14	12.3	0.1	1.2	1	0	0	1	1	1	0	FaeA-like	protein
LexA_DNA_bind	PF01726.11	gi|568162883|ref|YP_008946171.1|	-	0.14	11.6	0.0	0.21	11.1	0.0	1.3	1	0	0	1	1	1	0	LexA	DNA	binding	domain
DUF742	PF05331.6	gi|568162883|ref|YP_008946171.1|	-	0.15	11.6	0.0	0.17	11.5	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF742)
CN_hydrolase	PF00795.17	gi|568162884|ref|YP_008946173.1|	-	3.9e-10	39.3	0.0	5.3e-10	38.9	0.0	1.2	1	0	0	1	1	1	1	Carbon-nitrogen	hydrolase
NAD_synthase	PF02540.12	gi|568162885|ref|YP_008946174.1|	-	6.8e-75	251.0	0.0	7.8e-75	250.8	0.0	1.0	1	0	0	1	1	1	1	NAD	synthase
tRNA_Me_trans	PF03054.11	gi|568162885|ref|YP_008946174.1|	-	5.8e-05	21.8	0.0	0.0022	16.6	0.0	2.1	2	0	0	2	2	2	1	tRNA	methyl	transferase
ThiI	PF02568.9	gi|568162885|ref|YP_008946174.1|	-	0.0018	17.7	0.0	0.0026	17.2	0.0	1.2	1	0	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
Asn_synthase	PF00733.16	gi|568162885|ref|YP_008946174.1|	-	0.0033	16.9	0.0	0.0033	16.9	0.0	1.2	1	0	0	1	1	1	1	Asparagine	synthase
Sigma70_r4	PF04545.11	gi|568162885|ref|YP_008946174.1|	-	0.012	14.9	0.1	0.027	13.7	0.1	1.5	1	0	0	1	1	1	0	Sigma-70,	region	4
QueC	PF06508.8	gi|568162885|ref|YP_008946174.1|	-	0.035	13.3	0.0	0.11	11.7	0.0	1.9	2	0	0	2	2	2	0	Queuosine	biosynthesis	protein	QueC
NTPase_1	PF03266.10	gi|568162887|ref|YP_008946176.1|	-	1.2e-49	168.2	0.0	1.4e-49	168.0	0.0	1.0	1	0	0	1	1	1	1	NTPase
Pox_A32	PF04665.7	gi|568162887|ref|YP_008946176.1|	-	4.8e-06	26.0	0.1	0.0037	16.5	0.0	2.1	2	0	0	2	2	2	2	Poxvirus	A32	protein
MobB	PF03205.9	gi|568162887|ref|YP_008946176.1|	-	2.7e-05	23.8	0.1	0.00038	20.1	0.0	2.2	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA	PF00004.24	gi|568162887|ref|YP_008946176.1|	-	3.6e-05	23.9	0.0	5.9e-05	23.2	0.0	1.4	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.1	gi|568162887|ref|YP_008946176.1|	-	0.0002	21.3	0.0	0.00039	20.4	0.0	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
CbiA	PF01656.18	gi|568162887|ref|YP_008946176.1|	-	0.00023	20.6	0.0	0.0003	20.2	0.0	1.2	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_22	PF13401.1	gi|568162887|ref|YP_008946176.1|	-	0.00027	21.0	0.1	0.00078	19.5	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
NACHT	PF05729.7	gi|568162887|ref|YP_008946176.1|	-	0.00074	19.2	0.0	0.0026	17.4	0.0	1.7	2	0	0	2	2	2	1	NACHT	domain
AAA_24	PF13479.1	gi|568162887|ref|YP_008946176.1|	-	0.0015	18.1	0.1	0.0048	16.4	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
AAA_18	PF13238.1	gi|568162887|ref|YP_008946176.1|	-	0.0015	18.8	0.2	0.0021	18.3	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|568162887|ref|YP_008946176.1|	-	0.0032	17.3	0.8	0.065	13.1	0.5	2.3	1	1	0	1	1	1	1	AAA	domain
DUF2608	PF11019.3	gi|568162887|ref|YP_008946176.1|	-	0.0036	16.3	0.0	0.005	15.8	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2608)
ABC_tran	PF00005.22	gi|568162887|ref|YP_008946176.1|	-	0.0054	17.0	0.3	0.0098	16.1	0.0	1.6	2	0	0	2	2	1	1	ABC	transporter
Arch_ATPase	PF01637.13	gi|568162887|ref|YP_008946176.1|	-	0.0055	16.4	0.3	0.0084	15.8	0.2	1.5	1	1	0	1	1	1	1	Archaeal	ATPase
AAA_17	PF13207.1	gi|568162887|ref|YP_008946176.1|	-	0.0064	17.2	0.7	0.011	16.5	0.5	1.7	1	1	0	1	1	1	1	AAA	domain
DUF2478	PF10649.4	gi|568162887|ref|YP_008946176.1|	-	0.0065	15.8	0.0	0.038	13.3	0.0	1.8	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF2478)
NB-ARC	PF00931.17	gi|568162887|ref|YP_008946176.1|	-	0.0079	15.0	0.0	0.013	14.3	0.0	1.3	1	0	0	1	1	1	1	NB-ARC	domain
AAA_28	PF13521.1	gi|568162887|ref|YP_008946176.1|	-	0.0093	15.9	0.0	0.015	15.2	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
cobW	PF02492.14	gi|568162887|ref|YP_008946176.1|	-	0.0096	15.3	0.1	0.025	14.0	0.0	1.7	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
DAP3	PF10236.4	gi|568162887|ref|YP_008946176.1|	-	0.015	14.2	0.0	0.071	12.0	0.0	1.8	2	0	0	2	2	2	0	Mitochondrial	ribosomal	death-associated	protein	3
RNA_helicase	PF00910.17	gi|568162887|ref|YP_008946176.1|	-	0.016	15.4	0.1	0.057	13.5	0.0	1.9	2	0	0	2	2	2	0	RNA	helicase
Thymidylate_kin	PF02223.12	gi|568162887|ref|YP_008946176.1|	-	0.022	14.1	0.0	0.075	12.3	0.0	1.8	2	0	0	2	2	2	0	Thymidylate	kinase
ArgK	PF03308.11	gi|568162887|ref|YP_008946176.1|	-	0.029	13.1	0.0	0.047	12.4	0.0	1.3	1	0	0	1	1	1	0	ArgK	protein
KAP_NTPase	PF07693.9	gi|568162887|ref|YP_008946176.1|	-	0.037	13.0	0.0	0.037	13.0	0.0	1.1	1	0	0	1	1	1	0	KAP	family	P-loop	domain
APS_kinase	PF01583.15	gi|568162887|ref|YP_008946176.1|	-	0.047	13.3	0.0	0.071	12.7	0.0	1.3	1	0	0	1	1	1	0	Adenylylsulphate	kinase
AAA_19	PF13245.1	gi|568162887|ref|YP_008946176.1|	-	0.051	13.3	0.0	0.099	12.4	0.0	1.4	1	0	0	1	1	1	0	Part	of	AAA	domain
T2SE	PF00437.15	gi|568162887|ref|YP_008946176.1|	-	0.052	12.4	0.1	0.39	9.5	0.0	2.1	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
Miro	PF08477.8	gi|568162887|ref|YP_008946176.1|	-	0.061	13.8	0.0	0.1	13.0	0.0	1.4	1	0	0	1	1	1	0	Miro-like	protein
AAA_30	PF13604.1	gi|568162887|ref|YP_008946176.1|	-	0.069	12.7	0.0	0.091	12.3	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
AAA_25	PF13481.1	gi|568162887|ref|YP_008946176.1|	-	0.089	12.1	0.0	0.21	10.9	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
AAA_33	PF13671.1	gi|568162887|ref|YP_008946176.1|	-	0.094	12.5	0.0	1.9	8.3	0.0	2.2	2	1	0	2	2	2	0	AAA	domain
MMR_HSR1	PF01926.18	gi|568162887|ref|YP_008946176.1|	-	0.13	12.2	0.6	0.21	11.5	0.4	1.7	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
ATP_bind_1	PF03029.12	gi|568162887|ref|YP_008946176.1|	-	0.14	11.6	0.0	0.62	9.5	0.0	1.8	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
Chlor_dismutase	PF06778.7	gi|568162888|ref|YP_008946177.1|	-	6.8e-53	179.2	0.4	1.4e-52	178.2	0.0	1.6	1	1	1	2	2	2	1	Chlorite	dismutase
Aldedh	PF00171.17	gi|568162888|ref|YP_008946177.1|	-	0.15	10.3	0.3	1.5	7.0	0.2	1.9	2	0	0	2	2	2	0	Aldehyde	dehydrogenase	family
NUDIX	PF00293.23	gi|568162889|ref|YP_008946178.1|	-	1.8e-18	66.4	0.0	2.2e-18	66.1	0.0	1.1	1	0	0	1	1	1	1	NUDIX	domain
SNARE_assoc	PF09335.6	gi|568162890|ref|YP_008946179.1|	-	3.5e-06	27.2	3.8	3.5e-06	27.2	2.6	2.2	1	1	1	2	2	2	1	SNARE	associated	Golgi	protein
AP_endonuc_2	PF01261.19	gi|568162891|ref|YP_008946180.1|	-	7.7e-24	84.1	0.0	9.8e-24	83.8	0.0	1.1	1	0	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
UvdE	PF03851.9	gi|568162891|ref|YP_008946180.1|	-	0.00022	20.3	0.0	0.00034	19.7	0.0	1.3	1	0	0	1	1	1	1	UV-endonuclease	UvdE
HMGL-like	PF00682.14	gi|568162891|ref|YP_008946180.1|	-	0.00033	20.3	0.1	0.00058	19.6	0.0	1.3	1	1	0	1	1	1	1	HMGL-like
DeoC	PF01791.4	gi|568162891|ref|YP_008946180.1|	-	0.0042	16.4	0.3	0.0061	15.8	0.2	1.4	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
DUF3973	PF13119.1	gi|568162891|ref|YP_008946180.1|	-	0.049	13.5	0.5	0.12	12.2	0.3	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3973)
Hydrolase_3	PF08282.7	gi|568162892|ref|YP_008946181.1|	-	4e-26	92.1	0.1	4.2e-17	62.5	0.0	2.0	1	1	1	2	2	2	2	haloacid	dehalogenase-like	hydrolase
S6PP	PF05116.8	gi|568162892|ref|YP_008946181.1|	-	1.8e-09	37.2	0.0	1.8e-06	27.4	0.0	2.2	2	0	0	2	2	2	2	Sucrose-6F-phosphate	phosphohydrolase
Trehalose_PPase	PF02358.11	gi|568162892|ref|YP_008946181.1|	-	1.5e-06	27.3	0.0	0.015	14.1	0.0	2.1	2	0	0	2	2	2	2	Trehalose-phosphatase
HAD	PF12710.2	gi|568162892|ref|YP_008946181.1|	-	0.0017	18.5	0.1	0.0052	16.9	0.1	1.9	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
DUF934	PF06073.7	gi|568162892|ref|YP_008946181.1|	-	0.086	12.5	0.0	0.18	11.5	0.0	1.5	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF934)
Hydrolase	PF00702.21	gi|568162892|ref|YP_008946181.1|	-	0.097	13.0	0.0	0.15	12.4	0.0	1.5	1	0	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
Methyltransf_31	PF13847.1	gi|568162893|ref|YP_008946182.1|	-	2.4e-05	23.9	0.1	3.1e-05	23.6	0.0	1.2	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|568162893|ref|YP_008946182.1|	-	0.00023	21.1	0.0	0.00025	21.0	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|568162893|ref|YP_008946182.1|	-	0.00076	19.1	0.0	0.00089	18.8	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
MTS	PF05175.9	gi|568162893|ref|YP_008946182.1|	-	0.0054	16.1	0.0	0.0077	15.6	0.0	1.3	1	1	0	1	1	1	1	Methyltransferase	small	domain
HAD_2	PF13419.1	gi|568162894|ref|YP_008946183.1|	-	2.3e-17	63.7	0.0	2.8e-17	63.4	0.0	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|568162894|ref|YP_008946183.1|	-	1.7e-08	34.0	0.0	6.3e-08	32.2	0.0	1.8	2	0	0	2	2	2	1	HAD-hyrolase-like
Hydrolase	PF00702.21	gi|568162894|ref|YP_008946183.1|	-	1.7e-06	28.6	0.0	9.7e-06	26.1	0.0	1.9	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_6	PF13344.1	gi|568162894|ref|YP_008946183.1|	-	0.06	13.2	0.0	0.21	11.4	0.0	1.9	2	0	0	2	2	2	0	Haloacid	dehalogenase-like	hydrolase
HypA	PF01155.14	gi|568162895|ref|YP_008946184.1|	-	0.0011	18.6	1.0	0.0017	18.0	0.6	1.3	1	1	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
DUF1451	PF07295.6	gi|568162895|ref|YP_008946184.1|	-	0.0081	15.9	1.4	0.017	14.9	0.9	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1451)
Sigma70_r4	PF04545.11	gi|568162895|ref|YP_008946184.1|	-	0.0091	15.2	0.1	0.014	14.7	0.0	1.2	1	0	0	1	1	1	1	Sigma-70,	region	4
IBR	PF01485.16	gi|568162895|ref|YP_008946184.1|	-	0.013	15.3	1.0	0.017	14.9	0.7	1.2	1	0	0	1	1	1	0	IBR	domain
z-alpha	PF02295.12	gi|568162895|ref|YP_008946184.1|	-	0.015	15.0	0.9	0.029	14.1	0.5	1.6	1	1	0	1	1	1	0	Adenosine	deaminase	z-alpha	domain
DZR	PF12773.2	gi|568162895|ref|YP_008946184.1|	-	0.016	15.0	1.0	0.027	14.2	0.7	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
UPF0547	PF10571.4	gi|568162895|ref|YP_008946184.1|	-	0.019	14.6	5.8	0.11	12.1	0.1	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
TF_Zn_Ribbon	PF08271.7	gi|568162895|ref|YP_008946184.1|	-	0.025	13.8	4.6	0.6	9.4	0.7	2.3	2	0	0	2	2	2	0	TFIIB	zinc-binding
RNA_POL_M_15KD	PF02150.11	gi|568162895|ref|YP_008946184.1|	-	0.032	13.9	2.0	0.21	11.3	0.0	2.3	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
PhnA_Zn_Ribbon	PF08274.7	gi|568162895|ref|YP_008946184.1|	-	0.044	13.5	6.1	0.4	10.5	1.4	2.2	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
zf-C2HC5	PF06221.8	gi|568162895|ref|YP_008946184.1|	-	0.062	13.0	0.5	0.098	12.4	0.4	1.3	1	0	0	1	1	1	0	Putative	zinc	finger	motif,	C2HC5-type
Zn-ribbon_8	PF09723.5	gi|568162895|ref|YP_008946184.1|	-	0.064	13.2	4.6	0.21	11.5	3.2	1.9	1	1	0	1	1	1	0	Zinc	ribbon	domain
FUR	PF01475.14	gi|568162895|ref|YP_008946184.1|	-	0.069	13.0	2.3	2.3	8.1	0.2	2.1	2	0	0	2	2	2	0	Ferric	uptake	regulator	family
zf-ribbon_3	PF13248.1	gi|568162895|ref|YP_008946184.1|	-	0.073	12.3	3.8	1.9	7.8	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
NRDD	PF13597.1	gi|568162895|ref|YP_008946184.1|	-	0.077	11.0	0.1	0.079	11.0	0.1	1.1	1	0	0	1	1	1	0	Anaerobic	ribonucleoside-triphosphate	reductase
HTH_5	PF01022.15	gi|568162895|ref|YP_008946184.1|	-	0.089	12.4	0.1	0.17	11.5	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
HTH_11	PF08279.7	gi|568162895|ref|YP_008946184.1|	-	0.11	12.1	0.2	0.19	11.4	0.1	1.4	1	0	0	1	1	1	0	HTH	domain
A2L_zn_ribbon	PF08792.5	gi|568162895|ref|YP_008946184.1|	-	0.14	11.6	1.6	6.4	6.3	0.2	2.3	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
zinc_ribbon_2	PF13240.1	gi|568162895|ref|YP_008946184.1|	-	0.22	11.0	4.2	6.4	6.3	0.7	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
TFIIS_C	PF01096.13	gi|568162895|ref|YP_008946184.1|	-	0.39	10.4	3.4	9.4	5.9	0.4	2.3	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
OrfB_Zn_ribbon	PF07282.6	gi|568162895|ref|YP_008946184.1|	-	0.47	10.1	2.3	0.95	9.1	1.6	1.5	1	1	0	1	1	1	0	Putative	transposase	DNA-binding	domain
ADK_lid	PF05191.9	gi|568162895|ref|YP_008946184.1|	-	1.1	8.9	3.8	2.6	7.7	2.6	1.7	1	0	0	1	1	1	0	Adenylate	kinase,	active	site	lid
Rubredoxin	PF00301.15	gi|568162895|ref|YP_008946184.1|	-	1.1	9.1	4.6	13	5.7	3.2	2.1	1	1	0	1	1	1	0	Rubredoxin
zinc_ribbon_5	PF13719.1	gi|568162895|ref|YP_008946184.1|	-	1.7	8.2	4.9	36	4.0	3.4	2.3	1	1	0	1	1	1	0	zinc-ribbon	domain
zf-H2C2_2	PF13465.1	gi|568162895|ref|YP_008946184.1|	-	1.8	9.0	5.9	6.7	7.1	0.1	2.4	2	0	0	2	2	2	0	Zinc-finger	double	domain
eIF-5_eIF-2B	PF01873.12	gi|568162895|ref|YP_008946184.1|	-	1.8	8.2	4.7	0.7	9.5	0.3	2.1	1	1	1	3	3	3	0	Domain	found	in	IF2B/IF5
Nop10p	PF04135.7	gi|568162895|ref|YP_008946184.1|	-	1.8	8.3	4.3	11	5.8	2.5	2.2	1	1	1	2	2	2	0	Nucleolar	RNA-binding	protein,	Nop10p	family
zinc_ribbon_4	PF13717.1	gi|568162895|ref|YP_008946184.1|	-	2.3	8.0	5.1	48	3.7	3.5	2.3	1	1	0	1	1	1	0	zinc-ribbon	domain
DUF3797	PF12677.2	gi|568162895|ref|YP_008946184.1|	-	8.4	6.1	7.3	5.4	6.7	0.4	2.5	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3797)
DBI_PRT	PF02277.12	gi|568162896|ref|YP_008946185.1|	-	1.3e-32	113.2	0.0	1.5e-32	112.9	0.0	1.1	1	0	0	1	1	1	1	Phosphoribosyltransferase
Cnl2_NKP2	PF09447.5	gi|568162897|ref|YP_008946186.1|	-	0.011	15.4	0.0	0.023	14.3	0.0	1.5	1	0	0	1	1	1	0	Cnl2/NKP2	family	protein
NadA	PF02445.11	gi|568162898|ref|YP_008946187.1|	-	9.3e-103	343.0	0.0	1.1e-102	342.8	0.0	1.0	1	0	0	1	1	1	1	Quinolinate	synthetase	A	protein
Aminotran_5	PF00266.14	gi|568162899|ref|YP_008946188.1|	-	1.8e-45	155.3	0.0	2.4e-45	154.8	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.15	gi|568162899|ref|YP_008946188.1|	-	0.0036	15.6	0.1	0.0059	14.9	0.1	1.3	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Aminotran_1_2	PF00155.16	gi|568162899|ref|YP_008946188.1|	-	0.039	12.9	0.3	1.6	7.6	0.1	2.1	2	0	0	2	2	2	0	Aminotransferase	class	I	and	II
DegT_DnrJ_EryC1	PF01041.12	gi|568162899|ref|YP_008946188.1|	-	0.11	11.4	0.2	0.23	10.4	0.0	1.5	2	0	0	2	2	2	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
AMP-binding	PF00501.23	gi|568162900|ref|YP_008946189.1|	-	2.9e-68	230.1	0.0	3.6e-68	229.8	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|568162900|ref|YP_008946189.1|	-	2.5e-17	63.5	0.1	4.7e-17	62.6	0.0	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
B12D	PF06522.6	gi|568162900|ref|YP_008946189.1|	-	0.048	13.3	0.6	0.11	12.1	0.4	1.6	1	0	0	1	1	1	0	NADH-ubiquinone	reductase	complex	1	MLRQ	subunit
UPF0547	PF10571.4	gi|568162901|ref|YP_008946190.1|	-	0.0039	16.8	2.9	0.0074	15.9	2.0	1.4	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
NOB1_Zn_bind	PF08772.6	gi|568162901|ref|YP_008946190.1|	-	0.0057	16.4	3.5	0.013	15.2	2.4	1.6	1	0	0	1	1	1	1	Nin	one	binding	(NOB1)	Zn-ribbon	like
DZR	PF12773.2	gi|568162901|ref|YP_008946190.1|	-	0.046	13.5	0.4	0.063	13.0	0.3	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
zf-UBR	PF02207.15	gi|568162901|ref|YP_008946190.1|	-	0.06	13.0	1.3	0.092	12.4	0.9	1.2	1	0	0	1	1	1	0	Putative	zinc	finger	in	N-recognin	(UBR	box)
Ribosomal_L44	PF00935.14	gi|568162901|ref|YP_008946190.1|	-	0.38	10.7	5.0	0.87	9.6	3.3	1.7	1	1	1	2	2	2	0	Ribosomal	protein	L44
zinc_ribbon_2	PF13240.1	gi|568162901|ref|YP_008946190.1|	-	0.44	10.0	3.8	0.68	9.5	2.6	1.3	1	0	0	1	1	1	0	zinc-ribbon	domain
Zn-ribbon_8	PF09723.5	gi|568162901|ref|YP_008946190.1|	-	1.1	9.2	4.7	6.9	6.7	3.3	2.1	1	1	0	1	1	1	0	Zinc	ribbon	domain
Desulfoferrod_N	PF06397.7	gi|568162901|ref|YP_008946190.1|	-	6.3	6.2	10.2	2.7	7.4	1.8	2.3	1	1	1	2	2	2	0	Desulfoferrodoxin,	N-terminal	domain
NAD_kinase	PF01513.16	gi|568162902|ref|YP_008946191.1|	-	8e-23	80.6	0.1	1.1e-22	80.2	0.1	1.2	1	0	0	1	1	1	1	ATP-NAD	kinase
DAGK_cat	PF00781.19	gi|568162902|ref|YP_008946191.1|	-	0.0082	15.5	0.1	0.02	14.3	0.1	1.7	1	0	0	1	1	1	1	Diacylglycerol	kinase	catalytic	domain
SLT_beta	PF02258.11	gi|568162902|ref|YP_008946191.1|	-	0.11	12.3	0.1	0.23	11.3	0.0	1.5	1	0	0	1	1	1	0	Shiga-like	toxin	beta	subunit
Pyr_redox_2	PF07992.9	gi|568162903|ref|YP_008946193.1|	-	1e-19	71.2	0.0	1.8e-19	70.4	0.0	1.6	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|568162903|ref|YP_008946193.1|	-	7.2e-17	62.1	0.3	6.9e-10	39.3	0.0	2.8	2	1	1	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|568162903|ref|YP_008946193.1|	-	7.8e-14	51.8	0.2	5.6e-10	39.4	0.0	2.6	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
K_oxygenase	PF13434.1	gi|568162903|ref|YP_008946193.1|	-	2.2e-11	43.2	0.1	1.3e-08	34.1	0.0	3.0	2	1	1	3	3	3	2	L-lysine	6-monooxygenase	(NADPH-requiring)
HI0933_like	PF03486.9	gi|568162903|ref|YP_008946193.1|	-	4.6e-07	28.6	0.2	0.00031	19.3	0.0	3.4	4	0	0	4	4	4	1	HI0933-like	protein
NAD_binding_8	PF13450.1	gi|568162903|ref|YP_008946193.1|	-	6e-07	29.4	0.2	2.6e-05	24.1	0.1	2.5	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.12	gi|568162903|ref|YP_008946193.1|	-	1.2e-05	24.5	2.2	0.0056	15.7	0.0	2.9	3	0	0	3	3	3	2	Thi4	family
NAD_binding_7	PF13241.1	gi|568162903|ref|YP_008946193.1|	-	5.5e-05	23.3	0.1	0.0019	18.4	0.1	2.4	2	0	0	2	2	2	1	Putative	NAD(P)-binding
FMO-like	PF00743.14	gi|568162903|ref|YP_008946193.1|	-	0.00034	18.9	0.2	0.0015	16.8	0.0	1.9	1	1	1	2	2	2	1	Flavin-binding	monooxygenase-like
FAD_oxidored	PF12831.2	gi|568162903|ref|YP_008946193.1|	-	0.0016	17.6	0.1	0.015	14.3	0.0	2.1	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
DAO	PF01266.19	gi|568162903|ref|YP_008946193.1|	-	0.0021	17.0	2.1	0.027	13.3	0.1	3.0	2	2	1	3	3	3	1	FAD	dependent	oxidoreductase
NAD_binding_9	PF13454.1	gi|568162903|ref|YP_008946193.1|	-	0.023	14.4	1.8	6.7	6.4	0.1	3.3	3	1	0	3	3	3	0	FAD-NAD(P)-binding
FAD_binding_3	PF01494.14	gi|568162903|ref|YP_008946193.1|	-	0.024	13.6	0.4	6.8	5.6	0.0	3.0	2	1	1	3	3	3	0	FAD	binding	domain
FAD_binding_2	PF00890.19	gi|568162903|ref|YP_008946193.1|	-	0.041	12.7	3.5	0.38	9.5	0.0	2.9	2	1	0	2	2	2	0	FAD	binding	domain
Spermine_synth	PF01564.12	gi|568162903|ref|YP_008946193.1|	-	0.049	12.5	0.2	0.22	10.4	0.1	1.9	2	0	0	2	2	2	0	Spermine/spermidine	synthase
Met_10	PF02475.11	gi|568162904|ref|YP_008946194.1|	-	9e-34	116.8	0.6	1.3e-33	116.2	0.4	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
MTS	PF05175.9	gi|568162904|ref|YP_008946194.1|	-	2.4e-06	27.0	0.0	3.6e-05	23.2	0.0	2.1	2	0	0	2	2	2	1	Methyltransferase	small	domain
Methyltransf_26	PF13659.1	gi|568162904|ref|YP_008946194.1|	-	2.6e-05	24.2	0.0	5.7e-05	23.1	0.0	1.5	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|568162904|ref|YP_008946194.1|	-	7.7e-05	23.1	0.0	0.00019	21.8	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|568162904|ref|YP_008946194.1|	-	0.00053	19.1	0.0	0.00072	18.7	0.0	1.3	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_31	PF13847.1	gi|568162904|ref|YP_008946194.1|	-	0.00078	19.0	0.7	0.0077	15.8	0.2	2.1	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|568162904|ref|YP_008946194.1|	-	0.0043	17.6	0.0	0.0068	16.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|568162904|ref|YP_008946194.1|	-	0.0084	15.5	0.0	0.032	13.6	0.0	1.9	2	0	0	2	2	2	1	Conserved	hypothetical	protein	95
Methyltransf_25	PF13649.1	gi|568162904|ref|YP_008946194.1|	-	0.012	15.9	0.0	0.023	15.0	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
POTRA_1	PF08478.5	gi|568162904|ref|YP_008946194.1|	-	0.015	15.3	0.1	0.038	14.0	0.1	1.7	1	0	0	1	1	1	0	POTRA	domain,	FtsQ-type
Methyltransf_15	PF09445.5	gi|568162904|ref|YP_008946194.1|	-	0.031	13.8	0.1	0.23	11.0	0.0	2.1	1	1	1	2	2	2	0	RNA	cap	guanine-N2	methyltransferase
CRS1_YhbY	PF01985.16	gi|568162905|ref|YP_008946195.1|	-	1.8e-18	66.2	2.5	2.2e-18	66.0	1.7	1.1	1	0	0	1	1	1	1	CRS1	/	YhbY	(CRM)	domain
DUF1241	PF06840.6	gi|568162905|ref|YP_008946195.1|	-	0.026	13.7	0.3	0.027	13.7	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1241)
Pyr_redox	PF00070.22	gi|568162905|ref|YP_008946195.1|	-	0.14	12.5	1.1	0.26	11.7	0.8	1.4	1	1	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
EMG1	PF03587.9	gi|568162906|ref|YP_008946196.1|	-	2.5e-47	160.7	0.1	2.9e-47	160.6	0.1	1.0	1	0	0	1	1	1	1	EMG1/NEP1	methyltransferase
RHH_1	PF01402.16	gi|568162907|ref|YP_008946197.1|	-	0.056	13.3	0.5	0.15	11.9	0.1	2.1	2	0	0	2	2	2	0	Ribbon-helix-helix	protein,	copG	family
YppF	PF14178.1	gi|568162907|ref|YP_008946197.1|	-	0.25	10.8	1.9	13	5.3	0.1	3.0	3	0	0	3	3	3	0	YppF-like	protein
KxDL	PF10241.4	gi|568164727|ref|YP_008946199.1|	-	0.069	13.0	0.0	0.17	11.8	0.0	1.7	1	0	0	1	1	1	0	Uncharacterized	conserved	protein
VitK2_biosynth	PF02621.9	gi|568162909|ref|YP_008946200.1|	-	1.1e-52	178.7	0.1	1.3e-52	178.5	0.0	1.0	1	0	0	1	1	1	1	Menaquinone	biosynthesis
Peptidase_M50	PF02163.17	gi|568162909|ref|YP_008946200.1|	-	0.031	13.2	0.1	0.047	12.6	0.1	1.3	1	0	0	1	1	1	0	Peptidase	family	M50
NTPase_I-T	PF01931.13	gi|568162910|ref|YP_008946201.1|	-	1.1e-36	126.0	0.0	1.2e-36	125.9	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF84
Thioredoxin	PF00085.15	gi|568162912|ref|YP_008946203.1|	-	9.1e-29	99.2	0.0	1e-28	99.0	0.0	1.0	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.1	gi|568162912|ref|YP_008946203.1|	-	3.3e-09	36.9	0.0	1.1e-07	31.9	0.0	2.0	1	1	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin_8	PF13905.1	gi|568162912|ref|YP_008946203.1|	-	1e-06	28.7	0.1	0.0073	16.3	0.0	2.2	1	1	1	2	2	2	2	Thioredoxin-like
Redoxin	PF08534.5	gi|568162912|ref|YP_008946203.1|	-	6.7e-06	25.7	0.2	0.011	15.3	0.0	2.1	1	1	1	2	2	2	2	Redoxin
Thioredoxin_3	PF13192.1	gi|568162912|ref|YP_008946203.1|	-	2.5e-05	23.9	0.0	3.6e-05	23.4	0.0	1.3	1	0	0	1	1	1	1	Thioredoxin	domain
AhpC-TSA	PF00578.16	gi|568162912|ref|YP_008946203.1|	-	0.00014	21.5	0.1	0.091	12.4	0.0	2.1	1	1	1	2	2	2	2	AhpC/TSA	family
Phosducin	PF02114.11	gi|568162912|ref|YP_008946203.1|	-	0.00026	19.8	0.0	0.00026	19.8	0.0	1.1	1	0	0	1	1	1	1	Phosducin
Thioredoxin_9	PF14595.1	gi|568162912|ref|YP_008946203.1|	-	0.00027	20.5	0.0	0.00031	20.3	0.0	1.1	1	0	0	1	1	1	1	Thioredoxin
HyaE	PF07449.6	gi|568162912|ref|YP_008946203.1|	-	0.00074	19.3	0.0	0.0012	18.7	0.0	1.5	1	1	0	1	1	1	1	Hydrogenase-1	expression	protein	HyaE
Thioredoxin_6	PF13848.1	gi|568162912|ref|YP_008946203.1|	-	0.0013	18.5	0.0	0.0023	17.7	0.0	1.3	1	1	0	1	1	1	1	Thioredoxin-like	domain
Calsequestrin	PF01216.12	gi|568162912|ref|YP_008946203.1|	-	0.0064	15.3	0.0	0.0064	15.3	0.0	1.1	1	0	0	1	1	1	1	Calsequestrin
DSBA	PF01323.15	gi|568162912|ref|YP_008946203.1|	-	0.13	11.7	0.4	0.66	9.5	0.0	1.9	1	1	1	2	2	2	0	DSBA-like	thioredoxin	domain
tRNA_deacylase	PF04414.7	gi|568162913|ref|YP_008946204.1|	-	8e-64	214.6	0.0	9.2e-64	214.4	0.0	1.0	1	0	0	1	1	1	1	D-aminoacyl-tRNA	deacylase
His_Phos_1	PF00300.17	gi|568162914|ref|YP_008946205.1|	-	1e-27	97.1	0.0	1.2e-27	96.9	0.0	1.1	1	0	0	1	1	1	1	Histidine	phosphatase	superfamily	(branch	1)
CBS	PF00571.23	gi|568162915|ref|YP_008946206.1|	-	3.1e-29	100.4	0.9	5.6e-15	54.8	0.1	2.1	2	0	0	2	2	2	2	CBS	domain
DUF1840	PF08895.6	gi|568162915|ref|YP_008946206.1|	-	0.0039	17.1	0.1	3	7.9	0.0	2.2	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF1840)
DisA_N	PF02457.11	gi|568162915|ref|YP_008946206.1|	-	0.0076	15.3	0.1	0.012	14.7	0.1	1.4	1	1	0	1	1	1	1	DisA	bacterial	checkpoint	controller	nucleotide-binding
FdhE	PF04216.7	gi|568162917|ref|YP_008946208.1|	-	2.3e-05	24.2	0.1	2.3e-05	24.2	0.1	2.0	2	0	0	2	2	2	1	Protein	involved	in	formate	dehydrogenase	formation
Mod_r	PF07200.8	gi|568162917|ref|YP_008946208.1|	-	5.2e-05	23.2	16.0	5.2e-05	23.2	11.1	5.0	1	1	3	5	5	5	2	Modifier	of	rudimentary	(Mod(r))	protein
AAA_13	PF13166.1	gi|568162917|ref|YP_008946208.1|	-	0.0015	17.0	62.5	0.0071	14.8	19.6	2.7	1	1	2	3	3	3	2	AAA	domain
SbcCD_C	PF13558.1	gi|568162917|ref|YP_008946208.1|	-	0.0022	17.8	0.0	0.028	14.3	0.0	2.5	2	0	0	2	2	2	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_27	PF13514.1	gi|568162917|ref|YP_008946208.1|	-	0.0036	15.0	43.9	0.013	13.2	0.1	3.3	1	1	2	3	3	3	3	AAA	domain
AAA_23	PF13476.1	gi|568162917|ref|YP_008946208.1|	-	0.0062	16.8	41.5	0.0062	16.8	28.7	4.3	1	1	2	3	3	2	1	AAA	domain
FliD_C	PF07195.7	gi|568162917|ref|YP_008946208.1|	-	0.014	14.7	0.7	0.014	14.7	0.5	5.6	1	1	2	3	3	3	0	Flagellar	hook-associated	protein	2	C-terminus
SMC_N	PF02463.14	gi|568162917|ref|YP_008946208.1|	-	0.015	14.5	22.1	0.067	12.4	14.0	2.8	2	1	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
PilJ	PF13675.1	gi|568162917|ref|YP_008946208.1|	-	0.043	14.1	11.7	4.9	7.5	1.5	4.3	3	1	0	3	3	3	0	Type	IV	pili	methyl-accepting	chemotaxis	transducer	N-term
DUF948	PF06103.6	gi|568162917|ref|YP_008946208.1|	-	0.12	12.2	40.5	2	8.3	1.2	6.4	3	2	3	7	7	6	0	Bacterial	protein	of	unknown	function	(DUF948)
DNA_ligase_ZBD	PF03119.11	gi|568162917|ref|YP_008946208.1|	-	0.14	11.9	0.6	0.31	10.7	0.4	1.6	1	0	0	1	1	1	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Filament	PF00038.16	gi|568162917|ref|YP_008946208.1|	-	0.39	10.1	55.6	0.71	9.2	3.5	3.8	1	1	2	3	3	3	0	Intermediate	filament	protein
Reo_sigmaC	PF04582.7	gi|568162917|ref|YP_008946208.1|	-	0.49	9.5	15.4	8.2	5.5	0.7	3.4	1	1	2	3	3	3	0	Reovirus	sigma	C	capsid	protein
REV	PF00424.13	gi|568162917|ref|YP_008946208.1|	-	0.51	10.2	11.4	1	9.2	0.5	3.9	2	2	1	3	3	3	0	REV	protein	(anti-repression	trans-activator	protein)
GAS	PF13851.1	gi|568162917|ref|YP_008946208.1|	-	1	8.4	64.8	1.7	7.7	12.2	4.8	1	1	3	4	4	4	0	Growth-arrest	specific	micro-tubule	binding
APG17	PF04108.7	gi|568162917|ref|YP_008946208.1|	-	1.3	7.7	44.6	0.057	12.2	11.4	3.7	2	2	1	3	3	3	0	Autophagy	protein	Apg17
NPV_P10	PF05531.7	gi|568162917|ref|YP_008946208.1|	-	1.6	9.0	36.1	5.9	7.2	0.7	6.2	3	2	3	6	6	6	0	Nucleopolyhedrovirus	P10	protein
Spc7	PF08317.6	gi|568162917|ref|YP_008946208.1|	-	2.6	6.6	67.2	1.9	7.0	17.7	3.8	1	1	4	5	5	5	0	Spc7	kinetochore	protein
Mnd1	PF03962.10	gi|568162917|ref|YP_008946208.1|	-	6.1	6.4	50.5	0.29	10.7	8.7	4.1	2	2	1	3	3	3	0	Mnd1	family
DUF869	PF05911.6	gi|568162917|ref|YP_008946208.1|	-	6.5	4.8	47.4	4.2	5.4	31.2	1.7	1	1	0	1	1	1	0	Plant	protein	of	unknown	function	(DUF869)
YlqD	PF11068.3	gi|568162917|ref|YP_008946208.1|	-	8.2	6.4	49.0	5	7.1	3.0	4.7	2	2	2	4	4	4	0	YlqD	protein
IU_nuc_hydro	PF01156.14	gi|568162918|ref|YP_008946209.1|	-	9.1e-75	251.7	0.0	1e-74	251.6	0.0	1.0	1	0	0	1	1	1	1	Inosine-uridine	preferring	nucleoside	hydrolase
FUR	PF01475.14	gi|568162919|ref|YP_008946210.1|	-	1.8e-21	76.2	0.1	2.2e-21	76.0	0.0	1.1	1	0	0	1	1	1	1	Ferric	uptake	regulator	family
HTH_20	PF12840.2	gi|568162919|ref|YP_008946210.1|	-	3.5e-06	26.7	0.0	6.1e-06	25.9	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
Penicillinase_R	PF03965.11	gi|568162919|ref|YP_008946210.1|	-	0.0024	17.9	0.0	0.0077	16.3	0.0	1.8	1	1	1	2	2	2	1	Penicillinase	repressor
PadR	PF03551.9	gi|568162919|ref|YP_008946210.1|	-	0.0025	17.5	0.1	0.0044	16.7	0.0	1.4	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_5	PF01022.15	gi|568162919|ref|YP_008946210.1|	-	0.01	15.5	0.0	0.18	11.4	0.0	2.4	1	1	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
TrmB	PF01978.14	gi|568162919|ref|YP_008946210.1|	-	0.015	15.0	0.0	0.051	13.2	0.0	2.1	2	1	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
HxlR	PF01638.12	gi|568162919|ref|YP_008946210.1|	-	0.023	14.3	0.0	0.035	13.7	0.0	1.4	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
HTH_24	PF13412.1	gi|568162919|ref|YP_008946210.1|	-	0.048	13.0	0.2	0.14	11.5	0.0	2.0	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|568162919|ref|YP_008946210.1|	-	0.057	13.0	0.2	0.21	11.2	0.0	2.2	2	1	0	2	2	2	0	HTH	domain
HTH_32	PF13565.1	gi|568162919|ref|YP_008946210.1|	-	0.057	14.2	0.0	0.14	12.9	0.0	1.7	2	0	0	2	2	2	0	Homeodomain-like	domain
MarR	PF01047.17	gi|568162919|ref|YP_008946210.1|	-	0.13	12.0	0.1	0.39	10.4	0.0	2.0	2	1	0	2	2	2	0	MarR	family
RGS-like	PF09128.6	gi|568162920|ref|YP_008946211.1|	-	0.015	14.7	0.0	0.023	14.2	0.0	1.3	1	0	0	1	1	1	0	Regulator	of	G	protein	signalling-like	domain
NurA	PF09376.5	gi|568164728|ref|YP_008946212.1|	-	2.1e-34	119.1	5.8	2.5e-34	118.8	4.0	1.1	1	0	0	1	1	1	1	NurA	domain
AAA_23	PF13476.1	gi|568162921|ref|YP_008946213.1|	-	8.2e-20	71.9	22.7	8.2e-20	71.9	15.7	6.9	1	1	3	4	4	1	1	AAA	domain
Rad50_zn_hook	PF04423.9	gi|568162921|ref|YP_008946213.1|	-	1.9e-14	52.8	1.6	1.9e-14	52.8	1.1	9.5	11	2	1	12	12	10	1	Rad50	zinc	hook	motif
AAA_27	PF13514.1	gi|568162921|ref|YP_008946213.1|	-	1e-11	43.3	76.7	4.3e-05	21.4	0.0	5.5	3	1	1	5	5	5	4	AAA	domain
SMC_N	PF02463.14	gi|568162921|ref|YP_008946213.1|	-	2.7e-11	43.1	2.2	2.7e-11	43.1	1.5	4.0	2	1	0	2	2	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_13	PF13166.1	gi|568162921|ref|YP_008946213.1|	-	3.3e-09	35.7	119.7	6e-05	21.7	20.1	5.8	1	1	3	5	5	5	5	AAA	domain
SbcCD_C	PF13558.1	gi|568162921|ref|YP_008946213.1|	-	2.9e-07	30.3	0.0	7.5e-07	28.9	0.0	1.7	1	0	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_21	PF13304.1	gi|568162921|ref|YP_008946213.1|	-	2e-06	28.0	35.5	4.4e-06	26.8	8.9	4.7	1	1	4	5	5	3	2	AAA	domain
AAA_29	PF13555.1	gi|568162921|ref|YP_008946213.1|	-	1.1e-05	24.8	0.0	2.3e-05	23.8	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
Reo_sigmaC	PF04582.7	gi|568162921|ref|YP_008946213.1|	-	3.5e-05	23.1	21.8	0.16	11.1	0.2	5.4	2	2	2	5	5	5	3	Reovirus	sigma	C	capsid	protein
DUF258	PF03193.11	gi|568162921|ref|YP_008946213.1|	-	5.3e-05	22.4	0.1	0.00037	19.7	0.1	2.5	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
ABC_tran	PF00005.22	gi|568162921|ref|YP_008946213.1|	-	0.00013	22.2	2.3	0.00013	22.2	1.6	5.4	1	1	0	2	2	1	1	ABC	transporter
IncA	PF04156.9	gi|568162921|ref|YP_008946213.1|	-	0.0052	16.4	15.6	0.0052	16.4	10.8	5.8	1	1	4	5	5	5	2	IncA	protein
DUF904	PF06005.7	gi|568162921|ref|YP_008946213.1|	-	0.015	15.5	8.1	0.015	15.5	5.6	10.0	5	3	2	7	7	3	0	Protein	of	unknown	function	(DUF904)
Myosin_tail_1	PF01576.14	gi|568162921|ref|YP_008946213.1|	-	0.045	11.4	112.7	0.0097	13.6	15.4	3.5	1	1	2	3	3	3	0	Myosin	tail
NPV_P10	PF05531.7	gi|568162921|ref|YP_008946213.1|	-	0.051	13.8	58.5	0.2	11.9	0.7	9.3	4	2	3	8	8	8	0	Nucleopolyhedrovirus	P10	protein
Miro	PF08477.8	gi|568162921|ref|YP_008946213.1|	-	0.063	13.7	0.2	0.063	13.7	0.2	4.5	3	2	2	5	5	5	0	Miro-like	protein
Seryl_tRNA_N	PF02403.17	gi|568162921|ref|YP_008946213.1|	-	0.1	12.6	115.3	0.029	14.3	5.9	8.7	2	2	6	8	8	7	0	Seryl-tRNA	synthetase	N-terminal	domain
AXE1	PF05448.7	gi|568162921|ref|YP_008946213.1|	-	0.17	10.3	4.3	0.1	11.0	1.3	1.8	2	0	0	2	2	2	0	Acetyl	xylan	esterase	(AXE1)
GAS	PF13851.1	gi|568162921|ref|YP_008946213.1|	-	3.1	6.9	132.7	0.31	10.2	10.2	6.3	1	1	2	5	5	5	0	Growth-arrest	specific	micro-tubule	binding
DUF3584	PF12128.3	gi|568162921|ref|YP_008946213.1|	-	5.9	4.0	89.2	0.39	7.9	28.1	3.2	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF3584)
Metallophos	PF00149.23	gi|568162922|ref|YP_008946214.1|	-	1.5e-15	57.1	0.4	3.3e-15	56.0	0.3	1.6	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|568162922|ref|YP_008946214.1|	-	3.2e-13	49.8	0.0	4.9e-13	49.1	0.0	1.3	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Serine_rich	PF08824.5	gi|568162922|ref|YP_008946214.1|	-	0.11	12.1	0.1	0.64	9.7	0.0	2.1	1	1	1	2	2	2	0	Serine	rich	protein	interaction	domain
DUF87	PF01935.12	gi|568162923|ref|YP_008946215.1|	-	2.9e-48	164.6	3.7	4.4e-48	164.1	2.5	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF87
AAA_10	PF12846.2	gi|568162923|ref|YP_008946215.1|	-	9.2e-23	81.1	1.5	2.7e-22	79.6	1.1	1.7	1	1	0	1	1	1	1	AAA-like	domain
DUF853	PF05872.7	gi|568162923|ref|YP_008946215.1|	-	3.7e-12	45.3	0.0	1.5e-06	26.8	0.0	2.3	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
HAS-barrel	PF09378.5	gi|568162923|ref|YP_008946215.1|	-	1.5e-11	44.0	2.2	3.6e-11	42.8	0.0	2.8	3	1	0	3	3	3	1	HAS	barrel	domain
FtsK_SpoIIIE	PF01580.13	gi|568162923|ref|YP_008946215.1|	-	4.4e-06	26.3	0.1	0.0027	17.2	0.0	2.3	2	0	0	2	2	2	2	FtsK/SpoIIIE	family
TrwB_AAD_bind	PF10412.4	gi|568162923|ref|YP_008946215.1|	-	2.9e-05	22.8	0.0	0.00017	20.3	0.0	2.0	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
IF2_N	PF04760.10	gi|568162923|ref|YP_008946215.1|	-	0.023	14.3	0.2	0.34	10.6	0.1	2.5	2	0	0	2	2	2	0	Translation	initiation	factor	IF-2,	N-terminal	region
ABC_tran	PF00005.22	gi|568162923|ref|YP_008946215.1|	-	0.093	13.0	1.4	0.19	11.9	0.9	1.6	1	1	0	1	1	1	0	ABC	transporter
DEAD	PF00270.24	gi|568162923|ref|YP_008946215.1|	-	0.11	11.9	0.3	4.1	6.8	0.2	2.6	1	1	0	1	1	1	0	DEAD/DEAH	box	helicase
ResIII	PF04851.10	gi|568162923|ref|YP_008946215.1|	-	0.16	11.8	1.5	0.91	9.3	1.2	2.2	1	1	1	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
DUF892	PF05974.7	gi|568162924|ref|YP_008946216.1|	-	0.0012	18.7	8.4	0.059	13.1	0.7	2.2	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF892)
Phyto-Amp	PF15438.1	gi|568162924|ref|YP_008946216.1|	-	0.0032	17.1	0.7	1	8.9	0.1	2.0	1	1	1	2	2	2	2	Antigenic	membrane	protein	of	phytoplasma
Fz	PF01392.17	gi|568162924|ref|YP_008946216.1|	-	0.0047	17.2	0.1	3.3	8.0	0.0	2.0	1	1	1	2	2	2	2	Fz	domain
TRCF	PF03461.10	gi|568162924|ref|YP_008946216.1|	-	0.0096	15.8	0.2	5	7.1	0.0	2.2	2	0	0	2	2	2	2	TRCF	domain
Big_2	PF02368.13	gi|568162924|ref|YP_008946216.1|	-	0.012	15.4	0.0	6.2	6.7	0.0	2.4	2	0	0	2	2	2	0	Bacterial	Ig-like	domain	(group	2)
MobB	PF03205.9	gi|568162924|ref|YP_008946216.1|	-	0.016	14.9	2.1	0.19	11.4	0.2	2.0	1	1	1	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
DUF4423	PF14394.1	gi|568162924|ref|YP_008946216.1|	-	0.031	13.8	1.7	3.8	7.0	0.1	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4423)
DNA_ligase_A_C	PF04679.10	gi|568162924|ref|YP_008946216.1|	-	0.14	12.5	0.1	5.4	7.5	0.0	2.2	1	1	1	2	2	2	0	ATP	dependent	DNA	ligase	C	terminal	region
MOR2-PAG1_C	PF14225.1	gi|568162924|ref|YP_008946216.1|	-	0.25	11.0	1.2	13	5.4	0.1	2.0	1	1	1	2	2	2	0	Cell	morphogenesis	C-terminal
Ferritin	PF00210.19	gi|568162924|ref|YP_008946216.1|	-	0.43	10.3	4.5	3.7	7.3	0.4	2.0	1	1	1	2	2	2	0	Ferritin-like	domain
DUF1959	PF09218.5	gi|568162925|ref|YP_008946217.1|	-	0.0047	16.6	0.2	0.0076	16.0	0.1	1.5	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF1959)
Ferritin	PF00210.19	gi|568162925|ref|YP_008946217.1|	-	0.029	14.1	3.2	0.76	9.5	0.5	2.3	1	1	1	2	2	2	0	Ferritin-like	domain
FTR1	PF03239.9	gi|568162925|ref|YP_008946217.1|	-	0.057	12.3	0.0	0.064	12.2	0.0	1.1	1	0	0	1	1	1	0	Iron	permease	FTR1	family
FliL	PF03748.9	gi|568162925|ref|YP_008946217.1|	-	0.06	13.3	0.5	0.06	13.3	0.4	2.1	1	1	1	2	2	2	0	Flagellar	basal	body-associated	protein	FliL
Carb_kinase	PF01256.12	gi|568162926|ref|YP_008946218.1|	-	7.5e-55	185.8	0.1	1e-54	185.4	0.0	1.2	1	0	0	1	1	1	1	Carbohydrate	kinase
YjeF_N	PF03853.10	gi|568162926|ref|YP_008946218.1|	-	4.3e-40	137.0	0.0	7.4e-40	136.3	0.0	1.4	1	0	0	1	1	1	1	YjeF-related	protein	N-terminus
HK	PF02110.10	gi|568162926|ref|YP_008946218.1|	-	1.1e-07	31.2	0.1	4.5e-07	29.3	0.1	1.9	1	1	0	1	1	1	1	Hydroxyethylthiazole	kinase	family
Phos_pyr_kin	PF08543.7	gi|568162926|ref|YP_008946218.1|	-	0.00023	20.4	0.0	0.00041	19.6	0.0	1.3	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
KR	PF08659.5	gi|568162926|ref|YP_008946218.1|	-	0.013	15.2	0.0	0.024	14.3	0.0	1.4	1	0	0	1	1	1	0	KR	domain
adh_short	PF00106.20	gi|568162926|ref|YP_008946218.1|	-	0.071	13.0	0.0	0.14	12.0	0.0	1.4	1	0	0	1	1	1	0	short	chain	dehydrogenase
NEP	PF10167.4	gi|568162926|ref|YP_008946218.1|	-	0.19	11.4	0.8	2.1	8.0	0.0	2.7	3	0	0	3	3	3	0	Uncharacterised	conserved	protein
AhpC-TSA	PF00578.16	gi|568162927|ref|YP_008946219.1|	-	1.4e-39	134.6	0.1	1.6e-39	134.4	0.0	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|568162927|ref|YP_008946219.1|	-	1.2e-26	93.0	0.0	1.3e-26	92.8	0.0	1.0	1	0	0	1	1	1	1	Redoxin
Thioredoxin_8	PF13905.1	gi|568162927|ref|YP_008946219.1|	-	1.8e-05	24.7	0.0	2.6e-05	24.2	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin-like
DUF899	PF05988.7	gi|568162927|ref|YP_008946219.1|	-	0.0015	18.0	0.0	0.0016	17.9	0.0	1.0	1	0	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF899)
AhpC-TSA_2	PF13911.1	gi|568162927|ref|YP_008946219.1|	-	0.022	14.6	0.0	0.032	14.1	0.0	1.3	1	0	0	1	1	1	0	AhpC/TSA	antioxidant	enzyme
Costars	PF14705.1	gi|568162927|ref|YP_008946219.1|	-	0.091	12.7	0.0	0.82	9.7	0.0	2.1	2	0	0	2	2	2	0	Costars
AAA_22	PF13401.1	gi|568162927|ref|YP_008946219.1|	-	0.094	12.8	0.0	0.11	12.6	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
PEPcase_2	PF14010.1	gi|568162928|ref|YP_008946220.1|	-	2.8e-202	672.4	0.7	3.1e-202	672.2	0.5	1.0	1	0	0	1	1	1	1	Phosphoenolpyruvate	carboxylase
DUF4041	PF13250.1	gi|568162928|ref|YP_008946220.1|	-	0.17	11.4	3.0	0.37	10.3	0.3	2.4	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4041)
ArgK	PF03308.11	gi|568162930|ref|YP_008946222.1|	-	1.1e-86	289.9	0.3	1.4e-86	289.5	0.2	1.0	1	0	0	1	1	1	1	ArgK	protein
cobW	PF02492.14	gi|568162930|ref|YP_008946222.1|	-	3.9e-09	36.1	0.7	3.7e-08	33.0	0.5	2.2	1	1	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_10	PF12846.2	gi|568162930|ref|YP_008946222.1|	-	4.6e-06	26.2	0.1	1.1e-05	25.0	0.0	1.6	2	0	0	2	2	2	1	AAA-like	domain
DUF87	PF01935.12	gi|568162930|ref|YP_008946222.1|	-	6.1e-06	26.2	1.0	0.00013	21.8	0.1	2.1	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF87
GTP_EFTU	PF00009.22	gi|568162930|ref|YP_008946222.1|	-	1.5e-05	24.5	0.1	0.011	15.2	0.0	2.3	2	0	0	2	2	2	2	Elongation	factor	Tu	GTP	binding	domain
MobB	PF03205.9	gi|568162930|ref|YP_008946222.1|	-	1.5e-05	24.7	0.5	3.7e-05	23.4	0.0	1.8	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_17	PF13207.1	gi|568162930|ref|YP_008946222.1|	-	1.7e-05	25.6	0.5	3.9e-05	24.4	0.0	1.9	2	1	0	2	2	1	1	AAA	domain
AAA_19	PF13245.1	gi|568162930|ref|YP_008946222.1|	-	0.00011	21.8	0.1	0.00032	20.3	0.0	1.9	2	0	0	2	2	1	1	Part	of	AAA	domain
AAA_16	PF13191.1	gi|568162930|ref|YP_008946222.1|	-	0.00013	22.0	0.1	0.00021	21.3	0.0	1.4	1	0	0	1	1	1	1	AAA	ATPase	domain
NTPase_1	PF03266.10	gi|568162930|ref|YP_008946222.1|	-	0.00019	21.1	0.1	0.00055	19.6	0.1	1.8	1	0	0	1	1	1	1	NTPase
SRP54	PF00448.17	gi|568162930|ref|YP_008946222.1|	-	0.0002	20.8	0.0	0.035	13.5	0.0	2.2	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
AAA_18	PF13238.1	gi|568162930|ref|YP_008946222.1|	-	0.00037	20.8	1.6	0.0015	18.8	0.1	2.2	2	0	0	2	2	2	1	AAA	domain
TrwB_AAD_bind	PF10412.4	gi|568162930|ref|YP_008946222.1|	-	0.00042	19.0	0.0	0.00075	18.2	0.0	1.3	1	0	0	1	1	1	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
FtsK_SpoIIIE	PF01580.13	gi|568162930|ref|YP_008946222.1|	-	0.0005	19.6	0.1	0.0014	18.1	0.0	1.8	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
KAP_NTPase	PF07693.9	gi|568162930|ref|YP_008946222.1|	-	0.0012	17.9	0.0	0.0013	17.8	0.0	1.3	1	1	0	1	1	1	1	KAP	family	P-loop	domain
DUF258	PF03193.11	gi|568162930|ref|YP_008946222.1|	-	0.0012	18.0	0.0	0.0042	16.2	0.0	1.8	2	0	0	2	2	2	1	Protein	of	unknown	function,	DUF258
ATP_bind_1	PF03029.12	gi|568162930|ref|YP_008946222.1|	-	0.0013	18.3	0.0	0.0038	16.7	0.0	1.7	2	0	0	2	2	2	1	Conserved	hypothetical	ATP	binding	protein
AAA_22	PF13401.1	gi|568162930|ref|YP_008946222.1|	-	0.0014	18.7	0.0	0.003	17.7	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
NB-ARC	PF00931.17	gi|568162930|ref|YP_008946222.1|	-	0.0015	17.4	0.0	0.0026	16.6	0.0	1.3	1	0	0	1	1	1	1	NB-ARC	domain
ABC_tran	PF00005.22	gi|568162930|ref|YP_008946222.1|	-	0.0019	18.4	0.0	0.004	17.4	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
MMR_HSR1	PF01926.18	gi|568162930|ref|YP_008946222.1|	-	0.0053	16.7	1.5	0.0099	15.8	1.0	2.0	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
CbiA	PF01656.18	gi|568162930|ref|YP_008946222.1|	-	0.0056	16.0	0.0	0.012	15.0	0.0	1.6	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_30	PF13604.1	gi|568162930|ref|YP_008946222.1|	-	0.0079	15.7	0.0	0.013	15.1	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
Viral_helicase1	PF01443.13	gi|568162930|ref|YP_008946222.1|	-	0.0087	15.6	0.1	0.016	14.7	0.0	1.4	1	0	0	1	1	1	1	Viral	(Superfamily	1)	RNA	helicase
AAA_14	PF13173.1	gi|568162930|ref|YP_008946222.1|	-	0.0097	15.8	0.0	0.021	14.7	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|568162930|ref|YP_008946222.1|	-	0.011	15.2	0.2	0.024	14.1	0.1	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
Zeta_toxin	PF06414.7	gi|568162930|ref|YP_008946222.1|	-	0.013	14.6	0.0	0.026	13.6	0.0	1.5	1	0	0	1	1	1	0	Zeta	toxin
Miro	PF08477.8	gi|568162930|ref|YP_008946222.1|	-	0.016	15.6	0.2	0.039	14.4	0.0	1.7	2	0	0	2	2	1	0	Miro-like	protein
AAA_25	PF13481.1	gi|568162930|ref|YP_008946222.1|	-	0.017	14.5	0.0	0.033	13.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
DUF815	PF05673.8	gi|568162930|ref|YP_008946222.1|	-	0.019	13.9	0.0	0.034	13.0	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
AAA_28	PF13521.1	gi|568162930|ref|YP_008946222.1|	-	0.022	14.7	0.2	0.047	13.6	0.1	1.6	2	0	0	2	2	1	0	AAA	domain
DUF2075	PF09848.4	gi|568162930|ref|YP_008946222.1|	-	0.022	13.7	0.0	0.039	12.9	0.0	1.4	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
NACHT	PF05729.7	gi|568162930|ref|YP_008946222.1|	-	0.03	13.9	0.0	0.065	12.8	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
MipZ	PF09140.6	gi|568162930|ref|YP_008946222.1|	-	0.031	13.3	0.0	0.05	12.6	0.0	1.4	1	0	0	1	1	1	0	ATPase	MipZ
PRK	PF00485.13	gi|568162930|ref|YP_008946222.1|	-	0.048	13.2	0.1	0.082	12.4	0.1	1.3	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
T2SE	PF00437.15	gi|568162930|ref|YP_008946222.1|	-	0.055	12.3	0.4	0.16	10.8	0.0	1.9	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
AAA_11	PF13086.1	gi|568162930|ref|YP_008946222.1|	-	0.059	12.9	0.0	0.083	12.4	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
AAA_33	PF13671.1	gi|568162930|ref|YP_008946222.1|	-	0.067	13.0	0.1	0.12	12.2	0.1	1.4	1	0	0	1	1	1	0	AAA	domain
B12-binding	PF02310.14	gi|568162931|ref|YP_008946223.1|	-	9.4e-22	77.1	0.4	1.2e-21	76.8	0.3	1.1	1	0	0	1	1	1	1	B12	binding	domain
IMPDH	PF00478.20	gi|568162931|ref|YP_008946223.1|	-	0.017	14.0	0.3	0.022	13.6	0.2	1.1	1	0	0	1	1	1	0	IMP	dehydrogenase	/	GMP	reductase	domain
QRPTase_C	PF01729.14	gi|568162931|ref|YP_008946223.1|	-	0.032	13.7	0.1	0.039	13.4	0.1	1.2	1	0	0	1	1	1	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
TPP_enzyme_N	PF02776.13	gi|568162931|ref|YP_008946223.1|	-	0.045	13.2	0.0	2	7.9	0.0	2.1	2	0	0	2	2	2	0	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
Nitro_FeMo-Co	PF02579.12	gi|568162931|ref|YP_008946223.1|	-	0.074	13.1	0.6	16	5.6	0.1	2.7	2	1	2	4	4	4	0	Dinitrogenase	iron-molybdenum	cofactor
7kD_DNA_binding	PF02294.13	gi|568162932|ref|YP_008946224.1|	-	7.7e-42	140.8	4.1	8.7e-42	140.6	2.8	1.0	1	0	0	1	1	1	1	7kD	DNA-binding	domain
Trp_repressor	PF01371.14	gi|568164729|ref|YP_008946225.1|	-	0.004	17.0	0.0	0.0057	16.5	0.0	1.2	1	0	0	1	1	1	1	Trp	repressor	protein
Sigma70_r4_2	PF08281.7	gi|568164729|ref|YP_008946225.1|	-	0.0055	16.1	0.0	0.011	15.1	0.0	1.4	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_3	PF01381.17	gi|568164729|ref|YP_008946225.1|	-	0.0082	15.9	0.1	0.013	15.3	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix
HTH_23	PF13384.1	gi|568164729|ref|YP_008946225.1|	-	0.0093	15.5	0.0	0.017	14.7	0.0	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
Sigma70_r4	PF04545.11	gi|568164729|ref|YP_008946225.1|	-	0.0094	15.2	0.0	0.015	14.6	0.0	1.4	1	0	0	1	1	1	1	Sigma-70,	region	4
Terminase_5	PF06056.7	gi|568164729|ref|YP_008946225.1|	-	0.019	14.4	0.0	0.035	13.6	0.0	1.3	1	0	0	1	1	1	0	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_24	PF13412.1	gi|568164729|ref|YP_008946225.1|	-	0.061	12.7	0.0	0.1	11.9	0.0	1.4	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
GerE	PF00196.14	gi|568164729|ref|YP_008946225.1|	-	0.062	12.6	0.0	0.12	11.6	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
HTH_38	PF13936.1	gi|568164729|ref|YP_008946225.1|	-	0.091	12.3	0.0	0.14	11.7	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_Crp_2	PF13545.1	gi|568164729|ref|YP_008946225.1|	-	0.12	12.1	0.0	0.17	11.7	0.0	1.2	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
DUF357	PF04010.8	gi|568164729|ref|YP_008946225.1|	-	0.13	12.0	0.0	0.22	11.2	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF357)
tRNA-synt_2	PF00152.15	gi|568162933|ref|YP_008946226.1|	-	1.8e-93	312.9	0.4	2.3e-93	312.6	0.2	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.20	gi|568162933|ref|YP_008946226.1|	-	1.1e-10	41.2	0.2	2.1e-10	40.2	0.2	1.6	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.15	gi|568162933|ref|YP_008946226.1|	-	3e-09	36.4	0.7	3.2e-06	26.5	0.1	3.1	3	0	0	3	3	3	2	tRNA	synthetases	class	II	core	domain	(F)
LEM	PF03020.10	gi|568162933|ref|YP_008946226.1|	-	0.028	13.8	0.1	0.16	11.4	0.0	2.3	2	0	0	2	2	2	0	LEM	domain
tRNA-synt_2b	PF00587.20	gi|568162933|ref|YP_008946226.1|	-	0.068	12.7	0.2	8.2	5.9	0.0	2.4	2	0	0	2	2	2	0	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
SAP	PF02037.22	gi|568162933|ref|YP_008946226.1|	-	0.11	12.0	0.1	0.73	9.4	0.0	2.5	2	0	0	2	2	2	0	SAP	domain
Phage_DsbA	PF11126.3	gi|568162933|ref|YP_008946226.1|	-	0.44	10.6	5.4	0.8	9.8	0.1	3.1	3	0	0	3	3	3	0	Transcriptional	regulator	DsbA
Peptidase_M50	PF02163.17	gi|568162934|ref|YP_008946227.1|	-	1.3e-26	92.7	4.1	2.5e-26	91.8	0.1	2.5	2	1	0	2	2	2	1	Peptidase	family	M50
PDZ_2	PF13180.1	gi|568162934|ref|YP_008946227.1|	-	0.02	14.8	0.0	0.065	13.1	0.0	1.9	2	0	0	2	2	2	0	PDZ	domain
NTP_transf_2	PF01909.18	gi|568162935|ref|YP_008946228.1|	-	2.2e-07	31.0	0.1	7.7e-07	29.3	0.1	2.0	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
DUF1122	PF06557.6	gi|568162936|ref|YP_008946229.1|	-	2.5e-72	241.5	0.2	2.8e-72	241.3	0.2	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1122)
Radical_SAM	PF04055.16	gi|568162937|ref|YP_008946230.1|	-	2.5e-10	40.8	0.1	3.6e-08	33.7	0.0	2.5	2	1	1	3	3	3	2	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|568162937|ref|YP_008946230.1|	-	3.3e-09	36.8	0.0	6.1e-09	35.9	0.0	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|568162937|ref|YP_008946230.1|	-	2e-06	27.9	0.0	3.9e-06	27.0	0.0	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
eRF1_1	PF03463.10	gi|568162938|ref|YP_008946231.1|	-	2.8e-27	94.8	3.2	4.3e-27	94.2	0.9	2.0	2	0	0	2	2	2	1	eRF1	domain	1
eRF1_3	PF03465.10	gi|568162938|ref|YP_008946231.1|	-	7.5e-21	74.5	6.2	3.4e-20	72.3	0.2	2.8	2	1	0	2	2	2	1	eRF1	domain	3
eRF1_2	PF03464.10	gi|568162938|ref|YP_008946231.1|	-	3.5e-14	53.2	1.3	6.1e-14	52.4	0.4	1.9	2	0	0	2	2	2	1	eRF1	domain	2
Maelstrom	PF13017.1	gi|568162938|ref|YP_008946231.1|	-	0.019	14.4	0.7	0.26	10.7	0.5	2.4	1	1	0	1	1	1	0	piRNA	pathway	germ-plasm	component
Acetyltransf_1	PF00583.19	gi|568162939|ref|YP_008946232.1|	-	4e-12	46.0	0.3	5.7e-12	45.5	0.2	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|568162939|ref|YP_008946232.1|	-	7.6e-12	45.2	0.6	1.1e-11	44.7	0.4	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|568162939|ref|YP_008946232.1|	-	1.4e-08	34.8	3.8	2.2e-08	34.1	1.5	1.8	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|568162939|ref|YP_008946232.1|	-	2.5e-06	27.5	0.0	3.2e-06	27.2	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|568162939|ref|YP_008946232.1|	-	3.9e-05	23.3	0.1	5.6e-05	22.8	0.0	1.2	1	0	0	1	1	1	1	FR47-like	protein
GNAT_acetyltr_2	PF13718.1	gi|568162939|ref|YP_008946232.1|	-	0.0066	15.7	0.0	0.14	11.4	0.0	2.0	1	1	1	2	2	2	1	GNAT	acetyltransferase	2
Acetyltransf_8	PF13523.1	gi|568162939|ref|YP_008946232.1|	-	0.032	14.1	0.0	0.044	13.6	0.0	1.3	1	0	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|568162939|ref|YP_008946232.1|	-	0.067	13.0	0.0	0.19	11.5	0.0	1.9	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
DNA_pol_B	PF00136.16	gi|568162940|ref|YP_008946233.1|	-	2.5e-56	191.4	0.3	3.6e-56	190.8	0.2	1.2	1	0	0	1	1	1	1	DNA	polymerase	family	B
DNA_pol_B_exo1	PF03104.14	gi|568162940|ref|YP_008946233.1|	-	3.7e-38	131.1	11.3	1.2e-37	129.5	5.6	2.9	2	1	0	2	2	2	1	DNA	polymerase	family	B,	exonuclease	domain
RNase_H_2	PF13482.1	gi|568162940|ref|YP_008946233.1|	-	3.8e-06	26.7	0.6	1.4e-05	24.9	0.1	2.3	3	0	0	3	3	3	1	RNase_H	superfamily
Toprim_4	PF13662.1	gi|568162941|ref|YP_008946234.1|	-	1.8e-09	37.4	0.0	5.5e-09	35.9	0.0	1.8	1	0	0	1	1	1	1	Toprim	domain
Toprim	PF01751.17	gi|568162941|ref|YP_008946234.1|	-	1.8e-05	24.6	2.5	5.6e-05	23.0	0.1	2.6	2	0	0	2	2	2	1	Toprim	domain
DUF1822	PF08852.6	gi|568162941|ref|YP_008946234.1|	-	0.0037	16.1	0.2	0.004	16.0	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1822)
Toprim_2	PF13155.1	gi|568162941|ref|YP_008946234.1|	-	0.026	14.8	0.1	0.091	13.0	0.0	1.9	1	1	1	2	2	2	0	Toprim-like
RNB	PF00773.14	gi|568162941|ref|YP_008946234.1|	-	0.077	12.2	0.6	0.11	11.7	0.4	1.2	1	0	0	1	1	1	0	RNB	domain
B5	PF03484.10	gi|568162941|ref|YP_008946234.1|	-	0.088	12.6	1.5	3	7.7	0.2	3.2	2	1	0	2	2	2	0	tRNA	synthetase	B5	domain
TPR_12	PF13424.1	gi|568162941|ref|YP_008946234.1|	-	0.1	12.5	0.1	0.19	11.6	0.1	1.3	1	0	0	1	1	1	0	Tetratricopeptide	repeat
FliP	PF00813.15	gi|568162941|ref|YP_008946234.1|	-	0.22	11.1	2.0	0.37	10.4	1.4	1.3	1	0	0	1	1	1	0	FliP	family
tRNA-synt_1b	PF00579.20	gi|568162942|ref|YP_008946235.1|	-	1.4e-47	162.2	0.5	9.4e-36	123.4	0.1	2.0	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(W	and	Y)
Ribosomal_L6e	PF01159.14	gi|568162943|ref|YP_008946236.1|	-	0.0026	17.9	0.8	0.0031	17.7	0.6	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L6e
UPF0047	PF01894.12	gi|568162944|ref|YP_008946237.1|	-	6.3e-38	129.2	0.0	7.3e-38	129.0	0.0	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0047
AIRS	PF00586.19	gi|568162945|ref|YP_008946238.1|	-	7.1e-10	39.0	0.0	1.8e-09	37.7	0.0	1.7	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
AIRS_C	PF02769.17	gi|568162945|ref|YP_008946238.1|	-	4.4e-07	30.0	0.1	9.5e-07	28.9	0.1	1.5	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
Ribosomal_S13	PF00416.17	gi|568162946|ref|YP_008946239.1|	-	2.7e-37	127.4	0.3	3.3e-37	127.1	0.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S13/S18
HHH_4	PF14490.1	gi|568162946|ref|YP_008946239.1|	-	0.0057	16.3	0.1	0.0083	15.8	0.0	1.3	1	0	0	1	1	1	1	Helix-hairpin-helix	containing	domain
FbpA	PF05833.6	gi|568162946|ref|YP_008946239.1|	-	0.022	13.2	0.0	0.026	13.1	0.0	1.1	1	0	0	1	1	1	0	Fibronectin-binding	protein	A	N-terminus	(FbpA)
S4	PF01479.20	gi|568162947|ref|YP_008946240.1|	-	2.4e-15	55.6	0.1	5.4e-15	54.5	0.1	1.6	1	0	0	1	1	1	1	S4	domain
Ribosomal_S4	PF00163.14	gi|568162947|ref|YP_008946240.1|	-	0.0027	18.0	0.8	0.0049	17.2	0.2	1.8	1	1	1	2	2	2	1	Ribosomal	protein	S4/S9	N-terminal	domain
Ribosomal_S11	PF00411.14	gi|568162948|ref|YP_008946241.1|	-	3.6e-44	149.4	0.4	4.1e-44	149.2	0.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S11
RNA_pol_A_bac	PF01000.21	gi|568162949|ref|YP_008946242.1|	-	5.7e-28	97.3	0.0	1e-27	96.4	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/RpoA	insert	domain
RNA_pol_L	PF01193.19	gi|568162949|ref|YP_008946242.1|	-	1.1e-10	40.4	0.0	1.4e-10	40.1	0.0	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
Fer4_9	PF13187.1	gi|568162949|ref|YP_008946242.1|	-	0.00016	21.8	10.5	0.0003	20.9	3.2	2.3	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|568162949|ref|YP_008946242.1|	-	0.0052	17.1	7.8	0.11	12.8	3.5	2.4	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|568162949|ref|YP_008946242.1|	-	0.045	13.5	11.1	0.055	13.2	3.9	2.6	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|568162949|ref|YP_008946242.1|	-	0.8	9.7	8.6	2.1	8.4	0.1	2.9	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|568162949|ref|YP_008946242.1|	-	1.6	9.5	8.6	16	6.3	0.0	3.2	3	0	0	3	3	3	0	4Fe-4S	double	cluster	binding	domain
Fer4_6	PF12837.2	gi|568162949|ref|YP_008946242.1|	-	10	6.2	17.2	0.6	10.0	0.5	3.5	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Ribosomal_L18e	PF00828.14	gi|568162950|ref|YP_008946243.1|	-	1e-14	54.9	0.2	1.3e-14	54.6	0.2	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L18e/L15
Ribosomal_L13	PF00572.13	gi|568162951|ref|YP_008946244.1|	-	4.1e-28	97.9	0.3	5.1e-28	97.6	0.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L13
Ribosomal_S9	PF00380.14	gi|568162952|ref|YP_008946245.1|	-	1.9e-27	95.8	0.1	2.2e-27	95.7	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S9/S16
RNA_pol_N	PF01194.12	gi|568162953|ref|YP_008946246.1|	-	5.1e-31	106.4	0.6	5.6e-31	106.3	0.4	1.0	1	0	0	1	1	1	1	RNA	polymerases	N	/	8	kDa	subunit
Chordopox_RPO7	PF05864.7	gi|568162953|ref|YP_008946246.1|	-	0.19	11.8	0.8	0.41	10.7	0.5	1.6	1	1	0	1	1	1	0	Chordopoxvirus	DNA-directed	RNA	polymerase	7	kDa	polypeptide	(RPO7)
Ribosomal_S2	PF00318.15	gi|568162954|ref|YP_008946247.1|	-	3.6e-41	140.7	0.0	1.6e-21	76.5	0.0	2.1	1	1	1	2	2	2	2	Ribosomal	protein	S2
Memo	PF01875.12	gi|568162955|ref|YP_008946248.1|	-	1.8e-87	292.7	0.0	2e-87	292.5	0.0	1.0	1	0	0	1	1	1	1	Memo-like	protein
LigB	PF02900.13	gi|568162955|ref|YP_008946248.1|	-	0.0042	16.1	0.0	0.012	14.6	0.0	1.8	1	1	0	1	1	1	1	Catalytic	LigB	subunit	of	aromatic	ring-opening	dioxygenase
FMN_dh	PF01070.13	gi|568162957|ref|YP_008946250.1|	-	1.6e-21	76.5	0.0	4.3e-15	55.4	0.0	2.0	1	1	1	2	2	2	2	FMN-dependent	dehydrogenase
IMPDH	PF00478.20	gi|568162957|ref|YP_008946250.1|	-	0.012	14.4	0.4	0.44	9.3	0.1	2.4	3	0	0	3	3	3	0	IMP	dehydrogenase	/	GMP	reductase	domain
F_bP_aldolase	PF01116.15	gi|568162957|ref|YP_008946250.1|	-	0.16	11.0	0.0	0.59	9.1	0.0	1.8	2	0	0	2	2	2	0	Fructose-bisphosphate	aldolase	class-II
polyprenyl_synt	PF00348.12	gi|568162958|ref|YP_008946251.1|	-	3.1e-85	285.1	0.2	3.8e-85	284.8	0.1	1.1	1	0	0	1	1	1	1	Polyprenyl	synthetase
Glycos_transf_4	PF00953.16	gi|568162959|ref|YP_008946252.1|	-	3.9e-32	111.2	22.5	3.9e-32	111.2	15.6	2.6	2	1	1	3	3	3	1	Glycosyl	transferase	family	4
DUF3938	PF13074.1	gi|568162959|ref|YP_008946252.1|	-	0.037	13.8	6.9	0.28	11.0	1.8	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3938)
HAD_2	PF13419.1	gi|568162960|ref|YP_008946253.1|	-	1.5e-21	77.3	0.0	1.8e-21	77.1	0.0	1.0	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|568162960|ref|YP_008946253.1|	-	6e-14	52.9	0.1	5.1e-12	46.6	0.1	2.0	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.2	gi|568162960|ref|YP_008946253.1|	-	2e-10	41.1	0.1	2.5e-10	40.8	0.0	1.1	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|568162960|ref|YP_008946253.1|	-	3.2e-05	23.5	0.0	9.9e-05	21.9	0.0	1.9	2	0	0	2	2	2	1	HAD-hyrolase-like
Hydrolase_6	PF13344.1	gi|568162960|ref|YP_008946253.1|	-	7e-05	22.6	0.3	0.00054	19.8	0.2	2.1	1	1	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.7	gi|568162960|ref|YP_008946253.1|	-	0.0023	17.5	3.6	0.45	10.0	0.9	3.2	1	1	1	2	2	2	1	haloacid	dehalogenase-like	hydrolase
NIF	PF03031.13	gi|568162960|ref|YP_008946253.1|	-	0.035	13.7	0.1	0.17	11.5	0.0	1.9	1	1	0	1	1	1	0	NLI	interacting	factor-like	phosphatase
Allene_ox_cyc	PF06351.6	gi|568162960|ref|YP_008946253.1|	-	0.053	12.9	0.0	0.064	12.6	0.0	1.2	1	0	0	1	1	1	0	Allene	oxide	cyclase
COX1	PF00115.15	gi|568162961|ref|YP_008946254.1|	-	7.1e-60	202.8	57.8	7.1e-60	202.8	40.1	2.5	2	1	1	3	3	3	2	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
DUF2975	PF11188.3	gi|568162963|ref|YP_008946256.1|	-	0.11	12.1	4.3	0.15	11.7	2.1	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2975)
RDD	PF06271.7	gi|568162963|ref|YP_008946256.1|	-	0.51	10.2	5.7	1.8	8.4	3.9	1.8	1	1	0	1	1	1	0	RDD	family
DUF3955	PF13127.1	gi|568162963|ref|YP_008946256.1|	-	0.79	9.3	6.2	0.39	10.3	0.4	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3955)
DUF485	PF04341.7	gi|568162963|ref|YP_008946256.1|	-	1	9.1	5.2	0.3	10.8	1.4	1.6	1	1	1	2	2	2	0	Protein	of	unknown	function,	DUF485
DUF2905	PF11146.3	gi|568162963|ref|YP_008946256.1|	-	2	8.4	7.6	8.4	6.4	5.2	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2905)
TatD_DNase	PF01026.16	gi|568162964|ref|YP_008946257.1|	-	1.2e-48	165.5	0.0	1.5e-48	165.2	0.0	1.0	1	0	0	1	1	1	1	TatD	related	DNase
Antitoxin-MazE	PF04014.13	gi|568162965|ref|YP_008946258.1|	-	1e-10	41.0	0.2	1.2e-10	40.9	0.1	1.1	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
eIF-1a	PF01176.14	gi|568162965|ref|YP_008946258.1|	-	0.00088	18.6	0.2	0.0011	18.3	0.1	1.3	1	0	0	1	1	1	1	Translation	initiation	factor	1A	/	IF-1
DUF1905	PF08922.6	gi|568162965|ref|YP_008946258.1|	-	0.065	12.8	0.1	0.088	12.3	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1905)
DUF4387	PF14330.1	gi|568162965|ref|YP_008946258.1|	-	0.13	12.5	0.2	0.14	12.5	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4387)
TrmB	PF01978.14	gi|568162966|ref|YP_008946259.1|	-	1.9e-15	56.3	0.2	2.5e-15	55.9	0.2	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|568162966|ref|YP_008946259.1|	-	8.2e-07	28.6	0.0	1.3e-06	27.9	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_5	PF01022.15	gi|568162966|ref|YP_008946259.1|	-	9.8e-06	25.1	0.2	2e-05	24.1	0.2	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
MarR	PF01047.17	gi|568162966|ref|YP_008946259.1|	-	5.6e-05	22.7	0.1	8.6e-05	22.1	0.1	1.3	1	0	0	1	1	1	1	MarR	family
TFIIE_alpha	PF02002.12	gi|568162966|ref|YP_008946259.1|	-	0.00011	21.6	0.3	0.00017	21.0	0.2	1.3	1	1	0	1	1	1	1	TFIIE	alpha	subunit
HTH_27	PF13463.1	gi|568162966|ref|YP_008946259.1|	-	0.00026	21.2	0.0	0.00038	20.7	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
z-alpha	PF02295.12	gi|568162966|ref|YP_008946259.1|	-	0.0018	18.0	0.4	0.0035	17.0	0.1	1.6	2	0	0	2	2	2	1	Adenosine	deaminase	z-alpha	domain
HTH_24	PF13412.1	gi|568162966|ref|YP_008946259.1|	-	0.0032	16.7	0.3	0.006	15.9	0.2	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_20	PF12840.2	gi|568162966|ref|YP_008946259.1|	-	0.013	15.3	0.2	0.042	13.6	0.1	1.8	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_DeoR	PF08220.7	gi|568162966|ref|YP_008946259.1|	-	0.017	14.6	0.2	0.043	13.3	0.0	1.7	2	0	0	2	2	2	0	DeoR-like	helix-turn-helix	domain
DUF4423	PF14394.1	gi|568162966|ref|YP_008946259.1|	-	0.035	13.6	0.3	0.05	13.1	0.2	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
DUF2250	PF10007.4	gi|568162966|ref|YP_008946259.1|	-	0.038	13.9	0.3	0.055	13.3	0.2	1.4	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Fe_dep_repress	PF01325.14	gi|568162966|ref|YP_008946259.1|	-	0.042	13.7	0.1	0.096	12.6	0.1	1.8	1	1	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_36	PF13730.1	gi|568162966|ref|YP_008946259.1|	-	0.11	12.6	0.3	0.24	11.5	0.2	1.7	1	1	0	1	1	1	0	Helix-turn-helix	domain
ATP_bind_4	PF01902.12	gi|568162967|ref|YP_008946260.1|	-	3.4e-58	196.6	0.6	3.7e-58	196.4	0.4	1.0	1	0	0	1	1	1	1	ATP-binding	region
QueC	PF06508.8	gi|568162967|ref|YP_008946260.1|	-	0.0054	16.0	0.0	0.085	12.1	0.0	2.4	2	1	1	3	3	3	1	Queuosine	biosynthesis	protein	QueC
ThiI	PF02568.9	gi|568162967|ref|YP_008946260.1|	-	0.085	12.3	0.0	1.3	8.4	0.0	2.2	1	1	0	1	1	1	0	Thiamine	biosynthesis	protein	(ThiI)
DOT1	PF08123.8	gi|568162968|ref|YP_008946261.1|	-	2.3e-07	30.3	0.0	8.2e-07	28.5	0.0	1.7	2	0	0	2	2	2	1	Histone	methylation	protein	DOT1
Methyltransf_26	PF13659.1	gi|568162968|ref|YP_008946261.1|	-	0.00014	21.8	0.0	0.00021	21.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|568162968|ref|YP_008946261.1|	-	0.00061	18.8	0.0	0.00081	18.4	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_4	PF02390.12	gi|568162968|ref|YP_008946261.1|	-	0.0062	15.5	0.0	0.0082	15.2	0.0	1.2	1	0	0	1	1	1	1	Putative	methyltransferase
Methyltransf_31	PF13847.1	gi|568162968|ref|YP_008946261.1|	-	0.0099	15.4	0.1	0.014	14.9	0.1	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
N6_N4_Mtase	PF01555.13	gi|568162968|ref|YP_008946261.1|	-	0.012	15.0	0.0	0.024	14.1	0.0	1.4	2	0	0	2	2	2	0	DNA	methylase
MetW	PF07021.7	gi|568162968|ref|YP_008946261.1|	-	0.018	14.4	0.0	0.029	13.7	0.0	1.4	1	0	0	1	1	1	0	Methionine	biosynthesis	protein	MetW
Methyltransf_18	PF12847.2	gi|568162968|ref|YP_008946261.1|	-	0.021	15.3	0.0	0.049	14.2	0.0	1.8	1	1	0	1	1	1	0	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|568162968|ref|YP_008946261.1|	-	0.025	14.3	0.0	0.033	13.9	0.0	1.4	1	1	0	1	1	1	0	Methyltransferase	domain
FtsJ	PF01728.14	gi|568162968|ref|YP_008946261.1|	-	0.045	13.7	0.0	0.056	13.4	0.0	1.2	1	0	0	1	1	1	0	FtsJ-like	methyltransferase
PrmA	PF06325.8	gi|568162968|ref|YP_008946261.1|	-	0.074	12.1	0.0	0.091	11.8	0.0	1.1	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_11	PF08241.7	gi|568162968|ref|YP_008946261.1|	-	0.099	13.1	0.0	0.3	11.6	0.0	1.8	3	0	0	3	3	2	0	Methyltransferase	domain
MTS	PF05175.9	gi|568162968|ref|YP_008946261.1|	-	0.099	12.0	0.0	0.13	11.5	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	small	domain
NTP_transf_3	PF12804.2	gi|568162969|ref|YP_008946262.1|	-	8e-17	61.7	0.0	1e-16	61.4	0.0	1.3	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
MoeA_N	PF03453.12	gi|568162970|ref|YP_008946263.1|	-	5.3e-41	139.6	0.0	8.5e-41	139.0	0.0	1.3	1	0	0	1	1	1	1	MoeA	N-terminal	region	(domain	I	and	II)
MoCF_biosynth	PF00994.19	gi|568162970|ref|YP_008946263.1|	-	2.5e-22	78.8	0.0	4.9e-22	77.8	0.0	1.5	2	0	0	2	2	2	1	Probable	molybdopterin	binding	domain
7TMR-HDED	PF07697.6	gi|568162970|ref|YP_008946263.1|	-	0.027	14.2	0.2	0.027	14.2	0.1	2.2	3	0	0	3	3	3	0	7TM-HD	extracellular
LicD	PF04991.8	gi|568162970|ref|YP_008946263.1|	-	0.048	13.7	0.0	0.73	9.9	0.0	2.1	2	0	0	2	2	2	0	LicD	family
MMS22L_N	PF14910.1	gi|568162970|ref|YP_008946263.1|	-	0.088	11.0	0.0	0.13	10.5	0.0	1.1	1	0	0	1	1	1	0	S-phase	genomic	integrity	recombination	mediator,	N-terminal
MobB	PF03205.9	gi|568162971|ref|YP_008946264.1|	-	1.9e-24	85.9	0.0	2.3e-24	85.7	0.0	1.2	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Miro	PF08477.8	gi|568162971|ref|YP_008946264.1|	-	0.019	15.4	0.1	0.032	14.7	0.0	1.4	1	0	0	1	1	1	0	Miro-like	protein
Arch_ATPase	PF01637.13	gi|568162971|ref|YP_008946264.1|	-	0.068	12.8	0.1	0.068	12.8	0.0	1.4	1	1	0	1	1	1	0	Archaeal	ATPase
Methyltransf_11	PF08241.7	gi|568162972|ref|YP_008946265.1|	-	4.4e-16	59.1	0.0	6.6e-16	58.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|568162972|ref|YP_008946265.1|	-	3.7e-10	39.7	0.0	6.4e-10	38.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|568162972|ref|YP_008946265.1|	-	1.2e-09	37.6	0.1	9.9e-09	34.6	0.0	2.1	1	1	1	2	2	2	1	ubiE/COQ5	methyltransferase	family
Methyltransf_12	PF08242.7	gi|568162972|ref|YP_008946265.1|	-	2.5e-08	34.2	0.0	4.4e-08	33.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|568162972|ref|YP_008946265.1|	-	1e-07	31.6	0.0	1.5e-07	31.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|568162972|ref|YP_008946265.1|	-	5.4e-07	29.9	0.0	8.8e-07	29.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|568162972|ref|YP_008946265.1|	-	9.8e-05	22.9	0.0	0.00019	21.9	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
DREV	PF05219.7	gi|568162972|ref|YP_008946265.1|	-	0.0072	15.2	0.0	0.0089	14.9	0.0	1.3	1	0	0	1	1	1	1	DREV	methyltransferase
Methyltransf_8	PF05148.10	gi|568162972|ref|YP_008946265.1|	-	0.018	14.7	0.0	0.023	14.3	0.0	1.3	1	0	0	1	1	1	0	Hypothetical	methyltransferase
Methyltransf_26	PF13659.1	gi|568162972|ref|YP_008946265.1|	-	0.086	12.8	0.0	0.61	10.1	0.0	2.0	1	1	0	1	1	1	0	Methyltransferase	domain
DUF4015	PF13200.1	gi|568162974|ref|YP_008946267.1|	-	0.0057	15.6	0.1	0.007	15.3	0.1	1.1	1	0	0	1	1	1	1	Putative	glycosyl	hydrolase	domain
Gly-zipper_OmpA	PF13436.1	gi|568162974|ref|YP_008946267.1|	-	1.2	8.8	3.2	1.6	8.3	2.2	1.2	1	0	0	1	1	1	0	Glycine-zipper	containing	OmpA-like	membrane	domain
FlaC_arch	PF05377.6	gi|568162975|ref|YP_008946268.1|	-	0.11	12.3	0.1	0.24	11.3	0.1	1.6	1	0	0	1	1	1	0	Flagella	accessory	protein	C	(FlaC)
Fe_dep_repr_C	PF02742.10	gi|568162976|ref|YP_008946269.1|	-	1.1e-28	98.6	1.7	1.5e-28	98.2	0.3	1.8	2	0	0	2	2	2	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
Fe_dep_repress	PF01325.14	gi|568162976|ref|YP_008946269.1|	-	5.3e-12	45.4	0.1	1.9e-11	43.7	0.0	2.0	2	0	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_45	PF14947.1	gi|568162976|ref|YP_008946269.1|	-	8.8e-09	35.0	0.6	1.7e-08	34.1	0.1	1.7	2	0	0	2	2	1	1	Winged	helix-turn-helix
HTH_27	PF13463.1	gi|568162976|ref|YP_008946269.1|	-	6.3e-08	32.8	0.0	1.4e-07	31.6	0.0	1.6	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_5	PF01022.15	gi|568162976|ref|YP_008946269.1|	-	1.3e-06	27.9	0.0	2.4e-06	27.0	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
MarR	PF01047.17	gi|568162976|ref|YP_008946269.1|	-	3.4e-06	26.6	0.0	8.4e-06	25.4	0.0	1.6	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.2	gi|568162976|ref|YP_008946269.1|	-	9.3e-06	25.2	0.1	2.4e-05	23.9	0.0	1.7	2	0	0	2	2	1	1	MarR	family
FeoA	PF04023.9	gi|568162976|ref|YP_008946269.1|	-	1.5e-05	24.8	0.1	5.2e-05	23.1	0.0	1.9	2	0	0	2	2	2	1	FeoA	domain
HTH_DeoR	PF08220.7	gi|568162976|ref|YP_008946269.1|	-	2.2e-05	23.8	0.1	5.6e-05	22.5	0.1	1.7	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
HTH_24	PF13412.1	gi|568162976|ref|YP_008946269.1|	-	2.7e-05	23.4	0.1	7e-05	22.1	0.0	1.8	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HemN_C	PF06969.11	gi|568162976|ref|YP_008946269.1|	-	0.00017	21.5	0.2	0.00046	20.1	0.0	1.8	2	0	0	2	2	1	1	HemN	C-terminal	domain
HTH_41	PF14502.1	gi|568162976|ref|YP_008946269.1|	-	0.00035	20.1	0.0	0.00093	18.7	0.0	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|568162976|ref|YP_008946269.1|	-	0.0004	20.0	0.1	0.00089	18.9	0.0	1.6	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
DUF4423	PF14394.1	gi|568162976|ref|YP_008946269.1|	-	0.00057	19.4	0.1	0.0014	18.1	0.0	1.7	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
GntR	PF00392.16	gi|568162976|ref|YP_008946269.1|	-	0.0019	17.5	0.0	0.025	14.0	0.0	2.7	3	0	0	3	3	3	1	Bacterial	regulatory	proteins,	gntR	family
FeoC	PF09012.5	gi|568162976|ref|YP_008946269.1|	-	0.0025	17.4	0.0	0.0064	16.1	0.0	1.7	1	1	0	1	1	1	1	FeoC	like	transcriptional	regulator
HTH_1	PF00126.22	gi|568162976|ref|YP_008946269.1|	-	0.0026	17.4	0.1	0.0073	16.0	0.0	1.8	1	1	0	1	1	1	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
HTH_36	PF13730.1	gi|568162976|ref|YP_008946269.1|	-	0.0029	17.6	0.0	0.0052	16.8	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_Crp_2	PF13545.1	gi|568162976|ref|YP_008946269.1|	-	0.0033	17.1	0.0	0.0089	15.8	0.0	1.7	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
Rrf2	PF02082.15	gi|568162976|ref|YP_008946269.1|	-	0.0079	16.2	0.0	0.029	14.5	0.0	1.9	2	0	0	2	2	1	1	Transcriptional	regulator
HTH_34	PF13601.1	gi|568162976|ref|YP_008946269.1|	-	0.0094	15.9	0.1	0.043	13.8	0.0	2.1	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
PadR	PF03551.9	gi|568162976|ref|YP_008946269.1|	-	0.011	15.5	0.1	0.1	12.3	0.0	2.6	2	1	1	3	3	3	0	Transcriptional	regulator	PadR-like	family
DUF1221	PF06760.6	gi|568162976|ref|YP_008946269.1|	-	0.017	14.3	0.0	0.068	12.4	0.0	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1221)
HTH_28	PF13518.1	gi|568162976|ref|YP_008946269.1|	-	0.018	15.0	0.0	0.059	13.3	0.0	1.8	2	0	0	2	2	2	0	Helix-turn-helix	domain
AAA_assoc_C	PF09821.4	gi|568162976|ref|YP_008946269.1|	-	0.02	15.1	0.0	0.032	14.4	0.0	1.4	1	0	0	1	1	1	0	C-terminal	AAA-associated	domain
Ribosomal_S19e	PF01090.14	gi|568162976|ref|YP_008946269.1|	-	0.02	14.3	0.0	0.032	13.6	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	protein	S19e
DUF4364	PF14277.1	gi|568162976|ref|YP_008946269.1|	-	0.027	14.0	0.1	0.078	12.5	0.1	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4364)
DUF2250	PF10007.4	gi|568162976|ref|YP_008946269.1|	-	0.027	14.3	0.2	0.055	13.3	0.1	1.6	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
B-block_TFIIIC	PF04182.7	gi|568162976|ref|YP_008946269.1|	-	0.029	14.1	0.7	0.11	12.4	0.0	2.2	2	1	0	2	2	2	0	B-block	binding	subunit	of	TFIIIC
FokI_C	PF02980.11	gi|568162976|ref|YP_008946269.1|	-	0.031	13.9	0.0	0.058	13.0	0.0	1.4	1	0	0	1	1	1	0	Restriction	endonuclease	FokI,	catalytic	domain
HTH_20	PF12840.2	gi|568162976|ref|YP_008946269.1|	-	0.035	13.9	0.0	0.084	12.6	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_IclR	PF09339.5	gi|568162976|ref|YP_008946269.1|	-	0.048	13.2	0.0	0.12	11.9	0.0	1.7	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_11	PF08279.7	gi|568162976|ref|YP_008946269.1|	-	0.051	13.2	0.6	0.18	11.4	0.0	2.2	2	0	0	2	2	2	0	HTH	domain
HxlR	PF01638.12	gi|568162976|ref|YP_008946269.1|	-	0.059	13.0	0.1	0.27	10.9	0.1	2.2	1	1	1	2	2	2	0	HxlR-like	helix-turn-helix
SBP_bac_8	PF13416.1	gi|568162976|ref|YP_008946269.1|	-	0.071	12.8	0.0	0.1	12.2	0.0	1.1	1	0	0	1	1	1	0	Bacterial	extracellular	solute-binding	protein
DUF4393	PF14337.1	gi|568162976|ref|YP_008946269.1|	-	0.08	12.3	0.1	0.3	10.4	0.1	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4393)
Topoisom_bac	PF01131.15	gi|568162976|ref|YP_008946269.1|	-	0.091	11.5	0.1	0.18	10.5	0.0	1.4	1	0	0	1	1	1	0	DNA	topoisomerase
DUF4147	PF13660.1	gi|568162977|ref|YP_008946270.1|	-	8.1e-52	175.7	0.0	1.2e-51	175.1	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4147)
MOFRL	PF05161.8	gi|568162977|ref|YP_008946270.1|	-	5.7e-23	81.0	0.7	1.2e-22	80.0	0.2	1.8	2	0	0	2	2	2	1	MOFRL	family
BPD_transp_1	PF00528.17	gi|568162978|ref|YP_008946272.1|	-	4e-14	52.5	13.5	4e-14	52.5	9.4	2.2	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
TIM	PF00121.13	gi|568162979|ref|YP_008946274.1|	-	1e-24	86.9	0.5	8.4e-19	67.5	0.0	2.0	2	0	0	2	2	2	2	Triosephosphate	isomerase
ThiG	PF05690.9	gi|568162979|ref|YP_008946274.1|	-	1.8e-06	27.2	0.4	2.9e-06	26.5	0.3	1.3	1	0	0	1	1	1	1	Thiazole	biosynthesis	protein	ThiG
Glu_synthase	PF01645.12	gi|568162979|ref|YP_008946274.1|	-	6.4e-06	25.3	0.1	1.2e-05	24.4	0.1	1.3	1	0	0	1	1	1	1	Conserved	region	in	glutamate	synthase
His_biosynth	PF00977.16	gi|568162979|ref|YP_008946274.1|	-	1.1e-05	24.8	0.8	0.0054	16.0	0.1	2.1	2	0	0	2	2	2	2	Histidine	biosynthesis	protein
FMN_dh	PF01070.13	gi|568162979|ref|YP_008946274.1|	-	2.7e-05	23.2	0.1	4e-05	22.6	0.1	1.2	1	0	0	1	1	1	1	FMN-dependent	dehydrogenase
Trp_syntA	PF00290.15	gi|568162979|ref|YP_008946274.1|	-	0.00018	20.1	0.3	0.00038	19.0	0.2	1.5	1	0	0	1	1	1	1	Tryptophan	synthase	alpha	chain
PcrB	PF01884.12	gi|568162979|ref|YP_008946274.1|	-	0.0034	16.6	1.1	0.0034	16.6	0.8	1.6	2	0	0	2	2	2	1	PcrB	family
NMO	PF03060.10	gi|568162979|ref|YP_008946274.1|	-	0.0055	15.9	0.2	0.0093	15.1	0.2	1.3	1	0	0	1	1	1	1	Nitronate	monooxygenase
IGPS	PF00218.16	gi|568162979|ref|YP_008946274.1|	-	0.0086	15.1	0.0	0.014	14.4	0.0	1.3	1	0	0	1	1	1	1	Indole-3-glycerol	phosphate	synthase
G3P_antiterm	PF04309.7	gi|568162979|ref|YP_008946274.1|	-	0.021	13.8	0.2	0.05	12.6	0.2	1.5	1	0	0	1	1	1	0	Glycerol-3-phosphate	responsive	antiterminator
DUF561	PF04481.7	gi|568162979|ref|YP_008946274.1|	-	0.046	12.6	0.0	0.092	11.6	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF561)
DHO_dh	PF01180.16	gi|568162979|ref|YP_008946274.1|	-	0.073	12.0	0.5	0.13	11.2	0.0	1.6	2	0	0	2	2	2	0	Dihydroorotate	dehydrogenase
DUF429	PF04250.8	gi|568162980|ref|YP_008946275.1|	-	8.4e-30	103.5	0.0	9.6e-29	100.1	0.0	1.9	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF429)
E1-E2_ATPase	PF00122.15	gi|568164732|ref|YP_008946276.1|	-	1.1	8.2	15.5	0.016	14.2	1.5	2.3	1	1	1	2	2	2	0	E1-E2	ATPase
DUF4191	PF13829.1	gi|568164732|ref|YP_008946276.1|	-	4.5	6.3	13.2	2.9	6.9	2.9	2.4	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4191)
Na_H_Exchanger	PF00999.16	gi|568164733|ref|YP_008946277.1|	-	1.2e-10	40.4	13.8	1.5e-10	40.1	9.5	1.0	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
Esterase	PF00756.15	gi|568162981|ref|YP_008946278.1|	-	4.3e-14	52.5	0.0	9.4e-14	51.4	0.0	1.6	1	1	0	1	1	1	1	Putative	esterase
Abhydrolase_5	PF12695.2	gi|568162981|ref|YP_008946278.1|	-	0.0023	17.7	0.0	0.0027	17.4	0.0	1.3	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_6	PF12697.2	gi|568162981|ref|YP_008946278.1|	-	0.0094	15.8	0.0	0.012	15.5	0.0	1.2	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_3	PF07859.8	gi|568162981|ref|YP_008946278.1|	-	0.1	12.1	0.0	6.8	6.1	0.0	2.3	2	0	0	2	2	2	0	alpha/beta	hydrolase	fold
Esterase_phd	PF10503.4	gi|568162981|ref|YP_008946278.1|	-	0.12	11.5	0.0	0.17	11.0	0.0	1.2	1	0	0	1	1	1	0	Esterase	PHB	depolymerase
BPD_transp_1	PF00528.17	gi|568162983|ref|YP_008946280.1|	-	5e-09	35.9	19.3	5e-09	35.9	13.4	2.3	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
ABC_tran	PF00005.22	gi|568164734|ref|YP_008946281.1|	-	1.5e-07	31.8	0.1	1.7e-07	31.6	0.1	1.1	1	0	0	1	1	1	1	ABC	transporter
AAA_29	PF13555.1	gi|568164734|ref|YP_008946281.1|	-	7.3e-06	25.4	0.0	8.9e-06	25.1	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_21	PF13304.1	gi|568164734|ref|YP_008946281.1|	-	3.7e-05	23.8	0.3	4.9e-05	23.4	0.2	1.2	1	0	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|568164734|ref|YP_008946281.1|	-	0.00011	21.3	0.1	0.00012	21.3	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_16	PF13191.1	gi|568164734|ref|YP_008946281.1|	-	0.00013	22.0	0.0	0.00013	21.9	0.0	1.1	1	0	0	1	1	1	1	AAA	ATPase	domain
KAP_NTPase	PF07693.9	gi|568164734|ref|YP_008946281.1|	-	0.00054	19.0	0.1	0.00058	18.9	0.0	1.0	1	0	0	1	1	1	1	KAP	family	P-loop	domain
AAA_30	PF13604.1	gi|568164734|ref|YP_008946281.1|	-	0.00096	18.7	0.0	0.001	18.7	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|568164734|ref|YP_008946281.1|	-	0.0011	19.2	0.1	0.0017	18.6	0.1	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_PrkA	PF08298.6	gi|568164734|ref|YP_008946281.1|	-	0.0011	17.6	0.0	0.0013	17.4	0.0	1.1	1	0	0	1	1	1	1	PrkA	AAA	domain
RNA_helicase	PF00910.17	gi|568164734|ref|YP_008946281.1|	-	0.0014	18.8	0.0	0.0019	18.3	0.0	1.2	1	0	0	1	1	1	1	RNA	helicase
AAA_19	PF13245.1	gi|568164734|ref|YP_008946281.1|	-	0.0015	18.2	0.0	0.0018	17.9	0.0	1.1	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_17	PF13207.1	gi|568164734|ref|YP_008946281.1|	-	0.0018	19.1	0.0	0.0024	18.6	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|568164734|ref|YP_008946281.1|	-	0.0019	18.3	0.0	0.0022	18.1	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|568164734|ref|YP_008946281.1|	-	0.0019	17.9	0.1	0.0021	17.8	0.1	1.1	1	0	0	1	1	1	1	Archaeal	ATPase
AAA_10	PF12846.2	gi|568164734|ref|YP_008946281.1|	-	0.002	17.6	0.1	0.0024	17.3	0.0	1.1	1	0	0	1	1	1	1	AAA-like	domain
cobW	PF02492.14	gi|568164734|ref|YP_008946281.1|	-	0.0043	16.5	0.0	0.0052	16.2	0.0	1.1	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_23	PF13476.1	gi|568164734|ref|YP_008946281.1|	-	0.0045	17.3	0.2	0.0069	16.7	0.1	1.3	1	1	0	1	1	1	1	AAA	domain
AAA_24	PF13479.1	gi|568164734|ref|YP_008946281.1|	-	0.0057	16.2	0.1	0.0087	15.6	0.0	1.3	1	1	0	1	1	1	1	AAA	domain
T2SE	PF00437.15	gi|568164734|ref|YP_008946281.1|	-	0.0066	15.3	0.0	0.0066	15.3	0.0	1.1	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
PIF1	PF05970.9	gi|568164734|ref|YP_008946281.1|	-	0.0083	15.1	0.0	0.0097	14.8	0.0	1.0	1	0	0	1	1	1	1	PIF1-like	helicase
MobB	PF03205.9	gi|568164734|ref|YP_008946281.1|	-	0.009	15.7	0.1	0.012	15.2	0.0	1.3	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_15	PF13175.1	gi|568164734|ref|YP_008946281.1|	-	0.0095	15.0	1.2	0.0099	14.9	0.9	1.1	1	0	0	1	1	1	1	AAA	ATPase	domain
ATP_bind_1	PF03029.12	gi|568164734|ref|YP_008946281.1|	-	0.0096	15.4	0.0	0.013	15.0	0.0	1.2	1	0	0	1	1	1	1	Conserved	hypothetical	ATP	binding	protein
MMR_HSR1	PF01926.18	gi|568164734|ref|YP_008946281.1|	-	0.01	15.7	0.1	0.015	15.2	0.1	1.3	1	0	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_25	PF13481.1	gi|568164734|ref|YP_008946281.1|	-	0.011	15.2	0.0	0.012	14.9	0.0	1.1	1	0	0	1	1	1	0	AAA	domain
AAA_5	PF07728.9	gi|568164734|ref|YP_008946281.1|	-	0.011	15.4	0.1	0.015	15.0	0.0	1.3	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_33	PF13671.1	gi|568164734|ref|YP_008946281.1|	-	0.012	15.4	0.0	0.014	15.2	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
Rad17	PF03215.10	gi|568164734|ref|YP_008946281.1|	-	0.013	14.2	0.1	0.013	14.2	0.0	1.1	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
NACHT	PF05729.7	gi|568164734|ref|YP_008946281.1|	-	0.014	15.0	0.0	0.018	14.7	0.0	1.2	1	0	0	1	1	1	0	NACHT	domain
NTPase_1	PF03266.10	gi|568164734|ref|YP_008946281.1|	-	0.014	15.0	0.1	0.02	14.5	0.0	1.2	1	0	0	1	1	1	0	NTPase
ABC_ATPase	PF09818.4	gi|568164734|ref|YP_008946281.1|	-	0.016	13.8	0.0	0.016	13.8	0.0	1.0	1	0	0	1	1	1	0	Predicted	ATPase	of	the	ABC	class
AAA_14	PF13173.1	gi|568164734|ref|YP_008946281.1|	-	0.018	14.9	0.0	0.026	14.4	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
NB-ARC	PF00931.17	gi|568164734|ref|YP_008946281.1|	-	0.018	13.8	0.1	0.021	13.7	0.0	1.1	1	0	0	1	1	1	0	NB-ARC	domain
PRK	PF00485.13	gi|568164734|ref|YP_008946281.1|	-	0.024	14.1	0.0	0.028	13.9	0.0	1.1	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
UPF0079	PF02367.12	gi|568164734|ref|YP_008946281.1|	-	0.025	14.1	0.0	0.029	14.0	0.0	1.2	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
SMC_N	PF02463.14	gi|568164734|ref|YP_008946281.1|	-	0.026	13.7	0.1	0.027	13.6	0.1	1.2	1	0	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
AAA_28	PF13521.1	gi|568164734|ref|YP_008946281.1|	-	0.029	14.3	0.0	0.034	14.1	0.0	1.1	1	0	0	1	1	1	0	AAA	domain
Mg_chelatase	PF01078.16	gi|568164734|ref|YP_008946281.1|	-	0.034	13.3	0.0	0.036	13.2	0.0	1.1	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
DUF87	PF01935.12	gi|568164734|ref|YP_008946281.1|	-	0.038	13.8	0.1	0.044	13.5	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF87
G-alpha	PF00503.15	gi|568164734|ref|YP_008946281.1|	-	0.049	12.3	0.0	0.05	12.2	0.0	1.1	1	0	0	1	1	1	0	G-protein	alpha	subunit
Zeta_toxin	PF06414.7	gi|568164734|ref|YP_008946281.1|	-	0.062	12.3	0.0	0.07	12.2	0.0	1.1	1	0	0	1	1	1	0	Zeta	toxin
FtsK_SpoIIIE	PF01580.13	gi|568164734|ref|YP_008946281.1|	-	0.075	12.5	0.0	0.081	12.3	0.0	1.1	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
Septin	PF00735.13	gi|568164734|ref|YP_008946281.1|	-	0.075	12.0	0.0	0.091	11.7	0.0	1.1	1	0	0	1	1	1	0	Septin
ArgK	PF03308.11	gi|568164734|ref|YP_008946281.1|	-	0.096	11.4	0.0	0.096	11.4	0.0	1.1	1	0	0	1	1	1	0	ArgK	protein
OrfB_Zn_ribbon	PF07282.6	gi|568162984|ref|YP_008946282.1|	-	1.5e-18	66.2	2.4	1.3e-17	63.1	0.1	2.6	3	0	0	3	3	3	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|568162984|ref|YP_008946282.1|	-	8.3e-08	31.9	3.5	1.1e-07	31.5	2.2	1.4	1	1	0	1	1	1	1	Probable	transposase
YfbU	PF03887.9	gi|568162984|ref|YP_008946282.1|	-	0.016	14.7	0.8	0.13	11.8	0.2	2.5	2	1	0	2	2	2	0	YfbU	domain
zf-TFIIB	PF13453.1	gi|568162984|ref|YP_008946282.1|	-	0.091	11.9	1.2	0.2	10.9	0.8	1.5	1	0	0	1	1	1	0	Transcription	factor	zinc-finger
TF_Zn_Ribbon	PF08271.7	gi|568162984|ref|YP_008946282.1|	-	0.094	12.0	1.0	0.18	11.1	0.7	1.4	1	0	0	1	1	1	0	TFIIB	zinc-binding
Integrase_Zn	PF02022.14	gi|568162984|ref|YP_008946282.1|	-	0.6	9.5	2.3	2	7.9	0.0	2.7	2	1	1	3	3	3	0	Integrase	Zinc	binding	domain
ABC_tran	PF00005.22	gi|568162985|ref|YP_008946283.1|	-	3.1e-19	69.6	0.0	4.1e-19	69.2	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|568162985|ref|YP_008946283.1|	-	2.3e-06	27.7	0.0	3.4e-06	27.2	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|568162985|ref|YP_008946283.1|	-	5.7e-05	22.4	0.1	6.5e-05	22.2	0.0	1.2	1	0	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|568162985|ref|YP_008946283.1|	-	0.0053	15.8	1.0	0.0086	15.1	0.7	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
STAS	PF01740.16	gi|568162985|ref|YP_008946283.1|	-	0.014	14.8	0.2	0.028	13.8	0.1	1.5	1	1	0	1	1	1	0	STAS	domain
DUF3619	PF12279.3	gi|568162985|ref|YP_008946283.1|	-	0.11	12.5	0.1	0.19	11.8	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3619)
NUDIX	PF00293.23	gi|568162986|ref|YP_008946284.1|	-	2.2e-09	37.0	0.0	2.7e-09	36.7	0.0	1.2	1	0	0	1	1	1	1	NUDIX	domain
Lyase_1	PF00206.15	gi|568162987|ref|YP_008946285.1|	-	7.6e-101	337.3	0.0	9.8e-101	337.0	0.0	1.1	1	0	0	1	1	1	1	Lyase
FumaraseC_C	PF10415.4	gi|568162987|ref|YP_008946285.1|	-	2.4e-14	53.0	0.4	6.9e-14	51.6	0.0	2.0	2	0	0	2	2	2	1	Fumarase	C	C-terminus
RuvA_C	PF07499.8	gi|568162987|ref|YP_008946285.1|	-	0.038	14.1	0.0	0.63	10.2	0.0	2.8	3	0	0	3	3	3	0	RuvA,	C-terminal	domain
P4Ha_N	PF08336.6	gi|568162987|ref|YP_008946285.1|	-	0.12	12.1	0.2	5.3	6.8	0.0	2.5	1	1	1	2	2	2	0	Prolyl	4-Hydroxylase	alpha-subunit,	N-terminal	region
Lactamase_B	PF00753.22	gi|568162988|ref|YP_008946286.1|	-	5.6e-29	101.1	0.9	6.3e-29	101.0	0.6	1.0	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|568162988|ref|YP_008946286.1|	-	1.7e-08	34.2	0.1	2e-08	33.9	0.0	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|568162988|ref|YP_008946286.1|	-	0.024	14.3	0.0	0.029	14.1	0.0	1.3	1	1	0	1	1	1	0	Beta-lactamase	superfamily	domain
Glyco_tranf_2_3	PF13641.1	gi|568164735|ref|YP_008946287.1|	-	2.6e-18	66.6	0.0	3.6e-18	66.2	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glycos_transf_2	PF00535.21	gi|568164735|ref|YP_008946287.1|	-	2.1e-17	63.3	0.1	3.4e-17	62.6	0.1	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.1	gi|568164735|ref|YP_008946287.1|	-	1.6e-13	50.3	0.0	3e-13	49.4	0.0	1.4	1	1	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_trans_2_3	PF13632.1	gi|568164735|ref|YP_008946287.1|	-	8.4e-13	48.4	0.1	1.7e-12	47.4	0.1	1.6	1	1	0	1	1	1	1	Glycosyl	transferase	family	group	2
Chitin_synth_2	PF03142.10	gi|568164735|ref|YP_008946287.1|	-	0.0092	14.4	0.6	0.33	9.2	0.4	3.0	2	1	0	2	2	2	1	Chitin	synthase
Glyco_tranf_2_2	PF10111.4	gi|568164735|ref|YP_008946287.1|	-	0.021	13.9	0.0	0.032	13.2	0.0	1.2	1	0	0	1	1	1	0	Glycosyltransferase	like	family	2
MMPL	PF03176.10	gi|568162989|ref|YP_008946288.1|	-	4.7e-50	170.1	25.3	1.4e-27	96.3	8.1	2.2	2	0	0	2	2	2	2	MMPL	family
Helicase_RecD	PF05127.9	gi|568162990|ref|YP_008946289.1|	-	7.6e-48	162.4	0.0	1.2e-47	161.7	0.0	1.3	1	0	0	1	1	1	1	Helicase
GNAT_acetyltr_2	PF13718.1	gi|568162990|ref|YP_008946289.1|	-	6.5e-39	133.2	0.0	7.8e-38	129.7	0.0	2.2	1	1	0	1	1	1	1	GNAT	acetyltransferase	2
DUF1726	PF08351.6	gi|568162990|ref|YP_008946289.1|	-	6.5e-22	77.0	0.0	1.7e-21	75.7	0.0	1.7	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1726)
Acetyltransf_1	PF00583.19	gi|568162990|ref|YP_008946289.1|	-	3.3e-08	33.4	0.1	1e-07	31.9	0.0	1.9	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|568162990|ref|YP_008946289.1|	-	8.1e-07	29.1	0.0	3.2e-06	27.2	0.0	2.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
tRNA_bind_2	PF13725.1	gi|568162990|ref|YP_008946289.1|	-	9.3e-06	25.6	0.0	5.2e-05	23.2	0.0	2.1	1	1	1	2	2	2	1	Possible	tRNA	binding	domain
AAA_22	PF13401.1	gi|568162990|ref|YP_008946289.1|	-	0.00016	21.8	0.3	0.0036	17.4	0.0	2.8	2	1	1	3	3	3	1	AAA	domain
AAA_30	PF13604.1	gi|568162990|ref|YP_008946289.1|	-	0.03	13.9	0.0	0.29	10.6	0.0	2.4	1	1	1	2	2	2	0	AAA	domain
DUF95	PF01944.12	gi|568162991|ref|YP_008946290.1|	-	4e-13	49.3	14.0	4e-13	49.3	9.7	2.3	2	1	0	2	2	2	1	Integral	membrane	protein	DUF95
UPF0147	PF03685.8	gi|568162991|ref|YP_008946290.1|	-	0.15	11.9	0.1	0.34	10.8	0.0	1.6	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0147)
Exo_endo_phos	PF03372.18	gi|568162992|ref|YP_008946291.1|	-	2.9e-14	53.6	0.0	3.5e-14	53.3	0.0	1.1	1	0	0	1	1	1	1	Endonuclease/Exonuclease/phosphatase	family
Exo_endo_phos_2	PF14529.1	gi|568162992|ref|YP_008946291.1|	-	1.3e-10	40.9	0.0	2.6e-10	39.9	0.0	1.5	2	0	0	2	2	2	1	Endonuclease-reverse	transcriptase
TusA	PF01206.12	gi|568162993|ref|YP_008946292.1|	-	1.6e-14	53.2	0.4	1.9e-14	52.9	0.3	1.1	1	0	0	1	1	1	1	Sulfurtransferase	TusA
PurS	PF02700.9	gi|568162993|ref|YP_008946292.1|	-	0.043	13.7	0.1	0.059	13.3	0.0	1.2	1	0	0	1	1	1	0	Phosphoribosylformylglycinamidine	(FGAM)	synthase
Bac_small_YrzI	PF09501.5	gi|568162993|ref|YP_008946292.1|	-	0.053	13.4	0.7	0.089	12.7	0.5	1.3	1	0	0	1	1	1	0	Probable	sporulation	protein	(Bac_small_yrzI)
DUF1641	PF07849.6	gi|568162994|ref|YP_008946293.1|	-	7e-12	44.7	0.4	2.1e-11	43.2	0.0	2.0	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1641)
DUF1542	PF07564.6	gi|568162994|ref|YP_008946293.1|	-	0.015	15.2	0.8	0.96	9.5	0.2	2.5	2	0	0	2	2	2	0	Domain	of	Unknown	Function	(DUF1542)
GED	PF02212.13	gi|568162994|ref|YP_008946293.1|	-	0.11	12.4	5.1	7	6.6	0.2	2.9	2	1	0	2	2	2	0	Dynamin	GTPase	effector	domain
FliT	PF05400.8	gi|568162994|ref|YP_008946293.1|	-	0.12	12.7	2.9	5	7.5	0.3	3.5	2	2	1	3	3	3	0	Flagellar	protein	FliT
MgtE_N	PF03448.12	gi|568162994|ref|YP_008946293.1|	-	0.2	11.9	16.2	1.2	9.4	1.5	4.2	1	1	1	3	3	3	0	MgtE	intracellular	N	domain
DUF4511	PF14974.1	gi|568162994|ref|YP_008946293.1|	-	0.23	11.2	9.0	2	8.1	0.2	4.2	2	2	2	4	4	4	0	Domain	of	unknown	function	(DUF4511)
AAA_13	PF13166.1	gi|568162994|ref|YP_008946293.1|	-	1.2	7.5	5.5	0.59	8.5	1.7	1.9	1	1	0	2	2	2	0	AAA	domain
DUF2785	PF10978.3	gi|568164736|ref|YP_008946294.1|	-	0.014	14.8	0.9	2.5	7.5	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2785)
DUF2654	PF10849.3	gi|568164736|ref|YP_008946294.1|	-	0.033	13.9	0.1	0.072	12.8	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2654)
Tox-MPTase4	PF15640.1	gi|568164736|ref|YP_008946294.1|	-	0.11	12.1	1.8	0.32	10.6	0.2	2.0	2	0	0	2	2	2	0	Metallopeptidase	toxin	4
TrmB	PF01978.14	gi|568162995|ref|YP_008946295.1|	-	8.6e-13	47.7	0.0	1.2e-12	47.3	0.0	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|568162995|ref|YP_008946295.1|	-	1.5e-10	40.5	0.0	2.5e-10	39.8	0.0	1.4	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.17	gi|568162995|ref|YP_008946295.1|	-	1.7e-07	30.8	0.0	2.5e-07	30.2	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.1	gi|568162995|ref|YP_008946295.1|	-	1.7e-06	27.3	0.0	2.9e-06	26.5	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_27	PF13463.1	gi|568162995|ref|YP_008946295.1|	-	1.4e-05	25.3	0.0	2.2e-05	24.6	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
TFIIE_alpha	PF02002.12	gi|568162995|ref|YP_008946295.1|	-	4.6e-05	22.8	0.0	5.5e-05	22.6	0.0	1.2	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HTH_IclR	PF09339.5	gi|568162995|ref|YP_008946295.1|	-	8e-05	22.1	0.0	0.00013	21.4	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_34	PF13601.1	gi|568162995|ref|YP_008946295.1|	-	0.00011	22.1	0.0	0.00016	21.6	0.0	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
Mga	PF05043.8	gi|568162995|ref|YP_008946295.1|	-	0.00035	20.7	0.0	0.00053	20.2	0.0	1.3	1	0	0	1	1	1	1	Mga	helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|568162995|ref|YP_008946295.1|	-	0.0026	17.6	0.0	0.0041	17.0	0.0	1.5	1	1	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DUF4423	PF14394.1	gi|568162995|ref|YP_008946295.1|	-	0.0042	16.6	0.0	0.0053	16.3	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
HTH_36	PF13730.1	gi|568162995|ref|YP_008946295.1|	-	0.007	16.4	0.0	0.011	15.8	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|568162995|ref|YP_008946295.1|	-	0.0081	15.8	0.0	0.013	15.1	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
RPA_C	PF08784.6	gi|568162995|ref|YP_008946295.1|	-	0.0081	16.5	0.0	0.011	16.1	0.0	1.2	1	0	0	1	1	1	1	Replication	protein	A	C	terminal
GntR	PF00392.16	gi|568162995|ref|YP_008946295.1|	-	0.0083	15.5	0.0	0.028	13.8	0.0	1.9	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	gntR	family
HTH_20	PF12840.2	gi|568162995|ref|YP_008946295.1|	-	0.01	15.6	0.0	0.014	15.1	0.0	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|568162995|ref|YP_008946295.1|	-	0.015	14.8	0.0	0.027	14.0	0.0	1.4	1	0	0	1	1	1	0	HTH	domain
HTH_Crp_2	PF13545.1	gi|568162995|ref|YP_008946295.1|	-	0.045	13.5	0.0	0.073	12.8	0.0	1.4	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
RP-C	PF03428.8	gi|568162995|ref|YP_008946295.1|	-	0.047	13.1	0.1	1.8	7.9	0.1	2.1	1	1	0	1	1	1	0	Replication	protein	C	N-terminal	domain
Epimerase	PF01370.16	gi|568162996|ref|YP_008946296.1|	-	1.5e-09	37.6	0.1	2e-09	37.2	0.1	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|568162996|ref|YP_008946296.1|	-	4.5e-09	35.6	0.0	5.8e-09	35.2	0.0	1.2	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Saccharop_dh	PF03435.13	gi|568162996|ref|YP_008946296.1|	-	1.3e-07	30.9	0.0	2e-07	30.3	0.0	1.2	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
NmrA	PF05368.8	gi|568162996|ref|YP_008946296.1|	-	0.0034	16.6	0.0	0.006	15.8	0.0	1.4	1	0	0	1	1	1	1	NmrA-like	family
UN_NPL4	PF11543.3	gi|568162996|ref|YP_008946296.1|	-	0.069	13.4	0.1	0.18	12.0	0.1	1.7	1	0	0	1	1	1	0	Nuclear	pore	localisation	protein	NPL4
Aldo_ket_red	PF00248.16	gi|568162997|ref|YP_008946297.1|	-	2e-71	240.1	0.1	2.3e-71	239.9	0.0	1.0	1	0	0	1	1	1	1	Aldo/keto	reductase	family
Pyr_redox_2	PF07992.9	gi|568162998|ref|YP_008946298.1|	-	9.3e-29	100.7	6.1	1.8e-17	63.8	0.0	4.1	2	1	1	3	3	3	3	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|568162998|ref|YP_008946298.1|	-	6.6e-19	68.1	5.7	1.7e-13	50.8	0.0	4.0	6	0	0	6	6	4	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|568162998|ref|YP_008946298.1|	-	2.9e-15	56.2	0.0	8.1e-15	54.8	0.0	1.8	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
GIDA	PF01134.17	gi|568162998|ref|YP_008946298.1|	-	8.2e-14	51.2	5.5	3.2e-06	26.2	0.7	4.0	3	1	0	3	3	3	3	Glucose	inhibited	division	protein	A
NAD_binding_8	PF13450.1	gi|568162998|ref|YP_008946298.1|	-	4.6e-10	39.3	3.5	7e-05	22.7	0.1	2.9	3	0	0	3	3	2	2	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.19	gi|568162998|ref|YP_008946298.1|	-	6.3e-10	38.4	7.0	1.9e-06	26.9	0.1	3.5	4	0	0	4	4	4	2	FAD	binding	domain
Pyr_redox_3	PF13738.1	gi|568162998|ref|YP_008946298.1|	-	4.1e-09	36.8	0.0	4.3e-07	30.2	0.0	3.0	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|568162998|ref|YP_008946298.1|	-	1.3e-08	33.7	1.6	5.9e-06	25.0	0.0	3.6	4	0	0	4	4	4	1	HI0933-like	protein
FAD_oxidored	PF12831.2	gi|568162998|ref|YP_008946298.1|	-	9.9e-07	28.1	1.3	3.2e-06	26.4	0.0	2.0	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
FAD_binding_3	PF01494.14	gi|568162998|ref|YP_008946298.1|	-	6.3e-06	25.4	1.8	0.05	12.6	0.1	2.3	2	0	0	2	2	2	2	FAD	binding	domain
DAO	PF01266.19	gi|568162998|ref|YP_008946298.1|	-	9.7e-06	24.7	4.5	0.11	11.3	0.0	3.8	4	0	0	4	4	4	2	FAD	dependent	oxidoreductase
Amino_oxidase	PF01593.19	gi|568162998|ref|YP_008946298.1|	-	0.0013	17.8	0.0	2	7.3	0.0	3.1	3	0	0	3	3	3	1	Flavin	containing	amine	oxidoreductase
UDPG_MGDP_dh_N	PF03721.9	gi|568162998|ref|YP_008946298.1|	-	0.0033	16.8	2.2	0.077	12.3	0.0	3.4	4	0	0	4	4	4	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Thi4	PF01946.12	gi|568162998|ref|YP_008946298.1|	-	0.0089	15.1	0.2	0.15	11.1	0.0	2.5	2	0	0	2	2	2	1	Thi4	family
AlaDh_PNT_C	PF01262.16	gi|568162998|ref|YP_008946298.1|	-	0.01	15.4	0.2	6.2	6.3	0.0	3.3	3	0	0	3	3	3	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
Lycopene_cycl	PF05834.7	gi|568162998|ref|YP_008946298.1|	-	0.064	12.1	1.6	3.2	6.5	0.1	2.9	2	1	1	3	3	3	0	Lycopene	cyclase	protein
Trp_halogenase	PF04820.9	gi|568162998|ref|YP_008946298.1|	-	0.14	10.7	0.6	4.4	5.8	0.0	2.2	2	0	0	2	2	2	0	Tryptophan	halogenase
NAD_binding_9	PF13454.1	gi|568162998|ref|YP_008946298.1|	-	0.68	9.6	2.4	79	2.9	0.0	3.7	4	0	0	4	4	4	0	FAD-NAD(P)-binding
ThiC	PF01964.13	gi|568162999|ref|YP_008946299.1|	-	3.9e-169	562.6	0.0	4.6e-169	562.4	0.0	1.0	1	0	0	1	1	1	1	ThiC	family
GTP_EFTU_D2	PF03144.20	gi|568163000|ref|YP_008946300.1|	-	0.0013	18.8	0.2	0.027	14.5	0.2	2.5	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
Arc_PepC_II	PF06847.6	gi|568163001|ref|YP_008946301.1|	-	6.2e-16	58.6	0.1	6.2e-16	58.6	0.1	2.0	2	0	0	2	2	2	1	Archaeal	Peptidase	A24	C-terminus	Type	II
Peptidase_A24	PF01478.13	gi|568163001|ref|YP_008946301.1|	-	1.1e-07	31.9	7.3	1.1e-07	31.9	5.1	2.2	2	1	0	2	2	2	1	Type	IV	leader	peptidase	family
DUF973	PF06157.6	gi|568164737|ref|YP_008946302.1|	-	9.3e-51	172.4	30.3	2.3e-49	167.9	21.0	2.0	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
Creatininase	PF02633.9	gi|568163002|ref|YP_008946303.1|	-	1.3e-47	161.9	0.0	1.5e-47	161.6	0.0	1.0	1	0	0	1	1	1	1	Creatinine	amidohydrolase
DUF2101	PF09874.4	gi|568163002|ref|YP_008946303.1|	-	0.046	13.1	0.7	0.066	12.6	0.5	1.2	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2101)
CitMHS	PF03600.11	gi|568163003|ref|YP_008946304.1|	-	8.4e-36	123.2	36.0	7.7e-33	113.5	20.8	2.1	1	1	1	2	2	2	2	Citrate	transporter
ArsB	PF02040.10	gi|568163003|ref|YP_008946304.1|	-	1.2e-12	47.5	36.9	1.5e-12	47.2	25.6	1.2	1	0	0	1	1	1	1	Arsenical	pump	membrane	protein
Ecm33	PF12454.3	gi|568163003|ref|YP_008946304.1|	-	0.12	12.2	0.2	0.28	11.0	0.2	1.6	1	0	0	1	1	1	0	GPI-anchored	cell	wall	organization	protein
MFS_1	PF07690.11	gi|568163004|ref|YP_008946305.1|	-	1.7e-19	69.7	27.7	1.2e-12	47.2	11.1	2.0	1	1	0	2	2	2	2	Major	Facilitator	Superfamily
4HBT	PF03061.17	gi|568163005|ref|YP_008946306.1|	-	3.7e-21	75.0	0.1	1.9e-10	40.7	0.0	2.2	2	0	0	2	2	2	2	Thioesterase	superfamily
4HBT_2	PF13279.1	gi|568163005|ref|YP_008946306.1|	-	2.4e-07	31.2	0.0	0.0098	16.3	0.0	2.2	1	1	0	2	2	2	2	Thioesterase-like	superfamily
Gag_p10	PF02337.12	gi|568163006|ref|YP_008946307.1|	-	0.067	12.9	0.0	0.86	9.3	0.0	2.3	3	0	0	3	3	3	0	Retroviral	GAG	p10	protein
AAA_10	PF12846.2	gi|568163007|ref|YP_008946308.1|	-	7.7e-21	74.8	0.2	8.7e-14	51.6	0.0	2.2	2	0	0	2	2	2	2	AAA-like	domain
DUF87	PF01935.12	gi|568163007|ref|YP_008946308.1|	-	8.7e-16	58.4	4.8	3.2e-15	56.5	2.3	2.5	2	1	0	2	2	2	1	Domain	of	unknown	function	DUF87
DUF853	PF05872.7	gi|568163007|ref|YP_008946308.1|	-	2.1e-08	33.0	0.0	0.003	15.9	0.0	2.1	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
TrwB_AAD_bind	PF10412.4	gi|568163007|ref|YP_008946308.1|	-	4e-06	25.7	0.0	1.3e-05	24.0	0.0	1.7	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA	PF00004.24	gi|568163007|ref|YP_008946308.1|	-	3.3e-05	24.0	0.5	0.012	15.7	0.1	2.5	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.1	gi|568163007|ref|YP_008946308.1|	-	0.00019	21.5	0.0	0.29	11.2	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|568163007|ref|YP_008946308.1|	-	0.00029	20.3	0.0	0.0025	17.3	0.0	2.0	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
Zot	PF05707.7	gi|568163007|ref|YP_008946308.1|	-	0.0047	16.4	0.3	0.025	14.0	0.0	2.0	2	0	0	2	2	2	1	Zonular	occludens	toxin	(Zot)
ResIII	PF04851.10	gi|568163007|ref|YP_008946308.1|	-	0.0098	15.7	0.1	4.3	7.1	0.0	2.3	2	0	0	2	2	2	2	Type	III	restriction	enzyme,	res	subunit
Miro	PF08477.8	gi|568163007|ref|YP_008946308.1|	-	0.099	13.1	0.0	0.23	11.9	0.0	1.6	1	0	0	1	1	1	0	Miro-like	protein
AAA_23	PF13476.1	gi|568163007|ref|YP_008946308.1|	-	1.9	8.7	5.7	12	6.0	3.9	2.2	1	1	0	1	1	1	0	AAA	domain
NurA	PF09376.5	gi|568163008|ref|YP_008946309.1|	-	6.8e-30	104.3	0.5	8.2e-30	104.0	0.3	1.1	1	0	0	1	1	1	1	NurA	domain
Pyr_redox_2	PF07992.9	gi|568163009|ref|YP_008946310.1|	-	1e-23	84.2	3.3	1.2e-22	80.7	2.3	3.3	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|568163009|ref|YP_008946310.1|	-	2.2e-18	66.2	0.0	5.1e-18	65.1	0.0	1.6	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.22	gi|568163009|ref|YP_008946310.1|	-	8.2e-13	48.5	12.7	1.2e-11	44.8	1.2	4.0	4	0	0	4	4	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|568163009|ref|YP_008946310.1|	-	2.8e-11	43.8	0.0	1.7e-06	28.2	0.0	3.1	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|568163009|ref|YP_008946310.1|	-	6.7e-08	31.8	2.1	0.0019	17.1	0.4	4.0	3	1	1	4	4	4	2	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|568163009|ref|YP_008946310.1|	-	7.8e-07	29.0	0.2	0.053	13.5	0.0	2.8	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.9	gi|568163009|ref|YP_008946310.1|	-	3.6e-05	22.4	0.3	0.054	11.9	0.0	2.5	2	0	0	2	2	2	2	HI0933-like	protein
GIDA	PF01134.17	gi|568163009|ref|YP_008946310.1|	-	4.3e-05	22.5	0.1	0.071	11.9	0.0	2.4	2	0	0	2	2	2	2	Glucose	inhibited	division	protein	A
NAD_binding_7	PF13241.1	gi|568163009|ref|YP_008946310.1|	-	0.00075	19.7	0.2	0.07	13.3	0.1	2.5	2	0	0	2	2	2	1	Putative	NAD(P)-binding
FAD_binding_2	PF00890.19	gi|568163009|ref|YP_008946310.1|	-	0.001	17.9	1.9	0.31	9.8	0.0	2.6	3	0	0	3	3	3	2	FAD	binding	domain
Lycopene_cycl	PF05834.7	gi|568163009|ref|YP_008946310.1|	-	0.004	16.1	0.3	0.16	10.8	0.0	2.3	2	0	0	2	2	2	1	Lycopene	cyclase	protein
NAD_binding_9	PF13454.1	gi|568163009|ref|YP_008946310.1|	-	0.0069	16.1	2.7	3.3	7.4	0.0	3.0	2	1	1	3	3	3	2	FAD-NAD(P)-binding
TrkA_N	PF02254.13	gi|568163009|ref|YP_008946310.1|	-	0.018	15.0	0.9	0.16	11.9	0.2	2.7	3	0	0	3	3	3	0	TrkA-N	domain
K_oxygenase	PF13434.1	gi|568163009|ref|YP_008946310.1|	-	0.021	13.7	0.0	0.053	12.4	0.0	1.6	2	0	0	2	2	2	0	L-lysine	6-monooxygenase	(NADPH-requiring)
3HCDH_N	PF02737.13	gi|568163009|ref|YP_008946310.1|	-	0.044	13.4	0.2	0.082	12.5	0.1	1.5	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Shikimate_DH	PF01488.15	gi|568163009|ref|YP_008946310.1|	-	0.052	13.6	1.3	1.3	9.1	0.1	3.3	4	0	0	4	4	4	0	Shikimate	/	quinate	5-dehydrogenase
F420_oxidored	PF03807.12	gi|568163009|ref|YP_008946310.1|	-	0.13	12.7	0.8	0.31	11.4	0.1	2.0	2	0	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
FAD_binding_3	PF01494.14	gi|568163009|ref|YP_008946310.1|	-	0.15	11.1	3.0	0.36	9.8	0.2	2.1	2	0	0	2	2	2	0	FAD	binding	domain
Trp_halogenase	PF04820.9	gi|568163009|ref|YP_008946310.1|	-	0.15	10.6	0.2	0.35	9.4	0.0	1.6	2	0	0	2	2	2	0	Tryptophan	halogenase
HSCB_C	PF07743.8	gi|568163010|ref|YP_008946311.1|	-	0.0096	16.3	0.4	0.016	15.6	0.3	1.3	1	0	0	1	1	1	1	HSCB	C-terminal	oligomerisation	domain
ALMT	PF11744.3	gi|568163010|ref|YP_008946311.1|	-	0.067	11.8	0.2	0.11	11.1	0.1	1.2	1	0	0	1	1	1	0	Aluminium	activated	malate	transporter
MOZART1	PF12554.3	gi|568163010|ref|YP_008946311.1|	-	0.16	11.4	0.4	0.3	10.5	0.3	1.4	1	0	0	1	1	1	0	Mitotic-spindle	organizing	gamma-tubulin	ring	associated
bact-PGI_C	PF10432.4	gi|568163011|ref|YP_008946312.1|	-	2.6e-32	111.6	0.2	5.1e-32	110.7	0.1	1.5	1	0	0	1	1	1	1	Bacterial	phospho-glucose	isomerase	C-terminal	region
SIS	PF01380.17	gi|568163011|ref|YP_008946312.1|	-	5.2e-07	29.3	0.7	3.5e-06	26.6	0.2	2.3	2	1	0	2	2	2	1	SIS	domain
PK_C	PF02887.11	gi|568163011|ref|YP_008946312.1|	-	0.014	14.9	0.6	0.32	10.5	0.0	2.5	1	1	1	2	2	2	0	Pyruvate	kinase,	alpha/beta	domain
SIS_2	PF13580.1	gi|568163011|ref|YP_008946312.1|	-	0.051	13.2	0.1	0.27	10.9	0.0	2.0	2	0	0	2	2	2	0	SIS	domain
tRNA-synt_1e	PF01406.14	gi|568163012|ref|YP_008946313.1|	-	8.5e-124	412.5	0.2	1.3e-123	411.9	0.1	1.3	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1g	PF09334.6	gi|568163012|ref|YP_008946313.1|	-	1.7e-18	66.4	2.4	3e-10	39.3	0.4	2.2	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(M)
DALR_2	PF09190.6	gi|568163012|ref|YP_008946313.1|	-	3e-07	30.5	0.9	1.7e-05	24.9	0.3	2.9	3	0	0	3	3	3	1	DALR	domain
tRNA-synt_1	PF00133.17	gi|568163012|ref|YP_008946313.1|	-	3.2e-06	25.4	0.7	0.0015	16.6	0.0	3.0	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1f	PF01921.13	gi|568163012|ref|YP_008946313.1|	-	5.6e-05	21.9	0.3	0.00022	20.0	0.0	2.0	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(K)
tRNA-synt_1c	PF00749.16	gi|568163012|ref|YP_008946313.1|	-	0.0067	15.1	2.3	0.035	12.7	0.1	2.9	3	0	0	3	3	3	1	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
MutS_III	PF05192.13	gi|568163012|ref|YP_008946313.1|	-	0.12	12.0	0.0	1.1	9.0	0.0	2.2	1	1	0	1	1	1	0	MutS	domain	III
Fib_alpha	PF08702.5	gi|568163012|ref|YP_008946313.1|	-	0.26	11.3	1.8	14	5.7	0.5	2.3	2	0	0	2	2	2	0	Fibrinogen	alpha/beta	chain	family
RRF	PF01765.14	gi|568163012|ref|YP_008946313.1|	-	0.81	9.1	3.9	2.5	7.5	0.5	2.2	2	0	0	2	2	2	0	Ribosome	recycling	factor
NUDIX	PF00293.23	gi|568163013|ref|YP_008946314.1|	-	7.2e-20	70.9	0.0	9.4e-20	70.6	0.0	1.1	1	0	0	1	1	1	1	NUDIX	domain
ELFV_dehydrog	PF00208.16	gi|568163014|ref|YP_008946316.1|	-	4.4e-67	226.2	4.1	6.4e-67	225.6	2.8	1.3	1	0	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
ELFV_dehydrog_N	PF02812.13	gi|568163014|ref|YP_008946316.1|	-	1.6e-50	170.1	0.0	3.1e-50	169.1	0.0	1.5	1	0	0	1	1	1	1	Glu/Leu/Phe/Val	dehydrogenase,	dimerisation	domain
2-Hacid_dh_C	PF02826.14	gi|568163014|ref|YP_008946316.1|	-	0.0023	17.1	0.3	0.0041	16.2	0.2	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Bac_GDH	PF05088.7	gi|568163014|ref|YP_008946316.1|	-	0.011	13.1	0.1	0.015	12.7	0.1	1.1	1	0	0	1	1	1	0	Bacterial	NAD-glutamate	dehydrogenase
AlaDh_PNT_C	PF01262.16	gi|568163014|ref|YP_008946316.1|	-	0.019	14.5	1.5	0.019	14.5	0.1	1.8	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
AdoHcyase_NAD	PF00670.16	gi|568163014|ref|YP_008946316.1|	-	0.065	13.0	1.0	0.17	11.7	0.7	1.7	1	1	0	1	1	1	0	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
DUF131	PF01998.12	gi|568163015|ref|YP_008946317.1|	-	5.7e-21	73.6	5.4	5.7e-21	73.6	3.7	2.0	1	1	1	2	2	2	1	Protein	of	unknown	function	DUF131
Neurensin	PF14927.1	gi|568163015|ref|YP_008946317.1|	-	0.0017	17.7	2.5	0.18	11.1	0.0	2.0	2	0	0	2	2	2	1	Neurensin
DUF4097	PF13349.1	gi|568163015|ref|YP_008946317.1|	-	0.0025	17.3	0.6	0.0025	17.3	0.4	2.1	2	0	0	2	2	1	1	Domain	of	unknown	function	(DUF4097)
MpPF26	PF07666.6	gi|568163015|ref|YP_008946317.1|	-	0.0035	17.2	5.8	0.0047	16.8	4.0	1.2	1	1	0	1	1	1	1	M	penetrans	paralogue	family	26
DUF2899	PF11449.3	gi|568163015|ref|YP_008946317.1|	-	0.01	15.0	2.0	0.013	14.6	1.4	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2899)
Cytochrom_B_N_2	PF13631.1	gi|568163015|ref|YP_008946317.1|	-	0.011	15.5	1.5	0.059	13.1	0.8	1.9	1	1	0	1	1	1	0	Cytochrome	b(N-terminal)/b6/petB
OAD_gamma	PF04277.8	gi|568163015|ref|YP_008946317.1|	-	0.011	16.0	0.1	0.011	16.0	0.1	2.1	2	0	0	2	2	1	0	Oxaloacetate	decarboxylase,	gamma	chain
PIRT	PF15099.1	gi|568163015|ref|YP_008946317.1|	-	0.011	14.9	0.0	0.011	14.9	0.0	2.1	2	0	0	2	2	2	0	Phosphoinositide-interacting	protein	family
EcsB	PF05975.7	gi|568163015|ref|YP_008946317.1|	-	0.018	13.5	1.3	0.024	13.1	0.9	1.0	1	0	0	1	1	1	0	Bacterial	ABC	transporter	protein	EcsB
5TM-5TMR_LYT	PF07694.7	gi|568163015|ref|YP_008946317.1|	-	0.024	13.9	6.9	0.031	13.6	4.8	1.1	1	0	0	1	1	1	0	5TMR	of	5TMR-LYT
DUF4190	PF13828.1	gi|568163015|ref|YP_008946317.1|	-	0.024	14.1	13.3	0.21	11.1	0.1	2.9	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4190)
Ni_hydr_CYTB	PF01292.15	gi|568163015|ref|YP_008946317.1|	-	0.032	13.6	0.1	0.04	13.3	0.1	1.1	1	0	0	1	1	1	0	Prokaryotic	cytochrome	b561
COPI_assoc	PF08507.5	gi|568163015|ref|YP_008946317.1|	-	0.033	13.8	0.2	0.033	13.8	0.2	2.1	1	1	1	2	2	2	0	COPI	associated	protein
Baculo_11_kDa	PF06143.6	gi|568163015|ref|YP_008946317.1|	-	0.034	13.5	6.6	0.76	9.1	0.0	2.1	2	0	0	2	2	2	0	Baculovirus	11	kDa	family
Cytochrom_B_N	PF00033.14	gi|568163015|ref|YP_008946317.1|	-	0.04	13.2	0.3	0.082	12.2	0.2	1.4	1	1	0	1	1	1	0	Cytochrome	b(N-terminal)/b6/petB
ODV-E18	PF10717.4	gi|568163015|ref|YP_008946317.1|	-	0.043	13.2	6.5	0.75	9.2	0.1	2.1	2	0	0	2	2	2	0	Occlusion-derived	virus	envelope	protein	ODV-E18
AgrB	PF04647.10	gi|568163015|ref|YP_008946317.1|	-	0.045	12.8	4.4	0.059	12.4	3.0	1.2	1	0	0	1	1	1	0	Accessory	gene	regulator	B
Yip1	PF04893.12	gi|568163015|ref|YP_008946317.1|	-	0.054	12.9	4.7	0.12	11.8	3.3	1.6	1	1	0	1	1	1	0	Yip1	domain
GRP	PF07172.6	gi|568163015|ref|YP_008946317.1|	-	0.057	13.9	3.1	0.17	12.3	0.0	2.0	2	0	0	2	2	2	0	Glycine	rich	protein	family
7tm_1	PF00001.16	gi|568163015|ref|YP_008946317.1|	-	0.057	12.5	0.3	0.066	12.3	0.2	1.1	1	0	0	1	1	1	0	7	transmembrane	receptor	(rhodopsin	family)
IncA	PF04156.9	gi|568163015|ref|YP_008946317.1|	-	0.058	12.9	6.0	0.14	11.7	0.0	2.1	2	0	0	2	2	2	0	IncA	protein
TMEM51	PF15345.1	gi|568163015|ref|YP_008946317.1|	-	0.069	12.8	4.4	0.12	12.0	2.9	1.5	1	1	0	1	1	1	0	Transmembrane	protein	51
EphA2_TM	PF14575.1	gi|568163015|ref|YP_008946317.1|	-	0.082	13.3	0.1	0.082	13.3	0.0	2.1	2	0	0	2	2	2	0	Ephrin	type-A	receptor	2	transmembrane	domain
Tic20	PF09685.5	gi|568163015|ref|YP_008946317.1|	-	0.11	12.4	6.7	1.6	8.7	0.0	2.1	2	0	0	2	2	2	0	Tic20-like	protein
Sigma_reg_N	PF13800.1	gi|568163015|ref|YP_008946317.1|	-	0.22	11.5	7.0	1.6	8.8	0.1	2.1	2	0	0	2	2	2	0	Sigma	factor	regulator	N-terminal
MatE	PF01554.13	gi|568163015|ref|YP_008946317.1|	-	0.34	10.5	6.7	0.78	9.3	0.7	2.0	2	0	0	2	2	2	0	MatE
DUF1980	PF09323.5	gi|568163015|ref|YP_008946317.1|	-	0.37	10.5	3.4	2.1	8.0	2.4	1.9	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1980)
TMEM154	PF15102.1	gi|568163015|ref|YP_008946317.1|	-	0.45	10.2	4.9	1.2	8.8	0.0	2.1	2	0	0	2	2	2	0	TMEM154	protein	family
TarH	PF02203.10	gi|568163015|ref|YP_008946317.1|	-	0.51	10.1	0.0	0.51	10.1	0.0	2.0	2	0	0	2	2	1	0	Tar	ligand	binding	domain	homologue
CRPA	PF05745.6	gi|568163015|ref|YP_008946317.1|	-	0.66	9.7	6.8	0.67	9.7	0.2	2.1	2	0	0	2	2	2	0	Chlamydia	15	kDa	cysteine-rich	outer	membrane	protein	(CRPA)
DUF202	PF02656.10	gi|568163015|ref|YP_008946317.1|	-	0.68	10.1	4.0	3.3	8.0	2.5	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF202)
DUF3671	PF12420.3	gi|568163015|ref|YP_008946317.1|	-	0.69	9.9	6.8	1	9.3	4.7	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function
DUF2970	PF11174.3	gi|568163015|ref|YP_008946317.1|	-	0.81	9.3	14.6	1.4	8.5	3.7	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2970)
AJAP1_PANP_C	PF15298.1	gi|568163015|ref|YP_008946317.1|	-	0.86	9.4	0.0	0.86	9.4	0.0	2.0	2	0	0	2	2	2	0	AJAP1/PANP	C-terminus
DUF4064	PF13273.1	gi|568163015|ref|YP_008946317.1|	-	1	9.5	16.2	6.5	6.9	11.2	2.0	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4064)
DUF3185	PF11381.3	gi|568163015|ref|YP_008946317.1|	-	1.2	8.9	9.8	4.1	7.2	0.9	2.7	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3185)
Nucleos_tra2_N	PF01773.15	gi|568163015|ref|YP_008946317.1|	-	1.2	9.4	8.1	0.18	12.2	1.5	2.0	2	0	0	2	2	2	0	Na+	dependent	nucleoside	transporter	N-terminus
Pox_A14	PF05767.7	gi|568163015|ref|YP_008946317.1|	-	1.3	8.9	10.0	0.24	11.4	0.3	2.2	1	1	1	2	2	2	0	Poxvirus	virion	envelope	protein	A14
Sex_peptide	PF08138.6	gi|568163015|ref|YP_008946317.1|	-	1.5	8.7	0.0	1.5	8.7	0.0	2.1	2	0	0	2	2	2	0	Sex	peptide	(SP)	family
DUF1049	PF06305.6	gi|568163015|ref|YP_008946317.1|	-	1.7	8.1	4.3	17	4.9	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1049)
DUF2500	PF10694.4	gi|568163015|ref|YP_008946317.1|	-	2	8.4	0.0	2	8.4	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2500)
DUF3784	PF12650.2	gi|568163015|ref|YP_008946317.1|	-	2.8	7.9	12.9	0.48	10.3	3.0	2.4	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3784)
Glycophorin_A	PF01102.13	gi|568163015|ref|YP_008946317.1|	-	3.1	7.5	6.0	13	5.5	1.5	2.2	2	0	0	2	2	2	0	Glycophorin	A
DUF2371	PF10177.4	gi|568163015|ref|YP_008946317.1|	-	4.1	7.2	8.9	17	5.2	5.8	1.9	1	1	0	1	1	1	0	Uncharacterised	conserved	protein	(DUF2371)
DUF986	PF06173.7	gi|568163015|ref|YP_008946317.1|	-	5.8	6.7	7.6	35	4.1	5.2	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF986)
Shisa	PF13908.1	gi|568163015|ref|YP_008946317.1|	-	8.2	6.5	12.8	2.5	8.2	0.3	2.1	1	1	0	2	2	2	0	Wnt	and	FGF	inhibitory	regulator
Vpu	PF00558.14	gi|568163015|ref|YP_008946317.1|	-	8.5	6.0	10.2	2	8.0	0.0	2.2	2	0	0	2	2	2	0	Vpu	protein
SdpI	PF13630.1	gi|568163015|ref|YP_008946317.1|	-	8.9	6.1	17.4	6.9	6.4	5.1	2.1	2	0	0	2	2	2	0	SdpI/YhfL	protein	family
AAA_21	PF13304.1	gi|568163016|ref|YP_008946318.1|	-	7.2e-20	72.1	5.2	7.2e-20	72.1	3.6	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_15	PF13175.1	gi|568163016|ref|YP_008946318.1|	-	4.1e-18	65.6	14.5	9.2e-13	48.0	0.1	2.7	3	0	0	3	3	3	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|568163016|ref|YP_008946318.1|	-	7.4e-10	39.4	2.0	7.4e-10	39.4	1.4	2.0	2	1	0	2	2	2	1	AAA	domain
SMC_N	PF02463.14	gi|568163016|ref|YP_008946318.1|	-	1.5e-08	34.1	1.0	2.4e-07	30.2	0.7	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
ABC_tran	PF00005.22	gi|568163016|ref|YP_008946318.1|	-	0.013	15.8	0.4	0.33	11.2	0.3	2.7	2	1	0	2	2	2	0	ABC	transporter
DUF2813	PF11398.3	gi|568163016|ref|YP_008946318.1|	-	0.047	12.7	0.4	0.89	8.5	0.1	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2813)
adh_short_C2	PF13561.1	gi|568163017|ref|YP_008946319.1|	-	3.5e-30	105.5	0.0	4.2e-30	105.3	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|568163017|ref|YP_008946319.1|	-	6.3e-15	55.4	0.0	1.2e-14	54.5	0.0	1.4	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|568163017|ref|YP_008946319.1|	-	5.4e-05	22.9	0.0	9.3e-05	22.1	0.0	1.3	1	0	0	1	1	1	1	KR	domain
THF_DHG_CYH_C	PF02882.14	gi|568163017|ref|YP_008946319.1|	-	0.075	12.0	0.0	0.13	11.3	0.0	1.4	1	0	0	1	1	1	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
NAD_binding_10	PF13460.1	gi|568163017|ref|YP_008946319.1|	-	0.091	12.7	0.0	0.15	12.0	0.0	1.4	1	0	0	1	1	1	0	NADH(P)-binding
UDG	PF03167.14	gi|568163018|ref|YP_008946320.1|	-	1.6e-42	144.5	0.0	2.1e-42	144.1	0.0	1.1	1	0	0	1	1	1	1	Uracil	DNA	glycosylase	superfamily
Baculo_LEF5_C	PF11792.3	gi|568163018|ref|YP_008946320.1|	-	0.089	12.1	0.1	0.21	11.0	0.1	1.6	1	0	0	1	1	1	0	Baculoviridae	late	expression	factor	5	C-terminal	domain
PAP_assoc	PF03828.14	gi|568163019|ref|YP_008946321.1|	-	0.01	15.7	0.1	0.032	14.1	0.0	2.0	1	1	0	1	1	1	0	Cid1	family	poly	A	polymerase
Imm28	PF15574.1	gi|568163019|ref|YP_008946321.1|	-	0.015	14.8	0.0	0.019	14.4	0.0	1.2	1	0	0	1	1	1	0	Immunity	protein	28
Fe_dep_repr_C	PF02742.10	gi|568163020|ref|YP_008946322.1|	-	1.4e-19	69.5	0.0	2e-19	69.0	0.0	1.3	1	0	0	1	1	1	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
HTH_45	PF14947.1	gi|568163020|ref|YP_008946322.1|	-	5.6e-06	26.0	0.0	9e-06	25.4	0.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix
DUF4423	PF14394.1	gi|568163020|ref|YP_008946322.1|	-	6e-06	25.9	0.0	8e-06	25.5	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
Fe_dep_repress	PF01325.14	gi|568163020|ref|YP_008946322.1|	-	1.2e-05	25.1	0.0	1.8e-05	24.6	0.0	1.3	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
FeoC	PF09012.5	gi|568163020|ref|YP_008946322.1|	-	0.00013	21.5	0.1	0.00022	20.8	0.0	1.4	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
HTH_27	PF13463.1	gi|568163020|ref|YP_008946322.1|	-	0.00015	22.0	0.0	0.00051	20.3	0.0	1.8	1	1	1	2	2	2	1	Winged	helix	DNA-binding	domain
MarR	PF01047.17	gi|568163020|ref|YP_008946322.1|	-	0.00022	20.8	0.0	0.00042	19.9	0.0	1.4	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|568163020|ref|YP_008946322.1|	-	0.00036	20.1	0.0	0.0019	17.8	0.0	2.1	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
LexA_DNA_bind	PF01726.11	gi|568163020|ref|YP_008946322.1|	-	0.00073	19.0	0.0	0.0015	18.0	0.0	1.6	2	0	0	2	2	1	1	LexA	DNA	binding	domain
MarR_2	PF12802.2	gi|568163020|ref|YP_008946322.1|	-	0.00076	19.0	0.0	0.0014	18.2	0.0	1.5	1	0	0	1	1	1	1	MarR	family
HTH_IclR	PF09339.5	gi|568163020|ref|YP_008946322.1|	-	0.0027	17.2	0.0	0.017	14.6	0.0	2.0	2	0	0	2	2	2	1	IclR	helix-turn-helix	domain
HTH_24	PF13412.1	gi|568163020|ref|YP_008946322.1|	-	0.0031	16.8	0.0	0.013	14.8	0.0	2.1	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
Ribosomal_S19e	PF01090.14	gi|568163020|ref|YP_008946322.1|	-	0.012	15.0	0.0	0.016	14.6	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	protein	S19e
HemN_C	PF06969.11	gi|568163020|ref|YP_008946322.1|	-	0.026	14.5	0.1	0.11	12.5	0.0	1.9	2	0	0	2	2	2	0	HemN	C-terminal	domain
DUF2250	PF10007.4	gi|568163020|ref|YP_008946322.1|	-	0.03	14.2	0.2	0.054	13.4	0.1	1.5	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_12	PF08461.5	gi|568163020|ref|YP_008946322.1|	-	0.033	13.9	0.0	0.064	13.0	0.0	1.5	1	0	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
HTH_34	PF13601.1	gi|568163020|ref|YP_008946322.1|	-	0.044	13.8	0.1	0.18	11.8	0.1	2.0	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
Rrf2	PF02082.15	gi|568163020|ref|YP_008946322.1|	-	0.052	13.6	0.0	0.13	12.4	0.0	1.7	2	0	0	2	2	2	0	Transcriptional	regulator
HGD-D	PF06050.8	gi|568163020|ref|YP_008946322.1|	-	0.058	12.1	0.1	0.13	11.0	0.1	1.7	1	1	0	1	1	1	0	2-hydroxyglutaryl-CoA	dehydratase,	D-component
Mrr_N	PF14338.1	gi|568163020|ref|YP_008946322.1|	-	0.11	12.6	0.2	0.23	11.5	0.1	1.8	1	1	0	1	1	1	0	Mrr	N-terminal	domain
IF2_N	PF04760.10	gi|568163020|ref|YP_008946322.1|	-	0.13	11.8	0.3	3.1	7.5	0.0	2.8	2	1	0	2	2	2	0	Translation	initiation	factor	IF-2,	N-terminal	region
Ftsk_gamma	PF09397.5	gi|568163020|ref|YP_008946322.1|	-	0.14	11.8	0.0	0.3	10.8	0.0	1.5	1	0	0	1	1	1	0	Ftsk	gamma	domain
DHDPS	PF00701.17	gi|568163021|ref|YP_008946323.1|	-	5.3e-56	189.3	0.0	5.7e-56	189.2	0.0	1.0	1	0	0	1	1	1	1	Dihydrodipicolinate	synthetase	family
HTH_20	PF12840.2	gi|568163022|ref|YP_008946324.1|	-	4.2e-06	26.4	0.0	6.8e-06	25.7	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|568163022|ref|YP_008946324.1|	-	7.9e-06	25.1	0.0	1.4e-05	24.3	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.2	gi|568163022|ref|YP_008946324.1|	-	2.1e-05	24.1	0.0	2.9e-05	23.6	0.0	1.2	1	0	0	1	1	1	1	MarR	family
LexA_DNA_bind	PF01726.11	gi|568163022|ref|YP_008946324.1|	-	8.7e-05	22.0	0.0	0.00016	21.1	0.0	1.4	1	0	0	1	1	1	1	LexA	DNA	binding	domain
TrmB	PF01978.14	gi|568163022|ref|YP_008946324.1|	-	9.8e-05	21.9	0.3	0.00014	21.4	0.2	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_5	PF01022.15	gi|568163022|ref|YP_008946324.1|	-	0.0014	18.2	0.0	0.0028	17.2	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_11	PF08279.7	gi|568163022|ref|YP_008946324.1|	-	0.0023	17.5	0.1	0.0055	16.3	0.0	1.6	2	0	0	2	2	2	1	HTH	domain
HTH_27	PF13463.1	gi|568163022|ref|YP_008946324.1|	-	0.0051	17.0	0.0	0.0078	16.5	0.0	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_36	PF13730.1	gi|568163022|ref|YP_008946324.1|	-	0.037	14.1	0.0	0.061	13.4	0.0	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_12	PF08461.5	gi|568163022|ref|YP_008946324.1|	-	0.099	12.3	0.0	0.27	10.9	0.0	1.8	2	0	0	2	2	2	0	Ribonuclease	R	winged-helix	domain
MarR	PF01047.17	gi|568163022|ref|YP_008946324.1|	-	0.15	11.8	0.0	0.25	11.0	0.0	1.3	1	0	0	1	1	1	0	MarR	family
HTH_28	PF13518.1	gi|568163022|ref|YP_008946324.1|	-	0.15	12.0	0.0	0.25	11.3	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
DUF3043	PF11241.3	gi|568163022|ref|YP_008946324.1|	-	0.43	10.1	2.5	0.67	9.5	1.7	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3043)
AAA_17	PF13207.1	gi|568164739|ref|YP_008946325.1|	-	0.00025	21.8	1.3	0.0086	16.8	0.0	3.4	3	0	0	3	3	3	1	AAA	domain
AAA_18	PF13238.1	gi|568164739|ref|YP_008946325.1|	-	0.00028	21.2	2.5	0.0016	18.7	0.1	3.2	3	0	0	3	3	3	1	AAA	domain
AAA_14	PF13173.1	gi|568164739|ref|YP_008946325.1|	-	0.0054	16.6	3.1	0.013	15.3	0.1	3.1	2	0	0	2	2	2	1	AAA	domain
DUF1474	PF07342.6	gi|568164739|ref|YP_008946325.1|	-	0.013	15.7	0.9	0.013	15.7	0.6	3.7	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF1474)
Aldedh	PF00171.17	gi|568163023|ref|YP_008946327.1|	-	2.5e-131	438.1	0.0	3.6e-131	437.6	0.0	1.1	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
LuxC	PF05893.9	gi|568163023|ref|YP_008946327.1|	-	4.4e-07	28.9	0.0	0.0011	17.7	0.0	2.4	2	1	0	2	2	2	2	Acyl-CoA	reductase	(LuxC)
CoA_binding_2	PF13380.1	gi|568163024|ref|YP_008946329.1|	-	4.7e-35	120.2	0.1	5.6e-35	120.0	0.1	1.1	1	0	0	1	1	1	1	CoA	binding	domain
CoA_binding	PF02629.14	gi|568163024|ref|YP_008946329.1|	-	3.7e-05	24.1	0.0	5.5e-05	23.6	0.0	1.3	1	0	0	1	1	1	1	CoA	binding	domain
p450	PF00067.17	gi|568163024|ref|YP_008946329.1|	-	0.11	10.9	0.0	0.15	10.5	0.0	1.1	1	0	0	1	1	1	0	Cytochrome	P450
DUF308	PF03729.8	gi|568164742|ref|YP_008946330.1|	-	0.0035	17.3	3.6	0.0042	17.0	2.5	1.2	1	0	0	1	1	1	1	Short	repeat	of	unknown	function	(DUF308)
Tetraspannin	PF00335.15	gi|568164742|ref|YP_008946330.1|	-	4.4	6.5	6.9	5.9	6.0	4.8	1.4	1	1	0	1	1	1	0	Tetraspanin	family
DUF2970	PF11174.3	gi|568164742|ref|YP_008946330.1|	-	6.8	6.3	7.6	1.3	8.6	3.1	1.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2970)
TFIIS_C	PF01096.13	gi|568163025|ref|YP_008946331.1|	-	1.2e-24	85.5	10.7	3.4e-22	77.7	1.0	3.2	3	0	0	3	3	3	1	Transcription	factor	S-II	(TFIIS)
RNA_POL_M_15KD	PF02150.11	gi|568163025|ref|YP_008946331.1|	-	1.3e-09	37.5	3.2	1.3e-09	37.5	2.2	3.1	3	0	0	3	3	3	1	RNA	polymerases	M/15	Kd	subunit
Zn_Tnp_IS1595	PF12760.2	gi|568163025|ref|YP_008946331.1|	-	8.7e-09	35.0	8.9	0.00037	20.2	0.4	2.3	2	0	0	2	2	2	2	Transposase	zinc-ribbon	domain
DUF2387	PF09526.5	gi|568163025|ref|YP_008946331.1|	-	5.3e-08	32.6	5.1	2.7e-05	24.0	0.8	2.2	2	0	0	2	2	2	2	Probable	metal-binding	protein	(DUF2387)
TF_Zn_Ribbon	PF08271.7	gi|568163025|ref|YP_008946331.1|	-	5.2e-06	25.6	6.6	0.032	13.5	1.1	3.1	2	2	0	2	2	2	2	TFIIB	zinc-binding
DZR	PF12773.2	gi|568163025|ref|YP_008946331.1|	-	1.3e-05	24.9	9.5	0.0006	19.5	0.9	2.6	2	1	0	2	2	2	2	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|568163025|ref|YP_008946331.1|	-	1.7e-05	23.8	13.3	0.095	11.9	0.2	4.2	4	0	0	4	4	4	1	zinc-ribbon	domain
zf-TFIIB	PF13453.1	gi|568163025|ref|YP_008946331.1|	-	0.00014	20.9	1.9	0.00014	20.9	1.4	2.9	2	1	0	2	2	2	1	Transcription	factor	zinc-finger
OrfB_Zn_ribbon	PF07282.6	gi|568163025|ref|YP_008946331.1|	-	0.00019	21.0	10.6	0.017	14.7	1.2	2.9	1	1	1	2	2	2	2	Putative	transposase	DNA-binding	domain
zf-ISL3	PF14690.1	gi|568163025|ref|YP_008946331.1|	-	0.00019	21.3	7.2	3.4	7.7	0.0	4.1	3	1	1	4	4	4	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Zn-ribbon_8	PF09723.5	gi|568163025|ref|YP_008946331.1|	-	0.0006	19.7	15.6	1.6	8.7	0.1	4.4	4	1	0	4	4	4	1	Zinc	ribbon	domain
zinc_ribbon_5	PF13719.1	gi|568163025|ref|YP_008946331.1|	-	0.00096	18.6	14.0	0.13	11.8	0.2	4.4	5	0	0	5	5	4	1	zinc-ribbon	domain
Nudix_N_2	PF14803.1	gi|568163025|ref|YP_008946331.1|	-	0.0011	18.6	10.0	0.028	14.1	1.8	3.7	3	1	0	3	3	3	1	Nudix	N-terminal
zinc_ribbon_4	PF13717.1	gi|568163025|ref|YP_008946331.1|	-	0.0019	17.8	14.2	0.16	11.6	0.3	4.5	5	0	0	5	5	4	1	zinc-ribbon	domain
Zn_ribbon_recom	PF13408.1	gi|568163025|ref|YP_008946331.1|	-	0.0034	17.6	2.7	0.0034	17.6	1.9	2.5	2	1	0	2	2	2	1	Recombinase	zinc	beta	ribbon	domain
Lar_restr_allev	PF14354.1	gi|568163025|ref|YP_008946331.1|	-	0.0036	17.5	9.1	0.26	11.6	0.9	2.6	1	1	2	3	3	3	2	Restriction	alleviation	protein	Lar
zf-NADH-PPase	PF09297.6	gi|568163025|ref|YP_008946331.1|	-	0.0039	16.6	10.8	0.067	12.7	0.1	3.9	4	0	0	4	4	4	1	NADH	pyrophosphatase	zinc	ribbon	domain
zinc_ribbon_2	PF13240.1	gi|568163025|ref|YP_008946331.1|	-	0.0041	16.5	21.9	0.21	11.1	0.3	4.5	5	0	0	5	5	4	1	zinc-ribbon	domain
Baculo_LEF5_C	PF11792.3	gi|568163025|ref|YP_008946331.1|	-	0.0064	15.8	2.3	0.23	10.8	0.0	3.2	3	0	0	3	3	3	1	Baculoviridae	late	expression	factor	5	C-terminal	domain
YhfH	PF14149.1	gi|568163025|ref|YP_008946331.1|	-	0.0083	15.8	13.0	3.8	7.3	0.1	4.2	3	1	1	4	4	4	0	YhfH-like	protein
Terminase_GpA	PF05876.7	gi|568163025|ref|YP_008946331.1|	-	0.0089	14.4	6.5	0.024	13.0	0.5	2.1	1	1	1	2	2	2	1	Phage	terminase	large	subunit	(GpA)
C1_2	PF03107.11	gi|568163025|ref|YP_008946331.1|	-	0.015	15.3	4.5	1.3	9.2	0.4	2.7	2	0	0	2	2	2	0	C1	domain
zf-DNA_Pol	PF08996.5	gi|568163025|ref|YP_008946331.1|	-	0.016	14.5	3.6	0.16	11.2	0.1	2.2	2	0	0	2	2	2	0	DNA	Polymerase	alpha	zinc	finger
DNA_ligase_ZBD	PF03119.11	gi|568163025|ref|YP_008946331.1|	-	0.019	14.6	4.1	0.51	10.0	0.0	2.7	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
DUF2310	PF10071.4	gi|568163025|ref|YP_008946331.1|	-	0.02	13.8	0.1	0.02	13.8	0.1	1.8	1	1	1	2	2	2	0	Zn-ribbon-containing,	possibly	nucleic-acid-binding	protein	(DUF2310)
C1_1	PF00130.17	gi|568163025|ref|YP_008946331.1|	-	0.024	14.3	1.7	0.024	14.3	1.2	2.7	2	1	1	3	3	3	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
UPF0547	PF10571.4	gi|568163025|ref|YP_008946331.1|	-	0.032	13.9	13.2	4	7.2	0.4	4.4	4	0	0	4	4	4	0	Uncharacterised	protein	family	UPF0547
Rubredoxin	PF00301.15	gi|568163025|ref|YP_008946331.1|	-	0.036	13.9	11.4	1.6	8.6	0.2	4.1	4	0	0	4	4	4	0	Rubredoxin
zf-Mss51	PF13824.1	gi|568163025|ref|YP_008946331.1|	-	0.047	13.5	8.4	0.58	10.0	0.3	2.8	2	2	0	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
zf-UBP	PF02148.14	gi|568163025|ref|YP_008946331.1|	-	0.048	13.7	3.1	1.8	8.7	1.9	2.5	1	1	0	1	1	1	0	Zn-finger	in	ubiquitin-hydrolases	and	other	protein
DUF2296	PF10058.4	gi|568163025|ref|YP_008946331.1|	-	0.049	13.3	8.3	0.81	9.4	1.7	3.5	3	1	0	3	3	3	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
zf-MYND	PF01753.13	gi|568163025|ref|YP_008946331.1|	-	0.06	13.2	6.8	1.6	8.6	0.4	2.4	2	0	0	2	2	2	0	MYND	finger
DUF35_N	PF12172.3	gi|568163025|ref|YP_008946331.1|	-	0.072	13.0	8.0	24	5.0	0.1	4.0	4	0	0	4	4	4	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-like	PF04071.7	gi|568163025|ref|YP_008946331.1|	-	0.076	12.7	0.4	0.076	12.7	0.3	2.1	2	1	0	2	2	2	0	Cysteine-rich	small	domain
DRP	PF06044.7	gi|568163025|ref|YP_008946331.1|	-	0.08	11.9	6.0	0.3	10.0	0.7	2.0	1	1	1	2	2	2	0	Dam-replacing	family
GFA	PF04828.9	gi|568163025|ref|YP_008946331.1|	-	0.14	12.1	10.3	0.27	11.2	1.3	3.3	1	1	3	4	4	4	0	Glutathione-dependent	formaldehyde-activating	enzyme
DUF4503	PF14951.1	gi|568163025|ref|YP_008946331.1|	-	0.14	10.2	2.6	0.08	11.0	0.2	1.6	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4503)
PhnA_Zn_Ribbon	PF08274.7	gi|568163025|ref|YP_008946331.1|	-	0.24	11.2	9.0	8.9	6.1	0.5	3.6	2	2	0	2	2	2	0	PhnA	Zinc-Ribbon
zf-C4_Topoisom	PF01396.14	gi|568163025|ref|YP_008946331.1|	-	0.25	10.8	15.9	0.51	9.8	3.2	3.4	3	1	0	3	3	3	0	Topoisomerase	DNA	binding	C4	zinc	finger
Ribosomal_L32p	PF01783.18	gi|568163025|ref|YP_008946331.1|	-	0.28	11.3	5.9	27	5.0	0.7	3.9	2	1	0	3	3	3	0	Ribosomal	L32p	protein	family
PolC_DP2	PF03833.8	gi|568163025|ref|YP_008946331.1|	-	0.3	8.6	6.3	0.33	8.5	0.5	2.0	1	1	1	2	2	2	0	DNA	polymerase	II	large	subunit	DP2
DUF329	PF03884.9	gi|568163025|ref|YP_008946331.1|	-	0.34	10.5	6.4	3.9	7.1	0.7	3.3	3	1	0	3	3	3	0	Domain	of	unknown	function	(DUF329)
Ribosomal_S27e	PF01667.12	gi|568163025|ref|YP_008946331.1|	-	0.41	10.2	10.5	3	7.4	0.8	3.8	2	2	0	2	2	2	0	Ribosomal	protein	S27
zf-tcix	PF14952.1	gi|568163025|ref|YP_008946331.1|	-	0.46	9.8	20.0	6.4	6.2	0.7	4.2	3	1	1	4	4	4	0	Putative	treble-clef,	zinc-finger,	Zn-binding
Ribosomal_L37ae	PF01780.14	gi|568163025|ref|YP_008946331.1|	-	0.46	10.3	9.6	0.24	11.3	1.0	2.8	2	2	0	2	2	2	0	Ribosomal	L37ae	protein	family
DUF3797	PF12677.2	gi|568163025|ref|YP_008946331.1|	-	0.47	10.1	9.8	1.9	8.1	0.0	4.0	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF3797)
IBR	PF01485.16	gi|568163025|ref|YP_008946331.1|	-	0.54	10.1	12.5	0.19	11.6	1.5	3.0	2	1	0	2	2	2	0	IBR	domain
HypA	PF01155.14	gi|568163025|ref|YP_008946331.1|	-	0.63	9.7	9.0	1.3	8.7	0.9	2.9	1	1	1	2	2	2	0	Hydrogenase	expression/synthesis	hypA	family
DUF2752	PF10825.3	gi|568163025|ref|YP_008946331.1|	-	0.65	10.0	0.0	0.65	10.0	0.0	2.5	3	0	0	3	3	2	0	Protein	of	unknown	function	(DUF2752)
DUF164	PF02591.10	gi|568163025|ref|YP_008946331.1|	-	0.67	9.8	6.4	29	4.5	0.1	3.7	4	0	0	4	4	4	0	Putative	zinc	ribbon	domain
Zn_Tnp_IS91	PF14319.1	gi|568163025|ref|YP_008946331.1|	-	0.68	9.4	10.6	4.2	6.9	0.1	3.8	2	2	2	4	4	4	0	Transposase	zinc-binding	domain
Desulfoferrod_N	PF06397.7	gi|568163025|ref|YP_008946331.1|	-	0.71	9.3	15.2	0.45	9.9	0.4	3.4	4	0	0	4	4	3	0	Desulfoferrodoxin,	N-terminal	domain
C1_4	PF07975.7	gi|568163025|ref|YP_008946331.1|	-	0.71	9.9	9.5	9	6.3	0.8	3.1	2	1	1	3	3	3	0	TFIIH	C1-like	domain
zf-GRF	PF06839.7	gi|568163025|ref|YP_008946331.1|	-	0.71	9.8	10.3	1.3	8.9	0.2	3.0	2	1	0	2	2	2	0	GRF	zinc	finger
zf-C2H2_4	PF13894.1	gi|568163025|ref|YP_008946331.1|	-	0.74	10.2	8.9	43	4.7	0.3	4.0	4	0	0	4	4	4	0	C2H2-type	zinc	finger
Cys_rich_CPCC	PF14206.1	gi|568163025|ref|YP_008946331.1|	-	0.78	9.3	7.4	0.5	9.9	1.0	2.9	3	1	0	3	3	2	0	Cysteine-rich	CPCC
Tnp_zf-ribbon_2	PF13842.1	gi|568163025|ref|YP_008946331.1|	-	0.84	10.0	12.3	17	5.9	3.7	3.5	3	1	0	3	3	3	0	DDE_Tnp_1-like	zinc-ribbon
RecR	PF02132.10	gi|568163025|ref|YP_008946331.1|	-	0.85	9.1	11.4	1.3	8.4	0.1	3.8	4	0	0	4	4	4	0	RecR	protein
zf-H2C2_2	PF13465.1	gi|568163025|ref|YP_008946331.1|	-	0.85	10.0	17.7	1.3	9.3	0.2	4.2	4	1	0	4	4	4	0	Zinc-finger	double	domain
zf-HIT	PF04438.11	gi|568163025|ref|YP_008946331.1|	-	0.99	9.1	16.3	4.3	7.0	0.7	4.1	4	0	0	4	4	4	0	HIT	zinc	finger
Zn_Tnp_IS1	PF03811.8	gi|568163025|ref|YP_008946331.1|	-	1.3	8.6	0.0	1.3	8.6	0.0	3.6	3	1	0	3	3	3	0	InsA	N-terminal	domain
DUF2082	PF09855.4	gi|568163025|ref|YP_008946331.1|	-	1.3	8.9	14.1	20	5.1	0.7	4.1	3	1	0	4	4	4	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
C1_3	PF07649.7	gi|568163025|ref|YP_008946331.1|	-	1.4	9.0	0.1	1.4	9.0	0.0	3.1	4	0	0	4	4	2	0	C1-like	domain
DNA_RNApol_7kD	PF03604.8	gi|568163025|ref|YP_008946331.1|	-	1.4	8.4	12.5	12	5.4	0.2	4.0	4	0	0	4	4	4	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
FdhE	PF04216.7	gi|568163025|ref|YP_008946331.1|	-	1.5	8.4	8.8	0.71	9.5	0.3	2.1	1	1	0	2	2	2	0	Protein	involved	in	formate	dehydrogenase	formation
Opy2	PF09463.5	gi|568163025|ref|YP_008946331.1|	-	1.7	8.7	7.8	2.2	8.4	0.0	3.5	4	0	0	4	4	4	0	Opy2	protein
Auto_anti-p27	PF06677.7	gi|568163025|ref|YP_008946331.1|	-	2.3	8.0	15.6	24	4.7	0.1	3.9	3	1	1	4	4	4	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zf-CHY	PF05495.7	gi|568163025|ref|YP_008946331.1|	-	2.3	8.4	9.0	5.5	7.2	1.1	2.7	1	1	1	2	2	2	0	CHY	zinc	finger
DUF1610	PF07754.6	gi|568163025|ref|YP_008946331.1|	-	2.8	8.1	24.0	4.9	7.3	0.5	4.3	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF1610)
Baculo_ME53	PF06061.6	gi|568163025|ref|YP_008946331.1|	-	4.9	6.0	8.9	0.32	9.9	0.6	2.4	2	1	0	2	2	2	0	Baculoviridae	ME53
zf-CCHC_4	PF14392.1	gi|568163025|ref|YP_008946331.1|	-	5.7	6.6	8.8	31	4.3	0.0	3.9	4	0	0	4	4	4	0	Zinc	knuckle
Rpr2	PF04032.11	gi|568163025|ref|YP_008946331.1|	-	5.8	6.8	13.4	4	7.3	2.4	3.5	2	2	0	2	2	2	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
Ribosomal_L44	PF00935.14	gi|568163025|ref|YP_008946331.1|	-	5.8	6.9	8.5	17	5.5	0.3	3.3	3	1	1	4	4	3	0	Ribosomal	protein	L44
zinc-ribbons_6	PF07191.7	gi|568163025|ref|YP_008946331.1|	-	7.4	6.4	8.3	1.9	8.3	0.4	2.8	2	1	0	2	2	2	0	zinc-ribbons
zf-UBR	PF02207.15	gi|568163025|ref|YP_008946331.1|	-	7.9	6.2	9.4	4.3	7.1	0.4	2.9	2	1	1	3	3	3	0	Putative	zinc	finger	in	N-recognin	(UBR	box)
RNA_pol_L_2	PF13656.1	gi|568163026|ref|YP_008946333.1|	-	1.9e-21	75.2	0.0	2.2e-21	75.0	0.0	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
RNA_pol_L	PF01193.19	gi|568163026|ref|YP_008946333.1|	-	3.5e-10	38.8	0.1	4.4e-10	38.5	0.0	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
ECR1_N	PF14382.1	gi|568163027|ref|YP_008946334.1|	-	1.2e-10	40.4	0.4	4.2e-10	38.7	0.1	2.0	2	0	0	2	2	2	1	Exosome	complex	exonuclease	RRP4	N-terminal	region
OrfB_Zn_ribbon	PF07282.6	gi|568163027|ref|YP_008946334.1|	-	0.00046	19.8	0.5	0.00087	18.9	0.4	1.4	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
S1	PF00575.18	gi|568163027|ref|YP_008946334.1|	-	0.00079	19.4	0.2	0.005	16.9	0.2	2.2	1	1	0	1	1	1	1	S1	RNA	binding	domain
DZR	PF12773.2	gi|568163027|ref|YP_008946334.1|	-	0.0023	17.6	0.4	0.0036	17.0	0.3	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
TF_Zn_Ribbon	PF08271.7	gi|568163027|ref|YP_008946334.1|	-	0.0081	15.4	0.4	0.017	14.4	0.3	1.5	1	0	0	1	1	1	1	TFIIB	zinc-binding
Prok-RING_1	PF14446.1	gi|568163027|ref|YP_008946334.1|	-	0.016	14.9	0.9	0.024	14.3	0.6	1.2	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
EXOSC1	PF10447.4	gi|568163027|ref|YP_008946334.1|	-	0.016	15.1	0.1	0.033	14.1	0.0	1.5	1	0	0	1	1	1	0	Exosome	component	EXOSC1/CSL4
zf-NADH-PPase	PF09297.6	gi|568163027|ref|YP_008946334.1|	-	0.019	14.4	0.4	0.035	13.5	0.3	1.4	1	1	0	1	1	1	0	NADH	pyrophosphatase	zinc	ribbon	domain
Auto_anti-p27	PF06677.7	gi|568163027|ref|YP_008946334.1|	-	0.022	14.5	1.6	0.052	13.3	1.1	1.7	1	0	0	1	1	1	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
HypA	PF01155.14	gi|568163027|ref|YP_008946334.1|	-	0.035	13.7	0.8	0.063	12.9	0.6	1.4	1	1	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
A2L_zn_ribbon	PF08792.5	gi|568163027|ref|YP_008946334.1|	-	0.046	13.2	0.8	0.097	12.1	0.5	1.5	1	0	0	1	1	1	0	A2L	zinc	ribbon	domain
NOB1_Zn_bind	PF08772.6	gi|568163027|ref|YP_008946334.1|	-	0.047	13.5	0.2	0.087	12.6	0.1	1.4	1	0	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
zf-ribbon_3	PF13248.1	gi|568163027|ref|YP_008946334.1|	-	0.082	12.1	2.6	0.32	10.2	1.8	1.9	1	1	1	2	2	2	0	zinc-ribbon	domain
Nudix_N_2	PF14803.1	gi|568163027|ref|YP_008946334.1|	-	0.16	11.7	1.0	1.1	8.9	0.7	2.1	1	1	0	1	1	1	0	Nudix	N-terminal
DNA_RNApol_7kD	PF03604.8	gi|568163027|ref|YP_008946334.1|	-	0.16	11.4	3.2	0.35	10.3	2.2	1.5	1	0	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Zn-ribbon_8	PF09723.5	gi|568163027|ref|YP_008946334.1|	-	0.37	10.7	3.4	6.2	6.8	2.4	2.3	1	1	0	1	1	1	0	Zinc	ribbon	domain
Ribosomal_S27e	PF01667.12	gi|568163027|ref|YP_008946334.1|	-	0.44	10.1	2.2	3.6	7.2	0.1	2.2	2	0	0	2	2	2	0	Ribosomal	protein	S27
zinc_ribbon_2	PF13240.1	gi|568163027|ref|YP_008946334.1|	-	1.7	8.2	4.4	12	5.5	0.5	2.3	1	1	1	2	2	2	0	zinc-ribbon	domain
Diphthamide_syn	PF01866.12	gi|568163028|ref|YP_008946335.1|	-	1.1e-96	323.6	0.0	1.4e-96	323.3	0.0	1.1	1	0	0	1	1	1	1	Putative	diphthamide	synthesis	protein
Ribosomal_L16	PF00252.13	gi|568163029|ref|YP_008946336.1|	-	9.4e-33	112.7	0.4	1.1e-32	112.6	0.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L16p/L10e
Pcc1	PF09341.5	gi|568163030|ref|YP_008946337.1|	-	5.8e-07	29.4	0.2	6.6e-07	29.2	0.1	1.1	1	0	0	1	1	1	1	Transcription	factor	Pcc1
DUF677	PF05055.7	gi|568163030|ref|YP_008946337.1|	-	0.054	12.1	3.0	0.058	12.0	2.1	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF677)
UPF0104	PF03706.8	gi|568163032|ref|YP_008946339.1|	-	2.2e-15	56.6	22.5	3.2e-15	56.1	15.6	1.2	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0104)
EI24	PF07264.6	gi|568163032|ref|YP_008946339.1|	-	0.015	14.7	22.2	1.5	8.2	12.0	2.9	1	1	1	2	2	2	0	Etoposide-induced	protein	2.4	(EI24)
DUF2393	PF09624.5	gi|568163032|ref|YP_008946339.1|	-	1	8.8	8.4	1.6	8.2	1.2	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2393)
ThiF	PF00899.16	gi|568163033|ref|YP_008946340.1|	-	4e-45	152.9	1.6	9.2e-45	151.8	0.2	1.9	2	0	0	2	2	2	1	ThiF	family
MoeZ_MoeB	PF05237.8	gi|568163033|ref|YP_008946340.1|	-	4.1e-12	45.5	0.1	9.6e-12	44.3	0.0	1.7	1	0	0	1	1	1	1	MoeZ/MoeB	domain
NAD_Gly3P_dh_N	PF01210.18	gi|568163033|ref|YP_008946340.1|	-	0.00046	19.9	0.1	0.0011	18.6	0.0	1.6	1	1	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
2-Hacid_dh_C	PF02826.14	gi|568163033|ref|YP_008946340.1|	-	0.0025	16.9	0.4	0.0068	15.5	0.1	1.8	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
3HCDH_N	PF02737.13	gi|568163033|ref|YP_008946340.1|	-	0.0098	15.5	0.0	0.015	14.9	0.0	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
TrkA_N	PF02254.13	gi|568163033|ref|YP_008946340.1|	-	0.014	15.3	0.6	0.034	14.1	0.1	1.9	2	0	0	2	2	2	0	TrkA-N	domain
Lycopene_cycl	PF05834.7	gi|568163033|ref|YP_008946340.1|	-	0.015	14.1	0.0	0.02	13.8	0.0	1.1	1	0	0	1	1	1	0	Lycopene	cyclase	protein
ApbA	PF02558.11	gi|568163033|ref|YP_008946340.1|	-	0.017	14.5	0.1	0.042	13.2	0.0	1.8	2	0	0	2	2	2	0	Ketopantoate	reductase	PanE/ApbA
FAD_binding_3	PF01494.14	gi|568163033|ref|YP_008946340.1|	-	0.017	14.1	0.1	0.023	13.7	0.1	1.1	1	0	0	1	1	1	0	FAD	binding	domain
DAO	PF01266.19	gi|568163033|ref|YP_008946340.1|	-	0.044	12.6	0.7	0.083	11.7	0.5	1.4	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
Shikimate_DH	PF01488.15	gi|568163033|ref|YP_008946340.1|	-	0.08	13.0	1.3	0.18	11.8	0.4	2.0	2	1	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
F420_oxidored	PF03807.12	gi|568163033|ref|YP_008946340.1|	-	0.1	13.0	0.5	0.3	11.5	0.4	1.9	1	1	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_8	PF13450.1	gi|568163033|ref|YP_008946340.1|	-	0.2	11.7	1.1	0.42	10.6	0.5	1.8	2	0	0	2	2	2	0	NAD(P)-binding	Rossmann-like	domain
Transketolase_N	PF00456.16	gi|568163034|ref|YP_008946341.1|	-	1.7e-43	148.7	0.0	4e-43	147.4	0.0	1.5	1	1	0	1	1	1	1	Transketolase,	thiamine	diphosphate	binding	domain
DXP_synthase_N	PF13292.1	gi|568163034|ref|YP_008946341.1|	-	1.8e-11	43.5	0.0	1.4e-08	34.0	0.0	2.2	1	1	1	2	2	2	2	1-deoxy-D-xylulose-5-phosphate	synthase
TPP_enzyme_C	PF02775.16	gi|568163034|ref|YP_008946341.1|	-	8.6e-06	25.4	0.3	0.00018	21.1	0.2	2.2	1	1	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
E1_dh	PF00676.15	gi|568163034|ref|YP_008946341.1|	-	6.7e-05	21.7	0.0	9.6e-05	21.2	0.0	1.2	1	0	0	1	1	1	1	Dehydrogenase	E1	component
XFP_N	PF09364.5	gi|568163034|ref|YP_008946341.1|	-	0.00063	18.4	0.1	0.00081	18.0	0.0	1.2	1	0	0	1	1	1	1	XFP	N-terminal	domain
Transket_pyr	PF02779.19	gi|568163035|ref|YP_008946342.1|	-	2.3e-38	131.4	0.0	3.5e-38	130.8	0.0	1.2	1	0	0	1	1	1	1	Transketolase,	pyrimidine	binding	domain
Transketolase_C	PF02780.15	gi|568163035|ref|YP_008946342.1|	-	6.6e-29	100.3	0.0	3.2e-28	98.1	0.0	1.9	2	0	0	2	2	2	1	Transketolase,	C-terminal	domain
PDH	PF02153.12	gi|568163036|ref|YP_008946343.1|	-	1.9e-19	69.5	0.0	5.7e-19	67.9	0.0	1.8	2	0	0	2	2	2	1	Prephenate	dehydrogenase
CM_2	PF01817.16	gi|568163036|ref|YP_008946343.1|	-	2.4e-15	56.3	0.0	5.8e-15	55.1	0.0	1.7	1	0	0	1	1	1	1	Chorismate	mutase	type	II
F420_oxidored	PF03807.12	gi|568163036|ref|YP_008946343.1|	-	4.8e-10	39.7	0.0	9.6e-10	38.7	0.0	1.5	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
Shikimate_DH	PF01488.15	gi|568163036|ref|YP_008946343.1|	-	6.7e-08	32.7	0.0	1.3e-07	31.8	0.0	1.4	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
IlvN	PF07991.7	gi|568163036|ref|YP_008946343.1|	-	0.00014	21.2	0.0	0.0003	20.2	0.0	1.5	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
DRTGG	PF07085.7	gi|568163036|ref|YP_008946343.1|	-	0.00036	20.1	0.0	0.038	13.6	0.0	2.6	2	1	0	2	2	2	1	DRTGG	domain
3HCDH_N	PF02737.13	gi|568163036|ref|YP_008946343.1|	-	0.00053	19.6	0.0	0.0025	17.5	0.0	2.0	1	1	1	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.14	gi|568163036|ref|YP_008946343.1|	-	0.0012	18.0	0.0	0.0022	17.1	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
TrkA_N	PF02254.13	gi|568163036|ref|YP_008946343.1|	-	0.016	15.2	0.0	0.051	13.5	0.0	1.9	1	0	0	1	1	1	0	TrkA-N	domain
NAD_binding_2	PF03446.10	gi|568163036|ref|YP_008946343.1|	-	0.028	14.2	0.0	0.061	13.1	0.0	1.6	1	0	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.18	gi|568163036|ref|YP_008946343.1|	-	0.034	13.8	0.0	0.067	12.9	0.0	1.5	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
ApbA	PF02558.11	gi|568163036|ref|YP_008946343.1|	-	0.037	13.4	0.0	0.072	12.5	0.0	1.5	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
Saccharop_dh	PF03435.13	gi|568163036|ref|YP_008946343.1|	-	0.12	11.3	0.0	0.19	10.7	0.0	1.3	1	0	0	1	1	1	0	Saccharopine	dehydrogenase
DAHP_synth_1	PF00793.15	gi|568163037|ref|YP_008946344.1|	-	9.5e-73	244.2	0.0	1.2e-72	243.9	0.0	1.0	1	0	0	1	1	1	1	DAHP	synthetase	I	family
NeuB	PF03102.9	gi|568163037|ref|YP_008946344.1|	-	4.8e-08	32.4	0.0	0.0024	17.0	0.0	2.6	2	1	1	3	3	3	2	NeuB	family
PA	PF02225.17	gi|568163037|ref|YP_008946344.1|	-	0.039	13.6	1.6	7.7	6.2	0.0	3.3	2	1	0	2	2	2	0	PA	domain
DHQ_synthase	PF01761.15	gi|568163038|ref|YP_008946345.1|	-	3.9e-92	307.8	0.0	4.7e-92	307.5	0.0	1.1	1	0	0	1	1	1	1	3-dehydroquinate	synthase
Fe-ADH	PF00465.14	gi|568163038|ref|YP_008946345.1|	-	2.1e-06	26.6	0.1	0.00034	19.3	0.0	2.3	2	1	0	2	2	2	2	Iron-containing	alcohol	dehydrogenase
Fe-ADH_2	PF13685.1	gi|568163038|ref|YP_008946345.1|	-	1.6e-05	24.3	0.0	2.9e-05	23.5	0.0	1.5	1	1	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Shikimate_dh_N	PF08501.6	gi|568163039|ref|YP_008946346.1|	-	2.2e-23	82.1	0.0	5e-23	80.9	0.0	1.6	1	0	0	1	1	1	1	Shikimate	dehydrogenase	substrate	binding	domain
Shikimate_DH	PF01488.15	gi|568163039|ref|YP_008946346.1|	-	5.5e-10	39.4	0.0	9e-10	38.7	0.0	1.3	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
ApbA	PF02558.11	gi|568163039|ref|YP_008946346.1|	-	0.00091	18.6	0.0	0.0014	18.0	0.0	1.3	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
AlaDh_PNT_C	PF01262.16	gi|568163039|ref|YP_008946346.1|	-	0.005	16.4	0.0	0.0086	15.6	0.0	1.3	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
NAD_binding_7	PF13241.1	gi|568163039|ref|YP_008946346.1|	-	0.0053	16.9	0.0	0.0094	16.1	0.0	1.4	1	0	0	1	1	1	1	Putative	NAD(P)-binding
F420_oxidored	PF03807.12	gi|568163039|ref|YP_008946346.1|	-	0.013	15.8	0.0	0.049	14.0	0.0	1.9	2	0	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
Saccharop_dh	PF03435.13	gi|568163039|ref|YP_008946346.1|	-	0.035	13.0	0.0	0.045	12.7	0.0	1.2	1	0	0	1	1	1	0	Saccharopine	dehydrogenase
NAD_binding_10	PF13460.1	gi|568163039|ref|YP_008946346.1|	-	0.1	12.5	0.0	0.17	11.8	0.0	1.3	1	0	0	1	1	1	0	NADH(P)-binding
Chorismate_synt	PF01264.16	gi|568163040|ref|YP_008946347.1|	-	1.3e-130	434.9	0.0	1.5e-130	434.7	0.0	1.0	1	0	0	1	1	1	1	Chorismate	synthase
GHMP_kinases_N	PF00288.21	gi|568163041|ref|YP_008946348.1|	-	1.5e-08	34.5	0.1	2.8e-08	33.6	0.0	1.5	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|568163041|ref|YP_008946348.1|	-	0.00076	19.6	0.1	0.0017	18.4	0.0	1.5	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
EPSP_synthase	PF00275.15	gi|568163042|ref|YP_008946349.1|	-	9.1e-71	238.4	0.0	1.1e-70	238.2	0.0	1.0	1	0	0	1	1	1	1	EPSP	synthase	(3-phosphoshikimate	1-carboxyvinyltransferase)
DHquinase_I	PF01487.10	gi|568163043|ref|YP_008946350.1|	-	7.6e-15	55.1	0.1	1.2e-14	54.5	0.0	1.3	1	0	0	1	1	1	1	Type	I	3-dehydroquinase
DUF1892	PF08987.5	gi|568163043|ref|YP_008946350.1|	-	0.15	12.1	2.3	1.4	8.9	0.1	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1892)
Rieske	PF00355.21	gi|568163044|ref|YP_008946351.1|	-	4e-16	58.3	0.0	4.7e-16	58.1	0.0	1.0	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Rieske_2	PF13806.1	gi|568163044|ref|YP_008946351.1|	-	7.9e-09	35.1	0.0	9.8e-09	34.8	0.0	1.1	1	0	0	1	1	1	1	Rieske-like	[2Fe-2S]	domain
GxGYxYP	PF14323.1	gi|568163045|ref|YP_008946352.1|	-	0.016	13.9	0.3	0.036	12.7	0.1	1.6	2	0	0	2	2	2	0	GxGYxY	sequence	motif	in	domain	of	unknown	function
OKR_DC_1_N	PF03709.10	gi|568163045|ref|YP_008946352.1|	-	0.047	13.7	0.2	0.072	13.1	0.1	1.3	1	1	0	1	1	1	0	Orn/Lys/Arg	decarboxylase,	N-terminal	domain
DEAD_2	PF06733.10	gi|568163046|ref|YP_008946353.1|	-	3.4e-26	91.6	0.2	7e-26	90.6	0.2	1.5	1	0	0	1	1	1	1	DEAD_2
Helicase_C_2	PF13307.1	gi|568163046|ref|YP_008946353.1|	-	5.9e-25	88.1	0.0	1.3e-24	87.0	0.0	1.6	1	0	0	1	1	1	1	Helicase	C-terminal	domain
ResIII	PF04851.10	gi|568163046|ref|YP_008946353.1|	-	8.2e-10	38.8	0.3	3.4e-07	30.2	0.2	3.2	2	1	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
DEAD	PF00270.24	gi|568163046|ref|YP_008946353.1|	-	1.1e-05	24.9	0.0	0.037	13.5	0.0	3.6	3	1	0	4	4	4	2	DEAD/DEAH	box	helicase
MCM	PF00493.18	gi|568163046|ref|YP_008946353.1|	-	0.0038	16.0	0.8	0.0063	15.3	0.5	1.2	1	0	0	1	1	1	1	MCM2/3/5	family
AAA_22	PF13401.1	gi|568163046|ref|YP_008946353.1|	-	0.013	15.6	1.0	1	9.5	0.3	3.2	2	1	1	3	3	3	0	AAA	domain
PhoH	PF02562.11	gi|568163046|ref|YP_008946353.1|	-	0.028	13.6	0.1	0.39	9.9	0.0	2.6	4	0	0	4	4	4	0	PhoH-like	protein
Thioredoxin_3	PF13192.1	gi|568163047|ref|YP_008946354.1|	-	2.7e-09	36.6	0.0	5.8e-09	35.6	0.0	1.6	1	0	0	1	1	1	1	Thioredoxin	domain
Thioredoxin_4	PF13462.1	gi|568163047|ref|YP_008946354.1|	-	0.0016	18.4	0.0	0.0042	17.1	0.0	1.7	1	0	0	1	1	1	1	Thioredoxin
Glutaredoxin	PF00462.19	gi|568163047|ref|YP_008946354.1|	-	0.0098	15.8	0.0	0.038	13.9	0.0	2.1	1	1	0	1	1	1	1	Glutaredoxin
DUF3870	PF12986.2	gi|568163047|ref|YP_008946354.1|	-	0.06	13.6	0.1	0.14	12.4	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3870)
TusA	PF01206.12	gi|568163048|ref|YP_008946355.1|	-	3.5e-05	23.3	0.0	4.6e-05	22.9	0.0	1.3	1	1	0	1	1	1	1	Sulfurtransferase	TusA
DUF3006	PF11213.3	gi|568163048|ref|YP_008946355.1|	-	0.12	12.1	0.1	0.18	11.5	0.1	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3006)
Sod_Fe_C	PF02777.13	gi|568163049|ref|YP_008946356.1|	-	6.6e-41	138.4	0.5	1e-40	137.8	0.3	1.2	1	0	0	1	1	1	1	Iron/manganese	superoxide	dismutases,	C-terminal	domain
Sod_Fe_N	PF00081.17	gi|568163049|ref|YP_008946356.1|	-	1.5e-29	102.0	0.1	1.5e-29	102.0	0.1	1.7	2	0	0	2	2	2	1	Iron/manganese	superoxide	dismutases,	alpha-hairpin	domain
NTP_transferase	PF00483.18	gi|568163050|ref|YP_008946357.1|	-	1.6e-34	119.3	0.0	2.1e-34	118.9	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|568163050|ref|YP_008946357.1|	-	3.6e-11	43.4	0.0	4.9e-11	42.9	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep	PF00132.19	gi|568163050|ref|YP_008946357.1|	-	2.2e-08	33.2	10.8	9.8e-05	21.6	0.2	2.9	2	1	0	2	2	2	2	Bacterial	transferase	hexapeptide	(six	repeats)
IspD	PF01128.14	gi|568163050|ref|YP_008946357.1|	-	0.0038	16.7	0.0	0.0078	15.7	0.0	1.5	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
Fucokinase	PF07959.7	gi|568163050|ref|YP_008946357.1|	-	0.038	12.5	0.1	0.079	11.5	0.0	1.6	1	0	0	1	1	1	0	L-fucokinase
FecR	PF04773.8	gi|568164744|ref|YP_008946358.1|	-	0.027	14.7	0.0	0.37	11.0	0.0	2.2	2	0	0	2	2	2	0	FecR	protein
Thioredox_DsbH	PF03190.10	gi|568163051|ref|YP_008946359.1|	-	2.3e-62	209.5	0.0	3.9e-62	208.7	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF255
Thioredoxin_7	PF13899.1	gi|568163051|ref|YP_008946359.1|	-	1.5e-17	63.3	0.1	4.5e-17	61.8	0.1	1.9	1	0	0	1	1	1	1	Thioredoxin-like
Thioredoxin_2	PF13098.1	gi|568163051|ref|YP_008946359.1|	-	2e-07	31.1	0.0	6.6e-07	29.5	0.0	1.9	1	1	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin	PF00085.15	gi|568163051|ref|YP_008946359.1|	-	6.6e-06	25.7	0.2	1.4e-05	24.6	0.2	1.5	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_8	PF13905.1	gi|568163051|ref|YP_008946359.1|	-	0.0073	16.4	0.1	0.35	11.0	0.0	2.8	2	0	0	2	2	2	1	Thioredoxin-like
adh_short_C2	PF13561.1	gi|568163052|ref|YP_008946360.1|	-	6.6e-16	58.7	0.1	1.4e-15	57.7	0.0	1.5	1	1	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|568163052|ref|YP_008946360.1|	-	1.2e-13	51.3	0.1	1.5e-13	50.9	0.1	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|568163052|ref|YP_008946360.1|	-	0.00011	21.8	0.1	0.00017	21.3	0.1	1.2	1	0	0	1	1	1	1	KR	domain
NAD_binding_10	PF13460.1	gi|568163052|ref|YP_008946360.1|	-	0.0002	21.4	0.0	0.00034	20.6	0.0	1.4	1	1	0	1	1	1	1	NADH(P)-binding
ADH_zinc_N	PF00107.21	gi|568163052|ref|YP_008946360.1|	-	0.13	11.7	0.4	16	5.0	0.1	2.6	2	1	0	2	2	2	0	Zinc-binding	dehydrogenase
DUF91	PF01939.11	gi|568163053|ref|YP_008946361.1|	-	1.4e-59	201.0	0.0	1.6e-59	200.8	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF91
Cas_Cas4	PF01930.12	gi|568163053|ref|YP_008946361.1|	-	0.00024	21.0	0.1	0.0006	19.7	0.0	1.7	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF83
UPF0102	PF02021.12	gi|568163053|ref|YP_008946361.1|	-	0.058	13.3	0.0	0.11	12.4	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0102
PDDEXK_1	PF12705.2	gi|568163053|ref|YP_008946361.1|	-	0.12	11.7	0.0	0.14	11.4	0.0	1.2	1	0	0	1	1	1	0	PD-(D/E)XK	nuclease	superfamily
Glycos_transf_2	PF00535.21	gi|568163054|ref|YP_008946362.1|	-	3.2e-20	72.4	0.0	4.9e-20	71.8	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.1	gi|568163054|ref|YP_008946362.1|	-	2.3e-14	53.0	0.0	3.7e-14	52.3	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_tranf_2_3	PF13641.1	gi|568163054|ref|YP_008946362.1|	-	1.6e-12	47.7	0.1	5.4e-12	45.9	0.1	1.6	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
DUF2602	PF10782.4	gi|568163054|ref|YP_008946362.1|	-	0.25	11.2	0.9	0.37	10.6	0.1	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2602)
UPF0154	PF03672.8	gi|568164745|ref|YP_008946363.1|	-	0.12	12.0	0.3	0.12	12.0	0.2	2.3	2	1	0	2	2	2	0	Uncharacterised	protein	family	(UPF0154)
DUF3040	PF11239.3	gi|568164745|ref|YP_008946363.1|	-	1	9.4	4.4	11	6.2	0.3	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3040)
DUF1600	PF07667.6	gi|568164745|ref|YP_008946363.1|	-	3.3	7.8	11.1	0.14	12.2	4.0	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1600)
7TMR-HDED	PF07697.6	gi|568163055|ref|YP_008946364.1|	-	0.0085	15.8	5.7	0.012	15.3	3.9	1.3	1	0	0	1	1	1	1	7TM-HD	extracellular
DUF4404	PF14357.1	gi|568163055|ref|YP_008946364.1|	-	0.022	15.1	2.9	0.34	11.3	2.0	2.2	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4404)
H-kinase_dim	PF02895.9	gi|568163055|ref|YP_008946364.1|	-	0.068	13.5	2.2	0.15	12.4	1.6	1.5	1	0	0	1	1	1	0	Signal	transducing	histidine	kinase,	homodimeric	domain
IncA	PF04156.9	gi|568163055|ref|YP_008946364.1|	-	0.13	11.8	3.9	0.18	11.4	2.7	1.1	1	0	0	1	1	1	0	IncA	protein
Fib_alpha	PF08702.5	gi|568163055|ref|YP_008946364.1|	-	0.22	11.6	5.9	0.35	10.9	4.1	1.3	1	0	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
TIP120	PF08623.5	gi|568163055|ref|YP_008946364.1|	-	0.26	10.8	2.8	0.34	10.4	1.9	1.3	1	0	0	1	1	1	0	TATA-binding	protein	interacting	(TIP20)
GOLD_2	PF13897.1	gi|568163055|ref|YP_008946364.1|	-	0.28	11.3	1.5	0.35	11.0	0.2	1.6	1	1	1	2	2	2	0	Golgi-dynamics	membrane-trafficking
DUF1664	PF07889.7	gi|568163055|ref|YP_008946364.1|	-	0.56	10.0	4.0	1.6	8.5	2.7	1.8	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
Peptidase_C6	PF00851.13	gi|568163055|ref|YP_008946364.1|	-	0.77	8.3	4.1	1	7.9	2.9	1.0	1	0	0	1	1	1	0	Helper	component	proteinase
CbiA	PF01656.18	gi|568163056|ref|YP_008946365.1|	-	1.8e-27	96.0	0.1	2.2e-27	95.7	0.1	1.1	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
MipZ	PF09140.6	gi|568163056|ref|YP_008946365.1|	-	4.2e-12	45.7	0.0	5.2e-12	45.4	0.0	1.2	1	0	0	1	1	1	1	ATPase	MipZ
AAA_31	PF13614.1	gi|568163056|ref|YP_008946365.1|	-	2.7e-10	40.4	0.0	2e-06	27.8	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
ArsA_ATPase	PF02374.10	gi|568163056|ref|YP_008946365.1|	-	1.4e-06	27.6	0.1	0.00014	20.9	0.1	2.2	2	0	0	2	2	2	2	Anion-transporting	ATPase
ParA	PF10609.4	gi|568163056|ref|YP_008946365.1|	-	0.0052	16.6	0.1	0.0092	15.8	0.1	1.4	1	0	0	1	1	1	1	ParA/MinD	ATPase	like
Fer4_NifH	PF00142.13	gi|568163056|ref|YP_008946365.1|	-	0.016	14.4	0.1	0.036	13.2	0.1	1.6	1	0	0	1	1	1	0	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
YhjQ	PF06564.7	gi|568163056|ref|YP_008946365.1|	-	0.044	13.1	0.0	2.3	7.5	0.0	2.1	2	0	0	2	2	2	0	YhjQ	protein
RuvB_N	PF05496.7	gi|568163056|ref|YP_008946365.1|	-	0.075	12.0	0.4	0.18	10.8	0.0	1.8	2	1	1	3	3	3	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
VirC1	PF07015.6	gi|568163056|ref|YP_008946365.1|	-	0.12	11.4	0.1	0.21	10.6	0.0	1.4	1	0	0	1	1	1	0	VirC1	protein
CCG	PF02754.11	gi|568163057|ref|YP_008946366.1|	-	1.7e-13	50.4	0.2	2.2e-05	24.3	0.1	2.6	2	0	0	2	2	2	2	Cysteine-rich	domain
Fer4_8	PF13183.1	gi|568163057|ref|YP_008946366.1|	-	2e-11	43.7	6.0	4.5e-11	42.6	4.1	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|568163057|ref|YP_008946366.1|	-	5.9e-10	39.3	7.0	1.2e-09	38.3	4.8	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|568163057|ref|YP_008946366.1|	-	9e-10	38.7	5.2	1.9e-09	37.6	3.6	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|568163057|ref|YP_008946366.1|	-	4.7e-07	29.1	11.0	0.0012	18.3	1.4	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|568163057|ref|YP_008946366.1|	-	2.1e-06	27.4	7.7	2.5e-05	23.9	6.1	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|568163057|ref|YP_008946366.1|	-	3.5e-06	26.6	10.9	0.011	15.6	1.7	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|568163057|ref|YP_008946366.1|	-	3.2e-05	24.2	9.1	0.022	15.1	0.6	2.5	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|568163057|ref|YP_008946366.1|	-	6.6e-05	23.1	10.2	0.0007	19.8	7.3	2.4	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|568163057|ref|YP_008946366.1|	-	0.00035	20.6	12.3	0.1	13.0	1.8	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|568163057|ref|YP_008946366.1|	-	0.00079	19.1	13.5	0.011	15.5	1.5	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|568163057|ref|YP_008946366.1|	-	0.015	15.7	16.1	0.74	10.5	2.6	2.8	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|568163057|ref|YP_008946366.1|	-	0.028	15.1	10.2	0.69	10.6	7.5	2.4	1	1	1	2	2	2	0	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.1	gi|568163057|ref|YP_008946366.1|	-	0.15	11.9	12.9	2.1	8.2	9.1	2.4	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|568163057|ref|YP_008946366.1|	-	0.25	11.9	3.4	12	6.5	0.2	2.4	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.1	gi|568163057|ref|YP_008946366.1|	-	1.2	9.5	5.1	12	6.3	0.2	2.4	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
FAD-oxidase_C	PF02913.14	gi|568163058|ref|YP_008946367.1|	-	6.6e-51	173.0	0.0	9.4e-51	172.5	0.0	1.2	1	0	0	1	1	1	1	FAD	linked	oxidases,	C-terminal	domain
FAD_binding_4	PF01565.18	gi|568163058|ref|YP_008946367.1|	-	4.5e-29	100.7	0.2	6.6e-29	100.1	0.1	1.3	1	0	0	1	1	1	1	FAD	binding	domain
FAD_binding_4	PF01565.18	gi|568163059|ref|YP_008946368.1|	-	1.5e-17	63.3	0.0	2.3e-17	62.7	0.0	1.3	1	0	0	1	1	1	1	FAD	binding	domain
TPP_enzyme_C	PF02775.16	gi|568163060|ref|YP_008946369.1|	-	1.1e-32	112.6	0.4	5.7e-32	110.4	0.0	1.9	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
PFO_beta_C	PF12367.3	gi|568163060|ref|YP_008946369.1|	-	1.5e-15	56.8	1.0	5.7e-15	54.9	0.7	1.9	1	1	0	1	1	1	1	Pyruvate	ferredoxin	oxidoreductase	beta	subunit	C	terminal
POR_N	PF01855.14	gi|568163061|ref|YP_008946370.1|	-	1.7e-62	210.9	0.1	1.5e-61	207.8	0.0	2.1	2	0	0	2	2	2	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
POR	PF01558.13	gi|568163061|ref|YP_008946370.1|	-	4.1e-34	117.9	0.6	1.1e-33	116.5	0.4	1.7	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
TPP_enzyme_N	PF02776.13	gi|568163061|ref|YP_008946370.1|	-	0.0004	19.9	1.3	0.0052	16.2	0.7	2.4	2	1	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
DUF552	PF04472.7	gi|568163062|ref|YP_008946371.1|	-	0.018	14.9	0.0	0.071	13.0	0.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF552)
CN_hydrolase	PF00795.17	gi|568163063|ref|YP_008946372.1|	-	5.9e-12	45.3	0.0	3.2e-11	42.9	0.0	1.9	1	1	0	1	1	1	1	Carbon-nitrogen	hydrolase
CBS	PF00571.23	gi|568163064|ref|YP_008946373.1|	-	5.9e-44	147.6	3.9	3e-13	49.3	0.0	4.3	4	0	0	4	4	4	4	CBS	domain
Ribosomal_S30AE	PF02482.14	gi|568163064|ref|YP_008946373.1|	-	5.9e-07	29.8	2.7	1.6e-06	28.4	1.8	1.8	1	1	0	1	1	1	1	Sigma	54	modulation	protein	/	S30EA	ribosomal	protein
Hist_deacetyl	PF00850.14	gi|568163065|ref|YP_008946374.1|	-	1.2e-73	248.1	0.0	1.5e-73	247.8	0.0	1.0	1	0	0	1	1	1	1	Histone	deacetylase	domain
ATP-grasp	PF02222.17	gi|568163066|ref|YP_008946375.1|	-	5.2e-43	146.3	0.1	1e-42	145.4	0.1	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|568163066|ref|YP_008946375.1|	-	4.1e-20	72.2	0.1	9.7e-20	71.0	0.0	1.6	2	0	0	2	2	2	1	ATP-grasp	domain
CPSase_L_D2	PF02786.12	gi|568163066|ref|YP_008946375.1|	-	4.5e-11	42.4	0.1	1.3e-10	40.9	0.0	1.7	2	0	0	2	2	2	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Dala_Dala_lig_C	PF07478.8	gi|568163066|ref|YP_008946375.1|	-	1e-10	41.3	0.1	2.1e-10	40.3	0.0	1.5	1	0	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
ATPgrasp_Ter	PF15632.1	gi|568163066|ref|YP_008946375.1|	-	5.4e-09	35.2	0.1	3.9e-06	25.8	0.1	2.1	2	0	0	2	2	2	2	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp_3	PF02655.9	gi|568163066|ref|YP_008946375.1|	-	5.4e-07	29.6	0.4	2.6e-06	27.3	0.3	2.0	1	1	0	1	1	1	1	ATP-grasp	domain
RimK	PF08443.6	gi|568163066|ref|YP_008946375.1|	-	1.1e-06	28.2	0.3	0.00016	21.1	0.0	2.9	3	0	0	3	3	3	1	RimK-like	ATP-grasp	domain
GARS_A	PF01071.14	gi|568163066|ref|YP_008946375.1|	-	4.6e-06	26.3	0.2	3.9e-05	23.3	0.0	2.2	2	0	0	2	2	2	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
LAP2alpha	PF11560.3	gi|568163066|ref|YP_008946375.1|	-	0.088	11.9	0.0	0.14	11.3	0.0	1.3	1	0	0	1	1	1	0	Lamina-associated	polypeptide	2	alpha
Pyr_redox	PF00070.22	gi|568163066|ref|YP_008946375.1|	-	0.1	13.0	3.0	5.4	7.4	0.2	3.4	2	1	1	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
DUF4143	PF13635.1	gi|568163067|ref|YP_008946376.1|	-	0.018	15.2	0.0	0.032	14.4	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4143)
PRA1	PF03208.14	gi|568163068|ref|YP_008946377.1|	-	3	7.1	9.1	0.056	12.7	0.4	2.3	2	1	1	3	3	3	0	PRA1	family	protein
DAO	PF01266.19	gi|568163071|ref|YP_008946380.1|	-	1.2e-13	50.6	0.0	2.9e-07	29.7	0.0	2.1	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.9	gi|568163071|ref|YP_008946380.1|	-	0.0099	15.7	0.0	0.03	14.1	0.0	1.7	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
ApbA	PF02558.11	gi|568163071|ref|YP_008946380.1|	-	0.014	14.8	0.1	0.051	13.0	0.0	1.8	2	0	0	2	2	2	0	Ketopantoate	reductase	PanE/ApbA
3HCDH_N	PF02737.13	gi|568163071|ref|YP_008946380.1|	-	0.028	14.0	0.0	0.045	13.4	0.0	1.3	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_8	PF13450.1	gi|568163071|ref|YP_008946380.1|	-	0.067	13.2	0.0	0.23	11.4	0.0	1.9	2	0	0	2	2	2	0	NAD(P)-binding	Rossmann-like	domain
TrkA_N	PF02254.13	gi|568163071|ref|YP_008946380.1|	-	0.09	12.7	0.1	0.17	11.8	0.0	1.4	1	0	0	1	1	1	0	TrkA-N	domain
UDPG_MGDP_dh_N	PF03721.9	gi|568163071|ref|YP_008946380.1|	-	0.15	11.4	0.2	0.38	10.1	0.1	1.6	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
MoCF_biosynth	PF00994.19	gi|568163073|ref|YP_008946382.1|	-	8.5e-31	106.2	0.1	9.7e-31	106.1	0.1	1.0	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
B12-binding	PF02310.14	gi|568163073|ref|YP_008946382.1|	-	0.14	12.0	0.0	0.19	11.5	0.0	1.3	1	0	0	1	1	1	0	B12	binding	domain
DUF1286	PF06939.6	gi|568163074|ref|YP_008946383.1|	-	2.1e-41	140.6	5.7	2.8e-41	140.2	3.9	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1286)
DUF457	PF04307.9	gi|568163074|ref|YP_008946383.1|	-	6.3e-05	22.3	10.1	6.9e-05	22.2	3.1	2.0	1	1	1	2	2	2	2	Predicted	membrane-bound	metal-dependent	hydrolase	(DUF457)
DHDPS	PF00701.17	gi|568163076|ref|YP_008946385.1|	-	2e-39	134.9	0.0	2.3e-39	134.7	0.0	1.0	1	0	0	1	1	1	1	Dihydrodipicolinate	synthetase	family
PfkB	PF00294.19	gi|568163077|ref|YP_008946386.1|	-	4.9e-40	137.5	0.0	5.8e-40	137.3	0.0	1.0	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Aldedh	PF00171.17	gi|568163078|ref|YP_008946387.1|	-	2.6e-112	375.5	0.0	3.1e-112	375.2	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
LuxC	PF05893.9	gi|568163078|ref|YP_008946387.1|	-	1.9e-08	33.4	0.0	3.3e-08	32.6	0.0	1.3	1	0	0	1	1	1	1	Acyl-CoA	reductase	(LuxC)
Rieske	PF00355.21	gi|568163079|ref|YP_008946388.1|	-	4.3e-09	35.8	0.0	5.4e-09	35.5	0.0	1.1	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Rieske_2	PF13806.1	gi|568163079|ref|YP_008946388.1|	-	0.013	15.1	0.0	0.016	14.9	0.0	1.1	1	0	0	1	1	1	0	Rieske-like	[2Fe-2S]	domain
PG_binding_2	PF08823.6	gi|568164747|ref|YP_008946390.1|	-	0.024	14.7	0.0	0.077	13.1	0.0	1.8	2	0	0	2	2	2	0	Putative	peptidoglycan	binding	domain
CwfJ_C_2	PF04676.9	gi|568164749|ref|YP_008946392.1|	-	0.1	13.1	0.2	0.12	12.8	0.1	1.1	1	0	0	1	1	1	0	Protein	similar	to	CwfJ	C-terminus	2
DUF2975	PF11188.3	gi|568164750|ref|YP_008946393.1|	-	0.0058	16.3	0.9	0.006	16.3	0.6	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2975)
SecY	PF00344.15	gi|568164750|ref|YP_008946393.1|	-	0.075	11.9	1.2	0.08	11.8	0.8	1.0	1	0	0	1	1	1	0	SecY	translocase
FtsX	PF02687.16	gi|568164750|ref|YP_008946393.1|	-	0.15	11.8	5.9	0.2	11.4	4.1	1.1	1	0	0	1	1	1	0	FtsX-like	permease	family
Clathrin-link	PF09268.5	gi|568164750|ref|YP_008946393.1|	-	0.74	8.9	5.3	4.3	6.4	3.7	2.1	1	1	0	1	1	1	0	Clathrin,	heavy-chain	linker
Linocin_M18	PF04454.7	gi|568163080|ref|YP_008946394.1|	-	4.1e-35	120.8	0.1	5.9e-35	120.3	0.1	1.2	1	0	0	1	1	1	1	Encapsulating	protein	for	peroxidase
Rubrerythrin	PF02915.12	gi|568163080|ref|YP_008946394.1|	-	0.0038	17.5	1.2	0.0038	17.5	0.8	2.1	2	0	0	2	2	2	1	Rubrerythrin
Ferritin	PF00210.19	gi|568163080|ref|YP_008946394.1|	-	0.056	13.1	3.9	0.18	11.5	2.7	1.8	1	1	0	1	1	1	0	Ferritin-like	domain
DUF340	PF03956.8	gi|568163082|ref|YP_008946396.1|	-	1.2e-51	174.7	19.1	1.2e-51	174.7	13.2	2.0	2	0	0	2	2	2	1	Membrane	protein	of	unknown	function	(DUF340)
DUF3270	PF11674.3	gi|568163082|ref|YP_008946396.1|	-	0.64	10.0	5.9	0.27	11.2	0.3	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3270)
MFS_1	PF07690.11	gi|568163083|ref|YP_008946397.1|	-	6.6e-45	153.3	77.9	1.3e-38	132.6	29.1	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
CheC	PF04509.7	gi|568163084|ref|YP_008946398.1|	-	0.073	12.8	0.2	0.12	12.1	0.1	1.4	1	0	0	1	1	1	0	CheC-like	family
PmbA_TldD	PF01523.11	gi|568163085|ref|YP_008946399.1|	-	4.1e-14	52.5	0.0	7.5e-14	51.6	0.0	1.4	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
DUF2778	PF10908.3	gi|568163085|ref|YP_008946399.1|	-	0.051	13.7	0.0	4.5	7.5	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2778)
DUF1827	PF08860.5	gi|568163085|ref|YP_008946399.1|	-	0.091	12.8	0.1	0.2	11.8	0.1	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1827)
adh_short_C2	PF13561.1	gi|568163086|ref|YP_008946400.1|	-	1.1e-34	120.3	0.1	1.4e-34	119.9	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|568163086|ref|YP_008946400.1|	-	3.3e-33	114.9	0.0	4.6e-33	114.5	0.0	1.2	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|568163086|ref|YP_008946400.1|	-	2e-13	50.4	0.0	3e-13	49.8	0.0	1.2	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.16	gi|568163086|ref|YP_008946400.1|	-	3.5e-07	29.8	0.1	6.1e-07	29.1	0.1	1.5	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
3Beta_HSD	PF01073.14	gi|568163086|ref|YP_008946400.1|	-	4e-06	25.7	0.3	5.5e-06	25.2	0.2	1.2	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
NAD_binding_10	PF13460.1	gi|568163086|ref|YP_008946400.1|	-	6.5e-05	23.0	0.0	8.6e-05	22.6	0.0	1.4	1	1	0	1	1	1	1	NADH(P)-binding
NAD_binding_4	PF07993.7	gi|568163086|ref|YP_008946400.1|	-	9e-05	21.5	0.2	0.00016	20.6	0.1	1.5	1	1	0	1	1	1	1	Male	sterility	protein
Polysacc_synt_2	PF02719.10	gi|568163086|ref|YP_008946400.1|	-	0.00031	19.7	0.4	0.00036	19.5	0.3	1.1	1	0	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NmrA	PF05368.8	gi|568163086|ref|YP_008946400.1|	-	0.00085	18.6	0.6	0.0014	17.9	0.4	1.3	1	0	0	1	1	1	1	NmrA-like	family
TrkA_N	PF02254.13	gi|568163086|ref|YP_008946400.1|	-	0.0039	17.1	0.1	0.0093	15.9	0.1	1.7	1	0	0	1	1	1	1	TrkA-N	domain
2-Hacid_dh_C	PF02826.14	gi|568163086|ref|YP_008946400.1|	-	0.011	14.9	0.2	0.025	13.7	0.2	1.7	1	1	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
DFP	PF04127.10	gi|568163086|ref|YP_008946400.1|	-	0.017	14.7	0.4	0.04	13.5	0.3	1.6	1	1	0	1	1	1	0	DNA	/	pantothenate	metabolism	flavoprotein
THF_DHG_CYH_C	PF02882.14	gi|568163086|ref|YP_008946400.1|	-	0.022	13.8	0.2	0.37	9.8	0.2	2.3	1	1	1	2	2	2	0	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
Phage_fiber_C	PF06820.7	gi|568163086|ref|YP_008946400.1|	-	0.12	12.5	0.0	2.9	8.0	0.0	2.3	2	0	0	2	2	2	0	Putative	prophage	tail	fibre	C-terminus
HAD_2	PF13419.1	gi|568163087|ref|YP_008946401.1|	-	1.1e-16	61.6	0.0	1.6e-16	61.0	0.0	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|568163087|ref|YP_008946401.1|	-	1e-05	26.0	0.0	1.2e-05	25.7	0.0	1.4	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|568163087|ref|YP_008946401.1|	-	0.0038	16.8	0.0	0.0064	16.1	0.0	1.4	1	0	0	1	1	1	1	HAD-hyrolase-like
Hydrolase_6	PF13344.1	gi|568163087|ref|YP_008946401.1|	-	0.0097	15.7	0.0	0.022	14.6	0.0	1.7	2	0	0	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
LisH	PF08513.6	gi|568163087|ref|YP_008946401.1|	-	0.038	13.7	0.7	0.038	13.7	0.5	2.8	3	0	0	3	3	3	0	LisH
HAD	PF12710.2	gi|568163087|ref|YP_008946401.1|	-	0.041	14.0	0.0	0.047	13.8	0.0	1.3	1	0	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
Radical_SAM	PF04055.16	gi|568163088|ref|YP_008946402.1|	-	1.3e-19	70.9	0.0	1.1e-17	64.6	0.0	2.8	3	0	0	3	3	3	1	Radical	SAM	superfamily
B12-binding	PF02310.14	gi|568163088|ref|YP_008946402.1|	-	0.00022	21.0	0.0	0.00042	20.1	0.0	1.4	1	0	0	1	1	1	1	B12	binding	domain
DUF3916	PF13079.1	gi|568163088|ref|YP_008946402.1|	-	0.05	13.2	0.4	0.091	12.4	0.2	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3916)
Fer4_14	PF13394.1	gi|568163088|ref|YP_008946402.1|	-	0.083	12.9	0.0	8.9	6.3	0.0	2.4	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Yip1	PF04893.12	gi|568163089|ref|YP_008946403.1|	-	0.28	10.6	25.6	0.45	9.9	17.7	1.3	1	0	0	1	1	1	0	Yip1	domain
DUF3681	PF12442.3	gi|568163089|ref|YP_008946403.1|	-	1.8	8.7	6.8	0.081	13.0	0.9	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3681)
DUF1129	PF06570.6	gi|568163089|ref|YP_008946403.1|	-	3.1	7.0	16.3	22	4.2	11.3	2.0	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1129)
YiaAB	PF05360.9	gi|568163089|ref|YP_008946403.1|	-	4.3	6.9	8.9	0.23	11.0	1.2	2.3	2	2	0	2	2	2	0	yiaA/B	two	helix	domain
Cation_efflux	PF01545.16	gi|568163090|ref|YP_008946404.1|	-	6.3e-41	140.3	14.8	7.1e-41	140.1	10.3	1.0	1	0	0	1	1	1	1	Cation	efflux	family
L6_membrane	PF05805.7	gi|568163090|ref|YP_008946404.1|	-	0.071	12.6	5.5	0.032	13.8	0.8	2.1	1	1	1	2	2	2	0	L6	membrane	protein
Citrate_synt	PF00285.16	gi|568163091|ref|YP_008946405.1|	-	2.6e-99	332.3	0.0	3e-99	332.1	0.0	1.0	1	0	0	1	1	1	1	Citrate	synthase
DUF4325	PF14213.1	gi|568163091|ref|YP_008946405.1|	-	0.056	13.1	0.3	11	5.7	0.0	3.1	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4325)
CBS	PF00571.23	gi|568164751|ref|YP_008946406.1|	-	0.021	14.6	0.0	0.024	14.4	0.0	1.2	1	0	0	1	1	1	0	CBS	domain
FGF	PF00167.13	gi|568164751|ref|YP_008946406.1|	-	0.13	12.0	0.1	0.14	11.9	0.0	1.1	1	0	0	1	1	1	0	Fibroblast	growth	factor
PEP_mutase	PF13714.1	gi|568163092|ref|YP_008946407.1|	-	8.1e-60	201.9	0.1	9.4e-60	201.7	0.1	1.0	1	0	0	1	1	1	1	Phosphoenolpyruvate	phosphomutase
ICL	PF00463.16	gi|568163092|ref|YP_008946407.1|	-	7.1e-17	60.8	1.0	1.4e-16	59.8	0.6	1.4	1	1	0	1	1	1	1	Isocitrate	lyase	family
ComA	PF02679.10	gi|568163092|ref|YP_008946407.1|	-	0.0037	16.3	0.1	0.01	14.8	0.1	1.9	1	1	0	1	1	1	1	(2R)-phospho-3-sulfolactate	synthase	(ComA)
Pantoate_transf	PF02548.10	gi|568163092|ref|YP_008946407.1|	-	0.027	13.5	0.1	0.41	9.7	0.1	2.2	1	1	1	2	2	2	0	Ketopantoate	hydroxymethyltransferase
MmgE_PrpD	PF03972.9	gi|568163093|ref|YP_008946408.1|	-	4.4e-97	325.0	0.0	5.3e-97	324.8	0.0	1.0	1	0	0	1	1	1	1	MmgE/PrpD	family
CPSase_L_D3	PF02787.14	gi|568163093|ref|YP_008946408.1|	-	0.011	15.5	0.1	0.031	14.0	0.0	1.8	2	0	0	2	2	2	0	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
IF2_N	PF04760.10	gi|568163093|ref|YP_008946408.1|	-	0.033	13.8	3.1	0.069	12.8	0.3	2.6	2	0	0	2	2	2	0	Translation	initiation	factor	IF-2,	N-terminal	region
Ldh_1_N	PF00056.18	gi|568163094|ref|YP_008946409.1|	-	1.5e-33	115.6	0.4	2.8e-33	114.7	0.3	1.4	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	NAD	binding	domain
Ldh_1_C	PF02866.13	gi|568163094|ref|YP_008946409.1|	-	3.4e-11	43.1	0.1	5.1e-11	42.6	0.1	1.2	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	alpha/beta	C-terminal	domain
F420_oxidored	PF03807.12	gi|568163094|ref|YP_008946409.1|	-	0.00047	20.5	0.1	0.002	18.5	0.0	2.2	1	1	1	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_2	PF03446.10	gi|568163094|ref|YP_008946409.1|	-	0.00072	19.4	0.0	0.003	17.4	0.0	2.1	1	1	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.18	gi|568163094|ref|YP_008946409.1|	-	0.00087	19.0	0.2	0.0088	15.7	0.0	2.4	2	1	0	3	3	3	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
3HCDH_N	PF02737.13	gi|568163094|ref|YP_008946409.1|	-	0.0018	17.9	0.0	0.0042	16.7	0.0	1.6	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
TrkA_N	PF02254.13	gi|568163094|ref|YP_008946409.1|	-	0.088	12.8	0.3	0.17	11.8	0.0	1.7	2	0	0	2	2	2	0	TrkA-N	domain
RuvA_C	PF07499.8	gi|568163094|ref|YP_008946409.1|	-	0.15	12.2	1.3	0.9	9.7	0.1	2.7	3	1	0	3	3	3	0	RuvA,	C-terminal	domain
2-Hacid_dh_C	PF02826.14	gi|568163095|ref|YP_008946410.1|	-	1.9e-32	111.8	0.0	2.8e-32	111.2	0.0	1.2	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.25	gi|568163095|ref|YP_008946410.1|	-	2.3e-10	40.0	0.0	2.8e-10	39.7	0.0	1.1	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
AdoHcyase_NAD	PF00670.16	gi|568163095|ref|YP_008946410.1|	-	0.0028	17.5	0.0	0.0048	16.7	0.0	1.3	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
CoA_transf_3	PF02515.12	gi|568163095|ref|YP_008946410.1|	-	0.11	11.6	0.0	0.19	10.9	0.0	1.3	1	0	0	1	1	1	0	CoA-transferase	family	III
EVE	PF01878.13	gi|568163096|ref|YP_008946411.1|	-	3.5e-18	66.0	0.0	4e-18	65.8	0.0	1.1	1	0	0	1	1	1	1	EVE	domain
Aminotran_5	PF00266.14	gi|568163097|ref|YP_008946412.1|	-	8.4e-36	123.4	0.0	1.1e-35	123.1	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-V
Nitroreductase	PF00881.19	gi|568163098|ref|YP_008946413.1|	-	1.3e-29	103.0	0.0	1.8e-29	102.6	0.0	1.2	1	0	0	1	1	1	1	Nitroreductase	family
Tmemb_9	PF05434.6	gi|568163098|ref|YP_008946413.1|	-	0.056	13.1	0.9	0.084	12.6	0.6	1.2	1	0	0	1	1	1	0	TMEM9
TM1586_NiRdase	PF14512.1	gi|568163098|ref|YP_008946413.1|	-	0.068	12.3	0.9	5.7	6.0	0.1	2.9	1	1	0	2	2	2	0	Putative	TM	nitroreductase
PspB	PF06667.7	gi|568163098|ref|YP_008946413.1|	-	0.13	12.2	0.2	0.26	11.2	0.2	1.4	1	0	0	1	1	1	0	Phage	shock	protein	B
TraL	PF07178.6	gi|568163099|ref|YP_008946414.1|	-	0.85	9.6	3.0	0.35	10.9	0.4	1.6	1	1	1	2	2	2	0	TraL	protein
Aconitase_C	PF00694.14	gi|568163100|ref|YP_008946415.1|	-	2.1e-22	79.5	0.0	3e-22	79.1	0.0	1.3	1	0	0	1	1	1	1	Aconitase	C-terminal	domain
Aconitase_2_N	PF06434.8	gi|568163100|ref|YP_008946415.1|	-	6.6e-05	22.4	2.1	0.0036	16.7	1.5	2.2	1	1	0	1	1	1	1	Aconitate	hydratase	2	N-terminus
IlvN	PF07991.7	gi|568163100|ref|YP_008946415.1|	-	0.0028	17.0	0.1	0.0041	16.5	0.1	1.2	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
Sipho_tail	PF05709.6	gi|568163100|ref|YP_008946415.1|	-	0.02	14.0	0.0	0.021	13.9	0.0	1.0	1	0	0	1	1	1	0	Phage	tail	protein
Aconitase	PF00330.15	gi|568163101|ref|YP_008946416.1|	-	5e-68	229.6	0.2	1.7e-41	142.1	0.0	2.3	1	1	1	2	2	2	2	Aconitase	family	(aconitate	hydratase)
DUF521	PF04412.8	gi|568163101|ref|YP_008946416.1|	-	0.0006	18.4	0.0	0.001	17.7	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF521)
TatC	PF00902.13	gi|568163102|ref|YP_008946417.1|	-	1.5e-45	155.2	23.0	1.9e-45	154.8	15.9	1.2	1	0	0	1	1	1	1	Sec-independent	protein	translocase	protein	(TatC)
ATG16	PF08614.6	gi|568164752|ref|YP_008946418.1|	-	0.0037	17.1	1.7	0.0047	16.7	1.2	1.2	1	0	0	1	1	1	1	Autophagy	protein	16	(ATG16)
SAB	PF04382.8	gi|568164752|ref|YP_008946418.1|	-	0.0043	16.7	2.6	0.041	13.5	0.1	2.4	2	0	0	2	2	2	1	SAB	domain
DUF632	PF04782.7	gi|568164752|ref|YP_008946418.1|	-	0.0058	15.7	0.2	0.0085	15.2	0.2	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF632)
DUF939_C	PF11728.3	gi|568164752|ref|YP_008946418.1|	-	0.013	15.3	5.0	0.036	13.8	2.8	1.8	1	1	1	2	2	2	0	DUF939	C-terminal	domain
GAS	PF13851.1	gi|568164752|ref|YP_008946418.1|	-	0.014	14.6	9.5	0.019	14.1	6.6	1.1	1	0	0	1	1	1	0	Growth-arrest	specific	micro-tubule	binding
FlxA	PF14282.1	gi|568164752|ref|YP_008946418.1|	-	0.017	15.0	3.1	0.022	14.7	0.2	2.0	1	1	1	2	2	2	0	FlxA-like	protein
IncA	PF04156.9	gi|568164752|ref|YP_008946418.1|	-	0.018	14.6	1.9	0.53	9.8	0.3	2.1	2	0	0	2	2	2	0	IncA	protein
Syntaxin-6_N	PF09177.6	gi|568164752|ref|YP_008946418.1|	-	0.019	15.3	5.3	0.037	14.4	3.7	1.4	1	1	0	1	1	1	0	Syntaxin	6,	N-terminal
HSBP1	PF06825.7	gi|568164752|ref|YP_008946418.1|	-	0.02	14.4	1.4	0.025	14.1	0.2	1.7	2	0	0	2	2	1	0	Heat	shock	factor	binding	protein	1
DUF4455	PF14643.1	gi|568164752|ref|YP_008946418.1|	-	0.03	12.9	2.2	0.046	12.3	1.6	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4455)
YcbB	PF08664.5	gi|568164752|ref|YP_008946418.1|	-	0.043	13.5	2.0	0.26	11.0	1.4	1.9	1	1	0	1	1	1	0	YcbB	domain
Fib_alpha	PF08702.5	gi|568164752|ref|YP_008946418.1|	-	0.045	13.8	6.5	0.061	13.4	4.5	1.1	1	0	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
Mu-like_Pro	PF10123.4	gi|568164752|ref|YP_008946418.1|	-	0.047	13.1	0.3	0.058	12.8	0.2	1.1	1	0	0	1	1	1	0	Mu-like	prophage	I	protein
Vps51	PF08700.6	gi|568164752|ref|YP_008946418.1|	-	0.05	13.4	1.4	1.4	8.8	0.2	2.3	2	0	0	2	2	2	0	Vps51/Vps67
CENP-F_leu_zip	PF10473.4	gi|568164752|ref|YP_008946418.1|	-	0.061	13.1	5.5	0.19	11.5	0.6	2.2	2	0	0	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
MCPsignal	PF00015.16	gi|568164752|ref|YP_008946418.1|	-	0.065	12.7	0.8	0.1	12.1	0.6	1.4	1	1	0	1	1	1	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
DHHA2	PF02833.9	gi|568164752|ref|YP_008946418.1|	-	0.083	13.0	0.4	1.4	9.0	0.0	2.1	2	0	0	2	2	2	0	DHHA2	domain
DUF2383	PF09537.5	gi|568164752|ref|YP_008946418.1|	-	0.084	13.1	0.4	0.27	11.4	0.1	1.7	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF2383)
Cob_adeno_trans	PF01923.13	gi|568164752|ref|YP_008946418.1|	-	0.088	12.5	0.4	0.13	12.0	0.3	1.3	1	0	0	1	1	1	0	Cobalamin	adenosyltransferase
DUF3338	PF11819.3	gi|568164752|ref|YP_008946418.1|	-	0.09	12.2	1.9	0.48	9.8	0.0	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3338)
FliT	PF05400.8	gi|568164752|ref|YP_008946418.1|	-	0.13	12.6	1.4	1.2	9.5	0.2	2.1	2	0	0	2	2	2	0	Flagellar	protein	FliT
AAA_13	PF13166.1	gi|568164752|ref|YP_008946418.1|	-	0.14	10.5	7.2	0.17	10.2	5.0	1.0	1	0	0	1	1	1	0	AAA	domain
Snapin_Pallidin	PF14712.1	gi|568164752|ref|YP_008946418.1|	-	0.15	12.3	6.5	0.75	10.1	0.3	2.1	1	1	0	2	2	2	0	Snapin/Pallidin
HR1	PF02185.11	gi|568164752|ref|YP_008946418.1|	-	0.16	11.7	3.7	0.18	11.5	0.2	2.2	2	0	0	2	2	2	0	Hr1	repeat
FliD_C	PF07195.7	gi|568164752|ref|YP_008946418.1|	-	0.16	11.2	5.0	2	7.6	0.7	2.0	1	1	1	2	2	2	0	Flagellar	hook-associated	protein	2	C-terminus
Mst1_SARAH	PF11629.3	gi|568164752|ref|YP_008946418.1|	-	0.17	11.7	3.7	5.2	6.9	0.1	2.4	2	0	0	2	2	2	0	C	terminal	SARAH	domain	of	Mst1
Mt_ATP-synt_D	PF05873.7	gi|568164752|ref|YP_008946418.1|	-	0.17	11.5	3.1	0.32	10.6	2.1	1.5	1	1	0	1	1	1	0	ATP	synthase	D	chain,	mitochondrial	(ATP5H)
TMF_DNA_bd	PF12329.3	gi|568164752|ref|YP_008946418.1|	-	0.2	11.5	9.5	0.32	10.8	1.3	2.2	2	0	0	2	2	2	0	TATA	element	modulatory	factor	1	DNA	binding
UPF0449	PF15136.1	gi|568164752|ref|YP_008946418.1|	-	0.21	11.7	2.0	1.6	9.0	0.1	2.1	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0449
Prefoldin	PF02996.12	gi|568164752|ref|YP_008946418.1|	-	0.23	11.0	8.0	1.3	8.6	0.7	2.1	2	0	0	2	2	2	0	Prefoldin	subunit
Occludin_ELL	PF07303.8	gi|568164752|ref|YP_008946418.1|	-	0.24	12.1	6.2	2.4	8.9	0.5	2.3	1	1	0	2	2	2	0	Occludin	homology	domain
Sugarporin_N	PF11471.3	gi|568164752|ref|YP_008946418.1|	-	0.26	10.9	5.3	0.7	9.5	3.7	1.6	1	0	0	1	1	1	0	Maltoporin	periplasmic	N-terminal	extension
Laminin_II	PF06009.7	gi|568164752|ref|YP_008946418.1|	-	0.32	10.7	4.4	0.49	10.1	3.0	1.4	1	1	0	1	1	1	0	Laminin	Domain	II
Med21	PF11221.3	gi|568164752|ref|YP_008946418.1|	-	0.33	10.9	6.4	3.6	7.5	0.3	2.1	2	0	0	2	2	2	0	Subunit	21	of	Mediator	complex
FadA	PF09403.5	gi|568164752|ref|YP_008946418.1|	-	0.35	10.8	5.4	0.6	10.1	3.8	1.4	1	1	0	1	1	1	0	Adhesion	protein	FadA
Tropomyosin_1	PF12718.2	gi|568164752|ref|YP_008946418.1|	-	0.38	10.5	8.3	0.47	10.3	5.7	1.1	1	0	0	1	1	1	0	Tropomyosin	like
Phage_GP20	PF06810.6	gi|568164752|ref|YP_008946418.1|	-	0.42	10.0	7.9	0.37	10.2	1.2	2.1	1	1	1	2	2	2	0	Phage	minor	structural	protein	GP20
bZIP_1	PF00170.16	gi|568164752|ref|YP_008946418.1|	-	0.45	10.5	8.5	2.4	8.1	1.8	2.2	2	0	0	2	2	2	0	bZIP	transcription	factor
Rad50_zn_hook	PF04423.9	gi|568164752|ref|YP_008946418.1|	-	0.52	9.8	5.2	0.47	9.9	0.4	2.4	2	0	0	2	2	2	0	Rad50	zinc	hook	motif
V_ATPase_I	PF01496.14	gi|568164752|ref|YP_008946418.1|	-	0.58	7.9	5.0	0.86	7.3	3.5	1.2	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
DUF904	PF06005.7	gi|568164752|ref|YP_008946418.1|	-	0.6	10.4	10.1	1.8	8.9	1.7	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF904)
DivIC	PF04977.10	gi|568164752|ref|YP_008946418.1|	-	0.81	9.2	11.4	1.1	8.7	1.9	2.2	1	1	0	2	2	2	0	Septum	formation	initiator
Prefoldin_2	PF01920.15	gi|568164752|ref|YP_008946418.1|	-	1.1	9.0	9.6	5.9	6.7	6.7	1.9	1	1	0	1	1	1	0	Prefoldin	subunit
WD40_alt	PF14077.1	gi|568164752|ref|YP_008946418.1|	-	1.1	8.9	7.1	0.12	11.9	0.7	2.3	2	1	1	3	3	2	0	Alternative	WD40	repeat	motif
Lzipper-MIP1	PF14389.1	gi|568164752|ref|YP_008946418.1|	-	1.5	8.9	6.5	43	4.3	4.3	2.1	1	1	1	2	2	2	0	Leucine-zipper	of	ternary	complex	factor	MIP1
FYVE_2	PF02318.11	gi|568164752|ref|YP_008946418.1|	-	1.5	8.7	4.2	5.1	7.0	0.3	2.1	2	0	0	2	2	2	0	FYVE-type	zinc	finger
THP2	PF09432.5	gi|568164752|ref|YP_008946418.1|	-	1.8	8.4	6.1	5.2	6.9	0.2	2.1	1	1	1	2	2	2	0	Tho	complex	subunit	THP2
Pox_A_type_inc	PF04508.7	gi|568164752|ref|YP_008946418.1|	-	2	8.4	12.2	0.41	10.5	1.7	2.8	3	0	0	3	3	2	0	Viral	A-type	inclusion	protein	repeat
CENP-Q	PF13094.1	gi|568164752|ref|YP_008946418.1|	-	2.4	8.1	7.4	1.6	8.7	0.9	2.1	1	1	1	2	2	2	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
Spc24	PF08286.6	gi|568164752|ref|YP_008946418.1|	-	3.3	7.4	10.2	5.2	6.7	1.6	2.1	1	1	1	2	2	2	0	Spc24	subunit	of	Ndc80
DUF972	PF06156.8	gi|568164752|ref|YP_008946418.1|	-	4.4	7.6	7.4	15	6.0	0.3	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF972)
SRPRB	PF09439.5	gi|568164752|ref|YP_008946418.1|	-	4.8	6.3	6.0	5	6.2	0.5	2.1	1	1	1	2	2	2	0	Signal	recognition	particle	receptor	beta	subunit
TSC22	PF01166.13	gi|568164752|ref|YP_008946418.1|	-	5.9	6.9	7.8	1	9.3	0.7	2.4	2	1	0	2	2	2	0	TSC-22/dip/bun	family
bZIP_2	PF07716.10	gi|568164752|ref|YP_008946418.1|	-	6.9	6.5	8.9	0.65	9.8	1.4	2.3	2	0	0	2	2	2	0	Basic	region	leucine	zipper
DUF2951	PF11166.3	gi|568164752|ref|YP_008946418.1|	-	7.5	6.4	8.5	5.9	6.8	0.7	2.1	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2951)
MttA_Hcf106	PF02416.11	gi|568163103|ref|YP_008946419.1|	-	9.4e-12	43.8	6.8	5.5e-11	41.4	4.7	2.0	1	1	0	1	1	1	1	mttA/Hcf106	family
DUF4446	PF14584.1	gi|568163103|ref|YP_008946419.1|	-	0.00065	19.5	1.2	0.00081	19.2	0.8	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4446)
DUF4391	PF14335.1	gi|568163103|ref|YP_008946419.1|	-	0.016	14.5	1.9	0.018	14.4	1.3	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4391)
DUF3573	PF12097.3	gi|568163103|ref|YP_008946419.1|	-	0.017	13.7	0.8	0.017	13.7	0.5	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3573)
Transposase_22	PF02994.9	gi|568163103|ref|YP_008946419.1|	-	0.019	13.4	2.1	0.021	13.3	1.5	1.0	1	0	0	1	1	1	0	L1	transposable	element
OmpH	PF03938.9	gi|568163103|ref|YP_008946419.1|	-	0.03	14.2	7.5	0.031	14.1	5.2	1.2	1	0	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
SGT1	PF07093.6	gi|568163103|ref|YP_008946419.1|	-	0.064	11.6	3.2	0.064	11.6	2.2	1.0	1	0	0	1	1	1	0	SGT1	protein
DUF607	PF04678.8	gi|568163103|ref|YP_008946419.1|	-	0.1	12.5	0.6	0.098	12.5	0.4	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF607
FemAB	PF02388.11	gi|568163103|ref|YP_008946419.1|	-	0.12	10.9	3.4	0.13	10.9	2.4	1.1	1	0	0	1	1	1	0	FemAB	family
V-SNARE	PF05008.10	gi|568163103|ref|YP_008946419.1|	-	0.17	12.0	8.8	0.21	11.7	6.1	1.1	1	0	0	1	1	1	0	Vesicle	transport	v-SNARE	protein	N-terminus
V_ATPase_I	PF01496.14	gi|568163103|ref|YP_008946419.1|	-	0.27	9.0	2.9	0.31	8.8	2.0	1.2	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
DUF572	PF04502.8	gi|568163103|ref|YP_008946419.1|	-	0.4	9.8	7.4	0.42	9.7	5.1	1.0	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF572)
AAA_23	PF13476.1	gi|568163103|ref|YP_008946419.1|	-	0.51	10.6	5.4	0.58	10.4	3.7	1.1	1	0	0	1	1	1	0	AAA	domain
HR1	PF02185.11	gi|568163103|ref|YP_008946419.1|	-	0.66	9.7	12.9	2.3	8.0	9.0	1.8	1	1	0	1	1	1	0	Hr1	repeat
DUF972	PF06156.8	gi|568163103|ref|YP_008946419.1|	-	0.73	10.2	5.1	0.89	9.9	3.5	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF972)
Seryl_tRNA_N	PF02403.17	gi|568163103|ref|YP_008946419.1|	-	1.1	9.2	9.6	9.3	6.3	6.7	1.9	1	1	0	1	1	1	0	Seryl-tRNA	synthetase	N-terminal	domain
Phage_GPO	PF05929.6	gi|568163103|ref|YP_008946419.1|	-	1.5	7.9	5.2	1.6	7.9	3.6	1.0	1	0	0	1	1	1	0	Phage	capsid	scaffolding	protein	(GPO)	serine	peptidase
DUF3373	PF11853.3	gi|568163103|ref|YP_008946419.1|	-	1.7	7.1	7.5	1.9	6.9	5.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3373)
DUF4407	PF14362.1	gi|568163103|ref|YP_008946419.1|	-	3.6	6.4	7.8	4.6	6.0	5.4	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
DivIC	PF04977.10	gi|568163103|ref|YP_008946419.1|	-	3.9	7.0	11.2	7.5	6.1	7.8	1.5	1	0	0	1	1	1	0	Septum	formation	initiator
DUF2681	PF10883.3	gi|568163103|ref|YP_008946419.1|	-	4	7.7	13.6	0.95	9.7	4.7	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2681)
Ribosomal_L29	PF00831.18	gi|568163103|ref|YP_008946419.1|	-	4.8	6.9	13.4	0.35	10.5	4.2	2.1	1	1	1	2	2	2	0	Ribosomal	L29	protein
Spc24	PF08286.6	gi|568163103|ref|YP_008946419.1|	-	6.3	6.5	10.4	13	5.5	6.5	1.9	1	1	1	2	2	2	0	Spc24	subunit	of	Ndc80
OPA3	PF07047.7	gi|568163103|ref|YP_008946419.1|	-	6.6	6.5	10.2	10	5.8	7.1	1.6	1	1	0	1	1	1	0	Optic	atrophy	3	protein	(OPA3)
ABC_tran	PF00005.22	gi|568163104|ref|YP_008946420.1|	-	1.4e-30	106.3	0.0	2e-30	105.8	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|568163104|ref|YP_008946420.1|	-	1.3e-09	38.4	1.0	0.00014	21.9	0.0	2.2	1	1	1	2	2	2	2	AAA	domain
DUF258	PF03193.11	gi|568163104|ref|YP_008946420.1|	-	0.00029	20.0	0.0	0.00053	19.2	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_15	PF13175.1	gi|568163104|ref|YP_008946420.1|	-	0.00049	19.2	0.9	0.045	12.8	0.2	2.2	1	1	1	2	2	2	1	AAA	ATPase	domain
AAA_16	PF13191.1	gi|568163104|ref|YP_008946420.1|	-	0.0012	18.8	0.1	0.0046	16.9	0.0	1.8	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_23	PF13476.1	gi|568163104|ref|YP_008946420.1|	-	0.0067	16.7	0.1	0.011	16.0	0.1	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|568163104|ref|YP_008946420.1|	-	0.0079	15.7	0.0	0.016	14.7	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.1	gi|568163104|ref|YP_008946420.1|	-	0.021	14.9	0.1	0.14	12.2	0.0	2.1	2	1	0	2	2	2	0	AAA	domain
SMC_N	PF02463.14	gi|568163104|ref|YP_008946420.1|	-	0.023	13.9	0.3	4.9	6.3	0.1	2.1	2	0	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
AAA_17	PF13207.1	gi|568163104|ref|YP_008946420.1|	-	0.023	15.5	1.0	0.049	14.4	0.7	2.0	1	1	0	1	1	1	0	AAA	domain
Rad17	PF03215.10	gi|568163104|ref|YP_008946420.1|	-	0.037	12.7	0.0	0.047	12.3	0.0	1.3	1	1	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
MobB	PF03205.9	gi|568163104|ref|YP_008946420.1|	-	0.04	13.6	0.1	0.091	12.4	0.1	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ABC_ATPase	PF09818.4	gi|568163104|ref|YP_008946420.1|	-	0.044	12.3	0.1	3.7	6.0	0.0	2.7	2	1	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
NB-ARC	PF00931.17	gi|568163104|ref|YP_008946420.1|	-	0.056	12.2	0.0	0.1	11.4	0.0	1.3	1	0	0	1	1	1	0	NB-ARC	domain
NACHT	PF05729.7	gi|568163104|ref|YP_008946420.1|	-	0.077	12.6	0.4	0.26	10.9	0.1	1.9	2	0	0	2	2	2	0	NACHT	domain
MutS_V	PF00488.16	gi|568163104|ref|YP_008946420.1|	-	0.085	12.2	0.0	0.14	11.5	0.0	1.2	1	0	0	1	1	1	0	MutS	domain	V
AAA_18	PF13238.1	gi|568163104|ref|YP_008946420.1|	-	0.11	12.7	0.0	0.27	11.5	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
BPD_transp_1	PF00528.17	gi|568163105|ref|YP_008946421.1|	-	9.2e-24	83.9	56.6	2.9e-15	56.2	12.3	3.2	2	1	1	3	3	3	2	Binding-protein-dependent	transport	system	inner	membrane	component
UPF0154	PF03672.8	gi|568163105|ref|YP_008946421.1|	-	0.11	12.1	3.8	0.93	9.1	0.4	2.8	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0154)
CPSase_L_D2	PF02786.12	gi|568163106|ref|YP_008946422.1|	-	3.9e-60	202.7	0.0	6.1e-60	202.1	0.0	1.3	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
CPSase_L_chain	PF00289.17	gi|568163106|ref|YP_008946422.1|	-	9.2e-44	148.0	0.2	1.7e-43	147.1	0.1	1.5	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
Biotin_carb_C	PF02785.14	gi|568163106|ref|YP_008946422.1|	-	4e-33	113.5	0.0	7.6e-33	112.7	0.0	1.5	1	0	0	1	1	1	1	Biotin	carboxylase	C-terminal	domain
ATPgrasp_Ter	PF15632.1	gi|568163106|ref|YP_008946422.1|	-	1.4e-10	40.4	0.0	2.7e-10	39.5	0.0	1.5	1	1	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp_4	PF13535.1	gi|568163106|ref|YP_008946422.1|	-	9.2e-10	38.5	0.0	2.1e-09	37.3	0.0	1.6	1	0	0	1	1	1	1	ATP-grasp	domain
Dala_Dala_lig_C	PF07478.8	gi|568163106|ref|YP_008946422.1|	-	1.4e-05	24.5	0.0	2.7e-05	23.6	0.0	1.4	1	0	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
ATP-grasp	PF02222.17	gi|568163106|ref|YP_008946422.1|	-	5.5e-05	22.5	0.2	0.00025	20.4	0.0	2.0	2	0	0	2	2	2	1	ATP-grasp	domain
RimK	PF08443.6	gi|568163106|ref|YP_008946422.1|	-	0.00049	19.6	0.0	0.0015	18.0	0.0	1.8	2	0	0	2	2	2	1	RimK-like	ATP-grasp	domain
ATP-grasp_3	PF02655.9	gi|568163106|ref|YP_008946422.1|	-	0.0008	19.2	0.0	0.0023	17.8	0.0	1.8	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_5	PF13549.1	gi|568163106|ref|YP_008946422.1|	-	0.044	12.9	0.0	0.26	10.4	0.0	2.1	2	0	0	2	2	2	0	ATP-grasp	domain
Oxidored_nitro	PF00148.14	gi|568163106|ref|YP_008946422.1|	-	0.1	11.2	0.0	0.16	10.5	0.0	1.3	1	0	0	1	1	1	0	Nitrogenase	component	1	type	Oxidoreductase
Biotin_lipoyl	PF00364.17	gi|568163107|ref|YP_008946423.1|	-	7.9e-19	67.0	6.9	2.3e-18	65.6	2.1	2.5	2	0	0	2	2	2	1	Biotin-requiring	enzyme
Biotin_lipoyl_2	PF13533.1	gi|568163107|ref|YP_008946423.1|	-	3.7e-17	61.7	9.4	2.6e-09	36.5	0.2	2.8	2	1	1	3	3	3	2	Biotin-lipoyl	like
HlyD	PF00529.15	gi|568163107|ref|YP_008946423.1|	-	1.3e-10	41.0	6.8	2.1e-06	27.2	0.1	2.5	2	1	1	3	3	3	2	HlyD	family	secretion	protein
HlyD_2	PF12700.2	gi|568163107|ref|YP_008946423.1|	-	1.5e-09	37.4	3.2	6.1e-06	25.6	0.2	2.4	1	1	1	2	2	2	2	HlyD	family	secretion	protein
HlyD_3	PF13437.1	gi|568163107|ref|YP_008946423.1|	-	9.8e-08	32.2	2.4	0.0015	18.7	0.0	3.1	3	0	0	3	3	3	2	HlyD	family	secretion	protein
RnfC_N	PF13375.1	gi|568163107|ref|YP_008946423.1|	-	0.00067	19.3	2.3	0.003	17.2	1.6	2.0	1	1	0	1	1	1	1	RnfC	Barrel	sandwich	hybrid	domain
PYNP_C	PF07831.8	gi|568163107|ref|YP_008946423.1|	-	0.0007	19.0	0.5	0.18	11.2	0.0	2.5	1	1	1	2	2	2	2	Pyrimidine	nucleoside	phosphorylase	C-terminal	domain
PTS_EIIA_1	PF00358.15	gi|568163107|ref|YP_008946423.1|	-	0.0022	17.5	0.8	0.19	11.2	0.0	3.3	1	1	3	4	4	4	1	phosphoenolpyruvate-dependent	sugar	phosphotransferase	system,	EIIA	1
NQRA	PF05896.6	gi|568163107|ref|YP_008946423.1|	-	0.0077	15.4	0.5	0.02	14.1	0.2	1.7	1	1	1	2	2	2	1	Na(+)-translocating	NADH-quinone	reductase	subunit	A	(NQRA)
QRPTase_N	PF02749.11	gi|568163107|ref|YP_008946423.1|	-	0.015	15.0	0.2	1.2	9.0	0.0	3.2	1	1	1	3	3	3	0	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
Peptidase_M23	PF01551.17	gi|568163107|ref|YP_008946423.1|	-	0.029	14.4	1.4	0.93	9.5	0.9	2.9	1	1	0	1	1	1	0	Peptidase	family	M23
YqfD	PF06898.6	gi|568163107|ref|YP_008946423.1|	-	0.031	12.9	2.8	0.76	8.4	0.1	2.1	1	1	1	2	2	2	0	Putative	stage	IV	sporulation	protein	YqfD
DUF2118	PF09891.4	gi|568163107|ref|YP_008946423.1|	-	0.064	12.9	1.5	0.19	11.4	0.4	2.2	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2118)
GCV_H	PF01597.14	gi|568163107|ref|YP_008946423.1|	-	0.074	12.7	2.9	0.078	12.6	0.2	2.3	2	1	0	3	3	3	0	Glycine	cleavage	H-protein
DUF1815	PF08844.5	gi|568163107|ref|YP_008946423.1|	-	0.13	11.9	0.0	0.31	10.6	0.0	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1815)
Carboxyl_trans	PF01039.17	gi|568163108|ref|YP_008946424.1|	-	2.8e-189	629.5	0.6	3.2e-189	629.3	0.4	1.0	1	0	0	1	1	1	1	Carboxyl	transferase	domain
MdcE	PF06833.6	gi|568163108|ref|YP_008946424.1|	-	0.00016	20.9	0.0	0.00043	19.5	0.0	1.7	2	0	0	2	2	2	1	Malonate	decarboxylase	gamma	subunit	(MdcE)
DEAD	PF00270.24	gi|568163109|ref|YP_008946425.1|	-	2.5e-28	98.6	0.0	1.4e-26	92.9	0.0	2.8	3	0	0	3	3	3	1	DEAD/DEAH	box	helicase
ResIII	PF04851.10	gi|568163109|ref|YP_008946425.1|	-	6.4e-09	35.8	0.0	7e-08	32.5	0.0	2.4	2	1	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.26	gi|568163109|ref|YP_008946425.1|	-	1e-08	34.9	0.1	2.2e-08	33.8	0.1	1.5	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
HHH_5	PF14520.1	gi|568163109|ref|YP_008946425.1|	-	0.0003	20.8	0.6	0.0015	18.6	0.2	2.4	2	0	0	2	2	2	1	Helix-hairpin-helix	domain
DNA_pol_lambd_f	PF10391.4	gi|568163109|ref|YP_008946425.1|	-	0.0046	16.4	0.0	0.015	14.7	0.0	1.9	2	0	0	2	2	2	1	Fingers	domain	of	DNA	polymerase	lambda
SNF2_N	PF00176.18	gi|568163109|ref|YP_008946425.1|	-	0.021	13.6	0.0	0.036	12.8	0.0	1.4	1	0	0	1	1	1	0	SNF2	family	N-terminal	domain
KaiC	PF06745.8	gi|568163109|ref|YP_008946425.1|	-	0.046	12.8	0.0	0.11	11.6	0.0	1.5	1	0	0	1	1	1	0	KaiC
HHH	PF00633.18	gi|568163109|ref|YP_008946425.1|	-	0.072	12.8	0.0	0.24	11.1	0.0	1.9	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
RHH_1	PF01402.16	gi|568163110|ref|YP_008946426.1|	-	1.1e-08	34.5	0.1	1.9e-08	33.8	0.0	1.4	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
DUF2191	PF09957.4	gi|568163110|ref|YP_008946426.1|	-	0.06	13.1	0.2	0.15	11.8	0.1	1.7	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2191)
PHO4	PF01384.15	gi|568163111|ref|YP_008946427.1|	-	1.4e-35	122.5	37.6	2.2e-35	121.8	26.1	1.3	1	0	0	1	1	1	1	Phosphate	transporter	family
PhoU_div	PF01865.11	gi|568163112|ref|YP_008946428.1|	-	8.2e-12	44.7	11.9	1.2e-11	44.1	8.2	1.3	1	1	0	1	1	1	1	Protein	of	unknown	function	DUF47
DUF763	PF05559.6	gi|568163113|ref|YP_008946429.1|	-	3.2e-132	440.3	0.0	3.7e-132	440.1	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF763)
CLAG	PF03805.8	gi|568163113|ref|YP_008946429.1|	-	0.12	9.7	1.5	0.16	9.2	1.0	1.1	1	0	0	1	1	1	0	Cytoadherence-linked	asexual	protein
Metallophos_2	PF12850.2	gi|568163114|ref|YP_008946430.1|	-	1.5e-09	37.8	0.0	2.3e-09	37.2	0.0	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|568163114|ref|YP_008946430.1|	-	6e-05	22.5	0.0	6e-05	22.5	0.0	1.4	2	0	0	2	2	2	1	Calcineurin-like	phosphoesterase
OrfB_Zn_ribbon	PF07282.6	gi|568163115|ref|YP_008946431.1|	-	9.2e-20	70.0	0.0	1.7e-19	69.2	0.0	1.5	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
DZR	PF12773.2	gi|568163115|ref|YP_008946431.1|	-	0.0086	15.8	0.2	0.015	15.1	0.1	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
OrfB_IS605	PF01385.14	gi|568163115|ref|YP_008946431.1|	-	0.01	15.2	0.0	0.016	14.5	0.0	1.3	1	0	0	1	1	1	0	Probable	transposase
zinc_ribbon_2	PF13240.1	gi|568163115|ref|YP_008946431.1|	-	0.01	15.2	1.6	1.3	8.6	0.1	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
PhnA_Zn_Ribbon	PF08274.7	gi|568163115|ref|YP_008946431.1|	-	0.045	13.5	0.5	0.58	9.9	0.0	2.2	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
zf-ribbon_3	PF13248.1	gi|568163115|ref|YP_008946431.1|	-	0.23	10.6	6.7	1.9	7.8	0.6	2.1	1	1	1	2	2	2	0	zinc-ribbon	domain
UPF0547	PF10571.4	gi|568163115|ref|YP_008946431.1|	-	0.33	10.7	3.5	10	5.8	0.1	2.4	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
GATase_4	PF13230.1	gi|568163116|ref|YP_008946432.1|	-	5.3e-09	35.1	0.0	6.5e-09	34.8	0.0	1.1	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
GATase_6	PF13522.1	gi|568163116|ref|YP_008946432.1|	-	2.4e-07	30.7	0.0	5.6e-07	29.5	0.0	1.6	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
Lactamase_B_2	PF12706.2	gi|568163117|ref|YP_008946433.1|	-	3.1e-19	69.2	0.1	3.8e-19	68.9	0.0	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|568163117|ref|YP_008946433.1|	-	1.8e-11	44.0	1.3	1.6e-10	40.9	0.9	1.9	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_3	PF13483.1	gi|568163117|ref|YP_008946433.1|	-	3.7e-05	23.4	0.0	5.7e-05	22.8	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
PDEase_II	PF02112.10	gi|568163117|ref|YP_008946433.1|	-	0.24	10.2	2.6	8.3	5.2	0.6	2.5	2	1	1	3	3	3	0	cAMP	phosphodiesterases	class-II
PfkB	PF00294.19	gi|568163118|ref|YP_008946434.1|	-	1.9e-51	175.0	0.2	4.6e-51	173.7	0.1	1.5	1	1	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Phos_pyr_kin	PF08543.7	gi|568163118|ref|YP_008946434.1|	-	1.2e-08	34.4	0.0	1.8e-08	33.8	0.0	1.2	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
Carb_kinase	PF01256.12	gi|568163118|ref|YP_008946434.1|	-	0.02	14.1	0.0	0.03	13.6	0.0	1.2	1	0	0	1	1	1	0	Carbohydrate	kinase
Phos_pyr_kin	PF08543.7	gi|568163119|ref|YP_008946435.1|	-	9.6e-83	277.1	0.4	1.6e-82	276.3	0.3	1.4	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
PfkB	PF00294.19	gi|568163119|ref|YP_008946435.1|	-	1.1e-14	54.2	0.1	2.1e-14	53.3	0.0	1.4	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Carb_kinase	PF01256.12	gi|568163119|ref|YP_008946435.1|	-	3.5e-08	33.0	1.2	5.9e-08	32.2	0.8	1.5	1	1	0	1	1	1	1	Carbohydrate	kinase
PDDEXK_1	PF12705.2	gi|568163120|ref|YP_008946436.1|	-	2.4e-13	50.0	1.6	2.5e-09	36.8	1.0	2.7	1	1	1	2	2	2	2	PD-(D/E)XK	nuclease	superfamily
Cas_Cas4	PF01930.12	gi|568163120|ref|YP_008946436.1|	-	7.6e-10	38.9	0.1	9.5e-10	38.6	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF83
PDDEXK_3	PF13366.1	gi|568163120|ref|YP_008946436.1|	-	8.6e-08	32.2	0.1	1.7e-07	31.2	0.1	1.5	1	0	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
Chordopox_G2	PF05796.7	gi|568163120|ref|YP_008946436.1|	-	0.023	13.8	0.0	0.033	13.3	0.0	1.4	1	0	0	1	1	1	0	Chordopoxvirus	protein	G2
Glyco_tranf_2_3	PF13641.1	gi|568163121|ref|YP_008946437.1|	-	2.6e-42	145.1	0.0	4.5e-42	144.4	0.0	1.3	2	0	0	2	2	2	1	Glycosyltransferase	like	family	2
Glycos_transf_2	PF00535.21	gi|568163121|ref|YP_008946437.1|	-	1.9e-30	105.7	0.2	2.6e-30	105.3	0.2	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_trans_2_3	PF13632.1	gi|568163121|ref|YP_008946437.1|	-	1.4e-24	86.8	0.4	2.2e-24	86.2	0.3	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_transf_21	PF13506.1	gi|568163121|ref|YP_008946437.1|	-	8.5e-14	51.2	0.0	1.9e-13	50.1	0.0	1.5	2	0	0	2	2	2	1	Glycosyl	transferase	family	21
Glyco_tranf_2_2	PF10111.4	gi|568163121|ref|YP_008946437.1|	-	3.9e-13	49.1	0.0	5.7e-13	48.5	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.1	gi|568163121|ref|YP_008946437.1|	-	0.00022	21.4	0.0	0.00039	20.6	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
GNT-I	PF03071.10	gi|568163121|ref|YP_008946437.1|	-	0.001	17.7	0.1	0.0014	17.2	0.0	1.1	1	0	0	1	1	1	1	GNT-I	family
DUF3392	PF11872.3	gi|568163121|ref|YP_008946437.1|	-	0.015	15.2	1.8	0.032	14.1	1.3	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3392)
DUF3363	PF11843.3	gi|568163121|ref|YP_008946437.1|	-	0.033	12.8	0.0	0.043	12.4	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3363)
DUF3464	PF11947.3	gi|568163121|ref|YP_008946437.1|	-	5.8	6.3	5.9	0.66	9.4	1.0	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3464)
Lactamase_B_2	PF12706.2	gi|568163123|ref|YP_008946439.1|	-	9e-09	35.1	0.1	1.2e-08	34.7	0.1	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|568163123|ref|YP_008946439.1|	-	2.1e-08	34.0	0.2	3.2e-07	30.2	0.1	2.2	2	0	0	2	2	2	1	Metallo-beta-lactamase	superfamily
Lactamase_B_3	PF13483.1	gi|568163123|ref|YP_008946439.1|	-	4.6e-07	29.6	0.0	6.8e-07	29.1	0.0	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
DHH	PF01368.15	gi|568163123|ref|YP_008946439.1|	-	0.094	12.3	3.3	0.52	9.9	0.0	2.3	1	1	0	2	2	2	0	DHH	family
VIT1	PF01988.14	gi|568163124|ref|YP_008946440.1|	-	2.8e-52	177.2	5.6	3.2e-52	177.1	3.9	1.0	1	0	0	1	1	1	1	VIT	family
DUF2207	PF09972.4	gi|568163124|ref|YP_008946440.1|	-	0.0035	16.0	2.0	0.0044	15.6	1.4	1.3	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2207)
AAA_assoc_C	PF09821.4	gi|568163125|ref|YP_008946441.1|	-	1.5e-31	109.1	0.0	2.1e-31	108.6	0.0	1.2	1	0	0	1	1	1	1	C-terminal	AAA-associated	domain
Glyco_hydro_80	PF13647.1	gi|568163125|ref|YP_008946441.1|	-	0.0047	16.2	0.0	0.0064	15.8	0.0	1.1	1	0	0	1	1	1	1	Glycosyl	hydrolase	family	80	of	chitosanase	A
QueC	PF06508.8	gi|568163126|ref|YP_008946442.1|	-	1.2e-59	201.1	0.0	1.8e-59	200.5	0.0	1.2	1	0	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
GATase_7	PF13537.1	gi|568163126|ref|YP_008946442.1|	-	1e-13	51.0	0.0	2.5e-13	49.8	0.0	1.7	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_6	PF13522.1	gi|568163126|ref|YP_008946442.1|	-	1.6e-11	44.2	0.0	3.5e-11	43.1	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
ThiI	PF02568.9	gi|568163126|ref|YP_008946442.1|	-	6.4e-09	35.5	0.1	2.5e-08	33.6	0.0	2.1	1	1	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
Asn_synthase	PF00733.16	gi|568163126|ref|YP_008946442.1|	-	1.2e-05	24.9	0.0	2.4e-05	23.9	0.0	1.4	1	0	0	1	1	1	1	Asparagine	synthase
tRNA_Me_trans	PF03054.11	gi|568163126|ref|YP_008946442.1|	-	1.4e-05	23.8	0.0	4.3e-05	22.2	0.0	1.8	2	0	0	2	2	2	1	tRNA	methyl	transferase
ATP_bind_3	PF01171.15	gi|568163126|ref|YP_008946442.1|	-	8e-05	22.2	0.0	0.00013	21.5	0.0	1.3	1	0	0	1	1	1	1	PP-loop	family
GATase_2	PF00310.16	gi|568163126|ref|YP_008946442.1|	-	0.00068	18.4	0.0	0.17	10.5	0.0	2.5	1	1	1	2	2	2	2	Glutamine	amidotransferases	class-II
DEAD	PF00270.24	gi|568163127|ref|YP_008946443.1|	-	1.6e-26	92.7	0.0	5.8e-26	90.9	0.0	1.9	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|568163127|ref|YP_008946443.1|	-	4e-16	58.6	0.0	5.5e-15	54.9	0.0	2.7	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
DUF1998	PF09369.5	gi|568163127|ref|YP_008946443.1|	-	4e-12	46.5	0.2	1.3e-11	44.8	0.1	2.0	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1998)
ResIII	PF04851.10	gi|568163127|ref|YP_008946443.1|	-	9.6e-06	25.5	0.0	5.3e-05	23.1	0.0	2.2	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
SecA_DEAD	PF07517.9	gi|568163127|ref|YP_008946443.1|	-	1.9e-05	24.1	0.0	3.4e-05	23.2	0.0	1.3	1	0	0	1	1	1	1	SecA	DEAD-like	domain
AAA_19	PF13245.1	gi|568163127|ref|YP_008946443.1|	-	0.0081	15.8	0.0	0.019	14.6	0.0	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
TauE	PF01925.14	gi|568163128|ref|YP_008946444.1|	-	5.3e-42	143.9	25.1	6.5e-42	143.6	17.4	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
DUF1634	PF07843.6	gi|568163129|ref|YP_008946445.1|	-	4.2e-28	97.0	10.2	4.8e-28	96.8	7.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1634)
DUF3098	PF11297.3	gi|568163129|ref|YP_008946445.1|	-	0.017	14.8	0.0	0.017	14.8	0.0	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3098)
UPF0121	PF03661.8	gi|568163129|ref|YP_008946445.1|	-	0.017	14.3	0.1	0.017	14.3	0.1	1.9	1	1	1	2	2	2	0	Uncharacterised	protein	family	(UPF0121)
Tetraspannin	PF00335.15	gi|568163129|ref|YP_008946445.1|	-	0.29	10.3	9.3	0.4	9.9	6.4	1.2	1	0	0	1	1	1	0	Tetraspanin	family
NKAIN	PF05640.9	gi|568163129|ref|YP_008946445.1|	-	2.7	6.9	9.4	0.085	11.8	2.6	1.5	2	0	0	2	2	2	0	Na,K-Atpase	Interacting	protein
DUF3493	PF11998.3	gi|568163130|ref|YP_008946447.1|	-	0.11	12.3	1.7	2.7	7.9	0.7	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3493)
Fig1	PF12351.3	gi|568163130|ref|YP_008946447.1|	-	0.6	9.9	6.6	0.5	10.2	2.8	1.8	1	1	1	2	2	2	0	Ca2+	regulator	and	membrane	fusion	protein	Fig1
SecE	PF00584.15	gi|568163130|ref|YP_008946447.1|	-	0.95	9.0	8.4	6.2	6.4	0.1	2.5	2	0	0	2	2	2	0	SecE/Sec61-gamma	subunits	of	protein	translocation	complex
Tetraspannin	PF00335.15	gi|568163130|ref|YP_008946447.1|	-	1.7	7.8	7.5	2.9	7.1	5.2	1.3	1	0	0	1	1	1	0	Tetraspanin	family
Pox_A14	PF05767.7	gi|568163130|ref|YP_008946447.1|	-	4.3	7.3	7.9	1.2	9.1	3.2	1.9	2	0	0	2	2	2	0	Poxvirus	virion	envelope	protein	A14
SNARE_assoc	PF09335.6	gi|568163131|ref|YP_008946448.1|	-	3e-17	62.9	6.3	3e-17	62.9	4.4	1.8	2	0	0	2	2	2	1	SNARE	associated	Golgi	protein
DUF1981	PF09324.5	gi|568164754|ref|YP_008946449.1|	-	0.09	12.3	0.1	0.15	11.6	0.0	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1981)
CBS	PF00571.23	gi|568163132|ref|YP_008946450.1|	-	1.5e-29	101.5	5.4	3.8e-14	52.2	0.3	2.0	2	0	0	2	2	2	2	CBS	domain
IF3_N	PF05198.11	gi|568163132|ref|YP_008946450.1|	-	0.13	12.2	0.3	1.2	9.1	0.1	2.3	2	0	0	2	2	2	0	Translation	initiation	factor	IF-3,	N-terminal	domain
Arch_ATPase	PF01637.13	gi|568163133|ref|YP_008946451.1|	-	1.1e-08	35.0	0.1	2.1e-08	34.1	0.0	1.4	1	0	0	1	1	1	1	Archaeal	ATPase
AAA_14	PF13173.1	gi|568163133|ref|YP_008946451.1|	-	2.2e-05	24.3	0.0	4.6e-05	23.3	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|568163133|ref|YP_008946451.1|	-	0.0011	19.1	0.1	0.0034	17.5	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
PhoH	PF02562.11	gi|568163133|ref|YP_008946451.1|	-	0.06	12.5	0.0	0.097	11.8	0.0	1.3	1	0	0	1	1	1	0	PhoH-like	protein
RuvA_C	PF07499.8	gi|568163133|ref|YP_008946451.1|	-	0.065	13.4	0.0	0.14	12.2	0.0	1.7	1	0	0	1	1	1	0	RuvA,	C-terminal	domain
ETF	PF01012.16	gi|568163134|ref|YP_008946452.1|	-	7e-29	100.6	0.0	9.3e-29	100.2	0.0	1.1	1	0	0	1	1	1	1	Electron	transfer	flavoprotein	domain
ETF_alpha	PF00766.14	gi|568163135|ref|YP_008946453.1|	-	7.9e-32	108.7	1.0	1e-30	105.1	0.1	2.6	2	1	1	3	3	3	1	Electron	transfer	flavoprotein	FAD-binding	domain
ETF	PF01012.16	gi|568163135|ref|YP_008946453.1|	-	5.6e-10	39.1	0.0	9.8e-10	38.3	0.0	1.4	1	0	0	1	1	1	1	Electron	transfer	flavoprotein	domain
Oxidored_nitro	PF00148.14	gi|568163135|ref|YP_008946453.1|	-	0.0099	14.5	0.0	0.016	13.8	0.0	1.3	1	0	0	1	1	1	1	Nitrogenase	component	1	type	Oxidoreductase
Usp	PF00582.21	gi|568163135|ref|YP_008946453.1|	-	0.041	14.0	0.7	0.45	10.7	0.0	2.6	3	0	0	3	3	3	0	Universal	stress	protein	family
Cadherin-like	PF12733.2	gi|568163135|ref|YP_008946453.1|	-	0.056	13.7	0.5	0.15	12.3	0.3	1.7	1	0	0	1	1	1	0	Cadherin-like	beta	sandwich	domain
DUF2244	PF10003.4	gi|568163135|ref|YP_008946453.1|	-	0.11	11.8	0.0	0.19	11.0	0.0	1.3	1	0	0	1	1	1	0	Integral	membrane	protein	(DUF2244)
DAO	PF01266.19	gi|568163136|ref|YP_008946454.1|	-	5.4e-19	68.3	0.3	1.4e-08	34.0	0.1	2.3	1	1	1	2	2	2	2	FAD	dependent	oxidoreductase
FAD_oxidored	PF12831.2	gi|568163136|ref|YP_008946454.1|	-	4.7e-15	55.5	0.0	7.9e-15	54.8	0.0	1.3	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|568163136|ref|YP_008946454.1|	-	7.3e-12	44.8	0.6	1.2e-11	44.1	0.4	1.3	1	0	0	1	1	1	1	FAD	binding	domain
HI0933_like	PF03486.9	gi|568163136|ref|YP_008946454.1|	-	1.1e-09	37.3	0.2	3e-09	35.8	0.0	1.8	2	1	0	2	2	2	1	HI0933-like	protein
Pyr_redox_3	PF13738.1	gi|568163136|ref|YP_008946454.1|	-	1.3e-09	38.3	0.0	2.3e-09	37.6	0.0	1.4	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|568163136|ref|YP_008946454.1|	-	2.4e-07	30.1	0.1	6.1e-07	28.8	0.1	1.6	1	1	0	1	1	1	1	FAD	binding	domain
NAD_binding_8	PF13450.1	gi|568163136|ref|YP_008946454.1|	-	7.2e-07	29.1	2.7	1.3e-05	25.1	1.4	2.9	3	0	0	3	3	3	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_2	PF07992.9	gi|568163136|ref|YP_008946454.1|	-	2e-06	27.8	1.6	2.5e-06	27.5	0.6	1.8	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Trp_halogenase	PF04820.9	gi|568163136|ref|YP_008946454.1|	-	3.1e-06	26.1	2.1	0.00016	20.4	0.0	2.8	2	1	1	3	3	3	1	Tryptophan	halogenase
Thi4	PF01946.12	gi|568163136|ref|YP_008946454.1|	-	6.3e-06	25.4	1.3	1.4e-05	24.3	0.7	1.6	2	0	0	2	2	2	1	Thi4	family
Lycopene_cycl	PF05834.7	gi|568163136|ref|YP_008946454.1|	-	1.7e-05	23.9	0.1	0.017	14.0	0.2	2.1	2	0	0	2	2	2	2	Lycopene	cyclase	protein
GIDA	PF01134.17	gi|568163136|ref|YP_008946454.1|	-	2.2e-05	23.5	1.0	4.4e-05	22.5	0.7	1.5	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
Pyr_redox	PF00070.22	gi|568163136|ref|YP_008946454.1|	-	0.00044	20.5	2.4	0.0025	18.1	0.6	2.8	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
Fer4_11	PF13247.1	gi|568163137|ref|YP_008946455.1|	-	9.1e-09	35.1	0.6	1.1e-08	34.8	0.4	1.1	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|568163137|ref|YP_008946455.1|	-	1.3e-07	31.8	22.0	3.9e-05	23.9	4.5	2.2	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|568163137|ref|YP_008946455.1|	-	6.6e-07	29.5	6.5	9.7e-07	28.9	4.5	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|568163137|ref|YP_008946455.1|	-	1.4e-06	28.0	6.7	1.7e-06	27.6	4.6	1.1	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|568163137|ref|YP_008946455.1|	-	0.00013	21.7	11.5	0.0025	17.6	1.8	2.9	2	1	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_20	PF14691.1	gi|568163137|ref|YP_008946455.1|	-	0.00034	20.2	5.0	0.0085	15.7	1.3	2.0	1	1	1	2	2	2	2	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_2	PF12797.2	gi|568163137|ref|YP_008946455.1|	-	0.002	17.9	11.5	0.0047	16.7	2.0	2.5	2	1	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|568163137|ref|YP_008946455.1|	-	0.0035	17.3	2.2	1.2	9.1	0.3	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|568163137|ref|YP_008946455.1|	-	0.005	16.6	8.0	0.12	12.2	5.9	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|568163137|ref|YP_008946455.1|	-	0.036	14.6	13.8	0.12	13.0	1.1	2.2	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|568163137|ref|YP_008946455.1|	-	0.066	13.5	4.8	1.9	8.8	1.2	2.1	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|568163137|ref|YP_008946455.1|	-	0.076	12.6	15.4	0.36	10.5	1.8	4.0	3	1	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|568163137|ref|YP_008946455.1|	-	0.39	11.1	13.2	0.3	11.5	1.9	2.9	2	1	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|568163137|ref|YP_008946455.1|	-	0.46	11.2	6.6	11	6.8	1.6	2.2	1	1	1	2	2	2	0	4Fe-4S	double	cluster	binding	domain
GCC2_GCC3	PF07699.8	gi|568163137|ref|YP_008946455.1|	-	2.2	7.9	8.1	18	5.0	5.6	2.6	1	1	0	1	1	1	0	GCC2	and	GCC3
Phosphorylase	PF00343.15	gi|568163138|ref|YP_008946456.1|	-	8.7e-09	33.8	0.1	2.2e-08	32.4	0.0	1.6	2	0	0	2	2	2	1	Carbohydrate	phosphorylase
Glycos_transf_1	PF00534.15	gi|568163138|ref|YP_008946456.1|	-	1.7e-08	34.0	0.0	3.8e-08	32.9	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|568163138|ref|YP_008946456.1|	-	0.00012	22.2	0.0	0.00028	21.0	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
MFS_1	PF07690.11	gi|568163139|ref|YP_008946457.1|	-	2.2e-27	95.7	49.9	5.5e-21	74.6	15.5	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|568163139|ref|YP_008946457.1|	-	8e-08	31.2	16.0	8e-08	31.2	11.1	2.1	1	1	0	2	2	2	1	Sugar	(and	other)	transporter
MFS_1_like	PF12832.2	gi|568163139|ref|YP_008946457.1|	-	6.9e-06	25.7	1.5	0.0013	18.4	0.1	3.4	2	0	0	2	2	2	2	MFS_1	like	family
MFS_3	PF05977.8	gi|568163139|ref|YP_008946457.1|	-	0.041	12.0	7.6	0.67	7.9	1.0	2.2	2	0	0	2	2	2	0	Transmembrane	secretion	effector
ATP-synt_S1	PF05827.7	gi|568163139|ref|YP_008946457.1|	-	0.069	12.4	0.4	0.15	11.3	0.3	1.5	1	0	0	1	1	1	0	Vacuolar	ATP	synthase	subunit	S1	(ATP6S1)
DUF3463	PF11946.3	gi|568163140|ref|YP_008946459.1|	-	1.7e-30	105.4	2.3	2.5e-30	104.8	1.6	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3463)
Radical_SAM	PF04055.16	gi|568163140|ref|YP_008946459.1|	-	2.1e-16	60.5	0.0	5.7e-16	59.1	0.0	1.7	1	1	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|568163140|ref|YP_008946459.1|	-	1.6e-08	34.7	1.1	7e-07	29.4	0.0	2.6	3	0	0	3	3	3	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|568163140|ref|YP_008946459.1|	-	7.6e-06	25.9	0.0	5.1e-05	23.2	0.0	2.1	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
MraZ	PF02381.13	gi|568163140|ref|YP_008946459.1|	-	0.064	13.0	0.0	0.14	11.9	0.0	1.5	1	0	0	1	1	1	0	MraZ	protein
DUF161	PF02588.10	gi|568164756|ref|YP_008946460.1|	-	0.032	14.5	7.6	0.032	14.5	5.3	2.0	1	1	1	2	2	2	0	Uncharacterized	BCR,	YitT	family	COG1284
ECF-ribofla_trS	PF07155.7	gi|568164756|ref|YP_008946460.1|	-	0.042	13.5	4.5	0.056	13.1	3.1	1.3	1	1	0	1	1	1	0	ECF-type	riboflavin	transporter,	S	component
DUF3816	PF12822.2	gi|568164756|ref|YP_008946460.1|	-	2.1	8.2	16.4	2.6	7.9	11.4	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3816)
NicO	PF03824.11	gi|568164756|ref|YP_008946460.1|	-	9	5.5	9.5	11	5.2	6.6	1.0	1	0	0	1	1	1	0	High-affinity	nickel-transport	protein
ALO	PF04030.9	gi|568164757|ref|YP_008946461.1|	-	0.054	13.0	0.0	6.8	6.2	0.0	2.1	2	0	0	2	2	2	0	D-arabinono-1,4-lactone	oxidase
FAD_binding_4	PF01565.18	gi|568163141|ref|YP_008946462.1|	-	3.1e-43	146.5	0.0	6.3e-43	145.5	0.0	1.6	1	0	0	1	1	1	1	FAD	binding	domain
FAD-oxidase_C	PF02913.14	gi|568163141|ref|YP_008946462.1|	-	3.5e-42	144.4	0.0	4.6e-42	144.0	0.0	1.2	1	0	0	1	1	1	1	FAD	linked	oxidases,	C-terminal	domain
CTP_transf_2	PF01467.21	gi|568163142|ref|YP_008946463.1|	-	1.1e-13	51.5	0.0	1.5e-13	51.0	0.0	1.2	1	0	0	1	1	1	1	Cytidylyltransferase
Helicase_C	PF00271.26	gi|568163142|ref|YP_008946463.1|	-	0.045	13.6	0.0	0.086	12.7	0.0	1.4	1	0	0	1	1	1	0	Helicase	conserved	C-terminal	domain
Citrate_ly_lig	PF08218.6	gi|568163142|ref|YP_008946463.1|	-	0.12	11.7	0.0	5.9	6.3	0.0	2.3	1	1	2	3	3	3	0	Citrate	lyase	ligase	C-terminal	domain
DUF981	PF06168.6	gi|568163143|ref|YP_008946464.1|	-	3.4e-63	212.8	19.2	4e-63	212.6	13.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF981)
DUF2427	PF10348.4	gi|568163143|ref|YP_008946464.1|	-	0.031	13.8	1.0	0.031	13.8	0.7	2.6	3	1	0	3	3	3	0	Domain	of	unknown	function	(DUF2427)
VPEP	PF07589.6	gi|568163143|ref|YP_008946464.1|	-	1.2	9.1	0.1	1.2	9.1	0.1	3.8	5	0	0	5	5	5	0	PEP-CTERM	motif
Tetraspannin	PF00335.15	gi|568163143|ref|YP_008946464.1|	-	2	7.6	19.6	0.33	10.1	1.3	2.4	1	1	1	2	2	2	0	Tetraspanin	family
HAD_2	PF13419.1	gi|568163144|ref|YP_008946465.1|	-	3.3e-19	69.7	0.0	5.1e-19	69.1	0.0	1.3	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|568163144|ref|YP_008946465.1|	-	2.5e-05	23.9	0.0	4e-05	23.2	0.0	1.2	1	0	0	1	1	1	1	HAD-hyrolase-like
MIase	PF02426.11	gi|568163145|ref|YP_008946466.1|	-	3.8e-12	45.8	0.0	7.3e-12	44.9	0.0	1.5	1	1	1	2	2	2	1	Muconolactone	delta-isomerase
GYD	PF08734.6	gi|568163145|ref|YP_008946466.1|	-	0.017	14.8	0.0	0.018	14.7	0.0	1.2	1	0	0	1	1	1	0	GYD	domain
AsnC_trans_reg	PF01037.16	gi|568163145|ref|YP_008946466.1|	-	0.13	12.0	0.0	0.19	11.4	0.0	1.4	1	0	0	1	1	1	0	AsnC	family
SBP56	PF05694.6	gi|568163147|ref|YP_008946468.1|	-	1.4e-207	689.7	0.0	1.6e-207	689.5	0.0	1.0	1	0	0	1	1	1	1	56kDa	selenium	binding	protein	(SBP56)
Rad54_N	PF08658.5	gi|568163147|ref|YP_008946468.1|	-	0.18	11.5	0.0	0.3	10.8	0.0	1.2	1	0	0	1	1	1	0	Rad54	N	terminal
DUF1679	PF07914.6	gi|568163147|ref|YP_008946468.1|	-	0.25	9.9	0.0	0.42	9.1	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1679)
AMP-binding	PF00501.23	gi|568163148|ref|YP_008946469.1|	-	3.9e-89	298.9	0.0	4.8e-89	298.6	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|568163148|ref|YP_008946469.1|	-	7.9e-23	81.1	0.9	4.4e-22	78.8	0.2	2.4	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
BPL_LplA_LipB	PF03099.14	gi|568163149|ref|YP_008946470.1|	-	3.5e-16	59.3	0.7	5.3e-16	58.7	0.5	1.3	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
Biotin_lipoyl	PF00364.17	gi|568163150|ref|YP_008946471.1|	-	5.1e-12	45.2	1.5	8.1e-12	44.6	1.0	1.3	1	0	0	1	1	1	1	Biotin-requiring	enzyme
Biotin_lipoyl_2	PF13533.1	gi|568163150|ref|YP_008946471.1|	-	1.4e-07	31.0	6.1	0.00012	21.7	0.9	2.2	1	1	1	2	2	2	2	Biotin-lipoyl	like
HlyD_2	PF12700.2	gi|568163150|ref|YP_008946471.1|	-	0.00016	20.9	3.2	0.028	13.5	0.2	2.0	1	1	1	2	2	2	2	HlyD	family	secretion	protein
GCV_H	PF01597.14	gi|568163150|ref|YP_008946471.1|	-	0.0022	17.6	0.2	0.0027	17.3	0.1	1.2	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
RnfC_N	PF13375.1	gi|568163150|ref|YP_008946471.1|	-	0.011	15.4	0.3	0.023	14.4	0.2	1.5	1	1	1	2	2	2	0	RnfC	Barrel	sandwich	hybrid	domain
HlyD_3	PF13437.1	gi|568163150|ref|YP_008946471.1|	-	0.012	15.9	0.6	3.3	8.1	0.0	2.2	2	0	0	2	2	2	0	HlyD	family	secretion	protein
HlyD	PF00529.15	gi|568163150|ref|YP_008946471.1|	-	0.018	14.3	0.8	0.018	14.3	0.5	1.8	2	0	0	2	2	2	0	HlyD	family	secretion	protein
PTS_EIIA_1	PF00358.15	gi|568163150|ref|YP_008946471.1|	-	0.031	13.8	0.4	1.6	8.3	0.0	2.0	1	1	1	2	2	2	0	phosphoenolpyruvate-dependent	sugar	phosphotransferase	system,	EIIA	1
Radical_SAM	PF04055.16	gi|568163151|ref|YP_008946472.1|	-	1.8e-16	60.7	0.2	4.2e-16	59.5	0.1	1.6	2	0	0	2	2	2	1	Radical	SAM	superfamily
adh_short_C2	PF13561.1	gi|568163151|ref|YP_008946472.1|	-	0.0085	15.8	0.2	0.044	13.5	0.1	1.9	1	1	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
B12-binding	PF02310.14	gi|568163151|ref|YP_008946472.1|	-	0.033	14.0	0.5	0.89	9.4	0.3	2.7	1	1	0	1	1	1	0	B12	binding	domain
DUF3198	PF11433.3	gi|568163151|ref|YP_008946472.1|	-	0.037	13.8	0.2	0.085	12.7	0.1	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3198)
RYDR_ITPR	PF01365.16	gi|568163151|ref|YP_008946472.1|	-	0.064	12.4	0.0	0.12	11.5	0.0	1.4	1	0	0	1	1	1	0	RIH	domain
BPL_LplA_LipB	PF03099.14	gi|568163152|ref|YP_008946473.1|	-	2.9e-17	62.8	0.0	4e-17	62.4	0.0	1.2	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
HpcH_HpaI	PF03328.9	gi|568163154|ref|YP_008946475.1|	-	1e-31	109.5	0.1	5.5e-30	103.8	0.0	2.1	1	1	0	1	1	1	1	HpcH/HpaI	aldolase/citrate	lyase	family
C-C_Bond_Lyase	PF15617.1	gi|568163154|ref|YP_008946475.1|	-	6.8e-18	64.5	0.1	1.6e-09	37.0	0.0	2.1	2	0	0	2	2	2	2	C-C_Bond_Lyase	of	the	TIM-Barrel	fold
BH4	PF02180.12	gi|568163154|ref|YP_008946475.1|	-	0.058	12.9	0.1	0.13	11.7	0.0	1.5	1	0	0	1	1	1	0	Bcl-2	homology	region	4
PhoU	PF01895.14	gi|568163154|ref|YP_008946475.1|	-	0.3	11.5	3.9	4.1	7.9	0.4	2.6	2	0	0	2	2	2	0	PhoU	domain
4HBT	PF03061.17	gi|568163155|ref|YP_008946476.1|	-	7.5e-15	54.8	0.0	9.3e-15	54.5	0.0	1.1	1	0	0	1	1	1	1	Thioesterase	superfamily
4HBT_3	PF13622.1	gi|568163155|ref|YP_008946476.1|	-	2.8e-05	24.0	0.0	3.5e-05	23.6	0.0	1.1	1	0	0	1	1	1	1	Thioesterase-like	superfamily
DUF4442	PF14539.1	gi|568163155|ref|YP_008946476.1|	-	0.027	14.4	0.0	0.033	14.1	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4442)
YLP	PF02757.12	gi|568163156|ref|YP_008946477.1|	-	0.47	10.2	0.3	0.47	10.2	0.2	3.0	3	0	0	3	3	3	0	YLP	motif
ETF	PF01012.16	gi|568163157|ref|YP_008946478.1|	-	4.1e-79	264.0	0.2	1.8e-38	131.8	0.2	2.1	2	0	0	2	2	2	2	Electron	transfer	flavoprotein	domain
ETF_alpha	PF00766.14	gi|568163157|ref|YP_008946478.1|	-	6.5e-33	112.2	0.2	1.6e-32	110.9	0.1	1.7	1	0	0	1	1	1	1	Electron	transfer	flavoprotein	FAD-binding	domain
GatB_Yqey	PF02637.13	gi|568163157|ref|YP_008946478.1|	-	0.031	13.9	0.1	0.59	9.8	0.1	2.2	1	1	0	1	1	1	0	GatB	domain
Oxidored_nitro	PF00148.14	gi|568163157|ref|YP_008946478.1|	-	0.067	11.8	0.6	7.1	5.1	0.0	2.5	2	1	0	2	2	2	0	Nitrogenase	component	1	type	Oxidoreductase
DAO	PF01266.19	gi|568163158|ref|YP_008946479.1|	-	1.4e-18	66.9	0.6	2.5e-09	36.5	0.0	2.2	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
HI0933_like	PF03486.9	gi|568163158|ref|YP_008946479.1|	-	1.1e-10	40.5	6.0	1.6e-08	33.4	0.9	2.2	2	0	0	2	2	2	2	HI0933-like	protein
FAD_oxidored	PF12831.2	gi|568163158|ref|YP_008946479.1|	-	1.4e-09	37.5	2.1	2.4e-09	36.8	1.4	1.4	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|568163158|ref|YP_008946479.1|	-	7.6e-09	34.9	1.7	1.5e-08	33.9	1.2	1.4	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox_2	PF07992.9	gi|568163158|ref|YP_008946479.1|	-	1.3e-08	35.0	2.2	2.2e-08	34.2	1.5	1.6	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|568163158|ref|YP_008946479.1|	-	1.8e-07	30.3	3.2	5.4e-07	28.8	2.2	1.7	1	1	0	1	1	1	1	Glucose	inhibited	division	protein	A
Pyr_redox_3	PF13738.1	gi|568163158|ref|YP_008946479.1|	-	1.5e-06	28.4	0.0	2.9e-06	27.4	0.0	1.5	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|568163158|ref|YP_008946479.1|	-	2.1e-06	27.6	0.1	4e-06	26.7	0.1	1.5	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.12	gi|568163158|ref|YP_008946479.1|	-	1.4e-05	24.2	0.2	2.8e-05	23.3	0.2	1.5	1	0	0	1	1	1	1	Thi4	family
FAD_binding_3	PF01494.14	gi|568163158|ref|YP_008946479.1|	-	1.5e-05	24.2	0.2	0.0013	17.8	0.2	2.4	3	0	0	3	3	3	1	FAD	binding	domain
Lycopene_cycl	PF05834.7	gi|568163158|ref|YP_008946479.1|	-	4.3e-05	22.6	1.4	0.0002	20.3	1.0	1.9	1	1	0	1	1	1	1	Lycopene	cyclase	protein
Pyr_redox	PF00070.22	gi|568163158|ref|YP_008946479.1|	-	0.0002	21.6	0.6	0.056	13.8	0.0	2.6	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
AlaDh_PNT_C	PF01262.16	gi|568163158|ref|YP_008946479.1|	-	0.057	12.9	0.1	0.11	12.0	0.0	1.5	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
NAD_binding_7	PF13241.1	gi|568163158|ref|YP_008946479.1|	-	0.075	13.2	0.0	0.17	12.1	0.0	1.6	1	0	0	1	1	1	0	Putative	NAD(P)-binding
NAD_binding_9	PF13454.1	gi|568163158|ref|YP_008946479.1|	-	0.076	12.7	1.9	1.9	8.2	0.1	2.2	2	0	0	2	2	2	0	FAD-NAD(P)-binding
3HCDH_N	PF02737.13	gi|568163158|ref|YP_008946479.1|	-	0.11	12.1	0.8	0.22	11.1	0.5	1.6	1	1	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Fer4_7	PF12838.2	gi|568163159|ref|YP_008946480.1|	-	1.7e-08	34.6	34.6	1.7e-05	25.1	9.2	2.2	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|568163159|ref|YP_008946480.1|	-	8.8e-07	28.2	18.2	2.2e-06	26.9	2.9	3.2	3	0	0	3	3	3	1	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|568163159|ref|YP_008946480.1|	-	2e-06	27.4	10.5	3.1e-06	26.8	7.3	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|568163159|ref|YP_008946480.1|	-	1.4e-05	24.7	18.4	0.00073	19.3	2.7	2.8	2	1	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|568163159|ref|YP_008946480.1|	-	1.8e-05	24.3	14.6	7.7e-05	22.3	2.0	2.5	2	1	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|568163159|ref|YP_008946480.1|	-	2.3e-05	24.5	11.9	0.00017	21.7	8.7	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|568163159|ref|YP_008946480.1|	-	0.00012	21.9	6.6	0.00057	19.8	0.3	2.3	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_11	PF13247.1	gi|568163159|ref|YP_008946480.1|	-	0.00019	21.2	5.0	0.00027	20.7	3.5	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|568163159|ref|YP_008946480.1|	-	0.0005	19.8	11.1	0.0011	18.7	7.7	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
ETF_QO	PF05187.8	gi|568163159|ref|YP_008946480.1|	-	0.00079	19.3	0.3	0.0011	18.9	0.2	1.2	1	0	0	1	1	1	1	Electron	transfer	flavoprotein-ubiquinone	oxidoreductase
Fer4_4	PF12800.2	gi|568163159|ref|YP_008946480.1|	-	0.00079	19.5	14.6	0.0008	19.5	2.4	2.4	2	1	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|568163159|ref|YP_008946480.1|	-	0.00092	19.5	8.7	0.0069	16.7	1.3	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|568163159|ref|YP_008946480.1|	-	0.014	15.9	4.5	0.014	15.9	3.1	2.8	2	1	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|568163159|ref|YP_008946480.1|	-	0.093	13.4	2.8	0.093	13.4	2.0	2.7	1	1	2	3	3	3	0	4Fe-4S	double	cluster	binding	domain
Fer4_18	PF13746.1	gi|568163159|ref|YP_008946480.1|	-	0.17	12.2	13.5	0.3	11.5	3.3	2.7	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
A2L_zn_ribbon	PF08792.5	gi|568163159|ref|YP_008946480.1|	-	0.84	9.1	5.1	0.6	9.6	0.5	2.4	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
DUF723	PF05265.8	gi|568163159|ref|YP_008946480.1|	-	4.2	7.2	7.9	0.42	10.4	2.2	1.9	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF723)
FdhD-NarQ	PF02634.10	gi|568163160|ref|YP_008946481.1|	-	3.3e-75	252.5	0.0	3.7e-75	252.4	0.0	1.0	1	0	0	1	1	1	1	FdhD/NarQ	family
DUF1641	PF07849.6	gi|568163161|ref|YP_008946482.1|	-	3.2e-13	49.0	0.2	5e-13	48.4	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1641)
Radical_SAM	PF04055.16	gi|568163161|ref|YP_008946482.1|	-	0.03	14.4	0.0	0.063	13.4	0.0	1.5	2	0	0	2	2	2	0	Radical	SAM	superfamily
Molybdopterin	PF00384.17	gi|568163162|ref|YP_008946483.1|	-	1.6e-86	290.7	0.0	2e-86	290.4	0.0	1.1	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase
Molydop_binding	PF01568.16	gi|568163162|ref|YP_008946483.1|	-	1e-20	73.5	0.0	1.9e-20	72.6	0.0	1.5	1	0	0	1	1	1	1	Molydopterin	dinucleotide	binding	domain
Molybdop_Fe4S4	PF04879.11	gi|568163162|ref|YP_008946483.1|	-	1.3e-18	66.4	0.5	1.3e-18	66.4	0.4	2.3	2	0	0	2	2	1	1	Molybdopterin	oxidoreductase	Fe4S4	domain
Fer2_4	PF13510.1	gi|568163162|ref|YP_008946483.1|	-	1.7e-13	50.1	0.2	4.8e-13	48.7	0.1	1.8	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
NADH-G_4Fe-4S_3	PF10588.4	gi|568163162|ref|YP_008946483.1|	-	1.3e-12	46.7	0.9	1.3e-12	46.7	0.6	2.1	2	0	0	2	2	1	1	NADH-ubiquinone	oxidoreductase-G	iron-sulfur	binding	region
Fer4	PF00037.22	gi|568163162|ref|YP_008946483.1|	-	3.7e-11	42.1	17.7	3.7e-06	26.3	2.4	3.5	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|568163162|ref|YP_008946483.1|	-	3.8e-08	33.0	6.0	3.8e-08	33.0	4.2	2.5	3	0	0	3	3	2	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|568163162|ref|YP_008946483.1|	-	8.3e-08	31.7	17.8	0.00027	20.6	1.2	3.1	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|568163162|ref|YP_008946483.1|	-	3.4e-07	30.5	10.5	3.4e-07	30.5	7.3	3.6	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|568163162|ref|YP_008946483.1|	-	1.2e-06	28.6	9.4	1.2e-06	28.6	6.5	3.3	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|568163162|ref|YP_008946483.1|	-	4.1e-06	26.5	11.3	4.1e-06	26.5	7.9	3.1	3	1	2	5	5	3	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|568163162|ref|YP_008946483.1|	-	1.1e-05	25.3	10.2	1.1e-05	25.3	7.1	2.9	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|568163162|ref|YP_008946483.1|	-	4.2e-05	23.2	10.9	0.0011	18.7	0.9	3.3	4	0	0	4	4	2	2	4Fe-4S	binding	domain
TPP_enzyme_M	PF00205.17	gi|568163162|ref|YP_008946483.1|	-	5.3e-05	22.9	0.2	1.8	8.2	0.0	3.5	3	0	0	3	3	3	2	Thiamine	pyrophosphate	enzyme,	central	domain
Fer2	PF00111.22	gi|568163162|ref|YP_008946483.1|	-	0.00013	21.6	0.3	0.00013	21.6	0.2	2.6	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_18	PF13746.1	gi|568163162|ref|YP_008946483.1|	-	0.00024	21.4	14.8	0.0015	18.8	0.5	3.1	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|568163162|ref|YP_008946483.1|	-	0.00052	20.7	16.4	0.0034	18.0	2.3	4.0	4	1	0	4	4	3	2	4Fe-4S	double	cluster	binding	domain
Fer4_17	PF13534.1	gi|568163162|ref|YP_008946483.1|	-	0.00065	19.9	14.4	0.092	13.1	2.2	3.1	2	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|568163162|ref|YP_008946483.1|	-	0.0013	19.2	5.8	0.15	12.6	1.0	3.1	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.1	gi|568163162|ref|YP_008946483.1|	-	0.0085	16.4	6.8	1.1	9.6	0.1	2.8	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_3	PF12798.2	gi|568163162|ref|YP_008946483.1|	-	0.016	15.7	26.0	0.057	14.0	5.4	3.2	3	0	0	3	3	2	0	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|568163162|ref|YP_008946483.1|	-	9.7	6.8	27.3	0.031	14.6	1.8	3.4	4	0	0	4	4	2	0	4Fe-4S	binding	domain
2_5_RNA_ligase2	PF13563.1	gi|568164759|ref|YP_008946486.1|	-	5e-13	49.0	0.0	7e-13	48.5	0.0	1.2	1	0	0	1	1	1	1	2'-5'	RNA	ligase	superfamily
LigT_PEase	PF02834.11	gi|568164759|ref|YP_008946486.1|	-	0.097	12.6	0.3	0.33	10.9	0.1	2.0	2	0	0	2	2	2	0	LigT	like	Phosphoesterase
DUF2067	PF09840.4	gi|568163164|ref|YP_008946487.1|	-	0.011	15.1	0.4	0.015	14.7	0.2	1.3	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2067)
RHH_1	PF01402.16	gi|568163164|ref|YP_008946487.1|	-	0.014	15.2	0.2	0.03	14.2	0.0	1.6	1	1	0	1	1	1	0	Ribbon-helix-helix	protein,	copG	family
CBS	PF00571.23	gi|568163164|ref|YP_008946487.1|	-	0.15	11.8	0.6	0.42	10.4	0.1	1.8	2	1	0	2	2	2	0	CBS	domain
PIN	PF01850.16	gi|568163165|ref|YP_008946488.1|	-	5.1e-16	59.0	2.0	5.8e-16	58.9	1.4	1.0	1	0	0	1	1	1	1	PIN	domain
TauE	PF01925.14	gi|568163166|ref|YP_008946489.1|	-	7.5e-48	163.0	37.8	8.7e-48	162.8	26.2	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
Rick_17kDa_Anti	PF05433.10	gi|568163166|ref|YP_008946489.1|	-	0.72	9.5	11.1	0.34	10.6	0.2	3.0	3	0	0	3	3	3	0	Glycine	zipper	2TM	domain
CCG	PF02754.11	gi|568163167|ref|YP_008946490.1|	-	6.8e-29	99.7	0.2	1.2e-15	57.2	0.0	2.5	3	0	0	3	3	3	2	Cysteine-rich	domain
SMRP1	PF15181.1	gi|568163167|ref|YP_008946490.1|	-	0.072	12.4	0.0	0.11	11.8	0.0	1.2	1	0	0	1	1	1	0	Spermatid-specific	manchette-related	protein	1
Fer4_8	PF13183.1	gi|568163168|ref|YP_008946491.1|	-	1.7e-10	40.7	6.7	2.6e-10	40.1	4.7	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|568163168|ref|YP_008946491.1|	-	1.4e-09	38.1	4.0	2.5e-09	37.3	2.8	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|568163168|ref|YP_008946491.1|	-	2.3e-08	34.1	6.1	4.7e-08	33.1	4.2	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|568163168|ref|YP_008946491.1|	-	1.2e-05	25.6	3.9	0.0019	18.6	0.3	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|568163168|ref|YP_008946491.1|	-	1.2e-05	25.5	6.5	2.3e-05	24.6	4.5	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|568163168|ref|YP_008946491.1|	-	0.00026	21.6	3.4	0.015	16.0	0.3	2.5	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Fer4_10	PF13237.1	gi|568163168|ref|YP_008946491.1|	-	0.00074	19.2	11.9	0.0079	15.9	8.9	2.0	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|568163168|ref|YP_008946491.1|	-	0.0024	17.7	9.7	0.28	11.1	1.5	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|568163168|ref|YP_008946491.1|	-	0.023	15.0	12.6	0.53	10.7	1.5	2.2	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|568163168|ref|YP_008946491.1|	-	0.024	14.4	9.6	0.11	12.3	6.7	1.9	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|568163168|ref|YP_008946491.1|	-	0.1	13.2	2.2	0.4	11.2	0.1	2.4	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_20	PF14691.1	gi|568163168|ref|YP_008946491.1|	-	0.23	11.0	8.0	0.1	12.2	0.6	2.2	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4	PF00037.22	gi|568163168|ref|YP_008946491.1|	-	0.28	10.8	13.6	0.42	10.2	2.0	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
IZUMO	PF15005.1	gi|568163168|ref|YP_008946491.1|	-	0.5	10.4	4.8	0.96	9.4	0.5	2.3	2	0	0	2	2	2	0	Izumo	sperm-egg	fusion
GrpE	PF01025.14	gi|568163169|ref|YP_008946492.1|	-	0.071	12.6	0.5	0.12	11.9	0.3	1.3	1	0	0	1	1	1	0	GrpE
Imm5	PF14423.1	gi|568163169|ref|YP_008946492.1|	-	0.19	11.3	1.6	0.22	11.1	0.2	1.6	2	0	0	2	2	2	0	Immunity	protein	Imm5
Pyr_redox_2	PF07992.9	gi|568163170|ref|YP_008946493.1|	-	7.7e-14	52.0	0.0	1.5e-13	51.0	0.0	1.6	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|568163170|ref|YP_008946493.1|	-	2e-09	36.9	0.4	4.3e-09	35.8	0.3	1.5	1	1	1	2	2	2	1	FAD	binding	domain
GIDA	PF01134.17	gi|568163170|ref|YP_008946493.1|	-	3e-09	36.2	0.0	5.2e-05	22.2	0.0	2.2	2	0	0	2	2	2	2	Glucose	inhibited	division	protein	A
FAD_binding_2	PF00890.19	gi|568163170|ref|YP_008946493.1|	-	2.7e-08	33.0	0.0	4.6e-07	29.0	0.0	2.0	2	0	0	2	2	2	1	FAD	binding	domain
HI0933_like	PF03486.9	gi|568163170|ref|YP_008946493.1|	-	2.7e-08	32.6	0.5	7.9e-05	21.3	0.1	2.1	1	1	1	2	2	2	2	HI0933-like	protein
FAD_oxidored	PF12831.2	gi|568163170|ref|YP_008946493.1|	-	2.8e-08	33.2	0.1	5e-08	32.4	0.1	1.4	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Pyr_redox_3	PF13738.1	gi|568163170|ref|YP_008946493.1|	-	8.8e-08	32.4	0.2	0.00021	21.4	0.0	2.2	1	1	1	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|568163170|ref|YP_008946493.1|	-	8.8e-08	32.0	0.1	2.3e-07	30.7	0.0	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.12	gi|568163170|ref|YP_008946493.1|	-	3.1e-07	29.7	0.0	4.9e-07	29.0	0.0	1.3	1	0	0	1	1	1	1	Thi4	family
DAO	PF01266.19	gi|568163170|ref|YP_008946493.1|	-	1.2e-06	27.6	0.4	5.6e-06	25.5	0.1	2.1	3	0	0	3	3	3	1	FAD	dependent	oxidoreductase
Pyr_redox	PF00070.22	gi|568163170|ref|YP_008946493.1|	-	1.5e-06	28.4	0.6	9e-05	22.8	0.0	2.4	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Amino_oxidase	PF01593.19	gi|568163170|ref|YP_008946493.1|	-	9.9e-06	24.8	0.1	0.00057	19.0	0.0	2.2	2	0	0	2	2	2	1	Flavin	containing	amine	oxidoreductase
Lycopene_cycl	PF05834.7	gi|568163170|ref|YP_008946493.1|	-	0.00029	19.8	0.0	0.00039	19.4	0.0	1.2	1	0	0	1	1	1	1	Lycopene	cyclase	protein
NAD_binding_9	PF13454.1	gi|568163170|ref|YP_008946493.1|	-	0.0012	18.6	0.0	0.079	12.7	0.0	2.8	3	0	0	3	3	3	1	FAD-NAD(P)-binding
NAD_binding_7	PF13241.1	gi|568163170|ref|YP_008946493.1|	-	0.0083	16.3	0.1	0.02	15.1	0.1	1.7	1	1	0	1	1	1	1	Putative	NAD(P)-binding
ThiF	PF00899.16	gi|568163170|ref|YP_008946493.1|	-	0.014	15.1	0.4	0.033	14.0	0.1	1.7	2	0	0	2	2	2	0	ThiF	family
Shikimate_DH	PF01488.15	gi|568163170|ref|YP_008946493.1|	-	0.016	15.3	0.1	0.033	14.2	0.0	1.5	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
CPSase_L_chain	PF00289.17	gi|568163170|ref|YP_008946493.1|	-	0.017	15.2	0.0	0.034	14.2	0.0	1.5	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
AlaDh_PNT_C	PF01262.16	gi|568163170|ref|YP_008946493.1|	-	0.032	13.8	0.1	0.19	11.2	0.0	2.1	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
Trp_halogenase	PF04820.9	gi|568163170|ref|YP_008946493.1|	-	0.053	12.1	0.1	0.087	11.4	0.1	1.3	1	0	0	1	1	1	0	Tryptophan	halogenase
IlvN	PF07991.7	gi|568163170|ref|YP_008946493.1|	-	0.067	12.5	0.1	0.17	11.2	0.0	1.8	1	1	0	1	1	1	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
K_oxygenase	PF13434.1	gi|568163170|ref|YP_008946493.1|	-	0.068	12.0	0.1	0.72	8.7	0.0	2.1	2	0	0	2	2	2	0	L-lysine	6-monooxygenase	(NADPH-requiring)
2-Hacid_dh_C	PF02826.14	gi|568163170|ref|YP_008946493.1|	-	0.088	11.9	0.0	0.14	11.3	0.0	1.3	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
TrkA_N	PF02254.13	gi|568163170|ref|YP_008946493.1|	-	0.11	12.4	0.0	0.27	11.2	0.0	1.6	1	0	0	1	1	1	0	TrkA-N	domain
CCG	PF02754.11	gi|568163171|ref|YP_008946494.1|	-	5.8e-09	35.8	0.0	1.8e-07	31.0	0.0	2.8	2	2	0	2	2	2	1	Cysteine-rich	domain
TusA	PF01206.12	gi|568163172|ref|YP_008946495.1|	-	6.4e-12	44.9	0.0	7e-12	44.7	0.0	1.0	1	0	0	1	1	1	1	Sulfurtransferase	TusA
MoeZ_MoeB	PF05237.8	gi|568163172|ref|YP_008946495.1|	-	0.0041	16.6	0.0	0.0046	16.5	0.0	1.2	1	0	0	1	1	1	1	MoeZ/MoeB	domain
Pyr_redox_2	PF07992.9	gi|568163173|ref|YP_008946496.1|	-	2.6e-09	37.2	0.0	5.4e-09	36.2	0.0	1.6	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
DrsE	PF02635.10	gi|568163174|ref|YP_008946497.1|	-	1.3e-08	34.9	0.0	1.6e-08	34.6	0.0	1.1	1	0	0	1	1	1	1	DsrE/DsrF-like	family
DrsE_2	PF13686.1	gi|568163174|ref|YP_008946497.1|	-	4.4e-06	26.5	0.4	1.4e-05	24.9	0.3	1.7	1	1	0	1	1	1	1	DsrE/DsrF/DrsH-like	family
Methyltrn_RNA_2	PF04013.7	gi|568163174|ref|YP_008946497.1|	-	0.0016	18.0	0.0	0.0018	17.8	0.0	1.0	1	0	0	1	1	1	1	Putative	SAM-dependent	RNA	methyltransferase
DUF1641	PF07849.6	gi|568163175|ref|YP_008946498.1|	-	7.3e-16	57.5	0.1	6.7e-15	54.4	0.0	2.7	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF1641)
UbiD	PF01977.11	gi|568163175|ref|YP_008946498.1|	-	0.0056	15.1	0.2	0.071	11.5	0.0	2.2	1	1	1	2	2	2	1	3-octaprenyl-4-hydroxybenzoate	carboxy-lyase
Sec5	PF15469.1	gi|568163175|ref|YP_008946498.1|	-	0.13	11.9	5.1	0.16	11.6	0.3	2.8	1	1	1	2	2	2	0	Exocyst	complex	component	Sec5
Syntaxin_2	PF14523.1	gi|568163175|ref|YP_008946498.1|	-	0.24	11.4	2.0	0.87	9.6	0.1	2.6	3	0	0	3	3	3	0	Syntaxin-like	protein
DUF2666	PF10869.3	gi|568163175|ref|YP_008946498.1|	-	0.25	11.3	4.5	11	6.0	0.2	3.2	2	1	1	4	4	4	0	Protein	of	unknown	function	(DUF2666)
DUF3886	PF13025.1	gi|568163175|ref|YP_008946498.1|	-	0.3	11.0	10.4	1.1	9.3	0.4	3.9	5	0	0	5	5	5	0	Protein	of	unknown	function	(DUF3886)
DUF2482	PF10655.4	gi|568163175|ref|YP_008946498.1|	-	0.4	10.7	5.2	14	5.7	0.2	3.6	2	2	1	3	3	3	0	Hypothetical	protein	of	unknown	function	(DUF2482)
DUF770	PF05591.7	gi|568163175|ref|YP_008946498.1|	-	0.55	9.7	7.6	3.6	7.1	0.0	3.2	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF770)
Fer4_8	PF13183.1	gi|568163176|ref|YP_008946499.1|	-	7e-10	38.7	6.7	1.3e-09	37.9	4.6	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|568163176|ref|YP_008946499.1|	-	1.2e-08	35.1	6.9	1.2e-08	35.1	4.8	1.7	2	0	0	2	2	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|568163176|ref|YP_008946499.1|	-	9.2e-06	26.0	4.5	0.053	13.9	0.0	2.6	3	0	0	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|568163176|ref|YP_008946499.1|	-	1e-05	25.6	8.4	2.2e-05	24.6	5.8	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|568163176|ref|YP_008946499.1|	-	2.8e-05	23.7	8.0	0.0078	16.0	0.9	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|568163176|ref|YP_008946499.1|	-	0.00012	21.7	10.0	0.00035	20.3	7.0	1.7	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|568163176|ref|YP_008946499.1|	-	0.00079	19.7	9.9	0.01	16.2	7.8	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|568163176|ref|YP_008946499.1|	-	0.0014	18.7	11.1	0.0024	18.0	0.8	2.2	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|568163176|ref|YP_008946499.1|	-	0.013	15.3	8.2	0.087	12.7	5.8	2.0	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_20	PF14691.1	gi|568163176|ref|YP_008946499.1|	-	0.016	14.8	6.0	0.038	13.6	0.2	2.3	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_16	PF13484.1	gi|568163176|ref|YP_008946499.1|	-	0.055	14.2	11.5	0.29	11.8	8.0	2.2	1	1	0	1	1	1	0	4Fe-4S	double	cluster	binding	domain
SHOCT	PF09851.4	gi|568163176|ref|YP_008946499.1|	-	0.076	12.5	3.4	0.2	11.1	2.3	1.7	1	0	0	1	1	1	0	Short	C-terminal	domain
Fer4	PF00037.22	gi|568163176|ref|YP_008946499.1|	-	0.28	10.8	16.9	0.12	11.9	1.9	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|568163176|ref|YP_008946499.1|	-	0.55	10.2	13.0	2.6	8.0	1.4	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_13	PF13370.1	gi|568163176|ref|YP_008946499.1|	-	1.7	9.1	7.3	2.9	8.3	0.2	2.7	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
TusA	PF01206.12	gi|568163177|ref|YP_008946500.1|	-	2.1e-25	88.1	0.0	2.4e-25	87.9	0.0	1.0	1	0	0	1	1	1	1	Sulfurtransferase	TusA
DUF2249	PF10006.4	gi|568163177|ref|YP_008946500.1|	-	0.0058	16.1	0.1	0.019	14.5	0.0	1.7	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2249)
SH3_3	PF08239.6	gi|568163177|ref|YP_008946500.1|	-	0.12	12.5	0.0	0.18	12.0	0.0	1.2	1	0	0	1	1	1	0	Bacterial	SH3	domain
DrsE_2	PF13686.1	gi|568163178|ref|YP_008946501.1|	-	9e-29	100.1	0.1	1.2e-28	99.8	0.1	1.1	1	0	0	1	1	1	1	DsrE/DsrF/DrsH-like	family
DrsE	PF02635.10	gi|568163178|ref|YP_008946501.1|	-	3.8e-08	33.4	0.0	1.3e-07	31.6	0.0	1.7	1	1	0	1	1	1	1	DsrE/DsrF-like	family
DUF4254	PF14063.1	gi|568163178|ref|YP_008946501.1|	-	0.076	12.6	0.0	0.097	12.2	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4254)
DrsE	PF02635.10	gi|568163179|ref|YP_008946502.1|	-	4.2e-16	59.1	0.0	4.8e-16	58.9	0.0	1.0	1	0	0	1	1	1	1	DsrE/DsrF-like	family
DrsE_2	PF13686.1	gi|568163179|ref|YP_008946502.1|	-	1.3e-14	54.1	0.4	1.3e-06	28.2	0.1	2.0	1	1	1	2	2	2	2	DsrE/DsrF/DrsH-like	family
Pyr_redox_2	PF07992.9	gi|568163180|ref|YP_008946503.1|	-	4.8e-24	85.3	7.0	3.5e-16	59.6	0.1	3.7	2	1	1	3	3	3	3	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|568163180|ref|YP_008946503.1|	-	1.3e-19	70.3	3.9	1.8e-15	57.0	0.1	2.6	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|568163180|ref|YP_008946503.1|	-	3.2e-17	62.5	0.0	3.8e-16	59.0	0.0	2.5	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
DAO	PF01266.19	gi|568163180|ref|YP_008946503.1|	-	3e-13	49.4	5.8	0.0004	19.4	0.0	3.3	2	1	1	3	3	3	3	FAD	dependent	oxidoreductase
Pyr_redox_3	PF13738.1	gi|568163180|ref|YP_008946503.1|	-	1.7e-12	47.8	0.0	7.7e-12	45.6	0.0	1.9	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|568163180|ref|YP_008946503.1|	-	3e-10	39.5	3.8	7.5e-05	21.7	0.1	3.6	3	1	0	4	4	4	2	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.9	gi|568163180|ref|YP_008946503.1|	-	5.7e-09	34.9	3.0	0.0025	16.3	0.3	4.1	3	1	1	4	4	4	2	HI0933-like	protein
Thi4	PF01946.12	gi|568163180|ref|YP_008946503.1|	-	1.6e-08	33.9	1.1	6.6e-05	22.1	0.0	2.9	3	0	0	3	3	3	2	Thi4	family
FAD_binding_3	PF01494.14	gi|568163180|ref|YP_008946503.1|	-	9e-08	31.5	0.2	0.00011	21.4	0.1	2.2	2	0	0	2	2	2	2	FAD	binding	domain
Trp_halogenase	PF04820.9	gi|568163180|ref|YP_008946503.1|	-	9.8e-08	31.0	0.0	4.9e-05	22.1	0.0	2.2	2	0	0	2	2	2	2	Tryptophan	halogenase
FAD_oxidored	PF12831.2	gi|568163180|ref|YP_008946503.1|	-	1.6e-07	30.7	0.4	9.6e-06	24.9	0.1	2.4	3	0	0	3	3	3	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|568163180|ref|YP_008946503.1|	-	3.7e-07	30.0	1.4	0.0013	18.7	0.3	2.5	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.19	gi|568163180|ref|YP_008946503.1|	-	3.9e-06	25.9	6.1	0.00013	21.0	1.1	2.5	3	0	0	3	3	3	2	FAD	binding	domain
K_oxygenase	PF13434.1	gi|568163180|ref|YP_008946503.1|	-	1.1e-05	24.5	0.0	0.0034	16.3	0.0	2.6	2	1	1	3	3	3	1	L-lysine	6-monooxygenase	(NADPH-requiring)
AlaDh_PNT_C	PF01262.16	gi|568163180|ref|YP_008946503.1|	-	0.00023	20.7	0.1	0.036	13.6	0.0	2.4	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
NAD_Gly3P_dh_N	PF01210.18	gi|568163180|ref|YP_008946503.1|	-	0.0011	18.7	0.0	0.8	9.4	0.0	2.4	2	0	0	2	2	2	2	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Lycopene_cycl	PF05834.7	gi|568163180|ref|YP_008946503.1|	-	0.0024	16.8	0.1	0.58	9.0	0.0	2.2	2	0	0	2	2	2	2	Lycopene	cyclase	protein
3HCDH_N	PF02737.13	gi|568163180|ref|YP_008946503.1|	-	0.0025	17.4	0.4	1.4	8.5	0.0	2.3	2	0	0	2	2	2	2	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
GDI	PF00996.13	gi|568163180|ref|YP_008946503.1|	-	0.0028	16.0	0.2	0.0046	15.3	0.2	1.3	1	0	0	1	1	1	1	GDP	dissociation	inhibitor
NAD_binding_7	PF13241.1	gi|568163180|ref|YP_008946503.1|	-	0.0055	16.9	0.3	3	8.1	0.0	2.5	2	0	0	2	2	2	1	Putative	NAD(P)-binding
Myosin_N	PF02736.14	gi|568163180|ref|YP_008946503.1|	-	0.031	13.9	0.0	0.13	11.9	0.0	2.1	1	0	0	1	1	1	0	Myosin	N-terminal	SH3-like	domain
TrkA_N	PF02254.13	gi|568163180|ref|YP_008946503.1|	-	0.59	10.1	4.0	4.1	7.4	0.0	3.0	3	0	0	3	3	2	0	TrkA-N	domain
NAD_binding_9	PF13454.1	gi|568163180|ref|YP_008946503.1|	-	0.62	9.8	3.0	52	3.5	0.2	3.7	2	2	1	3	3	3	0	FAD-NAD(P)-binding
ApbA	PF02558.11	gi|568163180|ref|YP_008946503.1|	-	1.4	8.3	4.0	24	4.3	0.0	3.2	4	0	0	4	4	4	0	Ketopantoate	reductase	PanE/ApbA
STN	PF07660.9	gi|568163181|ref|YP_008946504.1|	-	0.11	12.0	0.0	0.32	10.5	0.0	1.8	1	0	0	1	1	1	0	Secretin	and	TonB	N	terminus	short	domain
Thioredoxin_3	PF13192.1	gi|568163182|ref|YP_008946505.1|	-	1.2e-13	50.6	0.1	2.1e-13	49.8	0.0	1.4	1	0	0	1	1	1	1	Thioredoxin	domain
Thioredoxin	PF00085.15	gi|568163182|ref|YP_008946505.1|	-	0.0015	18.1	0.0	0.0032	17.1	0.0	1.6	1	0	0	1	1	1	1	Thioredoxin
DUF836	PF05768.9	gi|568163182|ref|YP_008946505.1|	-	0.0025	18.0	0.0	0.0045	17.2	0.0	1.4	1	0	0	1	1	1	1	Glutaredoxin-like	domain	(DUF836)
Glutaredoxin	PF00462.19	gi|568163182|ref|YP_008946505.1|	-	0.012	15.6	0.4	0.027	14.4	0.3	1.6	1	0	0	1	1	1	0	Glutaredoxin
Thioredoxin_9	PF14595.1	gi|568163182|ref|YP_008946505.1|	-	0.022	14.3	0.2	0.053	13.0	0.1	1.6	1	1	1	2	2	2	0	Thioredoxin
MtN3_slv	PF03083.11	gi|568163182|ref|YP_008946505.1|	-	0.094	12.5	0.0	0.14	12.0	0.0	1.3	1	0	0	1	1	1	0	Sugar	efflux	transporter	for	intercellular	exchange
UPF0278	PF08745.6	gi|568163183|ref|YP_008946506.1|	-	0.00057	19.1	0.1	0.00086	18.6	0.1	1.3	1	1	0	1	1	1	1	UPF0278	family
Peptidase_M23	PF01551.17	gi|568163184|ref|YP_008946507.1|	-	6.6e-07	29.2	0.0	1.2e-06	28.4	0.0	1.4	1	0	0	1	1	1	1	Peptidase	family	M23
Radical_SAM	PF04055.16	gi|568163185|ref|YP_008946508.1|	-	9.1e-13	48.7	0.5	1.8e-12	47.7	0.1	1.6	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|568163185|ref|YP_008946508.1|	-	0.017	15.2	0.0	0.042	13.9	0.0	1.6	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
YukD	PF08817.5	gi|568163185|ref|YP_008946508.1|	-	0.094	13.2	0.0	0.48	11.0	0.0	2.0	2	0	0	2	2	2	0	WXG100	protein	secretion	system	(Wss),	protein	YukD
Radical_SAM	PF04055.16	gi|568163186|ref|YP_008946509.1|	-	8e-13	48.8	0.1	4.9e-12	46.3	0.0	1.9	1	1	1	2	2	2	1	Radical	SAM	superfamily
B12-binding	PF02310.14	gi|568163186|ref|YP_008946509.1|	-	0.029	14.2	0.0	0.096	12.5	0.0	1.8	1	1	0	1	1	1	0	B12	binding	domain
BPL_LplA_LipB	PF03099.14	gi|568163187|ref|YP_008946510.1|	-	8e-13	48.4	0.0	1.6e-12	47.5	0.0	1.5	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
MurB_C	PF02873.11	gi|568163187|ref|YP_008946510.1|	-	0.029	14.0	0.0	0.063	13.0	0.0	1.5	1	0	0	1	1	1	0	UDP-N-acetylenolpyruvoylglucosamine	reductase,	C-terminal	domain
YHS	PF04945.8	gi|568163188|ref|YP_008946511.1|	-	1.4e-06	28.0	0.8	6.5e-06	25.8	0.4	1.9	1	1	0	1	1	1	1	YHS	domain
POR_N	PF01855.14	gi|568163188|ref|YP_008946511.1|	-	0.077	12.4	0.0	0.079	12.4	0.0	1.0	1	0	0	1	1	1	0	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
DUF1886	PF09171.5	gi|568163189|ref|YP_008946512.1|	-	0.0053	15.8	1.4	0.0056	15.7	1.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1886)
ResB	PF05140.9	gi|568163189|ref|YP_008946512.1|	-	0.0061	15.1	0.1	0.0069	14.9	0.1	1.0	1	0	0	1	1	1	1	ResB-like	family
HAD_2	PF13419.1	gi|568163190|ref|YP_008946513.1|	-	0.00036	20.8	0.0	0.00046	20.4	0.0	1.2	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
FAD_binding_3	PF01494.14	gi|568163190|ref|YP_008946513.1|	-	0.1	11.6	0.0	0.15	11.1	0.0	1.2	1	0	0	1	1	1	0	FAD	binding	domain
GCV_H	PF01597.14	gi|568163191|ref|YP_008946514.1|	-	1.9e-28	98.5	0.4	2.2e-28	98.4	0.3	1.1	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
Biotin_lipoyl	PF00364.17	gi|568163191|ref|YP_008946514.1|	-	0.06	12.9	0.0	0.15	11.6	0.0	1.7	1	1	0	1	1	1	0	Biotin-requiring	enzyme
UB2H	PF14814.1	gi|568163191|ref|YP_008946514.1|	-	0.091	12.4	0.0	0.38	10.5	0.0	1.9	2	0	0	2	2	2	0	Bifunctional	transglycosylase	second	domain
GCV_H	PF01597.14	gi|568163192|ref|YP_008946515.1|	-	2.3e-42	143.5	1.7	2.8e-42	143.2	1.2	1.1	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
Biotin_lipoyl	PF00364.17	gi|568163192|ref|YP_008946515.1|	-	2.3e-05	23.9	2.4	6.4e-05	22.5	0.8	2.1	2	0	0	2	2	2	1	Biotin-requiring	enzyme
RnfC_N	PF13375.1	gi|568163192|ref|YP_008946515.1|	-	0.007	16.0	0.3	0.007	16.0	0.2	1.9	2	0	0	2	2	2	1	RnfC	Barrel	sandwich	hybrid	domain
BPL_LplA_LipB	PF03099.14	gi|568163193|ref|YP_008946516.1|	-	1.1e-09	38.3	0.1	1.9e-09	37.5	0.0	1.3	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
Lip_prot_lig_C	PF10437.4	gi|568163193|ref|YP_008946516.1|	-	0.0023	17.5	0.1	0.0072	15.9	0.1	1.9	1	1	0	1	1	1	1	Bacterial	lipoate	protein	ligase	C-terminus
DUF3490	PF11995.3	gi|568163194|ref|YP_008946517.1|	-	0.019	14.5	0.1	0.026	14.1	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3490)
OsmC	PF02566.14	gi|568163195|ref|YP_008946518.1|	-	1.1e-20	73.6	0.0	1.7e-20	73.0	0.0	1.2	1	0	0	1	1	1	1	OsmC-like	protein
PMC2NT	PF08066.7	gi|568163196|ref|YP_008946519.1|	-	0.087	13.1	0.3	0.39	11.0	0.0	2.0	1	1	1	2	2	2	0	PMC2NT	(NUC016)	domain
HTH_24	PF13412.1	gi|568163197|ref|YP_008946520.1|	-	9e-21	73.0	0.9	2.7e-12	45.8	0.1	2.4	2	0	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|568163197|ref|YP_008946520.1|	-	1.4e-15	56.5	0.1	5.4e-08	32.2	0.0	2.9	3	0	0	3	3	3	2	AsnC-type	helix-turn-helix	domain
HTH_Mga	PF08280.6	gi|568163197|ref|YP_008946520.1|	-	2.8e-06	27.0	0.0	0.035	13.8	0.0	2.8	3	0	0	3	3	3	2	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_11	PF08279.7	gi|568163197|ref|YP_008946520.1|	-	1.2e-05	24.8	0.2	0.00091	18.8	0.0	2.3	2	0	0	2	2	2	1	HTH	domain
HTH_20	PF12840.2	gi|568163197|ref|YP_008946520.1|	-	0.00018	21.2	0.0	0.13	12.1	0.0	2.3	2	0	0	2	2	2	2	Helix-turn-helix	domain
HTH_28	PF13518.1	gi|568163197|ref|YP_008946520.1|	-	0.00044	20.1	0.0	0.6	10.1	0.0	2.5	2	0	0	2	2	2	2	Helix-turn-helix	domain
MarR	PF01047.17	gi|568163197|ref|YP_008946520.1|	-	0.0013	18.4	0.1	1	9.1	0.0	2.4	2	0	0	2	2	2	2	MarR	family
MarR_2	PF12802.2	gi|568163197|ref|YP_008946520.1|	-	0.0017	18.0	0.1	0.14	11.8	0.0	2.2	2	0	0	2	2	2	1	MarR	family
HTH_23	PF13384.1	gi|568163197|ref|YP_008946520.1|	-	0.0037	16.8	0.0	2.7	7.7	0.0	2.4	2	0	0	2	2	2	2	Homeodomain-like	domain
HTH_5	PF01022.15	gi|568163197|ref|YP_008946520.1|	-	0.0041	16.7	0.1	0.33	10.6	0.1	2.4	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
Rrf2	PF02082.15	gi|568163197|ref|YP_008946520.1|	-	0.0053	16.8	0.0	0.064	13.3	0.0	2.2	2	0	0	2	2	2	1	Transcriptional	regulator
HTH_27	PF13463.1	gi|568163197|ref|YP_008946520.1|	-	0.0094	16.2	0.0	2.4	8.5	0.0	2.5	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_Crp_2	PF13545.1	gi|568163197|ref|YP_008946520.1|	-	0.025	14.3	0.0	7.5	6.4	0.0	2.3	2	0	0	2	2	2	0	Crp-like	helix-turn-helix	domain
Put_DNA-bind_N	PF06971.8	gi|568163197|ref|YP_008946520.1|	-	0.032	13.9	0.6	0.21	11.3	0.1	2.4	2	0	0	2	2	2	0	Putative	DNA-binding	protein	N-terminus
HTH_10	PF04967.7	gi|568163197|ref|YP_008946520.1|	-	0.061	12.9	0.1	2.5	7.7	0.0	2.2	2	0	0	2	2	2	0	HTH	DNA	binding	domain
DUF977	PF06163.6	gi|568163197|ref|YP_008946520.1|	-	0.12	12.0	0.0	0.43	10.3	0.0	1.8	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF977)
HTH_9	PF08221.6	gi|568163197|ref|YP_008946520.1|	-	0.16	11.8	0.2	4.4	7.2	0.0	2.2	2	0	0	2	2	2	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
DUF1059	PF06348.6	gi|568163198|ref|YP_008946521.1|	-	6.5e-27	93.1	0.8	7.5e-27	92.9	0.6	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1059)
DUF3420	PF11900.3	gi|568163198|ref|YP_008946521.1|	-	0.23	11.5	1.2	0.37	10.9	0.8	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3420)
DUF1059	PF06348.6	gi|568163199|ref|YP_008946522.1|	-	1.2e-53	178.7	0.9	1.7e-26	91.7	0.1	2.0	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF1059)
A_thal_3526	PF09713.5	gi|568163199|ref|YP_008946522.1|	-	0.0097	16.0	0.1	0.81	9.8	0.0	2.2	2	0	0	2	2	2	1	Plant	protein	1589	of	unknown	function	(A_thal_3526)
Ogr_Delta	PF04606.7	gi|568163199|ref|YP_008946522.1|	-	0.0099	15.5	0.1	0.13	11.9	0.0	2.2	2	0	0	2	2	2	1	Ogr/Delta-like	zinc	finger
DUF2972	PF11186.3	gi|568163199|ref|YP_008946522.1|	-	0.017	14.9	1.3	1.3	8.9	0.1	2.0	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2972)
Phyto_Pns9_10	PF05878.6	gi|568163199|ref|YP_008946522.1|	-	0.026	13.5	0.2	0.03	13.3	0.1	1.1	1	0	0	1	1	1	0	Phytoreovirus	nonstructural	protein	Pns9/Pns10
Zn-ribbon_8	PF09723.5	gi|568163199|ref|YP_008946522.1|	-	0.077	12.9	1.0	2.1	8.3	0.0	2.4	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-GRF	PF06839.7	gi|568163199|ref|YP_008946522.1|	-	0.18	11.7	2.7	0.3	11.0	0.1	2.1	2	0	0	2	2	2	0	GRF	zinc	finger
PqqA	PF08042.6	gi|568163199|ref|YP_008946522.1|	-	0.55	9.9	2.7	19	5.0	0.1	2.3	2	0	0	2	2	2	0	PqqA	family
PgaD	PF13994.1	gi|568163200|ref|YP_008946523.1|	-	3.3	7.2	7.7	0.79	9.2	2.8	1.8	1	1	1	2	2	2	0	PgaD-like	protein
DUF929	PF06053.6	gi|568163201|ref|YP_008946524.1|	-	7.6e-58	195.5	14.2	1.1e-57	195.0	9.8	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF929)
Thioredoxin_7	PF13899.1	gi|568163201|ref|YP_008946524.1|	-	0.01	15.8	0.0	0.023	14.7	0.0	1.7	1	1	1	2	2	2	0	Thioredoxin-like
Thioredoxin_2	PF13098.1	gi|568163201|ref|YP_008946524.1|	-	0.052	13.7	0.6	0.13	12.4	0.0	2.0	2	0	0	2	2	2	0	Thioredoxin-like	domain
DUF3446	PF11928.3	gi|568163201|ref|YP_008946524.1|	-	1.7	8.8	7.8	2.2	8.5	0.2	3.1	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF3446)
DUF3792	PF12670.2	gi|568163202|ref|YP_008946525.1|	-	1.2	9.0	5.8	2.1	8.2	3.2	2.1	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3792)
IncA	PF04156.9	gi|568163202|ref|YP_008946525.1|	-	3.3	7.2	4.6	5.4	6.5	3.2	1.2	1	0	0	1	1	1	0	IncA	protein
DUF677	PF05055.7	gi|568163202|ref|YP_008946525.1|	-	5.1	5.6	6.4	7.5	5.1	4.5	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF677)
Amidase	PF01425.16	gi|568163203|ref|YP_008946526.1|	-	2.7e-102	342.8	0.0	3.4e-102	342.5	0.0	1.0	1	0	0	1	1	1	1	Amidase
7kD_DNA_binding	PF02294.13	gi|568163204|ref|YP_008946528.1|	-	6.1e-42	141.1	2.8	6.9e-42	140.9	2.0	1.0	1	0	0	1	1	1	1	7kD	DNA-binding	domain
Molybdopterin	PF00384.17	gi|568163205|ref|YP_008946529.1|	-	1.5e-07	30.5	0.0	3.6e-05	22.6	0.0	2.1	2	0	0	2	2	2	2	Molybdopterin	oxidoreductase
Molydop_binding	PF01568.16	gi|568163205|ref|YP_008946529.1|	-	0.00054	19.7	0.0	0.0034	17.1	0.0	2.2	2	0	0	2	2	2	1	Molydopterin	dinucleotide	binding	domain
LuxC	PF05893.9	gi|568163205|ref|YP_008946529.1|	-	0.14	10.8	0.0	0.42	9.2	0.0	1.7	2	0	0	2	2	2	0	Acyl-CoA	reductase	(LuxC)
Na_H_Exchanger	PF00999.16	gi|568163206|ref|YP_008946530.1|	-	9e-50	169.2	56.5	1.1e-49	168.9	39.2	1.0	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
PRP38	PF03371.10	gi|568163207|ref|YP_008946531.1|	-	0.66	9.5	4.4	1.9	8.0	0.0	2.5	2	1	0	2	2	2	0	PRP38	family
CoA_trans	PF01144.18	gi|568163208|ref|YP_008946532.1|	-	1.1e-22	80.2	0.0	1.4e-22	79.9	0.0	1.1	1	0	0	1	1	1	1	Coenzyme	A	transferase
CoA_trans	PF01144.18	gi|568163209|ref|YP_008946533.1|	-	3.3e-27	95.0	0.0	3.7e-27	94.9	0.0	1.0	1	0	0	1	1	1	1	Coenzyme	A	transferase
Hydantoinase_B	PF02538.9	gi|568163210|ref|YP_008946534.1|	-	5e-155	516.7	0.1	6e-155	516.4	0.1	1.0	1	0	0	1	1	1	1	Hydantoinase	B/oxoprolinase
Hydantoinase_A	PF01968.13	gi|568163211|ref|YP_008946535.1|	-	1.4e-87	293.5	3.4	4e-86	288.7	0.1	2.2	2	0	0	2	2	2	2	Hydantoinase/oxoprolinase
Hydant_A_N	PF05378.8	gi|568163211|ref|YP_008946535.1|	-	3.7e-49	166.5	0.0	7e-49	165.6	0.0	1.5	1	0	0	1	1	1	1	Hydantoinase/oxoprolinase	N-terminal	region
MutL	PF13941.1	gi|568163211|ref|YP_008946535.1|	-	0.00017	20.0	0.4	0.28	9.4	0.0	2.2	2	0	0	2	2	2	2	MutL	protein
BcrAD_BadFG	PF01869.15	gi|568163211|ref|YP_008946535.1|	-	0.028	13.7	0.0	0.062	12.5	0.0	1.8	2	0	0	2	2	2	0	BadF/BadG/BcrA/BcrD	ATPase	family
ROK	PF00480.15	gi|568163211|ref|YP_008946535.1|	-	0.048	13.4	0.1	0.17	11.7	0.0	1.9	2	0	0	2	2	2	0	ROK	family
MTS	PF05175.9	gi|568164762|ref|YP_008946537.1|	-	2.9e-05	23.5	0.0	3.2e-05	23.3	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.1	gi|568164762|ref|YP_008946537.1|	-	0.0007	19.2	0.0	0.001	18.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_32	PF13679.1	gi|568164762|ref|YP_008946537.1|	-	0.00085	19.0	0.0	0.00093	18.8	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
AdoMet_MTase	PF07757.8	gi|568164762|ref|YP_008946537.1|	-	0.015	15.3	0.0	0.016	15.3	0.0	1.1	1	0	0	1	1	1	0	Predicted	AdoMet-dependent	methyltransferase
FmrO	PF07091.6	gi|568164762|ref|YP_008946537.1|	-	0.018	14.0	0.0	0.02	13.9	0.0	1.1	1	0	0	1	1	1	0	Ribosomal	RNA	methyltransferase	(FmrO)
Methyltransf_23	PF13489.1	gi|568164762|ref|YP_008946537.1|	-	0.035	13.8	0.0	0.035	13.8	0.0	1.1	1	0	0	1	1	1	0	Methyltransferase	domain
PCMT	PF01135.14	gi|568164762|ref|YP_008946537.1|	-	0.042	13.3	0.0	0.043	13.3	0.0	1.1	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_18	PF12847.2	gi|568164762|ref|YP_008946537.1|	-	0.052	14.1	0.0	0.081	13.5	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
AviRa	PF11599.3	gi|568164762|ref|YP_008946537.1|	-	0.1	11.6	0.0	0.11	11.4	0.0	1.0	1	0	0	1	1	1	0	RRNA	methyltransferase	AviRa
Methyltransf_31	PF13847.1	gi|568164763|ref|YP_008946538.1|	-	0.00038	20.0	0.0	0.00041	19.9	0.0	1.0	1	0	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|568164763|ref|YP_008946538.1|	-	0.00087	18.9	0.0	0.00096	18.7	0.0	1.0	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_26	PF13659.1	gi|568164763|ref|YP_008946538.1|	-	0.035	14.1	0.0	0.037	14.0	0.0	1.0	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|568164763|ref|YP_008946538.1|	-	0.035	14.5	0.0	0.035	14.5	0.0	1.1	1	0	0	1	1	1	0	Methyltransferase	domain
CheR	PF01739.13	gi|568164763|ref|YP_008946538.1|	-	0.041	13.1	0.1	0.041	13.1	0.0	1.0	1	0	0	1	1	1	0	CheR	methyltransferase,	SAM	binding	domain
Methyltransf_11	PF08241.7	gi|568164763|ref|YP_008946538.1|	-	0.056	13.9	0.0	0.056	13.9	0.0	1.0	1	0	0	1	1	1	0	Methyltransferase	domain
MTS	PF05175.9	gi|568164763|ref|YP_008946538.1|	-	0.11	11.9	0.0	0.11	11.8	0.0	1.0	1	0	0	1	1	1	0	Methyltransferase	small	domain
Imm23	PF15593.1	gi|568164764|ref|YP_008946539.1|	-	0.008	16.4	0.1	0.0086	16.3	0.1	1.2	1	0	0	1	1	1	1	Immunity	protein	23
ESPR	PF13018.1	gi|568164764|ref|YP_008946539.1|	-	0.046	13.3	0.0	0.079	12.5	0.0	1.4	1	0	0	1	1	1	0	Extended	Signal	Peptide	of	Type	V	secretion	system
Acetyltransf_11	PF13720.1	gi|568164764|ref|YP_008946539.1|	-	0.11	12.7	0.0	0.13	12.4	0.0	1.1	1	0	0	1	1	1	0	Udp	N-acetylglucosamine	O-acyltransferase;	Domain	2
MFS_1	PF07690.11	gi|568163212|ref|YP_008946540.1|	-	9.9e-26	90.2	62.1	4.9e-21	74.8	20.8	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Peptidase_M1	PF01433.15	gi|568163213|ref|YP_008946541.1|	-	6.9e-114	380.9	0.1	9.7e-114	380.4	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	M1
Peptidase_MA_2	PF13485.1	gi|568163213|ref|YP_008946541.1|	-	1.3e-18	67.2	2.7	3.9e-18	65.7	0.2	2.2	2	0	0	2	2	2	1	Peptidase	MA	superfamily
ERAP1_C	PF11838.3	gi|568163213|ref|YP_008946541.1|	-	9.6e-14	51.3	0.0	1.6e-13	50.6	0.0	1.4	1	0	0	1	1	1	1	ERAP1-like	C-terminal	domain
tRNA-synt_1	PF00133.17	gi|568163214|ref|YP_008946542.1|	-	1.8e-58	198.0	0.0	9.9e-47	159.2	0.0	2.5	2	1	0	2	2	2	2	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1g	PF09334.6	gi|568163214|ref|YP_008946542.1|	-	3.1e-30	105.1	0.3	8.8e-14	50.9	0.0	4.0	4	0	0	4	4	4	3	tRNA	synthetases	class	I	(M)
Anticodon_1	PF08264.8	gi|568163214|ref|YP_008946542.1|	-	5.5e-20	71.6	1.1	1.4e-19	70.3	0.8	1.8	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1e	PF01406.14	gi|568163214|ref|YP_008946542.1|	-	1.9e-13	50.1	0.7	2.6e-05	23.4	0.0	3.3	3	2	0	3	3	3	2	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1_2	PF13603.1	gi|568163214|ref|YP_008946542.1|	-	6e-13	48.4	0.1	1.5e-12	47.2	0.0	1.6	2	0	0	2	2	2	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1f	PF01921.13	gi|568163214|ref|YP_008946542.1|	-	0.011	14.5	0.0	0.25	9.9	0.0	2.2	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(K)
tRNA-synt_1d	PF00750.14	gi|568163214|ref|YP_008946542.1|	-	0.035	12.9	0.0	0.074	11.8	0.0	1.5	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(R)
CENP-X	PF09415.5	gi|568163214|ref|YP_008946542.1|	-	0.035	13.9	0.0	0.087	12.6	0.0	1.6	1	0	0	1	1	1	0	CENP-S	associating	Centromere	protein	X
Radical_SAM	PF04055.16	gi|568163215|ref|YP_008946543.1|	-	3.2e-09	37.1	1.0	6.3e-09	36.2	0.0	1.9	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|568163215|ref|YP_008946543.1|	-	2.2e-08	34.3	0.2	6.7e-08	32.7	0.0	1.8	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|568163215|ref|YP_008946543.1|	-	3.2e-06	27.1	0.0	1.2e-05	25.2	0.0	1.9	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Peptidase_M20	PF01546.23	gi|568163216|ref|YP_008946544.1|	-	2.4e-29	102.2	0.0	3.2e-29	101.7	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|568163216|ref|YP_008946544.1|	-	3.8e-17	62.0	0.0	7.3e-17	61.1	0.0	1.5	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
DUF3349	PF11829.3	gi|568163216|ref|YP_008946544.1|	-	0.063	13.7	0.0	0.13	12.7	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3349)
14-3-3	PF00244.15	gi|568163217|ref|YP_008946545.1|	-	0.02	13.9	0.1	0.023	13.8	0.0	1.1	1	0	0	1	1	1	0	14-3-3	protein
ATP_bind_3	PF01171.15	gi|568163219|ref|YP_008946547.1|	-	1.4e-14	53.9	0.0	4.8e-14	52.2	0.0	1.7	1	1	0	1	1	1	1	PP-loop	family
ThiI	PF02568.9	gi|568163219|ref|YP_008946547.1|	-	0.00025	20.5	0.0	0.00047	19.6	0.0	1.5	1	0	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
PAPS_reduct	PF01507.14	gi|568163219|ref|YP_008946547.1|	-	0.00037	20.3	0.0	0.00075	19.3	0.0	1.5	1	0	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
RecR	PF02132.10	gi|568163219|ref|YP_008946547.1|	-	0.00074	18.9	3.5	0.0017	17.7	0.7	2.6	2	0	0	2	2	2	1	RecR	protein
tRNA_Me_trans	PF03054.11	gi|568163219|ref|YP_008946547.1|	-	0.0022	16.5	0.0	0.0049	15.4	0.0	1.5	1	1	0	1	1	1	1	tRNA	methyl	transferase
Usp	PF00582.21	gi|568163219|ref|YP_008946547.1|	-	0.004	17.3	0.0	0.53	10.4	0.0	2.8	2	1	1	3	3	3	1	Universal	stress	protein	family
NAD_synthase	PF02540.12	gi|568163219|ref|YP_008946547.1|	-	0.0091	14.9	0.0	0.014	14.3	0.0	1.3	1	0	0	1	1	1	1	NAD	synthase
Asn_synthase	PF00733.16	gi|568163219|ref|YP_008946547.1|	-	0.013	15.0	0.0	0.016	14.7	0.0	1.2	1	0	0	1	1	1	0	Asparagine	synthase
QueC	PF06508.8	gi|568163219|ref|YP_008946547.1|	-	0.028	13.7	0.0	0.19	10.9	0.0	2.1	2	0	0	2	2	2	0	Queuosine	biosynthesis	protein	QueC
DZR	PF12773.2	gi|568163219|ref|YP_008946547.1|	-	0.26	11.1	5.4	0.21	11.4	0.5	2.6	3	0	0	3	3	3	0	Double	zinc	ribbon
Serpin	PF00079.15	gi|568163220|ref|YP_008946548.1|	-	0.036	13.2	0.0	0.049	12.7	0.0	1.2	1	0	0	1	1	1	0	Serpin	(serine	protease	inhibitor)
SfsA	PF03749.8	gi|568163221|ref|YP_008946549.1|	-	6e-52	176.2	0.1	7.1e-52	176.0	0.1	1.1	1	0	0	1	1	1	1	Sugar	fermentation	stimulation	protein
SIR2	PF02146.12	gi|568163222|ref|YP_008946550.1|	-	7.5e-52	175.6	0.0	9.3e-52	175.3	0.0	1.1	1	0	0	1	1	1	1	Sir2	family
TPP_enzyme_M	PF00205.17	gi|568163222|ref|YP_008946550.1|	-	0.013	15.2	0.0	0.12	12.1	0.0	2.1	2	0	0	2	2	2	0	Thiamine	pyrophosphate	enzyme,	central	domain
XPG_I	PF00867.13	gi|568163222|ref|YP_008946550.1|	-	0.15	12.1	0.0	0.3	11.1	0.0	1.5	1	0	0	1	1	1	0	XPG	I-region
SSF	PF00474.12	gi|568163223|ref|YP_008946551.1|	-	2.1e-13	49.7	33.5	3.5e-13	48.9	23.2	1.4	1	0	0	1	1	1	1	Sodium:solute	symporter	family
Vma12	PF11712.3	gi|568163223|ref|YP_008946551.1|	-	0.84	9.3	7.0	13	5.4	0.1	3.8	3	0	0	3	3	3	0	Endoplasmic	reticulum-based	factor	for	assembly	of	V-ATPase
DUF2203	PF09969.4	gi|568163224|ref|YP_008946552.1|	-	5.9e-36	123.3	0.0	8.5e-36	122.8	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2203)
NAD_binding_2	PF03446.10	gi|568163225|ref|YP_008946553.1|	-	8.1e-36	123.3	0.2	1.2e-35	122.8	0.1	1.2	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_binding_11	PF14833.1	gi|568163225|ref|YP_008946553.1|	-	6.4e-28	97.2	0.0	1e-27	96.6	0.0	1.3	1	0	0	1	1	1	1	NAD-binding	of	NADP-dependent	3-hydroxyisobutyrate	dehydrogenase
F420_oxidored	PF03807.12	gi|568163225|ref|YP_008946553.1|	-	5.2e-07	30.0	0.0	2.1e-06	28.0	0.0	2.0	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
2-Hacid_dh_C	PF02826.14	gi|568163225|ref|YP_008946553.1|	-	0.00054	19.1	0.0	0.0012	18.0	0.0	1.6	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Shikimate_DH	PF01488.15	gi|568163225|ref|YP_008946553.1|	-	0.0013	18.8	0.0	0.0026	17.8	0.0	1.6	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
GFO_IDH_MocA	PF01408.17	gi|568163225|ref|YP_008946553.1|	-	0.018	15.5	0.0	0.043	14.3	0.0	1.6	2	0	0	2	2	2	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
BSD	PF03909.12	gi|568163225|ref|YP_008946553.1|	-	0.02	14.6	0.0	0.066	12.9	0.0	1.8	2	0	0	2	2	2	0	BSD	domain
UDPG_MGDP_dh_C	PF03720.10	gi|568163225|ref|YP_008946553.1|	-	0.023	14.8	0.1	0.093	12.8	0.0	1.9	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
NfI_DNAbd_pre-N	PF10524.4	gi|568163225|ref|YP_008946553.1|	-	0.087	12.4	0.0	0.67	9.5	0.0	2.1	2	0	0	2	2	2	0	Nuclear	factor	I	protein	pre-N-terminus
5-FTHF_cyc-lig	PF01812.15	gi|568163225|ref|YP_008946553.1|	-	0.13	11.9	0.0	0.21	11.3	0.0	1.3	1	0	0	1	1	1	0	5-formyltetrahydrofolate	cyclo-ligase	family
Rdx	PF10262.4	gi|568163227|ref|YP_008946555.1|	-	2.6e-20	72.2	0.0	2.9e-20	72.0	0.0	1.0	1	0	0	1	1	1	1	Rdx	family
ABC2_membrane	PF01061.19	gi|568163228|ref|YP_008946556.1|	-	2.7e-13	49.5	16.0	2.7e-13	49.5	11.1	2.4	3	0	0	3	3	3	1	ABC-2	type	transporter
ABC_tran	PF00005.22	gi|568163229|ref|YP_008946557.1|	-	1.9e-32	112.4	0.0	2.9e-32	111.8	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|568163229|ref|YP_008946557.1|	-	3.6e-16	59.9	0.0	5.5e-11	42.9	0.0	2.2	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|568163229|ref|YP_008946557.1|	-	0.00019	20.7	0.2	0.33	10.1	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|568163229|ref|YP_008946557.1|	-	0.00033	20.1	0.1	0.00075	18.9	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
SbcCD_C	PF13558.1	gi|568163229|ref|YP_008946557.1|	-	0.00069	19.4	0.0	0.008	16.0	0.0	2.4	2	1	0	2	2	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_15	PF13175.1	gi|568163229|ref|YP_008946557.1|	-	0.00073	18.6	0.0	0.17	10.8	0.0	2.2	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|568163229|ref|YP_008946557.1|	-	0.0011	19.3	3.8	0.0058	16.9	2.6	2.1	1	1	0	1	1	1	1	AAA	domain
SRP54	PF00448.17	gi|568163229|ref|YP_008946557.1|	-	0.003	17.0	0.2	0.0051	16.2	0.1	1.3	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
Thymidylate_kin	PF02223.12	gi|568163229|ref|YP_008946557.1|	-	0.0046	16.3	0.0	0.066	12.5	0.0	2.1	2	0	0	2	2	2	1	Thymidylate	kinase
AAA_25	PF13481.1	gi|568163229|ref|YP_008946557.1|	-	0.0072	15.7	0.0	0.018	14.4	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|568163229|ref|YP_008946557.1|	-	0.012	15.0	0.2	0.16	11.4	0.0	2.2	1	1	0	2	2	2	0	AAA-like	domain
AAA_22	PF13401.1	gi|568163229|ref|YP_008946557.1|	-	0.013	15.6	0.3	0.091	12.8	0.2	2.3	1	1	0	1	1	1	0	AAA	domain
AAA_19	PF13245.1	gi|568163229|ref|YP_008946557.1|	-	0.018	14.8	0.0	0.036	13.8	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
Ldh_1_C	PF02866.13	gi|568163229|ref|YP_008946557.1|	-	0.022	14.5	0.0	0.04	13.6	0.0	1.5	1	0	0	1	1	1	0	lactate/malate	dehydrogenase,	alpha/beta	C-terminal	domain
AAA_30	PF13604.1	gi|568163229|ref|YP_008946557.1|	-	0.022	14.3	0.0	0.045	13.3	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
UPF0079	PF02367.12	gi|568163229|ref|YP_008946557.1|	-	0.024	14.2	0.2	0.084	12.4	0.0	1.9	2	0	0	2	2	2	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_16	PF13191.1	gi|568163229|ref|YP_008946557.1|	-	0.024	14.6	0.0	0.051	13.5	0.0	1.6	1	1	0	1	1	1	0	AAA	ATPase	domain
Rad17	PF03215.10	gi|568163229|ref|YP_008946557.1|	-	0.026	13.2	0.0	0.038	12.6	0.0	1.3	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
AAA_13	PF13166.1	gi|568163229|ref|YP_008946557.1|	-	0.04	12.3	0.3	0.12	10.8	0.1	1.9	2	1	0	2	2	2	0	AAA	domain
T2SE	PF00437.15	gi|568163229|ref|YP_008946557.1|	-	0.05	12.5	0.0	0.075	11.9	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
IstB_IS21	PF01695.12	gi|568163229|ref|YP_008946557.1|	-	0.1	12.0	0.3	1.8	7.9	0.1	2.3	2	1	0	2	2	2	0	IstB-like	ATP	binding	protein
ATP_bind_1	PF03029.12	gi|568163229|ref|YP_008946557.1|	-	0.12	11.9	0.4	0.27	10.7	0.1	1.6	1	1	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
AAA_14	PF13173.1	gi|568163229|ref|YP_008946557.1|	-	0.12	12.2	0.2	2.7	7.9	0.1	2.4	1	1	0	2	2	2	0	AAA	domain
AAA	PF00004.24	gi|568163229|ref|YP_008946557.1|	-	0.12	12.5	2.3	1.2	9.3	1.6	2.6	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF87	PF01935.12	gi|568163229|ref|YP_008946557.1|	-	0.39	10.4	3.5	0.28	10.9	0.4	2.1	3	0	0	3	3	3	0	Domain	of	unknown	function	DUF87
AIRS_C	PF02769.17	gi|568163230|ref|YP_008946558.1|	-	1.2e-11	44.8	0.0	1.9e-11	44.2	0.0	1.2	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|568163230|ref|YP_008946558.1|	-	6.8e-09	35.8	0.0	1.4e-08	34.8	0.0	1.5	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
NTP_transf_3	PF12804.2	gi|568163231|ref|YP_008946559.1|	-	6.5e-09	36.0	0.0	1.5e-08	34.8	0.0	1.5	1	1	0	1	1	1	1	MobA-like	NTP	transferase	domain
NTP_transferase	PF00483.18	gi|568163231|ref|YP_008946559.1|	-	0.078	12.2	0.0	0.1	11.9	0.0	1.2	1	0	0	1	1	1	0	Nucleotidyl	transferase
DUF460	PF04312.8	gi|568163231|ref|YP_008946559.1|	-	0.15	11.6	0.0	0.21	11.1	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF460)
DUF1614	PF07758.6	gi|568163232|ref|YP_008946560.1|	-	3.9e-49	166.7	12.2	6.1e-49	166.1	8.4	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1614)
Pkr1	PF08636.5	gi|568163232|ref|YP_008946560.1|	-	1.3	9.1	15.7	0.27	11.3	1.0	3.2	2	1	0	2	2	2	0	ER	protein	Pkr1
TP_methylase	PF00590.15	gi|568163233|ref|YP_008946562.1|	-	1.9e-41	142.0	0.5	2.3e-41	141.7	0.4	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
TP_methylase	PF00590.15	gi|568163234|ref|YP_008946563.1|	-	7.1e-34	117.3	0.0	8.6e-34	117.0	0.0	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
Methyltransf_18	PF12847.2	gi|568163235|ref|YP_008946564.1|	-	3.3e-12	46.9	0.0	4.8e-12	46.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|568163235|ref|YP_008946564.1|	-	3.8e-12	46.0	0.0	5.1e-12	45.6	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|568163235|ref|YP_008946564.1|	-	2e-09	37.2	0.4	5.5e-09	35.8	0.1	1.7	1	1	1	2	2	2	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
MTS	PF05175.9	gi|568163235|ref|YP_008946564.1|	-	7.2e-08	31.9	0.0	1.6e-07	30.9	0.0	1.5	2	0	0	2	2	2	1	Methyltransferase	small	domain
Methyltransf_3	PF01596.12	gi|568163235|ref|YP_008946564.1|	-	1.8e-07	30.4	0.1	2.9e-07	29.7	0.1	1.3	1	1	0	1	1	1	1	O-methyltransferase
PrmA	PF06325.8	gi|568163235|ref|YP_008946564.1|	-	3.2e-07	29.7	0.4	4.5e-07	29.2	0.3	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Cons_hypoth95	PF03602.10	gi|568163235|ref|YP_008946564.1|	-	1.1e-06	28.1	0.0	1.5e-06	27.7	0.0	1.3	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltransf_26	PF13659.1	gi|568163235|ref|YP_008946564.1|	-	1.5e-06	28.2	0.0	1.7e-06	28.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
GidB	PF02527.10	gi|568163235|ref|YP_008946564.1|	-	2e-06	27.0	0.2	2.9e-06	26.5	0.1	1.3	1	1	0	1	1	1	1	rRNA	small	subunit	methyltransferase	G
Ubie_methyltran	PF01209.13	gi|568163235|ref|YP_008946564.1|	-	4e-06	26.1	0.0	4.5e-06	25.9	0.0	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_24	PF13578.1	gi|568163235|ref|YP_008946564.1|	-	5.4e-06	27.1	0.0	7.6e-06	26.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
GCD14	PF08704.5	gi|568163235|ref|YP_008946564.1|	-	2.5e-05	23.9	0.0	3.1e-05	23.5	0.0	1.1	1	0	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
Met_10	PF02475.11	gi|568163235|ref|YP_008946564.1|	-	0.00014	21.4	0.1	0.00017	21.2	0.0	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_4	PF02390.12	gi|568163235|ref|YP_008946564.1|	-	0.00026	20.1	0.0	0.0004	19.4	0.0	1.3	1	0	0	1	1	1	1	Putative	methyltransferase
UPF0020	PF01170.13	gi|568163235|ref|YP_008946564.1|	-	0.0016	18.0	0.1	0.0031	17.0	0.0	1.5	2	0	0	2	2	2	1	Putative	RNA	methylase	family	UPF0020
RrnaAD	PF00398.15	gi|568163235|ref|YP_008946564.1|	-	0.0017	17.4	0.0	0.0025	16.8	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
CMAS	PF02353.15	gi|568163235|ref|YP_008946564.1|	-	0.0021	17.2	0.0	0.0035	16.4	0.0	1.4	1	1	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_25	PF13649.1	gi|568163235|ref|YP_008946564.1|	-	0.0031	17.8	0.0	0.0046	17.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|568163235|ref|YP_008946564.1|	-	0.0051	16.3	0.0	0.0072	15.8	0.0	1.2	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
G3P_antiterm	PF04309.7	gi|568163235|ref|YP_008946564.1|	-	0.0068	15.4	0.2	0.013	14.5	0.1	1.5	1	1	0	1	1	1	1	Glycerol-3-phosphate	responsive	antiterminator
Methyltransf_11	PF08241.7	gi|568163235|ref|YP_008946564.1|	-	0.016	15.6	0.0	0.025	15.0	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
Fibrillarin	PF01269.12	gi|568163235|ref|YP_008946564.1|	-	0.017	14.0	0.1	0.029	13.2	0.0	1.4	1	1	0	1	1	1	0	Fibrillarin
Methyltransf_12	PF08242.7	gi|568163235|ref|YP_008946564.1|	-	0.018	15.5	0.0	0.03	14.8	0.0	1.4	1	1	0	1	1	1	0	Methyltransferase	domain
DOT1	PF08123.8	gi|568163235|ref|YP_008946564.1|	-	0.029	13.6	0.0	0.047	12.9	0.0	1.3	1	0	0	1	1	1	0	Histone	methylation	protein	DOT1
Methyltransf_23	PF13489.1	gi|568163235|ref|YP_008946564.1|	-	0.04	13.6	0.0	0.044	13.4	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_5	PF01795.14	gi|568163235|ref|YP_008946564.1|	-	0.044	13.0	0.0	0.058	12.6	0.0	1.3	1	0	0	1	1	1	0	MraW	methylase	family
Methyltransf_16	PF10294.4	gi|568163235|ref|YP_008946564.1|	-	0.062	12.7	0.1	0.13	11.6	0.0	1.5	2	0	0	2	2	2	0	Putative	methyltransferase
TRM	PF02005.11	gi|568163235|ref|YP_008946564.1|	-	0.099	11.5	0.0	0.19	10.5	0.0	1.4	2	0	0	2	2	2	0	N2,N2-dimethylguanosine	tRNA	methyltransferase
CbiD	PF01888.12	gi|568163236|ref|YP_008946565.1|	-	1.6e-62	210.8	2.8	2.3e-62	210.3	1.9	1.2	1	0	0	1	1	1	1	CbiD
TP_methylase	PF00590.15	gi|568163237|ref|YP_008946566.1|	-	4.3e-37	127.8	0.1	5e-37	127.6	0.1	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
CbiC	PF02570.10	gi|568163238|ref|YP_008946567.1|	-	1.3e-53	181.3	0.4	1.8e-53	180.9	0.3	1.2	1	0	0	1	1	1	1	Precorrin-8X	methylmutase
CbiX	PF01903.12	gi|568163238|ref|YP_008946567.1|	-	1.1e-16	60.8	0.0	2.6e-16	59.6	0.0	1.7	1	0	0	1	1	1	1	CbiX
HTH_10	PF04967.7	gi|568163238|ref|YP_008946567.1|	-	0.14	11.7	0.4	2.3	7.8	0.1	2.6	2	0	0	2	2	2	0	HTH	DNA	binding	domain
TP_methylase	PF00590.15	gi|568163239|ref|YP_008946568.1|	-	1e-31	110.2	0.0	1.2e-31	110.1	0.0	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
CbiG_N	PF11760.3	gi|568163240|ref|YP_008946569.1|	-	1.9e-30	104.4	0.0	4.1e-30	103.3	0.0	1.6	1	0	0	1	1	1	1	Cobalamin	synthesis	G	N-terminal
CbiG_C	PF01890.11	gi|568163240|ref|YP_008946569.1|	-	5.6e-18	65.3	0.3	1.3e-17	64.1	0.0	1.7	2	0	0	2	2	2	1	Cobalamin	synthesis	G	C-terminus
CbiG_mid	PF11761.3	gi|568163240|ref|YP_008946569.1|	-	0.16	12.2	0.0	0.28	11.4	0.0	1.5	1	0	0	1	1	1	0	Cobalamin	biosynthesis	central	region
Asparaginase_2	PF01112.13	gi|568163241|ref|YP_008946570.1|	-	5.9e-56	189.5	5.8	4.6e-35	120.8	1.4	2.0	1	1	1	2	2	2	2	Asparaginase
CBM_4_9	PF02018.12	gi|568164767|ref|YP_008946572.1|	-	0.089	12.8	1.3	0.13	12.2	0.9	1.4	1	1	0	1	1	1	0	Carbohydrate	binding	domain
DUF1107	PF06526.7	gi|568164769|ref|YP_008946574.1|	-	0.022	14.5	0.0	0.21	11.4	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1107)
ADH_N	PF08240.7	gi|568163242|ref|YP_008946576.1|	-	2.9e-25	88.1	1.4	4.6e-25	87.5	0.2	1.8	2	0	0	2	2	2	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|568163242|ref|YP_008946576.1|	-	3.4e-22	78.3	0.0	7.1e-22	77.3	0.0	1.6	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
DUF4147	PF13660.1	gi|568163242|ref|YP_008946576.1|	-	0.027	13.5	0.2	0.19	10.8	0.1	2.2	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4147)
Fer4_17	PF13534.1	gi|568163242|ref|YP_008946576.1|	-	0.047	14.0	2.0	0.061	13.6	0.4	1.8	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Shikimate_DH	PF01488.15	gi|568163242|ref|YP_008946576.1|	-	0.061	13.4	0.1	0.19	11.8	0.0	1.8	2	0	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
Fer4_8	PF13183.1	gi|568163242|ref|YP_008946576.1|	-	0.077	13.0	1.6	0.1	12.6	0.3	1.7	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
CobS	PF02654.10	gi|568163243|ref|YP_008946577.1|	-	4.6e-29	101.6	11.9	5.6e-29	101.3	8.3	1.0	1	0	0	1	1	1	1	Cobalamin-5-phosphate	synthase
GATase_3	PF07685.9	gi|568163244|ref|YP_008946578.1|	-	6.8e-25	87.5	0.0	1.1e-24	86.8	0.0	1.3	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
CbiA	PF01656.18	gi|568163244|ref|YP_008946578.1|	-	2.3e-12	46.7	0.0	4.2e-12	45.8	0.0	1.4	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_26	PF13500.1	gi|568163244|ref|YP_008946578.1|	-	2.4e-10	40.3	0.0	1.8e-07	30.9	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
GATase	PF00117.23	gi|568163244|ref|YP_008946578.1|	-	0.00071	19.0	0.0	0.0011	18.4	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
SNO	PF01174.14	gi|568163244|ref|YP_008946578.1|	-	0.0072	15.9	0.0	0.013	15.1	0.0	1.3	1	0	0	1	1	1	1	SNO	glutamine	amidotransferase	family
GMP_synt_C	PF00958.17	gi|568163245|ref|YP_008946579.1|	-	1.2e-22	79.4	0.7	3.5e-22	77.9	0.5	1.9	1	1	0	1	1	1	1	GMP	synthase	C	terminal	domain
NAD_synthase	PF02540.12	gi|568163245|ref|YP_008946579.1|	-	1.1e-12	47.4	0.2	7.5e-12	44.6	0.1	2.1	1	1	0	1	1	1	1	NAD	synthase
ATP_bind_3	PF01171.15	gi|568163245|ref|YP_008946579.1|	-	9.3e-08	31.7	0.0	1.5e-07	31.1	0.0	1.3	1	0	0	1	1	1	1	PP-loop	family
QueC	PF06508.8	gi|568163245|ref|YP_008946579.1|	-	1e-06	28.1	0.0	7.4e-05	22.1	0.0	2.3	1	1	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
DUF1152	PF06626.7	gi|568163245|ref|YP_008946579.1|	-	0.00024	20.3	1.0	0.00056	19.1	0.0	2.1	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF1152)
ThiI	PF02568.9	gi|568163245|ref|YP_008946579.1|	-	0.0073	15.7	0.1	0.02	14.3	0.0	1.8	1	1	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
Arginosuc_synth	PF00764.14	gi|568163245|ref|YP_008946579.1|	-	0.013	14.5	0.0	0.022	13.8	0.0	1.4	1	0	0	1	1	1	0	Arginosuccinate	synthase
tRNA_Me_trans	PF03054.11	gi|568163245|ref|YP_008946579.1|	-	0.034	12.7	0.0	0.68	8.4	0.0	2.2	2	0	0	2	2	2	0	tRNA	methyl	transferase
DUF2392	PF10288.4	gi|568163245|ref|YP_008946579.1|	-	0.05	13.9	0.0	0.2	12.0	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2392)
Asn_synthase	PF00733.16	gi|568163245|ref|YP_008946579.1|	-	0.11	11.9	0.0	0.21	11.0	0.0	1.5	1	1	0	1	1	1	0	Asparagine	synthase
Latarcin	PF10279.4	gi|568163245|ref|YP_008946579.1|	-	0.28	11.4	2.7	3.1	8.0	0.1	3.1	3	0	0	3	3	3	0	Latarcin	precursor
Peptidase_M48	PF01435.13	gi|568163246|ref|YP_008946580.1|	-	2.1e-25	89.6	0.0	3.7e-25	88.8	0.0	1.5	1	1	0	1	1	1	1	Peptidase	family	M48
Peptidase_M56	PF05569.6	gi|568163246|ref|YP_008946580.1|	-	0.029	13.3	0.2	0.029	13.3	0.2	1.9	2	1	0	2	2	2	0	BlaR1	peptidase	M56
Polysacc_synt_3	PF13440.1	gi|568163247|ref|YP_008946581.1|	-	5e-20	72.0	31.4	5e-20	72.0	21.8	2.6	2	1	0	2	2	2	1	Polysaccharide	biosynthesis	protein
DeoC	PF01791.4	gi|568163248|ref|YP_008946582.1|	-	4e-34	117.9	0.0	4.6e-34	117.7	0.0	1.0	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
Peripla_BP_4	PF13407.1	gi|568163248|ref|YP_008946582.1|	-	0.025	13.9	0.2	0.07	12.4	0.1	1.7	1	1	0	1	1	1	0	Periplasmic	binding	protein	domain
AP_endonuc_2	PF01261.19	gi|568163248|ref|YP_008946582.1|	-	0.09	12.0	0.0	0.22	10.7	0.0	1.7	2	0	0	2	2	2	0	Xylose	isomerase-like	TIM	barrel
PMT_2	PF13231.1	gi|568163249|ref|YP_008946583.1|	-	1.6e-07	31.3	15.6	1.6e-07	31.3	10.8	3.1	3	1	0	3	3	3	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
PMT	PF02366.13	gi|568163249|ref|YP_008946583.1|	-	0.11	11.8	28.5	0.2	10.9	14.1	4.0	2	1	0	2	2	2	0	Dolichyl-phosphate-mannose-protein	mannosyltransferase
NTP_transferase	PF00483.18	gi|568163250|ref|YP_008946584.1|	-	1.2e-28	100.0	0.0	1.5e-28	99.7	0.0	1.0	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|568163250|ref|YP_008946584.1|	-	7.7e-09	35.8	0.0	8.8e-09	35.6	0.0	1.3	1	1	0	1	1	1	1	MobA-like	NTP	transferase	domain
Epimerase	PF01370.16	gi|568163251|ref|YP_008946585.1|	-	3.2e-22	79.1	0.0	4.6e-22	78.5	0.0	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|568163251|ref|YP_008946585.1|	-	0.00038	19.4	0.0	0.0017	17.2	0.0	2.1	1	1	0	1	1	1	1	RmlD	substrate	binding	domain
UDPG_MGDP_dh_N	PF03721.9	gi|568163251|ref|YP_008946585.1|	-	0.0005	19.4	0.0	0.00092	18.6	0.0	1.4	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Polysacc_synt_2	PF02719.10	gi|568163251|ref|YP_008946585.1|	-	0.0038	16.1	0.0	0.0073	15.2	0.0	1.4	1	0	0	1	1	1	1	Polysaccharide	biosynthesis	protein
KR	PF08659.5	gi|568163251|ref|YP_008946585.1|	-	0.14	11.8	0.0	0.35	10.5	0.0	1.6	2	0	0	2	2	2	0	KR	domain
BcrAD_BadFG	PF01869.15	gi|568163252|ref|YP_008946586.1|	-	5e-43	147.3	1.7	5.6e-43	147.1	1.2	1.0	1	0	0	1	1	1	1	BadF/BadG/BcrA/BcrD	ATPase	family
G_glu_transpept	PF01019.16	gi|568163253|ref|YP_008946587.1|	-	2.7e-89	299.9	0.0	3.9e-89	299.4	0.0	1.3	1	0	0	1	1	1	1	Gamma-glutamyltranspeptidase
MazG	PF03819.12	gi|568163255|ref|YP_008946589.1|	-	4.3e-15	55.4	0.7	5.8e-15	55.0	0.5	1.2	1	0	0	1	1	1	1	MazG	nucleotide	pyrophosphohydrolase	domain
PRA-PH	PF01503.12	gi|568163255|ref|YP_008946589.1|	-	0.00013	22.1	2.3	0.00024	21.3	0.8	1.7	1	1	1	2	2	2	1	Phosphoribosyl-ATP	pyrophosphohydrolase
MazG-like	PF12643.2	gi|568163255|ref|YP_008946589.1|	-	0.00093	19.0	0.3	0.0012	18.7	0.0	1.3	2	0	0	2	2	2	1	MazG-like	family
UpxZ	PF06603.6	gi|568163255|ref|YP_008946589.1|	-	0.025	14.5	0.1	0.028	14.4	0.0	1.1	1	0	0	1	1	1	0	UpxZ	family	of	transcription	anti-terminator	antagonists
Helicase_RecD	PF05127.9	gi|568163256|ref|YP_008946590.1|	-	1.2e-47	161.8	0.0	1.9e-47	161.1	0.0	1.4	1	0	0	1	1	1	1	Helicase
GNAT_acetyltr_2	PF13718.1	gi|568163256|ref|YP_008946590.1|	-	8e-42	142.7	0.0	3.9e-41	140.5	0.0	2.0	1	1	0	1	1	1	1	GNAT	acetyltransferase	2
DUF1726	PF08351.6	gi|568163256|ref|YP_008946590.1|	-	3.5e-24	84.3	0.1	8.1e-24	83.1	0.0	1.7	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1726)
Acetyltransf_7	PF13508.1	gi|568163256|ref|YP_008946590.1|	-	5.8e-06	26.3	0.0	3.2e-05	23.9	0.0	2.3	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.19	gi|568163256|ref|YP_008946590.1|	-	4.6e-05	23.3	0.0	0.00013	21.9	0.0	1.8	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
tRNA_bind_2	PF13725.1	gi|568163256|ref|YP_008946590.1|	-	0.0016	18.5	0.0	0.0052	16.8	0.0	1.9	1	1	0	1	1	1	1	Possible	tRNA	binding	domain
YfhO	PF09586.5	gi|568163257|ref|YP_008946591.1|	-	6.5	4.6	9.8	8.2	4.3	6.8	1.1	1	0	0	1	1	1	0	Bacterial	membrane	protein	YfhO
YfdX	PF10938.3	gi|568163258|ref|YP_008946592.1|	-	0.014	15.0	0.2	0.051	13.2	0.1	1.6	1	1	0	1	1	1	0	YfdX	protein
Exonuc_VII_S	PF02609.11	gi|568163258|ref|YP_008946592.1|	-	0.026	14.2	0.4	0.16	11.7	0.0	2.3	2	1	0	2	2	2	0	Exonuclease	VII	small	subunit
DUF566	PF04484.7	gi|568163258|ref|YP_008946592.1|	-	0.078	12.4	0.0	0.087	12.3	0.0	1.1	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF566)
23S_rRNA_IVP	PF05635.6	gi|568163258|ref|YP_008946592.1|	-	0.093	12.6	0.1	0.14	12.1	0.1	1.2	1	0	0	1	1	1	0	23S	rRNA-intervening	sequence	protein
ISG65-75	PF11727.3	gi|568163258|ref|YP_008946592.1|	-	0.099	11.6	0.1	0.12	11.4	0.1	1.0	1	0	0	1	1	1	0	Invariant	surface	glycoprotein
AA_permease	PF00324.16	gi|568163259|ref|YP_008946593.1|	-	3.4e-13	48.7	43.5	9.8e-13	47.2	29.0	2.2	1	1	0	1	1	1	1	Amino	acid	permease
AA_permease_2	PF13520.1	gi|568163259|ref|YP_008946593.1|	-	5e-13	48.3	48.5	1.3e-12	47.0	33.7	1.5	1	1	0	1	1	1	1	Amino	acid	permease
DUF2583	PF10762.4	gi|568163259|ref|YP_008946593.1|	-	0.0092	16.0	6.5	0.24	11.5	0.6	3.3	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF2583)
PHO4	PF01384.15	gi|568163260|ref|YP_008946594.1|	-	0.00092	17.9	2.6	0.001	17.8	1.8	1.0	1	0	0	1	1	1	1	Phosphate	transporter	family
DsbB	PF02600.11	gi|568163260|ref|YP_008946594.1|	-	0.0055	16.5	1.9	0.0059	16.4	1.3	1.0	1	0	0	1	1	1	1	Disulfide	bond	formation	protein	DsbB
PrgI	PF12666.2	gi|568163260|ref|YP_008946594.1|	-	0.017	15.2	1.2	0.018	15.1	0.9	1.1	1	0	0	1	1	1	0	PrgI	family	protein
DUF2614	PF11023.3	gi|568163260|ref|YP_008946594.1|	-	0.041	13.6	2.1	0.049	13.4	1.4	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2614)
Peptidase_U4	PF03419.8	gi|568163260|ref|YP_008946594.1|	-	0.16	11.0	1.3	0.17	10.9	0.9	1.0	1	0	0	1	1	1	0	Sporulation	factor	SpoIIGA
DUF2964	PF11177.3	gi|568163260|ref|YP_008946594.1|	-	0.22	11.4	2.1	8.2	6.4	0.2	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2964)
DUF3040	PF11239.3	gi|568163260|ref|YP_008946594.1|	-	0.62	10.1	2.7	0.72	9.9	1.9	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3040)
Claudin_2	PF13903.1	gi|568163260|ref|YP_008946594.1|	-	0.94	9.1	3.8	1.1	8.9	2.7	1.0	1	0	0	1	1	1	0	PMP-22/EMP/MP20/Claudin	tight	junction
PsbT	PF01405.12	gi|568163260|ref|YP_008946594.1|	-	4.8	6.8	8.3	19	4.9	2.4	2.3	2	0	0	2	2	2	0	Photosystem	II	reaction	centre	T	protein
ABC_tran	PF00005.22	gi|568163261|ref|YP_008946595.1|	-	2.3e-27	95.9	0.0	3.4e-27	95.4	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|568163261|ref|YP_008946595.1|	-	2.9e-20	72.3	0.0	5.1e-20	71.5	0.0	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|568163261|ref|YP_008946595.1|	-	2.6e-08	34.1	0.2	5.1e-05	23.3	0.0	2.3	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|568163261|ref|YP_008946595.1|	-	0.00095	18.4	0.4	0.012	14.8	0.2	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_22	PF13401.1	gi|568163261|ref|YP_008946595.1|	-	0.0011	19.0	0.4	0.13	12.3	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|568163261|ref|YP_008946595.1|	-	0.0035	17.3	0.0	0.0046	16.9	0.0	1.3	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_10	PF12846.2	gi|568163261|ref|YP_008946595.1|	-	0.013	14.9	0.2	1.8	7.8	0.0	2.2	1	1	0	2	2	2	0	AAA-like	domain
AAA_29	PF13555.1	gi|568163261|ref|YP_008946595.1|	-	0.017	14.6	0.1	0.035	13.6	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
KaiC	PF06745.8	gi|568163261|ref|YP_008946595.1|	-	0.022	13.8	0.5	0.034	13.2	0.0	1.5	2	0	0	2	2	2	0	KaiC
NB-ARC	PF00931.17	gi|568163261|ref|YP_008946595.1|	-	0.027	13.3	0.5	0.051	12.4	0.4	1.4	1	0	0	1	1	1	0	NB-ARC	domain
AAA_15	PF13175.1	gi|568163261|ref|YP_008946595.1|	-	0.044	12.8	1.3	0.85	8.5	0.0	2.4	3	0	0	3	3	3	0	AAA	ATPase	domain
T2SE	PF00437.15	gi|568163261|ref|YP_008946595.1|	-	0.075	11.9	0.0	0.12	11.2	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
DUF258	PF03193.11	gi|568163261|ref|YP_008946595.1|	-	0.078	12.1	0.1	0.13	11.4	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
ABC_tran	PF00005.22	gi|568163262|ref|YP_008946596.1|	-	2.2e-25	89.5	0.0	2.9e-25	89.1	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|568163262|ref|YP_008946596.1|	-	7.9e-20	70.9	0.0	1.3e-19	70.3	0.0	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|568163262|ref|YP_008946596.1|	-	2.7e-14	53.8	2.9	7.2e-12	45.8	0.2	2.1	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|568163262|ref|YP_008946596.1|	-	1.6e-06	27.5	0.6	0.00032	19.9	0.1	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|568163262|ref|YP_008946596.1|	-	3.2e-05	23.3	0.3	7.2e-05	22.2	0.0	1.7	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.1	gi|568163262|ref|YP_008946596.1|	-	0.00095	18.3	0.4	0.026	13.5	0.1	2.1	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_10	PF12846.2	gi|568163262|ref|YP_008946596.1|	-	0.0087	15.5	0.1	0.73	9.2	0.0	2.3	2	0	0	2	2	2	1	AAA-like	domain
AAA_25	PF13481.1	gi|568163262|ref|YP_008946596.1|	-	0.018	14.4	0.1	0.23	10.8	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
AAA_23	PF13476.1	gi|568163262|ref|YP_008946596.1|	-	0.062	13.6	0.0	0.12	12.6	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_17	PF13207.1	gi|568163262|ref|YP_008946596.1|	-	0.12	13.2	0.4	1.2	10.0	0.3	2.2	1	1	0	1	1	1	0	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|568163262|ref|YP_008946596.1|	-	0.15	11.4	0.1	0.31	10.4	0.0	1.4	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
AAA_18	PF13238.1	gi|568163262|ref|YP_008946596.1|	-	0.18	12.1	1.0	1	9.6	0.7	2.2	1	1	0	1	1	1	0	AAA	domain
BPD_transp_1	PF00528.17	gi|568163263|ref|YP_008946597.1|	-	8.5e-13	48.2	17.8	8.5e-13	48.2	12.4	1.9	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.2	gi|568163263|ref|YP_008946597.1|	-	0.019	14.3	0.3	0.074	12.4	0.2	2.1	1	0	0	1	1	1	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
BPD_transp_1	PF00528.17	gi|568163264|ref|YP_008946598.1|	-	2.9e-36	124.7	13.4	2.9e-36	124.7	9.3	2.5	2	1	1	3	3	3	1	Binding-protein-dependent	transport	system	inner	membrane	component
DUF2547	PF10818.3	gi|568163264|ref|YP_008946598.1|	-	1.6	9.4	4.5	0.5	11.0	1.1	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2547)
FixP_N	PF14715.1	gi|568163264|ref|YP_008946598.1|	-	2	7.8	9.3	4.9	6.6	0.1	3.7	3	0	0	3	3	3	0	N-terminal	domain	of	cytochrome	oxidase-cbb3,	FixP
SBP_bac_5	PF00496.17	gi|568163265|ref|YP_008946599.1|	-	5.8e-22	78.0	0.1	1.1e-15	57.4	0.0	3.3	3	0	0	3	3	3	3	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
A2M_N	PF01835.14	gi|568163265|ref|YP_008946599.1|	-	0.00069	19.8	0.1	0.003	17.7	0.0	2.1	2	0	0	2	2	2	1	MG2	domain
Cna_B	PF05738.8	gi|568163265|ref|YP_008946599.1|	-	0.001	18.7	0.1	0.0039	16.9	0.0	2.0	1	0	0	1	1	1	1	Cna	protein	B-type	domain
FlgD_ig	PF13860.1	gi|568163265|ref|YP_008946599.1|	-	0.0031	17.2	0.1	0.0082	15.8	0.1	1.7	1	0	0	1	1	1	1	FlgD	Ig-like	domain
DUF912	PF06024.7	gi|568163265|ref|YP_008946599.1|	-	0.013	15.5	0.0	0.035	14.1	0.0	1.7	1	0	0	1	1	1	0	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF912)
Wzt_C	PF14524.1	gi|568163265|ref|YP_008946599.1|	-	0.019	14.6	0.0	0.046	13.4	0.0	1.6	1	0	0	1	1	1	0	Wzt	C-terminal	domain
Rifin_STEVOR	PF02009.11	gi|568163265|ref|YP_008946599.1|	-	0.04	13.5	1.4	0.064	12.8	1.0	1.3	1	0	0	1	1	1	0	Rifin/stevor	family
Shisa	PF13908.1	gi|568163265|ref|YP_008946599.1|	-	0.064	13.4	0.9	0.14	12.3	0.6	1.6	1	0	0	1	1	1	0	Wnt	and	FGF	inhibitory	regulator
TMEM154	PF15102.1	gi|568163265|ref|YP_008946599.1|	-	0.26	10.9	5.8	0.52	10.0	4.1	1.5	1	0	0	1	1	1	0	TMEM154	protein	family
EphA2_TM	PF14575.1	gi|568163265|ref|YP_008946599.1|	-	4.2	7.8	5.6	64	4.0	0.0	2.7	2	1	0	2	2	2	0	Ephrin	type-A	receptor	2	transmembrane	domain
PCMT	PF01135.14	gi|568163266|ref|YP_008946600.1|	-	4.3e-42	144.0	0.0	5.4e-42	143.7	0.0	1.0	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_18	PF12847.2	gi|568163266|ref|YP_008946600.1|	-	2.9e-08	34.2	0.0	4.3e-08	33.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|568163266|ref|YP_008946600.1|	-	8e-08	31.6	0.0	1.3e-07	30.9	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_26	PF13659.1	gi|568163266|ref|YP_008946600.1|	-	6.4e-07	29.4	0.0	9e-07	28.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|568163266|ref|YP_008946600.1|	-	4.2e-06	26.4	0.0	5.3e-06	26.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|568163266|ref|YP_008946600.1|	-	3.8e-05	22.9	0.0	5.3e-05	22.4	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
MTS	PF05175.9	gi|568163266|ref|YP_008946600.1|	-	7e-05	22.2	0.0	0.00011	21.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
GCD14	PF08704.5	gi|568163266|ref|YP_008946600.1|	-	0.00011	21.7	0.0	0.00017	21.2	0.0	1.2	1	0	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
DOT1	PF08123.8	gi|568163266|ref|YP_008946600.1|	-	0.00013	21.3	0.1	0.0002	20.7	0.1	1.2	1	0	0	1	1	1	1	Histone	methylation	protein	DOT1
Methyltransf_23	PF13489.1	gi|568163266|ref|YP_008946600.1|	-	0.00014	21.6	0.0	0.00021	21.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_3	PF01596.12	gi|568163266|ref|YP_008946600.1|	-	0.00035	19.6	0.0	0.00052	19.1	0.0	1.2	1	0	0	1	1	1	1	O-methyltransferase
Fibrillarin	PF01269.12	gi|568163266|ref|YP_008946600.1|	-	0.0068	15.3	0.0	0.011	14.6	0.0	1.3	1	0	0	1	1	1	1	Fibrillarin
Methyltransf_11	PF08241.7	gi|568163266|ref|YP_008946600.1|	-	0.0082	16.6	0.0	0.019	15.4	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|568163266|ref|YP_008946600.1|	-	0.016	15.5	0.0	0.026	14.8	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
CMAS	PF02353.15	gi|568163266|ref|YP_008946600.1|	-	0.02	13.9	0.0	0.049	12.6	0.0	1.5	2	0	0	2	2	2	0	Mycolic	acid	cyclopropane	synthetase
Met_10	PF02475.11	gi|568163266|ref|YP_008946600.1|	-	0.071	12.6	0.0	0.1	12.1	0.0	1.3	1	0	0	1	1	1	0	Met-10+	like-protein
Methyltransf_24	PF13578.1	gi|568163266|ref|YP_008946600.1|	-	0.096	13.5	0.0	0.17	12.7	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_4	PF02390.12	gi|568163266|ref|YP_008946600.1|	-	0.11	11.5	0.0	0.15	11.0	0.0	1.4	1	0	0	1	1	1	0	Putative	methyltransferase
DUF87	PF01935.12	gi|568163267|ref|YP_008946601.1|	-	5.4e-17	62.3	4.3	3e-16	59.9	0.8	2.6	1	1	1	2	2	2	1	Domain	of	unknown	function	DUF87
AAA_10	PF12846.2	gi|568163267|ref|YP_008946601.1|	-	3.3e-12	46.4	0.6	8.2e-12	45.1	0.5	1.6	1	1	0	1	1	1	1	AAA-like	domain
FtsK_SpoIIIE	PF01580.13	gi|568163267|ref|YP_008946601.1|	-	4.8e-06	26.1	0.1	0.052	13.0	0.0	2.2	2	0	0	2	2	2	2	FtsK/SpoIIIE	family
Zot	PF05707.7	gi|568163267|ref|YP_008946601.1|	-	0.015	14.7	0.1	0.044	13.2	0.0	1.8	2	0	0	2	2	2	0	Zonular	occludens	toxin	(Zot)
DEAD	PF00270.24	gi|568163267|ref|YP_008946601.1|	-	0.04	13.4	0.0	2.6	7.4	0.0	2.4	2	0	0	2	2	2	0	DEAD/DEAH	box	helicase
NurA	PF09376.5	gi|568163268|ref|YP_008946602.1|	-	4.7e-16	59.0	0.2	3.8e-08	33.1	0.0	2.1	1	1	1	2	2	2	2	NurA	domain
Aldolase_2	PF10120.4	gi|568163269|ref|YP_008946603.1|	-	2.2e-45	154.0	0.3	3.7e-45	153.3	0.2	1.3	1	0	0	1	1	1	1	Putative	aldolase
HTH_3	PF01381.17	gi|568163269|ref|YP_008946603.1|	-	0.001	18.8	0.2	0.003	17.3	0.1	1.8	1	0	0	1	1	1	1	Helix-turn-helix
HTH_37	PF13744.1	gi|568163269|ref|YP_008946603.1|	-	0.0012	18.5	0.0	0.0027	17.4	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
RepB	PF07506.6	gi|568163269|ref|YP_008946603.1|	-	0.0016	18.3	0.0	0.007	16.2	0.0	2.0	2	1	0	2	2	2	1	RepB	plasmid	partitioning	protein
HTH_38	PF13936.1	gi|568163269|ref|YP_008946603.1|	-	0.0021	17.5	1.1	0.0047	16.4	0.1	2.2	2	1	1	3	3	3	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|568163269|ref|YP_008946603.1|	-	0.0074	15.9	0.0	0.02	14.5	0.0	1.7	1	0	0	1	1	1	1	Homeodomain-like	domain
MA3	PF02847.12	gi|568163269|ref|YP_008946603.1|	-	0.011	15.3	1.6	0.016	14.8	0.1	1.9	2	0	0	2	2	2	0	MA3	domain
Sigma70_r4	PF04545.11	gi|568163269|ref|YP_008946603.1|	-	0.013	14.7	0.0	0.029	13.6	0.0	1.6	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_24	PF13412.1	gi|568163269|ref|YP_008946603.1|	-	0.029	13.7	0.0	0.075	12.4	0.0	1.7	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
DUF2481	PF10654.4	gi|568163269|ref|YP_008946603.1|	-	0.043	13.5	0.0	0.19	11.3	0.0	2.1	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF2481)
INTS5_N	PF14837.1	gi|568163269|ref|YP_008946603.1|	-	0.065	12.6	0.0	0.1	11.9	0.0	1.3	1	0	0	1	1	1	0	Integrator	complex	subunit	5	N-terminus
HTH_5	PF01022.15	gi|568163269|ref|YP_008946603.1|	-	0.069	12.8	0.0	0.21	11.3	0.0	1.8	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
Sigma70_r4_2	PF08281.7	gi|568163269|ref|YP_008946603.1|	-	0.089	12.2	0.0	0.17	11.3	0.0	1.5	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_19	PF12844.2	gi|568163269|ref|YP_008946603.1|	-	0.094	12.7	0.5	0.24	11.4	0.1	2.0	2	1	0	2	2	2	0	Helix-turn-helix	domain
Peptidase_M50	PF02163.17	gi|568163271|ref|YP_008946606.1|	-	1.9e-12	46.5	10.0	1.9e-12	46.5	6.9	1.9	2	1	0	2	2	2	1	Peptidase	family	M50
DUF4492	PF14899.1	gi|568163271|ref|YP_008946606.1|	-	0.031	13.7	1.0	0.073	12.5	0.7	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4492)
Rhomboid	PF01694.17	gi|568163272|ref|YP_008946607.1|	-	7.9e-23	81.1	6.9	7.9e-23	81.1	4.8	1.7	2	0	0	2	2	2	1	Rhomboid	family
DUF4234	PF14018.1	gi|568163272|ref|YP_008946607.1|	-	0.038	13.7	5.7	0.023	14.4	1.9	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4234)
DUF1189	PF06691.6	gi|568163272|ref|YP_008946607.1|	-	0.065	12.5	0.5	0.065	12.5	0.3	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1189)
DUF3816	PF12822.2	gi|568163272|ref|YP_008946607.1|	-	0.96	9.3	18.8	22	4.9	13.0	2.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3816)
PAP2	PF01569.16	gi|568163272|ref|YP_008946607.1|	-	3.3	7.3	10.1	3.4	7.3	1.9	3.1	1	1	1	2	2	2	0	PAP2	superfamily
DUF4229	PF14012.1	gi|568163272|ref|YP_008946607.1|	-	3.8	7.4	7.2	0.42	10.5	0.9	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4229)
DUF2975	PF11188.3	gi|568163273|ref|YP_008946608.1|	-	0.038	13.6	1.1	0.039	13.6	0.8	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2975)
DUF1206	PF06724.6	gi|568163273|ref|YP_008946608.1|	-	0.043	13.5	0.8	0.14	11.9	0.0	1.9	2	0	0	2	2	2	0	Domain	of	Unknown	Function	(DUF1206)
Tetraspannin	PF00335.15	gi|568163273|ref|YP_008946608.1|	-	0.46	9.7	4.1	0.5	9.5	2.8	1.1	1	0	0	1	1	1	0	Tetraspanin	family
DUF3185	PF11381.3	gi|568163273|ref|YP_008946608.1|	-	2	8.2	5.4	3.4	7.4	0.3	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3185)
AAA_18	PF13238.1	gi|568163274|ref|YP_008946609.1|	-	3.3e-22	79.1	0.5	3.3e-22	79.1	0.4	1.6	2	0	0	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|568163274|ref|YP_008946609.1|	-	9.3e-15	55.5	0.5	2.2e-14	54.3	0.3	1.8	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|568163274|ref|YP_008946609.1|	-	1.8e-07	31.3	0.1	8.4e-07	29.2	0.0	1.9	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_5	PF07728.9	gi|568163274|ref|YP_008946609.1|	-	4.4e-07	29.6	0.0	8.7e-07	28.7	0.0	1.5	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
SKI	PF01202.17	gi|568163274|ref|YP_008946609.1|	-	8.9e-07	28.9	0.1	1.5e-06	28.1	0.1	1.5	1	1	0	1	1	1	1	Shikimate	kinase
AAA_33	PF13671.1	gi|568163274|ref|YP_008946609.1|	-	1.6e-06	28.0	0.0	1.4e-05	24.9	0.0	2.0	1	1	1	2	2	2	1	AAA	domain
KTI12	PF08433.5	gi|568163274|ref|YP_008946609.1|	-	4.7e-05	22.7	0.2	9.1e-05	21.7	0.0	1.8	1	1	0	1	1	1	1	Chromatin	associated	protein	KTI12
AAA_28	PF13521.1	gi|568163274|ref|YP_008946609.1|	-	5e-05	23.3	1.0	0.00013	21.9	0.4	1.9	1	1	1	2	2	2	1	AAA	domain
AAA_19	PF13245.1	gi|568163274|ref|YP_008946609.1|	-	0.00016	21.3	0.1	0.00068	19.3	0.1	1.9	2	0	0	2	2	2	1	Part	of	AAA	domain
DUF2075	PF09848.4	gi|568163274|ref|YP_008946609.1|	-	0.00028	20.0	0.0	0.00037	19.5	0.0	1.3	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_22	PF13401.1	gi|568163274|ref|YP_008946609.1|	-	0.00037	20.6	0.5	0.001	19.2	0.4	2.1	1	1	0	1	1	1	1	AAA	domain
Cytidylate_kin2	PF13189.1	gi|568163274|ref|YP_008946609.1|	-	0.00047	20.1	0.2	0.0033	17.3	0.0	2.0	1	1	1	2	2	2	1	Cytidylate	kinase-like	family
AAA_16	PF13191.1	gi|568163274|ref|YP_008946609.1|	-	0.00056	19.9	0.0	0.00084	19.3	0.0	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
T2SE	PF00437.15	gi|568163274|ref|YP_008946609.1|	-	0.00078	18.4	0.1	0.0012	17.7	0.1	1.4	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
APS_kinase	PF01583.15	gi|568163274|ref|YP_008946609.1|	-	0.0014	18.3	0.2	0.01	15.5	0.1	2.2	2	1	0	2	2	2	1	Adenylylsulphate	kinase
Zeta_toxin	PF06414.7	gi|568163274|ref|YP_008946609.1|	-	0.0015	17.6	0.3	0.0095	15.0	0.2	2.1	1	1	0	1	1	1	1	Zeta	toxin
NTPase_1	PF03266.10	gi|568163274|ref|YP_008946609.1|	-	0.0017	18.0	1.9	0.0033	17.1	0.1	2.2	2	1	0	2	2	2	1	NTPase
AAA_14	PF13173.1	gi|568163274|ref|YP_008946609.1|	-	0.0029	17.4	1.1	0.0047	16.8	0.1	1.8	2	0	0	2	2	2	1	AAA	domain
RuvB_N	PF05496.7	gi|568163274|ref|YP_008946609.1|	-	0.0036	16.3	0.0	0.0073	15.3	0.0	1.5	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
RNA_helicase	PF00910.17	gi|568163274|ref|YP_008946609.1|	-	0.0063	16.6	0.0	0.016	15.3	0.0	1.8	1	1	0	1	1	1	1	RNA	helicase
PRK	PF00485.13	gi|568163274|ref|YP_008946609.1|	-	0.0079	15.7	0.1	0.034	13.6	0.0	2.0	1	1	1	2	2	2	1	Phosphoribulokinase	/	Uridine	kinase	family
ADK	PF00406.17	gi|568163274|ref|YP_008946609.1|	-	0.0088	15.9	0.2	0.03	14.2	0.1	2.2	1	1	0	1	1	1	1	Adenylate	kinase
IstB_IS21	PF01695.12	gi|568163274|ref|YP_008946609.1|	-	0.011	15.1	0.3	0.11	11.8	0.1	2.2	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA_3	PF07726.6	gi|568163274|ref|YP_008946609.1|	-	0.015	14.9	0.0	0.034	13.7	0.0	1.6	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Thymidylate_kin	PF02223.12	gi|568163274|ref|YP_008946609.1|	-	0.02	14.2	1.0	0.41	10.0	0.0	2.4	1	1	0	2	2	2	0	Thymidylate	kinase
AAA_11	PF13086.1	gi|568163274|ref|YP_008946609.1|	-	0.027	14.0	0.0	0.032	13.8	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
ArgK	PF03308.11	gi|568163274|ref|YP_008946609.1|	-	0.028	13.2	1.1	0.064	12.0	0.1	1.8	2	0	0	2	2	2	0	ArgK	protein
MobB	PF03205.9	gi|568163274|ref|YP_008946609.1|	-	0.03	14.0	1.9	0.042	13.5	0.2	1.9	2	1	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_30	PF13604.1	gi|568163274|ref|YP_008946609.1|	-	0.032	13.7	0.1	0.076	12.5	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
cobW	PF02492.14	gi|568163274|ref|YP_008946609.1|	-	0.033	13.6	1.3	0.12	11.7	0.2	2.2	1	1	1	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
Viral_helicase1	PF01443.13	gi|568163274|ref|YP_008946609.1|	-	0.035	13.6	0.0	0.19	11.2	0.0	2.0	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
CPT	PF07931.7	gi|568163274|ref|YP_008946609.1|	-	0.037	13.6	0.0	0.051	13.2	0.0	1.4	1	0	0	1	1	1	0	Chloramphenicol	phosphotransferase-like	protein
ResIII	PF04851.10	gi|568163274|ref|YP_008946609.1|	-	0.05	13.4	0.5	0.079	12.7	0.4	1.7	1	1	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
DUF4375	PF14300.1	gi|568163274|ref|YP_008946609.1|	-	0.067	13.1	2.8	0.31	11.0	0.2	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4375)
AAA_24	PF13479.1	gi|568163274|ref|YP_008946609.1|	-	0.075	12.6	3.3	0.054	13.0	0.9	1.9	2	1	0	2	2	2	0	AAA	domain
NACHT	PF05729.7	gi|568163274|ref|YP_008946609.1|	-	0.084	12.5	0.1	0.19	11.3	0.0	1.6	1	0	0	1	1	1	0	NACHT	domain
Sigma54_activat	PF00158.21	gi|568163274|ref|YP_008946609.1|	-	0.12	11.7	0.0	0.73	9.2	0.0	2.0	2	0	0	2	2	2	0	Sigma-54	interaction	domain
KaiC	PF06745.8	gi|568163274|ref|YP_008946609.1|	-	0.85	8.6	3.9	0.34	10.0	0.3	2.0	2	1	0	2	2	2	0	KaiC
CbiA	PF01656.18	gi|568163274|ref|YP_008946609.1|	-	2.9	7.2	5.3	15	4.9	3.7	2.2	1	1	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ParA	PF10609.4	gi|568163275|ref|YP_008946610.1|	-	3.1e-31	107.0	0.1	1.3e-30	105.0	0.0	2.0	2	0	0	2	2	2	1	ParA/MinD	ATPase	like
CbiA	PF01656.18	gi|568163275|ref|YP_008946610.1|	-	7.7e-17	61.3	0.1	1.3e-16	60.6	0.0	1.3	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Fer4_NifH	PF00142.13	gi|568163275|ref|YP_008946610.1|	-	4.7e-10	39.1	0.2	7.3e-05	22.0	0.1	2.3	2	0	0	2	2	2	2	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
AAA_31	PF13614.1	gi|568163275|ref|YP_008946610.1|	-	3.8e-07	30.1	0.0	2.5e-06	27.5	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
ArsA_ATPase	PF02374.10	gi|568163275|ref|YP_008946610.1|	-	3.8e-06	26.1	0.4	4.3e-05	22.7	0.2	2.1	2	0	0	2	2	2	1	Anion-transporting	ATPase
MipZ	PF09140.6	gi|568163275|ref|YP_008946610.1|	-	9.8e-06	24.8	0.0	1.5e-05	24.2	0.0	1.3	1	0	0	1	1	1	1	ATPase	MipZ
AAA_10	PF12846.2	gi|568163275|ref|YP_008946610.1|	-	5.6e-05	22.7	0.1	6.6e-05	22.5	0.0	1.2	1	0	0	1	1	1	1	AAA-like	domain
ArgK	PF03308.11	gi|568163275|ref|YP_008946610.1|	-	0.00065	18.5	0.1	0.0011	17.7	0.1	1.3	1	0	0	1	1	1	1	ArgK	protein
AAA_25	PF13481.1	gi|568163275|ref|YP_008946610.1|	-	0.00074	18.9	0.0	0.0019	17.6	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
AAA_26	PF13500.1	gi|568163275|ref|YP_008946610.1|	-	0.0011	18.5	0.2	1.5	8.3	0.0	2.2	2	0	0	2	2	2	2	AAA	domain
IstB_IS21	PF01695.12	gi|568163275|ref|YP_008946610.1|	-	0.16	11.3	0.0	0.29	10.5	0.0	1.4	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
DUF4364	PF14277.1	gi|568163276|ref|YP_008946611.1|	-	0.0014	18.3	0.1	0.0015	18.1	0.1	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
HTH_12	PF08461.5	gi|568163276|ref|YP_008946611.1|	-	0.065	12.9	0.6	0.076	12.7	0.4	1.2	1	0	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
Arg_repressor	PF01316.16	gi|568163276|ref|YP_008946611.1|	-	0.41	10.2	2.0	0.55	9.8	1.1	1.6	1	1	0	1	1	1	0	Arginine	repressor,	DNA	binding	domain
Takusan	PF04822.8	gi|568163276|ref|YP_008946611.1|	-	0.83	9.4	3.5	11	5.8	0.1	2.2	1	1	1	2	2	2	0	Takusan
TrmB	PF01978.14	gi|568163277|ref|YP_008946612.1|	-	9.9e-13	47.6	0.2	1.4e-12	47.1	0.1	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|568163277|ref|YP_008946612.1|	-	5.7e-08	32.3	0.0	1e-07	31.5	0.0	1.4	1	0	0	1	1	1	1	MarR	family
TFIIE_alpha	PF02002.12	gi|568163277|ref|YP_008946612.1|	-	1.4e-06	27.7	0.9	1.8e-06	27.4	0.6	1.1	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HTH_5	PF01022.15	gi|568163277|ref|YP_008946612.1|	-	2.7e-06	26.9	0.7	4.9e-05	22.9	0.2	2.5	2	1	1	3	3	3	1	Bacterial	regulatory	protein,	arsR	family
MarR	PF01047.17	gi|568163277|ref|YP_008946612.1|	-	0.00023	20.7	0.1	0.00035	20.2	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.1	gi|568163277|ref|YP_008946612.1|	-	0.00027	20.2	0.1	0.00058	19.1	0.1	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
Rrf2	PF02082.15	gi|568163277|ref|YP_008946612.1|	-	0.00047	20.2	0.0	0.00083	19.4	0.0	1.4	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_34	PF13601.1	gi|568163277|ref|YP_008946612.1|	-	0.00052	20.0	0.2	0.00077	19.4	0.1	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
Fe_dep_repress	PF01325.14	gi|568163277|ref|YP_008946612.1|	-	0.00066	19.5	0.3	0.0015	18.4	0.1	1.8	2	1	0	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DUF2250	PF10007.4	gi|568163277|ref|YP_008946612.1|	-	0.0013	18.5	0.3	0.0023	17.8	0.1	1.5	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_27	PF13463.1	gi|568163277|ref|YP_008946612.1|	-	0.0015	18.7	0.1	0.0038	17.5	0.0	1.7	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
PadR	PF03551.9	gi|568163277|ref|YP_008946612.1|	-	0.0018	17.9	0.0	0.0037	17.0	0.0	1.6	1	1	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_20	PF12840.2	gi|568163277|ref|YP_008946612.1|	-	0.0037	17.0	0.0	0.0075	16.0	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
YugN	PF08868.5	gi|568163277|ref|YP_008946612.1|	-	0.014	15.0	0.0	0.017	14.7	0.0	1.1	1	0	0	1	1	1	0	YugN-like	family
DUF4423	PF14394.1	gi|568163277|ref|YP_008946612.1|	-	0.025	14.1	0.2	0.043	13.3	0.1	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
Replic_Relax	PF13814.1	gi|568163277|ref|YP_008946612.1|	-	0.029	14.2	0.0	0.032	14.0	0.0	1.2	1	0	0	1	1	1	0	Replication-relaxation
HTH_23	PF13384.1	gi|568163277|ref|YP_008946612.1|	-	0.03	13.9	0.0	0.17	11.5	0.0	2.0	2	0	0	2	2	2	0	Homeodomain-like	domain
GPP34	PF05719.6	gi|568163277|ref|YP_008946612.1|	-	0.05	13.6	0.0	0.053	13.5	0.0	1.1	1	0	0	1	1	1	0	Golgi	phosphoprotein	3	(GPP34)
DUF2680	PF10925.3	gi|568163277|ref|YP_008946612.1|	-	0.06	13.2	0.0	0.12	12.3	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2680)
RPA_C	PF08784.6	gi|568163277|ref|YP_008946612.1|	-	0.072	13.5	0.0	0.16	12.4	0.0	1.5	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
Cdc6_C	PF09079.6	gi|568163277|ref|YP_008946612.1|	-	0.12	12.0	0.3	0.3	10.8	0.0	1.8	2	0	0	2	2	2	0	CDC6,	C	terminal
HTH_45	PF14947.1	gi|568163277|ref|YP_008946612.1|	-	0.16	11.7	1.1	0.22	11.3	0.1	1.7	2	0	0	2	2	2	0	Winged	helix-turn-helix
5-FTHF_cyc-lig	PF01812.15	gi|568163278|ref|YP_008946613.1|	-	1.1e-30	106.7	0.0	1.3e-30	106.5	0.0	1.1	1	0	0	1	1	1	1	5-formyltetrahydrofolate	cyclo-ligase	family
YcaO	PF02624.11	gi|568163278|ref|YP_008946613.1|	-	0.029	13.8	0.0	0.051	13.0	0.0	1.3	1	0	0	1	1	1	0	YcaO-like	family
LysE	PF01810.13	gi|568163279|ref|YP_008946614.1|	-	1.9e-27	95.8	17.2	2.4e-27	95.4	11.9	1.1	1	0	0	1	1	1	1	LysE	type	translocator
RALF	PF05498.6	gi|568163279|ref|YP_008946614.1|	-	0.081	13.7	0.2	0.2	12.4	0.0	1.7	2	0	0	2	2	2	0	Rapid	ALkalinization	Factor	(RALF)
DUF1129	PF06570.6	gi|568163279|ref|YP_008946614.1|	-	3.8	6.7	10.1	0.068	12.4	1.6	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1129)
HTH_23	PF13384.1	gi|568163280|ref|YP_008946615.1|	-	2.2e-15	55.7	1.3	8.6e-05	22.0	0.2	3.2	3	0	0	3	3	3	3	Homeodomain-like	domain
HTH_38	PF13936.1	gi|568163280|ref|YP_008946615.1|	-	3.9e-15	55.1	3.9	3.6e-06	26.4	0.0	3.2	3	0	0	3	3	3	3	Helix-turn-helix	domain
HTH_7	PF02796.10	gi|568163280|ref|YP_008946615.1|	-	1.3e-14	53.7	7.9	0.00063	19.5	0.5	3.2	3	0	0	3	3	3	3	Helix-turn-helix	domain	of	resolvase
HTH_28	PF13518.1	gi|568163280|ref|YP_008946615.1|	-	4.9e-12	45.6	2.1	0.00062	19.7	0.1	3.2	3	0	0	3	3	3	2	Helix-turn-helix	domain
HTH_Tnp_ISL3	PF13542.1	gi|568163280|ref|YP_008946615.1|	-	6.2e-10	38.0	0.0	6.1e-05	22.1	0.0	2.9	3	0	0	3	3	3	2	Helix-turn-helix	domain	of	transposase	family	ISL3
GerE	PF00196.14	gi|568163280|ref|YP_008946615.1|	-	9.1e-10	37.7	1.8	0.00092	18.4	0.0	3.3	3	0	0	3	3	3	3	Bacterial	regulatory	proteins,	luxR	family
Sigma70_r4_2	PF08281.7	gi|568163280|ref|YP_008946615.1|	-	2.5e-09	36.4	1.2	0.0048	16.3	0.0	3.2	3	0	0	3	3	3	3	Sigma-70,	region	4
GcrA	PF07750.6	gi|568163280|ref|YP_008946615.1|	-	5.2e-08	33.2	0.6	0.0041	17.3	0.0	2.2	1	1	1	2	2	2	2	GcrA	cell	cycle	regulator
HTH_29	PF13551.1	gi|568163280|ref|YP_008946615.1|	-	7.3e-07	29.3	0.3	0.12	12.5	0.0	3.0	2	1	1	3	3	3	2	Winged	helix-turn	helix
Terminase_5	PF06056.7	gi|568163280|ref|YP_008946615.1|	-	1.1e-05	24.9	0.1	0.4	10.2	0.0	3.1	3	0	0	3	3	3	2	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_Tnp_IS1	PF12759.2	gi|568163280|ref|YP_008946615.1|	-	1.1e-05	24.6	0.3	0.048	13.0	0.0	2.9	3	0	0	3	3	3	2	InsA	C-terminal	domain
HTH_24	PF13412.1	gi|568163280|ref|YP_008946615.1|	-	1.5e-05	24.2	4.5	0.071	12.5	0.0	3.6	4	0	0	4	4	3	2	Winged	helix-turn-helix	DNA-binding
Sigma70_r4	PF04545.11	gi|568163280|ref|YP_008946615.1|	-	2e-05	23.7	0.7	0.029	13.6	0.0	3.1	3	0	0	3	3	3	1	Sigma-70,	region	4
CENP-B_N	PF04218.8	gi|568163280|ref|YP_008946615.1|	-	3.6e-05	23.1	1.9	0.0079	15.5	0.1	2.5	2	0	0	2	2	2	1	CENP-B	N-terminal	DNA-binding	domain
HTH_10	PF04967.7	gi|568163280|ref|YP_008946615.1|	-	3.9e-05	23.1	1.3	0.073	12.6	0.0	3.3	3	0	0	3	3	3	1	HTH	DNA	binding	domain
TrmB	PF01978.14	gi|568163280|ref|YP_008946615.1|	-	5.9e-05	22.6	1.5	0.099	12.3	0.0	3.1	3	0	0	3	3	3	1	Sugar-specific	transcriptional	regulator	TrmB
DUF3791	PF12668.2	gi|568163280|ref|YP_008946615.1|	-	9.7e-05	21.9	1.4	1.5	8.5	0.0	3.7	2	1	2	4	4	4	1	Protein	of	unknown	function	(DUF3791)
HTH_Tnp_IS630	PF01710.11	gi|568163280|ref|YP_008946615.1|	-	0.00024	20.7	2.7	0.011	15.4	0.6	2.2	1	1	1	2	2	2	1	Transposase
HTH_40	PF14493.1	gi|568163280|ref|YP_008946615.1|	-	0.00029	21.0	1.5	0.35	11.1	0.4	3.2	1	1	1	2	2	2	1	Helix-turn-helix	domain
CPSase_L_D3	PF02787.14	gi|568163280|ref|YP_008946615.1|	-	0.00047	19.9	2.0	0.88	9.3	0.2	2.8	1	1	2	3	3	3	3	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
Recombinase	PF07508.8	gi|568163280|ref|YP_008946615.1|	-	0.00058	20.0	1.4	1.9	8.7	0.0	3.1	3	0	0	3	3	3	1	Recombinase
Phage_antitermQ	PF06530.7	gi|568163280|ref|YP_008946615.1|	-	0.00083	18.9	3.7	0.064	12.8	0.1	2.8	1	1	2	3	3	3	1	Phage	antitermination	protein	Q
HTH_3	PF01381.17	gi|568163280|ref|YP_008946615.1|	-	0.001	18.8	3.2	0.38	10.6	0.2	3.3	2	1	1	3	3	3	1	Helix-turn-helix
KorB	PF08535.5	gi|568163280|ref|YP_008946615.1|	-	0.0046	17.0	0.3	0.88	9.7	0.0	3.0	2	1	0	3	3	3	1	KorB	domain
IF2_N	PF04760.10	gi|568163280|ref|YP_008946615.1|	-	0.005	16.4	4.9	1.5	8.5	0.0	3.7	2	2	1	3	3	3	1	Translation	initiation	factor	IF-2,	N-terminal	region
PAX	PF00292.13	gi|568163280|ref|YP_008946615.1|	-	0.0054	16.4	0.2	0.033	13.8	0.1	2.1	1	1	1	2	2	2	1	'Paired	box'	domain
Mga	PF05043.8	gi|568163280|ref|YP_008946615.1|	-	0.0054	16.9	2.4	1.7	9.0	0.0	2.9	2	1	1	3	3	3	1	Mga	helix-turn-helix	domain
Death	PF00531.17	gi|568163280|ref|YP_008946615.1|	-	0.0054	16.4	0.1	0.35	10.6	0.0	2.6	1	1	0	2	2	2	1	Death	domain
HTH_Tnp_1	PF01527.15	gi|568163280|ref|YP_008946615.1|	-	0.01	15.7	0.0	0.69	9.9	0.0	2.8	3	0	0	3	3	3	0	Transposase
TGT	PF01702.13	gi|568163280|ref|YP_008946615.1|	-	0.017	14.4	0.0	0.02	14.1	0.0	1.2	1	0	0	1	1	1	0	Queuine	tRNA-ribosyltransferase
HTH_5	PF01022.15	gi|568163280|ref|YP_008946615.1|	-	0.019	14.6	0.3	10	5.8	0.0	3.5	3	1	0	3	3	3	0	Bacterial	regulatory	protein,	arsR	family
DUF2089	PF09862.4	gi|568163280|ref|YP_008946615.1|	-	0.021	14.6	2.2	0.047	13.4	0.4	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2089)
HTH_AsnC-type	PF13404.1	gi|568163280|ref|YP_008946615.1|	-	0.028	13.9	0.0	1.3	8.6	0.0	2.9	3	0	0	3	3	3	0	AsnC-type	helix-turn-helix	domain
Ribosomal_S13	PF00416.17	gi|568163280|ref|YP_008946615.1|	-	0.029	14.8	4.6	0.67	10.4	0.6	2.1	1	1	1	2	2	2	0	Ribosomal	protein	S13/S18
HTH_11	PF08279.7	gi|568163280|ref|YP_008946615.1|	-	0.03	13.9	4.3	6.9	6.4	0.1	3.5	3	1	1	4	4	3	0	HTH	domain
NUMOD1	PF07453.8	gi|568163280|ref|YP_008946615.1|	-	0.036	13.9	2.7	0.38	10.6	0.0	2.9	3	0	0	3	3	3	0	NUMOD1	domain
Sigma70_ECF	PF07638.6	gi|568163280|ref|YP_008946615.1|	-	0.056	13.1	0.3	1	8.9	0.1	2.4	1	1	1	2	2	2	0	ECF	sigma	factor
MarR_2	PF12802.2	gi|568163280|ref|YP_008946615.1|	-	0.066	12.8	0.1	11	5.7	0.0	2.8	3	1	0	3	3	3	0	MarR	family
HTH_36	PF13730.1	gi|568163280|ref|YP_008946615.1|	-	0.076	13.1	2.4	5.3	7.2	0.0	3.2	3	1	0	3	3	3	0	Helix-turn-helix	domain
ANT	PF03374.9	gi|568163280|ref|YP_008946615.1|	-	0.084	12.9	0.6	3	7.9	0.0	2.5	2	1	1	3	3	3	0	Phage	antirepressor	protein	KilAC	domain
Multi-haem_cyto	PF13447.1	gi|568163280|ref|YP_008946615.1|	-	0.09	11.8	0.1	0.11	11.4	0.0	1.1	1	0	0	1	1	1	0	Seven	times	multi-haem	cytochrome	CxxCH
DUF3102	PF11300.3	gi|568163280|ref|YP_008946615.1|	-	0.11	12.4	0.5	0.14	12.1	0.3	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3102)
AF0941-like	PF14591.1	gi|568163280|ref|YP_008946615.1|	-	0.14	12.1	3.0	0.73	9.9	0.2	2.1	1	1	1	2	2	2	0	AF0941-like
Trp_repressor	PF01371.14	gi|568163280|ref|YP_008946615.1|	-	0.16	11.8	1.3	13	5.7	0.0	2.8	1	1	2	3	3	3	0	Trp	repressor	protein
HTH_22	PF13309.1	gi|568163280|ref|YP_008946615.1|	-	0.3	10.8	2.7	23	4.8	0.1	3.5	2	1	1	3	3	3	0	HTH	domain
HTH_26	PF13443.1	gi|568163280|ref|YP_008946615.1|	-	0.3	11.3	2.7	5.2	7.3	0.1	2.9	2	1	0	2	2	2	0	Cro/C1-type	HTH	DNA-binding	domain
tRNA-synt_1b	PF00579.20	gi|568163281|ref|YP_008946616.1|	-	2.4e-25	89.2	0.0	3.7e-25	88.6	0.0	1.3	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(W	and	Y)
Snf7	PF03357.16	gi|568163282|ref|YP_008946617.1|	-	0.00094	18.6	1.1	0.0015	17.9	0.8	1.4	1	0	0	1	1	1	1	Snf7
LOH1CR12	PF10158.4	gi|568163282|ref|YP_008946617.1|	-	0.0018	18.0	0.8	0.0041	16.9	0.4	1.7	1	1	0	1	1	1	1	Tumour	suppressor	protein
Pox_F11	PF04943.7	gi|568163282|ref|YP_008946617.1|	-	0.017	13.9	0.1	0.02	13.7	0.1	1.2	1	0	0	1	1	1	0	Poxvirus	F11	protein
DUF3958	PF13125.1	gi|568163282|ref|YP_008946617.1|	-	0.073	12.9	0.1	0.14	12.0	0.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3958)
tRNA-synt_2c	PF01411.14	gi|568163283|ref|YP_008946618.1|	-	9.9e-15	53.8	0.3	1.4e-14	53.3	0.2	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(A)
tRNA_SAD	PF07973.9	gi|568163283|ref|YP_008946618.1|	-	6.2e-14	51.6	0.7	1.4e-13	50.5	0.5	1.6	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
GtrA	PF04138.9	gi|568163284|ref|YP_008946619.1|	-	9.1e-19	67.5	11.9	1.3e-18	67.0	8.2	1.2	1	0	0	1	1	1	1	GtrA-like	protein
Keratin_assoc	PF09775.4	gi|568163284|ref|YP_008946619.1|	-	1.6	8.2	6.0	0.6	9.6	2.1	1.8	1	1	1	2	2	2	0	Keratinocyte-associated	protein	2
Aminotran_1_2	PF00155.16	gi|568163285|ref|YP_008946620.1|	-	4.7e-11	42.2	0.0	1.4e-09	37.4	0.0	2.1	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
HTH_10	PF04967.7	gi|568163286|ref|YP_008946621.1|	-	2.3e-20	71.8	0.1	3.9e-20	71.1	0.1	1.4	1	0	0	1	1	1	1	HTH	DNA	binding	domain
HTH_24	PF13412.1	gi|568163286|ref|YP_008946621.1|	-	6.7e-06	25.3	1.0	0.0023	17.2	0.2	2.9	3	0	0	3	3	3	2	Winged	helix-turn-helix	DNA-binding
HTH_28	PF13518.1	gi|568163286|ref|YP_008946621.1|	-	0.012	15.6	0.2	0.023	14.7	0.1	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
MarR_2	PF12802.2	gi|568163286|ref|YP_008946621.1|	-	0.015	14.9	0.0	0.12	12.1	0.0	2.1	2	0	0	2	2	2	0	MarR	family
ENT	PF03735.9	gi|568163286|ref|YP_008946621.1|	-	0.017	14.8	1.2	0.15	11.7	0.9	2.4	1	1	0	1	1	1	0	ENT	domain
Mga	PF05043.8	gi|568163286|ref|YP_008946621.1|	-	0.033	14.4	0.6	0.2	11.9	0.4	2.1	1	1	0	1	1	1	0	Mga	helix-turn-helix	domain
HTH_3	PF01381.17	gi|568163286|ref|YP_008946621.1|	-	0.045	13.6	0.1	0.14	12.0	0.0	1.8	1	0	0	1	1	1	0	Helix-turn-helix
HTH_Mga	PF08280.6	gi|568163286|ref|YP_008946621.1|	-	0.065	12.9	0.0	0.2	11.4	0.0	1.8	1	0	0	1	1	1	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_AsnC-type	PF13404.1	gi|568163286|ref|YP_008946621.1|	-	0.082	12.4	0.3	3.1	7.4	0.3	2.5	2	0	0	2	2	2	0	AsnC-type	helix-turn-helix	domain
MarR	PF01047.17	gi|568163286|ref|YP_008946621.1|	-	0.11	12.2	0.1	0.27	10.9	0.1	1.7	1	0	0	1	1	1	0	MarR	family
HTH_11	PF08279.7	gi|568163286|ref|YP_008946621.1|	-	0.17	11.5	1.5	0.91	9.2	0.4	2.5	1	1	1	2	2	2	0	HTH	domain
Fer4	PF00037.22	gi|568163287|ref|YP_008946622.1|	-	4.1e-14	51.5	13.6	3.5e-07	29.5	4.1	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|568163287|ref|YP_008946622.1|	-	1.7e-11	44.2	6.9	2.2e-11	43.8	4.8	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|568163287|ref|YP_008946622.1|	-	4.4e-10	38.9	13.8	4.1e-06	26.4	3.8	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|568163287|ref|YP_008946622.1|	-	1.9e-09	37.7	6.7	2.8e-09	37.2	4.6	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|568163287|ref|YP_008946622.1|	-	3.4e-09	36.3	18.3	3.4e-07	29.9	5.2	1.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|568163287|ref|YP_008946622.1|	-	1.6e-08	34.3	5.5	2e-08	33.9	3.8	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|568163287|ref|YP_008946622.1|	-	1.1e-07	31.7	10.4	6.8e-06	26.0	4.8	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|568163287|ref|YP_008946622.1|	-	1.1e-06	28.2	11.7	0.0036	17.1	0.7	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|568163287|ref|YP_008946622.1|	-	6.3e-06	26.0	8.3	0.017	15.3	2.3	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|568163287|ref|YP_008946622.1|	-	1e-05	25.7	14.6	0.0077	16.7	4.6	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|568163287|ref|YP_008946622.1|	-	1.6e-05	25.1	0.6	0.2	12.0	0.0	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|568163287|ref|YP_008946622.1|	-	3.6e-05	24.2	9.6	0.037	14.6	0.1	2.4	2	1	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.1	gi|568163287|ref|YP_008946622.1|	-	6.7e-05	23.1	9.2	0.047	14.0	0.2	2.3	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_16	PF13484.1	gi|568163287|ref|YP_008946622.1|	-	0.00041	21.0	8.3	0.0068	17.1	1.6	2.2	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_18	PF13746.1	gi|568163287|ref|YP_008946622.1|	-	0.0017	18.7	11.2	0.0082	16.5	2.1	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
DUF2761	PF10959.3	gi|568163287|ref|YP_008946622.1|	-	0.025	14.1	0.0	0.036	13.6	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2761)
DFP	PF04127.10	gi|568163288|ref|YP_008946623.1|	-	6e-58	195.5	0.3	3.1e-56	189.9	0.0	2.4	2	1	0	2	2	2	2	DNA	/	pantothenate	metabolism	flavoprotein
Flavoprotein	PF02441.14	gi|568163288|ref|YP_008946623.1|	-	1.3e-31	108.9	0.3	3.6e-31	107.5	0.2	1.8	1	0	0	1	1	1	1	Flavoprotein
ATP-synt_F	PF01990.12	gi|568163288|ref|YP_008946623.1|	-	0.058	13.7	2.0	0.82	10.1	0.0	3.1	3	2	1	4	4	4	0	ATP	synthase	(F/14-kDa)	subunit
Acetyltransf_1	PF00583.19	gi|568163289|ref|YP_008946624.1|	-	2e-16	59.7	0.0	3e-16	59.2	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|568163289|ref|YP_008946624.1|	-	1.1e-07	31.9	0.0	1.9e-07	31.1	0.0	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|568163289|ref|YP_008946624.1|	-	2.2e-07	30.9	0.1	4e-07	30.0	0.1	1.5	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|568163289|ref|YP_008946624.1|	-	1.8e-06	28.0	0.0	2.5e-06	27.5	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.1	gi|568163289|ref|YP_008946624.1|	-	2.3e-06	27.5	0.0	3.4e-06	27.0	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|568163289|ref|YP_008946624.1|	-	4.5e-06	26.3	0.0	6.8e-06	25.7	0.0	1.3	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_9	PF13527.1	gi|568163289|ref|YP_008946624.1|	-	7.9e-05	22.5	0.0	0.00035	20.4	0.0	1.9	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.1	gi|568163289|ref|YP_008946624.1|	-	0.0014	18.8	0.0	0.0018	18.4	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Metallophos_2	PF12850.2	gi|568163290|ref|YP_008946625.1|	-	6.4e-06	26.0	0.0	8e-06	25.7	0.0	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos_3	PF14582.1	gi|568163290|ref|YP_008946625.1|	-	8e-05	21.9	0.0	0.00094	18.4	0.0	2.0	1	1	1	2	2	2	2	Metallophosphoesterase,	calcineurin	superfamily
CitG	PF01874.11	gi|568163291|ref|YP_008946626.1|	-	5.4e-38	130.7	0.0	6.1e-38	130.5	0.0	1.0	1	0	0	1	1	1	1	ATP:dephospho-CoA	triphosphoribosyl	transferase
NTP_transf_2	PF01909.18	gi|568163292|ref|YP_008946627.1|	-	7.7e-09	35.7	0.6	2.2e-08	34.3	0.4	1.8	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
DUF1464	PF07318.7	gi|568163293|ref|YP_008946628.1|	-	1.9e-102	342.6	0.1	3.4e-102	341.7	0.0	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1464)
PIN	PF01850.16	gi|568164774|ref|YP_008946631.1|	-	2.2e-13	50.5	1.8	3.8e-13	49.8	1.3	1.4	1	1	0	1	1	1	1	PIN	domain
Ribosomal_L18ae	PF01775.12	gi|568164774|ref|YP_008946631.1|	-	0.058	13.2	0.1	0.1	12.4	0.1	1.5	1	1	0	1	1	1	0	Ribosomal	L18ae/LX	protein	domain
Ribosomal_S6	PF01250.12	gi|568164774|ref|YP_008946631.1|	-	0.094	12.5	0.4	0.14	12.0	0.2	1.3	1	0	0	1	1	1	0	Ribosomal	protein	S6
YolD	PF08863.5	gi|568164774|ref|YP_008946631.1|	-	0.41	10.5	2.8	2.3	8.1	0.1	2.2	2	0	0	2	2	2	0	YolD-like	protein
DUF217	PF02697.9	gi|568163294|ref|YP_008946632.1|	-	6.2e-28	96.8	1.5	7e-28	96.6	1.1	1.0	1	0	0	1	1	1	1	Uncharacterized	ACR,	COG1753
DegV	PF02645.11	gi|568163294|ref|YP_008946632.1|	-	0.0074	15.4	0.1	0.0079	15.3	0.1	1.0	1	0	0	1	1	1	1	Uncharacterised	protein,	DegV	family	COG1307
DUF3387	PF11867.3	gi|568163294|ref|YP_008946632.1|	-	0.022	13.7	0.5	0.025	13.5	0.3	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3387)
Pyrophosphatase	PF00719.14	gi|568163294|ref|YP_008946632.1|	-	0.12	11.8	0.1	0.13	11.7	0.1	1.0	1	0	0	1	1	1	0	Inorganic	pyrophosphatase
Arch_ATPase	PF01637.13	gi|568163295|ref|YP_008946634.1|	-	2.1e-33	116.0	2.2	2.1e-33	116.0	1.5	2.4	2	1	0	2	2	2	1	Archaeal	ATPase
DUF234	PF03008.9	gi|568163295|ref|YP_008946634.1|	-	2.4e-21	75.6	1.7	2.4e-21	75.6	1.1	2.3	3	0	0	3	3	2	1	Archaea	bacterial	proteins	of	unknown	function
AAA_14	PF13173.1	gi|568163295|ref|YP_008946634.1|	-	1.4e-10	41.1	0.7	7.7e-10	38.7	0.2	2.3	2	0	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|568163295|ref|YP_008946634.1|	-	5.8e-06	26.4	0.1	1.5e-05	25.1	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|568163295|ref|YP_008946634.1|	-	8.6e-06	25.8	0.0	0.0041	17.1	0.0	2.4	1	1	1	2	2	2	2	AAA	ATPase	domain
HTH_24	PF13412.1	gi|568163295|ref|YP_008946634.1|	-	1e-05	24.7	1.2	8.1e-05	21.9	0.1	2.9	3	0	0	3	3	3	1	Winged	helix-turn-helix	DNA-binding
HTH_45	PF14947.1	gi|568163295|ref|YP_008946634.1|	-	7.8e-05	22.4	1.0	0.0008	19.1	0.0	3.0	3	1	1	4	4	4	1	Winged	helix-turn-helix
MarR	PF01047.17	gi|568163295|ref|YP_008946634.1|	-	9.8e-05	21.9	0.0	0.00024	20.7	0.0	1.6	1	0	0	1	1	1	1	MarR	family
HTH_5	PF01022.15	gi|568163295|ref|YP_008946634.1|	-	0.00012	21.6	0.2	0.00032	20.3	0.0	1.8	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
TrmB	PF01978.14	gi|568163295|ref|YP_008946634.1|	-	0.00081	19.0	0.2	0.0024	17.5	0.1	1.7	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|568163295|ref|YP_008946634.1|	-	0.0015	18.1	0.0	0.0033	17.0	0.0	1.5	1	0	0	1	1	1	1	MarR	family
AAA	PF00004.24	gi|568163295|ref|YP_008946634.1|	-	0.0026	17.9	0.0	0.0052	16.9	0.0	1.5	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sulfolobus_pRN	PF05584.6	gi|568163295|ref|YP_008946634.1|	-	0.022	14.7	0.2	0.068	13.1	0.0	1.9	2	0	0	2	2	1	0	Sulfolobus	plasmid	regulatory	protein
HTH_IclR	PF09339.5	gi|568163295|ref|YP_008946634.1|	-	0.064	12.8	0.0	0.12	11.9	0.0	1.4	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_34	PF13601.1	gi|568163295|ref|YP_008946634.1|	-	0.071	13.1	0.1	0.29	11.2	0.0	2.0	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
DUF4143	PF13635.1	gi|568163295|ref|YP_008946634.1|	-	0.082	13.0	0.3	0.25	11.5	0.2	1.9	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4143)
IF-2B	PF01008.12	gi|568163296|ref|YP_008946637.1|	-	1.6e-74	250.4	0.1	1.9e-74	250.1	0.1	1.1	1	0	0	1	1	1	1	Initiation	factor	2	subunit	family
DUF4342	PF14242.1	gi|568163296|ref|YP_008946637.1|	-	0.0092	15.7	0.8	1.2	8.9	0.0	2.6	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF4342)
DHH	PF01368.15	gi|568163297|ref|YP_008946638.1|	-	1.1e-07	31.6	0.1	1.7e-07	30.9	0.0	1.3	1	0	0	1	1	1	1	DHH	family
DHHA1	PF02272.14	gi|568163297|ref|YP_008946638.1|	-	3.7e-07	29.7	0.1	1e-06	28.3	0.1	1.7	1	0	0	1	1	1	1	DHHA1	domain
CPSase_sm_chain	PF00988.17	gi|568163297|ref|YP_008946638.1|	-	0.1	12.1	0.1	0.41	10.1	0.0	1.9	1	1	1	2	2	2	0	Carbamoyl-phosphate	synthase	small	chain,	CPSase	domain
Isochorismatase	PF00857.15	gi|568163298|ref|YP_008946639.1|	-	3.2e-39	134.6	0.0	3.8e-39	134.3	0.0	1.0	1	0	0	1	1	1	1	Isochorismatase	family
Endonuclease_5	PF04493.9	gi|568163299|ref|YP_008946640.1|	-	1.9e-41	141.6	0.6	2.3e-41	141.4	0.4	1.1	1	0	0	1	1	1	1	Endonuclease	V
Y_phosphatase	PF00102.22	gi|568163300|ref|YP_008946641.1|	-	7.9e-11	41.7	0.0	9.2e-11	41.5	0.0	1.1	1	0	0	1	1	1	1	Protein-tyrosine	phosphatase
DSPc	PF00782.15	gi|568163300|ref|YP_008946641.1|	-	4.9e-10	39.0	0.0	7.2e-10	38.5	0.0	1.3	1	0	0	1	1	1	1	Dual	specificity	phosphatase,	catalytic	domain
PTPlike_phytase	PF14566.1	gi|568163300|ref|YP_008946641.1|	-	0.00087	19.3	0.0	0.0017	18.3	0.0	1.6	1	1	0	1	1	1	1	Inositol	hexakisphosphate
CDKN3	PF05706.7	gi|568163300|ref|YP_008946641.1|	-	0.001	18.5	0.0	0.0013	18.2	0.0	1.2	1	0	0	1	1	1	1	Cyclin-dependent	kinase	inhibitor	3	(CDKN3)
Y_phosphatase3	PF13350.1	gi|568163300|ref|YP_008946641.1|	-	0.01	16.0	0.0	0.013	15.7	0.0	1.2	1	0	0	1	1	1	0	Tyrosine	phosphatase	family
KaiC	PF06745.8	gi|568163301|ref|YP_008946642.1|	-	3.2e-57	193.2	0.2	3.7e-57	193.0	0.1	1.1	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.1	gi|568163301|ref|YP_008946642.1|	-	1.2e-12	47.6	0.0	1.7e-12	47.1	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
GvpD	PF07088.6	gi|568163301|ref|YP_008946642.1|	-	1.1e-07	30.5	0.1	3e-07	29.1	0.1	1.7	1	1	0	1	1	1	1	GvpD	gas	vesicle	protein
RecA	PF00154.16	gi|568163301|ref|YP_008946642.1|	-	4.2e-07	29.3	0.0	7.6e-07	28.4	0.0	1.4	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
Rad51	PF08423.6	gi|568163301|ref|YP_008946642.1|	-	3.1e-06	26.3	0.0	6.1e-06	25.3	0.0	1.4	1	1	0	1	1	1	1	Rad51
IstB_IS21	PF01695.12	gi|568163301|ref|YP_008946642.1|	-	0.00014	21.3	0.0	0.0003	20.2	0.0	1.6	1	1	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_19	PF13245.1	gi|568163301|ref|YP_008946642.1|	-	0.0002	21.0	0.0	0.00049	19.8	0.0	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_22	PF13401.1	gi|568163301|ref|YP_008946642.1|	-	0.00024	21.2	0.0	0.00053	20.1	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
DnaB_C	PF03796.10	gi|568163301|ref|YP_008946642.1|	-	0.00061	18.7	0.0	0.0012	17.8	0.0	1.5	1	0	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
AAA_14	PF13173.1	gi|568163301|ref|YP_008946642.1|	-	0.00067	19.5	0.1	0.015	15.1	0.0	2.3	1	1	0	1	1	1	1	AAA	domain
AAA_35	PF14516.1	gi|568163301|ref|YP_008946642.1|	-	0.0022	16.6	0.0	0.0029	16.2	0.0	1.1	1	0	0	1	1	1	1	AAA-like	domain
MEDS	PF14417.1	gi|568163301|ref|YP_008946642.1|	-	0.017	14.2	0.0	0.026	13.5	0.0	1.3	1	0	0	1	1	1	0	MEDS:	MEthanogen/methylotroph,	DcmR	Sensory	domain
PAXNEB	PF05625.6	gi|568163301|ref|YP_008946642.1|	-	0.019	13.8	0.1	0.037	12.8	0.1	1.4	1	1	0	1	1	1	0	PAXNEB	protein
DUF2075	PF09848.4	gi|568163301|ref|YP_008946642.1|	-	0.02	13.8	0.0	0.03	13.3	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_28	PF13521.1	gi|568163301|ref|YP_008946642.1|	-	0.044	13.7	0.0	0.078	12.9	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
DEAD	PF00270.24	gi|568163301|ref|YP_008946642.1|	-	0.045	13.2	0.0	0.068	12.6	0.0	1.3	1	0	0	1	1	1	0	DEAD/DEAH	box	helicase
AAA_10	PF12846.2	gi|568163301|ref|YP_008946642.1|	-	0.074	12.4	0.0	0.092	12.1	0.0	1.3	1	0	0	1	1	1	0	AAA-like	domain
AAA	PF00004.24	gi|568163301|ref|YP_008946642.1|	-	0.09	12.9	0.2	0.26	11.4	0.1	1.9	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
RNA_helicase	PF00910.17	gi|568163301|ref|YP_008946642.1|	-	0.09	12.9	0.0	0.42	10.8	0.0	2.0	2	1	0	2	2	2	0	RNA	helicase
NACHT	PF05729.7	gi|568163301|ref|YP_008946642.1|	-	0.095	12.3	0.6	0.32	10.6	0.4	2.1	1	1	0	1	1	1	0	NACHT	domain
NTPase_1	PF03266.10	gi|568163301|ref|YP_008946642.1|	-	0.11	12.1	0.3	0.24	11.0	0.1	1.9	2	1	0	2	2	2	0	NTPase
Sigma54_activ_2	PF14532.1	gi|568163301|ref|YP_008946642.1|	-	0.11	12.4	0.0	0.21	11.6	0.0	1.4	1	0	0	1	1	1	0	Sigma-54	interaction	domain
Sigma54_activat	PF00158.21	gi|568163301|ref|YP_008946642.1|	-	0.12	11.8	0.0	0.22	11.0	0.0	1.3	1	0	0	1	1	1	0	Sigma-54	interaction	domain
AAA_24	PF13479.1	gi|568163301|ref|YP_008946642.1|	-	0.12	11.9	0.7	0.44	10.1	0.1	2.2	3	1	0	3	3	3	0	AAA	domain
AAA_17	PF13207.1	gi|568163301|ref|YP_008946642.1|	-	0.23	12.2	2.3	1.2	10.0	1.6	2.3	1	1	0	1	1	1	0	AAA	domain
QRPTase_C	PF01729.14	gi|568163302|ref|YP_008946643.1|	-	1.8e-66	222.8	0.4	2.2e-66	222.5	0.3	1.1	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
QRPTase_N	PF02749.11	gi|568163302|ref|YP_008946643.1|	-	2.3e-17	62.5	0.0	6.8e-17	61.0	0.0	1.8	2	0	0	2	2	2	1	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
NanE	PF04131.9	gi|568163302|ref|YP_008946643.1|	-	0.017	14.1	0.3	0.044	12.7	0.2	1.6	1	1	0	1	1	1	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
Methyltransf_31	PF13847.1	gi|568163302|ref|YP_008946643.1|	-	0.023	14.2	0.1	0.055	13.0	0.1	1.7	2	0	0	2	2	2	0	Methyltransferase	domain
PcrB	PF01884.12	gi|568163302|ref|YP_008946643.1|	-	0.026	13.7	0.7	0.13	11.5	0.0	2.1	1	1	1	2	2	2	0	PcrB	family
Methyltransf_30	PF05430.6	gi|568163302|ref|YP_008946643.1|	-	0.031	13.9	0.0	0.063	12.9	0.0	1.5	1	0	0	1	1	1	0	S-adenosyl-L-methionine-dependent	methyltransferase
TMP-TENI	PF02581.12	gi|568163302|ref|YP_008946643.1|	-	0.059	12.4	0.1	0.72	8.9	0.0	2.2	1	1	0	1	1	1	0	Thiamine	monophosphate	synthase/TENI
Pterin_bind	PF00809.17	gi|568163302|ref|YP_008946643.1|	-	0.071	12.4	0.6	1.4	8.2	0.1	2.1	2	0	0	2	2	2	0	Pterin	binding	enzyme
RVT_thumb	PF06817.9	gi|568163302|ref|YP_008946643.1|	-	0.099	12.2	0.0	0.21	11.1	0.0	1.5	1	0	0	1	1	1	0	Reverse	transcriptase	thumb	domain
GATase	PF00117.23	gi|568163303|ref|YP_008946644.1|	-	1.8e-35	122.1	0.0	2e-35	121.9	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|568163303|ref|YP_008946644.1|	-	1.3e-10	41.0	0.0	5.6e-10	39.0	0.0	1.9	2	0	0	2	2	2	1	Peptidase	C26
SNO	PF01174.14	gi|568163303|ref|YP_008946644.1|	-	7.7e-06	25.6	0.1	0.032	13.8	0.0	2.1	2	0	0	2	2	2	2	SNO	glutamine	amidotransferase	family
FAD_binding_2	PF00890.19	gi|568163304|ref|YP_008946645.1|	-	3.5e-74	250.1	0.0	4.3e-74	249.8	0.0	1.1	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox_2	PF07992.9	gi|568163304|ref|YP_008946645.1|	-	1.9e-11	44.2	0.9	5.4e-07	29.6	0.3	3.1	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|568163304|ref|YP_008946645.1|	-	1.5e-10	40.5	0.0	4.4e-05	22.5	0.1	2.9	3	0	0	3	3	3	2	FAD	dependent	oxidoreductase
Succ_DH_flav_C	PF02910.15	gi|568163304|ref|YP_008946645.1|	-	1.1e-08	34.9	0.0	1.2e-05	25.1	0.0	2.4	1	1	1	2	2	2	2	Fumarate	reductase	flavoprotein	C-term
GIDA	PF01134.17	gi|568163304|ref|YP_008946645.1|	-	2.3e-06	26.7	0.3	0.032	13.0	0.0	2.2	2	0	0	2	2	2	2	Glucose	inhibited	division	protein	A
HI0933_like	PF03486.9	gi|568163304|ref|YP_008946645.1|	-	0.0011	17.5	1.0	0.016	13.6	0.1	2.7	2	1	0	2	2	2	1	HI0933-like	protein
NAD_binding_8	PF13450.1	gi|568163304|ref|YP_008946645.1|	-	0.0033	17.4	0.6	0.0088	16.0	0.4	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Imm43	PF15602.1	gi|568163304|ref|YP_008946645.1|	-	0.019	14.8	0.0	0.037	13.9	0.0	1.4	1	0	0	1	1	1	0	Immunity	protein	43
ApbA	PF02558.11	gi|568163304|ref|YP_008946645.1|	-	0.037	13.4	0.1	0.073	12.5	0.1	1.5	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
FAD_binding_3	PF01494.14	gi|568163304|ref|YP_008946645.1|	-	0.052	12.5	0.7	0.085	11.8	0.5	1.3	1	0	0	1	1	1	0	FAD	binding	domain
Thi4	PF01946.12	gi|568163304|ref|YP_008946645.1|	-	0.071	12.1	0.2	0.14	11.2	0.2	1.5	1	0	0	1	1	1	0	Thi4	family
Pyr_redox	PF00070.22	gi|568163304|ref|YP_008946645.1|	-	0.085	13.2	0.4	0.35	11.2	0.1	2.2	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
NUDIX	PF00293.23	gi|568163305|ref|YP_008946646.1|	-	3.9e-17	62.1	0.0	5.1e-17	61.7	0.0	1.1	1	0	0	1	1	1	1	NUDIX	domain
NUDIX_4	PF14815.1	gi|568163305|ref|YP_008946646.1|	-	0.025	13.9	0.0	0.066	12.6	0.0	1.6	2	0	0	2	2	2	0	NUDIX	domain
TIP49	PF06068.8	gi|568163306|ref|YP_008946647.1|	-	3.8e-156	519.8	7.6	4.5e-156	519.5	5.3	1.0	1	0	0	1	1	1	1	TIP49	C-terminus
AAA	PF00004.24	gi|568163306|ref|YP_008946647.1|	-	9.6e-11	42.0	2.5	3.6e-08	33.6	0.1	2.7	3	0	0	3	3	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.7	gi|568163306|ref|YP_008946647.1|	-	7.1e-09	35.0	3.7	5.3e-07	28.9	0.1	3.4	2	1	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_22	PF13401.1	gi|568163306|ref|YP_008946647.1|	-	3.4e-08	33.7	0.3	0.0027	17.8	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
AAA_16	PF13191.1	gi|568163306|ref|YP_008946647.1|	-	1.4e-07	31.7	0.3	2e-05	24.6	0.2	2.3	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_17	PF13207.1	gi|568163306|ref|YP_008946647.1|	-	3.9e-05	24.4	0.7	0.00021	22.1	0.0	2.6	2	1	0	2	2	2	1	AAA	domain
DNA_pol3_delta2	PF13177.1	gi|568163306|ref|YP_008946647.1|	-	4e-05	23.3	0.1	0.039	13.6	0.0	3.1	2	1	0	2	2	2	1	DNA	polymerase	III,	delta	subunit
AAA_5	PF07728.9	gi|568163306|ref|YP_008946647.1|	-	7e-05	22.5	0.2	0.0026	17.4	0.0	2.4	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_25	PF13481.1	gi|568163306|ref|YP_008946647.1|	-	0.0001	21.7	0.2	0.00047	19.6	0.1	2.1	1	1	0	1	1	1	1	AAA	domain
Mg_chelatase	PF01078.16	gi|568163306|ref|YP_008946647.1|	-	0.00011	21.4	0.5	0.00077	18.6	0.1	2.1	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
IstB_IS21	PF01695.12	gi|568163306|ref|YP_008946647.1|	-	0.00027	20.4	0.0	0.00056	19.3	0.0	1.5	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_18	PF13238.1	gi|568163306|ref|YP_008946647.1|	-	0.00031	21.0	0.2	0.0013	19.0	0.1	2.2	2	1	0	2	2	1	1	AAA	domain
AAA_19	PF13245.1	gi|568163306|ref|YP_008946647.1|	-	0.00032	20.3	0.1	0.00091	18.9	0.1	1.8	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_2	PF07724.9	gi|568163306|ref|YP_008946647.1|	-	0.00066	19.6	0.2	0.0025	17.7	0.0	2.0	2	0	0	2	2	1	1	AAA	domain	(Cdc48	subfamily)
AAA_33	PF13671.1	gi|568163306|ref|YP_008946647.1|	-	0.00072	19.4	0.0	0.0014	18.5	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
Sigma54_activat	PF00158.21	gi|568163306|ref|YP_008946647.1|	-	0.00082	18.8	0.1	0.0069	15.8	0.0	2.2	2	0	0	2	2	2	1	Sigma-54	interaction	domain
DnaB_C	PF03796.10	gi|568163306|ref|YP_008946647.1|	-	0.0042	16.0	0.0	0.014	14.2	0.0	1.8	2	0	0	2	2	2	1	DnaB-like	helicase	C	terminal	domain
PhoH	PF02562.11	gi|568163306|ref|YP_008946647.1|	-	0.0043	16.3	0.2	0.0096	15.1	0.1	1.5	1	0	0	1	1	1	1	PhoH-like	protein
DUF2075	PF09848.4	gi|568163306|ref|YP_008946647.1|	-	0.0049	15.8	0.1	0.0084	15.1	0.0	1.4	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_14	PF13173.1	gi|568163306|ref|YP_008946647.1|	-	0.012	15.4	0.1	0.73	9.7	0.0	3.0	3	0	0	3	3	3	0	AAA	domain
T2SE	PF00437.15	gi|568163306|ref|YP_008946647.1|	-	0.014	14.3	0.4	0.034	13.0	0.2	1.7	1	1	1	2	2	2	0	Type	II/IV	secretion	system	protein
AAA_28	PF13521.1	gi|568163306|ref|YP_008946647.1|	-	0.014	15.3	0.9	0.034	14.1	0.1	2.1	2	1	1	3	3	2	0	AAA	domain
RNA_helicase	PF00910.17	gi|568163306|ref|YP_008946647.1|	-	0.015	15.4	0.0	0.031	14.4	0.0	1.5	1	0	0	1	1	1	0	RNA	helicase
Parvo_NS1	PF01057.12	gi|568163306|ref|YP_008946647.1|	-	0.027	13.3	0.0	0.044	12.6	0.0	1.3	1	0	0	1	1	1	0	Parvovirus	non-structural	protein	NS1
AAA_11	PF13086.1	gi|568163306|ref|YP_008946647.1|	-	0.035	13.6	0.0	0.065	12.8	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
NACHT	PF05729.7	gi|568163306|ref|YP_008946647.1|	-	0.04	13.5	0.0	0.09	12.4	0.0	1.6	1	0	0	1	1	1	0	NACHT	domain
AAA_30	PF13604.1	gi|568163306|ref|YP_008946647.1|	-	0.042	13.4	0.5	1.4	8.4	0.1	2.4	2	0	0	2	2	2	0	AAA	domain
MMR_HSR1	PF01926.18	gi|568163306|ref|YP_008946647.1|	-	0.046	13.6	0.0	0.11	12.4	0.0	1.8	1	0	0	1	1	1	0	50S	ribosome-binding	GTPase
ABC_tran	PF00005.22	gi|568163306|ref|YP_008946647.1|	-	0.051	13.8	0.0	0.14	12.4	0.0	1.7	1	0	0	1	1	1	0	ABC	transporter
PfkB	PF00294.19	gi|568163307|ref|YP_008946648.1|	-	4.9e-45	153.9	0.0	1.7e-44	152.1	0.0	1.8	1	1	0	1	1	1	1	pfkB	family	carbohydrate	kinase
IMS	PF00817.15	gi|568163308|ref|YP_008946649.1|	-	4.9e-43	146.4	0.1	8.9e-43	145.6	0.1	1.4	1	0	0	1	1	1	1	impB/mucB/samB	family
IMS_HHH	PF11798.3	gi|568163308|ref|YP_008946649.1|	-	9.4e-10	37.9	0.0	3.3e-09	36.2	0.0	2.0	1	0	0	1	1	1	1	IMS	family	HHH	motif
HHH_5	PF14520.1	gi|568163308|ref|YP_008946649.1|	-	1.4e-06	28.3	0.1	3.9e-06	26.9	0.1	1.7	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
IMS_C	PF11799.3	gi|568163308|ref|YP_008946649.1|	-	8.2e-05	22.5	0.1	0.00034	20.5	0.0	2.0	2	0	0	2	2	2	1	impB/mucB/samB	family	C-terminal	domain
DUF1805	PF08827.6	gi|568163308|ref|YP_008946649.1|	-	0.0044	16.7	0.5	0.15	11.9	0.1	3.1	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF1805)
Cdd1	PF11731.3	gi|568163308|ref|YP_008946649.1|	-	0.0088	15.9	0.0	0.018	14.9	0.0	1.5	1	0	0	1	1	1	1	Pathogenicity	locus
BAF	PF02961.9	gi|568163308|ref|YP_008946649.1|	-	0.033	14.4	0.0	0.1	12.9	0.0	1.8	1	0	0	1	1	1	0	Barrier	to	autointegration	factor
TM1506	PF08973.5	gi|568163309|ref|YP_008946650.1|	-	0.049	13.1	0.3	0.065	12.7	0.2	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1893)
DUF4217	PF13959.1	gi|568163309|ref|YP_008946650.1|	-	0.074	12.5	0.0	0.13	11.7	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4217)
Glyoxalase	PF00903.20	gi|568163309|ref|YP_008946650.1|	-	0.11	12.5	0.0	0.12	12.3	0.0	1.2	1	0	0	1	1	1	0	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
RTC	PF01137.16	gi|568163310|ref|YP_008946651.1|	-	2.1e-80	268.7	0.1	2.4e-80	268.5	0.1	1.0	1	0	0	1	1	1	1	RNA	3'-terminal	phosphate	cyclase
RTC_insert	PF05189.8	gi|568163310|ref|YP_008946651.1|	-	1e-24	86.5	0.3	1.7e-24	85.8	0.2	1.4	1	0	0	1	1	1	1	RNA	3'-terminal	phosphate	cyclase	(RTC),	insert	domain
ADH_N	PF08240.7	gi|568163311|ref|YP_008946652.1|	-	2.6e-26	91.5	0.8	3.8e-26	90.9	0.6	1.3	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|568163311|ref|YP_008946652.1|	-	3e-16	59.1	0.0	5.7e-16	58.2	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|568163311|ref|YP_008946652.1|	-	2.8e-11	44.4	0.0	4.8e-11	43.6	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
NAD_binding_7	PF13241.1	gi|568163311|ref|YP_008946652.1|	-	0.0021	18.2	0.0	0.0035	17.5	0.0	1.4	1	0	0	1	1	1	1	Putative	NAD(P)-binding
ApbA	PF02558.11	gi|568163311|ref|YP_008946652.1|	-	0.013	14.9	0.0	0.024	14.1	0.0	1.4	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
AlaDh_PNT_C	PF01262.16	gi|568163311|ref|YP_008946652.1|	-	0.017	14.7	0.0	0.03	13.9	0.0	1.3	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
Pyr_redox_3	PF13738.1	gi|568163311|ref|YP_008946652.1|	-	0.061	13.3	0.0	0.097	12.7	0.0	1.3	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
TrkA_N	PF02254.13	gi|568163311|ref|YP_008946652.1|	-	0.067	13.1	0.5	0.14	12.1	0.1	1.7	2	0	0	2	2	2	0	TrkA-N	domain
CPSase_L_chain	PF00289.17	gi|568163311|ref|YP_008946652.1|	-	0.13	12.3	0.0	0.27	11.3	0.0	1.5	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
Saccharop_dh	PF03435.13	gi|568163311|ref|YP_008946652.1|	-	0.13	11.2	0.0	0.18	10.7	0.0	1.2	1	0	0	1	1	1	0	Saccharopine	dehydrogenase
Gln-synt_C	PF00120.19	gi|568163312|ref|YP_008946653.1|	-	2.2e-51	174.4	0.0	2.8e-51	174.1	0.0	1.1	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.14	gi|568163312|ref|YP_008946653.1|	-	0.0063	16.0	0.0	0.12	11.9	0.0	2.9	2	1	0	2	2	2	1	Glutamine	synthetase,	beta-Grasp	domain
Met_10	PF02475.11	gi|568163313|ref|YP_008946654.1|	-	1.6e-49	168.2	0.0	2e-49	167.8	0.0	1.1	1	0	0	1	1	1	1	Met-10+	like-protein
Fibrillarin	PF01269.12	gi|568163313|ref|YP_008946654.1|	-	0.01	14.7	0.0	0.016	14.1	0.0	1.3	1	0	0	1	1	1	0	Fibrillarin
PrmA	PF06325.8	gi|568163313|ref|YP_008946654.1|	-	0.018	14.1	0.0	0.027	13.6	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
S-AdoMet_synt_N	PF00438.15	gi|568163313|ref|YP_008946654.1|	-	0.034	14.3	0.1	0.26	11.5	0.0	2.1	2	0	0	2	2	2	0	S-adenosylmethionine	synthetase,	N-terminal	domain
Amidohydro_5	PF13594.1	gi|568163314|ref|YP_008946655.1|	-	0.00041	20.1	0.0	0.002	17.8	0.0	2.0	2	0	0	2	2	2	1	Amidohydrolase
Amidohydro_1	PF01979.15	gi|568163314|ref|YP_008946655.1|	-	0.0017	18.1	0.0	1.1	8.8	0.0	2.2	2	0	0	2	2	2	2	Amidohydrolase	family
PTH2	PF01981.11	gi|568163314|ref|YP_008946655.1|	-	0.0027	17.3	0.0	0.0043	16.7	0.0	1.3	1	0	0	1	1	1	1	Peptidyl-tRNA	hydrolase	PTH2
Chal_sti_synt_N	PF00195.14	gi|568163314|ref|YP_008946655.1|	-	0.027	13.7	0.0	0.043	13.0	0.0	1.2	1	0	0	1	1	1	0	Chalcone	and	stilbene	synthases,	N-terminal	domain
D-aminoacyl_C	PF07908.7	gi|568163314|ref|YP_008946655.1|	-	0.14	11.4	0.2	0.27	10.5	0.2	1.4	1	0	0	1	1	1	0	D-aminoacylase,	C-terminal	region
Peptidase_M54	PF07998.6	gi|568163315|ref|YP_008946656.1|	-	5e-37	127.5	0.8	6.6e-37	127.1	0.6	1.1	1	0	0	1	1	1	1	Peptidase	family	M54
Peptidase_M10	PF00413.19	gi|568163315|ref|YP_008946656.1|	-	0.00017	21.3	0.0	0.00018	21.2	0.0	1.2	1	0	0	1	1	1	1	Matrixin
Reprolysin_2	PF13574.1	gi|568163315|ref|YP_008946656.1|	-	0.00035	20.6	0.0	0.0004	20.4	0.0	1.1	1	0	0	1	1	1	1	Metallo-peptidase	family	M12B	Reprolysin-like
Peptidase_M43	PF05572.8	gi|568163315|ref|YP_008946656.1|	-	0.00046	19.8	0.9	0.00061	19.4	0.2	1.5	2	0	0	2	2	2	1	Pregnancy-associated	plasma	protein-A
Reprolysin_3	PF13582.1	gi|568163315|ref|YP_008946656.1|	-	0.0011	19.5	0.0	0.0015	19.0	0.0	1.2	1	0	0	1	1	1	1	Metallo-peptidase	family	M12B	Reprolysin-like
Reprolysin_4	PF13583.1	gi|568163315|ref|YP_008946656.1|	-	0.005	16.3	0.0	0.0073	15.8	0.0	1.3	1	0	0	1	1	1	1	Metallo-peptidase	family	M12B	Reprolysin-like
Reprolysin_5	PF13688.1	gi|568163315|ref|YP_008946656.1|	-	0.0058	16.5	0.1	0.0058	16.5	0.1	1.3	1	1	0	1	1	1	1	Metallo-peptidase	family	M12
Peptidase_M66	PF10462.4	gi|568163315|ref|YP_008946656.1|	-	0.0082	15.0	0.0	0.013	14.4	0.0	1.3	1	0	0	1	1	1	1	Peptidase	M66
Metallopep	PF12044.3	gi|568163315|ref|YP_008946656.1|	-	0.011	14.1	0.0	0.015	13.8	0.0	1.1	1	0	0	1	1	1	0	Putative	peptidase	family
Reprolysin	PF01421.14	gi|568163315|ref|YP_008946656.1|	-	0.014	14.9	1.0	0.02	14.4	0.1	1.6	2	0	0	2	2	2	0	Reprolysin	(M12B)	family	zinc	metalloprotease
Archease	PF01951.11	gi|568163316|ref|YP_008946657.1|	-	3.2e-44	150.2	1.1	3.5e-44	150.0	0.8	1.0	1	0	0	1	1	1	1	Archease	protein	family	(MTH1598/TM1083)
UPF0150	PF03681.10	gi|568163316|ref|YP_008946657.1|	-	0.048	13.3	0.1	0.25	10.9	0.1	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0150)
DUF4282	PF14110.1	gi|568163317|ref|YP_008946658.1|	-	0.11	12.7	3.0	0.13	12.4	2.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4282)
TaqI_C	PF12950.2	gi|568163317|ref|YP_008946658.1|	-	0.17	11.6	1.0	0.18	11.5	0.7	1.1	1	0	0	1	1	1	0	TaqI-like	C-terminal	specificity	domain
Cation_efflux	PF01545.16	gi|568163317|ref|YP_008946658.1|	-	0.3	10.1	6.0	0.32	10.0	4.1	1.0	1	0	0	1	1	1	0	Cation	efflux	family
TraA	PF05513.6	gi|568163317|ref|YP_008946658.1|	-	0.42	10.7	6.4	0.45	10.6	4.5	1.1	1	0	0	1	1	1	0	TraA
SdpI	PF13630.1	gi|568163317|ref|YP_008946658.1|	-	5	6.8	9.3	6.2	6.6	6.5	1.1	1	0	0	1	1	1	0	SdpI/YhfL	protein	family
PsbT	PF01405.12	gi|568163318|ref|YP_008946659.1|	-	4.6	6.9	7.9	25	4.5	0.2	2.8	2	0	0	2	2	2	0	Photosystem	II	reaction	centre	T	protein
DUF340	PF03956.8	gi|568163319|ref|YP_008946660.1|	-	0.035	13.3	0.2	0.037	13.3	0.2	1.0	1	0	0	1	1	1	0	Membrane	protein	of	unknown	function	(DUF340)
BTP	PF05232.7	gi|568163319|ref|YP_008946660.1|	-	4	7.2	8.0	4.4	7.1	1.4	2.1	2	0	0	2	2	2	0	Bacterial	Transmembrane	Pair	family
Cytidylate_kin2	PF13189.1	gi|568163320|ref|YP_008946661.1|	-	5.5e-23	81.8	0.7	2.8e-22	79.4	0.5	1.8	1	1	0	1	1	1	1	Cytidylate	kinase-like	family
AAA_18	PF13238.1	gi|568163320|ref|YP_008946661.1|	-	1.6e-21	76.9	0.5	2.1e-21	76.5	0.4	1.1	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|568163320|ref|YP_008946661.1|	-	2.7e-14	54.0	0.7	4.5e-14	53.3	0.4	1.5	1	1	0	1	1	1	1	AAA	domain
SKI	PF01202.17	gi|568163320|ref|YP_008946661.1|	-	4.1e-06	26.7	0.5	8e-06	25.8	0.3	1.6	1	1	0	1	1	1	1	Shikimate	kinase
AAA_33	PF13671.1	gi|568163320|ref|YP_008946661.1|	-	6.8e-06	26.0	0.0	0.0052	16.6	0.0	2.1	2	0	0	2	2	2	2	AAA	domain
AAA_24	PF13479.1	gi|568163320|ref|YP_008946661.1|	-	0.00014	21.5	0.0	0.00018	21.1	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
ADK	PF00406.17	gi|568163320|ref|YP_008946661.1|	-	0.00015	21.6	0.0	0.00051	19.9	0.0	1.8	2	0	0	2	2	2	1	Adenylate	kinase
AAA	PF00004.24	gi|568163320|ref|YP_008946661.1|	-	0.00066	19.8	0.1	0.0012	19.1	0.0	1.6	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
CoaE	PF01121.15	gi|568163320|ref|YP_008946661.1|	-	0.0021	17.4	0.0	0.38	10.1	0.0	2.2	2	0	0	2	2	2	1	Dephospho-CoA	kinase
PRK	PF00485.13	gi|568163320|ref|YP_008946661.1|	-	0.0021	17.6	0.5	0.29	10.6	0.0	2.2	1	1	0	2	2	2	1	Phosphoribulokinase	/	Uridine	kinase	family
Thymidylate_kin	PF02223.12	gi|568163320|ref|YP_008946661.1|	-	0.0026	17.1	0.1	0.76	9.1	0.0	2.4	2	1	0	2	2	2	1	Thymidylate	kinase
KTI12	PF08433.5	gi|568163320|ref|YP_008946661.1|	-	0.0027	16.9	0.0	0.0037	16.5	0.0	1.3	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
RNA_helicase	PF00910.17	gi|568163320|ref|YP_008946661.1|	-	0.0054	16.8	0.1	0.0096	16.0	0.1	1.5	1	1	0	1	1	1	1	RNA	helicase
Cytidylate_kin	PF02224.13	gi|568163320|ref|YP_008946661.1|	-	0.0056	16.1	0.2	0.0077	15.6	0.1	1.3	1	0	0	1	1	1	1	Cytidylate	kinase
Rad17	PF03215.10	gi|568163320|ref|YP_008946661.1|	-	0.0062	15.2	0.0	0.0075	15.0	0.0	1.2	1	0	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
AAA_22	PF13401.1	gi|568163320|ref|YP_008946661.1|	-	0.0064	16.6	0.0	0.0098	16.0	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
NTPase_1	PF03266.10	gi|568163320|ref|YP_008946661.1|	-	0.007	16.0	0.0	0.013	15.2	0.0	1.6	1	0	0	1	1	1	1	NTPase
Zeta_toxin	PF06414.7	gi|568163320|ref|YP_008946661.1|	-	0.0078	15.3	0.0	0.012	14.7	0.0	1.4	1	0	0	1	1	1	1	Zeta	toxin
RuvB_N	PF05496.7	gi|568163320|ref|YP_008946661.1|	-	0.0093	15.0	0.1	0.022	13.8	0.0	1.6	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_28	PF13521.1	gi|568163320|ref|YP_008946661.1|	-	0.013	15.4	0.0	0.022	14.7	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_5	PF07728.9	gi|568163320|ref|YP_008946661.1|	-	0.018	14.7	0.0	0.033	13.9	0.0	1.5	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
ABC_tran	PF00005.22	gi|568163320|ref|YP_008946661.1|	-	0.032	14.5	0.4	0.033	14.4	0.3	1.4	1	1	0	1	1	1	0	ABC	transporter
AAA_16	PF13191.1	gi|568163320|ref|YP_008946661.1|	-	0.032	14.2	0.3	0.046	13.7	0.2	1.5	1	1	0	1	1	1	0	AAA	ATPase	domain
UPF0160	PF03690.8	gi|568163320|ref|YP_008946661.1|	-	0.036	13.5	0.1	0.039	13.3	0.0	1.1	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0160)
Mg_chelatase	PF01078.16	gi|568163320|ref|YP_008946661.1|	-	0.059	12.5	0.1	0.11	11.6	0.1	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
dNK	PF01712.14	gi|568163320|ref|YP_008946661.1|	-	0.062	13.2	0.1	0.1	12.4	0.1	1.5	1	1	0	1	1	1	0	Deoxynucleoside	kinase
AAA_19	PF13245.1	gi|568163320|ref|YP_008946661.1|	-	0.065	13.0	0.0	0.11	12.2	0.0	1.4	1	0	0	1	1	1	0	Part	of	AAA	domain
Sigma54_activ_2	PF14532.1	gi|568163320|ref|YP_008946661.1|	-	0.07	13.1	0.0	0.13	12.3	0.0	1.5	1	1	0	1	1	1	0	Sigma-54	interaction	domain
APS_kinase	PF01583.15	gi|568163320|ref|YP_008946661.1|	-	0.088	12.4	0.0	0.18	11.4	0.0	1.6	2	0	0	2	2	2	0	Adenylylsulphate	kinase
CobU	PF02283.11	gi|568163320|ref|YP_008946661.1|	-	0.11	11.9	0.0	0.14	11.5	0.0	1.4	1	1	0	1	1	1	0	Cobinamide	kinase	/	cobinamide	phosphate	guanyltransferase
Ribosomal_L34e	PF01199.13	gi|568163321|ref|YP_008946662.1|	-	9.1e-27	93.1	4.0	9.9e-27	93.0	2.8	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L34e
zf-P11	PF03854.9	gi|568163321|ref|YP_008946662.1|	-	0.011	15.1	1.6	2.8	7.4	0.0	2.2	2	0	0	2	2	2	0	P-11	zinc	finger
Gin	PF10764.4	gi|568163321|ref|YP_008946662.1|	-	0.05	13.3	0.6	0.43	10.3	0.0	2.1	2	0	0	2	2	2	0	Inhibitor	of	sigma-G	Gin
zf-C3HC4_3	PF13920.1	gi|568163321|ref|YP_008946662.1|	-	0.13	11.9	0.7	4.7	6.9	0.0	2.1	2	0	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
Zn_ribbon_recom	PF13408.1	gi|568163321|ref|YP_008946662.1|	-	0.25	11.6	5.0	0.45	10.8	3.5	1.4	1	0	0	1	1	1	0	Recombinase	zinc	beta	ribbon	domain
Synaptobrevin	PF00957.16	gi|568163322|ref|YP_008946663.1|	-	0.00048	19.6	0.1	0.00048	19.6	0.1	2.2	3	0	0	3	3	3	1	Synaptobrevin
SPC12	PF06645.8	gi|568163322|ref|YP_008946663.1|	-	0.015	15.1	0.3	0.015	15.1	0.2	2.7	3	0	0	3	3	3	0	Microsomal	signal	peptidase	12	kDa	subunit	(SPC12)
DUF106	PF01956.11	gi|568163322|ref|YP_008946663.1|	-	0.023	14.2	3.6	0.035	13.6	2.5	1.4	1	1	0	1	1	1	0	Integral	membrane	protein	DUF106
Cytochrom_B_N	PF00033.14	gi|568163322|ref|YP_008946663.1|	-	0.1	11.9	3.0	0.12	11.6	1.0	1.7	1	1	1	2	2	2	0	Cytochrome	b(N-terminal)/b6/petB
Reticulon	PF02453.12	gi|568163322|ref|YP_008946663.1|	-	0.14	11.7	4.5	0.066	12.8	1.3	1.7	2	0	0	2	2	2	0	Reticulon
DUF2721	PF11026.3	gi|568163322|ref|YP_008946663.1|	-	0.63	9.6	4.1	2.1	7.9	2.8	2.0	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2721)
DUF4271	PF14093.1	gi|568163322|ref|YP_008946663.1|	-	0.9	9.1	12.4	98	2.5	8.6	2.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4271)
DUF2207	PF09972.4	gi|568163322|ref|YP_008946663.1|	-	2.4	6.6	6.4	0.27	9.7	1.3	1.6	1	1	1	2	2	2	0	Predicted	membrane	protein	(DUF2207)
AAA_18	PF13238.1	gi|568163323|ref|YP_008946664.1|	-	1.8e-11	44.4	0.1	2.3e-11	44.1	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|568163323|ref|YP_008946664.1|	-	4.6e-08	33.9	0.1	7.7e-08	33.1	0.0	1.3	1	1	0	1	1	1	1	AAA	domain
Thymidylate_kin	PF02223.12	gi|568163323|ref|YP_008946664.1|	-	4.2e-05	23.0	0.0	0.33	10.3	0.0	2.8	3	0	0	3	3	3	2	Thymidylate	kinase
NTPase_1	PF03266.10	gi|568163323|ref|YP_008946664.1|	-	0.0008	19.1	0.2	0.0015	18.2	0.1	1.4	1	0	0	1	1	1	1	NTPase
AAA_22	PF13401.1	gi|568163323|ref|YP_008946664.1|	-	0.00089	19.4	0.0	0.0013	18.9	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
SRP54	PF00448.17	gi|568163323|ref|YP_008946664.1|	-	0.00094	18.6	0.0	0.0012	18.3	0.0	1.2	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
KTI12	PF08433.5	gi|568163323|ref|YP_008946664.1|	-	0.0043	16.2	0.0	0.0061	15.8	0.0	1.2	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
ArgK	PF03308.11	gi|568163323|ref|YP_008946664.1|	-	0.0047	15.7	0.0	0.0083	14.9	0.0	1.5	1	0	0	1	1	1	1	ArgK	protein
AAA_14	PF13173.1	gi|568163323|ref|YP_008946664.1|	-	0.0061	16.4	0.2	0.015	15.2	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
ATP_bind_1	PF03029.12	gi|568163323|ref|YP_008946664.1|	-	0.011	15.2	0.0	0.014	14.8	0.0	1.2	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
AAA_33	PF13671.1	gi|568163323|ref|YP_008946664.1|	-	0.016	15.1	0.1	0.086	12.7	0.1	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_30	PF13604.1	gi|568163323|ref|YP_008946664.1|	-	0.025	14.1	0.0	0.05	13.1	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
DUF2075	PF09848.4	gi|568163323|ref|YP_008946664.1|	-	0.036	13.0	0.2	0.052	12.5	0.1	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_19	PF13245.1	gi|568163323|ref|YP_008946664.1|	-	0.043	13.5	0.0	0.11	12.2	0.0	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_16	PF13191.1	gi|568163323|ref|YP_008946664.1|	-	0.044	13.7	0.0	0.062	13.2	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_28	PF13521.1	gi|568163323|ref|YP_008946664.1|	-	0.064	13.2	0.0	0.15	11.9	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
MMR_HSR1	PF01926.18	gi|568163323|ref|YP_008946664.1|	-	0.1	12.5	0.5	0.21	11.5	0.3	1.6	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
Viral_helicase1	PF01443.13	gi|568163323|ref|YP_008946664.1|	-	0.1	12.0	0.0	0.15	11.5	0.0	1.4	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
SecY	PF00344.15	gi|568163324|ref|YP_008946665.1|	-	9.1e-79	264.8	36.7	1.3e-78	264.3	25.4	1.2	1	0	0	1	1	1	1	SecY	translocase
Plug_translocon	PF10559.4	gi|568163324|ref|YP_008946665.1|	-	2.6e-09	36.4	2.5	2.6e-09	36.4	1.7	2.7	2	0	0	2	2	2	1	Plug	domain	of	Sec61p
Ribosomal_L18e	PF00828.14	gi|568163325|ref|YP_008946666.1|	-	4.4e-30	104.6	2.7	5.7e-30	104.3	1.8	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L18e/L15
Ribosomal_L30	PF00327.15	gi|568163326|ref|YP_008946667.1|	-	3.4e-14	52.1	0.0	4.4e-13	48.5	0.0	2.2	2	0	0	2	2	2	1	Ribosomal	protein	L30p/L7e
DUF4368	PF14287.1	gi|568163326|ref|YP_008946667.1|	-	0.041	13.6	0.0	0.088	12.6	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4368)
Ribosomal_S5_C	PF03719.10	gi|568163327|ref|YP_008946668.1|	-	1.6e-20	72.1	0.1	3.5e-20	71.0	0.0	1.6	2	0	0	2	2	2	1	Ribosomal	protein	S5,	C-terminal	domain
Ribosomal_S5	PF00333.15	gi|568163327|ref|YP_008946668.1|	-	1.4e-17	63.2	0.4	2.3e-17	62.4	0.3	1.4	1	0	0	1	1	1	1	Ribosomal	protein	S5,	N-terminal	domain
Hs1pro-1_N	PF07231.7	gi|568163327|ref|YP_008946668.1|	-	0.046	13.3	0.0	0.065	12.8	0.0	1.2	1	0	0	1	1	1	0	Hs1pro-1	N-terminus
OCIA	PF07051.6	gi|568163327|ref|YP_008946668.1|	-	0.093	12.1	0.0	0.15	11.4	0.0	1.3	1	0	0	1	1	1	0	Ovarian	carcinoma	immunoreactive	antigen	(OCIA)
Ribosomal_L18p	PF00861.17	gi|568163328|ref|YP_008946669.1|	-	1.6e-34	118.6	0.3	2.6e-34	117.9	0.1	1.4	2	0	0	2	2	2	1	Ribosomal	L18p/L5e	family
Ribosomal_L18_c	PF14204.1	gi|568163328|ref|YP_008946669.1|	-	1.4e-11	44.7	0.0	2.5e-11	43.9	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	L18	C-terminal	region
Ribosomal_L19e	PF01280.15	gi|568163329|ref|YP_008946670.1|	-	5.6e-51	172.2	12.0	6.1e-51	172.0	8.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L19e
S4	PF01479.20	gi|568163329|ref|YP_008946670.1|	-	0.14	11.5	0.0	0.14	11.5	0.0	2.1	2	0	0	2	2	2	0	S4	domain
Ribosomal_L32e	PF01655.13	gi|568163330|ref|YP_008946671.1|	-	4.6e-38	129.6	0.3	6.4e-38	129.1	0.2	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L32
DUF3933	PF13069.1	gi|568163330|ref|YP_008946671.1|	-	0.16	11.6	0.4	11	5.7	0.1	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3933)
Ribosomal_L6	PF00347.18	gi|568163331|ref|YP_008946672.1|	-	1.1e-27	96.3	8.7	1.9e-13	50.6	0.8	2.1	2	0	0	2	2	2	2	Ribosomal	protein	L6
PAP_fibrillin	PF04755.7	gi|568163331|ref|YP_008946672.1|	-	0.02	14.6	0.2	0.22	11.2	0.0	2.1	1	1	1	2	2	2	0	PAP_fibrillin
RNA_bind_2	PF10133.4	gi|568163331|ref|YP_008946672.1|	-	0.033	14.2	3.9	1.8	8.6	0.4	3.2	2	2	1	3	3	3	0	Predicted	RNA-binding	protein
ETRAMP	PF09716.5	gi|568163331|ref|YP_008946672.1|	-	0.034	14.0	0.2	0.067	13.1	0.1	1.6	1	0	0	1	1	1	0	Malarial	early	transcribed	membrane	protein	(ETRAMP)
Adeno_52K	PF03052.10	gi|568163331|ref|YP_008946672.1|	-	0.083	12.1	0.0	0.12	11.5	0.0	1.2	1	0	0	1	1	1	0	Adenoviral	protein	L1	52/55-kDa
DNA_ligase_OB	PF03120.11	gi|568163331|ref|YP_008946672.1|	-	0.12	12.0	1.4	0.17	11.5	0.3	1.8	2	1	0	2	2	2	0	NAD-dependent	DNA	ligase	OB-fold	domain
HSP20	PF00011.16	gi|568163331|ref|YP_008946672.1|	-	0.47	10.3	2.7	3.4	7.5	0.1	2.7	3	1	0	3	3	3	0	Hsp20/alpha	crystallin	family
Ribosomal_S8	PF00410.14	gi|568163332|ref|YP_008946673.1|	-	3.3e-23	81.9	0.0	4.3e-23	81.5	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S8
Ribosomal_S14	PF00253.16	gi|568163333|ref|YP_008946674.1|	-	4.9e-15	54.6	4.7	5.3e-15	54.5	3.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S14p/S29e
zf-HYPF	PF07503.7	gi|568163333|ref|YP_008946674.1|	-	0.00015	21.0	0.4	0.029	13.7	0.0	2.2	2	0	0	2	2	2	2	HypF	finger
Zn_Tnp_IS1595	PF12760.2	gi|568163333|ref|YP_008946674.1|	-	0.0013	18.4	1.9	0.0018	18.0	1.3	1.2	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
zf-FPG_IleRS	PF06827.9	gi|568163333|ref|YP_008946674.1|	-	0.027	14.0	2.1	0.045	13.3	1.4	1.3	1	0	0	1	1	1	0	Zinc	finger	found	in	FPG	and	IleRS
zf-P11	PF03854.9	gi|568163333|ref|YP_008946674.1|	-	0.034	13.6	0.9	0.046	13.1	0.6	1.2	1	0	0	1	1	1	0	P-11	zinc	finger
Ribosomal_L37ae	PF01780.14	gi|568163333|ref|YP_008946674.1|	-	0.098	12.5	0.2	0.13	12.1	0.2	1.2	1	0	0	1	1	1	0	Ribosomal	L37ae	protein	family
DNA_RNApol_7kD	PF03604.8	gi|568163333|ref|YP_008946674.1|	-	0.14	11.6	2.2	5.1	6.6	0.1	2.2	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
A2L_zn_ribbon	PF08792.5	gi|568163333|ref|YP_008946674.1|	-	0.14	11.6	2.1	0.2	11.1	1.5	1.1	1	0	0	1	1	1	0	A2L	zinc	ribbon	domain
DZR	PF12773.2	gi|568163333|ref|YP_008946674.1|	-	0.16	11.7	0.9	0.25	11.2	0.6	1.4	1	1	0	1	1	1	0	Double	zinc	ribbon
Ribosomal_L5_C	PF00673.16	gi|568163334|ref|YP_008946675.1|	-	3.6e-25	87.5	0.0	6.7e-25	86.6	0.0	1.4	1	0	0	1	1	1	1	ribosomal	L5P	family	C-terminus
Ribosomal_L5	PF00281.14	gi|568163334|ref|YP_008946675.1|	-	9.1e-22	76.6	0.1	1.6e-21	75.8	0.1	1.4	1	0	0	1	1	1	1	Ribosomal	protein	L5
Ribosomal_S4e	PF00900.15	gi|568163335|ref|YP_008946676.1|	-	3.5e-24	84.2	0.2	1e-23	82.8	0.2	1.8	1	0	0	1	1	1	1	Ribosomal	family	S4e
S4	PF01479.20	gi|568163335|ref|YP_008946676.1|	-	1.2e-11	43.8	0.1	2.2e-11	43.0	0.1	1.5	1	0	0	1	1	1	1	S4	domain
RS4NT	PF08071.7	gi|568163335|ref|YP_008946676.1|	-	2.3e-07	30.5	0.3	4.4e-07	29.6	0.2	1.5	1	0	0	1	1	1	1	RS4NT	(NUC023)	domain
S4_2	PF13275.1	gi|568163335|ref|YP_008946676.1|	-	0.0015	18.0	0.0	0.0033	16.9	0.0	1.5	1	0	0	1	1	1	1	S4	domain
Rad60-SLD	PF11976.3	gi|568163335|ref|YP_008946676.1|	-	0.0017	17.9	0.1	0.0058	16.2	0.0	1.8	2	0	0	2	2	2	1	Ubiquitin-2	like	Rad60	SUMO-like
KOW	PF00467.24	gi|568163335|ref|YP_008946676.1|	-	0.022	14.4	0.1	0.081	12.6	0.0	2.0	1	0	0	1	1	1	0	KOW	motif
DUF1042	PF06294.6	gi|568163335|ref|YP_008946676.1|	-	0.055	13.0	0.2	0.11	12.0	0.0	1.6	2	0	0	2	2	2	0	Domain	of	Unknown	Function	(DUF1042)
KOW	PF00467.24	gi|568163336|ref|YP_008946677.1|	-	1e-06	28.2	2.3	2.1e-06	27.2	1.6	1.5	1	0	0	1	1	1	1	KOW	motif
Ribosomal_L14	PF00238.14	gi|568163337|ref|YP_008946678.1|	-	5.5e-37	126.2	0.1	6.3e-37	126.0	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L14p/L23e
PAS_3	PF08447.6	gi|568163337|ref|YP_008946678.1|	-	0.036	14.1	0.0	0.049	13.7	0.0	1.4	1	0	0	1	1	1	0	PAS	fold
Ribosomal_S17	PF00366.15	gi|568163338|ref|YP_008946679.1|	-	8.2e-18	64.2	0.2	1.1e-17	63.8	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S17
UPF0086	PF01868.11	gi|568163339|ref|YP_008946680.1|	-	5.6e-16	57.9	0.2	6e-16	57.8	0.2	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	UPF0086
Ribosomal_L29	PF00831.18	gi|568163340|ref|YP_008946681.1|	-	2e-20	72.2	6.5	2.4e-20	71.9	4.5	1.1	1	0	0	1	1	1	1	Ribosomal	L29	protein
DUF29	PF01724.11	gi|568163340|ref|YP_008946681.1|	-	0.00023	21.0	1.9	0.00026	20.8	1.3	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF29
SPX	PF03105.14	gi|568163340|ref|YP_008946681.1|	-	0.039	13.7	0.9	0.038	13.7	0.6	1.1	1	0	0	1	1	1	0	SPX	domain
DUF1828	PF08861.5	gi|568163340|ref|YP_008946681.1|	-	0.1	12.2	0.3	0.12	11.9	0.2	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF1828
DUF4208	PF13907.1	gi|568163340|ref|YP_008946681.1|	-	0.27	11.4	2.9	0.31	11.2	2.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4208)
DUF1319	PF07028.6	gi|568163340|ref|YP_008946681.1|	-	0.67	10.1	5.0	1.5	9.0	1.5	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1319)
Ribosomal_S3_C	PF00189.15	gi|568163341|ref|YP_008946682.1|	-	3.5e-17	62.4	2.3	4.5e-17	62.0	0.7	1.9	2	0	0	2	2	2	1	Ribosomal	protein	S3,	C-terminal	domain
KH_2	PF07650.12	gi|568163341|ref|YP_008946682.1|	-	4.8e-15	54.8	1.9	5.7e-15	54.6	0.0	2.1	3	0	0	3	3	3	1	KH	domain
KH_3	PF13014.1	gi|568163341|ref|YP_008946682.1|	-	0.0097	15.5	1.3	0.015	14.9	0.1	1.9	2	0	0	2	2	2	1	KH	domain
KH_1	PF00013.24	gi|568163341|ref|YP_008946682.1|	-	0.011	15.3	0.3	0.011	15.3	0.2	2.3	2	0	0	2	2	2	0	KH	domain
Ribosomal_L22	PF00237.14	gi|568163342|ref|YP_008946683.1|	-	1.4e-33	114.9	0.3	1.6e-33	114.7	0.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L22p/L17e
Ribosomal_S19	PF00203.16	gi|568163343|ref|YP_008946684.1|	-	4.7e-26	90.2	1.0	6.2e-26	89.8	0.7	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S19
DUF4172	PF13776.1	gi|568163343|ref|YP_008946684.1|	-	0.012	15.7	0.3	3.8	7.6	0.0	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4172)
MerR_1	PF13411.1	gi|568163343|ref|YP_008946684.1|	-	0.19	11.4	2.2	0.15	11.8	0.5	1.6	2	0	0	2	2	2	0	MerR	HTH	family	regulatory	protein
Ribosomal_L2_C	PF03947.13	gi|568163344|ref|YP_008946685.1|	-	3.1e-40	136.9	2.5	4.2e-40	136.5	1.1	1.7	2	0	0	2	2	2	1	Ribosomal	Proteins	L2,	C-terminal	domain
Ribosomal_L2	PF00181.18	gi|568163344|ref|YP_008946685.1|	-	2.4e-11	43.4	0.0	6.9e-11	41.9	0.0	1.9	1	0	0	1	1	1	1	Ribosomal	Proteins	L2,	RNA	binding	domain
Ribosomal_L23	PF00276.15	gi|568163345|ref|YP_008946686.1|	-	3.1e-15	55.9	6.9	4.2e-15	55.4	4.8	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L23
ASL_C	PF08328.6	gi|568163345|ref|YP_008946686.1|	-	0.016	15.0	0.6	0.019	14.7	0.4	1.1	1	0	0	1	1	1	0	Adenylosuccinate	lyase	C-terminal
DUF2959	PF11172.3	gi|568163345|ref|YP_008946686.1|	-	0.022	14.5	0.2	0.025	14.3	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2959)
TusA	PF01206.12	gi|568163345|ref|YP_008946686.1|	-	0.053	13.1	0.5	0.072	12.7	0.3	1.4	1	1	0	1	1	1	0	Sulfurtransferase	TusA
Lumazine_bd	PF12870.2	gi|568163345|ref|YP_008946686.1|	-	0.12	12.4	3.2	0.15	12.1	2.2	1.1	1	0	0	1	1	1	0	Lumazine-binding	domain
Ribosomal_L4	PF00573.17	gi|568163346|ref|YP_008946687.1|	-	9.5e-36	122.9	0.1	1.1e-35	122.7	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L4/L1	family
DUF2149	PF09919.4	gi|568163346|ref|YP_008946687.1|	-	0.034	14.2	0.1	0.06	13.4	0.0	1.5	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2149)
DUF3913	PF13052.1	gi|568163346|ref|YP_008946687.1|	-	0.095	12.6	0.3	0.22	11.4	0.2	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3913)
Ribosomal_L3	PF00297.17	gi|568163347|ref|YP_008946688.1|	-	4.4e-55	186.9	0.0	5.1e-55	186.7	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L3
Methyltrn_RNA_3	PF02598.12	gi|568163348|ref|YP_008946689.1|	-	1.6e-26	93.3	0.1	3.5e-18	65.9	0.1	2.1	1	1	1	2	2	2	2	Putative	RNA	methyltransferase
tRNA-synt_1	PF00133.17	gi|568163349|ref|YP_008946690.1|	-	1.2e-187	624.5	1.7	1.7e-187	624.1	1.2	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|568163349|ref|YP_008946690.1|	-	4.6e-29	101.1	4.3	6.7e-29	100.6	2.0	2.0	2	0	0	2	2	2	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.6	gi|568163349|ref|YP_008946690.1|	-	7.8e-22	77.4	8.8	3e-07	29.4	0.0	5.2	3	2	1	4	4	4	3	tRNA	synthetases	class	I	(M)
tRNA-synt_1f	PF01921.13	gi|568163349|ref|YP_008946690.1|	-	0.00013	20.7	0.0	0.00042	19.0	0.0	1.8	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(K)
tRNA-synt_1_2	PF13603.1	gi|568163349|ref|YP_008946690.1|	-	0.00013	21.2	0.0	0.0013	18.0	0.0	2.5	2	1	0	2	2	2	1	Leucyl-tRNA	synthetase,	Domain	2
Rpr2	PF04032.11	gi|568163349|ref|YP_008946690.1|	-	0.032	14.0	2.0	0.49	10.3	0.3	3.1	3	0	0	3	3	3	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
Iso_dh	PF00180.15	gi|568163350|ref|YP_008946691.1|	-	1.5e-91	306.9	0.8	1.8e-91	306.7	0.6	1.0	1	0	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
PdxA	PF04166.7	gi|568163350|ref|YP_008946691.1|	-	0.011	14.9	0.0	0.023	13.8	0.0	1.4	1	0	0	1	1	1	0	Pyridoxal	phosphate	biosynthetic	protein	PdxA
DUF447	PF04289.7	gi|568163351|ref|YP_008946692.1|	-	8.5e-38	129.6	0.0	1e-37	129.3	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF447)
HAD_2	PF13419.1	gi|568163352|ref|YP_008946693.1|	-	2e-24	86.7	0.0	2.5e-24	86.4	0.0	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|568163352|ref|YP_008946693.1|	-	6.6e-11	41.7	0.0	1.2e-10	40.9	0.0	1.4	1	0	0	1	1	1	1	HAD-hyrolase-like
Hydrolase	PF00702.21	gi|568163352|ref|YP_008946693.1|	-	1.5e-09	38.6	0.0	2.8e-09	37.6	0.0	1.5	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.2	gi|568163352|ref|YP_008946693.1|	-	1.3e-05	25.4	0.4	2.8e-05	24.3	0.3	1.6	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_6	PF13344.1	gi|568163352|ref|YP_008946693.1|	-	0.027	14.3	0.0	0.14	12.0	0.0	2.2	3	0	0	3	3	3	0	Haloacid	dehalogenase-like	hydrolase
ATP-cone	PF03477.11	gi|568163352|ref|YP_008946693.1|	-	0.038	14.4	0.0	0.08	13.3	0.0	1.5	1	0	0	1	1	1	0	ATP	cone	domain
GTP_EFTU	PF00009.22	gi|568163353|ref|YP_008946694.1|	-	6.1e-59	198.6	0.2	9.5e-59	197.9	0.1	1.3	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
EFG_IV	PF03764.13	gi|568163353|ref|YP_008946694.1|	-	1e-32	112.1	0.1	6.6e-32	109.5	0.0	2.4	3	0	0	3	3	3	1	Elongation	factor	G,	domain	IV
EFG_II	PF14492.1	gi|568163353|ref|YP_008946694.1|	-	2.2e-21	75.5	0.1	6.5e-21	73.9	0.0	1.9	1	0	0	1	1	1	1	Elongation	Factor	G,	domain	II
EFG_C	PF00679.19	gi|568163353|ref|YP_008946694.1|	-	1.4e-20	72.8	0.0	5.1e-20	71.1	0.0	2.0	2	0	0	2	2	2	1	Elongation	factor	G	C-terminus
GTP_EFTU_D2	PF03144.20	gi|568163353|ref|YP_008946694.1|	-	9.8e-11	41.6	0.1	4.8e-10	39.4	0.0	2.3	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.18	gi|568163353|ref|YP_008946694.1|	-	0.00021	21.2	0.1	0.00054	19.9	0.1	1.7	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
ERCC4	PF02732.10	gi|568163354|ref|YP_008946695.1|	-	1.3e-26	93.0	0.3	2.4e-26	92.1	0.2	1.4	1	0	0	1	1	1	1	ERCC4	domain
HHH_2	PF12826.2	gi|568163354|ref|YP_008946695.1|	-	1e-06	28.5	0.0	2.9e-06	27.0	0.0	1.9	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_5	PF14520.1	gi|568163354|ref|YP_008946695.1|	-	7.9e-05	22.7	0.2	0.0004	20.5	0.0	2.3	3	0	0	3	3	3	1	Helix-hairpin-helix	domain
5_3_exonuc	PF01367.15	gi|568163354|ref|YP_008946695.1|	-	0.00033	20.8	0.3	0.00098	19.3	0.0	1.9	2	0	0	2	2	2	1	5'-3'	exonuclease,	C-terminal	SAM	fold
IMS_HHH	PF11798.3	gi|568163354|ref|YP_008946695.1|	-	0.085	12.9	0.0	0.49	10.5	0.0	2.3	2	0	0	2	2	2	0	IMS	family	HHH	motif
Prefoldin_2	PF01920.15	gi|568163355|ref|YP_008946696.1|	-	4e-23	81.2	17.9	4.5e-23	81.0	12.4	1.0	1	0	0	1	1	1	1	Prefoldin	subunit
DUF424	PF04242.8	gi|568163355|ref|YP_008946696.1|	-	0.0073	16.3	0.2	0.018	15.0	0.1	1.6	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF424)
DUF3584	PF12128.3	gi|568163355|ref|YP_008946696.1|	-	0.026	11.8	6.0	0.036	11.4	4.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
Methyltransf_27	PF13708.1	gi|568163355|ref|YP_008946696.1|	-	0.035	13.6	0.4	0.14	11.6	0.3	1.8	1	1	0	1	1	1	0	Methyltransferase	domain
Sas10	PF09368.5	gi|568163355|ref|YP_008946696.1|	-	0.064	13.4	2.4	0.1	12.7	1.6	1.3	1	0	0	1	1	1	0	Sas10	C-terminal	domain
MIF4G_like_2	PF09090.6	gi|568163355|ref|YP_008946696.1|	-	0.12	11.5	4.1	0.16	11.1	2.9	1.3	1	0	0	1	1	1	0	MIF4G	like
ThiS	PF02597.15	gi|568163355|ref|YP_008946696.1|	-	0.13	12.6	1.6	0.2	12.1	0.5	1.8	2	0	0	2	2	2	0	ThiS	family
DUF87	PF01935.12	gi|568163355|ref|YP_008946696.1|	-	0.16	11.7	4.1	0.19	11.4	2.8	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF87
Prefoldin	PF02996.12	gi|568163355|ref|YP_008946696.1|	-	0.41	10.3	12.5	2.2	7.9	4.1	2.3	1	1	1	2	2	2	0	Prefoldin	subunit
RseA_C	PF03873.8	gi|568163355|ref|YP_008946696.1|	-	0.5	10.2	5.6	0.23	11.3	0.9	2.2	2	0	0	2	2	2	0	Anti	sigma-E	protein	RseA,	C-terminal	domain
DUF3186	PF11382.3	gi|568163355|ref|YP_008946696.1|	-	0.51	9.4	5.8	0.29	10.2	0.7	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3186)
TPR_MLP1_2	PF07926.7	gi|568163355|ref|YP_008946696.1|	-	0.86	9.3	12.9	1.7	8.4	3.1	2.1	2	0	0	2	2	2	0	TPR/MLP1/MLP2-like	protein
DUF4140	PF13600.1	gi|568163355|ref|YP_008946696.1|	-	1.2	9.5	4.7	2.7	8.4	0.4	2.2	2	0	0	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
UPF0449	PF15136.1	gi|568163355|ref|YP_008946696.1|	-	1.8	8.7	7.8	0.38	10.9	1.7	1.9	1	1	1	2	2	2	0	Uncharacterised	protein	family	UPF0449
CENP-F_leu_zip	PF10473.4	gi|568163355|ref|YP_008946696.1|	-	2.4	8.0	17.3	4	7.2	6.4	2.3	1	1	1	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Gon7	PF08738.5	gi|568163355|ref|YP_008946696.1|	-	3.2	7.7	6.5	13	5.8	1.4	2.5	2	1	0	2	2	2	0	Gon7	family
SlyX	PF04102.7	gi|568163355|ref|YP_008946696.1|	-	3.4	8.0	10.1	0.4	11.0	1.6	2.2	2	0	0	2	2	2	0	SlyX
DUF4559	PF15112.1	gi|568163355|ref|YP_008946696.1|	-	4.2	6.4	9.6	8.4	5.4	6.6	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4559)
PilO	PF04350.8	gi|568163355|ref|YP_008946696.1|	-	7.7	6.3	11.6	6.2	6.7	1.6	2.3	1	1	0	2	2	2	0	Pilus	assembly	protein,	PilO
U1snRNP70_N	PF12220.3	gi|568163355|ref|YP_008946696.1|	-	8.3	6.8	9.9	4.7	7.5	3.1	2.6	1	1	1	2	2	2	0	U1	small	nuclear	ribonucleoprotein	of	70kDa	MW	N	terminal
Pcc1	PF09341.5	gi|568163356|ref|YP_008946697.1|	-	0.0085	16.1	0.2	0.01	15.8	0.2	1.4	1	1	0	1	1	1	1	Transcription	factor	Pcc1
DUF2292	PF10055.4	gi|568163356|ref|YP_008946697.1|	-	1.2	8.5	3.4	3.1	7.2	0.1	2.8	2	1	1	3	3	3	0	Uncharacterized	small	protein	(DUF2292)
Brix	PF04427.13	gi|568163357|ref|YP_008946698.1|	-	1e-15	57.8	0.2	1.2e-15	57.6	0.1	1.1	1	0	0	1	1	1	1	Brix	domain
Ribosomal_L37ae	PF01780.14	gi|568163358|ref|YP_008946699.1|	-	6e-23	80.5	7.3	6.4e-23	80.4	5.1	1.0	1	0	0	1	1	1	1	Ribosomal	L37ae	protein	family
Zn_Tnp_IS1595	PF12760.2	gi|568163358|ref|YP_008946699.1|	-	0.0025	17.5	6.3	0.0037	17.0	4.2	1.5	1	1	1	2	2	2	1	Transposase	zinc-ribbon	domain
Rep_fac-A_C	PF08646.5	gi|568163358|ref|YP_008946699.1|	-	0.0051	16.5	1.7	0.0055	16.4	1.2	1.1	1	0	0	1	1	1	1	Replication	factor-A	C	terminal	domain
OrfB_Zn_ribbon	PF07282.6	gi|568163358|ref|YP_008946699.1|	-	0.016	14.8	1.8	0.021	14.4	1.2	1.2	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
DUF4379	PF14311.1	gi|568163358|ref|YP_008946699.1|	-	0.032	14.0	9.1	0.41	10.4	0.8	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4379)
zf-H2C2_2	PF13465.1	gi|568163358|ref|YP_008946699.1|	-	0.16	12.3	2.2	0.29	11.4	0.2	2.0	2	0	0	2	2	2	0	Zinc-finger	double	domain
DnaJ_CXXCXGXG	PF00684.14	gi|568163358|ref|YP_008946699.1|	-	0.21	11.6	2.1	0.38	10.8	1.4	1.5	1	1	0	1	1	1	0	DnaJ	central	domain
CpXC	PF14353.1	gi|568163358|ref|YP_008946699.1|	-	0.23	11.4	1.1	0.81	9.6	0.9	1.7	1	1	1	2	2	2	0	CpXC	protein
Prim_Zn_Ribbon	PF08273.7	gi|568163358|ref|YP_008946699.1|	-	0.31	11.1	5.7	0.4	10.7	2.9	1.9	2	1	0	2	2	2	0	Zinc-binding	domain	of	primase-helicase
zinc_ribbon_5	PF13719.1	gi|568163358|ref|YP_008946699.1|	-	0.69	9.5	3.8	11	5.7	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF3279	PF11682.3	gi|568163358|ref|YP_008946699.1|	-	1.4	8.4	5.0	4.3	6.9	2.9	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3279)
PHD	PF00628.24	gi|568163358|ref|YP_008946699.1|	-	3.3	7.4	6.0	34	4.2	3.9	2.0	1	1	1	2	2	2	0	PHD-finger
RNase_PH	PF01138.16	gi|568163359|ref|YP_008946700.1|	-	1.2e-30	106.4	0.0	1.9e-30	105.8	0.0	1.3	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.10	gi|568163359|ref|YP_008946700.1|	-	2.9e-09	36.7	0.2	1.2e-08	34.7	0.0	2.1	2	0	0	2	2	2	1	3'	exoribonuclease	family,	domain	2
RNase_PH	PF01138.16	gi|568163360|ref|YP_008946701.1|	-	5.7e-37	126.9	0.0	8.4e-37	126.4	0.0	1.3	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.10	gi|568163360|ref|YP_008946701.1|	-	2.7e-13	49.6	0.0	5e-13	48.7	0.0	1.5	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	2
ketoacyl-synt	PF00109.21	gi|568163360|ref|YP_008946701.1|	-	0.1	12.0	0.0	0.14	11.6	0.0	1.2	1	0	0	1	1	1	0	Beta-ketoacyl	synthase,	N-terminal	domain
KH_1	PF00013.24	gi|568163361|ref|YP_008946702.1|	-	9e-07	28.4	0.7	2e-06	27.3	0.5	1.6	1	0	0	1	1	1	1	KH	domain
S1	PF00575.18	gi|568163361|ref|YP_008946702.1|	-	3e-05	24.0	0.0	6.1e-05	23.0	0.0	1.6	1	0	0	1	1	1	1	S1	RNA	binding	domain
KH_3	PF13014.1	gi|568163361|ref|YP_008946702.1|	-	0.0017	17.9	0.2	0.0017	17.9	0.1	2.1	2	0	0	2	2	2	1	KH	domain
KH_2	PF07650.12	gi|568163361|ref|YP_008946702.1|	-	0.045	13.2	0.1	0.1	12.1	0.1	1.6	1	0	0	1	1	1	0	KH	domain
SBDS	PF01172.13	gi|568163362|ref|YP_008946703.1|	-	2.5e-28	97.6	0.1	4.3e-28	96.9	0.1	1.4	1	0	0	1	1	1	1	Shwachman-Bodian-Diamond	syndrome	(SBDS)	protein
SBDS_C	PF09377.5	gi|568163362|ref|YP_008946703.1|	-	2.4e-21	75.7	0.8	3.9e-21	75.0	0.6	1.3	1	0	0	1	1	1	1	SBDS	protein	C-terminal	domain
P53_tetramer	PF07710.6	gi|568163362|ref|YP_008946703.1|	-	0.091	11.8	0.0	0.2	10.7	0.0	1.6	1	0	0	1	1	1	0	P53	tetramerisation	motif
Proteasome	PF00227.21	gi|568163363|ref|YP_008946704.1|	-	3.2e-59	199.4	0.0	4.6e-59	198.9	0.0	1.2	1	0	0	1	1	1	1	Proteasome	subunit
Proteasome_A_N	PF10584.4	gi|568163363|ref|YP_008946704.1|	-	4.4e-13	48.2	0.9	1.1e-12	46.9	0.3	2.0	2	0	0	2	2	2	1	Proteasome	subunit	A	N-terminal	signature
RNase_P_Rpp14	PF01900.14	gi|568163364|ref|YP_008946705.1|	-	1.4e-15	57.1	0.1	2.2e-15	56.4	0.1	1.3	1	0	0	1	1	1	1	Rpp14/Pop5	family
Tmemb_170	PF10190.4	gi|568163364|ref|YP_008946705.1|	-	0.0088	16.0	1.1	0.011	15.7	0.7	1.3	1	1	0	1	1	1	1	Putative	transmembrane	protein	170
DUF1201	PF06716.6	gi|568163364|ref|YP_008946705.1|	-	9.6	6.1	8.4	49	3.8	5.8	2.1	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1201)
RNase_P_p30	PF01876.11	gi|568163365|ref|YP_008946706.1|	-	3.4e-20	71.7	0.2	4.4e-20	71.4	0.1	1.1	1	0	0	1	1	1	1	RNase	P	subunit	p30
Como_SCP	PF02248.11	gi|568163365|ref|YP_008946706.1|	-	0.041	13.2	0.1	0.056	12.7	0.0	1.2	1	0	0	1	1	1	0	Small	coat	protein
RNA_binding	PF01877.12	gi|568163366|ref|YP_008946707.1|	-	7.2e-27	93.7	2.2	9e-27	93.4	1.5	1.1	1	0	0	1	1	1	1	RNA	binding
Rsbr_N	PF08678.5	gi|568163366|ref|YP_008946707.1|	-	0.03	14.1	0.8	0.15	11.9	0.1	2.1	1	1	2	3	3	3	0	Rsbr	N	terminal
Ribosomal_L15e	PF00827.12	gi|568163367|ref|YP_008946708.1|	-	1.9e-73	246.1	9.9	1.9e-73	246.1	6.8	1.6	1	1	1	2	2	2	1	Ribosomal	L15
MMR_HSR1_C	PF08438.5	gi|568163368|ref|YP_008946709.1|	-	1e-35	122.2	1.6	1.3e-35	121.8	0.3	1.8	2	0	0	2	2	2	1	GTPase	of	unknown	function	C-terminal
MMR_HSR1	PF01926.18	gi|568163368|ref|YP_008946709.1|	-	9.4e-19	67.4	0.1	6.4e-18	64.8	0.1	2.5	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
TGS	PF02824.16	gi|568163368|ref|YP_008946709.1|	-	3.5e-12	45.9	0.1	7.6e-12	44.8	0.1	1.6	1	0	0	1	1	1	1	TGS	domain
FeoB_N	PF02421.13	gi|568163368|ref|YP_008946709.1|	-	1.1e-07	31.2	0.2	0.00014	21.1	0.1	3.2	3	0	0	3	3	3	2	Ferrous	iron	transport	protein	B
Miro	PF08477.8	gi|568163368|ref|YP_008946709.1|	-	0.067	13.6	0.3	2.4	8.6	0.0	3.1	3	1	0	3	3	3	0	Miro-like	protein
YchF-GTPase_C	PF06071.8	gi|568163368|ref|YP_008946709.1|	-	0.067	12.9	0.1	0.6	9.9	0.1	2.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF933)
AAA_29	PF13555.1	gi|568163368|ref|YP_008946709.1|	-	0.13	11.8	0.1	0.56	9.7	0.0	2.1	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
NTP_transferase	PF00483.18	gi|568163369|ref|YP_008946710.1|	-	8.7e-37	126.7	0.0	1.1e-36	126.3	0.0	1.2	1	0	0	1	1	1	1	Nucleotidyl	transferase
Hexapep	PF00132.19	gi|568163369|ref|YP_008946710.1|	-	4e-26	89.3	15.3	5.8e-08	31.9	0.1	4.9	2	1	3	5	5	5	5	Bacterial	transferase	hexapeptide	(six	repeats)
NTP_transf_3	PF12804.2	gi|568163369|ref|YP_008946710.1|	-	1.1e-14	54.7	0.0	1.6e-14	54.3	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep_2	PF14602.1	gi|568163369|ref|YP_008946710.1|	-	3.9e-08	32.7	10.2	0.0018	17.8	0.7	4.2	4	1	1	5	5	5	3	Hexapeptide	repeat	of	succinyl-transferase
IspD	PF01128.14	gi|568163369|ref|YP_008946710.1|	-	8.6e-07	28.6	0.1	1.6e-06	27.8	0.1	1.5	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
CTP_transf_3	PF02348.14	gi|568163369|ref|YP_008946710.1|	-	0.12	11.9	0.0	0.18	11.4	0.0	1.2	1	0	0	1	1	1	0	Cytidylyltransferase
Ribosomal_S3Ae	PF01015.13	gi|568163370|ref|YP_008946711.1|	-	2e-73	245.8	2.4	2.2e-73	245.7	1.7	1.0	1	0	0	1	1	1	1	Ribosomal	S3Ae	family
DUF4348	PF14254.1	gi|568163370|ref|YP_008946711.1|	-	0.049	12.7	0.0	0.083	11.9	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4348)
SpoU_methylase	PF00588.14	gi|568163371|ref|YP_008946712.1|	-	6.4e-28	97.4	0.0	8.9e-28	96.9	0.0	1.2	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
Methyltrn_RNA_4	PF09936.4	gi|568163371|ref|YP_008946712.1|	-	0.0022	17.4	0.0	0.051	13.0	0.0	2.2	1	1	0	1	1	1	1	SAM-dependent	RNA	methyltransferase
Methyltransf_26	PF13659.1	gi|568163372|ref|YP_008946713.1|	-	9.6e-14	51.4	0.0	1.1e-13	51.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|568163372|ref|YP_008946713.1|	-	2.3e-13	49.8	0.0	2.6e-13	49.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
PrmA	PF06325.8	gi|568163372|ref|YP_008946713.1|	-	5.4e-12	45.4	0.1	7.6e-12	44.9	0.1	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_31	PF13847.1	gi|568163372|ref|YP_008946713.1|	-	1.2e-06	28.2	0.0	1.3e-06	28.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Met_10	PF02475.11	gi|568163372|ref|YP_008946713.1|	-	2.4e-05	24.0	0.0	2.4e-05	24.0	0.0	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
Cons_hypoth95	PF03602.10	gi|568163372|ref|YP_008946713.1|	-	6.8e-05	22.3	0.0	0.00011	21.7	0.0	1.2	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltransf_18	PF12847.2	gi|568163372|ref|YP_008946713.1|	-	0.0001	22.8	0.0	0.00013	22.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|568163372|ref|YP_008946713.1|	-	0.00029	20.5	0.0	0.00041	20.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
FtsJ	PF01728.14	gi|568163372|ref|YP_008946713.1|	-	0.00053	20.0	0.0	0.00075	19.5	0.0	1.3	1	1	0	1	1	1	1	FtsJ-like	methyltransferase
RrnaAD	PF00398.15	gi|568163372|ref|YP_008946713.1|	-	0.00061	18.8	0.1	0.0011	18.0	0.0	1.4	2	0	0	2	2	2	1	Ribosomal	RNA	adenine	dimethylase
PCMT	PF01135.14	gi|568163372|ref|YP_008946713.1|	-	0.0034	16.9	0.0	0.0047	16.4	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
CMAS	PF02353.15	gi|568163372|ref|YP_008946713.1|	-	0.0038	16.3	0.0	0.0051	15.9	0.0	1.1	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_11	PF08241.7	gi|568163372|ref|YP_008946713.1|	-	0.0058	17.0	0.0	0.0092	16.4	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
N6_Mtase	PF02384.11	gi|568163372|ref|YP_008946713.1|	-	0.009	15.1	0.1	0.086	11.8	0.0	2.0	1	1	0	1	1	1	1	N-6	DNA	Methylase
DUF3419	PF11899.3	gi|568163372|ref|YP_008946713.1|	-	0.017	13.8	0.0	0.026	13.2	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3419)
Methyltransf_12	PF08242.7	gi|568163372|ref|YP_008946713.1|	-	0.019	15.4	0.0	0.031	14.7	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_32	PF13679.1	gi|568163372|ref|YP_008946713.1|	-	0.05	13.2	0.0	0.077	12.6	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|568163372|ref|YP_008946713.1|	-	0.058	13.7	0.0	0.09	13.1	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
DOT1	PF08123.8	gi|568163372|ref|YP_008946713.1|	-	0.068	12.4	0.0	0.11	11.8	0.0	1.3	1	0	0	1	1	1	0	Histone	methylation	protein	DOT1
MetW	PF07021.7	gi|568163372|ref|YP_008946713.1|	-	0.072	12.4	0.0	0.11	11.8	0.0	1.3	1	0	0	1	1	1	0	Methionine	biosynthesis	protein	MetW
MethyltransfD12	PF02086.10	gi|568163372|ref|YP_008946713.1|	-	0.091	12.2	0.1	0.29	10.5	0.0	1.7	1	1	0	2	2	2	0	D12	class	N6	adenine-specific	DNA	methyltransferase
RrnaAD	PF00398.15	gi|568163373|ref|YP_008946714.1|	-	3.7e-24	85.1	0.2	4.8e-24	84.8	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
RHH_1	PF01402.16	gi|568163373|ref|YP_008946714.1|	-	0.033	14.0	0.1	12	6.0	0.0	2.4	2	0	0	2	2	2	0	Ribbon-helix-helix	protein,	copG	family
DUF655	PF04919.7	gi|568163374|ref|YP_008946715.1|	-	8.8e-58	194.9	3.4	1.1e-57	194.7	2.4	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF655)
HHH_6	PF14579.1	gi|568163374|ref|YP_008946715.1|	-	0.071	13.1	0.0	0.16	12.0	0.0	1.6	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
RNA_pol_Rpb4	PF03874.11	gi|568163375|ref|YP_008946716.1|	-	5.2e-13	49.0	1.6	6e-13	48.8	1.1	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb4
DUF1160	PF06648.6	gi|568163375|ref|YP_008946716.1|	-	0.0052	16.5	1.2	0.027	14.2	0.0	2.1	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF1160)
HTH_36	PF13730.1	gi|568163375|ref|YP_008946716.1|	-	0.0062	16.6	0.3	0.67	10.1	0.0	2.7	2	0	0	2	2	2	1	Helix-turn-helix	domain
Arch_fla_DE	PF04659.8	gi|568163375|ref|YP_008946716.1|	-	0.014	15.1	0.0	0.02	14.7	0.0	1.3	1	0	0	1	1	1	0	Archaeal	flagella	protein
RIH_assoc	PF08454.6	gi|568163375|ref|YP_008946716.1|	-	0.03	13.9	0.2	0.063	12.9	0.2	1.7	1	1	0	1	1	1	0	RyR	and	IP3R	Homology	associated
DUF1512	PF07431.7	gi|568163375|ref|YP_008946716.1|	-	0.033	12.9	0.2	0.035	12.8	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1512)
RVP	PF00077.15	gi|568163375|ref|YP_008946716.1|	-	0.058	13.3	0.0	0.075	12.9	0.0	1.4	1	1	0	1	1	1	0	Retroviral	aspartyl	protease
NAF	PF03822.9	gi|568163375|ref|YP_008946716.1|	-	0.13	11.9	1.4	0.99	9.1	0.0	2.6	3	0	0	3	3	3	0	NAF	domain
Ribosomal_L21e	PF01157.13	gi|568163376|ref|YP_008946717.1|	-	1.4e-27	95.3	1.5	1.5e-27	95.2	1.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L21e
Beta-Casp	PF10996.3	gi|568163377|ref|YP_008946719.1|	-	1.2e-33	115.7	0.0	2.4e-33	114.7	0.0	1.5	1	0	0	1	1	1	1	Beta-Casp	domain
Lactamase_B	PF00753.22	gi|568163377|ref|YP_008946719.1|	-	2.7e-25	89.1	1.1	5e-25	88.2	0.8	1.4	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
RMMBL	PF07521.7	gi|568163377|ref|YP_008946719.1|	-	1.2e-12	47.3	0.1	1.8e-11	43.6	0.0	2.7	3	0	0	3	3	3	1	RNA-metabolising	metallo-beta-lactamase
Lactamase_B_2	PF12706.2	gi|568163377|ref|YP_008946719.1|	-	1.5e-12	47.4	0.1	8.2e-12	45.0	0.1	2.0	2	0	0	2	2	2	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|568163377|ref|YP_008946719.1|	-	3.9e-05	23.4	0.4	0.00014	21.5	0.0	2.2	2	1	0	2	2	2	1	Beta-lactamase	superfamily	domain
KH_2	PF07650.12	gi|568163377|ref|YP_008946719.1|	-	0.0009	18.7	11.3	0.0048	16.4	1.0	3.2	2	1	1	3	3	3	2	KH	domain
KH_1	PF00013.24	gi|568163377|ref|YP_008946719.1|	-	0.0021	17.6	2.5	0.004	16.7	0.0	2.5	2	0	0	2	2	2	1	KH	domain
A-2_8-polyST	PF07388.6	gi|568163377|ref|YP_008946719.1|	-	0.01	14.2	0.9	0.03	12.7	0.9	1.5	2	0	0	2	2	2	0	Alpha-2,8-polysialyltransferase	(POLYST)
Ribosomal_S4e	PF00900.15	gi|568163377|ref|YP_008946719.1|	-	0.028	14.0	0.1	0.1	12.2	0.0	2.0	1	0	0	1	1	1	0	Ribosomal	family	S4e
KH_4	PF13083.1	gi|568163377|ref|YP_008946719.1|	-	0.079	12.6	1.0	0.24	11.0	0.7	1.9	1	0	0	1	1	1	0	KH	domain
Fe-ADH_2	PF13685.1	gi|568163378|ref|YP_008946720.1|	-	1.9e-61	207.5	0.0	2.3e-61	207.2	0.0	1.1	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH	PF00465.14	gi|568163378|ref|YP_008946720.1|	-	2.2e-25	89.0	0.1	7.9e-25	87.2	0.0	1.7	1	1	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
DHQ_synthase	PF01761.15	gi|568163378|ref|YP_008946720.1|	-	1.5e-11	43.6	0.2	1.5e-10	40.4	0.1	2.2	1	1	0	1	1	1	1	3-dehydroquinate	synthase
FKBP_C	PF00254.23	gi|568163379|ref|YP_008946721.1|	-	7.2e-17	61.1	1.0	1.6e-16	60.1	0.2	1.9	1	1	1	2	2	2	1	FKBP-type	peptidyl-prolyl	cis-trans	isomerase
Ribosomal_L37e	PF01907.14	gi|568163380|ref|YP_008946722.1|	-	1.4e-27	95.2	10.1	1.5e-27	95.1	7.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L37e
DZR	PF12773.2	gi|568163380|ref|YP_008946722.1|	-	0.0053	16.5	1.2	0.0061	16.3	0.8	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
HypA	PF01155.14	gi|568163380|ref|YP_008946722.1|	-	0.018	14.7	0.4	0.019	14.6	0.2	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
GCC2_GCC3	PF07699.8	gi|568163380|ref|YP_008946722.1|	-	0.02	14.4	1.3	0.025	14.1	0.9	1.3	1	0	0	1	1	1	0	GCC2	and	GCC3
Stc1	PF12898.2	gi|568163380|ref|YP_008946722.1|	-	0.021	14.8	0.5	0.023	14.7	0.3	1.1	1	0	0	1	1	1	0	Stc1	domain
FYVE_2	PF02318.11	gi|568163380|ref|YP_008946722.1|	-	0.14	12.0	1.4	0.15	11.9	1.0	1.0	1	0	0	1	1	1	0	FYVE-type	zinc	finger
zf-C3HC4	PF00097.20	gi|568163380|ref|YP_008946722.1|	-	0.25	11.0	2.1	0.38	10.4	1.4	1.3	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
zf-ribbon_3	PF13248.1	gi|568163380|ref|YP_008946722.1|	-	0.58	9.4	5.5	6.6	6.0	3.8	2.1	1	1	0	1	1	1	0	zinc-ribbon	domain
Ribosomal_L32p	PF01783.18	gi|568163380|ref|YP_008946722.1|	-	0.65	10.2	5.3	1.1	9.5	2.7	1.8	1	1	1	2	2	2	0	Ribosomal	L32p	protein	family
DNA_RNApol_7kD	PF03604.8	gi|568163380|ref|YP_008946722.1|	-	1.1	8.7	5.6	0.57	9.7	0.3	2.2	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
DUF35_N	PF12172.3	gi|568163380|ref|YP_008946722.1|	-	2.1	8.3	5.6	3.6	7.6	3.9	1.3	1	0	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Spermine_synth	PF01564.12	gi|568163381|ref|YP_008946723.1|	-	1e-58	198.1	0.0	1.3e-58	197.8	0.0	1.1	1	0	0	1	1	1	1	Spermine/spermidine	synthase
Methyltransf_18	PF12847.2	gi|568163381|ref|YP_008946723.1|	-	2.3e-05	24.9	0.0	3.9e-05	24.1	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|568163381|ref|YP_008946723.1|	-	0.00011	21.5	0.0	0.00017	21.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.1	gi|568163381|ref|YP_008946723.1|	-	0.00019	21.0	0.0	0.00027	20.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_30	PF05430.6	gi|568163381|ref|YP_008946723.1|	-	0.00037	20.1	0.0	0.00065	19.3	0.0	1.4	1	0	0	1	1	1	1	S-adenosyl-L-methionine-dependent	methyltransferase
Methyltransf_26	PF13659.1	gi|568163381|ref|YP_008946723.1|	-	0.00077	19.4	0.0	0.0012	18.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|568163381|ref|YP_008946723.1|	-	0.0043	16.1	0.0	0.0066	15.4	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_25	PF13649.1	gi|568163381|ref|YP_008946723.1|	-	0.0045	17.3	0.0	0.014	15.7	0.0	2.0	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|568163381|ref|YP_008946723.1|	-	0.0061	17.0	0.0	0.011	16.1	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|568163381|ref|YP_008946723.1|	-	0.017	15.5	0.0	0.03	14.8	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
AAA_31	PF13614.1	gi|568163381|ref|YP_008946723.1|	-	0.067	13.1	0.0	0.12	12.2	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Methyltransf_2	PF00891.13	gi|568163381|ref|YP_008946723.1|	-	0.074	12.2	0.0	0.1	11.7	0.0	1.3	1	0	0	1	1	1	0	O-methyltransferase
AdoHcyase	PF05221.12	gi|568163382|ref|YP_008946724.1|	-	1.4e-74	250.4	0.2	1.5e-74	250.3	0.2	1.0	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase
AdoHcyase_NAD	PF00670.16	gi|568163382|ref|YP_008946724.1|	-	2.7e-55	186.6	1.2	5.3e-55	185.6	0.8	1.5	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.14	gi|568163382|ref|YP_008946724.1|	-	1.9e-08	33.6	0.2	4.2e-08	32.5	0.2	1.5	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
IlvN	PF07991.7	gi|568163382|ref|YP_008946724.1|	-	7.4e-06	25.4	0.1	1.4e-05	24.4	0.1	1.4	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
TrkA_N	PF02254.13	gi|568163382|ref|YP_008946724.1|	-	0.00054	19.9	0.0	0.0014	18.6	0.0	1.7	1	0	0	1	1	1	1	TrkA-N	domain
THF_DHG_CYH_C	PF02882.14	gi|568163382|ref|YP_008946724.1|	-	0.00055	19.0	0.3	0.0043	16.1	0.2	2.1	1	1	0	1	1	1	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
AlaDh_PNT_C	PF01262.16	gi|568163382|ref|YP_008946724.1|	-	0.0012	18.4	0.8	0.013	15.0	0.2	2.3	1	1	1	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
3HCDH_N	PF02737.13	gi|568163382|ref|YP_008946724.1|	-	0.012	15.2	0.4	0.026	14.1	0.2	1.6	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.12	gi|568163382|ref|YP_008946724.1|	-	0.016	15.6	0.1	0.04	14.3	0.1	1.7	1	0	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
DUF3447	PF11929.3	gi|568163382|ref|YP_008946724.1|	-	0.08	12.7	0.0	0.18	11.5	0.0	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3447)
Pyr_redox	PF00070.22	gi|568163382|ref|YP_008946724.1|	-	0.088	13.2	1.3	0.21	12.0	0.1	2.3	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.9	gi|568163382|ref|YP_008946724.1|	-	0.15	11.9	0.8	0.42	10.4	0.3	1.8	1	1	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
DUF2122	PF09895.4	gi|568163383|ref|YP_008946726.1|	-	1.7e-35	121.4	0.1	2.2e-35	121.0	0.1	1.2	1	0	0	1	1	1	1	RecB-family	nuclease	(DUF2122)
DNA_methylase	PF00145.12	gi|568163384|ref|YP_008946727.1|	-	8e-51	173.1	0.0	6.1e-37	127.4	0.0	2.0	1	1	1	2	2	2	2	C-5	cytosine-specific	DNA	methylase
Methyltransf_26	PF13659.1	gi|568163384|ref|YP_008946727.1|	-	0.0025	17.8	0.0	0.0044	17.0	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|568163384|ref|YP_008946727.1|	-	0.0032	17.0	0.0	0.0056	16.2	0.0	1.3	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
TFIIE_alpha	PF02002.12	gi|568163385|ref|YP_008946728.1|	-	7.1e-22	76.9	6.5	7.1e-22	76.9	4.5	2.0	2	0	0	2	2	2	1	TFIIE	alpha	subunit
Rrf2	PF02082.15	gi|568163385|ref|YP_008946728.1|	-	0.0003	20.8	0.0	0.00047	20.2	0.0	1.4	1	0	0	1	1	1	1	Transcriptional	regulator
Sigma70_r3	PF04539.11	gi|568163385|ref|YP_008946728.1|	-	0.0006	19.6	0.6	0.0026	17.5	0.0	2.1	2	0	0	2	2	2	1	Sigma-70	region	3
HTH_9	PF08221.6	gi|568163385|ref|YP_008946728.1|	-	0.0017	18.1	0.0	0.0047	16.7	0.0	1.8	2	0	0	2	2	2	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|568163385|ref|YP_008946728.1|	-	0.0022	17.8	0.0	0.0041	17.0	0.0	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Phage_rep_org_N	PF09681.5	gi|568163385|ref|YP_008946728.1|	-	0.0034	16.9	0.4	0.018	14.5	0.0	2.1	2	0	0	2	2	2	1	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
HTH_20	PF12840.2	gi|568163385|ref|YP_008946728.1|	-	0.0067	16.2	0.0	0.011	15.4	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|568163385|ref|YP_008946728.1|	-	0.009	15.7	1.5	0.01	15.4	0.2	1.8	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.5	gi|568163385|ref|YP_008946728.1|	-	0.027	14.0	0.0	0.039	13.5	0.0	1.2	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_24	PF13412.1	gi|568163385|ref|YP_008946728.1|	-	0.035	13.4	0.1	0.067	12.5	0.0	1.5	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
DUF2316	PF10078.4	gi|568163385|ref|YP_008946728.1|	-	0.038	13.9	0.0	0.21	11.5	0.0	2.1	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2316)
HrcA_DNA-bdg	PF03444.10	gi|568163385|ref|YP_008946728.1|	-	0.09	12.2	0.2	0.64	9.4	0.0	2.2	2	0	0	2	2	2	0	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
Enkurin	PF13864.1	gi|568163385|ref|YP_008946728.1|	-	0.26	11.5	6.3	2.2	8.5	0.4	2.5	2	1	0	2	2	2	0	Calmodulin-binding
Trm56	PF01994.11	gi|568163386|ref|YP_008946729.1|	-	8.4e-49	164.3	0.1	1.1e-48	164.0	0.1	1.1	1	0	0	1	1	1	1	tRNA	ribose	2'-O-methyltransferase,	aTrm56
SpoU_methylase	PF00588.14	gi|568163386|ref|YP_008946729.1|	-	0.0036	17.1	0.0	0.0052	16.6	0.0	1.1	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
MMR_HSR1	PF01926.18	gi|568163387|ref|YP_008946730.1|	-	2e-19	69.6	1.2	3e-19	69.0	0.1	1.8	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.13	gi|568163387|ref|YP_008946730.1|	-	3e-10	39.5	0.3	9.2e-10	38.0	0.2	1.9	1	1	0	1	1	1	1	Ferrous	iron	transport	protein	B
GTP_EFTU	PF00009.22	gi|568163387|ref|YP_008946730.1|	-	1.1e-09	38.0	1.0	2.4e-06	27.1	0.0	2.3	2	0	0	2	2	2	2	Elongation	factor	Tu	GTP	binding	domain
SRPRB	PF09439.5	gi|568163387|ref|YP_008946730.1|	-	1.5e-06	27.5	0.4	3.2e-06	26.4	0.1	1.8	1	1	0	1	1	1	1	Signal	recognition	particle	receptor	beta	subunit
Miro	PF08477.8	gi|568163387|ref|YP_008946730.1|	-	5e-06	27.0	0.0	1.6e-05	25.4	0.0	1.8	1	0	0	1	1	1	1	Miro-like	protein
GTP-bdg_N	PF13167.1	gi|568163387|ref|YP_008946730.1|	-	4.4e-05	23.5	0.3	0.00011	22.2	0.2	1.6	1	0	0	1	1	1	1	GTP-binding	GTPase	N-terminal
ABC_tran	PF00005.22	gi|568163387|ref|YP_008946730.1|	-	0.00084	19.6	0.3	0.0023	18.2	0.1	1.7	1	1	0	1	1	1	1	ABC	transporter
Arf	PF00025.16	gi|568163387|ref|YP_008946730.1|	-	0.0011	18.2	2.6	0.0068	15.6	1.4	2.5	1	1	0	1	1	1	1	ADP-ribosylation	factor	family
DUF1433	PF07252.6	gi|568163387|ref|YP_008946730.1|	-	0.006	16.7	0.2	0.021	15.0	0.1	1.9	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1433)
ATP_bind_1	PF03029.12	gi|568163387|ref|YP_008946730.1|	-	0.0093	15.5	0.4	0.36	10.3	0.0	2.3	2	0	0	2	2	2	1	Conserved	hypothetical	ATP	binding	protein
Dynamin_N	PF00350.18	gi|568163387|ref|YP_008946730.1|	-	0.011	15.6	2.5	0.25	11.1	0.1	2.7	2	1	1	3	3	2	0	Dynamin	family
AAA_29	PF13555.1	gi|568163387|ref|YP_008946730.1|	-	0.015	14.8	0.0	0.029	13.8	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|568163387|ref|YP_008946730.1|	-	0.022	15.0	5.9	0.022	15.0	4.1	2.3	1	1	1	2	2	2	0	AAA	domain
DUF258	PF03193.11	gi|568163387|ref|YP_008946730.1|	-	0.022	13.9	0.1	0.038	13.1	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
Spore_IV_A	PF09547.5	gi|568163387|ref|YP_008946730.1|	-	0.025	13.2	2.1	0.72	8.4	0.0	2.6	2	1	1	3	3	3	0	Stage	IV	sporulation	protein	A	(spore_IV_A)
AAA_14	PF13173.1	gi|568163387|ref|YP_008946730.1|	-	0.027	14.3	0.7	0.094	12.6	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
MobB	PF03205.9	gi|568163387|ref|YP_008946730.1|	-	0.063	12.9	0.3	0.19	11.4	0.2	1.8	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
PduV-EutP	PF10662.4	gi|568163387|ref|YP_008946730.1|	-	0.08	12.4	1.4	0.7	9.3	0.2	2.4	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
cobW	PF02492.14	gi|568163387|ref|YP_008946730.1|	-	0.29	10.5	3.8	2.5	7.4	0.2	2.7	1	1	1	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
DUF2762	PF10960.3	gi|568163387|ref|YP_008946730.1|	-	1.8	8.3	6.1	6.9	6.4	0.3	3.0	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2762)
HTH_3	PF01381.17	gi|568163388|ref|YP_008946731.1|	-	2e-11	43.5	2.9	3.7e-11	42.7	2.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.2	gi|568163388|ref|YP_008946731.1|	-	6.3e-10	38.9	2.4	2.6e-09	36.9	1.0	2.3	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_31	PF13560.1	gi|568163388|ref|YP_008946731.1|	-	1.6e-09	37.8	0.0	2.5e-09	37.2	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_25	PF13413.1	gi|568163388|ref|YP_008946731.1|	-	3.1e-07	29.8	1.4	6.5e-06	25.6	0.6	2.5	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_37	PF13744.1	gi|568163388|ref|YP_008946731.1|	-	0.001	18.8	0.4	0.0018	18.0	0.3	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|568163388|ref|YP_008946731.1|	-	0.005	16.4	0.4	0.015	14.8	0.2	1.9	1	1	0	1	1	1	1	Homeodomain-like	domain
NMD3	PF04981.8	gi|568163388|ref|YP_008946731.1|	-	0.0052	15.9	1.8	0.0072	15.4	1.1	1.3	1	1	0	1	1	1	1	NMD3	family
DUF4559	PF15112.1	gi|568163388|ref|YP_008946731.1|	-	0.013	14.6	1.8	0.015	14.4	1.3	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4559)
DUF4428	PF14471.1	gi|568163388|ref|YP_008946731.1|	-	0.018	14.7	4.4	0.044	13.5	3.1	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4428)
DZR	PF12773.2	gi|568163388|ref|YP_008946731.1|	-	0.035	13.9	0.4	0.064	13.0	0.3	1.5	1	1	0	1	1	1	0	Double	zinc	ribbon
HTH_6	PF01418.12	gi|568163388|ref|YP_008946731.1|	-	0.04	13.6	0.1	0.076	12.7	0.1	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain,	rpiR	family
HTH_1	PF00126.22	gi|568163388|ref|YP_008946731.1|	-	0.093	12.4	1.1	8.8	6.1	0.0	2.2	2	0	0	2	2	2	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
HTH_11	PF08279.7	gi|568163388|ref|YP_008946731.1|	-	0.13	11.9	0.6	0.39	10.3	0.1	2.0	2	0	0	2	2	2	0	HTH	domain
Relaxase	PF03432.9	gi|568163388|ref|YP_008946731.1|	-	0.14	11.5	3.9	0.19	11.1	2.7	1.1	1	0	0	1	1	1	0	Relaxase/Mobilisation	nuclease	domain
OEP	PF02321.13	gi|568163388|ref|YP_008946731.1|	-	0.16	11.5	3.3	0.24	10.9	2.3	1.1	1	0	0	1	1	1	0	Outer	membrane	efflux	protein
IF-2B	PF01008.12	gi|568163388|ref|YP_008946731.1|	-	0.18	10.7	1.7	0.23	10.4	1.2	1.1	1	0	0	1	1	1	0	Initiation	factor	2	subunit	family
AAA	PF00004.24	gi|568163389|ref|YP_008946732.1|	-	3.5e-43	146.9	0.1	1.2e-42	145.2	0.0	1.9	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_2	PF07724.9	gi|568163389|ref|YP_008946732.1|	-	5.1e-07	29.7	0.0	1.3e-06	28.4	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
AAA_22	PF13401.1	gi|568163389|ref|YP_008946732.1|	-	2.8e-06	27.5	0.2	0.00011	22.3	0.1	2.9	1	1	1	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|568163389|ref|YP_008946732.1|	-	3.9e-06	26.9	0.1	1.7e-05	24.8	0.0	2.0	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_17	PF13207.1	gi|568163389|ref|YP_008946732.1|	-	6.3e-06	27.0	1.4	5.2e-05	24.0	0.3	2.7	2	1	0	2	2	2	1	AAA	domain
AAA_5	PF07728.9	gi|568163389|ref|YP_008946732.1|	-	7.1e-06	25.8	0.1	4e-05	23.3	0.1	2.2	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
RuvB_N	PF05496.7	gi|568163389|ref|YP_008946732.1|	-	3.1e-05	23.1	0.0	6.5e-05	22.0	0.0	1.5	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
Zeta_toxin	PF06414.7	gi|568163389|ref|YP_008946732.1|	-	0.00012	21.1	0.0	0.00023	20.3	0.0	1.5	1	0	0	1	1	1	1	Zeta	toxin
AAA_28	PF13521.1	gi|568163389|ref|YP_008946732.1|	-	0.00015	21.8	0.0	0.00029	20.8	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
DUF815	PF05673.8	gi|568163389|ref|YP_008946732.1|	-	0.00017	20.6	0.0	0.0003	19.7	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
AAA_14	PF13173.1	gi|568163389|ref|YP_008946732.1|	-	0.00053	19.8	0.1	0.0026	17.6	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
IstB_IS21	PF01695.12	gi|568163389|ref|YP_008946732.1|	-	0.00067	19.1	0.1	0.0018	17.6	0.0	1.7	2	0	0	2	2	1	1	IstB-like	ATP	binding	protein
Mg_chelatase	PF01078.16	gi|568163389|ref|YP_008946732.1|	-	0.00076	18.6	0.4	0.0031	16.7	0.1	2.1	2	1	0	2	2	1	1	Magnesium	chelatase,	subunit	ChlI
AAA_19	PF13245.1	gi|568163389|ref|YP_008946732.1|	-	0.00094	18.8	0.1	0.002	17.8	0.0	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_33	PF13671.1	gi|568163389|ref|YP_008946732.1|	-	0.0011	18.8	0.0	0.0033	17.3	0.0	1.8	2	0	0	2	2	1	1	AAA	domain
AAA_25	PF13481.1	gi|568163389|ref|YP_008946732.1|	-	0.0018	17.6	1.3	0.025	13.9	0.1	2.3	1	1	1	2	2	2	1	AAA	domain
TIP49	PF06068.8	gi|568163389|ref|YP_008946732.1|	-	0.0019	16.9	0.0	0.0041	15.9	0.0	1.5	1	0	0	1	1	1	1	TIP49	C-terminus
AAA_24	PF13479.1	gi|568163389|ref|YP_008946732.1|	-	0.0037	16.8	0.0	0.0077	15.8	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
Sigma54_activat	PF00158.21	gi|568163389|ref|YP_008946732.1|	-	0.0078	15.7	0.0	0.04	13.4	0.0	2.1	2	0	0	2	2	2	1	Sigma-54	interaction	domain
AAA_18	PF13238.1	gi|568163389|ref|YP_008946732.1|	-	0.0087	16.3	0.2	0.049	13.9	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
NACHT	PF05729.7	gi|568163389|ref|YP_008946732.1|	-	0.011	15.3	0.1	0.089	12.4	0.0	2.2	2	0	0	2	2	2	0	NACHT	domain
RNA_helicase	PF00910.17	gi|568163389|ref|YP_008946732.1|	-	0.012	15.7	0.0	0.029	14.5	0.0	1.7	1	0	0	1	1	1	0	RNA	helicase
PhoH	PF02562.11	gi|568163389|ref|YP_008946732.1|	-	0.02	14.1	0.0	0.057	12.6	0.0	1.7	1	0	0	1	1	1	0	PhoH-like	protein
KaiC	PF06745.8	gi|568163389|ref|YP_008946732.1|	-	0.02	14.0	0.4	0.044	12.8	0.0	1.8	2	0	0	2	2	1	0	KaiC
XhlA	PF10779.4	gi|568163389|ref|YP_008946732.1|	-	0.02	14.7	2.8	0.02	14.7	2.0	2.1	2	0	0	2	2	1	0	Haemolysin	XhlA
Arch_ATPase	PF01637.13	gi|568163389|ref|YP_008946732.1|	-	0.026	14.2	0.0	0.026	14.2	0.0	2.8	3	1	0	3	3	2	0	Archaeal	ATPase
Guanylate_kin	PF00625.16	gi|568163389|ref|YP_008946732.1|	-	0.027	13.8	0.3	1.2	8.5	0.0	2.8	2	1	0	3	3	3	0	Guanylate	kinase
Bac_DnaA	PF00308.13	gi|568163389|ref|YP_008946732.1|	-	0.03	13.9	0.0	0.12	12.0	0.0	2.0	2	0	0	2	2	2	0	Bacterial	dnaA	protein
NB-ARC	PF00931.17	gi|568163389|ref|YP_008946732.1|	-	0.038	12.8	0.0	0.075	11.8	0.0	1.6	1	0	0	1	1	1	0	NB-ARC	domain
Prefoldin_2	PF01920.15	gi|568163389|ref|YP_008946732.1|	-	0.038	13.7	1.3	0.12	12.1	0.9	1.8	1	0	0	1	1	1	0	Prefoldin	subunit
Parvo_NS1	PF01057.12	gi|568163389|ref|YP_008946732.1|	-	0.042	12.7	0.0	0.077	11.8	0.0	1.3	1	0	0	1	1	1	0	Parvovirus	non-structural	protein	NS1
ABC_tran	PF00005.22	gi|568163389|ref|YP_008946732.1|	-	0.058	13.6	0.0	0.26	11.5	0.0	2.1	2	0	0	2	2	2	0	ABC	transporter
cobW	PF02492.14	gi|568163389|ref|YP_008946732.1|	-	0.058	12.8	0.0	0.1	12.0	0.0	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
Sigma54_activ_2	PF14532.1	gi|568163389|ref|YP_008946732.1|	-	0.061	13.3	0.0	0.21	11.6	0.0	2.0	1	1	0	1	1	1	0	Sigma-54	interaction	domain
ATP-synt_ab	PF00006.20	gi|568163389|ref|YP_008946732.1|	-	0.089	12.2	0.0	0.14	11.6	0.0	1.3	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
DivIC	PF04977.10	gi|568163389|ref|YP_008946732.1|	-	0.096	12.1	1.3	0.26	10.7	0.2	2.2	2	0	0	2	2	2	0	Septum	formation	initiator
CPT	PF07931.7	gi|568163389|ref|YP_008946732.1|	-	0.1	12.1	0.0	0.2	11.2	0.0	1.4	1	0	0	1	1	1	0	Chloramphenicol	phosphotransferase-like	protein
CENP-F_N	PF10481.4	gi|568163389|ref|YP_008946732.1|	-	0.13	11.6	0.2	0.13	11.6	0.1	1.5	2	0	0	2	2	1	0	Cenp-F	N-terminal	domain
DUF1845	PF08900.6	gi|568163389|ref|YP_008946732.1|	-	0.16	11.2	0.4	16	4.6	0.1	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1845)
AAA_23	PF13476.1	gi|568163389|ref|YP_008946732.1|	-	0.24	11.6	0.0	0.24	11.6	0.0	3.2	3	1	0	3	3	3	0	AAA	domain
DUF1192	PF06698.6	gi|568163389|ref|YP_008946732.1|	-	0.59	9.9	3.2	0.98	9.2	0.2	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1192)
Phage_GP20	PF06810.6	gi|568163389|ref|YP_008946732.1|	-	1.8	7.9	8.3	1	8.7	0.7	2.5	3	0	0	3	3	2	0	Phage	minor	structural	protein	GP20
YvrJ	PF12841.2	gi|568163389|ref|YP_008946732.1|	-	3.6	6.9	6.0	3.6	6.9	0.7	3.1	3	0	0	3	3	3	0	YvrJ	protein	family
PUA	PF01472.15	gi|568163390|ref|YP_008946733.1|	-	3.1e-21	74.8	0.8	4.6e-21	74.3	0.6	1.3	1	0	0	1	1	1	1	PUA	domain
TGT_C2	PF14810.1	gi|568163390|ref|YP_008946733.1|	-	2.4e-08	33.7	0.0	4.5e-08	32.8	0.0	1.5	1	0	0	1	1	1	1	Patch-forming	domain	C2	of	tRNA-guanine	transglycosylase
PAC2	PF09754.4	gi|568163391|ref|YP_008946734.1|	-	3.3e-40	138.2	0.0	4.1e-40	137.9	0.0	1.0	1	0	0	1	1	1	1	PAC2	family
TGT	PF01702.13	gi|568163392|ref|YP_008946735.1|	-	2.6e-47	161.1	0.0	4e-47	160.5	0.0	1.3	1	0	0	1	1	1	1	Queuine	tRNA-ribosyltransferase
DUF3912	PF13051.1	gi|568163392|ref|YP_008946735.1|	-	0.096	12.4	0.1	0.35	10.6	0.1	1.9	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3912)
Lsm_C	PF14894.1	gi|568163393|ref|YP_008946736.1|	-	7e-30	102.3	0.3	1.1e-29	101.6	0.2	1.3	1	0	0	1	1	1	1	Lsm	C-terminal
LSM	PF01423.17	gi|568163393|ref|YP_008946736.1|	-	0.0019	17.7	0.8	0.005	16.3	0.4	1.9	2	1	0	2	2	2	1	LSM	domain
SM-ATX	PF14438.1	gi|568163393|ref|YP_008946736.1|	-	0.0068	16.2	0.0	0.014	15.3	0.0	1.5	1	0	0	1	1	1	1	Ataxin	2	SM	domain
Proteasome	PF00227.21	gi|568163395|ref|YP_008946738.1|	-	4.5e-50	169.5	0.2	5.3e-50	169.3	0.1	1.0	1	0	0	1	1	1	1	Proteasome	subunit
tRNA-synt_His	PF13393.1	gi|568163396|ref|YP_008946739.1|	-	9.9e-69	231.7	0.0	1.2e-68	231.4	0.0	1.1	1	0	0	1	1	1	1	Histidyl-tRNA	synthetase
tRNA-synt_2b	PF00587.20	gi|568163396|ref|YP_008946739.1|	-	1.2e-22	80.3	0.2	4.7e-22	78.3	0.1	1.9	2	0	0	2	2	2	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
tRNA-synt_2d	PF01409.15	gi|568163396|ref|YP_008946739.1|	-	5e-10	38.9	0.0	6.6e-08	32.0	0.0	2.5	2	0	0	2	2	2	2	tRNA	synthetases	class	II	core	domain	(F)
HGTP_anticodon	PF03129.15	gi|568163396|ref|YP_008946739.1|	-	1.5e-08	34.4	0.7	4e-08	33.0	0.5	1.7	1	0	0	1	1	1	1	Anticodon	binding	domain
Imm7	PF15588.1	gi|568163396|ref|YP_008946739.1|	-	0.14	12.2	1.5	0.42	10.6	0.1	2.3	3	0	0	3	3	3	0	Immunity	protein	7
tRNA_int_endo	PF01974.12	gi|568163397|ref|YP_008946740.1|	-	1.7e-06	27.7	0.3	4.8e-06	26.2	0.2	1.7	1	1	0	1	1	1	1	tRNA	intron	endonuclease,	catalytic	C-terminal	domain
TFIIE_beta	PF02186.10	gi|568163397|ref|YP_008946740.1|	-	0.021	14.8	0.6	0.029	14.3	0.4	1.3	1	0	0	1	1	1	0	TFIIE	beta	subunit	core	domain
Stk19	PF10494.4	gi|568163397|ref|YP_008946740.1|	-	0.037	13.4	0.6	0.041	13.2	0.4	1.0	1	0	0	1	1	1	0	Serine-threonine	protein	kinase	19
Sen15	PF09631.5	gi|568163397|ref|YP_008946740.1|	-	0.038	14.2	0.1	0.042	14.0	0.1	1.2	1	0	0	1	1	1	0	Sen15	protein
TF_Zn_Ribbon	PF08271.7	gi|568164780|ref|YP_008946741.1|	-	1.2e-11	43.7	4.0	2.4e-11	42.7	2.8	1.5	1	0	0	1	1	1	1	TFIIB	zinc-binding
Ribosomal_S27e	PF01667.12	gi|568164780|ref|YP_008946741.1|	-	0.019	14.5	1.4	0.034	13.6	0.7	1.6	2	0	0	2	2	2	0	Ribosomal	protein	S27
Zn_Tnp_IS91	PF14319.1	gi|568164780|ref|YP_008946741.1|	-	0.12	11.9	0.9	0.24	10.9	0.6	1.5	1	0	0	1	1	1	0	Transposase	zinc-binding	domain
Mga	PF05043.8	gi|568164780|ref|YP_008946741.1|	-	0.19	12.0	6.3	0.043	14.0	1.4	2.2	2	0	0	2	2	2	0	Mga	helix-turn-helix	domain
DUF1492	PF07374.6	gi|568164780|ref|YP_008946741.1|	-	0.53	10.4	6.7	0.28	11.3	1.4	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1492)
PhnA_Zn_Ribbon	PF08274.7	gi|568164780|ref|YP_008946741.1|	-	3	7.7	12.7	5.8	6.7	0.2	3.2	3	0	0	3	3	3	0	PhnA	Zinc-Ribbon
TFIIS_C	PF01096.13	gi|568164780|ref|YP_008946741.1|	-	7.9	6.2	6.0	1.3	8.7	0.1	2.3	2	1	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
Cpn60_TCP1	PF00118.19	gi|568163398|ref|YP_008946742.1|	-	3.5e-165	550.3	13.0	4.1e-165	550.0	9.0	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
DUF87	PF01935.12	gi|568163399|ref|YP_008946743.1|	-	3.5e-38	131.6	1.2	3.5e-38	131.6	0.9	2.3	3	0	0	3	3	3	1	Domain	of	unknown	function	DUF87
AAA_10	PF12846.2	gi|568163399|ref|YP_008946743.1|	-	7.9e-24	84.6	0.8	6.8e-23	81.5	0.6	2.1	1	1	0	1	1	1	1	AAA-like	domain
DUF853	PF05872.7	gi|568163399|ref|YP_008946743.1|	-	2.3e-08	32.8	0.0	0.00059	18.3	0.0	2.1	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
Zot	PF05707.7	gi|568163399|ref|YP_008946743.1|	-	9.4e-08	31.7	0.2	2.2e-06	27.2	0.0	2.5	3	0	0	3	3	3	1	Zonular	occludens	toxin	(Zot)
TrwB_AAD_bind	PF10412.4	gi|568163399|ref|YP_008946743.1|	-	1.1e-07	30.8	0.0	4.3e-05	22.3	0.0	2.6	3	0	0	3	3	3	2	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
T4SS-DNA_transf	PF02534.9	gi|568163399|ref|YP_008946743.1|	-	2.1e-07	29.8	0.5	0.00078	18.1	0.0	2.8	3	0	0	3	3	3	2	Type	IV	secretory	system	Conjugative	DNA	transfer
TraG-D_C	PF12696.2	gi|568163399|ref|YP_008946743.1|	-	0.0012	18.7	1.1	0.0042	16.9	0.1	2.3	2	0	0	2	2	2	1	TraM	recognition	site	of	TraD	and	TraG
DEAD	PF00270.24	gi|568163399|ref|YP_008946743.1|	-	0.0023	17.4	0.3	2.9	7.3	0.0	3.2	3	1	0	3	3	3	2	DEAD/DEAH	box	helicase
AAA_22	PF13401.1	gi|568163399|ref|YP_008946743.1|	-	0.0033	17.5	1.1	2.7	8.1	0.0	2.8	2	1	0	2	2	2	2	AAA	domain
CbiA	PF01656.18	gi|568163399|ref|YP_008946743.1|	-	0.014	14.7	1.4	0.095	12.0	0.5	2.5	2	1	0	2	2	2	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_17	PF13207.1	gi|568163399|ref|YP_008946743.1|	-	0.017	15.9	1.4	0.2	12.4	0.9	2.7	1	1	0	1	1	1	0	AAA	domain
AAA_18	PF13238.1	gi|568163399|ref|YP_008946743.1|	-	0.03	14.6	2.3	0.048	13.9	0.1	2.5	2	1	0	2	2	2	0	AAA	domain
Zeta_toxin	PF06414.7	gi|568163399|ref|YP_008946743.1|	-	0.056	12.5	0.0	0.31	10.0	0.0	2.0	2	0	0	2	2	2	0	Zeta	toxin
IPT	PF01745.11	gi|568163399|ref|YP_008946743.1|	-	0.087	11.9	0.0	0.27	10.3	0.0	1.8	1	0	0	1	1	1	0	Isopentenyl	transferase
ResIII	PF04851.10	gi|568163399|ref|YP_008946743.1|	-	0.61	9.8	4.3	1.2	8.9	0.4	2.7	2	1	1	3	3	3	0	Type	III	restriction	enzyme,	res	subunit
Urm1	PF09138.6	gi|568163400|ref|YP_008946745.1|	-	2.9e-06	27.2	0.2	3.3e-06	27.1	0.2	1.1	1	0	0	1	1	1	1	Urm1	(Ubiquitin	related	modifier)
ThiS	PF02597.15	gi|568163400|ref|YP_008946745.1|	-	3.3e-06	27.4	0.0	3.6e-06	27.3	0.0	1.0	1	0	0	1	1	1	1	ThiS	family
Ribosomal_S17e	PF00833.13	gi|568163401|ref|YP_008946746.1|	-	5.1e-16	58.5	1.4	5.4e-16	58.4	0.9	1.0	1	0	0	1	1	1	1	Ribosomal	S17
DUF4419	PF14388.1	gi|568163401|ref|YP_008946746.1|	-	0.056	12.6	0.1	0.059	12.5	0.1	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4419)
LEDGF	PF11467.3	gi|568163401|ref|YP_008946746.1|	-	0.076	12.7	1.3	0.096	12.4	0.3	1.6	1	1	1	2	2	2	0	Lens	epithelium-derived	growth	factor	(LEDGF)
DUF2797	PF10977.3	gi|568163401|ref|YP_008946746.1|	-	0.09	12.3	1.0	0.099	12.2	0.7	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2797)
YtxH	PF12732.2	gi|568163401|ref|YP_008946746.1|	-	0.84	10.0	5.9	2.9	8.3	4.1	1.9	1	1	0	1	1	1	0	YtxH-like	protein
FBPase_3	PF01950.11	gi|568163402|ref|YP_008946747.1|	-	1.3e-181	603.4	0.0	1.5e-181	603.2	0.0	1.0	1	0	0	1	1	1	1	Fructose-1,6-bisphosphatase
ABC_tran	PF00005.22	gi|568163403|ref|YP_008946748.1|	-	3.3e-37	127.8	0.0	9.2e-19	68.1	0.0	2.4	2	0	0	2	2	2	2	ABC	transporter
AAA_21	PF13304.1	gi|568163403|ref|YP_008946748.1|	-	1.4e-12	48.1	14.7	0.00058	19.9	3.9	4.5	3	2	0	4	4	3	3	AAA	domain
RLI	PF04068.10	gi|568163403|ref|YP_008946748.1|	-	1.6e-12	46.7	2.3	3.8e-12	45.5	1.6	1.7	1	0	0	1	1	1	1	Possible	Fer4-like	domain	in	RNase	L	inhibitor,	RLI
SMC_N	PF02463.14	gi|568163403|ref|YP_008946748.1|	-	9.2e-11	41.3	6.0	0.0017	17.6	1.9	4.2	3	1	0	3	3	3	2	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|568163403|ref|YP_008946748.1|	-	1.3e-08	34.3	4.2	0.0057	15.7	0.8	3.9	4	0	0	4	4	4	3	AAA	ATPase	domain
Fer4	PF00037.22	gi|568163403|ref|YP_008946748.1|	-	3.3e-07	29.6	6.4	3.3e-07	29.6	4.5	2.6	3	0	0	3	3	3	1	4Fe-4S	binding	domain
AAA_17	PF13207.1	gi|568163403|ref|YP_008946748.1|	-	2.6e-06	28.2	3.8	0.003	18.3	0.1	3.8	2	2	0	2	2	2	1	AAA	domain
AAA_14	PF13173.1	gi|568163403|ref|YP_008946748.1|	-	5.2e-06	26.3	0.7	0.11	12.4	0.0	2.8	2	1	0	2	2	2	2	AAA	domain
AAA_23	PF13476.1	gi|568163403|ref|YP_008946748.1|	-	1.3e-05	25.6	3.6	0.072	13.4	0.2	2.4	2	0	0	2	2	2	2	AAA	domain
MobB	PF03205.9	gi|568163403|ref|YP_008946748.1|	-	3e-05	23.7	0.6	0.0082	15.8	0.0	2.8	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Fer4_7	PF12838.2	gi|568163403|ref|YP_008946748.1|	-	5.5e-05	23.4	5.7	0.00024	21.4	4.3	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
AAA_18	PF13238.1	gi|568163403|ref|YP_008946748.1|	-	0.00018	21.8	3.3	0.37	11.1	0.1	3.3	2	2	0	2	2	2	2	AAA	domain
Fer4_21	PF14697.1	gi|568163403|ref|YP_008946748.1|	-	0.00027	20.7	8.2	0.00047	19.9	5.7	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|568163403|ref|YP_008946748.1|	-	0.00029	20.5	3.6	0.00029	20.5	2.5	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|568163403|ref|YP_008946748.1|	-	0.0003	20.5	13.8	0.00036	20.2	2.8	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
AAA_16	PF13191.1	gi|568163403|ref|YP_008946748.1|	-	0.00031	20.8	0.2	0.031	14.2	0.0	2.6	2	2	0	2	2	2	1	AAA	ATPase	domain
RNA_helicase	PF00910.17	gi|568163403|ref|YP_008946748.1|	-	0.00054	20.0	0.0	0.2	11.8	0.0	2.5	2	0	0	2	2	2	1	RNA	helicase
Fer4_10	PF13237.1	gi|568163403|ref|YP_008946748.1|	-	0.00098	18.8	2.1	0.00098	18.8	1.4	2.3	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
MMR_HSR1	PF01926.18	gi|568163403|ref|YP_008946748.1|	-	0.0018	18.2	1.0	1.6	8.7	0.0	3.0	2	1	0	2	2	2	1	50S	ribosome-binding	GTPase
AAA_29	PF13555.1	gi|568163403|ref|YP_008946748.1|	-	0.0018	17.7	0.9	2.1	7.9	0.2	2.5	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
Miro	PF08477.8	gi|568163403|ref|YP_008946748.1|	-	0.002	18.6	0.3	4.2	7.8	0.0	3.1	2	1	0	2	2	2	0	Miro-like	protein
Fer4_16	PF13484.1	gi|568163403|ref|YP_008946748.1|	-	0.0042	17.7	0.1	0.0042	17.7	0.1	2.3	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
NACHT	PF05729.7	gi|568163403|ref|YP_008946748.1|	-	0.0043	16.7	0.1	0.016	14.8	0.0	2.0	2	0	0	2	2	1	1	NACHT	domain
AAA_22	PF13401.1	gi|568163403|ref|YP_008946748.1|	-	0.005	16.9	0.7	0.075	13.1	0.0	3.0	2	2	1	3	3	3	1	AAA	domain
DUF258	PF03193.11	gi|568163403|ref|YP_008946748.1|	-	0.0051	16.0	0.2	0.42	9.7	0.0	2.6	2	0	0	2	2	2	1	Protein	of	unknown	function,	DUF258
Arch_ATPase	PF01637.13	gi|568163403|ref|YP_008946748.1|	-	0.0054	16.4	3.5	0.23	11.1	0.2	2.8	2	1	0	2	2	2	1	Archaeal	ATPase
Rad17	PF03215.10	gi|568163403|ref|YP_008946748.1|	-	0.006	15.3	0.1	1.1	7.8	0.0	2.6	2	1	0	2	2	2	1	Rad17	cell	cycle	checkpoint	protein
AAA	PF00004.24	gi|568163403|ref|YP_008946748.1|	-	0.0067	16.6	0.0	0.22	11.6	0.0	2.7	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_33	PF13671.1	gi|568163403|ref|YP_008946748.1|	-	0.011	15.6	0.1	0.98	9.2	0.0	3.1	2	1	0	2	2	2	0	AAA	domain
Fer4_3	PF12798.2	gi|568163403|ref|YP_008946748.1|	-	0.012	16.1	3.5	0.012	16.1	2.4	2.1	2	0	0	2	2	1	0	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|568163403|ref|YP_008946748.1|	-	0.014	15.6	8.0	0.05	13.8	5.7	1.8	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
PRK	PF00485.13	gi|568163403|ref|YP_008946748.1|	-	0.016	14.7	0.0	0.65	9.5	0.0	2.3	2	0	0	2	2	2	0	Phosphoribulokinase	/	Uridine	kinase	family
T2SE	PF00437.15	gi|568163403|ref|YP_008946748.1|	-	0.022	13.6	0.5	0.74	8.6	0.1	2.4	2	1	0	2	2	2	0	Type	II/IV	secretion	system	protein
AAA_13	PF13166.1	gi|568163403|ref|YP_008946748.1|	-	0.023	13.2	1.2	11	4.2	0.0	3.1	3	0	0	3	3	3	0	AAA	domain
Spore_IV_A	PF09547.5	gi|568163403|ref|YP_008946748.1|	-	0.033	12.8	0.2	3.8	6.0	0.0	2.2	2	0	0	2	2	2	0	Stage	IV	sporulation	protein	A	(spore_IV_A)
SbcCD_C	PF13558.1	gi|568163403|ref|YP_008946748.1|	-	0.035	14.0	0.1	15	5.5	0.0	3.2	2	2	0	2	2	2	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_28	PF13521.1	gi|568163403|ref|YP_008946748.1|	-	0.037	13.9	0.0	9.2	6.2	0.0	2.5	2	0	0	2	2	2	0	AAA	domain
AAA_25	PF13481.1	gi|568163403|ref|YP_008946748.1|	-	0.053	12.9	1.7	0.68	9.3	0.0	2.7	3	0	0	3	3	2	0	AAA	domain
Dynamin_N	PF00350.18	gi|568163403|ref|YP_008946748.1|	-	0.063	13.0	0.1	1.2	8.8	0.1	2.4	2	0	0	2	2	2	0	Dynamin	family
ArgK	PF03308.11	gi|568163403|ref|YP_008946748.1|	-	0.069	11.9	0.4	5.8	5.6	0.0	2.3	2	0	0	2	2	2	0	ArgK	protein
UPF0079	PF02367.12	gi|568163403|ref|YP_008946748.1|	-	0.091	12.3	0.2	0.59	9.7	0.0	2.2	2	0	0	2	2	2	0	Uncharacterised	P-loop	hydrolase	UPF0079
PduV-EutP	PF10662.4	gi|568163403|ref|YP_008946748.1|	-	0.18	11.3	1.6	9.2	5.7	0.0	3.6	4	1	0	4	4	3	0	Ethanolamine	utilisation	-	propanediol	utilisation
Fer4_8	PF13183.1	gi|568163403|ref|YP_008946748.1|	-	0.22	11.6	4.5	0.063	13.3	0.7	1.6	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
NB-ARC	PF00931.17	gi|568163403|ref|YP_008946748.1|	-	0.26	10.0	1.8	0.39	9.5	0.0	1.9	2	0	0	2	2	2	0	NB-ARC	domain
AAA_30	PF13604.1	gi|568163403|ref|YP_008946748.1|	-	0.31	10.5	0.3	17	4.9	0.0	2.8	4	0	0	4	4	2	0	AAA	domain
Fer4_4	PF12800.2	gi|568163403|ref|YP_008946748.1|	-	0.33	11.3	11.8	0.11	12.9	1.9	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|568163403|ref|YP_008946748.1|	-	1.3	9.4	6.4	0.36	11.2	0.9	2.2	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|568163403|ref|YP_008946748.1|	-	2.1	8.8	9.3	0.58	10.6	3.1	2.3	1	1	0	2	2	2	0	4Fe-4S	dicluster	domain
MFS_1	PF07690.11	gi|568163405|ref|YP_008946750.1|	-	1.7e-28	99.3	69.8	3.1e-22	78.7	29.9	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|568163405|ref|YP_008946750.1|	-	7.7e-24	84.0	40.0	1.3e-17	63.5	8.8	2.0	1	1	1	2	2	2	2	Sugar	(and	other)	transporter
MFS_2	PF13347.1	gi|568163405|ref|YP_008946750.1|	-	1.7e-08	33.2	25.0	1.5e-05	23.5	11.3	3.0	2	1	0	3	3	3	3	MFS/sugar	transport	protein
Ribosomal_S10	PF00338.17	gi|568163406|ref|YP_008946751.1|	-	5.5e-32	109.4	0.1	6.1e-32	109.3	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S10p/S20e
GTP_EFTU	PF00009.22	gi|568163407|ref|YP_008946752.1|	-	5.2e-55	185.8	0.1	7.6e-55	185.2	0.0	1.2	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D3	PF03143.12	gi|568163407|ref|YP_008946752.1|	-	2.5e-29	101.3	0.1	8e-29	99.7	0.1	1.9	1	0	0	1	1	1	1	Elongation	factor	Tu	C-terminal	domain
GTP_EFTU_D2	PF03144.20	gi|568163407|ref|YP_008946752.1|	-	7e-19	67.7	5.9	3.9e-18	65.3	2.6	2.6	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
GTP_EFTU_D4	PF14578.1	gi|568163407|ref|YP_008946752.1|	-	9.3e-08	31.5	4.4	2.4e-07	30.2	3.0	1.7	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	4
MMR_HSR1	PF01926.18	gi|568163407|ref|YP_008946752.1|	-	3.6e-07	30.1	0.0	1.2e-06	28.4	0.0	2.0	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
Miro	PF08477.8	gi|568163407|ref|YP_008946752.1|	-	0.00039	20.9	0.1	0.0027	18.1	0.1	2.3	1	1	0	1	1	1	1	Miro-like	protein
SRPRB	PF09439.5	gi|568163407|ref|YP_008946752.1|	-	0.0012	18.1	0.1	0.66	9.1	0.0	2.3	1	1	1	2	2	2	2	Signal	recognition	particle	receptor	beta	subunit
Septin	PF00735.13	gi|568163407|ref|YP_008946752.1|	-	0.002	17.2	0.0	0.0069	15.4	0.0	1.8	1	1	0	1	1	1	1	Septin
Gtr1_RagA	PF04670.7	gi|568163407|ref|YP_008946752.1|	-	0.0099	15.0	0.1	0.018	14.2	0.1	1.3	1	0	0	1	1	1	1	Gtr1/RagA	G	protein	conserved	region
Dynamin_N	PF00350.18	gi|568163407|ref|YP_008946752.1|	-	0.026	14.3	0.1	0.84	9.4	0.0	2.5	1	1	1	2	2	2	0	Dynamin	family
cobW	PF02492.14	gi|568163407|ref|YP_008946752.1|	-	0.049	13.0	0.4	0.27	10.6	0.1	2.1	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
DUF552	PF04472.7	gi|568163407|ref|YP_008946752.1|	-	0.086	12.7	0.3	24	4.9	0.0	2.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF552)
Ribosomal_S7	PF00177.16	gi|568163408|ref|YP_008946753.1|	-	5.7e-47	159.0	0.5	6.8e-47	158.7	0.3	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S7p/S5e
DNase-RNase	PF02577.9	gi|568163409|ref|YP_008946754.1|	-	1.2e-06	27.8	0.2	2.3e-06	26.8	0.1	1.4	1	0	0	1	1	1	1	Bifunctional	nuclease
Ribosom_S12_S23	PF00164.20	gi|568163410|ref|YP_008946755.1|	-	6.8e-41	138.5	0.1	7.7e-41	138.3	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S12/S23
KH_2	PF07650.12	gi|568163411|ref|YP_008946756.1|	-	1.4e-19	69.4	5.2	8.7e-14	50.8	0.3	2.1	1	1	1	2	2	2	2	KH	domain
KH_4	PF13083.1	gi|568163411|ref|YP_008946756.1|	-	2.8e-12	46.0	1.9	3.7e-07	29.6	0.1	2.2	2	0	0	2	2	2	2	KH	domain
KH_5	PF13184.1	gi|568163411|ref|YP_008946756.1|	-	2.1e-11	43.4	4.1	4.3e-11	42.4	0.7	2.1	2	0	0	2	2	2	1	NusA-like	KH	domain
KH_1	PF00013.24	gi|568163411|ref|YP_008946756.1|	-	4.1e-06	26.3	1.9	0.0095	15.5	0.2	2.5	2	1	0	2	2	2	2	KH	domain
Ribosomal_L7Ae	PF01248.21	gi|568163412|ref|YP_008946757.1|	-	1e-19	69.8	0.0	1.1e-19	69.6	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
RNA_pol_Rpb1_5	PF04998.12	gi|568163413|ref|YP_008946758.1|	-	6.9e-52	176.4	3.6	8.9e-52	176.0	2.5	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	5
Beta-Casp	PF10996.3	gi|568163413|ref|YP_008946758.1|	-	0.085	12.7	0.1	0.26	11.2	0.1	1.8	1	1	0	1	1	1	0	Beta-Casp	domain
RNA_pol_Rpb1_1	PF04997.7	gi|568163414|ref|YP_008946759.1|	-	1.9e-91	306.8	0.2	5e-90	302.1	0.1	2.1	1	1	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	1
RNA_pol_Rpb1_2	PF00623.15	gi|568163414|ref|YP_008946759.1|	-	1.3e-69	233.3	0.0	2.5e-69	232.4	0.0	1.5	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	2
RNA_pol_Rpb1_3	PF04983.13	gi|568163414|ref|YP_008946759.1|	-	1e-33	116.3	0.0	1.7e-33	115.5	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	3
RNA_pol_Rpb1_4	PF05000.12	gi|568163414|ref|YP_008946759.1|	-	3.1e-29	100.8	0.0	6.3e-29	99.8	0.0	1.5	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	4
RNA_pol_Rpb1_5	PF04998.12	gi|568163414|ref|YP_008946759.1|	-	2.4e-27	95.9	0.0	4.4e-27	95.0	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	5
zf-ribbon_3	PF13248.1	gi|568163414|ref|YP_008946759.1|	-	0.015	14.5	4.1	3.6	6.9	0.1	3.3	3	0	0	3	3	3	0	zinc-ribbon	domain
CpXC	PF14353.1	gi|568163414|ref|YP_008946759.1|	-	0.078	12.9	1.3	0.15	11.9	0.1	2.1	1	1	1	2	2	2	0	CpXC	protein
HTH_17	PF12728.2	gi|568163414|ref|YP_008946759.1|	-	0.25	11.6	2.0	2.9	8.1	0.1	2.8	2	0	0	2	2	2	0	Helix-turn-helix	domain
UPF0547	PF10571.4	gi|568163414|ref|YP_008946759.1|	-	0.35	10.5	2.9	2.2	8.0	0.2	2.6	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zf-ISL3	PF14690.1	gi|568163414|ref|YP_008946759.1|	-	3.7	7.6	7.1	2.6	8.1	0.1	3.2	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-FPG_IleRS	PF06827.9	gi|568163414|ref|YP_008946759.1|	-	6.2	6.5	8.5	0.32	10.6	0.1	3.0	3	0	0	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
RNA_pol_Rpb2_6	PF00562.23	gi|568163415|ref|YP_008946760.1|	-	1.7e-123	412.1	0.1	2.5e-123	411.6	0.1	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	6
RNA_pol_Rpb2_1	PF04563.10	gi|568163415|ref|YP_008946760.1|	-	3.2e-63	212.3	0.0	6.1e-63	211.4	0.0	1.5	1	0	0	1	1	1	1	RNA	polymerase	beta	subunit
RNA_pol_Rpb2_2	PF04561.9	gi|568163415|ref|YP_008946760.1|	-	3.2e-44	150.6	0.0	5.7e-44	149.8	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	2
RNA_pol_Rpb2_7	PF04560.15	gi|568163415|ref|YP_008946760.1|	-	4.3e-27	94.1	0.0	1.1e-26	92.9	0.0	1.7	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	7
RNA_pol_Rpb2_3	PF04565.11	gi|568163415|ref|YP_008946760.1|	-	5.5e-26	90.1	0.0	1.2e-25	89.0	0.0	1.6	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	3
RNA_pol_Rpb2_4	PF04566.8	gi|568163415|ref|YP_008946760.1|	-	2e-20	72.3	0.2	4.6e-20	71.1	0.1	1.7	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	4
RNA_pol_Rpb2_5	PF04567.12	gi|568163415|ref|YP_008946760.1|	-	5.5e-15	55.0	0.2	1.1e-14	54.1	0.2	1.5	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	5
Spherulin4	PF12138.3	gi|568163415|ref|YP_008946760.1|	-	0.085	12.2	0.1	0.15	11.4	0.1	1.3	1	0	0	1	1	1	0	Spherulation-specific	family	4
DUF2082	PF09855.4	gi|568163415|ref|YP_008946760.1|	-	0.21	11.4	0.2	13	5.7	0.0	2.4	2	0	0	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
DUF1610	PF07754.6	gi|568163415|ref|YP_008946760.1|	-	0.61	10.2	1.5	1.4	9.1	0.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
RNA_pol_Rpb5_C	PF01191.14	gi|568163416|ref|YP_008946761.1|	-	3.9e-32	109.6	0.1	4.4e-32	109.5	0.0	1.0	1	0	0	1	1	1	1	RNA	polymerase	Rpb5,	C-terminal	domain
GTP_EFTU	PF00009.22	gi|568163417|ref|YP_008946762.1|	-	3.3e-34	117.9	0.2	1.1e-33	116.2	0.0	1.9	2	0	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D4	PF14578.1	gi|568163417|ref|YP_008946762.1|	-	6.3e-24	83.4	5.5	2.3e-23	81.6	3.8	2.1	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	4
IF-2	PF11987.3	gi|568163417|ref|YP_008946762.1|	-	2.9e-18	65.7	2.0	8e-18	64.3	1.4	1.8	1	0	0	1	1	1	1	Translation-initiation	factor	2
GTP_EFTU_D2	PF03144.20	gi|568163417|ref|YP_008946762.1|	-	5.8e-11	42.3	1.4	2e-09	37.4	0.0	3.0	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
Miro	PF08477.8	gi|568163417|ref|YP_008946762.1|	-	2.6e-07	31.1	0.1	9.4e-07	29.3	0.1	2.1	1	0	0	1	1	1	1	Miro-like	protein
MMR_HSR1	PF01926.18	gi|568163417|ref|YP_008946762.1|	-	3e-07	30.4	0.1	1.1e-06	28.5	0.1	2.1	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
Ras	PF00071.17	gi|568163417|ref|YP_008946762.1|	-	0.00059	19.2	0.2	0.0048	16.3	0.0	2.7	2	1	0	2	2	2	1	Ras	family
Dynamin_N	PF00350.18	gi|568163417|ref|YP_008946762.1|	-	0.00076	19.3	0.1	0.053	13.3	0.0	3.0	2	0	0	2	2	2	1	Dynamin	family
Arf	PF00025.16	gi|568163417|ref|YP_008946762.1|	-	0.0017	17.5	0.4	1.7	7.8	0.0	3.0	2	1	0	2	2	2	2	ADP-ribosylation	factor	family
ATP_bind_1	PF03029.12	gi|568163417|ref|YP_008946762.1|	-	0.0033	17.0	0.0	0.018	14.6	0.0	2.1	1	1	0	2	2	2	1	Conserved	hypothetical	ATP	binding	protein
NusG	PF02357.14	gi|568163417|ref|YP_008946762.1|	-	0.0059	16.8	0.3	8.3	6.7	0.0	3.5	3	0	0	3	3	3	1	Transcription	termination	factor	nusG
PduV-EutP	PF10662.4	gi|568163417|ref|YP_008946762.1|	-	0.014	14.8	0.3	1	8.8	0.0	3.8	4	1	1	5	5	5	0	Ethanolamine	utilisation	-	propanediol	utilisation
DUF367	PF04034.8	gi|568163417|ref|YP_008946762.1|	-	0.077	12.6	0.1	0.46	10.1	0.0	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF367)
AAA_23	PF13476.1	gi|568163417|ref|YP_008946762.1|	-	0.27	11.5	4.2	1.8	8.8	2.7	2.5	1	1	0	1	1	1	0	AAA	domain
NDK	PF00334.14	gi|568163418|ref|YP_008946763.1|	-	2.2e-57	192.6	0.1	2.7e-57	192.3	0.0	1.0	1	0	0	1	1	1	1	Nucleoside	diphosphate	kinase
Ribosomal_L24e	PF01246.15	gi|568163419|ref|YP_008946764.1|	-	3.3e-22	78.1	0.3	3.7e-22	77.9	0.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L24e
zf-FCS	PF06467.9	gi|568163419|ref|YP_008946764.1|	-	1e-06	28.2	1.3	1.5e-06	27.7	0.9	1.3	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
DUF581	PF04570.9	gi|568163419|ref|YP_008946764.1|	-	0.00041	19.5	0.7	0.00077	18.7	0.5	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF581)
zf-MYND	PF01753.13	gi|568163419|ref|YP_008946764.1|	-	0.0032	17.2	0.0	0.0052	16.6	0.0	1.3	1	1	0	1	1	1	1	MYND	finger
YHS	PF04945.8	gi|568163419|ref|YP_008946764.1|	-	0.0068	16.2	0.2	0.012	15.4	0.1	1.4	1	0	0	1	1	1	1	YHS	domain
DUF2175	PF09943.4	gi|568163419|ref|YP_008946764.1|	-	0.03	14.3	0.1	0.031	14.3	0.0	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2175)
zf-C4_ClpX	PF06689.8	gi|568163419|ref|YP_008946764.1|	-	0.059	12.8	0.2	0.059	12.8	0.2	1.6	2	0	0	2	2	2	0	ClpX	C4-type	zinc	finger
DUF2116	PF09889.4	gi|568163419|ref|YP_008946764.1|	-	0.14	11.9	0.6	2.7	7.8	0.1	2.0	2	0	0	2	2	2	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
Arc_trans_TRASH	PF08394.5	gi|568163419|ref|YP_008946764.1|	-	0.15	12.2	0.7	0.42	10.8	0.4	1.8	1	1	0	1	1	1	0	Archaeal	TRASH	domain
DUF329	PF03884.9	gi|568163419|ref|YP_008946764.1|	-	1.1	8.8	4.3	7.4	6.2	3.0	2.0	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF329)
DUF2256	PF10013.4	gi|568163419|ref|YP_008946764.1|	-	3.6	7.4	6.7	3.9	7.2	0.2	2.7	3	0	0	3	3	3	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2256)
Ribosomal_S28e	PF01200.13	gi|568163420|ref|YP_008946765.1|	-	7.3e-32	108.9	1.9	8.2e-32	108.7	1.3	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S28e
KOW	PF00467.24	gi|568163420|ref|YP_008946765.1|	-	0.015	14.9	0.7	0.6	9.9	0.1	2.7	2	1	0	2	2	2	0	KOW	motif
UPRTase	PF14681.1	gi|568163421|ref|YP_008946766.1|	-	3.4e-57	193.0	0.0	3.9e-57	192.8	0.0	1.0	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
Pribosyltran	PF00156.22	gi|568163421|ref|YP_008946766.1|	-	1.9e-09	37.2	0.2	3.1e-09	36.6	0.1	1.3	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
PRTase_2	PF15609.1	gi|568163421|ref|YP_008946766.1|	-	0.12	11.6	0.0	0.19	11.0	0.0	1.4	1	1	0	1	1	1	0	Phosphoribosyl	transferase
GatB_N	PF02934.10	gi|568163422|ref|YP_008946767.1|	-	2.3e-106	354.8	0.0	3.3e-106	354.3	0.0	1.2	1	0	0	1	1	1	1	GatB/GatE	catalytic	domain
GatB_Yqey	PF02637.13	gi|568163422|ref|YP_008946767.1|	-	5.8e-40	136.4	6.8	5.8e-40	136.4	4.7	2.2	2	0	0	2	2	2	1	GatB	domain
Pribosyltran	PF00156.22	gi|568163423|ref|YP_008946768.1|	-	1e-21	76.9	0.5	1.9e-21	76.1	0.4	1.4	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.1	gi|568163423|ref|YP_008946768.1|	-	0.052	12.7	0.0	0.078	12.1	0.0	1.3	1	0	0	1	1	1	0	Uracil	phosphoribosyltransferase
Radical_SAM	PF04055.16	gi|568163424|ref|YP_008946770.1|	-	4.6e-19	69.1	0.0	4.6e-19	69.1	0.0	2.0	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|568163424|ref|YP_008946770.1|	-	1e-07	31.9	1.0	2.3e-07	30.8	0.0	2.1	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|568163424|ref|YP_008946770.1|	-	1.9e-06	28.0	0.9	2.9e-06	27.4	0.0	1.8	1	1	1	2	2	2	1	4Fe-4S	single	cluster	domain
Peptidase_S13	PF02113.10	gi|568163424|ref|YP_008946770.1|	-	0.042	12.3	0.0	0.18	10.2	0.0	1.9	3	0	0	3	3	3	0	D-Ala-D-Ala	carboxypeptidase	3	(S13)	family
AIRS	PF00586.19	gi|568163425|ref|YP_008946771.1|	-	3e-13	49.8	0.0	5.1e-13	49.0	0.0	1.3	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
AIRS_C	PF02769.17	gi|568163425|ref|YP_008946771.1|	-	6.7e-06	26.1	0.0	9.5e-06	25.6	0.0	1.2	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
Lyase_1	PF00206.15	gi|568163426|ref|YP_008946772.1|	-	1.4e-48	165.7	0.0	2.1e-48	165.1	0.0	1.2	1	0	0	1	1	1	1	Lyase
ADSL_C	PF10397.4	gi|568163426|ref|YP_008946772.1|	-	1.7e-16	59.9	0.1	6.3e-16	58.1	0.0	2.0	2	0	0	2	2	2	1	Adenylosuccinate	lyase	C-terminus
ASL_C	PF08328.6	gi|568163426|ref|YP_008946772.1|	-	0.00059	19.6	0.7	0.0017	18.1	0.5	1.9	1	0	0	1	1	1	1	Adenylosuccinate	lyase	C-terminal
ASL_C2	PF14698.1	gi|568163426|ref|YP_008946772.1|	-	0.11	12.6	0.0	0.38	10.8	0.0	1.9	2	0	0	2	2	2	0	Argininosuccinate	lyase	C-terminal
DUF1297	PF06973.7	gi|568163427|ref|YP_008946773.1|	-	9.1e-74	246.8	0.0	1.3e-73	246.3	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1297)
DUF1246	PF06849.7	gi|568163427|ref|YP_008946773.1|	-	3e-40	136.8	0.0	4.6e-40	136.2	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1246)
ATP-grasp_4	PF13535.1	gi|568163427|ref|YP_008946773.1|	-	0.0027	17.4	0.0	0.011	15.5	0.0	1.9	1	1	0	1	1	1	1	ATP-grasp	domain
GARS_A	PF01071.14	gi|568163427|ref|YP_008946773.1|	-	0.073	12.6	0.0	0.14	11.7	0.0	1.4	1	0	0	1	1	1	0	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
DUF1297	PF06973.7	gi|568163428|ref|YP_008946774.1|	-	7.1e-80	266.7	0.0	9.2e-80	266.3	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1297)
DUF1246	PF06849.7	gi|568163428|ref|YP_008946774.1|	-	3.7e-46	155.9	0.0	5.3e-46	155.4	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1246)
ATP-grasp_4	PF13535.1	gi|568163428|ref|YP_008946774.1|	-	1.8e-08	34.3	0.0	4.7e-07	29.7	0.0	2.1	1	1	0	1	1	1	1	ATP-grasp	domain
Adenylsucc_synt	PF00709.16	gi|568163429|ref|YP_008946775.1|	-	1.2e-78	264.6	0.3	1.5e-39	135.8	0.0	3.0	1	1	2	3	3	3	3	Adenylosuccinate	synthetase
Pyr_redox_2	PF07992.9	gi|568163430|ref|YP_008946776.1|	-	2.6e-10	40.5	0.4	0.0018	18.2	0.0	3.2	3	0	0	3	3	3	3	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|568163430|ref|YP_008946776.1|	-	1.8e-09	36.5	0.0	5.7e-05	21.7	0.0	2.3	2	0	0	2	2	2	2	HI0933-like	protein
DAO	PF01266.19	gi|568163430|ref|YP_008946776.1|	-	3.3e-09	36.1	0.0	0.00059	18.8	0.0	2.4	2	1	0	2	2	2	2	FAD	dependent	oxidoreductase
GIDA	PF01134.17	gi|568163430|ref|YP_008946776.1|	-	4.1e-09	35.7	1.1	5.6e-05	22.1	0.0	2.9	3	0	0	3	3	3	2	Glucose	inhibited	division	protein	A
Lycopene_cycl	PF05834.7	gi|568163430|ref|YP_008946776.1|	-	2.2e-05	23.5	0.0	0.00051	19.0	0.0	2.1	2	0	0	2	2	2	1	Lycopene	cyclase	protein
Pyr_redox_3	PF13738.1	gi|568163430|ref|YP_008946776.1|	-	8.6e-05	22.6	0.1	0.47	10.4	0.0	2.5	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_9	PF13454.1	gi|568163430|ref|YP_008946776.1|	-	0.00021	21.1	0.0	0.019	14.7	0.0	2.3	2	0	0	2	2	2	1	FAD-NAD(P)-binding
Pyr_redox	PF00070.22	gi|568163430|ref|YP_008946776.1|	-	0.00029	21.1	0.2	1.8	9.0	0.1	3.3	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.12	gi|568163430|ref|YP_008946776.1|	-	0.00034	19.7	0.2	0.0024	17.0	0.0	2.2	2	0	0	2	2	2	1	Thi4	family
FAD_binding_2	PF00890.19	gi|568163430|ref|YP_008946776.1|	-	0.00041	19.3	0.7	0.0012	17.7	0.0	2.0	3	0	0	3	3	3	1	FAD	binding	domain
NAD_binding_8	PF13450.1	gi|568163430|ref|YP_008946776.1|	-	0.00042	20.2	0.0	0.0018	18.2	0.0	2.1	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_3	PF01494.14	gi|568163430|ref|YP_008946776.1|	-	0.019	14.0	0.0	0.043	12.8	0.0	1.6	1	0	0	1	1	1	0	FAD	binding	domain
Trp_halogenase	PF04820.9	gi|568163430|ref|YP_008946776.1|	-	0.055	12.0	0.0	0.14	10.7	0.0	1.6	2	0	0	2	2	2	0	Tryptophan	halogenase
BRCT	PF00533.21	gi|568163430|ref|YP_008946776.1|	-	0.077	13.1	0.0	0.17	12.0	0.0	1.6	1	0	0	1	1	1	0	BRCA1	C	Terminus	(BRCT)	domain
GDC-P	PF02347.11	gi|568163430|ref|YP_008946776.1|	-	0.088	11.4	0.0	0.14	10.8	0.0	1.2	1	0	0	1	1	1	0	Glycine	cleavage	system	P-protein
HTH_AsnC-type	PF13404.1	gi|568163431|ref|YP_008946777.1|	-	1.4e-09	37.3	0.0	2.6e-08	33.2	0.0	2.3	2	0	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
HTH_24	PF13412.1	gi|568163431|ref|YP_008946777.1|	-	3.3e-08	32.7	4.4	0.0015	17.8	1.1	2.9	2	1	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
DUF2805	PF10985.3	gi|568163431|ref|YP_008946777.1|	-	5e-05	23.1	0.5	0.017	15.0	0.1	2.5	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2805)
Sigma70_r4	PF04545.11	gi|568163431|ref|YP_008946777.1|	-	0.002	17.4	0.0	0.064	12.5	0.0	2.5	2	0	0	2	2	2	1	Sigma-70,	region	4
Aldo_ket_red	PF00248.16	gi|568163431|ref|YP_008946777.1|	-	0.003	16.4	0.0	0.24	10.1	0.0	2.4	2	1	0	2	2	2	1	Aldo/keto	reductase	family
HTH_27	PF13463.1	gi|568163431|ref|YP_008946777.1|	-	0.0066	16.7	0.0	0.061	13.6	0.0	2.3	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
MarR	PF01047.17	gi|568163431|ref|YP_008946777.1|	-	0.0086	15.7	0.1	1.1	9.0	0.0	2.8	3	0	0	3	3	3	1	MarR	family
HTH_11	PF08279.7	gi|568163431|ref|YP_008946777.1|	-	0.0095	15.5	0.0	5.7	6.6	0.0	2.7	2	0	0	2	2	2	2	HTH	domain
DDRGK	PF09756.4	gi|568163431|ref|YP_008946777.1|	-	0.018	14.4	0.3	0.38	10.1	0.0	2.3	2	0	0	2	2	2	0	DDRGK	domain
HTH_Mga	PF08280.6	gi|568163431|ref|YP_008946777.1|	-	0.03	14.0	0.1	2.9	7.7	0.0	2.6	2	0	0	2	2	2	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
Peptidase_C71	PF12386.3	gi|568163431|ref|YP_008946777.1|	-	0.042	13.2	0.2	0.11	11.9	0.1	1.7	1	0	0	1	1	1	0	Pseudomurein	endo-isopeptidase	Pei
LysM	PF01476.15	gi|568163431|ref|YP_008946777.1|	-	0.17	11.8	0.7	2.2	8.2	0.0	2.9	3	0	0	3	3	3	0	LysM	domain
PDT	PF00800.13	gi|568163432|ref|YP_008946778.1|	-	2.2e-30	105.5	1.1	2.9e-30	105.1	0.8	1.1	1	0	0	1	1	1	1	Prephenate	dehydratase
ACT	PF01842.20	gi|568163432|ref|YP_008946778.1|	-	3.6e-06	26.3	0.0	9.9e-06	24.9	0.0	1.8	1	0	0	1	1	1	1	ACT	domain
PALP	PF00291.20	gi|568163433|ref|YP_008946779.1|	-	6.1e-74	249.0	1.3	7.3e-74	248.7	0.9	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
ACT	PF01842.20	gi|568163433|ref|YP_008946779.1|	-	0.01	15.2	0.8	0.042	13.3	0.0	2.3	2	0	0	2	2	2	0	ACT	domain
ACT_6	PF13740.1	gi|568163433|ref|YP_008946779.1|	-	0.012	15.2	0.0	0.029	14.0	0.0	1.6	1	0	0	1	1	1	0	ACT	domain
EFG_C	PF00679.19	gi|568163433|ref|YP_008946779.1|	-	0.02	14.7	0.0	0.048	13.5	0.0	1.6	1	0	0	1	1	1	0	Elongation	factor	G	C-terminus
HIT	PF01230.18	gi|568163434|ref|YP_008946780.1|	-	5.2e-15	55.7	0.0	6.7e-15	55.4	0.0	1.2	1	0	0	1	1	1	1	HIT	domain
CwfJ_C_1	PF04677.10	gi|568163434|ref|YP_008946780.1|	-	2.4e-08	33.6	0.2	4.8e-08	32.6	0.1	1.5	1	1	0	1	1	1	1	Protein	similar	to	CwfJ	C-terminus	1
DcpS_C	PF11969.3	gi|568163434|ref|YP_008946780.1|	-	1.8e-06	28.1	0.0	2.7e-06	27.5	0.0	1.2	1	0	0	1	1	1	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
DUF4187	PF13821.1	gi|568163434|ref|YP_008946780.1|	-	0.23	11.0	1.3	4.4	6.9	0.0	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4187)
Rad51	PF08423.6	gi|568163435|ref|YP_008946781.1|	-	7.1e-93	310.2	0.2	8.6e-93	309.9	0.1	1.1	1	0	0	1	1	1	1	Rad51
RecA	PF00154.16	gi|568163435|ref|YP_008946781.1|	-	3.6e-14	52.5	0.2	5.2e-14	52.0	0.2	1.2	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
AAA_25	PF13481.1	gi|568163435|ref|YP_008946781.1|	-	5e-14	52.1	0.0	8.1e-14	51.4	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
HHH_5	PF14520.1	gi|568163435|ref|YP_008946781.1|	-	1.9e-10	40.7	0.1	4.7e-10	39.4	0.1	1.7	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
KaiC	PF06745.8	gi|568163435|ref|YP_008946781.1|	-	4.6e-10	39.0	0.1	8.3e-10	38.1	0.1	1.4	1	0	0	1	1	1	1	KaiC
Cdd1	PF11731.3	gi|568163435|ref|YP_008946781.1|	-	0.0051	16.7	0.0	0.013	15.4	0.0	1.7	2	0	0	2	2	2	1	Pathogenicity	locus
AAA_22	PF13401.1	gi|568163435|ref|YP_008946781.1|	-	0.0053	16.9	0.1	0.015	15.4	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
Bac_DnaA	PF00308.13	gi|568163435|ref|YP_008946781.1|	-	0.021	14.4	0.0	0.042	13.4	0.0	1.4	1	0	0	1	1	1	0	Bacterial	dnaA	protein
RTC_insert	PF05189.8	gi|568163435|ref|YP_008946781.1|	-	0.043	13.8	0.1	0.11	12.4	0.0	1.7	1	0	0	1	1	1	0	RNA	3'-terminal	phosphate	cyclase	(RTC),	insert	domain
HHH_2	PF12826.2	gi|568163435|ref|YP_008946781.1|	-	0.057	13.3	0.1	0.17	11.7	0.0	1.8	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
AAA_24	PF13479.1	gi|568163435|ref|YP_008946781.1|	-	0.084	12.4	0.0	0.28	10.7	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
MarR_2	PF12802.2	gi|568163435|ref|YP_008946781.1|	-	0.15	11.7	0.9	6.4	6.5	0.1	3.0	3	0	0	3	3	3	0	MarR	family
UPF0113	PF03657.8	gi|568163436|ref|YP_008946782.1|	-	0.0018	17.9	0.6	0.0024	17.5	0.4	1.3	1	1	0	1	1	1	1	Uncharacterised	protein	family	(UPF0113)
Recep_L_domain	PF01030.19	gi|568163436|ref|YP_008946782.1|	-	0.16	11.9	4.4	2.3	8.2	3.0	2.1	1	1	0	1	1	1	0	Receptor	L	domain
RAMPs	PF03787.10	gi|568163436|ref|YP_008946782.1|	-	0.72	9.6	3.1	1.4	8.6	1.8	1.7	1	1	0	1	1	1	0	RAMP	superfamily
Nol1_Nop2_Fmu	PF01189.12	gi|568163437|ref|YP_008946783.1|	-	2.6e-56	191.0	0.0	3.5e-56	190.6	0.0	1.1	1	0	0	1	1	1	1	NOL1/NOP2/sun	family
PCMT	PF01135.14	gi|568163437|ref|YP_008946783.1|	-	0.0007	19.1	0.0	0.001	18.6	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_4	PF02390.12	gi|568163437|ref|YP_008946783.1|	-	0.001	18.1	0.0	0.0019	17.2	0.0	1.3	1	0	0	1	1	1	1	Putative	methyltransferase
Fibrillarin	PF01269.12	gi|568163437|ref|YP_008946783.1|	-	0.0045	15.9	0.0	0.0069	15.3	0.0	1.2	1	0	0	1	1	1	1	Fibrillarin
FtsJ	PF01728.14	gi|568163437|ref|YP_008946783.1|	-	0.0046	16.9	0.0	0.0062	16.5	0.0	1.3	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
RrnaAD	PF00398.15	gi|568163437|ref|YP_008946783.1|	-	0.015	14.3	0.0	0.024	13.6	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	RNA	adenine	dimethylase
Methyltransf_15	PF09445.5	gi|568163437|ref|YP_008946783.1|	-	0.058	12.9	0.0	0.093	12.2	0.0	1.3	1	0	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
Methyltransf_18	PF12847.2	gi|568163437|ref|YP_008946783.1|	-	0.06	13.9	0.0	0.1	13.1	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|568163437|ref|YP_008946783.1|	-	0.086	12.4	0.0	0.16	11.5	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
MucB_RseB	PF03888.9	gi|568163437|ref|YP_008946783.1|	-	0.12	11.3	0.0	0.18	10.8	0.0	1.2	1	0	0	1	1	1	0	MucB/RseB	family
CYTH	PF01928.16	gi|568163438|ref|YP_008946784.1|	-	2.9e-31	108.5	5.5	3.4e-31	108.3	3.8	1.0	1	0	0	1	1	1	1	CYTH	domain
BDV_P24	PF06595.6	gi|568163438|ref|YP_008946784.1|	-	0.25	11.0	2.3	0.81	9.4	1.6	1.8	1	1	0	1	1	1	0	Borna	disease	virus	P24	protein
SAM_adeno_trans	PF01887.11	gi|568163439|ref|YP_008946785.1|	-	1.3e-82	276.7	0.2	1.4e-82	276.5	0.1	1.0	1	0	0	1	1	1	1	S-adenosyl-l-methionine	hydroxide	adenosyltransferase
CTP_transf_2	PF01467.21	gi|568163440|ref|YP_008946786.1|	-	6.8e-21	74.9	0.1	9e-21	74.5	0.0	1.2	1	0	0	1	1	1	1	Cytidylyltransferase
DUF99	PF01949.11	gi|568163441|ref|YP_008946787.1|	-	2e-35	121.6	0.0	2.3e-35	121.3	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF99
Cdc6_C	PF09079.6	gi|568163442|ref|YP_008946788.1|	-	5.8e-24	83.6	0.3	3.1e-23	81.2	0.1	2.3	2	0	0	2	2	2	1	CDC6,	C	terminal
AAA_22	PF13401.1	gi|568163442|ref|YP_008946788.1|	-	7.8e-13	48.6	0.4	6.4e-12	45.7	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|568163442|ref|YP_008946788.1|	-	3.3e-12	46.7	1.1	6.7e-11	42.5	0.8	2.6	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA	PF00004.24	gi|568163442|ref|YP_008946788.1|	-	4.7e-09	36.5	0.1	1.2e-08	35.2	0.0	1.7	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Arch_ATPase	PF01637.13	gi|568163442|ref|YP_008946788.1|	-	8.1e-07	28.9	1.4	3.7e-05	23.5	0.2	2.3	1	1	0	2	2	2	1	Archaeal	ATPase
NB-ARC	PF00931.17	gi|568163442|ref|YP_008946788.1|	-	6.2e-06	25.2	0.0	9.4e-06	24.6	0.0	1.3	1	0	0	1	1	1	1	NB-ARC	domain
Sigma54_activat	PF00158.21	gi|568163442|ref|YP_008946788.1|	-	0.0017	17.8	0.0	0.0042	16.5	0.0	1.8	1	1	0	1	1	1	1	Sigma-54	interaction	domain
AAA_32	PF13654.1	gi|568163442|ref|YP_008946788.1|	-	0.0019	16.9	0.2	0.058	12.0	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
KAP_NTPase	PF07693.9	gi|568163442|ref|YP_008946788.1|	-	0.0035	16.3	0.1	0.042	12.8	0.0	2.1	1	1	1	2	2	2	1	KAP	family	P-loop	domain
DEAD	PF00270.24	gi|568163442|ref|YP_008946788.1|	-	0.0067	15.9	0.6	3.8	6.9	0.1	2.6	1	1	0	2	2	2	2	DEAD/DEAH	box	helicase
Pox_A32	PF04665.7	gi|568163442|ref|YP_008946788.1|	-	0.0072	15.6	0.1	0.012	14.9	0.1	1.4	1	0	0	1	1	1	1	Poxvirus	A32	protein
DUF815	PF05673.8	gi|568163442|ref|YP_008946788.1|	-	0.013	14.4	0.0	0.022	13.7	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
ResIII	PF04851.10	gi|568163442|ref|YP_008946788.1|	-	0.013	15.3	0.0	0.03	14.1	0.0	1.5	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
Bac_DnaA	PF00308.13	gi|568163442|ref|YP_008946788.1|	-	0.014	15.0	1.2	0.089	12.4	0.8	2.1	1	1	0	1	1	1	0	Bacterial	dnaA	protein
Torsin	PF06309.6	gi|568163442|ref|YP_008946788.1|	-	0.03	14.1	0.0	0.057	13.2	0.0	1.4	1	0	0	1	1	1	0	Torsin
PIF1	PF05970.9	gi|568163442|ref|YP_008946788.1|	-	0.04	12.8	0.0	0.087	11.7	0.0	1.5	1	0	0	1	1	1	0	PIF1-like	helicase
AAA_17	PF13207.1	gi|568163442|ref|YP_008946788.1|	-	0.099	13.4	0.9	0.39	11.5	0.6	2.3	1	1	0	1	1	1	0	AAA	domain
DUF2075	PF09848.4	gi|568163442|ref|YP_008946788.1|	-	0.12	11.3	0.0	0.16	10.9	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
E2F_TDP	PF02319.15	gi|568163442|ref|YP_008946788.1|	-	0.33	10.5	3.2	2.4	7.8	0.1	3.2	3	0	0	3	3	3	0	E2F/DP	family	winged-helix	DNA-binding	domain
MFS_1	PF07690.11	gi|568163443|ref|YP_008946789.1|	-	1.2e-27	96.5	50.5	3.3e-17	62.2	18.2	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_2	PF13347.1	gi|568163443|ref|YP_008946789.1|	-	2.2	6.5	47.8	0.29	9.4	7.4	3.9	1	1	3	4	4	4	0	MFS/sugar	transport	protein
UPF0542	PF15086.1	gi|568163443|ref|YP_008946789.1|	-	2.8	7.7	4.6	1.6	8.5	0.1	2.6	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0542
SWIM	PF04434.12	gi|568164783|ref|YP_008946790.1|	-	0.00093	18.6	0.6	0.0018	17.6	0.4	1.5	1	0	0	1	1	1	1	SWIM	zinc	finger
Elf1	PF05129.8	gi|568163444|ref|YP_008946791.1|	-	2.7e-20	71.8	0.2	3.3e-20	71.5	0.1	1.1	1	0	0	1	1	1	1	Transcription	elongation	factor	Elf1	like
Lar_restr_allev	PF14354.1	gi|568163444|ref|YP_008946791.1|	-	0.00013	22.2	0.2	0.00022	21.4	0.1	1.3	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
zf-FPG_IleRS	PF06827.9	gi|568163444|ref|YP_008946791.1|	-	0.0042	16.6	1.0	0.0073	15.9	0.7	1.4	1	0	0	1	1	1	1	Zinc	finger	found	in	FPG	and	IleRS
OrfB_Zn_ribbon	PF07282.6	gi|568163444|ref|YP_008946791.1|	-	0.013	15.1	0.2	0.02	14.5	0.2	1.3	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
zf-CHY	PF05495.7	gi|568163444|ref|YP_008946791.1|	-	0.035	14.2	0.0	0.048	13.8	0.0	1.3	1	0	0	1	1	1	0	CHY	zinc	finger
DZR	PF12773.2	gi|568163444|ref|YP_008946791.1|	-	0.081	12.7	0.4	0.13	12.0	0.2	1.4	1	0	0	1	1	1	0	Double	zinc	ribbon
TF_Zn_Ribbon	PF08271.7	gi|568163444|ref|YP_008946791.1|	-	0.11	11.8	2.6	0.25	10.6	1.7	1.8	1	1	1	2	2	2	0	TFIIB	zinc-binding
Zn_Tnp_IS1595	PF12760.2	gi|568163444|ref|YP_008946791.1|	-	0.11	12.2	1.1	0.28	11.0	0.8	1.7	1	1	0	1	1	1	0	Transposase	zinc-ribbon	domain
DUF2387	PF09526.5	gi|568163444|ref|YP_008946791.1|	-	0.15	11.9	1.8	0.25	11.2	1.2	1.6	1	1	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
Ribosomal_L32p	PF01783.18	gi|568163444|ref|YP_008946791.1|	-	0.2	11.8	1.9	0.84	9.8	1.3	2.0	1	1	0	1	1	1	0	Ribosomal	L32p	protein	family
zf-ribbon_3	PF13248.1	gi|568163444|ref|YP_008946791.1|	-	0.71	9.1	3.8	6.5	6.1	2.9	2.1	1	1	1	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|568163444|ref|YP_008946791.1|	-	1	9.0	5.2	16	5.1	3.6	2.3	1	1	0	1	1	1	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|568163444|ref|YP_008946791.1|	-	1.5	8.5	5.2	24	4.7	3.6	2.3	1	1	0	1	1	1	0	zinc-ribbon	domain
Ribosomal_L44	PF00935.14	gi|568163444|ref|YP_008946791.1|	-	6.4	6.8	5.8	2.4	8.2	1.0	2.0	1	1	1	2	2	2	0	Ribosomal	protein	L44
PcrB	PF01884.12	gi|568163445|ref|YP_008946792.1|	-	4.9e-58	196.1	2.0	5.5e-58	195.9	1.4	1.0	1	0	0	1	1	1	1	PcrB	family
IMPDH	PF00478.20	gi|568163445|ref|YP_008946792.1|	-	2.6e-05	23.2	1.3	0.00016	20.7	0.4	2.1	2	0	0	2	2	2	1	IMP	dehydrogenase	/	GMP	reductase	domain
His_biosynth	PF00977.16	gi|568163445|ref|YP_008946792.1|	-	0.00031	20.0	0.3	0.00062	19.0	0.2	1.4	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
NAD_binding_7	PF13241.1	gi|568163445|ref|YP_008946792.1|	-	0.0064	16.7	0.7	0.037	14.2	0.4	2.1	2	0	0	2	2	2	1	Putative	NAD(P)-binding
DHO_dh	PF01180.16	gi|568163445|ref|YP_008946792.1|	-	0.018	14.0	0.9	0.026	13.4	0.6	1.2	1	0	0	1	1	1	0	Dihydroorotate	dehydrogenase
NanE	PF04131.9	gi|568163445|ref|YP_008946792.1|	-	0.026	13.4	0.7	0.14	11.0	0.2	2.0	2	0	0	2	2	2	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
Trp_syntA	PF00290.15	gi|568163445|ref|YP_008946792.1|	-	0.029	12.9	1.4	0.04	12.4	0.5	1.7	2	0	0	2	2	2	0	Tryptophan	synthase	alpha	chain
Ribul_P_3_epim	PF00834.14	gi|568163445|ref|YP_008946792.1|	-	0.065	12.3	1.0	0.14	11.2	0.4	1.7	2	0	0	2	2	2	0	Ribulose-phosphate	3	epimerase	family
BON	PF04972.12	gi|568163445|ref|YP_008946792.1|	-	0.11	12.3	5.4	4.8	7.0	1.3	2.5	1	1	1	2	2	2	0	BON	domain
Shikimate_DH	PF01488.15	gi|568163445|ref|YP_008946792.1|	-	0.39	10.7	6.0	0.13	12.3	0.9	2.2	2	0	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
Sec61_beta	PF03911.11	gi|568163446|ref|YP_008946793.1|	-	2.8e-16	59.0	2.5	3.2e-16	58.8	1.7	1.1	1	0	0	1	1	1	1	Sec61beta	family
GNVR	PF13807.1	gi|568163446|ref|YP_008946793.1|	-	0.062	13.0	0.5	0.076	12.7	0.4	1.1	1	0	0	1	1	1	0	G-rich	domain	on	putative	tyrosine	kinase
DUF367	PF04034.8	gi|568164784|ref|YP_008946794.1|	-	1.7e-36	124.6	0.0	2.1e-36	124.3	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF367)
RLI	PF04068.10	gi|568164784|ref|YP_008946794.1|	-	2.3e-12	46.2	0.3	3.6e-12	45.6	0.2	1.2	1	0	0	1	1	1	1	Possible	Fer4-like	domain	in	RNase	L	inhibitor,	RLI
AsnC_trans_reg	PF01037.16	gi|568163447|ref|YP_008946795.1|	-	1.2e-14	53.7	0.6	1.3e-14	53.6	0.4	1.0	1	0	0	1	1	1	1	AsnC	family
Repressor_Mnt	PF11423.3	gi|568163447|ref|YP_008946795.1|	-	0.28	10.5	1.4	4.1	6.7	0.1	2.6	2	0	0	2	2	2	0	Regulatory	protein	Mnt
DUF1743	PF08489.6	gi|568163448|ref|YP_008946796.1|	-	6.3e-32	109.8	0.0	1.5e-31	108.5	0.0	1.7	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1743)
OrfB_Zn_ribbon	PF07282.6	gi|568163448|ref|YP_008946796.1|	-	0.00034	20.1	0.3	0.00075	19.1	0.2	1.5	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
DUF2396	PF09654.5	gi|568163448|ref|YP_008946796.1|	-	0.049	13.5	0.0	0.11	12.4	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2396)
Zn_Tnp_IS1595	PF12760.2	gi|568163448|ref|YP_008946796.1|	-	0.098	12.4	7.8	0.046	13.5	3.5	1.9	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
Zn-ribbon_8	PF09723.5	gi|568163448|ref|YP_008946796.1|	-	0.11	12.4	5.3	2.8	7.9	1.3	2.5	2	0	0	2	2	2	0	Zinc	ribbon	domain
PhnA_Zn_Ribbon	PF08274.7	gi|568163448|ref|YP_008946796.1|	-	0.3	10.9	1.7	1	9.1	1.2	2.0	1	1	0	1	1	1	0	PhnA	Zinc-Ribbon
zf-C2H2	PF00096.21	gi|568163448|ref|YP_008946796.1|	-	2.4	8.6	6.1	7.3	7.1	0.7	2.8	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
zf-H2C2_2	PF13465.1	gi|568163448|ref|YP_008946796.1|	-	6.7	7.2	11.7	0.9	9.9	1.7	2.6	1	1	1	2	2	2	0	Zinc-finger	double	domain
NAD_binding_8	PF13450.1	gi|568164786|ref|YP_008946799.1|	-	0.00081	19.3	0.0	0.0029	17.5	0.0	2.0	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
zf-C2H2_4	PF13894.1	gi|568163450|ref|YP_008946801.1|	-	0.0012	19.0	0.1	0.0025	18.0	0.1	1.6	1	0	0	1	1	1	1	C2H2-type	zinc	finger
SIS	PF01380.17	gi|568163451|ref|YP_008946802.1|	-	1.2e-16	60.4	0.1	2.2e-16	59.6	0.1	1.3	1	0	0	1	1	1	1	SIS	domain
SIS_2	PF13580.1	gi|568163451|ref|YP_008946802.1|	-	1.5e-07	31.2	1.9	3.4e-05	23.5	0.3	2.3	1	1	1	2	2	2	2	SIS	domain
PRMT5	PF05185.11	gi|568163451|ref|YP_008946802.1|	-	0.054	12.4	0.8	0.97	8.2	0.6	2.1	1	1	0	1	1	1	0	PRMT5	arginine-N-methyltransferase
AAA_10	PF12846.2	gi|568163452|ref|YP_008946803.1|	-	7.4e-25	87.9	4.0	3.7e-24	85.7	2.8	1.9	1	1	0	1	1	1	1	AAA-like	domain
DUF853	PF05872.7	gi|568163452|ref|YP_008946803.1|	-	3.3e-06	25.7	0.0	0.037	12.3	0.0	2.1	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
DUF87	PF01935.12	gi|568163452|ref|YP_008946803.1|	-	4.9e-05	23.2	2.5	4.9e-05	23.2	1.7	2.7	2	1	0	2	2	2	1	Domain	of	unknown	function	DUF87
FtsK_SpoIIIE	PF01580.13	gi|568163452|ref|YP_008946803.1|	-	0.00018	21.0	0.0	0.0043	16.5	0.0	2.2	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
T4SS-DNA_transf	PF02534.9	gi|568163452|ref|YP_008946803.1|	-	0.0067	15.0	0.0	0.017	13.7	0.0	1.6	2	0	0	2	2	2	1	Type	IV	secretory	system	Conjugative	DNA	transfer
AAA_22	PF13401.1	gi|568163452|ref|YP_008946803.1|	-	0.0095	16.0	0.7	1.1	9.4	0.0	3.0	3	0	0	3	3	3	1	AAA	domain
TrwB_AAD_bind	PF10412.4	gi|568163452|ref|YP_008946803.1|	-	0.024	13.2	0.1	2.6	6.5	0.0	2.2	2	0	0	2	2	2	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
TraG-D_C	PF12696.2	gi|568163452|ref|YP_008946803.1|	-	0.03	14.1	0.0	0.074	12.9	0.0	1.7	1	0	0	1	1	1	0	TraM	recognition	site	of	TraD	and	TraG
ResIII	PF04851.10	gi|568163452|ref|YP_008946803.1|	-	0.069	12.9	0.0	0.26	11.1	0.0	2.0	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
AAA_25	PF13481.1	gi|568163452|ref|YP_008946803.1|	-	0.077	12.3	0.0	0.16	11.3	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_17	PF13207.1	gi|568163452|ref|YP_008946803.1|	-	0.1	13.4	5.4	0.86	10.4	1.3	3.6	3	1	0	3	3	3	0	AAA	domain
Mpp10	PF04006.7	gi|568163453|ref|YP_008946804.1|	-	0.0044	15.4	0.5	0.0062	14.9	0.4	1.2	1	0	0	1	1	1	1	Mpp10	protein
P63C	PF10546.4	gi|568163453|ref|YP_008946804.1|	-	0.15	12.0	1.3	0.99	9.3	0.1	2.5	2	1	1	3	3	3	0	P63C	domain
CX	PF01705.14	gi|568163453|ref|YP_008946804.1|	-	1.3	9.0	3.2	1.1	9.3	0.3	2.0	2	0	0	2	2	2	0	CX	module
Pox_A_type_inc	PF04508.7	gi|568163453|ref|YP_008946804.1|	-	9.1	6.3	6.6	8.2	6.5	1.4	3.1	2	1	0	2	2	2	0	Viral	A-type	inclusion	protein	repeat
Semialdhyde_dh	PF01118.19	gi|568163454|ref|YP_008946805.1|	-	1.2e-34	119.2	0.0	4.3e-34	117.4	0.0	1.9	2	0	0	2	2	2	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Semialdhyde_dhC	PF02774.13	gi|568163454|ref|YP_008946805.1|	-	8.8e-08	32.2	0.0	1.2e-07	31.7	0.0	1.2	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
F420_oxidored	PF03807.12	gi|568163454|ref|YP_008946805.1|	-	0.047	14.1	0.0	0.14	12.6	0.0	1.8	1	1	0	1	1	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
AA_kinase	PF00696.23	gi|568163455|ref|YP_008946806.1|	-	2.2e-28	99.4	2.7	2.6e-28	99.2	1.9	1.1	1	0	0	1	1	1	1	Amino	acid	kinase	family
HTH_AsnC-type	PF13404.1	gi|568163456|ref|YP_008946807.1|	-	1.8e-13	49.7	0.0	5.4e-13	48.2	0.1	1.7	2	0	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
AsnC_trans_reg	PF01037.16	gi|568163456|ref|YP_008946807.1|	-	2.1e-13	49.7	0.1	3.2e-13	49.1	0.0	1.3	1	0	0	1	1	1	1	AsnC	family
HTH_24	PF13412.1	gi|568163456|ref|YP_008946807.1|	-	1.1e-12	47.1	0.8	5.7e-12	44.8	0.2	2.0	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|568163456|ref|YP_008946807.1|	-	3.6e-06	26.5	1.9	5.7e-06	25.8	0.2	2.1	3	0	0	3	3	3	1	HTH	domain
MarR_2	PF12802.2	gi|568163456|ref|YP_008946807.1|	-	1.4e-05	24.6	0.0	2.8e-05	23.7	0.0	1.4	1	0	0	1	1	1	1	MarR	family
FeoC	PF09012.5	gi|568163456|ref|YP_008946807.1|	-	0.00044	19.9	0.1	0.00068	19.2	0.1	1.3	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
TrmB	PF01978.14	gi|568163456|ref|YP_008946807.1|	-	0.0008	19.0	0.0	0.0014	18.3	0.0	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.17	gi|568163456|ref|YP_008946807.1|	-	0.00081	19.0	0.1	0.0045	16.6	0.1	2.0	2	0	0	2	2	2	1	MarR	family
HTH_20	PF12840.2	gi|568163456|ref|YP_008946807.1|	-	0.0014	18.3	0.0	0.0023	17.7	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_Mga	PF08280.6	gi|568163456|ref|YP_008946807.1|	-	0.0015	18.2	0.1	0.0038	16.9	0.0	1.7	2	0	0	2	2	2	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
DUF2250	PF10007.4	gi|568163456|ref|YP_008946807.1|	-	0.0016	18.3	0.1	0.0029	17.4	0.1	1.5	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF4423	PF14394.1	gi|568163456|ref|YP_008946807.1|	-	0.0033	16.9	0.3	0.0052	16.3	0.2	1.4	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
HTH_DeoR	PF08220.7	gi|568163456|ref|YP_008946807.1|	-	0.0057	16.1	0.2	0.01	15.3	0.1	1.4	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
HTH_9	PF08221.6	gi|568163456|ref|YP_008946807.1|	-	0.013	15.3	0.1	0.026	14.3	0.0	1.5	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
HTH_27	PF13463.1	gi|568163456|ref|YP_008946807.1|	-	0.013	15.8	0.0	0.022	15.0	0.0	1.4	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
Rio2_N	PF09202.6	gi|568163456|ref|YP_008946807.1|	-	0.013	15.5	0.0	0.18	11.9	0.0	2.2	2	0	0	2	2	2	0	Rio2,	N-terminal
NapD	PF03927.8	gi|568163456|ref|YP_008946807.1|	-	0.014	15.2	0.1	0.028	14.2	0.1	1.5	1	1	0	1	1	1	0	NapD	protein
HTH_IclR	PF09339.5	gi|568163456|ref|YP_008946807.1|	-	0.015	14.9	0.0	0.029	13.9	0.0	1.4	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_5	PF01022.15	gi|568163456|ref|YP_008946807.1|	-	0.029	14.0	0.0	0.046	13.3	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
Fe_dep_repress	PF01325.14	gi|568163456|ref|YP_008946807.1|	-	0.031	14.1	0.1	0.069	13.1	0.0	1.6	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_34	PF13601.1	gi|568163456|ref|YP_008946807.1|	-	0.033	14.2	0.1	0.053	13.5	0.0	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
B-block_TFIIIC	PF04182.7	gi|568163456|ref|YP_008946807.1|	-	0.039	13.8	0.0	0.068	13.0	0.0	1.4	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
Mga	PF05043.8	gi|568163456|ref|YP_008946807.1|	-	0.049	13.9	0.1	0.088	13.0	0.0	1.4	1	0	0	1	1	1	0	Mga	helix-turn-helix	domain
Rrf2	PF02082.15	gi|568163456|ref|YP_008946807.1|	-	0.077	13.1	0.1	0.17	12.0	0.1	1.6	1	0	0	1	1	1	0	Transcriptional	regulator
PAX	PF00292.13	gi|568163456|ref|YP_008946807.1|	-	0.086	12.5	0.7	1.2	8.8	0.5	2.1	1	1	0	1	1	1	0	'Paired	box'	domain
Sigma70_r4_2	PF08281.7	gi|568163456|ref|YP_008946807.1|	-	0.088	12.2	0.2	0.32	10.4	0.2	1.9	1	1	0	1	1	1	0	Sigma-70,	region	4
zf-ribbon_3	PF13248.1	gi|568163457|ref|YP_008946808.1|	-	0.0044	16.1	0.7	0.072	12.3	0.1	2.1	2	0	0	2	2	2	1	zinc-ribbon	domain
Desulfoferrod_N	PF06397.7	gi|568163457|ref|YP_008946808.1|	-	0.012	14.9	0.8	0.068	12.5	0.1	2.2	2	1	0	2	2	2	0	Desulfoferrodoxin,	N-terminal	domain
zinc_ribbon_2	PF13240.1	gi|568163457|ref|YP_008946808.1|	-	0.015	14.8	0.7	1.3	8.5	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|568163457|ref|YP_008946808.1|	-	0.029	14.0	0.0	0.045	13.4	0.0	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|568163457|ref|YP_008946808.1|	-	0.032	13.8	0.0	0.049	13.2	0.0	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
Lar_restr_allev	PF14354.1	gi|568163457|ref|YP_008946808.1|	-	0.1	12.9	0.3	0.15	12.3	0.2	1.5	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
TF_Zn_Ribbon	PF08271.7	gi|568163457|ref|YP_008946808.1|	-	0.41	9.9	2.7	0.87	8.9	1.9	1.6	1	1	0	1	1	1	0	TFIIB	zinc-binding
DUF3797	PF12677.2	gi|568163457|ref|YP_008946808.1|	-	1	9.0	3.4	2.4	7.8	0.7	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3797)
RimK	PF08443.6	gi|568163458|ref|YP_008946809.1|	-	1.7e-46	158.0	0.0	3e-46	157.3	0.0	1.3	1	0	0	1	1	1	1	RimK-like	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|568163458|ref|YP_008946809.1|	-	6.8e-14	52.0	0.0	1e-13	51.4	0.0	1.1	1	0	0	1	1	1	1	ATP-grasp	domain
CPSase_L_D2	PF02786.12	gi|568163458|ref|YP_008946809.1|	-	2.6e-05	23.6	0.0	4.3e-05	22.9	0.0	1.3	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
ATP-grasp_3	PF02655.9	gi|568163458|ref|YP_008946809.1|	-	0.00011	22.1	0.0	0.00017	21.4	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_5	PF13549.1	gi|568163458|ref|YP_008946809.1|	-	0.00041	19.6	0.0	0.00085	18.5	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|568163458|ref|YP_008946809.1|	-	0.0006	18.6	0.0	0.00079	18.2	0.0	1.1	1	0	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp	PF02222.17	gi|568163458|ref|YP_008946809.1|	-	0.0034	16.7	0.0	0.0057	16.0	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_2	PF08442.5	gi|568163458|ref|YP_008946809.1|	-	0.017	14.5	0.0	0.029	13.7	0.0	1.3	1	0	0	1	1	1	0	ATP-grasp	domain
ADH_zinc_N	PF00107.21	gi|568163458|ref|YP_008946809.1|	-	0.017	14.6	0.0	0.098	12.2	0.0	2.1	2	0	0	2	2	2	0	Zinc-binding	dehydrogenase
Ins134_P3_kin	PF05770.6	gi|568163458|ref|YP_008946809.1|	-	0.022	13.8	0.2	0.73	8.7	0.1	2.2	1	1	1	2	2	2	0	Inositol	1,	3,	4-trisphosphate	5/6-kinase
Aminotran_3	PF00202.16	gi|568163459|ref|YP_008946810.1|	-	6.9e-104	347.3	0.0	1.1e-103	346.6	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class-III
Aminotran_1_2	PF00155.16	gi|568163459|ref|YP_008946810.1|	-	0.00039	19.4	0.0	0.00097	18.1	0.0	1.6	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Peptidase_M20	PF01546.23	gi|568163460|ref|YP_008946811.1|	-	6.3e-23	81.2	0.0	7.5e-23	81.0	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
Peptidase_M28	PF04389.12	gi|568163460|ref|YP_008946811.1|	-	0.00014	21.7	0.0	0.00018	21.3	0.0	1.3	1	0	0	1	1	1	1	Peptidase	family	M28
M20_dimer	PF07687.9	gi|568163460|ref|YP_008946811.1|	-	0.00042	20.0	0.0	0.00089	18.9	0.0	1.5	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Prenyltransf	PF01255.14	gi|568163461|ref|YP_008946812.1|	-	2.2e-73	246.1	0.2	2.5e-73	245.8	0.1	1.0	1	0	0	1	1	1	1	Putative	undecaprenyl	diphosphate	synthase
Fzo_mitofusin	PF04799.8	gi|568163461|ref|YP_008946812.1|	-	0.079	12.3	0.3	0.13	11.6	0.2	1.3	1	0	0	1	1	1	0	fzo-like	conserved	region
Ribosomal_S8e	PF01201.17	gi|568163462|ref|YP_008946813.1|	-	3.6e-38	130.7	0.5	3.9e-38	130.5	0.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S8e
SRP19	PF01922.12	gi|568163463|ref|YP_008946814.1|	-	0.00013	22.4	0.1	0.00023	21.6	0.1	1.4	1	1	0	1	1	1	1	SRP19	protein
DUF2326	PF10088.4	gi|568163463|ref|YP_008946814.1|	-	0.008	15.8	0.1	0.0085	15.7	0.1	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2326)
B-block_TFIIIC	PF04182.7	gi|568163463|ref|YP_008946814.1|	-	0.051	13.4	0.3	0.077	12.8	0.2	1.3	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
CD47	PF04549.9	gi|568164788|ref|YP_008946815.1|	-	0.33	10.9	13.1	0.41	10.6	5.5	2.0	1	1	1	2	2	2	0	CD47	transmembrane	region
UPF0182	PF03699.8	gi|568164788|ref|YP_008946815.1|	-	0.5	8.2	3.1	0.53	8.1	2.2	1.0	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0182)
DUF2628	PF10947.3	gi|568164788|ref|YP_008946815.1|	-	3.2	7.5	4.8	4.1	7.2	3.3	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2628)
DUF2207	PF09972.4	gi|568164788|ref|YP_008946815.1|	-	6	5.3	9.4	6.8	5.1	6.5	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
Epimerase	PF01370.16	gi|568163464|ref|YP_008946816.1|	-	6.7e-42	143.5	0.1	9e-42	143.1	0.1	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|568163464|ref|YP_008946816.1|	-	1.9e-17	63.0	0.0	2.3e-17	62.8	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
3Beta_HSD	PF01073.14	gi|568163464|ref|YP_008946816.1|	-	3.8e-12	45.4	0.2	5.2e-12	45.0	0.2	1.2	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
NAD_binding_4	PF07993.7	gi|568163464|ref|YP_008946816.1|	-	7.6e-12	44.6	0.2	4.9e-08	32.2	0.0	2.1	2	0	0	2	2	2	2	Male	sterility	protein
Polysacc_synt_2	PF02719.10	gi|568163464|ref|YP_008946816.1|	-	1e-07	31.1	1.6	8e-06	24.9	1.1	2.8	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NmrA	PF05368.8	gi|568163464|ref|YP_008946816.1|	-	0.00023	20.4	0.0	0.00069	18.9	0.0	1.7	2	0	0	2	2	2	1	NmrA-like	family
KR	PF08659.5	gi|568163464|ref|YP_008946816.1|	-	0.00025	20.7	0.0	0.011	15.4	0.0	2.2	2	0	0	2	2	2	1	KR	domain
NAD_binding_10	PF13460.1	gi|568163464|ref|YP_008946816.1|	-	0.00047	20.1	0.0	0.0044	17.0	0.0	2.3	1	1	0	1	1	1	1	NADH(P)-binding
adh_short	PF00106.20	gi|568163464|ref|YP_008946816.1|	-	0.001	19.0	0.1	0.013	15.3	0.0	2.1	2	0	0	2	2	2	1	short	chain	dehydrogenase
TPP_enzyme_M	PF00205.17	gi|568163465|ref|YP_008946817.1|	-	1.1e-35	122.4	0.0	3.4e-35	120.7	0.0	1.9	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	central	domain
TPP_enzyme_N	PF02776.13	gi|568163465|ref|YP_008946817.1|	-	2.8e-26	92.0	0.0	4.9e-26	91.2	0.0	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
PNTB	PF02233.11	gi|568163465|ref|YP_008946817.1|	-	0.024	13.4	0.0	0.044	12.5	0.0	1.3	1	0	0	1	1	1	0	NAD(P)	transhydrogenase	beta	subunit
ChuX_HutX	PF06228.8	gi|568163465|ref|YP_008946817.1|	-	0.077	12.3	0.1	0.25	10.6	0.0	1.8	2	0	0	2	2	2	0	Haem	utilisation	ChuX/HutX
DUF2204	PF09970.4	gi|568163466|ref|YP_008946818.1|	-	1.5e-65	220.0	4.3	1.7e-65	219.9	2.9	1.0	1	0	0	1	1	1	1	Nucleotidyl	transferase	of	unknown	function	(DUF2204)
ThylakoidFormat	PF11264.3	gi|568163466|ref|YP_008946818.1|	-	0.081	12.5	0.5	0.12	11.9	0.1	1.5	2	0	0	2	2	2	0	Thylakoid	formation	protein
Ribosomal_L40e	PF01020.12	gi|568163467|ref|YP_008946819.1|	-	3.1e-07	29.8	4.3	3.6e-07	29.6	3.0	1.2	1	0	0	1	1	1	1	Ribosomal	L40e	family
HypA	PF01155.14	gi|568163467|ref|YP_008946819.1|	-	0.014	15.1	0.3	0.015	15.0	0.2	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
DZR	PF12773.2	gi|568163467|ref|YP_008946819.1|	-	0.018	14.8	0.9	0.022	14.5	0.7	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
zf-tcix	PF14952.1	gi|568163467|ref|YP_008946819.1|	-	0.022	14.0	2.9	0.028	13.7	2.0	1.3	1	0	0	1	1	1	0	Putative	treble-clef,	zinc-finger,	Zn-binding
zf-ribbon_3	PF13248.1	gi|568163467|ref|YP_008946819.1|	-	0.024	13.8	0.2	0.033	13.4	0.1	1.2	1	0	0	1	1	1	0	zinc-ribbon	domain
DnaJ_CXXCXGXG	PF00684.14	gi|568163467|ref|YP_008946819.1|	-	0.028	14.4	0.6	0.033	14.2	0.4	1.1	1	0	0	1	1	1	0	DnaJ	central	domain
zinc_ribbon_2	PF13240.1	gi|568163467|ref|YP_008946819.1|	-	0.034	13.6	0.4	0.048	13.1	0.3	1.3	1	0	0	1	1	1	0	zinc-ribbon	domain
zf-RanBP	PF00641.13	gi|568163467|ref|YP_008946819.1|	-	0.054	12.6	2.3	0.075	12.1	1.6	1.2	1	0	0	1	1	1	0	Zn-finger	in	Ran	binding	protein	and	others
DNA_RNApol_7kD	PF03604.8	gi|568163467|ref|YP_008946819.1|	-	0.37	10.2	7.9	0.14	11.6	3.3	1.9	2	1	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Mu-like_Com	PF10122.4	gi|568163467|ref|YP_008946819.1|	-	0.39	9.8	7.1	0.42	9.6	0.1	2.1	1	1	1	2	2	2	0	Mu-like	prophage	protein	Com
Haem_bd	PF14376.1	gi|568163467|ref|YP_008946819.1|	-	0.4	10.3	4.3	0.29	10.8	0.4	1.9	1	1	1	2	2	2	0	Haem-binding	domain
zinc_ribbon_6	PF14599.1	gi|568163467|ref|YP_008946819.1|	-	0.41	10.4	4.0	0.86	9.4	2.8	1.6	1	1	0	1	1	1	0	Zinc-ribbon
Cytochrome_C7	PF14522.1	gi|568163467|ref|YP_008946819.1|	-	0.47	10.1	3.9	1.5	8.4	2.7	1.8	1	1	0	1	1	1	0	Cytochrome	c7
zf-C2H2_3	PF13878.1	gi|568163467|ref|YP_008946819.1|	-	0.58	9.7	4.7	1.1	8.8	0.1	2.1	1	1	1	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
Paired_CXXCH_1	PF09699.5	gi|568163467|ref|YP_008946819.1|	-	0.58	9.7	2.7	0.37	10.3	0.2	1.8	2	0	0	2	2	2	0	Doubled	CXXCH	motif	(Paired_CXXCH_1)
DUF35_N	PF12172.3	gi|568163467|ref|YP_008946819.1|	-	1.5	8.8	3.9	4.8	7.2	2.7	1.8	1	1	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
KH_5	PF13184.1	gi|568163468|ref|YP_008946820.1|	-	2.8e-09	36.6	0.1	5.3e-09	35.7	0.1	1.5	1	0	0	1	1	1	1	NusA-like	KH	domain
tRNA-synt_2	PF00152.15	gi|568163469|ref|YP_008946821.1|	-	4.3e-92	308.4	0.1	5.6e-92	308.0	0.1	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.20	gi|568163469|ref|YP_008946821.1|	-	2.8e-15	55.9	0.2	6.4e-15	54.7	0.2	1.6	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
TruD	PF01142.13	gi|568163470|ref|YP_008946822.1|	-	6.4e-43	146.8	0.2	2e-33	115.6	0.0	2.0	1	1	1	2	2	2	2	tRNA	pseudouridine	synthase	D	(TruD)
PTH2	PF01981.11	gi|568163471|ref|YP_008946823.1|	-	1.1e-45	154.0	0.1	1.2e-45	153.9	0.1	1.0	1	0	0	1	1	1	1	Peptidyl-tRNA	hydrolase	PTH2
TP_methylase	PF00590.15	gi|568163471|ref|YP_008946823.1|	-	0.012	15.2	0.5	0.082	12.5	0.0	1.9	1	1	1	2	2	2	0	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
DUF1610	PF07754.6	gi|568163472|ref|YP_008946824.1|	-	3.9e-16	58.7	18.4	6.1e-10	39.0	2.5	2.2	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF1610)
DZR	PF12773.2	gi|568163472|ref|YP_008946824.1|	-	1e-05	25.2	10.0	0.00043	20.0	3.8	2.4	1	1	1	2	2	2	2	Double	zinc	ribbon
OrfB_Zn_ribbon	PF07282.6	gi|568163472|ref|YP_008946824.1|	-	1.3e-05	24.7	8.2	7.4e-05	22.3	1.1	2.2	1	1	1	2	2	2	1	Putative	transposase	DNA-binding	domain
zf-ribbon_3	PF13248.1	gi|568163472|ref|YP_008946824.1|	-	3.3e-05	22.9	3.0	3.3e-05	22.9	2.1	3.2	2	2	0	2	2	2	1	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|568163472|ref|YP_008946824.1|	-	0.00026	20.3	14.1	0.089	12.3	0.1	4.0	3	1	0	3	3	3	1	zinc-ribbon	domain
Nudix_N_2	PF14803.1	gi|568163472|ref|YP_008946824.1|	-	0.00065	19.3	9.0	0.79	9.4	0.4	3.4	3	1	0	3	3	3	2	Nudix	N-terminal
A2L_zn_ribbon	PF08792.5	gi|568163472|ref|YP_008946824.1|	-	0.00076	18.8	16.0	0.0073	15.7	2.8	2.9	2	2	0	2	2	2	1	A2L	zinc	ribbon	domain
Auto_anti-p27	PF06677.7	gi|568163472|ref|YP_008946824.1|	-	0.0026	17.4	7.9	0.011	15.5	1.5	2.5	2	1	0	2	2	2	1	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
PhnA_Zn_Ribbon	PF08274.7	gi|568163472|ref|YP_008946824.1|	-	0.0042	16.8	6.5	0.33	10.7	0.2	3.2	3	0	0	3	3	3	1	PhnA	Zinc-Ribbon
ADK_lid	PF05191.9	gi|568163472|ref|YP_008946824.1|	-	0.0059	16.2	8.3	0.45	10.2	2.9	3.0	2	1	0	2	2	2	1	Adenylate	kinase,	active	site	lid
Prok-RING_1	PF14446.1	gi|568163472|ref|YP_008946824.1|	-	0.011	15.4	11.5	0.011	15.3	2.8	2.4	1	1	1	2	2	2	0	Prokaryotic	RING	finger	family	1
PolC_DP2	PF03833.8	gi|568163472|ref|YP_008946824.1|	-	0.012	13.3	3.2	0.014	13.0	2.2	1.0	1	0	0	1	1	1	0	DNA	polymerase	II	large	subunit	DP2
Rpr2	PF04032.11	gi|568163472|ref|YP_008946824.1|	-	0.013	15.4	8.6	0.26	11.2	5.9	2.4	1	1	0	1	1	1	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
zf-MYND	PF01753.13	gi|568163472|ref|YP_008946824.1|	-	0.013	15.3	2.2	0.013	15.3	1.5	2.0	1	1	1	2	2	2	0	MYND	finger
DUF1272	PF06906.6	gi|568163472|ref|YP_008946824.1|	-	0.014	15.2	8.1	0.38	10.6	0.4	2.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1272)
TerY-C	PF15616.1	gi|568163472|ref|YP_008946824.1|	-	0.018	14.9	0.5	0.018	14.9	0.4	2.1	1	1	1	2	2	2	0	TerY-C	metal	binding	domain
DUF35_N	PF12172.3	gi|568163472|ref|YP_008946824.1|	-	0.018	14.9	11.7	0.48	10.3	0.0	3.3	2	1	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
HypA	PF01155.14	gi|568163472|ref|YP_008946824.1|	-	0.021	14.5	0.9	0.021	14.5	0.7	2.1	1	1	1	2	2	2	0	Hydrogenase	expression/synthesis	hypA	family
tRNA-synt_1f	PF01921.13	gi|568163472|ref|YP_008946824.1|	-	0.026	13.2	0.1	0.027	13.1	0.1	1.1	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(K)
TF_Zn_Ribbon	PF08271.7	gi|568163472|ref|YP_008946824.1|	-	0.028	13.7	15.9	0.23	10.8	0.2	3.5	3	1	1	4	4	3	0	TFIIB	zinc-binding
zf-CHY	PF05495.7	gi|568163472|ref|YP_008946824.1|	-	0.042	13.9	0.2	0.042	13.9	0.1	2.2	1	1	1	2	2	2	0	CHY	zinc	finger
IBR	PF01485.16	gi|568163472|ref|YP_008946824.1|	-	0.053	13.4	8.6	0.81	9.5	5.9	2.1	1	1	0	1	1	1	0	IBR	domain
DUF164	PF02591.10	gi|568163472|ref|YP_008946824.1|	-	0.075	12.8	11.3	1.7	8.5	0.0	3.6	3	1	0	3	3	3	0	Putative	zinc	ribbon	domain
NinF	PF05810.7	gi|568163472|ref|YP_008946824.1|	-	0.089	12.6	0.3	0.089	12.6	0.2	2.7	1	1	1	2	2	2	0	NinF	protein
zf-UDP	PF14569.1	gi|568163472|ref|YP_008946824.1|	-	0.12	12.1	6.2	0.14	11.9	4.3	1.1	1	0	0	1	1	1	0	Zinc-binding	RING-finger
C1_1	PF00130.17	gi|568163472|ref|YP_008946824.1|	-	0.12	12.0	9.2	0.22	11.2	1.5	2.3	1	1	1	2	2	2	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
DRP	PF06044.7	gi|568163472|ref|YP_008946824.1|	-	0.13	11.2	1.3	0.12	11.3	0.9	1.1	1	0	0	1	1	1	0	Dam-replacing	family
UPF0547	PF10571.4	gi|568163472|ref|YP_008946824.1|	-	0.14	11.8	16.2	1.8	8.3	8.9	3.4	2	1	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zinc_ribbon_4	PF13717.1	gi|568163472|ref|YP_008946824.1|	-	0.14	11.8	8.5	6.3	6.5	0.0	3.8	4	0	0	4	4	4	0	zinc-ribbon	domain
zf-RING_3	PF14369.1	gi|568163472|ref|YP_008946824.1|	-	0.16	12.0	13.9	1.1	9.3	1.6	3.3	2	2	1	3	3	3	0	zinc-finger
Tnp_zf-ribbon_2	PF13842.1	gi|568163472|ref|YP_008946824.1|	-	0.16	12.4	13.8	0.31	11.4	2.4	3.0	2	1	1	3	3	3	0	DDE_Tnp_1-like	zinc-ribbon
Zn-ribbon_8	PF09723.5	gi|568163472|ref|YP_008946824.1|	-	0.16	11.9	14.6	0.86	9.6	3.5	3.5	1	1	3	4	4	4	0	Zinc	ribbon	domain
NOB1_Zn_bind	PF08772.6	gi|568163472|ref|YP_008946824.1|	-	0.17	11.7	10.0	0.084	12.7	2.2	2.2	1	1	1	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
FUR	PF01475.14	gi|568163472|ref|YP_008946824.1|	-	0.17	11.8	0.8	1.5	8.8	0.0	2.2	2	1	1	3	3	2	0	Ferric	uptake	regulator	family
zf-C2HC5	PF06221.8	gi|568163472|ref|YP_008946824.1|	-	0.17	11.6	10.1	0.06	13.1	2.1	2.4	1	1	1	2	2	2	0	Putative	zinc	finger	motif,	C2HC5-type
Zn_ribbon_recom	PF13408.1	gi|568163472|ref|YP_008946824.1|	-	0.29	11.4	10.6	7.6	6.8	5.3	2.3	2	0	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
NMD3	PF04981.8	gi|568163472|ref|YP_008946824.1|	-	0.34	10.0	9.3	1.4	7.9	6.6	1.9	1	1	1	2	2	2	0	NMD3	family
DUF2296	PF10058.4	gi|568163472|ref|YP_008946824.1|	-	0.35	10.6	16.6	1.2	8.8	2.5	3.6	2	2	0	2	2	2	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
PHD	PF00628.24	gi|568163472|ref|YP_008946824.1|	-	0.44	10.2	11.9	1.3	8.7	1.4	3.0	1	1	1	2	2	2	0	PHD-finger
zf-TFIIB	PF13453.1	gi|568163472|ref|YP_008946824.1|	-	0.45	9.7	13.7	57	3.0	9.5	2.8	1	1	1	2	2	2	0	Transcription	factor	zinc-finger
zinc_ribbon_5	PF13719.1	gi|568163472|ref|YP_008946824.1|	-	0.48	10.0	10.1	6.5	6.4	0.0	3.8	4	0	0	4	4	4	0	zinc-ribbon	domain
zf-B_box	PF00643.19	gi|568163472|ref|YP_008946824.1|	-	0.54	10.1	11.8	0.83	9.5	4.4	2.7	1	1	1	2	2	2	0	B-box	zinc	finger
Sgf11	PF08209.6	gi|568163472|ref|YP_008946824.1|	-	0.6	9.4	12.4	0.97	8.8	0.1	3.8	3	1	1	4	4	4	0	Sgf11	(transcriptional	regulation	protein)
Elf1	PF05129.8	gi|568163472|ref|YP_008946824.1|	-	0.85	9.3	7.6	15	5.3	3.3	2.4	1	1	1	2	2	2	0	Transcription	elongation	factor	Elf1	like
zf-FPG_IleRS	PF06827.9	gi|568163472|ref|YP_008946824.1|	-	0.85	9.3	7.8	2.4	7.8	1.7	2.7	2	1	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
Rubredoxin	PF00301.15	gi|568163472|ref|YP_008946824.1|	-	0.87	9.5	13.3	1.2	9.0	1.2	3.3	3	1	0	3	3	2	0	Rubredoxin
zinc-ribbons_6	PF07191.7	gi|568163472|ref|YP_008946824.1|	-	0.92	9.3	8.4	1.1	9.1	2.3	2.2	1	1	1	2	2	2	0	zinc-ribbons
zf-C3HC4_3	PF13920.1	gi|568163472|ref|YP_008946824.1|	-	0.98	9.1	13.3	2.2	8.0	4.3	2.8	1	1	1	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
Acetone_carb_G	PF08882.6	gi|568163472|ref|YP_008946824.1|	-	1.1	9.3	7.2	1.5	8.8	0.6	2.5	1	1	1	2	2	2	0	Acetone	carboxylase	gamma	subunit
zf-RING_5	PF14634.1	gi|568163472|ref|YP_008946824.1|	-	1.2	8.8	11.2	4.3	7.1	7.8	2.0	1	1	0	1	1	1	0	zinc-RING	finger	domain
DUF4206	PF13901.1	gi|568163472|ref|YP_008946824.1|	-	1.4	8.4	6.7	1.6	8.2	4.7	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4206)
Dynactin_p62	PF05502.8	gi|568163472|ref|YP_008946824.1|	-	1.5	7.5	9.7	0.67	8.6	5.6	1.3	1	1	0	1	1	1	0	Dynactin	p62	family
RNA_POL_M_15KD	PF02150.11	gi|568163472|ref|YP_008946824.1|	-	1.5	8.5	10.1	0.5	10.0	0.6	3.0	1	1	1	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
C1_3	PF07649.7	gi|568163472|ref|YP_008946824.1|	-	1.7	8.7	17.2	0.45	10.5	3.8	2.8	2	1	0	2	2	2	0	C1-like	domain
DUF2321	PF10083.4	gi|568163472|ref|YP_008946824.1|	-	1.7	8.1	4.5	3.5	7.1	1.5	2.1	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2321)
zf-IS66	PF13005.2	gi|568163472|ref|YP_008946824.1|	-	1.7	8.6	14.1	4.8	7.2	0.1	3.4	1	1	2	3	3	3	0	zinc-finger	binding	domain	of	transposase	IS66
zf-UBP	PF02148.14	gi|568163472|ref|YP_008946824.1|	-	1.8	8.7	7.3	4.7	7.3	0.6	2.6	2	1	1	3	3	3	0	Zn-finger	in	ubiquitin-hydrolases	and	other	protein
Chordopox_RPO7	PF05864.7	gi|568163472|ref|YP_008946824.1|	-	1.8	8.7	5.0	2	8.5	0.0	2.8	3	0	0	3	3	3	0	Chordopoxvirus	DNA-directed	RNA	polymerase	7	kDa	polypeptide	(RPO7)
Ribosomal_L37ae	PF01780.14	gi|568163472|ref|YP_008946824.1|	-	2.1	8.2	5.4	1.1	9.1	1.5	1.9	1	1	0	1	1	1	0	Ribosomal	L37ae	protein	family
zf-C4_Topoisom	PF01396.14	gi|568163472|ref|YP_008946824.1|	-	2.2	7.8	14.5	2.2	7.8	0.4	3.4	1	1	1	3	3	3	0	Topoisomerase	DNA	binding	C4	zinc	finger
zf-C2H2	PF00096.21	gi|568163472|ref|YP_008946824.1|	-	2.2	8.8	16.5	9.7	6.7	0.5	4.0	3	1	1	4	4	4	0	Zinc	finger,	C2H2	type
zf-NADH-PPase	PF09297.6	gi|568163472|ref|YP_008946824.1|	-	2.7	7.6	13.3	2.6	7.6	0.2	3.2	2	1	0	3	3	3	0	NADH	pyrophosphatase	zinc	ribbon	domain
LIM	PF00412.17	gi|568163472|ref|YP_008946824.1|	-	3	7.9	9.4	0.35	10.9	0.7	2.2	1	1	1	2	2	2	0	LIM	domain
zf-H2C2_2	PF13465.1	gi|568163472|ref|YP_008946824.1|	-	3.9	7.9	19.5	13	6.2	2.8	4.0	2	2	1	3	3	3	0	Zinc-finger	double	domain
Ribosomal_L40e	PF01020.12	gi|568163472|ref|YP_008946824.1|	-	4	7.1	7.4	18	4.9	0.0	2.4	2	1	0	2	2	2	0	Ribosomal	L40e	family
zf-DHHC	PF01529.15	gi|568163472|ref|YP_008946824.1|	-	4	6.7	6.1	7.3	5.9	4.2	1.6	1	1	0	1	1	1	0	DHHC	palmitoyltransferase
FYDLN_acid	PF09538.5	gi|568163472|ref|YP_008946824.1|	-	4.4	7.9	7.2	2.9e+02	2.0	5.0	2.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(FYDLN_acid)
DNA_ligase_ZBD	PF03119.11	gi|568163472|ref|YP_008946824.1|	-	4.5	7.0	12.0	0.67	9.7	0.5	3.2	3	0	0	3	3	3	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
Ribosomal_S27e	PF01667.12	gi|568163472|ref|YP_008946824.1|	-	4.6	6.8	9.9	6.3	6.4	0.0	3.5	2	1	0	2	2	1	0	Ribosomal	protein	S27
zf-AN1	PF01428.11	gi|568163472|ref|YP_008946824.1|	-	4.7	7.1	11.6	25	4.8	1.7	2.9	2	1	1	3	3	3	0	AN1-like	Zinc	finger
FYVE_2	PF02318.11	gi|568163472|ref|YP_008946824.1|	-	4.8	7.1	6.8	7.3	6.5	4.7	1.3	1	1	0	1	1	1	0	FYVE-type	zinc	finger
Ribosomal_L32p	PF01783.18	gi|568163472|ref|YP_008946824.1|	-	7.2	6.8	11.4	3.6e+03	-1.8	7.9	3.2	1	1	0	1	1	0	0	Ribosomal	L32p	protein	family
RNHCP	PF12647.2	gi|568163472|ref|YP_008946824.1|	-	7.8	6.3	10.2	0.6	9.9	0.7	2.6	1	1	1	2	2	2	0	RNHCP	domain
zf-tcix	PF14952.1	gi|568163472|ref|YP_008946824.1|	-	8	5.8	12.2	9.3	5.6	0.2	3.1	3	0	0	3	3	3	0	Putative	treble-clef,	zinc-finger,	Zn-binding
Spt4	PF06093.8	gi|568163472|ref|YP_008946824.1|	-	8.2	6.3	7.1	0.58	10.0	0.2	2.1	1	1	1	2	2	2	0	Spt4/RpoE2	zinc	finger
Zn_Tnp_IS1595	PF12760.2	gi|568163472|ref|YP_008946824.1|	-	8.7	6.2	21.6	9	6.2	0.2	3.9	2	1	1	3	3	3	0	Transposase	zinc-ribbon	domain
CpXC	PF14353.1	gi|568163472|ref|YP_008946824.1|	-	10	6.1	10.2	27	4.7	0.9	3.2	1	1	2	3	3	3	0	CpXC	protein
EF1_GNE	PF00736.14	gi|568163473|ref|YP_008946825.1|	-	4.5e-23	80.7	0.1	4.9e-23	80.6	0.1	1.0	1	0	0	1	1	1	1	EF-1	guanine	nucleotide	exchange	domain
Cullin_Nedd8	PF10557.4	gi|568163474|ref|YP_008946826.1|	-	0.0038	17.0	0.0	0.005	16.6	0.0	1.2	1	0	0	1	1	1	1	Cullin	protein	neddylation	domain
Methyltrn_RNA_3	PF02598.12	gi|568163474|ref|YP_008946826.1|	-	0.016	14.5	0.0	0.017	14.5	0.0	1.0	1	0	0	1	1	1	0	Putative	RNA	methyltransferase
EAP30	PF04157.11	gi|568163474|ref|YP_008946826.1|	-	0.029	13.5	0.2	0.034	13.3	0.2	1.0	1	0	0	1	1	1	0	EAP30/Vps36	family
XPG_I	PF00867.13	gi|568163475|ref|YP_008946827.1|	-	4.7e-26	90.6	0.0	1.2e-25	89.3	0.0	1.7	1	0	0	1	1	1	1	XPG	I-region
XPG_N	PF00752.12	gi|568163475|ref|YP_008946827.1|	-	2.6e-11	43.6	0.0	6.4e-11	42.4	0.0	1.7	1	0	0	1	1	1	1	XPG	N-terminal	domain
5_3_exonuc	PF01367.15	gi|568163475|ref|YP_008946827.1|	-	2.5e-05	24.4	0.2	2.5e-05	24.4	0.1	2.3	2	1	0	2	2	2	1	5'-3'	exonuclease,	C-terminal	SAM	fold
HHH_2	PF12826.2	gi|568163475|ref|YP_008946827.1|	-	0.026	14.3	0.1	0.074	12.9	0.0	1.7	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
DUF2458	PF10454.4	gi|568163475|ref|YP_008946827.1|	-	0.12	12.2	4.1	0.075	12.9	0.4	2.5	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2458)
COG5	PF10392.4	gi|568163475|ref|YP_008946827.1|	-	0.64	9.9	5.2	0.15	12.0	0.6	2.1	3	0	0	3	3	3	0	Golgi	transport	complex	subunit	5
DUF3391	PF11871.3	gi|568163475|ref|YP_008946827.1|	-	0.83	9.8	4.5	0.45	10.7	0.6	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3391)
NAD_binding_7	PF13241.1	gi|568163476|ref|YP_008946828.1|	-	1.4e-25	89.5	0.0	2e-25	89.0	0.0	1.2	1	0	0	1	1	1	1	Putative	NAD(P)-binding
TrkA_N	PF02254.13	gi|568163476|ref|YP_008946828.1|	-	7.3e-06	25.9	0.0	1.2e-05	25.2	0.0	1.3	1	0	0	1	1	1	1	TrkA-N	domain
Ribosomal_S9	PF00380.14	gi|568163476|ref|YP_008946828.1|	-	0.092	12.9	0.0	0.21	11.8	0.0	1.5	1	0	0	1	1	1	0	Ribosomal	protein	S9/S16
GFO_IDH_MocA	PF01408.17	gi|568163476|ref|YP_008946828.1|	-	0.15	12.6	0.0	0.23	11.9	0.0	1.3	1	0	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
GlutR_N	PF05201.10	gi|568164789|ref|YP_008946829.1|	-	2.8e-33	114.6	0.0	5.9e-33	113.5	0.0	1.5	1	0	0	1	1	1	1	Glutamyl-tRNAGlu	reductase,	N-terminal	domain
GlutR_dimer	PF00745.15	gi|568164789|ref|YP_008946829.1|	-	4.8e-17	61.7	1.7	8.4e-17	60.9	1.2	1.4	1	0	0	1	1	1	1	Glutamyl-tRNAGlu	reductase,	dimerisation	domain
Shikimate_DH	PF01488.15	gi|568164789|ref|YP_008946829.1|	-	6.7e-13	48.9	0.0	1.7e-12	47.6	0.0	1.7	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
F420_oxidored	PF03807.12	gi|568164789|ref|YP_008946829.1|	-	2.1e-06	28.0	0.0	6e-06	26.5	0.0	1.9	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
ThiF	PF00899.16	gi|568164789|ref|YP_008946829.1|	-	0.00088	19.1	0.1	0.0027	17.5	0.0	2.0	2	0	0	2	2	2	1	ThiF	family
NAD_binding_2	PF03446.10	gi|568164789|ref|YP_008946829.1|	-	0.0022	17.8	0.0	0.004	17.0	0.0	1.4	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Ldh_1_N	PF00056.18	gi|568164789|ref|YP_008946829.1|	-	0.0029	17.4	0.0	0.0058	16.4	0.0	1.5	1	0	0	1	1	1	1	lactate/malate	dehydrogenase,	NAD	binding	domain
NAD_binding_7	PF13241.1	gi|568164789|ref|YP_008946829.1|	-	0.0036	17.5	0.0	0.013	15.7	0.0	2.0	2	0	0	2	2	2	1	Putative	NAD(P)-binding
NAD_Gly3P_dh_N	PF01210.18	gi|568164789|ref|YP_008946829.1|	-	0.0077	15.9	0.0	0.02	14.6	0.0	1.7	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
TrkA_N	PF02254.13	gi|568164789|ref|YP_008946829.1|	-	0.0093	15.9	0.0	0.027	14.4	0.0	1.9	1	0	0	1	1	1	1	TrkA-N	domain
GFO_IDH_MocA	PF01408.17	gi|568164789|ref|YP_008946829.1|	-	0.015	15.8	0.0	0.029	14.9	0.0	1.4	1	0	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
2-Hacid_dh_C	PF02826.14	gi|568164789|ref|YP_008946829.1|	-	0.015	14.4	0.0	0.026	13.6	0.0	1.4	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
ApbA	PF02558.11	gi|568164789|ref|YP_008946829.1|	-	0.019	14.4	0.0	0.045	13.1	0.0	1.7	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
DapB_N	PF01113.15	gi|568164789|ref|YP_008946829.1|	-	0.11	12.4	0.0	0.29	11.0	0.0	1.8	1	1	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
ALAD	PF00490.16	gi|568163477|ref|YP_008946830.1|	-	1.2e-140	468.0	0.7	1.4e-140	467.8	0.5	1.0	1	0	0	1	1	1	1	Delta-aminolevulinic	acid	dehydratase
ComA	PF02679.10	gi|568163477|ref|YP_008946830.1|	-	0.085	11.8	0.0	4.3	6.2	0.0	2.3	2	0	0	2	2	2	0	(2R)-phospho-3-sulfolactate	synthase	(ComA)
Aminotran_3	PF00202.16	gi|568163478|ref|YP_008946831.1|	-	4.5e-68	229.5	0.0	6.5e-68	229.0	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class-III
Aminotran_1_2	PF00155.16	gi|568163478|ref|YP_008946831.1|	-	8.5e-06	24.9	0.0	1.1e-05	24.5	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Porphobil_deam	PF01379.15	gi|568163479|ref|YP_008946832.1|	-	1.6e-56	190.5	0.6	2.1e-56	190.2	0.4	1.1	1	0	0	1	1	1	1	Porphobilinogen	deaminase,	dipyromethane	cofactor	binding	domain
Porphobil_deamC	PF03900.10	gi|568163479|ref|YP_008946832.1|	-	5.5e-09	35.9	0.0	1.4e-08	34.7	0.0	1.7	1	0	0	1	1	1	1	Porphobilinogen	deaminase,	C-terminal	domain
HEM4	PF02602.10	gi|568164790|ref|YP_008946833.1|	-	5.7e-19	68.2	0.0	7.1e-19	67.9	0.0	1.1	1	0	0	1	1	1	1	Uroporphyrinogen-III	synthase	HemD
TIR	PF01582.15	gi|568164790|ref|YP_008946833.1|	-	0.15	11.5	0.7	0.29	10.5	0.4	1.6	1	1	0	1	1	1	0	TIR	domain
Phosphodiest	PF01663.17	gi|568163481|ref|YP_008946835.1|	-	2.5e-35	122.4	0.0	1e-17	64.5	0.0	2.1	2	0	0	2	2	2	2	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
PglZ	PF08665.7	gi|568163481|ref|YP_008946835.1|	-	0.0005	19.7	0.0	0.011	15.4	0.0	2.3	2	0	0	2	2	2	1	PglZ	domain
Sulfatase	PF00884.18	gi|568163481|ref|YP_008946835.1|	-	0.0016	17.7	0.0	0.02	14.0	0.0	2.6	3	0	0	3	3	3	1	Sulfatase
Fer2_BFD	PF04324.10	gi|568164791|ref|YP_008946836.1|	-	2.8e-05	24.0	0.5	6.5e-05	22.9	0.4	1.7	1	0	0	1	1	1	1	BFD-like	[2Fe-2S]	binding	domain
DAO	PF01266.19	gi|568164791|ref|YP_008946836.1|	-	0.0065	15.4	0.0	0.12	11.2	0.0	2.4	3	0	0	3	3	3	1	FAD	dependent	oxidoreductase
DAO	PF01266.19	gi|568163482|ref|YP_008946837.1|	-	3.1e-48	164.5	0.0	3.5e-48	164.3	0.0	1.0	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
GIDA	PF01134.17	gi|568163482|ref|YP_008946837.1|	-	4.7e-06	25.7	0.4	0.00016	20.6	0.0	2.1	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
Pyr_redox_3	PF13738.1	gi|568163482|ref|YP_008946837.1|	-	6.6e-05	23.0	0.0	0.00018	21.6	0.0	1.7	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|568163482|ref|YP_008946837.1|	-	0.00019	21.3	0.0	0.0007	19.5	0.0	2.0	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.12	gi|568163482|ref|YP_008946837.1|	-	0.0003	19.9	0.2	0.0006	18.9	0.1	1.5	1	0	0	1	1	1	1	Thi4	family
NAD_binding_9	PF13454.1	gi|568163482|ref|YP_008946837.1|	-	0.00057	19.6	0.0	0.0069	16.1	0.0	2.1	2	0	0	2	2	2	1	FAD-NAD(P)-binding
Pyr_redox_2	PF07992.9	gi|568163482|ref|YP_008946837.1|	-	0.0032	17.3	0.0	1.2	8.9	0.0	2.2	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.19	gi|568163482|ref|YP_008946837.1|	-	0.005	15.7	0.0	0.29	9.9	0.1	2.1	2	0	0	2	2	2	1	FAD	binding	domain
FAD_binding_3	PF01494.14	gi|568163482|ref|YP_008946837.1|	-	0.0057	15.7	0.1	0.009	15.1	0.1	1.3	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox	PF00070.22	gi|568163482|ref|YP_008946837.1|	-	0.018	15.4	0.1	0.27	11.6	0.0	2.4	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Shikimate_DH	PF01488.15	gi|568163482|ref|YP_008946837.1|	-	0.025	14.6	0.2	0.047	13.7	0.2	1.4	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
ThiF	PF00899.16	gi|568163482|ref|YP_008946837.1|	-	0.076	12.8	0.0	0.13	12.1	0.0	1.4	1	0	0	1	1	1	0	ThiF	family
Amino_oxidase	PF01593.19	gi|568163482|ref|YP_008946837.1|	-	0.1	11.6	0.0	1.3	8.0	0.0	2.2	2	0	0	2	2	2	0	Flavin	containing	amine	oxidoreductase
Lycopene_cycl	PF05834.7	gi|568163482|ref|YP_008946837.1|	-	0.11	11.3	0.0	0.25	10.2	0.0	1.5	2	0	0	2	2	2	0	Lycopene	cyclase	protein
TrkA_N	PF02254.13	gi|568163482|ref|YP_008946837.1|	-	0.16	11.9	0.2	0.36	10.8	0.1	1.5	1	0	0	1	1	1	0	TrkA-N	domain
Lactamase_B_2	PF12706.2	gi|568163483|ref|YP_008946838.1|	-	1.7e-08	34.2	0.1	4.4e-08	32.9	0.0	1.7	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|568163483|ref|YP_008946838.1|	-	0.016	14.8	0.0	0.031	13.9	0.0	1.5	1	0	0	1	1	1	0	Metallo-beta-lactamase	superfamily
Uteroglobin	PF01099.12	gi|568163483|ref|YP_008946838.1|	-	0.042	13.6	0.1	15	5.4	0.0	3.1	3	0	0	3	3	3	0	Uteroglobin	family
Methyltransf_24	PF13578.1	gi|568163483|ref|YP_008946838.1|	-	0.11	13.3	0.3	0.68	10.7	0.0	2.3	1	1	1	2	2	2	0	Methyltransferase	domain
DNA_ligase_A_M	PF01068.16	gi|568163484|ref|YP_008946839.1|	-	1.7e-60	203.8	1.1	2.8e-60	203.1	0.8	1.4	1	0	0	1	1	1	1	ATP	dependent	DNA	ligase	domain
DNA_ligase_A_N	PF04675.9	gi|568163484|ref|YP_008946839.1|	-	9.6e-52	175.3	1.8	3.2e-51	173.6	1.4	1.8	2	0	0	2	2	2	1	DNA	ligase	N	terminus
DNA_ligase_A_C	PF04679.10	gi|568163484|ref|YP_008946839.1|	-	4.4e-26	91.1	0.0	9.2e-26	90.0	0.0	1.6	1	0	0	1	1	1	1	ATP	dependent	DNA	ligase	C	terminal	region
DNA_ligase_OB_2	PF14743.1	gi|568163484|ref|YP_008946839.1|	-	0.072	12.7	0.4	3.4	7.3	0.0	2.8	3	0	0	3	3	3	0	DNA	ligase	OB-like	domain
dUTPase	PF00692.14	gi|568163485|ref|YP_008946840.1|	-	3.3e-22	78.3	0.0	4.3e-22	77.9	0.0	1.1	1	0	0	1	1	1	1	dUTPase
DCD	PF06559.6	gi|568163485|ref|YP_008946840.1|	-	6.6e-07	28.0	0.0	1.4e-05	23.6	0.0	2.4	2	1	0	2	2	2	2	2'-deoxycytidine	5'-triphosphate	deaminase	(DCD)
RHH_1	PF01402.16	gi|568163486|ref|YP_008946841.1|	-	0.00033	20.3	0.3	0.00033	20.3	0.2	3.0	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
Matrilin_ccoil	PF10393.4	gi|568163486|ref|YP_008946841.1|	-	0.087	12.2	6.5	0.068	12.5	0.8	3.2	2	1	1	3	3	3	0	Trimeric	coiled-coil	oligomerisation	domain	of	matrilin
STN1_2	PF09170.5	gi|568163486|ref|YP_008946841.1|	-	0.27	10.9	8.7	0.21	11.3	4.7	1.9	1	1	0	1	1	1	0	CST,	Suppressor	of	cdc	thirteen	homolog,	complex	subunit	STN1
Transpep_BrtH	PF14399.1	gi|568163486|ref|YP_008946841.1|	-	0.44	9.7	4.1	7.5	5.7	2.8	2.2	1	1	0	1	1	1	0	NlpC/p60-like	transpeptidase
DUF972	PF06156.8	gi|568163486|ref|YP_008946841.1|	-	0.46	10.8	11.6	0.43	10.9	4.4	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF972)
DUF1664	PF07889.7	gi|568163486|ref|YP_008946841.1|	-	1	9.1	7.2	0.36	10.6	1.8	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1664)
Prominin	PF05478.6	gi|568163486|ref|YP_008946841.1|	-	1.6	6.1	6.6	0.48	7.9	2.1	1.6	1	1	1	2	2	2	0	Prominin
SPX	PF03105.14	gi|568163486|ref|YP_008946841.1|	-	1.9	8.2	21.3	1.1	9.0	13.4	1.5	1	1	0	1	1	1	0	SPX	domain
Peptidase_S46	PF10459.4	gi|568163486|ref|YP_008946841.1|	-	2.4	6.4	12.5	2.9	6.1	8.7	1.0	1	0	0	1	1	1	0	Peptidase	S46
RP-C_C	PF11800.3	gi|568163486|ref|YP_008946841.1|	-	3.1	7.4	10.0	5.2	6.7	6.9	1.5	1	1	0	1	1	1	0	Replication	protein	C	C-terminal	region
DUF106	PF01956.11	gi|568163486|ref|YP_008946841.1|	-	7.7	6.0	15.3	3	7.3	4.3	2.4	2	1	0	2	2	2	0	Integral	membrane	protein	DUF106
DUF2203	PF09969.4	gi|568163486|ref|YP_008946841.1|	-	8.7	6.5	13.0	2.2	8.5	3.1	2.7	1	1	2	3	3	3	0	Uncharacterized	conserved	protein	(DUF2203)
Thioredoxin_3	PF13192.1	gi|568163487|ref|YP_008946842.1|	-	1e-28	98.9	1.8	1.4e-16	60.0	1.0	2.3	2	0	0	2	2	2	2	Thioredoxin	domain
Thioredoxin	PF00085.15	gi|568163487|ref|YP_008946842.1|	-	2.9e-05	23.6	1.0	0.0048	16.5	0.2	2.3	2	0	0	2	2	2	2	Thioredoxin
Glutaredoxin	PF00462.19	gi|568163487|ref|YP_008946842.1|	-	3.8e-05	23.5	3.8	0.16	11.9	1.1	3.1	2	2	0	2	2	2	2	Glutaredoxin
Thioredoxin_2	PF13098.1	gi|568163487|ref|YP_008946842.1|	-	4e-05	23.7	7.3	0.042	14.0	0.6	3.9	2	2	0	2	2	2	2	Thioredoxin-like	domain
DUF836	PF05768.9	gi|568163487|ref|YP_008946842.1|	-	0.0027	17.9	0.2	2.2	8.5	0.0	2.4	2	0	0	2	2	2	2	Glutaredoxin-like	domain	(DUF836)
Thioredoxin_7	PF13899.1	gi|568163487|ref|YP_008946842.1|	-	0.0061	16.5	0.3	0.7	9.9	0.0	2.5	2	0	0	2	2	2	1	Thioredoxin-like
PDDEXK_1	PF12705.2	gi|568163487|ref|YP_008946842.1|	-	0.0086	15.4	0.1	0.78	9.0	0.0	2.2	2	0	0	2	2	2	1	PD-(D/E)XK	nuclease	superfamily
TrbC_Ftype	PF09673.5	gi|568163487|ref|YP_008946842.1|	-	0.014	14.9	0.1	0.92	9.1	0.0	2.4	2	0	0	2	2	2	0	Type-F	conjugative	transfer	system	pilin	assembly	protein
Thioredoxin_8	PF13905.1	gi|568163487|ref|YP_008946842.1|	-	0.018	15.1	0.0	9.4	6.4	0.0	3.0	2	1	0	2	2	2	0	Thioredoxin-like
Thioredoxin_4	PF13462.1	gi|568163487|ref|YP_008946842.1|	-	0.056	13.4	7.9	0.5	10.3	0.1	3.6	2	2	2	4	4	4	0	Thioredoxin
DSBA	PF01323.15	gi|568163487|ref|YP_008946842.1|	-	0.079	12.5	0.8	2.3	7.7	0.0	2.7	2	2	0	2	2	2	0	DSBA-like	thioredoxin	domain
AMMECR1	PF01871.12	gi|568163488|ref|YP_008946843.1|	-	1.5e-57	193.4	0.0	1.8e-57	193.1	0.0	1.0	1	0	0	1	1	1	1	AMMECR1
Mut7-C	PF01927.11	gi|568163489|ref|YP_008946844.1|	-	2.6e-39	134.5	8.1	6.8e-38	129.9	5.6	2.0	1	1	0	1	1	1	1	Mut7-C	RNAse	domain
OrfB_Zn_ribbon	PF07282.6	gi|568163489|ref|YP_008946844.1|	-	0.006	16.2	0.4	0.022	14.4	0.2	1.9	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
E6	PF00518.12	gi|568163489|ref|YP_008946844.1|	-	0.0085	16.4	1.6	0.013	15.8	1.1	1.3	1	0	0	1	1	1	1	Early	Protein	(E6)
C1_1	PF00130.17	gi|568163489|ref|YP_008946844.1|	-	0.047	13.4	1.4	0.085	12.6	1.0	1.4	1	0	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
Mu-like_Com	PF10122.4	gi|568163489|ref|YP_008946844.1|	-	0.16	11.0	2.9	0.34	9.9	2.0	1.5	1	0	0	1	1	1	0	Mu-like	prophage	protein	Com
Rep_fac-A_C	PF08646.5	gi|568163489|ref|YP_008946844.1|	-	0.22	11.1	6.7	0.25	11.0	4.4	1.4	1	1	0	1	1	1	0	Replication	factor-A	C	terminal	domain
PHD_2	PF13831.1	gi|568163489|ref|YP_008946844.1|	-	0.91	8.8	8.2	0.18	11.1	2.4	2.2	2	0	0	2	2	2	0	PHD-finger
A2L_zn_ribbon	PF08792.5	gi|568163489|ref|YP_008946844.1|	-	2.5	7.6	5.5	12	5.5	0.2	2.6	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
PgaD	PF13994.1	gi|568163490|ref|YP_008946845.1|	-	0.28	10.6	3.9	0.34	10.3	2.7	1.1	1	0	0	1	1	1	0	PgaD-like	protein
COPI_assoc	PF08507.5	gi|568163490|ref|YP_008946845.1|	-	1.2	8.8	11.2	1.8	8.2	7.8	1.3	1	1	0	1	1	1	0	COPI	associated	protein
DUF308	PF03729.8	gi|568163490|ref|YP_008946845.1|	-	3.6	7.6	12.3	5.5	7.0	8.5	1.3	1	1	0	1	1	1	0	Short	repeat	of	unknown	function	(DUF308)
FbpA	PF05833.6	gi|568163491|ref|YP_008946846.1|	-	6.5e-32	110.6	22.0	1e-31	110.0	15.3	1.2	1	0	0	1	1	1	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
DUF814	PF05670.8	gi|568163491|ref|YP_008946846.1|	-	1.9e-24	85.3	0.0	5.7e-24	83.8	0.0	1.9	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF814)
HrpB7	PF09486.5	gi|568163491|ref|YP_008946846.1|	-	0.014	15.3	0.4	0.5	10.2	0.0	2.2	2	0	0	2	2	2	0	Bacterial	type	III	secretion	protein	(HrpB7)
Apolipoprotein	PF01442.13	gi|568163491|ref|YP_008946846.1|	-	0.017	14.6	4.6	0.93	8.9	0.6	2.3	2	0	0	2	2	2	0	Apolipoprotein	A1/A4/E	domain
P22_AR_C	PF10548.4	gi|568163491|ref|YP_008946846.1|	-	0.019	14.8	0.4	0.081	12.8	0.3	2.1	1	0	0	1	1	1	0	P22AR	C-terminal	domain
Tektin	PF03148.9	gi|568163491|ref|YP_008946846.1|	-	0.13	10.7	12.6	0.3	9.6	8.7	1.5	1	1	0	1	1	1	0	Tektin	family
PspA_IM30	PF04012.7	gi|568163491|ref|YP_008946846.1|	-	0.18	11.1	14.1	0.091	12.0	2.4	2.4	2	0	0	2	2	2	0	PspA/IM30	family
Phosphodiest	PF01663.17	gi|568163491|ref|YP_008946846.1|	-	0.19	11.0	2.1	0.25	10.6	0.7	1.7	1	1	0	1	1	1	0	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
Fib_alpha	PF08702.5	gi|568163491|ref|YP_008946846.1|	-	0.27	11.3	14.6	1.4	8.9	7.1	2.7	1	1	1	2	2	2	0	Fibrinogen	alpha/beta	chain	family
SSFA2_C	PF14723.1	gi|568163491|ref|YP_008946846.1|	-	0.28	10.8	1.6	0.48	10.1	1.1	1.3	1	0	0	1	1	1	0	Sperm-specific	antigen	2	C-terminus
Glyco_trans_1_2	PF13524.1	gi|568163491|ref|YP_008946846.1|	-	0.34	11.2	2.2	5	7.4	0.0	3.8	3	2	0	3	3	3	0	Glycosyl	transferases	group	1
DUF4164	PF13747.1	gi|568163491|ref|YP_008946846.1|	-	2.1	8.5	10.8	7.5	6.7	1.0	3.5	4	0	0	4	4	3	0	Domain	of	unknown	function	(DUF4164)
Syntaxin-6_N	PF09177.6	gi|568163491|ref|YP_008946846.1|	-	2.4	8.6	15.3	1.3	9.4	0.6	3.1	3	0	0	3	3	2	0	Syntaxin	6,	N-terminal
DUF607	PF04678.8	gi|568163491|ref|YP_008946846.1|	-	2.4	8.0	9.9	3.3	7.6	1.4	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function,	DUF607
AKNA	PF12443.3	gi|568163491|ref|YP_008946846.1|	-	2.8	8.0	5.5	13	5.8	0.2	2.7	2	0	0	2	2	2	0	AT-hook-containing	transcription	factor
RIO1	PF01163.17	gi|568163492|ref|YP_008946847.1|	-	3e-35	121.2	0.1	4.1e-35	120.8	0.1	1.2	1	0	0	1	1	1	1	RIO1	family
Rio2_N	PF09202.6	gi|568163492|ref|YP_008946847.1|	-	0.00016	21.6	0.1	0.00037	20.5	0.1	1.6	1	0	0	1	1	1	1	Rio2,	N-terminal
APH	PF01636.18	gi|568163492|ref|YP_008946847.1|	-	0.00084	19.1	0.0	0.0014	18.3	0.0	1.5	1	1	1	2	2	2	1	Phosphotransferase	enzyme	family
Pkinase	PF00069.20	gi|568163492|ref|YP_008946847.1|	-	0.00086	18.5	0.1	0.0014	17.8	0.1	1.3	1	0	0	1	1	1	1	Protein	kinase	domain
Choline_kinase	PF01633.15	gi|568163492|ref|YP_008946847.1|	-	0.031	13.8	1.8	0.16	11.4	1.2	2.1	1	1	0	1	1	1	0	Choline/ethanolamine	kinase
HTH_5	PF01022.15	gi|568163492|ref|YP_008946847.1|	-	0.11	12.1	0.4	0.34	10.5	0.1	1.9	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
DUF460	PF04312.8	gi|568163493|ref|YP_008946848.1|	-	6.1e-51	171.5	0.3	1.2e-50	170.6	0.2	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF460)
BRCT	PF00533.21	gi|568163493|ref|YP_008946848.1|	-	0.04	14.0	1.1	4.1	7.6	0.0	3.8	3	2	1	4	4	4	0	BRCA1	C	Terminus	(BRCT)	domain
SlyX	PF04102.7	gi|568163493|ref|YP_008946848.1|	-	0.085	13.2	7.2	0.27	11.6	1.5	2.7	2	0	0	2	2	2	0	SlyX
V-SNARE	PF05008.10	gi|568163493|ref|YP_008946848.1|	-	0.1	12.7	12.6	1.8	8.7	0.1	4.8	4	0	0	4	4	4	0	Vesicle	transport	v-SNARE	protein	N-terminus
MCC-bdg_PDZ	PF10506.4	gi|568163493|ref|YP_008946848.1|	-	0.98	9.3	4.6	0.94	9.3	0.9	2.3	2	0	0	2	2	2	0	PDZ	domain	of	MCC-2	bdg	protein	for	Usher	syndrome
TPR_MLP1_2	PF07926.7	gi|568163493|ref|YP_008946848.1|	-	1.8	8.2	12.3	0.32	10.7	2.9	2.8	2	1	0	2	2	2	0	TPR/MLP1/MLP2-like	protein
AdoMet_Synthase	PF01941.14	gi|568163494|ref|YP_008946849.1|	-	2.9e-171	569.3	4.9	3.3e-171	569.1	3.4	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	synthetase	(AdoMet	synthetase)
LSM	PF01423.17	gi|568163495|ref|YP_008946850.1|	-	5.8e-20	70.6	0.1	7e-20	70.3	0.1	1.1	1	0	0	1	1	1	1	LSM	domain
SM-ATX	PF14438.1	gi|568163495|ref|YP_008946850.1|	-	0.051	13.5	0.0	0.067	13.1	0.0	1.2	1	0	0	1	1	1	0	Ataxin	2	SM	domain
HTH_5	PF01022.15	gi|568163496|ref|YP_008946851.1|	-	2.2e-12	46.4	0.1	4e-12	45.5	0.1	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|568163496|ref|YP_008946851.1|	-	5.9e-10	38.8	0.0	8.3e-10	38.3	0.0	1.1	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|568163496|ref|YP_008946851.1|	-	1.3e-08	34.0	0.0	1.9e-08	33.5	0.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.17	gi|568163496|ref|YP_008946851.1|	-	7.5e-08	31.9	0.1	1.3e-07	31.2	0.1	1.4	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.2	gi|568163496|ref|YP_008946851.1|	-	3.7e-07	29.7	0.0	5.4e-07	29.1	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_34	PF13601.1	gi|568163496|ref|YP_008946851.1|	-	6.5e-07	29.3	0.2	1.1e-06	28.6	0.1	1.5	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|568163496|ref|YP_008946851.1|	-	4e-06	26.4	0.1	6.7e-06	25.7	0.1	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_27	PF13463.1	gi|568163496|ref|YP_008946851.1|	-	8.8e-05	22.7	0.0	0.00015	22.0	0.0	1.4	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_Crp_2	PF13545.1	gi|568163496|ref|YP_008946851.1|	-	0.00073	19.2	0.0	0.0013	18.5	0.0	1.6	1	1	1	2	2	2	1	Crp-like	helix-turn-helix	domain
DUF742	PF05331.6	gi|568163496|ref|YP_008946851.1|	-	0.0044	16.6	0.0	0.0051	16.3	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF742)
HTH_IclR	PF09339.5	gi|568163496|ref|YP_008946851.1|	-	0.0044	16.5	0.0	0.007	15.9	0.0	1.4	1	1	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_11	PF08279.7	gi|568163496|ref|YP_008946851.1|	-	0.0055	16.3	0.0	0.0084	15.7	0.0	1.4	1	0	0	1	1	1	1	HTH	domain
ArsR	PF09824.4	gi|568163496|ref|YP_008946851.1|	-	0.0057	15.9	0.1	0.0066	15.7	0.1	1.0	1	0	0	1	1	1	1	ArsR	transcriptional	regulator
Fe_dep_repress	PF01325.14	gi|568163496|ref|YP_008946851.1|	-	0.0063	16.4	0.0	0.011	15.5	0.0	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DUF2513	PF10711.4	gi|568163496|ref|YP_008946851.1|	-	0.022	14.8	0.1	0.025	14.6	0.0	1.2	1	0	0	1	1	1	0	Hypothetical	protein	(DUF2513)
Cdc6_C	PF09079.6	gi|568163496|ref|YP_008946851.1|	-	0.024	14.3	0.1	0.048	13.3	0.0	1.6	1	1	0	1	1	1	0	CDC6,	C	terminal
Phage_rep_org_N	PF09681.5	gi|568163496|ref|YP_008946851.1|	-	0.026	14.1	0.4	0.14	11.7	0.1	1.8	1	1	1	2	2	2	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
TFIIE_alpha	PF02002.12	gi|568163496|ref|YP_008946851.1|	-	0.031	13.7	0.3	0.056	12.9	0.2	1.6	1	1	0	1	1	1	0	TFIIE	alpha	subunit
HTH_1	PF00126.22	gi|568163496|ref|YP_008946851.1|	-	0.04	13.6	0.0	0.057	13.1	0.0	1.2	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
Rrf2	PF02082.15	gi|568163496|ref|YP_008946851.1|	-	0.047	13.8	0.1	0.062	13.4	0.1	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
PadR	PF03551.9	gi|568163496|ref|YP_008946851.1|	-	0.049	13.4	0.0	0.08	12.7	0.0	1.4	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
DUF2250	PF10007.4	gi|568163496|ref|YP_008946851.1|	-	0.051	13.4	0.4	0.065	13.1	0.3	1.3	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
PGP_phosphatase	PF09419.5	gi|568163496|ref|YP_008946851.1|	-	0.079	12.3	0.0	0.09	12.1	0.0	1.2	1	0	0	1	1	1	0	Mitochondrial	PGP	phosphatase
HTH_CodY	PF08222.6	gi|568163496|ref|YP_008946851.1|	-	0.094	12.0	0.1	0.14	11.5	0.0	1.4	1	0	0	1	1	1	0	CodY	helix-turn-helix	domain
Sulfolobus_pRN	PF05584.6	gi|568163496|ref|YP_008946851.1|	-	0.1	12.6	0.1	0.14	12.1	0.1	1.3	1	0	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
DUF4423	PF14394.1	gi|568163496|ref|YP_008946851.1|	-	0.11	12.0	0.2	0.24	10.9	0.1	1.5	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4423)
GntR	PF00392.16	gi|568163496|ref|YP_008946851.1|	-	0.11	11.9	0.0	0.16	11.4	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
HTH_36	PF13730.1	gi|568163496|ref|YP_008946851.1|	-	0.13	12.4	0.0	0.22	11.6	0.0	1.6	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_41	PF14502.1	gi|568163496|ref|YP_008946851.1|	-	0.14	11.8	0.1	0.3	10.7	0.0	1.7	1	1	1	2	2	2	0	Helix-turn-helix	domain
CTP_synth_N	PF06418.9	gi|568163497|ref|YP_008946852.1|	-	4.8e-126	419.4	1.8	6.6e-126	419.0	1.2	1.2	1	0	0	1	1	1	1	CTP	synthase	N-terminus
GATase	PF00117.23	gi|568163497|ref|YP_008946852.1|	-	3.5e-51	173.4	0.0	5.9e-51	172.6	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|568163497|ref|YP_008946852.1|	-	1.6e-11	44.0	0.0	3.1e-11	43.1	0.0	1.4	1	0	0	1	1	1	1	Peptidase	C26
CbiA	PF01656.18	gi|568163497|ref|YP_008946852.1|	-	2.2e-07	30.4	0.0	4.7e-07	29.4	0.0	1.6	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ArsA_ATPase	PF02374.10	gi|568163497|ref|YP_008946852.1|	-	0.027	13.5	0.9	1.7	7.6	0.1	2.4	2	1	0	2	2	2	0	Anion-transporting	ATPase
OMPdecase	PF00215.19	gi|568163498|ref|YP_008946853.1|	-	4.5e-19	68.7	5.0	8.5e-19	67.8	3.5	1.4	1	1	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
QRPTase_C	PF01729.14	gi|568163498|ref|YP_008946853.1|	-	0.00054	19.5	1.8	0.001	18.6	0.8	1.9	1	1	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
Ribul_P_3_epim	PF00834.14	gi|568163498|ref|YP_008946853.1|	-	0.0042	16.2	1.2	0.0071	15.4	0.1	1.9	2	1	0	2	2	2	1	Ribulose-phosphate	3	epimerase	family
IGPS	PF00218.16	gi|568163498|ref|YP_008946853.1|	-	0.011	14.8	1.6	0.019	14.0	1.1	1.5	1	0	0	1	1	1	0	Indole-3-glycerol	phosphate	synthase
HDPD	PF02924.9	gi|568163498|ref|YP_008946853.1|	-	0.12	12.1	1.7	0.51	10.1	1.2	2.0	1	1	0	1	1	1	0	Bacteriophage	lambda	head	decoration	protein	D
DUF1128	PF06569.6	gi|568163499|ref|YP_008946854.1|	-	0.28	10.9	5.8	0.71	9.6	0.0	3.1	4	1	0	4	4	4	0	Protein	of	unknown	function	(DUF1128)
DUF2153	PF09921.4	gi|568163500|ref|YP_008946855.1|	-	1.2e-48	163.8	3.3	1.3e-48	163.7	2.3	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2153)
AATF-Che1	PF13339.1	gi|568163500|ref|YP_008946855.1|	-	0.038	14.1	0.8	0.07	13.2	0.1	1.6	1	1	1	2	2	2	0	Apoptosis	antagonizing	transcription	factor
OSCP	PF00213.13	gi|568163500|ref|YP_008946855.1|	-	0.13	12.1	0.1	0.16	11.8	0.1	1.3	1	0	0	1	1	1	0	ATP	synthase	delta	(OSCP)	subunit
Trm112p	PF03966.11	gi|568163501|ref|YP_008946856.1|	-	6.9e-17	61.5	2.9	1.2e-16	60.8	2.0	1.4	1	0	0	1	1	1	1	Trm112p-like	protein
zf-UDP	PF14569.1	gi|568163501|ref|YP_008946856.1|	-	0.0088	15.7	0.6	0.0088	15.7	0.4	1.9	1	1	0	2	2	2	1	Zinc-binding	RING-finger
zf-RING_5	PF14634.1	gi|568163501|ref|YP_008946856.1|	-	1.5	8.6	4.9	6	6.6	0.6	2.6	2	0	0	2	2	2	0	zinc-RING	finger	domain
Sgf11	PF08209.6	gi|568163501|ref|YP_008946856.1|	-	1.5	8.1	4.9	1.5	8.2	0.1	2.7	3	0	0	3	3	3	0	Sgf11	(transcriptional	regulation	protein)
DZR	PF12773.2	gi|568163501|ref|YP_008946856.1|	-	2.8	7.8	6.7	15	5.5	4.7	2.1	1	1	0	1	1	1	0	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|568163501|ref|YP_008946856.1|	-	3.4	6.9	7.4	1.7	7.9	0.7	2.6	2	1	0	2	2	2	0	zinc-ribbon	domain
zf-RING_4	PF14570.1	gi|568163501|ref|YP_008946856.1|	-	7.4	6.2	12.1	1.7	8.2	3.7	2.6	3	0	0	3	3	3	0	RING/Ubox	like	zinc-binding	domain
PHD	PF00628.24	gi|568163501|ref|YP_008946856.1|	-	9	6.0	8.4	0.8	9.4	0.7	2.5	1	1	0	2	2	2	0	PHD-finger
PGM_PMM_I	PF02878.11	gi|568163502|ref|YP_008946857.1|	-	4.3e-42	142.8	0.0	7.9e-42	142.0	0.0	1.5	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_II	PF02879.11	gi|568163502|ref|YP_008946857.1|	-	5.7e-21	74.7	0.0	1.2e-20	73.8	0.0	1.5	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_III	PF02880.11	gi|568163502|ref|YP_008946857.1|	-	3.2e-17	62.5	0.0	5.8e-17	61.7	0.0	1.4	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_IV	PF00408.15	gi|568163502|ref|YP_008946857.1|	-	4.2e-11	42.6	0.1	1.4e-10	40.9	0.0	1.9	2	0	0	2	2	2	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
DUF2007	PF09413.5	gi|568163502|ref|YP_008946857.1|	-	0.12	12.2	0.0	0.29	10.9	0.0	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF2007)
Glycos_transf_1	PF00534.15	gi|568163503|ref|YP_008946858.1|	-	1.8e-28	99.1	0.4	2.9e-28	98.4	0.3	1.2	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|568163503|ref|YP_008946858.1|	-	1.4e-18	67.2	0.0	2.1e-18	66.6	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_4_4	PF13579.1	gi|568163503|ref|YP_008946858.1|	-	5.2e-14	52.7	0.0	8.7e-13	48.7	0.0	2.2	1	1	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_1_4	PF13692.1	gi|568163503|ref|YP_008946858.1|	-	9.2e-08	32.3	0.0	1.6e-07	31.5	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|568163503|ref|YP_008946858.1|	-	2.1e-05	24.6	0.0	4e-05	23.8	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Nit_Regul_Hom	PF10126.4	gi|568163503|ref|YP_008946858.1|	-	0.067	12.9	0.1	5.6	6.7	0.0	2.5	2	0	0	2	2	2	0	Uncharacterized	protein,	homolog	of	nitrogen	regulatory	protein	PII
MTS	PF05175.9	gi|568163504|ref|YP_008946859.1|	-	2.1e-34	118.3	0.0	2.4e-34	118.1	0.0	1.0	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.1	gi|568163504|ref|YP_008946859.1|	-	5.9e-12	45.4	0.1	8.1e-12	44.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|568163504|ref|YP_008946859.1|	-	1.6e-08	35.1	0.0	2.2e-08	34.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|568163504|ref|YP_008946859.1|	-	8.6e-08	32.2	0.0	1.2e-07	31.7	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
GidB	PF02527.10	gi|568163504|ref|YP_008946859.1|	-	1.4e-07	30.8	0.1	1.7e-07	30.5	0.0	1.3	1	0	0	1	1	1	1	rRNA	small	subunit	methyltransferase	G
PrmA	PF06325.8	gi|568163504|ref|YP_008946859.1|	-	4.5e-07	29.2	0.0	5e-07	29.1	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Met_10	PF02475.11	gi|568163504|ref|YP_008946859.1|	-	4.5e-06	26.3	0.2	5.1e-06	26.2	0.1	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_15	PF09445.5	gi|568163504|ref|YP_008946859.1|	-	5.1e-06	26.1	0.4	6.6e-06	25.7	0.3	1.4	1	1	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
FmrO	PF07091.6	gi|568163504|ref|YP_008946859.1|	-	2.1e-05	23.6	0.0	3.1e-05	23.0	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	methyltransferase	(FmrO)
DUF633	PF04816.7	gi|568163504|ref|YP_008946859.1|	-	5.4e-05	22.6	0.1	7.6e-05	22.1	0.1	1.2	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF633)
Cons_hypoth95	PF03602.10	gi|568163504|ref|YP_008946859.1|	-	6.1e-05	22.4	0.0	7e-05	22.2	0.0	1.1	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltransf_16	PF10294.4	gi|568163504|ref|YP_008946859.1|	-	9.4e-05	21.9	0.0	0.00015	21.2	0.0	1.2	1	0	0	1	1	1	1	Putative	methyltransferase
Methyltransf_4	PF02390.12	gi|568163504|ref|YP_008946859.1|	-	0.00013	21.0	0.0	0.0002	20.4	0.0	1.2	1	0	0	1	1	1	1	Putative	methyltransferase
rRNA_methylase	PF06962.7	gi|568163504|ref|YP_008946859.1|	-	0.00015	21.4	0.5	0.068	12.8	0.0	2.2	2	0	0	2	2	2	2	Putative	rRNA	methylase
DUF43	PF01861.11	gi|568163504|ref|YP_008946859.1|	-	0.0003	19.8	0.0	0.00045	19.2	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF43
Methyltransf_12	PF08242.7	gi|568163504|ref|YP_008946859.1|	-	0.00038	20.8	0.0	0.00055	20.3	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|568163504|ref|YP_008946859.1|	-	0.00045	19.8	0.0	0.00053	19.5	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_25	PF13649.1	gi|568163504|ref|YP_008946859.1|	-	0.00047	20.4	0.0	0.00072	19.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_5	PF01795.14	gi|568163504|ref|YP_008946859.1|	-	0.0037	16.6	0.0	0.0077	15.5	0.0	1.5	2	0	0	2	2	2	1	MraW	methylase	family
Methyltransf_23	PF13489.1	gi|568163504|ref|YP_008946859.1|	-	0.0052	16.5	0.0	0.0091	15.7	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|568163504|ref|YP_008946859.1|	-	0.0094	16.4	0.0	0.018	15.5	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
TehB	PF03848.9	gi|568163504|ref|YP_008946859.1|	-	0.0096	15.1	0.1	0.02	14.0	0.0	1.5	2	0	0	2	2	2	1	Tellurite	resistance	protein	TehB
CMAS	PF02353.15	gi|568163504|ref|YP_008946859.1|	-	0.026	13.6	0.0	0.031	13.3	0.0	1.2	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
Methyltransf_32	PF13679.1	gi|568163504|ref|YP_008946859.1|	-	0.097	12.3	0.0	0.13	11.9	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
PUA	PF01472.15	gi|568163505|ref|YP_008946860.1|	-	5.2e-15	54.9	0.0	1.2e-14	53.7	0.0	1.6	2	0	0	2	2	2	1	PUA	domain
TruB_N	PF01509.13	gi|568163505|ref|YP_008946860.1|	-	5.6e-08	33.0	0.1	3.2e-06	27.3	0.1	2.8	1	1	0	1	1	1	1	TruB	family	pseudouridylate	synthase	(N	terminal	domain)
Methyltrans_Mon	PF14314.1	gi|568163505|ref|YP_008946860.1|	-	0.013	13.3	0.0	0.018	12.9	0.0	1.2	1	0	0	1	1	1	0	Virus-capping	methyltransferase
DKCLD	PF08068.7	gi|568163506|ref|YP_008946861.1|	-	2.7e-15	56.0	0.0	3.5e-15	55.6	0.0	1.2	1	0	0	1	1	1	1	DKCLD	(NUC011)	domain
TruB_N	PF01509.13	gi|568163506|ref|YP_008946861.1|	-	0.082	13.0	0.1	0.15	12.2	0.0	1.4	2	0	0	2	2	2	0	TruB	family	pseudouridylate	synthase	(N	terminal	domain)
KOW	PF00467.24	gi|568163507|ref|YP_008946862.1|	-	6.1e-05	22.5	1.0	6.1e-05	22.5	0.7	1.9	2	1	0	2	2	2	1	KOW	motif
Ribosomal_L14e	PF01929.12	gi|568163507|ref|YP_008946862.1|	-	0.00093	19.5	0.1	0.0014	18.9	0.1	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L14
XisI	PF08869.6	gi|568163507|ref|YP_008946862.1|	-	0.045	13.8	0.1	0.054	13.6	0.0	1.1	1	0	0	1	1	1	0	XisI	protein
DEAD	PF00270.24	gi|568163508|ref|YP_008946863.1|	-	1.3e-31	109.4	0.1	3.3e-31	108.0	0.0	1.8	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
DEAD_assoc	PF08494.6	gi|568163508|ref|YP_008946863.1|	-	9.1e-30	103.7	0.0	1.8e-29	102.8	0.0	1.5	1	0	0	1	1	1	1	DEAD/H	associated
Helicase_C	PF00271.26	gi|568163508|ref|YP_008946863.1|	-	2.4e-18	65.7	0.3	1.4e-15	56.9	0.0	3.2	3	0	0	3	3	3	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|568163508|ref|YP_008946863.1|	-	0.0033	17.2	0.0	0.0096	15.7	0.0	1.8	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
C-C_Bond_Lyase	PF15617.1	gi|568163508|ref|YP_008946863.1|	-	0.021	13.6	0.0	0.12	11.1	0.0	2.2	2	1	1	3	3	3	0	C-C_Bond_Lyase	of	the	TIM-Barrel	fold
SNF2_N	PF00176.18	gi|568163508|ref|YP_008946863.1|	-	0.023	13.5	0.0	0.042	12.6	0.0	1.4	1	0	0	1	1	1	0	SNF2	family	N-terminal	domain
DUF3753	PF12575.3	gi|568163508|ref|YP_008946863.1|	-	0.047	13.4	0.4	0.15	11.9	0.3	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3753)
PrpR_N	PF06506.6	gi|568163508|ref|YP_008946863.1|	-	0.074	12.4	0.1	0.27	10.6	0.0	2.0	2	0	0	2	2	2	0	Propionate	catabolism	activator
AAA_10	PF12846.2	gi|568163509|ref|YP_008946864.1|	-	7e-27	94.6	0.5	1.1e-26	94.0	0.3	1.3	1	1	0	1	1	1	1	AAA-like	domain
DUF87	PF01935.12	gi|568163509|ref|YP_008946864.1|	-	1e-07	32.0	2.2	1.6e-06	28.1	1.5	2.3	1	1	0	1	1	1	1	Domain	of	unknown	function	DUF87
AAA_17	PF13207.1	gi|568163509|ref|YP_008946864.1|	-	1.5e-05	25.7	0.4	4.7e-05	24.2	0.2	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|568163509|ref|YP_008946864.1|	-	4.6e-05	23.5	0.0	0.36	10.9	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_18	PF13238.1	gi|568163509|ref|YP_008946864.1|	-	0.00027	21.2	1.0	0.0015	18.8	0.7	2.4	1	1	0	1	1	1	1	AAA	domain
TrwB_AAD_bind	PF10412.4	gi|568163509|ref|YP_008946864.1|	-	0.00069	18.3	0.0	0.098	11.2	0.0	2.2	2	0	0	2	2	2	2	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
ABC_tran	PF00005.22	gi|568163509|ref|YP_008946864.1|	-	0.0047	17.2	0.1	0.01	16.1	0.1	1.5	1	0	0	1	1	1	1	ABC	transporter
AAA_5	PF07728.9	gi|568163509|ref|YP_008946864.1|	-	0.0066	16.1	0.0	0.013	15.2	0.0	1.5	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_29	PF13555.1	gi|568163509|ref|YP_008946864.1|	-	0.0095	15.4	0.3	0.02	14.3	0.2	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
DUF3439	PF11921.3	gi|568163509|ref|YP_008946864.1|	-	0.029	14.1	0.0	0.055	13.2	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3439)
DUF258	PF03193.11	gi|568163509|ref|YP_008946864.1|	-	0.043	12.9	0.1	0.084	12.0	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA	PF00004.24	gi|568163509|ref|YP_008946864.1|	-	0.049	13.8	0.1	0.21	11.8	0.0	2.0	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.1	gi|568163509|ref|YP_008946864.1|	-	0.057	13.3	0.0	0.11	12.4	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_24	PF13479.1	gi|568163509|ref|YP_008946864.1|	-	0.061	12.8	0.1	0.14	11.7	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|568163509|ref|YP_008946864.1|	-	0.18	11.2	0.0	0.44	9.9	0.0	1.6	2	0	0	2	2	2	0	FtsK/SpoIIIE	family
RNA_pol_Rpo13	PF12136.3	gi|568163510|ref|YP_008946865.1|	-	3.1e-18	65.1	3.9	3.1e-18	65.1	2.7	2.7	3	0	0	3	3	3	1	RNA	polymerase	Rpo13	subunit	HTH	domain
UBN2_3	PF14244.1	gi|568163510|ref|YP_008946865.1|	-	0.062	12.8	0.1	0.086	12.4	0.1	1.3	1	0	0	1	1	1	0	gag-polypeptide	of	LTR	copia-type
PAP1	PF08601.5	gi|568163510|ref|YP_008946865.1|	-	1.3	8.6	7.6	0.071	12.7	1.0	1.8	1	1	1	2	2	2	0	Transcription	factor	PAP1
PCNA_C	PF02747.10	gi|568163511|ref|YP_008946866.1|	-	4.3e-06	26.6	0.9	0.00099	19.0	0.0	3.1	1	1	1	3	3	3	2	Proliferating	cell	nuclear	antigen,	C-terminal	domain
PCNA_N	PF00705.13	gi|568163511|ref|YP_008946866.1|	-	2.2e-05	23.9	0.7	0.00011	21.7	0.1	2.2	2	1	1	3	3	3	1	Proliferating	cell	nuclear	antigen,	N-terminal	domain
Rad9	PF04139.8	gi|568163511|ref|YP_008946866.1|	-	0.0012	18.0	0.5	0.0052	15.9	0.1	1.9	2	0	0	2	2	2	1	Rad9
Amidohydro_1	PF01979.15	gi|568163512|ref|YP_008946867.1|	-	9.1e-10	38.6	0.0	1.2e-08	35.0	0.0	2.0	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|568163512|ref|YP_008946867.1|	-	2.1e-07	31.2	0.0	8.6e-06	25.9	0.0	2.1	2	0	0	2	2	2	1	Amidohydrolase
Amidohydro_5	PF13594.1	gi|568163512|ref|YP_008946867.1|	-	0.0017	18.1	0.0	0.004	16.9	0.0	1.6	1	0	0	1	1	1	1	Amidohydrolase
Borrelia_lipo_1	PF05714.6	gi|568163512|ref|YP_008946867.1|	-	0.0037	16.3	0.6	0.0065	15.5	0.4	1.4	1	0	0	1	1	1	1	Borrelia	burgdorferi	virulent	strain	associated	lipoprotein
TEBP_beta	PF07404.6	gi|568163512|ref|YP_008946867.1|	-	0.12	11.4	0.1	1.1	8.3	0.0	1.9	2	0	0	2	2	2	0	Telomere-binding	protein	beta	subunit	(TEBP	beta)
GGDN	PF05165.7	gi|568163513|ref|YP_008946868.1|	-	7.1e-23	80.9	0.1	1.4e-10	40.6	0.1	2.0	1	1	1	2	2	2	2	GGDN	family
DMRL_synthase	PF00885.14	gi|568163514|ref|YP_008946869.1|	-	5.5e-39	133.1	0.9	6.4e-39	132.8	0.6	1.0	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
ADSL_C	PF10397.4	gi|568163514|ref|YP_008946869.1|	-	0.00013	21.8	0.1	0.00043	20.2	0.0	1.8	2	0	0	2	2	2	1	Adenylosuccinate	lyase	C-terminus
Metallophos_3	PF14582.1	gi|568163514|ref|YP_008946869.1|	-	0.062	12.4	0.7	1.3	8.0	0.1	2.1	1	1	1	2	2	2	0	Metallophosphoesterase,	calcineurin	superfamily
TOBE	PF03459.12	gi|568163514|ref|YP_008946869.1|	-	0.12	12.4	0.8	7.4	6.7	0.1	2.3	2	0	0	2	2	2	0	TOBE	domain
DMRL_synthase	PF00885.14	gi|568163515|ref|YP_008946870.1|	-	1.1e-14	54.3	0.1	1.2e-14	54.1	0.1	1.1	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
DHBP_synthase	PF00926.14	gi|568163516|ref|YP_008946871.1|	-	2.7e-51	173.5	0.0	3.3e-51	173.2	0.0	1.0	1	0	0	1	1	1	1	3,4-dihydroxy-2-butanone	4-phosphate	synthase
DUF2208	PF09973.4	gi|568163517|ref|YP_008946873.1|	-	1.1e-77	260.4	22.6	1.3e-77	260.2	15.7	1.0	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2208)
Rer1	PF03248.8	gi|568163517|ref|YP_008946873.1|	-	0.0065	16.0	2.8	0.0065	16.0	2.0	2.3	2	0	0	2	2	2	2	Rer1	family
Lung_7-TM_R	PF06814.8	gi|568163517|ref|YP_008946873.1|	-	0.0068	15.3	4.0	0.0068	15.3	2.8	2.1	2	0	0	2	2	2	1	Lung	seven	transmembrane	receptor
PDR_CDR	PF06422.7	gi|568163517|ref|YP_008946873.1|	-	0.073	12.7	5.2	0.068	12.8	0.8	2.3	2	0	0	2	2	2	0	CDR	ABC	transporter
BCL_N	PF04714.8	gi|568163517|ref|YP_008946873.1|	-	0.92	9.1	3.5	23	4.6	0.0	3.0	3	0	0	3	3	3	0	BCL7,	N-terminal	conserver	region
GATase_3	PF07685.9	gi|568163518|ref|YP_008946874.1|	-	9.5e-30	103.2	0.0	2.1e-29	102.1	0.0	1.5	2	0	0	2	2	2	1	CobB/CobQ-like	glutamine	amidotransferase	domain
AAA_26	PF13500.1	gi|568163518|ref|YP_008946874.1|	-	4.6e-14	52.4	0.0	1.3e-08	34.6	0.0	2.4	1	1	1	2	2	2	2	AAA	domain
CbiA	PF01656.18	gi|568163518|ref|YP_008946874.1|	-	6.1e-13	48.6	0.0	1.3e-12	47.5	0.0	1.5	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
PCNA_N	PF00705.13	gi|568163519|ref|YP_008946875.1|	-	3.5e-15	55.6	0.3	9.4e-15	54.2	0.0	1.7	2	0	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	N-terminal	domain
PCNA_C	PF02747.10	gi|568163519|ref|YP_008946875.1|	-	2.7e-10	40.2	1.0	6.9e-09	35.6	0.1	2.2	2	1	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	C-terminal	domain
Rad1	PF02144.11	gi|568163519|ref|YP_008946875.1|	-	3.7e-10	39.0	0.9	1.2e-05	24.2	0.0	2.1	1	1	0	2	2	2	2	Repair	protein	Rad1/Rec1/Rad17
Rad9	PF04139.8	gi|568163519|ref|YP_008946875.1|	-	1.1e-08	34.5	0.2	1.6e-08	33.9	0.1	1.2	1	0	0	1	1	1	1	Rad9
DNA_pol3_beta_3	PF02768.10	gi|568163519|ref|YP_008946875.1|	-	2	8.0	5.2	2.4	7.7	0.1	2.4	2	1	0	2	2	2	0	DNA	polymerase	III	beta	subunit,	C-terminal	domain
Meth_synt_1	PF08267.7	gi|568163520|ref|YP_008946876.1|	-	1.9e-45	155.5	5.3	7.8e-43	146.9	3.7	2.0	1	1	0	1	1	1	1	Cobalamin-independent	synthase,	N-terminal	domain
Meth_synt_2	PF01717.13	gi|568163520|ref|YP_008946876.1|	-	7.5e-13	48.1	0.0	2.1e-12	46.6	0.0	1.6	1	1	0	1	1	1	1	Cobalamin-independent	synthase,	Catalytic	domain
DUF2450	PF10475.4	gi|568163520|ref|YP_008946876.1|	-	0.0053	15.7	0.2	0.8	8.5	0.0	2.3	2	0	0	2	2	2	2	Protein	of	unknown	function	N-terminal	domain	(DUF2450)
DUF2150	PF09920.4	gi|568163520|ref|YP_008946876.1|	-	0.021	14.4	0.7	0.068	12.7	0.0	2.0	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2150)
Lipase_GDSL_2	PF13472.1	gi|568163520|ref|YP_008946876.1|	-	0.06	13.4	0.0	0.34	11.0	0.0	1.9	2	0	0	2	2	2	0	GDSL-like	Lipase/Acylhydrolase	family
Meth_synt_2	PF01717.13	gi|568163521|ref|YP_008946877.1|	-	2.1e-88	296.4	0.0	2.6e-88	296.1	0.0	1.0	1	0	0	1	1	1	1	Cobalamin-independent	synthase,	Catalytic	domain
Meth_synt_1	PF08267.7	gi|568163521|ref|YP_008946877.1|	-	1e-27	97.2	2.4	9.2e-22	77.6	1.7	2.1	2	0	0	2	2	2	2	Cobalamin-independent	synthase,	N-terminal	domain
Ribosomal_S13_N	PF08069.7	gi|568163522|ref|YP_008946878.1|	-	4.1e-24	84.1	0.2	1.1e-23	82.8	0.1	1.7	2	0	0	2	2	2	1	Ribosomal	S13/S15	N-terminal	domain
Ribosomal_S15	PF00312.17	gi|568163522|ref|YP_008946878.1|	-	1.2e-19	69.8	0.2	1.5e-19	69.5	0.1	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S15
DUF2408	PF10303.4	gi|568163522|ref|YP_008946878.1|	-	0.011	15.7	0.0	0.017	15.2	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2408)
LexA_DNA_bind	PF01726.11	gi|568163522|ref|YP_008946878.1|	-	0.13	11.8	0.0	0.39	10.3	0.0	1.8	1	0	0	1	1	1	0	LexA	DNA	binding	domain
CbiX	PF01903.12	gi|568163523|ref|YP_008946879.1|	-	2e-27	95.3	0.1	2.3e-27	95.1	0.0	1.0	1	0	0	1	1	1	1	CbiX
CbiK	PF06180.6	gi|568163523|ref|YP_008946879.1|	-	2e-05	23.8	0.0	2.3e-05	23.6	0.0	1.1	1	0	0	1	1	1	1	Cobalt	chelatase	(CbiK)
Ferrochelatase	PF00762.14	gi|568163523|ref|YP_008946879.1|	-	0.032	13.1	0.0	0.034	13.0	0.0	1.2	1	0	0	1	1	1	0	Ferrochelatase
CAT_RBD	PF03123.10	gi|568163523|ref|YP_008946879.1|	-	0.093	12.4	0.1	0.18	11.4	0.1	1.5	1	0	0	1	1	1	0	CAT	RNA	binding	domain
Ribosomal_S6e	PF01092.14	gi|568163524|ref|YP_008946880.1|	-	1.4e-19	69.9	2.0	7.7e-19	67.5	0.1	2.6	2	1	1	3	3	3	1	Ribosomal	protein	S6e
ATP-gua_Ptrans	PF00217.14	gi|568163524|ref|YP_008946880.1|	-	0.023	14.0	0.2	0.042	13.1	0.1	1.4	1	0	0	1	1	1	0	ATP:guanido	phosphotransferase,	C-terminal	catalytic	domain
GTP_EFTU	PF00009.22	gi|568163525|ref|YP_008946881.1|	-	4e-41	140.5	0.0	6.8e-41	139.7	0.0	1.4	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
eIF2_C	PF09173.6	gi|568163525|ref|YP_008946881.1|	-	1.5e-28	98.6	1.8	3.6e-28	97.4	1.2	1.7	1	0	0	1	1	1	1	Initiation	factor	eIF2	gamma,	C	terminal
GTP_EFTU_D2	PF03144.20	gi|568163525|ref|YP_008946881.1|	-	3.3e-08	33.5	0.2	3.5e-07	30.2	0.1	2.5	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.18	gi|568163525|ref|YP_008946881.1|	-	0.00025	21.0	0.0	0.0005	20.0	0.0	1.6	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
PduV-EutP	PF10662.4	gi|568163525|ref|YP_008946881.1|	-	0.0051	16.3	0.2	0.3	10.5	0.0	2.4	2	0	0	2	2	2	1	Ethanolamine	utilisation	-	propanediol	utilisation
MobB	PF03205.9	gi|568163525|ref|YP_008946881.1|	-	0.038	13.6	0.2	0.28	10.8	0.0	2.2	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Dynamin_N	PF00350.18	gi|568163525|ref|YP_008946881.1|	-	0.057	13.2	0.1	0.21	11.3	0.0	1.9	1	1	1	2	2	2	0	Dynamin	family
PIN	PF01850.16	gi|568163526|ref|YP_008946882.1|	-	3.1e-06	27.5	0.2	9e-06	26.0	0.1	1.7	1	1	0	1	1	1	1	PIN	domain
PIN_4	PF13638.1	gi|568163526|ref|YP_008946882.1|	-	1.2e-05	25.3	0.4	0.00073	19.6	0.3	2.0	1	1	0	1	1	1	1	PIN	domain
Fcf1	PF04900.7	gi|568163526|ref|YP_008946882.1|	-	5.4e-05	23.2	0.0	8.1e-05	22.6	0.0	1.3	1	0	0	1	1	1	1	Fcf1
SHS2_Rpb7-N	PF03876.12	gi|568163527|ref|YP_008946883.1|	-	1.6e-16	60.1	0.1	3e-16	59.2	0.0	1.5	1	0	0	1	1	1	1	SHS2	domain	found	in	N	terminus	of	Rpb7p/Rpc25p/MJ0397
S1	PF00575.18	gi|568163527|ref|YP_008946883.1|	-	2.5e-16	59.5	0.3	5.7e-16	58.3	0.2	1.6	1	0	0	1	1	1	1	S1	RNA	binding	domain
RNA_pol_Rbc25	PF08292.7	gi|568163527|ref|YP_008946883.1|	-	0.02	15.0	0.0	0.043	14.0	0.0	1.6	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	Rpc25
Spt4	PF06093.8	gi|568163528|ref|YP_008946884.1|	-	4.3e-13	48.9	0.1	5.2e-13	48.6	0.1	1.1	1	0	0	1	1	1	1	Spt4/RpoE2	zinc	finger
DZR	PF12773.2	gi|568163528|ref|YP_008946884.1|	-	0.0019	17.9	1.0	0.0024	17.6	0.7	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
UPF0547	PF10571.4	gi|568163528|ref|YP_008946884.1|	-	0.012	15.2	5.9	0.021	14.4	4.1	1.4	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0547
zf-C4H2	PF10146.4	gi|568163528|ref|YP_008946884.1|	-	0.018	15.0	0.9	0.021	14.8	0.6	1.1	1	0	0	1	1	1	0	Zinc	finger-containing	protein
YwqJ-deaminase	PF14431.1	gi|568163528|ref|YP_008946884.1|	-	0.037	13.8	0.2	0.056	13.2	0.1	1.3	1	0	0	1	1	1	0	YwqJ-like	deaminase
DUF35_N	PF12172.3	gi|568163528|ref|YP_008946884.1|	-	0.068	13.0	1.2	0.1	12.5	0.8	1.2	1	0	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-ribbon_3	PF13248.1	gi|568163528|ref|YP_008946884.1|	-	0.097	11.9	2.0	0.14	11.4	1.4	1.3	1	0	0	1	1	1	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|568163528|ref|YP_008946884.1|	-	0.15	11.6	1.8	0.25	10.8	1.2	1.3	1	0	0	1	1	1	0	zinc-ribbon	domain
zf-Sec23_Sec24	PF04810.10	gi|568163528|ref|YP_008946884.1|	-	2	8.0	5.0	52	3.5	3.4	2.2	1	1	0	1	1	1	0	Sec23/Sec24	zinc	finger
DUF359	PF04019.7	gi|568163529|ref|YP_008946885.1|	-	2.1e-39	133.6	0.1	2.7e-39	133.2	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF359)
PhosphMutase	PF10143.4	gi|568163530|ref|YP_008946886.1|	-	2.5e-61	206.2	0.0	9.3e-61	204.4	0.0	1.8	2	0	0	2	2	2	1	2,3-bisphosphoglycerate-independent	phosphoglycerate	mutase
Metalloenzyme	PF01676.13	gi|568163530|ref|YP_008946886.1|	-	1.8e-45	155.3	0.2	2.2e-45	155.0	0.1	1.1	1	0	0	1	1	1	1	Metalloenzyme	superfamily
Phosphodiest	PF01663.17	gi|568163530|ref|YP_008946886.1|	-	0.001	18.5	0.1	0.0019	17.5	0.1	1.4	1	0	0	1	1	1	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
Topoisom_bac	PF01131.15	gi|568163531|ref|YP_008946887.1|	-	5.1e-85	285.7	0.2	1.4e-84	284.2	0.1	1.8	1	1	0	1	1	1	1	DNA	topoisomerase
Toprim	PF01751.17	gi|568163531|ref|YP_008946887.1|	-	1.9e-24	85.5	1.0	1.3e-23	82.8	0.0	2.8	2	1	0	2	2	2	1	Toprim	domain
DEAD	PF00270.24	gi|568163531|ref|YP_008946887.1|	-	7.1e-14	51.6	0.1	4.4e-13	49.0	0.0	2.4	2	1	0	2	2	2	1	DEAD/DEAH	box	helicase
ResIII	PF04851.10	gi|568163531|ref|YP_008946887.1|	-	0.00041	20.2	0.1	0.002	17.9	0.0	2.2	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
Sgf11	PF08209.6	gi|568163531|ref|YP_008946887.1|	-	0.0054	16.0	0.1	0.013	14.7	0.1	1.7	1	0	0	1	1	1	1	Sgf11	(transcriptional	regulation	protein)
Helicase_C	PF00271.26	gi|568163531|ref|YP_008946887.1|	-	0.099	12.5	0.1	72	3.3	0.0	4.2	5	0	0	5	5	5	0	Helicase	conserved	C-terminal	domain
AAA_22	PF13401.1	gi|568163531|ref|YP_008946887.1|	-	0.12	12.4	0.6	6.5	6.9	0.1	3.6	3	1	0	3	3	3	0	AAA	domain
AAA_25	PF13481.1	gi|568163531|ref|YP_008946887.1|	-	0.22	10.9	0.1	0.47	9.8	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_19	PF13245.1	gi|568163531|ref|YP_008946887.1|	-	0.25	11.0	0.0	0.65	9.7	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
CN_hydrolase	PF00795.17	gi|568163532|ref|YP_008946888.1|	-	2.8e-10	39.8	0.0	4.5e-10	39.1	0.0	1.3	1	0	0	1	1	1	1	Carbon-nitrogen	hydrolase
TMP-TENI	PF02581.12	gi|568163532|ref|YP_008946888.1|	-	0.061	12.4	0.2	0.18	10.9	0.0	1.7	2	0	0	2	2	2	0	Thiamine	monophosphate	synthase/TENI
AP_endonuc_2	PF01261.19	gi|568163532|ref|YP_008946888.1|	-	0.095	11.9	0.0	0.15	11.3	0.0	1.2	1	0	0	1	1	1	0	Xylose	isomerase-like	TIM	barrel
Ribosomal_S25	PF03297.10	gi|568163533|ref|YP_008946889.1|	-	2.8e-11	43.3	9.9	3.4e-11	43.0	6.8	1.0	1	0	0	1	1	1	1	S25	ribosomal	protein
HTH_Crp_2	PF13545.1	gi|568163533|ref|YP_008946889.1|	-	0.00044	19.9	1.1	0.38	10.5	0.1	2.1	1	1	1	2	2	2	2	Crp-like	helix-turn-helix	domain
MarR	PF01047.17	gi|568163533|ref|YP_008946889.1|	-	0.00064	19.3	1.6	0.0026	17.4	0.2	2.4	2	1	1	3	3	3	1	MarR	family
EAP30	PF04157.11	gi|568163533|ref|YP_008946889.1|	-	0.0016	17.6	2.3	0.0039	16.3	1.6	1.6	1	1	0	1	1	1	1	EAP30/Vps36	family
HTH_24	PF13412.1	gi|568163533|ref|YP_008946889.1|	-	0.0024	17.2	1.2	0.55	9.6	0.2	2.5	2	1	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
IF2_N	PF04760.10	gi|568163533|ref|YP_008946889.1|	-	0.0054	16.3	3.0	0.32	10.6	0.1	2.4	1	1	1	2	2	2	1	Translation	initiation	factor	IF-2,	N-terminal	region
Rrf2	PF02082.15	gi|568163533|ref|YP_008946889.1|	-	0.0081	16.2	1.6	0.93	9.6	0.1	2.2	1	1	1	2	2	2	1	Transcriptional	regulator
TrmB	PF01978.14	gi|568163533|ref|YP_008946889.1|	-	0.0084	15.8	4.0	0.014	15.0	0.4	2.3	2	1	1	3	3	2	1	Sugar-specific	transcriptional	regulator	TrmB
Fe_dep_repress	PF01325.14	gi|568163533|ref|YP_008946889.1|	-	0.018	14.9	3.3	0.024	14.5	0.3	2.4	2	1	1	3	3	3	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Glycoamylase	PF10091.4	gi|568163533|ref|YP_008946889.1|	-	0.025	13.6	0.0	0.028	13.4	0.0	1.1	1	0	0	1	1	1	0	Putative	glucoamylase
HTH_11	PF08279.7	gi|568163533|ref|YP_008946889.1|	-	0.028	14.0	0.7	0.028	14.0	0.5	1.9	3	0	0	3	3	2	0	HTH	domain
MarR_2	PF12802.2	gi|568163533|ref|YP_008946889.1|	-	0.034	13.8	0.1	0.18	11.4	0.1	2.1	2	1	1	3	3	3	0	MarR	family
UPF0228	PF05727.6	gi|568163533|ref|YP_008946889.1|	-	0.051	13.3	1.4	0.065	12.9	0.7	1.4	1	1	0	1	1	1	0	Uncharacterised	protein	family	(UPF0228)
YWFCY	PF14293.1	gi|568163533|ref|YP_008946889.1|	-	0.052	13.3	0.0	0.082	12.7	0.0	1.3	1	0	0	1	1	1	0	YWFCY	protein
DUF1104	PF06518.6	gi|568163533|ref|YP_008946889.1|	-	0.06	13.4	7.5	0.11	12.6	5.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1104)
tRNA-Thr_ED	PF08915.6	gi|568163533|ref|YP_008946889.1|	-	0.25	11.3	4.0	0.57	10.1	2.8	1.7	1	1	0	1	1	1	0	Archaea-specific	editing	domain	of	threonyl-tRNA	synthetase
DDRGK	PF09756.4	gi|568163533|ref|YP_008946889.1|	-	0.54	9.6	11.3	1.4	8.2	7.9	1.5	1	1	0	1	1	1	0	DDRGK	domain
DUF4415	PF14384.1	gi|568163533|ref|YP_008946889.1|	-	0.64	10.2	3.3	28	4.9	2.3	2.2	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4415)
DUF2250	PF10007.4	gi|568163533|ref|YP_008946889.1|	-	0.88	9.5	5.0	0.42	10.5	0.6	2.2	1	1	2	3	3	3	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Tombus_movement	PF05318.7	gi|568163533|ref|YP_008946889.1|	-	8.8	7.0	7.7	60	4.3	5.4	2.1	1	1	0	1	1	1	0	Tombusvirus	movement	protein
TrmB	PF01978.14	gi|568163534|ref|YP_008946890.1|	-	4.3e-20	71.1	0.2	1.5e-19	69.4	0.0	1.9	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|568163534|ref|YP_008946890.1|	-	1.2e-06	27.8	0.3	3.4e-06	26.3	0.0	2.0	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_27	PF13463.1	gi|568163534|ref|YP_008946890.1|	-	4.5e-06	26.8	0.0	0.0017	18.6	0.0	2.3	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
Penicillinase_R	PF03965.11	gi|568163534|ref|YP_008946890.1|	-	0.00035	20.6	0.2	0.0007	19.6	0.1	1.5	1	0	0	1	1	1	1	Penicillinase	repressor
MarR	PF01047.17	gi|568163534|ref|YP_008946890.1|	-	0.0004	20.0	0.1	0.0011	18.5	0.0	1.8	2	0	0	2	2	2	1	MarR	family
PadR	PF03551.9	gi|568163534|ref|YP_008946890.1|	-	0.0067	16.1	0.0	0.017	14.8	0.0	1.6	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_34	PF13601.1	gi|568163534|ref|YP_008946890.1|	-	0.0096	15.9	0.0	0.023	14.7	0.0	1.6	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|568163534|ref|YP_008946890.1|	-	0.012	15.2	0.0	0.02	14.5	0.0	1.4	1	0	0	1	1	1	0	MarR	family
HTH_29	PF13551.1	gi|568163534|ref|YP_008946890.1|	-	0.021	14.9	0.0	0.034	14.2	0.0	1.3	1	0	0	1	1	1	0	Winged	helix-turn	helix
TFIIE_alpha	PF02002.12	gi|568163534|ref|YP_008946890.1|	-	0.029	13.8	0.7	0.086	12.3	0.1	2.0	2	1	0	2	2	2	0	TFIIE	alpha	subunit
HTH_28	PF13518.1	gi|568163534|ref|YP_008946890.1|	-	0.034	14.1	0.0	0.11	12.5	0.0	1.9	2	0	0	2	2	2	0	Helix-turn-helix	domain
DUF2250	PF10007.4	gi|568163534|ref|YP_008946890.1|	-	0.051	13.4	0.2	0.61	10.0	0.0	2.2	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Rrf2	PF02082.15	gi|568163534|ref|YP_008946890.1|	-	0.063	13.4	0.0	0.16	12.0	0.0	1.7	1	0	0	1	1	1	0	Transcriptional	regulator
DUF387	PF04079.11	gi|568163534|ref|YP_008946890.1|	-	0.07	12.5	0.0	0.19	11.0	0.0	1.7	2	0	0	2	2	2	0	Putative	transcriptional	regulators	(Ypuh-like)
RHH_1	PF01402.16	gi|568163535|ref|YP_008946891.1|	-	2.6e-08	33.4	0.0	2.9e-08	33.2	0.0	1.1	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
RHH_2	PF03693.9	gi|568163535|ref|YP_008946891.1|	-	1.5e-06	28.3	0.0	1.6e-06	28.2	0.0	1.1	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0156)
DUF2191	PF09957.4	gi|568163535|ref|YP_008946891.1|	-	0.0067	16.2	0.0	0.012	15.3	0.0	1.4	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2191)
GCD14	PF08704.5	gi|568163536|ref|YP_008946892.1|	-	3e-30	105.5	0.0	3.9e-30	105.1	0.0	1.1	1	0	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
Methyltransf_31	PF13847.1	gi|568163536|ref|YP_008946892.1|	-	8.3e-13	48.1	0.0	1.1e-12	47.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|568163536|ref|YP_008946892.1|	-	7.8e-11	42.5	0.0	1.2e-10	41.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|568163536|ref|YP_008946892.1|	-	8.1e-09	35.3	0.0	1.1e-08	34.8	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_26	PF13659.1	gi|568163536|ref|YP_008946892.1|	-	1.4e-06	28.2	0.0	3.6e-06	27.0	0.0	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|568163536|ref|YP_008946892.1|	-	9e-06	25.1	0.0	3.1e-05	23.4	0.0	1.9	1	1	0	1	1	1	1	Methyltransferase	small	domain
PrmA	PF06325.8	gi|568163536|ref|YP_008946892.1|	-	5.2e-05	22.4	0.0	7e-05	22.0	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Ubie_methyltran	PF01209.13	gi|568163536|ref|YP_008946892.1|	-	6.4e-05	22.1	0.0	0.00012	21.3	0.0	1.4	1	1	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
UPF0020	PF01170.13	gi|568163536|ref|YP_008946892.1|	-	7.4e-05	22.3	0.0	0.00012	21.7	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_24	PF13578.1	gi|568163536|ref|YP_008946892.1|	-	0.00017	22.3	0.0	0.0003	21.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_3	PF01596.12	gi|568163536|ref|YP_008946892.1|	-	0.00018	20.6	0.0	0.00028	20.0	0.0	1.2	1	0	0	1	1	1	1	O-methyltransferase
Methyltransf_23	PF13489.1	gi|568163536|ref|YP_008946892.1|	-	0.00018	21.2	0.0	0.00083	19.1	0.0	1.8	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_32	PF13679.1	gi|568163536|ref|YP_008946892.1|	-	0.0002	21.0	0.0	0.00028	20.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|568163536|ref|YP_008946892.1|	-	0.00058	20.2	0.0	0.0015	18.9	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|568163536|ref|YP_008946892.1|	-	0.0025	16.9	0.0	0.0034	16.4	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_25	PF13649.1	gi|568163536|ref|YP_008946892.1|	-	0.0098	16.2	0.0	0.02	15.2	0.0	1.6	2	0	0	2	2	1	1	Methyltransferase	domain
Methyltransf_16	PF10294.4	gi|568163536|ref|YP_008946892.1|	-	0.11	11.9	0.0	0.17	11.2	0.0	1.3	1	0	0	1	1	1	0	Putative	methyltransferase
DUF946	PF06101.6	gi|568163536|ref|YP_008946892.1|	-	0.13	10.1	0.0	0.19	9.6	0.0	1.1	1	0	0	1	1	1	0	Plant	protein	of	unknown	function	(DUF946)
ATP-synt_F6	PF05511.6	gi|568163537|ref|YP_008946893.1|	-	0.0042	16.9	2.3	0.011	15.5	0.3	2.1	1	1	0	2	2	2	1	Mitochondrial	ATP	synthase	coupling	factor	6
OmpH	PF03938.9	gi|568163537|ref|YP_008946893.1|	-	0.052	13.4	6.2	0.063	13.2	4.3	1.0	1	0	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
DUF496	PF04363.7	gi|568163537|ref|YP_008946893.1|	-	0.083	12.7	2.8	0.11	12.3	1.9	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF496)
PMC2NT	PF08066.7	gi|568163537|ref|YP_008946893.1|	-	0.086	13.1	0.5	0.22	11.8	0.1	1.7	1	1	1	2	2	2	0	PMC2NT	(NUC016)	domain
GlnE	PF03710.10	gi|568163537|ref|YP_008946893.1|	-	0.099	11.8	0.7	0.11	11.7	0.5	1.1	1	0	0	1	1	1	0	Glutamate-ammonia	ligase	adenylyltransferase
Peptidase_U40	PF10464.4	gi|568163537|ref|YP_008946893.1|	-	0.12	11.7	0.0	0.16	11.3	0.0	1.1	1	0	0	1	1	1	0	Peptidase	U40
DUF2115	PF09888.4	gi|568163537|ref|YP_008946893.1|	-	0.21	11.7	2.5	0.25	11.4	1.8	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2115)
Mitofilin	PF09731.4	gi|568163537|ref|YP_008946893.1|	-	0.32	9.6	9.7	0.38	9.3	6.8	1.0	1	0	0	1	1	1	0	Mitochondrial	inner	membrane	protein
Ribosomal_S8	PF00410.14	gi|568163537|ref|YP_008946893.1|	-	0.51	10.1	3.0	0.66	9.8	1.6	1.5	1	1	0	1	1	1	0	Ribosomal	protein	S8
DUF826	PF05696.6	gi|568163537|ref|YP_008946893.1|	-	0.58	10.3	6.0	0.41	10.8	0.6	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF826)
LUC7	PF03194.10	gi|568163537|ref|YP_008946893.1|	-	0.9	9.0	4.9	1.2	8.6	3.4	1.2	1	0	0	1	1	1	0	LUC7	N_terminus
ETC_C1_NDUFA5	PF04716.9	gi|568163537|ref|YP_008946893.1|	-	2.2	7.8	6.9	14	5.3	0.1	2.8	2	1	1	3	3	3	0	ETC	complex	I	subunit	conserved	region
vATP-synt_AC39	PF01992.11	gi|568164793|ref|YP_008946894.1|	-	5.3e-07	29.0	6.8	1.6e-06	27.5	4.7	1.8	1	1	0	1	1	1	1	ATP	synthase	(C/AC39)	subunit
Rep_N	PF08724.5	gi|568164793|ref|YP_008946894.1|	-	0.093	12.2	0.0	0.15	11.5	0.0	1.3	1	0	0	1	1	1	0	Rep	protein	catalytic	domain	like
Ten1_2	PF15490.1	gi|568164793|ref|YP_008946894.1|	-	0.12	11.9	0.1	15	5.2	0.0	2.5	1	1	1	2	2	2	0	Telomere-capping,	CST	complex	subunit
Aldo_ket_red	PF00248.16	gi|568163539|ref|YP_008946896.1|	-	1.2e-44	152.2	0.0	1.5e-44	151.9	0.0	1.1	1	0	0	1	1	1	1	Aldo/keto	reductase	family
Ham1p_like	PF01725.11	gi|568163540|ref|YP_008946897.1|	-	6.6e-54	182.1	0.0	7.5e-54	181.9	0.0	1.0	1	0	0	1	1	1	1	Ham1	family
CAMSAP_CKK	PF08683.6	gi|568163540|ref|YP_008946897.1|	-	0.08	12.6	0.1	0.15	11.7	0.1	1.5	1	0	0	1	1	1	0	Microtubule-binding	calmodulin-regulated	spectrin-associated
RIO1	PF01163.17	gi|568163541|ref|YP_008946898.1|	-	1.9e-11	43.6	0.1	2.9e-11	43.0	0.0	1.3	1	0	0	1	1	1	1	RIO1	family
Pkinase	PF00069.20	gi|568163541|ref|YP_008946898.1|	-	1.2e-10	41.0	0.5	1.6e-10	40.5	0.3	1.2	1	0	0	1	1	1	1	Protein	kinase	domain
APH	PF01636.18	gi|568163541|ref|YP_008946898.1|	-	8.4e-09	35.5	0.0	3.4e-05	23.7	0.0	2.1	1	1	1	2	2	2	2	Phosphotransferase	enzyme	family
Kdo	PF06293.9	gi|568163541|ref|YP_008946898.1|	-	7.3e-08	31.7	0.0	1e-07	31.2	0.0	1.3	1	0	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
Pkinase_Tyr	PF07714.12	gi|568163541|ref|YP_008946898.1|	-	2.7e-06	26.6	0.2	4.8e-06	25.8	0.1	1.5	1	1	0	1	1	1	1	Protein	tyrosine	kinase
WaaY	PF06176.6	gi|568163541|ref|YP_008946898.1|	-	8.8e-06	25.0	2.0	1.2e-05	24.6	1.4	1.4	1	1	0	1	1	1	1	Lipopolysaccharide	core	biosynthesis	protein	(WaaY)
Choline_kinase	PF01633.15	gi|568163541|ref|YP_008946898.1|	-	0.011	15.2	0.1	0.028	14.0	0.1	1.7	1	1	0	1	1	1	0	Choline/ethanolamine	kinase
EcKinase	PF02958.15	gi|568163541|ref|YP_008946898.1|	-	0.012	14.7	0.1	0.022	13.9	0.0	1.5	2	0	0	2	2	2	0	Ecdysteroid	kinase
Peptidase_M22	PF00814.20	gi|568163542|ref|YP_008946899.1|	-	1.1e-76	257.8	0.1	1.3e-76	257.5	0.1	1.0	1	0	0	1	1	1	1	Glycoprotease	family
Ribosomal_S27	PF01599.14	gi|568163543|ref|YP_008946900.1|	-	1.6e-10	40.6	1.4	2.3e-10	40.1	1.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S27a
Zn_Tnp_IS1595	PF12760.2	gi|568163543|ref|YP_008946900.1|	-	0.00018	21.2	1.9	0.00026	20.7	1.3	1.3	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
RNA_POL_M_15KD	PF02150.11	gi|568163543|ref|YP_008946900.1|	-	0.00073	19.1	0.2	0.0015	18.1	0.1	1.5	1	0	0	1	1	1	1	RNA	polymerases	M/15	Kd	subunit
OrfB_Zn_ribbon	PF07282.6	gi|568163543|ref|YP_008946900.1|	-	0.0017	17.9	1.6	0.002	17.7	0.9	1.3	1	1	0	1	1	1	1	Putative	transposase	DNA-binding	domain
zf-ribbon_3	PF13248.1	gi|568163543|ref|YP_008946900.1|	-	0.004	16.3	0.8	0.29	10.4	0.0	2.2	2	0	0	2	2	2	1	zinc-ribbon	domain
GFA	PF04828.9	gi|568163543|ref|YP_008946900.1|	-	0.0079	16.1	1.5	0.7	9.8	0.1	2.1	1	1	1	2	2	2	1	Glutathione-dependent	formaldehyde-activating	enzyme
zf-tcix	PF14952.1	gi|568163543|ref|YP_008946900.1|	-	0.015	14.6	2.6	0.066	12.5	0.0	2.3	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
zinc_ribbon_2	PF13240.1	gi|568163543|ref|YP_008946900.1|	-	0.019	14.4	1.2	0.96	9.0	0.0	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
DZR	PF12773.2	gi|568163543|ref|YP_008946900.1|	-	0.022	14.5	1.1	0.039	13.7	0.8	1.5	1	1	0	1	1	1	0	Double	zinc	ribbon
DUF2082	PF09855.4	gi|568163543|ref|YP_008946900.1|	-	0.035	13.9	2.9	0.29	10.9	0.2	2.4	1	1	1	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
FAM72	PF14976.1	gi|568163543|ref|YP_008946900.1|	-	0.039	13.7	0.6	0.063	13.1	0.4	1.4	1	1	0	1	1	1	0	FAM72	protein
Nudix_N_2	PF14803.1	gi|568163543|ref|YP_008946900.1|	-	0.052	13.2	1.8	0.17	11.5	1.2	1.9	1	1	0	1	1	1	0	Nudix	N-terminal
Zn-ribbon_8	PF09723.5	gi|568163543|ref|YP_008946900.1|	-	0.072	13.0	0.7	1.2	9.0	0.0	2.2	2	0	0	2	2	2	0	Zinc	ribbon	domain
Zn_Tnp_IS91	PF14319.1	gi|568163543|ref|YP_008946900.1|	-	0.082	12.4	0.5	0.11	12.0	0.4	1.3	1	0	0	1	1	1	0	Transposase	zinc-binding	domain
zf-ISL3	PF14690.1	gi|568163543|ref|YP_008946900.1|	-	0.09	12.8	3.6	1.2	9.2	0.6	2.2	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
DUF2387	PF09526.5	gi|568163543|ref|YP_008946900.1|	-	0.11	12.3	1.2	0.16	11.9	0.2	1.7	2	0	0	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
TFIIS_C	PF01096.13	gi|568163543|ref|YP_008946900.1|	-	0.21	11.2	1.8	4.6	6.9	0.2	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
Rubredoxin	PF00301.15	gi|568163543|ref|YP_008946900.1|	-	0.29	11.0	2.0	9	6.2	0.1	2.3	2	0	0	2	2	2	0	Rubredoxin
A2L_zn_ribbon	PF08792.5	gi|568163543|ref|YP_008946900.1|	-	0.29	10.6	1.4	5.4	6.6	0.1	2.3	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
Ribosomal_L37e	PF01907.14	gi|568163543|ref|YP_008946900.1|	-	0.33	10.7	3.0	0.61	9.9	2.1	1.5	1	1	0	1	1	1	0	Ribosomal	protein	L37e
UPF0547	PF10571.4	gi|568163543|ref|YP_008946900.1|	-	1.5	8.5	6.8	0.58	9.8	0.5	2.1	1	1	1	2	2	2	0	Uncharacterised	protein	family	UPF0547
YhfH	PF14149.1	gi|568163543|ref|YP_008946900.1|	-	1.7	8.5	7.8	0.4	10.5	0.9	2.2	1	1	1	2	2	2	0	YhfH-like	protein
zf-NADH-PPase	PF09297.6	gi|568163543|ref|YP_008946900.1|	-	1.7	8.1	5.6	3.4	7.2	0.1	2.2	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
Ogr_Delta	PF04606.7	gi|568163543|ref|YP_008946900.1|	-	2.6	7.7	5.9	9.6	5.9	0.6	2.7	3	0	0	3	3	3	0	Ogr/Delta-like	zinc	finger
Auto_anti-p27	PF06677.7	gi|568163543|ref|YP_008946900.1|	-	3.4	7.5	6.0	30	4.4	4.5	2.0	1	1	1	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
TF_Zn_Ribbon	PF08271.7	gi|568163543|ref|YP_008946900.1|	-	6.2	6.2	6.2	4.2	6.7	0.2	2.6	3	0	0	3	3	3	0	TFIIB	zinc-binding
zf-IS66	PF13005.2	gi|568163543|ref|YP_008946900.1|	-	8.6	6.4	6.4	4.7	7.2	0.2	2.3	1	1	1	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
Ribosomal_S24e	PF01282.14	gi|568163544|ref|YP_008946901.1|	-	1.1e-15	57.1	0.1	1.7e-15	56.5	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S24e
Thi4	PF01946.12	gi|568163545|ref|YP_008946902.1|	-	1.2e-87	292.7	4.3	1.4e-87	292.5	3.0	1.0	1	0	0	1	1	1	1	Thi4	family
DAO	PF01266.19	gi|568163545|ref|YP_008946902.1|	-	3.8e-15	55.6	4.5	1.9e-09	36.9	0.3	2.1	1	1	1	2	2	2	2	FAD	dependent	oxidoreductase
FAD_oxidored	PF12831.2	gi|568163545|ref|YP_008946902.1|	-	3.1e-10	39.7	3.2	3.9e-10	39.3	2.2	1.1	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|568163545|ref|YP_008946902.1|	-	3.3e-10	39.8	0.7	8.5e-10	38.5	0.4	1.7	2	0	0	2	2	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.19	gi|568163545|ref|YP_008946902.1|	-	3.4e-10	39.3	5.8	1.4e-07	30.6	0.7	2.6	3	0	0	3	3	3	2	FAD	binding	domain
Pyr_redox_2	PF07992.9	gi|568163545|ref|YP_008946902.1|	-	2.3e-08	34.1	1.2	3.5e-08	33.5	0.7	1.4	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|568163545|ref|YP_008946902.1|	-	1.5e-07	31.6	0.4	4e-07	30.3	0.3	1.7	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|568163545|ref|YP_008946902.1|	-	6.1e-07	28.8	0.0	9.5e-07	28.1	0.0	1.3	1	0	0	1	1	1	1	FAD	binding	domain
HI0933_like	PF03486.9	gi|568163545|ref|YP_008946902.1|	-	4.1e-06	25.5	0.2	5.5e-06	25.1	0.1	1.3	1	0	0	1	1	1	1	HI0933-like	protein
GIDA	PF01134.17	gi|568163545|ref|YP_008946902.1|	-	1.1e-05	24.5	0.7	1.9e-05	23.6	0.5	1.4	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
Lycopene_cycl	PF05834.7	gi|568163545|ref|YP_008946902.1|	-	0.00027	19.9	0.3	0.0008	18.4	0.2	1.8	1	1	0	1	1	1	1	Lycopene	cyclase	protein
Pyr_redox	PF00070.22	gi|568163545|ref|YP_008946902.1|	-	0.00055	20.2	0.6	0.0023	18.3	0.4	2.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Amino_oxidase	PF01593.19	gi|568163545|ref|YP_008946902.1|	-	0.0012	17.9	0.0	0.0084	15.2	0.0	2.0	2	0	0	2	2	2	1	Flavin	containing	amine	oxidoreductase
Shikimate_DH	PF01488.15	gi|568163545|ref|YP_008946902.1|	-	0.0037	17.3	0.0	0.011	15.8	0.0	1.7	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
ThiF	PF00899.16	gi|568163545|ref|YP_008946902.1|	-	0.023	14.5	0.2	0.067	13.0	0.0	1.9	2	0	0	2	2	2	0	ThiF	family
NAD_binding_9	PF13454.1	gi|568163545|ref|YP_008946902.1|	-	0.027	14.2	1.2	0.058	13.1	0.1	2.0	2	0	0	2	2	2	0	FAD-NAD(P)-binding
K_oxygenase	PF13434.1	gi|568163545|ref|YP_008946902.1|	-	0.08	11.8	0.0	0.13	11.1	0.0	1.2	1	0	0	1	1	1	0	L-lysine	6-monooxygenase	(NADPH-requiring)
Trp_halogenase	PF04820.9	gi|568163545|ref|YP_008946902.1|	-	0.092	11.3	4.9	0.15	10.6	0.5	2.4	2	1	1	3	3	3	0	Tryptophan	halogenase
GMC_oxred_N	PF00732.14	gi|568163545|ref|YP_008946902.1|	-	0.12	11.5	0.1	0.26	10.4	0.0	1.5	2	0	0	2	2	2	0	GMC	oxidoreductase
Flavoprotein	PF02441.14	gi|568163546|ref|YP_008946903.1|	-	1.5e-22	79.6	0.0	2.5e-22	78.9	0.0	1.3	1	0	0	1	1	1	1	Flavoprotein
Fer4_18	PF13746.1	gi|568163547|ref|YP_008946904.1|	-	0.44	11.0	4.2	7	7.1	2.9	2.2	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
tRNA_int_endo	PF01974.12	gi|568163548|ref|YP_008946905.1|	-	1e-25	89.3	0.0	1.7e-25	88.6	0.0	1.4	1	0	0	1	1	1	1	tRNA	intron	endonuclease,	catalytic	C-terminal	domain
tRNA_int_endo_N	PF02778.9	gi|568163548|ref|YP_008946905.1|	-	1e-20	73.0	0.1	4.2e-20	71.0	0.1	1.9	2	0	0	2	2	2	1	tRNA	intron	endonuclease,	N-terminal	domain
PhoU_div	PF01865.11	gi|568163549|ref|YP_008946906.1|	-	3.5e-09	36.1	8.2	3.7e-07	29.5	1.7	2.1	1	1	1	2	2	2	2	Protein	of	unknown	function	DUF47
PhoU	PF01895.14	gi|568163549|ref|YP_008946906.1|	-	1.7e-07	31.6	11.2	4.7e-06	26.9	2.4	2.7	2	1	1	3	3	3	2	PhoU	domain
Tropomyosin	PF00261.15	gi|568163549|ref|YP_008946906.1|	-	0.0026	16.9	1.7	0.012	14.7	0.4	2.0	1	1	0	2	2	2	1	Tropomyosin
HrpJ	PF07201.6	gi|568163549|ref|YP_008946906.1|	-	0.0071	16.3	0.2	0.02	14.8	0.1	1.8	1	0	0	1	1	1	1	HrpJ-like	domain
Spore_YpjB	PF09577.5	gi|568163549|ref|YP_008946906.1|	-	0.032	13.7	0.6	0.032	13.7	0.4	1.5	2	0	0	2	2	2	0	Sporulation	protein	YpjB	(SpoYpjB)
DUF1664	PF07889.7	gi|568163549|ref|YP_008946906.1|	-	0.048	13.4	0.8	0.24	11.1	0.0	2.4	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF1664)
DUF2333	PF10095.4	gi|568163549|ref|YP_008946906.1|	-	0.049	12.2	0.2	0.078	11.6	0.1	1.3	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2333)
T4_tail_cap	PF11091.3	gi|568163549|ref|YP_008946906.1|	-	0.067	11.8	2.6	0.14	10.8	0.2	1.9	1	1	0	2	2	2	0	Tail-tube	assembly	protein
DUF2408	PF10303.4	gi|568163549|ref|YP_008946906.1|	-	0.49	10.5	2.9	7	6.7	0.1	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2408)
Sec8_exocyst	PF04048.9	gi|568163549|ref|YP_008946906.1|	-	0.57	9.8	6.0	0.87	9.2	0.6	2.5	1	1	1	2	2	2	0	Sec8	exocyst	complex	component	specific	domain
Laminin_II	PF06009.7	gi|568163549|ref|YP_008946906.1|	-	0.61	9.8	7.4	1.7	8.3	0.2	2.9	2	1	1	3	3	3	0	Laminin	Domain	II
DUF1002	PF06207.6	gi|568163549|ref|YP_008946906.1|	-	1.1	8.4	7.1	0.7	9.1	0.9	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1002)
DUF4559	PF15112.1	gi|568163549|ref|YP_008946906.1|	-	1.6	7.7	5.2	2.2	7.3	0.7	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4559)
DUF948	PF06103.6	gi|568163550|ref|YP_008946907.1|	-	0.029	14.2	2.1	0.054	13.3	0.3	1.9	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
MMS19_N	PF14500.1	gi|568163550|ref|YP_008946907.1|	-	0.036	13.3	0.1	0.047	12.9	0.1	1.3	1	0	0	1	1	1	0	Dos2-interacting	transcription	regulator	of	RNA-Pol-II
ACCA	PF03255.9	gi|568163550|ref|YP_008946907.1|	-	0.36	10.3	2.4	1.4	8.4	0.6	2.0	2	0	0	2	2	2	0	Acetyl	co-enzyme	A	carboxylase	carboxyltransferase	alpha	subunit
DUF2730	PF10805.3	gi|568163550|ref|YP_008946907.1|	-	0.62	9.8	2.8	0.59	9.8	0.4	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2730)
XhlA	PF10779.4	gi|568163550|ref|YP_008946907.1|	-	1.9	8.4	6.6	6.4	6.7	0.9	2.3	1	1	1	2	2	2	0	Haemolysin	XhlA
Molydop_binding	PF01568.16	gi|568163551|ref|YP_008946908.1|	-	0.00077	19.2	0.3	0.17	11.7	0.0	2.2	1	1	1	2	2	2	2	Molydopterin	dinucleotide	binding	domain
Ig_J_chain	PF15097.1	gi|568163551|ref|YP_008946908.1|	-	0.15	11.6	1.3	0.17	11.5	0.9	1.1	1	0	0	1	1	1	0	Immunoglobulin	J	chain
tRNA-synt_2b	PF00587.20	gi|568163552|ref|YP_008946909.1|	-	1.3e-52	177.8	0.6	2.4e-52	176.9	0.0	1.7	2	0	0	2	2	2	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|568163552|ref|YP_008946909.1|	-	9.5e-18	63.9	0.1	2.3e-17	62.7	0.0	1.7	1	0	0	1	1	1	1	Anticodon	binding	domain
YokU	PF14122.1	gi|568163552|ref|YP_008946909.1|	-	0.069	12.8	2.6	0.36	10.5	0.0	2.7	2	0	0	2	2	2	0	YokU-like	protein
CaMKII_AD	PF08332.5	gi|568163552|ref|YP_008946909.1|	-	0.087	12.7	0.5	13	5.6	0.0	2.5	2	0	0	2	2	2	0	Calcium/calmodulin	dependent	protein	kinase	II	Association
Zn-ribbon_8	PF09723.5	gi|568163552|ref|YP_008946909.1|	-	0.13	12.2	0.3	3.9	7.5	0.0	2.4	2	0	0	2	2	2	0	Zinc	ribbon	domain
zinc_ribbon_4	PF13717.1	gi|568163552|ref|YP_008946909.1|	-	0.2	11.3	0.8	16	5.3	0.0	2.6	2	0	0	2	2	2	0	zinc-ribbon	domain
Arginase	PF00491.16	gi|568163553|ref|YP_008946910.1|	-	1.4e-69	234.5	0.0	1.6e-69	234.2	0.0	1.0	1	0	0	1	1	1	1	Arginase	family
DNA_RNApol_7kD	PF03604.8	gi|568163554|ref|YP_008946911.1|	-	1.3e-06	27.7	4.1	2.6e-06	26.8	2.8	1.5	1	1	0	1	1	1	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
zinc_ribbon_2	PF13240.1	gi|568163554|ref|YP_008946911.1|	-	0.0017	17.7	0.5	0.0035	16.7	0.4	1.5	1	1	0	1	1	1	1	zinc-ribbon	domain
DUF2072	PF09845.4	gi|568163554|ref|YP_008946911.1|	-	0.0074	16.2	0.3	0.0078	16.1	0.2	1.0	1	0	0	1	1	1	1	Zn-ribbon	containing	protein	(DUF2072)
zf-ribbon_3	PF13248.1	gi|568163554|ref|YP_008946911.1|	-	0.023	13.8	0.9	0.093	11.9	0.1	2.0	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-CHY	PF05495.7	gi|568163554|ref|YP_008946911.1|	-	0.042	14.0	0.1	0.042	14.0	0.0	1.1	1	0	0	1	1	1	0	CHY	zinc	finger
DZR	PF12773.2	gi|568163554|ref|YP_008946911.1|	-	0.043	13.6	0.2	0.12	12.2	0.2	1.6	1	1	0	1	1	1	0	Double	zinc	ribbon
Zn_Tnp_IS1595	PF12760.2	gi|568163554|ref|YP_008946911.1|	-	0.044	13.5	4.4	0.1	12.4	0.1	2.1	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
Zn_ribbon_recom	PF13408.1	gi|568163554|ref|YP_008946911.1|	-	0.067	13.4	1.5	0.91	9.8	0.1	2.1	2	0	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
Mu-like_Com	PF10122.4	gi|568163554|ref|YP_008946911.1|	-	0.067	12.2	1.3	0.11	11.6	0.9	1.4	1	1	0	1	1	1	0	Mu-like	prophage	protein	Com
zf-ISL3	PF14690.1	gi|568163554|ref|YP_008946911.1|	-	0.068	13.2	0.4	0.068	13.2	0.3	2.0	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-C2H2	PF00096.21	gi|568163554|ref|YP_008946911.1|	-	0.07	13.5	1.6	7	7.2	0.1	2.2	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
DUF164	PF02591.10	gi|568163554|ref|YP_008946911.1|	-	0.09	12.6	0.4	0.13	12.0	0.3	1.3	1	1	0	1	1	1	0	Putative	zinc	ribbon	domain
Zn-ribbon_8	PF09723.5	gi|568163554|ref|YP_008946911.1|	-	0.1	12.6	1.6	0.2	11.6	1.1	1.5	1	1	0	1	1	1	0	Zinc	ribbon	domain
HypA	PF01155.14	gi|568163554|ref|YP_008946911.1|	-	0.11	12.2	0.1	0.11	12.1	0.1	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zinc_ribbon_5	PF13719.1	gi|568163554|ref|YP_008946911.1|	-	0.12	11.9	4.1	0.66	9.6	0.1	2.5	1	1	1	2	2	2	0	zinc-ribbon	domain
zf-CHCC	PF10276.4	gi|568163554|ref|YP_008946911.1|	-	0.15	11.8	2.2	0.16	11.8	1.2	1.5	1	1	0	1	1	1	0	Zinc-finger	domain
zf-Di19	PF05605.7	gi|568163554|ref|YP_008946911.1|	-	0.19	11.8	0.7	4.1	7.6	0.1	2.0	2	0	0	2	2	2	0	Drought	induced	19	protein	(Di19),	zinc-binding
zf-RING_5	PF14634.1	gi|568163554|ref|YP_008946911.1|	-	0.21	11.3	1.7	1.7	8.4	0.0	2.0	1	1	1	2	2	2	0	zinc-RING	finger	domain
zinc_ribbon_4	PF13717.1	gi|568163554|ref|YP_008946911.1|	-	0.26	11.0	4.1	1.2	8.8	0.1	2.5	1	1	1	2	2	2	0	zinc-ribbon	domain
zf-H2C2_2	PF13465.1	gi|568163554|ref|YP_008946911.1|	-	0.33	11.3	2.2	1.5	9.2	0.1	2.1	2	0	0	2	2	2	0	Zinc-finger	double	domain
OrfB_Zn_ribbon	PF07282.6	gi|568163554|ref|YP_008946911.1|	-	0.38	10.4	2.2	9.8	5.9	0.0	2.0	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
zf-BED	PF02892.10	gi|568163554|ref|YP_008946911.1|	-	0.7	9.7	4.2	1	9.2	0.9	2.0	1	1	1	2	2	2	0	BED	zinc	finger
Rubredoxin	PF00301.15	gi|568163554|ref|YP_008946911.1|	-	0.88	9.4	6.8	13	5.7	0.9	2.1	1	1	1	2	2	2	0	Rubredoxin
zf-HIT	PF04438.11	gi|568163554|ref|YP_008946911.1|	-	0.99	9.1	5.8	3.1	7.5	0.4	2.1	2	0	0	2	2	2	0	HIT	zinc	finger
UPF0547	PF10571.4	gi|568163554|ref|YP_008946911.1|	-	2.6	7.8	5.3	0.68	9.6	0.7	1.9	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
SUI1	PF01253.17	gi|568163555|ref|YP_008946912.1|	-	2.3e-26	91.3	2.1	2.7e-26	91.2	1.5	1.1	1	0	0	1	1	1	1	Translation	initiation	factor	SUI1
Img2	PF05046.9	gi|568163555|ref|YP_008946912.1|	-	0.024	14.8	0.9	0.039	14.1	0.6	1.5	1	1	0	1	1	1	0	Mitochondrial	large	subunit	ribosomal	protein	(Img2)
TFIIB	PF00382.14	gi|568163556|ref|YP_008946913.1|	-	5.7e-38	128.5	5.7	5.4e-20	70.9	0.6	2.2	2	0	0	2	2	2	2	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.7	gi|568163556|ref|YP_008946913.1|	-	2.5e-15	55.5	0.5	2.5e-15	55.5	0.3	1.7	2	0	0	2	2	2	1	TFIIB	zinc-binding
HTH_AsnC-type	PF13404.1	gi|568163556|ref|YP_008946913.1|	-	9.4e-06	25.0	0.1	2.7e-05	23.6	0.1	1.8	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
Sigma70_r4	PF04545.11	gi|568163556|ref|YP_008946913.1|	-	3.2e-05	23.1	2.1	0.00076	18.7	0.1	3.3	3	1	0	3	3	3	1	Sigma-70,	region	4
HTH_24	PF13412.1	gi|568163556|ref|YP_008946913.1|	-	0.0001	21.6	0.2	0.00053	19.3	0.1	2.3	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
Cyclin_C	PF02984.14	gi|568163556|ref|YP_008946913.1|	-	0.00012	22.0	0.3	0.075	12.9	0.0	2.3	1	1	1	2	2	2	2	Cyclin,	C-terminal	domain
HARE-HTH	PF05066.8	gi|568163556|ref|YP_008946913.1|	-	0.00048	20.4	0.1	1.1	9.6	0.0	2.5	2	0	0	2	2	2	2	HB1,	ASXL,	restriction	endonuclease	HTH	domain
HTH_11	PF08279.7	gi|568163556|ref|YP_008946913.1|	-	0.0022	17.6	0.2	0.0047	16.5	0.1	1.6	1	0	0	1	1	1	1	HTH	domain
Sigma70_r4_2	PF08281.7	gi|568163556|ref|YP_008946913.1|	-	0.0022	17.4	0.1	0.01	15.2	0.0	2.2	2	0	0	2	2	2	1	Sigma-70,	region	4
Cyclin_N	PF00134.18	gi|568163556|ref|YP_008946913.1|	-	0.0058	16.1	0.2	1	8.9	0.1	2.2	2	0	0	2	2	2	1	Cyclin,	N-terminal	domain
HTH_Tnp_ISL3	PF13542.1	gi|568163556|ref|YP_008946913.1|	-	0.0068	15.5	0.9	0.28	10.4	0.0	3.0	3	0	0	3	3	3	1	Helix-turn-helix	domain	of	transposase	family	ISL3
HHH_5	PF14520.1	gi|568163556|ref|YP_008946913.1|	-	0.0078	16.3	0.6	0.27	11.4	0.1	2.9	3	0	0	3	3	3	1	Helix-hairpin-helix	domain
HTH_23	PF13384.1	gi|568163556|ref|YP_008946913.1|	-	0.015	14.9	0.1	0.015	14.9	0.1	3.2	4	0	0	4	4	4	0	Homeodomain-like	domain
DUF3562	PF12085.3	gi|568163556|ref|YP_008946913.1|	-	0.018	14.8	0.6	0.69	9.7	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3562)
HHH	PF00633.18	gi|568163556|ref|YP_008946913.1|	-	0.052	13.2	0.1	2.5	7.9	0.0	2.7	2	0	0	2	2	2	0	Helix-hairpin-helix	motif
HTH_37	PF13744.1	gi|568163556|ref|YP_008946913.1|	-	0.12	12.1	1.7	0.36	10.6	0.1	2.5	3	0	0	3	3	3	0	Helix-turn-helix	domain
BatA	PF07584.6	gi|568163556|ref|YP_008946913.1|	-	0.13	12.4	0.0	0.28	11.4	0.0	1.5	1	0	0	1	1	1	0	Aerotolerance	regulator	N-terminal
HTH_Crp_2	PF13545.1	gi|568163556|ref|YP_008946913.1|	-	0.15	11.8	2.0	1.5	8.6	0.0	2.9	3	0	0	3	3	2	0	Crp-like	helix-turn-helix	domain
HTH_38	PF13936.1	gi|568163556|ref|YP_008946913.1|	-	1.2	8.7	3.9	2.6	7.6	0.0	3.6	3	0	0	3	3	3	0	Helix-turn-helix	domain
DUF131	PF01998.12	gi|568163557|ref|YP_008946914.1|	-	8.6e-15	53.8	5.7	8.6e-15	53.8	4.0	1.9	1	1	1	2	2	2	1	Protein	of	unknown	function	DUF131
DUF4203	PF13886.1	gi|568163557|ref|YP_008946914.1|	-	0.12	11.8	7.3	0.13	11.6	5.0	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4203)
Cytochrom_B_N_2	PF13631.1	gi|568163557|ref|YP_008946914.1|	-	0.13	12.0	4.2	0.16	11.7	2.9	1.2	1	0	0	1	1	1	0	Cytochrome	b(N-terminal)/b6/petB
Virul_fac_BrkB	PF03631.10	gi|568163557|ref|YP_008946914.1|	-	0.17	11.1	4.7	0.22	10.8	3.2	1.1	1	0	0	1	1	1	0	Virulence	factor	BrkB
DUF2512	PF10710.4	gi|568163557|ref|YP_008946914.1|	-	1.1	8.6	3.3	2.6	7.4	0.3	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2512)
DUF4064	PF13273.1	gi|568163557|ref|YP_008946914.1|	-	1.4	9.0	7.8	2.7	8.1	5.4	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4064)
DUF485	PF04341.7	gi|568163557|ref|YP_008946914.1|	-	1.4	8.7	5.0	3.5	7.3	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF485
DUF4149	PF13664.1	gi|568163557|ref|YP_008946914.1|	-	1.8	8.6	5.9	4.6	7.3	4.1	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4149)
DUF202	PF02656.10	gi|568163557|ref|YP_008946914.1|	-	2.7	8.2	6.2	8.4	6.6	4.3	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF202)
DUF2207	PF09972.4	gi|568163557|ref|YP_008946914.1|	-	3	6.3	5.4	3.6	6.0	3.8	1.3	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
DUF872	PF05915.7	gi|568163557|ref|YP_008946914.1|	-	3.2	7.6	7.7	0.2	11.4	0.9	1.9	1	1	1	2	2	2	0	Eukaryotic	protein	of	unknown	function	(DUF872)
DUF3169	PF11368.3	gi|568163557|ref|YP_008946914.1|	-	6	5.9	9.3	3.3e+02	0.3	6.5	2.0	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3169)
SSV1_ORF_D-335	PF07935.6	gi|568163558|ref|YP_008946915.1|	-	1.8e-21	75.6	1.6	2.2e-21	75.3	1.1	1.2	1	0	0	1	1	1	1	ORF	D-335-like	protein
Peptidase_M48	PF01435.13	gi|568163559|ref|YP_008946916.1|	-	2.9e-31	108.7	0.0	7.4e-31	107.4	0.0	1.6	1	1	0	1	1	1	1	Peptidase	family	M48
Peptidase_M56	PF05569.6	gi|568163559|ref|YP_008946916.1|	-	0.12	11.3	2.6	0.097	11.6	0.5	1.8	2	1	0	2	2	2	0	BlaR1	peptidase	M56
E1-E2_ATPase	PF00122.15	gi|568163560|ref|YP_008946917.1|	-	2.3e-54	183.8	2.1	3.8e-54	183.1	1.4	1.4	1	0	0	1	1	1	1	E1-E2	ATPase
Hydrolase	PF00702.21	gi|568163560|ref|YP_008946917.1|	-	6.7e-30	105.0	0.4	1.6e-29	103.8	0.3	1.7	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HMA	PF00403.21	gi|568163560|ref|YP_008946917.1|	-	3.9e-15	55.7	9.3	2.8e-13	49.8	2.0	3.1	2	0	0	2	2	2	2	Heavy-metal-associated	domain
HAD	PF12710.2	gi|568163560|ref|YP_008946917.1|	-	1.1e-10	42.0	0.2	3.4e-10	40.3	0.1	1.9	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.7	gi|568163560|ref|YP_008946917.1|	-	1.4e-06	28.0	2.5	0.026	14.1	0.1	3.1	2	1	1	3	3	3	2	haloacid	dehalogenase-like	hydrolase
NLPC_P60	PF00877.14	gi|568163560|ref|YP_008946917.1|	-	0.018	14.8	0.0	0.53	10.1	0.0	2.4	2	0	0	2	2	2	0	NlpC/P60	family
Hydrolase_6	PF13344.1	gi|568163560|ref|YP_008946917.1|	-	0.079	12.8	0.0	0.38	10.6	0.0	2.2	2	0	0	2	2	2	0	Haloacid	dehalogenase-like	hydrolase
YHS	PF04945.8	gi|568163561|ref|YP_008946918.1|	-	8.4e-20	70.3	2.9	1e-19	70.0	2.0	1.0	1	0	0	1	1	1	1	YHS	domain
Arc_trans_TRASH	PF08394.5	gi|568163561|ref|YP_008946918.1|	-	2.4e-05	24.4	2.1	3.3e-05	23.9	1.5	1.2	1	0	0	1	1	1	1	Archaeal	TRASH	domain
zf-FCS	PF06467.9	gi|568163561|ref|YP_008946918.1|	-	0.00066	19.2	2.0	0.0011	18.6	1.4	1.4	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
ATPase-cat_bd	PF12156.3	gi|568163561|ref|YP_008946918.1|	-	0.096	13.2	0.2	0.11	13.0	0.1	1.1	1	0	0	1	1	1	0	Putative	metal-binding	domain	of	cation	transport	ATPase
DUF2116	PF09889.4	gi|568163561|ref|YP_008946918.1|	-	0.14	11.9	2.0	0.4	10.5	1.4	1.8	1	1	0	1	1	1	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
Arc_trans_TRASH	PF08394.5	gi|568163562|ref|YP_008946919.1|	-	8e-20	70.7	8.7	1.7e-19	69.6	6.0	1.6	1	0	0	1	1	1	1	Archaeal	TRASH	domain
HTH_11	PF08279.7	gi|568163562|ref|YP_008946919.1|	-	2.9e-08	33.2	0.5	7.3e-08	31.9	0.4	1.6	1	0	0	1	1	1	1	HTH	domain
HTH_AsnC-type	PF13404.1	gi|568163562|ref|YP_008946919.1|	-	3.2e-06	26.5	0.2	5.7e-06	25.7	0.1	1.5	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_24	PF13412.1	gi|568163562|ref|YP_008946919.1|	-	6e-06	25.5	0.7	6e-06	25.5	0.5	1.7	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.2	gi|568163562|ref|YP_008946919.1|	-	7.3e-06	25.5	0.0	1.2e-05	24.9	0.0	1.3	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.17	gi|568163562|ref|YP_008946919.1|	-	4.7e-05	23.0	0.2	7.6e-05	22.3	0.1	1.3	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|568163562|ref|YP_008946919.1|	-	0.00011	21.8	0.1	0.00027	20.5	0.1	1.6	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_38	PF13936.1	gi|568163562|ref|YP_008946919.1|	-	0.0014	18.1	0.2	0.0037	16.7	0.1	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|568163562|ref|YP_008946919.1|	-	0.0024	17.4	0.1	0.0071	15.9	0.1	1.8	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_29	PF13551.1	gi|568163562|ref|YP_008946919.1|	-	0.0047	17.0	0.0	0.0076	16.3	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn	helix
Penicillinase_R	PF03965.11	gi|568163562|ref|YP_008946919.1|	-	0.0071	16.4	0.0	0.015	15.4	0.0	1.6	1	0	0	1	1	1	1	Penicillinase	repressor
HTH_6	PF01418.12	gi|568163562|ref|YP_008946919.1|	-	0.0081	15.8	0.4	0.016	14.9	0.3	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain,	rpiR	family
HTH_36	PF13730.1	gi|568163562|ref|YP_008946919.1|	-	0.0096	16.0	0.2	0.026	14.6	0.2	1.8	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_20	PF12840.2	gi|568163562|ref|YP_008946919.1|	-	0.01	15.6	0.0	0.01	15.6	0.0	1.9	3	0	0	3	3	2	1	Helix-turn-helix	domain
HTH_28	PF13518.1	gi|568163562|ref|YP_008946919.1|	-	0.015	15.2	0.2	0.042	13.8	0.1	1.9	2	0	0	2	2	1	0	Helix-turn-helix	domain
HTH_27	PF13463.1	gi|568163562|ref|YP_008946919.1|	-	0.015	15.5	0.1	0.023	14.9	0.1	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_5	PF01022.15	gi|568163562|ref|YP_008946919.1|	-	0.039	13.6	0.1	0.087	12.5	0.1	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
HTH_7	PF02796.10	gi|568163562|ref|YP_008946919.1|	-	0.041	13.7	0.1	0.12	12.2	0.1	1.8	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	resolvase
Mga	PF05043.8	gi|568163562|ref|YP_008946919.1|	-	0.045	14.0	0.7	0.087	13.1	0.1	1.7	2	0	0	2	2	1	0	Mga	helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|568163562|ref|YP_008946919.1|	-	0.073	13.0	0.2	0.15	12.0	0.1	1.5	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_Crp_2	PF13545.1	gi|568163562|ref|YP_008946919.1|	-	0.078	12.7	0.1	0.16	11.7	0.0	1.4	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
Trp_repressor	PF01371.14	gi|568163562|ref|YP_008946919.1|	-	0.084	12.7	0.2	0.25	11.2	0.1	1.8	1	0	0	1	1	1	0	Trp	repressor	protein
HTH_34	PF13601.1	gi|568163562|ref|YP_008946919.1|	-	0.1	12.6	0.2	0.21	11.6	0.0	1.6	2	0	0	2	2	1	0	Winged	helix	DNA-binding	domain
GntR	PF00392.16	gi|568163562|ref|YP_008946919.1|	-	0.11	11.8	0.0	0.25	10.7	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
DUF2250	PF10007.4	gi|568163562|ref|YP_008946919.1|	-	0.14	12.0	1.4	0.31	10.9	0.1	2.0	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_10	PF04967.7	gi|568163562|ref|YP_008946919.1|	-	0.19	11.3	2.1	0.66	9.6	0.4	2.5	3	0	0	3	3	3	0	HTH	DNA	binding	domain
HTH_40	PF14493.1	gi|568163562|ref|YP_008946919.1|	-	0.32	11.2	2.7	11	6.2	1.1	2.6	2	1	0	2	2	2	0	Helix-turn-helix	domain
zf-FCS	PF06467.9	gi|568163562|ref|YP_008946919.1|	-	8.3	6.1	9.3	3.3	7.4	3.9	2.2	2	1	1	3	3	2	0	MYM-type	Zinc	finger	with	FCS	sequence	motif
AAA	PF00004.24	gi|568163564|ref|YP_008946921.1|	-	9.5e-77	255.5	0.0	3.7e-37	127.4	0.0	2.6	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_17	PF13207.1	gi|568163564|ref|YP_008946921.1|	-	1.7e-19	70.8	0.7	3.9e-08	34.1	0.0	3.5	2	2	0	2	2	2	2	AAA	domain
RuvB_N	PF05496.7	gi|568163564|ref|YP_008946921.1|	-	1.6e-15	56.8	0.0	1.6e-08	33.8	0.0	2.7	2	0	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_22	PF13401.1	gi|568163564|ref|YP_008946921.1|	-	2.9e-15	56.5	4.9	0.00049	20.2	0.0	4.8	3	2	2	5	5	4	3	AAA	domain
AAA_14	PF13173.1	gi|568163564|ref|YP_008946921.1|	-	6.7e-15	55.1	0.0	1.9e-07	31.0	0.0	3.0	2	1	1	3	3	2	2	AAA	domain
AAA_18	PF13238.1	gi|568163564|ref|YP_008946921.1|	-	1.1e-13	51.6	0.0	1.1e-05	25.7	0.0	2.9	2	0	0	2	2	2	2	AAA	domain
AAA_5	PF07728.9	gi|568163564|ref|YP_008946921.1|	-	2.5e-13	49.9	0.3	7.3e-05	22.5	0.0	3.9	2	2	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
AAA_33	PF13671.1	gi|568163564|ref|YP_008946921.1|	-	5.6e-13	48.9	0.0	1.2e-05	25.2	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
TIP49	PF06068.8	gi|568163564|ref|YP_008946921.1|	-	3.4e-12	45.8	0.3	3.6e-05	22.6	0.1	2.7	3	0	0	3	3	2	2	TIP49	C-terminus
Zeta_toxin	PF06414.7	gi|568163564|ref|YP_008946921.1|	-	9.5e-12	44.4	0.0	3.9e-05	22.8	0.0	2.5	2	1	0	2	2	2	2	Zeta	toxin
DUF815	PF05673.8	gi|568163564|ref|YP_008946921.1|	-	2.1e-11	43.2	0.0	6.7e-05	21.9	0.0	2.4	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
AAA_16	PF13191.1	gi|568163564|ref|YP_008946921.1|	-	2.2e-10	40.8	0.2	8.8e-05	22.5	0.0	3.4	2	2	0	2	2	2	2	AAA	ATPase	domain
IstB_IS21	PF01695.12	gi|568163564|ref|YP_008946921.1|	-	1.1e-09	37.9	0.0	0.0009	18.6	0.0	2.6	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
AAA_2	PF07724.9	gi|568163564|ref|YP_008946921.1|	-	2.5e-09	37.2	0.0	3e-05	23.9	0.0	2.9	2	1	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
RNA_helicase	PF00910.17	gi|568163564|ref|YP_008946921.1|	-	5.6e-09	36.1	0.0	0.0019	18.3	0.0	3.1	3	0	0	3	3	2	2	RNA	helicase
AAA_28	PF13521.1	gi|568163564|ref|YP_008946921.1|	-	1.3e-08	35.0	0.0	0.0032	17.4	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
AAA_19	PF13245.1	gi|568163564|ref|YP_008946921.1|	-	4e-08	32.8	0.0	0.0092	15.7	0.0	2.6	2	0	0	2	2	2	2	Part	of	AAA	domain
AAA_25	PF13481.1	gi|568163564|ref|YP_008946921.1|	-	4.4e-08	32.7	3.8	0.18	11.1	0.1	4.2	3	1	1	4	4	4	2	AAA	domain
AAA_24	PF13479.1	gi|568163564|ref|YP_008946921.1|	-	5.4e-08	32.6	0.9	0.005	16.4	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
Arch_ATPase	PF01637.13	gi|568163564|ref|YP_008946921.1|	-	3.9e-07	30.0	0.2	0.16	11.6	0.0	3.7	2	2	1	3	3	3	2	Archaeal	ATPase
SKI	PF01202.17	gi|568163564|ref|YP_008946921.1|	-	4.4e-07	29.8	0.1	0.03	14.1	0.0	2.8	3	0	0	3	3	2	2	Shikimate	kinase
Mg_chelatase	PF01078.16	gi|568163564|ref|YP_008946921.1|	-	8.8e-07	28.2	0.0	0.031	13.4	0.0	2.4	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
Parvo_NS1	PF01057.12	gi|568163564|ref|YP_008946921.1|	-	1.2e-06	27.6	0.1	0.036	12.9	0.0	2.2	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
ABC_tran	PF00005.22	gi|568163564|ref|YP_008946921.1|	-	1.3e-06	28.7	0.0	0.064	13.5	0.0	2.5	2	0	0	2	2	2	2	ABC	transporter
Sigma54_activ_2	PF14532.1	gi|568163564|ref|YP_008946921.1|	-	2.1e-06	27.7	0.0	0.18	11.8	0.0	3.2	3	0	0	3	3	3	2	Sigma-54	interaction	domain
KTI12	PF08433.5	gi|568163564|ref|YP_008946921.1|	-	4e-06	26.2	0.0	0.087	12.0	0.0	2.7	2	0	0	2	2	2	2	Chromatin	associated	protein	KTI12
AAA_3	PF07726.6	gi|568163564|ref|YP_008946921.1|	-	8.4e-06	25.4	0.0	0.11	12.1	0.0	3.0	2	1	1	3	3	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
NTPase_1	PF03266.10	gi|568163564|ref|YP_008946921.1|	-	9.1e-06	25.4	1.1	0.45	10.2	0.0	4.2	3	1	1	4	4	4	2	NTPase
NACHT	PF05729.7	gi|568163564|ref|YP_008946921.1|	-	1.2e-05	25.0	0.3	0.43	10.2	0.0	3.8	3	1	1	4	4	4	2	NACHT	domain
Vps4_C	PF09336.5	gi|568163564|ref|YP_008946921.1|	-	1.2e-05	25.0	0.0	0.095	12.6	0.0	2.9	2	0	0	2	2	2	2	Vps4	C	terminal	oligomerisation	domain
UPF0079	PF02367.12	gi|568163564|ref|YP_008946921.1|	-	1.5e-05	24.5	0.0	0.13	11.9	0.0	2.7	2	0	0	2	2	2	2	Uncharacterised	P-loop	hydrolase	UPF0079
Bac_DnaA	PF00308.13	gi|568163564|ref|YP_008946921.1|	-	2.3e-05	24.1	0.0	0.021	14.5	0.0	3.1	2	1	0	2	2	2	1	Bacterial	dnaA	protein
CPT	PF07931.7	gi|568163564|ref|YP_008946921.1|	-	2.9e-05	23.7	0.0	0.076	12.6	0.0	2.3	2	0	0	2	2	2	2	Chloramphenicol	phosphotransferase-like	protein
AAA_11	PF13086.1	gi|568163564|ref|YP_008946921.1|	-	4.8e-05	23.0	0.0	0.22	11.0	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
PhoH	PF02562.11	gi|568163564|ref|YP_008946921.1|	-	7.8e-05	21.9	0.1	0.19	10.9	0.0	2.5	2	0	0	2	2	2	2	PhoH-like	protein
KaiC	PF06745.8	gi|568163564|ref|YP_008946921.1|	-	0.00012	21.3	3.4	2.3	7.2	0.0	4.3	2	2	2	4	4	4	0	KaiC
Sigma54_activat	PF00158.21	gi|568163564|ref|YP_008946921.1|	-	0.00017	21.0	0.0	1	8.8	0.0	3.1	4	0	0	4	4	2	2	Sigma-54	interaction	domain
AAA_30	PF13604.1	gi|568163564|ref|YP_008946921.1|	-	0.00018	21.1	0.0	0.73	9.3	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
NB-ARC	PF00931.17	gi|568163564|ref|YP_008946921.1|	-	0.0002	20.3	0.0	0.62	8.8	0.0	2.7	2	0	0	2	2	2	2	NB-ARC	domain
KAP_NTPase	PF07693.9	gi|568163564|ref|YP_008946921.1|	-	0.00022	20.3	1.3	0.6	9.0	0.0	3.7	2	2	2	4	4	4	1	KAP	family	P-loop	domain
Cytidylate_kin2	PF13189.1	gi|568163564|ref|YP_008946921.1|	-	0.00054	19.9	0.0	0.17	11.7	0.0	2.7	3	0	0	3	3	2	1	Cytidylate	kinase-like	family
DUF258	PF03193.11	gi|568163564|ref|YP_008946921.1|	-	0.00074	18.7	0.0	1.3	8.1	0.0	2.4	2	0	0	2	2	2	2	Protein	of	unknown	function,	DUF258
T2SE	PF00437.15	gi|568163564|ref|YP_008946921.1|	-	0.00082	18.3	0.0	0.43	9.4	0.0	2.4	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
IPT	PF01745.11	gi|568163564|ref|YP_008946921.1|	-	0.00086	18.5	0.1	0.24	10.5	0.0	2.3	2	0	0	2	2	2	1	Isopentenyl	transferase
AAA_23	PF13476.1	gi|568163564|ref|YP_008946921.1|	-	0.00093	19.5	5.5	0.47	10.7	0.1	2.9	1	1	1	2	2	2	2	AAA	domain
Guanylate_kin	PF00625.16	gi|568163564|ref|YP_008946921.1|	-	0.0014	18.1	0.0	1.7	8.0	0.0	2.8	3	0	0	3	3	2	1	Guanylate	kinase
MMR_HSR1	PF01926.18	gi|568163564|ref|YP_008946921.1|	-	0.0016	18.4	0.0	2.8	7.9	0.0	2.8	2	0	0	2	2	2	0	50S	ribosome-binding	GTPase
AAA_10	PF12846.2	gi|568163564|ref|YP_008946921.1|	-	0.0019	17.6	0.8	6.3	6.1	0.0	4.0	3	1	1	4	4	4	0	AAA-like	domain
ATP-synt_ab	PF00006.20	gi|568163564|ref|YP_008946921.1|	-	0.0019	17.7	0.0	1.3	8.5	0.0	2.3	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ResIII	PF04851.10	gi|568163564|ref|YP_008946921.1|	-	0.0021	17.9	0.0	2.2	8.0	0.0	2.5	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
PduV-EutP	PF10662.4	gi|568163564|ref|YP_008946921.1|	-	0.0024	17.3	0.0	2.6	7.5	0.0	2.5	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
APS_kinase	PF01583.15	gi|568163564|ref|YP_008946921.1|	-	0.0026	17.4	0.0	1.5	8.4	0.0	2.5	2	0	0	2	2	2	1	Adenylylsulphate	kinase
Rad17	PF03215.10	gi|568163564|ref|YP_008946921.1|	-	0.0037	16.0	0.0	1.4	7.5	0.0	2.3	2	0	0	2	2	2	1	Rad17	cell	cycle	checkpoint	protein
DUF2075	PF09848.4	gi|568163564|ref|YP_008946921.1|	-	0.0038	16.2	0.0	1.1	8.1	0.0	2.3	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
6PF2K	PF01591.13	gi|568163564|ref|YP_008946921.1|	-	0.0039	16.2	0.1	0.12	11.4	0.0	2.4	2	0	0	2	2	2	1	6-phosphofructo-2-kinase
MobB	PF03205.9	gi|568163564|ref|YP_008946921.1|	-	0.004	16.8	0.0	3.2	7.4	0.0	2.6	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_21	PF13304.1	gi|568163564|ref|YP_008946921.1|	-	0.0082	16.1	12.0	0.28	11.1	0.5	3.6	3	2	0	3	3	2	2	AAA	domain
AAA_29	PF13555.1	gi|568163564|ref|YP_008946921.1|	-	0.0088	15.5	0.1	3.8	7.0	0.0	2.5	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
PPV_E1_C	PF00519.12	gi|568163564|ref|YP_008946921.1|	-	0.01	14.4	0.0	2	6.9	0.0	2.2	2	0	0	2	2	2	0	Papillomavirus	helicase
Miro	PF08477.8	gi|568163564|ref|YP_008946921.1|	-	0.011	16.1	0.0	11	6.5	0.0	3.1	2	1	0	2	2	2	0	Miro-like	protein
SRP54	PF00448.17	gi|568163564|ref|YP_008946921.1|	-	0.018	14.5	0.0	4.3	6.7	0.0	2.6	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
Torsin	PF06309.6	gi|568163564|ref|YP_008946921.1|	-	0.029	14.2	0.0	4.3	7.2	0.0	2.3	2	0	0	2	2	2	0	Torsin
ADK	PF00406.17	gi|568163564|ref|YP_008946921.1|	-	0.029	14.2	0.0	7	6.5	0.0	2.6	2	0	0	2	2	2	0	Adenylate	kinase
cobW	PF02492.14	gi|568163564|ref|YP_008946921.1|	-	0.037	13.4	0.2	4.1	6.8	0.0	2.5	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
Gtr1_RagA	PF04670.7	gi|568163564|ref|YP_008946921.1|	-	0.064	12.3	0.5	10	5.1	0.0	3.0	4	0	0	4	4	2	0	Gtr1/RagA	G	protein	conserved	region
Thymidylate_kin	PF02223.12	gi|568163564|ref|YP_008946921.1|	-	0.065	12.6	0.0	4.8	6.5	0.0	2.4	2	0	0	2	2	2	0	Thymidylate	kinase
SRPRB	PF09439.5	gi|568163564|ref|YP_008946921.1|	-	0.07	12.3	0.0	13	4.9	0.0	2.5	2	0	0	2	2	2	0	Signal	recognition	particle	receptor	beta	subunit
Viral_helicase1	PF01443.13	gi|568163564|ref|YP_008946921.1|	-	0.072	12.5	0.0	11	5.3	0.0	2.3	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
MCM	PF00493.18	gi|568163564|ref|YP_008946921.1|	-	0.09	11.5	0.1	6.2	5.5	0.0	2.9	3	0	0	3	3	3	0	MCM2/3/5	family
ArgK	PF03308.11	gi|568163564|ref|YP_008946921.1|	-	0.11	11.2	0.0	2.6	6.7	0.0	2.2	2	0	0	2	2	2	0	ArgK	protein
DUF2540	PF10802.3	gi|568163564|ref|YP_008946921.1|	-	9.8	5.9	10.1	5.9	6.6	0.7	4.1	4	1	1	5	5	3	0	Protein	of	unknown	function	(DUF2540)
DUF445	PF04286.7	gi|568163565|ref|YP_008946922.1|	-	0.57	9.6	1.7	0.76	9.2	1.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF445)
SPW	PF03779.9	gi|568163565|ref|YP_008946922.1|	-	4.5	6.7	10.8	0.3	10.5	1.7	3.0	3	0	0	3	3	3	0	SPW	repeat
ABC_tran	PF00005.22	gi|568163567|ref|YP_008946924.1|	-	4.4e-30	104.7	0.1	1.9e-14	54.1	0.0	3.3	2	1	1	3	3	3	3	ABC	transporter
AAA_21	PF13304.1	gi|568163567|ref|YP_008946924.1|	-	2.4e-17	63.8	17.0	4.5e-06	26.8	0.0	4.6	2	2	2	5	5	5	4	AAA	domain
AAA_22	PF13401.1	gi|568163567|ref|YP_008946924.1|	-	3.7e-08	33.5	0.1	0.00056	20.0	0.0	2.6	2	1	0	2	2	2	2	AAA	domain
NB-ARC	PF00931.17	gi|568163567|ref|YP_008946924.1|	-	1e-07	31.1	0.0	0.0038	16.1	0.0	2.4	2	0	0	2	2	2	2	NB-ARC	domain
AAA_15	PF13175.1	gi|568163567|ref|YP_008946924.1|	-	2.8e-07	29.9	15.8	0.0041	16.2	0.3	3.2	1	1	2	3	3	3	2	AAA	ATPase	domain
AAA_29	PF13555.1	gi|568163567|ref|YP_008946924.1|	-	1.2e-06	27.9	0.1	0.018	14.5	0.0	2.4	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
AAA_17	PF13207.1	gi|568163567|ref|YP_008946924.1|	-	1.6e-06	28.9	2.9	0.016	16.0	0.0	2.9	2	1	0	2	2	2	2	AAA	domain
Miro	PF08477.8	gi|568163567|ref|YP_008946924.1|	-	1.9e-06	28.3	0.0	0.054	14.0	0.0	2.5	2	0	0	2	2	2	2	Miro-like	protein
MobB	PF03205.9	gi|568163567|ref|YP_008946924.1|	-	3e-06	26.9	3.1	0.033	13.9	0.0	2.9	3	0	0	3	3	2	2	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
SRP54	PF00448.17	gi|568163567|ref|YP_008946924.1|	-	3e-06	26.8	0.4	0.016	14.6	0.1	2.4	2	0	0	2	2	2	2	SRP54-type	protein,	GTPase	domain
UPF0079	PF02367.12	gi|568163567|ref|YP_008946924.1|	-	9.8e-06	25.2	0.1	0.15	11.6	0.0	2.5	2	0	0	2	2	2	2	Uncharacterised	P-loop	hydrolase	UPF0079
NACHT	PF05729.7	gi|568163567|ref|YP_008946924.1|	-	1.1e-05	25.2	1.2	0.045	13.4	0.0	2.6	2	1	0	2	2	2	2	NACHT	domain
SMC_N	PF02463.14	gi|568163567|ref|YP_008946924.1|	-	3.3e-05	23.2	5.6	0.095	11.9	0.1	3.8	3	1	0	4	4	4	2	RecF/RecN/SMC	N	terminal	domain
Arch_ATPase	PF01637.13	gi|568163567|ref|YP_008946924.1|	-	4.5e-05	23.2	3.8	0.018	14.7	0.1	2.8	2	1	0	2	2	2	2	Archaeal	ATPase
AAA_14	PF13173.1	gi|568163567|ref|YP_008946924.1|	-	4.8e-05	23.2	5.6	0.018	14.9	0.1	3.4	2	2	0	2	2	2	2	AAA	domain
AAA_16	PF13191.1	gi|568163567|ref|YP_008946924.1|	-	5.3e-05	23.2	0.1	0.12	12.3	0.0	2.3	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA	PF00004.24	gi|568163567|ref|YP_008946924.1|	-	5.3e-05	23.4	3.0	0.027	14.6	0.1	3.1	2	2	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_24	PF13479.1	gi|568163567|ref|YP_008946924.1|	-	8.4e-05	22.2	0.0	0.12	11.9	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
Zeta_toxin	PF06414.7	gi|568163567|ref|YP_008946924.1|	-	9.6e-05	21.5	0.0	0.031	13.3	0.0	2.6	2	0	0	2	2	2	1	Zeta	toxin
AAA_33	PF13671.1	gi|568163567|ref|YP_008946924.1|	-	0.00012	22.0	0.0	0.11	12.4	0.1	2.4	2	1	0	2	2	2	2	AAA	domain
DUF258	PF03193.11	gi|568163567|ref|YP_008946924.1|	-	0.00012	21.3	0.0	0.1	11.7	0.0	2.3	2	0	0	2	2	2	2	Protein	of	unknown	function,	DUF258
Pox_A32	PF04665.7	gi|568163567|ref|YP_008946924.1|	-	0.00021	20.6	0.1	0.51	9.6	0.0	2.5	2	0	0	2	2	2	2	Poxvirus	A32	protein
AAA_19	PF13245.1	gi|568163567|ref|YP_008946924.1|	-	0.00021	20.9	0.0	0.44	10.3	0.0	2.4	2	0	0	2	2	2	2	Part	of	AAA	domain
AAA_10	PF12846.2	gi|568163567|ref|YP_008946924.1|	-	0.00029	20.3	0.0	0.43	9.9	0.0	2.4	2	0	0	2	2	2	2	AAA-like	domain
MMR_HSR1	PF01926.18	gi|568163567|ref|YP_008946924.1|	-	0.00032	20.6	1.9	0.45	10.4	0.0	2.7	2	1	0	2	2	2	2	50S	ribosome-binding	GTPase
cobW	PF02492.14	gi|568163567|ref|YP_008946924.1|	-	0.00041	19.8	0.5	0.045	13.2	0.1	2.3	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
NTPase_1	PF03266.10	gi|568163567|ref|YP_008946924.1|	-	0.00094	18.9	5.9	0.72	9.5	0.2	3.5	2	1	1	3	3	3	2	NTPase
AAA_18	PF13238.1	gi|568163567|ref|YP_008946924.1|	-	0.001	19.3	6.6	0.066	13.5	0.0	3.1	2	2	0	2	2	2	1	AAA	domain
RNA_helicase	PF00910.17	gi|568163567|ref|YP_008946924.1|	-	0.0016	18.6	0.0	0.86	9.8	0.0	2.8	2	0	0	2	2	2	1	RNA	helicase
PduV-EutP	PF10662.4	gi|568163567|ref|YP_008946924.1|	-	0.0016	17.9	1.0	1	8.8	0.0	2.7	3	0	0	3	3	3	1	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_25	PF13481.1	gi|568163567|ref|YP_008946924.1|	-	0.0017	17.7	0.0	0.56	9.5	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
Viral_helicase1	PF01443.13	gi|568163567|ref|YP_008946924.1|	-	0.0022	17.5	0.0	0.89	9.0	0.0	2.3	2	0	0	2	2	2	1	Viral	(Superfamily	1)	RNA	helicase
AAA_5	PF07728.9	gi|568163567|ref|YP_008946924.1|	-	0.003	17.2	0.2	1.6	8.4	0.0	2.6	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_30	PF13604.1	gi|568163567|ref|YP_008946924.1|	-	0.0051	16.4	0.0	3.3	7.2	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
G-alpha	PF00503.15	gi|568163567|ref|YP_008946924.1|	-	0.006	15.3	0.0	0.15	10.7	0.0	2.1	2	0	0	2	2	2	1	G-protein	alpha	subunit
T2SE	PF00437.15	gi|568163567|ref|YP_008946924.1|	-	0.0073	15.2	0.1	2.4	6.9	0.0	2.4	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
AAA_23	PF13476.1	gi|568163567|ref|YP_008946924.1|	-	0.008	16.5	14.7	1.8	8.8	0.2	3.1	1	1	1	2	2	2	2	AAA	domain
AAA_28	PF13521.1	gi|568163567|ref|YP_008946924.1|	-	0.0087	16.0	0.0	1.5	8.7	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
TrwB_AAD_bind	PF10412.4	gi|568163567|ref|YP_008946924.1|	-	0.013	14.0	0.0	2.9	6.3	0.0	3.0	3	0	0	3	3	3	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
GTP_EFTU	PF00009.22	gi|568163567|ref|YP_008946924.1|	-	0.018	14.4	0.0	0.92	8.9	0.0	2.4	2	0	0	2	2	2	0	Elongation	factor	Tu	GTP	binding	domain
SbcCD_C	PF13558.1	gi|568163567|ref|YP_008946924.1|	-	0.027	14.3	0.0	0.26	11.2	0.0	2.5	2	2	0	2	2	2	0	Putative	exonuclease	SbcCD,	C	subunit
ArgK	PF03308.11	gi|568163567|ref|YP_008946924.1|	-	0.062	12.0	0.0	5.7	5.6	0.0	2.2	2	0	0	2	2	2	0	ArgK	protein
PhoH	PF02562.11	gi|568163567|ref|YP_008946924.1|	-	0.087	12.0	0.1	1.8	7.7	0.0	2.4	2	0	0	2	2	2	0	PhoH-like	protein
ATP-synt_ab	PF00006.20	gi|568163567|ref|YP_008946924.1|	-	0.1	12.0	0.0	2.8	7.3	0.0	2.2	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
Septin	PF00735.13	gi|568163567|ref|YP_008946924.1|	-	0.38	9.7	4.2	7.9	5.3	0.1	2.7	3	1	0	3	3	2	0	Septin
HTH_45	PF14947.1	gi|568163569|ref|YP_008946926.1|	-	1.8e-28	98.1	5.3	2.2e-28	97.8	3.6	1.1	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_24	PF13412.1	gi|568163569|ref|YP_008946926.1|	-	0.00022	20.5	1.7	0.00036	19.8	0.2	1.9	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
DUF4364	PF14277.1	gi|568163569|ref|YP_008946926.1|	-	0.0014	18.2	0.4	0.0016	18.0	0.3	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4364)
Topoisom_bac	PF01131.15	gi|568163569|ref|YP_008946926.1|	-	0.011	14.6	0.3	0.014	14.2	0.2	1.1	1	0	0	1	1	1	0	DNA	topoisomerase
DUF3116	PF11313.3	gi|568163569|ref|YP_008946926.1|	-	0.053	13.1	0.8	3.7	7.2	0.0	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3116)
DUF2119	PF09892.4	gi|568163569|ref|YP_008946926.1|	-	0.089	12.0	0.4	0.22	10.8	0.1	1.6	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2119)
DUF3993	PF13158.1	gi|568163569|ref|YP_008946926.1|	-	0.12	12.1	0.1	0.15	11.9	0.1	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3993)
Ammonium_transp	PF00909.16	gi|568163570|ref|YP_008946927.1|	-	4.1e-95	318.5	24.9	5e-95	318.3	17.3	1.1	1	0	0	1	1	1	1	Ammonium	Transporter	Family
Metallophos	PF00149.23	gi|568163571|ref|YP_008946928.1|	-	1.2e-22	80.2	0.5	1.6e-22	79.8	0.4	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|568163571|ref|YP_008946928.1|	-	3.8e-07	30.0	0.0	4.3e-07	29.9	0.0	1.3	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
MR_MLE_C	PF13378.1	gi|568163572|ref|YP_008946929.1|	-	1.2e-22	79.9	0.0	2e-22	79.2	0.0	1.4	1	0	0	1	1	1	1	Enolase	C-terminal	domain-like
MR_MLE_N	PF02746.11	gi|568163572|ref|YP_008946929.1|	-	6.8e-15	55.0	0.0	1.6e-14	53.9	0.0	1.6	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	N-terminal	domain
MR_MLE	PF01188.16	gi|568163572|ref|YP_008946929.1|	-	2.7e-12	47.0	0.3	7.1e-12	45.6	0.0	1.9	2	0	0	2	2	2	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
Sugar_tr	PF00083.19	gi|568163573|ref|YP_008946930.1|	-	2.7e-54	184.4	24.7	3.3e-54	184.1	17.1	1.1	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|568163573|ref|YP_008946930.1|	-	1.5e-30	106.1	37.1	2.3e-25	89.0	22.1	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
BT1	PF03092.11	gi|568163573|ref|YP_008946930.1|	-	0.1	11.2	9.1	0.089	11.4	4.8	2.0	1	1	1	2	2	2	0	BT1	family
Usp	PF00582.21	gi|568163574|ref|YP_008946931.1|	-	2.3e-27	95.8	0.3	2.7e-27	95.6	0.2	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
BEN	PF10523.4	gi|568163574|ref|YP_008946931.1|	-	0.03	14.3	0.1	0.041	13.9	0.1	1.3	1	0	0	1	1	1	0	BEN	domain
Amidohydro_1	PF01979.15	gi|568163575|ref|YP_008946932.1|	-	1.8e-31	110.0	0.0	2.4e-31	109.6	0.0	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.6	gi|568163575|ref|YP_008946932.1|	-	9.1e-10	38.3	0.0	2.1e-07	30.5	0.0	2.6	1	1	1	2	2	2	2	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|568163575|ref|YP_008946932.1|	-	1.1e-09	38.7	0.0	1.1e-08	35.4	0.0	2.1	1	1	0	1	1	1	1	Amidohydrolase
Amidohydro_5	PF13594.1	gi|568163575|ref|YP_008946932.1|	-	4.5e-09	35.9	1.5	1.2e-08	34.6	0.2	2.4	2	1	0	2	2	2	1	Amidohydrolase
A_deaminase	PF00962.17	gi|568163575|ref|YP_008946932.1|	-	0.00072	18.5	0.0	0.0014	17.6	0.0	1.4	1	0	0	1	1	1	1	Adenosine/AMP	deaminase
UPF0147	PF03685.8	gi|568163576|ref|YP_008946933.1|	-	9.2e-40	134.4	1.8	1e-39	134.2	1.3	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0147)
UPF0253	PF06786.7	gi|568163576|ref|YP_008946933.1|	-	0.0023	17.9	0.1	0.22	11.6	0.0	2.2	1	1	1	2	2	2	2	Uncharacterised	protein	family	(UPF0253)
HEAT_2	PF13646.1	gi|568163576|ref|YP_008946933.1|	-	0.026	14.7	0.2	0.081	13.2	0.1	1.9	1	1	0	1	1	1	0	HEAT	repeats
Auto_anti-p27	PF06677.7	gi|568163577|ref|YP_008946934.1|	-	1.1e-17	63.4	0.3	1.7e-17	62.9	0.2	1.3	1	0	0	1	1	1	1	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
DUF592	PF04574.8	gi|568163577|ref|YP_008946934.1|	-	0.015	14.8	1.1	0.02	14.4	0.7	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF592)
RPA_interact_C	PF14768.1	gi|568163577|ref|YP_008946934.1|	-	0.035	14.4	0.1	0.047	14.0	0.0	1.3	1	0	0	1	1	1	0	Replication	protein	A	interacting	C-terminal
Cdc6_C	PF09079.6	gi|568163577|ref|YP_008946934.1|	-	0.07	12.8	0.0	0.12	12.1	0.0	1.3	1	0	0	1	1	1	0	CDC6,	C	terminal
ArsC	PF03960.10	gi|568163577|ref|YP_008946934.1|	-	0.077	13.0	0.2	0.48	10.5	0.1	2.0	2	0	0	2	2	2	0	ArsC	family
Thymidylate_kin	PF02223.12	gi|568163578|ref|YP_008946935.1|	-	8.5e-41	139.3	0.2	9.8e-41	139.1	0.1	1.0	1	0	0	1	1	1	1	Thymidylate	kinase
AAA_18	PF13238.1	gi|568163578|ref|YP_008946935.1|	-	1e-05	25.8	2.4	1.8e-05	25.0	0.2	2.2	1	1	1	2	2	2	1	AAA	domain
dNK	PF01712.14	gi|568163578|ref|YP_008946935.1|	-	3.1e-05	23.9	0.9	4.8e-05	23.3	0.6	1.3	1	0	0	1	1	1	1	Deoxynucleoside	kinase
SKI	PF01202.17	gi|568163578|ref|YP_008946935.1|	-	0.0029	17.4	0.2	0.25	11.2	0.1	2.1	2	0	0	2	2	2	1	Shikimate	kinase
AAA_17	PF13207.1	gi|568163578|ref|YP_008946935.1|	-	0.016	16.0	1.5	0.051	14.3	1.0	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_33	PF13671.1	gi|568163578|ref|YP_008946935.1|	-	0.031	14.1	0.0	1.1	9.1	0.0	2.6	2	1	1	3	3	3	0	AAA	domain
Gtr1_RagA	PF04670.7	gi|568163578|ref|YP_008946935.1|	-	0.049	12.7	1.4	0.35	9.9	0.0	2.1	2	0	0	2	2	2	0	Gtr1/RagA	G	protein	conserved	region
PAD	PF03068.10	gi|568163578|ref|YP_008946935.1|	-	0.052	11.9	0.0	0.077	11.4	0.0	1.2	1	0	0	1	1	1	0	Protein-arginine	deiminase	(PAD)
NB-ARC	PF00931.17	gi|568163578|ref|YP_008946935.1|	-	0.06	12.2	0.0	0.085	11.6	0.0	1.3	1	0	0	1	1	1	0	NB-ARC	domain
APS_kinase	PF01583.15	gi|568163578|ref|YP_008946935.1|	-	0.12	12.0	0.0	0.21	11.2	0.0	1.4	1	0	0	1	1	1	0	Adenylylsulphate	kinase
XhlA	PF10779.4	gi|568163578|ref|YP_008946935.1|	-	0.23	11.3	2.8	0.39	10.6	2.0	1.3	1	0	0	1	1	1	0	Haemolysin	XhlA
AAA_33	PF13671.1	gi|568163579|ref|YP_008946936.1|	-	0.047	13.5	0.0	0.074	12.9	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
MobB	PF03205.9	gi|568163579|ref|YP_008946936.1|	-	0.094	12.4	0.1	0.44	10.2	0.0	2.2	1	1	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_17	PF13207.1	gi|568163579|ref|YP_008946936.1|	-	0.097	13.4	0.2	0.24	12.1	0.1	1.8	1	1	0	1	1	1	0	AAA	domain
MMR_HSR1	PF01926.18	gi|568163579|ref|YP_008946936.1|	-	0.099	12.6	0.6	0.25	11.3	0.3	1.9	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_24	PF13479.1	gi|568163581|ref|YP_008946938.1|	-	6.9e-06	25.7	0.0	9.1e-06	25.3	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
AAA_25	PF13481.1	gi|568163581|ref|YP_008946938.1|	-	4.2e-05	23.0	0.0	0.001	18.5	0.0	2.2	1	1	0	1	1	1	1	AAA	domain
KaiC	PF06745.8	gi|568163581|ref|YP_008946938.1|	-	4.2e-05	22.7	1.0	0.00028	20.0	0.7	1.9	1	1	0	1	1	1	1	KaiC
AAA	PF00004.24	gi|568163581|ref|YP_008946938.1|	-	0.0039	17.3	0.1	0.0049	17.0	0.1	1.3	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF2075	PF09848.4	gi|568163581|ref|YP_008946938.1|	-	0.0068	15.4	0.1	0.0068	15.4	0.1	1.2	1	1	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
ABC_tran	PF00005.22	gi|568163581|ref|YP_008946938.1|	-	0.0094	16.2	0.1	0.013	15.7	0.1	1.3	1	1	0	1	1	1	1	ABC	transporter
RecA	PF00154.16	gi|568163581|ref|YP_008946938.1|	-	0.011	14.8	0.0	0.015	14.3	0.0	1.2	1	0	0	1	1	1	0	recA	bacterial	DNA	recombination	protein
AAA_22	PF13401.1	gi|568163581|ref|YP_008946938.1|	-	0.014	15.5	1.7	0.055	13.6	1.2	1.8	1	1	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.17	gi|568163581|ref|YP_008946938.1|	-	0.022	14.9	0.1	0.052	13.7	0.0	1.6	1	1	0	1	1	1	0	RNA	helicase
Arch_ATPase	PF01637.13	gi|568163581|ref|YP_008946938.1|	-	0.027	14.1	0.6	0.039	13.6	0.4	1.2	1	0	0	1	1	1	0	Archaeal	ATPase
AAA_17	PF13207.1	gi|568163581|ref|YP_008946938.1|	-	0.033	14.9	0.2	0.065	14.0	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_18	PF13238.1	gi|568163581|ref|YP_008946938.1|	-	0.045	14.0	0.4	0.072	13.4	0.3	1.5	1	1	0	1	1	1	0	AAA	domain
Delta_lysin	PF05372.6	gi|568163581|ref|YP_008946938.1|	-	0.051	12.9	0.3	0.13	11.5	0.2	1.7	1	0	0	1	1	1	0	Delta	lysin	family
AAA_16	PF13191.1	gi|568163581|ref|YP_008946938.1|	-	0.091	12.7	0.0	0.12	12.3	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_21	PF13304.1	gi|568163581|ref|YP_008946938.1|	-	0.2	11.6	6.0	0.81	9.5	4.2	1.9	1	1	0	1	1	1	0	AAA	domain
DUF46	PF01864.12	gi|568163582|ref|YP_008946939.1|	-	3e-42	144.4	8.4	1.3e-41	142.4	5.8	1.7	1	1	0	1	1	1	1	Putative	integral	membrane	protein	DUF46
CTP_transf_1	PF01148.15	gi|568163582|ref|YP_008946939.1|	-	0.00055	19.6	3.0	0.00055	19.6	2.1	2.2	1	1	0	2	2	2	1	Cytidylyltransferase	family
DUF1275	PF06912.6	gi|568163582|ref|YP_008946939.1|	-	0.57	9.3	7.2	0.49	9.5	0.8	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1275)
DUF347	PF03988.7	gi|568163582|ref|YP_008946939.1|	-	1.1	9.1	8.6	1.3	8.9	0.0	3.4	3	1	0	3	3	3	0	Repeat	of	Unknown	Function	(DUF347)
Acyl_transf_3	PF01757.17	gi|568163583|ref|YP_008946940.1|	-	0.0098	14.7	7.2	0.012	14.5	5.0	1.1	1	0	0	1	1	1	1	Acyltransferase	family
EpsG	PF14897.1	gi|568163583|ref|YP_008946940.1|	-	0.013	14.4	7.6	0.015	14.2	5.3	1.0	1	0	0	1	1	1	0	EpsG	family
MHC2-interact	PF09307.5	gi|568163583|ref|YP_008946940.1|	-	0.13	12.0	0.1	0.2	11.4	0.1	1.3	1	0	0	1	1	1	0	CLIP,	MHC2	interacting
DUF3112	PF11309.3	gi|568163583|ref|YP_008946940.1|	-	1.3	8.8	11.3	1.5	8.6	4.0	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3112)
MARVEL	PF01284.18	gi|568163583|ref|YP_008946940.1|	-	1.7	8.4	9.9	2.1	8.1	6.9	1.1	1	0	0	1	1	1	0	Membrane-associating	domain
O-antigen_lig	PF13425.1	gi|568163583|ref|YP_008946940.1|	-	3.5	7.6	13.2	0.51	10.3	3.2	2.1	1	1	1	2	2	2	0	O-antigen	ligase	like	membrane	protein
TRIQK	PF15168.1	gi|568163583|ref|YP_008946940.1|	-	4.1	7.3	4.8	0.84	9.6	0.1	2.1	2	1	0	2	2	2	0	Triple	QxxK/R	motif-containing	protein	family
SdpI	PF13630.1	gi|568163583|ref|YP_008946940.1|	-	4.5	7.0	13.8	0.71	9.6	3.1	2.2	2	0	0	2	2	2	0	SdpI/YhfL	protein	family
Cytochrom_B_N	PF00033.14	gi|568163583|ref|YP_008946940.1|	-	5.3	6.3	9.4	0.59	9.4	1.2	2.3	1	1	1	2	2	2	0	Cytochrome	b(N-terminal)/b6/petB
DUF3990	PF13151.1	gi|568163584|ref|YP_008946941.1|	-	0.052	12.9	0.0	0.065	12.6	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3990)
MlrC_C	PF07171.7	gi|568163584|ref|YP_008946941.1|	-	0.093	12.2	0.0	0.097	12.2	0.0	1.0	1	0	0	1	1	1	0	MlrC	C-terminus
MCM	PF00493.18	gi|568163585|ref|YP_008946942.1|	-	4e-136	453.1	0.4	5.5e-136	452.7	0.3	1.2	1	0	0	1	1	1	1	MCM2/3/5	family
MCM_N	PF14551.1	gi|568163585|ref|YP_008946942.1|	-	2.7e-23	82.7	0.6	2.7e-23	82.7	0.4	2.1	3	0	0	3	3	3	1	MCM	N-terminal	domain
AAA_5	PF07728.9	gi|568163585|ref|YP_008946942.1|	-	3.8e-08	33.1	0.1	1.1e-07	31.6	0.0	1.8	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
Mg_chelatase	PF01078.16	gi|568163585|ref|YP_008946942.1|	-	9.2e-07	28.2	0.1	9.8e-05	21.6	0.1	2.4	1	1	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
Sigma54_activat	PF00158.21	gi|568163585|ref|YP_008946942.1|	-	2.3e-05	23.9	0.2	0.00037	20.0	0.1	2.3	1	1	0	1	1	1	1	Sigma-54	interaction	domain
AAA_3	PF07726.6	gi|568163585|ref|YP_008946942.1|	-	3.2e-05	23.5	0.0	6.9e-05	22.4	0.0	1.5	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF4325	PF14213.1	gi|568163585|ref|YP_008946942.1|	-	0.011	15.3	0.3	0.062	12.9	0.0	2.5	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4325)
DUF3987	PF13148.1	gi|568163585|ref|YP_008946942.1|	-	0.019	13.5	0.1	0.46	8.9	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3987)
ANT	PF03374.9	gi|568163585|ref|YP_008946942.1|	-	0.044	13.8	0.0	0.1	12.6	0.0	1.6	1	0	0	1	1	1	0	Phage	antirepressor	protein	KilAC	domain
HEPN	PF05168.9	gi|568163585|ref|YP_008946942.1|	-	0.34	10.7	3.1	1.8	8.5	0.1	2.8	3	0	0	3	3	3	0	HEPN	domain
Sld5	PF05916.6	gi|568163586|ref|YP_008946943.1|	-	1.1e-08	35.3	0.6	1.4e-08	34.9	0.4	1.2	1	0	0	1	1	1	1	GINS	complex	protein
p31comet	PF06581.7	gi|568163586|ref|YP_008946943.1|	-	0.11	11.3	0.1	0.15	10.9	0.0	1.1	1	0	0	1	1	1	0	Mad1	and	Cdc20-bound-Mad2	binding
THUMP	PF02926.12	gi|568163587|ref|YP_008946944.1|	-	9.5e-11	41.7	1.2	1.2e-10	41.4	0.8	1.1	1	0	0	1	1	1	1	THUMP	domain
Cdc6_C	PF09079.6	gi|568163588|ref|YP_008946945.1|	-	7.9e-21	73.5	0.0	2.5e-20	71.9	0.0	1.9	1	0	0	1	1	1	1	CDC6,	C	terminal
AAA_22	PF13401.1	gi|568163588|ref|YP_008946945.1|	-	3.7e-14	53.0	0.6	1.6e-13	50.9	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|568163588|ref|YP_008946945.1|	-	0.00013	22.0	1.0	0.0041	17.1	0.2	2.7	2	1	0	2	2	2	1	AAA	ATPase	domain
AAA_18	PF13238.1	gi|568163588|ref|YP_008946945.1|	-	0.014	15.6	0.0	0.066	13.5	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
NACHT	PF05729.7	gi|568163588|ref|YP_008946945.1|	-	0.048	13.3	0.0	0.095	12.3	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
AIG1	PF04548.11	gi|568163588|ref|YP_008946945.1|	-	0.091	11.8	0.0	0.19	10.8	0.0	1.5	1	0	0	1	1	1	0	AIG1	family
AAA_17	PF13207.1	gi|568163588|ref|YP_008946945.1|	-	0.2	12.5	0.9	0.61	10.9	0.4	2.1	1	1	0	2	2	2	0	AAA	domain
TrmB	PF01978.14	gi|568163589|ref|YP_008946946.1|	-	7.1e-05	22.4	0.3	8.6e-05	22.1	0.2	1.2	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
Rrf2	PF02082.15	gi|568163589|ref|YP_008946946.1|	-	0.0012	18.8	0.1	0.0016	18.5	0.0	1.2	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_45	PF14947.1	gi|568163589|ref|YP_008946946.1|	-	0.0014	18.4	0.2	0.0018	18.0	0.2	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_Crp_2	PF13545.1	gi|568163589|ref|YP_008946946.1|	-	0.0031	17.2	0.1	0.0037	17.0	0.1	1.3	1	1	0	1	1	1	1	Crp-like	helix-turn-helix	domain
Ftsk_gamma	PF09397.5	gi|568163589|ref|YP_008946946.1|	-	0.04	13.6	0.1	0.052	13.2	0.1	1.2	1	0	0	1	1	1	0	Ftsk	gamma	domain
DUF1975	PF09318.5	gi|568163589|ref|YP_008946946.1|	-	0.054	13.0	0.2	0.054	13.0	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1975)
HTH_24	PF13412.1	gi|568163589|ref|YP_008946946.1|	-	0.055	12.8	0.6	0.09	12.1	0.4	1.4	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.17	gi|568163589|ref|YP_008946946.1|	-	0.059	13.0	0.1	0.085	12.5	0.0	1.3	1	0	0	1	1	1	0	MarR	family
DUF2582	PF10771.4	gi|568163589|ref|YP_008946946.1|	-	0.069	13.0	0.2	0.082	12.7	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2582)
Phage_rep_org_N	PF09681.5	gi|568163589|ref|YP_008946946.1|	-	0.074	12.6	0.1	0.097	12.2	0.1	1.2	1	1	0	1	1	1	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
GntR	PF00392.16	gi|568163589|ref|YP_008946946.1|	-	0.11	11.9	0.0	0.13	11.6	0.0	1.2	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
MoaC	PF01967.16	gi|568163590|ref|YP_008946947.1|	-	9.1e-50	167.8	3.4	1e-49	167.6	2.4	1.0	1	0	0	1	1	1	1	MoaC	family
AAA	PF00004.24	gi|568163591|ref|YP_008946948.1|	-	2.4e-18	66.5	0.2	1.2e-16	61.0	0.0	2.8	2	1	1	3	3	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.7	gi|568163591|ref|YP_008946948.1|	-	6e-11	41.8	0.0	1.4e-10	40.6	0.0	1.6	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
Rad17	PF03215.10	gi|568163591|ref|YP_008946948.1|	-	2.6e-09	36.2	0.4	2.5e-05	23.1	0.0	2.9	3	0	0	3	3	3	2	Rad17	cell	cycle	checkpoint	protein
AAA_14	PF13173.1	gi|568163591|ref|YP_008946948.1|	-	8.8e-09	35.3	0.0	9.6e-08	31.9	0.0	2.4	1	1	1	2	2	2	1	AAA	domain
AAA_5	PF07728.9	gi|568163591|ref|YP_008946948.1|	-	2.1e-08	34.0	0.0	8.3e-08	32.0	0.0	2.0	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_22	PF13401.1	gi|568163591|ref|YP_008946948.1|	-	2.8e-08	33.9	0.2	3.1e-06	27.3	0.0	3.6	2	1	0	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|568163591|ref|YP_008946948.1|	-	3.7e-08	34.1	1.7	7.8e-08	33.1	0.2	2.6	2	1	0	2	2	1	1	AAA	domain
DUF815	PF05673.8	gi|568163591|ref|YP_008946948.1|	-	4.4e-07	29.0	0.0	1.6e-06	27.2	0.0	1.9	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF815)
AAA_16	PF13191.1	gi|568163591|ref|YP_008946948.1|	-	9.8e-07	28.9	0.0	4.8e-06	26.6	0.0	2.3	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_18	PF13238.1	gi|568163591|ref|YP_008946948.1|	-	1.9e-05	24.9	2.4	4e-05	23.9	0.0	2.8	3	0	0	3	3	2	1	AAA	domain
AAA_2	PF07724.9	gi|568163591|ref|YP_008946948.1|	-	6.1e-05	22.9	0.0	0.00037	20.4	0.0	2.2	2	0	0	2	2	2	1	AAA	domain	(Cdc48	subfamily)
IstB_IS21	PF01695.12	gi|568163591|ref|YP_008946948.1|	-	7e-05	22.3	0.1	0.00028	20.3	0.0	2.1	2	1	0	2	2	1	1	IstB-like	ATP	binding	protein
TIP49	PF06068.8	gi|568163591|ref|YP_008946948.1|	-	0.00011	21.1	0.0	0.056	12.1	0.0	2.3	2	0	0	2	2	2	2	TIP49	C-terminus
AAA_24	PF13479.1	gi|568163591|ref|YP_008946948.1|	-	0.00021	20.9	0.0	0.0011	18.6	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
Arch_ATPase	PF01637.13	gi|568163591|ref|YP_008946948.1|	-	0.00025	20.8	0.1	0.00025	20.8	0.1	3.0	3	1	0	3	3	3	1	Archaeal	ATPase
AAA_33	PF13671.1	gi|568163591|ref|YP_008946948.1|	-	0.0005	19.9	0.0	0.0013	18.6	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
AAA_28	PF13521.1	gi|568163591|ref|YP_008946948.1|	-	0.00061	19.7	0.0	0.003	17.5	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_25	PF13481.1	gi|568163591|ref|YP_008946948.1|	-	0.00066	19.1	0.0	0.0041	16.5	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
ABC_tran	PF00005.22	gi|568163591|ref|YP_008946948.1|	-	0.00086	19.6	0.2	0.017	15.4	0.0	2.9	3	0	0	3	3	3	1	ABC	transporter
NACHT	PF05729.7	gi|568163591|ref|YP_008946948.1|	-	0.001	18.7	0.2	0.035	13.7	0.0	3.2	3	1	1	5	5	5	1	NACHT	domain
RNA_helicase	PF00910.17	gi|568163591|ref|YP_008946948.1|	-	0.0011	19.1	0.0	0.0041	17.2	0.0	2.1	2	0	0	2	2	1	1	RNA	helicase
NB-ARC	PF00931.17	gi|568163591|ref|YP_008946948.1|	-	0.0016	17.3	0.0	0.0068	15.2	0.0	1.9	2	0	0	2	2	2	1	NB-ARC	domain
DUF258	PF03193.11	gi|568163591|ref|YP_008946948.1|	-	0.0022	17.1	0.0	0.0051	16.0	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
Parvo_NS1	PF01057.12	gi|568163591|ref|YP_008946948.1|	-	0.0036	16.2	0.1	0.039	12.8	0.0	2.1	2	0	0	2	2	2	1	Parvovirus	non-structural	protein	NS1
KaiC	PF06745.8	gi|568163591|ref|YP_008946948.1|	-	0.0039	16.3	0.1	0.24	10.4	0.0	3.1	3	1	0	3	3	3	1	KaiC
DNA_pol3_delta	PF06144.8	gi|568163591|ref|YP_008946948.1|	-	0.0048	16.4	0.9	0.12	11.8	0.0	3.1	3	1	0	3	3	3	1	DNA	polymerase	III,	delta	subunit
AAA_19	PF13245.1	gi|568163591|ref|YP_008946948.1|	-	0.0054	16.4	0.0	0.012	15.3	0.0	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
AFG1_ATPase	PF03969.11	gi|568163591|ref|YP_008946948.1|	-	0.0056	15.5	0.0	2.1	7.0	0.0	2.8	2	1	1	3	3	3	1	AFG1-like	ATPase
NTPase_1	PF03266.10	gi|568163591|ref|YP_008946948.1|	-	0.0067	16.1	0.0	0.14	11.8	0.0	2.6	2	1	1	3	3	3	1	NTPase
Zeta_toxin	PF06414.7	gi|568163591|ref|YP_008946948.1|	-	0.0079	15.3	0.0	0.017	14.2	0.0	1.5	1	0	0	1	1	1	1	Zeta	toxin
Sigma54_activ_2	PF14532.1	gi|568163591|ref|YP_008946948.1|	-	0.01	15.8	0.0	0.022	14.8	0.0	1.6	1	0	0	1	1	1	0	Sigma-54	interaction	domain
AAA_23	PF13476.1	gi|568163591|ref|YP_008946948.1|	-	0.011	16.0	2.9	0.31	11.3	0.0	2.9	2	1	0	2	2	2	0	AAA	domain
Mg_chelatase	PF01078.16	gi|568163591|ref|YP_008946948.1|	-	0.013	14.7	0.0	0.02	14.0	0.0	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_29	PF13555.1	gi|568163591|ref|YP_008946948.1|	-	0.026	14.0	0.0	0.054	13.0	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_3	PF07726.6	gi|568163591|ref|YP_008946948.1|	-	0.033	13.7	0.0	0.11	12.1	0.0	1.9	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sigma54_activat	PF00158.21	gi|568163591|ref|YP_008946948.1|	-	0.034	13.6	0.0	0.1	12.0	0.0	1.8	1	1	0	1	1	1	0	Sigma-54	interaction	domain
DNA_pol3_delta2	PF13177.1	gi|568163591|ref|YP_008946948.1|	-	0.038	13.6	0.0	0.17	11.5	0.0	2.1	2	1	0	2	2	2	0	DNA	polymerase	III,	delta	subunit
MMR_HSR1	PF01926.18	gi|568163591|ref|YP_008946948.1|	-	0.061	13.2	0.1	0.24	11.3	0.0	2.2	2	1	0	2	2	2	0	50S	ribosome-binding	GTPase
AAA_10	PF12846.2	gi|568163591|ref|YP_008946948.1|	-	0.081	12.3	0.1	1.7	8.0	0.0	2.7	3	0	0	3	3	3	0	AAA-like	domain
SKI	PF01202.17	gi|568163591|ref|YP_008946948.1|	-	0.082	12.7	0.0	0.29	11.0	0.0	1.9	1	0	0	1	1	1	0	Shikimate	kinase
ArgK	PF03308.11	gi|568163591|ref|YP_008946948.1|	-	0.1	11.3	0.0	0.18	10.5	0.0	1.4	1	0	0	1	1	1	0	ArgK	protein
MobB	PF03205.9	gi|568163591|ref|YP_008946948.1|	-	0.12	12.1	0.0	0.27	10.9	0.0	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
SRP54	PF00448.17	gi|568163591|ref|YP_008946948.1|	-	0.13	11.7	0.0	0.3	10.5	0.0	1.6	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA_21	PF13304.1	gi|568163591|ref|YP_008946948.1|	-	0.22	11.4	0.1	0.22	11.4	0.1	2.9	4	1	1	5	5	4	0	AAA	domain
Rep_fac_C	PF08542.6	gi|568163592|ref|YP_008946949.1|	-	2.9e-24	84.8	0.1	9.2e-24	83.2	0.0	1.9	1	0	0	1	1	1	1	Replication	factor	C	C-terminal	domain
AAA	PF00004.24	gi|568163592|ref|YP_008946949.1|	-	1.8e-16	60.5	0.0	3.9e-16	59.4	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DNA_pol3_delta2	PF13177.1	gi|568163592|ref|YP_008946949.1|	-	4e-14	52.5	0.8	6.7e-12	45.3	0.1	2.5	2	1	0	2	2	1	1	DNA	polymerase	III,	delta	subunit
Rad17	PF03215.10	gi|568163592|ref|YP_008946949.1|	-	2.4e-09	36.4	0.1	5e-06	25.4	0.0	2.2	1	1	1	2	2	2	2	Rad17	cell	cycle	checkpoint	protein
RuvB_N	PF05496.7	gi|568163592|ref|YP_008946949.1|	-	1.7e-08	33.8	0.1	1.3e-07	30.9	0.0	2.1	2	1	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_14	PF13173.1	gi|568163592|ref|YP_008946949.1|	-	8.2e-08	32.2	0.3	1.9e-06	27.8	0.0	2.4	1	1	1	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|568163592|ref|YP_008946949.1|	-	3.2e-07	30.5	0.2	0.00013	22.1	0.1	2.9	2	1	0	2	2	1	1	AAA	domain
AAA_16	PF13191.1	gi|568163592|ref|YP_008946949.1|	-	1e-06	28.8	0.0	0.00057	19.9	0.0	2.4	1	1	1	2	2	2	1	AAA	ATPase	domain
AAA_3	PF07726.6	gi|568163592|ref|YP_008946949.1|	-	1.2e-05	24.9	0.0	2.1e-05	24.1	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
TIP49	PF06068.8	gi|568163592|ref|YP_008946949.1|	-	1.2e-05	24.1	0.0	0.00085	18.1	0.0	2.3	1	1	1	2	2	2	1	TIP49	C-terminus
AAA_18	PF13238.1	gi|568163592|ref|YP_008946949.1|	-	1.8e-05	25.0	0.2	0.00025	21.3	0.0	2.7	2	1	0	2	2	2	1	AAA	domain
AAA_19	PF13245.1	gi|568163592|ref|YP_008946949.1|	-	2.8e-05	23.7	0.0	6.7e-05	22.5	0.0	1.7	1	0	0	1	1	1	1	Part	of	AAA	domain
IstB_IS21	PF01695.12	gi|568163592|ref|YP_008946949.1|	-	3.9e-05	23.1	0.0	6.8e-05	22.3	0.0	1.3	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
DNA_pol3_delta	PF06144.8	gi|568163592|ref|YP_008946949.1|	-	9e-05	22.0	0.6	0.00026	20.5	0.1	1.9	3	0	0	3	3	1	1	DNA	polymerase	III,	delta	subunit
FtsK_SpoIIIE	PF01580.13	gi|568163592|ref|YP_008946949.1|	-	0.00015	21.3	0.0	0.0014	18.1	0.0	2.3	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
ResIII	PF04851.10	gi|568163592|ref|YP_008946949.1|	-	0.00023	21.0	0.0	0.0016	18.2	0.0	2.2	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
Sigma54_activ_2	PF14532.1	gi|568163592|ref|YP_008946949.1|	-	0.0004	20.4	0.0	0.0021	18.0	0.0	2.2	1	1	0	1	1	1	1	Sigma-54	interaction	domain
AAA_17	PF13207.1	gi|568163592|ref|YP_008946949.1|	-	0.00056	20.7	0.0	0.0018	19.1	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_11	PF13086.1	gi|568163592|ref|YP_008946949.1|	-	0.00067	19.2	0.0	0.0011	18.5	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|568163592|ref|YP_008946949.1|	-	0.00072	19.3	0.1	0.0015	18.3	0.1	1.5	1	1	0	1	1	1	1	Archaeal	ATPase
AAA_25	PF13481.1	gi|568163592|ref|YP_008946949.1|	-	0.001	18.5	0.6	0.0083	15.5	0.2	2.5	2	1	0	2	2	2	1	AAA	domain
Mg_chelatase	PF01078.16	gi|568163592|ref|YP_008946949.1|	-	0.0014	17.7	0.0	0.077	12.1	0.0	2.4	2	1	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_5	PF07728.9	gi|568163592|ref|YP_008946949.1|	-	0.0019	17.9	0.1	0.011	15.4	0.0	2.4	2	1	0	2	2	1	1	AAA	domain	(dynein-related	subfamily)
SNF2_N	PF00176.18	gi|568163592|ref|YP_008946949.1|	-	0.0023	16.7	0.0	0.45	9.2	0.0	2.1	1	1	1	2	2	2	1	SNF2	family	N-terminal	domain
AAA_30	PF13604.1	gi|568163592|ref|YP_008946949.1|	-	0.0029	17.1	0.0	0.019	14.5	0.0	2.3	2	2	0	2	2	2	1	AAA	domain
PhoH	PF02562.11	gi|568163592|ref|YP_008946949.1|	-	0.0031	16.7	0.0	0.3	10.2	0.0	2.4	2	0	0	2	2	2	1	PhoH-like	protein
DUF2075	PF09848.4	gi|568163592|ref|YP_008946949.1|	-	0.0035	16.3	0.1	0.019	13.9	0.1	1.9	1	1	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_10	PF12846.2	gi|568163592|ref|YP_008946949.1|	-	0.0039	16.6	0.1	0.081	12.3	0.1	2.5	1	1	0	1	1	1	1	AAA-like	domain
AAA_33	PF13671.1	gi|568163592|ref|YP_008946949.1|	-	0.0054	16.6	0.1	0.019	14.8	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
DUF815	PF05673.8	gi|568163592|ref|YP_008946949.1|	-	0.0064	15.4	0.0	0.011	14.6	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
T2SE	PF00437.15	gi|568163592|ref|YP_008946949.1|	-	0.0073	15.2	0.0	0.015	14.1	0.0	1.5	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
DEAD	PF00270.24	gi|568163592|ref|YP_008946949.1|	-	0.0079	15.7	0.4	3.4	7.1	0.0	2.7	2	2	1	3	3	3	0	DEAD/DEAH	box	helicase
Viral_helicase1	PF01443.13	gi|568163592|ref|YP_008946949.1|	-	0.012	15.1	0.0	0.02	14.4	0.0	1.3	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
KTI12	PF08433.5	gi|568163592|ref|YP_008946949.1|	-	0.013	14.7	0.0	0.035	13.3	0.0	1.8	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
Phage_T4_Ndd	PF06591.6	gi|568163592|ref|YP_008946949.1|	-	0.013	15.0	0.1	0.053	13.0	0.0	1.8	1	1	1	2	2	2	0	T4-like	phage	nuclear	disruption	protein	(Ndd)
Sigma54_activat	PF00158.21	gi|568163592|ref|YP_008946949.1|	-	0.015	14.7	0.0	0.47	9.9	0.0	2.2	2	0	0	2	2	2	0	Sigma-54	interaction	domain
Zeta_toxin	PF06414.7	gi|568163592|ref|YP_008946949.1|	-	0.016	14.3	0.0	0.036	13.1	0.0	1.7	1	0	0	1	1	1	0	Zeta	toxin
AAA_28	PF13521.1	gi|568163592|ref|YP_008946949.1|	-	0.026	14.5	0.0	0.055	13.4	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.17	gi|568163592|ref|YP_008946949.1|	-	0.026	14.6	0.0	0.1	12.7	0.0	2.1	1	1	0	1	1	1	0	RNA	helicase
AAA_24	PF13479.1	gi|568163592|ref|YP_008946949.1|	-	0.029	13.9	0.0	0.081	12.4	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
MobB	PF03205.9	gi|568163592|ref|YP_008946949.1|	-	0.038	13.7	0.0	0.22	11.2	0.0	2.2	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
SseB_C	PF14581.1	gi|568163592|ref|YP_008946949.1|	-	0.038	13.8	0.1	0.2	11.5	0.0	2.2	2	0	0	2	2	2	0	SseB	protein	C-terminal	domain
DNA_pol3_gamma3	PF12169.3	gi|568163592|ref|YP_008946949.1|	-	0.06	13.0	0.6	2.1	8.0	0.0	3.2	4	0	0	4	4	3	0	DNA	polymerase	III	subunits	gamma	and	tau	domain	III
NTPase_1	PF03266.10	gi|568163592|ref|YP_008946949.1|	-	0.081	12.6	0.1	1.3	8.7	0.0	2.5	1	1	1	2	2	2	0	NTPase
GSH_synthase	PF03199.10	gi|568163592|ref|YP_008946949.1|	-	0.11	12.5	0.0	0.23	11.5	0.0	1.6	1	0	0	1	1	1	0	Eukaryotic	glutathione	synthase
AAA_29	PF13555.1	gi|568163592|ref|YP_008946949.1|	-	0.12	11.9	0.0	0.29	10.7	0.0	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
PBP	PF01161.15	gi|568163593|ref|YP_008946950.1|	-	4e-40	137.0	0.0	4.6e-40	136.8	0.0	1.0	1	0	0	1	1	1	1	Phosphatidylethanolamine-binding	protein
Proteasome	PF00227.21	gi|568163594|ref|YP_008946951.1|	-	9.7e-52	175.0	0.3	1.1e-51	174.8	0.2	1.0	1	0	0	1	1	1	1	Proteasome	subunit
Amidase	PF01425.16	gi|568163595|ref|YP_008946952.1|	-	1.4e-93	314.1	0.0	2.3e-93	313.4	0.0	1.2	1	1	0	1	1	1	1	Amidase
ADH_N	PF08240.7	gi|568163596|ref|YP_008946953.1|	-	4e-28	97.3	0.1	8.4e-28	96.3	0.1	1.5	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|568163596|ref|YP_008946953.1|	-	1.3e-18	66.7	0.1	2e-18	66.1	0.1	1.3	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|568163596|ref|YP_008946953.1|	-	2.8e-07	31.4	0.0	5.5e-07	30.5	0.0	1.5	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
Eno-Rase_NADH_b	PF12242.3	gi|568163596|ref|YP_008946953.1|	-	0.00049	19.8	0.9	0.0012	18.6	0.6	1.6	1	0	0	1	1	1	1	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
CPSase_L_chain	PF00289.17	gi|568163596|ref|YP_008946953.1|	-	0.0075	16.3	0.0	0.043	13.9	0.0	2.1	3	0	0	3	3	3	1	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
E1-N	PF14463.1	gi|568163596|ref|YP_008946953.1|	-	0.018	14.6	0.1	0.039	13.5	0.1	1.5	1	0	0	1	1	1	0	E1	N-terminal	domain
AlaDh_PNT_C	PF01262.16	gi|568163596|ref|YP_008946953.1|	-	0.033	13.7	0.4	0.072	12.6	0.3	1.5	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
Ribosomal_L17	PF01196.14	gi|568163596|ref|YP_008946953.1|	-	0.12	12.9	0.0	0.44	11.1	0.0	1.9	2	0	0	2	2	2	0	Ribosomal	protein	L17
Rep_fac_C	PF08542.6	gi|568164794|ref|YP_008946955.1|	-	0.056	13.4	0.4	6	6.9	0.0	2.6	2	0	0	2	2	2	0	Replication	factor	C	C-terminal	domain
Bacillus_HBL	PF05791.6	gi|568164794|ref|YP_008946955.1|	-	0.076	12.3	0.1	0.11	11.7	0.1	1.3	1	0	0	1	1	1	0	Bacillus	haemolytic	enterotoxin	(HBL)
DUF2730	PF10805.3	gi|568164794|ref|YP_008946955.1|	-	0.094	12.4	0.0	0.17	11.6	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2730)
Malic_M	PF03949.10	gi|568164794|ref|YP_008946955.1|	-	0.11	12.0	0.0	0.13	11.7	0.0	1.1	1	0	0	1	1	1	0	Malic	enzyme,	NAD	binding	domain
TP_methylase	PF00590.15	gi|568163598|ref|YP_008946956.1|	-	3.3e-46	157.6	0.2	3.9e-46	157.4	0.1	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
YHS	PF04945.8	gi|568163599|ref|YP_008946957.1|	-	2.3e-20	72.1	2.1	2.5e-20	72.0	1.5	1.0	1	0	0	1	1	1	1	YHS	domain
Arc_trans_TRASH	PF08394.5	gi|568163599|ref|YP_008946957.1|	-	9.2e-06	25.7	2.0	1.2e-05	25.3	1.4	1.2	1	0	0	1	1	1	1	Archaeal	TRASH	domain
zf-FCS	PF06467.9	gi|568163599|ref|YP_008946957.1|	-	0.00012	21.6	0.9	0.00015	21.3	0.7	1.2	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
DUF2116	PF09889.4	gi|568163599|ref|YP_008946957.1|	-	0.047	13.5	0.2	0.2	11.4	0.1	1.8	2	0	0	2	2	2	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
RPAP2_Rtr1	PF04181.8	gi|568163599|ref|YP_008946957.1|	-	0.11	12.6	0.2	0.13	12.3	0.2	1.2	1	0	0	1	1	1	0	Rtr1/RPAP2	family
FAD_binding_5	PF00941.16	gi|568163600|ref|YP_008946958.1|	-	8.6e-49	165.2	0.0	1.2e-48	164.8	0.0	1.2	1	0	0	1	1	1	1	FAD	binding	domain	in	molybdopterin	dehydrogenase
CO_deh_flav_C	PF03450.12	gi|568163600|ref|YP_008946958.1|	-	1.7e-28	98.5	0.4	2.6e-28	97.9	0.3	1.3	1	0	0	1	1	1	1	CO	dehydrogenase	flavoprotein	C-terminal	domain
Fer2_2	PF01799.15	gi|568163601|ref|YP_008946959.1|	-	4e-36	122.7	0.4	1.9e-35	120.5	0.0	2.0	2	0	0	2	2	2	1	[2Fe-2S]	binding	domain
Fer2	PF00111.22	gi|568163601|ref|YP_008946959.1|	-	3.1e-07	30.0	1.0	3.1e-07	30.0	0.7	1.9	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer2_3	PF13085.1	gi|568163601|ref|YP_008946959.1|	-	0.00037	20.3	0.1	0.00069	19.4	0.1	1.5	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer2_4	PF13510.1	gi|568163601|ref|YP_008946959.1|	-	0.12	12.2	2.1	1	9.2	1.5	2.3	1	1	0	1	1	1	0	2Fe-2S	iron-sulfur	cluster	binding	domain
NTP_transf_3	PF12804.2	gi|568163602|ref|YP_008946960.1|	-	4.2e-34	117.9	0.0	5.4e-34	117.5	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.14	gi|568163602|ref|YP_008946960.1|	-	2.2e-07	30.6	0.0	3.7e-07	29.8	0.0	1.3	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
CofC	PF01983.11	gi|568163602|ref|YP_008946960.1|	-	0.0001	21.3	0.2	0.00015	20.7	0.2	1.3	1	1	0	1	1	1	1	Guanylyl	transferase	CofC	like
COXG	PF06240.8	gi|568163603|ref|YP_008946961.1|	-	2.7e-39	134.0	0.0	3e-39	133.8	0.0	1.0	1	0	0	1	1	1	1	Carbon	monoxide	dehydrogenase	subunit	G	(CoxG)
Polyketide_cyc	PF03364.15	gi|568163603|ref|YP_008946961.1|	-	7.3e-06	25.9	0.0	1.2e-05	25.3	0.0	1.4	1	1	0	1	1	1	1	Polyketide	cyclase	/	dehydrase	and	lipid	transport
Polyketide_cyc2	PF10604.4	gi|568163603|ref|YP_008946961.1|	-	0.019	15.1	0.0	0.02	15.0	0.0	1.3	1	1	0	1	1	1	0	Polyketide	cyclase	/	dehydrase	and	lipid	transport
TCO89	PF10452.4	gi|568163603|ref|YP_008946961.1|	-	0.15	10.9	0.0	0.18	10.6	0.0	1.0	1	0	0	1	1	1	0	TORC1	subunit	TCO89
GTP_EFTU	PF00009.22	gi|568163604|ref|YP_008946962.1|	-	5.4e-25	87.9	0.1	9.3e-25	87.1	0.0	1.3	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D3	PF03143.12	gi|568163604|ref|YP_008946962.1|	-	6.3e-16	58.3	0.0	1.4e-15	57.2	0.0	1.6	1	0	0	1	1	1	1	Elongation	factor	Tu	C-terminal	domain
PduV-EutP	PF10662.4	gi|568163604|ref|YP_008946962.1|	-	1.8e-05	24.2	0.7	1.3	8.5	0.0	3.5	2	1	1	3	3	3	3	Ethanolamine	utilisation	-	propanediol	utilisation
MMR_HSR1	PF01926.18	gi|568163604|ref|YP_008946962.1|	-	8.1e-05	22.5	0.6	0.00026	20.8	0.3	2.0	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
GTP_EFTU_D2	PF03144.20	gi|568163604|ref|YP_008946962.1|	-	0.0013	18.7	0.8	0.0053	16.8	0.6	2.2	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
AAA_4	PF04326.9	gi|568163604|ref|YP_008946962.1|	-	0.96	9.6	8.0	0.54	10.4	1.2	3.1	3	2	0	3	3	3	0	Divergent	AAA	domain
zf-ZPR1	PF03367.8	gi|568163605|ref|YP_008946963.1|	-	2.9e-25	88.2	0.1	1.6e-23	82.6	0.0	2.0	1	1	0	1	1	1	1	ZPR1	zinc-finger	domain
Lar_restr_allev	PF14354.1	gi|568163605|ref|YP_008946963.1|	-	0.0005	20.3	0.0	0.00098	19.3	0.0	1.5	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
Zn_Tnp_IS1595	PF12760.2	gi|568163605|ref|YP_008946963.1|	-	0.06	13.1	0.1	0.13	12.0	0.1	1.6	1	1	0	1	1	1	0	Transposase	zinc-ribbon	domain
TFIIS_C	PF01096.13	gi|568163605|ref|YP_008946963.1|	-	0.22	11.1	0.8	21	4.8	0.0	2.3	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
HSP20	PF00011.16	gi|568163606|ref|YP_008946964.1|	-	9.1e-11	41.5	1.4	2.8e-09	36.7	1.0	2.2	1	1	0	1	1	1	1	Hsp20/alpha	crystallin	family
CS	PF04969.11	gi|568163606|ref|YP_008946964.1|	-	0.00049	20.5	0.4	0.00082	19.8	0.3	1.3	1	0	0	1	1	1	1	CS	domain
GvpH	PF05455.6	gi|568163606|ref|YP_008946964.1|	-	0.043	13.4	0.0	0.049	13.2	0.0	1.3	1	0	0	1	1	1	0	GvpH
Glyoxalase_4	PF13669.1	gi|568163607|ref|YP_008946965.1|	-	7.9e-22	77.3	0.0	9.4e-22	77.0	0.0	1.1	1	0	0	1	1	1	1	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase_3	PF13468.1	gi|568163607|ref|YP_008946965.1|	-	2.1e-10	40.7	0.0	2.7e-10	40.4	0.0	1.2	1	0	0	1	1	1	1	Glyoxalase-like	domain
Glyoxalase	PF00903.20	gi|568163607|ref|YP_008946965.1|	-	3e-09	36.9	0.1	1.1e-08	35.1	0.0	1.8	1	1	0	1	1	1	1	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase_2	PF12681.2	gi|568163607|ref|YP_008946965.1|	-	2.9e-07	31.0	0.0	3.3e-07	30.8	0.0	1.1	1	0	0	1	1	1	1	Glyoxalase-like	domain
Glyoxalase_5	PF14696.1	gi|568163607|ref|YP_008946965.1|	-	0.097	12.5	0.0	0.16	11.8	0.0	1.4	1	1	0	1	1	1	0	Hydroxyphenylpyruvate	dioxygenase,	HPPD,	N-terminal
MM_CoA_mutase	PF01642.17	gi|568163608|ref|YP_008946966.1|	-	1.8e-186	620.2	0.0	2.1e-186	620.1	0.0	1.0	1	0	0	1	1	1	1	Methylmalonyl-CoA	mutase
RE_AccI	PF09545.5	gi|568163608|ref|YP_008946966.1|	-	0.065	11.7	0.0	0.1	11.1	0.0	1.4	1	0	0	1	1	1	0	AccI	restriction	endonuclease
Pribosyltran	PF00156.22	gi|568163609|ref|YP_008946967.1|	-	5e-20	71.4	0.2	6.9e-20	71.0	0.1	1.2	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
Phosphodiest	PF01663.17	gi|568163610|ref|YP_008946968.1|	-	1.9e-19	70.2	5.9	2e-18	66.8	4.1	2.0	1	1	0	1	1	1	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
Metalloenzyme	PF01676.13	gi|568163610|ref|YP_008946968.1|	-	1.8e-06	27.5	0.9	3.5e-06	26.5	0.2	1.8	2	0	0	2	2	2	1	Metalloenzyme	superfamily
PglZ	PF08665.7	gi|568163610|ref|YP_008946968.1|	-	4.7e-06	26.3	2.0	1.3e-05	24.9	0.1	2.2	2	0	0	2	2	2	1	PglZ	domain
DAO	PF01266.19	gi|568163611|ref|YP_008946970.1|	-	1.2e-17	63.8	0.0	2.3e-09	36.6	0.0	2.4	2	1	0	2	2	2	2	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|568163611|ref|YP_008946970.1|	-	2.5e-12	46.6	0.7	6.7e-12	45.2	0.2	1.9	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.12	gi|568163611|ref|YP_008946970.1|	-	2.4e-09	36.6	2.6	1.5e-07	30.7	0.4	2.3	2	0	0	2	2	2	2	Thi4	family
Pyr_redox	PF00070.22	gi|568163611|ref|YP_008946970.1|	-	3e-09	37.1	1.0	4.2e-05	23.8	0.2	3.0	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Amino_oxidase	PF01593.19	gi|568163611|ref|YP_008946970.1|	-	8.5e-09	34.9	0.0	0.004	16.2	0.0	3.2	3	0	0	3	3	3	3	Flavin	containing	amine	oxidoreductase
FAD_binding_2	PF00890.19	gi|568163611|ref|YP_008946970.1|	-	2.4e-07	29.9	3.0	0.00033	19.6	0.9	2.6	3	0	0	3	3	3	2	FAD	binding	domain
Pyr_redox_2	PF07992.9	gi|568163611|ref|YP_008946970.1|	-	1.6e-06	28.1	0.1	1e-05	25.4	0.0	2.1	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|568163611|ref|YP_008946970.1|	-	6.2e-06	25.4	0.3	1.1e-05	24.7	0.2	1.3	1	0	0	1	1	1	1	FAD	binding	domain
HI0933_like	PF03486.9	gi|568163611|ref|YP_008946970.1|	-	1.1e-05	24.1	0.4	0.00074	18.1	0.2	2.2	2	0	0	2	2	2	1	HI0933-like	protein
FAD_oxidored	PF12831.2	gi|568163611|ref|YP_008946970.1|	-	2.9e-05	23.3	0.2	5.8e-05	22.3	0.0	1.5	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
GDI	PF00996.13	gi|568163611|ref|YP_008946970.1|	-	0.002	16.5	0.2	0.24	9.6	0.0	2.2	2	0	0	2	2	2	2	GDP	dissociation	inhibitor
Trp_halogenase	PF04820.9	gi|568163611|ref|YP_008946970.1|	-	0.0032	16.1	1.1	0.016	13.8	0.2	2.1	2	0	0	2	2	2	1	Tryptophan	halogenase
Lycopene_cycl	PF05834.7	gi|568163611|ref|YP_008946970.1|	-	0.0033	16.4	0.3	0.063	12.1	0.1	2.2	2	0	0	2	2	2	1	Lycopene	cyclase	protein
GIDA	PF01134.17	gi|568163611|ref|YP_008946970.1|	-	0.0048	15.8	0.8	0.0048	15.8	0.6	2.6	2	1	1	3	3	3	1	Glucose	inhibited	division	protein	A
Pyr_redox_3	PF13738.1	gi|568163611|ref|YP_008946970.1|	-	0.057	13.4	0.2	0.12	12.4	0.1	1.5	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
YjeF_N	PF03853.10	gi|568163611|ref|YP_008946970.1|	-	0.15	11.6	0.2	5.8	6.4	0.1	3.0	3	0	0	3	3	3	0	YjeF-related	protein	N-terminus
XdhC_C	PF13478.1	gi|568163611|ref|YP_008946970.1|	-	0.17	12.1	0.0	1.8	8.9	0.0	2.2	2	0	0	2	2	2	0	XdhC	Rossmann	domain
3HCDH_N	PF02737.13	gi|568163611|ref|YP_008946970.1|	-	0.42	10.2	2.2	2.5	7.7	0.2	2.4	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
AAA	PF00004.24	gi|568163612|ref|YP_008946971.1|	-	4.6e-84	279.2	0.0	6.5e-41	139.6	0.0	2.5	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_17	PF13207.1	gi|568163612|ref|YP_008946971.1|	-	2.5e-17	63.8	0.8	3.1e-07	31.2	0.0	3.8	3	2	0	3	3	2	2	AAA	domain
AAA_2	PF07724.9	gi|568163612|ref|YP_008946971.1|	-	7.8e-17	61.7	0.0	5.9e-09	36.0	0.0	3.0	3	0	0	3	3	2	2	AAA	domain	(Cdc48	subfamily)
AAA_14	PF13173.1	gi|568163612|ref|YP_008946971.1|	-	1e-15	57.7	0.0	1.9e-07	31.0	0.0	2.9	3	0	0	3	3	2	2	AAA	domain
AAA_22	PF13401.1	gi|568163612|ref|YP_008946971.1|	-	5.4e-13	49.2	1.3	0.00011	22.3	0.0	4.8	2	2	0	2	2	2	2	AAA	domain
AAA_5	PF07728.9	gi|568163612|ref|YP_008946971.1|	-	1.2e-12	47.7	0.7	3.1e-05	23.7	0.4	4.0	2	2	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
RuvB_N	PF05496.7	gi|568163612|ref|YP_008946971.1|	-	1.3e-11	44.0	0.0	1.3e-05	24.3	0.0	2.6	2	1	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_16	PF13191.1	gi|568163612|ref|YP_008946971.1|	-	2.2e-10	40.8	0.2	0.0023	17.9	0.0	3.9	3	2	1	4	4	3	2	AAA	ATPase	domain
AAA_33	PF13671.1	gi|568163612|ref|YP_008946971.1|	-	3.3e-10	40.0	0.0	0.00019	21.3	0.0	2.8	2	0	0	2	2	2	2	AAA	domain
AAA_18	PF13238.1	gi|568163612|ref|YP_008946971.1|	-	3.6e-10	40.2	0.0	0.00019	21.7	0.0	3.0	2	0	0	2	2	2	2	AAA	domain
TIP49	PF06068.8	gi|568163612|ref|YP_008946971.1|	-	1.2e-09	37.4	0.0	2.7e-05	23.0	0.0	2.5	2	0	0	2	2	2	2	TIP49	C-terminus
RNA_helicase	PF00910.17	gi|568163612|ref|YP_008946971.1|	-	6.5e-09	35.9	0.0	0.0033	17.5	0.0	3.1	2	1	0	2	2	2	2	RNA	helicase
IstB_IS21	PF01695.12	gi|568163612|ref|YP_008946971.1|	-	2.9e-08	33.3	0.0	0.008	15.6	0.0	2.5	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
AAA_3	PF07726.6	gi|568163612|ref|YP_008946971.1|	-	8.5e-08	31.8	0.1	0.0012	18.4	0.2	2.8	2	1	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
NACHT	PF05729.7	gi|568163612|ref|YP_008946971.1|	-	2.1e-07	30.7	0.5	0.13	11.8	0.1	3.8	2	2	2	4	4	4	2	NACHT	domain
Zeta_toxin	PF06414.7	gi|568163612|ref|YP_008946971.1|	-	3.5e-07	29.5	0.3	0.0065	15.5	0.0	3.0	4	0	0	4	4	2	2	Zeta	toxin
AAA_28	PF13521.1	gi|568163612|ref|YP_008946971.1|	-	3.6e-07	30.2	0.0	0.037	13.9	0.0	2.7	2	0	0	2	2	2	2	AAA	domain
AAA_25	PF13481.1	gi|568163612|ref|YP_008946971.1|	-	4.4e-07	29.4	1.7	0.31	10.4	0.1	3.5	2	1	1	3	3	3	2	AAA	domain
Rad17	PF03215.10	gi|568163612|ref|YP_008946971.1|	-	1.4e-06	27.3	0.0	0.035	12.8	0.0	2.6	2	0	0	2	2	2	2	Rad17	cell	cycle	checkpoint	protein
ResIII	PF04851.10	gi|568163612|ref|YP_008946971.1|	-	2.2e-06	27.6	0.1	0.039	13.7	0.0	2.9	2	2	1	3	3	2	2	Type	III	restriction	enzyme,	res	subunit
Mg_chelatase	PF01078.16	gi|568163612|ref|YP_008946971.1|	-	2.6e-06	26.7	3.1	0.0067	15.6	0.2	2.4	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
Arch_ATPase	PF01637.13	gi|568163612|ref|YP_008946971.1|	-	1.9e-05	24.4	2.3	0.033	13.8	0.0	4.1	2	2	3	5	5	5	1	Archaeal	ATPase
Vps4_C	PF09336.5	gi|568163612|ref|YP_008946971.1|	-	2.2e-05	24.2	0.4	0.0033	17.2	0.0	3.2	3	0	0	3	3	2	1	Vps4	C	terminal	oligomerisation	domain
UPF0079	PF02367.12	gi|568163612|ref|YP_008946971.1|	-	4.6e-05	23.0	0.1	0.086	12.4	0.0	2.5	2	0	0	2	2	2	2	Uncharacterised	P-loop	hydrolase	UPF0079
Viral_helicase1	PF01443.13	gi|568163612|ref|YP_008946971.1|	-	6.5e-05	22.5	0.0	0.14	11.6	0.0	2.4	2	0	0	2	2	2	2	Viral	(Superfamily	1)	RNA	helicase
AAA_19	PF13245.1	gi|568163612|ref|YP_008946971.1|	-	9.9e-05	22.0	0.1	0.49	10.1	0.0	2.7	2	0	0	2	2	2	2	Part	of	AAA	domain
AFG1_ATPase	PF03969.11	gi|568163612|ref|YP_008946971.1|	-	0.0001	21.2	0.1	0.46	9.2	0.0	2.5	2	1	0	2	2	2	2	AFG1-like	ATPase
AAA_24	PF13479.1	gi|568163612|ref|YP_008946971.1|	-	0.00012	21.7	2.6	0.057	12.9	0.4	3.1	3	0	0	3	3	3	1	AAA	domain
NB-ARC	PF00931.17	gi|568163612|ref|YP_008946971.1|	-	0.00013	20.9	0.8	0.76	8.5	0.0	3.3	2	1	1	3	3	3	1	NB-ARC	domain
Sigma54_activat	PF00158.21	gi|568163612|ref|YP_008946971.1|	-	0.00013	21.5	0.1	0.94	8.9	0.0	3.4	2	2	0	2	2	2	2	Sigma-54	interaction	domain
ABC_tran	PF00005.22	gi|568163612|ref|YP_008946971.1|	-	0.00013	22.2	0.1	0.32	11.2	0.0	2.9	2	1	0	2	2	2	1	ABC	transporter
KaiC	PF06745.8	gi|568163612|ref|YP_008946971.1|	-	0.00025	20.2	0.4	1.4	7.9	0.0	3.3	2	1	0	2	2	2	2	KaiC
Sigma54_activ_2	PF14532.1	gi|568163612|ref|YP_008946971.1|	-	0.00027	21.0	0.0	1.2	9.1	0.0	2.7	2	0	0	2	2	2	2	Sigma-54	interaction	domain
DUF815	PF05673.8	gi|568163612|ref|YP_008946971.1|	-	0.00027	19.9	0.0	0.53	9.1	0.0	2.7	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
KTI12	PF08433.5	gi|568163612|ref|YP_008946971.1|	-	0.00035	19.8	0.3	0.74	8.9	0.0	3.9	4	0	0	4	4	4	1	Chromatin	associated	protein	KTI12
MMR_HSR1	PF01926.18	gi|568163612|ref|YP_008946971.1|	-	0.00037	20.4	0.6	0.2	11.6	0.0	3.9	4	1	0	4	4	3	1	50S	ribosome-binding	GTPase
SKI	PF01202.17	gi|568163612|ref|YP_008946971.1|	-	0.00057	19.7	0.8	0.32	10.8	0.5	3.0	2	1	1	3	3	3	1	Shikimate	kinase
ATP-synt_ab	PF00006.20	gi|568163612|ref|YP_008946971.1|	-	0.00082	18.9	0.0	0.67	9.4	0.0	2.4	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
Guanylate_kin	PF00625.16	gi|568163612|ref|YP_008946971.1|	-	0.00094	18.6	0.1	1.2	8.5	0.0	3.4	2	1	1	3	3	3	1	Guanylate	kinase
AAA_30	PF13604.1	gi|568163612|ref|YP_008946971.1|	-	0.0013	18.3	0.1	2.2	7.8	0.0	3.0	2	1	0	3	3	3	1	AAA	domain
Bac_DnaA	PF00308.13	gi|568163612|ref|YP_008946971.1|	-	0.0024	17.5	0.5	1.8	8.1	0.0	3.2	3	1	0	3	3	3	1	Bacterial	dnaA	protein
MFS_Mycoplasma	PF07672.8	gi|568163612|ref|YP_008946971.1|	-	0.0057	15.8	0.7	0.009	15.2	0.5	1.2	1	0	0	1	1	1	1	Mycoplasma	MFS	transporter
AAA_11	PF13086.1	gi|568163612|ref|YP_008946971.1|	-	0.0076	15.8	0.0	3.5	7.1	0.0	2.6	2	0	0	2	2	2	0	AAA	domain
NTPase_1	PF03266.10	gi|568163612|ref|YP_008946971.1|	-	0.0081	15.8	0.1	1.5	8.5	0.1	3.0	2	1	1	3	3	3	1	NTPase
DAP3	PF10236.4	gi|568163612|ref|YP_008946971.1|	-	0.018	13.9	0.0	3	6.6	0.0	2.3	2	0	0	2	2	2	0	Mitochondrial	ribosomal	death-associated	protein	3
Parvo_NS1	PF01057.12	gi|568163612|ref|YP_008946971.1|	-	0.02	13.7	0.0	3.9	6.2	0.0	2.4	2	0	0	2	2	2	0	Parvovirus	non-structural	protein	NS1
SRPRB	PF09439.5	gi|568163612|ref|YP_008946971.1|	-	0.031	13.4	0.1	3.6	6.7	0.0	3.3	3	0	0	3	3	3	0	Signal	recognition	particle	receptor	beta	subunit
Glutaredoxin	PF00462.19	gi|568163612|ref|YP_008946971.1|	-	0.038	13.9	0.0	0.14	12.1	0.0	2.0	1	0	0	1	1	1	0	Glutaredoxin
PhoH	PF02562.11	gi|568163612|ref|YP_008946971.1|	-	0.04	13.1	0.1	11	5.1	0.0	2.9	3	0	0	3	3	2	0	PhoH-like	protein
T2SE	PF00437.15	gi|568163612|ref|YP_008946971.1|	-	0.044	12.6	0.0	4.1	6.2	0.0	2.4	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
PduV-EutP	PF10662.4	gi|568163612|ref|YP_008946971.1|	-	0.049	13.1	0.1	1.7	8.0	0.0	2.4	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
CPT	PF07931.7	gi|568163612|ref|YP_008946971.1|	-	0.051	13.1	0.0	3.6	7.1	0.0	2.4	2	0	0	2	2	2	0	Chloramphenicol	phosphotransferase-like	protein
DUF258	PF03193.11	gi|568163612|ref|YP_008946971.1|	-	0.082	12.0	0.0	9.7	5.3	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF258
cobW	PF02492.14	gi|568163612|ref|YP_008946971.1|	-	0.09	12.2	0.4	4.9	6.5	0.0	2.6	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
PPV_E1_C	PF00519.12	gi|568163612|ref|YP_008946971.1|	-	0.092	11.3	0.5	6.3	5.2	0.0	2.1	2	0	0	2	2	2	0	Papillomavirus	helicase
AAA_10	PF12846.2	gi|568163612|ref|YP_008946971.1|	-	0.096	12.1	5.5	2.7	7.3	0.4	3.9	2	2	0	3	3	3	0	AAA-like	domain
GlutR_N	PF05201.10	gi|568163612|ref|YP_008946971.1|	-	0.1	12.1	0.0	0.25	10.9	0.0	1.6	1	0	0	1	1	1	0	Glutamyl-tRNAGlu	reductase,	N-terminal	domain
Inositol_P	PF00459.20	gi|568163613|ref|YP_008946972.1|	-	3.6e-22	78.9	0.0	4.8e-22	78.5	0.0	1.1	1	0	0	1	1	1	1	Inositol	monophosphatase	family
FBPase	PF00316.15	gi|568163613|ref|YP_008946972.1|	-	0.00012	21.0	0.2	0.00016	20.5	0.1	1.2	1	0	0	1	1	1	1	Fructose-1-6-bisphosphatase
Pyr_redox_2	PF07992.9	gi|568163614|ref|YP_008946973.1|	-	3e-33	115.4	0.9	4.2e-33	114.9	0.6	1.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|568163614|ref|YP_008946973.1|	-	2.6e-15	57.0	0.0	2.8e-14	53.6	0.0	2.1	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|568163614|ref|YP_008946973.1|	-	7.1e-14	51.9	3.2	1e-13	51.4	0.3	2.5	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|568163614|ref|YP_008946973.1|	-	6.2e-06	24.9	0.1	0.021	13.3	0.0	3.3	3	0	0	3	3	3	1	HI0933-like	protein
K_oxygenase	PF13434.1	gi|568163614|ref|YP_008946973.1|	-	2.6e-05	23.3	0.0	0.13	11.1	0.0	3.1	2	1	1	3	3	3	1	L-lysine	6-monooxygenase	(NADPH-requiring)
GIDA	PF01134.17	gi|568163614|ref|YP_008946973.1|	-	4.3e-05	22.5	10.2	0.038	12.8	0.7	4.4	2	2	3	5	5	5	2	Glucose	inhibited	division	protein	A
FAD_oxidored	PF12831.2	gi|568163614|ref|YP_008946973.1|	-	5.6e-05	22.4	0.5	0.052	12.6	0.0	2.6	3	0	0	3	3	3	2	FAD	dependent	oxidoreductase
DAO	PF01266.19	gi|568163614|ref|YP_008946973.1|	-	0.00051	19.0	0.8	0.015	14.2	0.0	2.6	2	1	0	2	2	2	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|568163614|ref|YP_008946973.1|	-	0.00056	18.8	2.3	0.65	8.7	0.0	3.0	2	1	2	4	4	4	2	FAD	binding	domain
NAD_binding_7	PF13241.1	gi|568163614|ref|YP_008946973.1|	-	0.0013	18.9	0.8	0.02	15.1	0.1	2.5	2	1	0	2	2	2	1	Putative	NAD(P)-binding
Thi4	PF01946.12	gi|568163614|ref|YP_008946973.1|	-	0.0024	17.0	0.0	0.89	8.6	0.0	2.4	2	0	0	2	2	2	2	Thi4	family
Mqo	PF06039.10	gi|568163614|ref|YP_008946973.1|	-	0.044	11.9	0.0	0.064	11.4	0.0	1.2	1	0	0	1	1	1	0	Malate:quinone	oxidoreductase	(Mqo)
NAD_binding_9	PF13454.1	gi|568163614|ref|YP_008946973.1|	-	0.051	13.3	0.1	2.4	7.9	0.0	2.9	3	0	0	3	3	3	0	FAD-NAD(P)-binding
Shikimate_DH	PF01488.15	gi|568163614|ref|YP_008946973.1|	-	0.073	13.1	1.0	0.17	11.9	0.0	2.0	3	0	0	3	3	3	0	Shikimate	/	quinate	5-dehydrogenase
DUF4346	PF14251.1	gi|568163615|ref|YP_008946974.1|	-	1.1e-06	28.4	0.4	1e-05	25.2	0.1	2.4	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF4346)
Baculo_p26	PF04766.7	gi|568163615|ref|YP_008946974.1|	-	0.029	13.6	0.0	0.058	12.6	0.0	1.4	1	0	0	1	1	1	0	Nucleopolyhedrovirus	p26	protein
PTPS	PF01242.14	gi|568163616|ref|YP_008946976.1|	-	7.2e-23	80.5	0.0	8e-23	80.4	0.0	1.0	1	0	0	1	1	1	1	6-pyruvoyl	tetrahydropterin	synthase
SLIDE	PF09111.5	gi|568163617|ref|YP_008946977.1|	-	0.012	15.3	1.0	1.5	8.5	0.0	2.3	2	0	0	2	2	2	0	SLIDE
FlgN	PF05130.7	gi|568163617|ref|YP_008946977.1|	-	0.028	14.6	0.2	0.053	13.7	0.1	1.5	1	1	0	1	1	1	0	FlgN	protein
Syntaxin-6_N	PF09177.6	gi|568163617|ref|YP_008946977.1|	-	0.047	14.0	0.9	0.16	12.3	0.2	2.0	1	1	1	2	2	2	0	Syntaxin	6,	N-terminal
EF-hand_2	PF09068.6	gi|568163617|ref|YP_008946977.1|	-	0.12	12.4	0.7	0.38	10.8	0.1	1.8	1	1	1	2	2	2	0	EF	hand
PPP5	PF08321.7	gi|568163617|ref|YP_008946977.1|	-	0.17	11.9	2.3	0.46	10.5	0.5	2.1	1	1	1	2	2	2	0	PPP5	TPR	repeat	region
FliG_N	PF14842.1	gi|568164797|ref|YP_008946978.1|	-	0.098	12.7	0.1	14	5.7	0.0	2.2	2	0	0	2	2	2	0	FliG	N-terminal	domain
HEPN	PF05168.9	gi|568163618|ref|YP_008946979.1|	-	0.032	14.1	1.4	0.066	13.1	1.0	1.6	1	1	0	1	1	1	0	HEPN	domain
DNA_pol3_a_NII	PF11490.3	gi|568163619|ref|YP_008946980.1|	-	0.038	13.6	0.1	0.042	13.4	0.1	1.1	1	0	0	1	1	1	0	DNA	polymerase	III	polC-type	N-terminus	II
MAF_flag10	PF01973.13	gi|568163620|ref|YP_008946981.1|	-	6e-30	103.9	0.1	8.2e-30	103.5	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF115
TPK_catalytic	PF04263.11	gi|568163620|ref|YP_008946981.1|	-	0.0073	15.8	0.1	0.027	14.0	0.0	1.9	2	0	0	2	2	2	1	Thiamin	pyrophosphokinase,	catalytic	domain
HMGL-like	PF00682.14	gi|568163621|ref|YP_008946982.1|	-	6.2e-81	271.5	0.3	8.9e-81	271.0	0.2	1.2	1	0	0	1	1	1	1	HMGL-like
Lactamase_B_3	PF13483.1	gi|568163622|ref|YP_008946983.1|	-	1.8e-33	115.5	0.1	2.3e-33	115.2	0.1	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.2	gi|568163622|ref|YP_008946983.1|	-	6.7e-13	48.6	1.1	2.2e-10	40.3	0.8	2.1	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
RHH_1	PF01402.16	gi|568163623|ref|YP_008946984.1|	-	3.8e-11	42.3	0.5	5.6e-11	41.8	0.4	1.3	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
RHH_3	PF12651.2	gi|568163623|ref|YP_008946984.1|	-	6.1e-07	29.0	1.5	7.1e-07	28.8	0.5	1.5	1	1	1	2	2	2	1	Ribbon-helix-helix	domain
Ribosomal_L17	PF01196.14	gi|568163623|ref|YP_008946984.1|	-	0.11	13.1	0.1	0.11	13.0	0.1	1.1	1	0	0	1	1	1	0	Ribosomal	protein	L17
Ax_dynein_light	PF10211.4	gi|568163624|ref|YP_008946985.1|	-	0.057	13.2	3.9	0.061	13.1	2.7	1.1	1	0	0	1	1	1	0	Axonemal	dynein	light	chain
MerR-DNA-bind	PF09278.6	gi|568163624|ref|YP_008946985.1|	-	0.11	12.9	0.1	0.61	10.5	0.0	1.9	2	0	0	2	2	2	0	MerR,	DNA	binding
IncA	PF04156.9	gi|568163624|ref|YP_008946985.1|	-	0.34	10.4	2.5	0.38	10.3	1.7	1.1	1	0	0	1	1	1	0	IncA	protein
HalX	PF08663.5	gi|568163624|ref|YP_008946985.1|	-	1.6	8.7	5.9	33	4.5	3.5	2.7	2	1	0	2	2	2	0	HalX	domain
AsnC_trans_reg	PF01037.16	gi|568163625|ref|YP_008946986.1|	-	2.3e-10	40.0	0.4	2.5e-10	39.9	0.3	1.1	1	0	0	1	1	1	1	AsnC	family
ABC2_membrane_3	PF12698.2	gi|568163626|ref|YP_008946987.1|	-	2e-21	76.3	45.1	2.8e-21	75.9	31.3	1.2	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|568163626|ref|YP_008946987.1|	-	3.4e-07	29.6	51.4	1.2e-06	27.9	35.6	1.8	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.2	gi|568163626|ref|YP_008946987.1|	-	1.1e-05	24.4	43.2	0.00019	20.4	29.9	2.9	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
DUF2754	PF10953.3	gi|568163626|ref|YP_008946987.1|	-	0.43	10.6	7.7	8.2	6.5	0.0	3.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2754)
ABC_tran	PF00005.22	gi|568163627|ref|YP_008946988.1|	-	1.5e-26	93.2	0.0	2.3e-26	92.7	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|568163627|ref|YP_008946988.1|	-	7e-15	55.7	1.6	1.1e-12	48.4	1.1	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.1	gi|568163627|ref|YP_008946988.1|	-	4.1e-05	24.0	2.5	7.2e-05	23.2	1.7	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|568163627|ref|YP_008946988.1|	-	0.0012	18.3	0.1	0.0023	17.4	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_30	PF13604.1	gi|568163627|ref|YP_008946988.1|	-	0.0012	18.4	0.0	0.0021	17.6	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|568163627|ref|YP_008946988.1|	-	0.003	16.8	0.2	0.029	13.5	0.2	2.0	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_10	PF12846.2	gi|568163627|ref|YP_008946988.1|	-	0.017	14.5	0.2	0.18	11.2	0.0	2.0	1	1	1	2	2	2	0	AAA-like	domain
UPF0079	PF02367.12	gi|568163627|ref|YP_008946988.1|	-	0.029	13.9	0.1	0.057	13.0	0.1	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_17	PF13207.1	gi|568163627|ref|YP_008946988.1|	-	0.03	15.1	0.1	0.053	14.3	0.1	1.6	1	1	0	1	1	1	0	AAA	domain
T2SE	PF00437.15	gi|568163627|ref|YP_008946988.1|	-	0.038	12.8	0.1	0.058	12.2	0.1	1.2	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_19	PF13245.1	gi|568163627|ref|YP_008946988.1|	-	0.042	13.5	0.0	0.09	12.5	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
SRP54	PF00448.17	gi|568163627|ref|YP_008946988.1|	-	0.054	12.9	0.1	0.085	12.2	0.1	1.3	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA	PF00004.24	gi|568163627|ref|YP_008946988.1|	-	0.067	13.4	0.0	0.12	12.5	0.0	1.6	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.1	gi|568163627|ref|YP_008946988.1|	-	0.1	12.5	0.0	0.13	12.1	0.0	1.3	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_22	PF13401.1	gi|568163627|ref|YP_008946988.1|	-	0.12	12.5	0.3	0.31	11.1	0.2	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_15	PF13175.1	gi|568163627|ref|YP_008946988.1|	-	0.3	10.0	4.4	0.25	10.3	0.3	2.2	2	1	1	3	3	3	0	AAA	ATPase	domain
SRI	PF08236.6	gi|568163628|ref|YP_008946989.1|	-	0.0078	16.1	0.1	0.02	14.8	0.1	1.7	1	0	0	1	1	1	1	SRI	(Set2	Rpb1	interacting)	domain
DUF3660	PF12398.3	gi|568163628|ref|YP_008946989.1|	-	0.017	14.9	0.4	7.2	6.5	0.1	2.4	2	0	0	2	2	2	0	Receptor	serine/threonine	kinase
MazG-like	PF12643.2	gi|568163628|ref|YP_008946989.1|	-	0.024	14.5	0.7	0.057	13.3	0.3	1.7	1	1	0	1	1	1	0	MazG-like	family
DUF2265	PF10023.4	gi|568163628|ref|YP_008946989.1|	-	0.072	12.2	2.3	0.079	12.0	0.5	1.7	2	0	0	2	2	2	0	Predicted	aminopeptidase	(DUF2265)
DUF3368	PF11848.3	gi|568163628|ref|YP_008946989.1|	-	0.098	12.2	0.0	0.27	10.8	0.0	1.8	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3368)
Pantoate_transf	PF02548.10	gi|568163629|ref|YP_008946990.1|	-	4.9e-107	356.8	0.1	5.7e-107	356.7	0.1	1.0	1	0	0	1	1	1	1	Ketopantoate	hydroxymethyltransferase
PEP_mutase	PF13714.1	gi|568163629|ref|YP_008946990.1|	-	7e-07	28.6	0.2	0.00012	21.4	0.0	2.7	1	1	2	3	3	3	2	Phosphoenolpyruvate	phosphomutase
DUF849	PF05853.7	gi|568163629|ref|YP_008946990.1|	-	0.051	12.4	0.1	0.073	11.9	0.0	1.2	1	0	0	1	1	1	0	Prokaryotic	protein	of	unknown	function	(DUF849)
MinE	PF03776.9	gi|568163629|ref|YP_008946990.1|	-	0.088	12.3	0.1	0.22	11.0	0.1	1.7	1	0	0	1	1	1	0	Septum	formation	topological	specificity	factor	MinE
DUF137	PF02006.11	gi|568163630|ref|YP_008946991.1|	-	6.4e-81	269.9	4.6	8.9e-81	269.5	3.2	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF137
TPP_enzyme_M	PF00205.17	gi|568163630|ref|YP_008946991.1|	-	0.011	15.4	0.4	0.099	12.3	0.3	2.2	1	1	0	1	1	1	0	Thiamine	pyrophosphate	enzyme,	central	domain
Arabinose_Isome	PF02610.10	gi|568163630|ref|YP_008946991.1|	-	0.035	13.0	0.4	0.073	12.0	0.0	1.6	2	0	0	2	2	2	0	L-arabinose	isomerase
Erf4	PF10256.4	gi|568163630|ref|YP_008946991.1|	-	0.056	13.3	0.3	0.093	12.6	0.2	1.4	1	0	0	1	1	1	0	Golgin	subfamily	A	member	7/ERF4	family
GHMP_kinases_N	PF00288.21	gi|568163631|ref|YP_008946992.1|	-	0.00018	21.4	0.2	0.0003	20.7	0.2	1.3	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
MoaE	PF02391.12	gi|568163632|ref|YP_008946994.1|	-	4.5e-18	65.1	0.2	7.6e-18	64.4	0.1	1.4	1	0	0	1	1	1	1	MoaE	protein
ThiS	PF02597.15	gi|568163632|ref|YP_008946994.1|	-	8.5e-13	48.5	0.3	9e-12	45.2	0.1	2.4	2	0	0	2	2	2	1	ThiS	family
DUF2577	PF10844.3	gi|568163632|ref|YP_008946994.1|	-	0.039	14.0	0.0	5.5	7.0	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2577)
CobT_C	PF11775.3	gi|568163632|ref|YP_008946994.1|	-	0.071	12.5	0.1	5.3	6.3	0.0	2.3	1	1	1	2	2	2	0	Cobalamin	biosynthesis	protein	CobT	VWA	domain
Phos_pyr_kin	PF08543.7	gi|568163633|ref|YP_008946995.1|	-	8.2e-69	231.5	0.0	1e-68	231.1	0.0	1.1	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
Aldolase_2	PF10120.4	gi|568163633|ref|YP_008946995.1|	-	8.7e-53	178.1	0.0	1.3e-52	177.5	0.0	1.3	1	0	0	1	1	1	1	Putative	aldolase
PfkB	PF00294.19	gi|568163633|ref|YP_008946995.1|	-	1.8e-07	30.5	0.0	1.4e-06	27.7	0.0	1.9	2	0	0	2	2	2	1	pfkB	family	carbohydrate	kinase
Carb_kinase	PF01256.12	gi|568163633|ref|YP_008946995.1|	-	0.054	12.7	0.0	0.1	11.8	0.0	1.4	1	0	0	1	1	1	0	Carbohydrate	kinase
HD_3	PF13023.1	gi|568163634|ref|YP_008946996.1|	-	4.5e-14	52.5	0.0	1.4e-13	50.8	0.0	1.7	1	1	0	1	1	1	1	HD	domain
HD	PF01966.17	gi|568163634|ref|YP_008946996.1|	-	2.2e-06	27.7	0.0	6e-06	26.2	0.0	1.7	1	1	0	1	1	1	1	HD	domain
HDOD	PF08668.7	gi|568163634|ref|YP_008946996.1|	-	0.00017	20.9	0.0	0.00025	20.4	0.0	1.2	1	0	0	1	1	1	1	HDOD	domain
HD_2	PF12917.2	gi|568163634|ref|YP_008946996.1|	-	0.038	13.7	1.8	1.3	8.7	1.3	2.0	1	1	0	1	1	1	0	HD	containing	hydrolase-like	enzyme
HHH_4	PF14490.1	gi|568163634|ref|YP_008946996.1|	-	0.089	12.5	0.2	0.2	11.4	0.1	1.6	1	0	0	1	1	1	0	Helix-hairpin-helix	containing	domain
Pyrophosphatase	PF00719.14	gi|568163635|ref|YP_008946997.1|	-	6.6e-62	207.5	0.1	7.4e-62	207.4	0.1	1.0	1	0	0	1	1	1	1	Inorganic	pyrophosphatase
Glyco_tranf_2_3	PF13641.1	gi|568163636|ref|YP_008946998.1|	-	8.4e-27	94.4	0.0	1.4e-26	93.7	0.0	1.3	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|568163636|ref|YP_008946998.1|	-	4.3e-24	85.3	0.1	6.8e-24	84.6	0.1	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glycos_transf_2	PF00535.21	gi|568163636|ref|YP_008946998.1|	-	3.3e-19	69.1	0.1	4.9e-19	68.6	0.1	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_2	PF10111.4	gi|568163636|ref|YP_008946998.1|	-	1.6e-17	63.5	0.9	1.9e-17	63.2	0.6	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_transf_21	PF13506.1	gi|568163636|ref|YP_008946998.1|	-	3e-11	42.9	0.0	1.9e-09	37.0	0.0	2.2	2	0	0	2	2	2	1	Glycosyl	transferase	family	21
Cellulose_synt	PF03552.9	gi|568163636|ref|YP_008946998.1|	-	2.8e-05	22.6	1.7	4.6e-05	21.9	1.2	1.3	1	0	0	1	1	1	1	Cellulose	synthase
DUF2854	PF11016.3	gi|568163636|ref|YP_008946998.1|	-	0.03	13.8	0.0	0.08	12.4	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2854)
FIST_C	PF10442.4	gi|568163636|ref|YP_008946998.1|	-	0.16	11.8	0.0	0.27	11.1	0.0	1.3	1	0	0	1	1	1	0	FIST	C	domain
TGS	PF02824.16	gi|568163637|ref|YP_008946999.1|	-	8.8e-19	67.1	0.0	1.7e-18	66.1	0.0	1.5	1	0	0	1	1	1	1	TGS	domain
RNase_HII	PF01351.13	gi|568163638|ref|YP_008947000.1|	-	1e-45	155.8	0.1	1.1e-45	155.6	0.1	1.0	1	0	0	1	1	1	1	Ribonuclease	HII
AsiA	PF09010.5	gi|568163638|ref|YP_008947000.1|	-	0.059	13.2	0.1	6.8	6.6	0.0	2.7	3	0	0	3	3	3	0	Anti-Sigma	Factor	A
S-AdoMet_synt_C	PF02773.11	gi|568163638|ref|YP_008947000.1|	-	0.14	11.9	0.6	0.35	10.5	0.3	1.9	1	1	0	1	1	1	0	S-adenosylmethionine	synthetase,	C-terminal	domain
NMD3	PF04981.8	gi|568163639|ref|YP_008947001.1|	-	2.4e-44	151.2	2.9	2.8e-44	151.0	2.0	1.0	1	0	0	1	1	1	1	NMD3	family
DZR	PF12773.2	gi|568163639|ref|YP_008947001.1|	-	0.00052	19.7	2.0	0.019	14.7	0.7	2.6	2	1	0	2	2	2	1	Double	zinc	ribbon
Nudix_N_2	PF14803.1	gi|568163639|ref|YP_008947001.1|	-	0.058	13.0	5.2	3.6	7.3	0.0	3.3	3	0	0	3	3	3	0	Nudix	N-terminal
Dioxygenase_N	PF04444.9	gi|568163639|ref|YP_008947001.1|	-	0.069	13.1	0.2	1	9.3	0.0	2.4	2	0	0	2	2	2	0	Catechol	dioxygenase	N	terminus
GFA	PF04828.9	gi|568163639|ref|YP_008947001.1|	-	0.2	11.6	1.4	33	4.5	0.1	3.2	3	0	0	3	3	3	0	Glutathione-dependent	formaldehyde-activating	enzyme
NOB1_Zn_bind	PF08772.6	gi|568163639|ref|YP_008947001.1|	-	0.28	11.0	5.5	1.5	8.7	0.2	3.0	2	1	1	3	3	3	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
FYVE	PF01363.16	gi|568163639|ref|YP_008947001.1|	-	0.29	11.0	4.1	0.49	10.3	1.5	2.1	2	0	0	2	2	2	0	FYVE	zinc	finger
zf-ribbon_3	PF13248.1	gi|568163639|ref|YP_008947001.1|	-	0.56	9.4	6.1	5.9	6.2	0.5	3.1	3	0	0	3	3	3	0	zinc-ribbon	domain
zf-C4pol	PF14260.1	gi|568163639|ref|YP_008947001.1|	-	0.98	9.4	3.9	13	5.8	0.1	2.6	2	1	0	2	2	2	0	C4-type	zinc-finger	of	DNA	polymerase	delta
zinc_ribbon_2	PF13240.1	gi|568163639|ref|YP_008947001.1|	-	1.1	8.8	6.3	9.2	5.9	0.7	3.1	3	0	0	3	3	3	0	zinc-ribbon	domain
Rpr2	PF04032.11	gi|568163639|ref|YP_008947001.1|	-	2.9	7.8	6.0	0.68	9.8	0.1	2.7	2	1	1	3	3	3	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
zf-HIT	PF04438.11	gi|568163639|ref|YP_008947001.1|	-	8	6.2	8.3	7.6	6.2	0.2	3.2	3	0	0	3	3	3	0	HIT	zinc	finger
DUF424	PF04242.8	gi|568163640|ref|YP_008947002.1|	-	1.8e-24	85.6	1.0	2.1e-24	85.3	0.7	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF424)
eIF-5_eIF-2B	PF01873.12	gi|568163641|ref|YP_008947003.1|	-	1.5e-29	102.1	0.2	1.8e-29	101.9	0.1	1.0	1	0	0	1	1	1	1	Domain	found	in	IF2B/IF5
RNA_POL_M_15KD	PF02150.11	gi|568163641|ref|YP_008947003.1|	-	0.0088	15.7	0.1	0.13	11.9	0.0	2.2	2	0	0	2	2	2	1	RNA	polymerases	M/15	Kd	subunit
SUI1	PF01253.17	gi|568163641|ref|YP_008947003.1|	-	0.05	13.4	0.0	0.092	12.5	0.0	1.4	1	0	0	1	1	1	0	Translation	initiation	factor	SUI1
zinc_ribbon_6	PF14599.1	gi|568163641|ref|YP_008947003.1|	-	0.074	12.8	0.5	2	8.2	0.0	2.3	2	0	0	2	2	2	0	Zinc-ribbon
DUF2387	PF09526.5	gi|568163641|ref|YP_008947003.1|	-	0.083	12.8	0.3	0.15	11.9	0.2	1.4	1	0	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
Ribosomal_S27e	PF01667.12	gi|568163641|ref|YP_008947003.1|	-	0.088	12.3	0.6	0.16	11.4	0.4	1.4	1	0	0	1	1	1	0	Ribosomal	protein	S27
Cys_rich_KTR	PF14205.1	gi|568163641|ref|YP_008947003.1|	-	0.32	10.4	4.2	1.2	8.6	0.0	2.8	2	1	1	3	3	3	0	Cysteine-rich	KTR
Radical_SAM	PF04055.16	gi|568163642|ref|YP_008947004.1|	-	1.7e-25	90.1	0.2	8.9e-25	87.7	0.1	2.0	2	0	0	2	2	2	1	Radical	SAM	superfamily
UPF0004	PF00919.15	gi|568163642|ref|YP_008947004.1|	-	4.5e-24	84.1	0.2	8.3e-24	83.2	0.1	1.4	1	0	0	1	1	1	1	Uncharacterized	protein	family	UPF0004
TRAM	PF01938.15	gi|568163642|ref|YP_008947004.1|	-	1.7e-06	27.6	0.1	4e-06	26.5	0.0	1.6	1	0	0	1	1	1	1	TRAM	domain
Thiolase_N	PF00108.18	gi|568163643|ref|YP_008947005.1|	-	4.7e-85	284.7	0.6	5.6e-85	284.5	0.4	1.1	1	0	0	1	1	1	1	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.13	gi|568163643|ref|YP_008947005.1|	-	9.2e-37	125.2	0.0	2e-36	124.0	0.0	1.6	1	0	0	1	1	1	1	Thiolase,	C-terminal	domain
ketoacyl-synt	PF00109.21	gi|568163643|ref|YP_008947005.1|	-	1.8e-05	24.3	1.4	4.4e-05	23.0	0.9	1.7	1	1	1	2	2	2	1	Beta-ketoacyl	synthase,	N-terminal	domain
eIF-1a	PF01176.14	gi|568163644|ref|YP_008947006.1|	-	2.7e-25	87.5	0.5	4e-25	87.0	0.4	1.3	1	0	0	1	1	1	1	Translation	initiation	factor	1A	/	IF-1
RIO1	PF01163.17	gi|568163645|ref|YP_008947007.1|	-	2.9e-62	209.4	0.5	3.8e-62	208.9	0.3	1.2	1	0	0	1	1	1	1	RIO1	family
APH	PF01636.18	gi|568163645|ref|YP_008947007.1|	-	0.0014	18.4	0.0	0.0032	17.2	0.0	1.5	1	1	0	1	1	1	1	Phosphotransferase	enzyme	family
Kdo	PF06293.9	gi|568163645|ref|YP_008947007.1|	-	0.0041	16.2	0.0	0.024	13.7	0.0	2.1	1	1	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
KH_1	PF00013.24	gi|568163646|ref|YP_008947008.1|	-	9.1e-06	25.2	9.5	0.00018	21.0	2.6	2.3	2	0	0	2	2	2	2	KH	domain
KH_3	PF13014.1	gi|568163646|ref|YP_008947008.1|	-	0.0002	20.9	3.0	0.012	15.2	0.3	2.6	2	0	0	2	2	2	2	KH	domain
KH_2	PF07650.12	gi|568163646|ref|YP_008947008.1|	-	2.2	7.9	7.7	0.78	9.3	0.7	2.6	3	0	0	3	3	3	0	KH	domain
DUF3883	PF13020.1	gi|568163647|ref|YP_008947009.1|	-	0.0017	18.0	0.4	0.0042	16.7	0.2	1.8	1	1	1	2	2	2	1	Domain	of	unknown	function	(DUF3883)
DUF1152	PF06626.7	gi|568163648|ref|YP_008947010.1|	-	2.2e-121	404.5	0.1	2.5e-121	404.3	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1152)
Pribosyltran	PF00156.22	gi|568163648|ref|YP_008947010.1|	-	0.0039	16.9	0.1	0.016	14.9	0.0	2.0	3	0	0	3	3	3	1	Phosphoribosyl	transferase	domain
HHH_8	PF14716.1	gi|568163648|ref|YP_008947010.1|	-	0.16	12.2	1.0	0.26	11.4	0.2	1.8	2	0	0	2	2	2	0	Helix-hairpin-helix	domain
MMgT	PF10270.4	gi|568163650|ref|YP_008947012.1|	-	0.00056	20.3	0.0	0.00078	19.8	0.0	1.1	1	0	0	1	1	1	1	Membrane	magnesium	transporter
zf-C2H2_4	PF13894.1	gi|568163650|ref|YP_008947012.1|	-	0.026	14.8	0.3	0.044	14.1	0.2	1.4	1	0	0	1	1	1	0	C2H2-type	zinc	finger
S_100	PF01023.14	gi|568163650|ref|YP_008947012.1|	-	0.12	11.6	0.5	0.41	10.0	0.2	1.9	2	0	0	2	2	2	0	S-100/ICaBP	type	calcium	binding	domain
Cys_Met_Meta_PP	PF01053.15	gi|568163651|ref|YP_008947013.1|	-	2.8e-122	407.7	0.1	3.5e-122	407.4	0.1	1.0	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Aminotran_1_2	PF00155.16	gi|568163651|ref|YP_008947013.1|	-	1.8e-10	40.3	0.1	1.5e-09	37.2	0.1	2.1	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.14	gi|568163651|ref|YP_008947013.1|	-	3.2e-08	32.7	0.3	2.2e-07	29.9	0.2	2.2	1	1	0	1	1	1	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.16	gi|568163651|ref|YP_008947013.1|	-	0.00075	18.7	0.0	0.0083	15.3	0.0	2.1	1	1	0	1	1	1	1	Beta-eliminating	lyase
Met_gamma_lyase	PF06838.6	gi|568163651|ref|YP_008947013.1|	-	0.019	13.3	0.2	0.79	7.9	0.1	2.1	1	1	0	1	1	1	0	Methionine	gamma-lyase
GHMP_kinases_N	PF00288.21	gi|568163652|ref|YP_008947014.1|	-	1.2e-16	60.5	3.0	3.9e-16	58.8	2.1	1.9	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|568163652|ref|YP_008947014.1|	-	2e-07	31.1	0.1	6.6e-07	29.4	0.0	1.9	2	0	0	2	2	2	1	GHMP	kinases	C	terminal
DUF647	PF04884.9	gi|568163652|ref|YP_008947014.1|	-	0.06	12.5	0.0	0.15	11.2	0.0	1.6	2	0	0	2	2	2	0	Vitamin	B6	photo-protection	and	homoeostasis
MoeA_N	PF03453.12	gi|568163653|ref|YP_008947015.1|	-	6e-46	155.7	0.0	1.5e-45	154.4	0.0	1.7	1	0	0	1	1	1	1	MoeA	N-terminal	region	(domain	I	and	II)
MoCF_biosynth	PF00994.19	gi|568163653|ref|YP_008947015.1|	-	4.9e-29	100.5	0.1	8.9e-29	99.7	0.0	1.4	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
MoeA_C	PF03454.10	gi|568163653|ref|YP_008947015.1|	-	2e-13	50.0	0.0	6.1e-13	48.5	0.0	1.9	1	0	0	1	1	1	1	MoeA	C-terminal	region	(domain	IV)
PqqD	PF05402.7	gi|568163654|ref|YP_008947016.1|	-	3.4e-11	42.9	0.1	4.8e-11	42.5	0.1	1.2	1	0	0	1	1	1	1	Coenzyme	PQQ	synthesis	protein	D	(PqqD)
tRNA_anti-codon	PF01336.20	gi|568163655|ref|YP_008947017.1|	-	7.9e-07	28.8	0.2	1.2e-06	28.2	0.2	1.2	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
POT1	PF02765.12	gi|568163655|ref|YP_008947017.1|	-	0.041	13.7	0.0	0.15	11.9	0.0	1.7	1	1	0	1	1	1	0	Telomeric	single	stranded	DNA	binding	POT1/CDC13
GTP_EFTU_D2	PF03144.20	gi|568163655|ref|YP_008947017.1|	-	0.067	13.3	0.1	0.5	10.5	0.0	2.1	2	0	0	2	2	2	0	Elongation	factor	Tu	domain	2
AAA_5	PF07728.9	gi|568163656|ref|YP_008947018.1|	-	4.6e-27	94.4	0.1	1.5e-26	92.7	0.0	1.9	2	1	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.1	gi|568163656|ref|YP_008947018.1|	-	5e-07	29.8	0.3	2e-06	27.8	0.2	2.3	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA	PF00004.24	gi|568163656|ref|YP_008947018.1|	-	1.4e-05	25.2	0.2	0.00037	20.7	0.0	2.7	3	1	0	3	3	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Mg_chelatase	PF01078.16	gi|568163656|ref|YP_008947018.1|	-	3.7e-05	22.9	0.1	0.00034	19.8	0.0	2.2	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_3	PF07726.6	gi|568163656|ref|YP_008947018.1|	-	0.00015	21.3	0.0	0.00024	20.7	0.0	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.1	gi|568163656|ref|YP_008947018.1|	-	0.00049	20.2	0.7	0.0058	16.7	0.0	2.9	2	2	0	2	2	2	1	AAA	domain
MCM	PF00493.18	gi|568163656|ref|YP_008947018.1|	-	0.0012	17.6	0.0	0.0069	15.2	0.0	2.0	2	0	0	2	2	2	1	MCM2/3/5	family
Sigma54_activat	PF00158.21	gi|568163656|ref|YP_008947018.1|	-	0.0024	17.3	0.0	0.0089	15.5	0.0	1.9	1	1	0	1	1	1	1	Sigma-54	interaction	domain
PMC2NT	PF08066.7	gi|568163656|ref|YP_008947018.1|	-	0.037	14.3	0.1	0.11	12.7	0.0	1.8	1	0	0	1	1	1	0	PMC2NT	(NUC016)	domain
Sigma54_activ_2	PF14532.1	gi|568163656|ref|YP_008947018.1|	-	0.058	13.4	0.4	0.61	10.1	0.0	2.7	2	2	0	2	2	2	0	Sigma-54	interaction	domain
AAA_17	PF13207.1	gi|568163656|ref|YP_008947018.1|	-	0.1	13.4	0.3	0.78	10.5	0.0	2.4	1	1	0	2	2	2	0	AAA	domain
VWA_2	PF13519.1	gi|568163657|ref|YP_008947019.1|	-	1.5e-09	38.1	0.0	3.3e-09	37.0	0.0	1.5	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.23	gi|568163657|ref|YP_008947019.1|	-	4.5e-08	33.0	0.4	1.4e-07	31.4	0.0	1.9	2	0	0	2	2	2	1	von	Willebrand	factor	type	A	domain
VWA_3	PF13768.1	gi|568163657|ref|YP_008947019.1|	-	7.5e-08	32.2	0.0	2.2e-07	30.6	0.0	1.8	2	0	0	2	2	2	1	von	Willebrand	factor	type	A	domain
VWA_CoxE	PF05762.9	gi|568163657|ref|YP_008947019.1|	-	1.3e-05	24.4	0.0	2.4e-05	23.6	0.0	1.5	1	0	0	1	1	1	1	VWA	domain	containing	CoxE-like	protein
LEDGF	PF11467.3	gi|568163657|ref|YP_008947019.1|	-	0.054	13.1	1.0	0.52	10.0	0.6	2.5	2	0	0	2	2	2	0	Lens	epithelium-derived	growth	factor	(LEDGF)
GHL1-3	PF11308.3	gi|568163657|ref|YP_008947019.1|	-	0.16	11.2	0.4	0.33	10.2	0.2	1.5	2	0	0	2	2	2	0	Glycosyl	hydrolases	related	to	GH101	family,	GHL1-GHL3
CCG	PF02754.11	gi|568163659|ref|YP_008947021.1|	-	1.8e-35	120.8	0.3	2.4e-18	65.9	0.1	2.2	2	0	0	2	2	2	2	Cysteine-rich	domain
Fer2_3	PF13085.1	gi|568163660|ref|YP_008947022.1|	-	2.8e-32	110.8	0.1	5e-32	110.0	0.0	1.4	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_8	PF13183.1	gi|568163660|ref|YP_008947022.1|	-	4.1e-12	45.9	3.4	4.1e-12	45.9	2.3	2.0	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|568163660|ref|YP_008947022.1|	-	2.7e-09	36.7	15.1	2.6e-08	33.5	3.9	2.4	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|568163660|ref|YP_008947022.1|	-	7.3e-08	32.5	13.7	1.2e-07	31.8	3.7	2.7	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|568163660|ref|YP_008947022.1|	-	1.8e-07	31.4	4.7	1.8e-07	31.4	3.2	2.5	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|568163660|ref|YP_008947022.1|	-	3e-07	30.6	12.2	3.1e-06	27.4	3.4	2.6	2	1	1	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|568163660|ref|YP_008947022.1|	-	5.6e-06	26.6	2.9	0.066	13.6	0.1	2.8	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|568163660|ref|YP_008947022.1|	-	3.4e-05	23.5	17.4	0.00019	21.1	0.9	3.1	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|568163660|ref|YP_008947022.1|	-	0.00028	20.5	18.1	0.0012	18.6	0.4	3.0	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4	PF00037.22	gi|568163660|ref|YP_008947022.1|	-	0.00056	19.4	20.0	0.0054	16.2	2.0	3.0	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|568163660|ref|YP_008947022.1|	-	0.0013	18.5	10.4	0.054	13.3	0.3	2.8	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|568163660|ref|YP_008947022.1|	-	0.0018	18.6	7.0	0.082	13.3	1.3	2.9	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_15	PF13459.1	gi|568163660|ref|YP_008947022.1|	-	0.002	18.6	4.9	0.13	12.8	0.6	2.7	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_20	PF14691.1	gi|568163660|ref|YP_008947022.1|	-	0.021	14.4	4.9	1.6	8.3	0.1	2.8	3	0	0	3	3	3	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer2	PF00111.22	gi|568163660|ref|YP_008947022.1|	-	0.089	12.5	0.5	0.089	12.5	0.3	2.4	2	1	1	3	3	3	0	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer4_4	PF12800.2	gi|568163660|ref|YP_008947022.1|	-	0.11	12.9	18.2	0.11	12.9	0.9	3.1	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|568163660|ref|YP_008947022.1|	-	0.22	12.3	16.2	0.4	11.4	8.6	3.0	2	1	2	4	4	4	0	4Fe-4S	double	cluster	binding	domain
FAD_binding_2	PF00890.19	gi|568163661|ref|YP_008947023.1|	-	3.9e-110	368.5	0.3	4.8e-110	368.2	0.2	1.1	1	0	0	1	1	1	1	FAD	binding	domain
Succ_DH_flav_C	PF02910.15	gi|568163661|ref|YP_008947023.1|	-	6.1e-45	152.2	0.1	9.3e-45	151.6	0.1	1.3	1	0	0	1	1	1	1	Fumarate	reductase	flavoprotein	C-term
DAO	PF01266.19	gi|568163661|ref|YP_008947023.1|	-	9.2e-10	37.9	0.4	1.2e-07	31.0	0.3	2.2	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.9	gi|568163661|ref|YP_008947023.1|	-	5.1e-05	23.2	1.1	0.00031	20.7	0.0	2.6	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|568163661|ref|YP_008947023.1|	-	5.7e-05	22.3	0.1	9.4e-05	21.6	0.1	1.3	1	0	0	1	1	1	1	FAD	binding	domain
NAD_binding_8	PF13450.1	gi|568163661|ref|YP_008947023.1|	-	8e-05	22.5	0.2	0.00033	20.6	0.1	2.1	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.9	gi|568163661|ref|YP_008947023.1|	-	0.00026	19.5	1.5	0.00056	18.4	0.6	1.8	2	0	0	2	2	2	1	HI0933-like	protein
Thi4	PF01946.12	gi|568163661|ref|YP_008947023.1|	-	0.0021	17.2	0.8	0.022	13.8	0.1	2.7	3	0	0	3	3	3	1	Thi4	family
GIDA	PF01134.17	gi|568163661|ref|YP_008947023.1|	-	0.0077	15.1	2.6	0.02	13.7	1.6	1.8	2	0	0	2	2	2	1	Glucose	inhibited	division	protein	A
TMP-TENI	PF02581.12	gi|568163661|ref|YP_008947023.1|	-	0.067	12.2	0.1	0.12	11.4	0.1	1.4	1	0	0	1	1	1	0	Thiamine	monophosphate	synthase/TENI
Lycopene_cycl	PF05834.7	gi|568163661|ref|YP_008947023.1|	-	0.083	11.7	0.1	0.15	10.9	0.1	1.4	1	0	0	1	1	1	0	Lycopene	cyclase	protein
Hydrolase_6	PF13344.1	gi|568163662|ref|YP_008947024.1|	-	3e-23	81.6	0.0	6.4e-23	80.5	0.0	1.6	2	0	0	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|568163662|ref|YP_008947024.1|	-	1.2e-17	63.3	0.0	3.2e-17	62.0	0.0	1.7	1	0	0	1	1	1	1	HAD-hyrolase-like
Hydrolase	PF00702.21	gi|568163662|ref|YP_008947024.1|	-	0.0002	21.8	0.1	0.0044	17.4	0.1	2.5	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD_2	PF13419.1	gi|568163662|ref|YP_008947024.1|	-	0.00028	21.1	0.0	0.13	12.4	0.0	2.4	2	1	0	2	2	2	2	Haloacid	dehalogenase-like	hydrolase
DUF2070	PF09843.4	gi|568164800|ref|YP_008947026.1|	-	2.2e-33	115.2	0.0	3.1e-33	114.7	0.0	1.1	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2070)
Leader_Erm	PF08253.6	gi|568164800|ref|YP_008947026.1|	-	5.2	6.6	10.3	1.9	8.0	0.9	3.4	3	0	0	3	3	3	0	Erm	Leader	peptide
DAO	PF01266.19	gi|568163663|ref|YP_008947027.1|	-	1.7e-12	46.9	0.0	7.3e-09	34.9	0.0	2.1	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|568163663|ref|YP_008947027.1|	-	6.2e-11	41.7	0.1	3.3e-06	26.2	0.0	2.2	1	1	1	2	2	2	2	FAD	binding	domain
Pyr_redox_2	PF07992.9	gi|568163663|ref|YP_008947027.1|	-	7.8e-09	35.6	0.0	1.4e-08	34.9	0.0	1.4	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|568163663|ref|YP_008947027.1|	-	2.3e-07	30.1	0.1	4.9e-05	22.5	0.0	2.6	2	1	0	2	2	2	1	FAD	binding	domain
GIDA	PF01134.17	gi|568163663|ref|YP_008947027.1|	-	2.7e-07	29.8	0.0	5.5e-07	28.7	0.0	1.5	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
NAD_binding_8	PF13450.1	gi|568163663|ref|YP_008947027.1|	-	7.5e-07	29.0	0.1	5.4e-06	26.3	0.0	2.3	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
FAD_oxidored	PF12831.2	gi|568163663|ref|YP_008947027.1|	-	9.2e-07	28.2	0.0	4.3e-06	26.0	0.0	2.0	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
Thi4	PF01946.12	gi|568163663|ref|YP_008947027.1|	-	4.8e-05	22.5	0.0	0.00056	19.0	0.0	2.2	2	0	0	2	2	2	1	Thi4	family
Trp_halogenase	PF04820.9	gi|568163663|ref|YP_008947027.1|	-	0.00017	20.3	0.0	0.017	13.7	0.0	2.4	2	1	0	2	2	2	1	Tryptophan	halogenase
Lycopene_cycl	PF05834.7	gi|568163663|ref|YP_008947027.1|	-	0.00053	19.0	0.0	0.001	18.0	0.0	1.4	1	0	0	1	1	1	1	Lycopene	cyclase	protein
Pyr_redox	PF00070.22	gi|568163663|ref|YP_008947027.1|	-	0.0013	19.1	0.0	0.0039	17.5	0.0	1.9	2	0	0	2	2	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|568163663|ref|YP_008947027.1|	-	0.0017	16.8	0.0	0.0029	16.1	0.0	1.3	1	0	0	1	1	1	1	HI0933-like	protein
Pyr_redox_3	PF13738.1	gi|568163663|ref|YP_008947027.1|	-	0.013	15.5	0.1	0.11	12.5	0.0	2.4	1	1	1	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
GDI	PF00996.13	gi|568163663|ref|YP_008947027.1|	-	0.021	13.1	0.0	0.036	12.3	0.0	1.4	1	0	0	1	1	1	0	GDP	dissociation	inhibitor
NAD_binding_9	PF13454.1	gi|568163663|ref|YP_008947027.1|	-	0.072	12.8	0.0	0.18	11.5	0.0	1.7	1	0	0	1	1	1	0	FAD-NAD(P)-binding
NAD_binding_7	PF13241.1	gi|568163663|ref|YP_008947027.1|	-	0.076	13.2	0.0	0.28	11.4	0.0	2.0	1	1	1	2	2	2	0	Putative	NAD(P)-binding
3HCDH_N	PF02737.13	gi|568163663|ref|YP_008947027.1|	-	0.15	11.6	0.0	0.27	10.8	0.0	1.4	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Metallophos_2	PF12850.2	gi|568163666|ref|YP_008947030.1|	-	6.7e-12	45.5	0.0	7.6e-12	45.3	0.0	1.0	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
DUF3529	PF12046.3	gi|568163666|ref|YP_008947030.1|	-	0.059	12.3	0.0	0.13	11.2	0.0	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3529)
MadL	PF03817.8	gi|568163667|ref|YP_008947031.1|	-	3.9	7.3	11.5	0.22	11.3	3.3	2.0	1	1	1	2	2	2	0	Malonate	transporter	MadL	subunit
DUF3493	PF11998.3	gi|568163667|ref|YP_008947031.1|	-	5.8	6.8	6.5	6.9	6.6	0.4	2.6	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3493)
Pyr_redox_2	PF07992.9	gi|568163668|ref|YP_008947032.1|	-	4e-06	26.8	0.0	7.8e-06	25.9	0.0	1.5	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|568163668|ref|YP_008947032.1|	-	2.9e-05	24.0	0.2	7.6e-05	22.6	0.0	1.8	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
DAO	PF01266.19	gi|568163668|ref|YP_008947032.1|	-	0.0026	16.7	0.1	0.04	12.8	0.1	2.0	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
FAD_binding_3	PF01494.14	gi|568163668|ref|YP_008947032.1|	-	0.013	14.5	0.0	0.021	13.9	0.0	1.3	1	0	0	1	1	1	0	FAD	binding	domain
Pyr_redox	PF00070.22	gi|568163668|ref|YP_008947032.1|	-	0.017	15.5	0.1	0.12	12.8	0.0	2.2	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|568163668|ref|YP_008947032.1|	-	0.032	14.2	0.1	0.089	12.8	0.1	1.7	1	1	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|568163668|ref|YP_008947032.1|	-	0.044	12.2	0.0	0.084	11.3	0.0	1.4	1	0	0	1	1	1	0	HI0933-like	protein
GIDA	PF01134.17	gi|568163668|ref|YP_008947032.1|	-	0.052	12.4	0.0	0.12	11.2	0.0	1.5	1	1	0	1	1	1	0	Glucose	inhibited	division	protein	A
Lycopene_cycl	PF05834.7	gi|568163668|ref|YP_008947032.1|	-	0.066	12.1	0.0	0.48	9.2	0.0	2.2	3	0	0	3	3	3	0	Lycopene	cyclase	protein
HTH_AsnC-type	PF13404.1	gi|568163669|ref|YP_008947033.1|	-	2e-18	65.6	0.3	3.7e-18	64.7	0.2	1.5	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_24	PF13412.1	gi|568163669|ref|YP_008947033.1|	-	4.3e-18	64.4	0.8	8.8e-18	63.4	0.6	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
AsnC_trans_reg	PF01037.16	gi|568163669|ref|YP_008947033.1|	-	1.5e-15	56.6	0.1	2.2e-15	56.1	0.1	1.3	1	0	0	1	1	1	1	AsnC	family
HTH_11	PF08279.7	gi|568163669|ref|YP_008947033.1|	-	4.7e-07	29.3	0.3	1.1e-06	28.1	0.0	1.8	2	0	0	2	2	1	1	HTH	domain
HTH_Mga	PF08280.6	gi|568163669|ref|YP_008947033.1|	-	0.00016	21.3	0.0	0.00032	20.3	0.0	1.5	1	0	0	1	1	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
MarR_2	PF12802.2	gi|568163669|ref|YP_008947033.1|	-	0.00019	20.9	0.0	0.00044	19.8	0.0	1.5	1	0	0	1	1	1	1	MarR	family
Sigma70_r4	PF04545.11	gi|568163669|ref|YP_008947033.1|	-	0.00032	19.9	0.6	0.0083	15.4	0.0	2.9	2	1	1	3	3	3	1	Sigma-70,	region	4
MarR	PF01047.17	gi|568163669|ref|YP_008947033.1|	-	0.00032	20.3	0.3	0.0014	18.2	0.1	2.0	2	1	0	3	3	2	1	MarR	family
HTH_5	PF01022.15	gi|568163669|ref|YP_008947033.1|	-	0.00034	20.2	0.0	0.00073	19.1	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_Tnp_ISL3	PF13542.1	gi|568163669|ref|YP_008947033.1|	-	0.0012	17.9	0.0	0.0024	16.9	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_20	PF12840.2	gi|568163669|ref|YP_008947033.1|	-	0.0018	18.0	0.0	0.0043	16.8	0.0	1.6	2	0	0	2	2	1	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|568163669|ref|YP_008947033.1|	-	0.0018	17.8	0.0	0.0098	15.5	0.0	2.0	2	0	0	2	2	2	1	Homeodomain-like	domain
HTH_27	PF13463.1	gi|568163669|ref|YP_008947033.1|	-	0.0033	17.6	0.0	0.0088	16.3	0.0	1.7	2	0	0	2	2	1	1	Winged	helix	DNA-binding	domain
HTH_34	PF13601.1	gi|568163669|ref|YP_008947033.1|	-	0.0043	17.0	0.0	0.0086	16.0	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|568163669|ref|YP_008947033.1|	-	0.0055	16.3	0.0	0.012	15.3	0.0	1.7	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
NapD	PF03927.8	gi|568163669|ref|YP_008947033.1|	-	0.0081	15.9	0.0	0.015	15.1	0.0	1.4	1	0	0	1	1	1	1	NapD	protein
ACT_4	PF13291.1	gi|568163669|ref|YP_008947033.1|	-	0.0082	16.4	0.0	0.097	13.0	0.0	2.4	2	0	0	2	2	2	1	ACT	domain
GerE	PF00196.14	gi|568163669|ref|YP_008947033.1|	-	0.012	14.9	0.7	0.038	13.3	0.1	2.0	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
Sigma70_r4_2	PF08281.7	gi|568163669|ref|YP_008947033.1|	-	0.012	15.0	0.2	0.046	13.1	0.1	2.0	2	0	0	2	2	2	0	Sigma-70,	region	4
HTH_10	PF04967.7	gi|568163669|ref|YP_008947033.1|	-	0.014	14.9	0.2	0.069	12.7	0.0	2.2	2	1	0	2	2	2	0	HTH	DNA	binding	domain
HTH_IclR	PF09339.5	gi|568163669|ref|YP_008947033.1|	-	0.019	14.5	0.0	0.033	13.7	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|568163669|ref|YP_008947033.1|	-	0.024	14.5	0.1	0.064	13.1	0.0	1.7	2	0	0	2	2	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
LexA_DNA_bind	PF01726.11	gi|568163669|ref|YP_008947033.1|	-	0.028	13.9	0.0	0.061	12.8	0.0	1.6	1	0	0	1	1	1	0	LexA	DNA	binding	domain
Mga	PF05043.8	gi|568163669|ref|YP_008947033.1|	-	0.042	14.1	0.0	0.093	13.0	0.0	1.5	1	0	0	1	1	1	0	Mga	helix-turn-helix	domain
NTPase_1	PF03266.10	gi|568163669|ref|YP_008947033.1|	-	0.043	13.5	0.3	0.13	11.9	0.2	2.0	1	1	0	1	1	1	0	NTPase
HTH_38	PF13936.1	gi|568163669|ref|YP_008947033.1|	-	0.047	13.2	0.2	0.097	12.2	0.1	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|568163669|ref|YP_008947033.1|	-	0.051	13.6	0.2	0.38	10.9	0.0	2.2	3	0	0	3	3	2	0	Transcriptional	regulator
HTH_Crp_2	PF13545.1	gi|568163669|ref|YP_008947033.1|	-	0.068	12.9	0.0	0.36	10.6	0.0	2.0	2	1	0	2	2	2	0	Crp-like	helix-turn-helix	domain
Penicillinase_R	PF03965.11	gi|568163669|ref|YP_008947033.1|	-	0.074	13.1	0.0	0.16	12.0	0.0	1.5	1	0	0	1	1	1	0	Penicillinase	repressor
DUF493	PF04359.9	gi|568163669|ref|YP_008947033.1|	-	0.082	13.2	0.1	0.16	12.3	0.0	1.6	2	0	0	2	2	1	0	Protein	of	unknown	function	(DUF493)
MIase	PF02426.11	gi|568163669|ref|YP_008947033.1|	-	0.086	12.6	0.0	0.14	11.9	0.0	1.4	1	0	0	1	1	1	0	Muconolactone	delta-isomerase
HTH_29	PF13551.1	gi|568163669|ref|YP_008947033.1|	-	0.09	12.9	0.0	0.17	12.0	0.0	1.4	1	0	0	1	1	1	0	Winged	helix-turn	helix
HTH_36	PF13730.1	gi|568163669|ref|YP_008947033.1|	-	0.092	12.8	0.0	0.24	11.5	0.0	1.8	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_1	PF00126.22	gi|568163669|ref|YP_008947033.1|	-	0.098	12.4	0.0	0.18	11.5	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
Myb_DNA-bind_6	PF13921.1	gi|568163669|ref|YP_008947033.1|	-	0.14	12.2	0.0	0.29	11.2	0.0	1.5	1	0	0	1	1	1	0	Myb-like	DNA-binding	domain
HTH_40	PF14493.1	gi|568163669|ref|YP_008947033.1|	-	0.15	12.3	0.7	0.68	10.1	0.5	2.3	1	1	0	1	1	1	0	Helix-turn-helix	domain
RimK	PF08443.6	gi|568163670|ref|YP_008947034.1|	-	7e-38	130.0	0.0	8.2e-38	129.7	0.0	1.0	1	0	0	1	1	1	1	RimK-like	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|568163670|ref|YP_008947034.1|	-	2e-12	47.2	0.0	2.4e-12	46.9	0.0	1.1	1	0	0	1	1	1	1	ATP-grasp	domain
GSH-S_ATP	PF02955.11	gi|568163670|ref|YP_008947034.1|	-	4e-12	45.6	0.1	9.5e-12	44.3	0.1	1.6	1	1	0	1	1	1	1	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|568163670|ref|YP_008947034.1|	-	7.9e-11	41.2	0.0	7.4e-10	38.0	0.0	1.9	1	1	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp_3	PF02655.9	gi|568163670|ref|YP_008947034.1|	-	4.5e-08	33.1	0.1	6.6e-08	32.5	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	domain
Synapsin_C	PF02750.9	gi|568163670|ref|YP_008947034.1|	-	7.5e-05	21.9	0.0	8.4e-05	21.7	0.0	1.1	1	0	0	1	1	1	1	Synapsin,	ATP	binding	domain
ATPgrasp_YheCD	PF14398.1	gi|568163670|ref|YP_008947034.1|	-	0.00047	19.0	0.0	0.23	10.2	0.0	2.2	2	0	0	2	2	2	2	YheC/D	like	ATP-grasp
Ins134_P3_kin	PF05770.6	gi|568163670|ref|YP_008947034.1|	-	0.0054	15.7	0.0	0.48	9.3	0.0	2.1	1	1	1	2	2	2	2	Inositol	1,	3,	4-trisphosphate	5/6-kinase
DUF4343	PF14243.1	gi|568163670|ref|YP_008947034.1|	-	0.041	13.7	0.0	0.077	12.8	0.0	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4343)
CP_ATPgrasp_1	PF04174.8	gi|568163670|ref|YP_008947034.1|	-	0.11	11.1	0.0	2	6.9	0.0	2.0	2	0	0	2	2	2	0	A	circularly	permuted	ATPgrasp
polyprenyl_synt	PF00348.12	gi|568163671|ref|YP_008947035.1|	-	4.7e-33	114.1	0.1	7.5e-33	113.4	0.1	1.2	1	0	0	1	1	1	1	Polyprenyl	synthetase
DUF4335	PF14233.1	gi|568163671|ref|YP_008947035.1|	-	0.023	14.1	0.0	0.052	13.0	0.0	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4335)
DUF4252	PF14060.1	gi|568164801|ref|YP_008947036.1|	-	0.0085	15.6	0.1	0.017	14.6	0.1	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4252)
PNP_UDP_1	PF01048.15	gi|568163672|ref|YP_008947037.1|	-	9.6e-46	155.6	0.0	1.1e-45	155.4	0.0	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
Pribosyltran	PF00156.22	gi|568163673|ref|YP_008947038.1|	-	4.8e-21	74.7	0.2	6.7e-21	74.3	0.2	1.2	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.1	gi|568163673|ref|YP_008947038.1|	-	0.00088	18.5	0.0	0.0012	18.1	0.0	1.1	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
eRF1_2	PF03464.10	gi|568163674|ref|YP_008947039.1|	-	2.3e-39	134.7	0.0	3.8e-39	134.0	0.0	1.3	1	0	0	1	1	1	1	eRF1	domain	2
eRF1_3	PF03465.10	gi|568163674|ref|YP_008947039.1|	-	5.4e-21	74.9	3.5	2.6e-20	72.7	0.8	2.7	2	2	0	2	2	2	1	eRF1	domain	3
eRF1_1	PF03463.10	gi|568163674|ref|YP_008947039.1|	-	6.4e-11	41.9	0.0	1.7e-10	40.5	0.0	1.8	1	0	0	1	1	1	1	eRF1	domain	1
m04gp34like	PF12216.3	gi|568164804|ref|YP_008947042.1|	-	0.17	11.1	0.4	0.23	10.8	0.3	1.1	1	0	0	1	1	1	0	Immune	evasion	protein
Rapamycin_bind	PF08771.6	gi|568164805|ref|YP_008947043.1|	-	0.024	14.7	0.2	0.03	14.4	0.1	1.1	1	0	0	1	1	1	0	Rapamycin	binding	domain
Gal-bind_lectin	PF00337.17	gi|568164807|ref|YP_008947045.1|	-	0.072	12.4	0.2	0.22	10.8	0.2	1.7	2	0	0	2	2	2	0	Galactoside-binding	lectin
DUF4190	PF13828.1	gi|568164808|ref|YP_008947046.1|	-	0.011	15.2	6.4	0.011	15.2	4.4	3.8	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4190)
DUF997	PF06196.7	gi|568164808|ref|YP_008947046.1|	-	2.5	7.6	6.9	0.78	9.3	0.2	2.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF997)
Matrilin_ccoil	PF10393.4	gi|568164809|ref|YP_008947047.1|	-	0.2	11.0	0.6	0.32	10.4	0.4	1.3	1	0	0	1	1	1	0	Trimeric	coiled-coil	oligomerisation	domain	of	matrilin
PadR	PF03551.9	gi|568163675|ref|YP_008947048.1|	-	1.2e-10	40.9	0.1	3.6e-10	39.4	0.0	1.8	2	0	0	2	2	2	1	Transcriptional	regulator	PadR-like	family
HTH_45	PF14947.1	gi|568163675|ref|YP_008947048.1|	-	0.0016	18.2	0.3	0.0098	15.6	0.0	2.2	2	0	0	2	2	2	1	Winged	helix-turn-helix
HTH_27	PF13463.1	gi|568163675|ref|YP_008947048.1|	-	0.0061	16.8	0.1	0.034	14.4	0.0	2.2	2	1	0	2	2	2	1	Winged	helix	DNA-binding	domain
Protein_K	PF12283.3	gi|568163675|ref|YP_008947048.1|	-	0.042	13.7	0.7	0.08	12.8	0.5	1.6	1	0	0	1	1	1	0	Bacteriophage	protein	K
Cecropin	PF00272.14	gi|568163675|ref|YP_008947048.1|	-	0.077	12.5	2.2	0.13	11.8	0.2	2.2	2	0	0	2	2	2	0	Cecropin	family
TrmB	PF01978.14	gi|568163675|ref|YP_008947048.1|	-	0.11	12.2	0.5	0.75	9.5	0.0	2.4	2	1	1	3	3	3	0	Sugar-specific	transcriptional	regulator	TrmB
ABC_tran	PF00005.22	gi|568163676|ref|YP_008947049.1|	-	2.4e-30	105.6	0.0	3.9e-30	104.9	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|568163676|ref|YP_008947049.1|	-	4.2e-14	53.1	0.0	8.9e-10	38.9	0.0	2.4	1	1	1	2	2	2	2	AAA	domain
DUF4162	PF13732.1	gi|568163676|ref|YP_008947049.1|	-	2.6e-09	37.4	0.2	4.6e-09	36.6	0.1	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4162)
AAA_29	PF13555.1	gi|568163676|ref|YP_008947049.1|	-	8e-05	22.0	0.1	0.00015	21.1	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|568163676|ref|YP_008947049.1|	-	0.00015	22.1	0.4	0.00022	21.5	0.2	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|568163676|ref|YP_008947049.1|	-	0.00017	20.8	0.2	0.00049	19.2	0.0	1.8	2	0	0	2	2	2	1	AAA	ATPase	domain
SMC_N	PF02463.14	gi|568163676|ref|YP_008947049.1|	-	0.0016	17.7	0.1	0.026	13.7	0.1	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_10	PF12846.2	gi|568163676|ref|YP_008947049.1|	-	0.028	13.8	0.4	0.65	9.3	0.1	2.1	2	0	0	2	2	2	0	AAA-like	domain
AAA	PF00004.24	gi|568163676|ref|YP_008947049.1|	-	0.046	13.9	0.4	0.66	10.1	0.3	2.4	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF258	PF03193.11	gi|568163676|ref|YP_008947049.1|	-	0.085	12.0	0.0	0.15	11.2	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
Rad17	PF03215.10	gi|568163676|ref|YP_008947049.1|	-	0.14	10.8	0.0	0.18	10.4	0.0	1.2	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
ABC2_membrane	PF01061.19	gi|568163677|ref|YP_008947050.1|	-	1.7e-35	122.1	22.1	1.7e-35	122.1	15.3	2.0	2	1	0	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.2	gi|568163677|ref|YP_008947050.1|	-	6.6e-20	71.4	28.6	6.6e-20	71.4	19.8	1.8	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|568163677|ref|YP_008947050.1|	-	3.5e-13	49.2	25.7	5.1e-13	48.7	17.8	1.2	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.2	gi|568163677|ref|YP_008947050.1|	-	1.8e-11	43.4	21.3	2.2e-11	43.1	14.8	1.1	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_5	PF13346.1	gi|568163677|ref|YP_008947050.1|	-	0.54	9.5	27.8	0.042	13.1	14.7	2.3	1	1	0	2	2	2	0	ABC-2	family	transporter	protein
Ald_Xan_dh_C2	PF02738.13	gi|568163678|ref|YP_008947051.1|	-	2.6e-122	408.9	0.0	5.1e-122	407.9	0.0	1.5	1	1	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|568163678|ref|YP_008947051.1|	-	1.9e-17	63.3	0.0	2.2e-15	56.7	0.0	2.5	1	1	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
DUF1947	PF09183.5	gi|568163679|ref|YP_008947052.1|	-	2.3e-30	104.1	1.3	4.1e-30	103.3	0.9	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1947)
PUA	PF01472.15	gi|568163679|ref|YP_008947052.1|	-	1.2e-14	53.7	0.3	2e-14	53.0	0.2	1.3	1	0	0	1	1	1	1	PUA	domain
Glycos_transf_2	PF00535.21	gi|568163680|ref|YP_008947053.1|	-	9.3e-24	84.0	0.1	1.5e-23	83.3	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|568163680|ref|YP_008947053.1|	-	0.0012	18.6	0.0	0.0016	18.3	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_2	PF10111.4	gi|568163680|ref|YP_008947053.1|	-	0.032	13.3	0.0	0.047	12.7	0.0	1.3	1	0	0	1	1	1	0	Glycosyltransferase	like	family	2
PrpR_N	PF06506.6	gi|568163680|ref|YP_008947053.1|	-	0.14	11.5	0.0	0.75	9.1	0.0	1.9	2	0	0	2	2	2	0	Propionate	catabolism	activator
HTH_24	PF13412.1	gi|568163681|ref|YP_008947054.1|	-	8.7e-06	25.0	0.2	1.7e-05	24.1	0.2	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|568163681|ref|YP_008947054.1|	-	8.7e-05	22.0	0.3	0.00025	20.6	0.1	1.9	2	1	0	2	2	2	1	HTH	domain
Med9	PF07544.8	gi|568163681|ref|YP_008947054.1|	-	0.00023	20.8	0.8	0.0014	18.3	0.3	2.0	2	0	0	2	2	2	1	RNA	polymerase	II	transcription	mediator	complex	subunit	9
DUF1875	PF08961.5	gi|568163681|ref|YP_008947054.1|	-	0.0013	18.1	1.7	0.0015	17.8	1.2	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1875)
FeoC	PF09012.5	gi|568163681|ref|YP_008947054.1|	-	0.0013	18.3	0.0	0.0036	16.9	0.0	1.6	1	1	1	2	2	2	1	FeoC	like	transcriptional	regulator
MarR	PF01047.17	gi|568163681|ref|YP_008947054.1|	-	0.0027	17.3	0.1	0.014	15.1	0.0	1.9	2	0	0	2	2	2	1	MarR	family
Prefoldin_2	PF01920.15	gi|568163681|ref|YP_008947054.1|	-	0.0049	16.6	3.8	0.0079	15.9	2.7	1.4	1	0	0	1	1	1	1	Prefoldin	subunit
MarR_2	PF12802.2	gi|568163681|ref|YP_008947054.1|	-	0.0053	16.4	0.0	0.0069	16.0	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_IclR	PF09339.5	gi|568163681|ref|YP_008947054.1|	-	0.0053	16.3	0.0	0.0081	15.7	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
Fmp27_WPPW	PF10359.4	gi|568163681|ref|YP_008947054.1|	-	0.0066	14.9	0.6	0.0079	14.6	0.4	1.1	1	0	0	1	1	1	1	RNA	pol	II	promoter	Fmp27	protein	domain
DivIC	PF04977.10	gi|568163681|ref|YP_008947054.1|	-	0.0071	15.8	2.2	0.0095	15.4	0.3	1.9	1	1	0	2	2	2	1	Septum	formation	initiator
TPR_MLP1_2	PF07926.7	gi|568163681|ref|YP_008947054.1|	-	0.0094	15.6	0.8	0.047	13.4	0.7	1.8	2	0	0	2	2	2	1	TPR/MLP1/MLP2-like	protein
Bap31	PF05529.7	gi|568163681|ref|YP_008947054.1|	-	0.0098	15.3	0.5	0.0099	15.3	0.4	1.1	1	0	0	1	1	1	1	B-cell	receptor-associated	protein	31-like
HTH_DeoR	PF08220.7	gi|568163681|ref|YP_008947054.1|	-	0.015	14.7	0.0	0.029	13.9	0.0	1.4	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
LexA_DNA_bind	PF01726.11	gi|568163681|ref|YP_008947054.1|	-	0.017	14.6	0.0	0.04	13.4	0.0	1.6	1	1	0	1	1	1	0	LexA	DNA	binding	domain
FlaC_arch	PF05377.6	gi|568163681|ref|YP_008947054.1|	-	0.019	14.8	0.3	0.034	14.0	0.2	1.5	1	0	0	1	1	1	0	Flagella	accessory	protein	C	(FlaC)
DUF1319	PF07028.6	gi|568163681|ref|YP_008947054.1|	-	0.026	14.7	0.3	0.037	14.2	0.2	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1319)
DUF465	PF04325.8	gi|568163681|ref|YP_008947054.1|	-	0.026	14.2	0.3	0.081	12.6	0.2	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF465)
SlyX	PF04102.7	gi|568163681|ref|YP_008947054.1|	-	0.035	14.4	0.0	0.074	13.4	0.0	1.6	1	0	0	1	1	1	0	SlyX
TrmB	PF01978.14	gi|568163681|ref|YP_008947054.1|	-	0.037	13.7	0.1	0.08	12.6	0.1	1.6	1	1	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
Pox_A_type_inc	PF04508.7	gi|568163681|ref|YP_008947054.1|	-	0.05	13.4	2.0	0.43	10.4	0.1	3.0	3	0	0	3	3	3	0	Viral	A-type	inclusion	protein	repeat
HALZ	PF02183.13	gi|568163681|ref|YP_008947054.1|	-	0.059	13.0	1.2	0.099	12.3	0.1	1.9	2	0	0	2	2	2	0	Homeobox	associated	leucine	zipper
Fe_dep_repress	PF01325.14	gi|568163681|ref|YP_008947054.1|	-	0.06	13.2	0.0	0.099	12.5	0.0	1.3	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_5	PF01022.15	gi|568163681|ref|YP_008947054.1|	-	0.075	12.7	0.0	0.15	11.7	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
Rrf2	PF02082.15	gi|568163681|ref|YP_008947054.1|	-	0.079	13.0	0.0	0.14	12.2	0.0	1.5	1	1	0	1	1	1	0	Transcriptional	regulator
USP8_interact	PF08941.5	gi|568163681|ref|YP_008947054.1|	-	0.099	11.9	0.2	0.14	11.5	0.2	1.2	1	0	0	1	1	1	0	USP8	interacting
G-gamma	PF00631.17	gi|568163681|ref|YP_008947054.1|	-	0.12	12.1	0.5	0.24	11.1	0.2	1.6	1	1	0	1	1	1	0	GGL	domain
TMF_DNA_bd	PF12329.3	gi|568163681|ref|YP_008947054.1|	-	0.19	11.5	2.7	0.32	10.8	1.8	1.5	1	0	0	1	1	1	0	TATA	element	modulatory	factor	1	DNA	binding
IATP	PF04568.7	gi|568163681|ref|YP_008947054.1|	-	0.19	11.7	1.6	0.34	10.9	1.1	1.4	1	0	0	1	1	1	0	Mitochondrial	ATPase	inhibitor,	IATP
Cep57_CLD_2	PF14197.1	gi|568163681|ref|YP_008947054.1|	-	1.1	9.2	3.7	3.4	7.6	2.5	1.8	1	1	0	1	1	1	0	Centrosome	localisation	domain	of	PPC89
bZIP_1	PF00170.16	gi|568163681|ref|YP_008947054.1|	-	1.1	9.2	4.2	0.98	9.4	0.6	2.2	1	1	1	2	2	2	0	bZIP	transcription	factor
OCD_Mu_crystall	PF02423.10	gi|568163682|ref|YP_008947055.1|	-	7.7e-44	149.7	0.0	1.2e-42	145.8	0.0	1.9	1	1	0	1	1	1	1	Ornithine	cyclodeaminase/mu-crystallin	family
Shikimate_DH	PF01488.15	gi|568163682|ref|YP_008947055.1|	-	8.2e-06	25.9	0.1	1.8e-05	24.8	0.0	1.6	1	1	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
GFO_IDH_MocA	PF01408.17	gi|568163682|ref|YP_008947055.1|	-	0.0021	18.5	0.0	0.0061	17.0	0.0	1.7	1	1	1	2	2	2	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
NAD_binding_2	PF03446.10	gi|568163682|ref|YP_008947055.1|	-	0.0037	17.1	0.0	0.0059	16.4	0.0	1.4	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
IlvN	PF07991.7	gi|568163682|ref|YP_008947055.1|	-	0.0056	16.0	0.0	0.011	15.0	0.0	1.4	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
NmrA	PF05368.8	gi|568163682|ref|YP_008947055.1|	-	0.028	13.6	0.0	0.048	12.9	0.0	1.3	1	0	0	1	1	1	0	NmrA-like	family
F420_oxidored	PF03807.12	gi|568163682|ref|YP_008947055.1|	-	0.078	13.4	0.1	0.33	11.4	0.0	2.0	2	0	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
Aminotran_1_2	PF00155.16	gi|568163683|ref|YP_008947056.1|	-	4.9e-28	98.1	0.0	5.6e-28	97.9	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_MocR	PF12897.2	gi|568163683|ref|YP_008947056.1|	-	7.7e-10	37.8	0.0	1.2e-09	37.2	0.0	1.2	1	0	0	1	1	1	1	Alanine-glyoxylate	amino-transferase
DUF1126	PF06565.7	gi|568163683|ref|YP_008947056.1|	-	0.049	13.1	0.0	0.1	12.1	0.0	1.5	1	0	0	1	1	1	0	Repeat	of	unknown	function	(DUF1126)
Penicillinase_R	PF03965.11	gi|568163683|ref|YP_008947056.1|	-	0.12	12.5	0.1	0.38	10.8	0.1	1.8	1	1	1	2	2	2	0	Penicillinase	repressor
Peptidase_M24	PF00557.19	gi|568163684|ref|YP_008947057.1|	-	1.3e-54	184.9	0.2	2.3e-54	184.1	0.1	1.4	2	0	0	2	2	2	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.13	gi|568163684|ref|YP_008947057.1|	-	2.8e-19	69.9	0.0	5.6e-19	68.9	0.0	1.5	1	0	0	1	1	1	1	Creatinase/Prolidase	N-terminal	domain
Hist_deacetyl	PF00850.14	gi|568163685|ref|YP_008947058.1|	-	1.1e-62	212.0	0.0	1.4e-62	211.8	0.0	1.1	1	0	0	1	1	1	1	Histone	deacetylase	domain
PmbA_TldD	PF01523.11	gi|568163686|ref|YP_008947059.1|	-	3e-48	164.6	0.8	3.8e-48	164.2	0.5	1.1	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
PmbA_TldD	PF01523.11	gi|568163687|ref|YP_008947060.1|	-	1.2e-32	113.3	1.8	1.7e-32	112.8	1.2	1.2	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
Sm_multidrug_ex	PF06695.6	gi|568164810|ref|YP_008947061.1|	-	1.9e-09	37.6	3.5	2.9e-09	37.1	2.4	1.3	1	0	0	1	1	1	1	Putative	small	multi-drug	export	protein
Herpes_UL73	PF03554.8	gi|568164810|ref|YP_008947061.1|	-	0.17	11.7	2.0	0.13	12.0	0.5	1.6	1	1	0	1	1	1	0	UL73	viral	envelope	glycoprotein
Ald_Xan_dh_C2	PF02738.13	gi|568163688|ref|YP_008947062.1|	-	5.2e-94	315.5	0.0	3.3e-75	253.4	0.0	2.1	1	1	1	2	2	2	2	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|568163688|ref|YP_008947062.1|	-	5.3e-12	45.8	0.0	1.3e-11	44.5	0.0	1.7	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
XdhC_C	PF13478.1	gi|568163689|ref|YP_008947064.1|	-	3.3e-26	92.2	0.0	9.9e-26	90.6	0.0	1.7	2	0	0	2	2	2	1	XdhC	Rossmann	domain
Pyr_redox	PF00070.22	gi|568163689|ref|YP_008947064.1|	-	0.0003	21.1	0.3	0.49	10.8	0.0	2.4	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
2-Hacid_dh_C	PF02826.14	gi|568163689|ref|YP_008947064.1|	-	0.11	11.6	0.0	0.16	11.1	0.0	1.3	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Cas_APE2256	PF09651.5	gi|568163689|ref|YP_008947064.1|	-	0.13	12.0	0.1	0.31	10.7	0.0	1.7	1	1	0	1	1	1	0	CRISPR-associated	protein	(Cas_APE2256)
SapB_1	PF05184.10	gi|568164812|ref|YP_008947065.1|	-	0.093	12.5	1.4	0.093	12.5	1.0	2.3	2	0	0	2	2	2	0	Saposin-like	type	B,	region	1
PALP	PF00291.20	gi|568163690|ref|YP_008947066.1|	-	5.3e-58	196.6	0.0	6.2e-58	196.4	0.0	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
zinc_ribbon_5	PF13719.1	gi|568163690|ref|YP_008947066.1|	-	0.035	13.6	3.4	1.7	8.2	0.1	2.7	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|568163690|ref|YP_008947066.1|	-	0.045	13.4	2.8	3.8	7.2	0.1	2.8	2	0	0	2	2	2	0	zinc-ribbon	domain
CpXC	PF14353.1	gi|568163690|ref|YP_008947066.1|	-	0.35	10.8	1.7	0.74	9.7	0.0	2.1	1	1	1	2	2	2	0	CpXC	protein
zf-ribbon_3	PF13248.1	gi|568163690|ref|YP_008947066.1|	-	0.37	10.0	2.1	0.95	8.7	1.5	1.7	1	1	0	1	1	1	0	zinc-ribbon	domain
Zn-ribbon_8	PF09723.5	gi|568163690|ref|YP_008947066.1|	-	0.62	10.0	5.0	5.8	6.9	0.2	2.4	1	1	1	2	2	2	0	Zinc	ribbon	domain
Trypsin_2	PF13365.1	gi|568163691|ref|YP_008947067.1|	-	1.4e-17	63.7	0.6	2.3e-17	63.0	0.4	1.3	1	0	0	1	1	1	1	Trypsin-like	peptidase	domain
PDZ_2	PF13180.1	gi|568163691|ref|YP_008947067.1|	-	2.6e-14	52.8	0.2	5.3e-14	51.8	0.1	1.5	1	0	0	1	1	1	1	PDZ	domain
Trypsin	PF00089.21	gi|568163691|ref|YP_008947067.1|	-	3.5e-10	39.8	0.1	7e-10	38.8	0.0	1.5	1	1	0	1	1	1	1	Trypsin
PDZ	PF00595.19	gi|568163691|ref|YP_008947067.1|	-	3.8e-07	30.1	0.1	8.5e-07	29.0	0.1	1.7	1	0	0	1	1	1	1	PDZ	domain	(Also	known	as	DHR	or	GLGF)
Tricorn_PDZ	PF14685.1	gi|568163691|ref|YP_008947067.1|	-	0.00024	20.8	0.0	0.00061	19.5	0.0	1.8	1	0	0	1	1	1	1	Tricorn	protease	PDZ	domain
GRASP55_65	PF04495.9	gi|568163691|ref|YP_008947067.1|	-	0.0014	18.5	0.0	0.003	17.5	0.0	1.5	1	0	0	1	1	1	1	GRASP55/65	PDZ-like	domain
Peptidase_S46	PF10459.4	gi|568163691|ref|YP_008947067.1|	-	0.018	13.4	0.7	0.042	12.2	0.3	1.6	2	0	0	2	2	2	0	Peptidase	S46
Peptidase_S29	PF02907.10	gi|568163691|ref|YP_008947067.1|	-	0.085	12.3	0.1	0.24	10.9	0.0	1.7	2	0	0	2	2	2	0	Hepatitis	C	virus	NS3	protease
Peptidase_S7	PF00949.16	gi|568163691|ref|YP_008947067.1|	-	0.16	11.3	2.9	0.1	12.0	0.2	2.0	3	0	0	3	3	3	0	Peptidase	S7,	Flavivirus	NS3	serine	protease
PAP2	PF01569.16	gi|568163692|ref|YP_008947068.1|	-	2.6e-24	85.3	3.6	2.6e-24	85.3	2.5	1.8	2	0	0	2	2	2	1	PAP2	superfamily
PAP2_3	PF14378.1	gi|568163692|ref|YP_008947068.1|	-	0.0032	17.0	3.4	0.0047	16.4	0.5	2.0	2	0	0	2	2	2	1	PAP2	superfamily
PAP2_C	PF14360.1	gi|568163692|ref|YP_008947068.1|	-	0.016	15.4	2.3	0.016	15.4	1.6	2.7	3	1	0	3	3	3	0	PAP2	superfamily	C-terminal
Tic20	PF09685.5	gi|568164813|ref|YP_008947069.1|	-	0.035	14.0	2.2	0.035	14.0	1.5	2.1	2	0	0	2	2	2	0	Tic20-like	protein
DUF2542	PF10808.3	gi|568164813|ref|YP_008947069.1|	-	0.35	11.1	3.3	1.1	9.5	0.1	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2542)
DUF3592	PF12158.3	gi|568164813|ref|YP_008947069.1|	-	0.57	9.9	4.5	1.1	9.0	0.2	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3592)
DUF3188	PF11384.3	gi|568164813|ref|YP_008947069.1|	-	9	5.9	12.9	2.2	7.9	2.3	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3188)
ABC_tran	PF00005.22	gi|568163693|ref|YP_008947070.1|	-	8.2e-26	90.9	0.0	2e-25	89.6	0.0	1.6	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|568163693|ref|YP_008947070.1|	-	6.8e-11	42.6	0.1	2.4e-05	24.4	0.0	2.6	2	1	1	3	3	3	2	AAA	domain
AAA_10	PF12846.2	gi|568163693|ref|YP_008947070.1|	-	0.0083	15.5	0.5	0.049	13.0	0.0	2.1	2	0	0	2	2	2	1	AAA-like	domain
AAA_23	PF13476.1	gi|568163693|ref|YP_008947070.1|	-	0.084	13.1	1.9	0.13	12.5	1.3	1.8	1	1	0	1	1	1	0	AAA	domain
AAA_33	PF13671.1	gi|568163693|ref|YP_008947070.1|	-	0.12	12.1	0.0	1	9.2	0.0	2.2	1	1	0	1	1	1	0	AAA	domain
SRP54	PF00448.17	gi|568163693|ref|YP_008947070.1|	-	0.13	11.6	0.3	0.44	9.9	0.1	1.9	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
Aminotran_3	PF00202.16	gi|568163694|ref|YP_008947071.1|	-	3.6e-88	295.6	0.0	4.3e-88	295.4	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
Aminotran_1_2	PF00155.16	gi|568163694|ref|YP_008947071.1|	-	0.023	13.6	0.0	2.5	6.9	0.0	2.1	2	0	0	2	2	2	0	Aminotransferase	class	I	and	II
Methyltransf_11	PF08241.7	gi|568163696|ref|YP_008947073.1|	-	1.1e-16	61.1	0.3	1.4e-16	60.7	0.2	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|568163696|ref|YP_008947073.1|	-	2.8e-13	49.7	0.6	3.4e-13	49.4	0.4	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|568163696|ref|YP_008947073.1|	-	9.2e-12	44.9	0.0	1.1e-11	44.7	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|568163696|ref|YP_008947073.1|	-	9.2e-10	38.8	0.1	1.3e-09	38.4	0.1	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|568163696|ref|YP_008947073.1|	-	1.7e-09	37.9	0.2	2.8e-09	37.2	0.1	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|568163696|ref|YP_008947073.1|	-	5.8e-08	32.2	0.0	6.5e-08	32.1	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_18	PF12847.2	gi|568163696|ref|YP_008947073.1|	-	9.8e-08	32.5	0.3	1.4e-07	32.1	0.2	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|568163696|ref|YP_008947073.1|	-	3.6e-07	30.2	0.0	4.7e-07	29.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|568163696|ref|YP_008947073.1|	-	3.3e-06	26.4	0.2	3.8e-06	26.1	0.1	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
PrmA	PF06325.8	gi|568163696|ref|YP_008947073.1|	-	1.8e-05	24.0	0.2	2.3e-05	23.6	0.2	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_8	PF05148.10	gi|568163696|ref|YP_008947073.1|	-	0.00036	20.2	1.3	0.00057	19.5	0.9	1.2	1	0	0	1	1	1	1	Hypothetical	methyltransferase
NodS	PF05401.6	gi|568163696|ref|YP_008947073.1|	-	0.00063	19.1	0.3	0.00082	18.8	0.2	1.1	1	0	0	1	1	1	1	Nodulation	protein	S	(NodS)
MetW	PF07021.7	gi|568163696|ref|YP_008947073.1|	-	0.0098	15.2	0.6	0.015	14.6	0.4	1.2	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
RrnaAD	PF00398.15	gi|568163696|ref|YP_008947073.1|	-	0.026	13.5	0.0	0.051	12.6	0.0	1.4	2	0	0	2	2	2	0	Ribosomal	RNA	adenine	dimethylase
TPMT	PF05724.6	gi|568163696|ref|YP_008947073.1|	-	0.057	12.8	0.1	0.64	9.4	0.0	2.0	1	1	0	1	1	1	0	Thiopurine	S-methyltransferase	(TPMT)
FACT-Spt16_Nlob	PF14826.1	gi|568163696|ref|YP_008947073.1|	-	0.068	12.7	0.3	0.1	12.1	0.2	1.2	1	0	0	1	1	1	0	FACT	complex	subunit	SPT16	N-terminal	lobe	domain
Methyltransf_4	PF02390.12	gi|568163696|ref|YP_008947073.1|	-	0.074	12.0	0.0	0.42	9.6	0.0	1.9	2	0	0	2	2	2	0	Putative	methyltransferase
Polyketide_cyc	PF03364.15	gi|568163697|ref|YP_008947074.1|	-	0.057	13.4	0.0	0.081	12.9	0.0	1.4	1	1	0	1	1	1	0	Polyketide	cyclase	/	dehydrase	and	lipid	transport
HIT	PF01230.18	gi|568163698|ref|YP_008947075.1|	-	2.5e-23	82.4	0.0	3.2e-23	82.1	0.0	1.1	1	0	0	1	1	1	1	HIT	domain
DcpS_C	PF11969.3	gi|568163698|ref|YP_008947075.1|	-	2.8e-15	56.5	0.1	6.1e-15	55.4	0.0	1.5	2	0	0	2	2	2	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
CwfJ_C_1	PF04677.10	gi|568163698|ref|YP_008947075.1|	-	0.0024	17.5	0.0	0.0041	16.7	0.0	1.4	1	0	0	1	1	1	1	Protein	similar	to	CwfJ	C-terminus	1
FemAB	PF02388.11	gi|568163698|ref|YP_008947075.1|	-	0.011	14.4	0.0	0.014	14.0	0.0	1.1	1	0	0	1	1	1	0	FemAB	family
Acyl-CoA_dh_1	PF00441.19	gi|568163699|ref|YP_008947076.1|	-	1.5e-36	125.7	0.2	2.5e-36	125.0	0.1	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.11	gi|568163699|ref|YP_008947076.1|	-	4.3e-27	94.9	0.0	1.2e-26	93.5	0.0	1.8	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|568163699|ref|YP_008947076.1|	-	2.5e-18	65.3	0.1	5.5e-18	64.2	0.1	1.6	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.6	gi|568163699|ref|YP_008947076.1|	-	2.7e-16	60.0	0.0	4.2e-16	59.4	0.0	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
ABC_tran	PF00005.22	gi|568163700|ref|YP_008947077.1|	-	1.7e-30	106.0	0.0	1.4e-29	103.1	0.0	2.2	2	0	0	2	2	2	1	ABC	transporter
oligo_HPY	PF08352.7	gi|568163700|ref|YP_008947077.1|	-	1.7e-18	66.7	0.0	3e-18	65.9	0.0	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|568163700|ref|YP_008947077.1|	-	6.8e-13	49.2	0.8	6.6e-12	45.9	0.1	2.5	2	1	0	2	2	2	1	AAA	domain
SMC_N	PF02463.14	gi|568163700|ref|YP_008947077.1|	-	1.4e-06	27.7	0.1	9.5e-06	24.9	0.1	2.0	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_22	PF13401.1	gi|568163700|ref|YP_008947077.1|	-	1.7e-06	28.2	0.0	0.0062	16.6	0.0	2.3	2	0	0	2	2	2	2	AAA	domain
AAA_33	PF13671.1	gi|568163700|ref|YP_008947077.1|	-	2.7e-05	24.0	0.0	0.00011	22.1	0.0	1.8	2	0	0	2	2	2	1	AAA	domain
AAA_18	PF13238.1	gi|568163700|ref|YP_008947077.1|	-	0.0001	22.6	0.1	0.00033	20.9	0.0	2.0	1	0	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|568163700|ref|YP_008947077.1|	-	0.00033	20.1	0.0	0.56	9.5	0.0	2.3	2	0	0	2	2	2	2	AAA-like	domain
AAA_25	PF13481.1	gi|568163700|ref|YP_008947077.1|	-	0.0018	17.7	0.1	1.4	8.2	0.0	2.3	2	0	0	2	2	2	2	AAA	domain
AAA_17	PF13207.1	gi|568163700|ref|YP_008947077.1|	-	0.002	18.9	0.0	0.0048	17.7	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|568163700|ref|YP_008947077.1|	-	0.0044	16.1	7.4	0.088	11.8	0.3	2.9	3	0	0	3	3	3	2	AAA	ATPase	domain
SbcCD_C	PF13558.1	gi|568163700|ref|YP_008947077.1|	-	0.0054	16.6	0.0	0.019	14.9	0.0	1.9	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_13	PF13166.1	gi|568163700|ref|YP_008947077.1|	-	0.0054	15.2	0.1	0.47	8.8	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
AAA_29	PF13555.1	gi|568163700|ref|YP_008947077.1|	-	0.0058	16.1	0.1	0.011	15.2	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.1	gi|568163700|ref|YP_008947077.1|	-	0.0098	15.8	0.6	0.043	13.8	0.4	2.0	1	1	0	1	1	1	1	AAA	ATPase	domain
DUF258	PF03193.11	gi|568163700|ref|YP_008947077.1|	-	0.016	14.3	0.0	0.032	13.4	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_4	PF04326.9	gi|568163700|ref|YP_008947077.1|	-	0.025	14.7	0.7	0.37	10.9	0.0	2.4	2	0	0	2	2	2	0	Divergent	AAA	domain
NACHT	PF05729.7	gi|568163700|ref|YP_008947077.1|	-	0.029	14.0	0.6	0.11	12.1	0.1	2.0	2	0	0	2	2	2	0	NACHT	domain
MobB	PF03205.9	gi|568163700|ref|YP_008947077.1|	-	0.03	14.0	0.1	0.067	12.8	0.1	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
UPF0079	PF02367.12	gi|568163700|ref|YP_008947077.1|	-	0.037	13.6	0.1	0.072	12.7	0.1	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
T2SE	PF00437.15	gi|568163700|ref|YP_008947077.1|	-	0.04	12.8	0.1	0.067	12.0	0.1	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
NB-ARC	PF00931.17	gi|568163700|ref|YP_008947077.1|	-	0.042	12.6	0.4	0.16	10.8	0.2	1.8	2	0	0	2	2	2	0	NB-ARC	domain
Miro	PF08477.8	gi|568163700|ref|YP_008947077.1|	-	0.043	14.3	0.0	0.12	12.9	0.0	1.8	1	0	0	1	1	1	0	Miro-like	protein
Sigma54_activ_2	PF14532.1	gi|568163700|ref|YP_008947077.1|	-	0.11	12.5	0.0	4.4	7.3	0.0	2.3	2	0	0	2	2	2	0	Sigma-54	interaction	domain
IstB_IS21	PF01695.12	gi|568163700|ref|YP_008947077.1|	-	0.13	11.6	0.1	0.41	10.0	0.0	1.7	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
DEAD	PF00270.24	gi|568163700|ref|YP_008947077.1|	-	0.16	11.4	0.8	1.7	8.1	0.5	2.5	1	1	0	1	1	1	0	DEAD/DEAH	box	helicase
AAA	PF00004.24	gi|568163700|ref|YP_008947077.1|	-	0.48	10.6	2.4	2.4	8.3	0.1	2.7	2	1	1	3	3	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ABC_tran	PF00005.22	gi|568163701|ref|YP_008947078.1|	-	1.1e-24	87.3	0.0	3.1e-23	82.5	0.0	2.4	1	1	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|568163701|ref|YP_008947078.1|	-	2.6e-20	72.5	0.1	4.4e-20	71.7	0.1	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|568163701|ref|YP_008947078.1|	-	1.7e-16	61.0	0.8	2.7e-16	60.4	0.6	1.3	1	0	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|568163701|ref|YP_008947078.1|	-	3.1e-06	26.5	0.0	6.4e-05	22.2	0.0	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_25	PF13481.1	gi|568163701|ref|YP_008947078.1|	-	8.2e-06	25.3	0.9	0.0055	16.1	0.3	3.2	2	1	1	3	3	3	1	AAA	domain
AAA_15	PF13175.1	gi|568163701|ref|YP_008947078.1|	-	0.00019	20.6	4.8	0.0053	15.8	0.1	2.2	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_29	PF13555.1	gi|568163701|ref|YP_008947078.1|	-	0.00037	19.9	0.1	0.00081	18.8	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.1	gi|568163701|ref|YP_008947078.1|	-	0.0024	18.0	0.7	0.44	10.6	0.2	2.9	2	1	0	2	2	2	1	AAA	domain
PRK	PF00485.13	gi|568163701|ref|YP_008947078.1|	-	0.012	15.1	0.0	0.019	14.5	0.0	1.4	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_18	PF13238.1	gi|568163701|ref|YP_008947078.1|	-	0.022	15.0	2.1	0.096	12.9	0.0	2.4	1	1	1	2	2	2	0	AAA	domain
OSCP	PF00213.13	gi|568163701|ref|YP_008947078.1|	-	0.034	13.9	0.4	0.12	12.2	0.2	1.9	1	1	0	1	1	1	0	ATP	synthase	delta	(OSCP)	subunit
AAA_10	PF12846.2	gi|568163701|ref|YP_008947078.1|	-	0.037	13.4	1.7	0.67	9.3	1.2	2.5	1	1	0	1	1	1	0	AAA-like	domain
Mg_chelatase	PF01078.16	gi|568163701|ref|YP_008947078.1|	-	0.047	12.8	0.0	0.42	9.7	0.0	2.1	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
AAA_17	PF13207.1	gi|568163701|ref|YP_008947078.1|	-	0.067	14.0	0.8	0.26	12.1	0.6	2.2	1	1	0	1	1	1	0	AAA	domain
KaiC	PF06745.8	gi|568163701|ref|YP_008947078.1|	-	0.079	12.0	2.0	2.6	7.1	0.1	2.5	3	0	0	3	3	3	0	KaiC
SbcCD_C	PF13558.1	gi|568163701|ref|YP_008947078.1|	-	0.15	12.0	0.0	0.38	10.6	0.0	1.7	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_16	PF13191.1	gi|568163701|ref|YP_008947078.1|	-	0.16	11.9	0.5	0.37	10.7	0.3	1.8	1	1	0	1	1	1	0	AAA	ATPase	domain
ABC_ATPase	PF09818.4	gi|568163701|ref|YP_008947078.1|	-	0.22	10.0	1.4	0.96	7.9	0.1	2.4	2	1	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
BPD_transp_1	PF00528.17	gi|568163702|ref|YP_008947079.1|	-	8.6e-30	103.6	13.7	8.6e-30	103.6	9.5	2.0	2	0	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.2	gi|568163702|ref|YP_008947079.1|	-	4e-06	26.1	0.6	4e-06	26.1	0.4	2.7	4	0	0	4	4	4	1	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
BPD_transp_1	PF00528.17	gi|568163703|ref|YP_008947080.1|	-	7.7e-41	139.6	17.0	7.7e-41	139.6	11.8	2.8	2	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
SBP_bac_5	PF00496.17	gi|568163704|ref|YP_008947081.1|	-	3.7e-54	183.9	8.6	3.7e-54	183.9	5.9	1.9	2	0	0	2	2	2	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
PKD	PF00801.15	gi|568163704|ref|YP_008947081.1|	-	9.7e-09	34.8	7.5	0.00023	20.8	0.2	4.0	3	1	0	3	3	3	2	PKD	domain
DUF515	PF04415.7	gi|568163704|ref|YP_008947081.1|	-	0.013	13.7	5.9	0.046	11.9	1.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF515)
U-box	PF04564.10	gi|568163704|ref|YP_008947081.1|	-	0.067	13.1	0.0	1.2	9.1	0.0	2.3	2	0	0	2	2	2	0	U-box	domain
Pkinase	PF00069.20	gi|568164816|ref|YP_008947084.1|	-	6.6e-35	120.5	0.0	8.9e-35	120.0	0.0	1.2	1	0	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|568164816|ref|YP_008947084.1|	-	2.6e-17	62.7	0.0	5.4e-17	61.7	0.0	1.6	1	1	0	1	1	1	1	Protein	tyrosine	kinase
Kinase-like	PF14531.1	gi|568164816|ref|YP_008947084.1|	-	0.0024	16.8	0.0	0.015	14.2	0.0	1.9	1	1	0	1	1	1	1	Kinase-like
Kdo	PF06293.9	gi|568164816|ref|YP_008947084.1|	-	0.0027	16.7	0.0	0.0042	16.1	0.0	1.2	1	0	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
GTP_EFTU_D2	PF03144.20	gi|568164816|ref|YP_008947084.1|	-	0.078	13.1	2.0	1.3	9.1	0.4	3.4	2	1	1	3	3	3	0	Elongation	factor	Tu	domain	2
Nol1_Nop2_Fmu	PF01189.12	gi|568163705|ref|YP_008947085.1|	-	1.9e-36	125.8	0.0	2.5e-36	125.5	0.0	1.2	1	0	0	1	1	1	1	NOL1/NOP2/sun	family
Methyltransf_31	PF13847.1	gi|568163705|ref|YP_008947085.1|	-	4.6e-12	45.7	0.1	2e-11	43.6	0.0	2.0	2	1	0	2	2	2	1	Methyltransferase	domain
PCMT	PF01135.14	gi|568163705|ref|YP_008947085.1|	-	2.7e-08	33.6	0.0	4.5e-08	32.8	0.0	1.3	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_4	PF02390.12	gi|568163705|ref|YP_008947085.1|	-	1.5e-05	24.1	0.1	3.2e-05	23.0	0.1	1.5	1	0	0	1	1	1	1	Putative	methyltransferase
Methyltransf_25	PF13649.1	gi|568163705|ref|YP_008947085.1|	-	0.00012	22.4	0.0	0.001	19.4	0.0	2.3	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|568163705|ref|YP_008947085.1|	-	0.00015	22.2	0.1	0.0019	18.6	0.0	2.6	3	0	0	3	3	3	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|568163705|ref|YP_008947085.1|	-	0.00021	20.5	0.1	0.0017	17.4	0.0	2.1	1	1	1	2	2	2	1	ubiE/COQ5	methyltransferase	family
FtsJ	PF01728.14	gi|568163705|ref|YP_008947085.1|	-	0.00039	20.4	0.0	0.00055	19.9	0.0	1.4	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
Methyltransf_18	PF12847.2	gi|568163705|ref|YP_008947085.1|	-	0.0007	20.1	0.0	0.0016	18.9	0.0	1.7	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|568163705|ref|YP_008947085.1|	-	0.0048	16.3	0.0	0.0089	15.4	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_23	PF13489.1	gi|568163705|ref|YP_008947085.1|	-	0.013	15.1	0.0	0.028	14.1	0.0	1.5	1	0	0	1	1	1	0	Methyltransferase	domain
CMAS	PF02353.15	gi|568163705|ref|YP_008947085.1|	-	0.054	12.5	0.0	0.094	11.7	0.0	1.4	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
Fibrillarin	PF01269.12	gi|568163705|ref|YP_008947085.1|	-	0.083	11.7	0.0	0.15	10.9	0.0	1.4	1	0	0	1	1	1	0	Fibrillarin
FmrO	PF07091.6	gi|568163705|ref|YP_008947085.1|	-	0.12	11.3	0.0	0.21	10.5	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	RNA	methyltransferase	(FmrO)
Radical_SAM	PF04055.16	gi|568163706|ref|YP_008947086.1|	-	1.7e-21	77.0	0.0	3.4e-21	76.1	0.0	1.5	1	0	0	1	1	1	1	Radical	SAM	superfamily
Acetyltransf_1	PF00583.19	gi|568163706|ref|YP_008947086.1|	-	1.3e-05	25.1	0.1	4.8e-05	23.3	0.1	2.1	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|568163706|ref|YP_008947086.1|	-	0.002	18.2	0.9	0.012	15.8	0.1	2.7	2	1	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Sugar_tr	PF00083.19	gi|568163707|ref|YP_008947087.1|	-	8.2e-48	163.0	28.6	1.1e-47	162.6	19.8	1.1	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|568163707|ref|YP_008947087.1|	-	1.1e-24	86.8	32.1	1.1e-24	86.8	22.2	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
PSD5	PF07637.6	gi|568164817|ref|YP_008947088.1|	-	0.14	12.1	0.1	0.2	11.7	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1595)
Ndufs5	PF10200.4	gi|568163708|ref|YP_008947089.1|	-	0.043	13.8	0.0	0.45	10.5	0.0	2.2	1	1	0	1	1	1	0	NADH:ubiquinone	oxidoreductase,	NDUFS5-15kDa
DUF504	PF04457.7	gi|568163709|ref|YP_008947091.1|	-	5e-17	61.8	1.9	6.5e-17	61.4	1.3	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF504)
Thermopsin	PF05317.6	gi|568163710|ref|YP_008947092.1|	-	2.4e-76	256.1	22.8	2.4e-76	256.1	15.8	2.5	2	1	0	2	2	2	1	Thermopsin
CbiA	PF01656.18	gi|568164819|ref|YP_008947093.1|	-	7e-12	45.1	0.3	1.4e-11	44.1	0.2	1.6	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_31	PF13614.1	gi|568164819|ref|YP_008947093.1|	-	4.6e-07	29.9	0.4	3.2e-06	27.1	0.0	2.5	2	2	0	2	2	2	1	AAA	domain
ArsA_ATPase	PF02374.10	gi|568164819|ref|YP_008947093.1|	-	0.00017	20.7	0.7	0.00038	19.6	0.5	1.6	1	0	0	1	1	1	1	Anion-transporting	ATPase
YhjQ	PF06564.7	gi|568164819|ref|YP_008947093.1|	-	0.00091	18.6	0.3	0.0019	17.6	0.2	1.4	1	0	0	1	1	1	1	YhjQ	protein
Fer4_NifH	PF00142.13	gi|568164819|ref|YP_008947093.1|	-	0.0027	16.9	0.6	0.011	15.0	0.1	2.2	2	0	0	2	2	2	1	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
MipZ	PF09140.6	gi|568164819|ref|YP_008947093.1|	-	0.0062	15.6	0.1	0.013	14.5	0.1	1.5	1	0	0	1	1	1	1	ATPase	MipZ
VirC1	PF07015.6	gi|568164819|ref|YP_008947093.1|	-	0.033	13.2	0.1	0.072	12.1	0.0	1.4	1	0	0	1	1	1	0	VirC1	protein
BioT2	PF15368.1	gi|568164819|ref|YP_008947093.1|	-	0.12	12.1	0.0	0.2	11.4	0.0	1.3	1	0	0	1	1	1	0	Spermatogenesis	family	BioT2
AAA_25	PF13481.1	gi|568164819|ref|YP_008947093.1|	-	0.12	11.7	0.0	0.26	10.6	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
Glyco_tranf_2_3	PF13641.1	gi|568163711|ref|YP_008947094.1|	-	2.2e-33	116.0	0.0	2.8e-33	115.6	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|568163711|ref|YP_008947094.1|	-	9.7e-29	100.4	0.0	9.7e-29	100.4	0.0	2.7	3	0	0	3	3	3	1	Glycosyl	transferase	family	group	2
Glycos_transf_2	PF00535.21	gi|568163711|ref|YP_008947094.1|	-	3.7e-16	59.2	0.1	5.1e-16	58.8	0.1	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.1	gi|568163711|ref|YP_008947094.1|	-	1.1e-13	50.8	0.0	1.8e-13	50.1	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Cellulose_synt	PF03552.9	gi|568163711|ref|YP_008947094.1|	-	0.014	13.7	15.6	0.068	11.4	8.4	2.8	1	1	1	2	2	2	0	Cellulose	synthase
GYD	PF08734.6	gi|568163712|ref|YP_008947095.1|	-	1.1e-27	95.6	0.2	1.2e-27	95.4	0.2	1.0	1	0	0	1	1	1	1	GYD	domain
AsnC_trans_reg	PF01037.16	gi|568163712|ref|YP_008947095.1|	-	1.3e-05	24.8	0.1	2.3e-05	23.9	0.1	1.4	1	1	0	1	1	1	1	AsnC	family
Transcrip_reg	PF01709.15	gi|568163712|ref|YP_008947095.1|	-	0.036	13.1	0.1	0.046	12.8	0.0	1.1	1	0	0	1	1	1	0	Transcriptional	regulator
DUF3477	PF11963.3	gi|568163712|ref|YP_008947095.1|	-	0.052	12.5	0.0	0.062	12.2	0.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3477)
AMP-binding	PF00501.23	gi|568163713|ref|YP_008947097.1|	-	6.8e-80	268.4	0.0	8.4e-80	268.1	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|568163713|ref|YP_008947097.1|	-	1.1e-16	61.5	0.1	2.3e-16	60.4	0.0	1.6	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
DUF457	PF04307.9	gi|568163714|ref|YP_008947098.1|	-	1.6e-16	60.0	14.9	1.3e-15	57.0	10.3	2.6	1	1	0	1	1	1	1	Predicted	membrane-bound	metal-dependent	hydrolase	(DUF457)
DUF4184	PF13803.1	gi|568163714|ref|YP_008947098.1|	-	0.0024	17.2	0.4	0.0024	17.2	0.3	2.5	2	2	0	2	2	2	1	Domain	of	unknown	function	(DUF4184)
VirE_N	PF08800.5	gi|568163714|ref|YP_008947098.1|	-	0.12	12.1	0.0	0.18	11.5	0.0	1.2	1	0	0	1	1	1	0	VirE	N-terminal	domain
DUF1129	PF06570.6	gi|568163714|ref|YP_008947098.1|	-	1.3	8.2	5.0	2.4	7.3	3.4	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1129)
Pyridoxal_deC	PF00282.14	gi|568163715|ref|YP_008947100.1|	-	2.3e-20	72.3	0.0	3.4e-20	71.8	0.0	1.3	1	0	0	1	1	1	1	Pyridoxal-dependent	decarboxylase	conserved	domain
Aminotran_5	PF00266.14	gi|568163715|ref|YP_008947100.1|	-	5.3e-10	38.5	0.0	1.8e-09	36.8	0.0	1.8	1	1	0	1	1	1	1	Aminotransferase	class-V
Aminotran_1_2	PF00155.16	gi|568163715|ref|YP_008947100.1|	-	4.3e-08	32.4	0.0	2.3e-06	26.8	0.0	2.1	2	0	0	2	2	2	1	Aminotransferase	class	I	and	II
DegT_DnrJ_EryC1	PF01041.12	gi|568163715|ref|YP_008947100.1|	-	1.2e-05	24.5	0.0	1.7e-05	24.0	0.0	1.2	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Cys_Met_Meta_PP	PF01053.15	gi|568163715|ref|YP_008947100.1|	-	0.0023	16.2	0.0	0.0034	15.7	0.0	1.2	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Beta_elim_lyase	PF01212.16	gi|568163715|ref|YP_008947100.1|	-	0.031	13.4	0.0	0.057	12.5	0.0	1.5	1	1	0	1	1	1	0	Beta-eliminating	lyase
FGGY_N	PF00370.16	gi|568163716|ref|YP_008947101.1|	-	3.7e-40	137.7	0.0	6.1e-40	137.0	0.0	1.4	1	0	0	1	1	1	1	FGGY	family	of	carbohydrate	kinases,	N-terminal	domain
FGGY_C	PF02782.11	gi|568163716|ref|YP_008947101.1|	-	4.9e-27	94.8	0.0	7e-27	94.3	0.0	1.2	1	0	0	1	1	1	1	FGGY	family	of	carbohydrate	kinases,	C-terminal	domain
MreB_Mbl	PF06723.8	gi|568163716|ref|YP_008947101.1|	-	0.0015	17.2	0.2	0.029	12.9	0.0	2.1	2	0	0	2	2	2	1	MreB/Mbl	protein
Hydantoinase_A	PF01968.13	gi|568163716|ref|YP_008947101.1|	-	0.0032	16.6	0.1	0.54	9.3	0.1	2.5	2	1	0	2	2	2	2	Hydantoinase/oxoprolinase
DUF4445	PF14574.1	gi|568163716|ref|YP_008947101.1|	-	0.041	12.1	0.1	0.22	9.7	0.0	2.2	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4445)
MFS_1	PF07690.11	gi|568164822|ref|YP_008947102.1|	-	8.9e-33	113.4	39.6	1.2e-32	113.0	27.4	1.2	1	0	0	1	1	1	1	Major	Facilitator	Superfamily
MFS_2	PF13347.1	gi|568164822|ref|YP_008947102.1|	-	8e-09	34.3	34.5	8.1e-09	34.3	19.5	2.5	1	1	1	2	2	2	2	MFS/sugar	transport	protein
Sugar_tr	PF00083.19	gi|568164822|ref|YP_008947102.1|	-	2.6e-07	29.5	28.5	0.00025	19.7	3.8	2.7	1	1	2	3	3	3	2	Sugar	(and	other)	transporter
DUF973	PF06157.6	gi|568164823|ref|YP_008947103.1|	-	1.9e-42	145.1	37.6	3.8e-42	144.2	26.1	1.5	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
Pho86	PF11124.3	gi|568164823|ref|YP_008947103.1|	-	0.011	14.7	1.7	0.018	14.0	1.2	1.3	1	0	0	1	1	1	0	Inorganic	phosphate	transporter	Pho86
NUC205	PF08168.6	gi|568164823|ref|YP_008947103.1|	-	0.024	14.0	0.0	0.046	13.1	0.0	1.4	1	0	0	1	1	1	0	NUC205	domain
DUF2269	PF10027.4	gi|568164823|ref|YP_008947103.1|	-	0.072	12.8	0.9	0.12	12.2	0.1	1.7	2	0	0	2	2	2	0	Predicted	integral	membrane	protein	(DUF2269)
DUF1232	PF06803.7	gi|568164823|ref|YP_008947103.1|	-	0.63	9.5	7.6	0.057	12.8	1.8	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1232)
DUF3566	PF12089.3	gi|568164823|ref|YP_008947103.1|	-	0.69	9.9	8.6	0.71	9.8	1.3	2.8	3	0	0	3	3	3	0	Transmembrane	domain	of	unknown	function	(DUF3566)
DUF996	PF06195.8	gi|568164823|ref|YP_008947103.1|	-	1.5	8.7	17.8	2.2	8.2	0.7	2.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF996)
DUF4134	PF13572.1	gi|568164823|ref|YP_008947103.1|	-	1.6	8.8	9.4	5.4	7.2	5.5	2.6	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4134)
TMEM154	PF15102.1	gi|568164823|ref|YP_008947103.1|	-	2.3	7.9	6.0	0.15	11.7	0.2	1.9	1	1	1	2	2	2	0	TMEM154	protein	family
DUF3112	PF11309.3	gi|568164823|ref|YP_008947103.1|	-	3.9	7.2	8.4	0.87	9.3	1.1	2.6	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3112)
Cas_NE0113	PF09623.5	gi|568163717|ref|YP_008947107.1|	-	9.5e-13	48.1	0.0	1.4e-12	47.5	0.0	1.3	1	0	0	1	1	1	1	CRISPR-associated	protein	NE0113	(Cas_NE0113)
Cas_Cas02710	PF09670.5	gi|568163717|ref|YP_008947107.1|	-	0.001	17.8	0.0	0.0013	17.4	0.0	1.3	1	0	0	1	1	1	1	CRISPR-associated	protein	(Cas_Cas02710)
Abhydrolase_6	PF12697.2	gi|568164827|ref|YP_008947108.1|	-	1.8e-32	113.0	0.0	2.1e-32	112.8	0.0	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|568164827|ref|YP_008947108.1|	-	3.1e-14	53.0	0.1	2.2e-12	47.0	0.0	2.5	1	1	0	1	1	1	1	alpha/beta	hydrolase	fold
Abhydrolase_5	PF12695.2	gi|568164827|ref|YP_008947108.1|	-	9.2e-14	51.4	0.0	1.1e-13	51.1	0.0	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_4	PF08386.5	gi|568164827|ref|YP_008947108.1|	-	0.0013	18.5	0.0	0.0019	18.0	0.0	1.3	1	0	0	1	1	1	1	TAP-like	protein
DUF2305	PF10230.4	gi|568164827|ref|YP_008947108.1|	-	0.0022	17.4	0.1	0.0046	16.4	0.1	1.5	1	1	0	1	1	1	1	Uncharacterised	conserved	protein	(DUF2305)
Hydrolase_4	PF12146.3	gi|568164827|ref|YP_008947108.1|	-	0.0032	17.2	0.1	0.0072	16.1	0.0	1.6	1	0	0	1	1	1	1	Putative	lysophospholipase
DLH	PF01738.13	gi|568164827|ref|YP_008947108.1|	-	0.013	14.7	0.0	0.021	14.1	0.0	1.3	1	0	0	1	1	1	0	Dienelactone	hydrolase	family
Ndr	PF03096.9	gi|568164827|ref|YP_008947108.1|	-	0.12	10.8	0.0	0.25	9.7	0.0	1.6	1	1	0	1	1	1	0	Ndr	family
DUF3753	PF12575.3	gi|568164828|ref|YP_008947109.1|	-	3.6	7.4	7.1	11	5.8	0.4	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3753)
CTP_transf_1	PF01148.15	gi|568164829|ref|YP_008947110.1|	-	9.7	5.7	18.7	13	5.3	13.0	1.2	1	0	0	1	1	1	0	Cytidylyltransferase	family
Acyl-CoA_dh_N	PF02771.11	gi|568163718|ref|YP_008947111.1|	-	3.1e-23	82.4	0.0	6.5e-23	81.4	0.0	1.6	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|568163718|ref|YP_008947111.1|	-	4.5e-18	64.4	0.0	7.9e-18	63.7	0.0	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_1	PF00441.19	gi|568163718|ref|YP_008947111.1|	-	4.2e-14	52.9	0.1	1.3e-07	31.7	0.0	2.4	1	1	1	2	2	2	2	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_ox_N	PF14749.1	gi|568163718|ref|YP_008947111.1|	-	0.053	13.8	0.0	0.1	12.9	0.0	1.6	1	0	0	1	1	1	0	Acyl-coenzyme	A	oxidase	N-terminal
MaoC_dehydratas	PF01575.14	gi|568163719|ref|YP_008947112.1|	-	1e-15	57.1	0.0	1.3e-15	56.8	0.0	1.1	1	0	0	1	1	1	1	MaoC	like	domain
MaoC_dehydrat_N	PF13452.1	gi|568163719|ref|YP_008947112.1|	-	3.5e-09	36.5	0.0	4.6e-09	36.1	0.0	1.1	1	0	0	1	1	1	1	N-terminal	half	of	MaoC	dehydratase
Acyl-CoA_dh_1	PF00441.19	gi|568163720|ref|YP_008947113.1|	-	2e-09	37.7	0.0	3.3e-07	30.5	0.0	2.1	2	0	0	2	2	2	2	Acyl-CoA	dehydrogenase,	C-terminal	domain
Amidohydro_3	PF07969.6	gi|568163721|ref|YP_008947114.1|	-	7.9e-27	94.4	0.0	6.8e-26	91.4	0.0	1.9	1	1	0	2	2	2	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|568163721|ref|YP_008947114.1|	-	7.6e-15	55.6	0.0	1.1e-14	55.2	0.0	1.2	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_1	PF01979.15	gi|568163721|ref|YP_008947114.1|	-	8.9e-07	28.8	0.0	9.9e-06	25.4	0.0	2.0	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|568163721|ref|YP_008947114.1|	-	1.3e-05	24.9	0.0	4.9e-05	23.0	0.0	2.0	1	1	0	1	1	1	1	Amidohydrolase
UPF0547	PF10571.4	gi|568164830|ref|YP_008947115.1|	-	2.2e-09	36.7	1.2	3.4e-09	36.2	0.8	1.3	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
zf-ribbon_3	PF13248.1	gi|568164830|ref|YP_008947115.1|	-	5.2e-07	28.6	3.9	7.6e-07	28.1	2.7	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|568164830|ref|YP_008947115.1|	-	1.7e-05	24.1	3.4	2.4e-05	23.6	2.4	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|568164830|ref|YP_008947115.1|	-	6.7e-05	22.6	1.1	0.0001	22.0	0.8	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-dskA_traR	PF01258.12	gi|568164830|ref|YP_008947115.1|	-	0.071	12.8	1.0	0.13	12.0	0.7	1.3	1	0	0	1	1	1	0	Prokaryotic	dksA/traR	C4-type	zinc	finger
DUF4231	PF14015.1	gi|568163722|ref|YP_008947116.1|	-	1.1	9.2	4.9	1	9.3	1.6	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4231)
Tetraspannin	PF00335.15	gi|568163722|ref|YP_008947116.1|	-	9.4	5.4	11.7	1.6	7.9	5.0	1.7	1	1	1	2	2	2	0	Tetraspanin	family
DrsE	PF02635.10	gi|568163723|ref|YP_008947117.1|	-	7.5e-12	45.3	0.1	8.4e-12	45.2	0.0	1.0	1	0	0	1	1	1	1	DsrE/DsrF-like	family
COX15-CtaA	PF02628.10	gi|568163724|ref|YP_008947118.1|	-	0.00052	18.9	14.4	0.0027	16.6	6.7	2.0	1	1	1	2	2	2	2	Cytochrome	oxidase	assembly	protein
TcdA_TcdB_pore	PF12920.2	gi|568163724|ref|YP_008947118.1|	-	0.0057	14.6	0.6	0.0069	14.3	0.4	1.1	1	0	0	1	1	1	1	TcdA/TcdB	pore	forming	domain
UbiA	PF01040.13	gi|568163724|ref|YP_008947118.1|	-	0.34	10.0	12.0	0.44	9.7	8.3	1.2	1	0	0	1	1	1	0	UbiA	prenyltransferase	family
Protocadherin	PF08374.6	gi|568163724|ref|YP_008947118.1|	-	0.55	9.8	1.8	0.74	9.4	1.2	1.2	1	0	0	1	1	1	0	Protocadherin
DUF2537	PF10801.3	gi|568163724|ref|YP_008947118.1|	-	1.9	8.6	12.4	1.5	8.9	2.6	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2537)
ATP_synt_I	PF03899.10	gi|568163724|ref|YP_008947118.1|	-	3.4	7.8	13.1	4.5	7.4	8.8	1.5	1	1	0	1	1	1	0	ATP	synthase	I	chain
YfhO	PF09586.5	gi|568163724|ref|YP_008947118.1|	-	3.5	5.5	7.9	3.5	5.5	5.4	1.0	1	0	0	1	1	1	0	Bacterial	membrane	protein	YfhO
3HCDH_N	PF02737.13	gi|568163726|ref|YP_008947120.1|	-	6e-64	214.9	0.2	8e-64	214.5	0.1	1.2	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
3HCDH	PF00725.17	gi|568163726|ref|YP_008947120.1|	-	1e-46	157.2	1.1	1e-22	80.3	0.1	3.0	3	0	0	3	3	3	2	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
NAD_binding_2	PF03446.10	gi|568163726|ref|YP_008947120.1|	-	0.00079	19.3	0.0	0.0015	18.3	0.0	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.18	gi|568163726|ref|YP_008947120.1|	-	0.0013	18.4	0.8	0.0027	17.4	0.5	1.6	1	1	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
F420_oxidored	PF03807.12	gi|568163726|ref|YP_008947120.1|	-	0.0045	17.3	0.0	0.011	16.1	0.0	1.8	1	1	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
ADH_N	PF08240.7	gi|568163728|ref|YP_008947122.1|	-	1.6e-18	66.4	0.1	2.5e-18	65.8	0.1	1.3	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
NAD_binding_10	PF13460.1	gi|568163728|ref|YP_008947122.1|	-	0.002	18.1	0.0	0.0033	17.4	0.0	1.3	1	0	0	1	1	1	1	NADH(P)-binding
ADH_zinc_N	PF00107.21	gi|568163728|ref|YP_008947122.1|	-	0.0058	16.1	0.0	0.014	14.9	0.0	1.7	1	1	0	1	1	1	1	Zinc-binding	dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|568163728|ref|YP_008947122.1|	-	0.015	14.4	0.0	0.03	13.4	0.0	1.5	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Shikimate_DH	PF01488.15	gi|568163728|ref|YP_008947122.1|	-	0.018	15.1	0.0	0.19	11.7	0.0	2.5	4	0	0	4	4	4	0	Shikimate	/	quinate	5-dehydrogenase
AMP-binding	PF00501.23	gi|568163729|ref|YP_008947123.1|	-	1.2e-73	247.9	0.0	1.4e-73	247.6	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|568163729|ref|YP_008947123.1|	-	5.5e-14	52.8	0.0	1e-13	52.0	0.0	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
MaoC_dehydratas	PF01575.14	gi|568163730|ref|YP_008947124.1|	-	2.3e-15	56.0	0.0	3.4e-15	55.5	0.0	1.2	1	0	0	1	1	1	1	MaoC	like	domain
MaoC_dehydrat_N	PF13452.1	gi|568163730|ref|YP_008947124.1|	-	0.0067	16.2	0.0	0.012	15.3	0.0	1.4	2	0	0	2	2	2	1	N-terminal	half	of	MaoC	dehydratase
FabA	PF07977.8	gi|568163730|ref|YP_008947124.1|	-	0.026	14.0	0.0	0.033	13.6	0.0	1.2	1	0	0	1	1	1	0	FabA-like	domain
4HBT	PF03061.17	gi|568163730|ref|YP_008947124.1|	-	0.052	13.6	0.0	0.089	12.9	0.0	1.4	1	0	0	1	1	1	0	Thioesterase	superfamily
CoA_transf_3	PF02515.12	gi|568163731|ref|YP_008947125.1|	-	4.7e-49	166.2	0.0	6.1e-49	165.8	0.0	1.1	1	0	0	1	1	1	1	CoA-transferase	family	III
GnsAB	PF08178.6	gi|568163731|ref|YP_008947125.1|	-	0.058	13.0	3.6	3.9	7.2	0.1	2.7	2	0	0	2	2	2	0	GnsA/GnsB	family
MFS_1	PF07690.11	gi|568164831|ref|YP_008947126.1|	-	1.8e-22	79.5	53.4	1.8e-19	69.7	30.2	2.4	1	1	2	3	3	3	3	Major	Facilitator	Superfamily
Transp_cyt_pur	PF02133.10	gi|568164832|ref|YP_008947127.1|	-	0.0082	14.7	3.4	0.18	10.3	0.1	2.0	1	1	1	2	2	2	2	Permease	for	cytosine/purines,	uracil,	thiamine,	allantoin
7TMR-DISM_7TM	PF07695.6	gi|568164832|ref|YP_008947127.1|	-	0.1	12.2	3.5	0.13	11.9	2.4	1.3	1	1	0	1	1	1	0	7TM	diverse	intracellular	signalling
FeoB_C	PF07664.7	gi|568164832|ref|YP_008947127.1|	-	0.18	11.2	2.5	0.77	9.2	0.0	2.2	2	0	0	2	2	2	0	Ferrous	iron	transport	protein	B	C	terminus
DUF3040	PF11239.3	gi|568164832|ref|YP_008947127.1|	-	0.81	9.7	4.7	1.1	9.3	3.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3040)
PGPGW	PF09656.5	gi|568164832|ref|YP_008947127.1|	-	1.5	8.2	9.9	0.37	10.1	1.4	2.2	2	0	0	2	2	2	0	Putative	transmembrane	protein	(PGPGW)
DUF1056	PF06341.6	gi|568164832|ref|YP_008947127.1|	-	3.2	7.8	6.7	51	3.9	4.7	2.1	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1056)
Fe-ADH	PF00465.14	gi|568163732|ref|YP_008947128.1|	-	2.6e-45	154.6	0.0	3.5e-45	154.2	0.0	1.1	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH_2	PF13685.1	gi|568163732|ref|YP_008947128.1|	-	1.2e-08	34.6	0.0	1.6e-08	34.1	0.0	1.2	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
HTH_24	PF13412.1	gi|568163733|ref|YP_008947129.1|	-	3.9e-13	48.5	2.2	3.9e-13	48.5	1.5	2.0	2	0	0	2	2	1	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|568163733|ref|YP_008947129.1|	-	4.5e-12	45.3	0.2	1.4e-11	43.7	0.1	1.9	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
AsnC_trans_reg	PF01037.16	gi|568163733|ref|YP_008947129.1|	-	3.3e-07	29.9	0.0	5.3e-07	29.2	0.0	1.3	1	0	0	1	1	1	1	AsnC	family
HTH_20	PF12840.2	gi|568163733|ref|YP_008947129.1|	-	1.6e-06	27.7	0.0	3.3e-06	26.7	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
Sigma70_r4	PF04545.11	gi|568163733|ref|YP_008947129.1|	-	1.3e-05	24.4	0.0	8.1e-05	21.8	0.0	2.3	2	0	0	2	2	2	1	Sigma-70,	region	4
HTH_23	PF13384.1	gi|568163733|ref|YP_008947129.1|	-	1.8e-05	24.1	0.2	0.0032	17.0	0.0	3.3	3	1	1	4	4	4	1	Homeodomain-like	domain
HTH_30	PF13556.1	gi|568163733|ref|YP_008947129.1|	-	0.00029	20.3	0.0	0.0026	17.3	0.0	2.4	2	0	0	2	2	2	1	PucR	C-terminal	helix-turn-helix	domain
MarR_2	PF12802.2	gi|568163733|ref|YP_008947129.1|	-	0.0004	19.9	0.0	0.002	17.7	0.0	2.0	2	0	0	2	2	2	1	MarR	family
Sigma70_r4_2	PF08281.7	gi|568163733|ref|YP_008947129.1|	-	0.00049	19.5	0.1	0.0023	17.3	0.0	2.1	2	0	0	2	2	2	1	Sigma-70,	region	4
MarR	PF01047.17	gi|568163733|ref|YP_008947129.1|	-	0.00084	18.9	0.1	0.0031	17.1	0.0	1.8	2	0	0	2	2	2	1	MarR	family
HTH_28	PF13518.1	gi|568163733|ref|YP_008947129.1|	-	0.00098	19.0	0.2	0.029	14.3	0.0	3.0	3	1	0	3	3	3	1	Helix-turn-helix	domain
HTH_27	PF13463.1	gi|568163733|ref|YP_008947129.1|	-	0.0013	19.0	0.1	0.011	16.0	0.0	2.2	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_11	PF08279.7	gi|568163733|ref|YP_008947129.1|	-	0.0013	18.3	0.2	0.0032	17.0	0.1	1.7	1	0	0	1	1	1	1	HTH	domain
HTH_8	PF02954.14	gi|568163733|ref|YP_008947129.1|	-	0.0038	16.7	0.1	0.024	14.1	0.1	2.2	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	Fis	family
MerR	PF00376.18	gi|568163733|ref|YP_008947129.1|	-	0.0041	16.6	0.1	0.053	13.0	0.0	2.6	2	1	0	2	2	2	1	MerR	family	regulatory	protein
HTH_5	PF01022.15	gi|568163733|ref|YP_008947129.1|	-	0.0069	16.0	0.0	0.015	14.9	0.0	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_IclR	PF09339.5	gi|568163733|ref|YP_008947129.1|	-	0.0072	15.8	0.0	0.021	14.4	0.0	1.8	2	0	0	2	2	1	1	IclR	helix-turn-helix	domain
HTH_10	PF04967.7	gi|568163733|ref|YP_008947129.1|	-	0.0081	15.7	0.0	0.037	13.6	0.0	2.1	2	0	0	2	2	2	1	HTH	DNA	binding	domain
HTH_DeoR	PF08220.7	gi|568163733|ref|YP_008947129.1|	-	0.0089	15.5	0.0	0.061	12.8	0.1	2.2	2	0	0	2	2	2	1	DeoR-like	helix-turn-helix	domain
MerR_1	PF13411.1	gi|568163733|ref|YP_008947129.1|	-	0.011	15.4	0.2	0.65	9.8	0.0	3.0	3	1	0	3	3	3	0	MerR	HTH	family	regulatory	protein
DDRGK	PF09756.4	gi|568163733|ref|YP_008947129.1|	-	0.011	15.1	0.1	0.016	14.6	0.1	1.2	1	0	0	1	1	1	0	DDRGK	domain
Fe_dep_repress	PF01325.14	gi|568163733|ref|YP_008947129.1|	-	0.018	14.9	0.2	0.2	11.6	0.0	2.4	3	0	0	3	3	2	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_12	PF08461.5	gi|568163733|ref|YP_008947129.1|	-	0.028	14.1	0.9	0.27	10.9	0.3	2.3	2	1	0	2	2	2	0	Ribonuclease	R	winged-helix	domain
TrmB	PF01978.14	gi|568163733|ref|YP_008947129.1|	-	0.038	13.6	0.1	0.087	12.5	0.1	1.6	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
DUF742	PF05331.6	gi|568163733|ref|YP_008947129.1|	-	0.039	13.5	0.0	0.061	12.9	0.0	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF742)
HTH_psq	PF05225.11	gi|568163733|ref|YP_008947129.1|	-	0.056	13.0	0.0	0.29	10.7	0.0	2.1	2	0	0	2	2	2	0	helix-turn-helix,	Psq	domain
TFIIE_alpha	PF02002.12	gi|568163733|ref|YP_008947129.1|	-	0.06	12.8	0.8	0.095	12.2	0.2	1.6	2	0	0	2	2	2	0	TFIIE	alpha	subunit
Phage_CI_repr	PF07022.8	gi|568163733|ref|YP_008947129.1|	-	0.063	13.3	0.0	0.41	10.7	0.0	2.2	2	0	0	2	2	2	0	Bacteriophage	CI	repressor	helix-turn-helix	domain
RHH_3	PF12651.2	gi|568163733|ref|YP_008947129.1|	-	0.071	12.8	0.7	0.22	11.2	0.0	2.0	2	0	0	2	2	2	0	Ribbon-helix-helix	domain
HTH_38	PF13936.1	gi|568163733|ref|YP_008947129.1|	-	0.079	12.5	1.1	0.43	10.1	0.0	2.5	3	0	0	3	3	2	0	Helix-turn-helix	domain
Ribosomal_S25	PF03297.10	gi|568163733|ref|YP_008947129.1|	-	0.084	12.9	0.3	4.2	7.4	0.0	2.4	2	1	0	2	2	2	0	S25	ribosomal	protein
HTH_3	PF01381.17	gi|568163733|ref|YP_008947129.1|	-	0.1	12.4	0.6	1.2	9.0	0.0	2.8	3	0	0	3	3	3	0	Helix-turn-helix
TPP_enzyme_C	PF02775.16	gi|568163734|ref|YP_008947130.1|	-	1.3e-17	63.8	0.1	1.7e-17	63.3	0.1	1.2	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
DXP_synthase_N	PF13292.1	gi|568163734|ref|YP_008947130.1|	-	0.00032	19.7	0.1	0.0011	18.0	0.0	1.9	2	1	0	2	2	2	1	1-deoxy-D-xylulose-5-phosphate	synthase
GHMP_kinases_N	PF00288.21	gi|568163734|ref|YP_008947130.1|	-	0.013	15.5	0.4	0.025	14.6	0.3	1.3	1	0	0	1	1	1	0	GHMP	kinases	N	terminal	domain
POR_N	PF01855.14	gi|568163735|ref|YP_008947131.1|	-	7.6e-63	212.0	0.1	9.8e-63	211.7	0.1	1.1	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Transketolase_C	PF02780.15	gi|568163735|ref|YP_008947131.1|	-	8.1e-06	25.7	0.0	2.4e-05	24.2	0.0	1.7	2	0	0	2	2	2	1	Transketolase,	C-terminal	domain
TPP_enzyme_N	PF02776.13	gi|568163735|ref|YP_008947131.1|	-	0.00039	19.9	0.8	0.00066	19.1	0.5	1.4	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
Fer4_21	PF14697.1	gi|568163736|ref|YP_008947132.1|	-	1.9e-12	46.8	13.6	2.9e-12	46.2	9.4	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|568163736|ref|YP_008947132.1|	-	2e-09	36.6	19.2	1.1e-05	24.7	4.0	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|568163736|ref|YP_008947132.1|	-	2.1e-06	28.0	13.5	4e-06	27.0	9.4	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|568163736|ref|YP_008947132.1|	-	2.2e-06	27.2	13.0	0.0045	16.8	2.0	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|568163736|ref|YP_008947132.1|	-	4.4e-06	26.6	6.0	0.00067	19.6	0.5	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|568163736|ref|YP_008947132.1|	-	4.4e-06	26.8	18.2	9.1e-06	25.8	12.6	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|568163736|ref|YP_008947132.1|	-	6.1e-06	25.9	13.4	1.1e-05	25.0	9.3	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|568163736|ref|YP_008947132.1|	-	1.5e-05	25.6	10.2	0.00033	21.3	0.6	2.5	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_17	PF13534.1	gi|568163736|ref|YP_008947132.1|	-	3.3e-05	24.1	7.7	0.037	14.3	1.0	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|568163736|ref|YP_008947132.1|	-	0.007	16.7	13.1	0.097	13.1	3.7	2.8	3	0	0	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|568163736|ref|YP_008947132.1|	-	0.0076	16.6	4.9	0.0076	16.6	3.4	2.8	2	1	1	3	3	3	1	4Fe-4S	single	cluster	domain
Fer4_4	PF12800.2	gi|568163736|ref|YP_008947132.1|	-	0.017	15.4	17.8	0.21	12.0	3.4	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|568163736|ref|YP_008947132.1|	-	0.032	14.1	8.0	0.032	14.1	5.5	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|568163736|ref|YP_008947132.1|	-	0.11	13.0	16.7	0.32	11.6	2.5	2.7	2	1	1	3	3	3	0	4Fe-4S	single	cluster	domain
DEAD	PF00270.24	gi|568163737|ref|YP_008947133.1|	-	1.8e-44	151.2	0.0	7.3e-43	145.9	0.0	2.3	2	1	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|568163737|ref|YP_008947133.1|	-	2.4e-25	88.1	0.7	4.8e-25	87.2	0.1	1.8	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|568163737|ref|YP_008947133.1|	-	2.1e-09	37.4	0.0	5e-09	36.2	0.0	1.6	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
AAA_19	PF13245.1	gi|568163737|ref|YP_008947133.1|	-	7.4e-05	22.4	0.0	0.0089	15.7	0.0	2.5	2	0	0	2	2	2	1	Part	of	AAA	domain
AAA_22	PF13401.1	gi|568163737|ref|YP_008947133.1|	-	0.0058	16.7	2.5	0.13	12.4	1.8	2.8	1	1	0	1	1	1	1	AAA	domain
CMS1	PF14617.1	gi|568163737|ref|YP_008947133.1|	-	0.006	15.6	0.0	0.014	14.4	0.0	1.6	1	0	0	1	1	1	1	U3-containing	90S	pre-ribosomal	complex	subunit
Flavi_DEAD	PF07652.9	gi|568163737|ref|YP_008947133.1|	-	0.03	14.0	0.0	0.14	11.9	0.0	2.1	1	1	0	1	1	1	0	Flavivirus	DEAD	domain
DUF2075	PF09848.4	gi|568163737|ref|YP_008947133.1|	-	0.041	12.8	0.0	0.062	12.2	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
DUF137	PF02006.11	gi|568163737|ref|YP_008947133.1|	-	0.048	13.0	0.1	0.12	11.7	0.0	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	DUF137
T4SS-DNA_transf	PF02534.9	gi|568163737|ref|YP_008947133.1|	-	0.053	12.1	0.0	0.1	11.1	0.0	1.4	1	0	0	1	1	1	0	Type	IV	secretory	system	Conjugative	DNA	transfer
SecA_DEAD	PF07517.9	gi|568163737|ref|YP_008947133.1|	-	0.071	12.3	0.9	0.96	8.6	0.8	2.0	1	1	0	1	1	1	0	SecA	DEAD-like	domain
AAA_30	PF13604.1	gi|568163737|ref|YP_008947133.1|	-	0.079	12.5	0.0	0.3	10.6	0.0	1.9	2	1	0	2	2	2	0	AAA	domain
AAA_25	PF13481.1	gi|568163737|ref|YP_008947133.1|	-	0.1	11.9	0.1	0.48	9.8	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
Shikimate_DH	PF01488.15	gi|568163737|ref|YP_008947133.1|	-	0.16	12.0	0.6	7.1	6.7	0.0	3.3	4	0	0	4	4	4	0	Shikimate	/	quinate	5-dehydrogenase
DUF202	PF02656.10	gi|568163738|ref|YP_008947134.1|	-	2.6e-21	75.6	2.6	9.1e-21	73.8	0.1	2.0	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF202)
Claudin_2	PF13903.1	gi|568163738|ref|YP_008947134.1|	-	0.00014	21.5	4.2	0.00095	18.8	2.9	1.8	1	1	0	1	1	1	1	PMP-22/EMP/MP20/Claudin	tight	junction
DUF2910	PF11139.3	gi|568163738|ref|YP_008947134.1|	-	0.0045	16.1	1.2	0.0095	15.0	0.9	1.6	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF2910)
MscS_TM	PF12794.2	gi|568163738|ref|YP_008947134.1|	-	0.01	14.4	0.5	0.011	14.4	0.4	1.1	1	0	0	1	1	1	0	Mechanosensitive	ion	channel	inner	membrane	domain	1
SdpI	PF13630.1	gi|568163738|ref|YP_008947134.1|	-	0.017	14.8	8.3	0.034	13.8	1.0	2.1	1	1	0	2	2	2	0	SdpI/YhfL	protein	family
CopD	PF05425.8	gi|568163738|ref|YP_008947134.1|	-	0.02	15.1	1.7	0.047	13.8	1.2	1.7	1	1	0	1	1	1	0	Copper	resistance	protein	D
ABC2_membrane_4	PF12730.2	gi|568163738|ref|YP_008947134.1|	-	0.037	13.1	4.4	0.052	12.7	3.0	1.2	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
Connexin_CCC	PF10582.4	gi|568163738|ref|YP_008947134.1|	-	0.045	13.5	1.6	0.078	12.8	0.2	2.0	2	0	0	2	2	2	0	Gap	junction	channel	protein	cysteine-rich	domain
Cytochrom_B_N_2	PF13631.1	gi|568163738|ref|YP_008947134.1|	-	0.046	13.5	0.1	0.046	13.5	0.1	1.4	2	0	0	2	2	2	0	Cytochrome	b(N-terminal)/b6/petB
PgaD	PF13994.1	gi|568163738|ref|YP_008947134.1|	-	0.096	12.1	2.0	0.11	11.9	0.2	2.2	1	1	1	2	2	2	0	PgaD-like	protein
Tetraspannin	PF00335.15	gi|568163738|ref|YP_008947134.1|	-	0.11	11.6	6.2	1.4	8.1	4.5	2.0	1	1	0	1	1	1	0	Tetraspanin	family
DUF4064	PF13273.1	gi|568163738|ref|YP_008947134.1|	-	1.3	9.2	7.6	6.1	7.0	5.3	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4064)
YtpI	PF14007.1	gi|568163738|ref|YP_008947134.1|	-	1.6	8.7	9.9	0.13	12.1	2.0	2.0	1	1	1	2	2	2	0	YtpI-like	protein
DUF1469	PF07332.6	gi|568163738|ref|YP_008947134.1|	-	7.2	6.3	12.5	0.28	10.8	0.9	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1469)
DUF1700	PF08006.6	gi|568163738|ref|YP_008947134.1|	-	7.7	5.7	10.6	0.12	11.7	0.3	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1700)
EamA	PF00892.15	gi|568163739|ref|YP_008947135.1|	-	1.6e-21	76.6	41.1	7.5e-15	55.0	10.3	2.5	2	1	0	2	2	2	2	EamA-like	transporter	family
CytB6-F_Fe-S	PF08802.5	gi|568163739|ref|YP_008947135.1|	-	0.053	13.5	0.4	0.55	10.2	0.0	2.9	2	0	0	2	2	2	0	Cytochrome	B6-F	complex	Fe-S	subunit
EmrE	PF13536.1	gi|568163739|ref|YP_008947135.1|	-	5.7	7.1	35.8	1.2	9.3	5.3	3.3	2	1	1	3	3	3	0	Multidrug	resistance	efflux	transporter
SIS	PF01380.17	gi|568163741|ref|YP_008947137.1|	-	3.8e-15	55.6	0.6	1.2e-07	31.4	0.4	2.8	2	1	0	2	2	2	2	SIS	domain
Phage_terminase	PF10668.4	gi|568163742|ref|YP_008947138.1|	-	0.1	12.3	0.7	0.15	11.8	0.5	1.4	1	1	0	1	1	1	0	Phage	terminase	small	subunit
DUF1413	PF07205.6	gi|568163742|ref|YP_008947138.1|	-	0.11	12.1	0.1	0.13	11.8	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1413)
UvdE	PF03851.9	gi|568163743|ref|YP_008947139.1|	-	1.6e-61	207.7	0.2	1.9e-61	207.5	0.2	1.1	1	0	0	1	1	1	1	UV-endonuclease	UvdE
AP_endonuc_2	PF01261.19	gi|568163743|ref|YP_008947139.1|	-	0.031	13.5	0.0	0.062	12.5	0.0	1.5	1	0	0	1	1	1	0	Xylose	isomerase-like	TIM	barrel
Lactate_perm	PF02652.9	gi|568163744|ref|YP_008947140.1|	-	5.7e-106	355.0	36.4	8.8e-106	354.4	25.3	1.3	1	0	0	1	1	1	1	L-lactate	permease
EamA	PF00892.15	gi|568163744|ref|YP_008947140.1|	-	0.0017	18.4	9.4	0.0017	18.4	6.5	6.1	3	1	1	6	6	6	1	EamA-like	transporter	family
Aldedh	PF00171.17	gi|568163745|ref|YP_008947141.1|	-	3.2e-153	510.3	0.0	3.7e-153	510.1	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
PEPCK	PF00821.13	gi|568163746|ref|YP_008947142.1|	-	3.3e-196	652.9	0.0	3.7e-196	652.7	0.0	1.0	1	0	0	1	1	1	1	Phosphoenolpyruvate	carboxykinase
HPPK	PF01288.15	gi|568163747|ref|YP_008947143.1|	-	2.3e-32	111.3	0.0	3.5e-32	110.8	0.0	1.3	1	0	0	1	1	1	1	7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase	(HPPK)
FolB	PF02152.13	gi|568163747|ref|YP_008947143.1|	-	8.8e-31	106.4	0.3	1.5e-30	105.6	0.2	1.4	1	0	0	1	1	1	1	Dihydroneopterin	aldolase
Prefoldin	PF02996.12	gi|568163747|ref|YP_008947143.1|	-	0.045	13.3	0.1	0.11	12.1	0.1	1.7	1	0	0	1	1	1	0	Prefoldin	subunit
IF2_assoc	PF08364.6	gi|568163747|ref|YP_008947143.1|	-	6.4	6.8	7.8	21	5.2	5.4	1.8	1	1	0	1	1	1	0	Bacterial	translation	initiation	factor	IF-2	associated	region
adh_short_C2	PF13561.1	gi|568163748|ref|YP_008947144.1|	-	1.2e-14	54.6	0.0	1.5e-14	54.3	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|568163748|ref|YP_008947144.1|	-	3.5e-09	36.7	0.0	4.2e-09	36.5	0.0	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
HpaB_N	PF11794.3	gi|568163749|ref|YP_008947145.1|	-	1.8e-75	253.7	0.4	2.3e-75	253.4	0.3	1.1	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
HpaB	PF03241.8	gi|568163749|ref|YP_008947145.1|	-	4.1e-46	156.4	0.0	5.4e-46	156.0	0.0	1.2	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	C	terminal
adh_short	PF00106.20	gi|568163750|ref|YP_008947146.1|	-	2.8e-30	105.4	0.4	3.6e-30	105.0	0.3	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|568163750|ref|YP_008947146.1|	-	5.8e-30	104.8	0.2	7.1e-30	104.5	0.2	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|568163750|ref|YP_008947146.1|	-	1.5e-09	37.7	0.1	2.1e-09	37.2	0.1	1.1	1	0	0	1	1	1	1	KR	domain
F420_oxidored	PF03807.12	gi|568163750|ref|YP_008947146.1|	-	0.0036	17.7	0.6	0.02	15.3	0.1	2.2	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
YjeF_N	PF03853.10	gi|568163750|ref|YP_008947146.1|	-	0.047	13.2	0.1	0.13	11.8	0.1	1.7	2	0	0	2	2	2	0	YjeF-related	protein	N-terminus
2-Hacid_dh_C	PF02826.14	gi|568163750|ref|YP_008947146.1|	-	0.077	12.1	0.4	0.14	11.3	0.3	1.4	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Wax2_C	PF12076.3	gi|568163750|ref|YP_008947146.1|	-	0.081	12.6	0.3	0.78	9.4	0.1	2.1	2	0	0	2	2	2	0	WAX2	C-terminal	domain
GYD	PF08734.6	gi|568163750|ref|YP_008947146.1|	-	0.085	12.5	0.0	7.5	6.3	0.1	2.5	1	1	1	2	2	2	0	GYD	domain
Abhydrolase_3	PF07859.8	gi|568163751|ref|YP_008947147.1|	-	7.1e-62	208.7	0.0	8.5e-62	208.4	0.0	1.1	1	0	0	1	1	1	1	alpha/beta	hydrolase	fold
COesterase	PF00135.23	gi|568163751|ref|YP_008947147.1|	-	1.5e-06	27.1	0.0	4.5e-06	25.6	0.0	1.6	1	1	0	1	1	1	1	Carboxylesterase	family
Peptidase_S9	PF00326.16	gi|568163751|ref|YP_008947147.1|	-	0.0019	17.4	0.0	0.0029	16.8	0.0	1.5	1	1	0	1	1	1	1	Prolyl	oligopeptidase	family
Abhydrolase_5	PF12695.2	gi|568163751|ref|YP_008947147.1|	-	0.036	13.8	0.0	0.049	13.3	0.0	1.3	1	1	0	1	1	1	0	Alpha/beta	hydrolase	family
Abhydrolase_6	PF12697.2	gi|568164833|ref|YP_008947148.1|	-	5.4e-11	42.8	0.0	6.9e-11	42.4	0.0	1.2	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_5	PF12695.2	gi|568164833|ref|YP_008947148.1|	-	7.4e-05	22.5	0.0	0.0001	22.0	0.0	1.2	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|568164833|ref|YP_008947148.1|	-	0.03	13.8	0.0	0.042	13.4	0.0	1.2	1	0	0	1	1	1	0	alpha/beta	hydrolase	fold
TetR_N	PF00440.18	gi|568163752|ref|YP_008947149.1|	-	4.2e-15	55.1	0.1	7.1e-15	54.3	0.1	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	tetR	family
Luteo_PO	PF04662.8	gi|568163752|ref|YP_008947149.1|	-	0.04	13.3	0.0	0.056	12.8	0.0	1.2	1	0	0	1	1	1	0	Luteovirus	P0	protein
Acyl-CoA_dh_N	PF02771.11	gi|568163753|ref|YP_008947150.1|	-	2.8e-23	82.6	0.0	5.3e-23	81.7	0.0	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|568163753|ref|YP_008947150.1|	-	4.6e-16	58.0	0.0	8.2e-16	57.2	0.0	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_1	PF00441.19	gi|568163753|ref|YP_008947150.1|	-	1e-15	58.1	0.4	3e-14	53.3	0.3	2.2	1	1	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_ox_N	PF14749.1	gi|568163753|ref|YP_008947150.1|	-	0.084	13.1	0.0	0.15	12.3	0.0	1.4	1	0	0	1	1	1	0	Acyl-coenzyme	A	oxidase	N-terminal
ECH	PF00378.15	gi|568163754|ref|YP_008947151.1|	-	1.1e-70	237.6	0.0	1.6e-70	237.0	0.0	1.2	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
3HCDH_N	PF02737.13	gi|568163754|ref|YP_008947151.1|	-	1.5e-64	216.9	0.3	2.8e-64	216.0	0.2	1.5	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
3HCDH	PF00725.17	gi|568163754|ref|YP_008947151.1|	-	2.5e-43	146.3	0.3	2.4e-23	82.3	0.0	3.1	4	0	0	4	4	4	2	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
NAD_binding_2	PF03446.10	gi|568163754|ref|YP_008947151.1|	-	0.0002	21.2	0.0	0.00046	20.0	0.0	1.7	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
F420_oxidored	PF03807.12	gi|568163754|ref|YP_008947151.1|	-	0.0026	18.1	0.1	0.018	15.4	0.1	2.5	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_Gly3P_dh_N	PF01210.18	gi|568163754|ref|YP_008947151.1|	-	0.007	16.1	0.1	0.017	14.8	0.0	1.7	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Pyr_redox	PF00070.22	gi|568163754|ref|YP_008947151.1|	-	0.011	16.0	0.1	0.052	13.9	0.1	2.2	1	0	0	1	1	1	0	Pyridine	nucleotide-disulphide	oxidoreductase
ECH_C	PF13766.1	gi|568163754|ref|YP_008947151.1|	-	0.024	14.7	0.0	0.081	13.0	0.0	1.9	1	0	0	1	1	1	0	2-enoyl-CoA	Hydratase	C-terminal	region
SeleniumBinding	PF11524.3	gi|568163754|ref|YP_008947151.1|	-	0.032	14.3	0.1	0.58	10.3	0.0	2.8	2	0	0	2	2	2	0	Selenium	binding	protein
2-Hacid_dh_C	PF02826.14	gi|568163754|ref|YP_008947151.1|	-	0.055	12.6	0.1	0.13	11.4	0.0	1.6	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Pyr_redox_2	PF07992.9	gi|568163754|ref|YP_008947151.1|	-	0.094	12.5	0.1	0.42	10.4	0.0	2.0	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Lactamase_B	PF00753.22	gi|568163755|ref|YP_008947152.1|	-	5.1e-27	94.7	2.6	3.4e-26	92.1	1.8	2.0	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|568163755|ref|YP_008947152.1|	-	6.4e-05	22.5	0.1	9.8e-05	21.9	0.1	1.5	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|568163755|ref|YP_008947152.1|	-	0.0042	16.8	0.0	0.007	16.0	0.0	1.4	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
AMP-binding	PF00501.23	gi|568163756|ref|YP_008947153.1|	-	6.2e-70	235.6	0.0	7.8e-70	235.3	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|568163756|ref|YP_008947153.1|	-	8.4e-17	61.8	0.2	2.3e-16	60.4	0.0	1.9	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
Ribonuc_red_sm	PF00268.16	gi|568163757|ref|YP_008947154.1|	-	8.3e-12	44.6	0.1	1.2e-11	44.1	0.0	1.2	1	0	0	1	1	1	1	Ribonucleotide	reductase,	small	chain
Rubrerythrin	PF02915.12	gi|568163757|ref|YP_008947154.1|	-	2e-06	28.1	0.1	0.024	14.9	0.1	2.3	2	0	0	2	2	2	2	Rubrerythrin
Haem_oxygenas_2	PF14518.1	gi|568163757|ref|YP_008947154.1|	-	0.007	16.5	0.0	0.015	15.4	0.0	1.5	1	0	0	1	1	1	1	Iron-containing	redox	enzyme
DUF455	PF04305.9	gi|568163757|ref|YP_008947154.1|	-	0.012	14.8	0.0	2	7.6	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF455)
Acyl-CoA_dh_1	PF00441.19	gi|568163758|ref|YP_008947155.1|	-	3.4e-12	46.6	0.0	6.9e-12	45.7	0.0	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Thiolase_N	PF00108.18	gi|568163759|ref|YP_008947156.1|	-	2.5e-69	233.1	0.0	3.4e-69	232.7	0.0	1.2	1	0	0	1	1	1	1	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.13	gi|568163759|ref|YP_008947156.1|	-	1.8e-45	153.3	0.7	4.4e-45	152.0	0.3	1.8	2	0	0	2	2	2	1	Thiolase,	C-terminal	domain
ketoacyl-synt	PF00109.21	gi|568163759|ref|YP_008947156.1|	-	5.9e-06	25.9	3.2	1.4e-05	24.7	0.7	2.6	2	2	1	3	3	3	1	Beta-ketoacyl	synthase,	N-terminal	domain
SpoVAD	PF07451.6	gi|568163759|ref|YP_008947156.1|	-	0.022	13.2	0.0	0.039	12.4	0.0	1.3	1	0	0	1	1	1	0	Stage	V	sporulation	protein	AD	(SpoVAD)
ADH_N	PF08240.7	gi|568163760|ref|YP_008947157.1|	-	4.4e-25	87.5	0.0	4.1e-24	84.4	0.0	2.3	2	1	0	2	2	2	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|568163760|ref|YP_008947157.1|	-	9.7e-20	70.4	0.7	1.7e-19	69.6	0.5	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|568163760|ref|YP_008947157.1|	-	1.6e-09	38.7	0.2	4.7e-09	37.2	0.0	1.8	1	1	1	2	2	2	1	Zinc-binding	dehydrogenase
AlaDh_PNT_C	PF01262.16	gi|568163760|ref|YP_008947157.1|	-	0.0014	18.2	0.7	0.0053	16.3	0.9	1.6	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
SIS_2	PF13580.1	gi|568163760|ref|YP_008947157.1|	-	0.012	15.2	0.1	0.023	14.4	0.0	1.5	1	0	0	1	1	1	0	SIS	domain
Eno-Rase_NADH_b	PF12242.3	gi|568163760|ref|YP_008947157.1|	-	0.023	14.4	1.2	0.054	13.2	0.8	1.6	1	0	0	1	1	1	0	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
CMAS	PF02353.15	gi|568163760|ref|YP_008947157.1|	-	0.11	11.5	0.2	0.17	10.9	0.1	1.2	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
E1-N	PF14463.1	gi|568163760|ref|YP_008947157.1|	-	0.15	11.6	0.6	0.42	10.1	0.4	1.8	1	1	1	2	2	2	0	E1	N-terminal	domain
Abhydrolase_3	PF07859.8	gi|568163761|ref|YP_008947158.1|	-	2.4e-66	223.3	0.0	2.9e-66	223.0	0.0	1.1	1	0	0	1	1	1	1	alpha/beta	hydrolase	fold
COesterase	PF00135.23	gi|568163761|ref|YP_008947158.1|	-	1.2e-05	24.2	0.1	2.8e-05	23.0	0.1	1.5	1	1	0	1	1	1	1	Carboxylesterase	family
Abhydrolase_5	PF12695.2	gi|568163761|ref|YP_008947158.1|	-	2.6e-05	23.9	0.0	4.1e-05	23.3	0.0	1.3	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
DUF2424	PF10340.4	gi|568163761|ref|YP_008947158.1|	-	3e-05	22.8	0.0	4e-05	22.4	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2424)
Chlorophyllase2	PF12740.2	gi|568163761|ref|YP_008947158.1|	-	0.00041	19.3	0.0	0.00069	18.5	0.0	1.3	1	0	0	1	1	1	1	Chlorophyllase	enzyme
Chlorophyllase	PF07224.6	gi|568163761|ref|YP_008947158.1|	-	0.0026	16.6	0.0	0.0036	16.1	0.0	1.2	1	0	0	1	1	1	1	Chlorophyllase
FGGY_N	PF00370.16	gi|568163762|ref|YP_008947159.1|	-	4.4e-79	265.2	0.2	8.8e-79	264.2	0.0	1.5	2	0	0	2	2	2	1	FGGY	family	of	carbohydrate	kinases,	N-terminal	domain
FGGY_C	PF02782.11	gi|568163762|ref|YP_008947159.1|	-	2e-55	187.4	0.0	3.9e-55	186.5	0.0	1.5	2	0	0	2	2	2	1	FGGY	family	of	carbohydrate	kinases,	C-terminal	domain
BcrAD_BadFG	PF01869.15	gi|568163762|ref|YP_008947159.1|	-	0.00049	19.4	0.9	0.27	10.5	0.0	2.3	2	0	0	2	2	2	2	BadF/BadG/BcrA/BcrD	ATPase	family
Peptidase_M22	PF00814.20	gi|568163762|ref|YP_008947159.1|	-	0.05	13.1	0.0	10	5.5	0.1	2.3	2	0	0	2	2	2	0	Glycoprotease	family
DAO	PF01266.19	gi|568163763|ref|YP_008947160.1|	-	1e-52	179.2	0.0	1.2e-52	179.0	0.0	1.0	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|568163763|ref|YP_008947160.1|	-	1.7e-07	30.4	1.9	2.4e-06	26.6	1.4	2.1	1	1	0	1	1	1	1	FAD	binding	domain
FAD_binding_3	PF01494.14	gi|568163763|ref|YP_008947160.1|	-	8.8e-06	24.9	0.2	7.2e-05	21.9	0.4	2.0	2	0	0	2	2	2	1	FAD	binding	domain
NAD_binding_8	PF13450.1	gi|568163763|ref|YP_008947160.1|	-	3.7e-05	23.6	1.0	8.2e-05	22.5	0.3	1.9	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.9	gi|568163763|ref|YP_008947160.1|	-	4.7e-05	22.0	0.2	0.0001	20.9	0.1	1.5	1	0	0	1	1	1	1	HI0933-like	protein
Pyr_redox_2	PF07992.9	gi|568163763|ref|YP_008947160.1|	-	0.00013	21.9	0.1	0.00021	21.2	0.1	1.6	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_oxidored	PF12831.2	gi|568163763|ref|YP_008947160.1|	-	0.00038	19.6	0.8	0.0011	18.1	0.5	1.7	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
Pyr_redox	PF00070.22	gi|568163763|ref|YP_008947160.1|	-	0.0011	19.3	2.1	0.0022	18.3	0.4	2.3	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
ApbA	PF02558.11	gi|568163763|ref|YP_008947160.1|	-	0.01	15.2	0.1	0.019	14.3	0.1	1.5	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
NAD_binding_7	PF13241.1	gi|568163763|ref|YP_008947160.1|	-	0.014	15.5	0.1	0.44	10.8	0.1	2.8	2	1	0	2	2	2	0	Putative	NAD(P)-binding
GMC_oxred_N	PF00732.14	gi|568163763|ref|YP_008947160.1|	-	0.036	13.2	0.3	0.4	9.7	0.1	2.2	2	0	0	2	2	2	0	GMC	oxidoreductase
GIDA	PF01134.17	gi|568163763|ref|YP_008947160.1|	-	0.037	12.8	1.8	0.12	11.2	0.4	2.0	2	0	0	2	2	2	0	Glucose	inhibited	division	protein	A
Thi4	PF01946.12	gi|568163763|ref|YP_008947160.1|	-	0.043	12.9	0.3	0.2	10.6	0.0	2.1	2	0	0	2	2	2	0	Thi4	family
Pyr_redox_3	PF13738.1	gi|568163763|ref|YP_008947160.1|	-	0.06	13.4	0.0	0.16	11.9	0.0	1.7	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Trp_halogenase	PF04820.9	gi|568163763|ref|YP_008947160.1|	-	0.28	9.7	0.5	0.47	9.0	0.3	1.3	1	0	0	1	1	1	0	Tryptophan	halogenase
COXG	PF06240.8	gi|568163764|ref|YP_008947161.1|	-	1.1e-34	119.0	0.3	1.2e-34	118.9	0.2	1.0	1	0	0	1	1	1	1	Carbon	monoxide	dehydrogenase	subunit	G	(CoxG)
DUF35_N	PF12172.3	gi|568163765|ref|YP_008947162.1|	-	1e-12	47.5	0.1	2.4e-12	46.3	0.1	1.6	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF35	PF01796.12	gi|568163765|ref|YP_008947162.1|	-	1.9e-11	44.0	0.1	2.9e-11	43.4	0.1	1.3	1	0	0	1	1	1	1	DUF35	OB-fold	domain
Auto_anti-p27	PF06677.7	gi|568163765|ref|YP_008947162.1|	-	0.031	14.0	4.0	0.095	12.4	2.8	1.8	1	1	0	1	1	1	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
TrpBP	PF02081.10	gi|568163765|ref|YP_008947162.1|	-	0.14	11.6	0.1	0.26	10.7	0.1	1.4	1	0	0	1	1	1	0	Tryptophan	RNA-binding	attenuator	protein
Thiolase_N	PF00108.18	gi|568163766|ref|YP_008947163.1|	-	7.5e-17	61.1	0.4	7.1e-14	51.4	0.3	2.2	2	0	0	2	2	2	2	Thiolase,	N-terminal	domain
ketoacyl-synt	PF00109.21	gi|568163766|ref|YP_008947163.1|	-	1.3e-08	34.6	1.7	1e-06	28.4	0.1	2.8	3	0	0	3	3	3	2	Beta-ketoacyl	synthase,	N-terminal	domain
Thiolase_C	PF02803.13	gi|568163766|ref|YP_008947163.1|	-	3.9e-08	32.7	0.1	2.9e-06	26.7	0.0	2.6	2	0	0	2	2	2	1	Thiolase,	C-terminal	domain
ACP_syn_III	PF08545.5	gi|568163766|ref|YP_008947163.1|	-	7.6e-06	25.4	0.2	0.00024	20.6	0.0	2.4	2	0	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
FAE1_CUT1_RppA	PF08392.7	gi|568163766|ref|YP_008947163.1|	-	0.011	14.7	0.0	0.02	13.9	0.0	1.3	1	0	0	1	1	1	0	FAE1/Type	III	polyketide	synthase-like	protein
DUF2048	PF09752.4	gi|568163766|ref|YP_008947163.1|	-	0.04	12.7	0.0	0.1	11.4	0.0	1.6	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2048)
AMP-binding	PF00501.23	gi|568163767|ref|YP_008947164.1|	-	4.5e-85	285.5	0.0	5.4e-85	285.2	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|568163767|ref|YP_008947164.1|	-	1.5e-15	57.9	0.0	2.7e-15	57.0	0.0	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
MFS_2	PF13347.1	gi|568163767|ref|YP_008947164.1|	-	0.088	11.1	0.1	0.13	10.6	0.1	1.1	1	0	0	1	1	1	0	MFS/sugar	transport	protein
Acyl-CoA_dh_1	PF00441.19	gi|568163768|ref|YP_008947165.1|	-	1.1e-43	148.9	4.3	1.9e-43	148.1	3.0	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.11	gi|568163768|ref|YP_008947165.1|	-	3.7e-32	111.2	1.0	9.2e-32	109.9	0.2	2.1	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|568163768|ref|YP_008947165.1|	-	9.9e-21	73.0	0.1	2.2e-20	71.9	0.0	1.6	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.6	gi|568163768|ref|YP_008947165.1|	-	1.6e-19	70.4	2.7	3.3e-19	69.4	1.9	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
CcdA	PF07362.7	gi|568164834|ref|YP_008947166.1|	-	0.00048	19.9	0.2	0.00052	19.8	0.1	1.0	1	0	0	1	1	1	1	Post-segregation	antitoxin	CcdA
DUF4415	PF14384.1	gi|568164834|ref|YP_008947166.1|	-	0.021	14.9	0.1	0.022	14.9	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4415)
AhpC-TSA	PF00578.16	gi|568163769|ref|YP_008947168.1|	-	9.9e-38	128.6	0.1	1.2e-37	128.3	0.0	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|568163769|ref|YP_008947168.1|	-	7.3e-26	90.4	0.0	8.6e-26	90.2	0.0	1.0	1	0	0	1	1	1	1	Redoxin
AMP-binding	PF00501.23	gi|568163770|ref|YP_008947169.1|	-	3e-67	226.8	0.0	3.7e-67	226.5	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|568163770|ref|YP_008947169.1|	-	2.5e-17	63.5	0.0	5.1e-17	62.5	0.0	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
NurA	PF09376.5	gi|568164836|ref|YP_008947170.1|	-	0.006	16.0	0.1	0.0076	15.7	0.1	1.1	1	0	0	1	1	1	1	NurA	domain
SspH	PF08141.7	gi|568164836|ref|YP_008947170.1|	-	0.044	13.8	0.0	0.1	12.6	0.0	1.6	1	0	0	1	1	1	0	Small	acid-soluble	spore	protein	H	family
Phosphoesterase	PF04185.9	gi|568163771|ref|YP_008947172.1|	-	1.3e-71	241.8	5.1	3.5e-71	240.3	3.5	1.6	1	1	0	1	1	1	1	Phosphoesterase	family
Metallophos_2	PF12850.2	gi|568163772|ref|YP_008947173.1|	-	5.3e-10	39.3	0.0	7e-10	38.9	0.0	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|568163772|ref|YP_008947173.1|	-	7.3e-06	25.5	0.2	1.8e-05	24.2	0.2	1.6	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_3	PF14582.1	gi|568163772|ref|YP_008947173.1|	-	8.3e-05	21.8	0.2	0.00052	19.2	0.0	1.9	1	1	0	2	2	2	1	Metallophosphoesterase,	calcineurin	superfamily
Arch_ATPase	PF01637.13	gi|568163773|ref|YP_008947174.1|	-	1.1e-27	97.2	0.9	1.3e-27	97.0	0.1	1.5	2	0	0	2	2	2	1	Archaeal	ATPase
AAA_14	PF13173.1	gi|568163773|ref|YP_008947174.1|	-	1.1e-07	31.7	0.5	8.7e-06	25.6	0.0	3.1	2	2	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|568163773|ref|YP_008947174.1|	-	2e-07	31.2	0.2	7.1e-07	29.4	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|568163773|ref|YP_008947174.1|	-	4e-06	26.9	0.0	1.1e-05	25.5	0.0	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
NTPase_1	PF03266.10	gi|568163773|ref|YP_008947174.1|	-	0.0066	16.1	0.0	0.012	15.3	0.0	1.4	1	0	0	1	1	1	1	NTPase
T2SE	PF00437.15	gi|568163773|ref|YP_008947174.1|	-	0.0088	14.9	0.0	0.015	14.2	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
DUF4423	PF14394.1	gi|568163773|ref|YP_008947174.1|	-	0.034	13.7	0.0	0.058	12.9	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
DUF815	PF05673.8	gi|568163773|ref|YP_008947174.1|	-	0.05	12.5	0.1	0.097	11.5	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
AAA	PF00004.24	gi|568163773|ref|YP_008947174.1|	-	0.072	13.2	0.0	0.23	11.6	0.0	2.0	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
NACHT	PF05729.7	gi|568163773|ref|YP_008947174.1|	-	0.11	12.1	0.1	0.29	10.7	0.0	1.7	2	0	0	2	2	2	0	NACHT	domain
ECH	PF00378.15	gi|568163774|ref|YP_008947175.1|	-	6.3e-62	208.8	0.0	7.3e-62	208.6	0.0	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
Peptidase_S49	PF01343.13	gi|568163774|ref|YP_008947175.1|	-	0.031	14.0	0.0	0.12	12.1	0.0	1.9	1	1	1	2	2	2	0	Peptidase	family	S49
ATP-synt_F	PF01990.12	gi|568163774|ref|YP_008947175.1|	-	0.12	12.7	0.3	0.4	11.0	0.0	2.0	2	0	0	2	2	2	0	ATP	synthase	(F/14-kDa)	subunit
Metallophos	PF00149.23	gi|568163774|ref|YP_008947175.1|	-	0.13	11.5	0.0	3.3	7.0	0.0	2.1	1	1	0	2	2	2	0	Calcineurin-like	phosphoesterase
AMP-binding	PF00501.23	gi|568164838|ref|YP_008947176.1|	-	1.3e-79	267.5	0.0	1.7e-79	267.2	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|568164838|ref|YP_008947176.1|	-	1.7e-14	54.5	0.0	5.2e-14	52.9	0.0	1.9	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
DUF2577	PF10844.3	gi|568164838|ref|YP_008947176.1|	-	0.08	12.9	0.0	0.21	11.6	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2577)
ECH	PF00378.15	gi|568163775|ref|YP_008947177.1|	-	1.1e-67	227.6	0.0	1.7e-67	227.0	0.0	1.3	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
3HCDH_N	PF02737.13	gi|568163775|ref|YP_008947177.1|	-	5.8e-62	208.5	0.2	1.1e-61	207.5	0.1	1.5	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
3HCDH	PF00725.17	gi|568163775|ref|YP_008947177.1|	-	9.8e-45	150.9	0.1	4.2e-23	81.5	0.0	2.7	2	0	0	2	2	2	2	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
NAD_Gly3P_dh_N	PF01210.18	gi|568163775|ref|YP_008947177.1|	-	8.3e-05	22.3	0.1	0.00051	19.8	0.0	2.3	2	0	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
ECH_C	PF13766.1	gi|568163775|ref|YP_008947177.1|	-	0.0012	19.0	0.1	0.0033	17.5	0.0	1.7	1	0	0	1	1	1	1	2-enoyl-CoA	Hydratase	C-terminal	region
NAD_binding_2	PF03446.10	gi|568163775|ref|YP_008947177.1|	-	0.0018	18.1	0.0	0.0038	17.0	0.0	1.7	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_binding_7	PF13241.1	gi|568163775|ref|YP_008947177.1|	-	0.0036	17.5	0.1	0.056	13.7	0.0	2.4	2	0	0	2	2	2	1	Putative	NAD(P)-binding
Pyr_redox	PF00070.22	gi|568163775|ref|YP_008947177.1|	-	0.03	14.7	0.2	0.16	12.3	0.0	2.3	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
Trehalose_PPase	PF02358.11	gi|568163775|ref|YP_008947177.1|	-	0.038	12.8	0.0	0.064	12.1	0.0	1.3	1	0	0	1	1	1	0	Trehalose-phosphatase
F420_oxidored	PF03807.12	gi|568163775|ref|YP_008947177.1|	-	0.039	14.3	0.6	0.21	12.0	0.0	2.6	3	0	0	3	3	3	0	NADP	oxidoreductase	coenzyme	F420-dependent
ThiF	PF00899.16	gi|568163775|ref|YP_008947177.1|	-	0.13	12.0	1.2	0.54	10.0	0.8	2.0	1	1	0	1	1	1	0	ThiF	family
Sugar_tr	PF00083.19	gi|568163776|ref|YP_008947178.1|	-	7.3e-39	133.5	29.6	8.8e-39	133.3	20.5	1.0	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|568163776|ref|YP_008947178.1|	-	1.7e-26	92.7	50.6	5.9e-23	81.1	25.1	2.3	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
TPP_enzyme_N	PF02776.13	gi|568163777|ref|YP_008947179.1|	-	6.7e-44	149.3	0.0	1.4e-43	148.3	0.0	1.6	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.17	gi|568163777|ref|YP_008947179.1|	-	5.1e-34	116.9	0.0	1.3e-33	115.6	0.0	1.7	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	central	domain
TPP_enzyme_C	PF02775.16	gi|568163777|ref|YP_008947179.1|	-	6.3e-27	94.0	0.0	2.9e-25	88.6	0.0	3.1	3	1	1	4	4	4	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
Molybdopterin	PF00384.17	gi|568163777|ref|YP_008947179.1|	-	0.013	14.2	0.0	0.015	14.0	0.0	1.2	1	0	0	1	1	1	0	Molybdopterin	oxidoreductase
CENP-B_N	PF04218.8	gi|568163777|ref|YP_008947179.1|	-	0.018	14.4	0.7	0.042	13.2	0.5	1.6	1	0	0	1	1	1	0	CENP-B	N-terminal	DNA-binding	domain
VKOR	PF07884.9	gi|568163778|ref|YP_008947180.1|	-	6.4e-24	84.3	17.3	1.2e-23	83.5	12.0	1.4	1	1	0	1	1	1	1	Vitamin	K	epoxide	reductase	family
OppC_N	PF12911.2	gi|568163778|ref|YP_008947180.1|	-	0.027	13.8	3.2	3.6	7.0	0.3	2.5	2	0	0	2	2	2	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
SPW	PF03779.9	gi|568163778|ref|YP_008947180.1|	-	0.03	13.7	5.1	0.03	13.7	3.6	2.4	2	1	1	3	3	3	0	SPW	repeat
PRT_C	PF08372.5	gi|568163778|ref|YP_008947180.1|	-	0.11	11.9	1.3	0.22	11.0	0.9	1.5	1	0	0	1	1	1	0	Plant	phosphoribosyltransferase	C-terminal
Rifin_STEVOR	PF02009.11	gi|568164840|ref|YP_008947182.1|	-	5.1e-05	23.0	6.4	0.00011	22.0	4.4	1.6	1	0	0	1	1	1	1	Rifin/stevor	family
Radical_SAM	PF04055.16	gi|568163779|ref|YP_008947183.1|	-	7.5e-11	42.4	0.0	1.1e-10	41.9	0.0	1.2	1	0	0	1	1	1	1	Radical	SAM	superfamily
DUF1848	PF08902.6	gi|568163779|ref|YP_008947183.1|	-	0.013	15.0	3.6	3.8	6.9	0.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1848)
Lectin_legB	PF00139.14	gi|568163779|ref|YP_008947183.1|	-	0.083	12.2	0.0	0.12	11.6	0.0	1.1	1	0	0	1	1	1	0	Legume	lectin	domain
DUF650	PF04894.7	gi|568163780|ref|YP_008947184.1|	-	3.5e-101	338.2	0.0	4.8e-101	337.8	0.0	1.2	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF650)
DUF651	PF04895.7	gi|568163780|ref|YP_008947184.1|	-	2.1e-39	133.5	0.0	4.9e-39	132.3	0.0	1.6	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF651)
LigB	PF02900.13	gi|568164841|ref|YP_008947185.1|	-	4.1e-44	150.6	0.0	5.7e-44	150.1	0.0	1.2	1	0	0	1	1	1	1	Catalytic	LigB	subunit	of	aromatic	ring-opening	dioxygenase
Ring_hydroxyl_B	PF00866.13	gi|568163782|ref|YP_008947187.1|	-	1.9e-31	108.7	2.5	2.1e-31	108.5	1.8	1.0	1	0	0	1	1	1	1	Ring	hydroxylating	beta	subunit
Ring_hydroxyl_A	PF00848.14	gi|568164842|ref|YP_008947188.1|	-	5e-25	88.3	0.0	7.9e-25	87.7	0.0	1.2	1	0	0	1	1	1	1	Ring	hydroxylating	alpha	subunit	(catalytic	domain)
Rieske	PF00355.21	gi|568164842|ref|YP_008947188.1|	-	3.3e-22	77.8	0.0	5.6e-22	77.1	0.0	1.3	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
AMP-binding	PF00501.23	gi|568163783|ref|YP_008947189.1|	-	1.5e-96	323.3	0.0	1.9e-96	323.0	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|568163783|ref|YP_008947189.1|	-	6.8e-22	78.1	0.2	1.7e-21	76.9	0.2	1.7	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
LigA	PF07746.6	gi|568164843|ref|YP_008947190.1|	-	3.1e-06	27.0	0.0	3.7e-06	26.8	0.0	1.1	1	0	0	1	1	1	1	Aromatic-ring-opening	dioxygenase	LigAB,	LigA	subunit
Sugar_tr	PF00083.19	gi|568164844|ref|YP_008947191.1|	-	1.6e-28	99.4	42.5	1.2e-25	90.0	29.5	2.0	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|568164844|ref|YP_008947191.1|	-	1.4e-20	73.3	94.5	3.1e-16	59.0	37.9	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Rieske	PF00355.21	gi|568163784|ref|YP_008947192.1|	-	1.6e-20	72.4	0.0	2.9e-20	71.6	0.0	1.4	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Ring_hydroxyl_A	PF00848.14	gi|568163784|ref|YP_008947192.1|	-	6.9e-12	45.4	0.1	6.7e-11	42.2	0.0	2.2	1	1	0	1	1	1	1	Ring	hydroxylating	alpha	subunit	(catalytic	domain)
Ring_hydroxyl_B	PF00866.13	gi|568163785|ref|YP_008947193.1|	-	6.6e-35	119.9	0.7	8e-35	119.6	0.5	1.0	1	0	0	1	1	1	1	Ring	hydroxylating	beta	subunit
SnoaL_4	PF13577.1	gi|568163785|ref|YP_008947193.1|	-	2.1e-06	27.6	0.0	2.9e-06	27.2	0.0	1.2	1	0	0	1	1	1	1	SnoaL-like	domain
Sugar_tr	PF00083.19	gi|568164845|ref|YP_008947195.1|	-	5.9e-15	54.8	6.6	7.1e-15	54.5	4.5	1.0	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|568164845|ref|YP_008947195.1|	-	6.6e-08	31.6	15.2	1.5e-07	30.5	10.0	1.7	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
MFS_2	PF13347.1	gi|568164845|ref|YP_008947195.1|	-	0.0028	16.1	2.7	0.0033	15.8	1.9	1.2	1	0	0	1	1	1	1	MFS/sugar	transport	protein
Oxidored_q2	PF00420.19	gi|568164845|ref|YP_008947195.1|	-	0.035	13.6	1.1	0.058	12.9	0.6	1.5	1	1	0	1	1	1	0	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
TAT_signal	PF10518.4	gi|568164845|ref|YP_008947195.1|	-	0.51	10.4	0.2	0.51	10.4	0.1	4.2	5	1	0	5	5	5	0	TAT	(twin-arginine	translocation)	pathway	signal	sequence
NADH-u_ox-rdase	PF10785.4	gi|568164845|ref|YP_008947195.1|	-	0.84	9.9	3.0	0.84	9.9	0.3	2.2	1	1	2	3	3	3	0	NADH-ubiquinone	oxidoreductase	complex	I,	21	kDa	subunit
Sugar_tr	PF00083.19	gi|568164846|ref|YP_008947196.1|	-	9.1e-06	24.5	13.1	1.1e-05	24.2	9.1	1.0	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|568164846|ref|YP_008947196.1|	-	1.1e-05	24.3	32.5	5.7e-05	22.0	22.5	1.8	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
Thiolase_C	PF02803.13	gi|568163787|ref|YP_008947197.1|	-	0.00054	19.3	0.7	0.0038	16.6	0.0	2.4	3	0	0	3	3	3	1	Thiolase,	C-terminal	domain
DUF35_N	PF12172.3	gi|568163788|ref|YP_008947198.1|	-	1.1e-06	28.3	0.3	1.6e-06	27.8	0.2	1.2	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF35	PF01796.12	gi|568163788|ref|YP_008947198.1|	-	0.0014	18.8	0.0	0.0025	17.9	0.0	1.4	1	1	0	1	1	1	1	DUF35	OB-fold	domain
FdhE	PF04216.7	gi|568163788|ref|YP_008947198.1|	-	0.034	13.8	0.4	0.044	13.5	0.3	1.1	1	0	0	1	1	1	0	Protein	involved	in	formate	dehydrogenase	formation
S1-like	PF14444.1	gi|568163788|ref|YP_008947198.1|	-	0.064	12.9	0.2	0.098	12.4	0.1	1.3	1	0	0	1	1	1	0	S1-like
Bac_luciferase	PF00296.15	gi|568164847|ref|YP_008947199.1|	-	6.4e-34	117.4	0.0	9.1e-34	116.9	0.0	1.1	1	0	0	1	1	1	1	Luciferase-like	monooxygenase
Phage_AlpA	PF05930.7	gi|568164847|ref|YP_008947199.1|	-	0.092	12.4	0.0	0.19	11.4	0.0	1.4	1	0	0	1	1	1	0	Prophage	CP4-57	regulatory	protein	(AlpA)
PIN	PF01850.16	gi|568164848|ref|YP_008947200.1|	-	0.018	15.3	0.1	0.019	15.2	0.0	1.0	1	0	0	1	1	1	0	PIN	domain
E1_dh	PF00676.15	gi|568163789|ref|YP_008947202.1|	-	8e-74	248.0	0.0	3e-73	246.1	0.0	1.7	1	1	0	1	1	1	1	Dehydrogenase	E1	component
TPP_enzyme_C	PF02775.16	gi|568163789|ref|YP_008947202.1|	-	7.5e-11	41.8	0.7	2.8e-10	39.9	0.2	2.1	3	0	0	3	3	3	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
DXP_synthase_N	PF13292.1	gi|568163789|ref|YP_008947202.1|	-	7.2e-08	31.6	0.1	1.3e-07	30.8	0.1	1.3	1	0	0	1	1	1	1	1-deoxy-D-xylulose-5-phosphate	synthase
Transketolase_N	PF00456.16	gi|568163789|ref|YP_008947202.1|	-	0.00045	19.1	0.0	0.00071	18.4	0.0	1.2	1	0	0	1	1	1	1	Transketolase,	thiamine	diphosphate	binding	domain
Transketolase_C	PF02780.15	gi|568163790|ref|YP_008947203.1|	-	3.2e-36	123.9	0.1	8.2e-36	122.6	0.1	1.6	2	0	0	2	2	2	1	Transketolase,	C-terminal	domain
Transket_pyr	PF02779.19	gi|568163790|ref|YP_008947203.1|	-	2.6e-23	82.4	0.0	5.1e-23	81.4	0.0	1.5	2	0	0	2	2	2	1	Transketolase,	pyrimidine	binding	domain
Alba	PF01918.16	gi|568163790|ref|YP_008947203.1|	-	0.045	13.3	0.0	0.097	12.2	0.0	1.6	1	0	0	1	1	1	0	Alba
Rpp20	PF12328.3	gi|568163790|ref|YP_008947203.1|	-	0.049	13.2	0.0	0.092	12.3	0.0	1.4	1	0	0	1	1	1	0	Rpp20	subunit	of	nuclear	RNase	MRP	and	P
POR_N	PF01855.14	gi|568163790|ref|YP_008947203.1|	-	0.08	12.4	0.0	0.14	11.6	0.0	1.3	1	0	0	1	1	1	0	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
FCD	PF07729.7	gi|568163791|ref|YP_008947204.1|	-	6.3e-31	107.3	2.0	8e-31	106.9	1.4	1.1	1	0	0	1	1	1	1	FCD	domain
GntR	PF00392.16	gi|568163791|ref|YP_008947204.1|	-	2.5e-11	42.8	1.5	7.8e-11	41.2	0.0	2.6	3	1	0	3	3	2	1	Bacterial	regulatory	proteins,	gntR	family
HTH_11	PF08279.7	gi|568163791|ref|YP_008947204.1|	-	0.00011	21.7	0.0	0.00044	19.8	0.0	2.0	1	0	0	1	1	1	1	HTH	domain
HTH_20	PF12840.2	gi|568163791|ref|YP_008947204.1|	-	0.00073	19.2	0.0	0.0045	16.7	0.0	2.3	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|568163791|ref|YP_008947204.1|	-	0.00074	18.8	0.5	0.0044	16.3	0.0	2.4	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_Crp_2	PF13545.1	gi|568163791|ref|YP_008947204.1|	-	0.0016	18.1	0.5	0.0059	16.3	0.0	2.2	2	1	0	2	2	2	1	Crp-like	helix-turn-helix	domain
TrmB	PF01978.14	gi|568163791|ref|YP_008947204.1|	-	0.0037	16.9	0.2	0.015	14.9	0.0	2.1	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
TFR_dimer	PF04253.10	gi|568163791|ref|YP_008947204.1|	-	0.005	16.4	0.4	0.0086	15.6	0.3	1.3	1	0	0	1	1	1	1	Transferrin	receptor-like	dimerisation	domain
HTH_36	PF13730.1	gi|568163791|ref|YP_008947204.1|	-	0.0056	16.7	0.0	0.024	14.7	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
PaaX	PF07848.7	gi|568163791|ref|YP_008947204.1|	-	0.0057	16.6	0.0	0.012	15.6	0.0	1.5	1	0	0	1	1	1	1	PaaX-like	protein
HTH_5	PF01022.15	gi|568163791|ref|YP_008947204.1|	-	0.0072	15.9	0.0	0.025	14.2	0.0	2.0	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_38	PF13936.1	gi|568163791|ref|YP_008947204.1|	-	0.012	15.1	0.3	0.7	9.4	0.2	2.7	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_DeoR	PF08220.7	gi|568163791|ref|YP_008947204.1|	-	0.014	14.9	0.2	0.1	12.1	0.0	2.4	2	0	0	2	2	2	0	DeoR-like	helix-turn-helix	domain
HTH_41	PF14502.1	gi|568163791|ref|YP_008947204.1|	-	0.017	14.7	0.0	0.041	13.5	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|568163791|ref|YP_008947204.1|	-	0.024	14.5	0.0	0.19	11.7	0.0	2.5	3	0	0	3	3	2	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
MarR	PF01047.17	gi|568163791|ref|YP_008947204.1|	-	0.024	14.3	0.0	0.071	12.8	0.0	1.8	1	0	0	1	1	1	0	MarR	family
Phage_rep_org_N	PF09681.5	gi|568163791|ref|YP_008947204.1|	-	0.029	13.9	0.0	0.068	12.7	0.0	1.6	1	0	0	1	1	1	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
DUF4423	PF14394.1	gi|568163791|ref|YP_008947204.1|	-	0.029	13.8	1.7	0.91	9.0	0.1	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4423)
DUF2525	PF10733.4	gi|568163791|ref|YP_008947204.1|	-	0.036	13.8	0.2	0.095	12.5	0.2	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2525)
HTH_23	PF13384.1	gi|568163791|ref|YP_008947204.1|	-	0.05	13.2	0.0	0.78	9.4	0.0	2.7	2	0	0	2	2	2	0	Homeodomain-like	domain
HTH_28	PF13518.1	gi|568163791|ref|YP_008947204.1|	-	0.058	13.4	0.0	0.28	11.2	0.0	2.1	2	0	0	2	2	2	0	Helix-turn-helix	domain
AKAP7_NLS	PF10469.4	gi|568163791|ref|YP_008947204.1|	-	0.062	13.0	0.3	0.12	12.0	0.1	1.5	1	1	0	1	1	1	0	AKAP7	2'5'	RNA	ligase-like	domain
RPA_C	PF08784.6	gi|568163791|ref|YP_008947204.1|	-	0.062	13.7	0.0	0.18	12.2	0.0	1.7	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
HTH_8	PF02954.14	gi|568163791|ref|YP_008947204.1|	-	0.063	12.8	0.1	0.48	10.0	0.0	2.2	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	Fis	family
DUF4174	PF13778.1	gi|568163791|ref|YP_008947204.1|	-	0.064	13.3	0.6	0.23	11.5	0.1	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4174)
Rrf2	PF02082.15	gi|568163791|ref|YP_008947204.1|	-	0.065	13.3	0.0	0.2	11.7	0.0	1.8	1	0	0	1	1	1	0	Transcriptional	regulator
OmpH	PF03938.9	gi|568163791|ref|YP_008947204.1|	-	0.088	12.7	0.3	0.12	12.3	0.2	1.4	1	1	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
HSCB_C	PF07743.8	gi|568163791|ref|YP_008947204.1|	-	0.35	11.3	4.0	0.3	11.5	0.7	2.2	2	0	0	2	2	2	0	HSCB	C-terminal	oligomerisation	domain
DUF2115	PF09888.4	gi|568163791|ref|YP_008947204.1|	-	1.6	8.8	4.8	16	5.5	0.7	2.1	1	1	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2115)
2-Hacid_dh_C	PF02826.14	gi|568163792|ref|YP_008947205.1|	-	8e-66	220.5	0.0	1.1e-65	220.0	0.0	1.2	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.25	gi|568163792|ref|YP_008947205.1|	-	1.4e-21	76.3	0.0	1.7e-21	76.0	0.0	1.0	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
NAD_binding_2	PF03446.10	gi|568163792|ref|YP_008947205.1|	-	5.2e-09	36.1	0.2	1.4e-07	31.5	0.0	2.1	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
PIG-L	PF02585.12	gi|568163793|ref|YP_008947206.1|	-	6.1e-21	75.2	0.0	8.4e-21	74.8	0.0	1.2	1	0	0	1	1	1	1	GlcNAc-PI	de-N-acetylase
GIIM	PF08388.6	gi|568163793|ref|YP_008947206.1|	-	0.32	10.8	1.6	0.63	9.8	0.3	2.0	2	0	0	2	2	2	0	Group	II	intron,	maturase-specific	domain
Methyltransf_6	PF03737.10	gi|568163794|ref|YP_008947207.1|	-	4.9e-32	110.9	0.9	6.2e-32	110.5	0.6	1.1	1	0	0	1	1	1	1	Demethylmenaquinone	methyltransferase
Yqai	PF09466.5	gi|568163794|ref|YP_008947207.1|	-	0.09	12.7	0.1	0.25	11.3	0.1	1.7	1	0	0	1	1	1	0	Hypothetical	protein	Yqai
Ald_Xan_dh_C2	PF02738.13	gi|568163795|ref|YP_008947208.1|	-	4.8e-100	335.4	0.7	8.4e-80	268.6	0.0	2.0	1	1	1	2	2	2	2	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|568163795|ref|YP_008947208.1|	-	5.2e-18	65.1	0.0	1.1e-17	64.0	0.0	1.6	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
Peptidase_S8	PF00082.17	gi|568163796|ref|YP_008947209.1|	-	2.4e-12	46.5	0.4	9.2e-12	44.6	0.1	2.1	2	0	0	2	2	2	1	Subtilase	family
Pro-kuma_activ	PF09286.6	gi|568163796|ref|YP_008947209.1|	-	2.4e-11	43.8	0.1	1.9e-10	40.9	0.0	2.3	2	0	0	2	2	2	1	Pro-kumamolisin,	activation	domain
A2M_N	PF01835.14	gi|568163796|ref|YP_008947209.1|	-	0.00066	19.8	0.3	1.5	9.0	0.0	4.3	5	0	0	5	5	5	2	MG2	domain
FlgD_ig	PF13860.1	gi|568163796|ref|YP_008947209.1|	-	0.0036	16.9	0.9	1	9.1	0.0	4.4	5	0	0	5	5	5	1	FlgD	Ig-like	domain
PNGaseA	PF12222.3	gi|568163797|ref|YP_008947210.1|	-	8.6e-133	443.3	14.0	1.2e-132	442.8	9.7	1.1	1	0	0	1	1	1	1	Peptide	N-acetyl-beta-D-glucosaminyl	asparaginase	amidase	A
AMP-binding	PF00501.23	gi|568163798|ref|YP_008947211.1|	-	5.9e-74	248.9	0.0	7.6e-74	248.5	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|568163798|ref|YP_008947211.1|	-	6.2e-22	78.3	0.3	1.2e-21	77.4	0.2	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
tRNA_edit	PF04073.10	gi|568163799|ref|YP_008947212.1|	-	4.9e-27	94.2	0.0	5.8e-27	93.9	0.0	1.1	1	0	0	1	1	1	1	Aminoacyl-tRNA	editing	domain
RRF	PF01765.14	gi|568164850|ref|YP_008947213.1|	-	0.014	14.8	1.9	0.016	14.7	1.3	1.0	1	0	0	1	1	1	0	Ribosome	recycling	factor
CorA	PF01544.13	gi|568164850|ref|YP_008947213.1|	-	0.015	14.3	4.2	0.089	11.8	0.9	2.0	1	1	1	2	2	2	0	CorA-like	Mg2+	transporter	protein
Syntaxin	PF00804.20	gi|568164850|ref|YP_008947213.1|	-	0.019	15.1	0.7	0.022	14.9	0.5	1.1	1	0	0	1	1	1	0	Syntaxin
GvpK	PF05121.7	gi|568164850|ref|YP_008947213.1|	-	0.023	14.5	2.1	0.026	14.3	1.4	1.2	1	0	0	1	1	1	0	Gas	vesicle	protein	K
DUF3391	PF11871.3	gi|568164850|ref|YP_008947213.1|	-	0.054	13.6	0.0	0.061	13.5	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3391)
DUF552	PF04472.7	gi|568164850|ref|YP_008947213.1|	-	0.059	13.2	0.6	3.2	7.7	0.0	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF552)
AcylCoA_dehyd_C	PF12186.3	gi|568164850|ref|YP_008947213.1|	-	0.077	12.8	0.3	0.099	12.5	0.2	1.2	1	1	0	1	1	1	0	Acyl-CoA	dehydrogenase	C	terminal
Sec34	PF04136.10	gi|568164850|ref|YP_008947213.1|	-	0.078	12.6	0.4	0.094	12.4	0.2	1.3	1	1	0	1	1	1	0	Sec34-like	family
IncA	PF04156.9	gi|568164850|ref|YP_008947213.1|	-	0.088	12.4	0.9	0.092	12.3	0.6	1.0	1	0	0	1	1	1	0	IncA	protein
LemA	PF04011.7	gi|568164850|ref|YP_008947213.1|	-	0.093	11.8	0.1	0.093	11.8	0.1	1.0	1	0	0	1	1	1	0	LemA	family
DUF4279	PF14106.1	gi|568164850|ref|YP_008947213.1|	-	0.094	12.5	4.5	2.3	8.1	0.2	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4279)
DUF2935	PF11155.3	gi|568164850|ref|YP_008947213.1|	-	0.098	12.7	0.0	0.11	12.5	0.0	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF2935)
DUF1342	PF07072.6	gi|568164850|ref|YP_008947213.1|	-	0.13	11.8	0.9	0.14	11.7	0.6	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1342)
Baculo_PEP_C	PF04513.7	gi|568164850|ref|YP_008947213.1|	-	0.15	11.9	0.1	0.16	11.8	0.1	1.1	1	0	0	1	1	1	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
LXG	PF04740.7	gi|568164850|ref|YP_008947213.1|	-	0.15	11.8	0.9	0.15	11.7	0.6	1.2	1	0	0	1	1	1	0	LXG	domain	of	WXG	superfamily
DUF1664	PF07889.7	gi|568164850|ref|YP_008947213.1|	-	0.17	11.6	2.8	0.22	11.3	2.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
YtxH	PF12732.2	gi|568164850|ref|YP_008947213.1|	-	0.17	12.2	1.2	0.18	12.1	0.8	1.2	1	1	0	1	1	1	0	YtxH-like	protein
DUF4631	PF15450.1	gi|568164850|ref|YP_008947213.1|	-	0.19	9.9	1.3	0.19	9.9	0.9	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4631)
DegS	PF05384.6	gi|568164850|ref|YP_008947213.1|	-	0.21	10.7	1.8	0.25	10.5	0.7	1.5	1	1	0	1	1	1	0	Sensor	protein	DegS
MIP-T3	PF10243.4	gi|568164850|ref|YP_008947213.1|	-	0.25	9.7	1.5	0.27	9.6	1.0	1.0	1	0	0	1	1	1	0	Microtubule-binding	protein	MIP-T3
Orthopox_A5L	PF06193.6	gi|568164850|ref|YP_008947213.1|	-	0.3	10.9	2.4	0.31	10.9	1.6	1.1	1	0	0	1	1	1	0	Orthopoxvirus	A5L	protein-like
HisKA	PF00512.20	gi|568164850|ref|YP_008947213.1|	-	0.39	10.7	3.1	0.3	11.1	0.8	1.7	1	1	1	2	2	2	0	His	Kinase	A	(phospho-acceptor)	domain
DUF2200	PF09966.4	gi|568164850|ref|YP_008947213.1|	-	0.5	10.2	3.0	0.48	10.3	1.0	1.7	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2200)
Adaptin_binding	PF10199.4	gi|568164850|ref|YP_008947213.1|	-	0.64	10.2	3.5	1.4	9.1	2.4	1.6	1	1	0	1	1	1	0	Alpha	and	gamma	adaptin	binding	protein	p34
FlaC_arch	PF05377.6	gi|568164850|ref|YP_008947213.1|	-	0.85	9.5	3.1	0.87	9.5	1.0	1.7	2	0	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
zf-C4H2	PF10146.4	gi|568164850|ref|YP_008947213.1|	-	2.3	8.1	4.1	2.3	8.1	2.8	1.0	1	0	0	1	1	1	0	Zinc	finger-containing	protein
Snf7	PF03357.16	gi|568164850|ref|YP_008947213.1|	-	2.5	7.4	6.2	3.3	7.0	4.3	1.3	1	1	0	1	1	1	0	Snf7
Osmo_CC	PF08946.5	gi|568164850|ref|YP_008947213.1|	-	3.5	7.7	9.0	1	9.4	4.1	1.7	1	1	1	2	2	2	0	Osmosensory	transporter	coiled	coil
DUF3375	PF11855.3	gi|568164850|ref|YP_008947213.1|	-	8.3	5.0	7.2	8.7	4.9	5.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3375)
GATase	PF00117.23	gi|568163800|ref|YP_008947214.1|	-	2.8e-19	69.3	0.0	3.9e-19	68.8	0.0	1.1	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|568163800|ref|YP_008947214.1|	-	8.1e-05	22.1	0.1	0.00024	20.5	0.1	1.8	2	1	0	2	2	2	1	Peptidase	C26
HTS	PF04204.11	gi|568163800|ref|YP_008947214.1|	-	0.032	12.9	0.0	0.041	12.5	0.0	1.3	1	1	0	1	1	1	0	Homoserine	O-succinyltransferase
ADC	PF06314.6	gi|568163801|ref|YP_008947215.1|	-	1.2e-56	191.6	0.0	1.5e-56	191.3	0.0	1.0	1	0	0	1	1	1	1	Acetoacetate	decarboxylase	(ADC)
Methyltransf_24	PF13578.1	gi|568163802|ref|YP_008947216.1|	-	7.4e-14	52.4	0.0	1e-13	52.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_3	PF01596.12	gi|568163802|ref|YP_008947216.1|	-	1.6e-07	30.6	0.0	1.9e-07	30.3	0.0	1.1	1	0	0	1	1	1	1	O-methyltransferase
CmcI	PF04989.7	gi|568163802|ref|YP_008947216.1|	-	3.3e-07	29.8	0.0	4.8e-07	29.2	0.0	1.2	1	0	0	1	1	1	1	Cephalosporin	hydroxylase
TylF	PF05711.6	gi|568163802|ref|YP_008947216.1|	-	0.00013	21.1	0.0	0.00023	20.3	0.0	1.4	1	1	0	1	1	1	1	Macrocin-O-methyltransferase	(TylF)
CactinC_cactus	PF09732.4	gi|568163803|ref|YP_008947217.1|	-	0.035	13.7	0.3	0.092	12.3	0.2	1.7	1	0	0	1	1	1	0	Cactus-binding	C-terminus	of	cactin	protein
Glyco_hydro_31	PF01055.21	gi|568163804|ref|YP_008947218.1|	-	1.7e-133	445.7	1.8	2.1e-133	445.3	1.3	1.1	1	0	0	1	1	1	1	Glycosyl	hydrolases	family	31
Gal_mutarotas_2	PF13802.1	gi|568163804|ref|YP_008947218.1|	-	1.9e-16	59.6	0.1	5.5e-16	58.1	0.1	1.9	1	0	0	1	1	1	1	Galactose	mutarotase-like
Retrotrans_gag	PF03732.12	gi|568163804|ref|YP_008947218.1|	-	0.063	13.3	0.1	0.15	12.1	0.0	1.6	1	0	0	1	1	1	0	Retrotransposon	gag	protein
NMO	PF03060.10	gi|568163804|ref|YP_008947218.1|	-	0.085	11.9	0.0	0.15	11.1	0.0	1.3	1	0	0	1	1	1	0	Nitronate	monooxygenase
Regulator_TrmB	PF11495.3	gi|568164851|ref|YP_008947219.1|	-	4.4e-64	215.6	1.9	5.3e-64	215.3	1.3	1.1	1	0	0	1	1	1	1	Archaeal	transcriptional	regulator	TrmB
TrmB	PF01978.14	gi|568164851|ref|YP_008947219.1|	-	1.5e-13	50.2	0.2	3.6e-13	49.0	0.1	1.7	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.17	gi|568164851|ref|YP_008947219.1|	-	0.031	13.9	0.0	0.057	13.1	0.0	1.4	1	0	0	1	1	1	0	MarR	family
Glyco_hydro_57	PF03065.10	gi|568163805|ref|YP_008947220.1|	-	1.7e-45	155.4	5.1	4.8e-45	154.0	3.6	1.7	1	1	0	1	1	1	1	Glycosyl	hydrolase	family	57
S1FA	PF04689.8	gi|568163805|ref|YP_008947220.1|	-	0.36	10.7	1.7	0.77	9.6	0.0	2.3	2	0	0	2	2	2	0	DNA	binding	protein	S1FA
BPD_transp_1	PF00528.17	gi|568163806|ref|YP_008947221.1|	-	1.6e-14	53.8	24.2	1.6e-14	53.8	16.8	2.2	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.17	gi|568163807|ref|YP_008947222.1|	-	5.3e-16	58.6	22.8	5.3e-16	58.6	15.8	2.2	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
SoxE	PF06525.6	gi|568163808|ref|YP_008947223.1|	-	4.8e-05	22.7	8.9	4.8e-05	22.7	6.2	2.1	2	0	0	2	2	2	1	Sulfocyanin	(SoxE)
DUF1510	PF07423.6	gi|568163808|ref|YP_008947223.1|	-	0.0008	18.8	0.0	0.0012	18.2	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1510)
SpoIIIAH	PF12685.2	gi|568163808|ref|YP_008947223.1|	-	0.015	14.7	0.3	0.03	13.8	0.2	1.5	1	0	0	1	1	1	0	SpoIIIAH-like	protein
SP_C-Propep	PF08999.5	gi|568163808|ref|YP_008947223.1|	-	0.016	14.7	0.4	0.029	13.8	0.3	1.4	1	0	0	1	1	1	0	Surfactant	protein	C,	N	terminal	propeptide
PLDc_N	PF13396.1	gi|568163808|ref|YP_008947223.1|	-	0.22	11.2	3.4	0.085	12.5	0.5	1.7	2	0	0	2	2	2	0	Phospholipase_D-nuclease	N-terminal
Shisa	PF13908.1	gi|568163808|ref|YP_008947223.1|	-	1.5	8.9	4.9	0.19	11.9	0.4	1.6	2	0	0	2	2	2	0	Wnt	and	FGF	inhibitory	regulator
Sporozoite_P67	PF05642.6	gi|568163808|ref|YP_008947223.1|	-	2.4	5.8	9.9	3.7	5.3	6.8	1.2	1	0	0	1	1	1	0	Sporozoite	P67	surface	antigen
Phosphoprotein	PF00922.12	gi|568163808|ref|YP_008947223.1|	-	8	5.5	10.6	14	4.7	7.3	1.3	1	0	0	1	1	1	0	Vesiculovirus	phosphoprotein
ABC_tran	PF00005.22	gi|568163809|ref|YP_008947224.1|	-	2.1e-33	115.4	0.0	4.3e-33	114.5	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|568163809|ref|YP_008947224.1|	-	1.3e-08	35.1	0.0	0.00016	21.7	0.0	2.4	1	1	1	2	2	2	2	AAA	domain
TOBE_2	PF08402.5	gi|568163809|ref|YP_008947224.1|	-	6e-08	32.5	0.0	1.5e-07	31.3	0.0	1.7	1	0	0	1	1	1	1	TOBE	domain
AAA_15	PF13175.1	gi|568163809|ref|YP_008947224.1|	-	4.6e-07	29.2	0.0	0.00066	18.8	0.0	2.2	2	0	0	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|568163809|ref|YP_008947224.1|	-	7.3e-06	25.3	1.0	0.00013	21.2	0.7	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
Arch_ATPase	PF01637.13	gi|568163809|ref|YP_008947224.1|	-	0.00043	20.0	0.1	0.0016	18.1	0.0	2.0	2	0	0	2	2	2	1	Archaeal	ATPase
DUF258	PF03193.11	gi|568163809|ref|YP_008947224.1|	-	0.0022	17.2	0.1	0.0056	15.8	0.0	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
ABC_ATPase	PF09818.4	gi|568163809|ref|YP_008947224.1|	-	0.0036	15.9	0.5	1.9	6.9	0.0	2.9	2	1	0	2	2	2	2	Predicted	ATPase	of	the	ABC	class
AAA_14	PF13173.1	gi|568163809|ref|YP_008947224.1|	-	0.0051	16.7	0.1	0.042	13.7	0.0	2.6	3	0	0	3	3	3	1	AAA	domain
AAA_19	PF13245.1	gi|568163809|ref|YP_008947224.1|	-	0.0075	15.9	0.0	0.023	14.4	0.0	1.8	1	0	0	1	1	1	1	Part	of	AAA	domain
Rad17	PF03215.10	gi|568163809|ref|YP_008947224.1|	-	0.0097	14.6	0.0	0.013	14.2	0.0	1.1	1	0	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
AAA_25	PF13481.1	gi|568163809|ref|YP_008947224.1|	-	0.014	14.8	0.0	0.22	10.9	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
AAA_16	PF13191.1	gi|568163809|ref|YP_008947224.1|	-	0.016	15.2	0.1	0.029	14.3	0.1	1.6	1	1	0	1	1	1	0	AAA	ATPase	domain
T2SE	PF00437.15	gi|568163809|ref|YP_008947224.1|	-	0.019	13.8	0.0	0.038	12.8	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_23	PF13476.1	gi|568163809|ref|YP_008947224.1|	-	0.024	14.9	0.1	0.024	14.9	0.0	2.3	3	0	0	3	3	2	0	AAA	domain
AAA_29	PF13555.1	gi|568163809|ref|YP_008947224.1|	-	0.029	13.9	0.1	0.065	12.7	0.1	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.1	gi|568163809|ref|YP_008947224.1|	-	0.029	14.5	1.1	0.25	11.4	0.8	2.2	1	1	0	1	1	1	0	AAA	domain
NACHT	PF05729.7	gi|568163809|ref|YP_008947224.1|	-	0.04	13.5	0.2	0.093	12.3	0.0	1.7	2	0	0	2	2	2	0	NACHT	domain
AAA_24	PF13479.1	gi|568163809|ref|YP_008947224.1|	-	0.04	13.4	0.3	0.63	9.5	0.0	2.4	3	0	0	3	3	3	0	AAA	domain
NTPase_1	PF03266.10	gi|568163809|ref|YP_008947224.1|	-	0.049	13.3	0.0	5	6.8	0.0	2.5	2	0	0	2	2	2	0	NTPase
AAA_17	PF13207.1	gi|568163809|ref|YP_008947224.1|	-	0.049	14.4	0.3	0.33	11.7	0.2	2.4	1	1	0	1	1	1	0	AAA	domain
IstB_IS21	PF01695.12	gi|568163809|ref|YP_008947224.1|	-	0.05	13.0	0.0	0.1	12.0	0.0	1.5	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
CBS	PF00571.23	gi|568163810|ref|YP_008947225.1|	-	2.4e-31	107.2	4.4	5.2e-15	54.9	0.3	2.1	2	0	0	2	2	2	2	CBS	domain
YopE	PF03545.8	gi|568163810|ref|YP_008947225.1|	-	0.0086	15.9	0.0	0.023	14.6	0.0	1.7	1	0	0	1	1	1	1	Yersinia	virulence	determinant	(YopE)
DisA_N	PF02457.11	gi|568163810|ref|YP_008947225.1|	-	0.088	11.9	0.0	0.16	11.1	0.0	1.4	1	0	0	1	1	1	0	DisA	bacterial	checkpoint	controller	nucleotide-binding
DUF2819	PF10995.3	gi|568163810|ref|YP_008947225.1|	-	0.16	10.6	0.3	0.31	9.7	0.1	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2819)
tRNA_SAD	PF07973.9	gi|568163811|ref|YP_008947226.1|	-	0.12	12.3	0.1	0.21	11.5	0.1	1.4	1	0	0	1	1	1	0	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
Pyr_redox_2	PF07992.9	gi|568163812|ref|YP_008947227.1|	-	5.1e-30	104.8	0.7	6.4e-30	104.5	0.5	1.1	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|568163812|ref|YP_008947227.1|	-	6.5e-09	36.1	0.3	2e-06	28.0	0.0	2.9	1	1	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.19	gi|568163812|ref|YP_008947227.1|	-	1.8e-07	30.3	3.1	7.1e-06	25.1	0.2	3.0	2	1	0	3	3	3	1	FAD	binding	domain
DAO	PF01266.19	gi|568163812|ref|YP_008947227.1|	-	2.8e-07	29.7	0.9	1.4e-05	24.2	0.2	2.5	3	0	0	3	3	3	1	FAD	dependent	oxidoreductase
Thi4	PF01946.12	gi|568163812|ref|YP_008947227.1|	-	1.1e-05	24.6	0.3	0.0095	15.0	0.1	2.3	2	0	0	2	2	2	2	Thi4	family
FAD_oxidored	PF12831.2	gi|568163812|ref|YP_008947227.1|	-	4.1e-05	22.8	0.1	0.00047	19.3	0.0	2.1	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|568163812|ref|YP_008947227.1|	-	6.2e-05	22.9	0.1	0.00013	21.8	0.1	1.6	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
GIDA	PF01134.17	gi|568163812|ref|YP_008947227.1|	-	0.00018	20.4	0.1	0.00018	20.4	0.1	3.4	2	2	1	4	4	4	1	Glucose	inhibited	division	protein	A
Pyr_redox	PF00070.22	gi|568163812|ref|YP_008947227.1|	-	0.00023	21.5	6.9	0.0026	18.1	0.1	3.2	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|568163812|ref|YP_008947227.1|	-	0.0016	16.9	1.0	0.019	13.4	0.0	2.6	3	0	0	3	3	3	1	HI0933-like	protein
FAD_binding_3	PF01494.14	gi|568163812|ref|YP_008947227.1|	-	0.0096	15.0	0.0	0.017	14.2	0.0	1.4	1	0	0	1	1	1	1	FAD	binding	domain
Lycopene_cycl	PF05834.7	gi|568163812|ref|YP_008947227.1|	-	0.028	13.3	0.1	0.17	10.7	0.1	2.0	2	0	0	2	2	2	0	Lycopene	cyclase	protein
CBS	PF00571.23	gi|568163812|ref|YP_008947227.1|	-	0.071	12.9	0.0	0.24	11.2	0.0	1.9	1	0	0	1	1	1	0	CBS	domain
PMSR	PF01625.16	gi|568163813|ref|YP_008947228.1|	-	2.1e-65	219.3	0.3	2.4e-65	219.1	0.2	1.0	1	0	0	1	1	1	1	Peptide	methionine	sulfoxide	reductase
Rubrerythrin	PF02915.12	gi|568163813|ref|YP_008947228.1|	-	0.15	12.3	2.6	0.34	11.2	1.8	1.5	1	1	0	1	1	1	0	Rubrerythrin
TrmB	PF01978.14	gi|568163814|ref|YP_008947229.1|	-	9.5e-12	44.4	0.2	3e-06	26.8	0.0	2.4	2	0	0	2	2	2	2	Sugar-specific	transcriptional	regulator	TrmB
HTH_45	PF14947.1	gi|568163814|ref|YP_008947229.1|	-	1.1e-09	37.9	7.5	5.9e-08	32.4	0.2	2.7	2	0	0	2	2	2	2	Winged	helix-turn-helix
MarR	PF01047.17	gi|568163814|ref|YP_008947229.1|	-	1.2e-09	37.6	0.5	5.8e-07	29.1	0.1	2.5	2	0	0	2	2	2	1	MarR	family
HTH_11	PF08279.7	gi|568163814|ref|YP_008947229.1|	-	1e-08	34.6	2.2	0.0013	18.3	0.0	2.8	3	0	0	3	3	2	2	HTH	domain
HTH_24	PF13412.1	gi|568163814|ref|YP_008947229.1|	-	1.6e-08	33.8	5.0	0.00024	20.3	0.4	3.2	3	0	0	3	3	3	2	Winged	helix-turn-helix	DNA-binding
HTH_27	PF13463.1	gi|568163814|ref|YP_008947229.1|	-	1.9e-08	34.4	0.1	1e-06	28.9	0.1	2.2	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|568163814|ref|YP_008947229.1|	-	3.4e-08	33.0	0.0	0.0025	17.4	0.0	2.3	2	0	0	2	2	2	2	MarR	family
HTH_20	PF12840.2	gi|568163814|ref|YP_008947229.1|	-	2e-06	27.4	0.0	0.028	14.2	0.0	2.4	2	0	0	2	2	2	2	Helix-turn-helix	domain
GntR	PF00392.16	gi|568163814|ref|YP_008947229.1|	-	3.1e-05	23.3	0.0	0.22	10.9	0.0	2.3	2	0	0	2	2	2	2	Bacterial	regulatory	proteins,	gntR	family
HxlR	PF01638.12	gi|568163814|ref|YP_008947229.1|	-	4.7e-05	22.9	1.3	0.00065	19.2	0.1	2.4	2	0	0	2	2	2	1	HxlR-like	helix-turn-helix
HTH_23	PF13384.1	gi|568163814|ref|YP_008947229.1|	-	0.00011	21.7	0.0	0.0084	15.7	0.0	2.3	2	0	0	2	2	2	1	Homeodomain-like	domain
HTH_30	PF13556.1	gi|568163814|ref|YP_008947229.1|	-	0.00011	21.7	0.0	0.00051	19.5	0.0	2.0	2	0	0	2	2	2	1	PucR	C-terminal	helix-turn-helix	domain
HTH_Crp_2	PF13545.1	gi|568163814|ref|YP_008947229.1|	-	0.0002	21.0	0.0	0.44	10.3	0.0	2.3	2	0	0	2	2	2	2	Crp-like	helix-turn-helix	domain
Phage_rep_org_N	PF09681.5	gi|568163814|ref|YP_008947229.1|	-	0.00083	18.9	1.4	0.26	10.8	0.1	2.4	2	0	0	2	2	2	1	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
DUF4254	PF14063.1	gi|568163814|ref|YP_008947229.1|	-	0.00088	18.8	0.4	0.0014	18.2	0.3	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4254)
HTH_10	PF04967.7	gi|568163814|ref|YP_008947229.1|	-	0.0009	18.7	0.9	0.012	15.1	0.0	2.6	3	0	0	3	3	2	1	HTH	DNA	binding	domain
HTH_29	PF13551.1	gi|568163814|ref|YP_008947229.1|	-	0.0017	18.4	0.0	0.021	14.9	0.0	2.1	2	0	0	2	2	2	1	Winged	helix-turn	helix
HTH_28	PF13518.1	gi|568163814|ref|YP_008947229.1|	-	0.0019	18.1	0.0	0.024	14.6	0.0	2.2	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_7	PF02796.10	gi|568163814|ref|YP_008947229.1|	-	0.0031	17.3	0.0	0.14	12.0	0.0	2.6	2	0	0	2	2	2	1	Helix-turn-helix	domain	of	resolvase
Rrf2	PF02082.15	gi|568163814|ref|YP_008947229.1|	-	0.0038	17.3	0.4	0.45	10.6	0.1	2.4	2	0	0	2	2	2	1	Transcriptional	regulator
HTH_Mga	PF08280.6	gi|568163814|ref|YP_008947229.1|	-	0.0042	16.8	3.4	0.015	15.0	0.3	2.6	2	0	0	2	2	2	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
Penicillinase_R	PF03965.11	gi|568163814|ref|YP_008947229.1|	-	0.0054	16.7	1.0	0.21	11.6	0.1	2.2	2	0	0	2	2	2	1	Penicillinase	repressor
Mrr_N	PF14338.1	gi|568163814|ref|YP_008947229.1|	-	0.0068	16.4	0.1	0.036	14.1	0.0	2.2	2	1	1	3	3	3	1	Mrr	N-terminal	domain
HTH_DeoR	PF08220.7	gi|568163814|ref|YP_008947229.1|	-	0.0092	15.4	0.4	0.29	10.6	0.0	2.5	2	1	0	2	2	2	1	DeoR-like	helix-turn-helix	domain
MerR_1	PF13411.1	gi|568163814|ref|YP_008947229.1|	-	0.011	15.4	0.0	0.03	14.0	0.0	1.7	1	0	0	1	1	1	0	MerR	HTH	family	regulatory	protein
HTH_8	PF02954.14	gi|568163814|ref|YP_008947229.1|	-	0.013	15.0	0.0	0.031	13.8	0.0	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	Fis	family
FeoC	PF09012.5	gi|568163814|ref|YP_008947229.1|	-	0.015	15.0	0.1	0.96	9.2	0.0	2.3	2	0	0	2	2	2	0	FeoC	like	transcriptional	regulator
HTH_AsnC-type	PF13404.1	gi|568163814|ref|YP_008947229.1|	-	0.026	14.0	0.0	1.3	8.6	0.0	2.4	2	0	0	2	2	2	0	AsnC-type	helix-turn-helix	domain
HTH_12	PF08461.5	gi|568163814|ref|YP_008947229.1|	-	0.033	13.9	0.7	0.73	9.6	0.1	2.4	2	0	0	2	2	2	0	Ribonuclease	R	winged-helix	domain
HTH_36	PF13730.1	gi|568163814|ref|YP_008947229.1|	-	0.033	14.3	0.5	2.3	8.3	0.1	2.5	2	0	0	2	2	2	0	Helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|568163814|ref|YP_008947229.1|	-	0.037	13.9	0.1	1.2	9.1	0.0	2.5	2	0	0	2	2	2	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Cullin_Nedd8	PF10557.4	gi|568163814|ref|YP_008947229.1|	-	0.039	13.7	0.2	0.12	12.1	0.1	1.8	1	0	0	1	1	1	0	Cullin	protein	neddylation	domain
MerR	PF00376.18	gi|568163814|ref|YP_008947229.1|	-	0.04	13.4	0.0	0.1	12.1	0.0	1.6	1	0	0	1	1	1	0	MerR	family	regulatory	protein
HTH_34	PF13601.1	gi|568163814|ref|YP_008947229.1|	-	0.065	13.2	0.7	0.28	11.2	0.1	2.3	2	1	0	2	2	2	0	Winged	helix	DNA-binding	domain
DUF387	PF04079.11	gi|568163814|ref|YP_008947229.1|	-	0.072	12.4	0.4	0.18	11.1	0.1	1.9	2	0	0	2	2	1	0	Putative	transcriptional	regulators	(Ypuh-like)
FaeA	PF04703.7	gi|568163814|ref|YP_008947229.1|	-	0.073	13.2	0.2	0.71	10.0	0.0	2.2	2	0	0	2	2	2	0	FaeA-like	protein
TetR_N	PF00440.18	gi|568163814|ref|YP_008947229.1|	-	0.11	12.0	0.1	0.82	9.3	0.0	2.4	3	0	0	3	3	2	0	Bacterial	regulatory	proteins,	tetR	family
DUF1690	PF07956.6	gi|568163814|ref|YP_008947229.1|	-	0.12	12.3	3.7	4.9	7.1	2.5	2.2	1	1	0	1	1	1	0	Protein	of	Unknown	function	(DUF1690)
HTH_17	PF12728.2	gi|568163814|ref|YP_008947229.1|	-	0.15	12.2	1.3	0.66	10.2	0.1	2.6	2	2	0	2	2	2	0	Helix-turn-helix	domain
UPF0122	PF04297.9	gi|568163814|ref|YP_008947229.1|	-	1.5	8.8	7.8	0.98	9.4	0.8	2.8	1	1	2	3	3	3	0	Putative	helix-turn-helix	protein,	YlxM	/	p13	like
Pkinase	PF00069.20	gi|568163815|ref|YP_008947230.1|	-	1e-30	106.7	0.0	1.7e-30	106.0	0.0	1.3	1	1	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|568163815|ref|YP_008947230.1|	-	1.3e-13	50.6	0.0	4.8e-13	48.7	0.0	2.0	1	1	0	1	1	1	1	Protein	tyrosine	kinase
Kinase-like	PF14531.1	gi|568163815|ref|YP_008947230.1|	-	4.5e-05	22.5	0.0	0.019	13.9	0.0	2.2	2	0	0	2	2	2	2	Kinase-like
Kdo	PF06293.9	gi|568163815|ref|YP_008947230.1|	-	0.0038	16.3	0.0	0.0057	15.7	0.0	1.2	1	0	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
P5CR_dimer	PF14748.1	gi|568164854|ref|YP_008947233.1|	-	8.2e-06	25.7	0.0	8.4e-06	25.7	0.0	1.0	1	0	0	1	1	1	1	Pyrroline-5-carboxylate	reductase	dimerisation
Lactamase_B	PF00753.22	gi|568163816|ref|YP_008947234.1|	-	5.1e-22	78.4	0.0	6.1e-22	78.2	0.0	1.1	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|568163816|ref|YP_008947234.1|	-	7.5e-06	25.6	0.0	1.2e-05	24.9	0.0	1.4	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
tRNA_edit	PF04073.10	gi|568164856|ref|YP_008947236.1|	-	1.5e-06	28.0	0.1	1.9e-06	27.7	0.1	1.1	1	0	0	1	1	1	1	Aminoacyl-tRNA	editing	domain
MFS_1	PF07690.11	gi|568164857|ref|YP_008947237.1|	-	1.5e-25	89.7	36.9	2.5e-14	52.7	12.0	2.1	1	1	0	2	2	2	2	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|568164857|ref|YP_008947237.1|	-	0.043	11.9	10.1	0.015	13.4	1.4	2.2	2	0	0	2	2	2	0	Transmembrane	secretion	effector
OATP	PF03137.15	gi|568164857|ref|YP_008947237.1|	-	8	4.3	13.4	0.036	12.1	1.0	2.7	2	1	1	3	3	3	0	Organic	Anion	Transporter	Polypeptide	(OATP)	family
MFS_1	PF07690.11	gi|568163817|ref|YP_008947238.1|	-	6.7e-58	196.0	72.5	3.7e-48	164.0	33.2	2.7	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|568163817|ref|YP_008947238.1|	-	2.5e-13	49.4	9.2	2.5e-13	49.4	6.4	2.6	2	0	0	2	2	2	2	Sugar	(and	other)	transporter
MFS_2	PF13347.1	gi|568163817|ref|YP_008947238.1|	-	3.1e-07	29.1	42.1	6.3e-05	21.5	6.7	3.3	1	1	2	3	3	3	3	MFS/sugar	transport	protein
OATP	PF03137.15	gi|568163817|ref|YP_008947238.1|	-	0.0022	16.1	0.6	0.0022	16.1	0.4	3.7	3	1	1	4	4	4	2	Organic	Anion	Transporter	Polypeptide	(OATP)	family
Peptidase_M50	PF02163.17	gi|568163817|ref|YP_008947238.1|	-	7.2	5.5	11.1	4.1	6.3	1.1	3.9	2	2	1	3	3	3	0	Peptidase	family	M50
NPCBM_assoc	PF10633.4	gi|568163818|ref|YP_008947239.1|	-	8.9e-15	54.5	16.7	0.012	15.6	0.1	8.4	7	1	1	8	8	8	4	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
CARDB	PF07705.6	gi|568163818|ref|YP_008947239.1|	-	4.3e-08	33.1	34.4	0.018	15.0	1.5	6.2	4	2	2	7	7	7	4	CARDB
Rifin_STEVOR	PF02009.11	gi|568163818|ref|YP_008947239.1|	-	0.52	9.8	7.3	0.83	9.2	5.0	1.3	1	0	0	1	1	1	0	Rifin/stevor	family
AMP-binding	PF00501.23	gi|568163819|ref|YP_008947240.1|	-	5.6e-84	281.9	0.0	6.8e-84	281.6	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|568163819|ref|YP_008947240.1|	-	1.1e-15	58.3	0.1	2.1e-15	57.4	0.1	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
MFS_1	PF07690.11	gi|568164858|ref|YP_008947241.1|	-	0.23	10.1	53.9	0.067	11.8	29.7	3.4	1	1	1	2	2	2	0	Major	Facilitator	Superfamily
HTH_24	PF13412.1	gi|568163820|ref|YP_008947242.1|	-	3.6e-07	29.4	3.0	6.3e-07	28.6	2.1	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.17	gi|568163820|ref|YP_008947242.1|	-	5.8e-07	29.1	0.3	9.9e-07	28.3	0.2	1.3	1	0	0	1	1	1	1	MarR	family
HTH_34	PF13601.1	gi|568163820|ref|YP_008947242.1|	-	8.5e-07	28.9	0.1	1e-06	28.6	0.1	1.1	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_27	PF13463.1	gi|568163820|ref|YP_008947242.1|	-	2.4e-05	24.5	0.1	3.6e-05	23.9	0.1	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_Crp_2	PF13545.1	gi|568163820|ref|YP_008947242.1|	-	9.5e-05	22.1	0.0	0.00014	21.5	0.0	1.5	1	1	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_5	PF01022.15	gi|568163820|ref|YP_008947242.1|	-	0.00014	21.4	0.2	0.00026	20.5	0.2	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
MarR_2	PF12802.2	gi|568163820|ref|YP_008947242.1|	-	0.00014	21.4	0.0	0.0002	20.9	0.0	1.3	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|568163820|ref|YP_008947242.1|	-	0.00015	21.3	0.5	0.00026	20.6	0.1	1.5	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
Rrf2	PF02082.15	gi|568163820|ref|YP_008947242.1|	-	0.0055	16.7	0.1	0.0088	16.1	0.1	1.3	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_20	PF12840.2	gi|568163820|ref|YP_008947242.1|	-	0.0071	16.1	0.1	0.011	15.5	0.1	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
LexA_DNA_bind	PF01726.11	gi|568163820|ref|YP_008947242.1|	-	0.013	15.0	0.1	0.018	14.5	0.0	1.3	1	0	0	1	1	1	0	LexA	DNA	binding	domain
GntR	PF00392.16	gi|568163820|ref|YP_008947242.1|	-	0.018	14.4	0.2	0.032	13.6	0.1	1.5	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
HTH_11	PF08279.7	gi|568163820|ref|YP_008947242.1|	-	0.026	14.1	0.6	0.039	13.5	0.4	1.4	1	0	0	1	1	1	0	HTH	domain
HTH_12	PF08461.5	gi|568163820|ref|YP_008947242.1|	-	0.027	14.2	0.3	0.051	13.2	0.2	1.5	1	0	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
Fe_dep_repress	PF01325.14	gi|568163820|ref|YP_008947242.1|	-	0.041	13.8	0.0	0.078	12.9	0.0	1.5	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
RNA_pol_Rpb2_6	PF00562.23	gi|568163820|ref|YP_008947242.1|	-	0.077	11.7	0.0	0.077	11.7	0.0	1.0	1	0	0	1	1	1	0	RNA	polymerase	Rpb2,	domain	6
Sigma70_r4	PF04545.11	gi|568163820|ref|YP_008947242.1|	-	0.1	11.8	0.1	0.72	9.2	0.0	2.2	2	1	0	2	2	2	0	Sigma-70,	region	4
DUF3395	PF11875.3	gi|568163820|ref|YP_008947242.1|	-	0.11	12.1	0.1	0.11	12.1	0.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3395)
HTH_DeoR	PF08220.7	gi|568163820|ref|YP_008947242.1|	-	0.11	12.0	0.3	0.35	10.4	0.1	1.9	2	1	0	2	2	2	0	DeoR-like	helix-turn-helix	domain
Crp	PF00325.15	gi|568163820|ref|YP_008947242.1|	-	0.16	11.4	0.7	14	5.2	0.2	2.4	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	crp	family
IU_nuc_hydro	PF01156.14	gi|568163821|ref|YP_008947243.1|	-	1.5e-79	267.4	0.0	1.8e-79	267.2	0.0	1.0	1	0	0	1	1	1	1	Inosine-uridine	preferring	nucleoside	hydrolase
FAD_binding_4	PF01565.18	gi|568163822|ref|YP_008947244.1|	-	2.2e-38	130.8	0.0	3.4e-38	130.2	0.0	1.3	1	0	0	1	1	1	1	FAD	binding	domain
FAD-oxidase_C	PF02913.14	gi|568163822|ref|YP_008947244.1|	-	4.3e-35	121.2	0.0	5.6e-35	120.8	0.0	1.2	1	0	0	1	1	1	1	FAD	linked	oxidases,	C-terminal	domain
FAD_binding_5	PF00941.16	gi|568163822|ref|YP_008947244.1|	-	0.14	11.5	0.3	0.53	9.7	0.2	1.9	1	1	0	1	1	1	0	FAD	binding	domain	in	molybdopterin	dehydrogenase
FAD_binding_4	PF01565.18	gi|568163823|ref|YP_008947245.1|	-	2.7e-07	30.1	0.0	4.6e-07	29.3	0.0	1.3	1	0	0	1	1	1	1	FAD	binding	domain
AIRC	PF00731.15	gi|568163824|ref|YP_008947246.1|	-	1.3e-68	228.9	0.4	1.5e-68	228.8	0.3	1.0	1	0	0	1	1	1	1	AIR	carboxylase
Fe-ADH	PF00465.14	gi|568163824|ref|YP_008947246.1|	-	0.0053	15.4	0.1	0.0083	14.8	0.1	1.2	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Glutaredoxin	PF00462.19	gi|568163824|ref|YP_008947246.1|	-	0.014	15.4	0.1	0.041	13.8	0.0	1.8	2	0	0	2	2	2	0	Glutaredoxin
DUF4419	PF14388.1	gi|568163824|ref|YP_008947246.1|	-	0.015	14.5	0.0	0.022	13.9	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4419)
Fe-ADH_2	PF13685.1	gi|568163824|ref|YP_008947246.1|	-	0.019	14.2	0.0	0.024	13.9	0.0	1.2	1	0	0	1	1	1	0	Iron-containing	alcohol	dehydrogenase
WIYLD	PF10440.4	gi|568163824|ref|YP_008947246.1|	-	0.087	12.7	0.1	2.4	8.1	0.0	2.3	2	0	0	2	2	2	0	Ubiquitin-binding	WIYLD	domain
VirE	PF05272.6	gi|568163824|ref|YP_008947246.1|	-	0.16	11.4	0.1	0.64	9.4	0.0	1.8	2	0	0	2	2	2	0	Virulence-associated	protein	E
ATP-grasp	PF02222.17	gi|568163825|ref|YP_008947247.1|	-	2.4e-47	160.5	0.0	3.8e-47	159.8	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|568163825|ref|YP_008947247.1|	-	0.00038	20.2	0.0	0.0011	18.7	0.0	1.7	1	1	0	1	1	1	1	ATP-grasp	domain
DUF1474	PF07342.6	gi|568163825|ref|YP_008947247.1|	-	0.0013	18.9	6.6	0.09	13.0	0.4	3.7	5	0	0	5	5	5	2	Protein	of	unknown	function	(DUF1474)
ATP-grasp_3	PF02655.9	gi|568163825|ref|YP_008947247.1|	-	0.0014	18.4	0.0	0.0032	17.3	0.0	1.6	1	1	0	1	1	1	1	ATP-grasp	domain
HTH_1	PF00126.22	gi|568163826|ref|YP_008947248.1|	-	0.0067	16.1	0.0	0.012	15.2	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
Pkinase	PF00069.20	gi|568163827|ref|YP_008947249.1|	-	2.2e-27	95.8	0.1	7e-27	94.2	0.0	1.8	2	0	0	2	2	2	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|568163827|ref|YP_008947249.1|	-	7.4e-11	41.6	0.0	1.8e-10	40.3	0.0	1.7	1	1	0	1	1	1	1	Protein	tyrosine	kinase
Apc3	PF12895.2	gi|568163827|ref|YP_008947249.1|	-	4.6e-08	33.0	6.9	2.2e-05	24.4	0.8	2.6	2	0	0	2	2	2	2	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_16	PF13432.1	gi|568163827|ref|YP_008947249.1|	-	6.8e-07	29.7	0.1	0.0092	16.6	0.1	3.1	2	1	0	2	2	2	2	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|568163827|ref|YP_008947249.1|	-	1.1e-06	28.8	0.3	0.01	16.1	0.1	2.6	2	0	0	2	2	2	2	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|568163827|ref|YP_008947249.1|	-	1.5e-06	28.3	0.1	0.5	11.1	0.0	3.8	2	2	2	4	4	4	2	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|568163827|ref|YP_008947249.1|	-	6.2e-06	25.7	7.8	1.1e-05	24.9	0.3	3.3	2	2	1	3	3	3	2	TPR	repeat
TPR_2	PF07719.12	gi|568163827|ref|YP_008947249.1|	-	8.1e-06	25.3	8.9	0.003	17.3	0.1	4.2	3	1	1	4	4	4	2	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|568163827|ref|YP_008947249.1|	-	1.7e-05	24.2	7.9	0.012	15.2	0.0	4.2	4	0	0	4	4	4	2	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|568163827|ref|YP_008947249.1|	-	2.8e-05	23.9	6.8	0.14	12.1	0.0	3.7	2	2	2	4	4	3	2	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|568163827|ref|YP_008947249.1|	-	0.00068	19.9	2.5	6	7.5	0.0	4.8	4	0	0	4	4	4	1	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|568163827|ref|YP_008947249.1|	-	0.015	15.0	3.8	0.13	12.1	0.0	3.3	3	0	0	3	3	3	0	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|568163827|ref|YP_008947249.1|	-	0.12	12.1	5.5	2.6	8.0	0.0	4.1	3	1	1	4	4	4	0	Tetratricopeptide	repeat
TPR_10	PF13374.1	gi|568163827|ref|YP_008947249.1|	-	0.12	12.2	0.3	0.75	9.8	0.0	2.3	2	0	0	2	2	2	0	Tetratricopeptide	repeat
APH	PF01636.18	gi|568163827|ref|YP_008947249.1|	-	0.12	12.0	0.0	10	5.7	0.0	2.3	1	1	0	2	2	2	0	Phosphotransferase	enzyme	family
PPR	PF01535.15	gi|568163827|ref|YP_008947249.1|	-	0.25	11.3	5.2	46	4.2	0.0	4.7	5	0	0	5	5	5	0	PPR	repeat
Ribonuc_L-PSP	PF01042.16	gi|568163829|ref|YP_008947251.1|	-	8.5e-42	141.7	0.0	9.3e-42	141.6	0.0	1.0	1	0	0	1	1	1	1	Endoribonuclease	L-PSP
Flavodoxin_1	PF00258.20	gi|568163829|ref|YP_008947251.1|	-	0.15	12.0	0.0	0.2	11.6	0.0	1.1	1	0	0	1	1	1	0	Flavodoxin
CBS	PF00571.23	gi|568163830|ref|YP_008947252.1|	-	6.3e-49	163.5	13.4	2.1e-15	56.1	0.1	4.2	4	0	0	4	4	4	4	CBS	domain
DisA_N	PF02457.11	gi|568163830|ref|YP_008947252.1|	-	0.045	12.8	0.3	8	5.6	0.0	3.1	3	0	0	3	3	3	0	DisA	bacterial	checkpoint	controller	nucleotide-binding
UPF0262	PF06793.7	gi|568163830|ref|YP_008947252.1|	-	0.049	13.3	0.0	0.077	12.7	0.0	1.3	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0262)
GDE_C	PF06202.9	gi|568163831|ref|YP_008947253.1|	-	2.9e-114	381.6	0.0	4.2e-114	381.1	0.0	1.2	1	0	0	1	1	1	1	Amylo-alpha-1,6-glucosidase
GDE_N	PF12439.3	gi|568163831|ref|YP_008947253.1|	-	1.2e-49	168.5	0.9	1.9e-49	167.9	0.4	1.4	2	0	0	2	2	2	1	Glycogen	debranching	enzyme	N	terminal
DUF608	PF04685.8	gi|568163831|ref|YP_008947253.1|	-	3.2e-05	22.8	0.0	9.6e-05	21.2	0.0	1.7	1	1	0	1	1	1	1	Protein	of	unknown	function,	DUF608
Pox_H7	PF04787.7	gi|568163831|ref|YP_008947253.1|	-	0.048	13.4	1.2	0.085	12.6	0.8	1.4	1	0	0	1	1	1	0	Late	protein	H7
WSN	PF02206.13	gi|568163831|ref|YP_008947253.1|	-	0.13	12.0	0.2	0.35	10.6	0.0	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function
Glyco_hydro_15	PF00723.16	gi|568163832|ref|YP_008947254.1|	-	2.5e-17	62.5	0.4	3.7e-13	48.8	0.6	3.2	1	1	1	2	2	2	2	Glycosyl	hydrolases	family	15
NTP_transferase	PF00483.18	gi|568163833|ref|YP_008947255.1|	-	1.8e-39	135.5	0.0	2.3e-39	135.1	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|568163833|ref|YP_008947255.1|	-	8.7e-06	25.9	0.0	1.8e-05	24.8	0.0	1.6	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep	PF00132.19	gi|568163833|ref|YP_008947255.1|	-	2e-05	23.8	9.7	0.03	13.8	0.2	4.5	2	2	3	5	5	5	4	Bacterial	transferase	hexapeptide	(six	repeats)
Hexapep_2	PF14602.1	gi|568163833|ref|YP_008947255.1|	-	0.33	10.5	4.4	7	6.3	0.6	3.1	2	1	0	2	2	2	0	Hexapeptide	repeat	of	succinyl-transferase
Glyco_hydro_57	PF03065.10	gi|568163834|ref|YP_008947256.1|	-	5.1e-72	242.7	6.3	3.4e-71	240.0	4.4	2.1	1	1	0	1	1	1	1	Glycosyl	hydrolase	family	57
Erp_C	PF06780.6	gi|568163834|ref|YP_008947256.1|	-	0.11	12.2	7.4	4.9	6.9	0.1	3.2	3	0	0	3	3	3	0	Erp	protein	C-terminus
Glyco_transf_5	PF08323.6	gi|568163835|ref|YP_008947257.1|	-	7e-32	110.8	0.8	9.6e-32	110.4	0.1	1.5	2	0	0	2	2	2	1	Starch	synthase	catalytic	domain
Glycos_transf_1	PF00534.15	gi|568163835|ref|YP_008947257.1|	-	7.7e-31	106.8	0.0	1.5e-30	105.8	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|568163835|ref|YP_008947257.1|	-	6.8e-13	48.9	0.0	1.3e-12	48.0	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_4_4	PF13579.1	gi|568163835|ref|YP_008947257.1|	-	6.2e-07	29.6	0.2	9.3e-06	25.8	0.1	2.3	1	1	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_1_2	PF13524.1	gi|568163835|ref|YP_008947257.1|	-	0.0018	18.4	0.0	0.02	15.1	0.0	2.2	1	1	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|568163835|ref|YP_008947257.1|	-	0.0029	17.3	0.5	0.015	14.9	0.0	2.1	2	0	0	2	2	2	1	Glycosyltransferase	Family	4
Oxidored_molyb	PF00174.14	gi|568163836|ref|YP_008947258.1|	-	1.2e-43	148.4	0.0	1.5e-43	148.1	0.0	1.0	1	0	0	1	1	1	1	Oxidoreductase	molybdopterin	binding	domain
Cpn60_TCP1	PF00118.19	gi|568163837|ref|YP_008947259.1|	-	9.3e-152	506.0	21.6	1.1e-151	505.8	15.0	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
DUF650	PF04894.7	gi|568163838|ref|YP_008947260.1|	-	0.042	13.3	0.0	0.042	13.3	0.0	1.0	1	0	0	1	1	1	0	Archaeal	protein	of	unknown	function	(DUF650)
CAMP_factor	PF07373.6	gi|568163838|ref|YP_008947260.1|	-	0.089	12.2	0.0	0.11	12.0	0.0	1.1	1	0	0	1	1	1	0	CAMP	factor	(Cfa)
Methyltransf_11	PF08241.7	gi|568163839|ref|YP_008947261.1|	-	0.00059	20.2	0.0	0.00095	19.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|568163839|ref|YP_008947261.1|	-	0.061	12.4	0.1	0.1	11.7	0.0	1.4	1	1	0	1	1	1	0	ubiE/COQ5	methyltransferase	family
CBS	PF00571.23	gi|568163840|ref|YP_008947262.1|	-	1.8e-23	82.0	0.1	9.2e-11	41.3	0.0	2.0	2	0	0	2	2	2	2	CBS	domain
Amidohydro_1	PF01979.15	gi|568163840|ref|YP_008947262.1|	-	0.089	12.4	0.1	0.26	10.8	0.0	1.6	1	1	0	1	1	1	0	Amidohydrolase	family
DSBA	PF01323.15	gi|568163841|ref|YP_008947263.1|	-	1.5e-22	80.1	0.6	4.6e-22	78.5	0.4	1.7	1	1	0	1	1	1	1	DSBA-like	thioredoxin	domain
Thioredoxin_5	PF13743.1	gi|568163841|ref|YP_008947263.1|	-	1.3e-19	70.4	0.3	2.2e-19	69.7	0.2	1.3	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_4	PF13462.1	gi|568163841|ref|YP_008947263.1|	-	1.9e-08	34.5	3.3	2.2e-06	27.7	0.1	2.2	1	1	1	2	2	2	2	Thioredoxin
Thioredoxin_3	PF13192.1	gi|568163841|ref|YP_008947263.1|	-	6.4e-06	25.9	0.1	0.00078	19.2	0.0	2.4	2	0	0	2	2	2	1	Thioredoxin	domain
Thioredoxin_2	PF13098.1	gi|568163841|ref|YP_008947263.1|	-	0.00026	21.1	2.0	0.011	15.9	1.4	2.3	1	1	0	1	1	1	1	Thioredoxin-like	domain
DUF1525	PF07511.6	gi|568163841|ref|YP_008947263.1|	-	0.018	15.0	0.0	0.031	14.2	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1525)
Gal4_dimer	PF03902.8	gi|568163841|ref|YP_008947263.1|	-	0.083	12.8	0.1	0.28	11.1	0.0	1.9	2	0	0	2	2	2	0	Gal4-like	dimerisation	domain
VWA_2	PF13519.1	gi|568163842|ref|YP_008947264.1|	-	6.6e-17	62.1	0.0	1.2e-16	61.3	0.0	1.3	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.23	gi|568163842|ref|YP_008947264.1|	-	2.4e-12	46.9	0.9	4.1e-12	46.1	0.1	1.7	2	0	0	2	2	2	1	von	Willebrand	factor	type	A	domain
VWA_3	PF13768.1	gi|568163842|ref|YP_008947264.1|	-	1.2e-11	44.5	0.0	2.9e-11	43.3	0.0	1.6	1	1	0	1	1	1	1	von	Willebrand	factor	type	A	domain
vWA-TerF-like	PF10138.4	gi|568163842|ref|YP_008947264.1|	-	9e-05	22.3	0.0	0.00031	20.6	0.0	1.9	1	1	0	1	1	1	1	vWA	found	in	TerF	C	terminus
FHA	PF00498.21	gi|568163843|ref|YP_008947265.1|	-	1.7e-16	60.0	0.3	4.3e-16	58.7	0.0	1.7	2	0	0	2	2	2	1	FHA	domain
zinc_ribbon_2	PF13240.1	gi|568163843|ref|YP_008947265.1|	-	1.5e-05	24.3	2.4	3.3e-05	23.2	1.7	1.6	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|568163843|ref|YP_008947265.1|	-	0.00016	20.8	0.5	0.00027	20.0	0.4	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|568163843|ref|YP_008947265.1|	-	0.00091	18.9	2.3	0.0015	18.2	1.6	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-RanBP	PF00641.13	gi|568163843|ref|YP_008947265.1|	-	0.0012	17.9	1.6	0.0018	17.3	1.1	1.3	1	0	0	1	1	1	1	Zn-finger	in	Ran	binding	protein	and	others
Prok-RING_1	PF14446.1	gi|568163843|ref|YP_008947265.1|	-	0.035	13.8	1.1	0.05	13.3	0.8	1.2	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
zf-Sec23_Sec24	PF04810.10	gi|568163843|ref|YP_008947265.1|	-	0.057	12.9	1.8	0.075	12.6	0.2	1.9	2	0	0	2	2	2	0	Sec23/Sec24	zinc	finger
DUF2318	PF10080.4	gi|568163843|ref|YP_008947265.1|	-	0.11	12.2	0.7	0.24	11.2	0.5	1.5	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2318)
DUF2387	PF09526.5	gi|568163843|ref|YP_008947265.1|	-	0.18	11.7	0.8	0.41	10.5	0.6	1.6	1	0	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
A2L_zn_ribbon	PF08792.5	gi|568163843|ref|YP_008947265.1|	-	0.38	10.2	3.9	3.3	7.2	2.7	2.3	1	1	0	1	1	1	0	A2L	zinc	ribbon	domain
DUF605	PF04652.11	gi|568163843|ref|YP_008947265.1|	-	1.7	7.9	15.4	2.1	7.6	10.7	1.1	1	0	0	1	1	1	0	Vta1	like
Rubredoxin	PF00301.15	gi|568163843|ref|YP_008947265.1|	-	2.5	8.0	5.6	11	5.9	2.3	2.9	2	1	0	2	2	2	0	Rubredoxin
PAT1	PF09770.4	gi|568163843|ref|YP_008947265.1|	-	3	5.9	21.2	3.7	5.6	14.7	1.0	1	0	0	1	1	1	0	Topoisomerase	II-associated	protein	PAT1
VWA_2	PF13519.1	gi|568163844|ref|YP_008947266.1|	-	2.2e-22	80.0	0.0	8.1e-22	78.1	0.0	1.8	2	0	0	2	2	2	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.23	gi|568163844|ref|YP_008947266.1|	-	1.2e-18	67.4	0.3	5.5e-18	65.3	0.0	1.9	2	0	0	2	2	2	1	von	Willebrand	factor	type	A	domain
VWA_3	PF13768.1	gi|568163844|ref|YP_008947266.1|	-	2.1e-09	37.2	0.0	5e-09	36.0	0.0	1.5	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA_CoxE	PF05762.9	gi|568163844|ref|YP_008947266.1|	-	8.2e-06	25.1	0.0	2.1e-05	23.7	0.0	1.6	2	0	0	2	2	2	1	VWA	domain	containing	CoxE-like	protein
vWA-TerF-like	PF10138.4	gi|568163844|ref|YP_008947266.1|	-	0.00011	22.0	0.2	0.00076	19.3	0.0	2.2	2	0	0	2	2	2	1	vWA	found	in	TerF	C	terminus
DUF2201	PF09967.4	gi|568163844|ref|YP_008947266.1|	-	0.00025	21.0	0.2	0.00085	19.3	0.0	2.0	2	0	0	2	2	2	1	VWA-like	domain	(DUF2201)
Antitoxin-MazE	PF04014.13	gi|568163845|ref|YP_008947267.1|	-	1.9e-07	30.6	0.6	2.2e-07	30.4	0.4	1.2	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
eIF-1a	PF01176.14	gi|568163845|ref|YP_008947267.1|	-	0.0077	15.6	0.7	0.0077	15.6	0.5	1.7	1	1	1	2	2	2	1	Translation	initiation	factor	1A	/	IF-1
DUF402	PF04167.8	gi|568163846|ref|YP_008947268.1|	-	7.7e-19	67.3	2.8	1.8e-18	66.1	2.0	1.7	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF402)
KaiC	PF06745.8	gi|568163846|ref|YP_008947268.1|	-	0.016	14.3	0.2	0.26	10.3	0.0	2.1	2	0	0	2	2	2	0	KaiC
Spindle_Spc25	PF08234.7	gi|568163846|ref|YP_008947268.1|	-	0.017	15.1	0.0	0.095	12.7	0.0	2.4	2	0	0	2	2	2	0	Chromosome	segregation	protein	Spc25
Aconitase	PF00330.15	gi|568163847|ref|YP_008947269.1|	-	3.3e-128	428.0	0.0	6.2e-128	427.1	0.0	1.4	2	0	0	2	2	2	1	Aconitase	family	(aconitate	hydratase)
Aconitase_C	PF00694.14	gi|568163847|ref|YP_008947269.1|	-	2.8e-34	118.0	0.0	6e-34	116.9	0.0	1.5	1	0	0	1	1	1	1	Aconitase	C-terminal	domain
Cas_DxTHG	PF09455.5	gi|568164859|ref|YP_008947270.1|	-	1.3e-45	156.2	9.9	1.5e-45	155.9	6.9	1.1	1	0	0	1	1	1	1	CRISPR-associated	(Cas)	DxTHG	family
DUF2258	PF10015.4	gi|568163848|ref|YP_008947271.1|	-	1.9e-30	104.5	2.6	1.9e-30	104.5	1.8	2.1	2	0	0	2	2	2	1	Uncharacterized	protein	conserved	in	archaea	(DUF2258)
TMF_DNA_bd	PF12329.3	gi|568163848|ref|YP_008947271.1|	-	0.0019	17.9	5.3	0.0019	17.9	3.7	2.3	2	0	0	2	2	2	1	TATA	element	modulatory	factor	1	DNA	binding
AAA_11	PF13086.1	gi|568163848|ref|YP_008947271.1|	-	0.0044	16.6	2.7	0.0055	16.3	1.9	1.2	1	0	0	1	1	1	1	AAA	domain
Spectrin	PF00435.16	gi|568163848|ref|YP_008947271.1|	-	0.0098	16.1	1.6	0.023	15.0	0.6	1.9	2	0	0	2	2	2	1	Spectrin	repeat
MutS_II	PF05188.12	gi|568163848|ref|YP_008947271.1|	-	0.014	15.4	0.8	0.067	13.2	0.5	1.9	1	1	0	1	1	1	0	MutS	domain	II
NPV_P10	PF05531.7	gi|568163848|ref|YP_008947271.1|	-	0.02	15.1	2.7	0.077	13.2	0.3	2.2	2	0	0	2	2	2	0	Nucleopolyhedrovirus	P10	protein
DASH_Duo1	PF08651.5	gi|568163848|ref|YP_008947271.1|	-	0.051	13.1	0.3	0.17	11.4	0.3	1.8	2	0	0	2	2	2	0	DASH	complex	subunit	Duo1
DUF342	PF03961.8	gi|568163848|ref|YP_008947271.1|	-	0.12	10.7	6.3	0.18	10.2	4.4	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
DIT1_PvcA	PF05141.7	gi|568163848|ref|YP_008947271.1|	-	0.16	11.2	2.0	0.22	10.8	1.4	1.2	1	0	0	1	1	1	0	Pyoverdine/dityrosine	biosynthesis	protein
DUF4140	PF13600.1	gi|568163848|ref|YP_008947271.1|	-	0.21	12.0	1.4	0.4	11.1	0.6	1.9	1	1	1	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
V_ATPase_I	PF01496.14	gi|568163848|ref|YP_008947271.1|	-	0.34	8.7	5.6	0.37	8.5	3.9	1.0	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
Ded_cyto	PF06920.8	gi|568163848|ref|YP_008947271.1|	-	0.45	9.7	4.0	3.4	6.9	0.4	2.1	2	0	0	2	2	2	0	Dedicator	of	cytokinesis
Myb_DNA-bind_4	PF13837.1	gi|568163848|ref|YP_008947271.1|	-	0.64	10.1	4.1	10	6.3	2.8	2.3	1	1	0	1	1	1	0	Myb/SANT-like	DNA-binding	domain
IncA	PF04156.9	gi|568163848|ref|YP_008947271.1|	-	0.7	9.4	6.1	0.71	9.4	3.4	1.5	1	1	0	1	1	1	0	IncA	protein
HR1	PF02185.11	gi|568163848|ref|YP_008947271.1|	-	1.1	9.0	10.6	5.2	6.8	7.4	2.1	1	1	0	1	1	1	0	Hr1	repeat
DUF2935	PF11155.3	gi|568163848|ref|YP_008947271.1|	-	1.3	9.1	4.4	5	7.2	3.0	1.9	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF2935)
Enkurin	PF13864.1	gi|568163848|ref|YP_008947271.1|	-	1.3	9.2	7.7	0.14	12.3	1.6	2.1	2	1	0	2	2	2	0	Calmodulin-binding
IMCp	PF12314.3	gi|568163848|ref|YP_008947271.1|	-	1.6	8.9	7.0	2.4	8.3	0.2	2.4	2	0	0	2	2	2	0	Inner	membrane	complex	protein
DUF2361	PF10153.4	gi|568163848|ref|YP_008947271.1|	-	2.5	8.3	9.5	0.51	10.5	4.0	1.7	2	0	0	2	2	2	0	Uncharacterised	conserved	protein	(DUF2361)
bZIP_1	PF00170.16	gi|568163848|ref|YP_008947271.1|	-	3.4	7.7	9.3	0.45	10.5	3.0	2.0	2	0	0	2	2	2	0	bZIP	transcription	factor
Arc_PepC_II	PF06847.6	gi|568163848|ref|YP_008947271.1|	-	3.4	8.1	4.7	8.4	6.8	2.2	2.3	2	1	0	2	2	1	0	Archaeal	Peptidase	A24	C-terminus	Type	II
DivIVA	PF05103.8	gi|568163848|ref|YP_008947271.1|	-	3.7	7.6	9.7	2.6	8.1	2.6	2.6	1	1	1	2	2	2	0	DivIVA	protein
AAA_23	PF13476.1	gi|568163848|ref|YP_008947271.1|	-	7.1	6.8	13.1	8.2	6.6	9.1	1.3	1	1	0	1	1	1	0	AAA	domain
Pox_A_type_inc	PF04508.7	gi|568163848|ref|YP_008947271.1|	-	8.4	6.4	13.7	0.37	10.7	0.7	4.1	4	0	0	4	4	4	0	Viral	A-type	inclusion	protein	repeat
FUN14	PF04930.10	gi|568163849|ref|YP_008947272.1|	-	0.0052	17.0	7.9	0.22	11.8	5.5	2.1	1	1	0	1	1	1	1	FUN14	family
MtrC	PF04211.8	gi|568163849|ref|YP_008947272.1|	-	0.023	13.7	11.7	0.027	13.5	8.1	1.1	1	0	0	1	1	1	0	Tetrahydromethanopterin	S-methyltransferase,	subunit	C
O-antigen_lig	PF13425.1	gi|568163849|ref|YP_008947272.1|	-	0.11	12.4	10.5	0.16	11.9	7.2	1.4	1	1	0	1	1	1	0	O-antigen	ligase	like	membrane	protein
MAGE	PF01454.14	gi|568163849|ref|YP_008947272.1|	-	0.16	11.2	0.1	0.18	11.1	0.1	1.1	1	0	0	1	1	1	0	MAGE	family
DUF4153	PF13687.1	gi|568163849|ref|YP_008947272.1|	-	0.19	11.2	10.2	0.07	12.6	4.2	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4153)
DUF2628	PF10947.3	gi|568163849|ref|YP_008947272.1|	-	0.68	9.7	3.0	1	9.2	2.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2628)
DUF4118	PF13493.1	gi|568163849|ref|YP_008947272.1|	-	1.5	9.0	11.0	2.5	8.3	7.7	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4118)
Ureide_permease	PF07168.6	gi|568163849|ref|YP_008947272.1|	-	1.7	7.2	6.6	1.9	7.0	4.3	1.3	1	1	0	1	1	1	0	Ureide	permease
Oxidored_q2	PF00420.19	gi|568163849|ref|YP_008947272.1|	-	2.1	7.9	8.3	3.7	7.2	5.8	1.5	1	1	0	1	1	1	0	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
DUF3487	PF11990.3	gi|568163849|ref|YP_008947272.1|	-	2.4	7.5	11.0	0.48	9.8	5.1	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3487)
VP7	PF00434.13	gi|568163849|ref|YP_008947272.1|	-	3	6.6	5.9	3.1	6.6	4.1	1.2	1	0	0	1	1	1	0	Glycoprotein	VP7
YuiB	PF14068.1	gi|568163849|ref|YP_008947272.1|	-	5.3	7.4	13.3	15	5.9	9.2	1.7	1	1	0	1	1	1	0	Putative	membrane	protein
ATPase_gene1	PF09527.5	gi|568163849|ref|YP_008947272.1|	-	5.4	6.8	13.8	11	5.9	0.1	2.5	2	1	0	2	2	2	0	Putative	F0F1-ATPase	subunit	(ATPase_gene1)
DUF1275	PF06912.6	gi|568163849|ref|YP_008947272.1|	-	6.8	5.8	11.3	14	4.8	7.8	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1275)
DUF4389	PF14333.1	gi|568163849|ref|YP_008947272.1|	-	7.8	6.2	10.7	6.7	6.5	5.4	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4389)
FtsX	PF02687.16	gi|568163849|ref|YP_008947272.1|	-	8.5	6.1	17.2	2.2e+02	1.6	11.9	2.4	1	1	0	1	1	1	0	FtsX-like	permease	family
Phage_Gp15	PF06854.6	gi|568163850|ref|YP_008947273.1|	-	0.7	9.3	9.7	5.4	6.4	6.7	2.0	1	1	0	1	1	1	0	Bacteriophage	Gp15	protein
CT47	PF15623.1	gi|568163850|ref|YP_008947273.1|	-	7.4	6.2	12.3	7.9	6.1	8.5	1.1	1	0	0	1	1	1	0	Cancer/testis	gene	family	47
TrmB	PF01978.14	gi|568163851|ref|YP_008947274.1|	-	1.3e-11	44.0	0.5	2.1e-11	43.3	0.3	1.4	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
TFIIE_alpha	PF02002.12	gi|568163851|ref|YP_008947274.1|	-	3e-09	36.3	1.8	3.6e-09	36.0	1.2	1.1	1	0	0	1	1	1	1	TFIIE	alpha	subunit
MarR_2	PF12802.2	gi|568163851|ref|YP_008947274.1|	-	3e-08	33.2	0.0	6.9e-08	32.0	0.0	1.6	2	0	0	2	2	1	1	MarR	family
HTH_24	PF13412.1	gi|568163851|ref|YP_008947274.1|	-	1.8e-06	27.2	0.4	3.7e-06	26.2	0.3	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.17	gi|568163851|ref|YP_008947274.1|	-	2.7e-06	26.9	0.2	5.5e-06	25.9	0.0	1.6	2	0	0	2	2	1	1	MarR	family
HTH_11	PF08279.7	gi|568163851|ref|YP_008947274.1|	-	1.3e-05	24.7	0.9	3.6e-05	23.3	0.2	1.9	2	0	0	2	2	2	1	HTH	domain
HTH_20	PF12840.2	gi|568163851|ref|YP_008947274.1|	-	3.5e-05	23.4	0.1	0.00022	20.9	0.0	1.9	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_27	PF13463.1	gi|568163851|ref|YP_008947274.1|	-	0.00012	22.3	0.6	0.00019	21.6	0.1	1.5	2	0	0	2	2	1	1	Winged	helix	DNA-binding	domain
HTH_5	PF01022.15	gi|568163851|ref|YP_008947274.1|	-	0.00015	21.3	0.1	0.00026	20.5	0.1	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_DeoR	PF08220.7	gi|568163851|ref|YP_008947274.1|	-	0.0002	20.8	0.7	0.00042	19.7	0.1	1.7	2	0	0	2	2	2	1	DeoR-like	helix-turn-helix	domain
GntR	PF00392.16	gi|568163851|ref|YP_008947274.1|	-	0.00024	20.4	1.1	0.0018	17.6	0.0	2.2	2	1	0	2	2	2	1	Bacterial	regulatory	proteins,	gntR	family
Fe_dep_repress	PF01325.14	gi|568163851|ref|YP_008947274.1|	-	0.00056	19.8	0.1	0.0013	18.5	0.1	1.7	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_Crp_2	PF13545.1	gi|568163851|ref|YP_008947274.1|	-	0.00087	19.0	0.0	0.0015	18.2	0.0	1.4	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
Replic_Relax	PF13814.1	gi|568163851|ref|YP_008947274.1|	-	0.0012	18.7	0.0	0.0015	18.4	0.0	1.1	1	0	0	1	1	1	1	Replication-relaxation
HTH_34	PF13601.1	gi|568163851|ref|YP_008947274.1|	-	0.0039	17.1	0.4	0.0097	15.9	0.1	1.7	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
Rrf2	PF02082.15	gi|568163851|ref|YP_008947274.1|	-	0.0055	16.7	0.1	0.0096	16.0	0.0	1.4	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_36	PF13730.1	gi|568163851|ref|YP_008947274.1|	-	0.0094	16.0	1.1	0.013	15.5	0.1	1.7	2	0	0	2	2	1	1	Helix-turn-helix	domain
HTH_6	PF01418.12	gi|568163851|ref|YP_008947274.1|	-	0.01	15.5	0.3	0.019	14.6	0.0	1.6	2	0	0	2	2	1	0	Helix-turn-helix	domain,	rpiR	family
EAP30	PF04157.11	gi|568163851|ref|YP_008947274.1|	-	0.011	14.9	0.2	0.097	11.8	0.0	2.0	2	0	0	2	2	2	0	EAP30/Vps36	family
FeoC	PF09012.5	gi|568163851|ref|YP_008947274.1|	-	0.011	15.4	0.0	0.019	14.6	0.0	1.4	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
Penicillinase_R	PF03965.11	gi|568163851|ref|YP_008947274.1|	-	0.014	15.4	0.4	0.024	14.7	0.0	1.6	2	0	0	2	2	1	0	Penicillinase	repressor
GerE	PF00196.14	gi|568163851|ref|YP_008947274.1|	-	0.016	14.4	0.0	0.031	13.6	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
Cullin	PF00888.17	gi|568163851|ref|YP_008947274.1|	-	0.017	13.6	1.6	0.37	9.2	0.1	2.0	1	1	1	2	2	2	0	Cullin	family
HTH_Mga	PF08280.6	gi|568163851|ref|YP_008947274.1|	-	0.021	14.5	0.1	0.043	13.5	0.1	1.5	1	0	0	1	1	1	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
TBPIP	PF07106.8	gi|568163851|ref|YP_008947274.1|	-	0.034	13.6	2.1	0.072	12.6	1.5	1.5	1	1	0	1	1	1	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
HTH_38	PF13936.1	gi|568163851|ref|YP_008947274.1|	-	0.036	13.6	0.0	0.086	12.4	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_IclR	PF09339.5	gi|568163851|ref|YP_008947274.1|	-	0.044	13.3	0.0	0.083	12.4	0.0	1.5	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
Sulfolobus_pRN	PF05584.6	gi|568163851|ref|YP_008947274.1|	-	0.051	13.5	0.1	0.094	12.6	0.1	1.4	1	0	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
PadR	PF03551.9	gi|568163851|ref|YP_008947274.1|	-	0.081	12.7	0.7	0.25	11.1	0.1	2.1	1	1	1	2	2	2	0	Transcriptional	regulator	PadR-like	family
HTH_10	PF04967.7	gi|568163851|ref|YP_008947274.1|	-	0.082	12.5	0.1	0.17	11.4	0.0	1.5	1	0	0	1	1	1	0	HTH	DNA	binding	domain
z-alpha	PF02295.12	gi|568163851|ref|YP_008947274.1|	-	0.099	12.4	0.1	0.2	11.4	0.1	1.6	1	0	0	1	1	1	0	Adenosine	deaminase	z-alpha	domain
Phage_pRha	PF09669.5	gi|568163851|ref|YP_008947274.1|	-	0.099	13.0	0.1	0.14	12.5	0.1	1.3	1	0	0	1	1	1	0	Phage	regulatory	protein	Rha	(Phage_pRha)
DUF4393	PF14337.1	gi|568163851|ref|YP_008947274.1|	-	0.11	11.9	0.4	0.13	11.7	0.3	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4393)
AviRa	PF11599.3	gi|568163851|ref|YP_008947274.1|	-	0.12	11.4	0.2	0.14	11.1	0.1	1.1	1	0	0	1	1	1	0	RRNA	methyltransferase	AviRa
RuvB_C	PF05491.8	gi|568163851|ref|YP_008947274.1|	-	0.12	12.0	0.1	0.34	10.5	0.0	1.7	2	0	0	2	2	2	0	Holliday	junction	DNA	helicase	ruvB	C-terminus
Put_DNA-bind_N	PF06971.8	gi|568163851|ref|YP_008947274.1|	-	0.15	11.8	1.5	0.25	11.1	0.5	1.8	2	0	0	2	2	2	0	Putative	DNA-binding	protein	N-terminus
HDV_ag	PF01517.13	gi|568163851|ref|YP_008947274.1|	-	0.19	11.3	2.5	0.22	11.1	1.0	1.6	1	1	1	2	2	2	0	Hepatitis	delta	virus	delta	antigen
DUF4423	PF14394.1	gi|568163851|ref|YP_008947274.1|	-	0.21	11.1	1.3	0.23	11.0	0.1	1.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4423)
Peripla_BP_2	PF01497.13	gi|568163852|ref|YP_008947275.1|	-	8e-20	70.9	0.4	1.1e-19	70.5	0.2	1.1	1	0	0	1	1	1	1	Periplasmic	binding	protein
FecCD	PF01032.13	gi|568163853|ref|YP_008947276.1|	-	6.4e-63	212.4	35.8	8e-63	212.1	24.8	1.0	1	0	0	1	1	1	1	FecCD	transport	family
ABC-3	PF00950.12	gi|568163853|ref|YP_008947276.1|	-	7.2e-06	25.4	28.7	1.3e-05	24.6	19.9	1.4	1	1	0	1	1	1	1	ABC	3	transport	family
ABC_tran	PF00005.22	gi|568163854|ref|YP_008947277.1|	-	1e-18	67.9	0.2	1.1e-17	64.6	0.2	2.1	1	1	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|568163854|ref|YP_008947277.1|	-	3.6e-16	59.9	2.0	9.9e-08	32.2	0.1	2.2	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|568163854|ref|YP_008947277.1|	-	6e-13	48.5	4.5	4.1e-06	26.2	0.6	2.1	1	1	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|568163854|ref|YP_008947277.1|	-	1.2e-10	41.0	5.2	9e-05	21.6	0.2	2.2	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|568163854|ref|YP_008947277.1|	-	1e-08	35.7	4.3	4.5e-08	33.6	3.0	1.8	1	1	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|568163854|ref|YP_008947277.1|	-	3.3e-05	23.7	0.3	5.6e-05	22.9	0.2	1.4	1	1	0	1	1	1	1	Archaeal	ATPase
AAA_29	PF13555.1	gi|568163854|ref|YP_008947277.1|	-	8.2e-05	22.0	0.0	0.00017	21.0	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
Adeno_IVa2	PF02456.10	gi|568163854|ref|YP_008947277.1|	-	8.2e-05	21.4	0.4	0.00011	20.9	0.3	1.5	1	1	0	1	1	1	1	Adenovirus	IVa2	protein
AAA_18	PF13238.1	gi|568163854|ref|YP_008947277.1|	-	0.00023	21.4	1.0	0.00068	19.9	0.7	1.8	1	1	0	1	1	1	1	AAA	domain
cobW	PF02492.14	gi|568163854|ref|YP_008947277.1|	-	0.00032	20.2	2.6	0.001	18.5	1.8	2.1	1	1	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_22	PF13401.1	gi|568163854|ref|YP_008947277.1|	-	0.00035	20.7	0.0	0.00058	20.0	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|568163854|ref|YP_008947277.1|	-	0.00072	19.0	0.2	0.00076	19.0	0.1	1.3	1	1	0	1	1	1	1	AAA-like	domain
T2SE	PF00437.15	gi|568163854|ref|YP_008947277.1|	-	0.001	18.0	0.2	0.0018	17.2	0.1	1.4	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
DUF258	PF03193.11	gi|568163854|ref|YP_008947277.1|	-	0.0016	17.6	0.1	0.0024	17.1	0.1	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_17	PF13207.1	gi|568163854|ref|YP_008947277.1|	-	0.0036	18.1	0.3	0.0074	17.0	0.2	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|568163854|ref|YP_008947277.1|	-	0.0038	17.2	0.0	0.0046	16.9	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
NACHT	PF05729.7	gi|568163854|ref|YP_008947277.1|	-	0.0045	16.6	0.2	0.011	15.4	0.2	1.5	1	0	0	1	1	1	1	NACHT	domain
AAA_14	PF13173.1	gi|568163854|ref|YP_008947277.1|	-	0.0046	16.8	1.5	0.02	14.8	1.0	2.2	1	1	0	1	1	1	1	AAA	domain
Miro	PF08477.8	gi|568163854|ref|YP_008947277.1|	-	0.0068	16.9	0.0	0.013	15.9	0.0	1.5	1	1	0	1	1	1	1	Miro-like	protein
FtsK_SpoIIIE	PF01580.13	gi|568163854|ref|YP_008947277.1|	-	0.0068	15.9	0.4	0.011	15.1	0.3	1.3	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
MobB	PF03205.9	gi|568163854|ref|YP_008947277.1|	-	0.011	15.3	0.5	0.034	13.8	0.1	1.9	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_19	PF13245.1	gi|568163854|ref|YP_008947277.1|	-	0.012	15.3	0.1	0.025	14.3	0.1	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
ABC_ATPase	PF09818.4	gi|568163854|ref|YP_008947277.1|	-	0.015	13.9	0.5	0.025	13.1	0.4	1.3	1	0	0	1	1	1	0	Predicted	ATPase	of	the	ABC	class
AAA_24	PF13479.1	gi|568163854|ref|YP_008947277.1|	-	0.022	14.3	2.3	0.057	13.0	0.3	2.2	3	0	0	3	3	2	0	AAA	domain
AAA_33	PF13671.1	gi|568163854|ref|YP_008947277.1|	-	0.022	14.6	0.0	0.049	13.4	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_30	PF13604.1	gi|568163854|ref|YP_008947277.1|	-	0.023	14.2	0.1	0.042	13.4	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
SbcCD_C	PF13558.1	gi|568163854|ref|YP_008947277.1|	-	0.025	14.4	0.1	0.23	11.4	0.1	2.1	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA	PF00004.24	gi|568163854|ref|YP_008947277.1|	-	0.028	14.6	0.2	0.055	13.6	0.2	1.7	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_13	PF13166.1	gi|568163854|ref|YP_008947277.1|	-	0.033	12.6	0.6	0.13	10.7	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
NB-ARC	PF00931.17	gi|568163854|ref|YP_008947277.1|	-	0.037	12.8	0.5	0.19	10.5	0.2	2.0	2	1	0	2	2	2	0	NB-ARC	domain
PIF1	PF05970.9	gi|568163854|ref|YP_008947277.1|	-	0.056	12.3	0.3	0.13	11.1	0.0	1.7	2	0	0	2	2	2	0	PIF1-like	helicase
NTPase_1	PF03266.10	gi|568163854|ref|YP_008947277.1|	-	0.057	13.1	4.6	0.4	10.3	0.3	2.3	2	0	0	2	2	2	0	NTPase
MMR_HSR1	PF01926.18	gi|568163854|ref|YP_008947277.1|	-	0.059	13.3	0.9	0.096	12.6	0.6	1.4	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_25	PF13481.1	gi|568163854|ref|YP_008947277.1|	-	0.062	12.7	0.2	0.16	11.3	0.0	1.7	2	1	0	2	2	2	0	AAA	domain
G-alpha	PF00503.15	gi|568163854|ref|YP_008947277.1|	-	0.062	11.9	0.1	0.16	10.5	0.1	1.6	1	1	1	2	2	2	0	G-protein	alpha	subunit
RNA_helicase	PF00910.17	gi|568163854|ref|YP_008947277.1|	-	0.078	13.1	0.2	0.29	11.3	0.0	2.0	2	1	0	2	2	2	0	RNA	helicase
DUF3584	PF12128.3	gi|568163854|ref|YP_008947277.1|	-	0.084	10.2	0.2	0.11	9.7	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
ATP_bind_1	PF03029.12	gi|568163854|ref|YP_008947277.1|	-	0.11	12.0	0.1	0.19	11.2	0.1	1.4	1	1	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
TrwB_AAD_bind	PF10412.4	gi|568163854|ref|YP_008947277.1|	-	0.12	10.9	0.0	0.18	10.3	0.0	1.2	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
AAA_5	PF07728.9	gi|568163854|ref|YP_008947277.1|	-	0.13	11.9	0.4	0.58	9.8	0.3	2.1	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
MraZ	PF02381.13	gi|568163854|ref|YP_008947277.1|	-	0.15	11.8	0.0	4.1	7.2	0.0	2.2	2	0	0	2	2	2	0	MraZ	protein
SRP54	PF00448.17	gi|568163854|ref|YP_008947277.1|	-	0.17	11.3	2.3	0.77	9.1	0.2	2.5	1	1	1	2	2	2	0	SRP54-type	protein,	GTPase	domain
AAA_11	PF13086.1	gi|568163854|ref|YP_008947277.1|	-	0.2	11.1	0.3	0.48	9.9	0.1	1.6	1	1	1	2	2	2	0	AAA	domain
TrmB	PF01978.14	gi|568163855|ref|YP_008947278.1|	-	5.4e-11	42.0	1.3	9e-11	41.3	0.9	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|568163855|ref|YP_008947278.1|	-	7e-09	35.2	0.0	1.2e-08	34.5	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_DeoR	PF08220.7	gi|568163855|ref|YP_008947278.1|	-	7.1e-08	31.8	0.5	6.2e-07	28.8	0.0	2.2	2	0	0	2	2	2	1	DeoR-like	helix-turn-helix	domain
TFIIE_alpha	PF02002.12	gi|568163855|ref|YP_008947278.1|	-	4.6e-07	29.3	3.4	5.9e-07	28.9	2.4	1.1	1	0	0	1	1	1	1	TFIIE	alpha	subunit
MarR	PF01047.17	gi|568163855|ref|YP_008947278.1|	-	6.2e-07	29.0	0.1	1e-06	28.3	0.1	1.4	1	0	0	1	1	1	1	MarR	family
GntR	PF00392.16	gi|568163855|ref|YP_008947278.1|	-	1e-06	28.0	0.6	1.8e-06	27.2	0.1	1.6	2	0	0	2	2	1	1	Bacterial	regulatory	proteins,	gntR	family
Fe_dep_repress	PF01325.14	gi|568163855|ref|YP_008947278.1|	-	2.9e-06	27.1	0.6	0.00017	21.4	0.4	2.5	1	1	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_24	PF13412.1	gi|568163855|ref|YP_008947278.1|	-	3.1e-06	26.4	1.1	5.4e-06	25.7	0.4	1.7	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_27	PF13463.1	gi|568163855|ref|YP_008947278.1|	-	3.6e-06	27.1	0.1	8.4e-06	26.0	0.0	1.6	2	0	0	2	2	1	1	Winged	helix	DNA-binding	domain
Rrf2	PF02082.15	gi|568163855|ref|YP_008947278.1|	-	3.8e-05	23.7	0.1	6.6e-05	22.9	0.0	1.4	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_5	PF01022.15	gi|568163855|ref|YP_008947278.1|	-	4.6e-05	22.9	0.1	7.7e-05	22.2	0.1	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|568163855|ref|YP_008947278.1|	-	5.5e-05	22.8	0.0	0.00011	21.8	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|568163855|ref|YP_008947278.1|	-	7e-05	22.3	1.1	0.00015	21.3	0.2	2.0	2	0	0	2	2	2	1	HTH	domain
HTH_34	PF13601.1	gi|568163855|ref|YP_008947278.1|	-	0.00011	22.1	0.4	0.00024	21.0	0.1	1.6	1	1	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_Crp_2	PF13545.1	gi|568163855|ref|YP_008947278.1|	-	0.00011	21.8	0.0	0.00021	21.0	0.0	1.6	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
Sulfolobus_pRN	PF05584.6	gi|568163855|ref|YP_008947278.1|	-	0.0003	20.6	0.2	0.00071	19.4	0.1	1.8	1	1	0	1	1	1	1	Sulfolobus	plasmid	regulatory	protein
FeoC	PF09012.5	gi|568163855|ref|YP_008947278.1|	-	0.00086	18.9	0.0	0.0021	17.7	0.0	1.6	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
UPF0122	PF04297.9	gi|568163855|ref|YP_008947278.1|	-	0.0014	18.5	3.7	0.018	15.0	2.5	2.1	1	1	0	1	1	1	1	Putative	helix-turn-helix	protein,	YlxM	/	p13	like
HxlR	PF01638.12	gi|568163855|ref|YP_008947278.1|	-	0.0018	17.8	0.3	0.0032	17.0	0.2	1.6	1	1	0	1	1	1	1	HxlR-like	helix-turn-helix
Cullin_Nedd8	PF10557.4	gi|568163855|ref|YP_008947278.1|	-	0.0097	15.7	5.0	0.063	13.1	0.1	2.9	3	0	0	3	3	3	1	Cullin	protein	neddylation	domain
DUF4423	PF14394.1	gi|568163855|ref|YP_008947278.1|	-	0.012	15.1	0.2	0.015	14.8	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
Sigma70_r4	PF04545.11	gi|568163855|ref|YP_008947278.1|	-	0.028	13.7	0.2	0.14	11.4	0.0	2.1	1	1	1	2	2	2	0	Sigma-70,	region	4
HTH_36	PF13730.1	gi|568163855|ref|YP_008947278.1|	-	0.029	14.5	1.4	0.034	14.2	0.1	1.8	2	0	0	2	2	2	0	Helix-turn-helix	domain
PadR	PF03551.9	gi|568163855|ref|YP_008947278.1|	-	0.032	13.9	0.1	0.063	13.0	0.1	1.4	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
HTH_41	PF14502.1	gi|568163855|ref|YP_008947278.1|	-	0.033	13.7	0.6	0.096	12.3	0.0	1.9	2	0	0	2	2	2	0	Helix-turn-helix	domain
RTP	PF02334.11	gi|568163855|ref|YP_008947278.1|	-	0.053	13.4	0.4	0.078	12.9	0.3	1.4	1	1	0	1	1	1	0	Replication	terminator	protein
Ribosomal_S13	PF00416.17	gi|568163855|ref|YP_008947278.1|	-	0.057	13.8	0.3	0.089	13.2	0.2	1.4	1	1	0	1	1	1	0	Ribosomal	protein	S13/S18
HTH_9	PF08221.6	gi|568163855|ref|YP_008947278.1|	-	0.057	13.2	0.1	0.18	11.7	0.0	1.8	2	0	0	2	2	2	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
LexA_DNA_bind	PF01726.11	gi|568163855|ref|YP_008947278.1|	-	0.072	12.6	0.1	0.14	11.7	0.1	1.4	1	0	0	1	1	1	0	LexA	DNA	binding	domain
B-block_TFIIIC	PF04182.7	gi|568163855|ref|YP_008947278.1|	-	0.086	12.6	0.0	0.16	11.8	0.0	1.6	1	1	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
Penicillinase_R	PF03965.11	gi|568163855|ref|YP_008947278.1|	-	0.11	12.6	0.1	0.19	11.8	0.1	1.6	1	1	0	1	1	1	0	Penicillinase	repressor
DUF910	PF06014.6	gi|568163855|ref|YP_008947278.1|	-	0.11	12.4	1.1	3.3	7.7	0.1	2.3	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF910)
MRP-L20	PF12824.2	gi|568163855|ref|YP_008947278.1|	-	0.11	12.4	0.1	0.14	12.0	0.1	1.2	1	0	0	1	1	1	0	Mitochondrial	ribosomal	protein	subunit	L20
DUF1198	PF06711.6	gi|568163855|ref|YP_008947278.1|	-	0.12	12.2	0.0	0.19	11.5	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1198)
Replic_Relax	PF13814.1	gi|568163855|ref|YP_008947278.1|	-	0.12	12.1	0.0	0.14	12.0	0.0	1.3	1	0	0	1	1	1	0	Replication-relaxation
HTH_6	PF01418.12	gi|568163855|ref|YP_008947278.1|	-	0.13	12.0	0.7	0.36	10.5	0.1	2.1	2	1	0	2	2	2	0	Helix-turn-helix	domain,	rpiR	family
Homeobox	PF00046.24	gi|568163855|ref|YP_008947278.1|	-	0.16	11.6	1.9	0.68	9.5	0.1	2.4	3	0	0	3	3	3	0	Homeobox	domain
Mga	PF05043.8	gi|568163855|ref|YP_008947278.1|	-	0.2	11.9	3.7	0.16	12.2	1.0	2.0	2	1	0	2	2	2	0	Mga	helix-turn-helix	domain
HTH_38	PF13936.1	gi|568163855|ref|YP_008947278.1|	-	0.21	11.1	0.8	0.92	9.1	0.0	2.3	3	0	0	3	3	3	0	Helix-turn-helix	domain
LSM	PF01423.17	gi|568163856|ref|YP_008947279.1|	-	1.8e-22	78.6	0.9	2e-22	78.4	0.6	1.0	1	0	0	1	1	1	1	LSM	domain
SM-ATX	PF14438.1	gi|568163856|ref|YP_008947279.1|	-	0.0032	17.3	0.2	0.0042	16.9	0.1	1.2	1	0	0	1	1	1	1	Ataxin	2	SM	domain
DUF3901	PF13040.1	gi|568163856|ref|YP_008947279.1|	-	0.11	11.8	0.1	0.18	11.1	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3901)
DUF469	PF04320.9	gi|568164860|ref|YP_008947281.1|	-	0.04	14.7	0.2	0.46	11.2	0.0	2.0	2	0	0	2	2	2	0	Protein	with	unknown	function	(DUF469)
FAD_binding_7	PF03441.9	gi|568163858|ref|YP_008947282.1|	-	8.5e-80	267.9	0.7	1.2e-79	267.4	0.5	1.2	1	0	0	1	1	1	1	FAD	binding	domain	of	DNA	photolyase
DNA_photolyase	PF00875.13	gi|568163858|ref|YP_008947282.1|	-	4.8e-29	101.2	0.1	5.3e-28	97.8	0.0	2.1	2	0	0	2	2	2	1	DNA	photolyase
AAA_22	PF13401.1	gi|568163859|ref|YP_008947283.1|	-	0.0003	20.9	0.3	0.0048	17.0	0.0	2.5	3	0	0	3	3	2	1	AAA	domain
AAA_15	PF13175.1	gi|568163859|ref|YP_008947283.1|	-	0.00071	18.7	0.5	0.00071	18.7	0.4	2.6	3	1	0	3	3	3	1	AAA	ATPase	domain
AAA_18	PF13238.1	gi|568163859|ref|YP_008947283.1|	-	0.0031	17.8	0.9	0.0073	16.6	0.1	2.1	2	1	0	2	2	2	1	AAA	domain
AAA_24	PF13479.1	gi|568163859|ref|YP_008947283.1|	-	0.0031	17.1	0.1	0.0062	16.1	0.1	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|568163859|ref|YP_008947283.1|	-	0.0044	17.8	0.2	0.02	15.7	0.2	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_30	PF13604.1	gi|568163859|ref|YP_008947283.1|	-	0.0074	15.8	0.0	0.013	15.0	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
ABC_tran	PF00005.22	gi|568163859|ref|YP_008947283.1|	-	0.0077	16.5	0.4	0.086	13.1	0.0	2.3	2	0	0	2	2	2	1	ABC	transporter
NB-ARC	PF00931.17	gi|568163859|ref|YP_008947283.1|	-	0.0088	14.9	0.0	0.02	13.7	0.0	1.5	1	0	0	1	1	1	1	NB-ARC	domain
Img2	PF05046.9	gi|568163859|ref|YP_008947283.1|	-	0.014	15.6	3.7	0.55	10.4	0.1	3.0	2	1	1	3	3	3	0	Mitochondrial	large	subunit	ribosomal	protein	(Img2)
NTPase_1	PF03266.10	gi|568163859|ref|YP_008947283.1|	-	0.022	14.4	0.2	0.022	14.4	0.2	2.3	3	0	0	3	3	3	0	NTPase
AAA_25	PF13481.1	gi|568163859|ref|YP_008947283.1|	-	0.028	13.8	0.1	0.079	12.3	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
AAA_16	PF13191.1	gi|568163859|ref|YP_008947283.1|	-	0.042	13.8	0.0	0.12	12.3	0.0	1.7	1	0	0	1	1	1	0	AAA	ATPase	domain
DUF258	PF03193.11	gi|568163859|ref|YP_008947283.1|	-	0.056	12.6	0.1	0.12	11.5	0.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
NEP	PF10167.4	gi|568163859|ref|YP_008947283.1|	-	0.064	12.9	0.6	0.16	11.6	0.4	1.6	1	0	0	1	1	1	0	Uncharacterised	conserved	protein
NACHT	PF05729.7	gi|568163859|ref|YP_008947283.1|	-	0.08	12.5	0.0	0.26	10.9	0.0	1.8	2	0	0	2	2	2	0	NACHT	domain
AAA	PF00004.24	gi|568163859|ref|YP_008947283.1|	-	0.09	12.9	1.2	0.45	10.7	0.8	2.2	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_19	PF13245.1	gi|568163859|ref|YP_008947283.1|	-	0.11	12.2	0.0	0.26	11.0	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
MarR	PF01047.17	gi|568163860|ref|YP_008947284.1|	-	0.003	17.2	0.0	0.0064	16.1	0.0	1.5	1	0	0	1	1	1	1	MarR	family
Rrf2	PF02082.15	gi|568163860|ref|YP_008947284.1|	-	0.028	14.5	0.0	0.047	13.8	0.0	1.3	1	0	0	1	1	1	0	Transcriptional	regulator
MarR_2	PF12802.2	gi|568163860|ref|YP_008947284.1|	-	0.041	13.5	0.0	0.08	12.6	0.0	1.4	1	0	0	1	1	1	0	MarR	family
HTH_27	PF13463.1	gi|568163860|ref|YP_008947284.1|	-	0.071	13.4	0.1	0.16	12.3	0.0	1.6	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
RPA_C	PF08784.6	gi|568163860|ref|YP_008947284.1|	-	0.074	13.4	0.0	0.14	12.5	0.0	1.4	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
TrmB	PF01978.14	gi|568163860|ref|YP_008947284.1|	-	0.09	12.4	0.7	0.22	11.2	0.1	2.0	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
DUF2250	PF10007.4	gi|568163860|ref|YP_008947284.1|	-	0.094	12.6	0.7	0.16	11.8	0.1	1.7	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
TENA_THI-4	PF03070.11	gi|568163861|ref|YP_008947285.1|	-	7.1e-39	133.7	0.9	8.1e-39	133.5	0.6	1.0	1	0	0	1	1	1	1	TENA/THI-4/PQQC	family
PTB	PF08416.8	gi|568163861|ref|YP_008947285.1|	-	0.021	14.7	0.1	0.57	10.0	0.0	2.1	2	0	0	2	2	2	0	Phosphotyrosine-binding	domain
DUF2029	PF09594.5	gi|568164861|ref|YP_008947286.1|	-	2.8e-05	23.7	2.1	2.8e-05	23.7	1.4	3.2	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF2029)
adh_short	PF00106.20	gi|568163862|ref|YP_008947287.1|	-	1.8e-34	119.0	0.2	2.5e-34	118.6	0.1	1.2	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|568163862|ref|YP_008947287.1|	-	3.1e-27	95.8	0.2	3.6e-27	95.6	0.1	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|568163862|ref|YP_008947287.1|	-	2.1e-12	47.0	0.2	3.5e-12	46.3	0.1	1.2	1	0	0	1	1	1	1	KR	domain
Polysacc_synt_2	PF02719.10	gi|568163862|ref|YP_008947287.1|	-	0.016	14.1	0.2	0.022	13.6	0.1	1.2	1	0	0	1	1	1	0	Polysaccharide	biosynthesis	protein
HAD	PF12710.2	gi|568163862|ref|YP_008947287.1|	-	0.059	13.5	0.2	0.09	12.9	0.1	1.7	1	1	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
Epimerase	PF01370.16	gi|568163862|ref|YP_008947287.1|	-	0.072	12.5	0.2	0.18	11.2	0.2	1.9	1	1	0	1	1	1	0	NAD	dependent	epimerase/dehydratase	family
DUF488	PF04343.8	gi|568164862|ref|YP_008947288.1|	-	0.0004	20.7	0.0	0.00041	20.7	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF488
Cupin_2	PF07883.6	gi|568163863|ref|YP_008947289.1|	-	6.7e-19	67.1	0.2	1.1e-18	66.5	0.1	1.3	1	0	0	1	1	1	1	Cupin	domain
MannoseP_isomer	PF01050.13	gi|568163863|ref|YP_008947289.1|	-	2.6e-07	30.3	0.1	3e-07	30.1	0.1	1.1	1	0	0	1	1	1	1	Mannose-6-phosphate	isomerase
Auxin_BP	PF02041.11	gi|568163863|ref|YP_008947289.1|	-	4.5e-07	29.4	0.1	1.2e-06	28.1	0.0	1.6	1	1	0	1	1	1	1	Auxin	binding	protein
AraC_binding	PF02311.14	gi|568163863|ref|YP_008947289.1|	-	1.2e-06	28.2	0.0	1.5e-06	27.9	0.0	1.1	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
Cupin_1	PF00190.17	gi|568163863|ref|YP_008947289.1|	-	6.6e-06	25.6	0.1	1.5e-05	24.4	0.0	1.6	1	1	0	1	1	1	1	Cupin
Cupin_3	PF05899.7	gi|568163863|ref|YP_008947289.1|	-	0.0013	18.0	0.1	0.005	16.1	0.0	2.0	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF861)
Ectoine_synth	PF06339.7	gi|568163863|ref|YP_008947289.1|	-	0.014	15.3	0.0	0.018	14.9	0.0	1.1	1	0	0	1	1	1	0	Ectoine	synthase
JmjC	PF02373.17	gi|568163863|ref|YP_008947289.1|	-	0.11	12.7	0.0	0.2	11.9	0.0	1.5	1	1	0	1	1	1	0	JmjC	domain,	hydroxylase
Tail_P2_I	PF09684.5	gi|568163864|ref|YP_008947290.1|	-	0.039	13.4	0.0	0.049	13.1	0.0	1.3	1	1	0	1	1	1	0	Phage	tail	protein	(Tail_P2_I)
Rsd_AlgQ	PF04353.8	gi|568163864|ref|YP_008947290.1|	-	0.059	13.0	0.2	0.063	12.9	0.1	1.1	1	0	0	1	1	1	0	Regulator	of	RNA	polymerase	sigma(70)	subunit,	Rsd/AlgQ
PIN	PF01850.16	gi|568163865|ref|YP_008947291.1|	-	7.8e-11	42.3	0.1	9.5e-11	42.0	0.1	1.1	1	0	0	1	1	1	1	PIN	domain
PIN_3	PF13470.1	gi|568163865|ref|YP_008947291.1|	-	0.00024	21.7	0.0	0.00027	21.5	0.0	1.3	1	1	0	1	1	1	1	PIN	domain
Phage_int_SAM_3	PF14659.1	gi|568163865|ref|YP_008947291.1|	-	0.14	12.4	1.8	0.2	11.9	0.2	1.9	2	0	0	2	2	2	0	Phage	integrase,	N-terminal	SAM-like	domain
Chaperone_III	PF07824.7	gi|568163866|ref|YP_008947292.1|	-	0.12	12.3	0.0	0.14	12.0	0.0	1.1	1	0	0	1	1	1	0	Type	III	secretion	chaperone	domain
UPF0126	PF03458.8	gi|568163867|ref|YP_008947293.1|	-	1.9e-44	149.1	23.2	3e-24	84.4	4.6	2.4	3	0	0	3	3	3	2	UPF0126	domain
TPR_11	PF13414.1	gi|568163868|ref|YP_008947294.1|	-	3.6e-32	109.8	15.9	7.7e-15	54.3	0.9	4.8	3	1	2	5	5	5	3	TPR	repeat
TPR_2	PF07719.12	gi|568163868|ref|YP_008947294.1|	-	8.6e-24	81.5	16.0	1.5e-05	24.5	0.1	7.9	8	0	0	8	8	8	4	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|568163868|ref|YP_008947294.1|	-	2.3e-20	72.6	4.3	1.6e-06	28.5	0.0	4.9	3	2	2	5	5	5	3	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|568163868|ref|YP_008947294.1|	-	5.7e-20	70.0	24.3	1.6e-06	27.4	0.3	7.0	8	0	0	8	8	7	4	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|568163868|ref|YP_008947294.1|	-	8e-17	59.6	24.5	4.2e-05	23.0	0.6	6.2	5	1	1	6	6	6	4	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|568163868|ref|YP_008947294.1|	-	2.4e-16	58.5	10.3	3.7e-05	23.5	0.1	5.7	5	1	1	6	6	6	3	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|568163868|ref|YP_008947294.1|	-	7.1e-14	51.5	12.6	0.0005	19.9	0.5	5.3	2	2	3	5	5	5	4	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|568163868|ref|YP_008947294.1|	-	1.3e-12	47.8	13.6	0.00011	22.4	0.3	5.3	3	2	2	5	5	5	3	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|568163868|ref|YP_008947294.1|	-	6e-11	41.9	1.1	1.7	9.4	0.1	6.2	5	1	1	6	6	6	3	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|568163868|ref|YP_008947294.1|	-	5.2e-08	32.1	4.5	0.082	12.7	0.7	5.5	4	1	0	4	4	4	1	Tetratricopeptide	repeat
NARP1	PF12569.3	gi|568163868|ref|YP_008947294.1|	-	1.1e-07	31.0	5.1	0.0089	14.8	0.0	3.4	1	1	1	3	3	3	3	NMDA	receptor-regulated	protein	1
TPR_21	PF09976.4	gi|568163868|ref|YP_008947294.1|	-	3.2e-07	30.3	1.2	0.058	13.3	0.0	4.1	3	2	2	5	5	5	2	Tetratricopeptide	repeat
TPR_9	PF13371.1	gi|568163868|ref|YP_008947294.1|	-	3.3e-07	30.0	0.2	0.24	11.2	0.0	5.5	3	3	2	6	6	6	1	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|568163868|ref|YP_008947294.1|	-	5.2e-06	26.5	7.6	0.92	9.6	0.0	3.8	2	2	1	3	3	3	3	Anaphase-promoting	complex,	cyclosome,	subunit	3
FAT	PF02259.18	gi|568163868|ref|YP_008947294.1|	-	7.1e-05	21.9	0.1	0.13	11.2	0.0	2.3	2	0	0	2	2	2	2	FAT	domain
DUF3366	PF11846.3	gi|568163868|ref|YP_008947294.1|	-	8e-05	22.6	0.3	0.14	12.0	0.1	2.1	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF3366)
Coatomer_E	PF04733.9	gi|568163868|ref|YP_008947294.1|	-	0.00028	20.1	0.5	0.00028	20.1	0.3	2.0	2	1	0	2	2	2	1	Coatomer	epsilon	subunit
MIT	PF04212.13	gi|568163868|ref|YP_008947294.1|	-	0.00044	20.0	6.3	0.0064	16.3	1.0	3.7	2	2	0	2	2	2	1	MIT	(microtubule	interacting	and	transport)	domain
TPR_6	PF13174.1	gi|568163868|ref|YP_008947294.1|	-	0.00059	20.1	17.1	2.2	8.9	0.2	6.4	7	1	1	8	8	6	2	Tetratricopeptide	repeat
TPR_10	PF13374.1	gi|568163868|ref|YP_008947294.1|	-	0.00072	19.4	1.6	0.47	10.4	0.2	3.9	2	1	1	3	3	3	1	Tetratricopeptide	repeat
TPR_20	PF14561.1	gi|568163868|ref|YP_008947294.1|	-	0.031	14.4	0.7	4.7	7.3	0.2	3.8	3	1	1	4	4	4	0	Tetratricopeptide	repeat
ATP-synt_F	PF01990.12	gi|568163868|ref|YP_008947294.1|	-	0.034	14.5	0.8	0.11	12.9	0.6	1.9	1	1	0	1	1	1	0	ATP	synthase	(F/14-kDa)	subunit
Clathrin	PF00637.15	gi|568163868|ref|YP_008947294.1|	-	0.036	13.6	8.0	0.031	13.8	2.2	2.7	2	1	0	2	2	2	0	Region	in	Clathrin	and	VPS
DUF3856	PF12968.2	gi|568163868|ref|YP_008947294.1|	-	0.041	13.7	2.5	24	4.7	0.0	3.7	1	1	3	4	4	4	0	Domain	of	Unknown	Function	(DUF3856)
DUF1296	PF06972.6	gi|568163868|ref|YP_008947294.1|	-	0.047	13.6	0.4	26	4.8	0.0	3.6	3	1	1	4	4	4	0	Protein	of	unknown	function	(DUF1296)
ATP-synt_DE	PF00401.15	gi|568163868|ref|YP_008947294.1|	-	0.37	10.7	4.4	3.2	7.6	0.4	3.1	3	0	0	3	3	2	0	ATP	synthase,	Delta/Epsilon	chain,	long	alpha-helix	domain
DAO	PF01266.19	gi|568163869|ref|YP_008947295.1|	-	2.1e-11	43.3	0.0	0.00014	20.8	0.0	2.3	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|568163869|ref|YP_008947295.1|	-	2.3e-09	37.1	0.2	5.2e-09	36.0	0.2	1.6	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox	PF00070.22	gi|568163869|ref|YP_008947295.1|	-	2.6e-08	34.1	4.4	0.00011	22.4	0.6	2.7	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|568163869|ref|YP_008947295.1|	-	9.1e-07	27.6	1.7	0.00081	17.9	0.5	2.1	2	0	0	2	2	2	2	HI0933-like	protein
Amino_oxidase	PF01593.19	gi|568163869|ref|YP_008947295.1|	-	3.5e-06	26.3	0.0	0.027	13.5	0.0	2.3	2	0	0	2	2	2	2	Flavin	containing	amine	oxidoreductase
GDI	PF00996.13	gi|568163869|ref|YP_008947295.1|	-	1.5e-05	23.4	0.7	0.057	11.7	0.0	2.2	2	0	0	2	2	2	2	GDP	dissociation	inhibitor
FAD_binding_2	PF00890.19	gi|568163869|ref|YP_008947295.1|	-	2.6e-05	23.2	1.0	0.019	13.8	0.7	2.1	2	0	0	2	2	2	2	FAD	binding	domain
Thi4	PF01946.12	gi|568163869|ref|YP_008947295.1|	-	0.0001	21.4	2.4	0.0065	15.5	0.2	2.2	2	0	0	2	2	2	1	Thi4	family
FAD_binding_3	PF01494.14	gi|568163869|ref|YP_008947295.1|	-	0.00056	19.0	0.5	0.00085	18.4	0.4	1.2	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox_3	PF13738.1	gi|568163869|ref|YP_008947295.1|	-	0.0017	18.4	0.3	0.055	13.5	0.2	2.2	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_oxidored	PF12831.2	gi|568163869|ref|YP_008947295.1|	-	0.003	16.6	0.9	0.003	16.6	0.6	2.0	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
UDPG_MGDP_dh_N	PF03721.9	gi|568163869|ref|YP_008947295.1|	-	0.0032	16.8	0.1	0.006	15.9	0.1	1.4	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Pyr_redox_2	PF07992.9	gi|568163869|ref|YP_008947295.1|	-	0.0053	16.6	0.1	0.024	14.5	0.0	2.1	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_10	PF13460.1	gi|568163869|ref|YP_008947295.1|	-	0.009	16.0	2.6	0.7	9.8	0.1	2.2	2	0	0	2	2	2	1	NADH(P)-binding
3HCDH_N	PF02737.13	gi|568163869|ref|YP_008947295.1|	-	0.01	15.5	3.1	0.95	9.0	0.3	2.4	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
GIDA	PF01134.17	gi|568163869|ref|YP_008947295.1|	-	0.017	13.9	4.5	0.029	13.2	0.3	2.5	3	0	0	3	3	3	0	Glucose	inhibited	division	protein	A
CUE	PF02845.11	gi|568163869|ref|YP_008947295.1|	-	0.029	13.8	0.1	0.067	12.7	0.1	1.7	1	0	0	1	1	1	0	CUE	domain
NAD_binding_7	PF13241.1	gi|568163869|ref|YP_008947295.1|	-	0.036	14.3	0.3	0.098	12.9	0.0	1.9	2	0	0	2	2	2	0	Putative	NAD(P)-binding
XdhC_C	PF13478.1	gi|568163869|ref|YP_008947295.1|	-	0.14	12.4	0.2	4.3	7.6	0.0	2.3	2	0	0	2	2	2	0	XdhC	Rossmann	domain
Trp_halogenase	PF04820.9	gi|568163869|ref|YP_008947295.1|	-	0.18	10.3	4.8	0.19	10.3	0.2	2.1	2	0	0	2	2	2	0	Tryptophan	halogenase
Lycopene_cycl	PF05834.7	gi|568163869|ref|YP_008947295.1|	-	0.22	10.4	0.5	0.36	9.7	0.4	1.3	1	0	0	1	1	1	0	Lycopene	cyclase	protein
4HBT	PF03061.17	gi|568163870|ref|YP_008947296.1|	-	2.8e-15	56.1	0.1	4e-15	55.7	0.1	1.2	1	0	0	1	1	1	1	Thioesterase	superfamily
4HBT_3	PF13622.1	gi|568163870|ref|YP_008947296.1|	-	0.0027	17.4	0.0	0.0036	17.1	0.0	1.1	1	0	0	1	1	1	1	Thioesterase-like	superfamily
TrmB	PF01978.14	gi|568163871|ref|YP_008947297.1|	-	1.1e-10	41.1	0.1	1.6e-10	40.5	0.1	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_27	PF13463.1	gi|568163871|ref|YP_008947297.1|	-	2.7e-07	30.7	0.2	4.1e-07	30.2	0.1	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR	PF01047.17	gi|568163871|ref|YP_008947297.1|	-	6.4e-07	28.9	1.4	1e-06	28.3	1.0	1.4	1	0	0	1	1	1	1	MarR	family
TFIIE_alpha	PF02002.12	gi|568163871|ref|YP_008947297.1|	-	1.2e-06	27.9	0.6	1.5e-06	27.6	0.4	1.2	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HTH_11	PF08279.7	gi|568163871|ref|YP_008947297.1|	-	2.7e-06	26.9	0.6	4.6e-06	26.1	0.4	1.4	1	0	0	1	1	1	1	HTH	domain
HTH_Crp_2	PF13545.1	gi|568163871|ref|YP_008947297.1|	-	3.3e-05	23.5	0.0	5.4e-05	22.8	0.0	1.4	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
GntR	PF00392.16	gi|568163871|ref|YP_008947297.1|	-	0.0001	21.6	0.0	0.00018	20.8	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HTH_5	PF01022.15	gi|568163871|ref|YP_008947297.1|	-	0.00012	21.6	0.2	0.00019	20.9	0.2	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
MarR_2	PF12802.2	gi|568163871|ref|YP_008947297.1|	-	0.00014	21.4	0.0	0.0002	20.9	0.0	1.2	1	0	0	1	1	1	1	MarR	family
HTH_DeoR	PF08220.7	gi|568163871|ref|YP_008947297.1|	-	0.0002	20.8	0.4	0.00035	20.0	0.3	1.4	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
DUF387	PF04079.11	gi|568163871|ref|YP_008947297.1|	-	0.00026	20.4	0.1	0.00033	20.0	0.0	1.1	1	0	0	1	1	1	1	Putative	transcriptional	regulators	(Ypuh-like)
HTH_24	PF13412.1	gi|568163871|ref|YP_008947297.1|	-	0.00026	20.3	0.7	0.0005	19.4	0.5	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
Fe_dep_repress	PF01325.14	gi|568163871|ref|YP_008947297.1|	-	0.00029	20.6	0.4	0.00055	19.8	0.3	1.5	1	1	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DUF4423	PF14394.1	gi|568163871|ref|YP_008947297.1|	-	0.00031	20.3	0.0	0.00036	20.1	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
PadR	PF03551.9	gi|568163871|ref|YP_008947297.1|	-	0.0005	19.7	0.2	0.00083	19.0	0.1	1.3	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
Rrf2	PF02082.15	gi|568163871|ref|YP_008947297.1|	-	0.0062	16.6	0.1	0.0095	16.0	0.1	1.3	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_20	PF12840.2	gi|568163871|ref|YP_008947297.1|	-	0.008	15.9	0.1	0.013	15.2	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
Phage_rep_O	PF04492.8	gi|568163871|ref|YP_008947297.1|	-	0.0082	16.3	0.1	0.014	15.6	0.1	1.4	1	0	0	1	1	1	1	Bacteriophage	replication	protein	O
HrcA_DNA-bdg	PF03444.10	gi|568163871|ref|YP_008947297.1|	-	0.0084	15.5	0.4	0.014	14.8	0.3	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
DUF2250	PF10007.4	gi|568163871|ref|YP_008947297.1|	-	0.012	15.4	0.7	0.018	14.9	0.4	1.5	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
B-block_TFIIIC	PF04182.7	gi|568163871|ref|YP_008947297.1|	-	0.014	15.1	0.2	0.022	14.6	0.1	1.4	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
EAP30	PF04157.11	gi|568163871|ref|YP_008947297.1|	-	0.016	14.3	0.2	0.021	13.9	0.1	1.2	1	0	0	1	1	1	0	EAP30/Vps36	family
FeoC	PF09012.5	gi|568163871|ref|YP_008947297.1|	-	0.017	14.8	0.2	0.027	14.1	0.1	1.3	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
Sulfolobus_pRN	PF05584.6	gi|568163871|ref|YP_008947297.1|	-	0.018	14.9	0.5	0.033	14.1	0.3	1.5	1	0	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
DDRGK	PF09756.4	gi|568163871|ref|YP_008947297.1|	-	0.021	14.2	0.4	0.028	13.8	0.3	1.2	1	0	0	1	1	1	0	DDRGK	domain
Tfb2	PF03849.9	gi|568163871|ref|YP_008947297.1|	-	0.022	13.4	0.1	0.024	13.2	0.1	1.0	1	0	0	1	1	1	0	Transcription	factor	Tfb2
HTH_10	PF04967.7	gi|568163871|ref|YP_008947297.1|	-	0.033	13.7	0.1	0.057	13.0	0.1	1.4	1	0	0	1	1	1	0	HTH	DNA	binding	domain
Phage_rep_org_N	PF09681.5	gi|568163871|ref|YP_008947297.1|	-	0.038	13.5	0.5	0.048	13.2	0.3	1.3	1	1	0	1	1	1	0	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
Penicillinase_R	PF03965.11	gi|568163871|ref|YP_008947297.1|	-	0.046	13.8	0.4	0.07	13.2	0.3	1.5	1	1	0	1	1	1	0	Penicillinase	repressor
Ribosomal_S25	PF03297.10	gi|568163871|ref|YP_008947297.1|	-	0.056	13.4	1.2	0.06	13.3	0.2	1.6	2	0	0	2	2	1	0	S25	ribosomal	protein
DUF2513	PF10711.4	gi|568163871|ref|YP_008947297.1|	-	0.067	13.2	0.2	0.11	12.5	0.1	1.4	1	1	0	1	1	1	0	Hypothetical	protein	(DUF2513)
HTH_36	PF13730.1	gi|568163871|ref|YP_008947297.1|	-	0.068	13.3	0.1	0.1	12.7	0.1	1.4	1	1	0	1	1	1	0	Helix-turn-helix	domain
HTH_34	PF13601.1	gi|568163871|ref|YP_008947297.1|	-	0.076	13.0	0.2	0.12	12.4	0.1	1.3	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
GLTP	PF08718.6	gi|568163872|ref|YP_008947298.1|	-	0.064	13.2	0.8	0.11	12.5	0.1	1.6	1	1	1	2	2	2	0	Glycolipid	transfer	protein	(GLTP)
Fis1_TPR_C	PF14853.1	gi|568163872|ref|YP_008947298.1|	-	0.08	12.8	1.0	0.32	10.8	0.2	2.5	2	2	1	3	3	3	0	Fis1	C-terminal	tetratricopeptide	repeat
Tex_N	PF09371.5	gi|568163872|ref|YP_008947298.1|	-	0.098	11.9	3.1	0.15	11.3	1.4	1.8	1	1	1	2	2	2	0	Tex-like	protein	N-terminal	domain
AAA_23	PF13476.1	gi|568163872|ref|YP_008947298.1|	-	0.12	12.7	2.8	0.15	12.3	1.9	1.2	1	0	0	1	1	1	0	AAA	domain
NAD_synthase	PF02540.12	gi|568163872|ref|YP_008947298.1|	-	0.61	8.9	5.1	0.13	11.1	0.6	1.8	2	0	0	2	2	2	0	NAD	synthase
GHMP_kinases_N	PF00288.21	gi|568163873|ref|YP_008947299.1|	-	2.7e-14	52.9	0.5	1e-13	51.0	0.1	2.1	3	0	0	3	3	3	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|568163873|ref|YP_008947299.1|	-	0.0024	18.0	0.1	0.0069	16.5	0.0	1.8	2	0	0	2	2	2	1	GHMP	kinases	C	terminal
Hjc	PF01870.13	gi|568163873|ref|YP_008947299.1|	-	0.092	12.3	0.5	9.5	5.9	0.0	2.4	2	0	0	2	2	2	0	Archaeal	holliday	junction	resolvase	(hjc)
GHMP_kinases_N	PF00288.21	gi|568163874|ref|YP_008947300.1|	-	6.1e-11	42.2	1.1	1.2e-10	41.2	0.8	1.4	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
MethyltransfD12	PF02086.10	gi|568163874|ref|YP_008947300.1|	-	0.074	12.4	0.2	0.17	11.3	0.0	1.6	2	0	0	2	2	2	0	D12	class	N6	adenine-specific	DNA	methyltransferase
malic	PF00390.14	gi|568163874|ref|YP_008947300.1|	-	0.14	11.7	0.3	1.1	8.8	0.1	2.2	3	0	0	3	3	3	0	Malic	enzyme,	N-terminal	domain
HD	PF01966.17	gi|568163875|ref|YP_008947301.1|	-	2.7e-14	53.2	0.0	6.8e-14	51.9	0.0	1.8	1	0	0	1	1	1	1	HD	domain
HDOD	PF08668.7	gi|568163875|ref|YP_008947301.1|	-	0.0021	17.3	0.0	0.0037	16.5	0.0	1.5	1	0	0	1	1	1	1	HDOD	domain
PNP_UDP_1	PF01048.15	gi|568163876|ref|YP_008947302.1|	-	4.3e-39	133.8	0.0	5.4e-39	133.5	0.0	1.1	1	0	0	1	1	1	1	Phosphorylase	superfamily
DUF711	PF05167.7	gi|568163876|ref|YP_008947302.1|	-	0.024	13.3	0.0	0.035	12.8	0.0	1.3	1	0	0	1	1	1	0	Uncharacterised	ACR	(DUF711)
DUF334	PF03904.8	gi|568163876|ref|YP_008947302.1|	-	0.16	11.3	0.3	0.52	9.5	0.0	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF334)
PapC_N	PF13954.1	gi|568163877|ref|YP_008947303.1|	-	0.14	11.7	0.0	0.14	11.7	0.0	1.1	1	0	0	1	1	1	0	PapC	N-terminal	domain
Glycos_transf_1	PF00534.15	gi|568163878|ref|YP_008947304.1|	-	3.5e-35	120.9	0.2	5e-35	120.4	0.2	1.2	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|568163878|ref|YP_008947304.1|	-	1.1e-11	45.0	0.0	3.1e-11	43.5	0.0	1.7	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|568163878|ref|YP_008947304.1|	-	5.2e-07	29.8	0.0	1.1e-06	28.7	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_20	PF00982.16	gi|568163878|ref|YP_008947304.1|	-	0.00085	17.9	1.0	0.01	14.3	0.7	2.1	1	1	1	2	2	2	1	Glycosyltransferase	family	20
RRM_2	PF04059.7	gi|568163878|ref|YP_008947304.1|	-	0.0096	15.9	0.2	0.11	12.4	0.1	2.6	3	0	0	3	3	3	1	RNA	recognition	motif	2
Glyco_hydro_15	PF00723.16	gi|568163879|ref|YP_008947305.1|	-	9e-45	153.0	0.0	4.1e-44	150.8	0.1	1.7	1	1	1	2	2	2	1	Glycosyl	hydrolases	family	15
DUF1237	PF06824.6	gi|568163879|ref|YP_008947305.1|	-	0.002	16.8	0.1	0.0093	14.6	0.0	2.0	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF1237)
TPR_19	PF14559.1	gi|568163879|ref|YP_008947305.1|	-	0.051	13.9	0.0	0.16	12.3	0.0	1.8	1	0	0	1	1	1	0	Tetratricopeptide	repeat
Serpin	PF00079.15	gi|568163879|ref|YP_008947305.1|	-	0.11	11.6	0.0	0.18	10.8	0.0	1.3	1	0	0	1	1	1	0	Serpin	(serine	protease	inhibitor)
Git3_C	PF11970.3	gi|568163880|ref|YP_008947306.1|	-	0.15	11.8	0.1	0.15	11.8	0.1	2.0	2	1	0	2	2	2	0	G	protein-coupled	glucose	receptor	regulating	Gpa2	C-term
GWT1	PF06423.7	gi|568163880|ref|YP_008947306.1|	-	1.1	9.3	7.1	0.56	10.2	2.7	1.9	1	1	1	2	2	2	0	GWT1
DUF21	PF01595.15	gi|568163880|ref|YP_008947306.1|	-	2.5	7.3	10.2	9.9	5.4	7.1	1.9	1	1	0	1	1	1	0	Domain	of	unknown	function	DUF21
Macro	PF01661.16	gi|568163881|ref|YP_008947307.1|	-	7.9e-37	125.7	0.0	9.9e-37	125.4	0.0	1.1	1	0	0	1	1	1	1	Macro	domain
Lactamase_B	PF00753.22	gi|568163882|ref|YP_008947308.1|	-	2.7e-05	23.9	5.8	0.00032	20.4	4.0	2.1	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|568163882|ref|YP_008947308.1|	-	0.0067	15.9	0.0	0.01	15.3	0.0	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
FMN_red	PF03358.10	gi|568163883|ref|YP_008947310.1|	-	4.1e-40	136.7	0.0	5.4e-40	136.3	0.0	1.1	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.12	gi|568163883|ref|YP_008947310.1|	-	1.9e-07	30.7	0.0	2.5e-07	30.4	0.0	1.3	1	0	0	1	1	1	1	Flavodoxin-like	fold
DUF1987	PF09345.5	gi|568163883|ref|YP_008947310.1|	-	0.006	16.3	0.1	0.011	15.5	0.1	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1987)
MFS_1	PF07690.11	gi|568163884|ref|YP_008947311.1|	-	1.8e-35	122.2	49.9	1.3e-20	73.4	19.9	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_1_like	PF12832.2	gi|568163884|ref|YP_008947311.1|	-	0.0034	17.1	16.4	0.15	11.8	0.1	4.8	4	1	0	4	4	4	2	MFS_1	like	family
4HBT_2	PF13279.1	gi|568163885|ref|YP_008947312.1|	-	3.5e-08	33.9	0.0	4.2e-08	33.6	0.0	1.1	1	0	0	1	1	1	1	Thioesterase-like	superfamily
4HBT	PF03061.17	gi|568163885|ref|YP_008947312.1|	-	3.8e-07	30.1	0.0	5.4e-07	29.6	0.0	1.3	1	0	0	1	1	1	1	Thioesterase	superfamily
NTP_transferase	PF00483.18	gi|568163886|ref|YP_008947314.1|	-	4.3e-33	114.6	0.0	5e-33	114.4	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|568163886|ref|YP_008947314.1|	-	9.3e-10	38.8	0.0	1.2e-09	38.4	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.14	gi|568163886|ref|YP_008947314.1|	-	0.0016	17.9	0.0	0.0033	16.9	0.0	1.5	2	0	0	2	2	2	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
DNA_binding_1	PF01035.15	gi|568163887|ref|YP_008947315.1|	-	2.8e-26	91.0	0.0	3.5e-26	90.7	0.0	1.1	1	0	0	1	1	1	1	6-O-methylguanine	DNA	methyltransferase,	DNA	binding	domain
Methyltransf_1N	PF02870.10	gi|568163887|ref|YP_008947315.1|	-	0.033	14.7	0.0	0.22	12.1	0.0	2.2	1	1	0	1	1	1	0	6-O-methylguanine	DNA	methyltransferase,	ribonuclease-like	domain
Sigma70_r4_2	PF08281.7	gi|568163887|ref|YP_008947315.1|	-	0.038	13.4	0.0	0.069	12.6	0.0	1.4	1	0	0	1	1	1	0	Sigma-70,	region	4
tRNA-synt_2b	PF00587.20	gi|568163888|ref|YP_008947316.1|	-	1.4e-39	135.4	0.1	2.2e-39	134.7	0.1	1.3	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|568163888|ref|YP_008947316.1|	-	1.2e-18	66.8	1.8	5.4e-18	64.7	0.7	2.2	2	0	0	2	2	2	1	Anticodon	binding	domain
Glyco_tran_28_C	PF04101.11	gi|568163889|ref|YP_008947317.1|	-	1.5e-11	44.2	0.0	2.8e-11	43.3	0.0	1.5	1	0	0	1	1	1	1	Glycosyltransferase	family	28	C-terminal	domain
Glyco_trans_1_3	PF13528.1	gi|568163889|ref|YP_008947317.1|	-	2.9e-08	33.3	0.0	1.4e-07	31.0	0.0	1.8	2	0	0	2	2	2	1	Glycosyl	transferase	family	1
Alg14	PF08660.6	gi|568163889|ref|YP_008947317.1|	-	0.031	14.2	0.0	0.18	11.7	0.0	2.1	1	1	0	1	1	1	0	Oligosaccharide	biosynthesis	protein	Alg14	like
HhH-GPD	PF00730.20	gi|568163890|ref|YP_008947318.1|	-	6.1e-11	42.5	0.0	8.9e-11	42.0	0.0	1.2	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
DUF4332	PF14229.1	gi|568163890|ref|YP_008947318.1|	-	0.00031	20.6	0.3	0.0015	18.4	0.3	1.9	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4332)
HHH_5	PF14520.1	gi|568163890|ref|YP_008947318.1|	-	0.00033	20.7	3.5	0.017	15.3	2.4	2.7	1	1	0	1	1	1	1	Helix-hairpin-helix	domain
HHH	PF00633.18	gi|568163890|ref|YP_008947318.1|	-	0.0062	16.1	0.2	0.046	13.4	0.0	2.4	2	0	0	2	2	2	1	Helix-hairpin-helix	motif
Sec63	PF02889.11	gi|568163890|ref|YP_008947318.1|	-	0.019	14.1	0.1	0.028	13.6	0.1	1.2	1	0	0	1	1	1	0	Sec63	Brl	domain
EndIII_4Fe-2S	PF10576.4	gi|568163890|ref|YP_008947318.1|	-	0.18	12.0	2.1	0.31	11.3	1.5	1.4	1	0	0	1	1	1	0	Iron-sulfur	binding	domain	of	endonuclease	III
ATP-grasp_2	PF08442.5	gi|568163891|ref|YP_008947319.1|	-	1.4e-28	99.6	3.2	1e-27	96.8	0.5	2.9	2	2	0	2	2	2	1	ATP-grasp	domain
Ligase_CoA	PF00549.14	gi|568163891|ref|YP_008947319.1|	-	1e-15	57.6	0.3	2e-15	56.6	0.2	1.4	1	0	0	1	1	1	1	CoA-ligase
ATP-grasp_5	PF13549.1	gi|568163891|ref|YP_008947319.1|	-	2.4e-06	26.9	0.0	0.097	11.8	0.1	3.8	2	1	1	3	3	3	2	ATP-grasp	domain
CoA_binding	PF02629.14	gi|568163892|ref|YP_008947320.1|	-	1.3e-22	80.1	2.0	1.3e-22	80.1	1.4	2.5	2	1	0	2	2	2	1	CoA	binding	domain
Ligase_CoA	PF00549.14	gi|568163892|ref|YP_008947320.1|	-	1.1e-12	47.8	1.2	1.8e-12	47.1	0.8	1.3	1	0	0	1	1	1	1	CoA-ligase
CoA_binding_2	PF13380.1	gi|568163892|ref|YP_008947320.1|	-	6.4e-08	32.7	0.1	1.3e-07	31.7	0.0	1.6	1	0	0	1	1	1	1	CoA	binding	domain
Succ_CoA_lig	PF13607.1	gi|568163892|ref|YP_008947320.1|	-	2.9e-07	30.1	0.0	4.8e-07	29.4	0.0	1.4	1	0	0	1	1	1	1	Succinyl-CoA	ligase	like	flavodoxin	domain
GFO_IDH_MocA	PF01408.17	gi|568163892|ref|YP_008947320.1|	-	0.024	15.1	0.1	0.07	13.6	0.0	1.7	2	0	0	2	2	2	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
DUF4369	PF14289.1	gi|568164865|ref|YP_008947321.1|	-	0.61	10.1	4.5	2.3	8.3	0.2	3.1	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4369)
YcxB	PF14317.1	gi|568164865|ref|YP_008947321.1|	-	4.7	6.5	5.8	2	7.7	0.5	2.5	2	0	0	2	2	2	0	YcxB-like	protein
DUF402	PF04167.8	gi|568164865|ref|YP_008947321.1|	-	5.4	6.9	7.1	19	5.1	2.2	3.1	3	2	0	3	3	3	0	Protein	of	unknown	function	(DUF402)
Pro_CA	PF00484.14	gi|568163893|ref|YP_008947322.1|	-	5.6e-12	45.9	0.0	2.9e-11	43.5	0.0	1.9	2	0	0	2	2	2	1	Carbonic	anhydrase
Integrin_beta	PF00362.13	gi|568163893|ref|YP_008947322.1|	-	0.07	12.0	0.0	0.14	11.0	0.0	1.4	1	1	0	1	1	1	0	Integrin,	beta	chain
STT3	PF02516.9	gi|568163895|ref|YP_008947324.1|	-	1.7e-22	80.0	43.7	1.7e-22	80.0	30.3	2.0	2	0	0	2	2	2	1	Oligosaccharyl	transferase	STT3	subunit
Nop10p	PF04135.7	gi|568163896|ref|YP_008947325.1|	-	1.7e-24	85.2	3.2	1.8e-24	85.1	2.2	1.0	1	0	0	1	1	1	1	Nucleolar	RNA-binding	protein,	Nop10p	family
NOB1_Zn_bind	PF08772.6	gi|568163896|ref|YP_008947325.1|	-	0.0051	16.6	0.1	0.0061	16.3	0.0	1.2	1	0	0	1	1	1	1	Nin	one	binding	(NOB1)	Zn-ribbon	like
Elf1	PF05129.8	gi|568163896|ref|YP_008947325.1|	-	0.03	13.9	0.0	0.039	13.6	0.0	1.3	1	1	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
Zn_Tnp_IS91	PF14319.1	gi|568163896|ref|YP_008947325.1|	-	0.077	12.5	0.0	0.095	12.2	0.0	1.1	1	0	0	1	1	1	0	Transposase	zinc-binding	domain
EIF_2_alpha	PF07541.7	gi|568163897|ref|YP_008947326.1|	-	1.7e-27	95.4	0.3	1.7e-27	95.4	0.2	1.9	2	1	0	2	2	2	1	Eukaryotic	translation	initiation	factor	2	alpha	subunit
S1	PF00575.18	gi|568163897|ref|YP_008947326.1|	-	8.2e-13	48.2	4.8	2.5e-12	46.6	0.1	2.6	2	0	0	2	2	2	1	S1	RNA	binding	domain
DUF2372	PF10178.4	gi|568163897|ref|YP_008947326.1|	-	0.0039	17.2	0.9	0.2	11.8	0.0	2.9	2	1	1	3	3	3	1	Uncharacterised	conserved	protein	(DUF2372)
N6_N4_Mtase	PF01555.13	gi|568163897|ref|YP_008947326.1|	-	0.026	14.0	2.0	0.035	13.6	1.4	1.2	1	0	0	1	1	1	0	DNA	methylase
CH	PF00307.26	gi|568163897|ref|YP_008947326.1|	-	0.11	12.5	0.5	0.97	9.5	0.1	2.4	2	1	1	3	3	3	0	Calponin	homology	(CH)	domain
Ribosomal_S27e	PF01667.12	gi|568163898|ref|YP_008947327.1|	-	3.7e-19	68.0	1.5	4.2e-19	67.8	1.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S27
DUF3797	PF12677.2	gi|568163898|ref|YP_008947327.1|	-	0.00046	19.7	2.4	0.35	10.5	0.3	2.1	1	1	1	2	2	2	2	Domain	of	unknown	function	(DUF3797)
DNA_RNApol_7kD	PF03604.8	gi|568163898|ref|YP_008947327.1|	-	0.0014	18.0	1.4	0.0033	16.8	0.9	1.7	1	1	0	1	1	1	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
HypA	PF01155.14	gi|568163898|ref|YP_008947327.1|	-	0.012	15.2	0.1	0.013	15.2	0.1	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
RNA_pol_N	PF01194.12	gi|568163898|ref|YP_008947327.1|	-	0.059	13.4	0.2	0.059	13.4	0.1	1.7	2	0	0	2	2	2	0	RNA	polymerases	N	/	8	kDa	subunit
DUF951	PF06107.6	gi|568163898|ref|YP_008947327.1|	-	0.074	12.5	1.5	1.6	8.2	0.0	2.2	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF951)
zinc_ribbon_2	PF13240.1	gi|568163898|ref|YP_008947327.1|	-	0.077	12.4	3.1	0.88	9.1	1.9	2.3	1	1	1	2	2	2	0	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|568163898|ref|YP_008947327.1|	-	0.095	11.9	2.4	0.57	9.4	0.0	2.2	1	1	1	2	2	2	0	zinc-ribbon	domain
eIF-5_eIF-2B	PF01873.12	gi|568163898|ref|YP_008947327.1|	-	0.1	12.2	0.5	0.12	12.0	0.4	1.2	1	0	0	1	1	1	0	Domain	found	in	IF2B/IF5
TF_Zn_Ribbon	PF08271.7	gi|568163898|ref|YP_008947327.1|	-	0.11	11.8	0.3	0.18	11.1	0.2	1.4	1	0	0	1	1	1	0	TFIIB	zinc-binding
TFIIS_C	PF01096.13	gi|568163898|ref|YP_008947327.1|	-	0.28	10.8	3.2	15	5.3	2.2	2.2	1	1	1	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zf-trcl	PF13451.1	gi|568163898|ref|YP_008947327.1|	-	0.57	9.8	3.8	5.8	6.6	0.3	2.1	1	1	1	2	2	2	0	Probable	zinc-binding	domain
zinc_ribbon_5	PF13719.1	gi|568163898|ref|YP_008947327.1|	-	0.86	9.2	6.4	8.4	6.0	1.2	2.5	2	2	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|568163898|ref|YP_008947327.1|	-	1.2	8.9	6.5	12	5.7	0.1	2.5	2	2	0	2	2	2	0	zinc-ribbon	domain
zf-CCHC_6	PF15288.1	gi|568163898|ref|YP_008947327.1|	-	8	6.2	6.7	35	4.1	0.1	2.4	2	0	0	2	2	2	0	Zinc	knuckle
Ribosomal_L44	PF00935.14	gi|568163899|ref|YP_008947328.1|	-	1.1e-28	99.0	8.9	1.1e-28	99.0	6.1	1.6	1	1	1	2	2	2	1	Ribosomal	protein	L44
Ribosomal_L33	PF00471.15	gi|568163899|ref|YP_008947328.1|	-	0.068	13.4	1.7	0.068	13.4	1.2	2.8	2	1	0	2	2	2	0	Ribosomal	protein	L33
zf-FPG_IleRS	PF06827.9	gi|568163899|ref|YP_008947328.1|	-	0.094	12.3	0.8	6.2	6.5	0.1	2.4	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
zf-ribbon_3	PF13248.1	gi|568163899|ref|YP_008947328.1|	-	0.097	11.9	0.4	4.6	6.5	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF2082	PF09855.4	gi|568163899|ref|YP_008947328.1|	-	0.11	12.3	1.8	2.7	7.9	0.1	2.2	2	0	0	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
zf-UBR	PF02207.15	gi|568163899|ref|YP_008947328.1|	-	0.12	12.1	1.9	4.8	6.9	0.1	2.1	2	0	0	2	2	2	0	Putative	zinc	finger	in	N-recognin	(UBR	box)
Adeno_E4_34	PF04528.8	gi|568163899|ref|YP_008947328.1|	-	0.14	11.7	0.8	0.59	9.7	0.0	1.9	1	1	1	2	2	2	0	Adenovirus	early	E4	34	kDa	protein	conserved	region
PyrI_C	PF02748.10	gi|568163899|ref|YP_008947328.1|	-	0.14	11.5	1.2	0.42	10.0	0.1	2.0	2	0	0	2	2	2	0	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
zf-PARP	PF00645.13	gi|568163899|ref|YP_008947328.1|	-	0.19	11.9	2.1	0.2	11.8	0.2	1.9	2	0	0	2	2	2	0	Poly(ADP-ribose)	polymerase	and	DNA-Ligase	Zn-finger	region
HECT_2	PF09814.4	gi|568163899|ref|YP_008947328.1|	-	0.2	10.3	1.8	0.23	10.1	1.2	1.3	1	1	0	1	1	1	0	HECT-like	Ubiquitin-conjugating	enzyme	(E2)-binding
Cys_rich_KTR	PF14205.1	gi|568163899|ref|YP_008947328.1|	-	0.27	10.7	3.5	1	8.8	0.2	2.2	2	0	0	2	2	2	0	Cysteine-rich	KTR
zinc_ribbon_5	PF13719.1	gi|568163899|ref|YP_008947328.1|	-	0.35	10.4	5.1	4.1	7.0	0.2	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|568163899|ref|YP_008947328.1|	-	0.37	10.5	5.3	3.3	7.4	0.2	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
DZR	PF12773.2	gi|568163899|ref|YP_008947328.1|	-	0.45	10.3	4.2	1.4	8.7	2.9	1.7	1	1	0	1	1	1	0	Double	zinc	ribbon
zinc_ribbon_2	PF13240.1	gi|568163899|ref|YP_008947328.1|	-	0.68	9.4	4.2	1.5	8.3	0.5	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
TFIIS_C	PF01096.13	gi|568163899|ref|YP_008947328.1|	-	1	9.0	4.1	13	5.5	0.3	2.4	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
3-HAO	PF06052.7	gi|568163900|ref|YP_008947329.1|	-	0.11	11.8	0.0	0.21	11.0	0.0	1.4	1	0	0	1	1	1	0	3-hydroxyanthranilic	acid	dioxygenase
DNA_primase_S	PF01896.14	gi|568163901|ref|YP_008947330.1|	-	7.9e-16	58.1	0.0	1.5e-15	57.2	0.0	1.5	1	0	0	1	1	1	1	Eukaryotic	and	archaeal	DNA	primase	small	subunit
DUF2365	PF10157.4	gi|568163901|ref|YP_008947330.1|	-	0.061	13.2	0.0	0.1	12.5	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2365)
PCNA_N	PF00705.13	gi|568163902|ref|YP_008947331.1|	-	1.7e-10	40.5	0.1	5.2e-10	38.9	0.0	1.7	2	0	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	N-terminal	domain
PCNA_C	PF02747.10	gi|568163902|ref|YP_008947331.1|	-	0.0005	19.9	0.0	0.0072	16.2	0.0	2.7	1	1	1	2	2	2	1	Proliferating	cell	nuclear	antigen,	C-terminal	domain
Rad9	PF04139.8	gi|568163902|ref|YP_008947331.1|	-	0.0073	15.4	0.0	0.0088	15.1	0.0	1.1	1	0	0	1	1	1	1	Rad9
ATP_bind_1	PF03029.12	gi|568163903|ref|YP_008947332.1|	-	3.9e-58	196.8	0.1	4.3e-58	196.6	0.0	1.0	1	0	0	1	1	1	1	Conserved	hypothetical	ATP	binding	protein
AAA_17	PF13207.1	gi|568163903|ref|YP_008947332.1|	-	2.2e-06	28.5	0.1	7e-06	26.8	0.0	1.9	2	1	0	2	2	1	1	AAA	domain
CbiA	PF01656.18	gi|568163903|ref|YP_008947332.1|	-	4.1e-05	23.0	0.2	8.2e-05	22.0	0.1	1.6	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
PduV-EutP	PF10662.4	gi|568163903|ref|YP_008947332.1|	-	7.9e-05	22.1	0.0	0.0099	15.3	0.0	2.8	2	1	0	2	2	2	1	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_18	PF13238.1	gi|568163903|ref|YP_008947332.1|	-	0.00029	21.1	0.1	0.00066	19.9	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
DUF87	PF01935.12	gi|568163903|ref|YP_008947332.1|	-	0.0004	20.2	0.1	0.00057	19.7	0.1	1.7	1	1	0	1	1	1	1	Domain	of	unknown	function	DUF87
AAA_16	PF13191.1	gi|568163903|ref|YP_008947332.1|	-	0.00041	20.3	0.0	0.0022	18.0	0.0	2.1	2	0	0	2	2	2	1	AAA	ATPase	domain
cobW	PF02492.14	gi|568163903|ref|YP_008947332.1|	-	0.00059	19.3	0.1	0.04	13.3	0.0	2.4	2	1	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
SRP54	PF00448.17	gi|568163903|ref|YP_008947332.1|	-	0.00095	18.6	0.0	0.017	14.5	0.0	2.1	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
MMR_HSR1	PF01926.18	gi|568163903|ref|YP_008947332.1|	-	0.0021	18.0	0.0	0.0054	16.6	0.0	1.7	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
NACHT	PF05729.7	gi|568163903|ref|YP_008947332.1|	-	0.0023	17.6	0.0	0.0046	16.6	0.0	1.5	1	0	0	1	1	1	1	NACHT	domain
Dynamin_N	PF00350.18	gi|568163903|ref|YP_008947332.1|	-	0.0025	17.6	0.1	0.79	9.5	0.0	2.3	2	0	0	2	2	2	1	Dynamin	family
AAA_24	PF13479.1	gi|568163903|ref|YP_008947332.1|	-	0.0029	17.2	0.0	0.0044	16.6	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
MobB	PF03205.9	gi|568163903|ref|YP_008947332.1|	-	0.0031	17.2	0.0	0.007	16.0	0.0	1.6	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_22	PF13401.1	gi|568163903|ref|YP_008947332.1|	-	0.0032	17.5	0.0	0.02	15.0	0.0	2.2	2	1	0	2	2	2	1	AAA	domain
NTPase_1	PF03266.10	gi|568163903|ref|YP_008947332.1|	-	0.0037	17.0	0.2	0.35	10.5	0.0	2.5	3	0	0	3	3	2	1	NTPase
AAA_28	PF13521.1	gi|568163903|ref|YP_008947332.1|	-	0.0042	17.0	0.0	0.0059	16.5	0.0	1.4	1	1	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|568163903|ref|YP_008947332.1|	-	0.0052	16.2	0.0	0.0073	15.7	0.0	1.3	1	0	0	1	1	1	1	AAA-like	domain
Septin	PF00735.13	gi|568163903|ref|YP_008947332.1|	-	0.0058	15.6	0.1	0.27	10.2	0.0	2.4	2	1	0	2	2	2	1	Septin
T2SE	PF00437.15	gi|568163903|ref|YP_008947332.1|	-	0.0075	15.2	0.0	0.011	14.6	0.0	1.2	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_29	PF13555.1	gi|568163903|ref|YP_008947332.1|	-	0.0076	15.7	0.0	0.015	14.7	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
GTP_EFTU	PF00009.22	gi|568163903|ref|YP_008947332.1|	-	0.01	15.2	0.1	1.7	8.0	0.0	2.9	2	1	0	2	2	2	0	Elongation	factor	Tu	GTP	binding	domain
KTI12	PF08433.5	gi|568163903|ref|YP_008947332.1|	-	0.014	14.6	0.0	0.043	13.0	0.0	1.8	3	0	0	3	3	2	0	Chromatin	associated	protein	KTI12
FeoB_N	PF02421.13	gi|568163903|ref|YP_008947332.1|	-	0.016	14.4	0.1	0.53	9.5	0.0	2.4	2	0	0	2	2	2	0	Ferrous	iron	transport	protein	B
Miro	PF08477.8	gi|568163903|ref|YP_008947332.1|	-	0.017	15.5	0.0	0.25	11.8	0.0	2.4	2	0	0	2	2	2	0	Miro-like	protein
ArgK	PF03308.11	gi|568163903|ref|YP_008947332.1|	-	0.019	13.7	0.0	0.031	13.0	0.0	1.3	1	0	0	1	1	1	0	ArgK	protein
AAA_30	PF13604.1	gi|568163903|ref|YP_008947332.1|	-	0.02	14.4	0.0	0.039	13.5	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
ArsA_ATPase	PF02374.10	gi|568163903|ref|YP_008947332.1|	-	0.02	13.9	0.0	0.029	13.4	0.0	1.4	1	0	0	1	1	1	0	Anion-transporting	ATPase
DUF258	PF03193.11	gi|568163903|ref|YP_008947332.1|	-	0.021	14.0	0.0	0.12	11.6	0.0	2.0	1	1	0	1	1	1	0	Protein	of	unknown	function,	DUF258
Viral_helicase1	PF01443.13	gi|568163903|ref|YP_008947332.1|	-	0.025	14.0	0.0	0.056	12.9	0.0	1.6	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
AAA_19	PF13245.1	gi|568163903|ref|YP_008947332.1|	-	0.032	13.9	0.0	0.05	13.3	0.0	1.4	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_14	PF13173.1	gi|568163903|ref|YP_008947332.1|	-	0.035	14.0	0.3	0.13	12.1	0.0	2.2	1	1	1	2	2	2	0	AAA	domain
G-alpha	PF00503.15	gi|568163903|ref|YP_008947332.1|	-	0.047	12.3	0.0	0.1	11.2	0.0	1.5	1	0	0	1	1	1	0	G-protein	alpha	subunit
ABC_tran	PF00005.22	gi|568163903|ref|YP_008947332.1|	-	0.052	13.8	0.2	0.11	12.8	0.1	1.5	1	1	0	1	1	1	0	ABC	transporter
KAP_NTPase	PF07693.9	gi|568163903|ref|YP_008947332.1|	-	0.054	12.4	0.0	0.091	11.7	0.0	1.4	1	1	0	1	1	1	0	KAP	family	P-loop	domain
PhoH	PF02562.11	gi|568163903|ref|YP_008947332.1|	-	0.059	12.5	0.0	0.091	11.9	0.0	1.4	1	0	0	1	1	1	0	PhoH-like	protein
RNA_helicase	PF00910.17	gi|568163903|ref|YP_008947332.1|	-	0.077	13.1	0.0	0.27	11.4	0.0	2.0	3	0	0	3	3	1	0	RNA	helicase
NB-ARC	PF00931.17	gi|568163903|ref|YP_008947332.1|	-	0.08	11.7	0.0	0.16	10.8	0.0	1.5	1	0	0	1	1	1	0	NB-ARC	domain
APS_kinase	PF01583.15	gi|568163903|ref|YP_008947332.1|	-	0.1	12.2	0.0	0.2	11.3	0.0	1.5	1	0	0	1	1	1	0	Adenylylsulphate	kinase
AAA_33	PF13671.1	gi|568163903|ref|YP_008947332.1|	-	0.12	12.2	0.0	0.19	11.6	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
CPT	PF07931.7	gi|568163903|ref|YP_008947332.1|	-	0.13	11.8	0.0	0.21	11.1	0.0	1.4	1	0	0	1	1	1	0	Chloramphenicol	phosphotransferase-like	protein
Zeta_toxin	PF06414.7	gi|568163903|ref|YP_008947332.1|	-	0.16	11.0	0.0	0.24	10.4	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
UPF0079	PF02367.12	gi|568163903|ref|YP_008947332.1|	-	0.16	11.5	0.2	0.39	10.3	0.1	1.7	2	1	0	2	2	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
Pribosyltran_N	PF13793.1	gi|568163904|ref|YP_008947333.1|	-	7.3e-28	96.6	0.0	6.1e-27	93.6	0.0	2.1	2	0	0	2	2	2	1	N-terminal	domain	of	ribose	phosphate	pyrophosphokinase
Pribosyltran	PF00156.22	gi|568163904|ref|YP_008947333.1|	-	1.3e-14	53.9	1.3	2.3e-14	53.2	0.1	1.9	2	0	0	2	2	2	1	Phosphoribosyl	transferase	domain
Pribosyl_synth	PF14572.1	gi|568163904|ref|YP_008947333.1|	-	9.1e-13	48.3	3.2	1e-12	48.2	1.3	1.7	2	0	0	2	2	2	1	Phosphoribosyl	synthetase-associated	domain
UPRTase	PF14681.1	gi|568163904|ref|YP_008947333.1|	-	0.00013	21.1	0.1	0.00028	20.1	0.1	1.6	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
PRTase_2	PF15609.1	gi|568163904|ref|YP_008947333.1|	-	0.0042	16.4	0.1	0.0079	15.5	0.1	1.5	1	0	0	1	1	1	1	Phosphoribosyl	transferase
PRTase_3	PF15610.1	gi|568163904|ref|YP_008947333.1|	-	0.053	12.4	0.1	0.091	11.6	0.0	1.4	1	0	0	1	1	1	0	PRTase	ComF-like
UPF0020	PF01170.13	gi|568163905|ref|YP_008947334.1|	-	5.1e-29	101.1	0.0	1.1e-28	99.9	0.0	1.5	2	0	0	2	2	2	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_26	PF13659.1	gi|568163905|ref|YP_008947334.1|	-	9.4e-12	45.0	0.0	1.6e-11	44.2	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
N6_N4_Mtase	PF01555.13	gi|568163905|ref|YP_008947334.1|	-	3.4e-11	43.0	0.1	1.4e-09	37.8	0.0	2.1	2	0	0	2	2	2	1	DNA	methylase
Methyltransf_31	PF13847.1	gi|568163905|ref|YP_008947334.1|	-	4.1e-07	29.7	0.0	1.3e-06	28.1	0.0	1.8	2	0	0	2	2	2	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|568163905|ref|YP_008947334.1|	-	0.00018	20.9	0.0	0.00044	19.6	0.0	1.5	1	1	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltransf_15	PF09445.5	gi|568163905|ref|YP_008947334.1|	-	0.00035	20.1	0.1	0.0008	18.9	0.0	1.8	2	1	0	2	2	2	1	RNA	cap	guanine-N2	methyltransferase
MethyltransfD12	PF02086.10	gi|568163905|ref|YP_008947334.1|	-	0.0048	16.3	0.5	0.044	13.2	0.0	2.4	2	1	1	3	3	3	1	D12	class	N6	adenine-specific	DNA	methyltransferase
Methyltransf_18	PF12847.2	gi|568163905|ref|YP_008947334.1|	-	0.0069	16.9	0.0	0.014	15.9	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|568163905|ref|YP_008947334.1|	-	0.027	13.5	0.0	0.043	12.9	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
Eco57I	PF07669.6	gi|568163905|ref|YP_008947334.1|	-	0.029	14.6	0.0	0.15	12.4	0.0	2.1	2	0	0	2	2	2	0	Eco57I	restriction-modification	methylase
Methyltransf_25	PF13649.1	gi|568163905|ref|YP_008947334.1|	-	0.033	14.5	0.0	0.067	13.5	0.0	1.6	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|568163905|ref|YP_008947334.1|	-	0.073	13.5	0.0	0.19	12.2	0.0	1.7	1	0	0	1	1	1	0	Methyltransferase	domain
N6_Mtase	PF02384.11	gi|568163905|ref|YP_008947334.1|	-	0.08	12.0	0.0	0.16	10.9	0.0	1.5	1	0	0	1	1	1	0	N-6	DNA	Methylase
Lactamase_B_2	PF12706.2	gi|568163906|ref|YP_008947335.1|	-	6.2e-27	94.4	0.1	8.5e-27	93.9	0.1	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|568163906|ref|YP_008947335.1|	-	2.1e-09	37.2	0.0	5e-07	29.5	0.0	2.3	2	0	0	2	2	2	2	Metallo-beta-lactamase	superfamily
Lactamase_B_4	PF13691.1	gi|568163906|ref|YP_008947335.1|	-	0.082	12.3	0.0	0.16	11.4	0.0	1.5	1	0	0	1	1	1	0	tRNase	Z	endonuclease
Lactamase_B_3	PF13483.1	gi|568163906|ref|YP_008947335.1|	-	0.12	12.0	0.0	0.5	10.0	0.0	1.8	1	1	0	1	1	1	0	Beta-lactamase	superfamily	domain
RNA_binding	PF01877.12	gi|568163907|ref|YP_008947336.1|	-	1.5e-27	95.9	0.9	1.8e-27	95.7	0.6	1.0	1	0	0	1	1	1	1	RNA	binding
AAA_18	PF13238.1	gi|568163908|ref|YP_008947337.1|	-	5.1e-11	42.9	0.6	8.7e-11	42.2	0.3	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|568163908|ref|YP_008947337.1|	-	1.2e-05	26.1	0.3	1.5e-05	25.7	0.2	1.3	1	1	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|568163908|ref|YP_008947337.1|	-	0.00057	19.7	0.0	0.00082	19.2	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
ADK	PF00406.17	gi|568163908|ref|YP_008947337.1|	-	0.00065	19.6	0.1	0.00073	19.4	0.1	1.2	1	0	0	1	1	1	1	Adenylate	kinase
CoaE	PF01121.15	gi|568163908|ref|YP_008947337.1|	-	0.0062	15.9	0.1	0.26	10.6	0.0	2.1	1	1	1	2	2	2	1	Dephospho-CoA	kinase
LigT_PEase	PF02834.11	gi|568163909|ref|YP_008947338.1|	-	2.2e-28	98.0	0.0	6.9e-14	51.5	0.0	2.1	2	0	0	2	2	2	2	LigT	like	Phosphoesterase
2_5_RNA_ligase2	PF13563.1	gi|568163909|ref|YP_008947338.1|	-	2.7e-16	59.6	0.0	3.6e-16	59.2	0.0	1.1	1	0	0	1	1	1	1	2'-5'	RNA	ligase	superfamily
AKAP7_NLS	PF10469.4	gi|568163909|ref|YP_008947338.1|	-	1.1e-11	44.8	0.0	1.5e-11	44.4	0.0	1.2	1	0	0	1	1	1	1	AKAP7	2'5'	RNA	ligase-like	domain
CpcD	PF01383.16	gi|568163909|ref|YP_008947338.1|	-	0.098	12.8	0.0	0.24	11.5	0.0	1.7	1	0	0	1	1	1	0	CpcD/allophycocyanin	linker	domain
tRNA_NucTransf2	PF09249.6	gi|568163910|ref|YP_008947339.1|	-	1.2e-43	147.5	0.0	2.8e-43	146.3	0.0	1.7	1	0	0	1	1	1	1	tRNA	nucleotidyltransferase,	second	domain
NTP_transf_2	PF01909.18	gi|568163910|ref|YP_008947339.1|	-	2.2e-11	43.9	0.3	6.3e-11	42.4	0.2	1.8	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
DNA_pol_B_palm	PF14792.1	gi|568163910|ref|YP_008947339.1|	-	0.0013	18.7	0.0	0.0033	17.4	0.0	1.6	1	0	0	1	1	1	1	DNA	polymerase	beta	palm
TrkH	PF02386.11	gi|568163910|ref|YP_008947339.1|	-	0.014	14.0	0.0	0.021	13.4	0.0	1.2	1	0	0	1	1	1	0	Cation	transport	protein
RIO1	PF01163.17	gi|568163911|ref|YP_008947340.1|	-	0.00024	20.5	0.1	0.00035	19.9	0.0	1.2	1	0	0	1	1	1	1	RIO1	family
Choline_kinase	PF01633.15	gi|568163911|ref|YP_008947340.1|	-	0.055	13.0	2.1	0.64	9.5	0.1	2.0	1	1	1	2	2	2	0	Choline/ethanolamine	kinase
zinc_ribbon_2	PF13240.1	gi|568163912|ref|YP_008947341.1|	-	0.00093	18.6	2.2	0.096	12.2	0.1	2.2	2	0	0	2	2	2	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|568163912|ref|YP_008947341.1|	-	0.0015	17.6	4.7	0.26	10.5	0.7	2.2	2	0	0	2	2	2	2	zinc-ribbon	domain
GFA	PF04828.9	gi|568163912|ref|YP_008947341.1|	-	0.0049	16.7	0.3	0.38	10.7	0.0	2.1	1	1	1	2	2	2	1	Glutathione-dependent	formaldehyde-activating	enzyme
DZR	PF12773.2	gi|568163912|ref|YP_008947341.1|	-	0.0073	16.1	0.1	2.7	7.8	0.0	2.1	2	0	0	2	2	2	1	Double	zinc	ribbon
Zn-ribbon_8	PF09723.5	gi|568163912|ref|YP_008947341.1|	-	0.016	15.1	1.4	4.4	7.3	0.1	2.3	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-ISL3	PF14690.1	gi|568163912|ref|YP_008947341.1|	-	0.023	14.7	0.7	3.9	7.5	0.0	2.2	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-Mss51	PF13824.1	gi|568163912|ref|YP_008947341.1|	-	0.036	13.9	0.8	2.8	7.8	0.0	2.1	2	0	0	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
HypA	PF01155.14	gi|568163912|ref|YP_008947341.1|	-	0.045	13.4	0.0	0.048	13.3	0.0	1.2	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zf-FPG_IleRS	PF06827.9	gi|568163912|ref|YP_008947341.1|	-	0.056	13.1	3.6	0.067	12.8	0.1	2.3	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
DUF35_N	PF12172.3	gi|568163912|ref|YP_008947341.1|	-	0.056	13.3	0.4	6.7	6.7	0.0	2.1	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Nudix_N_2	PF14803.1	gi|568163912|ref|YP_008947341.1|	-	0.057	13.1	3.7	4.1	7.1	0.1	2.2	2	0	0	2	2	2	0	Nudix	N-terminal
OrfB_Zn_ribbon	PF07282.6	gi|568163912|ref|YP_008947341.1|	-	0.11	12.1	0.2	10	5.8	0.0	2.1	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
ADK_lid	PF05191.9	gi|568163912|ref|YP_008947341.1|	-	0.14	11.8	1.3	13	5.4	0.1	2.2	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
zf-C2H2	PF00096.21	gi|568163912|ref|YP_008947341.1|	-	0.17	12.2	3.3	8.7	6.9	0.1	2.2	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
UPF0547	PF10571.4	gi|568163912|ref|YP_008947341.1|	-	0.17	11.5	4.3	2.3	8.0	0.3	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
Auto_anti-p27	PF06677.7	gi|568163912|ref|YP_008947341.1|	-	0.18	11.5	0.8	4.8	7.0	0.2	2.1	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
TFIIS_C	PF01096.13	gi|568163912|ref|YP_008947341.1|	-	0.19	11.3	4.0	2	8.1	0.1	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zf-IS66	PF13005.2	gi|568163912|ref|YP_008947341.1|	-	0.23	11.4	2.9	8.7	6.4	0.1	2.3	2	0	0	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
Zn_ribbon_recom	PF13408.1	gi|568163912|ref|YP_008947341.1|	-	0.25	11.6	3.6	3.4	7.9	2.2	2.1	1	1	1	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
DUF2688	PF10892.3	gi|568163912|ref|YP_008947341.1|	-	0.28	10.8	1.9	0.89	9.2	1.0	2.0	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2688)
TF_Zn_Ribbon	PF08271.7	gi|568163912|ref|YP_008947341.1|	-	0.34	10.2	6.2	2.3	7.6	0.1	2.5	2	1	1	3	3	3	0	TFIIB	zinc-binding
zf-TFIIB	PF13453.1	gi|568163912|ref|YP_008947341.1|	-	0.42	9.8	0.1	0.42	9.8	0.1	1.9	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
DUF2082	PF09855.4	gi|568163912|ref|YP_008947341.1|	-	0.49	10.2	2.1	2.1	8.2	0.2	2.2	2	0	0	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
zf-HIT	PF04438.11	gi|568163912|ref|YP_008947341.1|	-	0.51	10.0	7.2	4.3	7.0	0.5	2.1	2	0	0	2	2	2	0	HIT	zinc	finger
zf-H2C2_2	PF13465.1	gi|568163912|ref|YP_008947341.1|	-	0.52	10.7	2.0	8.9	6.8	0.3	2.2	2	0	0	2	2	2	0	Zinc-finger	double	domain
Rubredoxin	PF00301.15	gi|568163912|ref|YP_008947341.1|	-	0.96	9.3	5.7	1.8	8.4	0.3	2.2	2	0	0	2	2	2	0	Rubredoxin
zf-C4_Topoisom	PF01396.14	gi|568163912|ref|YP_008947341.1|	-	1.1	8.8	4.2	0.63	9.5	0.6	2.0	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
zf-NADH-PPase	PF09297.6	gi|568163912|ref|YP_008947341.1|	-	1.3	8.6	4.9	2.5	7.6	0.3	2.1	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
Zn_Tnp_IS1595	PF12760.2	gi|568163912|ref|YP_008947341.1|	-	1.3	8.8	5.6	9.2	6.1	0.7	2.2	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
Sgf11	PF08209.6	gi|568163912|ref|YP_008947341.1|	-	1.9	7.8	4.3	14	5.1	0.2	2.2	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
DUF1610	PF07754.6	gi|568163912|ref|YP_008947341.1|	-	2.4	8.3	9.9	2.2	8.4	1.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
zf-CCHC	PF00098.18	gi|568163912|ref|YP_008947341.1|	-	7.7	6.6	9.6	5.6	7.0	1.2	2.2	2	0	0	2	2	2	0	Zinc	knuckle
adh_short_C2	PF13561.1	gi|568163913|ref|YP_008947342.1|	-	1.5e-14	54.4	0.1	2e-14	53.9	0.1	1.1	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|568163913|ref|YP_008947342.1|	-	1.7e-14	54.0	0.0	2.3e-14	53.6	0.0	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
Cys_rich_VLP	PF14194.1	gi|568163913|ref|YP_008947342.1|	-	0.082	12.6	0.1	17	5.1	0.0	2.4	2	0	0	2	2	2	0	Cysteine-rich	VLP
DUF1776	PF08643.5	gi|568163913|ref|YP_008947342.1|	-	0.083	12.0	0.0	0.11	11.6	0.0	1.2	1	0	0	1	1	1	0	Fungal	family	of	unknown	function	(DUF1776)
TatD_DNase	PF01026.16	gi|568163914|ref|YP_008947343.1|	-	4.1e-38	131.0	0.0	7.5e-38	130.1	0.0	1.3	1	1	0	1	1	1	1	TatD	related	DNase
Pox_C7_F8A	PF03287.9	gi|568164866|ref|YP_008947344.1|	-	0.55	9.9	4.3	0.75	9.4	1.9	1.8	1	1	1	2	2	2	0	Poxvirus	C7/F8A	protein
ABC_tran	PF00005.22	gi|568163915|ref|YP_008947345.1|	-	1.3e-28	100.0	0.0	1.7e-28	99.5	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|568163915|ref|YP_008947345.1|	-	6.6e-15	55.8	1.2	2.7e-13	50.5	0.9	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|568163915|ref|YP_008947345.1|	-	3.3e-07	29.7	0.6	4e-06	26.1	0.1	2.0	2	0	0	2	2	2	1	AAA	ATPase	domain
SMC_N	PF02463.14	gi|568163915|ref|YP_008947345.1|	-	1.9e-05	24.0	1.1	0.0076	15.4	0.7	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|568163915|ref|YP_008947345.1|	-	0.00053	19.4	0.1	0.0009	18.7	0.1	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|568163915|ref|YP_008947345.1|	-	0.014	15.7	0.1	0.037	14.3	0.0	1.4	1	1	0	1	1	1	0	AAA	domain
AAA_30	PF13604.1	gi|568163915|ref|YP_008947345.1|	-	0.022	14.3	0.1	0.1	12.1	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
AAA_22	PF13401.1	gi|568163915|ref|YP_008947345.1|	-	0.024	14.7	0.7	0.2	11.8	0.5	2.1	1	1	0	1	1	1	0	AAA	domain
MutS_V	PF00488.16	gi|568163915|ref|YP_008947345.1|	-	0.063	12.6	0.3	5.9	6.2	0.0	2.1	2	0	0	2	2	2	0	MutS	domain	V
AAA_10	PF12846.2	gi|568163915|ref|YP_008947345.1|	-	0.074	12.4	0.1	0.15	11.4	0.1	1.5	1	0	0	1	1	1	0	AAA-like	domain
Lysine_decarbox	PF03641.9	gi|568163916|ref|YP_008947347.1|	-	2.7e-07	30.4	0.0	3.6e-07	30.0	0.0	1.3	1	0	0	1	1	1	1	Possible	lysine	decarboxylase
Nuc_deoxyrib_tr	PF05014.10	gi|568163916|ref|YP_008947347.1|	-	0.00082	19.2	0.0	0.0019	18.0	0.0	1.6	2	0	0	2	2	2	1	Nucleoside	2-deoxyribosyltransferase
Rib_5-P_isom_A	PF06026.9	gi|568163917|ref|YP_008947348.1|	-	2.3e-36	124.7	1.2	2.8e-36	124.4	0.8	1.1	1	0	0	1	1	1	1	Ribose	5-phosphate	isomerase	A	(phosphoriboisomerase	A)
Sugar-bind	PF04198.8	gi|568163917|ref|YP_008947348.1|	-	0.00083	18.3	0.0	0.0012	17.7	0.0	1.2	1	0	0	1	1	1	1	Putative	sugar-binding	domain
HMGL-like	PF00682.14	gi|568163918|ref|YP_008947350.1|	-	3e-66	223.4	1.8	4.3e-66	222.9	1.3	1.2	1	0	0	1	1	1	1	HMGL-like
AsnC_trans_reg	PF01037.16	gi|568163918|ref|YP_008947350.1|	-	5.5e-15	54.8	1.6	1.5e-13	50.2	0.4	3.0	3	0	0	3	3	3	1	AsnC	family
ACT_4	PF13291.1	gi|568163918|ref|YP_008947350.1|	-	2.5e-05	24.5	2.2	0.0082	16.4	0.1	4.3	4	0	0	4	4	4	1	ACT	domain
AP_endonuc_2	PF01261.19	gi|568163918|ref|YP_008947350.1|	-	0.00087	18.6	0.2	0.0027	17.0	0.1	1.9	1	1	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
NapD	PF03927.8	gi|568163918|ref|YP_008947350.1|	-	0.0085	15.8	0.4	0.062	13.1	0.3	2.5	1	0	0	1	1	1	1	NapD	protein
Glyco_hydro_97	PF10566.4	gi|568163918|ref|YP_008947350.1|	-	0.011	14.8	0.1	0.017	14.2	0.1	1.2	1	0	0	1	1	1	0	Glycoside	hydrolase	97
PdxJ	PF03740.8	gi|568163918|ref|YP_008947350.1|	-	0.03	13.4	0.4	0.082	12.0	0.2	1.8	1	1	0	1	1	1	0	Pyridoxal	phosphate	biosynthesis	protein	PdxJ
OmpA_membrane	PF01389.12	gi|568163918|ref|YP_008947350.1|	-	0.034	13.6	0.0	0.078	12.4	0.0	1.6	1	0	0	1	1	1	0	OmpA-like	transmembrane	domain
MA3	PF02847.12	gi|568163918|ref|YP_008947350.1|	-	0.091	12.4	0.0	0.35	10.5	0.0	1.9	2	0	0	2	2	2	0	MA3	domain
Spt5-NGN	PF03439.8	gi|568163918|ref|YP_008947350.1|	-	0.12	12.1	0.9	0.72	9.6	0.1	2.4	2	0	0	2	2	2	0	Early	transcription	elongation	factor	of	RNA	pol	II,	NGN	section
ExbD	PF02472.11	gi|568163918|ref|YP_008947350.1|	-	0.13	12.2	0.7	0.48	10.4	0.1	2.1	2	0	0	2	2	2	0	Biopolymer	transport	protein	ExbD/TolR
DUF2513	PF10711.4	gi|568163919|ref|YP_008947351.1|	-	0.011	15.8	0.2	0.014	15.5	0.1	1.3	1	1	0	1	1	1	0	Hypothetical	protein	(DUF2513)
Sipho_Gp157	PF05565.6	gi|568163919|ref|YP_008947351.1|	-	0.04	13.4	0.9	0.048	13.2	0.6	1.1	1	0	0	1	1	1	0	Siphovirus	Gp157
IL31	PF15209.1	gi|568163919|ref|YP_008947351.1|	-	0.056	13.0	0.2	0.061	12.9	0.1	1.2	1	0	0	1	1	1	0	Interleukin	31
AA_kinase	PF00696.23	gi|568163920|ref|YP_008947352.1|	-	4.8e-32	111.4	0.2	5.9e-32	111.1	0.1	1.1	1	0	0	1	1	1	1	Amino	acid	kinase	family
PucR	PF07905.6	gi|568163920|ref|YP_008947352.1|	-	0.041	13.4	0.0	0.23	11.0	0.0	2.0	2	0	0	2	2	2	0	Purine	catabolism	regulatory	protein-like	family
Cren7	PF11520.3	gi|568163921|ref|YP_008947353.1|	-	1.8e-28	97.9	1.9	1.9e-28	97.8	1.3	1.0	1	0	0	1	1	1	1	Chromatin	protein	Cren7
adh_short_C2	PF13561.1	gi|568163922|ref|YP_008947354.1|	-	1.5e-26	93.6	0.0	1.9e-26	93.3	0.0	1.1	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|568163922|ref|YP_008947354.1|	-	4.3e-16	59.2	0.0	5.7e-16	58.8	0.0	1.2	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|568163922|ref|YP_008947354.1|	-	2.7e-05	23.9	0.0	3.9e-05	23.3	0.0	1.2	1	0	0	1	1	1	1	KR	domain
NAD_binding_10	PF13460.1	gi|568163922|ref|YP_008947354.1|	-	0.00029	20.9	0.0	0.00043	20.3	0.0	1.4	1	0	0	1	1	1	1	NADH(P)-binding
Shikimate_DH	PF01488.15	gi|568163922|ref|YP_008947354.1|	-	0.078	13.0	0.0	0.13	12.3	0.0	1.3	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
TcpA	PF05946.7	gi|568163922|ref|YP_008947354.1|	-	0.15	11.9	0.1	1.5	8.7	0.0	2.3	2	0	0	2	2	2	0	Toxin-coregulated	pilus	subunit	TcpA
THUMP	PF02926.12	gi|568163923|ref|YP_008947355.1|	-	1.9e-08	34.2	0.9	2.6e-08	33.8	0.1	1.6	2	0	0	2	2	2	1	THUMP	domain
SRP54	PF00448.17	gi|568163924|ref|YP_008947356.1|	-	9.4e-70	234.0	0.0	1.4e-69	233.4	0.0	1.3	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SRP_SPB	PF02978.14	gi|568163924|ref|YP_008947356.1|	-	3.4e-31	107.5	2.1	1e-30	106.0	0.7	2.3	2	0	0	2	2	2	1	Signal	peptide	binding	domain
SRP54_N	PF02881.14	gi|568163924|ref|YP_008947356.1|	-	6.9e-13	48.5	0.8	6.9e-13	48.5	0.6	2.9	3	1	0	3	3	3	1	SRP54-type	protein,	helical	bundle	domain
CbiA	PF01656.18	gi|568163924|ref|YP_008947356.1|	-	1.6e-05	24.4	0.8	0.00015	21.2	0.5	2.6	2	1	0	2	2	2	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_22	PF13401.1	gi|568163924|ref|YP_008947356.1|	-	4.6e-05	23.5	0.0	0.00023	21.3	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
MobB	PF03205.9	gi|568163924|ref|YP_008947356.1|	-	0.00011	21.9	1.1	0.00025	20.7	0.3	2.0	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_10	PF12846.2	gi|568163924|ref|YP_008947356.1|	-	0.00014	21.4	0.0	0.00021	20.8	0.0	1.4	1	1	0	1	1	1	1	AAA-like	domain
cobW	PF02492.14	gi|568163924|ref|YP_008947356.1|	-	0.00069	19.1	0.1	0.0027	17.1	0.1	2.0	1	1	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_33	PF13671.1	gi|568163924|ref|YP_008947356.1|	-	0.0016	18.2	0.0	0.0044	16.8	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|568163924|ref|YP_008947356.1|	-	0.002	18.9	0.3	0.0076	17.0	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_18	PF13238.1	gi|568163924|ref|YP_008947356.1|	-	0.0029	17.9	0.7	0.014	15.6	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
ArgK	PF03308.11	gi|568163924|ref|YP_008947356.1|	-	0.0045	15.7	0.0	0.013	14.3	0.0	1.7	1	0	0	1	1	1	1	ArgK	protein
Zeta_toxin	PF06414.7	gi|568163924|ref|YP_008947356.1|	-	0.02	14.0	0.1	0.052	12.6	0.1	1.8	1	1	0	1	1	1	0	Zeta	toxin
MMR_HSR1	PF01926.18	gi|568163924|ref|YP_008947356.1|	-	0.037	13.9	1.9	0.17	11.8	0.1	2.7	3	1	0	3	3	3	0	50S	ribosome-binding	GTPase
AAA_30	PF13604.1	gi|568163924|ref|YP_008947356.1|	-	0.037	13.5	0.5	0.14	11.7	0.3	2.0	1	1	0	1	1	1	0	AAA	domain
ATP_bind_1	PF03029.12	gi|568163924|ref|YP_008947356.1|	-	0.045	13.2	0.1	0.16	11.4	0.0	2.0	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
AAA_31	PF13614.1	gi|568163924|ref|YP_008947356.1|	-	0.13	12.1	0.1	0.7	9.8	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
eIF-5a	PF01287.15	gi|568163925|ref|YP_008947357.1|	-	6.9e-16	57.9	0.1	1.3e-15	57.0	0.1	1.5	1	0	0	1	1	1	1	Eukaryotic	elongation	factor	5A	hypusine,	DNA-binding	OB	fold
EFP_N	PF08207.7	gi|568163925|ref|YP_008947357.1|	-	3.4e-07	30.0	0.0	1e-06	28.4	0.0	1.8	2	0	0	2	2	2	1	Elongation	factor	P	(EF-P)	KOW-like	domain
KOW	PF00467.24	gi|568163925|ref|YP_008947357.1|	-	0.00028	20.4	0.4	0.00076	19.1	0.3	1.8	1	0	0	1	1	1	1	KOW	motif
EFP	PF01132.15	gi|568163925|ref|YP_008947357.1|	-	0.012	15.2	0.0	0.026	14.1	0.0	1.5	1	0	0	1	1	1	0	Elongation	factor	P	(EF-P)	OB	domain
MacB_PCD	PF12704.2	gi|568163925|ref|YP_008947357.1|	-	0.05	13.1	0.0	0.14	11.7	0.0	1.7	1	1	0	1	1	1	0	MacB-like	periplasmic	core	domain
TP6A_N	PF04406.9	gi|568163926|ref|YP_008947359.1|	-	6.6e-24	83.3	0.1	1.1e-23	82.6	0.1	1.4	1	0	0	1	1	1	1	Type	IIB	DNA	topoisomerase
DUF2399	PF09664.5	gi|568163926|ref|YP_008947359.1|	-	0.031	14.1	0.0	0.069	13.0	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	C-terminus	(DUF2399)
HAD_2	PF13419.1	gi|568163926|ref|YP_008947359.1|	-	0.053	13.7	0.0	0.1	12.8	0.0	1.4	1	0	0	1	1	1	0	Haloacid	dehalogenase-like	hydrolase
ROK	PF00480.15	gi|568163926|ref|YP_008947359.1|	-	0.19	11.5	0.0	1.4	8.7	0.0	2.1	2	0	0	2	2	2	0	ROK	family
Topo-VIb_trans	PF09239.6	gi|568163927|ref|YP_008947360.1|	-	3.1e-65	218.6	0.4	6.1e-65	217.6	0.3	1.5	1	0	0	1	1	1	1	Topoisomerase	VI	B	subunit,	transducer
HATPase_c_3	PF13589.1	gi|568163927|ref|YP_008947360.1|	-	4.5e-12	45.7	0.0	1.1e-11	44.4	0.0	1.7	2	0	0	2	2	2	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c	PF02518.21	gi|568163927|ref|YP_008947360.1|	-	3.4e-11	42.8	0.0	7.1e-11	41.8	0.0	1.5	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
FbpA	PF05833.6	gi|568163927|ref|YP_008947360.1|	-	1.6e-05	23.6	0.0	1.6e-05	23.6	0.0	2.1	2	0	0	2	2	2	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
Ribosomal_S13	PF00416.17	gi|568163927|ref|YP_008947360.1|	-	0.0046	17.3	0.2	0.02	15.3	0.0	2.1	2	0	0	2	2	2	1	Ribosomal	protein	S13/S18
Spore_III_AB	PF09548.5	gi|568163927|ref|YP_008947360.1|	-	8	6.1	10.4	1.1	9.0	1.4	2.8	3	0	0	3	3	3	0	Stage	III	sporulation	protein	AB	(spore_III_AB)
DS	PF01916.12	gi|568163928|ref|YP_008947361.1|	-	3e-83	279.3	0.1	3.7e-83	279.0	0.0	1.0	1	0	0	1	1	1	1	Deoxyhypusine	synthase
RtcB	PF01139.12	gi|568163929|ref|YP_008947362.1|	-	4.3e-151	503.6	0.6	4.8e-151	503.5	0.4	1.0	1	0	0	1	1	1	1	tRNA-splicing	ligase	RtcB
YHS	PF04945.8	gi|568163930|ref|YP_008947363.1|	-	0.0061	16.3	0.9	0.0084	15.9	0.1	1.7	2	0	0	2	2	2	1	YHS	domain
YjcQ	PF09639.5	gi|568163930|ref|YP_008947363.1|	-	0.014	15.5	0.7	0.1	12.6	0.0	2.0	1	1	1	2	2	2	0	YjcQ	protein
HsbA	PF12296.3	gi|568163930|ref|YP_008947363.1|	-	0.059	13.2	0.3	0.071	12.9	0.2	1.1	1	0	0	1	1	1	0	Hydrophobic	surface	binding	protein	A
YonK	PF09642.5	gi|568163930|ref|YP_008947363.1|	-	0.061	13.0	0.4	0.53	10.0	0.3	2.0	2	0	0	2	2	2	0	YonK	protein
Rad50_zn_hook	PF04423.9	gi|568163930|ref|YP_008947363.1|	-	0.41	10.1	2.3	14	5.2	0.8	2.2	2	0	0	2	2	2	0	Rad50	zinc	hook	motif
DEAD	PF00270.24	gi|568163931|ref|YP_008947364.1|	-	7.4e-30	103.6	0.0	2.5e-29	101.9	0.0	1.9	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
DEAD_assoc	PF08494.6	gi|568163931|ref|YP_008947364.1|	-	1.8e-23	83.2	0.1	1.8e-22	79.9	0.0	2.5	2	1	0	2	2	2	1	DEAD/H	associated
Helicase_C	PF00271.26	gi|568163931|ref|YP_008947364.1|	-	2.7e-14	52.7	0.0	1.6e-13	50.3	0.0	2.2	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|568163931|ref|YP_008947364.1|	-	5.8e-06	26.2	0.0	2.4e-05	24.2	0.0	2.0	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
HTH_24	PF13412.1	gi|568163931|ref|YP_008947364.1|	-	0.0019	17.5	0.5	0.007	15.7	0.0	2.2	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
SNF2_N	PF00176.18	gi|568163931|ref|YP_008947364.1|	-	0.0055	15.5	0.1	0.01	14.6	0.0	1.3	1	0	0	1	1	1	1	SNF2	family	N-terminal	domain
HTH_5	PF01022.15	gi|568163931|ref|YP_008947364.1|	-	0.0084	15.7	0.0	0.031	13.9	0.0	2.0	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_AsnC-type	PF13404.1	gi|568163931|ref|YP_008947364.1|	-	0.021	14.3	0.0	0.055	13.0	0.0	1.7	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
HTH_20	PF12840.2	gi|568163931|ref|YP_008947364.1|	-	0.051	13.3	0.0	0.14	11.9	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_28	PF13518.1	gi|568163931|ref|YP_008947364.1|	-	0.076	13.0	0.0	0.24	11.4	0.0	1.9	1	0	0	1	1	1	0	Helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|568163931|ref|YP_008947364.1|	-	0.084	12.8	0.1	8	6.4	0.1	2.7	2	0	0	2	2	2	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Alba	PF01918.16	gi|568163932|ref|YP_008947365.1|	-	1.7e-11	43.5	0.3	2.2e-11	43.1	0.2	1.2	1	0	0	1	1	1	1	Alba
Topoisom_bac	PF01131.15	gi|568163933|ref|YP_008947366.1|	-	3.2e-81	273.2	0.2	5.1e-81	272.5	0.1	1.3	1	0	0	1	1	1	1	DNA	topoisomerase
Toprim	PF01751.17	gi|568163933|ref|YP_008947366.1|	-	4.9e-20	71.3	0.0	1.8e-19	69.5	0.0	2.0	1	0	0	1	1	1	1	Toprim	domain
DEAD	PF00270.24	gi|568163933|ref|YP_008947366.1|	-	6e-09	35.6	0.6	3.3e-08	33.1	0.4	2.3	1	1	0	1	1	1	1	DEAD/DEAH	box	helicase
ResIII	PF04851.10	gi|568163933|ref|YP_008947366.1|	-	6.1e-07	29.4	0.0	1.8e-06	27.8	0.0	1.8	1	0	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
Toprim_4	PF13662.1	gi|568163933|ref|YP_008947366.1|	-	0.00011	22.1	0.0	0.00033	20.6	0.0	1.8	1	0	0	1	1	1	1	Toprim	domain
zinc_ribbon_2	PF13240.1	gi|568163933|ref|YP_008947366.1|	-	0.00037	19.8	0.7	0.00037	19.8	0.5	2.3	2	0	0	2	2	2	1	zinc-ribbon	domain
HTH_27	PF13463.1	gi|568163933|ref|YP_008947366.1|	-	0.0052	17.0	0.1	1.6	9.0	0.0	3.9	4	0	0	4	4	4	1	Winged	helix	DNA-binding	domain
zf-ribbon_3	PF13248.1	gi|568163933|ref|YP_008947366.1|	-	0.0089	15.2	4.6	0.011	14.9	0.4	2.3	2	0	0	2	2	2	1	zinc-ribbon	domain
zf-C2HC5	PF06221.8	gi|568163933|ref|YP_008947366.1|	-	0.012	15.3	1.3	0.028	14.1	0.9	1.5	1	0	0	1	1	1	0	Putative	zinc	finger	motif,	C2HC5-type
DZR	PF12773.2	gi|568163933|ref|YP_008947366.1|	-	0.018	14.8	0.5	0.018	14.8	0.4	2.2	2	0	0	2	2	2	0	Double	zinc	ribbon
AAA_19	PF13245.1	gi|568163933|ref|YP_008947366.1|	-	0.082	12.6	0.0	0.42	10.3	0.0	2.2	2	0	0	2	2	2	0	Part	of	AAA	domain
zf-C3HC4_3	PF13920.1	gi|568163933|ref|YP_008947366.1|	-	0.86	9.3	4.7	0.33	10.6	1.0	1.9	2	0	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
Sgf11	PF08209.6	gi|568163933|ref|YP_008947366.1|	-	7.7	5.9	6.5	9.8	5.5	0.1	3.0	2	1	1	3	3	3	0	Sgf11	(transcriptional	regulation	protein)
Alba	PF01918.16	gi|568163934|ref|YP_008947367.1|	-	1.3e-19	69.4	0.5	1.8e-19	69.1	0.4	1.2	1	0	0	1	1	1	1	Alba
Latrotoxin_C	PF15658.1	gi|568163936|ref|YP_008947369.1|	-	0.04	13.7	0.6	0.051	13.3	0.4	1.2	1	0	0	1	1	1	0	Latrotoxin	C-terminal	domain
ResIII	PF04851.10	gi|568163938|ref|YP_008947371.1|	-	3e-22	79.3	0.2	3e-22	79.3	0.1	2.5	2	2	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.26	gi|568163938|ref|YP_008947371.1|	-	2e-16	59.5	1.1	3.5e-16	58.8	0.1	1.9	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
DEAD	PF00270.24	gi|568163938|ref|YP_008947371.1|	-	3.1e-13	49.5	1.3	1.1e-11	44.4	0.0	3.0	2	1	0	2	2	2	1	DEAD/DEAH	box	helicase
SNF2_N	PF00176.18	gi|568163938|ref|YP_008947371.1|	-	2.9e-09	36.1	0.5	5.2e-08	32.0	0.4	2.2	1	1	0	1	1	1	1	SNF2	family	N-terminal	domain
AAA_22	PF13401.1	gi|568163938|ref|YP_008947371.1|	-	0.00067	19.8	1.4	0.01	15.9	0.3	3.2	2	2	1	3	3	3	1	AAA	domain
Helicase_RecD	PF05127.9	gi|568163938|ref|YP_008947371.1|	-	0.00088	18.9	0.0	0.0019	17.8	0.0	1.6	1	0	0	1	1	1	1	Helicase
DUF2075	PF09848.4	gi|568163938|ref|YP_008947371.1|	-	0.0014	17.6	0.0	0.0039	16.2	0.0	1.7	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
IstB_IS21	PF01695.12	gi|568163938|ref|YP_008947371.1|	-	0.0043	16.4	0.1	0.49	9.7	0.0	2.4	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
AAA_30	PF13604.1	gi|568163938|ref|YP_008947371.1|	-	0.009	15.6	0.0	0.034	13.7	0.0	2.0	2	1	0	2	2	2	1	AAA	domain
AAA_11	PF13086.1	gi|568163938|ref|YP_008947371.1|	-	0.066	12.7	1.2	1.6	8.2	0.0	2.8	2	1	1	3	3	3	0	AAA	domain
CutA1	PF03091.10	gi|568163940|ref|YP_008947373.1|	-	1.5e-36	124.1	1.5	1.7e-36	123.9	1.0	1.0	1	0	0	1	1	1	1	CutA1	divalent	ion	tolerance	protein
HisK_N	PF09385.5	gi|568163940|ref|YP_008947373.1|	-	0.067	12.8	0.5	0.14	11.7	0.1	1.6	1	1	1	2	2	2	0	Histidine	kinase	N	terminal
Glu-tRNAGln	PF02686.10	gi|568163941|ref|YP_008947374.1|	-	1.4e-19	69.6	0.1	1.7e-19	69.4	0.1	1.1	1	0	0	1	1	1	1	Glu-tRNAGln	amidotransferase	C	subunit
AF0941-like	PF14591.1	gi|568163941|ref|YP_008947374.1|	-	0.0074	16.3	1.2	0.0096	15.9	0.8	1.2	1	0	0	1	1	1	1	AF0941-like
PhnI	PF05861.7	gi|568163941|ref|YP_008947374.1|	-	0.051	12.0	0.0	0.06	11.8	0.0	1.0	1	0	0	1	1	1	0	Bacterial	phosphonate	metabolism	protein	(PhnI)
Amidase	PF01425.16	gi|568163942|ref|YP_008947375.1|	-	3.5e-134	447.9	0.0	4e-134	447.8	0.0	1.0	1	0	0	1	1	1	1	Amidase
Wyosine_form	PF08608.7	gi|568163943|ref|YP_008947376.1|	-	1.3e-22	79.5	0.0	3.1e-22	78.4	0.0	1.7	1	0	0	1	1	1	1	Wyosine	base	formation
Radical_SAM	PF04055.16	gi|568163943|ref|YP_008947376.1|	-	3.4e-20	72.8	0.1	8.4e-20	71.5	0.1	1.6	1	1	0	1	1	1	1	Radical	SAM	superfamily
CTP-dep_RFKase	PF01982.11	gi|568163944|ref|YP_008947377.1|	-	8.3e-42	141.6	0.0	1.3e-41	141.0	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF120
HTH_24	PF13412.1	gi|568163944|ref|YP_008947377.1|	-	1.3e-07	30.9	0.3	2.4e-07	30.0	0.2	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_Crp_2	PF13545.1	gi|568163944|ref|YP_008947377.1|	-	2.3e-06	27.3	0.1	5.6e-06	26.0	0.1	1.6	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
MarR	PF01047.17	gi|568163944|ref|YP_008947377.1|	-	5.3e-06	26.0	0.3	9.4e-06	25.2	0.2	1.4	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.2	gi|568163944|ref|YP_008947377.1|	-	7.6e-06	25.5	0.1	1.4e-05	24.6	0.1	1.4	1	0	0	1	1	1	1	MarR	family
HTH_20	PF12840.2	gi|568163944|ref|YP_008947377.1|	-	9.1e-06	25.3	0.2	5.6e-05	22.8	0.0	2.0	1	1	1	2	2	2	1	Helix-turn-helix	domain
HTH_1	PF00126.22	gi|568163944|ref|YP_008947377.1|	-	1.2e-05	24.9	0.1	1.9e-05	24.2	0.1	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
HxlR	PF01638.12	gi|568163944|ref|YP_008947377.1|	-	3.5e-05	23.3	0.3	6e-05	22.5	0.2	1.3	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_27	PF13463.1	gi|568163944|ref|YP_008947377.1|	-	7.1e-05	23.0	0.2	0.00013	22.1	0.1	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_DeoR	PF08220.7	gi|568163944|ref|YP_008947377.1|	-	0.00015	21.1	0.1	0.00031	20.1	0.0	1.5	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
HTH_5	PF01022.15	gi|568163944|ref|YP_008947377.1|	-	0.00019	21.0	0.1	0.00043	19.8	0.0	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
RepL	PF05732.6	gi|568163944|ref|YP_008947377.1|	-	0.00043	19.5	0.4	0.00066	18.9	0.3	1.2	1	0	0	1	1	1	1	Firmicute	plasmid	replication	protein	(RepL)
HTH_36	PF13730.1	gi|568163944|ref|YP_008947377.1|	-	0.00081	19.4	0.1	0.0018	18.3	0.1	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_8	PF02954.14	gi|568163944|ref|YP_008947377.1|	-	0.00087	18.7	0.0	0.0023	17.4	0.0	1.8	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	Fis	family
HTH_45	PF14947.1	gi|568163944|ref|YP_008947377.1|	-	0.0014	18.3	0.8	0.0025	17.6	0.6	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_11	PF08279.7	gi|568163944|ref|YP_008947377.1|	-	0.0023	17.5	0.3	0.005	16.4	0.2	1.5	1	0	0	1	1	1	1	HTH	domain
TrmB	PF01978.14	gi|568163944|ref|YP_008947377.1|	-	0.0025	17.4	0.2	0.0065	16.1	0.1	1.7	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
Fe_dep_repress	PF01325.14	gi|568163944|ref|YP_008947377.1|	-	0.0035	17.2	0.0	0.0072	16.2	0.0	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
GntR	PF00392.16	gi|568163944|ref|YP_008947377.1|	-	0.0039	16.6	0.1	0.0098	15.3	0.0	1.7	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
Crp	PF00325.15	gi|568163944|ref|YP_008947377.1|	-	0.0051	16.2	0.0	0.015	14.7	0.0	1.8	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	crp	family
HTH_34	PF13601.1	gi|568163944|ref|YP_008947377.1|	-	0.0053	16.7	0.2	0.077	13.0	0.1	2.2	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
DDRGK	PF09756.4	gi|568163944|ref|YP_008947377.1|	-	0.0061	15.9	0.8	0.0088	15.4	0.5	1.2	1	0	0	1	1	1	1	DDRGK	domain
Antitoxin-MazE	PF04014.13	gi|568163944|ref|YP_008947377.1|	-	0.0076	15.9	1.3	0.041	13.6	0.1	2.8	2	1	1	3	3	3	1	Antidote-toxin	recognition	MazE
DUF505	PF04458.7	gi|568163944|ref|YP_008947377.1|	-	0.0077	14.4	0.2	0.0095	14.1	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF505)
DUF2250	PF10007.4	gi|568163944|ref|YP_008947377.1|	-	0.0096	15.8	0.4	0.032	14.1	0.2	1.8	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Sigma70_r4	PF04545.11	gi|568163944|ref|YP_008947377.1|	-	0.016	14.5	0.1	0.031	13.5	0.0	1.5	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_AsnC-type	PF13404.1	gi|568163944|ref|YP_008947377.1|	-	0.02	14.4	0.0	0.036	13.5	0.0	1.4	1	0	0	1	1	1	0	AsnC-type	helix-turn-helix	domain
HTH_CodY	PF08222.6	gi|568163944|ref|YP_008947377.1|	-	0.022	14.0	0.1	0.044	13.1	0.1	1.5	1	0	0	1	1	1	0	CodY	helix-turn-helix	domain
HTH_3	PF01381.17	gi|568163944|ref|YP_008947377.1|	-	0.03	14.1	0.2	0.064	13.1	0.1	1.5	1	0	0	1	1	1	0	Helix-turn-helix
FUR	PF01475.14	gi|568163944|ref|YP_008947377.1|	-	0.033	14.1	0.1	0.052	13.4	0.1	1.3	1	0	0	1	1	1	0	Ferric	uptake	regulator	family
HTH_10	PF04967.7	gi|568163944|ref|YP_008947377.1|	-	0.042	13.4	0.0	0.078	12.5	0.0	1.4	1	0	0	1	1	1	0	HTH	DNA	binding	domain
HTH_Tnp_ISL3	PF13542.1	gi|568163944|ref|YP_008947377.1|	-	0.056	12.6	0.0	0.1	11.7	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_29	PF13551.1	gi|568163944|ref|YP_008947377.1|	-	0.063	13.4	0.0	0.32	11.1	0.0	1.9	2	0	0	2	2	2	0	Winged	helix-turn	helix
HTH_23	PF13384.1	gi|568163944|ref|YP_008947377.1|	-	0.065	12.9	0.0	0.13	11.9	0.0	1.5	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_38	PF13936.1	gi|568163944|ref|YP_008947377.1|	-	0.087	12.3	1.2	0.14	11.7	0.1	1.9	2	0	0	2	2	1	0	Helix-turn-helix	domain
FaeA	PF04703.7	gi|568163944|ref|YP_008947377.1|	-	0.1	12.7	0.0	0.18	11.9	0.0	1.3	1	0	0	1	1	1	0	FaeA-like	protein
DUF357	PF04010.8	gi|568163945|ref|YP_008947378.1|	-	5.8e-20	70.7	1.3	8.8e-20	70.1	0.4	1.7	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF357)
CTP_transf_2	PF01467.21	gi|568163945|ref|YP_008947378.1|	-	3.4e-10	40.2	0.1	7.6e-10	39.0	0.1	1.7	1	1	0	1	1	1	1	Cytidylyltransferase
Urm1	PF09138.6	gi|568163945|ref|YP_008947378.1|	-	0.05	13.7	0.7	0.11	12.5	0.1	1.9	2	1	0	2	2	2	0	Urm1	(Ubiquitin	related	modifier)
FAD_syn	PF06574.7	gi|568163945|ref|YP_008947378.1|	-	0.067	12.8	0.1	0.42	10.2	0.0	2.3	2	1	0	2	2	2	0	FAD	synthetase
TP_methylase	PF00590.15	gi|568163946|ref|YP_008947379.1|	-	5.7e-22	78.4	0.0	6.7e-22	78.2	0.0	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
Metallophos_2	PF12850.2	gi|568163947|ref|YP_008947380.1|	-	9.4e-07	28.7	0.9	1.5e-06	28.0	0.6	1.5	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|568163947|ref|YP_008947380.1|	-	5.8e-06	25.8	1.7	4.5e-05	22.9	1.2	2.0	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
Ribosomal_L4	PF00573.17	gi|568163947|ref|YP_008947380.1|	-	0.016	14.6	0.7	0.023	14.0	0.5	1.3	1	0	0	1	1	1	0	Ribosomal	protein	L4/L1	family
TBP	PF00352.16	gi|568163948|ref|YP_008947381.1|	-	2.9e-60	199.6	0.2	2.6e-34	116.4	0.0	2.0	2	0	0	2	2	2	2	Transcription	factor	TFIID	(or	TATA-binding	protein,	TBP)
DUF3378	PF11858.3	gi|568163948|ref|YP_008947381.1|	-	9.8e-05	22.3	0.0	0.5	10.4	0.0	2.5	1	1	2	3	3	3	2	Domain	of	unknown	function	(DUF3378)
HMA	PF00403.21	gi|568163948|ref|YP_008947381.1|	-	0.045	13.8	1.2	1.6	8.9	0.1	2.5	2	0	0	2	2	2	0	Heavy-metal-associated	domain
DRTGG	PF07085.7	gi|568163948|ref|YP_008947381.1|	-	0.11	12.1	0.1	2	8.0	0.0	2.2	1	1	1	2	2	2	0	DRTGG	domain
DUF373	PF04123.8	gi|568163950|ref|YP_008947383.1|	-	2.3e-100	335.9	23.5	2.7e-100	335.7	16.3	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF373)
Gar1	PF04410.9	gi|568163951|ref|YP_008947384.1|	-	0.012	15.0	0.0	0.014	14.8	0.0	1.3	1	0	0	1	1	1	0	Gar1/Naf1	RNA	binding	region
PRC	PF05239.11	gi|568163951|ref|YP_008947384.1|	-	0.067	13.0	0.1	0.1	12.5	0.1	1.3	1	0	0	1	1	1	0	PRC-barrel	domain
TFIIB	PF00382.14	gi|568163952|ref|YP_008947385.1|	-	2.1e-24	85.0	0.3	8.5e-15	54.3	0.0	2.4	2	0	0	2	2	2	2	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.7	gi|568163952|ref|YP_008947385.1|	-	1.2e-14	53.3	0.7	1.9e-14	52.6	0.5	1.4	1	0	0	1	1	1	1	TFIIB	zinc-binding
A2L_zn_ribbon	PF08792.5	gi|568163952|ref|YP_008947385.1|	-	0.00039	19.7	1.7	0.00086	18.6	1.2	1.6	1	0	0	1	1	1	1	A2L	zinc	ribbon	domain
Sigma70_r4	PF04545.11	gi|568163952|ref|YP_008947385.1|	-	0.0015	17.7	1.0	0.0031	16.8	0.1	2.0	2	0	0	2	2	2	1	Sigma-70,	region	4
Ribosomal_S27e	PF01667.12	gi|568163952|ref|YP_008947385.1|	-	0.0045	16.5	0.2	0.0084	15.6	0.1	1.4	1	0	0	1	1	1	1	Ribosomal	protein	S27
Sigma70_r4_2	PF08281.7	gi|568163952|ref|YP_008947385.1|	-	0.012	15.0	0.2	0.038	13.4	0.1	1.8	1	0	0	1	1	1	0	Sigma-70,	region	4
MA3	PF02847.12	gi|568163952|ref|YP_008947385.1|	-	0.014	15.0	0.2	0.063	12.9	0.1	2.2	1	1	0	1	1	1	0	MA3	domain
GerE	PF00196.14	gi|568163952|ref|YP_008947385.1|	-	0.029	13.6	3.1	0.04	13.2	0.1	2.4	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
DUF948	PF06103.6	gi|568163952|ref|YP_008947385.1|	-	0.048	13.5	1.2	3.1	7.7	0.1	2.6	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
HTH_11	PF08279.7	gi|568163952|ref|YP_008947385.1|	-	0.053	13.1	0.2	0.16	11.6	0.2	1.8	1	0	0	1	1	1	0	HTH	domain
Terminase_5	PF06056.7	gi|568163952|ref|YP_008947385.1|	-	0.1	12.1	1.5	4	7.0	0.0	2.9	3	0	0	3	3	3	0	Putative	ATPase	subunit	of	terminase	(gpP-like)
RNA_pol_Rpc34	PF05158.7	gi|568163953|ref|YP_008947386.1|	-	6e-13	48.6	5.4	1.6e-08	34.0	1.1	2.0	1	1	1	2	2	2	2	RNA	polymerase	Rpc34	subunit
B-block_TFIIIC	PF04182.7	gi|568163953|ref|YP_008947386.1|	-	7.5e-06	25.7	0.2	1.5e-05	24.7	0.2	1.4	1	0	0	1	1	1	1	B-block	binding	subunit	of	TFIIIC
HTH_24	PF13412.1	gi|568163953|ref|YP_008947386.1|	-	0.00093	18.5	0.2	0.0017	17.7	0.1	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TRM	PF02005.11	gi|568163954|ref|YP_008947387.1|	-	8.1e-87	291.5	0.6	9.1e-87	291.4	0.4	1.0	1	0	0	1	1	1	1	N2,N2-dimethylguanosine	tRNA	methyltransferase
Met_10	PF02475.11	gi|568163954|ref|YP_008947387.1|	-	0.0016	18.1	0.1	0.0022	17.6	0.1	1.3	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_31	PF13847.1	gi|568163954|ref|YP_008947387.1|	-	0.0036	16.8	0.0	0.0067	16.0	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|568163954|ref|YP_008947387.1|	-	0.0047	16.3	0.2	0.013	14.8	0.1	1.7	1	1	0	2	2	2	1	Methyltransferase	small	domain
OrfB_Zn_ribbon	PF07282.6	gi|568163954|ref|YP_008947387.1|	-	0.0076	15.8	0.3	0.017	14.7	0.2	1.7	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Methyltransf_16	PF10294.4	gi|568163954|ref|YP_008947387.1|	-	0.015	14.7	0.0	0.028	13.8	0.0	1.4	1	0	0	1	1	1	0	Putative	methyltransferase
DNA_methylase	PF00145.12	gi|568163954|ref|YP_008947387.1|	-	0.029	13.5	0.4	0.063	12.3	0.0	1.6	2	0	0	2	2	2	0	C-5	cytosine-specific	DNA	methylase
zf-CSL	PF05207.8	gi|568163954|ref|YP_008947387.1|	-	0.11	12.0	0.4	0.27	10.7	0.3	1.7	1	0	0	1	1	1	0	CSL	zinc	finger
zf-ribbon_3	PF13248.1	gi|568163954|ref|YP_008947387.1|	-	0.12	11.6	2.1	0.34	10.1	1.4	1.8	1	1	0	1	1	1	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|568163954|ref|YP_008947387.1|	-	2	8.0	4.7	7.6	6.1	3.2	2.0	1	1	0	1	1	1	0	zinc-ribbon	domain
HTH_3	PF01381.17	gi|568163955|ref|YP_008947388.1|	-	4.5e-10	39.2	0.1	1.1e-09	37.9	0.1	1.7	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.2	gi|568163955|ref|YP_008947388.1|	-	1.7e-08	34.3	0.2	5.7e-08	32.7	0.2	1.9	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_31	PF13560.1	gi|568163955|ref|YP_008947388.1|	-	1e-05	25.5	0.0	1.6e-05	24.9	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_26	PF13443.1	gi|568163955|ref|YP_008947388.1|	-	0.002	18.3	0.0	0.0052	16.9	0.0	1.8	1	0	0	1	1	1	1	Cro/C1-type	HTH	DNA-binding	domain
HTH_11	PF08279.7	gi|568163955|ref|YP_008947388.1|	-	0.0076	15.8	0.0	0.031	13.9	0.0	2.1	1	0	0	1	1	1	1	HTH	domain
HTH_25	PF13413.1	gi|568163955|ref|YP_008947388.1|	-	0.017	14.7	0.1	0.034	13.7	0.1	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
DUF61	PF01886.11	gi|568163956|ref|YP_008947389.1|	-	3.2e-20	72.3	0.3	3.7e-20	72.1	0.2	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF61
Fibrillarin	PF01269.12	gi|568163957|ref|YP_008947390.1|	-	2.6e-97	324.2	0.1	3.1e-97	324.0	0.1	1.0	1	0	0	1	1	1	1	Fibrillarin
GCD14	PF08704.5	gi|568163957|ref|YP_008947390.1|	-	0.024	14.1	0.0	0.088	12.2	0.0	1.8	1	1	0	1	1	1	0	tRNA	methyltransferase	complex	GCD14	subunit
Methyltransf_24	PF13578.1	gi|568163957|ref|YP_008947390.1|	-	0.027	15.3	0.0	0.047	14.5	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
PCMT	PF01135.14	gi|568163957|ref|YP_008947390.1|	-	0.037	13.5	0.0	0.068	12.7	0.0	1.4	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
DUF3986	PF13143.1	gi|568163957|ref|YP_008947390.1|	-	0.057	13.8	0.1	0.14	12.6	0.1	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3986)
Nop	PF01798.13	gi|568163958|ref|YP_008947391.1|	-	2.3e-54	182.7	0.0	6e-54	181.4	0.0	1.7	1	0	0	1	1	1	1	Putative	snoRNA	binding	domain
NOSIC	PF08060.8	gi|568163958|ref|YP_008947391.1|	-	9.3e-24	82.9	1.9	9.8e-24	82.9	0.2	2.0	2	0	0	2	2	2	1	NOSIC	(NUC001)	domain
HHH_5	PF14520.1	gi|568163958|ref|YP_008947391.1|	-	0.054	13.6	1.4	6.3	7.0	0.0	3.2	2	1	0	2	2	2	0	Helix-hairpin-helix	domain
Mt_ATP-synt_B	PF05405.9	gi|568163958|ref|YP_008947391.1|	-	0.079	12.4	1.4	0.13	11.7	0.3	1.8	2	0	0	2	2	2	0	Mitochondrial	ATP	synthase	B	chain	precursor	(ATP-synt_B)
Peptidase_S49_N	PF08496.5	gi|568163958|ref|YP_008947391.1|	-	0.41	10.4	5.3	0.68	9.7	3.7	1.4	1	0	0	1	1	1	0	Peptidase	family	S49	N-terminal
Ribosomal_S30	PF04758.9	gi|568163959|ref|YP_008947392.1|	-	6.2e-14	51.4	4.0	7.9e-14	51.1	2.8	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S30
Sas10	PF09368.5	gi|568163959|ref|YP_008947392.1|	-	0.062	13.4	6.2	0.13	12.4	4.1	1.6	1	1	1	2	2	2	0	Sas10	C-terminal	domain
Asparaginase	PF00710.15	gi|568163960|ref|YP_008947393.1|	-	1.3e-92	310.0	0.0	1.6e-92	309.7	0.0	1.1	1	0	0	1	1	1	1	Asparaginase
GatB_N	PF02934.10	gi|568163961|ref|YP_008947394.1|	-	6.2e-80	268.1	0.1	8.5e-80	267.6	0.1	1.1	1	0	0	1	1	1	1	GatB/GatE	catalytic	domain
GatB_Yqey	PF02637.13	gi|568163961|ref|YP_008947394.1|	-	1.2e-21	76.9	4.6	1.2e-21	76.9	3.2	2.4	2	0	0	2	2	2	1	GatB	domain
GAD	PF02938.9	gi|568163961|ref|YP_008947394.1|	-	3.2e-13	49.6	4.1	1.1e-12	47.9	0.1	3.1	3	0	0	3	3	3	1	GAD	domain
YqeY	PF09424.5	gi|568163961|ref|YP_008947394.1|	-	0.0033	17.2	0.6	0.0076	16.1	0.4	1.7	1	0	0	1	1	1	1	Yqey-like	protein
HTH_3	PF01381.17	gi|568163962|ref|YP_008947396.1|	-	0.013	15.2	0.5	0.022	14.6	0.3	1.3	1	0	0	1	1	1	0	Helix-turn-helix
HTH_23	PF13384.1	gi|568163962|ref|YP_008947396.1|	-	0.017	14.7	0.1	0.028	14.0	0.1	1.4	1	0	0	1	1	1	0	Homeodomain-like	domain
Tn7_Tnp_TnsA_C	PF08721.6	gi|568163962|ref|YP_008947396.1|	-	0.081	12.9	0.1	3.5	7.7	0.0	2.2	2	0	0	2	2	2	0	TnsA	endonuclease	C	terminal
FliT	PF05400.8	gi|568163962|ref|YP_008947396.1|	-	0.096	13.1	0.0	0.14	12.5	0.0	1.2	1	0	0	1	1	1	0	Flagellar	protein	FliT
Cro	PF09048.5	gi|568163962|ref|YP_008947396.1|	-	0.14	11.8	0.1	0.79	9.4	0.0	2.1	1	1	1	2	2	2	0	Cro
Ribonuc_red_lgC	PF02867.10	gi|568163963|ref|YP_008947397.1|	-	4.1e-171	570.2	0.0	5.4e-171	569.8	0.0	1.2	1	0	0	1	1	1	1	Ribonucleotide	reductase,	barrel	domain
Ribonuc_red_lgN	PF00317.16	gi|568163963|ref|YP_008947397.1|	-	3.8e-28	97.1	0.1	8.9e-28	95.9	0.1	1.7	1	0	0	1	1	1	1	Ribonucleotide	reductase,	all-alpha	domain
ATP-cone	PF03477.11	gi|568163963|ref|YP_008947397.1|	-	1e-07	32.3	0.0	3.6e-07	30.5	0.0	2.1	1	0	0	1	1	1	1	ATP	cone	domain
PGK	PF00162.14	gi|568163964|ref|YP_008947399.1|	-	3.3e-111	371.5	0.2	3.7e-111	371.3	0.1	1.0	1	0	0	1	1	1	1	Phosphoglycerate	kinase
Gp_dh_N	PF00044.19	gi|568163965|ref|YP_008947400.1|	-	2.7e-21	76.0	1.7	1.3e-20	73.8	0.7	2.2	2	0	0	2	2	2	1	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
Gp_dh_C	PF02800.15	gi|568163965|ref|YP_008947400.1|	-	1e-14	54.2	0.2	1.5e-14	53.7	0.1	1.3	1	0	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
DapB_N	PF01113.15	gi|568163965|ref|YP_008947400.1|	-	9.1e-13	48.2	0.3	2.2e-12	46.9	0.1	1.7	1	1	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
Semialdhyde_dh	PF01118.19	gi|568163965|ref|YP_008947400.1|	-	9.4e-05	22.7	0.0	0.00024	21.3	0.0	1.7	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
GFO_IDH_MocA	PF01408.17	gi|568163965|ref|YP_008947400.1|	-	0.00043	20.7	0.0	0.0014	19.1	0.0	1.9	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
2-Hacid_dh_C	PF02826.14	gi|568163965|ref|YP_008947400.1|	-	0.00076	18.6	0.1	0.029	13.5	0.1	2.5	1	1	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_3	PF03447.11	gi|568163965|ref|YP_008947400.1|	-	0.0058	17.0	0.0	0.018	15.3	0.0	1.9	1	0	0	1	1	1	1	Homoserine	dehydrogenase,	NAD	binding	domain
IlvN	PF07991.7	gi|568163965|ref|YP_008947400.1|	-	0.016	14.5	0.3	0.26	10.6	0.0	2.5	2	1	1	3	3	3	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
NAD_binding_2	PF03446.10	gi|568163965|ref|YP_008947400.1|	-	0.091	12.5	0.1	0.72	9.6	0.0	2.4	1	1	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Usp	PF00582.21	gi|568163966|ref|YP_008947401.1|	-	2.3e-23	82.9	0.3	4.4e-23	82.0	0.2	1.4	1	1	0	1	1	1	1	Universal	stress	protein	family
ETF	PF01012.16	gi|568163966|ref|YP_008947401.1|	-	0.035	13.8	0.0	0.059	13.0	0.0	1.5	1	1	0	1	1	1	0	Electron	transfer	flavoprotein	domain
SHMT	PF00464.14	gi|568163967|ref|YP_008947402.1|	-	9.4e-65	218.5	0.0	1.3e-64	218.1	0.0	1.1	1	0	0	1	1	1	1	Serine	hydroxymethyltransferase
Beta_elim_lyase	PF01212.16	gi|568163967|ref|YP_008947402.1|	-	8.5e-11	41.5	0.0	1.1e-10	41.1	0.0	1.2	1	0	0	1	1	1	1	Beta-eliminating	lyase
Aminotran_1_2	PF00155.16	gi|568163967|ref|YP_008947402.1|	-	4.2e-09	35.8	0.0	1.6e-08	33.9	0.0	1.9	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.14	gi|568163967|ref|YP_008947402.1|	-	0.00062	18.6	0.1	0.0014	17.4	0.1	1.7	1	1	0	1	1	1	1	Aminotransferase	class-V
SelA	PF03841.8	gi|568163967|ref|YP_008947402.1|	-	0.0009	18.0	0.1	0.0026	16.5	0.0	1.8	2	0	0	2	2	2	1	L-seryl-tRNA	selenium	transferase
Cys_Met_Meta_PP	PF01053.15	gi|568163967|ref|YP_008947402.1|	-	0.015	13.5	0.0	0.022	13.0	0.0	1.3	1	0	0	1	1	1	0	Cys/Met	metabolism	PLP-dependent	enzyme
DegT_DnrJ_EryC1	PF01041.12	gi|568163967|ref|YP_008947402.1|	-	0.04	12.9	0.0	0.13	11.2	0.0	1.7	1	1	0	1	1	1	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
DUF3469	PF11952.3	gi|568163967|ref|YP_008947402.1|	-	0.69	9.6	3.3	2.7	7.7	0.0	2.9	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3469)
DUF919	PF06034.6	gi|568163967|ref|YP_008947402.1|	-	1.6	8.4	6.4	4.2	7.0	0.2	3.2	3	0	0	3	3	3	0	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF919)
HMG-CoA_red	PF00368.13	gi|568163968|ref|YP_008947403.1|	-	3.9e-143	476.6	0.8	4.5e-143	476.4	0.5	1.0	1	0	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	reductase
DUF35	PF01796.12	gi|568163969|ref|YP_008947404.1|	-	1.1e-13	51.1	0.1	1.6e-13	50.6	0.0	1.2	1	0	0	1	1	1	1	DUF35	OB-fold	domain
DUF35_N	PF12172.3	gi|568163969|ref|YP_008947404.1|	-	5.8e-05	22.8	0.0	8.6e-05	22.3	0.0	1.2	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Methyltransf_13	PF08421.6	gi|568163969|ref|YP_008947404.1|	-	0.0053	16.2	0.0	2.4	7.7	0.0	2.3	2	0	0	2	2	2	2	Putative	zinc	binding	domain
RecR	PF02132.10	gi|568163969|ref|YP_008947404.1|	-	0.023	14.1	1.3	0.065	12.6	0.9	1.7	1	1	1	2	2	2	0	RecR	protein
Desulfoferrod_N	PF06397.7	gi|568163969|ref|YP_008947404.1|	-	0.034	13.5	3.8	2.1	7.8	0.1	2.4	2	0	0	2	2	2	0	Desulfoferrodoxin,	N-terminal	domain
DZR	PF12773.2	gi|568163969|ref|YP_008947404.1|	-	0.036	13.8	0.8	0.053	13.3	0.6	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
Prim_Zn_Ribbon	PF08273.7	gi|568163969|ref|YP_008947404.1|	-	0.089	12.8	0.0	0.43	10.7	0.0	2.0	2	0	0	2	2	2	0	Zinc-binding	domain	of	primase-helicase
TOBE	PF03459.12	gi|568163969|ref|YP_008947404.1|	-	0.094	12.8	0.0	0.16	12.1	0.0	1.3	1	0	0	1	1	1	0	TOBE	domain
Zn-ribbon_8	PF09723.5	gi|568163969|ref|YP_008947404.1|	-	0.14	12.1	2.0	1.8	8.5	1.4	2.2	1	1	0	1	1	1	0	Zinc	ribbon	domain
ACP_syn_III	PF08545.5	gi|568163970|ref|YP_008947405.1|	-	0.00015	21.3	0.0	0.0061	16.1	0.0	2.4	2	0	0	2	2	2	2	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
ACP_syn_III_C	PF08541.5	gi|568163971|ref|YP_008947406.1|	-	2.2e-11	43.6	0.0	1.9e-10	40.6	0.0	2.5	4	0	0	4	4	4	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III	C	terminal
HMG_CoA_synt_N	PF01154.12	gi|568163971|ref|YP_008947406.1|	-	1.4e-05	24.7	0.1	2.2e-05	24.0	0.0	1.3	1	0	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	synthase	N	terminal
ACP_syn_III	PF08545.5	gi|568163971|ref|YP_008947406.1|	-	1.9e-05	24.2	0.4	4.2e-05	23.1	0.1	1.7	2	0	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
HMG_CoA_synt_C	PF08540.5	gi|568163971|ref|YP_008947406.1|	-	0.00014	21.4	0.1	0.014	14.8	0.0	2.1	1	1	1	2	2	2	2	Hydroxymethylglutaryl-coenzyme	A	synthase	C	terminal
AdoMet_dc	PF02675.10	gi|568163972|ref|YP_008947407.1|	-	2.9e-31	107.4	0.0	3.4e-31	107.2	0.0	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	decarboxylase
PapC_N	PF13954.1	gi|568164872|ref|YP_008947408.1|	-	0.0033	17.0	0.3	0.0068	15.9	0.2	1.5	1	0	0	1	1	1	1	PapC	N-terminal	domain
CSS-motif	PF12792.2	gi|568164872|ref|YP_008947408.1|	-	0.01	15.2	0.9	0.016	14.5	0.3	1.6	1	1	1	2	2	2	1	CSS	motif	domain	associated	with	EAL
CARDB	PF07705.6	gi|568164872|ref|YP_008947408.1|	-	0.055	13.5	0.3	0.055	13.5	0.2	3.1	2	1	2	4	4	4	0	CARDB
RNA_pol_Rpb1_2	PF00623.15	gi|568164873|ref|YP_008947409.1|	-	0.6	10.0	3.5	0.5	10.3	1.1	2.0	1	1	1	2	2	2	0	RNA	polymerase	Rpb1,	domain	2
HhH-GPD	PF00730.20	gi|568163973|ref|YP_008947410.1|	-	9.9e-07	29.0	0.1	1.5e-06	28.3	0.0	1.3	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
DNA_pol_lambd_f	PF10391.4	gi|568163973|ref|YP_008947410.1|	-	0.043	13.3	0.1	0.15	11.6	0.0	1.9	1	1	1	2	2	2	0	Fingers	domain	of	DNA	polymerase	lambda
2-Hacid_dh_C	PF02826.14	gi|568163974|ref|YP_008947411.1|	-	2.7e-53	179.7	0.3	5.1e-53	178.8	0.1	1.5	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.25	gi|568163974|ref|YP_008947411.1|	-	4.4e-34	116.8	0.8	4.9e-34	116.6	0.5	1.0	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
AdoHcyase_NAD	PF00670.16	gi|568163974|ref|YP_008947411.1|	-	1.5e-07	31.4	0.8	1.5e-07	31.4	0.6	1.8	2	0	0	2	2	2	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
NAD_binding_2	PF03446.10	gi|568163974|ref|YP_008947411.1|	-	1.2e-06	28.4	0.6	3.4e-06	26.9	0.1	1.9	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
3HCDH_N	PF02737.13	gi|568163974|ref|YP_008947411.1|	-	0.0028	17.3	0.1	0.0059	16.2	0.1	1.7	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
IlvN	PF07991.7	gi|568163974|ref|YP_008947411.1|	-	0.003	16.9	0.2	0.0068	15.7	0.1	1.7	2	0	0	2	2	2	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
AlaDh_PNT_C	PF01262.16	gi|568163974|ref|YP_008947411.1|	-	0.0047	16.5	4.5	0.068	12.7	0.6	3.3	3	1	0	3	3	3	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
ELFV_dehydrog	PF00208.16	gi|568163974|ref|YP_008947411.1|	-	0.016	14.7	0.4	0.037	13.6	0.2	1.5	1	0	0	1	1	1	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
PTS_IIB	PF02302.12	gi|568163974|ref|YP_008947411.1|	-	0.075	13.5	7.5	0.29	11.6	0.6	3.4	3	1	0	3	3	3	0	PTS	system,	Lactose/Cellobiose	specific	IIB	subunit
ThiF	PF00899.16	gi|568163974|ref|YP_008947411.1|	-	0.094	12.5	2.0	9.3	6.0	0.0	2.8	2	0	0	2	2	2	0	ThiF	family
UDPG_MGDP_dh_N	PF03721.9	gi|568163974|ref|YP_008947411.1|	-	0.12	11.7	2.7	0.24	10.7	0.3	2.6	2	2	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
F420_oxidored	PF03807.12	gi|568163974|ref|YP_008947411.1|	-	0.21	12.0	2.3	0.44	11.0	0.4	2.5	2	2	1	3	3	3	0	NADP	oxidoreductase	coenzyme	F420-dependent
TrkA_N	PF02254.13	gi|568163974|ref|YP_008947411.1|	-	0.3	11.1	3.4	1.5	8.8	0.0	3.0	3	1	0	3	3	3	0	TrkA-N	domain
Pyr_redox	PF00070.22	gi|568163974|ref|YP_008947411.1|	-	5.5	7.4	6.7	5.4	7.4	0.3	3.5	3	1	1	4	4	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
Aminotran_5	PF00266.14	gi|568163975|ref|YP_008947412.1|	-	2.8e-26	92.1	0.0	3.2e-26	91.9	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class-V
Aminotran_1_2	PF00155.16	gi|568163975|ref|YP_008947412.1|	-	7.4e-08	31.7	0.0	1.1e-07	31.1	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Beta_elim_lyase	PF01212.16	gi|568163975|ref|YP_008947412.1|	-	5.6e-06	25.7	0.0	8.4e-06	25.1	0.0	1.3	1	1	0	1	1	1	1	Beta-eliminating	lyase
Cys_Met_Meta_PP	PF01053.15	gi|568163975|ref|YP_008947412.1|	-	6.7e-06	24.6	0.0	1e-05	24.0	0.0	1.2	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
DUF521	PF04412.8	gi|568163975|ref|YP_008947412.1|	-	0.011	14.3	0.0	0.016	13.7	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF521)
RNA_pol_Rpb6	PF01192.17	gi|568163976|ref|YP_008947413.1|	-	1.1e-17	63.4	0.1	1.5e-17	63.0	0.1	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb6
Pox_RNA_Pol_19	PF05320.7	gi|568163976|ref|YP_008947413.1|	-	0.00081	19.1	0.5	0.00081	19.1	0.3	1.0	1	0	0	1	1	1	1	Poxvirus	DNA-directed	RNA	polymerase	19	kDa	subunit
Topoisom_bac	PF01131.15	gi|568163977|ref|YP_008947414.1|	-	6.9e-98	328.0	0.2	1e-97	327.5	0.2	1.2	1	0	0	1	1	1	1	DNA	topoisomerase
Toprim	PF01751.17	gi|568163977|ref|YP_008947414.1|	-	1.4e-12	47.4	0.0	1.4e-12	47.4	0.0	2.8	3	1	0	3	3	3	1	Toprim	domain
GLE1	PF07817.8	gi|568163977|ref|YP_008947414.1|	-	0.022	13.6	0.0	0.15	10.9	0.1	2.2	2	0	0	2	2	2	0	GLE1-like	protein
AAA	PF00004.24	gi|568163978|ref|YP_008947415.1|	-	1.4e-41	141.8	0.1	1e-40	138.9	0.0	2.1	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
MIT	PF04212.13	gi|568163978|ref|YP_008947415.1|	-	4.4e-15	55.3	5.5	4.4e-15	55.3	3.8	1.9	2	0	0	2	2	1	1	MIT	(microtubule	interacting	and	transport)	domain
AAA_14	PF13173.1	gi|568163978|ref|YP_008947415.1|	-	4.4e-08	33.0	0.1	3.4e-07	30.2	0.0	2.4	1	1	2	3	3	2	1	AAA	domain
RuvB_N	PF05496.7	gi|568163978|ref|YP_008947415.1|	-	5.7e-08	32.0	0.0	8.6e-07	28.2	0.0	2.3	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_22	PF13401.1	gi|568163978|ref|YP_008947415.1|	-	2.4e-07	30.9	0.1	4.9e-06	26.7	0.0	2.9	3	1	0	3	3	2	1	AAA	domain
AAA_2	PF07724.9	gi|568163978|ref|YP_008947415.1|	-	3.4e-07	30.3	0.0	8e-07	29.1	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
AAA_16	PF13191.1	gi|568163978|ref|YP_008947415.1|	-	1.7e-06	28.1	0.0	0.00066	19.7	0.0	2.9	2	1	1	3	3	3	1	AAA	ATPase	domain
Vps4_C	PF09336.5	gi|568163978|ref|YP_008947415.1|	-	2.8e-06	27.1	0.4	1.6e-05	24.6	0.0	2.2	2	0	0	2	2	2	1	Vps4	C	terminal	oligomerisation	domain
AAA_17	PF13207.1	gi|568163978|ref|YP_008947415.1|	-	1.2e-05	26.1	0.2	0.00011	23.0	0.2	2.6	1	1	0	1	1	1	1	AAA	domain
AAA_25	PF13481.1	gi|568163978|ref|YP_008947415.1|	-	2e-05	24.1	0.1	0.015	14.7	0.0	2.5	1	1	1	2	2	2	2	AAA	domain
AAA_5	PF07728.9	gi|568163978|ref|YP_008947415.1|	-	7.2e-05	22.5	0.2	0.0022	17.7	0.0	3.0	2	1	0	2	2	1	1	AAA	domain	(dynein-related	subfamily)
Arch_ATPase	PF01637.13	gi|568163978|ref|YP_008947415.1|	-	7.2e-05	22.5	5.5	0.16	11.6	0.0	3.7	2	2	2	4	4	4	2	Archaeal	ATPase
Zeta_toxin	PF06414.7	gi|568163978|ref|YP_008947415.1|	-	0.00056	19.0	0.0	0.0018	17.4	0.0	1.9	2	0	0	2	2	1	1	Zeta	toxin
TIP49	PF06068.8	gi|568163978|ref|YP_008947415.1|	-	0.00063	18.5	0.0	0.0011	17.7	0.0	1.5	1	0	0	1	1	1	1	TIP49	C-terminus
Viral_helicase1	PF01443.13	gi|568163978|ref|YP_008947415.1|	-	0.00074	19.1	0.0	0.0023	17.4	0.0	1.8	2	0	0	2	2	2	1	Viral	(Superfamily	1)	RNA	helicase
AAA_10	PF12846.2	gi|568163978|ref|YP_008947415.1|	-	0.0013	18.2	0.0	5	6.4	0.0	3.2	3	0	0	3	3	3	0	AAA-like	domain
RNA_helicase	PF00910.17	gi|568163978|ref|YP_008947415.1|	-	0.0018	18.4	0.1	0.011	15.8	0.0	2.6	2	2	0	2	2	1	1	RNA	helicase
AAA_24	PF13479.1	gi|568163978|ref|YP_008947415.1|	-	0.0021	17.6	0.1	0.0052	16.4	0.0	1.8	2	0	0	2	2	1	1	AAA	domain
TPR_11	PF13414.1	gi|568163978|ref|YP_008947415.1|	-	0.0032	17.0	1.1	0.0072	15.9	0.8	1.6	1	0	0	1	1	1	1	TPR	repeat
ResIII	PF04851.10	gi|568163978|ref|YP_008947415.1|	-	0.0036	17.1	0.0	0.053	13.3	0.0	2.4	1	1	1	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
AAA_18	PF13238.1	gi|568163978|ref|YP_008947415.1|	-	0.0055	17.0	0.7	0.025	14.8	0.0	2.6	2	1	1	3	3	1	1	AAA	domain
Mg_chelatase	PF01078.16	gi|568163978|ref|YP_008947415.1|	-	0.0062	15.7	0.0	0.016	14.4	0.0	1.6	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
Sigma54_activat	PF00158.21	gi|568163978|ref|YP_008947415.1|	-	0.0064	15.9	0.0	0.082	12.3	0.0	2.3	1	1	0	1	1	1	1	Sigma-54	interaction	domain
AAA_19	PF13245.1	gi|568163978|ref|YP_008947415.1|	-	0.0088	15.7	0.0	0.021	14.5	0.0	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_33	PF13671.1	gi|568163978|ref|YP_008947415.1|	-	0.0096	15.8	0.0	0.021	14.6	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.12	gi|568163978|ref|YP_008947415.1|	-	0.015	14.7	0.0	0.031	13.6	0.0	1.6	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
ATP-synt_ab	PF00006.20	gi|568163978|ref|YP_008947415.1|	-	0.016	14.6	0.0	0.034	13.6	0.0	1.5	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA-ATPase_like	PF09820.4	gi|568163978|ref|YP_008947415.1|	-	0.018	14.2	0.2	0.078	12.1	0.0	2.1	2	0	0	2	2	2	0	Predicted	AAA-ATPase
DUF2075	PF09848.4	gi|568163978|ref|YP_008947415.1|	-	0.019	13.9	0.0	0.04	12.9	0.0	1.6	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
NACHT	PF05729.7	gi|568163978|ref|YP_008947415.1|	-	0.021	14.4	0.0	0.047	13.3	0.0	1.6	1	0	0	1	1	1	0	NACHT	domain
AAA_3	PF07726.6	gi|568163978|ref|YP_008947415.1|	-	0.024	14.2	0.0	0.28	10.7	0.0	2.3	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Parvo_NS1	PF01057.12	gi|568163978|ref|YP_008947415.1|	-	0.025	13.4	0.0	0.058	12.2	0.0	1.5	1	0	0	1	1	1	0	Parvovirus	non-structural	protein	NS1
SKI	PF01202.17	gi|568163978|ref|YP_008947415.1|	-	0.026	14.3	0.0	0.082	12.7	0.0	1.8	1	0	0	1	1	1	0	Shikimate	kinase
DUF1912	PF08930.5	gi|568163978|ref|YP_008947415.1|	-	0.029	14.4	2.0	0.98	9.5	0.2	3.3	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF1912)
NB-ARC	PF00931.17	gi|568163978|ref|YP_008947415.1|	-	0.047	12.5	0.0	0.084	11.7	0.0	1.4	1	0	0	1	1	1	0	NB-ARC	domain
AAA_28	PF13521.1	gi|568163978|ref|YP_008947415.1|	-	0.059	13.3	0.0	0.17	11.8	0.0	1.8	2	0	0	2	2	1	0	AAA	domain
Fe_hyd_SSU	PF02256.12	gi|568163978|ref|YP_008947415.1|	-	0.059	13.3	0.1	0.19	11.7	0.1	1.9	1	0	0	1	1	1	0	Iron	hydrogenase	small	subunit
ABC_tran	PF00005.22	gi|568163978|ref|YP_008947415.1|	-	0.061	13.6	0.0	0.41	10.9	0.0	2.1	2	1	0	2	2	2	0	ABC	transporter
TPR_1	PF00515.23	gi|568163978|ref|YP_008947415.1|	-	0.11	12.1	0.5	0.35	10.5	0.1	2.0	2	0	0	2	2	1	0	Tetratricopeptide	repeat
CesA	PF11439.3	gi|568163978|ref|YP_008947415.1|	-	0.2	11.6	2.8	15	5.5	0.0	2.6	2	1	0	2	2	2	0	Type	III	secretion	system	filament	chaperone	CesA
AAA_23	PF13476.1	gi|568163978|ref|YP_008947415.1|	-	2.9	8.1	0.0	2.9	8.1	0.0	3.0	3	1	0	3	3	3	0	AAA	domain
Snf7	PF03357.16	gi|568163979|ref|YP_008947416.1|	-	5.6e-06	25.8	3.6	1e-05	24.9	2.5	1.5	1	1	0	1	1	1	1	Snf7
HTH_27	PF13463.1	gi|568163979|ref|YP_008947416.1|	-	6e-06	26.4	0.1	0.0028	17.9	0.0	2.6	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
DUF3231	PF11553.3	gi|568163979|ref|YP_008947416.1|	-	0.00018	21.0	0.1	0.00032	20.2	0.1	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3231)
MarR	PF01047.17	gi|568163979|ref|YP_008947416.1|	-	0.00031	20.3	0.0	0.00075	19.1	0.0	1.7	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.2	gi|568163979|ref|YP_008947416.1|	-	0.00097	18.7	0.0	0.0026	17.4	0.0	1.8	1	0	0	1	1	1	1	MarR	family
HTH_36	PF13730.1	gi|568163979|ref|YP_008947416.1|	-	0.0012	18.9	0.0	0.0034	17.4	0.0	1.8	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|568163979|ref|YP_008947416.1|	-	0.0013	18.3	0.2	0.012	15.2	0.0	2.4	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
Fe_dep_repress	PF01325.14	gi|568163979|ref|YP_008947416.1|	-	0.0014	18.4	0.0	0.0042	16.9	0.0	1.9	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
EAP30	PF04157.11	gi|568163979|ref|YP_008947416.1|	-	0.0037	16.4	2.6	0.0045	16.1	0.0	2.2	3	0	0	3	3	3	1	EAP30/Vps36	family
RPA_C	PF08784.6	gi|568163979|ref|YP_008947416.1|	-	0.004	17.5	0.0	0.01	16.2	0.0	1.7	1	1	0	1	1	1	1	Replication	protein	A	C	terminal
HTH_24	PF13412.1	gi|568163979|ref|YP_008947416.1|	-	0.0042	16.4	0.0	0.015	14.6	0.0	2.0	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
DUF2250	PF10007.4	gi|568163979|ref|YP_008947416.1|	-	0.0086	15.9	0.7	0.034	14.0	0.0	2.4	3	0	0	3	3	3	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_DeoR	PF08220.7	gi|568163979|ref|YP_008947416.1|	-	0.011	15.2	0.2	0.033	13.7	0.0	1.9	2	0	0	2	2	1	0	DeoR-like	helix-turn-helix	domain
HTH_11	PF08279.7	gi|568163979|ref|YP_008947416.1|	-	0.014	15.0	0.3	0.053	13.1	0.0	2.2	2	0	0	2	2	2	0	HTH	domain
Rrf2	PF02082.15	gi|568163979|ref|YP_008947416.1|	-	0.025	14.6	0.0	0.18	11.9	0.0	2.4	2	0	0	2	2	2	0	Transcriptional	regulator
FeoC	PF09012.5	gi|568163979|ref|YP_008947416.1|	-	0.038	13.7	0.0	0.11	12.1	0.0	1.8	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
NIT	PF08376.5	gi|568163979|ref|YP_008947416.1|	-	0.071	12.6	0.6	0.13	11.7	0.4	1.3	1	0	0	1	1	1	0	Nitrate	and	nitrite	sensing
TMP_2	PF06791.8	gi|568163979|ref|YP_008947416.1|	-	0.081	12.5	0.1	0.2	11.2	0.0	1.8	1	1	0	1	1	1	0	Prophage	tail	length	tape	measure	protein
HTH_10	PF04967.7	gi|568163979|ref|YP_008947416.1|	-	0.082	12.5	0.0	0.36	10.4	0.0	2.1	1	0	0	1	1	1	0	HTH	DNA	binding	domain
DUF1836	PF08876.6	gi|568163979|ref|YP_008947416.1|	-	0.18	11.6	2.3	0.46	10.2	0.4	2.5	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF1836)
DDRGK	PF09756.4	gi|568163979|ref|YP_008947416.1|	-	0.8	9.0	8.2	0.063	12.6	1.2	2.2	2	1	0	2	2	2	0	DDRGK	domain
Acetyltransf_11	PF13720.1	gi|568163979|ref|YP_008947416.1|	-	4.9	7.4	6.0	1.8	8.8	0.1	2.8	2	1	1	3	3	2	0	Udp	N-acetylglucosamine	O-acyltransferase;	Domain	2
NPV_P10	PF05531.7	gi|568163980|ref|YP_008947417.1|	-	0.1	12.8	1.1	8.6	6.6	0.1	2.6	2	1	0	2	2	2	0	Nucleopolyhedrovirus	P10	protein
Herpes_UL25	PF01499.11	gi|568163980|ref|YP_008947417.1|	-	0.15	10.3	0.6	0.17	10.1	0.4	1.1	1	0	0	1	1	1	0	Herpesvirus	UL25	family
SHOCT	PF09851.4	gi|568163980|ref|YP_008947417.1|	-	0.23	10.9	4.0	0.1	12.1	0.6	2.2	2	0	0	2	2	2	0	Short	C-terminal	domain
PRC	PF05239.11	gi|568163980|ref|YP_008947417.1|	-	0.29	11.0	4.1	0.51	10.2	2.8	1.4	1	0	0	1	1	1	0	PRC-barrel	domain
SPX	PF03105.14	gi|568163980|ref|YP_008947417.1|	-	0.31	10.7	3.8	0.54	9.9	2.6	1.4	1	1	0	1	1	1	0	SPX	domain
DUF883	PF05957.8	gi|568163980|ref|YP_008947417.1|	-	1.5	9.2	3.9	0.63	10.4	1.1	1.6	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF883)
DUF904	PF06005.7	gi|568163980|ref|YP_008947417.1|	-	2.4	8.5	10.4	5.7	7.3	2.9	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF904)
DUF724	PF05266.9	gi|568163980|ref|YP_008947417.1|	-	4.1	6.9	7.4	1.2	8.7	2.3	1.9	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF724)
Syntaxin	PF00804.20	gi|568163980|ref|YP_008947417.1|	-	6.5	6.9	9.4	35	4.6	6.5	2.2	1	1	0	1	1	1	0	Syntaxin
Oxidored_q5_N	PF01059.12	gi|568163981|ref|YP_008947418.1|	-	0.00059	19.6	2.5	0.00067	19.5	1.8	1.2	1	0	0	1	1	1	1	NADH-ubiquinone	oxidoreductase	chain	4,	amino	terminus
Phlebovirus_G2	PF07245.6	gi|568163981|ref|YP_008947418.1|	-	0.011	14.1	1.2	0.011	14.1	0.8	1.4	1	1	1	2	2	2	0	Phlebovirus	glycoprotein	G2
Yip1	PF04893.12	gi|568163981|ref|YP_008947418.1|	-	0.073	12.5	6.2	0.099	12.1	4.3	1.3	1	0	0	1	1	1	0	Yip1	domain
Phlebovirus_G1	PF07243.6	gi|568163981|ref|YP_008947418.1|	-	0.076	11.1	2.3	0.086	10.9	1.6	1.1	1	0	0	1	1	1	0	Phlebovirus	glycoprotein	G1
Fig1	PF12351.3	gi|568163981|ref|YP_008947418.1|	-	0.12	12.2	6.0	0.13	12.1	4.2	1.1	1	0	0	1	1	1	0	Ca2+	regulator	and	membrane	fusion	protein	Fig1
DUF3975	PF13126.1	gi|568163981|ref|YP_008947418.1|	-	1.2	9.3	6.9	1.5	9.0	4.8	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3975)
Tetraspannin	PF00335.15	gi|568163981|ref|YP_008947418.1|	-	2.5	7.3	8.9	3.6	6.7	6.2	1.2	1	0	0	1	1	1	0	Tetraspanin	family
DUF751	PF05421.6	gi|568163981|ref|YP_008947418.1|	-	3.6	7.9	10.8	3.4	8.0	4.7	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF751)
SHR3_chaperone	PF08229.6	gi|568163981|ref|YP_008947418.1|	-	5.7	5.8	5.8	7.5	5.4	4.0	1.2	1	0	0	1	1	1	0	ER	membrane	protein	SH3
DUF2929	PF11151.3	gi|568163981|ref|YP_008947418.1|	-	5.9	7.0	13.0	0.73	9.9	0.5	2.1	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2929)
Glycoprotein_B	PF00606.13	gi|568163981|ref|YP_008947418.1|	-	6.4	4.6	5.5	1.1	7.1	1.4	1.4	1	1	1	2	2	2	0	Herpesvirus	Glycoprotein	B
Enolase_C	PF00113.17	gi|568163982|ref|YP_008947419.1|	-	3.1e-93	312.0	0.1	4e-93	311.6	0.1	1.1	1	0	0	1	1	1	1	Enolase,	C-terminal	TIM	barrel	domain
Enolase_N	PF03952.11	gi|568163982|ref|YP_008947419.1|	-	6.1e-38	129.7	0.2	1.1e-37	128.9	0.1	1.4	1	0	0	1	1	1	1	Enolase,	N-terminal	domain
MR_MLE	PF01188.16	gi|568163982|ref|YP_008947419.1|	-	0.0037	17.7	0.0	0.0085	16.6	0.0	1.6	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
Claudin_3	PF06653.6	gi|568163983|ref|YP_008947420.1|	-	1.2	8.8	9.3	1.4	8.6	6.4	1.1	1	0	0	1	1	1	0	Tight	junction	protein,	Claudin-like
DUF2614	PF11023.3	gi|568163983|ref|YP_008947420.1|	-	9.2	6.0	10.3	6.5	6.5	5.9	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2614)
Zn-ribbon_8	PF09723.5	gi|568163984|ref|YP_008947421.1|	-	0.0015	18.4	1.5	0.79	9.7	0.3	2.3	2	0	0	2	2	2	2	Zinc	ribbon	domain
Cren7	PF11520.3	gi|568163984|ref|YP_008947421.1|	-	0.0038	16.8	1.6	0.0049	16.4	0.4	1.9	1	1	0	1	1	1	1	Chromatin	protein	Cren7
CpXC	PF14353.1	gi|568163984|ref|YP_008947421.1|	-	0.004	17.1	0.0	0.0066	16.4	0.0	1.3	1	0	0	1	1	1	1	CpXC	protein
Zn_Tnp_IS1595	PF12760.2	gi|568163984|ref|YP_008947421.1|	-	0.0046	16.7	1.1	0.012	15.3	0.8	1.6	1	1	0	1	1	1	1	Transposase	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|568163984|ref|YP_008947421.1|	-	0.0071	15.5	6.5	0.031	13.4	0.2	2.3	2	0	0	2	2	2	1	zinc-ribbon	domain
DZR	PF12773.2	gi|568163984|ref|YP_008947421.1|	-	0.0077	16.0	0.8	0.023	14.4	0.6	1.7	1	1	0	1	1	1	1	Double	zinc	ribbon
zf-ZPR1	PF03367.8	gi|568163984|ref|YP_008947421.1|	-	0.0089	15.1	0.1	0.013	14.6	0.1	1.4	1	1	0	1	1	1	1	ZPR1	zinc-finger	domain
zinc_ribbon_2	PF13240.1	gi|568163984|ref|YP_008947421.1|	-	0.012	15.0	6.1	0.17	11.4	0.5	2.2	1	1	1	2	2	2	0	zinc-ribbon	domain
zf-ISL3	PF14690.1	gi|568163984|ref|YP_008947421.1|	-	0.013	15.5	0.3	0.41	10.7	0.0	2.3	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
UPF0547	PF10571.4	gi|568163984|ref|YP_008947421.1|	-	0.013	15.2	5.2	1.2	8.9	0.2	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zf-IS66	PF13005.2	gi|568163984|ref|YP_008947421.1|	-	0.014	15.3	0.4	0.014	15.3	0.3	1.9	2	1	0	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
zf-3CxxC	PF13695.1	gi|568163984|ref|YP_008947421.1|	-	0.015	15.4	0.5	0.058	13.6	0.1	2.0	2	0	0	2	2	2	0	Zinc-binding	domain
OrfB_Zn_ribbon	PF07282.6	gi|568163984|ref|YP_008947421.1|	-	0.019	14.6	0.5	6	6.6	0.0	2.4	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
DUF4379	PF14311.1	gi|568163984|ref|YP_008947421.1|	-	0.023	14.4	2.4	0.035	13.9	0.2	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4379)
zinc_ribbon_5	PF13719.1	gi|568163984|ref|YP_008947421.1|	-	0.028	13.9	6.6	0.34	10.5	0.1	2.8	3	0	0	3	3	3	0	zinc-ribbon	domain
Ogr_Delta	PF04606.7	gi|568163984|ref|YP_008947421.1|	-	0.052	13.2	1.9	1.8	8.2	0.1	2.2	2	0	0	2	2	2	0	Ogr/Delta-like	zinc	finger
zf-NADH-PPase	PF09297.6	gi|568163984|ref|YP_008947421.1|	-	0.058	12.9	0.7	9	5.9	0.0	2.3	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
TFIIS_C	PF01096.13	gi|568163984|ref|YP_008947421.1|	-	0.077	12.6	6.1	0.15	11.7	0.4	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zf-nanos	PF05741.8	gi|568163984|ref|YP_008947421.1|	-	0.093	12.7	1.4	3.3	7.7	1.1	2.2	1	1	1	2	2	2	0	Nanos	RNA	binding	domain
zinc_ribbon_4	PF13717.1	gi|568163984|ref|YP_008947421.1|	-	0.097	12.3	7.1	0.8	9.4	0.2	2.8	3	0	0	3	3	3	0	zinc-ribbon	domain
zf-H2C2_2	PF13465.1	gi|568163984|ref|YP_008947421.1|	-	0.22	11.9	1.0	11	6.4	0.2	2.3	2	0	0	2	2	2	0	Zinc-finger	double	domain
Cys_rich_CPXG	PF14255.1	gi|568163984|ref|YP_008947421.1|	-	0.36	10.6	1.6	17	5.2	0.0	2.7	3	0	0	3	3	3	0	Cysteine-rich	CPXCG
zf-TFIIB	PF13453.1	gi|568163984|ref|YP_008947421.1|	-	0.42	9.8	2.2	0.59	9.3	0.0	2.1	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
DNA_RNApol_7kD	PF03604.8	gi|568163984|ref|YP_008947421.1|	-	0.46	9.9	2.4	2.8	7.4	0.1	2.4	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
TF_Zn_Ribbon	PF08271.7	gi|568163984|ref|YP_008947421.1|	-	3.3	7.1	8.8	3.4	7.0	0.2	2.8	3	0	0	3	3	3	0	TFIIB	zinc-binding
DUF1610	PF07754.6	gi|568163984|ref|YP_008947421.1|	-	6.9	6.8	10.8	2.2	8.4	1.9	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
Peptidase_S24	PF00717.18	gi|568163985|ref|YP_008947422.1|	-	0.00064	19.3	0.3	0.00092	18.8	0.2	1.3	1	0	0	1	1	1	1	Peptidase	S24-like
DUF2649	PF10854.3	gi|568163985|ref|YP_008947422.1|	-	0.11	12.6	0.5	0.24	11.5	0.3	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2649)
GDC-P	PF02347.11	gi|568163986|ref|YP_008947423.1|	-	3.9e-15	55.4	0.0	6.5e-14	51.4	0.0	2.0	2	0	0	2	2	2	1	Glycine	cleavage	system	P-protein
Aminotran_5	PF00266.14	gi|568163986|ref|YP_008947423.1|	-	6.8e-07	28.3	0.0	1.7e-06	27.0	0.0	1.7	1	1	0	1	1	1	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.16	gi|568163986|ref|YP_008947423.1|	-	0.0038	16.4	0.0	0.0061	15.7	0.0	1.3	1	0	0	1	1	1	1	Beta-eliminating	lyase
GDC-P	PF02347.11	gi|568163987|ref|YP_008947424.1|	-	3.5e-119	398.2	0.0	4.6e-119	397.9	0.0	1.0	1	0	0	1	1	1	1	Glycine	cleavage	system	P-protein
GCV_T	PF01571.16	gi|568163988|ref|YP_008947425.1|	-	3.7e-49	166.9	0.0	4.6e-49	166.6	0.0	1.1	1	0	0	1	1	1	1	Aminomethyltransferase	folate-binding	domain
GCV_T_C	PF08669.6	gi|568163988|ref|YP_008947425.1|	-	3.8e-20	71.7	0.0	5.7e-20	71.1	0.0	1.3	1	0	0	1	1	1	1	Glycine	cleavage	T-protein	C-terminal	barrel	domain
GCV_H	PF01597.14	gi|568163989|ref|YP_008947426.1|	-	1.7e-42	143.9	0.5	1.9e-42	143.7	0.3	1.0	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
Biotin_lipoyl	PF00364.17	gi|568163989|ref|YP_008947426.1|	-	0.00068	19.2	0.1	0.0016	18.0	0.1	1.5	1	0	0	1	1	1	1	Biotin-requiring	enzyme
RnfC_N	PF13375.1	gi|568163989|ref|YP_008947426.1|	-	0.0052	16.4	0.7	0.012	15.3	0.1	1.8	2	0	0	2	2	2	1	RnfC	Barrel	sandwich	hybrid	domain
PAC2	PF09754.4	gi|568163990|ref|YP_008947427.1|	-	8.5e-37	127.1	0.0	1e-36	126.8	0.0	1.0	1	0	0	1	1	1	1	PAC2	family
SF-assemblin	PF06705.6	gi|568163991|ref|YP_008947428.1|	-	0.021	13.9	1.0	0.023	13.8	0.7	1.2	1	0	0	1	1	1	0	SF-assemblin/beta	giardin
Shikimate_DH	PF01488.15	gi|568163991|ref|YP_008947428.1|	-	0.056	13.5	0.0	0.073	13.1	0.0	1.2	1	1	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
ArsR	PF09824.4	gi|568163991|ref|YP_008947428.1|	-	0.069	12.4	1.0	0.099	11.9	0.5	1.3	1	1	0	1	1	1	0	ArsR	transcriptional	regulator
IATP	PF04568.7	gi|568163991|ref|YP_008947428.1|	-	0.092	12.7	3.2	5.5	7.0	2.6	2.1	1	1	1	2	2	2	0	Mitochondrial	ATPase	inhibitor,	IATP
DUF883	PF05957.8	gi|568163991|ref|YP_008947428.1|	-	0.1	12.9	0.2	0.17	12.3	0.1	1.4	1	1	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF883)
Hemagglutinin	PF00509.13	gi|568163991|ref|YP_008947428.1|	-	0.15	10.1	0.6	0.17	9.9	0.4	1.0	1	0	0	1	1	1	0	Haemagglutinin
MutS_IV	PF05190.13	gi|568163991|ref|YP_008947428.1|	-	0.21	11.7	2.6	0.41	10.8	1.6	1.8	1	1	0	1	1	1	0	MutS	family	domain	IV
HSCB_C	PF07743.8	gi|568163991|ref|YP_008947428.1|	-	0.35	11.3	5.2	0.18	12.2	0.9	2.0	2	0	0	2	2	2	0	HSCB	C-terminal	oligomerisation	domain
Transposase_22	PF02994.9	gi|568163991|ref|YP_008947428.1|	-	1.8	6.9	8.3	3.8	5.9	0.0	2.0	1	1	1	2	2	2	0	L1	transposable	element
Antitoxin-MazE	PF04014.13	gi|568163992|ref|YP_008947429.1|	-	6.6e-09	35.2	0.2	1.8e-08	33.9	0.2	1.8	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
Ins_allergen_rp	PF06757.8	gi|568163992|ref|YP_008947429.1|	-	0.011	15.2	1.3	0.72	9.3	0.8	2.8	1	1	0	1	1	1	0	Insect	allergen	related	repeat,	nitrile-specifier	detoxification
DED	PF01335.16	gi|568163992|ref|YP_008947429.1|	-	0.85	9.7	4.7	0.29	11.2	0.7	2.2	2	0	0	2	2	2	0	Death	effector	domain
ABC_tran	PF00005.22	gi|568163993|ref|YP_008947430.1|	-	3.8e-23	82.2	0.2	5.2e-23	81.8	0.2	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|568163993|ref|YP_008947430.1|	-	1.4e-11	44.9	1.7	9e-11	42.2	1.2	1.9	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|568163993|ref|YP_008947430.1|	-	2.4e-07	30.2	0.9	7.4e-07	28.6	0.6	1.7	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
DUF258	PF03193.11	gi|568163993|ref|YP_008947430.1|	-	0.0053	15.9	0.1	0.0093	15.1	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_29	PF13555.1	gi|568163993|ref|YP_008947430.1|	-	0.0074	15.7	0.1	0.016	14.7	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|568163993|ref|YP_008947430.1|	-	0.012	15.9	1.1	0.018	15.3	0.7	1.5	1	1	0	1	1	1	0	AAA	domain
AAA_25	PF13481.1	gi|568163993|ref|YP_008947430.1|	-	0.016	14.6	0.0	0.03	13.7	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|568163993|ref|YP_008947430.1|	-	0.017	15.3	0.2	0.042	14.0	0.2	1.8	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_13	PF13166.1	gi|568163993|ref|YP_008947430.1|	-	0.019	13.4	0.1	0.043	12.2	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
AAA_22	PF13401.1	gi|568163993|ref|YP_008947430.1|	-	0.038	14.1	0.1	0.09	12.9	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
Arch_ATPase	PF01637.13	gi|568163993|ref|YP_008947430.1|	-	0.049	13.3	0.1	0.078	12.6	0.1	1.3	1	0	0	1	1	1	0	Archaeal	ATPase
PduV-EutP	PF10662.4	gi|568163993|ref|YP_008947430.1|	-	0.076	12.5	0.0	0.13	11.7	0.0	1.3	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_33	PF13671.1	gi|568163993|ref|YP_008947430.1|	-	0.086	12.7	0.0	0.12	12.2	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
UPF0079	PF02367.12	gi|568163993|ref|YP_008947430.1|	-	0.12	11.9	0.1	0.26	10.9	0.0	1.5	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
UPF0051	PF01458.12	gi|568163994|ref|YP_008947431.1|	-	7e-59	199.0	0.0	1e-58	198.5	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
UPF0051	PF01458.12	gi|568163995|ref|YP_008947432.1|	-	7.3e-43	146.6	1.0	9.5e-43	146.2	0.7	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
DUF1977	PF09320.6	gi|568163995|ref|YP_008947432.1|	-	0.1	12.8	0.3	14	5.9	0.0	2.6	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF1977)
RHH_1	PF01402.16	gi|568163996|ref|YP_008947433.1|	-	8.9e-10	38.0	0.6	9.6e-10	37.9	0.4	1.0	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
RHH_3	PF12651.2	gi|568163996|ref|YP_008947433.1|	-	1.5e-05	24.6	2.0	2.1e-05	24.1	1.4	1.3	1	1	0	1	1	1	1	Ribbon-helix-helix	domain
DUF2191	PF09957.4	gi|568163996|ref|YP_008947433.1|	-	0.021	14.6	1.4	0.11	12.2	1.0	1.9	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2191)
ADH_N	PF08240.7	gi|568163997|ref|YP_008947434.1|	-	3.6e-28	97.5	0.6	8.3e-28	96.3	0.1	1.8	2	0	0	2	2	2	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|568163997|ref|YP_008947434.1|	-	5.9e-22	77.6	0.1	1.4e-21	76.3	0.1	1.7	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|568163997|ref|YP_008947434.1|	-	7e-08	33.4	0.0	2.6e-07	31.5	0.0	1.8	2	0	0	2	2	2	1	Zinc-binding	dehydrogenase
NAD_binding_10	PF13460.1	gi|568163997|ref|YP_008947434.1|	-	0.0023	17.9	0.2	0.0039	17.2	0.1	1.5	1	1	0	1	1	1	1	NADH(P)-binding
AlaDh_PNT_C	PF01262.16	gi|568163997|ref|YP_008947434.1|	-	0.0026	17.3	0.0	0.0057	16.2	0.0	1.5	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
YjeF_N	PF03853.10	gi|568163997|ref|YP_008947434.1|	-	0.012	15.2	0.1	0.02	14.5	0.1	1.4	1	1	0	1	1	1	0	YjeF-related	protein	N-terminus
DapB_N	PF01113.15	gi|568163997|ref|YP_008947434.1|	-	0.025	14.4	1.1	0.64	9.9	0.8	2.5	1	1	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
SIS_2	PF13580.1	gi|568163997|ref|YP_008947434.1|	-	0.055	13.1	0.2	0.2	11.3	0.1	2.1	1	1	0	1	1	1	0	SIS	domain
tRNA-synt_1d	PF00750.14	gi|568163998|ref|YP_008947435.1|	-	4.2e-46	157.3	1.0	5.4e-24	84.6	0.3	2.3	1	1	0	2	2	2	2	tRNA	synthetases	class	I	(R)
DALR_1	PF05746.10	gi|568163998|ref|YP_008947435.1|	-	1.9e-24	85.8	0.0	5.7e-24	84.3	0.0	1.9	2	0	0	2	2	2	1	DALR	anticodon	binding	domain
tRNA-synt_1e	PF01406.14	gi|568163998|ref|YP_008947435.1|	-	0.00059	19.0	0.4	0.37	9.8	0.1	2.8	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1g	PF09334.6	gi|568163998|ref|YP_008947435.1|	-	0.0018	17.0	0.3	0.036	12.7	0.1	2.7	3	0	0	3	3	3	1	tRNA	synthetases	class	I	(M)
tRNA-synt_1	PF00133.17	gi|568163998|ref|YP_008947435.1|	-	0.0043	15.1	0.4	0.012	13.7	0.0	1.8	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
MutS_III	PF05192.13	gi|568163998|ref|YP_008947435.1|	-	0.022	14.5	0.7	0.05	13.3	0.5	1.8	1	1	0	1	1	1	0	MutS	domain	III
FlgN	PF05130.7	gi|568163998|ref|YP_008947435.1|	-	0.042	14.1	0.1	16	5.7	0.0	2.6	2	0	0	2	2	2	0	FlgN	protein
tRNA-synt_1f	PF01921.13	gi|568163998|ref|YP_008947435.1|	-	0.096	11.3	0.5	4.6	5.8	0.0	2.9	3	0	0	3	3	3	0	tRNA	synthetases	class	I	(K)
DOT1	PF08123.8	gi|568163999|ref|YP_008947436.1|	-	0.21	10.8	1.3	0.21	10.8	0.9	1.1	1	0	0	1	1	1	0	Histone	methylation	protein	DOT1
Imm11	PF15563.1	gi|568164000|ref|YP_008947437.1|	-	0.055	12.5	0.0	0.073	12.1	0.0	1.1	1	0	0	1	1	1	0	Immunity	protein	11
DUF763	PF05559.6	gi|568164001|ref|YP_008947438.1|	-	0.01	14.8	0.3	0.011	14.6	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF763)
TrmB	PF01978.14	gi|568164001|ref|YP_008947438.1|	-	0.015	14.9	0.1	0.029	14.0	0.1	1.4	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_9	PF08221.6	gi|568164001|ref|YP_008947438.1|	-	0.028	14.2	0.0	0.041	13.7	0.0	1.2	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
DRP	PF06044.7	gi|568164001|ref|YP_008947438.1|	-	0.034	13.1	0.0	0.037	13.0	0.0	1.3	1	1	0	1	1	1	0	Dam-replacing	family
DDE_Tnp_1_assoc	PF13808.1	gi|568164001|ref|YP_008947438.1|	-	0.039	13.6	0.0	0.05	13.2	0.0	1.2	1	0	0	1	1	1	0	DDE_Tnp_1-associated
DUF4423	PF14394.1	gi|568164001|ref|YP_008947438.1|	-	0.097	12.2	0.3	0.14	11.6	0.2	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
RPT	PF13446.1	gi|568164001|ref|YP_008947438.1|	-	0.21	11.0	0.8	1.4	8.4	0.5	2.3	1	1	0	1	1	1	0	A	repeated	domain	in	UCH-protein
Imm47	PF15586.1	gi|568164002|ref|YP_008947439.1|	-	0.018	14.8	0.0	0.031	14.1	0.0	1.4	1	0	0	1	1	1	0	Immunity	protein	47
CLU_N	PF15044.1	gi|568164002|ref|YP_008947439.1|	-	0.049	13.7	0.0	0.073	13.2	0.0	1.3	1	1	0	1	1	1	0	Mitochondrial	function,	CLU-N-term
Cpn60_TCP1	PF00118.19	gi|568164003|ref|YP_008947440.1|	-	5e-160	533.3	14.9	5.6e-160	533.1	10.4	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
MCR_alpha_N	PF02745.10	gi|568164003|ref|YP_008947440.1|	-	0.011	14.9	0.5	0.033	13.3	0.1	1.9	2	0	0	2	2	2	0	Methyl-coenzyme	M	reductase	alpha	subunit,	N-terminal	domain
Alba	PF01918.16	gi|568164003|ref|YP_008947440.1|	-	0.058	12.9	0.2	2.6	7.6	0.0	3.1	3	0	0	3	3	3	0	Alba
DZR	PF12773.2	gi|568164874|ref|YP_008947441.1|	-	0.00028	20.6	7.3	0.0075	16.0	1.1	2.4	2	0	0	2	2	2	2	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|568164874|ref|YP_008947441.1|	-	0.00056	19.0	9.3	0.0034	16.5	1.6	2.9	2	1	1	3	3	3	1	zinc-ribbon	domain
Zn_Tnp_IS91	PF14319.1	gi|568164874|ref|YP_008947441.1|	-	0.007	15.8	1.3	0.038	13.4	0.0	2.2	2	0	0	2	2	2	1	Transposase	zinc-binding	domain
Hs1pro-1_C	PF07014.7	gi|568164874|ref|YP_008947441.1|	-	0.019	14.2	0.5	0.029	13.7	0.3	1.2	1	0	0	1	1	1	0	Hs1pro-1	protein	C-terminus
Cript	PF10235.4	gi|568164874|ref|YP_008947441.1|	-	0.027	14.8	0.5	0.027	14.8	0.4	2.8	2	1	0	2	2	2	0	Microtubule-associated	protein	CRIPT
zf-FPG_IleRS	PF06827.9	gi|568164874|ref|YP_008947441.1|	-	0.045	13.3	8.0	0.14	11.7	1.9	3.0	2	1	1	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
FYVE	PF01363.16	gi|568164874|ref|YP_008947441.1|	-	0.11	12.3	4.5	3.2	7.7	0.4	2.4	2	0	0	2	2	2	0	FYVE	zinc	finger
zinc_ribbon_2	PF13240.1	gi|568164874|ref|YP_008947441.1|	-	0.17	11.4	17.0	0.13	11.7	4.2	3.2	3	0	0	3	3	3	0	zinc-ribbon	domain
zf-FCS	PF06467.9	gi|568164874|ref|YP_008947441.1|	-	0.32	10.6	4.7	4.5	6.9	0.7	3.2	2	1	1	3	3	3	0	MYM-type	Zinc	finger	with	FCS	sequence	motif
DUF2318	PF10080.4	gi|568164874|ref|YP_008947441.1|	-	0.82	9.4	6.4	0.97	9.2	0.5	2.4	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2318)
UPF0547	PF10571.4	gi|568164874|ref|YP_008947441.1|	-	4.5	7.0	7.8	0.56	9.9	0.3	2.8	3	0	0	3	3	3	0	Uncharacterised	protein	family	UPF0547
DNA_RNApol_7kD	PF03604.8	gi|568164004|ref|YP_008947442.1|	-	0.065	12.7	1.4	0.15	11.5	0.0	2.1	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
DUF3782	PF12644.2	gi|568164004|ref|YP_008947442.1|	-	0.16	11.8	4.3	0.4	10.4	1.3	2.6	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3782)
FKBP_N	PF01346.13	gi|568164005|ref|YP_008947443.1|	-	0.22	11.5	2.9	0.3	11.1	2.0	1.2	1	0	0	1	1	1	0	Domain	amino	terminal	to	FKBP-type	peptidyl-prolyl	isomerase
HTH_45	PF14947.1	gi|568164006|ref|YP_008947444.1|	-	7e-05	22.5	0.7	0.00021	21.0	0.1	2.0	2	0	0	2	2	2	1	Winged	helix-turn-helix
Rrf2	PF02082.15	gi|568164006|ref|YP_008947444.1|	-	0.0005	20.1	0.0	0.034	14.2	0.0	2.9	2	1	1	3	3	3	1	Transcriptional	regulator
TrmB	PF01978.14	gi|568164006|ref|YP_008947444.1|	-	0.0032	17.1	0.0	0.011	15.3	0.0	2.0	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
PPO1_KFDV	PF12143.3	gi|568164006|ref|YP_008947444.1|	-	0.0087	15.9	1.2	0.016	15.1	0.8	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF_B2219)
HTH_23	PF13384.1	gi|568164006|ref|YP_008947444.1|	-	0.0098	15.5	0.0	0.031	13.9	0.0	1.8	1	0	0	1	1	1	1	Homeodomain-like	domain
FeoC	PF09012.5	gi|568164006|ref|YP_008947444.1|	-	0.011	15.4	0.0	0.026	14.2	0.0	1.6	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
Bromo_MP	PF01573.11	gi|568164006|ref|YP_008947444.1|	-	0.016	14.2	1.1	0.041	12.8	0.6	1.7	2	0	0	2	2	2	0	Bromovirus	movement	protein
HTH_5	PF01022.15	gi|568164006|ref|YP_008947444.1|	-	0.018	14.6	0.0	0.04	13.5	0.0	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
MarR	PF01047.17	gi|568164006|ref|YP_008947444.1|	-	0.018	14.7	0.0	8.3	6.1	0.0	2.7	2	0	0	2	2	2	0	MarR	family
MarR_2	PF12802.2	gi|568164006|ref|YP_008947444.1|	-	0.024	14.2	0.0	0.06	13.0	0.0	1.6	1	0	0	1	1	1	0	MarR	family
HTH_29	PF13551.1	gi|568164006|ref|YP_008947444.1|	-	0.089	12.9	0.1	1.2	9.2	0.0	2.4	2	1	1	3	3	3	0	Winged	helix-turn	helix
DUF4163	PF13739.1	gi|568164006|ref|YP_008947444.1|	-	0.17	12.6	6.3	0.34	11.7	4.4	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4163)
Arch_ATPase	PF01637.13	gi|568164006|ref|YP_008947444.1|	-	0.95	9.1	8.8	1.1	8.8	5.4	1.6	1	1	0	1	1	1	0	Archaeal	ATPase
NAD_kinase	PF01513.16	gi|568164007|ref|YP_008947445.1|	-	2.7e-48	164.2	0.1	2.9e-48	164.0	0.0	1.0	1	0	0	1	1	1	1	ATP-NAD	kinase
DAGK_cat	PF00781.19	gi|568164007|ref|YP_008947445.1|	-	0.0023	17.3	0.0	0.014	14.8	0.0	2.1	2	0	0	2	2	2	1	Diacylglycerol	kinase	catalytic	domain
HTH_12	PF08461.5	gi|568164008|ref|YP_008947446.1|	-	0.0013	18.4	0.3	0.0027	17.4	0.2	1.6	1	0	0	1	1	1	1	Ribonuclease	R	winged-helix	domain
Ribosomal_S19e	PF01090.14	gi|568164008|ref|YP_008947446.1|	-	0.01	15.2	0.0	0.02	14.3	0.0	1.5	1	0	0	1	1	1	0	Ribosomal	protein	S19e
HTH_45	PF14947.1	gi|568164008|ref|YP_008947446.1|	-	0.032	14.0	0.1	0.088	12.6	0.0	1.8	1	0	0	1	1	1	0	Winged	helix-turn-helix
Fe_dep_repress	PF01325.14	gi|568164008|ref|YP_008947446.1|	-	0.048	13.5	0.0	0.092	12.6	0.0	1.4	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
MarR	PF01047.17	gi|568164008|ref|YP_008947446.1|	-	0.065	12.9	0.2	0.12	12.0	0.1	1.4	1	0	0	1	1	1	0	MarR	family
HTH_27	PF13463.1	gi|568164008|ref|YP_008947446.1|	-	0.072	13.4	0.0	0.16	12.3	0.0	1.6	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_11	PF08279.7	gi|568164008|ref|YP_008947446.1|	-	0.078	12.6	0.6	0.22	11.1	0.1	2.0	2	0	0	2	2	2	0	HTH	domain
Replic_Relax	PF13814.1	gi|568164008|ref|YP_008947446.1|	-	0.14	11.9	0.0	0.19	11.5	0.0	1.2	1	0	0	1	1	1	0	Replication-relaxation
SporV_AA	PF12164.3	gi|568164008|ref|YP_008947446.1|	-	0.24	11.3	1.9	2	8.4	1.0	2.4	2	1	0	2	2	2	0	Stage	V	sporulation	protein	AA
OTCace	PF00185.19	gi|568164009|ref|YP_008947447.1|	-	1e-50	171.6	0.1	1.6e-50	171.0	0.0	1.3	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
OTCace_N	PF02729.16	gi|568164009|ref|YP_008947447.1|	-	1.1e-45	154.7	0.0	1.7e-45	154.1	0.0	1.3	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
DUF650	PF04894.7	gi|568164010|ref|YP_008947448.1|	-	8.5e-98	327.1	0.2	1.7e-97	326.1	0.0	1.5	2	0	0	2	2	2	1	Archaeal	protein	of	unknown	function	(DUF650)
DUF651	PF04895.7	gi|568164010|ref|YP_008947448.1|	-	9.1e-37	125.0	0.1	1.7e-36	124.1	0.0	1.4	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF651)
PHP_C	PF13263.1	gi|568164011|ref|YP_008947449.1|	-	5e-13	48.3	0.0	9.3e-13	47.4	0.0	1.5	1	0	0	1	1	1	1	PHP-associated
PHP	PF02811.14	gi|568164011|ref|YP_008947449.1|	-	3e-11	43.4	0.0	4.4e-11	42.8	0.0	1.4	1	1	0	1	1	1	1	PHP	domain
Semialdhyde_dh	PF01118.19	gi|568164012|ref|YP_008947450.1|	-	2.8e-32	111.5	0.0	4.7e-32	110.8	0.0	1.4	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Semialdhyde_dhC	PF02774.13	gi|568164012|ref|YP_008947450.1|	-	1e-26	93.9	0.0	1.5e-26	93.3	0.0	1.3	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
Gp_dh_C	PF02800.15	gi|568164012|ref|YP_008947450.1|	-	0.003	17.0	0.0	0.0065	15.9	0.0	1.7	1	0	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
DapB_N	PF01113.15	gi|568164012|ref|YP_008947450.1|	-	0.013	15.3	0.0	0.027	14.4	0.0	1.6	1	0	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
Ldh_1_N	PF00056.18	gi|568164012|ref|YP_008947450.1|	-	0.026	14.3	0.1	0.059	13.1	0.0	1.6	1	0	0	1	1	1	0	lactate/malate	dehydrogenase,	NAD	binding	domain
DXP_reductoisom	PF02670.11	gi|568164012|ref|YP_008947450.1|	-	0.031	14.8	0.2	0.19	12.2	0.0	2.4	3	0	0	3	3	3	0	1-deoxy-D-xylulose	5-phosphate	reductoisomerase
NAD_binding_10	PF13460.1	gi|568164012|ref|YP_008947450.1|	-	0.059	13.3	0.0	0.13	12.2	0.0	1.6	1	0	0	1	1	1	0	NADH(P)-binding
AA_kinase	PF00696.23	gi|568164013|ref|YP_008947451.1|	-	7.1e-44	150.1	1.4	1.2e-43	149.3	0.1	1.8	2	0	0	2	2	2	1	Amino	acid	kinase	family
ACT	PF01842.20	gi|568164013|ref|YP_008947451.1|	-	2.4e-05	23.7	0.9	0.0087	15.5	0.1	2.8	2	0	0	2	2	2	2	ACT	domain
PALP	PF00291.20	gi|568164014|ref|YP_008947452.1|	-	3.9e-71	239.7	0.2	4.8e-71	239.5	0.2	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
RecR	PF02132.10	gi|568164014|ref|YP_008947452.1|	-	0.051	13.0	0.1	0.18	11.2	0.0	1.9	2	0	0	2	2	2	0	RecR	protein
OrfB_Zn_ribbon	PF07282.6	gi|568164014|ref|YP_008947452.1|	-	0.066	12.8	0.2	0.13	11.9	0.2	1.5	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
Zn-ribbon_8	PF09723.5	gi|568164014|ref|YP_008947452.1|	-	0.1	12.5	0.1	0.22	11.4	0.1	1.5	1	0	0	1	1	1	0	Zinc	ribbon	domain
DNA_RNApol_7kD	PF03604.8	gi|568164014|ref|YP_008947452.1|	-	0.1	12.0	1.7	0.22	11.0	1.1	1.5	1	0	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
HypA	PF01155.14	gi|568164014|ref|YP_008947452.1|	-	0.13	11.9	0.1	0.2	11.3	0.1	1.3	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
Prok-RING_1	PF14446.1	gi|568164014|ref|YP_008947452.1|	-	0.17	11.6	0.5	0.27	10.9	0.3	1.3	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
zf-ribbon_3	PF13248.1	gi|568164014|ref|YP_008947452.1|	-	0.7	9.1	2.2	2.8	7.2	1.5	1.9	1	1	0	1	1	1	0	zinc-ribbon	domain
UbiD	PF01977.11	gi|568164015|ref|YP_008947453.1|	-	4.8e-133	443.5	0.0	5.6e-133	443.3	0.0	1.0	1	0	0	1	1	1	1	3-octaprenyl-4-hydroxybenzoate	carboxy-lyase
HMG-CoA_red	PF00368.13	gi|568164015|ref|YP_008947453.1|	-	0.1	11.2	0.0	0.14	10.7	0.0	1.1	1	0	0	1	1	1	0	Hydroxymethylglutaryl-coenzyme	A	reductase
PIG-S	PF10510.4	gi|568164875|ref|YP_008947454.1|	-	0.013	14.2	0.0	0.015	14.0	0.0	1.0	1	0	0	1	1	1	0	Phosphatidylinositol-glycan	biosynthesis	class	S	protein
Snf7	PF03357.16	gi|568164016|ref|YP_008947455.1|	-	0.00012	21.5	2.3	0.00019	20.8	1.6	1.5	1	1	0	1	1	1	1	Snf7
FHIPEP	PF00771.15	gi|568164016|ref|YP_008947455.1|	-	0.0032	15.8	1.1	0.0037	15.6	0.8	1.1	1	0	0	1	1	1	1	FHIPEP	family
Pox_F11	PF04943.7	gi|568164016|ref|YP_008947455.1|	-	0.019	13.8	0.2	0.02	13.8	0.1	1.2	1	0	0	1	1	1	0	Poxvirus	F11	protein
LOH1CR12	PF10158.4	gi|568164016|ref|YP_008947455.1|	-	0.028	14.2	0.2	0.055	13.2	0.1	1.5	1	0	0	1	1	1	0	Tumour	suppressor	protein
PPDK_N	PF01326.14	gi|568164017|ref|YP_008947456.1|	-	7.9e-103	343.9	0.0	1.4e-102	343.1	0.0	1.3	1	0	0	1	1	1	1	Pyruvate	phosphate	dikinase,	PEP/pyruvate	binding	domain
PEP-utilizers_C	PF02896.13	gi|568164017|ref|YP_008947456.1|	-	9.4e-80	267.6	0.0	1.7e-79	266.7	0.0	1.4	1	0	0	1	1	1	1	PEP-utilising	enzyme,	TIM	barrel	domain
PEP-utilizers	PF00391.18	gi|568164017|ref|YP_008947456.1|	-	4e-29	100.0	0.3	1.1e-28	98.5	0.2	1.9	1	0	0	1	1	1	1	PEP-utilising	enzyme,	mobile	domain
DUF384	PF04064.8	gi|568164017|ref|YP_008947456.1|	-	0.079	12.5	0.0	0.26	10.8	0.0	1.8	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF384)
UPF0147	PF03685.8	gi|568164017|ref|YP_008947456.1|	-	0.38	10.6	4.7	0.094	12.5	0.2	2.3	3	0	0	3	3	3	0	Uncharacterised	protein	family	(UPF0147)
zf-B_box	PF00643.19	gi|568164018|ref|YP_008947457.1|	-	0.0029	17.4	7.5	0.0029	17.4	5.2	4.0	2	1	2	4	4	4	3	B-box	zinc	finger
FYVE	PF01363.16	gi|568164018|ref|YP_008947457.1|	-	0.085	12.7	32.1	39	4.2	9.6	3.8	1	1	1	2	2	2	0	FYVE	zinc	finger
DZR	PF12773.2	gi|568164018|ref|YP_008947457.1|	-	0.32	10.8	27.8	1.3e+03	-0.8	19.3	3.4	1	1	0	1	1	1	0	Double	zinc	ribbon
zf-RING_5	PF14634.1	gi|568164018|ref|YP_008947457.1|	-	1	9.1	27.0	0.22	11.2	6.8	2.8	2	2	0	2	2	2	0	zinc-RING	finger	domain
FYVE_2	PF02318.11	gi|568164018|ref|YP_008947457.1|	-	2.5	8.0	29.0	0.93	9.4	5.1	2.4	1	1	1	2	2	2	0	FYVE-type	zinc	finger
Prok-RING_2	PF14445.1	gi|568164018|ref|YP_008947457.1|	-	3.2	7.7	20.2	0.71	9.8	5.1	2.4	1	1	1	2	2	2	0	Prokaryotic	RING	finger	family	2
NAD_binding_5	PF07994.7	gi|568164019|ref|YP_008947458.1|	-	1.1e-51	176.0	0.0	3.4e-51	174.4	0.0	1.6	1	1	0	1	1	1	1	Myo-inositol-1-phosphate	synthase
Inos-1-P_synth	PF01658.12	gi|568164019|ref|YP_008947458.1|	-	1.6e-29	102.0	0.0	3.2e-29	101.0	0.0	1.5	1	0	0	1	1	1	1	Myo-inositol-1-phosphate	synthase
Acylphosphatase	PF00708.13	gi|568164020|ref|YP_008947459.1|	-	5.2e-28	96.9	0.0	5.6e-28	96.8	0.0	1.0	1	0	0	1	1	1	1	Acylphosphatase
PALP	PF00291.20	gi|568164021|ref|YP_008947460.1|	-	2.1e-35	122.4	0.0	2.8e-35	122.0	0.0	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
Trp_syntA	PF00290.15	gi|568164022|ref|YP_008947461.1|	-	1.5e-37	128.5	0.6	1.8e-37	128.3	0.4	1.0	1	0	0	1	1	1	1	Tryptophan	synthase	alpha	chain
His_biosynth	PF00977.16	gi|568164022|ref|YP_008947461.1|	-	2.1e-05	23.9	1.1	2.9e-05	23.4	0.2	1.6	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
PcrB	PF01884.12	gi|568164022|ref|YP_008947461.1|	-	6.4e-05	22.3	0.9	0.00018	20.8	0.1	2.0	2	0	0	2	2	2	1	PcrB	family
TMP-TENI	PF02581.12	gi|568164022|ref|YP_008947461.1|	-	0.0033	16.5	0.1	0.0081	15.3	0.0	1.6	2	0	0	2	2	2	1	Thiamine	monophosphate	synthase/TENI
FMN_dh	PF01070.13	gi|568164022|ref|YP_008947461.1|	-	0.014	14.2	0.1	0.02	13.7	0.1	1.2	1	0	0	1	1	1	0	FMN-dependent	dehydrogenase
Ribul_P_3_epim	PF00834.14	gi|568164022|ref|YP_008947461.1|	-	0.02	13.9	0.0	0.026	13.6	0.0	1.3	1	0	0	1	1	1	0	Ribulose-phosphate	3	epimerase	family
NMO	PF03060.10	gi|568164022|ref|YP_008947461.1|	-	0.023	13.8	0.1	0.16	11.0	0.1	2.0	1	1	1	2	2	2	0	Nitronate	monooxygenase
ThiG	PF05690.9	gi|568164022|ref|YP_008947461.1|	-	0.052	12.6	0.6	0.095	11.7	0.0	1.7	2	0	0	2	2	2	0	Thiazole	biosynthesis	protein	ThiG
IGPS	PF00218.16	gi|568164022|ref|YP_008947461.1|	-	0.071	12.1	0.1	0.14	11.1	0.1	1.4	1	0	0	1	1	1	0	Indole-3-glycerol	phosphate	synthase
Glycos_transf_3	PF00591.16	gi|568164023|ref|YP_008947462.1|	-	2e-75	253.4	0.0	2.7e-75	253.0	0.0	1.1	1	0	0	1	1	1	1	Glycosyl	transferase	family,	a/b	domain
Glycos_trans_3N	PF02885.12	gi|568164023|ref|YP_008947462.1|	-	1.8e-20	72.2	0.4	3.2e-20	71.4	0.3	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family,	helical	bundle	domain
PRAI	PF00697.17	gi|568164024|ref|YP_008947463.1|	-	1.5e-26	93.1	0.0	1.7e-26	92.9	0.0	1.0	1	0	0	1	1	1	1	N-(5'phosphoribosyl)anthranilate	(PRA)	isomerase
Chorismate_bind	PF00425.13	gi|568164025|ref|YP_008947464.1|	-	6.4e-90	300.9	0.0	7.8e-90	300.6	0.0	1.1	1	0	0	1	1	1	1	chorismate	binding	enzyme
Anth_synt_I_N	PF04715.8	gi|568164025|ref|YP_008947464.1|	-	3e-24	85.6	0.0	7.1e-24	84.4	0.0	1.7	1	0	0	1	1	1	1	Anthranilate	synthase	component	I,	N	terminal	region
GATase	PF00117.23	gi|568164026|ref|YP_008947465.1|	-	1.8e-49	167.8	0.0	2e-49	167.6	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|568164026|ref|YP_008947465.1|	-	4.3e-12	45.9	0.0	5.2e-12	45.6	0.0	1.3	1	0	0	1	1	1	1	Peptidase	C26
SNO	PF01174.14	gi|568164026|ref|YP_008947465.1|	-	0.065	12.8	0.0	0.11	12.1	0.0	1.4	1	0	0	1	1	1	0	SNO	glutamine	amidotransferase	family
Acetyltransf_7	PF13508.1	gi|568164026|ref|YP_008947465.1|	-	0.075	13.2	0.1	0.23	11.6	0.0	1.8	2	0	0	2	2	2	0	Acetyltransferase	(GNAT)	domain
IGPS	PF00218.16	gi|568164027|ref|YP_008947466.1|	-	2.5e-72	243.0	0.4	3.1e-72	242.6	0.3	1.0	1	0	0	1	1	1	1	Indole-3-glycerol	phosphate	synthase
His_biosynth	PF00977.16	gi|568164027|ref|YP_008947466.1|	-	0.00014	21.1	0.5	0.0038	16.5	0.0	2.1	1	1	1	2	2	2	1	Histidine	biosynthesis	protein
FMN_dh	PF01070.13	gi|568164027|ref|YP_008947466.1|	-	0.00037	19.4	0.0	0.19	10.5	0.0	2.1	2	0	0	2	2	2	2	FMN-dependent	dehydrogenase
QRPTase_C	PF01729.14	gi|568164027|ref|YP_008947466.1|	-	0.024	14.1	0.2	0.16	11.4	0.0	2.0	1	1	1	2	2	2	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
ERF	PF04404.7	gi|568164027|ref|YP_008947466.1|	-	0.085	12.3	0.5	5.9	6.3	0.1	2.4	1	1	1	2	2	2	0	ERF	superfamily
Aminotran_1_2	PF00155.16	gi|568164028|ref|YP_008947467.1|	-	6.1e-77	259.0	0.0	6.9e-77	258.8	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
DegT_DnrJ_EryC1	PF01041.12	gi|568164028|ref|YP_008947467.1|	-	5.6e-10	38.7	0.0	1.4e-09	37.4	0.0	1.6	2	0	0	2	2	2	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_5	PF00266.14	gi|568164028|ref|YP_008947467.1|	-	1.1e-06	27.6	0.0	3.2e-06	26.1	0.0	1.7	2	0	0	2	2	2	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.15	gi|568164028|ref|YP_008947467.1|	-	1.2e-05	23.8	0.0	2.1e-05	22.9	0.0	1.3	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Beta_elim_lyase	PF01212.16	gi|568164028|ref|YP_008947467.1|	-	1.3e-05	24.4	0.0	7e-05	22.1	0.0	1.9	2	0	0	2	2	2	1	Beta-eliminating	lyase
Radical_SAM	PF04055.16	gi|568164028|ref|YP_008947467.1|	-	0.0036	17.4	0.0	0.96	9.6	0.0	2.4	2	0	0	2	2	2	2	Radical	SAM	superfamily
OKR_DC_1	PF01276.15	gi|568164028|ref|YP_008947467.1|	-	0.027	13.0	0.0	0.072	11.6	0.0	1.7	2	0	0	2	2	2	0	Orn/Lys/Arg	decarboxylase,	major	domain
tRNA-synt_1	PF00133.17	gi|568164029|ref|YP_008947468.1|	-	6.5e-129	430.6	0.1	4.4e-128	427.9	0.0	2.1	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|568164029|ref|YP_008947468.1|	-	1.5e-30	105.9	2.6	2.9e-30	105.0	1.8	1.5	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.6	gi|568164029|ref|YP_008947468.1|	-	6.1e-27	94.2	0.2	5.9e-11	41.6	0.0	3.5	3	0	0	3	3	3	3	tRNA	synthetases	class	I	(M)
tRNA-synt_1_2	PF13603.1	gi|568164029|ref|YP_008947468.1|	-	5.1e-06	25.9	0.0	0.00013	21.3	0.0	2.7	1	1	2	3	3	3	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1d	PF00750.14	gi|568164029|ref|YP_008947468.1|	-	0.00042	19.2	0.0	0.08	11.7	0.0	2.8	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(R)
tRNA-synt_1e	PF01406.14	gi|568164029|ref|YP_008947468.1|	-	0.016	14.3	0.0	0.9	8.5	0.0	2.7	3	0	0	3	3	3	0	tRNA	synthetases	class	I	(C)	catalytic	domain
NAD_binding_8	PF13450.1	gi|568164030|ref|YP_008947469.1|	-	0.001	19.0	0.0	0.002	18.0	0.0	1.5	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Trp_halogenase	PF04820.9	gi|568164030|ref|YP_008947469.1|	-	0.025	13.2	0.0	0.28	9.7	0.0	2.0	2	0	0	2	2	2	0	Tryptophan	halogenase
TraT	PF05818.7	gi|568164876|ref|YP_008947471.1|	-	0.048	13.0	0.1	2.3	7.5	0.0	2.0	2	0	0	2	2	2	0	Enterobacterial	TraT	complement	resistance	protein
Viral_cys_rich	PF08008.7	gi|568164877|ref|YP_008947472.1|	-	0.16	11.5	1.0	0.57	9.7	0.0	2.0	2	0	0	2	2	2	0	Viral	cysteine	rich
zf-H2C2_2	PF13465.1	gi|568164032|ref|YP_008947473.1|	-	0.00024	21.2	6.6	0.17	12.2	0.2	3.2	3	0	0	3	3	3	1	Zinc-finger	double	domain
Prok-RING_1	PF14446.1	gi|568164032|ref|YP_008947473.1|	-	0.00085	18.9	4.5	0.019	14.6	0.8	2.2	2	0	0	2	2	2	1	Prokaryotic	RING	finger	family	1
DZR	PF12773.2	gi|568164032|ref|YP_008947473.1|	-	0.0012	18.6	7.1	0.055	13.2	3.7	2.1	1	1	1	2	2	2	2	Double	zinc	ribbon
zf-RING_3	PF14369.1	gi|568164032|ref|YP_008947473.1|	-	0.0026	17.7	3.7	0.15	12.0	0.5	2.3	2	0	0	2	2	2	1	zinc-finger
Zn-ribbon_8	PF09723.5	gi|568164032|ref|YP_008947473.1|	-	0.0044	16.9	3.7	0.0044	16.9	2.5	1.8	2	0	0	2	2	1	1	Zinc	ribbon	domain
zf-tcix	PF14952.1	gi|568164032|ref|YP_008947473.1|	-	0.0053	16.0	4.6	0.034	13.4	0.1	2.4	2	0	0	2	2	2	1	Putative	treble-clef,	zinc-finger,	Zn-binding
zinc_ribbon_2	PF13240.1	gi|568164032|ref|YP_008947473.1|	-	0.009	15.4	12.0	0.042	13.3	0.3	3.2	3	0	0	3	3	3	1	zinc-ribbon	domain
Rep_fac-A_C	PF08646.5	gi|568164032|ref|YP_008947473.1|	-	0.013	15.1	2.5	0.018	14.7	1.7	1.2	1	0	0	1	1	1	0	Replication	factor-A	C	terminal	domain
zf-ribbon_3	PF13248.1	gi|568164032|ref|YP_008947473.1|	-	0.014	14.6	12.3	0.14	11.4	6.4	3.0	2	1	0	2	2	2	0	zinc-ribbon	domain
zf-C4_Topoisom	PF01396.14	gi|568164032|ref|YP_008947473.1|	-	0.016	14.6	5.4	0.5	9.9	0.1	2.8	3	0	0	3	3	3	0	Topoisomerase	DNA	binding	C4	zinc	finger
zf-C3HC4_3	PF13920.1	gi|568164032|ref|YP_008947473.1|	-	0.019	14.5	9.7	0.38	10.4	0.2	2.6	1	1	1	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
DUF1272	PF06906.6	gi|568164032|ref|YP_008947473.1|	-	0.027	14.3	7.1	0.13	12.1	4.9	2.1	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1272)
C1_3	PF07649.7	gi|568164032|ref|YP_008947473.1|	-	0.034	14.1	1.7	0.034	14.1	1.2	2.4	3	0	0	3	3	2	0	C1-like	domain
DNA_ligase_ZBD	PF03119.11	gi|568164032|ref|YP_008947473.1|	-	0.038	13.7	3.3	0.16	11.7	0.1	2.7	3	0	0	3	3	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zf-C2H2_4	PF13894.1	gi|568164032|ref|YP_008947473.1|	-	0.061	13.6	9.3	3.3	8.2	1.1	3.2	3	0	0	3	3	3	0	C2H2-type	zinc	finger
HypA	PF01155.14	gi|568164032|ref|YP_008947473.1|	-	0.066	12.9	4.9	0.95	9.1	3.4	2.0	1	1	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zf-TFIIB	PF13453.1	gi|568164032|ref|YP_008947473.1|	-	0.13	11.4	1.8	8.7	5.6	0.0	2.4	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
zf-CHCC	PF10276.4	gi|568164032|ref|YP_008947473.1|	-	0.17	11.7	0.5	0.17	11.7	0.3	2.3	2	0	0	2	2	2	0	Zinc-finger	domain
UPF0547	PF10571.4	gi|568164032|ref|YP_008947473.1|	-	0.2	11.4	0.1	0.2	11.4	0.1	2.9	3	0	0	3	3	3	0	Uncharacterised	protein	family	UPF0547
OrfB_Zn_ribbon	PF07282.6	gi|568164032|ref|YP_008947473.1|	-	0.2	11.3	6.1	0.49	10.0	1.0	2.1	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
Cys_rich_CPXG	PF14255.1	gi|568164032|ref|YP_008947473.1|	-	0.21	11.4	5.0	1.6	8.5	0.1	3.0	3	0	0	3	3	3	0	Cysteine-rich	CPXCG
zf-C3HC4_2	PF13923.1	gi|568164032|ref|YP_008947473.1|	-	0.25	11.4	6.6	1.9	8.5	0.8	2.3	2	0	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
zinc_ribbon_4	PF13717.1	gi|568164032|ref|YP_008947473.1|	-	0.25	11.0	11.2	0.43	10.3	5.1	2.6	2	1	0	2	2	2	0	zinc-ribbon	domain
zf-RING_2	PF13639.1	gi|568164032|ref|YP_008947473.1|	-	0.31	10.8	4.7	0.61	9.9	3.3	1.5	1	1	0	1	1	1	0	Ring	finger	domain
zf-B_box	PF00643.19	gi|568164032|ref|YP_008947473.1|	-	0.36	10.7	9.4	2	8.3	4.3	2.7	2	1	0	2	2	2	0	B-box	zinc	finger
zinc_ribbon_5	PF13719.1	gi|568164032|ref|YP_008947473.1|	-	0.4	10.2	11.0	0.7	9.5	5.0	2.6	2	1	0	2	2	2	0	zinc-ribbon	domain
TerY-C	PF15616.1	gi|568164032|ref|YP_008947473.1|	-	0.41	10.5	6.6	4.4	7.2	0.6	2.6	1	1	2	3	3	3	0	TerY-C	metal	binding	domain
zf-RING_4	PF14570.1	gi|568164032|ref|YP_008947473.1|	-	0.42	10.2	9.6	0.48	10.0	2.3	2.2	2	0	0	2	2	2	0	RING/Ubox	like	zinc-binding	domain
zf-AN1	PF01428.11	gi|568164032|ref|YP_008947473.1|	-	0.57	10.1	8.5	1.6	8.7	1.4	2.6	1	1	2	3	3	3	0	AN1-like	Zinc	finger
zf-Di19	PF05605.7	gi|568164032|ref|YP_008947473.1|	-	0.57	10.3	8.7	2.6	8.2	0.1	3.1	2	1	1	3	3	3	0	Drought	induced	19	protein	(Di19),	zinc-binding
zf-C2HC5	PF06221.8	gi|568164032|ref|YP_008947473.1|	-	0.72	9.6	6.8	0.57	9.9	2.2	2.2	1	1	1	2	2	2	0	Putative	zinc	finger	motif,	C2HC5-type
PhnA_Zn_Ribbon	PF08274.7	gi|568164032|ref|YP_008947473.1|	-	0.77	9.5	3.7	7.4	6.4	0.5	2.4	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
zf-LITAF-like	PF10601.4	gi|568164032|ref|YP_008947473.1|	-	0.77	9.6	8.2	5.4	6.9	0.1	3.0	1	1	2	3	3	3	0	LITAF-like	zinc	ribbon	domain
ADK_lid	PF05191.9	gi|568164032|ref|YP_008947473.1|	-	0.78	9.4	7.2	0.13	11.9	2.0	2.0	2	1	0	2	2	1	0	Adenylate	kinase,	active	site	lid
Sgf11	PF08209.6	gi|568164032|ref|YP_008947473.1|	-	0.78	9.1	8.5	4	6.8	0.5	3.1	3	0	0	3	3	3	0	Sgf11	(transcriptional	regulation	protein)
zf-IS66	PF13005.2	gi|568164032|ref|YP_008947473.1|	-	0.8	9.7	6.9	2.2	8.3	0.1	2.5	3	0	0	3	3	2	0	zinc-finger	binding	domain	of	transposase	IS66
Nop10p	PF04135.7	gi|568164032|ref|YP_008947473.1|	-	0.83	9.4	4.1	2	8.2	1.6	2.2	1	1	1	2	2	2	0	Nucleolar	RNA-binding	protein,	Nop10p	family
CpXC	PF14353.1	gi|568164032|ref|YP_008947473.1|	-	0.92	9.4	8.3	2.6	8.0	2.3	2.6	1	1	1	2	2	2	0	CpXC	protein
C1_2	PF03107.11	gi|568164032|ref|YP_008947473.1|	-	0.94	9.6	8.1	0.28	11.3	2.6	2.3	2	1	0	2	2	2	0	C1	domain
Lar_restr_allev	PF14354.1	gi|568164032|ref|YP_008947473.1|	-	1	9.6	9.6	3	8.1	4.0	2.3	1	1	1	2	2	2	0	Restriction	alleviation	protein	Lar
zf-C2H2	PF00096.21	gi|568164032|ref|YP_008947473.1|	-	1.1	9.7	12.3	2.6	8.5	1.1	3.2	3	0	0	3	3	3	0	Zinc	finger,	C2H2	type
zf-UBR	PF02207.15	gi|568164032|ref|YP_008947473.1|	-	1.1	8.9	6.7	0.73	9.5	3.4	1.7	1	1	0	1	1	1	0	Putative	zinc	finger	in	N-recognin	(UBR	box)
zf-RING_5	PF14634.1	gi|568164032|ref|YP_008947473.1|	-	1.2	8.9	11.2	3.3e+02	1.0	7.8	2.8	1	1	0	1	1	1	0	zinc-RING	finger	domain
DUF329	PF03884.9	gi|568164032|ref|YP_008947473.1|	-	1.2	8.7	9.1	8.5	6.0	0.8	3.0	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF329)
zf-MYND	PF01753.13	gi|568164032|ref|YP_008947473.1|	-	1.3	8.9	7.5	14	5.6	5.2	2.1	1	1	0	1	1	1	0	MYND	finger
Integrase_Zn	PF02022.14	gi|568164032|ref|YP_008947473.1|	-	1.4	8.4	3.6	4.3	6.8	0.0	2.6	3	0	0	3	3	2	0	Integrase	Zinc	binding	domain
C1_1	PF00130.17	gi|568164032|ref|YP_008947473.1|	-	1.5	8.6	6.7	1.1	9.0	1.4	2.1	1	1	1	2	2	2	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
zf-CHY	PF05495.7	gi|568164032|ref|YP_008947473.1|	-	1.5	9.0	7.8	0.49	10.5	1.2	2.2	1	1	1	2	2	2	0	CHY	zinc	finger
DUF4379	PF14311.1	gi|568164032|ref|YP_008947473.1|	-	2	8.2	6.1	1.3	8.9	3.1	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4379)
TFIIS_C	PF01096.13	gi|568164032|ref|YP_008947473.1|	-	2.2	7.9	9.3	1	9.0	0.4	2.7	3	0	0	3	3	3	0	Transcription	factor	S-II	(TFIIS)
zf-ISL3	PF14690.1	gi|568164032|ref|YP_008947473.1|	-	2.4	8.2	7.8	12	6.0	0.1	3.0	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
FYVE	PF01363.16	gi|568164032|ref|YP_008947473.1|	-	2.6	7.9	7.5	0.63	9.9	1.2	2.1	1	1	1	2	2	2	0	FYVE	zinc	finger
DUF581	PF04570.9	gi|568164032|ref|YP_008947473.1|	-	3.4	7.0	7.5	3.2	7.0	2.5	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF581)
TF_Zn_Ribbon	PF08271.7	gi|568164032|ref|YP_008947473.1|	-	3.4	7.0	10.7	2.8	7.3	0.2	2.8	3	0	0	3	3	3	0	TFIIB	zinc-binding
DUF4428	PF14471.1	gi|568164032|ref|YP_008947473.1|	-	3.7	7.3	7.4	1.9	8.2	2.2	2.4	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4428)
zf-BED	PF02892.10	gi|568164032|ref|YP_008947473.1|	-	3.9	7.3	14.6	1.9	8.2	0.5	3.1	1	1	2	3	3	3	0	BED	zinc	finger
Ribosomal_S27e	PF01667.12	gi|568164032|ref|YP_008947473.1|	-	4.3	6.9	8.4	31	4.2	3.7	2.8	2	1	0	2	2	2	0	Ribosomal	protein	S27
Ogr_Delta	PF04606.7	gi|568164032|ref|YP_008947473.1|	-	4.3	7.0	6.8	29	4.3	0.1	3.2	3	0	0	3	3	3	0	Ogr/Delta-like	zinc	finger
zf-C3HC4	PF00097.20	gi|568164032|ref|YP_008947473.1|	-	4.6	6.9	7.7	3.8	7.2	1.7	2.3	2	0	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
Mu-like_Com	PF10122.4	gi|568164032|ref|YP_008947473.1|	-	5.9	6.0	10.5	4.7	6.3	0.3	2.3	1	1	1	2	2	2	0	Mu-like	prophage	protein	Com
DUF2072	PF09845.4	gi|568164032|ref|YP_008947473.1|	-	6.5	6.6	7.7	6.6	6.6	1.8	1.9	1	1	1	2	2	2	0	Zn-ribbon	containing	protein	(DUF2072)
Zn_Tnp_IS1595	PF12760.2	gi|568164032|ref|YP_008947473.1|	-	6.6	6.6	10.5	15	5.4	0.3	2.5	1	1	2	3	3	3	0	Transposase	zinc-ribbon	domain
zf-C2HC_2	PF13913.1	gi|568164032|ref|YP_008947473.1|	-	7.7	6.3	17.3	6.1	6.6	0.6	3.2	3	0	0	3	3	3	0	zinc-finger	of	a	C2HC-type
zf-HIT	PF04438.11	gi|568164032|ref|YP_008947473.1|	-	8.7	6.0	16.7	41	3.9	0.2	3.0	2	1	0	2	2	2	0	HIT	zinc	finger
zf-Mss51	PF13824.1	gi|568164032|ref|YP_008947473.1|	-	8.8	6.2	6.3	4e+02	0.9	4.9	2.7	2	1	0	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
DUF1953	PF09196.5	gi|568164033|ref|YP_008947474.1|	-	7.7e-37	124.8	1.4	2.8e-36	123.0	1.0	2.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1953)
Alpha-amylase	PF00128.19	gi|568164033|ref|YP_008947474.1|	-	9.6e-25	87.6	8.6	6.3e-22	78.3	1.3	3.3	2	1	0	2	2	2	2	Alpha	amylase,	catalytic	domain
GIY-YIG	PF01541.19	gi|568164033|ref|YP_008947474.1|	-	0.0027	18.0	3.2	0.013	15.8	2.2	2.1	1	0	0	1	1	1	1	GIY-YIG	catalytic	domain
Alpha-amylase	PF00128.19	gi|568164034|ref|YP_008947475.1|	-	5.8e-21	75.2	0.0	2.5e-19	69.8	0.0	2.7	1	1	0	1	1	1	1	Alpha	amylase,	catalytic	domain
CBM_48	PF02922.13	gi|568164034|ref|YP_008947475.1|	-	6e-20	71.0	0.0	2.1e-19	69.3	0.0	2.0	2	0	0	2	2	2	1	Carbohydrate-binding	module	48	(Isoamylase	N-terminal	domain)
Alpha-amylase	PF00128.19	gi|568164035|ref|YP_008947476.1|	-	3.3e-37	128.5	2.0	1.6e-24	86.8	0.1	2.9	1	1	0	2	2	2	2	Alpha	amylase,	catalytic	domain
Alpha-amyl_C	PF09071.5	gi|568164035|ref|YP_008947476.1|	-	4.6e-23	80.7	0.3	9.7e-23	79.7	0.2	1.6	1	0	0	1	1	1	1	Alpha-amylase,	C	terminal
CBM_48	PF02922.13	gi|568164035|ref|YP_008947476.1|	-	1.2e-06	28.4	0.0	2.4e-06	27.4	0.0	1.5	1	0	0	1	1	1	1	Carbohydrate-binding	module	48	(Isoamylase	N-terminal	domain)
PmbA_TldD	PF01523.11	gi|568164878|ref|YP_008947477.1|	-	0.00096	18.5	0.5	0.0011	18.2	0.3	1.2	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
DUF4446	PF14584.1	gi|568164878|ref|YP_008947477.1|	-	0.064	13.0	0.4	0.089	12.6	0.2	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4446)
ATP-cone	PF03477.11	gi|568164878|ref|YP_008947477.1|	-	0.065	13.6	1.8	0.088	13.2	1.2	1.2	1	0	0	1	1	1	0	ATP	cone	domain
Phage_connect_1	PF05135.8	gi|568164878|ref|YP_008947477.1|	-	0.089	12.9	0.2	0.089	12.9	0.2	1.9	1	1	1	2	2	2	0	Phage	gp6-like	head-tail	connector	protein
CaM_binding	PF07839.6	gi|568164878|ref|YP_008947477.1|	-	0.11	12.6	3.0	0.2	11.8	2.1	1.5	1	1	0	1	1	1	0	Plant	calmodulin-binding	domain
SPOB_ab	PF14682.1	gi|568164878|ref|YP_008947477.1|	-	0.14	11.9	1.9	0.27	11.0	0.5	1.9	1	1	1	2	2	2	0	Sporulation	initiation	phospho-transferase	B,	C-terminal
ZapA	PF05164.8	gi|568164878|ref|YP_008947477.1|	-	0.25	11.3	2.7	1.2	9.1	1.6	2.2	1	1	1	2	2	2	0	Cell	division	protein	ZapA
DUF4504	PF14953.1	gi|568164878|ref|YP_008947477.1|	-	0.26	10.5	2.8	2.9	7.0	0.5	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4504)
Prominin	PF05478.6	gi|568164878|ref|YP_008947477.1|	-	0.3	8.5	3.3	0.33	8.4	2.3	1.0	1	0	0	1	1	1	0	Prominin
Vps51	PF08700.6	gi|568164878|ref|YP_008947477.1|	-	0.48	10.3	5.9	0.38	10.6	1.4	2.2	1	1	1	2	2	2	0	Vps51/Vps67
IZUMO	PF15005.1	gi|568164878|ref|YP_008947477.1|	-	0.5	10.4	2.8	0.67	9.9	1.9	1.2	1	0	0	1	1	1	0	Izumo	sperm-egg	fusion
TSC22	PF01166.13	gi|568164878|ref|YP_008947477.1|	-	1.2	9.2	12.2	0.26	11.2	0.6	3.0	1	1	2	3	3	3	0	TSC-22/dip/bun	family
IncA	PF04156.9	gi|568164878|ref|YP_008947477.1|	-	1.2	8.6	8.0	1.4	8.4	5.5	1.1	1	0	0	1	1	1	0	IncA	protein
DUF1635	PF07795.6	gi|568164878|ref|YP_008947477.1|	-	6.3	6.1	8.5	4.3	6.6	4.4	1.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1635)
DUF434	PF04256.7	gi|568164036|ref|YP_008947478.1|	-	2.3e-25	87.7	2.5	4.1e-25	86.9	1.7	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF434)
tRNA-synt_2c	PF01411.14	gi|568164037|ref|YP_008947479.1|	-	2.6e-115	385.8	0.0	3.6e-115	385.3	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(A)
tRNA_SAD	PF07973.9	gi|568164037|ref|YP_008947479.1|	-	1.5e-11	43.9	0.9	3.6e-11	42.7	0.6	1.7	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
DHHA1	PF02272.14	gi|568164037|ref|YP_008947479.1|	-	0.0043	16.7	0.3	0.012	15.2	0.2	1.8	1	0	0	1	1	1	1	DHHA1	domain
Ribosomal_60s	PF00428.14	gi|568164038|ref|YP_008947480.1|	-	6.4e-20	71.3	10.1	7.5e-20	71.1	7.0	1.1	1	0	0	1	1	1	1	60s	Acidic	ribosomal	protein
PepSY_2	PF13670.1	gi|568164038|ref|YP_008947480.1|	-	0.0046	16.8	1.5	1.3	8.9	0.0	2.2	2	0	0	2	2	2	2	Peptidase	propeptide	and	YPEB	domain
Ribosomal_L10	PF00466.15	gi|568164039|ref|YP_008947481.1|	-	1.6e-26	92.1	0.6	3.7e-26	90.9	0.4	1.6	1	0	0	1	1	1	1	Ribosomal	protein	L10
Ribosomal_60s	PF00428.14	gi|568164039|ref|YP_008947481.1|	-	1.1	9.7	11.0	3.4	8.1	7.6	2.1	1	1	0	1	1	1	0	60s	Acidic	ribosomal	protein
Ribosomal_L1	PF00687.16	gi|568164040|ref|YP_008947482.1|	-	7.9e-40	136.5	2.4	9.5e-40	136.2	1.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L1p/L10e	family
DUF3670	PF12419.3	gi|568164040|ref|YP_008947482.1|	-	0.07	12.5	0.0	0.17	11.3	0.0	1.5	1	0	0	1	1	1	0	SNF2	Helicase	protein
Ribosomal_L11_N	PF03946.9	gi|568164041|ref|YP_008947483.1|	-	1.5e-22	78.7	0.9	3.1e-22	77.7	0.7	1.6	1	0	0	1	1	1	1	Ribosomal	protein	L11,	N-terminal	domain
Ribosomal_L11	PF00298.14	gi|568164041|ref|YP_008947483.1|	-	2.2e-21	75.7	1.2	2.2e-21	75.7	0.8	2.0	3	0	0	3	3	3	1	Ribosomal	protein	L11,	RNA	binding	domain
Flagellin_IN	PF07196.8	gi|568164041|ref|YP_008947483.1|	-	0.072	13.0	1.3	6.4	6.8	0.0	2.8	3	0	0	3	3	3	0	Flagellin	hook	IN	motif
Spt5-NGN	PF03439.8	gi|568164042|ref|YP_008947484.1|	-	6.2e-22	77.1	0.8	6.5e-21	73.8	0.1	2.0	2	0	0	2	2	2	1	Early	transcription	elongation	factor	of	RNA	pol	II,	NGN	section
KOW	PF00467.24	gi|568164042|ref|YP_008947484.1|	-	4.8e-07	29.2	0.1	1.2e-06	27.9	0.0	1.7	1	0	0	1	1	1	1	KOW	motif
NusG	PF02357.14	gi|568164042|ref|YP_008947484.1|	-	0.0001	22.4	1.8	0.0007	19.7	0.0	2.3	2	1	0	2	2	2	1	Transcription	termination	factor	nusG
PalH	PF08733.5	gi|568164043|ref|YP_008947485.1|	-	0.0019	17.1	0.0	0.0022	16.9	0.0	1.0	1	0	0	1	1	1	1	PalH/RIM21
P4Ha_N	PF08336.6	gi|568164043|ref|YP_008947485.1|	-	0.072	12.9	0.0	0.093	12.5	0.0	1.1	1	0	0	1	1	1	0	Prolyl	4-Hydroxylase	alpha-subunit,	N-terminal	region
Lambda_CIII	PF02061.11	gi|568164043|ref|YP_008947485.1|	-	0.072	13.0	0.9	0.15	12.0	0.2	1.7	2	0	0	2	2	2	0	Lambda	Phage	CIII
SRP54	PF00448.17	gi|568164044|ref|YP_008947486.1|	-	5.1e-73	244.6	0.0	5.1e-73	244.6	0.0	2.0	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
SRP54_N	PF02881.14	gi|568164044|ref|YP_008947486.1|	-	1.3e-10	41.2	5.1	1.3e-10	41.2	3.6	3.1	2	1	0	2	2	2	1	SRP54-type	protein,	helical	bundle	domain
cobW	PF02492.14	gi|568164044|ref|YP_008947486.1|	-	1.2e-06	28.1	0.1	2.7e-06	26.9	0.1	1.5	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_22	PF13401.1	gi|568164044|ref|YP_008947486.1|	-	5.7e-05	23.2	0.9	0.00019	21.5	0.0	2.2	1	1	0	2	2	2	1	AAA	domain
MobB	PF03205.9	gi|568164044|ref|YP_008947486.1|	-	9.8e-05	22.0	1.9	0.00019	21.1	0.1	2.4	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_30	PF13604.1	gi|568164044|ref|YP_008947486.1|	-	0.00012	21.6	0.0	0.00025	20.7	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
ArgK	PF03308.11	gi|568164044|ref|YP_008947486.1|	-	0.00026	19.8	0.3	0.0094	14.7	0.2	2.5	1	1	0	1	1	1	1	ArgK	protein
AAA	PF00004.24	gi|568164044|ref|YP_008947486.1|	-	0.00031	20.9	0.9	0.0013	18.9	0.1	2.4	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_33	PF13671.1	gi|568164044|ref|YP_008947486.1|	-	0.001	18.9	2.1	0.0062	16.4	0.0	2.7	2	1	0	2	2	2	1	AAA	domain
NB-ARC	PF00931.17	gi|568164044|ref|YP_008947486.1|	-	0.0011	17.9	0.1	0.0011	17.9	0.1	2.3	2	0	0	2	2	2	1	NB-ARC	domain
NTPase_1	PF03266.10	gi|568164044|ref|YP_008947486.1|	-	0.0014	18.4	7.6	0.03	14.0	0.3	3.4	2	1	1	3	3	3	1	NTPase
DUF258	PF03193.11	gi|568164044|ref|YP_008947486.1|	-	0.014	14.5	0.1	0.035	13.2	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_16	PF13191.1	gi|568164044|ref|YP_008947486.1|	-	0.018	15.0	1.7	0.047	13.6	0.1	2.2	2	1	0	2	2	2	0	AAA	ATPase	domain
APS_kinase	PF01583.15	gi|568164044|ref|YP_008947486.1|	-	0.018	14.7	0.0	0.042	13.5	0.0	1.6	1	0	0	1	1	1	0	Adenylylsulphate	kinase
AAA_14	PF13173.1	gi|568164044|ref|YP_008947486.1|	-	0.028	14.3	1.3	0.044	13.6	0.0	2.0	2	1	0	2	2	2	0	AAA	domain
T2SE	PF00437.15	gi|568164044|ref|YP_008947486.1|	-	0.031	13.1	2.2	0.037	12.9	0.7	1.6	1	1	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_19	PF13245.1	gi|568164044|ref|YP_008947486.1|	-	0.035	13.8	0.0	0.085	12.6	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
Miro	PF08477.8	gi|568164044|ref|YP_008947486.1|	-	0.043	14.3	5.5	0.71	10.3	0.1	2.7	2	1	0	2	2	2	0	Miro-like	protein
AAA_28	PF13521.1	gi|568164044|ref|YP_008947486.1|	-	0.044	13.7	0.7	0.72	9.8	0.0	2.6	2	0	0	2	2	2	0	AAA	domain
KTI12	PF08433.5	gi|568164044|ref|YP_008947486.1|	-	0.059	12.5	0.0	0.059	12.5	0.0	2.6	2	1	0	2	2	2	0	Chromatin	associated	protein	KTI12
DUF3597	PF12200.3	gi|568164044|ref|YP_008947486.1|	-	0.14	12.5	2.2	0.46	10.8	1.5	1.8	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3597)
AAA_17	PF13207.1	gi|568164044|ref|YP_008947486.1|	-	0.24	12.1	5.5	0.36	11.6	0.4	3.0	2	2	0	2	2	2	0	AAA	domain
Viral_helicase1	PF01443.13	gi|568164044|ref|YP_008947486.1|	-	0.26	10.7	0.0	0.26	10.7	0.0	2.2	2	1	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
TEX19	PF15553.1	gi|568164044|ref|YP_008947486.1|	-	0.36	10.6	2.7	0.57	10.0	1.9	1.3	1	0	0	1	1	1	0	Testis-expressed	protein	19
DUF3573	PF12097.3	gi|568164044|ref|YP_008947486.1|	-	5.3	5.5	10.0	8	4.9	7.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3573)
Prefoldin	PF02996.12	gi|568164045|ref|YP_008947487.1|	-	1.5e-26	92.4	4.3	1.5e-26	92.4	3.0	1.4	1	1	0	1	1	1	1	Prefoldin	subunit
NPV_P10	PF05531.7	gi|568164045|ref|YP_008947487.1|	-	0.015	15.5	2.0	0.67	10.2	0.1	2.3	2	1	0	2	2	2	0	Nucleopolyhedrovirus	P10	protein
Sec8_exocyst	PF04048.9	gi|568164045|ref|YP_008947487.1|	-	0.024	14.2	1.1	0.11	12.1	0.1	2.0	2	0	0	2	2	2	0	Sec8	exocyst	complex	component	specific	domain
ChuX_HutX	PF06228.8	gi|568164045|ref|YP_008947487.1|	-	0.071	12.4	0.1	3.4	7.0	0.0	2.3	2	1	0	2	2	2	0	Haem	utilisation	ChuX/HutX
DUF4164	PF13747.1	gi|568164045|ref|YP_008947487.1|	-	0.1	12.7	1.9	2.4	8.3	0.2	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4164)
HHH_6	PF14579.1	gi|568164045|ref|YP_008947487.1|	-	0.1	12.6	0.1	0.35	10.9	0.0	2.0	1	1	0	1	1	1	0	Helix-hairpin-helix	motif
CENP-Q	PF13094.1	gi|568164045|ref|YP_008947487.1|	-	0.11	12.5	5.2	0.27	11.2	3.6	1.7	1	1	0	1	1	1	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
Tub_2	PF04525.7	gi|568164045|ref|YP_008947487.1|	-	0.13	11.6	0.4	1.4	8.3	0.1	2.1	2	0	0	2	2	2	0	Tubby	C	2
DUF3508	PF12018.3	gi|568164045|ref|YP_008947487.1|	-	0.23	10.4	2.0	0.57	9.1	0.2	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3508)
DUF148	PF02520.12	gi|568164045|ref|YP_008947487.1|	-	0.54	10.0	6.1	6.2	6.6	0.7	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF148
Prefoldin_2	PF01920.15	gi|568164045|ref|YP_008947487.1|	-	0.6	9.9	6.3	2.1	8.1	0.4	2.3	2	0	0	2	2	2	0	Prefoldin	subunit
Microtub_assoc	PF07989.6	gi|568164045|ref|YP_008947487.1|	-	0.65	9.8	2.8	0.82	9.5	0.2	2.3	2	1	0	2	2	2	0	Microtubule	associated
CorA	PF01544.13	gi|568164045|ref|YP_008947487.1|	-	0.78	8.7	5.6	1	8.2	0.6	2.0	1	1	1	2	2	2	0	CorA-like	Mg2+	transporter	protein
Plasmid_stabil	PF05016.9	gi|568164045|ref|YP_008947487.1|	-	0.88	10.0	3.1	4.4	7.7	0.3	2.2	1	1	0	2	2	2	0	Plasmid	stabilisation	system	protein
Occludin_ELL	PF07303.8	gi|568164045|ref|YP_008947487.1|	-	0.97	10.1	4.8	7	7.4	0.5	2.1	2	0	0	2	2	2	0	Occludin	homology	domain
Nsp1_C	PF05064.8	gi|568164045|ref|YP_008947487.1|	-	1.1	8.9	7.0	5.8	6.6	0.3	2.2	2	0	0	2	2	2	0	Nsp1-like	C-terminal	region
SlyX	PF04102.7	gi|568164045|ref|YP_008947487.1|	-	2.3	8.6	4.8	0.76	10.1	0.6	2.1	2	1	0	2	2	2	0	SlyX
Ribosomal_L18ae	PF01775.12	gi|568164046|ref|YP_008947488.1|	-	1e-10	41.5	1.0	1.7e-10	40.8	0.7	1.4	1	1	0	1	1	1	1	Ribosomal	L18ae/LX	protein	domain
Egg_lysin	PF01303.12	gi|568164046|ref|YP_008947488.1|	-	0.085	12.8	0.1	0.11	12.5	0.1	1.1	1	0	0	1	1	1	0	Egg	lysin	(Sperm-lysin)
IL31	PF15209.1	gi|568164046|ref|YP_008947488.1|	-	0.15	11.6	1.0	1.2	8.7	0.3	1.9	1	1	1	2	2	2	0	Interleukin	31
eIF-6	PF01912.13	gi|568164047|ref|YP_008947489.1|	-	1.2e-66	223.6	9.5	1.5e-66	223.2	6.6	1.1	1	0	0	1	1	1	1	eIF-6	family
PNK3P	PF08645.6	gi|568164047|ref|YP_008947489.1|	-	0.23	10.8	2.0	0.21	11.0	0.3	1.7	2	0	0	2	2	2	0	Polynucleotide	kinase	3	phosphatase
Ribosomal_L31e	PF01198.14	gi|568164048|ref|YP_008947490.1|	-	5.1e-11	42.0	3.4	9.4e-11	41.2	2.4	1.4	1	0	0	1	1	1	1	Ribosomal	protein	L31e
DTHCT	PF08070.6	gi|568164048|ref|YP_008947490.1|	-	0.024	15.2	5.8	0.034	14.7	4.0	1.2	1	0	0	1	1	1	0	DTHCT	(NUC029)	region
ST7	PF04184.7	gi|568164048|ref|YP_008947490.1|	-	0.056	11.6	2.3	0.067	11.4	1.6	1.0	1	0	0	1	1	1	0	ST7	protein
ACCA	PF03255.9	gi|568164048|ref|YP_008947490.1|	-	0.085	12.4	4.1	0.12	11.9	2.9	1.2	1	0	0	1	1	1	0	Acetyl	co-enzyme	A	carboxylase	carboxyltransferase	alpha	subunit
HGTP_anticodon2	PF12745.2	gi|568164048|ref|YP_008947490.1|	-	0.23	10.5	7.2	0.27	10.3	5.0	1.0	1	0	0	1	1	1	0	Anticodon	binding	domain	of	tRNAs
PTPlike_phytase	PF14566.1	gi|568164048|ref|YP_008947490.1|	-	0.31	11.0	3.4	0.38	10.7	2.4	1.2	1	0	0	1	1	1	0	Inositol	hexakisphosphate
Peptidase_S49_N	PF08496.5	gi|568164048|ref|YP_008947490.1|	-	0.41	10.4	6.9	0.52	10.0	4.8	1.2	1	0	0	1	1	1	0	Peptidase	family	S49	N-terminal
GAGA_bind	PF06217.7	gi|568164048|ref|YP_008947490.1|	-	0.64	9.9	8.0	0.8	9.6	5.5	1.1	1	0	0	1	1	1	0	GAGA	binding	protein-like	family
AIF_C	PF14721.1	gi|568164048|ref|YP_008947490.1|	-	6	7.1	6.2	8.6	6.6	4.3	1.3	1	0	0	1	1	1	0	Apoptosis-inducing	factor,	mitochondrion-associated,	C-term
RR_TM4-6	PF06459.7	gi|568164048|ref|YP_008947490.1|	-	8.3	6.2	10.2	9.5	6.0	7.1	1.1	1	0	0	1	1	1	0	Ryanodine	Receptor	TM	4-6
Ribosomal_L39	PF00832.15	gi|568164049|ref|YP_008947491.1|	-	2.7e-21	74.7	6.7	3.1e-21	74.5	4.7	1.1	1	0	0	1	1	1	1	Ribosomal	L39	protein
REV	PF00424.13	gi|568164049|ref|YP_008947491.1|	-	0.13	12.1	1.0	0.14	12.1	0.7	1.1	1	0	0	1	1	1	0	REV	protein	(anti-repression	trans-activator	protein)
dsDNA_bind	PF01984.15	gi|568164050|ref|YP_008947492.1|	-	1.3e-30	105.5	15.7	1.6e-30	105.2	10.9	1.1	1	0	0	1	1	1	1	Double-stranded	DNA-binding	domain
4HB_MCP_1	PF12729.2	gi|568164050|ref|YP_008947492.1|	-	0.016	14.5	8.1	0.019	14.3	5.6	1.1	1	0	0	1	1	1	0	Four	helix	bundle	sensory	module	for	signal	transduction
Pex19	PF04614.7	gi|568164050|ref|YP_008947492.1|	-	0.25	10.9	4.0	0.3	10.6	2.8	1.1	1	0	0	1	1	1	0	Pex19	protein	family
T2SF	PF00482.18	gi|568164050|ref|YP_008947492.1|	-	2	8.3	6.8	0.99	9.3	1.5	2.2	2	1	0	2	2	2	0	Type	II	secretion	system	(T2SS),	protein	F
FKBP_N	PF01346.13	gi|568164050|ref|YP_008947492.1|	-	3	7.8	8.2	16	5.5	2.2	2.1	2	0	0	2	2	2	0	Domain	amino	terminal	to	FKBP-type	peptidyl-prolyl	isomerase
MutS_IV	PF05190.13	gi|568164050|ref|YP_008947492.1|	-	4.4	7.5	6.6	18	5.5	0.1	2.6	2	1	0	2	2	2	0	MutS	family	domain	IV
DUF4011	PF13195.1	gi|568164050|ref|YP_008947492.1|	-	7.7	6.5	8.8	20	5.1	6.1	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF4011)
Ribosomal_S19e	PF01090.14	gi|568164051|ref|YP_008947493.1|	-	8.7e-51	171.0	0.0	1e-50	170.8	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S19e
HTH_12	PF08461.5	gi|568164051|ref|YP_008947493.1|	-	0.01	15.5	0.0	0.037	13.7	0.0	1.8	2	0	0	2	2	2	0	Ribonuclease	R	winged-helix	domain
HTH_45	PF14947.1	gi|568164051|ref|YP_008947493.1|	-	0.016	14.9	0.0	0.03	14.1	0.0	1.5	1	0	0	1	1	1	0	Winged	helix-turn-helix
Mrr_N	PF14338.1	gi|568164051|ref|YP_008947493.1|	-	0.022	14.8	0.0	0.045	13.8	0.0	1.5	1	0	0	1	1	1	0	Mrr	N-terminal	domain
TrmB	PF01978.14	gi|568164051|ref|YP_008947493.1|	-	0.043	13.5	0.0	0.088	12.5	0.0	1.6	1	1	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
DUF2250	PF10007.4	gi|568164051|ref|YP_008947493.1|	-	0.05	13.5	0.1	0.11	12.4	0.0	1.6	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
RuvB_C	PF05491.8	gi|568164051|ref|YP_008947493.1|	-	0.08	12.5	0.1	0.18	11.4	0.0	1.6	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	ruvB	C-terminus
Rrf2	PF02082.15	gi|568164051|ref|YP_008947493.1|	-	0.082	13.0	0.1	0.15	12.1	0.0	1.4	1	0	0	1	1	1	0	Transcriptional	regulator
QRPTase_C	PF01729.14	gi|568164052|ref|YP_008947494.1|	-	7e-21	74.4	0.0	9.9e-21	73.9	0.0	1.2	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
QRPTase_N	PF02749.11	gi|568164052|ref|YP_008947494.1|	-	0.00012	21.8	0.0	0.00021	21.0	0.0	1.4	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
Antitoxin-MazE	PF04014.13	gi|568164053|ref|YP_008947495.1|	-	8.6e-09	34.9	0.1	4.3e-08	32.7	0.0	2.2	2	0	0	2	2	2	1	Antidote-toxin	recognition	MazE
PhoU	PF01895.14	gi|568164053|ref|YP_008947495.1|	-	0.0011	19.4	2.8	0.0011	19.4	1.9	2.9	3	0	0	3	3	3	2	PhoU	domain
Cytochrom_B562	PF07361.6	gi|568164053|ref|YP_008947495.1|	-	0.064	13.6	1.2	0.55	10.6	0.3	2.6	3	0	0	3	3	3	0	Cytochrome	b562
Adeno_E4	PF05385.6	gi|568164053|ref|YP_008947495.1|	-	0.13	12.1	0.9	0.95	9.4	0.2	2.3	2	0	0	2	2	2	0	Mastadenovirus	early	E4	13	kDa	protein
DUF711	PF05167.7	gi|568164054|ref|YP_008947496.1|	-	1.8e-75	254.1	0.0	2.5e-75	253.7	0.0	1.1	1	0	0	1	1	1	1	Uncharacterised	ACR	(DUF711)
DrsE_2	PF13686.1	gi|568164055|ref|YP_008947497.1|	-	4.7e-16	58.9	0.1	7.2e-15	55.0	0.1	1.9	1	1	0	1	1	1	1	DsrE/DsrF/DrsH-like	family
DrsE	PF02635.10	gi|568164055|ref|YP_008947497.1|	-	3.9e-08	33.3	0.0	5e-08	33.0	0.0	1.2	1	0	0	1	1	1	1	DsrE/DsrF-like	family
GUCT	PF08152.7	gi|568164055|ref|YP_008947497.1|	-	0.0061	16.5	0.0	0.0084	16.0	0.0	1.2	1	0	0	1	1	1	1	GUCT	(NUC152)	domain
TusA	PF01206.12	gi|568164056|ref|YP_008947498.1|	-	3.1e-09	36.3	0.0	3.8e-09	36.0	0.0	1.0	1	0	0	1	1	1	1	Sulfurtransferase	TusA
SH3_4	PF06347.8	gi|568164056|ref|YP_008947498.1|	-	0.03	13.8	1.3	0.064	12.8	0.9	1.7	1	1	0	1	1	1	0	Bacterial	SH3	domain
PALP	PF00291.20	gi|568164057|ref|YP_008947499.1|	-	6.1e-52	176.7	0.0	7.6e-52	176.4	0.0	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
Pkinase	PF00069.20	gi|568164059|ref|YP_008947501.1|	-	0.0025	17.0	0.1	0.0067	15.5	0.0	1.5	1	1	0	1	1	1	1	Protein	kinase	domain
DUF2671	PF10877.3	gi|568164059|ref|YP_008947501.1|	-	0.017	14.9	0.0	0.044	13.5	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2671)
S1-like	PF14444.1	gi|568164059|ref|YP_008947501.1|	-	0.04	13.6	0.0	0.079	12.6	0.0	1.4	1	0	0	1	1	1	0	S1-like
zf-ribbon_3	PF13248.1	gi|568164060|ref|YP_008947502.1|	-	0.013	14.6	0.0	0.017	14.3	0.0	1.3	1	0	0	1	1	1	0	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|568164060|ref|YP_008947502.1|	-	0.031	13.6	0.1	0.047	13.0	0.0	1.3	1	0	0	1	1	1	0	TFIIB	zinc-binding
zf-HIT	PF04438.11	gi|568164060|ref|YP_008947502.1|	-	0.086	12.4	0.4	0.12	12.0	0.3	1.1	1	0	0	1	1	1	0	HIT	zinc	finger
zf-IS66	PF13005.2	gi|568164060|ref|YP_008947502.1|	-	0.17	11.8	0.8	0.24	11.3	0.5	1.2	1	0	0	1	1	1	0	zinc-finger	binding	domain	of	transposase	IS66
zf-GRF	PF06839.7	gi|568164060|ref|YP_008947502.1|	-	0.22	11.4	1.8	0.28	11.1	0.3	1.8	1	1	1	2	2	2	0	GRF	zinc	finger
Mob_synth_C	PF06463.8	gi|568164061|ref|YP_008947503.1|	-	4.1e-25	87.9	0.1	6.5e-25	87.2	0.0	1.3	1	0	0	1	1	1	1	Molybdenum	Cofactor	Synthesis	C
Radical_SAM	PF04055.16	gi|568164061|ref|YP_008947503.1|	-	1e-23	84.3	0.1	2.5e-23	83.0	0.0	1.6	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|568164061|ref|YP_008947503.1|	-	1.6e-08	34.7	0.1	6.5e-08	32.7	0.0	1.9	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|568164061|ref|YP_008947503.1|	-	1.4e-07	31.5	0.0	4.3e-07	29.9	0.0	1.8	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
DUF3502	PF12010.3	gi|568164061|ref|YP_008947503.1|	-	0.012	15.6	0.0	1.2	9.0	0.0	2.4	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3502)
Peptidase_M24	PF00557.19	gi|568164062|ref|YP_008947504.1|	-	1.6e-62	210.8	0.8	2e-62	210.4	0.5	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.13	gi|568164062|ref|YP_008947504.1|	-	1.1e-15	58.2	0.0	2.2e-15	57.2	0.0	1.5	1	0	0	1	1	1	1	Creatinase/Prolidase	N-terminal	domain
Peptidase_U35_2	PF14550.1	gi|568164062|ref|YP_008947504.1|	-	0.078	12.6	0.1	0.16	11.5	0.0	1.6	1	0	0	1	1	1	0	Putative	phage	protease	XkdF
GTP_cyclohydroI	PF01227.17	gi|568164063|ref|YP_008947505.1|	-	1.2e-62	210.4	0.1	1.7e-62	209.8	0.0	1.3	1	1	0	1	1	1	1	GTP	cyclohydrolase	I
DUF2939	PF11159.3	gi|568164063|ref|YP_008947505.1|	-	0.04	14.1	0.0	0.13	12.4	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2939)
MarR	PF01047.17	gi|568164064|ref|YP_008947506.1|	-	3.4e-10	39.4	0.2	9.3e-09	34.8	0.1	2.8	3	0	0	3	3	3	1	MarR	family
HTH_24	PF13412.1	gi|568164064|ref|YP_008947506.1|	-	8.5e-08	31.4	1.6	3.2e-07	29.6	0.9	2.2	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
MarR_2	PF12802.2	gi|568164064|ref|YP_008947506.1|	-	3.4e-07	29.8	0.0	6.1e-07	29.0	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_5	PF01022.15	gi|568164064|ref|YP_008947506.1|	-	7.6e-06	25.4	0.4	1.5e-05	24.5	0.3	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
TrmB	PF01978.14	gi|568164064|ref|YP_008947506.1|	-	5.1e-05	22.9	0.2	0.0011	18.6	0.2	2.3	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_Crp_2	PF13545.1	gi|568164064|ref|YP_008947506.1|	-	0.00024	20.8	0.1	0.00053	19.7	0.0	1.5	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_27	PF13463.1	gi|568164064|ref|YP_008947506.1|	-	0.00035	20.8	0.1	0.0011	19.2	0.0	1.8	2	0	0	2	2	1	1	Winged	helix	DNA-binding	domain
B-block_TFIIIC	PF04182.7	gi|568164064|ref|YP_008947506.1|	-	0.0013	18.4	0.1	0.017	14.9	0.1	2.3	2	0	0	2	2	2	1	B-block	binding	subunit	of	TFIIIC
TFIIE_alpha	PF02002.12	gi|568164064|ref|YP_008947506.1|	-	0.0029	17.0	0.5	0.0029	17.0	0.4	1.8	2	0	0	2	2	2	1	TFIIE	alpha	subunit
HTH_IclR	PF09339.5	gi|568164064|ref|YP_008947506.1|	-	0.0037	16.8	0.0	0.0063	16.0	0.0	1.4	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_36	PF13730.1	gi|568164064|ref|YP_008947506.1|	-	0.0082	16.2	0.1	0.039	14.0	0.1	2.2	2	1	0	2	2	2	1	Helix-turn-helix	domain
Cdc6_C	PF09079.6	gi|568164064|ref|YP_008947506.1|	-	0.0088	15.7	0.1	0.017	14.8	0.1	1.4	1	0	0	1	1	1	1	CDC6,	C	terminal
Sp100	PF03172.8	gi|568164064|ref|YP_008947506.1|	-	0.013	15.5	0.5	0.12	12.3	0.0	2.8	4	0	0	4	4	4	0	Sp100	domain
HTH_45	PF14947.1	gi|568164064|ref|YP_008947506.1|	-	0.014	15.1	0.3	0.27	11.0	0.2	2.8	3	0	0	3	3	3	0	Winged	helix-turn-helix
HTH_9	PF08221.6	gi|568164064|ref|YP_008947506.1|	-	0.018	14.9	0.1	0.034	14.0	0.1	1.5	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
DUF2250	PF10007.4	gi|568164064|ref|YP_008947506.1|	-	0.066	13.1	0.1	0.14	12.1	0.1	1.6	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Gln-synt_C	PF00120.19	gi|568164065|ref|YP_008947507.1|	-	1.5e-99	332.4	0.0	1.8e-99	332.1	0.0	1.1	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.14	gi|568164065|ref|YP_008947507.1|	-	2.9e-24	84.4	0.0	6.2e-24	83.3	0.0	1.6	1	0	0	1	1	1	1	Glutamine	synthetase,	beta-Grasp	domain
ABC_tran	PF00005.22	gi|568164066|ref|YP_008947508.1|	-	9.9e-22	77.7	0.0	1.4e-21	77.2	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|568164066|ref|YP_008947508.1|	-	5e-11	43.1	7.1	3.3e-05	24.0	1.4	2.1	1	1	1	2	2	2	2	AAA	domain
AAA_10	PF12846.2	gi|568164066|ref|YP_008947508.1|	-	1.6e-06	27.7	0.1	0.02	14.3	0.0	2.4	2	1	1	3	3	3	2	AAA-like	domain
AAA_22	PF13401.1	gi|568164066|ref|YP_008947508.1|	-	8.4e-06	25.9	0.2	1.8e-05	24.8	0.1	1.5	1	1	0	1	1	1	1	AAA	domain
Zeta_toxin	PF06414.7	gi|568164066|ref|YP_008947508.1|	-	3e-05	23.2	0.0	0.00017	20.7	0.0	1.9	2	0	0	2	2	2	1	Zeta	toxin
AAA_13	PF13166.1	gi|568164066|ref|YP_008947508.1|	-	3.5e-05	22.5	0.7	7.7e-05	21.3	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|568164066|ref|YP_008947508.1|	-	4e-05	24.4	0.7	8.5e-05	23.3	0.5	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.1	gi|568164066|ref|YP_008947508.1|	-	8e-05	23.0	9.9	0.0023	18.2	6.9	2.2	1	1	0	1	1	1	1	AAA	domain
T2SE	PF00437.15	gi|568164066|ref|YP_008947508.1|	-	0.00032	19.7	0.1	0.00053	18.9	0.1	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
NB-ARC	PF00931.17	gi|568164066|ref|YP_008947508.1|	-	0.00032	19.6	0.1	0.00072	18.4	0.0	1.5	1	0	0	1	1	1	1	NB-ARC	domain
AAA_16	PF13191.1	gi|568164066|ref|YP_008947508.1|	-	0.00099	19.1	0.0	0.0011	18.9	0.0	1.2	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_18	PF13238.1	gi|568164066|ref|YP_008947508.1|	-	0.0012	19.1	3.9	0.0035	17.6	2.7	1.8	1	1	0	1	1	1	1	AAA	domain
NACHT	PF05729.7	gi|568164066|ref|YP_008947508.1|	-	0.0017	18.0	0.1	0.0031	17.2	0.1	1.4	1	0	0	1	1	1	1	NACHT	domain
Arch_ATPase	PF01637.13	gi|568164066|ref|YP_008947508.1|	-	0.0021	17.8	4.4	0.011	15.4	3.1	1.9	1	1	0	1	1	1	1	Archaeal	ATPase
AAA_29	PF13555.1	gi|568164066|ref|YP_008947508.1|	-	0.0022	17.4	0.1	0.0039	16.6	0.1	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_14	PF13173.1	gi|568164066|ref|YP_008947508.1|	-	0.0038	17.1	4.7	0.53	10.1	3.2	2.3	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|568164066|ref|YP_008947508.1|	-	0.0065	16.6	0.2	0.022	14.9	0.2	2.0	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_19	PF13245.1	gi|568164066|ref|YP_008947508.1|	-	0.013	15.2	0.0	0.021	14.5	0.0	1.4	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_24	PF13479.1	gi|568164066|ref|YP_008947508.1|	-	0.014	15.0	0.1	0.03	13.8	0.1	1.5	1	0	0	1	1	1	0	AAA	domain
DUF2075	PF09848.4	gi|568164066|ref|YP_008947508.1|	-	0.014	14.3	0.1	0.021	13.8	0.0	1.4	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_33	PF13671.1	gi|568164066|ref|YP_008947508.1|	-	0.017	15.0	0.0	0.04	13.8	0.0	1.8	1	1	0	1	1	1	0	AAA	domain
AAA_15	PF13175.1	gi|568164066|ref|YP_008947508.1|	-	0.019	13.9	14.9	0.076	12.0	9.8	1.8	1	1	0	1	1	1	0	AAA	ATPase	domain
PIF1	PF05970.9	gi|568164066|ref|YP_008947508.1|	-	0.02	13.8	0.3	0.05	12.5	0.0	1.7	2	0	0	2	2	2	0	PIF1-like	helicase
SMC_N	PF02463.14	gi|568164066|ref|YP_008947508.1|	-	0.023	13.9	0.1	0.05	12.8	0.0	1.5	1	0	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
Miro	PF08477.8	gi|568164066|ref|YP_008947508.1|	-	0.024	15.1	0.2	0.076	13.5	0.0	1.8	2	1	0	2	2	2	0	Miro-like	protein
UPF0079	PF02367.12	gi|568164066|ref|YP_008947508.1|	-	0.034	13.7	0.1	0.061	12.9	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
DUF258	PF03193.11	gi|568164066|ref|YP_008947508.1|	-	0.039	13.1	0.0	0.08	12.1	0.0	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF258
PduV-EutP	PF10662.4	gi|568164066|ref|YP_008947508.1|	-	0.044	13.2	0.0	0.073	12.5	0.0	1.5	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_30	PF13604.1	gi|568164066|ref|YP_008947508.1|	-	0.044	13.3	0.0	0.056	13.0	0.0	1.4	1	1	0	1	1	1	0	AAA	domain
SbcCD_C	PF13558.1	gi|568164066|ref|YP_008947508.1|	-	0.046	13.6	0.0	3.6	7.5	0.0	2.5	2	0	0	2	2	2	0	Putative	exonuclease	SbcCD,	C	subunit
MobB	PF03205.9	gi|568164066|ref|YP_008947508.1|	-	0.078	12.6	0.8	0.14	11.8	0.1	1.8	2	1	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NTPase_1	PF03266.10	gi|568164066|ref|YP_008947508.1|	-	0.12	12.0	0.1	0.27	10.9	0.1	1.5	1	0	0	1	1	1	0	NTPase
RNA_helicase	PF00910.17	gi|568164066|ref|YP_008947508.1|	-	0.14	12.3	0.2	0.51	10.5	0.0	1.9	2	1	0	2	2	2	0	RNA	helicase
Thioredoxin	PF00085.15	gi|568164067|ref|YP_008947509.1|	-	4.1e-23	81.0	0.0	5.9e-23	80.5	0.0	1.3	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.1	gi|568164067|ref|YP_008947509.1|	-	6.6e-07	29.5	1.0	4.2e-06	26.9	0.2	2.3	2	1	0	2	2	2	1	Thioredoxin-like	domain
Thioredoxin_8	PF13905.1	gi|568164067|ref|YP_008947509.1|	-	0.00013	21.9	0.4	0.0027	17.7	0.1	2.5	1	1	2	3	3	3	1	Thioredoxin-like
Thioredoxin_7	PF13899.1	gi|568164067|ref|YP_008947509.1|	-	0.0025	17.7	0.0	0.004	17.1	0.0	1.4	1	0	0	1	1	1	1	Thioredoxin-like
Thioredoxin_3	PF13192.1	gi|568164067|ref|YP_008947509.1|	-	0.0033	17.1	0.0	0.0077	16.0	0.0	1.7	1	1	0	1	1	1	1	Thioredoxin	domain
Redoxin	PF08534.5	gi|568164067|ref|YP_008947509.1|	-	0.065	12.7	0.3	0.1	12.1	0.2	1.4	1	1	0	1	1	1	0	Redoxin
Thioredoxin_9	PF14595.1	gi|568164067|ref|YP_008947509.1|	-	0.12	11.9	0.1	0.19	11.2	0.1	1.5	1	1	0	1	1	1	0	Thioredoxin
GHMP_kinases_C	PF08544.8	gi|568164068|ref|YP_008947510.1|	-	0.0068	16.5	0.0	0.013	15.7	0.0	1.4	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
GHMP_kinases_N	PF00288.21	gi|568164068|ref|YP_008947510.1|	-	0.024	14.6	0.0	0.04	13.9	0.0	1.4	1	0	0	1	1	1	0	GHMP	kinases	N	terminal	domain
Ribosomal_L30_N	PF08079.7	gi|568164068|ref|YP_008947510.1|	-	0.042	13.8	0.0	0.078	13.0	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	L30	N-terminal	domain
Nol1_Nop2_Fmu	PF01189.12	gi|568164069|ref|YP_008947511.1|	-	2.5e-30	105.8	0.0	1.9e-29	102.9	0.0	2.0	1	1	1	2	2	2	1	NOL1/NOP2/sun	family
Methyltransf_31	PF13847.1	gi|568164069|ref|YP_008947511.1|	-	1.1e-07	31.5	0.0	2e-07	30.7	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
PUA	PF01472.15	gi|568164069|ref|YP_008947511.1|	-	7.4e-05	22.4	0.7	0.00015	21.3	0.5	1.5	1	0	0	1	1	1	1	PUA	domain
Methyltransf_26	PF13659.1	gi|568164069|ref|YP_008947511.1|	-	0.00022	21.2	0.0	0.00033	20.6	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|568164069|ref|YP_008947511.1|	-	0.0012	19.3	0.0	0.0041	17.6	0.0	1.9	2	0	0	2	2	2	1	Methyltransferase	domain
MTS	PF05175.9	gi|568164069|ref|YP_008947511.1|	-	0.0018	17.6	0.0	0.0033	16.8	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	small	domain
FtsJ	PF01728.14	gi|568164069|ref|YP_008947511.1|	-	0.019	14.9	0.0	0.038	13.9	0.0	1.4	1	1	0	1	1	1	0	FtsJ-like	methyltransferase
Hexapep	PF00132.19	gi|568164070|ref|YP_008947512.1|	-	3.1e-19	67.5	17.7	1.8e-07	30.3	2.1	4.6	3	1	2	5	5	5	4	Bacterial	transferase	hexapeptide	(six	repeats)
Hexapep_2	PF14602.1	gi|568164070|ref|YP_008947512.1|	-	3.4e-07	29.7	8.4	5e-06	25.9	2.0	3.5	4	0	0	4	4	4	2	Hexapeptide	repeat	of	succinyl-transferase
Radical_SAM	PF04055.16	gi|568164071|ref|YP_008947513.1|	-	4.2e-15	56.3	0.1	6.7e-14	52.4	0.1	2.4	1	1	1	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|568164071|ref|YP_008947513.1|	-	2.2e-10	40.8	0.0	1.1e-09	38.4	0.0	2.1	2	1	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|568164071|ref|YP_008947513.1|	-	3.6e-10	39.8	0.0	2.1e-09	37.4	0.0	2.2	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
DUF2073	PF09846.4	gi|568164071|ref|YP_008947513.1|	-	0.039	13.6	0.1	0.12	12.0	0.0	1.8	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2073)
SPASM	PF13186.1	gi|568164071|ref|YP_008947513.1|	-	0.12	12.7	0.7	0.61	10.4	0.0	2.4	3	0	0	3	3	3	0	Iron-sulfur	cluster-binding	domain
Sas10_Utp3	PF04000.10	gi|568164071|ref|YP_008947513.1|	-	0.12	12.5	1.5	0.92	9.7	0.0	2.4	2	0	0	2	2	2	0	Sas10/Utp3/C1D	family
Phage_integrase	PF00589.17	gi|568164072|ref|YP_008947514.1|	-	4.6e-39	133.8	0.9	4.6e-39	133.8	0.6	1.6	2	0	0	2	2	2	1	Phage	integrase	family
Phage_int_SAM_4	PF13495.1	gi|568164072|ref|YP_008947514.1|	-	3.4e-14	52.9	0.5	9.4e-09	35.4	0.0	2.5	1	1	1	2	2	2	2	Phage	integrase,	N-terminal	SAM-like	domain
Phage_int_SAM_1	PF02899.12	gi|568164072|ref|YP_008947514.1|	-	8.5e-10	38.6	0.7	4.2e-05	23.6	0.0	2.8	2	1	1	3	3	3	2	Phage	integrase,	N-terminal	SAM-like	domain
Integrase_1	PF12835.2	gi|568164072|ref|YP_008947514.1|	-	9.5e-07	28.7	0.6	1.6e-06	28.0	0.4	1.3	1	0	0	1	1	1	1	Integrase
Ribosomal_S28e	PF01200.13	gi|568164072|ref|YP_008947514.1|	-	0.069	12.8	0.1	0.17	11.6	0.1	1.6	1	0	0	1	1	1	0	Ribosomal	protein	S28e
Pyr_redox_2	PF07992.9	gi|568164073|ref|YP_008947516.1|	-	0.00016	21.6	0.0	0.0097	15.7	0.0	2.7	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|568164073|ref|YP_008947516.1|	-	0.0089	16.4	0.0	4	7.8	0.0	2.5	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|568164073|ref|YP_008947516.1|	-	0.013	15.6	0.0	9.8	6.1	0.0	2.9	3	0	0	3	3	3	0	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|568164073|ref|YP_008947516.1|	-	0.09	11.6	0.0	7.6	5.3	0.0	2.2	2	0	0	2	2	2	0	FAD	dependent	oxidoreductase
VitK2_biosynth	PF02621.9	gi|568164880|ref|YP_008947517.1|	-	0.0012	18.0	0.0	0.83	8.7	0.0	2.4	1	1	1	2	2	2	2	Menaquinone	biosynthesis
T2SE	PF00437.15	gi|568164074|ref|YP_008947519.1|	-	4.8e-42	143.7	0.0	1e-41	142.6	0.0	1.5	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
ABC_tran	PF00005.22	gi|568164074|ref|YP_008947519.1|	-	2e-05	24.9	0.0	5.3e-05	23.5	0.0	1.7	1	0	0	1	1	1	1	ABC	transporter
Arch_ATPase	PF01637.13	gi|568164074|ref|YP_008947519.1|	-	5.4e-05	22.9	2.4	0.00033	20.4	0.0	3.0	4	0	0	4	4	3	1	Archaeal	ATPase
AAA_29	PF13555.1	gi|568164074|ref|YP_008947519.1|	-	0.00017	21.0	0.0	0.00041	19.8	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.1	gi|568164074|ref|YP_008947519.1|	-	0.00031	20.8	0.0	0.001	19.2	0.0	1.9	1	0	0	1	1	1	1	AAA	domain
cobW	PF02492.14	gi|568164074|ref|YP_008947519.1|	-	0.00038	19.9	0.1	0.00067	19.1	0.0	1.4	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_21	PF13304.1	gi|568164074|ref|YP_008947519.1|	-	0.00053	20.0	0.1	0.00053	20.0	0.1	3.2	3	0	0	3	3	3	1	AAA	domain
MobB	PF03205.9	gi|568164074|ref|YP_008947519.1|	-	0.00065	19.4	0.0	0.0021	17.7	0.0	1.9	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_17	PF13207.1	gi|568164074|ref|YP_008947519.1|	-	0.00089	20.0	0.1	0.0035	18.1	0.0	2.1	2	0	0	2	2	1	1	AAA	domain
AAA_16	PF13191.1	gi|568164074|ref|YP_008947519.1|	-	0.001	19.0	0.0	0.0028	17.6	0.0	1.7	2	0	0	2	2	1	1	AAA	ATPase	domain
AAA_14	PF13173.1	gi|568164074|ref|YP_008947519.1|	-	0.0011	18.8	0.2	0.004	17.0	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_18	PF13238.1	gi|568164074|ref|YP_008947519.1|	-	0.0022	18.2	2.5	0.003	17.8	0.0	2.5	3	0	0	3	3	3	1	AAA	domain
AAA_19	PF13245.1	gi|568164074|ref|YP_008947519.1|	-	0.0023	17.6	0.0	0.007	16.0	0.0	1.7	1	0	0	1	1	1	1	Part	of	AAA	domain
Pox_A32	PF04665.7	gi|568164074|ref|YP_008947519.1|	-	0.0034	16.7	0.0	0.007	15.6	0.0	1.5	1	0	0	1	1	1	1	Poxvirus	A32	protein
AAA_10	PF12846.2	gi|568164074|ref|YP_008947519.1|	-	0.0035	16.8	0.0	0.0076	15.7	0.0	1.6	1	0	0	1	1	1	1	AAA-like	domain
MMR_HSR1	PF01926.18	gi|568164074|ref|YP_008947519.1|	-	0.0036	17.2	0.0	0.0096	15.8	0.0	1.8	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
FtsK_SpoIIIE	PF01580.13	gi|568164074|ref|YP_008947519.1|	-	0.0088	15.5	0.0	0.02	14.4	0.0	1.5	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
AAA_28	PF13521.1	gi|568164074|ref|YP_008947519.1|	-	0.01	15.8	0.0	0.017	15.0	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
SRPRB	PF09439.5	gi|568164074|ref|YP_008947519.1|	-	0.016	14.4	0.0	0.032	13.4	0.0	1.5	1	0	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
NACHT	PF05729.7	gi|568164074|ref|YP_008947519.1|	-	0.016	14.8	0.0	0.032	13.9	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
RNA12	PF10443.4	gi|568164074|ref|YP_008947519.1|	-	0.017	13.6	0.0	0.043	12.3	0.0	1.6	2	0	0	2	2	2	0	RNA12	protein
Miro	PF08477.8	gi|568164074|ref|YP_008947519.1|	-	0.018	15.5	0.0	0.064	13.7	0.0	1.9	2	0	0	2	2	1	0	Miro-like	protein
AAA_33	PF13671.1	gi|568164074|ref|YP_008947519.1|	-	0.022	14.6	0.0	0.039	13.8	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
DUF258	PF03193.11	gi|568164074|ref|YP_008947519.1|	-	0.024	13.8	0.0	0.045	12.9	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_5	PF07728.9	gi|568164074|ref|YP_008947519.1|	-	0.034	13.8	0.0	0.07	12.8	0.0	1.5	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
Zeta_toxin	PF06414.7	gi|568164074|ref|YP_008947519.1|	-	0.035	13.2	0.0	0.1	11.6	0.0	1.7	2	0	0	2	2	2	0	Zeta	toxin
AAA	PF00004.24	gi|568164074|ref|YP_008947519.1|	-	0.039	14.1	0.0	0.088	13.0	0.0	1.7	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Guanylate_kin	PF00625.16	gi|568164074|ref|YP_008947519.1|	-	0.04	13.3	0.0	0.1	12.0	0.0	1.7	1	0	0	1	1	1	0	Guanylate	kinase
AAA_23	PF13476.1	gi|568164074|ref|YP_008947519.1|	-	0.04	14.2	17.4	0.028	14.7	8.2	2.8	2	1	0	2	2	2	0	AAA	domain
ResIII	PF04851.10	gi|568164074|ref|YP_008947519.1|	-	0.061	13.1	0.2	0.18	11.6	0.0	1.8	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
PduV-EutP	PF10662.4	gi|568164074|ref|YP_008947519.1|	-	0.076	12.5	0.0	0.2	11.1	0.0	1.6	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
Mg_chelatase	PF01078.16	gi|568164074|ref|YP_008947519.1|	-	0.08	12.0	0.0	0.14	11.2	0.0	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
SMC_N	PF02463.14	gi|568164074|ref|YP_008947519.1|	-	0.082	12.1	0.0	0.19	10.9	0.0	1.6	1	0	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
AAA_24	PF13479.1	gi|568164074|ref|YP_008947519.1|	-	0.085	12.4	0.3	0.62	9.6	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
AAA_30	PF13604.1	gi|568164074|ref|YP_008947519.1|	-	0.09	12.3	0.0	0.16	11.5	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
Viral_helicase1	PF01443.13	gi|568164074|ref|YP_008947519.1|	-	0.13	11.7	0.0	0.23	10.9	0.0	1.5	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
HTH_30	PF13556.1	gi|568164074|ref|YP_008947519.1|	-	0.15	11.6	0.1	0.47	10.0	0.1	1.8	1	0	0	1	1	1	0	PucR	C-terminal	helix-turn-helix	domain
DUF4017	PF13209.1	gi|568164882|ref|YP_008947520.1|	-	1.4	8.7	8.6	0.085	12.6	1.6	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4017)
DUF1628	PF07790.6	gi|568164075|ref|YP_008947521.1|	-	7.8e-05	23.3	1.9	0.00014	22.5	1.3	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1628)
CBM_4_9	PF02018.12	gi|568164075|ref|YP_008947521.1|	-	0.0081	16.1	0.1	0.012	15.6	0.1	1.4	1	1	0	1	1	1	1	Carbohydrate	binding	domain
DUF756	PF05506.7	gi|568164075|ref|YP_008947521.1|	-	0.0087	16.5	0.0	0.012	16.0	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF756)
DUF4131	PF13567.1	gi|568164075|ref|YP_008947521.1|	-	0.037	13.4	0.0	0.046	13.1	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
CPSase_sm_chain	PF00988.17	gi|568164075|ref|YP_008947521.1|	-	0.09	12.2	0.3	0.12	11.9	0.2	1.2	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	small	chain,	CPSase	domain
EcsB	PF05975.7	gi|568164075|ref|YP_008947521.1|	-	0.093	11.1	0.1	0.12	10.7	0.1	1.1	1	0	0	1	1	1	0	Bacterial	ABC	transporter	protein	EcsB
ETRAMP	PF09716.5	gi|568164075|ref|YP_008947521.1|	-	0.25	11.3	1.4	0.62	10.0	1.0	1.7	1	0	0	1	1	1	0	Malarial	early	transcribed	membrane	protein	(ETRAMP)
Big_5	PF13205.1	gi|568164075|ref|YP_008947521.1|	-	0.37	11.4	4.6	1.5	9.4	3.2	1.9	1	1	0	1	1	1	0	Bacterial	Ig-like	domain
Jiraiya	PF15038.1	gi|568164883|ref|YP_008947522.1|	-	0.014	14.8	0.2	0.017	14.5	0.1	1.2	1	0	0	1	1	1	0	Jiraiya
Sec23_trunk	PF04811.10	gi|568164883|ref|YP_008947522.1|	-	0.094	12.0	0.1	0.097	12.0	0.1	1.2	1	0	0	1	1	1	0	Sec23/Sec24	trunk	domain
HhH-GPD	PF00730.20	gi|568164076|ref|YP_008947523.1|	-	2.4e-16	59.9	0.0	4.2e-16	59.1	0.0	1.4	2	0	0	2	2	2	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
EndIII_4Fe-2S	PF10576.4	gi|568164076|ref|YP_008947523.1|	-	0.00025	21.0	4.3	0.00045	20.2	3.0	1.4	1	0	0	1	1	1	1	Iron-sulfur	binding	domain	of	endonuclease	III
HHH	PF00633.18	gi|568164076|ref|YP_008947523.1|	-	0.0028	17.2	0.0	0.0089	15.6	0.0	1.9	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_8	PF14716.1	gi|568164076|ref|YP_008947523.1|	-	0.082	13.1	0.0	0.2	11.8	0.0	1.7	1	0	0	1	1	1	0	Helix-hairpin-helix	domain
HHH_5	PF14520.1	gi|568164076|ref|YP_008947523.1|	-	0.085	13.0	0.5	0.27	11.4	0.3	1.9	1	1	0	1	1	1	0	Helix-hairpin-helix	domain
ParBc	PF02195.13	gi|568164077|ref|YP_008947524.1|	-	1.8e-10	40.7	0.0	3e-10	40.0	0.0	1.3	1	0	0	1	1	1	1	ParB-like	nuclease	domain
DUF1015	PF06245.6	gi|568164077|ref|YP_008947524.1|	-	8.3e-05	21.2	0.6	0.21	10.0	0.1	2.9	1	1	1	3	3	3	2	Protein	of	unknown	function	(DUF1015)
Glycos_transf_2	PF00535.21	gi|568164078|ref|YP_008947525.1|	-	2.5e-22	79.3	0.1	3.8e-22	78.7	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|568164078|ref|YP_008947525.1|	-	1.6e-20	73.9	0.0	2.2e-20	73.4	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|568164078|ref|YP_008947525.1|	-	3.7e-17	62.6	0.1	3.7e-17	62.6	0.1	2.1	2	0	0	2	2	2	1	Glycosyl	transferase	family	group	2
Glyco_transf_21	PF13506.1	gi|568164078|ref|YP_008947525.1|	-	3.8e-10	39.3	0.0	1.6e-09	37.2	0.0	1.9	1	1	1	2	2	2	1	Glycosyl	transferase	family	21
Glyco_tranf_2_2	PF10111.4	gi|568164078|ref|YP_008947525.1|	-	6.9e-08	31.9	0.0	1e-07	31.3	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Osmo_MPGsynth	PF09488.5	gi|568164078|ref|YP_008947525.1|	-	0.003	16.2	0.3	0.0045	15.7	0.2	1.2	1	0	0	1	1	1	1	Mannosyl-3-phosphoglycerate	synthase	(osmo_MPGsynth)
YrhK	PF14145.1	gi|568164078|ref|YP_008947525.1|	-	0.014	15.0	1.5	0.033	13.8	0.6	2.0	2	0	0	2	2	2	0	YrhK-like	protein
DEAD_assoc	PF08494.6	gi|568164079|ref|YP_008947526.1|	-	6.4e-59	198.8	0.1	1.2e-58	197.8	0.1	1.5	1	0	0	1	1	1	1	DEAD/H	associated
DEAD	PF00270.24	gi|568164079|ref|YP_008947526.1|	-	1.3e-29	102.9	0.0	6e-28	97.4	0.0	3.0	3	0	0	3	3	3	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|568164079|ref|YP_008947526.1|	-	6.1e-14	51.6	0.0	2e-13	49.9	0.0	1.9	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|568164079|ref|YP_008947526.1|	-	1.2e-06	28.5	0.0	6e-06	26.2	0.0	2.2	2	1	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Transketolase_C	PF02780.15	gi|568164079|ref|YP_008947526.1|	-	0.015	15.1	0.0	0.048	13.5	0.0	1.8	1	0	0	1	1	1	0	Transketolase,	C-terminal	domain
UDG	PF03167.14	gi|568164079|ref|YP_008947526.1|	-	0.16	11.4	0.0	0.35	10.3	0.0	1.5	1	0	0	1	1	1	0	Uracil	DNA	glycosylase	superfamily
AAA_19	PF13245.1	gi|568164079|ref|YP_008947526.1|	-	0.18	11.5	0.0	5.2	6.8	0.0	2.6	2	0	0	2	2	2	0	Part	of	AAA	domain
MGS	PF02142.17	gi|568164079|ref|YP_008947526.1|	-	0.59	10.0	2.7	2.1	8.3	0.1	3.1	3	1	0	3	3	3	0	MGS-like	domain
HrcA_DNA-bdg	PF03444.10	gi|568164080|ref|YP_008947527.1|	-	6.4e-36	121.6	0.3	1.4e-35	120.5	0.2	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
CBS	PF00571.23	gi|568164080|ref|YP_008947527.1|	-	1.3e-28	98.4	0.6	1.6e-14	53.3	0.5	2.4	2	0	0	2	2	2	2	CBS	domain
Rrf2	PF02082.15	gi|568164080|ref|YP_008947527.1|	-	6.2e-09	35.8	0.4	2.6e-08	33.8	0.0	2.3	2	1	0	2	2	2	1	Transcriptional	regulator
HTH_11	PF08279.7	gi|568164080|ref|YP_008947527.1|	-	2e-05	24.1	1.1	4e-05	23.1	0.1	2.0	2	0	0	2	2	2	1	HTH	domain
TrmB	PF01978.14	gi|568164080|ref|YP_008947527.1|	-	0.0027	17.3	0.5	0.0086	15.7	0.1	2.0	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|568164080|ref|YP_008947527.1|	-	0.02	14.2	0.9	0.048	13.0	0.6	1.8	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
TFIIH_BTF_p62_N	PF08567.6	gi|568164080|ref|YP_008947527.1|	-	0.034	13.7	0.0	0.08	12.6	0.0	1.6	1	0	0	1	1	1	0	TFIIH	p62	subunit,	N-terminal	domain
GntR	PF00392.16	gi|568164080|ref|YP_008947527.1|	-	0.036	13.4	0.0	0.15	11.5	0.0	2.0	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
RuvB_C	PF05491.8	gi|568164080|ref|YP_008947527.1|	-	0.045	13.3	0.0	0.1	12.2	0.0	1.6	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	ruvB	C-terminus
DUF2097	PF09870.4	gi|568164080|ref|YP_008947527.1|	-	0.052	13.6	3.3	0.39	10.8	0.1	2.6	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2097)
HTH_38	PF13936.1	gi|568164080|ref|YP_008947527.1|	-	0.057	12.9	0.1	0.13	11.8	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|568164080|ref|YP_008947527.1|	-	0.066	12.6	0.3	0.59	9.6	0.0	2.2	2	0	0	2	2	2	0	Sigma-70,	region	4
HTH_IclR	PF09339.5	gi|568164080|ref|YP_008947527.1|	-	0.066	12.8	0.0	0.13	11.8	0.0	1.5	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
DUF2192	PF09958.4	gi|568164081|ref|YP_008947528.1|	-	8.1e-87	290.2	6.5	9e-87	290.1	4.5	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2192)
DUF4070	PF13282.1	gi|568164081|ref|YP_008947528.1|	-	0.096	12.2	0.0	0.16	11.4	0.0	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4070)
FlaC_arch	PF05377.6	gi|568164082|ref|YP_008947529.1|	-	0.00073	19.3	2.2	0.0013	18.5	1.6	1.3	1	0	0	1	1	1	1	Flagella	accessory	protein	C	(FlaC)
Laminin_II	PF06009.7	gi|568164082|ref|YP_008947529.1|	-	0.0022	17.7	1.2	0.0031	17.2	0.8	1.2	1	0	0	1	1	1	1	Laminin	Domain	II
Spc7	PF08317.6	gi|568164082|ref|YP_008947529.1|	-	0.014	14.1	0.4	0.016	13.8	0.3	1.1	1	0	0	1	1	1	0	Spc7	kinetochore	protein
DUF3375	PF11855.3	gi|568164082|ref|YP_008947529.1|	-	0.029	13.1	0.0	0.035	12.8	0.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3375)
RmuC	PF02646.11	gi|568164082|ref|YP_008947529.1|	-	0.063	12.1	0.1	0.074	11.8	0.1	1.1	1	0	0	1	1	1	0	RmuC	family
WD40_alt	PF14077.1	gi|568164082|ref|YP_008947529.1|	-	0.16	11.6	3.3	0.27	10.9	0.9	2.1	1	1	1	2	2	2	0	Alternative	WD40	repeat	motif
GP41	PF00517.12	gi|568164082|ref|YP_008947529.1|	-	0.16	11.5	2.2	0.12	11.8	0.8	1.3	1	1	0	1	1	1	0	Retroviral	envelope	protein
bZIP_1	PF00170.16	gi|568164082|ref|YP_008947529.1|	-	0.32	10.9	2.2	0.86	9.6	1.5	1.7	1	1	0	1	1	1	0	bZIP	transcription	factor
DivIC	PF04977.10	gi|568164082|ref|YP_008947529.1|	-	0.64	9.5	2.6	3.6	7.1	1.8	1.9	1	1	0	1	1	1	0	Septum	formation	initiator
HTH_3	PF01381.17	gi|568164083|ref|YP_008947530.1|	-	2.6e-07	30.3	0.7	4.9e-07	29.4	0.0	1.8	2	0	0	2	2	2	1	Helix-turn-helix
HTH_26	PF13443.1	gi|568164083|ref|YP_008947530.1|	-	0.00026	21.1	0.5	0.0024	18.0	0.0	2.3	2	1	0	2	2	2	1	Cro/C1-type	HTH	DNA-binding	domain
HTH_19	PF12844.2	gi|568164083|ref|YP_008947530.1|	-	0.00028	20.8	0.8	0.0017	18.3	0.2	2.5	1	1	1	2	2	2	1	Helix-turn-helix	domain
Trp_repressor	PF01371.14	gi|568164083|ref|YP_008947530.1|	-	0.00079	19.2	0.1	0.0018	18.1	0.0	1.7	1	1	0	1	1	1	1	Trp	repressor	protein
HTH_11	PF08279.7	gi|568164083|ref|YP_008947530.1|	-	0.0014	18.2	0.2	0.0014	18.2	0.1	2.1	3	0	0	3	3	3	1	HTH	domain
DUF948	PF06103.6	gi|568164083|ref|YP_008947530.1|	-	0.002	17.9	2.4	0.0038	17.0	0.3	2.0	1	1	1	2	2	2	1	Bacterial	protein	of	unknown	function	(DUF948)
HTH_Tnp_ISL3	PF13542.1	gi|568164083|ref|YP_008947530.1|	-	0.0038	16.3	0.0	0.0058	15.7	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain	of	transposase	family	ISL3
Sigma70_r4_2	PF08281.7	gi|568164083|ref|YP_008947530.1|	-	0.0041	16.5	0.2	0.007	15.8	0.1	1.4	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_AsnC-type	PF13404.1	gi|568164083|ref|YP_008947530.1|	-	0.0053	16.2	5.5	0.46	10.0	1.4	3.3	2	1	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
HTH_31	PF13560.1	gi|568164083|ref|YP_008947530.1|	-	0.0053	16.9	0.0	0.0071	16.5	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|568164083|ref|YP_008947530.1|	-	0.011	15.3	0.0	0.021	14.4	0.0	1.5	1	0	0	1	1	1	0	Homeodomain-like	domain
HTH_24	PF13412.1	gi|568164083|ref|YP_008947530.1|	-	0.022	14.1	0.4	0.022	14.1	0.3	3.1	3	1	1	4	4	4	0	Winged	helix-turn-helix	DNA-binding
Fe_dep_repress	PF01325.14	gi|568164083|ref|YP_008947530.1|	-	0.024	14.5	0.0	0.052	13.4	0.0	1.5	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_Mga	PF08280.6	gi|568164083|ref|YP_008947530.1|	-	0.032	13.9	2.5	2.2	8.1	0.0	2.5	2	0	0	2	2	2	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
DUF3557	PF12078.3	gi|568164083|ref|YP_008947530.1|	-	0.036	13.7	0.4	0.83	9.3	0.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3557)
HTH_6	PF01418.12	gi|568164083|ref|YP_008947530.1|	-	0.041	13.6	0.3	0.14	11.9	0.2	1.9	1	1	0	1	1	1	0	Helix-turn-helix	domain,	rpiR	family
ENT	PF03735.9	gi|568164083|ref|YP_008947530.1|	-	0.042	13.5	0.3	0.11	12.1	0.1	1.9	1	1	1	2	2	2	0	ENT	domain
HTH_28	PF13518.1	gi|568164083|ref|YP_008947530.1|	-	0.065	13.2	0.1	0.13	12.2	0.1	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
HMGL-like	PF00682.14	gi|568164083|ref|YP_008947530.1|	-	0.074	12.6	1.3	0.084	12.5	0.9	1.0	1	0	0	1	1	1	0	HMGL-like
DUF3510	PF12022.3	gi|568164083|ref|YP_008947530.1|	-	0.078	13.0	0.3	0.098	12.7	0.2	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3510)
HTH_5	PF01022.15	gi|568164083|ref|YP_008947530.1|	-	0.09	12.4	1.1	0.47	10.1	0.1	2.3	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
LacI	PF00356.16	gi|568164083|ref|YP_008947530.1|	-	0.1	12.2	0.4	1.6	8.3	0.0	2.6	3	0	0	3	3	3	0	Bacterial	regulatory	proteins,	lacI	family
AAA_30	PF13604.1	gi|568164083|ref|YP_008947530.1|	-	0.14	11.6	0.1	0.14	11.6	0.1	1.1	1	0	0	1	1	1	0	AAA	domain
PP1_inhibitor	PF05361.7	gi|568164083|ref|YP_008947530.1|	-	0.49	10.0	2.7	0.64	9.7	1.6	1.5	1	1	0	1	1	1	0	PKC-activated	protein	phosphatase-1	inhibitor
Cauli_DNA-bind	PF03310.8	gi|568164083|ref|YP_008947530.1|	-	4.9	7.0	8.2	1.2	8.9	2.3	1.9	1	1	1	2	2	2	0	Caulimovirus	DNA-binding	protein
Aminotran_1_2	PF00155.16	gi|568164085|ref|YP_008947532.1|	-	1.8e-42	145.5	0.0	2.1e-42	145.3	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_MocR	PF12897.2	gi|568164085|ref|YP_008947532.1|	-	3.9e-11	42.1	0.0	5.3e-11	41.7	0.0	1.1	1	0	0	1	1	1	1	Alanine-glyoxylate	amino-transferase
DegT_DnrJ_EryC1	PF01041.12	gi|568164085|ref|YP_008947532.1|	-	0.00062	18.9	0.0	0.0011	18.1	0.0	1.4	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Cys_Met_Meta_PP	PF01053.15	gi|568164085|ref|YP_008947532.1|	-	0.0026	16.1	0.0	0.0048	15.2	0.0	1.3	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Beta_elim_lyase	PF01212.16	gi|568164085|ref|YP_008947532.1|	-	0.02	14.0	0.0	0.033	13.3	0.0	1.3	1	0	0	1	1	1	0	Beta-eliminating	lyase
Mst1_SARAH	PF11629.3	gi|568164085|ref|YP_008947532.1|	-	0.032	14.0	0.8	0.097	12.5	0.6	1.8	1	0	0	1	1	1	0	C	terminal	SARAH	domain	of	Mst1
MoCF_biosynth	PF00994.19	gi|568164086|ref|YP_008947533.1|	-	1.6e-28	98.9	0.1	2.5e-28	98.2	0.0	1.3	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
DUF4261	PF14080.1	gi|568164086|ref|YP_008947533.1|	-	0.03	14.1	0.4	1.1	9.1	0.0	2.9	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4261)
Abhydrolase_6	PF12697.2	gi|568164087|ref|YP_008947534.1|	-	7.5e-33	114.3	0.0	8.9e-33	114.0	0.0	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|568164087|ref|YP_008947534.1|	-	2.8e-21	76.1	0.0	8.4e-19	68.0	0.0	2.1	1	1	0	1	1	1	1	alpha/beta	hydrolase	fold
Abhydrolase_5	PF12695.2	gi|568164087|ref|YP_008947534.1|	-	1.4e-17	63.8	0.0	7.3e-17	61.4	0.0	1.8	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Hydrolase_4	PF12146.3	gi|568164087|ref|YP_008947534.1|	-	3.9e-05	23.4	0.0	8.3e-05	22.3	0.0	1.6	1	0	0	1	1	1	1	Putative	lysophospholipase
Ndr	PF03096.9	gi|568164087|ref|YP_008947534.1|	-	0.00033	19.2	0.0	0.00098	17.6	0.0	1.7	1	1	1	2	2	2	1	Ndr	family
Thioesterase	PF00975.15	gi|568164087|ref|YP_008947534.1|	-	0.001	19.3	0.0	0.0016	18.7	0.0	1.3	1	1	0	1	1	1	1	Thioesterase	domain
DUF1057	PF06342.7	gi|568164087|ref|YP_008947534.1|	-	0.002	17.0	0.1	0.032	13.0	0.0	2.1	2	0	0	2	2	2	1	Alpha/beta	hydrolase	of	unknown	function	(DUF1057)
PGAP1	PF07819.8	gi|568164087|ref|YP_008947534.1|	-	0.015	14.9	0.0	0.03	13.8	0.0	1.5	1	0	0	1	1	1	0	PGAP1-like	protein
DUF2305	PF10230.4	gi|568164087|ref|YP_008947534.1|	-	0.039	13.3	0.0	0.085	12.2	0.0	1.5	1	0	0	1	1	1	0	Uncharacterised	conserved	protein	(DUF2305)
DUF1749	PF08538.5	gi|568164087|ref|YP_008947534.1|	-	0.054	12.3	0.0	2.3	7.0	0.0	2.5	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1749)
B5	PF03484.10	gi|568164088|ref|YP_008947535.1|	-	1.5e-19	69.5	1.0	5.3e-17	61.3	0.1	2.7	2	0	0	2	2	2	2	tRNA	synthetase	B5	domain
B3_4	PF03483.12	gi|568164088|ref|YP_008947535.1|	-	4.7e-14	52.2	0.2	1.8e-13	50.3	0.0	2.0	2	0	0	2	2	2	1	B3/4	domain
tRNA-synt_2d	PF01409.15	gi|568164089|ref|YP_008947536.1|	-	6.2e-82	274.5	0.0	8.3e-82	274.0	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	II	core	domain	(F)
TrmB	PF01978.14	gi|568164089|ref|YP_008947536.1|	-	4.8e-08	32.5	3.6	1.2e-06	28.0	0.6	2.8	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|568164089|ref|YP_008947536.1|	-	7.5e-07	28.4	0.6	7.5e-07	28.4	0.4	2.2	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_34	PF13601.1	gi|568164089|ref|YP_008947536.1|	-	9.1e-06	25.6	0.1	2.3e-05	24.3	0.1	1.7	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_27	PF13463.1	gi|568164089|ref|YP_008947536.1|	-	1.3e-05	25.4	1.8	0.0032	17.7	0.0	3.7	4	0	0	4	4	4	1	Winged	helix	DNA-binding	domain
tRNA-synt_2	PF00152.15	gi|568164089|ref|YP_008947536.1|	-	5.2e-05	22.1	5.3	0.018	13.8	0.1	3.3	3	1	0	3	3	3	2	tRNA	synthetases	class	II	(D,	K	and	N)
MarR	PF01047.17	gi|568164089|ref|YP_008947536.1|	-	0.0004	20.0	0.2	0.0034	17.0	0.0	2.5	2	0	0	2	2	2	1	MarR	family
HTH_IclR	PF09339.5	gi|568164089|ref|YP_008947536.1|	-	0.00098	18.6	0.0	0.0025	17.3	0.0	1.6	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
DUF2250	PF10007.4	gi|568164089|ref|YP_008947536.1|	-	0.0019	18.0	1.1	0.0019	18.0	0.8	2.2	2	0	0	2	2	2	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Penicillinase_R	PF03965.11	gi|568164089|ref|YP_008947536.1|	-	0.0035	17.3	0.4	0.38	10.8	0.0	2.9	3	0	0	3	3	3	1	Penicillinase	repressor
tRNA-synt_2b	PF00587.20	gi|568164089|ref|YP_008947536.1|	-	0.006	16.1	0.7	0.044	13.3	0.5	2.5	1	1	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
MarR_2	PF12802.2	gi|568164089|ref|YP_008947536.1|	-	0.0077	15.8	2.3	0.024	14.3	0.0	2.9	3	0	0	3	3	3	1	MarR	family
FeoC	PF09012.5	gi|568164089|ref|YP_008947536.1|	-	0.0084	15.7	0.1	0.023	14.3	0.1	1.7	1	0	0	1	1	1	1	FeoC	like	transcriptional	regulator
HTH_20	PF12840.2	gi|568164089|ref|YP_008947536.1|	-	0.017	14.8	0.1	0.094	12.5	0.0	2.4	2	0	0	2	2	2	0	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|568164089|ref|YP_008947536.1|	-	0.14	12.3	0.1	0.49	10.5	0.0	1.9	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_36	PF13730.1	gi|568164089|ref|YP_008947536.1|	-	0.14	12.3	1.9	0.55	10.3	1.0	2.2	2	0	0	2	2	2	0	Helix-turn-helix	domain
Lactamase_B_3	PF13483.1	gi|568164090|ref|YP_008947537.1|	-	3.1e-18	66.0	0.0	4.5e-18	65.4	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.2	gi|568164090|ref|YP_008947537.1|	-	3.1e-15	56.2	0.1	4.2e-15	55.7	0.1	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|568164090|ref|YP_008947537.1|	-	2.4e-10	40.3	0.3	3.4e-10	39.8	0.2	1.2	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Peptidase_M24	PF00557.19	gi|568164091|ref|YP_008947538.1|	-	6.9e-47	159.6	0.1	8.2e-47	159.4	0.0	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Y_phosphatase2	PF03162.8	gi|568164091|ref|YP_008947538.1|	-	0.12	11.6	0.0	0.2	10.9	0.0	1.2	1	0	0	1	1	1	0	Tyrosine	phosphatase	family
DUF3972	PF13118.1	gi|568164091|ref|YP_008947538.1|	-	0.14	12.2	0.8	0.58	10.2	0.3	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3972)
DUF1512	PF07431.7	gi|568164092|ref|YP_008947539.1|	-	7.1e-132	439.4	10.1	8.6e-132	439.1	7.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1512)
UBACT	PF02134.16	gi|568164092|ref|YP_008947539.1|	-	0.18	11.3	0.1	0.18	11.3	0.1	2.2	3	0	0	3	3	3	0	Repeat	in	ubiquitin-activating	(UBA)	protein
HD	PF01966.17	gi|568164093|ref|YP_008947541.1|	-	2e-09	37.5	0.2	8.5e-09	35.4	0.1	2.0	2	0	0	2	2	2	1	HD	domain
Hydrolase_3	PF08282.7	gi|568164094|ref|YP_008947542.1|	-	6.1e-27	94.8	0.2	2.5e-14	53.4	0.1	2.0	1	1	0	2	2	2	2	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.2	gi|568164094|ref|YP_008947542.1|	-	1.1e-07	32.2	4.6	3.1e-07	30.7	0.0	2.3	1	1	1	2	2	2	1	haloacid	dehalogenase-like	hydrolase
S6PP	PF05116.8	gi|568164094|ref|YP_008947542.1|	-	5.2e-06	25.9	0.1	0.00088	18.6	0.0	2.1	2	0	0	2	2	2	2	Sucrose-6F-phosphate	phosphohydrolase
Hydrolase	PF00702.21	gi|568164094|ref|YP_008947542.1|	-	6.4e-06	26.7	1.2	0.0003	21.2	0.0	2.7	1	1	1	2	2	2	1	haloacid	dehalogenase-like	hydrolase
HAD_2	PF13419.1	gi|568164094|ref|YP_008947542.1|	-	4.9e-05	23.6	0.1	0.52	10.5	0.0	2.7	2	1	1	3	3	3	2	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|568164094|ref|YP_008947542.1|	-	0.0074	15.9	0.0	0.013	15.2	0.0	1.3	1	0	0	1	1	1	1	HAD-hyrolase-like
Hydrolase_6	PF13344.1	gi|568164094|ref|YP_008947542.1|	-	0.018	14.9	0.1	0.046	13.6	0.0	1.8	2	0	0	2	2	2	0	Haloacid	dehalogenase-like	hydrolase
tRNA-synt_1c	PF00749.16	gi|568164095|ref|YP_008947543.1|	-	5.1e-80	268.4	0.1	4.3e-79	265.4	0.0	2.1	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
tRNA-synt_1c_C	PF03950.13	gi|568164095|ref|YP_008947543.1|	-	9e-23	80.8	0.0	1.7e-22	79.9	0.0	1.5	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(E	and	Q),	anti-codon	binding	domain
DUF1869	PF08956.5	gi|568164095|ref|YP_008947543.1|	-	0.002	17.6	0.6	0.31	10.6	0.0	2.5	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF1869)
tRNA-synt_1d	PF00750.14	gi|568164095|ref|YP_008947543.1|	-	0.064	12.0	0.1	0.18	10.5	0.0	1.7	1	1	1	2	2	2	0	tRNA	synthetases	class	I	(R)
Ribosomal_L7Ae	PF01248.21	gi|568164096|ref|YP_008947544.1|	-	2.8e-33	113.2	1.8	3.4e-33	113.0	1.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
PELOTA_1	PF15608.1	gi|568164096|ref|YP_008947544.1|	-	0.00013	21.6	0.1	0.00019	21.1	0.0	1.2	1	0	0	1	1	1	1	PELOTA	RNA	binding	domain
RNase_P_pop3	PF08228.6	gi|568164096|ref|YP_008947544.1|	-	0.00042	20.1	0.1	0.00048	19.9	0.1	1.1	1	0	0	1	1	1	1	RNase	P	subunit	Pop3
DbpA	PF03880.10	gi|568164096|ref|YP_008947544.1|	-	0.028	14.0	0.4	0.35	10.5	0.1	2.7	3	1	0	3	3	3	0	DbpA	RNA	binding	domain
DUF1269	PF06897.7	gi|568164096|ref|YP_008947544.1|	-	0.079	12.9	1.0	16	5.5	0.1	2.5	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1269)
eRF1_3	PF03465.10	gi|568164096|ref|YP_008947544.1|	-	0.11	12.7	0.3	0.15	12.2	0.2	1.3	1	1	0	1	1	1	0	eRF1	domain	3
SSV1_ORF_D-335	PF07935.6	gi|568164097|ref|YP_008947545.1|	-	2e-06	27.4	0.0	2.2e-06	27.3	0.0	1.1	1	0	0	1	1	1	1	ORF	D-335-like	protein
Clr5	PF14420.1	gi|568164097|ref|YP_008947545.1|	-	0.077	12.8	0.2	0.095	12.6	0.2	1.1	1	0	0	1	1	1	0	Clr5	domain
ABC_tran	PF00005.22	gi|568164098|ref|YP_008947547.1|	-	6.8e-34	117.1	0.0	1.2e-33	116.3	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|568164098|ref|YP_008947547.1|	-	4.3e-14	53.1	4.3	2.5e-06	27.6	0.8	2.1	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|568164098|ref|YP_008947547.1|	-	0.0001	21.5	0.1	0.06	12.5	0.0	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|568164098|ref|YP_008947547.1|	-	0.00013	21.1	3.0	0.017	14.2	0.2	2.2	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA_29	PF13555.1	gi|568164098|ref|YP_008947547.1|	-	0.00049	19.5	0.0	0.00091	18.7	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|568164098|ref|YP_008947547.1|	-	0.001	19.4	0.7	0.0019	18.5	0.5	1.7	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|568164098|ref|YP_008947547.1|	-	0.0035	17.5	0.2	0.012	15.8	0.1	2.1	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DUF3584	PF12128.3	gi|568164098|ref|YP_008947547.1|	-	0.0065	13.8	0.0	0.0089	13.4	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3584)
NTPase_1	PF03266.10	gi|568164098|ref|YP_008947547.1|	-	0.01	15.5	0.3	0.033	13.9	0.2	2.0	1	1	0	1	1	1	0	NTPase
AAA_19	PF13245.1	gi|568164098|ref|YP_008947547.1|	-	0.012	15.3	0.1	0.029	14.0	0.1	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
SRP54	PF00448.17	gi|568164098|ref|YP_008947547.1|	-	0.021	14.3	0.7	0.038	13.4	0.1	1.7	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
AAA_28	PF13521.1	gi|568164098|ref|YP_008947547.1|	-	0.024	14.5	0.1	0.046	13.6	0.1	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_17	PF13207.1	gi|568164098|ref|YP_008947547.1|	-	0.03	15.1	0.1	0.069	13.9	0.1	1.8	2	1	0	2	2	1	0	AAA	domain
AAA_30	PF13604.1	gi|568164098|ref|YP_008947547.1|	-	0.046	13.2	0.0	0.1	12.1	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_18	PF13238.1	gi|568164098|ref|YP_008947547.1|	-	0.068	13.4	1.0	0.16	12.3	0.7	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_14	PF13173.1	gi|568164098|ref|YP_008947547.1|	-	0.074	12.9	0.0	0.2	11.5	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.7	gi|568164098|ref|YP_008947547.1|	-	0.077	12.0	0.0	0.15	11.1	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
AAA_22	PF13401.1	gi|568164098|ref|YP_008947547.1|	-	0.087	12.9	0.5	0.27	11.3	0.3	1.8	1	1	0	1	1	1	0	AAA	domain
PhoH	PF02562.11	gi|568164098|ref|YP_008947547.1|	-	0.091	11.9	0.0	0.27	10.4	0.0	1.7	2	0	0	2	2	2	0	PhoH-like	protein
AAA_5	PF07728.9	gi|568164098|ref|YP_008947547.1|	-	0.1	12.3	0.9	0.66	9.7	0.1	2.1	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.1	gi|568164098|ref|YP_008947547.1|	-	0.1	12.5	0.2	0.21	11.5	0.1	1.7	1	1	0	1	1	1	0	AAA	ATPase	domain
Mg_chelatase	PF01078.16	gi|568164098|ref|YP_008947547.1|	-	0.12	11.4	0.1	0.36	9.9	0.0	1.7	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
DNA_pol_B	PF00136.16	gi|568164099|ref|YP_008947548.1|	-	1.6e-95	320.6	5.9	1.6e-95	320.6	4.1	1.5	2	0	0	2	2	2	1	DNA	polymerase	family	B
DNA_pol_B_exo1	PF03104.14	gi|568164099|ref|YP_008947548.1|	-	6.8e-35	120.4	2.2	2.2e-34	118.7	1.5	1.9	1	1	0	1	1	1	1	DNA	polymerase	family	B,	exonuclease	domain
RNase_H_2	PF13482.1	gi|568164099|ref|YP_008947548.1|	-	1.4e-06	28.2	2.7	6.7e-06	26.0	0.1	3.4	4	1	0	4	4	4	1	RNase_H	superfamily
DNA_pol_B_exo2	PF10108.4	gi|568164099|ref|YP_008947548.1|	-	7.8e-06	25.5	0.0	2e-05	24.2	0.0	1.6	1	0	0	1	1	1	1	Predicted	3'-5'	exonuclease	related	to	the	exonuclease	domain	of	PolB
DUF2286	PF10051.4	gi|568164100|ref|YP_008947549.1|	-	3.7e-56	188.7	4.5	4.3e-56	188.4	3.1	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2286)
DUF1626	PF07788.6	gi|568164100|ref|YP_008947549.1|	-	0.079	12.7	0.0	0.16	11.7	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1626)
Plasmid_parti	PF01672.11	gi|568164100|ref|YP_008947549.1|	-	0.095	13.1	0.1	0.16	12.3	0.1	1.4	1	0	0	1	1	1	0	Putative	plasmid	partition	protein
DOT1	PF08123.8	gi|568164101|ref|YP_008947550.1|	-	2.6e-08	33.4	0.1	3.4e-07	29.7	0.1	2.0	1	1	0	1	1	1	1	Histone	methylation	protein	DOT1
Methyltransf_31	PF13847.1	gi|568164101|ref|YP_008947550.1|	-	8.7e-07	28.6	0.2	1.6e-06	27.8	0.1	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|568164101|ref|YP_008947550.1|	-	1.3e-06	28.9	0.0	2.2e-06	28.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|568164101|ref|YP_008947550.1|	-	1.1e-05	24.8	0.0	1.4e-05	24.5	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_4	PF02390.12	gi|568164101|ref|YP_008947550.1|	-	2.1e-05	23.6	0.0	2.5e-05	23.3	0.0	1.2	1	0	0	1	1	1	1	Putative	methyltransferase
PrmA	PF06325.8	gi|568164101|ref|YP_008947550.1|	-	4.1e-05	22.8	0.1	5.3e-05	22.4	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_25	PF13649.1	gi|568164101|ref|YP_008947550.1|	-	5.6e-05	23.4	0.0	8.1e-05	22.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|568164101|ref|YP_008947550.1|	-	0.00017	21.6	0.0	0.00028	20.9	0.0	1.4	2	0	0	2	2	1	1	Methyltransferase	domain
CMAS	PF02353.15	gi|568164101|ref|YP_008947550.1|	-	0.0011	18.0	0.0	0.0015	17.6	0.0	1.1	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_11	PF08241.7	gi|568164101|ref|YP_008947550.1|	-	0.0022	18.4	0.0	0.0041	17.5	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|568164101|ref|YP_008947550.1|	-	0.0031	17.0	0.0	0.0033	16.9	0.0	1.2	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
N6_Mtase	PF02384.11	gi|568164101|ref|YP_008947550.1|	-	0.0044	16.1	0.0	0.0056	15.8	0.0	1.2	1	0	0	1	1	1	1	N-6	DNA	Methylase
Methyltransf_12	PF08242.7	gi|568164101|ref|YP_008947550.1|	-	0.0046	17.3	0.1	0.011	16.1	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
TehB	PF03848.9	gi|568164101|ref|YP_008947550.1|	-	0.0047	16.1	0.0	0.0063	15.6	0.0	1.2	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
Methyltransf_32	PF13679.1	gi|568164101|ref|YP_008947550.1|	-	0.025	14.2	0.0	0.029	14.0	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
RrnaAD	PF00398.15	gi|568164101|ref|YP_008947550.1|	-	0.029	13.3	0.1	0.036	13.0	0.1	1.3	1	1	0	1	1	1	0	Ribosomal	RNA	adenine	dimethylase
DUF633	PF04816.7	gi|568164101|ref|YP_008947550.1|	-	0.035	13.4	0.1	0.13	11.6	0.0	1.7	1	1	1	2	2	2	0	Family	of	unknown	function	(DUF633)
Met_10	PF02475.11	gi|568164101|ref|YP_008947550.1|	-	0.057	12.9	0.1	0.065	12.8	0.0	1.2	1	0	0	1	1	1	0	Met-10+	like-protein
MetW	PF07021.7	gi|568164101|ref|YP_008947550.1|	-	0.074	12.4	0.0	0.086	12.2	0.0	1.3	1	0	0	1	1	1	0	Methionine	biosynthesis	protein	MetW
tRNA_U5-meth_tr	PF05958.6	gi|568164101|ref|YP_008947550.1|	-	0.088	11.4	0.0	0.12	10.9	0.0	1.1	1	0	0	1	1	1	0	tRNA	(Uracil-5-)-methyltransferase
UPF0020	PF01170.13	gi|568164101|ref|YP_008947550.1|	-	0.1	12.1	0.0	0.15	11.6	0.0	1.2	1	0	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
Methyltransf_23	PF13489.1	gi|568164101|ref|YP_008947550.1|	-	0.12	12.1	0.0	0.17	11.5	0.0	1.4	1	1	0	1	1	1	0	Methyltransferase	domain
CDP-OH_P_transf	PF01066.16	gi|568164103|ref|YP_008947552.1|	-	8.7e-12	45.2	13.3	4.3e-11	43.0	9.2	2.0	1	1	0	1	1	1	1	CDP-alcohol	phosphatidyltransferase
DUF912	PF06024.7	gi|568164103|ref|YP_008947552.1|	-	6.8	6.7	10.1	0.85	9.7	2.1	2.2	2	0	0	2	2	2	0	Nucleopolyhedrovirus	protein	of	unknown	function	(DUF912)
DNA_primase_lrg	PF04104.9	gi|568164104|ref|YP_008947553.1|	-	4.5e-05	22.8	3.4	0.00087	18.6	0.3	3.1	1	1	1	2	2	2	2	Eukaryotic	and	archaeal	DNA	primase,	large	subunit
DUF1456	PF07308.8	gi|568164104|ref|YP_008947553.1|	-	0.0035	17.3	1.2	4.6	7.3	0.1	3.2	3	0	0	3	3	3	2	Protein	of	unknown	function	(DUF1456)
tRNA-synt_1g	PF09334.6	gi|568164105|ref|YP_008947554.1|	-	6.1e-146	486.0	0.0	7.3e-146	485.7	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(M)
tRNA-synt_1	PF00133.17	gi|568164105|ref|YP_008947554.1|	-	5.1e-12	44.5	0.2	1.8e-05	22.9	0.0	3.0	2	1	1	3	3	3	2	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|568164105|ref|YP_008947554.1|	-	7e-05	22.6	0.0	0.00015	21.5	0.0	1.5	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
DZR	PF12773.2	gi|568164105|ref|YP_008947554.1|	-	0.035	13.9	2.9	0.081	12.7	2.0	1.6	1	0	0	1	1	1	0	Double	zinc	ribbon
UPF0547	PF10571.4	gi|568164105|ref|YP_008947554.1|	-	0.91	9.2	5.0	13	5.5	0.2	2.5	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zf-ribbon_3	PF13248.1	gi|568164105|ref|YP_008947554.1|	-	0.99	8.7	6.7	44	3.4	4.6	2.5	1	1	0	1	1	1	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|568164105|ref|YP_008947554.1|	-	2.9	7.5	5.7	5.5	6.6	0.1	2.7	2	0	0	2	2	2	0	zinc-ribbon	domain
V_ATPase_I	PF01496.14	gi|568164106|ref|YP_008947555.1|	-	1.7e-57	194.8	23.3	2.6e-56	190.9	16.1	2.5	1	1	0	1	1	1	1	V-type	ATPase	116kDa	subunit	family
DUF3450	PF11932.3	gi|568164106|ref|YP_008947555.1|	-	0.037	13.2	0.1	0.063	12.5	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3450)
DUF4200	PF13863.1	gi|568164106|ref|YP_008947555.1|	-	0.23	11.4	9.3	0.32	10.9	2.0	2.9	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4200)
ATP-synt_F	PF01990.12	gi|568164107|ref|YP_008947556.1|	-	2.8e-16	59.6	0.3	3e-16	59.5	0.2	1.0	1	0	0	1	1	1	1	ATP	synthase	(F/14-kDa)	subunit
DRTGG	PF07085.7	gi|568164107|ref|YP_008947556.1|	-	0.06	12.9	0.1	0.11	12.0	0.1	1.5	1	1	1	2	2	2	0	DRTGG	domain
vATP-synt_E	PF01991.13	gi|568164108|ref|YP_008947557.1|	-	9.1e-11	41.4	14.2	1.5e-10	40.6	4.2	2.2	1	1	1	2	2	2	2	ATP	synthase	(E/31	kDa)	subunit
DUF1657	PF07870.6	gi|568164108|ref|YP_008947557.1|	-	0.13	11.9	4.8	2	8.1	0.0	3.4	5	0	0	5	5	5	0	Protein	of	unknown	function	(DUF1657)
ADSL_C	PF10397.4	gi|568164108|ref|YP_008947557.1|	-	0.14	12.1	1.5	6.8	6.7	0.2	3.1	2	1	1	3	3	3	0	Adenylosuccinate	lyase	C-terminus
Lipase_GDSL_3	PF14606.1	gi|568164108|ref|YP_008947557.1|	-	0.16	11.6	1.6	0.22	11.2	0.6	1.6	1	1	0	1	1	1	0	GDSL-like	Lipase/Acylhydrolase	family
DUF3853	PF12964.2	gi|568164108|ref|YP_008947557.1|	-	0.74	9.6	3.8	7.6	6.4	0.0	2.5	2	1	0	3	3	3	0	Protein	of	unknown	function	(DUF3853)
DUF445	PF04286.7	gi|568164108|ref|YP_008947557.1|	-	0.84	9.1	8.9	3.3	7.1	6.2	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF445)
DinI	PF06183.8	gi|568164108|ref|YP_008947557.1|	-	1.3	9.0	7.9	19	5.3	0.4	3.9	2	2	3	5	5	5	0	DinI-like	family
DUF2935	PF11155.3	gi|568164108|ref|YP_008947557.1|	-	2.5	8.1	6.5	31	4.6	3.7	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF2935)
ATP-synt_ab	PF00006.20	gi|568164109|ref|YP_008947558.1|	-	1.7e-89	298.9	0.0	2.4e-89	298.5	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_C	PF00306.22	gi|568164109|ref|YP_008947558.1|	-	2.1e-18	66.8	1.3	3.8e-18	66.0	0.9	1.3	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	chain,	C	terminal	domain
ATP-synt_ab_N	PF02874.18	gi|568164109|ref|YP_008947558.1|	-	2.2e-11	43.7	1.7	2.2e-11	43.7	1.1	2.3	2	0	0	2	2	2	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
AAA_22	PF13401.1	gi|568164109|ref|YP_008947558.1|	-	0.011	15.8	1.1	0.028	14.5	0.0	2.2	2	2	0	2	2	2	0	AAA	domain
PDZ	PF00595.19	gi|568164109|ref|YP_008947558.1|	-	0.08	13.1	0.1	0.48	10.6	0.1	2.2	2	0	0	2	2	2	0	PDZ	domain	(Also	known	as	DHR	or	GLGF)
Esterase	PF00756.15	gi|568164109|ref|YP_008947558.1|	-	0.15	11.4	1.6	2.7	7.3	0.8	2.6	2	1	0	2	2	2	0	Putative	esterase
SRP54	PF00448.17	gi|568164109|ref|YP_008947558.1|	-	0.17	11.3	0.1	12	5.2	0.0	3.0	3	0	0	3	3	3	0	SRP54-type	protein,	GTPase	domain
Peptidase_M23	PF01551.17	gi|568164109|ref|YP_008947558.1|	-	0.17	11.9	0.0	2.6	8.1	0.0	2.3	2	0	0	2	2	2	0	Peptidase	family	M23
ATP-synt_ab	PF00006.20	gi|568164110|ref|YP_008947559.1|	-	6.6e-58	195.7	0.0	8.8e-58	195.3	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_C	PF00306.22	gi|568164110|ref|YP_008947559.1|	-	1.7e-12	47.8	0.0	3.4e-12	46.8	0.0	1.5	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	chain,	C	terminal	domain
ATP-synt_ab_N	PF02874.18	gi|568164110|ref|YP_008947559.1|	-	5.6e-10	39.2	0.6	1.1e-09	38.3	0.4	1.6	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
HAS-barrel	PF09378.5	gi|568164110|ref|YP_008947559.1|	-	0.0012	18.7	0.3	0.003	17.4	0.2	1.7	1	0	0	1	1	1	1	HAS	barrel	domain
PipA	PF07108.6	gi|568164110|ref|YP_008947559.1|	-	0.12	11.7	0.0	0.23	10.8	0.0	1.4	1	0	0	1	1	1	0	PipA	protein
ATP-synt_D	PF01813.12	gi|568164111|ref|YP_008947560.1|	-	1.4e-49	168.3	3.2	1.5e-49	168.1	2.2	1.0	1	0	0	1	1	1	1	ATP	synthase	subunit	D
MAGE	PF01454.14	gi|568164111|ref|YP_008947560.1|	-	0.0015	17.9	0.0	0.0024	17.2	0.0	1.4	1	1	0	1	1	1	1	MAGE	family
ING	PF12998.2	gi|568164111|ref|YP_008947560.1|	-	0.22	11.7	2.8	0.63	10.3	0.1	2.4	2	1	0	2	2	2	0	Inhibitor	of	growth	proteins	N-terminal	histone-binding
ATP-synt_E_2	PF08112.6	gi|568164112|ref|YP_008947561.1|	-	7.5e-16	57.9	8.2	7.9e-16	57.8	5.7	1.0	1	0	0	1	1	1	1	ATP	synthase	epsilon	subunit
ATP-synt_B	PF00430.13	gi|568164112|ref|YP_008947561.1|	-	0.0037	17.0	2.6	0.0039	17.0	1.8	1.0	1	0	0	1	1	1	1	ATP	synthase	B/B'	CF(0)
Spore_GerAC	PF05504.6	gi|568164112|ref|YP_008947561.1|	-	0.034	13.9	2.0	0.035	13.8	1.4	1.1	1	0	0	1	1	1	0	Spore	germination	B3/	GerAC	like,	C-terminal
DUF3144	PF11342.3	gi|568164112|ref|YP_008947561.1|	-	0.042	13.9	0.3	0.05	13.6	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3144)
FliG_M	PF14841.1	gi|568164112|ref|YP_008947561.1|	-	0.042	13.8	0.2	0.047	13.6	0.1	1.2	1	0	0	1	1	1	0	FliG	middle	domain
LMP	PF04778.7	gi|568164112|ref|YP_008947561.1|	-	0.055	13.2	2.0	0.056	13.1	1.4	1.0	1	0	0	1	1	1	0	LMP	repeated	region
HALZ	PF02183.13	gi|568164112|ref|YP_008947561.1|	-	0.065	12.9	2.3	0.14	11.8	0.4	2.1	1	1	0	2	2	2	0	Homeobox	associated	leucine	zipper
HSCB_C	PF07743.8	gi|568164112|ref|YP_008947561.1|	-	0.14	12.6	1.1	0.17	12.3	0.7	1.4	1	1	0	1	1	1	0	HSCB	C-terminal	oligomerisation	domain
ACCA	PF03255.9	gi|568164112|ref|YP_008947561.1|	-	0.22	11.0	1.1	0.25	10.8	0.8	1.1	1	0	0	1	1	1	0	Acetyl	co-enzyme	A	carboxylase	carboxyltransferase	alpha	subunit
Nbl1_Borealin_N	PF10444.4	gi|568164112|ref|YP_008947561.1|	-	0.38	10.1	2.3	2	7.8	0.3	2.0	1	1	1	2	2	2	0	Nbl1	/	Borealin	N	terminal
ATP-synt_C	PF00137.16	gi|568164113|ref|YP_008947562.1|	-	3.7e-16	58.7	20.9	3.7e-16	58.7	14.5	2.0	1	1	0	2	2	2	1	ATP	synthase	subunit	C
Yip1	PF04893.12	gi|568164113|ref|YP_008947562.1|	-	6.7	6.1	13.5	7.9	5.9	9.4	1.1	1	0	0	1	1	1	0	Yip1	domain
tRNA-synt_2b	PF00587.20	gi|568164114|ref|YP_008947563.1|	-	6.9e-26	90.8	1.7	8.4e-26	90.5	0.4	1.7	2	0	0	2	2	2	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|568164114|ref|YP_008947563.1|	-	1.1e-18	66.9	0.4	3e-18	65.5	0.3	1.8	1	0	0	1	1	1	1	Anticodon	binding	domain
ProRS-C_1	PF09180.6	gi|568164114|ref|YP_008947563.1|	-	2.2e-18	65.9	1.3	3.1e-18	65.4	0.3	1.8	2	0	0	2	2	2	1	Prolyl-tRNA	synthetase,	C-terminal
Ribosomal_S26e	PF01283.14	gi|568164115|ref|YP_008947564.1|	-	1.2e-29	102.8	2.5	1.3e-29	102.7	1.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S26e
zf-dskA_traR	PF01258.12	gi|568164115|ref|YP_008947564.1|	-	0.017	14.8	5.3	0.05	13.3	0.3	2.3	2	0	0	2	2	2	0	Prokaryotic	dksA/traR	C4-type	zinc	finger
DUF2116	PF09889.4	gi|568164115|ref|YP_008947564.1|	-	0.068	12.9	0.7	0.068	12.9	0.5	2.1	3	0	0	3	3	3	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
Cys_rich_CWC	PF14375.1	gi|568164115|ref|YP_008947564.1|	-	0.13	12.1	2.1	0.23	11.3	1.4	1.5	1	1	0	1	1	1	0	Cysteine-rich	CWC
Yippee-Mis18	PF03226.9	gi|568164115|ref|YP_008947564.1|	-	0.21	11.6	2.6	6.1	6.9	2.1	2.0	1	1	1	2	2	2	0	Yippee	zinc-binding/DNA-binding	/Mis18,	centromere	assembly
DZR	PF12773.2	gi|568164115|ref|YP_008947564.1|	-	0.23	11.2	5.8	1.3	8.8	4.0	2.0	1	1	0	1	1	1	0	Double	zinc	ribbon
HECT_2	PF09814.4	gi|568164115|ref|YP_008947564.1|	-	0.27	9.9	1.2	0.8	8.3	0.1	1.8	1	1	1	2	2	2	0	HECT-like	Ubiquitin-conjugating	enzyme	(E2)-binding
Auto_anti-p27	PF06677.7	gi|568164115|ref|YP_008947564.1|	-	0.32	10.8	3.2	8.2	6.2	0.2	2.5	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
SOR_SNZ	PF01680.12	gi|568164116|ref|YP_008947565.1|	-	1.4e-96	322.1	2.4	1.9e-96	321.6	1.6	1.2	1	0	0	1	1	1	1	SOR/SNZ	family
ThiG	PF05690.9	gi|568164116|ref|YP_008947565.1|	-	5.8e-06	25.5	3.7	3e-05	23.2	0.1	2.5	3	0	0	3	3	3	1	Thiazole	biosynthesis	protein	ThiG
IGPS	PF00218.16	gi|568164116|ref|YP_008947565.1|	-	0.0017	17.4	0.0	0.044	12.8	0.0	2.2	2	0	0	2	2	2	1	Indole-3-glycerol	phosphate	synthase
NMO	PF03060.10	gi|568164116|ref|YP_008947565.1|	-	0.0048	16.0	3.1	0.017	14.3	0.1	2.3	2	1	0	2	2	2	1	Nitronate	monooxygenase
NanE	PF04131.9	gi|568164116|ref|YP_008947565.1|	-	0.0051	15.8	0.1	0.13	11.1	0.0	2.3	2	0	0	2	2	2	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
OMPdecase	PF00215.19	gi|568164116|ref|YP_008947565.1|	-	0.013	14.9	0.2	2.7	7.3	0.0	2.5	2	1	1	3	3	3	0	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
Leu_Phe_trans	PF03588.9	gi|568164116|ref|YP_008947565.1|	-	0.016	14.3	0.0	0.033	13.3	0.0	1.5	1	0	0	1	1	1	0	Leucyl/phenylalanyl-tRNA	protein	transferase
Trp_syntA	PF00290.15	gi|568164116|ref|YP_008947565.1|	-	0.023	13.2	0.0	0.041	12.4	0.0	1.3	1	0	0	1	1	1	0	Tryptophan	synthase	alpha	chain
His_biosynth	PF00977.16	gi|568164116|ref|YP_008947565.1|	-	0.023	13.9	0.8	1.7	7.8	0.0	2.9	2	1	1	3	3	3	0	Histidine	biosynthesis	protein
Dus	PF01207.12	gi|568164116|ref|YP_008947565.1|	-	0.025	13.4	0.1	1.4	7.6	0.0	2.3	2	0	0	2	2	2	0	Dihydrouridine	synthase	(Dus)
SNO	PF01174.14	gi|568164117|ref|YP_008947566.1|	-	2.5e-48	164.1	0.1	2.8e-48	164.0	0.0	1.0	1	0	0	1	1	1	1	SNO	glutamine	amidotransferase	family
GATase_3	PF07685.9	gi|568164117|ref|YP_008947566.1|	-	4.4e-11	42.6	0.6	3e-10	39.9	0.4	2.3	1	1	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
GATase	PF00117.23	gi|568164117|ref|YP_008947566.1|	-	1.8e-06	27.5	0.4	1.9e-05	24.2	0.2	2.0	1	1	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_S51	PF03575.12	gi|568164117|ref|YP_008947566.1|	-	2.5e-06	27.3	0.0	3.2e-06	26.9	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	S51
DJ-1_PfpI	PF01965.19	gi|568164117|ref|YP_008947566.1|	-	0.018	14.5	0.0	0.023	14.1	0.0	1.3	1	0	0	1	1	1	0	DJ-1/PfpI	family
Peptidase_C26	PF07722.8	gi|568164117|ref|YP_008947566.1|	-	0.03	13.7	0.8	0.68	9.3	0.5	2.6	1	1	0	1	1	1	0	Peptidase	C26
DUF4066	PF13278.1	gi|568164117|ref|YP_008947566.1|	-	0.13	11.4	0.0	0.25	10.6	0.0	1.4	1	0	0	1	1	1	0	Putative	amidotransferase
T2SE	PF00437.15	gi|568164118|ref|YP_008947567.1|	-	8.3e-13	47.8	0.0	1.5e-12	47.0	0.0	1.4	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_17	PF13207.1	gi|568164118|ref|YP_008947567.1|	-	9.3e-05	23.2	0.1	0.00051	20.8	0.0	2.4	3	0	0	3	3	1	1	AAA	domain
AAA_18	PF13238.1	gi|568164118|ref|YP_008947567.1|	-	0.00049	20.4	0.2	0.0035	17.6	0.0	2.7	3	1	0	3	3	2	1	AAA	domain
AAA_22	PF13401.1	gi|568164118|ref|YP_008947567.1|	-	0.0013	18.8	0.1	0.025	14.6	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
Sigma54_activ_2	PF14532.1	gi|568164118|ref|YP_008947567.1|	-	0.0023	17.9	0.0	0.0082	16.1	0.0	1.9	1	1	1	2	2	2	1	Sigma-54	interaction	domain
AAA_16	PF13191.1	gi|568164118|ref|YP_008947567.1|	-	0.0025	17.8	0.0	0.029	14.3	0.0	2.5	3	0	0	3	3	2	1	AAA	ATPase	domain
AAA_14	PF13173.1	gi|568164118|ref|YP_008947567.1|	-	0.0025	17.7	0.5	0.49	10.2	0.0	3.3	3	1	0	3	3	3	1	AAA	domain
AAA_25	PF13481.1	gi|568164118|ref|YP_008947567.1|	-	0.0026	17.1	0.0	0.0065	15.8	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
RuvB_N	PF05496.7	gi|568164118|ref|YP_008947567.1|	-	0.0033	16.5	0.2	0.016	14.2	0.0	2.2	3	0	0	3	3	3	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_5	PF07728.9	gi|568164118|ref|YP_008947567.1|	-	0.0039	16.9	0.1	0.017	14.8	0.0	2.1	2	0	0	2	2	1	1	AAA	domain	(dynein-related	subfamily)
AAA	PF00004.24	gi|568164118|ref|YP_008947567.1|	-	0.0049	17.0	0.0	0.019	15.1	0.0	2.1	2	0	0	2	2	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
IstB_IS21	PF01695.12	gi|568164118|ref|YP_008947567.1|	-	0.0062	15.9	0.0	0.016	14.6	0.0	1.6	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
DnaB_C	PF03796.10	gi|568164118|ref|YP_008947567.1|	-	0.01	14.7	0.0	0.049	12.5	0.0	1.9	2	0	0	2	2	2	0	DnaB-like	helicase	C	terminal	domain
AAA_19	PF13245.1	gi|568164118|ref|YP_008947567.1|	-	0.013	15.2	0.0	0.031	14.0	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_33	PF13671.1	gi|568164118|ref|YP_008947567.1|	-	0.016	15.1	0.0	0.04	13.7	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|568164118|ref|YP_008947567.1|	-	0.016	14.6	0.0	0.029	13.8	0.0	1.4	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
NACHT	PF05729.7	gi|568164118|ref|YP_008947567.1|	-	0.018	14.6	0.2	0.057	13.0	0.0	1.9	2	0	0	2	2	2	0	NACHT	domain
AAA_28	PF13521.1	gi|568164118|ref|YP_008947567.1|	-	0.022	14.7	0.0	0.05	13.5	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
Lon_C	PF05362.8	gi|568164118|ref|YP_008947567.1|	-	0.023	14.0	0.1	0.074	12.3	0.0	1.8	1	1	1	2	2	2	0	Lon	protease	(S16)	C-terminal	proteolytic	domain
NTPase_1	PF03266.10	gi|568164118|ref|YP_008947567.1|	-	0.042	13.5	0.2	0.25	11.0	0.0	2.4	2	0	0	2	2	2	0	NTPase
Zeta_toxin	PF06414.7	gi|568164118|ref|YP_008947567.1|	-	0.044	12.8	0.0	0.084	11.9	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
Sigma54_activat	PF00158.21	gi|568164118|ref|YP_008947567.1|	-	0.046	13.1	0.0	0.12	11.8	0.0	1.6	1	0	0	1	1	1	0	Sigma-54	interaction	domain
SRP54	PF00448.17	gi|568164118|ref|YP_008947567.1|	-	0.054	12.9	0.0	0.1	12.0	0.0	1.4	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
PNK3P	PF08645.6	gi|568164118|ref|YP_008947567.1|	-	0.097	12.1	1.2	12	5.2	0.0	3.1	3	1	0	3	3	3	0	Polynucleotide	kinase	3	phosphatase
Mg_chelatase	PF01078.16	gi|568164118|ref|YP_008947567.1|	-	0.12	11.4	0.0	0.31	10.1	0.0	1.6	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
Hjc	PF01870.13	gi|568164119|ref|YP_008947568.1|	-	3.4e-25	87.4	0.2	4.5e-25	87.0	0.2	1.2	1	0	0	1	1	1	1	Archaeal	holliday	junction	resolvase	(hjc)
NERD	PF08378.6	gi|568164119|ref|YP_008947568.1|	-	0.052	13.8	0.0	0.065	13.4	0.0	1.2	1	0	0	1	1	1	0	Nuclease-related	domain
VRR_NUC	PF08774.6	gi|568164119|ref|YP_008947568.1|	-	0.062	13.3	0.0	0.096	12.7	0.0	1.3	1	0	0	1	1	1	0	VRR-NUC	domain
IlvN	PF07991.7	gi|568164120|ref|YP_008947569.1|	-	8.1e-71	236.7	0.0	1.3e-70	236.0	0.0	1.3	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
IlvC	PF01450.14	gi|568164120|ref|YP_008947569.1|	-	1.1e-44	151.8	1.4	1.7e-44	151.2	1.0	1.2	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
F420_oxidored	PF03807.12	gi|568164120|ref|YP_008947569.1|	-	2.8e-06	27.6	0.0	1e-05	25.8	0.0	1.9	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
2-Hacid_dh_C	PF02826.14	gi|568164120|ref|YP_008947569.1|	-	3e-06	26.5	0.0	6e-06	25.5	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_2	PF03446.10	gi|568164120|ref|YP_008947569.1|	-	2.5e-05	24.1	0.0	9.4e-05	22.3	0.0	1.9	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
AdoHcyase_NAD	PF00670.16	gi|568164120|ref|YP_008947569.1|	-	7.1e-05	22.6	0.0	0.00043	20.1	0.0	2.0	2	0	0	2	2	2	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
NAD_Gly3P_dh_N	PF01210.18	gi|568164120|ref|YP_008947569.1|	-	0.0024	17.6	0.0	2.6	7.7	0.0	2.5	2	0	0	2	2	2	2	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
ApbA	PF02558.11	gi|568164120|ref|YP_008947569.1|	-	0.032	13.6	0.0	0.067	12.6	0.0	1.6	1	1	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
Oxidored_nitro	PF00148.14	gi|568164120|ref|YP_008947569.1|	-	0.068	11.7	0.0	0.19	10.2	0.0	1.8	1	1	0	1	1	1	0	Nitrogenase	component	1	type	Oxidoreductase
ACT_5	PF13710.1	gi|568164121|ref|YP_008947570.1|	-	0.00027	20.6	0.0	0.00042	20.0	0.0	1.3	1	0	0	1	1	1	1	ACT	domain
TPP_enzyme_N	PF02776.13	gi|568164122|ref|YP_008947571.1|	-	2.6e-57	193.0	0.0	5.1e-56	188.8	0.0	2.3	2	1	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|568164122|ref|YP_008947571.1|	-	7.9e-47	158.6	0.0	7.3e-45	152.2	0.0	2.6	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.17	gi|568164122|ref|YP_008947571.1|	-	1.1e-35	122.3	0.0	4.2e-35	120.4	0.0	2.0	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	central	domain
POR_N	PF01855.14	gi|568164122|ref|YP_008947571.1|	-	6.1e-05	22.6	0.0	0.00012	21.7	0.0	1.4	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Acid_PPase	PF12689.2	gi|568164123|ref|YP_008947572.1|	-	2.4e-11	43.5	0.1	4.2e-11	42.7	0.1	1.4	1	1	0	1	1	1	1	Acid	Phosphatase
HAD_2	PF13419.1	gi|568164123|ref|YP_008947572.1|	-	0.0014	18.8	0.1	0.0042	17.3	0.0	1.7	1	1	1	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
NIF	PF03031.13	gi|568164123|ref|YP_008947572.1|	-	0.0019	17.8	1.2	0.0025	17.4	0.8	1.2	1	0	0	1	1	1	1	NLI	interacting	factor-like	phosphatase
Hydrolase	PF00702.21	gi|568164123|ref|YP_008947572.1|	-	0.0035	17.8	0.1	1.4	9.2	0.0	2.2	1	1	1	2	2	2	2	haloacid	dehalogenase-like	hydrolase
MMR_HSR1	PF01926.18	gi|568164124|ref|YP_008947573.1|	-	4.2e-16	58.9	0.5	5.8e-12	45.6	0.0	2.2	2	0	0	2	2	2	2	50S	ribosome-binding	GTPase
FeoB_N	PF02421.13	gi|568164124|ref|YP_008947573.1|	-	5.1e-09	35.5	0.2	0.00021	20.6	0.1	2.2	2	0	0	2	2	2	2	Ferrous	iron	transport	protein	B
DUF258	PF03193.11	gi|568164124|ref|YP_008947573.1|	-	4.3e-06	26.0	0.0	6.8e-06	25.3	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
Dynamin_N	PF00350.18	gi|568164124|ref|YP_008947573.1|	-	6e-06	26.1	1.5	0.018	14.8	0.0	2.9	2	1	1	3	3	3	2	Dynamin	family
GTP_EFTU	PF00009.22	gi|568164124|ref|YP_008947573.1|	-	0.00071	19.0	0.1	0.013	14.9	0.0	2.2	2	0	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
AAA_17	PF13207.1	gi|568164124|ref|YP_008947573.1|	-	0.00075	20.3	1.0	0.0056	17.4	0.2	2.5	2	1	0	2	2	2	1	AAA	domain
Miro	PF08477.8	gi|568164124|ref|YP_008947573.1|	-	0.013	15.9	0.0	0.043	14.3	0.0	1.8	2	0	0	2	2	2	0	Miro-like	protein
6PF2K	PF01591.13	gi|568164124|ref|YP_008947573.1|	-	0.023	13.8	1.6	14	4.6	0.0	3.3	2	1	0	3	3	3	0	6-phosphofructo-2-kinase
Arf	PF00025.16	gi|568164124|ref|YP_008947573.1|	-	0.03	13.5	0.2	0.47	9.6	0.0	2.2	1	1	1	2	2	2	0	ADP-ribosylation	factor	family
PduV-EutP	PF10662.4	gi|568164124|ref|YP_008947573.1|	-	0.043	13.3	0.1	0.56	9.6	0.0	2.1	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
CARDB	PF07705.6	gi|568164125|ref|YP_008947574.1|	-	0.00027	20.9	0.8	0.0041	17.1	0.1	2.4	2	0	0	2	2	2	1	CARDB
Phlebovirus_NSM	PF07246.6	gi|568164125|ref|YP_008947574.1|	-	0.1	11.7	0.0	0.15	11.2	0.0	1.2	1	0	0	1	1	1	0	Phlebovirus	nonstructural	protein	NS-M
UbiA	PF01040.13	gi|568164126|ref|YP_008947575.1|	-	4.8e-43	147.2	20.2	5.9e-43	146.9	14.0	1.0	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
CbtB	PF09489.5	gi|568164126|ref|YP_008947575.1|	-	6.9	6.6	11.4	2.7	7.9	0.1	4.5	4	1	1	5	5	5	0	Probable	cobalt	transporter	subunit	(CbtB)
Cdd1	PF11731.3	gi|568164127|ref|YP_008947576.1|	-	0.057	13.3	0.0	0.07	13.0	0.0	1.2	1	0	0	1	1	1	0	Pathogenicity	locus
DUF2067	PF09840.4	gi|568164127|ref|YP_008947576.1|	-	0.097	12.1	0.1	0.097	12.1	0.1	1.2	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2067)
DUF1803	PF08820.5	gi|568164127|ref|YP_008947576.1|	-	0.13	12.0	0.0	0.15	11.7	0.0	1.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF1803)
Pyr_redox_2	PF07992.9	gi|568164128|ref|YP_008947577.1|	-	0.0071	16.2	0.0	0.0093	15.8	0.0	1.3	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
AdoMet_dc	PF02675.10	gi|568164129|ref|YP_008947578.1|	-	4.3e-32	110.1	0.0	4.8e-32	110.0	0.0	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	decarboxylase
DUF211	PF02680.9	gi|568164130|ref|YP_008947579.1|	-	2.7e-35	120.0	5.5	2.9e-35	119.9	3.8	1.0	1	0	0	1	1	1	1	Uncharacterized	ArCR,	COG1888
ATP_bind_3	PF01171.15	gi|568164131|ref|YP_008947580.1|	-	3.1e-08	33.3	0.0	4.7e-08	32.7	0.0	1.3	1	0	0	1	1	1	1	PP-loop	family
NAD_synthase	PF02540.12	gi|568164131|ref|YP_008947580.1|	-	0.0033	16.3	0.0	0.0043	15.9	0.0	1.2	1	0	0	1	1	1	1	NAD	synthase
DUF2024	PF09630.5	gi|568164131|ref|YP_008947580.1|	-	0.15	11.8	1.5	1.4	8.6	0.0	2.7	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF2024)
Cob_adeno_trans	PF01923.13	gi|568164132|ref|YP_008947581.1|	-	1.3e-51	174.6	0.0	1.5e-51	174.4	0.0	1.0	1	0	0	1	1	1	1	Cobalamin	adenosyltransferase
Spectrin	PF00435.16	gi|568164132|ref|YP_008947581.1|	-	0.04	14.1	0.3	0.51	10.6	0.1	2.3	2	0	0	2	2	2	0	Spectrin	repeat
Ret_tiss	PF10044.4	gi|568164132|ref|YP_008947581.1|	-	0.12	12.9	0.2	1.8	9.1	0.0	2.1	2	0	0	2	2	2	0	Retinal	tissue	protein
Erp_C	PF06780.6	gi|568164132|ref|YP_008947581.1|	-	0.67	9.7	4.8	0.27	11.0	1.1	1.9	2	1	0	2	2	2	0	Erp	protein	C-terminus
tRNA-synt_1	PF00133.17	gi|568164133|ref|YP_008947582.1|	-	2.5e-54	184.3	0.0	3e-53	180.7	0.0	2.5	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|568164133|ref|YP_008947582.1|	-	2.5e-20	72.7	0.4	5.4e-20	71.7	0.3	1.6	1	0	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.6	gi|568164133|ref|YP_008947582.1|	-	1.8e-18	66.4	1.1	1.4e-11	43.7	0.0	3.7	3	1	1	4	4	4	2	tRNA	synthetases	class	I	(M)
tRNA-synt_1_2	PF13603.1	gi|568164133|ref|YP_008947582.1|	-	4.7e-13	48.8	0.0	9.9e-13	47.7	0.0	1.5	1	0	0	1	1	1	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1e	PF01406.14	gi|568164133|ref|YP_008947582.1|	-	3e-10	39.7	0.0	2.1e-08	33.6	0.0	2.6	2	1	0	2	2	2	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1f	PF01921.13	gi|568164133|ref|YP_008947582.1|	-	0.0061	15.2	0.0	0.016	13.8	0.0	1.8	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(K)
HisK_N	PF09385.5	gi|568164886|ref|YP_008947583.1|	-	0.0061	16.1	3.1	0.011	15.2	2.1	1.4	1	0	0	1	1	1	1	Histidine	kinase	N	terminal
GlutR_N	PF05201.10	gi|568164886|ref|YP_008947583.1|	-	0.014	14.9	0.4	0.42	10.1	0.0	2.1	1	1	1	2	2	2	0	Glutamyl-tRNAGlu	reductase,	N-terminal	domain
Penicillinase_R	PF03965.11	gi|568164886|ref|YP_008947583.1|	-	0.025	14.6	0.1	0.052	13.6	0.1	1.5	1	0	0	1	1	1	0	Penicillinase	repressor
HrcA_DNA-bdg	PF03444.10	gi|568164886|ref|YP_008947583.1|	-	0.026	13.9	1.5	0.039	13.3	0.3	1.9	2	0	0	2	2	2	0	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
Tho2	PF11262.3	gi|568164886|ref|YP_008947583.1|	-	0.038	13.0	1.1	0.043	12.8	0.6	1.3	1	1	0	1	1	1	0	Transcription	factor/nuclear	export	subunit	protein	2
HTH_32	PF13565.1	gi|568164886|ref|YP_008947583.1|	-	0.071	13.9	0.2	0.13	13.0	0.1	1.4	1	0	0	1	1	1	0	Homeodomain-like	domain
Aminotran_1_2	PF00155.16	gi|568164134|ref|YP_008947584.1|	-	1.1e-40	139.6	0.0	1.3e-40	139.5	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Beta_elim_lyase	PF01212.16	gi|568164134|ref|YP_008947584.1|	-	0.14	11.2	0.0	0.24	10.4	0.0	1.3	1	0	0	1	1	1	0	Beta-eliminating	lyase
HisG	PF01634.13	gi|568164135|ref|YP_008947585.1|	-	3e-53	179.7	0.1	4.5e-53	179.1	0.1	1.2	1	0	0	1	1	1	1	ATP	phosphoribosyltransferase
HisG_C	PF08029.6	gi|568164135|ref|YP_008947585.1|	-	5.4e-21	74.3	0.8	2e-20	72.5	0.2	2.1	2	0	0	2	2	2	1	HisG,	C-terminal	domain
His_biosynth	PF00977.16	gi|568164136|ref|YP_008947586.1|	-	3.1e-41	141.1	2.0	3.5e-41	140.9	1.4	1.0	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
PcrB	PF01884.12	gi|568164136|ref|YP_008947586.1|	-	4.6e-05	22.7	1.1	0.036	13.3	0.1	2.3	2	1	0	2	2	2	2	PcrB	family
IGPD	PF00475.13	gi|568164137|ref|YP_008947587.1|	-	9.9e-53	177.8	0.4	1.5e-52	177.3	0.2	1.2	1	0	0	1	1	1	1	Imidazoleglycerol-phosphate	dehydratase
His_biosynth	PF00977.16	gi|568164138|ref|YP_008947588.1|	-	4.5e-82	274.7	6.2	5.1e-82	274.5	4.3	1.0	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
PcrB	PF01884.12	gi|568164138|ref|YP_008947588.1|	-	0.00018	20.8	1.9	0.00049	19.4	0.3	2.2	2	1	1	3	3	3	1	PcrB	family
ThiG	PF05690.9	gi|568164138|ref|YP_008947588.1|	-	0.00023	20.3	1.9	0.0016	17.6	0.2	2.1	2	0	0	2	2	2	1	Thiazole	biosynthesis	protein	ThiG
TMP-TENI	PF02581.12	gi|568164138|ref|YP_008947588.1|	-	0.00036	19.6	0.5	0.22	10.5	0.1	2.2	2	0	0	2	2	2	2	Thiamine	monophosphate	synthase/TENI
NMO	PF03060.10	gi|568164138|ref|YP_008947588.1|	-	0.00037	19.7	1.6	0.3	10.1	0.1	2.1	2	0	0	2	2	2	2	Nitronate	monooxygenase
Dus	PF01207.12	gi|568164138|ref|YP_008947588.1|	-	0.0023	16.8	0.2	0.21	10.3	0.0	2.2	1	1	1	2	2	2	2	Dihydrouridine	synthase	(Dus)
DHO_dh	PF01180.16	gi|568164138|ref|YP_008947588.1|	-	0.048	12.6	2.1	0.86	8.5	0.1	2.2	2	0	0	2	2	2	0	Dihydroorotate	dehydrogenase
FMN_dh	PF01070.13	gi|568164138|ref|YP_008947588.1|	-	0.065	12.0	1.0	0.18	10.5	0.2	2.0	2	1	1	3	3	3	0	FMN-dependent	dehydrogenase
G3P_antiterm	PF04309.7	gi|568164138|ref|YP_008947588.1|	-	0.072	12.1	0.7	1.5	7.8	0.1	2.1	2	0	0	2	2	2	0	Glycerol-3-phosphate	responsive	antiterminator
Histidinol_dh	PF00815.15	gi|568164139|ref|YP_008947589.1|	-	7.8e-111	370.6	0.3	3e-110	368.6	0.2	1.7	1	1	0	1	1	1	1	Histidinol	dehydrogenase
StbA	PF06406.6	gi|568164139|ref|YP_008947589.1|	-	0.044	12.7	0.1	0.1	11.5	0.0	1.6	2	0	0	2	2	2	0	StbA	protein
PRA-PH	PF01503.12	gi|568164140|ref|YP_008947590.1|	-	2.3e-10	40.5	0.2	2.6e-10	40.4	0.1	1.1	1	0	0	1	1	1	1	Phosphoribosyl-ATP	pyrophosphohydrolase
GIT_SHD	PF08518.6	gi|568164140|ref|YP_008947590.1|	-	0.19	11.0	0.7	1.3	8.3	0.1	2.3	2	0	0	2	2	2	0	Spa2	homology	domain	(SHD)	of	GIT
GATase	PF00117.23	gi|568164141|ref|YP_008947591.1|	-	1.8e-27	96.0	0.0	2.2e-27	95.7	0.0	1.0	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
GATase_3	PF07685.9	gi|568164141|ref|YP_008947591.1|	-	0.019	14.5	0.1	0.041	13.4	0.0	1.5	2	0	0	2	2	2	0	CobB/CobQ-like	glutamine	amidotransferase	domain
PRA-CH	PF01502.13	gi|568164142|ref|YP_008947592.1|	-	4.9e-33	112.5	0.0	7.6e-33	111.9	0.0	1.3	1	0	0	1	1	1	1	Phosphoribosyl-AMP	cyclohydrolase
DUF3404	PF11884.3	gi|568164142|ref|YP_008947592.1|	-	0.056	12.3	0.0	0.058	12.2	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3404)
DUF59	PF01883.14	gi|568164143|ref|YP_008947593.1|	-	9.8e-18	63.9	0.2	1.4e-17	63.4	0.2	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF59
HTH_34	PF13601.1	gi|568164143|ref|YP_008947593.1|	-	0.096	12.7	0.0	0.2	11.6	0.0	1.5	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
tRNA-synt_2b	PF00587.20	gi|568164144|ref|YP_008947594.1|	-	8e-36	123.2	0.0	1.6e-35	122.2	0.0	1.5	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
Seryl_tRNA_N	PF02403.17	gi|568164144|ref|YP_008947594.1|	-	1.6e-25	89.2	12.6	3.1e-25	88.2	8.8	1.5	1	0	0	1	1	1	1	Seryl-tRNA	synthetase	N-terminal	domain
ALIX_LYPXL_bnd	PF13949.1	gi|568164144|ref|YP_008947594.1|	-	0.003	16.5	6.7	0.003	16.5	4.6	1.6	2	0	0	2	2	2	1	ALIX	V-shaped	domain	binding	to	HIV
Takusan	PF04822.8	gi|568164144|ref|YP_008947594.1|	-	0.018	14.7	2.6	0.03	14.0	0.6	2.2	2	0	0	2	2	2	0	Takusan
DUF2205	PF10224.4	gi|568164144|ref|YP_008947594.1|	-	0.078	12.5	7.0	0.1	12.1	3.7	2.1	1	1	0	1	1	1	0	Predicted	coiled-coil	protein	(DUF2205)
Rgp1	PF08737.5	gi|568164144|ref|YP_008947594.1|	-	0.087	11.8	2.0	0.13	11.2	1.4	1.2	1	0	0	1	1	1	0	Rgp1
XH	PF03469.9	gi|568164144|ref|YP_008947594.1|	-	0.13	11.8	4.5	0.28	10.8	3.1	1.5	1	0	0	1	1	1	0	XH	domain
DUF342	PF03961.8	gi|568164144|ref|YP_008947594.1|	-	1.2	7.4	6.2	2.3	6.5	4.3	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
Radical_SAM	PF04055.16	gi|568164145|ref|YP_008947595.1|	-	6.3e-17	62.2	0.0	4.1e-16	59.5	0.0	2.1	2	0	0	2	2	2	1	Radical	SAM	superfamily
B12-binding	PF02310.14	gi|568164145|ref|YP_008947595.1|	-	0.084	12.7	0.0	0.77	9.6	0.0	2.1	1	1	0	1	1	1	0	B12	binding	domain
RNA_POL_M_15KD	PF02150.11	gi|568164147|ref|YP_008947597.1|	-	2.8e-08	33.3	2.3	4.6e-08	32.6	1.6	1.4	1	0	0	1	1	1	1	RNA	polymerases	M/15	Kd	subunit
DUF2387	PF09526.5	gi|568164147|ref|YP_008947597.1|	-	3.9e-05	23.4	1.1	6.4e-05	22.8	0.7	1.5	1	0	0	1	1	1	1	Probable	metal-binding	protein	(DUF2387)
zf-TFIIB	PF13453.1	gi|568164147|ref|YP_008947597.1|	-	0.0033	16.5	1.0	0.007	15.5	0.7	1.6	1	0	0	1	1	1	1	Transcription	factor	zinc-finger
zf-NADH-PPase	PF09297.6	gi|568164147|ref|YP_008947597.1|	-	0.0051	16.2	0.7	0.016	14.7	0.0	1.9	2	0	0	2	2	2	1	NADH	pyrophosphatase	zinc	ribbon	domain
IBR	PF01485.16	gi|568164147|ref|YP_008947597.1|	-	0.0076	16.0	1.2	0.014	15.2	0.8	1.4	1	0	0	1	1	1	1	IBR	domain
OrfB_Zn_ribbon	PF07282.6	gi|568164147|ref|YP_008947597.1|	-	0.0083	15.7	0.9	0.016	14.8	0.6	1.5	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Cys_rich_CPCC	PF14206.1	gi|568164147|ref|YP_008947597.1|	-	0.0091	15.5	0.3	0.016	14.7	0.2	1.4	1	0	0	1	1	1	1	Cysteine-rich	CPCC
DUF1936	PF09151.5	gi|568164147|ref|YP_008947597.1|	-	0.033	13.7	3.0	0.31	10.5	0.8	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1936)
Zn_ribbon_recom	PF13408.1	gi|568164147|ref|YP_008947597.1|	-	0.057	13.6	2.5	0.11	12.7	1.8	1.6	1	1	0	1	1	1	0	Recombinase	zinc	beta	ribbon	domain
zf-ISL3	PF14690.1	gi|568164147|ref|YP_008947597.1|	-	0.061	13.3	2.7	3.1	7.9	0.2	2.2	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Nudix_N_2	PF14803.1	gi|568164147|ref|YP_008947597.1|	-	0.12	12.0	2.7	0.29	10.8	1.8	1.6	1	1	0	1	1	1	0	Nudix	N-terminal
zf-C4_Topoisom	PF01396.14	gi|568164147|ref|YP_008947597.1|	-	0.13	11.7	4.0	0.23	11.0	2.4	1.7	1	1	1	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
DRP	PF06044.7	gi|568164147|ref|YP_008947597.1|	-	0.2	10.5	2.4	0.39	9.6	1.1	1.7	1	1	1	2	2	2	0	Dam-replacing	family
DZR	PF12773.2	gi|568164147|ref|YP_008947597.1|	-	0.22	11.3	2.1	0.41	10.5	1.5	1.5	1	1	0	1	1	1	0	Double	zinc	ribbon
zinc_ribbon_2	PF13240.1	gi|568164147|ref|YP_008947597.1|	-	1	8.9	7.0	4.3	6.9	2.0	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|568164147|ref|YP_008947597.1|	-	2.4	7.9	5.0	6.5	6.5	0.1	2.9	3	0	0	3	3	3	0	zinc-ribbon	domain
zf-IS66	PF13005.2	gi|568164147|ref|YP_008947597.1|	-	8.1	6.5	7.5	2.5	8.1	2.2	2.4	2	1	0	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
AsnC_trans_reg	PF01037.16	gi|568164148|ref|YP_008947598.1|	-	2.5e-19	68.7	0.4	3.7e-19	68.2	0.3	1.3	1	0	0	1	1	1	1	AsnC	family
HTH_24	PF13412.1	gi|568164148|ref|YP_008947598.1|	-	9.8e-14	50.4	0.6	1.6e-12	46.6	0.4	2.3	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|568164148|ref|YP_008947598.1|	-	1.8e-11	43.4	1.0	6.3e-11	41.6	1.0	1.7	2	0	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
HTH_11	PF08279.7	gi|568164148|ref|YP_008947598.1|	-	2.2e-06	27.2	0.0	4e-06	26.3	0.0	1.5	1	0	0	1	1	1	1	HTH	domain
HTH_23	PF13384.1	gi|568164148|ref|YP_008947598.1|	-	0.00024	20.6	0.0	0.00042	19.8	0.0	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
MarR_2	PF12802.2	gi|568164148|ref|YP_008947598.1|	-	0.00033	20.2	0.1	0.00056	19.5	0.1	1.3	1	0	0	1	1	1	1	MarR	family
GntR	PF00392.16	gi|568164148|ref|YP_008947598.1|	-	0.00066	19.0	0.1	0.00099	18.5	0.1	1.2	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
TrmB	PF01978.14	gi|568164148|ref|YP_008947598.1|	-	0.00092	18.8	0.1	0.0018	17.9	0.1	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_28	PF13518.1	gi|568164148|ref|YP_008947598.1|	-	0.0011	18.8	0.0	0.002	18.1	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|568164148|ref|YP_008947598.1|	-	0.0012	18.6	0.1	0.0024	17.7	0.0	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_10	PF04967.7	gi|568164148|ref|YP_008947598.1|	-	0.002	17.6	0.0	0.0035	16.8	0.0	1.4	1	0	0	1	1	1	1	HTH	DNA	binding	domain
HTH_Tnp_ISL3	PF13542.1	gi|568164148|ref|YP_008947598.1|	-	0.0028	16.7	0.0	0.0053	15.8	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_DeoR	PF08220.7	gi|568164148|ref|YP_008947598.1|	-	0.0065	15.9	0.1	0.017	14.6	0.0	1.7	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
HTH_8	PF02954.14	gi|568164148|ref|YP_008947598.1|	-	0.0069	15.9	0.3	0.012	15.1	0.2	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	Fis	family
Rrf2	PF02082.15	gi|568164148|ref|YP_008947598.1|	-	0.0075	16.3	0.1	0.015	15.4	0.0	1.5	1	0	0	1	1	1	1	Transcriptional	regulator
MarR	PF01047.17	gi|568164148|ref|YP_008947598.1|	-	0.009	15.6	0.1	0.019	14.6	0.1	1.5	1	0	0	1	1	1	1	MarR	family
PCI	PF01399.22	gi|568164148|ref|YP_008947598.1|	-	0.013	15.7	0.1	0.039	14.2	0.0	1.7	2	0	0	2	2	2	0	PCI	domain
HTH_IclR	PF09339.5	gi|568164148|ref|YP_008947598.1|	-	0.019	14.5	0.1	0.028	14.0	0.1	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
NUMOD1	PF07453.8	gi|568164148|ref|YP_008947598.1|	-	0.02	14.7	0.1	6.9	6.6	0.0	3.3	3	0	0	3	3	3	0	NUMOD1	domain
HTH_Mga	PF08280.6	gi|568164148|ref|YP_008947598.1|	-	0.028	14.1	0.2	0.058	13.1	0.1	1.5	1	0	0	1	1	1	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_38	PF13936.1	gi|568164148|ref|YP_008947598.1|	-	0.028	13.9	0.1	0.054	13.0	0.1	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
B-block_TFIIIC	PF04182.7	gi|568164148|ref|YP_008947598.1|	-	0.036	13.8	0.0	0.087	12.6	0.0	1.7	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
HTH_27	PF13463.1	gi|568164148|ref|YP_008947598.1|	-	0.047	14.0	0.1	0.18	12.1	0.0	1.9	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
HTH_30	PF13556.1	gi|568164148|ref|YP_008947598.1|	-	0.051	13.1	0.1	0.088	12.4	0.0	1.3	1	0	0	1	1	1	0	PucR	C-terminal	helix-turn-helix	domain
LexA_DNA_bind	PF01726.11	gi|568164148|ref|YP_008947598.1|	-	0.069	12.7	0.0	0.14	11.7	0.0	1.4	1	0	0	1	1	1	0	LexA	DNA	binding	domain
Mga	PF05043.8	gi|568164148|ref|YP_008947598.1|	-	0.093	13.0	0.0	0.18	12.0	0.0	1.4	1	0	0	1	1	1	0	Mga	helix-turn-helix	domain
HTH_7	PF02796.10	gi|568164148|ref|YP_008947598.1|	-	0.094	12.5	0.0	0.31	10.9	0.0	1.9	1	1	1	2	2	2	0	Helix-turn-helix	domain	of	resolvase
TetR_C_9	PF14514.1	gi|568164148|ref|YP_008947598.1|	-	0.1	12.4	0.0	0.19	11.5	0.0	1.5	1	1	0	1	1	1	0	Transcriptional	regulator,	TetR,	C-terminal
HTH_psq	PF05225.11	gi|568164148|ref|YP_008947598.1|	-	0.1	12.1	0.0	0.17	11.4	0.0	1.3	1	0	0	1	1	1	0	helix-turn-helix,	Psq	domain
HTH_9	PF08221.6	gi|568164148|ref|YP_008947598.1|	-	0.11	12.3	0.1	0.24	11.3	0.0	1.6	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
NdhM	PF10664.4	gi|568164148|ref|YP_008947598.1|	-	0.12	12.2	0.0	0.24	11.3	0.0	1.6	1	1	0	1	1	1	0	Cyanobacterial	and	plastid	NDH-1	subunit	M
MarC	PF01914.12	gi|568164149|ref|YP_008947599.1|	-	3.5e-32	111.1	14.1	4.3e-32	110.8	9.8	1.1	1	0	0	1	1	1	1	MarC	family	integral	membrane	protein
DUF3087	PF11286.3	gi|568164149|ref|YP_008947599.1|	-	0.26	10.4	1.4	4.8	6.3	0.4	2.5	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF3087)
DUF4233	PF14017.1	gi|568164149|ref|YP_008947599.1|	-	7.3	6.5	7.8	0.48	10.3	0.4	2.4	2	2	0	2	2	2	0	Protein	of	unknown	function	(DUF4233)
Vps53_N	PF04100.7	gi|568164150|ref|YP_008947600.1|	-	0.029	13.1	1.8	0.036	12.8	1.2	1.1	1	0	0	1	1	1	0	Vps53-like,	N-terminal
Spc7	PF08317.6	gi|568164150|ref|YP_008947600.1|	-	0.05	12.2	4.7	0.055	12.1	3.2	1.1	1	0	0	1	1	1	0	Spc7	kinetochore	protein
DNA_ligase_A_N	PF04675.9	gi|568164150|ref|YP_008947600.1|	-	0.056	13.2	0.6	0.085	12.6	0.3	1.4	1	1	0	1	1	1	0	DNA	ligase	N	terminus
RTX_C	PF08339.5	gi|568164150|ref|YP_008947600.1|	-	0.059	13.0	0.6	0.067	12.8	0.4	1.1	1	0	0	1	1	1	0	RTX	C-terminal	domain
Occludin_ELL	PF07303.8	gi|568164150|ref|YP_008947600.1|	-	0.11	13.2	1.9	0.23	12.2	1.4	1.5	1	1	1	2	2	2	0	Occludin	homology	domain
DUF4208	PF13907.1	gi|568164150|ref|YP_008947600.1|	-	0.12	12.5	1.4	0.65	10.2	0.1	2.0	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4208)
Poty_PP	PF08440.5	gi|568164150|ref|YP_008947600.1|	-	0.17	10.9	1.7	0.19	10.7	1.2	1.1	1	0	0	1	1	1	0	Potyviridae	polyprotein
PNPase	PF03726.9	gi|568164150|ref|YP_008947600.1|	-	0.4	10.9	3.9	3.7	7.8	0.4	2.4	1	1	1	2	2	2	0	Polyribonucleotide	nucleotidyltransferase,	RNA	binding	domain
CDV3	PF15359.1	gi|568164150|ref|YP_008947600.1|	-	0.46	10.5	2.1	0.37	10.8	0.6	1.4	1	1	1	2	2	2	0	Carnitine	deficiency-associated	protein	3
Sigma70_r1_1	PF03979.9	gi|568164150|ref|YP_008947600.1|	-	0.67	9.9	5.9	0.63	10.0	2.7	2.0	1	1	1	2	2	2	0	Sigma-70	factor,	region	1.1
UPF0242	PF06785.6	gi|568164150|ref|YP_008947600.1|	-	1.9	7.0	6.7	1.9	7.0	4.6	1.0	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0242)
SSB	PF00436.20	gi|568164151|ref|YP_008947601.1|	-	0.073	12.9	0.1	0.12	12.2	0.1	1.4	1	1	0	1	1	1	0	Single-strand	binding	protein	family
DHO_dh	PF01180.16	gi|568164152|ref|YP_008947602.1|	-	1.7e-47	161.8	0.6	2.1e-47	161.5	0.4	1.1	1	0	0	1	1	1	1	Dihydroorotate	dehydrogenase
NMO	PF03060.10	gi|568164152|ref|YP_008947602.1|	-	0.17	11.0	0.7	0.57	9.2	0.2	1.9	2	1	0	2	2	2	0	Nitronate	monooxygenase
Amidohydro_1	PF01979.15	gi|568164153|ref|YP_008947603.1|	-	6.5e-16	58.9	0.0	1.3e-14	54.6	0.0	2.1	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|568164153|ref|YP_008947603.1|	-	7.5e-10	39.2	0.0	6.1e-06	26.4	0.0	2.6	2	1	0	3	3	3	2	Amidohydrolase
Amidohydro_3	PF07969.6	gi|568164153|ref|YP_008947603.1|	-	0.0042	16.3	0.0	0.1	11.8	0.0	2.2	2	0	0	2	2	2	1	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|568164153|ref|YP_008947603.1|	-	0.042	13.6	0.0	0.12	12.2	0.0	1.8	1	0	0	1	1	1	0	Amidohydrolase
DHODB_Fe-S_bind	PF10418.4	gi|568164154|ref|YP_008947604.1|	-	0.00019	20.8	4.9	0.00032	20.1	3.4	1.4	1	0	0	1	1	1	1	Iron-sulfur	cluster	binding	domain	of	dihydroorotate	dehydrogenase	B
PyrI	PF01948.13	gi|568164155|ref|YP_008947605.1|	-	3.2e-36	123.2	4.8	1.3e-35	121.2	3.4	1.8	2	0	0	2	2	2	1	Aspartate	carbamoyltransferase	regulatory	chain,	allosteric	domain
PyrI_C	PF02748.10	gi|568164155|ref|YP_008947605.1|	-	1.3e-17	62.9	1.9	2.3e-17	62.1	1.3	1.4	1	0	0	1	1	1	1	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
OTCace_N	PF02729.16	gi|568164156|ref|YP_008947606.1|	-	4.6e-43	146.2	0.0	8.1e-43	145.4	0.0	1.4	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
OTCace	PF00185.19	gi|568164156|ref|YP_008947606.1|	-	1.4e-32	112.7	0.0	2.1e-32	112.1	0.0	1.3	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
Pribosyltran	PF00156.22	gi|568164157|ref|YP_008947607.1|	-	2.2e-20	72.6	1.5	4.1e-20	71.7	1.1	1.5	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.1	gi|568164157|ref|YP_008947607.1|	-	0.00012	21.4	0.0	0.00017	20.9	0.0	1.2	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
PRTase_2	PF15609.1	gi|568164157|ref|YP_008947607.1|	-	0.011	15.0	0.0	0.015	14.6	0.0	1.2	1	0	0	1	1	1	0	Phosphoribosyl	transferase
OMPdecase	PF00215.19	gi|568164158|ref|YP_008947608.1|	-	2.1e-21	76.3	0.0	2.7e-21	76.0	0.0	1.1	1	0	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
JAB	PF01398.16	gi|568164159|ref|YP_008947609.1|	-	0.023	14.4	0.0	0.073	12.8	0.0	1.9	1	1	0	1	1	1	0	JAB1/Mov34/MPN/PAD-1	ubiquitin	protease
Prok-JAB	PF14464.1	gi|568164159|ref|YP_008947609.1|	-	0.087	12.4	0.0	0.19	11.3	0.0	1.6	1	0	0	1	1	1	0	Prokaryotic	homologs	of	the	JAB	domain
PhoU	PF01895.14	gi|568164160|ref|YP_008947610.1|	-	6.4e-21	74.6	6.5	2.7e-15	56.5	0.2	2.7	3	0	0	3	3	3	2	PhoU	domain
Antitoxin-MazE	PF04014.13	gi|568164160|ref|YP_008947610.1|	-	6.5e-11	41.7	0.2	2.9e-10	39.6	0.0	2.1	2	0	0	2	2	2	1	Antidote-toxin	recognition	MazE
DUF4007	PF13182.1	gi|568164160|ref|YP_008947610.1|	-	0.033	13.0	1.1	0.055	12.2	0.0	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4007)
FliW	PF02623.10	gi|568164160|ref|YP_008947610.1|	-	0.086	12.4	0.2	0.39	10.2	0.0	2.1	2	0	0	2	2	2	0	FliW	protein
Foie-gras_1	PF11817.3	gi|568164160|ref|YP_008947610.1|	-	0.11	11.9	0.1	0.18	11.2	0.1	1.3	1	0	0	1	1	1	0	Foie	gras	liver	health	family	1
DUF192	PF02643.10	gi|568164160|ref|YP_008947610.1|	-	0.14	11.8	0.0	0.32	10.6	0.0	1.6	1	0	0	1	1	1	0	Uncharacterized	ACR,	COG1430
HisK_N	PF09385.5	gi|568164160|ref|YP_008947610.1|	-	0.34	10.5	3.6	2.2	7.8	0.2	2.5	2	1	0	2	2	2	0	Histidine	kinase	N	terminal
DUF2106	PF09879.4	gi|568164887|ref|YP_008947611.1|	-	0.0041	16.4	0.1	0.0069	15.7	0.0	1.4	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2106)
TYW3	PF02676.9	gi|568164162|ref|YP_008947614.1|	-	1.8e-47	161.1	0.0	2e-47	160.9	0.0	1.0	1	0	0	1	1	1	1	Methyltransferase	TYW3
Fer4_14	PF13394.1	gi|568164163|ref|YP_008947615.1|	-	4e-18	65.5	0.0	6.3e-18	64.9	0.0	1.4	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Radical_SAM	PF04055.16	gi|568164163|ref|YP_008947615.1|	-	6.3e-16	58.9	0.0	1.1e-15	58.2	0.0	1.5	1	1	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|568164163|ref|YP_008947615.1|	-	1.1e-10	41.7	0.0	1.7e-10	41.1	0.0	1.3	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
SIR2	PF02146.12	gi|568164163|ref|YP_008947615.1|	-	0.048	13.3	0.0	0.071	12.8	0.0	1.2	1	0	0	1	1	1	0	Sir2	family
MMR_HSR1	PF01926.18	gi|568164164|ref|YP_008947616.1|	-	9e-18	64.3	0.9	2.2e-17	63.0	0.2	2.0	2	1	0	2	2	2	1	50S	ribosome-binding	GTPase
NOG1	PF06858.9	gi|568164164|ref|YP_008947616.1|	-	2.9e-17	62.2	0.7	3.3e-16	58.8	0.1	2.4	2	0	0	2	2	2	1	Nucleolar	GTP-binding	protein	1	(NOG1)
FeoB_N	PF02421.13	gi|568164164|ref|YP_008947616.1|	-	1.6e-14	53.4	0.4	2.3e-14	52.9	0.3	1.2	1	0	0	1	1	1	1	Ferrous	iron	transport	protein	B
PduV-EutP	PF10662.4	gi|568164164|ref|YP_008947616.1|	-	2.9e-06	26.8	0.2	6.9e-06	25.6	0.1	1.7	1	1	0	1	1	1	1	Ethanolamine	utilisation	-	propanediol	utilisation
GTP_EFTU	PF00009.22	gi|568164164|ref|YP_008947616.1|	-	4.9e-06	26.1	0.2	0.00081	18.8	0.3	2.7	1	1	1	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
Dynamin_N	PF00350.18	gi|568164164|ref|YP_008947616.1|	-	4.9e-06	26.4	1.5	8.9e-05	22.3	0.1	2.4	1	1	1	2	2	2	1	Dynamin	family
Miro	PF08477.8	gi|568164164|ref|YP_008947616.1|	-	4.5e-05	23.9	0.0	8.1e-05	23.1	0.0	1.4	1	0	0	1	1	1	1	Miro-like	protein
Gtr1_RagA	PF04670.7	gi|568164164|ref|YP_008947616.1|	-	5e-05	22.5	0.0	9.6e-05	21.6	0.0	1.5	1	0	0	1	1	1	1	Gtr1/RagA	G	protein	conserved	region
AAA_14	PF13173.1	gi|568164164|ref|YP_008947616.1|	-	0.0015	18.4	2.8	0.73	9.7	0.0	3.3	3	1	0	3	3	3	1	AAA	domain
AIG1	PF04548.11	gi|568164164|ref|YP_008947616.1|	-	0.0026	16.8	0.1	0.0047	16.0	0.1	1.5	1	0	0	1	1	1	1	AIG1	family
Arch_ATPase	PF01637.13	gi|568164164|ref|YP_008947616.1|	-	0.0038	16.9	2.9	0.091	12.4	0.4	3.0	1	1	0	2	2	2	1	Archaeal	ATPase
DUF258	PF03193.11	gi|568164164|ref|YP_008947616.1|	-	0.0072	15.5	0.4	0.038	13.1	0.1	2.2	2	1	0	2	2	2	1	Protein	of	unknown	function,	DUF258
AAA_17	PF13207.1	gi|568164164|ref|YP_008947616.1|	-	0.019	15.7	0.2	0.065	14.0	0.0	2.2	2	1	0	2	2	1	0	AAA	domain
NTPase_1	PF03266.10	gi|568164164|ref|YP_008947616.1|	-	0.023	14.3	0.3	0.15	11.8	0.0	2.3	2	0	0	2	2	2	0	NTPase
AAA_18	PF13238.1	gi|568164164|ref|YP_008947616.1|	-	0.031	14.5	0.0	0.13	12.5	0.0	2.2	1	1	0	1	1	1	0	AAA	domain
Ras	PF00071.17	gi|568164164|ref|YP_008947616.1|	-	0.032	13.6	0.0	0.11	11.9	0.0	1.8	1	1	0	1	1	1	0	Ras	family
ATP_bind_1	PF03029.12	gi|568164164|ref|YP_008947616.1|	-	0.063	12.8	0.0	11	5.4	0.0	2.3	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
MobB	PF03205.9	gi|568164164|ref|YP_008947616.1|	-	0.071	12.8	0.0	0.14	11.8	0.0	1.4	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
tRNA_bind	PF01588.15	gi|568164165|ref|YP_008947617.1|	-	3.4e-29	100.5	0.2	3.9e-29	100.3	0.1	1.0	1	0	0	1	1	1	1	Putative	tRNA	binding	domain
SAICAR_synt	PF01259.13	gi|568164166|ref|YP_008947618.1|	-	2.3e-53	180.8	0.8	2.7e-53	180.6	0.5	1.0	1	0	0	1	1	1	1	SAICAR	synthetase
PurS	PF02700.9	gi|568164167|ref|YP_008947619.1|	-	7.7e-21	73.8	0.3	8.6e-21	73.6	0.2	1.0	1	0	0	1	1	1	1	Phosphoribosylformylglycinamidine	(FGAM)	synthase
HORMA	PF02301.13	gi|568164167|ref|YP_008947619.1|	-	0.019	14.4	0.4	0.021	14.2	0.3	1.0	1	0	0	1	1	1	0	HORMA	domain
GATase_5	PF13507.1	gi|568164168|ref|YP_008947620.1|	-	7.9e-44	149.4	0.0	9.8e-44	149.2	0.0	1.0	1	0	0	1	1	1	1	CobB/CobQ-like	glutamine	amidotransferase	domain
GATase_3	PF07685.9	gi|568164168|ref|YP_008947620.1|	-	1.2e-09	37.9	0.0	1.5e-08	34.4	0.0	2.4	2	1	1	3	3	3	1	CobB/CobQ-like	glutamine	amidotransferase	domain
DJ-1_PfpI	PF01965.19	gi|568164168|ref|YP_008947620.1|	-	5.1e-09	35.7	0.0	9.8e-09	34.8	0.0	1.3	1	1	0	1	1	1	1	DJ-1/PfpI	family
GATase	PF00117.23	gi|568164168|ref|YP_008947620.1|	-	7.1e-08	32.1	0.0	1.4e-07	31.2	0.0	1.5	1	1	0	1	1	1	1	Glutamine	amidotransferase	class-I
DUF4066	PF13278.1	gi|568164168|ref|YP_008947620.1|	-	5e-05	22.6	0.0	8.1e-05	21.9	0.0	1.3	1	0	0	1	1	1	1	Putative	amidotransferase
AIRS_C	PF02769.17	gi|568164169|ref|YP_008947621.1|	-	8.7e-38	129.7	0.5	3.9e-25	88.6	0.3	2.3	2	0	0	2	2	2	2	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|568164169|ref|YP_008947621.1|	-	1.2e-35	121.6	0.4	6.4e-22	77.6	0.0	2.6	2	0	0	2	2	2	2	AIR	synthase	related	protein,	N-terminal	domain
Pribosyltran	PF00156.22	gi|568164170|ref|YP_008947622.1|	-	4.5e-16	58.7	0.6	1.2e-15	57.3	0.3	1.8	1	1	1	2	2	2	1	Phosphoribosyl	transferase	domain
GATase_6	PF13522.1	gi|568164170|ref|YP_008947622.1|	-	2.9e-13	49.9	0.0	7.4e-13	48.6	0.0	1.7	2	0	0	2	2	2	1	Glutamine	amidotransferase	domain
GATase_2	PF00310.16	gi|568164170|ref|YP_008947622.1|	-	3.2e-13	49.1	0.0	1.6e-05	23.7	0.0	3.4	2	1	1	3	3	3	3	Glutamine	amidotransferases	class-II
GATase_7	PF13537.1	gi|568164170|ref|YP_008947622.1|	-	8.6e-12	44.8	0.0	6.8e-11	41.9	0.0	2.2	1	1	0	1	1	1	1	Glutamine	amidotransferase	domain
PRTase_2	PF15609.1	gi|568164170|ref|YP_008947622.1|	-	0.18	11.0	0.0	0.32	10.2	0.0	1.3	1	0	0	1	1	1	0	Phosphoribosyl	transferase
Pribosyltran	PF00156.22	gi|568164171|ref|YP_008947623.1|	-	4.1e-15	55.5	0.1	8.5e-15	54.5	0.1	1.4	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
GATase_2	PF00310.16	gi|568164171|ref|YP_008947623.1|	-	0.0021	16.8	0.0	0.38	9.3	0.0	2.1	2	0	0	2	2	2	2	Glutamine	amidotransferases	class-II
PRTase_2	PF15609.1	gi|568164171|ref|YP_008947623.1|	-	0.0056	16.0	0.0	0.014	14.7	0.0	1.5	2	0	0	2	2	2	1	Phosphoribosyl	transferase
GATase_7	PF13537.1	gi|568164171|ref|YP_008947623.1|	-	0.0065	16.1	0.0	0.02	14.6	0.0	1.7	2	0	0	2	2	2	1	Glutamine	amidotransferase	domain
GARS_A	PF01071.14	gi|568164172|ref|YP_008947624.1|	-	1.4e-38	132.3	0.0	2.6e-38	131.5	0.0	1.4	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
GARS_N	PF02844.10	gi|568164172|ref|YP_008947624.1|	-	1.2e-22	80.1	0.1	2.6e-22	79.1	0.0	1.6	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	N	domain
GARS_C	PF02843.11	gi|568164172|ref|YP_008947624.1|	-	8.9e-10	38.6	0.0	2.3e-09	37.2	0.0	1.7	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	C	domain
ATP-grasp_4	PF13535.1	gi|568164172|ref|YP_008947624.1|	-	9e-10	38.5	0.0	1.8e-09	37.5	0.0	1.5	1	0	0	1	1	1	1	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|568164172|ref|YP_008947624.1|	-	2e-06	26.8	0.0	2.9e-06	26.2	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
CPSase_L_D2	PF02786.12	gi|568164172|ref|YP_008947624.1|	-	9.9e-05	21.7	0.0	0.00023	20.5	0.0	1.5	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Dala_Dala_lig_C	PF07478.8	gi|568164172|ref|YP_008947624.1|	-	0.017	14.5	0.2	0.046	13.0	0.1	1.7	1	1	0	1	1	1	0	D-ala	D-ala	ligase	C-terminus
DUF448	PF04296.8	gi|568164172|ref|YP_008947624.1|	-	0.019	14.5	0.0	0.054	13.1	0.0	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF448)
AIRS_C	PF02769.17	gi|568164173|ref|YP_008947625.1|	-	4.3e-25	88.5	0.0	6.6e-25	87.9	0.0	1.2	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|568164173|ref|YP_008947625.1|	-	4.6e-17	62.0	0.8	8.3e-17	61.2	0.6	1.4	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
DUF3505	PF12013.3	gi|568164174|ref|YP_008947626.1|	-	0.01	16.0	0.1	0.014	15.5	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3505)
DnaI_N	PF07319.6	gi|568164174|ref|YP_008947626.1|	-	0.025	14.8	0.1	0.058	13.6	0.1	1.6	1	0	0	1	1	1	0	Primosomal	protein	DnaI	N-terminus
DUF4120	PF13496.1	gi|568164174|ref|YP_008947626.1|	-	0.042	13.8	0.2	0.11	12.5	0.1	1.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4120)
PRP21_like_P	PF12230.3	gi|568164174|ref|YP_008947626.1|	-	0.044	13.2	0.1	0.064	12.7	0.1	1.3	1	0	0	1	1	1	0	Pre-mRNA	splicing	factor	PRP21	like	protein
Syntaxin_2	PF14523.1	gi|568164174|ref|YP_008947626.1|	-	0.047	13.7	0.1	0.093	12.7	0.1	1.4	1	1	0	1	1	1	0	Syntaxin-like	protein
PapB	PF03333.8	gi|568164174|ref|YP_008947626.1|	-	0.059	13.1	0.0	0.13	12.0	0.0	1.6	1	0	0	1	1	1	0	Adhesin	biosynthesis	transcription	regulatory	protein
TrbI_Ftype	PF09677.5	gi|568164174|ref|YP_008947626.1|	-	0.1	12.4	0.0	1.4	8.7	0.0	2.1	2	0	0	2	2	2	0	Type-F	conjugative	transfer	system	protein	(TrbI_Ftype)
RHH_1	PF01402.16	gi|568164175|ref|YP_008947627.1|	-	0.00046	19.9	0.0	0.00061	19.5	0.0	1.2	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
Arginosuc_synth	PF00764.14	gi|568164176|ref|YP_008947628.1|	-	3.4e-141	470.7	0.0	3.9e-141	470.5	0.0	1.0	1	0	0	1	1	1	1	Arginosuccinate	synthase
QueC	PF06508.8	gi|568164176|ref|YP_008947628.1|	-	0.00047	19.5	0.1	0.00087	18.6	0.1	1.6	1	1	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
Asn_synthase	PF00733.16	gi|568164176|ref|YP_008947628.1|	-	0.01	15.3	0.0	0.018	14.5	0.0	1.5	1	0	0	1	1	1	0	Asparagine	synthase
PAPS_reduct	PF01507.14	gi|568164176|ref|YP_008947628.1|	-	0.024	14.4	0.0	0.069	12.9	0.0	1.8	1	1	0	1	1	1	0	Phosphoadenosine	phosphosulfate	reductase	family
Phage_30_8	PF06019.6	gi|568164176|ref|YP_008947628.1|	-	0.055	13.1	0.2	0.48	10.1	0.1	2.3	2	0	0	2	2	2	0	Phage	GP30.8	protein
ThiI	PF02568.9	gi|568164176|ref|YP_008947628.1|	-	0.12	11.8	0.1	0.48	9.8	0.1	1.7	1	1	0	1	1	1	0	Thiamine	biosynthesis	protein	(ThiI)
Lyase_1	PF00206.15	gi|568164177|ref|YP_008947629.1|	-	5.6e-40	137.4	0.0	1e-39	136.6	0.0	1.4	1	0	0	1	1	1	1	Lyase
ASL_C2	PF14698.1	gi|568164177|ref|YP_008947629.1|	-	0.0014	18.6	0.0	0.0076	16.2	0.0	2.2	2	0	0	2	2	2	1	Argininosuccinate	lyase	C-terminal
CPSase_sm_chain	PF00988.17	gi|568164178|ref|YP_008947630.1|	-	1.2e-48	163.8	0.0	1.9e-48	163.2	0.0	1.3	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	small	chain,	CPSase	domain
GATase	PF00117.23	gi|568164178|ref|YP_008947630.1|	-	7.5e-37	126.6	0.0	1.2e-36	125.9	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|568164178|ref|YP_008947630.1|	-	2.9e-06	26.8	0.8	0.00033	20.1	0.5	2.2	1	1	0	1	1	1	1	Peptidase	C26
CPSase_L_D2	PF02786.12	gi|568164179|ref|YP_008947631.1|	-	1.9e-97	324.6	0.0	7.6e-66	221.4	0.0	2.3	2	0	0	2	2	2	2	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
CPSase_L_D3	PF02787.14	gi|568164179|ref|YP_008947631.1|	-	7.5e-39	132.2	0.1	1.8e-38	131.0	0.1	1.7	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
CPSase_L_chain	PF00289.17	gi|568164179|ref|YP_008947631.1|	-	3.8e-35	120.3	0.0	2.6e-19	69.3	0.0	2.6	2	0	0	2	2	2	2	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
ATP-grasp_4	PF13535.1	gi|568164179|ref|YP_008947631.1|	-	2e-29	102.6	0.0	2.9e-16	59.7	0.0	2.3	2	0	0	2	2	2	2	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|568164179|ref|YP_008947631.1|	-	4.8e-21	74.8	0.0	4.5e-11	42.0	0.0	4.2	3	1	0	3	3	3	3	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp	PF02222.17	gi|568164179|ref|YP_008947631.1|	-	3.3e-19	68.8	0.0	3.1e-09	36.4	0.0	2.3	2	0	0	2	2	2	2	ATP-grasp	domain
Dala_Dala_lig_C	PF07478.8	gi|568164179|ref|YP_008947631.1|	-	3e-14	52.9	0.1	1.1e-07	31.4	0.1	2.8	2	1	0	2	2	2	2	D-ala	D-ala	ligase	C-terminus
ATP-grasp_3	PF02655.9	gi|568164179|ref|YP_008947631.1|	-	3e-08	33.6	0.3	0.00074	19.4	0.1	3.2	2	2	0	2	2	2	2	ATP-grasp	domain
RimK	PF08443.6	gi|568164179|ref|YP_008947631.1|	-	1.8e-07	30.8	0.0	5.3e-05	22.7	0.0	2.7	2	0	0	2	2	2	1	RimK-like	ATP-grasp	domain
ATP-grasp_5	PF13549.1	gi|568164179|ref|YP_008947631.1|	-	9.9e-06	24.9	0.1	0.013	14.7	0.0	3.1	3	1	0	3	3	3	2	ATP-grasp	domain
GARS_A	PF01071.14	gi|568164179|ref|YP_008947631.1|	-	0.00028	20.5	0.1	0.023	14.2	0.0	2.9	2	1	0	2	2	2	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATP-grasp_2	PF08442.5	gi|568164179|ref|YP_008947631.1|	-	0.0028	17.0	0.0	0.13	11.6	0.0	3.3	4	0	0	4	4	4	1	ATP-grasp	domain
RimK	PF08443.6	gi|568164180|ref|YP_008947632.1|	-	5.7e-37	127.0	0.1	1.4e-36	125.8	0.0	1.6	2	0	0	2	2	2	1	RimK-like	ATP-grasp	domain
GSH-S_ATP	PF02955.11	gi|568164180|ref|YP_008947632.1|	-	2.6e-08	33.1	0.0	4.6e-08	32.4	0.0	1.3	1	0	0	1	1	1	1	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|568164180|ref|YP_008947632.1|	-	8.4e-07	28.0	0.0	1.3e-06	27.4	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp_3	PF02655.9	gi|568164180|ref|YP_008947632.1|	-	1.6e-06	28.0	0.0	2.6e-06	27.3	0.0	1.3	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|568164180|ref|YP_008947632.1|	-	5.5e-06	26.2	0.0	9.1e-06	25.5	0.0	1.5	1	1	0	1	1	1	1	ATP-grasp	domain
Translin	PF01997.11	gi|568164181|ref|YP_008947633.1|	-	1.4e-29	103.1	2.3	1.6e-29	102.9	1.6	1.1	1	0	0	1	1	1	1	Translin	family
HTH_Tnp_IS630	PF01710.11	gi|568164181|ref|YP_008947633.1|	-	0.013	15.1	0.3	0.38	10.4	0.1	2.6	2	1	1	3	3	3	0	Transposase
DUF2573	PF10835.3	gi|568164181|ref|YP_008947633.1|	-	0.026	14.5	0.1	0.11	12.5	0.1	2.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2573)
TPR_11	PF13414.1	gi|568164181|ref|YP_008947633.1|	-	0.032	13.8	2.5	1.1	9.0	0.2	2.6	2	0	0	2	2	2	0	TPR	repeat
XH	PF03469.9	gi|568164181|ref|YP_008947633.1|	-	0.043	13.4	0.6	0.24	11.0	0.0	2.0	2	0	0	2	2	2	0	XH	domain
TPR_2	PF07719.12	gi|568164181|ref|YP_008947633.1|	-	1.5	8.9	6.3	5.2	7.2	0.3	3.1	2	1	1	3	3	3	0	Tetratricopeptide	repeat
FlaC_arch	PF05377.6	gi|568164181|ref|YP_008947633.1|	-	5.1	7.0	5.6	8.9	6.2	1.6	2.7	2	1	1	3	3	3	0	Flagella	accessory	protein	C	(FlaC)
3HCDH_N	PF02737.13	gi|568164182|ref|YP_008947634.1|	-	3.3e-48	163.7	0.0	5.1e-48	163.0	0.0	1.3	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
3HCDH	PF00725.17	gi|568164182|ref|YP_008947634.1|	-	6.4e-16	58.5	0.1	1.3e-15	57.5	0.1	1.5	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
NAD_Gly3P_dh_N	PF01210.18	gi|568164182|ref|YP_008947634.1|	-	0.08	12.6	0.0	0.14	11.8	0.0	1.5	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
ApbA	PF02558.11	gi|568164182|ref|YP_008947634.1|	-	0.081	12.3	0.0	0.18	11.2	0.0	1.6	1	0	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA
Cupin_2	PF07883.6	gi|568164183|ref|YP_008947635.1|	-	1.4e-15	56.5	0.1	2e-15	56.0	0.1	1.3	1	0	0	1	1	1	1	Cupin	domain
Cupin_1	PF00190.17	gi|568164183|ref|YP_008947635.1|	-	6e-12	45.2	0.0	1.2e-11	44.1	0.0	1.5	1	0	0	1	1	1	1	Cupin
AraC_binding	PF02311.14	gi|568164183|ref|YP_008947635.1|	-	1.5e-07	31.1	0.0	2.9e-07	30.2	0.0	1.4	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
CENP-C_C	PF11699.3	gi|568164183|ref|YP_008947635.1|	-	9.1e-05	22.3	0.0	0.00015	21.7	0.0	1.3	1	0	0	1	1	1	1	Mif2/CENP-C	like
ARD	PF03079.9	gi|568164183|ref|YP_008947635.1|	-	9.9e-05	22.3	1.1	0.00051	20.0	0.0	2.1	2	1	0	2	2	2	1	ARD/ARD'	family
Asp_Arg_Hydrox	PF05118.10	gi|568164183|ref|YP_008947635.1|	-	0.0003	20.6	0.0	0.00077	19.3	0.0	1.7	1	1	0	1	1	1	1	Aspartyl/Asparaginyl	beta-hydroxylase
Cupin_6	PF12852.2	gi|568164183|ref|YP_008947635.1|	-	0.0064	16.1	0.0	0.0087	15.6	0.0	1.2	1	0	0	1	1	1	1	Cupin
EutQ	PF06249.7	gi|568164183|ref|YP_008947635.1|	-	0.011	15.3	0.0	0.017	14.6	0.0	1.3	1	0	0	1	1	1	0	Ethanolamine	utilisation	protein	EutQ
Auxin_BP	PF02041.11	gi|568164183|ref|YP_008947635.1|	-	0.015	14.7	0.1	0.033	13.6	0.0	1.6	1	1	0	1	1	1	0	Auxin	binding	protein
Prefoldin_2	PF01920.15	gi|568164183|ref|YP_008947635.1|	-	0.042	13.6	0.5	6.6	6.5	0.0	2.2	2	0	0	2	2	2	0	Prefoldin	subunit
Cupin_3	PF05899.7	gi|568164183|ref|YP_008947635.1|	-	0.089	12.1	0.0	0.13	11.6	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF861)
GPI	PF06560.6	gi|568164183|ref|YP_008947635.1|	-	0.11	11.5	0.3	0.33	9.9	0.2	1.8	1	1	0	1	1	1	0	Glucose-6-phosphate	isomerase	(GPI)
AraC_N	PF06719.8	gi|568164183|ref|YP_008947635.1|	-	0.11	11.7	0.0	0.23	10.7	0.0	1.5	1	0	0	1	1	1	0	AraC-type	transcriptional	regulator	N-terminus
DUF326	PF03860.11	gi|568164184|ref|YP_008947636.1|	-	0.94	9.4	7.3	6.8	6.6	0.1	2.9	2	1	0	2	2	2	0	Domain	of	Unknown	Function	(DUF326)
zf-C4pol	PF14260.1	gi|568164184|ref|YP_008947636.1|	-	1.2	9.2	8.2	0.18	11.8	1.3	2.1	2	0	0	2	2	2	0	C4-type	zinc-finger	of	DNA	polymerase	delta
Fusion_gly	PF00523.13	gi|568164184|ref|YP_008947636.1|	-	1.5	6.8	6.4	1.8	6.5	4.5	1.0	1	0	0	1	1	1	0	Fusion	glycoprotein	F0
Cys_rich_VLP	PF14194.1	gi|568164184|ref|YP_008947636.1|	-	3.3	7.4	6.8	1.7	8.4	0.9	2.1	1	1	1	2	2	2	0	Cysteine-rich	VLP
VIT1	PF01988.14	gi|568164185|ref|YP_008947637.1|	-	4.8e-19	68.6	15.1	1.6e-17	63.7	10.4	2.0	1	1	0	1	1	1	1	VIT	family
DUF2142	PF09913.4	gi|568164185|ref|YP_008947637.1|	-	0.00039	19.2	7.3	0.00043	19.0	5.1	1.0	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2142)
7TM-7TMR_HD	PF07698.6	gi|568164185|ref|YP_008947637.1|	-	0.0081	15.6	6.0	0.0081	15.6	4.2	2.1	2	0	0	2	2	2	2	7TM	receptor	with	intracellular	HD	hydrolase
DUF3815	PF12821.2	gi|568164185|ref|YP_008947637.1|	-	0.37	10.7	8.7	2.7	7.9	2.3	2.5	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3815)
DUF1212	PF06738.7	gi|568164185|ref|YP_008947637.1|	-	0.64	9.4	6.0	1.6	8.1	4.1	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1212)
DUF4491	PF14898.1	gi|568164185|ref|YP_008947637.1|	-	6.2	7.0	14.7	1.7	8.8	2.8	3.2	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4491)
GSHPx	PF00255.14	gi|568164186|ref|YP_008947638.1|	-	0.046	13.1	0.1	0.09	12.1	0.1	1.5	1	0	0	1	1	1	0	Glutathione	peroxidase
BiPBP_C	PF06832.7	gi|568164186|ref|YP_008947638.1|	-	0.085	12.7	0.0	0.16	11.9	0.0	1.4	1	0	0	1	1	1	0	Penicillin-Binding	Protein	C-terminus	Family
Cna_B	PF05738.8	gi|568164186|ref|YP_008947638.1|	-	0.44	10.3	5.8	1.2	8.8	4.0	1.8	1	1	0	1	1	1	0	Cna	protein	B-type	domain
Y_Y_Y	PF07495.8	gi|568164186|ref|YP_008947638.1|	-	0.93	9.2	5.1	3.8	7.3	0.1	2.6	2	1	0	2	2	2	0	Y_Y_Y	domain
Adenosine_kin	PF04008.9	gi|568164187|ref|YP_008947639.1|	-	4.9e-78	259.9	0.2	5.5e-78	259.8	0.1	1.0	1	0	0	1	1	1	1	Adenosine	specific	kinase
Dak1_2	PF13684.1	gi|568164889|ref|YP_008947640.1|	-	0.078	11.8	0.4	0.1	11.5	0.2	1.2	1	1	0	1	1	1	0	Dihydroxyacetone	kinase	family
SSXT	PF05030.7	gi|568164889|ref|YP_008947640.1|	-	0.1	12.1	0.1	0.16	11.5	0.0	1.3	1	0	0	1	1	1	0	SSXT	protein	(N-terminal	region)
Radical_SAM	PF04055.16	gi|568164188|ref|YP_008947641.1|	-	1.1e-19	71.1	0.4	6.5e-19	68.6	0.0	2.3	3	0	0	3	3	3	1	Radical	SAM	superfamily
zf-ribbon_3	PF13248.1	gi|568164188|ref|YP_008947641.1|	-	0.00084	18.4	0.8	0.00084	18.4	0.6	2.9	2	1	0	2	2	2	1	zinc-ribbon	domain
Fer4_12	PF13353.1	gi|568164188|ref|YP_008947641.1|	-	0.00094	19.3	0.2	0.0026	17.8	0.0	1.8	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
DZR	PF12773.2	gi|568164188|ref|YP_008947641.1|	-	0.0031	17.2	0.1	0.0031	17.2	0.0	2.7	3	0	0	3	3	3	1	Double	zinc	ribbon
UPF0547	PF10571.4	gi|568164188|ref|YP_008947641.1|	-	0.0044	16.6	0.3	0.016	14.8	0.2	2.0	1	1	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
zinc_ribbon_2	PF13240.1	gi|568164188|ref|YP_008947641.1|	-	0.4	10.2	10.6	0.53	9.8	0.2	3.3	3	0	0	3	3	3	0	zinc-ribbon	domain
zf-ISL3	PF14690.1	gi|568164188|ref|YP_008947641.1|	-	0.61	10.1	0.1	0.61	10.1	0.1	2.9	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
DNA_RNApol_7kD	PF03604.8	gi|568164188|ref|YP_008947641.1|	-	1.1	8.7	0.0	1.1	8.7	0.0	3.7	4	0	0	4	4	4	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-C2H2	PF00096.21	gi|568164188|ref|YP_008947641.1|	-	2.1	8.8	6.0	13	6.3	0.1	3.2	3	0	0	3	3	3	0	Zinc	finger,	C2H2	type
TF_Zn_Ribbon	PF08271.7	gi|568164188|ref|YP_008947641.1|	-	6	6.2	9.0	2.8	7.3	1.2	3.2	3	1	0	3	3	3	0	TFIIB	zinc-binding
ECH	PF00378.15	gi|568164189|ref|YP_008947642.1|	-	1.6e-71	240.3	0.0	2e-71	240.0	0.0	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
SDH_sah	PF01972.11	gi|568164189|ref|YP_008947642.1|	-	0.015	14.0	0.0	0.067	11.9	0.0	1.8	1	1	1	2	2	2	0	Serine	dehydrogenase	proteinase
Herpes_UL33	PF03581.8	gi|568164890|ref|YP_008947643.1|	-	0.052	13.4	0.0	0.09	12.6	0.0	1.3	1	0	0	1	1	1	0	Herpesvirus	UL33-like	protein
UbiA	PF01040.13	gi|568164190|ref|YP_008947644.1|	-	4.3e-27	94.9	24.8	5.4e-27	94.6	17.2	1.1	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
DUF751	PF05421.6	gi|568164190|ref|YP_008947644.1|	-	6.6	7.1	15.4	1.6	9.0	0.5	4.1	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF751)
Homoserine_dh	PF00742.14	gi|568164191|ref|YP_008947645.1|	-	5.2e-52	176.1	0.0	7.7e-52	175.5	0.0	1.3	1	0	0	1	1	1	1	Homoserine	dehydrogenase
NAD_binding_3	PF03447.11	gi|568164191|ref|YP_008947645.1|	-	0.048	14.0	0.0	0.16	12.3	0.0	1.9	1	1	0	1	1	1	0	Homoserine	dehydrogenase,	NAD	binding	domain
B3_4	PF03483.12	gi|568164192|ref|YP_008947646.1|	-	2.2e-29	102.1	0.0	3.5e-29	101.4	0.0	1.3	1	0	0	1	1	1	1	B3/4	domain
PmbA_TldD	PF01523.11	gi|568164193|ref|YP_008947647.1|	-	6e-54	183.3	0.8	7.6e-54	182.9	0.5	1.1	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
Tup_N	PF08581.5	gi|568164193|ref|YP_008947647.1|	-	0.41	10.8	3.1	0.29	11.3	0.7	1.8	2	0	0	2	2	2	0	Tup	N-terminal
PmbA_TldD	PF01523.11	gi|568164194|ref|YP_008947648.1|	-	1.4e-48	165.6	0.1	1.9e-48	165.2	0.1	1.1	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
Usp	PF00582.21	gi|568164195|ref|YP_008947649.1|	-	4.5e-37	127.3	0.2	5e-37	127.2	0.2	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
BPL_LplA_LipB	PF03099.14	gi|568164196|ref|YP_008947650.1|	-	2.4e-18	66.3	0.9	5.5e-18	65.1	0.1	1.8	2	0	0	2	2	2	1	Biotin/lipoate	A/B	protein	ligase	family
Sua5_yciO_yrdC	PF01300.13	gi|568164197|ref|YP_008947651.1|	-	2e-57	193.3	0.0	3e-57	192.7	0.0	1.3	1	0	0	1	1	1	1	Telomere	recombination
SUA5	PF03481.8	gi|568164197|ref|YP_008947651.1|	-	4.5e-23	81.6	0.0	6.5e-23	81.1	0.0	1.3	1	0	0	1	1	1	1	Putative	GTP-binding	controlling	metal-binding
Oxidored_q6	PF01058.17	gi|568164198|ref|YP_008947652.1|	-	3.9e-21	75.0	0.0	5.1e-21	74.6	0.0	1.2	1	0	0	1	1	1	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
Peptidase_M20	PF01546.23	gi|568164199|ref|YP_008947653.1|	-	4.1e-40	137.3	0.0	5.1e-40	137.0	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|568164199|ref|YP_008947653.1|	-	1.2e-18	66.9	0.0	2.2e-18	66.0	0.0	1.4	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Peptidase_M28	PF04389.12	gi|568164199|ref|YP_008947653.1|	-	2.8e-06	27.2	0.0	0.00052	19.7	0.0	2.2	2	0	0	2	2	2	2	Peptidase	family	M28
Peptidase_M42	PF05343.9	gi|568164199|ref|YP_008947653.1|	-	0.002	16.9	0.0	0.13	10.9	0.0	2.8	3	0	0	3	3	3	1	M42	glutamyl	aminopeptidase
VIT1	PF01988.14	gi|568164200|ref|YP_008947654.1|	-	1.9e-45	154.9	8.2	1.9e-45	154.9	5.7	2.0	3	0	0	3	3	3	1	VIT	family
Rubrerythrin	PF02915.12	gi|568164200|ref|YP_008947654.1|	-	1e-10	42.0	9.1	1.7e-10	41.3	6.3	1.3	1	0	0	1	1	1	1	Rubrerythrin
Rhomboid	PF01694.17	gi|568164200|ref|YP_008947654.1|	-	0.15	12.0	7.9	0.2	11.6	0.1	2.2	2	0	0	2	2	2	0	Rhomboid	family
MFS_1	PF07690.11	gi|568164201|ref|YP_008947655.1|	-	2.4e-55	187.6	45.5	2.4e-55	187.6	31.6	2.0	2	0	0	2	2	2	1	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|568164201|ref|YP_008947655.1|	-	2.1e-09	36.0	11.1	1.7e-08	33.0	4.3	2.3	2	0	0	2	2	2	2	Transmembrane	secretion	effector
PK	PF00224.16	gi|568164202|ref|YP_008947656.1|	-	1.5e-82	277.0	2.4	2.3e-82	276.3	1.6	1.3	1	0	0	1	1	1	1	Pyruvate	kinase,	barrel	domain
PK_C	PF02887.11	gi|568164202|ref|YP_008947656.1|	-	7e-21	73.9	0.1	1.4e-20	72.9	0.0	1.6	1	0	0	1	1	1	1	Pyruvate	kinase,	alpha/beta	domain
HpcH_HpaI	PF03328.9	gi|568164202|ref|YP_008947656.1|	-	0.0044	15.9	0.1	0.0092	14.8	0.0	1.6	1	0	0	1	1	1	1	HpcH/HpaI	aldolase/citrate	lyase	family
DUF2299	PF10061.4	gi|568164203|ref|YP_008947657.1|	-	1.9e-54	182.8	0.0	2.1e-54	182.6	0.0	1.0	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2299)
Methyltransf_11	PF08241.7	gi|568164204|ref|YP_008947659.1|	-	4.5e-17	62.3	0.0	7.9e-17	61.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|568164204|ref|YP_008947659.1|	-	2.5e-11	43.3	0.1	5.7e-11	42.2	0.1	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|568164204|ref|YP_008947659.1|	-	4.6e-08	32.9	0.0	7.9e-08	32.1	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_8	PF05148.10	gi|568164204|ref|YP_008947659.1|	-	1.9e-07	30.9	0.0	3e-07	30.3	0.0	1.3	1	0	0	1	1	1	1	Hypothetical	methyltransferase
Methyltransf_12	PF08242.7	gi|568164204|ref|YP_008947659.1|	-	4e-07	30.4	0.0	7.4e-07	29.5	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|568164204|ref|YP_008947659.1|	-	9.1e-06	25.9	0.1	1.5e-05	25.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|568164204|ref|YP_008947659.1|	-	2.8e-05	23.3	0.0	0.00016	20.8	0.0	1.9	2	0	0	2	2	2	1	ubiE/COQ5	methyltransferase	family
Methyltransf_9	PF08003.6	gi|568164204|ref|YP_008947659.1|	-	0.0014	17.3	0.0	0.002	16.8	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1698)
Methyltransf_18	PF12847.2	gi|568164204|ref|YP_008947659.1|	-	0.0047	17.4	0.4	0.032	14.7	0.3	2.0	1	1	0	1	1	1	1	Methyltransferase	domain
MetW	PF07021.7	gi|568164204|ref|YP_008947659.1|	-	0.015	14.7	0.0	0.021	14.2	0.0	1.1	1	0	0	1	1	1	0	Methionine	biosynthesis	protein	MetW
CMAS	PF02353.15	gi|568164204|ref|YP_008947659.1|	-	0.071	12.1	0.0	0.12	11.3	0.0	1.4	1	1	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
Methyltransf_7	PF03492.10	gi|568164204|ref|YP_008947659.1|	-	0.12	11.1	0.1	0.49	9.1	0.0	1.8	2	0	0	2	2	2	0	SAM	dependent	carboxyl	methyltransferase
ThiS	PF02597.15	gi|568164205|ref|YP_008947660.1|	-	1.1e-06	28.9	0.2	1.2e-06	28.7	0.2	1.1	1	0	0	1	1	1	1	ThiS	family
ThiS-like	PF14453.1	gi|568164205|ref|YP_008947660.1|	-	0.0027	17.5	0.1	0.0032	17.2	0.0	1.2	1	0	0	1	1	1	1	ThiS-like	ubiquitin
CRISPR_Cas2	PF09827.4	gi|568164205|ref|YP_008947660.1|	-	0.0066	16.5	0.1	0.007	16.4	0.0	1.3	1	1	0	1	1	1	1	CRISPR	associated	protein	Cas2
TOBE_3	PF12857.2	gi|568164205|ref|YP_008947660.1|	-	0.0097	15.7	0.6	0.016	15.0	0.2	1.5	2	0	0	2	2	2	1	TOBE-like	domain
Clathrin_lg_ch	PF01086.12	gi|568164206|ref|YP_008947661.1|	-	0.14	12.0	4.7	0.1	12.5	0.9	2.2	2	0	0	2	2	2	0	Clathrin	light	chain
DAO	PF01266.19	gi|568164207|ref|YP_008947662.1|	-	7.9e-34	117.1	0.0	1.1e-33	116.5	0.0	1.2	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
NAD_binding_8	PF13450.1	gi|568164207|ref|YP_008947662.1|	-	2.4e-07	30.6	0.2	5.8e-07	29.4	0.1	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_3	PF01494.14	gi|568164207|ref|YP_008947662.1|	-	2.1e-05	23.7	0.0	2.6e-05	23.4	0.0	1.1	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox_2	PF07992.9	gi|568164207|ref|YP_008947662.1|	-	4.6e-05	23.3	0.2	0.00028	20.8	0.1	2.1	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
ApbA	PF02558.11	gi|568164207|ref|YP_008947662.1|	-	0.00014	21.3	0.2	0.00026	20.4	0.2	1.4	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
Pyr_redox	PF00070.22	gi|568164207|ref|YP_008947662.1|	-	0.00015	22.1	4.4	0.002	18.5	0.2	3.6	4	0	0	4	4	4	1	Pyridine	nucleotide-disulphide	oxidoreductase
3HCDH_N	PF02737.13	gi|568164207|ref|YP_008947662.1|	-	0.0014	18.3	0.2	0.0022	17.7	0.1	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
PMBR	PF09373.5	gi|568164207|ref|YP_008947662.1|	-	0.0017	18.2	1.6	0.0051	16.7	0.0	2.6	2	0	0	2	2	2	1	Pseudomurein-binding	repeat
Thi4	PF01946.12	gi|568164207|ref|YP_008947662.1|	-	0.0038	16.3	0.3	0.0058	15.7	0.2	1.3	1	0	0	1	1	1	1	Thi4	family
NAD_Gly3P_dh_N	PF01210.18	gi|568164207|ref|YP_008947662.1|	-	0.0057	16.4	0.0	0.01	15.5	0.0	1.4	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
UDPG_MGDP_dh_N	PF03721.9	gi|568164207|ref|YP_008947662.1|	-	0.016	14.5	0.4	0.037	13.4	0.3	1.6	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Trp_halogenase	PF04820.9	gi|568164207|ref|YP_008947662.1|	-	0.019	13.5	0.4	0.027	13.0	0.3	1.2	1	0	0	1	1	1	0	Tryptophan	halogenase
NAD_binding_9	PF13454.1	gi|568164207|ref|YP_008947662.1|	-	0.028	14.2	0.6	0.065	13.0	0.3	1.7	2	0	0	2	2	2	0	FAD-NAD(P)-binding
ThiF	PF00899.16	gi|568164207|ref|YP_008947662.1|	-	0.055	13.2	0.4	0.13	12.0	0.1	1.8	2	0	0	2	2	2	0	ThiF	family
Shikimate_DH	PF01488.15	gi|568164207|ref|YP_008947662.1|	-	0.069	13.2	0.1	3.6	7.7	0.1	2.3	2	0	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
FAD_binding_2	PF00890.19	gi|568164207|ref|YP_008947662.1|	-	0.091	11.5	0.1	0.15	10.8	0.0	1.3	1	0	0	1	1	1	0	FAD	binding	domain
DUF1955	PF09205.5	gi|568164208|ref|YP_008947663.1|	-	4.3e-76	253.9	7.4	4.9e-76	253.7	5.1	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1955)
DUF3366	PF11846.3	gi|568164208|ref|YP_008947663.1|	-	0.068	13.0	0.0	0.095	12.5	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3366)
DUF790	PF05626.6	gi|568164209|ref|YP_008947664.1|	-	1.5e-118	395.6	11.7	2e-118	395.2	8.1	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF790)
HHH_4	PF14490.1	gi|568164209|ref|YP_008947664.1|	-	0.096	12.4	0.8	0.3	10.8	0.1	2.2	2	0	0	2	2	2	0	Helix-hairpin-helix	containing	domain
PG_binding_4	PF12229.3	gi|568164209|ref|YP_008947664.1|	-	0.51	10.5	0.0	0.51	10.5	0.0	3.6	4	1	0	4	4	4	0	Putative	peptidoglycan	binding	domain
ResIII	PF04851.10	gi|568164210|ref|YP_008947665.1|	-	1.6e-24	86.7	0.0	2.8e-23	82.6	0.0	2.5	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.26	gi|568164210|ref|YP_008947665.1|	-	2.3e-17	62.6	0.1	5e-17	61.5	0.0	1.6	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
DEAD	PF00270.24	gi|568164210|ref|YP_008947665.1|	-	4.8e-13	48.9	0.0	1.4e-12	47.3	0.0	1.8	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
SNF2_N	PF00176.18	gi|568164210|ref|YP_008947665.1|	-	6.1e-12	44.9	0.6	7e-10	38.1	0.0	2.6	1	1	1	2	2	2	2	SNF2	family	N-terminal	domain
AAA_22	PF13401.1	gi|568164210|ref|YP_008947665.1|	-	0.0029	17.7	0.5	0.079	13.0	0.0	2.7	2	1	1	3	3	3	1	AAA	domain
Helicase_C_2	PF13307.1	gi|568164210|ref|YP_008947665.1|	-	0.0031	17.4	1.0	0.21	11.5	0.0	3.3	2	2	1	4	4	4	1	Helicase	C-terminal	domain
AAA_10	PF12846.2	gi|568164210|ref|YP_008947665.1|	-	0.0045	16.4	0.6	1.1	8.5	0.0	2.5	2	1	1	3	3	3	2	AAA-like	domain
FTA4	PF13093.1	gi|568164210|ref|YP_008947665.1|	-	0.055	12.8	0.3	0.11	11.8	0.2	1.6	1	1	0	1	1	1	0	Kinetochore	complex	Fta4	of	Sim4	subunit,	or	CENP-50
HTH_24	PF13412.1	gi|568164211|ref|YP_008947666.1|	-	3.7e-28	96.6	5.9	1.1e-17	63.1	0.1	2.3	2	0	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|568164211|ref|YP_008947666.1|	-	5.6e-19	67.4	0.0	9.7e-11	41.0	0.0	2.3	2	0	0	2	2	2	2	AsnC-type	helix-turn-helix	domain
TrmB	PF01978.14	gi|568164211|ref|YP_008947666.1|	-	4.6e-09	35.8	1.0	0.0041	16.7	0.0	2.9	3	0	0	3	3	3	2	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|568164211|ref|YP_008947666.1|	-	4.7e-07	29.3	0.0	0.015	14.9	0.0	2.3	2	0	0	2	2	2	2	MarR	family
HTH_Mga	PF08280.6	gi|568164211|ref|YP_008947666.1|	-	1.1e-06	28.2	0.1	0.0028	17.3	0.0	2.7	2	0	0	2	2	2	2	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
MarR	PF01047.17	gi|568164211|ref|YP_008947666.1|	-	9.3e-06	25.2	0.1	0.057	13.1	0.0	2.4	2	0	0	2	2	2	2	MarR	family
Rrf2	PF02082.15	gi|568164211|ref|YP_008947666.1|	-	0.00046	20.2	0.2	0.41	10.8	0.0	2.3	2	0	0	2	2	2	2	Transcriptional	regulator
HTH_9	PF08221.6	gi|568164211|ref|YP_008947666.1|	-	0.00065	19.5	0.3	1.4	8.8	0.1	2.4	2	0	0	2	2	2	2	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
TFIIE_alpha	PF02002.12	gi|568164211|ref|YP_008947666.1|	-	0.001	18.5	1.0	0.22	11.0	0.0	2.4	2	0	0	2	2	2	1	TFIIE	alpha	subunit
HTH_20	PF12840.2	gi|568164211|ref|YP_008947666.1|	-	0.0011	18.7	0.0	2	8.2	0.0	2.4	2	0	0	2	2	2	2	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|568164211|ref|YP_008947666.1|	-	0.0011	18.5	0.0	0.95	9.1	0.0	2.3	2	0	0	2	2	2	2	Bacterial	regulatory	protein,	arsR	family
HTH_11	PF08279.7	gi|568164211|ref|YP_008947666.1|	-	0.0017	17.9	1.0	0.25	11.0	0.2	2.4	2	0	0	2	2	2	1	HTH	domain
Mga	PF05043.8	gi|568164211|ref|YP_008947666.1|	-	0.0017	18.6	0.1	0.95	9.7	0.1	2.5	2	0	0	2	2	2	1	Mga	helix-turn-helix	domain
B-block_TFIIIC	PF04182.7	gi|568164211|ref|YP_008947666.1|	-	0.0037	17.0	0.4	0.11	12.3	0.0	2.3	2	0	0	2	2	2	1	B-block	binding	subunit	of	TFIIIC
HTH_34	PF13601.1	gi|568164211|ref|YP_008947666.1|	-	0.0039	17.1	0.1	0.15	12.0	0.0	2.4	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
LexA_DNA_bind	PF01726.11	gi|568164211|ref|YP_008947666.1|	-	0.0044	16.5	0.1	0.55	9.8	0.0	2.4	2	0	0	2	2	2	1	LexA	DNA	binding	domain
HTH_23	PF13384.1	gi|568164211|ref|YP_008947666.1|	-	0.0067	16.0	0.0	0.44	10.2	0.0	2.3	2	0	0	2	2	2	1	Homeodomain-like	domain
HTH_45	PF14947.1	gi|568164211|ref|YP_008947666.1|	-	0.018	14.8	1.9	1.4	8.7	0.2	2.5	2	0	0	2	2	2	0	Winged	helix-turn-helix
Sigma70_r4_2	PF08281.7	gi|568164211|ref|YP_008947666.1|	-	0.096	12.1	0.1	2	7.9	0.0	2.2	2	0	0	2	2	2	0	Sigma-70,	region	4
NPCC	PF08058.6	gi|568164212|ref|YP_008947667.1|	-	0.13	12.0	1.4	0.23	11.2	1.0	1.5	1	0	0	1	1	1	0	Nuclear	pore	complex	component
Rdx	PF10262.4	gi|568164892|ref|YP_008947668.1|	-	0.066	13.2	0.1	0.08	12.9	0.1	1.4	1	1	0	1	1	1	0	Rdx	family
ECF-ribofla_trS	PF07155.7	gi|568164892|ref|YP_008947668.1|	-	0.39	10.4	3.8	0.3	10.7	0.9	1.9	1	1	1	2	2	2	0	ECF-type	riboflavin	transporter,	S	component
Peptidase_M32	PF02074.10	gi|568164213|ref|YP_008947669.1|	-	5e-156	520.1	6.0	5.6e-156	520.0	4.2	1.0	1	0	0	1	1	1	1	Carboxypeptidase	Taq	(M32)	metallopeptidase
MMPL	PF03176.10	gi|568164214|ref|YP_008947670.1|	-	2.9e-65	220.1	20.2	5.2e-35	120.7	5.2	2.6	3	0	0	3	3	3	2	MMPL	family
FlxA	PF14282.1	gi|568164214|ref|YP_008947670.1|	-	0.0092	15.9	2.1	0.02	14.8	1.5	1.5	1	0	0	1	1	1	1	FlxA-like	protein
Methyltransf_11	PF08241.7	gi|568164215|ref|YP_008947671.1|	-	2.6e-09	37.4	0.0	5.4e-09	36.4	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_8	PF05148.10	gi|568164215|ref|YP_008947671.1|	-	0.00027	20.6	0.0	0.00031	20.4	0.0	1.2	1	0	0	1	1	1	1	Hypothetical	methyltransferase
Methyltransf_23	PF13489.1	gi|568164215|ref|YP_008947671.1|	-	0.048	13.3	0.0	0.066	12.9	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
FtsJ	PF01728.14	gi|568164215|ref|YP_008947671.1|	-	0.063	13.2	0.0	0.084	12.8	0.0	1.3	1	0	0	1	1	1	0	FtsJ-like	methyltransferase
ABC1	PF03109.11	gi|568164216|ref|YP_008947672.1|	-	5.7e-23	81.1	0.0	1.1e-22	80.1	0.0	1.5	1	0	0	1	1	1	1	ABC1	family
RIO1	PF01163.17	gi|568164216|ref|YP_008947672.1|	-	4.7e-06	26.0	1.0	1.5e-05	24.4	0.0	2.2	3	0	0	3	3	3	1	RIO1	family
Pkinase	PF00069.20	gi|568164216|ref|YP_008947672.1|	-	0.00017	20.8	0.3	0.0017	17.5	0.2	2.1	1	1	0	1	1	1	1	Protein	kinase	domain
APH	PF01636.18	gi|568164216|ref|YP_008947672.1|	-	0.035	13.8	0.0	0.21	11.3	0.0	2.1	2	0	0	2	2	2	0	Phosphotransferase	enzyme	family
HSP20	PF00011.16	gi|568164217|ref|YP_008947673.1|	-	3.7e-09	36.3	0.0	4.6e-09	36.0	0.0	1.1	1	0	0	1	1	1	1	Hsp20/alpha	crystallin	family
CCG	PF02754.11	gi|568164218|ref|YP_008947674.1|	-	8.8e-11	41.6	0.0	4.2e-08	33.0	0.1	2.6	2	0	0	2	2	2	2	Cysteine-rich	domain
DUF162	PF02589.10	gi|568164219|ref|YP_008947675.1|	-	6.8e-53	178.9	0.4	9.2e-53	178.5	0.3	1.2	1	0	0	1	1	1	1	Uncharacterised	ACR,	YkgG	family	COG1556
Fer4_8	PF13183.1	gi|568164219|ref|YP_008947675.1|	-	3.3e-10	39.8	4.5	5.3e-10	39.1	3.1	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|568164219|ref|YP_008947675.1|	-	5.7e-08	33.0	2.0	0.0039	17.5	0.1	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|568164219|ref|YP_008947675.1|	-	4.4e-06	26.9	5.4	8.3e-06	26.0	3.7	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|568164219|ref|YP_008947675.1|	-	1.1e-05	25.6	5.5	3.4e-05	24.1	3.9	1.7	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|568164219|ref|YP_008947675.1|	-	2.6e-05	23.9	6.4	0.00042	20.0	5.2	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|568164219|ref|YP_008947675.1|	-	0.00036	19.9	8.6	0.0016	17.9	1.3	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|568164219|ref|YP_008947675.1|	-	0.0005	20.2	7.6	0.017	15.3	6.2	2.2	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_20	PF14691.1	gi|568164219|ref|YP_008947675.1|	-	0.0012	18.4	1.6	0.088	12.4	0.1	2.5	2	0	0	2	2	2	1	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_6	PF12837.2	gi|568164219|ref|YP_008947675.1|	-	0.0042	16.8	10.1	0.013	15.3	1.9	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|568164219|ref|YP_008947675.1|	-	0.0063	16.3	5.5	0.024	14.4	3.8	1.9	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|568164219|ref|YP_008947675.1|	-	0.0077	16.1	6.0	0.065	13.1	0.7	2.4	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|568164219|ref|YP_008947675.1|	-	0.01	16.5	7.3	0.04	14.6	5.1	2.0	1	1	0	1	1	1	0	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.2	gi|568164219|ref|YP_008947675.1|	-	0.061	13.6	8.3	0.093	13.1	1.0	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
NAGLU_N	PF12971.2	gi|568164219|ref|YP_008947675.1|	-	0.075	12.7	0.0	1.3	8.7	0.0	2.6	3	0	0	3	3	3	0	Alpha-N-acetylglucosaminidase	(NAGLU)	N-terminal	domain
Fer4_3	PF12798.2	gi|568164219|ref|YP_008947675.1|	-	1.8	9.3	12.3	8.9	7.1	0.5	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Pex14_N	PF04695.8	gi|568164893|ref|YP_008947676.1|	-	0.021	14.8	7.2	0.067	13.2	5.0	1.8	1	0	0	1	1	1	0	Peroxisomal	membrane	anchor	protein	(Pex14p)	conserved	region
DNA_pol3_beta	PF00712.14	gi|568164893|ref|YP_008947676.1|	-	0.32	10.9	4.7	0.29	11.0	1.1	2.6	2	1	0	2	2	2	0	DNA	polymerase	III	beta	subunit,	N-terminal	domain
Rifin_STEVOR	PF02009.11	gi|568164893|ref|YP_008947676.1|	-	0.48	10.0	8.0	0.066	12.8	2.1	2.2	2	1	0	2	2	2	0	Rifin/stevor	family
Golgin_A5	PF09787.4	gi|568164893|ref|YP_008947676.1|	-	4.3	5.7	6.2	7.7	4.9	4.3	1.3	1	0	0	1	1	1	0	Golgin	subfamily	A	member	5
MFS_1	PF07690.11	gi|568164220|ref|YP_008947677.1|	-	6.3e-39	133.6	96.8	1.1e-26	93.4	20.7	3.2	1	1	2	3	3	3	3	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|568164220|ref|YP_008947677.1|	-	1.1e-10	40.6	36.1	2.9e-07	29.4	10.8	3.9	3	1	0	3	3	3	3	Sugar	(and	other)	transporter
MFS_3	PF05977.8	gi|568164220|ref|YP_008947677.1|	-	6.9e-05	21.1	2.6	6.9e-05	21.1	1.8	2.2	2	0	0	2	2	2	1	Transmembrane	secretion	effector
PUCC	PF03209.10	gi|568164220|ref|YP_008947677.1|	-	0.00022	20.0	4.1	0.00022	20.0	2.8	2.5	2	0	0	2	2	2	1	PUCC	protein
DUF2583	PF10762.4	gi|568164220|ref|YP_008947677.1|	-	2.3	8.4	13.2	0.43	10.7	0.7	4.0	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF2583)
MarR	PF01047.17	gi|568164221|ref|YP_008947678.1|	-	2.4e-14	52.7	0.4	4.6e-14	51.8	0.1	1.7	2	0	0	2	2	2	1	MarR	family
HTH_27	PF13463.1	gi|568164221|ref|YP_008947678.1|	-	2.6e-14	53.3	0.2	5.3e-14	52.3	0.1	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|568164221|ref|YP_008947678.1|	-	1.9e-11	43.4	0.0	2.9e-11	42.8	0.0	1.3	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|568164221|ref|YP_008947678.1|	-	9.5e-09	34.8	0.8	1.7e-08	34.0	0.6	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_34	PF13601.1	gi|568164221|ref|YP_008947678.1|	-	3.4e-07	30.1	0.5	5.6e-07	29.5	0.3	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_5	PF01022.15	gi|568164221|ref|YP_008947678.1|	-	7.9e-07	28.6	0.6	1.7e-06	27.5	0.1	1.8	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	arsR	family
HTH_45	PF14947.1	gi|568164221|ref|YP_008947678.1|	-	3.5e-05	23.5	3.9	0.00012	21.8	2.5	2.0	1	1	1	2	2	2	1	Winged	helix-turn-helix
Fe_dep_repress	PF01325.14	gi|568164221|ref|YP_008947678.1|	-	0.0001	22.1	0.4	0.00019	21.2	0.3	1.5	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DUF4423	PF14394.1	gi|568164221|ref|YP_008947678.1|	-	0.00021	20.8	0.6	0.00027	20.5	0.4	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
HTH_24	PF13412.1	gi|568164221|ref|YP_008947678.1|	-	0.00097	18.4	0.0	0.0031	16.8	0.0	2.0	1	1	1	2	2	2	1	Winged	helix-turn-helix	DNA-binding
DUF3116	PF11313.3	gi|568164221|ref|YP_008947678.1|	-	0.0042	16.6	2.2	0.018	14.6	0.2	2.4	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF3116)
HTH_IclR	PF09339.5	gi|568164221|ref|YP_008947678.1|	-	0.005	16.3	0.0	0.011	15.2	0.0	1.6	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
PadR	PF03551.9	gi|568164221|ref|YP_008947678.1|	-	0.0062	16.2	0.0	0.012	15.3	0.0	1.6	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
DUF2250	PF10007.4	gi|568164221|ref|YP_008947678.1|	-	0.0066	16.3	1.3	0.011	15.6	0.8	1.6	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_36	PF13730.1	gi|568164221|ref|YP_008947678.1|	-	0.008	16.2	0.0	0.016	15.3	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|568164221|ref|YP_008947678.1|	-	0.011	15.7	0.1	0.027	14.6	0.1	1.5	1	0	0	1	1	1	0	Transcriptional	regulator
HTH_20	PF12840.2	gi|568164221|ref|YP_008947678.1|	-	0.013	15.2	0.0	0.027	14.2	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
HxlR	PF01638.12	gi|568164221|ref|YP_008947678.1|	-	0.015	14.9	0.6	0.025	14.1	0.4	1.4	1	0	0	1	1	1	0	HxlR-like	helix-turn-helix
DUF3452	PF11934.3	gi|568164221|ref|YP_008947678.1|	-	0.029	13.7	0.4	0.038	13.3	0.3	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3452)
Ead_Ea22	PF13935.1	gi|568164221|ref|YP_008947678.1|	-	0.04	14.2	0.3	0.11	12.8	0.0	1.8	1	1	1	2	2	2	0	Ead/Ea22-like	protein
RuvB_C	PF05491.8	gi|568164221|ref|YP_008947678.1|	-	0.049	13.2	0.1	0.11	12.0	0.1	1.6	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	ruvB	C-terminus
DUF4303	PF14136.1	gi|568164221|ref|YP_008947678.1|	-	0.076	12.6	0.1	0.12	11.9	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4303)
B-block_TFIIIC	PF04182.7	gi|568164221|ref|YP_008947678.1|	-	0.078	12.8	0.2	0.17	11.7	0.1	1.5	1	1	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
Staphostatin_A	PF09022.5	gi|568164221|ref|YP_008947678.1|	-	0.081	12.7	2.3	0.12	12.1	1.3	1.5	1	1	0	1	1	1	0	Staphostatin	A
HTH_29	PF13551.1	gi|568164221|ref|YP_008947678.1|	-	0.11	12.6	0.0	0.19	11.8	0.0	1.5	1	0	0	1	1	1	0	Winged	helix-turn	helix
dUTPase	PF00692.14	gi|568164222|ref|YP_008947680.1|	-	1.1e-07	31.3	0.0	1.9e-07	30.6	0.0	1.3	1	0	0	1	1	1	1	dUTPase
DUF4307	PF14155.1	gi|568164895|ref|YP_008947681.1|	-	0.074	12.8	0.2	0.22	11.2	0.1	1.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4307)
SGL	PF08450.7	gi|568164223|ref|YP_008947682.1|	-	1.1e-76	257.4	0.0	1.3e-76	257.2	0.0	1.0	1	0	0	1	1	1	1	SMP-30/Gluconolaconase/LRE-like	region
Reg_prop	PF07494.6	gi|568164223|ref|YP_008947682.1|	-	0.00097	18.8	0.4	1.2	9.3	0.0	3.5	3	0	0	3	3	3	2	Two	component	regulator	propeller
Str_synth	PF03088.11	gi|568164223|ref|YP_008947682.1|	-	0.0076	16.2	0.0	0.026	14.5	0.0	1.9	1	0	0	1	1	1	1	Strictosidine	synthase
NHL	PF01436.16	gi|568164223|ref|YP_008947682.1|	-	0.078	12.9	0.0	6.6	6.8	0.0	3.5	3	0	0	3	3	3	0	NHL	repeat
Arylesterase	PF01731.15	gi|568164223|ref|YP_008947682.1|	-	0.1	12.6	0.0	0.24	11.4	0.0	1.7	1	0	0	1	1	1	0	Arylesterase
MRJP	PF03022.11	gi|568164223|ref|YP_008947682.1|	-	0.11	11.7	0.0	0.46	9.6	0.0	2.0	1	1	1	2	2	2	0	Major	royal	jelly	protein
Peptidase_M48	PF01435.13	gi|568164896|ref|YP_008947683.1|	-	1.1e-21	77.5	0.0	2.3e-21	76.4	0.0	1.5	1	1	0	1	1	1	1	Peptidase	family	M48
Peptidase_M56	PF05569.6	gi|568164896|ref|YP_008947683.1|	-	2.2e-07	30.1	4.0	2.2e-07	30.1	2.8	1.4	1	1	0	1	1	1	1	BlaR1	peptidase	M56
DUF3708	PF12501.3	gi|568164896|ref|YP_008947683.1|	-	0.095	12.5	0.1	0.17	11.7	0.1	1.3	1	0	0	1	1	1	0	Phosphate	ATP-binding	cassette	transporter
Pex24p	PF06398.6	gi|568164896|ref|YP_008947683.1|	-	0.13	11.0	7.8	0.27	9.9	5.4	1.5	2	0	0	2	2	2	0	Integral	peroxisomal	membrane	peroxin
tRNA_m1G_MT	PF01746.16	gi|568164224|ref|YP_008947685.1|	-	6.9e-11	42.0	0.1	3.5e-09	36.5	0.1	2.2	1	1	1	2	2	2	2	tRNA	(Guanine-1)-methyltransferase
Peptidase_S9	PF00326.16	gi|568164225|ref|YP_008947687.1|	-	3.4e-50	170.2	0.1	4.6e-50	169.7	0.1	1.2	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
Abhydrolase_5	PF12695.2	gi|568164225|ref|YP_008947687.1|	-	6.6e-11	42.1	0.0	1.1e-10	41.3	0.0	1.4	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_6	PF12697.2	gi|568164225|ref|YP_008947687.1|	-	3.7e-09	36.7	0.0	3.1e-08	33.7	0.0	2.1	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Peptidase_S15	PF02129.13	gi|568164225|ref|YP_008947687.1|	-	5.9e-08	32.4	0.4	2e-05	24.1	0.5	2.3	1	1	1	2	2	2	2	X-Pro	dipeptidyl-peptidase	(S15	family)
DPPIV_N	PF00930.16	gi|568164225|ref|YP_008947687.1|	-	9e-06	24.4	0.0	0.00063	18.4	0.0	2.5	3	0	0	3	3	3	1	Dipeptidyl	peptidase	IV	(DPP	IV)	N-terminal	region
DLH	PF01738.13	gi|568164225|ref|YP_008947687.1|	-	0.00019	20.7	0.0	0.00072	18.9	0.0	1.8	1	1	0	1	1	1	1	Dienelactone	hydrolase	family
FSH1	PF03959.8	gi|568164225|ref|YP_008947687.1|	-	0.015	14.7	0.0	0.028	13.8	0.0	1.4	1	0	0	1	1	1	0	Serine	hydrolase	(FSH1)
Abhydrolase_2	PF02230.11	gi|568164225|ref|YP_008947687.1|	-	0.16	11.4	0.1	0.35	10.2	0.0	1.5	2	0	0	2	2	2	0	Phospholipase/Carboxylesterase
DUF3651	PF12371.3	gi|568164226|ref|YP_008947689.1|	-	4.4	7.3	7.6	3.6	7.6	1.8	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3651)
DUF3827	PF12877.2	gi|568164227|ref|YP_008947690.1|	-	0.17	9.9	1.8	0.25	9.3	1.2	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3827)
ODV-E18	PF10717.4	gi|568164228|ref|YP_008947691.1|	-	0.028	13.8	0.4	0.087	12.2	0.3	1.9	1	0	0	1	1	1	0	Occlusion-derived	virus	envelope	protein	ODV-E18
DUF4399	PF14347.1	gi|568164228|ref|YP_008947691.1|	-	0.073	13.0	0.1	6	6.9	0.0	3.1	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4399)
PepSY	PF03413.14	gi|568164229|ref|YP_008947692.1|	-	0.16	12.6	1.9	16	6.2	0.0	2.9	2	0	0	2	2	2	0	Peptidase	propeptide	and	YPEB	domain
Cuticle_1	PF08140.6	gi|568164230|ref|YP_008947693.1|	-	0.055	13.3	0.0	0.12	12.2	0.0	1.5	1	0	0	1	1	1	0	Crustacean	cuticle	protein	repeat
DUF998	PF06197.8	gi|568164231|ref|YP_008947694.1|	-	9.9e-31	106.4	19.6	1.1e-30	106.3	13.6	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF998)
Pox_A14	PF05767.7	gi|568164232|ref|YP_008947695.1|	-	9.6	6.2	7.7	6.5	6.7	0.9	2.5	2	0	0	2	2	2	0	Poxvirus	virion	envelope	protein	A14
ADH_N	PF08240.7	gi|568164233|ref|YP_008947696.1|	-	2.1e-27	95.0	3.5	2.2e-27	94.9	0.2	2.3	2	0	0	2	2	2	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|568164233|ref|YP_008947696.1|	-	5.1e-23	81.0	1.9	9.1e-23	80.2	0.1	2.2	3	0	0	3	3	3	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|568164233|ref|YP_008947696.1|	-	1.4e-05	26.0	0.0	2.6e-05	25.1	0.0	1.5	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
NAD_binding_10	PF13460.1	gi|568164233|ref|YP_008947696.1|	-	0.00036	20.5	0.1	0.00057	19.9	0.0	1.3	1	0	0	1	1	1	1	NADH(P)-binding
SIS_2	PF13580.1	gi|568164233|ref|YP_008947696.1|	-	0.003	17.2	0.0	0.014	15.1	0.0	2.1	2	0	0	2	2	2	1	SIS	domain
TrkA_C	PF02080.16	gi|568164233|ref|YP_008947696.1|	-	0.0054	16.2	0.1	37	3.9	0.0	4.4	4	1	1	5	5	5	0	TrkA-C	domain
Pyr_redox	PF00070.22	gi|568164233|ref|YP_008947696.1|	-	0.019	15.3	0.1	10	6.5	0.0	2.6	2	1	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
NmrA	PF05368.8	gi|568164233|ref|YP_008947696.1|	-	0.021	14.1	0.1	0.031	13.5	0.1	1.3	1	0	0	1	1	1	0	NmrA-like	family
ELFV_dehydrog	PF00208.16	gi|568164233|ref|YP_008947696.1|	-	0.027	14.0	0.2	0.04	13.4	0.1	1.3	1	0	0	1	1	1	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
AlaDh_PNT_C	PF01262.16	gi|568164233|ref|YP_008947696.1|	-	0.044	13.3	0.1	0.077	12.5	0.1	1.4	1	0	0	1	1	1	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
2-Hacid_dh_C	PF02826.14	gi|568164233|ref|YP_008947696.1|	-	0.11	11.6	0.0	0.19	10.8	0.0	1.4	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Peptidase_M19	PF01244.16	gi|568164234|ref|YP_008947697.1|	-	3.6e-72	243.0	0.0	4.1e-72	242.8	0.0	1.0	1	0	0	1	1	1	1	Membrane	dipeptidase	(Peptidase	family	M19)
HMA	PF00403.21	gi|568164235|ref|YP_008947698.1|	-	1.7e-11	44.0	0.1	2.4e-11	43.6	0.0	1.2	1	0	0	1	1	1	1	Heavy-metal-associated	domain
Na_Ca_ex	PF01699.19	gi|568164236|ref|YP_008947699.1|	-	5.3e-34	116.8	28.7	1.4e-19	70.1	8.1	2.1	2	0	0	2	2	2	2	Sodium/calcium	exchanger	protein
Pkinase	PF00069.20	gi|568164900|ref|YP_008947700.1|	-	1e-39	136.2	0.1	1.4e-39	135.8	0.0	1.1	1	0	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|568164900|ref|YP_008947700.1|	-	2e-19	69.6	0.0	1.4e-18	66.8	0.0	2.2	1	1	0	1	1	1	1	Protein	tyrosine	kinase
Kinase-like	PF14531.1	gi|568164900|ref|YP_008947700.1|	-	4.1e-06	25.9	0.0	1.3e-05	24.3	0.0	1.7	2	0	0	2	2	2	1	Kinase-like
Kdo	PF06293.9	gi|568164900|ref|YP_008947700.1|	-	0.03	13.3	0.0	0.049	12.6	0.0	1.2	1	0	0	1	1	1	0	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
DUF1626	PF07788.6	gi|568164237|ref|YP_008947701.1|	-	0.002	17.8	0.2	0.0032	17.2	0.2	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1626)
DUF1703	PF08011.6	gi|568164237|ref|YP_008947701.1|	-	0.11	12.2	0.8	0.15	11.8	0.5	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1703)
SapB_1	PF05184.10	gi|568164237|ref|YP_008947701.1|	-	1.1	9.1	3.2	0.63	9.9	0.6	1.8	2	0	0	2	2	2	0	Saposin-like	type	B,	region	1
MFS_1	PF07690.11	gi|568164238|ref|YP_008947702.1|	-	9.5e-30	103.4	48.9	9.3e-21	73.9	14.6	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
ABC2_membrane	PF01061.19	gi|568164239|ref|YP_008947703.1|	-	7.1e-13	48.2	37.0	7.1e-13	48.2	25.6	1.8	1	1	1	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.2	gi|568164239|ref|YP_008947703.1|	-	1.7e-07	30.5	36.7	1.7e-07	30.5	25.4	2.1	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
ABC_tran	PF00005.22	gi|568164240|ref|YP_008947704.1|	-	1.4e-31	109.6	0.0	2.3e-31	108.9	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|568164240|ref|YP_008947704.1|	-	2.9e-15	57.0	0.5	1.3e-10	41.7	0.0	2.4	3	0	0	3	3	2	2	AAA	domain
AAA_15	PF13175.1	gi|568164240|ref|YP_008947704.1|	-	2.8e-08	33.2	0.0	0.00033	19.8	0.0	2.2	1	1	1	2	2	2	2	AAA	ATPase	domain
UPF0079	PF02367.12	gi|568164240|ref|YP_008947704.1|	-	2.8e-05	23.7	0.0	0.00011	21.8	0.0	1.9	2	0	0	2	2	2	1	Uncharacterised	P-loop	hydrolase	UPF0079
SMC_N	PF02463.14	gi|568164240|ref|YP_008947704.1|	-	5.9e-05	22.4	0.1	0.26	10.4	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_22	PF13401.1	gi|568164240|ref|YP_008947704.1|	-	6e-05	23.2	0.4	0.00033	20.7	0.3	2.1	2	1	0	2	2	1	1	AAA	domain
AAA_16	PF13191.1	gi|568164240|ref|YP_008947704.1|	-	9.5e-05	22.4	0.0	0.00029	20.8	0.0	1.8	1	1	0	1	1	1	1	AAA	ATPase	domain
IstB_IS21	PF01695.12	gi|568164240|ref|YP_008947704.1|	-	0.00012	21.5	0.4	1.3	8.3	0.1	3.1	2	1	0	2	2	2	2	IstB-like	ATP	binding	protein
DUF258	PF03193.11	gi|568164240|ref|YP_008947704.1|	-	0.00024	20.3	0.0	0.00044	19.4	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_14	PF13173.1	gi|568164240|ref|YP_008947704.1|	-	0.00027	20.8	0.2	0.0031	17.3	0.1	2.6	1	1	1	2	2	2	1	AAA	domain
AAA_10	PF12846.2	gi|568164240|ref|YP_008947704.1|	-	0.00044	19.7	0.1	0.3	10.4	0.0	2.3	1	1	0	2	2	2	2	AAA-like	domain
AAA_33	PF13671.1	gi|568164240|ref|YP_008947704.1|	-	0.00079	19.3	0.0	0.0027	17.5	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|568164240|ref|YP_008947704.1|	-	0.0015	18.0	0.0	0.0034	16.8	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA	PF00004.24	gi|568164240|ref|YP_008947704.1|	-	0.0019	18.4	0.2	0.0065	16.6	0.1	2.1	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_23	PF13476.1	gi|568164240|ref|YP_008947704.1|	-	0.0028	18.0	1.2	0.0055	17.0	0.8	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_25	PF13481.1	gi|568164240|ref|YP_008947704.1|	-	0.0028	17.0	0.0	0.032	13.6	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
NB-ARC	PF00931.17	gi|568164240|ref|YP_008947704.1|	-	0.0032	16.3	0.3	0.014	14.2	0.0	2.0	2	0	0	2	2	2	1	NB-ARC	domain
AAA_18	PF13238.1	gi|568164240|ref|YP_008947704.1|	-	0.0045	17.2	0.7	0.015	15.6	0.4	2.0	1	1	1	2	2	2	1	AAA	domain
Arch_ATPase	PF01637.13	gi|568164240|ref|YP_008947704.1|	-	0.0049	16.6	1.0	0.021	14.5	0.0	2.2	3	0	0	3	3	2	1	Archaeal	ATPase
AAA_24	PF13479.1	gi|568164240|ref|YP_008947704.1|	-	0.0053	16.3	0.1	0.15	11.6	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
NACHT	PF05729.7	gi|568164240|ref|YP_008947704.1|	-	0.0097	15.5	0.1	0.027	14.1	0.0	1.7	2	0	0	2	2	2	1	NACHT	domain
MutS_V	PF00488.16	gi|568164240|ref|YP_008947704.1|	-	0.015	14.6	0.0	0.11	11.9	0.0	2.0	2	0	0	2	2	2	0	MutS	domain	V
NTPase_1	PF03266.10	gi|568164240|ref|YP_008947704.1|	-	0.017	14.8	0.3	0.37	10.4	0.0	2.6	3	0	0	3	3	3	0	NTPase
Miro	PF08477.8	gi|568164240|ref|YP_008947704.1|	-	0.017	15.6	0.0	0.041	14.3	0.0	1.6	1	0	0	1	1	1	0	Miro-like	protein
AAA_17	PF13207.1	gi|568164240|ref|YP_008947704.1|	-	0.019	15.7	1.6	0.1	13.4	1.1	2.3	1	1	0	1	1	1	0	AAA	domain
AAA_28	PF13521.1	gi|568164240|ref|YP_008947704.1|	-	0.019	14.9	0.1	0.059	13.3	0.0	1.8	1	1	0	1	1	1	0	AAA	domain
AAA_19	PF13245.1	gi|568164240|ref|YP_008947704.1|	-	0.022	14.5	0.0	0.26	11.0	0.0	2.3	2	0	0	2	2	2	0	Part	of	AAA	domain
MobB	PF03205.9	gi|568164240|ref|YP_008947704.1|	-	0.048	13.3	0.1	0.12	12.1	0.0	1.7	2	0	0	2	2	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
PqqD	PF05402.7	gi|568164240|ref|YP_008947704.1|	-	0.055	13.4	0.3	5	7.2	0.0	3.3	4	0	0	4	4	3	0	Coenzyme	PQQ	synthesis	protein	D	(PqqD)
SbcCD_C	PF13558.1	gi|568164240|ref|YP_008947704.1|	-	0.059	13.2	0.0	0.12	12.3	0.0	1.6	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_5	PF07728.9	gi|568164240|ref|YP_008947704.1|	-	0.062	13.0	0.1	0.1	12.3	0.1	1.7	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
AAA_30	PF13604.1	gi|568164240|ref|YP_008947704.1|	-	0.07	12.7	0.0	0.17	11.4	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
cobW	PF02492.14	gi|568164240|ref|YP_008947704.1|	-	0.078	12.4	0.1	0.16	11.4	0.0	1.5	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
PPK2	PF03976.9	gi|568164240|ref|YP_008947704.1|	-	0.11	11.7	0.0	0.19	11.0	0.0	1.4	1	0	0	1	1	1	0	Polyphosphate	kinase	2	(PPK2)
MMR_HSR1	PF01926.18	gi|568164240|ref|YP_008947704.1|	-	0.12	12.3	0.2	0.35	10.8	0.1	1.9	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
Zeta_toxin	PF06414.7	gi|568164240|ref|YP_008947704.1|	-	0.12	11.4	0.0	0.27	10.3	0.0	1.5	1	0	0	1	1	1	0	Zeta	toxin
PduV-EutP	PF10662.4	gi|568164240|ref|YP_008947704.1|	-	0.14	11.6	0.0	0.22	11.0	0.0	1.3	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
RNA_helicase	PF00910.17	gi|568164240|ref|YP_008947704.1|	-	0.16	12.1	0.0	0.4	10.8	0.0	1.7	1	0	0	1	1	1	0	RNA	helicase
Aldedh	PF00171.17	gi|568164241|ref|YP_008947705.1|	-	1.5e-161	537.8	0.0	1.7e-161	537.6	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
LuxC	PF05893.9	gi|568164241|ref|YP_008947705.1|	-	0.13	10.9	0.0	0.21	10.2	0.0	1.6	1	1	0	1	1	1	0	Acyl-CoA	reductase	(LuxC)
Xan_ur_permease	PF00860.15	gi|568164242|ref|YP_008947706.1|	-	3.3e-20	71.9	51.5	9e-19	67.2	35.7	2.2	1	1	0	1	1	1	1	Permease	family
UPF0114	PF03350.11	gi|568164242|ref|YP_008947706.1|	-	0.014	15.2	0.6	0.014	15.2	0.4	3.2	3	1	0	3	3	3	0	Uncharacterized	protein	family,	UPF0114
Pyr_redox_2	PF07992.9	gi|568164243|ref|YP_008947707.1|	-	1.9e-17	63.7	0.0	2.6e-16	60.1	0.0	3.0	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|568164243|ref|YP_008947707.1|	-	2.5e-17	63.0	7.6	7.8e-17	61.4	0.4	2.7	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|568164243|ref|YP_008947707.1|	-	5.5e-06	25.5	3.9	0.029	13.2	0.0	3.9	3	1	1	4	4	4	2	FAD	dependent	oxidoreductase
AlaDh_PNT_C	PF01262.16	gi|568164243|ref|YP_008947707.1|	-	0.00033	20.2	0.0	0.74	9.3	0.0	2.6	3	0	0	3	3	3	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
Pyr_redox_3	PF13738.1	gi|568164243|ref|YP_008947707.1|	-	0.0018	18.3	0.2	0.013	15.5	0.0	2.3	2	1	1	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|568164243|ref|YP_008947707.1|	-	0.0043	17.0	0.1	2.7	8.0	0.0	2.4	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
Oxidored_nitro	PF00148.14	gi|568164243|ref|YP_008947707.1|	-	0.0059	15.3	0.0	0.0092	14.6	0.0	1.3	1	0	0	1	1	1	1	Nitrogenase	component	1	type	Oxidoreductase
HI0933_like	PF03486.9	gi|568164243|ref|YP_008947707.1|	-	0.089	11.2	4.1	2.4	6.5	0.1	3.6	2	2	2	4	4	4	0	HI0933-like	protein
NTP_transferase	PF00483.18	gi|568164244|ref|YP_008947708.1|	-	3e-53	180.6	0.0	3.7e-53	180.3	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
Hexapep	PF00132.19	gi|568164244|ref|YP_008947708.1|	-	3.2e-07	29.5	9.5	0.014	14.8	1.0	5.8	5	1	2	7	7	7	2	Bacterial	transferase	hexapeptide	(six	repeats)
NTP_transf_3	PF12804.2	gi|568164244|ref|YP_008947708.1|	-	1.4e-06	28.4	0.0	2e-06	27.9	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Fucokinase	PF07959.7	gi|568164244|ref|YP_008947708.1|	-	1.8e-05	23.4	1.0	3.3e-05	22.6	0.4	1.5	1	1	0	1	1	1	1	L-fucokinase
Hexapep_2	PF14602.1	gi|568164244|ref|YP_008947708.1|	-	0.007	15.9	0.6	0.007	15.9	0.4	4.6	4	1	0	5	5	5	1	Hexapeptide	repeat	of	succinyl-transferase
Epimerase	PF01370.16	gi|568164245|ref|YP_008947709.1|	-	2.7e-58	197.2	0.0	3.2e-58	196.9	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|568164245|ref|YP_008947709.1|	-	2.3e-23	82.4	0.0	2.8e-23	82.2	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Polysacc_synt_2	PF02719.10	gi|568164245|ref|YP_008947709.1|	-	2.2e-15	56.3	0.9	2.5e-14	52.8	0.6	2.3	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
3Beta_HSD	PF01073.14	gi|568164245|ref|YP_008947709.1|	-	1.2e-14	53.6	0.0	1.7e-14	53.1	0.0	1.1	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
NAD_binding_4	PF07993.7	gi|568164245|ref|YP_008947709.1|	-	1.6e-12	46.8	0.1	2.7e-11	42.8	0.0	2.1	2	0	0	2	2	2	1	Male	sterility	protein
NAD_binding_10	PF13460.1	gi|568164245|ref|YP_008947709.1|	-	4.3e-09	36.6	0.0	7.1e-09	35.9	0.0	1.4	1	1	0	1	1	1	1	NADH(P)-binding
RmlD_sub_bind	PF04321.12	gi|568164246|ref|YP_008947710.1|	-	4.5e-65	219.3	0.0	5e-65	219.2	0.0	1.0	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Epimerase	PF01370.16	gi|568164246|ref|YP_008947710.1|	-	3.5e-13	49.5	0.0	5.4e-13	48.9	0.0	1.4	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
NAD_binding_4	PF07993.7	gi|568164246|ref|YP_008947710.1|	-	1.8e-06	27.0	0.0	2.6e-06	26.5	0.0	1.2	1	0	0	1	1	1	1	Male	sterility	protein
Polysacc_synt_2	PF02719.10	gi|568164246|ref|YP_008947710.1|	-	2.1e-06	26.8	1.9	7.7e-06	25.0	0.2	2.7	1	1	1	2	2	2	1	Polysaccharide	biosynthesis	protein
RNA_pol_Rpb2_2	PF04561.9	gi|568164246|ref|YP_008947710.1|	-	0.079	12.3	0.0	0.13	11.6	0.0	1.3	1	0	0	1	1	1	0	RNA	polymerase	Rpb2,	domain	2
dTDP_sugar_isom	PF00908.12	gi|568164247|ref|YP_008947711.1|	-	2.7e-54	183.1	0.0	3.1e-54	182.9	0.0	1.0	1	0	0	1	1	1	1	dTDP-4-dehydrorhamnose	3,5-epimerase
Cupin_4	PF08007.7	gi|568164247|ref|YP_008947711.1|	-	0.084	12.0	0.0	0.12	11.5	0.0	1.2	1	0	0	1	1	1	0	Cupin	superfamily	protein
Cupin_1	PF00190.17	gi|568164247|ref|YP_008947711.1|	-	0.11	11.9	0.0	0.15	11.5	0.0	1.2	1	0	0	1	1	1	0	Cupin
SBP_bac_11	PF13531.1	gi|568164248|ref|YP_008947712.1|	-	3e-26	92.4	0.4	4e-26	92.0	0.3	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_1	PF01547.20	gi|568164248|ref|YP_008947712.1|	-	3.6e-10	40.0	6.5	5.4e-10	39.5	4.5	1.2	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SoxE	PF06525.6	gi|568164248|ref|YP_008947712.1|	-	0.00017	20.9	3.6	0.00047	19.4	2.5	1.9	1	0	0	1	1	1	1	Sulfocyanin	(SoxE)
DUF1628	PF07790.6	gi|568164248|ref|YP_008947712.1|	-	0.002	18.8	1.2	0.0047	17.6	0.8	1.7	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1628)
Mycobact_memb	PF05423.8	gi|568164248|ref|YP_008947712.1|	-	0.033	13.9	0.1	0.055	13.2	0.1	1.3	1	0	0	1	1	1	0	Mycobacterium	membrane	protein
SpoIIIAH	PF12685.2	gi|568164248|ref|YP_008947712.1|	-	0.14	11.6	0.2	0.23	10.9	0.1	1.4	1	0	0	1	1	1	0	SpoIIIAH-like	protein
SecG	PF03840.9	gi|568164248|ref|YP_008947712.1|	-	0.2	11.4	2.3	0.38	10.5	1.6	1.5	1	0	0	1	1	1	0	Preprotein	translocase	SecG	subunit
Chordopox_A13L	PF05961.6	gi|568164248|ref|YP_008947712.1|	-	0.25	11.3	0.0	0.25	11.3	0.0	2.4	2	0	0	2	2	2	0	Chordopoxvirus	A13L	protein
DUF4293	PF14126.1	gi|568164248|ref|YP_008947712.1|	-	0.55	10.1	3.7	0.3	10.9	0.7	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4293)
Shisa	PF13908.1	gi|568164248|ref|YP_008947712.1|	-	0.99	9.5	3.4	0.21	11.7	0.1	1.6	2	0	0	2	2	1	0	Wnt	and	FGF	inhibitory	regulator
NVEALA	PF14055.1	gi|568164248|ref|YP_008947712.1|	-	1.3	8.7	4.8	0.79	9.4	0.8	2.4	2	0	0	2	2	2	0	NVEALA	protein
Pyr_redox_2	PF07992.9	gi|568164249|ref|YP_008947713.1|	-	2.9e-36	125.2	0.0	2.7e-35	122.0	0.0	2.9	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_dim	PF02852.17	gi|568164249|ref|YP_008947713.1|	-	1.1e-29	102.7	0.1	2e-29	101.7	0.0	1.5	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase,	dimerisation	domain
Pyr_redox	PF00070.22	gi|568164249|ref|YP_008947713.1|	-	2.5e-11	43.8	1.1	4.4e-11	43.0	0.0	2.0	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|568164249|ref|YP_008947713.1|	-	7.7e-09	34.8	7.8	0.00011	21.2	1.0	4.5	4	1	0	4	4	4	2	Glucose	inhibited	division	protein	A
Pyr_redox_3	PF13738.1	gi|568164249|ref|YP_008947713.1|	-	1.3e-07	31.9	0.0	0.00042	20.4	0.0	2.3	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|568164249|ref|YP_008947713.1|	-	0.00015	20.3	0.9	0.34	9.3	0.0	3.1	3	0	0	3	3	3	2	HI0933-like	protein
FAD_binding_2	PF00890.19	gi|568164249|ref|YP_008947713.1|	-	0.0041	16.0	2.2	0.53	9.0	0.0	2.3	2	0	0	2	2	2	2	FAD	binding	domain
NAD_binding_9	PF13454.1	gi|568164249|ref|YP_008947713.1|	-	0.22	11.2	2.1	1.9	8.2	0.1	2.4	2	0	0	2	2	2	0	FAD-NAD(P)-binding
DAO	PF01266.19	gi|568164249|ref|YP_008947713.1|	-	0.8	8.5	4.7	5.1	5.9	0.1	2.4	2	0	0	2	2	2	0	FAD	dependent	oxidoreductase
zf-FCS	PF06467.9	gi|568164250|ref|YP_008947714.1|	-	2.1e-07	30.4	3.9	2.6e-07	30.1	2.7	1.1	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
Arc_trans_TRASH	PF08394.5	gi|568164250|ref|YP_008947714.1|	-	2.1e-05	24.5	5.2	2.9e-05	24.1	3.6	1.2	1	0	0	1	1	1	1	Archaeal	TRASH	domain
YHS	PF04945.8	gi|568164250|ref|YP_008947714.1|	-	4.7e-05	23.1	2.1	6.1e-05	22.7	1.4	1.1	1	0	0	1	1	1	1	YHS	domain
ATPase-cat_bd	PF12156.3	gi|568164250|ref|YP_008947714.1|	-	0.0002	21.8	5.2	0.00024	21.5	3.6	1.1	1	0	0	1	1	1	1	Putative	metal-binding	domain	of	cation	transport	ATPase
Ta0938	PF11494.3	gi|568164250|ref|YP_008947714.1|	-	0.00082	19.4	0.9	0.00092	19.2	0.6	1.1	1	0	0	1	1	1	1	Ta0938
Metallothio_Pro	PF02069.11	gi|568164250|ref|YP_008947714.1|	-	0.017	14.9	4.7	0.028	14.2	3.3	1.4	1	1	0	1	1	1	0	Prokaryotic	metallothionein
SprT-like	PF10263.4	gi|568164250|ref|YP_008947714.1|	-	0.025	14.2	1.3	0.027	14.1	0.9	1.1	1	0	0	1	1	1	0	SprT-like	family
zf-FPG_IleRS	PF06827.9	gi|568164250|ref|YP_008947714.1|	-	0.033	13.8	3.0	1.8	8.3	2.1	2.2	1	1	0	1	1	1	0	Zinc	finger	found	in	FPG	and	IleRS
Zn_ribbon_2	PF12674.2	gi|568164250|ref|YP_008947714.1|	-	0.041	14.2	3.8	0.053	13.8	2.6	1.2	1	0	0	1	1	1	0	Putative	zinc	ribbon	domain
HNH_5	PF14279.1	gi|568164250|ref|YP_008947714.1|	-	0.058	13.4	4.5	0.1	12.6	3.1	1.5	1	1	0	1	1	1	0	HNH	endonuclease
DUF2175	PF09943.4	gi|568164250|ref|YP_008947714.1|	-	0.085	12.9	3.9	0.093	12.7	2.7	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2175)
zf-C3HC4_3	PF13920.1	gi|568164250|ref|YP_008947714.1|	-	0.09	12.4	4.4	0.37	10.5	2.9	1.8	1	1	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
Zn_Tnp_IS1595	PF12760.2	gi|568164250|ref|YP_008947714.1|	-	0.092	12.5	2.7	0.12	12.1	1.9	1.3	1	1	0	1	1	1	0	Transposase	zinc-ribbon	domain
PhnA_Zn_Ribbon	PF08274.7	gi|568164250|ref|YP_008947714.1|	-	0.093	12.5	8.2	2.1	8.2	5.7	2.1	1	1	0	1	1	1	0	PhnA	Zinc-Ribbon
zf-C4_ClpX	PF06689.8	gi|568164250|ref|YP_008947714.1|	-	0.1	12.1	4.3	0.16	11.4	3.0	1.4	1	1	0	1	1	1	0	ClpX	C4-type	zinc	finger
DZR	PF12773.2	gi|568164250|ref|YP_008947714.1|	-	0.14	11.9	4.2	0.25	11.1	2.9	1.5	1	1	0	1	1	1	0	Double	zinc	ribbon
Zn_ribbon_recom	PF13408.1	gi|568164250|ref|YP_008947714.1|	-	0.16	12.2	2.3	0.21	11.8	1.6	1.2	1	0	0	1	1	1	0	Recombinase	zinc	beta	ribbon	domain
zf-trcl	PF13451.1	gi|568164250|ref|YP_008947714.1|	-	0.17	11.5	6.0	4.6	6.9	1.6	2.2	2	0	0	2	2	2	0	Probable	zinc-binding	domain
OrfB_Zn_ribbon	PF07282.6	gi|568164250|ref|YP_008947714.1|	-	0.21	11.2	5.3	0.91	9.2	0.1	2.0	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
DUF164	PF02591.10	gi|568164250|ref|YP_008947714.1|	-	0.22	11.3	2.7	0.31	10.9	1.9	1.4	1	1	0	1	1	1	0	Putative	zinc	ribbon	domain
DUF3268	PF11672.3	gi|568164250|ref|YP_008947714.1|	-	0.29	11.2	2.2	0.36	10.9	1.5	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3268)
DNA_RNApol_7kD	PF03604.8	gi|568164250|ref|YP_008947714.1|	-	0.31	10.5	2.9	1.4	8.4	0.0	2.2	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Zn-ribbon_8	PF09723.5	gi|568164250|ref|YP_008947714.1|	-	0.32	10.9	7.2	2.4	8.2	0.1	2.2	1	1	0	2	2	2	0	Zinc	ribbon	domain
HypA	PF01155.14	gi|568164250|ref|YP_008947714.1|	-	0.34	10.6	5.0	2.5	7.7	3.3	1.9	1	1	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
Evr1_Alr	PF04777.8	gi|568164250|ref|YP_008947714.1|	-	0.35	10.7	5.8	1.4	8.8	4.0	1.8	1	1	0	1	1	1	0	Erv1	/	Alr	family
DUF678	PF05077.7	gi|568164250|ref|YP_008947714.1|	-	0.35	10.8	2.0	0.49	10.4	0.1	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF678)
ADK_lid	PF05191.9	gi|568164250|ref|YP_008947714.1|	-	0.38	10.4	2.8	0.64	9.7	0.0	2.1	2	1	0	2	2	2	0	Adenylate	kinase,	active	site	lid
zf-H2C2_2	PF13465.1	gi|568164250|ref|YP_008947714.1|	-	0.47	10.8	6.3	4.6	7.7	1.7	2.2	2	0	0	2	2	2	0	Zinc-finger	double	domain
LIM	PF00412.17	gi|568164250|ref|YP_008947714.1|	-	0.53	10.3	8.3	21	5.2	5.6	2.0	1	1	0	1	1	1	0	LIM	domain
RPAP2_Rtr1	PF04181.8	gi|568164250|ref|YP_008947714.1|	-	0.93	9.6	5.7	1.3	9.1	4.0	1.4	1	1	0	1	1	1	0	Rtr1/RPAP2	family
CpXC	PF14353.1	gi|568164250|ref|YP_008947714.1|	-	0.97	9.4	6.1	25	4.8	0.2	2.0	1	1	1	2	2	2	0	CpXC	protein
Prok-RING_1	PF14446.1	gi|568164250|ref|YP_008947714.1|	-	0.99	9.1	5.7	17	5.2	4.0	2.0	1	1	0	1	1	1	0	Prokaryotic	RING	finger	family	1
Sgf11	PF08209.6	gi|568164250|ref|YP_008947714.1|	-	2.2	7.6	7.0	4.7	6.6	0.2	2.2	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
NinF	PF05810.7	gi|568164250|ref|YP_008947714.1|	-	2.7	7.8	6.8	74	3.2	4.7	2.1	1	1	0	1	1	1	0	NinF	protein
DUF2116	PF09889.4	gi|568164250|ref|YP_008947714.1|	-	6.7	6.5	7.8	49	3.8	5.1	2.0	1	1	1	2	2	2	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
HTH_5	PF01022.15	gi|568164251|ref|YP_008947715.1|	-	1.4e-16	59.8	0.6	2.3e-16	59.1	0.4	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|568164251|ref|YP_008947715.1|	-	2.4e-10	40.0	0.0	3.7e-10	39.4	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|568164251|ref|YP_008947715.1|	-	1.6e-07	30.8	0.0	2.9e-07	30.1	0.0	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_34	PF13601.1	gi|568164251|ref|YP_008947715.1|	-	1e-05	25.4	0.0	1.7e-05	24.7	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_24	PF13412.1	gi|568164251|ref|YP_008947715.1|	-	0.0002	20.7	0.1	0.00034	19.9	0.1	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TFIIE_alpha	PF02002.12	gi|568164251|ref|YP_008947715.1|	-	0.00072	19.0	0.4	0.0018	17.7	0.3	1.6	1	1	0	1	1	1	1	TFIIE	alpha	subunit
Rrf2	PF02082.15	gi|568164251|ref|YP_008947715.1|	-	0.0018	18.3	0.0	0.0024	17.9	0.0	1.2	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_38	PF13936.1	gi|568164251|ref|YP_008947715.1|	-	0.002	17.6	0.0	0.0043	16.5	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|568164251|ref|YP_008947715.1|	-	0.0024	17.4	0.0	0.0042	16.7	0.0	1.5	1	0	0	1	1	1	1	HTH	domain
HTH_9	PF08221.6	gi|568164251|ref|YP_008947715.1|	-	0.0028	17.4	0.5	0.005	16.6	0.4	1.4	1	0	0	1	1	1	1	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
MarR_2	PF12802.2	gi|568164251|ref|YP_008947715.1|	-	0.0047	16.5	0.0	0.0068	16.0	0.0	1.3	1	0	0	1	1	1	1	MarR	family
Phage_rep_org_N	PF09681.5	gi|568164251|ref|YP_008947715.1|	-	0.0051	16.3	0.0	0.0066	16.0	0.0	1.2	1	0	0	1	1	1	1	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
HTH_40	PF14493.1	gi|568164251|ref|YP_008947715.1|	-	0.0079	16.3	0.2	0.029	14.5	0.2	1.8	1	1	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|568164251|ref|YP_008947715.1|	-	0.02	14.5	0.0	0.034	13.8	0.0	1.4	1	0	0	1	1	1	0	Homeodomain-like	domain
Sigma70_r4	PF04545.11	gi|568164251|ref|YP_008947715.1|	-	0.026	13.8	0.0	0.26	10.6	0.0	2.1	2	0	0	2	2	2	0	Sigma-70,	region	4
HTH_Tnp_Tc3_1	PF11427.3	gi|568164251|ref|YP_008947715.1|	-	0.038	13.6	0.2	0.076	12.6	0.2	1.6	1	0	0	1	1	1	0	Tc3	transposase
KorB	PF08535.5	gi|568164251|ref|YP_008947715.1|	-	0.045	13.9	0.0	0.12	12.5	0.0	1.6	1	1	0	1	1	1	0	KorB	domain
DUF2551	PF10826.3	gi|568164251|ref|YP_008947715.1|	-	0.056	13.3	0.2	0.14	12.0	0.1	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2551)
Arg_repressor	PF01316.16	gi|568164251|ref|YP_008947715.1|	-	0.084	12.4	0.1	0.32	10.5	0.0	1.8	1	1	1	2	2	2	0	Arginine	repressor,	DNA	binding	domain
LexA_DNA_bind	PF01726.11	gi|568164251|ref|YP_008947715.1|	-	0.088	12.3	0.0	0.16	11.5	0.0	1.4	1	0	0	1	1	1	0	LexA	DNA	binding	domain
Penicillinase_R	PF03965.11	gi|568164251|ref|YP_008947715.1|	-	0.088	12.8	0.0	0.14	12.2	0.0	1.4	1	1	0	1	1	1	0	Penicillinase	repressor
Phage_RpbA	PF10789.4	gi|568164251|ref|YP_008947715.1|	-	0.1	12.4	0.0	0.14	11.9	0.0	1.3	1	0	0	1	1	1	0	Phage	RNA	polymerase	binding,	RpbA
Nudc_N	PF14050.1	gi|568164901|ref|YP_008947716.1|	-	0.088	12.7	0.2	0.11	12.4	0.1	1.3	1	0	0	1	1	1	0	N-terminal	conserved	domain	of	Nudc.
Ribosomal_L19	PF01245.15	gi|568164252|ref|YP_008947717.1|	-	0.066	13.0	0.1	0.14	11.9	0.0	1.5	2	0	0	2	2	2	0	Ribosomal	protein	L19
Acyl-CoA_dh_1	PF00441.19	gi|568164253|ref|YP_008947719.1|	-	3.1e-31	108.4	0.0	4.7e-31	107.9	0.0	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|568164253|ref|YP_008947719.1|	-	6.2e-16	57.6	0.0	1.4e-15	56.5	0.0	1.6	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.6	gi|568164253|ref|YP_008947719.1|	-	1.6e-10	41.3	0.0	3.3e-10	40.3	0.0	1.5	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.11	gi|568164253|ref|YP_008947719.1|	-	2.5e-08	34.4	0.0	4.5e-08	33.6	0.0	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Thermopsin	PF05317.6	gi|568164254|ref|YP_008947720.1|	-	1.5e-89	299.4	26.3	1.9e-89	299.1	18.2	1.1	1	0	0	1	1	1	1	Thermopsin
ILVD_EDD	PF00920.16	gi|568164255|ref|YP_008947721.1|	-	1.3e-212	706.8	2.1	1.5e-212	706.7	1.5	1.0	1	0	0	1	1	1	1	Dehydratase	family
GRIM-19	PF06212.7	gi|568164256|ref|YP_008947722.1|	-	0.024	14.3	0.1	0.024	14.3	0.1	1.2	1	0	0	1	1	1	0	GRIM-19	protein
DUF220	PF02713.9	gi|568164256|ref|YP_008947722.1|	-	0.072	12.7	0.3	0.11	12.2	0.2	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	DUF220
TAFII28	PF04719.9	gi|568164256|ref|YP_008947722.1|	-	0.073	12.8	0.1	0.087	12.6	0.1	1.2	1	0	0	1	1	1	0	hTAFII28-like	protein	conserved	region
KIAA1430	PF13879.1	gi|568164256|ref|YP_008947722.1|	-	0.11	12.9	1.3	0.14	12.6	0.9	1.2	1	0	0	1	1	1	0	KIAA1430	homologue
Arena_nucleocap	PF00843.12	gi|568164256|ref|YP_008947722.1|	-	0.16	9.8	0.4	0.15	9.9	0.3	1.0	1	0	0	1	1	1	0	Arenavirus	nucleocapsid	protein
YbjM	PF11045.3	gi|568164903|ref|YP_008947723.1|	-	0.053	13.2	0.0	0.053	13.2	0.0	1.1	1	0	0	1	1	1	0	Putative	inner	membrane	protein	of	Enterobacteriaceae
RseC_MucC	PF04246.7	gi|568164903|ref|YP_008947723.1|	-	0.11	12.0	0.1	0.11	12.0	0.0	1.0	1	0	0	1	1	1	0	Positive	regulator	of	sigma(E),	RseC/MucC
DUF2613	PF11021.3	gi|568164903|ref|YP_008947723.1|	-	0.89	9.3	3.6	1	9.1	2.2	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2613)
PsbH	PF00737.15	gi|568164903|ref|YP_008947723.1|	-	0.93	9.1	3.1	1.6	8.4	2.1	1.6	1	1	0	1	1	1	0	Photosystem	II	10	kDa	phosphoprotein
DLH	PF01738.13	gi|568164257|ref|YP_008947725.1|	-	1.1e-68	230.7	0.0	2.1e-68	229.8	0.0	1.4	1	1	0	1	1	1	1	Dienelactone	hydrolase	family
Abhydrolase_5	PF12695.2	gi|568164257|ref|YP_008947725.1|	-	2.7e-11	43.4	0.0	4e-11	42.8	0.0	1.3	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_6	PF12697.2	gi|568164257|ref|YP_008947725.1|	-	6.9e-06	26.1	0.0	0.04	13.7	0.0	2.2	1	1	1	2	2	2	2	Alpha/beta	hydrolase	family
Abhydrolase_2	PF02230.11	gi|568164257|ref|YP_008947725.1|	-	0.00044	19.7	0.0	0.00068	19.1	0.0	1.2	1	0	0	1	1	1	1	Phospholipase/Carboxylesterase
Peptidase_S9	PF00326.16	gi|568164257|ref|YP_008947725.1|	-	0.025	13.7	0.0	0.55	9.4	0.0	2.1	2	0	0	2	2	2	0	Prolyl	oligopeptidase	family
Abhydrolase_3	PF07859.8	gi|568164257|ref|YP_008947725.1|	-	0.029	13.9	0.0	1.2	8.6	0.0	2.3	1	1	1	2	2	2	0	alpha/beta	hydrolase	fold
DUF3791	PF12668.2	gi|568164257|ref|YP_008947725.1|	-	0.044	13.3	0.0	0.081	12.5	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3791)
Chlorophyllase2	PF12740.2	gi|568164257|ref|YP_008947725.1|	-	0.086	11.7	0.0	0.14	10.9	0.0	1.5	1	1	0	1	1	1	0	Chlorophyllase	enzyme
Chlorophyllase	PF07224.6	gi|568164257|ref|YP_008947725.1|	-	0.092	11.5	0.0	0.26	10.0	0.0	1.6	2	0	0	2	2	2	0	Chlorophyllase
BAAT_C	PF08840.6	gi|568164257|ref|YP_008947725.1|	-	0.15	11.7	0.0	12	5.4	0.0	2.4	2	0	0	2	2	2	0	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
DUF1154	PF06631.6	gi|568164258|ref|YP_008947726.1|	-	0.015	14.9	0.1	0.015	14.9	0.1	1.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1154)
SelB-wing_3	PF09107.6	gi|568164258|ref|YP_008947726.1|	-	0.074	12.4	0.0	0.092	12.1	0.0	1.1	1	0	0	1	1	1	0	Elongation	factor	SelB,	winged	helix
DUF72	PF01904.13	gi|568164259|ref|YP_008947727.1|	-	8.5e-44	150.0	0.1	9.6e-44	149.8	0.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF72
RVT_3	PF13456.1	gi|568164260|ref|YP_008947728.1|	-	4.7e-17	61.5	0.0	5.9e-17	61.2	0.0	1.1	1	0	0	1	1	1	1	Reverse	transcriptase-like
RNase_H	PF00075.19	gi|568164260|ref|YP_008947728.1|	-	2.6e-07	31.0	0.0	3.2e-07	30.7	0.0	1.1	1	0	0	1	1	1	1	RNase	H
DUF1465	PF07323.7	gi|568164260|ref|YP_008947728.1|	-	0.037	13.5	0.0	0.053	13.0	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1465)
Flavin_Reduct	PF01613.13	gi|568164261|ref|YP_008947729.1|	-	8.8e-20	71.1	0.0	1e-19	70.8	0.0	1.0	1	0	0	1	1	1	1	Flavin	reductase	like	domain
Na_Ca_ex	PF01699.19	gi|568164262|ref|YP_008947730.1|	-	1.2e-27	96.1	31.2	2.2e-15	56.4	6.0	2.2	2	0	0	2	2	2	2	Sodium/calcium	exchanger	protein
FA_desaturase	PF00487.19	gi|568164262|ref|YP_008947730.1|	-	7.4	5.9	7.2	7.9	5.8	2.8	2.3	1	1	1	2	2	2	0	Fatty	acid	desaturase
Peptidase_M61	PF05299.7	gi|568164263|ref|YP_008947731.1|	-	2.7e-30	104.8	0.0	4.6e-30	104.1	0.0	1.4	1	0	0	1	1	1	1	M61	glycyl	aminopeptidase
Peptidase_MA_2	PF13485.1	gi|568164263|ref|YP_008947731.1|	-	8.9e-09	35.4	0.0	1.4e-08	34.7	0.0	1.4	1	0	0	1	1	1	1	Peptidase	MA	superfamily
PDZ_2	PF13180.1	gi|568164263|ref|YP_008947731.1|	-	0.0031	17.3	0.3	0.048	13.5	0.2	2.5	1	1	0	1	1	1	1	PDZ	domain
GRASP55_65	PF04495.9	gi|568164263|ref|YP_008947731.1|	-	0.041	13.8	0.0	0.082	12.8	0.0	1.6	1	0	0	1	1	1	0	GRASP55/65	PDZ-like	domain
PDZ	PF00595.19	gi|568164263|ref|YP_008947731.1|	-	0.11	12.6	0.0	0.27	11.4	0.0	1.6	1	0	0	1	1	1	0	PDZ	domain	(Also	known	as	DHR	or	GLGF)
Sugar_tr	PF00083.19	gi|568164264|ref|YP_008947732.1|	-	5.6e-41	140.5	27.8	6.8e-41	140.2	19.3	1.0	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|568164264|ref|YP_008947732.1|	-	1.3e-33	116.1	51.0	4.7e-27	94.6	24.8	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
DUF1228	PF06779.9	gi|568164264|ref|YP_008947732.1|	-	0.0058	16.6	0.4	0.0058	16.6	0.2	3.4	3	1	0	3	3	3	1	Protein	of	unknown	function	(DUF1228)
PPR_1	PF12854.2	gi|568164264|ref|YP_008947732.1|	-	0.093	12.2	0.1	0.21	11.1	0.1	1.6	1	0	0	1	1	1	0	PPR	repeat
PPR	PF01535.15	gi|568164264|ref|YP_008947732.1|	-	0.095	12.7	0.1	0.25	11.3	0.0	1.7	1	0	0	1	1	1	0	PPR	repeat
DUF4131	PF13567.1	gi|568164264|ref|YP_008947732.1|	-	0.11	11.8	0.1	0.11	11.8	0.1	4.3	3	1	2	5	5	5	0	Domain	of	unknown	function	(DUF4131)
CoA_transf_3	PF02515.12	gi|568164265|ref|YP_008947734.1|	-	6e-32	110.4	0.0	1.1e-31	109.5	0.0	1.5	1	1	0	1	1	1	1	CoA-transferase	family	III
DUF1028	PF06267.7	gi|568164266|ref|YP_008947735.1|	-	1.1e-67	227.1	0.0	1.5e-67	226.7	0.0	1.2	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF1028)
PG_binding_2	PF08823.6	gi|568164266|ref|YP_008947735.1|	-	1.3e-13	50.7	0.1	3e-13	49.6	0.1	1.6	1	0	0	1	1	1	1	Putative	peptidoglycan	binding	domain
Thiolase_C	PF02803.13	gi|568164267|ref|YP_008947736.1|	-	2.4e-06	26.9	0.1	5e-06	25.9	0.1	1.5	1	0	0	1	1	1	1	Thiolase,	C-terminal	domain
ACP_syn_III	PF08545.5	gi|568164267|ref|YP_008947736.1|	-	6.2e-05	22.5	0.0	0.0015	18.1	0.1	2.4	2	0	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Thiolase_N	PF00108.18	gi|568164267|ref|YP_008947736.1|	-	0.00046	19.2	0.5	0.0023	16.9	0.0	2.2	3	0	0	3	3	3	1	Thiolase,	N-terminal	domain
HypA	PF01155.14	gi|568164268|ref|YP_008947737.1|	-	0.00023	20.7	0.3	0.00034	20.2	0.2	1.2	1	0	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
Zn_Tnp_IS1595	PF12760.2	gi|568164268|ref|YP_008947737.1|	-	0.0019	17.9	1.4	0.14	11.9	0.0	2.4	2	0	0	2	2	2	1	Transposase	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|568164268|ref|YP_008947737.1|	-	0.0022	17.1	2.1	0.0022	17.1	1.4	1.7	2	0	0	2	2	1	1	zinc-ribbon	domain
FdhE	PF04216.7	gi|568164268|ref|YP_008947737.1|	-	0.0037	17.0	0.6	0.0046	16.7	0.4	1.1	1	0	0	1	1	1	1	Protein	involved	in	formate	dehydrogenase	formation
zinc_ribbon_4	PF13717.1	gi|568164268|ref|YP_008947737.1|	-	0.0044	16.6	3.9	0.3	10.8	2.7	2.5	1	1	0	1	1	1	1	zinc-ribbon	domain
TFIIS_C	PF01096.13	gi|568164268|ref|YP_008947737.1|	-	0.005	16.4	2.6	1.9	8.2	0.1	2.6	2	0	0	2	2	2	2	Transcription	factor	S-II	(TFIIS)
zinc_ribbon_5	PF13719.1	gi|568164268|ref|YP_008947737.1|	-	0.0062	16.0	4.2	0.39	10.3	2.9	2.4	1	1	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|568164268|ref|YP_008947737.1|	-	0.0089	15.8	1.7	0.0089	15.8	1.1	1.8	2	0	0	2	2	2	1	Double	zinc	ribbon
NRDD	PF13597.1	gi|568164268|ref|YP_008947737.1|	-	0.0095	14.0	0.8	0.011	13.8	0.6	1.0	1	0	0	1	1	1	1	Anaerobic	ribonucleoside-triphosphate	reductase
DUF2082	PF09855.4	gi|568164268|ref|YP_008947737.1|	-	0.0098	15.7	3.3	0.43	10.4	0.1	2.3	2	0	0	2	2	2	1	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
Ribosomal_L37e	PF01907.14	gi|568164268|ref|YP_008947737.1|	-	0.014	15.1	2.8	0.025	14.3	2.0	1.4	1	0	0	1	1	1	0	Ribosomal	protein	L37e
DUF2072	PF09845.4	gi|568164268|ref|YP_008947737.1|	-	0.019	14.9	0.5	0.026	14.4	0.3	1.3	1	0	0	1	1	1	0	Zn-ribbon	containing	protein	(DUF2072)
DUF35_N	PF12172.3	gi|568164268|ref|YP_008947737.1|	-	0.023	14.6	1.0	0.046	13.6	0.7	1.5	1	0	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-ISL3	PF14690.1	gi|568164268|ref|YP_008947737.1|	-	0.029	14.3	0.5	0.59	10.2	0.0	2.4	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
TF_Zn_Ribbon	PF08271.7	gi|568164268|ref|YP_008947737.1|	-	0.033	13.5	1.4	2.7	7.3	0.1	2.5	2	0	0	2	2	2	0	TFIIB	zinc-binding
UPF0547	PF10571.4	gi|568164268|ref|YP_008947737.1|	-	0.045	13.4	3.1	1.4	8.6	0.1	2.5	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zinc_ribbon_2	PF13240.1	gi|568164268|ref|YP_008947737.1|	-	0.06	12.8	5.8	0.3	10.6	4.0	2.2	1	1	0	1	1	1	0	zinc-ribbon	domain
zf-C3HC4_3	PF13920.1	gi|568164268|ref|YP_008947737.1|	-	0.069	12.8	3.0	0.088	12.4	0.7	2.0	2	0	0	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
zf-H2C2_2	PF13465.1	gi|568164268|ref|YP_008947737.1|	-	0.099	12.9	2.4	2	8.8	0.1	2.4	2	0	0	2	2	2	0	Zinc-finger	double	domain
DNA_RNApol_7kD	PF03604.8	gi|568164268|ref|YP_008947737.1|	-	0.15	11.5	4.5	0.5	9.8	3.1	1.9	1	0	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zinc-ribbons_6	PF07191.7	gi|568164268|ref|YP_008947737.1|	-	0.18	11.5	1.1	0.52	10.1	0.4	1.9	2	0	0	2	2	2	0	zinc-ribbons
zf-C2H2	PF00096.21	gi|568164268|ref|YP_008947737.1|	-	0.2	12.0	6.1	0.98	9.8	0.8	2.6	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
FYVE	PF01363.16	gi|568164268|ref|YP_008947737.1|	-	0.24	11.3	3.5	0.3	10.9	2.4	1.4	1	1	0	1	1	1	0	FYVE	zinc	finger
zf-C2H2_4	PF13894.1	gi|568164268|ref|YP_008947737.1|	-	0.24	11.8	1.6	16	6.0	0.2	2.4	2	0	0	2	2	2	0	C2H2-type	zinc	finger
Zn-ribbon_8	PF09723.5	gi|568164268|ref|YP_008947737.1|	-	0.4	10.6	6.9	8.4	6.4	4.8	2.3	1	1	0	1	1	1	0	Zinc	ribbon	domain
A2L_zn_ribbon	PF08792.5	gi|568164268|ref|YP_008947737.1|	-	0.51	9.8	7.6	0.9	9.0	0.3	2.7	3	0	0	3	3	3	0	A2L	zinc	ribbon	domain
Zn_ribbon_recom	PF13408.1	gi|568164268|ref|YP_008947737.1|	-	0.66	10.2	4.5	22	5.4	3.1	2.4	1	1	0	1	1	1	0	Recombinase	zinc	beta	ribbon	domain
zf-HIT	PF04438.11	gi|568164268|ref|YP_008947737.1|	-	2.3	7.9	7.1	7.8	6.2	0.7	2.5	2	0	0	2	2	2	0	HIT	zinc	finger
DUF3797	PF12677.2	gi|568164268|ref|YP_008947737.1|	-	4	7.1	5.3	1.2	8.8	0.2	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3797)
zf-C2H2_6	PF13912.1	gi|568164268|ref|YP_008947737.1|	-	5.7	6.9	7.5	0.83	9.6	0.4	2.6	3	0	0	3	3	2	0	C2H2-type	zinc	finger
Rubredoxin	PF00301.15	gi|568164268|ref|YP_008947737.1|	-	6.8	6.6	6.8	7.3	6.5	0.3	2.4	1	1	1	2	2	2	0	Rubredoxin
DUF4352	PF11611.3	gi|568164906|ref|YP_008947738.1|	-	2.8e-05	24.2	2.9	2.8e-05	24.2	2.0	2.1	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4352)
DUF4083	PF13314.1	gi|568164906|ref|YP_008947738.1|	-	0.026	14.3	1.1	0.066	13.0	0.7	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4083)
Sugar_tr	PF00083.19	gi|568164907|ref|YP_008947739.1|	-	2e-21	76.1	49.6	8.1e-19	67.5	34.4	2.1	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|568164907|ref|YP_008947739.1|	-	3.7e-16	58.8	57.6	3.7e-16	58.8	39.9	1.7	1	1	0	1	1	1	1	Major	Facilitator	Superfamily
NAD_binding_8	PF13450.1	gi|568164269|ref|YP_008947740.1|	-	2.3e-13	49.9	0.0	5.3e-13	48.7	0.0	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Amino_oxidase	PF01593.19	gi|568164269|ref|YP_008947740.1|	-	2e-12	46.9	0.0	5.4e-12	45.5	0.0	1.7	2	0	0	2	2	2	1	Flavin	containing	amine	oxidoreductase
DAO	PF01266.19	gi|568164269|ref|YP_008947740.1|	-	2.4e-12	46.4	0.0	2.2e-09	36.7	0.0	2.1	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|568164269|ref|YP_008947740.1|	-	3.1e-07	29.6	0.1	1.7e-06	27.1	0.1	2.1	3	0	0	3	3	3	1	FAD	binding	domain
Thi4	PF01946.12	gi|568164269|ref|YP_008947740.1|	-	2.6e-06	26.6	0.2	3.9e-06	26.1	0.1	1.2	1	0	0	1	1	1	1	Thi4	family
FAD_binding_3	PF01494.14	gi|568164269|ref|YP_008947740.1|	-	1.1e-05	24.6	0.3	1.7e-05	24.1	0.2	1.2	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox_2	PF07992.9	gi|568164269|ref|YP_008947740.1|	-	1.8e-05	24.7	0.0	5.6e-05	23.1	0.0	1.8	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|568164269|ref|YP_008947740.1|	-	0.00011	22.3	0.0	0.00033	20.7	0.0	1.9	2	0	0	2	2	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|568164269|ref|YP_008947740.1|	-	0.00011	20.8	0.0	0.015	13.8	0.2	2.1	2	0	0	2	2	2	2	HI0933-like	protein
FAD_oxidored	PF12831.2	gi|568164269|ref|YP_008947740.1|	-	0.0017	17.5	0.0	0.0025	16.9	0.0	1.2	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Pyr_redox	PF00070.22	gi|568164269|ref|YP_008947740.1|	-	0.0039	17.5	1.2	0.04	14.3	0.3	2.3	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.7	gi|568164269|ref|YP_008947740.1|	-	0.0082	15.1	0.0	0.013	14.4	0.0	1.2	1	0	0	1	1	1	1	Lycopene	cyclase	protein
Strep_67kDa_ant	PF06100.6	gi|568164269|ref|YP_008947740.1|	-	0.022	13.1	0.1	0.09	11.1	0.1	1.9	2	0	0	2	2	2	0	Streptococcal	67	kDa	myosin-cross-reactive	antigen	like	family
GIDA	PF01134.17	gi|568164269|ref|YP_008947740.1|	-	0.039	12.8	0.6	0.057	12.2	0.4	1.2	1	0	0	1	1	1	0	Glucose	inhibited	division	protein	A
UDPG_MGDP_dh_N	PF03721.9	gi|568164269|ref|YP_008947740.1|	-	0.046	13.1	0.3	0.078	12.3	0.2	1.3	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
NAD_binding_9	PF13454.1	gi|568164269|ref|YP_008947740.1|	-	0.056	13.2	0.0	0.11	12.3	0.0	1.4	1	0	0	1	1	1	0	FAD-NAD(P)-binding
FA_hydroxylase	PF04116.8	gi|568164270|ref|YP_008947741.1|	-	1e-08	35.5	19.9	1.3e-08	35.2	13.8	1.1	1	0	0	1	1	1	1	Fatty	acid	hydroxylase	superfamily
SQS_PSY	PF00494.14	gi|568164271|ref|YP_008947742.1|	-	8.4e-49	166.2	0.0	9.7e-49	166.0	0.0	1.0	1	0	0	1	1	1	1	Squalene/phytoene	synthase
Glycos_transf_2	PF00535.21	gi|568164273|ref|YP_008947744.1|	-	0.0011	18.7	0.0	0.0021	17.7	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
NTP_transferase	PF00483.18	gi|568164273|ref|YP_008947744.1|	-	0.054	12.7	0.0	0.089	12.0	0.0	1.3	1	0	0	1	1	1	0	Nucleotidyl	transferase
HCV_NS4a	PF01006.15	gi|568164274|ref|YP_008947745.1|	-	0.026	14.0	3.3	0.96	9.0	0.2	3.2	3	0	0	3	3	3	0	Hepatitis	C	virus	non-structural	protein	NS4a
DUF4064	PF13273.1	gi|568164274|ref|YP_008947745.1|	-	1.3	9.1	8.8	1.5	8.9	3.4	2.9	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF4064)
Rifin_STEVOR	PF02009.11	gi|568164274|ref|YP_008947745.1|	-	5.2	6.6	6.4	0.39	10.3	0.8	1.8	2	0	0	2	2	2	0	Rifin/stevor	family
Aldedh	PF00171.17	gi|568164275|ref|YP_008947746.1|	-	6.4e-146	486.3	0.0	7.2e-146	486.1	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
LuxC	PF05893.9	gi|568164275|ref|YP_008947746.1|	-	0.023	13.4	0.1	0.052	12.2	0.0	1.5	2	0	0	2	2	2	0	Acyl-CoA	reductase	(LuxC)
Amidohydro_2	PF04909.9	gi|568164276|ref|YP_008947747.1|	-	3.5e-51	174.3	0.2	3.9e-51	174.1	0.2	1.0	1	0	0	1	1	1	1	Amidohydrolase
SprT-like	PF10263.4	gi|568164277|ref|YP_008947748.1|	-	0.043	13.4	0.0	0.047	13.3	0.0	1.1	1	0	0	1	1	1	0	SprT-like	family
Hjc	PF01870.13	gi|568164278|ref|YP_008947749.1|	-	4.8e-26	90.1	0.1	6.1e-26	89.8	0.1	1.1	1	0	0	1	1	1	1	Archaeal	holliday	junction	resolvase	(hjc)
Endonuc-MspI	PF09208.5	gi|568164278|ref|YP_008947749.1|	-	0.01	14.8	0.5	0.018	14.1	0.3	1.3	2	0	0	2	2	2	0	Restriction	endonuclease	MspI
Ald_Xan_dh_C2	PF02738.13	gi|568164279|ref|YP_008947750.1|	-	5.8e-115	384.6	0.0	7.9e-115	384.2	0.0	1.1	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|568164279|ref|YP_008947750.1|	-	1.1e-21	77.0	0.0	2.3e-21	75.9	0.0	1.6	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
Dockerin_1	PF00404.13	gi|568164279|ref|YP_008947750.1|	-	0.1	12.3	1.9	0.24	11.1	0.1	2.5	2	0	0	2	2	2	0	Dockerin	type	I	repeat
TPP_enzyme_N	PF02776.13	gi|568164280|ref|YP_008947751.1|	-	2.1e-31	108.7	0.0	3.4e-31	108.0	0.0	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|568164280|ref|YP_008947751.1|	-	2.7e-14	53.0	0.0	5.2e-14	52.0	0.0	1.5	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.17	gi|568164280|ref|YP_008947751.1|	-	3.4e-12	46.2	0.0	8.1e-12	45.0	0.0	1.6	1	1	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
DUF3311	PF11755.3	gi|568164281|ref|YP_008947752.1|	-	6.1e-14	51.3	11.2	6.5e-14	51.2	7.8	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3311)
V1R	PF03402.9	gi|568164281|ref|YP_008947752.1|	-	0.16	11.3	2.7	0.16	11.3	1.9	1.0	1	0	0	1	1	1	0	Vomeronasal	organ	pheromone	receptor	family,	V1R
DctQ	PF04290.7	gi|568164281|ref|YP_008947752.1|	-	0.17	11.6	7.2	0.22	11.2	5.0	1.1	1	0	0	1	1	1	0	Tripartite	ATP-independent	periplasmic	transporters,	DctQ	component
DUF3917	PF13055.1	gi|568164281|ref|YP_008947752.1|	-	0.31	11.3	3.2	0.39	10.9	2.2	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3917)
DUF485	PF04341.7	gi|568164281|ref|YP_008947752.1|	-	0.32	10.7	9.5	0.38	10.4	6.6	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF485
DUF3951	PF13131.1	gi|568164281|ref|YP_008947752.1|	-	1.4	8.7	13.4	0.5	10.1	4.3	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3951)
DUF4212	PF13937.1	gi|568164281|ref|YP_008947752.1|	-	3	7.8	6.8	4.1	7.4	4.7	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4212)
SSF	PF00474.12	gi|568164282|ref|YP_008947753.1|	-	1.1e-16	60.5	34.4	1.1e-16	60.5	23.9	1.8	2	0	0	2	2	2	1	Sodium:solute	symporter	family
Adeno_E3_14_5	PF04834.7	gi|568164282|ref|YP_008947753.1|	-	1.9	8.9	4.5	0.64	10.4	0.1	2.6	3	0	0	3	3	3	0	Early	E3	14.5	kDa	protein
SoxE	PF06525.6	gi|568164284|ref|YP_008947755.1|	-	8.7e-90	299.2	17.1	8.7e-90	299.2	11.9	2.0	2	0	0	2	2	2	1	Sulfocyanin	(SoxE)
DUF2861	PF11060.3	gi|568164284|ref|YP_008947755.1|	-	0.033	13.5	0.1	4.1	6.6	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2861)
NPCBM_assoc	PF10633.4	gi|568164284|ref|YP_008947755.1|	-	0.23	11.5	2.6	2.6	8.1	0.0	2.8	3	0	0	3	3	3	0	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
BofA	PF07441.6	gi|568164285|ref|YP_008947756.1|	-	1.5	8.8	14.0	0.11	12.5	1.3	2.7	1	1	1	2	2	2	0	SigmaK-factor	processing	regulatory	protein	BofA
Band_7	PF01145.20	gi|568164286|ref|YP_008947757.1|	-	4.7e-20	72.2	1.2	7.9e-20	71.5	0.9	1.4	1	0	0	1	1	1	1	SPFH	domain	/	Band	7	family
Band_7_1	PF13421.1	gi|568164286|ref|YP_008947757.1|	-	4.7e-14	52.4	0.1	1.1e-13	51.1	0.1	1.6	1	1	0	1	1	1	1	SPFH	domain-Band	7	family
Citrate_synt	PF00285.16	gi|568164287|ref|YP_008947758.1|	-	0.029	13.1	0.2	1	7.9	0.0	2.0	1	1	1	2	2	2	0	Citrate	synthase
DUF3829	PF12889.2	gi|568164287|ref|YP_008947758.1|	-	0.081	12.1	0.0	0.1	11.7	0.0	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3829)
CAMP_factor	PF07373.6	gi|568164287|ref|YP_008947758.1|	-	0.091	12.2	0.4	0.11	11.9	0.3	1.3	1	0	0	1	1	1	0	CAMP	factor	(Cfa)
DUF1741	PF08427.5	gi|568164287|ref|YP_008947758.1|	-	0.11	11.9	0.8	0.14	11.6	0.6	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1741)
DUF2281	PF10047.4	gi|568164908|ref|YP_008947759.1|	-	0.00084	19.5	0.6	0.011	16.0	0.2	2.1	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2281)
MgtE_N	PF03448.12	gi|568164908|ref|YP_008947759.1|	-	0.025	14.9	1.1	0.047	14.0	0.8	1.4	1	1	0	1	1	1	0	MgtE	intracellular	N	domain
DUF2314	PF10077.4	gi|568164908|ref|YP_008947759.1|	-	0.028	14.4	0.0	0.03	14.3	0.0	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2314)
PRANC	PF09372.5	gi|568164908|ref|YP_008947759.1|	-	0.093	12.7	1.1	0.16	11.9	0.3	1.8	1	1	1	2	2	2	0	PRANC	domain
HTH_26	PF13443.1	gi|568164908|ref|YP_008947759.1|	-	0.1	12.8	0.1	0.14	12.3	0.0	1.2	1	0	0	1	1	1	0	Cro/C1-type	HTH	DNA-binding	domain
Hemerythrin	PF01814.18	gi|568164288|ref|YP_008947760.1|	-	0.12	12.5	0.1	0.37	10.9	0.0	1.8	1	1	0	1	1	1	0	Hemerythrin	HHE	cation	binding	domain
TCTP	PF00838.12	gi|568164288|ref|YP_008947760.1|	-	0.2	11.6	1.6	0.31	11.0	0.2	1.8	1	1	1	2	2	2	0	Translationally	controlled	tumour	protein
Gemini_mov	PF01708.11	gi|568164289|ref|YP_008947761.1|	-	0.0031	17.0	1.1	0.0048	16.4	0.8	1.2	1	0	0	1	1	1	1	Geminivirus	putative	movement	protein
LAB_N	PF07578.6	gi|568164289|ref|YP_008947761.1|	-	0.075	12.9	1.8	0.14	12.0	1.1	1.6	1	1	0	1	1	1	0	Lipid	A	Biosynthesis	N-terminal	domain
Cellulose_synt	PF03552.9	gi|568164289|ref|YP_008947761.1|	-	0.13	10.5	3.8	0.15	10.3	2.7	1.0	1	0	0	1	1	1	0	Cellulose	synthase
SLAC1	PF03595.12	gi|568164909|ref|YP_008947763.1|	-	1.3e-45	155.5	36.2	1.6e-45	155.1	25.1	1.1	1	0	0	1	1	1	1	Voltage-dependent	anion	channel
COX2_TM	PF02790.10	gi|568164909|ref|YP_008947763.1|	-	0.019	14.9	0.4	0.019	14.9	0.3	3.1	2	1	1	3	3	3	0	Cytochrome	C	oxidase	subunit	II,	transmembrane	domain
UDG	PF03167.14	gi|568164291|ref|YP_008947764.1|	-	1e-30	106.1	0.0	1.3e-30	105.9	0.0	1.1	1	0	0	1	1	1	1	Uracil	DNA	glycosylase	superfamily
Planc_extracel	PF07595.7	gi|568164291|ref|YP_008947764.1|	-	0.082	12.6	0.4	0.17	11.6	0.3	1.5	1	0	0	1	1	1	0	Planctomycete	extracellular
TraB	PF01963.12	gi|568164291|ref|YP_008947764.1|	-	0.11	11.9	0.0	0.21	10.9	0.0	1.5	2	0	0	2	2	2	0	TraB	family
Peptidase_M20	PF01546.23	gi|568164292|ref|YP_008947765.1|	-	1.9e-28	99.2	0.0	2.5e-28	98.9	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|568164292|ref|YP_008947765.1|	-	2.2e-19	69.2	0.0	4.2e-19	68.3	0.0	1.5	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Coagulase	PF08764.5	gi|568164292|ref|YP_008947765.1|	-	0.0034	17.3	0.4	0.0064	16.4	0.3	1.4	1	0	0	1	1	1	1	Staphylococcus	aureus	coagulase
DUF35_N	PF12172.3	gi|568164293|ref|YP_008947766.1|	-	1.6e-07	31.0	0.1	2.3e-07	30.4	0.1	1.2	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF35	PF01796.12	gi|568164293|ref|YP_008947766.1|	-	0.00021	21.4	0.1	0.00053	20.1	0.1	1.7	1	1	0	1	1	1	1	DUF35	OB-fold	domain
zinc_ribbon_5	PF13719.1	gi|568164293|ref|YP_008947766.1|	-	0.093	12.3	1.3	0.12	11.9	0.0	1.9	2	0	0	2	2	2	0	zinc-ribbon	domain
Ribosomal_S27e	PF01667.12	gi|568164293|ref|YP_008947766.1|	-	0.27	10.8	1.9	0.8	9.2	0.1	2.2	1	1	1	2	2	2	0	Ribosomal	protein	S27
A2L_zn_ribbon	PF08792.5	gi|568164293|ref|YP_008947766.1|	-	0.95	8.9	4.2	10	5.7	0.1	2.3	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
zf-CCHC_4	PF14392.1	gi|568164293|ref|YP_008947766.1|	-	2.5	7.8	5.9	0.97	9.1	0.4	2.6	2	1	0	2	2	2	0	Zinc	knuckle
zf-H2C2_2	PF13465.1	gi|568164293|ref|YP_008947766.1|	-	5.4	7.5	5.7	0.49	10.7	0.7	1.8	2	0	0	2	2	2	0	Zinc-finger	double	domain
Thiolase_C	PF02803.13	gi|568164294|ref|YP_008947767.1|	-	4.1e-05	23.0	0.1	0.00091	18.6	0.0	2.3	2	0	0	2	2	2	1	Thiolase,	C-terminal	domain
Antitoxin-MazE	PF04014.13	gi|568164295|ref|YP_008947768.1|	-	2.5e-12	46.2	2.0	2.5e-12	46.2	1.4	1.6	1	1	0	1	1	1	1	Antidote-toxin	recognition	MazE
YcgR_2	PF12945.2	gi|568164295|ref|YP_008947768.1|	-	0.011	15.6	0.1	0.013	15.3	0.1	1.3	1	1	0	1	1	1	0	Flagellar	protein	YcgR
DUF104	PF01954.11	gi|568164295|ref|YP_008947768.1|	-	0.012	15.6	3.1	0.022	14.8	2.2	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	DUF104
Arc	PF03869.9	gi|568164295|ref|YP_008947768.1|	-	0.086	12.4	0.1	0.086	12.4	0.0	1.6	2	0	0	2	2	2	0	Arc-like	DNA	binding	domain
DUF1905	PF08922.6	gi|568164295|ref|YP_008947768.1|	-	0.099	12.2	0.0	0.15	11.6	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1905)
PIN	PF01850.16	gi|568164296|ref|YP_008947769.1|	-	4.9e-12	46.2	1.0	6.2e-12	45.9	0.7	1.0	1	0	0	1	1	1	1	PIN	domain
FAA_hydrolase	PF01557.13	gi|568164297|ref|YP_008947770.1|	-	2.3e-67	226.6	0.0	2.8e-67	226.3	0.0	1.1	1	0	0	1	1	1	1	Fumarylacetoacetate	(FAA)	hydrolase	family
Methyltransf_31	PF13847.1	gi|568164298|ref|YP_008947771.1|	-	2.1e-19	69.5	0.0	2.3e-19	69.4	0.0	1.0	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|568164298|ref|YP_008947771.1|	-	5.6e-17	62.0	0.0	6.9e-17	61.7	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|568164298|ref|YP_008947771.1|	-	2.4e-09	37.5	0.0	3e-09	37.2	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|568164298|ref|YP_008947771.1|	-	2.5e-09	37.0	0.0	2.8e-09	36.8	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|568164298|ref|YP_008947771.1|	-	2.6e-09	36.5	0.0	2.8e-09	36.4	0.0	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_18	PF12847.2	gi|568164298|ref|YP_008947771.1|	-	3.6e-09	37.1	0.0	4.9e-09	36.7	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|568164298|ref|YP_008947771.1|	-	4.3e-07	29.4	0.0	6.9e-07	28.7	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_26	PF13659.1	gi|568164298|ref|YP_008947771.1|	-	7.1e-07	29.2	0.0	1.2e-06	28.5	0.0	1.3	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|568164298|ref|YP_008947771.1|	-	1.5e-06	28.5	0.0	2.1e-06	28.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|568164298|ref|YP_008947771.1|	-	5.9e-06	25.9	0.0	8e-06	25.5	0.0	1.3	1	1	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
PrmA	PF06325.8	gi|568164298|ref|YP_008947771.1|	-	4.9e-05	22.5	0.0	6.2e-05	22.2	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_32	PF13679.1	gi|568164298|ref|YP_008947771.1|	-	0.0013	18.4	0.0	0.0017	18.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
FtsJ	PF01728.14	gi|568164298|ref|YP_008947771.1|	-	0.0018	18.3	0.0	0.0029	17.6	0.0	1.6	1	1	0	1	1	1	1	FtsJ-like	methyltransferase
GCD14	PF08704.5	gi|568164298|ref|YP_008947771.1|	-	0.0025	17.3	0.0	0.0033	16.9	0.0	1.2	1	0	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
RrnaAD	PF00398.15	gi|568164298|ref|YP_008947771.1|	-	0.004	16.2	0.0	0.0049	15.9	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
TehB	PF03848.9	gi|568164298|ref|YP_008947771.1|	-	0.0051	15.9	0.0	0.006	15.7	0.0	1.1	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
MetW	PF07021.7	gi|568164298|ref|YP_008947771.1|	-	0.012	15.0	0.0	0.015	14.7	0.0	1.1	1	0	0	1	1	1	0	Methionine	biosynthesis	protein	MetW
Methyltransf_4	PF02390.12	gi|568164298|ref|YP_008947771.1|	-	0.02	13.9	0.0	0.47	9.4	0.0	2.1	2	0	0	2	2	2	0	Putative	methyltransferase
CMAS	PF02353.15	gi|568164298|ref|YP_008947771.1|	-	0.024	13.6	0.0	0.025	13.6	0.0	1.1	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
Met_10	PF02475.11	gi|568164298|ref|YP_008947771.1|	-	0.033	13.7	0.0	0.038	13.5	0.0	1.1	1	0	0	1	1	1	0	Met-10+	like-protein
N6_N4_Mtase	PF01555.13	gi|568164298|ref|YP_008947771.1|	-	0.045	13.2	0.0	0.086	12.3	0.0	1.4	2	0	0	2	2	2	0	DNA	methylase
Methyltransf_8	PF05148.10	gi|568164298|ref|YP_008947771.1|	-	0.051	13.2	0.1	0.11	12.1	0.0	1.7	1	1	0	1	1	1	0	Hypothetical	methyltransferase
Phosphoesterase	PF04185.9	gi|568164299|ref|YP_008947772.1|	-	5.1e-71	239.8	1.8	1.1e-70	238.7	1.2	1.5	1	1	0	1	1	1	1	Phosphoesterase	family
MFMR	PF07777.6	gi|568164299|ref|YP_008947772.1|	-	0.32	10.9	2.2	0.66	9.8	1.5	1.4	1	0	0	1	1	1	0	G-box	binding	protein	MFMR
PaaA_PaaC	PF05138.7	gi|568164300|ref|YP_008947773.1|	-	2e-27	95.7	0.0	2.2e-27	95.7	0.0	1.0	1	0	0	1	1	1	1	Phenylacetic	acid	catabolic	protein
AurF	PF11583.3	gi|568164300|ref|YP_008947773.1|	-	0.072	12.0	0.0	0.14	11.0	0.0	1.4	2	0	0	2	2	2	0	P-aminobenzoate	N-oxygenase	AurF
PARP_reg	PF02877.9	gi|568164300|ref|YP_008947773.1|	-	0.076	12.6	0.4	0.17	11.5	0.1	1.8	2	0	0	2	2	2	0	Poly(ADP-ribose)	polymerase,	regulatory	domain
PaaA_PaaC	PF05138.7	gi|568164301|ref|YP_008947774.1|	-	1.3e-45	155.4	0.0	1.6e-45	155.1	0.0	1.0	1	0	0	1	1	1	1	Phenylacetic	acid	catabolic	protein
Ferritin-like	PF12902.2	gi|568164301|ref|YP_008947774.1|	-	0.11	12.0	0.0	0.18	11.4	0.0	1.3	1	0	0	1	1	1	0	Ferritin-like
ECH	PF00378.15	gi|568164302|ref|YP_008947775.1|	-	4.9e-56	189.6	0.0	5.5e-56	189.4	0.0	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
AAA_14	PF13173.1	gi|568164303|ref|YP_008947776.1|	-	1.4e-21	76.7	0.0	3.6e-21	75.3	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
DUF4143	PF13635.1	gi|568164303|ref|YP_008947776.1|	-	6.8e-08	32.5	0.0	1.8e-07	31.1	0.0	1.5	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4143)
Arch_ATPase	PF01637.13	gi|568164303|ref|YP_008947776.1|	-	0.0042	16.8	0.1	0.02	14.6	0.0	2.0	2	0	0	2	2	2	1	Archaeal	ATPase
FtsK_SpoIIIE	PF01580.13	gi|568164303|ref|YP_008947776.1|	-	0.05	13.0	0.0	0.083	12.3	0.0	1.3	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
NACHT	PF05729.7	gi|568164303|ref|YP_008947776.1|	-	0.057	13.0	0.0	0.11	12.1	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
DsrD	PF08679.6	gi|568164303|ref|YP_008947776.1|	-	0.057	13.4	0.5	10	6.2	0.2	2.8	2	0	0	2	2	2	0	Dissimilatory	sulfite	reductase	D	(DsrD)
AAA	PF00004.24	gi|568164303|ref|YP_008947776.1|	-	0.08	13.1	0.0	0.17	12.0	0.0	1.5	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.1	gi|568164303|ref|YP_008947776.1|	-	0.093	12.7	0.0	0.17	11.8	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
DNA_pol3_delta2	PF13177.1	gi|568164303|ref|YP_008947776.1|	-	0.11	12.1	0.0	0.18	11.4	0.0	1.4	1	0	0	1	1	1	0	DNA	polymerase	III,	delta	subunit
AAA_22	PF13401.1	gi|568164303|ref|YP_008947776.1|	-	0.15	12.1	0.0	0.29	11.2	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AMP-binding	PF00501.23	gi|568164304|ref|YP_008947777.1|	-	9.5e-83	277.8	0.0	1.2e-82	277.5	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|568164304|ref|YP_008947777.1|	-	9.3e-20	71.3	0.5	2e-19	70.2	0.4	1.6	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
PaaX_C	PF08223.6	gi|568164305|ref|YP_008947778.1|	-	1.9e-52	177.4	0.0	2.7e-52	176.9	0.0	1.2	1	0	0	1	1	1	1	PaaX-like	protein	C-terminal	domain
PaaX	PF07848.7	gi|568164305|ref|YP_008947778.1|	-	3.9e-16	58.8	0.1	6.3e-16	58.1	0.0	1.3	1	0	0	1	1	1	1	PaaX-like	protein
LexA_DNA_bind	PF01726.11	gi|568164305|ref|YP_008947778.1|	-	0.0056	16.2	0.0	0.023	14.2	0.0	1.9	2	0	0	2	2	2	1	LexA	DNA	binding	domain
GntR	PF00392.16	gi|568164305|ref|YP_008947778.1|	-	0.11	12.0	0.0	0.58	9.6	0.0	2.1	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
FliD_C	PF07195.7	gi|568164305|ref|YP_008947778.1|	-	0.15	11.3	0.1	0.39	9.9	0.1	1.6	1	0	0	1	1	1	0	Flagellar	hook-associated	protein	2	C-terminus
YjgP_YjgQ	PF03739.9	gi|568164306|ref|YP_008947779.1|	-	0.2	10.3	12.9	0.16	10.7	8.0	1.6	1	1	0	1	1	1	0	Predicted	permease	YjgP/YjgQ	family
Rab5ip	PF07019.7	gi|568164306|ref|YP_008947779.1|	-	4.6	7.4	19.0	0.14	12.2	1.1	2.9	1	1	2	3	3	3	0	Rab5-interacting	protein	(Rab5ip)
Penicil_amidase	PF01804.13	gi|568164307|ref|YP_008947780.1|	-	4.7e-185	617.7	1.8	5.3e-185	617.5	1.2	1.0	1	0	0	1	1	1	1	Penicillin	amidase
Acyl-CoA_dh_1	PF00441.19	gi|568164308|ref|YP_008947782.1|	-	5.1e-36	124.0	0.0	8.2e-36	123.3	0.0	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|568164308|ref|YP_008947782.1|	-	7.8e-11	41.3	0.2	1.4e-10	40.5	0.1	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.6	gi|568164308|ref|YP_008947782.1|	-	4.7e-07	30.1	0.0	8.5e-07	29.2	0.0	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
AMP-binding	PF00501.23	gi|568164309|ref|YP_008947783.1|	-	6.8e-77	258.6	0.0	8.5e-77	258.2	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|568164309|ref|YP_008947783.1|	-	1.3e-13	51.6	0.0	2.7e-13	50.6	0.0	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
Peptidase_C15	PF01470.12	gi|568164310|ref|YP_008947784.1|	-	8e-21	74.8	0.0	8.2e-21	74.7	0.0	1.0	1	0	0	1	1	1	1	Pyroglutamyl	peptidase
Amidohydro_1	PF01979.15	gi|568164311|ref|YP_008947786.1|	-	7e-43	147.5	0.0	8.3e-43	147.2	0.0	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|568164311|ref|YP_008947786.1|	-	8.1e-15	55.5	0.0	9.3e-07	29.1	0.0	2.5	1	1	0	2	2	2	2	Amidohydrolase
Amidohydro_5	PF13594.1	gi|568164311|ref|YP_008947786.1|	-	7.5e-10	38.4	0.9	1.4e-09	37.6	0.1	2.0	2	0	0	2	2	2	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|568164311|ref|YP_008947786.1|	-	1.5e-06	27.6	0.8	0.01	15.1	0.0	3.0	2	2	0	2	2	2	2	Amidohydrolase	family
HHH_5	PF14520.1	gi|568164311|ref|YP_008947786.1|	-	0.093	12.9	0.1	2	8.6	0.0	2.8	3	0	0	3	3	3	0	Helix-hairpin-helix	domain
Sugar_tr	PF00083.19	gi|568164312|ref|YP_008947787.1|	-	1.8e-39	135.6	27.1	2.5e-39	135.1	18.8	1.2	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|568164312|ref|YP_008947787.1|	-	7.4e-32	110.4	89.8	1.6e-27	96.1	35.8	3.5	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
DUF485	PF04341.7	gi|568164312|ref|YP_008947787.1|	-	0.021	14.5	0.3	0.021	14.5	0.2	4.1	3	1	0	4	4	4	0	Protein	of	unknown	function,	DUF485
DUF1228	PF06779.9	gi|568164312|ref|YP_008947787.1|	-	0.034	14.1	4.2	0.38	10.8	0.1	3.3	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1228)
ABC2_membrane_2	PF12679.2	gi|568164912|ref|YP_008947788.1|	-	1.8e-26	92.6	0.0	5.5e-26	91.0	0.0	1.8	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_5	PF13346.1	gi|568164912|ref|YP_008947788.1|	-	4.8e-07	29.2	26.8	4.8e-07	29.2	18.6	3.0	2	1	0	2	2	2	1	ABC-2	family	transporter	protein
CarboxypepD_reg	PF13620.1	gi|568164912|ref|YP_008947788.1|	-	4.3e-06	26.6	2.6	4.3e-06	26.6	1.8	2.8	2	1	0	2	2	2	1	Carboxypeptidase	regulatory-like	domain
DUF4480	PF13715.1	gi|568164912|ref|YP_008947788.1|	-	0.0029	17.6	1.1	0.0083	16.1	0.8	1.8	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4480)
ABC2_membrane_4	PF12730.2	gi|568164912|ref|YP_008947788.1|	-	0.068	12.3	60.8	2.3	7.2	42.0	3.0	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
ABC2_membrane_3	PF12698.2	gi|568164912|ref|YP_008947788.1|	-	0.22	10.5	52.0	3.4	6.5	35.8	2.4	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
DUF3353	PF11833.3	gi|568164912|ref|YP_008947788.1|	-	4.1	6.8	10.2	0.13	11.7	1.3	2.5	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3353)
Radical_SAM	PF04055.16	gi|568164914|ref|YP_008947790.1|	-	1.8e-07	31.4	0.0	2.3e-07	31.1	0.0	1.1	1	0	0	1	1	1	1	Radical	SAM	superfamily
OrfB_Zn_ribbon	PF07282.6	gi|568164313|ref|YP_008947791.1|	-	6.8e-19	67.2	1.4	1.1e-17	63.3	0.2	2.5	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|568164313|ref|YP_008947791.1|	-	3.3e-09	36.5	1.2	5.5e-09	35.7	0.9	1.3	1	0	0	1	1	1	1	Probable	transposase
zf-TFIIB	PF13453.1	gi|568164313|ref|YP_008947791.1|	-	0.095	11.9	1.2	0.2	10.8	0.8	1.5	1	0	0	1	1	1	0	Transcription	factor	zinc-finger
Integrase_Zn	PF02022.14	gi|568164313|ref|YP_008947791.1|	-	0.15	11.5	0.5	1.4	8.4	0.0	2.5	2	0	0	2	2	2	0	Integrase	Zinc	binding	domain
TF_Zn_Ribbon	PF08271.7	gi|568164313|ref|YP_008947791.1|	-	0.24	10.7	1.4	0.48	9.7	1.0	1.4	1	0	0	1	1	1	0	TFIIB	zinc-binding
DUF643	PF04867.7	gi|568164313|ref|YP_008947791.1|	-	0.32	11.4	4.8	0.84	10.0	1.1	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF643)
DUF4401	PF14351.1	gi|568164314|ref|YP_008947793.1|	-	0.35	9.8	10.2	0.43	9.5	7.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4401)
DUF2678	PF10856.3	gi|568164314|ref|YP_008947793.1|	-	0.38	10.4	5.1	0.39	10.4	3.0	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2678)
COX4_pro	PF03626.9	gi|568164314|ref|YP_008947793.1|	-	1.1	9.4	7.0	2.7	8.1	0.7	2.1	1	1	1	2	2	2	0	Prokaryotic	Cytochrome	C	oxidase	subunit	IV
PGG	PF13962.1	gi|568164314|ref|YP_008947793.1|	-	2.9	7.5	8.3	0.23	11.1	2.2	1.7	2	0	0	2	2	2	0	Domain	of	unknown	function
YqhR	PF11085.3	gi|568164314|ref|YP_008947793.1|	-	7.3	6.0	9.1	0.23	10.9	0.9	1.9	1	1	0	2	2	2	0	Conserved	membrane	protein	YqhR
DUF131	PF01998.12	gi|568164314|ref|YP_008947793.1|	-	7.5	5.9	7.7	22	4.4	0.0	2.8	3	0	0	3	3	3	0	Protein	of	unknown	function	DUF131
HTH_5	PF01022.15	gi|568164315|ref|YP_008947794.1|	-	4.9e-10	38.9	0.2	8.5e-10	38.1	0.1	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
TrmB	PF01978.14	gi|568164315|ref|YP_008947794.1|	-	0.00018	21.1	0.1	0.00041	19.9	0.0	1.6	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_24	PF13412.1	gi|568164315|ref|YP_008947794.1|	-	0.00043	19.6	0.4	0.00043	19.6	0.3	1.8	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|568164315|ref|YP_008947794.1|	-	0.00067	19.2	0.3	0.0015	18.1	0.0	1.7	2	0	0	2	2	2	1	HTH	domain
HTH_20	PF12840.2	gi|568164315|ref|YP_008947794.1|	-	0.0012	18.6	0.0	0.0022	17.7	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_40	PF14493.1	gi|568164315|ref|YP_008947794.1|	-	0.0015	18.7	0.6	0.002	18.2	0.1	1.5	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_28	PF13518.1	gi|568164315|ref|YP_008947794.1|	-	0.0024	17.8	0.0	0.0042	17.0	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_45	PF14947.1	gi|568164315|ref|YP_008947794.1|	-	0.003	17.3	0.7	0.0058	16.4	0.4	1.5	1	1	0	1	1	1	1	Winged	helix-turn-helix
GerE	PF00196.14	gi|568164315|ref|YP_008947794.1|	-	0.011	15.0	0.2	0.017	14.3	0.1	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
HTH_34	PF13601.1	gi|568164315|ref|YP_008947794.1|	-	0.017	15.1	0.1	0.023	14.6	0.1	1.2	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_38	PF13936.1	gi|568164315|ref|YP_008947794.1|	-	0.05	13.1	0.0	0.2	11.2	0.0	1.9	2	0	0	2	2	2	0	Helix-turn-helix	domain
MotA_activ	PF09114.5	gi|568164315|ref|YP_008947794.1|	-	0.061	13.0	0.1	0.078	12.7	0.1	1.2	1	0	0	1	1	1	0	Transcription	factor	MotA,	activation	domain
HTH_23	PF13384.1	gi|568164315|ref|YP_008947794.1|	-	0.066	12.8	0.0	0.14	11.8	0.0	1.5	1	0	0	1	1	1	0	Homeodomain-like	domain
Rrf2	PF02082.15	gi|568164315|ref|YP_008947794.1|	-	0.12	12.4	0.0	0.17	12.0	0.0	1.4	1	0	0	1	1	1	0	Transcriptional	regulator
NUMOD1	PF07453.8	gi|568164315|ref|YP_008947794.1|	-	0.15	11.9	0.5	0.36	10.7	0.3	1.7	1	1	0	1	1	1	0	NUMOD1	domain
DUF4363	PF14276.1	gi|568164316|ref|YP_008947795.1|	-	0.074	12.7	1.7	0.16	11.6	1.2	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4363)
MFS_1	PF07690.11	gi|568164317|ref|YP_008947796.1|	-	1.4e-28	99.6	42.6	1.6e-23	83.0	15.9	2.5	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|568164317|ref|YP_008947796.1|	-	8.6e-06	24.5	10.4	8.6e-06	24.5	7.2	1.9	2	1	0	2	2	2	1	Sugar	(and	other)	transporter
MFS_2	PF13347.1	gi|568164317|ref|YP_008947796.1|	-	0.00013	20.4	17.1	0.00047	18.6	2.2	2.4	1	1	1	2	2	2	2	MFS/sugar	transport	protein
LacY_symp	PF01306.14	gi|568164317|ref|YP_008947796.1|	-	0.00019	20.0	19.9	0.022	13.3	1.1	2.8	2	1	1	3	3	3	2	LacY	proton/sugar	symporter
MFS_3	PF05977.8	gi|568164317|ref|YP_008947796.1|	-	0.00054	18.1	1.5	0.00081	17.6	1.0	1.2	1	0	0	1	1	1	1	Transmembrane	secretion	effector
PIN	PF01850.16	gi|568164318|ref|YP_008947797.1|	-	9.7e-11	42.0	0.3	1.1e-10	41.8	0.2	1.0	1	0	0	1	1	1	1	PIN	domain
RHH_1	PF01402.16	gi|568164319|ref|YP_008947798.1|	-	0.076	12.9	0.5	0.076	12.9	0.4	2.6	3	0	0	3	3	3	0	Ribbon-helix-helix	protein,	copG	family
adh_short	PF00106.20	gi|568164320|ref|YP_008947799.1|	-	7.3e-29	100.8	0.0	9.8e-29	100.4	0.0	1.2	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|568164320|ref|YP_008947799.1|	-	4.6e-23	82.2	0.0	5.9e-23	81.8	0.0	1.1	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|568164320|ref|YP_008947799.1|	-	7e-09	35.5	0.0	1.1e-08	35.0	0.0	1.2	1	0	0	1	1	1	1	KR	domain
DUF1776	PF08643.5	gi|568164320|ref|YP_008947799.1|	-	7.2e-08	31.9	0.1	1.7e-06	27.4	0.1	2.0	1	1	0	1	1	1	1	Fungal	family	of	unknown	function	(DUF1776)
Epimerase	PF01370.16	gi|568164320|ref|YP_008947799.1|	-	1.2e-05	24.8	0.0	2.1e-05	24.1	0.0	1.5	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
3HCDH_N	PF02737.13	gi|568164320|ref|YP_008947799.1|	-	0.11	12.1	0.0	0.24	11.0	0.0	1.6	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
HTH_45	PF14947.1	gi|568164321|ref|YP_008947800.1|	-	1.5e-18	66.3	4.2	1.8e-18	66.1	2.9	1.0	1	0	0	1	1	1	1	Winged	helix-turn-helix
DUF4393	PF14337.1	gi|568164321|ref|YP_008947800.1|	-	0.013	14.9	0.3	0.013	14.9	0.2	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4393)
HemN_C	PF06969.11	gi|568164321|ref|YP_008947800.1|	-	0.015	15.3	0.0	0.021	14.8	0.0	1.3	1	0	0	1	1	1	0	HemN	C-terminal	domain
DUF4364	PF14277.1	gi|568164321|ref|YP_008947800.1|	-	0.021	14.4	0.3	0.025	14.1	0.2	1.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4364)
Ribosomal_S19e	PF01090.14	gi|568164321|ref|YP_008947800.1|	-	0.046	13.1	0.0	0.048	13.0	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	protein	S19e
Peptidase_S24	PF00717.18	gi|568164323|ref|YP_008947802.1|	-	0.0001	21.8	0.6	0.00023	20.7	0.4	1.6	1	0	0	1	1	1	1	Peptidase	S24-like
Autotrns_rpt	PF12951.2	gi|568164324|ref|YP_008947804.1|	-	1.7	8.3	4.7	0.77	9.5	1.3	1.9	2	0	0	2	2	2	0	Autotransporter-associated	beta	strand	repeat
HTH_45	PF14947.1	gi|568164917|ref|YP_008947805.1|	-	0.0012	18.5	0.1	0.003	17.3	0.0	1.7	2	0	0	2	2	2	1	Winged	helix-turn-helix
DUF2721	PF11026.3	gi|568164918|ref|YP_008947806.1|	-	0.0016	18.0	0.2	0.0023	17.5	0.2	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2721)
Muted	PF14942.1	gi|568164918|ref|YP_008947806.1|	-	0.022	14.6	0.5	0.038	13.8	0.2	1.4	1	1	0	1	1	1	0	Organelle	biogenesis,	Muted-like	protein
TraG_N	PF07916.6	gi|568164325|ref|YP_008947807.1|	-	0.087	11.2	4.6	0.42	8.9	0.0	2.0	1	1	0	2	2	2	0	TraG-like	protein,	N-terminal	region
LysE	PF01810.13	gi|568164325|ref|YP_008947807.1|	-	0.6	9.3	12.1	3.2	6.9	8.4	2.4	1	1	0	1	1	1	0	LysE	type	translocator
ABC_tran	PF00005.22	gi|568164326|ref|YP_008947808.1|	-	7.5e-29	100.7	0.0	1.3e-28	100.0	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|568164326|ref|YP_008947808.1|	-	1.1e-15	58.3	5.5	3.3e-09	37.1	0.0	2.9	2	1	1	3	3	3	2	AAA	domain
AAA_15	PF13175.1	gi|568164326|ref|YP_008947808.1|	-	2e-06	27.1	0.1	0.0017	17.4	0.4	2.1	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_29	PF13555.1	gi|568164326|ref|YP_008947808.1|	-	2.9e-05	23.4	0.3	7.2e-05	22.2	0.1	1.7	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
Rad17	PF03215.10	gi|568164326|ref|YP_008947808.1|	-	0.00013	20.8	0.0	0.00018	20.3	0.0	1.1	1	0	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
AAA_23	PF13476.1	gi|568164326|ref|YP_008947808.1|	-	0.0012	19.2	1.3	0.0015	18.8	0.9	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|568164326|ref|YP_008947808.1|	-	0.0029	17.7	0.2	0.012	15.7	0.2	2.1	1	1	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|568164326|ref|YP_008947808.1|	-	0.0043	16.2	0.1	0.0072	15.5	0.1	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
SMC_N	PF02463.14	gi|568164326|ref|YP_008947808.1|	-	0.0065	15.7	0.1	0.25	10.5	0.1	2.2	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
AAA_17	PF13207.1	gi|568164326|ref|YP_008947808.1|	-	0.0091	16.8	0.2	0.058	14.2	0.0	2.2	2	1	0	2	2	2	1	AAA	domain
AAA_19	PF13245.1	gi|568164326|ref|YP_008947808.1|	-	0.016	14.9	0.0	0.054	13.2	0.0	1.9	2	0	0	2	2	2	0	Part	of	AAA	domain
IstB_IS21	PF01695.12	gi|568164326|ref|YP_008947808.1|	-	0.016	14.6	0.0	0.31	10.4	0.0	2.2	2	0	0	2	2	2	0	IstB-like	ATP	binding	protein
AAA_16	PF13191.1	gi|568164326|ref|YP_008947808.1|	-	0.018	15.0	0.2	0.055	13.4	0.1	1.8	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_28	PF13521.1	gi|568164326|ref|YP_008947808.1|	-	0.021	14.7	0.0	0.046	13.6	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|568164326|ref|YP_008947808.1|	-	0.035	13.5	0.5	2.1	7.6	0.1	2.4	2	1	0	2	2	2	0	AAA-like	domain
AAA	PF00004.24	gi|568164326|ref|YP_008947808.1|	-	0.049	13.8	0.1	0.13	12.4	0.1	1.9	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_18	PF13238.1	gi|568164326|ref|YP_008947808.1|	-	0.06	13.6	1.2	0.17	12.1	0.1	2.0	2	0	0	2	2	2	0	AAA	domain
MobB	PF03205.9	gi|568164326|ref|YP_008947808.1|	-	0.083	12.5	0.1	0.18	11.4	0.1	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_33	PF13671.1	gi|568164326|ref|YP_008947808.1|	-	0.11	12.3	0.0	0.27	11.0	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
AAA_24	PF13479.1	gi|568164326|ref|YP_008947808.1|	-	0.13	11.8	0.1	0.53	9.8	0.1	1.8	2	0	0	2	2	2	0	AAA	domain
Mg_chelatase	PF01078.16	gi|568164326|ref|YP_008947808.1|	-	0.16	11.1	0.1	0.25	10.4	0.0	1.2	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
SRP54	PF00448.17	gi|568164326|ref|YP_008947808.1|	-	0.17	11.3	0.1	0.29	10.5	0.1	1.4	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
NACHT	PF05729.7	gi|568164326|ref|YP_008947808.1|	-	0.44	10.1	1.9	0.82	9.3	0.1	2.1	2	1	0	2	2	2	0	NACHT	domain
ABC2_membrane	PF01061.19	gi|568164327|ref|YP_008947809.1|	-	1e-15	57.5	26.2	1.8e-15	56.7	18.1	1.4	1	1	0	1	1	1	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.2	gi|568164327|ref|YP_008947809.1|	-	3.1e-05	23.1	30.8	5.4e-05	22.3	21.4	1.4	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
Romo1	PF10247.4	gi|568164327|ref|YP_008947809.1|	-	0.11	12.7	1.6	0.36	11.0	0.1	2.3	2	0	0	2	2	2	0	Reactive	mitochondrial	oxygen	species	modulator	1
DUF520	PF04461.8	gi|568164328|ref|YP_008947810.1|	-	0.013	15.3	1.1	0.02	14.7	0.8	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF520)
Fer4_10	PF13237.1	gi|568164329|ref|YP_008947811.1|	-	5.1e-07	29.4	5.8	8e-07	28.7	4.0	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|568164329|ref|YP_008947811.1|	-	5.6e-06	26.5	4.6	1.2e-05	25.4	3.2	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|568164329|ref|YP_008947811.1|	-	0.00014	22.2	16.1	0.00019	21.7	5.8	2.0	2	1	2	4	4	3	3	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|568164329|ref|YP_008947811.1|	-	0.00021	21.0	9.5	0.09	12.6	0.5	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|568164329|ref|YP_008947811.1|	-	0.00033	20.3	9.0	0.031	14.1	1.9	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|568164329|ref|YP_008947811.1|	-	0.00034	20.5	6.1	0.00071	19.5	2.8	2.3	2	1	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_11	PF13247.1	gi|568164329|ref|YP_008947811.1|	-	0.00093	19.0	1.5	0.0022	17.8	1.0	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|568164329|ref|YP_008947811.1|	-	0.0056	16.2	12.6	0.056	13.0	0.5	3.0	2	1	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|568164329|ref|YP_008947811.1|	-	0.051	14.3	3.3	0.68	10.7	0.1	2.4	2	0	0	2	2	2	0	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.1	gi|568164329|ref|YP_008947811.1|	-	0.091	12.6	6.2	0.27	11.1	4.3	1.8	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|568164329|ref|YP_008947811.1|	-	0.092	13.3	13.3	1.6	9.4	1.1	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|568164329|ref|YP_008947811.1|	-	0.28	11.6	8.1	0.76	10.2	0.1	2.9	3	0	0	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|568164329|ref|YP_008947811.1|	-	0.33	11.3	9.3	39	4.6	6.6	2.6	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_20	PF14691.1	gi|568164329|ref|YP_008947811.1|	-	0.82	9.3	5.5	0.65	9.6	0.9	2.3	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
AIM24	PF01987.12	gi|568164330|ref|YP_008947812.1|	-	2.3e-56	190.6	2.9	2.6e-56	190.4	2.0	1.0	1	0	0	1	1	1	1	Mitochondrial	biogenesis	AIM24
DUF2173	PF09941.4	gi|568164331|ref|YP_008947813.1|	-	6.4e-42	141.8	0.6	7.2e-42	141.7	0.4	1.0	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2173)
MS_channel	PF00924.13	gi|568164332|ref|YP_008947815.1|	-	4.6e-24	84.8	3.8	4.6e-24	84.8	2.7	1.5	2	0	0	2	2	2	1	Mechanosensitive	ion	channel
Rhomboid	PF01694.17	gi|568164332|ref|YP_008947815.1|	-	0.17	11.9	10.3	0.24	11.4	7.1	1.2	1	0	0	1	1	1	0	Rhomboid	family
SUR7	PF06687.7	gi|568164332|ref|YP_008947815.1|	-	0.18	11.3	2.2	0.31	10.5	1.5	1.4	1	0	0	1	1	1	0	SUR7/PalI	family
DUF2975	PF11188.3	gi|568164332|ref|YP_008947815.1|	-	0.26	11.0	12.4	0.15	11.7	2.9	2.3	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2975)
DUF2842	PF11003.3	gi|568164332|ref|YP_008947815.1|	-	2.7	7.9	8.4	9.3	6.2	1.0	2.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2842)
Glycoprotein_B	PF00606.13	gi|568164333|ref|YP_008947816.1|	-	0.8	7.6	2.9	1.1	7.2	2.0	1.1	1	0	0	1	1	1	0	Herpesvirus	Glycoprotein	B
Glycos_transf_1	PF00534.15	gi|568164334|ref|YP_008947817.1|	-	3.7e-19	68.7	0.0	7.2e-19	67.8	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|568164334|ref|YP_008947817.1|	-	2.7e-07	30.8	0.0	6.3e-07	29.6	0.0	1.7	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|568164334|ref|YP_008947817.1|	-	0.0065	16.2	0.2	0.018	14.7	0.1	1.8	1	1	0	1	1	1	1	Glycosyltransferase	Family	4
Epimerase	PF01370.16	gi|568164920|ref|YP_008947818.1|	-	0.00033	20.1	0.0	0.00044	19.7	0.0	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
B	PF02216.11	gi|568164921|ref|YP_008947819.1|	-	0.064	13.0	0.0	0.15	11.8	0.0	1.6	2	0	0	2	2	2	0	B	domain
Glycos_transf_2	PF00535.21	gi|568164335|ref|YP_008947820.1|	-	1.1e-18	67.5	0.4	1.6e-18	66.9	0.2	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|568164335|ref|YP_008947820.1|	-	4.5e-11	42.9	0.0	6.6e-11	42.4	0.0	1.6	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
DUF2661	PF10860.3	gi|568164335|ref|YP_008947820.1|	-	0.17	12.0	3.6	3.4	7.8	0.3	2.9	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2661)
Glycos_transf_1	PF00534.15	gi|568164336|ref|YP_008947821.1|	-	1.1e-16	60.7	0.0	2.4e-16	59.6	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|568164336|ref|YP_008947821.1|	-	1.1e-11	44.9	0.0	1.9e-11	44.2	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|568164336|ref|YP_008947821.1|	-	3.4e-05	24.0	0.0	8.4e-05	22.7	0.0	1.7	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Lactamase_B	PF00753.22	gi|568164337|ref|YP_008947823.1|	-	1.4e-25	90.0	0.1	1.9e-25	89.6	0.1	1.1	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|568164337|ref|YP_008947823.1|	-	2.7e-05	23.8	0.0	5.9e-05	22.6	0.0	1.5	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|568164337|ref|YP_008947823.1|	-	0.0059	16.3	0.0	0.008	15.8	0.0	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Rhodanese	PF00581.15	gi|568164337|ref|YP_008947823.1|	-	0.15	12.4	0.0	2.6	8.4	0.0	2.1	2	0	0	2	2	2	0	Rhodanese-like	domain
CbiQ	PF02361.11	gi|568164339|ref|YP_008947825.1|	-	1.4e-22	80.3	12.4	1.4e-22	80.3	8.6	2.1	3	0	0	3	3	3	1	Cobalt	transport	protein
Adipogenin	PF15202.1	gi|568164339|ref|YP_008947825.1|	-	0.097	12.5	0.3	0.097	12.5	0.2	3.1	2	1	1	3	3	3	0	Adipogenin
ABC_tran	PF00005.22	gi|568164340|ref|YP_008947826.1|	-	7.5e-48	162.3	0.0	9.7e-23	80.9	0.0	2.2	2	0	0	2	2	2	2	ABC	transporter
AAA_21	PF13304.1	gi|568164340|ref|YP_008947826.1|	-	7.2e-25	88.5	1.0	8.1e-13	48.9	0.0	4.2	3	1	0	3	3	3	3	AAA	domain
AAA_23	PF13476.1	gi|568164340|ref|YP_008947826.1|	-	2.4e-11	44.3	0.1	6.5e-06	26.6	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|568164340|ref|YP_008947826.1|	-	4.4e-11	42.4	3.3	5e-05	22.6	0.2	3.9	2	2	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|568164340|ref|YP_008947826.1|	-	2e-10	40.0	0.5	3.7e-05	23.1	0.0	2.5	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.1	gi|568164340|ref|YP_008947826.1|	-	2.1e-10	40.2	0.2	0.0029	16.7	0.6	4.1	4	0	0	4	4	4	2	AAA	ATPase	domain
AAA_16	PF13191.1	gi|568164340|ref|YP_008947826.1|	-	1.2e-07	31.8	0.0	0.00042	20.3	0.0	2.3	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_17	PF13207.1	gi|568164340|ref|YP_008947826.1|	-	2.4e-07	31.5	0.9	0.015	16.0	0.0	3.0	2	0	0	2	2	2	2	AAA	domain
AAA_25	PF13481.1	gi|568164340|ref|YP_008947826.1|	-	8.4e-07	28.5	0.1	0.06	12.7	0.0	3.1	3	0	0	3	3	3	2	AAA	domain
AAA_22	PF13401.1	gi|568164340|ref|YP_008947826.1|	-	2.7e-06	27.5	2.9	0.061	13.4	0.1	3.4	3	1	0	3	3	3	2	AAA	domain
DUF258	PF03193.11	gi|568164340|ref|YP_008947826.1|	-	2.7e-06	26.6	0.2	0.055	12.6	0.0	2.4	2	0	0	2	2	2	2	Protein	of	unknown	function,	DUF258
AAA_30	PF13604.1	gi|568164340|ref|YP_008947826.1|	-	5.1e-06	26.2	1.1	0.015	14.8	0.0	2.7	3	0	0	3	3	3	2	AAA	domain
NTPase_1	PF03266.10	gi|568164340|ref|YP_008947826.1|	-	7.8e-06	25.6	2.8	0.079	12.6	0.1	3.3	3	0	0	3	3	3	2	NTPase
NACHT	PF05729.7	gi|568164340|ref|YP_008947826.1|	-	3e-05	23.7	0.1	0.25	11.0	0.0	2.4	2	0	0	2	2	2	2	NACHT	domain
FtsK_SpoIIIE	PF01580.13	gi|568164340|ref|YP_008947826.1|	-	4e-05	23.1	0.1	0.27	10.6	0.0	2.4	2	0	0	2	2	2	2	FtsK/SpoIIIE	family
Mg_chelatase	PF01078.16	gi|568164340|ref|YP_008947826.1|	-	6.6e-05	22.1	0.2	0.0086	15.2	0.0	2.4	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_19	PF13245.1	gi|568164340|ref|YP_008947826.1|	-	7.1e-05	22.4	0.1	0.2	11.4	0.0	3.1	3	0	0	3	3	3	1	Part	of	AAA	domain
AAA_18	PF13238.1	gi|568164340|ref|YP_008947826.1|	-	7.8e-05	22.9	7.6	0.23	11.7	0.3	4.2	3	1	0	3	3	3	2	AAA	domain
MobB	PF03205.9	gi|568164340|ref|YP_008947826.1|	-	9.4e-05	22.1	1.5	0.39	10.4	0.0	3.5	4	0	0	4	4	3	2	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
IstB_IS21	PF01695.12	gi|568164340|ref|YP_008947826.1|	-	0.0001	21.7	0.3	0.57	9.5	0.0	3.2	3	0	0	3	3	3	1	IstB-like	ATP	binding	protein
PduV-EutP	PF10662.4	gi|568164340|ref|YP_008947826.1|	-	0.00012	21.5	0.8	0.16	11.4	0.0	3.3	4	0	0	4	4	3	1	Ethanolamine	utilisation	-	propanediol	utilisation
SbcCD_C	PF13558.1	gi|568164340|ref|YP_008947826.1|	-	0.00018	21.3	0.1	0.033	14.1	0.1	3.3	2	1	0	2	2	2	1	Putative	exonuclease	SbcCD,	C	subunit
T2SE	PF00437.15	gi|568164340|ref|YP_008947826.1|	-	0.00024	20.1	3.7	0.2	10.5	0.1	2.9	3	0	0	3	3	3	2	Type	II/IV	secretion	system	protein
UPF0079	PF02367.12	gi|568164340|ref|YP_008947826.1|	-	0.00046	19.8	0.5	0.088	12.4	0.1	2.4	2	0	0	2	2	2	1	Uncharacterised	P-loop	hydrolase	UPF0079
Miro	PF08477.8	gi|568164340|ref|YP_008947826.1|	-	0.00095	19.6	0.8	0.76	10.2	0.0	2.8	2	0	0	2	2	2	1	Miro-like	protein
AAA_10	PF12846.2	gi|568164340|ref|YP_008947826.1|	-	0.0015	18.0	3.1	0.16	11.3	0.2	2.7	3	1	0	3	3	2	1	AAA-like	domain
RNA_helicase	PF00910.17	gi|568164340|ref|YP_008947826.1|	-	0.0025	17.9	0.4	1.7	8.8	0.0	2.7	2	0	0	2	2	2	1	RNA	helicase
ABC_ATPase	PF09818.4	gi|568164340|ref|YP_008947826.1|	-	0.003	16.1	1.6	0.9	8.0	0.1	3.1	3	0	0	3	3	3	1	Predicted	ATPase	of	the	ABC	class
KaiC	PF06745.8	gi|568164340|ref|YP_008947826.1|	-	0.0031	16.6	0.7	0.22	10.6	0.1	2.7	3	0	0	3	3	2	1	KaiC
AAA	PF00004.24	gi|568164340|ref|YP_008947826.1|	-	0.0037	17.4	0.4	0.31	11.2	0.0	2.9	3	0	0	3	3	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
PRK	PF00485.13	gi|568164340|ref|YP_008947826.1|	-	0.0038	16.8	0.1	1.9	8.0	0.0	2.4	2	0	0	2	2	2	1	Phosphoribulokinase	/	Uridine	kinase	family
AAA_33	PF13671.1	gi|568164340|ref|YP_008947826.1|	-	0.0039	17.0	0.2	2	8.3	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
MMR_HSR1	PF01926.18	gi|568164340|ref|YP_008947826.1|	-	0.0046	16.9	2.1	2.1	8.3	0.1	2.8	2	1	0	2	2	2	1	50S	ribosome-binding	GTPase
DUF87	PF01935.12	gi|568164340|ref|YP_008947826.1|	-	0.0057	16.5	0.5	1.1	9.0	0.1	3.0	3	0	0	3	3	2	1	Domain	of	unknown	function	DUF87
ATP-synt_ab	PF00006.20	gi|568164340|ref|YP_008947826.1|	-	0.01	15.3	0.0	1.1	8.7	0.0	2.4	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
NB-ARC	PF00931.17	gi|568164340|ref|YP_008947826.1|	-	0.021	13.6	0.3	2	7.1	0.0	2.3	2	0	0	2	2	2	0	NB-ARC	domain
AAA_5	PF07728.9	gi|568164340|ref|YP_008947826.1|	-	0.026	14.2	1.0	6.4	6.5	0.0	2.9	2	1	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
AAA_24	PF13479.1	gi|568164340|ref|YP_008947826.1|	-	0.032	13.8	1.8	3	7.3	0.1	2.8	3	0	0	3	3	2	0	AAA	domain
Herpes_Helicase	PF02689.9	gi|568164340|ref|YP_008947826.1|	-	0.033	11.9	0.5	1.7	6.2	0.2	2.1	2	0	0	2	2	2	0	Helicase
Zeta_toxin	PF06414.7	gi|568164340|ref|YP_008947826.1|	-	0.042	12.9	1.1	5.7	5.9	0.1	2.7	3	0	0	3	3	2	0	Zeta	toxin
ATP_bind_2	PF03668.10	gi|568164340|ref|YP_008947826.1|	-	0.044	12.8	1.3	4.4	6.3	0.0	2.4	2	0	0	2	2	2	0	P-loop	ATPase	protein	family
ATP_bind_1	PF03029.12	gi|568164340|ref|YP_008947826.1|	-	0.05	13.1	3.2	3.9	6.9	0.0	2.7	3	0	0	3	3	3	0	Conserved	hypothetical	ATP	binding	protein
SRP54	PF00448.17	gi|568164340|ref|YP_008947826.1|	-	0.064	12.6	2.7	0.19	11.1	0.3	2.4	3	0	0	3	3	2	0	SRP54-type	protein,	GTPase	domain
AAA_28	PF13521.1	gi|568164340|ref|YP_008947826.1|	-	0.065	13.2	4.6	0.58	10.1	0.1	2.4	2	0	0	2	2	2	0	AAA	domain
DUF815	PF05673.8	gi|568164340|ref|YP_008947826.1|	-	0.067	12.1	0.2	1.1	8.1	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF815)
cobW	PF02492.14	gi|568164340|ref|YP_008947826.1|	-	0.076	12.4	1.5	6.5	6.1	0.1	2.5	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
APS_kinase	PF01583.15	gi|568164340|ref|YP_008947826.1|	-	0.1	12.2	0.9	1.7	8.3	0.0	2.4	2	0	0	2	2	2	0	Adenylylsulphate	kinase
Sigma54_activat	PF00158.21	gi|568164340|ref|YP_008947826.1|	-	0.11	11.9	0.1	0.77	9.2	0.0	2.2	2	0	0	2	2	2	0	Sigma-54	interaction	domain
AAA_14	PF13173.1	gi|568164340|ref|YP_008947826.1|	-	0.15	11.9	1.8	20	5.1	0.1	3.2	4	0	0	4	4	2	0	AAA	domain
AAA_13	PF13166.1	gi|568164340|ref|YP_008947826.1|	-	2.3	6.5	4.4	6	5.1	0.2	3.0	2	1	0	3	3	3	0	AAA	domain
Glycoprotein_B	PF00606.13	gi|568164341|ref|YP_008947827.1|	-	0.64	7.9	2.5	0.85	7.5	1.7	1.1	1	0	0	1	1	1	0	Herpesvirus	Glycoprotein	B
PMT_C	PF11647.3	gi|568164923|ref|YP_008947828.1|	-	0.02	14.4	0.4	0.027	14.0	0.3	1.3	1	0	0	1	1	1	0	C-terminal	region	of	Pasteurella	multocida	toxin	residues	569-1285
LEM	PF03020.10	gi|568164342|ref|YP_008947829.1|	-	0.0008	18.8	0.6	0.0036	16.7	0.0	2.2	2	2	0	2	2	2	1	LEM	domain
RHH_1	PF01402.16	gi|568164342|ref|YP_008947829.1|	-	0.011	15.6	1.6	0.83	9.6	0.0	2.6	2	1	1	3	3	3	0	Ribbon-helix-helix	protein,	copG	family
UvrB	PF12344.3	gi|568164342|ref|YP_008947829.1|	-	0.1	12.1	1.5	0.22	11.0	1.0	1.7	1	1	0	1	1	1	0	Ultra-violet	resistance	protein	B
GntR	PF00392.16	gi|568164342|ref|YP_008947829.1|	-	0.15	11.5	0.7	0.3	10.5	0.1	1.9	2	1	0	2	2	2	0	Bacterial	regulatory	proteins,	gntR	family
Pox_A_type_inc	PF04508.7	gi|568164342|ref|YP_008947829.1|	-	6.3	6.8	7.0	1.4	8.9	0.5	2.9	2	1	1	3	3	3	0	Viral	A-type	inclusion	protein	repeat
PIN	PF01850.16	gi|568164343|ref|YP_008947830.1|	-	0.00028	21.1	1.1	0.00049	20.4	0.8	1.5	1	1	0	1	1	1	1	PIN	domain
Dot_icm_IcmQ	PF09475.5	gi|568164343|ref|YP_008947830.1|	-	0.13	11.5	0.6	0.33	10.1	0.2	1.7	1	1	1	2	2	2	0	Dot/Icm	secretion	system	protein	(dot_icm_IcmQ)
CMD	PF02627.15	gi|568164344|ref|YP_008947831.1|	-	4e-24	84.2	0.0	5.1e-24	83.9	0.0	1.1	1	0	0	1	1	1	1	Carboxymuconolactone	decarboxylase	family
Glyco_hydro_15	PF00723.16	gi|568164346|ref|YP_008947833.1|	-	1.5e-42	145.6	0.1	1.4e-38	132.5	0.0	2.9	1	1	1	2	2	2	2	Glycosyl	hydrolases	family	15
TPR_19	PF14559.1	gi|568164346|ref|YP_008947833.1|	-	0.0023	18.2	0.0	0.007	16.6	0.0	1.8	2	0	0	2	2	2	1	Tetratricopeptide	repeat
DUF1237	PF06824.6	gi|568164346|ref|YP_008947833.1|	-	0.0027	16.3	0.0	0.045	12.3	0.0	2.4	1	1	2	3	3	3	1	Protein	of	unknown	function	(DUF1237)
TPR_4	PF07721.9	gi|568164346|ref|YP_008947833.1|	-	0.0063	16.8	0.1	0.038	14.4	0.0	2.3	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|568164346|ref|YP_008947833.1|	-	0.0069	16.2	0.8	0.04	13.8	0.1	2.5	3	0	0	3	3	3	1	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|568164346|ref|YP_008947833.1|	-	0.0075	16.8	0.1	0.04	14.5	0.0	2.1	2	0	0	2	2	2	1	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|568164346|ref|YP_008947833.1|	-	0.011	15.4	0.0	0.038	13.7	0.0	1.9	1	0	0	1	1	1	0	Tetratricopeptide	repeat
DUF608	PF04685.8	gi|568164346|ref|YP_008947833.1|	-	0.025	13.3	0.6	0.042	12.5	0.4	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF608
TPR_12	PF13424.1	gi|568164346|ref|YP_008947833.1|	-	0.034	14.0	0.0	0.089	12.7	0.0	1.6	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|568164346|ref|YP_008947833.1|	-	0.05	14.0	0.1	0.14	12.7	0.0	1.8	1	0	0	1	1	1	0	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|568164346|ref|YP_008947833.1|	-	0.16	12.0	0.0	0.42	10.7	0.0	1.7	1	1	0	1	1	1	0	Anaphase-promoting	complex,	cyclosome,	subunit	3
DUF3185	PF11381.3	gi|568164347|ref|YP_008947834.1|	-	0.0076	15.9	4.5	0.011	15.4	0.0	3.0	3	0	0	3	3	3	1	Protein	of	unknown	function	(DUF3185)
DUF1469	PF07332.6	gi|568164347|ref|YP_008947834.1|	-	0.064	12.9	0.1	0.064	12.9	0.1	3.0	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1469)
DUF1070	PF06376.7	gi|568164347|ref|YP_008947834.1|	-	0.52	10.2	3.9	0.31	10.9	0.8	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1070)
PHO4	PF01384.15	gi|568164347|ref|YP_008947834.1|	-	1.3	7.5	6.5	1.7	7.2	4.5	1.2	1	0	0	1	1	1	0	Phosphate	transporter	family
UPF0016	PF01169.14	gi|568164347|ref|YP_008947834.1|	-	1.8	8.7	15.3	2.1	8.5	2.5	2.4	2	0	0	2	2	2	0	Uncharacterized	protein	family	UPF0016
DUF3093	PF11292.3	gi|568164347|ref|YP_008947834.1|	-	1.8	8.3	4.5	3	7.6	0.5	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3093)
DUF4131	PF13567.1	gi|568164347|ref|YP_008947834.1|	-	3.9	6.8	11.4	6.8	6.0	0.1	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4131)
MFS_1	PF07690.11	gi|568164348|ref|YP_008947835.1|	-	4.1e-22	78.3	50.7	9.7e-13	47.5	17.1	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
FIST	PF08495.5	gi|568164348|ref|YP_008947835.1|	-	0.022	13.8	0.1	0.037	13.1	0.1	1.3	1	0	0	1	1	1	0	FIST	N	domain
PIG-F	PF06699.6	gi|568164348|ref|YP_008947835.1|	-	0.22	11.4	7.7	0.49	10.3	0.9	2.9	2	1	0	3	3	3	0	GPI	biosynthesis	protein	family	Pig-F
DUF3278	PF11683.3	gi|568164348|ref|YP_008947835.1|	-	5.5	7.0	10.3	4.1	7.4	0.7	3.4	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3278)
EamA	PF00892.15	gi|568164349|ref|YP_008947836.1|	-	9.8e-12	45.0	39.8	4.1e-09	36.5	11.4	2.8	1	1	1	2	2	2	2	EamA-like	transporter	family
Lig_chan	PF00060.21	gi|568164349|ref|YP_008947836.1|	-	5.2	6.7	5.4	28	4.4	3.7	2.4	1	1	0	1	1	1	0	Ligand-gated	ion	channel
Nramp	PF01566.13	gi|568164350|ref|YP_008947837.1|	-	2.3e-30	105.6	18.3	3e-30	105.2	12.7	1.1	1	0	0	1	1	1	1	Natural	resistance-associated	macrophage	protein
Ferritin	PF00210.19	gi|568164351|ref|YP_008947838.1|	-	3.1e-20	72.3	0.3	3.8e-20	72.0	0.2	1.1	1	0	0	1	1	1	1	Ferritin-like	domain
Rubrerythrin	PF02915.12	gi|568164351|ref|YP_008947838.1|	-	7.5e-05	23.0	0.1	9.6e-05	22.7	0.1	1.1	1	0	0	1	1	1	1	Rubrerythrin
DUF4439	PF14530.1	gi|568164351|ref|YP_008947838.1|	-	0.018	15.4	0.1	1.3	9.4	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4439)
Rieske	PF00355.21	gi|568164352|ref|YP_008947839.1|	-	2.9e-13	49.1	0.0	3.4e-13	48.9	0.0	1.1	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Rieske_2	PF13806.1	gi|568164352|ref|YP_008947839.1|	-	0.11	12.2	0.0	0.12	12.0	0.0	1.2	1	0	0	1	1	1	0	Rieske-like	[2Fe-2S]	domain
Thioredoxin	PF00085.15	gi|568164353|ref|YP_008947840.1|	-	7.9e-22	76.9	0.0	1.1e-21	76.4	0.0	1.1	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_2	PF13098.1	gi|568164353|ref|YP_008947840.1|	-	4.6e-06	26.7	0.0	0.0002	21.5	0.0	2.2	1	1	0	1	1	1	1	Thioredoxin-like	domain
Thioredoxin_8	PF13905.1	gi|568164353|ref|YP_008947840.1|	-	0.00014	21.9	0.0	0.002	18.1	0.0	2.3	1	1	1	2	2	2	1	Thioredoxin-like
Redoxin	PF08534.5	gi|568164353|ref|YP_008947840.1|	-	0.0011	18.5	0.0	0.0031	17.0	0.0	1.5	1	1	1	2	2	2	1	Redoxin
Thioredoxin_3	PF13192.1	gi|568164353|ref|YP_008947840.1|	-	0.0012	18.6	0.0	0.0021	17.8	0.0	1.4	1	1	0	1	1	1	1	Thioredoxin	domain
Thioredoxin_9	PF14595.1	gi|568164353|ref|YP_008947840.1|	-	0.0063	16.0	0.0	0.0076	15.8	0.0	1.2	1	0	0	1	1	1	1	Thioredoxin
AhpC-TSA	PF00578.16	gi|568164353|ref|YP_008947840.1|	-	0.017	14.7	0.0	0.15	11.7	0.0	2.0	1	1	1	2	2	2	0	AhpC/TSA	family
Endonuc_Holl	PF10107.4	gi|568164924|ref|YP_008947841.1|	-	1.8e-05	24.4	4.4	1.9e-05	24.4	3.0	1.0	1	0	0	1	1	1	1	Endonuclease	related	to	archaeal	Holliday	junction	resolvase
DUF1244	PF06844.6	gi|568164924|ref|YP_008947841.1|	-	0.019	14.7	2.6	0.019	14.7	1.8	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1244)
DUF1977	PF09320.6	gi|568164924|ref|YP_008947841.1|	-	0.19	12.0	1.3	0.19	11.9	0.9	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1977)
DUF761	PF05553.6	gi|568164924|ref|YP_008947841.1|	-	3.4	7.1	6.6	4.3	6.7	1.6	2.2	1	1	1	2	2	2	0	Cotton	fibre	expressed	protein
Endonuc_Holl	PF10107.4	gi|568164354|ref|YP_008947842.1|	-	2e-27	95.7	0.1	2.9e-27	95.2	0.1	1.2	1	0	0	1	1	1	1	Endonuclease	related	to	archaeal	Holliday	junction	resolvase
MbeB_N	PF04837.7	gi|568164354|ref|YP_008947842.1|	-	0.4	10.8	2.3	3.5	7.8	0.1	2.2	2	0	0	2	2	2	0	MbeB-like,	N-term	conserved	region
DUF4382	PF14321.1	gi|568164355|ref|YP_008947843.1|	-	3.6e-23	82.1	0.1	4.2e-23	81.9	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4382)
OppC_N	PF12911.2	gi|568164355|ref|YP_008947843.1|	-	0.12	11.8	1.0	0.26	10.6	0.7	1.6	1	0	0	1	1	1	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
DUF2648	PF10855.3	gi|568164355|ref|YP_008947843.1|	-	0.4	10.1	3.4	1.1	8.7	2.3	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2648)
Glycos_transf_1	PF00534.15	gi|568164357|ref|YP_008947846.1|	-	2.9e-23	82.1	0.0	4.6e-23	81.5	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|568164357|ref|YP_008947846.1|	-	2.1e-06	27.9	0.0	4.6e-06	26.8	0.0	1.6	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|568164357|ref|YP_008947846.1|	-	0.00016	21.9	0.0	0.00026	21.2	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
AA_permease_2	PF13520.1	gi|568164358|ref|YP_008947847.1|	-	1.2e-15	57.0	59.0	1.5e-15	56.6	40.9	1.1	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease	PF00324.16	gi|568164358|ref|YP_008947847.1|	-	2.6e-15	55.7	53.1	6e-15	54.5	36.8	1.6	1	1	0	1	1	1	1	Amino	acid	permease
DUF2250	PF10007.4	gi|568164359|ref|YP_008947848.1|	-	3.8e-05	23.4	0.2	0.00013	21.8	0.1	1.9	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Abhydrolase_6	PF12697.2	gi|568164360|ref|YP_008947849.1|	-	2e-23	83.4	0.0	3.4e-17	63.1	0.0	2.0	1	1	1	2	2	2	2	Alpha/beta	hydrolase	family
Abhydrolase_5	PF12695.2	gi|568164360|ref|YP_008947849.1|	-	5.9e-18	65.0	0.0	7e-18	64.7	0.0	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|568164360|ref|YP_008947849.1|	-	6.2e-10	39.0	0.1	4.9e-09	36.0	0.0	2.0	1	1	1	2	2	2	1	alpha/beta	hydrolase	fold
Hydrolase_4	PF12146.3	gi|568164360|ref|YP_008947849.1|	-	9.9e-05	22.1	0.0	0.00022	21.0	0.0	1.6	2	0	0	2	2	2	1	Putative	lysophospholipase
DUF1057	PF06342.7	gi|568164360|ref|YP_008947849.1|	-	0.0034	16.2	0.0	0.004	16.0	0.0	1.2	1	0	0	1	1	1	1	Alpha/beta	hydrolase	of	unknown	function	(DUF1057)
Ndr	PF03096.9	gi|568164360|ref|YP_008947849.1|	-	0.0034	15.9	0.0	0.0051	15.3	0.0	1.2	1	0	0	1	1	1	1	Ndr	family
Abhydrolase_2	PF02230.11	gi|568164360|ref|YP_008947849.1|	-	0.11	11.9	0.0	0.18	11.1	0.0	1.4	1	0	0	1	1	1	0	Phospholipase/Carboxylesterase
DUF3144	PF11342.3	gi|568164360|ref|YP_008947849.1|	-	0.15	12.1	0.0	0.29	11.2	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3144)
DUF2250	PF10007.4	gi|568164361|ref|YP_008947850.1|	-	1e-68	227.2	15.7	1.3e-37	127.6	2.9	2.0	2	0	0	2	2	2	2	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
DUF4393	PF14337.1	gi|568164361|ref|YP_008947850.1|	-	1.3e-06	28.0	0.5	0.023	14.1	0.1	2.2	1	1	1	2	2	2	2	Domain	of	unknown	function	(DUF4393)
DUF4423	PF14394.1	gi|568164361|ref|YP_008947850.1|	-	3e-05	23.6	0.7	0.00085	18.9	0.1	2.1	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4423)
Phage_rep_org_N	PF09681.5	gi|568164361|ref|YP_008947850.1|	-	0.0035	16.8	0.2	0.85	9.1	0.0	2.3	2	0	0	2	2	2	2	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
DUF2806	PF10987.3	gi|568164361|ref|YP_008947850.1|	-	0.014	14.8	0.3	1.1	8.6	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2806)
TrmB	PF01978.14	gi|568164361|ref|YP_008947850.1|	-	0.016	14.8	4.0	0.048	13.3	0.0	3.1	3	1	1	4	4	3	0	Sugar-specific	transcriptional	regulator	TrmB
FUR	PF01475.14	gi|568164361|ref|YP_008947850.1|	-	0.032	14.1	0.5	0.082	12.8	0.1	1.9	2	0	0	2	2	2	0	Ferric	uptake	regulator	family
HTH_27	PF13463.1	gi|568164361|ref|YP_008947850.1|	-	0.25	11.6	6.5	1.3	9.4	0.2	3.7	4	1	0	4	4	4	0	Winged	helix	DNA-binding	domain
PadR	PF03551.9	gi|568164361|ref|YP_008947850.1|	-	0.29	10.9	8.3	6.1	6.6	0.8	4.2	2	2	1	3	3	3	0	Transcriptional	regulator	PadR-like	family
HTH_45	PF14947.1	gi|568164361|ref|YP_008947850.1|	-	0.35	10.7	8.5	1.2	8.9	0.2	3.9	3	1	0	3	3	3	0	Winged	helix-turn-helix
RPEL	PF02755.10	gi|568164361|ref|YP_008947850.1|	-	0.48	9.8	4.0	8.1	5.9	0.3	2.9	2	0	0	2	2	2	0	RPEL	repeat
CxxCxxCC	PF03692.10	gi|568164362|ref|YP_008947851.1|	-	8.4e-07	29.3	0.4	1.4e-06	28.6	0.3	1.3	1	0	0	1	1	1	1	Putative	zinc-	or	iron-chelating	domain
Sigma70_r3	PF04539.11	gi|568164362|ref|YP_008947851.1|	-	0.03	14.2	0.1	0.057	13.3	0.1	1.4	1	0	0	1	1	1	0	Sigma-70	region	3
DrsE	PF02635.10	gi|568164364|ref|YP_008947853.1|	-	0.12	12.4	0.0	0.17	11.9	0.0	1.2	1	0	0	1	1	1	0	DsrE/DsrF-like	family
MFS_1	PF07690.11	gi|568164365|ref|YP_008947854.1|	-	5.6e-29	100.9	57.1	2.6e-16	59.3	18.9	2.8	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|568164365|ref|YP_008947854.1|	-	4.6e-28	98.0	41.6	1.3e-25	89.9	28.8	2.0	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_2	PF13347.1	gi|568164365|ref|YP_008947854.1|	-	4.9e-10	38.3	12.3	4.9e-10	38.3	8.5	3.0	2	1	1	3	3	3	2	MFS/sugar	transport	protein
MFS_1_like	PF12832.2	gi|568164365|ref|YP_008947854.1|	-	0.007	16.1	0.2	0.007	16.1	0.1	4.5	3	2	1	4	4	4	1	MFS_1	like	family
Amidohydro_1	PF01979.15	gi|568164366|ref|YP_008947855.1|	-	4.7e-51	174.4	0.1	5.6e-51	174.1	0.1	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|568164366|ref|YP_008947855.1|	-	1.3e-13	50.5	0.1	6.1e-13	48.3	0.0	2.2	2	0	0	2	2	2	1	Amidohydrolase
Amidohydro_4	PF13147.1	gi|568164366|ref|YP_008947855.1|	-	1.8e-13	51.1	0.0	3.5e-11	43.6	0.0	2.3	1	1	0	1	1	1	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|568164366|ref|YP_008947855.1|	-	9.5e-12	44.8	0.3	1.3e-07	31.1	0.0	2.2	2	0	0	2	2	2	2	Amidohydrolase	family
AP_endonuc_2	PF01261.19	gi|568164366|ref|YP_008947855.1|	-	0.079	12.2	0.0	0.57	9.4	0.0	2.2	2	0	0	2	2	2	0	Xylose	isomerase-like	TIM	barrel
Aminotran_1_2	PF00155.16	gi|568164367|ref|YP_008947856.1|	-	6.4e-54	183.2	0.0	8.7e-54	182.8	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.14	gi|568164367|ref|YP_008947856.1|	-	4.7e-10	38.7	0.0	7e-10	38.1	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.16	gi|568164367|ref|YP_008947856.1|	-	1.8e-06	27.2	0.0	3.4e-06	26.4	0.0	1.3	1	0	0	1	1	1	1	Beta-eliminating	lyase
Cys_Met_Meta_PP	PF01053.15	gi|568164367|ref|YP_008947856.1|	-	5.3e-06	24.9	0.0	7.2e-06	24.5	0.0	1.2	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
Alliinase_C	PF04864.8	gi|568164367|ref|YP_008947856.1|	-	9.7e-06	24.4	0.1	1.3e-05	24.0	0.1	1.2	1	0	0	1	1	1	1	Allinase
DegT_DnrJ_EryC1	PF01041.12	gi|568164367|ref|YP_008947856.1|	-	0.0075	15.3	0.0	0.013	14.5	0.0	1.3	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
PhdYeFM_antitox	PF02604.14	gi|568164367|ref|YP_008947856.1|	-	0.084	12.4	0.4	0.49	10.0	0.1	2.3	2	0	0	2	2	2	0	Antitoxin	Phd_YefM,	type	II	toxin-antitoxin	system
OKR_DC_1	PF01276.15	gi|568164367|ref|YP_008947856.1|	-	0.12	10.9	0.0	0.16	10.4	0.0	1.3	1	0	0	1	1	1	0	Orn/Lys/Arg	decarboxylase,	major	domain
Ald_Xan_dh_C2	PF02738.13	gi|568164927|ref|YP_008947858.1|	-	1.4e-22	79.7	4.9	1.1e-15	57.0	0.1	2.0	1	1	1	2	2	2	2	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|568164928|ref|YP_008947859.1|	-	5.5e-10	39.3	0.0	8.9e-10	38.6	0.0	1.3	1	1	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
CitMHS	PF03600.11	gi|568164368|ref|YP_008947860.1|	-	1.2e-26	93.1	0.7	5.6e-24	84.3	0.0	2.1	1	1	1	2	2	2	2	Citrate	transporter
Na_sulph_symp	PF00939.14	gi|568164368|ref|YP_008947860.1|	-	1.9e-14	53.3	36.4	1.5e-10	40.5	9.5	2.4	2	1	0	2	2	2	2	Sodium:sulfate	symporter	transmembrane	region
TrkA_C	PF02080.16	gi|568164368|ref|YP_008947860.1|	-	2.1e-12	46.4	1.1	2.2e-08	33.5	0.0	3.1	3	0	0	3	3	3	2	TrkA-C	domain
NicO	PF03824.11	gi|568164369|ref|YP_008947861.1|	-	0.004	16.5	4.7	0.004	16.5	3.3	2.3	1	1	1	2	2	2	1	High-affinity	nickel-transport	protein
DsbD_2	PF13386.1	gi|568164369|ref|YP_008947861.1|	-	0.012	15.3	8.2	0.014	15.1	5.7	1.2	1	0	0	1	1	1	0	Cytochrome	C	biogenesis	protein	transmembrane	region
SH3_4	PF06347.8	gi|568164929|ref|YP_008947862.1|	-	0.016	14.7	0.1	0.028	13.9	0.1	1.4	1	0	0	1	1	1	0	Bacterial	SH3	domain
ABC_tran	PF00005.22	gi|568164931|ref|YP_008947864.1|	-	5.6e-23	81.7	0.0	9.6e-23	80.9	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|568164931|ref|YP_008947864.1|	-	4.2e-17	63.0	5.1	1.1e-08	35.3	0.7	2.7	2	1	1	3	3	3	2	AAA	domain
SMC_N	PF02463.14	gi|568164931|ref|YP_008947864.1|	-	8.3e-08	31.7	0.8	0.0035	16.5	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|568164931|ref|YP_008947864.1|	-	1.1e-07	31.2	0.2	0.00029	19.9	0.0	2.2	1	1	1	2	2	2	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|568164931|ref|YP_008947864.1|	-	2.6e-07	31.1	1.4	6e-07	29.9	0.9	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|568164931|ref|YP_008947864.1|	-	4.1e-06	26.2	0.0	1.1e-05	24.9	0.0	1.6	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_17	PF13207.1	gi|568164931|ref|YP_008947864.1|	-	9.1e-05	23.2	1.8	0.00081	20.2	0.5	2.9	2	1	0	2	2	2	1	AAA	domain
AAA_14	PF13173.1	gi|568164931|ref|YP_008947864.1|	-	0.00047	20.0	0.5	0.012	15.4	0.1	2.8	2	1	0	2	2	2	1	AAA	domain
AAA_10	PF12846.2	gi|568164931|ref|YP_008947864.1|	-	0.0022	17.5	1.0	0.19	11.0	0.1	2.3	1	1	1	2	2	2	1	AAA-like	domain
DUF258	PF03193.11	gi|568164931|ref|YP_008947864.1|	-	0.0033	16.6	0.0	0.0066	15.6	0.0	1.6	2	0	0	2	2	2	1	Protein	of	unknown	function,	DUF258
AAA_25	PF13481.1	gi|568164931|ref|YP_008947864.1|	-	0.0045	16.3	0.0	0.0068	15.8	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|568164931|ref|YP_008947864.1|	-	0.0052	16.5	0.4	0.02	14.6	0.2	1.9	1	1	0	1	1	1	1	Archaeal	ATPase
MobB	PF03205.9	gi|568164931|ref|YP_008947864.1|	-	0.0074	15.9	0.0	0.018	14.7	0.0	1.7	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_22	PF13401.1	gi|568164931|ref|YP_008947864.1|	-	0.011	15.8	0.0	0.023	14.8	0.0	1.8	1	1	0	1	1	1	0	AAA	domain
AAA_16	PF13191.1	gi|568164931|ref|YP_008947864.1|	-	0.021	14.8	0.0	0.044	13.7	0.0	1.5	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_18	PF13238.1	gi|568164931|ref|YP_008947864.1|	-	0.028	14.7	1.4	0.055	13.7	0.3	2.2	2	1	0	2	2	1	0	AAA	domain
Miro	PF08477.8	gi|568164931|ref|YP_008947864.1|	-	0.053	14.0	0.0	0.12	12.9	0.0	1.7	1	0	0	1	1	1	0	Miro-like	protein
NACHT	PF05729.7	gi|568164931|ref|YP_008947864.1|	-	0.067	12.8	0.0	0.12	11.9	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
AAA_33	PF13671.1	gi|568164931|ref|YP_008947864.1|	-	0.071	12.9	0.0	0.15	11.8	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
NTPase_1	PF03266.10	gi|568164931|ref|YP_008947864.1|	-	0.095	12.4	1.9	3.8	7.2	0.0	3.3	1	1	2	3	3	3	0	NTPase
AAA_28	PF13521.1	gi|568164931|ref|YP_008947864.1|	-	0.14	12.1	0.0	0.35	10.8	0.0	1.7	2	0	0	2	2	1	0	AAA	domain
AAA_13	PF13166.1	gi|568164931|ref|YP_008947864.1|	-	0.21	9.9	0.9	1	7.7	0.0	2.2	1	1	2	3	3	3	0	AAA	domain
Na_H_Exchanger	PF00999.16	gi|568164370|ref|YP_008947866.1|	-	1.2e-34	119.4	47.5	1.6e-34	119.0	33.0	1.1	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
CBS	PF00571.23	gi|568164370|ref|YP_008947866.1|	-	1.2e-18	66.6	2.7	2.1e-09	37.0	0.3	2.7	2	0	0	2	2	2	2	CBS	domain
HGTP_anticodon	PF03129.15	gi|568164370|ref|YP_008947866.1|	-	0.099	12.5	1.5	6.7	6.7	0.1	2.4	1	1	0	2	2	2	0	Anticodon	binding	domain
DUF1626	PF07788.6	gi|568164371|ref|YP_008947867.1|	-	2.8e-27	94.2	5.5	2.8e-27	94.2	3.8	1.8	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1626)
DUF3782	PF12644.2	gi|568164371|ref|YP_008947867.1|	-	1e-24	86.0	0.7	1.1e-23	82.7	0.5	2.2	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF3782)
DUF4143	PF13635.1	gi|568164371|ref|YP_008947867.1|	-	0.049	13.8	0.1	0.099	12.8	0.1	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4143)
Thermopsin	PF05317.6	gi|568164373|ref|YP_008947869.1|	-	2.6e-72	242.9	24.4	2.6e-72	242.9	16.9	5.1	3	1	0	4	4	4	1	Thermopsin
GATase_6	PF13522.1	gi|568164374|ref|YP_008947870.1|	-	7.8e-10	38.8	0.0	1.2e-09	38.1	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_4	PF13230.1	gi|568164374|ref|YP_008947870.1|	-	4.4e-07	28.8	0.0	5.7e-07	28.4	0.0	1.1	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
DUF4384	PF14326.1	gi|568164374|ref|YP_008947870.1|	-	0.038	13.8	0.1	0.082	12.7	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4384)
MFS_1	PF07690.11	gi|568164375|ref|YP_008947871.1|	-	4.2e-24	84.9	46.5	4.2e-24	84.9	32.2	2.0	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|568164375|ref|YP_008947871.1|	-	2.8e-20	72.3	40.7	1.1e-16	60.4	11.2	2.2	2	0	0	2	2	2	2	Sugar	(and	other)	transporter
Glyco_hydro_1	PF00232.13	gi|568164376|ref|YP_008947872.1|	-	1.3e-62	211.5	7.0	1.2e-55	188.5	2.0	2.7	2	1	0	2	2	2	2	Glycosyl	hydrolase	family	1
Cellulase	PF00150.13	gi|568164376|ref|YP_008947872.1|	-	7.7e-05	22.0	0.4	0.00017	20.9	0.3	1.5	1	1	0	1	1	1	1	Cellulase	(glycosyl	hydrolase	family	5)
Peptidase_M3_N	PF08439.5	gi|568164376|ref|YP_008947872.1|	-	0.13	12.2	0.0	1.5	8.9	0.1	2.3	2	0	0	2	2	2	0	Oligopeptidase	F
IncA	PF04156.9	gi|568164933|ref|YP_008947873.1|	-	0.16	11.5	2.4	0.19	11.2	1.7	1.1	1	0	0	1	1	1	0	IncA	protein
DUF2207	PF09972.4	gi|568164933|ref|YP_008947873.1|	-	0.2	10.2	1.7	0.22	10.0	1.2	1.0	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
ABC2_membrane_2	PF12679.2	gi|568164933|ref|YP_008947873.1|	-	5	5.8	6.8	6.1	5.6	4.7	1.1	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
UXS1_N	PF11803.3	gi|568164935|ref|YP_008947875.1|	-	0.097	12.4	0.0	0.11	12.2	0.0	1.1	1	0	0	1	1	1	0	UDP-glucuronate	decarboxylase	N-terminal
GntR	PF00392.16	gi|568164377|ref|YP_008947876.1|	-	1.2e-17	63.0	0.0	2e-17	62.3	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
HTH_Crp_2	PF13545.1	gi|568164377|ref|YP_008947876.1|	-	6e-06	25.9	0.0	9.4e-06	25.3	0.0	1.4	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
HTH_41	PF14502.1	gi|568164377|ref|YP_008947876.1|	-	1.7e-05	24.3	0.0	7.9e-05	22.1	0.0	1.9	2	0	0	2	2	2	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|568164377|ref|YP_008947876.1|	-	0.0027	17.3	0.2	0.0079	15.8	0.1	1.8	1	1	1	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_17	PF12728.2	gi|568164377|ref|YP_008947876.1|	-	0.0099	16.1	0.1	0.13	12.5	0.0	2.2	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|568164377|ref|YP_008947876.1|	-	0.014	14.7	0.0	0.044	13.1	0.0	1.8	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
HTH_36	PF13730.1	gi|568164377|ref|YP_008947876.1|	-	0.021	14.9	0.0	0.048	13.7	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
RPA_C	PF08784.6	gi|568164377|ref|YP_008947876.1|	-	0.042	14.2	0.0	0.086	13.2	0.0	1.5	2	0	0	2	2	2	0	Replication	protein	A	C	terminal
Fe_dep_repress	PF01325.14	gi|568164377|ref|YP_008947876.1|	-	0.072	13.0	0.1	0.22	11.4	0.0	1.8	2	0	0	2	2	2	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
Rrf2	PF02082.15	gi|568164377|ref|YP_008947876.1|	-	0.096	12.8	0.0	0.17	12.0	0.0	1.5	1	0	0	1	1	1	0	Transcriptional	regulator
SWIRM	PF04433.12	gi|568164377|ref|YP_008947876.1|	-	0.11	12.6	0.0	0.2	11.7	0.0	1.5	1	0	0	1	1	1	0	SWIRM	domain
Sugar_tr	PF00083.19	gi|568164378|ref|YP_008947877.1|	-	6.6e-26	90.8	44.5	1.2e-20	73.5	10.6	2.0	1	1	1	2	2	2	2	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|568164378|ref|YP_008947877.1|	-	1.8e-24	86.1	53.4	1.8e-24	86.1	37.0	2.0	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
Glyco_hydro_12	PF01670.11	gi|568164379|ref|YP_008947878.1|	-	3.5e-15	56.1	0.9	1.1e-14	54.4	0.7	1.7	1	1	0	1	1	1	1	Glycosyl	hydrolase	family	12
Kinesin-relat_1	PF12711.2	gi|568164936|ref|YP_008947879.1|	-	0.014	15.7	0.5	0.018	15.4	0.3	1.1	1	0	0	1	1	1	0	Kinesin	motor
HIGH_NTase1	PF05636.6	gi|568164936|ref|YP_008947879.1|	-	0.049	12.6	0.0	0.053	12.5	0.0	1.0	1	0	0	1	1	1	0	HIGH	Nucleotidyl	Transferase
Phage_capsid	PF05065.8	gi|568164936|ref|YP_008947879.1|	-	0.075	12.2	0.0	0.075	12.2	0.0	1.0	1	0	0	1	1	1	0	Phage	capsid	family
UPF0066	PF01980.11	gi|568164380|ref|YP_008947880.1|	-	8e-37	125.8	0.1	1e-36	125.5	0.0	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0066
MMS22L_C	PF14911.1	gi|568164937|ref|YP_008947881.1|	-	0.033	13.2	0.1	0.033	13.2	0.1	1.0	1	0	0	1	1	1	0	S-phase	genomic	integrity	recombination	mediator,	C-terminal
FAD_binding_4	PF01565.18	gi|568164381|ref|YP_008947884.1|	-	8.6e-26	90.0	0.0	1.6e-25	89.1	0.0	1.4	1	0	0	1	1	1	1	FAD	binding	domain
FAD-oxidase_C	PF02913.14	gi|568164381|ref|YP_008947884.1|	-	4.6e-06	26.1	0.0	1.3e-05	24.6	0.0	1.7	2	0	0	2	2	2	1	FAD	linked	oxidases,	C-terminal	domain
DUF1177	PF06675.6	gi|568164382|ref|YP_008947885.1|	-	1.4e-109	364.9	0.0	1.7e-109	364.6	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1177)
Cas_DxTHG	PF09455.5	gi|568164940|ref|YP_008947886.1|	-	3.6e-11	42.8	0.0	3.8e-11	42.7	0.0	1.0	1	0	0	1	1	1	1	CRISPR-associated	(Cas)	DxTHG	family
DUF4459	PF14673.1	gi|568164940|ref|YP_008947886.1|	-	0.061	13.0	0.0	0.07	12.8	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4459)
Reo_sigmaC	PF04582.7	gi|568164383|ref|YP_008947889.1|	-	2.4e-06	26.9	0.3	3.2e-06	26.5	0.2	1.1	1	0	0	1	1	1	1	Reovirus	sigma	C	capsid	protein
Atg14	PF10186.4	gi|568164383|ref|YP_008947889.1|	-	4.2e-05	22.6	5.9	5.8e-05	22.1	4.1	1.2	1	0	0	1	1	1	1	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
MCPsignal	PF00015.16	gi|568164383|ref|YP_008947889.1|	-	5.5e-05	22.8	3.1	8.6e-05	22.1	2.1	1.4	1	0	0	1	1	1	1	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
DUF4116	PF13475.1	gi|568164383|ref|YP_008947889.1|	-	7.4e-05	22.1	0.8	0.00048	19.5	0.1	2.7	2	1	0	2	2	1	1	Domain	of	unknown	function	(DUF4116)
TMF_DNA_bd	PF12329.3	gi|568164383|ref|YP_008947889.1|	-	0.00024	20.8	13.0	0.001	18.8	5.0	2.8	1	1	1	2	2	2	1	TATA	element	modulatory	factor	1	DNA	binding
DUF2570	PF10828.3	gi|568164383|ref|YP_008947889.1|	-	0.00039	20.0	7.8	0.00082	18.9	5.4	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2570)
DASH_Duo1	PF08651.5	gi|568164383|ref|YP_008947889.1|	-	0.00042	19.8	5.9	0.033	13.7	0.4	2.4	1	1	1	2	2	2	2	DASH	complex	subunit	Duo1
AAA_13	PF13166.1	gi|568164383|ref|YP_008947889.1|	-	0.0012	17.3	4.8	0.0018	16.8	3.3	1.2	1	0	0	1	1	1	1	AAA	domain
Tropomyosin	PF00261.15	gi|568164383|ref|YP_008947889.1|	-	0.0013	17.9	5.2	0.0024	17.0	3.6	1.4	1	0	0	1	1	1	1	Tropomyosin
TPR_MLP1_2	PF07926.7	gi|568164383|ref|YP_008947889.1|	-	0.0013	18.4	6.0	0.0022	17.7	4.1	1.4	1	0	0	1	1	1	1	TPR/MLP1/MLP2-like	protein
IncA	PF04156.9	gi|568164383|ref|YP_008947889.1|	-	0.0024	17.5	7.9	0.0038	16.8	5.5	1.4	1	0	0	1	1	1	1	IncA	protein
Bacillus_HBL	PF05791.6	gi|568164383|ref|YP_008947889.1|	-	0.0024	17.2	5.3	0.0042	16.4	3.6	1.4	1	0	0	1	1	1	1	Bacillus	haemolytic	enterotoxin	(HBL)
DUF16	PF01519.11	gi|568164383|ref|YP_008947889.1|	-	0.0024	18.0	12.6	0.13	12.4	1.5	2.7	1	1	1	2	2	2	2	Protein	of	unknown	function	DUF16
FliJ	PF02050.11	gi|568164383|ref|YP_008947889.1|	-	0.0024	17.9	8.6	0.061	13.3	1.3	2.3	1	1	1	2	2	2	1	Flagellar	FliJ	protein
ALMT	PF11744.3	gi|568164383|ref|YP_008947889.1|	-	0.0031	16.2	4.6	0.0061	15.2	2.9	1.6	1	1	1	2	2	2	1	Aluminium	activated	malate	transporter
DUF1664	PF07889.7	gi|568164383|ref|YP_008947889.1|	-	0.0033	17.2	6.5	0.062	13.0	1.9	2.4	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF1664)
NPV_P10	PF05531.7	gi|568164383|ref|YP_008947889.1|	-	0.0038	17.4	6.0	0.18	12.1	0.5	3.0	1	1	1	2	2	2	1	Nucleopolyhedrovirus	P10	protein
Arfaptin	PF06456.8	gi|568164383|ref|YP_008947889.1|	-	0.0044	16.3	3.0	0.0059	15.9	2.1	1.2	1	0	0	1	1	1	1	Arfaptin-like	domain
ATG16	PF08614.6	gi|568164383|ref|YP_008947889.1|	-	0.0044	16.8	8.4	0.01	15.7	5.8	1.5	1	1	0	1	1	1	1	Autophagy	protein	16	(ATG16)
Herpes_U30	PF04523.8	gi|568164383|ref|YP_008947889.1|	-	0.011	13.2	0.5	0.013	12.9	0.3	1.1	1	0	0	1	1	1	0	Herpes	virus	tegument	protein	U30
FCH	PF00611.18	gi|568164383|ref|YP_008947889.1|	-	0.011	15.8	3.6	0.02	15.0	2.5	1.4	1	0	0	1	1	1	0	Fes/CIP4,	and	EFC/F-BAR	homology	domain
Lebercilin	PF15619.1	gi|568164383|ref|YP_008947889.1|	-	0.012	15.0	5.3	0.02	14.3	3.7	1.4	1	0	0	1	1	1	0	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
Fib_alpha	PF08702.5	gi|568164383|ref|YP_008947889.1|	-	0.013	15.6	8.3	0.16	12.0	5.3	2.3	1	1	1	2	2	2	0	Fibrinogen	alpha/beta	chain	family
GAS	PF13851.1	gi|568164383|ref|YP_008947889.1|	-	0.014	14.6	6.8	0.025	13.7	4.7	1.4	1	0	0	1	1	1	0	Growth-arrest	specific	micro-tubule	binding
DUF812	PF05667.6	gi|568164383|ref|YP_008947889.1|	-	0.015	13.8	6.8	0.021	13.3	4.7	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF812)
FlgN	PF05130.7	gi|568164383|ref|YP_008947889.1|	-	0.017	15.3	6.0	0.027	14.6	4.2	1.3	1	0	0	1	1	1	0	FlgN	protein
DUF2216	PF10226.4	gi|568164383|ref|YP_008947889.1|	-	0.02	14.4	1.5	0.02	14.4	1.0	1.7	1	1	0	1	1	1	0	Uncharacterized	conserved	proteins	(DUF2216)
Serine_rich	PF08824.5	gi|568164383|ref|YP_008947889.1|	-	0.02	14.6	1.5	0.096	12.3	0.5	2.1	1	1	0	1	1	1	0	Serine	rich	protein	interaction	domain
SlyX	PF04102.7	gi|568164383|ref|YP_008947889.1|	-	0.022	15.1	6.5	0.16	12.3	1.0	2.5	1	1	1	2	2	2	0	SlyX
Prominin	PF05478.6	gi|568164383|ref|YP_008947889.1|	-	0.023	12.2	3.2	0.031	11.8	2.2	1.2	1	0	0	1	1	1	0	Prominin
ADIP	PF11559.3	gi|568164383|ref|YP_008947889.1|	-	0.024	14.5	8.0	0.041	13.7	5.5	1.4	1	0	0	1	1	1	0	Afadin-	and	alpha	-actinin-Binding
Spc7	PF08317.6	gi|568164383|ref|YP_008947889.1|	-	0.025	13.2	8.3	0.034	12.8	5.7	1.2	1	0	0	1	1	1	0	Spc7	kinetochore	protein
SNARE	PF05739.14	gi|568164383|ref|YP_008947889.1|	-	0.025	14.2	7.6	1.4	8.6	0.1	3.0	2	1	0	2	2	2	0	SNARE	domain
DUF948	PF06103.6	gi|568164383|ref|YP_008947889.1|	-	0.03	14.1	5.1	0.092	12.6	2.6	2.3	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
LXG	PF04740.7	gi|568164383|ref|YP_008947889.1|	-	0.031	14.0	4.4	0.048	13.4	3.0	1.4	1	0	0	1	1	1	0	LXG	domain	of	WXG	superfamily
COG5	PF10392.4	gi|568164383|ref|YP_008947889.1|	-	0.032	14.1	5.1	0.19	11.6	1.6	2.6	1	1	1	2	2	2	0	Golgi	transport	complex	subunit	5
Vps51	PF08700.6	gi|568164383|ref|YP_008947889.1|	-	0.034	13.9	4.5	0.55	10.1	2.0	2.5	1	1	1	2	2	2	0	Vps51/Vps67
Filament	PF00038.16	gi|568164383|ref|YP_008947889.1|	-	0.039	13.4	6.3	0.057	12.8	4.3	1.2	1	0	0	1	1	1	0	Intermediate	filament	protein
Prefoldin	PF02996.12	gi|568164383|ref|YP_008947889.1|	-	0.042	13.4	5.2	0.51	9.9	0.8	2.4	1	1	1	2	2	2	0	Prefoldin	subunit
DUF2450	PF10475.4	gi|568164383|ref|YP_008947889.1|	-	0.043	12.7	4.2	0.068	12.0	2.9	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	N-terminal	domain	(DUF2450)
IFT57	PF10498.4	gi|568164383|ref|YP_008947889.1|	-	0.053	12.2	6.8	0.076	11.7	4.7	1.2	1	0	0	1	1	1	0	Intra-flagellar	transport	protein	57
V_ATPase_I	PF01496.14	gi|568164383|ref|YP_008947889.1|	-	0.066	11.0	4.3	0.075	10.8	3.0	1.2	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
Tektin	PF03148.9	gi|568164383|ref|YP_008947889.1|	-	0.072	11.6	6.9	0.72	8.3	0.5	2.2	1	1	1	2	2	2	0	Tektin	family
Peptidase_S46	PF10459.4	gi|568164383|ref|YP_008947889.1|	-	0.093	11.1	1.1	0.11	10.8	0.8	1.1	1	0	0	1	1	1	0	Peptidase	S46
Mnd1	PF03962.10	gi|568164383|ref|YP_008947889.1|	-	0.11	12.1	4.4	0.19	11.3	3.1	1.6	1	0	0	1	1	1	0	Mnd1	family
Tweety	PF04906.8	gi|568164383|ref|YP_008947889.1|	-	0.12	10.7	1.7	0.17	10.2	1.2	1.2	1	0	0	1	1	1	0	Tweety
Seryl_tRNA_N	PF02403.17	gi|568164383|ref|YP_008947889.1|	-	0.14	12.2	9.3	0.47	10.4	6.2	2.0	1	1	0	1	1	1	0	Seryl-tRNA	synthetase	N-terminal	domain
Fmp27_WPPW	PF10359.4	gi|568164383|ref|YP_008947889.1|	-	0.14	10.5	4.1	0.19	10.1	2.8	1.1	1	0	0	1	1	1	0	RNA	pol	II	promoter	Fmp27	protein	domain
AATF-Che1	PF13339.1	gi|568164383|ref|YP_008947889.1|	-	0.14	12.2	2.6	0.61	10.2	0.5	2.1	1	1	1	2	2	2	0	Apoptosis	antagonizing	transcription	factor
Retrotrans_gag	PF03732.12	gi|568164383|ref|YP_008947889.1|	-	0.15	12.1	0.4	3.2	7.8	0.3	2.3	1	1	0	1	1	1	0	Retrotransposon	gag	protein
DUF4279	PF14106.1	gi|568164383|ref|YP_008947889.1|	-	0.16	11.8	0.6	5	7.0	0.1	2.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4279)
IL6	PF00489.12	gi|568164383|ref|YP_008947889.1|	-	0.16	11.5	1.8	10	5.6	0.2	2.3	1	1	1	2	2	2	0	Interleukin-6/G-CSF/MGF	family
FliD_N	PF02465.13	gi|568164383|ref|YP_008947889.1|	-	0.18	12.1	3.9	0.4	11.0	1.1	2.2	1	1	1	2	2	2	0	Flagellar	hook-associated	protein	2	N-terminus
TMPIT	PF07851.8	gi|568164383|ref|YP_008947889.1|	-	0.19	10.7	3.8	0.29	10.1	2.7	1.3	1	0	0	1	1	1	0	TMPIT-like	protein
Clusterin	PF01093.12	gi|568164383|ref|YP_008947889.1|	-	0.2	10.4	3.2	0.45	9.2	1.2	2.0	2	0	0	2	2	2	0	Clusterin
Spectrin	PF00435.16	gi|568164383|ref|YP_008947889.1|	-	0.22	11.8	7.1	2	8.7	4.3	2.1	1	1	1	2	2	2	0	Spectrin	repeat
CENP-Q	PF13094.1	gi|568164383|ref|YP_008947889.1|	-	0.23	11.4	7.8	0.69	9.9	5.5	1.7	1	1	1	2	2	2	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
CorA	PF01544.13	gi|568164383|ref|YP_008947889.1|	-	0.26	10.3	4.4	0.11	11.4	1.6	1.5	2	0	0	2	2	1	0	CorA-like	Mg2+	transporter	protein
DUF2312	PF10073.4	gi|568164383|ref|YP_008947889.1|	-	0.26	10.6	5.8	9.5	5.6	0.5	3.5	2	1	1	3	3	3	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2312)
DUF3972	PF13118.1	gi|568164383|ref|YP_008947889.1|	-	0.32	11.0	6.5	1.5	8.9	4.5	2.2	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3972)
Tex_N	PF09371.5	gi|568164383|ref|YP_008947889.1|	-	0.34	10.1	6.8	3.7	6.8	0.5	2.3	1	1	1	2	2	2	0	Tex-like	protein	N-terminal	domain
BLOC1_2	PF10046.4	gi|568164383|ref|YP_008947889.1|	-	0.34	11.0	8.1	2.2	8.4	1.9	2.4	1	1	1	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Syntaxin	PF00804.20	gi|568164383|ref|YP_008947889.1|	-	0.52	10.4	9.5	1.5	9.0	6.4	2.0	1	1	0	1	1	1	0	Syntaxin
DUF1319	PF07028.6	gi|568164383|ref|YP_008947889.1|	-	0.53	10.4	9.1	34	4.6	5.2	3.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1319)
XhlA	PF10779.4	gi|568164383|ref|YP_008947889.1|	-	0.56	10.1	7.1	4.5	7.2	0.2	2.6	1	1	1	2	2	2	0	Haemolysin	XhlA
DUF4140	PF13600.1	gi|568164383|ref|YP_008947889.1|	-	0.57	10.6	5.0	12	6.3	0.6	2.3	1	1	1	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
COG2	PF06148.6	gi|568164383|ref|YP_008947889.1|	-	0.57	10.0	5.3	9.8	6.0	0.5	2.3	1	1	1	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
Med9	PF07544.8	gi|568164383|ref|YP_008947889.1|	-	0.58	9.9	8.5	5.2	6.8	2.4	2.6	1	1	1	2	2	2	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
Corona_S2	PF01601.11	gi|568164383|ref|YP_008947889.1|	-	0.63	8.0	4.0	1	7.3	0.7	2.0	1	1	2	3	3	3	0	Coronavirus	S2	glycoprotein
Cauli_AT	PF03233.8	gi|568164383|ref|YP_008947889.1|	-	0.7	9.5	8.9	11	5.7	6.2	2.4	1	1	0	1	1	1	0	Aphid	transmission	protein
Phage_GP20	PF06810.6	gi|568164383|ref|YP_008947889.1|	-	0.86	9.0	9.6	1.8	8.0	2.6	2.6	1	1	1	2	2	2	0	Phage	minor	structural	protein	GP20
zf-C4H2	PF10146.4	gi|568164383|ref|YP_008947889.1|	-	0.87	9.5	7.4	1.1	9.2	4.2	1.8	1	1	1	2	2	2	0	Zinc	finger-containing	protein
DUF2076	PF09849.4	gi|568164383|ref|YP_008947889.1|	-	0.92	9.5	5.1	5.9	6.8	3.5	2.0	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2076)
TBPIP	PF07106.8	gi|568164383|ref|YP_008947889.1|	-	1	8.8	11.2	0.29	10.6	4.7	2.2	2	1	0	2	2	2	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
NERD	PF08378.6	gi|568164383|ref|YP_008947889.1|	-	1.1	9.5	4.7	0.91	9.8	0.1	2.5	2	1	0	2	2	2	0	Nuclease-related	domain
Laminin_II	PF06009.7	gi|568164383|ref|YP_008947889.1|	-	1.2	8.9	9.6	0.36	10.5	4.2	1.9	2	1	0	2	2	1	0	Laminin	Domain	II
TMF_TATA_bd	PF12325.3	gi|568164383|ref|YP_008947889.1|	-	1.2	8.8	9.8	9	6.0	0.3	2.5	1	1	1	2	2	2	0	TATA	element	modulatory	factor	1	TATA	binding
Lge1	PF11488.3	gi|568164383|ref|YP_008947889.1|	-	1.8	8.8	4.6	7.7	6.7	1.2	2.5	1	1	1	2	2	2	0	Transcriptional	regulatory	protein	LGE1
DUF4559	PF15112.1	gi|568164383|ref|YP_008947889.1|	-	2	7.4	5.7	3.6	6.6	1.9	1.8	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4559)
DUF2203	PF09969.4	gi|568164383|ref|YP_008947889.1|	-	3.4	7.9	6.3	20	5.4	0.3	2.4	1	1	1	2	2	2	0	Uncharacterized	conserved	protein	(DUF2203)
H-kinase_dim	PF02895.9	gi|568164383|ref|YP_008947889.1|	-	4.7	7.6	6.7	1.7e+02	2.6	4.6	2.6	1	1	0	1	1	1	0	Signal	transducing	histidine	kinase,	homodimeric	domain
DUF4200	PF13863.1	gi|568164383|ref|YP_008947889.1|	-	4.9	7.1	9.8	24	4.8	0.9	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4200)
DUF972	PF06156.8	gi|568164383|ref|YP_008947889.1|	-	5.6	7.3	7.0	10	6.5	2.2	2.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF972)
Med4	PF10018.4	gi|568164383|ref|YP_008947889.1|	-	7.1	5.9	8.1	2.5	7.4	2.6	2.0	1	1	1	2	2	2	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
Pyr_redox	PF00070.22	gi|568164385|ref|YP_008947891.1|	-	8.5e-17	61.3	4.3	6.8e-15	55.2	0.7	2.6	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.9	gi|568164385|ref|YP_008947891.1|	-	1.3e-14	54.5	0.0	6e-13	49.1	0.0	2.2	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|568164385|ref|YP_008947891.1|	-	6.4e-09	36.1	0.2	5e-08	33.2	0.0	2.3	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|568164385|ref|YP_008947891.1|	-	7.5e-06	25.0	6.3	0.18	10.6	0.5	4.0	3	1	1	4	4	4	3	FAD	dependent	oxidoreductase
K_oxygenase	PF13434.1	gi|568164385|ref|YP_008947891.1|	-	0.0001	21.3	0.7	0.00035	19.6	0.0	1.9	2	0	0	2	2	2	1	L-lysine	6-monooxygenase	(NADPH-requiring)
NAD_binding_8	PF13450.1	gi|568164385|ref|YP_008947891.1|	-	0.0068	16.4	0.1	5.3	7.1	0.0	2.9	3	0	0	3	3	3	2	NAD(P)-binding	Rossmann-like	domain
NAD_binding_9	PF13454.1	gi|568164385|ref|YP_008947891.1|	-	0.013	15.3	2.5	3.4	7.4	0.0	3.2	3	0	0	3	3	3	0	FAD-NAD(P)-binding
HycI	PF01750.13	gi|568164385|ref|YP_008947891.1|	-	0.017	14.7	0.3	5.7	6.5	0.0	2.5	2	0	0	2	2	2	0	Hydrogenase	maturation	protease
HI0933_like	PF03486.9	gi|568164385|ref|YP_008947891.1|	-	0.095	11.1	1.7	1.1	7.6	0.2	3.0	3	1	0	3	3	3	0	HI0933-like	protein
FAD_binding_3	PF01494.14	gi|568164385|ref|YP_008947891.1|	-	0.17	10.8	2.0	0.25	10.3	0.2	1.8	2	0	0	2	2	2	0	FAD	binding	domain
TPP_enzyme_N	PF02776.13	gi|568164386|ref|YP_008947892.1|	-	1.2e-49	168.1	0.2	6.6e-48	162.4	0.0	2.2	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|568164386|ref|YP_008947892.1|	-	6.8e-40	136.1	1.1	2.5e-39	134.3	0.0	2.3	2	1	1	3	3	3	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.17	gi|568164386|ref|YP_008947892.1|	-	1.4e-25	89.6	0.0	2.6e-25	88.7	0.0	1.4	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
POR_N	PF01855.14	gi|568164386|ref|YP_008947892.1|	-	0.0011	18.5	0.1	0.0028	17.2	0.0	1.6	2	0	0	2	2	2	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Aldedh	PF00171.17	gi|568164387|ref|YP_008947893.1|	-	2.1e-160	534.0	0.0	2.4e-160	533.8	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
LuxC	PF05893.9	gi|568164387|ref|YP_008947893.1|	-	9.1e-05	21.3	0.0	0.0016	17.2	0.0	2.5	3	1	0	3	3	3	1	Acyl-CoA	reductase	(LuxC)
Tim44	PF04280.10	gi|568164387|ref|YP_008947893.1|	-	0.14	12.0	0.1	9.4	6.2	0.0	2.3	2	0	0	2	2	2	0	Tim44-like	domain
FAA_hydrolase	PF01557.13	gi|568164388|ref|YP_008947894.1|	-	3.7e-32	111.5	0.0	4.7e-32	111.2	0.0	1.2	1	0	0	1	1	1	1	Fumarylacetoacetate	(FAA)	hydrolase	family
Abhydrolase_6	PF12697.2	gi|568164389|ref|YP_008947895.1|	-	1.4e-33	116.7	0.0	1.6e-33	116.4	0.0	1.0	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|568164389|ref|YP_008947895.1|	-	1.1e-21	77.4	0.0	2.3e-21	76.4	0.0	1.5	1	1	0	1	1	1	1	alpha/beta	hydrolase	fold
Abhydrolase_5	PF12695.2	gi|568164389|ref|YP_008947895.1|	-	3.7e-17	62.4	0.0	4e-11	42.8	0.0	2.1	2	0	0	2	2	2	2	Alpha/beta	hydrolase	family
Peptidase_S9	PF00326.16	gi|568164389|ref|YP_008947895.1|	-	7.4e-10	38.4	0.0	7e-05	22.1	0.0	2.3	2	0	0	2	2	2	2	Prolyl	oligopeptidase	family
Thioesterase	PF00975.15	gi|568164389|ref|YP_008947895.1|	-	3.2e-08	34.0	0.0	4.3e-08	33.6	0.0	1.2	1	0	0	1	1	1	1	Thioesterase	domain
Hydrolase_4	PF12146.3	gi|568164389|ref|YP_008947895.1|	-	1.6e-06	27.8	0.0	4.7e-06	26.3	0.0	1.9	1	0	0	1	1	1	1	Putative	lysophospholipase
Abhydrolase_2	PF02230.11	gi|568164389|ref|YP_008947895.1|	-	2.5e-06	27.1	0.0	1.2e-05	24.8	0.0	1.9	2	0	0	2	2	2	1	Phospholipase/Carboxylesterase
Peptidase_S15	PF02129.13	gi|568164389|ref|YP_008947895.1|	-	9.8e-06	25.1	0.0	1.5e-05	24.5	0.0	1.3	1	0	0	1	1	1	1	X-Pro	dipeptidyl-peptidase	(S15	family)
Lipase_3	PF01764.20	gi|568164389|ref|YP_008947895.1|	-	0.00025	20.6	0.0	0.00069	19.2	0.0	1.7	1	1	0	1	1	1	1	Lipase	(class	3)
PGAP1	PF07819.8	gi|568164389|ref|YP_008947895.1|	-	0.00041	19.9	0.0	0.00081	19.0	0.0	1.5	1	0	0	1	1	1	1	PGAP1-like	protein
Abhydrolase_3	PF07859.8	gi|568164389|ref|YP_008947895.1|	-	0.0012	18.4	0.0	0.0021	17.6	0.0	1.4	1	0	0	1	1	1	1	alpha/beta	hydrolase	fold
BAAT_C	PF08840.6	gi|568164389|ref|YP_008947895.1|	-	0.0013	18.5	0.0	0.0051	16.5	0.0	1.9	1	1	0	1	1	1	1	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
Esterase	PF00756.15	gi|568164389|ref|YP_008947895.1|	-	0.0019	17.6	0.0	0.0027	17.1	0.0	1.3	1	0	0	1	1	1	1	Putative	esterase
DUF1749	PF08538.5	gi|568164389|ref|YP_008947895.1|	-	0.0044	15.9	0.0	0.0068	15.3	0.0	1.3	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1749)
Ndr	PF03096.9	gi|568164389|ref|YP_008947895.1|	-	0.0047	15.4	0.0	0.015	13.7	0.0	1.7	1	1	0	1	1	1	1	Ndr	family
AXE1	PF05448.7	gi|568164389|ref|YP_008947895.1|	-	0.0078	14.7	0.3	0.86	8.0	0.1	2.3	1	1	1	2	2	2	1	Acetyl	xylan	esterase	(AXE1)
DUF1057	PF06342.7	gi|568164389|ref|YP_008947895.1|	-	0.014	14.2	0.1	0.035	12.9	0.1	1.7	1	1	0	1	1	1	0	Alpha/beta	hydrolase	of	unknown	function	(DUF1057)
Peptidase_S28	PF05577.7	gi|568164389|ref|YP_008947895.1|	-	0.014	14.0	0.0	0.019	13.5	0.0	1.1	1	0	0	1	1	1	0	Serine	carboxypeptidase	S28
DUF915	PF06028.6	gi|568164389|ref|YP_008947895.1|	-	0.021	13.8	0.1	0.057	12.4	0.0	1.7	2	0	0	2	2	2	0	Alpha/beta	hydrolase	of	unknown	function	(DUF915)
DUF2974	PF11187.3	gi|568164389|ref|YP_008947895.1|	-	0.055	12.8	0.0	0.29	10.4	0.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2974)
DLH	PF01738.13	gi|568164389|ref|YP_008947895.1|	-	0.081	12.1	0.0	1.4	8.1	0.0	2.2	2	0	0	2	2	2	0	Dienelactone	hydrolase	family
Abhydrolase_4	PF08386.5	gi|568164389|ref|YP_008947895.1|	-	0.14	12.0	0.0	0.24	11.3	0.0	1.3	1	0	0	1	1	1	0	TAP-like	protein
Grp1_Fun34_YaaH	PF01184.14	gi|568164390|ref|YP_008947896.1|	-	1.1e-50	171.9	26.6	1.3e-50	171.6	18.5	1.1	1	0	0	1	1	1	1	GPR1/FUN34/yaaH	family
TauE	PF01925.14	gi|568164391|ref|YP_008947897.1|	-	8.8e-31	107.1	16.6	9.8e-31	107.0	11.5	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
NMN_transporter	PF04973.7	gi|568164391|ref|YP_008947897.1|	-	0.022	14.2	4.1	0.21	11.0	0.0	2.6	2	1	0	2	2	2	0	Nicotinamide	mononucleotide	transporter
EphA2_TM	PF14575.1	gi|568164391|ref|YP_008947897.1|	-	0.11	12.8	0.9	2.3	8.6	0.0	2.7	2	0	0	2	2	2	0	Ephrin	type-A	receptor	2	transmembrane	domain
DUF2116	PF09889.4	gi|568164391|ref|YP_008947897.1|	-	0.32	10.8	6.2	2.9	7.7	0.4	2.5	2	0	0	2	2	2	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
Tetraspannin	PF00335.15	gi|568164391|ref|YP_008947897.1|	-	0.85	8.8	15.3	4.8e+02	-0.2	10.6	2.4	1	1	0	1	1	1	0	Tetraspanin	family
DUF872	PF05915.7	gi|568164391|ref|YP_008947897.1|	-	0.94	9.3	7.2	1.1	9.0	0.0	3.0	2	1	1	3	3	3	0	Eukaryotic	protein	of	unknown	function	(DUF872)
ATP1G1_PLM_MAT8	PF02038.11	gi|568164391|ref|YP_008947897.1|	-	1.1	8.3	6.1	23	4.1	0.0	2.7	2	0	0	2	2	2	0	ATP1G1/PLM/MAT8	family
EMP70	PF02990.11	gi|568164391|ref|YP_008947897.1|	-	2.3	6.5	7.1	20	3.4	4.9	1.9	1	1	0	1	1	1	0	Endomembrane	protein	70
MMPL	PF03176.10	gi|568164392|ref|YP_008947898.1|	-	1.3e-62	211.4	9.1	1.8e-31	109.0	1.0	2.3	2	0	0	2	2	2	2	MMPL	family
AA_permease	PF00324.16	gi|568164393|ref|YP_008947899.1|	-	1.1e-24	86.7	56.8	1.5e-24	86.2	39.4	1.2	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease_2	PF13520.1	gi|568164393|ref|YP_008947899.1|	-	1.8e-16	59.7	61.7	2.3e-16	59.3	42.8	1.1	1	0	0	1	1	1	1	Amino	acid	permease
PIN	PF01850.16	gi|568164394|ref|YP_008947900.1|	-	5.3e-14	52.5	0.5	6.6e-14	52.2	0.4	1.1	1	0	0	1	1	1	1	PIN	domain
TFIID-18kDa	PF02269.11	gi|568164394|ref|YP_008947900.1|	-	0.029	14.1	0.0	0.048	13.4	0.0	1.5	1	0	0	1	1	1	0	Transcription	initiation	factor	IID,	18kD	subunit
DUF1279	PF06916.8	gi|568164394|ref|YP_008947900.1|	-	0.057	13.7	0.0	0.079	13.2	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1279)
DicB	PF05358.6	gi|568164394|ref|YP_008947900.1|	-	0.13	11.7	0.0	0.71	9.3	0.0	2.0	2	0	0	2	2	2	0	DicB	protein
Antitoxin-MazE	PF04014.13	gi|568164395|ref|YP_008947901.1|	-	8.1e-16	57.3	1.2	8.8e-16	57.2	0.2	1.5	2	0	0	2	2	2	1	Antidote-toxin	recognition	MazE
DUF35_N	PF12172.3	gi|568164396|ref|YP_008947902.1|	-	4.5e-08	32.7	2.0	6.6e-08	32.2	1.4	1.2	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF35	PF01796.12	gi|568164396|ref|YP_008947902.1|	-	1.6e-05	25.0	0.1	2.4e-05	24.4	0.1	1.3	1	0	0	1	1	1	1	DUF35	OB-fold	domain
DUF2082	PF09855.4	gi|568164396|ref|YP_008947902.1|	-	0.00087	19.0	1.2	0.17	11.7	0.0	2.2	1	1	1	2	2	2	2	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
HypA	PF01155.14	gi|568164396|ref|YP_008947902.1|	-	0.0081	15.8	0.1	0.014	15.1	0.1	1.3	1	0	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
zinc_ribbon_5	PF13719.1	gi|568164396|ref|YP_008947902.1|	-	0.01	15.4	1.8	0.086	12.4	0.0	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-TFIIB	PF13453.1	gi|568164396|ref|YP_008947902.1|	-	0.017	14.3	0.1	0.23	10.6	0.0	2.2	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
zinc_ribbon_4	PF13717.1	gi|568164396|ref|YP_008947902.1|	-	0.027	14.1	2.4	0.16	11.7	0.0	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
FdhE	PF04216.7	gi|568164396|ref|YP_008947902.1|	-	0.038	13.7	0.7	0.048	13.3	0.5	1.1	1	0	0	1	1	1	0	Protein	involved	in	formate	dehydrogenase	formation
TFIIS_C	PF01096.13	gi|568164396|ref|YP_008947902.1|	-	0.044	13.4	2.0	3.4	7.3	0.1	2.4	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zinc_ribbon_2	PF13240.1	gi|568164396|ref|YP_008947902.1|	-	0.081	12.4	2.4	7.1	6.2	0.2	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|568164396|ref|YP_008947902.1|	-	0.09	12.1	2.6	1.3	8.4	0.1	2.3	1	1	1	2	2	2	0	TFIIB	zinc-binding
RRN7	PF11781.3	gi|568164396|ref|YP_008947902.1|	-	0.63	9.5	4.4	11	5.5	0.4	2.4	2	0	0	2	2	2	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
Ribosomal_L33	PF00471.15	gi|568164396|ref|YP_008947902.1|	-	1.1	9.5	4.6	7.8	6.8	0.3	2.5	1	1	1	2	2	2	0	Ribosomal	protein	L33
zf-ribbon_3	PF13248.1	gi|568164396|ref|YP_008947902.1|	-	3.5	6.9	5.8	27	4.1	4.6	1.9	1	1	1	2	2	2	0	zinc-ribbon	domain
UPF0547	PF10571.4	gi|568164396|ref|YP_008947902.1|	-	4.1	7.1	6.9	2.8	7.7	0.5	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
Thiolase_C	PF02803.13	gi|568164397|ref|YP_008947903.1|	-	5.5e-05	22.5	0.2	0.00028	20.2	0.0	2.1	2	0	0	2	2	2	1	Thiolase,	C-terminal	domain
Peptidase_M22	PF00814.20	gi|568164397|ref|YP_008947903.1|	-	0.021	14.3	0.0	0.04	13.4	0.0	1.3	1	0	0	1	1	1	0	Glycoprotease	family
MR_MLE_C	PF13378.1	gi|568164398|ref|YP_008947904.1|	-	2.1e-24	85.5	0.0	4.5e-24	84.5	0.0	1.6	1	0	0	1	1	1	1	Enolase	C-terminal	domain-like
MR_MLE_N	PF02746.11	gi|568164398|ref|YP_008947904.1|	-	6e-18	64.9	0.0	1.1e-17	64.1	0.0	1.4	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	N-terminal	domain
MR_MLE	PF01188.16	gi|568164398|ref|YP_008947904.1|	-	3.2e-12	46.8	0.0	6.6e-12	45.7	0.0	1.6	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
AMP-binding	PF00501.23	gi|568164399|ref|YP_008947905.1|	-	3.1e-80	269.6	0.0	4e-80	269.2	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|568164399|ref|YP_008947905.1|	-	3.2e-18	66.4	0.2	5.5e-18	65.6	0.2	1.4	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
GH3	PF03321.8	gi|568164399|ref|YP_008947905.1|	-	0.003	16.1	0.1	0.013	14.0	0.0	2.0	3	0	0	3	3	3	1	GH3	auxin-responsive	promoter
Nuc_recep-AF1	PF11825.3	gi|568164399|ref|YP_008947905.1|	-	0.1	12.5	0.2	0.28	11.1	0.1	1.7	1	0	0	1	1	1	0	Nuclear/hormone	receptor	activator	site	AF-1
adh_short	PF00106.20	gi|568164400|ref|YP_008947906.1|	-	8.1e-32	110.4	0.0	1e-31	110.1	0.0	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
adh_short_C2	PF13561.1	gi|568164400|ref|YP_008947906.1|	-	1.1e-24	87.6	0.1	1.2e-24	87.3	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
KR	PF08659.5	gi|568164400|ref|YP_008947906.1|	-	6.3e-13	48.7	0.0	8.5e-13	48.3	0.0	1.1	1	0	0	1	1	1	1	KR	domain
Epimerase	PF01370.16	gi|568164400|ref|YP_008947906.1|	-	0.0073	15.7	0.1	0.013	14.9	0.1	1.4	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
Sugar_tr	PF00083.19	gi|568164401|ref|YP_008947907.1|	-	9.7e-23	80.4	31.8	2e-22	79.4	22.1	1.5	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|568164401|ref|YP_008947907.1|	-	2.3e-22	79.1	49.5	2.3e-22	79.1	34.3	1.9	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_2	PF13347.1	gi|568164401|ref|YP_008947907.1|	-	0.0004	18.9	6.9	0.0004	18.9	4.8	3.7	2	2	1	4	4	4	1	MFS/sugar	transport	protein
HTH_10	PF04967.7	gi|568164943|ref|YP_008947908.1|	-	3.4e-16	58.5	0.0	6.1e-16	57.7	0.0	1.4	1	0	0	1	1	1	1	HTH	DNA	binding	domain
Sigma70_r4	PF04545.11	gi|568164943|ref|YP_008947908.1|	-	0.0017	17.6	0.3	0.0049	16.1	0.0	1.9	2	0	0	2	2	2	1	Sigma-70,	region	4
LacI	PF00356.16	gi|568164943|ref|YP_008947908.1|	-	0.12	12.0	0.0	0.27	10.8	0.0	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	lacI	family
bPH_5	PF10882.3	gi|568164402|ref|YP_008947909.1|	-	0.13	12.1	0.5	0.14	11.9	0.4	1.2	1	1	0	1	1	1	0	Bacterial	PH	domain
PQQ_3	PF13570.1	gi|568164402|ref|YP_008947909.1|	-	0.14	12.4	0.1	3	8.2	0.0	2.1	2	0	0	2	2	2	0	PQQ-like	domain
Rieske	PF00355.21	gi|568164403|ref|YP_008947910.1|	-	2.3e-13	49.4	0.0	2.6e-13	49.3	0.0	1.1	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Rieske_2	PF13806.1	gi|568164403|ref|YP_008947910.1|	-	4.6e-10	39.1	0.0	5.3e-10	38.9	0.0	1.1	1	0	0	1	1	1	1	Rieske-like	[2Fe-2S]	domain
MNSV_P7B	PF06692.6	gi|568164944|ref|YP_008947911.1|	-	6.7	6.5	7.4	8.3	6.2	0.1	2.8	2	0	0	2	2	2	0	Melon	necrotic	spot	virus	P7B	protein
IlvGEDA_leader	PF08046.6	gi|568164944|ref|YP_008947911.1|	-	6.8	5.9	7.7	0.92	8.7	1.2	2.5	2	0	0	2	2	2	0	IlvGEDA	operon	leader	peptide
AAA_21	PF13304.1	gi|568164945|ref|YP_008947912.1|	-	3.7e-06	27.1	0.2	9.5e-06	25.7	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
ABC_tran	PF00005.22	gi|568164945|ref|YP_008947912.1|	-	5e-06	26.8	0.0	1.2e-05	25.6	0.0	1.6	1	0	0	1	1	1	1	ABC	transporter
SMC_N	PF02463.14	gi|568164945|ref|YP_008947912.1|	-	5.5e-05	22.4	0.0	8e-05	21.9	0.0	1.2	1	0	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
SbcCD_C	PF13558.1	gi|568164945|ref|YP_008947912.1|	-	0.00059	19.7	0.1	0.0083	16.0	0.0	2.1	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_15	PF13175.1	gi|568164945|ref|YP_008947912.1|	-	0.0023	17.0	0.0	0.0039	16.2	0.0	1.4	1	0	0	1	1	1	1	AAA	ATPase	domain
UPF0728	PF15092.1	gi|568164945|ref|YP_008947912.1|	-	0.0093	15.8	0.2	2.7	7.9	0.0	2.5	2	0	0	2	2	2	2	Uncharacterised	protein	family	UPF0728
ABC_tran	PF00005.22	gi|568164946|ref|YP_008947913.1|	-	3.9e-09	36.9	0.0	3.9e-09	36.9	0.0	1.0	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|568164946|ref|YP_008947913.1|	-	5.1e-07	29.9	0.0	5.4e-07	29.8	0.0	1.0	1	0	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|568164946|ref|YP_008947913.1|	-	6.1e-05	22.4	0.1	8.1e-05	22.0	0.1	1.2	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|568164946|ref|YP_008947913.1|	-	0.0003	21.1	0.1	0.0003	21.1	0.1	1.2	1	1	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|568164946|ref|YP_008947913.1|	-	0.0008	18.6	0.2	0.0016	17.6	0.1	1.7	1	1	0	1	1	1	1	Protein	of	unknown	function,	DUF258
SRP54	PF00448.17	gi|568164946|ref|YP_008947913.1|	-	0.001	18.5	0.0	0.0012	18.3	0.0	1.1	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SMC_N	PF02463.14	gi|568164946|ref|YP_008947913.1|	-	0.0026	17.0	0.0	0.0032	16.7	0.0	1.2	1	0	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
NTPase_1	PF03266.10	gi|568164946|ref|YP_008947913.1|	-	0.0029	17.3	0.0	0.0034	17.1	0.0	1.1	1	0	0	1	1	1	1	NTPase
AAA_30	PF13604.1	gi|568164946|ref|YP_008947913.1|	-	0.0087	15.6	0.0	0.0087	15.6	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
ABC_ATPase	PF09818.4	gi|568164946|ref|YP_008947913.1|	-	0.013	14.1	0.2	0.015	13.8	0.1	1.1	1	0	0	1	1	1	0	Predicted	ATPase	of	the	ABC	class
AAA_10	PF12846.2	gi|568164946|ref|YP_008947913.1|	-	0.014	14.8	0.0	0.014	14.8	0.0	1.0	1	0	0	1	1	1	0	AAA-like	domain
AAA_16	PF13191.1	gi|568164946|ref|YP_008947913.1|	-	0.029	14.3	0.0	0.03	14.2	0.0	1.1	1	0	0	1	1	1	0	AAA	ATPase	domain
NACHT	PF05729.7	gi|568164946|ref|YP_008947913.1|	-	0.03	13.9	0.0	0.03	13.9	0.0	1.1	1	0	0	1	1	1	0	NACHT	domain
AAA_22	PF13401.1	gi|568164946|ref|YP_008947913.1|	-	0.044	13.9	0.0	0.044	13.9	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
AAA_17	PF13207.1	gi|568164946|ref|YP_008947913.1|	-	0.049	14.4	0.3	0.058	14.2	0.2	1.3	1	1	0	1	1	1	0	AAA	domain
AAA_33	PF13671.1	gi|568164946|ref|YP_008947913.1|	-	0.068	13.0	0.2	0.098	12.5	0.1	1.3	1	1	0	1	1	1	0	AAA	domain
AAA_25	PF13481.1	gi|568164946|ref|YP_008947913.1|	-	0.071	12.5	0.0	0.071	12.5	0.0	1.1	1	0	0	1	1	1	0	AAA	domain
AAA_14	PF13173.1	gi|568164946|ref|YP_008947913.1|	-	0.083	12.7	0.0	0.083	12.7	0.0	1.1	1	0	0	1	1	1	0	AAA	domain
AAA_19	PF13245.1	gi|568164946|ref|YP_008947913.1|	-	0.093	12.5	0.0	0.1	12.3	0.0	1.1	1	0	0	1	1	1	0	Part	of	AAA	domain
MMR_HSR1	PF01926.18	gi|568164946|ref|YP_008947913.1|	-	0.11	12.4	0.0	0.12	12.3	0.0	1.2	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_5	PF07728.9	gi|568164946|ref|YP_008947913.1|	-	0.13	11.9	0.0	0.13	11.9	0.0	1.1	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
MFS_1	PF07690.11	gi|568164404|ref|YP_008947915.1|	-	1.1e-41	142.7	51.8	1.1e-41	142.7	35.9	3.5	1	1	0	2	2	2	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|568164404|ref|YP_008947915.1|	-	5.4e-08	31.8	10.7	5.4e-08	31.8	7.4	2.8	3	0	0	3	3	3	2	Sugar	(and	other)	transporter
MFS_3	PF05977.8	gi|568164404|ref|YP_008947915.1|	-	2.6e-05	22.5	10.5	0.0011	17.1	0.9	2.2	2	0	0	2	2	2	2	Transmembrane	secretion	effector
MarR	PF01047.17	gi|568164948|ref|YP_008947916.1|	-	7.3e-12	44.8	0.1	3.7e-11	42.5	0.0	2.2	2	0	0	2	2	2	1	MarR	family
HTH_27	PF13463.1	gi|568164948|ref|YP_008947916.1|	-	5.7e-11	42.5	0.1	1.9e-10	40.9	0.0	1.9	3	0	0	3	3	2	1	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|568164948|ref|YP_008947916.1|	-	4e-09	36.0	0.0	8.7e-09	34.9	0.0	1.6	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.1	gi|568164948|ref|YP_008947916.1|	-	4.4e-07	29.1	0.1	3.7e-06	26.2	0.0	2.3	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
Fe_dep_repress	PF01325.14	gi|568164948|ref|YP_008947916.1|	-	6.5e-05	22.7	0.1	0.00016	21.5	0.0	1.6	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_34	PF13601.1	gi|568164948|ref|YP_008947916.1|	-	8.4e-05	22.5	0.0	0.00015	21.6	0.0	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_45	PF14947.1	gi|568164948|ref|YP_008947916.1|	-	0.00015	21.5	0.1	0.00032	20.4	0.0	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix
GntR	PF00392.16	gi|568164948|ref|YP_008947916.1|	-	0.00069	19.0	0.1	0.0035	16.7	0.0	2.1	2	0	0	2	2	2	1	Bacterial	regulatory	proteins,	gntR	family
DUF3116	PF11313.3	gi|568164948|ref|YP_008947916.1|	-	0.0053	16.3	0.0	0.014	14.9	0.0	1.7	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3116)
PaaX	PF07848.7	gi|568164948|ref|YP_008947916.1|	-	0.0061	16.5	0.0	0.011	15.7	0.0	1.4	1	0	0	1	1	1	1	PaaX-like	protein
B-block_TFIIIC	PF04182.7	gi|568164948|ref|YP_008947916.1|	-	0.013	15.3	0.0	0.027	14.3	0.0	1.7	1	1	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
TrmB	PF01978.14	gi|568164948|ref|YP_008947916.1|	-	0.013	15.2	1.4	0.035	13.8	0.1	2.2	2	1	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
PadR	PF03551.9	gi|568164948|ref|YP_008947916.1|	-	0.016	14.9	0.3	0.048	13.4	0.1	1.9	2	0	0	2	2	2	0	Transcriptional	regulator	PadR-like	family
HTH_Tnp_4	PF13613.1	gi|568164948|ref|YP_008947916.1|	-	0.025	14.1	0.1	0.08	12.4	0.0	1.9	2	0	0	2	2	2	0	Helix-turn-helix	of	DDE	superfamily	endonuclease
TYW3	PF02676.9	gi|568164948|ref|YP_008947916.1|	-	0.025	13.7	0.2	0.042	12.9	0.1	1.3	1	0	0	1	1	1	0	Methyltransferase	TYW3
Mrr_N	PF14338.1	gi|568164948|ref|YP_008947916.1|	-	0.033	14.2	0.3	0.1	12.6	0.0	2.0	3	0	0	3	3	2	0	Mrr	N-terminal	domain
HTH_5	PF01022.15	gi|568164948|ref|YP_008947916.1|	-	0.046	13.3	0.2	0.24	11.0	0.0	2.2	3	0	0	3	3	2	0	Bacterial	regulatory	protein,	arsR	family
HTH_11	PF08279.7	gi|568164948|ref|YP_008947916.1|	-	0.052	13.2	0.1	0.2	11.3	0.0	2.1	2	0	0	2	2	2	0	HTH	domain
HTH_10	PF04967.7	gi|568164948|ref|YP_008947916.1|	-	0.063	12.8	0.0	0.21	11.2	0.0	1.9	1	0	0	1	1	1	0	HTH	DNA	binding	domain
FeoC	PF09012.5	gi|568164948|ref|YP_008947916.1|	-	0.07	12.8	0.0	0.15	11.7	0.0	1.5	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
HTH_20	PF12840.2	gi|568164948|ref|YP_008947916.1|	-	0.12	12.2	0.1	0.38	10.5	0.0	1.9	3	0	0	3	3	2	0	Helix-turn-helix	domain
DUF4384	PF14326.1	gi|568164950|ref|YP_008947918.1|	-	0.082	12.7	0.0	0.13	12.0	0.0	1.4	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4384)
Antitoxin-MazE	PF04014.13	gi|568164405|ref|YP_008947919.1|	-	7.5e-14	51.0	0.5	9.5e-14	50.7	0.4	1.2	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
AbrB-like	PF14250.1	gi|568164405|ref|YP_008947919.1|	-	0.0077	16.1	0.0	0.01	15.6	0.0	1.2	1	0	0	1	1	1	1	AbrB-like	transcriptional	regulator
CDC48_N	PF02359.13	gi|568164405|ref|YP_008947919.1|	-	0.05	13.5	0.0	0.058	13.3	0.0	1.2	1	0	0	1	1	1	0	Cell	division	protein	48	(CDC48),	N-terminal	domain
PIN	PF01850.16	gi|568164406|ref|YP_008947920.1|	-	1.3e-19	70.7	1.7	1.4e-19	70.5	1.2	1.0	1	0	0	1	1	1	1	PIN	domain
PIN_4	PF13638.1	gi|568164406|ref|YP_008947920.1|	-	0.002	18.2	0.6	0.0032	17.5	0.4	1.5	1	1	0	1	1	1	1	PIN	domain
RBD-FIP	PF09457.5	gi|568164951|ref|YP_008947921.1|	-	0.0075	16.0	0.8	0.014	15.2	0.6	1.4	1	0	0	1	1	1	1	FIP	domain
Methyltransf_21	PF05050.7	gi|568164953|ref|YP_008947923.1|	-	0.084	12.8	0.0	0.084	12.8	0.0	1.0	1	0	0	1	1	1	0	Methyltransferase	FkbM	domain
Glycos_transf_2	PF00535.21	gi|568164407|ref|YP_008947924.1|	-	5.9e-16	58.6	3.1	5.9e-16	58.6	2.2	1.6	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|568164407|ref|YP_008947924.1|	-	6.6e-06	26.0	0.0	9.4e-06	25.5	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
DoxD	PF04173.8	gi|568164408|ref|YP_008947925.1|	-	1.8e-43	148.0	7.9	2.2e-43	147.8	5.4	1.0	1	0	0	1	1	1	1	TQO	small	subunit	DoxD
DoxX	PF07681.7	gi|568164408|ref|YP_008947925.1|	-	1.1e-06	28.9	2.3	2.2e-06	27.9	1.6	1.5	1	0	0	1	1	1	1	DoxX
PQQ	PF01011.16	gi|568164410|ref|YP_008947927.1|	-	0.043	13.3	0.0	10	5.8	0.0	2.8	2	0	0	2	2	2	0	PQQ	enzyme	repeat
DrsE	PF02635.10	gi|568164411|ref|YP_008947928.1|	-	6.2e-05	23.0	0.0	7e-05	22.8	0.0	1.1	1	0	0	1	1	1	1	DsrE/DsrF-like	family
DUF1599	PF07659.6	gi|568164412|ref|YP_008947929.1|	-	0.047	13.7	0.0	0.11	12.6	0.0	1.6	1	1	0	1	1	1	0	Domain	of	Unknown	Function	(DUF1599)
TusA	PF01206.12	gi|568164413|ref|YP_008947930.1|	-	5.3e-11	41.9	0.0	9.2e-11	41.2	0.0	1.4	1	0	0	1	1	1	1	Sulfurtransferase	TusA
DrsE_2	PF13686.1	gi|568164414|ref|YP_008947931.1|	-	2.7e-12	46.6	0.5	1.7e-05	24.6	0.0	2.0	1	1	1	2	2	2	2	DsrE/DsrF/DrsH-like	family
DrsE	PF02635.10	gi|568164414|ref|YP_008947931.1|	-	5.5e-08	32.9	0.0	6.2e-08	32.7	0.0	1.1	1	0	0	1	1	1	1	DsrE/DsrF-like	family
DUF202	PF02656.10	gi|568164415|ref|YP_008947932.1|	-	0.022	14.9	4.2	1.7	8.9	0.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF202)
Sulf_transp	PF04143.9	gi|568164416|ref|YP_008947933.1|	-	7.1e-17	61.1	39.1	7.6e-12	45.0	4.0	4.3	4	0	0	4	4	4	2	Sulphur	transport
VIT1	PF01988.14	gi|568164416|ref|YP_008947933.1|	-	0.13	11.7	0.1	0.13	11.7	0.0	3.8	4	1	1	5	5	5	0	VIT	family
TusA	PF01206.12	gi|568164417|ref|YP_008947934.1|	-	2.4e-19	68.6	0.1	2.8e-19	68.4	0.1	1.0	1	0	0	1	1	1	1	Sulfurtransferase	TusA
DUF2249	PF10006.4	gi|568164417|ref|YP_008947934.1|	-	0.00032	20.2	0.0	0.00046	19.7	0.0	1.4	1	1	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2249)
NicO	PF03824.11	gi|568164418|ref|YP_008947935.1|	-	7.4e-84	281.3	14.1	9.7e-84	281.0	9.8	1.1	1	0	0	1	1	1	1	High-affinity	nickel-transport	protein
DUF2231	PF09990.4	gi|568164418|ref|YP_008947935.1|	-	2.4	8.5	10.0	0.18	12.1	1.2	3.0	2	1	1	3	3	3	0	Predicted	membrane	protein	(DUF2231)
Glycos_transf_2	PF00535.21	gi|568164954|ref|YP_008947936.1|	-	2e-05	24.3	0.1	6.4e-05	22.6	0.1	1.8	1	1	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|568164954|ref|YP_008947936.1|	-	0.11	12.2	0.0	0.27	11.0	0.0	1.7	2	1	0	2	2	2	0	Glycosyltransferase	like	family	2
TPR_11	PF13414.1	gi|568164956|ref|YP_008947938.1|	-	2.3e-78	257.7	34.4	3.3e-18	65.0	0.1	6.8	2	2	3	7	7	7	7	TPR	repeat
TPR_2	PF07719.12	gi|568164956|ref|YP_008947938.1|	-	2.9e-68	220.3	41.6	1.5e-07	30.8	1.9	11.1	11	0	0	11	11	11	10	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|568164956|ref|YP_008947938.1|	-	7.6e-63	205.7	50.4	9.7e-07	28.1	0.0	11.1	11	0	0	11	11	11	10	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|568164956|ref|YP_008947938.1|	-	8.8e-60	194.0	37.1	2.6e-07	30.3	0.1	11.5	12	0	0	12	12	11	10	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|568164956|ref|YP_008947938.1|	-	2.8e-50	167.9	16.0	1.4e-09	38.3	0.1	7.1	5	2	2	7	7	7	7	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|568164956|ref|YP_008947938.1|	-	4e-41	135.7	3.5	0.0038	17.7	0.1	10.2	2	1	8	10	10	10	10	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|568164956|ref|YP_008947938.1|	-	1.6e-37	124.4	44.1	3.6e-06	26.3	0.1	10.5	6	2	5	11	11	10	9	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|568164956|ref|YP_008947938.1|	-	3.3e-32	110.6	19.7	1.3e-07	31.8	0.2	7.1	2	1	6	8	8	8	8	Tetratricopeptide	repeat
TPR_9	PF13371.1	gi|568164956|ref|YP_008947938.1|	-	4.8e-30	103.2	1.1	8.1e-06	25.6	0.0	7.0	3	1	4	7	7	7	7	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|568164956|ref|YP_008947938.1|	-	1.2e-27	95.8	19.8	1.4e-06	28.3	0.1	5.4	2	1	3	5	5	5	5	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_12	PF13424.1	gi|568164956|ref|YP_008947938.1|	-	2.4e-27	94.6	27.6	2.4e-06	27.3	0.1	6.8	1	1	4	7	7	7	7	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|568164956|ref|YP_008947938.1|	-	3.4e-17	61.6	26.2	0.075	13.5	0.0	10.3	10	1	0	10	10	10	5	Tetratricopeptide	repeat
NARP1	PF12569.3	gi|568164956|ref|YP_008947938.1|	-	4.9e-16	58.5	6.8	0.0017	17.1	0.0	6.2	1	1	5	8	8	8	6	NMDA	receptor-regulated	protein	1
TPR_20	PF14561.1	gi|568164956|ref|YP_008947938.1|	-	4e-15	55.6	0.9	0.016	15.2	0.0	6.0	3	2	3	6	6	6	4	Tetratricopeptide	repeat
BTAD	PF03704.12	gi|568164956|ref|YP_008947938.1|	-	7.4e-08	32.8	1.7	0.037	14.3	0.1	4.7	3	3	1	4	4	4	2	Bacterial	transcriptional	activator	domain
TPR_7	PF13176.1	gi|568164956|ref|YP_008947938.1|	-	2.1e-07	30.1	14.6	6.1	6.8	0.0	9.2	10	0	0	10	10	10	0	Tetratricopeptide	repeat
Syntaxin-6_N	PF09177.6	gi|568164956|ref|YP_008947938.1|	-	6.7e-07	29.6	1.8	1.1	9.7	0.0	5.2	2	1	5	7	7	6	2	Syntaxin	6,	N-terminal
Apc5	PF12862.2	gi|568164956|ref|YP_008947938.1|	-	8.9e-07	28.6	4.9	0.8	9.5	0.2	5.7	2	1	2	5	5	5	2	Anaphase-promoting	complex	subunit	5
DUF3808	PF10300.4	gi|568164956|ref|YP_008947938.1|	-	9.1e-07	27.7	6.1	0.044	12.3	0.0	3.6	1	1	2	4	4	4	3	Protein	of	unknown	function	(DUF3808)
TPR_15	PF13429.1	gi|568164956|ref|YP_008947938.1|	-	2.7e-06	26.6	4.5	0.00055	19.0	0.3	3.9	1	1	2	3	3	3	2	Tetratricopeptide	repeat
SHNi-TPR	PF10516.4	gi|568164956|ref|YP_008947938.1|	-	6.7e-06	25.2	7.1	5.5	6.3	0.0	7.6	8	0	0	8	8	8	0	SHNi-TPR
MIT	PF04212.13	gi|568164956|ref|YP_008947938.1|	-	2.4e-05	24.0	17.4	0.0074	16.1	0.2	6.9	5	3	2	8	8	7	1	MIT	(microtubule	interacting	and	transport)	domain
TPR_10	PF13374.1	gi|568164956|ref|YP_008947938.1|	-	0.00011	22.0	9.3	3.3	7.7	0.0	7.0	8	0	0	8	8	7	1	Tetratricopeptide	repeat
Fis1_TPR_C	PF14853.1	gi|568164956|ref|YP_008947938.1|	-	0.00028	20.6	17.6	0.38	10.6	0.0	7.4	7	1	1	8	8	7	1	Fis1	C-terminal	tetratricopeptide	repeat
DUF3856	PF12968.2	gi|568164956|ref|YP_008947938.1|	-	0.00059	19.6	0.6	8.3	6.2	0.0	5.9	3	2	2	5	5	5	0	Domain	of	Unknown	Function	(DUF3856)
DUF3209	PF11483.3	gi|568164956|ref|YP_008947938.1|	-	0.00072	19.8	11.5	2.1	8.7	0.0	6.0	2	2	3	7	7	6	1	Protein	of	unknown	function	(DUF3209)
TOM20_plant	PF06552.7	gi|568164956|ref|YP_008947938.1|	-	0.0011	18.5	7.6	1.8	8.1	0.0	5.7	2	1	4	6	6	6	1	Plant	specific	mitochondrial	import	receptor	subunit	TOM20
SNAP	PF14938.1	gi|568164956|ref|YP_008947938.1|	-	0.025	13.7	9.6	2.3	7.3	0.3	4.8	4	1	0	4	4	4	0	Soluble	NSF	attachment	protein,	SNAP
EST1_DNA_bind	PF10373.4	gi|568164956|ref|YP_008947938.1|	-	0.051	12.7	5.3	16	4.5	0.0	4.7	5	1	0	5	5	5	0	Est1	DNA/RNA	binding	domain
YfiO	PF13525.1	gi|568164956|ref|YP_008947938.1|	-	0.053	12.9	21.9	2	7.8	2.8	6.4	1	1	2	4	4	4	0	Outer	membrane	lipoprotein
TPR_21	PF09976.4	gi|568164956|ref|YP_008947938.1|	-	0.057	13.3	9.2	0.86	9.5	0.0	4.1	4	2	0	4	4	3	0	Tetratricopeptide	repeat
Streptin-Immun	PF11083.3	gi|568164956|ref|YP_008947938.1|	-	0.088	12.8	1.0	1.7	8.6	0.2	2.9	2	0	0	2	2	2	0	Lantibiotic	streptin	immunity	protein
Snapin_Pallidin	PF14712.1	gi|568164956|ref|YP_008947938.1|	-	0.1	12.9	0.1	25	5.2	0.1	3.2	3	0	0	3	3	2	0	Snapin/Pallidin
DUF3366	PF11846.3	gi|568164956|ref|YP_008947938.1|	-	0.17	11.7	1.1	0.65	9.8	0.1	2.2	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF3366)
Gin	PF10764.4	gi|568164956|ref|YP_008947938.1|	-	1.2	8.8	11.3	22	4.8	0.1	6.1	8	0	0	8	8	6	0	Inhibitor	of	sigma-G	Gin
SNN_cytoplasm	PF09051.5	gi|568164956|ref|YP_008947938.1|	-	2.2	8.1	5.9	2.7	7.7	0.0	2.7	3	0	0	3	3	2	0	Stannin	cytoplasmic
Arch_ATPase	PF01637.13	gi|568164419|ref|YP_008947939.1|	-	2.4e-38	132.1	1.5	2.4e-38	132.1	1.0	1.5	2	0	0	2	2	2	1	Archaeal	ATPase
AAA_14	PF13173.1	gi|568164419|ref|YP_008947939.1|	-	2e-09	37.4	0.9	5.5e-07	29.5	0.1	2.7	2	1	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|568164419|ref|YP_008947939.1|	-	1.1e-06	28.7	0.1	9.1e-06	25.8	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|568164419|ref|YP_008947939.1|	-	1.7e-05	24.9	0.1	3.9e-05	23.7	0.1	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA	PF00004.24	gi|568164419|ref|YP_008947939.1|	-	0.0005	20.2	0.1	0.0099	16.0	0.0	2.4	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
INT_SG_DDX_CT_C	PF15300.1	gi|568164419|ref|YP_008947939.1|	-	0.0071	15.7	0.4	0.096	12.1	0.1	2.5	2	0	0	2	2	2	1	INTS6/SAGE1/DDX26B/CT45	C-terminus
TrmB	PF01978.14	gi|568164419|ref|YP_008947939.1|	-	0.0078	15.9	0.2	0.033	13.9	0.0	2.0	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
DUF815	PF05673.8	gi|568164419|ref|YP_008947939.1|	-	0.082	11.8	0.0	0.13	11.1	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
rRNA_proc-arch	PF13234.1	gi|568164419|ref|YP_008947939.1|	-	0.11	11.6	0.0	0.19	10.8	0.0	1.3	1	0	0	1	1	1	0	rRNA-processing	arch	domain
bPH_2	PF03703.9	gi|568164957|ref|YP_008947940.1|	-	9.3e-12	44.8	0.4	1.6e-11	44.0	0.0	1.6	2	0	0	2	2	2	1	Bacterial	PH	domain
DUF1212	PF06738.7	gi|568164957|ref|YP_008947940.1|	-	0.0037	16.7	0.6	0.058	12.8	0.0	2.1	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1212)
GvpG	PF05120.7	gi|568164957|ref|YP_008947940.1|	-	0.0038	16.9	0.8	0.0061	16.3	0.5	1.2	1	0	0	1	1	1	1	Gas	vesicle	protein	G
DMAP_binding	PF06464.6	gi|568164957|ref|YP_008947940.1|	-	0.36	11.4	2.6	0.57	10.7	1.8	1.2	1	0	0	1	1	1	0	DMAP1-binding	Domain
CHAD	PF05235.9	gi|568164420|ref|YP_008947943.1|	-	6.5e-07	29.1	2.0	0.008	15.7	0.1	2.5	1	1	2	3	3	3	3	CHAD	domain
Thymidylate_kin	PF02223.12	gi|568164421|ref|YP_008947944.1|	-	1.6e-11	43.9	0.0	1.9e-11	43.6	0.0	1.1	1	0	0	1	1	1	1	Thymidylate	kinase
AAA_17	PF13207.1	gi|568164421|ref|YP_008947944.1|	-	0.00073	20.3	0.0	0.0016	19.2	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|568164421|ref|YP_008947944.1|	-	0.00098	19.4	0.0	0.004	17.4	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
UPF0079	PF02367.12	gi|568164421|ref|YP_008947944.1|	-	0.0047	16.5	0.0	0.055	13.0	0.0	2.2	2	0	0	2	2	2	1	Uncharacterised	P-loop	hydrolase	UPF0079
KTI12	PF08433.5	gi|568164421|ref|YP_008947944.1|	-	0.012	14.8	0.0	0.022	13.9	0.0	1.5	1	1	0	1	1	1	0	Chromatin	associated	protein	KTI12
CPT	PF07931.7	gi|568164421|ref|YP_008947944.1|	-	0.012	15.2	0.0	0.017	14.7	0.0	1.3	1	0	0	1	1	1	0	Chloramphenicol	phosphotransferase-like	protein
AAA_30	PF13604.1	gi|568164421|ref|YP_008947944.1|	-	0.014	15.0	0.0	0.017	14.7	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
AAA_16	PF13191.1	gi|568164421|ref|YP_008947944.1|	-	0.027	14.4	0.0	0.046	13.7	0.0	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
ATP-synt_ab	PF00006.20	gi|568164421|ref|YP_008947944.1|	-	0.029	13.8	0.0	0.044	13.2	0.0	1.3	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP_bind_1	PF03029.12	gi|568164421|ref|YP_008947944.1|	-	0.032	13.7	0.0	0.071	12.6	0.0	1.6	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
AAA_14	PF13173.1	gi|568164421|ref|YP_008947944.1|	-	0.033	14.0	0.1	0.07	13.0	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
MobB	PF03205.9	gi|568164421|ref|YP_008947944.1|	-	0.038	13.6	0.0	0.074	12.7	0.0	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ArgK	PF03308.11	gi|568164421|ref|YP_008947944.1|	-	0.054	12.2	0.1	0.092	11.5	0.0	1.3	1	0	0	1	1	1	0	ArgK	protein
AAA_33	PF13671.1	gi|568164421|ref|YP_008947944.1|	-	0.075	12.9	0.0	0.13	12.1	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
Thymidylate_kin	PF02223.12	gi|568164422|ref|YP_008947945.1|	-	2.8e-29	101.8	0.0	6.7e-29	100.5	0.0	1.5	1	1	0	1	1	1	1	Thymidylate	kinase
AAA_18	PF13238.1	gi|568164422|ref|YP_008947945.1|	-	6e-05	23.3	0.1	0.00029	21.1	0.0	2.1	1	1	1	2	2	2	1	AAA	domain
AAA_33	PF13671.1	gi|568164422|ref|YP_008947945.1|	-	0.0043	16.9	0.0	0.0086	15.9	0.0	1.5	2	0	0	2	2	2	1	AAA	domain
dNK	PF01712.14	gi|568164422|ref|YP_008947945.1|	-	0.017	15.0	0.1	0.03	14.2	0.1	1.6	1	1	0	1	1	1	0	Deoxynucleoside	kinase
Ppx-GppA	PF02541.11	gi|568164423|ref|YP_008947946.1|	-	2.1e-41	142.0	0.0	3e-41	141.4	0.0	1.2	1	0	0	1	1	1	1	Ppx/GppA	phosphatase	family
His_Phos_1	PF00300.17	gi|568164424|ref|YP_008947947.1|	-	8.2e-15	55.2	0.1	1.6e-13	51.0	0.0	2.0	1	1	1	2	2	2	1	Histidine	phosphatase	superfamily	(branch	1)
B12-binding	PF02310.14	gi|568164425|ref|YP_008947948.1|	-	0.0016	18.2	0.0	0.0032	17.3	0.0	1.5	1	0	0	1	1	1	1	B12	binding	domain
UbiD	PF01977.11	gi|568164426|ref|YP_008947949.1|	-	4.5e-113	377.7	0.0	5.2e-113	377.5	0.0	1.0	1	0	0	1	1	1	1	3-octaprenyl-4-hydroxybenzoate	carboxy-lyase
Cyclase	PF04199.8	gi|568164427|ref|YP_008947951.1|	-	1.8e-19	70.0	0.0	2.3e-19	69.7	0.0	1.1	1	0	0	1	1	1	1	Putative	cyclase
ADH_N	PF08240.7	gi|568164428|ref|YP_008947952.1|	-	1.2e-33	115.1	0.1	2e-33	114.3	0.1	1.4	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|568164428|ref|YP_008947952.1|	-	2e-23	82.3	0.1	3.6e-23	81.5	0.1	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|568164428|ref|YP_008947952.1|	-	6.7e-18	65.7	0.0	1.1e-17	65.1	0.0	1.3	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
DapB_N	PF01113.15	gi|568164428|ref|YP_008947952.1|	-	0.00018	21.3	0.9	0.00034	20.5	0.6	1.4	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
Methyltransf_31	PF13847.1	gi|568164428|ref|YP_008947952.1|	-	0.0006	19.4	0.0	0.00093	18.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|568164428|ref|YP_008947952.1|	-	0.00086	19.8	0.0	0.0015	19.1	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|568164428|ref|YP_008947952.1|	-	0.017	15.5	0.0	0.03	14.8	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
MFS_1	PF07690.11	gi|568164429|ref|YP_008947954.1|	-	3.4e-20	72.0	45.7	3.4e-20	72.0	31.7	2.2	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|568164429|ref|YP_008947954.1|	-	5.4e-18	64.7	39.4	1.8e-13	49.8	9.8	2.8	1	1	0	2	2	2	2	Sugar	(and	other)	transporter
Transgly_assoc	PF04226.8	gi|568164429|ref|YP_008947954.1|	-	0.014	15.4	9.9	0.014	15.4	6.8	5.2	6	0	0	6	6	6	0	Transglycosylase	associated	protein
SHOCT	PF09851.4	gi|568164429|ref|YP_008947954.1|	-	0.11	11.9	0.5	0.21	11.1	0.4	1.5	1	0	0	1	1	1	0	Short	C-terminal	domain
MtrG	PF04210.8	gi|568164429|ref|YP_008947954.1|	-	1.2	8.8	5.9	4.6	6.9	0.1	2.8	2	0	0	2	2	2	0	Tetrahydromethanopterin	S-methyltransferase,	subunit	G
OppC_N	PF12911.2	gi|568164429|ref|YP_008947954.1|	-	3.8	6.9	6.3	3.8	6.9	0.2	3.5	3	0	0	3	3	3	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
Rieske	PF00355.21	gi|568164430|ref|YP_008947955.1|	-	1.1e-18	66.6	0.0	1.7e-18	66.0	0.0	1.3	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Ring_hydroxyl_A	PF00848.14	gi|568164430|ref|YP_008947955.1|	-	8.8e-13	48.3	0.0	3.9e-12	46.2	0.0	1.9	1	1	0	1	1	1	1	Ring	hydroxylating	alpha	subunit	(catalytic	domain)
Ring_hydroxyl_B	PF00866.13	gi|568164431|ref|YP_008947956.1|	-	1.7e-25	89.3	0.1	2e-25	89.1	0.1	1.0	1	0	0	1	1	1	1	Ring	hydroxylating	beta	subunit
WVELL	PF14043.1	gi|568164431|ref|YP_008947956.1|	-	0.013	15.0	0.1	0.024	14.2	0.0	1.4	1	0	0	1	1	1	0	WVELL	protein
VID27	PF08553.5	gi|568164431|ref|YP_008947956.1|	-	0.04	12.1	0.0	0.049	11.8	0.0	1.1	1	0	0	1	1	1	0	VID27	cytoplasmic	protein
DUF3872	PF12988.2	gi|568164431|ref|YP_008947956.1|	-	0.086	12.3	0.1	0.11	11.9	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function,	B.	Theta	Gene	description	(DUF3872)
HTH_10	PF04967.7	gi|568164432|ref|YP_008947957.1|	-	1e-22	79.4	0.0	5.4e-22	77.1	0.0	2.1	2	0	0	2	2	2	1	HTH	DNA	binding	domain
GerE	PF00196.14	gi|568164432|ref|YP_008947957.1|	-	9.1e-05	21.6	0.3	0.026	13.8	0.0	2.9	3	0	0	3	3	3	2	Bacterial	regulatory	proteins,	luxR	family
HTH_24	PF13412.1	gi|568164432|ref|YP_008947957.1|	-	0.021	14.2	2.0	0.75	9.2	0.0	4.2	6	0	0	6	6	6	0	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|568164432|ref|YP_008947957.1|	-	0.065	12.8	0.0	22	4.7	0.0	3.3	3	0	0	3	3	3	0	HTH	domain
HTH_5	PF01022.15	gi|568164432|ref|YP_008947957.1|	-	0.066	12.8	0.0	0.43	10.2	0.0	2.2	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
HTH_17	PF12728.2	gi|568164432|ref|YP_008947957.1|	-	0.073	13.3	0.0	6.2	7.1	0.0	2.9	2	0	0	2	2	2	0	Helix-turn-helix	domain
AMP-binding	PF00501.23	gi|568164433|ref|YP_008947958.1|	-	9e-85	284.5	0.0	1.1e-84	284.2	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|568164433|ref|YP_008947958.1|	-	8.7e-19	68.2	0.5	1.9e-18	67.1	0.3	1.6	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
DUF348	PF03990.9	gi|568164433|ref|YP_008947958.1|	-	0.1	12.2	0.0	0.76	9.4	0.0	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF348)
ECH	PF00378.15	gi|568164434|ref|YP_008947959.1|	-	5e-54	183.0	0.0	5.8e-54	182.7	0.0	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
ECH_C	PF13766.1	gi|568164434|ref|YP_008947959.1|	-	0.071	13.2	0.0	0.14	12.2	0.0	1.5	1	0	0	1	1	1	0	2-enoyl-CoA	Hydratase	C-terminal	region
Peptidase_S49	PF01343.13	gi|568164434|ref|YP_008947959.1|	-	0.16	11.7	0.0	0.39	10.4	0.0	1.7	2	0	0	2	2	2	0	Peptidase	family	S49
Ald_Xan_dh_C2	PF02738.13	gi|568164435|ref|YP_008947960.1|	-	1.3e-89	300.9	0.0	1.8e-89	300.5	0.0	1.1	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|568164435|ref|YP_008947960.1|	-	3.4e-22	78.5	0.0	7.6e-22	77.4	0.0	1.6	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
Sugar_tr	PF00083.19	gi|568164436|ref|YP_008947961.1|	-	2.9e-33	115.1	27.0	3.8e-33	114.7	18.7	1.0	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|568164436|ref|YP_008947961.1|	-	5.4e-20	71.3	52.0	1.4e-17	63.4	18.2	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
BT1	PF03092.11	gi|568164436|ref|YP_008947961.1|	-	0.00019	20.2	5.1	0.00019	20.2	3.5	1.5	1	1	0	1	1	1	1	BT1	family
DUF2636	PF11120.3	gi|568164436|ref|YP_008947961.1|	-	0.19	11.2	1.7	0.34	10.4	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2636)
Shikimate_dh_N	PF08501.6	gi|568164437|ref|YP_008947962.1|	-	2.1e-24	85.3	0.0	8.8e-24	83.3	0.0	2.1	3	0	0	3	3	3	1	Shikimate	dehydrogenase	substrate	binding	domain
DUF962	PF06127.6	gi|568164438|ref|YP_008947963.1|	-	0.11	12.4	3.5	0.3	10.9	0.2	2.8	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF962)
DUF4309	PF14172.1	gi|568164962|ref|YP_008947964.1|	-	0.36	10.7	2.8	14	5.7	0.3	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4309)
Hemerythrin	PF01814.18	gi|568164439|ref|YP_008947965.1|	-	1e-10	41.9	1.2	1.1e-06	28.8	0.3	2.1	1	1	0	2	2	2	2	Hemerythrin	HHE	cation	binding	domain
DUF2249	PF10006.4	gi|568164440|ref|YP_008947966.1|	-	1.5e-18	66.0	0.0	2.4e-18	65.4	0.0	1.3	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2249)
Cupin_2	PF07883.6	gi|568164440|ref|YP_008947966.1|	-	1.6e-06	27.4	0.1	6.5e-06	25.5	0.0	1.9	2	0	0	2	2	2	1	Cupin	domain
AraC_binding	PF02311.14	gi|568164440|ref|YP_008947966.1|	-	7.2e-05	22.4	0.0	0.00012	21.8	0.0	1.3	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
Cupin_1	PF00190.17	gi|568164440|ref|YP_008947966.1|	-	0.00017	21.0	0.0	0.0003	20.2	0.0	1.6	1	0	0	1	1	1	1	Cupin
Auxin_BP	PF02041.11	gi|568164440|ref|YP_008947966.1|	-	0.0064	15.9	0.0	0.012	15.0	0.0	1.5	1	0	0	1	1	1	1	Auxin	binding	protein
Cupin_6	PF12852.2	gi|568164440|ref|YP_008947966.1|	-	0.023	14.3	0.0	0.037	13.6	0.0	1.3	1	0	0	1	1	1	0	Cupin
DUF3986	PF13143.1	gi|568164440|ref|YP_008947966.1|	-	0.039	14.3	0.4	0.064	13.7	0.3	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3986)
Cupin_3	PF05899.7	gi|568164440|ref|YP_008947966.1|	-	0.043	13.2	0.0	0.086	12.2	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF861)
DUF59	PF01883.14	gi|568164441|ref|YP_008947967.1|	-	5.6e-16	58.2	0.1	7e-16	57.9	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF59
S-AdoMet_synt_N	PF00438.15	gi|568164963|ref|YP_008947969.1|	-	0.15	12.3	0.1	0.78	9.9	0.0	2.1	2	1	0	2	2	2	0	S-adenosylmethionine	synthetase,	N-terminal	domain
MFS_1	PF07690.11	gi|568164443|ref|YP_008947970.1|	-	1.4e-40	139.1	74.3	8.7e-31	106.9	32.6	1.8	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|568164443|ref|YP_008947970.1|	-	1.8e-06	26.4	15.6	2.4e-05	22.6	3.8	2.1	2	0	0	2	2	2	2	Transmembrane	secretion	effector
Integrase_Zn	PF02022.14	gi|568164444|ref|YP_008947971.1|	-	0.0084	15.5	0.2	0.044	13.2	0.0	2.0	1	1	1	2	2	2	1	Integrase	Zinc	binding	domain
Sugar_tr	PF00083.19	gi|568164445|ref|YP_008947972.1|	-	2.2e-29	102.3	23.9	3.1e-29	101.8	16.5	1.1	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|568164445|ref|YP_008947972.1|	-	1.3e-21	76.7	30.7	1.3e-21	76.7	21.3	1.7	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
DUF883	PF05957.8	gi|568164446|ref|YP_008947973.1|	-	0.074	13.4	7.2	0.085	13.2	5.0	1.1	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF883)
Phage_Gp111	PF07410.6	gi|568164446|ref|YP_008947973.1|	-	0.56	10.3	8.8	0.59	10.2	6.1	1.1	1	0	0	1	1	1	0	Streptococcus	thermophilus	bacteriophage	Gp111	protein
ATP-synt_B	PF00430.13	gi|568164446|ref|YP_008947973.1|	-	0.8	9.5	13.1	0.93	9.3	9.1	1.1	1	0	0	1	1	1	0	ATP	synthase	B/B'	CF(0)
Dak2	PF02734.12	gi|568164446|ref|YP_008947973.1|	-	1.3	8.6	7.0	1.3	8.6	4.8	1.0	1	0	0	1	1	1	0	DAK2	domain
YtxH	PF12732.2	gi|568164446|ref|YP_008947973.1|	-	1.8	9.0	12.6	2.8	8.3	8.8	1.4	1	1	0	1	1	1	0	YtxH-like	protein
ProQ	PF04352.8	gi|568164446|ref|YP_008947973.1|	-	4.1	7.0	8.1	4.3	6.9	5.3	1.4	1	1	0	1	1	1	0	ProQ/FINO	family
DUF4352	PF11611.3	gi|568164964|ref|YP_008947974.1|	-	4e-11	43.1	10.5	2.4e-05	24.4	0.1	4.0	4	0	0	4	4	4	2	Domain	of	unknown	function	(DUF4352)
DUF2324	PF10086.4	gi|568164965|ref|YP_008947975.1|	-	0.031	13.4	7.2	2.5	7.2	5.0	2.1	1	1	0	1	1	1	0	Putative	membrane	peptidase	family	(DUF2324)
p450	PF00067.17	gi|568164447|ref|YP_008947977.1|	-	3.8e-22	78.4	0.1	3.2e-18	65.5	0.0	3.0	2	1	1	3	3	3	3	Cytochrome	P450
DUF973	PF06157.6	gi|568164448|ref|YP_008947978.1|	-	3.5e-64	216.5	39.4	7.3e-64	215.4	27.3	1.5	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
DUF996	PF06195.8	gi|568164448|ref|YP_008947978.1|	-	1.3e-06	28.4	24.2	4.4e-05	23.5	13.9	2.7	2	1	1	3	3	3	3	Protein	of	unknown	function	(DUF996)
Isochorismatase	PF00857.15	gi|568164449|ref|YP_008947979.1|	-	2.3e-29	102.5	0.0	2.7e-29	102.2	0.0	1.1	1	0	0	1	1	1	1	Isochorismatase	family
Soyouz_module	PF14313.1	gi|568164449|ref|YP_008947979.1|	-	0.036	13.6	0.1	0.12	11.9	0.0	1.8	2	0	0	2	2	2	0	N-terminal	region	of	Paramyxovirinae	phosphoprotein	(P)
DUF840	PF05801.6	gi|568164449|ref|YP_008947979.1|	-	0.042	13.9	0.1	6.6	6.8	0.0	2.3	2	0	0	2	2	2	0	Lagovirus	protein	of	unknown	function	(DUF840)
AP_endonuc_2	PF01261.19	gi|568164449|ref|YP_008947979.1|	-	0.12	11.6	0.0	0.27	10.4	0.0	1.5	2	0	0	2	2	2	0	Xylose	isomerase-like	TIM	barrel
MFS_1	PF07690.11	gi|568164450|ref|YP_008947980.1|	-	8.2e-60	202.3	53.6	2.5e-58	197.4	32.3	2.0	2	0	0	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|568164450|ref|YP_008947980.1|	-	1.2e-08	34.0	41.5	3.6e-07	29.1	11.9	2.8	3	0	0	3	3	3	2	Sugar	(and	other)	transporter
MFS_3	PF05977.8	gi|568164450|ref|YP_008947980.1|	-	0.0001	20.6	9.7	0.0001	20.6	6.7	2.2	2	0	0	2	2	2	2	Transmembrane	secretion	effector
DUF456	PF04306.8	gi|568164451|ref|YP_008947982.1|	-	0.1	12.6	3.2	0.11	12.5	2.2	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF456)
TarH	PF02203.10	gi|568164451|ref|YP_008947982.1|	-	0.26	11.1	5.9	0.28	11.0	4.1	1.2	1	0	0	1	1	1	0	Tar	ligand	binding	domain	homologue
DUF1469	PF07332.6	gi|568164451|ref|YP_008947982.1|	-	0.29	10.8	2.2	0.35	10.5	1.6	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1469)
AGTRAP	PF06396.6	gi|568164451|ref|YP_008947982.1|	-	1.2	8.8	4.7	1.3	8.6	3.3	1.0	1	0	0	1	1	1	0	Angiotensin	II,	type	I	receptor-associated	protein	(AGTRAP)
Claudin_2	PF13903.1	gi|568164451|ref|YP_008947982.1|	-	1.4	8.5	5.3	1.8	8.2	3.7	1.1	1	0	0	1	1	1	0	PMP-22/EMP/MP20/Claudin	tight	junction
Clc-like	PF07062.7	gi|568164451|ref|YP_008947982.1|	-	1.8	7.7	6.4	2.1	7.5	4.5	1.0	1	0	0	1	1	1	0	Clc-like
DUF805	PF05656.9	gi|568164451|ref|YP_008947982.1|	-	1.9	8.3	5.6	2.3	8.0	3.9	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF805)
SdpI	PF13630.1	gi|568164451|ref|YP_008947982.1|	-	2	8.1	10.2	2.6	7.7	7.1	1.1	1	0	0	1	1	1	0	SdpI/YhfL	protein	family
DUF4231	PF14015.1	gi|568164451|ref|YP_008947982.1|	-	2.2	8.2	5.0	2.3	8.2	3.5	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4231)
DUF485	PF04341.7	gi|568164451|ref|YP_008947982.1|	-	2.4	7.9	4.9	3.1	7.5	3.4	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF485
SecE	PF00584.15	gi|568164451|ref|YP_008947982.1|	-	4.9	6.7	9.3	2.6	7.6	2.4	2.1	2	0	0	2	2	2	0	SecE/Sec61-gamma	subunits	of	protein	translocation	complex
DUF2768	PF10966.3	gi|568164451|ref|YP_008947982.1|	-	5.2	7.2	8.9	8.1	6.6	6.2	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2768)
ATP1G1_PLM_MAT8	PF02038.11	gi|568164452|ref|YP_008947983.1|	-	0.46	9.5	3.2	0.63	9.0	2.2	1.3	1	0	0	1	1	1	0	ATP1G1/PLM/MAT8	family
DUF2273	PF10031.4	gi|568164452|ref|YP_008947983.1|	-	1.3	8.7	5.4	0.15	11.7	1.3	1.4	2	0	0	2	2	2	0	Small	integral	membrane	protein	(DUF2273)
DUF3951	PF13131.1	gi|568164452|ref|YP_008947983.1|	-	2.6	7.8	5.3	4.7	7.0	3.6	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3951)
Cytochrom_B_N_2	PF13631.1	gi|568164453|ref|YP_008947984.1|	-	3.3e-54	183.1	6.4	3.3e-54	183.1	4.4	3.9	3	2	2	5	5	5	1	Cytochrome	b(N-terminal)/b6/petB
Cytochrom_B_C	PF00032.12	gi|568164453|ref|YP_008947984.1|	-	0.0096	16.1	3.2	0.0096	16.1	2.2	4.5	4	2	2	6	6	6	1	Cytochrome	b(C-terminal)/b6/petD
COX1	PF00115.15	gi|568164454|ref|YP_008947985.1|	-	3.6e-73	246.7	61.1	4.6e-73	246.3	42.3	1.0	1	0	0	1	1	1	1	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
PgaD	PF13994.1	gi|568164454|ref|YP_008947985.1|	-	0.0034	16.8	0.8	0.0034	16.8	0.5	3.0	1	1	0	2	2	2	1	PgaD-like	protein
COX2	PF00116.15	gi|568164455|ref|YP_008947986.1|	-	4.3e-05	23.3	0.0	6.5e-05	22.7	0.0	1.3	1	0	0	1	1	1	1	Cytochrome	C	oxidase	subunit	II,	periplasmic	domain
DUF843	PF05814.6	gi|568164455|ref|YP_008947986.1|	-	0.073	12.8	0.4	0.15	11.8	0.3	1.5	1	0	0	1	1	1	0	Baculovirus	protein	of	unknown	function	(DUF843)
Rieske	PF00355.21	gi|568164456|ref|YP_008947987.1|	-	1.5e-11	43.6	0.6	3.5e-11	42.5	0.4	1.5	1	1	0	1	1	1	1	Rieske	[2Fe-2S]	domain
UCR_Fe-S_N	PF10399.4	gi|568164456|ref|YP_008947987.1|	-	0.13	11.4	0.1	0.33	10.1	0.0	1.7	1	0	0	1	1	1	0	Ubiquitinol-cytochrome	C	reductase	Fe-S	subunit	TAT	signal
OAD_gamma	PF04277.8	gi|568164457|ref|YP_008947988.1|	-	0.06	13.7	0.7	0.21	11.9	0.5	2.0	1	0	0	1	1	1	0	Oxaloacetate	decarboxylase,	gamma	chain
DUF1469	PF07332.6	gi|568164458|ref|YP_008947989.1|	-	0.03	14.0	5.9	0.062	13.0	4.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1469)
SpoA	PF01052.15	gi|568164459|ref|YP_008947990.1|	-	0.055	13.0	0.0	0.12	12.0	0.0	1.5	1	0	0	1	1	1	0	Surface	presentation	of	antigens	(SPOA)
Neurensin	PF14927.1	gi|568164459|ref|YP_008947990.1|	-	0.12	11.7	0.3	0.21	10.9	0.2	1.4	1	0	0	1	1	1	0	Neurensin
DUF4064	PF13273.1	gi|568164459|ref|YP_008947990.1|	-	0.9	9.6	15.1	0.74	9.9	1.9	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4064)
DUF1772	PF08592.6	gi|568164459|ref|YP_008947990.1|	-	5.9	6.6	6.9	16	5.2	2.6	2.3	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF1772)
Nramp	PF01566.13	gi|568164460|ref|YP_008947991.1|	-	4.7e-39	134.1	18.7	5.8e-39	133.8	13.0	1.1	1	0	0	1	1	1	1	Natural	resistance-associated	macrophage	protein
Sugar_tr	PF00083.19	gi|568164461|ref|YP_008947992.1|	-	1.5e-50	172.0	21.6	1.8e-50	171.8	15.0	1.0	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|568164461|ref|YP_008947992.1|	-	2.8e-23	82.1	32.6	2.8e-23	82.1	22.6	1.9	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
DUF1129	PF06570.6	gi|568164461|ref|YP_008947992.1|	-	0.011	15.1	0.6	0.011	15.1	0.4	2.6	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1129)
ydhR	PF08803.6	gi|568164461|ref|YP_008947992.1|	-	0.075	13.1	0.0	0.13	12.3	0.0	1.3	1	0	0	1	1	1	0	Putative	mono-oxygenase	ydhR
SoxE	PF06525.6	gi|568164462|ref|YP_008947993.1|	-	5.6e-60	201.9	10.2	6.3e-60	201.8	7.0	1.0	1	0	0	1	1	1	1	Sulfocyanin	(SoxE)
Cupredoxin_1	PF13473.1	gi|568164462|ref|YP_008947993.1|	-	0.027	14.3	0.0	1.7	8.5	0.0	2.1	2	0	0	2	2	2	0	Cupredoxin-like	domain
MFS_1	PF07690.11	gi|568164463|ref|YP_008947995.1|	-	2.2e-20	72.7	43.6	2.9e-15	55.8	13.7	2.0	2	0	0	2	2	2	2	Major	Facilitator	Superfamily
MFS_3	PF05977.8	gi|568164463|ref|YP_008947995.1|	-	0.0011	17.1	0.5	0.0011	17.1	0.4	1.5	2	0	0	2	2	2	1	Transmembrane	secretion	effector
DUF4231	PF14015.1	gi|568164463|ref|YP_008947995.1|	-	0.2	11.6	0.1	0.2	11.6	0.1	3.2	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF4231)
DUF2542	PF10808.3	gi|568164463|ref|YP_008947995.1|	-	0.6	10.4	0.0	0.6	10.4	0.0	3.7	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF2542)
Fer4_10	PF13237.1	gi|568164464|ref|YP_008947996.1|	-	6.6e-08	32.2	5.0	1.1e-07	31.5	3.5	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|568164464|ref|YP_008947996.1|	-	4.4e-06	26.8	7.3	7.8e-06	26.0	4.4	1.9	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|568164464|ref|YP_008947996.1|	-	5.7e-05	23.4	16.0	0.00079	19.7	6.5	2.4	2	1	2	4	4	3	3	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|568164464|ref|YP_008947996.1|	-	0.00084	19.3	4.8	0.021	14.8	4.0	2.5	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|568164464|ref|YP_008947996.1|	-	0.0023	17.7	10.9	0.23	11.3	1.3	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_2	PF12797.2	gi|568164464|ref|YP_008947996.1|	-	0.0046	16.7	7.8	0.51	10.3	1.6	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|568164464|ref|YP_008947996.1|	-	0.0066	17.1	2.2	0.39	11.4	0.0	2.5	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Fer4_11	PF13247.1	gi|568164464|ref|YP_008947996.1|	-	0.0076	16.1	1.9	0.015	15.1	1.3	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|568164464|ref|YP_008947996.1|	-	0.012	15.4	5.0	0.027	14.3	3.5	1.6	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|568164464|ref|YP_008947996.1|	-	0.092	12.3	10.4	0.052	13.1	0.6	2.9	2	1	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|568164464|ref|YP_008947996.1|	-	0.11	12.8	7.5	11	6.4	5.3	2.6	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_20	PF14691.1	gi|568164464|ref|YP_008947996.1|	-	0.31	10.7	4.7	0.28	10.8	1.4	2.0	1	1	1	2	2	2	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_4	PF12800.2	gi|568164464|ref|YP_008947996.1|	-	0.34	11.3	7.1	2.6	8.6	1.2	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|568164464|ref|YP_008947996.1|	-	1.5	9.5	13.9	0.18	12.4	1.7	2.7	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Nitrate_red_del	PF02613.10	gi|568164466|ref|YP_008947998.1|	-	2.8e-09	36.9	0.0	7e-09	35.6	0.0	1.5	1	1	0	1	1	1	1	Nitrate	reductase	delta	subunit
Fer4_11	PF13247.1	gi|568164467|ref|YP_008947999.1|	-	2.5e-23	81.8	12.0	2.7e-23	81.6	6.0	2.1	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|568164467|ref|YP_008947999.1|	-	2.6e-13	49.9	23.5	1.4e-08	34.9	6.7	3.0	2	1	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|568164467|ref|YP_008947999.1|	-	4.2e-11	43.0	23.0	2.6e-05	24.5	5.6	2.9	2	1	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|568164467|ref|YP_008947999.1|	-	2.1e-09	37.0	21.7	1.9e-05	24.3	4.6	2.8	2	1	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|568164467|ref|YP_008947999.1|	-	8.2e-08	31.7	28.6	1.6e-05	24.5	1.3	4.6	5	0	0	5	5	5	3	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|568164467|ref|YP_008947999.1|	-	8.8e-06	25.6	32.7	0.00048	20.2	1.7	4.7	5	0	0	5	5	5	3	4Fe-4S	binding	domain
Fer4	PF00037.22	gi|568164467|ref|YP_008947999.1|	-	6.4e-05	22.3	3.5	6.4e-05	22.3	2.5	4.3	4	0	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|568164467|ref|YP_008947999.1|	-	0.00029	20.5	2.1	0.00029	20.5	1.5	5.0	5	0	0	5	5	5	2	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|568164467|ref|YP_008947999.1|	-	0.00056	19.8	22.5	0.0029	17.6	3.3	3.1	2	2	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|568164467|ref|YP_008947999.1|	-	0.0016	18.7	21.8	0.11	12.9	0.2	3.7	2	1	0	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|568164467|ref|YP_008947999.1|	-	0.019	15.4	39.7	0.31	11.6	2.5	4.3	4	0	0	4	4	4	0	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|568164467|ref|YP_008947999.1|	-	0.051	13.9	16.8	0.29	11.5	1.5	3.6	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|568164467|ref|YP_008947999.1|	-	0.11	12.3	24.2	0.4	10.5	0.2	3.7	3	1	1	4	4	4	0	4Fe-4S	dicluster	domain
Molybdopterin	PF00384.17	gi|568164468|ref|YP_008948000.1|	-	0.00027	19.8	0.0	0.74	8.4	0.0	2.9	3	0	0	3	3	3	2	Molybdopterin	oxidoreductase
TAT_signal	PF10518.4	gi|568164468|ref|YP_008948000.1|	-	0.0062	16.4	0.1	0.018	15.0	0.1	1.8	1	0	0	1	1	1	1	TAT	(twin-arginine	translocation)	pathway	signal	sequence
Molybdop_Fe4S4	PF04879.11	gi|568164468|ref|YP_008948000.1|	-	0.027	14.2	0.5	0.056	13.2	0.3	1.5	1	0	0	1	1	1	0	Molybdopterin	oxidoreductase	Fe4S4	domain
TrmB	PF01978.14	gi|568164469|ref|YP_008948001.1|	-	0.0019	17.8	0.0	0.0043	16.7	0.0	1.6	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HVSL	PF09749.4	gi|568164469|ref|YP_008948001.1|	-	0.041	12.8	0.0	0.058	12.4	0.0	1.3	1	0	0	1	1	1	0	Uncharacterised	conserved	protein
MarR_2	PF12802.2	gi|568164469|ref|YP_008948001.1|	-	0.044	13.4	0.0	0.12	12.1	0.0	1.7	2	0	0	2	2	2	0	MarR	family
HTH_36	PF13730.1	gi|568164469|ref|YP_008948001.1|	-	0.088	12.9	0.0	0.4	10.8	0.0	2.2	1	0	0	1	1	1	0	Helix-turn-helix	domain
DUF2999	PF11212.3	gi|568164969|ref|YP_008948002.1|	-	0.11	12.5	0.1	3.9	7.5	0.0	2.8	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2999)
TPR_11	PF13414.1	gi|568164470|ref|YP_008948003.1|	-	1.2e-26	92.1	8.8	4.2e-09	35.9	0.1	4.8	2	1	1	4	4	4	4	TPR	repeat
TPR_16	PF13432.1	gi|568164470|ref|YP_008948003.1|	-	1.2e-19	70.3	0.0	4.8e-06	27.0	0.0	4.1	4	0	0	4	4	4	3	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|568164470|ref|YP_008948003.1|	-	1.4e-19	68.3	14.3	0.009	15.8	0.1	7.1	6	1	1	7	7	7	5	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|568164470|ref|YP_008948003.1|	-	5e-17	61.9	3.4	8.8e-09	35.5	0.0	4.3	2	2	1	4	4	4	2	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|568164470|ref|YP_008948003.1|	-	4.3e-15	55.6	13.0	0.00021	21.3	0.4	4.1	2	1	2	4	4	4	4	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_14	PF13428.1	gi|568164470|ref|YP_008948003.1|	-	1.6e-13	49.9	0.1	0.016	15.8	0.1	5.8	3	1	3	6	6	6	4	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|568164470|ref|YP_008948003.1|	-	1.1e-11	43.6	17.4	0.055	13.2	0.1	7.1	4	2	3	7	7	7	4	Tetratricopeptide	repeat
TPR_9	PF13371.1	gi|568164470|ref|YP_008948003.1|	-	1.4e-11	44.0	0.1	1.4e-07	31.2	0.0	4.0	1	1	3	4	4	4	1	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|568164470|ref|YP_008948003.1|	-	1.7e-10	40.6	11.8	0.006	16.4	0.0	5.2	1	1	3	4	4	4	3	Tetratricopeptide	repeat
TPR_1	PF00515.23	gi|568164470|ref|YP_008948003.1|	-	3e-10	39.2	15.8	0.41	10.3	0.1	6.4	6	0	0	6	6	6	4	Tetratricopeptide	repeat
TPR_17	PF13431.1	gi|568164470|ref|YP_008948003.1|	-	1.1e-07	31.5	12.3	1.9	8.8	0.0	7.4	7	1	0	7	7	7	1	Tetratricopeptide	repeat
TPR_15	PF13429.1	gi|568164470|ref|YP_008948003.1|	-	4.3e-06	26.0	0.3	1.3	8.0	0.0	3.9	2	1	2	4	4	4	1	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|568164470|ref|YP_008948003.1|	-	1.2e-05	25.3	9.1	3.4	8.3	0.0	6.5	7	0	0	7	7	7	1	Tetratricopeptide	repeat
ChAPs	PF09295.5	gi|568164470|ref|YP_008948003.1|	-	3.8e-05	22.6	0.4	0.0052	15.6	0.0	2.2	1	1	1	2	2	2	1	ChAPs	(Chs5p-Arf1p-binding	proteins)
YfdX	PF10938.3	gi|568164470|ref|YP_008948003.1|	-	6.7e-05	22.5	0.2	4.8	6.8	0.0	4.1	3	1	0	3	3	3	1	YfdX	protein
NARP1	PF12569.3	gi|568164470|ref|YP_008948003.1|	-	8.4e-05	21.5	2.4	0.0035	16.1	0.4	2.8	1	1	2	3	3	3	2	NMDA	receptor-regulated	protein	1
TPR_20	PF14561.1	gi|568164470|ref|YP_008948003.1|	-	0.00013	21.9	0.3	3.1	7.9	0.0	4.2	3	1	3	6	6	6	1	Tetratricopeptide	repeat
SHNi-TPR	PF10516.4	gi|568164470|ref|YP_008948003.1|	-	0.00014	21.0	0.9	8.5	5.7	0.0	4.7	4	1	1	5	5	5	0	SHNi-TPR
DUF4249	PF14054.1	gi|568164470|ref|YP_008948003.1|	-	0.0044	16.4	0.0	0.0066	15.8	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4249)
FAT	PF02259.18	gi|568164470|ref|YP_008948003.1|	-	0.0077	15.2	0.1	0.014	14.3	0.1	1.4	1	1	0	1	1	1	1	FAT	domain
TPR_21	PF09976.4	gi|568164470|ref|YP_008948003.1|	-	0.0089	15.9	0.0	1.8	8.5	0.0	3.0	1	1	2	3	3	3	1	Tetratricopeptide	repeat
DUF3856	PF12968.2	gi|568164470|ref|YP_008948003.1|	-	0.012	15.4	0.4	0.55	10.0	0.0	2.8	3	0	0	3	3	2	0	Domain	of	Unknown	Function	(DUF3856)
Alkyl_sulf_dimr	PF14863.1	gi|568164470|ref|YP_008948003.1|	-	0.013	15.6	0.1	0.2	11.9	0.0	2.5	3	0	0	3	3	2	0	Alkyl	sulfatase	dimerisation
TPR_7	PF13176.1	gi|568164470|ref|YP_008948003.1|	-	0.014	15.1	1.1	12	6.0	0.0	4.4	5	0	0	5	5	4	0	Tetratricopeptide	repeat
DUF627	PF04781.7	gi|568164470|ref|YP_008948003.1|	-	0.032	13.8	0.2	15	5.2	0.1	3.4	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF627)
MIT	PF04212.13	gi|568164470|ref|YP_008948003.1|	-	0.047	13.5	3.9	3.4	7.6	0.0	4.6	5	1	0	5	5	4	0	MIT	(microtubule	interacting	and	transport)	domain
Fis1_TPR_C	PF14853.1	gi|568164470|ref|YP_008948003.1|	-	0.87	9.5	9.1	3.7	7.4	0.1	4.3	3	1	2	5	5	5	0	Fis1	C-terminal	tetratricopeptide	repeat
Fer4_7	PF12838.2	gi|568164471|ref|YP_008948004.1|	-	2.3e-10	40.7	13.3	0.00041	20.6	0.4	3.6	3	1	0	3	3	3	3	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|568164471|ref|YP_008948004.1|	-	1.1e-08	34.3	29.1	5.4e-05	22.6	2.9	4.6	5	0	0	5	5	5	3	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|568164471|ref|YP_008948004.1|	-	1.7e-07	31.4	11.9	0.0023	18.1	2.3	3.7	3	1	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|568164471|ref|YP_008948004.1|	-	2.9e-07	30.1	16.7	3.1e-05	23.6	5.1	3.6	2	1	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|568164471|ref|YP_008948004.1|	-	4e-07	29.8	11.2	1.1e-06	28.4	3.4	2.8	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|568164471|ref|YP_008948004.1|	-	7.5e-06	25.5	25.4	0.0014	18.4	2.1	4.6	5	0	0	5	5	5	3	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|568164471|ref|YP_008948004.1|	-	2.2e-05	24.1	32.5	0.001	18.8	3.4	4.2	5	0	0	5	5	4	3	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|568164471|ref|YP_008948004.1|	-	0.00017	21.5	15.8	0.00028	20.8	4.5	3.1	2	1	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|568164471|ref|YP_008948004.1|	-	0.003	18.0	13.2	0.045	14.3	5.2	3.4	2	1	0	2	2	2	1	4Fe-4S	single	cluster	domain
CRAL_TRIO	PF00650.15	gi|568164471|ref|YP_008948004.1|	-	0.026	14.0	0.0	0.063	12.7	0.0	1.6	1	0	0	1	1	1	0	CRAL/TRIO	domain
Fer4_17	PF13534.1	gi|568164471|ref|YP_008948004.1|	-	0.031	14.6	17.3	0.8	10.0	0.8	4.3	2	1	2	4	4	4	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|568164471|ref|YP_008948004.1|	-	0.04	14.3	0.4	0.04	14.3	0.3	3.3	2	1	1	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|568164471|ref|YP_008948004.1|	-	0.32	11.7	15.0	0.29	11.8	1.1	3.7	4	1	0	4	4	3	0	4Fe-4S	double	cluster	binding	domain
Fer4_13	PF13370.1	gi|568164471|ref|YP_008948004.1|	-	0.65	10.4	13.3	13	6.2	0.3	3.4	2	1	0	2	2	2	0	4Fe-4S	single	cluster	domain
HAD_2	PF13419.1	gi|568164970|ref|YP_008948005.1|	-	2.3e-08	34.4	0.0	3.1e-08	34.0	0.0	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
DUF2299	PF10061.4	gi|568164472|ref|YP_008948006.1|	-	1.2e-39	134.9	1.1	1.4e-39	134.7	0.7	1.1	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2299)
Amidoligase_2	PF12224.3	gi|568164472|ref|YP_008948006.1|	-	0.083	12.4	0.0	0.085	12.4	0.0	1.1	1	0	0	1	1	1	0	Putative	amidoligase	enzyme
NrfD	PF03916.9	gi|568164473|ref|YP_008948007.1|	-	2.2e-13	50.2	27.9	8.1e-13	48.4	16.3	2.2	2	0	0	2	2	2	2	Polysulphide	reductase,	NrfD
DmsC	PF04976.7	gi|568164473|ref|YP_008948007.1|	-	0.0015	17.8	14.7	0.0015	17.8	10.2	1.8	2	1	0	2	2	2	1	DMSO	reductase	anchor	subunit	(DmsC)
MFS_1	PF07690.11	gi|568164474|ref|YP_008948008.1|	-	4.7e-16	58.4	38.0	4.7e-16	58.4	26.3	1.4	1	1	0	1	1	1	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|568164474|ref|YP_008948008.1|	-	2.8e-13	49.2	30.1	4.4e-13	48.6	20.9	1.3	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
ISK_Channel	PF02060.10	gi|568164474|ref|YP_008948008.1|	-	0.022	14.3	1.1	0.042	13.4	0.0	2.0	2	0	0	2	2	2	0	Slow	voltage-gated	potassium	channel
MFS_1	PF07690.11	gi|568164475|ref|YP_008948009.1|	-	9.1e-43	146.3	66.1	2e-28	99.1	12.2	3.4	1	1	1	3	3	3	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|568164475|ref|YP_008948009.1|	-	2.6e-06	26.3	13.1	2.6e-06	26.3	9.1	3.3	3	0	0	3	3	3	2	Sugar	(and	other)	transporter
MFS_3	PF05977.8	gi|568164475|ref|YP_008948009.1|	-	1.4e-05	23.4	1.0	1.4e-05	23.4	0.7	2.1	2	0	0	2	2	2	1	Transmembrane	secretion	effector
PUCC	PF03209.10	gi|568164475|ref|YP_008948009.1|	-	8.7e-05	21.3	4.0	8.7e-05	21.3	2.8	2.8	3	1	0	3	3	3	1	PUCC	protein
PagP	PF07017.6	gi|568164475|ref|YP_008948009.1|	-	0.091	12.0	0.1	0.25	10.6	0.1	1.7	1	0	0	1	1	1	0	Antimicrobial	peptide	resistance	and	lipid	A	acylation	protein	PagP
DUF2583	PF10762.4	gi|568164475|ref|YP_008948009.1|	-	4.4	7.5	18.4	0.31	11.2	0.3	4.3	4	1	1	5	5	5	0	Protein	of	unknown	function	(DUF2583)
MarR	PF01047.17	gi|568164476|ref|YP_008948010.1|	-	1.6e-11	43.7	0.1	3.1e-11	42.8	0.0	1.6	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.2	gi|568164476|ref|YP_008948010.1|	-	7.4e-09	35.1	0.1	1.2e-08	34.5	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.1	gi|568164476|ref|YP_008948010.1|	-	8.3e-09	35.6	0.1	1.4e-08	34.8	0.1	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_34	PF13601.1	gi|568164476|ref|YP_008948010.1|	-	0.00017	21.5	0.3	0.00063	19.7	0.0	2.0	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|568164476|ref|YP_008948010.1|	-	0.00055	19.5	0.2	0.001	18.7	0.1	1.7	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HxlR	PF01638.12	gi|568164476|ref|YP_008948010.1|	-	0.00065	19.2	0.2	0.0014	18.2	0.1	1.6	1	1	0	1	1	1	1	HxlR-like	helix-turn-helix
Fe_dep_repress	PF01325.14	gi|568164476|ref|YP_008948010.1|	-	0.0078	16.1	0.0	0.019	14.8	0.0	1.7	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
DUF4423	PF14394.1	gi|568164476|ref|YP_008948010.1|	-	0.021	14.3	0.2	0.28	10.7	0.0	2.2	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4423)
HTH_20	PF12840.2	gi|568164476|ref|YP_008948010.1|	-	0.021	14.5	0.0	0.056	13.2	0.0	1.7	2	0	0	2	2	2	0	Helix-turn-helix	domain
Cdc6_C	PF09079.6	gi|568164476|ref|YP_008948010.1|	-	0.025	14.2	0.6	0.53	10.0	0.1	2.3	1	1	1	2	2	2	0	CDC6,	C	terminal
HTH_45	PF14947.1	gi|568164476|ref|YP_008948010.1|	-	0.032	14.0	0.4	0.1	12.3	0.1	2.0	1	1	1	2	2	2	0	Winged	helix-turn-helix
HTH_24	PF13412.1	gi|568164476|ref|YP_008948010.1|	-	0.049	13.0	0.1	0.26	10.7	0.0	2.3	2	1	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
PadR	PF03551.9	gi|568164476|ref|YP_008948010.1|	-	0.052	13.3	0.2	0.11	12.2	0.0	1.7	2	0	0	2	2	2	0	Transcriptional	regulator	PadR-like	family
DUF2250	PF10007.4	gi|568164476|ref|YP_008948010.1|	-	0.053	13.4	0.4	0.25	11.2	0.0	2.3	1	1	2	3	3	3	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
MFS_1	PF07690.11	gi|568164971|ref|YP_008948011.1|	-	1.3e-49	168.8	41.4	1.6e-31	109.3	14.1	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_2	PF13347.1	gi|568164971|ref|YP_008948011.1|	-	1e-08	34.0	26.8	3.8e-05	22.2	1.2	2.3	2	1	0	3	3	3	2	MFS/sugar	transport	protein
AgrB	PF04647.10	gi|568164971|ref|YP_008948011.1|	-	0.0017	17.4	0.6	0.0017	17.4	0.4	3.2	4	0	0	4	4	4	1	Accessory	gene	regulator	B
PIRT	PF15099.1	gi|568164971|ref|YP_008948011.1|	-	0.16	11.1	7.4	0.1	11.8	1.3	2.3	2	0	0	2	2	2	0	Phosphoinositide-interacting	protein	family
HTH_24	PF13412.1	gi|568164477|ref|YP_008948012.1|	-	4.3e-19	67.6	4.6	3.3e-13	48.7	0.4	2.3	2	0	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|568164477|ref|YP_008948012.1|	-	1.5e-12	46.8	0.6	6.3e-09	35.2	0.1	2.3	2	0	0	2	2	2	2	AsnC-type	helix-turn-helix	domain
MarR	PF01047.17	gi|568164477|ref|YP_008948012.1|	-	1.8e-06	27.5	0.0	0.0094	15.6	0.0	2.3	2	0	0	2	2	2	2	MarR	family
MarR_2	PF12802.2	gi|568164477|ref|YP_008948012.1|	-	9.8e-05	21.9	0.0	0.0026	17.3	0.0	2.1	2	0	0	2	2	2	1	MarR	family
TFIIE_alpha	PF02002.12	gi|568164477|ref|YP_008948012.1|	-	0.00036	20.0	2.0	0.15	11.5	0.1	2.9	3	0	0	3	3	3	2	TFIIE	alpha	subunit
TrmB	PF01978.14	gi|568164477|ref|YP_008948012.1|	-	0.00038	20.0	0.3	0.38	10.4	0.0	2.6	3	0	0	3	3	3	2	Sugar-specific	transcriptional	regulator	TrmB
HTH_5	PF01022.15	gi|568164477|ref|YP_008948012.1|	-	0.00068	19.2	0.0	0.66	9.6	0.0	2.5	2	0	0	2	2	2	2	Bacterial	regulatory	protein,	arsR	family
HTH_7	PF02796.10	gi|568164477|ref|YP_008948012.1|	-	0.011	15.5	0.0	2.7	7.9	0.0	2.6	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	resolvase
HTH_17	PF12728.2	gi|568164477|ref|YP_008948012.1|	-	0.016	15.4	0.1	2.7	8.3	0.0	2.6	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_Mga	PF08280.6	gi|568164477|ref|YP_008948012.1|	-	0.038	13.7	0.0	0.36	10.6	0.0	2.5	3	0	0	3	3	3	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_psq	PF05225.11	gi|568164477|ref|YP_008948012.1|	-	0.13	11.8	0.0	0.25	10.9	0.0	1.4	1	0	0	1	1	1	0	helix-turn-helix,	Psq	domain
HTH_Tnp_Tc3_2	PF01498.13	gi|568164478|ref|YP_008948013.1|	-	0.089	12.8	0.0	0.12	12.3	0.0	1.2	1	0	0	1	1	1	0	Transposase
HTH_10	PF04967.7	gi|568164479|ref|YP_008948014.1|	-	1.3e-19	69.5	0.3	4e-19	67.9	0.1	1.9	2	0	0	2	2	2	1	HTH	DNA	binding	domain
Sigma70_r4	PF04545.11	gi|568164479|ref|YP_008948014.1|	-	0.0002	20.5	0.0	0.00042	19.5	0.0	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
Ald_Xan_dh_C2	PF02738.13	gi|568164480|ref|YP_008948015.1|	-	3.5e-121	405.2	0.0	4.2e-121	404.9	0.0	1.0	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|568164480|ref|YP_008948015.1|	-	1.4e-15	57.2	0.7	1.2e-13	51.0	0.5	2.5	1	1	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
MFS_1	PF07690.11	gi|568164481|ref|YP_008948016.1|	-	5.4e-12	45.0	36.1	5.4e-12	45.0	25.0	1.4	1	1	0	1	1	1	1	Major	Facilitator	Superfamily
Reo_sigmaC	PF04582.7	gi|568164972|ref|YP_008948017.1|	-	2.8e-10	39.9	7.0	3.3e-06	26.5	0.5	2.1	1	1	1	2	2	2	2	Reovirus	sigma	C	capsid	protein
TMF_DNA_bd	PF12329.3	gi|568164972|ref|YP_008948017.1|	-	7.5e-06	25.6	40.7	0.0038	17.0	3.3	4.2	1	1	3	4	4	4	2	TATA	element	modulatory	factor	1	DNA	binding
MbeD_MobD	PF04899.7	gi|568164972|ref|YP_008948017.1|	-	8.8e-06	25.5	6.7	0.017	14.9	0.0	4.2	1	1	4	5	5	5	1	MbeD/MobD	like
Myosin_tail_1	PF01576.14	gi|568164972|ref|YP_008948017.1|	-	0.00021	19.2	31.2	0.00033	18.5	21.6	1.2	1	0	0	1	1	1	1	Myosin	tail
MCPsignal	PF00015.16	gi|568164972|ref|YP_008948017.1|	-	0.00047	19.7	18.9	0.0049	16.4	0.4	2.4	1	1	1	2	2	2	2	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
Acetyltransf_3	PF13302.1	gi|568164972|ref|YP_008948017.1|	-	0.00049	20.2	1.9	0.37	10.9	0.2	2.4	1	1	1	2	2	2	2	Acetyltransferase	(GNAT)	domain
DUF2336	PF10098.4	gi|568164972|ref|YP_008948017.1|	-	0.00096	18.4	5.8	0.0016	17.7	4.0	1.3	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2336)
Fib_alpha	PF08702.5	gi|568164972|ref|YP_008948017.1|	-	0.0013	18.8	22.3	0.15	12.2	7.0	2.6	1	1	1	2	2	2	2	Fibrinogen	alpha/beta	chain	family
Sigma70_r4	PF04545.11	gi|568164972|ref|YP_008948017.1|	-	0.0022	17.2	8.6	0.7	9.2	0.2	4.3	2	1	2	4	4	4	2	Sigma-70,	region	4
TelA	PF05816.6	gi|568164972|ref|YP_008948017.1|	-	0.0023	16.7	23.1	0.007	15.1	5.4	2.4	1	1	1	2	2	2	1	Toxic	anion	resistance	protein	(TelA)
ALIX_LYPXL_bnd	PF13949.1	gi|568164972|ref|YP_008948017.1|	-	0.0063	15.5	20.1	0.018	14.0	13.9	1.7	1	1	0	1	1	1	1	ALIX	V-shaped	domain	binding	to	HIV
DUF4200	PF13863.1	gi|568164972|ref|YP_008948017.1|	-	0.0065	16.4	35.3	0.37	10.7	12.1	2.5	1	1	1	2	2	2	2	Domain	of	unknown	function	(DUF4200)
Mt_ATP-synt_B	PF05405.9	gi|568164972|ref|YP_008948017.1|	-	0.0075	15.7	2.4	0.0075	15.7	1.6	2.4	1	1	0	2	2	2	1	Mitochondrial	ATP	synthase	B	chain	precursor	(ATP-synt_B)
HAUS-augmin3	PF14932.1	gi|568164972|ref|YP_008948017.1|	-	0.016	14.3	27.2	0.11	11.6	7.0	2.5	1	1	1	2	2	2	0	HAUS	augmin-like	complex	subunit	3
NOC3p	PF07540.6	gi|568164972|ref|YP_008948017.1|	-	0.019	15.2	18.7	0.82	9.9	0.4	4.7	2	1	3	5	5	4	0	Nucleolar	complex-associated	protein
TerB-N	PF13208.1	gi|568164972|ref|YP_008948017.1|	-	0.026	13.9	3.3	0.068	12.6	2.3	1.8	1	1	0	1	1	1	0	TerB-N
DUF763	PF05559.6	gi|568164972|ref|YP_008948017.1|	-	0.033	13.1	6.5	0.05	12.5	4.5	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF763)
AAA_13	PF13166.1	gi|568164972|ref|YP_008948017.1|	-	0.039	12.4	25.5	0.057	11.8	17.6	1.2	1	0	0	1	1	1	0	AAA	domain
Transposase_22	PF02994.9	gi|568164972|ref|YP_008948017.1|	-	0.048	12.1	32.4	0.016	13.6	11.1	2.3	1	1	1	2	2	2	0	L1	transposable	element
SPX	PF03105.14	gi|568164972|ref|YP_008948017.1|	-	0.07	12.9	17.7	0.092	12.5	12.3	1.1	1	0	0	1	1	1	0	SPX	domain
ARGLU	PF15346.1	gi|568164972|ref|YP_008948017.1|	-	0.089	12.5	38.7	0.27	10.9	10.8	2.3	1	1	1	2	2	2	0	Arginine	and	glutamate-rich	1
TMP_2	PF06791.8	gi|568164972|ref|YP_008948017.1|	-	0.099	12.2	11.8	3.5	7.1	5.0	3.1	1	1	2	3	3	3	0	Prophage	tail	length	tape	measure	protein
L27	PF02828.11	gi|568164972|ref|YP_008948017.1|	-	0.11	12.1	4.1	11	5.7	0.1	4.3	5	0	0	5	5	4	0	L27	domain
Vps39_1	PF10366.4	gi|568164972|ref|YP_008948017.1|	-	0.12	12.3	7.9	0.15	12.0	1.9	2.5	1	1	1	2	2	2	0	Vacuolar	sorting	protein	39	domain	1
Spc7	PF08317.6	gi|568164972|ref|YP_008948017.1|	-	0.15	10.6	30.5	1.6	7.3	21.1	2.1	1	1	0	1	1	1	0	Spc7	kinetochore	protein
TusA	PF01206.12	gi|568164972|ref|YP_008948017.1|	-	0.17	11.4	1.5	1	9.0	0.0	2.9	2	1	2	4	4	4	0	Sulfurtransferase	TusA
DUF4473	PF14747.1	gi|568164972|ref|YP_008948017.1|	-	0.18	12.0	19.3	0.36	11.0	0.3	3.6	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF4473)
NanE	PF04131.9	gi|568164972|ref|YP_008948017.1|	-	0.19	10.6	5.0	0.86	8.5	0.6	2.4	1	1	1	2	2	2	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
EzrA	PF06160.7	gi|568164972|ref|YP_008948017.1|	-	0.2	9.8	25.1	0.82	7.7	9.9	2.2	1	1	1	2	2	2	0	Septation	ring	formation	regulator,	EzrA
HOOK	PF05622.7	gi|568164972|ref|YP_008948017.1|	-	0.21	9.3	22.3	0.34	8.6	15.4	1.3	1	0	0	1	1	1	0	HOOK	protein
DUF148	PF02520.12	gi|568164972|ref|YP_008948017.1|	-	0.21	11.3	23.4	1.1	9.1	4.0	3.9	1	1	2	3	3	3	0	Domain	of	unknown	function	DUF148
TMPIT	PF07851.8	gi|568164972|ref|YP_008948017.1|	-	0.24	10.4	20.4	0.82	8.6	7.3	2.3	1	1	1	2	2	2	0	TMPIT-like	protein
Atg14	PF10186.4	gi|568164972|ref|YP_008948017.1|	-	0.29	10.0	27.5	0.68	8.8	11.0	2.1	1	1	1	2	2	2	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
DDE_Tnp_1	PF01609.16	gi|568164972|ref|YP_008948017.1|	-	0.39	10.2	4.3	2.8	7.4	3.1	2.1	1	1	0	1	1	1	0	Transposase	DDE	domain
DUF812	PF05667.6	gi|568164972|ref|YP_008948017.1|	-	0.42	9.0	23.5	0.56	8.6	16.3	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF812)
Atx10homo_assoc	PF09759.4	gi|568164972|ref|YP_008948017.1|	-	0.42	10.3	15.5	1.3	8.8	1.5	3.7	1	1	4	5	5	4	0	Spinocerebellar	ataxia	type	10	protein	domain
BLOC1_2	PF10046.4	gi|568164972|ref|YP_008948017.1|	-	0.43	10.7	24.5	0.05	13.7	7.4	3.1	1	1	2	3	3	3	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
CCDC155	PF14662.1	gi|568164972|ref|YP_008948017.1|	-	0.46	10.0	31.7	1.2	8.6	20.6	2.2	1	1	1	2	2	2	0	Coiled-coil	region	of	CCDC155
TPR_MLP1_2	PF07926.7	gi|568164972|ref|YP_008948017.1|	-	0.47	10.1	28.9	1.5	8.5	12.0	2.6	1	1	2	3	3	3	0	TPR/MLP1/MLP2-like	protein
ATG16	PF08614.6	gi|568164972|ref|YP_008948017.1|	-	0.53	10.0	28.3	1.1	9.0	8.4	2.5	1	1	1	2	2	2	0	Autophagy	protein	16	(ATG16)
Syntaxin_2	PF14523.1	gi|568164972|ref|YP_008948017.1|	-	0.8	9.7	24.6	10	6.2	6.5	3.9	1	1	1	2	2	2	0	Syntaxin-like	protein
Ada3	PF10198.4	gi|568164972|ref|YP_008948017.1|	-	0.89	9.3	24.9	3.6	7.3	1.1	4.5	1	1	3	4	4	4	0	Histone	acetyltransferases	subunit	3
DUF2935	PF11155.3	gi|568164972|ref|YP_008948017.1|	-	0.9	9.6	17.6	4.5e+03	-2.4	12.2	3.1	1	1	0	1	1	0	0	Domain	of	unknown	function	(DUF2935)
DUF3574	PF12098.3	gi|568164972|ref|YP_008948017.1|	-	0.98	9.0	10.2	8.3	6.0	1.0	3.3	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF3574)
HemX	PF04375.9	gi|568164972|ref|YP_008948017.1|	-	1	7.9	16.2	1.8	7.0	2.4	2.8	1	1	2	3	3	3	0	HemX
APG6	PF04111.7	gi|568164972|ref|YP_008948017.1|	-	1	8.3	28.8	1.6	7.7	11.3	2.2	1	1	1	2	2	2	0	Autophagy	protein	Apg6
COG2	PF06148.6	gi|568164972|ref|YP_008948017.1|	-	1.2	8.9	17.0	0.086	12.7	1.9	3.1	1	1	1	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
DUF1759	PF03564.10	gi|568164972|ref|YP_008948017.1|	-	1.6	8.5	17.6	4.2	7.1	0.5	3.3	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF1759)
DUF2584	PF10763.4	gi|568164972|ref|YP_008948017.1|	-	1.6	8.6	14.9	3.2	7.6	0.4	4.0	1	1	3	4	4	4	0	Protein	of	unknown	function	(DUF2584)
DUF1039	PF06287.6	gi|568164972|ref|YP_008948017.1|	-	1.8	8.5	8.8	60	3.6	0.1	4.2	4	0	0	4	4	4	0	Protein	of	unknown	function	(DUF1039)
CcdA	PF07362.7	gi|568164972|ref|YP_008948017.1|	-	1.8	8.4	15.6	31	4.5	0.3	4.6	1	1	3	4	4	4	0	Post-segregation	antitoxin	CcdA
YccJ	PF13993.1	gi|568164972|ref|YP_008948017.1|	-	2.1	8.4	10.0	36	4.5	0.3	3.8	1	1	3	4	4	4	0	YccJ-like	protein
Seryl_tRNA_N	PF02403.17	gi|568164972|ref|YP_008948017.1|	-	2.2	8.3	34.8	0.47	10.4	13.0	3.3	2	1	3	5	5	4	0	Seryl-tRNA	synthetase	N-terminal	domain
IncA	PF04156.9	gi|568164972|ref|YP_008948017.1|	-	3	7.3	25.0	4.6	6.7	8.3	2.2	1	1	1	2	2	2	0	IncA	protein
Mnd1	PF03962.10	gi|568164972|ref|YP_008948017.1|	-	3.1	7.4	27.0	1.1	8.8	11.6	2.3	1	1	1	2	2	2	0	Mnd1	family
Y_phosphatase3	PF13350.1	gi|568164972|ref|YP_008948017.1|	-	4	7.6	8.6	6.6	6.9	4.8	2.0	1	1	1	2	2	2	0	Tyrosine	phosphatase	family
AATF-Che1	PF13339.1	gi|568164972|ref|YP_008948017.1|	-	4	7.6	18.6	59	3.8	0.4	2.9	1	1	1	2	2	2	0	Apoptosis	antagonizing	transcription	factor
TC1	PF15063.1	gi|568164972|ref|YP_008948017.1|	-	4.5	6.9	15.3	19	4.8	0.4	4.0	1	1	5	6	6	6	0	Thyroid	cancer	protein	1
Med30	PF11315.3	gi|568164972|ref|YP_008948017.1|	-	4.7	7.3	20.4	2	8.5	7.1	2.4	1	1	1	2	2	2	0	Mediator	complex	subunit	30
DUF4201	PF13870.1	gi|568164972|ref|YP_008948017.1|	-	6	6.2	32.9	7.1	6.0	11.0	2.9	1	1	2	3	3	3	0	Domain	of	unknown	function	(DUF4201)
GAS	PF13851.1	gi|568164972|ref|YP_008948017.1|	-	7.8	5.6	33.9	9.8	5.3	9.6	2.4	1	1	1	2	2	2	0	Growth-arrest	specific	micro-tubule	binding
USP8_interact	PF08941.5	gi|568164972|ref|YP_008948017.1|	-	9	5.5	15.5	20	4.4	2.7	3.3	1	1	2	3	3	3	0	USP8	interacting
ABC_tran	PF00005.22	gi|568164482|ref|YP_008948018.1|	-	2.7e-29	102.2	0.0	4.7e-29	101.4	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|568164482|ref|YP_008948018.1|	-	6.5e-13	49.2	0.4	5.7e-12	46.1	0.3	2.0	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|568164482|ref|YP_008948018.1|	-	1.6e-07	30.8	2.3	9e-07	28.3	1.5	2.0	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|568164482|ref|YP_008948018.1|	-	3.4e-05	23.2	0.1	6.4e-05	22.3	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_10	PF12846.2	gi|568164482|ref|YP_008948018.1|	-	4.2e-05	23.1	0.1	0.12	11.8	0.0	2.1	2	0	0	2	2	2	2	AAA-like	domain
ABC_ATPase	PF09818.4	gi|568164482|ref|YP_008948018.1|	-	5e-05	22.0	1.0	0.024	13.2	0.0	2.7	2	1	0	2	2	2	2	Predicted	ATPase	of	the	ABC	class
AAA_15	PF13175.1	gi|568164482|ref|YP_008948018.1|	-	7.3e-05	21.9	0.8	0.0072	15.4	1.1	2.2	1	1	0	2	2	2	1	AAA	ATPase	domain
AAA_23	PF13476.1	gi|568164482|ref|YP_008948018.1|	-	9.1e-05	22.8	1.3	0.00045	20.6	0.9	2.0	1	1	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|568164482|ref|YP_008948018.1|	-	0.0015	17.7	0.1	0.0021	17.2	0.1	1.6	1	1	0	1	1	1	1	Protein	of	unknown	function,	DUF258
UPF0079	PF02367.12	gi|568164482|ref|YP_008948018.1|	-	0.0033	17.0	0.1	0.011	15.3	0.0	1.8	2	0	0	2	2	2	1	Uncharacterised	P-loop	hydrolase	UPF0079
Miro	PF08477.8	gi|568164482|ref|YP_008948018.1|	-	0.016	15.6	0.0	0.044	14.2	0.0	2.0	1	1	0	1	1	1	0	Miro-like	protein
AAA_16	PF13191.1	gi|568164482|ref|YP_008948018.1|	-	0.029	14.3	0.0	0.044	13.7	0.0	1.5	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA_30	PF13604.1	gi|568164482|ref|YP_008948018.1|	-	0.073	12.6	0.0	0.31	10.5	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
ATP-synt_ab	PF00006.20	gi|568164482|ref|YP_008948018.1|	-	0.13	11.7	0.0	0.32	10.4	0.0	1.6	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
MMR_HSR1	PF01926.18	gi|568164482|ref|YP_008948018.1|	-	0.2	11.5	1.4	0.47	10.4	0.9	1.9	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
BPD_transp_2	PF02653.11	gi|568164483|ref|YP_008948019.1|	-	2.6e-31	108.5	37.0	3.7e-31	108.0	25.6	1.2	1	0	0	1	1	1	1	Branched-chain	amino	acid	transport	system	/	permease	component
Cytochrom_B_C	PF00032.12	gi|568164483|ref|YP_008948019.1|	-	3.6	7.8	8.7	1.7	8.8	0.6	3.0	2	1	1	3	3	3	0	Cytochrome	b(C-terminal)/b6/petD
Peripla_BP_4	PF13407.1	gi|568164484|ref|YP_008948020.1|	-	9.4e-46	156.2	0.3	1.7e-45	155.4	0.2	1.3	1	0	0	1	1	1	1	Periplasmic	binding	protein	domain
Peripla_BP_1	PF00532.16	gi|568164484|ref|YP_008948020.1|	-	4e-05	22.9	0.0	7e-05	22.1	0.0	1.4	1	1	0	1	1	1	1	Periplasmic	binding	proteins	and	sugar	binding	domain	of	LacI	family
DUF1854	PF08909.6	gi|568164485|ref|YP_008948021.1|	-	2.4e-42	143.6	0.9	5.6e-42	142.4	0.2	2.0	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1854)
ABC_membrane	PF00664.18	gi|568164485|ref|YP_008948021.1|	-	1e-40	139.9	9.6	1.4e-40	139.4	6.7	1.2	1	0	0	1	1	1	1	ABC	transporter	transmembrane	region
ABC_tran	PF00005.22	gi|568164485|ref|YP_008948021.1|	-	1.4e-34	119.3	0.0	2.9e-34	118.2	0.0	1.6	1	0	0	1	1	1	1	ABC	transporter
SMC_N	PF02463.14	gi|568164485|ref|YP_008948021.1|	-	2.8e-06	26.7	0.3	0.001	18.3	0.0	2.5	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_17	PF13207.1	gi|568164485|ref|YP_008948021.1|	-	3.5e-05	24.6	0.9	0.00016	22.4	0.6	2.4	1	1	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|568164485|ref|YP_008948021.1|	-	3.5e-05	23.3	0.2	0.053	12.9	0.0	3.4	3	0	0	3	3	3	1	AAA-like	domain
ABC_membrane_3	PF13748.1	gi|568164485|ref|YP_008948021.1|	-	6.8e-05	22.0	4.1	6.8e-05	22.0	2.8	2.2	2	1	0	2	2	2	1	ABC	transporter	transmembrane	region
AAA_22	PF13401.1	gi|568164485|ref|YP_008948021.1|	-	0.00023	21.2	0.7	0.046	13.8	0.1	3.5	2	1	0	2	2	2	1	AAA	domain
AAA_18	PF13238.1	gi|568164485|ref|YP_008948021.1|	-	0.00049	20.3	0.2	0.0029	17.8	0.1	2.6	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|568164485|ref|YP_008948021.1|	-	0.0021	17.5	0.1	0.0058	16.1	0.1	1.7	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
DUF87	PF01935.12	gi|568164485|ref|YP_008948021.1|	-	0.0023	17.7	0.3	0.0082	15.9	0.1	2.1	2	0	0	2	2	1	1	Domain	of	unknown	function	DUF87
AAA	PF00004.24	gi|568164485|ref|YP_008948021.1|	-	0.0083	16.3	0.4	0.97	9.6	0.0	3.1	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
RNA_helicase	PF00910.17	gi|568164485|ref|YP_008948021.1|	-	0.025	14.7	1.1	0.46	10.6	0.0	2.6	2	1	0	2	2	2	0	RNA	helicase
DUF258	PF03193.11	gi|568164485|ref|YP_008948021.1|	-	0.029	13.5	0.0	0.058	12.5	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
FtsK_SpoIIIE	PF01580.13	gi|568164485|ref|YP_008948021.1|	-	0.052	13.0	0.0	0.12	11.8	0.0	1.5	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
AAA_25	PF13481.1	gi|568164485|ref|YP_008948021.1|	-	0.055	12.8	0.0	0.23	10.8	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
MMR_HSR1	PF01926.18	gi|568164485|ref|YP_008948021.1|	-	0.067	13.1	0.5	0.24	11.3	0.4	2.1	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_5	PF07728.9	gi|568164485|ref|YP_008948021.1|	-	0.07	12.8	0.0	0.45	10.2	0.0	2.4	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.1	gi|568164485|ref|YP_008948021.1|	-	0.078	12.9	0.2	0.26	11.2	0.1	2.0	1	1	0	1	1	1	0	AAA	ATPase	domain
MobB	PF03205.9	gi|568164485|ref|YP_008948021.1|	-	0.1	12.3	1.6	0.11	12.1	0.1	1.9	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_23	PF13476.1	gi|568164485|ref|YP_008948021.1|	-	0.14	12.4	0.1	0.14	12.4	0.0	2.8	3	0	0	3	3	3	0	AAA	domain
AAA_33	PF13671.1	gi|568164485|ref|YP_008948021.1|	-	0.15	11.9	0.0	0.4	10.5	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
Amidohydro_2	PF04909.9	gi|568164486|ref|YP_008948022.1|	-	2e-29	103.0	0.3	3.2e-29	102.3	0.2	1.3	1	1	0	1	1	1	1	Amidohydrolase
CARD	PF00619.16	gi|568164487|ref|YP_008948023.1|	-	0.0014	18.4	0.2	0.0019	17.9	0.1	1.2	1	0	0	1	1	1	1	Caspase	recruitment	domain
ADH_N	PF08240.7	gi|568164488|ref|YP_008948024.1|	-	1.7e-30	104.9	0.1	3.8e-30	103.8	0.1	1.6	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|568164488|ref|YP_008948024.1|	-	4.1e-28	97.5	0.2	6.7e-28	96.8	0.1	1.3	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|568164488|ref|YP_008948024.1|	-	2.1e-12	48.0	0.1	1.1e-11	45.7	0.0	1.9	2	0	0	2	2	2	1	Zinc-binding	dehydrogenase
TrkA_N	PF02254.13	gi|568164488|ref|YP_008948024.1|	-	0.00084	19.3	1.2	0.0017	18.3	0.8	1.5	1	0	0	1	1	1	1	TrkA-N	domain
Methyltransf_31	PF13847.1	gi|568164488|ref|YP_008948024.1|	-	0.0029	17.1	0.4	0.0055	16.3	0.3	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|568164488|ref|YP_008948024.1|	-	0.028	15.0	0.0	0.27	11.8	0.0	2.4	1	1	1	2	2	2	0	Methyltransferase	domain
Urocanase	PF01175.13	gi|568164488|ref|YP_008948024.1|	-	0.03	12.3	0.1	0.046	11.7	0.1	1.2	1	0	0	1	1	1	0	Urocanase
DapB_N	PF01113.15	gi|568164488|ref|YP_008948024.1|	-	0.038	13.9	1.1	0.072	13.0	0.7	1.4	1	0	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
UDPG_MGDP_dh_N	PF03721.9	gi|568164488|ref|YP_008948024.1|	-	0.15	11.4	1.9	0.16	11.3	0.6	1.6	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
MFS_1	PF07690.11	gi|568164489|ref|YP_008948025.1|	-	4.1e-23	81.6	43.2	6e-23	81.1	29.9	1.2	1	0	0	1	1	1	1	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|568164489|ref|YP_008948025.1|	-	1.9e-14	53.1	33.1	2.1e-08	33.2	4.5	2.8	1	1	2	3	3	3	2	Sugar	(and	other)	transporter
MFS_1_like	PF12832.2	gi|568164489|ref|YP_008948025.1|	-	0.0079	15.9	8.1	0.14	11.9	0.4	3.4	3	1	0	3	3	3	2	MFS_1	like	family
Peptidase_S58	PF03576.9	gi|568164490|ref|YP_008948027.1|	-	5.3e-27	94.8	2.2	8.9e-27	94.1	1.6	1.4	1	1	0	1	1	1	1	Peptidase	family	S58
MFS_1	PF07690.11	gi|568164491|ref|YP_008948028.1|	-	2.5e-20	72.4	74.1	8.7e-18	64.1	28.7	2.2	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|568164491|ref|YP_008948028.1|	-	2.8e-13	49.2	48.2	1.2e-12	47.1	10.8	2.1	1	1	1	2	2	2	2	Sugar	(and	other)	transporter
adh_short_C2	PF13561.1	gi|568164492|ref|YP_008948029.1|	-	5.6e-40	137.6	0.1	6.8e-40	137.3	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|568164492|ref|YP_008948029.1|	-	7.6e-31	107.2	0.0	1.1e-30	106.7	0.0	1.1	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|568164492|ref|YP_008948029.1|	-	3.5e-15	56.1	0.0	4.8e-15	55.6	0.0	1.1	1	0	0	1	1	1	1	KR	domain
DUF1776	PF08643.5	gi|568164492|ref|YP_008948029.1|	-	6.1e-05	22.3	0.0	9.1e-05	21.7	0.0	1.2	1	0	0	1	1	1	1	Fungal	family	of	unknown	function	(DUF1776)
3HCDH_N	PF02737.13	gi|568164492|ref|YP_008948029.1|	-	0.0002	21.0	0.0	0.00029	20.5	0.0	1.3	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Epimerase	PF01370.16	gi|568164492|ref|YP_008948029.1|	-	0.0038	16.6	0.4	0.018	14.5	0.2	1.9	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
THF_DHG_CYH_C	PF02882.14	gi|568164492|ref|YP_008948029.1|	-	0.0038	16.3	0.0	0.012	14.7	0.0	1.7	2	0	0	2	2	2	1	Tetrahydrofolate	dehydrogenase/cyclohydrolase,	NAD(P)-binding	domain
3Beta_HSD	PF01073.14	gi|568164492|ref|YP_008948029.1|	-	0.0044	15.7	0.1	0.0079	14.9	0.1	1.4	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
RrnaAD	PF00398.15	gi|568164492|ref|YP_008948029.1|	-	0.0091	15.0	0.0	0.014	14.4	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Eno-Rase_NADH_b	PF12242.3	gi|568164492|ref|YP_008948029.1|	-	0.013	15.2	0.1	0.026	14.2	0.0	1.4	1	0	0	1	1	1	0	NAD(P)H	binding	domain	of	trans-2-enoyl-CoA	reductase
Methyltransf_25	PF13649.1	gi|568164492|ref|YP_008948029.1|	-	0.033	14.5	0.0	0.054	13.8	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|568164492|ref|YP_008948029.1|	-	0.079	13.5	0.0	0.13	12.8	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
NAD_binding_10	PF13460.1	gi|568164492|ref|YP_008948029.1|	-	0.1	12.5	0.0	0.18	11.8	0.0	1.4	1	1	0	1	1	1	0	NADH(P)-binding
Peptidase_M20	PF01546.23	gi|568164493|ref|YP_008948030.1|	-	1.1e-32	113.0	0.0	1.6e-32	112.5	0.0	1.2	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|568164493|ref|YP_008948030.1|	-	1.8e-20	72.7	0.0	4.8e-20	71.3	0.0	1.8	2	0	0	2	2	2	1	Peptidase	dimerisation	domain
Peptidase_M28	PF04389.12	gi|568164493|ref|YP_008948030.1|	-	0.0088	15.7	0.0	0.11	12.2	0.0	2.1	2	0	0	2	2	2	1	Peptidase	family	M28
Peptidase_M20	PF01546.23	gi|568164494|ref|YP_008948031.1|	-	1.9e-28	99.2	0.0	2.4e-28	98.9	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|568164494|ref|YP_008948031.1|	-	2.6e-06	27.1	0.0	5.3e-06	26.1	0.0	1.6	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Peptidase_M28	PF04389.12	gi|568164494|ref|YP_008948031.1|	-	0.0016	18.2	0.0	0.003	17.3	0.0	1.5	1	0	0	1	1	1	1	Peptidase	family	M28
Peptidase_M42	PF05343.9	gi|568164494|ref|YP_008948031.1|	-	0.0058	15.4	0.1	1	8.0	0.0	2.3	2	0	0	2	2	2	2	M42	glutamyl	aminopeptidase
LsmAD	PF06741.8	gi|568164494|ref|YP_008948031.1|	-	0.092	12.8	1.9	0.22	11.6	1.3	1.6	1	0	0	1	1	1	0	LsmAD	domain
MFS_1	PF07690.11	gi|568164495|ref|YP_008948032.1|	-	4.6e-28	97.9	45.3	7.8e-28	97.1	31.4	1.3	1	0	0	1	1	1	1	Major	Facilitator	Superfamily
Arginase	PF00491.16	gi|568164496|ref|YP_008948033.1|	-	1.1e-76	257.7	0.0	1.3e-76	257.5	0.0	1.0	1	0	0	1	1	1	1	Arginase	family
UPF0489	PF12640.2	gi|568164496|ref|YP_008948033.1|	-	0.18	11.9	1.1	1	9.5	0.8	2.2	1	1	0	1	1	1	0	UPF0489	domain
Spc7	PF08317.6	gi|568164974|ref|YP_008948034.1|	-	0.026	13.1	9.5	0.0082	14.8	3.9	1.8	2	0	0	2	2	2	0	Spc7	kinetochore	protein
IncA	PF04156.9	gi|568164974|ref|YP_008948034.1|	-	0.39	10.2	2.9	0.68	9.4	2.0	1.5	1	0	0	1	1	1	0	IncA	protein
zf-C4H2	PF10146.4	gi|568164974|ref|YP_008948034.1|	-	1.2	9.0	5.7	0.26	11.2	1.3	1.7	2	1	0	2	2	2	0	Zinc	finger-containing	protein
Myosin_tail_1	PF01576.14	gi|568164974|ref|YP_008948034.1|	-	1.6	6.3	13.2	0.03	12.0	4.6	1.4	2	0	0	2	2	2	0	Myosin	tail
HTH_24	PF13412.1	gi|568164497|ref|YP_008948035.1|	-	3.3e-15	55.1	2.9	5e-15	54.6	2.0	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|568164497|ref|YP_008948035.1|	-	1.1e-13	50.5	0.4	1.6e-13	49.9	0.3	1.3	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
AsnC_trans_reg	PF01037.16	gi|568164497|ref|YP_008948035.1|	-	6.6e-12	44.9	0.0	1.1e-11	44.2	0.0	1.4	1	0	0	1	1	1	1	AsnC	family
HTH_20	PF12840.2	gi|568164497|ref|YP_008948035.1|	-	1.6e-05	24.5	0.0	2.7e-05	23.8	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR	PF01047.17	gi|568164497|ref|YP_008948035.1|	-	1.9e-05	24.2	0.1	3.9e-05	23.2	0.1	1.5	1	0	0	1	1	1	1	MarR	family
MarR_2	PF12802.2	gi|568164497|ref|YP_008948035.1|	-	0.00019	21.0	0.0	0.00033	20.2	0.0	1.3	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|568164497|ref|YP_008948035.1|	-	0.00043	19.9	0.2	0.00097	18.7	0.0	1.6	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_5	PF01022.15	gi|568164497|ref|YP_008948035.1|	-	0.00047	19.7	0.1	0.00088	18.8	0.1	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
DUF2250	PF10007.4	gi|568164497|ref|YP_008948035.1|	-	0.0012	18.7	1.6	0.014	15.2	0.2	2.4	2	1	1	3	3	3	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_27	PF13463.1	gi|568164497|ref|YP_008948035.1|	-	0.0022	18.2	0.0	0.0041	17.4	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_WhiA	PF02650.9	gi|568164497|ref|YP_008948035.1|	-	0.003	17.9	1.0	0.0048	17.2	0.2	1.7	2	0	0	2	2	2	1	WhiA	C-terminal	HTH	domain
DUF1759	PF03564.10	gi|568164497|ref|YP_008948035.1|	-	0.0036	17.1	0.9	0.0073	16.1	0.1	1.8	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1759)
DDRGK	PF09756.4	gi|568164497|ref|YP_008948035.1|	-	0.0063	15.9	0.1	0.011	15.2	0.1	1.3	1	0	0	1	1	1	1	DDRGK	domain
HTH_IclR	PF09339.5	gi|568164497|ref|YP_008948035.1|	-	0.012	15.2	0.0	0.018	14.5	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
TFIIE_alpha	PF02002.12	gi|568164497|ref|YP_008948035.1|	-	0.017	14.5	0.1	0.034	13.6	0.1	1.5	1	0	0	1	1	1	0	TFIIE	alpha	subunit
HTH_11	PF08279.7	gi|568164497|ref|YP_008948035.1|	-	0.022	14.4	0.3	0.022	14.4	0.2	1.8	2	0	0	2	2	2	0	HTH	domain
Sulfolobus_pRN	PF05584.6	gi|568164497|ref|YP_008948035.1|	-	0.058	13.3	0.4	0.13	12.1	0.1	1.6	2	0	0	2	2	2	0	Sulfolobus	plasmid	regulatory	protein
HTH_30	PF13556.1	gi|568164497|ref|YP_008948035.1|	-	0.06	12.9	0.0	0.097	12.2	0.0	1.3	1	0	0	1	1	1	0	PucR	C-terminal	helix-turn-helix	domain
HTH_8	PF02954.14	gi|568164497|ref|YP_008948035.1|	-	0.097	12.2	0.2	0.23	11.0	0.0	1.7	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	Fis	family
HTH_Crp_2	PF13545.1	gi|568164497|ref|YP_008948035.1|	-	0.1	12.3	0.0	0.18	11.6	0.0	1.4	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
FeoC	PF09012.5	gi|568164497|ref|YP_008948035.1|	-	0.11	12.2	0.5	0.86	9.3	0.1	2.0	2	0	0	2	2	2	0	FeoC	like	transcriptional	regulator
HTH_23	PF13384.1	gi|568164497|ref|YP_008948035.1|	-	0.12	12.0	0.0	0.22	11.2	0.0	1.3	1	0	0	1	1	1	0	Homeodomain-like	domain
Mga	PF05043.8	gi|568164497|ref|YP_008948035.1|	-	0.16	12.2	0.7	0.36	11.1	0.1	1.8	2	0	0	2	2	2	0	Mga	helix-turn-helix	domain
Aminotran_3	PF00202.16	gi|568164498|ref|YP_008948036.1|	-	4.9e-82	275.4	0.0	5.8e-82	275.2	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
EamA	PF00892.15	gi|568164499|ref|YP_008948037.1|	-	1.4e-30	105.8	27.3	1.2e-15	57.6	7.1	2.2	2	0	0	2	2	2	2	EamA-like	transporter	family
EmrE	PF13536.1	gi|568164499|ref|YP_008948037.1|	-	7.3e-06	26.1	23.2	0.0015	18.7	2.4	2.9	1	1	2	3	3	3	3	Multidrug	resistance	efflux	transporter
DUF2970	PF11174.3	gi|568164499|ref|YP_008948037.1|	-	0.12	11.9	0.1	0.12	11.9	0.1	3.3	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF2970)
Vpu	PF00558.14	gi|568164499|ref|YP_008948037.1|	-	0.37	10.3	0.0	0.37	10.3	0.0	2.2	2	1	0	2	2	2	0	Vpu	protein
TPT	PF03151.11	gi|568164499|ref|YP_008948037.1|	-	0.54	9.8	19.3	0.21	11.2	0.9	2.8	2	2	0	2	2	2	0	Triose-phosphate	Transporter	family
Hs1pro-1_C	PF07014.7	gi|568164500|ref|YP_008948038.1|	-	0.084	12.1	0.5	0.1	11.9	0.3	1.1	1	0	0	1	1	1	0	Hs1pro-1	protein	C-terminus
DUF356	PF04009.7	gi|568164500|ref|YP_008948038.1|	-	0.085	12.9	0.1	0.097	12.7	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF356)
DUF3090	PF11290.3	gi|568164500|ref|YP_008948038.1|	-	0.09	12.2	0.6	0.11	11.9	0.4	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3090)
DUF3067	PF11267.3	gi|568164500|ref|YP_008948038.1|	-	0.13	12.3	0.2	0.18	11.9	0.1	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3067)
PTE	PF02126.13	gi|568164501|ref|YP_008948039.1|	-	3.2e-85	285.8	0.0	3.7e-85	285.6	0.0	1.0	1	0	0	1	1	1	1	Phosphotriesterase	family
Gln-synt_C	PF00120.19	gi|568164502|ref|YP_008948040.1|	-	1.8e-77	260.0	0.0	2.7e-77	259.4	0.0	1.3	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.14	gi|568164502|ref|YP_008948040.1|	-	0.12	11.9	0.7	0.96	9.0	0.5	2.3	1	1	0	1	1	1	0	Glutamine	synthetase,	beta-Grasp	domain
Amidohydro_2	PF04909.9	gi|568164503|ref|YP_008948041.1|	-	3.9e-32	111.9	0.0	5.1e-32	111.5	0.0	1.2	1	0	0	1	1	1	1	Amidohydrolase
TatD_DNase	PF01026.16	gi|568164503|ref|YP_008948041.1|	-	0.00015	21.0	0.0	0.0002	20.6	0.0	1.3	1	0	0	1	1	1	1	TatD	related	DNase
HpaB_N	PF11794.3	gi|568164504|ref|YP_008948042.1|	-	7.6e-89	297.5	0.1	1.1e-88	297.1	0.1	1.2	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
HpaB	PF03241.8	gi|568164504|ref|YP_008948042.1|	-	6.5e-64	214.5	0.1	9.1e-64	214.0	0.1	1.2	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	C	terminal
Pyr_redox_2	PF07992.9	gi|568164505|ref|YP_008948043.1|	-	2e-20	73.5	0.2	3e-20	72.9	0.1	1.4	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|568164505|ref|YP_008948043.1|	-	1.2e-18	67.9	0.3	2.1e-12	47.5	0.0	3.0	2	1	1	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|568164505|ref|YP_008948043.1|	-	5.6e-12	45.9	0.1	1.4e-08	35.0	0.0	2.6	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
K_oxygenase	PF13434.1	gi|568164505|ref|YP_008948043.1|	-	1.8e-10	40.2	0.1	1.2e-07	31.0	0.0	3.0	2	1	1	3	3	3	1	L-lysine	6-monooxygenase	(NADPH-requiring)
HI0933_like	PF03486.9	gi|568164505|ref|YP_008948043.1|	-	4.9e-08	31.8	0.0	0.0011	17.5	0.0	3.4	4	0	0	4	4	4	2	HI0933-like	protein
NAD_binding_8	PF13450.1	gi|568164505|ref|YP_008948043.1|	-	4.7e-06	26.5	0.2	9.4e-05	22.3	0.0	2.5	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.12	gi|568164505|ref|YP_008948043.1|	-	3.5e-05	23.0	0.9	0.0072	15.4	0.0	3.7	3	1	0	4	4	4	1	Thi4	family
DAO	PF01266.19	gi|568164505|ref|YP_008948043.1|	-	0.00037	19.5	0.6	0.019	13.8	0.0	2.9	2	1	1	3	3	3	1	FAD	dependent	oxidoreductase
NAD_binding_7	PF13241.1	gi|568164505|ref|YP_008948043.1|	-	0.00039	20.6	0.3	0.0067	16.6	0.0	2.5	2	0	0	2	2	2	1	Putative	NAD(P)-binding
FAD_oxidored	PF12831.2	gi|568164505|ref|YP_008948043.1|	-	0.0015	17.6	0.1	0.0062	15.6	0.0	1.9	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
FMO-like	PF00743.14	gi|568164505|ref|YP_008948043.1|	-	0.0019	16.5	0.1	0.009	14.2	0.0	2.0	2	0	0	2	2	2	1	Flavin-binding	monooxygenase-like
NAD_binding_9	PF13454.1	gi|568164505|ref|YP_008948043.1|	-	0.0052	16.5	1.5	4.7	6.9	0.0	3.5	3	1	1	4	4	4	1	FAD-NAD(P)-binding
FAD_binding_2	PF00890.19	gi|568164505|ref|YP_008948043.1|	-	0.048	12.5	2.2	4.5	6.0	0.0	3.1	2	1	1	3	3	3	0	FAD	binding	domain
Lycopene_cycl	PF05834.7	gi|568164505|ref|YP_008948043.1|	-	0.063	12.1	0.0	4	6.2	0.1	2.8	2	1	1	3	3	3	0	Lycopene	cyclase	protein
Spermine_synth	PF01564.12	gi|568164505|ref|YP_008948043.1|	-	0.066	12.1	0.2	0.26	10.1	0.0	1.8	2	0	0	2	2	2	0	Spermine/spermidine	synthase
ADH_N	PF08240.7	gi|568164506|ref|YP_008948044.1|	-	5.3e-30	103.3	1.2	5.3e-30	103.3	0.8	1.9	2	0	0	2	2	2	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|568164506|ref|YP_008948044.1|	-	1.7e-28	98.7	0.1	3.5e-28	97.7	0.1	1.6	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|568164506|ref|YP_008948044.1|	-	0.00049	21.0	0.0	0.0032	18.3	0.0	2.1	2	0	0	2	2	2	1	Zinc-binding	dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|568164506|ref|YP_008948044.1|	-	0.03	13.4	0.2	0.056	12.5	0.1	1.4	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
ThiF	PF00899.16	gi|568164506|ref|YP_008948044.1|	-	0.099	12.4	4.8	0.24	11.2	3.3	1.6	1	0	0	1	1	1	0	ThiF	family
TrkA_N	PF02254.13	gi|568164506|ref|YP_008948044.1|	-	0.1	12.5	0.4	0.23	11.4	0.2	1.6	1	0	0	1	1	1	0	TrkA-N	domain
Shikimate_DH	PF01488.15	gi|568164506|ref|YP_008948044.1|	-	0.1	12.6	1.1	0.87	9.6	0.2	2.3	2	0	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
AMP-binding_C_2	PF14535.1	gi|568164507|ref|YP_008948045.1|	-	2.1e-15	56.5	0.0	3.9e-15	55.6	0.0	1.4	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
AMP-binding	PF00501.23	gi|568164507|ref|YP_008948045.1|	-	1.3e-06	27.0	0.1	2.4e-06	26.1	0.1	1.3	1	1	0	1	1	1	1	AMP-binding	enzyme
Glyco_transf_11	PF01531.11	gi|568164507|ref|YP_008948045.1|	-	0.069	12.1	0.0	0.12	11.3	0.0	1.2	1	0	0	1	1	1	0	Glycosyl	transferase	family	11
Semialdhyde_dh	PF01118.19	gi|568164508|ref|YP_008948046.1|	-	1.8e-30	105.7	0.0	3.3e-30	104.8	0.0	1.5	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Semialdhyde_dhC	PF02774.13	gi|568164508|ref|YP_008948046.1|	-	1.2e-21	77.3	0.0	2e-21	76.6	0.0	1.3	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
Gp_dh_C	PF02800.15	gi|568164508|ref|YP_008948046.1|	-	0.0046	16.4	0.0	0.014	14.8	0.0	1.8	2	0	0	2	2	2	1	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
DUF3638	PF12340.3	gi|568164508|ref|YP_008948046.1|	-	0.15	11.0	0.0	0.27	10.1	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3638)
AMP-binding	PF00501.23	gi|568164509|ref|YP_008948047.1|	-	1.8e-99	332.9	0.0	2.2e-99	332.7	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|568164509|ref|YP_008948047.1|	-	1.7e-16	60.8	0.1	7.7e-16	58.8	0.0	2.1	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
FAA_hydrolase	PF01557.13	gi|568164511|ref|YP_008948051.1|	-	4.9e-50	169.9	0.0	6.3e-50	169.6	0.0	1.1	1	0	0	1	1	1	1	Fumarylacetoacetate	(FAA)	hydrolase	family
Lactamase_B	PF00753.22	gi|568164512|ref|YP_008948052.1|	-	4.3e-26	91.7	0.5	6e-26	91.3	0.3	1.2	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|568164512|ref|YP_008948052.1|	-	0.0093	15.5	0.3	0.014	14.9	0.2	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
TauE	PF01925.14	gi|568164513|ref|YP_008948053.1|	-	1.8e-20	73.4	14.2	2.6e-20	72.9	9.9	1.2	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
UPF0154	PF03672.8	gi|568164513|ref|YP_008948053.1|	-	0.056	13.0	1.0	0.71	9.5	0.0	2.6	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0154)
DUF2207	PF09972.4	gi|568164513|ref|YP_008948053.1|	-	3.6	6.0	6.9	2.6	6.5	1.5	2.1	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2207)
FmdA_AmdA	PF03069.10	gi|568164514|ref|YP_008948054.1|	-	6.8e-65	219.1	0.0	3.1e-36	124.8	0.0	2.1	1	1	1	2	2	2	2	Acetamidase/Formamidase	family
Acetyltransf_1	PF00583.19	gi|568164515|ref|YP_008948055.1|	-	4.5e-17	61.8	0.0	5.9e-17	61.4	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|568164515|ref|YP_008948055.1|	-	5.8e-16	58.4	0.0	8.1e-16	57.9	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|568164515|ref|YP_008948055.1|	-	7.2e-14	52.0	0.1	8.7e-14	51.7	0.0	1.0	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|568164515|ref|YP_008948055.1|	-	8.8e-14	51.6	0.0	9.5e-14	51.5	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|568164515|ref|YP_008948055.1|	-	9.2e-11	41.6	0.0	1.3e-10	41.2	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|568164515|ref|YP_008948055.1|	-	2.3e-07	30.4	0.0	4.3e-07	29.6	0.0	1.3	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_3	PF13302.1	gi|568164515|ref|YP_008948055.1|	-	3.8e-06	27.1	0.0	4.4e-06	26.9	0.0	1.0	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.1	gi|568164515|ref|YP_008948055.1|	-	6e-06	26.2	0.0	6.9e-06	26.0	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
DUF3749	PF12568.3	gi|568164515|ref|YP_008948055.1|	-	0.00098	18.7	0.0	0.0011	18.5	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Mec-17	PF05301.6	gi|568164515|ref|YP_008948055.1|	-	0.0026	17.6	0.0	0.0075	16.2	0.0	1.8	2	0	0	2	2	2	1	Touch	receptor	neuron	protein	Mec-17
Acetyltransf_CG	PF14542.1	gi|568164515|ref|YP_008948055.1|	-	0.029	14.2	0.0	0.046	13.6	0.0	1.3	1	0	0	1	1	1	0	GCN5-related	N-acetyl-transferase
Malic_M	PF03949.10	gi|568164516|ref|YP_008948056.1|	-	3.2e-65	220.2	0.5	4e-65	219.9	0.3	1.1	1	0	0	1	1	1	1	Malic	enzyme,	NAD	binding	domain
malic	PF00390.14	gi|568164516|ref|YP_008948056.1|	-	1.9e-27	96.0	0.2	1e-24	87.1	0.2	2.5	1	1	0	1	1	1	1	Malic	enzyme,	N-terminal	domain
AdoHcyase_NAD	PF00670.16	gi|568164516|ref|YP_008948056.1|	-	0.0022	17.8	0.0	0.0045	16.8	0.0	1.5	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
Shikimate_DH	PF01488.15	gi|568164516|ref|YP_008948056.1|	-	0.0073	16.4	0.1	0.058	13.4	0.0	2.2	2	0	0	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
DUF4031	PF13223.1	gi|568164516|ref|YP_008948056.1|	-	0.037	14.1	0.0	0.076	13.1	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4031)
Oxidored_nitro	PF00148.14	gi|568164516|ref|YP_008948056.1|	-	0.056	12.0	0.0	0.09	11.3	0.0	1.3	1	0	0	1	1	1	0	Nitrogenase	component	1	type	Oxidoreductase
Peptidase_S9	PF00326.16	gi|568164517|ref|YP_008948057.1|	-	2e-38	131.7	0.0	4.2e-38	130.7	0.0	1.4	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
Abhydrolase_5	PF12695.2	gi|568164517|ref|YP_008948057.1|	-	3.1e-14	52.9	0.0	6e-14	52.0	0.0	1.5	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_6	PF12697.2	gi|568164517|ref|YP_008948057.1|	-	7.9e-13	48.8	0.0	1e-11	45.1	0.0	2.1	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Peptidase_S15	PF02129.13	gi|568164517|ref|YP_008948057.1|	-	9.3e-08	31.8	0.2	0.0017	17.8	0.3	2.7	2	1	1	3	3	3	2	X-Pro	dipeptidyl-peptidase	(S15	family)
DLH	PF01738.13	gi|568164517|ref|YP_008948057.1|	-	1.7e-07	30.7	0.0	0.00065	19.0	0.0	2.2	2	0	0	2	2	2	2	Dienelactone	hydrolase	family
Abhydrolase_1	PF00561.15	gi|568164517|ref|YP_008948057.1|	-	7.8e-06	25.6	0.3	0.00027	20.5	0.1	2.3	1	1	1	2	2	2	1	alpha/beta	hydrolase	fold
LIP	PF03583.9	gi|568164517|ref|YP_008948057.1|	-	0.0002	20.6	1.0	0.011	15.0	0.1	2.3	1	1	1	2	2	2	1	Secretory	lipase
Abhydrolase_3	PF07859.8	gi|568164517|ref|YP_008948057.1|	-	0.014	14.9	0.2	0.16	11.5	0.0	2.5	2	1	0	2	2	2	0	alpha/beta	hydrolase	fold
BAAT_C	PF08840.6	gi|568164517|ref|YP_008948057.1|	-	0.02	14.6	0.0	0.93	9.1	0.0	2.3	2	0	0	2	2	2	0	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
EF-hand_3	PF09069.6	gi|568164518|ref|YP_008948058.1|	-	0.15	12.1	0.0	0.16	12.0	0.0	1.2	1	0	0	1	1	1	0	EF-hand
DNA_pol_B	PF00136.16	gi|568164519|ref|YP_008948059.1|	-	3.8e-19	68.8	0.9	3.3e-18	65.7	0.6	2.2	1	1	0	1	1	1	1	DNA	polymerase	family	B
DUF1626	PF07788.6	gi|568164521|ref|YP_008948061.1|	-	0.0044	16.7	0.7	0.0064	16.2	0.5	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1626)
DNA_ligase_A_M	PF01068.16	gi|568164521|ref|YP_008948061.1|	-	0.077	12.3	0.0	0.092	12.0	0.0	1.2	1	0	0	1	1	1	0	ATP	dependent	DNA	ligase	domain
DUF1703	PF08011.6	gi|568164521|ref|YP_008948061.1|	-	0.1	12.3	0.8	0.13	11.9	0.5	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1703)
OrfB_IS605	PF01385.14	gi|568164522|ref|YP_008948062.1|	-	4e-58	196.4	0.9	9e-58	195.3	0.3	1.8	2	0	0	2	2	2	1	Probable	transposase
OrfB_Zn_ribbon	PF07282.6	gi|568164522|ref|YP_008948062.1|	-	2.6e-12	46.2	0.0	4.7e-12	45.3	0.0	1.4	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
HTH_OrfB_IS605	PF12323.3	gi|568164522|ref|YP_008948062.1|	-	1.9e-05	23.9	0.2	1.9e-05	23.9	0.1	2.2	2	0	0	2	2	2	1	Helix-turn-helix	domain
Myb_DNA-bind_4	PF13837.1	gi|568164522|ref|YP_008948062.1|	-	1.6	8.9	6.3	0.47	10.6	1.9	1.9	2	0	0	2	2	2	0	Myb/SANT-like	DNA-binding	domain
DUF2079	PF09852.4	gi|568164978|ref|YP_008948064.1|	-	0.0083	14.8	2.7	0.012	14.3	1.9	1.2	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2079)
TRAM_LAG1_CLN8	PF03798.11	gi|568164978|ref|YP_008948064.1|	-	0.0098	15.4	1.8	0.011	15.2	1.2	1.2	1	0	0	1	1	1	1	TLC	domain
zinc_ribbon_2	PF13240.1	gi|568164979|ref|YP_008948065.1|	-	1.8e-05	24.0	4.5	3e-05	23.3	3.1	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|568164979|ref|YP_008948065.1|	-	2.4e-05	23.3	4.1	3.8e-05	22.7	2.8	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
DZR	PF12773.2	gi|568164979|ref|YP_008948065.1|	-	0.0002	21.1	2.4	0.00032	20.4	1.7	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-RanBP	PF00641.13	gi|568164979|ref|YP_008948065.1|	-	0.00034	19.6	1.6	0.00073	18.5	1.1	1.5	1	0	0	1	1	1	1	Zn-finger	in	Ran	binding	protein	and	others
Gemini_mov	PF01708.11	gi|568164979|ref|YP_008948065.1|	-	0.0038	16.7	0.2	0.007	15.8	0.1	1.5	1	0	0	1	1	1	1	Geminivirus	putative	movement	protein
DUF3357	PF11837.3	gi|568164979|ref|YP_008948065.1|	-	0.031	14.1	0.0	0.048	13.4	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3357)
Ribosomal_L37e	PF01907.14	gi|568164979|ref|YP_008948065.1|	-	0.73	9.6	5.0	2.9	7.7	3.4	1.9	1	1	0	1	1	1	0	Ribosomal	protein	L37e
RibD_C	PF01872.12	gi|568164523|ref|YP_008948066.1|	-	2.9e-51	173.9	0.0	3.3e-51	173.7	0.0	1.0	1	0	0	1	1	1	1	RibD	C-terminal	domain
GDPD	PF03009.12	gi|568164524|ref|YP_008948067.1|	-	2.5e-29	102.5	0.8	4e-29	101.9	0.6	1.3	1	0	0	1	1	1	1	Glycerophosphoryl	diester	phosphodiesterase	family
GDPD_2	PF13653.1	gi|568164524|ref|YP_008948067.1|	-	0.0023	18.0	0.2	0.017	15.3	0.1	2.3	2	0	0	2	2	2	1	Glycerophosphoryl	diester	phosphodiesterase	family
DUF488	PF04343.8	gi|568164525|ref|YP_008948068.1|	-	6e-19	68.6	0.0	1e-18	67.8	0.0	1.3	1	1	0	1	1	1	1	Protein	of	unknown	function,	DUF488
HTH_10	PF04967.7	gi|568164526|ref|YP_008948069.1|	-	5.4e-21	73.9	0.2	1.1e-20	72.9	0.2	1.6	1	0	0	1	1	1	1	HTH	DNA	binding	domain
Sigma70_r4	PF04545.11	gi|568164526|ref|YP_008948069.1|	-	5.2e-06	25.6	1.5	1.1e-05	24.6	1.0	1.5	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_24	PF13412.1	gi|568164526|ref|YP_008948069.1|	-	0.0012	18.2	0.2	0.0012	18.2	0.1	2.1	3	0	0	3	3	3	1	Winged	helix-turn-helix	DNA-binding
HTH_26	PF13443.1	gi|568164526|ref|YP_008948069.1|	-	0.0049	17.0	0.1	0.016	15.3	0.0	1.8	1	0	0	1	1	1	1	Cro/C1-type	HTH	DNA-binding	domain
MarR_2	PF12802.2	gi|568164526|ref|YP_008948069.1|	-	0.023	14.3	0.0	0.051	13.2	0.0	1.5	1	0	0	1	1	1	0	MarR	family
HTH_37	PF13744.1	gi|568164526|ref|YP_008948069.1|	-	0.037	13.8	0.0	0.14	11.9	0.0	1.9	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_AsnC-type	PF13404.1	gi|568164526|ref|YP_008948069.1|	-	0.061	12.8	1.3	0.13	11.8	0.0	2.1	2	1	1	3	3	3	0	AsnC-type	helix-turn-helix	domain
IF2_N	PF04760.10	gi|568164526|ref|YP_008948069.1|	-	0.066	12.8	4.2	9.7	5.9	0.1	3.4	3	0	0	3	3	3	0	Translation	initiation	factor	IF-2,	N-terminal	region
HTH_27	PF13463.1	gi|568164526|ref|YP_008948069.1|	-	0.091	13.1	1.4	0.31	11.4	0.0	2.4	2	1	0	2	2	2	0	Winged	helix	DNA-binding	domain
HTH_23	PF13384.1	gi|568164526|ref|YP_008948069.1|	-	0.11	12.1	0.8	0.49	10.1	0.0	2.2	2	0	0	2	2	2	0	Homeodomain-like	domain
HTH_Mga	PF08280.6	gi|568164526|ref|YP_008948069.1|	-	0.17	11.6	0.3	0.17	11.6	0.2	2.9	3	1	0	3	3	3	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
PCI	PF01399.22	gi|568164526|ref|YP_008948069.1|	-	0.18	12.1	1.5	0.31	11.3	0.1	2.1	2	1	0	2	2	2	0	PCI	domain
GerE	PF00196.14	gi|568164526|ref|YP_008948069.1|	-	0.19	11.0	2.7	12	5.3	0.0	3.1	4	0	0	4	4	4	0	Bacterial	regulatory	proteins,	luxR	family
Sigma70_r4_2	PF08281.7	gi|568164526|ref|YP_008948069.1|	-	0.22	11.0	2.6	3	7.3	0.0	3.0	3	0	0	3	3	3	0	Sigma-70,	region	4
HTH_17	PF12728.2	gi|568164526|ref|YP_008948069.1|	-	0.23	11.7	1.4	0.85	9.9	0.2	2.3	2	1	1	3	3	3	0	Helix-turn-helix	domain
LexA_DNA_bind	PF01726.11	gi|568164526|ref|YP_008948069.1|	-	0.23	11.0	1.6	2.6	7.6	1.1	2.4	1	1	0	1	1	1	0	LexA	DNA	binding	domain
HTH_19	PF12844.2	gi|568164526|ref|YP_008948069.1|	-	0.83	9.7	0.0	0.83	9.7	0.0	2.4	2	0	0	2	2	2	0	Helix-turn-helix	domain
Amidase	PF01425.16	gi|568164527|ref|YP_008948070.1|	-	2.2e-113	379.4	0.0	2.5e-113	379.2	0.0	1.0	1	0	0	1	1	1	1	Amidase
DUF973	PF06157.6	gi|568164528|ref|YP_008948071.1|	-	0.00019	20.5	13.5	0.00056	18.9	9.2	1.6	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF973)
LTD	PF00932.14	gi|568164528|ref|YP_008948071.1|	-	0.0048	16.9	0.1	0.0061	16.6	0.1	1.2	1	0	0	1	1	1	1	Lamin	Tail	Domain
PCNA_C	PF02747.10	gi|568164528|ref|YP_008948071.1|	-	0.01	15.7	0.3	0.016	15.1	0.2	1.2	1	0	0	1	1	1	0	Proliferating	cell	nuclear	antigen,	C-terminal	domain
Big_2	PF02368.13	gi|568164528|ref|YP_008948071.1|	-	0.052	13.4	4.3	2.6	8.0	0.2	2.4	2	0	0	2	2	2	0	Bacterial	Ig-like	domain	(group	2)
DUF11	PF01345.13	gi|568164528|ref|YP_008948071.1|	-	0.082	12.9	3.2	0.12	12.4	1.0	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF11
CARDB	PF07705.6	gi|568164528|ref|YP_008948071.1|	-	0.087	12.8	2.0	0.14	12.2	1.4	1.3	1	0	0	1	1	1	0	CARDB
rpo132	PF12415.3	gi|568164528|ref|YP_008948071.1|	-	0.1	11.5	0.1	0.17	10.8	0.1	1.3	1	0	0	1	1	1	0	Poxvirus	DNA	dependent	RNA	polymerase
DUF3753	PF12575.3	gi|568164528|ref|YP_008948071.1|	-	0.15	11.8	1.0	0.29	10.9	0.7	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3753)
DUF4251	PF14059.1	gi|568164528|ref|YP_008948071.1|	-	0.23	11.2	2.0	2	8.2	0.0	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4251)
MacB_PCD	PF12704.2	gi|568164528|ref|YP_008948071.1|	-	2	7.9	5.9	3.2	7.2	4.1	1.4	1	1	0	1	1	1	0	MacB-like	periplasmic	core	domain
Thermopsin	PF05317.6	gi|568164529|ref|YP_008948072.1|	-	3.4e-79	265.5	22.0	3.4e-79	265.5	15.2	2.8	2	1	0	3	3	3	1	Thermopsin
DUF4265	PF14085.1	gi|568164530|ref|YP_008948073.1|	-	0.12	12.1	0.1	0.72	9.6	0.0	2.2	2	1	2	4	4	4	0	Domain	of	unknown	function	(DUF4265)
DUF973	PF06157.6	gi|568164980|ref|YP_008948074.1|	-	6.5e-19	67.9	17.9	6.5e-19	67.9	12.4	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
Lactamase_B	PF00753.22	gi|568164532|ref|YP_008948077.1|	-	5.6e-15	55.5	0.0	7.9e-15	55.0	0.0	1.3	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|568164532|ref|YP_008948077.1|	-	1.2e-05	25.0	0.1	1.6e-05	24.5	0.1	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
DUF3024	PF11225.3	gi|568164532|ref|YP_008948077.1|	-	0.15	11.9	0.9	0.42	10.5	0.6	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3024)
Sugar_tr	PF00083.19	gi|568164533|ref|YP_008948078.1|	-	1.1e-67	228.6	31.7	1.2e-67	228.4	22.0	1.0	1	0	0	1	1	1	1	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|568164533|ref|YP_008948078.1|	-	1.1e-34	119.7	42.9	1.1e-34	119.7	29.8	1.7	1	1	1	2	2	2	1	Major	Facilitator	Superfamily
DUF2663	PF10864.3	gi|568164533|ref|YP_008948078.1|	-	0.14	12.3	1.0	25	5.0	0.1	3.0	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2663)
AA_permease	PF00324.16	gi|568164535|ref|YP_008948080.1|	-	4.3e-31	107.7	54.9	6e-31	107.3	38.1	1.1	1	0	0	1	1	1	1	Amino	acid	permease
AA_permease_2	PF13520.1	gi|568164535|ref|YP_008948080.1|	-	1.9e-28	99.2	56.6	3.8e-28	98.1	39.0	1.5	1	1	0	1	1	1	1	Amino	acid	permease
Cu_amine_oxid	PF01179.15	gi|568164536|ref|YP_008948081.1|	-	2.7e-161	536.9	0.0	3.5e-161	536.5	0.0	1.1	1	0	0	1	1	1	1	Copper	amine	oxidase,	enzyme	domain
Cu_amine_oxidN3	PF02728.11	gi|568164536|ref|YP_008948081.1|	-	2.2e-18	66.1	0.0	4.3e-18	65.2	0.0	1.5	1	0	0	1	1	1	1	Copper	amine	oxidase,	N3	domain
Cu_amine_oxidN2	PF02727.11	gi|568164536|ref|YP_008948081.1|	-	1.1e-11	44.6	0.1	2.2e-11	43.6	0.1	1.5	1	0	0	1	1	1	1	Copper	amine	oxidase,	N2	domain
HTH_10	PF04967.7	gi|568164537|ref|YP_008948082.1|	-	1.4e-22	78.9	0.3	3e-22	77.9	0.2	1.6	1	0	0	1	1	1	1	HTH	DNA	binding	domain
Sigma70_r4	PF04545.11	gi|568164537|ref|YP_008948082.1|	-	1.6e-06	27.3	0.4	3.7e-06	26.1	0.2	1.6	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_24	PF13412.1	gi|568164537|ref|YP_008948082.1|	-	9.1e-05	21.7	0.4	9.1e-05	21.7	0.3	2.3	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_26	PF13443.1	gi|568164537|ref|YP_008948082.1|	-	0.01	16.0	0.1	0.036	14.2	0.1	1.9	1	0	0	1	1	1	0	Cro/C1-type	HTH	DNA-binding	domain
HTH_Mga	PF08280.6	gi|568164537|ref|YP_008948082.1|	-	0.016	14.9	0.8	0.15	11.8	0.1	2.8	2	1	0	2	2	2	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
MarR	PF01047.17	gi|568164537|ref|YP_008948082.1|	-	0.017	14.8	0.0	0.046	13.4	0.0	1.8	1	1	0	1	1	1	0	MarR	family
UPF0122	PF04297.9	gi|568164537|ref|YP_008948082.1|	-	0.019	14.9	1.8	0.15	12.0	0.2	2.4	2	0	0	2	2	2	0	Putative	helix-turn-helix	protein,	YlxM	/	p13	like
LRR_2	PF07723.8	gi|568164537|ref|YP_008948082.1|	-	0.024	15.0	0.0	0.08	13.4	0.0	2.0	1	0	0	1	1	1	0	Leucine	Rich	Repeat
HTH_27	PF13463.1	gi|568164537|ref|YP_008948082.1|	-	0.026	14.8	0.0	0.09	13.1	0.0	1.9	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
MarR_2	PF12802.2	gi|568164537|ref|YP_008948082.1|	-	0.026	14.1	0.1	0.051	13.2	0.0	1.6	1	0	0	1	1	1	0	MarR	family
LexA_DNA_bind	PF01726.11	gi|568164537|ref|YP_008948082.1|	-	0.032	13.7	0.9	0.19	11.3	0.6	2.3	1	1	0	1	1	1	0	LexA	DNA	binding	domain
PCI	PF01399.22	gi|568164537|ref|YP_008948082.1|	-	0.038	14.3	1.0	0.064	13.5	0.2	1.8	2	1	0	2	2	2	0	PCI	domain
GerE	PF00196.14	gi|568164537|ref|YP_008948082.1|	-	0.051	12.9	2.8	0.34	10.2	0.6	2.7	2	1	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
GIT_SHD	PF08518.6	gi|568164537|ref|YP_008948082.1|	-	0.076	12.3	2.2	3.5	7.0	0.0	3.0	3	0	0	3	3	3	0	Spa2	homology	domain	(SHD)	of	GIT
HTH_19	PF12844.2	gi|568164537|ref|YP_008948082.1|	-	0.093	12.7	0.2	0.34	10.9	0.0	2.1	3	0	0	3	3	1	0	Helix-turn-helix	domain
HTH_AsnC-type	PF13404.1	gi|568164537|ref|YP_008948082.1|	-	0.094	12.2	1.5	0.15	11.6	0.0	2.0	2	0	0	2	2	2	0	AsnC-type	helix-turn-helix	domain
HTH_Tnp_ISL3	PF13542.1	gi|568164537|ref|YP_008948082.1|	-	0.1	11.8	0.0	0.44	9.7	0.0	2.1	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_23	PF13384.1	gi|568164537|ref|YP_008948082.1|	-	0.1	12.2	0.2	0.41	10.3	0.1	2.0	2	0	0	2	2	2	0	Homeodomain-like	domain
HTH_17	PF12728.2	gi|568164537|ref|YP_008948082.1|	-	0.1	12.8	0.8	0.24	11.6	0.1	2.0	2	0	0	2	2	2	0	Helix-turn-helix	domain
LAGLIDADG_3	PF14528.1	gi|568164537|ref|YP_008948082.1|	-	0.59	10.4	4.5	5.2	7.3	0.4	3.1	2	2	0	2	2	2	0	LAGLIDADG-like	domain
DUF488	PF04343.8	gi|568164538|ref|YP_008948083.1|	-	6.9e-26	91.0	0.1	8.6e-26	90.7	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF488
Aldose_epim	PF01263.15	gi|568164539|ref|YP_008948084.1|	-	7.5e-38	130.3	0.0	1.8e-37	129.0	0.0	1.5	1	1	0	1	1	1	1	Aldose	1-epimerase
ABC2_membrane	PF01061.19	gi|568164540|ref|YP_008948085.1|	-	6.9e-29	100.5	22.6	6.9e-29	100.5	15.7	1.8	1	1	1	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.2	gi|568164540|ref|YP_008948085.1|	-	6.5e-15	55.0	28.0	6.5e-15	55.0	19.4	1.3	2	0	0	2	2	2	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.2	gi|568164540|ref|YP_008948085.1|	-	1.1e-06	27.7	17.8	1.1e-06	27.7	12.3	1.6	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
IncA	PF04156.9	gi|568164540|ref|YP_008948085.1|	-	8.3	5.9	6.6	14	5.1	4.6	1.3	1	0	0	1	1	1	0	IncA	protein
Amidohydro_2	PF04909.9	gi|568164541|ref|YP_008948086.1|	-	5e-20	72.2	0.0	7.1e-20	71.6	0.0	1.3	1	0	0	1	1	1	1	Amidohydrolase
MFS_1	PF07690.11	gi|568164542|ref|YP_008948087.1|	-	1.5e-31	109.4	53.2	1.1e-28	99.9	17.9	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
MFS_2	PF13347.1	gi|568164542|ref|YP_008948087.1|	-	0.00032	19.2	8.9	0.00032	19.2	6.2	2.5	1	1	1	2	2	2	2	MFS/sugar	transport	protein
BPD_transp_2	PF02653.11	gi|568164982|ref|YP_008948088.1|	-	4.2e-06	25.9	3.2	4.9e-06	25.7	2.2	1.0	1	0	0	1	1	1	1	Branched-chain	amino	acid	transport	system	/	permease	component
FtsX	PF02687.16	gi|568164982|ref|YP_008948088.1|	-	0.62	9.8	3.9	0.77	9.5	2.7	1.1	1	0	0	1	1	1	0	FtsX-like	permease	family
Ribonuc_red_sm	PF00268.16	gi|568164543|ref|YP_008948089.1|	-	2.9e-14	52.7	0.4	6.8e-14	51.5	0.3	1.5	1	1	0	1	1	1	1	Ribonucleotide	reductase,	small	chain
Rubrerythrin	PF02915.12	gi|568164543|ref|YP_008948089.1|	-	4.6e-05	23.7	0.0	0.019	15.2	0.0	2.3	2	0	0	2	2	2	2	Rubrerythrin
Malate_synthase	PF01274.17	gi|568164544|ref|YP_008948091.1|	-	1.2e-42	145.6	0.0	2.6e-38	131.3	0.0	2.2	2	0	0	2	2	2	2	Malate	synthase
ICL	PF00463.16	gi|568164545|ref|YP_008948092.1|	-	4.6e-151	503.6	0.4	1.5e-83	280.8	0.0	2.0	1	1	1	2	2	2	2	Isocitrate	lyase	family
PEP_mutase	PF13714.1	gi|568164545|ref|YP_008948092.1|	-	1.8e-16	60.0	0.0	3.5e-16	59.1	0.0	1.5	1	1	0	1	1	1	1	Phosphoenolpyruvate	phosphomutase
Antitoxin-MazE	PF04014.13	gi|568164547|ref|YP_008948094.1|	-	1.6e-13	50.0	0.4	2.4e-13	49.4	0.3	1.3	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
SH3_9	PF14604.1	gi|568164547|ref|YP_008948094.1|	-	0.013	15.1	0.1	0.094	12.3	0.0	2.0	1	1	0	1	1	1	0	Variant	SH3	domain
7tm_1	PF00001.16	gi|568164984|ref|YP_008948095.1|	-	0.088	11.9	0.4	0.092	11.8	0.3	1.0	1	0	0	1	1	1	0	7	transmembrane	receptor	(rhodopsin	family)
PaREP1	PF05942.6	gi|568164548|ref|YP_008948097.1|	-	8.3e-26	90.1	0.9	9.6e-26	89.9	0.6	1.0	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
HEPN	PF05168.9	gi|568164548|ref|YP_008948097.1|	-	0.0028	17.5	0.4	0.0032	17.3	0.3	1.1	1	0	0	1	1	1	1	HEPN	domain
DUF1140	PF06600.6	gi|568164548|ref|YP_008948097.1|	-	0.053	13.6	0.5	0.081	13.0	0.4	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1140)
PaREP1	PF05942.6	gi|568164549|ref|YP_008948098.1|	-	2.9e-23	81.9	0.4	3.4e-23	81.6	0.3	1.1	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
MR_MLE_C	PF13378.1	gi|568164550|ref|YP_008948099.1|	-	2.5e-19	69.3	0.0	6e-19	68.0	0.0	1.6	2	0	0	2	2	2	1	Enolase	C-terminal	domain-like
MR_MLE	PF01188.16	gi|568164550|ref|YP_008948099.1|	-	1.3e-18	67.2	0.4	1.9e-17	63.5	0.0	2.5	3	0	0	3	3	3	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
MR_MLE_N	PF02746.11	gi|568164550|ref|YP_008948099.1|	-	7.6e-10	38.8	0.0	1.3e-09	38.0	0.0	1.3	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	N-terminal	domain
B5	PF03484.10	gi|568164550|ref|YP_008948099.1|	-	0.026	14.3	0.0	2.2	8.1	0.0	3.2	3	0	0	3	3	3	0	tRNA	synthetase	B5	domain
His_biosynth	PF00977.16	gi|568164550|ref|YP_008948099.1|	-	0.064	12.5	0.0	0.11	11.7	0.0	1.4	1	0	0	1	1	1	0	Histidine	biosynthesis	protein
Rhodanese	PF00581.15	gi|568164552|ref|YP_008948101.1|	-	1.1e-42	144.9	0.2	3.3e-22	78.9	0.0	2.2	2	0	0	2	2	2	2	Rhodanese-like	domain
CCD	PF07860.6	gi|568164553|ref|YP_008948102.1|	-	0.037	13.4	0.0	0.045	13.2	0.0	1.3	1	0	0	1	1	1	0	WisP	family	C-Terminal	Region
DUF1803	PF08820.5	gi|568164553|ref|YP_008948102.1|	-	0.08	12.6	0.1	0.11	12.2	0.1	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1803)
TP_methylase	PF00590.15	gi|568164554|ref|YP_008948103.1|	-	1.9e-41	142.1	0.0	2.2e-41	141.9	0.0	1.0	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
NIR_SIR	PF01077.17	gi|568164555|ref|YP_008948104.1|	-	1.1e-34	119.0	0.0	2.6e-31	108.1	0.0	3.0	3	2	0	3	3	3	2	Nitrite	and	sulphite	reductase	4Fe-4S	domain
NIR_SIR_ferr	PF03460.12	gi|568164555|ref|YP_008948104.1|	-	1.2e-24	85.6	0.4	2.3e-11	43.1	0.0	3.7	4	1	0	4	4	4	2	Nitrite/Sulfite	reductase	ferredoxin-like	half	domain
PAPS_reduct	PF01507.14	gi|568164556|ref|YP_008948105.1|	-	5.5e-45	153.3	0.1	6.6e-45	153.0	0.0	1.1	1	0	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
Oligomerisation	PF02410.10	gi|568164556|ref|YP_008948105.1|	-	0.014	15.3	0.0	0.028	14.4	0.0	1.4	1	0	0	1	1	1	0	Oligomerisation	domain
ATP-sulfurylase	PF01747.12	gi|568164557|ref|YP_008948106.1|	-	7.6e-81	270.5	0.0	9.8e-81	270.1	0.0	1.1	1	0	0	1	1	1	1	ATP-sulfurylase
PUA_2	PF14306.1	gi|568164557|ref|YP_008948106.1|	-	1.3e-43	148.1	0.1	2.2e-43	147.4	0.0	1.3	1	0	0	1	1	1	1	PUA-like	domain
TF_Zn_Ribbon	PF08271.7	gi|568164557|ref|YP_008948106.1|	-	0.00028	20.1	0.5	0.00084	18.6	0.4	1.8	1	0	0	1	1	1	1	TFIIB	zinc-binding
GnsAB	PF08178.6	gi|568164558|ref|YP_008948107.1|	-	0.14	11.7	1.8	0.64	9.7	0.1	2.3	2	0	0	2	2	2	0	GnsA/GnsB	family
ADH_N	PF08240.7	gi|568164559|ref|YP_008948108.1|	-	3.4e-24	84.6	1.1	5.4e-23	80.8	0.8	2.2	1	1	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|568164559|ref|YP_008948108.1|	-	4.3e-15	55.3	0.0	4.2e-14	52.2	0.0	2.2	1	1	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|568164559|ref|YP_008948108.1|	-	2.2e-11	44.7	0.0	5.2e-11	43.5	0.0	1.7	1	1	0	1	1	1	1	Zinc-binding	dehydrogenase
Epimerase	PF01370.16	gi|568164559|ref|YP_008948108.1|	-	0.026	13.9	0.1	0.046	13.1	0.0	1.4	1	0	0	1	1	1	0	NAD	dependent	epimerase/dehydratase	family
Polysacc_synt_2	PF02719.10	gi|568164559|ref|YP_008948108.1|	-	0.06	12.2	0.1	0.091	11.6	0.1	1.3	1	0	0	1	1	1	0	Polysaccharide	biosynthesis	protein
adh_short	PF00106.20	gi|568164559|ref|YP_008948108.1|	-	0.071	13.0	0.0	0.13	12.1	0.0	1.5	1	0	0	1	1	1	0	short	chain	dehydrogenase
ThiF	PF00899.16	gi|568164559|ref|YP_008948108.1|	-	0.078	12.7	0.8	0.16	11.7	0.5	1.5	1	0	0	1	1	1	0	ThiF	family
BPL_LplA_LipB	PF03099.14	gi|568164560|ref|YP_008948109.1|	-	4.8e-07	29.8	0.0	1e-06	28.7	0.0	1.5	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
Lip_prot_lig_C	PF10437.4	gi|568164560|ref|YP_008948109.1|	-	5.9e-05	22.6	1.1	0.00012	21.7	0.1	2.0	2	1	1	3	3	3	1	Bacterial	lipoate	protein	ligase	C-terminus
AMP-binding	PF00501.23	gi|568164561|ref|YP_008948110.1|	-	1.2e-66	224.9	0.0	1.3e-66	224.6	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|568164561|ref|YP_008948110.1|	-	0.0003	21.6	0.0	0.0005	20.9	0.0	1.4	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
3HCDH_N	PF02737.13	gi|568164562|ref|YP_008948111.1|	-	6.7e-66	221.3	1.1	1.2e-65	220.5	0.8	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
ECH	PF00378.15	gi|568164562|ref|YP_008948111.1|	-	3.3e-48	163.9	0.0	5.2e-48	163.2	0.0	1.3	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
3HCDH	PF00725.17	gi|568164562|ref|YP_008948111.1|	-	4e-44	148.9	0.1	4.6e-23	81.4	0.1	2.6	2	0	0	2	2	2	2	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
NAD_binding_2	PF03446.10	gi|568164562|ref|YP_008948111.1|	-	0.00017	21.4	0.0	0.00038	20.3	0.0	1.6	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
NAD_Gly3P_dh_N	PF01210.18	gi|568164562|ref|YP_008948111.1|	-	0.00066	19.4	0.1	0.0013	18.4	0.0	1.6	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
F420_oxidored	PF03807.12	gi|568164562|ref|YP_008948111.1|	-	0.0068	16.8	0.0	0.021	15.2	0.0	2.0	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
Pyr_redox	PF00070.22	gi|568164562|ref|YP_008948111.1|	-	0.012	15.9	0.1	0.096	13.0	0.1	2.4	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
2-Hacid_dh_C	PF02826.14	gi|568164562|ref|YP_008948111.1|	-	0.019	14.1	0.1	0.037	13.1	0.1	1.4	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Methyltransf_11	PF08241.7	gi|568164562|ref|YP_008948111.1|	-	0.05	14.0	0.0	0.14	12.6	0.0	1.8	1	0	0	1	1	1	0	Methyltransferase	domain
XdhC_C	PF13478.1	gi|568164562|ref|YP_008948111.1|	-	0.098	12.9	0.0	0.22	11.8	0.0	1.6	1	0	0	1	1	1	0	XdhC	Rossmann	domain
Dimerisation	PF08100.6	gi|568164562|ref|YP_008948111.1|	-	0.45	10.3	1.8	0.63	9.9	0.2	2.1	2	0	0	2	2	2	0	Dimerisation	domain
Thiolase_N	PF00108.18	gi|568164563|ref|YP_008948112.1|	-	4.7e-13	48.7	0.3	7.1e-11	41.5	0.0	2.4	2	0	0	2	2	2	2	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.13	gi|568164563|ref|YP_008948112.1|	-	1.2e-08	34.4	0.2	2.7e-06	26.8	0.0	2.8	2	0	0	2	2	2	2	Thiolase,	C-terminal	domain
ACP_syn_III	PF08545.5	gi|568164563|ref|YP_008948112.1|	-	2.5e-07	30.2	0.1	1e-05	25.0	0.0	2.4	2	0	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
ketoacyl-synt	PF00109.21	gi|568164563|ref|YP_008948112.1|	-	4.8e-07	29.5	6.2	1.4e-06	28.0	0.5	2.7	2	1	1	3	3	3	1	Beta-ketoacyl	synthase,	N-terminal	domain
FAE1_CUT1_RppA	PF08392.7	gi|568164563|ref|YP_008948112.1|	-	0.00039	19.6	0.0	0.00071	18.7	0.0	1.3	1	0	0	1	1	1	1	FAE1/Type	III	polyketide	synthase-like	protein
DUF35	PF01796.12	gi|568164564|ref|YP_008948113.1|	-	9.9e-13	48.1	0.0	1.7e-12	47.3	0.0	1.4	1	0	0	1	1	1	1	DUF35	OB-fold	domain
DUF35_N	PF12172.3	gi|568164564|ref|YP_008948113.1|	-	8e-11	41.5	0.1	1.2e-10	40.9	0.0	1.3	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Auto_anti-p27	PF06677.7	gi|568164564|ref|YP_008948113.1|	-	0.00051	19.7	0.8	0.0015	18.2	0.5	1.8	2	0	0	2	2	2	1	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
AMP-binding	PF00501.23	gi|568164565|ref|YP_008948114.1|	-	1.7e-78	263.9	0.0	2.1e-78	263.6	0.0	1.0	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|568164565|ref|YP_008948114.1|	-	1e-16	61.6	0.0	2.2e-16	60.5	0.0	1.6	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
Ribonuc_red_sm	PF00268.16	gi|568164566|ref|YP_008948115.1|	-	4.8e-09	35.6	0.0	1.7e-08	33.8	0.0	1.8	1	1	0	1	1	1	1	Ribonucleotide	reductase,	small	chain
AurF	PF11583.3	gi|568164566|ref|YP_008948115.1|	-	0.0017	17.3	0.2	0.47	9.3	0.0	2.4	2	1	0	2	2	2	2	P-aminobenzoate	N-oxygenase	AurF
Toprim_4	PF13662.1	gi|568164566|ref|YP_008948115.1|	-	0.078	12.9	0.0	0.18	11.8	0.0	1.6	1	0	0	1	1	1	0	Toprim	domain
Abhydrolase_6	PF12697.2	gi|568164567|ref|YP_008948116.1|	-	8.4e-33	114.1	0.0	9.9e-33	113.9	0.0	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|568164567|ref|YP_008948116.1|	-	1.6e-20	73.6	0.1	7.6e-18	64.9	0.1	2.2	1	1	0	1	1	1	1	alpha/beta	hydrolase	fold
Abhydrolase_5	PF12695.2	gi|568164567|ref|YP_008948116.1|	-	5.6e-19	68.3	0.0	2.2e-18	66.3	0.0	1.8	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Peptidase_S9	PF00326.16	gi|568164567|ref|YP_008948116.1|	-	0.0015	17.8	0.5	0.39	9.8	0.0	2.4	2	1	0	2	2	2	2	Prolyl	oligopeptidase	family
FSH1	PF03959.8	gi|568164567|ref|YP_008948116.1|	-	0.0039	16.6	0.0	0.0082	15.5	0.0	1.6	1	1	0	1	1	1	1	Serine	hydrolase	(FSH1)
Abhydrolase_4	PF08386.5	gi|568164567|ref|YP_008948116.1|	-	0.012	15.4	0.0	0.019	14.8	0.0	1.2	1	0	0	1	1	1	0	TAP-like	protein
TAT_signal	PF10518.4	gi|568164567|ref|YP_008948116.1|	-	0.028	14.4	0.6	0.06	13.3	0.4	1.5	1	0	0	1	1	1	0	TAT	(twin-arginine	translocation)	pathway	signal	sequence
DLH	PF01738.13	gi|568164567|ref|YP_008948116.1|	-	0.061	12.5	0.0	0.37	10.0	0.0	1.9	2	0	0	2	2	2	0	Dienelactone	hydrolase	family
DUF2048	PF09752.4	gi|568164567|ref|YP_008948116.1|	-	0.11	11.3	0.0	0.36	9.6	0.0	1.7	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2048)
PGAP1	PF07819.8	gi|568164567|ref|YP_008948116.1|	-	0.14	11.7	0.0	0.24	10.9	0.0	1.4	1	0	0	1	1	1	0	PGAP1-like	protein
Thioesterase	PF00975.15	gi|568164567|ref|YP_008948116.1|	-	0.18	11.9	0.1	0.28	11.3	0.0	1.2	1	0	0	1	1	1	0	Thioesterase	domain
HPP	PF04982.8	gi|568164568|ref|YP_008948119.1|	-	5.6e-06	26.1	11.1	8.9e-06	25.5	5.4	2.0	1	1	1	2	2	2	1	HPP	family
Fun_ATP-synt_8	PF05933.8	gi|568164568|ref|YP_008948119.1|	-	0.0035	17.3	0.2	0.0035	17.3	0.1	3.3	3	1	1	4	4	4	2	Fungal	ATP	synthase	protein	8	(A6L)
DUF2955	PF11168.3	gi|568164568|ref|YP_008948119.1|	-	0.12	12.0	7.0	0.22	11.1	4.8	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2955)
Tetraspannin	PF00335.15	gi|568164568|ref|YP_008948119.1|	-	0.78	8.9	8.4	11	5.2	5.8	2.1	1	1	0	1	1	1	0	Tetraspanin	family
DUF998	PF06197.8	gi|568164569|ref|YP_008948120.1|	-	1.1e-28	99.8	12.8	1.3e-28	99.5	8.9	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF998)
DUF4131	PF13567.1	gi|568164569|ref|YP_008948120.1|	-	6.5	6.1	12.5	3.2e+02	0.6	8.6	2.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
DUF2892	PF11127.3	gi|568164569|ref|YP_008948120.1|	-	7.4	6.4	7.4	8.5	6.2	0.1	2.7	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2892)
OrfB_IS605	PF01385.14	gi|568164988|ref|YP_008948121.1|	-	1.1e-06	28.2	0.1	1.7e-06	27.5	0.1	1.3	1	0	0	1	1	1	1	Probable	transposase
Tricorn_C1	PF14684.1	gi|568164988|ref|YP_008948121.1|	-	0.33	10.8	3.2	0.18	11.6	0.4	1.8	2	0	0	2	2	2	0	Tricorn	protease	C1	domain
Cas_DxTHG	PF09455.5	gi|568164570|ref|YP_008948123.1|	-	2.1e-39	135.8	15.0	3.7e-39	134.9	10.4	1.4	1	0	0	1	1	1	1	CRISPR-associated	(Cas)	DxTHG	family
CTK3	PF12243.3	gi|568164570|ref|YP_008948123.1|	-	0.00061	19.4	4.2	0.00091	18.8	1.2	2.5	2	0	0	2	2	2	1	CTD	kinase	subunit	gamma	CTK3
Cas_Cas02710	PF09670.5	gi|568164570|ref|YP_008948123.1|	-	0.031	12.9	0.1	0.1	11.2	0.0	1.9	2	0	0	2	2	2	0	CRISPR-associated	protein	(Cas_Cas02710)
Syntaxin-6_N	PF09177.6	gi|568164570|ref|YP_008948123.1|	-	0.27	11.6	2.2	2.1	8.8	0.1	3.3	3	0	0	3	3	3	0	Syntaxin	6,	N-terminal
FlaC_arch	PF05377.6	gi|568164570|ref|YP_008948123.1|	-	0.89	9.5	8.2	0.19	11.6	0.4	3.5	3	1	0	3	3	3	0	Flagella	accessory	protein	C	(FlaC)
TMF_TATA_bd	PF12325.3	gi|568164570|ref|YP_008948123.1|	-	0.91	9.2	3.6	2.7	7.7	0.0	3.2	4	0	0	4	4	4	0	TATA	element	modulatory	factor	1	TATA	binding
Apolipoprotein	PF01442.13	gi|568164990|ref|YP_008948124.1|	-	3.7e-11	42.9	8.9	6.4e-11	42.1	6.1	1.4	1	0	0	1	1	1	1	Apolipoprotein	A1/A4/E	domain
DUF1640	PF07798.6	gi|568164990|ref|YP_008948124.1|	-	9.9e-07	28.9	14.1	7.1e-06	26.1	8.9	2.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1640)
Prominin	PF05478.6	gi|568164990|ref|YP_008948124.1|	-	1.2e-05	23.0	3.3	1.4e-05	22.9	2.3	1.2	1	0	0	1	1	1	1	Prominin
DUF883	PF05957.8	gi|568164990|ref|YP_008948124.1|	-	0.0019	18.5	10.1	0.18	12.2	0.7	2.9	1	1	2	3	3	3	2	Bacterial	protein	of	unknown	function	(DUF883)
Baculo_PEP_C	PF04513.7	gi|568164990|ref|YP_008948124.1|	-	0.0029	17.4	8.4	0.18	11.6	5.8	2.7	1	1	0	1	1	1	1	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
YlqD	PF11068.3	gi|568164990|ref|YP_008948124.1|	-	0.0039	17.2	13.2	0.24	11.4	2.4	2.3	1	1	1	2	2	2	2	YlqD	protein
Gp58	PF07902.6	gi|568164990|ref|YP_008948124.1|	-	0.0054	15.0	2.3	0.0068	14.6	1.6	1.2	1	0	0	1	1	1	1	gp58-like	protein
Syntaxin	PF00804.20	gi|568164990|ref|YP_008948124.1|	-	0.012	15.7	22.8	0.19	11.8	2.6	3.5	1	1	1	2	2	2	0	Syntaxin
OmpH	PF03938.9	gi|568164990|ref|YP_008948124.1|	-	0.018	14.9	3.4	0.018	14.9	2.4	2.5	1	1	2	3	3	3	0	Outer	membrane	protein	(OmpH-like)
SF-assemblin	PF06705.6	gi|568164990|ref|YP_008948124.1|	-	0.018	14.1	23.6	1.3	8.0	16.4	2.6	1	1	0	1	1	1	0	SF-assemblin/beta	giardin
ApoLp-III	PF07464.6	gi|568164990|ref|YP_008948124.1|	-	0.022	14.7	14.7	0.019	14.9	9.5	1.4	1	1	0	1	1	1	0	Apolipophorin-III	precursor	(apoLp-III)
AAA_13	PF13166.1	gi|568164990|ref|YP_008948124.1|	-	0.028	12.9	15.6	0.042	12.3	10.8	1.3	1	0	0	1	1	1	0	AAA	domain
Bacillus_HBL	PF05791.6	gi|568164990|ref|YP_008948124.1|	-	0.035	13.4	12.8	0.17	11.2	7.0	2.4	1	1	1	2	2	2	0	Bacillus	haemolytic	enterotoxin	(HBL)
Gp-FAR-1	PF05823.7	gi|568164990|ref|YP_008948124.1|	-	0.035	14.0	13.8	0.47	10.4	8.6	2.3	1	1	1	2	2	2	0	Nematode	fatty	acid	retinoid	binding	protein	(Gp-FAR-1)
Utp12	PF04003.7	gi|568164990|ref|YP_008948124.1|	-	0.04	13.8	0.4	0.81	9.6	0.0	2.4	1	1	1	2	2	2	0	Dip2/Utp12	Family
DUF3348	PF11828.3	gi|568164990|ref|YP_008948124.1|	-	0.051	12.9	3.5	0.68	9.3	0.4	2.6	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF3348)
AAA_32	PF13654.1	gi|568164990|ref|YP_008948124.1|	-	0.053	12.1	10.8	0.064	11.9	7.5	1.2	1	0	0	1	1	1	0	AAA	domain
Peptidase_M75	PF09375.5	gi|568164990|ref|YP_008948124.1|	-	0.11	11.7	2.9	0.21	10.8	0.6	2.1	1	1	1	2	2	2	0	Imelysin
Fib_alpha	PF08702.5	gi|568164990|ref|YP_008948124.1|	-	0.15	12.1	17.8	0.76	9.8	4.6	2.3	1	1	1	2	2	2	0	Fibrinogen	alpha/beta	chain	family
Vps51	PF08700.6	gi|568164990|ref|YP_008948124.1|	-	0.23	11.3	16.3	0.46	10.3	0.9	4.1	1	1	2	3	3	3	0	Vps51/Vps67
GP41	PF00517.12	gi|568164990|ref|YP_008948124.1|	-	0.25	10.8	7.5	0.48	9.9	0.9	2.4	1	1	0	2	2	2	0	Retroviral	envelope	protein
Metal_resist	PF13801.1	gi|568164990|ref|YP_008948124.1|	-	0.26	11.2	2.0	0.84	9.6	0.8	2.3	1	1	1	2	2	2	0	Heavy-metal	resistance
Exonuc_VII_L	PF02601.10	gi|568164990|ref|YP_008948124.1|	-	0.29	10.2	11.8	0.37	9.9	8.2	1.1	1	0	0	1	1	1	0	Exonuclease	VII,	large	subunit
DUF4168	PF13767.1	gi|568164990|ref|YP_008948124.1|	-	0.34	11.5	9.4	92	3.7	6.5	3.2	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4168)
HisKA_3	PF07730.8	gi|568164990|ref|YP_008948124.1|	-	0.4	11.0	5.8	2.4	8.5	0.1	3.0	2	1	1	3	3	2	0	Histidine	kinase
DUF2968	PF11180.3	gi|568164990|ref|YP_008948124.1|	-	0.69	9.2	6.7	1	8.7	2.0	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2968)
Microvir_H	PF04687.7	gi|568164990|ref|YP_008948124.1|	-	0.69	8.9	5.9	6.7	5.6	3.6	2.2	1	1	1	2	2	2	0	Microvirus	H	protein	(pilot	protein)
DUF2664	PF10867.3	gi|568164990|ref|YP_008948124.1|	-	0.82	10.3	5.5	55	4.4	3.8	2.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2664)
Syntaxin-6_N	PF09177.6	gi|568164990|ref|YP_008948124.1|	-	0.85	10.0	16.3	2	8.8	1.9	3.7	1	1	2	3	3	3	0	Syntaxin	6,	N-terminal
DUF1451	PF07295.6	gi|568164990|ref|YP_008948124.1|	-	0.97	9.2	11.3	0.1	12.3	1.6	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1451)
GrpE	PF01025.14	gi|568164990|ref|YP_008948124.1|	-	0.97	8.9	22.3	0.53	9.8	4.9	2.4	1	1	1	2	2	2	0	GrpE
Flu_NS2	PF00601.14	gi|568164990|ref|YP_008948124.1|	-	1	9.6	10.7	3.9	7.7	0.3	3.6	1	1	2	3	3	3	0	Influenza	non-structural	protein	(NS2)
PhaP_Bmeg	PF09602.5	gi|568164990|ref|YP_008948124.1|	-	1.2	8.9	5.4	7	6.4	0.4	2.3	1	1	1	2	2	2	0	Polyhydroxyalkanoic	acid	inclusion	protein	(PhaP_Bmeg)
DUF848	PF05852.6	gi|568164990|ref|YP_008948124.1|	-	1.3	8.8	17.5	27	4.5	11.3	2.6	1	1	1	2	2	2	0	Gammaherpesvirus	protein	of	unknown	function	(DUF848)
Syntaxin_2	PF14523.1	gi|568164990|ref|YP_008948124.1|	-	2.7	8.0	20.6	0.66	10.0	4.3	3.0	1	1	2	3	3	3	0	Syntaxin-like	protein
Orthopox_A5L	PF06193.6	gi|568164990|ref|YP_008948124.1|	-	3.3	7.6	21.0	2.6	7.9	2.4	2.8	1	1	1	2	2	2	0	Orthopoxvirus	A5L	protein-like
DUF892	PF05974.7	gi|568164990|ref|YP_008948124.1|	-	3.3	7.4	8.5	1.8	8.3	1.0	2.8	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF892)
Rootletin	PF15035.1	gi|568164990|ref|YP_008948124.1|	-	3.6	7.5	20.8	0.79	9.6	0.4	3.4	1	1	2	3	3	3	0	Ciliary	rootlet	component,	centrosome	cohesion
DUF4407	PF14362.1	gi|568164990|ref|YP_008948124.1|	-	3.7	6.4	12.0	6.4	5.6	8.3	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
MADF_DNA_bdg	PF10545.4	gi|568164990|ref|YP_008948124.1|	-	3.8	7.7	10.8	3.1e+02	1.6	7.2	3.2	1	1	0	1	1	1	0	Alcohol	dehydrogenase	transcription	factor	Myb/SANT-like
VirE	PF05272.6	gi|568164990|ref|YP_008948124.1|	-	4	6.8	7.4	3.3	7.1	0.8	2.5	1	1	1	2	2	2	0	Virulence-associated	protein	E
PKK	PF12474.3	gi|568164990|ref|YP_008948124.1|	-	4.2	7.1	22.5	1.6	8.4	12.6	2.1	1	1	1	2	2	2	0	Polo	kinase	kinase
V-ATPase_G	PF03179.10	gi|568164990|ref|YP_008948124.1|	-	4.5	7.6	16.5	8.3	6.7	3.0	2.6	1	1	1	2	2	2	0	Vacuolar	(H+)-ATPase	G	subunit
TipAS	PF07739.8	gi|568164990|ref|YP_008948124.1|	-	4.6	7.5	6.1	2.4	8.5	0.9	2.4	1	1	1	2	2	2	0	TipAS	antibiotic-recognition	domain
ATP-synt_B	PF00430.13	gi|568164990|ref|YP_008948124.1|	-	5.6	6.7	17.3	7	6.4	5.8	2.5	1	1	1	2	2	2	0	ATP	synthase	B/B'	CF(0)
CENP-Q	PF13094.1	gi|568164990|ref|YP_008948124.1|	-	5.7	6.9	23.6	5.9	6.8	7.3	2.4	1	1	1	2	2	2	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
Baculo_p24	PF05073.7	gi|568164990|ref|YP_008948124.1|	-	5.9	6.4	11.4	20	4.6	7.9	1.9	1	1	0	1	1	1	0	Baculovirus	P24	capsid	protein
Fzo_mitofusin	PF04799.8	gi|568164990|ref|YP_008948124.1|	-	6.3	6.1	12.4	4.3	6.6	4.3	2.5	1	1	1	2	2	2	0	fzo-like	conserved	region
HALZ	PF02183.13	gi|568164990|ref|YP_008948124.1|	-	6.6	6.5	18.0	0.54	10.0	0.1	4.9	1	1	1	3	3	3	0	Homeobox	associated	leucine	zipper
Med9	PF07544.8	gi|568164990|ref|YP_008948124.1|	-	6.6	6.5	17.0	0.29	10.8	1.0	3.5	1	1	2	3	3	3	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
HAUS6_N	PF14661.1	gi|568164990|ref|YP_008948124.1|	-	6.8	5.9	14.0	23	4.2	2.2	2.0	1	1	1	2	2	2	0	HAUS	augmin-like	complex	subunit	6	N-terminus
Mitofilin	PF09731.4	gi|568164990|ref|YP_008948124.1|	-	7.6	5.0	23.3	18	3.8	16.1	1.6	1	1	0	1	1	1	0	Mitochondrial	inner	membrane	protein
DUF2203	PF09969.4	gi|568164990|ref|YP_008948124.1|	-	9.2	6.5	11.9	15	5.8	2.0	2.5	1	1	1	2	2	2	0	Uncharacterized	conserved	protein	(DUF2203)
RRF	PF01765.14	gi|568164990|ref|YP_008948124.1|	-	9.5	5.6	26.3	1.1	8.7	8.2	2.4	1	1	1	2	2	2	0	Ribosome	recycling	factor
TMPIT	PF07851.8	gi|568164990|ref|YP_008948124.1|	-	9.6	5.1	13.6	2.6	7.0	3.0	2.1	1	1	1	2	2	2	0	TMPIT-like	protein
Atg14	PF10186.4	gi|568164990|ref|YP_008948124.1|	-	10	4.9	19.6	8.9	5.1	2.0	2.1	1	1	1	2	2	2	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
L1R_F9L	PF02442.12	gi|568164991|ref|YP_008948125.1|	-	0.034	13.6	0.2	0.049	13.0	0.1	1.2	1	0	0	1	1	1	0	Lipid	membrane	protein	of	large	eukaryotic	DNA	viruses
DUF1297	PF06973.7	gi|568164991|ref|YP_008948125.1|	-	0.097	11.9	0.0	0.13	11.5	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1297)
TrkA_N	PF02254.13	gi|568164571|ref|YP_008948126.1|	-	2.6e-17	62.9	0.3	4e-17	62.2	0.2	1.3	1	0	0	1	1	1	1	TrkA-N	domain
TrkA_C	PF02080.16	gi|568164571|ref|YP_008948126.1|	-	3.9e-06	26.3	0.1	2.3e-05	23.8	0.0	2.3	3	0	0	3	3	3	1	TrkA-C	domain
Ion_trans_2	PF07885.11	gi|568164571|ref|YP_008948126.1|	-	0.0023	17.6	8.8	0.0043	16.7	6.1	1.4	1	0	0	1	1	1	1	Ion	channel
CRISPR_Cas2	PF09827.4	gi|568164572|ref|YP_008948127.1|	-	3e-19	68.9	0.3	3.5e-19	68.7	0.2	1.1	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas2
Cas_Cas1	PF01867.11	gi|568164573|ref|YP_008948128.1|	-	5.9e-64	215.8	0.1	7.2e-64	215.5	0.1	1.0	1	0	0	1	1	1	1	CRISPR	associated	protein	Cas1
Cas_Cas4	PF01930.12	gi|568164574|ref|YP_008948129.1|	-	1.2e-21	77.2	2.4	1.4e-21	77.0	1.7	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF83
PDDEXK_1	PF12705.2	gi|568164574|ref|YP_008948129.1|	-	5.9e-06	25.8	1.2	7.3e-06	25.5	0.8	1.2	1	1	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
DUF911	PF06023.7	gi|568164575|ref|YP_008948130.1|	-	9.9e-93	310.5	0.0	1.1e-92	310.3	0.0	1.0	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF911)
HD	PF01966.17	gi|568164992|ref|YP_008948131.1|	-	0.0024	17.8	2.3	0.0086	16.0	1.5	2.2	1	1	0	1	1	1	1	HD	domain
Hydrolase_3	PF08282.7	gi|568164992|ref|YP_008948131.1|	-	0.083	12.4	1.0	0.1	12.1	0.7	1.2	1	0	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
ResIII	PF04851.10	gi|568164576|ref|YP_008948132.1|	-	1.5e-08	34.6	0.5	0.00042	20.1	0.0	3.4	4	1	0	4	4	4	2	Type	III	restriction	enzyme,	res	subunit
DEAD	PF00270.24	gi|568164576|ref|YP_008948132.1|	-	1.6e-07	30.9	0.0	1.7e-05	24.3	0.0	2.4	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|568164576|ref|YP_008948132.1|	-	0.00017	21.3	0.0	0.00042	20.1	0.0	1.7	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
Miro	PF08477.8	gi|568164576|ref|YP_008948132.1|	-	0.012	16.0	0.4	0.083	13.3	0.1	2.6	3	0	0	3	3	3	0	Miro-like	protein
CbiA	PF01656.18	gi|568164576|ref|YP_008948132.1|	-	0.014	14.7	2.3	0.093	12.1	0.1	2.3	2	0	0	2	2	2	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
DUF3798	PF12683.2	gi|568164576|ref|YP_008948132.1|	-	0.026	13.6	1.8	0.032	13.3	0.5	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3798)
Adeno_IVa2	PF02456.10	gi|568164576|ref|YP_008948132.1|	-	0.074	11.6	0.1	0.13	10.9	0.0	1.3	1	0	0	1	1	1	0	Adenovirus	IVa2	protein
Cas_Cas5d	PF09704.5	gi|568164577|ref|YP_008948135.1|	-	1e-15	57.9	0.0	1.2e-15	57.7	0.0	1.1	1	0	0	1	1	1	1	CRISPR-associated	protein	(Cas_Cas5)
DevR	PF01905.11	gi|568164578|ref|YP_008948136.1|	-	4.4e-69	232.3	0.0	5.3e-69	232.0	0.0	1.1	1	0	0	1	1	1	1	CRISPR-associated	negative	auto-regulator	DevR/Csa2
Cas_Csa5	PF09702.5	gi|568164579|ref|YP_008948137.1|	-	8.2e-06	25.8	0.1	0.0005	20.1	0.0	2.2	1	1	1	2	2	2	2	CRISPR-associated	protein	(Cas_Csa5)
Delta_lysin	PF05372.6	gi|568164580|ref|YP_008948139.1|	-	0.011	15.0	0.1	2.7	7.4	0.0	2.4	2	0	0	2	2	2	0	Delta	lysin	family
RAMPs	PF03787.10	gi|568164581|ref|YP_008948140.1|	-	1.3e-20	74.1	0.0	3.1e-20	72.9	0.0	1.6	1	1	0	1	1	1	1	RAMP	superfamily
Toxin_34	PF08396.5	gi|568164581|ref|YP_008948140.1|	-	0.013	16.0	1.8	0.02	15.4	1.3	1.3	1	0	0	1	1	1	0	Spider	toxin	omega	agatoxin/Tx1	family
gp45-slide_C	PF09116.5	gi|568164581|ref|YP_008948140.1|	-	0.12	12.3	0.1	0.24	11.4	0.0	1.5	1	0	0	1	1	1	0	gp45	sliding	clamp,	C	terminal
RAMPs	PF03787.10	gi|568164582|ref|YP_008948141.1|	-	7e-23	81.5	0.1	1.8e-22	80.2	0.0	1.7	1	1	0	1	1	1	1	RAMP	superfamily
RAMPs	PF03787.10	gi|568164583|ref|YP_008948142.1|	-	2.3e-12	47.2	0.0	5.4e-12	46.0	0.0	1.8	1	1	0	1	1	1	1	RAMP	superfamily
HD	PF01966.17	gi|568164584|ref|YP_008948143.1|	-	2.3e-10	40.5	0.1	9.3e-10	38.5	0.0	2.2	2	0	0	2	2	2	1	HD	domain
GGDN	PF05165.7	gi|568164584|ref|YP_008948143.1|	-	0.0029	16.6	0.0	1.1	8.2	0.0	2.2	2	0	0	2	2	2	2	GGDN	family
DUF3692	PF12469.3	gi|568164584|ref|YP_008948143.1|	-	0.0089	16.2	0.0	0.054	13.7	0.0	2.6	1	1	0	1	1	1	1	CRISPR-associated	protein
BAR	PF03114.13	gi|568164584|ref|YP_008948143.1|	-	0.017	14.6	1.4	0.028	13.9	0.1	2.0	2	0	0	2	2	2	0	BAR	domain
PSD2	PF07624.6	gi|568164584|ref|YP_008948143.1|	-	0.05	13.2	0.2	0.24	11.0	0.2	2.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1585)
HDOD	PF08668.7	gi|568164584|ref|YP_008948143.1|	-	0.096	11.9	0.0	0.2	10.9	0.0	1.5	1	0	0	1	1	1	0	HDOD	domain
DUF4325	PF14213.1	gi|568164584|ref|YP_008948143.1|	-	0.4	10.3	7.5	3.9	7.1	0.2	3.6	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4325)
RAMPs	PF03787.10	gi|568164585|ref|YP_008948144.1|	-	1.8e-08	34.4	0.1	1.8e-07	31.2	0.0	2.1	1	1	0	1	1	1	1	RAMP	superfamily
RAMPs	PF03787.10	gi|568164586|ref|YP_008948145.1|	-	0.00018	21.4	0.3	0.00031	20.6	0.2	1.4	1	0	0	1	1	1	1	RAMP	superfamily
Ta0938	PF11494.3	gi|568164586|ref|YP_008948145.1|	-	0.04	14.0	0.3	0.084	12.9	0.2	1.5	1	0	0	1	1	1	0	Ta0938
RAMPs	PF03787.10	gi|568164587|ref|YP_008948146.1|	-	1.3e-09	38.2	0.2	2e-09	37.6	0.2	1.3	1	0	0	1	1	1	1	RAMP	superfamily
DUF2276	PF10040.4	gi|568164588|ref|YP_008948147.1|	-	3.3e-29	101.5	0.1	7.3e-29	100.4	0.0	1.6	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2276)
Cas_Cas6	PF01881.11	gi|568164588|ref|YP_008948147.1|	-	0.76	9.9	7.3	2.3	8.4	3.0	2.8	1	1	1	2	2	2	0	CRISPR	associated	protein	Cas6
Cas_NE0113	PF09623.5	gi|568164589|ref|YP_008948148.1|	-	0.0017	17.8	0.3	0.014	14.8	0.2	2.0	1	1	0	1	1	1	1	CRISPR-associated	protein	NE0113	(Cas_NE0113)
Cas_Cas02710	PF09670.5	gi|568164589|ref|YP_008948148.1|	-	0.011	14.4	0.0	0.012	14.2	0.0	1.2	1	0	0	1	1	1	0	CRISPR-associated	protein	(Cas_Cas02710)
DUF4259	PF14078.1	gi|568164589|ref|YP_008948148.1|	-	0.037	14.5	0.0	0.059	13.8	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4259)
Sirohm_synth_M	PF14824.1	gi|568164996|ref|YP_008948149.1|	-	0.12	11.4	0.0	0.15	11.0	0.0	1.2	1	0	0	1	1	1	0	Sirohaem	biosynthesis	protein	central
AAA_16	PF13191.1	gi|568164997|ref|YP_008948150.1|	-	1.4e-06	28.4	0.0	6.5e-06	26.2	0.0	2.1	1	1	1	2	2	2	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|568164997|ref|YP_008948150.1|	-	2.6e-06	27.5	0.2	4.7e-05	23.5	0.1	2.7	2	1	0	2	2	2	1	AAA	domain
AAA_18	PF13238.1	gi|568164997|ref|YP_008948150.1|	-	7.6e-05	23.0	1.1	0.00015	22.0	0.1	2.1	2	0	0	2	2	2	1	AAA	domain
Arch_ATPase	PF01637.13	gi|568164997|ref|YP_008948150.1|	-	9.1e-05	22.2	3.0	0.00017	21.3	0.3	2.5	2	1	0	2	2	2	1	Archaeal	ATPase
ResIII	PF04851.10	gi|568164997|ref|YP_008948150.1|	-	0.0001	22.1	0.2	0.00042	20.1	0.0	2.1	2	1	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Transpep_BrtH	PF14399.1	gi|568164997|ref|YP_008948150.1|	-	0.00011	21.6	0.2	0.003	16.9	0.0	2.4	2	1	0	2	2	2	1	NlpC/p60-like	transpeptidase
AAA_14	PF13173.1	gi|568164997|ref|YP_008948150.1|	-	0.0025	17.7	1.5	0.23	11.3	0.1	3.0	2	1	1	3	3	3	1	AAA	domain
AAA	PF00004.24	gi|568164997|ref|YP_008948150.1|	-	0.01	16.0	0.8	0.13	12.4	0.2	2.8	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
Zeta_toxin	PF06414.7	gi|568164997|ref|YP_008948150.1|	-	0.039	13.0	0.0	0.1	11.6	0.0	1.7	1	0	0	1	1	1	0	Zeta	toxin
AAA_30	PF13604.1	gi|568164997|ref|YP_008948150.1|	-	0.052	13.1	0.0	0.16	11.5	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
NB-ARC	PF00931.17	gi|568164997|ref|YP_008948150.1|	-	0.061	12.1	0.1	0.093	11.5	0.0	1.4	1	0	0	1	1	1	0	NB-ARC	domain
AAA_11	PF13086.1	gi|568164997|ref|YP_008948150.1|	-	0.083	12.4	0.0	0.3	10.6	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
DUF853	PF05872.7	gi|568164997|ref|YP_008948150.1|	-	0.086	11.1	0.0	0.14	10.5	0.0	1.2	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF853)
NACHT	PF05729.7	gi|568164997|ref|YP_008948150.1|	-	0.086	12.4	0.8	0.4	10.3	0.1	2.4	2	1	0	2	2	2	0	NACHT	domain
AAA_24	PF13479.1	gi|568164997|ref|YP_008948150.1|	-	0.09	12.3	0.5	0.37	10.3	0.3	2.1	1	1	0	1	1	1	0	AAA	domain
HTH_19	PF12844.2	gi|568164590|ref|YP_008948151.1|	-	0.0033	17.4	0.8	1.1	9.4	0.0	2.5	2	0	0	2	2	2	2	Helix-turn-helix	domain
HTH_3	PF01381.17	gi|568164590|ref|YP_008948151.1|	-	0.023	14.5	0.3	4.9	7.0	0.1	2.6	2	0	0	2	2	2	0	Helix-turn-helix
TetR_N	PF00440.18	gi|568164590|ref|YP_008948151.1|	-	0.024	14.2	0.0	2.3	7.9	0.0	2.6	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	tetR	family
HTH_24	PF13412.1	gi|568164590|ref|YP_008948151.1|	-	0.028	13.8	0.2	0.068	12.5	0.2	1.7	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
HTH_Tnp_1	PF01527.15	gi|568164590|ref|YP_008948151.1|	-	0.049	13.5	0.1	2.9	7.9	0.0	3.0	3	0	0	3	3	3	0	Transposase
B-block_TFIIIC	PF04182.7	gi|568164590|ref|YP_008948151.1|	-	0.049	13.4	0.5	0.16	11.8	0.4	2.0	1	1	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
Peptidase_M16	PF00675.15	gi|568164590|ref|YP_008948151.1|	-	0.08	12.7	0.6	0.11	12.2	0.4	1.2	1	0	0	1	1	1	0	Insulinase	(Peptidase	family	M16)
hDGE_amylase	PF14701.1	gi|568164590|ref|YP_008948151.1|	-	0.13	11.1	1.5	0.16	10.8	1.1	1.1	1	0	0	1	1	1	0	glucanotransferase	domain	of	human	glycogen	debranching	enzyme
Cid2	PF09774.4	gi|568164590|ref|YP_008948151.1|	-	0.14	12.2	1.9	0.21	11.6	1.3	1.3	1	0	0	1	1	1	0	Caffeine-induced	death	protein	2
Phasin	PF05597.6	gi|568164590|ref|YP_008948151.1|	-	0.26	11.0	3.2	0.23	11.2	1.3	1.5	2	0	0	2	2	2	0	Poly(hydroxyalcanoate)	granule	associated	protein	(phasin)
PIN	PF01850.16	gi|568164591|ref|YP_008948153.1|	-	4e-06	27.1	0.1	4.9e-06	26.8	0.1	1.1	1	0	0	1	1	1	1	PIN	domain
PIN_2	PF10130.4	gi|568164591|ref|YP_008948153.1|	-	0.0072	16.3	0.0	0.0087	16.0	0.0	1.1	1	0	0	1	1	1	1	PIN	domain
DUF1512	PF07431.7	gi|568164591|ref|YP_008948153.1|	-	0.0096	14.7	0.0	0.011	14.5	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1512)
DUF3990	PF13151.1	gi|568164999|ref|YP_008948154.1|	-	0.064	12.6	0.1	0.14	11.4	0.0	1.6	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3990)
MAP2_projctn	PF08377.5	gi|568164999|ref|YP_008948154.1|	-	0.096	10.2	0.4	0.11	10.0	0.3	1.0	1	0	0	1	1	1	0	MAP2/Tau	projection	domain
TFX_C	PF14601.1	gi|568164999|ref|YP_008948154.1|	-	0.14	11.9	0.2	1.2	8.9	0.1	2.2	2	1	0	2	2	2	0	DNA_binding	protein,	TFX,	C-term
Prefoldin	PF02996.12	gi|568164999|ref|YP_008948154.1|	-	0.23	11.1	2.0	0.28	10.8	1.4	1.2	1	0	0	1	1	1	0	Prefoldin	subunit
NTS	PF15447.1	gi|568164999|ref|YP_008948154.1|	-	1.9	8.9	9.4	1.5	9.2	1.9	2.7	3	0	0	3	3	3	0	N-terminal	segments	of	PfEMP1
SRI	PF08236.6	gi|568164999|ref|YP_008948154.1|	-	8	6.4	7.6	17	5.4	0.7	2.6	2	2	0	2	2	2	0	SRI	(Set2	Rpb1	interacting)	domain
Abhydrolase_6	PF12697.2	gi|568165000|ref|YP_008948155.1|	-	0.0074	16.1	0.0	0.0098	15.7	0.0	1.2	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
TAT_signal	PF10518.4	gi|568165000|ref|YP_008948155.1|	-	0.0095	15.8	0.6	0.015	15.2	0.4	1.3	1	0	0	1	1	1	1	TAT	(twin-arginine	translocation)	pathway	signal	sequence
Rifin_STEVOR	PF02009.11	gi|568165001|ref|YP_008948156.1|	-	0.0002	21.1	9.0	0.00033	20.3	6.2	1.4	1	0	0	1	1	1	1	Rifin/stevor	family
Pex24p	PF06398.6	gi|568165001|ref|YP_008948156.1|	-	0.011	14.6	3.0	0.018	13.8	2.1	1.4	1	0	0	1	1	1	0	Integral	peroxisomal	membrane	peroxin
Amnionless	PF14828.1	gi|568165001|ref|YP_008948156.1|	-	0.44	8.9	2.4	0.65	8.4	1.7	1.2	1	0	0	1	1	1	0	Amnionless
DUF3753	PF12575.3	gi|568165001|ref|YP_008948156.1|	-	10	6.0	12.0	0.029	14.1	1.4	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3753)
SCP2	PF02036.12	gi|568165003|ref|YP_008948158.1|	-	0.0024	18.1	0.0	0.0042	17.3	0.0	1.5	1	0	0	1	1	1	1	SCP-2	sterol	transfer	family
Acyl-CoA_dh_1	PF00441.19	gi|568164592|ref|YP_008948159.1|	-	1.2e-43	148.8	4.3	1.9e-43	148.1	3.0	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_N	PF02771.11	gi|568164592|ref|YP_008948159.1|	-	1.8e-30	105.8	0.1	7e-30	103.9	0.0	2.1	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|568164592|ref|YP_008948159.1|	-	1.1e-20	72.9	0.1	2.2e-20	71.9	0.0	1.5	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_2	PF08028.6	gi|568164592|ref|YP_008948159.1|	-	1.8e-19	70.3	2.7	3.3e-19	69.4	1.9	1.4	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
3HCDH_N	PF02737.13	gi|568164593|ref|YP_008948160.1|	-	1.2e-63	214.0	1.3	1.8e-63	213.4	0.9	1.3	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
ECH	PF00378.15	gi|568164593|ref|YP_008948160.1|	-	3.7e-54	183.4	0.0	6.2e-54	182.6	0.0	1.4	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
3HCDH	PF00725.17	gi|568164593|ref|YP_008948160.1|	-	9.6e-34	115.6	0.0	1.3e-23	83.2	0.0	2.6	2	0	0	2	2	2	2	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
NAD_Gly3P_dh_N	PF01210.18	gi|568164593|ref|YP_008948160.1|	-	1.7e-07	31.1	0.1	3.8e-07	29.9	0.1	1.6	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Pyr_redox	PF00070.22	gi|568164593|ref|YP_008948160.1|	-	4.4e-05	23.8	0.4	0.00019	21.7	0.2	2.2	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_2	PF03446.10	gi|568164593|ref|YP_008948160.1|	-	8.2e-05	22.4	0.1	0.00016	21.5	0.1	1.5	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
UDPG_MGDP_dh_N	PF03721.9	gi|568164593|ref|YP_008948160.1|	-	0.00058	19.2	0.4	0.0016	17.8	0.3	1.8	1	0	0	1	1	1	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
Saccharop_dh	PF03435.13	gi|568164593|ref|YP_008948160.1|	-	0.0022	17.0	0.2	0.0037	16.2	0.1	1.3	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
ECH_C	PF13766.1	gi|568164593|ref|YP_008948160.1|	-	0.003	17.7	0.0	0.0071	16.4	0.0	1.6	1	0	0	1	1	1	1	2-enoyl-CoA	Hydratase	C-terminal	region
NAD_binding_7	PF13241.1	gi|568164593|ref|YP_008948160.1|	-	0.0049	17.0	0.2	0.013	15.7	0.2	1.7	1	0	0	1	1	1	1	Putative	NAD(P)-binding
AlaDh_PNT_C	PF01262.16	gi|568164593|ref|YP_008948160.1|	-	0.0068	15.9	0.6	0.015	14.9	0.1	1.7	2	0	0	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
TrkA_N	PF02254.13	gi|568164593|ref|YP_008948160.1|	-	0.0097	15.8	0.2	0.056	13.4	0.2	2.4	1	0	0	1	1	1	1	TrkA-N	domain
F420_oxidored	PF03807.12	gi|568164593|ref|YP_008948160.1|	-	0.016	15.6	0.3	0.088	13.2	0.2	2.3	2	1	0	2	2	1	0	NADP	oxidoreductase	coenzyme	F420-dependent
ThiF	PF00899.16	gi|568164593|ref|YP_008948160.1|	-	0.092	12.5	0.8	44	3.8	2.1	2.9	2	1	0	2	2	2	0	ThiF	family
Ribonuc_red_lgN	PF00317.16	gi|568164593|ref|YP_008948160.1|	-	0.17	11.6	0.0	0.63	9.8	0.0	2.0	2	0	0	2	2	2	0	Ribonucleotide	reductase,	all-alpha	domain
SCP2	PF02036.12	gi|568164594|ref|YP_008948161.1|	-	0.0087	16.3	0.0	0.014	15.6	0.0	1.4	1	0	0	1	1	1	1	SCP-2	sterol	transfer	family
Ribonuc_red_sm	PF00268.16	gi|568165004|ref|YP_008948162.1|	-	3.5e-05	22.9	2.8	0.00019	20.5	1.9	2.0	1	1	0	1	1	1	1	Ribonucleotide	reductase,	small	chain
Rubrerythrin	PF02915.12	gi|568165004|ref|YP_008948162.1|	-	0.019	15.3	0.5	0.62	10.3	0.1	2.4	2	0	0	2	2	2	0	Rubrerythrin
Haem_oxygenas_2	PF14518.1	gi|568165004|ref|YP_008948162.1|	-	0.021	14.9	0.1	0.23	11.6	0.0	2.3	1	1	1	2	2	2	0	Iron-containing	redox	enzyme
DUF973	PF06157.6	gi|568165005|ref|YP_008948163.1|	-	4.6e-06	25.8	22.2	5.8e-06	25.4	15.4	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF973)
TraL	PF07178.6	gi|568165005|ref|YP_008948163.1|	-	1.9	8.5	5.1	4.5	7.3	0.4	2.6	2	0	0	2	2	2	0	TraL	protein
COXG	PF06240.8	gi|568165006|ref|YP_008948164.1|	-	3.3e-08	33.3	0.0	3.8e-08	33.1	0.0	1.1	1	0	0	1	1	1	1	Carbon	monoxide	dehydrogenase	subunit	G	(CoxG)
ADH_N	PF08240.7	gi|568164595|ref|YP_008948165.1|	-	7.4e-31	106.1	0.5	1.3e-30	105.3	0.3	1.4	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|568164595|ref|YP_008948165.1|	-	3e-24	85.0	0.0	5.3e-24	84.2	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|568164595|ref|YP_008948165.1|	-	1.9e-05	25.5	0.0	4.6e-05	24.3	0.0	1.6	2	0	0	2	2	2	1	Zinc-binding	dehydrogenase
AlaDh_PNT_C	PF01262.16	gi|568164595|ref|YP_008948165.1|	-	0.00072	19.1	2.9	0.0025	17.3	0.4	2.1	1	1	1	2	2	2	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
2-Hacid_dh_C	PF02826.14	gi|568164595|ref|YP_008948165.1|	-	0.0071	15.5	0.2	0.014	14.5	0.1	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
ELFV_dehydrog	PF00208.16	gi|568164595|ref|YP_008948165.1|	-	0.051	13.1	0.8	0.64	9.5	0.2	2.1	2	0	0	2	2	2	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
ThiF	PF00899.16	gi|568164595|ref|YP_008948165.1|	-	0.15	11.8	2.4	0.64	9.8	1.5	1.9	1	1	1	2	2	2	0	ThiF	family
Peptidase_C25_C	PF03785.9	gi|568164595|ref|YP_008948165.1|	-	0.6	9.9	4.5	2.9	7.7	0.9	2.3	2	0	0	2	2	2	0	Peptidase	family	C25,	C	terminal	ig-like	domain
AMP-binding	PF00501.23	gi|568164596|ref|YP_008948166.1|	-	7e-88	294.8	0.0	8.7e-88	294.4	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|568164596|ref|YP_008948166.1|	-	1.5e-15	57.8	0.0	2.9e-15	56.9	0.0	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
COXG	PF06240.8	gi|568165007|ref|YP_008948167.1|	-	2.7e-17	62.7	0.5	3.1e-17	62.5	0.3	1.0	1	0	0	1	1	1	1	Carbon	monoxide	dehydrogenase	subunit	G	(CoxG)
AhpC-TSA	PF00578.16	gi|568164597|ref|YP_008948168.1|	-	3.9e-34	117.0	0.0	4.7e-34	116.7	0.0	1.1	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|568164597|ref|YP_008948168.1|	-	1.1e-20	73.6	0.0	1.2e-20	73.4	0.0	1.0	1	0	0	1	1	1	1	Redoxin
DUF899	PF05988.7	gi|568164597|ref|YP_008948168.1|	-	0.00074	19.0	0.0	0.00077	18.9	0.0	1.1	1	0	0	1	1	1	1	Bacterial	protein	of	unknown	function	(DUF899)
Thioredoxin_8	PF13905.1	gi|568164597|ref|YP_008948168.1|	-	0.014	15.5	0.1	0.026	14.6	0.1	1.5	1	0	0	1	1	1	0	Thioredoxin-like
AhpC-TSA_2	PF13911.1	gi|568164597|ref|YP_008948168.1|	-	0.085	12.7	0.0	0.14	12.0	0.0	1.4	1	1	0	1	1	1	0	AhpC/TSA	antioxidant	enzyme
POR	PF01558.13	gi|568164598|ref|YP_008948169.1|	-	6.3e-33	114.1	0.5	7.5e-33	113.8	0.3	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
DUF4530	PF15039.1	gi|568164598|ref|YP_008948169.1|	-	0.036	13.9	0.1	0.25	11.2	0.0	2.2	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4530)
TPP_enzyme_C	PF02775.16	gi|568164599|ref|YP_008948170.1|	-	2.9e-20	72.3	0.0	5.9e-20	71.3	0.0	1.6	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
POR_N	PF01855.14	gi|568164599|ref|YP_008948170.1|	-	2.3e-14	53.4	0.1	8.2e-14	51.6	0.0	1.8	2	0	0	2	2	2	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Fer4_10	PF13237.1	gi|568164599|ref|YP_008948170.1|	-	1.5e-09	37.4	11.9	2.9e-09	36.5	8.2	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|568164599|ref|YP_008948170.1|	-	1.7e-09	37.9	22.7	1.8e-06	28.2	8.3	2.4	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|568164599|ref|YP_008948170.1|	-	2e-09	36.6	15.2	2.2e-07	30.1	4.1	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
TPP_enzyme_N	PF02776.13	gi|568164599|ref|YP_008948170.1|	-	1.9e-08	34.0	0.1	3.9e-05	23.2	0.0	2.3	2	0	0	2	2	2	2	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
Fer4_2	PF12797.2	gi|568164599|ref|YP_008948170.1|	-	1.3e-07	31.0	15.3	5.7e-06	25.9	2.8	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|568164599|ref|YP_008948170.1|	-	9.8e-07	28.3	22.3	2.5e-05	23.9	3.6	2.9	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|568164599|ref|YP_008948170.1|	-	1.2e-05	25.4	12.2	3.4e-05	24.0	8.4	1.8	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|568164599|ref|YP_008948170.1|	-	2.5e-05	24.1	20.5	0.00025	20.9	7.3	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Transketolase_C	PF02780.15	gi|568164599|ref|YP_008948170.1|	-	5.3e-05	23.1	0.6	0.0012	18.7	0.0	3.0	4	0	0	4	4	3	1	Transketolase,	C-terminal	domain
Fer4_21	PF14697.1	gi|568164599|ref|YP_008948170.1|	-	0.0001	22.0	12.1	0.00027	20.7	7.9	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|568164599|ref|YP_008948170.1|	-	0.0016	19.1	11.5	0.0073	17.0	1.4	2.6	1	1	3	4	4	4	2	4Fe-4S	double	cluster	binding	domain
Fer4_17	PF13534.1	gi|568164599|ref|YP_008948170.1|	-	0.0018	18.6	8.9	0.027	14.8	1.3	2.5	1	1	2	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|568164599|ref|YP_008948170.1|	-	0.0044	17.2	3.8	0.0044	17.2	2.6	2.7	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|568164599|ref|YP_008948170.1|	-	0.006	17.0	7.5	0.006	17.0	5.2	3.1	3	0	0	3	3	3	1	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|568164599|ref|YP_008948170.1|	-	0.039	14.3	12.3	0.046	14.1	2.7	2.7	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|568164599|ref|YP_008948170.1|	-	0.14	12.7	14.4	0.14	12.7	2.0	2.8	2	1	1	3	3	2	0	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.1	gi|568164599|ref|YP_008948170.1|	-	1.2	9.6	14.7	3.6	8.0	3.0	2.8	1	1	1	2	2	2	0	4Fe-4S	single	cluster	domain
DUF35_N	PF12172.3	gi|568164600|ref|YP_008948171.1|	-	2.1e-09	37.0	0.0	3.3e-09	36.3	0.0	1.3	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF35	PF01796.12	gi|568164600|ref|YP_008948171.1|	-	0.00062	19.9	0.0	0.00089	19.4	0.0	1.3	1	0	0	1	1	1	1	DUF35	OB-fold	domain
DZR	PF12773.2	gi|568164600|ref|YP_008948171.1|	-	0.074	12.8	0.1	0.22	11.3	0.1	1.8	2	0	0	2	2	2	0	Double	zinc	ribbon
DUF35_N	PF12172.3	gi|568164601|ref|YP_008948172.1|	-	2.8e-07	30.2	0.1	5.3e-07	29.3	0.1	1.4	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF35	PF01796.12	gi|568164601|ref|YP_008948172.1|	-	0.00039	20.5	0.1	0.00058	20.0	0.1	1.3	1	0	0	1	1	1	1	DUF35	OB-fold	domain
Thiolase_C	PF02803.13	gi|568164602|ref|YP_008948173.1|	-	0.001	18.4	0.0	0.91	8.9	0.0	2.5	2	0	0	2	2	2	2	Thiolase,	C-terminal	domain
Thiolase_N	PF00108.18	gi|568164602|ref|YP_008948173.1|	-	0.011	14.7	0.1	0.34	9.8	0.0	2.2	2	0	0	2	2	2	0	Thiolase,	N-terminal	domain
ACP_syn_III	PF08545.5	gi|568164602|ref|YP_008948173.1|	-	0.084	12.5	0.0	1.7	8.3	0.0	2.3	2	0	0	2	2	2	0	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Acyl-CoA_dh_1	PF00441.19	gi|568164604|ref|YP_008948175.1|	-	3.9e-42	143.8	0.1	6.8e-42	143.1	0.0	1.3	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
Acyl-CoA_dh_M	PF02770.14	gi|568164604|ref|YP_008948175.1|	-	3.7e-19	67.9	0.6	8e-19	66.8	0.1	1.8	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	middle	domain
Acyl-CoA_dh_N	PF02771.11	gi|568164604|ref|YP_008948175.1|	-	4.3e-15	56.2	0.0	1.1e-14	54.9	0.0	1.7	1	0	0	1	1	1	1	Acyl-CoA	dehydrogenase,	N-terminal	domain
Acyl-CoA_dh_2	PF08028.6	gi|568164604|ref|YP_008948175.1|	-	5.8e-13	49.2	0.0	7.2e-12	45.7	0.0	2.2	2	0	0	2	2	2	1	Acyl-CoA	dehydrogenase,	C-terminal	domain
AMP-binding	PF00501.23	gi|568164605|ref|YP_008948176.1|	-	2.7e-76	256.6	0.0	3.2e-76	256.3	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|568164605|ref|YP_008948176.1|	-	8e-13	49.1	0.0	1.6e-11	44.9	0.0	2.4	2	0	0	2	2	2	1	AMP-binding	enzyme	C-terminal	domain
CRISPR_Cas2	PF09827.4	gi|568164605|ref|YP_008948176.1|	-	0.091	12.9	0.0	0.49	10.5	0.0	2.1	2	0	0	2	2	2	0	CRISPR	associated	protein	Cas2
HTH_IclR	PF09339.5	gi|568164606|ref|YP_008948177.1|	-	2.7e-10	39.6	0.0	4.4e-10	38.9	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_24	PF13412.1	gi|568164606|ref|YP_008948177.1|	-	3.3e-07	29.5	0.2	7e-07	28.5	0.2	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.14	gi|568164606|ref|YP_008948177.1|	-	6.2e-07	29.0	1.0	1.3e-06	27.9	0.2	1.8	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|568164606|ref|YP_008948177.1|	-	4.7e-06	26.1	0.0	1e-05	25.1	0.0	1.5	1	0	0	1	1	1	1	MarR	family
HTH_20	PF12840.2	gi|568164606|ref|YP_008948177.1|	-	5.4e-06	26.1	0.0	9.7e-06	25.2	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_27	PF13463.1	gi|568164606|ref|YP_008948177.1|	-	6.4e-06	26.4	0.1	1.2e-05	25.5	0.1	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_28	PF13518.1	gi|568164606|ref|YP_008948177.1|	-	0.0008	19.3	0.1	0.0015	18.4	0.1	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|568164606|ref|YP_008948177.1|	-	0.0013	18.3	0.0	0.0023	17.5	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_23	PF13384.1	gi|568164606|ref|YP_008948177.1|	-	0.0035	16.9	0.0	0.0064	16.1	0.0	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_45	PF14947.1	gi|568164606|ref|YP_008948177.1|	-	0.0071	16.1	0.0	0.02	14.6	0.0	1.7	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_36	PF13730.1	gi|568164606|ref|YP_008948177.1|	-	0.0073	16.4	0.0	0.017	15.2	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
Phage_AlpA	PF05930.7	gi|568164606|ref|YP_008948177.1|	-	0.016	14.8	0.0	0.04	13.6	0.0	1.6	1	0	0	1	1	1	0	Prophage	CP4-57	regulatory	protein	(AlpA)
DUF1312	PF07009.6	gi|568164606|ref|YP_008948177.1|	-	0.017	14.9	2.7	3	7.6	0.1	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1312)
HTH_8	PF02954.14	gi|568164606|ref|YP_008948177.1|	-	0.018	14.5	0.3	0.031	13.8	0.2	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	Fis	family
HTH_29	PF13551.1	gi|568164606|ref|YP_008948177.1|	-	0.081	13.0	0.1	0.14	12.2	0.0	1.3	1	0	0	1	1	1	0	Winged	helix-turn	helix
DUF1180	PF06679.7	gi|568164606|ref|YP_008948177.1|	-	0.12	12.2	0.3	0.22	11.3	0.2	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1180)
SPRY	PF00622.23	gi|568164607|ref|YP_008948178.1|	-	0.11	12.6	0.0	0.14	12.2	0.0	1.2	1	0	0	1	1	1	0	SPRY	domain
DUF1628	PF07790.6	gi|568165008|ref|YP_008948179.1|	-	0.032	14.9	0.9	0.07	13.8	0.2	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1628)
Adeno_E3_14_5	PF04834.7	gi|568165008|ref|YP_008948179.1|	-	0.036	14.4	0.2	0.066	13.6	0.2	1.5	1	0	0	1	1	1	0	Early	E3	14.5	kDa	protein
Inp1	PF12634.2	gi|568165008|ref|YP_008948179.1|	-	0.95	9.1	5.2	2.4	7.8	3.3	2.0	1	1	0	1	1	1	0	Inheritance	of	peroxisomes	protein	1
Zip	PF02535.17	gi|568164608|ref|YP_008948180.1|	-	0.00014	21.0	6.7	0.00014	21.0	4.6	2.8	2	1	0	3	3	3	2	ZIP	Zinc	transporter
Flavin_Reduct	PF01613.13	gi|568164609|ref|YP_008948181.1|	-	7.1e-31	107.1	0.0	7.9e-31	106.9	0.0	1.0	1	0	0	1	1	1	1	Flavin	reductase	like	domain
DUF447	PF04289.7	gi|568164609|ref|YP_008948181.1|	-	0.0048	16.4	0.0	0.0066	16.0	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF447)
LigB	PF02900.13	gi|568164610|ref|YP_008948182.1|	-	3.2e-53	180.4	0.0	3.5e-53	180.3	0.0	1.0	1	0	0	1	1	1	1	Catalytic	LigB	subunit	of	aromatic	ring-opening	dioxygenase
Memo	PF01875.12	gi|568164610|ref|YP_008948182.1|	-	0.0031	16.4	0.0	0.0086	14.9	0.0	1.7	1	1	1	2	2	2	1	Memo-like	protein
Ta0938	PF11494.3	gi|568164611|ref|YP_008948183.1|	-	1.4e-59	198.7	5.1	1.5e-59	198.6	3.5	1.0	1	0	0	1	1	1	1	Ta0938
YHS	PF04945.8	gi|568164611|ref|YP_008948183.1|	-	0.079	12.8	0.8	0.14	12.0	0.5	1.4	1	0	0	1	1	1	0	YHS	domain
Phostensin	PF13914.1	gi|568164611|ref|YP_008948183.1|	-	0.13	12.3	0.0	0.17	11.9	0.0	1.1	1	0	0	1	1	1	0	Phostensin	PP1-binding	and	SH3-binding	region
zf-H2C2_2	PF13465.1	gi|568164611|ref|YP_008948183.1|	-	0.33	11.3	0.2	0.33	11.3	0.1	1.8	2	0	0	2	2	2	0	Zinc-finger	double	domain
TENA_THI-4	PF03070.11	gi|568164612|ref|YP_008948184.1|	-	6.6e-37	127.2	0.1	9.1e-37	126.8	0.1	1.1	1	0	0	1	1	1	1	TENA/THI-4/PQQC	family
Haem_oxygenas_2	PF14518.1	gi|568164612|ref|YP_008948184.1|	-	0.0052	16.9	0.0	0.015	15.4	0.0	1.8	1	0	0	1	1	1	1	Iron-containing	redox	enzyme
zf-C2H2	PF00096.21	gi|568164612|ref|YP_008948184.1|	-	0.12	12.7	0.0	0.3	11.5	0.0	1.7	1	0	0	1	1	1	0	Zinc	finger,	C2H2	type
Amidohydro_2	PF04909.9	gi|568164613|ref|YP_008948185.1|	-	3.6e-38	131.6	0.0	4.3e-38	131.4	0.0	1.1	1	0	0	1	1	1	1	Amidohydrolase
TatD_DNase	PF01026.16	gi|568164613|ref|YP_008948185.1|	-	0.018	14.2	0.0	0.05	12.8	0.0	1.7	1	1	0	1	1	1	0	TatD	related	DNase
Amidohydro_2	PF04909.9	gi|568164614|ref|YP_008948186.1|	-	3.9e-44	151.2	0.1	8e-44	150.2	0.1	1.5	1	1	0	1	1	1	1	Amidohydrolase
D-ser_dehydrat	PF14031.1	gi|568164614|ref|YP_008948186.1|	-	0.088	13.0	0.0	0.15	12.2	0.0	1.4	1	0	0	1	1	1	0	Putative	serine	dehydratase	domain
Fer2_2	PF01799.15	gi|568164615|ref|YP_008948187.1|	-	4.3e-21	74.5	0.3	4.3e-21	74.5	0.2	1.6	2	0	0	2	2	2	1	[2Fe-2S]	binding	domain
Fer2	PF00111.22	gi|568164615|ref|YP_008948187.1|	-	3.2e-06	26.7	0.1	3.2e-06	26.7	0.1	2.0	2	1	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer2_3	PF13085.1	gi|568164615|ref|YP_008948187.1|	-	8.8e-06	25.5	1.1	8.8e-06	25.5	0.7	1.6	1	1	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
DUF3133	PF11331.3	gi|568164615|ref|YP_008948187.1|	-	0.22	11.1	1.6	3.9	7.1	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3133)
Ald_Xan_dh_C2	PF02738.13	gi|568164616|ref|YP_008948188.1|	-	1.2e-93	314.2	0.0	1.8e-93	313.7	0.0	1.2	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|568164616|ref|YP_008948188.1|	-	7.8e-12	45.2	0.0	1.4e-11	44.4	0.0	1.5	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
GerA	PF03323.8	gi|568164617|ref|YP_008948189.1|	-	0.13	10.3	0.5	0.15	10.1	0.4	1.0	1	0	0	1	1	1	0	Bacillus/Clostridium	GerA	spore	germination	protein
Ribosomal_L36e	PF01158.13	gi|568164617|ref|YP_008948189.1|	-	0.28	11.1	1.3	1.4	8.9	0.1	2.1	1	1	1	2	2	2	0	Ribosomal	protein	L36e
Fer4_11	PF13247.1	gi|568164618|ref|YP_008948190.1|	-	2.9e-22	78.3	13.4	4.2e-22	77.8	6.7	2.1	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|568164618|ref|YP_008948190.1|	-	1.2e-13	51.1	26.2	2.9e-08	33.9	5.1	2.8	2	2	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|568164618|ref|YP_008948190.1|	-	3.1e-13	48.9	36.7	3e-07	29.9	1.4	4.5	4	1	0	4	4	4	4	4Fe-4S	binding	domain
Fer4	PF00037.22	gi|568164618|ref|YP_008948190.1|	-	4e-12	45.2	40.2	1.4e-07	30.8	2.1	5.2	6	0	0	6	6	5	4	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|568164618|ref|YP_008948190.1|	-	1.8e-09	37.6	28.0	7.7e-06	26.0	5.1	3.3	1	1	4	5	5	5	5	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|568164618|ref|YP_008948190.1|	-	4.8e-09	35.6	30.8	3.6e-05	23.4	1.7	4.4	4	0	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|568164618|ref|YP_008948190.1|	-	1.2e-07	31.4	32.5	3.5e-05	23.5	6.4	3.3	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|568164618|ref|YP_008948190.1|	-	2e-06	27.9	42.5	0.0019	18.6	2.1	4.2	4	0	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|568164618|ref|YP_008948190.1|	-	3.6e-06	26.8	34.8	0.0016	18.6	1.7	4.5	4	1	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|568164618|ref|YP_008948190.1|	-	6.4e-06	25.9	27.2	0.00049	19.8	7.4	3.1	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|568164618|ref|YP_008948190.1|	-	0.00011	22.1	27.4	0.039	13.9	5.7	3.2	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
DmsC	PF04976.7	gi|568164618|ref|YP_008948190.1|	-	0.00034	19.9	9.2	0.00044	19.5	1.3	2.3	1	1	1	2	2	2	1	DMSO	reductase	anchor	subunit	(DmsC)
Fer4_16	PF13484.1	gi|568164618|ref|YP_008948190.1|	-	0.0015	19.1	32.2	0.45	11.2	0.1	4.6	3	2	1	4	4	4	2	4Fe-4S	double	cluster	binding	domain
Fer4_18	PF13746.1	gi|568164618|ref|YP_008948190.1|	-	0.016	15.6	22.6	0.25	11.7	1.8	4.4	3	1	1	4	4	4	0	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|568164618|ref|YP_008948190.1|	-	0.056	13.7	26.1	2.6	8.4	0.3	4.4	2	1	3	5	5	5	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|568164618|ref|YP_008948190.1|	-	0.067	13.7	20.8	0.12	12.9	0.4	3.5	3	1	0	3	3	2	0	4Fe-4S	single	cluster	domain
POR	PF01558.13	gi|568164619|ref|YP_008948191.1|	-	7.4e-34	117.1	0.0	9.7e-34	116.7	0.0	1.1	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
Fer4	PF00037.22	gi|568164620|ref|YP_008948192.1|	-	5.9e-16	57.3	14.3	1e-08	34.4	2.9	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|568164620|ref|YP_008948192.1|	-	2.5e-13	49.5	19.8	6e-10	38.7	7.3	1.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|568164620|ref|YP_008948192.1|	-	9.6e-13	47.3	13.2	1.4e-06	27.9	2.5	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|568164620|ref|YP_008948192.1|	-	8e-12	44.8	8.9	1.2e-11	44.3	6.2	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|568164620|ref|YP_008948192.1|	-	9.2e-12	44.1	13.8	3.8e-07	29.6	2.0	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|568164620|ref|YP_008948192.1|	-	1.9e-10	40.9	12.5	2.7e-10	40.4	8.6	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|568164620|ref|YP_008948192.1|	-	6.4e-08	32.7	13.3	9.1e-08	32.2	9.3	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|568164620|ref|YP_008948192.1|	-	1.9e-07	31.4	6.4	0.0014	19.0	0.1	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|568164620|ref|YP_008948192.1|	-	2.5e-07	31.3	9.6	0.00053	20.6	1.3	2.2	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.2	gi|568164620|ref|YP_008948192.1|	-	5.7e-07	29.3	13.6	0.0014	18.7	1.4	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|568164620|ref|YP_008948192.1|	-	3e-06	27.6	10.4	0.0048	17.4	0.2	2.7	2	1	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.1	gi|568164620|ref|YP_008948192.1|	-	7.4e-06	26.2	8.5	0.0032	17.8	0.5	2.2	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_17	PF13534.1	gi|568164620|ref|YP_008948192.1|	-	1.6e-05	25.1	5.9	0.02	15.2	0.1	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|568164620|ref|YP_008948192.1|	-	2.1e-05	24.4	14.0	0.00048	20.0	9.9	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|568164620|ref|YP_008948192.1|	-	0.0061	17.0	17.8	0.026	15.0	4.7	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_11	PF13247.1	gi|568164620|ref|YP_008948192.1|	-	0.012	15.4	5.2	0.017	15.0	3.6	1.3	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
POR_N	PF01855.14	gi|568164621|ref|YP_008948193.1|	-	8.7e-69	231.5	0.2	1.1e-68	231.1	0.1	1.1	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Transketolase_C	PF02780.15	gi|568164621|ref|YP_008948193.1|	-	3.8e-06	26.8	0.0	9e-06	25.6	0.0	1.6	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
TPP_enzyme_N	PF02776.13	gi|568164621|ref|YP_008948193.1|	-	1.3e-05	24.7	0.2	0.00021	20.8	0.3	2.1	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
PALP	PF00291.20	gi|568164621|ref|YP_008948193.1|	-	0.029	13.6	0.2	0.043	13.0	0.1	1.2	1	0	0	1	1	1	0	Pyridoxal-phosphate	dependent	enzyme
TPP_enzyme_C	PF02775.16	gi|568164622|ref|YP_008948194.1|	-	2.9e-23	82.1	0.2	4.2e-23	81.5	0.1	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
DXP_synthase_N	PF13292.1	gi|568164622|ref|YP_008948194.1|	-	0.00016	20.7	0.6	0.00057	18.9	0.3	1.8	1	1	1	2	2	2	1	1-deoxy-D-xylulose-5-phosphate	synthase
E1_dh	PF00676.15	gi|568164622|ref|YP_008948194.1|	-	0.00027	19.7	0.4	0.0004	19.1	0.3	1.2	1	0	0	1	1	1	1	Dehydrogenase	E1	component
Aldo_ket_red	PF00248.16	gi|568164623|ref|YP_008948195.1|	-	3.4e-65	219.6	0.0	3.9e-65	219.4	0.0	1.0	1	0	0	1	1	1	1	Aldo/keto	reductase	family
TPP_enzyme_N	PF02776.13	gi|568164624|ref|YP_008948196.1|	-	3.8e-44	150.2	0.0	7.9e-42	142.6	0.0	2.2	2	0	0	2	2	2	2	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|568164624|ref|YP_008948196.1|	-	3.1e-34	117.7	0.4	3.6e-33	114.3	0.0	2.4	2	1	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.17	gi|568164624|ref|YP_008948196.1|	-	7.2e-22	77.6	0.0	1.9e-21	76.2	0.0	1.8	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
CW_binding_2	PF04122.7	gi|568164624|ref|YP_008948196.1|	-	0.0032	17.6	0.0	0.25	11.5	0.0	2.7	2	0	0	2	2	2	1	Putative	cell	wall	binding	repeat	2
DXP_synthase_N	PF13292.1	gi|568164624|ref|YP_008948196.1|	-	0.025	13.4	0.0	0.061	12.2	0.0	1.6	1	0	0	1	1	1	0	1-deoxy-D-xylulose-5-phosphate	synthase
DUF1404	PF07185.6	gi|568164625|ref|YP_008948197.1|	-	5.3e-64	214.8	21.8	6.1e-64	214.6	15.1	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1404)
DUF3681	PF12442.3	gi|568164627|ref|YP_008948199.1|	-	0.035	14.2	0.5	0.073	13.2	0.2	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3681)
DUF389	PF04087.9	gi|568164627|ref|YP_008948199.1|	-	0.039	13.8	2.1	0.057	13.3	1.5	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF389)
DUF2422	PF10337.4	gi|568164627|ref|YP_008948199.1|	-	2.2	6.9	8.5	3.8	6.1	5.8	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2422)
COX2	PF00116.15	gi|568164628|ref|YP_008948200.1|	-	1.3e-19	70.2	0.3	3.4e-18	65.6	0.2	2.1	1	1	0	1	1	1	1	Cytochrome	C	oxidase	subunit	II,	periplasmic	domain
Cupredoxin_1	PF13473.1	gi|568164628|ref|YP_008948200.1|	-	4.9e-06	26.3	0.0	7.3e-06	25.8	0.0	1.4	1	1	0	1	1	1	1	Cupredoxin-like	domain
Cytochrom_B_N_2	PF13631.1	gi|568164629|ref|YP_008948201.1|	-	9.7e-30	103.5	9.0	9.7e-30	103.5	6.3	2.6	3	1	0	3	3	3	1	Cytochrome	b(N-terminal)/b6/petB
Cytochrom_B_N	PF00033.14	gi|568164629|ref|YP_008948201.1|	-	5.6e-08	32.3	11.4	5.6e-08	32.3	7.9	2.9	3	1	0	3	3	3	1	Cytochrome	b(N-terminal)/b6/petB
Cytochrom_B_C	PF00032.12	gi|568164629|ref|YP_008948201.1|	-	7.9e-05	22.8	1.1	7.9e-05	22.8	0.8	3.7	4	1	0	4	4	4	1	Cytochrome	b(C-terminal)/b6/petD
DUF4405	PF14358.1	gi|568164629|ref|YP_008948201.1|	-	0.048	13.8	0.7	0.048	13.8	0.5	4.2	4	0	0	4	4	4	0	Domain	of	unknown	function	(DUF4405)
Ni_hydr_CYTB	PF01292.15	gi|568164629|ref|YP_008948201.1|	-	6.4	6.1	25.4	0.055	12.8	2.7	3.6	2	2	0	3	3	3	0	Prokaryotic	cytochrome	b561
Rieske	PF00355.21	gi|568164630|ref|YP_008948202.1|	-	6.8e-18	64.0	0.0	1.1e-17	63.3	0.0	1.3	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
SoxE	PF06525.6	gi|568164631|ref|YP_008948203.1|	-	7.8e-77	256.9	17.9	9.2e-77	256.7	12.4	1.0	1	0	0	1	1	1	1	Sulfocyanin	(SoxE)
Cu-oxidase_2	PF07731.9	gi|568164631|ref|YP_008948203.1|	-	0.0086	15.5	0.7	0.51	9.8	0.1	2.3	2	0	0	2	2	2	2	Multicopper	oxidase
Copper-bind	PF00127.15	gi|568164631|ref|YP_008948203.1|	-	0.019	15.1	0.0	0.042	14.0	0.0	1.6	1	1	0	1	1	1	0	Copper	binding	proteins,	plastocyanin/azurin	family
Tautomerase	PF01361.16	gi|568165009|ref|YP_008948204.1|	-	0.12	12.0	0.0	0.13	11.9	0.0	1.1	1	0	0	1	1	1	0	Tautomerase	enzyme
COX1	PF00115.15	gi|568164632|ref|YP_008948205.1|	-	6.4e-138	460.1	54.0	6.4e-138	460.1	37.5	2.6	2	1	0	2	2	2	1	Cytochrome	C	and	Quinol	oxidase	polypeptide	I
COX3	PF00510.13	gi|568164632|ref|YP_008948205.1|	-	4.4e-18	65.6	16.7	4.4e-18	65.6	11.6	2.3	2	0	0	2	2	2	1	Cytochrome	c	oxidase	subunit	III
RNA_pol_Rpc34	PF05158.7	gi|568164634|ref|YP_008948207.1|	-	5.2e-05	22.5	0.1	5.5e-05	22.5	0.1	1.0	1	0	0	1	1	1	1	RNA	polymerase	Rpc34	subunit
TrmB	PF01978.14	gi|568164634|ref|YP_008948207.1|	-	0.00062	19.4	1.3	0.0014	18.3	0.9	1.6	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HxlR	PF01638.12	gi|568164634|ref|YP_008948207.1|	-	0.002	17.7	0.8	0.0023	17.5	0.5	1.1	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_34	PF13601.1	gi|568164634|ref|YP_008948207.1|	-	0.0021	18.0	0.0	0.0026	17.7	0.0	1.1	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
TFIIE_alpha	PF02002.12	gi|568164634|ref|YP_008948207.1|	-	0.003	17.0	0.3	0.0033	16.9	0.2	1.1	1	0	0	1	1	1	1	TFIIE	alpha	subunit
HTH_24	PF13412.1	gi|568164634|ref|YP_008948207.1|	-	0.0046	16.3	0.8	0.0066	15.8	0.6	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_20	PF12840.2	gi|568164634|ref|YP_008948207.1|	-	0.0084	15.8	0.1	0.011	15.5	0.1	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_36	PF13730.1	gi|568164634|ref|YP_008948207.1|	-	0.0096	16.0	0.2	0.016	15.2	0.2	1.4	1	1	0	1	1	1	1	Helix-turn-helix	domain
MarR_2	PF12802.2	gi|568164634|ref|YP_008948207.1|	-	0.028	14.0	0.0	0.032	13.8	0.0	1.1	1	0	0	1	1	1	0	MarR	family
HTH_5	PF01022.15	gi|568164634|ref|YP_008948207.1|	-	0.045	13.4	0.4	0.067	12.8	0.1	1.5	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
HTH_43	PF09904.4	gi|568164634|ref|YP_008948207.1|	-	0.099	12.4	0.1	0.12	12.1	0.1	1.2	1	0	0	1	1	1	0	Winged	helix-turn	helix
HTH_11	PF08279.7	gi|568164634|ref|YP_008948207.1|	-	0.16	11.6	0.6	0.22	11.1	0.4	1.1	1	0	0	1	1	1	0	HTH	domain
Rhodanese	PF00581.15	gi|568164635|ref|YP_008948208.1|	-	6.1e-12	45.8	0.0	1e-11	45.2	0.0	1.3	1	0	0	1	1	1	1	Rhodanese-like	domain
Ste5_C	PF12194.3	gi|568164636|ref|YP_008948209.1|	-	0.055	13.1	0.0	0.11	12.1	0.0	1.4	1	0	0	1	1	1	0	Protein	kinase	Fus3-binding
DUF2490	PF10677.4	gi|568164636|ref|YP_008948209.1|	-	0.093	11.9	0.0	0.16	11.2	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2490)
FAD_binding_5	PF00941.16	gi|568164637|ref|YP_008948210.1|	-	1.6e-50	170.9	0.0	2.3e-50	170.3	0.0	1.2	1	0	0	1	1	1	1	FAD	binding	domain	in	molybdopterin	dehydrogenase
CO_deh_flav_C	PF03450.12	gi|568164637|ref|YP_008948210.1|	-	2.1e-26	91.8	0.0	3.9e-26	90.9	0.0	1.5	1	0	0	1	1	1	1	CO	dehydrogenase	flavoprotein	C-terminal	domain
Fer2_2	PF01799.15	gi|568164638|ref|YP_008948211.1|	-	3.2e-32	110.2	0.1	3.2e-32	110.2	0.0	1.8	2	0	0	2	2	2	1	[2Fe-2S]	binding	domain
Fer2	PF00111.22	gi|568164638|ref|YP_008948211.1|	-	0.00012	21.8	0.4	0.00012	21.8	0.2	2.0	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer2_3	PF13085.1	gi|568164638|ref|YP_008948211.1|	-	0.0014	18.4	2.3	0.0014	18.4	1.6	1.5	1	1	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Ald_Xan_dh_C2	PF02738.13	gi|568164639|ref|YP_008948212.1|	-	1.8e-133	445.7	0.0	2.3e-133	445.4	0.0	1.0	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|568164639|ref|YP_008948212.1|	-	1e-25	89.9	0.0	3.2e-25	88.3	0.0	1.9	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
Rubrerythrin	PF02915.12	gi|568164640|ref|YP_008948213.1|	-	8.5e-25	87.6	3.4	1.3e-24	87.0	2.4	1.3	1	1	0	1	1	1	1	Rubrerythrin
Ferritin	PF00210.19	gi|568164640|ref|YP_008948213.1|	-	3.8e-10	39.6	2.2	0.00011	21.9	0.6	2.0	1	1	1	2	2	2	2	Ferritin-like	domain
FA_desaturase_2	PF03405.9	gi|568164640|ref|YP_008948213.1|	-	0.05	12.3	0.0	1.2	7.8	0.0	2.0	2	0	0	2	2	2	0	Fatty	acid	desaturase
PSD4	PF07631.6	gi|568164640|ref|YP_008948213.1|	-	0.058	13.7	0.2	5.6	7.3	0.0	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1592)
Peptidase_C10	PF01640.12	gi|568164640|ref|YP_008948213.1|	-	0.11	12.3	0.1	0.3	10.8	0.0	1.7	1	1	1	2	2	2	0	Peptidase	C10	family
Ferritin_2	PF13668.1	gi|568164640|ref|YP_008948213.1|	-	0.22	11.4	3.1	4.1	7.3	0.3	2.1	1	1	1	2	2	2	0	Ferritin-like	domain
CCG	PF02754.11	gi|568164641|ref|YP_008948214.1|	-	6.9e-19	67.6	2.5	1.8e-10	40.6	0.0	3.3	3	1	0	3	3	3	2	Cysteine-rich	domain
Fer4_8	PF13183.1	gi|568164641|ref|YP_008948214.1|	-	3.6e-05	23.7	6.9	9.8e-05	22.3	4.6	1.9	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|568164641|ref|YP_008948214.1|	-	9.2e-05	22.7	4.9	0.00033	20.9	3.4	2.0	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|568164641|ref|YP_008948214.1|	-	0.00017	21.2	8.4	0.013	15.4	0.5	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|568164641|ref|YP_008948214.1|	-	0.00018	21.7	7.0	0.00097	19.4	4.9	2.1	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|568164641|ref|YP_008948214.1|	-	0.00019	21.5	6.2	0.00046	20.4	4.3	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|568164641|ref|YP_008948214.1|	-	0.0056	16.9	13.6	0.012	15.8	1.1	2.5	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|568164641|ref|YP_008948214.1|	-	0.006	16.3	8.4	0.27	11.0	6.9	2.4	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|568164641|ref|YP_008948214.1|	-	0.016	14.7	13.0	0.19	11.3	1.5	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|568164641|ref|YP_008948214.1|	-	0.24	11.3	12.8	7.7	6.4	2.2	2.4	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|568164641|ref|YP_008948214.1|	-	0.46	10.9	6.2	13	6.3	1.0	2.7	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|568164641|ref|YP_008948214.1|	-	4.7	7.2	15.9	2.3	8.2	1.8	2.5	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|568164641|ref|YP_008948214.1|	-	9.2	7.0	11.5	84	4.0	2.1	2.4	1	1	2	3	3	3	0	4Fe-4S	double	cluster	binding	domain
DUF3501	PF12007.3	gi|568164642|ref|YP_008948215.1|	-	1.9e-31	109.2	0.0	2.1e-31	109.0	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3501)
AIRS_C	PF02769.17	gi|568164643|ref|YP_008948217.1|	-	2.1e-13	50.5	0.0	3.3e-13	49.9	0.0	1.4	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|568164643|ref|YP_008948217.1|	-	1.3e-08	34.9	0.0	3.1e-08	33.7	0.0	1.7	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
Pro-kuma_activ	PF09286.6	gi|568164644|ref|YP_008948218.1|	-	1.1e-23	83.8	0.9	1.9e-23	83.1	0.0	1.8	2	0	0	2	2	2	1	Pro-kumamolisin,	activation	domain
A2M_N	PF01835.14	gi|568164644|ref|YP_008948218.1|	-	1e-06	28.9	0.9	0.069	13.4	0.0	4.8	5	0	0	5	5	5	2	MG2	domain
YjcZ	PF13990.1	gi|568164644|ref|YP_008948218.1|	-	0.49	9.4	0.2	0.91	8.5	0.1	1.3	1	0	0	1	1	1	0	YjcZ-like	protein
DJ-1_PfpI	PF01965.19	gi|568164645|ref|YP_008948219.1|	-	2.1e-39	134.2	0.0	2.5e-39	134.0	0.0	1.1	1	0	0	1	1	1	1	DJ-1/PfpI	family
DUF4066	PF13278.1	gi|568164645|ref|YP_008948219.1|	-	6e-09	35.3	0.0	8.4e-09	34.9	0.0	1.1	1	0	0	1	1	1	1	Putative	amidotransferase
GATase	PF00117.23	gi|568164645|ref|YP_008948219.1|	-	0.0088	15.5	0.0	0.011	15.2	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|568164645|ref|YP_008948219.1|	-	0.036	13.4	0.0	0.047	13.1	0.0	1.3	1	0	0	1	1	1	0	Peptidase	C26
TPP_enzyme_N	PF02776.13	gi|568164648|ref|YP_008948222.1|	-	2.2e-40	137.9	0.0	3.2e-40	137.4	0.0	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|568164648|ref|YP_008948222.1|	-	1.9e-17	63.2	0.2	6e-16	58.3	0.0	2.4	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
TPP_enzyme_M	PF00205.17	gi|568164648|ref|YP_008948222.1|	-	1.1e-07	31.7	0.0	2.1e-06	27.5	0.0	2.4	1	1	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	central	domain
DXP_synthase_N	PF13292.1	gi|568164648|ref|YP_008948222.1|	-	0.14	11.1	0.0	0.51	9.2	0.0	1.9	2	0	0	2	2	2	0	1-deoxy-D-xylulose-5-phosphate	synthase
Sugar_tr	PF00083.19	gi|568164649|ref|YP_008948223.1|	-	9.3e-33	113.4	34.0	7e-25	87.4	7.6	2.0	1	1	1	2	2	2	2	Sugar	(and	other)	transporter
MFS_1	PF07690.11	gi|568164649|ref|YP_008948223.1|	-	5.8e-25	87.7	63.4	4.6e-20	71.6	20.5	2.1	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
TENA_THI-4	PF03070.11	gi|568164650|ref|YP_008948224.1|	-	1.5e-15	57.5	0.1	5.1e-15	55.8	0.1	1.8	1	1	0	1	1	1	1	TENA/THI-4/PQQC	family
Acetyltransf_1	PF00583.19	gi|568164651|ref|YP_008948225.1|	-	1.1e-11	44.5	0.0	1.8e-11	43.8	0.0	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_3	PF13302.1	gi|568164651|ref|YP_008948225.1|	-	2.9e-11	43.6	0.0	3.7e-11	43.3	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|568164651|ref|YP_008948225.1|	-	2.5e-08	34.0	0.0	3e-08	33.7	0.0	1.1	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|568164651|ref|YP_008948225.1|	-	3.7e-07	30.2	0.3	1e-06	28.7	0.2	1.7	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|568164651|ref|YP_008948225.1|	-	9e-07	28.5	0.0	1.5e-06	27.8	0.0	1.4	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_7	PF13508.1	gi|568164651|ref|YP_008948225.1|	-	1.6e-06	28.1	0.0	2.7e-06	27.4	0.0	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|568164651|ref|YP_008948225.1|	-	0.00015	21.6	0.1	0.0077	16.0	0.1	2.3	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.1	gi|568164651|ref|YP_008948225.1|	-	0.001	18.9	0.0	0.0029	17.5	0.0	1.7	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
GNAT_acetyltran	PF12746.2	gi|568164651|ref|YP_008948225.1|	-	0.0076	15.1	0.1	0.0099	14.7	0.0	1.2	1	0	0	1	1	1	1	GNAT	acetyltransferase
SinI	PF08671.5	gi|568164651|ref|YP_008948225.1|	-	0.067	12.6	0.3	0.067	12.6	0.2	1.8	2	0	0	2	2	2	0	Anti-repressor	SinI
Acetyltransf_CG	PF14542.1	gi|568164651|ref|YP_008948225.1|	-	0.07	13.0	0.0	0.19	11.6	0.0	1.7	2	0	0	2	2	2	0	GCN5-related	N-acetyl-transferase
ECH	PF00378.15	gi|568164652|ref|YP_008948226.1|	-	4.2e-47	160.3	0.0	4.7e-47	160.1	0.0	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
ECH	PF00378.15	gi|568164653|ref|YP_008948227.1|	-	8.7e-77	257.5	1.1	1e-76	257.3	0.8	1.0	1	0	0	1	1	1	1	Enoyl-CoA	hydratase/isomerase	family
Peptidase_S49	PF01343.13	gi|568164653|ref|YP_008948227.1|	-	1.7e-05	24.6	0.3	0.00025	20.8	0.0	2.5	2	0	0	2	2	2	1	Peptidase	family	S49
ECH_C	PF13766.1	gi|568164653|ref|YP_008948227.1|	-	0.053	13.6	0.0	0.13	12.4	0.0	1.6	1	0	0	1	1	1	0	2-enoyl-CoA	Hydratase	C-terminal	region
Thiolase_N	PF00108.18	gi|568164654|ref|YP_008948228.1|	-	1.2e-10	40.8	0.3	2.6e-10	39.7	0.0	1.6	2	0	0	2	2	2	1	Thiolase,	N-terminal	domain
Thiolase_C	PF02803.13	gi|568164654|ref|YP_008948228.1|	-	6.7e-10	38.4	0.2	8.5e-09	34.8	0.0	2.5	3	0	0	3	3	3	1	Thiolase,	C-terminal	domain
ketoacyl-synt	PF00109.21	gi|568164654|ref|YP_008948228.1|	-	5.7e-06	25.9	5.3	0.0016	17.9	2.3	2.4	1	1	0	2	2	2	2	Beta-ketoacyl	synthase,	N-terminal	domain
ACP_syn_III	PF08545.5	gi|568164654|ref|YP_008948228.1|	-	0.018	14.7	0.8	0.038	13.6	0.6	1.5	1	0	0	1	1	1	0	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
Ketoacyl-synt_C	PF02801.17	gi|568164654|ref|YP_008948228.1|	-	0.45	10.3	5.4	11	5.8	0.0	3.5	5	0	0	5	5	5	0	Beta-ketoacyl	synthase,	C-terminal	domain
4HBT	PF03061.17	gi|568164655|ref|YP_008948229.1|	-	7.4e-13	48.4	0.0	1.1e-12	47.8	0.0	1.3	1	0	0	1	1	1	1	Thioesterase	superfamily
DUF4442	PF14539.1	gi|568164655|ref|YP_008948229.1|	-	0.0006	19.8	0.0	0.00096	19.1	0.0	1.3	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4442)
AMP-binding_C_2	PF14535.1	gi|568164656|ref|YP_008948230.1|	-	6.5e-16	58.1	0.5	1.6e-15	56.9	0.3	1.7	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
AMP-binding	PF00501.23	gi|568164656|ref|YP_008948230.1|	-	1.1e-15	56.9	0.3	2.5e-15	55.8	0.2	1.4	1	1	0	1	1	1	1	AMP-binding	enzyme
LuxE	PF04443.7	gi|568164656|ref|YP_008948230.1|	-	1.5e-06	27.1	0.0	0.00021	20.0	0.0	2.1	2	0	0	2	2	2	2	Acyl-protein	synthetase,	LuxE
GH3	PF03321.8	gi|568164656|ref|YP_008948230.1|	-	0.00014	20.5	0.2	0.073	11.5	0.0	2.1	2	0	0	2	2	2	2	GH3	auxin-responsive	promoter
DUF35	PF01796.12	gi|568164657|ref|YP_008948231.1|	-	2.8e-13	49.8	0.2	4.5e-13	49.2	0.1	1.4	1	0	0	1	1	1	1	DUF35	OB-fold	domain
DUF35_N	PF12172.3	gi|568164657|ref|YP_008948231.1|	-	6.8e-11	41.7	0.0	1.1e-10	41.1	0.0	1.3	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
TFIIS_C	PF01096.13	gi|568164657|ref|YP_008948231.1|	-	0.0018	17.8	0.3	0.19	11.3	0.0	2.2	2	0	0	2	2	2	2	Transcription	factor	S-II	(TFIIS)
NOB1_Zn_bind	PF08772.6	gi|568164657|ref|YP_008948231.1|	-	0.019	14.7	0.1	0.029	14.2	0.0	1.3	1	0	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
DZR	PF12773.2	gi|568164657|ref|YP_008948231.1|	-	0.059	13.2	0.9	0.085	12.6	0.6	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
Rubrerythrin	PF02915.12	gi|568164658|ref|YP_008948232.1|	-	7.7e-06	26.2	0.1	2.9e-05	24.4	0.0	2.0	2	0	0	2	2	2	1	Rubrerythrin
AurF	PF11583.3	gi|568164658|ref|YP_008948232.1|	-	0.00083	18.3	0.0	0.29	10.0	0.0	2.3	2	0	0	2	2	2	2	P-aminobenzoate	N-oxygenase	AurF
FA_desaturase_2	PF03405.9	gi|568164658|ref|YP_008948232.1|	-	0.019	13.7	0.0	3.1	6.4	0.0	2.1	2	0	0	2	2	2	0	Fatty	acid	desaturase
FAA_hydrolase	PF01557.13	gi|568164659|ref|YP_008948233.1|	-	5.8e-37	127.2	0.0	7.5e-37	126.9	0.0	1.1	1	0	0	1	1	1	1	Fumarylacetoacetate	(FAA)	hydrolase	family
HpaB_N	PF11794.3	gi|568164660|ref|YP_008948234.1|	-	2.1e-77	260.1	0.0	2.8e-77	259.6	0.0	1.2	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	N	terminal
HpaB	PF03241.8	gi|568164660|ref|YP_008948234.1|	-	3.4e-53	179.5	0.0	5.1e-53	178.9	0.0	1.2	1	0	0	1	1	1	1	4-hydroxyphenylacetate	3-hydroxylase	C	terminal
Glyoxalase	PF00903.20	gi|568164661|ref|YP_008948235.1|	-	1.9e-22	79.5	0.6	6.5e-11	42.3	0.1	2.3	2	0	0	2	2	2	2	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase_2	PF12681.2	gi|568164661|ref|YP_008948235.1|	-	4e-13	49.9	0.1	1.1e-07	32.4	0.0	2.3	2	0	0	2	2	2	2	Glyoxalase-like	domain
Glyoxalase_4	PF13669.1	gi|568164661|ref|YP_008948235.1|	-	2.5e-07	30.6	0.0	0.38	10.7	0.0	3.4	2	2	0	2	2	2	2	Glyoxalase/Bleomycin	resistance	protein/Dioxygenase	superfamily
Glyoxalase_3	PF13468.1	gi|568164661|ref|YP_008948235.1|	-	0.048	13.5	0.0	2	8.3	0.0	2.9	2	1	1	3	3	3	0	Glyoxalase-like	domain
HTH_10	PF04967.7	gi|568164662|ref|YP_008948236.1|	-	3e-20	71.5	0.0	5.6e-20	70.6	0.0	1.5	1	0	0	1	1	1	1	HTH	DNA	binding	domain
DUF1492	PF07374.6	gi|568164662|ref|YP_008948236.1|	-	0.0043	17.1	0.1	1.1	9.4	0.0	2.5	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF1492)
HTH_24	PF13412.1	gi|568164662|ref|YP_008948236.1|	-	0.0047	16.2	0.4	0.73	9.2	0.0	3.1	4	0	0	4	4	4	1	Winged	helix-turn-helix	DNA-binding
Homeobox	PF00046.24	gi|568164662|ref|YP_008948236.1|	-	0.052	13.1	0.0	0.13	11.9	0.0	1.6	1	0	0	1	1	1	0	Homeobox	domain
Pirin	PF02678.11	gi|568164663|ref|YP_008948237.1|	-	6.3e-36	122.4	0.1	1.5e-35	121.2	0.0	1.7	2	0	0	2	2	2	1	Pirin
Pirin_C	PF05726.8	gi|568164663|ref|YP_008948237.1|	-	6.7e-25	87.1	0.0	1.8e-24	85.8	0.0	1.7	2	0	0	2	2	2	1	Pirin	C-terminal	cupin	domain
Phage_Mu_Gp45	PF06890.7	gi|568164663|ref|YP_008948237.1|	-	0.034	13.5	0.0	0.065	12.6	0.0	1.4	1	0	0	1	1	1	0	Bacteriophage	Mu	Gp45	protein
AMP-binding	PF00501.23	gi|568164664|ref|YP_008948238.1|	-	2.7e-69	233.6	0.0	3.3e-69	233.2	0.0	1.1	1	0	0	1	1	1	1	AMP-binding	enzyme
AMP-binding_C	PF13193.1	gi|568164664|ref|YP_008948238.1|	-	5.1e-16	59.3	0.0	9.6e-16	58.5	0.0	1.5	1	0	0	1	1	1	1	AMP-binding	enzyme	C-terminal	domain
Pterin_4a	PF01329.14	gi|568164665|ref|YP_008948239.1|	-	2.4e-30	104.1	0.0	2.6e-30	104.0	0.0	1.0	1	0	0	1	1	1	1	Pterin	4	alpha	carbinolamine	dehydratase
Oxidored_FMN	PF00724.15	gi|568164666|ref|YP_008948240.1|	-	5.5e-65	219.6	0.0	8.4e-65	219.0	0.0	1.2	1	0	0	1	1	1	1	NADH:flavin	oxidoreductase	/	NADH	oxidase	family
NAD_binding_8	PF13450.1	gi|568164666|ref|YP_008948240.1|	-	5.6e-09	35.8	0.0	1.5e-08	34.5	0.0	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox	PF00070.22	gi|568164666|ref|YP_008948240.1|	-	9.7e-09	35.5	0.8	1.8e-07	31.4	0.3	2.7	2	1	0	2	2	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|568164666|ref|YP_008948240.1|	-	1.8e-05	23.7	0.0	8.3e-05	21.6	0.0	1.9	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.9	gi|568164666|ref|YP_008948240.1|	-	0.00012	22.0	0.0	0.00027	20.8	0.0	1.6	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
3HCDH_N	PF02737.13	gi|568164666|ref|YP_008948240.1|	-	0.00081	19.0	0.0	0.0014	18.2	0.0	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
HI0933_like	PF03486.9	gi|568164666|ref|YP_008948240.1|	-	0.00082	17.9	0.2	0.02	13.3	0.1	2.1	2	0	0	2	2	2	1	HI0933-like	protein
Dus	PF01207.12	gi|568164666|ref|YP_008948240.1|	-	0.00097	18.0	0.0	0.71	8.6	0.0	2.7	3	0	0	3	3	3	2	Dihydrouridine	synthase	(Dus)
Thi4	PF01946.12	gi|568164666|ref|YP_008948240.1|	-	0.001	18.2	0.1	0.0019	17.3	0.1	1.4	1	0	0	1	1	1	1	Thi4	family
FAD_binding_3	PF01494.14	gi|568164666|ref|YP_008948240.1|	-	0.0019	17.3	0.2	0.0029	16.7	0.1	1.2	1	0	0	1	1	1	1	FAD	binding	domain
BtpA	PF03437.10	gi|568164666|ref|YP_008948240.1|	-	0.0041	16.4	0.0	0.019	14.1	0.0	2.0	2	0	0	2	2	2	1	BtpA	family
GIDA	PF01134.17	gi|568164666|ref|YP_008948240.1|	-	0.0057	15.5	0.0	0.009	14.9	0.0	1.3	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
Pyr_redox_3	PF13738.1	gi|568164666|ref|YP_008948240.1|	-	0.0072	16.4	0.1	0.18	11.8	0.0	2.2	1	1	1	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_Gly3P_dh_N	PF01210.18	gi|568164666|ref|YP_008948240.1|	-	0.021	14.5	0.0	0.077	12.7	0.0	2.0	1	0	0	1	1	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Amino_oxidase	PF01593.19	gi|568164666|ref|YP_008948240.1|	-	0.061	12.3	0.0	0.2	10.7	0.0	1.7	2	0	0	2	2	2	0	Flavin	containing	amine	oxidoreductase
UDPG_MGDP_dh_N	PF03721.9	gi|568164666|ref|YP_008948240.1|	-	0.082	12.2	0.0	0.18	11.2	0.0	1.6	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
FAD_binding_2	PF00890.19	gi|568164666|ref|YP_008948240.1|	-	0.12	11.1	0.1	0.19	10.5	0.0	1.2	1	0	0	1	1	1	0	FAD	binding	domain
Peptidase_S41	PF03572.13	gi|568164667|ref|YP_008948241.1|	-	3.2e-22	78.7	0.0	6.4e-22	77.7	0.0	1.6	1	0	0	1	1	1	1	Peptidase	family	S41
Tricorn_PDZ	PF14685.1	gi|568164667|ref|YP_008948241.1|	-	5.3e-22	77.4	0.0	1.5e-21	76.0	0.0	1.8	1	0	0	1	1	1	1	Tricorn	protease	PDZ	domain
Tricorn_C1	PF14684.1	gi|568164667|ref|YP_008948241.1|	-	4.3e-21	74.5	1.9	4.3e-21	74.5	1.3	2.1	2	0	0	2	2	2	1	Tricorn	protease	C1	domain
PD40	PF07676.7	gi|568164667|ref|YP_008948241.1|	-	6.5e-11	41.6	12.2	0.00017	21.1	0.3	5.6	6	0	0	6	6	6	3	WD40-like	Beta	Propeller	Repeat
DPPIV_N	PF00930.16	gi|568164667|ref|YP_008948241.1|	-	0.00075	18.1	1.9	0.53	8.8	0.0	4.3	4	2	0	4	4	4	2	Dipeptidyl	peptidase	IV	(DPP	IV)	N-terminal	region
PDZ_2	PF13180.1	gi|568164667|ref|YP_008948241.1|	-	0.007	16.2	0.0	0.025	14.4	0.0	2.0	1	0	0	1	1	1	1	PDZ	domain
Lactonase	PF10282.4	gi|568164667|ref|YP_008948241.1|	-	0.11	11.4	0.0	2.2	7.3	0.0	2.4	2	0	0	2	2	2	0	Lactonase,	7-bladed	beta-propeller
ABC_tran	PF00005.22	gi|568164668|ref|YP_008948242.1|	-	3.5e-24	85.6	0.1	7.6e-24	84.5	0.0	1.6	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|568164668|ref|YP_008948242.1|	-	7.2e-13	49.1	0.1	3.2e-08	33.8	0.0	2.3	1	1	0	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|568164668|ref|YP_008948242.1|	-	0.00036	19.8	0.4	0.23	10.6	0.0	2.2	1	1	1	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA	PF00004.24	gi|568164668|ref|YP_008948242.1|	-	0.0021	18.2	0.2	0.0073	16.4	0.0	2.0	3	0	0	3	3	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_29	PF13555.1	gi|568164668|ref|YP_008948242.1|	-	0.0051	16.3	0.3	0.0099	15.3	0.2	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.1	gi|568164668|ref|YP_008948242.1|	-	0.0075	15.3	0.0	0.26	10.3	0.0	2.1	1	1	1	2	2	2	1	AAA	ATPase	domain
SbcCD_C	PF13558.1	gi|568164668|ref|YP_008948242.1|	-	0.012	15.4	0.0	0.1	12.4	0.0	2.1	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
DUF258	PF03193.11	gi|568164668|ref|YP_008948242.1|	-	0.014	14.5	0.0	0.025	13.7	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
NB-ARC	PF00931.17	gi|568164668|ref|YP_008948242.1|	-	0.016	14.0	0.1	0.042	12.6	0.0	1.6	2	0	0	2	2	2	0	NB-ARC	domain
AAA_13	PF13166.1	gi|568164668|ref|YP_008948242.1|	-	0.04	12.3	0.1	0.057	11.8	0.1	1.2	1	0	0	1	1	1	0	AAA	domain
NACHT	PF05729.7	gi|568164668|ref|YP_008948242.1|	-	0.062	12.9	0.2	0.28	10.8	0.1	2.0	2	0	0	2	2	2	0	NACHT	domain
Zeta_toxin	PF06414.7	gi|568164668|ref|YP_008948242.1|	-	0.065	12.3	0.0	0.097	11.7	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
DUF87	PF01935.12	gi|568164668|ref|YP_008948242.1|	-	0.077	12.8	1.0	0.26	11.0	0.1	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF87
AAA_22	PF13401.1	gi|568164668|ref|YP_008948242.1|	-	0.089	12.9	0.1	0.26	11.4	0.0	1.9	1	1	1	2	2	2	0	AAA	domain
ABC2_membrane_3	PF12698.2	gi|568164669|ref|YP_008948243.1|	-	9.3e-05	21.6	35.0	9.3e-05	21.6	24.3	1.6	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
ABC2_membrane	PF01061.19	gi|568164669|ref|YP_008948243.1|	-	9.5e-05	21.6	28.9	9.5e-05	21.6	20.0	1.5	2	0	0	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_2	PF12679.2	gi|568164670|ref|YP_008948244.1|	-	1.4e-14	53.6	29.4	4e-14	52.1	20.4	1.6	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|568164670|ref|YP_008948244.1|	-	4.7e-14	52.1	40.3	7.3e-14	51.4	27.9	1.3	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_3	PF12698.2	gi|568164670|ref|YP_008948244.1|	-	0.0024	16.9	39.4	0.0024	16.9	27.3	1.9	1	1	1	2	2	2	1	ABC-2	family	transporter	protein
DUF4175	PF13779.1	gi|568164670|ref|YP_008948244.1|	-	0.49	8.0	2.1	0.64	7.6	1.5	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4175)
ABC_tran	PF00005.22	gi|568164671|ref|YP_008948245.1|	-	1.2e-26	93.5	0.1	5e-26	91.6	0.0	1.8	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|568164671|ref|YP_008948245.1|	-	3.3e-10	40.3	7.4	1.6e-06	28.3	0.0	2.9	1	1	2	3	3	3	2	AAA	domain
UPF0079	PF02367.12	gi|568164671|ref|YP_008948245.1|	-	0.00064	19.3	0.1	0.0013	18.3	0.1	1.5	1	0	0	1	1	1	1	Uncharacterised	P-loop	hydrolase	UPF0079
DUF4162	PF13732.1	gi|568164671|ref|YP_008948245.1|	-	0.001	19.5	1.0	0.0025	18.2	0.2	2.1	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4162)
AAA_29	PF13555.1	gi|568164671|ref|YP_008948245.1|	-	0.0023	17.4	0.1	0.0049	16.3	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_19	PF13245.1	gi|568164671|ref|YP_008948245.1|	-	0.01	15.5	0.4	0.03	14.0	0.3	1.8	1	1	0	1	1	1	0	Part	of	AAA	domain
AAA	PF00004.24	gi|568164671|ref|YP_008948245.1|	-	0.013	15.7	0.3	0.081	13.1	0.2	2.4	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_14	PF13173.1	gi|568164671|ref|YP_008948245.1|	-	0.018	14.9	1.8	2.4	8.0	0.0	3.2	1	1	1	3	3	3	0	AAA	domain
AAA_22	PF13401.1	gi|568164671|ref|YP_008948245.1|	-	0.023	14.8	0.6	0.12	12.4	0.2	2.3	1	1	1	2	2	2	0	AAA	domain
AAA_30	PF13604.1	gi|568164671|ref|YP_008948245.1|	-	0.025	14.1	0.0	0.049	13.2	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_33	PF13671.1	gi|568164671|ref|YP_008948245.1|	-	0.026	14.4	0.1	0.16	11.8	0.0	2.3	3	0	0	3	3	3	0	AAA	domain
AAA_16	PF13191.1	gi|568164671|ref|YP_008948245.1|	-	0.03	14.3	0.0	0.055	13.4	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
Mg_chelatase	PF01078.16	gi|568164671|ref|YP_008948245.1|	-	0.047	12.8	0.0	0.086	11.9	0.0	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
SRP54	PF00448.17	gi|568164671|ref|YP_008948245.1|	-	0.053	12.9	0.0	0.088	12.2	0.0	1.4	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
ArgK	PF03308.11	gi|568164671|ref|YP_008948245.1|	-	0.054	12.2	0.1	0.11	11.2	0.0	1.4	1	0	0	1	1	1	0	ArgK	protein
MutS_V	PF00488.16	gi|568164671|ref|YP_008948245.1|	-	0.059	12.7	0.1	0.17	11.2	0.0	1.7	2	0	0	2	2	2	0	MutS	domain	V
MobB	PF03205.9	gi|568164671|ref|YP_008948245.1|	-	0.067	12.8	0.8	0.33	10.6	0.0	2.4	2	1	1	3	3	3	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_5	PF07728.9	gi|568164671|ref|YP_008948245.1|	-	0.076	12.7	0.1	0.44	10.2	0.0	2.3	2	1	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
RelA_SpoT	PF04607.12	gi|568164671|ref|YP_008948245.1|	-	0.087	12.8	0.5	0.3	11.1	0.4	1.8	1	1	0	1	1	1	0	Region	found	in	RelA	/	SpoT	proteins
AAA_10	PF12846.2	gi|568164671|ref|YP_008948245.1|	-	0.11	11.9	0.1	2.3	7.5	0.0	2.1	1	1	0	2	2	2	0	AAA-like	domain
AAA_25	PF13481.1	gi|568164671|ref|YP_008948245.1|	-	0.14	11.5	0.4	0.96	8.8	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
NACHT	PF05729.7	gi|568164671|ref|YP_008948245.1|	-	0.14	11.8	0.1	0.45	10.1	0.0	1.9	2	0	0	2	2	2	0	NACHT	domain
NTPase_1	PF03266.10	gi|568164671|ref|YP_008948245.1|	-	0.44	10.2	2.5	1.3	8.7	0.1	2.5	3	0	0	3	3	3	0	NTPase
AAA_23	PF13476.1	gi|568164671|ref|YP_008948245.1|	-	1.2	9.4	10.1	10	6.4	7.0	2.1	1	1	0	1	1	1	0	AAA	domain
POR_N	PF01855.14	gi|568164672|ref|YP_008948246.1|	-	1e-58	198.5	0.0	1.9e-58	197.6	0.0	1.4	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
POR	PF01558.13	gi|568164672|ref|YP_008948246.1|	-	2.1e-32	112.4	1.1	4.5e-32	111.3	0.2	1.9	2	0	0	2	2	2	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
Transketolase_C	PF02780.15	gi|568164672|ref|YP_008948246.1|	-	7e-07	29.2	0.1	2.6e-06	27.3	0.0	1.9	2	0	0	2	2	2	1	Transketolase,	C-terminal	domain
TPP_enzyme_N	PF02776.13	gi|568164672|ref|YP_008948246.1|	-	7e-05	22.3	0.4	0.00033	20.1	0.3	2.1	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|568164673|ref|YP_008948247.1|	-	1.8e-31	108.7	0.2	2.9e-31	108.1	0.1	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
PFO_beta_C	PF12367.3	gi|568164673|ref|YP_008948247.1|	-	2e-15	56.4	1.3	2.2e-14	53.1	0.9	2.2	1	1	0	1	1	1	1	Pyruvate	ferredoxin	oxidoreductase	beta	subunit	C	terminal
TBPIP	PF07106.8	gi|568164674|ref|YP_008948248.1|	-	0.0054	16.3	2.0	0.0068	15.9	0.1	1.8	1	1	1	2	2	2	1	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
TrmB	PF01978.14	gi|568164674|ref|YP_008948248.1|	-	0.011	15.3	1.5	0.017	14.7	0.2	1.8	2	0	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
z-alpha	PF02295.12	gi|568164674|ref|YP_008948248.1|	-	0.1	12.3	0.3	0.19	11.4	0.2	1.5	1	0	0	1	1	1	0	Adenosine	deaminase	z-alpha	domain
RPA_C	PF08784.6	gi|568164674|ref|YP_008948248.1|	-	0.13	12.7	0.0	0.17	12.2	0.0	1.3	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
ATP-synt_F	PF01990.12	gi|568164674|ref|YP_008948248.1|	-	0.17	12.3	1.7	1.2	9.5	1.2	2.1	1	1	0	1	1	1	0	ATP	synthase	(F/14-kDa)	subunit
DinI	PF06183.8	gi|568164674|ref|YP_008948248.1|	-	4.3	7.4	5.7	1.9	8.5	0.7	2.4	1	1	1	2	2	2	0	DinI-like	family
RmlD_sub_bind	PF04321.12	gi|568164676|ref|YP_008948250.1|	-	2.3e-24	85.7	0.0	3e-24	85.4	0.0	1.0	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Epimerase	PF01370.16	gi|568164676|ref|YP_008948250.1|	-	1.3e-07	31.3	0.0	3.1e-07	30.0	0.0	1.5	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
NAD_binding_4	PF07993.7	gi|568164676|ref|YP_008948250.1|	-	0.082	11.8	0.0	0.1	11.5	0.0	1.2	1	0	0	1	1	1	0	Male	sterility	protein
Nol1_Nop2_Fmu	PF01189.12	gi|568164677|ref|YP_008948252.1|	-	3.6e-28	98.7	0.3	9.1e-28	97.4	0.2	1.6	1	1	0	1	1	1	1	NOL1/NOP2/sun	family
Methyltransf_31	PF13847.1	gi|568164677|ref|YP_008948252.1|	-	4.1e-06	26.4	0.1	8.9e-06	25.3	0.0	1.6	2	0	0	2	2	2	1	Methyltransferase	domain
MTS	PF05175.9	gi|568164677|ref|YP_008948252.1|	-	0.0058	16.0	0.0	0.008	15.5	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Sigma_reg_C	PF13791.1	gi|568164677|ref|YP_008948252.1|	-	0.027	14.4	1.1	0.058	13.4	0.8	1.5	1	0	0	1	1	1	0	Sigma	factor	regulator	C-terminal
Ubie_methyltran	PF01209.13	gi|568164677|ref|YP_008948252.1|	-	0.041	13.0	0.1	0.066	12.3	0.0	1.3	1	0	0	1	1	1	0	ubiE/COQ5	methyltransferase	family
HxlR	PF01638.12	gi|568164678|ref|YP_008948253.1|	-	3.9e-19	68.0	0.1	4.6e-19	67.8	0.1	1.1	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_5	PF01022.15	gi|568164678|ref|YP_008948253.1|	-	6.5e-06	25.7	0.0	8.6e-06	25.3	0.0	1.2	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_27	PF13463.1	gi|568164678|ref|YP_008948253.1|	-	9.5e-05	22.6	0.0	0.00013	22.1	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_45	PF14947.1	gi|568164678|ref|YP_008948253.1|	-	0.00013	21.6	0.2	0.00018	21.2	0.1	1.3	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_34	PF13601.1	gi|568164678|ref|YP_008948253.1|	-	0.00042	20.3	0.0	0.0005	20.0	0.0	1.1	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
RepL	PF05732.6	gi|568164678|ref|YP_008948253.1|	-	0.00071	18.8	0.2	0.0012	18.0	0.1	1.4	1	1	0	1	1	1	1	Firmicute	plasmid	replication	protein	(RepL)
PadR	PF03551.9	gi|568164678|ref|YP_008948253.1|	-	0.0014	18.3	0.1	0.0019	17.9	0.1	1.3	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_24	PF13412.1	gi|568164678|ref|YP_008948253.1|	-	0.0044	16.3	0.1	0.0065	15.8	0.1	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_20	PF12840.2	gi|568164678|ref|YP_008948253.1|	-	0.0047	16.6	0.0	0.0064	16.2	0.0	1.2	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR_2	PF12802.2	gi|568164678|ref|YP_008948253.1|	-	0.0068	16.0	0.0	0.0094	15.6	0.0	1.2	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.17	gi|568164678|ref|YP_008948253.1|	-	0.029	14.0	0.0	0.041	13.5	0.0	1.2	1	0	0	1	1	1	0	MarR	family
Sulfolobus_pRN	PF05584.6	gi|568164678|ref|YP_008948253.1|	-	0.051	13.5	0.1	0.078	12.9	0.0	1.4	1	0	0	1	1	1	0	Sulfolobus	plasmid	regulatory	protein
HTH_43	PF09904.4	gi|568164678|ref|YP_008948253.1|	-	0.075	12.8	0.0	0.093	12.5	0.0	1.1	1	0	0	1	1	1	0	Winged	helix-turn	helix
TFIIE_alpha	PF02002.12	gi|568164678|ref|YP_008948253.1|	-	0.13	11.8	0.3	0.17	11.3	0.2	1.3	1	1	0	1	1	1	0	TFIIE	alpha	subunit
DUF2250	PF10007.4	gi|568164678|ref|YP_008948253.1|	-	0.14	12.0	0.2	0.22	11.4	0.1	1.5	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Mid2	PF04478.7	gi|568165012|ref|YP_008948254.1|	-	0.35	10.2	3.0	0.53	9.6	2.1	1.3	1	0	0	1	1	1	0	Mid2	like	cell	wall	stress	sensor
DUF3040	PF11239.3	gi|568164679|ref|YP_008948257.1|	-	0.0093	15.9	1.5	0.016	15.2	1.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3040)
Lum_binding	PF00677.12	gi|568164679|ref|YP_008948257.1|	-	0.012	15.4	1.3	0.012	15.4	0.9	1.6	2	0	0	2	2	2	0	Lumazine	binding	domain
PKD	PF00801.15	gi|568164679|ref|YP_008948257.1|	-	0.077	12.7	3.1	3.4	7.4	0.3	2.3	2	0	0	2	2	2	0	PKD	domain
ATP1G1_PLM_MAT8	PF02038.11	gi|568164679|ref|YP_008948257.1|	-	0.14	11.1	5.6	0.43	9.6	0.6	2.3	1	1	1	2	2	2	0	ATP1G1/PLM/MAT8	family
IncA	PF04156.9	gi|568164679|ref|YP_008948257.1|	-	3.8	7.0	7.6	5.5	6.5	5.3	1.3	1	0	0	1	1	1	0	IncA	protein
DUF1628	PF07790.6	gi|568164679|ref|YP_008948257.1|	-	7.3	7.4	8.3	3.7	8.3	4.2	1.8	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1628)
2TM	PF13239.1	gi|568165015|ref|YP_008948258.1|	-	0.013	15.5	3.0	0.03	14.3	2.1	1.5	1	0	0	1	1	1	0	2TM	domain
tRNA-synt_1e	PF01406.14	gi|568165015|ref|YP_008948258.1|	-	0.02	13.9	0.1	0.04	13.0	0.1	1.5	1	0	0	1	1	1	0	tRNA	synthetases	class	I	(C)	catalytic	domain
SpoVIF	PF14069.1	gi|568165015|ref|YP_008948258.1|	-	0.023	14.4	0.0	0.061	13.0	0.0	1.7	1	0	0	1	1	1	0	Stage	VI	sporulation	protein	F
DUF3211	PF11485.3	gi|568165015|ref|YP_008948258.1|	-	0.075	13.0	3.5	0.092	12.7	0.2	2.7	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3211)
IncA	PF04156.9	gi|568165015|ref|YP_008948258.1|	-	7.5	6.1	9.4	3	7.3	4.8	1.6	2	0	0	2	2	2	0	IncA	protein
T2SE	PF00437.15	gi|568164680|ref|YP_008948259.1|	-	6.4e-46	156.4	0.0	1.2e-45	155.5	0.0	1.4	1	1	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_17	PF13207.1	gi|568164680|ref|YP_008948259.1|	-	0.00072	20.3	0.1	0.012	16.4	0.0	2.6	2	0	0	2	2	2	1	AAA	domain
ABC_tran	PF00005.22	gi|568164680|ref|YP_008948259.1|	-	0.00079	19.7	0.0	0.0017	18.6	0.0	1.5	1	0	0	1	1	1	1	ABC	transporter
AAA_29	PF13555.1	gi|568164680|ref|YP_008948259.1|	-	0.0029	17.0	0.3	0.0086	15.5	0.0	1.8	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
TrwB_AAD_bind	PF10412.4	gi|568164680|ref|YP_008948259.1|	-	0.0055	15.3	0.1	0.0082	14.8	0.1	1.2	1	0	0	1	1	1	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
MobB	PF03205.9	gi|568164680|ref|YP_008948259.1|	-	0.0099	15.5	0.1	0.02	14.5	0.1	1.5	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
MMR_HSR1	PF01926.18	gi|568164680|ref|YP_008948259.1|	-	0.012	15.5	0.0	0.026	14.4	0.0	1.6	1	0	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_18	PF13238.1	gi|568164680|ref|YP_008948259.1|	-	0.015	15.6	0.0	0.051	13.8	0.0	1.9	1	0	0	1	1	1	0	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|568164680|ref|YP_008948259.1|	-	0.02	14.3	0.0	0.048	13.1	0.0	1.6	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
cobW	PF02492.14	gi|568164680|ref|YP_008948259.1|	-	0.026	13.9	0.1	0.041	13.3	0.0	1.3	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
PCMT	PF01135.14	gi|568164680|ref|YP_008948259.1|	-	0.031	13.8	0.0	0.07	12.6	0.0	1.5	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
AAA_22	PF13401.1	gi|568164680|ref|YP_008948259.1|	-	0.039	14.0	0.0	0.11	12.6	0.0	1.7	2	0	0	2	2	1	0	AAA	domain
DUF87	PF01935.12	gi|568164680|ref|YP_008948259.1|	-	0.04	13.7	0.3	0.14	11.9	0.1	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF87
Septin	PF00735.13	gi|568164680|ref|YP_008948259.1|	-	0.048	12.6	0.1	0.081	11.9	0.0	1.3	1	0	0	1	1	1	0	Septin
Dynamin_N	PF00350.18	gi|568164680|ref|YP_008948259.1|	-	0.058	13.2	0.1	0.12	12.2	0.1	1.5	1	0	0	1	1	1	0	Dynamin	family
AAA_16	PF13191.1	gi|568164680|ref|YP_008948259.1|	-	0.058	13.3	0.0	0.11	12.5	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
Miro	PF08477.8	gi|568164680|ref|YP_008948259.1|	-	0.06	13.8	0.0	0.2	12.1	0.0	1.9	2	0	0	2	2	1	0	Miro-like	protein
SRP54	PF00448.17	gi|568164680|ref|YP_008948259.1|	-	0.082	12.3	0.4	0.14	11.5	0.2	1.3	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
DUF258	PF03193.11	gi|568164680|ref|YP_008948259.1|	-	0.087	12.0	0.0	0.16	11.1	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_28	PF13521.1	gi|568164680|ref|YP_008948259.1|	-	0.1	12.5	0.0	0.17	11.8	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|568164680|ref|YP_008948259.1|	-	0.15	11.5	0.1	0.25	10.7	0.0	1.4	1	0	0	1	1	1	0	AAA-like	domain
AAA_19	PF13245.1	gi|568164680|ref|YP_008948259.1|	-	0.15	11.8	0.0	0.43	10.3	0.0	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
Zeta_toxin	PF06414.7	gi|568164680|ref|YP_008948259.1|	-	0.16	11.0	0.0	0.29	10.2	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
AAA_30	PF13604.1	gi|568164680|ref|YP_008948259.1|	-	0.17	11.4	0.1	0.27	10.7	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
T2SF	PF00482.18	gi|568164681|ref|YP_008948260.1|	-	1.4e-09	37.8	4.9	6.7e-06	26.0	0.5	5.7	7	0	0	7	7	7	2	Type	II	secretion	system	(T2SS),	protein	F
Anemone_cytotox	PF06369.7	gi|568164681|ref|YP_008948260.1|	-	0.033	13.5	0.0	0.077	12.3	0.0	1.5	2	0	0	2	2	2	0	Sea	anemone	cytotoxic	protein
DUF1034	PF06280.7	gi|568164682|ref|YP_008948261.1|	-	0.00054	20.3	6.3	0.00085	19.7	4.4	1.3	1	0	0	1	1	1	1	Fn3-like	domain	(DUF1034)
CARDB	PF07705.6	gi|568164682|ref|YP_008948261.1|	-	0.036	14.0	10.3	0.092	12.8	6.3	2.1	1	1	1	2	2	2	0	CARDB
DUF3040	PF11239.3	gi|568164682|ref|YP_008948261.1|	-	0.14	12.2	1.2	0.25	11.3	0.9	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3040)
Baculo_11_kDa	PF06143.6	gi|568164682|ref|YP_008948261.1|	-	0.38	10.1	1.6	0.76	9.1	1.1	1.4	1	0	0	1	1	1	0	Baculovirus	11	kDa	family
DUF2393	PF09624.5	gi|568164682|ref|YP_008948261.1|	-	0.79	9.2	10.8	4.4	6.8	7.5	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2393)
DUF3753	PF12575.3	gi|568164682|ref|YP_008948261.1|	-	1.6	8.5	3.7	0.51	10.1	0.6	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3753)
Big_2	PF02368.13	gi|568164682|ref|YP_008948261.1|	-	8.3	6.3	20.6	0.21	11.4	1.9	2.8	2	1	1	3	3	3	0	Bacterial	Ig-like	domain	(group	2)
Glu_synthase	PF01645.12	gi|568164683|ref|YP_008948262.1|	-	1.3e-96	323.7	3.6	3.2e-93	312.5	1.0	2.1	2	0	0	2	2	2	2	Conserved	region	in	glutamate	synthase
Glu_syn_central	PF04898.9	gi|568164683|ref|YP_008948262.1|	-	5.7e-09	35.6	0.0	1.2e-05	24.7	0.0	3.3	3	0	0	3	3	3	1	Glutamate	synthase	central	domain
FMN_dh	PF01070.13	gi|568164683|ref|YP_008948262.1|	-	2e-07	30.2	11.1	6.5e-06	25.2	3.7	3.2	3	0	0	3	3	3	1	FMN-dependent	dehydrogenase
NMO	PF03060.10	gi|568164683|ref|YP_008948262.1|	-	0.021	13.9	9.6	0.077	12.1	5.8	2.0	1	1	1	2	2	2	0	Nitronate	monooxygenase
NanE	PF04131.9	gi|568164683|ref|YP_008948262.1|	-	0.033	13.1	0.3	0.072	12.0	0.2	1.5	1	0	0	1	1	1	0	Putative	N-acetylmannosamine-6-phosphate	epimerase
DHO_dh	PF01180.16	gi|568164683|ref|YP_008948262.1|	-	0.052	12.5	2.6	0.12	11.3	1.8	1.6	1	1	0	1	1	1	0	Dihydroorotate	dehydrogenase
PcrB	PF01884.12	gi|568164683|ref|YP_008948262.1|	-	0.12	11.5	3.9	0.89	8.7	0.6	2.6	2	1	1	3	3	3	0	PcrB	family
IMPDH	PF00478.20	gi|568164683|ref|YP_008948262.1|	-	0.5	9.2	9.1	0.27	10.0	4.7	1.7	2	0	0	2	2	2	0	IMP	dehydrogenase	/	GMP	reductase	domain
GXGXG	PF01493.14	gi|568164684|ref|YP_008948263.1|	-	5.8e-27	94.0	11.9	3.9e-26	91.3	8.3	2.1	1	1	0	1	1	1	1	GXGXG	motif
GATase_6	PF13522.1	gi|568164684|ref|YP_008948263.1|	-	6e-16	58.6	0.0	1.3e-15	57.5	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_2	PF00310.16	gi|568164684|ref|YP_008948263.1|	-	2.4e-14	52.8	0.0	8.5e-14	51.0	0.0	1.9	1	1	0	1	1	1	1	Glutamine	amidotransferases	class-II
GATase_7	PF13537.1	gi|568164684|ref|YP_008948263.1|	-	2.8e-07	30.3	0.0	7.4e-07	28.9	0.0	1.7	1	1	0	1	1	1	1	Glutamine	amidotransferase	domain
DUF3091	PF11291.3	gi|568164684|ref|YP_008948263.1|	-	0.092	12.7	1.5	13	5.8	0.1	2.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3091)
CbiG_N	PF11760.3	gi|568164685|ref|YP_008948264.1|	-	4.2e-06	26.3	0.0	7.8e-06	25.5	0.0	1.4	1	0	0	1	1	1	1	Cobalamin	synthesis	G	N-terminal
CbiG_mid	PF11761.3	gi|568164685|ref|YP_008948264.1|	-	0.0087	16.2	0.0	0.019	15.1	0.0	1.6	2	0	0	2	2	2	1	Cobalamin	biosynthesis	central	region
Peripla_BP_2	PF01497.13	gi|568164686|ref|YP_008948265.1|	-	1.6e-14	53.6	0.0	2e-14	53.3	0.0	1.1	1	0	0	1	1	1	1	Periplasmic	binding	protein
NIR_SIR	PF01077.17	gi|568164686|ref|YP_008948265.1|	-	0.14	11.5	0.1	0.27	10.5	0.0	1.4	1	0	0	1	1	1	0	Nitrite	and	sulphite	reductase	4Fe-4S	domain
Haemagg_act	PF05860.8	gi|568165016|ref|YP_008948266.1|	-	0.015	15.0	3.5	0.027	14.2	2.5	1.4	1	0	0	1	1	1	0	haemagglutination	activity	domain
HMGL-like	PF00682.14	gi|568164687|ref|YP_008948267.1|	-	9.7e-44	149.7	0.0	1.5e-43	149.1	0.0	1.3	1	0	0	1	1	1	1	HMGL-like
LeuA_dimer	PF08502.5	gi|568164687|ref|YP_008948267.1|	-	1.9e-22	79.4	0.9	3.4e-21	75.4	0.1	2.5	2	0	0	2	2	2	1	LeuA	allosteric	(dimerisation)	domain
PEP_mutase	PF13714.1	gi|568164687|ref|YP_008948267.1|	-	0.05	12.8	0.0	0.09	11.9	0.0	1.3	1	0	0	1	1	1	0	Phosphoenolpyruvate	phosphomutase
UbiA	PF01040.13	gi|568164688|ref|YP_008948268.1|	-	4.6e-31	107.9	25.3	6e-31	107.5	17.6	1.2	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
DUF2752	PF10825.3	gi|568164688|ref|YP_008948268.1|	-	0.18	11.8	2.7	2.4	8.2	0.0	3.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2752)
DUF1129	PF06570.6	gi|568164688|ref|YP_008948268.1|	-	2.9	7.1	13.5	0.26	10.5	2.4	2.4	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1129)
AIG2	PF06094.7	gi|568164689|ref|YP_008948269.1|	-	8.3e-24	84.0	5.1	1.2e-17	64.2	0.8	2.1	2	0	0	2	2	2	2	AIG2-like	family
AIG2_2	PF13772.1	gi|568164689|ref|YP_008948269.1|	-	1.8e-10	40.7	2.5	1e-05	25.5	0.0	2.4	2	0	0	2	2	2	2	AIG2-like	family
SF3b10	PF07189.6	gi|568164689|ref|YP_008948269.1|	-	0.1	12.4	0.0	0.39	10.5	0.0	1.8	2	0	0	2	2	2	0	Splicing	factor	3B	subunit	10	(SF3b10)
NfeD	PF01957.13	gi|568164690|ref|YP_008948271.1|	-	1.8e-18	67.0	0.4	2.7e-18	66.5	0.2	1.2	1	0	0	1	1	1	1	NfeD-like	C-terminal,	partner-binding
FUSC-like	PF12805.2	gi|568164690|ref|YP_008948271.1|	-	0.024	13.5	0.4	0.03	13.2	0.3	1.1	1	0	0	1	1	1	0	FUSC-like	inner	membrane	protein	yccS
Chordopox_A13L	PF05961.6	gi|568164690|ref|YP_008948271.1|	-	4.2	7.3	7.5	26	4.8	0.1	2.3	1	1	1	2	2	2	0	Chordopoxvirus	A13L	protein
Thermopsin	PF05317.6	gi|568164691|ref|YP_008948272.1|	-	9.6e-49	165.6	13.0	9.6e-49	165.6	9.0	2.1	2	0	0	2	2	2	1	Thermopsin
Band_7	PF01145.20	gi|568164692|ref|YP_008948273.1|	-	4.6e-35	121.1	4.7	6e-35	120.7	3.2	1.1	1	0	0	1	1	1	1	SPFH	domain	/	Band	7	family
Band_7_1	PF13421.1	gi|568164692|ref|YP_008948273.1|	-	0.007	15.9	0.5	0.058	12.9	0.3	2.1	1	1	0	2	2	2	1	SPFH	domain-Band	7	family
DUF1297	PF06973.7	gi|568165018|ref|YP_008948274.1|	-	0.079	12.2	0.1	0.079	12.2	0.1	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1297)
ThiI	PF02568.9	gi|568164693|ref|YP_008948276.1|	-	1.4e-45	155.1	0.0	2.3e-45	154.4	0.0	1.3	1	0	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
THUMP	PF02926.12	gi|568164693|ref|YP_008948276.1|	-	2.2e-15	56.7	0.8	4.3e-15	55.8	0.6	1.6	1	0	0	1	1	1	1	THUMP	domain
QueC	PF06508.8	gi|568164693|ref|YP_008948276.1|	-	3.6e-06	26.4	0.0	0.00091	18.5	0.0	2.5	1	1	0	2	2	2	2	Queuosine	biosynthesis	protein	QueC
NAD_binding_5	PF07994.7	gi|568164694|ref|YP_008948277.1|	-	4.8e-42	144.4	0.0	1.9e-41	142.4	0.0	1.8	1	1	0	1	1	1	1	Myo-inositol-1-phosphate	synthase
Inos-1-P_synth	PF01658.12	gi|568164694|ref|YP_008948277.1|	-	2e-21	75.9	0.0	4.7e-21	74.7	0.0	1.7	1	0	0	1	1	1	1	Myo-inositol-1-phosphate	synthase
GFO_IDH_MocA	PF01408.17	gi|568164694|ref|YP_008948277.1|	-	0.0089	16.5	0.1	0.11	13.0	0.1	2.3	1	1	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
Oxidored_q1	PF00361.15	gi|568164695|ref|YP_008948278.1|	-	2.8e-40	138.3	34.9	2.8e-40	138.3	24.2	2.2	2	0	0	2	2	2	1	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
Oxidored_q1	PF00361.15	gi|568164696|ref|YP_008948279.1|	-	2.5e-80	269.6	69.5	2.8e-46	157.9	22.4	6.5	6	1	0	6	6	6	3	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
Oxidored_q1_N	PF00662.15	gi|568164696|ref|YP_008948279.1|	-	3e-07	29.9	11.1	0.002	17.6	1.7	4.4	3	0	0	3	3	3	2	NADH-Ubiquinone	oxidoreductase	(complex	I),	chain	5	N-terminus
Oxidored_q2	PF00420.19	gi|568164697|ref|YP_008948280.1|	-	4.6e-11	42.1	9.1	5.1e-11	42.0	6.3	1.0	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
TspO_MBR	PF03073.10	gi|568164697|ref|YP_008948280.1|	-	0.0035	16.8	5.0	0.0051	16.3	3.5	1.3	1	1	0	1	1	1	1	TspO/MBR	family
BaxI_1	PF12811.2	gi|568164697|ref|YP_008948280.1|	-	0.11	11.6	7.2	0.24	10.5	5.0	1.5	1	1	0	1	1	1	0	Bax	inhibitor	1	like
CoA_binding_3	PF13727.1	gi|568164697|ref|YP_008948280.1|	-	1.5	8.6	5.1	0.91	9.3	2.4	1.4	1	1	1	2	2	2	0	CoA-binding	domain
Oxidored_q3	PF00499.15	gi|568164698|ref|YP_008948281.1|	-	3.9e-11	42.9	19.9	5.7e-11	42.3	13.8	1.2	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	6
DUF4040	PF13244.1	gi|568164698|ref|YP_008948281.1|	-	0.026	14.4	2.4	0.026	14.4	1.7	3.3	3	1	0	3	3	3	0	Domain	of	unknown	function	(DUF4040)
Fer4	PF00037.22	gi|568164699|ref|YP_008948282.1|	-	6.8e-15	53.9	13.5	3.1e-09	36.0	2.6	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|568164699|ref|YP_008948282.1|	-	2.3e-12	46.5	19.3	7.9e-09	35.2	6.9	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|568164699|ref|YP_008948282.1|	-	8.1e-11	41.3	12.6	1.4e-05	24.7	2.0	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|568164699|ref|YP_008948282.1|	-	1.2e-10	41.6	9.6	2.1e-10	40.8	6.6	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|568164699|ref|YP_008948282.1|	-	3.3e-09	36.4	8.0	8.8e-09	35.0	5.7	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|568164699|ref|YP_008948282.1|	-	7.8e-09	36.1	2.9	0.0017	19.0	0.0	2.5	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_9	PF13187.1	gi|568164699|ref|YP_008948282.1|	-	1.5e-08	34.7	8.4	2.9e-08	33.8	5.8	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|568164699|ref|YP_008948282.1|	-	2e-07	30.5	13.5	0.00029	20.5	1.8	2.7	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|568164699|ref|YP_008948282.1|	-	3.5e-07	30.4	0.3	0.018	15.3	0.0	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|568164699|ref|YP_008948282.1|	-	3.5e-06	26.9	16.3	0.00013	21.9	6.0	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|568164699|ref|YP_008948282.1|	-	1.1e-05	25.3	10.5	0.0086	16.3	1.4	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|568164699|ref|YP_008948282.1|	-	6.1e-05	23.2	18.3	0.0065	16.9	3.6	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|568164699|ref|YP_008948282.1|	-	0.0021	18.4	13.6	0.15	12.5	2.7	2.5	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|568164699|ref|YP_008948282.1|	-	0.0029	18.1	11.3	0.03	14.8	1.0	2.4	1	1	1	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.1	gi|568164699|ref|YP_008948282.1|	-	0.071	13.5	10.0	0.45	10.9	1.7	2.6	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_11	PF13247.1	gi|568164699|ref|YP_008948282.1|	-	0.12	12.2	2.6	0.76	9.6	2.0	1.8	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
NADHdh	PF00146.16	gi|568164700|ref|YP_008948283.1|	-	1.1e-51	175.7	27.3	1.3e-36	126.3	10.3	2.0	1	1	1	2	2	2	2	NADH	dehydrogenase
Complex1_49kDa	PF00346.14	gi|568164701|ref|YP_008948284.1|	-	3.6e-64	216.3	0.0	4.5e-64	216.0	0.0	1.1	1	0	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase,	49	Kd	subunit
NiFeSe_Hases	PF00374.14	gi|568164701|ref|YP_008948284.1|	-	0.026	13.3	0.0	0.048	12.4	0.0	1.3	1	0	0	1	1	1	0	Nickel-dependent	hydrogenase
Complex1_30kDa	PF00329.14	gi|568164702|ref|YP_008948285.1|	-	3.9e-31	107.3	0.1	4.9e-31	107.0	0.1	1.1	1	0	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase,	30	Kd	subunit
Oxidored_q4	PF00507.14	gi|568164703|ref|YP_008948286.1|	-	1.1e-05	25.1	4.1	1.5e-05	24.7	2.8	1.3	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase,	chain	3
YqhR	PF11085.3	gi|568164703|ref|YP_008948286.1|	-	0.019	14.5	3.0	0.025	14.1	2.1	1.2	1	0	0	1	1	1	0	Conserved	membrane	protein	YqhR
Thy1	PF02511.10	gi|568164704|ref|YP_008948287.1|	-	6.5e-62	208.2	1.1	8.1e-62	207.9	0.8	1.1	1	0	0	1	1	1	1	Thymidylate	synthase	complementing	protein
DUF2175	PF09943.4	gi|568164705|ref|YP_008948288.1|	-	8.6e-38	128.4	2.7	9.6e-38	128.3	1.8	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2175)
Vps39_2	PF10367.4	gi|568164705|ref|YP_008948288.1|	-	0.00094	19.3	1.0	0.0057	16.8	0.0	2.0	2	0	0	2	2	2	1	Vacuolar	sorting	protein	39	domain	2
DUF2410	PF10307.4	gi|568164705|ref|YP_008948288.1|	-	0.0035	16.7	0.3	0.0038	16.6	0.2	1.1	1	0	0	1	1	1	1	Hypothetical	protein	(DUF2410)
SRPRB	PF09439.5	gi|568164705|ref|YP_008948288.1|	-	0.019	14.1	0.7	0.023	13.9	0.5	1.3	1	0	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
FliG_N	PF14842.1	gi|568164705|ref|YP_008948288.1|	-	0.019	15.0	1.1	0.031	14.3	0.7	1.4	1	1	0	1	1	1	0	FliG	N-terminal	domain
GFA	PF04828.9	gi|568164705|ref|YP_008948288.1|	-	0.02	14.8	0.2	0.035	14.0	0.1	1.5	1	1	0	1	1	1	0	Glutathione-dependent	formaldehyde-activating	enzyme
DUF1825	PF08855.5	gi|568164705|ref|YP_008948288.1|	-	0.024	14.6	1.1	0.029	14.3	0.7	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1825)
DUF3231	PF11553.3	gi|568164705|ref|YP_008948288.1|	-	0.054	13.0	0.4	0.088	12.3	0.2	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3231)
Reticulon	PF02453.12	gi|568164705|ref|YP_008948288.1|	-	0.14	11.7	0.2	0.2	11.2	0.1	1.3	1	1	0	1	1	1	0	Reticulon
C5-epim_C	PF06662.8	gi|568164706|ref|YP_008948289.1|	-	0.00012	21.4	1.0	0.031	13.5	0.1	2.7	1	1	1	2	2	2	2	D-glucuronyl	C5-epimerase	C-terminus
Glyco_hydro_76	PF03663.9	gi|568164706|ref|YP_008948289.1|	-	0.034	13.5	0.6	0.24	10.7	0.4	2.0	1	1	0	1	1	1	0	Glycosyl	hydrolase	family	76
DUF364	PF04016.7	gi|568164707|ref|YP_008948290.1|	-	2.4e-28	98.2	0.0	3.5e-28	97.7	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF364)
DUF4213	PF13938.1	gi|568164707|ref|YP_008948290.1|	-	2.9e-18	65.8	0.0	4.5e-18	65.1	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4213)
PadR	PF03551.9	gi|568164708|ref|YP_008948291.1|	-	4.4e-17	61.6	0.1	7.5e-17	60.8	0.1	1.4	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
HTH_27	PF13463.1	gi|568164708|ref|YP_008948291.1|	-	0.0034	17.6	0.0	0.012	15.8	0.0	1.9	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
Taeniidae_ag	PF05596.6	gi|568164708|ref|YP_008948291.1|	-	0.0041	16.9	0.5	0.0091	15.7	0.3	1.7	1	1	0	1	1	1	1	Taeniidae	antigen
TrmB	PF01978.14	gi|568164708|ref|YP_008948291.1|	-	0.0053	16.4	0.1	0.019	14.6	0.0	2.1	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
DUF1495	PF07381.6	gi|568164708|ref|YP_008948291.1|	-	0.0069	16.0	0.7	0.023	14.3	0.2	2.1	2	1	0	2	2	2	1	Winged	helix	DNA-binding	domain	(DUF1495)
DUF3116	PF11313.3	gi|568164708|ref|YP_008948291.1|	-	0.021	14.4	0.1	0.052	13.1	0.0	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3116)
HTH_45	PF14947.1	gi|568164708|ref|YP_008948291.1|	-	0.027	14.2	0.3	0.082	12.7	0.0	1.9	2	0	0	2	2	2	0	Winged	helix-turn-helix
HTH_34	PF13601.1	gi|568164708|ref|YP_008948291.1|	-	0.027	14.4	0.1	0.082	12.9	0.1	1.9	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
DUF4364	PF14277.1	gi|568164708|ref|YP_008948291.1|	-	0.03	13.9	0.2	0.076	12.6	0.0	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4364)
ALS2CR8	PF15299.1	gi|568164708|ref|YP_008948291.1|	-	0.062	12.8	0.6	0.086	12.4	0.0	1.5	2	0	0	2	2	2	0	Amyotrophic	lateral	sclerosis	2	chromosomal	region	candidate	gene	8
HTH_5	PF01022.15	gi|568164708|ref|YP_008948291.1|	-	0.12	12.0	0.7	0.63	9.7	0.1	2.5	3	0	0	3	3	3	0	Bacterial	regulatory	protein,	arsR	family
DUF2862	PF11061.3	gi|568164708|ref|YP_008948291.1|	-	0.14	11.8	1.8	0.35	10.5	0.2	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2862)
Aldolase_2	PF10120.4	gi|568164709|ref|YP_008948292.1|	-	8.6e-59	197.7	0.1	9.8e-59	197.5	0.0	1.0	1	0	0	1	1	1	1	Putative	aldolase
Transposase_22	PF02994.9	gi|568164709|ref|YP_008948292.1|	-	0.008	14.7	0.2	0.0088	14.5	0.1	1.1	1	0	0	1	1	1	1	L1	transposable	element
CarboxypepD_reg	PF13620.1	gi|568165020|ref|YP_008948293.1|	-	4.9e-09	36.1	9.3	4.9e-09	36.1	6.4	3.6	3	1	0	3	3	2	1	Carboxypeptidase	regulatory-like	domain
Baculo_PEP_C	PF04513.7	gi|568165020|ref|YP_008948293.1|	-	1.4e-08	34.6	21.1	1.4e-08	34.6	14.6	2.1	2	0	0	2	2	1	1	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Big_1	PF02369.11	gi|568165020|ref|YP_008948293.1|	-	1.6e-07	31.1	30.4	9.2e-06	25.5	9.3	4.4	3	1	0	3	3	3	2	Bacterial	Ig-like	domain	(group	1)
ATG16	PF08614.6	gi|568165020|ref|YP_008948293.1|	-	2.8e-07	30.5	7.0	4.2e-07	29.9	4.8	1.2	1	0	0	1	1	1	1	Autophagy	protein	16	(ATG16)
Reo_sigmaC	PF04582.7	gi|568165020|ref|YP_008948293.1|	-	3.7e-07	29.6	18.7	9.7e-07	28.2	13.0	1.6	1	0	0	1	1	1	1	Reovirus	sigma	C	capsid	protein
TMF_DNA_bd	PF12329.3	gi|568165020|ref|YP_008948293.1|	-	1.3e-06	28.0	8.8	0.0029	17.3	0.8	2.3	1	1	1	2	2	2	2	TATA	element	modulatory	factor	1	DNA	binding
DUF4480	PF13715.1	gi|568165020|ref|YP_008948293.1|	-	1.7e-06	27.9	1.3	1.7e-06	27.9	0.9	3.1	3	0	0	3	3	2	1	Domain	of	unknown	function	(DUF4480)
TBPIP	PF07106.8	gi|568165020|ref|YP_008948293.1|	-	2.6e-06	27.0	6.4	0.00017	21.2	0.3	2.2	1	1	1	2	2	2	2	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
FlaC_arch	PF05377.6	gi|568165020|ref|YP_008948293.1|	-	3.3e-06	26.8	6.4	0.00067	19.5	1.2	2.9	1	1	2	3	3	3	1	Flagella	accessory	protein	C	(FlaC)
Spc7	PF08317.6	gi|568165020|ref|YP_008948293.1|	-	5e-06	25.4	4.6	7.7e-06	24.7	3.2	1.2	1	0	0	1	1	1	1	Spc7	kinetochore	protein
Lzipper-MIP1	PF14389.1	gi|568165020|ref|YP_008948293.1|	-	9.1e-06	25.6	2.5	0.015	15.4	0.2	2.5	1	1	1	2	2	2	2	Leucine-zipper	of	ternary	complex	factor	MIP1
CENP-F_leu_zip	PF10473.4	gi|568165020|ref|YP_008948293.1|	-	1.2e-05	25.2	1.6	2.1e-05	24.3	1.1	1.4	1	0	0	1	1	1	1	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
XhlA	PF10779.4	gi|568165020|ref|YP_008948293.1|	-	1.2e-05	25.0	0.9	0.074	12.9	0.0	2.4	1	1	1	2	2	2	2	Haemolysin	XhlA
DUF1664	PF07889.7	gi|568165020|ref|YP_008948293.1|	-	1.7e-05	24.5	3.0	0.00019	21.1	0.3	2.4	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF1664)
AAA_13	PF13166.1	gi|568165020|ref|YP_008948293.1|	-	2.3e-05	23.0	3.4	3.7e-05	22.4	2.4	1.2	1	0	0	1	1	1	1	AAA	domain
ADIP	PF11559.3	gi|568165020|ref|YP_008948293.1|	-	3e-05	23.9	9.9	0.0011	18.9	1.2	2.2	1	1	1	2	2	2	2	Afadin-	and	alpha	-actinin-Binding
IncA	PF04156.9	gi|568165020|ref|YP_008948293.1|	-	3.1e-05	23.6	7.1	3.1e-05	23.6	4.9	2.8	2	1	1	3	3	1	1	IncA	protein
Myosin_tail_1	PF01576.14	gi|568165020|ref|YP_008948293.1|	-	4.1e-05	21.5	1.7	5.4e-05	21.1	1.2	1.0	1	0	0	1	1	1	1	Myosin	tail
DUF869	PF05911.6	gi|568165020|ref|YP_008948293.1|	-	4.6e-05	21.8	2.3	6.1e-05	21.4	1.6	1.0	1	0	0	1	1	1	1	Plant	protein	of	unknown	function	(DUF869)
Prefoldin_2	PF01920.15	gi|568165020|ref|YP_008948293.1|	-	6.6e-05	22.6	0.3	0.085	12.6	0.1	2.4	1	1	1	2	2	2	1	Prefoldin	subunit
NPV_P10	PF05531.7	gi|568165020|ref|YP_008948293.1|	-	7.6e-05	22.8	13.5	0.0085	16.3	0.7	2.4	1	1	1	2	2	2	2	Nucleopolyhedrovirus	P10	protein
MG1	PF11974.3	gi|568165020|ref|YP_008948293.1|	-	8.2e-05	23.0	1.9	8.2e-05	23.0	1.3	3.3	2	1	1	3	3	3	1	Alpha-2-macroglobulin	MG1	domain
CALCOCO1	PF07888.6	gi|568165020|ref|YP_008948293.1|	-	9.3e-05	20.9	2.5	0.00014	20.3	1.7	1.1	1	0	0	1	1	1	1	Calcium	binding	and	coiled-coil	domain	(CALCOCO1)	like
SlyX	PF04102.7	gi|568165020|ref|YP_008948293.1|	-	0.0001	22.5	3.1	0.0098	16.2	0.2	2.4	1	1	1	2	2	2	2	SlyX
Atg14	PF10186.4	gi|568165020|ref|YP_008948293.1|	-	0.00011	21.3	1.6	0.00016	20.7	1.1	1.2	1	0	0	1	1	1	1	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
BLOC1_2	PF10046.4	gi|568165020|ref|YP_008948293.1|	-	0.00012	22.2	7.4	0.021	14.9	0.1	2.4	1	1	1	2	2	2	2	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Filament	PF00038.16	gi|568165020|ref|YP_008948293.1|	-	0.00016	21.2	0.8	0.00024	20.6	0.6	1.1	1	0	0	1	1	1	1	Intermediate	filament	protein
DUF3450	PF11932.3	gi|568165020|ref|YP_008948293.1|	-	0.00024	20.4	5.4	0.0016	17.7	0.4	2.2	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF3450)
TPR_MLP1_2	PF07926.7	gi|568165020|ref|YP_008948293.1|	-	0.0003	20.5	4.6	0.0013	18.4	3.2	1.9	1	1	0	1	1	1	1	TPR/MLP1/MLP2-like	protein
A2M_N	PF01835.14	gi|568165020|ref|YP_008948293.1|	-	0.00031	20.9	3.4	0.0015	18.7	0.3	3.1	3	0	0	3	3	2	1	MG2	domain
Prefoldin	PF02996.12	gi|568165020|ref|YP_008948293.1|	-	0.00031	20.3	4.2	0.14	11.8	0.3	3.1	1	1	2	3	3	3	2	Prefoldin	subunit
DUF342	PF03961.8	gi|568165020|ref|YP_008948293.1|	-	0.00043	18.8	0.8	0.00068	18.1	0.5	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF342)
DUF2730	PF10805.3	gi|568165020|ref|YP_008948293.1|	-	0.0005	19.7	1.6	0.037	13.7	0.4	2.5	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF2730)
APG6	PF04111.7	gi|568165020|ref|YP_008948293.1|	-	0.00061	18.9	1.3	0.00088	18.4	0.9	1.1	1	0	0	1	1	1	1	Autophagy	protein	Apg6
GAS	PF13851.1	gi|568165020|ref|YP_008948293.1|	-	0.00084	18.5	0.8	0.0014	17.8	0.6	1.2	1	0	0	1	1	1	1	Growth-arrest	specific	micro-tubule	binding
HOOK	PF05622.7	gi|568165020|ref|YP_008948293.1|	-	0.00089	17.1	1.3	0.0012	16.7	0.9	1.1	1	0	0	1	1	1	1	HOOK	protein
CENP-Q	PF13094.1	gi|568165020|ref|YP_008948293.1|	-	0.00096	19.2	2.5	0.0027	17.7	1.7	1.7	1	1	0	1	1	1	1	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
MscS_porin	PF12795.2	gi|568165020|ref|YP_008948293.1|	-	0.0011	18.3	23.2	0.0085	15.4	7.4	2.2	1	1	1	2	2	2	2	Mechanosensitive	ion	channel	porin	domain
Nup54	PF13874.1	gi|568165020|ref|YP_008948293.1|	-	0.0012	18.5	5.6	0.002	17.8	3.8	1.3	1	0	0	1	1	1	1	Nucleoporin	complex	subunit	54
Fib_alpha	PF08702.5	gi|568165020|ref|YP_008948293.1|	-	0.0015	18.7	11.3	0.035	14.2	4.8	2.2	1	1	1	2	2	2	1	Fibrinogen	alpha/beta	chain	family
EMP24_GP25L	PF01105.19	gi|568165020|ref|YP_008948293.1|	-	0.0015	18.2	10.0	0.3	10.8	2.5	3.9	1	1	2	3	3	3	1	emp24/gp25L/p24	family/GOLD
IFT57	PF10498.4	gi|568165020|ref|YP_008948293.1|	-	0.0016	17.2	4.5	0.0025	16.6	3.1	1.2	1	0	0	1	1	1	1	Intra-flagellar	transport	protein	57
WEMBL	PF05701.6	gi|568165020|ref|YP_008948293.1|	-	0.0017	16.8	2.0	0.0023	16.4	1.4	1.0	1	0	0	1	1	1	1	Weak	chloroplast	movement	under	blue	light
DUF904	PF06005.7	gi|568165020|ref|YP_008948293.1|	-	0.0018	18.5	6.5	0.091	13.0	4.5	2.3	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF904)
Tropomyosin_1	PF12718.2	gi|568165020|ref|YP_008948293.1|	-	0.0019	18.0	0.9	0.25	11.1	0.3	2.0	1	1	1	2	2	2	1	Tropomyosin	like
HAUS-augmin3	PF14932.1	gi|568165020|ref|YP_008948293.1|	-	0.0019	17.4	7.3	0.0028	16.8	5.1	1.2	1	0	0	1	1	1	1	HAUS	augmin-like	complex	subunit	3
Cna_B	PF05738.8	gi|568165020|ref|YP_008948293.1|	-	0.0026	17.4	2.3	0.0026	17.4	1.6	2.7	2	0	0	2	2	2	1	Cna	protein	B-type	domain
AAA_27	PF13514.1	gi|568165020|ref|YP_008948293.1|	-	0.003	15.3	0.6	0.0041	14.8	0.4	1.1	1	0	0	1	1	1	1	AAA	domain
V_ATPase_I	PF01496.14	gi|568165020|ref|YP_008948293.1|	-	0.003	15.4	0.0	0.0049	14.8	0.0	1.4	1	0	0	1	1	1	1	V-type	ATPase	116kDa	subunit	family
TMF_TATA_bd	PF12325.3	gi|568165020|ref|YP_008948293.1|	-	0.0033	17.1	3.9	0.12	12.1	2.8	2.3	1	1	0	1	1	1	1	TATA	element	modulatory	factor	1	TATA	binding
DivIC	PF04977.10	gi|568165020|ref|YP_008948293.1|	-	0.0034	16.8	5.2	0.38	10.2	0.2	3.3	1	1	2	3	3	3	1	Septum	formation	initiator
Med9	PF07544.8	gi|568165020|ref|YP_008948293.1|	-	0.0034	17.0	0.5	0.013	15.2	0.2	1.9	1	1	0	1	1	1	1	RNA	polymerase	II	transcription	mediator	complex	subunit	9
FliJ	PF02050.11	gi|568165020|ref|YP_008948293.1|	-	0.0039	17.2	4.1	0.027	14.4	0.1	2.2	1	1	1	2	2	2	1	Flagellar	FliJ	protein
DUF812	PF05667.6	gi|568165020|ref|YP_008948293.1|	-	0.004	15.7	4.0	0.012	14.1	2.9	1.6	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF812)
Laminin_I	PF06008.9	gi|568165020|ref|YP_008948293.1|	-	0.0042	16.4	8.2	0.12	11.7	2.0	2.0	1	1	1	2	2	2	1	Laminin	Domain	I
Cast	PF10174.4	gi|568165020|ref|YP_008948293.1|	-	0.0047	15.0	0.1	0.007	14.4	0.0	1.2	1	0	0	1	1	1	1	RIM-binding	protein	of	the	cytomatrix	active	zone
DivIVA	PF05103.8	gi|568165020|ref|YP_008948293.1|	-	0.0048	16.9	1.4	0.057	13.4	0.2	2.1	1	1	1	2	2	2	1	DivIVA	protein
DUF4164	PF13747.1	gi|568165020|ref|YP_008948293.1|	-	0.0052	16.8	0.1	0.0088	16.1	0.1	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4164)
Seryl_tRNA_N	PF02403.17	gi|568165020|ref|YP_008948293.1|	-	0.0053	16.7	3.1	0.0096	15.9	2.2	1.4	1	0	0	1	1	1	1	Seryl-tRNA	synthetase	N-terminal	domain
CCDC155	PF14662.1	gi|568165020|ref|YP_008948293.1|	-	0.006	16.2	1.7	0.0092	15.5	1.2	1.2	1	0	0	1	1	1	1	Coiled-coil	region	of	CCDC155
Snapin_Pallidin	PF14712.1	gi|568165020|ref|YP_008948293.1|	-	0.0061	16.8	8.9	0.022	15.0	3.5	2.4	1	1	1	2	2	2	1	Snapin/Pallidin
PspA_IM30	PF04012.7	gi|568165020|ref|YP_008948293.1|	-	0.0062	15.9	1.0	0.11	11.8	0.7	2.0	1	1	0	1	1	1	1	PspA/IM30	family
Laminin_II	PF06009.7	gi|568165020|ref|YP_008948293.1|	-	0.0065	16.2	9.4	0.015	15.0	6.5	1.6	1	1	0	1	1	1	1	Laminin	Domain	II
V-SNARE	PF05008.10	gi|568165020|ref|YP_008948293.1|	-	0.007	16.5	1.4	0.013	15.6	1.0	1.5	1	0	0	1	1	1	1	Vesicle	transport	v-SNARE	protein	N-terminus
DUF3584	PF12128.3	gi|568165020|ref|YP_008948293.1|	-	0.0081	13.5	1.8	0.01	13.2	1.3	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3584)
DUF972	PF06156.8	gi|568165020|ref|YP_008948293.1|	-	0.0086	16.4	2.6	0.17	12.2	0.4	2.3	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF972)
FliD_C	PF07195.7	gi|568165020|ref|YP_008948293.1|	-	0.0093	15.2	14.1	0.04	13.2	4.5	2.6	1	1	1	2	2	2	1	Flagellar	hook-associated	protein	2	C-terminus
DUF2968	PF11180.3	gi|568165020|ref|YP_008948293.1|	-	0.011	15.1	1.0	0.039	13.3	0.6	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2968)
Bacillus_HBL	PF05791.6	gi|568165020|ref|YP_008948293.1|	-	0.013	14.9	11.0	0.2	11.0	7.6	2.2	1	1	0	1	1	1	0	Bacillus	haemolytic	enterotoxin	(HBL)
BicD	PF09730.4	gi|568165020|ref|YP_008948293.1|	-	0.013	13.8	3.7	0.018	13.4	2.6	1.1	1	0	0	1	1	1	0	Microtubule-associated	protein	Bicaudal-D
DUF4140	PF13600.1	gi|568165020|ref|YP_008948293.1|	-	0.014	15.8	3.3	0.94	9.9	0.2	3.4	2	1	1	3	3	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
Vps51	PF08700.6	gi|568165020|ref|YP_008948293.1|	-	0.017	14.9	8.2	1.3	8.8	0.4	3.5	1	1	3	4	4	4	0	Vps51/Vps67
Spc24	PF08286.6	gi|568165020|ref|YP_008948293.1|	-	0.018	14.7	8.0	32	4.2	5.5	2.9	1	1	0	1	1	1	0	Spc24	subunit	of	Ndc80
Fmp27_WPPW	PF10359.4	gi|568165020|ref|YP_008948293.1|	-	0.023	13.1	2.7	0.059	11.7	0.4	1.9	1	1	1	2	2	2	0	RNA	pol	II	promoter	Fmp27	protein	domain
COG5	PF10392.4	gi|568165020|ref|YP_008948293.1|	-	0.023	14.6	12.8	0.089	12.7	8.8	1.9	1	1	0	1	1	1	0	Golgi	transport	complex	subunit	5
DUF948	PF06103.6	gi|568165020|ref|YP_008948293.1|	-	0.024	14.4	0.2	0.024	14.4	0.2	3.6	2	1	1	3	3	2	0	Bacterial	protein	of	unknown	function	(DUF948)
Vps5	PF09325.5	gi|568165020|ref|YP_008948293.1|	-	0.025	13.8	2.1	0.041	13.1	1.4	1.3	1	0	0	1	1	1	0	Vps5	C	terminal	like
MAD	PF05557.8	gi|568165020|ref|YP_008948293.1|	-	0.031	12.3	3.8	0.042	11.9	1.3	1.4	1	1	0	1	1	1	0	Mitotic	checkpoint	protein
DUF2205	PF10224.4	gi|568165020|ref|YP_008948293.1|	-	0.032	13.8	1.5	0.2	11.2	0.2	2.5	1	1	1	2	2	2	0	Predicted	coiled-coil	protein	(DUF2205)
DUF2976	PF11190.3	gi|568165020|ref|YP_008948293.1|	-	0.032	13.7	2.3	2.5	7.6	0.0	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2976)
Ax_dynein_light	PF10211.4	gi|568165020|ref|YP_008948293.1|	-	0.032	14.0	0.5	0.38	10.5	0.2	2.0	1	1	1	2	2	2	0	Axonemal	dynein	light	chain
DUF4200	PF13863.1	gi|568165020|ref|YP_008948293.1|	-	0.034	14.0	0.7	13	5.7	0.1	2.6	1	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4200)
YtkA	PF13115.1	gi|568165020|ref|YP_008948293.1|	-	0.04	14.2	0.5	8.8	6.7	0.0	3.0	2	1	0	2	2	2	0	YtkA-like
DUF1206	PF06724.6	gi|568165020|ref|YP_008948293.1|	-	0.04	13.6	1.0	0.2	11.4	0.1	2.7	2	0	0	2	2	1	0	Domain	of	Unknown	Function	(DUF1206)
Mnd1	PF03962.10	gi|568165020|ref|YP_008948293.1|	-	0.041	13.5	0.4	0.066	12.8	0.3	1.3	1	0	0	1	1	1	0	Mnd1	family
Nsp1_C	PF05064.8	gi|568165020|ref|YP_008948293.1|	-	0.044	13.4	4.1	0.14	11.7	2.8	1.8	1	1	0	1	1	1	0	Nsp1-like	C-terminal	region
bZIP_1	PF00170.16	gi|568165020|ref|YP_008948293.1|	-	0.05	13.5	2.6	1.5	8.8	0.2	2.5	1	1	0	2	2	2	0	bZIP	transcription	factor
WXG100	PF06013.7	gi|568165020|ref|YP_008948293.1|	-	0.052	13.5	4.9	2.3	8.2	0.2	3.1	1	1	2	3	3	3	0	Proteins	of	100	residues	with	WXG
DUF4201	PF13870.1	gi|568165020|ref|YP_008948293.1|	-	0.054	12.9	0.6	0.26	10.7	0.5	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4201)
Uds1	PF15456.1	gi|568165020|ref|YP_008948293.1|	-	0.055	13.4	2.6	0.23	11.4	1.7	2.3	1	1	1	2	2	2	0	Up-regulated	During	Septation
Macoilin	PF09726.4	gi|568165020|ref|YP_008948293.1|	-	0.056	11.7	8.0	0.14	10.4	5.5	1.5	1	1	0	1	1	1	0	Transmembrane	protein
Surfac_D-trimer	PF09006.6	gi|568165020|ref|YP_008948293.1|	-	0.067	12.9	2.6	53	3.6	0.0	3.9	3	1	1	4	4	4	0	Lung	surfactant	protein	D	coiled-coil	trimerisation
COG2	PF06148.6	gi|568165020|ref|YP_008948293.1|	-	0.07	12.9	8.6	1.5	8.7	1.9	2.3	1	1	1	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
DUF16	PF01519.11	gi|568165020|ref|YP_008948293.1|	-	0.074	13.2	1.1	0.21	11.8	0.4	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	DUF16
DegS	PF05384.6	gi|568165020|ref|YP_008948293.1|	-	0.1	11.8	0.4	0.16	11.1	0.3	1.3	1	0	0	1	1	1	0	Sensor	protein	DegS
GOLGA2L5	PF15070.1	gi|568165020|ref|YP_008948293.1|	-	0.11	10.9	1.1	0.14	10.5	0.8	1.1	1	0	0	1	1	1	0	Putative	golgin	subfamily	A	member	2-like	protein	5
ALIX_LYPXL_bnd	PF13949.1	gi|568165020|ref|YP_008948293.1|	-	0.12	11.3	5.5	0.17	10.7	3.8	1.2	1	0	0	1	1	1	0	ALIX	V-shaped	domain	binding	to	HIV
NTR2	PF15458.1	gi|568165020|ref|YP_008948293.1|	-	0.12	11.5	6.7	0.8	8.8	1.3	2.1	1	1	1	2	2	2	0	Nineteen	complex-related	protein	2
Cep57_MT_bd	PF06657.8	gi|568165020|ref|YP_008948293.1|	-	0.13	12.2	1.3	13	5.7	0.1	2.2	1	1	1	2	2	2	0	Centrosome	microtubule-binding	domain	of	Cep57
Tektin	PF03148.9	gi|568165020|ref|YP_008948293.1|	-	0.14	10.6	4.2	0.58	8.6	0.7	2.0	1	1	1	2	2	2	0	Tektin	family
Med4	PF10018.4	gi|568165020|ref|YP_008948293.1|	-	0.15	11.4	5.2	1.2	8.5	3.6	2.0	1	1	0	1	1	1	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
DUF4618	PF15397.1	gi|568165020|ref|YP_008948293.1|	-	0.18	11.1	4.9	0.88	8.8	3.3	1.9	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4618)
HR1	PF02185.11	gi|568165020|ref|YP_008948293.1|	-	0.22	11.3	11.2	1.7	8.4	1.2	2.6	1	1	1	2	2	2	0	Hr1	repeat
AKNA	PF12443.3	gi|568165020|ref|YP_008948293.1|	-	0.22	11.5	1.6	17	5.5	0.0	2.3	1	1	1	2	2	2	0	AT-hook-containing	transcription	factor
Striatin	PF08232.7	gi|568165020|ref|YP_008948293.1|	-	0.24	11.7	0.7	1.3	9.3	0.5	2.0	1	1	0	1	1	1	0	Striatin	family
Cluap1	PF10234.4	gi|568165020|ref|YP_008948293.1|	-	0.25	10.5	4.5	0.46	9.6	3.1	1.3	1	0	0	1	1	1	0	Clusterin-associated	protein-1
Mod_r	PF07200.8	gi|568165020|ref|YP_008948293.1|	-	0.27	11.1	5.1	0.44	10.4	3.5	1.3	1	0	0	1	1	1	0	Modifier	of	rudimentary	(Mod(r))	protein
Phage_GP20	PF06810.6	gi|568165020|ref|YP_008948293.1|	-	0.28	10.6	2.3	11	5.4	0.3	2.2	1	1	1	2	2	2	0	Phage	minor	structural	protein	GP20
GLE1	PF07817.8	gi|568165020|ref|YP_008948293.1|	-	0.33	9.8	5.4	2.8	6.8	1.5	2.2	1	1	1	2	2	2	0	GLE1-like	protein
DASH_Dam1	PF08653.5	gi|568165020|ref|YP_008948293.1|	-	0.33	10.7	5.8	19	5.0	0.4	3.0	1	1	2	3	3	3	0	DASH	complex	subunit	Dam1
Syntaxin	PF00804.20	gi|568165020|ref|YP_008948293.1|	-	0.35	11.0	8.7	2.7	8.2	6.0	2.1	1	1	0	1	1	1	0	Syntaxin
DUF3244	PF11589.3	gi|568165020|ref|YP_008948293.1|	-	0.37	10.5	6.6	0.36	10.5	0.1	3.3	3	1	1	4	4	2	0	Domain	of	unknown	function	(DUF3244)
Vps52	PF04129.7	gi|568165020|ref|YP_008948293.1|	-	0.39	9.1	7.1	0.6	8.5	4.9	1.4	1	0	0	1	1	1	0	Vps52	/	Sac2	family
MbeD_MobD	PF04899.7	gi|568165020|ref|YP_008948293.1|	-	0.58	10.0	10.3	4.4	7.2	0.4	3.2	1	1	2	3	3	3	0	MbeD/MobD	like
DUF4631	PF15450.1	gi|568165020|ref|YP_008948293.1|	-	0.59	8.3	4.2	7.6	4.6	3.1	1.9	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4631)
Syntaxin-6_N	PF09177.6	gi|568165020|ref|YP_008948293.1|	-	0.6	10.5	5.9	4.8	7.6	1.8	2.3	1	1	1	2	2	2	0	Syntaxin	6,	N-terminal
RmuC	PF02646.11	gi|568165020|ref|YP_008948293.1|	-	0.72	8.6	6.7	1.9	7.2	2.2	2.1	1	1	1	2	2	2	0	RmuC	family
Rootletin	PF15035.1	gi|568165020|ref|YP_008948293.1|	-	0.76	9.7	4.7	1.2	9.0	3.2	1.2	1	0	0	1	1	1	0	Ciliary	rootlet	component,	centrosome	cohesion
SF-assemblin	PF06705.6	gi|568165020|ref|YP_008948293.1|	-	0.78	8.8	5.1	1.8	7.6	3.5	1.5	1	1	0	1	1	1	0	SF-assemblin/beta	giardin
Cortex-I_coil	PF09304.5	gi|568165020|ref|YP_008948293.1|	-	0.87	9.6	3.6	0.9	9.6	1.4	1.7	1	1	1	2	2	1	0	Cortexillin	I,	coiled	coil
Sec34	PF04136.10	gi|568165020|ref|YP_008948293.1|	-	1	9.0	5.3	3.6	7.2	3.7	1.9	1	1	0	1	1	1	0	Sec34-like	family
CCDC144C	PF14915.1	gi|568165020|ref|YP_008948293.1|	-	1	8.2	9.5	4.4	6.1	3.1	2.1	1	1	1	2	2	2	0	CCDC144C	protein	coiled-coil	region
A2M_N_2	PF07703.9	gi|568165020|ref|YP_008948293.1|	-	1.1	9.1	12.4	1.2	8.8	4.8	2.9	2	1	0	2	2	2	0	Alpha-2-macroglobulin	family	N-terminal	region
Cep57_CLD_2	PF14197.1	gi|568165020|ref|YP_008948293.1|	-	1.9	8.4	4.1	26	4.8	2.9	2.4	1	1	0	1	1	1	0	Centrosome	localisation	domain	of	PPC89
FlgD_ig	PF13860.1	gi|568165020|ref|YP_008948293.1|	-	2	8.1	9.7	0.3	10.8	0.2	3.5	2	2	1	3	3	2	0	FlgD	Ig-like	domain
Med10	PF09748.4	gi|568165020|ref|YP_008948293.1|	-	2.1	8.1	11.2	3.5	7.4	5.4	2.8	1	1	0	2	2	1	0	Transcription	factor	subunit	Med10	of	Mediator	complex
Matrilin_ccoil	PF10393.4	gi|568165020|ref|YP_008948293.1|	-	2.2	7.7	3.5	2.9	7.3	0.4	2.5	2	1	0	2	2	2	0	Trimeric	coiled-coil	oligomerisation	domain	of	matrilin
HsbA	PF12296.3	gi|568165020|ref|YP_008948293.1|	-	2.7	7.8	22.9	0.11	12.3	5.5	3.7	2	2	1	3	3	2	0	Hydrophobic	surface	binding	protein	A
DUF1319	PF07028.6	gi|568165020|ref|YP_008948293.1|	-	2.8	8.1	8.1	5.2	7.2	2.5	2.6	2	1	1	3	3	2	0	Protein	of	unknown	function	(DUF1319)
H-kinase_dim	PF02895.9	gi|568165020|ref|YP_008948293.1|	-	3.3	8.1	8.7	20	5.6	1.4	2.5	1	1	1	2	2	2	0	Signal	transducing	histidine	kinase,	homodimeric	domain
MitMem_reg	PF13012.1	gi|568165020|ref|YP_008948293.1|	-	3.8	7.6	10.1	14	5.8	5.7	2.5	1	1	1	2	2	2	0	Maintenance	of	mitochondrial	structure	and	function
YlbD_coat	PF14071.1	gi|568165020|ref|YP_008948293.1|	-	9.1	6.3	11.2	47	4.0	4.3	2.8	1	1	1	2	2	2	0	Putative	coat	protein
Syntaxin_2	PF14523.1	gi|568165020|ref|YP_008948293.1|	-	9.3	6.3	15.7	91	3.1	10.9	2.4	1	1	0	1	1	1	0	Syntaxin-like	protein
Rifin_STEVOR	PF02009.11	gi|568165022|ref|YP_008948295.1|	-	0.00029	20.5	3.3	0.00048	19.8	2.3	1.4	1	0	0	1	1	1	1	Rifin/stevor	family
TMEM154	PF15102.1	gi|568165022|ref|YP_008948295.1|	-	0.0035	17.0	11.0	0.0035	17.0	7.6	2.6	2	0	0	2	2	2	1	TMEM154	protein	family
Filamin	PF00630.14	gi|568165022|ref|YP_008948295.1|	-	0.16	12.5	3.2	0.97	10.0	2.1	2.5	1	1	0	1	1	1	0	Filamin/ABP280	repeat
Amnionless	PF14828.1	gi|568165022|ref|YP_008948295.1|	-	0.19	10.1	0.4	0.29	9.5	0.3	1.2	1	0	0	1	1	1	0	Amnionless
PaREP1	PF05942.6	gi|568164710|ref|YP_008948296.1|	-	2.6e-27	94.9	2.8	3e-27	94.7	1.9	1.0	1	0	0	1	1	1	1	Archaeal	PaREP1/PaREP8	family
TPR_11	PF13414.1	gi|568164710|ref|YP_008948296.1|	-	0.055	13.1	0.6	0.15	11.7	0.2	1.8	2	0	0	2	2	2	0	TPR	repeat
HTH_3	PF01381.17	gi|568164711|ref|YP_008948297.1|	-	5e-09	35.8	0.0	1.1e-08	34.7	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.2	gi|568164711|ref|YP_008948297.1|	-	1.4e-06	28.2	0.0	2.9e-06	27.2	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_31	PF13560.1	gi|568164711|ref|YP_008948297.1|	-	1.1e-05	25.4	0.0	1.8e-05	24.8	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
NUMOD1	PF07453.8	gi|568164711|ref|YP_008948297.1|	-	0.017	14.9	0.0	0.042	13.7	0.0	1.7	1	0	0	1	1	1	0	NUMOD1	domain
HTH_37	PF13744.1	gi|568164711|ref|YP_008948297.1|	-	0.12	12.1	0.0	0.24	11.2	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
NAC	PF01849.13	gi|568164712|ref|YP_008948298.1|	-	4.3e-12	45.3	0.6	4.3e-12	45.3	0.4	2.1	3	0	0	3	3	3	1	NAC	domain
UBA	PF00627.26	gi|568164712|ref|YP_008948298.1|	-	3.7e-05	23.4	0.6	6.9e-05	22.5	0.1	1.7	2	0	0	2	2	2	1	UBA/TS-N	domain
DUF603	PF04645.7	gi|568164712|ref|YP_008948298.1|	-	0.018	15.0	1.1	0.025	14.5	0.6	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function,	DUF603
UBA_4	PF14555.1	gi|568164712|ref|YP_008948298.1|	-	0.049	13.1	0.0	0.079	12.4	0.0	1.3	1	0	0	1	1	1	0	UBA-like	domain
CUE	PF02845.11	gi|568164712|ref|YP_008948298.1|	-	0.074	12.5	0.0	0.19	11.2	0.0	1.7	1	1	1	2	2	2	0	CUE	domain
Beta-Casp	PF10996.3	gi|568164713|ref|YP_008948299.1|	-	4.3e-23	81.6	0.0	1.3e-22	80.0	0.0	1.8	2	0	0	2	2	2	1	Beta-Casp	domain
Lactamase_B_2	PF12706.2	gi|568164713|ref|YP_008948299.1|	-	3.5e-14	52.8	0.0	6.9e-14	51.8	0.0	1.4	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
RMMBL	PF07521.7	gi|568164713|ref|YP_008948299.1|	-	2.9e-12	46.1	0.0	5.9e-12	45.2	0.0	1.5	1	0	0	1	1	1	1	RNA-metabolising	metallo-beta-lactamase
Lactamase_B	PF00753.22	gi|568164713|ref|YP_008948299.1|	-	3.1e-12	46.5	0.1	1.3e-11	44.5	0.0	2.0	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
PDEase_II	PF02112.10	gi|568164713|ref|YP_008948299.1|	-	5.1e-05	22.3	0.0	0.00011	21.2	0.0	1.6	1	0	0	1	1	1	1	cAMP	phosphodiesterases	class-II
Lactamase_B_3	PF13483.1	gi|568164713|ref|YP_008948299.1|	-	0.00093	18.9	0.0	0.0016	18.1	0.0	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
tRNA-Thr_ED	PF08915.6	gi|568164714|ref|YP_008948300.1|	-	9e-52	174.7	0.2	1.5e-51	173.9	0.1	1.4	1	0	0	1	1	1	1	Archaea-specific	editing	domain	of	threonyl-tRNA	synthetase
HGTP_anticodon	PF03129.15	gi|568164714|ref|YP_008948300.1|	-	3.6e-16	58.8	0.2	1e-15	57.4	0.1	1.8	1	0	0	1	1	1	1	Anticodon	binding	domain
DUF1107	PF06526.7	gi|568164714|ref|YP_008948300.1|	-	0.066	13.0	0.1	0.61	9.9	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1107)
SIS	PF01380.17	gi|568164715|ref|YP_008948301.1|	-	3.9e-44	149.4	1.6	2.3e-24	85.4	0.1	2.5	2	0	0	2	2	2	2	SIS	domain
GATase_6	PF13522.1	gi|568164715|ref|YP_008948301.1|	-	2.6e-23	82.4	0.0	6.3e-23	81.1	0.0	1.7	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_2	PF00310.16	gi|568164715|ref|YP_008948301.1|	-	3e-23	82.1	0.1	1.2e-15	57.0	0.0	2.8	2	1	1	3	3	3	2	Glutamine	amidotransferases	class-II
GATase_7	PF13537.1	gi|568164715|ref|YP_008948301.1|	-	4.8e-20	71.5	0.0	1.6e-19	69.9	0.0	1.9	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
SIS_2	PF13580.1	gi|568164715|ref|YP_008948301.1|	-	1.7e-08	34.2	0.1	3.1e-05	23.7	0.0	3.3	2	1	1	3	3	3	1	SIS	domain
GATase_4	PF13230.1	gi|568164715|ref|YP_008948301.1|	-	3.7e-06	25.8	0.0	6.1e-06	25.1	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
Transport_MerF	PF11431.3	gi|568164715|ref|YP_008948301.1|	-	0.089	12.4	0.1	0.18	11.5	0.0	1.4	1	0	0	1	1	1	0	Membrane	transport	protein	MerF
GHMP_kinases_N	PF00288.21	gi|568164716|ref|YP_008948302.1|	-	1e-10	41.5	0.1	2.5e-10	40.2	0.0	1.7	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|568164716|ref|YP_008948302.1|	-	2.1e-10	40.6	0.1	6.2e-10	39.1	0.1	1.8	2	0	0	2	2	2	1	GHMP	kinases	C	terminal
DUF4468	PF14730.1	gi|568164716|ref|YP_008948302.1|	-	0.041	13.5	0.1	0.11	12.1	0.1	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4468)	with	TBP-like	fold
NTP_transferase	PF00483.18	gi|568164717|ref|YP_008948303.1|	-	5.7e-16	58.5	0.2	6.4e-15	55.1	0.0	2.1	1	1	1	2	2	2	1	Nucleotidyl	transferase
Hexapep	PF00132.19	gi|568164717|ref|YP_008948303.1|	-	7.7e-15	53.6	15.8	3.3e-08	32.6	0.5	4.9	2	1	3	5	5	5	4	Bacterial	transferase	hexapeptide	(six	repeats)
NTP_transf_3	PF12804.2	gi|568164717|ref|YP_008948303.1|	-	6.3e-13	49.1	0.0	9.8e-13	48.4	0.0	1.4	1	1	0	1	1	1	1	MobA-like	NTP	transferase	domain
Fucokinase	PF07959.7	gi|568164717|ref|YP_008948303.1|	-	0.00092	17.8	2.6	0.0025	16.4	0.4	2.1	1	1	1	2	2	2	1	L-fucokinase
Glycos_transf_2	PF00535.21	gi|568164717|ref|YP_008948303.1|	-	0.0024	17.5	0.1	0.0038	16.9	0.1	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Hexapep_2	PF14602.1	gi|568164717|ref|YP_008948303.1|	-	0.018	14.6	5.8	2.2	7.9	0.2	3.7	2	1	1	3	3	3	0	Hexapeptide	repeat	of	succinyl-transferase
CofC	PF01983.11	gi|568164717|ref|YP_008948303.1|	-	0.032	13.2	2.5	0.068	12.1	0.2	2.1	2	0	0	2	2	2	0	Guanylyl	transferase	CofC	like
Baculo_Y142	PF04913.7	gi|568164717|ref|YP_008948303.1|	-	0.096	11.0	0.0	0.14	10.4	0.0	1.1	1	0	0	1	1	1	0	Baculovirus	Y142	protein
UBN2	PF14223.1	gi|568164718|ref|YP_008948304.1|	-	0.09	12.5	0.6	0.11	12.2	0.4	1.2	1	0	0	1	1	1	0	gag-polypeptide	of	LTR	copia-type
Semialdhyde_dh	PF01118.19	gi|568164719|ref|YP_008948306.1|	-	1.5e-30	105.9	0.0	1.6e-29	102.7	0.0	2.4	2	1	1	3	3	3	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
Semialdhyde_dhC	PF02774.13	gi|568164719|ref|YP_008948306.1|	-	2.4e-23	82.9	0.0	3.5e-23	82.4	0.0	1.2	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	dimerisation	domain
Gp_dh_C	PF02800.15	gi|568164719|ref|YP_008948306.1|	-	0.016	14.6	0.0	0.091	12.2	0.0	2.2	2	0	0	2	2	2	0	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
Methyltransf_11	PF08241.7	gi|568164720|ref|YP_008948307.1|	-	3e-16	59.6	0.0	1.6e-15	57.3	0.0	2.0	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|568164720|ref|YP_008948307.1|	-	2.8e-14	52.9	0.1	5.2e-14	52.1	0.1	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|568164720|ref|YP_008948307.1|	-	5e-14	52.3	0.0	7.2e-14	51.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|568164720|ref|YP_008948307.1|	-	2.6e-13	50.2	0.0	4.8e-13	49.3	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|568164720|ref|YP_008948307.1|	-	1.5e-12	48.0	0.0	3.2e-12	47.0	0.0	1.5	2	0	0	2	2	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|568164720|ref|YP_008948307.1|	-	1.2e-10	41.6	0.0	2.3e-10	40.8	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|568164720|ref|YP_008948307.1|	-	3.6e-09	36.0	0.0	6e-09	35.3	0.0	1.3	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
TehB	PF03848.9	gi|568164720|ref|YP_008948307.1|	-	1.7e-06	27.3	0.1	2.6e-06	26.7	0.1	1.2	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
MTS	PF05175.9	gi|568164720|ref|YP_008948307.1|	-	6.2e-06	25.6	0.0	1.1e-05	24.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_26	PF13659.1	gi|568164720|ref|YP_008948307.1|	-	8.4e-06	25.8	0.0	1.4e-05	25.1	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
CheR	PF01739.13	gi|568164720|ref|YP_008948307.1|	-	1.8e-05	24.0	0.3	0.0092	15.2	0.1	2.4	1	1	1	2	2	2	2	CheR	methyltransferase,	SAM	binding	domain
N6_N4_Mtase	PF01555.13	gi|568164720|ref|YP_008948307.1|	-	0.0001	21.9	0.0	0.087	12.2	0.0	2.3	2	0	0	2	2	2	2	DNA	methylase
NodS	PF05401.6	gi|568164720|ref|YP_008948307.1|	-	0.00025	20.5	0.0	0.0004	19.8	0.0	1.3	1	0	0	1	1	1	1	Nodulation	protein	S	(NodS)
CMAS	PF02353.15	gi|568164720|ref|YP_008948307.1|	-	0.00085	18.4	0.0	0.0013	17.8	0.0	1.3	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
N2227	PF07942.7	gi|568164720|ref|YP_008948307.1|	-	0.0018	17.2	0.1	0.057	12.3	0.0	2.5	1	1	1	2	2	2	1	N2227-like	protein
Methyltransf_32	PF13679.1	gi|568164720|ref|YP_008948307.1|	-	0.0042	16.7	0.0	0.0053	16.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_PK	PF05891.7	gi|568164720|ref|YP_008948307.1|	-	0.0051	16.1	0.1	0.0076	15.5	0.0	1.2	1	0	0	1	1	1	1	AdoMet	dependent	proline	di-methyltransferase
MethyltransfD12	PF02086.10	gi|568164720|ref|YP_008948307.1|	-	0.0098	15.3	0.1	0.016	14.7	0.1	1.3	1	0	0	1	1	1	1	D12	class	N6	adenine-specific	DNA	methyltransferase
TrkA_N	PF02254.13	gi|568164720|ref|YP_008948307.1|	-	0.02	14.8	0.0	0.051	13.5	0.0	1.6	2	0	0	2	2	1	0	TrkA-N	domain
OCD_Mu_crystall	PF02423.10	gi|568164721|ref|YP_008948308.1|	-	1.2e-41	142.5	0.1	1.5e-41	142.2	0.1	1.1	1	0	0	1	1	1	1	Ornithine	cyclodeaminase/mu-crystallin	family
Shikimate_DH	PF01488.15	gi|568164721|ref|YP_008948308.1|	-	9.5e-05	22.5	0.0	0.00019	21.5	0.0	1.5	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|568164721|ref|YP_008948308.1|	-	0.0012	18.0	0.0	0.0023	17.0	0.0	1.5	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Ssl1	PF04056.9	gi|568164721|ref|YP_008948308.1|	-	0.12	11.9	0.0	0.19	11.2	0.0	1.3	1	0	0	1	1	1	0	Ssl1-like
Cob_adeno_trans	PF01923.13	gi|568164722|ref|YP_008948309.1|	-	9.7e-49	165.2	0.0	1.1e-48	165.0	0.0	1.0	1	0	0	1	1	1	1	Cobalamin	adenosyltransferase
DUF848	PF05852.6	gi|568164722|ref|YP_008948309.1|	-	0.037	13.8	0.6	0.055	13.3	0.2	1.4	1	1	0	1	1	1	0	Gammaherpesvirus	protein	of	unknown	function	(DUF848)
DUF677	PF05055.7	gi|568164722|ref|YP_008948309.1|	-	0.084	11.5	0.0	0.095	11.3	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF677)
Peptidase_S8	PF00082.17	gi|568164723|ref|YP_008948310.1|	-	4.1e-07	29.4	2.1	7.2e-07	28.6	0.5	2.0	2	0	0	2	2	2	1	Subtilase	family
Iso_dh	PF00180.15	gi|568164724|ref|YP_008948311.1|	-	5.4e-104	347.8	0.1	6.5e-104	347.6	0.1	1.0	1	0	0	1	1	1	1	Isocitrate/isopropylmalate	dehydrogenase
Dodecin	PF07311.7	gi|568164724|ref|YP_008948311.1|	-	0.24	11.4	1.5	0.54	10.3	0.1	2.2	2	0	0	2	2	2	0	Dodecin