#                                                                           --- full sequence ---- --- best 1 domain ---- --- domain number estimation ----
# target name        accession  query name                       accession    E-value  score  bias   E-value  score  bias   exp reg clu  ov env dom rep inc description of target
#------------------- ----------             -------------------- ---------- --------- ------ ----- --------- ------ -----   --- --- --- --- --- --- --- --- ---------------------
Cdc6_C	PF09079.6	gi|297526029|ref|YP_003668053.1|	-	2.6e-22	78.3	3.2	7.5e-22	76.8	0.1	3.1	3	1	1	4	4	4	1	CDC6,	C	terminal
AAA_16	PF13191.1	gi|297526029|ref|YP_003668053.1|	-	6.9e-11	42.4	0.3	9.7e-10	38.7	0.1	2.4	2	1	0	2	2	2	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|297526029|ref|YP_003668053.1|	-	1.2e-09	38.4	0.0	2.8e-09	37.1	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|297526029|ref|YP_003668053.1|	-	6.2e-09	36.1	0.0	2e-08	34.5	0.0	1.9	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Arch_ATPase	PF01637.13	gi|297526029|ref|YP_003668053.1|	-	3.2e-07	30.3	1.5	4.3e-07	29.8	0.2	2.0	2	0	0	2	2	2	1	Archaeal	ATPase
AAA_5	PF07728.9	gi|297526029|ref|YP_003668053.1|	-	0.00027	20.6	0.1	0.00073	19.2	0.1	1.9	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
DUF2075	PF09848.4	gi|297526029|ref|YP_003668053.1|	-	0.0011	18.0	0.0	0.0015	17.5	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
IstB_IS21	PF01695.12	gi|297526029|ref|YP_003668053.1|	-	0.0019	17.6	0.0	0.54	9.6	0.0	2.5	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
NACHT	PF05729.7	gi|297526029|ref|YP_003668053.1|	-	0.0025	17.5	0.0	0.0047	16.5	0.0	1.4	1	0	0	1	1	1	1	NACHT	domain
AAA_19	PF13245.1	gi|297526029|ref|YP_003668053.1|	-	0.0025	17.5	0.4	0.0099	15.6	0.3	2.1	1	0	0	1	1	1	1	Part	of	AAA	domain
NB-ARC	PF00931.17	gi|297526029|ref|YP_003668053.1|	-	0.0033	16.3	0.0	0.0059	15.5	0.0	1.4	1	0	0	1	1	1	1	NB-ARC	domain
AAA_18	PF13238.1	gi|297526029|ref|YP_003668053.1|	-	0.0033	17.7	0.1	0.0096	16.2	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
TIP49	PF06068.8	gi|297526029|ref|YP_003668053.1|	-	0.0035	16.1	0.3	0.011	14.5	0.2	1.7	1	1	1	2	2	2	1	TIP49	C-terminus
DUF815	PF05673.8	gi|297526029|ref|YP_003668053.1|	-	0.0035	16.3	0.0	0.0059	15.5	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF815)
DEAD	PF00270.24	gi|297526029|ref|YP_003668053.1|	-	0.0037	16.7	0.2	2.8	7.4	0.1	2.4	1	1	0	2	2	2	2	DEAD/DEAH	box	helicase
Sigma54_activat	PF00158.21	gi|297526029|ref|YP_003668053.1|	-	0.0041	16.5	0.0	0.0079	15.6	0.0	1.5	1	0	0	1	1	1	1	Sigma-54	interaction	domain
AAA_17	PF13207.1	gi|297526029|ref|YP_003668053.1|	-	0.011	16.5	3.5	0.043	14.6	2.4	2.2	1	1	0	1	1	1	0	AAA	domain
AAA_25	PF13481.1	gi|297526029|ref|YP_003668053.1|	-	0.016	14.6	1.1	3	7.2	0.3	3.2	2	1	0	2	2	2	0	AAA	domain
AAA_24	PF13479.1	gi|297526029|ref|YP_003668053.1|	-	0.027	14.0	0.0	0.046	13.3	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.7	gi|297526029|ref|YP_003668053.1|	-	0.045	12.8	0.0	0.086	11.9	0.0	1.5	1	0	0	1	1	1	0	Zeta	toxin
ABC_tran	PF00005.22	gi|297526029|ref|YP_003668053.1|	-	0.065	13.5	1.5	2.4	8.4	0.1	3.1	2	2	1	3	3	3	0	ABC	transporter
Bac_DnaA	PF00308.13	gi|297526029|ref|YP_003668053.1|	-	0.07	12.7	0.0	5.7	6.5	0.0	2.2	2	0	0	2	2	2	0	Bacterial	dnaA	protein
RNA_helicase	PF00910.17	gi|297526029|ref|YP_003668053.1|	-	0.07	13.3	0.0	0.19	11.8	0.0	1.8	1	0	0	1	1	1	0	RNA	helicase
DUF99	PF01949.11	gi|297526030|ref|YP_003668054.1|	-	6.2e-55	185.2	0.0	7.2e-55	185.0	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF99
Radical_SAM	PF04055.16	gi|297526031|ref|YP_003668055.1|	-	5.9e-22	78.5	2.2	6.5e-21	75.2	0.0	3.0	3	0	0	3	3	3	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|297526031|ref|YP_003668055.1|	-	7.2e-10	38.9	0.6	2.3e-09	37.2	0.0	2.1	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|297526031|ref|YP_003668055.1|	-	5.5e-09	36.2	0.4	1.1e-08	35.2	0.0	1.7	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
PPR_2	PF13041.1	gi|297526032|ref|YP_003668056.1|	-	0.082	12.8	0.0	0.16	11.9	0.0	1.5	1	0	0	1	1	1	0	PPR	repeat	family
YscK	PF06578.7	gi|297526032|ref|YP_003668056.1|	-	0.13	11.6	0.0	0.14	11.5	0.0	1.0	1	0	0	1	1	1	0	YOP	proteins	translocation	protein	K	(YscK)
PAPS_reduct	PF01507.14	gi|297526033|ref|YP_003668057.1|	-	6.7e-31	107.4	0.0	1.1e-30	106.6	0.0	1.4	1	0	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
QueC	PF06508.8	gi|297526033|ref|YP_003668057.1|	-	0.018	14.3	0.0	0.029	13.6	0.0	1.3	1	0	0	1	1	1	0	Queuosine	biosynthesis	protein	QueC
NAD_synthase	PF02540.12	gi|297526033|ref|YP_003668057.1|	-	0.036	12.9	0.0	0.056	12.3	0.0	1.3	1	0	0	1	1	1	0	NAD	synthase
ATP_bind_3	PF01171.15	gi|297526033|ref|YP_003668057.1|	-	0.042	13.3	0.0	0.074	12.5	0.0	1.4	1	0	0	1	1	1	0	PP-loop	family
Ribosomal_S10	PF00338.17	gi|297526033|ref|YP_003668057.1|	-	0.11	12.3	0.1	0.25	11.2	0.1	1.5	1	0	0	1	1	1	0	Ribosomal	protein	S10p/S20e
DUF1152	PF06626.7	gi|297526034|ref|YP_003668058.1|	-	5.7e-120	399.9	0.1	6.6e-120	399.7	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1152)
AAA_18	PF13238.1	gi|297526035|ref|YP_003668059.1|	-	2.2e-23	82.9	0.6	3e-23	82.5	0.2	1.4	2	0	0	2	2	1	1	AAA	domain
AAA_17	PF13207.1	gi|297526035|ref|YP_003668059.1|	-	3.6e-13	50.3	0.3	5.7e-13	49.7	0.2	1.4	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|297526035|ref|YP_003668059.1|	-	7.4e-09	35.8	0.1	3.7e-08	33.6	0.0	1.9	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_28	PF13521.1	gi|297526035|ref|YP_003668059.1|	-	2.8e-07	30.6	0.0	1.7e-06	28.0	0.0	1.9	1	1	1	2	2	2	1	AAA	domain
KTI12	PF08433.5	gi|297526035|ref|YP_003668059.1|	-	1.5e-05	24.3	0.8	0.00018	20.8	0.2	2.0	2	0	0	2	2	2	1	Chromatin	associated	protein	KTI12
Zeta_toxin	PF06414.7	gi|297526035|ref|YP_003668059.1|	-	3.8e-05	22.8	0.0	7.4e-05	21.9	0.0	1.5	2	0	0	2	2	1	1	Zeta	toxin
SKI	PF01202.17	gi|297526035|ref|YP_003668059.1|	-	3.9e-05	23.5	0.2	0.00024	21.0	0.1	2.0	1	1	0	1	1	1	1	Shikimate	kinase
AAA_33	PF13671.1	gi|297526035|ref|YP_003668059.1|	-	9.5e-05	22.2	0.0	0.00017	21.4	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|297526035|ref|YP_003668059.1|	-	0.00017	21.4	0.3	0.00034	20.5	0.1	1.5	2	0	0	2	2	1	1	AAA	domain
T2SE	PF00437.15	gi|297526035|ref|YP_003668059.1|	-	0.0016	17.3	0.1	0.0027	16.6	0.0	1.5	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_19	PF13245.1	gi|297526035|ref|YP_003668059.1|	-	0.0021	17.7	0.8	0.0036	17.0	0.6	1.4	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_22	PF13401.1	gi|297526035|ref|YP_003668059.1|	-	0.0024	18.0	0.4	0.0064	16.6	0.3	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_24	PF13479.1	gi|297526035|ref|YP_003668059.1|	-	0.0027	17.3	0.5	0.007	15.9	0.1	1.8	2	0	0	2	2	2	1	AAA	domain
DUF2075	PF09848.4	gi|297526035|ref|YP_003668059.1|	-	0.0063	15.5	0.0	0.0081	15.1	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
CPT	PF07931.7	gi|297526035|ref|YP_003668059.1|	-	0.0066	16.0	0.0	0.29	10.7	0.0	2.1	2	0	0	2	2	2	1	Chloramphenicol	phosphotransferase-like	protein
AAA_5	PF07728.9	gi|297526035|ref|YP_003668059.1|	-	0.0082	15.8	0.0	0.015	14.9	0.0	1.6	2	0	0	2	2	1	1	AAA	domain	(dynein-related	subfamily)
ABC_tran	PF00005.22	gi|297526035|ref|YP_003668059.1|	-	0.0085	16.3	0.5	0.011	16.0	0.3	1.5	1	1	0	1	1	1	1	ABC	transporter
Thymidylate_kin	PF02223.12	gi|297526035|ref|YP_003668059.1|	-	0.012	15.0	3.1	0.48	9.7	0.6	2.9	1	1	1	2	2	2	0	Thymidylate	kinase
cobW	PF02492.14	gi|297526035|ref|YP_003668059.1|	-	0.018	14.5	0.3	0.043	13.2	0.1	1.7	2	1	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
TIP49	PF06068.8	gi|297526035|ref|YP_003668059.1|	-	0.018	13.7	0.1	0.035	12.8	0.1	1.5	1	0	0	1	1	1	0	TIP49	C-terminus
KaiC	PF06745.8	gi|297526035|ref|YP_003668059.1|	-	0.02	14.0	8.1	2.2	7.3	3.8	2.9	2	1	0	2	2	2	0	KaiC
RuvB_N	PF05496.7	gi|297526035|ref|YP_003668059.1|	-	0.026	13.5	0.0	0.043	12.8	0.0	1.4	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
RNA_helicase	PF00910.17	gi|297526035|ref|YP_003668059.1|	-	0.038	14.1	0.0	0.07	13.3	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
AAA_30	PF13604.1	gi|297526035|ref|YP_003668059.1|	-	0.04	13.4	0.1	0.069	12.7	0.1	1.4	1	0	0	1	1	1	0	AAA	domain
APS_kinase	PF01583.15	gi|297526035|ref|YP_003668059.1|	-	0.041	13.5	0.1	0.24	11.0	0.0	2.0	2	0	0	2	2	2	0	Adenylylsulphate	kinase
AAA_3	PF07726.6	gi|297526035|ref|YP_003668059.1|	-	0.045	13.3	0.0	0.2	11.2	0.0	2.0	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ADK	PF00406.17	gi|297526035|ref|YP_003668059.1|	-	0.059	13.2	0.5	0.22	11.3	0.1	2.1	1	1	1	2	2	2	0	Adenylate	kinase
NACHT	PF05729.7	gi|297526035|ref|YP_003668059.1|	-	0.061	12.9	0.0	0.17	11.5	0.0	1.7	2	0	0	2	2	1	0	NACHT	domain
PRK	PF00485.13	gi|297526035|ref|YP_003668059.1|	-	0.062	12.8	0.0	0.11	11.9	0.0	1.5	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
Cellulase	PF00150.13	gi|297526035|ref|YP_003668059.1|	-	0.065	12.4	0.1	0.075	12.2	0.0	1.2	1	0	0	1	1	1	0	Cellulase	(glycosyl	hydrolase	family	5)
MobB	PF03205.9	gi|297526035|ref|YP_003668059.1|	-	0.068	12.8	1.3	0.19	11.4	0.3	1.9	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
NTPase_1	PF03266.10	gi|297526035|ref|YP_003668059.1|	-	0.068	12.8	0.9	0.068	12.8	0.6	2.5	2	1	1	3	3	3	0	NTPase
Cytidylate_kin2	PF13189.1	gi|297526035|ref|YP_003668059.1|	-	0.07	13.0	1.1	0.25	11.2	0.7	2.2	1	1	0	1	1	1	0	Cytidylate	kinase-like	family
AAA_11	PF13086.1	gi|297526035|ref|YP_003668059.1|	-	0.072	12.6	0.0	0.093	12.2	0.0	1.2	1	1	0	1	1	1	0	AAA	domain
AAA_16	PF13191.1	gi|297526035|ref|YP_003668059.1|	-	0.082	12.8	0.0	0.12	12.3	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_25	PF13481.1	gi|297526035|ref|YP_003668059.1|	-	0.093	12.1	4.3	0.12	11.7	0.7	2.2	1	1	1	2	2	2	0	AAA	domain
SRP54	PF00448.17	gi|297526035|ref|YP_003668059.1|	-	0.094	12.1	0.3	0.094	12.1	0.2	1.9	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
Sulfotransfer_1	PF00685.22	gi|297526035|ref|YP_003668059.1|	-	0.11	11.6	0.0	0.17	11.0	0.0	1.3	1	0	0	1	1	1	0	Sulfotransferase	domain
Viral_helicase1	PF01443.13	gi|297526035|ref|YP_003668059.1|	-	0.12	11.8	0.0	0.22	11.0	0.0	1.4	2	0	0	2	2	1	0	Viral	(Superfamily	1)	RNA	helicase
ATP-synt_ab	PF00006.20	gi|297526035|ref|YP_003668059.1|	-	0.13	11.7	0.0	0.15	11.5	0.0	1.2	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
UPF0079	PF02367.12	gi|297526035|ref|YP_003668059.1|	-	0.27	10.8	1.2	0.55	9.8	0.8	1.7	1	1	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
DUF87	PF01935.12	gi|297526035|ref|YP_003668059.1|	-	1.1	9.0	6.5	21	4.8	3.6	2.4	2	1	1	3	3	2	0	Domain	of	unknown	function	DUF87
MMR_HSR1	PF01926.18	gi|297526036|ref|YP_003668060.1|	-	4e-15	55.7	0.0	5.2e-11	42.5	0.0	2.3	2	0	0	2	2	2	2	50S	ribosome-binding	GTPase
FeoB_N	PF02421.13	gi|297526036|ref|YP_003668060.1|	-	1.5e-11	43.7	0.1	5.3e-05	22.5	0.0	2.1	2	0	0	2	2	2	2	Ferrous	iron	transport	protein	B
DUF258	PF03193.11	gi|297526036|ref|YP_003668060.1|	-	1.5e-08	34.0	0.0	2.2e-08	33.4	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
Dynamin_N	PF00350.18	gi|297526036|ref|YP_003668060.1|	-	3.2e-08	33.5	0.7	0.0078	16.0	0.1	3.1	2	1	1	3	3	3	2	Dynamin	family
GTP_EFTU	PF00009.22	gi|297526036|ref|YP_003668060.1|	-	7.8e-06	25.4	0.3	0.00022	20.7	0.1	2.6	1	1	1	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
MobB	PF03205.9	gi|297526036|ref|YP_003668060.1|	-	0.0013	18.4	0.4	1.7	8.3	0.0	2.4	2	0	0	2	2	2	2	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
cobW	PF02492.14	gi|297526036|ref|YP_003668060.1|	-	0.016	14.6	0.0	0.16	11.3	0.0	2.0	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
IIGP	PF05049.8	gi|297526036|ref|YP_003668060.1|	-	0.016	14.0	0.0	0.024	13.4	0.0	1.2	1	0	0	1	1	1	0	Interferon-inducible	GTPase	(IIGP)
ArgK	PF03308.11	gi|297526036|ref|YP_003668060.1|	-	0.018	13.8	0.1	0.14	10.9	0.1	2.0	1	1	1	2	2	2	0	ArgK	protein
PduV-EutP	PF10662.4	gi|297526036|ref|YP_003668060.1|	-	0.022	14.2	0.0	0.55	9.7	0.0	2.3	2	1	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_17	PF13207.1	gi|297526036|ref|YP_003668060.1|	-	0.036	14.8	0.7	0.085	13.6	0.1	2.1	2	1	0	2	2	2	0	AAA	domain
AAA_16	PF13191.1	gi|297526036|ref|YP_003668060.1|	-	0.037	14.0	0.0	0.075	13.0	0.0	1.6	1	0	0	1	1	1	0	AAA	ATPase	domain
Miro	PF08477.8	gi|297526036|ref|YP_003668060.1|	-	0.083	13.3	0.0	0.35	11.3	0.0	1.9	2	0	0	2	2	2	0	Miro-like	protein
AIG1	PF04548.11	gi|297526036|ref|YP_003668060.1|	-	0.092	11.8	0.0	0.19	10.7	0.0	1.5	2	0	0	2	2	2	0	AIG1	family
AAA_28	PF13521.1	gi|297526036|ref|YP_003668060.1|	-	0.16	11.9	0.3	0.87	9.5	0.0	2.3	3	0	0	3	3	3	0	AAA	domain
ThiF	PF00899.16	gi|297526037|ref|YP_003668061.1|	-	2.5e-46	156.8	0.1	3.5e-46	156.4	0.0	1.1	1	0	0	1	1	1	1	ThiF	family
MoeZ_MoeB	PF05237.8	gi|297526037|ref|YP_003668061.1|	-	8.3e-21	73.3	0.1	1.4e-20	72.6	0.0	1.3	1	0	0	1	1	1	1	MoeZ/MoeB	domain
Shikimate_DH	PF01488.15	gi|297526037|ref|YP_003668061.1|	-	0.0067	16.5	0.4	0.013	15.6	0.2	1.5	1	1	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
DAO	PF01266.19	gi|297526037|ref|YP_003668061.1|	-	0.013	14.3	0.1	0.016	14.0	0.0	1.2	1	0	0	1	1	1	0	FAD	dependent	oxidoreductase
2-Hacid_dh_C	PF02826.14	gi|297526037|ref|YP_003668061.1|	-	0.04	13.0	0.1	0.06	12.5	0.1	1.2	1	0	0	1	1	1	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Thi4	PF01946.12	gi|297526037|ref|YP_003668061.1|	-	0.1	11.6	0.3	0.16	11.0	0.2	1.2	1	0	0	1	1	1	0	Thi4	family
ThiS	PF02597.15	gi|297526038|ref|YP_003668062.1|	-	0.00016	22.0	0.1	0.00017	21.9	0.0	1.0	1	0	0	1	1	1	1	ThiS	family
DUF432	PF04254.8	gi|297526039|ref|YP_003668063.1|	-	4.6e-31	107.2	0.7	9.3e-31	106.3	0.5	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF432)
MS_channel	PF00924.13	gi|297526040|ref|YP_003668064.1|	-	6.8e-58	195.3	2.8	6.8e-58	195.3	1.9	1.4	2	0	0	2	2	2	1	Mechanosensitive	ion	channel
SPC12	PF06645.8	gi|297526040|ref|YP_003668064.1|	-	7.4	6.4	6.6	2.6	7.9	0.6	2.6	2	0	0	2	2	2	0	Microsomal	signal	peptidase	12	kDa	subunit	(SPC12)
NTP_transferase	PF00483.18	gi|297526041|ref|YP_003668065.1|	-	4.8e-15	55.5	0.0	6.5e-15	55.1	0.0	1.2	1	0	0	1	1	1	1	Nucleotidyl	transferase
Hexapep	PF00132.19	gi|297526041|ref|YP_003668065.1|	-	1.6e-13	49.5	14.8	2.8e-08	32.8	0.1	5.0	5	2	1	6	6	6	3	Bacterial	transferase	hexapeptide	(six	repeats)
Hexapep_2	PF14602.1	gi|297526041|ref|YP_003668065.1|	-	1.9e-06	27.3	2.7	1.9	8.1	0.0	4.4	4	0	0	4	4	4	3	Hexapeptide	repeat	of	succinyl-transferase
NTP_transf_3	PF12804.2	gi|297526041|ref|YP_003668065.1|	-	2.5e-06	27.6	0.0	3.2e-06	27.2	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
SIS	PF01380.17	gi|297526042|ref|YP_003668066.1|	-	2e-40	137.4	0.4	3.7e-23	81.5	0.4	2.3	2	0	0	2	2	2	2	SIS	domain
GATase_6	PF13522.1	gi|297526042|ref|YP_003668066.1|	-	1.6e-20	73.3	0.0	3.2e-20	72.4	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_2	PF00310.16	gi|297526042|ref|YP_003668066.1|	-	9e-20	70.6	0.1	7.2e-16	57.8	0.0	2.5	1	1	1	2	2	2	2	Glutamine	amidotransferases	class-II
GATase_7	PF13537.1	gi|297526042|ref|YP_003668066.1|	-	4.7e-17	61.8	0.0	8.3e-17	61.0	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_4	PF13230.1	gi|297526042|ref|YP_003668066.1|	-	4.6e-05	22.2	0.0	6.9e-05	21.6	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
SIS_2	PF13580.1	gi|297526042|ref|YP_003668066.1|	-	0.00047	19.8	0.0	0.0013	18.4	0.0	1.8	1	0	0	1	1	1	1	SIS	domain
AA_kinase	PF00696.23	gi|297526043|ref|YP_003668067.1|	-	1.2e-23	83.8	0.1	1.6e-23	83.5	0.1	1.1	1	0	0	1	1	1	1	Amino	acid	kinase	family
SpoU_methylase	PF00588.14	gi|297526044|ref|YP_003668068.1|	-	2.1e-30	105.4	0.0	2.7e-30	105.0	0.0	1.1	1	0	0	1	1	1	1	SpoU	rRNA	Methylase	family
Methyltrn_RNA_4	PF09936.4	gi|297526044|ref|YP_003668068.1|	-	5.9e-05	22.6	0.0	0.0056	16.1	0.0	2.2	1	1	0	1	1	1	1	SAM-dependent	RNA	methyltransferase
Semialdhyde_dh	PF01118.19	gi|297526044|ref|YP_003668068.1|	-	0.0081	16.4	0.0	0.014	15.7	0.0	1.4	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
MTS	PF05175.9	gi|297526045|ref|YP_003668069.1|	-	1.3e-15	57.1	0.0	1.6e-15	56.9	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_26	PF13659.1	gi|297526045|ref|YP_003668069.1|	-	1.2e-11	44.6	0.0	1.7e-11	44.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|297526045|ref|YP_003668069.1|	-	5e-07	29.1	0.0	6.9e-07	28.6	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_31	PF13847.1	gi|297526045|ref|YP_003668069.1|	-	5e-07	29.4	0.0	7e-07	28.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|297526045|ref|YP_003668069.1|	-	3.2e-06	27.5	0.0	6.6e-06	26.5	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|297526045|ref|YP_003668069.1|	-	4.9e-05	22.7	0.0	0.00057	19.3	0.0	2.0	2	0	0	2	2	2	1	Conserved	hypothetical	protein	95
Methyltransf_25	PF13649.1	gi|297526045|ref|YP_003668069.1|	-	0.00015	22.0	0.0	0.00029	21.1	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|297526045|ref|YP_003668069.1|	-	0.0004	20.9	0.0	0.00092	19.7	0.0	1.7	2	1	0	2	2	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|297526045|ref|YP_003668069.1|	-	0.00064	19.4	0.0	0.00098	18.8	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|297526045|ref|YP_003668069.1|	-	0.0031	17.9	0.0	0.0056	17.1	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_16	PF10294.4	gi|297526045|ref|YP_003668069.1|	-	0.0059	16.0	0.0	0.0082	15.6	0.0	1.3	1	0	0	1	1	1	1	Putative	methyltransferase
DUF633	PF04816.7	gi|297526045|ref|YP_003668069.1|	-	0.035	13.4	0.1	1.7	7.9	0.0	2.0	2	0	0	2	2	2	0	Family	of	unknown	function	(DUF633)
FtsJ	PF01728.14	gi|297526045|ref|YP_003668069.1|	-	0.055	13.4	0.0	0.061	13.3	0.0	1.3	1	1	0	1	1	1	0	FtsJ-like	methyltransferase
RrnaAD	PF00398.15	gi|297526046|ref|YP_003668070.1|	-	1.1e-36	126.1	0.0	1.3e-36	126.0	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Methyltransf_18	PF12847.2	gi|297526046|ref|YP_003668070.1|	-	0.00011	22.7	0.0	0.00018	22.0	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|297526046|ref|YP_003668070.1|	-	0.017	15.1	0.0	0.034	14.1	0.0	1.4	1	1	0	1	1	1	0	Methyltransferase	domain
MTS	PF05175.9	gi|297526046|ref|YP_003668070.1|	-	0.023	14.0	0.0	0.064	12.6	0.0	1.7	1	1	0	1	1	1	0	Methyltransferase	small	domain
Methyltransf_23	PF13489.1	gi|297526046|ref|YP_003668070.1|	-	0.036	13.7	0.0	0.093	12.4	0.0	1.7	2	0	0	2	2	2	0	Methyltransferase	domain
Dam	PF05869.6	gi|297526046|ref|YP_003668070.1|	-	0.064	12.6	0.0	0.1	12.0	0.0	1.2	1	0	0	1	1	1	0	DNA	N-6-adenine-methyltransferase	(Dam)
Methyltransf_11	PF08241.7	gi|297526046|ref|YP_003668070.1|	-	0.07	13.6	0.0	0.17	12.3	0.0	1.7	2	0	0	2	2	2	0	Methyltransferase	domain
DUF655	PF04919.7	gi|297526047|ref|YP_003668071.1|	-	1.4e-63	213.8	2.0	1.7e-63	213.6	1.4	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF655)
HHH_6	PF14579.1	gi|297526047|ref|YP_003668071.1|	-	0.00063	19.7	0.2	0.0028	17.6	0.0	1.9	1	1	1	2	2	2	1	Helix-hairpin-helix	motif
HHH_3	PF12836.2	gi|297526047|ref|YP_003668071.1|	-	0.0015	18.4	0.1	0.0031	17.4	0.1	1.6	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH	PF00633.18	gi|297526047|ref|YP_003668071.1|	-	0.071	12.8	0.1	0.21	11.3	0.1	1.8	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
RNA_pol_Rpb4	PF03874.11	gi|297526048|ref|YP_003668072.1|	-	3.1e-21	75.5	4.4	3.7e-21	75.3	3.1	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb4
HRDC	PF00570.18	gi|297526048|ref|YP_003668072.1|	-	0.0001	21.9	0.6	0.0024	17.5	0.1	2.1	1	1	1	2	2	2	1	HRDC	domain
DUF1822	PF08852.6	gi|297526048|ref|YP_003668072.1|	-	0.0092	14.8	0.2	0.0099	14.7	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1822)
DUF4476	PF14771.1	gi|297526048|ref|YP_003668072.1|	-	0.082	12.9	0.4	0.13	12.2	0.3	1.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4476)
F-box	PF00646.28	gi|297526048|ref|YP_003668072.1|	-	0.1	12.3	0.1	0.35	10.5	0.0	1.9	2	0	0	2	2	2	0	F-box	domain
SPO22	PF08631.5	gi|297526048|ref|YP_003668072.1|	-	0.15	11.0	1.9	0.19	10.7	1.3	1.1	1	0	0	1	1	1	0	Meiosis	protein	SPO22/ZIP4	like
Tropomyosin	PF00261.15	gi|297526048|ref|YP_003668072.1|	-	0.23	10.5	3.9	0.82	8.7	2.1	2.0	1	1	0	1	1	1	0	Tropomyosin
Ribosomal_L21e	PF01157.13	gi|297526049|ref|YP_003668073.1|	-	6.9e-30	102.7	1.6	7.6e-30	102.6	1.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L21e
Imm17	PF15591.1	gi|297526049|ref|YP_003668073.1|	-	0.13	12.0	0.0	0.22	11.3	0.0	1.3	1	0	0	1	1	1	0	Immunity	protein	17
TOBE_2	PF08402.5	gi|297526049|ref|YP_003668073.1|	-	0.16	11.9	0.1	9.1	6.3	0.1	2.6	3	0	0	3	3	3	0	TOBE	domain
THUMP	PF02926.12	gi|297526050|ref|YP_003668074.1|	-	1.8e-10	40.8	0.4	5.2e-10	39.3	0.2	1.8	1	0	0	1	1	1	1	THUMP	domain
Rad50_zn_hook	PF04423.9	gi|297526050|ref|YP_003668074.1|	-	3.7e-05	23.0	0.6	0.00017	20.9	0.4	2.2	1	0	0	1	1	1	1	Rad50	zinc	hook	motif
SRP54	PF00448.17	gi|297526052|ref|YP_003668076.1|	-	1.8e-75	252.7	0.0	2.5e-75	252.2	0.0	1.2	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SRP_SPB	PF02978.14	gi|297526052|ref|YP_003668076.1|	-	5.7e-30	103.6	0.6	1.6e-29	102.2	0.4	1.8	1	0	0	1	1	1	1	Signal	peptide	binding	domain
SRP54_N	PF02881.14	gi|297526052|ref|YP_003668076.1|	-	1.7e-13	50.4	0.2	1.7e-13	50.4	0.1	3.2	3	1	1	4	4	4	1	SRP54-type	protein,	helical	bundle	domain
AAA_33	PF13671.1	gi|297526052|ref|YP_003668076.1|	-	1.9e-08	34.3	0.0	7.9e-08	32.2	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
Zeta_toxin	PF06414.7	gi|297526052|ref|YP_003668076.1|	-	6.4e-08	31.9	0.0	1.5e-07	30.7	0.0	1.6	1	0	0	1	1	1	1	Zeta	toxin
CbiA	PF01656.18	gi|297526052|ref|YP_003668076.1|	-	1.9e-07	30.7	0.0	6.1e-07	29.0	0.0	1.8	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_22	PF13401.1	gi|297526052|ref|YP_003668076.1|	-	4.1e-06	26.9	0.0	1.5e-05	25.1	0.0	2.0	2	0	0	2	2	1	1	AAA	domain
cobW	PF02492.14	gi|297526052|ref|YP_003668076.1|	-	2.6e-05	23.7	0.1	0.00014	21.3	0.1	2.1	1	1	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
MobB	PF03205.9	gi|297526052|ref|YP_003668076.1|	-	0.00012	21.7	0.2	0.00057	19.6	0.0	2.2	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_31	PF13614.1	gi|297526052|ref|YP_003668076.1|	-	0.00062	19.7	0.0	0.39	10.6	0.0	2.5	1	1	0	2	2	2	1	AAA	domain
AAA_10	PF12846.2	gi|297526052|ref|YP_003668076.1|	-	0.00074	19.0	0.1	0.0046	16.4	0.1	2.0	1	1	0	1	1	1	1	AAA-like	domain
AAA_25	PF13481.1	gi|297526052|ref|YP_003668076.1|	-	0.00081	18.8	1.8	0.047	13.0	0.2	3.4	3	1	0	3	3	3	1	AAA	domain
KaiC	PF06745.8	gi|297526052|ref|YP_003668076.1|	-	0.0027	16.8	0.0	0.0084	15.2	0.0	1.8	1	1	0	1	1	1	1	KaiC
6PF2K	PF01591.13	gi|297526052|ref|YP_003668076.1|	-	0.0033	16.5	0.0	0.0064	15.5	0.0	1.4	1	0	0	1	1	1	1	6-phosphofructo-2-kinase
AAA_19	PF13245.1	gi|297526052|ref|YP_003668076.1|	-	0.0038	16.9	0.0	0.012	15.3	0.0	1.9	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_17	PF13207.1	gi|297526052|ref|YP_003668076.1|	-	0.0057	17.4	1.1	0.0057	17.4	0.7	3.1	3	1	0	3	3	2	1	AAA	domain
AAA_30	PF13604.1	gi|297526052|ref|YP_003668076.1|	-	0.0069	15.9	0.3	0.026	14.1	0.2	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|297526052|ref|YP_003668076.1|	-	0.0073	16.3	0.1	0.035	14.0	0.0	2.2	2	1	0	2	2	1	1	AAA	ATPase	domain
ArgK	PF03308.11	gi|297526052|ref|YP_003668076.1|	-	0.0093	14.7	0.0	0.45	9.2	0.0	2.4	2	0	0	2	2	2	1	ArgK	protein
APS_kinase	PF01583.15	gi|297526052|ref|YP_003668076.1|	-	0.011	15.4	0.0	0.027	14.1	0.0	1.7	1	0	0	1	1	1	0	Adenylylsulphate	kinase
KTI12	PF08433.5	gi|297526052|ref|YP_003668076.1|	-	0.026	13.7	0.0	0.052	12.7	0.0	1.5	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
Thymidylate_kin	PF02223.12	gi|297526052|ref|YP_003668076.1|	-	0.039	13.3	0.3	0.2	11.0	0.1	2.2	2	0	0	2	2	2	0	Thymidylate	kinase
AAA_24	PF13479.1	gi|297526052|ref|YP_003668076.1|	-	0.041	13.4	0.1	0.12	11.9	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|297526052|ref|YP_003668076.1|	-	0.042	14.0	1.3	0.2	11.8	0.3	2.7	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_23	PF13476.1	gi|297526052|ref|YP_003668076.1|	-	0.046	14.0	0.7	6.3	7.0	0.0	2.6	2	0	0	2	2	2	0	AAA	domain
ATP_bind_1	PF03029.12	gi|297526052|ref|YP_003668076.1|	-	0.066	12.7	0.1	0.52	9.8	0.0	2.2	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
AAA_28	PF13521.1	gi|297526052|ref|YP_003668076.1|	-	0.11	12.4	0.1	0.33	10.9	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
Clp1	PF06807.9	gi|297526052|ref|YP_003668076.1|	-	0.11	12.2	0.0	0.21	11.3	0.0	1.5	1	0	0	1	1	1	0	Pre-mRNA	cleavage	complex	II	protein	Clp1
ABC_tran	PF00005.22	gi|297526052|ref|YP_003668076.1|	-	0.12	12.6	0.0	0.33	11.2	0.0	1.7	2	0	0	2	2	1	0	ABC	transporter
SecA_DEAD	PF07517.9	gi|297526052|ref|YP_003668076.1|	-	0.13	11.5	0.4	0.42	9.8	0.1	2.0	1	1	0	1	1	1	0	SecA	DEAD-like	domain
VirC1	PF07015.6	gi|297526052|ref|YP_003668076.1|	-	0.14	11.1	0.0	0.3	10.1	0.0	1.4	1	0	0	1	1	1	0	VirC1	protein
DUF2636	PF11120.3	gi|297526053|ref|YP_003668077.1|	-	0.019	14.4	0.0	0.036	13.5	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2636)
Chordopox_RPO7	PF05864.7	gi|297526053|ref|YP_003668077.1|	-	0.1	12.7	0.0	0.47	10.5	0.0	2.0	2	0	0	2	2	2	0	Chordopoxvirus	DNA-directed	RNA	polymerase	7	kDa	polypeptide	(RPO7)
NTP_transf_2	PF01909.18	gi|297526054|ref|YP_003668078.1|	-	4e-10	39.8	0.3	7.3e-10	39.0	0.2	1.5	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
Nuc-transf	PF10127.4	gi|297526054|ref|YP_003668078.1|	-	0.027	13.8	0.0	0.031	13.6	0.0	1.1	1	0	0	1	1	1	0	Predicted	nucleotidyltransferase
SSV1_ORF_D-335	PF07935.6	gi|297526054|ref|YP_003668078.1|	-	0.08	12.6	0.1	0.28	10.9	0.0	1.9	2	0	0	2	2	2	0	ORF	D-335-like	protein
Radical_SAM	PF04055.16	gi|297526054|ref|YP_003668078.1|	-	0.084	13.0	0.2	0.14	12.2	0.2	1.6	1	1	0	1	1	1	0	Radical	SAM	superfamily
DUF294	PF03445.8	gi|297526054|ref|YP_003668078.1|	-	0.11	12.1	0.0	0.17	11.5	0.0	1.3	1	0	0	1	1	1	0	Putative	nucleotidyltransferase	DUF294
HEPN	PF05168.9	gi|297526055|ref|YP_003668079.1|	-	1.1e-29	102.7	1.7	1.2e-29	102.5	1.2	1.0	1	0	0	1	1	1	1	HEPN	domain
Lyase_1	PF00206.15	gi|297526056|ref|YP_003668080.1|	-	7.7e-49	166.5	0.1	7.7e-49	166.5	0.1	1.5	2	0	0	2	2	2	1	Lyase
ADSL_C	PF10397.4	gi|297526056|ref|YP_003668080.1|	-	2.5e-17	62.6	3.7	5.9e-17	61.4	0.5	2.9	3	0	0	3	3	3	1	Adenylosuccinate	lyase	C-terminus
FumaraseC_C	PF10415.4	gi|297526056|ref|YP_003668080.1|	-	0.042	13.9	1.0	0.44	10.6	0.0	2.8	2	0	0	2	2	2	0	Fumarase	C	C-terminus
DAO	PF01266.19	gi|297526057|ref|YP_003668081.1|	-	6.5e-13	48.3	0.9	3.2e-06	26.2	0.0	2.7	2	1	0	2	2	2	2	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.9	gi|297526057|ref|YP_003668081.1|	-	1.8e-12	47.5	0.5	3.7e-05	23.7	0.1	3.1	2	1	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|297526057|ref|YP_003668081.1|	-	9.7e-10	37.4	2.8	0.00045	18.7	0.0	2.7	3	0	0	3	3	3	2	HI0933-like	protein
GIDA	PF01134.17	gi|297526057|ref|YP_003668081.1|	-	4.1e-06	25.9	4.2	0.0047	15.8	0.0	3.1	3	0	0	3	3	3	2	Glucose	inhibited	division	protein	A
Pyr_redox_3	PF13738.1	gi|297526057|ref|YP_003668081.1|	-	1.1e-05	25.6	0.0	0.072	13.1	0.0	2.2	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_9	PF13454.1	gi|297526057|ref|YP_003668081.1|	-	6.7e-05	22.7	0.3	0.04	13.6	0.1	2.3	2	0	0	2	2	2	2	FAD-NAD(P)-binding
FAD_binding_2	PF00890.19	gi|297526057|ref|YP_003668081.1|	-	0.0007	18.5	3.4	0.0036	16.2	0.2	2.6	3	0	0	3	3	3	1	FAD	binding	domain
Lycopene_cycl	PF05834.7	gi|297526057|ref|YP_003668081.1|	-	0.0018	17.2	0.1	0.025	13.5	0.1	2.1	2	0	0	2	2	2	1	Lycopene	cyclase	protein
FAD_binding_3	PF01494.14	gi|297526057|ref|YP_003668081.1|	-	0.0042	16.1	0.0	0.0066	15.5	0.0	1.3	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox	PF00070.22	gi|297526057|ref|YP_003668081.1|	-	0.0057	17.0	0.4	0.86	10.0	0.0	2.5	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|297526057|ref|YP_003668081.1|	-	0.013	15.5	0.9	0.034	14.1	0.2	2.1	2	0	0	2	2	2	0	NAD(P)-binding	Rossmann-like	domain
Thi4	PF01946.12	gi|297526057|ref|YP_003668081.1|	-	0.018	14.1	0.1	0.037	13.1	0.1	1.5	1	0	0	1	1	1	0	Thi4	family
Adenylsucc_synt	PF00709.16	gi|297526058|ref|YP_003668082.1|	-	9.6e-80	268.2	0.1	7.4e-42	143.4	0.0	3.0	1	1	2	3	3	3	3	Adenylosuccinate	synthetase
Pribosyltran	PF00156.22	gi|297526059|ref|YP_003668083.1|	-	2.7e-20	72.3	0.1	4.7e-20	71.5	0.0	1.4	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.1	gi|297526059|ref|YP_003668083.1|	-	0.00014	21.1	0.0	0.00021	20.5	0.0	1.2	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
GATase	PF00117.23	gi|297526060|ref|YP_003668084.1|	-	1.8e-36	125.3	0.0	2.9e-36	124.7	0.0	1.3	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
GMP_synt_C	PF00958.17	gi|297526060|ref|YP_003668084.1|	-	3.6e-33	113.1	2.3	8.3e-33	111.9	0.2	2.2	2	0	0	2	2	2	1	GMP	synthase	C	terminal	domain
Peptidase_C26	PF07722.8	gi|297526060|ref|YP_003668084.1|	-	2.3e-12	46.8	0.0	6.6e-12	45.3	0.0	1.8	1	1	0	1	1	1	1	Peptidase	C26
NAD_synthase	PF02540.12	gi|297526060|ref|YP_003668084.1|	-	7.3e-12	44.6	0.1	2.4e-06	26.6	0.0	2.7	3	0	0	3	3	3	2	NAD	synthase
tRNA_Me_trans	PF03054.11	gi|297526060|ref|YP_003668084.1|	-	7.5e-05	21.4	0.1	0.00064	18.3	0.1	2.0	2	0	0	2	2	2	1	tRNA	methyl	transferase
QueC	PF06508.8	gi|297526060|ref|YP_003668084.1|	-	0.00038	19.8	0.0	0.037	13.2	0.0	2.4	2	0	0	2	2	2	1	Queuosine	biosynthesis	protein	QueC
ATP_bind_3	PF01171.15	gi|297526060|ref|YP_003668084.1|	-	0.00051	19.5	0.0	0.00078	18.9	0.0	1.4	1	0	0	1	1	1	1	PP-loop	family
ThiI	PF02568.9	gi|297526060|ref|YP_003668084.1|	-	0.011	15.2	0.0	0.054	12.9	0.0	2.0	2	0	0	2	2	2	0	Thiamine	biosynthesis	protein	(ThiI)
Asn_synthase	PF00733.16	gi|297526060|ref|YP_003668084.1|	-	0.012	15.0	0.0	0.023	14.1	0.0	1.5	1	0	0	1	1	1	0	Asparagine	synthase
Arginosuc_synth	PF00764.14	gi|297526060|ref|YP_003668084.1|	-	0.063	12.2	0.0	0.11	11.5	0.0	1.2	1	0	0	1	1	1	0	Arginosuccinate	synthase
DUF1932	PF09130.6	gi|297526060|ref|YP_003668084.1|	-	0.11	12.2	0.0	0.38	10.5	0.0	2.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1932)
PAPS_reduct	PF01507.14	gi|297526060|ref|YP_003668084.1|	-	0.13	12.0	0.0	0.31	10.8	0.0	1.7	1	1	0	1	1	1	0	Phosphoadenosine	phosphosulfate	reductase	family
SdpI	PF13630.1	gi|297526061|ref|YP_003668085.1|	-	1.5e-12	47.0	9.0	1.5e-12	47.0	6.2	4.3	4	1	1	5	5	5	1	SdpI/YhfL	protein	family
DUF1648	PF07853.6	gi|297526061|ref|YP_003668085.1|	-	5.6e-09	35.3	2.0	5.6e-09	35.3	1.4	4.3	4	1	0	4	4	4	1	Protein	of	unknown	function	(DUF1648)
PadR	PF03551.9	gi|297526062|ref|YP_003668086.1|	-	0.0015	18.2	0.0	0.0017	18.0	0.0	1.1	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
DUF3687	PF12459.3	gi|297526062|ref|YP_003668086.1|	-	0.15	11.3	3.5	0.34	10.1	2.4	1.7	1	1	0	1	1	1	0	D-Ala-teichoic	acid	biosynthesis	protein
Acyl_transf_3	PF01757.17	gi|297526063|ref|YP_003668087.1|	-	0.015	14.1	3.6	0.019	13.8	2.5	1.2	1	0	0	1	1	1	0	Acyltransferase	family
DUF1427	PF07235.6	gi|297526063|ref|YP_003668087.1|	-	0.53	10.3	6.5	0.06	13.4	1.3	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1427)
ABC2_membrane_5	PF13346.1	gi|297526063|ref|YP_003668087.1|	-	2.2	7.5	15.4	3.2	6.9	7.2	2.3	2	1	0	2	2	2	0	ABC-2	family	transporter	protein
DUF1469	PF07332.6	gi|297526063|ref|YP_003668087.1|	-	2.7	7.7	7.8	0.87	9.3	1.8	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1469)
FtsX	PF02687.16	gi|297526063|ref|YP_003668087.1|	-	5.1	6.8	17.9	6.4	6.5	0.8	2.4	1	1	1	2	2	2	0	FtsX-like	permease	family
DUF2324	PF10086.4	gi|297526064|ref|YP_003668088.1|	-	6e-09	35.4	22.3	2.4e-06	26.9	7.1	2.3	1	1	1	2	2	2	2	Putative	membrane	peptidase	family	(DUF2324)
YbjQ_1	PF01906.12	gi|297526065|ref|YP_003668089.1|	-	2.7e-39	133.8	1.0	3e-39	133.6	0.7	1.0	1	0	0	1	1	1	1	Putative	heavy-metal-binding
SeleniumBinding	PF11524.3	gi|297526065|ref|YP_003668089.1|	-	2.9e-05	24.1	0.2	0.26	11.4	0.0	2.1	2	0	0	2	2	2	2	Selenium	binding	protein
DUF4156	PF13698.1	gi|297526065|ref|YP_003668089.1|	-	0.027	14.3	0.0	0.04	13.8	0.0	1.4	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4156)
Pribosyltran	PF00156.22	gi|297526066|ref|YP_003668090.1|	-	5.6e-18	64.8	0.0	7.9e-18	64.3	0.0	1.2	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.1	gi|297526066|ref|YP_003668090.1|	-	0.024	13.8	0.0	0.061	12.5	0.0	1.6	2	0	0	2	2	2	0	Uracil	phosphoribosyltransferase
PNP_UDP_1	PF01048.15	gi|297526067|ref|YP_003668091.1|	-	1.4e-44	151.8	0.0	1.6e-44	151.6	0.0	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
YesK	PF14150.1	gi|297526069|ref|YP_003668093.1|	-	0.014	15.5	6.8	0.014	15.5	4.7	2.1	2	0	0	2	2	2	0	YesK-like	protein
Bax1-I	PF01027.15	gi|297526069|ref|YP_003668093.1|	-	0.02	14.4	13.1	0.028	14.0	9.1	1.3	1	0	0	1	1	1	0	Inhibitor	of	apoptosis-promoting	Bax1
DUF1072	PF06380.6	gi|297526069|ref|YP_003668093.1|	-	0.022	14.4	0.2	0.042	13.5	0.2	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1072)
Yip1	PF04893.12	gi|297526069|ref|YP_003668093.1|	-	0.12	11.8	13.0	0.17	11.3	9.0	1.3	1	0	0	1	1	1	0	Yip1	domain
IncA	PF04156.9	gi|297526069|ref|YP_003668093.1|	-	0.3	10.6	3.8	0.49	9.9	2.6	1.4	1	0	0	1	1	1	0	IncA	protein
FAM70	PF14967.1	gi|297526069|ref|YP_003668093.1|	-	0.82	8.8	3.8	0.31	10.1	0.7	1.6	1	1	1	2	2	2	0	FAM70	protein
DUF1516	PF07457.6	gi|297526069|ref|YP_003668093.1|	-	4.8	7.3	14.8	0.1	12.7	4.1	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1516)
RimK	PF08443.6	gi|297526070|ref|YP_003668094.1|	-	3.7e-34	117.8	0.0	4.9e-34	117.4	0.0	1.1	1	0	0	1	1	1	1	RimK-like	ATP-grasp	domain
GSH-S_ATP	PF02955.11	gi|297526070|ref|YP_003668094.1|	-	2e-10	40.0	0.0	3.4e-10	39.3	0.0	1.3	1	0	0	1	1	1	1	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
ATP-grasp_3	PF02655.9	gi|297526070|ref|YP_003668094.1|	-	5.9e-08	32.7	0.0	2.2e-07	30.9	0.0	1.8	1	1	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|297526070|ref|YP_003668094.1|	-	7.7e-08	32.2	0.0	1.2e-07	31.6	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	domain
Ins134_P3_kin	PF05770.6	gi|297526070|ref|YP_003668094.1|	-	1.4e-06	27.5	0.8	0.00028	20.0	0.1	2.2	1	1	0	2	2	2	2	Inositol	1,	3,	4-trisphosphate	5/6-kinase
ATPgrasp_Ter	PF15632.1	gi|297526070|ref|YP_003668094.1|	-	4e-06	25.7	0.0	2.8e-05	23.0	0.0	2.0	1	1	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATPgrasp_YheCD	PF14398.1	gi|297526070|ref|YP_003668094.1|	-	0.00068	18.5	0.0	0.01	14.6	0.0	2.1	2	0	0	2	2	2	1	YheC/D	like	ATP-grasp
DUF1614	PF07758.6	gi|297526071|ref|YP_003668095.1|	-	1.3e-09	38.0	9.3	1.3e-09	38.0	6.4	1.7	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF1614)
Kelch_6	PF13964.1	gi|297526071|ref|YP_003668095.1|	-	0.15	12.2	0.4	4	7.7	0.0	2.5	2	0	0	2	2	2	0	Kelch	motif
Rhomboid	PF01694.17	gi|297526073|ref|YP_003668097.1|	-	6e-30	104.2	22.4	6e-30	104.2	15.5	2.3	2	1	0	2	2	2	1	Rhomboid	family
DUF1751	PF08551.5	gi|297526073|ref|YP_003668097.1|	-	0.00022	21.4	1.0	0.00022	21.4	0.7	2.3	3	0	0	3	3	3	1	Eukaryotic	integral	membrane	protein	(DUF1751)
Metallophos	PF00149.23	gi|297526074|ref|YP_003668098.1|	-	7.4e-13	48.3	1.2	2.8e-12	46.4	0.9	1.8	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|297526074|ref|YP_003668098.1|	-	2.6e-10	40.3	0.0	4.3e-10	39.6	0.0	1.3	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
DUF4428	PF14471.1	gi|297526075|ref|YP_003668099.1|	-	3e-05	23.6	1.0	3e-05	23.6	0.7	2.2	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4428)
DZR	PF12773.2	gi|297526075|ref|YP_003668099.1|	-	0.0022	17.7	5.1	0.063	13.1	3.7	2.4	1	1	1	2	2	2	1	Double	zinc	ribbon
zf-MYND	PF01753.13	gi|297526075|ref|YP_003668099.1|	-	0.0035	17.1	0.4	0.016	15.0	0.0	2.0	1	1	0	1	1	1	1	MYND	finger
zf-BED	PF02892.10	gi|297526075|ref|YP_003668099.1|	-	0.005	16.5	4.0	0.27	11.0	0.1	2.3	2	0	0	2	2	2	1	BED	zinc	finger
DUF1272	PF06906.6	gi|297526075|ref|YP_003668099.1|	-	0.0051	16.6	7.0	0.024	14.4	4.8	2.1	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1272)
Prok-RING_1	PF14446.1	gi|297526075|ref|YP_003668099.1|	-	0.034	13.8	3.6	2.4	7.9	1.0	2.5	2	1	0	2	2	2	0	Prokaryotic	RING	finger	family	1
zf-ribbon_3	PF13248.1	gi|297526075|ref|YP_003668099.1|	-	0.041	13.0	9.6	0.89	8.8	0.4	3.0	3	0	0	3	3	3	0	zinc-ribbon	domain
RNHCP	PF12647.2	gi|297526075|ref|YP_003668099.1|	-	0.052	13.3	2.4	0.34	10.7	1.7	1.9	1	1	0	1	1	1	0	RNHCP	domain
zf-TFIIB	PF13453.1	gi|297526075|ref|YP_003668099.1|	-	0.058	12.6	4.4	2.3	7.4	0.0	2.4	2	1	0	2	2	2	0	Transcription	factor	zinc-finger
zf-LITAF-like	PF10601.4	gi|297526075|ref|YP_003668099.1|	-	0.058	13.2	3.9	1.9	8.4	0.1	2.9	3	0	0	3	3	3	0	LITAF-like	zinc	ribbon	domain
PHF5	PF03660.9	gi|297526075|ref|YP_003668099.1|	-	0.068	13.2	3.0	0.15	12.1	0.8	2.0	1	1	1	2	2	2	0	PHF5-like	protein
zinc-ribbons_6	PF07191.7	gi|297526075|ref|YP_003668099.1|	-	0.071	12.9	5.1	9.6	6.0	3.6	2.4	1	1	0	1	1	1	0	zinc-ribbons
zf-RING_3	PF14369.1	gi|297526075|ref|YP_003668099.1|	-	0.073	13.0	3.5	6.5	6.8	0.2	2.9	3	0	0	3	3	3	0	zinc-finger
zf-C3HC4_3	PF13920.1	gi|297526075|ref|YP_003668099.1|	-	0.074	12.7	6.8	1.9	8.1	4.8	2.5	1	1	1	2	2	2	0	Zinc	finger,	C3HC4	type	(RING	finger)
PyrI_C	PF02748.10	gi|297526075|ref|YP_003668099.1|	-	0.11	12.0	3.0	0.27	10.6	0.8	2.1	2	0	0	2	2	2	0	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
Rubredoxin	PF00301.15	gi|297526075|ref|YP_003668099.1|	-	0.11	12.4	5.9	6.5	6.7	1.1	2.9	2	1	0	2	2	2	0	Rubredoxin
DUF2296	PF10058.4	gi|297526075|ref|YP_003668099.1|	-	0.15	11.8	6.3	1.6	8.5	0.3	2.2	2	1	0	2	2	2	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
Zn-ribbon_8	PF09723.5	gi|297526075|ref|YP_003668099.1|	-	0.15	12.0	7.4	0.71	9.8	0.3	2.3	1	1	0	2	2	2	0	Zinc	ribbon	domain
Cytochrome_C7	PF14522.1	gi|297526075|ref|YP_003668099.1|	-	0.21	11.2	3.4	0.31	10.7	2.4	1.4	1	1	0	1	1	1	0	Cytochrome	c7
zf-RING_2	PF13639.1	gi|297526075|ref|YP_003668099.1|	-	0.22	11.3	6.8	0.93	9.3	4.7	2.1	1	1	0	1	1	1	0	Ring	finger	domain
zf-H2C2_2	PF13465.1	gi|297526075|ref|YP_003668099.1|	-	0.23	11.8	9.1	2.9	8.3	0.4	3.2	3	0	0	3	3	3	0	Zinc-finger	double	domain
zf-CHY	PF05495.7	gi|297526075|ref|YP_003668099.1|	-	0.24	11.5	0.3	0.24	11.5	0.2	2.0	1	1	0	1	1	1	0	CHY	zinc	finger
zinc_ribbon_2	PF13240.1	gi|297526075|ref|YP_003668099.1|	-	0.25	10.8	8.0	0.93	9.0	1.0	2.9	3	0	0	3	3	3	0	zinc-ribbon	domain
Sgf11	PF08209.6	gi|297526075|ref|YP_003668099.1|	-	0.27	10.5	3.3	19	4.6	0.1	3.0	3	0	0	3	3	3	0	Sgf11	(transcriptional	regulation	protein)
zf-FCS	PF06467.9	gi|297526075|ref|YP_003668099.1|	-	0.37	10.4	4.9	2.1	8.0	0.3	2.4	2	0	0	2	2	2	0	MYM-type	Zinc	finger	with	FCS	sequence	motif
Dynactin_p62	PF05502.8	gi|297526075|ref|YP_003668099.1|	-	0.43	9.3	3.5	0.46	9.1	2.5	1.1	1	0	0	1	1	1	0	Dynactin	p62	family
Metallothio_Pro	PF02069.11	gi|297526075|ref|YP_003668099.1|	-	0.47	10.3	5.0	1	9.1	3.5	1.8	1	1	0	1	1	1	0	Prokaryotic	metallothionein
OrfB_Zn_ribbon	PF07282.6	gi|297526075|ref|YP_003668099.1|	-	0.51	10.0	4.6	0.78	9.4	0.9	2.1	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
zf-RING_5	PF14634.1	gi|297526075|ref|YP_003668099.1|	-	0.54	10.0	8.8	33	4.3	6.2	2.8	1	1	0	1	1	1	0	zinc-RING	finger	domain
zf-IS66	PF13005.2	gi|297526075|ref|YP_003668099.1|	-	0.69	9.9	0.1	0.69	9.9	0.1	2.4	3	0	0	3	3	2	0	zinc-finger	binding	domain	of	transposase	IS66
zf-Mss51	PF13824.1	gi|297526075|ref|YP_003668099.1|	-	0.72	9.7	5.6	26	4.7	4.5	2.7	2	1	0	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
zf-C3HC4_2	PF13923.1	gi|297526075|ref|YP_003668099.1|	-	0.9	9.6	5.0	6.1	6.9	3.5	2.3	1	1	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
BIR	PF00653.16	gi|297526075|ref|YP_003668099.1|	-	1.3	9.4	6.9	2.3	8.7	0.2	2.4	1	1	1	2	2	2	0	Inhibitor	of	Apoptosis	domain
C1_2	PF03107.11	gi|297526075|ref|YP_003668099.1|	-	1.5	9.0	8.3	0.28	11.3	0.8	2.4	2	1	0	2	2	2	0	C1	domain
Tnp_zf-ribbon_2	PF13842.1	gi|297526075|ref|YP_003668099.1|	-	1.9	8.9	7.1	22	5.5	4.9	2.6	1	1	0	1	1	1	0	DDE_Tnp_1-like	zinc-ribbon
DUF329	PF03884.9	gi|297526075|ref|YP_003668099.1|	-	1.9	8.0	7.2	10	5.7	0.1	3.0	2	1	0	3	3	3	0	Domain	of	unknown	function	(DUF329)
Zn_Tnp_IS1595	PF12760.2	gi|297526075|ref|YP_003668099.1|	-	2	8.2	11.1	1.2	9.0	0.6	2.9	1	1	1	3	3	3	0	Transposase	zinc-ribbon	domain
zf-nanos	PF05741.8	gi|297526075|ref|YP_003668099.1|	-	2.4	8.1	7.2	6.2	6.8	0.2	3.1	2	1	1	3	3	3	0	Nanos	RNA	binding	domain
Cys_rich_CPXG	PF14255.1	gi|297526075|ref|YP_003668099.1|	-	2.6	7.9	9.9	1.6	8.5	0.4	2.7	2	1	1	3	3	3	0	Cysteine-rich	CPXCG
zf-C2H2_4	PF13894.1	gi|297526075|ref|YP_003668099.1|	-	3.6	8.1	10.0	9.7	6.7	0.4	2.9	3	0	0	3	3	3	0	C2H2-type	zinc	finger
zf-Di19	PF05605.7	gi|297526075|ref|YP_003668099.1|	-	4	7.6	12.4	1.9	8.6	0.6	3.1	2	1	1	3	3	3	0	Drought	induced	19	protein	(Di19),	zinc-binding
TF_Zn_Ribbon	PF08271.7	gi|297526075|ref|YP_003668099.1|	-	4.3	6.7	10.7	1.8	7.9	0.4	2.5	2	1	1	3	3	3	0	TFIIB	zinc-binding
DUF1610	PF07754.6	gi|297526075|ref|YP_003668099.1|	-	4.9	7.3	9.0	11	6.2	1.5	2.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
C1_3	PF07649.7	gi|297526075|ref|YP_003668099.1|	-	7.3	6.7	12.8	15	5.6	0.7	2.9	2	1	0	2	2	2	0	C1-like	domain
A2L_zn_ribbon	PF08792.5	gi|297526075|ref|YP_003668099.1|	-	8.5	5.9	7.1	10	5.7	0.2	2.5	2	1	0	2	2	2	0	A2L	zinc	ribbon	domain
PHP_C	PF13263.1	gi|297526076|ref|YP_003668100.1|	-	2.5e-16	58.9	0.0	4.8e-16	57.9	0.0	1.5	1	0	0	1	1	1	1	PHP-associated
PHP	PF02811.14	gi|297526076|ref|YP_003668100.1|	-	4.6e-14	52.5	0.0	2.3e-13	50.3	0.0	2.1	1	1	1	2	2	2	1	PHP	domain
tRNA-synt_1	PF00133.17	gi|297526077|ref|YP_003668101.1|	-	6.1e-127	424.1	0.0	3.9e-126	421.4	0.0	1.9	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1g	PF09334.6	gi|297526077|ref|YP_003668101.1|	-	5.6e-34	117.4	6.4	7.2e-17	61.1	0.1	4.1	3	1	0	3	3	3	3	tRNA	synthetases	class	I	(M)
Anticodon_1	PF08264.8	gi|297526077|ref|YP_003668101.1|	-	7.4e-29	100.4	5.0	7.4e-29	100.4	3.5	1.6	2	0	0	2	2	2	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1_2	PF13603.1	gi|297526077|ref|YP_003668101.1|	-	7.8e-05	22.0	0.0	0.05	12.8	0.0	2.6	1	1	1	2	2	2	2	Leucyl-tRNA	synthetase,	Domain	2
zf-TFIIB	PF13453.1	gi|297526077|ref|YP_003668101.1|	-	0.083	12.0	2.8	9.8	5.4	0.0	3.5	3	0	0	3	3	3	0	Transcription	factor	zinc-finger
TF_Zn_Ribbon	PF08271.7	gi|297526077|ref|YP_003668101.1|	-	0.11	11.8	2.2	23	4.3	0.1	3.5	3	0	0	3	3	3	0	TFIIB	zinc-binding
Mut7-C	PF01927.11	gi|297526077|ref|YP_003668101.1|	-	0.17	11.8	3.1	13	5.7	0.2	4.0	2	2	0	2	2	2	0	Mut7-C	RNAse	domain
zinc_ribbon_2	PF13240.1	gi|297526077|ref|YP_003668101.1|	-	0.73	9.4	7.1	0.3	10.6	0.9	2.8	3	0	0	3	3	3	0	zinc-ribbon	domain
zf-ISL3	PF14690.1	gi|297526077|ref|YP_003668101.1|	-	1.4	8.9	7.4	5.9	7.0	0.3	3.6	2	1	1	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-ribbon_3	PF13248.1	gi|297526077|ref|YP_003668101.1|	-	1.6	8.0	7.5	0.41	9.9	0.8	2.6	3	0	0	3	3	3	0	zinc-ribbon	domain
DNA_ligase_ZBD	PF03119.11	gi|297526077|ref|YP_003668101.1|	-	3.3	7.4	6.3	0.8	9.4	0.1	3.2	4	0	0	4	4	4	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
DZR	PF12773.2	gi|297526077|ref|YP_003668101.1|	-	4	7.3	5.9	1.1e+02	2.7	0.0	3.2	2	1	0	2	2	2	0	Double	zinc	ribbon
Rubredoxin	PF00301.15	gi|297526077|ref|YP_003668101.1|	-	7.9	6.4	12.6	1.5	8.7	4.4	2.6	2	0	0	2	2	2	0	Rubredoxin
DUF4147	PF13660.1	gi|297526078|ref|YP_003668102.1|	-	9.5e-83	276.9	0.0	1.2e-82	276.6	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4147)
MOFRL	PF05161.8	gi|297526078|ref|YP_003668102.1|	-	8.8e-31	106.2	0.0	1.8e-30	105.1	0.0	1.6	1	0	0	1	1	1	1	MOFRL	family
Coat_F	PF07875.7	gi|297526078|ref|YP_003668102.1|	-	0.12	12.4	0.0	0.29	11.2	0.0	1.6	1	0	0	1	1	1	0	Coat	F	domain
Radical_SAM	PF04055.16	gi|297526080|ref|YP_003668104.1|	-	9.7e-13	48.6	0.5	2.7e-12	47.1	0.1	1.9	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|297526080|ref|YP_003668104.1|	-	2.7e-08	34.0	0.1	7e-08	32.6	0.0	1.7	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|297526080|ref|YP_003668104.1|	-	1.9e-06	27.9	0.1	5.3e-06	26.4	0.0	1.8	2	0	0	2	2	2	1	4Fe-4S	single	cluster	domain
Maf	PF02545.9	gi|297526081|ref|YP_003668105.1|	-	1.1e-49	168.1	0.0	1.5e-49	167.8	0.0	1.1	1	0	0	1	1	1	1	Maf-like	protein
AP_endonuc_2	PF01261.19	gi|297526081|ref|YP_003668105.1|	-	0.028	13.6	0.0	0.04	13.2	0.0	1.2	1	0	0	1	1	1	0	Xylose	isomerase-like	TIM	barrel
ABC_tran	PF00005.22	gi|297526082|ref|YP_003668106.1|	-	3.4e-17	63.0	0.0	1.1e-16	61.4	0.0	1.9	1	1	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297526082|ref|YP_003668106.1|	-	1.1e-08	35.4	0.0	0.00032	20.7	0.0	2.3	2	0	0	2	2	2	2	AAA	domain
Acetyltransf_1	PF00583.19	gi|297526082|ref|YP_003668106.1|	-	1.2e-06	28.4	0.2	3.1e-06	27.1	0.1	1.7	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
AAA_22	PF13401.1	gi|297526082|ref|YP_003668106.1|	-	0.00013	22.1	0.0	0.00028	21.0	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|297526082|ref|YP_003668106.1|	-	0.00016	21.2	1.1	0.38	10.1	0.2	2.2	1	1	1	2	2	2	2	AAA-like	domain
SMC_N	PF02463.14	gi|297526082|ref|YP_003668106.1|	-	0.0002	20.6	0.0	0.011	15.0	0.0	1.8	1	1	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
FtsK_SpoIIIE	PF01580.13	gi|297526082|ref|YP_003668106.1|	-	0.00024	20.6	0.3	0.033	13.6	0.0	2.5	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
Acetyltransf_7	PF13508.1	gi|297526082|ref|YP_003668106.1|	-	0.00027	21.0	0.0	0.00073	19.6	0.0	1.8	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
AAA_25	PF13481.1	gi|297526082|ref|YP_003668106.1|	-	0.0006	19.2	0.3	0.0036	16.7	0.2	2.1	1	1	0	1	1	1	1	AAA	domain
NACHT	PF05729.7	gi|297526082|ref|YP_003668106.1|	-	0.00098	18.8	0.0	0.0021	17.7	0.0	1.6	1	0	0	1	1	1	1	NACHT	domain
AAA_33	PF13671.1	gi|297526082|ref|YP_003668106.1|	-	0.0011	18.8	0.0	0.0024	17.7	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|297526082|ref|YP_003668106.1|	-	0.0016	18.4	0.2	0.0059	16.6	0.1	1.9	1	1	0	1	1	1	1	AAA	ATPase	domain
UPF0079	PF02367.12	gi|297526082|ref|YP_003668106.1|	-	0.004	16.7	0.1	0.011	15.4	0.0	1.7	1	0	0	1	1	1	1	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_19	PF13245.1	gi|297526082|ref|YP_003668106.1|	-	0.011	15.4	0.3	0.22	11.2	0.1	2.7	3	0	0	3	3	3	0	Part	of	AAA	domain
GNAT_acetyltr_2	PF13718.1	gi|297526082|ref|YP_003668106.1|	-	0.011	15.0	0.0	0.019	14.2	0.0	1.3	1	0	0	1	1	1	0	GNAT	acetyltransferase	2
AAA_30	PF13604.1	gi|297526082|ref|YP_003668106.1|	-	0.011	15.2	0.1	0.053	13.0	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
MobB	PF03205.9	gi|297526082|ref|YP_003668106.1|	-	0.011	15.3	0.1	0.032	13.9	0.1	1.8	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Miro	PF08477.8	gi|297526082|ref|YP_003668106.1|	-	0.013	16.0	0.0	0.031	14.7	0.0	1.6	1	0	0	1	1	1	0	Miro-like	protein
AAA_23	PF13476.1	gi|297526082|ref|YP_003668106.1|	-	0.016	15.5	0.0	0.041	14.2	0.0	1.7	2	0	0	2	2	1	0	AAA	domain
DUF258	PF03193.11	gi|297526082|ref|YP_003668106.1|	-	0.017	14.3	0.0	0.03	13.5	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_17	PF13207.1	gi|297526082|ref|YP_003668106.1|	-	0.035	14.9	0.4	0.14	13.0	0.1	2.2	2	0	0	2	2	1	0	AAA	domain
AAA_15	PF13175.1	gi|297526082|ref|YP_003668106.1|	-	0.047	12.7	0.0	7.8	5.4	0.0	2.4	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_29	PF13555.1	gi|297526082|ref|YP_003668106.1|	-	0.078	12.5	0.0	0.18	11.3	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
T2SE	PF00437.15	gi|297526082|ref|YP_003668106.1|	-	0.081	11.8	0.0	0.18	10.6	0.0	1.5	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
cobW	PF02492.14	gi|297526082|ref|YP_003668106.1|	-	0.088	12.2	0.0	0.16	11.3	0.0	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_14	PF13173.1	gi|297526082|ref|YP_003668106.1|	-	0.09	12.6	0.0	1.1	9.1	0.0	2.7	3	0	0	3	3	3	0	AAA	domain
RNA_helicase	PF00910.17	gi|297526082|ref|YP_003668106.1|	-	0.11	12.6	0.0	0.58	10.3	0.0	2.2	2	0	0	2	2	2	0	RNA	helicase
FR47	PF08445.5	gi|297526082|ref|YP_003668106.1|	-	0.11	12.2	0.0	0.3	10.8	0.0	1.8	1	0	0	1	1	1	0	FR47-like	protein
Zeta_toxin	PF06414.7	gi|297526082|ref|YP_003668106.1|	-	0.13	11.3	0.1	0.26	10.3	0.1	1.4	1	0	0	1	1	1	0	Zeta	toxin
Acetyltransf_10	PF13673.1	gi|297526082|ref|YP_003668106.1|	-	0.16	12.1	0.1	0.96	9.5	0.0	2.3	2	0	0	2	2	2	0	Acetyltransferase	(GNAT)	domain
TrwB_AAD_bind	PF10412.4	gi|297526082|ref|YP_003668106.1|	-	0.17	10.4	0.4	0.88	8.1	0.1	1.9	2	0	0	2	2	2	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
Creatininase	PF02633.9	gi|297526083|ref|YP_003668107.1|	-	7.7e-26	90.6	0.0	9.9e-26	90.2	0.0	1.1	1	0	0	1	1	1	1	Creatinine	amidohydrolase
PMBR	PF09373.5	gi|297526083|ref|YP_003668107.1|	-	0.012	15.5	0.0	0.042	13.8	0.0	2.0	1	0	0	1	1	1	0	Pseudomurein-binding	repeat
DUF1886	PF09171.5	gi|297526084|ref|YP_003668108.1|	-	1e-77	260.5	0.4	1.2e-77	260.3	0.3	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1886)
DUF3826	PF12875.2	gi|297526084|ref|YP_003668108.1|	-	0.058	13.0	0.2	0.091	12.4	0.2	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3826)
Nitro_FeMo-Co	PF02579.12	gi|297526085|ref|YP_003668109.1|	-	2.4e-05	24.2	0.0	3.4e-05	23.8	0.0	1.1	1	0	0	1	1	1	1	Dinitrogenase	iron-molybdenum	cofactor
DUF1892	PF08987.5	gi|297526085|ref|YP_003668109.1|	-	0.0067	16.4	0.8	0.0075	16.2	0.5	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1892)
Response_reg	PF00072.19	gi|297526085|ref|YP_003668109.1|	-	0.023	14.6	0.0	0.026	14.5	0.0	1.2	1	0	0	1	1	1	0	Response	regulator	receiver	domain
DEDD_Tnp_IS110	PF01548.12	gi|297526085|ref|YP_003668109.1|	-	0.069	12.8	0.0	0.082	12.5	0.0	1.1	1	0	0	1	1	1	0	Transposase
PCAF_N	PF06466.6	gi|297526086|ref|YP_003668110.1|	-	0.065	12.5	1.0	0.073	12.3	0.7	1.1	1	0	0	1	1	1	0	PCAF	(P300/CBP-associated	factor)	N-terminal	domain
Pox_A3L	PF05288.6	gi|297526086|ref|YP_003668110.1|	-	0.17	11.6	3.3	0.093	12.4	0.5	1.8	2	0	0	2	2	2	0	Poxvirus	A3L	Protein
DUF2283	PF10049.4	gi|297526087|ref|YP_003668111.1|	-	1.3e-05	24.9	0.8	1.9e-05	24.4	0.6	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2283)
HUN	PF08729.5	gi|297526087|ref|YP_003668111.1|	-	0.35	10.7	3.4	5.4	6.9	0.2	2.2	1	1	1	2	2	2	0	HPC2	and	ubinuclein	domain
UPF0236	PF06782.6	gi|297526088|ref|YP_003668112.1|	-	0.062	11.7	0.5	0.091	11.1	0.2	1.3	1	1	0	1	1	1	0	Uncharacterised	protein	family	(UPF0236)
DEAD_2	PF06733.10	gi|297526088|ref|YP_003668112.1|	-	0.16	11.3	1.0	0.25	10.7	0.2	1.6	1	1	1	2	2	2	0	DEAD_2
Methyltransf_11	PF08241.7	gi|297526089|ref|YP_003668113.1|	-	4.8e-18	65.4	0.0	7.1e-18	64.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|297526089|ref|YP_003668113.1|	-	3e-11	43.2	0.0	3.8e-11	42.9	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|297526089|ref|YP_003668113.1|	-	3.2e-10	39.7	0.0	6.7e-10	38.7	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|297526089|ref|YP_003668113.1|	-	1.9e-09	36.9	0.0	2.9e-09	36.4	0.0	1.3	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_12	PF08242.7	gi|297526089|ref|YP_003668113.1|	-	3.1e-08	33.9	0.0	5.3e-08	33.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|297526089|ref|YP_003668113.1|	-	7.7e-07	29.6	0.0	3.7e-06	27.4	0.0	1.9	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|297526089|ref|YP_003668113.1|	-	1.7e-05	25.0	0.0	2.8e-05	24.3	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
MetW	PF07021.7	gi|297526089|ref|YP_003668113.1|	-	0.00018	20.9	0.0	0.00025	20.4	0.0	1.1	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
Methyltransf_9	PF08003.6	gi|297526089|ref|YP_003668113.1|	-	0.0013	17.4	0.1	0.0025	16.5	0.0	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF1698)
DREV	PF05219.7	gi|297526089|ref|YP_003668113.1|	-	0.01	14.7	0.0	0.014	14.3	0.0	1.1	1	0	0	1	1	1	0	DREV	methyltransferase
Nol1_Nop2_Fmu	PF01189.12	gi|297526090|ref|YP_003668114.1|	-	3.6e-34	118.4	0.0	3.3e-33	115.2	0.0	2.0	2	0	0	2	2	2	1	NOL1/NOP2/sun	family
PUA	PF01472.15	gi|297526090|ref|YP_003668114.1|	-	1.4e-12	47.1	0.3	2.9e-12	46.1	0.2	1.6	1	0	0	1	1	1	1	PUA	domain
Cons_hypoth95	PF03602.10	gi|297526090|ref|YP_003668114.1|	-	0.0043	16.4	0.0	0.0087	15.4	0.0	1.4	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
zf-ribbon_3	PF13248.1	gi|297526091|ref|YP_003668115.1|	-	9.8e-05	21.4	3.0	0.00016	20.7	2.1	1.4	1	0	0	1	1	1	1	zinc-ribbon	domain
DNA_ligase_ZBD	PF03119.11	gi|297526091|ref|YP_003668115.1|	-	0.00037	20.1	4.3	0.0077	15.9	0.1	2.4	2	0	0	2	2	2	1	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
DZR	PF12773.2	gi|297526091|ref|YP_003668115.1|	-	0.00087	19.0	0.1	0.0015	18.3	0.1	1.4	1	0	0	1	1	1	1	Double	zinc	ribbon
NOB1_Zn_bind	PF08772.6	gi|297526091|ref|YP_003668115.1|	-	0.0072	16.1	0.3	0.017	14.9	0.2	1.7	1	0	0	1	1	1	1	Nin	one	binding	(NOB1)	Zn-ribbon	like
RecR	PF02132.10	gi|297526091|ref|YP_003668115.1|	-	0.0075	15.6	0.7	0.026	13.9	0.1	2.1	2	0	0	2	2	2	1	RecR	protein
zf-C4_Topoisom	PF01396.14	gi|297526091|ref|YP_003668115.1|	-	0.016	14.7	2.5	0.044	13.2	0.3	2.2	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
Auto_anti-p27	PF06677.7	gi|297526091|ref|YP_003668115.1|	-	0.047	13.4	2.2	2.9	7.7	0.1	2.4	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
Cys_rich_CPCC	PF14206.1	gi|297526091|ref|YP_003668115.1|	-	0.059	12.9	2.5	0.14	11.6	1.7	1.7	1	0	0	1	1	1	0	Cysteine-rich	CPCC
Cript	PF10235.4	gi|297526091|ref|YP_003668115.1|	-	0.086	13.1	1.1	0.17	12.2	0.3	1.8	2	0	0	2	2	2	0	Microtubule-associated	protein	CRIPT
Lar_restr_allev	PF14354.1	gi|297526091|ref|YP_003668115.1|	-	0.18	12.0	2.2	8.1	6.8	0.1	2.3	1	1	1	2	2	2	0	Restriction	alleviation	protein	Lar
Nudix_N_2	PF14803.1	gi|297526091|ref|YP_003668115.1|	-	0.21	11.3	2.6	4.9	6.9	0.2	2.4	2	0	0	2	2	2	0	Nudix	N-terminal
OrfB_Zn_ribbon	PF07282.6	gi|297526091|ref|YP_003668115.1|	-	0.28	10.8	1.8	6	6.6	1.3	2.5	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
Rad50_zn_hook	PF04423.9	gi|297526091|ref|YP_003668115.1|	-	0.29	10.6	3.9	1.7	8.1	0.1	2.8	2	0	0	2	2	2	0	Rad50	zinc	hook	motif
zinc_ribbon_2	PF13240.1	gi|297526091|ref|YP_003668115.1|	-	0.35	10.4	4.1	1.3	8.6	2.9	1.9	1	1	1	2	2	2	0	zinc-ribbon	domain
Zn-ribbon_8	PF09723.5	gi|297526091|ref|YP_003668115.1|	-	0.56	10.1	3.8	6	6.9	2.6	2.2	1	1	1	2	2	2	0	Zinc	ribbon	domain
zf-ISL3	PF14690.1	gi|297526091|ref|YP_003668115.1|	-	0.7	9.9	6.7	1.5	8.8	0.1	2.7	3	0	0	3	3	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
TF_Zn_Ribbon	PF08271.7	gi|297526091|ref|YP_003668115.1|	-	0.79	9.0	6.1	6.6	6.1	0.4	2.5	1	1	1	2	2	2	0	TFIIB	zinc-binding
Prim_Zn_Ribbon	PF08273.7	gi|297526091|ref|YP_003668115.1|	-	1.3	9.1	3.7	25	5.0	0.2	2.3	2	0	0	2	2	2	0	Zinc-binding	domain	of	primase-helicase
FdhE	PF04216.7	gi|297526091|ref|YP_003668115.1|	-	1.4	8.5	4.0	17	4.9	0.5	2.2	1	1	1	2	2	2	0	Protein	involved	in	formate	dehydrogenase	formation
UPF0547	PF10571.4	gi|297526091|ref|YP_003668115.1|	-	2	8.2	5.3	12	5.6	0.8	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
Cys_rich_KTR	PF14205.1	gi|297526091|ref|YP_003668115.1|	-	9.2	5.8	6.6	17	4.9	0.4	2.8	3	0	0	3	3	3	0	Cysteine-rich	KTR
NAD_kinase	PF01513.16	gi|297526092|ref|YP_003668116.1|	-	2.2e-30	105.4	0.1	2.5e-30	105.2	0.1	1.0	1	0	0	1	1	1	1	ATP-NAD	kinase
DAGK_cat	PF00781.19	gi|297526092|ref|YP_003668116.1|	-	0.037	13.4	0.0	0.06	12.7	0.0	1.4	1	0	0	1	1	1	0	Diacylglycerol	kinase	catalytic	domain
Glyco_hydro_42M	PF08532.5	gi|297526092|ref|YP_003668116.1|	-	0.055	12.6	0.0	0.11	11.6	0.0	1.4	1	0	0	1	1	1	0	Beta-galactosidase	trimerisation	domain
Met_10	PF02475.11	gi|297526093|ref|YP_003668117.1|	-	1.2e-39	136.0	0.2	1.8e-39	135.4	0.1	1.3	1	0	0	1	1	1	1	Met-10+	like-protein
tRNA_U5-meth_tr	PF05958.6	gi|297526093|ref|YP_003668117.1|	-	0.0022	16.7	0.2	0.0046	15.6	0.0	1.6	2	0	0	2	2	2	1	tRNA	(Uracil-5-)-methyltransferase
Methyltransf_26	PF13659.1	gi|297526093|ref|YP_003668117.1|	-	0.0024	17.9	0.0	0.0045	17.0	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
DNA_methylase	PF00145.12	gi|297526093|ref|YP_003668117.1|	-	0.0051	15.9	0.0	0.0079	15.3	0.0	1.3	1	0	0	1	1	1	1	C-5	cytosine-specific	DNA	methylase
Methyltransf_15	PF09445.5	gi|297526093|ref|YP_003668117.1|	-	0.017	14.7	0.1	0.034	13.7	0.0	1.6	2	0	0	2	2	2	0	RNA	cap	guanine-N2	methyltransferase
Cons_hypoth95	PF03602.10	gi|297526093|ref|YP_003668117.1|	-	0.049	13.0	0.0	0.13	11.6	0.0	1.7	2	0	0	2	2	2	0	Conserved	hypothetical	protein	95
TRM	PF02005.11	gi|297526093|ref|YP_003668117.1|	-	0.056	12.3	0.0	0.063	12.1	0.0	1.2	1	0	0	1	1	1	0	N2,N2-dimethylguanosine	tRNA	methyltransferase
PrmA	PF06325.8	gi|297526093|ref|YP_003668117.1|	-	0.062	12.4	0.0	0.092	11.8	0.0	1.2	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_18	PF12847.2	gi|297526093|ref|YP_003668117.1|	-	0.087	13.4	0.0	0.21	12.1	0.0	1.7	2	0	0	2	2	2	0	Methyltransferase	domain
DUF371	PF04027.8	gi|297526094|ref|YP_003668118.1|	-	2.8e-47	159.6	0.4	3.3e-47	159.4	0.3	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF371)
PCMT	PF01135.14	gi|297526095|ref|YP_003668119.1|	-	9.2e-70	234.4	0.0	1.1e-69	234.1	0.0	1.0	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_31	PF13847.1	gi|297526095|ref|YP_003668119.1|	-	1.8e-09	37.3	0.0	2.5e-09	36.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|297526095|ref|YP_003668119.1|	-	8.8e-08	32.7	0.0	1.3e-07	32.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|297526095|ref|YP_003668119.1|	-	1.3e-06	28.4	0.0	1.8e-06	27.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
GCD14	PF08704.5	gi|297526095|ref|YP_003668119.1|	-	3.3e-06	26.7	0.0	4.5e-06	26.3	0.0	1.1	1	0	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
Methyltransf_24	PF13578.1	gi|297526095|ref|YP_003668119.1|	-	9.7e-05	23.1	0.0	0.00015	22.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_3	PF01596.12	gi|297526095|ref|YP_003668119.1|	-	0.0017	17.4	0.0	0.0024	16.9	0.0	1.2	1	0	0	1	1	1	1	O-methyltransferase
MTS	PF05175.9	gi|297526095|ref|YP_003668119.1|	-	0.0021	17.4	0.0	0.0032	16.8	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_28	PF02636.12	gi|297526095|ref|YP_003668119.1|	-	0.0047	16.3	0.0	0.0058	16.0	0.0	1.1	1	0	0	1	1	1	1	Putative	S-adenosyl-L-methionine-dependent	methyltransferase
Methyltransf_32	PF13679.1	gi|297526095|ref|YP_003668119.1|	-	0.0072	16.0	0.0	0.0097	15.5	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|297526095|ref|YP_003668119.1|	-	0.0082	15.1	0.0	0.0097	14.9	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
Met_10	PF02475.11	gi|297526095|ref|YP_003668119.1|	-	0.01	15.4	0.0	0.019	14.5	0.0	1.4	1	0	0	1	1	1	0	Met-10+	like-protein
Methyltransf_25	PF13649.1	gi|297526095|ref|YP_003668119.1|	-	0.012	15.9	0.0	0.018	15.4	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|297526095|ref|YP_003668119.1|	-	0.023	15.1	0.0	0.037	14.5	0.0	1.4	1	0	0	1	1	1	0	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|297526095|ref|YP_003668119.1|	-	0.16	11.6	0.0	0.31	10.7	0.0	1.6	1	1	0	1	1	1	0	Methyltransferase	domain
XPG_I	PF00867.13	gi|297526096|ref|YP_003668120.1|	-	4e-25	87.6	0.0	7.3e-25	86.8	0.0	1.4	1	0	0	1	1	1	1	XPG	I-region
XPG_N	PF00752.12	gi|297526096|ref|YP_003668120.1|	-	2.4e-22	79.1	0.0	4.5e-22	78.2	0.0	1.5	1	0	0	1	1	1	1	XPG	N-terminal	domain
5_3_exonuc	PF01367.15	gi|297526096|ref|YP_003668120.1|	-	6.7e-07	29.4	0.3	1.9e-06	28.0	0.0	1.9	2	0	0	2	2	2	1	5'-3'	exonuclease,	C-terminal	SAM	fold
HHH_5	PF14520.1	gi|297526096|ref|YP_003668120.1|	-	0.00012	22.1	0.1	0.0008	19.5	0.0	2.4	2	0	0	2	2	2	1	Helix-hairpin-helix	domain
5_3_exonuc_N	PF02739.11	gi|297526096|ref|YP_003668120.1|	-	0.016	14.6	0.2	0.13	11.6	0.0	2.3	2	1	0	2	2	2	0	5'-3'	exonuclease,	N-terminal	resolvase-like	domain
HHH_2	PF12826.2	gi|297526096|ref|YP_003668120.1|	-	0.024	14.4	0.0	0.092	12.6	0.0	1.9	2	0	0	2	2	2	0	Helix-hairpin-helix	motif
HTH_20	PF12840.2	gi|297526097|ref|YP_003668121.1|	-	0.0011	18.7	0.0	0.0013	18.5	0.0	1.1	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|297526097|ref|YP_003668121.1|	-	0.074	12.7	0.2	0.11	12.2	0.1	1.4	1	1	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
PadR	PF03551.9	gi|297526097|ref|YP_003668121.1|	-	0.086	12.6	0.3	0.11	12.2	0.2	1.2	1	0	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
HTH_32	PF13565.1	gi|297526097|ref|YP_003668121.1|	-	0.12	13.1	0.0	0.18	12.6	0.0	1.3	1	0	0	1	1	1	0	Homeodomain-like	domain
AAA	PF00004.24	gi|297526098|ref|YP_003668122.1|	-	4e-100	331.1	0.0	6.2e-50	168.8	0.0	2.3	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
CDC48_N	PF02359.13	gi|297526098|ref|YP_003668122.1|	-	3.3e-25	87.8	0.1	2.5e-24	85.0	0.4	2.3	2	0	0	2	2	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
RuvB_N	PF05496.7	gi|297526098|ref|YP_003668122.1|	-	1.5e-15	56.9	0.0	2.6e-07	29.9	0.0	2.8	2	1	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_16	PF13191.1	gi|297526098|ref|YP_003668122.1|	-	1.9e-14	54.1	0.0	1.9e-06	28.0	0.0	2.8	2	1	0	2	2	2	2	AAA	ATPase	domain
AAA_22	PF13401.1	gi|297526098|ref|YP_003668122.1|	-	1e-13	51.5	0.7	1e-05	25.7	0.1	4.2	2	2	0	3	3	3	2	AAA	domain
CDC48_2	PF02933.12	gi|297526098|ref|YP_003668122.1|	-	1.1e-13	50.5	1.2	2.9e-13	49.2	0.3	2.2	2	0	0	2	2	1	1	Cell	division	protein	48	(CDC48),	domain	2
AAA_2	PF07724.9	gi|297526098|ref|YP_003668122.1|	-	2.9e-12	46.8	0.0	2.8e-06	27.3	0.0	2.7	2	0	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
AAA_17	PF13207.1	gi|297526098|ref|YP_003668122.1|	-	3e-12	47.4	0.0	2.3e-05	25.2	0.0	3.1	2	0	0	2	2	2	2	AAA	domain
AAA_5	PF07728.9	gi|297526098|ref|YP_003668122.1|	-	1.7e-11	43.9	2.3	9.5e-05	22.1	0.0	4.1	2	2	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
AAA_33	PF13671.1	gi|297526098|ref|YP_003668122.1|	-	4.8e-11	42.7	0.0	0.00022	21.0	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
TIP49	PF06068.8	gi|297526098|ref|YP_003668122.1|	-	6.7e-11	41.5	0.0	8.2e-05	21.4	0.0	2.6	2	0	0	2	2	2	2	TIP49	C-terminus
AAA_14	PF13173.1	gi|297526098|ref|YP_003668122.1|	-	1.8e-10	40.8	0.0	8.5e-05	22.4	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
IstB_IS21	PF01695.12	gi|297526098|ref|YP_003668122.1|	-	3.3e-09	36.4	0.1	0.0022	17.4	0.0	2.6	3	0	0	3	3	2	2	IstB-like	ATP	binding	protein
AAA_19	PF13245.1	gi|297526098|ref|YP_003668122.1|	-	1.2e-08	34.5	1.4	0.0044	16.7	0.0	2.9	2	0	0	2	2	2	2	Part	of	AAA	domain
Zeta_toxin	PF06414.7	gi|297526098|ref|YP_003668122.1|	-	2.1e-08	33.4	0.0	0.0015	17.6	0.0	2.5	2	0	0	2	2	2	2	Zeta	toxin
AAA_18	PF13238.1	gi|297526098|ref|YP_003668122.1|	-	6.6e-08	32.9	0.1	0.013	15.8	0.0	3.1	3	0	0	3	3	2	2	AAA	domain
Sigma54_activat	PF00158.21	gi|297526098|ref|YP_003668122.1|	-	1.7e-07	30.9	0.1	0.019	14.4	0.0	3.8	3	1	0	3	3	3	2	Sigma-54	interaction	domain
AAA_28	PF13521.1	gi|297526098|ref|YP_003668122.1|	-	2.4e-07	30.8	0.0	0.029	14.3	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
RNA_helicase	PF00910.17	gi|297526098|ref|YP_003668122.1|	-	4.5e-07	30.0	0.0	0.035	14.2	0.0	2.7	2	0	0	2	2	2	2	RNA	helicase
Arch_ATPase	PF01637.13	gi|297526098|ref|YP_003668122.1|	-	5.3e-07	29.5	0.7	0.0047	16.6	0.0	3.8	2	2	1	3	3	3	1	Archaeal	ATPase
Mg_chelatase	PF01078.16	gi|297526098|ref|YP_003668122.1|	-	5.4e-07	28.9	0.6	0.031	13.4	0.0	2.4	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_24	PF13479.1	gi|297526098|ref|YP_003668122.1|	-	6.5e-07	29.1	0.1	0.024	14.2	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
KaiC	PF06745.8	gi|297526098|ref|YP_003668122.1|	-	2.9e-06	26.5	0.9	0.15	11.1	0.0	3.6	2	1	1	3	3	3	2	KaiC
Sigma54_activ_2	PF14532.1	gi|297526098|ref|YP_003668122.1|	-	3.4e-06	27.1	0.0	0.14	12.2	0.0	2.5	2	0	0	2	2	2	2	Sigma-54	interaction	domain
NACHT	PF05729.7	gi|297526098|ref|YP_003668122.1|	-	1.2e-05	24.9	0.2	0.61	9.7	0.0	3.6	4	0	0	4	4	3	2	NACHT	domain
DUF815	PF05673.8	gi|297526098|ref|YP_003668122.1|	-	1.9e-05	23.7	0.0	0.13	11.1	0.0	2.6	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
PhoH	PF02562.11	gi|297526098|ref|YP_003668122.1|	-	2e-05	23.9	0.9	0.25	10.5	0.0	3.1	3	0	0	3	3	3	2	PhoH-like	protein
AAA_25	PF13481.1	gi|297526098|ref|YP_003668122.1|	-	3.5e-05	23.2	8.4	0.26	10.6	0.3	3.9	2	2	0	3	3	3	2	AAA	domain
AAA_3	PF07726.6	gi|297526098|ref|YP_003668122.1|	-	4.1e-05	23.1	0.0	0.32	10.6	0.0	2.8	2	1	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
Parvo_NS1	PF01057.12	gi|297526098|ref|YP_003668122.1|	-	4.4e-05	22.4	0.2	0.19	10.5	0.0	2.3	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
ABC_tran	PF00005.22	gi|297526098|ref|YP_003668122.1|	-	0.00026	21.2	0.0	1.1	9.6	0.0	2.4	2	0	0	2	2	2	2	ABC	transporter
NB-ARC	PF00931.17	gi|297526098|ref|YP_003668122.1|	-	0.00028	19.8	0.0	0.31	9.8	0.0	2.3	2	0	0	2	2	2	2	NB-ARC	domain
Bac_DnaA	PF00308.13	gi|297526098|ref|YP_003668122.1|	-	0.00033	20.3	0.0	0.22	11.1	0.0	3.0	3	0	0	3	3	3	1	Bacterial	dnaA	protein
DUF2075	PF09848.4	gi|297526098|ref|YP_003668122.1|	-	0.00036	19.6	0.0	0.37	9.7	0.0	2.3	2	0	0	2	2	2	2	Uncharacterized	conserved	protein	(DUF2075)
UPF0079	PF02367.12	gi|297526098|ref|YP_003668122.1|	-	0.0012	18.4	0.1	2.8	7.5	0.0	3.2	4	0	0	4	4	2	0	Uncharacterised	P-loop	hydrolase	UPF0079
SKI	PF01202.17	gi|297526098|ref|YP_003668122.1|	-	0.0014	18.5	0.1	2.2	8.1	0.0	3.1	3	0	0	3	3	3	1	Shikimate	kinase
NTPase_1	PF03266.10	gi|297526098|ref|YP_003668122.1|	-	0.0021	17.8	3.4	2.6	7.7	0.0	4.2	3	2	1	4	4	4	1	NTPase
AAA_30	PF13604.1	gi|297526098|ref|YP_003668122.1|	-	0.0031	17.1	0.0	2	7.9	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
AAA_11	PF13086.1	gi|297526098|ref|YP_003668122.1|	-	0.0037	16.8	0.0	2.7	7.4	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
T2SE	PF00437.15	gi|297526098|ref|YP_003668122.1|	-	0.0054	15.6	0.0	1.8	7.3	0.0	2.5	2	1	0	2	2	2	1	Type	II/IV	secretion	system	protein
ResIII	PF04851.10	gi|297526098|ref|YP_003668122.1|	-	0.006	16.4	0.0	3.9	7.2	0.0	2.4	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
AFG1_ATPase	PF03969.11	gi|297526098|ref|YP_003668122.1|	-	0.0076	15.0	0.2	3.1	6.5	0.0	2.5	2	1	0	2	2	2	0	AFG1-like	ATPase
IPT	PF01745.11	gi|297526098|ref|YP_003668122.1|	-	0.015	14.4	0.2	2.1	7.4	0.0	2.5	2	0	0	2	2	2	0	Isopentenyl	transferase
Vps4_C	PF09336.5	gi|297526098|ref|YP_003668122.1|	-	0.015	15.1	0.0	0.11	12.4	0.0	2.6	2	0	0	2	2	1	0	Vps4	C	terminal	oligomerisation	domain
ATP-synt_ab	PF00006.20	gi|297526098|ref|YP_003668122.1|	-	0.016	14.7	0.0	3.9	6.9	0.0	2.3	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
KAP_NTPase	PF07693.9	gi|297526098|ref|YP_003668122.1|	-	0.05	12.5	0.0	11	4.8	0.0	3.1	2	1	1	3	3	3	0	KAP	family	P-loop	domain
cobW	PF02492.14	gi|297526098|ref|YP_003668122.1|	-	0.055	12.9	0.1	8.3	5.8	0.0	2.5	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
DAP3	PF10236.4	gi|297526098|ref|YP_003668122.1|	-	0.082	11.8	0.0	12	4.7	0.0	2.4	2	0	0	2	2	2	0	Mitochondrial	ribosomal	death-associated	protein	3
AAA_10	PF12846.2	gi|297526098|ref|YP_003668122.1|	-	0.15	11.5	1.8	23	4.2	0.2	3.5	2	2	0	3	3	3	0	AAA-like	domain
KTI12	PF08433.5	gi|297526098|ref|YP_003668122.1|	-	0.15	11.2	0.0	9.4	5.3	0.0	2.5	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
Viral_helicase1	PF01443.13	gi|297526098|ref|YP_003668122.1|	-	0.16	11.4	0.0	7.5	6.0	0.0	2.2	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
AAA_21	PF13304.1	gi|297526098|ref|YP_003668122.1|	-	0.21	11.5	2.6	16	5.3	0.3	3.4	2	2	1	3	3	2	0	AAA	domain
Zot	PF05707.7	gi|297526098|ref|YP_003668122.1|	-	0.34	10.3	1.1	37	3.6	0.1	3.6	2	2	0	2	2	2	0	Zonular	occludens	toxin	(Zot)
AAA_23	PF13476.1	gi|297526098|ref|YP_003668122.1|	-	0.44	10.8	1.5	39	4.4	0.0	2.9	4	0	0	4	4	2	0	AAA	domain
EF1_GNE	PF00736.14	gi|297526099|ref|YP_003668123.1|	-	7.3e-22	76.8	0.1	7.8e-22	76.7	0.1	1.0	1	0	0	1	1	1	1	EF-1	guanine	nucleotide	exchange	domain
DUF1610	PF07754.6	gi|297526100|ref|YP_003668124.1|	-	3.7e-16	58.8	18.8	2.3e-08	33.9	5.0	2.2	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF1610)
DZR	PF12773.2	gi|297526100|ref|YP_003668124.1|	-	0.00095	18.9	11.9	0.024	14.4	8.3	2.6	1	1	1	2	2	2	2	Double	zinc	ribbon
OrfB_Zn_ribbon	PF07282.6	gi|297526100|ref|YP_003668124.1|	-	0.0028	17.2	9.6	0.0067	16.0	1.3	2.3	1	1	1	2	2	2	1	Putative	transposase	DNA-binding	domain
DUF1272	PF06906.6	gi|297526100|ref|YP_003668124.1|	-	0.01	15.6	10.0	0.32	10.8	1.4	3.0	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF1272)
zf-ribbon_3	PF13248.1	gi|297526100|ref|YP_003668124.1|	-	0.014	14.5	18.8	0.57	9.4	2.8	3.6	2	1	2	4	4	4	0	zinc-ribbon	domain
PolC_DP2	PF03833.8	gi|297526100|ref|YP_003668124.1|	-	0.019	12.6	3.8	0.02	12.5	2.7	1.1	1	0	0	1	1	1	0	DNA	polymerase	II	large	subunit	DP2
A2L_zn_ribbon	PF08792.5	gi|297526100|ref|YP_003668124.1|	-	0.03	13.7	11.4	1.8	8.0	0.1	3.9	4	0	0	4	4	4	0	A2L	zinc	ribbon	domain
IBR	PF01485.16	gi|297526100|ref|YP_003668124.1|	-	0.07	13.0	7.9	0.47	10.3	5.5	2.0	1	1	0	1	1	1	0	IBR	domain
Tnp_zf-ribbon_2	PF13842.1	gi|297526100|ref|YP_003668124.1|	-	0.092	13.1	10.3	28	5.2	7.2	2.3	1	1	0	1	1	1	0	DDE_Tnp_1-like	zinc-ribbon
DUF2296	PF10058.4	gi|297526100|ref|YP_003668124.1|	-	0.14	11.9	15.0	1.3	8.8	1.9	3.7	2	2	0	2	2	2	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
TF_Zn_Ribbon	PF08271.7	gi|297526100|ref|YP_003668124.1|	-	0.2	11.0	16.7	0.086	12.1	1.9	3.2	3	1	0	3	3	3	0	TFIIB	zinc-binding
Ribosomal_L32p	PF01783.18	gi|297526100|ref|YP_003668124.1|	-	0.21	11.7	13.3	0.51	10.5	1.6	2.9	1	1	1	2	2	2	0	Ribosomal	L32p	protein	family
DUF4503	PF14951.1	gi|297526100|ref|YP_003668124.1|	-	0.23	9.5	2.1	0.24	9.4	1.4	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4503)
NOB1_Zn_bind	PF08772.6	gi|297526100|ref|YP_003668124.1|	-	0.38	10.6	10.0	0.23	11.2	3.1	2.2	1	1	1	2	2	2	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
zinc_ribbon_4	PF13717.1	gi|297526100|ref|YP_003668124.1|	-	0.4	10.4	16.2	2.9	7.6	1.9	4.1	3	1	0	3	3	3	0	zinc-ribbon	domain
zf-CHY	PF05495.7	gi|297526100|ref|YP_003668124.1|	-	0.44	10.7	7.7	0.73	10.0	5.3	1.5	1	1	0	1	1	1	0	CHY	zinc	finger
UPF0547	PF10571.4	gi|297526100|ref|YP_003668124.1|	-	0.51	10.0	19.5	0.099	12.3	7.7	3.1	2	1	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
HypA	PF01155.14	gi|297526100|ref|YP_003668124.1|	-	0.62	9.7	8.0	9.2	5.9	5.5	2.1	1	1	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zinc_ribbon_5	PF13719.1	gi|297526100|ref|YP_003668124.1|	-	0.64	9.6	16.3	3.8	7.1	1.9	4.0	3	1	0	3	3	3	0	zinc-ribbon	domain
zf-AN1	PF01428.11	gi|297526100|ref|YP_003668124.1|	-	0.69	9.8	12.2	1.2	9.0	1.6	2.9	2	1	1	3	3	3	0	AN1-like	Zinc	finger
zf-B_box	PF00643.19	gi|297526100|ref|YP_003668124.1|	-	0.83	9.6	14.2	0.13	12.2	3.4	2.5	1	1	1	2	2	2	0	B-box	zinc	finger
zf-RING_3	PF14369.1	gi|297526100|ref|YP_003668124.1|	-	0.89	9.6	14.4	0.6	10.1	3.6	2.8	1	1	2	3	3	3	0	zinc-finger
Acetone_carb_G	PF08882.6	gi|297526100|ref|YP_003668124.1|	-	1	9.3	3.6	2.8	7.9	0.1	2.1	1	1	1	2	2	2	0	Acetone	carboxylase	gamma	subunit
zf-UBP	PF02148.14	gi|297526100|ref|YP_003668124.1|	-	1.1	9.3	5.7	3.6	7.7	0.5	2.2	2	0	0	2	2	2	0	Zn-finger	in	ubiquitin-hydrolases	and	other	protein
FYVE_2	PF02318.11	gi|297526100|ref|YP_003668124.1|	-	1.4	8.8	5.4	3.2	7.6	3.7	1.6	1	1	0	1	1	1	0	FYVE-type	zinc	finger
Spt4	PF06093.8	gi|297526100|ref|YP_003668124.1|	-	1.5	8.7	9.9	0.54	10.1	0.4	2.2	1	1	1	2	2	2	0	Spt4/RpoE2	zinc	finger
zf-MYND	PF01753.13	gi|297526100|ref|YP_003668124.1|	-	1.5	8.7	10.8	53	3.8	0.1	2.5	1	1	1	2	2	2	0	MYND	finger
zf-RING_5	PF14634.1	gi|297526100|ref|YP_003668124.1|	-	1.5	8.5	12.5	2.9	7.7	8.7	1.6	1	1	0	1	1	1	0	zinc-RING	finger	domain
ADK_lid	PF05191.9	gi|297526100|ref|YP_003668124.1|	-	1.6	8.4	12.4	5.4	6.7	0.1	3.8	3	1	0	4	4	4	0	Adenylate	kinase,	active	site	lid
zf-Mss51	PF13824.1	gi|297526100|ref|YP_003668124.1|	-	2	8.3	11.2	3.4	7.6	1.3	2.3	2	0	0	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
Rubredoxin	PF00301.15	gi|297526100|ref|YP_003668124.1|	-	2.5	8.0	13.0	5.1	7.0	1.1	3.3	2	2	0	2	2	2	0	Rubredoxin
PHD	PF00628.24	gi|297526100|ref|YP_003668124.1|	-	2.7	7.7	10.3	6.7	6.4	7.2	2.0	1	1	0	1	1	1	0	PHD-finger
Rpr2	PF04032.11	gi|297526100|ref|YP_003668124.1|	-	3.1	7.7	9.1	0.28	11.0	3.0	1.8	1	1	0	1	1	1	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
Nudix_N_2	PF14803.1	gi|297526100|ref|YP_003668124.1|	-	3.3	7.4	16.6	4.5	7.0	0.2	3.7	2	1	1	4	4	4	0	Nudix	N-terminal
Zn_ribbon_recom	PF13408.1	gi|297526100|ref|YP_003668124.1|	-	3.5	7.9	7.6	0.57	10.4	2.5	1.7	2	0	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
DUF35_N	PF12172.3	gi|297526100|ref|YP_003668124.1|	-	3.7	7.5	18.0	1.5	8.7	3.1	3.6	2	1	1	3	3	3	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zinc-ribbons_6	PF07191.7	gi|297526100|ref|YP_003668124.1|	-	5.7	6.7	8.9	45	3.9	6.2	2.2	1	1	0	1	1	1	0	zinc-ribbons
zf-C2H2_6	PF13912.1	gi|297526100|ref|YP_003668124.1|	-	5.8	6.9	11.2	34	4.5	0.1	3.9	4	0	0	4	4	4	0	C2H2-type	zinc	finger
zf-C3HC4_4	PF15227.1	gi|297526100|ref|YP_003668124.1|	-	6.6	6.6	10.6	0.25	11.2	0.8	2.3	2	1	0	2	2	2	0	zinc	finger	of	C3HC4-type,	RING
zf-HIT	PF04438.11	gi|297526100|ref|YP_003668124.1|	-	7.5	6.2	15.3	11	5.7	4.4	3.3	3	1	0	3	3	3	0	HIT	zinc	finger
DUF164	PF02591.10	gi|297526100|ref|YP_003668124.1|	-	7.8	6.4	16.1	1.2	9.0	2.2	3.5	1	1	1	2	2	2	0	Putative	zinc	ribbon	domain
Zn-ribbon_8	PF09723.5	gi|297526100|ref|YP_003668124.1|	-	7.9	6.5	17.7	16	5.5	2.1	3.9	1	1	2	3	3	3	0	Zinc	ribbon	domain
TerY-C	PF15616.1	gi|297526100|ref|YP_003668124.1|	-	10	6.0	10.3	2.4	8.1	2.7	2.1	1	1	1	2	2	2	0	TerY-C	metal	binding	domain
PTH2	PF01981.11	gi|297526101|ref|YP_003668125.1|	-	4.6e-42	142.3	0.1	5.2e-42	142.2	0.1	1.0	1	0	0	1	1	1	1	Peptidyl-tRNA	hydrolase	PTH2
TruD	PF01142.13	gi|297526102|ref|YP_003668126.1|	-	3.1e-47	161.0	0.0	3.9e-43	147.5	0.0	2.0	1	1	1	2	2	2	2	tRNA	pseudouridine	synthase	D	(TruD)
KH_5	PF13184.1	gi|297526103|ref|YP_003668127.1|	-	7.7e-08	32.0	2.8	9.5e-07	28.5	0.2	2.3	2	0	0	2	2	2	2	NusA-like	KH	domain
Ribosomal_S7e	PF01251.13	gi|297526103|ref|YP_003668127.1|	-	0.0018	17.7	0.7	0.019	14.4	0.1	2.0	1	1	1	2	2	2	2	Ribosomal	protein	S7e
DUF1634	PF07843.6	gi|297526104|ref|YP_003668128.1|	-	0.022	14.3	0.1	0.062	12.9	0.0	1.8	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1634)
DUF3735	PF12537.3	gi|297526104|ref|YP_003668128.1|	-	0.085	12.9	0.6	0.085	12.9	0.4	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3735)
DUF4179	PF13786.1	gi|297526104|ref|YP_003668128.1|	-	0.76	10.0	5.1	5.7	7.2	0.2	3.1	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4179)
Med3	PF11593.3	gi|297526104|ref|YP_003668128.1|	-	8.8	5.4	17.8	0.034	13.3	3.2	2.1	2	0	0	2	2	2	0	Mediator	complex	subunit	3	fungal
ABC_tran	PF00005.22	gi|297526105|ref|YP_003668129.1|	-	1.5e-28	99.8	0.0	8e-28	97.4	0.0	1.9	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|297526105|ref|YP_003668129.1|	-	2.1e-20	73.8	1.6	3.9e-15	56.5	0.0	2.7	2	1	1	3	3	3	2	AAA	domain
AAA_15	PF13175.1	gi|297526105|ref|YP_003668129.1|	-	0.00015	20.9	0.1	0.0049	15.9	0.0	2.5	3	0	0	3	3	3	1	AAA	ATPase	domain
KdpD	PF02702.12	gi|297526105|ref|YP_003668129.1|	-	0.00059	19.0	0.1	0.0016	17.6	0.1	1.7	1	1	0	1	1	1	1	Osmosensitive	K+	channel	His	kinase	sensor	domain
Rad17	PF03215.10	gi|297526105|ref|YP_003668129.1|	-	0.0071	15.0	0.0	0.0095	14.6	0.0	1.2	1	0	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
AAA_23	PF13476.1	gi|297526105|ref|YP_003668129.1|	-	0.011	16.0	2.6	0.019	15.2	1.7	1.8	1	1	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|297526105|ref|YP_003668129.1|	-	0.052	13.7	0.9	0.19	11.9	0.2	2.3	2	1	0	2	2	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_33	PF13671.1	gi|297526105|ref|YP_003668129.1|	-	0.055	13.3	0.1	0.12	12.2	0.0	1.8	1	1	0	1	1	1	0	AAA	domain
AAA_17	PF13207.1	gi|297526105|ref|YP_003668129.1|	-	0.056	14.2	0.2	0.13	13.0	0.1	2.1	1	1	0	1	1	1	0	AAA	domain
Mur_ligase	PF01225.20	gi|297526105|ref|YP_003668129.1|	-	0.058	13.4	0.0	0.27	11.3	0.0	2.2	3	0	0	3	3	2	0	Mur	ligase	family,	catalytic	domain
SMC_N	PF02463.14	gi|297526105|ref|YP_003668129.1|	-	0.064	12.4	0.3	3.5	6.7	0.0	2.4	3	0	0	3	3	3	0	RecF/RecN/SMC	N	terminal	domain
ACT_4	PF13291.1	gi|297526105|ref|YP_003668129.1|	-	0.066	13.5	0.4	2.3	8.6	0.1	3.1	2	1	1	3	3	3	0	ACT	domain
SbcCD_C	PF13558.1	gi|297526105|ref|YP_003668129.1|	-	0.066	13.1	0.0	0.12	12.2	0.0	1.4	1	0	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
DUF520	PF04461.8	gi|297526105|ref|YP_003668129.1|	-	0.078	12.8	0.2	0.28	11.0	0.1	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF520)
AAA_22	PF13401.1	gi|297526105|ref|YP_003668129.1|	-	0.08	13.0	0.4	1.1	9.3	0.3	2.4	1	1	0	1	1	1	0	AAA	domain
MobB	PF03205.9	gi|297526105|ref|YP_003668129.1|	-	0.092	12.4	0.5	0.24	11.0	0.1	1.8	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
MFS_2	PF13347.1	gi|297526106|ref|YP_003668130.1|	-	1.4e-65	221.3	33.7	1.7e-65	221.1	23.4	1.0	1	0	0	1	1	1	1	MFS/sugar	transport	protein
MFS_1	PF07690.11	gi|297526106|ref|YP_003668130.1|	-	4e-16	58.6	42.1	8.3e-08	31.3	17.4	2.7	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
PIG-L	PF02585.12	gi|297526107|ref|YP_003668131.1|	-	2.4e-28	99.1	0.0	4e-28	98.4	0.0	1.3	1	0	0	1	1	1	1	GlcNAc-PI	de-N-acetylase
ETC_C1_NDUFA5	PF04716.9	gi|297526107|ref|YP_003668131.1|	-	0.015	14.7	0.5	0.037	13.5	0.1	1.9	2	0	0	2	2	2	0	ETC	complex	I	subunit	conserved	region
DUF4296	PF14129.1	gi|297526107|ref|YP_003668131.1|	-	0.026	14.6	0.2	0.055	13.6	0.1	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4296)
NAGidase	PF07555.8	gi|297526108|ref|YP_003668132.1|	-	1.4e-85	286.9	0.0	2.2e-85	286.2	0.0	1.3	1	0	0	1	1	1	1	beta-N-acetylglucosaminidase
IcmF-related	PF06761.7	gi|297526108|ref|YP_003668132.1|	-	0.059	12.6	0.1	0.095	11.9	0.0	1.2	1	0	0	1	1	1	0	Intracellular	multiplication	and	human	macrophage-killing
Acetyltransf_7	PF13508.1	gi|297526109|ref|YP_003668133.1|	-	8.6e-08	32.2	0.3	7e-05	22.9	0.1	2.5	2	0	0	2	2	2	2	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|297526109|ref|YP_003668133.1|	-	4e-05	23.7	0.0	0.0013	18.8	0.0	2.3	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.19	gi|297526109|ref|YP_003668133.1|	-	6.6e-05	22.8	0.0	0.0026	17.7	0.0	2.9	2	1	0	2	2	2	1	Acetyltransferase	(GNAT)	family
Acetyltransf_CG	PF14542.1	gi|297526109|ref|YP_003668133.1|	-	0.0033	17.2	0.0	0.06	13.2	0.0	2.6	3	0	0	3	3	3	1	GCN5-related	N-acetyl-transferase
Acetyltransf_9	PF13527.1	gi|297526109|ref|YP_003668133.1|	-	0.0083	15.9	0.0	0.058	13.2	0.0	2.3	3	0	0	3	3	3	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|297526109|ref|YP_003668133.1|	-	0.0097	15.8	1.9	0.16	11.9	0.6	2.5	2	1	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
TA0956	PF11513.3	gi|297526109|ref|YP_003668133.1|	-	0.39	10.7	2.9	2.1	8.4	0.1	2.7	2	1	1	3	3	3	0	Thermoplasma	acidophilum	protein	TA0956
Glyco_hydro_4	PF02056.11	gi|297526110|ref|YP_003668134.1|	-	2.7e-46	157.1	0.1	4.8e-46	156.3	0.0	1.4	1	0	0	1	1	1	1	Family	4	glycosyl	hydrolase
Glyco_hydro_4C	PF11975.3	gi|297526110|ref|YP_003668134.1|	-	1.2e-38	133.2	0.0	2.3e-38	132.2	0.0	1.5	1	0	0	1	1	1	1	Family	4	glycosyl	hydrolase	C-terminal	domain
Ldh_1_N	PF00056.18	gi|297526110|ref|YP_003668134.1|	-	0.0093	15.7	0.2	5.6	6.7	0.1	2.4	2	0	0	2	2	2	2	lactate/malate	dehydrogenase,	NAD	binding	domain
HupE_UreJ_2	PF13795.1	gi|297526110|ref|YP_003668134.1|	-	0.042	13.3	0.0	0.067	12.6	0.0	1.3	1	0	0	1	1	1	0	HupE	/	UreJ	protein
DUF3677	PF12432.3	gi|297526110|ref|YP_003668134.1|	-	0.18	12.2	0.0	0.36	11.3	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3677)
Nitro_FeMo-Co	PF02579.12	gi|297526111|ref|YP_003668135.1|	-	9.7e-20	70.4	0.1	1.1e-19	70.2	0.0	1.0	1	0	0	1	1	1	1	Dinitrogenase	iron-molybdenum	cofactor
CbiA	PF01656.18	gi|297526112|ref|YP_003668136.1|	-	1.3e-27	96.5	0.0	1.8e-27	96.0	0.0	1.2	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Fer4	PF00037.22	gi|297526112|ref|YP_003668136.1|	-	8.8e-13	47.2	14.8	2.5e-08	33.1	3.6	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|297526112|ref|YP_003668136.1|	-	9.1e-12	45.1	3.4	1.5e-06	28.4	0.1	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|297526112|ref|YP_003668136.1|	-	7.4e-11	41.4	13.0	9.8e-07	28.3	2.6	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|297526112|ref|YP_003668136.1|	-	3.6e-10	39.4	9.3	7.1e-10	38.5	6.5	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|297526112|ref|YP_003668136.1|	-	1.7e-09	37.4	10.3	3.5e-09	36.3	7.2	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|297526112|ref|YP_003668136.1|	-	2.9e-08	33.8	12.9	5.3e-08	32.9	9.0	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|297526112|ref|YP_003668136.1|	-	3.3e-08	34.1	3.7	0.0022	18.6	0.3	2.4	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.2	gi|297526112|ref|YP_003668136.1|	-	3.4e-08	32.9	12.9	0.00011	21.8	1.9	2.7	3	0	0	3	3	2	2	4Fe-4S	binding	domain
ArsA_ATPase	PF02374.10	gi|297526112|ref|YP_003668136.1|	-	8.9e-07	28.2	0.1	6.8e-06	25.3	0.1	2.1	2	0	0	2	2	2	1	Anion-transporting	ATPase
Fer4_8	PF13183.1	gi|297526112|ref|YP_003668136.1|	-	8.1e-06	25.7	10.8	2e-05	24.4	7.5	1.7	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_NifH	PF00142.13	gi|297526112|ref|YP_003668136.1|	-	1.1e-05	24.7	0.0	0.12	11.5	0.0	2.1	2	0	0	2	2	2	2	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
Fer4_3	PF12798.2	gi|297526112|ref|YP_003668136.1|	-	2e-05	24.7	15.7	0.0027	18.1	3.0	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|297526112|ref|YP_003668136.1|	-	0.00044	20.6	6.8	0.011	16.1	0.4	2.4	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|297526112|ref|YP_003668136.1|	-	0.0013	18.8	13.6	0.0031	17.7	2.3	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
AAA_31	PF13614.1	gi|297526112|ref|YP_003668136.1|	-	0.0029	17.5	0.0	0.0057	16.5	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|297526112|ref|YP_003668136.1|	-	0.0056	17.4	0.2	0.014	16.2	0.0	1.8	2	1	0	2	2	1	1	AAA	domain
MipZ	PF09140.6	gi|297526112|ref|YP_003668136.1|	-	0.0083	15.2	0.1	0.012	14.6	0.1	1.3	1	0	0	1	1	1	1	ATPase	MipZ
Fer4_17	PF13534.1	gi|297526112|ref|YP_003668136.1|	-	0.013	15.8	2.1	0.013	15.8	1.5	2.4	1	1	2	3	3	2	0	4Fe-4S	dicluster	domain
GTP_EFTU	PF00009.22	gi|297526112|ref|YP_003668136.1|	-	0.023	14.1	0.0	0.35	10.2	0.0	2.4	2	1	1	3	3	3	0	Elongation	factor	Tu	GTP	binding	domain
ParA	PF10609.4	gi|297526112|ref|YP_003668136.1|	-	0.036	13.9	0.0	0.26	11.1	0.0	2.3	2	0	0	2	2	2	0	ParA/MinD	ATPase	like
AAA_25	PF13481.1	gi|297526112|ref|YP_003668136.1|	-	0.074	12.4	0.1	0.14	11.5	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Fer4_15	PF13459.1	gi|297526112|ref|YP_003668136.1|	-	0.11	13.0	7.2	4.8	7.8	0.3	2.6	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_11	PF13247.1	gi|297526112|ref|YP_003668136.1|	-	0.14	12.1	6.1	0.33	10.8	4.2	1.6	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|297526112|ref|YP_003668136.1|	-	0.64	10.4	10.0	0.25	11.7	1.3	2.5	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
CbiA	PF01656.18	gi|297526113|ref|YP_003668137.1|	-	1.1e-29	103.3	0.0	1.4e-29	102.9	0.0	1.1	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Fer4	PF00037.22	gi|297526113|ref|YP_003668137.1|	-	2.2e-13	49.1	13.0	1.5e-06	27.5	1.6	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|297526113|ref|YP_003668137.1|	-	9.7e-11	41.0	12.6	1.6e-05	24.5	1.9	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|297526113|ref|YP_003668137.1|	-	2.9e-08	33.8	6.9	0.00054	20.1	0.1	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|297526113|ref|YP_003668137.1|	-	3.2e-08	33.0	10.1	0.0004	20.1	0.9	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|297526113|ref|YP_003668137.1|	-	1.6e-07	31.5	11.5	6.3e-07	29.6	8.3	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|297526113|ref|YP_003668137.1|	-	1.7e-07	30.9	19.9	1.8e-06	27.5	7.9	1.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|297526113|ref|YP_003668137.1|	-	5.5e-07	30.2	7.1	0.01	16.5	0.2	2.4	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.1	gi|297526113|ref|YP_003668137.1|	-	8.8e-07	28.6	6.4	1.5e-06	27.9	4.5	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
AAA_31	PF13614.1	gi|297526113|ref|YP_003668137.1|	-	1.6e-06	28.1	0.0	0.00078	19.4	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
Fer4_17	PF13534.1	gi|297526113|ref|YP_003668137.1|	-	3.1e-05	24.2	6.2	0.034	14.5	0.9	2.4	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|297526113|ref|YP_003668137.1|	-	0.00056	20.4	3.8	0.18	12.3	0.4	2.5	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_8	PF13183.1	gi|297526113|ref|YP_003668137.1|	-	0.0011	18.9	9.9	0.16	11.9	1.0	2.3	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|297526113|ref|YP_003668137.1|	-	0.0011	19.1	15.9	0.029	14.6	2.7	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_11	PF13247.1	gi|297526113|ref|YP_003668137.1|	-	0.0035	17.1	3.8	0.0068	16.2	2.6	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_NifH	PF00142.13	gi|297526113|ref|YP_003668137.1|	-	0.0076	15.4	0.3	0.093	11.9	0.0	2.0	2	0	0	2	2	2	1	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
AAA_25	PF13481.1	gi|297526113|ref|YP_003668137.1|	-	0.016	14.5	0.0	0.027	13.8	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Fer4_18	PF13746.1	gi|297526113|ref|YP_003668137.1|	-	0.018	15.4	6.8	0.97	9.9	0.2	2.4	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
AAA_19	PF13245.1	gi|297526113|ref|YP_003668137.1|	-	0.03	14.0	0.1	11	5.8	0.0	2.5	2	0	0	2	2	2	0	Part	of	AAA	domain
ArsA_ATPase	PF02374.10	gi|297526113|ref|YP_003668137.1|	-	0.031	13.3	0.6	0.07	12.1	0.1	1.7	2	0	0	2	2	2	0	Anion-transporting	ATPase
ParA	PF10609.4	gi|297526113|ref|YP_003668137.1|	-	0.035	13.9	0.4	0.12	12.2	0.3	1.9	1	1	0	1	1	1	0	ParA/MinD	ATPase	like
Fer4_3	PF12798.2	gi|297526113|ref|YP_003668137.1|	-	0.039	14.5	18.0	0.11	13.0	3.4	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
MipZ	PF09140.6	gi|297526113|ref|YP_003668137.1|	-	0.044	12.8	0.0	0.085	11.9	0.0	1.4	1	0	0	1	1	1	0	ATPase	MipZ
PhoH	PF02562.11	gi|297526113|ref|YP_003668137.1|	-	0.048	12.8	0.2	0.12	11.5	0.1	1.7	1	0	0	1	1	1	0	PhoH-like	protein
NAD_binding_10	PF13460.1	gi|297526113|ref|YP_003668137.1|	-	0.072	13.0	1.1	1.6	8.7	0.0	2.1	2	0	0	2	2	2	0	NADH(P)-binding
Fer4_13	PF13370.1	gi|297526113|ref|YP_003668137.1|	-	4.6	7.7	14.7	6.8	7.1	3.2	2.4	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
DUF4065	PF13274.1	gi|297526114|ref|YP_003668138.1|	-	2.5e-05	24.9	1.0	6.5e-05	23.5	0.8	1.6	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF4065)
GDPD	PF03009.12	gi|297526115|ref|YP_003668139.1|	-	2.7e-07	30.3	0.2	5.4e-07	29.3	0.1	1.7	2	1	0	2	2	2	1	Glycerophosphoryl	diester	phosphodiesterase	family
GDPD_2	PF13653.1	gi|297526115|ref|YP_003668139.1|	-	0.0019	18.3	0.1	0.0043	17.1	0.0	1.6	1	0	0	1	1	1	1	Glycerophosphoryl	diester	phosphodiesterase	family
EamA	PF00892.15	gi|297526116|ref|YP_003668140.1|	-	2.6e-32	111.5	27.5	3e-17	62.8	6.0	2.2	2	0	0	2	2	2	2	EamA-like	transporter	family
EmrE	PF13536.1	gi|297526116|ref|YP_003668140.1|	-	7.9e-10	38.9	25.5	8.6e-06	25.9	3.2	3.3	1	1	2	3	3	3	3	Multidrug	resistance	efflux	transporter
DUF4538	PF15061.1	gi|297526116|ref|YP_003668140.1|	-	0.12	11.7	0.3	20	4.5	0.0	2.6	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4538)
NTP_transf_2	PF01909.18	gi|297526117|ref|YP_003668141.1|	-	1.1e-10	41.6	2.1	2.3e-10	40.6	1.3	1.7	1	1	0	1	1	1	1	Nucleotidyltransferase	domain
DUF294	PF03445.8	gi|297526117|ref|YP_003668141.1|	-	0.061	12.9	0.0	0.16	11.5	0.0	1.7	2	0	0	2	2	2	0	Putative	nucleotidyltransferase	DUF294
HEPN	PF05168.9	gi|297526118|ref|YP_003668142.1|	-	1.5e-22	79.6	0.3	1.8e-22	79.4	0.2	1.0	1	0	0	1	1	1	1	HEPN	domain
DUF4398	PF14346.1	gi|297526118|ref|YP_003668142.1|	-	0.18	11.8	2.5	8.6	6.4	0.1	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4398)
MFS_1	PF07690.11	gi|297526119|ref|YP_003668143.1|	-	8.7e-20	70.7	46.7	1.4e-19	70.0	32.3	1.3	1	0	0	1	1	1	1	Major	Facilitator	Superfamily
PNP_UDP_1	PF01048.15	gi|297526120|ref|YP_003668144.1|	-	6.8e-31	107.0	0.0	8.3e-31	106.7	0.0	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
ADH_N	PF08240.7	gi|297526121|ref|YP_003668145.1|	-	7e-31	106.2	1.2	1.1e-30	105.6	0.8	1.3	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|297526121|ref|YP_003668145.1|	-	8.3e-17	60.9	0.0	1.5e-16	60.1	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_N_assoc	PF13823.1	gi|297526121|ref|YP_003668145.1|	-	2.4e-05	23.8	0.0	7.7e-05	22.2	0.0	2.0	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-associated
ADH_zinc_N_2	PF13602.1	gi|297526121|ref|YP_003668145.1|	-	2.8e-05	25.0	0.0	9.6e-05	23.2	0.0	1.8	3	0	0	3	3	3	1	Zinc-binding	dehydrogenase
NADH_4Fe-4S	PF10589.4	gi|297526121|ref|YP_003668145.1|	-	1.1	8.4	3.8	0.39	9.9	0.4	1.9	2	0	0	2	2	2	0	NADH-ubiquinone	oxidoreductase-F	iron-sulfur	binding	region
Radical_SAM	PF04055.16	gi|297526122|ref|YP_003668146.1|	-	1.5e-16	61.0	0.1	3.3e-16	59.8	0.0	1.6	2	0	0	2	2	1	1	Radical	SAM	superfamily
zf-ribbon_3	PF13248.1	gi|297526122|ref|YP_003668146.1|	-	0.00045	19.3	1.9	0.0045	16.1	0.2	2.8	2	1	0	2	2	2	1	zinc-ribbon	domain
UPF0547	PF10571.4	gi|297526122|ref|YP_003668146.1|	-	0.0052	16.4	0.5	0.0052	16.4	0.3	2.8	3	1	0	3	3	2	1	Uncharacterised	protein	family	UPF0547
TF_Zn_Ribbon	PF08271.7	gi|297526122|ref|YP_003668146.1|	-	0.0057	15.9	2.9	7.1	6.0	0.0	4.0	4	0	0	4	4	4	1	TFIIB	zinc-binding
Fer4_12	PF13353.1	gi|297526122|ref|YP_003668146.1|	-	0.0093	16.0	0.1	0.019	15.0	0.1	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
DZR	PF12773.2	gi|297526122|ref|YP_003668146.1|	-	0.021	14.6	0.1	0.021	14.6	0.1	2.6	3	0	0	3	3	3	0	Double	zinc	ribbon
TerY-C	PF15616.1	gi|297526122|ref|YP_003668146.1|	-	0.037	13.9	0.9	1.2	9.0	0.0	3.0	3	0	0	3	3	3	0	TerY-C	metal	binding	domain
Fer4_14	PF13394.1	gi|297526122|ref|YP_003668146.1|	-	0.05	13.6	1.3	0.11	12.4	0.0	2.2	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
zinc_ribbon_2	PF13240.1	gi|297526122|ref|YP_003668146.1|	-	0.084	12.3	7.3	2	8.0	0.1	3.3	3	0	0	3	3	3	0	zinc-ribbon	domain
zf-C4_Topoisom	PF01396.14	gi|297526122|ref|YP_003668146.1|	-	0.27	10.7	4.5	7.3	6.1	0.1	3.4	3	0	0	3	3	3	0	Topoisomerase	DNA	binding	C4	zinc	finger
zf-CCHC_5	PF14787.1	gi|297526122|ref|YP_003668146.1|	-	1.2	8.7	7.7	1.6	8.2	0.6	2.7	2	0	0	2	2	2	0	GAG-polyprotein	viral	zinc-finger
Rubredoxin	PF00301.15	gi|297526122|ref|YP_003668146.1|	-	2.6	7.9	12.1	3.9	7.4	0.1	4.0	4	0	0	4	4	4	0	Rubredoxin
OrfB_Zn_ribbon	PF07282.6	gi|297526122|ref|YP_003668146.1|	-	3.7	7.2	11.5	0.037	13.6	1.7	2.4	3	1	0	3	3	3	0	Putative	transposase	DNA-binding	domain
Ogr_Delta	PF04606.7	gi|297526122|ref|YP_003668146.1|	-	4.2	7.1	6.7	28	4.4	2.6	3.1	2	1	1	3	3	3	0	Ogr/Delta-like	zinc	finger
zinc_ribbon_4	PF13717.1	gi|297526122|ref|YP_003668146.1|	-	6.7	6.4	11.7	22	4.8	0.1	4.1	4	0	0	4	4	4	0	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|297526122|ref|YP_003668146.1|	-	8.8	6.0	12.1	18	4.9	0.1	4.1	4	0	0	4	4	4	0	zinc-ribbon	domain
DUF2204	PF09970.4	gi|297526123|ref|YP_003668147.1|	-	2.4e-61	206.3	1.2	2.7e-61	206.1	0.9	1.0	1	0	0	1	1	1	1	Nucleotidyl	transferase	of	unknown	function	(DUF2204)
NTP_transf_5	PF14907.1	gi|297526123|ref|YP_003668147.1|	-	0.0074	15.6	0.0	0.0092	15.3	0.0	1.2	1	0	0	1	1	1	1	Uncharacterised	nucleotidyltransferase
ApoB100_C	PF12491.3	gi|297526123|ref|YP_003668147.1|	-	0.0078	15.8	0.2	0.12	12.0	0.1	2.3	2	0	0	2	2	2	1	Apolipoprotein	B100	C	terminal
NTP_transf_2	PF01909.18	gi|297526123|ref|YP_003668147.1|	-	0.24	11.7	3.7	3.2	8.1	2.6	2.3	1	1	0	1	1	1	0	Nucleotidyltransferase	domain
DUF308	PF03729.8	gi|297526124|ref|YP_003668148.1|	-	0.05	13.5	0.8	0.056	13.4	0.6	1.1	1	0	0	1	1	1	0	Short	repeat	of	unknown	function	(DUF308)
NnrU	PF07298.6	gi|297526125|ref|YP_003668149.1|	-	0.086	12.2	0.3	0.092	12.1	0.2	1.0	1	0	0	1	1	1	0	NnrU	protein
Ribosomal_L40e	PF01020.12	gi|297526126|ref|YP_003668150.1|	-	5.1e-06	25.9	8.2	5.8e-06	25.8	5.7	1.1	1	0	0	1	1	1	1	Ribosomal	L40e	family
zf-ribbon_3	PF13248.1	gi|297526126|ref|YP_003668150.1|	-	0.00054	19.0	3.2	0.00067	18.7	2.2	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|297526126|ref|YP_003668150.1|	-	0.00073	18.9	1.9	0.0011	18.4	1.3	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-RanBP	PF00641.13	gi|297526126|ref|YP_003668150.1|	-	0.0012	17.8	4.8	0.0012	17.8	3.3	1.5	1	1	1	2	2	2	2	Zn-finger	in	Ran	binding	protein	and	others
DZR	PF12773.2	gi|297526126|ref|YP_003668150.1|	-	0.0016	18.2	1.5	0.0018	18.0	1.0	1.1	1	0	0	1	1	1	1	Double	zinc	ribbon
HypA	PF01155.14	gi|297526126|ref|YP_003668150.1|	-	0.016	14.9	0.2	0.016	14.8	0.1	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
DUF35_N	PF12172.3	gi|297526126|ref|YP_003668150.1|	-	0.076	12.9	2.1	0.098	12.5	1.4	1.2	1	0	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-DHHC	PF01529.15	gi|297526126|ref|YP_003668150.1|	-	0.17	11.2	1.8	0.18	11.1	1.2	1.1	1	0	0	1	1	1	0	DHHC	palmitoyltransferase
DUF2688	PF10892.3	gi|297526126|ref|YP_003668150.1|	-	0.94	9.1	4.7	8.6	6.1	0.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2688)
zf-MYND	PF01753.13	gi|297526126|ref|YP_003668150.1|	-	1	9.2	4.9	1.5	8.8	3.4	1.2	1	0	0	1	1	1	0	MYND	finger
RNA_POL_M_15KD	PF02150.11	gi|297526126|ref|YP_003668150.1|	-	2	8.1	5.7	3.9	7.2	0.1	2.1	1	1	1	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
Mu-like_Com	PF10122.4	gi|297526126|ref|YP_003668150.1|	-	5	6.2	10.7	1.5	7.9	0.7	2.2	1	1	1	2	2	2	0	Mu-like	prophage	protein	Com
zf-FPG_IleRS	PF06827.9	gi|297526126|ref|YP_003668150.1|	-	6.9	6.4	10.8	4.3	7.0	0.8	2.3	1	1	1	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
Ribosomal_L37e	PF01907.14	gi|297526126|ref|YP_003668150.1|	-	8.4	6.2	9.2	8.3	6.3	0.8	2.1	1	1	1	2	2	2	0	Ribosomal	protein	L37e
GDPD	PF03009.12	gi|297526127|ref|YP_003668151.1|	-	2.7e-29	102.4	0.0	3.3e-28	98.8	0.0	2.0	1	1	0	1	1	1	1	Glycerophosphoryl	diester	phosphodiesterase	family
GDPD_2	PF13653.1	gi|297526127|ref|YP_003668151.1|	-	0.027	14.6	0.0	0.16	12.1	0.0	2.1	2	0	0	2	2	2	0	Glycerophosphoryl	diester	phosphodiesterase	family
Peptidase_C15	PF01470.12	gi|297526128|ref|YP_003668152.1|	-	2.4e-11	43.8	0.0	3e-11	43.5	0.0	1.1	1	0	0	1	1	1	1	Pyroglutamyl	peptidase
N6_N4_Mtase	PF01555.13	gi|297526129|ref|YP_003668153.1|	-	1.3e-41	142.6	0.0	1.7e-41	142.1	0.0	1.2	1	0	0	1	1	1	1	DNA	methylase
Methyltransf_26	PF13659.1	gi|297526129|ref|YP_003668153.1|	-	6.7e-16	58.3	0.0	2e-07	31.0	0.0	2.3	2	0	0	2	2	2	2	Methyltransferase	domain
UPF0020	PF01170.13	gi|297526129|ref|YP_003668153.1|	-	7e-08	32.2	0.0	2.5e-06	27.2	0.0	2.2	2	0	0	2	2	2	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_11	PF08241.7	gi|297526129|ref|YP_003668153.1|	-	1.9e-06	28.2	0.0	0.017	15.5	0.0	2.9	2	1	0	2	2	2	2	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|297526129|ref|YP_003668153.1|	-	0.00021	21.8	0.0	0.11	13.0	0.0	2.4	2	0	0	2	2	2	2	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|297526129|ref|YP_003668153.1|	-	0.0015	18.1	0.0	0.096	12.2	0.0	2.2	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|297526129|ref|YP_003668153.1|	-	0.054	13.2	0.0	1.7	8.3	0.0	2.4	2	0	0	2	2	2	0	Methyltransferase	domain
Phage_attach	PF05354.6	gi|297526129|ref|YP_003668153.1|	-	0.076	12.5	0.0	0.14	11.7	0.0	1.3	1	0	0	1	1	1	0	Phage	Head-Tail	Attachment
Met_10	PF02475.11	gi|297526129|ref|YP_003668153.1|	-	0.082	12.4	0.0	0.17	11.4	0.0	1.4	1	0	0	1	1	1	0	Met-10+	like-protein
Methyltransf_15	PF09445.5	gi|297526129|ref|YP_003668153.1|	-	0.13	11.8	0.0	0.61	9.6	0.0	1.9	2	0	0	2	2	2	0	RNA	cap	guanine-N2	methyltransferase
TFIIE_alpha	PF02002.12	gi|297526132|ref|YP_003668156.1|	-	8.3e-05	22.0	0.3	0.00032	20.1	0.1	2.1	2	0	0	2	2	2	1	TFIIE	alpha	subunit
TrmB	PF01978.14	gi|297526132|ref|YP_003668156.1|	-	0.0055	16.3	0.4	0.011	15.3	0.3	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
YtzH	PF14165.1	gi|297526132|ref|YP_003668156.1|	-	0.048	13.8	0.3	0.81	9.9	0.0	2.6	2	1	1	3	3	3	0	YtzH-like	protein
DUF2582	PF10771.4	gi|297526132|ref|YP_003668156.1|	-	0.062	13.1	0.0	0.16	11.8	0.0	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2582)
DUF1804	PF08822.6	gi|297526132|ref|YP_003668156.1|	-	0.076	12.7	0.1	1.3	8.6	0.0	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1804)
HTH_34	PF13601.1	gi|297526132|ref|YP_003668156.1|	-	0.21	11.6	0.9	0.44	10.6	0.2	1.8	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
DUF4423	PF14394.1	gi|297526132|ref|YP_003668156.1|	-	0.32	10.5	3.7	0.51	9.8	0.2	2.5	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4423)
HEPN	PF05168.9	gi|297526135|ref|YP_003668159.1|	-	7.5e-24	83.8	0.2	9.7e-24	83.5	0.1	1.1	1	0	0	1	1	1	1	HEPN	domain
NTP_transf_2	PF01909.18	gi|297526136|ref|YP_003668160.1|	-	5.7e-11	42.6	0.1	7.2e-11	42.2	0.1	1.2	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
Adenyl_cycl_N	PF12633.2	gi|297526136|ref|YP_003668160.1|	-	0.00048	19.7	0.0	0.00055	19.5	0.0	1.1	1	0	0	1	1	1	1	Adenylate	cyclase	NT	domain
Transglut_core	PF01841.14	gi|297526137|ref|YP_003668161.1|	-	0.0001	22.4	0.0	0.00089	19.4	0.0	2.3	1	1	1	2	2	2	1	Transglutaminase-like	superfamily
DUF2665	PF11654.3	gi|297526138|ref|YP_003668162.1|	-	0.055	13.0	0.0	0.12	11.9	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2665)
Antitoxin-MazE	PF04014.13	gi|297526141|ref|YP_003668165.1|	-	3.9e-10	39.2	0.0	7.4e-10	38.3	0.0	1.4	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
PHO4	PF01384.15	gi|297526142|ref|YP_003668166.1|	-	1.6e-73	247.2	45.5	4.9e-73	245.6	31.6	1.7	1	1	0	1	1	1	1	Phosphate	transporter	family
DUF2244	PF10003.4	gi|297526142|ref|YP_003668166.1|	-	1.9	7.8	6.7	0.26	10.6	0.7	2.5	2	0	0	2	2	2	0	Integral	membrane	protein	(DUF2244)
AFOR_C	PF01314.13	gi|297526144|ref|YP_003668168.1|	-	3.3e-153	509.8	0.0	4.1e-153	509.6	0.0	1.1	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	domains	2	&	3
AFOR_N	PF02730.10	gi|297526144|ref|YP_003668168.1|	-	3.9e-82	274.5	0.0	6.8e-82	273.6	0.0	1.4	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
EamA	PF00892.15	gi|297526145|ref|YP_003668169.1|	-	5.3e-21	74.9	54.2	5e-13	49.1	12.7	3.4	2	2	2	4	4	4	2	EamA-like	transporter	family
B12-binding	PF02310.14	gi|297526146|ref|YP_003668170.1|	-	6.2e-26	90.6	0.0	1.3e-25	89.6	0.0	1.5	1	0	0	1	1	1	1	B12	binding	domain
Radical_SAM	PF04055.16	gi|297526146|ref|YP_003668170.1|	-	3.3e-23	82.6	0.2	1.4e-22	80.6	0.1	2.0	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|297526146|ref|YP_003668170.1|	-	3.5e-05	23.9	0.1	8.4e-05	22.7	0.0	1.8	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Radical_SAM_N	PF08497.5	gi|297526146|ref|YP_003668170.1|	-	0.0037	16.2	0.0	0.9	8.4	0.0	2.3	2	0	0	2	2	2	2	Radical	SAM	N-terminal
Radical_SAM	PF04055.16	gi|297526147|ref|YP_003668171.1|	-	2.5e-26	92.8	0.0	4.8e-26	91.8	0.0	1.5	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|297526147|ref|YP_003668171.1|	-	1.5e-09	38.0	0.0	9.7e-09	35.4	0.0	2.3	3	1	0	3	3	3	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|297526147|ref|YP_003668171.1|	-	4.8e-08	33.0	0.0	2.7e-07	30.6	0.0	2.3	3	1	0	3	3	3	1	4Fe-4S	single	cluster	domain
SPASM	PF13186.1	gi|297526147|ref|YP_003668171.1|	-	4.9e-06	26.7	0.2	1.2e-05	25.5	0.1	1.7	1	0	0	1	1	1	1	Iron-sulfur	cluster-binding	domain
HMGL-like	PF00682.14	gi|297526147|ref|YP_003668171.1|	-	0.0021	17.7	0.0	0.0035	17.0	0.0	1.3	1	0	0	1	1	1	1	HMGL-like
AP_endonuc_2	PF01261.19	gi|297526147|ref|YP_003668171.1|	-	0.0099	15.1	0.0	0.022	14.0	0.0	1.6	1	1	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
Usp	PF00582.21	gi|297526148|ref|YP_003668172.1|	-	3.1e-25	88.9	0.5	3.6e-25	88.7	0.4	1.0	1	0	0	1	1	1	1	Universal	stress	protein	family
SBF	PF01758.11	gi|297526149|ref|YP_003668173.1|	-	8.8e-37	126.3	27.6	8.8e-37	126.3	19.1	3.7	3	2	0	3	3	3	1	Sodium	Bile	acid	symporter	family
DUF4137	PF13593.1	gi|297526149|ref|YP_003668173.1|	-	5e-17	61.9	27.4	9.1e-17	61.1	19.0	1.4	1	0	0	1	1	1	1	SBF-like	CPA	transporter	family	(DUF4137)
Sec62	PF03839.11	gi|297526149|ref|YP_003668173.1|	-	0.1	11.9	7.6	0.24	10.7	5.3	1.7	1	0	0	1	1	1	0	Translocation	protein	Sec62
Na_H_Exchanger	PF00999.16	gi|297526150|ref|YP_003668174.1|	-	1.7e-51	174.9	47.5	2.1e-51	174.6	32.9	1.0	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
CitMHS	PF03600.11	gi|297526151|ref|YP_003668175.1|	-	4.3e-40	137.3	35.1	1.3e-36	125.9	19.6	1.7	1	1	1	2	2	2	2	Citrate	transporter
ArsB	PF02040.10	gi|297526151|ref|YP_003668175.1|	-	6.8e-15	54.9	32.6	8.7e-15	54.6	22.6	1.0	1	0	0	1	1	1	1	Arsenical	pump	membrane	protein
DctM	PF06808.7	gi|297526151|ref|YP_003668175.1|	-	1.5e-06	27.0	33.1	0.00015	20.5	5.4	2.2	1	1	1	2	2	2	2	DctM-like	transporters
NADHdh	PF00146.16	gi|297526152|ref|YP_003668176.1|	-	6.6e-37	127.2	20.9	7.8e-37	126.9	14.5	1.0	1	0	0	1	1	1	1	NADH	dehydrogenase
Yip1	PF04893.12	gi|297526153|ref|YP_003668177.1|	-	0.00042	19.8	0.7	0.5	9.8	0.1	2.0	2	0	0	2	2	2	2	Yip1	domain
MNHE	PF01899.11	gi|297526154|ref|YP_003668178.1|	-	2.3e-38	131.2	3.4	2.6e-38	131.1	2.3	1.0	1	0	0	1	1	1	1	Na+/H+	ion	antiporter	subunit
DUF3792	PF12670.2	gi|297526154|ref|YP_003668178.1|	-	0.0018	18.1	6.5	0.0028	17.4	4.5	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3792)
Pex2_Pex12	PF04757.9	gi|297526154|ref|YP_003668178.1|	-	0.029	13.7	1.3	0.23	10.8	0.0	2.0	1	1	1	2	2	2	0	Pex2	/	Pex12	amino	terminal	region
DUF2512	PF10710.4	gi|297526154|ref|YP_003668178.1|	-	0.46	9.9	4.6	0.72	9.3	3.2	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2512)
PAP2	PF01569.16	gi|297526154|ref|YP_003668178.1|	-	1	9.0	4.2	0.74	9.5	1.4	1.9	2	0	0	2	2	2	0	PAP2	superfamily
Oxidored_q2	PF00420.19	gi|297526155|ref|YP_003668179.1|	-	3.1e-16	58.7	2.8	4.1e-16	58.3	2.0	1.1	1	0	0	1	1	1	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	4L
ATP-synt_C	PF00137.16	gi|297526155|ref|YP_003668179.1|	-	3.4	7.6	8.1	0.35	10.8	0.6	2.5	2	1	0	2	2	2	0	ATP	synthase	subunit	C
MnhB	PF04039.8	gi|297526156|ref|YP_003668180.1|	-	2.6e-12	46.8	17.5	2.6e-12	46.8	12.1	2.7	2	1	0	2	2	2	1	Domain	related	to	MnhB	subunit	of	Na+/H+	antiporter
DUF2106	PF09879.4	gi|297526156|ref|YP_003668180.1|	-	0.026	13.8	0.0	0.026	13.8	0.0	2.2	2	0	0	2	2	2	0	Predicted	membrane	protein	(DUF2106)
DUF4040	PF13244.1	gi|297526157|ref|YP_003668181.1|	-	1.4e-11	44.1	6.5	1.4e-11	44.1	4.5	1.3	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4040)
Oxidored_q3	PF00499.15	gi|297526157|ref|YP_003668181.1|	-	0.0019	18.0	1.1	0.0019	18.0	0.8	1.8	1	1	1	2	2	2	1	NADH-ubiquinone/plastoquinone	oxidoreductase	chain	6
TCR_zetazeta	PF11628.3	gi|297526157|ref|YP_003668181.1|	-	0.0077	15.6	1.3	0.0077	15.6	0.9	2.0	3	0	0	3	3	3	1	T-cell	surface	glycoprotein	CD3	zeta	chain
Rnf-Nqr	PF02508.9	gi|297526157|ref|YP_003668181.1|	-	0.012	15.2	3.8	0.019	14.5	2.7	1.2	1	1	0	1	1	1	0	Rnf-Nqr	subunit,	membrane	protein
DUF1119	PF06550.6	gi|297526157|ref|YP_003668181.1|	-	0.05	12.7	5.2	0.059	12.4	3.6	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1119)
FA_desaturase	PF00487.19	gi|297526157|ref|YP_003668181.1|	-	0.45	9.9	2.3	0.53	9.6	1.6	1.1	1	0	0	1	1	1	0	Fatty	acid	desaturase
PhaG_MnhG_YufB	PF03334.9	gi|297526158|ref|YP_003668182.1|	-	5.7e-19	67.9	7.0	7.1e-19	67.6	4.9	1.1	1	0	0	1	1	1	1	Na+/H+	antiporter	subunit
MrpF_PhaF	PF04066.8	gi|297526159|ref|YP_003668183.1|	-	8.3e-06	25.9	1.0	8.3e-06	25.9	0.7	1.8	2	0	0	2	2	2	1	Multiple	resistance	and	pH	regulation	protein	F	(MrpF	/	PhaF)
Fer4	PF00037.22	gi|297526160|ref|YP_003668184.1|	-	9.7e-18	62.9	12.1	6.7e-10	38.1	1.9	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|297526160|ref|YP_003668184.1|	-	5.7e-13	49.0	9.3	9.5e-13	48.3	6.4	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|297526160|ref|YP_003668184.1|	-	1.3e-12	47.3	18.9	2.1e-08	33.8	7.2	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|297526160|ref|YP_003668184.1|	-	2e-12	46.2	11.8	5.3e-06	26.0	1.3	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|297526160|ref|YP_003668184.1|	-	2.7e-12	46.2	19.2	2.6e-09	36.7	7.4	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|297526160|ref|YP_003668184.1|	-	8.8e-12	44.3	13.8	2e-06	27.4	1.0	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|297526160|ref|YP_003668184.1|	-	1.2e-11	44.7	8.7	2.3e-11	43.7	6.0	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|297526160|ref|YP_003668184.1|	-	6.8e-11	42.7	4.1	2.3e-05	25.0	0.1	2.3	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_8	PF13183.1	gi|297526160|ref|YP_003668184.1|	-	4.2e-10	39.4	20.2	5e-08	32.8	7.1	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|297526160|ref|YP_003668184.1|	-	5.9e-10	39.3	2.9	0.00029	21.1	0.2	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|297526160|ref|YP_003668184.1|	-	2.9e-08	33.3	10.3	0.00025	21.1	1.5	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|297526160|ref|YP_003668184.1|	-	2.3e-07	31.2	4.0	0.0028	18.1	0.1	2.5	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_3	PF12798.2	gi|297526160|ref|YP_003668184.1|	-	2e-06	27.9	20.6	0.0025	18.2	4.3	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|297526160|ref|YP_003668184.1|	-	6.4e-05	23.2	12.3	0.016	15.6	1.5	2.3	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|297526160|ref|YP_003668184.1|	-	0.00092	19.5	13.1	0.099	13.0	1.4	2.6	2	1	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_20	PF14691.1	gi|297526160|ref|YP_003668184.1|	-	0.0076	15.8	3.7	0.97	9.0	0.1	2.1	2	0	0	2	2	2	2	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
Fer4_11	PF13247.1	gi|297526160|ref|YP_003668184.1|	-	0.038	13.8	4.6	0.27	11.1	3.0	2.0	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Complex1_49kDa	PF00346.14	gi|297526161|ref|YP_003668185.1|	-	3.6e-46	157.3	0.0	4.9e-40	137.2	0.0	2.1	1	1	1	2	2	2	2	Respiratory-chain	NADH	dehydrogenase,	49	Kd	subunit
NiFeSe_Hases	PF00374.14	gi|297526161|ref|YP_003668185.1|	-	0.0037	16.1	0.0	0.0082	14.9	0.0	1.5	2	0	0	2	2	2	1	Nickel-dependent	hydrogenase
Complex1_30kDa	PF00329.14	gi|297526162|ref|YP_003668186.1|	-	4.2e-29	100.8	0.0	6.6e-29	100.1	0.0	1.3	1	0	0	1	1	1	1	Respiratory-chain	NADH	dehydrogenase,	30	Kd	subunit
Oxidored_q6	PF01058.17	gi|297526163|ref|YP_003668187.1|	-	1.8e-16	59.9	0.0	2.4e-16	59.5	0.0	1.2	1	0	0	1	1	1	1	NADH	ubiquinone	oxidoreductase,	20	Kd	subunit
DUF35_N	PF12172.3	gi|297526163|ref|YP_003668187.1|	-	0.011	15.6	1.7	1.3	9.0	0.0	2.8	2	1	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Oxidored_q1	PF00361.15	gi|297526164|ref|YP_003668188.1|	-	7.1e-48	163.2	15.0	7.1e-48	163.2	10.4	2.8	3	1	0	3	3	3	1	NADH-Ubiquinone/plastoquinone	(complex	I),	various	chains
TraE	PF05309.6	gi|297526164|ref|YP_003668188.1|	-	0.67	9.0	2.4	2.8	7.0	0.2	2.3	2	0	0	2	2	2	0	TraE	protein
Nop10p	PF04135.7	gi|297526165|ref|YP_003668189.1|	-	1.3e-23	82.4	0.8	1.5e-23	82.2	0.5	1.1	1	0	0	1	1	1	1	Nucleolar	RNA-binding	protein,	Nop10p	family
DUF1272	PF06906.6	gi|297526165|ref|YP_003668189.1|	-	0.014	15.1	1.6	0.019	14.7	1.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1272)
DZR	PF12773.2	gi|297526165|ref|YP_003668189.1|	-	0.05	13.4	0.3	0.065	13.0	0.2	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|297526165|ref|YP_003668189.1|	-	0.052	12.7	3.0	0.16	11.1	2.1	1.8	1	1	0	1	1	1	0	zinc-ribbon	domain
Zn_ribbon_recom	PF13408.1	gi|297526165|ref|YP_003668189.1|	-	0.067	13.4	0.2	0.27	11.5	0.1	1.8	1	1	0	1	1	1	0	Recombinase	zinc	beta	ribbon	domain
Fer4	PF00037.22	gi|297526165|ref|YP_003668189.1|	-	0.14	11.8	3.9	4.6	7.0	0.5	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
A2L_zn_ribbon	PF08792.5	gi|297526165|ref|YP_003668189.1|	-	0.14	11.6	1.3	1	8.8	0.0	2.1	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
Ribosomal_L32p	PF01783.18	gi|297526165|ref|YP_003668189.1|	-	0.23	11.6	1.1	0.31	11.2	0.7	1.3	1	0	0	1	1	1	0	Ribosomal	L32p	protein	family
TF_Zn_Ribbon	PF08271.7	gi|297526165|ref|YP_003668189.1|	-	0.58	9.5	3.3	3	7.2	0.3	2.1	1	1	1	2	2	2	0	TFIIB	zinc-binding
zf-ISL3	PF14690.1	gi|297526165|ref|YP_003668189.1|	-	0.98	9.5	5.5	1.4	9.0	0.5	2.3	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zinc_ribbon_2	PF13240.1	gi|297526165|ref|YP_003668189.1|	-	1.2	8.7	6.1	33	4.1	4.3	2.2	1	1	0	1	1	1	0	zinc-ribbon	domain
EIF_2_alpha	PF07541.7	gi|297526166|ref|YP_003668190.1|	-	5e-27	93.8	0.0	1.6e-26	92.2	0.0	1.8	2	0	0	2	2	2	1	Eukaryotic	translation	initiation	factor	2	alpha	subunit
S1	PF00575.18	gi|297526166|ref|YP_003668190.1|	-	4.6e-15	55.4	0.4	1.8e-14	53.5	0.1	2.0	2	0	0	2	2	2	1	S1	RNA	binding	domain
EXOSC1	PF10447.4	gi|297526166|ref|YP_003668190.1|	-	0.04	13.8	0.1	27	4.7	0.2	3.1	3	0	0	3	3	3	0	Exosome	component	EXOSC1/CSL4
PA_decarbox	PF05870.6	gi|297526166|ref|YP_003668190.1|	-	0.063	12.7	1.3	0.11	11.9	0.9	1.4	1	0	0	1	1	1	0	Phenolic	acid	decarboxylase	(PAD)
AsnC_trans_reg	PF01037.16	gi|297526166|ref|YP_003668190.1|	-	0.078	12.6	0.0	0.22	11.2	0.0	1.8	1	0	0	1	1	1	0	AsnC	family
S1_2	PF13509.1	gi|297526166|ref|YP_003668190.1|	-	0.092	12.6	0.0	1.1	9.2	0.0	2.3	2	0	0	2	2	2	0	S1	domain
Microcin	PF03526.8	gi|297526167|ref|YP_003668191.1|	-	0.022	14.3	2.1	0.041	13.4	0.2	2.5	2	0	0	2	2	2	0	Colicin	E1	(microcin)	immunity	protein
Abhydrolase_9_N	PF15420.1	gi|297526168|ref|YP_003668192.1|	-	0.074	12.7	1.7	0.091	12.5	1.2	1.0	1	0	0	1	1	1	0	Alpha/beta-hydrolase	family	N-terminus
DUF2207	PF09972.4	gi|297526168|ref|YP_003668192.1|	-	0.93	7.9	4.6	1.1	7.7	3.2	1.1	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2207)
SPC12	PF06645.8	gi|297526168|ref|YP_003668192.1|	-	1.8	8.3	7.2	0.72	9.7	0.5	2.6	3	0	0	3	3	3	0	Microsomal	signal	peptidase	12	kDa	subunit	(SPC12)
DUF347	PF03988.7	gi|297526168|ref|YP_003668192.1|	-	2.9	7.8	7.8	1.4	8.8	0.1	2.7	3	0	0	3	3	3	0	Repeat	of	Unknown	Function	(DUF347)
DNA_primase_S	PF01896.14	gi|297526170|ref|YP_003668194.1|	-	2.3e-16	59.9	0.3	8e-15	54.9	0.0	2.3	2	0	0	2	2	2	2	Eukaryotic	and	archaeal	DNA	primase	small	subunit
PCNA_N	PF00705.13	gi|297526171|ref|YP_003668195.1|	-	2.8e-14	52.7	0.0	5e-14	51.8	0.0	1.4	1	0	0	1	1	1	1	Proliferating	cell	nuclear	antigen,	N-terminal	domain
PCNA_C	PF02747.10	gi|297526171|ref|YP_003668195.1|	-	2.1e-08	34.1	0.0	3.5e-08	33.4	0.0	1.3	1	0	0	1	1	1	1	Proliferating	cell	nuclear	antigen,	C-terminal	domain
Rad1	PF02144.11	gi|297526171|ref|YP_003668195.1|	-	0.00032	19.5	0.0	0.0019	17.0	0.0	1.8	2	0	0	2	2	2	1	Repair	protein	Rad1/Rec1/Rad17
TFIIS_C	PF01096.13	gi|297526173|ref|YP_003668197.1|	-	2e-20	72.1	8.7	2.3e-19	68.7	2.3	2.2	2	0	0	2	2	2	1	Transcription	factor	S-II	(TFIIS)
Zn_Tnp_IS1595	PF12760.2	gi|297526173|ref|YP_003668197.1|	-	6.9e-06	25.7	4.3	0.00026	20.7	1.6	2.3	2	0	0	2	2	2	1	Transposase	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|297526173|ref|YP_003668197.1|	-	6.7e-05	22.3	3.4	0.46	10.1	0.0	3.2	3	0	0	3	3	3	2	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|297526173|ref|YP_003668197.1|	-	8.5e-05	22.1	3.6	0.43	10.3	0.0	3.2	3	0	0	3	3	3	2	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|297526173|ref|YP_003668197.1|	-	8.8e-05	21.5	5.6	0.088	12.0	0.1	3.2	3	0	0	3	3	3	2	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|297526173|ref|YP_003668197.1|	-	0.00036	19.8	7.8	0.28	10.5	0.1	3.5	3	1	1	4	4	4	2	TFIIB	zinc-binding
UPF0547	PF10571.4	gi|297526173|ref|YP_003668197.1|	-	0.00046	19.8	5.4	0.2	11.3	0.0	3.2	3	0	0	3	3	3	1	Uncharacterised	protein	family	UPF0547
DUF2387	PF09526.5	gi|297526173|ref|YP_003668197.1|	-	0.0011	18.8	3.4	0.25	11.2	0.1	2.4	2	0	0	2	2	2	2	Probable	metal-binding	protein	(DUF2387)
zinc_ribbon_2	PF13240.1	gi|297526173|ref|YP_003668197.1|	-	0.0017	17.7	7.4	0.52	9.8	0.1	3.2	3	0	0	3	3	3	2	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|297526173|ref|YP_003668197.1|	-	0.0021	17.6	6.7	0.025	14.2	1.0	2.8	1	1	1	2	2	2	1	Putative	transposase	DNA-binding	domain
DZR	PF12773.2	gi|297526173|ref|YP_003668197.1|	-	0.0026	17.5	4.0	0.36	10.6	2.8	2.7	1	1	0	1	1	1	1	Double	zinc	ribbon
Rubredoxin	PF00301.15	gi|297526173|ref|YP_003668197.1|	-	0.0044	16.8	6.6	4.5	7.2	1.1	3.3	3	0	0	3	3	3	0	Rubredoxin
Elf1	PF05129.8	gi|297526173|ref|YP_003668197.1|	-	0.0075	15.9	3.0	0.47	10.1	0.3	2.8	1	1	0	2	2	2	1	Transcription	elongation	factor	Elf1	like
IBR	PF01485.16	gi|297526173|ref|YP_003668197.1|	-	0.018	14.9	1.7	0.27	11.1	0.3	2.4	2	1	0	2	2	2	0	IBR	domain
Terminase_GpA	PF05876.7	gi|297526173|ref|YP_003668197.1|	-	0.023	13.0	5.1	0.095	11.0	1.9	2.0	1	1	0	2	2	2	0	Phage	terminase	large	subunit	(GpA)
RNA_POL_M_15KD	PF02150.11	gi|297526173|ref|YP_003668197.1|	-	0.029	14.0	6.1	3.7	7.3	0.1	3.2	3	0	0	3	3	3	0	RNA	polymerases	M/15	Kd	subunit
zf-CSL	PF05207.8	gi|297526173|ref|YP_003668197.1|	-	0.03	13.8	10.1	0.043	13.3	1.7	2.9	1	1	0	2	2	2	0	CSL	zinc	finger
Ribosomal_L37e	PF01907.14	gi|297526173|ref|YP_003668197.1|	-	0.041	13.6	4.5	19	5.1	0.0	3.2	3	0	0	3	3	3	0	Ribosomal	protein	L37e
zf-Mss51	PF13824.1	gi|297526173|ref|YP_003668197.1|	-	0.072	12.9	2.5	6	6.8	0.0	3.0	2	1	1	3	3	3	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
Lar_restr_allev	PF14354.1	gi|297526173|ref|YP_003668197.1|	-	0.093	13.0	6.9	2.4	8.5	0.1	2.8	1	1	1	2	2	2	0	Restriction	alleviation	protein	Lar
zf-ISL3	PF14690.1	gi|297526173|ref|YP_003668197.1|	-	0.12	12.4	7.6	0.62	10.1	0.1	3.3	3	1	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
HypA	PF01155.14	gi|297526173|ref|YP_003668197.1|	-	0.12	12.0	4.3	1.6	8.4	2.9	2.2	1	1	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
Zn-ribbon_8	PF09723.5	gi|297526173|ref|YP_003668197.1|	-	0.18	11.8	9.5	2.8	7.9	0.0	3.3	3	0	0	3	3	3	0	Zinc	ribbon	domain
YhfH	PF14149.1	gi|297526173|ref|YP_003668197.1|	-	0.18	11.5	1.5	28	4.6	0.0	3.2	3	0	0	3	3	3	0	YhfH-like	protein
DUF2082	PF09855.4	gi|297526173|ref|YP_003668197.1|	-	0.19	11.5	9.5	0.53	10.1	0.2	3.2	3	0	0	3	3	3	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
FdhE	PF04216.7	gi|297526173|ref|YP_003668197.1|	-	0.24	11.0	2.0	0.2	11.3	0.3	1.6	2	0	0	2	2	2	0	Protein	involved	in	formate	dehydrogenase	formation
Baculo_ME53	PF06061.6	gi|297526173|ref|YP_003668197.1|	-	0.26	10.2	3.0	3.8	6.3	0.1	2.3	2	1	0	2	2	2	0	Baculoviridae	ME53
DNA_RNApol_7kD	PF03604.8	gi|297526173|ref|YP_003668197.1|	-	0.31	10.5	10.6	7	6.2	0.1	3.3	3	0	0	3	3	3	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Mu-like_Com	PF10122.4	gi|297526173|ref|YP_003668197.1|	-	0.42	9.7	4.4	5.3	6.1	0.1	3.1	3	0	0	3	3	3	0	Mu-like	prophage	protein	Com
Nudix_N_2	PF14803.1	gi|297526173|ref|YP_003668197.1|	-	0.47	10.1	6.2	22	4.8	0.1	3.6	4	0	0	4	4	4	0	Nudix	N-terminal
DUF2688	PF10892.3	gi|297526173|ref|YP_003668197.1|	-	0.51	10.0	5.3	26	4.5	0.1	3.1	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2688)
Sgf11	PF08209.6	gi|297526173|ref|YP_003668197.1|	-	0.56	9.5	4.8	16	4.8	0.0	3.0	3	0	0	3	3	3	0	Sgf11	(transcriptional	regulation	protein)
Baculo_LEF5_C	PF11792.3	gi|297526173|ref|YP_003668197.1|	-	0.7	9.3	4.8	0.34	10.3	0.3	2.4	2	1	0	2	2	2	0	Baculoviridae	late	expression	factor	5	C-terminal	domain
zf-FPG_IleRS	PF06827.9	gi|297526173|ref|YP_003668197.1|	-	0.76	9.4	8.8	11	5.7	0.4	3.4	3	0	0	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
C1_3	PF07649.7	gi|297526173|ref|YP_003668197.1|	-	0.81	9.7	6.6	6.8	6.8	0.1	2.9	3	0	0	3	3	3	0	C1-like	domain
zf-ZPR1	PF03367.8	gi|297526173|ref|YP_003668197.1|	-	1	8.4	7.8	2.5	7.2	0.3	2.8	1	1	2	3	3	3	0	ZPR1	zinc-finger	domain
Ribosomal_L44	PF00935.14	gi|297526173|ref|YP_003668197.1|	-	2	8.4	6.3	2.8	8.0	0.5	3.0	3	1	0	3	3	3	0	Ribosomal	protein	L44
DUF3505	PF12013.3	gi|297526173|ref|YP_003668197.1|	-	2.1	8.6	4.6	9	6.5	0.1	2.6	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF3505)
zf-HIT	PF04438.11	gi|297526173|ref|YP_003668197.1|	-	7.9	6.2	12.9	7.1	6.3	0.3	3.0	3	0	0	3	3	3	0	HIT	zinc	finger
DM	PF00751.13	gi|297526173|ref|YP_003668197.1|	-	8.2	6.0	7.3	11	5.6	0.0	2.9	3	0	0	3	3	3	0	DM	DNA	binding	domain
RNA_pol_L_2	PF13656.1	gi|297526174|ref|YP_003668198.1|	-	3.9e-24	83.8	0.3	4.8e-24	83.5	0.2	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
DUF2067	PF09840.4	gi|297526175|ref|YP_003668199.1|	-	3.2e-25	88.7	0.8	3.8e-25	88.5	0.5	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2067)
ECR1_N	PF14382.1	gi|297526176|ref|YP_003668200.1|	-	1e-10	40.6	0.2	3.6e-10	38.9	0.1	1.9	1	0	0	1	1	1	1	Exosome	complex	exonuclease	RRP4	N-terminal	region
S1	PF00575.18	gi|297526176|ref|YP_003668200.1|	-	5.2e-07	29.6	0.3	1e-05	25.5	0.2	2.3	1	1	0	1	1	1	1	S1	RNA	binding	domain
EXOSC1	PF10447.4	gi|297526176|ref|YP_003668200.1|	-	8.2e-07	28.8	0.1	2.4e-06	27.4	0.1	1.8	1	1	0	1	1	1	1	Exosome	component	EXOSC1/CSL4
DZR	PF12773.2	gi|297526176|ref|YP_003668200.1|	-	7.6e-05	22.4	0.3	0.00012	21.7	0.2	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
Auto_anti-p27	PF06677.7	gi|297526176|ref|YP_003668200.1|	-	7.9e-05	22.3	2.1	0.00013	21.6	1.4	1.3	1	0	0	1	1	1	1	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
Prok-RING_1	PF14446.1	gi|297526176|ref|YP_003668200.1|	-	0.0001	21.9	1.8	0.00017	21.2	1.2	1.3	1	0	0	1	1	1	1	Prokaryotic	RING	finger	family	1
zf-ribbon_3	PF13248.1	gi|297526176|ref|YP_003668200.1|	-	0.00032	19.8	0.9	0.08	12.1	0.1	2.2	2	0	0	2	2	2	2	zinc-ribbon	domain
zf-NADH-PPase	PF09297.6	gi|297526176|ref|YP_003668200.1|	-	0.00044	19.6	0.8	0.00079	18.8	0.6	1.4	1	0	0	1	1	1	1	NADH	pyrophosphatase	zinc	ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|297526176|ref|YP_003668200.1|	-	0.002	17.7	0.4	0.0033	17.0	0.3	1.3	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
zinc_ribbon_2	PF13240.1	gi|297526176|ref|YP_003668200.1|	-	0.0032	16.8	2.1	0.0064	15.9	1.5	1.5	1	1	0	1	1	1	1	zinc-ribbon	domain
RNA_POL_M_15KD	PF02150.11	gi|297526176|ref|YP_003668200.1|	-	0.0051	16.4	1.3	0.0092	15.6	0.9	1.3	1	0	0	1	1	1	1	RNA	polymerases	M/15	Kd	subunit
HypA	PF01155.14	gi|297526176|ref|YP_003668200.1|	-	0.012	15.3	0.6	0.032	13.9	0.4	1.7	1	1	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
A2L_zn_ribbon	PF08792.5	gi|297526176|ref|YP_003668200.1|	-	0.02	14.3	1.3	0.068	12.6	0.9	1.8	1	1	0	1	1	1	0	A2L	zinc	ribbon	domain
ADK_lid	PF05191.9	gi|297526176|ref|YP_003668200.1|	-	0.069	12.8	2.1	1.3	8.7	0.1	2.3	2	0	0	2	2	2	0	Adenylate	kinase,	active	site	lid
Nudix_N_2	PF14803.1	gi|297526176|ref|YP_003668200.1|	-	0.079	12.6	4.5	1.1	9.0	3.1	2.2	1	1	0	1	1	1	0	Nudix	N-terminal
UPF0449	PF15136.1	gi|297526176|ref|YP_003668200.1|	-	0.099	12.8	0.0	0.16	12.2	0.0	1.3	1	0	0	1	1	1	0	Uncharacterised	protein	family	UPF0449
Cys_rich_KTR	PF14205.1	gi|297526176|ref|YP_003668200.1|	-	0.15	11.5	0.9	0.44	10.0	0.0	2.1	2	0	0	2	2	2	0	Cysteine-rich	KTR
zf-C3HC4_3	PF13920.1	gi|297526176|ref|YP_003668200.1|	-	0.16	11.6	1.3	0.25	11.0	0.9	1.2	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
Zn-ribbon_8	PF09723.5	gi|297526176|ref|YP_003668200.1|	-	0.18	11.7	4.0	1.8	8.5	2.8	2.2	1	1	0	1	1	1	0	Zinc	ribbon	domain
zf-RING_5	PF14634.1	gi|297526176|ref|YP_003668200.1|	-	0.19	11.4	1.6	0.34	10.6	1.1	1.4	1	0	0	1	1	1	0	zinc-RING	finger	domain
zf-C3HC4	PF00097.20	gi|297526176|ref|YP_003668200.1|	-	0.24	11.0	1.5	0.4	10.3	1.0	1.3	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
TF_Zn_Ribbon	PF08271.7	gi|297526176|ref|YP_003668200.1|	-	0.42	9.9	4.5	1.5	8.1	3.1	1.9	1	1	0	1	1	1	0	TFIIB	zinc-binding
Methyltransf_26	PF13659.1	gi|297526177|ref|YP_003668201.1|	-	7.8e-08	32.3	0.0	1e-07	32.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|297526177|ref|YP_003668201.1|	-	2.2e-07	30.3	0.0	3.2e-07	29.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.1	gi|297526177|ref|YP_003668201.1|	-	1.5e-06	27.8	0.0	2.1e-06	27.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_9	PF08003.6	gi|297526177|ref|YP_003668201.1|	-	6.8e-05	21.7	0.0	9.2e-05	21.2	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1698)
PrmA	PF06325.8	gi|297526177|ref|YP_003668201.1|	-	9.3e-05	21.6	0.2	0.00012	21.3	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_18	PF12847.2	gi|297526177|ref|YP_003668201.1|	-	0.00013	22.5	0.0	0.00016	22.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|297526177|ref|YP_003668201.1|	-	0.0019	17.6	0.0	0.0026	17.1	0.0	1.2	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
DUF43	PF01861.11	gi|297526177|ref|YP_003668201.1|	-	0.003	16.5	0.0	0.0055	15.7	0.0	1.4	1	1	0	1	1	1	1	Protein	of	unknown	function	DUF43
UPF0020	PF01170.13	gi|297526177|ref|YP_003668201.1|	-	0.0032	17.0	0.0	0.0038	16.8	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_32	PF13679.1	gi|297526177|ref|YP_003668201.1|	-	0.0042	16.7	0.0	0.006	16.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|297526177|ref|YP_003668201.1|	-	0.007	16.8	0.0	0.011	16.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|297526177|ref|YP_003668201.1|	-	0.054	13.8	0.0	0.077	13.3	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
SDH_sah	PF01972.11	gi|297526178|ref|YP_003668202.1|	-	7e-126	418.7	1.6	7.6e-126	418.6	1.1	1.0	1	0	0	1	1	1	1	Serine	dehydrogenase	proteinase
CLP_protease	PF00574.18	gi|297526178|ref|YP_003668202.1|	-	2.2e-08	33.9	0.1	3.1e-07	30.2	0.0	2.0	2	0	0	2	2	2	1	Clp	protease
Peptidase_S49	PF01343.13	gi|297526178|ref|YP_003668202.1|	-	0.00028	20.7	0.0	0.00044	20.0	0.0	1.3	1	0	0	1	1	1	1	Peptidase	family	S49
ECH	PF00378.15	gi|297526178|ref|YP_003668202.1|	-	0.034	13.2	0.1	0.069	12.2	0.1	1.4	1	1	0	1	1	1	0	Enoyl-CoA	hydratase/isomerase	family
Dak1_2	PF13684.1	gi|297526178|ref|YP_003668202.1|	-	0.083	11.8	0.8	2	7.2	0.1	2.1	2	0	0	2	2	2	0	Dihydroxyacetone	kinase	family
Diphthamide_syn	PF01866.12	gi|297526179|ref|YP_003668203.1|	-	3.8e-74	249.6	0.0	4.7e-74	249.3	0.0	1.0	1	0	0	1	1	1	1	Putative	diphthamide	synthesis	protein
Ribosomal_L16	PF00252.13	gi|297526180|ref|YP_003668204.1|	-	2e-39	134.4	0.1	2.2e-39	134.2	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L16p/L10e
UPF0020	PF01170.13	gi|297526181|ref|YP_003668205.1|	-	4.1e-49	166.5	0.0	5.6e-49	166.1	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_26	PF13659.1	gi|297526181|ref|YP_003668205.1|	-	1.4e-20	73.4	0.0	2.4e-20	72.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
THUMP	PF02926.12	gi|297526181|ref|YP_003668205.1|	-	5.5e-15	55.5	0.2	8.9e-15	54.8	0.2	1.5	1	1	0	1	1	1	1	THUMP	domain
MTS	PF05175.9	gi|297526181|ref|YP_003668205.1|	-	5.3e-11	42.1	0.0	8.2e-11	41.5	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.1	gi|297526181|ref|YP_003668205.1|	-	6.1e-09	35.6	0.0	1.4e-08	34.4	0.0	1.6	2	0	0	2	2	2	1	Methyltransferase	domain
N6_Mtase	PF02384.11	gi|297526181|ref|YP_003668205.1|	-	1.8e-05	23.9	0.0	3e-05	23.2	0.0	1.3	1	0	0	1	1	1	1	N-6	DNA	Methylase
Met_10	PF02475.11	gi|297526181|ref|YP_003668205.1|	-	0.00016	21.3	0.0	0.00036	20.1	0.0	1.6	2	0	0	2	2	2	1	Met-10+	like-protein
Methyltransf_18	PF12847.2	gi|297526181|ref|YP_003668205.1|	-	0.00043	20.8	0.0	0.00076	20.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|297526181|ref|YP_003668205.1|	-	0.0033	17.8	0.0	0.015	15.7	0.0	2.2	2	1	0	2	2	2	1	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|297526181|ref|YP_003668205.1|	-	0.0049	16.4	0.0	0.0095	15.4	0.0	1.4	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
N6_N4_Mtase	PF01555.13	gi|297526181|ref|YP_003668205.1|	-	0.0066	15.9	0.1	0.15	11.5	0.0	2.3	2	1	0	2	2	2	1	DNA	methylase
Ubie_methyltran	PF01209.13	gi|297526181|ref|YP_003668205.1|	-	0.11	11.5	0.0	0.17	10.9	0.0	1.2	1	0	0	1	1	1	0	ubiE/COQ5	methyltransferase	family
Cas_DxTHG	PF09455.5	gi|297526182|ref|YP_003668206.1|	-	3e-54	184.6	5.6	3.6e-54	184.3	3.9	1.1	1	0	0	1	1	1	1	CRISPR-associated	(Cas)	DxTHG	family
Cas_APE2256	PF09651.5	gi|297526184|ref|YP_003668208.1|	-	1.5e-26	92.7	0.0	2e-26	92.3	0.0	1.2	1	0	0	1	1	1	1	CRISPR-associated	protein	(Cas_APE2256)
DUF402	PF04167.8	gi|297526185|ref|YP_003668209.1|	-	1.4e-16	60.0	0.6	3.5e-16	58.7	0.4	1.7	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF402)
RNase_E_G	PF10150.4	gi|297526185|ref|YP_003668209.1|	-	1.1e-09	37.9	0.2	1.6e-09	37.3	0.1	1.4	1	0	0	1	1	1	1	Ribonuclease	E/G	family
DUF4261	PF14080.1	gi|297526185|ref|YP_003668209.1|	-	0.046	13.5	0.1	0.39	10.5	0.0	2.5	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF4261)
UPF0147	PF03685.8	gi|297526186|ref|YP_003668210.1|	-	8.5e-38	128.1	3.2	9.4e-38	127.9	2.2	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0147)
UPF0253	PF06786.7	gi|297526186|ref|YP_003668210.1|	-	0.014	15.5	0.2	5.6	7.1	0.0	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0253)
Auto_anti-p27	PF06677.7	gi|297526187|ref|YP_003668211.1|	-	1.2e-13	50.5	0.9	1.8e-13	49.9	0.6	1.3	1	0	0	1	1	1	1	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
KAP_NTPase	PF07693.9	gi|297526187|ref|YP_003668211.1|	-	0.002	17.2	0.1	0.002	17.2	0.0	1.1	1	0	0	1	1	1	1	KAP	family	P-loop	domain
Rieske	PF00355.21	gi|297526187|ref|YP_003668211.1|	-	0.0043	16.5	0.0	0.0055	16.2	0.0	1.2	1	0	0	1	1	1	1	Rieske	[2Fe-2S]	domain
Thymidylate_kin	PF02223.12	gi|297526188|ref|YP_003668212.1|	-	7.4e-42	142.8	0.0	8.5e-42	142.6	0.0	1.0	1	0	0	1	1	1	1	Thymidylate	kinase
AAA_28	PF13521.1	gi|297526188|ref|YP_003668212.1|	-	3.6e-05	23.7	0.0	4.4e-05	23.5	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|297526188|ref|YP_003668212.1|	-	4.5e-05	23.7	0.0	0.00068	19.9	0.0	2.2	1	1	1	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|297526188|ref|YP_003668212.1|	-	4.9e-05	24.1	1.6	0.0002	22.1	1.1	1.9	1	1	0	1	1	1	1	AAA	domain
APS_kinase	PF01583.15	gi|297526188|ref|YP_003668212.1|	-	0.017	14.7	0.0	0.03	13.9	0.0	1.4	1	0	0	1	1	1	0	Adenylylsulphate	kinase
AAA_14	PF13173.1	gi|297526188|ref|YP_003668212.1|	-	0.068	13.0	0.1	0.14	12.0	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
KTI12	PF08433.5	gi|297526188|ref|YP_003668212.1|	-	0.13	11.4	0.0	0.24	10.5	0.0	1.4	1	1	0	1	1	1	0	Chromatin	associated	protein	KTI12
OrfB_Zn_ribbon	PF07282.6	gi|297526189|ref|YP_003668213.1|	-	2.6e-24	84.6	0.1	6e-24	83.4	0.0	1.6	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|297526189|ref|YP_003668213.1|	-	3.6e-13	49.4	2.1	6.1e-13	48.6	1.5	1.3	1	0	0	1	1	1	1	Probable	transposase
DZR	PF12773.2	gi|297526189|ref|YP_003668213.1|	-	0.0014	18.3	0.3	0.0031	17.2	0.2	1.5	1	0	0	1	1	1	1	Double	zinc	ribbon
RNA_POL_M_15KD	PF02150.11	gi|297526189|ref|YP_003668213.1|	-	0.047	13.3	1.1	0.12	12.1	0.7	1.7	1	0	0	1	1	1	0	RNA	polymerases	M/15	Kd	subunit
Baculo_ME53	PF06061.6	gi|297526189|ref|YP_003668213.1|	-	0.099	11.6	1.1	0.26	10.2	0.1	2.1	3	0	0	3	3	3	0	Baculoviridae	ME53
DUF126	PF01989.11	gi|297526190|ref|YP_003668214.1|	-	8.3e-25	86.2	0.1	1.2e-24	85.8	0.1	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF126
7kD_coat	PF02495.12	gi|297526190|ref|YP_003668214.1|	-	0.017	14.5	0.4	0.098	12.1	0.0	2.1	2	0	0	2	2	2	0	7kD	viral	coat	protein
DUF521	PF04412.8	gi|297526191|ref|YP_003668215.1|	-	4.4e-95	318.5	0.0	5e-95	318.4	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF521)
UbiD	PF01977.11	gi|297526192|ref|YP_003668216.1|	-	5e-91	305.1	0.0	5.9e-91	304.9	0.0	1.0	1	0	0	1	1	1	1	3-octaprenyl-4-hydroxybenzoate	carboxy-lyase
Herpes_TK_C	PF08465.5	gi|297526192|ref|YP_003668216.1|	-	0.083	12.4	0.2	0.54	9.8	0.1	2.3	2	0	0	2	2	2	0	Thymidine	kinase	from	Herpesvirus	C-terminal
Linocin_M18	PF04454.7	gi|297526192|ref|YP_003668216.1|	-	0.11	11.4	0.0	0.47	9.2	0.0	1.8	2	0	0	2	2	2	0	Encapsulating	protein	for	peroxidase
MobB	PF03205.9	gi|297526193|ref|YP_003668217.1|	-	0.00013	21.6	0.0	0.00039	20.1	0.0	1.8	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Spermine_synth	PF01564.12	gi|297526193|ref|YP_003668217.1|	-	0.047	12.6	0.0	0.1	11.4	0.0	1.5	2	0	0	2	2	2	0	Spermine/spermidine	synthase
Pyr_redox	PF00070.22	gi|297526194|ref|YP_003668218.1|	-	0.0022	18.3	0.1	0.012	15.9	0.0	2.2	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
UPF0081	PF03652.10	gi|297526194|ref|YP_003668218.1|	-	0.11	12.6	0.1	0.26	11.3	0.0	1.6	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0081)
Pox_A28	PF04584.9	gi|297526194|ref|YP_003668218.1|	-	0.12	12.2	0.2	0.21	11.4	0.1	1.3	1	0	0	1	1	1	0	Poxvirus	A28	family
NAD_binding_8	PF13450.1	gi|297526194|ref|YP_003668218.1|	-	0.13	12.3	0.0	0.28	11.2	0.0	1.5	1	0	0	1	1	1	0	NAD(P)-binding	Rossmann-like	domain
KaiC	PF06745.8	gi|297526195|ref|YP_003668219.1|	-	4e-08	32.6	0.0	5.4e-06	25.6	0.0	2.4	1	1	1	2	2	2	1	KaiC
AAA_25	PF13481.1	gi|297526195|ref|YP_003668219.1|	-	2.2e-06	27.2	0.0	5e-06	26.0	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_24	PF13479.1	gi|297526195|ref|YP_003668219.1|	-	1.7e-05	24.5	0.0	4.7e-05	23.0	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
AAA_19	PF13245.1	gi|297526195|ref|YP_003668219.1|	-	0.0011	18.6	0.0	0.0021	17.7	0.0	1.5	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_14	PF13173.1	gi|297526195|ref|YP_003668219.1|	-	0.0028	17.5	0.0	0.0057	16.5	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|297526195|ref|YP_003668219.1|	-	0.0032	17.1	0.0	0.0043	16.7	0.0	1.2	1	0	0	1	1	1	1	Archaeal	ATPase
AAA_16	PF13191.1	gi|297526195|ref|YP_003668219.1|	-	0.0032	17.4	0.0	0.0045	16.9	0.0	1.2	1	0	0	1	1	1	1	AAA	ATPase	domain
DUF2075	PF09848.4	gi|297526195|ref|YP_003668219.1|	-	0.0097	14.9	0.0	0.12	11.2	0.0	2.0	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
T2SE	PF00437.15	gi|297526195|ref|YP_003668219.1|	-	0.012	14.5	0.0	0.017	14.0	0.0	1.2	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA	PF00004.24	gi|297526195|ref|YP_003668219.1|	-	0.016	15.3	0.0	0.032	14.4	0.0	1.6	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_29	PF13555.1	gi|297526195|ref|YP_003668219.1|	-	0.019	14.4	0.1	0.039	13.4	0.1	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
NACHT	PF05729.7	gi|297526195|ref|YP_003668219.1|	-	0.022	14.4	0.0	0.032	13.9	0.0	1.3	1	0	0	1	1	1	0	NACHT	domain
IstB_IS21	PF01695.12	gi|297526195|ref|YP_003668219.1|	-	0.026	13.9	0.0	0.038	13.3	0.0	1.2	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA_10	PF12846.2	gi|297526195|ref|YP_003668219.1|	-	0.029	13.8	0.1	0.072	12.5	0.0	1.7	1	1	1	2	2	2	0	AAA-like	domain
Rad51	PF08423.6	gi|297526195|ref|YP_003668219.1|	-	0.035	13.0	0.0	0.11	11.3	0.0	1.9	2	1	0	2	2	2	0	Rad51
Bac_DnaA	PF00308.13	gi|297526195|ref|YP_003668219.1|	-	0.057	13.0	0.0	0.078	12.6	0.0	1.2	1	0	0	1	1	1	0	Bacterial	dnaA	protein
ABC_tran	PF00005.22	gi|297526195|ref|YP_003668219.1|	-	0.058	13.6	0.0	0.087	13.1	0.0	1.3	1	0	0	1	1	1	0	ABC	transporter
PEPCK_ATP	PF01293.15	gi|297526195|ref|YP_003668219.1|	-	0.059	11.8	0.0	0.081	11.4	0.0	1.1	1	0	0	1	1	1	0	Phosphoenolpyruvate	carboxykinase
Viral_helicase1	PF01443.13	gi|297526195|ref|YP_003668219.1|	-	0.06	12.8	0.0	0.075	12.5	0.0	1.1	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
AAA_22	PF13401.1	gi|297526195|ref|YP_003668219.1|	-	0.062	13.4	0.0	0.098	12.7	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
DNA_pol3_delta2	PF13177.1	gi|297526195|ref|YP_003668219.1|	-	0.12	12.0	0.0	0.15	11.7	0.0	1.2	1	0	0	1	1	1	0	DNA	polymerase	III,	delta	subunit
AAA_17	PF13207.1	gi|297526195|ref|YP_003668219.1|	-	0.13	13.1	0.1	0.22	12.3	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|297526195|ref|YP_003668219.1|	-	0.13	11.7	0.0	0.2	11.1	0.0	1.2	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
DnaB_C	PF03796.10	gi|297526195|ref|YP_003668219.1|	-	0.14	11.0	0.0	0.18	10.6	0.0	1.2	1	0	0	1	1	1	0	DnaB-like	helicase	C	terminal	domain
AAA_28	PF13521.1	gi|297526195|ref|YP_003668219.1|	-	0.19	11.6	0.4	0.39	10.6	0.2	1.5	1	1	0	1	1	1	0	AAA	domain
DUF46	PF01864.12	gi|297526196|ref|YP_003668220.1|	-	2.2e-31	109.0	3.5	6e-31	107.6	2.4	1.6	1	1	0	1	1	1	1	Putative	integral	membrane	protein	DUF46
CTP_transf_1	PF01148.15	gi|297526196|ref|YP_003668220.1|	-	1.5e-08	34.6	2.7	1.5e-08	34.6	1.9	1.9	1	1	1	2	2	2	1	Cytidylyltransferase	family
Rhomboid	PF01694.17	gi|297526196|ref|YP_003668220.1|	-	0.12	12.4	1.9	0.22	11.5	1.3	1.5	1	1	0	1	1	1	0	Rhomboid	family
PGG	PF13962.1	gi|297526196|ref|YP_003668220.1|	-	0.13	11.8	1.4	1.5	8.4	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function
DUF204	PF02659.10	gi|297526196|ref|YP_003668220.1|	-	0.18	11.9	3.7	3.4	7.8	1.1	2.5	2	1	0	2	2	2	0	Domain	of	unknown	function	DUF
Ribosomal_L44	PF00935.14	gi|297526197|ref|YP_003668221.1|	-	1.8e-27	95.1	11.9	2.8e-27	94.5	8.3	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L44
zf-ISL3	PF14690.1	gi|297526197|ref|YP_003668221.1|	-	0.0017	18.3	4.7	0.058	13.4	0.6	2.6	2	0	0	2	2	2	1	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Yippee-Mis18	PF03226.9	gi|297526197|ref|YP_003668221.1|	-	0.012	15.6	0.2	0.015	15.3	0.1	1.1	1	0	0	1	1	1	0	Yippee	zinc-binding/DNA-binding	/Mis18,	centromere	assembly
Mu-like_Com	PF10122.4	gi|297526197|ref|YP_003668221.1|	-	0.014	14.3	2.6	2.1	7.4	0.1	2.2	2	0	0	2	2	2	0	Mu-like	prophage	protein	Com
RNA_POL_M_15KD	PF02150.11	gi|297526197|ref|YP_003668221.1|	-	0.015	15.0	0.3	0.24	11.0	0.0	2.2	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
zf-FPG_IleRS	PF06827.9	gi|297526197|ref|YP_003668221.1|	-	0.034	13.7	3.9	0.13	11.8	0.2	2.4	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
zinc_ribbon_2	PF13240.1	gi|297526197|ref|YP_003668221.1|	-	0.047	13.1	1.3	4.1	7.0	0.2	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
C1_1	PF00130.17	gi|297526197|ref|YP_003668221.1|	-	0.062	13.0	0.9	0.34	10.6	0.1	2.1	2	0	0	2	2	2	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
zf-ribbon_3	PF13248.1	gi|297526197|ref|YP_003668221.1|	-	0.1	11.8	0.8	9.6	5.5	0.2	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
Elf1	PF05129.8	gi|297526197|ref|YP_003668221.1|	-	0.14	11.8	2.8	4.9	6.9	0.7	2.3	2	0	0	2	2	2	0	Transcription	elongation	factor	Elf1	like
DZR	PF12773.2	gi|297526197|ref|YP_003668221.1|	-	0.21	11.4	3.4	0.86	9.4	2.4	1.8	1	1	0	1	1	1	0	Double	zinc	ribbon
DUF1660	PF07874.6	gi|297526197|ref|YP_003668221.1|	-	0.24	11.7	1.9	0.83	9.9	0.0	2.1	1	1	1	2	2	2	0	Prophage	protein	(DUF1660)
zinc_ribbon_5	PF13719.1	gi|297526197|ref|YP_003668221.1|	-	0.26	10.9	4.5	2.1	8.0	0.3	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|297526197|ref|YP_003668221.1|	-	0.3	10.8	4.5	2.1	8.0	0.2	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
Ribosomal_L33	PF00471.15	gi|297526197|ref|YP_003668221.1|	-	0.33	11.2	10.3	0.51	10.6	0.5	3.1	2	1	1	3	3	3	0	Ribosomal	protein	L33
Rubredoxin	PF00301.15	gi|297526197|ref|YP_003668221.1|	-	0.44	10.4	2.6	2.7	7.9	0.1	2.3	2	0	0	2	2	2	0	Rubredoxin
DM	PF00751.13	gi|297526197|ref|YP_003668221.1|	-	2.2	7.8	6.0	13	5.3	0.5	2.4	2	0	0	2	2	2	0	DM	DNA	binding	domain
Ribosomal_S27e	PF01667.12	gi|297526198|ref|YP_003668222.1|	-	1.2e-18	66.4	1.0	1.3e-18	66.2	0.7	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S27
TF_Zn_Ribbon	PF08271.7	gi|297526198|ref|YP_003668222.1|	-	4.8e-05	22.5	1.9	8.3e-05	21.8	1.3	1.4	1	0	0	1	1	1	1	TFIIB	zinc-binding
A2L_zn_ribbon	PF08792.5	gi|297526198|ref|YP_003668222.1|	-	0.0023	17.3	1.7	0.15	11.5	0.1	2.2	2	0	0	2	2	2	1	A2L	zinc	ribbon	domain
HypA	PF01155.14	gi|297526198|ref|YP_003668222.1|	-	0.015	14.9	0.1	0.018	14.7	0.1	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
DZR	PF12773.2	gi|297526198|ref|YP_003668222.1|	-	0.041	13.7	0.4	0.064	13.0	0.3	1.4	1	1	0	1	1	1	0	Double	zinc	ribbon
zf-Sec23_Sec24	PF04810.10	gi|297526198|ref|YP_003668222.1|	-	0.046	13.2	0.6	1.3	8.6	0.1	2.2	2	0	0	2	2	2	0	Sec23/Sec24	zinc	finger
DUF4206	PF13901.1	gi|297526198|ref|YP_003668222.1|	-	0.048	13.2	0.2	0.059	12.9	0.2	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4206)
zf-BED	PF02892.10	gi|297526198|ref|YP_003668222.1|	-	0.05	13.3	0.3	7.6	6.3	0.0	2.2	2	0	0	2	2	2	0	BED	zinc	finger
DNA_RNApol_7kD	PF03604.8	gi|297526198|ref|YP_003668222.1|	-	0.054	12.9	3.8	0.23	10.9	2.6	2.0	1	1	0	1	1	1	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Lar_restr_allev	PF14354.1	gi|297526198|ref|YP_003668222.1|	-	0.054	13.8	0.7	0.13	12.5	0.5	1.6	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
zf-ribbon_3	PF13248.1	gi|297526198|ref|YP_003668222.1|	-	0.059	12.6	3.9	5.5	6.3	0.2	2.2	1	1	1	2	2	2	0	zinc-ribbon	domain
Auto_anti-p27	PF06677.7	gi|297526198|ref|YP_003668222.1|	-	0.076	12.7	1.2	0.81	9.5	0.1	2.1	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zinc_ribbon_6	PF14599.1	gi|297526198|ref|YP_003668222.1|	-	0.089	12.6	0.2	0.12	12.2	0.1	1.1	1	0	0	1	1	1	0	Zinc-ribbon
zf-UDP	PF14569.1	gi|297526198|ref|YP_003668222.1|	-	0.094	12.4	0.3	0.11	12.2	0.2	1.1	1	0	0	1	1	1	0	Zinc-binding	RING-finger
zinc_ribbon_5	PF13719.1	gi|297526198|ref|YP_003668222.1|	-	0.11	12.1	1.4	3.1	7.4	0.1	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|297526198|ref|YP_003668222.1|	-	0.15	11.7	1.9	3.1	7.5	0.1	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
Rubredoxin	PF00301.15	gi|297526198|ref|YP_003668222.1|	-	0.22	11.4	1.4	7.1	6.5	0.0	2.2	2	0	0	2	2	2	0	Rubredoxin
zinc_ribbon_2	PF13240.1	gi|297526198|ref|YP_003668222.1|	-	0.28	10.7	2.0	0.97	9.0	1.3	1.8	1	1	0	1	1	1	0	zinc-ribbon	domain
Rpr2	PF04032.11	gi|297526198|ref|YP_003668222.1|	-	0.3	10.9	2.2	6.2	6.7	0.1	2.1	1	1	1	2	2	2	0	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
ADK_lid	PF05191.9	gi|297526198|ref|YP_003668222.1|	-	0.56	9.9	2.5	2.3	7.9	1.7	1.9	1	1	0	1	1	1	0	Adenylate	kinase,	active	site	lid
zf-C2H2_3	PF13878.1	gi|297526198|ref|YP_003668222.1|	-	0.89	9.1	2.6	4.6	6.8	0.1	2.1	1	1	1	2	2	2	0	zinc-finger	of	acetyl-transferase	ESCO
zf-ISL3	PF14690.1	gi|297526198|ref|YP_003668222.1|	-	0.92	9.5	3.4	4.9	7.2	0.1	2.5	3	0	0	3	3	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-trcl	PF13451.1	gi|297526198|ref|YP_003668222.1|	-	0.94	9.1	4.8	2.2	7.9	0.2	2.1	1	1	1	2	2	2	0	Probable	zinc-binding	domain
Desulfoferrod_N	PF06397.7	gi|297526198|ref|YP_003668222.1|	-	1.1	8.7	5.0	3.7	7.0	0.2	2.2	2	0	0	2	2	2	0	Desulfoferrodoxin,	N-terminal	domain
zf-CCHC_6	PF15288.1	gi|297526198|ref|YP_003668222.1|	-	1.2	8.8	4.1	18	5.0	0.1	2.7	3	0	0	3	3	3	0	Zinc	knuckle
Prok-RING_1	PF14446.1	gi|297526198|ref|YP_003668222.1|	-	4.9	6.9	6.1	23	4.8	0.3	2.0	1	1	0	2	2	2	0	Prokaryotic	RING	finger	family	1
Peptidase_M50B	PF13398.1	gi|297526201|ref|YP_003668225.1|	-	3.5	6.9	15.9	4.2	6.7	11.0	1.2	1	0	0	1	1	1	0	Peptidase	M50B-like
adh_short_C2	PF13561.1	gi|297526202|ref|YP_003668226.1|	-	1.4e-31	110.1	0.0	1.8e-31	109.7	0.0	1.0	1	0	0	1	1	1	1	Enoyl-(Acyl	carrier	protein)	reductase
adh_short	PF00106.20	gi|297526202|ref|YP_003668226.1|	-	3.9e-15	56.1	0.0	6e-15	55.5	0.0	1.3	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|297526202|ref|YP_003668226.1|	-	2.7e-07	30.4	0.0	4.6e-07	29.6	0.0	1.3	1	0	0	1	1	1	1	KR	domain
3HCDH_N	PF02737.13	gi|297526202|ref|YP_003668226.1|	-	0.00031	20.4	0.1	0.00082	19.0	0.0	1.7	2	1	1	3	3	3	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
DUF1776	PF08643.5	gi|297526202|ref|YP_003668226.1|	-	0.0053	15.9	0.0	0.0074	15.4	0.0	1.1	1	0	0	1	1	1	1	Fungal	family	of	unknown	function	(DUF1776)
Shikimate_DH	PF01488.15	gi|297526202|ref|YP_003668226.1|	-	0.013	15.6	0.0	0.029	14.4	0.0	1.6	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
DFP	PF04127.10	gi|297526202|ref|YP_003668226.1|	-	0.11	12.0	0.1	0.23	11.0	0.0	1.4	1	0	0	1	1	1	0	DNA	/	pantothenate	metabolism	flavoprotein
NfeD	PF01957.13	gi|297526204|ref|YP_003668228.1|	-	1.2e-07	32.0	2.4	1.3e-07	31.8	1.6	1.0	1	0	0	1	1	1	1	NfeD-like	C-terminal,	partner-binding
Exosortase_EpsH	PF09721.5	gi|297526204|ref|YP_003668228.1|	-	7.1	5.7	11.0	8.2	5.5	7.6	1.0	1	0	0	1	1	1	0	Transmembrane	exosortase	(Exosortase_EpsH)
CARDB	PF07705.6	gi|297526206|ref|YP_003668230.1|	-	0.091	12.8	3.6	5.5	7.1	0.0	3.1	2	1	1	3	3	3	0	CARDB
Peptidase_S24	PF00717.18	gi|297526207|ref|YP_003668231.1|	-	9.5e-05	21.9	0.9	0.00026	20.5	0.1	2.2	2	0	0	2	2	2	1	Peptidase	S24-like
Med23	PF11573.3	gi|297526208|ref|YP_003668232.1|	-	0.16	9.2	0.1	0.21	8.9	0.1	1.0	1	0	0	1	1	1	0	Mediator	complex	subunit	23
HhH-GPD	PF00730.20	gi|297526210|ref|YP_003668234.1|	-	0.12	12.6	0.0	0.21	11.8	0.0	1.5	1	1	0	1	1	1	0	HhH-GPD	superfamily	base	excision	DNA	repair	protein
DUF328	PF03883.9	gi|297526211|ref|YP_003668235.1|	-	0.028	13.6	0.0	0.047	12.9	0.0	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF328)
DUF524	PF04411.7	gi|297526213|ref|YP_003668237.1|	-	0.00065	19.5	0.0	0.0017	18.2	0.0	1.8	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF524)
Mrr_cat	PF04471.7	gi|297526213|ref|YP_003668237.1|	-	0.009	15.8	0.0	0.018	14.8	0.0	1.5	1	0	0	1	1	1	1	Restriction	endonuclease
AAA_5	PF07728.9	gi|297526214|ref|YP_003668238.1|	-	3.6e-17	62.3	0.0	1e-16	60.9	0.0	1.8	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA	PF00004.24	gi|297526214|ref|YP_003668238.1|	-	2e-08	34.4	0.0	9.7e-08	32.2	0.0	2.2	2	0	0	2	2	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.1	gi|297526214|ref|YP_003668238.1|	-	7.7e-07	29.3	0.0	8.9e-06	25.8	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|297526214|ref|YP_003668238.1|	-	1.8e-06	28.7	3.9	2.9e-06	28.0	0.1	3.2	2	2	0	2	2	2	1	AAA	domain
AAA_33	PF13671.1	gi|297526214|ref|YP_003668238.1|	-	5.1e-05	23.1	0.2	0.00017	21.4	0.0	1.9	2	0	0	2	2	2	1	AAA	domain
RuvB_N	PF05496.7	gi|297526214|ref|YP_003668238.1|	-	8.5e-05	21.7	0.0	0.0012	17.9	0.0	2.2	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_3	PF07726.6	gi|297526214|ref|YP_003668238.1|	-	0.0008	19.0	0.0	0.25	10.9	0.0	3.0	2	1	1	3	3	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_18	PF13238.1	gi|297526214|ref|YP_003668238.1|	-	0.00081	19.6	0.4	0.0066	16.7	0.0	2.7	3	1	0	3	3	2	1	AAA	domain
AAA_16	PF13191.1	gi|297526214|ref|YP_003668238.1|	-	0.0011	19.0	0.0	0.0028	17.6	0.0	1.7	1	0	0	1	1	1	1	AAA	ATPase	domain
DUF87	PF01935.12	gi|297526214|ref|YP_003668238.1|	-	0.0015	18.4	6.1	0.55	10.0	0.3	3.2	3	0	0	3	3	3	2	Domain	of	unknown	function	DUF87
Mg_chelatase	PF01078.16	gi|297526214|ref|YP_003668238.1|	-	0.0017	17.5	0.0	0.0041	16.3	0.0	1.6	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
IstB_IS21	PF01695.12	gi|297526214|ref|YP_003668238.1|	-	0.0018	17.7	0.0	0.0036	16.7	0.0	1.5	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
PPV_E1_C	PF00519.12	gi|297526214|ref|YP_003668238.1|	-	0.0021	16.7	0.0	0.0051	15.4	0.0	1.6	1	0	0	1	1	1	1	Papillomavirus	helicase
RNA_helicase	PF00910.17	gi|297526214|ref|YP_003668238.1|	-	0.0022	18.1	0.0	0.014	15.5	0.0	2.4	1	0	0	1	1	1	1	RNA	helicase
AAA_14	PF13173.1	gi|297526214|ref|YP_003668238.1|	-	0.0036	17.1	0.6	0.078	12.8	0.1	3.3	2	1	0	2	2	2	1	AAA	domain
ABC_tran	PF00005.22	gi|297526214|ref|YP_003668238.1|	-	0.0044	17.3	1.1	0.015	15.5	0.0	2.4	3	1	0	3	3	2	1	ABC	transporter
6PF2K	PF01591.13	gi|297526214|ref|YP_003668238.1|	-	0.0069	15.4	0.3	0.026	13.6	0.0	2.0	2	0	0	2	2	2	1	6-phosphofructo-2-kinase
AAA_25	PF13481.1	gi|297526214|ref|YP_003668238.1|	-	0.0069	15.8	0.0	0.016	14.5	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
PIF1	PF05970.9	gi|297526214|ref|YP_003668238.1|	-	0.0073	15.2	0.0	0.016	14.1	0.0	1.5	1	0	0	1	1	1	1	PIF1-like	helicase
AAA_28	PF13521.1	gi|297526214|ref|YP_003668238.1|	-	0.013	15.4	0.1	0.034	14.0	0.0	1.8	2	0	0	2	2	1	0	AAA	domain
TIP49	PF06068.8	gi|297526214|ref|YP_003668238.1|	-	0.018	13.7	0.4	0.25	10.0	0.0	2.6	3	0	0	3	3	3	0	TIP49	C-terminus
KaiC	PF06745.8	gi|297526214|ref|YP_003668238.1|	-	0.019	14.0	0.0	0.072	12.2	0.0	1.9	1	0	0	1	1	1	0	KaiC
AAA_19	PF13245.1	gi|297526214|ref|YP_003668238.1|	-	0.021	14.5	0.0	0.044	13.5	0.0	1.4	1	0	0	1	1	1	0	Part	of	AAA	domain
Zeta_toxin	PF06414.7	gi|297526214|ref|YP_003668238.1|	-	0.031	13.3	0.0	0.089	11.8	0.0	1.7	1	0	0	1	1	1	0	Zeta	toxin
Sigma54_activ_2	PF14532.1	gi|297526214|ref|YP_003668238.1|	-	0.046	13.7	0.0	0.27	11.2	0.0	2.2	2	0	0	2	2	2	0	Sigma-54	interaction	domain
ATP-synt_ab	PF00006.20	gi|297526214|ref|YP_003668238.1|	-	0.064	12.7	0.0	0.28	10.6	0.0	2.0	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
PhoH	PF02562.11	gi|297526214|ref|YP_003668238.1|	-	0.091	11.9	0.0	0.31	10.2	0.0	1.8	2	0	0	2	2	2	0	PhoH-like	protein
AAA_11	PF13086.1	gi|297526214|ref|YP_003668238.1|	-	0.15	11.5	0.7	4.1	6.9	0.0	2.8	2	1	0	2	2	2	0	AAA	domain
AAA_30	PF13604.1	gi|297526214|ref|YP_003668238.1|	-	0.24	10.9	0.1	0.62	9.6	0.0	1.7	2	0	0	2	2	1	0	AAA	domain
AAA_24	PF13479.1	gi|297526214|ref|YP_003668238.1|	-	0.24	10.9	1.5	2.2	7.8	0.1	2.7	3	0	0	3	3	2	0	AAA	domain
DUF499	PF04465.7	gi|297526216|ref|YP_003668240.1|	-	0	1246.4	51.4	0	1246.1	35.6	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF499)
DUF1156	PF06634.7	gi|297526217|ref|YP_003668241.1|	-	2.9e-15	55.7	0.1	8.5e-15	54.2	0.0	1.8	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1156)
Methyltransf_26	PF13659.1	gi|297526217|ref|YP_003668241.1|	-	2.7e-08	33.8	0.0	0.0055	16.7	0.0	2.4	2	0	0	2	2	2	2	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|297526217|ref|YP_003668241.1|	-	2.2e-07	30.4	0.0	0.003	16.9	0.0	2.5	2	0	0	2	2	2	2	Conserved	hypothetical	protein	95
UPF0020	PF01170.13	gi|297526217|ref|YP_003668241.1|	-	0.00028	20.5	0.0	0.53	9.8	0.0	2.3	2	0	0	2	2	2	2	Putative	RNA	methylase	family	UPF0020
N6_N4_Mtase	PF01555.13	gi|297526217|ref|YP_003668241.1|	-	0.036	13.5	0.0	0.036	13.5	0.0	3.2	4	0	0	4	4	4	0	DNA	methylase
zf-BED	PF02892.10	gi|297526217|ref|YP_003668241.1|	-	0.14	11.9	0.2	0.32	10.7	0.1	1.5	1	0	0	1	1	1	0	BED	zinc	finger
AAA_11	PF13086.1	gi|297526218|ref|YP_003668242.1|	-	1.4e-05	24.8	0.0	0.0087	15.6	0.0	2.3	1	1	1	2	2	2	2	AAA	domain
AAA_12	PF13087.1	gi|297526218|ref|YP_003668242.1|	-	7.3e-05	22.2	0.0	0.00063	19.1	0.0	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|297526218|ref|YP_003668242.1|	-	0.016	14.9	0.1	0.037	13.7	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
DEAD	PF00270.24	gi|297526218|ref|YP_003668242.1|	-	0.035	13.6	0.0	0.08	12.4	0.0	1.6	1	0	0	1	1	1	0	DEAD/DEAH	box	helicase
AAA_30	PF13604.1	gi|297526218|ref|YP_003668242.1|	-	0.13	11.8	0.0	0.88	9.1	0.0	2.1	2	1	0	2	2	2	0	AAA	domain
PDDEXK_1	PF12705.2	gi|297526219|ref|YP_003668243.1|	-	7.2e-07	28.8	0.9	1.7e-06	27.5	0.1	2.0	2	1	0	2	2	2	1	PD-(D/E)XK	nuclease	superfamily
zinc_ribbon_4	PF13717.1	gi|297526222|ref|YP_003668246.1|	-	0.00084	18.9	0.3	1	9.1	0.0	2.4	2	0	0	2	2	2	2	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|297526222|ref|YP_003668246.1|	-	0.00097	18.6	0.3	1.2	8.8	0.0	2.4	2	0	0	2	2	2	2	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|297526222|ref|YP_003668246.1|	-	0.0036	16.4	1.1	0.11	11.7	0.0	2.2	2	0	0	2	2	2	1	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.2	gi|297526222|ref|YP_003668246.1|	-	0.01	15.5	2.8	1.7	8.5	2.7	2.1	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
CpXC	PF14353.1	gi|297526222|ref|YP_003668246.1|	-	0.013	15.4	0.6	0.17	11.8	0.4	2.0	1	1	0	1	1	1	0	CpXC	protein
zinc_ribbon_2	PF13240.1	gi|297526222|ref|YP_003668246.1|	-	0.027	13.9	4.2	0.47	10.0	0.6	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
PhnA_Zn_Ribbon	PF08274.7	gi|297526222|ref|YP_003668246.1|	-	0.047	13.4	1.1	1.9	8.3	0.1	2.2	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
zf-TFIIB	PF13453.1	gi|297526222|ref|YP_003668246.1|	-	0.053	12.7	1.6	0.15	11.2	1.1	1.7	1	1	0	1	1	1	0	Transcription	factor	zinc-finger
Lar_restr_allev	PF14354.1	gi|297526222|ref|YP_003668246.1|	-	0.073	13.3	0.9	0.1	12.8	0.6	1.3	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
zf-BED	PF02892.10	gi|297526222|ref|YP_003668246.1|	-	0.074	12.8	1.4	3.3	7.5	0.1	2.2	2	0	0	2	2	2	0	BED	zinc	finger
zf-H2C2_2	PF13465.1	gi|297526222|ref|YP_003668246.1|	-	0.077	13.3	5.5	3.1	8.2	0.8	2.4	2	0	0	2	2	2	0	Zinc-finger	double	domain
Zn-ribbon_8	PF09723.5	gi|297526222|ref|YP_003668246.1|	-	0.086	12.8	0.2	5.4	7.0	0.0	2.3	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-ISL3	PF14690.1	gi|297526222|ref|YP_003668246.1|	-	0.09	12.8	3.3	2.7	8.0	0.0	2.3	2	1	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-Sec23_Sec24	PF04810.10	gi|297526222|ref|YP_003668246.1|	-	0.093	12.3	0.7	1.9	8.1	0.1	2.1	2	0	0	2	2	2	0	Sec23/Sec24	zinc	finger
HypA	PF01155.14	gi|297526222|ref|YP_003668246.1|	-	0.11	12.2	0.1	0.14	11.8	0.1	1.2	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zf-Di19	PF05605.7	gi|297526222|ref|YP_003668246.1|	-	0.21	11.7	1.8	0.59	10.2	1.3	1.8	1	1	0	1	1	1	0	Drought	induced	19	protein	(Di19),	zinc-binding
UPF0547	PF10571.4	gi|297526222|ref|YP_003668246.1|	-	0.23	11.1	0.6	0.23	11.1	0.4	2.1	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zf-C2HC_2	PF13913.1	gi|297526222|ref|YP_003668246.1|	-	0.27	10.9	4.3	1.9	8.2	0.3	2.3	2	0	0	2	2	2	0	zinc-finger	of	a	C2HC-type
Cys_rich_CPXG	PF14255.1	gi|297526222|ref|YP_003668246.1|	-	0.35	10.7	1.6	0.99	9.2	0.2	2.0	2	0	0	2	2	2	0	Cysteine-rich	CPXCG
zf-C2H2_4	PF13894.1	gi|297526222|ref|YP_003668246.1|	-	0.63	10.5	5.1	5.3	7.6	0.2	2.2	1	1	1	2	2	2	0	C2H2-type	zinc	finger
DUF4065	PF13274.1	gi|297526223|ref|YP_003668247.1|	-	2.8e-11	44.0	0.4	4.3e-11	43.4	0.3	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4065)
Mad3_BUB1_I	PF08311.7	gi|297526225|ref|YP_003668249.1|	-	0.062	13.0	0.0	0.11	12.3	0.0	1.5	1	0	0	1	1	1	0	Mad3/BUB1	homology	region	1
N6_N4_Mtase	PF01555.13	gi|297526226|ref|YP_003668250.1|	-	9.6e-27	93.9	0.2	3.1e-16	59.5	0.0	2.2	2	0	0	2	2	2	2	DNA	methylase
Methyltransf_26	PF13659.1	gi|297526226|ref|YP_003668250.1|	-	2.8e-14	53.1	0.0	4.2e-14	52.5	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|297526226|ref|YP_003668250.1|	-	1.5e-11	44.1	0.2	2.9e-10	40.0	0.1	2.2	1	1	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_31	PF13847.1	gi|297526226|ref|YP_003668250.1|	-	1.8e-05	24.3	0.0	0.0051	16.4	0.0	2.4	1	1	1	2	2	2	2	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|297526226|ref|YP_003668250.1|	-	0.0048	17.3	0.1	9.3	6.8	0.0	3.2	2	1	0	2	2	2	2	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|297526226|ref|YP_003668250.1|	-	0.028	14.1	0.0	0.054	13.2	0.0	1.4	1	1	0	1	1	1	0	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|297526226|ref|YP_003668250.1|	-	0.028	13.9	0.0	0.096	12.2	0.0	1.9	1	1	0	1	1	1	0	RNA	cap	guanine-N2	methyltransferase
Methyltransf_25	PF13649.1	gi|297526226|ref|YP_003668250.1|	-	0.035	14.4	0.0	0.08	13.3	0.0	1.6	1	1	0	1	1	1	0	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|297526226|ref|YP_003668250.1|	-	0.17	12.5	0.0	0.58	10.7	0.0	1.9	2	0	0	2	2	2	0	Methyltransferase	domain
fn3	PF00041.16	gi|297526227|ref|YP_003668251.1|	-	7e-12	45.3	3.0	2.8e-11	43.4	2.1	2.1	1	0	0	1	1	1	1	Fibronectin	type	III	domain
Tissue_fac	PF01108.12	gi|297526227|ref|YP_003668251.1|	-	0.0014	18.3	0.8	0.0038	16.9	0.6	1.6	1	0	0	1	1	1	1	Tissue	factor
TMEM154	PF15102.1	gi|297526227|ref|YP_003668251.1|	-	0.14	11.8	16.1	0.075	12.7	7.4	2.4	2	0	0	2	2	2	0	TMEM154	protein	family
Rifin_STEVOR	PF02009.11	gi|297526227|ref|YP_003668251.1|	-	0.99	8.9	2.6	1.5	8.3	1.8	1.2	1	0	0	1	1	1	0	Rifin/stevor	family
Alpha_GJ	PF03229.8	gi|297526227|ref|YP_003668251.1|	-	5.3	7.3	13.4	16	5.8	9.3	1.8	1	0	0	1	1	1	0	Alphavirus	glycoprotein	J
ABC_ATPase	PF09818.4	gi|297526228|ref|YP_003668252.1|	-	3e-135	451.3	0.0	4.1e-135	450.8	0.0	1.1	1	0	0	1	1	1	1	Predicted	ATPase	of	the	ABC	class
AAA_23	PF13476.1	gi|297526228|ref|YP_003668252.1|	-	0.0066	16.8	0.0	0.013	15.8	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_28	PF13521.1	gi|297526228|ref|YP_003668252.1|	-	0.013	15.5	0.0	0.023	14.6	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_25	PF13481.1	gi|297526228|ref|YP_003668252.1|	-	0.027	13.8	0.0	0.047	13.0	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
DHO_dh	PF01180.16	gi|297526229|ref|YP_003668253.1|	-	1.3e-44	152.3	0.1	1.5e-44	152.1	0.1	1.0	1	0	0	1	1	1	1	Dihydroorotate	dehydrogenase
NMO	PF03060.10	gi|297526229|ref|YP_003668253.1|	-	0.00099	18.3	0.2	0.0018	17.4	0.1	1.4	1	0	0	1	1	1	1	Nitronate	monooxygenase
IMPDH	PF00478.20	gi|297526229|ref|YP_003668253.1|	-	0.022	13.6	0.9	0.066	12.0	0.1	2.0	2	1	1	3	3	3	0	IMP	dehydrogenase	/	GMP	reductase	domain
DUF965	PF06135.7	gi|297526229|ref|YP_003668253.1|	-	0.029	14.4	0.0	0.064	13.3	0.0	1.5	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF965)
DUF881	PF05949.7	gi|297526229|ref|YP_003668253.1|	-	0.15	11.4	0.4	0.66	9.4	0.0	2.2	3	0	0	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF881)
Amidohydro_1	PF01979.15	gi|297526230|ref|YP_003668254.1|	-	9.4e-19	68.2	0.0	1.1e-17	64.6	0.0	2.0	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|297526230|ref|YP_003668254.1|	-	1.8e-13	51.1	0.0	1.3e-12	48.3	0.0	2.0	1	1	0	1	1	1	1	Amidohydrolase
Amidohydro_5	PF13594.1	gi|297526230|ref|YP_003668254.1|	-	2.7e-08	33.5	0.1	6.6e-08	32.2	0.1	1.7	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|297526230|ref|YP_003668254.1|	-	0.032	13.4	0.0	0.78	8.8	0.0	2.2	2	0	0	2	2	2	0	Amidohydrolase	family
DHOase	PF12890.2	gi|297526230|ref|YP_003668254.1|	-	0.11	12.1	0.0	0.19	11.4	0.0	1.4	1	0	0	1	1	1	0	Dihydro-orotase-like
DHODB_Fe-S_bind	PF10418.4	gi|297526231|ref|YP_003668255.1|	-	1.9e-10	40.0	0.2	1.9e-10	40.0	0.2	1.7	2	0	0	2	2	2	1	Iron-sulfur	cluster	binding	domain	of	dihydroorotate	dehydrogenase	B
FAD_binding_6	PF00970.19	gi|297526231|ref|YP_003668255.1|	-	0.00068	19.7	0.0	0.0013	18.8	0.0	1.4	1	0	0	1	1	1	1	Oxidoreductase	FAD-binding	domain
NAD_binding_1	PF00175.16	gi|297526231|ref|YP_003668255.1|	-	0.00072	20.0	0.1	0.0077	16.7	0.1	2.1	1	1	0	1	1	1	1	Oxidoreductase	NAD-binding	domain
PyrI	PF01948.13	gi|297526232|ref|YP_003668256.1|	-	2.1e-37	127.0	4.0	3.7e-37	126.2	2.7	1.4	1	0	0	1	1	1	1	Aspartate	carbamoyltransferase	regulatory	chain,	allosteric	domain
PyrI_C	PF02748.10	gi|297526232|ref|YP_003668256.1|	-	5.8e-19	67.2	0.5	9.4e-19	66.6	0.3	1.3	1	0	0	1	1	1	1	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
OTCace_N	PF02729.16	gi|297526233|ref|YP_003668257.1|	-	5e-41	139.6	0.0	6.8e-41	139.2	0.0	1.2	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
OTCace	PF00185.19	gi|297526233|ref|YP_003668257.1|	-	1.8e-28	99.3	0.0	3e-28	98.6	0.0	1.4	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
Pribosyltran	PF00156.22	gi|297526234|ref|YP_003668258.1|	-	8.4e-16	57.8	0.2	1.6e-15	56.9	0.2	1.4	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.1	gi|297526234|ref|YP_003668258.1|	-	0.00065	18.9	0.0	0.00089	18.5	0.0	1.2	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
Mur_ligase_C	PF02875.16	gi|297526234|ref|YP_003668258.1|	-	0.098	12.7	0.0	0.15	12.1	0.0	1.3	1	0	0	1	1	1	0	Mur	ligase	family,	glutamate	ligase	domain
OMPdecase	PF00215.19	gi|297526235|ref|YP_003668259.1|	-	3.9e-22	78.7	0.0	4.5e-22	78.5	0.0	1.0	1	0	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
CTP_synth_N	PF06418.9	gi|297526236|ref|YP_003668260.1|	-	3.6e-126	419.8	1.1	5.2e-126	419.3	0.8	1.2	1	0	0	1	1	1	1	CTP	synthase	N-terminus
GATase	PF00117.23	gi|297526236|ref|YP_003668260.1|	-	8.2e-42	142.8	0.0	1.6e-41	141.8	0.0	1.5	1	0	0	1	1	1	1	Glutamine	amidotransferase	class-I
Peptidase_C26	PF07722.8	gi|297526236|ref|YP_003668260.1|	-	1.1e-10	41.3	0.0	2.2e-10	40.3	0.0	1.5	1	0	0	1	1	1	1	Peptidase	C26
CbiA	PF01656.18	gi|297526236|ref|YP_003668260.1|	-	1.4e-05	24.5	0.0	2.5e-05	23.7	0.0	1.4	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
GATase_3	PF07685.9	gi|297526236|ref|YP_003668260.1|	-	0.033	13.7	0.0	0.066	12.7	0.0	1.5	1	0	0	1	1	1	0	CobB/CobQ-like	glutamine	amidotransferase	domain
Pribosyltran	PF00156.22	gi|297526237|ref|YP_003668261.1|	-	7e-19	67.7	0.0	9.5e-19	67.3	0.0	1.1	1	0	0	1	1	1	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.1	gi|297526237|ref|YP_003668261.1|	-	0.00078	18.6	0.0	0.0022	17.2	0.0	1.6	2	0	0	2	2	2	1	Uracil	phosphoribosyltransferase
CBS	PF00571.23	gi|297526239|ref|YP_003668263.1|	-	1.9e-12	46.7	2.5	7e-08	32.1	0.0	3.1	3	0	0	3	3	3	3	CBS	domain
OrfB_Zn_ribbon	PF07282.6	gi|297526240|ref|YP_003668264.1|	-	2.4e-19	68.7	0.1	7.1e-19	67.2	0.0	1.8	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
DUF4651	PF15513.1	gi|297526240|ref|YP_003668264.1|	-	0.0043	16.4	0.0	0.014	14.8	0.0	1.8	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4651)
Cys_rich_CPCC	PF14206.1	gi|297526240|ref|YP_003668264.1|	-	0.012	15.1	0.3	0.027	14.0	0.2	1.5	1	0	0	1	1	1	0	Cysteine-rich	CPCC
UPF0547	PF10571.4	gi|297526240|ref|YP_003668264.1|	-	0.03	14.0	2.4	0.75	9.5	0.1	2.4	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zf-Mss51	PF13824.1	gi|297526240|ref|YP_003668264.1|	-	0.073	12.9	0.3	0.2	11.5	0.2	1.8	1	0	0	1	1	1	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
CBS	PF00571.23	gi|297526241|ref|YP_003668265.1|	-	2.8e-47	158.2	15.8	2.3e-12	46.5	0.6	5.2	5	0	0	5	5	5	5	CBS	domain
Acetyltransf_7	PF13508.1	gi|297526241|ref|YP_003668265.1|	-	0.00039	20.5	0.3	4.8	7.4	0.0	3.7	4	0	0	4	4	4	1	Acetyltransferase	(GNAT)	domain
IF3_N	PF05198.11	gi|297526241|ref|YP_003668265.1|	-	0.012	15.5	2.9	2.4	8.1	0.1	3.6	3	0	0	3	3	3	0	Translation	initiation	factor	IF-3,	N-terminal	domain
PRC	PF05239.11	gi|297526241|ref|YP_003668265.1|	-	0.026	14.4	3.7	4.4	7.2	0.2	3.3	2	1	0	2	2	2	0	PRC-barrel	domain
Acetyltransf_4	PF13420.1	gi|297526241|ref|YP_003668265.1|	-	0.028	14.3	0.0	1.1	9.2	0.0	2.8	3	0	0	3	3	3	0	Acetyltransferase	(GNAT)	domain
Thioredoxin_3	PF13192.1	gi|297526241|ref|YP_003668265.1|	-	0.12	12.2	0.5	6.3	6.6	0.0	2.8	2	0	0	2	2	2	0	Thioredoxin	domain
DUF3659	PF12396.3	gi|297526241|ref|YP_003668265.1|	-	0.23	11.1	1.7	22	4.7	0.0	3.1	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3659)
HTH_15	PF12324.3	gi|297526241|ref|YP_003668265.1|	-	0.55	9.9	2.7	1.6	8.3	0.1	2.7	3	0	0	3	3	3	0	Helix-turn-helix	domain	of	alkylmercury	lyase
Cache_3	PF14827.1	gi|297526241|ref|YP_003668265.1|	-	2.6	7.9	4.8	4.6	7.1	0.1	3.5	5	0	0	5	5	5	0	Sensory	domain	of	two-component	sensor	kinase
Translin	PF01997.11	gi|297526242|ref|YP_003668266.1|	-	6.9e-35	120.4	0.0	8.7e-35	120.1	0.0	1.1	1	0	0	1	1	1	1	Translin	family
Dehydratase_SU	PF02287.10	gi|297526242|ref|YP_003668266.1|	-	0.054	13.2	0.0	0.096	12.4	0.0	1.5	1	0	0	1	1	1	0	Dehydratase	small	subunit
TPR_1	PF00515.23	gi|297526242|ref|YP_003668266.1|	-	0.77	9.4	3.1	54	3.6	0.0	3.7	4	0	0	4	4	4	0	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|297526242|ref|YP_003668266.1|	-	3.7	7.5	5.0	10	6.1	0.2	3.5	4	0	0	4	4	4	0	Tetratricopeptide	repeat
DUF4346	PF14251.1	gi|297526243|ref|YP_003668267.1|	-	0.013	15.2	0.0	0.014	15.1	0.0	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4346)
Hemerythrin	PF01814.18	gi|297526244|ref|YP_003668268.1|	-	0.00029	21.0	2.3	0.00047	20.3	1.6	1.4	1	0	0	1	1	1	1	Hemerythrin	HHE	cation	binding	domain
tRNA_m1G_MT	PF01746.16	gi|297526244|ref|YP_003668268.1|	-	0.01	15.4	0.4	0.015	14.8	0.3	1.3	1	0	0	1	1	1	0	tRNA	(Guanine-1)-methyltransferase
zf-NPL4	PF05020.10	gi|297526244|ref|YP_003668268.1|	-	0.44	10.1	3.0	1.2	8.7	1.6	2.0	1	1	1	2	2	2	0	NPL4	family,	putative	zinc	binding	region
DUF2115	PF09888.4	gi|297526244|ref|YP_003668268.1|	-	0.76	9.8	6.4	0.47	10.5	2.2	2.1	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2115)
GIY-YIG	PF01541.19	gi|297526244|ref|YP_003668268.1|	-	5.5	7.4	12.5	1.2	9.5	0.1	2.8	2	1	0	2	2	2	0	GIY-YIG	catalytic	domain
Rep_3	PF01051.16	gi|297526245|ref|YP_003668269.1|	-	0.029	13.9	0.1	0.033	13.7	0.1	1.1	1	0	0	1	1	1	0	Initiator	Replication	protein
BALF1	PF06861.6	gi|297526245|ref|YP_003668269.1|	-	0.039	13.3	0.0	0.046	13.1	0.0	1.2	1	0	0	1	1	1	0	BALF1	protein
HTH_31	PF13560.1	gi|297526246|ref|YP_003668270.1|	-	2.9e-07	30.6	0.0	8.2e-07	29.1	0.0	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_3	PF01381.17	gi|297526246|ref|YP_003668270.1|	-	5.6e-06	26.1	0.0	1.2e-05	25.0	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.2	gi|297526246|ref|YP_003668270.1|	-	4e-05	23.5	0.0	0.00011	22.2	0.0	1.7	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_37	PF13744.1	gi|297526246|ref|YP_003668270.1|	-	0.064	13.0	0.0	0.17	11.6	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
Alpha-amylase	PF00128.19	gi|297526247|ref|YP_003668271.1|	-	1.6e-66	224.8	0.4	2.5e-66	224.2	0.3	1.3	1	0	0	1	1	1	1	Alpha	amylase,	catalytic	domain
Voltage_CLC	PF00654.15	gi|297526248|ref|YP_003668272.1|	-	7.3e-60	202.8	22.8	7.3e-60	202.8	15.8	1.6	1	1	1	2	2	2	2	Voltage	gated	chloride	channel
CBS	PF00571.23	gi|297526248|ref|YP_003668272.1|	-	1.3e-12	47.3	0.2	1.7e-06	27.7	0.0	2.4	2	0	0	2	2	2	2	CBS	domain
PTS_2-RNA	PF01885.11	gi|297526249|ref|YP_003668273.1|	-	1.9e-47	161.0	0.0	2.4e-47	160.6	0.0	1.0	1	0	0	1	1	1	1	RNA	2'-phosphotransferase,	Tpt1	/	KptA	family
Desulfoferrod_N	PF06397.7	gi|297526249|ref|YP_003668273.1|	-	0.021	14.2	0.8	0.04	13.3	0.6	1.5	1	0	0	1	1	1	0	Desulfoferrodoxin,	N-terminal	domain
PARP	PF00644.15	gi|297526249|ref|YP_003668273.1|	-	0.021	14.2	0.0	0.028	13.8	0.0	1.2	1	0	0	1	1	1	0	Poly(ADP-ribose)	polymerase	catalytic	domain
DUF4131	PF13567.1	gi|297526250|ref|YP_003668274.1|	-	5.2	6.4	9.4	0.17	11.2	0.7	2.5	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF4131)
EamA	PF00892.15	gi|297526251|ref|YP_003668275.1|	-	2.1e-30	105.3	31.6	8.8e-20	71.0	8.1	2.1	2	0	0	2	2	2	2	EamA-like	transporter	family
EmrE	PF13536.1	gi|297526251|ref|YP_003668275.1|	-	0.0005	20.2	7.6	0.0005	20.2	5.3	2.9	3	1	0	3	3	3	2	Multidrug	resistance	efflux	transporter
S1FA	PF04689.8	gi|297526251|ref|YP_003668275.1|	-	0.04	13.7	2.8	0.85	9.5	0.0	3.0	3	1	0	3	3	3	0	DNA	binding	protein	S1FA
ParBc	PF02195.13	gi|297526252|ref|YP_003668276.1|	-	6.6e-19	67.8	0.0	1.4e-18	66.7	0.0	1.6	1	0	0	1	1	1	1	ParB-like	nuclease	domain
DUF1015	PF06245.6	gi|297526252|ref|YP_003668276.1|	-	1.4e-08	33.6	0.1	4.7e-05	22.0	0.0	2.7	2	1	1	3	3	3	2	Protein	of	unknown	function	(DUF1015)
SBP_bac_3	PF00497.15	gi|297526252|ref|YP_003668276.1|	-	0.099	11.8	0.0	0.23	10.6	0.0	1.5	1	1	0	1	1	1	0	Bacterial	extracellular	solute-binding	proteins,	family	3
MRP-S33	PF08293.6	gi|297526252|ref|YP_003668276.1|	-	0.12	12.3	0.1	2.5	8.1	0.0	2.2	2	0	0	2	2	2	0	Mitochondrial	ribosomal	subunit	S27
ParBc_2	PF08857.6	gi|297526252|ref|YP_003668276.1|	-	0.13	12.0	0.0	0.25	11.1	0.0	1.5	1	0	0	1	1	1	0	Putative	ParB-like	nuclease
DUF3897	PF13036.1	gi|297526252|ref|YP_003668276.1|	-	0.17	11.4	0.0	0.3	10.7	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3897)
2-Hacid_dh_C	PF02826.14	gi|297526254|ref|YP_003668278.1|	-	4e-71	237.8	0.0	7.4e-71	236.9	0.0	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
2-Hacid_dh	PF00389.25	gi|297526254|ref|YP_003668278.1|	-	3.9e-38	129.9	0.1	4.5e-38	129.7	0.1	1.0	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
NAD_binding_2	PF03446.10	gi|297526254|ref|YP_003668278.1|	-	5.6e-05	23.0	0.2	0.00017	21.5	0.0	1.7	2	0	0	2	2	2	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
TrkA_N	PF02254.13	gi|297526254|ref|YP_003668278.1|	-	0.00013	21.9	1.4	0.27	11.2	0.0	2.5	2	0	0	2	2	2	2	TrkA-N	domain
Nitro_FeMo-Co	PF02579.12	gi|297526254|ref|YP_003668278.1|	-	0.0012	18.8	1.2	4.1	7.5	0.0	3.5	2	1	2	4	4	4	2	Dinitrogenase	iron-molybdenum	cofactor
F420_oxidored	PF03807.12	gi|297526254|ref|YP_003668278.1|	-	0.0028	18.0	0.8	0.055	13.9	0.0	2.5	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
NmrA	PF05368.8	gi|297526254|ref|YP_003668278.1|	-	0.01	15.1	0.1	0.025	13.8	0.1	1.7	1	0	0	1	1	1	0	NmrA-like	family
XdhC_C	PF13478.1	gi|297526254|ref|YP_003668278.1|	-	0.061	13.6	0.0	0.15	12.3	0.0	1.7	1	0	0	1	1	1	0	XdhC	Rossmann	domain
IlvN	PF07991.7	gi|297526254|ref|YP_003668278.1|	-	0.068	12.5	0.2	0.23	10.8	0.0	2.0	2	1	1	3	3	3	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
NAD_Gly3P_dh_N	PF01210.18	gi|297526254|ref|YP_003668278.1|	-	2.5	7.8	5.7	25	4.5	2.1	2.8	2	1	0	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Aminotran_5	PF00266.14	gi|297526255|ref|YP_003668279.1|	-	2.2e-37	128.7	0.0	2.4e-37	128.5	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-V
Aminotran_1_2	PF00155.16	gi|297526255|ref|YP_003668279.1|	-	7.8e-05	21.7	0.0	0.00011	21.2	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Cys_Met_Meta_PP	PF01053.15	gi|297526255|ref|YP_003668279.1|	-	0.0027	16.0	0.0	0.0037	15.6	0.0	1.1	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
GDC-P	PF02347.11	gi|297526255|ref|YP_003668279.1|	-	0.0027	16.4	0.0	0.0037	16.0	0.0	1.2	1	0	0	1	1	1	1	Glycine	cleavage	system	P-protein
Pox_VLTF3	PF04947.9	gi|297526256|ref|YP_003668280.1|	-	0.053	13.0	0.5	0.18	11.2	0.3	1.7	1	1	0	1	1	1	0	Poxvirus	Late	Transcription	Factor	VLTF3	like
UDPG_MGDP_dh_C	PF03720.10	gi|297526257|ref|YP_003668281.1|	-	0.047	13.8	0.1	0.073	13.2	0.0	1.3	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	UDP	binding	domain
zf-CSL	PF05207.8	gi|297526258|ref|YP_003668282.1|	-	0.083	12.4	0.0	0.12	11.9	0.0	1.3	1	0	0	1	1	1	0	CSL	zinc	finger
Prok-RING_4	PF14447.1	gi|297526258|ref|YP_003668282.1|	-	0.11	12.0	0.1	0.21	11.1	0.1	1.5	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	4
C1_3	PF07649.7	gi|297526258|ref|YP_003668282.1|	-	0.26	11.3	1.6	0.44	10.6	0.2	1.8	2	0	0	2	2	2	0	C1-like	domain
zf-H2C2_2	PF13465.1	gi|297526258|ref|YP_003668282.1|	-	0.26	11.6	0.2	0.26	11.6	0.1	1.5	2	0	0	2	2	2	0	Zinc-finger	double	domain
Peptidase_M24	PF00557.19	gi|297526259|ref|YP_003668283.1|	-	5.3e-53	179.6	0.0	6.9e-53	179.3	0.0	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Creatinase_N	PF01321.13	gi|297526259|ref|YP_003668283.1|	-	1.1e-07	32.3	0.0	1.8e-07	31.7	0.0	1.3	1	0	0	1	1	1	1	Creatinase/Prolidase	N-terminal	domain
ATP-cone	PF03477.11	gi|297526259|ref|YP_003668283.1|	-	0.034	14.5	1.5	0.31	11.4	0.1	2.3	2	0	0	2	2	2	0	ATP	cone	domain
Inositol_P	PF00459.20	gi|297526260|ref|YP_003668284.1|	-	4.6e-20	72.0	0.0	5.8e-20	71.7	0.0	1.1	1	0	0	1	1	1	1	Inositol	monophosphatase	family
FBPase	PF00316.15	gi|297526260|ref|YP_003668284.1|	-	4.8e-07	28.9	0.0	7.9e-07	28.2	0.0	1.3	1	0	0	1	1	1	1	Fructose-1-6-bisphosphatase
Flavin_Reduct	PF01613.13	gi|297526262|ref|YP_003668286.1|	-	0.011	15.6	0.0	0.011	15.6	0.0	1.0	1	0	0	1	1	1	0	Flavin	reductase	like	domain
VWA_2	PF13519.1	gi|297526263|ref|YP_003668287.1|	-	1.1e-21	77.7	0.0	1.5e-21	77.2	0.0	1.2	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.23	gi|297526263|ref|YP_003668287.1|	-	3.4e-17	62.7	0.0	6.1e-17	61.9	0.0	1.3	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA_3	PF13768.1	gi|297526263|ref|YP_003668287.1|	-	2.8e-07	30.3	0.0	1e-06	28.5	0.0	1.8	2	0	0	2	2	2	1	von	Willebrand	factor	type	A	domain
vWA-TerF-like	PF10138.4	gi|297526263|ref|YP_003668287.1|	-	0.00044	20.1	0.0	0.0012	18.7	0.0	1.7	1	1	0	1	1	1	1	vWA	found	in	TerF	C	terminus
BatD	PF13584.1	gi|297526263|ref|YP_003668287.1|	-	0.012	14.2	0.0	0.017	13.7	0.0	1.1	1	0	0	1	1	1	0	Oxygen	tolerance
Cep57_MT_bd	PF06657.8	gi|297526263|ref|YP_003668287.1|	-	0.046	13.6	1.5	0.39	10.6	0.2	2.4	2	0	0	2	2	2	0	Centrosome	microtubule-binding	domain	of	Cep57
PucR	PF07905.6	gi|297526263|ref|YP_003668287.1|	-	0.071	12.6	0.0	0.16	11.5	0.0	1.6	1	0	0	1	1	1	0	Purine	catabolism	regulatory	protein-like	family
Glyco_tran_WecB	PF03808.8	gi|297526263|ref|YP_003668287.1|	-	0.12	11.7	0.0	0.2	11.0	0.0	1.4	1	0	0	1	1	1	0	Glycosyl	transferase	WecB/TagA/CpsF	family
Glyco_hydro_53	PF07745.8	gi|297526263|ref|YP_003668287.1|	-	0.17	10.6	0.0	0.3	9.8	0.0	1.4	1	0	0	1	1	1	0	Glycosyl	hydrolase	family	53
DUF4145	PF13643.1	gi|297526263|ref|YP_003668287.1|	-	4.8	7.1	6.1	36	4.2	0.3	3.5	4	1	0	4	4	4	0	Domain	of	unknown	function	(DUF4145)
FHA	PF00498.21	gi|297526264|ref|YP_003668288.1|	-	8.8e-20	70.6	0.1	1.2e-19	70.2	0.1	1.2	1	0	0	1	1	1	1	FHA	domain
Pkinase	PF00069.20	gi|297526265|ref|YP_003668289.1|	-	3.4e-16	59.1	0.0	7.1e-16	58.1	0.0	1.6	1	0	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|297526265|ref|YP_003668289.1|	-	1.1e-06	27.9	0.0	2.5e-06	26.7	0.0	1.6	1	0	0	1	1	1	1	Protein	tyrosine	kinase
PhoU	PF01895.14	gi|297526266|ref|YP_003668290.1|	-	1.1e-24	86.6	14.4	5.8e-20	71.5	2.6	2.9	3	0	0	3	3	3	2	PhoU	domain
Antitoxin-MazE	PF04014.13	gi|297526266|ref|YP_003668290.1|	-	5.8e-11	41.8	0.0	1.6e-10	40.4	0.0	1.9	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
YojJ	PF10372.4	gi|297526266|ref|YP_003668290.1|	-	0.087	12.7	0.0	0.26	11.1	0.0	1.8	1	0	0	1	1	1	0	Bacterial	membrane-spanning	protein	N-terminus
TrkA_C	PF02080.16	gi|297526268|ref|YP_003668292.1|	-	2.1e-18	65.6	0.7	1.7e-08	33.9	0.0	2.4	2	0	0	2	2	2	2	TrkA-C	domain
PhoU	PF01895.14	gi|297526268|ref|YP_003668292.1|	-	2.6e-11	43.8	14.3	2.5e-06	27.8	1.8	2.6	2	0	0	2	2	2	2	PhoU	domain
L-fibroin	PF05849.6	gi|297526268|ref|YP_003668292.1|	-	0.24	10.7	2.9	0.2	10.9	0.3	2.1	2	0	0	2	2	2	0	Fibroin	light	chain	(L-fibroin)
eRF1_2	PF03464.10	gi|297526269|ref|YP_003668293.1|	-	5.8e-38	130.2	0.0	1.2e-37	129.1	0.0	1.6	1	0	0	1	1	1	1	eRF1	domain	2
eRF1_3	PF03465.10	gi|297526269|ref|YP_003668293.1|	-	1.5e-21	76.7	0.1	4.2e-20	72.1	0.1	2.5	1	1	0	1	1	1	1	eRF1	domain	3
eRF1_1	PF03463.10	gi|297526269|ref|YP_003668293.1|	-	6.2e-19	67.8	0.0	1.1e-18	67.0	0.0	1.4	1	0	0	1	1	1	1	eRF1	domain	1
Sua5_yciO_yrdC	PF01300.13	gi|297526270|ref|YP_003668294.1|	-	1.3e-39	135.3	0.0	1.5e-39	135.1	0.0	1.1	1	0	0	1	1	1	1	Telomere	recombination
Orexin	PF02072.10	gi|297526271|ref|YP_003668295.1|	-	0.037	13.8	0.0	0.062	13.1	0.0	1.3	1	0	0	1	1	1	0	Prepro-orexin
Tbf5	PF06331.7	gi|297526271|ref|YP_003668295.1|	-	0.042	13.6	0.0	0.11	12.3	0.0	1.6	1	0	0	1	1	1	0	Transcription	factor	TFIIH	complex	subunit	Tfb5
Glyco_hydro_114	PF03537.8	gi|297526274|ref|YP_003668298.1|	-	1.4e-18	66.4	0.1	5.5e-18	64.5	0.0	1.9	2	0	0	2	2	2	1	Glycoside-hydrolase	family	GH114
IncA	PF04156.9	gi|297526275|ref|YP_003668299.1|	-	2.7e-06	27.1	4.1	3.8e-06	26.6	2.9	1.3	1	0	0	1	1	1	1	IncA	protein
ATG16	PF08614.6	gi|297526275|ref|YP_003668299.1|	-	9.7e-05	22.2	4.4	0.00012	21.9	3.0	1.3	1	0	0	1	1	1	1	Autophagy	protein	16	(ATG16)
BLOC1_2	PF10046.4	gi|297526275|ref|YP_003668299.1|	-	0.00016	21.7	7.1	0.00029	20.9	4.9	1.4	1	0	0	1	1	1	1	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Baculo_PEP_C	PF04513.7	gi|297526275|ref|YP_003668299.1|	-	0.00017	21.4	0.1	0.00029	20.6	0.1	1.3	1	0	0	1	1	1	1	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
TBPIP	PF07106.8	gi|297526275|ref|YP_003668299.1|	-	0.00028	20.4	8.7	0.00044	19.8	6.0	1.5	1	0	0	1	1	1	1	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
AAA_13	PF13166.1	gi|297526275|ref|YP_003668299.1|	-	0.00033	19.2	4.4	0.00033	19.2	3.0	1.1	1	0	0	1	1	1	1	AAA	domain
HOOK	PF05622.7	gi|297526275|ref|YP_003668299.1|	-	0.00039	18.3	7.8	0.00072	17.5	5.4	1.3	1	0	0	1	1	1	1	HOOK	protein
Cep57_CLD_2	PF14197.1	gi|297526275|ref|YP_003668299.1|	-	0.0007	19.4	8.5	0.0015	18.4	5.9	1.6	1	0	0	1	1	1	1	Centrosome	localisation	domain	of	PPC89
CENP-F_leu_zip	PF10473.4	gi|297526275|ref|YP_003668299.1|	-	0.00093	19.0	11.9	0.0017	18.2	8.3	1.5	1	0	0	1	1	1	1	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
RTBV_P46	PF06216.6	gi|297526275|ref|YP_003668299.1|	-	0.00097	18.0	2.2	0.0013	17.6	1.5	1.1	1	0	0	1	1	1	1	Rice	tungro	bacilliform	virus	P46	protein
DUF972	PF06156.8	gi|297526275|ref|YP_003668299.1|	-	0.0011	19.2	9.0	0.0023	18.2	6.2	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF972)
Spc7	PF08317.6	gi|297526275|ref|YP_003668299.1|	-	0.0014	17.3	11.3	0.002	16.8	7.8	1.2	1	0	0	1	1	1	1	Spc7	kinetochore	protein
MIS13	PF08202.6	gi|297526275|ref|YP_003668299.1|	-	0.0025	16.9	0.8	0.003	16.6	0.6	1.2	1	0	0	1	1	1	1	Mis12-Mtw1	protein	family
DUF2968	PF11180.3	gi|297526275|ref|YP_003668299.1|	-	0.0026	17.1	0.9	0.0042	16.4	0.6	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2968)
IMD	PF08397.6	gi|297526275|ref|YP_003668299.1|	-	0.0029	16.9	6.0	0.0036	16.6	4.2	1.2	1	0	0	1	1	1	1	IRSp53/MIM	homology	domain
Atg14	PF10186.4	gi|297526275|ref|YP_003668299.1|	-	0.0051	15.7	6.5	0.0059	15.5	4.5	1.2	1	0	0	1	1	1	1	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
AAA_27	PF13514.1	gi|297526275|ref|YP_003668299.1|	-	0.0074	14.0	6.5	0.015	13.0	4.3	1.6	1	1	1	2	2	2	1	AAA	domain
Tmemb_cc2	PF10267.4	gi|297526275|ref|YP_003668299.1|	-	0.0081	14.7	4.8	0.0095	14.5	3.3	1.1	1	0	0	1	1	1	1	Predicted	transmembrane	and	coiled-coil	2	protein
AAA_23	PF13476.1	gi|297526275|ref|YP_003668299.1|	-	0.0096	16.2	8.0	0.012	15.9	5.5	1.3	1	0	0	1	1	1	1	AAA	domain
Occludin_ELL	PF07303.8	gi|297526275|ref|YP_003668299.1|	-	0.0097	16.6	9.6	0.019	15.6	5.6	1.9	2	0	0	2	2	2	1	Occludin	homology	domain
DUF724	PF05266.9	gi|297526275|ref|YP_003668299.1|	-	0.011	15.3	7.9	0.017	14.7	5.5	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF724)
DUF1319	PF07028.6	gi|297526275|ref|YP_003668299.1|	-	0.012	15.7	8.1	0.014	15.5	4.5	2.0	2	0	0	2	2	1	0	Protein	of	unknown	function	(DUF1319)
DUF641	PF04859.7	gi|297526275|ref|YP_003668299.1|	-	0.014	15.1	3.9	0.031	14.0	2.7	1.6	1	0	0	1	1	1	0	Plant	protein	of	unknown	function	(DUF641)
IFT57	PF10498.4	gi|297526275|ref|YP_003668299.1|	-	0.014	14.1	7.7	0.018	13.7	5.3	1.3	1	0	0	1	1	1	0	Intra-flagellar	transport	protein	57
ADIP	PF11559.3	gi|297526275|ref|YP_003668299.1|	-	0.015	15.2	7.6	0.031	14.1	5.1	1.6	2	0	0	2	2	1	0	Afadin-	and	alpha	-actinin-Binding
DUF869	PF05911.6	gi|297526275|ref|YP_003668299.1|	-	0.015	13.5	10.4	0.015	13.5	6.8	1.4	1	1	0	1	1	1	0	Plant	protein	of	unknown	function	(DUF869)
DP	PF08781.5	gi|297526275|ref|YP_003668299.1|	-	0.018	14.7	3.2	0.018	14.7	2.2	1.9	1	1	1	2	2	2	0	Transcription	factor	DP
DUF4404	PF14357.1	gi|297526275|ref|YP_003668299.1|	-	0.019	15.4	6.3	0.054	13.9	4.4	1.8	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4404)
Nnf1	PF03980.9	gi|297526275|ref|YP_003668299.1|	-	0.02	14.8	4.5	0.02	14.8	3.1	2.7	3	0	0	3	3	2	0	Nnf1
DUF3186	PF11382.3	gi|297526275|ref|YP_003668299.1|	-	0.02	14.0	2.8	0.02	14.0	2.0	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3186)
Tektin	PF03148.9	gi|297526275|ref|YP_003668299.1|	-	0.021	13.3	6.3	0.031	12.8	4.4	1.2	1	0	0	1	1	1	0	Tektin	family
HTH_23	PF13384.1	gi|297526275|ref|YP_003668299.1|	-	0.021	14.4	0.0	0.061	13.0	0.0	1.8	1	0	0	1	1	1	0	Homeodomain-like	domain
APG6	PF04111.7	gi|297526275|ref|YP_003668299.1|	-	0.022	13.8	7.9	0.028	13.4	5.5	1.2	1	0	0	1	1	1	0	Autophagy	protein	Apg6
Troponin	PF00992.15	gi|297526275|ref|YP_003668299.1|	-	0.022	14.8	12.2	0.037	14.0	8.4	1.5	1	0	0	1	1	1	0	Troponin
Striatin	PF08232.7	gi|297526275|ref|YP_003668299.1|	-	0.025	14.8	8.3	0.025	14.8	5.8	1.8	3	0	0	3	3	1	0	Striatin	family
DUF948	PF06103.6	gi|297526275|ref|YP_003668299.1|	-	0.026	14.3	4.1	0.076	12.8	2.8	1.9	1	1	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF948)
HTH_7	PF02796.10	gi|297526275|ref|YP_003668299.1|	-	0.026	14.3	0.0	0.083	12.7	0.0	2.0	1	1	0	1	1	1	0	Helix-turn-helix	domain	of	resolvase
Sec2p	PF06428.6	gi|297526275|ref|YP_003668299.1|	-	0.034	13.9	12.2	0.18	11.6	8.5	2.2	1	1	0	1	1	1	0	GDP/GTP	exchange	factor	Sec2p
DUF3450	PF11932.3	gi|297526275|ref|YP_003668299.1|	-	0.035	13.3	6.4	0.042	13.1	3.8	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3450)
Fib_alpha	PF08702.5	gi|297526275|ref|YP_003668299.1|	-	0.038	14.1	5.1	0.09	12.9	3.5	1.7	1	0	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
bZIP_1	PF00170.16	gi|297526275|ref|YP_003668299.1|	-	0.039	13.9	9.8	0.039	13.9	6.8	2.8	1	1	1	2	2	2	0	bZIP	transcription	factor
ParB	PF08775.5	gi|297526275|ref|YP_003668299.1|	-	0.04	14.2	8.2	0.058	13.7	5.0	1.8	1	1	0	1	1	1	0	ParB	family
Uso1_p115_C	PF04871.8	gi|297526275|ref|YP_003668299.1|	-	0.041	13.8	7.8	0.079	12.8	5.4	1.5	1	0	0	1	1	1	0	Uso1	/	p115	like	vesicle	tethering	protein,	C	terminal	region
V_ATPase_I	PF01496.14	gi|297526275|ref|YP_003668299.1|	-	0.044	11.6	7.4	0.056	11.3	5.1	1.1	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
DUF342	PF03961.8	gi|297526275|ref|YP_003668299.1|	-	0.044	12.1	9.3	0.056	11.8	6.4	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
V-SNARE	PF05008.10	gi|297526275|ref|YP_003668299.1|	-	0.046	13.8	13.1	0.61	10.2	5.1	2.8	1	1	1	2	2	2	0	Vesicle	transport	v-SNARE	protein	N-terminus
DUF1664	PF07889.7	gi|297526275|ref|YP_003668299.1|	-	0.054	13.2	6.9	0.17	11.7	4.6	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
CCDC92	PF14916.1	gi|297526275|ref|YP_003668299.1|	-	0.054	13.0	4.4	0.12	11.9	3.1	1.6	1	0	0	1	1	1	0	Coiled-coil	domain	of	unknown	function
Snapin_Pallidin	PF14712.1	gi|297526275|ref|YP_003668299.1|	-	0.055	13.7	11.1	0.065	13.5	4.7	2.4	1	1	1	2	2	2	0	Snapin/Pallidin
Bap31	PF05529.7	gi|297526275|ref|YP_003668299.1|	-	0.057	12.8	8.2	0.097	12.1	5.7	1.3	1	0	0	1	1	1	0	B-cell	receptor-associated	protein	31-like
DUF4407	PF14362.1	gi|297526275|ref|YP_003668299.1|	-	0.06	12.3	4.4	0.1	11.5	3.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
DUF1241	PF06840.6	gi|297526275|ref|YP_003668299.1|	-	0.06	12.5	9.1	0.15	11.2	5.6	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1241)
Tropomyosin_1	PF12718.2	gi|297526275|ref|YP_003668299.1|	-	0.06	13.1	12.2	0.12	12.1	8.5	1.6	1	0	0	1	1	1	0	Tropomyosin	like
Seryl_tRNA_N	PF02403.17	gi|297526275|ref|YP_003668299.1|	-	0.064	13.2	11.2	0.13	12.3	7.8	1.6	1	0	0	1	1	1	0	Seryl-tRNA	synthetase	N-terminal	domain
NPV_P10	PF05531.7	gi|297526275|ref|YP_003668299.1|	-	0.066	13.4	3.2	0.71	10.1	1.9	2.5	2	1	0	2	2	2	0	Nucleopolyhedrovirus	P10	protein
DUF1633	PF07794.6	gi|297526275|ref|YP_003668299.1|	-	0.093	10.6	2.2	0.095	10.6	1.5	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1633)
Kinetocho_Slk19	PF12709.2	gi|297526275|ref|YP_003668299.1|	-	0.12	12.4	11.6	0.2	11.7	6.8	2.3	2	1	0	2	2	1	0	Central	kinetochore-associated
HpcH_HpaI	PF03328.9	gi|297526275|ref|YP_003668299.1|	-	0.12	11.1	0.1	0.17	10.7	0.1	1.2	1	0	0	1	1	1	0	HpcH/HpaI	aldolase/citrate	lyase	family
DUF607	PF04678.8	gi|297526275|ref|YP_003668299.1|	-	0.13	12.1	2.6	0.19	11.6	1.8	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF607
HTH_38	PF13936.1	gi|297526275|ref|YP_003668299.1|	-	0.16	11.5	1.4	0.3	10.6	0.1	2.1	2	0	0	2	2	1	0	Helix-turn-helix	domain
DUF4200	PF13863.1	gi|297526275|ref|YP_003668299.1|	-	0.16	11.9	14.5	0.14	12.0	8.6	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4200)
FlaC_arch	PF05377.6	gi|297526275|ref|YP_003668299.1|	-	0.16	11.8	12.7	0.21	11.4	5.5	3.2	1	1	1	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
Hormone_1	PF00103.15	gi|297526275|ref|YP_003668299.1|	-	0.17	11.1	3.5	0.29	10.4	2.4	1.4	1	0	0	1	1	1	0	Somatotropin	hormone	family
KfrA_N	PF11740.3	gi|297526275|ref|YP_003668299.1|	-	0.19	12.1	1.7	0.6	10.5	1.2	1.9	1	1	0	1	1	1	0	Plasmid	replication	region	DNA-binding	N-term
DivIC	PF04977.10	gi|297526275|ref|YP_003668299.1|	-	0.2	11.1	13.4	0.18	11.3	5.7	2.7	1	1	1	2	2	2	0	Septum	formation	initiator
DUF812	PF05667.6	gi|297526275|ref|YP_003668299.1|	-	0.25	9.8	11.2	0.41	9.1	7.9	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF812)
COG2	PF06148.6	gi|297526275|ref|YP_003668299.1|	-	0.26	11.1	5.0	0.53	10.1	3.4	1.6	1	0	0	1	1	1	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
DUF2681	PF10883.3	gi|297526275|ref|YP_003668299.1|	-	0.28	11.3	8.2	0.093	12.9	3.0	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2681)
60KD_IMP	PF02096.15	gi|297526275|ref|YP_003668299.1|	-	0.33	10.5	2.5	0.53	9.9	1.7	1.3	1	0	0	1	1	1	0	60Kd	inner	membrane	protein
Syntaxin	PF00804.20	gi|297526275|ref|YP_003668299.1|	-	0.33	11.1	12.1	1.2	9.3	7.2	2.5	2	1	0	2	2	1	0	Syntaxin
Med4	PF10018.4	gi|297526275|ref|YP_003668299.1|	-	0.37	10.1	8.8	0.6	9.4	6.1	1.3	1	0	0	1	1	1	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
DivIVA	PF05103.8	gi|297526275|ref|YP_003668299.1|	-	0.43	10.6	12.5	0.6	10.1	6.1	2.4	1	1	1	2	2	2	0	DivIVA	protein
Vps51	PF08700.6	gi|297526275|ref|YP_003668299.1|	-	0.44	10.4	8.8	0.95	9.3	6.0	1.7	1	1	0	1	1	1	0	Vps51/Vps67
TMF_DNA_bd	PF12329.3	gi|297526275|ref|YP_003668299.1|	-	0.5	10.2	20.0	1.3	8.8	13.9	1.8	1	0	0	1	1	1	0	TATA	element	modulatory	factor	1	DNA	binding
Syntaxin-6_N	PF09177.6	gi|297526275|ref|YP_003668299.1|	-	0.51	10.7	6.2	0.92	9.9	3.9	1.9	1	1	0	1	1	1	0	Syntaxin	6,	N-terminal
GDPD	PF03009.12	gi|297526275|ref|YP_003668299.1|	-	0.56	9.6	2.9	2.6	7.4	1.7	1.9	1	1	1	2	2	2	0	Glycerophosphoryl	diester	phosphodiesterase	family
COG5	PF10392.4	gi|297526275|ref|YP_003668299.1|	-	0.7	9.8	5.6	1.2	9.1	3.2	1.8	1	1	1	2	2	2	0	Golgi	transport	complex	subunit	5
zf-C4H2	PF10146.4	gi|297526275|ref|YP_003668299.1|	-	0.76	9.7	12.0	1.2	9.1	8.1	1.4	1	1	0	1	1	1	0	Zinc	finger-containing	protein
DUF3469	PF11952.3	gi|297526275|ref|YP_003668299.1|	-	0.78	9.4	6.4	1	9.0	1.1	2.9	2	1	1	3	3	2	0	Protein	of	unknown	function	(DUF3469)
Myb_DNA-bind_6	PF13921.1	gi|297526275|ref|YP_003668299.1|	-	0.78	9.8	6.4	53	4.0	3.0	3.1	2	1	1	3	3	3	0	Myb-like	DNA-binding	domain
DUF4337	PF14235.1	gi|297526275|ref|YP_003668299.1|	-	0.88	9.4	4.9	1.5	8.5	3.4	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4337)
Prefoldin	PF02996.12	gi|297526275|ref|YP_003668299.1|	-	1	9.0	11.7	5.4	6.6	4.3	2.4	1	1	1	2	2	2	0	Prefoldin	subunit
FlxA	PF14282.1	gi|297526275|ref|YP_003668299.1|	-	1.1	9.2	6.6	2.3	8.1	4.6	1.6	1	0	0	1	1	1	0	FlxA-like	protein
CemA	PF03040.9	gi|297526275|ref|YP_003668299.1|	-	1.3	8.6	3.9	1.9	8.0	2.7	1.3	1	0	0	1	1	1	0	CemA	family
FemAB	PF02388.11	gi|297526275|ref|YP_003668299.1|	-	1.3	7.6	7.3	1.7	7.2	5.1	1.1	1	0	0	1	1	1	0	FemAB	family
DUF745	PF05335.8	gi|297526275|ref|YP_003668299.1|	-	1.8	8.0	6.3	3.1	7.2	4.4	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF745)
DUF2205	PF10224.4	gi|297526275|ref|YP_003668299.1|	-	1.8	8.1	13.9	9.3	5.9	7.2	2.4	1	1	1	2	2	2	0	Predicted	coiled-coil	protein	(DUF2205)
DUF2312	PF10073.4	gi|297526275|ref|YP_003668299.1|	-	2.8	7.3	13.9	2.1e+02	1.3	8.0	3.3	1	1	1	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2312)
DUF4140	PF13600.1	gi|297526275|ref|YP_003668299.1|	-	3.9	7.9	7.9	6.7	7.2	4.4	2.3	2	1	0	2	2	1	0	N-terminal	domain	of	unknown	function	(DUF4140)
DUF1192	PF06698.6	gi|297526275|ref|YP_003668299.1|	-	4.3	7.2	8.7	13	5.7	4.1	3.1	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1192)
Herpes_BLRF2	PF05812.7	gi|297526275|ref|YP_003668299.1|	-	4.9	6.9	13.3	0.24	11.2	3.3	2.5	1	1	1	2	2	2	0	Herpesvirus	BLRF2	protein
DUF762	PF05555.6	gi|297526276|ref|YP_003668300.1|	-	0.13	11.4	1.1	0.15	11.2	0.7	1.1	1	0	0	1	1	1	0	Coxiella	burnetii	protein	of	unknown	function	(DUF762)
Robl_LC7	PF03259.12	gi|297526277|ref|YP_003668301.1|	-	0.082	12.4	0.0	0.17	11.4	0.0	1.6	1	1	0	1	1	1	0	Roadblock/LC7	domain
TatD_DNase	PF01026.16	gi|297526278|ref|YP_003668302.1|	-	6.1e-47	159.9	0.1	7.4e-47	159.6	0.1	1.0	1	0	0	1	1	1	1	TatD	related	DNase
Microvir_lysis	PF04517.7	gi|297526278|ref|YP_003668302.1|	-	0.072	12.8	0.0	0.13	12.0	0.0	1.4	1	0	0	1	1	1	0	Microvirus	lysis	protein	(E),	C	terminus
UxaC	PF02614.9	gi|297526278|ref|YP_003668302.1|	-	0.12	10.9	1.4	5.6	5.4	0.0	2.6	1	1	1	3	3	3	0	Glucuronate	isomerase
Amidohydro_2	PF04909.9	gi|297526278|ref|YP_003668302.1|	-	0.12	11.8	0.3	0.18	11.3	0.0	1.4	2	0	0	2	2	2	0	Amidohydrolase
DUF3791	PF12668.2	gi|297526278|ref|YP_003668302.1|	-	1.1	8.9	4.0	15	5.2	0.2	3.2	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3791)
Dynein_heavy	PF03028.10	gi|297526279|ref|YP_003668303.1|	-	0.052	11.5	0.1	0.063	11.3	0.1	1.0	1	0	0	1	1	1	0	Dynein	heavy	chain	and	region	D6	of	dynein	motor
ECH	PF00378.15	gi|297526279|ref|YP_003668303.1|	-	0.1	11.6	0.0	0.16	11.0	0.0	1.2	1	0	0	1	1	1	0	Enoyl-CoA	hydratase/isomerase	family
HAD_2	PF13419.1	gi|297526280|ref|YP_003668304.1|	-	5.5e-09	36.4	0.1	1.5e-08	35.0	0.0	1.7	1	1	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|297526280|ref|YP_003668304.1|	-	5.9e-07	29.1	0.0	1.2e-06	28.1	0.0	1.5	1	0	0	1	1	1	1	HAD-hyrolase-like
HAD	PF12710.2	gi|297526280|ref|YP_003668304.1|	-	0.0027	17.8	0.1	0.0045	17.1	0.1	1.4	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
ADH_zinc_N	PF00107.21	gi|297526280|ref|YP_003668304.1|	-	0.029	13.9	0.0	0.29	10.6	0.0	2.1	2	0	0	2	2	2	0	Zinc-binding	dehydrogenase
MAGE	PF01454.14	gi|297526280|ref|YP_003668304.1|	-	0.032	13.5	0.0	0.037	13.3	0.0	1.2	1	0	0	1	1	1	0	MAGE	family
RPA_C	PF08784.6	gi|297526281|ref|YP_003668305.1|	-	0.016	15.6	0.0	0.019	15.3	0.0	1.1	1	0	0	1	1	1	0	Replication	protein	A	C	terminal
DDE_Tnp_1_assoc	PF13808.1	gi|297526281|ref|YP_003668305.1|	-	0.046	13.3	0.0	0.057	13.1	0.0	1.3	1	0	0	1	1	1	0	DDE_Tnp_1-associated
DUF4423	PF14394.1	gi|297526281|ref|YP_003668305.1|	-	0.08	12.4	0.0	0.14	11.7	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4423)
DNA_pol3_delta	PF06144.8	gi|297526281|ref|YP_003668305.1|	-	0.085	12.3	0.0	0.11	11.9	0.0	1.2	1	0	0	1	1	1	0	DNA	polymerase	III,	delta	subunit
Rad1	PF02144.11	gi|297526281|ref|YP_003668305.1|	-	0.13	11.0	0.0	0.18	10.5	0.0	1.2	1	0	0	1	1	1	0	Repair	protein	Rad1/Rec1/Rad17
MerR_1	PF13411.1	gi|297526281|ref|YP_003668305.1|	-	0.18	11.6	0.4	0.74	9.6	0.3	1.9	1	1	0	1	1	1	0	MerR	HTH	family	regulatory	protein
Radical_SAM	PF04055.16	gi|297526282|ref|YP_003668306.1|	-	7.4e-25	88.0	0.1	1.7e-24	86.8	0.1	1.6	2	0	0	2	2	2	1	Radical	SAM	superfamily
B12-binding	PF02310.14	gi|297526282|ref|YP_003668306.1|	-	7.2e-06	25.8	0.0	1.8e-05	24.6	0.0	1.7	1	0	0	1	1	1	1	B12	binding	domain
Vps23_core	PF09454.5	gi|297526282|ref|YP_003668306.1|	-	0.052	13.1	0.0	0.13	11.9	0.0	1.7	1	0	0	1	1	1	0	Vps23	core	domain
DUF167	PF02594.11	gi|297526283|ref|YP_003668307.1|	-	3.6e-19	68.4	0.3	5.1e-19	67.9	0.0	1.4	2	0	0	2	2	2	1	Uncharacterised	ACR,	YggU	family	COG1872
Zn-ribbon_8	PF09723.5	gi|297526284|ref|YP_003668308.1|	-	0.00069	19.5	1.9	0.0012	18.7	1.3	1.4	1	0	0	1	1	1	1	Zinc	ribbon	domain
HTH_5	PF01022.15	gi|297526284|ref|YP_003668308.1|	-	0.0026	17.3	0.0	0.0054	16.3	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_11	PF08279.7	gi|297526284|ref|YP_003668308.1|	-	0.0063	16.1	0.0	0.011	15.3	0.0	1.4	1	0	0	1	1	1	1	HTH	domain
HypA	PF01155.14	gi|297526284|ref|YP_003668308.1|	-	0.012	15.3	0.0	0.014	15.1	0.0	1.2	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
TFIIS_C	PF01096.13	gi|297526284|ref|YP_003668308.1|	-	0.06	12.9	0.9	9.8	5.9	0.1	2.3	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zf-C2HC5	PF06221.8	gi|297526284|ref|YP_003668308.1|	-	0.065	13.0	0.1	0.095	12.4	0.1	1.2	1	0	0	1	1	1	0	Putative	zinc	finger	motif,	C2HC5-type
HTH_Mga	PF08280.6	gi|297526284|ref|YP_003668308.1|	-	0.12	12.1	0.0	0.21	11.3	0.0	1.4	1	0	0	1	1	1	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_IclR	PF09339.5	gi|297526284|ref|YP_003668308.1|	-	0.13	11.8	0.0	0.26	10.9	0.0	1.4	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
FYDLN_acid	PF09538.5	gi|297526284|ref|YP_003668308.1|	-	0.21	12.1	2.2	0.34	11.5	1.5	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(FYDLN_acid)
TF_Zn_Ribbon	PF08271.7	gi|297526284|ref|YP_003668308.1|	-	0.24	10.7	1.5	8.9	5.7	0.2	2.3	2	0	0	2	2	2	0	TFIIB	zinc-binding
UPF0547	PF10571.4	gi|297526284|ref|YP_003668308.1|	-	0.82	9.4	5.3	1.3	8.7	0.1	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
DUF3039	PF11238.3	gi|297526284|ref|YP_003668308.1|	-	1.3	8.4	4.5	2.3	7.7	3.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3039)
zf-Sec23_Sec24	PF04810.10	gi|297526284|ref|YP_003668308.1|	-	7.7	6.1	6.6	22	4.7	0.2	2.2	2	0	0	2	2	2	0	Sec23/Sec24	zinc	finger
PALP	PF00291.20	gi|297526285|ref|YP_003668309.1|	-	7.6e-75	251.9	0.8	9e-75	251.7	0.5	1.1	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
ACT	PF01842.20	gi|297526285|ref|YP_003668309.1|	-	3e-06	26.5	0.1	5.9e-05	22.4	0.0	2.4	2	0	0	2	2	2	1	ACT	domain
PCMT	PF01135.14	gi|297526285|ref|YP_003668309.1|	-	0.0053	16.3	0.1	0.0099	15.4	0.1	1.4	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
HAD	PF12710.2	gi|297526286|ref|YP_003668310.1|	-	9.5e-13	48.7	0.0	1.3e-12	48.3	0.0	1.2	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|297526286|ref|YP_003668310.1|	-	9.5e-13	49.0	0.0	7e-11	42.9	0.0	2.1	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD_2	PF13419.1	gi|297526286|ref|YP_003668310.1|	-	5.8e-11	42.9	0.1	1.1e-10	42.0	0.0	1.5	1	1	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.7	gi|297526286|ref|YP_003668310.1|	-	1.1e-07	31.6	0.0	0.0002	21.0	0.0	2.8	2	1	0	2	2	2	2	haloacid	dehalogenase-like	hydrolase
Put_Phosphatase	PF06888.7	gi|297526286|ref|YP_003668310.1|	-	0.0017	17.6	0.0	0.024	13.8	0.0	2.0	2	0	0	2	2	2	1	Putative	Phosphatase
Hydrolase_6	PF13344.1	gi|297526286|ref|YP_003668310.1|	-	0.0052	16.6	0.3	0.043	13.7	0.2	2.2	1	1	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
NT5C	PF06941.7	gi|297526286|ref|YP_003668310.1|	-	0.018	14.5	0.0	0.027	13.9	0.0	1.3	1	0	0	1	1	1	0	5'	nucleotidase,	deoxy	(Pyrimidine),	cytosolic	type	C	protein	(NT5C)
NIF	PF03031.13	gi|297526286|ref|YP_003668310.1|	-	0.054	13.1	0.0	0.18	11.4	0.0	1.9	1	1	0	1	1	1	0	NLI	interacting	factor-like	phosphatase
Acid_phosphat_B	PF03767.9	gi|297526286|ref|YP_003668310.1|	-	0.066	12.5	0.0	0.099	11.9	0.0	1.2	1	0	0	1	1	1	0	HAD	superfamily,	subfamily	IIIB	(Acid	phosphatase)
V_ATPase_I	PF01496.14	gi|297526287|ref|YP_003668311.1|	-	0.02	12.7	3.7	0.023	12.5	2.6	1.1	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
LAGLIDADG_3	PF14528.1	gi|297526287|ref|YP_003668311.1|	-	0.027	14.7	0.6	0.08	13.1	0.2	2.0	1	1	0	1	1	1	0	LAGLIDADG-like	domain
Frataxin_Cyay	PF01491.11	gi|297526287|ref|YP_003668311.1|	-	0.032	14.0	0.2	0.08	12.7	0.1	1.8	1	1	0	1	1	1	0	Frataxin-like	domain
Fib_alpha	PF08702.5	gi|297526287|ref|YP_003668311.1|	-	0.35	10.9	3.8	0.2	11.7	0.4	2.1	3	0	0	3	3	3	0	Fibrinogen	alpha/beta	chain	family
Laminin_I	PF06008.9	gi|297526287|ref|YP_003668311.1|	-	0.41	9.9	4.8	0.16	11.2	1.2	1.9	2	1	0	2	2	2	0	Laminin	Domain	I
Cep57_MT_bd	PF06657.8	gi|297526287|ref|YP_003668311.1|	-	3.1	7.7	7.8	3.6	7.6	0.5	3.4	3	1	0	3	3	3	0	Centrosome	microtubule-binding	domain	of	Cep57
Ribosomal_L21e	PF01157.13	gi|297526288|ref|YP_003668312.1|	-	0.028	14.1	1.3	0.038	13.7	0.9	1.4	1	1	0	1	1	1	0	Ribosomal	protein	L21e
DUF4555	PF15093.1	gi|297526288|ref|YP_003668312.1|	-	0.072	11.9	0.0	0.085	11.7	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4555)
TRAM	PF01938.15	gi|297526288|ref|YP_003668312.1|	-	0.092	12.5	1.3	0.19	11.5	0.9	1.6	1	1	0	1	1	1	0	TRAM	domain
S1	PF00575.18	gi|297526288|ref|YP_003668312.1|	-	0.12	12.4	0.6	8.5	6.5	0.0	2.3	2	1	0	2	2	2	0	S1	RNA	binding	domain
Adenosine_kin	PF04008.9	gi|297526290|ref|YP_003668314.1|	-	9.4e-75	249.3	0.1	1.1e-74	249.1	0.1	1.0	1	0	0	1	1	1	1	Adenosine	specific	kinase
Lentiviral_Tat	PF02998.9	gi|297526291|ref|YP_003668315.1|	-	0.013	15.2	1.7	0.014	15.1	0.0	1.9	2	0	0	2	2	2	0	Lentiviral	Tat	protein
PNP_UDP_1	PF01048.15	gi|297526292|ref|YP_003668316.1|	-	6.5e-44	149.6	0.1	7.4e-44	149.4	0.1	1.0	1	0	0	1	1	1	1	Phosphorylase	superfamily
tRNA-synt_1e	PF01406.14	gi|297526293|ref|YP_003668317.1|	-	4.5e-124	413.4	0.0	5.9e-124	413.0	0.0	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1g	PF09334.6	gi|297526293|ref|YP_003668317.1|	-	4e-15	55.3	1.7	3.1e-09	35.9	0.3	2.2	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(M)
DALR_2	PF09190.6	gi|297526293|ref|YP_003668317.1|	-	1.6e-08	34.6	0.0	8.1e-08	32.4	0.0	2.2	2	0	0	2	2	2	1	DALR	domain
tRNA-synt_1	PF00133.17	gi|297526293|ref|YP_003668317.1|	-	4.7e-06	24.8	0.0	0.00019	19.5	0.0	2.2	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1f	PF01921.13	gi|297526293|ref|YP_003668317.1|	-	0.00017	20.3	0.4	0.00063	18.5	0.0	1.9	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(K)
tRNA-synt_1c	PF00749.16	gi|297526293|ref|YP_003668317.1|	-	0.016	13.9	0.5	0.27	9.8	0.0	2.3	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
ArsA_ATPase	PF02374.10	gi|297526293|ref|YP_003668317.1|	-	0.027	13.5	0.7	0.052	12.5	0.5	1.4	1	0	0	1	1	1	0	Anion-transporting	ATPase
tRNA-synt_1d	PF00750.14	gi|297526293|ref|YP_003668317.1|	-	0.064	12.0	1.5	0.36	9.5	0.7	2.3	2	1	1	3	3	3	0	tRNA	synthetases	class	I	(R)
DUF848	PF05852.6	gi|297526293|ref|YP_003668317.1|	-	0.12	12.2	0.2	0.12	12.2	0.2	2.2	3	0	0	3	3	3	0	Gammaherpesvirus	protein	of	unknown	function	(DUF848)
HTH_24	PF13412.1	gi|297526294|ref|YP_003668318.1|	-	0.00015	21.0	0.4	0.0028	16.9	0.2	2.8	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
Dodecin	PF07311.7	gi|297526294|ref|YP_003668318.1|	-	0.0013	18.7	0.6	0.0033	17.4	0.4	1.6	1	0	0	1	1	1	1	Dodecin
UPF0102	PF02021.12	gi|297526294|ref|YP_003668318.1|	-	0.0014	18.4	1.1	0.0026	17.6	0.2	1.9	2	0	0	2	2	1	1	Uncharacterised	protein	family	UPF0102
Penicillinase_R	PF03965.11	gi|297526294|ref|YP_003668318.1|	-	0.0093	16.0	1.7	0.39	10.8	0.3	2.4	1	1	1	2	2	2	1	Penicillinase	repressor
HTH_Crp_2	PF13545.1	gi|297526294|ref|YP_003668318.1|	-	0.011	15.4	0.6	0.064	13.0	0.1	2.3	1	1	1	2	2	2	0	Crp-like	helix-turn-helix	domain
DUF1626	PF07788.6	gi|297526294|ref|YP_003668318.1|	-	0.012	15.4	0.4	0.045	13.5	0.3	2.0	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1626)
GerE	PF00196.14	gi|297526294|ref|YP_003668318.1|	-	0.025	13.8	0.1	0.081	12.2	0.1	1.9	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
HTH_AsnC-type	PF13404.1	gi|297526294|ref|YP_003668318.1|	-	0.034	13.6	0.1	0.65	9.5	0.0	2.3	2	0	0	2	2	2	0	AsnC-type	helix-turn-helix	domain
MarR	PF01047.17	gi|297526294|ref|YP_003668318.1|	-	0.043	13.5	0.2	0.043	13.5	0.1	2.5	4	0	0	4	4	3	0	MarR	family
DUF91	PF01939.11	gi|297526294|ref|YP_003668318.1|	-	0.07	12.2	1.7	0.13	11.4	1.0	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	DUF91
LexA_DNA_bind	PF01726.11	gi|297526294|ref|YP_003668318.1|	-	0.089	12.3	0.0	0.29	10.7	0.0	1.8	1	0	0	1	1	1	0	LexA	DNA	binding	domain
HTH_11	PF08279.7	gi|297526294|ref|YP_003668318.1|	-	0.18	11.4	3.9	0.75	9.4	0.1	3.3	4	0	0	4	4	4	0	HTH	domain
HTH_10	PF04967.7	gi|297526294|ref|YP_003668318.1|	-	0.32	10.6	3.1	5.1	6.7	0.2	2.8	3	0	0	3	3	3	0	HTH	DNA	binding	domain
HTH_19	PF12844.2	gi|297526294|ref|YP_003668318.1|	-	0.33	11.0	5.2	3.8	7.6	0.2	3.3	3	0	0	3	3	3	0	Helix-turn-helix	domain
DUF4143	PF13635.1	gi|297526294|ref|YP_003668318.1|	-	0.36	11.0	2.5	0.33	11.1	0.2	2.1	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4143)
IF2_N	PF04760.10	gi|297526294|ref|YP_003668318.1|	-	0.88	9.2	3.7	2.1	8.0	0.1	2.9	3	0	0	3	3	3	0	Translation	initiation	factor	IF-2,	N-terminal	region
AAA_17	PF13207.1	gi|297526294|ref|YP_003668318.1|	-	0.92	10.3	3.6	0.87	10.4	0.4	2.2	2	1	1	3	3	3	0	AAA	domain
DUF3791	PF12668.2	gi|297526294|ref|YP_003668318.1|	-	4.1	7.0	5.4	4	7.1	0.1	3.3	4	1	0	4	4	4	0	Protein	of	unknown	function	(DUF3791)
Glycos_transf_1	PF00534.15	gi|297526295|ref|YP_003668319.1|	-	0.021	14.2	0.0	0.035	13.5	0.0	1.5	1	1	0	1	1	1	0	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|297526295|ref|YP_003668319.1|	-	0.071	13.2	0.0	0.19	11.8	0.0	1.8	1	1	0	1	1	1	0	Glycosyl	transferases	group	1
Radical_SAM	PF04055.16	gi|297526296|ref|YP_003668320.1|	-	4.5e-07	30.1	2.8	1.5e-06	28.5	0.4	2.8	3	2	0	3	3	3	1	Radical	SAM	superfamily
MC1	PF05854.6	gi|297526297|ref|YP_003668321.1|	-	0.12	12.3	0.1	0.14	12.0	0.0	1.3	1	1	0	1	1	1	0	Non-histone	chromosomal	protein	MC1
AA_kinase	PF00696.23	gi|297526299|ref|YP_003668323.1|	-	2.4e-29	102.5	0.0	2.8e-29	102.3	0.0	1.0	1	0	0	1	1	1	1	Amino	acid	kinase	family
tRNA_synt_2f	PF02092.12	gi|297526299|ref|YP_003668323.1|	-	0.051	12.1	0.0	0.073	11.6	0.0	1.1	1	0	0	1	1	1	0	Glycyl-tRNA	synthetase	beta	subunit
TetR_C_8	PF14278.1	gi|297526299|ref|YP_003668323.1|	-	0.053	13.9	0.0	7.6	6.9	0.0	2.8	2	1	1	3	3	3	0	Transcriptional	regulator	C-terminal	region
TP_methylase	PF00590.15	gi|297526301|ref|YP_003668325.1|	-	2.5e-23	82.8	0.0	3.1e-23	82.6	0.0	1.1	1	0	0	1	1	1	1	Tetrapyrrole	(Corrin/Porphyrin)	Methylases
CENP-R	PF06729.7	gi|297526301|ref|YP_003668325.1|	-	0.21	11.2	0.3	0.35	10.5	0.2	1.3	1	0	0	1	1	1	0	Kinetochore	component,	CENP-R
Peripla_BP_2	PF01497.13	gi|297526302|ref|YP_003668326.1|	-	3.3e-28	98.4	0.3	4.9e-28	97.8	0.2	1.2	1	0	0	1	1	1	1	Periplasmic	binding	protein
DUF999	PF06198.6	gi|297526302|ref|YP_003668326.1|	-	0.00073	19.3	0.0	0.0015	18.3	0.0	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF999)
TMEM154	PF15102.1	gi|297526302|ref|YP_003668326.1|	-	0.023	14.4	10.2	0.047	13.4	7.1	1.5	1	0	0	1	1	1	0	TMEM154	protein	family
DUF4229	PF14012.1	gi|297526302|ref|YP_003668326.1|	-	0.087	12.7	0.0	0.22	11.4	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4229)
AIP3	PF03915.8	gi|297526302|ref|YP_003668326.1|	-	0.19	10.5	2.4	0.38	9.6	0.0	1.9	2	0	0	2	2	2	0	Actin	interacting	protein	3
Mucin	PF01456.12	gi|297526302|ref|YP_003668326.1|	-	0.25	11.0	38.4	0.47	10.2	26.6	1.4	1	0	0	1	1	1	0	Mucin-like	glycoprotein
Glycophorin_A	PF01102.13	gi|297526302|ref|YP_003668326.1|	-	0.33	10.7	9.5	0.26	11.0	5.4	1.7	2	0	0	2	2	2	0	Glycophorin	A
FecCD	PF01032.13	gi|297526303|ref|YP_003668327.1|	-	5.3e-59	199.5	39.8	7e-59	199.1	27.6	1.1	1	0	0	1	1	1	1	FecCD	transport	family
ABC_tran	PF00005.22	gi|297526304|ref|YP_003668328.1|	-	1.3e-26	93.4	0.0	1.8e-26	93.0	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297526304|ref|YP_003668328.1|	-	3.2e-17	63.4	1.5	7.9e-15	55.5	1.0	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|297526304|ref|YP_003668328.1|	-	4.4e-08	32.5	0.5	0.0033	16.5	0.3	2.3	1	1	0	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|297526304|ref|YP_003668328.1|	-	1.9e-06	27.2	0.1	2.7e-05	23.4	0.0	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|297526304|ref|YP_003668328.1|	-	9.6e-06	26.0	1.1	2.1e-05	24.9	0.8	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|297526304|ref|YP_003668328.1|	-	1.2e-05	25.2	0.1	0.00069	19.5	0.0	2.3	1	1	1	2	2	2	1	AAA	domain
Arch_ATPase	PF01637.13	gi|297526304|ref|YP_003668328.1|	-	5.3e-05	23.0	0.1	6.9e-05	22.6	0.1	1.3	1	0	0	1	1	1	1	Archaeal	ATPase
AAA_16	PF13191.1	gi|297526304|ref|YP_003668328.1|	-	8.7e-05	22.5	0.0	0.00012	22.0	0.0	1.3	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|297526304|ref|YP_003668328.1|	-	0.00011	22.3	0.9	0.0012	18.9	0.6	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|297526304|ref|YP_003668328.1|	-	0.00026	21.8	1.1	0.00083	20.1	0.7	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|297526304|ref|YP_003668328.1|	-	0.00028	20.3	0.2	0.00057	19.3	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
Rad17	PF03215.10	gi|297526304|ref|YP_003668328.1|	-	0.0004	19.1	0.0	0.00054	18.7	0.0	1.2	1	0	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
AAA	PF00004.24	gi|297526304|ref|YP_003668328.1|	-	0.00043	20.4	0.0	0.00071	19.7	0.0	1.6	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Zeta_toxin	PF06414.7	gi|297526304|ref|YP_003668328.1|	-	0.00066	18.8	0.0	0.00097	18.2	0.0	1.2	1	0	0	1	1	1	1	Zeta	toxin
AAA_30	PF13604.1	gi|297526304|ref|YP_003668328.1|	-	0.00086	18.9	0.0	0.0013	18.3	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
ABC_ATPase	PF09818.4	gi|297526304|ref|YP_003668328.1|	-	0.0017	17.0	0.2	0.0025	16.4	0.2	1.2	1	0	0	1	1	1	1	Predicted	ATPase	of	the	ABC	class
ATP-synt_ab	PF00006.20	gi|297526304|ref|YP_003668328.1|	-	0.0021	17.5	0.0	0.0026	17.2	0.0	1.4	1	1	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
NACHT	PF05729.7	gi|297526304|ref|YP_003668328.1|	-	0.0022	17.6	0.5	0.0092	15.6	0.1	2.0	2	0	0	2	2	2	1	NACHT	domain
AAA_25	PF13481.1	gi|297526304|ref|YP_003668328.1|	-	0.0058	16.0	0.0	0.0074	15.7	0.0	1.3	1	1	0	1	1	1	1	AAA	domain
cobW	PF02492.14	gi|297526304|ref|YP_003668328.1|	-	0.0071	15.8	0.1	0.014	14.8	0.1	1.5	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_24	PF13479.1	gi|297526304|ref|YP_003668328.1|	-	0.011	15.3	0.3	0.018	14.6	0.2	1.3	1	0	0	1	1	1	0	AAA	domain
DUF258	PF03193.11	gi|297526304|ref|YP_003668328.1|	-	0.012	14.8	0.0	0.016	14.4	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_19	PF13245.1	gi|297526304|ref|YP_003668328.1|	-	0.015	15.0	0.0	0.03	14.0	0.0	1.4	1	0	0	1	1	1	0	Part	of	AAA	domain
UPF0079	PF02367.12	gi|297526304|ref|YP_003668328.1|	-	0.016	14.8	0.0	0.033	13.8	0.0	1.5	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
MobB	PF03205.9	gi|297526304|ref|YP_003668328.1|	-	0.016	14.9	0.1	0.035	13.8	0.1	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_10	PF12846.2	gi|297526304|ref|YP_003668328.1|	-	0.021	14.2	0.3	0.069	12.5	0.1	1.8	1	1	0	2	2	2	0	AAA-like	domain
NB-ARC	PF00931.17	gi|297526304|ref|YP_003668328.1|	-	0.025	13.4	0.6	0.057	12.2	0.4	1.8	1	1	0	1	1	1	0	NB-ARC	domain
AAA_18	PF13238.1	gi|297526304|ref|YP_003668328.1|	-	0.031	14.5	0.9	0.17	12.2	0.7	2.1	1	1	0	1	1	1	0	AAA	domain
KH_2	PF07650.12	gi|297526304|ref|YP_003668328.1|	-	0.036	13.6	0.2	0.095	12.2	0.1	1.7	1	0	0	1	1	1	0	KH	domain
T2SE	PF00437.15	gi|297526304|ref|YP_003668328.1|	-	0.041	12.7	0.5	0.079	11.8	0.3	1.4	1	1	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_28	PF13521.1	gi|297526304|ref|YP_003668328.1|	-	0.044	13.7	0.1	0.073	13.0	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_33	PF13671.1	gi|297526304|ref|YP_003668328.1|	-	0.049	13.5	0.1	0.12	12.2	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
MutS_V	PF00488.16	gi|297526304|ref|YP_003668328.1|	-	0.056	12.8	0.1	0.11	11.8	0.1	1.4	1	0	0	1	1	1	0	MutS	domain	V
AAA_13	PF13166.1	gi|297526304|ref|YP_003668328.1|	-	0.058	11.8	0.0	0.1	11.0	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_5	PF07728.9	gi|297526304|ref|YP_003668328.1|	-	0.085	12.5	0.0	0.18	11.4	0.0	1.6	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
SRP54	PF00448.17	gi|297526304|ref|YP_003668328.1|	-	0.085	12.2	0.2	0.14	11.5	0.1	1.3	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA_11	PF13086.1	gi|297526304|ref|YP_003668328.1|	-	0.14	11.7	0.1	0.17	11.4	0.1	1.4	1	1	0	1	1	1	0	AAA	domain
DUF3584	PF12128.3	gi|297526304|ref|YP_003668328.1|	-	0.14	9.4	0.2	0.19	8.9	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
HTH_24	PF13412.1	gi|297526305|ref|YP_003668329.1|	-	0.084	12.2	0.4	0.27	10.6	0.0	2.1	2	0	0	2	2	2	0	Winged	helix-turn-helix	DNA-binding
Isochorismatase	PF00857.15	gi|297526306|ref|YP_003668330.1|	-	1.1e-50	172.0	0.0	1.2e-50	171.8	0.0	1.0	1	0	0	1	1	1	1	Isochorismatase	family
AAA_25	PF13481.1	gi|297526306|ref|YP_003668330.1|	-	0.00031	20.1	0.0	0.00064	19.1	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
Radical_SAM	PF04055.16	gi|297526307|ref|YP_003668331.1|	-	2.4e-11	44.0	0.3	8.1e-11	42.3	0.1	1.8	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|297526307|ref|YP_003668331.1|	-	0.012	15.6	0.0	0.026	14.5	0.0	1.6	1	0	0	1	1	1	0	4Fe-4S	single	cluster	domain
PSK_trans_fac	PF07704.6	gi|297526308|ref|YP_003668332.1|	-	0.0054	17.3	0.3	0.0065	17.1	0.2	1.1	1	0	0	1	1	1	1	Rv0623-like	transcription	factor
YpzI	PF14140.1	gi|297526308|ref|YP_003668332.1|	-	0.018	14.5	0.0	0.028	13.9	0.0	1.3	1	0	0	1	1	1	0	YpzI-like	protein
RHH_1	PF01402.16	gi|297526308|ref|YP_003668332.1|	-	0.031	14.1	4.7	0.11	12.4	0.8	3.2	3	1	0	3	3	3	0	Ribbon-helix-helix	protein,	copG	family
DUF188	PF02639.9	gi|297526308|ref|YP_003668332.1|	-	0.1	12.0	0.3	0.14	11.5	0.0	1.4	2	0	0	2	2	2	0	Uncharacterized	BCR,	YaiI/YqxD	family	COG1671
DUF3545	PF12065.3	gi|297526308|ref|YP_003668332.1|	-	0.99	9.2	0.1	0.99	9.2	0.0	2.4	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3545)
OrfB_Zn_ribbon	PF07282.6	gi|297526310|ref|YP_003668334.1|	-	4.2e-19	67.9	0.0	8.8e-19	66.9	0.0	1.6	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Hydrolase_3	PF08282.7	gi|297526311|ref|YP_003668335.1|	-	2e-18	66.9	5.9	2.7e-18	66.4	4.1	1.2	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.2	gi|297526311|ref|YP_003668335.1|	-	0.00064	19.9	0.2	0.01	16.0	0.1	2.2	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
SCF	PF02404.10	gi|297526311|ref|YP_003668335.1|	-	0.0039	16.4	0.3	0.0081	15.3	0.2	1.5	1	0	0	1	1	1	1	Stem	cell	factor
Hydrolase	PF00702.21	gi|297526311|ref|YP_003668335.1|	-	0.019	15.3	0.7	0.19	12.0	0.5	2.5	1	1	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
Hydrolase_6	PF13344.1	gi|297526311|ref|YP_003668335.1|	-	0.026	14.3	0.0	0.071	13.0	0.0	1.8	1	1	0	1	1	1	0	Haloacid	dehalogenase-like	hydrolase
Osmo_MPGsynth	PF09488.5	gi|297526312|ref|YP_003668336.1|	-	2.1e-165	550.0	0.0	2.4e-165	549.8	0.0	1.0	1	0	0	1	1	1	1	Mannosyl-3-phosphoglycerate	synthase	(osmo_MPGsynth)
Glycos_transf_2	PF00535.21	gi|297526312|ref|YP_003668336.1|	-	0.057	13.0	0.1	5.4	6.6	0.0	2.3	2	0	0	2	2	2	0	Glycosyl	transferase	family	2
ELFV_dehydrog	PF00208.16	gi|297526313|ref|YP_003668337.1|	-	2.6e-79	266.2	0.8	3.3e-79	265.9	0.5	1.1	1	0	0	1	1	1	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
ELFV_dehydrog_N	PF02812.13	gi|297526313|ref|YP_003668337.1|	-	6.6e-50	168.0	0.0	1.1e-49	167.3	0.0	1.4	1	0	0	1	1	1	1	Glu/Leu/Phe/Val	dehydrogenase,	dimerisation	domain
2-Hacid_dh_C	PF02826.14	gi|297526313|ref|YP_003668337.1|	-	2.3e-05	23.6	0.1	3.9e-05	22.8	0.1	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
AlaDh_PNT_C	PF01262.16	gi|297526313|ref|YP_003668337.1|	-	0.0013	18.3	2.3	0.0047	16.5	1.6	2.0	1	1	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
AdoHcyase_NAD	PF00670.16	gi|297526313|ref|YP_003668337.1|	-	0.0026	17.6	1.0	0.006	16.4	0.4	1.6	1	1	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
Bac_GDH	PF05088.7	gi|297526313|ref|YP_003668337.1|	-	0.005	14.3	0.0	0.007	13.8	0.0	1.1	1	0	0	1	1	1	1	Bacterial	NAD-glutamate	dehydrogenase
Shikimate_DH	PF01488.15	gi|297526313|ref|YP_003668337.1|	-	0.0083	16.2	1.5	0.042	13.9	0.5	2.5	2	1	0	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
NAD_binding_7	PF13241.1	gi|297526313|ref|YP_003668337.1|	-	0.026	14.7	0.2	0.052	13.8	0.2	1.5	1	0	0	1	1	1	0	Putative	NAD(P)-binding
IlvN	PF07991.7	gi|297526313|ref|YP_003668337.1|	-	0.056	12.8	0.4	0.12	11.7	0.3	1.7	1	1	0	1	1	1	0	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
TrkA_N	PF02254.13	gi|297526313|ref|YP_003668337.1|	-	0.098	12.6	0.5	0.45	10.5	0.4	2.2	1	1	0	1	1	1	0	TrkA-N	domain
DUF504	PF04457.7	gi|297526314|ref|YP_003668338.1|	-	7.8e-14	51.5	7.4	1.1e-13	51.1	5.1	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF504)
DUF134	PF02001.11	gi|297526315|ref|YP_003668339.1|	-	1.6e-20	72.9	0.1	2e-20	72.6	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF134
Sigma70_r4_2	PF08281.7	gi|297526315|ref|YP_003668339.1|	-	3.4e-07	29.6	0.0	5.5e-07	28.9	0.0	1.4	1	0	0	1	1	1	1	Sigma-70,	region	4
Sigma70_r4	PF04545.11	gi|297526315|ref|YP_003668339.1|	-	5.9e-06	25.4	0.1	9.4e-06	24.8	0.0	1.3	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_28	PF13518.1	gi|297526315|ref|YP_003668339.1|	-	0.00047	20.1	0.2	0.00086	19.2	0.1	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_3	PF01381.17	gi|297526315|ref|YP_003668339.1|	-	0.0006	19.6	0.0	0.00087	19.0	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix
HTH_23	PF13384.1	gi|297526315|ref|YP_003668339.1|	-	0.001	18.6	0.0	0.0015	18.0	0.0	1.3	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_31	PF13560.1	gi|297526315|ref|YP_003668339.1|	-	0.0019	18.3	0.0	0.0025	17.9	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_psq	PF05225.11	gi|297526315|ref|YP_003668339.1|	-	0.007	15.8	0.0	0.012	15.1	0.0	1.4	1	0	0	1	1	1	1	helix-turn-helix,	Psq	domain
HTH_17	PF12728.2	gi|297526315|ref|YP_003668339.1|	-	0.0074	16.5	0.1	0.018	15.3	0.0	1.7	2	0	0	2	2	2	1	Helix-turn-helix	domain
Sigma70_ECF	PF07638.6	gi|297526315|ref|YP_003668339.1|	-	0.0094	15.6	0.0	0.011	15.4	0.0	1.1	1	0	0	1	1	1	1	ECF	sigma	factor
HTH_24	PF13412.1	gi|297526315|ref|YP_003668339.1|	-	0.024	14.0	0.0	0.038	13.3	0.0	1.3	1	0	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
HTH_8	PF02954.14	gi|297526315|ref|YP_003668339.1|	-	0.094	12.2	0.0	0.2	11.2	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	Fis	family
HTH_37	PF13744.1	gi|297526315|ref|YP_003668339.1|	-	0.095	12.5	0.0	0.14	11.9	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
polyprenyl_synt	PF00348.12	gi|297526316|ref|YP_003668340.1|	-	8.3e-50	169.0	0.1	5.6e-30	104.0	0.0	2.1	2	0	0	2	2	2	2	Polyprenyl	synthetase
5-FTHF_cyc-lig	PF01812.15	gi|297526317|ref|YP_003668341.1|	-	4e-33	114.7	0.0	5.1e-33	114.4	0.0	1.0	1	0	0	1	1	1	1	5-formyltetrahydrofolate	cyclo-ligase	family
GPW_gp25	PF04965.9	gi|297526317|ref|YP_003668341.1|	-	0.11	12.0	0.0	0.2	11.2	0.0	1.4	1	0	0	1	1	1	0	Gene	25-like	lysozyme
OMPdecase	PF00215.19	gi|297526318|ref|YP_003668342.1|	-	2.3e-25	89.3	0.6	2.7e-25	89.1	0.4	1.1	1	0	0	1	1	1	1	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
PcrB	PF01884.12	gi|297526318|ref|YP_003668342.1|	-	1.7e-07	30.7	1.2	7.8e-07	28.5	0.4	1.9	2	0	0	2	2	2	1	PcrB	family
Ribul_P_3_epim	PF00834.14	gi|297526318|ref|YP_003668342.1|	-	3.9e-06	26.1	0.6	5.9e-06	25.5	0.4	1.3	1	0	0	1	1	1	1	Ribulose-phosphate	3	epimerase	family
His_biosynth	PF00977.16	gi|297526318|ref|YP_003668342.1|	-	1.8e-05	24.1	0.1	2.6e-05	23.6	0.0	1.3	1	0	0	1	1	1	1	Histidine	biosynthesis	protein
NanE	PF04131.9	gi|297526318|ref|YP_003668342.1|	-	4.7e-05	22.4	0.2	0.00017	20.6	0.1	1.9	1	1	1	2	2	2	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
ThiG	PF05690.9	gi|297526318|ref|YP_003668342.1|	-	0.00049	19.2	0.3	0.00083	18.5	0.2	1.3	1	1	0	1	1	1	1	Thiazole	biosynthesis	protein	ThiG
IMPDH	PF00478.20	gi|297526318|ref|YP_003668342.1|	-	0.0021	17.0	0.3	0.0025	16.7	0.2	1.2	1	0	0	1	1	1	1	IMP	dehydrogenase	/	GMP	reductase	domain
PEP_mutase	PF13714.1	gi|297526318|ref|YP_003668342.1|	-	0.0022	17.2	0.1	0.082	12.1	0.0	2.6	1	1	1	3	3	3	1	Phosphoenolpyruvate	phosphomutase
Trp_syntA	PF00290.15	gi|297526318|ref|YP_003668342.1|	-	0.0051	15.3	0.5	0.012	14.2	0.2	1.7	1	1	1	2	2	2	1	Tryptophan	synthase	alpha	chain
TMP-TENI	PF02581.12	gi|297526318|ref|YP_003668342.1|	-	0.016	14.3	0.3	0.028	13.5	0.2	1.3	1	0	0	1	1	1	0	Thiamine	monophosphate	synthase/TENI
FMN_dh	PF01070.13	gi|297526318|ref|YP_003668342.1|	-	0.034	13.0	0.1	0.037	12.8	0.1	1.2	1	0	0	1	1	1	0	FMN-dependent	dehydrogenase
QRPTase_C	PF01729.14	gi|297526318|ref|YP_003668342.1|	-	0.053	13.0	0.2	0.067	12.7	0.1	1.4	1	1	0	1	1	1	0	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
tRNA-synt_1b	PF00579.20	gi|297526319|ref|YP_003668343.1|	-	1.1e-45	156.0	0.0	1.5e-45	155.6	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(W	and	Y)
tRNA-synt_1f	PF01921.13	gi|297526319|ref|YP_003668343.1|	-	0.014	14.0	0.0	0.47	9.0	0.0	2.2	2	0	0	2	2	2	0	tRNA	synthetases	class	I	(K)
Amidohydro_4	PF13147.1	gi|297526320|ref|YP_003668344.1|	-	3.3e-05	24.0	0.0	0.0031	17.5	0.0	2.1	2	0	0	2	2	2	2	Amidohydrolase
Amidohydro_1	PF01979.15	gi|297526320|ref|YP_003668344.1|	-	0.00042	20.0	0.0	0.0024	17.5	0.0	1.9	2	0	0	2	2	2	1	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|297526320|ref|YP_003668344.1|	-	0.013	15.2	0.2	0.029	14.1	0.0	1.7	2	0	0	2	2	2	0	Amidohydrolase
DHBP_synthase	PF00926.14	gi|297526321|ref|YP_003668345.1|	-	1.6e-50	171.0	0.0	1.8e-50	170.8	0.0	1.0	1	0	0	1	1	1	1	3,4-dihydroxy-2-butanone	4-phosphate	synthase
DMRL_synthase	PF00885.14	gi|297526322|ref|YP_003668346.1|	-	2.4e-16	59.6	0.1	2.8e-16	59.4	0.1	1.0	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
DMRL_synthase	PF00885.14	gi|297526323|ref|YP_003668347.1|	-	9.6e-42	142.0	0.1	1.1e-41	141.8	0.1	1.0	1	0	0	1	1	1	1	6,7-dimethyl-8-ribityllumazine	synthase
GGDN	PF05165.7	gi|297526324|ref|YP_003668348.1|	-	3.6e-39	134.2	0.0	5.9e-39	133.5	0.0	1.3	1	1	0	1	1	1	1	GGDN	family
Peptidase_A2E	PF12382.3	gi|297526325|ref|YP_003668349.1|	-	0.0016	18.2	2.1	0.0046	16.7	1.5	1.8	1	0	0	1	1	1	1	Retrotransposon	peptidase
CutA1	PF03091.10	gi|297526326|ref|YP_003668350.1|	-	1.3e-20	72.9	0.0	1.4e-20	72.8	0.0	1.0	1	0	0	1	1	1	1	CutA1	divalent	ion	tolerance	protein
Antitoxin-MazE	PF04014.13	gi|297526327|ref|YP_003668351.1|	-	7.8e-09	35.0	0.0	1e-08	34.7	0.0	1.1	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
TOBE	PF03459.12	gi|297526327|ref|YP_003668351.1|	-	0.035	14.2	0.0	0.042	13.9	0.0	1.1	1	0	0	1	1	1	0	TOBE	domain
CusF_Ec	PF11604.3	gi|297526327|ref|YP_003668351.1|	-	0.044	13.6	0.1	0.049	13.4	0.1	1.1	1	0	0	1	1	1	0	Copper	binding	periplasmic	protein	CusF
B3	PF02362.16	gi|297526327|ref|YP_003668351.1|	-	0.096	12.3	0.1	0.17	11.5	0.1	1.5	1	1	0	1	1	1	0	B3	DNA	binding	domain
SapB_1	PF05184.10	gi|297526328|ref|YP_003668352.1|	-	0.07	12.9	0.2	0.19	11.6	0.0	1.8	2	0	0	2	2	2	0	Saposin-like	type	B,	region	1
DUF3983	PF13137.1	gi|297526330|ref|YP_003668354.1|	-	0.43	10.2	4.1	2.7	7.7	1.7	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3983)
Snf7	PF03357.16	gi|297526331|ref|YP_003668355.1|	-	0.00045	19.6	2.6	0.0007	19.0	1.8	1.5	1	1	0	1	1	1	1	Snf7
MatP	PF06303.7	gi|297526331|ref|YP_003668355.1|	-	0.0047	16.8	0.9	0.01	15.7	0.6	1.5	1	0	0	1	1	1	1	Organiser	of	macrodomain	of	Terminus	of	chromosome
UCH	PF00443.24	gi|297526331|ref|YP_003668355.1|	-	0.013	14.5	0.1	0.016	14.3	0.0	1.1	1	0	0	1	1	1	0	Ubiquitin	carboxyl-terminal	hydrolase
DUF939_C	PF11728.3	gi|297526331|ref|YP_003668355.1|	-	0.11	12.2	3.0	0.27	11.0	0.1	2.5	3	0	0	3	3	3	0	DUF939	C-terminal	domain
LOH1CR12	PF10158.4	gi|297526331|ref|YP_003668355.1|	-	0.14	11.9	1.3	0.22	11.2	0.1	2.0	3	0	0	3	3	3	0	Tumour	suppressor	protein
Peptidase_M41	PF01434.13	gi|297526331|ref|YP_003668355.1|	-	0.31	10.4	2.7	0.72	9.2	0.0	2.2	2	1	0	2	2	2	0	Peptidase	family	M41
K-box	PF01486.12	gi|297526331|ref|YP_003668355.1|	-	0.41	10.4	4.1	5.3	6.8	0.7	3.3	3	1	1	4	4	4	0	K-box	region
ISG65-75	PF11727.3	gi|297526331|ref|YP_003668355.1|	-	4	6.4	6.5	2	7.4	1.1	2.1	2	0	0	2	2	2	0	Invariant	surface	glycoprotein
AIRS_C	PF02769.17	gi|297526333|ref|YP_003668357.1|	-	3.5e-16	59.5	0.1	1.2e-15	57.8	0.0	1.9	2	1	0	2	2	2	1	AIR	synthase	related	protein,	C-terminal	domain
AIRS	PF00586.19	gi|297526333|ref|YP_003668357.1|	-	5e-12	45.9	0.0	1.5e-11	44.4	0.0	1.8	2	0	0	2	2	2	1	AIR	synthase	related	protein,	N-terminal	domain
zf-B_box	PF00643.19	gi|297526334|ref|YP_003668358.1|	-	3.1e-07	30.1	28.2	0.0015	18.3	3.7	3.9	3	1	1	4	4	4	3	B-box	zinc	finger
zf-HIT	PF04438.11	gi|297526334|ref|YP_003668358.1|	-	3.9e-05	23.1	6.3	3.9e-05	23.1	4.3	4.9	2	1	1	3	3	3	1	HIT	zinc	finger
Prok-RING_2	PF14445.1	gi|297526334|ref|YP_003668358.1|	-	0.0044	16.9	23.4	0.26	11.2	4.7	2.5	1	1	1	2	2	2	2	Prokaryotic	RING	finger	family	2
YL1_C	PF08265.6	gi|297526334|ref|YP_003668358.1|	-	1.3	8.6	3.8	0.46	10.0	0.3	2.1	2	0	0	2	2	2	0	YL1	nuclear	protein	C-terminal	domain
TatD_DNase	PF01026.16	gi|297526336|ref|YP_003668360.1|	-	6.7e-19	68.0	0.0	8e-19	67.8	0.0	1.0	1	0	0	1	1	1	1	TatD	related	DNase
GAS	PF13851.1	gi|297526337|ref|YP_003668361.1|	-	9.2e-05	21.7	0.7	9.2e-05	21.7	0.5	1.7	2	0	0	2	2	2	1	Growth-arrest	specific	micro-tubule	binding
Herpes_UL6	PF01763.11	gi|297526337|ref|YP_003668361.1|	-	0.0036	15.5	0.6	0.0047	15.1	0.4	1.2	1	0	0	1	1	1	1	Herpesvirus	UL6	like
RHH_1	PF01402.16	gi|297526337|ref|YP_003668361.1|	-	0.0055	16.5	0.3	0.018	14.9	0.2	2.0	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
PhaP_Bmeg	PF09602.5	gi|297526337|ref|YP_003668361.1|	-	0.013	15.3	0.5	0.068	12.9	0.1	2.0	2	0	0	2	2	2	0	Polyhydroxyalkanoic	acid	inclusion	protein	(PhaP_Bmeg)
NPV_P10	PF05531.7	gi|297526337|ref|YP_003668361.1|	-	0.016	15.4	5.8	0.022	15.0	2.3	2.3	2	1	0	2	2	2	0	Nucleopolyhedrovirus	P10	protein
Lebercilin	PF15619.1	gi|297526337|ref|YP_003668361.1|	-	0.021	14.2	0.7	0.033	13.5	0.5	1.2	1	0	0	1	1	1	0	Ciliary	protein	causing	Leber	congenital	amaurosis	disease
DUF4239	PF14023.1	gi|297526337|ref|YP_003668361.1|	-	0.026	13.8	0.2	0.036	13.4	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4239)
DUF1465	PF07323.7	gi|297526337|ref|YP_003668361.1|	-	0.026	14.0	0.4	0.044	13.3	0.3	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1465)
PMC2NT	PF08066.7	gi|297526337|ref|YP_003668361.1|	-	0.062	13.5	0.1	1.9	8.8	0.0	2.6	2	1	0	2	2	2	0	PMC2NT	(NUC016)	domain
HSBP1	PF06825.7	gi|297526337|ref|YP_003668361.1|	-	0.07	12.7	1.1	0.18	11.4	0.8	1.7	1	0	0	1	1	1	0	Heat	shock	factor	binding	protein	1
DUF4559	PF15112.1	gi|297526337|ref|YP_003668361.1|	-	0.075	12.1	1.8	0.11	11.6	1.2	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4559)
Baculo_PEP_C	PF04513.7	gi|297526337|ref|YP_003668361.1|	-	0.076	12.8	0.2	0.13	12.0	0.1	1.3	1	0	0	1	1	1	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Vps51	PF08700.6	gi|297526337|ref|YP_003668361.1|	-	0.081	12.7	0.9	0.19	11.5	0.6	1.6	1	0	0	1	1	1	0	Vps51/Vps67
DivIC	PF04977.10	gi|297526337|ref|YP_003668361.1|	-	0.13	11.7	3.0	0.22	11.0	0.8	2.2	2	1	0	2	2	2	0	Septum	formation	initiator
Fib_alpha	PF08702.5	gi|297526337|ref|YP_003668361.1|	-	0.16	12.1	2.3	0.28	11.2	1.6	1.4	1	0	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
SlyX	PF04102.7	gi|297526337|ref|YP_003668361.1|	-	0.16	12.3	1.1	0.3	11.4	0.2	2.0	2	1	0	2	2	1	0	SlyX
Seryl_tRNA_N	PF02403.17	gi|297526337|ref|YP_003668361.1|	-	0.51	10.3	5.5	0.25	11.3	1.8	2.0	2	1	0	2	2	2	0	Seryl-tRNA	synthetase	N-terminal	domain
Osmo_CC	PF08946.5	gi|297526337|ref|YP_003668361.1|	-	4.7	7.3	11.6	0.16	12.0	2.4	2.5	2	1	1	3	3	3	0	Osmosensory	transporter	coiled	coil
Lactamase_B_2	PF12706.2	gi|297526338|ref|YP_003668362.1|	-	1.7e-09	37.5	0.0	6.6e-09	35.5	0.0	1.9	2	0	0	2	2	2	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|297526338|ref|YP_003668362.1|	-	1.4e-07	31.3	0.3	2.4e-07	30.6	0.2	1.3	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
DRMBL	PF07522.9	gi|297526338|ref|YP_003668362.1|	-	0.00097	19.1	0.0	0.0024	17.8	0.0	1.6	1	0	0	1	1	1	1	DNA	repair	metallo-beta-lactamase
RMMBL	PF07521.7	gi|297526338|ref|YP_003668362.1|	-	0.004	16.9	0.0	0.015	15.0	0.0	1.9	2	0	0	2	2	2	1	RNA-metabolising	metallo-beta-lactamase
Glucodextran_B	PF09136.5	gi|297526339|ref|YP_003668363.1|	-	0.12	12.5	0.1	0.41	10.8	0.0	1.9	2	0	0	2	2	2	0	Glucodextranase,	domain	B
Pyrophosphatase	PF00719.14	gi|297526340|ref|YP_003668364.1|	-	2e-63	212.5	0.1	2.2e-63	212.3	0.1	1.0	1	0	0	1	1	1	1	Inorganic	pyrophosphatase
FUSC	PF04632.7	gi|297526341|ref|YP_003668365.1|	-	0.00037	19.0	0.0	0.0004	18.9	0.0	1.0	1	0	0	1	1	1	1	Fusaric	acid	resistance	protein	family
Uds1	PF15456.1	gi|297526341|ref|YP_003668365.1|	-	0.01	15.8	7.2	0.042	13.8	4.9	1.7	1	1	1	2	2	2	0	Up-regulated	During	Septation
FliJ	PF02050.11	gi|297526341|ref|YP_003668365.1|	-	0.013	15.5	1.1	0.013	15.5	0.8	2.0	2	0	0	2	2	2	0	Flagellar	FliJ	protein
DUF1993	PF09351.5	gi|297526341|ref|YP_003668365.1|	-	0.014	15.3	0.7	0.36	10.7	0.1	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF1993)
CENP-H	PF05837.7	gi|297526341|ref|YP_003668365.1|	-	0.017	15.2	4.4	0.049	13.8	0.7	2.2	2	0	0	2	2	2	0	Centromere	protein	H	(CENP-H)
DUF721	PF05258.7	gi|297526341|ref|YP_003668365.1|	-	0.028	14.5	0.4	0.057	13.6	0.3	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF721)
TraC_F_IV	PF11130.3	gi|297526341|ref|YP_003668365.1|	-	0.039	13.3	0.4	0.051	13.0	0.3	1.1	1	0	0	1	1	1	0	F	pilus	assembly	Type-IV	secretion	system	for	plasmid	transfer
CENP-Q	PF13094.1	gi|297526341|ref|YP_003668365.1|	-	0.055	13.4	6.4	0.24	11.4	4.4	1.7	1	1	0	1	1	1	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
DUF2408	PF10303.4	gi|297526341|ref|YP_003668365.1|	-	0.061	13.4	5.3	0.13	12.3	3.7	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2408)
Prefoldin	PF02996.12	gi|297526341|ref|YP_003668365.1|	-	0.07	12.7	6.1	0.59	9.7	0.1	2.3	2	1	0	2	2	2	0	Prefoldin	subunit
Orbi_VP6	PF01516.11	gi|297526341|ref|YP_003668365.1|	-	0.084	11.9	2.4	0.11	11.4	1.6	1.3	1	0	0	1	1	1	0	Orbivirus	helicase	VP6
MitMem_reg	PF13012.1	gi|297526341|ref|YP_003668365.1|	-	0.095	12.7	4.6	0.33	11.0	0.6	2.1	1	1	1	2	2	2	0	Maintenance	of	mitochondrial	structure	and	function
DHC_N2	PF08393.8	gi|297526341|ref|YP_003668365.1|	-	0.097	11.1	2.8	0.16	10.4	1.8	1.3	1	1	0	1	1	1	0	Dynein	heavy	chain,	N-terminal	region	2
RasGAP_C	PF03836.10	gi|297526341|ref|YP_003668365.1|	-	0.12	12.0	4.8	0.089	12.4	0.4	2.0	1	1	1	2	2	2	0	RasGAP	C-terminus
V_ATPase_I	PF01496.14	gi|297526341|ref|YP_003668365.1|	-	0.13	10.1	2.4	0.15	9.8	1.7	1.2	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
BLOC1_2	PF10046.4	gi|297526341|ref|YP_003668365.1|	-	0.13	12.3	5.6	3.5	7.8	0.2	2.5	1	1	1	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Tn7_Tnp_TnsA_C	PF08721.6	gi|297526341|ref|YP_003668365.1|	-	0.16	11.9	1.3	4	7.5	0.1	2.8	2	1	0	3	3	3	0	TnsA	endonuclease	C	terminal
COG2	PF06148.6	gi|297526341|ref|YP_003668365.1|	-	0.16	11.8	5.0	0.19	11.5	0.4	2.1	1	1	1	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
ABC_tran_2	PF12848.2	gi|297526341|ref|YP_003668365.1|	-	0.17	11.7	2.6	0.38	10.6	0.1	2.1	2	0	0	2	2	2	0	ABC	transporter
OmpH	PF03938.9	gi|297526341|ref|YP_003668365.1|	-	0.2	11.6	3.6	0.27	11.1	2.5	1.2	1	0	0	1	1	1	0	Outer	membrane	protein	(OmpH-like)
RmuC	PF02646.11	gi|297526341|ref|YP_003668365.1|	-	0.22	10.3	5.9	0.25	10.1	1.7	2.0	1	1	1	2	2	2	0	RmuC	family
Syntaxin	PF00804.20	gi|297526341|ref|YP_003668365.1|	-	0.23	11.6	8.3	3.5	7.8	5.8	2.1	1	1	0	1	1	1	0	Syntaxin
Baculo_PEP_C	PF04513.7	gi|297526341|ref|YP_003668365.1|	-	0.23	11.2	3.5	9.5	6.0	2.4	2.2	1	1	0	1	1	1	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
DUF342	PF03961.8	gi|297526341|ref|YP_003668365.1|	-	0.28	9.5	7.4	0.97	7.7	5.1	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
Nup54	PF13874.1	gi|297526341|ref|YP_003668365.1|	-	0.29	10.8	6.2	3.5	7.3	4.2	2.1	1	1	0	1	1	1	0	Nucleoporin	complex	subunit	54
APG6	PF04111.7	gi|297526341|ref|YP_003668365.1|	-	0.32	10.0	4.3	0.44	9.5	3.0	1.2	1	0	0	1	1	1	0	Autophagy	protein	Apg6
GAS	PF13851.1	gi|297526341|ref|YP_003668365.1|	-	0.37	9.9	8.3	0.35	10.0	2.6	1.9	1	1	0	2	2	2	0	Growth-arrest	specific	micro-tubule	binding
Seryl_tRNA_N	PF02403.17	gi|297526341|ref|YP_003668365.1|	-	0.43	10.6	6.8	2.3	8.2	0.1	2.1	1	1	1	2	2	2	0	Seryl-tRNA	synthetase	N-terminal	domain
DivIVA	PF05103.8	gi|297526341|ref|YP_003668365.1|	-	0.54	10.3	5.7	2.9	7.9	4.0	2.1	1	1	0	1	1	1	0	DivIVA	protein
AAA_23	PF13476.1	gi|297526341|ref|YP_003668365.1|	-	0.8	10.0	5.1	1.1	9.5	3.5	1.2	1	0	0	1	1	1	0	AAA	domain
Occludin_ELL	PF07303.8	gi|297526341|ref|YP_003668365.1|	-	0.88	10.3	4.3	4	8.2	0.8	2.1	1	1	0	2	2	2	0	Occludin	homology	domain
DASH_Dad3	PF08656.5	gi|297526341|ref|YP_003668365.1|	-	0.96	9.1	5.7	15	5.3	1.3	2.7	2	1	0	2	2	2	0	DASH	complex	subunit	Dad3
MerR-DNA-bind	PF09278.6	gi|297526341|ref|YP_003668365.1|	-	1.2	9.5	0.1	1.2	9.5	0.0	2.8	2	1	0	2	2	1	0	MerR,	DNA	binding
CorA	PF01544.13	gi|297526341|ref|YP_003668365.1|	-	1.3	8.0	5.6	1.9	7.4	3.9	1.2	1	0	0	1	1	1	0	CorA-like	Mg2+	transporter	protein
IncA	PF04156.9	gi|297526341|ref|YP_003668365.1|	-	1.9	8.0	9.7	5.2	6.6	6.8	1.7	1	1	0	1	1	1	0	IncA	protein
DUF972	PF06156.8	gi|297526341|ref|YP_003668365.1|	-	2.4	8.5	5.8	2.8	8.3	1.3	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF972)
Fzo_mitofusin	PF04799.8	gi|297526341|ref|YP_003668365.1|	-	2.6	7.4	6.1	5.8	6.2	0.2	2.1	1	1	0	2	2	2	0	fzo-like	conserved	region
Pox_A_type_inc	PF04508.7	gi|297526341|ref|YP_003668365.1|	-	3	7.8	8.0	0.42	10.5	1.0	2.6	2	0	0	2	2	2	0	Viral	A-type	inclusion	protein	repeat
Fib_alpha	PF08702.5	gi|297526341|ref|YP_003668365.1|	-	3.4	7.7	6.3	7.8	6.6	4.4	1.7	1	1	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
CoA_binding	PF02629.14	gi|297526342|ref|YP_003668366.1|	-	2.8e-30	104.6	3.2	2.8e-29	101.4	1.1	2.4	2	0	0	2	2	2	1	CoA	binding	domain
Ligase_CoA	PF00549.14	gi|297526342|ref|YP_003668366.1|	-	6.8e-16	58.2	0.0	1.1e-15	57.5	0.0	1.3	1	0	0	1	1	1	1	CoA-ligase
Succ_CoA_lig	PF13607.1	gi|297526342|ref|YP_003668366.1|	-	1.7e-15	56.8	0.0	1.5e-14	53.7	0.0	2.0	2	0	0	2	2	2	1	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding_2	PF13380.1	gi|297526342|ref|YP_003668366.1|	-	5e-08	33.1	0.0	4.4e-07	30.0	0.0	2.1	2	0	0	2	2	2	1	CoA	binding	domain
IlvN	PF07991.7	gi|297526342|ref|YP_003668366.1|	-	0.0024	17.2	0.4	0.0043	16.4	0.3	1.3	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
Radical_SAM	PF04055.16	gi|297526342|ref|YP_003668366.1|	-	0.084	13.0	0.1	0.33	11.0	0.0	1.9	2	0	0	2	2	2	0	Radical	SAM	superfamily
DapB_N	PF01113.15	gi|297526342|ref|YP_003668366.1|	-	0.093	12.6	0.8	0.16	11.8	0.6	1.4	1	0	0	1	1	1	0	Dihydrodipicolinate	reductase,	N-terminus
GFO_IDH_MocA	PF01408.17	gi|297526342|ref|YP_003668366.1|	-	0.1	13.1	0.1	0.26	11.8	0.1	1.7	2	0	0	2	2	2	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
ATP-grasp_2	PF08442.5	gi|297526343|ref|YP_003668367.1|	-	3.1e-57	193.2	0.1	5.9e-57	192.3	0.0	1.5	1	0	0	1	1	1	1	ATP-grasp	domain
Ligase_CoA	PF00549.14	gi|297526343|ref|YP_003668367.1|	-	1.6e-18	66.7	0.2	2.5e-18	66.1	0.2	1.3	1	0	0	1	1	1	1	CoA-ligase
ATP-grasp_5	PF13549.1	gi|297526343|ref|YP_003668367.1|	-	8.6e-09	34.9	0.2	4.3e-08	32.6	0.1	2.0	1	1	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|297526343|ref|YP_003668367.1|	-	3.4e-06	26.9	0.0	6.4e-06	26.0	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
GARS_A	PF01071.14	gi|297526343|ref|YP_003668367.1|	-	1.7e-05	24.4	0.5	3.7e-05	23.3	0.1	1.7	2	0	0	2	2	2	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATP-grasp	PF02222.17	gi|297526343|ref|YP_003668367.1|	-	0.0029	16.9	0.0	0.0053	16.1	0.0	1.4	1	0	0	1	1	1	1	ATP-grasp	domain
CPSase_L_D2	PF02786.12	gi|297526343|ref|YP_003668367.1|	-	0.015	14.5	0.1	0.025	13.8	0.0	1.3	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Peripla_BP_4	PF13407.1	gi|297526343|ref|YP_003668367.1|	-	0.023	14.0	0.0	0.035	13.4	0.0	1.4	1	0	0	1	1	1	0	Periplasmic	binding	protein	domain
DUF3198	PF11433.3	gi|297526343|ref|YP_003668367.1|	-	0.044	13.6	0.2	0.18	11.7	0.1	2.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3198)
Dak1	PF02733.12	gi|297526343|ref|YP_003668367.1|	-	0.05	12.1	1.3	14	4.0	0.0	3.4	4	0	0	4	4	4	0	Dak1	domain
Succ_CoA_lig	PF13607.1	gi|297526343|ref|YP_003668367.1|	-	0.065	12.8	0.0	0.098	12.2	0.0	1.3	1	0	0	1	1	1	0	Succinyl-CoA	ligase	like	flavodoxin	domain
DUF3629	PF12302.3	gi|297526346|ref|YP_003668370.1|	-	0.13	11.5	1.1	0.23	10.7	0.8	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3629)
Clr5	PF14420.1	gi|297526346|ref|YP_003668370.1|	-	1.8	8.5	5.4	11	6.0	0.1	3.6	4	0	0	4	4	4	0	Clr5	domain
PfkB	PF00294.19	gi|297526347|ref|YP_003668371.1|	-	1.1e-39	136.4	0.0	1.5e-39	135.9	0.0	1.0	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
PNP_UDP_1	PF01048.15	gi|297526348|ref|YP_003668372.1|	-	4e-40	137.2	0.2	5.1e-40	136.9	0.1	1.1	1	0	0	1	1	1	1	Phosphorylase	superfamily
DUF4258	PF14076.1	gi|297526349|ref|YP_003668373.1|	-	4e-09	36.3	0.0	6e-09	35.7	0.0	1.3	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4258)
DUF3993	PF13158.1	gi|297526349|ref|YP_003668373.1|	-	0.031	14.0	0.0	0.043	13.6	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3993)
Fork_head	PF00250.13	gi|297526349|ref|YP_003668373.1|	-	0.032	14.2	0.2	0.044	13.8	0.1	1.3	1	0	0	1	1	1	0	Fork	head	domain
CompInhib_SCIN	PF11546.3	gi|297526349|ref|YP_003668373.1|	-	0.14	12.0	0.1	0.2	11.4	0.0	1.3	1	0	0	1	1	1	0	Staphylococcal	complement	inhibitor	SCIN
Lipid_DES	PF08557.5	gi|297526349|ref|YP_003668373.1|	-	0.14	11.4	1.0	0.29	10.4	0.3	1.7	2	0	0	2	2	2	0	Sphingolipid	Delta4-desaturase	(DES)
Metallophos_2	PF12850.2	gi|297526350|ref|YP_003668374.1|	-	3.6e-28	98.3	0.1	4.1e-28	98.2	0.1	1.0	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|297526350|ref|YP_003668374.1|	-	2.2e-08	33.7	3.8	8.2e-08	31.8	2.6	1.8	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
HSP20	PF00011.16	gi|297526351|ref|YP_003668375.1|	-	4.1e-12	45.8	2.3	1.6e-10	40.7	1.6	2.2	1	1	0	1	1	1	1	Hsp20/alpha	crystallin	family
GvpH	PF05455.6	gi|297526351|ref|YP_003668375.1|	-	1.5e-06	27.9	0.1	1.8e-06	27.7	0.0	1.1	1	0	0	1	1	1	1	GvpH
CS	PF04969.11	gi|297526351|ref|YP_003668375.1|	-	3e-06	27.6	0.3	4.6e-06	27.0	0.2	1.2	1	0	0	1	1	1	1	CS	domain
DPCD	PF14913.1	gi|297526351|ref|YP_003668375.1|	-	0.019	14.0	0.3	0.061	12.4	0.1	1.8	1	1	0	2	2	2	0	DPCD	protein	family
RibD_C	PF01872.12	gi|297526352|ref|YP_003668376.1|	-	1.3e-38	132.6	0.0	1.5e-38	132.3	0.0	1.0	1	0	0	1	1	1	1	RibD	C-terminal	domain
UPF0047	PF01894.12	gi|297526353|ref|YP_003668377.1|	-	4e-35	120.1	0.1	4.6e-35	119.9	0.0	1.0	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0047
QRPTase_C	PF01729.14	gi|297526354|ref|YP_003668378.1|	-	1.1e-26	93.4	0.0	1.4e-26	93.0	0.0	1.2	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	C-terminal	domain
QRPTase_N	PF02749.11	gi|297526354|ref|YP_003668378.1|	-	7.5e-06	25.6	0.0	1.3e-05	24.8	0.0	1.4	1	0	0	1	1	1	1	Quinolinate	phosphoribosyl	transferase,	N-terminal	domain
Ribosomal_S2	PF00318.15	gi|297526354|ref|YP_003668378.1|	-	0.09	11.9	0.0	0.17	11.0	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	protein	S2
HAD_2	PF13419.1	gi|297526355|ref|YP_003668379.1|	-	1.7e-20	73.9	0.0	2.2e-20	73.5	0.0	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|297526355|ref|YP_003668379.1|	-	0.0018	18.7	0.0	0.35	11.2	0.0	2.1	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
DUF2608	PF11019.3	gi|297526355|ref|YP_003668379.1|	-	0.03	13.2	0.1	0.56	9.1	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2608)
ThiS	PF02597.15	gi|297526356|ref|YP_003668380.1|	-	2e-12	47.3	0.1	2.3e-12	47.1	0.1	1.1	1	0	0	1	1	1	1	ThiS	family
ThiS-like	PF14453.1	gi|297526356|ref|YP_003668380.1|	-	0.0025	17.6	2.6	0.045	13.5	1.8	2.1	1	1	0	1	1	1	1	ThiS-like	ubiquitin
Ub-Mut7C	PF14451.1	gi|297526356|ref|YP_003668380.1|	-	0.013	14.9	0.1	0.032	13.7	0.0	1.6	2	0	0	2	2	2	0	Mut7-C	ubiquitin
TGS	PF02824.16	gi|297526356|ref|YP_003668380.1|	-	0.028	14.2	0.1	0.044	13.6	0.1	1.3	1	0	0	1	1	1	0	TGS	domain
S4	PF01479.20	gi|297526356|ref|YP_003668380.1|	-	0.035	13.5	0.3	0.069	12.6	0.2	1.5	1	0	0	1	1	1	0	S4	domain
ATPgrasp_ST	PF14397.1	gi|297526356|ref|YP_003668380.1|	-	0.051	12.6	0.0	0.061	12.4	0.0	1.1	1	0	0	1	1	1	0	Sugar-transfer	associated	ATP-grasp
MoaE	PF02391.12	gi|297526357|ref|YP_003668381.1|	-	2.5e-25	88.5	0.2	2.9e-25	88.3	0.1	1.1	1	0	0	1	1	1	1	MoaE	protein
Metallophos_3	PF14582.1	gi|297526359|ref|YP_003668383.1|	-	4.5e-12	45.6	0.1	4.6e-05	22.7	0.0	2.1	2	0	0	2	2	2	2	Metallophosphoesterase,	calcineurin	superfamily
Metallophos_2	PF12850.2	gi|297526359|ref|YP_003668383.1|	-	2.2e-05	24.3	0.0	3.1e-05	23.8	0.0	1.3	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
AP_endonuc_2	PF01261.19	gi|297526360|ref|YP_003668384.1|	-	1.9e-09	37.1	0.0	8.1e-09	35.0	0.0	1.8	2	0	0	2	2	2	1	Xylose	isomerase-like	TIM	barrel
DUF1194	PF06707.6	gi|297526360|ref|YP_003668384.1|	-	0.074	12.0	0.0	0.12	11.3	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1194)
ResIII	PF04851.10	gi|297526361|ref|YP_003668385.1|	-	1.1e-19	70.9	0.3	4.3e-18	65.8	0.2	2.8	2	1	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
DEAD	PF00270.24	gi|297526361|ref|YP_003668385.1|	-	1.5e-19	70.1	0.0	1.1e-18	67.3	0.0	2.3	3	0	0	3	3	3	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|297526361|ref|YP_003668385.1|	-	1.4e-13	50.4	0.0	4.9e-11	42.3	0.0	2.5	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
HTH_24	PF13412.1	gi|297526361|ref|YP_003668385.1|	-	1.8e-05	23.9	0.1	5.9e-05	22.3	0.0	2.0	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
AAA_22	PF13401.1	gi|297526361|ref|YP_003668385.1|	-	0.00024	21.2	0.0	0.0013	18.9	0.0	2.2	1	0	0	1	1	1	1	AAA	domain
PhoH	PF02562.11	gi|297526361|ref|YP_003668385.1|	-	0.0013	18.0	0.0	0.0032	16.7	0.0	1.6	1	0	0	1	1	1	1	PhoH-like	protein
Sulfolobus_pRN	PF05584.6	gi|297526361|ref|YP_003668385.1|	-	0.0016	18.3	0.0	0.0053	16.6	0.0	1.9	1	0	0	1	1	1	1	Sulfolobus	plasmid	regulatory	protein
TrmB	PF01978.14	gi|297526361|ref|YP_003668385.1|	-	0.003	17.2	0.0	0.0069	16.0	0.0	1.6	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
SNF2_N	PF00176.18	gi|297526361|ref|YP_003668385.1|	-	0.0044	15.8	0.1	0.015	14.1	0.1	1.9	2	1	0	2	2	2	1	SNF2	family	N-terminal	domain
Flavi_DEAD	PF07652.9	gi|297526361|ref|YP_003668385.1|	-	0.0056	16.4	0.3	0.019	14.7	0.2	1.9	1	1	0	1	1	1	1	Flavivirus	DEAD	domain
AAA_11	PF13086.1	gi|297526361|ref|YP_003668385.1|	-	0.013	15.0	0.2	2	7.8	0.0	2.4	1	1	1	2	2	2	0	AAA	domain
DUF87	PF01935.12	gi|297526361|ref|YP_003668385.1|	-	0.014	15.2	0.5	0.74	9.5	0.1	3.1	3	1	0	3	3	3	0	Domain	of	unknown	function	DUF87
MarR_2	PF12802.2	gi|297526361|ref|YP_003668385.1|	-	0.019	14.6	0.0	0.058	13.0	0.0	1.8	1	0	0	1	1	1	0	MarR	family
HTH_5	PF01022.15	gi|297526361|ref|YP_003668385.1|	-	0.022	14.4	0.0	0.043	13.4	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
DUF2075	PF09848.4	gi|297526361|ref|YP_003668385.1|	-	0.022	13.7	0.0	0.081	11.8	0.0	1.8	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
GntR	PF00392.16	gi|297526361|ref|YP_003668385.1|	-	0.023	14.1	0.0	0.094	12.1	0.0	2.0	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
HAD_2	PF13419.1	gi|297526361|ref|YP_003668385.1|	-	0.089	13.0	0.2	37	4.4	0.0	3.3	2	1	1	3	3	3	0	Haloacid	dehalogenase-like	hydrolase
HTH_36	PF13730.1	gi|297526361|ref|YP_003668385.1|	-	0.11	12.6	0.0	0.33	11.1	0.0	1.8	1	0	0	1	1	1	0	Helix-turn-helix	domain
TK	PF00265.13	gi|297526361|ref|YP_003668385.1|	-	0.16	11.5	0.0	0.36	10.3	0.0	1.6	1	0	0	1	1	1	0	Thymidine	kinase
Succ_CoA_lig	PF13607.1	gi|297526363|ref|YP_003668387.1|	-	7.2e-53	177.8	0.6	5.7e-52	174.9	0.1	2.5	3	0	0	3	3	3	1	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding_2	PF13380.1	gi|297526363|ref|YP_003668387.1|	-	1.5e-26	92.8	0.1	7.9e-26	90.5	0.1	2.2	2	0	0	2	2	2	1	CoA	binding	domain
CoA_binding	PF02629.14	gi|297526363|ref|YP_003668387.1|	-	1.3e-20	73.6	0.5	1e-19	70.8	0.3	2.5	2	0	0	2	2	2	1	CoA	binding	domain
GFO_IDH_MocA	PF01408.17	gi|297526363|ref|YP_003668387.1|	-	0.026	15.0	0.0	0.27	11.7	0.0	2.7	3	0	0	3	3	3	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
tRNA_bind	PF01588.15	gi|297526364|ref|YP_003668388.1|	-	1.8e-26	91.8	0.0	2e-26	91.6	0.0	1.0	1	0	0	1	1	1	1	Putative	tRNA	binding	domain
ThiI	PF02568.9	gi|297526365|ref|YP_003668389.1|	-	3.2e-37	127.9	0.0	5.6e-37	127.1	0.0	1.4	1	0	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
THUMP	PF02926.12	gi|297526365|ref|YP_003668389.1|	-	2.2e-06	27.5	0.3	5.3e-06	26.3	0.2	1.6	1	0	0	1	1	1	1	THUMP	domain
QueC	PF06508.8	gi|297526365|ref|YP_003668389.1|	-	2.3e-05	23.7	0.0	0.001	18.3	0.0	2.4	1	1	0	1	1	1	1	Queuosine	biosynthesis	protein	QueC
tRNA_Me_trans	PF03054.11	gi|297526365|ref|YP_003668389.1|	-	0.00032	19.3	0.0	0.00078	18.0	0.0	1.5	2	0	0	2	2	2	1	tRNA	methyl	transferase
Asn_synthase	PF00733.16	gi|297526365|ref|YP_003668389.1|	-	0.082	12.3	0.0	0.15	11.5	0.0	1.4	1	0	0	1	1	1	0	Asparagine	synthase
TYW3	PF02676.9	gi|297526366|ref|YP_003668390.1|	-	5.6e-45	152.9	0.0	6.5e-45	152.7	0.0	1.0	1	0	0	1	1	1	1	Methyltransferase	TYW3
tRNA_deacylase	PF04414.7	gi|297526367|ref|YP_003668391.1|	-	4.6e-61	205.6	0.1	5.9e-61	205.2	0.0	1.1	1	0	0	1	1	1	1	D-aminoacyl-tRNA	deacylase
CARDB	PF07705.6	gi|297526368|ref|YP_003668392.1|	-	3.9e-06	26.8	0.0	2.7e-05	24.1	0.0	2.2	2	0	0	2	2	2	1	CARDB
DUF3324	PF11797.3	gi|297526368|ref|YP_003668392.1|	-	0.0062	16.2	1.1	0.029	14.0	0.7	2.1	1	1	0	1	1	1	1	Protein	of	unknown	function	C-terminal	(DUF3324)
DUF1469	PF07332.6	gi|297526369|ref|YP_003668393.1|	-	0.01	15.5	0.7	0.01	15.5	0.5	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1469)
Cation_efflux	PF01545.16	gi|297526369|ref|YP_003668393.1|	-	0.054	12.5	0.5	0.057	12.4	0.3	1.0	1	0	0	1	1	1	0	Cation	efflux	family
RseC_MucC	PF04246.7	gi|297526369|ref|YP_003668393.1|	-	0.057	12.9	0.4	0.077	12.5	0.3	1.3	1	0	0	1	1	1	0	Positive	regulator	of	sigma(E),	RseC/MucC
MadM	PF03818.8	gi|297526369|ref|YP_003668393.1|	-	0.13	11.8	3.1	0.17	11.4	2.1	1.2	1	0	0	1	1	1	0	Malonate/sodium	symporter	MadM	subunit
DUF1049	PF06305.6	gi|297526369|ref|YP_003668393.1|	-	0.35	10.3	5.5	2.9	7.4	1.3	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1049)
DUF1656	PF07869.7	gi|297526369|ref|YP_003668393.1|	-	2	8.2	4.7	0.7	9.7	0.1	2.1	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1656)
DUF3040	PF11239.3	gi|297526369|ref|YP_003668393.1|	-	7.9	6.6	6.1	5.5	7.1	0.3	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3040)
DUF3683	PF12447.3	gi|297526370|ref|YP_003668394.1|	-	0.0024	17.6	0.4	0.0063	16.3	0.1	1.7	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF3683)
DUF58	PF01882.13	gi|297526371|ref|YP_003668395.1|	-	2.3e-24	85.3	0.0	6.1e-24	83.9	0.0	1.8	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF58
DUF981	PF06168.6	gi|297526371|ref|YP_003668395.1|	-	0.041	13.6	2.7	0.068	12.9	1.8	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF981)
AAA_3	PF07726.6	gi|297526372|ref|YP_003668396.1|	-	2.2e-62	208.4	0.0	3.3e-62	207.8	0.0	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_5	PF07728.9	gi|297526372|ref|YP_003668396.1|	-	2.7e-15	56.3	0.0	4.6e-15	55.5	0.0	1.4	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
MCM	PF00493.18	gi|297526372|ref|YP_003668396.1|	-	4.8e-08	32.1	0.0	2e-07	30.1	0.0	2.2	1	1	0	1	1	1	1	MCM2/3/5	family
AAA	PF00004.24	gi|297526372|ref|YP_003668396.1|	-	5.6e-08	33.0	0.0	1.3e-07	31.8	0.0	1.7	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Mg_chelatase	PF01078.16	gi|297526372|ref|YP_003668396.1|	-	9.4e-07	28.1	0.5	0.0094	15.1	0.0	2.9	3	0	0	3	3	3	2	Magnesium	chelatase,	subunit	ChlI
RuvB_N	PF05496.7	gi|297526372|ref|YP_003668396.1|	-	8e-05	21.7	0.2	0.00033	19.7	0.1	1.9	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
Sigma54_activat	PF00158.21	gi|297526372|ref|YP_003668396.1|	-	9.6e-05	21.9	0.0	0.025	14.0	0.0	2.2	2	0	0	2	2	2	2	Sigma-54	interaction	domain
AAA_2	PF07724.9	gi|297526372|ref|YP_003668396.1|	-	0.0028	17.5	0.0	0.0047	16.8	0.0	1.3	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
TIP49	PF06068.8	gi|297526372|ref|YP_003668396.1|	-	0.3	9.7	2.4	1.6	7.3	0.1	2.6	2	1	1	3	3	3	0	TIP49	C-terminus
DUF4350	PF14258.1	gi|297526373|ref|YP_003668397.1|	-	0.002	18.2	0.0	0.0041	17.3	0.0	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4350)
TrkA_N	PF02254.13	gi|297526373|ref|YP_003668397.1|	-	0.096	12.6	0.6	0.85	9.6	0.0	2.6	2	1	0	2	2	2	0	TrkA-N	domain
DUF4129	PF13559.1	gi|297526374|ref|YP_003668398.1|	-	1.6e-07	31.1	0.0	2.3e-07	30.6	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4129)
CLTH	PF10607.4	gi|297526374|ref|YP_003668398.1|	-	0.0014	18.3	2.8	0.0047	16.6	2.1	1.7	1	1	0	1	1	1	1	CTLH/CRA	C-terminal	to	LisH	motif	domain
HSCB_C	PF07743.8	gi|297526374|ref|YP_003668398.1|	-	0.13	12.7	0.2	0.3	11.5	0.1	1.6	1	0	0	1	1	1	0	HSCB	C-terminal	oligomerisation	domain
BtpA	PF03437.10	gi|297526375|ref|YP_003668399.1|	-	7.3e-69	231.8	0.0	8.4e-69	231.6	0.0	1.0	1	0	0	1	1	1	1	BtpA	family
PcrB	PF01884.12	gi|297526375|ref|YP_003668399.1|	-	0.00099	18.4	1.0	0.0032	16.7	0.4	1.9	2	1	1	3	3	3	1	PcrB	family
Bac_DNA_binding	PF00216.16	gi|297526376|ref|YP_003668400.1|	-	0.068	13.2	1.6	0.47	10.5	0.2	2.5	2	1	1	3	3	3	0	Bacterial	DNA-binding	protein
CxxCxxCC	PF03692.10	gi|297526377|ref|YP_003668401.1|	-	2.4e-11	43.9	0.3	3.9e-11	43.2	0.2	1.3	1	0	0	1	1	1	1	Putative	zinc-	or	iron-chelating	domain
AF0941-like	PF14591.1	gi|297526377|ref|YP_003668401.1|	-	0.09	12.8	0.0	0.12	12.4	0.0	1.2	1	0	0	1	1	1	0	AF0941-like
AFT	PF08731.6	gi|297526378|ref|YP_003668402.1|	-	0.05	13.8	0.4	0.062	13.5	0.3	1.1	1	0	0	1	1	1	0	Transcription	factor	AFT
Peptidase_S8	PF00082.17	gi|297526379|ref|YP_003668403.1|	-	4.1e-33	114.7	4.6	1.1e-25	90.4	0.5	2.9	2	0	0	2	2	2	2	Subtilase	family
Big_1	PF02369.11	gi|297526379|ref|YP_003668403.1|	-	2.6e-16	59.3	0.1	0.00018	21.3	0.0	7.8	6	1	0	7	7	7	2	Bacterial	Ig-like	domain	(group	1)
DUF4198	PF10670.4	gi|297526379|ref|YP_003668403.1|	-	0.0026	17.8	0.0	0.052	13.5	0.0	2.9	3	0	0	3	3	3	1	Domain	of	unknown	function	(DUF4198)
Carb_kinase	PF01256.12	gi|297526380|ref|YP_003668404.1|	-	3.6e-52	177.0	0.1	5.4e-52	176.4	0.0	1.2	1	0	0	1	1	1	1	Carbohydrate	kinase
YjeF_N	PF03853.10	gi|297526380|ref|YP_003668404.1|	-	1e-40	139.1	0.0	2.5e-40	137.8	0.0	1.6	1	0	0	1	1	1	1	YjeF-related	protein	N-terminus
HK	PF02110.10	gi|297526380|ref|YP_003668404.1|	-	6.8e-06	25.4	0.1	1.5e-05	24.3	0.1	1.5	1	0	0	1	1	1	1	Hydroxyethylthiazole	kinase	family
PfkB	PF00294.19	gi|297526380|ref|YP_003668404.1|	-	0.031	13.4	0.0	0.055	12.5	0.0	1.4	1	0	0	1	1	1	0	pfkB	family	carbohydrate	kinase
FANCI_HD2	PF14680.1	gi|297526381|ref|YP_003668405.1|	-	0.006	15.7	0.0	0.0084	15.2	0.0	1.2	1	0	0	1	1	1	1	FANCI	helical	domain	2
DUF1402	PF07182.6	gi|297526382|ref|YP_003668406.1|	-	0.054	12.3	0.0	0.085	11.7	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1402)
Mucin	PF01456.12	gi|297526383|ref|YP_003668407.1|	-	1.2e-05	25.1	17.1	2.7e-05	23.9	12.1	1.4	2	0	0	2	2	2	1	Mucin-like	glycoprotein
ODV-E18	PF10717.4	gi|297526383|ref|YP_003668407.1|	-	0.012	14.9	1.0	0.012	14.9	0.7	2.7	4	0	0	4	4	4	0	Occlusion-derived	virus	envelope	protein	ODV-E18
Rifin_STEVOR	PF02009.11	gi|297526383|ref|YP_003668407.1|	-	0.032	13.8	0.3	0.054	13.1	0.2	1.4	1	0	0	1	1	1	0	Rifin/stevor	family
MGC-24	PF05283.6	gi|297526383|ref|YP_003668407.1|	-	0.15	11.8	16.0	0.22	11.2	11.1	1.2	1	0	0	1	1	1	0	Multi-glycosylated	core	protein	24	(MGC-24)
AJAP1_PANP_C	PF15298.1	gi|297526383|ref|YP_003668407.1|	-	0.51	10.1	16.2	0.79	9.5	11.2	1.3	1	0	0	1	1	1	0	AJAP1/PANP	C-terminus
TMEM154	PF15102.1	gi|297526383|ref|YP_003668407.1|	-	2.8	7.6	13.7	1.1	8.9	7.4	1.8	2	0	0	2	2	2	0	TMEM154	protein	family
MarR_2	PF12802.2	gi|297526384|ref|YP_003668408.1|	-	3.7e-07	29.7	0.0	7e-07	28.8	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_27	PF13463.1	gi|297526384|ref|YP_003668408.1|	-	5.1e-05	23.5	0.1	0.00011	22.5	0.1	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_IclR	PF09339.5	gi|297526384|ref|YP_003668408.1|	-	0.00013	21.4	0.0	0.00027	20.4	0.0	1.5	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
ODV-E18	PF10717.4	gi|297526384|ref|YP_003668408.1|	-	0.00055	19.3	0.2	0.00055	19.3	0.1	2.0	2	0	0	2	2	2	1	Occlusion-derived	virus	envelope	protein	ODV-E18
HTH_24	PF13412.1	gi|297526384|ref|YP_003668408.1|	-	0.00057	19.2	0.0	0.0014	17.9	0.0	1.8	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
MarR	PF01047.17	gi|297526384|ref|YP_003668408.1|	-	0.0018	17.9	0.0	0.0041	16.7	0.0	1.5	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|297526384|ref|YP_003668408.1|	-	0.0028	17.3	0.3	0.0068	16.0	0.2	1.6	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
Fe_dep_repress	PF01325.14	gi|297526384|ref|YP_003668408.1|	-	0.049	13.5	0.0	0.11	12.4	0.0	1.6	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_38	PF13936.1	gi|297526384|ref|YP_003668408.1|	-	0.1	12.1	0.1	0.21	11.1	0.1	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
LEA_5	PF00477.12	gi|297526384|ref|YP_003668408.1|	-	0.15	12.3	0.1	0.25	11.6	0.1	1.3	1	0	0	1	1	1	0	Small	hydrophilic	plant	seed	protein
DNA_primase_lrg	PF04104.9	gi|297526386|ref|YP_003668410.1|	-	6.3e-35	120.6	0.3	9e-35	120.1	0.2	1.3	1	0	0	1	1	1	1	Eukaryotic	and	archaeal	DNA	primase,	large	subunit
Transposase_22	PF02994.9	gi|297526386|ref|YP_003668410.1|	-	0.00067	18.2	0.3	0.00099	17.6	0.2	1.2	1	0	0	1	1	1	1	L1	transposable	element
DUF1212	PF06738.7	gi|297526387|ref|YP_003668411.1|	-	0.00012	21.6	3.5	0.00012	21.6	2.4	1.7	2	1	0	2	2	2	1	Protein	of	unknown	function	(DUF1212)
PAP2	PF01569.16	gi|297526387|ref|YP_003668411.1|	-	0.00024	20.7	12.0	0.00024	20.7	8.3	2.3	1	1	1	2	2	2	1	PAP2	superfamily
ARL6IP6	PF15062.1	gi|297526387|ref|YP_003668411.1|	-	0.35	10.8	2.8	0.2	11.6	0.3	1.8	2	0	0	2	2	2	0	Haemopoietic	lineage	transmembrane	helix
Pox_A21	PF05323.7	gi|297526388|ref|YP_003668412.1|	-	0.064	13.6	0.1	0.064	13.6	0.1	2.4	2	0	0	2	2	2	0	Poxvirus	A21	Protein
Nol1_Nop2_Fmu	PF01189.12	gi|297526389|ref|YP_003668413.1|	-	6.9e-46	156.8	0.0	9.3e-46	156.4	0.0	1.1	1	0	0	1	1	1	1	NOL1/NOP2/sun	family
Methyltransf_26	PF13659.1	gi|297526389|ref|YP_003668413.1|	-	3.2e-10	40.0	0.0	5.7e-10	39.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
FtsJ	PF01728.14	gi|297526389|ref|YP_003668413.1|	-	2.4e-05	24.3	0.0	5.9e-05	23.1	0.0	1.6	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
Methyltransf_18	PF12847.2	gi|297526389|ref|YP_003668413.1|	-	0.00065	20.2	0.0	0.0014	19.1	0.0	1.6	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|297526389|ref|YP_003668413.1|	-	0.0013	18.2	0.0	0.0023	17.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|297526389|ref|YP_003668413.1|	-	0.01	15.2	0.0	0.017	14.4	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	small	domain
Cons_hypoth95	PF03602.10	gi|297526389|ref|YP_003668413.1|	-	0.1	12.0	0.0	0.17	11.2	0.0	1.3	1	0	0	1	1	1	0	Conserved	hypothetical	protein	95
GCD14	PF08704.5	gi|297526389|ref|YP_003668413.1|	-	0.18	11.2	0.0	0.29	10.5	0.0	1.2	1	0	0	1	1	1	0	tRNA	methyltransferase	complex	GCD14	subunit
Glyco_trans_1_4	PF13692.1	gi|297526390|ref|YP_003668414.1|	-	6.5e-09	36.0	0.0	1.7e-08	34.6	0.0	1.7	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glycos_transf_1	PF00534.15	gi|297526390|ref|YP_003668414.1|	-	0.00057	19.3	0.0	0.0013	18.1	0.0	1.6	1	1	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|297526390|ref|YP_003668414.1|	-	0.00066	19.4	0.0	0.0019	17.9	0.0	1.8	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_4_4	PF13579.1	gi|297526390|ref|YP_003668414.1|	-	0.03	14.4	0.1	0.11	12.6	0.0	2.0	2	0	0	2	2	2	0	Glycosyl	transferase	4-like	domain
Macro	PF01661.16	gi|297526391|ref|YP_003668415.1|	-	4.4e-25	87.8	0.1	6.1e-25	87.4	0.0	1.2	1	0	0	1	1	1	1	Macro	domain
Macro_2	PF14519.1	gi|297526391|ref|YP_003668415.1|	-	5.6e-05	22.3	0.1	0.00058	19.0	0.1	2.1	1	1	0	1	1	1	1	Macro-like	domain
ThiS	PF02597.15	gi|297526392|ref|YP_003668416.1|	-	8.2e-11	42.1	0.0	9.4e-11	41.9	0.0	1.0	1	0	0	1	1	1	1	ThiS	family
ThiS-like	PF14453.1	gi|297526392|ref|YP_003668416.1|	-	0.037	13.8	2.3	0.1	12.4	1.6	1.8	1	1	0	1	1	1	0	ThiS-like	ubiquitin
S4	PF01479.20	gi|297526392|ref|YP_003668416.1|	-	0.044	13.2	0.3	0.071	12.5	0.2	1.4	1	0	0	1	1	1	0	S4	domain
MTHFR	PF02219.12	gi|297526393|ref|YP_003668417.1|	-	0.049	12.7	0.0	0.073	12.1	0.0	1.3	1	0	0	1	1	1	0	Methylenetetrahydrofolate	reductase
Meth_synt_2	PF01717.13	gi|297526394|ref|YP_003668418.1|	-	2.5e-08	33.2	0.0	9.1e-08	31.4	0.0	1.7	2	0	0	2	2	2	1	Cobalamin-independent	synthase,	Catalytic	domain
Meth_synt_1	PF08267.7	gi|297526394|ref|YP_003668418.1|	-	0.0085	15.3	0.0	0.026	13.7	0.0	1.7	1	1	0	1	1	1	1	Cobalamin-independent	synthase,	N-terminal	domain
URO-D	PF01208.12	gi|297526394|ref|YP_003668418.1|	-	0.029	13.2	0.0	0.041	12.8	0.0	1.2	1	0	0	1	1	1	0	Uroporphyrinogen	decarboxylase	(URO-D)
B12-binding	PF02310.14	gi|297526395|ref|YP_003668419.1|	-	1e-24	86.7	0.5	1.9e-24	85.8	0.4	1.4	1	0	0	1	1	1	1	B12	binding	domain
B12-binding_2	PF02607.12	gi|297526395|ref|YP_003668419.1|	-	1.1e-17	63.8	0.8	2.2e-17	62.8	0.2	1.8	2	0	0	2	2	2	1	B12	binding	domain
AF2331-like	PF14556.1	gi|297526395|ref|YP_003668419.1|	-	0.041	14.2	0.7	3.3	8.1	0.1	2.3	2	0	0	2	2	2	0	AF2331-like
Peripla_BP_4	PF13407.1	gi|297526395|ref|YP_003668419.1|	-	0.055	12.8	0.5	0.59	9.4	0.0	2.1	1	1	0	2	2	2	0	Periplasmic	binding	protein	domain
NIR_SIR	PF01077.17	gi|297526395|ref|YP_003668419.1|	-	0.74	9.1	2.9	0.95	8.8	2.0	1.3	1	1	0	1	1	1	0	Nitrite	and	sulphite	reductase	4Fe-4S	domain
DUF4445	PF14574.1	gi|297526396|ref|YP_003668420.1|	-	1.9e-91	306.3	0.0	2.6e-91	305.9	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4445)
Fer2	PF00111.22	gi|297526396|ref|YP_003668420.1|	-	7.7e-06	25.5	0.4	1.4e-05	24.7	0.3	1.4	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
MtrH	PF02007.13	gi|297526397|ref|YP_003668421.1|	-	2.2e-43	148.3	0.0	2.7e-43	148.0	0.0	1.0	1	0	0	1	1	1	1	Tetrahydromethanopterin	S-methyltransferase	MtrH	subunit
MatE	PF01554.13	gi|297526398|ref|YP_003668422.1|	-	8.3e-59	197.8	29.2	2.9e-34	118.0	5.9	2.4	2	0	0	2	2	2	2	MatE
Polysacc_synt_C	PF14667.1	gi|297526398|ref|YP_003668422.1|	-	4.3e-09	36.3	4.3	4.3e-09	36.3	3.0	4.6	2	2	2	5	5	5	2	Polysaccharide	biosynthesis	C-terminal	domain
DUF4516	PF14990.1	gi|297526398|ref|YP_003668422.1|	-	4.8	6.8	6.6	0.45	10.1	0.9	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4516)
Peptidase_S9	PF00326.16	gi|297526399|ref|YP_003668423.1|	-	1.4e-55	187.8	0.0	2e-55	187.3	0.0	1.2	1	0	0	1	1	1	1	Prolyl	oligopeptidase	family
Abhydrolase_5	PF12695.2	gi|297526399|ref|YP_003668423.1|	-	2.1e-12	47.0	0.0	3.3e-12	46.3	0.0	1.3	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Peptidase_S15	PF02129.13	gi|297526399|ref|YP_003668423.1|	-	2.3e-12	46.9	0.2	1.8e-08	34.1	0.2	2.3	1	1	0	2	2	2	2	X-Pro	dipeptidyl-peptidase	(S15	family)
AXE1	PF05448.7	gi|297526399|ref|YP_003668423.1|	-	4.5e-10	38.5	0.0	1.5e-08	33.5	0.0	2.2	1	1	0	1	1	1	1	Acetyl	xylan	esterase	(AXE1)
DPPIV_N	PF00930.16	gi|297526399|ref|YP_003668423.1|	-	8.3e-08	31.1	0.1	0.12	10.9	0.0	4.0	3	1	1	4	4	4	3	Dipeptidyl	peptidase	IV	(DPP	IV)	N-terminal	region
Abhydrolase_6	PF12697.2	gi|297526399|ref|YP_003668423.1|	-	5.2e-07	29.7	0.0	3.9e-05	23.6	0.0	2.4	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
PD40	PF07676.7	gi|297526399|ref|YP_003668423.1|	-	7.5e-07	28.6	5.0	0.77	9.4	0.0	4.8	4	0	0	4	4	4	2	WD40-like	Beta	Propeller	Repeat
WD40	PF00400.27	gi|297526399|ref|YP_003668423.1|	-	0.00017	21.3	0.0	0.94	9.4	0.0	4.0	3	1	0	3	3	3	1	WD	domain,	G-beta	repeat
DLH	PF01738.13	gi|297526399|ref|YP_003668423.1|	-	0.00031	20.0	0.0	0.00094	18.5	0.0	1.7	1	1	0	1	1	1	1	Dienelactone	hydrolase	family
Abhydrolase_3	PF07859.8	gi|297526399|ref|YP_003668423.1|	-	0.0027	17.2	0.0	0.31	10.5	0.0	2.4	1	1	0	1	1	1	1	alpha/beta	hydrolase	fold
Kelch_3	PF13415.1	gi|297526399|ref|YP_003668423.1|	-	0.015	15.4	1.3	1.6	9.0	0.1	4.0	4	0	0	4	4	4	0	Galactose	oxidase,	central	domain
PhoPQ_related	PF10142.4	gi|297526399|ref|YP_003668423.1|	-	0.14	10.6	0.0	0.2	10.0	0.0	1.3	1	0	0	1	1	1	0	PhoPQ-activated	pathogenicity-related	protein
AIM24	PF01987.12	gi|297526400|ref|YP_003668424.1|	-	9.6e-63	211.5	0.1	1.1e-62	211.3	0.0	1.0	1	0	0	1	1	1	1	Mitochondrial	biogenesis	AIM24
DUF1634	PF07843.6	gi|297526401|ref|YP_003668425.1|	-	0.00023	20.7	19.7	0.004	16.7	7.7	2.0	1	1	1	2	2	2	2	Protein	of	unknown	function	(DUF1634)
7TMR-DISM_7TM	PF07695.6	gi|297526401|ref|YP_003668425.1|	-	0.16	11.6	14.2	0.17	11.5	9.9	1.1	1	0	0	1	1	1	0	7TM	diverse	intracellular	signalling
TMEM238	PF15125.1	gi|297526401|ref|YP_003668425.1|	-	3.4	7.6	16.5	0.057	13.3	5.5	2.0	1	1	1	2	2	2	0	TMEM238	protein	family
YwiC	PF14256.1	gi|297526401|ref|YP_003668425.1|	-	4.7	7.3	8.0	8.9	6.4	5.5	1.5	1	1	0	1	1	1	0	YwiC-like	protein
SdpI	PF13630.1	gi|297526401|ref|YP_003668425.1|	-	6.4	6.5	20.2	9.7	5.9	7.2	2.1	1	1	1	2	2	2	0	SdpI/YhfL	protein	family
SPC12	PF06645.8	gi|297526401|ref|YP_003668425.1|	-	7.8	6.3	8.5	17	5.2	0.3	2.2	2	0	0	2	2	2	0	Microsomal	signal	peptidase	12	kDa	subunit	(SPC12)
TauE	PF01925.14	gi|297526402|ref|YP_003668426.1|	-	1e-51	175.7	32.9	1.2e-51	175.4	22.8	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
DUF3982	PF13138.1	gi|297526402|ref|YP_003668426.1|	-	0.047	13.5	0.1	0.12	12.2	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3982)
DUF2678	PF10856.3	gi|297526402|ref|YP_003668426.1|	-	1	9.1	4.1	5.8	6.6	0.0	2.9	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF2678)
DUF998	PF06197.8	gi|297526403|ref|YP_003668427.1|	-	4.7e-17	61.8	19.3	5.8e-17	61.5	13.4	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF998)
DUF962	PF06127.6	gi|297526403|ref|YP_003668427.1|	-	2	8.3	8.5	0.46	10.4	3.3	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF962)
UPF0066	PF01980.11	gi|297526404|ref|YP_003668428.1|	-	1.9e-34	118.1	0.0	2.8e-34	117.6	0.0	1.3	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0066
ABC_tran	PF00005.22	gi|297526405|ref|YP_003668429.1|	-	7.3e-28	97.5	0.0	1.1e-27	97.0	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297526405|ref|YP_003668429.1|	-	4.5e-16	59.6	0.1	2.4e-14	54.0	0.1	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.1	gi|297526405|ref|YP_003668429.1|	-	2.3e-05	24.8	0.0	3e-05	24.4	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|297526405|ref|YP_003668429.1|	-	2.6e-05	24.1	0.9	0.3	10.9	0.0	2.7	2	1	1	3	3	3	2	AAA	domain
AAA_15	PF13175.1	gi|297526405|ref|YP_003668429.1|	-	3.9e-05	22.9	0.0	0.19	10.7	0.0	2.2	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_29	PF13555.1	gi|297526405|ref|YP_003668429.1|	-	0.00062	19.2	0.1	0.0011	18.4	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
SMC_N	PF02463.14	gi|297526405|ref|YP_003668429.1|	-	0.00084	18.6	0.1	0.016	14.4	0.1	2.1	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
Arch_ATPase	PF01637.13	gi|297526405|ref|YP_003668429.1|	-	0.0015	18.3	0.3	0.0032	17.2	0.0	1.8	2	0	0	2	2	2	1	Archaeal	ATPase
AAA_13	PF13166.1	gi|297526405|ref|YP_003668429.1|	-	0.002	16.7	0.1	0.0028	16.2	0.0	1.1	1	0	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|297526405|ref|YP_003668429.1|	-	0.012	15.1	0.2	0.034	13.5	0.1	1.7	2	0	0	2	2	2	0	AAA-like	domain
AAA_19	PF13245.1	gi|297526405|ref|YP_003668429.1|	-	0.012	15.3	0.2	0.055	13.2	0.0	2.1	2	0	0	2	2	1	0	Part	of	AAA	domain
T2SE	PF00437.15	gi|297526405|ref|YP_003668429.1|	-	0.016	14.1	0.0	0.026	13.4	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
DUF258	PF03193.11	gi|297526405|ref|YP_003668429.1|	-	0.025	13.7	0.0	0.049	12.8	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA	PF00004.24	gi|297526405|ref|YP_003668429.1|	-	0.027	14.6	0.1	0.11	12.7	0.0	2.0	2	1	1	3	3	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
UPF0079	PF02367.12	gi|297526405|ref|YP_003668429.1|	-	0.027	14.1	0.0	0.057	13.0	0.0	1.5	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_16	PF13191.1	gi|297526405|ref|YP_003668429.1|	-	0.029	14.3	0.0	0.056	13.4	0.0	1.5	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_25	PF13481.1	gi|297526405|ref|YP_003668429.1|	-	0.032	13.6	0.0	0.063	12.6	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_17	PF13207.1	gi|297526405|ref|YP_003668429.1|	-	0.037	14.8	0.5	0.13	13.1	0.1	2.1	1	1	0	2	2	2	0	AAA	domain
NACHT	PF05729.7	gi|297526405|ref|YP_003668429.1|	-	0.037	13.6	0.2	0.065	12.8	0.1	1.4	1	0	0	1	1	1	0	NACHT	domain
AAA_5	PF07728.9	gi|297526405|ref|YP_003668429.1|	-	0.052	13.2	0.1	0.28	10.8	0.0	2.0	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
MobB	PF03205.9	gi|297526405|ref|YP_003668429.1|	-	0.059	13.0	0.1	0.1	12.2	0.0	1.4	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
DUF3584	PF12128.3	gi|297526405|ref|YP_003668429.1|	-	0.094	10.0	0.1	0.16	9.2	0.1	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
AAA_30	PF13604.1	gi|297526405|ref|YP_003668429.1|	-	0.1	12.1	0.0	0.23	11.0	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_22	PF13401.1	gi|297526405|ref|YP_003668429.1|	-	0.11	12.6	0.0	0.18	11.9	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
cobW	PF02492.14	gi|297526405|ref|YP_003668429.1|	-	0.13	11.7	0.3	0.21	11.0	0.2	1.3	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_33	PF13671.1	gi|297526405|ref|YP_003668429.1|	-	0.16	11.8	0.1	0.35	10.7	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
NMD3	PF04981.8	gi|297526407|ref|YP_003668431.1|	-	7.6e-45	152.8	0.0	8.6e-45	152.6	0.0	1.0	1	0	0	1	1	1	1	NMD3	family
DZR	PF12773.2	gi|297526407|ref|YP_003668431.1|	-	0.18	11.6	7.2	13	5.7	5.0	2.8	1	1	0	1	1	1	0	Double	zinc	ribbon
zf-FPG_IleRS	PF06827.9	gi|297526407|ref|YP_003668431.1|	-	2.7	7.7	6.8	2.5	7.8	0.2	3.2	3	0	0	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
zf-ribbon_3	PF13248.1	gi|297526407|ref|YP_003668431.1|	-	4	6.7	13.8	37	3.7	5.5	3.2	2	1	0	2	2	2	0	zinc-ribbon	domain
GFA	PF04828.9	gi|297526407|ref|YP_003668431.1|	-	4.9	7.1	6.0	7.7	6.5	0.0	2.8	2	1	1	3	3	3	0	Glutathione-dependent	formaldehyde-activating	enzyme
zinc_ribbon_2	PF13240.1	gi|297526407|ref|YP_003668431.1|	-	6.7	6.3	13.6	0.37	10.3	0.1	3.4	4	0	0	4	4	4	0	zinc-ribbon	domain
zf-CCHC_5	PF14787.1	gi|297526407|ref|YP_003668431.1|	-	8.3	5.9	8.7	5	6.7	1.2	2.4	2	0	0	2	2	2	0	GAG-polyprotein	viral	zinc-finger
HTH_AsnC-type	PF13404.1	gi|297526408|ref|YP_003668432.1|	-	4.2e-10	39.0	0.1	6.3e-10	38.4	0.1	1.3	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_24	PF13412.1	gi|297526408|ref|YP_003668432.1|	-	3.9e-09	35.7	0.3	8.4e-09	34.6	0.2	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|297526408|ref|YP_003668432.1|	-	7.3e-05	22.3	0.3	0.00015	21.3	0.2	1.4	1	0	0	1	1	1	1	HTH	domain
HTH_Mga	PF08280.6	gi|297526408|ref|YP_003668432.1|	-	0.00026	20.6	0.3	0.00072	19.2	0.0	1.8	2	0	0	2	2	2	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HTH_40	PF14493.1	gi|297526408|ref|YP_003668432.1|	-	0.0017	18.5	0.3	0.0084	16.3	0.0	1.9	2	0	0	2	2	2	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|297526408|ref|YP_003668432.1|	-	0.0028	17.3	0.0	0.0044	16.6	0.0	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_27	PF13463.1	gi|297526408|ref|YP_003668432.1|	-	0.0093	16.2	0.0	0.016	15.5	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_DeoR	PF08220.7	gi|297526408|ref|YP_003668432.1|	-	0.016	14.6	0.2	0.032	13.7	0.2	1.4	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
HTH_IclR	PF09339.5	gi|297526408|ref|YP_003668432.1|	-	0.028	14.0	0.0	0.049	13.2	0.0	1.4	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
DUF2089	PF09862.4	gi|297526408|ref|YP_003668432.1|	-	0.029	14.1	0.1	0.046	13.5	0.1	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2089)
MarR	PF01047.17	gi|297526408|ref|YP_003668432.1|	-	0.05	13.3	0.1	0.11	12.2	0.0	1.5	1	0	0	1	1	1	0	MarR	family
LexA_DNA_bind	PF01726.11	gi|297526408|ref|YP_003668432.1|	-	0.051	13.1	0.0	0.093	12.3	0.0	1.4	1	0	0	1	1	1	0	LexA	DNA	binding	domain
HTH_9	PF08221.6	gi|297526408|ref|YP_003668432.1|	-	0.058	13.2	0.1	0.4	10.5	0.0	2.2	2	0	0	2	2	2	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
MarR_2	PF12802.2	gi|297526408|ref|YP_003668432.1|	-	0.068	12.8	0.0	0.11	12.1	0.0	1.3	1	0	0	1	1	1	0	MarR	family
HTH_Tnp_ISL3	PF13542.1	gi|297526408|ref|YP_003668432.1|	-	0.084	12.0	0.1	0.13	11.4	0.1	1.2	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	transposase	family	ISL3
PCI_Csn8	PF10075.4	gi|297526408|ref|YP_003668432.1|	-	0.1	12.3	0.0	0.14	11.9	0.0	1.3	1	0	0	1	1	1	0	COP9	signalosome,	subunit	CSN8
DUF1841	PF08897.6	gi|297526409|ref|YP_003668433.1|	-	0.12	12.1	0.0	0.16	11.8	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1841)
ADK	PF00406.17	gi|297526410|ref|YP_003668434.1|	-	2.9e-51	173.2	0.0	3.5e-51	173.0	0.0	1.0	1	0	0	1	1	1	1	Adenylate	kinase
ADK_lid	PF05191.9	gi|297526410|ref|YP_003668434.1|	-	1.6e-16	59.6	3.2	3.1e-16	58.7	2.2	1.5	1	0	0	1	1	1	1	Adenylate	kinase,	active	site	lid
AAA_17	PF13207.1	gi|297526410|ref|YP_003668434.1|	-	1.4e-11	45.2	0.6	2.4e-11	44.5	0.3	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|297526410|ref|YP_003668434.1|	-	4.4e-07	30.2	0.5	8e-07	29.4	0.0	1.6	2	0	0	2	2	2	1	AAA	domain
AAA_33	PF13671.1	gi|297526410|ref|YP_003668434.1|	-	6.6e-05	22.8	0.0	0.00011	22.0	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
DUF1610	PF07754.6	gi|297526410|ref|YP_003668434.1|	-	0.0006	19.8	0.3	0.0017	18.4	0.2	1.8	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1610)
TF_Zn_Ribbon	PF08271.7	gi|297526410|ref|YP_003668434.1|	-	0.0007	18.8	0.6	0.0026	17.0	0.6	1.8	2	0	0	2	2	2	1	TFIIB	zinc-binding
AAA_22	PF13401.1	gi|297526410|ref|YP_003668434.1|	-	0.0041	17.2	0.0	0.0076	16.3	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
Thymidylate_kin	PF02223.12	gi|297526410|ref|YP_003668434.1|	-	0.037	13.3	0.0	0.1	11.9	0.0	1.7	2	0	0	2	2	2	0	Thymidylate	kinase
AAA_28	PF13521.1	gi|297526410|ref|YP_003668434.1|	-	0.069	13.1	0.0	0.16	11.9	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.7	gi|297526410|ref|YP_003668434.1|	-	0.12	11.5	0.0	0.17	10.9	0.0	1.5	1	1	0	1	1	1	0	Zeta	toxin
CoaE	PF01121.15	gi|297526410|ref|YP_003668434.1|	-	0.13	11.6	0.0	0.48	9.7	0.0	1.8	2	0	0	2	2	2	0	Dephospho-CoA	kinase
PAPS_reduct	PF01507.14	gi|297526411|ref|YP_003668435.1|	-	4.6e-34	117.7	0.0	8e-34	116.9	0.0	1.4	1	0	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
NAD_synthase	PF02540.12	gi|297526411|ref|YP_003668435.1|	-	0.0015	17.4	0.0	0.0027	16.6	0.0	1.3	1	0	0	1	1	1	1	NAD	synthase
Cas_Cas02710	PF09670.5	gi|297526411|ref|YP_003668435.1|	-	0.0026	16.4	0.0	0.004	15.8	0.0	1.2	1	0	0	1	1	1	1	CRISPR-associated	protein	(Cas_Cas02710)
ATP_bind_4	PF01902.12	gi|297526411|ref|YP_003668435.1|	-	0.0049	16.2	0.0	0.011	15.1	0.0	1.5	1	0	0	1	1	1	1	ATP-binding	region
QueC	PF06508.8	gi|297526411|ref|YP_003668435.1|	-	0.012	14.8	0.0	0.025	13.8	0.0	1.5	1	0	0	1	1	1	0	Queuosine	biosynthesis	protein	QueC
DUF1738	PF08401.6	gi|297526411|ref|YP_003668435.1|	-	0.055	13.1	0.0	0.12	12.0	0.0	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1738)
Flavodoxin_1	PF00258.20	gi|297526411|ref|YP_003668435.1|	-	0.062	13.3	0.0	0.15	12.0	0.0	1.7	2	0	0	2	2	2	0	Flavodoxin
ATP_bind_3	PF01171.15	gi|297526412|ref|YP_003668436.1|	-	4.2e-16	58.9	0.0	2e-15	56.7	0.0	2.1	1	1	0	1	1	1	1	PP-loop	family
ThiI	PF02568.9	gi|297526412|ref|YP_003668436.1|	-	8.2e-05	22.1	0.0	0.00012	21.6	0.0	1.2	1	0	0	1	1	1	1	Thiamine	biosynthesis	protein	(ThiI)
tRNA_Me_trans	PF03054.11	gi|297526412|ref|YP_003668436.1|	-	0.00034	19.2	0.0	0.00049	18.7	0.0	1.4	1	0	0	1	1	1	1	tRNA	methyl	transferase
NAD_synthase	PF02540.12	gi|297526412|ref|YP_003668436.1|	-	0.0015	17.5	0.2	0.0042	16.0	0.0	1.7	2	0	0	2	2	2	1	NAD	synthase
RecR	PF02132.10	gi|297526412|ref|YP_003668436.1|	-	0.0035	16.7	1.3	0.0035	16.7	0.9	3.9	4	0	0	4	4	4	1	RecR	protein
QueC	PF06508.8	gi|297526412|ref|YP_003668436.1|	-	0.0039	16.4	0.0	0.19	10.9	0.0	2.2	2	0	0	2	2	2	1	Queuosine	biosynthesis	protein	QueC
PAPS_reduct	PF01507.14	gi|297526412|ref|YP_003668436.1|	-	0.0039	17.0	0.0	0.014	15.2	0.0	1.9	1	1	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
Asn_synthase	PF00733.16	gi|297526412|ref|YP_003668436.1|	-	0.054	12.9	0.0	0.078	12.4	0.0	1.3	1	0	0	1	1	1	0	Asparagine	synthase
Ribosomal_S14	PF00253.16	gi|297526412|ref|YP_003668436.1|	-	0.34	10.3	6.6	3.7	6.9	0.8	2.7	2	0	0	2	2	2	0	Ribosomal	protein	S14p/S29e
CitG	PF01874.11	gi|297526413|ref|YP_003668437.1|	-	2.1e-61	207.5	0.0	2.6e-61	207.2	0.0	1.0	1	0	0	1	1	1	1	ATP:dephospho-CoA	triphosphoribosyl	transferase
TPR_19	PF14559.1	gi|297526414|ref|YP_003668438.1|	-	1.5e-06	28.4	6.7	0.058	13.7	0.1	4.5	5	0	0	5	5	5	3	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|297526414|ref|YP_003668438.1|	-	3.3e-05	24.0	5.9	0.32	11.5	0.2	4.8	4	0	0	4	4	4	2	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|297526414|ref|YP_003668438.1|	-	4.7e-05	23.4	3.5	0.025	14.6	0.1	4.0	3	0	0	3	3	3	1	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_12	PF13424.1	gi|297526414|ref|YP_003668438.1|	-	0.00024	20.9	6.3	0.0031	17.3	0.4	5.9	3	1	5	8	8	8	2	Tetratricopeptide	repeat
TPR_16	PF13432.1	gi|297526414|ref|YP_003668438.1|	-	0.0022	18.6	10.3	0.022	15.4	0.2	4.3	5	0	0	5	5	4	1	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|297526414|ref|YP_003668438.1|	-	0.0057	17.1	1.7	8.8	7.2	0.2	4.5	5	0	0	5	5	4	1	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|297526414|ref|YP_003668438.1|	-	0.01	15.5	20.9	0.089	12.6	0.2	5.5	5	0	0	5	5	4	0	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|297526414|ref|YP_003668438.1|	-	0.015	14.9	22.5	0.064	12.9	0.3	6.4	4	2	2	6	6	6	0	TPR	repeat
TPR_20	PF14561.1	gi|297526414|ref|YP_003668438.1|	-	0.024	14.7	0.7	0.13	12.3	0.0	2.6	2	0	0	2	2	2	0	Tetratricopeptide	repeat
Pro_3_hydrox_C	PF05373.6	gi|297526414|ref|YP_003668438.1|	-	0.032	14.2	0.6	0.15	12.0	0.1	2.4	2	0	0	2	2	2	0	L-proline	3-hydroxylase,	C-terminal
TPR_2	PF07719.12	gi|297526414|ref|YP_003668438.1|	-	0.049	13.5	20.3	0.27	11.2	0.6	6.1	6	0	0	6	6	6	0	Tetratricopeptide	repeat
TPR_10	PF13374.1	gi|297526414|ref|YP_003668438.1|	-	0.063	13.2	1.7	1.9	8.5	0.1	3.6	4	0	0	4	4	4	0	Tetratricopeptide	repeat
TPR_7	PF13176.1	gi|297526414|ref|YP_003668438.1|	-	1.6	8.7	8.5	0.96	9.4	0.1	4.5	5	0	0	5	5	5	0	Tetratricopeptide	repeat
Peptidase_M29	PF02073.10	gi|297526415|ref|YP_003668439.1|	-	6.7e-113	377.4	0.0	7.5e-113	377.2	0.0	1.0	1	0	0	1	1	1	1	Thermophilic	metalloprotease	(M29)
PsbP	PF01789.11	gi|297526415|ref|YP_003668439.1|	-	0.0088	15.5	0.1	0.016	14.6	0.0	1.3	1	0	0	1	1	1	1	PsbP
Sep15_SelM	PF08806.6	gi|297526416|ref|YP_003668440.1|	-	0.023	14.4	0.0	0.037	13.7	0.0	1.3	1	0	0	1	1	1	0	Sep15/SelM	redox	domain
Herpes_U47	PF05467.6	gi|297526416|ref|YP_003668440.1|	-	0.079	10.7	1.4	0.1	10.4	1.0	1.1	1	0	0	1	1	1	0	Herpesvirus	glycoprotein	U47
CbiQ	PF02361.11	gi|297526416|ref|YP_003668440.1|	-	0.53	9.8	19.8	86	2.5	13.7	2.9	1	1	0	1	1	1	0	Cobalt	transport	protein
ABC_tran	PF00005.22	gi|297526417|ref|YP_003668441.1|	-	1.4e-21	77.2	0.0	2.3e-21	76.5	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297526417|ref|YP_003668441.1|	-	3.5e-14	53.4	0.3	5.6e-06	26.5	0.0	2.1	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|297526417|ref|YP_003668441.1|	-	4.2e-07	29.4	0.0	5e-05	22.6	0.0	2.2	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|297526417|ref|YP_003668441.1|	-	8.4e-05	22.9	0.0	0.00012	22.5	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|297526417|ref|YP_003668441.1|	-	0.0001	21.4	0.0	0.0029	16.7	0.0	2.1	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_14	PF13173.1	gi|297526417|ref|YP_003668441.1|	-	0.00018	21.3	0.0	0.00035	20.4	0.0	1.5	2	0	0	2	2	1	1	AAA	domain
AAA_29	PF13555.1	gi|297526417|ref|YP_003668441.1|	-	0.00068	19.1	0.1	0.002	17.5	0.0	1.9	2	0	0	2	2	1	1	P-loop	containing	region	of	AAA	domain
NACHT	PF05729.7	gi|297526417|ref|YP_003668441.1|	-	0.0019	17.8	0.2	0.0094	15.6	0.1	2.0	3	0	0	3	3	2	1	NACHT	domain
AAA_18	PF13238.1	gi|297526417|ref|YP_003668441.1|	-	0.0051	17.1	0.5	0.49	10.7	0.1	2.2	1	1	1	2	2	2	1	AAA	domain
AAA_25	PF13481.1	gi|297526417|ref|YP_003668441.1|	-	0.0057	16.0	0.0	0.011	15.1	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|297526417|ref|YP_003668441.1|	-	0.0067	16.1	0.0	0.015	15.0	0.0	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
T2SE	PF00437.15	gi|297526417|ref|YP_003668441.1|	-	0.0091	14.9	0.0	0.013	14.4	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
cobW	PF02492.14	gi|297526417|ref|YP_003668441.1|	-	0.011	15.1	0.0	0.025	14.0	0.0	1.5	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_22	PF13401.1	gi|297526417|ref|YP_003668441.1|	-	0.011	15.8	0.0	0.21	11.7	0.2	2.4	1	1	1	2	2	2	0	AAA	domain
Arch_ATPase	PF01637.13	gi|297526417|ref|YP_003668441.1|	-	0.02	14.5	0.1	0.029	14.0	0.1	1.3	1	0	0	1	1	1	0	Archaeal	ATPase
AAA_33	PF13671.1	gi|297526417|ref|YP_003668441.1|	-	0.025	14.4	0.0	0.099	12.5	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
AAA_28	PF13521.1	gi|297526417|ref|YP_003668441.1|	-	0.043	13.7	0.0	0.12	12.3	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
Mg_chelatase	PF01078.16	gi|297526417|ref|YP_003668441.1|	-	0.045	12.9	0.0	0.074	12.2	0.0	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_10	PF12846.2	gi|297526417|ref|YP_003668441.1|	-	0.051	13.0	0.5	0.41	10.0	0.2	2.2	2	1	0	2	2	2	0	AAA-like	domain
G-alpha	PF00503.15	gi|297526417|ref|YP_003668441.1|	-	0.052	12.2	0.0	0.067	11.8	0.0	1.1	1	0	0	1	1	1	0	G-protein	alpha	subunit
AAA_16	PF13191.1	gi|297526417|ref|YP_003668441.1|	-	0.053	13.5	0.0	0.065	13.2	0.0	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
DUF258	PF03193.11	gi|297526417|ref|YP_003668441.1|	-	0.058	12.5	0.0	0.095	11.8	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_5	PF07728.9	gi|297526417|ref|YP_003668441.1|	-	0.06	13.0	0.0	0.14	11.8	0.0	1.6	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
ABC_ATPase	PF09818.4	gi|297526417|ref|YP_003668441.1|	-	0.083	11.4	0.2	0.12	10.9	0.1	1.2	1	0	0	1	1	1	0	Predicted	ATPase	of	the	ABC	class
AAA_30	PF13604.1	gi|297526417|ref|YP_003668441.1|	-	0.084	12.4	0.0	0.23	11.0	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
SbcCD_C	PF13558.1	gi|297526417|ref|YP_003668441.1|	-	0.09	12.7	0.1	0.41	10.5	0.1	1.9	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA	PF00004.24	gi|297526417|ref|YP_003668441.1|	-	0.11	12.6	0.2	0.33	11.1	0.1	1.8	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
SRP54	PF00448.17	gi|297526417|ref|YP_003668441.1|	-	0.11	11.8	0.0	0.15	11.4	0.0	1.2	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
QueT	PF06177.6	gi|297526418|ref|YP_003668442.1|	-	6.2e-40	136.6	15.3	7e-40	136.4	10.6	1.0	1	0	0	1	1	1	1	QueT	transporter
Gal4_dimer	PF03902.8	gi|297526420|ref|YP_003668444.1|	-	0.023	14.6	1.9	0.069	13.0	1.3	1.8	1	0	0	1	1	1	0	Gal4-like	dimerisation	domain
EAP30	PF04157.11	gi|297526420|ref|YP_003668444.1|	-	0.07	12.2	0.4	0.16	11.1	0.1	1.6	1	1	1	2	2	2	0	EAP30/Vps36	family
DUF2360	PF10152.4	gi|297526420|ref|YP_003668444.1|	-	0.14	12.4	0.5	0.14	12.4	0.3	1.2	1	0	0	1	1	1	0	Predicted	coiled-coil	domain-containing	protein	(DUF2360)
Matrilin_ccoil	PF10393.4	gi|297526420|ref|YP_003668444.1|	-	3	7.2	8.6	2.5	7.5	2.7	2.8	4	0	0	4	4	4	0	Trimeric	coiled-coil	oligomerisation	domain	of	matrilin
CENP-F_leu_zip	PF10473.4	gi|297526421|ref|YP_003668445.1|	-	0.014	15.2	2.4	0.014	15.2	1.7	1.6	2	0	0	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
DUF1451	PF07295.6	gi|297526421|ref|YP_003668445.1|	-	0.029	14.1	0.7	0.04	13.6	0.5	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1451)
FlaC_arch	PF05377.6	gi|297526421|ref|YP_003668445.1|	-	0.038	13.8	1.2	0.11	12.4	0.8	1.7	1	0	0	1	1	1	0	Flagella	accessory	protein	C	(FlaC)
PqqD	PF05402.7	gi|297526421|ref|YP_003668445.1|	-	0.073	13.0	0.1	0.19	11.7	0.0	1.7	1	1	1	2	2	2	0	Coenzyme	PQQ	synthesis	protein	D	(PqqD)
Trypan_glycop	PF00913.14	gi|297526421|ref|YP_003668445.1|	-	0.097	11.5	2.1	0.12	11.2	1.5	1.1	1	0	0	1	1	1	0	Trypanosome	variant	surface	glycoprotein	(A-type)
YtxH	PF12732.2	gi|297526421|ref|YP_003668445.1|	-	0.099	13.0	0.4	1.4	9.3	0.2	2.2	1	1	0	1	1	1	0	YtxH-like	protein
FliS	PF02561.9	gi|297526421|ref|YP_003668445.1|	-	0.1	12.4	0.2	0.16	11.8	0.2	1.4	1	1	0	1	1	1	0	Flagellar	protein	FliS
DUF4611	PF15387.1	gi|297526421|ref|YP_003668445.1|	-	0.5	10.5	4.7	0.81	9.8	0.1	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4611)
SIS	PF01380.17	gi|297526422|ref|YP_003668446.1|	-	8.6e-18	64.2	0.0	1.8e-17	63.1	0.0	1.6	1	0	0	1	1	1	1	SIS	domain
SIS_2	PF13580.1	gi|297526422|ref|YP_003668446.1|	-	2.6e-13	49.8	2.2	3.9e-09	36.3	0.3	2.4	1	1	1	2	2	2	2	SIS	domain
PRMT5	PF05185.11	gi|297526422|ref|YP_003668446.1|	-	0.046	12.6	2.3	0.56	9.0	0.0	2.1	1	1	1	2	2	2	0	PRMT5	arginine-N-methyltransferase
Usp	PF00582.21	gi|297526422|ref|YP_003668446.1|	-	0.049	13.8	0.0	0.81	9.8	0.0	2.2	2	0	0	2	2	2	0	Universal	stress	protein	family
2-Hacid_dh_C	PF02826.14	gi|297526422|ref|YP_003668446.1|	-	0.062	12.4	1.3	1.9	7.6	0.2	2.2	1	1	1	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Anti-adapt_IraP	PF10796.4	gi|297526422|ref|YP_003668446.1|	-	0.066	13.6	2.7	1.3	9.4	0.1	2.4	2	0	0	2	2	2	0	Sigma-S	stabilisation	anti-adaptor	protein
GnsAB	PF08178.6	gi|297526422|ref|YP_003668446.1|	-	0.39	10.4	4.2	13	5.5	0.1	2.5	2	0	0	2	2	2	0	GnsA/GnsB	family
Radical_SAM	PF04055.16	gi|297526423|ref|YP_003668447.1|	-	2.2e-13	50.6	0.0	1.9e-12	47.6	0.0	2.0	1	1	1	2	2	2	1	Radical	SAM	superfamily
DUF1848	PF08902.6	gi|297526423|ref|YP_003668447.1|	-	1.8e-07	30.9	2.3	0.0096	15.4	1.5	2.3	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF1848)
zf-ZPR1	PF03367.8	gi|297526424|ref|YP_003668448.1|	-	1.8e-32	111.7	0.0	2.2e-32	111.4	0.0	1.1	1	0	0	1	1	1	1	ZPR1	zinc-finger	domain
UPF0547	PF10571.4	gi|297526424|ref|YP_003668448.1|	-	0.0027	17.3	2.6	0.016	14.9	1.8	2.1	1	1	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
TF_Zn_Ribbon	PF08271.7	gi|297526424|ref|YP_003668448.1|	-	0.0077	15.5	1.0	1	8.7	0.1	3.3	3	0	0	3	3	3	1	TFIIB	zinc-binding
DiS_P_DiS	PF06750.8	gi|297526424|ref|YP_003668448.1|	-	0.028	14.1	0.2	0.059	13.1	0.1	1.4	1	0	0	1	1	1	0	Bacterial	Peptidase	A24	N-terminal	domain
Lar_restr_allev	PF14354.1	gi|297526424|ref|YP_003668448.1|	-	0.034	14.4	0.1	0.068	13.4	0.0	1.5	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
zinc_ribbon_2	PF13240.1	gi|297526424|ref|YP_003668448.1|	-	0.044	13.2	1.2	0.16	11.5	0.2	2.3	2	1	1	3	3	3	0	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|297526424|ref|YP_003668448.1|	-	0.12	11.6	3.6	1.4	8.2	2.5	2.3	1	1	0	1	1	1	0	zinc-ribbon	domain
zf-TFIIB	PF13453.1	gi|297526424|ref|YP_003668448.1|	-	0.12	11.5	3.7	0.062	12.4	0.9	1.9	2	1	0	2	2	2	0	Transcription	factor	zinc-finger
Rad50_zn_hook	PF04423.9	gi|297526424|ref|YP_003668448.1|	-	0.13	11.7	0.1	0.13	11.7	0.1	2.4	3	0	0	3	3	2	0	Rad50	zinc	hook	motif
HypA	PF01155.14	gi|297526424|ref|YP_003668448.1|	-	0.13	11.9	0.2	0.38	10.4	0.2	1.7	1	1	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zinc_ribbon_5	PF13719.1	gi|297526424|ref|YP_003668448.1|	-	0.17	11.4	1.8	9.4	5.9	0.0	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF2116	PF09889.4	gi|297526424|ref|YP_003668448.1|	-	0.2	11.4	0.9	10	6.0	0.1	2.6	2	0	0	2	2	2	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
OrfB_Zn_ribbon	PF07282.6	gi|297526424|ref|YP_003668448.1|	-	0.26	10.9	2.6	5	6.8	0.1	2.3	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
Zn-ribbon_8	PF09723.5	gi|297526424|ref|YP_003668448.1|	-	0.34	10.9	2.5	3.5	7.6	0.0	2.9	3	0	0	3	3	3	0	Zinc	ribbon	domain
zinc_ribbon_4	PF13717.1	gi|297526424|ref|YP_003668448.1|	-	0.38	10.4	2.3	19	5.0	0.0	2.6	2	0	0	2	2	2	0	zinc-ribbon	domain
Adenine_deam_C	PF13382.1	gi|297526425|ref|YP_003668449.1|	-	6.3e-61	204.4	0.1	1e-60	203.8	0.1	1.3	1	0	0	1	1	1	1	Adenine	deaminase	C-terminal	domain
Amidohydro_1	PF01979.15	gi|297526425|ref|YP_003668449.1|	-	7.9e-23	81.6	1.0	7.4e-22	78.4	0.7	2.1	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|297526425|ref|YP_003668449.1|	-	1.1e-11	44.3	0.1	3.9e-11	42.5	0.1	2.0	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_4	PF13147.1	gi|297526425|ref|YP_003668449.1|	-	2.7e-10	40.7	0.2	0.00015	21.8	0.1	2.6	2	1	0	2	2	2	2	Amidohydrolase
Amidohydro_3	PF07969.6	gi|297526425|ref|YP_003668449.1|	-	2.6e-05	23.6	0.7	0.19	10.8	0.0	2.4	2	0	0	2	2	2	2	Amidohydrolase	family
Amidohydro_1	PF01979.15	gi|297526426|ref|YP_003668450.1|	-	4.4e-54	184.3	0.1	5.6e-54	184.0	0.1	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|297526426|ref|YP_003668450.1|	-	3.6e-14	53.4	0.3	6.6e-09	36.2	0.0	2.3	2	0	0	2	2	2	2	Amidohydrolase
Amidohydro_5	PF13594.1	gi|297526426|ref|YP_003668450.1|	-	3.8e-12	45.8	0.0	1.2e-11	44.2	0.0	1.9	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|297526426|ref|YP_003668450.1|	-	2.3e-11	43.5	0.6	8.5e-09	35.1	0.1	2.2	2	0	0	2	2	2	2	Amidohydrolase	family
Aminotran_5	PF00266.14	gi|297526428|ref|YP_003668452.1|	-	5.7e-139	462.9	0.0	6.6e-139	462.7	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-V
DegT_DnrJ_EryC1	PF01041.12	gi|297526428|ref|YP_003668452.1|	-	3.7e-11	42.6	0.0	5.6e-11	42.0	0.0	1.3	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Cys_Met_Meta_PP	PF01053.15	gi|297526428|ref|YP_003668452.1|	-	7.3e-09	34.3	0.0	3.5e-08	32.1	0.0	1.9	2	0	0	2	2	2	1	Cys/Met	metabolism	PLP-dependent	enzyme
Beta_elim_lyase	PF01212.16	gi|297526428|ref|YP_003668452.1|	-	9.6e-07	28.2	0.0	1.2e-06	27.8	0.0	1.2	1	0	0	1	1	1	1	Beta-eliminating	lyase
SelA	PF03841.8	gi|297526428|ref|YP_003668452.1|	-	0.0082	14.9	0.0	0.017	13.8	0.0	1.5	1	0	0	1	1	1	1	L-seryl-tRNA	selenium	transferase
PalH	PF08733.5	gi|297526428|ref|YP_003668452.1|	-	0.014	14.2	0.0	0.029	13.2	0.0	1.4	1	0	0	1	1	1	0	PalH/RIM21
EF-hand_7	PF13499.1	gi|297526428|ref|YP_003668452.1|	-	0.042	13.9	0.1	1.6	8.9	0.0	2.6	2	0	0	2	2	2	0	EF-hand	domain	pair
AsnC_trans_reg	PF01037.16	gi|297526428|ref|YP_003668452.1|	-	0.043	13.5	0.0	0.17	11.6	0.0	2.0	1	0	0	1	1	1	0	AsnC	family
DUF296	PF03479.10	gi|297526429|ref|YP_003668453.1|	-	2.2e-28	98.2	0.1	2.5e-28	98.1	0.1	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF296)
Polysacc_deac_1	PF01522.16	gi|297526430|ref|YP_003668454.1|	-	4.2e-22	78.0	0.0	8.8e-22	77.0	0.0	1.5	2	0	0	2	2	2	1	Polysaccharide	deacetylase
DUF2334	PF10096.4	gi|297526430|ref|YP_003668454.1|	-	0.0017	17.8	0.1	0.0036	16.7	0.1	1.6	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2334)
Nol1_Nop2_Fmu	PF01189.12	gi|297526431|ref|YP_003668455.1|	-	1.4e-59	201.8	0.0	1.9e-59	201.3	0.0	1.2	1	0	0	1	1	1	1	NOL1/NOP2/sun	family
Methyltransf_31	PF13847.1	gi|297526431|ref|YP_003668455.1|	-	3.1e-08	33.3	0.0	4.8e-08	32.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
FtsJ	PF01728.14	gi|297526431|ref|YP_003668455.1|	-	9.7e-07	28.9	0.0	1.8e-06	28.1	0.0	1.4	1	0	0	1	1	1	1	FtsJ-like	methyltransferase
Methyltransf_26	PF13659.1	gi|297526431|ref|YP_003668455.1|	-	3.3e-06	27.1	0.0	6.5e-06	26.1	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|297526431|ref|YP_003668455.1|	-	0.006	17.1	0.0	0.012	16.1	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|297526431|ref|YP_003668455.1|	-	0.013	14.9	0.0	0.02	14.2	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	small	domain
Fibrillarin	PF01269.12	gi|297526431|ref|YP_003668455.1|	-	0.019	13.8	0.0	0.033	13.0	0.0	1.3	1	0	0	1	1	1	0	Fibrillarin
NusB	PF01029.13	gi|297526431|ref|YP_003668455.1|	-	0.1	12.6	0.0	0.26	11.2	0.0	1.7	1	0	0	1	1	1	0	NusB	family
EamA	PF00892.15	gi|297526432|ref|YP_003668456.1|	-	1.6e-19	70.2	20.1	1.8e-19	70.0	14.0	1.0	1	0	0	1	1	1	1	EamA-like	transporter	family
EmrE	PF13536.1	gi|297526432|ref|YP_003668456.1|	-	0.00018	21.6	19.9	0.0019	18.3	13.8	2.1	1	1	0	1	1	1	1	Multidrug	resistance	efflux	transporter
Mg_trans_NIPA	PF05653.9	gi|297526432|ref|YP_003668456.1|	-	0.0022	17.0	3.7	0.0022	17.0	2.6	1.4	1	1	0	1	1	1	1	Magnesium	transporter	NIPA
TPT	PF03151.11	gi|297526432|ref|YP_003668456.1|	-	0.0096	15.5	1.3	0.0096	15.5	0.9	2.3	1	1	0	2	2	2	1	Triose-phosphate	Transporter	family
Mem_trans	PF03547.13	gi|297526433|ref|YP_003668457.1|	-	1e-09	37.1	31.4	3.1e-05	22.4	8.4	2.1	1	1	1	2	2	2	2	Membrane	transport	protein
PA14	PF07691.7	gi|297526434|ref|YP_003668458.1|	-	1.2e-16	60.7	0.1	1.5e-16	60.3	0.0	1.1	1	0	0	1	1	1	1	PA14	domain
RNA12	PF10443.4	gi|297526436|ref|YP_003668460.1|	-	7.9e-05	21.3	0.1	0.00076	18.0	0.0	1.9	2	0	0	2	2	2	1	RNA12	protein
HD	PF01966.17	gi|297526436|ref|YP_003668460.1|	-	0.00032	20.7	0.1	0.00057	19.8	0.1	1.4	1	0	0	1	1	1	1	HD	domain
DUF2419	PF10343.4	gi|297526438|ref|YP_003668462.1|	-	0.0023	17.2	0.0	0.0039	16.4	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2419)
DUF1886	PF09171.5	gi|297526438|ref|YP_003668462.1|	-	0.11	11.4	0.0	0.2	10.6	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1886)
Methyltransf_26	PF13659.1	gi|297526440|ref|YP_003668464.1|	-	1.8e-12	47.3	0.0	2.8e-12	46.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|297526440|ref|YP_003668464.1|	-	3.3e-05	24.4	0.0	6.6e-05	23.4	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|297526440|ref|YP_003668464.1|	-	4e-05	24.0	0.0	0.00044	20.6	0.0	2.5	1	1	1	2	2	2	1	Methyltransferase	domain
MTS	PF05175.9	gi|297526440|ref|YP_003668464.1|	-	5e-05	22.7	0.0	7.6e-05	22.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.1	gi|297526440|ref|YP_003668464.1|	-	0.00012	21.7	0.0	0.0002	21.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|297526440|ref|YP_003668464.1|	-	0.00013	21.2	0.0	0.00032	19.9	0.0	1.6	2	0	0	2	2	2	1	ubiE/COQ5	methyltransferase	family
Cons_hypoth95	PF03602.10	gi|297526440|ref|YP_003668464.1|	-	0.0006	19.2	0.0	0.00084	18.7	0.0	1.2	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltransf_15	PF09445.5	gi|297526440|ref|YP_003668464.1|	-	0.0017	17.9	0.0	0.0029	17.1	0.0	1.3	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
UPF0020	PF01170.13	gi|297526440|ref|YP_003668464.1|	-	0.0024	17.5	0.0	0.0036	16.8	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Met_10	PF02475.11	gi|297526440|ref|YP_003668464.1|	-	0.0072	15.9	0.0	0.011	15.2	0.0	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
Spermine_synth	PF01564.12	gi|297526440|ref|YP_003668464.1|	-	0.0075	15.2	0.0	0.011	14.7	0.0	1.2	1	0	0	1	1	1	1	Spermine/spermidine	synthase
PrmA	PF06325.8	gi|297526440|ref|YP_003668464.1|	-	0.01	14.9	0.0	0.016	14.3	0.0	1.3	1	0	0	1	1	1	0	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_24	PF13578.1	gi|297526440|ref|YP_003668464.1|	-	0.022	15.5	0.0	0.067	14.0	0.0	1.8	1	1	0	1	1	1	0	Methyltransferase	domain
N6_N4_Mtase	PF01555.13	gi|297526440|ref|YP_003668464.1|	-	0.077	12.4	0.0	6.1	6.2	0.0	2.6	3	0	0	3	3	3	0	DNA	methylase
Methyltransf_30	PF05430.6	gi|297526440|ref|YP_003668464.1|	-	0.11	12.1	0.0	0.19	11.3	0.0	1.3	1	0	0	1	1	1	0	S-adenosyl-L-methionine-dependent	methyltransferase
RHH_1	PF01402.16	gi|297526441|ref|YP_003668465.1|	-	3.9e-08	32.8	0.1	1.2e-07	31.2	0.0	1.8	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
RHH_3	PF12651.2	gi|297526441|ref|YP_003668465.1|	-	5e-06	26.1	0.0	8.7e-06	25.3	0.0	1.4	1	0	0	1	1	1	1	Ribbon-helix-helix	domain
NikR_C	PF08753.6	gi|297526441|ref|YP_003668465.1|	-	0.00018	21.3	0.1	0.00046	20.0	0.1	1.8	1	1	1	2	2	2	1	NikR	C	terminal	nickel	binding	domain
ABC-3	PF00950.12	gi|297526442|ref|YP_003668466.1|	-	2.9e-21	75.9	34.6	2.9e-21	75.9	24.0	1.3	1	1	0	1	1	1	1	ABC	3	transport	family
SVM_signal	PF12113.3	gi|297526442|ref|YP_003668466.1|	-	2.7	7.8	18.5	1.4	8.8	0.4	4.1	4	0	0	4	4	4	0	SVM	protein	signal	sequence
TroA	PF01297.12	gi|297526443|ref|YP_003668467.1|	-	3.2e-31	108.5	1.5	4.2e-31	108.1	1.0	1.1	1	0	0	1	1	1	1	Periplasmic	solute	binding	protein	family
PucR	PF07905.6	gi|297526443|ref|YP_003668467.1|	-	0.091	12.3	0.0	0.18	11.3	0.0	1.6	1	0	0	1	1	1	0	Purine	catabolism	regulatory	protein-like	family
ABC_tran	PF00005.22	gi|297526444|ref|YP_003668468.1|	-	2e-28	99.3	0.0	2.8e-28	98.9	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297526444|ref|YP_003668468.1|	-	2.5e-13	50.6	0.0	3.2e-07	30.5	0.0	2.1	2	0	0	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|297526444|ref|YP_003668468.1|	-	2.5e-08	33.4	0.0	0.00013	21.1	0.0	2.1	2	0	0	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|297526444|ref|YP_003668468.1|	-	4.4e-05	22.8	0.0	0.18	11.0	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|297526444|ref|YP_003668468.1|	-	0.00023	21.5	0.2	0.00036	20.9	0.2	1.2	1	0	0	1	1	1	1	AAA	domain
NACHT	PF05729.7	gi|297526444|ref|YP_003668468.1|	-	0.0032	17.1	1.3	0.068	12.8	0.2	2.3	2	0	0	2	2	2	1	NACHT	domain
AAA_16	PF13191.1	gi|297526444|ref|YP_003668468.1|	-	0.0039	17.2	0.0	0.0073	16.3	0.0	1.4	1	0	0	1	1	1	1	AAA	ATPase	domain
T2SE	PF00437.15	gi|297526444|ref|YP_003668468.1|	-	0.0083	15.0	0.1	0.012	14.4	0.1	1.2	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
Zeta_toxin	PF06414.7	gi|297526444|ref|YP_003668468.1|	-	0.015	14.4	0.0	0.023	13.7	0.0	1.2	1	0	0	1	1	1	0	Zeta	toxin
AAA_14	PF13173.1	gi|297526444|ref|YP_003668468.1|	-	0.017	14.9	0.0	0.59	10.0	0.0	2.5	3	0	0	3	3	2	0	AAA	domain
AAA_10	PF12846.2	gi|297526444|ref|YP_003668468.1|	-	0.019	14.4	0.0	0.021	14.2	0.0	1.2	1	0	0	1	1	1	0	AAA-like	domain
AAA_29	PF13555.1	gi|297526444|ref|YP_003668468.1|	-	0.02	14.3	0.0	0.036	13.5	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
MobB	PF03205.9	gi|297526444|ref|YP_003668468.1|	-	0.023	14.3	0.0	0.048	13.3	0.0	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
cobW	PF02492.14	gi|297526444|ref|YP_003668468.1|	-	0.028	13.8	0.2	0.051	13.0	0.1	1.3	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
SbcCD_C	PF13558.1	gi|297526444|ref|YP_003668468.1|	-	0.032	14.1	0.0	0.44	10.5	0.0	2.2	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA	PF00004.24	gi|297526444|ref|YP_003668468.1|	-	0.032	14.4	0.0	0.15	12.2	0.0	2.2	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
NB-ARC	PF00931.17	gi|297526444|ref|YP_003668468.1|	-	0.034	13.0	0.1	0.073	11.9	0.1	1.5	1	0	0	1	1	1	0	NB-ARC	domain
AAA_22	PF13401.1	gi|297526444|ref|YP_003668468.1|	-	0.037	14.1	0.1	0.085	13.0	0.1	1.6	1	0	0	1	1	1	0	AAA	domain
Arch_ATPase	PF01637.13	gi|297526444|ref|YP_003668468.1|	-	0.049	13.3	0.1	0.13	11.9	0.1	1.6	1	0	0	1	1	1	0	Archaeal	ATPase
DUF3584	PF12128.3	gi|297526444|ref|YP_003668468.1|	-	0.066	10.5	0.4	0.084	10.2	0.2	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3584)
AAA_19	PF13245.1	gi|297526444|ref|YP_003668468.1|	-	0.071	12.8	0.1	0.15	11.8	0.1	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
DUF711	PF05167.7	gi|297526445|ref|YP_003668469.1|	-	2.2e-47	161.6	0.0	1.3e-41	142.7	0.0	2.0	2	0	0	2	2	2	2	Uncharacterised	ACR	(DUF711)
CTD_bind	PF04818.8	gi|297526445|ref|YP_003668469.1|	-	0.14	12.4	0.3	0.73	10.1	0.0	2.2	2	0	0	2	2	2	0	RNA	polymerase	II-binding	domain.
SMC_N	PF02463.14	gi|297526447|ref|YP_003668471.1|	-	0.15	11.2	0.0	0.25	10.5	0.0	1.2	1	0	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
P53_tetramer	PF07710.6	gi|297526448|ref|YP_003668472.1|	-	0.12	11.4	0.3	0.42	9.7	0.2	1.9	1	1	0	1	1	1	0	P53	tetramerisation	motif
HTH_45	PF14947.1	gi|297526450|ref|YP_003668474.1|	-	9.1e-08	31.8	2.8	1.7e-07	30.9	2.0	1.5	1	1	0	1	1	1	1	Winged	helix-turn-helix
HTH_12	PF08461.5	gi|297526450|ref|YP_003668474.1|	-	7.8e-07	28.7	0.5	1.7e-06	27.6	0.1	1.7	2	1	0	2	2	2	1	Ribonuclease	R	winged-helix	domain
LexA_DNA_bind	PF01726.11	gi|297526450|ref|YP_003668474.1|	-	0.0014	18.1	0.0	0.0028	17.1	0.0	1.5	1	1	0	1	1	1	1	LexA	DNA	binding	domain
Penicillinase_R	PF03965.11	gi|297526450|ref|YP_003668474.1|	-	0.0022	18.0	0.0	0.004	17.2	0.0	1.6	1	1	0	1	1	1	1	Penicillinase	repressor
DUF3116	PF11313.3	gi|297526450|ref|YP_003668474.1|	-	0.0035	16.9	1.3	0.01	15.4	0.9	1.7	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF3116)
HxlR	PF01638.12	gi|297526450|ref|YP_003668474.1|	-	0.0069	16.0	0.1	0.03	13.9	0.0	1.9	1	1	0	2	2	2	1	HxlR-like	helix-turn-helix
Ribosomal_S19e	PF01090.14	gi|297526450|ref|YP_003668474.1|	-	0.0085	15.5	0.0	0.014	14.8	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	protein	S19e
MotA_activ	PF09114.5	gi|297526450|ref|YP_003668474.1|	-	0.0094	15.6	0.1	0.011	15.4	0.0	1.1	1	0	0	1	1	1	1	Transcription	factor	MotA,	activation	domain
DUF4364	PF14277.1	gi|297526450|ref|YP_003668474.1|	-	0.011	15.4	0.1	0.015	14.9	0.1	1.3	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4364)
TrmB	PF01978.14	gi|297526450|ref|YP_003668474.1|	-	0.021	14.5	0.1	0.044	13.5	0.0	1.7	1	1	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
FUR	PF01475.14	gi|297526450|ref|YP_003668474.1|	-	0.022	14.6	0.1	0.026	14.4	0.0	1.4	1	0	0	1	1	1	0	Ferric	uptake	regulator	family
Mrr_N	PF14338.1	gi|297526450|ref|YP_003668474.1|	-	0.025	14.6	0.2	0.39	10.8	0.0	2.0	1	1	0	2	2	2	0	Mrr	N-terminal	domain
PadR	PF03551.9	gi|297526450|ref|YP_003668474.1|	-	0.044	13.5	0.1	0.14	11.9	0.0	1.8	1	1	0	1	1	1	0	Transcriptional	regulator	PadR-like	family
RepL	PF05732.6	gi|297526450|ref|YP_003668474.1|	-	0.045	12.9	0.1	0.062	12.5	0.1	1.2	1	0	0	1	1	1	0	Firmicute	plasmid	replication	protein	(RepL)
N6_Mtase	PF02384.11	gi|297526451|ref|YP_003668475.1|	-	2.1e-10	40.1	2.4	8.8e-07	28.2	1.9	2.2	1	1	1	2	2	2	2	N-6	DNA	Methylase
Methyltransf_26	PF13659.1	gi|297526451|ref|YP_003668475.1|	-	1.6e-07	31.3	0.0	4.3e-06	26.7	0.0	2.2	1	1	0	1	1	1	1	Methyltransferase	domain
Eco57I	PF07669.6	gi|297526451|ref|YP_003668475.1|	-	5e-05	23.6	1.8	5e-05	23.6	1.2	2.9	3	1	0	3	3	3	1	Eco57I	restriction-modification	methylase
Methyltransf_23	PF13489.1	gi|297526451|ref|YP_003668475.1|	-	0.00016	21.4	0.0	0.00029	20.6	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
DUF2684	PF10885.3	gi|297526451|ref|YP_003668475.1|	-	0.075	12.8	0.0	0.19	11.5	0.0	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2684)
RE_R_Pab1	PF09522.5	gi|297526452|ref|YP_003668476.1|	-	4.3e-24	84.9	0.2	9.6e-24	83.7	0.1	1.5	2	0	0	2	2	2	1	R.Pab1	restriction	endonuclease
Ald_Xan_dh_C2	PF02738.13	gi|297526453|ref|YP_003668477.1|	-	3.1e-150	501.1	0.0	4.2e-150	500.6	0.0	1.1	1	0	0	1	1	1	1	Molybdopterin-binding	domain	of	aldehyde	dehydrogenase
Ald_Xan_dh_C	PF01315.17	gi|297526453|ref|YP_003668477.1|	-	1.6e-28	98.9	0.3	3.2e-28	98.0	0.2	1.5	1	0	0	1	1	1	1	Aldehyde	oxidase	and	xanthine	dehydrogenase,	a/b	hammerhead	domain
Fer2_2	PF01799.15	gi|297526454|ref|YP_003668478.1|	-	3.7e-27	94.0	0.0	6.7e-27	93.2	0.0	1.4	1	0	0	1	1	1	1	[2Fe-2S]	binding	domain
Fer2	PF00111.22	gi|297526454|ref|YP_003668478.1|	-	3.2e-08	33.2	1.1	6.6e-08	32.1	0.1	1.9	2	0	0	2	2	2	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer2_3	PF13085.1	gi|297526454|ref|YP_003668478.1|	-	7.8e-05	22.4	0.8	0.00012	21.8	0.3	1.6	1	1	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Fer2_4	PF13510.1	gi|297526454|ref|YP_003668478.1|	-	0.0027	17.4	0.4	0.032	14.0	0.2	2.4	1	1	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
FAD_binding_5	PF00941.16	gi|297526455|ref|YP_003668479.1|	-	7.9e-26	90.4	0.0	1.2e-25	89.9	0.0	1.2	1	0	0	1	1	1	1	FAD	binding	domain	in	molybdopterin	dehydrogenase
CO_deh_flav_C	PF03450.12	gi|297526455|ref|YP_003668479.1|	-	3.5e-13	49.3	0.0	5.8e-13	48.6	0.0	1.4	1	0	0	1	1	1	1	CO	dehydrogenase	flavoprotein	C-terminal	domain
Utp13	PF08625.6	gi|297526455|ref|YP_003668479.1|	-	0.03	13.9	0.4	0.055	13.1	0.0	1.5	2	0	0	2	2	2	0	Utp13	specific	WD40	associated	domain
DUF4545	PF15078.1	gi|297526455|ref|YP_003668479.1|	-	0.15	10.9	0.4	0.35	9.7	0.1	1.7	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4545)
PALP	PF00291.20	gi|297526456|ref|YP_003668480.1|	-	7.4e-62	209.3	0.0	8.4e-62	209.1	0.0	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
ABM	PF03992.11	gi|297526456|ref|YP_003668480.1|	-	0.15	12.0	0.0	0.29	11.1	0.0	1.4	1	0	0	1	1	1	0	Antibiotic	biosynthesis	monooxygenase
FG-GAP	PF01839.18	gi|297526457|ref|YP_003668481.1|	-	1.4e-25	88.2	33.5	0.0018	17.9	1.3	8.2	8	0	0	8	8	8	7	FG-GAP	repeat
VCBS	PF13517.1	gi|297526457|ref|YP_003668481.1|	-	1.5e-21	76.4	36.3	6.4e-06	26.4	0.1	6.6	3	2	4	7	7	7	7	Repeat	domain	in	Vibrio,	Colwellia,	Bradyrhizobium	and	Shewanella
BBS2_Mid	PF14783.1	gi|297526457|ref|YP_003668481.1|	-	4.6e-09	36.0	7.2	0.01	15.5	0.0	7.0	6	2	3	9	9	9	2	Ciliary	BBSome	complex	subunit	2,	middle	region
PQQ_3	PF13570.1	gi|297526457|ref|YP_003668481.1|	-	6.2e-08	32.6	21.1	0.01	16.0	0.6	6.9	6	2	1	7	7	7	2	PQQ-like	domain
PQQ	PF01011.16	gi|297526457|ref|YP_003668481.1|	-	6.7e-08	31.7	7.3	0.00011	21.5	0.0	4.6	5	0	0	5	5	5	2	PQQ	enzyme	repeat
PQQ_2	PF13360.1	gi|297526457|ref|YP_003668481.1|	-	1.8e-07	30.8	0.0	0.0079	15.6	0.0	2.7	1	1	1	2	2	2	2	PQQ-like	domain
Tachylectin	PF14517.1	gi|297526457|ref|YP_003668481.1|	-	0.028	13.7	0.5	0.13	11.5	0.3	1.9	1	1	0	1	1	1	0	Tachylectin
Rifin_STEVOR	PF02009.11	gi|297526457|ref|YP_003668481.1|	-	0.24	10.9	0.0	0.35	10.4	0.0	1.2	1	0	0	1	1	1	0	Rifin/stevor	family
Dicty_REP	PF05086.7	gi|297526457|ref|YP_003668481.1|	-	0.25	9.0	4.7	0.35	8.5	3.3	1.1	1	0	0	1	1	1	0	Dictyostelium	(Slime	Mold)	REP	protein
Mucin	PF01456.12	gi|297526457|ref|YP_003668481.1|	-	0.35	10.6	27.2	0.63	9.7	18.9	1.3	1	0	0	1	1	1	0	Mucin-like	glycoprotein
DUF4519	PF15012.1	gi|297526457|ref|YP_003668481.1|	-	0.38	10.6	3.6	0.78	9.6	2.5	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4519)
TMEM154	PF15102.1	gi|297526457|ref|YP_003668481.1|	-	0.41	10.3	7.6	0.72	9.5	5.3	1.4	1	0	0	1	1	1	0	TMEM154	protein	family
ABC_tran	PF00005.22	gi|297526458|ref|YP_003668482.1|	-	2.2e-30	105.7	0.0	3.6e-30	105.0	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297526458|ref|YP_003668482.1|	-	1.9e-13	51.0	5.0	1.6e-07	31.6	0.1	2.9	2	1	1	3	3	3	2	AAA	domain
AAA_15	PF13175.1	gi|297526458|ref|YP_003668482.1|	-	1.3e-05	24.4	0.0	0.0081	15.2	0.0	2.5	2	1	0	3	3	3	2	AAA	ATPase	domain
AAA_23	PF13476.1	gi|297526458|ref|YP_003668482.1|	-	3.9e-05	24.0	1.4	8e-05	23.0	1.0	1.8	1	1	0	1	1	1	1	AAA	domain
SRP54	PF00448.17	gi|297526458|ref|YP_003668482.1|	-	0.00038	19.9	0.1	0.00071	19.0	0.0	1.4	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
AAA_29	PF13555.1	gi|297526458|ref|YP_003668482.1|	-	0.00095	18.6	0.3	0.0017	17.8	0.2	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA	PF00004.24	gi|297526458|ref|YP_003668482.1|	-	0.003	17.7	0.3	0.016	15.3	0.1	2.3	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Zeta_toxin	PF06414.7	gi|297526458|ref|YP_003668482.1|	-	0.0034	16.5	0.0	0.0065	15.5	0.0	1.4	1	0	0	1	1	1	1	Zeta	toxin
UPF0079	PF02367.12	gi|297526458|ref|YP_003668482.1|	-	0.0034	16.9	0.3	0.0092	15.6	0.2	1.7	1	0	0	1	1	1	1	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_17	PF13207.1	gi|297526458|ref|YP_003668482.1|	-	0.0035	18.1	1.0	0.074	13.8	0.7	2.4	1	1	0	1	1	1	1	AAA	domain
AAA_30	PF13604.1	gi|297526458|ref|YP_003668482.1|	-	0.0048	16.4	0.1	0.0098	15.4	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|297526458|ref|YP_003668482.1|	-	0.0076	15.5	0.4	0.75	8.9	0.0	2.2	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
AAA_19	PF13245.1	gi|297526458|ref|YP_003668482.1|	-	0.013	15.2	0.1	0.033	13.9	0.1	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
ArgK	PF03308.11	gi|297526458|ref|YP_003668482.1|	-	0.038	12.7	0.4	0.11	11.1	0.1	1.8	2	0	0	2	2	2	0	ArgK	protein
AAA_14	PF13173.1	gi|297526458|ref|YP_003668482.1|	-	0.039	13.8	0.1	0.36	10.7	0.0	2.5	1	1	1	2	2	2	0	AAA	domain
AAA_10	PF12846.2	gi|297526458|ref|YP_003668482.1|	-	0.043	13.2	0.0	0.1	12.0	0.0	1.6	1	0	0	1	1	1	0	AAA-like	domain
AAA_16	PF13191.1	gi|297526458|ref|YP_003668482.1|	-	0.075	13.0	0.1	0.18	11.8	0.0	1.6	2	0	0	2	2	2	0	AAA	ATPase	domain
MobB	PF03205.9	gi|297526458|ref|YP_003668482.1|	-	0.092	12.4	0.1	0.29	10.8	0.0	1.9	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Arch_ATPase	PF01637.13	gi|297526458|ref|YP_003668482.1|	-	0.093	12.4	1.2	0.26	10.9	0.1	2.3	1	1	2	3	3	3	0	Archaeal	ATPase
NACHT	PF05729.7	gi|297526458|ref|YP_003668482.1|	-	0.098	12.3	0.6	0.41	10.2	0.0	2.2	2	1	0	2	2	2	0	NACHT	domain
AAA_33	PF13671.1	gi|297526458|ref|YP_003668482.1|	-	0.18	11.6	0.0	0.34	10.7	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
ABC2_membrane	PF01061.19	gi|297526459|ref|YP_003668483.1|	-	1.9e-14	53.3	32.7	1.9e-14	53.3	22.7	1.7	1	1	1	2	2	2	1	ABC-2	type	transporter
ABC2_membrane_3	PF12698.2	gi|297526459|ref|YP_003668483.1|	-	1.1e-09	37.8	44.8	1.9e-09	37.0	30.9	1.4	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.2	gi|297526459|ref|YP_003668483.1|	-	0.00041	19.2	29.3	0.0012	17.8	20.3	1.8	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_5	PF13346.1	gi|297526459|ref|YP_003668483.1|	-	0.0063	15.8	46.1	0.028	13.6	32.0	1.9	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|297526459|ref|YP_003668483.1|	-	0.015	14.4	44.5	0.018	14.1	30.8	1.1	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
Fer4_15	PF13459.1	gi|297526460|ref|YP_003668484.1|	-	3.8e-18	65.8	3.1	4.5e-18	65.5	2.1	1.1	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_13	PF13370.1	gi|297526460|ref|YP_003668484.1|	-	2.3e-16	59.9	1.5	3e-16	59.5	1.0	1.2	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_9	PF13187.1	gi|297526460|ref|YP_003668484.1|	-	2.1e-06	27.9	0.6	2.6e-06	27.6	0.4	1.1	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|297526460|ref|YP_003668484.1|	-	0.00089	19.0	1.1	0.0026	17.5	0.8	1.7	1	1	1	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|297526460|ref|YP_003668484.1|	-	0.0094	16.3	5.1	0.33	11.3	0.6	2.3	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|297526460|ref|YP_003668484.1|	-	0.013	15.1	11.8	0.033	13.7	0.8	2.8	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_19	PF06902.6	gi|297526460|ref|YP_003668484.1|	-	0.037	13.8	2.7	0.86	9.4	1.8	2.1	1	1	0	1	1	1	0	Divergent	4Fe-4S	mono-cluster
DUF2114	PF09887.4	gi|297526460|ref|YP_003668484.1|	-	0.044	12.1	0.0	0.044	12.1	0.0	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2114)
Fer4_6	PF12837.2	gi|297526460|ref|YP_003668484.1|	-	0.078	12.8	0.7	0.078	12.8	0.5	2.9	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|297526460|ref|YP_003668484.1|	-	0.1	12.6	0.8	0.22	11.5	0.6	1.7	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|297526460|ref|YP_003668484.1|	-	0.14	12.0	5.7	1.9	8.4	4.0	2.1	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|297526460|ref|YP_003668484.1|	-	0.38	10.7	9.4	0.13	12.2	1.6	2.7	2	1	0	2	2	2	0	4Fe-4S	binding	domain
HTH_20	PF12840.2	gi|297526461|ref|YP_003668485.1|	-	3.5e-09	36.3	0.0	8.1e-09	35.1	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|297526461|ref|YP_003668485.1|	-	0.0027	17.0	0.0	0.0063	15.8	0.0	1.6	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_45	PF14947.1	gi|297526461|ref|YP_003668485.1|	-	0.0078	16.0	0.1	0.02	14.6	0.1	1.7	1	0	0	1	1	1	1	Winged	helix-turn-helix
DUF2690	PF10901.3	gi|297526461|ref|YP_003668485.1|	-	0.027	14.4	0.0	0.077	12.9	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2690)
KH_3	PF13014.1	gi|297526461|ref|YP_003668485.1|	-	0.061	13.0	1.7	4.4	7.0	0.1	3.0	2	0	0	2	2	2	0	KH	domain
DUF650	PF04894.7	gi|297526462|ref|YP_003668486.1|	-	1.7e-106	355.7	0.1	4.7e-106	354.2	0.0	1.8	2	0	0	2	2	2	1	Archaeal	protein	of	unknown	function	(DUF650)
DUF651	PF04895.7	gi|297526462|ref|YP_003668486.1|	-	5.5e-37	125.7	0.1	8.7e-37	125.1	0.0	1.3	1	0	0	1	1	1	1	Archaeal	protein	of	unknown	function	(DUF651)
ATP-synt_F6	PF05511.6	gi|297526462|ref|YP_003668486.1|	-	0.12	12.2	0.1	0.91	9.4	0.0	2.2	2	0	0	2	2	2	0	Mitochondrial	ATP	synthase	coupling	factor	6
Radical_SAM	PF04055.16	gi|297526463|ref|YP_003668487.1|	-	2.5e-07	30.9	0.1	1.1e-06	28.9	0.0	1.8	1	1	1	2	2	2	1	Radical	SAM	superfamily
DUF1848	PF08902.6	gi|297526463|ref|YP_003668487.1|	-	9.2	5.7	7.9	28	4.1	5.1	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1848)
SBP_bac_5	PF00496.17	gi|297526465|ref|YP_003668489.1|	-	9e-74	248.5	7.2	9e-74	248.5	5.0	1.9	2	0	0	2	2	2	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
DUF4097	PF13349.1	gi|297526465|ref|YP_003668489.1|	-	0.1	12.1	1.2	0.26	10.7	0.2	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4097)
SoxE	PF06525.6	gi|297526465|ref|YP_003668489.1|	-	0.12	11.6	6.9	0.24	10.6	4.8	1.4	1	0	0	1	1	1	0	Sulfocyanin	(SoxE)
Mucin	PF01456.12	gi|297526465|ref|YP_003668489.1|	-	5.9	6.6	24.4	10	5.8	16.9	1.2	1	0	0	1	1	1	0	Mucin-like	glycoprotein
BPD_transp_1	PF00528.17	gi|297526466|ref|YP_003668490.1|	-	7.6e-44	149.4	13.8	7.6e-44	149.4	9.5	2.1	2	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.17	gi|297526467|ref|YP_003668491.1|	-	1e-32	113.1	10.5	1e-32	113.1	7.2	2.2	2	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.2	gi|297526467|ref|YP_003668491.1|	-	3.8e-07	29.3	1.5	3.8e-07	29.3	1.1	3.4	5	0	0	5	5	5	1	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
OmdA	PF13376.1	gi|297526467|ref|YP_003668491.1|	-	0.11	12.1	0.2	0.22	11.1	0.1	1.5	1	0	0	1	1	1	0	Bacteriocin-protection,	YdeI	or	OmpD-Associated
ABC_tran	PF00005.22	gi|297526468|ref|YP_003668492.1|	-	1.2e-24	87.1	0.0	1.8e-24	86.5	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|297526468|ref|YP_003668492.1|	-	4.3e-22	78.2	0.4	7.8e-22	77.4	0.3	1.5	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|297526468|ref|YP_003668492.1|	-	2.7e-10	40.6	0.2	5.8e-09	36.3	0.1	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|297526468|ref|YP_003668492.1|	-	0.00053	19.1	0.0	0.0011	18.1	0.0	1.5	1	0	0	1	1	1	1	AAA	ATPase	domain
ATP-synt_ab	PF00006.20	gi|297526468|ref|YP_003668492.1|	-	0.001	18.6	0.1	0.0012	18.4	0.1	1.3	1	1	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_25	PF13481.1	gi|297526468|ref|YP_003668492.1|	-	0.0018	17.7	0.0	0.31	10.4	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
SMC_N	PF02463.14	gi|297526468|ref|YP_003668492.1|	-	0.003	16.8	0.2	0.04	13.1	0.0	2.1	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
AAA	PF00004.24	gi|297526468|ref|YP_003668492.1|	-	0.0045	17.1	0.1	0.71	10.0	0.0	2.3	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_10	PF12846.2	gi|297526468|ref|YP_003668492.1|	-	0.011	15.1	0.0	0.41	10.0	0.0	2.1	1	1	1	2	2	2	0	AAA-like	domain
AAA_22	PF13401.1	gi|297526468|ref|YP_003668492.1|	-	0.041	14.0	1.8	0.54	10.3	1.2	2.1	1	1	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.17	gi|297526468|ref|YP_003668492.1|	-	0.043	13.9	0.0	0.091	12.9	0.0	1.5	1	0	0	1	1	1	0	RNA	helicase
DEAD	PF00270.24	gi|297526468|ref|YP_003668492.1|	-	0.045	13.2	0.2	2.3	7.6	0.0	2.1	2	0	0	2	2	2	0	DEAD/DEAH	box	helicase
AAA_16	PF13191.1	gi|297526468|ref|YP_003668492.1|	-	0.066	13.1	0.0	0.14	12.0	0.0	1.7	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_5	PF07728.9	gi|297526468|ref|YP_003668492.1|	-	0.067	12.9	0.1	0.12	12.0	0.0	1.4	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
Mg_chelatase	PF01078.16	gi|297526468|ref|YP_003668492.1|	-	0.12	11.5	0.0	0.68	9.0	0.0	2.0	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
SbcCD_C	PF13558.1	gi|297526468|ref|YP_003668492.1|	-	0.14	12.0	0.1	0.35	10.7	0.0	1.7	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_29	PF13555.1	gi|297526468|ref|YP_003668492.1|	-	0.17	11.4	0.0	0.4	10.2	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_13	PF13166.1	gi|297526468|ref|YP_003668492.1|	-	0.19	10.1	0.0	0.29	9.5	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
Herpes_ori_bp	PF02399.10	gi|297526468|ref|YP_003668492.1|	-	0.22	9.4	0.1	0.42	8.5	0.0	1.3	1	1	0	1	1	1	0	Origin	of	replication	binding	protein
ABC_tran	PF00005.22	gi|297526469|ref|YP_003668493.1|	-	8.3e-34	116.8	0.0	1.1e-33	116.4	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|297526469|ref|YP_003668493.1|	-	9e-21	74.0	1.3	1.7e-20	73.1	0.9	1.5	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|297526469|ref|YP_003668493.1|	-	5.4e-13	49.5	1.3	3.7e-10	40.2	0.6	2.1	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|297526469|ref|YP_003668493.1|	-	2.6e-06	26.8	0.1	1.2e-05	24.6	0.0	1.8	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA	PF00004.24	gi|297526469|ref|YP_003668493.1|	-	4.3e-05	23.7	0.1	0.00067	19.8	0.0	2.1	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.1	gi|297526469|ref|YP_003668493.1|	-	0.00051	20.1	1.1	0.0039	17.3	0.8	2.0	1	1	0	1	1	1	1	AAA	domain
PRK	PF00485.13	gi|297526469|ref|YP_003668493.1|	-	0.00053	19.5	0.0	0.00081	18.9	0.0	1.3	1	0	0	1	1	1	1	Phosphoribulokinase	/	Uridine	kinase	family
AAA_15	PF13175.1	gi|297526469|ref|YP_003668493.1|	-	0.00056	19.0	0.2	0.015	14.3	0.1	2.1	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_18	PF13238.1	gi|297526469|ref|YP_003668493.1|	-	0.0055	17.0	0.0	0.027	14.7	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
SbcCD_C	PF13558.1	gi|297526469|ref|YP_003668493.1|	-	0.0081	16.0	0.0	0.064	13.1	0.0	2.1	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_10	PF12846.2	gi|297526469|ref|YP_003668493.1|	-	0.0088	15.5	0.6	0.55	9.6	0.0	2.4	1	1	1	2	2	2	1	AAA-like	domain
Mg_chelatase	PF01078.16	gi|297526469|ref|YP_003668493.1|	-	0.0098	15.0	0.0	0.016	14.3	0.0	1.3	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
AAA_29	PF13555.1	gi|297526469|ref|YP_003668493.1|	-	0.012	15.1	0.1	0.02	14.3	0.1	1.3	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_5	PF07728.9	gi|297526469|ref|YP_003668493.1|	-	0.02	14.6	0.2	0.22	11.2	0.1	2.1	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
AAA_13	PF13166.1	gi|297526469|ref|YP_003668493.1|	-	0.051	12.0	0.3	0.38	9.1	0.0	2.1	2	1	0	2	2	2	0	AAA	domain
SRP54	PF00448.17	gi|297526469|ref|YP_003668493.1|	-	0.052	12.9	0.0	0.081	12.3	0.0	1.3	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA_17	PF13207.1	gi|297526469|ref|YP_003668493.1|	-	0.063	14.1	0.0	0.38	11.5	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
AAA_25	PF13481.1	gi|297526469|ref|YP_003668493.1|	-	0.092	12.1	0.1	4.8	6.5	0.1	2.1	2	0	0	2	2	2	0	AAA	domain
AAA_16	PF13191.1	gi|297526469|ref|YP_003668493.1|	-	0.1	12.5	0.5	0.19	11.7	0.1	1.5	2	0	0	2	2	2	0	AAA	ATPase	domain
tRNA_lig_kinase	PF08303.6	gi|297526469|ref|YP_003668493.1|	-	0.12	12.2	0.0	0.19	11.6	0.0	1.2	1	0	0	1	1	1	0	tRNA	ligase	kinase	domain
ATP-synt_ab	PF00006.20	gi|297526469|ref|YP_003668493.1|	-	0.14	11.6	0.0	0.18	11.3	0.0	1.2	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
Sigma54_activat	PF00158.21	gi|297526469|ref|YP_003668493.1|	-	0.17	11.3	0.1	9	5.7	0.0	2.2	2	0	0	2	2	2	0	Sigma-54	interaction	domain
KaiC	PF06745.8	gi|297526469|ref|YP_003668493.1|	-	0.17	10.9	0.8	2.5	7.1	0.2	2.3	2	0	0	2	2	2	0	KaiC
PYC_OADA	PF02436.13	gi|297526470|ref|YP_003668494.1|	-	9.9e-61	204.5	0.0	1.8e-60	203.7	0.0	1.4	1	0	0	1	1	1	1	Conserved	carboxylase	domain
HMGL-like	PF00682.14	gi|297526470|ref|YP_003668494.1|	-	6.7e-41	140.5	0.0	9.4e-41	140.0	0.0	1.1	1	0	0	1	1	1	1	HMGL-like
Biotin_lipoyl	PF00364.17	gi|297526470|ref|YP_003668494.1|	-	1.2e-20	72.8	5.4	2.7e-20	71.7	3.8	1.6	1	0	0	1	1	1	1	Biotin-requiring	enzyme
Biotin_lipoyl_2	PF13533.1	gi|297526470|ref|YP_003668494.1|	-	9.1e-15	54.0	1.5	9.4e-08	31.6	0.0	2.5	1	1	1	2	2	2	2	Biotin-lipoyl	like
HlyD	PF00529.15	gi|297526470|ref|YP_003668494.1|	-	1.7e-07	30.8	0.5	0.0002	20.7	0.0	2.2	1	1	1	2	2	2	2	HlyD	family	secretion	protein
RnfC_N	PF13375.1	gi|297526470|ref|YP_003668494.1|	-	4.6e-06	26.2	1.6	2e-05	24.2	0.2	2.6	3	1	0	3	3	3	1	RnfC	Barrel	sandwich	hybrid	domain
HlyD_2	PF12700.2	gi|297526470|ref|YP_003668494.1|	-	1.2e-05	24.6	0.3	0.0042	16.2	0.1	2.3	1	1	1	2	2	2	2	HlyD	family	secretion	protein
HlyD_3	PF13437.1	gi|297526470|ref|YP_003668494.1|	-	1.6e-05	25.1	0.3	0.016	15.5	0.0	2.7	2	0	0	2	2	2	2	HlyD	family	secretion	protein
GCV_H	PF01597.14	gi|297526470|ref|YP_003668494.1|	-	0.00032	20.3	0.5	0.00093	18.8	0.3	1.7	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
TGT	PF01702.13	gi|297526470|ref|YP_003668494.1|	-	0.0013	18.0	0.0	0.0025	17.1	0.0	1.5	1	0	0	1	1	1	1	Queuine	tRNA-ribosyltransferase
PYNP_C	PF07831.8	gi|297526470|ref|YP_003668494.1|	-	0.027	13.8	3.1	1.4	8.4	0.1	2.5	1	1	1	2	2	2	0	Pyrimidine	nucleoside	phosphorylase	C-terminal	domain
Peptidase_M23	PF01551.17	gi|297526470|ref|YP_003668494.1|	-	0.083	12.9	0.0	0.19	11.7	0.0	1.6	1	0	0	1	1	1	0	Peptidase	family	M23
Phosphodiest	PF01663.17	gi|297526471|ref|YP_003668495.1|	-	4.4e-54	184.1	0.3	5.1e-54	183.9	0.2	1.0	1	0	0	1	1	1	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
Sulfatase	PF00884.18	gi|297526471|ref|YP_003668495.1|	-	0.00077	18.7	0.0	0.0013	17.9	0.0	1.5	1	1	0	1	1	1	1	Sulfatase
DUF229	PF02995.12	gi|297526471|ref|YP_003668495.1|	-	0.033	12.6	0.0	0.045	12.1	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF229)
APS_kinase	PF01583.15	gi|297526472|ref|YP_003668496.1|	-	1.3e-60	203.5	0.0	1.5e-60	203.3	0.0	1.0	1	0	0	1	1	1	1	Adenylylsulphate	kinase
KTI12	PF08433.5	gi|297526472|ref|YP_003668496.1|	-	5e-10	39.0	0.0	5.6e-10	38.8	0.0	1.1	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
AAA_33	PF13671.1	gi|297526472|ref|YP_003668496.1|	-	3.5e-09	36.6	0.0	4.4e-09	36.3	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|297526472|ref|YP_003668496.1|	-	1.2e-07	32.0	0.1	3.6e-07	30.5	0.1	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|297526472|ref|YP_003668496.1|	-	1.2e-06	29.3	0.2	1.6e-06	28.9	0.1	1.4	1	1	0	1	1	1	1	AAA	domain
MobB	PF03205.9	gi|297526472|ref|YP_003668496.1|	-	1.1e-05	25.1	0.0	2.1e-05	24.2	0.0	1.4	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ArgK	PF03308.11	gi|297526472|ref|YP_003668496.1|	-	1.3e-05	24.1	0.0	1.7e-05	23.7	0.0	1.2	1	0	0	1	1	1	1	ArgK	protein
NTPase_1	PF03266.10	gi|297526472|ref|YP_003668496.1|	-	4.8e-05	23.1	0.0	0.00011	21.9	0.0	1.6	2	0	0	2	2	1	1	NTPase
SRP54	PF00448.17	gi|297526472|ref|YP_003668496.1|	-	5.2e-05	22.7	0.0	8.1e-05	22.1	0.0	1.2	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
cobW	PF02492.14	gi|297526472|ref|YP_003668496.1|	-	6.5e-05	22.4	0.0	9.4e-05	21.9	0.0	1.2	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
CbiA	PF01656.18	gi|297526472|ref|YP_003668496.1|	-	0.00015	21.2	0.0	0.00022	20.7	0.0	1.3	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ATP_bind_1	PF03029.12	gi|297526472|ref|YP_003668496.1|	-	0.00042	19.9	0.0	0.00068	19.2	0.0	1.4	1	0	0	1	1	1	1	Conserved	hypothetical	ATP	binding	protein
AAA_19	PF13245.1	gi|297526472|ref|YP_003668496.1|	-	0.00066	19.3	0.1	0.0026	17.4	0.0	2.0	2	0	0	2	2	2	1	Part	of	AAA	domain
AAA_30	PF13604.1	gi|297526472|ref|YP_003668496.1|	-	0.0016	18.0	0.0	0.0024	17.4	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|297526472|ref|YP_003668496.1|	-	0.0042	17.2	0.0	0.0059	16.7	0.0	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Thymidylate_kin	PF02223.12	gi|297526472|ref|YP_003668496.1|	-	0.0046	16.3	0.0	0.024	14.0	0.0	1.9	2	0	0	2	2	2	1	Thymidylate	kinase
AAA_28	PF13521.1	gi|297526472|ref|YP_003668496.1|	-	0.0053	16.7	0.0	0.0082	16.1	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
NACHT	PF05729.7	gi|297526472|ref|YP_003668496.1|	-	0.0053	16.4	0.0	0.0088	15.7	0.0	1.3	1	0	0	1	1	1	1	NACHT	domain
AAA_10	PF12846.2	gi|297526472|ref|YP_003668496.1|	-	0.0063	15.9	0.0	0.0095	15.3	0.0	1.2	1	0	0	1	1	1	1	AAA-like	domain
AAA_16	PF13191.1	gi|297526472|ref|YP_003668496.1|	-	0.0066	16.4	0.0	0.013	15.4	0.0	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
MipZ	PF09140.6	gi|297526472|ref|YP_003668496.1|	-	0.011	14.7	0.0	0.016	14.3	0.0	1.2	1	0	0	1	1	1	0	ATPase	MipZ
AAA_22	PF13401.1	gi|297526472|ref|YP_003668496.1|	-	0.014	15.5	0.0	0.031	14.4	0.0	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_25	PF13481.1	gi|297526472|ref|YP_003668496.1|	-	0.017	14.5	0.3	0.038	13.3	0.1	1.6	1	1	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.17	gi|297526472|ref|YP_003668496.1|	-	0.021	14.9	0.0	0.034	14.3	0.0	1.4	1	0	0	1	1	1	0	RNA	helicase
Mg_chelatase	PF01078.16	gi|297526472|ref|YP_003668496.1|	-	0.025	13.7	0.0	0.1	11.7	0.0	1.8	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
Zeta_toxin	PF06414.7	gi|297526472|ref|YP_003668496.1|	-	0.025	13.6	0.1	0.081	12.0	0.0	1.8	2	1	0	2	2	2	0	Zeta	toxin
AAA_5	PF07728.9	gi|297526472|ref|YP_003668496.1|	-	0.041	13.6	0.0	0.078	12.7	0.0	1.5	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
B12-binding	PF02310.14	gi|297526472|ref|YP_003668496.1|	-	0.041	13.7	0.0	0.07	13.0	0.0	1.3	1	0	0	1	1	1	0	B12	binding	domain
DUF3320	PF11784.3	gi|297526472|ref|YP_003668496.1|	-	0.058	12.9	0.1	0.15	11.5	0.1	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3320)
NB-ARC	PF00931.17	gi|297526472|ref|YP_003668496.1|	-	0.069	12.0	0.0	0.12	11.2	0.0	1.4	1	0	0	1	1	1	0	NB-ARC	domain
LytR_C	PF13399.1	gi|297526472|ref|YP_003668496.1|	-	0.07	13.5	0.0	0.11	12.8	0.0	1.3	1	0	0	1	1	1	0	LytR	cell	envelope-related	transcriptional	attenuator
LpxK	PF02606.9	gi|297526472|ref|YP_003668496.1|	-	0.085	11.7	0.0	0.13	11.2	0.0	1.2	1	0	0	1	1	1	0	Tetraacyldisaccharide-1-P	4'-kinase
Cytidylate_kin2	PF13189.1	gi|297526472|ref|YP_003668496.1|	-	0.092	12.6	0.0	2.2	8.1	0.0	2.3	1	1	1	2	2	2	0	Cytidylate	kinase-like	family
6PF2K	PF01591.13	gi|297526472|ref|YP_003668496.1|	-	0.11	11.5	0.0	0.21	10.6	0.0	1.5	1	0	0	1	1	1	0	6-phosphofructo-2-kinase
SKI	PF01202.17	gi|297526472|ref|YP_003668496.1|	-	0.12	12.2	0.1	0.48	10.2	0.0	2.0	1	1	0	1	1	1	0	Shikimate	kinase
CheR_N	PF03705.10	gi|297526473|ref|YP_003668497.1|	-	0.0022	17.3	0.0	0.0043	16.3	0.0	1.5	1	0	0	1	1	1	1	CheR	methyltransferase,	all-alpha	domain
RHH_1	PF01402.16	gi|297526473|ref|YP_003668497.1|	-	0.0024	17.6	0.0	0.0083	15.9	0.0	1.8	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
DUF3408	PF11888.3	gi|297526473|ref|YP_003668497.1|	-	0.0045	16.9	0.2	0.0051	16.7	0.1	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3408)
Surf_Ag_VNR	PF07244.10	gi|297526473|ref|YP_003668497.1|	-	0.031	14.6	0.5	0.17	12.3	0.2	2.0	1	1	1	2	2	2	0	Surface	antigen	variable	number	repeat
Imm45	PF15603.1	gi|297526473|ref|YP_003668497.1|	-	0.06	13.4	0.1	0.078	13.1	0.1	1.2	1	0	0	1	1	1	0	Immunity	protein	45
HHH_5	PF14520.1	gi|297526473|ref|YP_003668497.1|	-	0.073	13.2	0.0	0.098	12.8	0.0	1.1	1	0	0	1	1	1	0	Helix-hairpin-helix	domain
UBA_3	PF09288.5	gi|297526473|ref|YP_003668497.1|	-	0.086	12.4	0.2	0.21	11.2	0.1	1.6	1	0	0	1	1	1	0	Fungal	ubiquitin-associated	domain
Med30	PF11315.3	gi|297526473|ref|YP_003668497.1|	-	0.12	12.4	0.2	0.14	12.2	0.2	1.1	1	0	0	1	1	1	0	Mediator	complex	subunit	30
Rad50_zn_hook	PF04423.9	gi|297526473|ref|YP_003668497.1|	-	0.17	11.3	0.5	0.17	11.3	0.3	1.6	2	0	0	2	2	2	0	Rad50	zinc	hook	motif
DUF3940	PF13076.1	gi|297526473|ref|YP_003668497.1|	-	0.8	9.3	3.5	0.56	9.7	0.5	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3940)
ATP-sulfurylase	PF01747.12	gi|297526474|ref|YP_003668498.1|	-	3.7e-93	310.7	0.1	5.3e-93	310.2	0.1	1.2	1	0	0	1	1	1	1	ATP-sulfurylase
PUA_2	PF14306.1	gi|297526474|ref|YP_003668498.1|	-	4.5e-57	191.9	0.0	8.9e-57	190.9	0.0	1.5	1	0	0	1	1	1	1	PUA-like	domain
RHH_1	PF01402.16	gi|297526475|ref|YP_003668499.1|	-	2.5e-05	23.9	0.3	0.00019	21.1	0.0	2.0	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
Surf_Ag_VNR	PF07244.10	gi|297526475|ref|YP_003668499.1|	-	0.08	13.3	0.2	0.11	12.9	0.1	1.5	1	1	0	1	1	1	0	Surface	antigen	variable	number	repeat
Na_sulph_symp	PF00939.14	gi|297526476|ref|YP_003668500.1|	-	1.8e-34	119.4	37.3	2.5e-34	118.9	25.9	1.1	1	0	0	1	1	1	1	Sodium:sulfate	symporter	transmembrane	region
CitMHS	PF03600.11	gi|297526476|ref|YP_003668500.1|	-	1.7e-16	59.7	23.1	1.7e-16	59.7	16.0	2.2	1	1	1	2	2	2	1	Citrate	transporter
Metallophos_2	PF12850.2	gi|297526477|ref|YP_003668501.1|	-	1.9e-28	99.2	0.0	2.5e-28	98.8	0.0	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|297526477|ref|YP_003668501.1|	-	5.2e-14	52.1	1.5	7.2e-14	51.6	1.1	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
FBPase_2	PF06874.6	gi|297526477|ref|YP_003668501.1|	-	0.017	13.1	0.3	0.053	11.5	0.2	1.7	1	1	0	1	1	1	0	Firmicute	fructose-1,6-bisphosphatase
tRNA-synt_2	PF00152.15	gi|297526478|ref|YP_003668502.1|	-	1e-48	165.8	0.0	1.9e-48	164.9	0.0	1.4	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
PhosphMutase	PF10143.4	gi|297526479|ref|YP_003668503.1|	-	2.6e-50	170.4	0.0	3.8e-50	169.8	0.0	1.2	1	0	0	1	1	1	1	2,3-bisphosphoglycerate-independent	phosphoglycerate	mutase
Metalloenzyme	PF01676.13	gi|297526479|ref|YP_003668503.1|	-	5.6e-33	114.3	0.0	7.1e-33	114.0	0.0	1.1	1	0	0	1	1	1	1	Metalloenzyme	superfamily
Phosphodiest	PF01663.17	gi|297526479|ref|YP_003668503.1|	-	0.0049	16.2	0.1	0.04	13.2	0.0	2.0	2	0	0	2	2	2	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
Alk_phosphatase	PF00245.15	gi|297526479|ref|YP_003668503.1|	-	0.11	11.1	0.0	0.18	10.4	0.0	1.3	1	0	0	1	1	1	0	Alkaline	phosphatase
DeoC	PF01791.4	gi|297526480|ref|YP_003668504.1|	-	3.4e-42	144.3	0.6	3.8e-42	144.2	0.4	1.0	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
DHO_dh	PF01180.16	gi|297526480|ref|YP_003668504.1|	-	5.6e-06	25.5	2.9	8.8e-06	24.8	1.4	1.7	1	1	1	2	2	2	1	Dihydroorotate	dehydrogenase
DUF2276	PF10040.4	gi|297526482|ref|YP_003668506.1|	-	1.2e-17	64.2	0.0	3.2e-17	62.8	0.0	1.7	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2276)
SSXT	PF05030.7	gi|297526483|ref|YP_003668507.1|	-	0.0033	16.9	0.1	0.0038	16.7	0.1	1.2	1	0	0	1	1	1	1	SSXT	protein	(N-terminal	region)
PIN	PF01850.16	gi|297526484|ref|YP_003668508.1|	-	1.9e-05	24.9	0.7	2.5e-05	24.6	0.5	1.1	1	0	0	1	1	1	1	PIN	domain
Antitoxin-MazE	PF04014.13	gi|297526485|ref|YP_003668509.1|	-	5e-08	32.5	2.0	9.2e-08	31.6	1.4	1.5	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
DctQ	PF04290.7	gi|297526486|ref|YP_003668510.1|	-	0.2	11.4	4.9	0.043	13.5	1.2	1.5	2	0	0	2	2	2	0	Tripartite	ATP-independent	periplasmic	transporters,	DctQ	component
PhaG_MnhG_YufB	PF03334.9	gi|297526486|ref|YP_003668510.1|	-	5.6	7.0	9.1	1.7e+02	2.3	6.3	2.5	1	1	0	1	1	1	0	Na+/H+	antiporter	subunit
zf-DHHC	PF01529.15	gi|297526486|ref|YP_003668510.1|	-	8.8	5.6	6.0	12	5.2	4.1	1.3	1	0	0	1	1	1	0	DHHC	palmitoyltransferase
SLAM	PF06214.6	gi|297526487|ref|YP_003668511.1|	-	0.026	14.4	0.3	0.026	14.4	0.2	1.1	1	0	0	1	1	1	0	Signaling	lymphocytic	activation	molecule	(SLAM)	protein
PCEMA1	PF07418.6	gi|297526487|ref|YP_003668511.1|	-	0.067	12.5	0.5	0.073	12.4	0.3	1.0	1	0	0	1	1	1	0	Acidic	phosphoprotein	precursor	PCEMA1
Phe_tRNA-synt_N	PF02912.13	gi|297526487|ref|YP_003668511.1|	-	0.23	11.2	2.7	0.48	10.1	0.1	2.4	2	1	0	2	2	2	0	Aminoacyl	tRNA	synthetase	class	II,	N-terminal	domain
FrhB_FdhB_C	PF04432.8	gi|297526488|ref|YP_003668512.1|	-	0.015	14.7	0.1	0.018	14.4	0.1	1.0	1	0	0	1	1	1	0	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	C	terminus
Pkinase	PF00069.20	gi|297526489|ref|YP_003668513.1|	-	3.4e-47	160.7	0.0	5.1e-47	160.2	0.0	1.2	1	0	0	1	1	1	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|297526489|ref|YP_003668513.1|	-	6.2e-28	97.5	0.0	1e-27	96.8	0.0	1.3	1	0	0	1	1	1	1	Protein	tyrosine	kinase
APH	PF01636.18	gi|297526489|ref|YP_003668513.1|	-	3.5e-06	26.9	0.0	5.6e-06	26.2	0.0	1.3	1	0	0	1	1	1	1	Phosphotransferase	enzyme	family
Kinase-like	PF14531.1	gi|297526489|ref|YP_003668513.1|	-	0.00034	19.6	0.0	0.00064	18.7	0.0	1.5	1	0	0	1	1	1	1	Kinase-like
ABC1	PF03109.11	gi|297526489|ref|YP_003668513.1|	-	0.006	16.5	0.1	1.7	8.6	0.0	2.7	2	0	0	2	2	2	1	ABC1	family
RIO1	PF01163.17	gi|297526489|ref|YP_003668513.1|	-	0.0061	15.9	0.0	0.042	13.2	0.0	2.3	1	1	1	2	2	2	1	RIO1	family
rve_2	PF13333.1	gi|297526489|ref|YP_003668513.1|	-	0.068	13.2	0.1	0.19	11.8	0.1	1.7	1	0	0	1	1	1	0	Integrase	core	domain
AAA	PF00004.24	gi|297526490|ref|YP_003668514.1|	-	1.2e-16	61.1	0.2	2.1e-15	57.0	0.0	2.7	3	0	0	3	3	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_25	PF13481.1	gi|297526490|ref|YP_003668514.1|	-	5.4e-05	22.6	0.0	0.00015	21.2	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|297526490|ref|YP_003668514.1|	-	0.00011	22.3	0.3	0.0011	19.0	0.0	2.7	3	1	0	3	3	2	1	AAA	domain
AAA_33	PF13671.1	gi|297526490|ref|YP_003668514.1|	-	0.00012	21.9	0.0	0.00034	20.5	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
RNA_helicase	PF00910.17	gi|297526490|ref|YP_003668514.1|	-	0.00012	22.1	0.0	0.00027	21.0	0.0	1.6	1	0	0	1	1	1	1	RNA	helicase
AAA_17	PF13207.1	gi|297526490|ref|YP_003668514.1|	-	0.0004	21.1	5.6	0.00057	20.6	1.3	2.9	2	2	0	2	2	1	1	AAA	domain
Myosin_head	PF00063.16	gi|297526490|ref|YP_003668514.1|	-	0.0005	18.2	0.0	0.0057	14.7	0.0	2.0	2	0	0	2	2	2	1	Myosin	head	(motor	domain)
AAA_16	PF13191.1	gi|297526490|ref|YP_003668514.1|	-	0.00061	19.8	0.0	0.0017	18.4	0.0	1.8	2	0	0	2	2	1	1	AAA	ATPase	domain
AAA_5	PF07728.9	gi|297526490|ref|YP_003668514.1|	-	0.00075	19.2	1.3	0.019	14.6	0.0	3.2	4	1	0	4	4	4	1	AAA	domain	(dynein-related	subfamily)
AAA_10	PF12846.2	gi|297526490|ref|YP_003668514.1|	-	0.00087	18.8	0.3	0.002	17.6	0.0	1.7	2	0	0	2	2	2	1	AAA-like	domain
PduV-EutP	PF10662.4	gi|297526490|ref|YP_003668514.1|	-	0.0027	17.1	0.0	2.4	7.6	0.0	2.5	2	0	0	2	2	2	2	Ethanolamine	utilisation	-	propanediol	utilisation
MobB	PF03205.9	gi|297526490|ref|YP_003668514.1|	-	0.003	17.2	0.3	0.012	15.3	0.0	2.0	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
IstB_IS21	PF01695.12	gi|297526490|ref|YP_003668514.1|	-	0.0032	16.9	0.0	0.014	14.7	0.0	2.0	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
KaiC	PF06745.8	gi|297526490|ref|YP_003668514.1|	-	0.0068	15.5	0.9	0.019	14.0	0.0	2.3	3	0	0	3	3	3	1	KaiC
NACHT	PF05729.7	gi|297526490|ref|YP_003668514.1|	-	0.0074	15.9	0.1	0.021	14.5	0.0	1.8	2	0	0	2	2	1	1	NACHT	domain
ABC_tran	PF00005.22	gi|297526490|ref|YP_003668514.1|	-	0.0087	16.3	0.0	0.022	15.0	0.0	1.7	1	0	0	1	1	1	1	ABC	transporter
MIT	PF04212.13	gi|297526490|ref|YP_003668514.1|	-	0.012	15.4	0.3	0.036	13.9	0.2	1.8	1	0	0	1	1	1	0	MIT	(microtubule	interacting	and	transport)	domain
AAA_24	PF13479.1	gi|297526490|ref|YP_003668514.1|	-	0.013	15.1	0.4	0.054	13.0	0.1	2.0	2	0	0	2	2	2	0	AAA	domain
PhoH	PF02562.11	gi|297526490|ref|YP_003668514.1|	-	0.014	14.5	0.0	0.027	13.7	0.0	1.4	1	0	0	1	1	1	0	PhoH-like	protein
PPV_E1_C	PF00519.12	gi|297526490|ref|YP_003668514.1|	-	0.028	13.0	0.0	0.072	11.7	0.0	1.7	2	0	0	2	2	2	0	Papillomavirus	helicase
FtsK_SpoIIIE	PF01580.13	gi|297526490|ref|YP_003668514.1|	-	0.032	13.6	0.0	0.063	12.7	0.0	1.4	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
AAA_32	PF13654.1	gi|297526490|ref|YP_003668514.1|	-	0.033	12.8	0.9	0.068	11.8	0.0	1.9	3	0	0	3	3	3	0	AAA	domain
SRP54	PF00448.17	gi|297526490|ref|YP_003668514.1|	-	0.041	13.3	0.0	0.078	12.4	0.0	1.4	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
Sigma54_activat	PF00158.21	gi|297526490|ref|YP_003668514.1|	-	0.056	12.9	0.0	0.22	11.0	0.0	1.9	2	0	0	2	2	2	0	Sigma-54	interaction	domain
Mg_chelatase	PF01078.16	gi|297526490|ref|YP_003668514.1|	-	0.067	12.3	0.0	0.11	11.5	0.0	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_18	PF13238.1	gi|297526490|ref|YP_003668514.1|	-	0.068	13.4	0.0	0.068	13.4	0.0	2.6	3	0	0	3	3	2	0	AAA	domain
AAA_19	PF13245.1	gi|297526490|ref|YP_003668514.1|	-	0.078	12.7	0.0	0.19	11.4	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
DUF258	PF03193.11	gi|297526490|ref|YP_003668514.1|	-	0.086	12.0	0.0	0.2	10.8	0.0	1.6	2	0	0	2	2	1	0	Protein	of	unknown	function,	DUF258
T2SE	PF00437.15	gi|297526490|ref|YP_003668514.1|	-	0.086	11.7	0.4	0.25	10.1	0.0	2.1	2	1	0	2	2	2	0	Type	II/IV	secretion	system	protein
UPF0079	PF02367.12	gi|297526490|ref|YP_003668514.1|	-	0.089	12.4	0.0	0.18	11.4	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_30	PF13604.1	gi|297526490|ref|YP_003668514.1|	-	0.16	11.4	0.0	0.38	10.3	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_21	PF13304.1	gi|297526490|ref|YP_003668514.1|	-	0.51	10.2	0.0	0.51	10.2	0.0	3.1	3	1	0	3	3	3	0	AAA	domain
CHASE3	PF05227.8	gi|297526490|ref|YP_003668514.1|	-	1.9	8.1	4.8	1.2	8.7	1.0	2.3	2	1	0	2	2	2	0	CHASE3	domain
DUF1024	PF06260.7	gi|297526491|ref|YP_003668515.1|	-	0.014	15.5	2.1	0.042	13.9	0.2	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1024)
Flu_B_NS1	PF02942.9	gi|297526491|ref|YP_003668515.1|	-	0.12	11.3	3.3	0.19	10.5	2.3	1.5	1	1	0	1	1	1	0	Influenza	B	non-structural	protein	(NS1)
Hormone_1	PF00103.15	gi|297526491|ref|YP_003668515.1|	-	0.12	11.7	0.8	0.35	10.1	0.2	2.0	1	1	1	2	2	2	0	Somatotropin	hormone	family
DUF1104	PF06518.6	gi|297526491|ref|YP_003668515.1|	-	0.66	10.1	11.8	1.1	9.4	2.6	3.0	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1104)
OmpH	PF03938.9	gi|297526491|ref|YP_003668515.1|	-	3.7	7.4	11.2	7.5	6.4	3.6	2.2	2	0	0	2	2	2	0	Outer	membrane	protein	(OmpH-like)
ATP-synt_ab	PF00006.20	gi|297526492|ref|YP_003668516.1|	-	0.091	12.2	0.1	0.11	12.0	0.0	1.2	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
RseC_MucC	PF04246.7	gi|297526494|ref|YP_003668518.1|	-	8.3	5.9	9.5	0.27	10.8	1.0	2.4	3	0	0	3	3	3	0	Positive	regulator	of	sigma(E),	RseC/MucC
ATP-synt_D	PF01813.12	gi|297526495|ref|YP_003668519.1|	-	0.028	13.9	0.1	0.46	10.0	0.0	2.2	2	0	0	2	2	2	0	ATP	synthase	subunit	D
RE_Bsp6I	PF09504.5	gi|297526495|ref|YP_003668519.1|	-	0.033	13.6	0.1	0.055	12.9	0.1	1.3	1	0	0	1	1	1	0	Bsp6I	restriction	endonuclease
AAA_13	PF13166.1	gi|297526496|ref|YP_003668520.1|	-	0.00062	18.3	17.8	0.0011	17.4	12.4	1.4	1	0	0	1	1	1	1	AAA	domain
ApoLp-III	PF07464.6	gi|297526496|ref|YP_003668520.1|	-	0.041	13.9	20.1	1.5	8.7	11.2	2.6	2	0	0	2	2	2	0	Apolipophorin-III	precursor	(apoLp-III)
Bacillus_HBL	PF05791.6	gi|297526496|ref|YP_003668520.1|	-	1.2	8.5	7.2	0.78	9.0	3.4	1.8	2	0	0	2	2	2	0	Bacillus	haemolytic	enterotoxin	(HBL)
HAUS6_N	PF14661.1	gi|297526496|ref|YP_003668520.1|	-	5.7	6.2	19.0	6.6	6.0	0.0	2.9	3	1	0	3	3	3	0	HAUS	augmin-like	complex	subunit	6	N-terminus
Pkinase	PF00069.20	gi|297526497|ref|YP_003668521.1|	-	1.9e-48	164.8	0.0	2.9e-48	164.3	0.0	1.2	1	0	0	1	1	1	1	Protein	kinase	domain
PQQ_3	PF13570.1	gi|297526497|ref|YP_003668521.1|	-	1.8e-35	120.1	38.1	1.2e-07	31.7	0.5	7.5	7	0	0	7	7	7	7	PQQ-like	domain
Pkinase_Tyr	PF07714.12	gi|297526497|ref|YP_003668521.1|	-	1.8e-32	112.4	0.0	3.2e-32	111.6	0.0	1.3	1	0	0	1	1	1	1	Protein	tyrosine	kinase
PQQ	PF01011.16	gi|297526497|ref|YP_003668521.1|	-	2e-23	80.6	13.2	3.7e-05	23.0	0.0	7.5	8	0	0	8	8	7	4	PQQ	enzyme	repeat
WD40	PF00400.27	gi|297526497|ref|YP_003668521.1|	-	1e-20	72.7	17.7	0.00058	19.6	0.0	7.4	7	0	0	7	7	7	5	WD	domain,	G-beta	repeat
PQQ_2	PF13360.1	gi|297526497|ref|YP_003668521.1|	-	1.7e-20	73.4	8.1	1e-10	41.5	0.6	2.8	1	1	2	3	3	3	3	PQQ-like	domain
BBS2_Mid	PF14783.1	gi|297526497|ref|YP_003668521.1|	-	5.8e-09	35.7	0.1	0.021	14.5	0.0	3.9	1	1	2	3	3	3	2	Ciliary	BBSome	complex	subunit	2,	middle	region
RAB3GAP2_N	PF14655.1	gi|297526497|ref|YP_003668521.1|	-	5.5e-05	22.3	3.1	0.5	9.2	0.0	4.5	2	2	4	6	6	6	2	Rab3	GTPase-activating	protein	regulatory	subunit	N-terminus
CPSF_A	PF03178.10	gi|297526497|ref|YP_003668521.1|	-	7.8e-05	21.9	0.0	0.0026	16.8	0.0	2.4	2	0	0	2	2	2	1	CPSF	A	subunit	region
SGL	PF08450.7	gi|297526497|ref|YP_003668521.1|	-	0.00078	18.8	0.1	0.49	9.7	0.0	3.1	2	1	1	3	3	3	1	SMP-30/Gluconolaconase/LRE-like	region
APH	PF01636.18	gi|297526497|ref|YP_003668521.1|	-	0.002	17.8	0.0	0.0043	16.8	0.0	1.5	1	0	0	1	1	1	1	Phosphotransferase	enzyme	family
CARDB	PF07705.6	gi|297526497|ref|YP_003668521.1|	-	0.0032	17.4	0.0	0.021	14.8	0.0	2.4	2	0	0	2	2	1	1	CARDB
DUF4398	PF14346.1	gi|297526497|ref|YP_003668521.1|	-	0.0067	16.4	0.5	0.015	15.3	0.3	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4398)
Kinase-like	PF14531.1	gi|297526497|ref|YP_003668521.1|	-	0.0098	14.8	0.0	0.031	13.2	0.0	1.8	2	0	0	2	2	2	1	Kinase-like
CHASE4	PF05228.8	gi|297526497|ref|YP_003668521.1|	-	0.034	13.7	1.5	53	3.3	0.0	4.3	4	2	0	4	4	4	0	CHASE4	domain
Nucleoporin_N	PF08801.6	gi|297526497|ref|YP_003668521.1|	-	0.062	12.0	0.2	4.2	5.9	0.0	2.3	2	0	0	2	2	2	0	Nup133	N	terminal	like
Kdo	PF06293.9	gi|297526497|ref|YP_003668521.1|	-	0.08	11.9	0.0	0.23	10.4	0.0	1.7	2	0	0	2	2	2	0	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
DsbC_N	PF10411.4	gi|297526497|ref|YP_003668521.1|	-	0.32	10.2	2.1	80	2.6	0.0	4.7	5	0	0	5	5	5	0	Disulfide	bond	isomerase	protein	N-terminus
WW	PF00397.21	gi|297526497|ref|YP_003668521.1|	-	2.4	8.1	14.0	4.8	7.1	0.1	4.3	5	0	0	5	5	4	0	WW	domain
CW_binding_1	PF01473.15	gi|297526497|ref|YP_003668521.1|	-	7.5	6.8	7.3	1.4e+02	2.8	0.0	4.7	5	0	0	5	5	5	0	Putative	cell	wall	binding	repeat
PQQ_3	PF13570.1	gi|297526498|ref|YP_003668522.1|	-	0.021	15.1	0.0	0.03	14.5	0.0	1.2	1	0	0	1	1	1	0	PQQ-like	domain
WD40	PF00400.27	gi|297526498|ref|YP_003668522.1|	-	0.032	14.1	0.9	0.17	11.8	0.0	2.2	1	1	1	2	2	2	0	WD	domain,	G-beta	repeat
DUF2935	PF11155.3	gi|297526499|ref|YP_003668523.1|	-	0.022	14.8	9.2	0.55	10.3	2.5	3.2	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF2935)
Baculo_PEP_C	PF04513.7	gi|297526499|ref|YP_003668523.1|	-	0.038	13.8	5.8	0.43	10.3	1.2	3.2	3	0	0	3	3	3	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
IFT46_B_C	PF12317.3	gi|297526499|ref|YP_003668523.1|	-	0.06	12.7	7.8	1.2	8.4	0.0	2.9	3	0	0	3	3	3	0	Intraflagellar	transport	complex	B	protein	46	C	terminal
DUF883	PF05957.8	gi|297526499|ref|YP_003668523.1|	-	4.2	7.8	14.4	1.9	8.9	0.6	3.2	3	1	0	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF883)
DUF342	PF03961.8	gi|297526500|ref|YP_003668524.1|	-	0.021	13.2	14.2	0.0065	14.9	6.0	2.0	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF342)
Bactofilin	PF04519.8	gi|297526500|ref|YP_003668524.1|	-	0.78	9.7	12.1	0.2	11.7	4.9	2.4	2	1	1	3	3	3	0	Polymer-forming	cytoskeletal
GTP_EFTU_D2	PF03144.20	gi|297526500|ref|YP_003668524.1|	-	2.7	8.1	9.4	5	7.3	0.8	3.6	4	1	0	4	4	4	0	Elongation	factor	Tu	domain	2
Hexapep	PF00132.19	gi|297526500|ref|YP_003668524.1|	-	3.7	7.2	30.8	4.3	7.0	2.9	5.7	4	3	1	5	5	5	0	Bacterial	transferase	hexapeptide	(six	repeats)
RecR	PF02132.10	gi|297526501|ref|YP_003668525.1|	-	0.031	13.7	0.7	0.074	12.4	0.5	1.6	1	0	0	1	1	1	0	RecR	protein
zf-ribbon_3	PF13248.1	gi|297526501|ref|YP_003668525.1|	-	0.069	12.3	5.4	0.51	9.6	3.6	2.1	1	1	1	2	2	2	0	zinc-ribbon	domain
A2L_zn_ribbon	PF08792.5	gi|297526501|ref|YP_003668525.1|	-	0.11	12.0	1.1	7.4	6.1	0.1	2.3	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
zinc_ribbon_2	PF13240.1	gi|297526501|ref|YP_003668525.1|	-	0.98	8.9	8.3	5.3	6.6	5.7	2.1	1	1	0	1	1	1	0	zinc-ribbon	domain
zf-ISL3	PF14690.1	gi|297526501|ref|YP_003668525.1|	-	4.3	7.4	8.1	10	6.2	1.0	2.7	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zinc_ribbon_5	PF13719.1	gi|297526501|ref|YP_003668525.1|	-	5	6.7	8.5	6.7	6.3	0.1	2.7	3	0	0	3	3	3	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|297526501|ref|YP_003668525.1|	-	5.5	6.7	8.5	7.2	6.3	0.1	2.8	3	0	0	3	3	3	0	zinc-ribbon	domain
zf-C2H2	PF00096.21	gi|297526501|ref|YP_003668525.1|	-	6.3	7.3	6.6	23	5.5	0.3	2.4	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
DUF4398	PF14346.1	gi|297526502|ref|YP_003668526.1|	-	0.00017	21.5	2.4	0.0017	18.3	1.7	2.0	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4398)
PTS_IIA	PF02255.11	gi|297526502|ref|YP_003668526.1|	-	0.098	12.5	0.3	0.39	10.6	0.0	1.8	2	0	0	2	2	2	0	PTS	system,	Lactose/Cellobiose	specific	IIA	subunit
Pkinase	PF00069.20	gi|297526503|ref|YP_003668527.1|	-	4.8e-46	157.0	0.0	1.3e-45	155.6	0.0	1.7	2	0	0	2	2	2	1	Protein	kinase	domain
Pkinase_Tyr	PF07714.12	gi|297526503|ref|YP_003668527.1|	-	1.8e-28	99.3	0.0	3.9e-28	98.2	0.0	1.5	1	0	0	1	1	1	1	Protein	tyrosine	kinase
APH	PF01636.18	gi|297526503|ref|YP_003668527.1|	-	0.00021	21.1	0.0	0.00034	20.4	0.0	1.3	1	0	0	1	1	1	1	Phosphotransferase	enzyme	family
HEPN	PF05168.9	gi|297526503|ref|YP_003668527.1|	-	0.00024	20.9	1.6	0.00024	20.9	1.1	3.1	3	1	0	3	3	3	1	HEPN	domain
Kdo	PF06293.9	gi|297526503|ref|YP_003668527.1|	-	0.0043	16.1	0.0	0.015	14.3	0.0	1.9	2	0	0	2	2	2	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
DUF4398	PF14346.1	gi|297526503|ref|YP_003668527.1|	-	0.03	14.3	1.0	0.03	14.3	0.7	2.8	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4398)
TPR_1	PF00515.23	gi|297526503|ref|YP_003668527.1|	-	0.058	13.0	3.7	9.7	5.9	0.7	3.5	3	0	0	3	3	3	0	Tetratricopeptide	repeat
DUF3049	PF11250.3	gi|297526503|ref|YP_003668527.1|	-	0.16	11.7	0.0	0.36	10.6	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3049)
Sec2p	PF06428.6	gi|297526503|ref|YP_003668527.1|	-	0.16	11.8	7.5	0.41	10.5	0.2	3.1	3	0	0	3	3	3	0	GDP/GTP	exchange	factor	Sec2p
TPR_11	PF13414.1	gi|297526503|ref|YP_003668527.1|	-	0.21	11.2	3.9	6.9	6.3	0.6	2.9	2	0	0	2	2	2	0	TPR	repeat
TPR_2	PF07719.12	gi|297526503|ref|YP_003668527.1|	-	0.32	10.9	5.9	13	6.0	0.1	3.6	3	0	0	3	3	3	0	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|297526504|ref|YP_003668528.1|	-	0.00064	19.3	4.5	0.0041	16.7	0.1	3.2	2	1	1	3	3	3	1	TPR	repeat
TPR_2	PF07719.12	gi|297526504|ref|YP_003668528.1|	-	0.057	13.3	6.8	0.37	10.8	0.0	3.7	3	1	1	4	4	4	0	Tetratricopeptide	repeat
MIT	PF04212.13	gi|297526504|ref|YP_003668528.1|	-	0.078	12.8	3.2	0.48	10.3	0.0	2.7	3	1	0	3	3	3	0	MIT	(microtubule	interacting	and	transport)	domain
SHNi-TPR	PF10516.4	gi|297526504|ref|YP_003668528.1|	-	0.079	12.2	1.7	3.1	7.1	0.1	3.2	2	1	0	2	2	2	0	SHNi-TPR
DUF4398	PF14346.1	gi|297526504|ref|YP_003668528.1|	-	0.22	11.6	2.6	0.46	10.5	1.3	1.7	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4398)
TPR_16	PF13432.1	gi|297526504|ref|YP_003668528.1|	-	0.25	12.0	8.5	2	9.1	0.1	2.8	2	1	0	2	2	2	0	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|297526504|ref|YP_003668528.1|	-	0.49	11.1	7.7	12	6.8	1.5	3.0	2	2	1	3	3	3	0	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|297526504|ref|YP_003668528.1|	-	0.51	10.3	3.5	9.2	6.2	0.4	2.5	1	1	1	2	2	2	0	Tetratricopeptide	repeat
Gly_acyl_tr_N	PF06021.6	gi|297526507|ref|YP_003668531.1|	-	0.16	11.3	0.7	0.18	11.1	0.5	1.0	1	0	0	1	1	1	0	Aralkyl	acyl-CoA:amino	acid	N-acyltransferase
RHH_1	PF01402.16	gi|297526508|ref|YP_003668532.1|	-	0.00026	20.7	1.7	0.00026	20.7	1.2	2.4	3	1	0	3	3	3	1	Ribbon-helix-helix	protein,	copG	family
CcdA	PF07362.7	gi|297526508|ref|YP_003668532.1|	-	0.00051	19.8	1.0	0.0047	16.7	0.1	2.0	1	1	1	2	2	2	1	Post-segregation	antitoxin	CcdA
Ribosomal_L9_C	PF03948.9	gi|297526508|ref|YP_003668532.1|	-	0.0076	16.3	0.3	0.1	12.6	0.0	2.0	1	1	1	2	2	2	1	Ribosomal	protein	L9,	C-terminal	domain
Golgin_A5	PF09787.4	gi|297526508|ref|YP_003668532.1|	-	0.039	12.4	0.1	0.045	12.2	0.1	1.0	1	0	0	1	1	1	0	Golgin	subfamily	A	member	5
G-gamma	PF00631.17	gi|297526508|ref|YP_003668532.1|	-	0.059	13.1	1.3	0.68	9.7	0.0	2.1	1	1	1	2	2	2	0	GGL	domain
CRF	PF00473.12	gi|297526508|ref|YP_003668532.1|	-	0.18	11.9	1.4	0.37	10.9	1.0	1.5	1	0	0	1	1	1	0	Corticotropin-releasing	factor	family
PSK_trans_fac	PF07704.6	gi|297526508|ref|YP_003668532.1|	-	0.19	12.4	1.9	0.26	11.9	1.3	1.4	1	1	0	1	1	1	0	Rv0623-like	transcription	factor
DUF2797	PF10977.3	gi|297526509|ref|YP_003668533.1|	-	3.3e-06	26.9	0.4	5.2e-06	26.2	0.2	1.5	1	1	0	1	1	1	1	Protein	of	unknown	function	(DUF2797)
DUF1352	PF07086.7	gi|297526510|ref|YP_003668534.1|	-	9.3	5.8	10.9	9.8	5.7	7.5	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1352)
HD	PF01966.17	gi|297526511|ref|YP_003668535.1|	-	1.1e-08	35.1	1.0	4.2e-08	33.2	0.1	2.5	2	0	0	2	2	2	1	HD	domain
RAMPs	PF03787.10	gi|297526512|ref|YP_003668536.1|	-	7.5e-07	29.2	0.2	1.3e-06	28.4	0.1	1.5	1	1	0	1	1	1	1	RAMP	superfamily
RAMPs	PF03787.10	gi|297526513|ref|YP_003668537.1|	-	9.6e-05	22.3	0.1	0.00025	20.9	0.1	1.7	1	1	0	1	1	1	1	RAMP	superfamily
RAMPs	PF03787.10	gi|297526514|ref|YP_003668538.1|	-	4.8e-13	49.4	0.8	7.1e-13	48.8	0.6	1.2	1	0	0	1	1	1	1	RAMP	superfamily
TcdB_N	PF12918.2	gi|297526515|ref|YP_003668539.1|	-	0.021	14.8	2.5	0.36	10.9	0.9	2.5	2	0	0	2	2	2	0	TcdB	toxin	N-terminal	helical	domain
NUMOD1	PF07453.8	gi|297526516|ref|YP_003668540.1|	-	0.17	11.7	1.7	0.48	10.3	0.4	2.4	2	0	0	2	2	2	0	NUMOD1	domain
Thioredoxin	PF00085.15	gi|297526517|ref|YP_003668541.1|	-	0.003	17.2	0.3	0.0089	15.6	0.2	1.9	1	1	0	1	1	1	1	Thioredoxin
Peptidase_S6	PF02395.11	gi|297526517|ref|YP_003668541.1|	-	0.013	13.7	0.0	0.016	13.3	0.0	1.1	1	0	0	1	1	1	0	Immunoglobulin	A1	protease
Thioredoxin_2	PF13098.1	gi|297526517|ref|YP_003668541.1|	-	0.16	12.1	0.7	0.38	10.9	0.5	1.9	1	1	0	1	1	1	0	Thioredoxin-like	domain
MoCF_biosynth	PF00994.19	gi|297526518|ref|YP_003668542.1|	-	5.1e-27	94.0	0.0	6.1e-27	93.7	0.0	1.0	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
MutL	PF13941.1	gi|297526518|ref|YP_003668542.1|	-	0.0013	17.1	0.0	0.0017	16.7	0.0	1.0	1	0	0	1	1	1	1	MutL	protein
HTH_34	PF13601.1	gi|297526518|ref|YP_003668542.1|	-	0.0071	16.3	0.0	0.011	15.7	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
S-AdoMet_synt_N	PF00438.15	gi|297526518|ref|YP_003668542.1|	-	0.054	13.7	0.1	0.094	12.9	0.1	1.3	1	0	0	1	1	1	0	S-adenosylmethionine	synthetase,	N-terminal	domain
ABC_tran	PF00005.22	gi|297526519|ref|YP_003668543.1|	-	7e-33	113.8	0.0	1.1e-32	113.1	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297526519|ref|YP_003668543.1|	-	1.7e-08	34.7	0.2	0.0034	17.3	0.0	2.6	2	1	0	3	3	3	2	AAA	domain
TOBE	PF03459.12	gi|297526519|ref|YP_003668543.1|	-	2.1e-07	30.9	0.0	0.0029	17.6	0.0	2.7	2	1	0	2	2	2	2	TOBE	domain
TOBE_2	PF08402.5	gi|297526519|ref|YP_003668543.1|	-	6.5e-07	29.2	0.0	2.1e-06	27.6	0.0	1.9	2	0	0	2	2	1	1	TOBE	domain
AAA_15	PF13175.1	gi|297526519|ref|YP_003668543.1|	-	3.3e-05	23.1	0.0	0.0041	16.2	0.0	2.1	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_16	PF13191.1	gi|297526519|ref|YP_003668543.1|	-	0.001	19.1	0.0	0.0018	18.3	0.0	1.5	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA	PF00004.24	gi|297526519|ref|YP_003668543.1|	-	0.001	19.2	0.0	0.016	15.4	0.0	2.3	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Arch_ATPase	PF01637.13	gi|297526519|ref|YP_003668543.1|	-	0.0055	16.4	0.0	0.0089	15.7	0.0	1.4	1	0	0	1	1	1	1	Archaeal	ATPase
Ribosomal_S17	PF00366.15	gi|297526519|ref|YP_003668543.1|	-	0.0059	16.6	0.2	0.029	14.3	0.0	2.2	2	0	0	2	2	2	1	Ribosomal	protein	S17
AAA_22	PF13401.1	gi|297526519|ref|YP_003668543.1|	-	0.0062	16.6	0.6	0.02	15.0	0.4	2.0	1	1	0	1	1	1	1	AAA	domain
Rad17	PF03215.10	gi|297526519|ref|YP_003668543.1|	-	0.0089	14.7	0.0	0.013	14.1	0.0	1.2	1	0	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
AAA_19	PF13245.1	gi|297526519|ref|YP_003668543.1|	-	0.01	15.6	0.0	0.028	14.1	0.0	1.8	1	0	0	1	1	1	1	Part	of	AAA	domain
RNA_helicase	PF00910.17	gi|297526519|ref|YP_003668543.1|	-	0.015	15.4	0.0	0.14	12.3	0.0	2.4	2	0	0	2	2	2	0	RNA	helicase
AAA_28	PF13521.1	gi|297526519|ref|YP_003668543.1|	-	0.021	14.8	0.1	0.04	13.8	0.1	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_18	PF13238.1	gi|297526519|ref|YP_003668543.1|	-	0.026	14.8	0.0	0.097	12.9	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
AAA_14	PF13173.1	gi|297526519|ref|YP_003668543.1|	-	0.034	14.0	0.0	0.12	12.3	0.0	2.0	1	0	0	1	1	1	0	AAA	domain
AAA_5	PF07728.9	gi|297526519|ref|YP_003668543.1|	-	0.058	13.1	0.0	0.14	11.8	0.0	1.6	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
DUF258	PF03193.11	gi|297526519|ref|YP_003668543.1|	-	0.069	12.3	0.0	0.12	11.4	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_29	PF13555.1	gi|297526519|ref|YP_003668543.1|	-	0.072	12.6	0.0	0.18	11.3	0.0	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
DUF2080	PF09853.4	gi|297526519|ref|YP_003668543.1|	-	0.074	12.7	0.7	0.24	11.1	0.0	2.2	2	0	0	2	2	1	0	Putative	transposon-encoded	protein	(DUF2080)
AAA_23	PF13476.1	gi|297526519|ref|YP_003668543.1|	-	0.076	13.3	1.0	0.11	12.8	0.2	1.6	2	0	0	2	2	1	0	AAA	domain
Miro	PF08477.8	gi|297526519|ref|YP_003668543.1|	-	0.082	13.4	0.0	0.53	10.7	0.0	2.3	2	0	0	2	2	2	0	Miro-like	protein
AAA_30	PF13604.1	gi|297526519|ref|YP_003668543.1|	-	0.092	12.3	0.0	0.22	11.1	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_17	PF13207.1	gi|297526519|ref|YP_003668543.1|	-	0.22	12.3	1.2	0.5	11.1	0.5	2.1	2	1	0	2	2	1	0	AAA	domain
BPD_transp_1	PF00528.17	gi|297526520|ref|YP_003668544.1|	-	1.5e-19	70.2	21.1	1.5e-19	70.2	14.6	2.4	1	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.17	gi|297526521|ref|YP_003668545.1|	-	1.9e-10	40.5	23.6	1.9e-10	40.5	16.3	2.9	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
Flp_Fap	PF04964.9	gi|297526521|ref|YP_003668545.1|	-	6.6	6.4	7.5	0.9	9.1	1.4	2.5	2	0	0	2	2	2	0	Flp/Fap	pilin	component
SBP_bac_8	PF13416.1	gi|297526522|ref|YP_003668546.1|	-	3.5e-39	135.2	0.4	3.5e-39	135.2	0.3	1.7	2	0	0	2	2	2	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_1	PF01547.20	gi|297526522|ref|YP_003668546.1|	-	2.8e-34	119.2	5.7	4.1e-34	118.7	3.9	1.2	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_6	PF13343.1	gi|297526522|ref|YP_003668546.1|	-	2.9e-08	33.3	0.2	4.3e-07	29.5	0.0	2.2	2	0	0	2	2	2	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_11	PF13531.1	gi|297526522|ref|YP_003668546.1|	-	7.4e-06	25.7	0.0	1.7e-05	24.5	0.0	1.5	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
NAD_binding_5	PF07994.7	gi|297526523|ref|YP_003668547.1|	-	1.5e-43	149.4	0.0	1.9e-43	149.0	0.0	1.2	1	0	0	1	1	1	1	Myo-inositol-1-phosphate	synthase
Inos-1-P_synth	PF01658.12	gi|297526523|ref|YP_003668547.1|	-	3.1e-25	88.1	0.0	9.3e-25	86.6	0.0	1.9	2	0	0	2	2	2	1	Myo-inositol-1-phosphate	synthase
PadR	PF03551.9	gi|297526524|ref|YP_003668548.1|	-	6.3e-06	25.8	1.5	1.2e-05	24.9	1.1	1.5	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
Mrr_N	PF14338.1	gi|297526524|ref|YP_003668548.1|	-	0.001	19.1	0.0	0.12	12.4	0.0	2.3	2	0	0	2	2	2	1	Mrr	N-terminal	domain
HTH_27	PF13463.1	gi|297526524|ref|YP_003668548.1|	-	0.0091	16.2	0.0	0.024	14.9	0.0	1.7	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_45	PF14947.1	gi|297526524|ref|YP_003668548.1|	-	0.013	15.2	1.6	0.02	14.7	0.7	1.6	1	1	0	1	1	1	0	Winged	helix-turn-helix
HTH_12	PF08461.5	gi|297526524|ref|YP_003668548.1|	-	0.017	14.8	2.7	0.055	13.2	1.9	1.9	1	1	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
TrmB	PF01978.14	gi|297526524|ref|YP_003668548.1|	-	0.046	13.4	0.2	0.12	12.1	0.2	1.6	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
Penicillinase_R	PF03965.11	gi|297526524|ref|YP_003668548.1|	-	0.057	13.5	0.0	0.076	13.1	0.0	1.3	1	0	0	1	1	1	0	Penicillinase	repressor
DUF4364	PF14277.1	gi|297526524|ref|YP_003668548.1|	-	0.079	12.5	0.2	0.11	12.0	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4364)
Ribosomal_L23	PF00276.15	gi|297526524|ref|YP_003668548.1|	-	0.082	12.8	0.3	0.15	12.0	0.1	1.4	1	1	0	1	1	1	0	Ribosomal	protein	L23
tRNA-synt_2	PF00152.15	gi|297526525|ref|YP_003668549.1|	-	2.4e-88	296.1	0.5	3.2e-88	295.7	0.4	1.1	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA-synt_2d	PF01409.15	gi|297526525|ref|YP_003668549.1|	-	0.0089	15.2	0.4	0.034	13.3	0.1	2.0	2	0	0	2	2	2	1	tRNA	synthetases	class	II	core	domain	(F)
ADPrib_exo_Tox	PF03496.9	gi|297526525|ref|YP_003668549.1|	-	0.046	12.9	0.2	0.085	12.0	0.1	1.3	1	0	0	1	1	1	0	ADP-ribosyltransferase	exoenzyme
PaRep2b	PF07775.6	gi|297526525|ref|YP_003668549.1|	-	0.12	10.5	0.0	0.33	9.1	0.0	1.6	2	0	0	2	2	2	0	PaRep2b	protein
NOG1	PF06858.9	gi|297526525|ref|YP_003668549.1|	-	0.14	12.0	0.0	9.5	6.1	0.0	2.5	2	0	0	2	2	2	0	Nucleolar	GTP-binding	protein	1	(NOG1)
DUF3782	PF12644.2	gi|297526525|ref|YP_003668549.1|	-	0.17	11.6	0.7	0.56	10.0	0.0	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3782)
Ribosomal_L35Ae	PF01247.13	gi|297526526|ref|YP_003668550.1|	-	1.1e-09	37.9	0.5	1.9e-09	37.1	0.3	1.4	1	1	0	1	1	1	1	Ribosomal	protein	L35Ae
Mnd1	PF03962.10	gi|297526527|ref|YP_003668551.1|	-	0.016	14.8	2.2	0.023	14.3	1.5	1.3	1	1	0	1	1	1	0	Mnd1	family
TPP_enzyme_C	PF02775.16	gi|297526529|ref|YP_003668553.1|	-	7.3e-24	84.0	0.7	3.8e-23	81.7	0.2	2.4	3	0	0	3	3	3	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
POR_N	PF01855.14	gi|297526529|ref|YP_003668553.1|	-	1.1e-14	54.5	0.3	7e-14	51.8	0.1	2.1	2	0	0	2	2	2	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Fer4	PF00037.22	gi|297526529|ref|YP_003668553.1|	-	4.7e-11	41.7	11.0	7.1e-08	31.7	2.5	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|297526529|ref|YP_003668553.1|	-	6.1e-08	32.1	10.0	4e-05	23.2	1.3	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|297526529|ref|YP_003668553.1|	-	6.5e-08	32.2	7.6	1.5e-07	31.1	5.3	1.7	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|297526529|ref|YP_003668553.1|	-	1.4e-06	27.8	11.2	0.00082	19.1	1.6	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|297526529|ref|YP_003668553.1|	-	1.8e-06	28.2	9.4	1.8e-06	28.2	6.5	2.5	2	1	1	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|297526529|ref|YP_003668553.1|	-	1.9e-06	27.5	10.8	0.002	17.9	2.4	2.5	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|297526529|ref|YP_003668553.1|	-	3.2e-06	27.2	9.2	8.5e-06	25.9	6.4	1.8	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Transket_pyr	PF02779.19	gi|297526529|ref|YP_003668553.1|	-	0.00023	20.6	0.0	0.001	18.6	0.0	2.0	2	0	0	2	2	2	1	Transketolase,	pyrimidine	binding	domain
Fer4_4	PF12800.2	gi|297526529|ref|YP_003668553.1|	-	0.00025	21.1	12.5	0.027	14.7	1.8	2.7	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|297526529|ref|YP_003668553.1|	-	0.00053	20.6	4.8	0.0019	18.8	0.3	2.6	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
TPP_enzyme_N	PF02776.13	gi|297526529|ref|YP_003668553.1|	-	0.00071	19.1	0.3	0.0031	17.0	0.1	2.1	2	0	0	2	2	2	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
Fer4_17	PF13534.1	gi|297526529|ref|YP_003668553.1|	-	0.0067	16.7	4.2	0.068	13.5	0.3	2.6	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|297526529|ref|YP_003668553.1|	-	0.0081	16.1	10.0	0.046	13.7	7.1	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|297526529|ref|YP_003668553.1|	-	0.037	14.5	6.5	0.037	14.5	4.5	3.4	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Intein_splicing	PF14890.1	gi|297526529|ref|YP_003668553.1|	-	0.096	11.5	0.0	0.18	10.6	0.0	1.3	1	0	0	1	1	1	0	Intein	splicing	domain
Fer4_15	PF13459.1	gi|297526529|ref|YP_003668553.1|	-	0.34	11.4	10.9	1.7	9.2	1.4	2.9	1	1	1	2	2	2	0	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.1	gi|297526529|ref|YP_003668553.1|	-	0.75	10.2	11.5	0.47	10.9	1.4	3.1	3	0	0	3	3	2	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|297526529|ref|YP_003668553.1|	-	6.1	7.3	10.8	15	6.0	1.7	2.8	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
POR	PF01558.13	gi|297526530|ref|YP_003668554.1|	-	1e-32	113.4	0.0	1.3e-32	113.1	0.0	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
Epimerase	PF01370.16	gi|297526531|ref|YP_003668555.1|	-	9.9e-54	182.2	0.0	1.4e-53	181.8	0.0	1.2	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
3Beta_HSD	PF01073.14	gi|297526531|ref|YP_003668555.1|	-	1.5e-25	89.4	0.0	1.9e-25	89.1	0.0	1.1	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
RmlD_sub_bind	PF04321.12	gi|297526531|ref|YP_003668555.1|	-	1.6e-19	69.8	0.0	2e-19	69.5	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Polysacc_synt_2	PF02719.10	gi|297526531|ref|YP_003668555.1|	-	2.2e-16	59.6	0.0	1.2e-15	57.2	0.0	1.8	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.7	gi|297526531|ref|YP_003668555.1|	-	3.7e-11	42.4	0.1	8.2e-10	38.0	0.0	2.3	1	1	0	1	1	1	1	Male	sterility	protein
NAD_binding_10	PF13460.1	gi|297526531|ref|YP_003668555.1|	-	4e-11	43.2	0.0	1.5e-10	41.3	0.0	1.9	1	1	1	2	2	2	1	NADH(P)-binding
NmrA	PF05368.8	gi|297526531|ref|YP_003668555.1|	-	1.5e-10	40.7	0.0	6.5e-10	38.6	0.0	1.8	1	1	0	1	1	1	1	NmrA-like	family
adh_short	PF00106.20	gi|297526531|ref|YP_003668555.1|	-	1.1e-08	35.2	0.0	6.9e-08	32.5	0.0	2.1	1	1	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|297526531|ref|YP_003668555.1|	-	0.0052	16.4	0.2	0.065	12.8	0.1	2.1	1	1	0	1	1	1	1	KR	domain
DUF2671	PF10877.3	gi|297526531|ref|YP_003668555.1|	-	0.028	14.1	0.2	0.18	11.6	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2671)
Prefoldin_2	PF01920.15	gi|297526532|ref|YP_003668556.1|	-	9.4e-05	22.1	4.6	9.4e-05	22.1	3.2	1.9	2	0	0	2	2	1	1	Prefoldin	subunit
DUF2205	PF10224.4	gi|297526532|ref|YP_003668556.1|	-	0.011	15.3	2.5	0.019	14.5	1.7	1.3	1	0	0	1	1	1	0	Predicted	coiled-coil	protein	(DUF2205)
NTR2	PF15458.1	gi|297526532|ref|YP_003668556.1|	-	0.014	14.6	6.9	0.017	14.3	4.8	1.1	1	0	0	1	1	1	0	Nineteen	complex-related	protein	2
IncA	PF04156.9	gi|297526532|ref|YP_003668556.1|	-	0.016	14.7	4.7	0.016	14.7	3.3	1.8	2	0	0	2	2	2	0	IncA	protein
Cep57_MT_bd	PF06657.8	gi|297526532|ref|YP_003668556.1|	-	0.018	14.9	0.6	0.038	13.9	0.4	1.5	1	0	0	1	1	1	0	Centrosome	microtubule-binding	domain	of	Cep57
GrpE	PF01025.14	gi|297526532|ref|YP_003668556.1|	-	0.022	14.3	0.1	0.023	14.2	0.1	1.2	1	0	0	1	1	1	0	GrpE
FliJ	PF02050.11	gi|297526532|ref|YP_003668556.1|	-	0.023	14.7	0.4	0.023	14.7	0.3	2.0	2	0	0	2	2	2	0	Flagellar	FliJ	protein
TBPIP	PF07106.8	gi|297526532|ref|YP_003668556.1|	-	0.027	14.0	1.5	0.049	13.1	1.0	1.3	1	0	0	1	1	1	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
RasGAP_C	PF03836.10	gi|297526532|ref|YP_003668556.1|	-	0.033	13.8	0.3	0.033	13.8	0.2	1.3	2	0	0	2	2	1	0	RasGAP	C-terminus
Prefoldin	PF02996.12	gi|297526532|ref|YP_003668556.1|	-	0.041	13.5	1.3	0.041	13.5	0.9	1.6	2	0	0	2	2	2	0	Prefoldin	subunit
DUF1319	PF07028.6	gi|297526532|ref|YP_003668556.1|	-	0.048	13.8	2.1	0.084	13.0	1.5	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1319)
Transposase_22	PF02994.9	gi|297526532|ref|YP_003668556.1|	-	0.055	11.9	0.1	0.073	11.5	0.1	1.1	1	0	0	1	1	1	0	L1	transposable	element
DUF342	PF03961.8	gi|297526532|ref|YP_003668556.1|	-	0.073	11.4	0.0	0.087	11.2	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
DUF4140	PF13600.1	gi|297526532|ref|YP_003668556.1|	-	0.086	13.2	0.6	0.086	13.2	0.4	1.6	2	0	0	2	2	1	0	N-terminal	domain	of	unknown	function	(DUF4140)
ATP-synt_D	PF01813.12	gi|297526532|ref|YP_003668556.1|	-	0.11	12.0	2.2	0.13	11.7	1.5	1.1	1	0	0	1	1	1	0	ATP	synthase	subunit	D
AAA_23	PF13476.1	gi|297526532|ref|YP_003668556.1|	-	0.11	12.8	1.5	0.14	12.4	1.0	1.2	1	0	0	1	1	1	0	AAA	domain
AAA_32	PF13654.1	gi|297526532|ref|YP_003668556.1|	-	0.12	11.0	1.7	0.17	10.5	1.2	1.1	1	0	0	1	1	1	0	AAA	domain
DUF4407	PF14362.1	gi|297526532|ref|YP_003668556.1|	-	0.14	11.1	0.4	0.18	10.7	0.3	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4407)
AAA_13	PF13166.1	gi|297526532|ref|YP_003668556.1|	-	0.17	10.3	1.2	0.23	9.8	0.9	1.1	1	0	0	1	1	1	0	AAA	domain
EMP24_GP25L	PF01105.19	gi|297526532|ref|YP_003668556.1|	-	0.17	11.5	0.4	0.25	11.0	0.3	1.2	1	0	0	1	1	1	0	emp24/gp25L/p24	family/GOLD
TMF_DNA_bd	PF12329.3	gi|297526532|ref|YP_003668556.1|	-	0.19	11.5	7.4	0.31	10.8	5.2	1.3	1	0	0	1	1	1	0	TATA	element	modulatory	factor	1	DNA	binding
V_ATPase_I	PF01496.14	gi|297526532|ref|YP_003668556.1|	-	0.19	9.5	0.3	0.19	9.5	0.2	1.1	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
PhoU	PF01895.14	gi|297526532|ref|YP_003668556.1|	-	0.29	11.5	2.1	0.38	11.2	1.5	1.1	1	0	0	1	1	1	0	PhoU	domain
Metal_resist	PF13801.1	gi|297526532|ref|YP_003668556.1|	-	0.39	10.7	7.2	0.49	10.3	0.5	2.1	1	1	1	2	2	2	0	Heavy-metal	resistance
Fib_alpha	PF08702.5	gi|297526532|ref|YP_003668556.1|	-	1.5	8.9	4.9	0.28	11.2	0.2	1.8	2	0	0	2	2	2	0	Fibrinogen	alpha/beta	chain	family
Med9	PF07544.8	gi|297526532|ref|YP_003668556.1|	-	2.9	7.6	9.4	0.095	12.4	2.4	1.6	2	0	0	2	2	1	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
DUF1730	PF08331.5	gi|297526532|ref|YP_003668556.1|	-	3.6	7.3	7.5	5.5	6.7	0.0	3.0	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF1730)
Tektin	PF03148.9	gi|297526532|ref|YP_003668556.1|	-	4.1	5.8	11.6	0.019	13.5	2.2	1.3	2	0	0	2	2	1	0	Tektin	family
PAT1	PF09770.4	gi|297526532|ref|YP_003668556.1|	-	4.3	5.4	18.8	4.6	5.3	13.0	1.0	1	0	0	1	1	1	0	Topoisomerase	II-associated	protein	PAT1
Ax_dynein_light	PF10211.4	gi|297526532|ref|YP_003668556.1|	-	5	6.9	8.4	0.31	10.8	1.9	1.7	2	0	0	2	2	2	0	Axonemal	dynein	light	chain
DUF2802	PF10975.3	gi|297526532|ref|YP_003668556.1|	-	6.4	6.6	9.7	0.89	9.3	0.2	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2802)
DUF16	PF01519.11	gi|297526532|ref|YP_003668556.1|	-	8	6.7	7.8	21	5.3	5.4	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	DUF16
IL6	PF00489.12	gi|297526532|ref|YP_003668556.1|	-	8.4	5.9	6.4	0.36	10.4	0.2	1.7	2	0	0	2	2	2	0	Interleukin-6/G-CSF/MGF	family
Nitro_FeMo-Co	PF02579.12	gi|297526535|ref|YP_003668559.1|	-	1.4e-15	57.1	0.0	1.9e-15	56.7	0.0	1.1	1	0	0	1	1	1	1	Dinitrogenase	iron-molybdenum	cofactor
MarC	PF01914.12	gi|297526536|ref|YP_003668560.1|	-	3.2e-39	134.1	16.5	3.7e-39	133.9	11.4	1.0	1	0	0	1	1	1	1	MarC	family	integral	membrane	protein
ABC_tran	PF00005.22	gi|297526538|ref|YP_003668562.1|	-	1.9e-29	102.7	0.0	2.9e-29	102.1	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297526538|ref|YP_003668562.1|	-	4.1e-10	40.0	0.2	9.2e-08	32.3	0.1	2.3	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|297526538|ref|YP_003668562.1|	-	2.8e-05	23.4	0.1	0.00026	20.2	0.0	2.0	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|297526538|ref|YP_003668562.1|	-	0.00019	20.5	2.0	0.0045	16.0	0.4	2.2	1	1	0	2	2	2	1	AAA	ATPase	domain
SbcCD_C	PF13558.1	gi|297526538|ref|YP_003668562.1|	-	0.0026	17.6	0.0	0.023	14.5	0.0	2.0	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
DUF258	PF03193.11	gi|297526538|ref|YP_003668562.1|	-	0.017	14.3	0.0	0.03	13.5	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_22	PF13401.1	gi|297526538|ref|YP_003668562.1|	-	0.018	15.1	0.0	0.049	13.7	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
AAA_24	PF13479.1	gi|297526538|ref|YP_003668562.1|	-	0.023	14.3	0.1	0.059	12.9	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
IstB_IS21	PF01695.12	gi|297526538|ref|YP_003668562.1|	-	0.027	13.8	0.0	0.061	12.7	0.0	1.5	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
NACHT	PF05729.7	gi|297526538|ref|YP_003668562.1|	-	0.044	13.4	0.1	0.1	12.2	0.0	1.6	2	0	0	2	2	2	0	NACHT	domain
FtsK_SpoIIIE	PF01580.13	gi|297526538|ref|YP_003668562.1|	-	0.1	12.0	0.0	0.18	11.2	0.0	1.3	1	0	0	1	1	1	0	FtsK/SpoIIIE	family
AAA_16	PF13191.1	gi|297526538|ref|YP_003668562.1|	-	0.1	12.5	0.0	0.21	11.5	0.0	1.5	1	0	0	1	1	1	0	AAA	ATPase	domain
AAA_33	PF13671.1	gi|297526538|ref|YP_003668562.1|	-	0.15	11.9	0.1	0.27	11.1	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|297526538|ref|YP_003668562.1|	-	0.18	12.0	0.6	1	9.5	0.0	2.1	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
BPD_transp_1	PF00528.17	gi|297526539|ref|YP_003668563.1|	-	2.9e-19	69.3	14.0	2.9e-19	69.3	9.7	2.0	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
DUF2627	PF11118.3	gi|297526539|ref|YP_003668563.1|	-	0.043	13.9	3.6	0.05	13.7	0.1	2.9	2	1	0	3	3	3	0	Protein	of	unknown	function	(DUF2627)
SBP_bac_11	PF13531.1	gi|297526540|ref|YP_003668564.1|	-	9.9e-33	113.6	0.0	1.3e-32	113.2	0.0	1.1	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_1	PF01547.20	gi|297526540|ref|YP_003668564.1|	-	3.2e-08	33.6	0.0	5.2e-08	32.9	0.0	1.4	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
PBP_like_2	PF12849.2	gi|297526540|ref|YP_003668564.1|	-	0.085	12.3	0.0	0.45	9.9	0.0	1.9	2	0	0	2	2	2	0	PBP	superfamily	domain
PBP_like	PF12727.2	gi|297526541|ref|YP_003668565.1|	-	4.8e-44	149.6	0.0	6.6e-44	149.1	0.0	1.1	1	0	0	1	1	1	1	PBP	superfamily	domain
HTH_1	PF00126.22	gi|297526541|ref|YP_003668565.1|	-	1.2e-06	28.1	0.1	2e-06	27.4	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
120_Rick_ant	PF12574.3	gi|297526541|ref|YP_003668565.1|	-	0.027	13.5	0.2	0.041	12.9	0.1	1.2	1	0	0	1	1	1	0	120	KDa	Rickettsia	surface	antigen
OTCace	PF00185.19	gi|297526542|ref|YP_003668566.1|	-	2.3e-39	134.8	0.0	8.2e-39	133.0	0.0	1.9	3	0	0	3	3	3	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
OTCace_N	PF02729.16	gi|297526542|ref|YP_003668566.1|	-	4.3e-37	126.9	0.0	7.5e-37	126.1	0.0	1.4	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
Acetyltransf_1	PF00583.19	gi|297526542|ref|YP_003668566.1|	-	0.066	13.2	1.0	0.29	11.1	0.1	2.4	3	0	0	3	3	3	0	Acetyltransferase	(GNAT)	family
Methyltransf_31	PF13847.1	gi|297526542|ref|YP_003668566.1|	-	0.078	12.5	0.0	1.9	8.0	0.0	2.4	3	0	0	3	3	3	0	Methyltransferase	domain
Aminotran_1_2	PF00155.16	gi|297526544|ref|YP_003668568.1|	-	2.1e-73	247.3	0.0	2.4e-73	247.1	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
DegT_DnrJ_EryC1	PF01041.12	gi|297526544|ref|YP_003668568.1|	-	5e-12	45.5	0.0	8.1e-12	44.8	0.0	1.3	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Aminotran_5	PF00266.14	gi|297526544|ref|YP_003668568.1|	-	1e-09	37.6	0.0	4.6e-09	35.4	0.0	1.8	2	0	0	2	2	2	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.16	gi|297526544|ref|YP_003668568.1|	-	5.2e-09	35.6	0.0	7.2e-09	35.1	0.0	1.1	1	0	0	1	1	1	1	Beta-eliminating	lyase
Cys_Met_Meta_PP	PF01053.15	gi|297526544|ref|YP_003668568.1|	-	2.3e-06	26.1	0.0	4e-06	25.3	0.0	1.3	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
rve_3	PF13683.1	gi|297526544|ref|YP_003668568.1|	-	0.15	11.6	0.0	0.33	10.5	0.0	1.6	1	0	0	1	1	1	0	Integrase	core	domain
Met_gamma_lyase	PF06838.6	gi|297526544|ref|YP_003668568.1|	-	0.16	10.2	0.0	0.28	9.4	0.0	1.3	1	0	0	1	1	1	0	Methionine	gamma-lyase
DUF89	PF01937.14	gi|297526545|ref|YP_003668569.1|	-	1.1e-37	129.7	0.0	1.3e-37	129.3	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF89
SBP_bac_5	PF00496.17	gi|297526546|ref|YP_003668570.1|	-	1.2e-07	30.8	0.0	1.4e-07	30.7	0.0	1.0	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
DUF1654	PF07867.6	gi|297526548|ref|YP_003668572.1|	-	0.0032	16.8	0.1	0.0041	16.4	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1654)
BCL_N	PF04714.8	gi|297526548|ref|YP_003668572.1|	-	0.07	12.7	0.0	0.092	12.3	0.0	1.2	1	0	0	1	1	1	0	BCL7,	N-terminal	conserver	region
DNA_pol_B	PF00136.16	gi|297526549|ref|YP_003668573.1|	-	4.5e-26	91.6	0.0	7.5e-26	90.9	0.0	1.2	1	0	0	1	1	1	1	DNA	polymerase	family	B
DUF4144	PF13642.1	gi|297526549|ref|YP_003668573.1|	-	0.12	12.7	0.0	0.43	10.9	0.0	2.0	1	0	0	1	1	1	0	protein	structure	with	unknown	function
OppC_N	PF12911.2	gi|297526550|ref|YP_003668574.1|	-	0.13	11.6	1.5	0.21	10.9	1.0	1.3	1	0	0	1	1	1	0	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
ODV-E18	PF10717.4	gi|297526550|ref|YP_003668574.1|	-	0.72	9.3	3.6	1.2	8.6	2.5	1.3	1	0	0	1	1	1	0	Occlusion-derived	virus	envelope	protein	ODV-E18
DUF4064	PF13273.1	gi|297526551|ref|YP_003668575.1|	-	0.001	19.1	0.8	0.97	9.5	0.0	2.3	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF4064)
DUF1049	PF06305.6	gi|297526551|ref|YP_003668575.1|	-	9.6	5.7	6.0	3.7	7.0	0.0	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1049)
Arch_flagellin	PF01917.11	gi|297526553|ref|YP_003668577.1|	-	0.84	9.2	5.0	8	6.0	0.0	2.2	2	0	0	2	2	2	0	Archaebacterial	flagellin
ABC_tran	PF00005.22	gi|297526554|ref|YP_003668578.1|	-	1.7e-23	83.4	0.0	2.9e-23	82.6	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297526554|ref|YP_003668578.1|	-	1.3e-11	45.0	7.3	4.8e-08	33.3	5.1	2.4	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|297526554|ref|YP_003668578.1|	-	1.2e-07	31.1	0.9	3.6e-05	23.1	0.1	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|297526554|ref|YP_003668578.1|	-	1.3e-07	32.1	1.4	1.7e-07	31.7	1.0	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|297526554|ref|YP_003668578.1|	-	3.5e-06	26.3	11.1	0.00043	19.4	0.1	2.6	2	1	0	3	3	3	2	AAA	ATPase	domain
AAA_29	PF13555.1	gi|297526554|ref|YP_003668578.1|	-	0.0049	16.3	0.1	0.012	15.1	0.0	1.6	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
T2SE	PF00437.15	gi|297526554|ref|YP_003668578.1|	-	0.0071	15.2	0.0	0.012	14.5	0.0	1.5	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA	PF00004.24	gi|297526554|ref|YP_003668578.1|	-	0.012	15.8	0.3	0.068	13.3	0.2	2.2	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.1	gi|297526554|ref|YP_003668578.1|	-	0.015	15.4	0.4	0.05	13.7	0.3	1.9	1	1	0	1	1	1	0	AAA	domain
NACHT	PF05729.7	gi|297526554|ref|YP_003668578.1|	-	0.016	14.8	0.5	0.07	12.7	0.1	2.0	2	0	0	2	2	2	0	NACHT	domain
AAA_30	PF13604.1	gi|297526554|ref|YP_003668578.1|	-	0.025	14.1	0.0	0.044	13.3	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_13	PF13166.1	gi|297526554|ref|YP_003668578.1|	-	0.025	13.0	0.2	0.025	13.0	0.1	2.1	2	0	0	2	2	2	0	AAA	domain
AAA_10	PF12846.2	gi|297526554|ref|YP_003668578.1|	-	0.03	13.7	0.1	0.047	13.1	0.0	1.4	1	0	0	1	1	1	0	AAA-like	domain
SbcCD_C	PF13558.1	gi|297526554|ref|YP_003668578.1|	-	0.048	13.5	0.0	0.11	12.4	0.0	1.6	1	0	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
ABC_ATPase	PF09818.4	gi|297526554|ref|YP_003668578.1|	-	0.071	11.6	0.1	0.16	10.5	0.0	1.5	1	0	0	1	1	1	0	Predicted	ATPase	of	the	ABC	class
MobB	PF03205.9	gi|297526554|ref|YP_003668578.1|	-	0.076	12.7	0.4	0.19	11.4	0.3	1.8	1	1	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_17	PF13207.1	gi|297526554|ref|YP_003668578.1|	-	0.088	13.6	1.5	0.75	10.6	1.0	2.4	1	1	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.7	gi|297526554|ref|YP_003668578.1|	-	0.09	11.8	0.1	0.2	10.7	0.0	1.6	2	0	0	2	2	2	0	Zeta	toxin
AAA_33	PF13671.1	gi|297526554|ref|YP_003668578.1|	-	0.11	12.3	0.1	0.25	11.2	0.1	1.9	2	1	0	2	2	1	0	AAA	domain
AAA_19	PF13245.1	gi|297526554|ref|YP_003668578.1|	-	0.12	12.1	0.0	0.25	11.1	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
DUF1508	PF07411.7	gi|297526554|ref|YP_003668578.1|	-	0.86	9.0	5.0	8.8	5.8	0.0	2.8	3	0	0	3	3	2	0	Domain	of	unknown	function	(DUF1508)
FGGY_N	PF00370.16	gi|297526555|ref|YP_003668579.1|	-	1.8e-71	240.3	0.0	2.6e-71	239.7	0.0	1.3	1	0	0	1	1	1	1	FGGY	family	of	carbohydrate	kinases,	N-terminal	domain
FGGY_C	PF02782.11	gi|297526555|ref|YP_003668579.1|	-	1.8e-59	200.6	0.0	9e-59	198.4	0.0	1.9	2	0	0	2	2	2	1	FGGY	family	of	carbohydrate	kinases,	C-terminal	domain
BcrAD_BadFG	PF01869.15	gi|297526555|ref|YP_003668579.1|	-	0.0028	16.9	0.1	0.15	11.3	0.0	2.2	2	0	0	2	2	2	2	BadF/BadG/BcrA/BcrD	ATPase	family
MFS_1	PF07690.11	gi|297526556|ref|YP_003668580.1|	-	1.4e-33	116.1	41.3	1.4e-33	116.1	28.6	1.5	2	0	0	2	2	2	1	Major	Facilitator	Superfamily
ATG22	PF11700.3	gi|297526556|ref|YP_003668580.1|	-	0.00063	18.3	34.3	0.33	9.3	23.8	4.5	1	1	0	1	1	1	1	Vacuole	effluxer	Atg22	like
Abhydrolase_5	PF12695.2	gi|297526557|ref|YP_003668581.1|	-	8.1e-26	90.5	0.0	1.3e-25	89.8	0.0	1.3	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Peptidase_S15	PF02129.13	gi|297526557|ref|YP_003668581.1|	-	1.7e-22	80.1	0.2	2.4e-15	56.7	0.1	2.1	1	1	0	2	2	2	2	X-Pro	dipeptidyl-peptidase	(S15	family)
Abhydrolase_6	PF12697.2	gi|297526557|ref|YP_003668581.1|	-	1.5e-21	77.3	0.0	8.1e-21	74.9	0.0	1.9	1	1	0	1	1	1	1	Alpha/beta	hydrolase	family
Peptidase_S9	PF00326.16	gi|297526557|ref|YP_003668581.1|	-	3.2e-18	65.7	0.1	1.6e-08	34.0	0.0	2.1	2	0	0	2	2	2	2	Prolyl	oligopeptidase	family
DLH	PF01738.13	gi|297526557|ref|YP_003668581.1|	-	1.2e-13	50.8	0.1	2.6e-06	26.8	0.0	2.2	2	0	0	2	2	2	2	Dienelactone	hydrolase	family
Abhydrolase_1	PF00561.15	gi|297526557|ref|YP_003668581.1|	-	3e-10	40.0	0.0	9.3e-07	28.6	0.0	2.1	1	1	1	2	2	2	2	alpha/beta	hydrolase	fold
FSH1	PF03959.8	gi|297526557|ref|YP_003668581.1|	-	6.4e-10	38.8	0.0	5.1e-09	35.8	0.0	2.0	2	0	0	2	2	2	1	Serine	hydrolase	(FSH1)
BAAT_C	PF08840.6	gi|297526557|ref|YP_003668581.1|	-	4.1e-09	36.4	0.1	1.8e-08	34.3	0.0	2.0	1	1	0	1	1	1	1	BAAT	/	Acyl-CoA	thioester	hydrolase	C	terminal
AXE1	PF05448.7	gi|297526557|ref|YP_003668581.1|	-	2.1e-07	29.7	0.5	1.4e-05	23.7	0.0	2.9	2	1	1	3	3	3	1	Acetyl	xylan	esterase	(AXE1)
Hydrolase_4	PF12146.3	gi|297526557|ref|YP_003668581.1|	-	9.8e-06	25.3	0.0	2e-05	24.3	0.0	1.5	1	0	0	1	1	1	1	Putative	lysophospholipase
Abhydrolase_2	PF02230.11	gi|297526557|ref|YP_003668581.1|	-	0.00012	21.5	0.0	0.65	9.4	0.0	2.9	2	1	0	3	3	3	2	Phospholipase/Carboxylesterase
PhoPQ_related	PF10142.4	gi|297526557|ref|YP_003668581.1|	-	0.00032	19.2	0.1	0.0014	17.2	0.0	1.8	2	0	0	2	2	2	1	PhoPQ-activated	pathogenicity-related	protein
DUF676	PF05057.9	gi|297526557|ref|YP_003668581.1|	-	0.00038	19.8	0.0	0.00054	19.3	0.0	1.4	1	1	0	1	1	1	1	Putative	serine	esterase	(DUF676)
Esterase	PF00756.15	gi|297526557|ref|YP_003668581.1|	-	0.0011	18.4	0.0	0.0014	18.0	0.0	1.3	1	0	0	1	1	1	1	Putative	esterase
DUF829	PF05705.9	gi|297526557|ref|YP_003668581.1|	-	0.0012	18.6	0.0	0.0022	17.7	0.0	1.4	1	1	0	1	1	1	1	Eukaryotic	protein	of	unknown	function	(DUF829)
PGAP1	PF07819.8	gi|297526557|ref|YP_003668581.1|	-	0.0014	18.2	0.0	0.0037	16.8	0.0	1.7	2	0	0	2	2	2	1	PGAP1-like	protein
DUF2048	PF09752.4	gi|297526557|ref|YP_003668581.1|	-	0.0053	15.6	0.0	0.049	12.4	0.0	2.0	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2048)
Abhydrolase_7	PF12715.2	gi|297526557|ref|YP_003668581.1|	-	0.0056	15.6	0.1	0.013	14.4	0.1	1.5	1	1	1	2	2	2	1	Abhydrolase	family
DUF2636	PF11120.3	gi|297526557|ref|YP_003668581.1|	-	0.0067	15.9	1.6	2.4	7.7	0.6	2.6	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF2636)
Abhydrolase_3	PF07859.8	gi|297526557|ref|YP_003668581.1|	-	0.015	14.8	0.0	0.031	13.8	0.0	1.6	1	1	0	1	1	1	0	alpha/beta	hydrolase	fold
Lipase_3	PF01764.20	gi|297526557|ref|YP_003668581.1|	-	0.018	14.6	0.1	0.032	13.8	0.0	1.6	2	0	0	2	2	2	0	Lipase	(class	3)
Chlorophyllase2	PF12740.2	gi|297526557|ref|YP_003668581.1|	-	0.035	13.0	0.0	0.07	12.0	0.0	1.5	1	0	0	1	1	1	0	Chlorophyllase	enzyme
HGTP_anticodon	PF03129.15	gi|297526557|ref|YP_003668581.1|	-	0.088	12.7	0.1	0.69	9.8	0.1	2.5	2	1	0	2	2	2	0	Anticodon	binding	domain
Lipase	PF00151.14	gi|297526557|ref|YP_003668581.1|	-	0.089	11.9	0.0	0.14	11.3	0.0	1.2	1	0	0	1	1	1	0	Lipase
Abhydro_lipase	PF04083.11	gi|297526557|ref|YP_003668581.1|	-	0.097	12.0	0.0	0.2	11.0	0.0	1.5	1	0	0	1	1	1	0	Partial	alpha/beta-hydrolase	lipase	region
LIP	PF03583.9	gi|297526557|ref|YP_003668581.1|	-	0.11	11.7	0.0	2	7.5	0.0	2.1	2	0	0	2	2	2	0	Secretory	lipase
IncA	PF04156.9	gi|297526557|ref|YP_003668581.1|	-	0.11	12.1	2.6	0.32	10.5	0.6	2.0	2	0	0	2	2	2	0	IncA	protein
DUF2621	PF11084.3	gi|297526557|ref|YP_003668581.1|	-	0.63	9.7	3.8	6.2	6.5	0.0	2.7	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2621)
GDPD	PF03009.12	gi|297526558|ref|YP_003668582.1|	-	7.4e-28	97.7	0.0	2.5e-27	96.0	0.0	1.7	1	1	0	1	1	1	1	Glycerophosphoryl	diester	phosphodiesterase	family
Glyco_hydro_10	PF00331.15	gi|297526558|ref|YP_003668582.1|	-	0.0057	15.7	0.0	0.0079	15.2	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	hydrolase	family	10
DUF1667	PF07892.6	gi|297526559|ref|YP_003668583.1|	-	8.2e-34	115.1	2.4	1.2e-33	114.6	1.7	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1667)
Molybdop_Fe4S4	PF04879.11	gi|297526559|ref|YP_003668583.1|	-	0.00022	20.9	2.4	0.00064	19.4	1.7	1.8	1	1	0	1	1	1	1	Molybdopterin	oxidoreductase	Fe4S4	domain
Pyr_redox_2	PF07992.9	gi|297526560|ref|YP_003668584.1|	-	1.5e-22	80.4	5.5	2.6e-20	73.1	3.8	3.7	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|297526560|ref|YP_003668584.1|	-	5.4e-13	48.7	0.2	3.4e-09	36.5	0.0	2.6	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
FAD_binding_2	PF00890.19	gi|297526560|ref|YP_003668584.1|	-	1.1e-12	47.5	8.9	2.3e-06	26.7	0.2	4.6	2	2	3	5	5	5	3	FAD	binding	domain
Pyr_redox_3	PF13738.1	gi|297526560|ref|YP_003668584.1|	-	1.2e-11	45.0	0.1	7.4e-08	32.7	0.1	3.1	1	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|297526560|ref|YP_003668584.1|	-	2.9e-09	36.3	8.9	5.7e-05	22.1	0.4	3.7	3	1	1	4	4	4	3	FAD	dependent	oxidoreductase
Pyr_redox	PF00070.22	gi|297526560|ref|YP_003668584.1|	-	7e-09	35.9	5.2	0.01	16.2	0.0	4.4	4	0	0	4	4	4	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|297526560|ref|YP_003668584.1|	-	1.6e-08	33.9	3.9	2.7e-05	23.3	0.0	2.5	2	0	0	2	2	2	2	FAD	binding	domain
HI0933_like	PF03486.9	gi|297526560|ref|YP_003668584.1|	-	8.4e-08	31.0	2.9	4.1e-05	22.2	0.1	4.3	5	0	0	5	5	5	1	HI0933-like	protein
FAD_oxidored	PF12831.2	gi|297526560|ref|YP_003668584.1|	-	6.5e-07	28.7	0.0	1.8e-06	27.3	0.0	1.7	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Amino_oxidase	PF01593.19	gi|297526560|ref|YP_003668584.1|	-	9.1e-07	28.2	0.1	3.9e-06	26.2	0.1	1.9	2	0	0	2	2	2	1	Flavin	containing	amine	oxidoreductase
Thi4	PF01946.12	gi|297526560|ref|YP_003668584.1|	-	1.9e-05	23.8	0.8	0.0017	17.5	0.0	3.0	3	0	0	3	3	3	1	Thi4	family
NAD_binding_7	PF13241.1	gi|297526560|ref|YP_003668584.1|	-	4.1e-05	23.7	0.1	0.02	15.1	0.0	2.5	2	0	0	2	2	2	1	Putative	NAD(P)-binding
GIDA	PF01134.17	gi|297526560|ref|YP_003668584.1|	-	5.5e-05	22.2	3.2	0.0055	15.6	0.1	3.6	3	1	1	4	4	4	1	Glucose	inhibited	division	protein	A
Shikimate_DH	PF01488.15	gi|297526560|ref|YP_003668584.1|	-	0.0012	18.9	1.1	0.98	9.5	0.0	2.5	2	0	0	2	2	2	2	Shikimate	/	quinate	5-dehydrogenase
ELFV_dehydrog	PF00208.16	gi|297526560|ref|YP_003668584.1|	-	0.0057	16.2	0.3	0.017	14.7	0.0	1.8	2	0	0	2	2	2	1	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
F420_oxidored	PF03807.12	gi|297526560|ref|YP_003668584.1|	-	0.0068	16.8	2.2	0.29	11.5	0.2	2.6	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
adh_short	PF00106.20	gi|297526560|ref|YP_003668584.1|	-	0.013	15.3	0.0	1.1	9.1	0.0	2.3	2	0	0	2	2	2	0	short	chain	dehydrogenase
UDPG_MGDP_dh_N	PF03721.9	gi|297526560|ref|YP_003668584.1|	-	0.035	13.4	0.8	0.58	9.5	0.4	2.3	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
AlaDh_PNT_C	PF01262.16	gi|297526560|ref|YP_003668584.1|	-	0.057	12.9	1.3	2.9	7.4	0.6	2.5	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
ApbA	PF02558.11	gi|297526560|ref|YP_003668584.1|	-	0.059	12.8	2.1	1.3	8.4	0.1	2.3	2	0	0	2	2	2	0	Ketopantoate	reductase	PanE/ApbA
NAD_binding_9	PF13454.1	gi|297526560|ref|YP_003668584.1|	-	0.08	12.7	3.6	0.13	12.0	0.1	2.4	2	0	0	2	2	2	0	FAD-NAD(P)-binding
Lycopene_cycl	PF05834.7	gi|297526560|ref|YP_003668584.1|	-	0.093	11.6	4.0	0.083	11.7	0.3	2.2	2	0	0	2	2	2	0	Lycopene	cyclase	protein
ThiF	PF00899.16	gi|297526560|ref|YP_003668584.1|	-	0.23	11.2	2.7	4.5	7.0	1.2	2.9	3	0	0	3	3	3	0	ThiF	family
TrkA_N	PF02254.13	gi|297526560|ref|YP_003668584.1|	-	0.34	10.9	2.8	27	4.8	0.0	2.7	3	0	0	3	3	2	0	TrkA-N	domain
GMC_oxred_N	PF00732.14	gi|297526560|ref|YP_003668584.1|	-	0.62	9.1	1.8	10	5.1	0.0	3.2	3	1	1	4	4	4	0	GMC	oxidoreductase
DAO	PF01266.19	gi|297526561|ref|YP_003668585.1|	-	4.7e-67	226.4	0.0	5.5e-67	226.1	0.0	1.0	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Fer2_BFD	PF04324.10	gi|297526561|ref|YP_003668585.1|	-	2.7e-08	33.7	0.5	6.7e-08	32.4	0.4	1.7	1	0	0	1	1	1	1	BFD-like	[2Fe-2S]	binding	domain
NAD_binding_8	PF13450.1	gi|297526561|ref|YP_003668585.1|	-	3.1e-06	27.1	0.0	6.7e-06	26.0	0.0	1.6	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
TrkA_N	PF02254.13	gi|297526561|ref|YP_003668585.1|	-	3.8e-06	26.8	0.9	0.00015	21.7	0.1	2.7	2	0	0	2	2	2	1	TrkA-N	domain
Pyr_redox	PF00070.22	gi|297526561|ref|YP_003668585.1|	-	1.5e-05	25.3	5.1	0.0063	16.9	0.1	2.9	3	0	0	3	3	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.9	gi|297526561|ref|YP_003668585.1|	-	9.2e-05	22.4	0.3	0.0025	17.7	0.2	2.3	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.7	gi|297526561|ref|YP_003668585.1|	-	0.00021	20.3	0.1	0.0046	15.9	0.0	2.2	2	0	0	2	2	2	1	Lycopene	cyclase	protein
NAD_binding_9	PF13454.1	gi|297526561|ref|YP_003668585.1|	-	0.00028	20.7	1.7	0.015	15.0	0.1	2.3	2	0	0	2	2	2	1	FAD-NAD(P)-binding
Saccharop_dh	PF03435.13	gi|297526561|ref|YP_003668585.1|	-	0.00099	18.1	0.0	0.002	17.1	0.0	1.5	1	0	0	1	1	1	1	Saccharopine	dehydrogenase
Thi4	PF01946.12	gi|297526561|ref|YP_003668585.1|	-	0.0011	18.0	3.3	0.011	14.8	0.1	2.5	2	0	0	2	2	2	1	Thi4	family
Trp_halogenase	PF04820.9	gi|297526561|ref|YP_003668585.1|	-	0.0015	17.2	0.4	1.3	7.5	0.1	2.8	3	0	0	3	3	3	2	Tryptophan	halogenase
K_oxygenase	PF13434.1	gi|297526561|ref|YP_003668585.1|	-	0.0026	16.7	0.0	0.0038	16.1	0.0	1.2	1	0	0	1	1	1	1	L-lysine	6-monooxygenase	(NADPH-requiring)
ThiF	PF00899.16	gi|297526561|ref|YP_003668585.1|	-	0.0094	15.7	0.3	0.23	11.2	0.0	2.3	2	0	0	2	2	2	1	ThiF	family
Amino_oxidase	PF01593.19	gi|297526561|ref|YP_003668585.1|	-	0.01	14.9	0.0	0.022	13.8	0.0	1.5	2	0	0	2	2	2	0	Flavin	containing	amine	oxidoreductase
HI0933_like	PF03486.9	gi|297526561|ref|YP_003668585.1|	-	0.012	14.0	0.3	0.21	10.0	0.0	2.2	2	0	0	2	2	2	0	HI0933-like	protein
Pyr_redox_3	PF13738.1	gi|297526561|ref|YP_003668585.1|	-	0.021	14.9	0.0	0.093	12.7	0.0	1.9	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_3	PF01494.14	gi|297526561|ref|YP_003668585.1|	-	0.029	13.4	0.0	0.047	12.7	0.0	1.3	1	0	0	1	1	1	0	FAD	binding	domain
3HCDH_N	PF02737.13	gi|297526561|ref|YP_003668585.1|	-	0.041	13.5	0.0	0.091	12.4	0.0	1.6	1	0	0	1	1	1	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
AlaDh_PNT_C	PF01262.16	gi|297526561|ref|YP_003668585.1|	-	0.041	13.4	0.0	0.15	11.5	0.0	1.9	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
FAD_binding_2	PF00890.19	gi|297526561|ref|YP_003668585.1|	-	0.056	12.2	0.0	0.18	10.5	0.0	1.8	1	1	0	1	1	1	0	FAD	binding	domain
tRNA-synt_2d	PF01409.15	gi|297526562|ref|YP_003668586.1|	-	4.1e-78	261.9	0.0	5.5e-78	261.5	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	II	core	domain	(F)
tRNA-synt_2	PF00152.15	gi|297526562|ref|YP_003668586.1|	-	2.9e-07	29.5	1.2	0.015	14.1	0.0	3.0	3	0	0	3	3	3	2	tRNA	synthetases	class	II	(D,	K	and	N)
MarR	PF01047.17	gi|297526562|ref|YP_003668586.1|	-	3.7e-06	26.5	0.8	8.1e-05	22.2	0.0	2.3	2	0	0	2	2	2	1	MarR	family
HTH_DeoR	PF08220.7	gi|297526562|ref|YP_003668586.1|	-	2.3e-05	23.8	0.3	7.3e-05	22.2	0.1	1.9	2	0	0	2	2	2	1	DeoR-like	helix-turn-helix	domain
HTH_27	PF13463.1	gi|297526562|ref|YP_003668586.1|	-	0.00022	21.4	0.4	0.016	15.4	0.1	2.6	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_20	PF12840.2	gi|297526562|ref|YP_003668586.1|	-	0.0005	19.8	0.2	0.0017	18.1	0.2	2.0	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR_2	PF12802.2	gi|297526562|ref|YP_003668586.1|	-	0.00052	19.6	1.4	0.0023	17.5	0.1	2.3	2	0	0	2	2	2	1	MarR	family
HTH_11	PF08279.7	gi|297526562|ref|YP_003668586.1|	-	0.002	17.7	1.9	0.0025	17.4	0.1	2.1	2	0	0	2	2	2	1	HTH	domain
TrmB	PF01978.14	gi|297526562|ref|YP_003668586.1|	-	0.0046	16.6	2.8	0.06	13.0	0.1	3.0	2	1	1	3	3	3	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_5	PF01022.15	gi|297526562|ref|YP_003668586.1|	-	0.022	14.4	0.0	0.044	13.4	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
IF2_N	PF04760.10	gi|297526562|ref|YP_003668586.1|	-	0.06	13.0	0.1	0.21	11.2	0.0	2.0	2	0	0	2	2	2	0	Translation	initiation	factor	IF-2,	N-terminal	region
LexA_DNA_bind	PF01726.11	gi|297526562|ref|YP_003668586.1|	-	0.085	12.4	0.1	0.29	10.7	0.0	1.9	1	0	0	1	1	1	0	LexA	DNA	binding	domain
HTH_Crp_2	PF13545.1	gi|297526562|ref|YP_003668586.1|	-	0.089	12.6	2.7	2.3	8.0	0.0	2.8	2	1	1	3	3	3	0	Crp-like	helix-turn-helix	domain
UPF0278	PF08745.6	gi|297526563|ref|YP_003668587.1|	-	1.9e-52	177.5	0.6	2.2e-52	177.3	0.4	1.0	1	0	0	1	1	1	1	UPF0278	family
Nol1_Nop2_Fmu	PF01189.12	gi|297526564|ref|YP_003668588.1|	-	1.1e-30	107.0	0.0	1.5e-30	106.5	0.0	1.1	1	0	0	1	1	1	1	NOL1/NOP2/sun	family
Methyltransf_31	PF13847.1	gi|297526564|ref|YP_003668588.1|	-	0.11	12.0	0.0	1	8.9	0.0	2.1	2	0	0	2	2	2	0	Methyltransferase	domain
Radical_SAM	PF04055.16	gi|297526565|ref|YP_003668589.1|	-	5.3e-10	39.7	0.1	3.3e-09	37.1	0.0	1.7	1	1	1	2	2	2	2	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|297526565|ref|YP_003668589.1|	-	0.0035	17.4	0.0	0.061	13.4	0.0	2.4	2	1	1	3	3	3	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|297526565|ref|YP_003668589.1|	-	0.013	15.5	0.0	0.27	11.2	0.0	2.4	2	0	0	2	2	2	0	4Fe-4S	single	cluster	domain
PspB	PF06667.7	gi|297526566|ref|YP_003668590.1|	-	0.0059	16.5	1.6	0.0061	16.4	1.1	1.1	1	0	0	1	1	1	1	Phage	shock	protein	B
bZIP_2	PF07716.10	gi|297526566|ref|YP_003668590.1|	-	0.006	16.3	1.4	0.0068	16.2	0.9	1.1	1	0	0	1	1	1	1	Basic	region	leucine	zipper
HR1	PF02185.11	gi|297526566|ref|YP_003668590.1|	-	0.0072	16.0	1.2	0.008	15.9	0.9	1.1	1	0	0	1	1	1	1	Hr1	repeat
Borrelia_orfD	PF02999.9	gi|297526566|ref|YP_003668590.1|	-	0.016	15.2	0.2	0.018	15.1	0.1	1.0	1	0	0	1	1	1	0	Borrelia	orf-D	family
DUF1192	PF06698.6	gi|297526566|ref|YP_003668590.1|	-	0.02	14.7	2.3	0.025	14.3	1.6	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1192)
Prefoldin_2	PF01920.15	gi|297526566|ref|YP_003668590.1|	-	0.038	13.7	0.8	0.04	13.6	0.5	1.1	1	0	0	1	1	1	0	Prefoldin	subunit
GP41	PF00517.12	gi|297526566|ref|YP_003668590.1|	-	0.05	13.1	0.3	0.05	13.1	0.2	1.0	1	0	0	1	1	1	0	Retroviral	envelope	protein
Prefoldin	PF02996.12	gi|297526566|ref|YP_003668590.1|	-	0.05	13.2	0.5	0.052	13.1	0.4	1.0	1	0	0	1	1	1	0	Prefoldin	subunit
XhlA	PF10779.4	gi|297526566|ref|YP_003668590.1|	-	0.052	13.4	1.7	0.053	13.4	1.1	1.1	1	0	0	1	1	1	0	Haemolysin	XhlA
DUF1664	PF07889.7	gi|297526566|ref|YP_003668590.1|	-	0.061	13.1	0.4	0.063	13.0	0.2	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1664)
FlaC_arch	PF05377.6	gi|297526566|ref|YP_003668590.1|	-	0.066	13.1	0.8	0.098	12.5	0.5	1.2	1	0	0	1	1	1	0	Flagella	accessory	protein	C	(FlaC)
Ax_dynein_light	PF10211.4	gi|297526566|ref|YP_003668590.1|	-	0.073	12.8	0.3	0.075	12.8	0.2	1.0	1	0	0	1	1	1	0	Axonemal	dynein	light	chain
DUF4200	PF13863.1	gi|297526566|ref|YP_003668590.1|	-	0.074	12.9	1.3	0.077	12.9	0.9	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4200)
Vac_Fusion	PF02346.11	gi|297526566|ref|YP_003668590.1|	-	0.076	12.4	0.4	0.088	12.2	0.3	1.2	1	0	0	1	1	1	0	Chordopoxvirus	fusion	protein
Tropomyosin_1	PF12718.2	gi|297526566|ref|YP_003668590.1|	-	0.095	12.5	0.2	0.095	12.5	0.1	1.0	1	0	0	1	1	1	0	Tropomyosin	like
Tropomyosin	PF00261.15	gi|297526566|ref|YP_003668590.1|	-	0.11	11.5	0.6	0.11	11.5	0.4	1.0	1	0	0	1	1	1	0	Tropomyosin
BLOC1_2	PF10046.4	gi|297526566|ref|YP_003668590.1|	-	0.11	12.6	0.9	0.12	12.5	0.6	1.1	1	0	0	1	1	1	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
DivIC	PF04977.10	gi|297526566|ref|YP_003668590.1|	-	0.12	11.9	1.0	0.11	11.9	0.7	1.1	1	0	0	1	1	1	0	Septum	formation	initiator
DegS	PF05384.6	gi|297526566|ref|YP_003668590.1|	-	0.14	11.3	1.8	0.15	11.2	1.3	1.0	1	0	0	1	1	1	0	Sensor	protein	DegS
Transposase_22	PF02994.9	gi|297526566|ref|YP_003668590.1|	-	0.16	10.4	1.4	0.15	10.4	1.0	1.0	1	0	0	1	1	1	0	L1	transposable	element
Med4	PF10018.4	gi|297526566|ref|YP_003668590.1|	-	0.17	11.2	1.2	0.17	11.2	0.8	1.0	1	0	0	1	1	1	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
Med9	PF07544.8	gi|297526566|ref|YP_003668590.1|	-	0.19	11.4	1.3	0.2	11.4	0.9	1.1	1	0	0	1	1	1	0	RNA	polymerase	II	transcription	mediator	complex	subunit	9
GreA_GreB_N	PF03449.10	gi|297526566|ref|YP_003668590.1|	-	0.23	11.5	3.9	3.5	7.7	0.3	2.0	1	1	1	2	2	2	0	Transcription	elongation	factor,	N-terminal
HSBP1	PF06825.7	gi|297526566|ref|YP_003668590.1|	-	0.37	10.3	5.5	3.5	7.2	3.8	2.0	1	1	0	1	1	1	0	Heat	shock	factor	binding	protein	1
MRF_C1	PF13887.1	gi|297526566|ref|YP_003668590.1|	-	0.79	8.8	4.0	1.9	7.5	0.4	2.3	1	1	2	3	3	3	0	Myelin	gene	regulatory	factor	-C-terminal	domain	1
Osmo_CC	PF08946.5	gi|297526566|ref|YP_003668590.1|	-	1.2	9.1	7.5	1.6	8.8	0.7	2.1	1	1	1	2	2	2	0	Osmosensory	transporter	coiled	coil
YvrJ	PF12841.2	gi|297526566|ref|YP_003668590.1|	-	2	7.8	4.4	2	7.8	0.6	2.0	1	1	1	2	2	2	0	YvrJ	protein	family
PQQ_2	PF13360.1	gi|297526567|ref|YP_003668591.1|	-	0.069	12.5	0.0	0.15	11.5	0.0	1.5	1	0	0	1	1	1	0	PQQ-like	domain
Na_H_Exchanger	PF00999.16	gi|297526569|ref|YP_003668593.1|	-	6e-56	189.6	41.9	7.2e-56	189.3	29.1	1.0	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
PepSY_TM_3	PF13706.1	gi|297526569|ref|YP_003668593.1|	-	5.5	6.4	8.9	4.4	6.8	0.0	3.5	3	0	0	3	3	3	0	PepSY-associated	TM	helix
B5	PF03484.10	gi|297526570|ref|YP_003668594.1|	-	1.3e-21	76.1	2.1	4.9e-17	61.5	0.2	3.1	3	0	0	3	3	3	2	tRNA	synthetase	B5	domain
B3_4	PF03483.12	gi|297526570|ref|YP_003668594.1|	-	2.2e-15	56.5	0.0	4.9e-15	55.4	0.0	1.6	1	0	0	1	1	1	1	B3/4	domain
Peptidase_M28	PF04389.12	gi|297526571|ref|YP_003668595.1|	-	9e-11	41.8	0.0	1.2e-05	25.1	0.0	2.3	2	0	0	2	2	2	2	Peptidase	family	M28
DUF2172	PF09940.4	gi|297526571|ref|YP_003668595.1|	-	1.5e-05	23.6	0.0	9.1e-05	20.9	0.0	2.2	2	1	0	2	2	2	1	Domain	of	unknown	function	(DUF2172)
Isochorismatase	PF00857.15	gi|297526572|ref|YP_003668596.1|	-	1.8e-28	99.6	0.1	3.6e-28	98.6	0.1	1.4	1	1	0	1	1	1	1	Isochorismatase	family
Phosphorylase	PF00343.15	gi|297526573|ref|YP_003668597.1|	-	3.1e-10	38.6	0.2	4.5e-09	34.7	0.0	2.2	2	1	0	2	2	2	1	Carbohydrate	phosphorylase
Glycos_transf_1	PF00534.15	gi|297526573|ref|YP_003668597.1|	-	1.6e-08	34.1	0.0	3.3e-08	33.1	0.0	1.5	1	1	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|297526573|ref|YP_003668597.1|	-	3.9e-05	23.7	0.0	9.8e-05	22.5	0.0	1.7	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
MRF_C1	PF13887.1	gi|297526574|ref|YP_003668598.1|	-	0.018	14.0	0.4	0.038	13.0	0.3	1.5	1	0	0	1	1	1	0	Myelin	gene	regulatory	factor	-C-terminal	domain	1
GatB_Yqey	PF02637.13	gi|297526574|ref|YP_003668598.1|	-	0.021	14.5	0.5	0.027	14.1	0.3	1.4	1	1	0	1	1	1	0	GatB	domain
Cupin_2	PF07883.6	gi|297526575|ref|YP_003668599.1|	-	5.4e-19	67.4	0.6	7.5e-19	67.0	0.4	1.2	1	0	0	1	1	1	1	Cupin	domain
MannoseP_isomer	PF01050.13	gi|297526575|ref|YP_003668599.1|	-	7.9e-08	32.0	0.1	9.4e-08	31.7	0.0	1.1	1	0	0	1	1	1	1	Mannose-6-phosphate	isomerase
AraC_binding	PF02311.14	gi|297526575|ref|YP_003668599.1|	-	3.2e-07	30.1	0.5	5.3e-07	29.4	0.3	1.3	1	0	0	1	1	1	1	AraC-like	ligand	binding	domain
Cupin_7	PF12973.2	gi|297526575|ref|YP_003668599.1|	-	7.2e-06	25.7	0.2	1.2e-05	25.0	0.1	1.4	1	1	0	1	1	1	1	ChrR	Cupin-like	domain
Cupin_1	PF00190.17	gi|297526575|ref|YP_003668599.1|	-	0.0033	16.8	0.0	0.0061	16.0	0.0	1.4	1	1	0	1	1	1	1	Cupin
ARD	PF03079.9	gi|297526575|ref|YP_003668599.1|	-	0.18	11.7	0.6	0.33	10.8	0.4	1.5	1	1	0	1	1	1	0	ARD/ARD'	family
NAD_binding_2	PF03446.10	gi|297526576|ref|YP_003668600.1|	-	3.4e-24	85.5	0.0	4.6e-24	85.1	0.0	1.2	1	0	0	1	1	1	1	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
F420_oxidored	PF03807.12	gi|297526576|ref|YP_003668600.1|	-	1.2e-08	35.3	0.0	1e-07	32.2	0.0	2.3	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
Shikimate_DH	PF01488.15	gi|297526576|ref|YP_003668600.1|	-	1.3e-07	31.7	0.0	2.4e-07	30.9	0.0	1.5	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|297526576|ref|YP_003668600.1|	-	2e-07	30.3	0.0	3.4e-07	29.6	0.0	1.3	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
3HCDH_N	PF02737.13	gi|297526576|ref|YP_003668600.1|	-	4.5e-05	23.1	0.0	0.00024	20.8	0.0	1.9	1	1	1	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_Gly3P_dh_N	PF01210.18	gi|297526576|ref|YP_003668600.1|	-	0.00074	19.2	0.0	0.0015	18.2	0.0	1.6	1	0	0	1	1	1	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
IlvN	PF07991.7	gi|297526576|ref|YP_003668600.1|	-	0.0024	17.2	0.0	0.004	16.5	0.0	1.4	1	0	0	1	1	1	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
ApbA	PF02558.11	gi|297526576|ref|YP_003668600.1|	-	0.0036	16.7	0.0	0.0055	16.1	0.0	1.3	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA
FAD_binding_3	PF01494.14	gi|297526576|ref|YP_003668600.1|	-	0.0089	15.1	0.0	0.012	14.6	0.0	1.1	1	0	0	1	1	1	1	FAD	binding	domain
UDPG_MGDP_dh_N	PF03721.9	gi|297526576|ref|YP_003668600.1|	-	0.012	15.0	0.2	0.026	13.8	0.0	1.6	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
NAD_binding_8	PF13450.1	gi|297526576|ref|YP_003668600.1|	-	0.018	15.0	0.0	0.035	14.1	0.0	1.4	1	0	0	1	1	1	0	NAD(P)-binding	Rossmann-like	domain
NAD_binding_10	PF13460.1	gi|297526576|ref|YP_003668600.1|	-	0.023	14.7	0.0	0.043	13.8	0.0	1.4	1	0	0	1	1	1	0	NADH(P)-binding
NAD_binding_11	PF14833.1	gi|297526576|ref|YP_003668600.1|	-	0.023	14.7	0.0	0.045	13.8	0.0	1.5	1	0	0	1	1	1	0	NAD-binding	of	NADP-dependent	3-hydroxyisobutyrate	dehydrogenase
Epimerase	PF01370.16	gi|297526576|ref|YP_003668600.1|	-	0.027	13.9	0.0	0.048	13.0	0.0	1.4	1	0	0	1	1	1	0	NAD	dependent	epimerase/dehydratase	family
GFO_IDH_MocA	PF01408.17	gi|297526576|ref|YP_003668600.1|	-	0.061	13.8	0.0	0.29	11.6	0.0	1.9	2	0	0	2	2	2	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
Usp	PF00582.21	gi|297526577|ref|YP_003668601.1|	-	2.7e-24	85.9	0.0	3.6e-24	85.5	0.0	1.2	1	0	0	1	1	1	1	Universal	stress	protein	family
Gp_dh_C	PF02800.15	gi|297526578|ref|YP_003668602.1|	-	1.7e-22	79.5	0.1	2.5e-22	79.0	0.1	1.2	1	0	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	C-terminal	domain
Gp_dh_N	PF00044.19	gi|297526578|ref|YP_003668602.1|	-	2.2e-17	63.3	0.2	6.8e-17	61.8	0.1	1.8	1	1	0	1	1	1	1	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
DapB_N	PF01113.15	gi|297526578|ref|YP_003668602.1|	-	1.1e-09	38.3	0.1	2.9e-09	36.9	0.0	1.7	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
GFO_IDH_MocA	PF01408.17	gi|297526578|ref|YP_003668602.1|	-	5.3e-05	23.7	0.0	0.00041	20.8	0.0	2.4	2	1	1	3	3	3	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
Semialdhyde_dh	PF01118.19	gi|297526578|ref|YP_003668602.1|	-	0.00058	20.1	0.0	0.0013	18.9	0.0	1.6	1	0	0	1	1	1	1	Semialdehyde	dehydrogenase,	NAD	binding	domain
NAD_binding_3	PF03447.11	gi|297526578|ref|YP_003668602.1|	-	0.003	17.9	0.1	0.015	15.6	0.1	2.1	1	1	0	1	1	1	1	Homoserine	dehydrogenase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.14	gi|297526578|ref|YP_003668602.1|	-	0.0073	15.4	0.3	0.12	11.5	0.2	2.2	1	1	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
ThiF	PF00899.16	gi|297526578|ref|YP_003668602.1|	-	0.063	13.1	0.2	9.4	6.0	0.0	2.8	2	1	1	3	3	3	0	ThiF	family
CoA_binding	PF02629.14	gi|297526578|ref|YP_003668602.1|	-	0.17	12.4	2.3	0.31	11.5	0.3	2.4	2	1	0	2	2	2	0	CoA	binding	domain
PGK	PF00162.14	gi|297526579|ref|YP_003668603.1|	-	1.5e-109	366.1	0.0	1.7e-109	365.9	0.0	1.0	1	0	0	1	1	1	1	Phosphoglycerate	kinase
DHO_dh	PF01180.16	gi|297526580|ref|YP_003668604.1|	-	2.8e-36	125.0	0.1	1.5e-30	106.1	0.0	2.3	2	0	0	2	2	2	2	Dihydroorotate	dehydrogenase
Fer4	PF00037.22	gi|297526580|ref|YP_003668604.1|	-	2.2e-13	49.2	18.1	1.2e-07	31.0	0.6	2.7	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|297526580|ref|YP_003668604.1|	-	3.1e-12	46.1	6.8	3.1e-12	46.1	4.7	1.6	2	0	0	2	2	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|297526580|ref|YP_003668604.1|	-	5.3e-12	45.9	9.6	1.2e-11	44.8	6.6	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|297526580|ref|YP_003668604.1|	-	5.7e-11	41.7	16.9	7.5e-07	28.7	1.0	2.7	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|297526580|ref|YP_003668604.1|	-	4.3e-10	39.2	17.6	9.7e-08	31.7	6.7	2.5	2	1	1	3	3	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|297526580|ref|YP_003668604.1|	-	2.2e-09	37.4	9.5	4.4e-09	36.4	6.6	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|297526580|ref|YP_003668604.1|	-	6.5e-08	32.0	17.3	1.1e-05	25.0	1.0	2.8	3	0	0	3	3	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|297526580|ref|YP_003668604.1|	-	4.2e-07	30.6	3.3	0.0012	19.5	0.4	2.6	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_8	PF13183.1	gi|297526580|ref|YP_003668604.1|	-	2.6e-06	27.3	9.1	4.1e-06	26.7	5.5	1.9	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|297526580|ref|YP_003668604.1|	-	2e-05	24.9	6.4	0.043	14.2	0.6	2.8	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|297526580|ref|YP_003668604.1|	-	2.8e-05	24.5	6.8	0.058	13.9	0.6	2.6	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
NMO	PF03060.10	gi|297526580|ref|YP_003668604.1|	-	7.8e-05	21.9	3.3	0.00013	21.2	1.9	1.5	1	1	0	1	1	1	1	Nitronate	monooxygenase
FMN_dh	PF01070.13	gi|297526580|ref|YP_003668604.1|	-	0.00013	20.9	0.3	0.00049	19.0	0.1	2.0	2	1	0	2	2	2	1	FMN-dependent	dehydrogenase
Fer4_17	PF13534.1	gi|297526580|ref|YP_003668604.1|	-	0.00033	20.9	10.9	0.0072	16.6	7.5	2.4	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
His_biosynth	PF00977.16	gi|297526580|ref|YP_003668604.1|	-	0.00037	19.8	0.0	0.005	16.1	0.0	2.6	2	1	0	2	2	2	1	Histidine	biosynthesis	protein
Fer4_13	PF13370.1	gi|297526580|ref|YP_003668604.1|	-	0.0015	18.8	8.4	0.19	12.1	0.4	2.6	2	0	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_3	PF12798.2	gi|297526580|ref|YP_003668604.1|	-	0.006	17.0	19.7	0.057	14.0	3.3	3.1	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|297526580|ref|YP_003668604.1|	-	0.0066	16.6	17.9	0.035	14.4	1.9	2.6	3	0	0	3	3	2	2	4Fe-4S	binding	domain
IMPDH	PF00478.20	gi|297526580|ref|YP_003668604.1|	-	0.013	14.3	0.8	0.013	14.3	0.6	1.7	2	0	0	2	2	2	0	IMP	dehydrogenase	/	GMP	reductase	domain
DUF561	PF04481.7	gi|297526580|ref|YP_003668604.1|	-	0.11	11.4	0.6	0.39	9.6	0.4	2.0	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF561)
Cren7	PF11520.3	gi|297526582|ref|YP_003668606.1|	-	3.7e-32	109.7	2.7	4.1e-32	109.6	1.9	1.0	1	0	0	1	1	1	1	Chromatin	protein	Cren7
DUF4585	PF15232.1	gi|297526582|ref|YP_003668606.1|	-	0.016	15.0	0.1	0.034	14.0	0.0	1.6	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4585)
Amidohydro_1	PF01979.15	gi|297526583|ref|YP_003668607.1|	-	5.3e-46	157.7	0.1	6.5e-46	157.5	0.1	1.1	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_3	PF07969.6	gi|297526583|ref|YP_003668607.1|	-	2.2e-13	50.2	0.1	2.1e-10	40.4	0.0	2.5	1	1	0	2	2	2	2	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|297526583|ref|YP_003668607.1|	-	1.7e-11	43.7	0.0	6.5e-11	41.8	0.0	2.1	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_4	PF13147.1	gi|297526583|ref|YP_003668607.1|	-	1.9e-09	37.9	0.0	2.6e-07	30.9	0.0	2.5	2	1	1	3	3	3	1	Amidohydrolase
TatD_DNase	PF01026.16	gi|297526583|ref|YP_003668607.1|	-	0.098	11.8	0.2	0.7	9.0	0.1	2.1	1	1	0	1	1	1	0	TatD	related	DNase
AA_kinase	PF00696.23	gi|297526584|ref|YP_003668608.1|	-	1.2e-33	116.6	0.0	1.4e-33	116.4	0.0	1.0	1	0	0	1	1	1	1	Amino	acid	kinase	family
Radical_SAM	PF04055.16	gi|297526585|ref|YP_003668609.1|	-	1.1e-19	71.2	0.0	2e-19	70.3	0.0	1.3	1	0	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|297526585|ref|YP_003668609.1|	-	8.6e-12	45.1	0.0	1.5e-11	44.3	0.0	1.3	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|297526585|ref|YP_003668609.1|	-	1.9e-10	40.9	0.0	3e-10	40.3	0.0	1.2	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
HAD_2	PF13419.1	gi|297526585|ref|YP_003668609.1|	-	0.054	13.7	0.0	8.2	6.6	0.0	2.1	1	1	1	2	2	2	0	Haloacid	dehalogenase-like	hydrolase
Acetyltransf_CG	PF14542.1	gi|297526586|ref|YP_003668610.1|	-	2.7e-20	72.0	0.0	4.4e-20	71.3	0.0	1.3	1	0	0	1	1	1	1	GCN5-related	N-acetyl-transferase
Acetyltransf_1	PF00583.19	gi|297526586|ref|YP_003668610.1|	-	2.8e-06	27.2	0.0	4.2e-06	26.6	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|297526586|ref|YP_003668610.1|	-	7e-05	22.9	0.1	9.4e-05	22.4	0.0	1.4	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|297526586|ref|YP_003668610.1|	-	0.00022	21.0	0.2	0.0007	19.4	0.0	1.8	1	1	1	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|297526586|ref|YP_003668610.1|	-	0.0018	18.3	0.0	0.0032	17.5	0.0	1.4	2	0	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_4	PF13420.1	gi|297526586|ref|YP_003668610.1|	-	0.045	13.7	0.7	6.6	6.6	0.0	2.2	2	0	0	2	2	2	0	Acetyltransferase	(GNAT)	domain
Lactamase_B_2	PF12706.2	gi|297526587|ref|YP_003668611.1|	-	2e-07	30.7	0.3	2.8e-07	30.2	0.2	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|297526587|ref|YP_003668611.1|	-	1.5e-06	27.9	0.0	1.8e-05	24.5	0.0	2.0	1	1	1	2	2	2	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|297526587|ref|YP_003668611.1|	-	8.4e-06	25.5	0.4	1.8e-05	24.5	0.3	1.5	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Ribosomal_L10	PF00466.15	gi|297526587|ref|YP_003668611.1|	-	0.097	12.6	1.9	0.18	11.7	0.2	2.3	3	0	0	3	3	3	0	Ribosomal	protein	L10
DHH	PF01368.15	gi|297526587|ref|YP_003668611.1|	-	0.1	12.2	0.4	1.6	8.3	0.0	2.3	2	0	0	2	2	2	0	DHH	family
Abi_2	PF07751.6	gi|297526587|ref|YP_003668611.1|	-	0.13	12.4	2.9	1.4	9.0	0.0	2.2	2	0	0	2	2	2	0	Abi-like	protein
Arc_PepC	PF06819.6	gi|297526587|ref|YP_003668611.1|	-	0.43	10.5	4.6	0.22	11.4	0.5	2.4	3	0	0	3	3	3	0	Archaeal	Peptidase	A24	C-terminal	Domain
AHH	PF14412.1	gi|297526587|ref|YP_003668611.1|	-	2.1	8.4	8.8	0.42	10.6	1.6	2.5	2	2	0	2	2	2	0	A	nuclease	family	of	the	HNH/ENDO	VII	superfamily	with	conserved	AHH
PIN	PF01850.16	gi|297526588|ref|YP_003668612.1|	-	2.4e-12	47.2	0.1	3.9e-12	46.5	0.1	1.3	1	1	0	1	1	1	1	PIN	domain
Terminase_4	PF05119.7	gi|297526588|ref|YP_003668612.1|	-	0.0031	17.6	0.0	0.004	17.2	0.0	1.1	1	0	0	1	1	1	1	Phage	terminase,	small	subunit
ThylakoidFormat	PF11264.3	gi|297526588|ref|YP_003668612.1|	-	0.13	11.8	0.0	0.17	11.5	0.0	1.1	1	0	0	1	1	1	0	Thylakoid	formation	protein
OTCace_N	PF02729.16	gi|297526591|ref|YP_003668615.1|	-	1.1e-41	141.7	0.0	1.6e-41	141.2	0.0	1.2	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
OTCace	PF00185.19	gi|297526591|ref|YP_003668615.1|	-	1.2e-36	125.9	0.0	1.8e-36	125.3	0.0	1.2	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
RuvA_C	PF07499.8	gi|297526591|ref|YP_003668615.1|	-	0.053	13.6	0.3	0.14	12.3	0.2	1.7	1	0	0	1	1	1	0	RuvA,	C-terminal	domain
Baculo_PEP_C	PF04513.7	gi|297526593|ref|YP_003668617.1|	-	0.0001	22.1	8.9	0.017	14.9	0.3	3.4	1	1	2	3	3	3	2	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
DUF948	PF06103.6	gi|297526593|ref|YP_003668617.1|	-	0.025	14.4	5.6	1.4	8.7	0.0	3.8	1	1	2	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF948)
FokI_C	PF02980.11	gi|297526593|ref|YP_003668617.1|	-	0.05	13.2	1.5	0.56	9.8	0.3	2.7	1	1	0	2	2	2	0	Restriction	endonuclease	FokI,	catalytic	domain
TBPIP	PF07106.8	gi|297526593|ref|YP_003668617.1|	-	0.091	12.2	19.4	0.51	9.8	5.8	2.9	1	1	1	2	2	2	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
Hemerythrin	PF01814.18	gi|297526593|ref|YP_003668617.1|	-	0.12	12.4	5.0	3.7	7.7	1.0	3.2	2	1	2	4	4	4	0	Hemerythrin	HHE	cation	binding	domain
Filament	PF00038.16	gi|297526593|ref|YP_003668617.1|	-	0.13	11.6	22.2	0.047	13.1	5.0	2.8	2	1	1	3	3	3	0	Intermediate	filament	protein
Apolipoprotein	PF01442.13	gi|297526593|ref|YP_003668617.1|	-	0.56	9.6	11.7	0.47	9.9	4.9	2.0	1	1	1	2	2	2	0	Apolipoprotein	A1/A4/E	domain
FliD_C	PF07195.7	gi|297526593|ref|YP_003668617.1|	-	0.57	9.4	9.7	10	5.3	6.1	2.8	1	1	0	1	1	1	0	Flagellar	hook-associated	protein	2	C-terminus
DUF3135	PF11333.3	gi|297526593|ref|YP_003668617.1|	-	0.58	10.3	6.6	4.1	7.6	0.9	2.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3135)
FlxA	PF14282.1	gi|297526593|ref|YP_003668617.1|	-	0.91	9.4	14.6	1	9.3	1.0	3.1	2	1	2	4	4	4	0	FlxA-like	protein
Syntaxin-6_N	PF09177.6	gi|297526593|ref|YP_003668617.1|	-	1.8	9.0	14.9	0.26	11.6	1.1	3.6	2	1	2	4	4	4	0	Syntaxin	6,	N-terminal
ING	PF12998.2	gi|297526593|ref|YP_003668617.1|	-	4.3	7.6	23.2	2.2	8.6	0.2	3.7	2	1	2	4	4	4	0	Inhibitor	of	growth	proteins	N-terminal	histone-binding
Prefoldin_2	PF01920.15	gi|297526593|ref|YP_003668617.1|	-	4.9	6.9	16.5	30	4.4	0.6	4.1	1	1	1	2	2	2	0	Prefoldin	subunit
Taeniidae_ag	PF05596.6	gi|297526593|ref|YP_003668617.1|	-	9.9	6.0	11.4	17	5.2	1.5	3.9	3	1	1	4	4	4	0	Taeniidae	antigen
MFS_1	PF07690.11	gi|297526594|ref|YP_003668618.1|	-	9.1e-30	103.5	38.9	9.5e-17	60.7	11.4	2.8	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Fijivirus_P9-2	PF06837.6	gi|297526594|ref|YP_003668618.1|	-	1.1	8.3	9.5	3	6.9	6.6	1.7	1	0	0	1	1	1	0	Fijivirus	P9-2	protein
OTCace	PF00185.19	gi|297526595|ref|YP_003668619.1|	-	7.4e-53	178.6	0.0	1.2e-52	177.9	0.0	1.4	1	0	0	1	1	1	1	Aspartate/ornithine	carbamoyltransferase,	Asp/Orn	binding	domain
OTCace_N	PF02729.16	gi|297526595|ref|YP_003668619.1|	-	6.7e-50	168.4	0.0	1.3e-49	167.5	0.0	1.4	2	0	0	2	2	2	1	Aspartate/ornithine	carbamoyltransferase,	carbamoyl-P	binding	domain
STT3	PF02516.9	gi|297526596|ref|YP_003668620.1|	-	5e-21	75.2	51.8	1.2e-20	73.9	35.9	1.7	1	1	0	1	1	1	1	Oligosaccharyl	transferase	STT3	subunit
LOH1CR12	PF10158.4	gi|297526597|ref|YP_003668621.1|	-	0.00012	21.8	0.5	0.00028	20.6	0.3	1.6	1	1	1	2	2	2	1	Tumour	suppressor	protein
Med8	PF10232.4	gi|297526597|ref|YP_003668621.1|	-	0.098	12.1	0.5	0.17	11.3	0.3	1.6	1	1	0	1	1	1	0	Mediator	of	RNA	polymerase	II	transcription	complex	subunit	8
DASH_Dad3	PF08656.5	gi|297526597|ref|YP_003668621.1|	-	0.49	10.1	2.6	1.3	8.7	0.6	2.8	1	1	0	2	2	2	0	DASH	complex	subunit	Dad3
M	PF02370.11	gi|297526597|ref|YP_003668621.1|	-	4.1	8.0	5.1	8.6	7.1	0.1	3.4	3	0	0	3	3	3	0	M	protein	repeat
ParA	PF10609.4	gi|297526599|ref|YP_003668623.1|	-	1.5e-28	98.5	0.2	2.5e-28	97.7	0.1	1.4	1	0	0	1	1	1	1	ParA/MinD	ATPase	like
CbiA	PF01656.18	gi|297526599|ref|YP_003668623.1|	-	4.3e-19	68.6	0.1	7.3e-19	67.9	0.1	1.3	1	0	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ArsA_ATPase	PF02374.10	gi|297526599|ref|YP_003668623.1|	-	5.8e-07	28.8	0.4	4.6e-06	25.8	0.1	2.1	2	0	0	2	2	2	1	Anion-transporting	ATPase
AAA_31	PF13614.1	gi|297526599|ref|YP_003668623.1|	-	2.7e-06	27.4	0.1	7.3e-05	22.7	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
AAA_26	PF13500.1	gi|297526599|ref|YP_003668623.1|	-	3.8e-06	26.6	1.0	0.026	14.1	0.1	2.2	2	0	0	2	2	2	2	AAA	domain
Fer4_NifH	PF00142.13	gi|297526599|ref|YP_003668623.1|	-	9.6e-06	24.9	0.1	0.036	13.2	0.0	2.4	2	1	0	2	2	2	2	4Fe-4S	iron	sulfur	cluster	binding	proteins,	NifH/frxC	family
MipZ	PF09140.6	gi|297526599|ref|YP_003668623.1|	-	8.4e-05	21.7	0.0	0.00019	20.6	0.0	1.6	1	1	0	1	1	1	1	ATPase	MipZ
AAA_10	PF12846.2	gi|297526599|ref|YP_003668623.1|	-	0.0029	17.1	0.6	0.0079	15.6	0.1	1.9	2	0	0	2	2	2	1	AAA-like	domain
AAA_30	PF13604.1	gi|297526599|ref|YP_003668623.1|	-	0.005	16.4	0.0	0.0099	15.4	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.12	gi|297526599|ref|YP_003668623.1|	-	0.0055	16.1	0.0	0.016	14.6	0.0	1.7	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
VirC1	PF07015.6	gi|297526599|ref|YP_003668623.1|	-	0.0091	15.0	0.1	0.017	14.2	0.0	1.4	1	0	0	1	1	1	1	VirC1	protein
AAA_19	PF13245.1	gi|297526599|ref|YP_003668623.1|	-	0.011	15.5	0.1	0.3	10.8	0.0	2.5	2	0	0	2	2	2	0	Part	of	AAA	domain
PhoH	PF02562.11	gi|297526599|ref|YP_003668623.1|	-	0.05	12.8	0.1	0.19	10.9	0.0	1.8	2	0	0	2	2	2	0	PhoH-like	protein
NB-ARC	PF00931.17	gi|297526599|ref|YP_003668623.1|	-	0.054	12.3	0.2	0.088	11.6	0.1	1.3	1	0	0	1	1	1	0	NB-ARC	domain
AAA_25	PF13481.1	gi|297526599|ref|YP_003668623.1|	-	0.061	12.7	0.1	0.11	11.9	0.1	1.3	1	0	0	1	1	1	0	AAA	domain
PIF1	PF05970.9	gi|297526599|ref|YP_003668623.1|	-	0.063	12.2	0.0	0.088	11.7	0.0	1.2	1	0	0	1	1	1	0	PIF1-like	helicase
ResIII	PF04851.10	gi|297526599|ref|YP_003668623.1|	-	0.078	12.8	0.0	0.49	10.2	0.0	2.0	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
APS_kinase	PF01583.15	gi|297526599|ref|YP_003668623.1|	-	0.084	12.5	0.1	0.14	11.7	0.0	1.3	1	0	0	1	1	1	0	Adenylylsulphate	kinase
SRP54	PF00448.17	gi|297526599|ref|YP_003668623.1|	-	0.1	12.0	0.0	0.19	11.1	0.0	1.4	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
YhjQ	PF06564.7	gi|297526599|ref|YP_003668623.1|	-	0.11	11.8	0.3	0.81	9.0	0.1	2.2	3	0	0	3	3	3	0	YhjQ	protein
Zeta_toxin	PF06414.7	gi|297526599|ref|YP_003668623.1|	-	0.13	11.3	0.0	0.2	10.7	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
AAA_22	PF13401.1	gi|297526599|ref|YP_003668623.1|	-	0.14	12.3	0.1	0.57	10.3	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
MgtE	PF01769.11	gi|297526600|ref|YP_003668624.1|	-	2.8e-18	66.4	36.1	1.1e-11	45.1	3.0	4.0	2	2	1	4	4	4	2	Divalent	cation	transporter
DUF4027	PF13219.1	gi|297526600|ref|YP_003668624.1|	-	0.59	9.6	5.3	5.4	6.5	0.9	3.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4027)
GHMP_kinases_N	PF00288.21	gi|297526601|ref|YP_003668625.1|	-	8.2e-21	73.8	0.1	1.8e-20	72.7	0.1	1.6	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
GHMP_kinases_C	PF08544.8	gi|297526601|ref|YP_003668625.1|	-	1e-09	38.4	0.1	3.3e-09	36.8	0.0	1.8	2	0	0	2	2	2	1	GHMP	kinases	C	terminal
TA0956	PF11513.3	gi|297526601|ref|YP_003668625.1|	-	0.022	14.8	0.3	0.15	12.0	0.0	2.3	3	0	0	3	3	3	0	Thermoplasma	acidophilum	protein	TA0956
Lipoprotein_8	PF02030.10	gi|297526602|ref|YP_003668626.1|	-	0.028	12.9	0.0	0.028	12.9	0.0	1.1	1	0	0	1	1	1	0	Hypothetical	lipoprotein	(MG045	family)
DUF43	PF01861.11	gi|297526602|ref|YP_003668626.1|	-	0.14	11.0	0.9	0.18	10.7	0.6	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	DUF43
Amidohydro_1	PF01979.15	gi|297526603|ref|YP_003668627.1|	-	2e-19	70.4	0.0	2.7e-19	70.0	0.0	1.2	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|297526603|ref|YP_003668627.1|	-	1.1e-06	28.2	0.0	3.7e-06	26.6	0.0	2.0	1	0	0	1	1	1	1	Amidohydrolase
HisK_N	PF09385.5	gi|297526604|ref|YP_003668628.1|	-	0.069	12.7	0.1	0.083	12.5	0.1	1.1	1	0	0	1	1	1	0	Histidine	kinase	N	terminal
DUF2863	PF11062.3	gi|297526604|ref|YP_003668628.1|	-	0.087	10.8	0.0	0.095	10.7	0.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2863)
CN_hydrolase	PF00795.17	gi|297526605|ref|YP_003668629.1|	-	6e-17	61.6	0.0	8.6e-17	61.0	0.0	1.2	1	0	0	1	1	1	1	Carbon-nitrogen	hydrolase
DUF2258	PF10015.4	gi|297526606|ref|YP_003668630.1|	-	1.7e-26	91.7	3.9	3.1e-26	90.9	2.7	1.4	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2258)
DUF4145	PF13643.1	gi|297526606|ref|YP_003668630.1|	-	0.077	12.8	1.2	0.099	12.5	0.3	1.6	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4145)
XisI	PF08869.6	gi|297526606|ref|YP_003668630.1|	-	0.28	11.3	2.6	0.35	11.0	1.8	1.1	1	0	0	1	1	1	0	XisI	protein
SPO22	PF08631.5	gi|297526608|ref|YP_003668632.1|	-	0.041	12.9	0.6	0.057	12.5	0.4	1.2	1	0	0	1	1	1	0	Meiosis	protein	SPO22/ZIP4	like
DUF4234	PF14018.1	gi|297526608|ref|YP_003668632.1|	-	0.05	13.3	0.1	0.05	13.3	0.1	2.9	3	1	0	3	3	3	0	Domain	of	unknown	function	(DUF4234)
MARVEL	PF01284.18	gi|297526608|ref|YP_003668632.1|	-	0.98	9.2	4.5	0.61	9.8	0.1	2.4	3	0	0	3	3	3	0	Membrane-associating	domain
DUF898	PF05987.8	gi|297526608|ref|YP_003668632.1|	-	1.8	7.3	13.8	0.58	8.9	0.1	2.9	3	0	0	3	3	3	0	Bacterial	protein	of	unknown	function	(DUF898)
PBP_like	PF12727.2	gi|297526609|ref|YP_003668633.1|	-	4e-60	202.0	0.0	6.7e-60	201.3	0.0	1.3	1	0	0	1	1	1	1	PBP	superfamily	domain
MoeA_N	PF03453.12	gi|297526609|ref|YP_003668633.1|	-	9.3e-51	171.3	0.1	2e-50	170.3	0.0	1.6	2	0	0	2	2	2	1	MoeA	N-terminal	region	(domain	I	and	II)
MoCF_biosynth	PF00994.19	gi|297526609|ref|YP_003668633.1|	-	2.9e-28	98.0	0.0	7.4e-28	96.7	0.0	1.7	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
MoeA_C	PF03454.10	gi|297526609|ref|YP_003668633.1|	-	3.2e-10	39.8	0.0	8.2e-10	38.5	0.0	1.8	1	0	0	1	1	1	1	MoeA	C-terminal	region	(domain	IV)
SBP_bac_11	PF13531.1	gi|297526609|ref|YP_003668633.1|	-	7.4e-08	32.3	0.0	1.5e-07	31.2	0.0	1.4	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
Phosphonate-bd	PF12974.2	gi|297526609|ref|YP_003668633.1|	-	0.0038	16.6	0.0	0.0062	15.9	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter,	phosphonate,	periplasmic	substrate-binding	protein
DEAD	PF00270.24	gi|297526610|ref|YP_003668634.1|	-	1.3e-27	96.4	0.0	2.5e-27	95.4	0.0	1.5	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
HHH_5	PF14520.1	gi|297526610|ref|YP_003668634.1|	-	7e-13	48.5	0.0	1.2e-11	44.6	0.0	2.9	3	0	0	3	3	3	1	Helix-hairpin-helix	domain
Helicase_C	PF00271.26	gi|297526610|ref|YP_003668634.1|	-	5.2e-07	29.4	0.1	5.1e-06	26.2	0.1	2.5	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|297526610|ref|YP_003668634.1|	-	5.9e-06	26.2	0.0	2e-05	24.5	0.0	1.9	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
DNA_pol_lambd_f	PF10391.4	gi|297526610|ref|YP_003668634.1|	-	0.00024	20.5	0.0	0.0046	16.4	0.0	2.9	2	0	0	2	2	2	1	Fingers	domain	of	DNA	polymerase	lambda
T2SE	PF00437.15	gi|297526610|ref|YP_003668634.1|	-	0.13	11.0	0.0	0.25	10.1	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
ABC_tran	PF00005.22	gi|297526611|ref|YP_003668635.1|	-	1.2e-29	103.3	0.0	2.9e-29	102.1	0.0	1.6	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|297526611|ref|YP_003668635.1|	-	5.9e-13	49.4	3.3	1.9e-10	41.1	0.5	2.6	2	1	0	2	2	2	1	AAA	domain
SMC_N	PF02463.14	gi|297526611|ref|YP_003668635.1|	-	4.3e-07	29.4	0.1	0.00016	21.0	0.0	2.3	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|297526611|ref|YP_003668635.1|	-	1.8e-06	27.3	3.8	4.6e-05	22.6	0.0	2.7	3	0	0	3	3	3	1	AAA	ATPase	domain
AAA_16	PF13191.1	gi|297526611|ref|YP_003668635.1|	-	0.00024	21.1	0.1	0.00095	19.1	0.0	1.9	2	0	0	2	2	2	1	AAA	ATPase	domain
GvpG	PF05120.7	gi|297526611|ref|YP_003668635.1|	-	0.00063	19.4	1.8	0.0016	18.2	1.3	1.6	1	0	0	1	1	1	1	Gas	vesicle	protein	G
DUF258	PF03193.11	gi|297526611|ref|YP_003668635.1|	-	0.0011	18.1	0.2	0.0023	17.1	0.1	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_29	PF13555.1	gi|297526611|ref|YP_003668635.1|	-	0.0013	18.2	0.2	0.0025	17.3	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_25	PF13481.1	gi|297526611|ref|YP_003668635.1|	-	0.0048	16.3	0.4	0.082	12.2	0.1	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_23	PF13476.1	gi|297526611|ref|YP_003668635.1|	-	0.0059	16.9	2.8	0.19	12.0	0.2	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_18	PF13238.1	gi|297526611|ref|YP_003668635.1|	-	0.0097	16.2	2.5	0.082	13.2	0.1	2.8	2	1	1	3	3	3	1	AAA	domain
TAFH	PF07531.9	gi|297526611|ref|YP_003668635.1|	-	0.012	15.2	0.2	0.022	14.3	0.1	1.4	1	0	0	1	1	1	0	NHR1	homology	to	TAF
AAA_22	PF13401.1	gi|297526611|ref|YP_003668635.1|	-	0.014	15.5	2.6	0.19	11.8	0.2	2.9	3	0	0	3	3	3	0	AAA	domain
DUF1707	PF08044.6	gi|297526611|ref|YP_003668635.1|	-	0.015	15.0	0.0	0.05	13.3	0.0	1.9	2	0	0	2	2	1	0	Domain	of	unknown	function	(DUF1707)
AAA_13	PF13166.1	gi|297526611|ref|YP_003668635.1|	-	0.017	13.5	3.2	5.4	5.3	0.0	3.0	3	0	0	3	3	3	0	AAA	domain
cobW	PF02492.14	gi|297526611|ref|YP_003668635.1|	-	0.022	14.1	0.1	0.044	13.2	0.1	1.5	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_17	PF13207.1	gi|297526611|ref|YP_003668635.1|	-	0.024	15.4	1.2	0.059	14.1	0.1	2.2	2	1	1	3	3	2	0	AAA	domain
MobB	PF03205.9	gi|297526611|ref|YP_003668635.1|	-	0.026	14.2	1.4	0.24	11.1	0.1	2.5	2	1	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_19	PF13245.1	gi|297526611|ref|YP_003668635.1|	-	0.029	14.1	0.3	0.088	12.5	0.2	1.8	1	0	0	1	1	1	0	Part	of	AAA	domain
SHOCT	PF09851.4	gi|297526611|ref|YP_003668635.1|	-	0.051	13.0	0.9	0.13	11.8	0.6	1.7	1	0	0	1	1	1	0	Short	C-terminal	domain
AAA_10	PF12846.2	gi|297526611|ref|YP_003668635.1|	-	0.054	12.9	0.3	0.13	11.6	0.2	1.6	1	0	0	1	1	1	0	AAA-like	domain
T2SE	PF00437.15	gi|297526611|ref|YP_003668635.1|	-	0.068	12.0	0.6	0.17	10.7	0.1	1.8	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
CHAD	PF05235.9	gi|297526611|ref|YP_003668635.1|	-	0.095	12.2	0.1	0.13	11.8	0.0	1.3	1	0	0	1	1	1	0	CHAD	domain
AAA_28	PF13521.1	gi|297526611|ref|YP_003668635.1|	-	0.1	12.5	0.7	1.5	8.7	0.6	2.3	2	0	0	2	2	2	0	AAA	domain
SbcCD_C	PF13558.1	gi|297526611|ref|YP_003668635.1|	-	0.15	12.0	0.2	2.1	8.2	0.1	2.2	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
NACHT	PF05729.7	gi|297526611|ref|YP_003668635.1|	-	0.17	11.5	0.3	0.32	10.6	0.2	1.4	1	0	0	1	1	1	0	NACHT	domain
FtsX	PF02687.16	gi|297526612|ref|YP_003668636.1|	-	5.1e-09	35.9	42.7	9.1e-07	28.6	13.2	4.8	4	1	2	6	6	6	2	FtsX-like	permease	family
TM_helix	PF05552.7	gi|297526613|ref|YP_003668637.1|	-	3.3e-13	49.0	18.1	7.8e-09	35.0	1.5	6.5	5	1	1	6	6	6	3	Conserved	TM	helix
Wzz	PF02706.10	gi|297526613|ref|YP_003668637.1|	-	2.7	7.8	5.9	16	5.3	0.2	3.2	2	0	0	2	2	2	0	Chain	length	determinant	protein
Radical_SAM	PF04055.16	gi|297526614|ref|YP_003668638.1|	-	6e-20	72.0	0.1	5.1e-19	69.0	0.0	2.2	2	0	0	2	2	2	1	Radical	SAM	superfamily
AsnC_trans_reg	PF01037.16	gi|297526615|ref|YP_003668639.1|	-	5.6e-10	38.7	0.9	6.4e-10	38.5	0.6	1.1	1	0	0	1	1	1	1	AsnC	family
ACT_4	PF13291.1	gi|297526615|ref|YP_003668639.1|	-	0.0029	17.9	0.9	1.2	9.5	0.0	2.2	2	0	0	2	2	2	2	ACT	domain
NapD	PF03927.8	gi|297526615|ref|YP_003668639.1|	-	0.0033	17.2	0.2	0.0049	16.6	0.1	1.3	1	0	0	1	1	1	1	NapD	protein
GYD	PF08734.6	gi|297526615|ref|YP_003668639.1|	-	0.052	13.2	0.1	0.057	13.1	0.0	1.2	1	0	0	1	1	1	0	GYD	domain
Pox_Ag35	PF03286.9	gi|297526615|ref|YP_003668639.1|	-	0.096	12.1	0.4	0.1	12.0	0.3	1.2	1	0	0	1	1	1	0	Pox	virus	Ag35	surface	protein
Orn_Arg_deC_N	PF02784.11	gi|297526616|ref|YP_003668640.1|	-	6.5e-30	104.1	0.0	9.5e-30	103.5	0.0	1.2	1	0	0	1	1	1	1	Pyridoxal-dependent	decarboxylase,	pyridoxal	binding	domain
Orn_DAP_Arg_deC	PF00278.17	gi|297526616|ref|YP_003668640.1|	-	6.5e-18	64.5	0.0	8.2e-17	60.9	0.0	2.2	1	1	0	1	1	1	1	Pyridoxal-dependent	decarboxylase,	C-terminal	sheet	domain
DUF357	PF04010.8	gi|297526617|ref|YP_003668641.1|	-	2.1e-22	78.5	3.1	3.7e-22	77.8	2.2	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF357)
CTP_transf_2	PF01467.21	gi|297526617|ref|YP_003668641.1|	-	1.2e-08	35.1	0.1	2e-08	34.4	0.0	1.4	1	1	0	1	1	1	1	Cytidylyltransferase
FMN_red	PF03358.10	gi|297526618|ref|YP_003668642.1|	-	8.2e-25	87.0	0.0	1.3e-24	86.4	0.0	1.3	1	0	0	1	1	1	1	NADPH-dependent	FMN	reductase
Flavodoxin_2	PF02525.12	gi|297526618|ref|YP_003668642.1|	-	4.6e-12	45.8	0.0	9e-12	44.9	0.0	1.5	1	1	0	1	1	1	1	Flavodoxin-like	fold
NTP_transferase	PF00483.18	gi|297526619|ref|YP_003668643.1|	-	9.9e-51	172.4	0.0	1.6e-50	171.7	0.0	1.3	1	0	0	1	1	1	1	Nucleotidyl	transferase
PGM_PMM_I	PF02878.11	gi|297526619|ref|YP_003668643.1|	-	4.3e-22	78.0	0.4	1e-20	73.5	0.0	2.7	3	0	0	3	3	3	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
Hexapep	PF00132.19	gi|297526619|ref|YP_003668643.1|	-	1.5e-14	52.7	18.0	7e-08	31.6	1.5	4.5	3	1	1	4	4	4	2	Bacterial	transferase	hexapeptide	(six	repeats)
NTP_transf_3	PF12804.2	gi|297526619|ref|YP_003668643.1|	-	6e-11	42.6	0.0	1.3e-10	41.6	0.0	1.6	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
PGM_PMM_III	PF02880.11	gi|297526619|ref|YP_003668643.1|	-	2.6e-10	40.3	0.0	5.8e-10	39.2	0.0	1.6	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_II	PF02879.11	gi|297526619|ref|YP_003668643.1|	-	4.3e-10	39.8	0.0	1e-09	38.6	0.0	1.6	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
Hexapep_2	PF14602.1	gi|297526619|ref|YP_003668643.1|	-	0.0005	19.5	10.4	0.00054	19.4	0.3	3.5	3	1	1	4	4	4	1	Hexapeptide	repeat	of	succinyl-transferase
PALP	PF00291.20	gi|297526619|ref|YP_003668643.1|	-	0.023	13.9	0.0	0.039	13.1	0.0	1.2	1	0	0	1	1	1	0	Pyridoxal-phosphate	dependent	enzyme
IspD	PF01128.14	gi|297526619|ref|YP_003668643.1|	-	0.028	13.9	0.0	0.061	12.8	0.0	1.5	1	0	0	1	1	1	0	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
PGM_PMM_IV	PF00408.15	gi|297526619|ref|YP_003668643.1|	-	0.093	12.7	0.0	0.24	11.4	0.0	1.7	1	0	0	1	1	1	0	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
PBP	PF01161.15	gi|297526620|ref|YP_003668644.1|	-	1.9e-36	125.1	0.0	2.3e-36	124.8	0.0	1.1	1	0	0	1	1	1	1	Phosphatidylethanolamine-binding	protein
HAD_2	PF13419.1	gi|297526621|ref|YP_003668645.1|	-	1.2e-19	71.2	0.0	1.5e-19	70.9	0.0	1.2	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|297526621|ref|YP_003668645.1|	-	3.5e-08	33.0	0.0	7.3e-08	32.0	0.0	1.5	1	0	0	1	1	1	1	HAD-hyrolase-like
Hydrolase	PF00702.21	gi|297526621|ref|YP_003668645.1|	-	0.00014	22.3	0.0	0.00015	22.2	0.0	1.1	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Nucleoporin_C	PF03177.9	gi|297526621|ref|YP_003668645.1|	-	0.13	10.7	0.4	0.17	10.3	0.2	1.1	1	0	0	1	1	1	0	Non-repetitive/WGA-negative	nucleoporin	C-terminal
rve	PF00665.21	gi|297526623|ref|YP_003668647.1|	-	0.099	12.7	0.0	0.17	12.0	0.0	1.3	1	0	0	1	1	1	0	Integrase	core	domain
KASH	PF10541.4	gi|297526623|ref|YP_003668647.1|	-	8.1	6.3	7.7	4.7	7.1	3.6	1.8	2	0	0	2	2	2	0	Nuclear	envelope	localisation	domain
ABC_tran	PF00005.22	gi|297526625|ref|YP_003668649.1|	-	4.1e-18	65.9	0.0	6.8e-18	65.2	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297526625|ref|YP_003668649.1|	-	5.8e-07	29.7	4.5	0.0023	17.9	0.1	2.4	2	1	0	3	3	3	2	AAA	domain
AAA_23	PF13476.1	gi|297526625|ref|YP_003668649.1|	-	1.8e-06	28.4	0.0	2.9e-06	27.7	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|297526625|ref|YP_003668649.1|	-	2.5e-05	23.5	0.0	0.031	13.5	0.0	2.3	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
Arch_ATPase	PF01637.13	gi|297526625|ref|YP_003668649.1|	-	2.8e-05	23.9	0.1	8.6e-05	22.3	0.0	1.8	1	1	0	1	1	1	1	Archaeal	ATPase
AAA_15	PF13175.1	gi|297526625|ref|YP_003668649.1|	-	0.00013	21.1	1.7	0.18	10.8	0.1	2.6	3	0	0	3	3	3	2	AAA	ATPase	domain
AAA	PF00004.24	gi|297526625|ref|YP_003668649.1|	-	0.00031	20.9	0.2	0.003	17.7	0.1	2.1	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_29	PF13555.1	gi|297526625|ref|YP_003668649.1|	-	0.00042	19.7	0.0	0.00081	18.8	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.1	gi|297526625|ref|YP_003668649.1|	-	0.00072	19.7	0.3	0.0048	17.0	0.2	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|297526625|ref|YP_003668649.1|	-	0.0017	18.0	0.0	0.0032	17.1	0.0	1.4	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_5	PF07728.9	gi|297526625|ref|YP_003668649.1|	-	0.0023	17.6	0.1	0.066	12.9	0.0	2.2	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_16	PF13191.1	gi|297526625|ref|YP_003668649.1|	-	0.0064	16.4	0.0	0.0087	16.0	0.0	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_10	PF12846.2	gi|297526625|ref|YP_003668649.1|	-	0.031	13.6	0.0	0.072	12.5	0.0	1.6	2	0	0	2	2	2	0	AAA-like	domain
AAA_18	PF13238.1	gi|297526625|ref|YP_003668649.1|	-	0.032	14.5	0.0	0.2	11.9	0.0	2.2	1	1	0	1	1	1	0	AAA	domain
AAA_33	PF13671.1	gi|297526625|ref|YP_003668649.1|	-	0.039	13.8	0.0	0.13	12.0	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
AAA_14	PF13173.1	gi|297526625|ref|YP_003668649.1|	-	0.04	13.8	0.0	0.14	12.0	0.0	2.0	1	1	1	2	2	2	0	AAA	domain
NACHT	PF05729.7	gi|297526625|ref|YP_003668649.1|	-	0.08	12.5	0.1	0.2	11.3	0.1	1.6	1	0	0	1	1	1	0	NACHT	domain
MobB	PF03205.9	gi|297526625|ref|YP_003668649.1|	-	0.092	12.4	0.2	2.6	7.7	0.0	2.8	3	1	0	3	3	3	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
SRP54	PF00448.17	gi|297526625|ref|YP_003668649.1|	-	0.11	11.9	0.1	0.22	10.9	0.0	1.5	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
AAA_30	PF13604.1	gi|297526625|ref|YP_003668649.1|	-	0.16	11.4	0.0	0.27	10.7	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
Wyosine_form	PF08608.7	gi|297526626|ref|YP_003668650.1|	-	5.1e-22	77.7	0.0	9.3e-22	76.9	0.0	1.5	1	0	0	1	1	1	1	Wyosine	base	formation
Radical_SAM	PF04055.16	gi|297526626|ref|YP_003668650.1|	-	2.9e-20	73.1	0.1	2.3e-19	70.1	0.0	2.4	2	1	0	2	2	2	1	Radical	SAM	superfamily
ParBc	PF02195.13	gi|297526627|ref|YP_003668651.1|	-	5.3e-14	52.0	0.5	3.3e-08	33.5	0.1	2.3	2	0	0	2	2	2	2	ParB-like	nuclease	domain
ParBc_2	PF08857.6	gi|297526627|ref|YP_003668651.1|	-	5.9e-05	22.9	0.1	0.037	13.8	0.0	2.3	2	0	0	2	2	2	2	Putative	ParB-like	nuclease
DUF3022	PF11226.3	gi|297526627|ref|YP_003668651.1|	-	0.16	11.8	0.0	0.32	10.8	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3022)
HTH_24	PF13412.1	gi|297526628|ref|YP_003668652.1|	-	2e-08	33.5	0.4	5.5e-08	32.0	0.0	2.0	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_27	PF13463.1	gi|297526628|ref|YP_003668652.1|	-	1.9e-05	24.8	0.0	5.8e-05	23.3	0.0	1.9	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_45	PF14947.1	gi|297526628|ref|YP_003668652.1|	-	3.5e-05	23.5	0.3	0.00012	21.7	0.2	1.9	1	0	0	1	1	1	1	Winged	helix-turn-helix
TrmB	PF01978.14	gi|297526628|ref|YP_003668652.1|	-	0.00014	21.5	0.0	0.00057	19.5	0.0	2.0	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.17	gi|297526628|ref|YP_003668652.1|	-	0.00071	19.2	0.0	0.0018	17.9	0.0	1.7	1	0	0	1	1	1	1	MarR	family
Fmp27_WPPW	PF10359.4	gi|297526628|ref|YP_003668652.1|	-	0.0029	16.1	1.7	0.0035	15.8	1.1	1.1	1	0	0	1	1	1	1	RNA	pol	II	promoter	Fmp27	protein	domain
Rrf2	PF02082.15	gi|297526628|ref|YP_003668652.1|	-	0.0029	17.6	0.0	0.014	15.5	0.0	2.1	2	0	0	2	2	2	1	Transcriptional	regulator
HTH_DeoR	PF08220.7	gi|297526628|ref|YP_003668652.1|	-	0.0047	16.4	0.0	0.012	15.0	0.0	1.7	1	0	0	1	1	1	1	DeoR-like	helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|297526628|ref|YP_003668652.1|	-	0.0067	16.3	0.0	0.023	14.6	0.0	1.9	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_IclR	PF09339.5	gi|297526628|ref|YP_003668652.1|	-	0.013	15.1	0.0	0.024	14.2	0.0	1.5	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
GP41	PF00517.12	gi|297526628|ref|YP_003668652.1|	-	0.05	13.1	1.7	0.078	12.5	1.2	1.3	1	0	0	1	1	1	0	Retroviral	envelope	protein
MarR_2	PF12802.2	gi|297526628|ref|YP_003668652.1|	-	0.068	12.8	0.0	0.15	11.7	0.0	1.6	1	0	0	1	1	1	0	MarR	family
HSBP1	PF06825.7	gi|297526628|ref|YP_003668652.1|	-	0.07	12.7	0.3	0.16	11.5	0.2	1.6	1	0	0	1	1	1	0	Heat	shock	factor	binding	protein	1
HTH_17	PF12728.2	gi|297526628|ref|YP_003668652.1|	-	0.088	13.0	0.0	0.26	11.5	0.0	1.8	1	0	0	1	1	1	0	Helix-turn-helix	domain
V_ATPase_I	PF01496.14	gi|297526628|ref|YP_003668652.1|	-	0.2	9.4	4.0	0.23	9.2	2.8	1.1	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
EAP30	PF04157.11	gi|297526628|ref|YP_003668652.1|	-	0.33	10.0	3.5	7.3	5.6	0.0	2.3	2	0	0	2	2	2	0	EAP30/Vps36	family
Thioredoxin_3	PF13192.1	gi|297526629|ref|YP_003668653.1|	-	5.1e-14	51.8	0.2	4.2e-06	26.4	0.2	2.9	2	1	0	2	2	2	2	Thioredoxin	domain
Thioredoxin_2	PF13098.1	gi|297526629|ref|YP_003668653.1|	-	9.9e-06	25.7	3.3	0.41	10.8	0.1	3.5	2	2	1	3	3	3	2	Thioredoxin-like	domain
Thioredoxin	PF00085.15	gi|297526629|ref|YP_003668653.1|	-	1.6e-05	24.5	0.1	0.028	14.0	0.0	2.4	2	0	0	2	2	2	2	Thioredoxin
Glutaredoxin	PF00462.19	gi|297526629|ref|YP_003668653.1|	-	0.00036	20.4	0.8	0.11	12.4	0.0	3.0	3	0	0	3	3	3	2	Glutaredoxin
Thioredoxin_9	PF14595.1	gi|297526629|ref|YP_003668653.1|	-	0.003	17.1	0.1	0.014	14.9	0.0	2.0	2	0	0	2	2	2	1	Thioredoxin
Thioredoxin_4	PF13462.1	gi|297526629|ref|YP_003668653.1|	-	0.0095	15.9	0.1	8.5	6.3	0.0	2.7	2	1	0	2	2	2	2	Thioredoxin
Kp4	PF09044.5	gi|297526629|ref|YP_003668653.1|	-	0.089	12.6	0.0	0.14	11.9	0.0	1.3	1	0	0	1	1	1	0	Kp4
Jag_N	PF14804.1	gi|297526629|ref|YP_003668653.1|	-	0.1	12.6	0.3	4.6	7.3	0.0	2.7	2	0	0	2	2	2	0	Jag	N-terminus
Fe_dep_repr_C	PF02742.10	gi|297526630|ref|YP_003668654.1|	-	1.2e-15	56.9	0.1	2.1e-15	56.1	0.1	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	metal	binding	and	dimerisation	domain
Fe_dep_repress	PF01325.14	gi|297526630|ref|YP_003668654.1|	-	8.7e-14	51.2	0.0	1.7e-13	50.2	0.0	1.4	1	0	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_27	PF13463.1	gi|297526630|ref|YP_003668654.1|	-	1.1e-07	32.0	0.0	1.9e-07	31.3	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
LexA_DNA_bind	PF01726.11	gi|297526630|ref|YP_003668654.1|	-	2.1e-07	30.3	0.1	4.9e-06	26.0	0.0	2.3	2	0	0	2	2	2	1	LexA	DNA	binding	domain
MarR_2	PF12802.2	gi|297526630|ref|YP_003668654.1|	-	5.4e-07	29.1	0.0	9.2e-07	28.4	0.0	1.3	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.1	gi|297526630|ref|YP_003668654.1|	-	3.7e-06	26.2	0.3	5.2e-05	22.5	0.0	2.5	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_IclR	PF09339.5	gi|297526630|ref|YP_003668654.1|	-	1e-05	25.0	0.0	1.7e-05	24.3	0.0	1.3	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
DUF2250	PF10007.4	gi|297526630|ref|YP_003668654.1|	-	4.1e-05	23.3	0.6	0.00018	21.3	0.1	2.0	2	0	0	2	2	2	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_36	PF13730.1	gi|297526630|ref|YP_003668654.1|	-	6.8e-05	22.9	0.0	0.0011	19.0	0.0	2.3	2	1	0	2	2	2	1	Helix-turn-helix	domain
IF2_N	PF04760.10	gi|297526630|ref|YP_003668654.1|	-	0.0001	21.9	0.1	0.00073	19.1	0.0	2.2	2	0	0	2	2	2	1	Translation	initiation	factor	IF-2,	N-terminal	region
HTH_5	PF01022.15	gi|297526630|ref|YP_003668654.1|	-	0.00013	21.5	0.0	0.00031	20.3	0.0	1.7	2	0	0	2	2	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_11	PF08279.7	gi|297526630|ref|YP_003668654.1|	-	0.00014	21.4	0.1	0.00098	18.7	0.0	2.4	3	0	0	3	3	2	1	HTH	domain
HTH_45	PF14947.1	gi|297526630|ref|YP_003668654.1|	-	0.00015	21.5	0.4	0.00058	19.6	0.0	2.0	2	0	0	2	2	2	1	Winged	helix-turn-helix
MarR	PF01047.17	gi|297526630|ref|YP_003668654.1|	-	0.00078	19.0	0.0	0.0015	18.1	0.0	1.5	1	0	0	1	1	1	1	MarR	family
HTH_28	PF13518.1	gi|297526630|ref|YP_003668654.1|	-	0.00086	19.2	0.0	0.0021	18.0	0.0	1.8	2	1	0	2	2	1	1	Helix-turn-helix	domain
DUF3791	PF12668.2	gi|297526630|ref|YP_003668654.1|	-	0.0009	18.8	0.1	0.065	12.8	0.0	2.3	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF3791)
HTH_38	PF13936.1	gi|297526630|ref|YP_003668654.1|	-	0.0012	18.3	0.0	0.0044	16.5	0.0	2.0	2	0	0	2	2	1	1	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|297526630|ref|YP_003668654.1|	-	0.0019	18.2	0.0	0.019	15.0	0.0	2.1	2	0	0	2	2	2	1	Transcriptional	regulator
TrmB	PF01978.14	gi|297526630|ref|YP_003668654.1|	-	0.0037	16.9	0.2	0.014	15.1	0.1	1.9	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
DUF4423	PF14394.1	gi|297526630|ref|YP_003668654.1|	-	0.0042	16.6	0.0	0.013	15.1	0.0	1.8	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
GntR	PF00392.16	gi|297526630|ref|YP_003668654.1|	-	0.0055	16.1	0.0	0.011	15.1	0.0	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	gntR	family
Sigma70_r3	PF04539.11	gi|297526630|ref|YP_003668654.1|	-	0.0086	15.9	0.2	0.015	15.2	0.1	1.4	1	0	0	1	1	1	1	Sigma-70	region	3
RE_AlwI	PF09491.5	gi|297526630|ref|YP_003668654.1|	-	0.009	14.5	0.4	0.098	11.1	0.0	2.0	1	1	1	2	2	2	1	AlwI	restriction	endonuclease
HTH_Crp_2	PF13545.1	gi|297526630|ref|YP_003668654.1|	-	0.01	15.6	0.0	0.074	12.8	0.0	2.3	2	1	0	2	2	2	0	Crp-like	helix-turn-helix	domain
HTH_10	PF04967.7	gi|297526630|ref|YP_003668654.1|	-	0.011	15.3	0.0	0.027	14.0	0.0	1.7	1	0	0	1	1	1	0	HTH	DNA	binding	domain
B-block_TFIIIC	PF04182.7	gi|297526630|ref|YP_003668654.1|	-	0.012	15.4	0.0	0.023	14.5	0.0	1.5	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
HTH_23	PF13384.1	gi|297526630|ref|YP_003668654.1|	-	0.02	14.5	0.1	0.088	12.4	0.0	2.2	1	1	1	2	2	2	0	Homeodomain-like	domain
HTH_3	PF01381.17	gi|297526630|ref|YP_003668654.1|	-	0.021	14.6	0.1	0.1	12.4	0.0	2.1	2	0	0	2	2	2	0	Helix-turn-helix
HTH_20	PF12840.2	gi|297526630|ref|YP_003668654.1|	-	0.028	14.2	0.0	0.066	13.0	0.0	1.6	1	1	0	1	1	1	0	Helix-turn-helix	domain
Mrr_N	PF14338.1	gi|297526630|ref|YP_003668654.1|	-	0.034	14.2	0.4	0.74	9.9	0.0	2.7	3	0	0	3	3	3	0	Mrr	N-terminal	domain
HTH_6	PF01418.12	gi|297526630|ref|YP_003668654.1|	-	0.039	13.6	0.0	0.2	11.4	0.0	1.9	2	0	0	2	2	2	0	Helix-turn-helix	domain,	rpiR	family
Topoisom_bac	PF01131.15	gi|297526630|ref|YP_003668654.1|	-	0.045	12.5	0.0	0.061	12.1	0.0	1.2	1	0	0	1	1	1	0	DNA	topoisomerase
HTH_29	PF13551.1	gi|297526630|ref|YP_003668654.1|	-	0.095	12.8	0.0	0.25	11.5	0.0	1.7	2	0	0	2	2	2	0	Winged	helix-turn	helix
HTH_17	PF12728.2	gi|297526630|ref|YP_003668654.1|	-	0.1	12.8	0.1	0.23	11.7	0.1	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
CENP-B_N	PF04218.8	gi|297526630|ref|YP_003668654.1|	-	0.1	12.0	0.0	0.28	10.6	0.0	1.8	2	0	0	2	2	2	0	CENP-B	N-terminal	DNA-binding	domain
HTH_34	PF13601.1	gi|297526630|ref|YP_003668654.1|	-	0.11	12.5	0.0	0.3	11.1	0.0	1.8	1	1	0	1	1	1	0	Winged	helix	DNA-binding	domain
Nuclease_act	PF08133.6	gi|297526630|ref|YP_003668654.1|	-	0.13	11.7	0.0	0.25	10.8	0.0	1.4	1	0	0	1	1	1	0	Anticodon	nuclease	activator	family
DUF1365	PF07103.6	gi|297526630|ref|YP_003668654.1|	-	0.13	11.2	0.0	0.17	10.8	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1365)
Lip_prot_lig_C	PF10437.4	gi|297526632|ref|YP_003668656.1|	-	2.5e-06	27.0	0.9	3.2e-06	26.7	0.6	1.2	1	0	0	1	1	1	1	Bacterial	lipoate	protein	ligase	C-terminus
BPL_LplA_LipB	PF03099.14	gi|297526633|ref|YP_003668657.1|	-	2.8e-23	82.2	0.1	4.2e-23	81.7	0.1	1.3	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
Borrelia_lipo_1	PF05714.6	gi|297526633|ref|YP_003668657.1|	-	0.0052	15.9	0.4	0.0078	15.3	0.3	1.2	1	0	0	1	1	1	1	Borrelia	burgdorferi	virulent	strain	associated	lipoprotein
PspB	PF06667.7	gi|297526633|ref|YP_003668657.1|	-	0.11	12.4	0.1	0.34	10.8	0.0	1.8	2	0	0	2	2	2	0	Phage	shock	protein	B
Radical_SAM	PF04055.16	gi|297526634|ref|YP_003668658.1|	-	5.9e-16	59.0	0.3	1e-12	48.5	0.0	2.5	2	1	0	2	2	2	2	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|297526634|ref|YP_003668658.1|	-	0.0097	16.0	0.4	0.51	10.4	0.0	2.7	3	1	0	3	3	3	1	4Fe-4S	single	cluster	domain
CPSase_L_D3	PF02787.14	gi|297526634|ref|YP_003668658.1|	-	0.04	13.6	0.1	0.14	11.8	0.0	1.8	2	0	0	2	2	2	0	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
Med26	PF08711.6	gi|297526634|ref|YP_003668658.1|	-	0.072	12.6	0.1	0.21	11.1	0.1	1.7	1	0	0	1	1	1	0	TFIIS	helical	bundle-like	domain
Radical_SAM	PF04055.16	gi|297526635|ref|YP_003668659.1|	-	7e-12	45.8	0.2	1.9e-11	44.3	0.1	1.7	1	1	1	2	2	2	1	Radical	SAM	superfamily
ABC_tran	PF00005.22	gi|297526637|ref|YP_003668661.1|	-	3.7e-44	150.3	0.0	1.4e-23	83.6	0.0	2.7	2	1	0	2	2	2	2	ABC	transporter
AAA_21	PF13304.1	gi|297526637|ref|YP_003668661.1|	-	7.6e-22	78.6	8.5	3.5e-09	37.0	0.0	4.2	3	1	1	4	4	4	3	AAA	domain
AAA_15	PF13175.1	gi|297526637|ref|YP_003668661.1|	-	4.1e-14	52.4	0.4	0.0013	17.8	0.0	4.1	4	0	0	4	4	4	3	AAA	ATPase	domain
AAA_23	PF13476.1	gi|297526637|ref|YP_003668661.1|	-	2.6e-10	40.9	2.8	0.00031	21.1	0.2	2.3	2	0	0	2	2	2	2	AAA	domain
AAA_29	PF13555.1	gi|297526637|ref|YP_003668661.1|	-	7.8e-10	38.1	0.6	0.00026	20.4	0.1	2.5	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.1	gi|297526637|ref|YP_003668661.1|	-	2.3e-07	31.0	0.0	0.00039	20.4	0.0	2.3	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_18	PF13238.1	gi|297526637|ref|YP_003668661.1|	-	3.7e-07	30.4	0.2	0.0071	16.6	0.0	3.7	4	0	0	4	4	4	2	AAA	domain
AAA_22	PF13401.1	gi|297526637|ref|YP_003668661.1|	-	1.2e-06	28.6	1.9	0.00076	19.6	0.1	2.5	2	1	0	2	2	2	1	AAA	domain
SMC_N	PF02463.14	gi|297526637|ref|YP_003668661.1|	-	1.7e-06	27.4	2.0	0.19	10.9	0.0	3.1	3	0	0	3	3	3	1	RecF/RecN/SMC	N	terminal	domain
DUF258	PF03193.11	gi|297526637|ref|YP_003668661.1|	-	2.1e-06	27.0	0.2	0.0011	18.1	0.1	2.2	2	0	0	2	2	2	1	Protein	of	unknown	function,	DUF258
AAA_19	PF13245.1	gi|297526637|ref|YP_003668661.1|	-	2.2e-06	27.3	0.3	0.0066	16.1	0.0	2.4	2	0	0	2	2	2	2	Part	of	AAA	domain
NACHT	PF05729.7	gi|297526637|ref|YP_003668661.1|	-	4.2e-06	26.5	0.8	0.01	15.4	0.1	2.4	2	0	0	2	2	2	2	NACHT	domain
UPF0079	PF02367.12	gi|297526637|ref|YP_003668661.1|	-	5.1e-06	26.1	0.6	0.02	14.5	0.1	2.4	2	0	0	2	2	2	2	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_17	PF13207.1	gi|297526637|ref|YP_003668661.1|	-	8.8e-06	26.5	5.1	0.012	16.4	0.6	2.8	2	2	0	2	2	2	2	AAA	domain
cobW	PF02492.14	gi|297526637|ref|YP_003668661.1|	-	1.1e-05	24.9	2.9	0.0079	15.6	0.3	2.2	2	0	0	2	2	2	2	CobW/HypB/UreG,	nucleotide-binding	domain
MobB	PF03205.9	gi|297526637|ref|YP_003668661.1|	-	1.8e-05	24.4	1.6	0.0033	17.1	0.1	2.4	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ArgK	PF03308.11	gi|297526637|ref|YP_003668661.1|	-	2e-05	23.5	0.2	0.035	12.9	0.1	2.2	2	0	0	2	2	2	2	ArgK	protein
NTPase_1	PF03266.10	gi|297526637|ref|YP_003668661.1|	-	2.1e-05	24.3	2.7	0.0068	16.1	0.2	2.4	2	0	0	2	2	2	2	NTPase
AAA_25	PF13481.1	gi|297526637|ref|YP_003668661.1|	-	2.8e-05	23.6	0.1	0.051	12.9	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
Arch_ATPase	PF01637.13	gi|297526637|ref|YP_003668661.1|	-	2.9e-05	23.9	2.3	0.0026	17.5	0.3	2.4	2	0	0	2	2	2	1	Archaeal	ATPase
NB-ARC	PF00931.17	gi|297526637|ref|YP_003668661.1|	-	3e-05	23.0	0.2	0.015	14.1	0.0	2.1	2	0	0	2	2	2	1	NB-ARC	domain
AAA_30	PF13604.1	gi|297526637|ref|YP_003668661.1|	-	3.6e-05	23.4	0.1	0.17	11.4	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
AAA_14	PF13173.1	gi|297526637|ref|YP_003668661.1|	-	5.4e-05	23.0	2.9	0.032	14.1	0.2	3.3	3	1	0	4	4	3	1	AAA	domain
T2SE	PF00437.15	gi|297526637|ref|YP_003668661.1|	-	8.1e-05	21.6	3.0	0.0033	16.3	0.2	2.2	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
AAA_10	PF12846.2	gi|297526637|ref|YP_003668661.1|	-	0.0001	21.8	0.1	0.019	14.4	0.0	2.4	2	0	0	2	2	2	1	AAA-like	domain
PRK	PF00485.13	gi|297526637|ref|YP_003668661.1|	-	0.00024	20.7	0.3	0.05	13.1	0.0	2.4	2	0	0	2	2	2	1	Phosphoribulokinase	/	Uridine	kinase	family
Pox_A32	PF04665.7	gi|297526637|ref|YP_003668661.1|	-	0.00082	18.7	2.3	0.0022	17.3	0.3	2.1	2	0	0	2	2	2	1	Poxvirus	A32	protein
Miro	PF08477.8	gi|297526637|ref|YP_003668661.1|	-	0.00091	19.7	0.3	1.1	9.7	0.1	2.4	2	0	0	2	2	2	1	Miro-like	protein
AAA_28	PF13521.1	gi|297526637|ref|YP_003668661.1|	-	0.0023	17.9	0.1	0.29	11.0	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
DUF2075	PF09848.4	gi|297526637|ref|YP_003668661.1|	-	0.0025	16.8	0.5	0.026	13.4	0.0	2.0	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
FtsK_SpoIIIE	PF01580.13	gi|297526637|ref|YP_003668661.1|	-	0.0028	17.1	0.3	0.033	13.6	0.1	2.1	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
AAA	PF00004.24	gi|297526637|ref|YP_003668661.1|	-	0.003	17.7	0.4	1.4	9.1	0.1	2.9	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
RNA_helicase	PF00910.17	gi|297526637|ref|YP_003668661.1|	-	0.0057	16.8	0.1	0.98	9.6	0.0	2.5	2	0	0	2	2	2	1	RNA	helicase
AAA_24	PF13479.1	gi|297526637|ref|YP_003668661.1|	-	0.0062	16.1	2.9	0.081	12.4	0.1	2.3	2	0	0	2	2	2	1	AAA	domain
MutS_V	PF00488.16	gi|297526637|ref|YP_003668661.1|	-	0.0091	15.4	0.1	1.6	8.1	0.0	2.1	2	0	0	2	2	2	1	MutS	domain	V
SbcCD_C	PF13558.1	gi|297526637|ref|YP_003668661.1|	-	0.0093	15.8	0.0	0.85	9.5	0.0	2.8	2	1	0	2	2	2	1	Putative	exonuclease	SbcCD,	C	subunit
PhoH	PF02562.11	gi|297526637|ref|YP_003668661.1|	-	0.011	14.9	0.2	0.17	11.0	0.0	2.1	2	0	0	2	2	2	0	PhoH-like	protein
Zeta_toxin	PF06414.7	gi|297526637|ref|YP_003668661.1|	-	0.014	14.4	0.1	2.6	7.0	0.0	2.2	2	0	0	2	2	2	0	Zeta	toxin
AAA_33	PF13671.1	gi|297526637|ref|YP_003668661.1|	-	0.015	15.1	0.4	0.5	10.2	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
Viral_helicase1	PF01443.13	gi|297526637|ref|YP_003668661.1|	-	0.016	14.7	0.6	0.24	10.8	0.0	2.3	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
ATP-synt_ab	PF00006.20	gi|297526637|ref|YP_003668661.1|	-	0.016	14.6	0.4	1.5	8.2	0.0	2.2	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
KaiC	PF06745.8	gi|297526637|ref|YP_003668661.1|	-	0.017	14.2	2.1	1.7	7.7	0.1	2.4	2	0	0	2	2	2	0	KaiC
PduV-EutP	PF10662.4	gi|297526637|ref|YP_003668661.1|	-	0.019	14.4	1.1	1	8.8	0.1	2.7	3	0	0	3	3	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
Rad17	PF03215.10	gi|297526637|ref|YP_003668661.1|	-	0.023	13.3	0.1	0.42	9.2	0.1	2.0	2	0	0	2	2	2	0	Rad17	cell	cycle	checkpoint	protein
ATP_bind_2	PF03668.10	gi|297526637|ref|YP_003668661.1|	-	0.029	13.4	0.4	0.32	10.0	0.0	2.2	2	0	0	2	2	2	0	P-loop	ATPase	protein	family
ABC_ATPase	PF09818.4	gi|297526637|ref|YP_003668661.1|	-	0.051	12.1	2.1	1.5	7.2	0.4	2.1	2	0	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
ATP_bind_1	PF03029.12	gi|297526637|ref|YP_003668661.1|	-	0.052	13.0	0.3	1.2	8.5	0.1	2.1	2	0	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
PIF1	PF05970.9	gi|297526637|ref|YP_003668661.1|	-	0.066	12.1	1.5	0.96	8.3	0.2	2.1	2	0	0	2	2	2	0	PIF1-like	helicase
Thymidylate_kin	PF02223.12	gi|297526637|ref|YP_003668661.1|	-	0.068	12.5	0.2	7.9	5.8	0.0	2.3	2	0	0	2	2	2	0	Thymidylate	kinase
Mg_chelatase	PF01078.16	gi|297526637|ref|YP_003668661.1|	-	0.072	12.2	0.2	3.4	6.7	0.0	2.2	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
KAP_NTPase	PF07693.9	gi|297526637|ref|YP_003668661.1|	-	0.078	11.9	0.0	3.1	6.7	0.0	2.1	2	0	0	2	2	2	0	KAP	family	P-loop	domain
Septin	PF00735.13	gi|297526637|ref|YP_003668661.1|	-	0.081	11.9	0.8	0.24	10.3	0.1	1.9	2	0	0	2	2	2	0	Septin
AAA_13	PF13166.1	gi|297526637|ref|YP_003668661.1|	-	0.081	11.3	3.0	0.15	10.4	0.1	2.1	2	0	0	2	2	2	0	AAA	domain
AAA_5	PF07728.9	gi|297526637|ref|YP_003668661.1|	-	0.1	12.2	0.4	2	8.1	0.0	2.3	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
APS_kinase	PF01583.15	gi|297526637|ref|YP_003668661.1|	-	0.11	12.1	0.5	0.95	9.1	0.1	2.2	2	0	0	2	2	2	0	Adenylylsulphate	kinase
SRP54	PF00448.17	gi|297526637|ref|YP_003668661.1|	-	0.16	11.3	2.0	6.5	6.1	0.2	2.4	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
MMR_HSR1	PF01926.18	gi|297526637|ref|YP_003668661.1|	-	0.38	10.7	5.9	0.51	10.3	0.8	2.6	2	2	0	2	2	2	0	50S	ribosome-binding	GTPase
DUF87	PF01935.12	gi|297526637|ref|YP_003668661.1|	-	1.2	8.8	5.4	0.91	9.2	0.9	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	DUF87
DUF3584	PF12128.3	gi|297526637|ref|YP_003668661.1|	-	1.3	6.2	4.2	0.78	6.9	0.1	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3584)
CbiA	PF01656.18	gi|297526637|ref|YP_003668661.1|	-	2.8	7.3	4.6	2.2	7.6	0.4	2.4	3	0	0	3	3	2	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ECF-ribofla_trS	PF07155.7	gi|297526638|ref|YP_003668662.1|	-	9.4e-28	97.0	30.7	8.3e-21	74.4	16.3	2.1	1	1	1	2	2	2	2	ECF-type	riboflavin	transporter,	S	component
5TM-5TMR_LYT	PF07694.7	gi|297526638|ref|YP_003668662.1|	-	0.00079	18.7	22.5	0.00079	18.7	15.6	2.1	1	1	1	2	2	2	1	5TMR	of	5TMR-LYT
DUF4229	PF14012.1	gi|297526638|ref|YP_003668662.1|	-	0.082	12.8	0.8	0.082	12.8	0.5	4.6	5	1	0	5	5	5	0	Protein	of	unknown	function	(DUF4229)
Phage_Coat_Gp8	PF05371.7	gi|297526638|ref|YP_003668662.1|	-	0.11	12.0	0.2	0.11	12.0	0.2	2.8	3	0	0	3	3	3	0	Phage	major	coat	protein,	Gp8
PALP	PF00291.20	gi|297526639|ref|YP_003668663.1|	-	3.6e-67	226.7	0.0	5.2e-67	226.2	0.0	1.2	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
HTH_11	PF08279.7	gi|297526639|ref|YP_003668663.1|	-	4.3e-05	23.0	0.0	8.2e-05	22.1	0.0	1.4	1	0	0	1	1	1	1	HTH	domain
HTH_24	PF13412.1	gi|297526639|ref|YP_003668663.1|	-	0.0002	20.6	0.1	0.00037	19.8	0.1	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_5	PF01022.15	gi|297526639|ref|YP_003668663.1|	-	0.00027	20.5	0.1	0.00048	19.7	0.0	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
TrmB	PF01978.14	gi|297526639|ref|YP_003668663.1|	-	0.00042	19.9	0.7	0.0046	16.6	0.0	2.7	3	0	0	3	3	3	1	Sugar-specific	transcriptional	regulator	TrmB
PadR	PF03551.9	gi|297526639|ref|YP_003668663.1|	-	0.00051	19.7	0.6	0.0015	18.2	0.2	2.0	2	0	0	2	2	2	1	Transcriptional	regulator	PadR-like	family
HTH_20	PF12840.2	gi|297526639|ref|YP_003668663.1|	-	0.001	18.8	0.0	0.0022	17.7	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR	PF01047.17	gi|297526639|ref|YP_003668663.1|	-	0.006	16.2	0.1	0.013	15.1	0.1	1.5	1	0	0	1	1	1	1	MarR	family
FUR	PF01475.14	gi|297526639|ref|YP_003668663.1|	-	0.022	14.7	0.1	0.11	12.3	0.0	2.1	2	0	0	2	2	2	0	Ferric	uptake	regulator	family
LexA_DNA_bind	PF01726.11	gi|297526639|ref|YP_003668663.1|	-	0.047	13.2	0.0	0.089	12.3	0.0	1.4	1	0	0	1	1	1	0	LexA	DNA	binding	domain
TF_Zn_Ribbon	PF08271.7	gi|297526639|ref|YP_003668663.1|	-	0.11	11.8	1.0	0.31	10.4	0.7	1.8	1	0	0	1	1	1	0	TFIIB	zinc-binding
zf-ribbon_3	PF13248.1	gi|297526639|ref|YP_003668663.1|	-	1.2	8.4	6.1	9.7	5.5	4.2	2.1	1	1	0	1	1	1	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|297526639|ref|YP_003668663.1|	-	1.9	8.0	5.7	10	5.7	4.1	2.0	1	1	0	1	1	1	0	zinc-ribbon	domain
AsnC_trans_reg	PF01037.16	gi|297526640|ref|YP_003668664.1|	-	1.4e-15	56.6	0.0	2.3e-15	56.0	0.0	1.3	1	0	0	1	1	1	1	AsnC	family
HTH_24	PF13412.1	gi|297526640|ref|YP_003668664.1|	-	2.3e-13	49.3	0.5	3.7e-13	48.6	0.4	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|297526640|ref|YP_003668664.1|	-	2.2e-11	43.0	0.2	4.3e-11	42.1	0.1	1.5	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_20	PF12840.2	gi|297526640|ref|YP_003668664.1|	-	3.4e-06	26.7	0.0	6.1e-06	25.9	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_38	PF13936.1	gi|297526640|ref|YP_003668664.1|	-	4.3e-05	22.9	0.1	9.2e-05	21.9	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
TrmB	PF01978.14	gi|297526640|ref|YP_003668664.1|	-	4.6e-05	23.0	0.0	9.7e-05	22.0	0.0	1.5	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_5	PF01022.15	gi|297526640|ref|YP_003668664.1|	-	5.7e-05	22.7	0.0	8.7e-05	22.1	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
MarR	PF01047.17	gi|297526640|ref|YP_003668664.1|	-	0.00029	20.4	0.1	0.0007	19.2	0.0	1.7	2	0	0	2	2	2	1	MarR	family
HTH_23	PF13384.1	gi|297526640|ref|YP_003668664.1|	-	0.00069	19.1	0.1	0.0016	18.0	0.0	1.6	2	0	0	2	2	1	1	Homeodomain-like	domain
HTH_28	PF13518.1	gi|297526640|ref|YP_003668664.1|	-	0.0017	18.3	0.0	0.0029	17.5	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
DUF2250	PF10007.4	gi|297526640|ref|YP_003668664.1|	-	0.0024	17.7	0.1	0.0045	16.8	0.0	1.4	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
Sigma70_r4_2	PF08281.7	gi|297526640|ref|YP_003668664.1|	-	0.0025	17.2	0.1	0.0044	16.4	0.1	1.4	1	0	0	1	1	1	1	Sigma-70,	region	4
HTH_11	PF08279.7	gi|297526640|ref|YP_003668664.1|	-	0.0033	17.0	1.2	0.0051	16.4	0.2	1.8	2	0	0	2	2	2	1	HTH	domain
HTH_36	PF13730.1	gi|297526640|ref|YP_003668664.1|	-	0.0051	16.9	0.1	0.011	15.8	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_34	PF13601.1	gi|297526640|ref|YP_003668664.1|	-	0.013	15.4	0.0	0.036	14.1	0.0	1.7	1	1	1	2	2	2	0	Winged	helix	DNA-binding	domain
PadR	PF03551.9	gi|297526640|ref|YP_003668664.1|	-	0.043	13.5	0.0	0.14	11.9	0.0	1.9	2	0	0	2	2	2	0	Transcriptional	regulator	PadR-like	family
HTH_IclR	PF09339.5	gi|297526640|ref|YP_003668664.1|	-	0.045	13.3	0.0	0.079	12.5	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
MarR_2	PF12802.2	gi|297526640|ref|YP_003668664.1|	-	0.052	13.2	0.0	0.093	12.4	0.0	1.4	1	0	0	1	1	1	0	MarR	family
HTH_WhiA	PF02650.9	gi|297526640|ref|YP_003668664.1|	-	0.068	13.5	1.2	6.5	7.2	0.0	2.9	2	1	0	2	2	2	0	WhiA	C-terminal	HTH	domain
Rrf2	PF02082.15	gi|297526640|ref|YP_003668664.1|	-	0.11	12.6	0.0	1.7	8.8	0.0	2.2	2	0	0	2	2	2	0	Transcriptional	regulator
NUMOD1	PF07453.8	gi|297526640|ref|YP_003668664.1|	-	0.13	12.1	0.9	6.1	6.8	0.1	2.5	2	0	0	2	2	2	0	NUMOD1	domain
Gln-synt_C	PF00120.19	gi|297526641|ref|YP_003668665.1|	-	9.5e-86	287.1	0.0	1.2e-85	286.8	0.0	1.1	1	0	0	1	1	1	1	Glutamine	synthetase,	catalytic	domain
Gln-synt_N	PF03951.14	gi|297526641|ref|YP_003668665.1|	-	4.5e-14	51.7	0.0	8e-14	50.9	0.0	1.4	1	0	0	1	1	1	1	Glutamine	synthetase,	beta-Grasp	domain
HATPase_c_2	PF13581.1	gi|297526641|ref|YP_003668665.1|	-	0.0075	16.0	0.0	0.013	15.2	0.0	1.4	1	0	0	1	1	1	1	Histidine	kinase-like	ATPase	domain
ERCC4	PF02732.10	gi|297526642|ref|YP_003668666.1|	-	4.4e-19	68.6	0.0	8.2e-19	67.7	0.0	1.4	1	0	0	1	1	1	1	ERCC4	domain
HHH_2	PF12826.2	gi|297526642|ref|YP_003668666.1|	-	4.3e-12	45.7	0.0	8.6e-12	44.7	0.0	1.5	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
HHH_5	PF14520.1	gi|297526642|ref|YP_003668666.1|	-	5.3e-10	39.3	0.1	4.2e-09	36.4	0.0	2.3	2	0	0	2	2	2	1	Helix-hairpin-helix	domain
HHH	PF00633.18	gi|297526642|ref|YP_003668666.1|	-	1.8e-07	30.4	0.4	2.4e-06	26.8	0.0	2.9	3	0	0	3	3	3	1	Helix-hairpin-helix	motif
HHH_3	PF12836.2	gi|297526642|ref|YP_003668666.1|	-	0.03	14.2	0.2	0.17	11.8	0.0	2.2	1	1	2	3	3	3	0	Helix-hairpin-helix	motif
5_3_exonuc	PF01367.15	gi|297526642|ref|YP_003668666.1|	-	0.039	14.1	0.0	1.3	9.2	0.0	2.3	1	1	1	2	2	2	0	5'-3'	exonuclease,	C-terminal	SAM	fold
Pex2_Pex12	PF04757.9	gi|297526642|ref|YP_003668666.1|	-	0.051	12.9	0.0	0.057	12.8	0.0	1.2	1	0	0	1	1	1	0	Pex2	/	Pex12	amino	terminal	region
VWA_3	PF13768.1	gi|297526642|ref|YP_003668666.1|	-	0.092	12.4	0.0	0.18	11.4	0.0	1.5	1	0	0	1	1	1	0	von	Willebrand	factor	type	A	domain
Glycos_transf_4	PF00953.16	gi|297526643|ref|YP_003668667.1|	-	4.2e-30	104.6	16.8	4.2e-30	104.6	11.6	2.3	2	1	0	2	2	2	1	Glycosyl	transferase	family	4
DUF2811	PF10929.3	gi|297526643|ref|YP_003668667.1|	-	0.063	13.3	0.1	0.14	12.1	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2811)
PepSY_TM	PF03929.11	gi|297526643|ref|YP_003668667.1|	-	0.26	11.7	0.3	0.26	11.7	0.2	3.9	3	0	0	3	3	3	0	PepSY-associated	TM	helix
PAP2	PF01569.16	gi|297526643|ref|YP_003668667.1|	-	0.89	9.2	6.8	5.5	6.6	0.4	2.5	2	0	0	2	2	2	0	PAP2	superfamily
HMG-CoA_red	PF00368.13	gi|297526644|ref|YP_003668668.1|	-	8.7e-85	284.6	5.3	1.1e-84	284.2	3.7	1.1	1	0	0	1	1	1	1	Hydroxymethylglutaryl-coenzyme	A	reductase
Phasin_2	PF09361.5	gi|297526644|ref|YP_003668668.1|	-	0.086	12.8	0.0	0.32	11.0	0.0	1.9	1	1	0	1	1	1	0	Phasin	protein
F420_ligase	PF01996.11	gi|297526645|ref|YP_003668669.1|	-	0.034	13.1	0.1	0.068	12.2	0.1	1.7	1	1	0	1	1	1	0	F420-0:Gamma-glutamyl	ligase
UPRTase	PF14681.1	gi|297526646|ref|YP_003668670.1|	-	2.3e-49	167.4	0.0	2.7e-49	167.1	0.0	1.0	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
Pribosyltran	PF00156.22	gi|297526646|ref|YP_003668670.1|	-	1.4e-10	40.9	0.1	2.9e-10	39.9	0.1	1.5	2	0	0	2	2	2	1	Phosphoribosyl	transferase	domain
PRTase_2	PF15609.1	gi|297526646|ref|YP_003668670.1|	-	0.0052	16.1	0.0	0.0083	15.4	0.0	1.6	1	1	0	1	1	1	1	Phosphoribosyl	transferase
NTP_transf_3	PF12804.2	gi|297526647|ref|YP_003668671.1|	-	4.8e-32	111.2	0.0	6e-32	110.9	0.0	1.0	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.14	gi|297526647|ref|YP_003668671.1|	-	4.8e-08	32.7	0.0	6.3e-08	32.4	0.0	1.3	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
CTP_transf_3	PF02348.14	gi|297526647|ref|YP_003668671.1|	-	1.5e-07	31.2	0.0	1.7e-07	31.1	0.0	1.2	1	0	0	1	1	1	1	Cytidylyltransferase
NTP_transferase	PF00483.18	gi|297526647|ref|YP_003668671.1|	-	0.00067	19.0	0.0	0.00098	18.4	0.0	1.2	1	0	0	1	1	1	1	Nucleotidyl	transferase
ABC_tran	PF00005.22	gi|297526648|ref|YP_003668672.1|	-	3.4e-28	98.6	0.0	5e-28	98.1	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297526648|ref|YP_003668672.1|	-	9.3e-15	55.3	0.6	2e-12	47.6	0.4	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.1	gi|297526648|ref|YP_003668672.1|	-	0.00019	21.8	0.7	0.00035	20.9	0.5	1.3	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|297526648|ref|YP_003668672.1|	-	0.0003	19.9	0.0	0.26	10.2	0.0	2.2	1	1	1	2	2	2	2	AAA	ATPase	domain
SMC_N	PF02463.14	gi|297526648|ref|YP_003668672.1|	-	0.00084	18.6	0.3	0.45	9.7	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|297526648|ref|YP_003668672.1|	-	0.0011	18.4	0.1	0.002	17.5	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
SRP54	PF00448.17	gi|297526648|ref|YP_003668672.1|	-	0.017	14.5	0.1	0.16	11.3	0.0	2.0	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
AAA	PF00004.24	gi|297526648|ref|YP_003668672.1|	-	0.019	15.1	0.0	0.037	14.2	0.0	1.6	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_19	PF13245.1	gi|297526648|ref|YP_003668672.1|	-	0.023	14.4	0.0	0.049	13.3	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_22	PF13401.1	gi|297526648|ref|YP_003668672.1|	-	0.034	14.3	0.2	0.11	12.6	0.2	1.8	1	1	0	1	1	1	0	AAA	domain
AAA_17	PF13207.1	gi|297526648|ref|YP_003668672.1|	-	0.043	14.6	0.3	0.086	13.6	0.1	1.8	1	1	0	1	1	1	0	AAA	domain
MobB	PF03205.9	gi|297526648|ref|YP_003668672.1|	-	0.054	13.1	0.1	0.16	11.6	0.0	1.8	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_30	PF13604.1	gi|297526648|ref|YP_003668672.1|	-	0.14	11.7	0.0	0.24	10.9	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
ABC2_membrane_3	PF12698.2	gi|297526649|ref|YP_003668673.1|	-	9.1e-25	87.4	38.4	1.1e-24	87.1	26.6	1.0	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.2	gi|297526649|ref|YP_003668673.1|	-	8.1e-16	57.7	24.8	1.4e-15	56.9	17.2	1.3	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|297526649|ref|YP_003668673.1|	-	4.9e-06	25.8	44.9	8.6e-06	25.0	31.1	1.5	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane	PF01061.19	gi|297526649|ref|YP_003668673.1|	-	6.6e-06	25.4	32.0	0.00022	20.4	15.9	3.5	2	1	0	3	3	3	2	ABC-2	type	transporter
HAMP	PF00672.20	gi|297526650|ref|YP_003668674.1|	-	0.12	12.5	0.1	0.17	12.0	0.0	1.2	1	0	0	1	1	1	0	HAMP	domain
Peptidase_M17	PF00883.16	gi|297526651|ref|YP_003668675.1|	-	1.2e-111	372.5	0.0	1.7e-111	372.0	0.0	1.2	1	0	0	1	1	1	1	Cytosol	aminopeptidase	family,	catalytic	domain
Peptidase_M17_N	PF02789.12	gi|297526651|ref|YP_003668675.1|	-	4.9e-11	42.4	0.0	1.1e-10	41.3	0.0	1.6	1	0	0	1	1	1	1	Cytosol	aminopeptidase	family,	N-terminal	domain
PhoU_div	PF01865.11	gi|297526652|ref|YP_003668676.1|	-	5.5e-35	120.4	12.8	6.1e-35	120.3	8.9	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF47
PhoU	PF01895.14	gi|297526652|ref|YP_003668676.1|	-	1.4e-05	25.3	14.3	0.0007	19.9	2.3	2.5	1	1	0	2	2	2	2	PhoU	domain
DUF1366	PF07104.6	gi|297526652|ref|YP_003668676.1|	-	0.39	10.3	6.0	0.22	11.1	1.1	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1366)
TrmB	PF01978.14	gi|297526653|ref|YP_003668677.1|	-	1.3e-06	27.9	0.7	2.3e-06	27.2	0.2	1.6	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.5	gi|297526653|ref|YP_003668677.1|	-	0.0012	18.4	0.3	0.11	12.0	0.1	2.2	2	0	0	2	2	2	1	IclR	helix-turn-helix	domain
PC4	PF02229.11	gi|297526653|ref|YP_003668677.1|	-	0.0067	15.6	0.0	0.016	14.4	0.0	1.7	1	0	0	1	1	1	1	Transcriptional	Coactivator	p15	(PC4)
Rrf2	PF02082.15	gi|297526653|ref|YP_003668677.1|	-	0.01	15.9	0.3	0.96	9.6	0.1	2.2	2	0	0	2	2	2	1	Transcriptional	regulator
HTH_27	PF13463.1	gi|297526653|ref|YP_003668677.1|	-	0.028	14.7	0.1	0.043	14.1	0.0	1.4	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_5	PF01022.15	gi|297526653|ref|YP_003668677.1|	-	0.058	13.0	0.0	0.21	11.2	0.0	1.9	2	0	0	2	2	2	0	Bacterial	regulatory	protein,	arsR	family
IFT46_B_C	PF12317.3	gi|297526653|ref|YP_003668677.1|	-	0.1	11.9	0.0	0.12	11.6	0.0	1.1	1	0	0	1	1	1	0	Intraflagellar	transport	complex	B	protein	46	C	terminal
RHH_1	PF01402.16	gi|297526654|ref|YP_003668678.1|	-	0.0048	16.7	0.0	0.01	15.7	0.0	1.6	1	1	1	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
Ribosomal_L13e	PF01294.13	gi|297526655|ref|YP_003668679.1|	-	2.2e-09	37.0	0.0	2.6e-09	36.7	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L13e
DUF211	PF02680.9	gi|297526656|ref|YP_003668680.1|	-	1.1e-33	114.9	7.4	1.3e-33	114.6	5.1	1.0	1	0	0	1	1	1	1	Uncharacterized	ArCR,	COG1888
IncA	PF04156.9	gi|297526658|ref|YP_003668682.1|	-	1.6	8.2	5.4	2.3	7.7	3.7	1.2	1	0	0	1	1	1	0	IncA	protein
DUF1673	PF07895.6	gi|297526658|ref|YP_003668682.1|	-	6.7	6.1	8.3	6.9	6.1	5.0	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1673)
Metallophos_2	PF12850.2	gi|297526659|ref|YP_003668683.1|	-	1.8e-21	76.6	0.0	2.2e-21	76.3	0.0	1.1	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|297526659|ref|YP_003668683.1|	-	6.8e-07	28.8	0.8	0.00048	19.5	0.2	2.3	1	1	1	2	2	2	2	Calcineurin-like	phosphoesterase
NfeD	PF01957.13	gi|297526660|ref|YP_003668684.1|	-	5.9e-26	91.3	1.1	5.9e-26	91.3	0.8	2.4	3	0	0	3	3	3	1	NfeD-like	C-terminal,	partner-binding
CLP_protease	PF00574.18	gi|297526660|ref|YP_003668684.1|	-	0.0025	17.5	0.1	0.0039	16.8	0.1	1.3	1	0	0	1	1	1	1	Clp	protease
SDH_sah	PF01972.11	gi|297526660|ref|YP_003668684.1|	-	0.0042	15.9	0.6	0.0077	15.0	0.4	1.4	1	0	0	1	1	1	1	Serine	dehydrogenase	proteinase
TrkA_C	PF02080.16	gi|297526660|ref|YP_003668684.1|	-	0.045	13.3	0.1	0.2	11.2	0.0	2.0	1	1	0	1	1	1	0	TrkA-C	domain
Band_7	PF01145.20	gi|297526661|ref|YP_003668685.1|	-	1e-35	123.2	2.9	1.2e-35	123.0	2.0	1.1	1	0	0	1	1	1	1	SPFH	domain	/	Band	7	family
Band_7_1	PF13421.1	gi|297526661|ref|YP_003668685.1|	-	0.00068	19.2	0.1	0.0013	18.3	0.1	1.4	1	0	0	1	1	1	1	SPFH	domain-Band	7	family
HD	PF01966.17	gi|297526662|ref|YP_003668686.1|	-	2.7e-14	53.2	0.8	6.2e-13	48.8	0.1	2.0	2	0	0	2	2	2	1	HD	domain
CCDC84	PF14968.1	gi|297526662|ref|YP_003668686.1|	-	0.35	10.3	1.3	0.48	9.8	0.9	1.2	1	0	0	1	1	1	0	Coiled	coil	protein	84
ABC_tran	PF00005.22	gi|297526663|ref|YP_003668687.1|	-	9.2e-34	116.6	0.0	2.4e-33	115.3	0.0	1.7	2	0	0	2	2	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297526663|ref|YP_003668687.1|	-	2.4e-10	40.8	0.0	1.5e-06	28.4	0.0	2.2	1	1	0	2	2	2	2	AAA	domain
TOBE_2	PF08402.5	gi|297526663|ref|YP_003668687.1|	-	9.8e-07	28.6	0.0	1.5e-05	24.9	0.0	2.5	3	0	0	3	3	2	1	TOBE	domain
AAA_15	PF13175.1	gi|297526663|ref|YP_003668687.1|	-	8.8e-05	21.7	0.0	0.002	17.2	0.0	2.1	2	0	0	2	2	2	1	AAA	ATPase	domain
RNA_helicase	PF00910.17	gi|297526663|ref|YP_003668687.1|	-	0.0023	18.0	0.0	0.0052	16.9	0.0	1.6	1	0	0	1	1	1	1	RNA	helicase
AAA_22	PF13401.1	gi|297526663|ref|YP_003668687.1|	-	0.0051	16.9	3.0	0.028	14.5	1.3	2.3	2	1	0	2	2	1	1	AAA	domain
AAA	PF00004.24	gi|297526663|ref|YP_003668687.1|	-	0.0061	16.7	0.2	0.08	13.1	0.0	2.5	3	0	0	3	3	3	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.1	gi|297526663|ref|YP_003668687.1|	-	0.0085	16.0	0.3	0.018	15.0	0.2	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
Rad17	PF03215.10	gi|297526663|ref|YP_003668687.1|	-	0.0094	14.6	0.0	0.013	14.2	0.0	1.2	1	0	0	1	1	1	1	Rad17	cell	cycle	checkpoint	protein
AAA_23	PF13476.1	gi|297526663|ref|YP_003668687.1|	-	0.012	15.9	0.1	0.042	14.1	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
AAA_28	PF13521.1	gi|297526663|ref|YP_003668687.1|	-	0.013	15.4	0.2	0.68	9.8	0.0	2.7	3	0	0	3	3	3	0	AAA	domain
SMC_N	PF02463.14	gi|297526663|ref|YP_003668687.1|	-	0.018	14.2	0.1	0.14	11.4	0.0	2.0	1	1	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
AAA_19	PF13245.1	gi|297526663|ref|YP_003668687.1|	-	0.02	14.6	0.0	0.21	11.3	0.0	2.3	2	0	0	2	2	2	0	Part	of	AAA	domain
Arch_ATPase	PF01637.13	gi|297526663|ref|YP_003668687.1|	-	0.02	14.5	0.1	0.051	13.2	0.0	1.7	2	0	0	2	2	2	0	Archaeal	ATPase
Miro	PF08477.8	gi|297526663|ref|YP_003668687.1|	-	0.046	14.2	0.0	7.1	7.1	0.0	2.5	2	0	0	2	2	2	0	Miro-like	protein
DUF258	PF03193.11	gi|297526663|ref|YP_003668687.1|	-	0.057	12.6	0.0	0.11	11.6	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_14	PF13173.1	gi|297526663|ref|YP_003668687.1|	-	0.076	12.9	0.0	0.18	11.7	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_29	PF13555.1	gi|297526663|ref|YP_003668687.1|	-	0.11	12.0	0.0	0.22	11.0	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_25	PF13481.1	gi|297526663|ref|YP_003668687.1|	-	0.11	11.8	0.0	2	7.7	0.0	2.3	2	1	0	2	2	2	0	AAA	domain
AAA_17	PF13207.1	gi|297526663|ref|YP_003668687.1|	-	0.19	12.5	1.1	0.69	10.7	0.8	2.0	1	1	0	1	1	1	0	AAA	domain
BPD_transp_1	PF00528.17	gi|297526664|ref|YP_003668688.1|	-	7.1e-20	71.2	44.9	2.3e-11	43.5	15.3	4.7	4	1	1	5	5	5	2	Binding-protein-dependent	transport	system	inner	membrane	component
SBP_bac_6	PF13343.1	gi|297526665|ref|YP_003668689.1|	-	3.7e-22	78.8	0.3	5.8e-22	78.1	0.2	1.3	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_8	PF13416.1	gi|297526665|ref|YP_003668689.1|	-	3.4e-18	66.3	2.8	6.7e-18	65.4	1.9	1.4	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_1	PF01547.20	gi|297526665|ref|YP_003668689.1|	-	4.3e-14	52.9	6.7	1.4e-13	51.2	4.7	1.7	1	1	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_11	PF13531.1	gi|297526665|ref|YP_003668689.1|	-	2.5e-07	30.5	0.7	2e-06	27.6	0.0	2.6	2	1	0	2	2	2	1	Bacterial	extracellular	solute-binding	protein
Cloacin_immun	PF03513.9	gi|297526665|ref|YP_003668689.1|	-	0.0032	17.4	0.2	2	8.5	0.0	2.4	2	0	0	2	2	2	2	Cloacin	immunity	protein
Mucin	PF01456.12	gi|297526665|ref|YP_003668689.1|	-	0.0035	17.1	39.7	0.0077	16.0	27.5	1.5	1	0	0	1	1	1	1	Mucin-like	glycoprotein
Rifin_STEVOR	PF02009.11	gi|297526665|ref|YP_003668689.1|	-	0.011	15.3	0.3	0.017	14.7	0.2	1.4	1	0	0	1	1	1	0	Rifin/stevor	family
AJAP1_PANP_C	PF15298.1	gi|297526665|ref|YP_003668689.1|	-	0.017	14.9	22.4	0.034	14.0	15.5	1.5	1	0	0	1	1	1	0	AJAP1/PANP	C-terminus
Pex14_N	PF04695.8	gi|297526665|ref|YP_003668689.1|	-	0.25	11.3	3.4	0.53	10.3	2.4	1.5	1	0	0	1	1	1	0	Peroxisomal	membrane	anchor	protein	(Pex14p)	conserved	region
Glycophorin_A	PF01102.13	gi|297526665|ref|YP_003668689.1|	-	2.2	8.0	12.1	4.5	7.0	8.4	1.5	1	0	0	1	1	1	0	Glycophorin	A
TMEM154	PF15102.1	gi|297526665|ref|YP_003668689.1|	-	3.2	7.4	13.8	6.8	6.3	9.6	1.6	1	0	0	1	1	1	0	TMEM154	protein	family
MGC-24	PF05283.6	gi|297526665|ref|YP_003668689.1|	-	7.1	6.3	22.1	11	5.7	15.3	1.3	1	0	0	1	1	1	0	Multi-glycosylated	core	protein	24	(MGC-24)
DUF2223	PF09985.4	gi|297526666|ref|YP_003668690.1|	-	1.7e-79	266.3	2.0	3.2e-79	265.4	1.4	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF2223)
ABC_transp_aux	PF09822.4	gi|297526666|ref|YP_003668690.1|	-	1.3e-12	47.7	0.0	2.8e-05	23.7	0.0	2.3	2	0	0	2	2	2	2	ABC-type	uncharacterized	transport	system
DUF4350	PF14258.1	gi|297526666|ref|YP_003668690.1|	-	4e-05	23.7	1.1	0.12	12.5	0.0	3.6	3	0	0	3	3	3	2	Domain	of	unknown	function	(DUF4350)
Rifin_STEVOR	PF02009.11	gi|297526666|ref|YP_003668690.1|	-	0.0044	16.7	1.0	0.0061	16.2	0.7	1.2	1	0	0	1	1	1	1	Rifin/stevor	family
ThuA	PF06283.6	gi|297526666|ref|YP_003668690.1|	-	0.027	14.1	0.0	1.7	8.3	0.0	2.6	2	0	0	2	2	2	0	Trehalose	utilisation
FtsJ	PF01728.14	gi|297526666|ref|YP_003668690.1|	-	0.23	11.4	0.0	7.7	6.4	0.0	2.3	2	0	0	2	2	2	0	FtsJ-like	methyltransferase
Metallophos	PF00149.23	gi|297526667|ref|YP_003668691.1|	-	9.7e-17	61.0	3.4	2.7e-16	59.5	2.4	1.8	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|297526667|ref|YP_003668691.1|	-	7.6e-07	29.0	0.0	1.5e-06	28.1	0.0	1.5	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Rifin_STEVOR	PF02009.11	gi|297526667|ref|YP_003668691.1|	-	0.19	11.3	3.4	0.38	10.3	2.4	1.6	1	1	0	1	1	1	0	Rifin/stevor	family
Pex14_N	PF04695.8	gi|297526667|ref|YP_003668691.1|	-	3.2	7.8	8.8	7	6.7	6.1	1.6	1	0	0	1	1	1	0	Peroxisomal	membrane	anchor	protein	(Pex14p)	conserved	region
Hjc	PF01870.13	gi|297526668|ref|YP_003668692.1|	-	1.2e-25	88.9	0.4	1.8e-25	88.3	0.3	1.3	1	0	0	1	1	1	1	Archaeal	holliday	junction	resolvase	(hjc)
RecU	PF03838.9	gi|297526668|ref|YP_003668692.1|	-	0.0068	15.9	0.0	0.0077	15.7	0.0	1.1	1	0	0	1	1	1	1	Recombination	protein	U
T2SE	PF00437.15	gi|297526670|ref|YP_003668694.1|	-	3.1e-11	42.6	0.0	5.4e-11	41.9	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
PIN	PF01850.16	gi|297526670|ref|YP_003668694.1|	-	5e-06	26.8	0.0	1.3e-05	25.4	0.0	1.8	1	0	0	1	1	1	1	PIN	domain
AAA_17	PF13207.1	gi|297526670|ref|YP_003668694.1|	-	1.9e-05	25.4	0.0	0.00012	22.9	0.0	2.4	2	0	0	2	2	1	1	AAA	domain
AAA_16	PF13191.1	gi|297526670|ref|YP_003668694.1|	-	0.00044	20.2	0.0	0.0012	18.8	0.0	1.7	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_18	PF13238.1	gi|297526670|ref|YP_003668694.1|	-	0.00049	20.4	0.0	0.0017	18.6	0.0	2.1	1	0	0	1	1	1	1	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|297526670|ref|YP_003668694.1|	-	0.001	18.5	0.0	0.024	14.1	0.0	2.4	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
IstB_IS21	PF01695.12	gi|297526670|ref|YP_003668694.1|	-	0.0011	18.3	0.0	0.0024	17.3	0.0	1.5	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_25	PF13481.1	gi|297526670|ref|YP_003668694.1|	-	0.0013	18.1	0.1	0.0039	16.6	0.0	1.8	2	0	0	2	2	1	1	AAA	domain
AAA	PF00004.24	gi|297526670|ref|YP_003668694.1|	-	0.0019	18.4	0.6	0.013	15.6	0.0	2.3	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
SRP54	PF00448.17	gi|297526670|ref|YP_003668694.1|	-	0.0027	17.1	0.1	0.0048	16.3	0.0	1.3	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
AAA_19	PF13245.1	gi|297526670|ref|YP_003668694.1|	-	0.0035	17.0	0.0	0.01	15.5	0.0	1.8	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_28	PF13521.1	gi|297526670|ref|YP_003668694.1|	-	0.0036	17.2	0.0	0.0075	16.2	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|297526670|ref|YP_003668694.1|	-	0.004	17.0	0.0	0.014	15.3	0.0	1.9	2	0	0	2	2	1	1	AAA	domain
AAA_22	PF13401.1	gi|297526670|ref|YP_003668694.1|	-	0.0041	17.2	0.0	0.039	14.0	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
AAA_33	PF13671.1	gi|297526670|ref|YP_003668694.1|	-	0.0052	16.6	0.1	0.061	13.2	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
RuvB_N	PF05496.7	gi|297526670|ref|YP_003668694.1|	-	0.0057	15.7	0.0	0.011	14.8	0.0	1.4	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
DnaB_C	PF03796.10	gi|297526670|ref|YP_003668694.1|	-	0.0063	15.4	0.0	0.012	14.5	0.0	1.3	1	0	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
ArgK	PF03308.11	gi|297526670|ref|YP_003668694.1|	-	0.013	14.3	0.0	0.027	13.2	0.0	1.4	1	0	0	1	1	1	0	ArgK	protein
AAA_5	PF07728.9	gi|297526670|ref|YP_003668694.1|	-	0.014	15.1	0.0	0.036	13.7	0.0	1.7	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
NACHT	PF05729.7	gi|297526670|ref|YP_003668694.1|	-	0.014	15.0	0.1	0.028	14.0	0.1	1.5	1	0	0	1	1	1	0	NACHT	domain
NTPase_1	PF03266.10	gi|297526670|ref|YP_003668694.1|	-	0.016	14.9	0.1	0.083	12.5	0.0	2.2	2	0	0	2	2	2	0	NTPase
AAA_30	PF13604.1	gi|297526670|ref|YP_003668694.1|	-	0.019	14.5	0.1	0.042	13.4	0.1	1.5	1	0	0	1	1	1	0	AAA	domain
ATP_bind_1	PF03029.12	gi|297526670|ref|YP_003668694.1|	-	0.021	14.3	0.0	0.036	13.5	0.0	1.4	1	0	0	1	1	1	0	Conserved	hypothetical	ATP	binding	protein
KTI12	PF08433.5	gi|297526670|ref|YP_003668694.1|	-	0.021	14.0	0.0	0.042	13.0	0.0	1.4	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
Zeta_toxin	PF06414.7	gi|297526670|ref|YP_003668694.1|	-	0.029	13.4	0.1	0.082	11.9	0.0	1.7	1	0	0	1	1	1	0	Zeta	toxin
RNA_helicase	PF00910.17	gi|297526670|ref|YP_003668694.1|	-	0.038	14.1	0.0	0.079	13.1	0.0	1.6	1	1	0	1	1	1	0	RNA	helicase
PrpR_N	PF06506.6	gi|297526670|ref|YP_003668694.1|	-	0.041	13.2	0.1	0.12	11.7	0.0	1.8	1	0	0	1	1	1	0	Propionate	catabolism	activator
Thymidylate_kin	PF02223.12	gi|297526670|ref|YP_003668694.1|	-	0.042	13.2	0.1	0.1	11.9	0.0	1.7	1	1	1	2	2	2	0	Thymidylate	kinase
UPF0079	PF02367.12	gi|297526670|ref|YP_003668694.1|	-	0.045	13.3	0.0	0.093	12.3	0.0	1.5	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
DUF815	PF05673.8	gi|297526670|ref|YP_003668694.1|	-	0.069	12.0	0.0	0.12	11.2	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
CbiA	PF01656.18	gi|297526670|ref|YP_003668694.1|	-	0.071	12.5	0.0	0.12	11.7	0.0	1.5	1	0	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
ABC_tran	PF00005.22	gi|297526670|ref|YP_003668694.1|	-	0.075	13.3	0.0	0.2	11.9	0.0	1.7	2	0	0	2	2	1	0	ABC	transporter
AAA_10	PF12846.2	gi|297526670|ref|YP_003668694.1|	-	0.094	12.1	0.0	0.18	11.2	0.0	1.5	1	0	0	1	1	1	0	AAA-like	domain
Sigma54_activat	PF00158.21	gi|297526670|ref|YP_003668694.1|	-	0.1	12.0	0.0	0.2	11.1	0.0	1.4	1	0	0	1	1	1	0	Sigma-54	interaction	domain
TrwB_AAD_bind	PF10412.4	gi|297526670|ref|YP_003668694.1|	-	0.11	11.1	0.0	0.24	10.0	0.0	1.5	1	0	0	1	1	1	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
NB-ARC	PF00931.17	gi|297526670|ref|YP_003668694.1|	-	0.11	11.3	0.0	0.8	8.5	0.0	2.0	2	0	0	2	2	2	0	NB-ARC	domain
MobB	PF03205.9	gi|297526670|ref|YP_003668694.1|	-	0.12	12.0	0.0	0.3	10.7	0.0	1.6	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
SNF2_N	PF00176.18	gi|297526670|ref|YP_003668694.1|	-	0.12	11.1	0.0	0.19	10.4	0.0	1.2	1	0	0	1	1	1	0	SNF2	family	N-terminal	domain
Sigma54_activ_2	PF14532.1	gi|297526670|ref|YP_003668694.1|	-	0.12	12.3	0.0	0.24	11.4	0.0	1.4	1	0	0	1	1	1	0	Sigma-54	interaction	domain
Metallophos	PF00149.23	gi|297526671|ref|YP_003668695.1|	-	3.5e-06	26.5	2.1	7.1e-06	25.5	1.5	1.5	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|297526671|ref|YP_003668695.1|	-	0.0013	18.5	0.0	0.0029	17.4	0.0	1.5	2	0	0	2	2	2	1	Calcineurin-like	phosphoesterase	superfamily	domain
DUF4064	PF13273.1	gi|297526671|ref|YP_003668695.1|	-	0.11	12.5	2.3	2.2	8.4	0.5	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4064)
cobW	PF02492.14	gi|297526672|ref|YP_003668696.1|	-	0.00019	20.9	0.0	0.00086	18.8	0.0	1.9	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
MobB	PF03205.9	gi|297526672|ref|YP_003668696.1|	-	0.0024	17.5	0.1	0.0072	16.0	0.0	1.8	2	0	0	2	2	2	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
CbiA	PF01656.18	gi|297526672|ref|YP_003668696.1|	-	0.0057	16.0	3.8	0.0078	15.6	1.0	2.2	2	0	0	2	2	2	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_17	PF13207.1	gi|297526672|ref|YP_003668696.1|	-	0.013	16.3	0.0	0.032	15.0	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
LpxK	PF02606.9	gi|297526672|ref|YP_003668696.1|	-	0.024	13.5	0.5	0.19	10.6	0.4	2.2	2	1	0	2	2	2	0	Tetraacyldisaccharide-1-P	4'-kinase
Zeta_toxin	PF06414.7	gi|297526672|ref|YP_003668696.1|	-	0.027	13.5	0.1	0.049	12.7	0.1	1.4	1	0	0	1	1	1	0	Zeta	toxin
AAA_26	PF13500.1	gi|297526672|ref|YP_003668696.1|	-	0.037	13.6	0.3	0.096	12.2	0.1	1.7	1	1	0	2	2	2	0	AAA	domain
AAA_31	PF13614.1	gi|297526672|ref|YP_003668696.1|	-	0.058	13.3	0.0	0.1	12.5	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
DapB_N	PF01113.15	gi|297526672|ref|YP_003668696.1|	-	0.099	12.5	0.4	1.7	8.6	0.0	2.8	4	0	0	4	4	4	0	Dihydrodipicolinate	reductase,	N-terminus
ArgK	PF03308.11	gi|297526672|ref|YP_003668696.1|	-	0.12	11.1	2.3	1.1	7.9	0.5	2.3	2	0	0	2	2	2	0	ArgK	protein
PPDK_N	PF01326.14	gi|297526673|ref|YP_003668697.1|	-	7.2e-101	337.5	0.0	1.2e-100	336.8	0.0	1.3	1	0	0	1	1	1	1	Pyruvate	phosphate	dikinase,	PEP/pyruvate	binding	domain
PEP-utilizers_C	PF02896.13	gi|297526673|ref|YP_003668697.1|	-	5.7e-90	301.1	0.0	8.4e-90	300.6	0.0	1.2	1	0	0	1	1	1	1	PEP-utilising	enzyme,	TIM	barrel	domain
PEP-utilizers	PF00391.18	gi|297526673|ref|YP_003668697.1|	-	3.8e-30	103.2	0.6	1.1e-29	101.8	0.4	1.8	1	0	0	1	1	1	1	PEP-utilising	enzyme,	mobile	domain
Epimerase_2	PF02350.14	gi|297526673|ref|YP_003668697.1|	-	0.14	10.8	0.0	0.27	9.9	0.0	1.4	1	0	0	1	1	1	0	UDP-N-acetylglucosamine	2-epimerase
CPSase_L_D2	PF02786.12	gi|297526674|ref|YP_003668698.1|	-	4.6e-68	228.6	0.1	6.5e-68	228.1	0.0	1.2	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
Biotin_carb_C	PF02785.14	gi|297526674|ref|YP_003668698.1|	-	2.1e-37	127.3	0.0	4.2e-37	126.3	0.0	1.6	1	0	0	1	1	1	1	Biotin	carboxylase	C-terminal	domain
CPSase_L_chain	PF00289.17	gi|297526674|ref|YP_003668698.1|	-	1.2e-29	102.6	0.0	2.4e-29	101.6	0.0	1.6	1	0	0	1	1	1	1	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
ATP-grasp_4	PF13535.1	gi|297526674|ref|YP_003668698.1|	-	6.1e-19	68.4	0.0	1.3e-18	67.4	0.0	1.5	1	0	0	1	1	1	1	ATP-grasp	domain
RimK	PF08443.6	gi|297526674|ref|YP_003668698.1|	-	8.9e-11	41.6	0.0	2.3e-10	40.2	0.0	1.7	1	1	0	1	1	1	1	RimK-like	ATP-grasp	domain
ATPgrasp_Ter	PF15632.1	gi|297526674|ref|YP_003668698.1|	-	9.2e-11	41.0	0.0	4.8e-10	38.6	0.0	1.9	1	1	0	1	1	1	1	ATP-grasp	in	the	biosynthetic	pathway	with	Ter	operon
ATP-grasp	PF02222.17	gi|297526674|ref|YP_003668698.1|	-	7.5e-10	38.4	0.0	1.6e-09	37.3	0.0	1.5	1	0	0	1	1	1	1	ATP-grasp	domain
Dala_Dala_lig_C	PF07478.8	gi|297526674|ref|YP_003668698.1|	-	5.3e-09	35.7	0.0	1.3e-08	34.5	0.0	1.7	1	1	0	1	1	1	1	D-ala	D-ala	ligase	C-terminus
GARS_A	PF01071.14	gi|297526674|ref|YP_003668698.1|	-	9.4e-06	25.3	0.0	1.6e-05	24.5	0.0	1.4	1	0	0	1	1	1	1	Phosphoribosylglycinamide	synthetase,	ATP-grasp	(A)	domain
ATP-grasp_3	PF02655.9	gi|297526674|ref|YP_003668698.1|	-	0.00082	19.2	0.0	0.0038	17.1	0.0	2.1	2	0	0	2	2	2	1	ATP-grasp	domain
GSH-S_ATP	PF02955.11	gi|297526674|ref|YP_003668698.1|	-	0.0081	15.3	0.2	0.03	13.4	0.0	2.0	2	0	0	2	2	2	1	Prokaryotic	glutathione	synthetase,	ATP-grasp	domain
ATP-grasp_5	PF13549.1	gi|297526674|ref|YP_003668698.1|	-	0.018	14.2	0.0	0.033	13.4	0.0	1.4	1	0	0	1	1	1	0	ATP-grasp	domain
ATP-grasp_2	PF08442.5	gi|297526674|ref|YP_003668698.1|	-	0.05	12.9	0.1	0.1	11.9	0.1	1.4	1	0	0	1	1	1	0	ATP-grasp	domain
Prok-JAB	PF14464.1	gi|297526675|ref|YP_003668699.1|	-	0.02	14.4	0.0	0.033	13.7	0.0	1.3	1	0	0	1	1	1	0	Prokaryotic	homologs	of	the	JAB	domain
Peptidase_M20	PF01546.23	gi|297526676|ref|YP_003668700.1|	-	2.9e-38	131.2	0.0	4.2e-38	130.7	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
M20_dimer	PF07687.9	gi|297526676|ref|YP_003668700.1|	-	1.4e-17	63.4	0.0	2.9e-17	62.4	0.0	1.6	1	0	0	1	1	1	1	Peptidase	dimerisation	domain
Peptidase_M28	PF04389.12	gi|297526676|ref|YP_003668700.1|	-	0.11	12.2	0.0	0.58	9.8	0.0	2.0	2	0	0	2	2	2	0	Peptidase	family	M28
THUMP	PF02926.12	gi|297526676|ref|YP_003668700.1|	-	0.12	12.2	0.6	2.2	8.1	0.1	2.3	2	0	0	2	2	2	0	THUMP	domain
Fer4_13	PF13370.1	gi|297526678|ref|YP_003668702.1|	-	3.8e-20	72.0	2.4	4.9e-20	71.6	1.6	1.1	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_15	PF13459.1	gi|297526678|ref|YP_003668702.1|	-	1.5e-17	63.8	3.5	1.8e-17	63.6	2.5	1.1	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_6	PF12837.2	gi|297526678|ref|YP_003668702.1|	-	0.00013	21.6	5.7	0.00059	19.5	1.5	2.4	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|297526678|ref|YP_003668702.1|	-	0.0012	19.0	1.1	0.0019	18.4	0.7	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|297526678|ref|YP_003668702.1|	-	0.0099	16.1	0.3	0.0099	16.1	0.2	2.4	2	1	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|297526678|ref|YP_003668702.1|	-	0.016	15.6	3.4	0.14	12.5	2.4	2.2	1	1	2	3	3	3	0	4Fe-4S	dicluster	domain
Fer4	PF00037.22	gi|297526678|ref|YP_003668702.1|	-	0.016	14.7	6.8	0.032	13.8	0.7	2.6	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|297526678|ref|YP_003668702.1|	-	0.047	13.5	3.3	0.12	12.1	2.3	1.8	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|297526678|ref|YP_003668702.1|	-	0.052	13.4	2.1	0.4	10.5	0.3	2.1	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|297526678|ref|YP_003668702.1|	-	0.35	10.9	1.9	1	9.4	1.3	1.8	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|297526678|ref|YP_003668702.1|	-	2.6	8.1	8.7	0.28	11.2	0.8	2.4	2	1	0	2	2	2	0	4Fe-4S	binding	domain
BPD_transp_2	PF02653.11	gi|297526680|ref|YP_003668704.1|	-	4e-30	104.6	39.1	5e-30	104.3	27.1	1.0	1	0	0	1	1	1	1	Branched-chain	amino	acid	transport	system	/	permease	component
TMEM141	PF15110.1	gi|297526680|ref|YP_003668704.1|	-	4.1	7.7	5.9	11	6.3	0.7	2.9	2	1	0	3	3	3	0	TMEM141	protein	family
BPD_transp_2	PF02653.11	gi|297526681|ref|YP_003668705.1|	-	1.2e-29	103.0	37.4	1.2e-29	103.0	25.9	1.9	2	0	0	2	2	2	1	Branched-chain	amino	acid	transport	system	/	permease	component
ABC_tran	PF00005.22	gi|297526682|ref|YP_003668706.1|	-	3e-42	144.1	0.1	1.4e-29	103.1	0.0	2.2	2	0	0	2	2	2	2	ABC	transporter
AAA_21	PF13304.1	gi|297526682|ref|YP_003668706.1|	-	1.8e-08	34.7	0.8	4.8e-06	26.7	0.1	2.6	2	1	0	2	2	2	1	AAA	domain
AAA_29	PF13555.1	gi|297526682|ref|YP_003668706.1|	-	0.001	18.5	0.2	0.0039	16.6	0.0	2.1	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
AAA_23	PF13476.1	gi|297526682|ref|YP_003668706.1|	-	0.0028	18.0	0.3	0.0061	16.9	0.2	1.7	1	1	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|297526682|ref|YP_003668706.1|	-	0.023	13.9	0.1	0.067	12.3	0.0	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF258
AAA_15	PF13175.1	gi|297526682|ref|YP_003668706.1|	-	0.032	13.2	0.0	2.3	7.1	0.0	2.3	1	1	0	2	2	2	0	AAA	ATPase	domain
UPF0079	PF02367.12	gi|297526682|ref|YP_003668706.1|	-	0.062	12.9	0.4	0.38	10.3	0.0	2.2	2	0	0	2	2	2	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_10	PF12846.2	gi|297526682|ref|YP_003668706.1|	-	0.21	11.0	0.7	7.2	5.9	0.0	3.1	4	0	0	4	4	4	0	AAA-like	domain
Bmp	PF02608.9	gi|297526683|ref|YP_003668707.1|	-	9.7e-34	116.4	2.3	1.2e-33	116.1	1.6	1.1	1	0	0	1	1	1	1	Basic	membrane	protein
DUF1450	PF07293.6	gi|297526683|ref|YP_003668707.1|	-	0.17	11.8	0.0	8.3	6.4	0.0	2.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1450)
DUF1122	PF06557.6	gi|297526685|ref|YP_003668709.1|	-	1.1e-05	24.6	0.1	2.3e-05	23.6	0.0	1.5	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF1122)
DUF4605	PF15378.1	gi|297526686|ref|YP_003668710.1|	-	0.09	12.4	0.0	0.17	11.5	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4605)
Cation_efflux	PF01545.16	gi|297526687|ref|YP_003668711.1|	-	5e-28	97.9	9.9	5.9e-28	97.7	6.9	1.0	1	0	0	1	1	1	1	Cation	efflux	family
DUF3275	PF11679.3	gi|297526687|ref|YP_003668711.1|	-	0.14	11.8	0.1	3	7.4	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3275)
Amidohydro_4	PF13147.1	gi|297526688|ref|YP_003668712.1|	-	1.4e-18	67.9	0.0	2.3e-18	67.2	0.0	1.4	1	1	0	1	1	1	1	Amidohydrolase
Amidohydro_1	PF01979.15	gi|297526688|ref|YP_003668712.1|	-	4.3e-14	52.9	0.0	8.4e-13	48.6	0.0	2.1	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|297526688|ref|YP_003668712.1|	-	9.7e-11	41.3	0.3	3.7e-10	39.4	0.1	2.1	2	0	0	2	2	2	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|297526688|ref|YP_003668712.1|	-	7.6e-07	28.6	0.0	0.00066	19.0	0.0	2.5	2	0	0	2	2	2	2	Amidohydrolase	family
TatD_DNase	PF01026.16	gi|297526688|ref|YP_003668712.1|	-	0.0011	18.1	0.1	0.0035	16.5	0.1	1.7	1	1	0	1	1	1	1	TatD	related	DNase
D-aminoacyl_C	PF07908.7	gi|297526688|ref|YP_003668712.1|	-	0.054	12.8	1.3	0.091	12.0	0.0	2.1	3	0	0	3	3	3	0	D-aminoacylase,	C-terminal	region
DuoxA	PF10204.4	gi|297526689|ref|YP_003668713.1|	-	0.13	11.3	4.4	0.055	12.5	0.4	2.0	1	1	1	2	2	2	0	Dual	oxidase	maturation	factor
DUF4064	PF13273.1	gi|297526689|ref|YP_003668713.1|	-	0.19	11.8	13.2	13	5.9	10.0	2.6	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4064)
DUF4131	PF13567.1	gi|297526689|ref|YP_003668713.1|	-	0.85	9.0	8.0	2.2	7.6	1.2	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4131)
Sdh_cyt	PF01127.17	gi|297526689|ref|YP_003668713.1|	-	1.2	8.9	6.0	0.25	11.1	0.8	1.9	2	0	0	2	2	2	0	Succinate	dehydrogenase/Fumarate	reductase	transmembrane	subunit
SpoIIIAC	PF06686.6	gi|297526689|ref|YP_003668713.1|	-	7.5	6.4	9.1	2.4	8.0	0.7	3.2	3	1	1	4	4	4	0	Stage	III	sporulation	protein	AC/AD	protein	family
UPF0047	PF01894.12	gi|297526690|ref|YP_003668714.1|	-	1.9e-11	43.7	0.0	2.9e-06	27.0	0.0	2.1	2	0	0	2	2	2	2	Uncharacterised	protein	family	UPF0047
DUF1939	PF09154.5	gi|297526690|ref|YP_003668714.1|	-	0.024	14.5	0.2	0.042	13.7	0.1	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1939)
UPF0047	PF01894.12	gi|297526691|ref|YP_003668715.1|	-	1.8e-09	37.4	0.2	2.3e-09	37.1	0.1	1.1	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0047
DUF4064	PF13273.1	gi|297526692|ref|YP_003668716.1|	-	1.4e-11	44.3	22.7	8.7e-11	41.8	12.7	2.2	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF4064)
Kinocilin	PF15033.1	gi|297526692|ref|YP_003668716.1|	-	3.2	7.2	6.0	5.5	6.5	4.1	1.4	1	0	0	1	1	1	0	Kinocilin	protein
ATG22	PF11700.3	gi|297526692|ref|YP_003668716.1|	-	3.9	5.8	14.0	3.7	5.9	9.2	1.3	1	1	0	1	1	1	0	Vacuole	effluxer	Atg22	like
IncA	PF04156.9	gi|297526692|ref|YP_003668716.1|	-	7.8	6.0	24.6	9.4	5.7	0.1	2.3	2	0	0	2	2	2	0	IncA	protein
FUSC-like	PF12805.2	gi|297526692|ref|YP_003668716.1|	-	9.4	5.0	8.9	12	4.7	6.1	1.1	1	0	0	1	1	1	0	FUSC-like	inner	membrane	protein	yccS
NTP_transferase	PF00483.18	gi|297526693|ref|YP_003668717.1|	-	1.1e-40	139.5	0.0	1.4e-40	139.1	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|297526693|ref|YP_003668717.1|	-	3e-11	43.6	0.0	3.9e-11	43.2	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep	PF00132.19	gi|297526693|ref|YP_003668717.1|	-	8.3e-05	21.9	8.0	8.4e-05	21.9	0.2	4.2	3	1	2	5	5	5	1	Bacterial	transferase	hexapeptide	(six	repeats)
Hexapep_2	PF14602.1	gi|297526693|ref|YP_003668717.1|	-	9e-05	21.9	0.1	0.00021	20.8	0.0	1.6	1	0	0	1	1	1	1	Hexapeptide	repeat	of	succinyl-transferase
CTP_transf_3	PF02348.14	gi|297526693|ref|YP_003668717.1|	-	0.087	12.4	0.0	0.15	11.6	0.0	1.3	1	0	0	1	1	1	0	Cytidylyltransferase
DUF321	PF03778.8	gi|297526693|ref|YP_003668717.1|	-	0.24	10.8	2.9	0.45	9.9	0.9	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF321)
PGM_PMM_II	PF02879.11	gi|297526694|ref|YP_003668718.1|	-	2.9e-15	56.4	0.0	1.2e-14	54.4	0.0	1.9	2	0	0	2	2	2	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_I	PF02878.11	gi|297526694|ref|YP_003668718.1|	-	1.3e-10	40.8	0.0	2.4e-10	40.0	0.0	1.3	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_III	PF02880.11	gi|297526694|ref|YP_003668718.1|	-	0.041	13.9	0.0	0.078	13.0	0.0	1.5	1	0	0	1	1	1	0	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
CMD	PF02627.15	gi|297526695|ref|YP_003668719.1|	-	4e-22	77.8	0.2	4.8e-22	77.5	0.1	1.1	1	0	0	1	1	1	1	Carboxymuconolactone	decarboxylase	family
SinI	PF08671.5	gi|297526695|ref|YP_003668719.1|	-	0.00012	21.3	1.0	0.0075	15.6	0.2	2.6	2	0	0	2	2	2	2	Anti-repressor	SinI
DegV	PF02645.11	gi|297526695|ref|YP_003668719.1|	-	0.042	12.9	0.0	0.056	12.5	0.0	1.2	1	0	0	1	1	1	0	Uncharacterised	protein,	DegV	family	COG1307
tRNA-synt_1	PF00133.17	gi|297526696|ref|YP_003668720.1|	-	1.6e-64	218.0	0.3	1.2e-63	215.0	0.2	2.3	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1g	PF09334.6	gi|297526696|ref|YP_003668720.1|	-	4.1e-24	84.9	5.7	9.3e-13	47.5	0.0	4.7	4	1	1	5	5	5	3	tRNA	synthetases	class	I	(M)
Anticodon_1	PF08264.8	gi|297526696|ref|YP_003668720.1|	-	8.3e-23	80.8	5.8	3.8e-22	78.6	4.0	2.1	1	1	0	1	1	1	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1e	PF01406.14	gi|297526696|ref|YP_003668720.1|	-	1.8e-10	40.4	1.1	1.3e-05	24.4	0.0	2.8	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(C)	catalytic	domain
tRNA-synt_1f	PF01921.13	gi|297526696|ref|YP_003668720.1|	-	1.1e-05	24.3	1.7	2.1e-05	23.3	0.0	2.2	2	0	0	2	2	2	1	tRNA	synthetases	class	I	(K)
tRNA-synt_1_2	PF13603.1	gi|297526696|ref|YP_003668720.1|	-	4.8e-05	22.7	0.0	0.0047	16.2	0.0	2.5	2	0	0	2	2	2	1	Leucyl-tRNA	synthetase,	Domain	2
tRNA-synt_1d	PF00750.14	gi|297526696|ref|YP_003668720.1|	-	0.00012	21.0	0.0	0.03	13.1	0.0	2.4	2	0	0	2	2	2	2	tRNA	synthetases	class	I	(R)
tRNA-synt_1b	PF00579.20	gi|297526696|ref|YP_003668720.1|	-	0.0082	15.2	0.0	0.017	14.2	0.0	1.4	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(W	and	Y)
CcmH	PF03918.9	gi|297526696|ref|YP_003668720.1|	-	0.06	12.3	0.1	0.12	11.4	0.1	1.3	1	0	0	1	1	1	0	Cytochrome	C	biogenesis	protein
DUF480	PF04337.7	gi|297526696|ref|YP_003668720.1|	-	0.22	11.3	0.0	0.49	10.2	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF480
ABC_tran	PF00005.22	gi|297526697|ref|YP_003668721.1|	-	2.3e-18	66.8	0.0	3e-18	66.4	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297526697|ref|YP_003668721.1|	-	5.7e-12	46.1	0.5	9.5e-11	42.1	0.3	2.0	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|297526697|ref|YP_003668721.1|	-	2e-09	37.0	0.1	1.2e-07	31.2	0.0	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|297526697|ref|YP_003668721.1|	-	0.00014	22.2	0.0	0.00027	21.3	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_13	PF13166.1	gi|297526697|ref|YP_003668721.1|	-	0.00033	19.2	0.5	0.022	13.2	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_10	PF12846.2	gi|297526697|ref|YP_003668721.1|	-	0.00049	19.6	0.1	0.66	9.3	0.0	2.2	2	0	0	2	2	2	2	AAA-like	domain
MutS_V	PF00488.16	gi|297526697|ref|YP_003668721.1|	-	0.00056	19.3	0.0	0.62	9.4	0.0	2.1	2	0	0	2	2	2	2	MutS	domain	V
AAA_25	PF13481.1	gi|297526697|ref|YP_003668721.1|	-	0.0016	17.8	0.0	0.0033	16.8	0.0	1.5	2	0	0	2	2	2	1	AAA	domain
AAA_29	PF13555.1	gi|297526697|ref|YP_003668721.1|	-	0.0057	16.1	0.1	0.011	15.2	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
DUF258	PF03193.11	gi|297526697|ref|YP_003668721.1|	-	0.012	14.7	0.0	0.021	14.0	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
Arch_ATPase	PF01637.13	gi|297526697|ref|YP_003668721.1|	-	0.018	14.7	0.0	0.025	14.2	0.0	1.3	1	0	0	1	1	1	0	Archaeal	ATPase
AAA_33	PF13671.1	gi|297526697|ref|YP_003668721.1|	-	0.026	14.3	0.0	0.054	13.3	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
AAA_14	PF13173.1	gi|297526697|ref|YP_003668721.1|	-	0.027	14.3	0.1	0.14	12.0	0.0	2.1	2	1	0	2	2	2	0	AAA	domain
AAA	PF00004.24	gi|297526697|ref|YP_003668721.1|	-	0.03	14.5	0.3	0.079	13.1	0.2	1.9	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_15	PF13175.1	gi|297526697|ref|YP_003668721.1|	-	0.037	13.0	0.0	1	8.3	0.0	2.1	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_22	PF13401.1	gi|297526697|ref|YP_003668721.1|	-	0.049	13.7	0.0	0.12	12.5	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_19	PF13245.1	gi|297526697|ref|YP_003668721.1|	-	0.07	12.8	0.1	0.38	10.5	0.0	2.0	2	0	0	2	2	2	0	Part	of	AAA	domain
NACHT	PF05729.7	gi|297526697|ref|YP_003668721.1|	-	0.082	12.5	0.2	0.23	11.0	0.1	1.7	2	0	0	2	2	2	0	NACHT	domain
AAA_24	PF13479.1	gi|297526697|ref|YP_003668721.1|	-	0.086	12.4	0.2	0.14	11.7	0.2	1.3	1	0	0	1	1	1	0	AAA	domain
PhoH	PF02562.11	gi|297526697|ref|YP_003668721.1|	-	0.12	11.6	0.0	0.24	10.5	0.0	1.5	1	0	0	1	1	1	0	PhoH-like	protein
AAA_16	PF13191.1	gi|297526697|ref|YP_003668721.1|	-	0.15	12.0	0.0	0.25	11.3	0.0	1.3	1	0	0	1	1	1	0	AAA	ATPase	domain
UPF0051	PF01458.12	gi|297526698|ref|YP_003668722.1|	-	8e-64	215.2	0.1	9.9e-64	214.9	0.1	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
UPF0051	PF01458.12	gi|297526699|ref|YP_003668723.1|	-	1.2e-36	126.2	0.0	1.5e-36	125.9	0.0	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	family	(UPF0051)
ABC_tran	PF00005.22	gi|297526700|ref|YP_003668724.1|	-	8.2e-24	84.4	0.0	2e-23	83.2	0.0	1.7	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|297526700|ref|YP_003668724.1|	-	1.2e-11	45.1	0.0	1.2e-07	31.9	0.0	2.4	1	1	1	2	2	2	2	AAA	domain
DUF4162	PF13732.1	gi|297526700|ref|YP_003668724.1|	-	2.9e-05	24.4	0.4	5.1e-05	23.6	0.3	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4162)
AAA_10	PF12846.2	gi|297526700|ref|YP_003668724.1|	-	0.001	18.5	0.0	0.046	13.1	0.0	2.3	2	0	0	2	2	2	1	AAA-like	domain
AAA_23	PF13476.1	gi|297526700|ref|YP_003668724.1|	-	0.017	15.4	0.2	0.017	15.4	0.1	2.3	2	1	0	2	2	2	0	AAA	domain
SMC_N	PF02463.14	gi|297526700|ref|YP_003668724.1|	-	0.034	13.3	0.3	1.3	8.1	0.0	2.5	3	0	0	3	3	3	0	RecF/RecN/SMC	N	terminal	domain
MobB	PF03205.9	gi|297526700|ref|YP_003668724.1|	-	0.11	12.2	1.1	0.51	10.0	0.1	2.3	2	1	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
SRP54	PF00448.17	gi|297526700|ref|YP_003668724.1|	-	0.12	11.8	0.2	0.46	9.9	0.0	2.0	2	1	1	3	3	3	0	SRP54-type	protein,	GTPase	domain
ABC2_membrane_2	PF12679.2	gi|297526701|ref|YP_003668725.1|	-	5.3e-19	68.1	10.2	1.9e-18	66.3	7.1	1.8	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
CarboxypepD_reg	PF13620.1	gi|297526701|ref|YP_003668725.1|	-	0.0013	18.7	0.0	0.0029	17.6	0.0	1.6	1	0	0	1	1	1	1	Carboxypeptidase	regulatory-like	domain
ABC2_membrane_5	PF13346.1	gi|297526701|ref|YP_003668725.1|	-	0.049	12.9	43.0	0.15	11.3	23.7	2.6	2	0	0	2	2	2	0	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|297526701|ref|YP_003668725.1|	-	0.07	12.2	54.9	0.47	9.5	38.1	2.1	1	1	0	1	1	1	0	ABC-2	family	transporter	protein
Dioxygenase_C	PF00775.16	gi|297526701|ref|YP_003668725.1|	-	0.2	10.8	0.0	0.37	10.0	0.0	1.3	1	0	0	1	1	1	0	Dioxygenase
SecG	PF03840.9	gi|297526701|ref|YP_003668725.1|	-	1.7	8.4	15.8	0.19	11.4	1.8	4.1	3	1	0	3	3	3	0	Preprotein	translocase	SecG	subunit
Glycos_transf_2	PF00535.21	gi|297526702|ref|YP_003668726.1|	-	3.4e-29	101.6	0.1	4.4e-29	101.3	0.1	1.1	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|297526702|ref|YP_003668726.1|	-	2e-10	40.9	0.0	2.4e-10	40.6	0.0	1.1	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.1	gi|297526702|ref|YP_003668726.1|	-	0.0048	17.1	0.0	0.014	15.6	0.0	1.8	2	0	0	2	2	2	1	Glycosyl	transferase	family	2
Glyco_transf_7N	PF13733.1	gi|297526702|ref|YP_003668726.1|	-	0.024	13.9	0.0	0.045	13.1	0.0	1.4	1	0	0	1	1	1	0	N-terminal	region	of	glycosyl	transferase	group	7
Galactosyl_T	PF01762.16	gi|297526702|ref|YP_003668726.1|	-	0.073	12.6	0.0	0.1	12.1	0.0	1.3	1	0	0	1	1	1	0	Galactosyltransferase
ABC_tran	PF00005.22	gi|297526703|ref|YP_003668727.1|	-	9.5e-35	119.8	0.0	1.6e-34	119.1	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297526703|ref|YP_003668727.1|	-	2.2e-11	44.2	0.7	2.4e-06	27.7	0.0	2.2	1	1	1	2	2	2	2	AAA	domain
AAA_29	PF13555.1	gi|297526703|ref|YP_003668727.1|	-	0.0012	18.3	0.1	0.0032	16.9	0.1	1.7	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
SMC_N	PF02463.14	gi|297526703|ref|YP_003668727.1|	-	0.0031	16.7	0.2	0.99	8.5	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_25	PF13481.1	gi|297526703|ref|YP_003668727.1|	-	0.0061	15.9	0.0	0.15	11.4	0.0	2.3	2	0	0	2	2	2	1	AAA	domain
AAA_15	PF13175.1	gi|297526703|ref|YP_003668727.1|	-	0.0066	15.5	0.0	0.03	13.3	0.0	1.9	1	1	1	2	2	2	1	AAA	ATPase	domain
TOBE	PF03459.12	gi|297526703|ref|YP_003668727.1|	-	0.021	14.9	0.0	0.3	11.2	0.0	2.8	2	0	0	2	2	2	0	TOBE	domain
TOBE_2	PF08402.5	gi|297526703|ref|YP_003668727.1|	-	0.046	13.7	0.0	0.11	12.5	0.0	1.7	1	0	0	1	1	1	0	TOBE	domain
DUF258	PF03193.11	gi|297526703|ref|YP_003668727.1|	-	0.054	12.6	0.0	0.093	11.9	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_16	PF13191.1	gi|297526703|ref|YP_003668727.1|	-	0.078	12.9	0.5	0.29	11.1	0.0	2.0	2	0	0	2	2	2	0	AAA	ATPase	domain
G-alpha	PF00503.15	gi|297526703|ref|YP_003668727.1|	-	0.083	11.5	0.0	0.11	11.1	0.0	1.2	1	0	0	1	1	1	0	G-protein	alpha	subunit
AAA_19	PF13245.1	gi|297526703|ref|YP_003668727.1|	-	0.097	12.4	0.0	0.33	10.7	0.0	1.9	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA	PF00004.24	gi|297526703|ref|YP_003668727.1|	-	0.11	12.7	0.1	0.61	10.2	0.1	2.3	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_17	PF13207.1	gi|297526703|ref|YP_003668727.1|	-	0.13	13.0	0.4	0.43	11.3	0.3	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_22	PF13401.1	gi|297526703|ref|YP_003668727.1|	-	0.18	11.9	2.0	0.35	10.9	0.1	2.2	2	1	0	2	2	2	0	AAA	domain
BPD_transp_1	PF00528.17	gi|297526704|ref|YP_003668728.1|	-	3.2e-08	33.2	19.7	3.2e-08	33.2	13.7	2.1	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.17	gi|297526705|ref|YP_003668729.1|	-	9.7e-14	51.2	15.1	9.7e-14	51.2	10.5	2.4	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
PMP22_Claudin	PF00822.15	gi|297526705|ref|YP_003668729.1|	-	0.052	13.1	0.6	0.052	13.1	0.4	3.1	4	0	0	4	4	4	0	PMP-22/EMP/MP20/Claudin	family
SBP_bac_1	PF01547.20	gi|297526706|ref|YP_003668730.1|	-	1.1e-26	94.2	7.5	4.3e-26	92.3	5.2	1.9	1	1	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
DUF2749	PF10907.3	gi|297526706|ref|YP_003668730.1|	-	1	9.2	2.6	2	8.3	1.8	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2749)
tRNA-synt_1f	PF01921.13	gi|297526708|ref|YP_003668732.1|	-	5.3e-94	314.8	0.6	7.1e-94	314.4	0.4	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(K)
TF_Zn_Ribbon	PF08271.7	gi|297526708|ref|YP_003668732.1|	-	0.088	12.1	1.3	0.29	10.4	0.9	1.8	1	1	0	1	1	1	0	TFIIB	zinc-binding
Zn_Tnp_IS1595	PF12760.2	gi|297526708|ref|YP_003668732.1|	-	0.13	12.1	0.3	0.26	11.1	0.2	1.5	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
DUF1028	PF06267.7	gi|297526709|ref|YP_003668733.1|	-	4.7e-53	179.4	0.0	5.3e-53	179.2	0.0	1.0	1	0	0	1	1	1	1	Family	of	unknown	function	(DUF1028)
RHH_1	PF01402.16	gi|297526710|ref|YP_003668734.1|	-	0.0032	17.2	0.0	0.015	15.1	0.0	2.2	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
Beta_propel	PF09826.4	gi|297526710|ref|YP_003668734.1|	-	0.021	13.1	0.4	0.028	12.7	0.3	1.1	1	0	0	1	1	1	0	Beta	propeller	domain
DUF1548	PF07579.6	gi|297526710|ref|YP_003668734.1|	-	0.047	13.8	0.1	0.086	12.9	0.0	1.4	1	1	0	1	1	1	0	Domain	of	Unknown	Function	(DUF1548)
GATase_6	PF13522.1	gi|297526711|ref|YP_003668735.1|	-	9.6e-09	35.2	0.0	2.4e-08	33.9	0.0	1.6	1	1	1	2	2	2	1	Glutamine	amidotransferase	domain
GATase_4	PF13230.1	gi|297526711|ref|YP_003668735.1|	-	9.9e-09	34.2	0.1	1.9e-08	33.3	0.1	1.4	1	1	0	1	1	1	1	Glutamine	amidotransferases	class-II
GATase_2	PF00310.16	gi|297526711|ref|YP_003668735.1|	-	8.4e-05	21.4	0.0	0.00012	20.8	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
DUF2262	PF10020.4	gi|297526712|ref|YP_003668736.1|	-	0.0036	17.5	1.0	0.0052	16.9	0.7	1.3	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2262)
Focal_AT	PF03623.8	gi|297526712|ref|YP_003668736.1|	-	0.15	11.5	2.9	0.31	10.5	1.4	2.1	1	1	0	1	1	1	0	Focal	adhesion	targeting	region
CaM_bdg_C0	PF10562.4	gi|297526712|ref|YP_003668736.1|	-	0.38	10.6	4.6	42	4.1	1.7	3.3	2	1	1	3	3	3	0	Calmodulin-binding	domain	C0	of	NMDA	receptor	NR1	subunit
Aminotran_1_2	PF00155.16	gi|297526713|ref|YP_003668737.1|	-	5.5e-74	249.2	0.0	6.2e-74	249.1	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
DegT_DnrJ_EryC1	PF01041.12	gi|297526713|ref|YP_003668737.1|	-	9e-09	34.8	0.0	1.4e-08	34.1	0.0	1.2	1	0	0	1	1	1	1	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Beta_elim_lyase	PF01212.16	gi|297526713|ref|YP_003668737.1|	-	7.8e-06	25.2	0.0	1.1e-05	24.7	0.0	1.2	1	0	0	1	1	1	1	Beta-eliminating	lyase
Aminotran_5	PF00266.14	gi|297526713|ref|YP_003668737.1|	-	1.2e-05	24.2	0.0	1.9e-05	23.5	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.15	gi|297526713|ref|YP_003668737.1|	-	0.00073	17.9	0.0	0.001	17.4	0.0	1.2	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
DUF377	PF04041.8	gi|297526714|ref|YP_003668738.1|	-	2.5e-58	197.2	4.1	2.9e-58	197.0	2.9	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF377)
DEAD	PF00270.24	gi|297526715|ref|YP_003668739.1|	-	8.3e-18	64.4	0.0	5.4e-17	61.7	0.0	2.2	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|297526715|ref|YP_003668739.1|	-	3.9e-13	49.0	0.0	1.1e-12	47.5	0.0	1.8	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|297526715|ref|YP_003668739.1|	-	0.00026	20.8	0.0	0.001	18.9	0.0	2.0	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
UvrD-helicase	PF00580.16	gi|297526715|ref|YP_003668739.1|	-	0.0011	18.3	2.4	0.01	15.1	0.0	2.4	2	0	0	2	2	2	1	UvrD/REP	helicase	N-terminal	domain
AAA_19	PF13245.1	gi|297526715|ref|YP_003668739.1|	-	0.22	11.3	0.0	0.53	10.0	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
FrhB_FdhB_N	PF04422.8	gi|297526716|ref|YP_003668740.1|	-	9.4e-06	25.4	0.0	1e-05	25.3	0.0	1.1	1	0	0	1	1	1	1	Coenzyme	F420	hydrogenase/dehydrogenase,	beta	subunit	N-term
Molybdopterin	PF00384.17	gi|297526718|ref|YP_003668742.1|	-	2.6e-82	276.8	0.0	3.3e-82	276.5	0.0	1.1	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase
Molydop_binding	PF01568.16	gi|297526718|ref|YP_003668742.1|	-	1.3e-24	86.1	0.0	3e-24	84.9	0.0	1.6	1	0	0	1	1	1	1	Molydopterin	dinucleotide	binding	domain
Molybdop_Fe4S4	PF04879.11	gi|297526718|ref|YP_003668742.1|	-	1.5e-15	56.7	0.3	2.8e-15	55.8	0.2	1.5	1	0	0	1	1	1	1	Molybdopterin	oxidoreductase	Fe4S4	domain
UPF0181	PF03701.9	gi|297526718|ref|YP_003668742.1|	-	0.2	10.9	0.1	0.38	10.0	0.1	1.4	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0181)
NTP_transf_3	PF12804.2	gi|297526719|ref|YP_003668743.1|	-	2e-21	76.7	0.0	2.5e-21	76.4	0.0	1.1	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Aldedh	PF00171.17	gi|297526720|ref|YP_003668744.1|	-	1.2e-118	396.3	0.0	1.4e-118	396.1	0.0	1.0	1	0	0	1	1	1	1	Aldehyde	dehydrogenase	family
LuxC	PF05893.9	gi|297526720|ref|YP_003668744.1|	-	6.1e-05	21.9	0.0	0.00082	18.1	0.0	2.4	1	1	0	1	1	1	1	Acyl-CoA	reductase	(LuxC)
Glycos_transf_1	PF00534.15	gi|297526721|ref|YP_003668745.1|	-	5e-23	81.3	0.0	9.9e-23	80.4	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|297526721|ref|YP_003668745.1|	-	1.7e-10	41.0	0.0	3.7e-10	39.9	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|297526721|ref|YP_003668745.1|	-	1.3e-07	31.7	0.0	2.7e-07	30.8	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Regulator_TrmB	PF11495.3	gi|297526722|ref|YP_003668746.1|	-	2.4e-25	88.8	0.7	4.5e-25	88.0	0.5	1.4	1	1	0	1	1	1	1	Archaeal	transcriptional	regulator	TrmB
TrmB	PF01978.14	gi|297526722|ref|YP_003668746.1|	-	8.7e-23	79.8	0.5	5.5e-22	77.2	0.1	2.5	3	0	0	3	3	3	1	Sugar-specific	transcriptional	regulator	TrmB
Rrf2	PF02082.15	gi|297526722|ref|YP_003668746.1|	-	0.0031	17.5	0.0	0.0088	16.1	0.0	1.8	1	0	0	1	1	1	1	Transcriptional	regulator
DUF2250	PF10007.4	gi|297526722|ref|YP_003668746.1|	-	0.021	14.7	0.4	0.24	11.3	0.0	2.8	3	0	0	3	3	3	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
PadR	PF03551.9	gi|297526722|ref|YP_003668746.1|	-	0.034	13.9	1.5	4.3	7.1	0.0	3.5	3	0	0	3	3	3	0	Transcriptional	regulator	PadR-like	family
HTH_9	PF08221.6	gi|297526722|ref|YP_003668746.1|	-	0.048	13.5	0.0	0.14	12.0	0.0	1.7	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
LexA_DNA_bind	PF01726.11	gi|297526722|ref|YP_003668746.1|	-	0.051	13.1	0.0	0.12	11.9	0.0	1.7	1	0	0	1	1	1	0	LexA	DNA	binding	domain
HTH_IclR	PF09339.5	gi|297526722|ref|YP_003668746.1|	-	0.058	12.9	0.0	0.11	12.1	0.0	1.4	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_20	PF12840.2	gi|297526722|ref|YP_003668746.1|	-	0.081	12.7	0.0	0.21	11.4	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
ABC_tran	PF00005.22	gi|297526723|ref|YP_003668747.1|	-	1.4e-35	122.5	0.0	2.1e-35	122.0	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297526723|ref|YP_003668747.1|	-	4.2e-12	46.6	0.1	3.1e-09	37.2	0.0	2.3	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|297526723|ref|YP_003668747.1|	-	2.4e-07	30.1	0.0	0.0011	18.1	0.0	2.1	2	0	0	2	2	2	2	AAA	ATPase	domain
TOBE_2	PF08402.5	gi|297526723|ref|YP_003668747.1|	-	7.2e-05	22.7	0.2	0.003	17.5	0.0	2.5	2	0	0	2	2	2	1	TOBE	domain
ABC_ATPase	PF09818.4	gi|297526723|ref|YP_003668747.1|	-	0.00038	19.1	0.4	0.15	10.5	0.0	2.8	2	1	0	2	2	2	1	Predicted	ATPase	of	the	ABC	class
SMC_N	PF02463.14	gi|297526723|ref|YP_003668747.1|	-	0.00058	19.1	0.1	0.0051	16.0	0.1	2.0	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_19	PF13245.1	gi|297526723|ref|YP_003668747.1|	-	0.0007	19.3	0.0	0.0025	17.5	0.0	1.9	1	0	0	1	1	1	1	Part	of	AAA	domain
Arch_ATPase	PF01637.13	gi|297526723|ref|YP_003668747.1|	-	0.00082	19.1	0.0	0.0014	18.4	0.0	1.5	1	0	0	1	1	1	1	Archaeal	ATPase
AAA_23	PF13476.1	gi|297526723|ref|YP_003668747.1|	-	0.00091	19.6	0.1	0.0019	18.5	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
SbcCD_C	PF13558.1	gi|297526723|ref|YP_003668747.1|	-	0.00094	19.0	0.1	0.0049	16.7	0.1	2.0	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_18	PF13238.1	gi|297526723|ref|YP_003668747.1|	-	0.001	19.3	0.0	0.0021	18.3	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|297526723|ref|YP_003668747.1|	-	0.0013	19.4	0.1	0.0034	18.1	0.1	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|297526723|ref|YP_003668747.1|	-	0.0018	17.7	0.0	0.0041	16.6	0.0	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.1	gi|297526723|ref|YP_003668747.1|	-	0.0022	18.0	0.1	0.004	17.1	0.1	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|297526723|ref|YP_003668747.1|	-	0.0024	18.0	0.7	0.019	15.0	0.4	2.4	2	1	0	2	2	1	1	AAA	domain
AAA_25	PF13481.1	gi|297526723|ref|YP_003668747.1|	-	0.0036	16.7	0.0	0.026	13.9	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_10	PF12846.2	gi|297526723|ref|YP_003668747.1|	-	0.0038	16.6	0.1	0.0095	15.3	0.0	1.6	2	0	0	2	2	2	1	AAA-like	domain
Miro	PF08477.8	gi|297526723|ref|YP_003668747.1|	-	0.0061	17.0	0.0	0.018	15.5	0.0	1.8	2	0	0	2	2	1	1	Miro-like	protein
DUF258	PF03193.11	gi|297526723|ref|YP_003668747.1|	-	0.0076	15.4	0.0	0.011	14.8	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
cobW	PF02492.14	gi|297526723|ref|YP_003668747.1|	-	0.015	14.7	0.0	0.026	13.9	0.0	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_28	PF13521.1	gi|297526723|ref|YP_003668747.1|	-	0.017	15.0	0.1	0.043	13.7	0.1	1.7	1	0	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|297526723|ref|YP_003668747.1|	-	0.018	15.2	0.1	0.4	10.8	0.0	2.2	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
NACHT	PF05729.7	gi|297526723|ref|YP_003668747.1|	-	0.021	14.4	0.0	0.055	13.1	0.0	1.6	2	0	0	2	2	2	0	NACHT	domain
T2SE	PF00437.15	gi|297526723|ref|YP_003668747.1|	-	0.063	12.1	0.0	0.12	11.2	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
KaiC	PF06745.8	gi|297526723|ref|YP_003668747.1|	-	0.063	12.3	0.2	3.9	6.5	0.0	2.2	2	0	0	2	2	2	0	KaiC
MobB	PF03205.9	gi|297526723|ref|YP_003668747.1|	-	0.064	12.9	0.1	0.13	11.9	0.1	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_30	PF13604.1	gi|297526723|ref|YP_003668747.1|	-	0.11	12.0	0.1	0.31	10.5	0.0	1.7	2	0	0	2	2	2	0	AAA	domain
AAA_24	PF13479.1	gi|297526723|ref|YP_003668747.1|	-	0.12	11.9	0.8	0.29	10.7	0.1	1.9	2	0	0	2	2	2	0	AAA	domain
AAA_33	PF13671.1	gi|297526723|ref|YP_003668747.1|	-	0.12	12.2	0.2	0.24	11.2	0.0	1.6	2	0	0	2	2	1	0	AAA	domain
PEPCK_ATP	PF01293.15	gi|297526723|ref|YP_003668747.1|	-	0.12	10.8	0.0	0.2	10.1	0.0	1.2	1	0	0	1	1	1	0	Phosphoenolpyruvate	carboxykinase
DLIC	PF05783.6	gi|297526723|ref|YP_003668747.1|	-	0.16	10.5	0.0	0.23	10.0	0.0	1.1	1	0	0	1	1	1	0	Dynein	light	intermediate	chain	(DLIC)
BPD_transp_1	PF00528.17	gi|297526724|ref|YP_003668748.1|	-	1.1e-21	77.1	14.7	1.1e-21	77.1	10.2	2.1	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.17	gi|297526725|ref|YP_003668749.1|	-	1.8e-16	60.1	23.8	1.8e-16	60.1	16.5	2.1	2	0	0	2	2	2	2	Binding-protein-dependent	transport	system	inner	membrane	component
DUF3353	PF11833.3	gi|297526725|ref|YP_003668749.1|	-	0.21	11.0	1.8	0.51	9.7	1.2	1.7	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3353)
SBP_bac_1	PF01547.20	gi|297526726|ref|YP_003668750.1|	-	1.5e-41	143.2	7.1	1.5e-41	143.2	4.9	1.9	2	0	0	2	2	2	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_8	PF13416.1	gi|297526726|ref|YP_003668750.1|	-	7.9e-27	94.7	0.3	7.9e-27	94.7	0.2	1.9	1	1	1	2	2	2	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_6	PF13343.1	gi|297526726|ref|YP_003668750.1|	-	0.0049	16.2	0.1	0.014	14.7	0.0	1.8	2	0	0	2	2	2	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_11	PF13531.1	gi|297526726|ref|YP_003668750.1|	-	0.068	12.7	0.0	6.3	6.3	0.0	2.4	2	0	0	2	2	2	0	Bacterial	extracellular	solute-binding	protein
DapB_N	PF01113.15	gi|297526727|ref|YP_003668751.1|	-	2.3e-10	40.4	0.1	4.3e-10	39.5	0.1	1.4	1	0	0	1	1	1	1	Dihydrodipicolinate	reductase,	N-terminus
F420_oxidored	PF03807.12	gi|297526727|ref|YP_003668751.1|	-	0.00016	22.0	0.1	0.00094	19.5	0.0	2.3	2	0	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
Gp_dh_N	PF00044.19	gi|297526727|ref|YP_003668751.1|	-	0.0015	18.5	0.8	0.0015	18.5	0.6	1.9	2	0	0	2	2	2	1	Glyceraldehyde	3-phosphate	dehydrogenase,	NAD	binding	domain
GFO_IDH_MocA	PF01408.17	gi|297526727|ref|YP_003668751.1|	-	0.0042	17.6	0.0	0.0081	16.6	0.0	1.5	1	0	0	1	1	1	1	Oxidoreductase	family,	NAD-binding	Rossmann	fold
CoA_binding	PF02629.14	gi|297526727|ref|YP_003668751.1|	-	0.0075	16.7	0.0	0.018	15.5	0.0	1.6	1	0	0	1	1	1	1	CoA	binding	domain
2-Hacid_dh_C	PF02826.14	gi|297526727|ref|YP_003668751.1|	-	0.051	12.7	1.0	0.093	11.8	0.1	1.9	2	0	0	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
PALP	PF00291.20	gi|297526728|ref|YP_003668752.1|	-	6.1e-74	248.9	0.0	7.2e-74	248.7	0.0	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
Na_H_Exchanger	PF00999.16	gi|297526730|ref|YP_003668754.1|	-	5.6e-58	196.2	52.1	6.7e-58	196.0	36.1	1.0	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
HAD_2	PF13419.1	gi|297526731|ref|YP_003668755.1|	-	1.4e-15	57.9	0.0	1.7e-15	57.6	0.0	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|297526731|ref|YP_003668755.1|	-	3e-05	23.6	0.0	5.1e-05	22.8	0.0	1.4	1	0	0	1	1	1	1	HAD-hyrolase-like
Hydrolase	PF00702.21	gi|297526731|ref|YP_003668755.1|	-	0.00014	22.3	0.1	0.00068	20.1	0.1	1.9	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
5_nucleotid	PF05761.9	gi|297526731|ref|YP_003668755.1|	-	0.00021	19.9	0.0	0.00051	18.6	0.0	1.6	2	0	0	2	2	2	1	5'	nucleotidase	family
HTH_15	PF12324.3	gi|297526731|ref|YP_003668755.1|	-	0.096	12.3	0.0	2.7	7.7	0.0	2.6	3	0	0	3	3	3	0	Helix-turn-helix	domain	of	alkylmercury	lyase
DUF763	PF05559.6	gi|297526732|ref|YP_003668756.1|	-	5.3e-123	410.0	0.0	6.5e-123	409.7	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF763)
HHH_5	PF14520.1	gi|297526732|ref|YP_003668756.1|	-	0.022	14.9	1.3	0.48	10.6	0.4	3.1	2	1	0	2	2	2	0	Helix-hairpin-helix	domain
ATP-synt	PF00231.14	gi|297526732|ref|YP_003668756.1|	-	0.062	12.6	0.0	0.78	9.0	0.0	2.1	2	0	0	2	2	2	0	ATP	synthase
AAA_23	PF13476.1	gi|297526734|ref|YP_003668758.1|	-	3.3e-14	53.6	47.5	3.3e-14	53.6	32.9	6.9	2	1	2	4	4	2	1	AAA	domain
AAA_13	PF13166.1	gi|297526734|ref|YP_003668758.1|	-	7.7e-10	37.8	86.7	0.0082	14.6	10.9	4.7	2	1	2	4	4	4	4	AAA	domain
AAA_21	PF13304.1	gi|297526734|ref|YP_003668758.1|	-	1.1e-09	38.7	22.8	3.7e-08	33.6	2.3	4.9	1	1	2	4	4	3	2	AAA	domain
SMC_N	PF02463.14	gi|297526734|ref|YP_003668758.1|	-	1.1e-05	24.8	0.0	1.1e-05	24.8	0.0	2.9	2	1	0	2	2	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|297526734|ref|YP_003668758.1|	-	1.1e-05	24.8	0.0	2.1e-05	23.9	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
DUF812	PF05667.6	gi|297526734|ref|YP_003668758.1|	-	0.0004	19.0	12.0	0.0004	19.0	8.3	3.8	3	1	0	3	3	2	2	Protein	of	unknown	function	(DUF812)
BRE1	PF08647.6	gi|297526734|ref|YP_003668758.1|	-	0.00066	19.5	20.6	0.00066	19.5	14.3	5.5	4	2	1	5	5	3	1	BRE1	E3	ubiquitin	ligase
AAA_25	PF13481.1	gi|297526734|ref|YP_003668758.1|	-	0.0007	19.0	0.0	0.0024	17.3	0.0	1.9	1	0	0	1	1	1	1	AAA	domain
Laminin_II	PF06009.7	gi|297526734|ref|YP_003668758.1|	-	0.0016	18.2	2.4	0.0016	18.2	1.7	5.2	3	2	2	5	5	5	2	Laminin	Domain	II
SbcCD_C	PF13558.1	gi|297526734|ref|YP_003668758.1|	-	0.0017	18.2	0.0	0.0041	17.0	0.0	1.7	1	0	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_22	PF13401.1	gi|297526734|ref|YP_003668758.1|	-	0.006	16.7	10.2	0.067	13.3	0.0	4.6	4	0	0	4	4	4	1	AAA	domain
Fib_alpha	PF08702.5	gi|297526734|ref|YP_003668758.1|	-	0.0061	16.6	8.9	0.0061	16.6	6.2	5.2	3	2	3	6	6	6	1	Fibrinogen	alpha/beta	chain	family
IncA	PF04156.9	gi|297526734|ref|YP_003668758.1|	-	0.014	15.0	94.7	0.091	12.3	19.0	4.5	1	1	3	4	4	4	0	IncA	protein
Laminin_I	PF06008.9	gi|297526734|ref|YP_003668758.1|	-	0.029	13.7	67.4	0.07	12.4	6.4	3.7	2	1	1	3	3	3	0	Laminin	Domain	I
AAA_19	PF13245.1	gi|297526734|ref|YP_003668758.1|	-	0.047	13.4	0.0	0.1	12.3	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
Reo_sigmaC	PF04582.7	gi|297526734|ref|YP_003668758.1|	-	0.13	11.3	9.3	5.1	6.1	0.1	3.3	2	1	1	3	3	3	0	Reovirus	sigma	C	capsid	protein
LURAP	PF14854.1	gi|297526734|ref|YP_003668758.1|	-	0.2	11.3	13.3	1.6	8.4	2.5	3.3	2	2	0	2	2	2	0	Leucine	rich	adaptor	protein
Spc7	PF08317.6	gi|297526734|ref|YP_003668758.1|	-	0.29	9.7	99.1	0.25	9.9	20.3	4.4	1	1	3	4	4	4	0	Spc7	kinetochore	protein
AAA_16	PF13191.1	gi|297526734|ref|YP_003668758.1|	-	0.69	9.8	0.0	0.69	9.8	0.0	3.0	5	0	0	5	5	3	0	AAA	ATPase	domain
APG6	PF04111.7	gi|297526734|ref|YP_003668758.1|	-	0.72	8.8	92.1	0.082	11.9	15.5	4.4	2	1	2	4	4	4	0	Autophagy	protein	Apg6
ABC_tran	PF00005.22	gi|297526734|ref|YP_003668758.1|	-	0.78	10.0	0.0	0.78	10.0	0.0	6.3	2	1	1	3	3	1	0	ABC	transporter
Miro	PF08477.8	gi|297526734|ref|YP_003668758.1|	-	0.84	10.1	0.0	0.84	10.1	0.0	4.0	4	1	0	4	4	3	0	Miro-like	protein
DUF948	PF06103.6	gi|297526734|ref|YP_003668758.1|	-	1.6	8.6	37.9	0.19	11.5	1.9	5.4	4	1	1	5	5	5	0	Bacterial	protein	of	unknown	function	(DUF948)
HOOK	PF05622.7	gi|297526734|ref|YP_003668758.1|	-	2	6.1	80.3	0.32	8.7	37.4	2.4	2	1	0	2	2	2	0	HOOK	protein
Tropomyosin	PF00261.15	gi|297526734|ref|YP_003668758.1|	-	7.6	5.5	86.6	2	7.4	17.8	4.8	4	1	1	5	5	5	0	Tropomyosin
AAA_10	PF12846.2	gi|297526735|ref|YP_003668759.1|	-	3.9e-15	56.0	0.1	5.7e-14	52.2	0.1	2.3	1	1	0	1	1	1	1	AAA-like	domain
DUF87	PF01935.12	gi|297526735|ref|YP_003668759.1|	-	9.7e-14	51.7	1.3	2.7e-12	47.0	0.0	2.4	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF87
FtsK_SpoIIIE	PF01580.13	gi|297526735|ref|YP_003668759.1|	-	5.5e-05	22.7	0.0	0.00084	18.8	0.0	2.3	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
TrwB_AAD_bind	PF10412.4	gi|297526735|ref|YP_003668759.1|	-	0.00054	18.6	0.0	0.01	14.5	0.0	2.2	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
Zeta_toxin	PF06414.7	gi|297526735|ref|YP_003668759.1|	-	0.014	14.5	0.0	0.026	13.6	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
NACHT	PF05729.7	gi|297526735|ref|YP_003668759.1|	-	0.016	14.8	0.1	0.032	13.9	0.0	1.5	1	0	0	1	1	1	0	NACHT	domain
T2SE	PF00437.15	gi|297526735|ref|YP_003668759.1|	-	0.021	13.7	0.0	0.033	13.0	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_25	PF13481.1	gi|297526735|ref|YP_003668759.1|	-	0.08	12.3	0.0	0.15	11.4	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
DEAD	PF00270.24	gi|297526735|ref|YP_003668759.1|	-	0.081	12.4	0.0	0.14	11.6	0.0	1.4	1	0	0	1	1	1	0	DEAD/DEAH	box	helicase
Zot	PF05707.7	gi|297526735|ref|YP_003668759.1|	-	0.12	11.8	0.1	2.7	7.4	0.0	2.4	2	1	0	2	2	2	0	Zonular	occludens	toxin	(Zot)
Peptidase_M13_N	PF05649.8	gi|297526736|ref|YP_003668760.1|	-	0.13	11.3	0.0	0.24	10.4	0.0	1.6	1	1	0	1	1	1	0	Peptidase	family	M13
Metallophos_2	PF12850.2	gi|297526737|ref|YP_003668761.1|	-	1.7e-09	37.7	0.0	5.8e-09	35.9	0.0	1.9	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos	PF00149.23	gi|297526737|ref|YP_003668761.1|	-	3.5e-09	36.3	0.1	7.1e-09	35.3	0.0	1.6	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
dCMP_cyt_deam_1	PF00383.17	gi|297526738|ref|YP_003668762.1|	-	3.3e-17	61.9	0.1	4.3e-17	61.6	0.1	1.1	1	0	0	1	1	1	1	Cytidine	and	deoxycytidylate	deaminase	zinc-binding	region
dCMP_cyt_deam_2	PF08211.6	gi|297526738|ref|YP_003668762.1|	-	1.2e-09	38.1	0.1	1.8e-09	37.6	0.1	1.2	1	0	0	1	1	1	1	Cytidine	and	deoxycytidylate	deaminase	zinc-binding	region
LmjF365940-deam	PF14421.1	gi|297526738|ref|YP_003668762.1|	-	2.7e-05	23.6	1.3	0.0083	15.5	0.1	2.1	1	1	1	2	2	2	2	A	distinct	subfamily	of	CDD/CDA-like	deaminases
YwqJ-deaminase	PF14431.1	gi|297526738|ref|YP_003668762.1|	-	0.097	12.5	0.3	1.2	9.0	0.2	2.4	1	1	1	2	2	2	0	YwqJ-like	deaminase
tRNA-synt_1	PF00133.17	gi|297526739|ref|YP_003668763.1|	-	1e-181	605.0	0.1	1.6e-181	604.4	0.1	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(I,	L,	M	and	V)
Anticodon_1	PF08264.8	gi|297526739|ref|YP_003668763.1|	-	1.2e-38	132.2	2.1	1.2e-38	132.2	1.4	1.8	2	0	0	2	2	2	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1g	PF09334.6	gi|297526739|ref|YP_003668763.1|	-	3.4e-22	78.6	0.3	3.4e-07	29.2	0.0	4.1	3	1	0	3	3	3	3	tRNA	synthetases	class	I	(M)
tRNA-synt_1_2	PF13603.1	gi|297526739|ref|YP_003668763.1|	-	0.00022	20.5	0.0	0.00074	18.8	0.0	1.9	1	0	0	1	1	1	1	Leucyl-tRNA	synthetase,	Domain	2
Zn-ribbon_8	PF09723.5	gi|297526739|ref|YP_003668763.1|	-	0.33	10.9	1.0	1.1	9.2	0.1	2.3	2	0	0	2	2	2	0	Zinc	ribbon	domain
ABC_tran	PF00005.22	gi|297526740|ref|YP_003668764.1|	-	2.5e-26	92.5	0.0	3.8e-26	92.0	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297526740|ref|YP_003668764.1|	-	5.7e-15	56.0	2.8	2.1e-10	41.0	0.0	2.7	2	1	0	3	3	3	2	AAA	domain
AAA_15	PF13175.1	gi|297526740|ref|YP_003668764.1|	-	1.2e-06	27.9	0.0	6.4e-05	22.1	0.0	2.3	1	1	1	2	2	2	1	AAA	ATPase	domain
DUF4162	PF13732.1	gi|297526740|ref|YP_003668764.1|	-	4.1e-05	24.0	0.2	4.1e-05	24.0	0.1	1.7	2	0	0	2	2	1	1	Domain	of	unknown	function	(DUF4162)
AAA_29	PF13555.1	gi|297526740|ref|YP_003668764.1|	-	0.00012	21.5	0.0	0.00023	20.6	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_19	PF13245.1	gi|297526740|ref|YP_003668764.1|	-	0.0085	15.8	0.1	0.044	13.5	0.0	2.1	2	0	0	2	2	2	1	Part	of	AAA	domain
MukB	PF04310.7	gi|297526740|ref|YP_003668764.1|	-	0.012	14.9	0.0	0.035	13.4	0.0	1.7	2	1	0	2	2	2	0	MukB	N-terminal
AAA_23	PF13476.1	gi|297526740|ref|YP_003668764.1|	-	0.013	15.7	0.6	0.032	14.5	0.4	1.6	1	1	0	1	1	1	0	AAA	domain
Rad17	PF03215.10	gi|297526740|ref|YP_003668764.1|	-	0.016	13.9	0.0	0.023	13.4	0.0	1.1	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
UPF0079	PF02367.12	gi|297526740|ref|YP_003668764.1|	-	0.029	14.0	0.0	0.063	12.9	0.0	1.5	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
SMC_N	PF02463.14	gi|297526740|ref|YP_003668764.1|	-	0.04	13.1	0.0	8.3	5.5	0.0	2.2	2	0	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
AAA_16	PF13191.1	gi|297526740|ref|YP_003668764.1|	-	0.049	13.6	0.0	0.12	12.4	0.0	1.6	1	1	0	1	1	1	0	AAA	ATPase	domain
AAA	PF00004.24	gi|297526740|ref|YP_003668764.1|	-	0.05	13.8	0.2	0.2	11.8	0.1	2.1	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
IspD	PF01128.14	gi|297526740|ref|YP_003668764.1|	-	0.056	12.9	0.1	0.12	11.8	0.0	1.5	2	0	0	2	2	2	0	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
AAA_17	PF13207.1	gi|297526740|ref|YP_003668764.1|	-	0.074	13.8	0.7	0.21	12.4	0.4	1.9	1	1	0	1	1	1	0	AAA	domain
ACT_5	PF13710.1	gi|297526740|ref|YP_003668764.1|	-	0.12	12.1	0.0	0.43	10.4	0.0	1.9	2	0	0	2	2	2	0	ACT	domain
Ferric_reduct	PF01794.14	gi|297526741|ref|YP_003668765.1|	-	2	8.5	12.5	0.92	9.6	0.1	2.5	2	1	0	2	2	2	0	Ferric	reductase	like	transmembrane	component
DUF3464	PF11947.3	gi|297526741|ref|YP_003668765.1|	-	7.6	5.9	6.2	11	5.4	0.8	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3464)
HD	PF01966.17	gi|297526744|ref|YP_003668768.1|	-	2.1e-10	40.6	0.1	7.4e-10	38.8	0.1	2.0	1	0	0	1	1	1	1	HD	domain
Ist1	PF03398.9	gi|297526744|ref|YP_003668768.1|	-	0.0025	17.2	0.0	0.0054	16.1	0.0	1.5	1	0	0	1	1	1	1	Regulator	of	Vps4	activity	in	the	MVB	pathway
MS_channel	PF00924.13	gi|297526745|ref|YP_003668769.1|	-	1.3e-50	171.6	2.6	1.3e-50	171.6	1.8	1.4	2	0	0	2	2	2	1	Mechanosensitive	ion	channel
TM_helix	PF05552.7	gi|297526745|ref|YP_003668769.1|	-	0.0001	21.8	5.0	0.0001	21.8	3.5	2.3	1	1	1	2	2	2	1	Conserved	TM	helix
Colicin_V	PF02674.11	gi|297526745|ref|YP_003668769.1|	-	0.034	14.0	13.6	0.055	13.3	8.6	1.8	1	1	1	2	2	2	0	Colicin	V	production	protein
PrgI	PF12666.2	gi|297526745|ref|YP_003668769.1|	-	2	8.6	9.4	0.99	9.5	3.0	2.4	2	0	0	2	2	2	0	PrgI	family	protein
FtsX	PF02687.16	gi|297526745|ref|YP_003668769.1|	-	2.5	7.8	15.3	2.2	8.0	5.9	2.2	1	1	1	2	2	2	0	FtsX-like	permease	family
Sigma_reg_N	PF13800.1	gi|297526747|ref|YP_003668771.1|	-	0.26	11.3	4.0	0.54	10.3	2.8	1.6	1	0	0	1	1	1	0	Sigma	factor	regulator	N-terminal
zf-ribbon_3	PF13248.1	gi|297526748|ref|YP_003668772.1|	-	4.8e-05	22.4	3.3	0.036	13.2	0.3	2.2	2	0	0	2	2	2	2	zinc-ribbon	domain
zf-H2C2_2	PF13465.1	gi|297526748|ref|YP_003668772.1|	-	5.7e-05	23.1	0.9	0.26	11.6	0.1	2.4	2	0	0	2	2	2	2	Zinc-finger	double	domain
zinc_ribbon_2	PF13240.1	gi|297526748|ref|YP_003668772.1|	-	0.00025	20.4	2.6	0.37	10.3	0.4	2.2	2	0	0	2	2	2	2	zinc-ribbon	domain
CpXC	PF14353.1	gi|297526748|ref|YP_003668772.1|	-	0.0005	20.0	0.1	0.00085	19.2	0.1	1.5	1	1	0	1	1	1	1	CpXC	protein
zf-RING_3	PF14369.1	gi|297526748|ref|YP_003668772.1|	-	0.00079	19.3	1.1	0.049	13.6	0.1	2.2	2	0	0	2	2	2	1	zinc-finger
Zn_Tnp_IS1595	PF12760.2	gi|297526748|ref|YP_003668772.1|	-	0.0014	18.3	0.2	0.72	9.7	0.0	2.2	2	0	0	2	2	2	1	Transposase	zinc-ribbon	domain
zinc_ribbon_5	PF13719.1	gi|297526748|ref|YP_003668772.1|	-	0.0019	17.7	0.3	1.2	8.7	0.0	2.3	2	0	0	2	2	2	2	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|297526748|ref|YP_003668772.1|	-	0.0029	17.2	0.4	1.7	8.4	0.0	2.3	2	0	0	2	2	2	1	zinc-ribbon	domain
DZR	PF12773.2	gi|297526748|ref|YP_003668772.1|	-	0.0034	17.1	0.1	1.9	8.3	0.0	2.1	2	0	0	2	2	2	1	Double	zinc	ribbon
zf-C2HC_2	PF13913.1	gi|297526748|ref|YP_003668772.1|	-	0.0047	16.5	7.7	0.019	14.6	0.3	2.4	2	0	0	2	2	2	1	zinc-finger	of	a	C2HC-type
UPF0547	PF10571.4	gi|297526748|ref|YP_003668772.1|	-	0.0047	16.5	2.1	0.24	11.1	0.1	2.3	2	0	0	2	2	2	1	Uncharacterised	protein	family	UPF0547
zf-C2H2_4	PF13894.1	gi|297526748|ref|YP_003668772.1|	-	0.0057	16.9	0.5	4.2	7.9	0.0	2.3	2	0	0	2	2	2	0	C2H2-type	zinc	finger
Lar_restr_allev	PF14354.1	gi|297526748|ref|YP_003668772.1|	-	0.0063	16.7	0.8	0.12	12.7	0.6	2.0	1	1	0	1	1	1	1	Restriction	alleviation	protein	Lar
zf-Di19	PF05605.7	gi|297526748|ref|YP_003668772.1|	-	0.0084	16.2	1.1	0.93	9.6	0.2	2.2	2	0	0	2	2	2	1	Drought	induced	19	protein	(Di19),	zinc-binding
zf-ISL3	PF14690.1	gi|297526748|ref|YP_003668772.1|	-	0.011	15.7	0.4	5	7.2	0.0	2.2	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
FYDLN_acid	PF09538.5	gi|297526748|ref|YP_003668772.1|	-	0.014	15.9	0.3	1.8	9.1	0.0	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(FYDLN_acid)
Rad50_zn_hook	PF04423.9	gi|297526748|ref|YP_003668772.1|	-	0.018	14.5	1.3	0.23	10.9	0.1	2.1	2	0	0	2	2	2	0	Rad50	zinc	hook	motif
Zn-ribbon_8	PF09723.5	gi|297526748|ref|YP_003668772.1|	-	0.02	14.8	0.7	2	8.4	0.1	2.3	2	0	0	2	2	2	0	Zinc	ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|297526748|ref|YP_003668772.1|	-	0.026	13.8	2.0	1.9	7.8	0.1	2.3	2	0	0	2	2	2	0	TFIIB	zinc-binding
Rubredoxin	PF00301.15	gi|297526748|ref|YP_003668772.1|	-	0.032	14.0	3.1	0.59	10.0	0.3	2.2	2	0	0	2	2	2	0	Rubredoxin
zf-C2H2	PF00096.21	gi|297526748|ref|YP_003668772.1|	-	0.04	14.2	3.2	3.6	8.1	0.2	2.4	2	0	0	2	2	2	0	Zinc	finger,	C2H2	type
zf-CHCC	PF10276.4	gi|297526748|ref|YP_003668772.1|	-	0.046	13.5	2.3	1.5	8.7	0.5	2.3	2	0	0	2	2	2	0	Zinc-finger	domain
DUF164	PF02591.10	gi|297526748|ref|YP_003668772.1|	-	0.048	13.4	1.7	0.94	9.3	0.1	2.3	2	0	0	2	2	2	0	Putative	zinc	ribbon	domain
DUF2180	PF09947.4	gi|297526748|ref|YP_003668772.1|	-	0.058	13.1	0.0	0.81	9.4	0.0	2.0	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2180)
DUF723	PF05265.8	gi|297526748|ref|YP_003668772.1|	-	0.061	13.1	0.6	0.4	10.5	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF723)
DUF2225	PF09986.4	gi|297526748|ref|YP_003668772.1|	-	0.062	12.7	1.5	0.99	8.8	1.0	2.0	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2225)
HypA	PF01155.14	gi|297526748|ref|YP_003668772.1|	-	0.065	12.9	0.1	0.13	11.9	0.0	1.4	1	1	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zf-C4_Topoisom	PF01396.14	gi|297526748|ref|YP_003668772.1|	-	0.079	12.4	2.5	2.4	7.7	0.1	2.3	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
zf-CCHC_5	PF14787.1	gi|297526748|ref|YP_003668772.1|	-	0.096	12.1	0.5	0.096	12.1	0.4	2.0	2	0	0	2	2	2	0	GAG-polyprotein	viral	zinc-finger
Prok-RING_1	PF14446.1	gi|297526748|ref|YP_003668772.1|	-	0.12	12.1	0.7	3.1	7.5	0.0	2.1	2	0	0	2	2	2	0	Prokaryotic	RING	finger	family	1
Sgf11	PF08209.6	gi|297526748|ref|YP_003668772.1|	-	0.13	11.5	2.8	1.1	8.6	0.2	2.1	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
DNA_RNApol_7kD	PF03604.8	gi|297526748|ref|YP_003668772.1|	-	0.15	11.5	1.3	2.1	7.8	0.1	2.3	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
SoxD	PF04267.7	gi|297526748|ref|YP_003668772.1|	-	0.15	11.8	0.2	0.54	10.1	0.0	1.8	2	0	0	2	2	2	0	Sarcosine	oxidase,	delta	subunit	family
zf-TFIIB	PF13453.1	gi|297526748|ref|YP_003668772.1|	-	0.16	11.1	0.6	1.5	8.0	0.4	2.1	1	1	0	1	1	1	0	Transcription	factor	zinc-finger
zf-LITAF-like	PF10601.4	gi|297526748|ref|YP_003668772.1|	-	0.18	11.7	0.8	5	7.0	0.1	2.1	2	0	0	2	2	2	0	LITAF-like	zinc	ribbon	domain
Zn_ribbon_recom	PF13408.1	gi|297526748|ref|YP_003668772.1|	-	0.19	11.9	1.8	15	5.9	0.0	2.2	2	0	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
Cys_rich_CPXG	PF14255.1	gi|297526748|ref|YP_003668772.1|	-	0.4	10.5	3.0	1.9	8.3	0.5	2.2	2	0	0	2	2	2	0	Cysteine-rich	CPXCG
DUF1610	PF07754.6	gi|297526748|ref|YP_003668772.1|	-	0.48	10.5	7.2	0.52	10.4	0.4	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
A2L_zn_ribbon	PF08792.5	gi|297526748|ref|YP_003668772.1|	-	0.9	9.0	3.0	18	4.9	0.1	2.2	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
PhnA_Zn_Ribbon	PF08274.7	gi|297526748|ref|YP_003668772.1|	-	0.98	9.2	4.8	8.2	6.3	0.6	2.6	2	1	0	2	2	2	0	PhnA	Zinc-Ribbon
DUF1936	PF09151.5	gi|297526748|ref|YP_003668772.1|	-	1	8.9	5.1	0.68	9.4	0.2	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1936)
Zn_Tnp_IS1	PF03811.8	gi|297526748|ref|YP_003668772.1|	-	1.1	8.8	3.6	8.5	5.9	0.0	2.2	2	0	0	2	2	2	0	InsA	N-terminal	domain
AhpC-TSA	PF00578.16	gi|297526749|ref|YP_003668773.1|	-	1.6e-36	124.6	0.0	2.5e-36	124.0	0.0	1.3	1	0	0	1	1	1	1	AhpC/TSA	family
Redoxin	PF08534.5	gi|297526749|ref|YP_003668773.1|	-	6.3e-17	61.4	0.0	8.6e-17	61.0	0.0	1.2	1	0	0	1	1	1	1	Redoxin
1-cysPrx_C	PF10417.4	gi|297526749|ref|YP_003668773.1|	-	5.4e-13	48.3	0.1	1e-12	47.4	0.1	1.5	1	0	0	1	1	1	1	C-terminal	domain	of	1-Cys	peroxiredoxin
Peptidase_M42	PF05343.9	gi|297526750|ref|YP_003668774.1|	-	1.6e-107	358.6	1.3	1.9e-107	358.4	0.9	1.0	1	0	0	1	1	1	1	M42	glutamyl	aminopeptidase
Peptidase_M20	PF01546.23	gi|297526750|ref|YP_003668774.1|	-	9.9e-14	51.2	0.1	1.8e-13	50.4	0.1	1.4	1	0	0	1	1	1	1	Peptidase	family	M20/M25/M40
Peptidase_M28	PF04389.12	gi|297526750|ref|YP_003668774.1|	-	0.00042	20.1	0.0	0.002	17.8	0.0	1.9	2	0	0	2	2	2	1	Peptidase	family	M28
Peptidase_M18	PF02127.10	gi|297526750|ref|YP_003668774.1|	-	0.0023	16.5	0.1	0.0091	14.5	0.0	2.0	3	0	0	3	3	3	1	Aminopeptidase	I	zinc	metalloprotease	(M18)
Lactamase_B	PF00753.22	gi|297526751|ref|YP_003668775.1|	-	4.3e-17	62.3	0.1	6.1e-17	61.9	0.1	1.2	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
FMN_red	PF03358.10	gi|297526751|ref|YP_003668775.1|	-	5.3e-05	22.7	0.0	0.00016	21.1	0.0	1.8	2	0	0	2	2	2	1	NADPH-dependent	FMN	reductase
Spermine_synth	PF01564.12	gi|297526751|ref|YP_003668775.1|	-	0.00045	19.2	0.3	0.0016	17.4	0.1	1.9	1	1	1	2	2	2	1	Spermine/spermidine	synthase
Peripla_BP_6	PF13458.1	gi|297526751|ref|YP_003668775.1|	-	0.002	17.5	0.0	0.0079	15.5	0.0	1.8	1	1	0	2	2	2	1	Periplasmic	binding	protein
Flavodoxin_1	PF00258.20	gi|297526751|ref|YP_003668775.1|	-	0.005	16.8	0.0	0.01	15.8	0.0	1.5	1	0	0	1	1	1	1	Flavodoxin
Egg_lysin	PF01303.12	gi|297526751|ref|YP_003668775.1|	-	0.036	14.0	0.2	0.13	12.2	0.0	2.0	2	0	0	2	2	2	0	Egg	lysin	(Sperm-lysin)
PGM_PMM_II	PF02879.11	gi|297526751|ref|YP_003668775.1|	-	0.049	13.9	0.0	2.1	8.6	0.0	2.7	3	0	0	3	3	3	0	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
VIT1	PF01988.14	gi|297526752|ref|YP_003668776.1|	-	4.3e-54	183.2	8.8	1.4e-53	181.5	4.5	2.1	2	0	0	2	2	2	1	VIT	family
Rubrerythrin	PF02915.12	gi|297526752|ref|YP_003668776.1|	-	5.6e-09	36.4	1.5	8.9e-09	35.7	0.2	1.9	2	1	0	2	2	2	1	Rubrerythrin
HCV_NS4b	PF01001.14	gi|297526752|ref|YP_003668776.1|	-	0.19	11.1	2.4	1	8.7	1.1	2.1	2	0	0	2	2	2	0	Hepatitis	C	virus	non-structural	protein	NS4b
TENA_THI-4	PF03070.11	gi|297526753|ref|YP_003668777.1|	-	3.3e-50	170.7	0.3	3.7e-50	170.5	0.2	1.0	1	0	0	1	1	1	1	TENA/THI-4/PQQC	family
LAGLIDADG_1	PF00961.14	gi|297526753|ref|YP_003668777.1|	-	0.46	11.0	5.0	7.5	7.1	1.3	2.4	2	0	0	2	2	2	0	LAGLIDADG	endonuclease
ABC_cobalt	PF09819.4	gi|297526754|ref|YP_003668778.1|	-	2.6e-32	111.4	10.3	2.6e-32	111.4	7.1	2.0	1	1	1	2	2	2	1	ABC-type	cobalt	transport	system,	permease	component
DUF3147	PF11345.3	gi|297526754|ref|YP_003668778.1|	-	0.0027	17.7	0.7	0.0027	17.7	0.5	2.2	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF3147)
DUF3185	PF11381.3	gi|297526754|ref|YP_003668778.1|	-	0.087	12.5	1.0	0.087	12.5	0.7	3.2	3	1	0	3	3	3	0	Protein	of	unknown	function	(DUF3185)
UPF0016	PF01169.14	gi|297526754|ref|YP_003668778.1|	-	0.22	11.6	10.4	1.6	8.8	0.4	3.3	2	2	1	3	3	3	0	Uncharacterized	protein	family	UPF0016
PhaG_MnhG_YufB	PF03334.9	gi|297526754|ref|YP_003668778.1|	-	5.3	7.1	9.3	0.17	11.9	0.9	2.3	2	1	0	2	2	2	0	Na+/H+	antiporter	subunit
Thi4	PF01946.12	gi|297526755|ref|YP_003668779.1|	-	5e-63	212.2	2.3	5.8e-63	212.0	1.6	1.0	1	0	0	1	1	1	1	Thi4	family
DAO	PF01266.19	gi|297526755|ref|YP_003668779.1|	-	2.7e-12	46.2	2.8	1.7e-06	27.2	1.6	2.1	1	1	1	2	2	2	2	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|297526755|ref|YP_003668779.1|	-	2e-09	36.8	1.1	2e-05	23.6	0.5	2.4	1	1	2	3	3	3	2	FAD	binding	domain
NAD_binding_8	PF13450.1	gi|297526755|ref|YP_003668779.1|	-	3.7e-09	36.4	1.0	8.2e-09	35.3	0.7	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_oxidored	PF12831.2	gi|297526755|ref|YP_003668779.1|	-	3.7e-08	32.8	0.5	5.2e-08	32.3	0.3	1.2	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
HI0933_like	PF03486.9	gi|297526755|ref|YP_003668779.1|	-	4.1e-06	25.5	1.1	1e-05	24.2	0.7	1.6	2	0	0	2	2	2	1	HI0933-like	protein
FAD_binding_3	PF01494.14	gi|297526755|ref|YP_003668779.1|	-	7.3e-06	25.2	1.8	1e-05	24.7	1.2	1.2	1	0	0	1	1	1	1	FAD	binding	domain
Pyr_redox_2	PF07992.9	gi|297526755|ref|YP_003668779.1|	-	8.3e-06	25.8	0.2	1.2e-05	25.3	0.1	1.3	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|297526755|ref|YP_003668779.1|	-	7.9e-05	22.8	0.9	0.00031	20.8	0.6	1.8	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|297526755|ref|YP_003668779.1|	-	0.0026	16.6	1.0	0.0042	16.0	0.7	1.3	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
Pyr_redox	PF00070.22	gi|297526755|ref|YP_003668779.1|	-	0.0076	16.6	1.7	0.02	15.3	0.4	2.1	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Lycopene_cycl	PF05834.7	gi|297526755|ref|YP_003668779.1|	-	0.0088	15.0	0.3	0.031	13.1	0.2	1.8	2	0	0	2	2	2	1	Lycopene	cyclase	protein
Amino_oxidase	PF01593.19	gi|297526755|ref|YP_003668779.1|	-	0.023	13.8	0.1	0.035	13.1	0.1	1.2	1	0	0	1	1	1	0	Flavin	containing	amine	oxidoreductase
NAD_binding_9	PF13454.1	gi|297526755|ref|YP_003668779.1|	-	0.13	12.0	2.5	0.2	11.4	0.4	2.2	2	1	1	3	3	3	0	FAD-NAD(P)-binding
CbiQ	PF02361.11	gi|297526756|ref|YP_003668780.1|	-	6.2e-13	48.8	7.6	6.2e-13	48.8	5.3	1.4	2	0	0	2	2	2	1	Cobalt	transport	protein
ABC_tran	PF00005.22	gi|297526757|ref|YP_003668781.1|	-	7.2e-47	159.1	0.0	7.9e-23	81.2	0.0	2.6	3	0	0	3	3	2	2	ABC	transporter
AAA_21	PF13304.1	gi|297526757|ref|YP_003668781.1|	-	7.1e-32	111.5	9.6	2.6e-13	50.5	0.3	4.2	2	2	2	4	4	4	4	AAA	domain
AAA_15	PF13175.1	gi|297526757|ref|YP_003668781.1|	-	9.7e-14	51.2	4.9	0.00022	20.4	0.0	4.2	3	1	0	4	4	4	3	AAA	ATPase	domain
SMC_N	PF02463.14	gi|297526757|ref|YP_003668781.1|	-	3.5e-13	49.2	0.0	0.00039	19.7	0.0	4.0	3	1	0	3	3	3	3	RecF/RecN/SMC	N	terminal	domain
AAA_25	PF13481.1	gi|297526757|ref|YP_003668781.1|	-	1.8e-10	40.5	0.1	0.00039	19.8	0.1	2.9	2	1	0	2	2	2	2	AAA	domain
T2SE	PF00437.15	gi|297526757|ref|YP_003668781.1|	-	2.5e-09	36.4	1.7	0.0011	17.9	0.0	2.5	2	1	0	2	2	2	2	Type	II/IV	secretion	system	protein
AAA_29	PF13555.1	gi|297526757|ref|YP_003668781.1|	-	7.5e-09	34.9	1.3	0.0015	18.0	0.3	2.3	2	0	0	2	2	2	2	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.1	gi|297526757|ref|YP_003668781.1|	-	8.3e-09	35.6	3.7	0.0004	20.5	0.0	3.7	3	2	1	4	4	2	2	AAA	domain
AAA_23	PF13476.1	gi|297526757|ref|YP_003668781.1|	-	3.1e-08	34.1	9.8	0.00014	22.2	0.1	3.0	2	1	0	2	2	2	2	AAA	domain
AAA_16	PF13191.1	gi|297526757|ref|YP_003668781.1|	-	5.6e-08	32.9	0.0	0.0027	17.7	0.0	2.5	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_33	PF13671.1	gi|297526757|ref|YP_003668781.1|	-	1.5e-07	31.3	0.0	0.0012	18.7	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
NACHT	PF05729.7	gi|297526757|ref|YP_003668781.1|	-	1.6e-07	31.1	0.7	0.018	14.7	0.0	2.8	3	0	0	3	3	2	2	NACHT	domain
AAA_14	PF13173.1	gi|297526757|ref|YP_003668781.1|	-	2.7e-07	30.5	3.2	0.043	13.7	0.0	4.0	2	2	1	3	3	3	2	AAA	domain
DUF258	PF03193.11	gi|297526757|ref|YP_003668781.1|	-	5.7e-07	28.8	0.2	0.034	13.3	0.1	2.3	2	0	0	2	2	2	2	Protein	of	unknown	function,	DUF258
AAA_10	PF12846.2	gi|297526757|ref|YP_003668781.1|	-	6.3e-07	29.1	1.9	0.069	12.5	0.0	3.5	3	1	0	4	4	4	2	AAA-like	domain
FtsK_SpoIIIE	PF01580.13	gi|297526757|ref|YP_003668781.1|	-	7.7e-07	28.7	0.1	0.0044	16.5	0.0	2.5	2	0	0	2	2	2	2	FtsK/SpoIIIE	family
Arch_ATPase	PF01637.13	gi|297526757|ref|YP_003668781.1|	-	1.6e-06	27.9	4.2	0.021	14.5	0.1	3.3	3	1	0	3	3	3	2	Archaeal	ATPase
AAA_18	PF13238.1	gi|297526757|ref|YP_003668781.1|	-	1.8e-06	28.2	3.3	0.0074	16.5	0.1	3.7	4	0	0	4	4	3	1	AAA	domain
AAA_17	PF13207.1	gi|297526757|ref|YP_003668781.1|	-	3.3e-06	27.9	8.3	0.021	15.6	1.2	3.4	3	1	0	3	3	2	2	AAA	domain
UPF0079	PF02367.12	gi|297526757|ref|YP_003668781.1|	-	4.4e-06	26.3	0.4	0.011	15.4	0.0	2.5	2	0	0	2	2	2	2	Uncharacterised	P-loop	hydrolase	UPF0079
AAA	PF00004.24	gi|297526757|ref|YP_003668781.1|	-	1.1e-05	25.6	1.3	1.7	8.8	0.0	4.5	4	0	0	4	4	4	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
MobB	PF03205.9	gi|297526757|ref|YP_003668781.1|	-	1.5e-05	24.7	2.8	0.048	13.3	0.1	2.5	2	0	0	2	2	2	2	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_24	PF13479.1	gi|297526757|ref|YP_003668781.1|	-	1.7e-05	24.5	3.7	0.061	12.9	0.0	3.0	3	1	0	3	3	3	2	AAA	domain
AAA_19	PF13245.1	gi|297526757|ref|YP_003668781.1|	-	1.9e-05	24.2	2.3	0.092	12.5	0.5	2.4	2	0	0	2	2	2	2	Part	of	AAA	domain
AAA_30	PF13604.1	gi|297526757|ref|YP_003668781.1|	-	2.6e-05	23.9	0.1	0.12	11.8	0.0	2.5	3	0	0	3	3	2	2	AAA	domain
Rad17	PF03215.10	gi|297526757|ref|YP_003668781.1|	-	3e-05	22.9	0.1	0.009	14.7	0.0	2.2	2	0	0	2	2	2	1	Rad17	cell	cycle	checkpoint	protein
Pox_A32	PF04665.7	gi|297526757|ref|YP_003668781.1|	-	3.5e-05	23.2	0.5	0.11	11.8	0.0	2.7	3	0	0	3	3	2	2	Poxvirus	A32	protein
cobW	PF02492.14	gi|297526757|ref|YP_003668781.1|	-	6e-05	22.5	5.2	0.13	11.7	0.0	2.5	2	0	0	2	2	2	2	CobW/HypB/UreG,	nucleotide-binding	domain
ATP_bind_1	PF03029.12	gi|297526757|ref|YP_003668781.1|	-	7.2e-05	22.4	0.1	0.21	11.1	0.0	2.4	2	0	0	2	2	2	2	Conserved	hypothetical	ATP	binding	protein
MutS_V	PF00488.16	gi|297526757|ref|YP_003668781.1|	-	0.00014	21.3	0.1	0.088	12.2	0.0	2.4	2	0	0	2	2	2	1	MutS	domain	V
RNA_helicase	PF00910.17	gi|297526757|ref|YP_003668781.1|	-	0.00017	21.7	0.2	0.32	11.1	0.0	2.8	2	1	0	2	2	2	1	RNA	helicase
Mg_chelatase	PF01078.16	gi|297526757|ref|YP_003668781.1|	-	0.00017	20.8	0.1	0.13	11.4	0.0	2.5	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_5	PF07728.9	gi|297526757|ref|YP_003668781.1|	-	0.00033	20.4	0.6	1.6	8.4	0.1	3.5	3	0	0	3	3	3	1	AAA	domain	(dynein-related	subfamily)
PRK	PF00485.13	gi|297526757|ref|YP_003668781.1|	-	0.001	18.6	0.1	0.09	12.3	0.0	2.4	2	0	0	2	2	2	1	Phosphoribulokinase	/	Uridine	kinase	family
Miro	PF08477.8	gi|297526757|ref|YP_003668781.1|	-	0.0014	19.1	0.3	0.52	10.8	0.0	2.6	2	0	0	2	2	2	1	Miro-like	protein
SRPRB	PF09439.5	gi|297526757|ref|YP_003668781.1|	-	0.0014	17.8	4.2	0.29	10.3	0.1	3.8	4	0	0	4	4	4	1	Signal	recognition	particle	receptor	beta	subunit
IstB_IS21	PF01695.12	gi|297526757|ref|YP_003668781.1|	-	0.0021	17.4	0.6	0.45	9.9	0.1	2.5	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
AAA_28	PF13521.1	gi|297526757|ref|YP_003668781.1|	-	0.0031	17.4	6.5	0.29	11.0	1.5	2.7	2	0	0	2	2	2	1	AAA	domain
RNA12	PF10443.4	gi|297526757|ref|YP_003668781.1|	-	0.004	15.7	0.4	0.24	9.8	0.1	2.2	2	0	0	2	2	2	1	RNA12	protein
DEAD	PF00270.24	gi|297526757|ref|YP_003668781.1|	-	0.0042	16.5	0.0	5.3	6.5	0.1	3.3	2	2	0	3	3	3	0	DEAD/DEAH	box	helicase
PhoH	PF02562.11	gi|297526757|ref|YP_003668781.1|	-	0.0045	16.2	0.1	2.1	7.5	0.0	2.4	2	0	0	2	2	2	0	PhoH-like	protein
SbcCD_C	PF13558.1	gi|297526757|ref|YP_003668781.1|	-	0.0063	16.4	0.0	1.5	8.7	0.0	3.1	2	1	0	2	2	2	1	Putative	exonuclease	SbcCD,	C	subunit
DAP3	PF10236.4	gi|297526757|ref|YP_003668781.1|	-	0.0071	15.3	0.0	0.2	10.5	0.0	2.3	2	0	0	2	2	2	1	Mitochondrial	ribosomal	death-associated	protein	3
Septin	PF00735.13	gi|297526757|ref|YP_003668781.1|	-	0.0073	15.3	2.3	1.3	7.9	0.0	2.4	2	0	0	2	2	2	1	Septin
AAA_11	PF13086.1	gi|297526757|ref|YP_003668781.1|	-	0.0076	15.8	0.0	3.5	7.1	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
Guanylate_kin	PF00625.16	gi|297526757|ref|YP_003668781.1|	-	0.0082	15.5	0.2	2.9	7.2	0.0	2.5	2	0	0	2	2	2	0	Guanylate	kinase
ATP-synt_ab	PF00006.20	gi|297526757|ref|YP_003668781.1|	-	0.0098	15.4	0.1	4.4	6.7	0.1	2.3	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
Zeta_toxin	PF06414.7	gi|297526757|ref|YP_003668781.1|	-	0.0099	14.9	0.1	3.2	6.8	0.0	2.4	2	0	0	2	2	2	0	Zeta	toxin
PIF1	PF05970.9	gi|297526757|ref|YP_003668781.1|	-	0.01	14.7	0.0	0.76	8.6	0.0	2.3	2	0	0	2	2	2	0	PIF1-like	helicase
NB-ARC	PF00931.17	gi|297526757|ref|YP_003668781.1|	-	0.018	13.9	0.4	4.4	6.0	0.1	2.5	2	0	0	2	2	2	0	NB-ARC	domain
PduV-EutP	PF10662.4	gi|297526757|ref|YP_003668781.1|	-	0.02	14.3	1.8	2.3	7.7	0.4	2.8	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
TrwB_AAD_bind	PF10412.4	gi|297526757|ref|YP_003668781.1|	-	0.023	13.3	0.2	3.3	6.2	0.0	2.8	3	0	0	3	3	3	0	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
ResIII	PF04851.10	gi|297526757|ref|YP_003668781.1|	-	0.026	14.3	0.0	1.9	8.2	0.0	2.3	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
Adeno_IVa2	PF02456.10	gi|297526757|ref|YP_003668781.1|	-	0.03	12.9	0.1	1.9	7.0	0.0	2.1	2	0	0	2	2	2	0	Adenovirus	IVa2	protein
AAA_35	PF14516.1	gi|297526757|ref|YP_003668781.1|	-	0.04	12.5	0.0	0.23	10.0	0.0	2.0	2	0	0	2	2	2	0	AAA-like	domain
ArgK	PF03308.11	gi|297526757|ref|YP_003668781.1|	-	0.044	12.5	0.4	0.68	8.6	0.1	2.2	2	0	0	2	2	2	0	ArgK	protein
NTPase_1	PF03266.10	gi|297526757|ref|YP_003668781.1|	-	0.055	13.1	11.4	0.066	12.9	1.0	2.8	3	0	0	3	3	2	0	NTPase
KAP_NTPase	PF07693.9	gi|297526757|ref|YP_003668781.1|	-	0.058	12.3	0.4	6.8	5.5	0.1	2.6	2	1	0	2	2	2	0	KAP	family	P-loop	domain
APS_kinase	PF01583.15	gi|297526757|ref|YP_003668781.1|	-	0.059	13.0	0.1	0.58	9.7	0.1	2.2	2	0	0	2	2	2	0	Adenylylsulphate	kinase
SRP54	PF00448.17	gi|297526757|ref|YP_003668781.1|	-	0.074	12.4	5.2	0.99	8.8	0.1	2.4	2	0	0	2	2	2	0	SRP54-type	protein,	GTPase	domain
MMR_HSR1	PF01926.18	gi|297526757|ref|YP_003668781.1|	-	0.083	12.8	4.5	4.7	7.1	0.2	2.9	3	1	0	3	3	2	0	50S	ribosome-binding	GTPase
KaiC	PF06745.8	gi|297526757|ref|YP_003668781.1|	-	0.092	11.8	5.8	1.7	7.6	0.3	3.0	3	1	0	3	3	3	0	KaiC
Zot	PF05707.7	gi|297526757|ref|YP_003668781.1|	-	0.1	12.0	0.4	2.8	7.3	0.0	2.7	3	0	0	3	3	2	0	Zonular	occludens	toxin	(Zot)
RuvA_C	PF07499.8	gi|297526757|ref|YP_003668781.1|	-	0.12	12.4	0.1	0.32	11.1	0.0	1.7	1	0	0	1	1	1	0	RuvA,	C-terminal	domain
RecA	PF00154.16	gi|297526757|ref|YP_003668781.1|	-	0.13	11.2	0.3	11	4.9	0.1	2.2	2	0	0	2	2	2	0	recA	bacterial	DNA	recombination	protein
Dynamin_N	PF00350.18	gi|297526757|ref|YP_003668781.1|	-	0.16	11.7	0.5	2.6	7.8	0.0	2.4	2	0	0	2	2	2	0	Dynamin	family
DUF2075	PF09848.4	gi|297526757|ref|YP_003668781.1|	-	0.21	10.5	1.0	1.1	8.1	0.3	2.1	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
ABC_ATPase	PF09818.4	gi|297526757|ref|YP_003668781.1|	-	0.27	9.7	2.9	1.1	7.6	0.0	2.3	2	0	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
GvpD	PF07088.6	gi|297526757|ref|YP_003668781.1|	-	0.31	9.3	2.0	3.4	5.8	0.3	2.1	2	0	0	2	2	2	0	GvpD	gas	vesicle	protein
AAA_13	PF13166.1	gi|297526757|ref|YP_003668781.1|	-	0.39	9.1	3.7	1	7.7	0.0	3.1	4	0	0	4	4	4	0	AAA	domain
Viral_helicase1	PF01443.13	gi|297526757|ref|YP_003668781.1|	-	0.39	10.1	1.5	15	5.0	0.1	2.6	3	0	0	3	3	2	0	Viral	(Superfamily	1)	RNA	helicase
Phos_pyr_kin	PF08543.7	gi|297526758|ref|YP_003668782.1|	-	3.2e-94	314.7	1.9	4.4e-94	314.2	1.3	1.2	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
Aldolase_2	PF10120.4	gi|297526758|ref|YP_003668782.1|	-	1.2e-65	220.0	0.7	2.3e-65	219.1	0.5	1.5	1	0	0	1	1	1	1	Putative	aldolase
PfkB	PF00294.19	gi|297526758|ref|YP_003668782.1|	-	7.4e-13	48.2	0.1	1.2e-12	47.5	0.1	1.3	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
HK	PF02110.10	gi|297526758|ref|YP_003668782.1|	-	0.0012	18.0	1.2	0.0022	17.2	0.8	1.3	1	0	0	1	1	1	1	Hydroxyethylthiazole	kinase	family
Carb_kinase	PF01256.12	gi|297526758|ref|YP_003668782.1|	-	1.3	8.2	5.5	0.22	10.7	0.4	2.2	2	1	0	2	2	2	0	Carbohydrate	kinase
HTH_24	PF13412.1	gi|297526759|ref|YP_003668783.1|	-	1.2e-17	63.0	2.2	2.6e-17	61.9	0.5	2.1	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|297526759|ref|YP_003668783.1|	-	1.6e-16	59.5	0.2	2.6e-16	58.8	0.1	1.3	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
AsnC_trans_reg	PF01037.16	gi|297526759|ref|YP_003668783.1|	-	2.8e-10	39.7	0.0	5.2e-10	38.8	0.0	1.5	1	0	0	1	1	1	1	AsnC	family
HTH_11	PF08279.7	gi|297526759|ref|YP_003668783.1|	-	3.4e-08	32.9	0.4	3.4e-08	32.9	0.3	2.1	3	0	0	3	3	3	1	HTH	domain
TrmB	PF01978.14	gi|297526759|ref|YP_003668783.1|	-	1.2e-06	28.0	0.6	8.4e-06	25.4	0.3	2.0	1	1	1	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.17	gi|297526759|ref|YP_003668783.1|	-	1.9e-06	27.4	0.0	4.8e-06	26.1	0.0	1.7	2	0	0	2	2	2	1	MarR	family
HTH_34	PF13601.1	gi|297526759|ref|YP_003668783.1|	-	2.5e-05	24.1	0.3	0.00011	22.1	0.1	1.9	1	1	1	2	2	2	1	Winged	helix	DNA-binding	domain
HTH_Mga	PF08280.6	gi|297526759|ref|YP_003668783.1|	-	0.00014	21.5	0.0	0.00035	20.2	0.0	1.6	1	0	0	1	1	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
HxlR	PF01638.12	gi|297526759|ref|YP_003668783.1|	-	0.00022	20.8	0.1	0.00034	20.1	0.0	1.3	1	0	0	1	1	1	1	HxlR-like	helix-turn-helix
HTH_5	PF01022.15	gi|297526759|ref|YP_003668783.1|	-	0.00042	19.9	0.0	0.00087	18.9	0.0	1.6	2	0	0	2	2	1	1	Bacterial	regulatory	protein,	arsR	family
MarR_2	PF12802.2	gi|297526759|ref|YP_003668783.1|	-	0.00071	19.1	0.0	0.0013	18.3	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_20	PF12840.2	gi|297526759|ref|YP_003668783.1|	-	0.00098	18.8	0.0	0.0016	18.2	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
TFIIE_alpha	PF02002.12	gi|297526759|ref|YP_003668783.1|	-	0.0017	17.8	2.2	0.0047	16.4	0.7	2.0	1	1	1	2	2	2	1	TFIIE	alpha	subunit
Rrf2	PF02082.15	gi|297526759|ref|YP_003668783.1|	-	0.0017	18.3	0.1	0.02	14.9	0.0	2.2	2	0	0	2	2	2	1	Transcriptional	regulator
HTH_27	PF13463.1	gi|297526759|ref|YP_003668783.1|	-	0.0024	18.1	0.0	0.019	15.2	0.0	2.2	2	0	0	2	2	2	1	Winged	helix	DNA-binding	domain
B-block_TFIIIC	PF04182.7	gi|297526759|ref|YP_003668783.1|	-	0.0051	16.6	0.6	3.3	7.6	0.0	2.3	1	1	1	2	2	2	2	B-block	binding	subunit	of	TFIIIC
LexA_DNA_bind	PF01726.11	gi|297526759|ref|YP_003668783.1|	-	0.014	14.9	0.1	0.067	12.7	0.0	2.0	2	0	0	2	2	2	0	LexA	DNA	binding	domain
HTH_Crp_2	PF13545.1	gi|297526759|ref|YP_003668783.1|	-	0.016	14.9	0.0	0.035	13.9	0.0	1.5	1	0	0	1	1	1	0	Crp-like	helix-turn-helix	domain
FaeA	PF04703.7	gi|297526759|ref|YP_003668783.1|	-	0.021	14.9	0.1	0.037	14.1	0.1	1.3	1	0	0	1	1	1	0	FaeA-like	protein
HTH_10	PF04967.7	gi|297526759|ref|YP_003668783.1|	-	0.027	14.0	0.1	0.051	13.1	0.0	1.4	1	0	0	1	1	1	0	HTH	DNA	binding	domain
RepL	PF05732.6	gi|297526759|ref|YP_003668783.1|	-	0.044	12.9	0.1	0.076	12.2	0.1	1.4	1	0	0	1	1	1	0	Firmicute	plasmid	replication	protein	(RepL)
HTH_CodY	PF08222.6	gi|297526759|ref|YP_003668783.1|	-	0.058	12.7	0.1	0.099	12.0	0.1	1.4	1	0	0	1	1	1	0	CodY	helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|297526759|ref|YP_003668783.1|	-	0.06	12.8	0.1	0.12	11.8	0.1	1.5	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_28	PF13518.1	gi|297526759|ref|YP_003668783.1|	-	0.074	13.0	0.0	0.17	11.9	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
DUF2250	PF10007.4	gi|297526759|ref|YP_003668783.1|	-	0.093	12.6	0.9	0.28	11.1	0.3	1.9	1	1	0	2	2	2	0	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
NapD	PF03927.8	gi|297526759|ref|YP_003668783.1|	-	0.12	12.2	0.0	0.21	11.4	0.0	1.4	1	0	0	1	1	1	0	NapD	protein
HTH_9	PF08221.6	gi|297526759|ref|YP_003668783.1|	-	0.12	12.2	0.0	0.24	11.3	0.0	1.4	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
Desulfoferrodox	PF01880.13	gi|297526761|ref|YP_003668785.1|	-	3.6e-28	97.6	0.0	4.7e-28	97.3	0.0	1.1	1	0	0	1	1	1	1	Desulfoferrodoxin
SoxY	PF13501.1	gi|297526761|ref|YP_003668785.1|	-	7.3e-05	22.7	0.0	0.00012	22.0	0.0	1.3	1	1	0	1	1	1	1	Sulfur	oxidation	protein	SoxY
Fe-ADH	PF00465.14	gi|297526762|ref|YP_003668786.1|	-	3.6e-87	292.3	0.0	4e-87	292.2	0.0	1.0	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH_2	PF13685.1	gi|297526762|ref|YP_003668786.1|	-	1.6e-15	57.1	0.2	3.4e-11	42.9	0.0	2.1	2	0	0	2	2	2	2	Iron-containing	alcohol	dehydrogenase
Lon_C	PF05362.8	gi|297526763|ref|YP_003668787.1|	-	2.3e-09	36.8	0.1	4.5e-09	35.9	0.1	1.4	1	0	0	1	1	1	1	Lon	protease	(S16)	C-terminal	proteolytic	domain
DNA_binding_1	PF01035.15	gi|297526764|ref|YP_003668788.1|	-	3.2e-26	90.8	0.0	3.8e-26	90.6	0.0	1.1	1	0	0	1	1	1	1	6-O-methylguanine	DNA	methyltransferase,	DNA	binding	domain
HTH_23	PF13384.1	gi|297526764|ref|YP_003668788.1|	-	0.00046	19.7	0.0	0.00074	19.0	0.0	1.3	1	0	0	1	1	1	1	Homeodomain-like	domain
Sigma70_r4_2	PF08281.7	gi|297526764|ref|YP_003668788.1|	-	0.031	13.7	0.0	0.058	12.8	0.0	1.4	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_28	PF13518.1	gi|297526764|ref|YP_003668788.1|	-	0.048	13.6	0.0	0.097	12.6	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_38	PF13936.1	gi|297526764|ref|YP_003668788.1|	-	0.075	12.5	0.0	0.13	11.8	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
GerE	PF00196.14	gi|297526764|ref|YP_003668788.1|	-	0.13	11.5	0.0	0.25	10.6	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	luxR	family
ABC_tran	PF00005.22	gi|297526766|ref|YP_003668790.1|	-	7.1e-10	39.3	0.1	2.5e-09	37.5	0.1	1.8	1	1	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297526766|ref|YP_003668790.1|	-	1.9e-06	28.0	4.0	0.0034	17.3	0.7	2.4	1	1	1	2	2	2	2	AAA	domain
AAA_23	PF13476.1	gi|297526766|ref|YP_003668790.1|	-	3.5e-06	27.5	0.2	5.6e-06	26.8	0.2	1.4	1	0	0	1	1	1	1	AAA	domain
NTPase_1	PF03266.10	gi|297526766|ref|YP_003668790.1|	-	0.012	15.3	1.5	0.93	9.1	0.3	2.9	2	1	0	2	2	2	0	NTPase
AAA_15	PF13175.1	gi|297526766|ref|YP_003668790.1|	-	0.016	14.2	1.0	0.023	13.7	0.7	1.4	1	1	0	1	1	1	0	AAA	ATPase	domain
PRK	PF00485.13	gi|297526766|ref|YP_003668790.1|	-	0.024	14.1	0.0	0.046	13.2	0.0	1.4	1	1	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_29	PF13555.1	gi|297526766|ref|YP_003668790.1|	-	0.03	13.8	0.1	0.061	12.8	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
SMC_N	PF02463.14	gi|297526766|ref|YP_003668790.1|	-	0.031	13.5	0.2	0.097	11.8	0.1	1.8	2	0	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
CbiA	PF01656.18	gi|297526766|ref|YP_003668790.1|	-	0.12	11.8	0.1	4.5	6.6	0.0	2.2	2	0	0	2	2	2	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_25	PF13481.1	gi|297526766|ref|YP_003668790.1|	-	0.17	11.2	0.0	0.29	10.5	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
Rhomboid	PF01694.17	gi|297526767|ref|YP_003668791.1|	-	0.064	13.2	3.6	0.033	14.2	0.9	1.6	1	1	1	2	2	2	0	Rhomboid	family
SPC12	PF06645.8	gi|297526768|ref|YP_003668792.1|	-	3.7	7.4	5.0	20	5.1	0.2	2.0	1	1	1	2	2	2	0	Microsomal	signal	peptidase	12	kDa	subunit	(SPC12)
PhoU_div	PF01865.11	gi|297526769|ref|YP_003668793.1|	-	1.4e-23	83.2	8.3	1.7e-23	82.9	5.7	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF47
PhoU	PF01895.14	gi|297526769|ref|YP_003668793.1|	-	0.0002	21.7	1.1	0.0002	21.7	0.7	2.6	2	1	0	2	2	2	1	PhoU	domain
Cas_DxTHG	PF09455.5	gi|297526769|ref|YP_003668793.1|	-	0.0042	16.2	0.9	0.0068	15.5	0.5	1.3	1	1	0	1	1	1	1	CRISPR-associated	(Cas)	DxTHG	family
Zw10	PF06248.8	gi|297526769|ref|YP_003668793.1|	-	0.016	13.3	0.1	0.023	12.8	0.0	1.1	1	0	0	1	1	1	0	Centromere/kinetochore	Zw10
Baculo_PEP_C	PF04513.7	gi|297526769|ref|YP_003668793.1|	-	0.062	13.1	0.1	1.7	8.4	0.0	2.7	3	0	0	3	3	3	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
STAT_int	PF02865.12	gi|297526769|ref|YP_003668793.1|	-	0.11	12.4	0.8	2.8	7.8	0.0	2.7	2	1	1	3	3	3	0	STAT	protein,	protein	interaction	domain
COPI_C	PF06957.6	gi|297526769|ref|YP_003668793.1|	-	0.12	10.9	0.0	2.6	6.4	0.0	2.1	1	1	1	2	2	2	0	Coatomer	(COPI)	alpha	subunit	C-terminus
DUF848	PF05852.6	gi|297526769|ref|YP_003668793.1|	-	0.14	12.0	5.5	1.1	9.0	0.0	2.9	2	1	1	3	3	3	0	Gammaherpesvirus	protein	of	unknown	function	(DUF848)
DUF4259	PF14078.1	gi|297526769|ref|YP_003668793.1|	-	0.27	11.7	2.1	1.1	9.7	0.4	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4259)
CesA	PF11439.3	gi|297526769|ref|YP_003668793.1|	-	0.87	9.5	4.5	2	8.4	0.2	2.6	1	1	1	2	2	2	0	Type	III	secretion	system	filament	chaperone	CesA
DUF904	PF06005.7	gi|297526769|ref|YP_003668793.1|	-	0.92	9.8	9.2	1	9.6	2.3	3.1	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF904)
THUMP	PF02926.12	gi|297526771|ref|YP_003668795.1|	-	4.7e-05	23.2	0.4	6.4e-05	22.8	0.3	1.2	1	0	0	1	1	1	1	THUMP	domain
XdhC_C	PF13478.1	gi|297526773|ref|YP_003668797.1|	-	3.5e-25	88.8	0.0	5.2e-25	88.3	0.0	1.3	1	0	0	1	1	1	1	XdhC	Rossmann	domain
XdhC_CoxI	PF02625.11	gi|297526773|ref|YP_003668797.1|	-	6.8e-20	70.4	0.0	1e-19	69.8	0.0	1.3	1	0	0	1	1	1	1	XdhC	and	CoxI	family
TrkA_N	PF02254.13	gi|297526773|ref|YP_003668797.1|	-	7.3e-07	29.2	0.0	1.6e-06	28.0	0.0	1.6	1	0	0	1	1	1	1	TrkA-N	domain
AlaDh_PNT_C	PF01262.16	gi|297526773|ref|YP_003668797.1|	-	4.1e-05	23.2	0.0	7.1e-05	22.4	0.0	1.4	1	0	0	1	1	1	1	Alanine	dehydrogenase/PNT,	C-terminal	domain
2-Hacid_dh_C	PF02826.14	gi|297526773|ref|YP_003668797.1|	-	0.00059	19.0	0.2	0.015	14.4	0.0	2.3	2	0	0	2	2	2	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_binding_10	PF13460.1	gi|297526773|ref|YP_003668797.1|	-	0.00061	19.8	0.0	0.00099	19.1	0.0	1.3	1	0	0	1	1	1	1	NADH(P)-binding
Pyr_redox	PF00070.22	gi|297526773|ref|YP_003668797.1|	-	0.038	14.4	0.1	0.16	12.3	0.0	2.2	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
F420_oxidored	PF03807.12	gi|297526773|ref|YP_003668797.1|	-	0.075	13.4	0.3	4.3	7.8	0.0	2.4	2	0	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
PIN	PF01850.16	gi|297526774|ref|YP_003668798.1|	-	7e-11	42.5	0.4	8.3e-11	42.2	0.3	1.1	1	0	0	1	1	1	1	PIN	domain
PIN_2	PF10130.4	gi|297526774|ref|YP_003668798.1|	-	0.029	14.4	0.0	0.058	13.4	0.0	1.5	2	0	0	2	2	2	0	PIN	domain
RHH_3	PF12651.2	gi|297526775|ref|YP_003668799.1|	-	0.091	12.5	0.1	0.28	10.9	0.0	1.8	1	1	0	1	1	1	0	Ribbon-helix-helix	domain
SAS4	PF15460.1	gi|297526775|ref|YP_003668799.1|	-	0.33	10.8	2.9	2.4	8.0	0.4	2.2	1	1	0	1	1	1	0	Something	about	silencing,	SAS,	complex	subunit	4
RHH_1	PF01402.16	gi|297526775|ref|YP_003668799.1|	-	4.1	7.4	9.1	1.2	9.1	0.3	3.4	2	1	1	3	3	3	0	Ribbon-helix-helix	protein,	copG	family
HTH_24	PF13412.1	gi|297526776|ref|YP_003668800.1|	-	4.3e-12	45.2	0.0	9.7e-12	44.0	0.0	1.7	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_5	PF01022.15	gi|297526776|ref|YP_003668800.1|	-	1e-11	44.2	0.0	1.7e-11	43.5	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|297526776|ref|YP_003668800.1|	-	4.3e-10	39.2	0.0	6.6e-10	38.6	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR_2	PF12802.2	gi|297526776|ref|YP_003668800.1|	-	3.8e-08	32.8	0.0	6.9e-08	32.0	0.0	1.4	1	0	0	1	1	1	1	MarR	family
TrmB	PF01978.14	gi|297526776|ref|YP_003668800.1|	-	2.5e-07	30.2	0.2	4.2e-07	29.5	0.2	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.5	gi|297526776|ref|YP_003668800.1|	-	6.6e-07	28.8	0.0	9.6e-07	28.2	0.0	1.2	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_38	PF13936.1	gi|297526776|ref|YP_003668800.1|	-	1.5e-06	27.6	0.0	3.3e-06	26.5	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|297526776|ref|YP_003668800.1|	-	3.4e-06	26.5	0.0	6e-06	25.8	0.0	1.4	1	0	0	1	1	1	1	HTH	domain
Fe_dep_repress	PF01325.14	gi|297526776|ref|YP_003668800.1|	-	4.4e-06	26.5	0.1	8.3e-06	25.6	0.1	1.5	1	1	1	2	2	2	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_23	PF13384.1	gi|297526776|ref|YP_003668800.1|	-	8.6e-06	25.2	0.0	1.7e-05	24.2	0.0	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_27	PF13463.1	gi|297526776|ref|YP_003668800.1|	-	1.5e-05	25.1	0.0	2.6e-05	24.4	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
MarR	PF01047.17	gi|297526776|ref|YP_003668800.1|	-	9.5e-05	22.0	0.0	0.00016	21.2	0.0	1.4	1	0	0	1	1	1	1	MarR	family
LexA_DNA_bind	PF01726.11	gi|297526776|ref|YP_003668800.1|	-	0.00011	21.6	0.0	0.00017	21.0	0.0	1.3	1	0	0	1	1	1	1	LexA	DNA	binding	domain
HTH_AsnC-type	PF13404.1	gi|297526776|ref|YP_003668800.1|	-	0.00011	21.6	0.0	0.00021	20.7	0.0	1.5	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
DUF2633	PF11119.3	gi|297526776|ref|YP_003668800.1|	-	0.00013	21.5	0.0	0.00013	21.5	0.0	1.7	2	0	0	2	2	1	1	Protein	of	unknown	function	(DUF2633)
HTH_12	PF08461.5	gi|297526776|ref|YP_003668800.1|	-	0.00014	21.5	0.1	0.00032	20.3	0.0	1.6	1	1	0	1	1	1	1	Ribonuclease	R	winged-helix	domain
HTH_10	PF04967.7	gi|297526776|ref|YP_003668800.1|	-	0.00027	20.4	0.0	0.00055	19.4	0.0	1.5	1	0	0	1	1	1	1	HTH	DNA	binding	domain
Sigma70_r4_2	PF08281.7	gi|297526776|ref|YP_003668800.1|	-	0.0003	20.2	0.0	0.00055	19.3	0.0	1.4	1	0	0	1	1	1	1	Sigma-70,	region	4
GerE	PF00196.14	gi|297526776|ref|YP_003668800.1|	-	0.00099	18.3	0.0	0.0017	17.6	0.0	1.3	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	luxR	family
HTH_40	PF14493.1	gi|297526776|ref|YP_003668800.1|	-	0.0014	18.7	0.1	0.0024	18.0	0.1	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_29	PF13551.1	gi|297526776|ref|YP_003668800.1|	-	0.002	18.2	0.0	0.0033	17.5	0.0	1.4	1	0	0	1	1	1	1	Winged	helix-turn	helix
HTH_28	PF13518.1	gi|297526776|ref|YP_003668800.1|	-	0.0021	18.0	0.0	0.0033	17.3	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|297526776|ref|YP_003668800.1|	-	0.0032	17.5	0.0	0.0047	17.0	0.0	1.3	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_Crp_2	PF13545.1	gi|297526776|ref|YP_003668800.1|	-	0.0032	17.2	0.0	0.0062	16.3	0.0	1.4	1	0	0	1	1	1	1	Crp-like	helix-turn-helix	domain
RepL	PF05732.6	gi|297526776|ref|YP_003668800.1|	-	0.0037	16.4	0.0	0.0059	15.8	0.0	1.3	1	1	0	1	1	1	1	Firmicute	plasmid	replication	protein	(RepL)
B-block_TFIIIC	PF04182.7	gi|297526776|ref|YP_003668800.1|	-	0.004	16.9	0.0	0.0075	16.0	0.0	1.4	1	0	0	1	1	1	1	B-block	binding	subunit	of	TFIIIC
Terminase_5	PF06056.7	gi|297526776|ref|YP_003668800.1|	-	0.0079	15.7	0.0	0.017	14.6	0.0	1.6	1	0	0	1	1	1	1	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_DeoR	PF08220.7	gi|297526776|ref|YP_003668800.1|	-	0.011	15.2	0.0	0.02	14.4	0.0	1.5	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
HTH_30	PF13556.1	gi|297526776|ref|YP_003668800.1|	-	0.012	15.1	0.0	0.022	14.3	0.0	1.4	1	0	0	1	1	1	0	PucR	C-terminal	helix-turn-helix	domain
TetR_N	PF00440.18	gi|297526776|ref|YP_003668800.1|	-	0.015	14.9	0.0	0.03	13.9	0.0	1.4	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	tetR	family
DUF2513	PF10711.4	gi|297526776|ref|YP_003668800.1|	-	0.068	13.2	0.0	0.1	12.6	0.0	1.3	1	0	0	1	1	1	0	Hypothetical	protein	(DUF2513)
HTH_36	PF13730.1	gi|297526776|ref|YP_003668800.1|	-	0.082	13.0	0.0	0.21	11.7	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_Tnp_IS630	PF01710.11	gi|297526776|ref|YP_003668800.1|	-	0.089	12.4	0.0	0.12	11.9	0.0	1.3	1	0	0	1	1	1	0	Transposase
FeoC	PF09012.5	gi|297526776|ref|YP_003668800.1|	-	0.14	11.8	0.0	0.21	11.3	0.0	1.2	1	0	0	1	1	1	0	FeoC	like	transcriptional	regulator
HTH_1	PF00126.22	gi|297526776|ref|YP_003668800.1|	-	0.14	11.9	0.0	0.22	11.2	0.0	1.2	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
Beta_propel	PF09826.4	gi|297526777|ref|YP_003668801.1|	-	2.2e-135	452.0	11.4	2.6e-135	451.7	7.9	1.1	1	0	0	1	1	1	1	Beta	propeller	domain
YlbD_coat	PF14071.1	gi|297526777|ref|YP_003668801.1|	-	0.089	12.8	0.2	0.18	11.8	0.1	1.4	1	0	0	1	1	1	0	Putative	coat	protein
Fer2_4	PF13510.1	gi|297526778|ref|YP_003668802.1|	-	4.7e-21	74.3	0.0	9.1e-21	73.4	0.0	1.5	1	0	0	1	1	1	1	2Fe-2S	iron-sulfur	cluster	binding	domain
Pyr_redox_2	PF07992.9	gi|297526778|ref|YP_003668802.1|	-	9.2e-13	48.5	4.8	1.9e-07	31.2	0.1	3.6	2	1	0	3	3	3	3	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|297526778|ref|YP_003668802.1|	-	1e-11	45.2	0.4	1.9e-06	28.0	0.1	2.5	1	1	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
GIDA	PF01134.17	gi|297526778|ref|YP_003668802.1|	-	4.7e-09	35.5	4.8	0.0018	17.1	0.0	4.1	4	0	0	4	4	4	3	Glucose	inhibited	division	protein	A
FAD_binding_2	PF00890.19	gi|297526778|ref|YP_003668802.1|	-	7.2e-09	34.9	6.7	1.6e-05	23.9	0.6	3.3	2	1	1	3	3	3	3	FAD	binding	domain
FAD_binding_3	PF01494.14	gi|297526778|ref|YP_003668802.1|	-	8.8e-09	34.8	3.2	2.1e-05	23.7	0.1	2.4	3	0	0	3	3	3	2	FAD	binding	domain
NAD_binding_8	PF13450.1	gi|297526778|ref|YP_003668802.1|	-	3.3e-08	33.4	1.7	0.00014	21.7	0.1	2.7	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
DAO	PF01266.19	gi|297526778|ref|YP_003668802.1|	-	7.6e-07	28.3	5.0	0.002	17.1	0.0	3.1	4	0	0	4	4	4	2	FAD	dependent	oxidoreductase
Thi4	PF01946.12	gi|297526778|ref|YP_003668802.1|	-	1.6e-06	27.3	0.4	0.0007	18.7	0.0	2.4	2	0	0	2	2	2	2	Thi4	family
FAD_oxidored	PF12831.2	gi|297526778|ref|YP_003668802.1|	-	2e-06	27.1	1.8	4e-06	26.1	0.0	2.1	2	0	0	2	2	2	1	FAD	dependent	oxidoreductase
Pyr_redox	PF00070.22	gi|297526778|ref|YP_003668802.1|	-	4.5e-06	26.9	3.9	0.027	14.8	0.0	3.1	3	1	0	3	3	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|297526778|ref|YP_003668802.1|	-	2.6e-05	22.8	2.7	0.0006	18.4	0.1	2.4	2	0	0	2	2	2	1	HI0933-like	protein
NAD_binding_7	PF13241.1	gi|297526778|ref|YP_003668802.1|	-	6.3e-05	23.1	0.2	0.21	11.8	0.0	2.7	2	1	0	2	2	2	2	Putative	NAD(P)-binding
AlaDh_PNT_C	PF01262.16	gi|297526778|ref|YP_003668802.1|	-	0.00017	21.2	0.8	0.31	10.5	0.0	2.3	2	0	0	2	2	2	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
UDPG_MGDP_dh_N	PF03721.9	gi|297526778|ref|YP_003668802.1|	-	0.0029	17.0	0.8	0.27	10.5	0.0	2.4	2	0	0	2	2	2	1	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
ApbA	PF02558.11	gi|297526778|ref|YP_003668802.1|	-	0.022	14.1	0.1	0.072	12.5	0.0	1.9	2	0	0	2	2	2	0	Ketopantoate	reductase	PanE/ApbA
3HCDH_N	PF02737.13	gi|297526778|ref|YP_003668802.1|	-	0.04	13.5	0.3	8.5	5.9	0.0	2.4	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
ELFV_dehydrog	PF00208.16	gi|297526778|ref|YP_003668802.1|	-	0.045	13.3	0.0	0.19	11.2	0.0	1.9	2	0	0	2	2	2	0	Glutamate/Leucine/Phenylalanine/Valine	dehydrogenase
Shikimate_DH	PF01488.15	gi|297526778|ref|YP_003668802.1|	-	0.11	12.6	0.5	4.2	7.4	0.1	2.4	2	0	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
NAD_binding_9	PF13454.1	gi|297526778|ref|YP_003668802.1|	-	0.58	9.9	3.9	4	7.1	0.1	3.4	4	0	0	4	4	4	0	FAD-NAD(P)-binding
Lycopene_cycl	PF05834.7	gi|297526778|ref|YP_003668802.1|	-	1.7	7.4	7.4	0.065	12.1	0.6	1.9	3	0	0	3	3	3	0	Lycopene	cyclase	protein
ThiF	PF00899.16	gi|297526778|ref|YP_003668802.1|	-	5.6	6.7	6.0	2.7	7.7	0.5	2.7	3	0	0	3	3	3	0	ThiF	family
Fer4	PF00037.22	gi|297526779|ref|YP_003668803.1|	-	7.9e-11	41.0	18.9	3e-08	32.9	3.3	2.8	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|297526779|ref|YP_003668803.1|	-	7.8e-09	35.2	24.3	1.2e-05	25.0	1.3	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|297526779|ref|YP_003668803.1|	-	7.1e-08	32.7	10.0	1.3e-07	31.8	7.0	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|297526779|ref|YP_003668803.1|	-	3.5e-07	29.7	15.9	2.7e-05	23.8	1.9	2.7	2	1	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|297526779|ref|YP_003668803.1|	-	4.1e-07	29.7	6.2	0.00064	19.5	0.1	2.2	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|297526779|ref|YP_003668803.1|	-	2.5e-06	27.6	8.4	2.5e-06	27.6	5.8	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|297526779|ref|YP_003668803.1|	-	3e-06	27.1	1.4	0.00063	19.7	0.0	2.3	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|297526779|ref|YP_003668803.1|	-	9.4e-06	26.2	9.3	0.013	16.2	0.7	2.6	2	1	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.2	gi|297526779|ref|YP_003668803.1|	-	5.8e-05	22.7	15.8	6.9e-05	22.5	3.0	2.5	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_4	PF12800.2	gi|297526779|ref|YP_003668803.1|	-	0.0001	22.3	10.9	0.001	19.2	1.0	2.4	2	1	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|297526779|ref|YP_003668803.1|	-	0.00088	19.7	0.8	0.00088	19.7	0.6	3.1	2	2	1	3	3	3	1	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.1	gi|297526779|ref|YP_003668803.1|	-	0.0063	16.9	7.2	0.89	10.0	2.4	2.5	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|297526779|ref|YP_003668803.1|	-	0.016	15.5	9.0	0.028	14.7	1.1	2.4	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|297526779|ref|YP_003668803.1|	-	0.041	14.2	1.5	0.041	14.2	1.0	2.8	2	1	1	3	3	3	0	4Fe-4S	single	cluster	domain
Fer4_3	PF12798.2	gi|297526779|ref|YP_003668803.1|	-	0.14	12.7	17.6	2.1	9.0	1.5	2.6	2	1	0	2	2	2	0	4Fe-4S	binding	domain
Fer2_BFD	PF04324.10	gi|297526780|ref|YP_003668804.1|	-	3.8e-11	42.8	1.0	4.6e-11	42.6	0.7	1.1	1	0	0	1	1	1	1	BFD-like	[2Fe-2S]	binding	domain
DAO	PF01266.19	gi|297526781|ref|YP_003668805.1|	-	2.3e-69	234.0	0.0	2.6e-69	233.8	0.0	1.0	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Pyr_redox	PF00070.22	gi|297526781|ref|YP_003668805.1|	-	3.3e-05	24.2	0.4	0.027	14.8	0.1	2.7	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_2	PF07992.9	gi|297526781|ref|YP_003668805.1|	-	5.2e-05	23.2	3.7	0.0015	18.4	2.1	2.4	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.19	gi|297526781|ref|YP_003668805.1|	-	9.6e-05	21.3	0.0	0.00031	19.6	0.0	1.7	1	1	0	1	1	1	1	FAD	binding	domain
Pyr_redox_3	PF13738.1	gi|297526781|ref|YP_003668805.1|	-	0.00036	20.6	0.0	0.00078	19.5	0.0	1.5	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|297526781|ref|YP_003668805.1|	-	0.00047	20.1	0.1	0.0011	18.9	0.1	1.7	1	0	0	1	1	1	1	NAD(P)-binding	Rossmann-like	domain
FAD_binding_3	PF01494.14	gi|297526781|ref|YP_003668805.1|	-	0.00072	18.6	0.0	0.001	18.1	0.0	1.2	1	0	0	1	1	1	1	FAD	binding	domain
Shikimate_DH	PF01488.15	gi|297526781|ref|YP_003668805.1|	-	0.0048	17.0	0.1	0.011	15.8	0.1	1.5	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
Thi4	PF01946.12	gi|297526781|ref|YP_003668805.1|	-	0.013	14.6	0.9	0.55	9.2	0.1	2.2	2	0	0	2	2	2	0	Thi4	family
NAD_binding_9	PF13454.1	gi|297526781|ref|YP_003668805.1|	-	0.022	14.5	0.1	0.039	13.7	0.1	1.3	1	0	0	1	1	1	0	FAD-NAD(P)-binding
HI0933_like	PF03486.9	gi|297526781|ref|YP_003668805.1|	-	0.032	12.7	0.5	2.5	6.4	0.0	2.1	2	0	0	2	2	2	0	HI0933-like	protein
ThiF	PF00899.16	gi|297526781|ref|YP_003668805.1|	-	0.074	12.8	0.1	0.13	12.1	0.1	1.4	1	0	0	1	1	1	0	ThiF	family
PfkB	PF00294.19	gi|297526782|ref|YP_003668806.1|	-	8.9e-55	185.9	0.0	1.1e-54	185.6	0.0	1.0	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Phos_pyr_kin	PF08543.7	gi|297526782|ref|YP_003668806.1|	-	2.7e-06	26.7	0.0	4.1e-06	26.1	0.0	1.3	1	0	0	1	1	1	1	Phosphomethylpyrimidine	kinase
DUF2191	PF09957.4	gi|297526783|ref|YP_003668807.1|	-	1.3e-05	24.9	0.0	2.2e-05	24.1	0.0	1.4	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	bacteria	(DUF2191)
RHH_3	PF12651.2	gi|297526783|ref|YP_003668807.1|	-	2.9e-05	23.7	0.1	0.00017	21.2	0.0	2.1	2	0	0	2	2	2	1	Ribbon-helix-helix	domain
RHH_1	PF01402.16	gi|297526783|ref|YP_003668807.1|	-	0.00067	19.4	0.3	0.0012	18.6	0.2	1.4	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
DUF1874	PF08960.5	gi|297526783|ref|YP_003668807.1|	-	0.052	13.3	0.7	0.067	12.9	0.5	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1874)
ATP_bind_3	PF01171.15	gi|297526784|ref|YP_003668808.1|	-	2.4e-13	50.0	0.0	5.1e-12	45.6	0.0	2.6	2	1	0	2	2	2	1	PP-loop	family
tRNA_Me_trans	PF03054.11	gi|297526784|ref|YP_003668808.1|	-	0.0012	17.4	0.0	0.0016	17.0	0.0	1.1	1	0	0	1	1	1	1	tRNA	methyl	transferase
PAPS_reduct	PF01507.14	gi|297526784|ref|YP_003668808.1|	-	0.08	12.7	0.0	0.14	11.9	0.0	1.4	1	0	0	1	1	1	0	Phosphoadenosine	phosphosulfate	reductase	family
RecR	PF02132.10	gi|297526784|ref|YP_003668808.1|	-	1.4	8.4	11.7	0.039	13.3	1.3	2.9	3	0	0	3	3	3	0	RecR	protein
ThiS	PF02597.15	gi|297526785|ref|YP_003668809.1|	-	3.5e-09	36.9	0.4	4e-09	36.7	0.3	1.0	1	0	0	1	1	1	1	ThiS	family
SLBB	PF10531.4	gi|297526785|ref|YP_003668809.1|	-	0.0078	16.0	0.0	0.0099	15.7	0.0	1.4	1	0	0	1	1	1	1	SLBB	domain
Cellulase	PF00150.13	gi|297526786|ref|YP_003668810.1|	-	8.9e-61	205.5	0.1	2.8e-60	203.8	0.0	1.7	2	0	0	2	2	2	1	Cellulase	(glycosyl	hydrolase	family	5)
DUF4038	PF13204.1	gi|297526786|ref|YP_003668810.1|	-	0.012	14.9	0.0	0.019	14.3	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4038)
TMEM154	PF15102.1	gi|297526786|ref|YP_003668810.1|	-	0.064	12.9	0.2	0.1	12.3	0.2	1.3	1	0	0	1	1	1	0	TMEM154	protein	family
ABC_tran	PF00005.22	gi|297526787|ref|YP_003668811.1|	-	3.8e-27	95.2	0.0	5.1e-27	94.8	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|297526787|ref|YP_003668811.1|	-	1.9e-14	53.7	0.2	3.4e-14	52.9	0.2	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|297526787|ref|YP_003668811.1|	-	5.3e-07	29.8	1.0	0.00074	19.5	0.7	2.2	1	1	0	1	1	1	1	AAA	domain
AAA_22	PF13401.1	gi|297526787|ref|YP_003668811.1|	-	6.5e-05	23.0	0.0	0.0011	19.1	0.0	2.1	1	1	0	1	1	1	1	AAA	domain
KaiC	PF06745.8	gi|297526787|ref|YP_003668811.1|	-	0.00022	20.4	0.0	0.0053	15.9	0.0	2.4	2	0	0	2	2	2	1	KaiC
MobB	PF03205.9	gi|297526787|ref|YP_003668811.1|	-	0.00025	20.7	0.0	0.00048	19.8	0.0	1.4	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_18	PF13238.1	gi|297526787|ref|YP_003668811.1|	-	0.00041	20.6	0.0	0.00097	19.4	0.0	1.7	2	0	0	2	2	1	1	AAA	domain
SMC_N	PF02463.14	gi|297526787|ref|YP_003668811.1|	-	0.00057	19.1	0.0	0.00085	18.6	0.0	1.2	1	0	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_16	PF13191.1	gi|297526787|ref|YP_003668811.1|	-	0.0012	18.8	0.0	0.0021	18.0	0.0	1.4	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_29	PF13555.1	gi|297526787|ref|YP_003668811.1|	-	0.0027	17.2	0.0	0.005	16.3	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_19	PF13245.1	gi|297526787|ref|YP_003668811.1|	-	0.0034	17.0	0.0	0.0066	16.1	0.0	1.4	1	0	0	1	1	1	1	Part	of	AAA	domain
RecA	PF00154.16	gi|297526787|ref|YP_003668811.1|	-	0.0041	16.2	0.0	0.0073	15.4	0.0	1.3	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
Arch_ATPase	PF01637.13	gi|297526787|ref|YP_003668811.1|	-	0.0046	16.6	0.1	0.0091	15.7	0.0	1.5	2	0	0	2	2	1	1	Archaeal	ATPase
DUF87	PF01935.12	gi|297526787|ref|YP_003668811.1|	-	0.0053	16.6	0.0	0.016	15.0	0.0	1.7	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF87
AAA_25	PF13481.1	gi|297526787|ref|YP_003668811.1|	-	0.0068	15.8	0.0	0.055	12.8	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
NACHT	PF05729.7	gi|297526787|ref|YP_003668811.1|	-	0.0076	15.9	0.0	0.01	15.4	0.0	1.3	1	0	0	1	1	1	1	NACHT	domain
NB-ARC	PF00931.17	gi|297526787|ref|YP_003668811.1|	-	0.0094	14.8	0.6	0.039	12.8	0.0	1.9	2	0	0	2	2	2	1	NB-ARC	domain
AAA_17	PF13207.1	gi|297526787|ref|YP_003668811.1|	-	0.011	16.5	0.0	0.049	14.4	0.0	2.0	2	1	0	2	2	2	0	AAA	domain
AAA_10	PF12846.2	gi|297526787|ref|YP_003668811.1|	-	0.016	14.6	0.0	0.04	13.3	0.0	1.6	1	1	0	1	1	1	0	AAA-like	domain
UPF0079	PF02367.12	gi|297526787|ref|YP_003668811.1|	-	0.019	14.5	0.0	0.035	13.7	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
PRK	PF00485.13	gi|297526787|ref|YP_003668811.1|	-	0.022	14.3	0.0	0.036	13.6	0.0	1.3	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
T2SE	PF00437.15	gi|297526787|ref|YP_003668811.1|	-	0.023	13.5	0.1	0.032	13.1	0.1	1.2	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA_23	PF13476.1	gi|297526787|ref|YP_003668811.1|	-	0.024	14.9	0.0	0.03	14.6	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|297526787|ref|YP_003668811.1|	-	0.039	14.1	0.0	0.39	10.9	0.0	2.1	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_5	PF07728.9	gi|297526787|ref|YP_003668811.1|	-	0.042	13.5	0.0	0.07	12.8	0.0	1.4	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
CbiA	PF01656.18	gi|297526787|ref|YP_003668811.1|	-	0.067	12.5	0.0	0.11	11.8	0.0	1.3	1	0	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Sigma54_activat	PF00158.21	gi|297526787|ref|YP_003668811.1|	-	0.079	12.4	0.0	0.12	11.8	0.0	1.2	1	0	0	1	1	1	0	Sigma-54	interaction	domain
DUF258	PF03193.11	gi|297526787|ref|YP_003668811.1|	-	0.09	11.9	0.0	0.15	11.2	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_24	PF13479.1	gi|297526787|ref|YP_003668811.1|	-	0.093	12.2	0.0	0.16	11.5	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
oligo_HPY	PF08352.7	gi|297526788|ref|YP_003668812.1|	-	3.8e-21	75.2	0.1	6.7e-21	74.4	0.1	1.4	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
ABC_tran	PF00005.22	gi|297526788|ref|YP_003668812.1|	-	1.8e-20	73.6	0.0	2.5e-20	73.1	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297526788|ref|YP_003668812.1|	-	9.9e-12	45.4	0.3	2.4e-08	34.3	0.1	2.2	1	1	0	2	2	2	2	AAA	domain
AAA_22	PF13401.1	gi|297526788|ref|YP_003668812.1|	-	1.6e-07	31.5	0.0	5.7e-07	29.7	0.0	1.7	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|297526788|ref|YP_003668812.1|	-	0.00015	20.9	0.2	0.02	13.9	0.0	2.1	2	0	0	2	2	2	1	AAA	ATPase	domain
NACHT	PF05729.7	gi|297526788|ref|YP_003668812.1|	-	0.00028	20.5	0.4	0.012	15.2	0.1	2.2	2	0	0	2	2	2	1	NACHT	domain
AAA_13	PF13166.1	gi|297526788|ref|YP_003668812.1|	-	0.00055	18.5	0.3	0.0011	17.5	0.0	1.5	2	0	0	2	2	2	1	AAA	domain
NB-ARC	PF00931.17	gi|297526788|ref|YP_003668812.1|	-	0.0099	14.7	0.1	0.024	13.4	0.0	1.6	2	0	0	2	2	2	1	NB-ARC	domain
AAA_16	PF13191.1	gi|297526788|ref|YP_003668812.1|	-	0.018	15.0	0.0	0.034	14.1	0.0	1.4	1	0	0	1	1	1	0	AAA	ATPase	domain
SMC_N	PF02463.14	gi|297526788|ref|YP_003668812.1|	-	0.025	13.7	0.0	0.039	13.1	0.0	1.3	1	0	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
PduV-EutP	PF10662.4	gi|297526788|ref|YP_003668812.1|	-	0.031	13.7	0.1	0.066	12.6	0.1	1.5	1	0	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
DUF258	PF03193.11	gi|297526788|ref|YP_003668812.1|	-	0.053	12.7	0.0	0.088	11.9	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_29	PF13555.1	gi|297526788|ref|YP_003668812.1|	-	0.063	12.8	0.0	0.12	11.9	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
PRK	PF00485.13	gi|297526788|ref|YP_003668812.1|	-	0.071	12.6	0.0	0.11	11.9	0.0	1.3	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
Miro	PF08477.8	gi|297526788|ref|YP_003668812.1|	-	0.082	13.4	0.0	0.18	12.3	0.0	1.6	1	0	0	1	1	1	0	Miro-like	protein
ATP-synt_ab	PF00006.20	gi|297526788|ref|YP_003668812.1|	-	0.083	12.3	0.0	0.12	11.8	0.0	1.4	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
Arch_ATPase	PF01637.13	gi|297526788|ref|YP_003668812.1|	-	0.085	12.5	0.0	0.16	11.6	0.0	1.4	1	0	0	1	1	1	0	Archaeal	ATPase
MobB	PF03205.9	gi|297526788|ref|YP_003668812.1|	-	0.09	12.4	0.1	0.15	11.7	0.0	1.3	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Septin	PF00735.13	gi|297526788|ref|YP_003668812.1|	-	0.12	11.4	0.0	0.23	10.4	0.0	1.4	1	0	0	1	1	1	0	Septin
Rad17	PF03215.10	gi|297526788|ref|YP_003668812.1|	-	0.15	10.6	0.0	0.24	10.0	0.0	1.2	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
RNA_helicase	PF00910.17	gi|297526788|ref|YP_003668812.1|	-	0.15	12.2	0.0	0.3	11.2	0.0	1.4	1	0	0	1	1	1	0	RNA	helicase
BPD_transp_1	PF00528.17	gi|297526789|ref|YP_003668813.1|	-	3.1e-20	72.4	22.2	3.1e-20	72.4	15.4	2.2	2	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.2	gi|297526789|ref|YP_003668813.1|	-	1.8e-06	27.2	0.4	1.8e-06	27.2	0.3	3.4	4	1	1	5	5	5	1	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
BPD_transp_1	PF00528.17	gi|297526790|ref|YP_003668814.1|	-	1.3e-36	125.8	13.7	1.3e-36	125.8	9.5	2.4	2	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
PHO4	PF01384.15	gi|297526790|ref|YP_003668814.1|	-	1.8	7.1	10.0	3.7	6.0	6.9	1.7	1	1	0	1	1	1	0	Phosphate	transporter	family
SBP_bac_5	PF00496.17	gi|297526791|ref|YP_003668815.1|	-	8.7e-62	209.0	7.2	8.7e-62	209.0	5.0	1.6	2	0	0	2	2	2	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
Rifin_STEVOR	PF02009.11	gi|297526791|ref|YP_003668815.1|	-	0.032	13.8	0.2	0.049	13.2	0.1	1.2	1	0	0	1	1	1	0	Rifin/stevor	family
m04gp34like	PF12216.3	gi|297526791|ref|YP_003668815.1|	-	0.08	12.2	0.6	0.16	11.2	0.4	1.5	1	0	0	1	1	1	0	Immune	evasion	protein
Herpes_gE	PF02480.11	gi|297526791|ref|YP_003668815.1|	-	0.16	10.1	4.3	0.24	9.6	3.0	1.2	1	0	0	1	1	1	0	Alphaherpesvirus	glycoprotein	E
TMEM154	PF15102.1	gi|297526791|ref|YP_003668815.1|	-	1.6	8.4	12.7	2	8.0	7.6	2.1	2	0	0	2	2	2	0	TMEM154	protein	family
DUF3753	PF12575.3	gi|297526791|ref|YP_003668815.1|	-	4.9	7.0	9.2	0.24	11.2	1.3	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3753)
DUF485	PF04341.7	gi|297526791|ref|YP_003668815.1|	-	6.1	6.6	8.4	1.3	8.7	1.8	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF485
Glyco_hydro_1	PF00232.13	gi|297526792|ref|YP_003668816.1|	-	3.6e-61	206.7	3.3	2.2e-51	174.4	0.1	2.6	2	1	0	2	2	2	2	Glycosyl	hydrolase	family	1
Peptidase_M32	PF02074.10	gi|297526794|ref|YP_003668818.1|	-	6.9e-202	671.4	10.0	8e-202	671.2	6.9	1.0	1	0	0	1	1	1	1	Carboxypeptidase	Taq	(M32)	metallopeptidase
CorA	PF01544.13	gi|297526795|ref|YP_003668819.1|	-	2.9e-47	161.1	1.1	3.4e-47	160.8	0.7	1.0	1	0	0	1	1	1	1	CorA-like	Mg2+	transporter	protein
ACR_tran	PF00873.14	gi|297526795|ref|YP_003668819.1|	-	0.072	10.4	0.1	0.097	10.0	0.1	1.1	1	0	0	1	1	1	0	AcrB/AcrD/AcrF	family
DeoC	PF01791.4	gi|297526796|ref|YP_003668820.1|	-	1.9e-32	112.4	0.0	2.4e-32	112.1	0.0	1.1	1	0	0	1	1	1	1	DeoC/LacD	family	aldolase
PcrB	PF01884.12	gi|297526796|ref|YP_003668820.1|	-	0.0088	15.3	0.3	2.5	7.2	0.0	2.4	2	0	0	2	2	2	2	PcrB	family
PA	PF02225.17	gi|297526796|ref|YP_003668820.1|	-	0.09	12.4	0.0	0.26	11.0	0.0	1.8	2	0	0	2	2	2	0	PA	domain
FMN_dh	PF01070.13	gi|297526796|ref|YP_003668820.1|	-	0.21	10.3	1.7	0.62	8.8	0.0	2.3	3	0	0	3	3	3	0	FMN-dependent	dehydrogenase
MFS_1	PF07690.11	gi|297526797|ref|YP_003668821.1|	-	6.3e-15	54.7	34.9	8.8e-15	54.2	24.2	1.1	1	0	0	1	1	1	1	Major	Facilitator	Superfamily
NADHdh_A3	PF14987.1	gi|297526797|ref|YP_003668821.1|	-	1.9	8.4	5.0	5.9	6.8	0.0	2.9	3	0	0	3	3	3	0	NADH	dehydrogenase	1	alpha	subcomplex	subunit	3
MoeA_N	PF03453.12	gi|297526800|ref|YP_003668824.1|	-	5.2e-36	123.4	0.0	7.2e-36	122.9	0.0	1.2	1	0	0	1	1	1	1	MoeA	N-terminal	region	(domain	I	and	II)
MoCF_biosynth	PF00994.19	gi|297526800|ref|YP_003668824.1|	-	2.4e-13	49.6	0.0	3.8e-13	49.0	0.0	1.3	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
MoeA_C	PF03454.10	gi|297526800|ref|YP_003668824.1|	-	4.7e-05	23.2	0.0	0.0012	18.7	0.0	2.5	2	0	0	2	2	2	1	MoeA	C-terminal	region	(domain	IV)
DUF364	PF04016.7	gi|297526801|ref|YP_003668825.1|	-	2.3e-08	33.4	0.0	3.7e-08	32.7	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF364)
Aminotran_3	PF00202.16	gi|297526803|ref|YP_003668827.1|	-	2.9e-97	325.5	0.0	3.4e-97	325.3	0.0	1.0	1	0	0	1	1	1	1	Aminotransferase	class-III
Pex24p	PF06398.6	gi|297526804|ref|YP_003668828.1|	-	0.055	12.2	1.3	0.075	11.8	0.9	1.2	1	0	0	1	1	1	0	Integral	peroxisomal	membrane	peroxin
Sigma_reg_N	PF13800.1	gi|297526804|ref|YP_003668828.1|	-	0.75	9.8	3.6	1.7	8.6	2.5	1.5	1	0	0	1	1	1	0	Sigma	factor	regulator	N-terminal
ATP-synt_8	PF00895.15	gi|297526804|ref|YP_003668828.1|	-	1	9.6	6.3	2.4	8.4	4.4	1.6	1	0	0	1	1	1	0	ATP	synthase	protein	8
tRNA-synt_1d	PF00750.14	gi|297526805|ref|YP_003668829.1|	-	1.5e-39	135.8	8.1	2.2e-21	76.0	2.0	2.2	1	1	1	2	2	2	2	tRNA	synthetases	class	I	(R)
DALR_1	PF05746.10	gi|297526805|ref|YP_003668829.1|	-	6.3e-14	51.9	0.1	2e-13	50.3	0.1	2.0	1	0	0	1	1	1	1	DALR	anticodon	binding	domain
Arg_tRNA_synt_N	PF03485.11	gi|297526805|ref|YP_003668829.1|	-	1.7e-05	25.2	0.0	0.00013	22.4	0.0	2.4	2	0	0	2	2	2	1	Arginyl	tRNA	synthetase	N	terminal	domain
MoaC	PF01967.16	gi|297526806|ref|YP_003668830.1|	-	6.7e-50	168.2	2.8	7.6e-50	168.1	2.0	1.0	1	0	0	1	1	1	1	MoaC	family
Radical_SAM	PF04055.16	gi|297526807|ref|YP_003668831.1|	-	8.7e-21	74.7	0.0	1.3e-20	74.2	0.0	1.3	1	0	0	1	1	1	1	Radical	SAM	superfamily
Mob_synth_C	PF06463.8	gi|297526807|ref|YP_003668831.1|	-	2.8e-17	62.5	0.0	4.2e-17	62.0	0.0	1.3	1	0	0	1	1	1	1	Molybdenum	Cofactor	Synthesis	C
Fer4_12	PF13353.1	gi|297526807|ref|YP_003668831.1|	-	5.8e-06	26.4	0.1	1.4e-05	25.2	0.1	1.7	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|297526807|ref|YP_003668831.1|	-	1.3e-05	25.2	0.1	4.8e-05	23.3	0.1	1.9	1	1	0	1	1	1	1	4Fe-4S	single	cluster	domain
Pterin_bind	PF00809.17	gi|297526807|ref|YP_003668831.1|	-	0.018	14.4	0.1	4	6.7	0.1	2.2	2	0	0	2	2	2	0	Pterin	binding	enzyme
DUF4346	PF14251.1	gi|297526808|ref|YP_003668832.1|	-	9.3e-05	22.1	0.2	0.0052	16.5	0.0	2.6	1	1	1	2	2	2	2	Domain	of	unknown	function	(DUF4346)
AFOR_N	PF02730.10	gi|297526809|ref|YP_003668833.1|	-	4.8e-30	104.4	0.3	8.7e-30	103.5	0.1	1.5	2	0	0	2	2	2	1	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
AFOR_C	PF01314.13	gi|297526809|ref|YP_003668833.1|	-	1.1e-14	53.9	0.0	2.9e-14	52.5	0.0	1.6	2	0	0	2	2	2	1	Aldehyde	ferredoxin	oxidoreductase,	domains	2	&	3
SpoVA	PF03862.8	gi|297526810|ref|YP_003668834.1|	-	0.02	15.0	0.2	0.034	14.2	0.1	1.4	1	0	0	1	1	1	0	SpoVA	protein
DUF3139	PF11337.3	gi|297526810|ref|YP_003668834.1|	-	0.032	14.5	1.2	0.065	13.5	0.1	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3139)
Sigma_reg_N	PF13800.1	gi|297526810|ref|YP_003668834.1|	-	1.7	8.7	6.1	0.27	11.2	1.3	1.8	2	0	0	2	2	2	0	Sigma	factor	regulator	N-terminal
FeoB_N	PF02421.13	gi|297526811|ref|YP_003668835.1|	-	3.6e-52	175.7	0.0	6.1e-52	175.0	0.0	1.4	1	0	0	1	1	1	1	Ferrous	iron	transport	protein	B
Gate	PF07670.9	gi|297526811|ref|YP_003668835.1|	-	3.8e-28	97.5	31.4	1.7e-19	69.7	8.5	3.1	3	1	0	3	3	3	2	Nucleoside	recognition
MMR_HSR1	PF01926.18	gi|297526811|ref|YP_003668835.1|	-	1.2e-18	67.1	0.0	2.3e-18	66.2	0.0	1.5	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
GTP_EFTU	PF00009.22	gi|297526811|ref|YP_003668835.1|	-	7.3e-08	32.0	0.0	4.6e-06	26.1	0.0	2.4	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
AIG1	PF04548.11	gi|297526811|ref|YP_003668835.1|	-	3.6e-07	29.4	0.0	6.4e-07	28.6	0.0	1.4	1	0	0	1	1	1	1	AIG1	family
FeoB_C	PF07664.7	gi|297526811|ref|YP_003668835.1|	-	6.6e-05	22.2	0.5	6.6e-05	22.2	0.3	3.4	5	0	0	5	5	3	1	Ferrous	iron	transport	protein	B	C	terminus
Dynamin_N	PF00350.18	gi|297526811|ref|YP_003668835.1|	-	0.00024	20.9	0.2	0.19	11.5	0.0	2.5	2	0	0	2	2	2	2	Dynamin	family
Miro	PF08477.8	gi|297526811|ref|YP_003668835.1|	-	0.0046	17.4	0.0	0.0082	16.6	0.0	1.5	1	0	0	1	1	1	1	Miro-like	protein
PduV-EutP	PF10662.4	gi|297526811|ref|YP_003668835.1|	-	0.011	15.2	0.0	0.076	12.5	0.0	2.2	1	1	0	1	1	1	0	Ethanolamine	utilisation	-	propanediol	utilisation
SRPRB	PF09439.5	gi|297526811|ref|YP_003668835.1|	-	0.08	12.1	0.0	0.14	11.3	0.0	1.3	1	0	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
DUF258	PF03193.11	gi|297526811|ref|YP_003668835.1|	-	0.23	10.6	0.0	0.44	9.7	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
FeoA	PF04023.9	gi|297526812|ref|YP_003668836.1|	-	9.5e-19	67.1	0.4	1e-18	67.0	0.3	1.0	1	0	0	1	1	1	1	FeoA	domain
SNARE_assoc	PF09335.6	gi|297526813|ref|YP_003668837.1|	-	3.8e-13	49.7	4.8	3.8e-13	49.7	3.4	2.6	2	1	1	3	3	3	1	SNARE	associated	Golgi	protein
Sm_multidrug_ex	PF06695.6	gi|297526813|ref|YP_003668837.1|	-	3.6	7.7	10.8	6.8	6.8	0.4	3.3	1	1	2	4	4	4	0	Putative	small	multi-drug	export	protein
DSPc	PF00782.15	gi|297526814|ref|YP_003668838.1|	-	5.5e-12	45.4	0.0	9.4e-12	44.6	0.0	1.4	1	0	0	1	1	1	1	Dual	specificity	phosphatase,	catalytic	domain
CDKN3	PF05706.7	gi|297526814|ref|YP_003668838.1|	-	7e-05	22.3	0.0	0.00014	21.3	0.0	1.4	1	0	0	1	1	1	1	Cyclin-dependent	kinase	inhibitor	3	(CDKN3)
Y_phosphatase	PF00102.22	gi|297526814|ref|YP_003668838.1|	-	0.019	14.3	0.0	0.03	13.6	0.0	1.4	1	0	0	1	1	1	0	Protein-tyrosine	phosphatase
PTPlike_phytase	PF14566.1	gi|297526814|ref|YP_003668838.1|	-	0.045	13.7	0.0	0.14	12.1	0.0	1.9	2	0	0	2	2	2	0	Inositol	hexakisphosphate
DUF4441	PF14536.1	gi|297526814|ref|YP_003668838.1|	-	0.07	13.1	1.7	0.44	10.5	0.2	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4441)
AIRS	PF00586.19	gi|297526815|ref|YP_003668839.1|	-	4.3e-10	39.7	0.0	1e-09	38.4	0.0	1.6	1	0	0	1	1	1	1	AIR	synthase	related	protein,	N-terminal	domain
AIRS_C	PF02769.17	gi|297526815|ref|YP_003668839.1|	-	1.2e-08	35.1	0.0	2.1e-08	34.3	0.0	1.4	1	0	0	1	1	1	1	AIR	synthase	related	protein,	C-terminal	domain
TPR_1	PF00515.23	gi|297526817|ref|YP_003668841.1|	-	4.4e-08	32.3	19.5	0.015	14.8	3.4	6.0	5	0	0	5	5	5	2	Tetratricopeptide	repeat
TPR_2	PF07719.12	gi|297526817|ref|YP_003668841.1|	-	6.7e-08	31.8	29.4	0.0022	17.7	0.4	7.2	7	0	0	7	7	7	3	Tetratricopeptide	repeat
TPR_12	PF13424.1	gi|297526817|ref|YP_003668841.1|	-	5.5e-07	29.4	24.1	0.009	15.9	0.9	6.2	4	2	2	6	6	6	3	Tetratricopeptide	repeat
TPR_11	PF13414.1	gi|297526817|ref|YP_003668841.1|	-	8.8e-06	25.2	6.1	8.8e-06	25.2	4.2	4.1	4	1	0	4	4	4	1	TPR	repeat
TPR_16	PF13432.1	gi|297526817|ref|YP_003668841.1|	-	2.4e-05	24.8	2.7	0.0022	18.6	0.3	3.8	3	1	0	3	3	3	1	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|297526817|ref|YP_003668841.1|	-	0.00091	18.8	30.7	0.007	16.0	0.8	7.0	6	0	0	6	6	6	2	Tetratricopeptide	repeat
TPR_14	PF13428.1	gi|297526817|ref|YP_003668841.1|	-	0.011	16.2	1.5	27	5.7	0.0	4.5	4	0	0	4	4	4	0	Tetratricopeptide	repeat
TPR_19	PF14559.1	gi|297526817|ref|YP_003668841.1|	-	0.024	14.9	6.8	1.3	9.4	0.0	4.2	4	0	0	4	4	3	0	Tetratricopeptide	repeat
T2SE	PF00437.15	gi|297526817|ref|YP_003668841.1|	-	0.036	12.9	0.0	0.096	11.5	0.0	1.7	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
TPR_21	PF09976.4	gi|297526817|ref|YP_003668841.1|	-	0.15	11.9	1.2	3.1	7.7	0.6	2.8	3	0	0	3	3	3	0	Tetratricopeptide	repeat
Apc3	PF12895.2	gi|297526817|ref|YP_003668841.1|	-	0.26	11.4	19.2	0.11	12.6	1.6	5.8	4	3	2	6	6	6	0	Anaphase-promoting	complex,	cyclosome,	subunit	3
TPR_7	PF13176.1	gi|297526817|ref|YP_003668841.1|	-	0.78	9.6	9.9	0.61	10.0	0.1	4.7	5	0	0	5	5	5	0	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|297526817|ref|YP_003668841.1|	-	5.4	7.6	24.1	0.18	12.3	0.1	6.0	7	0	0	7	7	6	0	Tetratricopeptide	repeat
Lipase_2	PF01674.13	gi|297526818|ref|YP_003668842.1|	-	0.0093	15.2	0.3	0.012	14.9	0.2	1.1	1	0	0	1	1	1	1	Lipase	(class	2)
ABC2_membrane_3	PF12698.2	gi|297526818|ref|YP_003668842.1|	-	0.013	14.5	3.6	0.016	14.2	2.5	1.1	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
Rifin_STEVOR	PF02009.11	gi|297526818|ref|YP_003668842.1|	-	0.05	13.2	0.5	0.06	12.9	0.3	1.1	1	0	0	1	1	1	0	Rifin/stevor	family
DUF4199	PF13858.1	gi|297526818|ref|YP_003668842.1|	-	0.055	13.3	0.1	0.079	12.8	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4199)
DUF963	PF06131.6	gi|297526818|ref|YP_003668842.1|	-	0.1	11.8	5.7	0.17	11.1	4.0	1.3	1	0	0	1	1	1	0	Schizosaccharomyces	pombe	repeat	of	unknown	function	(DUF963)
MoeA_N	PF03453.12	gi|297526819|ref|YP_003668843.1|	-	1.1e-44	151.6	0.0	1.6e-44	151.1	0.0	1.2	1	0	0	1	1	1	1	MoeA	N-terminal	region	(domain	I	and	II)
MoCF_biosynth	PF00994.19	gi|297526819|ref|YP_003668843.1|	-	2e-28	98.6	0.0	3.1e-28	97.9	0.0	1.3	1	0	0	1	1	1	1	Probable	molybdopterin	binding	domain
MoeA_C	PF03454.10	gi|297526819|ref|YP_003668843.1|	-	3.7e-16	58.8	0.2	4.2e-15	55.4	0.0	2.8	3	0	0	3	3	3	1	MoeA	C-terminal	region	(domain	IV)
Lactamase_B_2	PF12706.2	gi|297526820|ref|YP_003668844.1|	-	9.3e-06	25.3	4.5	4.2e-05	23.1	3.1	1.9	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|297526820|ref|YP_003668844.1|	-	4.5e-05	23.1	3.5	0.00043	20.0	0.3	2.7	2	2	0	2	2	2	1	Metallo-beta-lactamase	superfamily
Lactamase_B_3	PF13483.1	gi|297526820|ref|YP_003668844.1|	-	0.0014	18.3	0.0	0.004	16.8	0.0	1.8	2	0	0	2	2	2	1	Beta-lactamase	superfamily	domain
NtA	PF03146.10	gi|297526820|ref|YP_003668844.1|	-	0.14	11.8	0.0	15	5.2	0.0	2.3	2	0	0	2	2	2	0	Agrin	NtA	domain
DHH	PF01368.15	gi|297526820|ref|YP_003668844.1|	-	0.17	11.5	1.0	0.74	9.4	0.1	2.0	2	0	0	2	2	2	0	DHH	family
Radical_SAM	PF04055.16	gi|297526821|ref|YP_003668845.1|	-	2.5e-21	76.5	0.0	7.4e-21	75.0	0.0	1.8	1	0	0	1	1	1	1	Radical	SAM	superfamily
Acetyltransf_1	PF00583.19	gi|297526821|ref|YP_003668845.1|	-	4.6e-07	29.7	0.1	1.1e-06	28.6	0.1	1.7	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
HobA	PF12163.3	gi|297526821|ref|YP_003668845.1|	-	0.031	13.5	0.0	0.051	12.8	0.0	1.2	1	0	0	1	1	1	0	DNA	replication	regulator
Acetyltransf_7	PF13508.1	gi|297526821|ref|YP_003668845.1|	-	0.038	14.1	0.2	0.22	11.7	0.2	2.2	1	1	0	1	1	1	0	Acetyltransferase	(GNAT)	domain
NTP_transf_2	PF01909.18	gi|297526822|ref|YP_003668846.1|	-	3.2e-11	43.3	0.8	4.1e-11	43.0	0.5	1.2	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
DUF294	PF03445.8	gi|297526822|ref|YP_003668846.1|	-	0.022	14.3	0.0	0.027	14.1	0.0	1.2	1	0	0	1	1	1	0	Putative	nucleotidyltransferase	DUF294
HEPN	PF05168.9	gi|297526823|ref|YP_003668847.1|	-	2.2e-26	92.0	0.9	2.6e-26	91.8	0.6	1.0	1	0	0	1	1	1	1	HEPN	domain
ABC2_membrane	PF01061.19	gi|297526824|ref|YP_003668848.1|	-	0.0038	16.4	6.0	0.0043	16.2	4.2	1.0	1	0	0	1	1	1	1	ABC-2	type	transporter
Phage_holin_5	PF06946.6	gi|297526824|ref|YP_003668848.1|	-	0.038	14.1	0.4	0.039	14.1	0.3	1.1	1	0	0	1	1	1	0	Phage	holin
MadM	PF03818.8	gi|297526824|ref|YP_003668848.1|	-	0.043	13.3	3.4	0.06	12.9	2.4	1.3	1	0	0	1	1	1	0	Malonate/sodium	symporter	MadM	subunit
Herpes_pp38	PF04846.8	gi|297526824|ref|YP_003668848.1|	-	0.047	13.0	1.2	0.049	12.9	0.8	1.2	1	0	0	1	1	1	0	Herpesvirus	pp38	phosphoprotein
Caveolin	PF01146.12	gi|297526824|ref|YP_003668848.1|	-	0.28	10.7	4.2	0.12	11.9	1.1	1.6	1	1	1	2	2	2	0	Caveolin
ABC2_membrane_3	PF12698.2	gi|297526824|ref|YP_003668848.1|	-	0.32	9.9	6.6	0.36	9.8	4.5	1.0	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
DUF2892	PF11127.3	gi|297526824|ref|YP_003668848.1|	-	0.6	9.9	3.4	0.74	9.6	2.4	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2892)
Zip	PF02535.17	gi|297526824|ref|YP_003668848.1|	-	0.64	8.9	3.0	0.66	8.9	2.1	1.0	1	0	0	1	1	1	0	ZIP	Zinc	transporter
ABC2_membrane_2	PF12679.2	gi|297526824|ref|YP_003668848.1|	-	0.69	8.7	4.8	0.73	8.6	3.3	1.0	1	0	0	1	1	1	0	ABC-2	family	transporter	protein
ApoL	PF05461.6	gi|297526824|ref|YP_003668848.1|	-	0.74	9.0	2.3	0.88	8.7	1.6	1.0	1	0	0	1	1	1	0	Apolipoprotein	L
YbgT_YccB	PF08173.6	gi|297526824|ref|YP_003668848.1|	-	3.2	7.6	4.6	1.2	9.0	0.7	2.0	2	0	0	2	2	2	0	Membrane	bound	YbgT-like	protein
Syntaxin-18_N	PF10496.4	gi|297526825|ref|YP_003668849.1|	-	0.03	14.1	0.1	0.05	13.4	0.0	1.4	1	0	0	1	1	1	0	SNARE-complex	protein	Syntaxin-18	N-terminus
DUF2067	PF09840.4	gi|297526825|ref|YP_003668849.1|	-	0.052	13.0	1.1	0.079	12.4	0.8	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2067)
Prominin	PF05478.6	gi|297526826|ref|YP_003668850.1|	-	0.087	10.3	2.9	0.1	10.1	2.0	1.1	1	0	0	1	1	1	0	Prominin
DUF766	PF05571.7	gi|297526826|ref|YP_003668850.1|	-	0.86	8.8	4.9	1.2	8.3	3.4	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF766)
Epimerase	PF01370.16	gi|297526827|ref|YP_003668851.1|	-	7.7e-67	225.1	0.0	9.2e-67	224.9	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
3Beta_HSD	PF01073.14	gi|297526827|ref|YP_003668851.1|	-	1e-25	90.0	0.0	1.3e-25	89.6	0.0	1.1	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
RmlD_sub_bind	PF04321.12	gi|297526827|ref|YP_003668851.1|	-	7e-22	77.6	0.0	9.8e-22	77.1	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Polysacc_synt_2	PF02719.10	gi|297526827|ref|YP_003668851.1|	-	4e-19	68.6	0.0	2.7e-18	65.8	0.0	2.0	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.7	gi|297526827|ref|YP_003668851.1|	-	1.3e-15	57.0	0.0	2e-13	49.8	0.0	2.1	1	1	0	1	1	1	1	Male	sterility	protein
NAD_binding_10	PF13460.1	gi|297526827|ref|YP_003668851.1|	-	2.4e-10	40.7	0.0	3.6e-10	40.1	0.0	1.4	1	1	0	1	1	1	1	NADH(P)-binding
adh_short	PF00106.20	gi|297526827|ref|YP_003668851.1|	-	1.1e-09	38.3	0.0	2e-09	37.6	0.0	1.4	1	0	0	1	1	1	1	short	chain	dehydrogenase
KR	PF08659.5	gi|297526827|ref|YP_003668851.1|	-	9.8e-07	28.6	0.0	3e-06	27.0	0.0	1.7	1	1	0	1	1	1	1	KR	domain
Epimerase_Csub	PF13950.1	gi|297526827|ref|YP_003668851.1|	-	1.4e-05	24.8	0.0	3.1e-05	23.8	0.0	1.5	1	0	0	1	1	1	1	UDP-glucose	4-epimerase	C-term	subunit
NmrA	PF05368.8	gi|297526827|ref|YP_003668851.1|	-	0.0036	16.5	0.0	0.3	10.2	0.0	2.7	2	1	0	2	2	2	1	NmrA-like	family
AAA_17	PF13207.1	gi|297526828|ref|YP_003668852.1|	-	1.9e-05	25.4	0.4	0.00028	21.7	0.2	2.4	1	1	1	2	2	2	1	AAA	domain
AAA_18	PF13238.1	gi|297526828|ref|YP_003668852.1|	-	2.8e-05	24.4	0.1	0.0023	18.2	0.0	2.6	2	1	0	2	2	2	1	AAA	domain
Thymidylate_kin	PF02223.12	gi|297526828|ref|YP_003668852.1|	-	0.00074	18.9	0.0	0.0022	17.4	0.0	1.7	2	0	0	2	2	2	1	Thymidylate	kinase
AAA_16	PF13191.1	gi|297526828|ref|YP_003668852.1|	-	0.0013	18.7	0.2	0.0066	16.4	0.0	2.0	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA	PF00004.24	gi|297526828|ref|YP_003668852.1|	-	0.0036	17.5	0.0	0.0089	16.2	0.0	1.8	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.1	gi|297526828|ref|YP_003668852.1|	-	0.0051	16.9	0.0	0.013	15.6	0.0	1.7	2	0	0	2	2	2	1	AAA	domain
APS_kinase	PF01583.15	gi|297526828|ref|YP_003668852.1|	-	0.0076	15.9	0.1	0.012	15.2	0.0	1.4	1	0	0	1	1	1	1	Adenylylsulphate	kinase
AAA_28	PF13521.1	gi|297526828|ref|YP_003668852.1|	-	0.0083	16.1	0.3	0.031	14.2	0.0	1.9	2	1	0	2	2	2	1	AAA	domain
AAA_5	PF07728.9	gi|297526828|ref|YP_003668852.1|	-	0.01	15.5	0.0	0.019	14.7	0.0	1.5	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
KTI12	PF08433.5	gi|297526828|ref|YP_003668852.1|	-	0.015	14.5	0.0	0.037	13.2	0.0	1.6	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
SRP54	PF00448.17	gi|297526828|ref|YP_003668852.1|	-	0.022	14.2	0.0	0.038	13.4	0.0	1.4	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
MobB	PF03205.9	gi|297526828|ref|YP_003668852.1|	-	0.023	14.4	0.0	0.039	13.6	0.0	1.4	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
LpxK	PF02606.9	gi|297526828|ref|YP_003668852.1|	-	0.025	13.5	0.0	0.041	12.8	0.0	1.2	1	0	0	1	1	1	0	Tetraacyldisaccharide-1-P	4'-kinase
RNA_helicase	PF00910.17	gi|297526828|ref|YP_003668852.1|	-	0.028	14.6	0.0	0.055	13.6	0.0	1.5	1	0	0	1	1	1	0	RNA	helicase
RuvB_N	PF05496.7	gi|297526828|ref|YP_003668852.1|	-	0.031	13.3	0.0	0.051	12.6	0.0	1.2	1	0	0	1	1	1	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
SKI	PF01202.17	gi|297526828|ref|YP_003668852.1|	-	0.037	13.8	0.4	0.67	9.8	0.0	2.3	2	1	0	2	2	2	0	Shikimate	kinase
PhoH	PF02562.11	gi|297526828|ref|YP_003668852.1|	-	0.047	12.9	0.2	5.4	6.1	0.0	2.1	2	0	0	2	2	2	0	PhoH-like	protein
UPF0079	PF02367.12	gi|297526828|ref|YP_003668852.1|	-	0.071	12.7	0.0	0.12	12.0	0.0	1.3	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
ATP-synt_ab	PF00006.20	gi|297526828|ref|YP_003668852.1|	-	0.076	12.5	0.0	0.076	12.5	0.0	1.2	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
CPT	PF07931.7	gi|297526828|ref|YP_003668852.1|	-	0.13	11.9	0.3	0.43	10.1	0.0	1.9	2	0	0	2	2	2	0	Chloramphenicol	phosphotransferase-like	protein
Sigma54_activ_2	PF14532.1	gi|297526828|ref|YP_003668852.1|	-	0.14	12.2	0.0	0.32	11.0	0.0	1.6	2	0	0	2	2	2	0	Sigma-54	interaction	domain
NTP_transf_5	PF14907.1	gi|297526829|ref|YP_003668853.1|	-	1.3e-06	27.9	0.0	3.7e-06	26.4	0.0	1.7	2	0	0	2	2	2	1	Uncharacterised	nucleotidyltransferase
DUF2095	PF09868.4	gi|297526829|ref|YP_003668853.1|	-	0.025	14.3	0.0	0.051	13.3	0.0	1.5	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2095)
PASTA	PF03793.14	gi|297526829|ref|YP_003668853.1|	-	0.15	11.7	0.0	0.64	9.7	0.0	1.9	2	0	0	2	2	2	0	PASTA	domain
Pyr_redox_2	PF07992.9	gi|297526830|ref|YP_003668854.1|	-	1.2e-26	93.8	0.0	2.4e-26	92.8	0.0	2.1	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|297526830|ref|YP_003668854.1|	-	8.4e-19	67.6	9.0	6.2e-06	25.3	0.0	4.1	3	1	1	4	4	4	4	FAD	dependent	oxidoreductase
Pyr_redox	PF00070.22	gi|297526830|ref|YP_003668854.1|	-	2.2e-17	63.1	8.1	2e-15	56.9	0.3	3.2	2	1	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|297526830|ref|YP_003668854.1|	-	3.1e-09	37.1	0.0	0.00078	19.5	0.0	3.2	2	1	1	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|297526830|ref|YP_003668854.1|	-	2.3e-08	33.9	3.2	0.00071	19.5	0.2	2.7	2	0	0	2	2	2	2	NAD(P)-binding	Rossmann-like	domain
HI0933_like	PF03486.9	gi|297526830|ref|YP_003668854.1|	-	4.1e-06	25.5	2.3	0.33	9.3	0.0	4.0	3	1	1	4	4	4	2	HI0933-like	protein
K_oxygenase	PF13434.1	gi|297526830|ref|YP_003668854.1|	-	5.8e-05	22.1	0.0	0.00022	20.2	0.0	1.9	3	0	0	3	3	3	1	L-lysine	6-monooxygenase	(NADPH-requiring)
FAD_binding_3	PF01494.14	gi|297526830|ref|YP_003668854.1|	-	0.0011	18.0	6.9	0.028	13.4	0.3	2.9	2	1	0	2	2	2	2	FAD	binding	domain
3HCDH_N	PF02737.13	gi|297526830|ref|YP_003668854.1|	-	0.0045	16.6	0.1	0.0045	16.6	0.0	1.6	2	0	0	2	2	2	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
NAD_binding_7	PF13241.1	gi|297526830|ref|YP_003668854.1|	-	0.0082	16.3	0.1	2.1	8.6	0.0	2.4	2	0	0	2	2	2	1	Putative	NAD(P)-binding
ApbA	PF02558.11	gi|297526830|ref|YP_003668854.1|	-	0.0084	15.5	4.2	0.038	13.4	0.2	2.3	2	0	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
Lycopene_cycl	PF05834.7	gi|297526830|ref|YP_003668854.1|	-	0.017	14.0	0.6	1.9	7.3	0.2	2.4	2	1	0	2	2	2	0	Lycopene	cyclase	protein
NAD_binding_9	PF13454.1	gi|297526830|ref|YP_003668854.1|	-	0.017	14.8	10.5	3.4	7.4	0.0	4.0	3	1	1	4	4	4	0	FAD-NAD(P)-binding
2-Hacid_dh_C	PF02826.14	gi|297526830|ref|YP_003668854.1|	-	0.019	14.1	0.1	1.6	7.8	0.0	2.2	2	0	0	2	2	2	0	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
NAD_Gly3P_dh_N	PF01210.18	gi|297526830|ref|YP_003668854.1|	-	0.02	14.6	0.8	0.026	14.2	0.0	1.6	2	0	0	2	2	1	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
UDPG_MGDP_dh_N	PF03721.9	gi|297526830|ref|YP_003668854.1|	-	0.052	12.9	0.2	0.052	12.9	0.1	1.6	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
F420_oxidored	PF03807.12	gi|297526830|ref|YP_003668854.1|	-	0.069	13.5	2.9	1.3	9.5	0.8	2.6	2	1	0	2	2	2	0	NADP	oxidoreductase	coenzyme	F420-dependent
TrkA_N	PF02254.13	gi|297526830|ref|YP_003668854.1|	-	0.15	12.0	3.1	0.2	11.6	0.2	2.5	2	0	0	2	2	2	0	TrkA-N	domain
FAD_binding_2	PF00890.19	gi|297526830|ref|YP_003668854.1|	-	0.26	10.0	8.5	1.6	7.4	0.4	3.8	3	1	1	4	4	4	0	FAD	binding	domain
Trp_halogenase	PF04820.9	gi|297526830|ref|YP_003668854.1|	-	0.28	9.7	0.7	3.9	5.9	0.0	2.1	2	0	0	2	2	2	0	Tryptophan	halogenase
ThiF	PF00899.16	gi|297526830|ref|YP_003668854.1|	-	1.4	8.7	4.1	9.3	6.0	0.4	2.4	2	0	0	2	2	2	0	ThiF	family
Thi4	PF01946.12	gi|297526830|ref|YP_003668854.1|	-	1.4	7.9	3.5	18	4.3	0.0	2.8	2	1	1	3	3	3	0	Thi4	family
Fer4_11	PF13247.1	gi|297526831|ref|YP_003668855.1|	-	1.2e-18	66.8	18.8	1.9e-18	66.1	10.0	2.1	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|297526831|ref|YP_003668855.1|	-	3.9e-18	64.4	36.3	7.5e-07	28.7	3.0	4.3	4	0	0	4	4	4	4	4Fe-4S	binding	domain
Fer4	PF00037.22	gi|297526831|ref|YP_003668855.1|	-	4.8e-18	63.9	42.0	7.5e-09	34.8	3.6	5.8	5	1	0	5	5	5	4	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|297526831|ref|YP_003668855.1|	-	1.8e-17	63.4	26.0	1.2e-09	38.4	8.9	3.2	3	0	0	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|297526831|ref|YP_003668855.1|	-	2.4e-16	59.2	53.6	9.8e-08	31.6	8.1	3.1	1	1	3	4	4	4	4	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|297526831|ref|YP_003668855.1|	-	2.2e-15	56.6	53.5	2.1e-08	34.3	9.0	3.1	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|297526831|ref|YP_003668855.1|	-	2.2e-13	49.2	32.3	9.7e-06	25.2	1.5	4.3	4	0	0	4	4	4	4	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|297526831|ref|YP_003668855.1|	-	2.2e-10	40.2	31.5	1.6e-05	24.6	8.1	2.7	1	1	1	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|297526831|ref|YP_003668855.1|	-	3.9e-10	39.5	42.1	0.0015	18.9	3.4	4.4	4	1	0	4	4	4	4	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|297526831|ref|YP_003668855.1|	-	2.5e-09	37.7	23.7	0.031	14.9	1.9	4.3	3	1	1	4	4	4	4	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.2	gi|297526831|ref|YP_003668855.1|	-	3.8e-07	29.8	36.0	0.002	18.3	2.0	4.8	4	1	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|297526831|ref|YP_003668855.1|	-	6.9e-07	29.2	27.6	0.00082	19.3	6.0	3.3	1	1	3	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|297526831|ref|YP_003668855.1|	-	2.7e-06	27.6	27.3	0.15	12.3	0.5	4.1	2	1	2	4	4	4	4	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|297526831|ref|YP_003668855.1|	-	0.00068	20.1	29.2	0.21	12.1	6.1	4.0	2	2	1	3	3	3	1	4Fe-4S	single	cluster	domain
Fer4_18	PF13746.1	gi|297526831|ref|YP_003668855.1|	-	0.017	15.5	31.2	0.075	13.4	0.3	4.2	3	1	1	4	4	4	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|297526831|ref|YP_003668855.1|	-	0.018	15.4	24.9	0.19	12.1	1.0	4.3	3	1	0	3	3	3	0	4Fe-4S	single	cluster	domain
Fer4_20	PF14691.1	gi|297526831|ref|YP_003668855.1|	-	0.43	10.2	27.8	0.046	13.3	2.0	4.1	1	1	3	4	4	4	0	Dihydroprymidine	dehydrogenase	domain	II,	4Fe-4S	cluster
GF_recep_IV	PF14843.1	gi|297526831|ref|YP_003668855.1|	-	1	9.0	17.0	0.13	11.8	7.5	2.1	2	0	0	2	2	2	0	Growth	factor	receptor	domain	IV
Fer4_5	PF12801.2	gi|297526831|ref|YP_003668855.1|	-	3.8	7.3	8.1	4.5	7.1	0.6	2.7	3	0	0	3	3	3	0	4Fe-4S	binding	domain
AFOR_C	PF01314.13	gi|297526832|ref|YP_003668856.1|	-	1.8e-78	263.9	0.1	2.4e-78	263.4	0.1	1.1	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	domains	2	&	3
AFOR_N	PF02730.10	gi|297526832|ref|YP_003668856.1|	-	7.6e-69	231.0	0.1	1.2e-68	230.4	0.1	1.3	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
DUF3502	PF12010.3	gi|297526832|ref|YP_003668856.1|	-	0.055	13.4	0.1	0.75	9.7	0.0	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3502)
RuBisCO_large_N	PF02788.11	gi|297526835|ref|YP_003668859.1|	-	0.0037	16.9	0.0	0.0054	16.4	0.0	1.2	1	0	0	1	1	1	1	Ribulose	bisphosphate	carboxylase	large	chain,	N-terminal	domain
SBP_bac_5	PF00496.17	gi|297526836|ref|YP_003668860.1|	-	2.4e-99	332.6	3.8	3.5e-99	332.1	2.6	1.3	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
PLDc_N	PF13396.1	gi|297526836|ref|YP_003668860.1|	-	0.0075	15.9	1.7	0.0075	15.9	1.2	1.8	2	0	0	2	2	2	1	Phospholipase_D-nuclease	N-terminal
DUF4097	PF13349.1	gi|297526836|ref|YP_003668860.1|	-	0.069	12.6	0.2	0.14	11.6	0.1	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4097)
EcsB	PF05975.7	gi|297526836|ref|YP_003668860.1|	-	0.12	10.8	0.0	0.18	10.2	0.0	1.2	1	0	0	1	1	1	0	Bacterial	ABC	transporter	protein	EcsB
BPD_transp_1	PF00528.17	gi|297526837|ref|YP_003668861.1|	-	2.1e-45	154.4	13.7	2.1e-45	154.4	9.5	2.1	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.17	gi|297526838|ref|YP_003668862.1|	-	7.2e-24	84.3	9.2	7.2e-24	84.3	6.4	2.1	2	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.2	gi|297526838|ref|YP_003668862.1|	-	2.3e-05	23.6	0.2	2.3e-05	23.6	0.2	4.3	5	0	0	5	5	5	2	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
Transglut_core	PF01841.14	gi|297526838|ref|YP_003668862.1|	-	0.18	12.0	0.1	12	6.1	0.0	2.2	2	0	0	2	2	2	0	Transglutaminase-like	superfamily
ABC_tran	PF00005.22	gi|297526839|ref|YP_003668863.1|	-	1.1e-32	113.2	0.0	1.5e-32	112.7	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|297526839|ref|YP_003668863.1|	-	1.3e-22	79.9	0.0	2.4e-22	79.0	0.0	1.5	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|297526839|ref|YP_003668863.1|	-	1.2e-12	48.3	0.1	4.4e-09	36.7	0.0	2.2	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|297526839|ref|YP_003668863.1|	-	2e-05	23.9	0.3	0.02	14.1	0.0	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|297526839|ref|YP_003668863.1|	-	0.00055	19.4	0.0	0.001	18.5	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_10	PF12846.2	gi|297526839|ref|YP_003668863.1|	-	0.0006	19.3	0.1	0.25	10.7	0.0	2.2	2	0	0	2	2	2	2	AAA-like	domain
AAA_25	PF13481.1	gi|297526839|ref|YP_003668863.1|	-	0.0013	18.2	0.1	0.0091	15.4	0.0	2.2	1	1	2	3	3	3	1	AAA	domain
ABC_ATPase	PF09818.4	gi|297526839|ref|YP_003668863.1|	-	0.0021	16.7	0.1	0.4	9.2	0.0	2.1	2	0	0	2	2	2	2	Predicted	ATPase	of	the	ABC	class
AAA_22	PF13401.1	gi|297526839|ref|YP_003668863.1|	-	0.0034	17.5	0.4	0.57	10.3	0.1	2.2	2	0	0	2	2	2	1	AAA	domain
T2SE	PF00437.15	gi|297526839|ref|YP_003668863.1|	-	0.0035	16.2	0.0	0.0049	15.8	0.0	1.2	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
DUF258	PF03193.11	gi|297526839|ref|YP_003668863.1|	-	0.019	14.1	0.0	0.056	12.6	0.0	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF258
AAA_16	PF13191.1	gi|297526839|ref|YP_003668863.1|	-	0.019	14.9	0.1	0.027	14.4	0.0	1.5	1	1	0	1	1	1	0	AAA	ATPase	domain
ATP-synt_ab	PF00006.20	gi|297526839|ref|YP_003668863.1|	-	0.04	13.4	0.1	0.46	9.9	0.1	2.6	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
NB-ARC	PF00931.17	gi|297526839|ref|YP_003668863.1|	-	0.049	12.4	0.0	0.078	11.8	0.0	1.2	1	0	0	1	1	1	0	NB-ARC	domain
MobB	PF03205.9	gi|297526839|ref|YP_003668863.1|	-	0.074	12.7	0.0	0.27	10.9	0.0	1.8	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Mg_chelatase	PF01078.16	gi|297526839|ref|YP_003668863.1|	-	0.079	12.1	0.0	0.57	9.2	0.0	2.0	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
AAA_15	PF13175.1	gi|297526839|ref|YP_003668863.1|	-	0.1	11.5	0.0	2.4	7.1	0.0	2.0	2	0	0	2	2	2	0	AAA	ATPase	domain
NACHT	PF05729.7	gi|297526839|ref|YP_003668863.1|	-	0.11	12.1	0.0	0.19	11.3	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
AAA_18	PF13238.1	gi|297526839|ref|YP_003668863.1|	-	0.12	12.7	0.3	0.41	10.9	0.1	2.1	2	1	0	2	2	2	0	AAA	domain
APS_kinase	PF01583.15	gi|297526839|ref|YP_003668863.1|	-	0.13	11.9	0.3	0.71	9.5	0.2	2.2	1	1	0	1	1	1	0	Adenylylsulphate	kinase
ABC_tran	PF00005.22	gi|297526840|ref|YP_003668864.1|	-	3.2e-34	118.1	0.0	4.3e-34	117.7	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|297526840|ref|YP_003668864.1|	-	4.1e-24	84.6	0.2	7.8e-24	83.8	0.2	1.5	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|297526840|ref|YP_003668864.1|	-	4.9e-05	23.4	0.1	0.027	14.4	0.0	2.2	1	1	1	2	2	2	2	AAA	domain
AAA_22	PF13401.1	gi|297526840|ref|YP_003668864.1|	-	0.00098	19.2	0.7	0.0084	16.2	0.5	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|297526840|ref|YP_003668864.1|	-	0.005	16.8	0.1	0.011	15.6	0.1	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
DUF61	PF01886.11	gi|297526840|ref|YP_003668864.1|	-	0.017	14.9	0.2	1.4	8.7	0.0	2.4	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF61
AAA	PF00004.24	gi|297526840|ref|YP_003668864.1|	-	0.019	15.1	0.0	0.041	14.0	0.0	1.5	1	0	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_29	PF13555.1	gi|297526840|ref|YP_003668864.1|	-	0.062	12.8	0.2	0.11	12.0	0.1	1.3	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_18	PF13238.1	gi|297526840|ref|YP_003668864.1|	-	0.066	13.5	0.0	0.17	12.1	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
AAA_5	PF07728.9	gi|297526840|ref|YP_003668864.1|	-	0.1	12.3	0.1	0.24	11.1	0.0	1.7	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
ATP-synt_ab	PF00006.20	gi|297526840|ref|YP_003668864.1|	-	0.12	11.8	0.0	0.17	11.3	0.0	1.2	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
DUF258	PF03193.11	gi|297526840|ref|YP_003668864.1|	-	0.13	11.4	0.0	0.2	10.8	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
KaiC	PF06745.8	gi|297526840|ref|YP_003668864.1|	-	0.14	11.3	0.6	2.6	7.0	0.1	2.3	2	0	0	2	2	2	0	KaiC
RHH_1	PF01402.16	gi|297526841|ref|YP_003668865.1|	-	1.3e-06	28.0	5.6	3.5e-06	26.6	0.6	2.9	1	1	1	3	3	3	1	Ribbon-helix-helix	protein,	copG	family
AAA_21	PF13304.1	gi|297526842|ref|YP_003668866.1|	-	7.3e-22	78.6	0.2	2.8e-20	73.4	0.1	2.3	1	1	0	1	1	1	1	AAA	domain
AAA_15	PF13175.1	gi|297526842|ref|YP_003668866.1|	-	4.2e-09	35.9	3.9	3e-08	33.1	0.0	3.0	1	1	1	2	2	2	1	AAA	ATPase	domain
DUF2813	PF11398.3	gi|297526842|ref|YP_003668866.1|	-	2.5e-05	23.5	0.5	0.049	12.7	0.0	2.3	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF2813)
AAA_23	PF13476.1	gi|297526842|ref|YP_003668866.1|	-	0.00048	20.5	1.0	0.0038	17.5	0.7	2.1	1	1	0	1	1	1	1	AAA	domain
SMC_N	PF02463.14	gi|297526842|ref|YP_003668866.1|	-	0.026	13.7	0.0	6.7	5.8	0.0	2.3	2	1	0	2	2	2	0	RecF/RecN/SMC	N	terminal	domain
MutS_I	PF01624.15	gi|297526843|ref|YP_003668867.1|	-	0.082	12.9	0.0	0.15	12.0	0.0	1.4	1	0	0	1	1	1	0	MutS	domain	I
NTP_transf_2	PF01909.18	gi|297526844|ref|YP_003668868.1|	-	2.4e-07	30.9	0.4	4e-07	30.2	0.2	1.3	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
Rep_fac_C	PF08542.6	gi|297526844|ref|YP_003668868.1|	-	0.01	15.7	0.1	0.049	13.6	0.0	2.1	2	1	0	2	2	2	0	Replication	factor	C	C-terminal	domain
ABC_tran	PF00005.22	gi|297526845|ref|YP_003668869.1|	-	1.7e-28	99.6	0.0	2.2e-28	99.2	0.0	1.1	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297526845|ref|YP_003668869.1|	-	3.9e-06	27.0	0.9	9.3e-06	25.7	0.1	1.8	1	1	1	2	2	2	1	AAA	domain
IstB_IS21	PF01695.12	gi|297526845|ref|YP_003668869.1|	-	7.8e-05	22.1	0.0	0.0063	15.9	0.0	2.2	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
SbcCD_C	PF13558.1	gi|297526845|ref|YP_003668869.1|	-	0.00026	20.8	0.1	0.00085	19.1	0.1	1.9	1	1	0	1	1	1	1	Putative	exonuclease	SbcCD,	C	subunit
FtsK_SpoIIIE	PF01580.13	gi|297526845|ref|YP_003668869.1|	-	0.00026	20.5	0.0	0.0027	17.2	0.0	2.0	1	1	0	1	1	1	1	FtsK/SpoIIIE	family
AAA_22	PF13401.1	gi|297526845|ref|YP_003668869.1|	-	0.0029	17.7	1.8	0.27	11.3	0.2	2.6	1	1	1	2	2	2	1	AAA	domain
DEAD	PF00270.24	gi|297526845|ref|YP_003668869.1|	-	0.003	17.0	0.0	0.009	15.5	0.0	1.8	1	1	0	1	1	1	1	DEAD/DEAH	box	helicase
AAA_16	PF13191.1	gi|297526845|ref|YP_003668869.1|	-	0.0039	17.1	0.1	0.0048	16.8	0.0	1.4	1	1	0	1	1	1	1	AAA	ATPase	domain
T2SE	PF00437.15	gi|297526845|ref|YP_003668869.1|	-	0.0094	14.8	0.0	0.015	14.2	0.0	1.4	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
PhoH	PF02562.11	gi|297526845|ref|YP_003668869.1|	-	0.013	14.7	0.0	0.032	13.4	0.0	1.7	2	0	0	2	2	2	0	PhoH-like	protein
SMC_N	PF02463.14	gi|297526845|ref|YP_003668869.1|	-	0.025	13.8	0.1	0.059	12.5	0.1	1.6	1	1	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|297526845|ref|YP_003668869.1|	-	0.025	14.1	0.0	0.045	13.2	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
DUF258	PF03193.11	gi|297526845|ref|YP_003668869.1|	-	0.03	13.4	0.0	0.046	12.9	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_17	PF13207.1	gi|297526845|ref|YP_003668869.1|	-	0.037	14.8	0.7	0.11	13.2	0.5	2.0	1	1	0	1	1	1	0	AAA	domain
NACHT	PF05729.7	gi|297526845|ref|YP_003668869.1|	-	0.045	13.4	0.1	0.11	12.1	0.0	1.6	2	0	0	2	2	2	0	NACHT	domain
DUF2326	PF10088.4	gi|297526845|ref|YP_003668869.1|	-	0.046	13.3	0.1	0.078	12.6	0.0	1.4	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2326)
AAA_19	PF13245.1	gi|297526845|ref|YP_003668869.1|	-	0.086	12.6	0.0	0.18	11.5	0.0	1.5	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_5	PF07728.9	gi|297526845|ref|YP_003668869.1|	-	0.087	12.5	0.2	0.25	11.0	0.1	1.8	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
Mg_chelatase	PF01078.16	gi|297526845|ref|YP_003668869.1|	-	0.089	11.9	0.0	0.14	11.2	0.0	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_18	PF13238.1	gi|297526845|ref|YP_003668869.1|	-	0.26	11.6	1.6	1.3	9.3	1.1	2.2	1	1	0	1	1	1	0	AAA	domain
DUF3040	PF11239.3	gi|297526848|ref|YP_003668872.1|	-	7.3	6.7	9.6	20	5.3	6.7	1.8	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3040)
DUF1616	PF07760.6	gi|297526850|ref|YP_003668874.1|	-	2.6e-33	115.3	11.3	3.2e-33	115.1	7.9	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1616)
DUF4173	PF13777.1	gi|297526850|ref|YP_003668874.1|	-	0.033	13.4	1.7	0.044	13.0	1.2	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4173)
DUF4395	PF14340.1	gi|297526850|ref|YP_003668874.1|	-	0.084	12.9	2.5	0.15	12.1	1.6	1.6	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4395)
DUF1616	PF07760.6	gi|297526851|ref|YP_003668875.1|	-	5.4e-15	55.2	1.8	5.4e-15	55.2	1.3	1.5	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1616)
EzrA	PF06160.7	gi|297526851|ref|YP_003668875.1|	-	0.002	16.3	0.3	0.0034	15.6	0.0	1.5	1	1	0	1	1	1	1	Septation	ring	formation	regulator,	EzrA
DUF4044	PF13253.1	gi|297526851|ref|YP_003668875.1|	-	0.0038	16.3	3.0	0.0083	15.2	2.1	1.5	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4044)
T4-Gluco-transf	PF09198.5	gi|297526851|ref|YP_003668875.1|	-	0.068	12.5	1.5	0.49	9.7	0.1	2.8	2	0	0	2	2	2	0	Bacteriophage	T4	beta-glucosyltransferase
YfdX	PF10938.3	gi|297526851|ref|YP_003668875.1|	-	0.12	11.9	0.1	0.19	11.3	0.1	1.2	1	0	0	1	1	1	0	YfdX	protein
DUF58	PF01882.13	gi|297526852|ref|YP_003668876.1|	-	6.3e-14	51.8	0.0	1.1e-13	51.0	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF58
AAA_3	PF07726.6	gi|297526853|ref|YP_003668877.1|	-	5.6e-53	178.0	0.0	7.7e-53	177.5	0.0	1.2	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_5	PF07728.9	gi|297526853|ref|YP_003668877.1|	-	2.8e-17	62.7	0.0	4.2e-17	62.1	0.0	1.3	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
RuvB_N	PF05496.7	gi|297526853|ref|YP_003668877.1|	-	2.4e-09	36.5	0.0	9e-09	34.7	0.0	1.8	1	1	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
Sigma54_activat	PF00158.21	gi|297526853|ref|YP_003668877.1|	-	6.5e-08	32.2	0.0	3.6e-07	29.8	0.0	1.9	1	1	0	1	1	1	1	Sigma-54	interaction	domain
AAA	PF00004.24	gi|297526853|ref|YP_003668877.1|	-	8.9e-07	29.1	0.0	2.1e-06	27.9	0.0	1.7	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
MCM	PF00493.18	gi|297526853|ref|YP_003668877.1|	-	1.3e-06	27.4	0.0	2.1e-06	26.8	0.0	1.3	1	0	0	1	1	1	1	MCM2/3/5	family
Mg_chelatase	PF01078.16	gi|297526853|ref|YP_003668877.1|	-	3.3e-06	26.4	0.0	0.0078	15.3	0.0	2.2	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_17	PF13207.1	gi|297526853|ref|YP_003668877.1|	-	4.7e-06	27.4	0.0	7.9e-06	26.6	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|297526853|ref|YP_003668877.1|	-	9.2e-06	25.9	0.0	1.9e-05	25.0	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|297526853|ref|YP_003668877.1|	-	0.00019	21.4	0.0	0.0042	17.0	0.0	2.1	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|297526853|ref|YP_003668877.1|	-	0.00026	21.1	0.0	0.0021	18.2	0.0	2.2	1	1	0	1	1	1	1	AAA	domain
Sigma54_activ_2	PF14532.1	gi|297526853|ref|YP_003668877.1|	-	0.00029	20.8	0.0	0.00074	19.5	0.0	1.6	1	1	0	1	1	1	1	Sigma-54	interaction	domain
AAA_19	PF13245.1	gi|297526853|ref|YP_003668877.1|	-	0.00074	19.2	0.0	0.0016	18.1	0.0	1.5	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_23	PF13476.1	gi|297526853|ref|YP_003668877.1|	-	0.0073	16.6	0.0	0.011	16.1	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_11	PF13086.1	gi|297526853|ref|YP_003668877.1|	-	0.014	14.9	0.0	0.02	14.4	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
T2SE	PF00437.15	gi|297526853|ref|YP_003668877.1|	-	0.024	13.5	0.0	0.046	12.6	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
RNA_helicase	PF00910.17	gi|297526853|ref|YP_003668877.1|	-	0.03	14.5	0.0	0.05	13.7	0.0	1.5	1	0	0	1	1	1	0	RNA	helicase
NTPase_1	PF03266.10	gi|297526853|ref|YP_003668877.1|	-	0.03	14.0	0.1	0.064	12.9	0.0	1.5	1	0	0	1	1	1	0	NTPase
AAA_14	PF13173.1	gi|297526853|ref|YP_003668877.1|	-	0.032	14.1	0.0	0.071	13.0	0.0	1.6	1	1	0	1	1	1	0	AAA	domain
AAA_24	PF13479.1	gi|297526853|ref|YP_003668877.1|	-	0.08	12.5	0.0	0.13	11.8	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_33	PF13671.1	gi|297526853|ref|YP_003668877.1|	-	0.1	12.4	0.1	0.26	11.1	0.0	1.4	1	1	0	1	1	1	0	AAA	domain
AAA_28	PF13521.1	gi|297526853|ref|YP_003668877.1|	-	0.16	11.9	0.0	0.25	11.2	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_30	PF13604.1	gi|297526853|ref|YP_003668877.1|	-	0.17	11.4	0.0	0.44	10.0	0.0	1.6	2	0	0	2	2	2	0	AAA	domain
DUF4350	PF14258.1	gi|297526854|ref|YP_003668878.1|	-	6.8e-06	26.1	0.0	2e-05	24.7	0.0	1.9	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4350)
ABC_transp_aux	PF09822.4	gi|297526854|ref|YP_003668878.1|	-	0.0064	15.9	0.0	0.0094	15.4	0.0	1.2	1	0	0	1	1	1	1	ABC-type	uncharacterized	transport	system
MdoG	PF04349.7	gi|297526854|ref|YP_003668878.1|	-	0.053	11.7	0.0	0.07	11.3	0.0	1.1	1	0	0	1	1	1	0	Periplasmic	glucan	biosynthesis	protein,	MdoG
DUF4159	PF13709.1	gi|297526854|ref|YP_003668878.1|	-	0.14	11.2	0.0	0.24	10.5	0.0	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4159)
DUF4480	PF13715.1	gi|297526855|ref|YP_003668879.1|	-	8e-05	22.6	0.3	0.00031	20.7	0.0	2.1	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4480)
CarboxypepD_reg	PF13620.1	gi|297526855|ref|YP_003668879.1|	-	0.00054	19.9	0.1	0.0017	18.4	0.0	1.8	2	0	0	2	2	2	1	Carboxypeptidase	regulatory-like	domain
A2M_N	PF01835.14	gi|297526855|ref|YP_003668879.1|	-	0.045	14.0	0.0	0.097	12.9	0.0	1.5	1	0	0	1	1	1	0	MG2	domain
Reo_sigmaC	PF04582.7	gi|297526855|ref|YP_003668879.1|	-	0.37	9.9	3.2	0.28	10.3	0.4	1.9	2	0	0	2	2	2	0	Reovirus	sigma	C	capsid	protein
Glycos_transf_2	PF00535.21	gi|297526858|ref|YP_003668882.1|	-	1.8e-26	92.8	0.0	2.7e-26	92.2	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|297526858|ref|YP_003668882.1|	-	4.9e-13	49.4	0.0	6.7e-13	48.9	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_transf_21	PF13506.1	gi|297526858|ref|YP_003668882.1|	-	0.00021	20.6	0.0	0.00038	19.7	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_tranf_2_4	PF13704.1	gi|297526858|ref|YP_003668882.1|	-	0.007	16.6	0.0	0.017	15.4	0.0	1.7	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
WavE	PF07507.6	gi|297526858|ref|YP_003668882.1|	-	0.14	11.0	0.0	0.18	10.6	0.0	1.2	1	0	0	1	1	1	0	WavE	lipopolysaccharide	synthesis
DUF373	PF04123.8	gi|297526858|ref|YP_003668882.1|	-	3.8	6.4	6.1	1.9	7.3	0.2	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF373)
Polysacc_synt	PF01943.12	gi|297526859|ref|YP_003668883.1|	-	9.3e-06	25.1	33.9	9.3e-06	25.1	23.5	2.4	2	1	0	2	2	2	1	Polysaccharide	biosynthesis	protein
Polysacc_synt_C	PF14667.1	gi|297526859|ref|YP_003668883.1|	-	0.0019	17.9	65.6	0.005	16.6	15.0	4.3	3	2	1	4	4	4	2	Polysaccharide	biosynthesis	C-terminal	domain
Methyltransf_11	PF08241.7	gi|297526862|ref|YP_003668886.1|	-	4e-22	78.5	0.0	5.8e-22	77.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|297526862|ref|YP_003668886.1|	-	5.5e-17	61.7	0.1	1.4e-16	60.4	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|297526862|ref|YP_003668886.1|	-	4.6e-16	58.9	0.0	5.1e-16	58.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|297526862|ref|YP_003668886.1|	-	6.5e-10	39.3	0.0	1.2e-09	38.5	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|297526862|ref|YP_003668886.1|	-	2.2e-09	37.5	0.0	3.4e-09	36.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_8	PF05148.10	gi|297526862|ref|YP_003668886.1|	-	2.6e-08	33.7	0.0	3.8e-08	33.2	0.0	1.2	1	0	0	1	1	1	1	Hypothetical	methyltransferase
Methyltransf_18	PF12847.2	gi|297526862|ref|YP_003668886.1|	-	7.4e-08	32.9	0.1	2e-07	31.6	0.1	1.6	1	1	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|297526862|ref|YP_003668886.1|	-	2.3e-06	26.8	0.0	4.2e-06	26.0	0.0	1.4	1	1	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_26	PF13659.1	gi|297526862|ref|YP_003668886.1|	-	3e-05	24.0	0.0	0.00011	22.2	0.0	1.8	1	1	0	1	1	1	1	Methyltransferase	domain
DREV	PF05219.7	gi|297526862|ref|YP_003668886.1|	-	7.6e-05	21.7	0.0	0.00014	20.8	0.0	1.3	2	0	0	2	2	2	1	DREV	methyltransferase
MetW	PF07021.7	gi|297526862|ref|YP_003668886.1|	-	0.001	18.5	0.0	0.0016	17.8	0.0	1.2	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
RrnaAD	PF00398.15	gi|297526862|ref|YP_003668886.1|	-	0.0016	17.5	0.0	0.0027	16.7	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
MTS	PF05175.9	gi|297526862|ref|YP_003668886.1|	-	0.0022	17.4	0.0	0.03	13.7	0.0	2.1	1	1	0	1	1	1	1	Methyltransferase	small	domain
PrmA	PF06325.8	gi|297526862|ref|YP_003668886.1|	-	0.0055	15.8	0.0	0.0082	15.2	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_9	PF08003.6	gi|297526862|ref|YP_003668886.1|	-	0.015	13.9	0.0	0.026	13.2	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1698)
NNMT_PNMT_TEMT	PF01234.12	gi|297526862|ref|YP_003668886.1|	-	0.11	11.4	0.1	0.61	9.0	0.0	1.9	1	1	1	2	2	2	0	NNMT/PNMT/TEMT	family
CMAS	PF02353.15	gi|297526862|ref|YP_003668886.1|	-	0.11	11.5	0.0	0.16	11.0	0.0	1.2	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
Glycos_transf_2	PF00535.21	gi|297526863|ref|YP_003668887.1|	-	6.8e-30	103.9	0.0	1.1e-29	103.2	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|297526863|ref|YP_003668887.1|	-	4.7e-22	78.9	0.0	6.6e-22	78.4	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|297526863|ref|YP_003668887.1|	-	9.9e-09	35.1	0.3	1.9e-08	34.2	0.2	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_transf_21	PF13506.1	gi|297526863|ref|YP_003668887.1|	-	2.3e-07	30.2	0.0	5e-07	29.1	0.0	1.6	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_tranf_2_2	PF10111.4	gi|297526863|ref|YP_003668887.1|	-	3.8e-07	29.4	0.0	5.4e-07	28.9	0.0	1.3	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_tranf_2_4	PF13704.1	gi|297526863|ref|YP_003668887.1|	-	3.6e-05	24.0	0.1	6.6e-05	23.1	0.1	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_transf_4	PF13439.1	gi|297526865|ref|YP_003668889.1|	-	1.4e-08	34.6	0.1	1.5e-08	34.5	0.0	1.0	1	0	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_4_4	PF13579.1	gi|297526865|ref|YP_003668889.1|	-	6.8e-06	26.3	0.0	7.8e-06	26.1	0.0	1.1	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
Glyco_trans_4_2	PF13477.1	gi|297526865|ref|YP_003668889.1|	-	0.00011	22.0	0.0	0.00012	21.9	0.0	1.0	1	0	0	1	1	1	1	Glycosyl	transferase	4-like
Glyco_transf_5	PF08323.6	gi|297526865|ref|YP_003668889.1|	-	0.00066	19.2	0.0	0.00066	19.2	0.0	1.0	1	0	0	1	1	1	1	Starch	synthase	catalytic	domain
DFP	PF04127.10	gi|297526865|ref|YP_003668889.1|	-	0.16	11.5	0.0	0.17	11.4	0.0	1.0	1	0	0	1	1	1	0	DNA	/	pantothenate	metabolism	flavoprotein
Epimerase	PF01370.16	gi|297526866|ref|YP_003668890.1|	-	2.5e-58	197.3	0.9	4.8e-58	196.3	0.1	1.7	2	0	0	2	2	2	1	NAD	dependent	epimerase/dehydratase	family
3Beta_HSD	PF01073.14	gi|297526866|ref|YP_003668890.1|	-	7.1e-28	97.0	0.1	8.8e-28	96.7	0.0	1.1	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
Polysacc_synt_2	PF02719.10	gi|297526866|ref|YP_003668890.1|	-	2e-19	69.6	0.0	9.9e-19	67.3	0.0	1.8	1	1	0	1	1	1	1	Polysaccharide	biosynthesis	protein
RmlD_sub_bind	PF04321.12	gi|297526866|ref|YP_003668890.1|	-	8e-19	67.6	0.0	9.7e-19	67.3	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
NAD_binding_10	PF13460.1	gi|297526866|ref|YP_003668890.1|	-	2.3e-17	63.5	0.0	4.9e-17	62.5	0.0	1.5	1	1	0	1	1	1	1	NADH(P)-binding
NAD_binding_4	PF07993.7	gi|297526866|ref|YP_003668890.1|	-	2.2e-16	59.5	0.5	1.5e-15	56.8	0.4	2.0	1	1	0	1	1	1	1	Male	sterility	protein
adh_short	PF00106.20	gi|297526866|ref|YP_003668890.1|	-	9.4e-11	41.9	0.8	1.1e-09	38.4	0.5	2.1	1	1	0	1	1	1	1	short	chain	dehydrogenase
NmrA	PF05368.8	gi|297526866|ref|YP_003668890.1|	-	3.9e-09	36.0	0.0	1.3e-08	34.3	0.0	1.7	1	1	0	1	1	1	1	NmrA-like	family
KR	PF08659.5	gi|297526866|ref|YP_003668890.1|	-	0.00055	19.6	0.2	0.0027	17.3	0.1	2.2	1	1	0	1	1	1	1	KR	domain
TrkA_N	PF02254.13	gi|297526866|ref|YP_003668890.1|	-	0.058	13.4	0.0	0.13	12.2	0.0	1.6	1	0	0	1	1	1	0	TrkA-N	domain
CaMKII_AD	PF08332.5	gi|297526866|ref|YP_003668890.1|	-	0.062	13.1	0.0	0.23	11.3	0.0	1.8	2	0	0	2	2	2	0	Calcium/calmodulin	dependent	protein	kinase	II	Association
NAD_binding_2	PF03446.10	gi|297526866|ref|YP_003668890.1|	-	0.15	11.9	0.0	0.38	10.5	0.0	1.7	2	0	0	2	2	2	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
Glyco_transf_4	PF13439.1	gi|297526867|ref|YP_003668891.1|	-	2.8e-35	121.6	2.8	3.8e-35	121.2	1.0	1.8	2	1	0	2	2	2	1	Glycosyltransferase	Family	4
Glyco_trans_4_4	PF13579.1	gi|297526867|ref|YP_003668891.1|	-	2.4e-19	70.0	0.4	6.6e-19	68.6	0.3	1.7	2	0	0	2	2	2	1	Glycosyl	transferase	4-like	domain
Glycos_transf_1	PF00534.15	gi|297526867|ref|YP_003668891.1|	-	2.5e-13	49.8	0.0	5.3e-13	48.7	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|297526867|ref|YP_003668891.1|	-	1.6e-08	34.8	0.1	6.4e-07	29.5	0.0	2.8	2	1	1	3	3	3	1	Glycosyl	transferases	group	1
Glyco_transf_5	PF08323.6	gi|297526867|ref|YP_003668891.1|	-	0.00091	18.7	3.5	0.012	15.1	0.0	2.4	1	1	1	2	2	2	1	Starch	synthase	catalytic	domain
Glyco_trans_4_2	PF13477.1	gi|297526867|ref|YP_003668891.1|	-	0.003	17.4	0.1	0.012	15.4	0.0	2.1	2	0	0	2	2	2	1	Glycosyl	transferase	4-like
Glycos_transf_1	PF00534.15	gi|297526869|ref|YP_003668893.1|	-	2e-19	69.6	0.0	2.9e-19	69.1	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|297526869|ref|YP_003668893.1|	-	1.9e-09	37.7	0.0	3.2e-09	37.0	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Methyltransf_21	PF05050.7	gi|297526871|ref|YP_003668895.1|	-	5.8e-32	110.9	0.0	7.9e-32	110.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	FkbM	domain
Met_10	PF02475.11	gi|297526871|ref|YP_003668895.1|	-	6.5e-10	38.9	0.0	1.2e-09	38.0	0.0	1.4	1	0	0	1	1	1	1	Met-10+	like-protein
V_cholerae_RfbT	PF05575.6	gi|297526871|ref|YP_003668895.1|	-	1.6e-08	33.9	0.1	4.2e-08	32.5	0.1	1.6	1	1	0	1	1	1	1	Vibrio	cholerae	RfbT	protein
Methyltransf_18	PF12847.2	gi|297526871|ref|YP_003668895.1|	-	3.7e-06	27.5	0.0	7.1e-06	26.5	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_24	PF13578.1	gi|297526871|ref|YP_003668895.1|	-	0.00024	21.8	0.0	0.00058	20.6	0.0	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_16	PF10294.4	gi|297526871|ref|YP_003668895.1|	-	0.0015	17.9	0.0	0.0026	17.2	0.0	1.3	1	0	0	1	1	1	1	Putative	methyltransferase
Methyltransf_26	PF13659.1	gi|297526871|ref|YP_003668895.1|	-	0.016	15.2	0.0	0.022	14.8	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
PIG-L	PF02585.12	gi|297526871|ref|YP_003668895.1|	-	0.12	12.8	0.0	0.21	12.1	0.0	1.3	1	0	0	1	1	1	0	GlcNAc-PI	de-N-acetylase
PCMT	PF01135.14	gi|297526871|ref|YP_003668895.1|	-	0.14	11.6	0.0	0.23	10.9	0.0	1.2	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Glycos_transf_1	PF00534.15	gi|297526872|ref|YP_003668896.1|	-	4.2e-19	68.6	0.0	3.9e-18	65.4	0.0	2.2	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|297526872|ref|YP_003668896.1|	-	5.4e-11	42.7	0.0	1.3e-10	41.5	0.0	1.7	1	1	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|297526872|ref|YP_003668896.1|	-	0.053	13.7	0.0	0.18	12.0	0.0	1.9	1	1	0	1	1	1	0	Glycosyl	transferases	group	1
PCP_red	PF08369.5	gi|297526872|ref|YP_003668896.1|	-	0.13	12.1	0.0	0.29	11.0	0.0	1.5	1	0	0	1	1	1	0	Proto-chlorophyllide	reductase	57	kD	subunit
NYD-SP28_assoc	PF14775.1	gi|297526876|ref|YP_003668900.1|	-	0.076	12.7	0.7	0.18	11.5	0.5	1.7	1	0	0	1	1	1	0	Sperm	tail	C-terminal	domain
DUF2935	PF11155.3	gi|297526876|ref|YP_003668900.1|	-	0.084	12.9	0.2	0.14	12.2	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF2935)
HALZ	PF02183.13	gi|297526876|ref|YP_003668900.1|	-	0.22	11.2	3.9	0.15	11.7	0.9	2.0	2	0	0	2	2	2	0	Homeobox	associated	leucine	zipper
Sulfatase	PF00884.18	gi|297526877|ref|YP_003668901.1|	-	2.5e-19	69.6	0.0	7.5e-19	68.0	0.0	1.8	1	1	0	1	1	1	1	Sulfatase
Phosphodiest	PF01663.17	gi|297526877|ref|YP_003668901.1|	-	5.6e-05	22.6	0.1	0.0025	17.2	0.0	2.3	2	0	0	2	2	2	2	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
DUF229	PF02995.12	gi|297526877|ref|YP_003668901.1|	-	0.15	10.4	0.1	0.24	9.7	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF229)
Glycos_transf_1	PF00534.15	gi|297526878|ref|YP_003668902.1|	-	6.1e-11	42.0	0.0	1.1e-10	41.1	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|297526878|ref|YP_003668902.1|	-	3.1e-08	33.8	0.0	5.8e-08	32.9	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
MoeZ_MoeB	PF05237.8	gi|297526878|ref|YP_003668902.1|	-	0.12	12.0	0.1	0.22	11.1	0.1	1.4	1	0	0	1	1	1	0	MoeZ/MoeB	domain
Phosphodiest	PF01663.17	gi|297526879|ref|YP_003668903.1|	-	8.5e-29	101.0	0.0	1.2e-28	100.5	0.0	1.2	1	0	0	1	1	1	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
Polysacc_deac_1	PF01522.16	gi|297526880|ref|YP_003668904.1|	-	5.2e-20	71.3	0.0	9.7e-20	70.4	0.0	1.4	1	0	0	1	1	1	1	Polysaccharide	deacetylase
Glycos_transf_1	PF00534.15	gi|297526881|ref|YP_003668905.1|	-	1.3e-22	79.9	0.0	2.6e-22	79.0	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|297526881|ref|YP_003668905.1|	-	6.6e-16	58.6	0.2	2.3e-15	56.9	0.1	1.9	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glycos_transf_2	PF00535.21	gi|297526882|ref|YP_003668906.1|	-	6.4e-31	107.3	0.0	1.1e-30	106.5	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_tranf_2_3	PF13641.1	gi|297526882|ref|YP_003668906.1|	-	1.3e-25	90.5	0.0	2e-25	89.9	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|297526882|ref|YP_003668906.1|	-	9.8e-14	51.5	0.3	1.6e-13	50.8	0.2	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	group	2
Glyco_tranf_2_2	PF10111.4	gi|297526882|ref|YP_003668906.1|	-	7.5e-11	41.6	0.0	2.2e-10	40.1	0.0	1.7	1	1	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_transf_7C	PF02709.9	gi|297526882|ref|YP_003668906.1|	-	0.0058	16.0	0.0	0.011	15.1	0.0	1.5	1	0	0	1	1	1	1	N-terminal	domain	of	galactosyltransferase
dTDP_sugar_isom	PF00908.12	gi|297526883|ref|YP_003668907.1|	-	2.5e-72	241.9	0.0	2.8e-72	241.7	0.0	1.0	1	0	0	1	1	1	1	dTDP-4-dehydrorhamnose	3,5-epimerase
RmlD_sub_bind	PF04321.12	gi|297526884|ref|YP_003668908.1|	-	5e-87	291.4	0.0	5.9e-87	291.1	0.0	1.0	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
Epimerase	PF01370.16	gi|297526884|ref|YP_003668908.1|	-	6.4e-22	78.1	0.1	1.3e-21	77.1	0.0	1.5	1	1	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
Polysacc_synt_2	PF02719.10	gi|297526884|ref|YP_003668908.1|	-	7.4e-11	41.4	1.3	7.4e-11	41.4	0.9	2.2	2	1	0	2	2	2	1	Polysaccharide	biosynthesis	protein
NAD_binding_4	PF07993.7	gi|297526884|ref|YP_003668908.1|	-	2.3e-07	29.9	0.0	4.7e-07	28.9	0.0	1.4	1	1	0	1	1	1	1	Male	sterility	protein
NAD_binding_10	PF13460.1	gi|297526884|ref|YP_003668908.1|	-	0.0029	17.6	0.2	0.028	14.4	0.1	2.0	1	1	0	1	1	1	1	NADH(P)-binding
Epimerase	PF01370.16	gi|297526885|ref|YP_003668909.1|	-	1.5e-40	139.0	0.0	1.9e-40	138.7	0.0	1.1	1	0	0	1	1	1	1	NAD	dependent	epimerase/dehydratase	family
RmlD_sub_bind	PF04321.12	gi|297526885|ref|YP_003668909.1|	-	2.7e-17	62.6	0.0	3.6e-17	62.1	0.0	1.1	1	0	0	1	1	1	1	RmlD	substrate	binding	domain
3Beta_HSD	PF01073.14	gi|297526885|ref|YP_003668909.1|	-	1.1e-14	53.8	0.0	1.4e-14	53.4	0.0	1.1	1	0	0	1	1	1	1	3-beta	hydroxysteroid	dehydrogenase/isomerase	family
NAD_binding_10	PF13460.1	gi|297526885|ref|YP_003668909.1|	-	6.8e-13	49.0	0.0	8.6e-13	48.6	0.0	1.2	1	0	0	1	1	1	1	NADH(P)-binding
NAD_binding_4	PF07993.7	gi|297526885|ref|YP_003668909.1|	-	4.7e-08	32.2	0.5	0.00029	19.8	0.0	2.2	1	1	1	2	2	2	2	Male	sterility	protein
Polysacc_synt_2	PF02719.10	gi|297526885|ref|YP_003668909.1|	-	1.3e-07	30.8	0.0	1.6e-06	27.2	0.0	2.4	2	1	0	2	2	2	1	Polysaccharide	biosynthesis	protein
adh_short	PF00106.20	gi|297526885|ref|YP_003668909.1|	-	7.4e-05	22.7	0.0	0.0024	17.7	0.0	2.2	2	0	0	2	2	2	1	short	chain	dehydrogenase
NmrA	PF05368.8	gi|297526885|ref|YP_003668909.1|	-	0.00015	21.0	0.1	0.00096	18.4	0.0	2.2	1	1	0	2	2	2	1	NmrA-like	family
DAO	PF01266.19	gi|297526885|ref|YP_003668909.1|	-	0.0092	14.9	0.0	0.016	14.0	0.0	1.5	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
KR	PF08659.5	gi|297526885|ref|YP_003668909.1|	-	0.029	14.0	0.0	0.07	12.7	0.0	1.6	2	0	0	2	2	2	0	KR	domain
Semialdhyde_dh	PF01118.19	gi|297526885|ref|YP_003668909.1|	-	0.05	13.9	0.0	0.097	12.9	0.0	1.5	1	1	0	1	1	1	0	Semialdehyde	dehydrogenase,	NAD	binding	domain
UDPG_MGDP_dh_N	PF03721.9	gi|297526885|ref|YP_003668909.1|	-	0.051	12.9	0.2	0.096	12.0	0.2	1.4	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
NAD_binding_8	PF13450.1	gi|297526885|ref|YP_003668909.1|	-	0.11	12.4	0.1	0.42	10.6	0.1	1.9	1	0	0	1	1	1	0	NAD(P)-binding	Rossmann-like	domain
Acp26Ab	PF05777.7	gi|297526885|ref|YP_003668909.1|	-	0.14	12.6	0.0	0.26	11.7	0.0	1.4	1	0	0	1	1	1	0	Drosophila	accessory	gland-specific	peptide	26Ab	(Acp26Ab)
NTP_transferase	PF00483.18	gi|297526886|ref|YP_003668910.1|	-	1.3e-55	188.4	0.0	1.6e-55	188.1	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|297526886|ref|YP_003668910.1|	-	3.9e-09	36.7	0.0	5e-09	36.4	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
Hexapep	PF00132.19	gi|297526886|ref|YP_003668910.1|	-	2.1e-06	26.9	10.7	0.0017	17.7	1.4	4.9	3	1	2	5	5	5	3	Bacterial	transferase	hexapeptide	(six	repeats)
Fucokinase	PF07959.7	gi|297526886|ref|YP_003668910.1|	-	0.0046	15.5	0.1	0.0069	15.0	0.1	1.3	1	0	0	1	1	1	1	L-fucokinase
Hexapep_2	PF14602.1	gi|297526886|ref|YP_003668910.1|	-	0.61	9.6	5.6	0.67	9.5	1.4	2.8	1	1	1	2	2	2	0	Hexapeptide	repeat	of	succinyl-transferase
dTDP_sugar_isom	PF00908.12	gi|297526887|ref|YP_003668911.1|	-	2.4e-47	160.5	0.0	2.9e-47	160.2	0.0	1.0	1	0	0	1	1	1	1	dTDP-4-dehydrorhamnose	3,5-epimerase
Transp_cyt_pur	PF02133.10	gi|297526890|ref|YP_003668914.1|	-	8e-34	116.9	30.1	1e-33	116.5	20.9	1.1	1	0	0	1	1	1	1	Permease	for	cytosine/purines,	uracil,	thiamine,	allantoin
Antitoxin-MazE	PF04014.13	gi|297526891|ref|YP_003668915.1|	-	1.7e-11	43.5	1.8	2.3e-11	43.1	1.2	1.2	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
MraZ	PF02381.13	gi|297526891|ref|YP_003668915.1|	-	9.2e-05	22.1	0.1	0.00013	21.6	0.1	1.2	1	0	0	1	1	1	1	MraZ	protein
PIN	PF01850.16	gi|297526892|ref|YP_003668916.1|	-	1.9e-20	73.3	0.7	2.2e-20	73.1	0.5	1.1	1	0	0	1	1	1	1	PIN	domain
PIN_3	PF13470.1	gi|297526892|ref|YP_003668916.1|	-	5.7e-05	23.7	0.1	7.2e-05	23.4	0.0	1.0	1	0	0	1	1	1	1	PIN	domain
PIN_2	PF10130.4	gi|297526892|ref|YP_003668916.1|	-	0.021	14.8	0.1	0.024	14.6	0.1	1.1	1	0	0	1	1	1	0	PIN	domain
CcdA	PF07362.7	gi|297526893|ref|YP_003668917.1|	-	9.7e-07	28.5	0.6	1.2e-06	28.2	0.4	1.1	1	0	0	1	1	1	1	Post-segregation	antitoxin	CcdA
PSK_trans_fac	PF07704.6	gi|297526893|ref|YP_003668917.1|	-	0.078	13.6	0.7	0.087	13.5	0.5	1.2	1	0	0	1	1	1	0	Rv0623-like	transcription	factor
RHH_1	PF01402.16	gi|297526893|ref|YP_003668917.1|	-	0.22	11.4	2.1	0.36	10.8	1.0	1.8	2	0	0	2	2	2	0	Ribbon-helix-helix	protein,	copG	family
HEPN	PF05168.9	gi|297526895|ref|YP_003668919.1|	-	9.6e-23	80.3	0.4	1.2e-22	80.0	0.3	1.1	1	0	0	1	1	1	1	HEPN	domain
DUF1771	PF08590.5	gi|297526895|ref|YP_003668919.1|	-	0.0049	16.8	0.2	0.009	16.0	0.2	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1771)
TPR_11	PF13414.1	gi|297526895|ref|YP_003668919.1|	-	0.11	12.2	0.1	0.19	11.4	0.0	1.5	2	0	0	2	2	2	0	TPR	repeat
TPR_12	PF13424.1	gi|297526895|ref|YP_003668919.1|	-	0.24	11.3	1.7	0.43	10.5	0.2	2.1	2	0	0	2	2	2	0	Tetratricopeptide	repeat
NTP_transf_2	PF01909.18	gi|297526896|ref|YP_003668920.1|	-	1.5e-12	47.7	0.0	1.8e-12	47.4	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
DNA_pol_B_palm	PF14792.1	gi|297526896|ref|YP_003668920.1|	-	0.00037	20.5	0.0	0.00047	20.1	0.0	1.3	1	1	0	1	1	1	1	DNA	polymerase	beta	palm
MdcG	PF10620.4	gi|297526896|ref|YP_003668920.1|	-	0.0031	17.0	0.0	0.0043	16.6	0.0	1.3	1	0	0	1	1	1	1	Phosphoribosyl-dephospho-CoA	transferase	MdcG
DUF217	PF02697.9	gi|297526897|ref|YP_003668921.1|	-	0.019	15.1	0.8	0.031	14.4	0.6	1.6	1	1	0	1	1	1	0	Uncharacterized	ACR,	COG1753
DUF2612	PF11041.3	gi|297526897|ref|YP_003668921.1|	-	0.036	13.6	0.0	0.037	13.5	0.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2612)
DUF2191	PF09957.4	gi|297526897|ref|YP_003668921.1|	-	0.055	13.2	0.3	0.08	12.7	0.2	1.4	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2191)
Lactamase_B	PF00753.22	gi|297526898|ref|YP_003668922.1|	-	1.4e-16	60.7	0.2	1.8e-16	60.3	0.2	1.2	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|297526898|ref|YP_003668922.1|	-	3.2e-10	39.8	0.0	5e-10	39.2	0.0	1.4	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|297526898|ref|YP_003668922.1|	-	0.00025	20.8	0.0	0.00043	20.0	0.0	1.4	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
MlrC_C	PF07171.7	gi|297526898|ref|YP_003668922.1|	-	0.061	12.8	0.0	0.13	11.8	0.0	1.5	1	0	0	1	1	1	0	MlrC	C-terminus
dTMP_synthase	PF02593.9	gi|297526898|ref|YP_003668922.1|	-	0.13	11.6	0.0	14	4.9	0.0	2.6	3	0	0	3	3	3	0	Thymidylate	synthase
CcdA	PF07362.7	gi|297526899|ref|YP_003668923.1|	-	9.7e-05	22.1	0.4	0.00023	20.9	0.0	1.7	1	1	1	2	2	2	1	Post-segregation	antitoxin	CcdA
Kri1	PF05178.7	gi|297526899|ref|YP_003668923.1|	-	0.13	12.5	1.1	0.17	12.1	0.7	1.3	1	1	0	1	1	1	0	KRI1-like	family
RRF_GI	PF12614.3	gi|297526899|ref|YP_003668923.1|	-	0.62	9.8	3.1	2.4	8.0	0.2	2.0	1	1	1	2	2	2	0	Ribosome	recycling	factor
DUF4175	PF13779.1	gi|297526900|ref|YP_003668924.1|	-	0.028	12.1	0.1	0.038	11.7	0.1	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4175)
Dicty_REP	PF05086.7	gi|297526900|ref|YP_003668924.1|	-	1.1	6.9	4.2	1.8	6.2	2.9	1.3	1	0	0	1	1	1	0	Dictyostelium	(Slime	Mold)	REP	protein
HEPN	PF05168.9	gi|297526901|ref|YP_003668925.1|	-	9.4e-25	86.8	2.0	1.1e-24	86.5	1.4	1.0	1	0	0	1	1	1	1	HEPN	domain
YugN	PF08868.5	gi|297526901|ref|YP_003668925.1|	-	0.016	14.8	0.1	0.023	14.3	0.1	1.2	1	0	0	1	1	1	0	YugN-like	family
NTP_transf_2	PF01909.18	gi|297526902|ref|YP_003668926.1|	-	7.6e-16	58.2	1.1	1.1e-15	57.6	0.7	1.2	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
DNA_pol_B_palm	PF14792.1	gi|297526902|ref|YP_003668926.1|	-	0.0048	16.9	0.0	0.0065	16.5	0.0	1.2	1	0	0	1	1	1	1	DNA	polymerase	beta	palm
DUF2179	PF10035.4	gi|297526902|ref|YP_003668926.1|	-	0.093	12.3	0.0	0.21	11.2	0.0	1.6	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2179)
Amidohydro_1	PF01979.15	gi|297526903|ref|YP_003668927.1|	-	5.3e-20	72.3	1.9	1.1e-19	71.3	1.3	1.5	1	1	0	1	1	1	1	Amidohydrolase	family
Amidohydro_4	PF13147.1	gi|297526903|ref|YP_003668927.1|	-	1.4e-18	67.8	0.9	8.4e-18	65.3	0.7	2.0	1	1	0	1	1	1	1	Amidohydrolase
Amidohydro_5	PF13594.1	gi|297526903|ref|YP_003668927.1|	-	1.4e-09	37.6	0.0	3.9e-09	36.1	0.0	1.8	1	0	0	1	1	1	1	Amidohydrolase
Amidohydro_3	PF07969.6	gi|297526903|ref|YP_003668927.1|	-	1.6e-07	30.9	1.7	0.0055	15.9	0.1	2.8	3	0	0	3	3	3	2	Amidohydrolase	family
SIS	PF01380.17	gi|297526904|ref|YP_003668928.1|	-	2.5e-40	137.1	1.0	5.5e-26	90.7	0.5	2.5	2	1	0	2	2	2	2	SIS	domain
GATase_6	PF13522.1	gi|297526904|ref|YP_003668928.1|	-	2.2e-19	69.7	0.0	9.5e-19	67.6	0.0	2.0	2	0	0	2	2	2	1	Glutamine	amidotransferase	domain
GATase_7	PF13537.1	gi|297526904|ref|YP_003668928.1|	-	2.5e-15	56.2	0.0	4.9e-15	55.3	0.0	1.4	1	0	0	1	1	1	1	Glutamine	amidotransferase	domain
GATase_2	PF00310.16	gi|297526904|ref|YP_003668928.1|	-	1.1e-11	44.1	0.3	1.2e-08	34.1	0.0	3.7	2	1	1	3	3	3	2	Glutamine	amidotransferases	class-II
SIS_2	PF13580.1	gi|297526904|ref|YP_003668928.1|	-	5.3e-06	26.1	3.5	0.0014	18.3	0.5	2.9	2	1	1	3	3	3	2	SIS	domain
GATase_4	PF13230.1	gi|297526904|ref|YP_003668928.1|	-	3e-05	22.8	0.0	4.2e-05	22.3	0.0	1.2	1	0	0	1	1	1	1	Glutamine	amidotransferases	class-II
DegS	PF05384.6	gi|297526904|ref|YP_003668928.1|	-	0.023	13.8	2.7	0.18	10.9	0.8	2.2	2	0	0	2	2	2	0	Sensor	protein	DegS
ParA	PF10609.4	gi|297526904|ref|YP_003668928.1|	-	0.077	12.8	1.2	0.44	10.4	0.1	2.6	2	0	0	2	2	2	0	ParA/MinD	ATPase	like
DUF377	PF04041.8	gi|297526905|ref|YP_003668929.1|	-	1.8e-71	240.4	1.4	2.1e-71	240.2	1.0	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF377)
Kinesin-relat_1	PF12711.2	gi|297526906|ref|YP_003668930.1|	-	0.097	13.0	0.6	0.12	12.7	0.4	1.3	1	1	0	1	1	1	0	Kinesin	motor
RHH_1	PF01402.16	gi|297526906|ref|YP_003668930.1|	-	0.13	12.2	3.7	0.82	9.6	0.2	2.8	2	1	1	3	3	3	0	Ribbon-helix-helix	protein,	copG	family
DUF3802	PF12290.3	gi|297526906|ref|YP_003668930.1|	-	0.13	12.5	0.1	0.13	12.5	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3802)
Methyltransf_23	PF13489.1	gi|297526907|ref|YP_003668931.1|	-	8.7e-10	38.5	0.0	1.1e-09	38.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_11	PF08241.7	gi|297526907|ref|YP_003668931.1|	-	2.6e-09	37.4	0.0	6e-09	36.2	0.0	1.6	2	0	0	2	2	2	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|297526907|ref|YP_003668931.1|	-	9.2e-09	35.6	0.0	1.9e-08	34.7	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|297526907|ref|YP_003668931.1|	-	0.00027	20.5	0.7	0.00064	19.3	0.5	1.7	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|297526907|ref|YP_003668931.1|	-	0.00098	19.4	0.0	0.0028	17.9	0.0	1.8	2	0	0	2	2	2	1	Methyltransferase	domain
Acetyltransf_10	PF13673.1	gi|297526907|ref|YP_003668931.1|	-	0.0012	18.9	0.0	1.7	8.8	0.0	2.2	1	1	0	2	2	2	2	Acetyltransferase	(GNAT)	domain
Methyltransf_18	PF12847.2	gi|297526907|ref|YP_003668931.1|	-	0.0032	18.0	0.2	0.023	15.2	0.0	2.3	2	1	0	2	2	2	1	Methyltransferase	domain
Methyltransf_2	PF00891.13	gi|297526907|ref|YP_003668931.1|	-	0.052	12.7	0.0	0.1	11.8	0.0	1.5	1	1	0	1	1	1	0	O-methyltransferase
NodS	PF05401.6	gi|297526907|ref|YP_003668931.1|	-	0.099	12.0	0.1	0.16	11.3	0.0	1.5	1	1	0	1	1	1	0	Nodulation	protein	S	(NodS)
UPF0180	PF03698.8	gi|297526907|ref|YP_003668931.1|	-	0.15	11.8	0.2	1.7	8.5	0.0	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0180)
Asparaginase_2	PF01112.13	gi|297526908|ref|YP_003668932.1|	-	1.5e-71	240.7	0.1	1.9e-71	240.4	0.0	1.0	1	0	0	1	1	1	1	Asparaginase
DUF95	PF01944.12	gi|297526909|ref|YP_003668933.1|	-	3.9e-12	46.1	16.1	3.9e-12	46.1	11.1	3.7	3	1	1	4	4	4	1	Integral	membrane	protein	DUF95
DUF575	PF04746.7	gi|297526909|ref|YP_003668933.1|	-	0.1	12.6	1.0	0.31	11.1	0.3	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF575)
GHL6	PF14871.1	gi|297526910|ref|YP_003668934.1|	-	5.8e-45	152.5	0.1	1.3e-44	151.3	0.0	1.7	1	0	0	1	1	1	1	Hypothetical	glycosyl	hydrolase	6
Glyco_hydro_42M	PF08532.5	gi|297526910|ref|YP_003668934.1|	-	5.6e-13	48.5	0.2	1.3e-10	40.8	0.1	2.4	2	0	0	2	2	2	2	Beta-galactosidase	trimerisation	domain
ROK	PF00480.15	gi|297526911|ref|YP_003668935.1|	-	2.4e-35	121.9	0.4	3.7e-35	121.3	0.3	1.3	1	0	0	1	1	1	1	ROK	family
FtsA	PF14450.1	gi|297526911|ref|YP_003668935.1|	-	0.02	14.6	0.0	0.4	10.5	0.0	2.3	1	1	0	1	1	1	0	Cell	division	protein	FtsA
Plasmid_parti	PF01672.11	gi|297526911|ref|YP_003668935.1|	-	0.022	15.1	0.4	0.093	13.1	0.0	2.1	2	0	0	2	2	2	0	Putative	plasmid	partition	protein
Glucokinase	PF02685.11	gi|297526911|ref|YP_003668935.1|	-	0.12	11.0	0.0	0.18	10.5	0.0	1.3	1	0	0	1	1	1	0	Glucokinase
Abhydrolase_6	PF12697.2	gi|297526912|ref|YP_003668936.1|	-	1.2e-20	74.3	0.1	1.4e-10	41.4	0.1	2.0	1	1	1	2	2	2	2	Alpha/beta	hydrolase	family
Abhydrolase_5	PF12695.2	gi|297526912|ref|YP_003668936.1|	-	2e-17	63.3	0.0	2.4e-17	63.0	0.0	1.1	1	0	0	1	1	1	1	Alpha/beta	hydrolase	family
Abhydrolase_1	PF00561.15	gi|297526912|ref|YP_003668936.1|	-	1.9e-11	43.9	0.0	9.3e-07	28.6	0.0	2.1	1	1	1	2	2	2	2	alpha/beta	hydrolase	fold
Ser_hydrolase	PF06821.8	gi|297526912|ref|YP_003668936.1|	-	0.00022	20.8	0.0	0.00043	19.9	0.0	1.4	1	1	0	1	1	1	1	Serine	hydrolase
DLH	PF01738.13	gi|297526912|ref|YP_003668936.1|	-	0.00047	19.5	0.0	0.0006	19.1	0.0	1.1	1	0	0	1	1	1	1	Dienelactone	hydrolase	family
Abhydrolase_2	PF02230.11	gi|297526912|ref|YP_003668936.1|	-	0.00075	18.9	0.0	0.0074	15.7	0.0	1.9	2	0	0	2	2	2	1	Phospholipase/Carboxylesterase
FSH1	PF03959.8	gi|297526912|ref|YP_003668936.1|	-	0.0028	17.1	0.0	0.0089	15.4	0.0	1.7	2	0	0	2	2	2	1	Serine	hydrolase	(FSH1)
UPF0227	PF05728.7	gi|297526912|ref|YP_003668936.1|	-	0.039	13.6	0.1	0.058	13.1	0.1	1.4	1	1	0	1	1	1	0	Uncharacterised	protein	family	(UPF0227)
Esterase	PF00756.15	gi|297526912|ref|YP_003668936.1|	-	0.047	13.0	0.0	0.31	10.4	0.0	2.0	2	0	0	2	2	2	0	Putative	esterase
Abhydrolase_4	PF08386.5	gi|297526912|ref|YP_003668936.1|	-	0.063	13.1	0.0	0.091	12.6	0.0	1.2	1	0	0	1	1	1	0	TAP-like	protein
HTH_3	PF01381.17	gi|297526913|ref|YP_003668937.1|	-	2.9e-05	23.8	0.1	5.8e-05	22.8	0.1	1.6	1	0	0	1	1	1	1	Helix-turn-helix
HTH_37	PF13744.1	gi|297526913|ref|YP_003668937.1|	-	0.00099	18.8	0.1	0.0017	18.1	0.0	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|297526913|ref|YP_003668937.1|	-	0.0017	17.9	0.1	0.0041	16.7	0.0	1.7	2	0	0	2	2	2	1	Homeodomain-like	domain
DUF134	PF02001.11	gi|297526913|ref|YP_003668937.1|	-	0.0034	17.2	0.1	0.02	14.8	0.0	1.9	1	1	1	2	2	2	1	Protein	of	unknown	function	DUF134
HTH_19	PF12844.2	gi|297526913|ref|YP_003668937.1|	-	0.0062	16.5	0.1	0.022	14.8	0.0	2.2	1	1	0	1	1	1	1	Helix-turn-helix	domain
Cro	PF09048.5	gi|297526913|ref|YP_003668937.1|	-	0.083	12.5	0.0	0.18	11.4	0.0	1.6	1	0	0	1	1	1	0	Cro
HTH_1	PF00126.22	gi|297526913|ref|YP_003668937.1|	-	0.13	12.0	0.0	0.33	10.7	0.0	1.7	1	0	0	1	1	1	0	Bacterial	regulatory	helix-turn-helix	protein,	lysR	family
tRNA-synt_1g	PF09334.6	gi|297526914|ref|YP_003668938.1|	-	1.2e-110	369.9	6.9	2.2e-109	365.7	4.8	2.0	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(M)
tRNA-synt_1	PF00133.17	gi|297526914|ref|YP_003668938.1|	-	2.1e-23	82.1	5.2	4e-13	48.2	1.2	4.0	1	1	2	3	3	3	3	tRNA	synthetases	class	I	(I,	L,	M	and	V)
tRNA-synt_1e	PF01406.14	gi|297526914|ref|YP_003668938.1|	-	1.5e-09	37.3	4.3	1.7e-06	27.4	0.1	2.5	3	0	0	3	3	3	2	tRNA	synthetases	class	I	(C)	catalytic	domain
Anticodon_1	PF08264.8	gi|297526914|ref|YP_003668938.1|	-	2.7e-07	30.4	1.1	1.3e-06	28.1	0.0	2.4	3	0	0	3	3	3	1	Anticodon-binding	domain	of	tRNA
tRNA-synt_1f	PF01921.13	gi|297526914|ref|YP_003668938.1|	-	7e-05	21.6	1.5	0.0012	17.5	0.0	3.0	2	2	1	3	3	3	1	tRNA	synthetases	class	I	(K)
tRNA-synt_1d	PF00750.14	gi|297526914|ref|YP_003668938.1|	-	0.0099	14.7	1.6	11	4.6	0.0	3.2	2	1	1	3	3	3	2	tRNA	synthetases	class	I	(R)
LIM	PF00412.17	gi|297526914|ref|YP_003668938.1|	-	0.039	14.0	0.1	0.093	12.8	0.1	1.6	1	0	0	1	1	1	0	LIM	domain
RPA_C	PF08784.6	gi|297526914|ref|YP_003668938.1|	-	0.25	11.7	0.7	2.9	8.3	0.0	2.8	3	0	0	3	3	3	0	Replication	protein	A	C	terminal
DUF4413	PF14372.1	gi|297526914|ref|YP_003668938.1|	-	1	9.3	5.9	20	5.2	0.1	3.6	3	1	0	3	3	3	0	Domain	of	unknown	function	(DUF4413)
Radical_SAM	PF04055.16	gi|297526915|ref|YP_003668939.1|	-	6.6e-16	58.9	0.1	1.9e-15	57.4	0.0	1.9	2	0	0	2	2	2	1	Radical	SAM	superfamily
Birna_VP3	PF01767.11	gi|297526915|ref|YP_003668939.1|	-	0.15	11.6	0.0	0.3	10.6	0.0	1.4	1	0	0	1	1	1	0	Birnavirus	VP3	protein
GHMP_kinases_C	PF08544.8	gi|297526916|ref|YP_003668940.1|	-	0.0048	17.0	0.0	0.0072	16.5	0.0	1.4	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
MCM_N	PF14551.1	gi|297526916|ref|YP_003668940.1|	-	0.024	15.1	0.6	0.034	14.6	0.4	1.3	1	0	0	1	1	1	0	MCM	N-terminal	domain
TetR_C_5	PF08360.6	gi|297526916|ref|YP_003668940.1|	-	0.042	13.8	0.2	0.048	13.6	0.2	1.4	1	0	0	1	1	1	0	QacR-like	protein,	C-terminal	region
Radical_SAM	PF04055.16	gi|297526916|ref|YP_003668940.1|	-	0.044	13.9	0.8	0.075	13.2	0.6	1.5	1	1	0	1	1	1	0	Radical	SAM	superfamily
Rad10	PF03834.9	gi|297526916|ref|YP_003668940.1|	-	0.046	13.4	0.4	0.081	12.6	0.3	1.4	1	0	0	1	1	1	0	Binding	domain	of	DNA	repair	protein	Ercc1	(rad10/Swi10)
PH_3	PF14593.1	gi|297526916|ref|YP_003668940.1|	-	0.062	13.1	0.0	0.084	12.7	0.0	1.3	1	0	0	1	1	1	0	PH	domain
HTH_20	PF12840.2	gi|297526917|ref|YP_003668941.1|	-	0.003	17.3	0.3	0.013	15.2	0.0	2.3	3	0	0	3	3	3	1	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|297526917|ref|YP_003668941.1|	-	0.0031	17.6	0.2	0.034	14.2	0.1	2.2	2	0	0	2	2	2	1	Transcriptional	regulator
Sulfolobus_pRN	PF05584.6	gi|297526917|ref|YP_003668941.1|	-	0.0038	17.1	0.3	0.0091	15.9	0.0	1.7	2	0	0	2	2	2	1	Sulfolobus	plasmid	regulatory	protein
TrmB	PF01978.14	gi|297526917|ref|YP_003668941.1|	-	0.0051	16.4	0.0	0.0093	15.6	0.0	1.3	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|297526917|ref|YP_003668941.1|	-	0.0098	15.5	0.0	0.024	14.2	0.0	1.7	1	0	0	1	1	1	1	MarR	family
HTH_IclR	PF09339.5	gi|297526917|ref|YP_003668941.1|	-	0.015	14.9	0.0	0.039	13.5	0.0	1.7	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
HTH_34	PF13601.1	gi|297526917|ref|YP_003668941.1|	-	0.018	15.0	0.3	0.036	14.1	0.1	1.6	2	0	0	2	2	2	0	Winged	helix	DNA-binding	domain
MarR	PF01047.17	gi|297526917|ref|YP_003668941.1|	-	0.033	13.8	0.0	0.073	12.7	0.0	1.5	1	0	0	1	1	1	0	MarR	family
TBPIP	PF07106.8	gi|297526917|ref|YP_003668941.1|	-	0.036	13.6	0.0	0.044	13.3	0.0	1.1	1	0	0	1	1	1	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
HTH_5	PF01022.15	gi|297526917|ref|YP_003668941.1|	-	0.043	13.4	0.4	0.043	13.4	0.2	2.4	4	0	0	4	4	4	0	Bacterial	regulatory	protein,	arsR	family
4HBT	PF03061.17	gi|297526918|ref|YP_003668942.1|	-	0.00053	20.0	0.0	0.00068	19.7	0.0	1.2	1	0	0	1	1	1	1	Thioesterase	superfamily
Peptidase_M55	PF04951.8	gi|297526920|ref|YP_003668944.1|	-	2.3e-89	299.1	0.0	2.6e-89	298.9	0.0	1.0	1	0	0	1	1	1	1	D-aminopeptidase
OAD_beta	PF03977.8	gi|297526921|ref|YP_003668945.1|	-	7.1e-172	571.0	26.2	8.2e-172	570.8	18.1	1.0	1	0	0	1	1	1	1	Na+-transporting	oxaloacetate	decarboxylase	beta	subunit
DUF1029	PF06269.7	gi|297526921|ref|YP_003668945.1|	-	0.046	13.7	0.8	0.26	11.3	0.1	2.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1029)
OAD_gamma	PF04277.8	gi|297526922|ref|YP_003668946.1|	-	2.5e-14	53.4	0.2	3.3e-14	53.0	0.1	1.2	1	0	0	1	1	1	1	Oxaloacetate	decarboxylase,	gamma	chain
Lysine_decarbox	PF03641.9	gi|297526923|ref|YP_003668947.1|	-	0.016	15.0	0.0	0.03	14.1	0.0	1.5	1	1	0	1	1	1	0	Possible	lysine	decarboxylase
DUF2529	PF10740.4	gi|297526923|ref|YP_003668947.1|	-	0.12	11.8	0.0	0.25	10.7	0.0	1.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2529)
TFX_C	PF14601.1	gi|297526925|ref|YP_003668949.1|	-	1.1e-10	41.1	0.1	1.6e-10	40.5	0.1	1.3	1	0	0	1	1	1	1	DNA_binding	protein,	TFX,	C-term
Sigma70_r4_2	PF08281.7	gi|297526925|ref|YP_003668949.1|	-	0.00014	21.1	1.3	0.00019	20.8	0.1	1.8	2	0	0	2	2	2	1	Sigma-70,	region	4
HTH_23	PF13384.1	gi|297526925|ref|YP_003668949.1|	-	0.003	17.1	0.2	0.0081	15.7	0.1	1.8	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_28	PF13518.1	gi|297526925|ref|YP_003668949.1|	-	0.02	14.8	1.6	0.025	14.5	0.4	1.8	2	0	0	2	2	2	0	Helix-turn-helix	domain
Sigma70_r4	PF04545.11	gi|297526925|ref|YP_003668949.1|	-	0.049	12.9	0.3	0.13	11.6	0.2	1.7	1	0	0	1	1	1	0	Sigma-70,	region	4
HTH_38	PF13936.1	gi|297526925|ref|YP_003668949.1|	-	0.049	13.1	1.2	0.15	11.6	0.0	2.3	3	0	0	3	3	3	0	Helix-turn-helix	domain
Myb_DNA-bind_6	PF13921.1	gi|297526925|ref|YP_003668949.1|	-	0.078	13.0	0.2	0.31	11.1	0.1	2.0	2	0	0	2	2	2	0	Myb-like	DNA-binding	domain
Ub-RnfH	PF03658.9	gi|297526928|ref|YP_003668952.1|	-	0.029	14.2	0.5	0.046	13.6	0.3	1.4	1	1	0	1	1	1	0	RnfH	family	Ubiquitin
Ribosomal_L25p	PF01386.14	gi|297526928|ref|YP_003668952.1|	-	0.034	14.2	1.3	0.7	10.0	0.1	2.0	1	1	1	2	2	2	0	Ribosomal	L25p	family
BatD	PF13584.1	gi|297526929|ref|YP_003668953.1|	-	0.0052	15.4	0.5	0.0077	14.8	0.4	1.2	1	0	0	1	1	1	1	Oxygen	tolerance
Acyl_transf_3	PF01757.17	gi|297526929|ref|YP_003668953.1|	-	6.7	5.4	7.3	21	3.8	5.1	1.8	1	1	0	1	1	1	0	Acyltransferase	family
DEAD	PF00270.24	gi|297526930|ref|YP_003668954.1|	-	2.8e-28	98.4	0.0	4.4e-28	97.8	0.0	1.3	1	0	0	1	1	1	1	DEAD/DEAH	box	helicase
DUF1998	PF09369.5	gi|297526930|ref|YP_003668954.1|	-	4e-15	56.1	0.5	8.5e-15	55.1	0.3	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1998)
Helicase_C	PF00271.26	gi|297526930|ref|YP_003668954.1|	-	9.2e-15	54.2	0.0	1.7e-13	50.2	0.0	2.4	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
AAA_19	PF13245.1	gi|297526930|ref|YP_003668954.1|	-	0.00051	19.7	0.0	0.0015	18.2	0.0	1.8	1	0	0	1	1	1	1	Part	of	AAA	domain
ResIII	PF04851.10	gi|297526930|ref|YP_003668954.1|	-	0.0011	18.7	0.0	0.0053	16.5	0.0	1.9	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
UvrD-helicase	PF00580.16	gi|297526930|ref|YP_003668954.1|	-	0.0023	17.2	0.0	0.004	16.5	0.0	1.3	1	0	0	1	1	1	1	UvrD/REP	helicase	N-terminal	domain
SNF2_N	PF00176.18	gi|297526930|ref|YP_003668954.1|	-	0.016	13.9	0.0	0.099	11.4	0.0	1.9	2	0	0	2	2	2	0	SNF2	family	N-terminal	domain
PmbA_TldD	PF01523.11	gi|297526932|ref|YP_003668956.1|	-	3.3e-73	246.5	3.4	4.2e-73	246.1	2.3	1.1	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
RE_HindVP	PF09519.5	gi|297526932|ref|YP_003668956.1|	-	0.18	10.6	0.0	0.27	10.1	0.0	1.2	1	0	0	1	1	1	0	HindVP	restriction	endonuclease
PmbA_TldD	PF01523.11	gi|297526933|ref|YP_003668957.1|	-	1.4e-59	201.8	0.7	2.2e-59	201.1	0.5	1.3	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
BPL_LplA_LipB	PF03099.14	gi|297526934|ref|YP_003668958.1|	-	8.8e-14	51.5	0.1	1.4e-13	50.9	0.1	1.3	1	0	0	1	1	1	1	Biotin/lipoate	A/B	protein	ligase	family
BPL_C	PF02237.12	gi|297526934|ref|YP_003668958.1|	-	0.00084	18.9	0.2	0.0014	18.2	0.1	1.4	1	0	0	1	1	1	1	Biotin	protein	ligase	C	terminal	domain
Rrf2	PF02082.15	gi|297526934|ref|YP_003668958.1|	-	0.022	14.8	0.1	0.16	12.0	0.0	2.2	2	0	0	2	2	2	0	Transcriptional	regulator
CxxCxxCC	PF03692.10	gi|297526935|ref|YP_003668959.1|	-	1.3e-07	31.9	0.4	3.7e-07	30.5	0.3	1.7	1	1	0	1	1	1	1	Putative	zinc-	or	iron-chelating	domain
CTP_transf_2	PF01467.21	gi|297526936|ref|YP_003668960.1|	-	3.5e-11	43.3	0.1	5.1e-11	42.8	0.1	1.4	1	1	0	1	1	1	1	Cytidylyltransferase
ATP-sulfurylase	PF01747.12	gi|297526936|ref|YP_003668960.1|	-	0.039	13.2	0.1	6.3	6.0	0.0	2.1	2	0	0	2	2	2	0	ATP-sulfurylase
HIGH_NTase1	PF05636.6	gi|297526936|ref|YP_003668960.1|	-	0.052	12.5	0.2	1.8	7.5	0.1	2.1	2	0	0	2	2	2	0	HIGH	Nucleotidyl	Transferase
Peptidase_M50	PF02163.17	gi|297526937|ref|YP_003668961.1|	-	1.8e-17	62.9	8.8	2e-17	62.7	5.1	1.9	1	1	0	1	1	1	1	Peptidase	family	M50
Herpes_glycop	PF01528.11	gi|297526937|ref|YP_003668961.1|	-	0.54	8.8	9.3	0.29	9.7	1.6	2.2	2	0	0	2	2	2	0	Herpesvirus	glycoprotein	M
DUF4418	PF14387.1	gi|297526937|ref|YP_003668961.1|	-	0.57	9.9	7.5	0.87	9.3	0.9	2.4	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4418)
Cytochrom_B_N	PF00033.14	gi|297526939|ref|YP_003668963.1|	-	0.065	12.5	2.4	0.11	11.7	0.3	2.0	2	0	0	2	2	2	0	Cytochrome	b(N-terminal)/b6/petB
SLAC1	PF03595.12	gi|297526939|ref|YP_003668963.1|	-	0.12	10.9	8.2	0.66	8.5	1.9	2.1	1	1	1	2	2	2	0	Voltage-dependent	anion	channel
Srg	PF02118.16	gi|297526939|ref|YP_003668963.1|	-	0.29	10.5	8.6	1.4	8.2	0.3	2.7	2	1	1	3	3	3	0	Srg	family	chemoreceptor
MpPF26	PF07666.6	gi|297526939|ref|YP_003668963.1|	-	1.1	9.1	11.1	1.6	8.6	3.7	2.4	2	0	0	2	2	2	0	M	penetrans	paralogue	family	26
DUF4064	PF13273.1	gi|297526939|ref|YP_003668963.1|	-	3.6	7.7	16.8	1.3	9.1	3.0	2.9	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF4064)
SHOCT	PF09851.4	gi|297526940|ref|YP_003668964.1|	-	0.023	14.1	0.2	0.083	12.3	0.1	2.1	1	0	0	1	1	1	0	Short	C-terminal	domain
RNA_pol_Rpb1_3	PF04983.13	gi|297526940|ref|YP_003668964.1|	-	0.035	13.8	0.0	0.063	12.9	0.0	1.3	1	1	0	1	1	1	0	RNA	polymerase	Rpb1,	domain	3
NTP_transf_2	PF01909.18	gi|297526943|ref|YP_003668967.1|	-	4.2e-05	23.8	0.0	4.5e-05	23.6	0.0	1.1	1	0	0	1	1	1	1	Nucleotidyltransferase	domain
HD	PF01966.17	gi|297526944|ref|YP_003668968.1|	-	4.9e-10	39.4	0.3	1.8e-09	37.6	0.2	2.0	1	0	0	1	1	1	1	HD	domain
DEK_C	PF08766.6	gi|297526944|ref|YP_003668968.1|	-	0.025	14.3	0.4	0.093	12.5	0.1	2.1	2	0	0	2	2	2	0	DEK	C	terminal	domain
3HCDH	PF00725.17	gi|297526944|ref|YP_003668968.1|	-	0.055	13.8	0.0	6.4	7.2	0.0	2.9	2	0	0	2	2	2	0	3-hydroxyacyl-CoA	dehydrogenase,	C-terminal	domain
HTH_24	PF13412.1	gi|297526946|ref|YP_003668970.1|	-	1.3e-07	30.8	0.4	1.7e-07	30.5	0.2	1.2	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|297526946|ref|YP_003668970.1|	-	2.6e-06	26.9	0.2	3.2e-06	26.6	0.1	1.1	1	0	0	1	1	1	1	HTH	domain
HTH_IclR	PF09339.5	gi|297526946|ref|YP_003668970.1|	-	6.7e-06	25.6	0.0	8.4e-06	25.2	0.0	1.1	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
TrmB	PF01978.14	gi|297526946|ref|YP_003668970.1|	-	2.2e-05	24.0	0.2	2.9e-05	23.6	0.1	1.3	1	1	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_12	PF08461.5	gi|297526946|ref|YP_003668970.1|	-	2.7e-05	23.8	0.1	4.1e-05	23.2	0.1	1.3	1	0	0	1	1	1	1	Ribonuclease	R	winged-helix	domain
HARE-HTH	PF05066.8	gi|297526946|ref|YP_003668970.1|	-	8e-05	22.9	0.2	0.00018	21.8	0.1	1.5	1	1	0	2	2	2	1	HB1,	ASXL,	restriction	endonuclease	HTH	domain
HTH_20	PF12840.2	gi|297526946|ref|YP_003668970.1|	-	0.00013	21.7	0.0	0.00014	21.5	0.0	1.1	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_45	PF14947.1	gi|297526946|ref|YP_003668970.1|	-	0.00033	20.4	0.1	0.00038	20.2	0.1	1.1	1	0	0	1	1	1	1	Winged	helix-turn-helix
MarR_2	PF12802.2	gi|297526946|ref|YP_003668970.1|	-	0.00062	19.3	0.0	0.00078	19.0	0.0	1.1	1	0	0	1	1	1	1	MarR	family
Rrf2	PF02082.15	gi|297526946|ref|YP_003668970.1|	-	0.00068	19.7	0.0	0.00077	19.5	0.0	1.1	1	0	0	1	1	1	1	Transcriptional	regulator
Rio2_N	PF09202.6	gi|297526946|ref|YP_003668970.1|	-	0.0013	18.7	0.0	0.0015	18.5	0.0	1.1	1	0	0	1	1	1	1	Rio2,	N-terminal
HTH_5	PF01022.15	gi|297526946|ref|YP_003668970.1|	-	0.002	17.7	0.0	0.0022	17.6	0.0	1.1	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
DUF2250	PF10007.4	gi|297526946|ref|YP_003668970.1|	-	0.0021	17.9	0.2	0.0022	17.8	0.1	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
HTH_27	PF13463.1	gi|297526946|ref|YP_003668970.1|	-	0.0021	18.3	0.1	0.0028	17.9	0.0	1.2	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
DUF2089	PF09862.4	gi|297526946|ref|YP_003668970.1|	-	0.0029	17.4	0.2	0.0057	16.4	0.1	1.5	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF2089)
HrcA_DNA-bdg	PF03444.10	gi|297526946|ref|YP_003668970.1|	-	0.0031	16.9	0.2	0.0035	16.7	0.1	1.1	1	0	0	1	1	1	1	Winged	helix-turn-helix	transcription	repressor,	HrcA	DNA-binding
EAP30	PF04157.11	gi|297526946|ref|YP_003668970.1|	-	0.0097	15.0	0.0	0.01	15.0	0.0	1.0	1	0	0	1	1	1	1	EAP30/Vps36	family
TFIIE_alpha	PF02002.12	gi|297526946|ref|YP_003668970.1|	-	0.011	15.2	0.1	0.012	15.0	0.1	1.2	1	0	0	1	1	1	0	TFIIE	alpha	subunit
DUF3489	PF11994.3	gi|297526946|ref|YP_003668970.1|	-	0.013	15.4	0.1	0.014	15.2	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3489)
DUF977	PF06163.6	gi|297526946|ref|YP_003668970.1|	-	0.019	14.6	0.1	0.019	14.6	0.0	1.0	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF977)
HTH_23	PF13384.1	gi|297526946|ref|YP_003668970.1|	-	0.021	14.4	0.0	0.028	14.0	0.0	1.4	1	1	0	1	1	1	0	Homeodomain-like	domain
HTH_28	PF13518.1	gi|297526946|ref|YP_003668970.1|	-	0.026	14.5	0.1	0.033	14.1	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_DeoR	PF08220.7	gi|297526946|ref|YP_003668970.1|	-	0.044	13.3	0.0	0.056	12.9	0.0	1.2	1	0	0	1	1	1	0	DeoR-like	helix-turn-helix	domain
LexA_DNA_bind	PF01726.11	gi|297526946|ref|YP_003668970.1|	-	0.047	13.2	0.1	0.056	13.0	0.1	1.1	1	0	0	1	1	1	0	LexA	DNA	binding	domain
FaeA	PF04703.7	gi|297526946|ref|YP_003668970.1|	-	0.05	13.7	0.0	0.06	13.5	0.0	1.1	1	0	0	1	1	1	0	FaeA-like	protein
DUF4364	PF14277.1	gi|297526946|ref|YP_003668970.1|	-	0.052	13.1	0.0	0.06	12.9	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4364)
HTH_Mga	PF08280.6	gi|297526946|ref|YP_003668970.1|	-	0.054	13.2	0.0	0.059	13.1	0.0	1.2	1	0	0	1	1	1	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
z-alpha	PF02295.12	gi|297526946|ref|YP_003668970.1|	-	0.061	13.0	0.1	0.076	12.8	0.1	1.2	1	0	0	1	1	1	0	Adenosine	deaminase	z-alpha	domain
MarR	PF01047.17	gi|297526946|ref|YP_003668970.1|	-	0.069	12.8	0.0	0.093	12.4	0.0	1.3	1	0	0	1	1	1	0	MarR	family
GntR	PF00392.16	gi|297526946|ref|YP_003668970.1|	-	0.093	12.1	0.0	0.11	11.9	0.0	1.2	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
Mrr_N	PF14338.1	gi|297526946|ref|YP_003668970.1|	-	0.12	12.4	0.3	0.43	10.6	0.2	1.7	1	1	0	1	1	1	0	Mrr	N-terminal	domain
Glyco_hydro_2	PF00703.16	gi|297526948|ref|YP_003668972.1|	-	0.012	16.0	0.0	0.021	15.2	0.0	1.3	1	0	0	1	1	1	0	Glycosyl	hydrolases	family	2
CARDB	PF07705.6	gi|297526948|ref|YP_003668972.1|	-	0.027	14.5	1.2	0.057	13.4	0.3	1.8	1	1	1	2	2	2	0	CARDB
NPCBM_assoc	PF10633.4	gi|297526948|ref|YP_003668972.1|	-	0.033	14.2	0.8	0.13	12.2	0.2	2.1	2	0	0	2	2	2	0	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
DUF2808	PF10989.3	gi|297526948|ref|YP_003668972.1|	-	0.051	13.1	0.0	0.33	10.5	0.0	2.1	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2808)
Inhibitor_I42	PF09394.5	gi|297526948|ref|YP_003668972.1|	-	0.06	13.6	0.3	6.3	7.2	0.0	2.3	2	0	0	2	2	2	0	Chagasin	family	peptidase	inhibitor	I42
DUF824	PF05688.6	gi|297526948|ref|YP_003668972.1|	-	0.11	12.1	0.3	0.32	10.6	0.1	1.9	2	0	0	2	2	2	0	Salmonella	repeat	of	unknown	function	(DUF824)
BACON	PF13004.2	gi|297526948|ref|YP_003668972.1|	-	0.39	10.9	2.7	0.38	10.9	0.6	1.9	1	1	0	2	2	2	0	Bacteroidetes-Associated	Carbohydrate-binding	Often	N-terminal
DUF1628	PF07790.6	gi|297526949|ref|YP_003668973.1|	-	0.0012	19.5	2.9	0.0015	19.2	2.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1628)
DUF3382	PF11862.3	gi|297526949|ref|YP_003668973.1|	-	0.0086	15.9	0.2	0.011	15.6	0.2	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF3382)
DAGK_prokar	PF01219.14	gi|297526949|ref|YP_003668973.1|	-	0.024	14.2	0.9	0.027	14.0	0.6	1.1	1	0	0	1	1	1	0	Prokaryotic	diacylglycerol	kinase
gp12-short_mid	PF09089.5	gi|297526949|ref|YP_003668973.1|	-	0.038	13.9	0.1	0.048	13.6	0.1	1.2	1	0	0	1	1	1	0	Phage	short	tail	fibre	protein	gp12,	middle	domain
DUF4352	PF11611.3	gi|297526949|ref|YP_003668973.1|	-	0.05	13.7	0.6	0.061	13.4	0.4	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4352)
TPPK_C	PF12555.3	gi|297526949|ref|YP_003668973.1|	-	0.56	9.9	9.7	0.71	9.6	5.7	2.0	2	1	0	2	2	2	0	Thiamine	pyrophosphokinase	C	terminal
Arch_flagellin	PF01917.11	gi|297526950|ref|YP_003668974.1|	-	0.00073	19.2	3.3	0.001	18.6	2.3	1.2	1	0	0	1	1	1	1	Archaebacterial	flagellin
Imm33	PF15580.1	gi|297526950|ref|YP_003668974.1|	-	0.045	13.2	0.0	0.076	12.4	0.0	1.3	1	0	0	1	1	1	0	Immunity	protein	33
BsuPI	PF12690.2	gi|297526950|ref|YP_003668974.1|	-	0.062	13.0	0.2	2.6	7.7	0.0	2.6	2	1	1	3	3	3	0	Intracellular	proteinase	inhibitor
MacB_PCD	PF12704.2	gi|297526950|ref|YP_003668974.1|	-	0.66	9.5	5.3	0.35	10.4	1.5	1.8	1	1	1	2	2	2	0	MacB-like	periplasmic	core	domain
TPPK_C	PF12555.3	gi|297526950|ref|YP_003668974.1|	-	1.6	8.5	7.3	3.3	7.5	5.1	1.5	1	0	0	1	1	1	0	Thiamine	pyrophosphokinase	C	terminal
PMT	PF02366.13	gi|297526951|ref|YP_003668975.1|	-	4.2e-07	29.5	16.7	4.2e-07	29.5	11.6	3.2	2	1	0	2	2	2	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
PMT_2	PF13231.1	gi|297526951|ref|YP_003668975.1|	-	1.6e-06	28.0	16.0	1.6e-06	28.0	11.1	2.9	3	1	0	3	3	3	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
BTP	PF05232.7	gi|297526951|ref|YP_003668975.1|	-	9.1	6.1	10.9	1.2	8.9	0.4	3.8	3	0	0	3	3	3	0	Bacterial	Transmembrane	Pair	family
DUF1628	PF07790.6	gi|297526952|ref|YP_003668976.1|	-	0.0011	19.6	7.7	0.0019	18.9	2.0	2.1	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1628)
CARDB	PF07705.6	gi|297526952|ref|YP_003668976.1|	-	0.048	13.7	2.3	0.56	10.2	1.6	2.1	1	1	0	1	1	1	0	CARDB
DUF11	PF01345.13	gi|297526952|ref|YP_003668976.1|	-	0.058	13.4	3.2	0.07	13.1	0.3	2.2	1	1	1	2	2	2	0	Domain	of	unknown	function	DUF11
DUF4352	PF11611.3	gi|297526952|ref|YP_003668976.1|	-	0.068	13.3	0.4	0.13	12.3	0.3	1.5	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4352)
MacB_PCD	PF12704.2	gi|297526952|ref|YP_003668976.1|	-	0.31	10.6	3.4	0.35	10.4	2.3	1.2	1	0	0	1	1	1	0	MacB-like	periplasmic	core	domain
TPPK_C	PF12555.3	gi|297526952|ref|YP_003668976.1|	-	0.46	10.2	6.3	1.2	8.9	4.3	1.7	1	0	0	1	1	1	0	Thiamine	pyrophosphokinase	C	terminal
Ribosomal_S6	PF01250.12	gi|297526954|ref|YP_003668978.1|	-	0.004	16.9	0.0	0.0068	16.2	0.0	1.4	1	0	0	1	1	1	1	Ribosomal	protein	S6
zf-DHHC	PF01529.15	gi|297526954|ref|YP_003668978.1|	-	9.9	5.5	6.6	14	5.0	4.6	1.2	1	0	0	1	1	1	0	DHHC	palmitoyltransferase
DUF3954	PF13128.1	gi|297526956|ref|YP_003668980.1|	-	0.0022	17.3	0.0	1.3	8.5	0.0	3.4	3	0	0	3	3	3	2	Protein	of	unknown	function	(DUF3954)
T2SF	PF00482.18	gi|297526958|ref|YP_003668982.1|	-	6.6e-13	48.6	8.7	3.2e-07	30.2	2.0	3.6	3	1	0	3	3	3	2	Type	II	secretion	system	(T2SS),	protein	F
T2SE	PF00437.15	gi|297526959|ref|YP_003668983.1|	-	5.5e-49	166.5	0.0	8.4e-49	165.8	0.0	1.2	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
ABC_tran	PF00005.22	gi|297526959|ref|YP_003668983.1|	-	0.00057	20.1	0.0	0.0015	18.7	0.0	1.7	1	0	0	1	1	1	1	ABC	transporter
AAA_18	PF13238.1	gi|297526959|ref|YP_003668983.1|	-	0.012	15.9	0.5	4.9	7.4	0.0	2.8	3	0	0	3	3	3	0	AAA	domain
DUF258	PF03193.11	gi|297526959|ref|YP_003668983.1|	-	0.017	14.3	0.1	0.034	13.3	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_29	PF13555.1	gi|297526959|ref|YP_003668983.1|	-	0.028	13.9	1.4	0.045	13.2	0.1	2.0	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
AAA_19	PF13245.1	gi|297526959|ref|YP_003668983.1|	-	0.14	11.9	0.1	0.45	10.3	0.0	1.8	1	0	0	1	1	1	0	Part	of	AAA	domain
V4R	PF02830.13	gi|297526960|ref|YP_003668984.1|	-	8.1e-08	31.9	0.1	1.5e-07	31.1	0.1	1.5	1	0	0	1	1	1	1	V4R	domain
ACT	PF01842.20	gi|297526960|ref|YP_003668984.1|	-	0.00038	19.8	0.0	0.00086	18.7	0.0	1.6	1	0	0	1	1	1	1	ACT	domain
ACT_4	PF13291.1	gi|297526960|ref|YP_003668984.1|	-	0.0037	17.5	0.0	0.0089	16.3	0.0	1.6	1	0	0	1	1	1	1	ACT	domain
DUF150	PF02576.12	gi|297526961|ref|YP_003668985.1|	-	0.011	15.2	0.1	0.031	13.8	0.0	1.8	1	1	1	2	2	2	0	Uncharacterised	BCR,	YhbC	family	COG0779
KaiC	PF06745.8	gi|297526964|ref|YP_003668988.1|	-	3.4e-30	104.8	0.0	4.1e-30	104.5	0.0	1.0	1	0	0	1	1	1	1	KaiC
AAA_22	PF13401.1	gi|297526964|ref|YP_003668988.1|	-	2.1e-07	31.1	0.0	4.2e-07	30.1	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
DnaB_C	PF03796.10	gi|297526964|ref|YP_003668988.1|	-	1.5e-05	23.9	0.6	0.0036	16.2	0.0	2.1	2	0	0	2	2	2	2	DnaB-like	helicase	C	terminal	domain
AAA_25	PF13481.1	gi|297526964|ref|YP_003668988.1|	-	5.1e-05	22.7	0.0	0.00012	21.5	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
Arch_ATPase	PF01637.13	gi|297526964|ref|YP_003668988.1|	-	0.00082	19.1	0.1	0.0011	18.6	0.0	1.1	1	0	0	1	1	1	1	Archaeal	ATPase
AAA_16	PF13191.1	gi|297526964|ref|YP_003668988.1|	-	0.0037	17.2	0.0	0.0071	16.3	0.0	1.4	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_18	PF13238.1	gi|297526964|ref|YP_003668988.1|	-	0.0053	17.0	1.5	0.018	15.3	1.0	1.9	1	1	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|297526964|ref|YP_003668988.1|	-	0.0068	16.6	0.0	0.01	16.0	0.0	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_14	PF13173.1	gi|297526964|ref|YP_003668988.1|	-	0.012	15.4	0.6	0.046	13.6	0.4	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_24	PF13479.1	gi|297526964|ref|YP_003668988.1|	-	0.015	14.9	0.2	0.094	12.2	0.1	1.9	2	0	0	2	2	2	0	AAA	domain
AAA_32	PF13654.1	gi|297526964|ref|YP_003668988.1|	-	0.017	13.8	0.3	0.03	12.9	0.0	1.5	2	0	0	2	2	2	0	AAA	domain
AAA_33	PF13671.1	gi|297526964|ref|YP_003668988.1|	-	0.03	14.1	0.0	0.04	13.7	0.0	1.4	1	1	0	1	1	1	0	AAA	domain
RecA	PF00154.16	gi|297526964|ref|YP_003668988.1|	-	0.031	13.3	0.0	0.6	9.1	0.0	2.1	2	0	0	2	2	2	0	recA	bacterial	DNA	recombination	protein
AAA_17	PF13207.1	gi|297526964|ref|YP_003668988.1|	-	0.041	14.7	0.6	0.12	13.2	0.4	1.9	1	1	0	1	1	1	0	AAA	domain
RNA_helicase	PF00910.17	gi|297526964|ref|YP_003668988.1|	-	0.043	13.9	0.0	0.082	13.0	0.0	1.5	1	0	0	1	1	1	0	RNA	helicase
MMR_HSR1	PF01926.18	gi|297526964|ref|YP_003668988.1|	-	0.054	13.4	0.1	0.081	12.8	0.0	1.3	1	0	0	1	1	1	0	50S	ribosome-binding	GTPase
IstB_IS21	PF01695.12	gi|297526964|ref|YP_003668988.1|	-	0.055	12.8	0.0	0.1	12.0	0.0	1.4	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
AAA_31	PF13614.1	gi|297526964|ref|YP_003668988.1|	-	0.083	12.8	0.1	0.31	10.9	0.0	2.0	1	1	0	1	1	1	0	AAA	domain
GvpD	PF07088.6	gi|297526964|ref|YP_003668988.1|	-	0.11	10.7	1.8	0.28	9.4	1.2	1.7	1	1	0	1	1	1	0	GvpD	gas	vesicle	protein
MobB	PF03205.9	gi|297526964|ref|YP_003668988.1|	-	0.12	12.0	0.1	0.4	10.3	0.0	1.8	1	1	1	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ATP11	PF06644.6	gi|297526965|ref|YP_003668989.1|	-	0.024	14.1	1.9	0.03	13.8	1.3	1.1	1	0	0	1	1	1	0	ATP11	protein
Glyco_tranf_2_2	PF10111.4	gi|297526965|ref|YP_003668989.1|	-	0.036	13.1	1.1	0.041	12.9	0.8	1.1	1	0	0	1	1	1	0	Glycosyltransferase	like	family	2
DUF243	PF03103.12	gi|297526965|ref|YP_003668989.1|	-	0.053	13.6	0.4	0.053	13.6	0.3	1.8	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF243)
His_biosynth	PF00977.16	gi|297526965|ref|YP_003668989.1|	-	0.089	12.0	0.2	0.12	11.5	0.1	1.3	1	0	0	1	1	1	0	Histidine	biosynthesis	protein
DUF3888	PF13027.1	gi|297526965|ref|YP_003668989.1|	-	0.1	12.4	3.1	0.22	11.4	1.6	2.0	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3888)
ADSL_C	PF10397.4	gi|297526965|ref|YP_003668989.1|	-	0.11	12.4	0.7	0.62	10.1	0.2	2.1	3	0	0	3	3	3	0	Adenylosuccinate	lyase	C-terminus
DHHA1	PF02272.14	gi|297526966|ref|YP_003668990.1|	-	2.7e-08	33.3	0.2	5.9e-08	32.3	0.1	1.6	1	0	0	1	1	1	1	DHHA1	domain
DHH	PF01368.15	gi|297526966|ref|YP_003668990.1|	-	1e-06	28.4	0.1	1.8e-06	27.6	0.0	1.4	1	0	0	1	1	1	1	DHH	family
ATP-grasp_2	PF08442.5	gi|297526966|ref|YP_003668990.1|	-	0.08	12.3	0.2	0.3	10.4	0.1	1.8	2	0	0	2	2	2	0	ATP-grasp	domain
DUF429	PF04250.8	gi|297526967|ref|YP_003668991.1|	-	7.9e-22	77.5	0.0	1e-21	77.2	0.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF429)
Glutaredoxin	PF00462.19	gi|297526967|ref|YP_003668991.1|	-	0.066	13.2	0.2	0.3	11.1	0.1	2.0	3	0	0	3	3	3	0	Glutaredoxin
DAO	PF01266.19	gi|297526968|ref|YP_003668992.1|	-	2.2e-11	43.2	0.9	2.2e-06	26.8	0.6	2.2	2	0	0	2	2	2	2	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|297526968|ref|YP_003668992.1|	-	1.9e-10	40.1	0.1	8.6e-08	31.4	0.3	2.4	2	0	0	2	2	2	2	FAD	binding	domain
FAD_binding_3	PF01494.14	gi|297526968|ref|YP_003668992.1|	-	4e-10	39.2	0.7	3.3e-05	23.1	0.1	3.1	3	0	0	3	3	3	2	FAD	binding	domain
Lycopene_cycl	PF05834.7	gi|297526968|ref|YP_003668992.1|	-	7.6e-09	34.9	0.0	6e-08	31.9	0.0	2.0	2	0	0	2	2	2	1	Lycopene	cyclase	protein
FAD_oxidored	PF12831.2	gi|297526968|ref|YP_003668992.1|	-	3.9e-08	32.8	0.8	2.7e-07	30.0	0.6	2.1	1	1	0	1	1	1	1	FAD	dependent	oxidoreductase
Pyr_redox_2	PF07992.9	gi|297526968|ref|YP_003668992.1|	-	1.7e-07	31.3	0.1	6.3e-07	29.4	0.0	2.1	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Thi4	PF01946.12	gi|297526968|ref|YP_003668992.1|	-	2.1e-07	30.2	0.3	4.5e-07	29.2	0.2	1.5	1	0	0	1	1	1	1	Thi4	family
HI0933_like	PF03486.9	gi|297526968|ref|YP_003668992.1|	-	5e-07	28.5	0.6	6.6e-05	21.5	0.2	2.4	2	0	0	2	2	2	2	HI0933-like	protein
GIDA	PF01134.17	gi|297526968|ref|YP_003668992.1|	-	1.3e-06	27.5	0.3	2.1e-06	26.8	0.2	1.3	1	0	0	1	1	1	1	Glucose	inhibited	division	protein	A
Trp_halogenase	PF04820.9	gi|297526968|ref|YP_003668992.1|	-	5.3e-06	25.3	0.1	0.017	13.7	0.0	2.4	2	0	0	2	2	2	2	Tryptophan	halogenase
NAD_binding_8	PF13450.1	gi|297526968|ref|YP_003668992.1|	-	1.1e-05	25.3	1.0	3.8e-05	23.6	0.2	2.3	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox	PF00070.22	gi|297526968|ref|YP_003668992.1|	-	5.7e-05	23.4	1.1	0.00073	19.9	0.2	2.4	2	0	0	2	2	2	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|297526968|ref|YP_003668992.1|	-	0.00021	21.4	0.9	0.002	18.2	0.2	2.5	3	0	0	3	3	3	1	Pyridine	nucleotide-disulphide	oxidoreductase
3HCDH_N	PF02737.13	gi|297526968|ref|YP_003668992.1|	-	0.0032	17.1	0.2	0.0055	16.3	0.1	1.3	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
AlaDh_PNT_C	PF01262.16	gi|297526968|ref|YP_003668992.1|	-	0.016	14.8	0.4	0.055	13.0	0.1	1.9	2	0	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
UDPG_MGDP_dh_N	PF03721.9	gi|297526968|ref|YP_003668992.1|	-	0.079	12.3	0.1	0.18	11.1	0.1	1.5	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
K_oxygenase	PF13434.1	gi|297526968|ref|YP_003668992.1|	-	0.15	10.9	0.1	4.8	6.0	0.0	2.3	2	0	0	2	2	2	0	L-lysine	6-monooxygenase	(NADPH-requiring)
Amino_oxidase	PF01593.19	gi|297526968|ref|YP_003668992.1|	-	0.17	10.9	0.0	0.46	9.5	0.0	1.7	2	0	0	2	2	2	0	Flavin	containing	amine	oxidoreductase
MobB	PF03205.9	gi|297526969|ref|YP_003668993.1|	-	1.1e-10	41.3	0.0	1.7e-10	40.7	0.0	1.3	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
CbiA	PF01656.18	gi|297526969|ref|YP_003668993.1|	-	0.018	14.4	0.0	0.026	13.9	0.0	1.4	1	0	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_26	PF13500.1	gi|297526969|ref|YP_003668993.1|	-	0.028	14.0	0.0	0.043	13.4	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
PYNP_C	PF07831.8	gi|297526970|ref|YP_003668994.1|	-	2.4e-17	62.1	0.6	3.4e-16	58.4	0.0	2.5	2	0	0	2	2	2	1	Pyrimidine	nucleoside	phosphorylase	C-terminal	domain
Glycos_transf_3	PF00591.16	gi|297526970|ref|YP_003668994.1|	-	1.8e-11	43.9	0.3	5.4e-10	39.0	0.4	2.6	2	1	0	2	2	2	1	Glycosyl	transferase	family,	a/b	domain
Glycos_trans_3N	PF02885.12	gi|297526970|ref|YP_003668994.1|	-	5.6e-10	38.6	2.0	9e-10	38.0	0.1	2.4	3	0	0	3	3	3	1	Glycosyl	transferase	family,	helical	bundle	domain
DUF2254	PF10011.4	gi|297526970|ref|YP_003668994.1|	-	0.00088	17.8	0.0	0.0014	17.1	0.0	1.2	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2254)
CDC48_N	PF02359.13	gi|297526970|ref|YP_003668994.1|	-	0.0014	18.5	0.0	0.0029	17.4	0.0	1.6	1	0	0	1	1	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
OprF	PF05736.6	gi|297526970|ref|YP_003668994.1|	-	0.1	12.1	0.0	0.3	10.6	0.0	1.7	1	1	1	2	2	2	0	OprF	membrane	domain
CBS	PF00571.23	gi|297526971|ref|YP_003668995.1|	-	3.7e-15	55.4	0.8	8.6e-07	28.6	0.2	2.2	2	0	0	2	2	2	2	CBS	domain
Peptidase_C39_2	PF13529.1	gi|297526971|ref|YP_003668995.1|	-	0.04	14.2	0.1	0.085	13.2	0.0	1.6	2	0	0	2	2	2	0	Peptidase_C39	like	family
Arch_ATPase	PF01637.13	gi|297526971|ref|YP_003668995.1|	-	0.07	12.8	0.4	3	7.4	0.1	2.1	1	1	1	2	2	2	0	Archaeal	ATPase
Glyco_trans_4_2	PF13477.1	gi|297526972|ref|YP_003668996.1|	-	0.0021	17.9	0.0	0.0044	16.8	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	4-like
CDC50	PF03381.10	gi|297526972|ref|YP_003668996.1|	-	0.017	14.2	0.1	0.081	12.0	0.0	2.0	3	0	0	3	3	3	0	LEM3	(ligand-effect	modulator	3)	family	/	CDC50	family
Amidohydro_3	PF07969.6	gi|297526973|ref|YP_003668997.1|	-	2e-65	221.5	0.0	2.5e-65	221.2	0.0	1.0	1	0	0	1	1	1	1	Amidohydrolase	family
Amidohydro_5	PF13594.1	gi|297526973|ref|YP_003668997.1|	-	0.00085	19.0	0.1	0.0033	17.1	0.0	2.1	2	0	0	2	2	2	1	Amidohydrolase
Amidohydro_1	PF01979.15	gi|297526973|ref|YP_003668997.1|	-	0.0036	17.0	0.3	1.6	8.3	0.0	2.3	2	0	0	2	2	2	2	Amidohydrolase	family
GRAB	PF10375.4	gi|297526974|ref|YP_003668998.1|	-	0.21	11.3	1.7	6.3	6.6	0.1	2.3	2	0	0	2	2	2	0	GRIP-related	Arf-binding	domain
PGM_PMM_I	PF02878.11	gi|297526975|ref|YP_003668999.1|	-	1e-30	106.0	0.0	3.2e-30	104.3	0.0	1.8	2	0	0	2	2	2	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_II	PF02879.11	gi|297526975|ref|YP_003668999.1|	-	5.3e-19	68.4	0.0	1.5e-18	67.0	0.0	1.8	2	0	0	2	2	2	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_IV	PF00408.15	gi|297526975|ref|YP_003668999.1|	-	2.8e-10	40.0	0.1	6.4e-10	38.8	0.0	1.6	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
PGM_PMM_III	PF02880.11	gi|297526975|ref|YP_003668999.1|	-	0.0083	16.1	0.0	0.02	14.9	0.0	1.6	1	1	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
AdoMet_dc	PF02675.10	gi|297526976|ref|YP_003669000.1|	-	4.7e-32	110.0	0.0	5.5e-32	109.8	0.0	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	decarboxylase
NAD_binding_8	PF13450.1	gi|297526977|ref|YP_003669001.1|	-	0.006	16.5	0.9	0.011	15.6	0.0	2.0	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox_2	PF07992.9	gi|297526977|ref|YP_003669001.1|	-	0.0062	16.4	0.0	0.01	15.7	0.0	1.5	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
HI0933_like	PF03486.9	gi|297526977|ref|YP_003669001.1|	-	0.0066	14.9	0.0	0.0091	14.5	0.0	1.1	1	0	0	1	1	1	1	HI0933-like	protein
FAD_binding_3	PF01494.14	gi|297526977|ref|YP_003669001.1|	-	0.034	13.2	0.0	0.15	11.0	0.0	1.9	2	0	0	2	2	2	0	FAD	binding	domain
Pyr_redox	PF00070.22	gi|297526977|ref|YP_003669001.1|	-	0.063	13.6	0.0	9.3	6.7	0.0	2.4	2	0	0	2	2	2	0	Pyridine	nucleotide-disulphide	oxidoreductase
AsnC_trans_reg	PF01037.16	gi|297526978|ref|YP_003669002.1|	-	5.5e-05	22.7	0.1	0.0012	18.5	0.0	2.1	2	0	0	2	2	2	2	AsnC	family
TPP_enzyme_C	PF02775.16	gi|297526979|ref|YP_003669003.1|	-	2.7e-24	85.4	0.0	3.6e-24	85.0	0.0	1.2	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
POR_N	PF01855.14	gi|297526980|ref|YP_003669004.1|	-	1.3e-74	250.5	0.2	1.8e-74	250.1	0.1	1.1	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Transketolase_C	PF02780.15	gi|297526980|ref|YP_003669004.1|	-	0.00018	21.4	0.0	0.00047	20.0	0.0	1.7	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
RecO_N	PF11967.3	gi|297526980|ref|YP_003669004.1|	-	0.069	13.0	0.0	0.16	11.8	0.0	1.6	1	0	0	1	1	1	0	Recombination	protein	O	N	terminal
Fer4	PF00037.22	gi|297526981|ref|YP_003669005.1|	-	9.6e-15	53.4	16.8	7.1e-09	34.9	4.0	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_10	PF13237.1	gi|297526981|ref|YP_003669005.1|	-	5.9e-11	41.9	21.7	7.8e-08	31.9	8.0	1.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|297526981|ref|YP_003669005.1|	-	1e-10	41.2	9.9	1.3e-10	40.9	6.8	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|297526981|ref|YP_003669005.1|	-	2.1e-09	36.8	15.1	2.4e-06	27.1	3.2	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|297526981|ref|YP_003669005.1|	-	9.4e-09	35.5	10.2	1.4e-08	34.9	7.1	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|297526981|ref|YP_003669005.1|	-	1.1e-08	34.4	11.5	0.00034	20.3	1.6	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|297526981|ref|YP_003669005.1|	-	6e-08	32.8	19.3	7.5e-06	26.1	8.5	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|297526981|ref|YP_003669005.1|	-	2.8e-07	31.1	8.8	9.6e-05	23.0	1.8	2.3	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_18	PF13746.1	gi|297526981|ref|YP_003669005.1|	-	0.00011	22.4	5.6	0.052	13.9	0.1	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|297526981|ref|YP_003669005.1|	-	0.0005	20.3	12.2	0.0022	18.3	0.8	2.5	2	1	1	3	3	3	2	4Fe-4S	single	cluster	domain
Fer4_4	PF12800.2	gi|297526981|ref|YP_003669005.1|	-	0.00055	20.0	11.4	0.026	14.8	0.8	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|297526981|ref|YP_003669005.1|	-	0.00067	19.9	8.3	0.21	11.9	1.5	2.1	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|297526981|ref|YP_003669005.1|	-	0.00073	20.0	11.5	0.062	13.8	2.3	2.6	2	1	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_8	PF13183.1	gi|297526981|ref|YP_003669005.1|	-	0.00099	19.0	10.8	0.065	13.2	8.2	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_11	PF13247.1	gi|297526981|ref|YP_003669005.1|	-	0.076	12.9	5.4	0.12	12.2	3.8	1.3	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|297526981|ref|YP_003669005.1|	-	0.14	12.8	7.2	0.14	12.8	5.0	2.4	2	0	0	2	2	2	0	4Fe-4S	binding	domain
POR	PF01558.13	gi|297526982|ref|YP_003669006.1|	-	6.1e-41	140.1	0.0	7.2e-41	139.9	0.0	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
PIG-P	PF08510.7	gi|297526983|ref|YP_003669007.1|	-	0.002	17.7	0.9	0.013	15.0	0.6	1.9	1	1	0	1	1	1	1	PIG-P
Cytochrom_B_C	PF00032.12	gi|297526983|ref|YP_003669007.1|	-	0.0054	16.9	1.1	0.0065	16.6	0.8	1.1	1	0	0	1	1	1	1	Cytochrome	b(C-terminal)/b6/petD
DUF1510	PF07423.6	gi|297526983|ref|YP_003669007.1|	-	0.0073	15.6	0.8	0.0073	15.6	0.6	1.8	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF1510)
DUF2254	PF10011.4	gi|297526983|ref|YP_003669007.1|	-	0.0087	14.5	0.0	0.0087	14.5	0.0	1.8	2	0	0	2	2	2	1	Predicted	membrane	protein	(DUF2254)
Ycf1	PF05758.7	gi|297526983|ref|YP_003669007.1|	-	0.04	11.6	0.1	0.042	11.5	0.0	1.0	1	0	0	1	1	1	0	Ycf1
DUF4131	PF13567.1	gi|297526983|ref|YP_003669007.1|	-	0.063	12.6	0.0	0.073	12.4	0.0	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
DUF1469	PF07332.6	gi|297526983|ref|YP_003669007.1|	-	0.063	13.0	0.0	0.09	12.5	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1469)
DUF3007	PF11460.3	gi|297526983|ref|YP_003669007.1|	-	0.065	13.3	0.5	0.12	12.4	0.3	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3007)
SHR3_chaperone	PF08229.6	gi|297526983|ref|YP_003669007.1|	-	0.073	12.0	0.0	0.073	12.0	0.0	1.4	2	0	0	2	2	2	0	ER	membrane	protein	SH3
DPM2	PF07297.7	gi|297526983|ref|YP_003669007.1|	-	0.11	12.7	4.4	0.15	12.3	2.9	1.4	1	1	0	1	1	1	0	Dolichol	phosphate-mannose	biosynthesis	regulatory	protein	(DPM2)
IncA	PF04156.9	gi|297526983|ref|YP_003669007.1|	-	5.6	6.5	11.0	11	5.5	7.6	1.6	1	1	0	1	1	1	0	IncA	protein
DUF1236	PF06823.7	gi|297526984|ref|YP_003669008.1|	-	0.049	13.3	0.8	0.074	12.7	0.6	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1236)
POR_N	PF01855.14	gi|297526985|ref|YP_003669009.1|	-	1.5e-49	168.5	0.0	2.3e-49	167.9	0.0	1.3	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
POR	PF01558.13	gi|297526985|ref|YP_003669009.1|	-	7.8e-36	123.5	0.0	1.5e-35	122.6	0.0	1.5	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
Transketolase_C	PF02780.15	gi|297526985|ref|YP_003669009.1|	-	2.9e-08	33.7	0.0	8.6e-08	32.1	0.0	1.7	2	0	0	2	2	2	1	Transketolase,	C-terminal	domain
TPP_enzyme_N	PF02776.13	gi|297526985|ref|YP_003669009.1|	-	0.00016	21.1	0.5	0.0003	20.3	0.3	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	N-terminal	TPP	binding	domain
TPP_enzyme_C	PF02775.16	gi|297526986|ref|YP_003669010.1|	-	4.4e-28	97.7	0.2	6.6e-28	97.2	0.1	1.3	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
PFO_beta_C	PF12367.3	gi|297526986|ref|YP_003669010.1|	-	2.2e-27	94.7	0.1	3.9e-27	93.9	0.0	1.4	1	0	0	1	1	1	1	Pyruvate	ferredoxin	oxidoreductase	beta	subunit	C	terminal
PadR	PF03551.9	gi|297526987|ref|YP_003669011.1|	-	4.7e-10	39.0	0.7	8.1e-10	38.3	0.5	1.4	1	0	0	1	1	1	1	Transcriptional	regulator	PadR-like	family
FUR	PF01475.14	gi|297526987|ref|YP_003669011.1|	-	0.0023	17.8	0.2	0.054	13.4	0.0	2.2	2	0	0	2	2	2	1	Ferric	uptake	regulator	family
HTH_34	PF13601.1	gi|297526987|ref|YP_003669011.1|	-	0.0025	17.8	0.0	0.0047	16.9	0.0	1.4	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|297526987|ref|YP_003669011.1|	-	0.015	14.9	0.0	0.036	13.7	0.0	1.7	1	0	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
MarR	PF01047.17	gi|297526987|ref|YP_003669011.1|	-	0.019	14.6	0.0	0.27	10.9	0.0	2.2	2	0	0	2	2	2	0	MarR	family
DUF387	PF04079.11	gi|297526987|ref|YP_003669011.1|	-	0.11	11.9	0.0	0.21	10.9	0.0	1.5	1	0	0	1	1	1	0	Putative	transcriptional	regulators	(Ypuh-like)
Cdc6_C	PF09079.6	gi|297526987|ref|YP_003669011.1|	-	0.16	11.7	0.9	0.69	9.6	0.1	2.1	1	1	0	2	2	2	0	CDC6,	C	terminal
MatE	PF01554.13	gi|297526988|ref|YP_003669012.1|	-	1.3e-68	229.7	37.4	2.9e-35	121.2	7.2	2.7	3	0	0	3	3	3	2	MatE
Polysacc_synt_C	PF14667.1	gi|297526988|ref|YP_003669012.1|	-	7.8e-07	28.9	47.7	0.0002	21.2	11.1	4.1	3	2	0	3	3	3	2	Polysaccharide	biosynthesis	C-terminal	domain
MacB_PCD	PF12704.2	gi|297526989|ref|YP_003669013.1|	-	1.8e-31	109.5	1.4	1.8e-31	109.5	1.0	2.8	3	0	0	3	3	3	1	MacB-like	periplasmic	core	domain
FtsX	PF02687.16	gi|297526989|ref|YP_003669013.1|	-	4.2e-17	62.0	14.6	4.2e-17	62.0	10.1	2.3	2	0	0	2	2	2	1	FtsX-like	permease	family
TcdA_TcdB_pore	PF12920.2	gi|297526989|ref|YP_003669013.1|	-	0.05	11.5	2.1	0.095	10.6	1.4	1.4	1	0	0	1	1	1	0	TcdA/TcdB	pore	forming	domain
NapD	PF03927.8	gi|297526989|ref|YP_003669013.1|	-	0.052	13.3	0.0	0.2	11.4	0.0	2.0	2	0	0	2	2	2	0	NapD	protein
Wzt_C	PF14524.1	gi|297526990|ref|YP_003669014.1|	-	1.7e-06	27.7	1.2	0.38	10.4	0.1	4.2	3	0	0	3	3	3	3	Wzt	C-terminal	domain
NPCBM_assoc	PF10633.4	gi|297526990|ref|YP_003669014.1|	-	5.5e-06	26.3	0.0	0.082	12.9	0.0	5.5	7	0	0	7	7	7	1	NPCBM-associated,	NEW3	domain	of	alpha-galactosidase
ABC_tran	PF00005.22	gi|297526991|ref|YP_003669015.1|	-	1.1e-33	116.4	0.0	1.5e-33	115.9	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297526991|ref|YP_003669015.1|	-	7.7e-12	45.7	0.1	6.3e-06	26.3	0.0	2.1	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|297526991|ref|YP_003669015.1|	-	4.2e-05	22.9	0.2	0.0019	17.5	0.1	2.1	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
AAA_18	PF13238.1	gi|297526991|ref|YP_003669015.1|	-	0.00018	21.8	1.6	0.063	13.5	0.8	2.4	1	1	1	2	2	2	1	AAA	domain
AAA_15	PF13175.1	gi|297526991|ref|YP_003669015.1|	-	0.00046	19.3	0.0	0.5	9.3	0.0	2.1	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_29	PF13555.1	gi|297526991|ref|YP_003669015.1|	-	0.00074	18.9	0.1	0.0015	17.9	0.1	1.5	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.1	gi|297526991|ref|YP_003669015.1|	-	0.0011	19.1	0.0	0.0067	16.5	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_10	PF12846.2	gi|297526991|ref|YP_003669015.1|	-	0.0021	17.5	0.1	0.015	14.7	0.1	2.0	2	0	0	2	2	2	1	AAA-like	domain
AAA_25	PF13481.1	gi|297526991|ref|YP_003669015.1|	-	0.0047	16.3	0.0	0.034	13.5	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
DUF258	PF03193.11	gi|297526991|ref|YP_003669015.1|	-	0.0048	16.1	0.1	0.0097	15.1	0.0	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_16	PF13191.1	gi|297526991|ref|YP_003669015.1|	-	0.0058	16.6	0.1	0.0097	15.9	0.1	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_17	PF13207.1	gi|297526991|ref|YP_003669015.1|	-	0.011	16.6	0.6	0.02	15.7	0.4	1.9	1	1	0	1	1	1	0	AAA	domain
AAA_23	PF13476.1	gi|297526991|ref|YP_003669015.1|	-	0.011	16.0	0.1	0.028	14.7	0.1	1.6	1	0	0	1	1	1	0	AAA	domain
cobW	PF02492.14	gi|297526991|ref|YP_003669015.1|	-	0.021	14.2	0.1	0.035	13.5	0.0	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
SbcCD_C	PF13558.1	gi|297526991|ref|YP_003669015.1|	-	0.023	14.6	0.0	0.14	12.0	0.0	2.0	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
AAA_14	PF13173.1	gi|297526991|ref|YP_003669015.1|	-	0.027	14.3	0.0	0.084	12.7	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
T2SE	PF00437.15	gi|297526991|ref|YP_003669015.1|	-	0.039	12.8	0.0	0.057	12.3	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
RNA12	PF10443.4	gi|297526991|ref|YP_003669015.1|	-	0.04	12.4	0.0	0.058	11.8	0.0	1.2	1	0	0	1	1	1	0	RNA12	protein
Arch_ATPase	PF01637.13	gi|297526991|ref|YP_003669015.1|	-	0.04	13.6	0.3	0.086	12.5	0.2	1.8	1	1	0	1	1	1	0	Archaeal	ATPase
NACHT	PF05729.7	gi|297526991|ref|YP_003669015.1|	-	0.044	13.4	0.3	0.1	12.2	0.1	1.7	1	1	1	2	2	2	0	NACHT	domain
T4SS-DNA_transf	PF02534.9	gi|297526991|ref|YP_003669015.1|	-	0.044	12.3	0.1	0.06	11.9	0.0	1.2	1	0	0	1	1	1	0	Type	IV	secretory	system	Conjugative	DNA	transfer
AAA_33	PF13671.1	gi|297526991|ref|YP_003669015.1|	-	0.045	13.6	0.1	0.066	13.0	0.1	1.7	1	1	0	1	1	1	0	AAA	domain
MMR_HSR1	PF01926.18	gi|297526991|ref|YP_003669015.1|	-	0.056	13.4	0.1	1.2	9.1	0.0	2.2	2	1	0	2	2	2	0	50S	ribosome-binding	GTPase
NTPase_1	PF03266.10	gi|297526991|ref|YP_003669015.1|	-	0.083	12.5	1.0	3.1	7.4	0.0	2.5	3	0	0	3	3	3	0	NTPase
NB-ARC	PF00931.17	gi|297526991|ref|YP_003669015.1|	-	0.089	11.6	0.1	0.18	10.6	0.1	1.4	1	0	0	1	1	1	0	NB-ARC	domain
Hydrolase	PF00702.21	gi|297526991|ref|YP_003669015.1|	-	0.097	13.0	0.0	0.12	12.7	0.0	1.2	1	0	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
PduV-EutP	PF10662.4	gi|297526991|ref|YP_003669015.1|	-	0.11	11.9	0.1	1.4	8.4	0.0	2.6	3	0	0	3	3	3	0	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_24	PF13479.1	gi|297526991|ref|YP_003669015.1|	-	0.11	12.0	0.0	0.18	11.3	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
MobB	PF03205.9	gi|297526991|ref|YP_003669015.1|	-	0.12	12.1	0.0	0.25	11.0	0.0	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_19	PF13245.1	gi|297526991|ref|YP_003669015.1|	-	0.14	11.9	0.0	0.33	10.7	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
Spermine_synth	PF01564.12	gi|297526992|ref|YP_003669016.1|	-	1.3e-72	243.6	0.1	1.8e-72	243.2	0.1	1.0	1	0	0	1	1	1	1	Spermine/spermidine	synthase
Methyltransf_26	PF13659.1	gi|297526992|ref|YP_003669016.1|	-	5.7e-06	26.3	0.0	8.2e-06	25.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|297526992|ref|YP_003669016.1|	-	6.9e-05	22.4	0.0	0.00012	21.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
DUF43	PF01861.11	gi|297526992|ref|YP_003669016.1|	-	0.00018	20.5	0.7	0.03	13.2	0.1	2.2	1	1	1	2	2	2	2	Protein	of	unknown	function	DUF43
Methyltransf_11	PF08241.7	gi|297526992|ref|YP_003669016.1|	-	0.00024	21.5	0.0	0.00046	20.6	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|297526992|ref|YP_003669016.1|	-	0.0015	19.0	0.0	0.0053	17.1	0.0	1.9	1	1	1	2	2	2	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|297526992|ref|YP_003669016.1|	-	0.0094	16.5	0.0	0.018	15.5	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_30	PF05430.6	gi|297526992|ref|YP_003669016.1|	-	0.013	15.2	0.0	0.021	14.5	0.0	1.3	1	0	0	1	1	1	0	S-adenosyl-L-methionine-dependent	methyltransferase
Methyltransf_4	PF02390.12	gi|297526992|ref|YP_003669016.1|	-	0.026	13.5	0.0	0.035	13.1	0.0	1.2	1	0	0	1	1	1	0	Putative	methyltransferase
MTS	PF05175.9	gi|297526992|ref|YP_003669016.1|	-	0.033	13.5	0.0	0.05	12.9	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	small	domain
DUF3841	PF12952.2	gi|297526992|ref|YP_003669016.1|	-	0.045	13.1	0.7	0.58	9.5	0.1	2.2	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3841)
Methyltransf_2	PF00891.13	gi|297526992|ref|YP_003669016.1|	-	0.12	11.5	0.0	0.22	10.6	0.0	1.6	1	1	0	1	1	1	0	O-methyltransferase
DNA_ligase_A_M	PF01068.16	gi|297526993|ref|YP_003669017.1|	-	1.7e-20	73.2	0.7	2.8e-20	72.5	0.5	1.3	1	0	0	1	1	1	1	ATP	dependent	DNA	ligase	domain
RNA_ligase	PF09414.5	gi|297526993|ref|YP_003669017.1|	-	6.6e-06	26.0	0.2	1.5e-05	24.9	0.1	1.6	1	1	0	1	1	1	1	RNA	ligase
RNA_lig_T4_1	PF09511.5	gi|297526994|ref|YP_003669018.1|	-	0.056	12.9	0.3	0.061	12.7	0.2	1.0	1	0	0	1	1	1	0	RNA	ligase
IF2_N	PF04760.10	gi|297526995|ref|YP_003669019.1|	-	0.1	12.2	4.5	0.09	12.4	1.2	2.1	2	0	0	2	2	2	0	Translation	initiation	factor	IF-2,	N-terminal	region
Hydrolase_3	PF08282.7	gi|297526995|ref|YP_003669019.1|	-	0.13	11.8	1.0	0.18	11.3	0.7	1.2	1	0	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
DUF72	PF01904.13	gi|297526996|ref|YP_003669020.1|	-	2.7e-49	168.0	0.7	3e-49	167.8	0.5	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF72
Nol1_Nop2_Fmu	PF01189.12	gi|297526997|ref|YP_003669021.1|	-	2.5e-42	145.2	0.0	3.3e-42	144.8	0.0	1.0	1	0	0	1	1	1	1	NOL1/NOP2/sun	family
FtsJ	PF01728.14	gi|297526997|ref|YP_003669021.1|	-	0.013	15.4	0.0	0.02	14.8	0.0	1.5	1	1	0	1	1	1	0	FtsJ-like	methyltransferase
UPF0113	PF03657.8	gi|297526998|ref|YP_003669022.1|	-	3.3e-09	36.5	0.7	4.1e-09	36.2	0.5	1.2	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0113)
Na_H_Exchanger	PF00999.16	gi|297526999|ref|YP_003669023.1|	-	1.3e-58	198.3	52.6	1.5e-58	198.1	36.5	1.0	1	0	0	1	1	1	1	Sodium/hydrogen	exchanger	family
Peptidase_M50	PF02163.17	gi|297526999|ref|YP_003669023.1|	-	0.056	12.3	0.8	0.16	10.8	0.5	2.2	1	1	0	1	1	1	0	Peptidase	family	M50
CxxCxxCC	PF03692.10	gi|297527000|ref|YP_003669024.1|	-	6.2e-07	29.8	0.8	1.4e-06	28.7	0.6	1.5	1	1	0	1	1	1	1	Putative	zinc-	or	iron-chelating	domain
DUF3962	PF13111.1	gi|297527000|ref|YP_003669024.1|	-	0.022	14.1	0.1	0.039	13.3	0.1	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF3962)
Biotin_lipoyl	PF00364.17	gi|297527002|ref|YP_003669026.1|	-	1.9e-18	65.8	5.0	1.9e-18	65.8	3.4	1.9	2	0	0	2	2	2	1	Biotin-requiring	enzyme
Biotin_lipoyl_2	PF13533.1	gi|297527002|ref|YP_003669026.1|	-	7.3e-14	51.1	1.9	3.8e-07	29.6	0.1	2.5	1	1	1	2	2	2	2	Biotin-lipoyl	like
HlyD_3	PF13437.1	gi|297527002|ref|YP_003669026.1|	-	4.2e-08	33.4	0.8	0.00092	19.5	0.0	3.3	3	1	0	3	3	3	2	HlyD	family	secretion	protein
HlyD	PF00529.15	gi|297527002|ref|YP_003669026.1|	-	4.3e-07	29.5	0.6	0.0058	15.9	0.1	2.2	2	0	0	2	2	2	2	HlyD	family	secretion	protein
HlyD_2	PF12700.2	gi|297527002|ref|YP_003669026.1|	-	1.2e-06	27.9	4.1	0.0056	15.8	0.0	2.9	2	1	1	3	3	3	2	HlyD	family	secretion	protein
GCV_H	PF01597.14	gi|297527002|ref|YP_003669026.1|	-	1.6e-06	27.7	1.3	1.6e-06	27.7	0.9	2.1	2	1	0	2	2	2	1	Glycine	cleavage	H-protein
RnfC_N	PF13375.1	gi|297527002|ref|YP_003669026.1|	-	0.0096	15.6	2.5	0.033	13.8	0.7	2.5	2	1	0	2	2	2	1	RnfC	Barrel	sandwich	hybrid	domain
Peptidase_M23	PF01551.17	gi|297527002|ref|YP_003669026.1|	-	0.017	15.1	0.3	0.26	11.3	0.1	2.7	2	1	0	2	2	2	0	Peptidase	family	M23
PTS_EIIA_1	PF00358.15	gi|297527002|ref|YP_003669026.1|	-	0.029	13.9	0.5	1.1	8.8	0.2	2.9	1	1	1	2	2	2	0	phosphoenolpyruvate-dependent	sugar	phosphotransferase	system,	EIIA	1
PASTA	PF03793.14	gi|297527002|ref|YP_003669026.1|	-	0.092	12.4	0.8	0.62	9.7	0.0	2.5	3	0	0	3	3	3	0	PASTA	domain
Carboxyl_trans	PF01039.17	gi|297527003|ref|YP_003669027.1|	-	2.2e-190	633.2	0.1	2.5e-190	633.0	0.0	1.0	1	0	0	1	1	1	1	Carboxyl	transferase	domain
MdcE	PF06833.6	gi|297527003|ref|YP_003669027.1|	-	6.4e-07	28.8	0.0	1.4e-06	27.6	0.0	1.5	2	0	0	2	2	2	1	Malonate	decarboxylase	gamma	subunit	(MdcE)
Thiolase_C	PF02803.13	gi|297527004|ref|YP_003669028.1|	-	1.5e-11	43.7	0.0	3.2e-11	42.7	0.0	1.6	1	0	0	1	1	1	1	Thiolase,	C-terminal	domain
Thiolase_N	PF00108.18	gi|297527004|ref|YP_003669028.1|	-	1.4e-07	30.7	0.4	7.6e-07	28.3	0.0	2.2	2	1	1	3	3	3	1	Thiolase,	N-terminal	domain
ketoacyl-synt	PF00109.21	gi|297527004|ref|YP_003669028.1|	-	1.4e-06	27.9	0.4	3.8e-06	26.5	0.3	1.8	1	0	0	1	1	1	1	Beta-ketoacyl	synthase,	N-terminal	domain
Ketoacyl-synt_C	PF02801.17	gi|297527004|ref|YP_003669028.1|	-	8.6e-05	22.3	0.2	0.003	17.4	0.0	2.5	2	0	0	2	2	2	1	Beta-ketoacyl	synthase,	C-terminal	domain
ACP_syn_III	PF08545.5	gi|297527004|ref|YP_003669028.1|	-	0.083	12.5	2.0	12	5.6	0.0	3.0	3	0	0	3	3	3	0	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
zf-C2H2_4	PF13894.1	gi|297527005|ref|YP_003669029.1|	-	0.15	12.4	0.1	0.24	11.7	0.1	1.3	1	0	0	1	1	1	0	C2H2-type	zinc	finger
Transglut_core	PF01841.14	gi|297527006|ref|YP_003669030.1|	-	1.8e-12	47.4	0.0	2.9e-12	46.7	0.0	1.3	1	0	0	1	1	1	1	Transglutaminase-like	superfamily
PqqD	PF05402.7	gi|297527007|ref|YP_003669031.1|	-	4.6e-10	39.3	0.1	6e-10	38.9	0.1	1.2	1	0	0	1	1	1	1	Coenzyme	PQQ	synthesis	protein	D	(PqqD)
tRNA_anti-codon	PF01336.20	gi|297527008|ref|YP_003669032.1|	-	1.8e-08	34.0	0.2	5.6e-08	32.5	0.1	1.7	1	1	1	2	2	2	1	OB-fold	nucleic	acid	binding	domain
DUF123	PF01986.11	gi|297527010|ref|YP_003669034.1|	-	5.3e-27	93.8	0.0	7.2e-27	93.4	0.0	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF123
AAA_5	PF07728.9	gi|297527012|ref|YP_003669036.1|	-	4.2e-28	97.7	0.0	4.6e-27	94.4	0.0	2.3	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA_3	PF07726.6	gi|297527012|ref|YP_003669036.1|	-	6.5e-06	25.7	0.0	1.3e-05	24.8	0.0	1.5	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.1	gi|297527012|ref|YP_003669036.1|	-	1.6e-05	24.9	0.1	6.8e-05	22.9	0.0	2.1	2	1	1	3	3	3	1	AAA	ATPase	domain
AAA	PF00004.24	gi|297527012|ref|YP_003669036.1|	-	4.2e-05	23.7	0.1	0.00039	20.6	0.0	2.4	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Mg_chelatase	PF01078.16	gi|297527012|ref|YP_003669036.1|	-	0.00021	20.5	0.0	0.00053	19.2	0.0	1.6	1	0	0	1	1	1	1	Magnesium	chelatase,	subunit	ChlI
AAA_22	PF13401.1	gi|297527012|ref|YP_003669036.1|	-	0.0006	19.9	1.2	0.013	15.6	0.0	2.9	2	1	0	2	2	2	1	AAA	domain
MCM	PF00493.18	gi|297527012|ref|YP_003669036.1|	-	0.0037	16.1	0.1	0.014	14.2	0.0	1.9	2	0	0	2	2	2	1	MCM2/3/5	family
AAA_17	PF13207.1	gi|297527012|ref|YP_003669036.1|	-	0.017	15.9	0.7	0.28	12.0	0.5	2.8	1	1	0	1	1	1	0	AAA	domain
AAA_19	PF13245.1	gi|297527012|ref|YP_003669036.1|	-	0.022	14.4	0.0	0.077	12.7	0.0	1.9	1	0	0	1	1	1	0	Part	of	AAA	domain
Sigma54_activat	PF00158.21	gi|297527012|ref|YP_003669036.1|	-	0.029	13.8	0.0	0.24	10.8	0.0	2.3	1	1	0	1	1	1	0	Sigma-54	interaction	domain
NTPase_1	PF03266.10	gi|297527012|ref|YP_003669036.1|	-	0.041	13.5	0.4	15	5.2	0.0	3.1	3	0	0	3	3	3	0	NTPase
RuvB_N	PF05496.7	gi|297527012|ref|YP_003669036.1|	-	0.07	12.1	1.6	0.22	10.5	0.1	2.3	2	1	0	2	2	2	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
DUF4570	PF15134.1	gi|297527012|ref|YP_003669036.1|	-	0.26	11.1	2.3	0.44	10.4	0.4	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4570)
VWA_2	PF13519.1	gi|297527013|ref|YP_003669037.1|	-	2.5e-10	40.7	0.0	4.2e-10	39.9	0.0	1.3	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA_CoxE	PF05762.9	gi|297527013|ref|YP_003669037.1|	-	2e-07	30.3	0.0	3.4e-07	29.6	0.0	1.2	1	0	0	1	1	1	1	VWA	domain	containing	CoxE-like	protein
VWA	PF00092.23	gi|297527013|ref|YP_003669037.1|	-	2.8e-07	30.4	1.3	3e-07	30.3	0.2	1.5	2	0	0	2	2	2	1	von	Willebrand	factor	type	A	domain
Sulfate_transp	PF00916.15	gi|297527013|ref|YP_003669037.1|	-	0.096	11.6	0.0	0.15	11.0	0.0	1.3	1	0	0	1	1	1	0	Sulfate	transporter	family
N-glycanase_N	PF09112.5	gi|297527014|ref|YP_003669038.1|	-	0.029	13.7	0.5	0.046	13.0	0.3	1.3	1	0	0	1	1	1	0	Peptide-N-glycosidase	F,	N	terminal
Sm_multidrug_ex	PF06695.6	gi|297527015|ref|YP_003669039.1|	-	1.4e-34	118.8	4.1	1.9e-34	118.4	2.8	1.1	1	0	0	1	1	1	1	Putative	small	multi-drug	export	protein
DHHA1	PF02272.14	gi|297527016|ref|YP_003669040.1|	-	0.00014	21.4	0.1	0.00028	20.5	0.1	1.5	1	0	0	1	1	1	1	DHHA1	domain
DHH	PF01368.15	gi|297527016|ref|YP_003669040.1|	-	0.00031	20.4	0.0	0.00061	19.4	0.0	1.5	1	0	0	1	1	1	1	DHH	family
LexA_DNA_bind	PF01726.11	gi|297527017|ref|YP_003669041.1|	-	3.1e-09	36.2	0.0	5.2e-09	35.5	0.0	1.4	1	0	0	1	1	1	1	LexA	DNA	binding	domain
TrmB	PF01978.14	gi|297527017|ref|YP_003669041.1|	-	3.6e-06	26.5	0.0	7e-06	25.6	0.0	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_20	PF12840.2	gi|297527017|ref|YP_003669041.1|	-	2.1e-05	24.2	0.0	3.3e-05	23.6	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_11	PF08279.7	gi|297527017|ref|YP_003669041.1|	-	0.00012	21.6	0.0	0.00027	20.5	0.0	1.6	1	0	0	1	1	1	1	HTH	domain
HTH_5	PF01022.15	gi|297527017|ref|YP_003669041.1|	-	0.0017	17.9	0.1	0.0033	17.0	0.1	1.5	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
MarR_2	PF12802.2	gi|297527017|ref|YP_003669041.1|	-	0.0034	17.0	0.0	0.006	16.2	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.1	gi|297527017|ref|YP_003669041.1|	-	0.0043	16.3	0.0	0.0084	15.4	0.0	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_IclR	PF09339.5	gi|297527017|ref|YP_003669041.1|	-	0.0087	15.6	0.0	0.015	14.9	0.0	1.4	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
TFIIE_beta	PF02186.10	gi|297527017|ref|YP_003669041.1|	-	0.025	14.5	0.1	0.059	13.3	0.0	1.7	2	0	0	2	2	2	0	TFIIE	beta	subunit	core	domain
HTH_12	PF08461.5	gi|297527017|ref|YP_003669041.1|	-	0.032	13.9	0.1	0.071	12.8	0.1	1.6	1	1	0	1	1	1	0	Ribonuclease	R	winged-helix	domain
MarR	PF01047.17	gi|297527017|ref|YP_003669041.1|	-	0.083	12.6	0.0	0.17	11.6	0.0	1.5	1	0	0	1	1	1	0	MarR	family
NS3_envE	PF02723.9	gi|297527017|ref|YP_003669041.1|	-	0.25	11.2	4.1	0.36	10.7	2.8	1.2	1	0	0	1	1	1	0	Non-structural	protein	NS3/Small	envelope	protein	E
PrgI	PF12666.2	gi|297527017|ref|YP_003669041.1|	-	1.3	9.2	4.7	3.2	7.9	3.2	1.7	1	1	0	1	1	1	0	PrgI	family	protein
Got1	PF04178.7	gi|297527018|ref|YP_003669042.1|	-	6.2	6.9	8.6	0.38	10.8	1.6	2.1	2	0	0	2	2	2	0	Got1/Sft2-like	family
Glyco_hydro_57	PF03065.10	gi|297527019|ref|YP_003669043.1|	-	2.7e-42	144.9	9.0	2.7e-42	144.9	6.3	2.1	2	1	1	3	3	3	1	Glycosyl	hydrolase	family	57
FtsX	PF02687.16	gi|297527021|ref|YP_003669045.1|	-	7e-15	54.8	10.0	7e-15	54.8	6.9	2.5	2	1	0	2	2	2	1	FtsX-like	permease	family
TcpE	PF12648.2	gi|297527021|ref|YP_003669045.1|	-	0.55	10.4	2.9	0.35	11.0	0.2	1.9	2	0	0	2	2	2	0	TcpE	family
ABC_tran	PF00005.22	gi|297527022|ref|YP_003669046.1|	-	3.4e-32	111.5	0.0	5.2e-32	110.9	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297527022|ref|YP_003669046.1|	-	1.9e-09	37.8	0.1	8.9e-05	22.5	0.0	2.2	1	1	1	2	2	2	2	AAA	domain
AAA_15	PF13175.1	gi|297527022|ref|YP_003669046.1|	-	1.9e-05	23.9	0.0	0.00022	20.4	0.0	2.0	2	0	0	2	2	2	1	AAA	ATPase	domain
SMC_N	PF02463.14	gi|297527022|ref|YP_003669046.1|	-	0.0002	20.6	0.2	0.13	11.4	0.0	2.2	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_29	PF13555.1	gi|297527022|ref|YP_003669046.1|	-	0.00033	20.1	0.1	0.00066	19.1	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.1	gi|297527022|ref|YP_003669046.1|	-	0.0015	18.6	0.4	0.3	11.2	0.0	2.9	2	1	1	3	3	3	1	AAA	domain
AAA_10	PF12846.2	gi|297527022|ref|YP_003669046.1|	-	0.0032	16.9	0.1	0.041	13.3	0.0	2.0	2	0	0	2	2	2	1	AAA-like	domain
DUF258	PF03193.11	gi|297527022|ref|YP_003669046.1|	-	0.004	16.3	0.0	0.0065	15.6	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
IstB_IS21	PF01695.12	gi|297527022|ref|YP_003669046.1|	-	0.005	16.2	0.0	0.012	15.0	0.0	1.6	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
T2SE	PF00437.15	gi|297527022|ref|YP_003669046.1|	-	0.0059	15.5	0.0	0.0099	14.8	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_23	PF13476.1	gi|297527022|ref|YP_003669046.1|	-	0.021	15.1	0.1	0.042	14.1	0.1	1.5	1	0	0	1	1	1	0	AAA	domain
AAA_17	PF13207.1	gi|297527022|ref|YP_003669046.1|	-	0.027	15.2	0.2	0.2	12.5	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
Polyoma_lg_T_C	PF06431.6	gi|297527022|ref|YP_003669046.1|	-	0.027	13.1	0.0	0.037	12.6	0.0	1.1	1	0	0	1	1	1	0	Polyomavirus	large	T	antigen	C-terminus
AAA	PF00004.24	gi|297527022|ref|YP_003669046.1|	-	0.03	14.5	0.4	3.3	7.9	0.0	2.6	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_33	PF13671.1	gi|297527022|ref|YP_003669046.1|	-	0.037	13.8	0.3	0.34	10.7	0.2	2.0	2	0	0	2	2	2	0	AAA	domain
NB-ARC	PF00931.17	gi|297527022|ref|YP_003669046.1|	-	0.072	11.9	0.2	0.11	11.2	0.2	1.3	1	0	0	1	1	1	0	NB-ARC	domain
AAA_16	PF13191.1	gi|297527022|ref|YP_003669046.1|	-	0.08	12.9	0.1	0.19	11.6	0.0	1.6	2	0	0	2	2	2	0	AAA	ATPase	domain
cobW	PF02492.14	gi|297527022|ref|YP_003669046.1|	-	0.13	11.6	0.3	0.31	10.4	0.1	1.7	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
ABC_tran	PF00005.22	gi|297527023|ref|YP_003669047.1|	-	3.1e-34	118.1	0.0	5.3e-34	117.4	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297527023|ref|YP_003669047.1|	-	4.2e-10	40.0	0.7	5.6e-06	26.5	0.0	2.2	1	1	0	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|297527023|ref|YP_003669047.1|	-	1.5e-05	24.3	0.1	0.0039	16.4	0.0	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|297527023|ref|YP_003669047.1|	-	0.00011	21.4	0.1	0.0012	17.9	0.0	2.0	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_22	PF13401.1	gi|297527023|ref|YP_003669047.1|	-	0.002	18.2	1.5	0.15	12.2	1.0	2.6	1	1	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|297527023|ref|YP_003669047.1|	-	0.0091	15.5	0.1	0.018	14.5	0.1	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
DUF258	PF03193.11	gi|297527023|ref|YP_003669047.1|	-	0.011	14.9	0.0	0.019	14.1	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
Arch_ATPase	PF01637.13	gi|297527023|ref|YP_003669047.1|	-	0.022	14.4	0.1	0.039	13.6	0.0	1.5	1	0	0	1	1	1	0	Archaeal	ATPase
AAA_16	PF13191.1	gi|297527023|ref|YP_003669047.1|	-	0.031	14.2	0.3	0.072	13.0	0.1	1.6	2	0	0	2	2	2	0	AAA	ATPase	domain
AAA_10	PF12846.2	gi|297527023|ref|YP_003669047.1|	-	0.045	13.1	0.1	0.084	12.2	0.1	1.4	1	0	0	1	1	1	0	AAA-like	domain
AAA_33	PF13671.1	gi|297527023|ref|YP_003669047.1|	-	0.05	13.4	0.5	0.22	11.3	0.1	2.0	2	0	0	2	2	2	0	AAA	domain
AAA_25	PF13481.1	gi|297527023|ref|YP_003669047.1|	-	0.083	12.2	1.1	1.4	8.2	0.0	2.4	2	1	0	2	2	2	0	AAA	domain
AAA_23	PF13476.1	gi|297527023|ref|YP_003669047.1|	-	0.084	13.1	0.1	0.2	11.9	0.1	1.6	1	0	0	1	1	1	0	AAA	domain
DEAD	PF00270.24	gi|297527023|ref|YP_003669047.1|	-	0.1	12.1	0.0	0.14	11.6	0.0	1.4	1	1	0	1	1	1	0	DEAD/DEAH	box	helicase
AAA_19	PF13245.1	gi|297527023|ref|YP_003669047.1|	-	0.12	12.1	0.1	0.42	10.3	0.0	1.9	2	0	0	2	2	2	0	Part	of	AAA	domain
AAA	PF00004.24	gi|297527023|ref|YP_003669047.1|	-	0.13	12.5	1.6	3.8	7.7	0.0	2.4	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
NACHT	PF05729.7	gi|297527023|ref|YP_003669047.1|	-	0.15	11.6	0.0	0.26	10.9	0.0	1.3	1	0	0	1	1	1	0	NACHT	domain
MMR_HSR1	PF01926.18	gi|297527023|ref|YP_003669047.1|	-	0.25	11.3	1.3	0.84	9.6	0.9	2.1	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
AAA_17	PF13207.1	gi|297527023|ref|YP_003669047.1|	-	0.45	11.3	3.1	2.3	9.0	2.0	2.4	1	1	0	1	1	1	0	AAA	domain
Asp	PF00026.18	gi|297527024|ref|YP_003669048.1|	-	0.07	12.3	0.2	0.38	9.9	0.0	1.8	1	1	1	2	2	2	0	Eukaryotic	aspartyl	protease
Glyco_hydro_57	PF03065.10	gi|297527025|ref|YP_003669049.1|	-	2.6e-34	118.7	12.9	3.3e-33	115.0	5.0	2.3	1	1	1	2	2	2	2	Glycosyl	hydrolase	family	57
Transglut_C	PF00927.17	gi|297527025|ref|YP_003669049.1|	-	0.00027	20.9	0.4	0.00059	19.8	0.3	1.5	1	0	0	1	1	1	1	Transglutaminase	family,	C-terminal	ig	like	domain
BACON	PF13004.2	gi|297527025|ref|YP_003669049.1|	-	0.0066	16.6	0.4	0.055	13.6	0.2	2.8	1	0	0	1	1	1	1	Bacteroidetes-Associated	Carbohydrate-binding	Often	N-terminal
CARDB	PF07705.6	gi|297527025|ref|YP_003669049.1|	-	0.029	14.4	4.9	0.088	12.8	1.4	2.8	2	0	0	2	2	2	0	CARDB
OPT	PF03169.10	gi|297527026|ref|YP_003669050.1|	-	1.9e-14	53.0	47.5	1.3e-09	37.1	11.7	3.6	2	2	0	2	2	2	2	OPT	oligopeptide	transporter	protein
Peptidase_M50	PF02163.17	gi|297527027|ref|YP_003669051.1|	-	2.8	6.8	7.8	56	2.6	0.0	3.5	2	1	0	2	2	2	0	Peptidase	family	M50
FtsX	PF02687.16	gi|297527028|ref|YP_003669052.1|	-	1.4e-14	53.8	12.5	1.4e-14	53.8	8.7	4.1	4	0	0	4	4	4	1	FtsX-like	permease	family
MacB_PCD	PF12704.2	gi|297527028|ref|YP_003669052.1|	-	1e-10	41.6	1.6	1e-10	41.6	1.1	2.4	2	1	0	2	2	2	1	MacB-like	periplasmic	core	domain
Peptidase_M28	PF04389.12	gi|297527028|ref|YP_003669052.1|	-	1.3e-05	25.0	0.0	3.9e-05	23.4	0.0	1.8	2	0	0	2	2	2	1	Peptidase	family	M28
YidC_periplas	PF14849.1	gi|297527029|ref|YP_003669053.1|	-	6.9e-11	42.5	0.5	1.8e-09	37.8	0.4	2.5	1	1	0	1	1	1	1	YidC	periplasmic	domain
PqqD	PF05402.7	gi|297527032|ref|YP_003669056.1|	-	8.3e-13	48.1	0.0	1.1e-12	47.8	0.0	1.3	1	0	0	1	1	1	1	Coenzyme	PQQ	synthesis	protein	D	(PqqD)
HTH_36	PF13730.1	gi|297527032|ref|YP_003669056.1|	-	0.031	14.3	0.1	0.15	12.2	0.0	1.9	2	0	0	2	2	2	0	Helix-turn-helix	domain
DUF3283	PF11686.3	gi|297527032|ref|YP_003669056.1|	-	0.043	13.6	0.0	0.074	12.8	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3283)
TrmB	PF01978.14	gi|297527032|ref|YP_003669056.1|	-	0.15	11.8	0.5	1.7	8.4	0.1	2.3	2	1	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
Glyco_transf_5	PF08323.6	gi|297527033|ref|YP_003669057.1|	-	4.8e-32	111.3	0.3	1.4e-31	109.9	0.0	1.8	2	0	0	2	2	2	1	Starch	synthase	catalytic	domain
Glycos_transf_1	PF00534.15	gi|297527033|ref|YP_003669057.1|	-	9.1e-28	96.8	0.1	8.9e-26	90.3	0.0	2.4	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|297527033|ref|YP_003669057.1|	-	4.5e-10	39.8	0.0	9.5e-10	38.7	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_2	PF13524.1	gi|297527033|ref|YP_003669057.1|	-	0.00053	20.1	0.0	0.094	12.9	0.0	2.5	2	0	0	2	2	2	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|297527033|ref|YP_003669057.1|	-	0.017	14.8	0.0	0.19	11.4	0.0	2.5	3	0	0	3	3	3	0	Glycosyltransferase	Family	4
Glyco_trans_4_4	PF13579.1	gi|297527033|ref|YP_003669057.1|	-	0.2	11.8	0.1	5.2	7.1	0.0	2.9	2	2	0	2	2	2	0	Glycosyl	transferase	4-like	domain
DUF1926	PF09095.6	gi|297527034|ref|YP_003669058.1|	-	2.2e-63	214.0	0.9	1.7e-61	207.8	0.6	2.2	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF1926)
Glyco_hydro_57	PF03065.10	gi|297527034|ref|YP_003669058.1|	-	4e-41	141.1	1.9	3e-40	138.2	1.3	2.1	1	1	0	1	1	1	1	Glycosyl	hydrolase	family	57
DUF1925	PF09094.6	gi|297527034|ref|YP_003669058.1|	-	7.6e-34	115.5	3.3	1.5e-33	114.6	2.3	1.5	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1925)
Glyco_hydro_38	PF01074.17	gi|297527034|ref|YP_003669058.1|	-	4.6e-06	26.1	0.0	7.7e-06	25.3	0.0	1.4	1	0	0	1	1	1	1	Glycosyl	hydrolases	family	38	N-terminal	domain
Glyco_hydro_1	PF00232.13	gi|297527036|ref|YP_003669060.1|	-	1.4e-88	297.0	12.5	2.7e-87	292.8	8.7	2.0	1	1	0	1	1	1	1	Glycosyl	hydrolase	family	1
Cellulase	PF00150.13	gi|297527036|ref|YP_003669060.1|	-	4.4e-06	26.0	1.2	4.4e-06	26.0	0.9	1.8	2	0	0	2	2	2	1	Cellulase	(glycosyl	hydrolase	family	5)
Glyco_hydro_cc	PF11790.3	gi|297527036|ref|YP_003669060.1|	-	0.0033	16.8	1.6	0.0065	15.9	0.0	2.0	2	0	0	2	2	2	1	Glycosyl	hydrolase	catalytic	core
Radical_SAM	PF04055.16	gi|297527036|ref|YP_003669060.1|	-	0.06	13.5	0.1	0.38	10.9	0.0	2.3	2	1	0	2	2	2	0	Radical	SAM	superfamily
MFS_1	PF07690.11	gi|297527037|ref|YP_003669061.1|	-	1.5e-51	175.1	34.3	4.1e-43	147.4	20.3	2.0	1	1	1	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|297527037|ref|YP_003669061.1|	-	5e-11	41.8	24.9	6.7e-10	38.1	17.7	2.4	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
ATG22	PF11700.3	gi|297527037|ref|YP_003669061.1|	-	3e-07	29.3	32.6	0.00023	19.8	8.7	2.9	1	1	1	2	2	2	2	Vacuole	effluxer	Atg22	like
MFS_2	PF13347.1	gi|297527037|ref|YP_003669061.1|	-	4e-05	22.2	30.1	0.0019	16.6	7.7	2.8	2	1	1	3	3	3	2	MFS/sugar	transport	protein
MFS_1_like	PF12832.2	gi|297527037|ref|YP_003669061.1|	-	0.0057	16.4	1.0	0.0057	16.4	0.7	3.0	5	0	0	5	5	5	1	MFS_1	like	family
MFS_3	PF05977.8	gi|297527037|ref|YP_003669061.1|	-	0.038	12.1	12.3	0.085	10.9	1.9	2.3	1	1	1	2	2	2	0	Transmembrane	secretion	effector
OATP	PF03137.15	gi|297527037|ref|YP_003669061.1|	-	0.29	9.1	18.7	0.12	10.4	1.2	3.9	3	1	1	4	4	4	0	Organic	Anion	Transporter	Polypeptide	(OATP)	family
Glyco_hydro_57	PF03065.10	gi|297527038|ref|YP_003669062.1|	-	1.4e-70	237.9	0.9	5.1e-70	236.1	0.6	1.8	1	1	0	1	1	1	1	Glycosyl	hydrolase	family	57
HTH_45	PF14947.1	gi|297527040|ref|YP_003669064.1|	-	1.3e-10	40.9	2.2	1.3e-10	40.9	1.5	1.8	2	0	0	2	2	1	1	Winged	helix-turn-helix
HTH_24	PF13412.1	gi|297527040|ref|YP_003669064.1|	-	2.9e-06	26.5	1.0	5.6e-06	25.6	0.1	1.9	2	0	0	2	2	2	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.14	gi|297527040|ref|YP_003669064.1|	-	3.3e-06	26.6	0.2	7.6e-06	25.5	0.1	1.7	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_IclR	PF09339.5	gi|297527040|ref|YP_003669064.1|	-	4.6e-06	26.1	0.0	9.9e-06	25.0	0.0	1.5	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
DUF2250	PF10007.4	gi|297527040|ref|YP_003669064.1|	-	4.7e-06	26.4	1.0	1e-05	25.3	0.7	1.5	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
MarR	PF01047.17	gi|297527040|ref|YP_003669064.1|	-	1.2e-05	24.8	0.0	2.5e-05	23.8	0.0	1.5	1	0	0	1	1	1	1	MarR	family
DUF4423	PF14394.1	gi|297527040|ref|YP_003669064.1|	-	1.7e-05	24.4	0.3	2.6e-05	23.8	0.2	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF4423)
HTH_20	PF12840.2	gi|297527040|ref|YP_003669064.1|	-	4e-05	23.3	0.0	7e-05	22.5	0.0	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_36	PF13730.1	gi|297527040|ref|YP_003669064.1|	-	5.2e-05	23.2	0.1	0.00082	19.4	0.0	2.3	2	0	0	2	2	2	1	Helix-turn-helix	domain
FaeA	PF04703.7	gi|297527040|ref|YP_003669064.1|	-	7.3e-05	22.8	0.1	0.00015	21.8	0.1	1.5	1	0	0	1	1	1	1	FaeA-like	protein
Phage_rep_org_N	PF09681.5	gi|297527040|ref|YP_003669064.1|	-	0.00028	20.4	0.0	0.00056	19.4	0.0	1.4	1	0	0	1	1	1	1	N-terminal	phage	replisome	organiser	(Phage_rep_org_N)
HTH_11	PF08279.7	gi|297527040|ref|YP_003669064.1|	-	0.00035	20.1	0.6	0.0014	18.2	0.1	2.2	2	0	0	2	2	2	1	HTH	domain
HTH_12	PF08461.5	gi|297527040|ref|YP_003669064.1|	-	0.00045	19.8	0.3	0.001	18.7	0.2	1.6	1	0	0	1	1	1	1	Ribonuclease	R	winged-helix	domain
FeoC	PF09012.5	gi|297527040|ref|YP_003669064.1|	-	0.00051	19.6	0.0	0.0021	17.6	0.0	1.9	2	0	0	2	2	2	1	FeoC	like	transcriptional	regulator
GntR	PF00392.16	gi|297527040|ref|YP_003669064.1|	-	0.00062	19.1	0.2	0.0018	17.6	0.0	1.8	2	0	0	2	2	1	1	Bacterial	regulatory	proteins,	gntR	family
LexA_DNA_bind	PF01726.11	gi|297527040|ref|YP_003669064.1|	-	0.00084	18.8	0.1	0.003	17.0	0.1	1.8	2	0	0	2	2	1	1	LexA	DNA	binding	domain
HTH_27	PF13463.1	gi|297527040|ref|YP_003669064.1|	-	0.0016	18.7	0.1	0.0057	16.9	0.0	2.0	3	0	0	3	3	1	1	Winged	helix	DNA-binding	domain
HTH_5	PF01022.15	gi|297527040|ref|YP_003669064.1|	-	0.0021	17.6	0.0	0.0045	16.6	0.0	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_23	PF13384.1	gi|297527040|ref|YP_003669064.1|	-	0.0023	17.4	0.0	0.0049	16.4	0.0	1.6	1	0	0	1	1	1	1	Homeodomain-like	domain
Rrf2	PF02082.15	gi|297527040|ref|YP_003669064.1|	-	0.003	17.6	0.0	0.0065	16.5	0.0	1.6	1	0	0	1	1	1	1	Transcriptional	regulator
MarR_2	PF12802.2	gi|297527040|ref|YP_003669064.1|	-	0.0041	16.7	0.0	0.0098	15.5	0.0	1.6	2	0	0	2	2	1	1	MarR	family
HemN_C	PF06969.11	gi|297527040|ref|YP_003669064.1|	-	0.0047	16.9	0.3	0.012	15.7	0.1	1.8	2	0	0	2	2	1	1	HemN	C-terminal	domain
Ribosomal_S19e	PF01090.14	gi|297527040|ref|YP_003669064.1|	-	0.0048	16.3	0.1	0.0068	15.8	0.1	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S19e
TFIIE_alpha	PF02002.12	gi|297527040|ref|YP_003669064.1|	-	0.006	16.0	1.0	0.0078	15.6	0.1	1.7	2	0	0	2	2	1	1	TFIIE	alpha	subunit
HTH_40	PF14493.1	gi|297527040|ref|YP_003669064.1|	-	0.0069	16.5	0.1	0.053	13.7	0.0	2.1	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_29	PF13551.1	gi|297527040|ref|YP_003669064.1|	-	0.0071	16.4	0.0	0.014	15.5	0.0	1.6	1	0	0	1	1	1	1	Winged	helix-turn	helix
Fe_dep_repress	PF01325.14	gi|297527040|ref|YP_003669064.1|	-	0.0084	16.0	0.1	0.025	14.5	0.0	1.8	2	0	0	2	2	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_Crp_2	PF13545.1	gi|297527040|ref|YP_003669064.1|	-	0.0086	15.8	0.1	0.025	14.3	0.0	1.8	2	0	0	2	2	1	1	Crp-like	helix-turn-helix	domain
Mrr_N	PF14338.1	gi|297527040|ref|YP_003669064.1|	-	0.0088	16.1	0.2	0.076	13.1	0.1	2.2	2	0	0	2	2	2	1	Mrr	N-terminal	domain
HTH_28	PF13518.1	gi|297527040|ref|YP_003669064.1|	-	0.019	14.9	0.2	0.059	13.3	0.1	1.9	2	0	0	2	2	2	0	Helix-turn-helix	domain
HTH_DeoR	PF08220.7	gi|297527040|ref|YP_003669064.1|	-	0.024	14.1	0.1	0.068	12.7	0.0	1.8	2	0	0	2	2	2	0	DeoR-like	helix-turn-helix	domain
MerR-DNA-bind	PF09278.6	gi|297527040|ref|YP_003669064.1|	-	0.025	14.9	0.3	0.061	13.7	0.2	1.6	1	0	0	1	1	1	0	MerR,	DNA	binding
HxlR	PF01638.12	gi|297527040|ref|YP_003669064.1|	-	0.026	14.1	0.6	0.071	12.7	0.4	1.8	1	1	0	1	1	1	0	HxlR-like	helix-turn-helix
Sigma70_r4_2	PF08281.7	gi|297527040|ref|YP_003669064.1|	-	0.057	12.8	0.0	0.13	11.7	0.0	1.5	1	0	0	1	1	1	0	Sigma-70,	region	4
rRNA_processing	PF08524.6	gi|297527040|ref|YP_003669064.1|	-	0.062	13.0	1.3	0.097	12.4	0.9	1.3	1	0	0	1	1	1	0	rRNA	processing
RNA_pol_Rpc34	PF05158.7	gi|297527040|ref|YP_003669064.1|	-	0.097	11.8	0.1	0.15	11.2	0.1	1.2	1	0	0	1	1	1	0	RNA	polymerase	Rpc34	subunit
RPA_C	PF08784.6	gi|297527040|ref|YP_003669064.1|	-	0.11	12.9	0.5	0.36	11.2	0.0	1.9	2	0	0	2	2	2	0	Replication	protein	A	C	terminal
HTH_Mga	PF08280.6	gi|297527040|ref|YP_003669064.1|	-	0.12	12.1	1.7	0.2	11.4	0.0	2.2	3	0	0	3	3	2	0	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
ABC2_membrane_3	PF12698.2	gi|297527041|ref|YP_003669065.1|	-	1.7e-23	83.2	27.6	2e-23	83.0	19.1	1.0	1	0	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_2	PF12679.2	gi|297527041|ref|YP_003669065.1|	-	1.2e-17	63.6	14.4	2.6e-17	62.5	10.0	1.6	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC2_membrane_4	PF12730.2	gi|297527041|ref|YP_003669065.1|	-	1.2e-05	24.5	34.7	3.1e-05	23.2	24.1	1.7	1	1	0	1	1	1	1	ABC-2	family	transporter	protein
ABC_tran	PF00005.22	gi|297527042|ref|YP_003669066.1|	-	1.5e-30	106.3	0.0	2.5e-30	105.5	0.0	1.4	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297527042|ref|YP_003669066.1|	-	3.7e-15	56.6	0.1	6.3e-07	29.6	0.0	2.1	1	1	0	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|297527042|ref|YP_003669066.1|	-	6.3e-06	25.5	0.1	0.028	13.6	0.0	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_23	PF13476.1	gi|297527042|ref|YP_003669066.1|	-	9.6e-05	22.7	0.1	0.00012	22.4	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|297527042|ref|YP_003669066.1|	-	0.0011	18.4	0.0	0.0019	17.6	0.0	1.3	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_15	PF13175.1	gi|297527042|ref|YP_003669066.1|	-	0.0028	16.7	0.1	0.51	9.3	0.1	2.1	1	1	0	2	2	2	2	AAA	ATPase	domain
AAA_19	PF13245.1	gi|297527042|ref|YP_003669066.1|	-	0.009	15.7	0.2	0.022	14.5	0.1	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
SRP54	PF00448.17	gi|297527042|ref|YP_003669066.1|	-	0.016	14.6	0.1	0.041	13.3	0.0	1.6	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
MutS_V	PF00488.16	gi|297527042|ref|YP_003669066.1|	-	0.022	14.1	0.0	4.8	6.5	0.0	2.1	2	0	0	2	2	2	0	MutS	domain	V
AAA	PF00004.24	gi|297527042|ref|YP_003669066.1|	-	0.026	14.7	0.2	0.051	13.7	0.1	1.6	2	0	0	2	2	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
UPF0079	PF02367.12	gi|297527042|ref|YP_003669066.1|	-	0.041	13.5	0.1	0.083	12.5	0.1	1.5	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
AAA_13	PF13166.1	gi|297527042|ref|YP_003669066.1|	-	0.064	11.7	0.1	1.6	7.0	0.1	2.0	2	0	0	2	2	2	0	AAA	domain
AAA_30	PF13604.1	gi|297527042|ref|YP_003669066.1|	-	0.075	12.6	0.0	0.13	11.8	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
MobB	PF03205.9	gi|297527042|ref|YP_003669066.1|	-	0.12	12.0	0.1	0.24	11.1	0.0	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
FSA_C	PF10479.4	gi|297527043|ref|YP_003669067.1|	-	0.0012	17.0	0.0	0.0015	16.6	0.0	1.1	1	0	0	1	1	1	1	Fragile	site-associated	protein	C-terminus
Aldolase_2	PF10120.4	gi|297527044|ref|YP_003669068.1|	-	1.8e-39	134.8	0.0	2.7e-39	134.2	0.0	1.3	1	0	0	1	1	1	1	Putative	aldolase
HTH_23	PF13384.1	gi|297527044|ref|YP_003669068.1|	-	0.0001	21.7	0.0	0.00052	19.5	0.0	2.1	2	0	0	2	2	2	1	Homeodomain-like	domain
HTH_37	PF13744.1	gi|297527044|ref|YP_003669068.1|	-	0.00062	19.5	0.1	0.0017	18.0	0.0	1.7	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_24	PF13412.1	gi|297527044|ref|YP_003669068.1|	-	0.001	18.4	0.1	0.012	15.0	0.0	2.6	3	0	0	3	3	3	1	Winged	helix-turn-helix	DNA-binding
HTH_38	PF13936.1	gi|297527044|ref|YP_003669068.1|	-	0.0068	15.9	1.3	0.013	15.0	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|297527044|ref|YP_003669068.1|	-	0.012	15.0	0.0	0.088	12.2	0.0	2.5	3	0	0	3	3	3	0	Sigma-70,	region	4
HTH_3	PF01381.17	gi|297527044|ref|YP_003669068.1|	-	0.015	15.1	0.0	0.057	13.2	0.0	2.1	2	0	0	2	2	2	0	Helix-turn-helix
HTH_28	PF13518.1	gi|297527044|ref|YP_003669068.1|	-	0.061	13.3	0.0	0.14	12.1	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
CPSase_L_D3	PF02787.14	gi|297527044|ref|YP_003669068.1|	-	0.07	12.8	0.0	0.22	11.2	0.0	1.8	1	1	1	2	2	2	0	Carbamoyl-phosphate	synthetase	large	chain,	oligomerisation	domain
HTH_8	PF02954.14	gi|297527044|ref|YP_003669068.1|	-	0.071	12.6	0.0	0.16	11.5	0.0	1.6	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	Fis	family
ApbA_C	PF08546.6	gi|297527045|ref|YP_003669069.1|	-	1e-26	93.3	0.1	1.8e-26	92.5	0.0	1.4	1	0	0	1	1	1	1	Ketopantoate	reductase	PanE/ApbA	C	terminal
ApbA	PF02558.11	gi|297527045|ref|YP_003669069.1|	-	2.3e-21	75.7	0.1	6e-21	74.4	0.0	1.7	2	0	0	2	2	2	1	Ketopantoate	reductase	PanE/ApbA
F420_oxidored	PF03807.12	gi|297527045|ref|YP_003669069.1|	-	0.00098	19.5	0.0	0.0025	18.1	0.0	1.8	1	0	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_Gly3P_dh_N	PF01210.18	gi|297527045|ref|YP_003669069.1|	-	0.0034	17.1	0.1	0.11	12.2	0.0	2.4	2	1	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
DAO	PF01266.19	gi|297527045|ref|YP_003669069.1|	-	0.11	11.3	1.9	5.2	5.8	0.6	2.1	2	0	0	2	2	2	0	FAD	dependent	oxidoreductase
Pantoate_transf	PF02548.10	gi|297527046|ref|YP_003669070.1|	-	4.5e-112	373.4	0.4	5.1e-112	373.2	0.3	1.0	1	0	0	1	1	1	1	Ketopantoate	hydroxymethyltransferase
PEP_mutase	PF13714.1	gi|297527046|ref|YP_003669070.1|	-	6e-09	35.4	3.3	3.3e-07	29.7	2.3	2.9	1	1	0	1	1	1	1	Phosphoenolpyruvate	phosphomutase
GHMP_kinases_N	PF00288.21	gi|297527047|ref|YP_003669071.1|	-	0.027	14.5	0.1	0.045	13.8	0.1	1.4	1	0	0	1	1	1	0	GHMP	kinases	N	terminal	domain
DUF137	PF02006.11	gi|297527048|ref|YP_003669072.1|	-	1.5e-78	262.2	2.1	1.9e-78	261.9	1.5	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF137
DFP	PF04127.10	gi|297527049|ref|YP_003669073.1|	-	9.9e-52	175.2	0.0	3.3e-51	173.5	0.0	1.7	2	0	0	2	2	2	1	DNA	/	pantothenate	metabolism	flavoprotein
Flavoprotein	PF02441.14	gi|297527049|ref|YP_003669073.1|	-	3.9e-28	97.7	0.6	1.5e-27	95.8	0.1	2.0	2	0	0	2	2	2	1	Flavoprotein
Acetyltransf_1	PF00583.19	gi|297527050|ref|YP_003669074.1|	-	1e-19	70.3	0.1	1.9e-19	69.4	0.1	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	family
Acetyltransf_7	PF13508.1	gi|297527050|ref|YP_003669074.1|	-	1.5e-11	44.2	0.2	2.9e-11	43.3	0.1	1.4	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|297527050|ref|YP_003669074.1|	-	2e-11	43.4	0.0	3.1e-11	42.8	0.0	1.3	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_4	PF13420.1	gi|297527050|ref|YP_003669074.1|	-	1.6e-09	37.8	1.6	3.3e-08	33.6	1.1	2.5	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_10	PF13673.1	gi|297527050|ref|YP_003669074.1|	-	1.1e-08	35.1	0.0	2.5e-08	34.0	0.0	1.7	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_3	PF13302.1	gi|297527050|ref|YP_003669074.1|	-	3.2e-08	33.8	0.0	4.8e-08	33.2	0.0	1.2	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.1	gi|297527050|ref|YP_003669074.1|	-	8.7e-08	32.1	0.0	1.7e-07	31.2	0.0	1.7	1	1	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|297527050|ref|YP_003669074.1|	-	2.6e-07	30.5	0.1	1.4e-06	28.1	0.0	2.3	2	1	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Meiosis_expr	PF15163.1	gi|297527050|ref|YP_003669074.1|	-	0.087	13.1	1.4	3	8.2	0.1	2.6	1	1	1	2	2	2	0	Meiosis-expressed
tRNA-synt_2	PF00152.15	gi|297527051|ref|YP_003669075.1|	-	3.2e-86	289.1	0.0	4.7e-86	288.5	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	II	(D,	K	and	N)
tRNA_anti-codon	PF01336.20	gi|297527051|ref|YP_003669075.1|	-	2.7e-09	36.7	1.8	4.8e-09	35.9	1.3	1.5	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
tRNA-synt_2d	PF01409.15	gi|297527051|ref|YP_003669075.1|	-	0.0025	17.0	0.1	0.048	12.8	0.0	2.2	2	0	0	2	2	2	1	tRNA	synthetases	class	II	core	domain	(F)
HhH-GPD	PF00730.20	gi|297527052|ref|YP_003669076.1|	-	9.8e-23	80.5	0.0	1.3e-22	80.0	0.0	1.2	1	0	0	1	1	1	1	HhH-GPD	superfamily	base	excision	DNA	repair	protein
EndIII_4Fe-2S	PF10576.4	gi|297527052|ref|YP_003669076.1|	-	5e-05	23.3	7.3	8.8e-05	22.5	5.1	1.4	1	0	0	1	1	1	1	Iron-sulfur	binding	domain	of	endonuclease	III
HHH	PF00633.18	gi|297527052|ref|YP_003669076.1|	-	0.00091	18.8	0.0	0.0031	17.1	0.0	2.0	1	0	0	1	1	1	1	Helix-hairpin-helix	motif
MNE1	PF13762.1	gi|297527052|ref|YP_003669076.1|	-	0.025	14.6	0.0	0.037	14.0	0.0	1.3	1	0	0	1	1	1	0	Mitochondrial	splicing	apparatus	component
DUF4473	PF14747.1	gi|297527052|ref|YP_003669076.1|	-	0.039	14.1	0.5	1.9	8.7	0.0	2.8	2	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4473)
Oxidored_molyb	PF00174.14	gi|297527053|ref|YP_003669077.1|	-	2e-42	144.5	0.1	2.7e-42	144.0	0.1	1.1	1	0	0	1	1	1	1	Oxidoreductase	molybdopterin	binding	domain
MFS_1	PF07690.11	gi|297527054|ref|YP_003669078.1|	-	4.7e-19	68.3	37.3	4.7e-19	68.3	25.8	1.4	2	0	0	2	2	2	1	Major	Facilitator	Superfamily
MFS_1_like	PF12832.2	gi|297527054|ref|YP_003669078.1|	-	1.8	8.3	20.0	0.4	10.5	0.3	4.6	3	2	2	5	5	5	0	MFS_1	like	family
Met_10	PF02475.11	gi|297527055|ref|YP_003669079.1|	-	3.1e-60	203.2	0.0	4.1e-60	202.8	0.0	1.1	1	0	0	1	1	1	1	Met-10+	like-protein
TRM	PF02005.11	gi|297527055|ref|YP_003669079.1|	-	2.9e-06	26.4	0.0	3.8e-06	26.0	0.0	1.1	1	0	0	1	1	1	1	N2,N2-dimethylguanosine	tRNA	methyltransferase
Methyltransf_26	PF13659.1	gi|297527055|ref|YP_003669079.1|	-	8.8e-06	25.7	0.0	1.2e-05	25.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|297527055|ref|YP_003669079.1|	-	1.6e-05	24.5	0.0	2.3e-05	23.9	0.0	1.2	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
PrmA	PF06325.8	gi|297527055|ref|YP_003669079.1|	-	1.7e-05	24.0	0.0	2.3e-05	23.7	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
MTS	PF05175.9	gi|297527055|ref|YP_003669079.1|	-	0.00013	21.3	0.0	0.00021	20.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_18	PF12847.2	gi|297527055|ref|YP_003669079.1|	-	0.0022	18.5	0.0	0.0052	17.3	0.0	1.6	1	1	1	2	2	2	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|297527055|ref|YP_003669079.1|	-	0.0022	17.6	0.0	0.0033	17.0	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_16	PF10294.4	gi|297527055|ref|YP_003669079.1|	-	0.0023	17.3	0.0	0.0033	16.8	0.0	1.2	1	0	0	1	1	1	1	Putative	methyltransferase
MethyltransfD12	PF02086.10	gi|297527055|ref|YP_003669079.1|	-	0.027	13.9	0.0	0.049	13.0	0.0	1.5	1	1	0	1	1	1	0	D12	class	N6	adenine-specific	DNA	methyltransferase
PhoH	PF02562.11	gi|297527056|ref|YP_003669080.1|	-	6.9e-47	159.3	0.0	1.1e-46	158.6	0.0	1.3	1	0	0	1	1	1	1	PhoH-like	protein
KH_5	PF13184.1	gi|297527056|ref|YP_003669080.1|	-	4e-08	32.9	0.0	3.4e-07	29.9	0.0	2.2	2	0	0	2	2	2	1	NusA-like	KH	domain
KH_2	PF07650.12	gi|297527056|ref|YP_003669080.1|	-	2.7e-07	30.0	0.1	1.8e-06	27.4	0.2	2.1	2	0	0	2	2	2	1	KH	domain
KH_1	PF00013.24	gi|297527056|ref|YP_003669080.1|	-	1.5e-06	27.7	0.2	3.9e-06	26.4	0.1	1.7	1	0	0	1	1	1	1	KH	domain
KH_3	PF13014.1	gi|297527056|ref|YP_003669080.1|	-	4.1e-05	23.1	0.3	9.4e-05	21.9	0.2	1.6	1	0	0	1	1	1	1	KH	domain
KH_4	PF13083.1	gi|297527056|ref|YP_003669080.1|	-	0.0058	16.2	0.3	0.021	14.4	0.1	2.1	2	0	0	2	2	2	1	KH	domain
AAA_30	PF13604.1	gi|297527056|ref|YP_003669080.1|	-	0.014	15.0	0.0	0.64	9.5	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
IstB_IS21	PF01695.12	gi|297527056|ref|YP_003669080.1|	-	0.088	12.2	0.0	0.14	11.5	0.0	1.3	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
DUF2007	PF09413.5	gi|297527057|ref|YP_003669081.1|	-	0.0078	16.0	1.4	0.79	9.5	0.1	2.3	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF2007)
IF2_N	PF04760.10	gi|297527057|ref|YP_003669081.1|	-	0.055	13.1	0.8	12	5.6	0.0	2.9	3	0	0	3	3	3	0	Translation	initiation	factor	IF-2,	N-terminal	region
FtsH_ext	PF06480.10	gi|297527057|ref|YP_003669081.1|	-	0.1	12.8	0.0	0.14	12.3	0.0	1.4	1	0	0	1	1	1	0	FtsH	Extracellular
PCNA_N	PF00705.13	gi|297527058|ref|YP_003669082.1|	-	3e-11	42.9	0.1	6.9e-11	41.7	0.0	1.6	2	0	0	2	2	2	1	Proliferating	cell	nuclear	antigen,	N-terminal	domain
PCNA_C	PF02747.10	gi|297527058|ref|YP_003669082.1|	-	3e-06	27.1	1.1	1.3e-05	25.0	0.0	2.4	3	1	0	3	3	3	1	Proliferating	cell	nuclear	antigen,	C-terminal	domain
Rad9	PF04139.8	gi|297527058|ref|YP_003669082.1|	-	0.0054	15.8	0.0	0.014	14.5	0.0	1.9	1	1	0	1	1	1	1	Rad9
Rad1	PF02144.11	gi|297527058|ref|YP_003669082.1|	-	0.036	12.8	0.3	13	4.4	0.0	2.9	2	1	1	3	3	3	0	Repair	protein	Rad1/Rec1/Rad17
HTH_11	PF08279.7	gi|297527059|ref|YP_003669083.1|	-	5.7e-06	25.8	0.5	1.3e-05	24.7	0.4	1.6	1	0	0	1	1	1	1	HTH	domain
Mrr_cat	PF04471.7	gi|297527059|ref|YP_003669083.1|	-	8.3e-05	22.3	0.0	0.00015	21.5	0.0	1.4	1	0	0	1	1	1	1	Restriction	endonuclease
HTH_24	PF13412.1	gi|297527059|ref|YP_003669083.1|	-	0.0001	21.6	0.3	0.00017	20.9	0.2	1.4	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_Mga	PF08280.6	gi|297527059|ref|YP_003669083.1|	-	0.00043	19.9	0.5	0.00093	18.9	0.3	1.6	1	0	0	1	1	1	1	M	protein	trans-acting	positive	regulator	(MGA)	HTH	domain
MerR_1	PF13411.1	gi|297527059|ref|YP_003669083.1|	-	0.00045	19.9	0.1	3.8	7.3	0.0	3.3	3	0	0	3	3	3	2	MerR	HTH	family	regulatory	protein
TrmB	PF01978.14	gi|297527059|ref|YP_003669083.1|	-	0.0007	19.2	0.2	0.0012	18.4	0.2	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_23	PF13384.1	gi|297527059|ref|YP_003669083.1|	-	0.0018	17.8	0.0	0.047	13.3	0.0	2.4	2	0	0	2	2	2	1	Homeodomain-like	domain
HTH_8	PF02954.14	gi|297527059|ref|YP_003669083.1|	-	0.002	17.5	0.9	0.0045	16.5	0.1	1.9	2	0	0	2	2	2	1	Bacterial	regulatory	protein,	Fis	family
HTH_AsnC-type	PF13404.1	gi|297527059|ref|YP_003669083.1|	-	0.0043	16.5	0.0	0.007	15.8	0.0	1.4	1	0	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
HTH_28	PF13518.1	gi|297527059|ref|YP_003669083.1|	-	0.0054	16.7	0.0	0.024	14.6	0.0	2.0	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_36	PF13730.1	gi|297527059|ref|YP_003669083.1|	-	0.013	15.5	0.3	0.033	14.3	0.2	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_17	PF12728.2	gi|297527059|ref|YP_003669083.1|	-	0.013	15.6	0.2	0.2	11.9	0.0	2.8	3	0	0	3	3	3	0	Helix-turn-helix	domain
Mga	PF05043.8	gi|297527059|ref|YP_003669083.1|	-	0.016	15.5	2.5	0.019	15.2	0.1	2.2	3	0	0	3	3	2	0	Mga	helix-turn-helix	domain
HTH_Tnp_ISL3	PF13542.1	gi|297527059|ref|YP_003669083.1|	-	0.02	14.0	0.0	0.15	11.2	0.0	2.3	2	0	0	2	2	2	0	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_26	PF13443.1	gi|297527059|ref|YP_003669083.1|	-	0.056	13.6	0.0	0.17	12.1	0.0	1.8	1	0	0	1	1	1	0	Cro/C1-type	HTH	DNA-binding	domain
B-block_TFIIIC	PF04182.7	gi|297527059|ref|YP_003669083.1|	-	0.084	12.7	0.1	0.17	11.7	0.1	1.5	1	0	0	1	1	1	0	B-block	binding	subunit	of	TFIIIC
DS	PF01916.12	gi|297527060|ref|YP_003669084.1|	-	1.3e-79	267.4	0.0	1.6e-79	267.1	0.0	1.0	1	0	0	1	1	1	1	Deoxyhypusine	synthase
DUF1743	PF08489.6	gi|297527061|ref|YP_003669085.1|	-	9.4e-34	115.6	0.0	1.7e-33	114.8	0.0	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1743)
tRNA_anti-codon	PF01336.20	gi|297527061|ref|YP_003669085.1|	-	5.6e-07	29.3	0.3	1.2e-06	28.2	0.2	1.6	1	0	0	1	1	1	1	OB-fold	nucleic	acid	binding	domain
OrfB_Zn_ribbon	PF07282.6	gi|297527061|ref|YP_003669085.1|	-	0.00015	21.3	1.0	0.00033	20.2	0.7	1.5	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
zf-NADH-PPase	PF09297.6	gi|297527061|ref|YP_003669085.1|	-	0.00071	19.0	3.7	0.0012	18.3	2.6	1.3	1	0	0	1	1	1	1	NADH	pyrophosphatase	zinc	ribbon	domain
DUF1610	PF07754.6	gi|297527061|ref|YP_003669085.1|	-	0.0029	17.6	4.6	0.0067	16.5	3.2	1.6	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF1610)
DZR	PF12773.2	gi|297527061|ref|YP_003669085.1|	-	0.0049	16.6	0.5	0.0081	15.9	0.3	1.3	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|297527061|ref|YP_003669085.1|	-	0.03	13.5	3.7	2.3	7.5	0.5	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
IBR	PF01485.16	gi|297527061|ref|YP_003669085.1|	-	0.054	13.3	0.3	0.1	12.5	0.2	1.3	1	0	0	1	1	1	0	IBR	domain
Zn_Tnp_IS1595	PF12760.2	gi|297527061|ref|YP_003669085.1|	-	0.087	12.6	5.6	0.51	10.1	3.9	2.2	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|297527061|ref|YP_003669085.1|	-	0.22	11.0	4.4	6.2	6.4	0.0	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-HIT	PF04438.11	gi|297527061|ref|YP_003669085.1|	-	3.1	7.5	7.2	3.4	7.4	1.2	2.2	2	0	0	2	2	2	0	HIT	zinc	finger
zf-ISL3	PF14690.1	gi|297527061|ref|YP_003669085.1|	-	4.5	7.3	7.7	14	5.7	0.6	2.8	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
DUF457	PF04307.9	gi|297527062|ref|YP_003669086.1|	-	1e-18	67.1	11.2	1.5e-18	66.6	7.8	1.2	1	0	0	1	1	1	1	Predicted	membrane-bound	metal-dependent	hydrolase	(DUF457)
Zn_dep_PLPC	PF00882.13	gi|297527062|ref|YP_003669086.1|	-	0.064	12.9	0.2	0.099	12.2	0.1	1.3	1	0	0	1	1	1	0	Zinc	dependent	phospholipase	C
DUF1212	PF06738.7	gi|297527062|ref|YP_003669086.1|	-	0.5	9.7	5.2	0.52	9.7	2.2	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1212)
DUF1129	PF06570.6	gi|297527062|ref|YP_003669086.1|	-	0.57	9.4	5.2	0.74	9.0	3.4	1.4	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1129)
Filament	PF00038.16	gi|297527063|ref|YP_003669087.1|	-	0.00078	19.0	0.7	0.0012	18.3	0.5	1.2	1	0	0	1	1	1	1	Intermediate	filament	protein
DUF603	PF04645.7	gi|297527063|ref|YP_003669087.1|	-	0.0056	16.6	1.7	0.014	15.3	1.2	1.6	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF603
Baculo_PEP_C	PF04513.7	gi|297527063|ref|YP_003669087.1|	-	0.01	15.6	5.5	0.01	15.6	3.8	2.2	3	0	0	3	3	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Snapin_Pallidin	PF14712.1	gi|297527063|ref|YP_003669087.1|	-	0.013	15.8	3.9	0.032	14.5	2.7	1.7	1	0	0	1	1	1	0	Snapin/Pallidin
TMF_DNA_bd	PF12329.3	gi|297527063|ref|YP_003669087.1|	-	0.013	15.3	7.4	0.028	14.2	5.1	1.5	1	0	0	1	1	1	0	TATA	element	modulatory	factor	1	DNA	binding
Myosin_tail_1	PF01576.14	gi|297527063|ref|YP_003669087.1|	-	0.024	12.4	3.6	0.033	11.9	2.5	1.0	1	0	0	1	1	1	0	Myosin	tail
Reo_sigmaC	PF04582.7	gi|297527063|ref|YP_003669087.1|	-	0.027	13.6	0.3	0.048	12.8	0.2	1.3	1	0	0	1	1	1	0	Reovirus	sigma	C	capsid	protein
TPR_MLP1_2	PF07926.7	gi|297527063|ref|YP_003669087.1|	-	0.04	13.6	3.0	0.067	12.9	2.1	1.3	1	0	0	1	1	1	0	TPR/MLP1/MLP2-like	protein
TMF_TATA_bd	PF12325.3	gi|297527063|ref|YP_003669087.1|	-	0.041	13.6	0.9	0.078	12.7	0.6	1.3	1	0	0	1	1	1	0	TATA	element	modulatory	factor	1	TATA	binding
DivIVA	PF05103.8	gi|297527063|ref|YP_003669087.1|	-	0.053	13.5	4.5	1.6	8.8	0.6	2.3	1	1	1	2	2	2	0	DivIVA	protein
FlxA	PF14282.1	gi|297527063|ref|YP_003669087.1|	-	0.091	12.7	5.9	0.17	11.8	4.1	1.4	1	0	0	1	1	1	0	FlxA-like	protein
Tropomyosin	PF00261.15	gi|297527063|ref|YP_003669087.1|	-	0.094	11.7	1.1	0.14	11.2	0.7	1.1	1	0	0	1	1	1	0	Tropomyosin
Phage_GP20	PF06810.6	gi|297527063|ref|YP_003669087.1|	-	0.1	12.0	3.4	0.19	11.1	2.3	1.4	1	0	0	1	1	1	0	Phage	minor	structural	protein	GP20
PspA_IM30	PF04012.7	gi|297527063|ref|YP_003669087.1|	-	0.1	11.9	0.4	0.16	11.3	0.3	1.1	1	0	0	1	1	1	0	PspA/IM30	family
CENP-F_leu_zip	PF10473.4	gi|297527063|ref|YP_003669087.1|	-	0.11	12.3	2.1	0.19	11.6	1.4	1.3	1	0	0	1	1	1	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
Tropomyosin_1	PF12718.2	gi|297527063|ref|YP_003669087.1|	-	0.12	12.2	1.5	0.21	11.4	1.0	1.3	1	0	0	1	1	1	0	Tropomyosin	like
Cob_adeno_trans	PF01923.13	gi|297527063|ref|YP_003669087.1|	-	0.16	11.7	0.4	0.3	10.8	0.3	1.3	1	0	0	1	1	1	0	Cobalamin	adenosyltransferase
TBPIP	PF07106.8	gi|297527063|ref|YP_003669087.1|	-	0.31	10.5	9.4	0.044	13.3	3.5	1.7	2	0	0	2	2	2	0	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
Kinesin-relat_1	PF12711.2	gi|297527063|ref|YP_003669087.1|	-	0.63	10.4	3.8	0.35	11.2	1.0	1.8	2	0	0	2	2	1	0	Kinesin	motor
Sec8_exocyst	PF04048.9	gi|297527063|ref|YP_003669087.1|	-	1.1	8.9	6.9	0.32	10.6	2.5	1.8	2	0	0	2	2	2	0	Sec8	exocyst	complex	component	specific	domain
Seryl_tRNA_N	PF02403.17	gi|297527063|ref|YP_003669087.1|	-	1.4	8.9	6.1	6	6.9	4.3	1.8	1	1	0	1	1	1	0	Seryl-tRNA	synthetase	N-terminal	domain
DivIC	PF04977.10	gi|297527063|ref|YP_003669087.1|	-	1.7	8.1	7.4	6.7	6.2	1.3	2.5	1	1	1	2	2	2	0	Septum	formation	initiator
DUF972	PF06156.8	gi|297527063|ref|YP_003669087.1|	-	4	7.8	8.0	0.43	10.9	2.4	1.6	2	0	0	2	2	1	0	Protein	of	unknown	function	(DUF972)
HR1	PF02185.11	gi|297527063|ref|YP_003669087.1|	-	5.9	6.7	9.2	4.9	6.9	2.1	2.4	1	1	1	2	2	2	0	Hr1	repeat
AAA_26	PF13500.1	gi|297527064|ref|YP_003669088.1|	-	0.00043	19.9	0.0	0.0011	18.5	0.0	1.6	2	0	0	2	2	2	1	AAA	domain
IF-2B	PF01008.12	gi|297527065|ref|YP_003669089.1|	-	1.1e-54	185.3	0.0	1.4e-54	184.9	0.0	1.0	1	0	0	1	1	1	1	Initiation	factor	2	subunit	family
DUF1722	PF08349.6	gi|297527065|ref|YP_003669089.1|	-	0.12	12.2	0.0	0.2	11.5	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1722)
IF-2B	PF01008.12	gi|297527066|ref|YP_003669090.1|	-	1.3e-89	299.9	0.9	1.5e-89	299.7	0.6	1.0	1	0	0	1	1	1	1	Initiation	factor	2	subunit	family
DUF59	PF01883.14	gi|297527068|ref|YP_003669092.1|	-	3.8e-14	52.4	0.1	7.3e-14	51.5	0.1	1.5	1	1	1	2	2	2	1	Domain	of	unknown	function	DUF59
DUF384	PF04064.8	gi|297527068|ref|YP_003669092.1|	-	0.024	14.2	0.0	0.059	12.9	0.0	1.6	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF384)
tRNA-synt_2b	PF00587.20	gi|297527069|ref|YP_003669093.1|	-	1.1e-35	122.7	0.0	2e-35	121.9	0.0	1.5	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
Seryl_tRNA_N	PF02403.17	gi|297527069|ref|YP_003669093.1|	-	3.5e-20	72.0	7.9	6e-20	71.2	5.5	1.3	1	0	0	1	1	1	1	Seryl-tRNA	synthetase	N-terminal	domain
Thioredoxin_3	PF13192.1	gi|297527070|ref|YP_003669094.1|	-	5.8e-05	22.8	0.0	9.5e-05	22.1	0.0	1.4	1	0	0	1	1	1	1	Thioredoxin	domain
PfkB	PF00294.19	gi|297527071|ref|YP_003669095.1|	-	2.3e-08	33.5	0.0	2.8e-08	33.2	0.0	1.2	1	0	0	1	1	1	1	pfkB	family	carbohydrate	kinase
Pox_polyA_pol_N	PF12630.2	gi|297527074|ref|YP_003669098.1|	-	0.13	12.3	1.2	0.14	12.2	0.8	1.1	1	0	0	1	1	1	0	Poxvirus	poly(A)	polymerase	N-terminal	domain
Lactamase_B_3	PF13483.1	gi|297527075|ref|YP_003669099.1|	-	1.3e-39	135.5	0.2	1.6e-39	135.2	0.1	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.2	gi|297527075|ref|YP_003669099.1|	-	4.6e-12	45.8	3.0	2.8e-07	30.2	0.0	2.1	1	1	1	2	2	2	2	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|297527075|ref|YP_003669099.1|	-	0.095	12.3	3.1	1.8	8.2	1.2	2.2	2	0	0	2	2	2	0	Metallo-beta-lactamase	superfamily
PmbA_TldD	PF01523.11	gi|297527076|ref|YP_003669100.1|	-	5.1e-71	239.3	0.0	3.7e-70	236.5	0.0	1.9	2	0	0	2	2	2	1	Putative	modulator	of	DNA	gyrase
PmbA_TldD	PF01523.11	gi|297527077|ref|YP_003669101.1|	-	1.8e-71	240.8	0.1	2.3e-71	240.4	0.0	1.1	1	0	0	1	1	1	1	Putative	modulator	of	DNA	gyrase
Glyco_tranf_2_3	PF13641.1	gi|297527078|ref|YP_003669102.1|	-	2.9e-27	95.9	0.0	3.9e-27	95.5	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Glyco_trans_2_3	PF13632.1	gi|297527078|ref|YP_003669102.1|	-	3.6e-20	72.4	5.9	3.6e-20	72.4	4.1	2.6	2	1	0	2	2	2	1	Glycosyl	transferase	family	group	2
Glycos_transf_2	PF00535.21	gi|297527078|ref|YP_003669102.1|	-	6.3e-17	61.7	0.1	1.2e-16	60.8	0.1	1.5	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Glyco_transf_21	PF13506.1	gi|297527078|ref|YP_003669102.1|	-	7.7e-10	38.3	0.1	1.2e-09	37.7	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	family	21
Glyco_tranf_2_2	PF10111.4	gi|297527078|ref|YP_003669102.1|	-	1.7e-06	27.3	0.0	2.3e-06	26.8	0.0	1.2	1	0	0	1	1	1	1	Glycosyltransferase	like	family	2
Bac_DnaA	PF00308.13	gi|297527078|ref|YP_003669102.1|	-	0.059	13.0	0.0	0.1	12.1	0.0	1.3	1	0	0	1	1	1	0	Bacterial	dnaA	protein
DEAD_assoc	PF08494.6	gi|297527079|ref|YP_003669103.1|	-	1.7e-58	197.4	0.2	3.1e-58	196.5	0.1	1.5	1	0	0	1	1	1	1	DEAD/H	associated
DEAD	PF00270.24	gi|297527079|ref|YP_003669103.1|	-	2.9e-29	101.7	0.0	4.8e-28	97.7	0.0	2.5	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|297527079|ref|YP_003669103.1|	-	1.3e-14	53.7	0.0	9.4e-14	51.0	0.0	2.4	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|297527079|ref|YP_003669103.1|	-	2.8e-09	37.0	0.0	1.2e-08	34.9	0.0	1.9	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
AAA_22	PF13401.1	gi|297527079|ref|YP_003669103.1|	-	0.0013	18.8	2.7	0.84	9.7	0.3	3.7	2	1	0	2	2	2	2	AAA	domain
AAA	PF00004.24	gi|297527079|ref|YP_003669103.1|	-	0.012	15.8	6.2	0.93	9.6	1.2	3.7	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
IstB_IS21	PF01695.12	gi|297527079|ref|YP_003669103.1|	-	0.049	13.0	0.3	0.53	9.6	0.0	2.5	3	0	0	3	3	3	0	IstB-like	ATP	binding	protein
SNF2_N	PF00176.18	gi|297527079|ref|YP_003669103.1|	-	0.063	12.0	0.0	0.34	9.6	0.0	2.1	1	1	0	1	1	1	0	SNF2	family	N-terminal	domain
AAA_19	PF13245.1	gi|297527079|ref|YP_003669103.1|	-	0.085	12.6	0.0	0.61	9.8	0.0	2.3	2	0	0	2	2	2	0	Part	of	AAA	domain
PRD_Mga	PF08270.6	gi|297527079|ref|YP_003669103.1|	-	0.12	11.5	1.2	0.55	9.4	0.1	2.3	2	0	0	2	2	2	0	M	protein	trans-acting	positive	regulator	(MGA)	PRD	domain
DUF2192	PF09958.4	gi|297527080|ref|YP_003669104.1|	-	1.6e-88	295.8	6.5	1.9e-88	295.6	4.5	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2192)
Cas_Cas6	PF01881.11	gi|297527081|ref|YP_003669105.1|	-	0.16	12.2	3.8	0.21	11.8	2.5	1.3	1	1	0	1	1	1	0	CRISPR	associated	protein	Cas6
HTH_3	PF01381.17	gi|297527084|ref|YP_003669108.1|	-	1.7e-06	27.7	0.1	3.2e-06	26.8	0.1	1.5	1	0	0	1	1	1	1	Helix-turn-helix
HTH_11	PF08279.7	gi|297527084|ref|YP_003669108.1|	-	1.2e-05	24.7	0.3	3.5e-05	23.3	0.2	1.7	1	0	0	1	1	1	1	HTH	domain
HTH_28	PF13518.1	gi|297527084|ref|YP_003669108.1|	-	0.00017	21.4	0.2	0.00032	20.6	0.1	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|297527084|ref|YP_003669108.1|	-	0.00027	20.4	0.4	0.00056	19.4	0.3	1.5	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_17	PF12728.2	gi|297527084|ref|YP_003669108.1|	-	0.00052	20.2	0.1	0.0011	19.1	0.1	1.6	1	0	0	1	1	1	1	Helix-turn-helix	domain
EutB	PF06751.6	gi|297527084|ref|YP_003669108.1|	-	0.0012	17.2	0.1	0.0013	17.1	0.1	1.0	1	0	0	1	1	1	1	Ethanolamine	ammonia	lyase	large	subunit	(EutB)
MerR	PF00376.18	gi|297527084|ref|YP_003669108.1|	-	0.0015	18.0	1.9	0.01	15.4	0.1	2.5	2	0	0	2	2	2	1	MerR	family	regulatory	protein
Trp_repressor	PF01371.14	gi|297527084|ref|YP_003669108.1|	-	0.0027	17.5	0.5	0.0072	16.2	0.2	1.9	1	1	0	2	2	2	1	Trp	repressor	protein
HTH_Tnp_ISL3	PF13542.1	gi|297527084|ref|YP_003669108.1|	-	0.0031	16.6	0.1	0.006	15.7	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_24	PF13412.1	gi|297527084|ref|YP_003669108.1|	-	0.0032	16.8	0.1	0.011	15.1	0.1	2.0	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
LacI	PF00356.16	gi|297527084|ref|YP_003669108.1|	-	0.0035	16.9	0.0	0.0075	15.8	0.0	1.6	1	0	0	1	1	1	1	Bacterial	regulatory	proteins,	lacI	family
Death	PF00531.17	gi|297527084|ref|YP_003669108.1|	-	0.0037	16.9	0.0	0.008	15.9	0.0	1.5	1	1	0	1	1	1	1	Death	domain
HTH_AsnC-type	PF13404.1	gi|297527084|ref|YP_003669108.1|	-	0.0038	16.7	0.1	0.0087	15.5	0.1	1.7	1	1	0	1	1	1	1	AsnC-type	helix-turn-helix	domain
Linker_histone	PF00538.14	gi|297527084|ref|YP_003669108.1|	-	0.0039	17.2	0.0	0.0077	16.3	0.0	1.5	1	0	0	1	1	1	1	linker	histone	H1	and	H5	family
NUMOD1	PF07453.8	gi|297527084|ref|YP_003669108.1|	-	0.0044	16.8	0.0	0.0092	15.7	0.0	1.6	1	0	0	1	1	1	1	NUMOD1	domain
Sigma70_r4_2	PF08281.7	gi|297527084|ref|YP_003669108.1|	-	0.0099	15.3	0.9	0.026	13.9	0.0	2.1	3	0	0	3	3	3	1	Sigma-70,	region	4
HTH_10	PF04967.7	gi|297527084|ref|YP_003669108.1|	-	0.012	15.1	0.1	0.04	13.5	0.0	1.8	2	0	0	2	2	2	0	HTH	DNA	binding	domain
Phage_CI_repr	PF07022.8	gi|297527084|ref|YP_003669108.1|	-	0.012	15.6	0.1	0.031	14.3	0.0	1.7	3	0	0	3	3	1	0	Bacteriophage	CI	repressor	helix-turn-helix	domain
MerR_1	PF13411.1	gi|297527084|ref|YP_003669108.1|	-	0.017	14.9	0.5	0.042	13.6	0.0	2.0	2	1	0	2	2	2	0	MerR	HTH	family	regulatory	protein
HTH_31	PF13560.1	gi|297527084|ref|YP_003669108.1|	-	0.019	15.1	0.0	0.04	14.1	0.0	1.5	1	0	0	1	1	1	0	Helix-turn-helix	domain
GntR	PF00392.16	gi|297527084|ref|YP_003669108.1|	-	0.021	14.2	0.6	0.18	11.2	0.0	2.4	3	0	0	3	3	2	0	Bacterial	regulatory	proteins,	gntR	family
DnaB_bind	PF10410.4	gi|297527084|ref|YP_003669108.1|	-	0.021	14.8	1.4	1.4	8.9	0.3	2.3	2	0	0	2	2	2	0	DnaB-helicase	binding	domain	of	primase
HTH_29	PF13551.1	gi|297527084|ref|YP_003669108.1|	-	0.038	14.1	0.3	0.1	12.7	0.2	1.8	1	1	0	1	1	1	0	Winged	helix-turn	helix
UPF0122	PF04297.9	gi|297527084|ref|YP_003669108.1|	-	0.05	13.6	0.7	0.065	13.2	0.5	1.3	1	0	0	1	1	1	0	Putative	helix-turn-helix	protein,	YlxM	/	p13	like
HTH_38	PF13936.1	gi|297527084|ref|YP_003669108.1|	-	0.054	13.0	1.0	0.094	12.2	0.3	1.8	2	0	0	2	2	1	0	Helix-turn-helix	domain
Sigma70_ner	PF04546.8	gi|297527084|ref|YP_003669108.1|	-	0.059	12.9	0.1	0.078	12.5	0.1	1.1	1	0	0	1	1	1	0	Sigma-70,	non-essential	region
HTH_Tnp_1	PF01527.15	gi|297527084|ref|YP_003669108.1|	-	0.06	13.3	0.0	0.084	12.8	0.0	1.3	1	0	0	1	1	1	0	Transposase
HTH_DeoR	PF08220.7	gi|297527084|ref|YP_003669108.1|	-	0.066	12.7	0.2	0.16	11.5	0.0	1.8	2	0	0	2	2	2	0	DeoR-like	helix-turn-helix	domain
HTH_6	PF01418.12	gi|297527084|ref|YP_003669108.1|	-	0.066	12.9	0.1	0.48	10.1	0.0	2.3	2	1	1	3	3	3	0	Helix-turn-helix	domain,	rpiR	family
Aminotran_1_2	PF00155.16	gi|297527086|ref|YP_003669110.1|	-	2.7e-40	138.4	0.0	3.5e-40	138.0	0.0	1.1	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_MocR	PF12897.2	gi|297527086|ref|YP_003669110.1|	-	1.7e-08	33.5	0.0	2.4e-08	32.9	0.0	1.3	1	0	0	1	1	1	1	Alanine-glyoxylate	amino-transferase
Aminotran_5	PF00266.14	gi|297527086|ref|YP_003669110.1|	-	1.2e-05	24.1	0.0	1.8e-05	23.6	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.16	gi|297527086|ref|YP_003669110.1|	-	0.0015	17.7	0.0	0.0033	16.5	0.0	1.5	2	0	0	2	2	2	1	Beta-eliminating	lyase
DegT_DnrJ_EryC1	PF01041.12	gi|297527086|ref|YP_003669110.1|	-	0.011	14.7	0.0	0.018	14.0	0.0	1.3	1	0	0	1	1	1	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
Radical_SAM	PF04055.16	gi|297527087|ref|YP_003669111.1|	-	2.1e-07	31.2	0.0	6.8e-07	29.6	0.0	2.0	1	1	0	1	1	1	1	Radical	SAM	superfamily
B12-binding	PF02310.14	gi|297527087|ref|YP_003669111.1|	-	2.8e-06	27.2	0.0	5e-06	26.3	0.0	1.4	1	0	0	1	1	1	1	B12	binding	domain
HMG-CoA_red	PF00368.13	gi|297527088|ref|YP_003669112.1|	-	9.5e-10	37.6	0.6	1.4e-08	33.8	0.0	2.1	2	0	0	2	2	2	2	Hydroxymethylglutaryl-coenzyme	A	reductase
DUF35_N	PF12172.3	gi|297527089|ref|YP_003669113.1|	-	6.5e-10	38.6	0.6	1e-09	38.0	0.4	1.3	1	0	0	1	1	1	1	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
DUF35	PF01796.12	gi|297527089|ref|YP_003669113.1|	-	8.1e-06	25.9	0.0	1.2e-05	25.3	0.0	1.3	1	0	0	1	1	1	1	DUF35	OB-fold	domain
zf-ribbon_3	PF13248.1	gi|297527089|ref|YP_003669113.1|	-	0.00073	18.6	3.3	0.0011	18.1	2.3	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
Methyltransf_13	PF08421.6	gi|297527089|ref|YP_003669113.1|	-	0.0018	17.7	0.1	1.1	8.8	0.0	2.6	3	0	0	3	3	3	2	Putative	zinc	binding	domain
DZR	PF12773.2	gi|297527089|ref|YP_003669113.1|	-	0.004	16.9	0.8	0.0062	16.3	0.6	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
zinc_ribbon_2	PF13240.1	gi|297527089|ref|YP_003669113.1|	-	0.021	14.3	3.9	0.035	13.5	2.7	1.3	1	0	0	1	1	1	0	zinc-ribbon	domain
zf-RanBP	PF00641.13	gi|297527089|ref|YP_003669113.1|	-	0.059	12.4	0.7	0.08	12.0	0.5	1.2	1	0	0	1	1	1	0	Zn-finger	in	Ran	binding	protein	and	others
Tantalus	PF15386.1	gi|297527089|ref|YP_003669113.1|	-	0.095	12.4	0.0	0.18	11.6	0.0	1.5	1	0	0	1	1	1	0	Drosophila	Tantalus-like
zf-CCHC	PF00098.18	gi|297527089|ref|YP_003669113.1|	-	3.5	7.7	5.5	11	6.1	0.7	2.3	2	0	0	2	2	2	0	Zinc	knuckle
ACP_syn_III_C	PF08541.5	gi|297527090|ref|YP_003669114.1|	-	6.6e-11	42.0	0.0	4.7e-10	39.3	0.0	2.3	2	1	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III	C	terminal
ACP_syn_III	PF08545.5	gi|297527090|ref|YP_003669114.1|	-	4.7e-05	22.9	1.0	0.0001	21.8	0.5	1.7	2	0	0	2	2	2	1	3-Oxoacyl-[acyl-carrier-protein	(ACP)]	synthase	III
HMG_CoA_synt_C	PF08540.5	gi|297527090|ref|YP_003669114.1|	-	0.0018	17.8	0.0	0.037	13.5	0.0	2.1	1	1	1	2	2	2	1	Hydroxymethylglutaryl-coenzyme	A	synthase	C	terminal
Thiolase_N	PF00108.18	gi|297527090|ref|YP_003669114.1|	-	0.017	14.0	0.2	0.03	13.2	0.1	1.3	1	0	0	1	1	1	0	Thiolase,	N-terminal	domain
HMG_CoA_synt_N	PF01154.12	gi|297527090|ref|YP_003669114.1|	-	0.025	14.1	0.0	0.038	13.5	0.0	1.3	1	0	0	1	1	1	0	Hydroxymethylglutaryl-coenzyme	A	synthase	N	terminal
Dispanin	PF04505.7	gi|297527090|ref|YP_003669114.1|	-	0.06	12.9	0.5	0.16	11.5	0.4	1.7	1	0	0	1	1	1	0	Interferon-induced	transmembrane	protein
BPD_transp_1	PF00528.17	gi|297527091|ref|YP_003669115.1|	-	5.8e-25	87.8	16.4	5.8e-25	87.8	11.4	2.1	2	1	1	3	3	3	1	Binding-protein-dependent	transport	system	inner	membrane	component
OppC_N	PF12911.2	gi|297527091|ref|YP_003669115.1|	-	8.7e-06	25.0	0.1	8.7e-06	25.0	0.1	2.8	2	0	0	2	2	2	1	N-terminal	TM	domain	of	oligopeptide	transport	permease	C
BPD_transp_1	PF00528.17	gi|297527092|ref|YP_003669116.1|	-	2.7e-35	121.5	18.3	2.7e-35	121.5	12.7	2.3	1	1	0	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
SBP_bac_5	PF00496.17	gi|297527093|ref|YP_003669117.1|	-	3.3e-10	39.3	8.3	1.4e-06	27.3	0.1	3.1	3	1	0	3	3	3	2	Bacterial	extracellular	solute-binding	proteins,	family	5	Middle
Rifin_STEVOR	PF02009.11	gi|297527093|ref|YP_003669117.1|	-	0.14	11.7	5.0	0.21	11.2	3.5	1.2	1	0	0	1	1	1	0	Rifin/stevor	family
Nebulin	PF00880.13	gi|297527094|ref|YP_003669118.1|	-	9.1	6.0	6.3	1.2	8.8	1.3	1.8	2	0	0	2	2	2	0	Nebulin	repeat
ABC_tran	PF00005.22	gi|297527096|ref|YP_003669120.1|	-	1.5e-27	96.5	0.0	3e-27	95.5	0.0	1.5	1	1	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|297527096|ref|YP_003669120.1|	-	1.2e-19	70.3	0.2	2.4e-19	69.4	0.1	1.5	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|297527096|ref|YP_003669120.1|	-	1.3e-07	31.9	0.0	1.5e-05	25.1	0.0	2.2	1	1	1	2	2	2	2	AAA	domain
AAA_18	PF13238.1	gi|297527096|ref|YP_003669120.1|	-	0.01	16.1	0.0	0.02	15.1	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
KaiC	PF06745.8	gi|297527096|ref|YP_003669120.1|	-	0.057	12.5	1.5	4.1	6.4	0.1	2.2	2	0	0	2	2	2	0	KaiC
AAA_13	PF13166.1	gi|297527096|ref|YP_003669120.1|	-	0.062	11.7	0.0	0.11	10.9	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
PRK	PF00485.13	gi|297527096|ref|YP_003669120.1|	-	0.13	11.8	0.2	0.24	10.9	0.2	1.4	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_22	PF13401.1	gi|297527096|ref|YP_003669120.1|	-	0.14	12.2	0.1	0.9	9.6	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
AAA_29	PF13555.1	gi|297527096|ref|YP_003669120.1|	-	0.15	11.6	0.2	0.26	10.8	0.1	1.3	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
ABC_tran	PF00005.22	gi|297527097|ref|YP_003669121.1|	-	1.6e-30	106.1	0.0	2.5e-30	105.5	0.0	1.3	1	0	0	1	1	1	1	ABC	transporter
oligo_HPY	PF08352.7	gi|297527097|ref|YP_003669121.1|	-	1.1e-21	76.9	0.1	2e-21	76.0	0.1	1.5	1	0	0	1	1	1	1	Oligopeptide/dipeptide	transporter,	C-terminal	region
AAA_21	PF13304.1	gi|297527097|ref|YP_003669121.1|	-	4.1e-10	40.1	0.1	5.9e-09	36.3	0.0	2.1	1	1	1	2	2	2	1	AAA	domain
SMC_N	PF02463.14	gi|297527097|ref|YP_003669121.1|	-	7.4e-08	31.8	0.7	8.2e-07	28.4	0.2	2.1	2	0	0	2	2	2	1	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|297527097|ref|YP_003669121.1|	-	0.00053	19.1	0.2	0.0024	17.0	0.0	1.9	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_25	PF13481.1	gi|297527097|ref|YP_003669121.1|	-	0.0031	16.9	0.0	0.051	12.9	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|297527097|ref|YP_003669121.1|	-	0.0046	16.4	0.9	0.98	8.8	0.0	2.2	2	0	0	2	2	2	2	FtsK/SpoIIIE	family
AAA_29	PF13555.1	gi|297527097|ref|YP_003669121.1|	-	0.012	15.0	0.0	0.025	14.0	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
ATP-synt_ab	PF00006.20	gi|297527097|ref|YP_003669121.1|	-	0.015	14.8	0.1	0.031	13.7	0.0	1.6	1	1	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
PRK	PF00485.13	gi|297527097|ref|YP_003669121.1|	-	0.03	13.8	0.0	0.045	13.3	0.0	1.4	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
AAA_22	PF13401.1	gi|297527097|ref|YP_003669121.1|	-	0.04	14.0	2.6	1.1	9.3	1.7	2.6	1	1	1	2	2	2	0	AAA	domain
AAA_18	PF13238.1	gi|297527097|ref|YP_003669121.1|	-	0.046	14.0	0.0	0.5	10.6	0.0	2.1	2	0	0	2	2	2	0	AAA	domain
AAA_10	PF12846.2	gi|297527097|ref|YP_003669121.1|	-	0.051	12.9	0.2	6.1	6.1	0.0	2.2	2	0	0	2	2	2	0	AAA-like	domain
AAA_13	PF13166.1	gi|297527097|ref|YP_003669121.1|	-	0.052	12.0	0.0	0.12	10.8	0.0	1.5	2	0	0	2	2	2	0	AAA	domain
DUF258	PF03193.11	gi|297527097|ref|YP_003669121.1|	-	0.054	12.6	0.0	0.097	11.8	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
Rad17	PF03215.10	gi|297527097|ref|YP_003669121.1|	-	0.063	11.9	0.0	0.22	10.1	0.0	1.7	2	0	0	2	2	2	0	Rad17	cell	cycle	checkpoint	protein
AAA	PF00004.24	gi|297527097|ref|YP_003669121.1|	-	0.069	13.3	0.5	1.4	9.1	0.4	2.2	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
NB-ARC	PF00931.17	gi|297527097|ref|YP_003669121.1|	-	0.076	11.8	1.0	1.6	7.5	0.0	2.4	3	0	0	3	3	3	0	NB-ARC	domain
RNA_helicase	PF00910.17	gi|297527097|ref|YP_003669121.1|	-	0.085	13.0	0.0	0.22	11.7	0.0	1.7	1	0	0	1	1	1	0	RNA	helicase
DUF87	PF01935.12	gi|297527097|ref|YP_003669121.1|	-	0.094	12.5	0.5	0.65	9.7	0.0	2.1	2	1	0	2	2	2	0	Domain	of	unknown	function	DUF87
Methyltransf_18	PF12847.2	gi|297527098|ref|YP_003669122.1|	-	4.8e-09	36.7	0.0	6.6e-09	36.3	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|297527098|ref|YP_003669122.1|	-	1.2e-06	28.5	0.0	1.6e-06	28.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
RrnaAD	PF00398.15	gi|297527098|ref|YP_003669122.1|	-	6.2e-05	22.1	0.0	7.3e-05	21.9	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
CMAS	PF02353.15	gi|297527098|ref|YP_003669122.1|	-	0.0061	15.6	0.0	0.008	15.2	0.0	1.1	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Cons_hypoth95	PF03602.10	gi|297527098|ref|YP_003669122.1|	-	0.01	15.2	0.0	0.014	14.8	0.0	1.1	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
DOT1	PF08123.8	gi|297527098|ref|YP_003669122.1|	-	0.02	14.2	0.0	0.061	12.6	0.0	1.7	2	0	0	2	2	2	0	Histone	methylation	protein	DOT1
Methyltransf_23	PF13489.1	gi|297527098|ref|YP_003669122.1|	-	0.16	11.6	0.0	0.19	11.4	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
Radical_SAM	PF04055.16	gi|297527099|ref|YP_003669123.1|	-	1.3e-22	80.6	0.0	1.9e-22	80.1	0.0	1.2	1	0	0	1	1	1	1	Radical	SAM	superfamily
Metallophos	PF00149.23	gi|297527100|ref|YP_003669124.1|	-	3.2e-06	26.6	0.8	4.8e-05	22.8	0.5	2.3	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|297527100|ref|YP_003669124.1|	-	1.6e-05	24.8	0.0	5.7e-05	23.0	0.0	1.9	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
CBF_beta	PF02312.12	gi|297527101|ref|YP_003669125.1|	-	0.075	12.6	0.1	0.17	11.4	0.0	1.6	2	0	0	2	2	2	0	Core	binding	factor	beta	subunit
PapC_N	PF13954.1	gi|297527101|ref|YP_003669125.1|	-	0.12	11.9	0.2	0.84	9.2	0.1	2.1	2	0	0	2	2	2	0	PapC	N-terminal	domain
Peptidase_M48	PF01435.13	gi|297527102|ref|YP_003669126.1|	-	1.9e-44	151.9	0.0	2.9e-44	151.2	0.0	1.3	1	0	0	1	1	1	1	Peptidase	family	M48
Yip1	PF04893.12	gi|297527102|ref|YP_003669126.1|	-	0.0016	17.9	17.8	0.058	12.8	8.1	2.2	2	0	0	2	2	2	2	Yip1	domain
Tetraspannin	PF00335.15	gi|297527102|ref|YP_003669126.1|	-	0.036	13.3	0.1	0.036	13.3	0.1	2.2	2	0	0	2	2	2	0	Tetraspanin	family
Peptidase_M56	PF05569.6	gi|297527102|ref|YP_003669126.1|	-	0.24	10.3	3.2	0.14	11.0	0.7	1.9	2	1	0	2	2	2	0	BlaR1	peptidase	M56
DUF2443	PF10398.4	gi|297527103|ref|YP_003669127.1|	-	0.015	15.0	0.2	0.027	14.2	0.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2443)
VASP_tetra	PF08776.6	gi|297527103|ref|YP_003669127.1|	-	0.11	11.8	0.4	0.28	10.5	0.3	1.6	1	0	0	1	1	1	0	VASP	tetramerisation	domain
TBP	PF00352.16	gi|297527104|ref|YP_003669128.1|	-	3.3e-67	221.8	0.2	1.3e-32	111.0	0.0	2.1	2	0	0	2	2	2	2	Transcription	factor	TFIID	(or	TATA-binding	protein,	TBP)
DUF3378	PF11858.3	gi|297527104|ref|YP_003669128.1|	-	6.4e-05	22.9	0.0	0.32	11.0	0.0	2.3	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF3378)
Spore_YhaL	PF14147.1	gi|297527104|ref|YP_003669128.1|	-	0.023	14.1	0.4	0.29	10.6	0.1	2.4	2	0	0	2	2	2	0	Sporulation	protein	YhaL
DUF2624	PF11116.3	gi|297527104|ref|YP_003669128.1|	-	0.11	13.0	0.3	0.23	11.9	0.2	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2624)
DUF2070	PF09843.4	gi|297527105|ref|YP_003669129.1|	-	6.4e-12	45.2	0.0	1e-11	44.6	0.0	1.3	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2070)
Spore_III_AF	PF09581.5	gi|297527105|ref|YP_003669129.1|	-	0.0059	16.4	0.1	0.017	15.0	0.1	1.8	1	0	0	1	1	1	1	Stage	III	sporulation	protein	AF	(Spore_III_AF)
MitoNEET_N	PF10660.4	gi|297527106|ref|YP_003669130.1|	-	5.3	6.9	7.4	6.3	6.7	0.3	2.8	2	1	0	2	2	2	0	Iron-containing	outer	mitochondrial	membrane	protein	N-terminus
DNA_ligase_A_M	PF01068.16	gi|297527107|ref|YP_003669131.1|	-	1.1e-59	201.2	0.4	1.7e-59	200.6	0.3	1.3	1	0	0	1	1	1	1	ATP	dependent	DNA	ligase	domain
DNA_ligase_A_N	PF04675.9	gi|297527107|ref|YP_003669131.1|	-	1.3e-55	187.9	0.2	2e-55	187.3	0.2	1.3	1	0	0	1	1	1	1	DNA	ligase	N	terminus
DNA_ligase_A_C	PF04679.10	gi|297527107|ref|YP_003669131.1|	-	2.2e-26	92.0	0.0	6.2e-26	90.6	0.0	1.8	2	0	0	2	2	2	1	ATP	dependent	DNA	ligase	C	terminal	region
DNA_ligase_OB_2	PF14743.1	gi|297527107|ref|YP_003669131.1|	-	0.0073	15.9	0.9	0.42	10.3	0.0	3.2	3	0	0	3	3	3	1	DNA	ligase	OB-like	domain
Lon_C	PF05362.8	gi|297527108|ref|YP_003669132.1|	-	0.0026	17.1	0.0	0.004	16.4	0.0	1.2	1	0	0	1	1	1	1	Lon	protease	(S16)	C-terminal	proteolytic	domain
Birna_VP4	PF01768.11	gi|297527108|ref|YP_003669132.1|	-	0.039	13.0	0.1	0.089	11.8	0.0	1.6	2	0	0	2	2	2	0	Birnavirus	VP4	protein
UDG	PF03167.14	gi|297527109|ref|YP_003669133.1|	-	1.5e-44	151.1	0.0	2.3e-44	150.5	0.0	1.2	1	0	0	1	1	1	1	Uracil	DNA	glycosylase	superfamily
GtrA	PF04138.9	gi|297527110|ref|YP_003669134.1|	-	2.5e-20	72.6	13.3	2.7e-20	72.4	8.7	1.5	2	0	0	2	2	2	1	GtrA-like	protein
Plus-3	PF03126.13	gi|297527111|ref|YP_003669135.1|	-	0.096	12.7	0.2	0.11	12.5	0.1	1.2	1	0	0	1	1	1	0	Plus-3	domain
Hydrolase_3	PF08282.7	gi|297527111|ref|YP_003669135.1|	-	0.1	12.1	0.3	0.12	11.9	0.2	1.0	1	0	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
Tudor-knot	PF11717.3	gi|297527111|ref|YP_003669135.1|	-	0.19	11.4	1.6	0.27	10.9	0.5	1.7	1	1	1	2	2	2	0	RNA	binding	activity-knot	of	a	chromodomain
PDZ_2	PF13180.1	gi|297527111|ref|YP_003669135.1|	-	0.19	11.6	1.2	1.8	8.4	0.0	2.1	1	1	1	2	2	2	0	PDZ	domain
DUF3244	PF11589.3	gi|297527112|ref|YP_003669136.1|	-	0.013	15.2	0.5	0.019	14.6	0.4	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF3244)
DUF1902	PF08972.6	gi|297527112|ref|YP_003669136.1|	-	0.054	13.0	0.0	3	7.4	0.0	2.7	2	1	1	3	3	3	0	Domain	of	unknown	function	(DUF1902)
Hydrolase_6	PF13344.1	gi|297527113|ref|YP_003669137.1|	-	2e-23	82.1	0.0	3.6e-23	81.3	0.0	1.4	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|297527113|ref|YP_003669137.1|	-	9.3e-18	63.7	0.0	2e-17	62.6	0.0	1.6	1	0	0	1	1	1	1	HAD-hyrolase-like
Hydrolase	PF00702.21	gi|297527113|ref|YP_003669137.1|	-	2.7e-06	27.9	0.0	3e-05	24.5	0.0	2.2	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD_2	PF13419.1	gi|297527113|ref|YP_003669137.1|	-	0.0042	17.3	0.0	0.59	10.3	0.0	2.4	2	1	0	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
PGP_phosphatase	PF09419.5	gi|297527113|ref|YP_003669137.1|	-	0.041	13.2	0.1	0.099	11.9	0.0	1.6	2	0	0	2	2	2	0	Mitochondrial	PGP	phosphatase
Hydrolase_3	PF08282.7	gi|297527113|ref|YP_003669137.1|	-	0.051	13.1	0.0	0.1	12.1	0.0	1.5	1	0	0	1	1	1	0	haloacid	dehalogenase-like	hydrolase
Acid_phosphat_B	PF03767.9	gi|297527113|ref|YP_003669137.1|	-	0.072	12.4	0.1	0.15	11.3	0.1	1.5	1	1	0	1	1	1	0	HAD	superfamily,	subfamily	IIIB	(Acid	phosphatase)
Metallophos	PF00149.23	gi|297527114|ref|YP_003669138.1|	-	3.5e-17	62.4	0.6	4.9e-17	61.9	0.4	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|297527114|ref|YP_003669138.1|	-	4.8e-16	58.9	0.0	7.9e-16	58.2	0.0	1.3	1	1	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
Metallophos_3	PF14582.1	gi|297527114|ref|YP_003669138.1|	-	1.5e-13	50.4	1.0	4.6e-11	42.3	0.7	2.1	1	1	0	1	1	1	1	Metallophosphoesterase,	calcineurin	superfamily
NAD_synthase	PF02540.12	gi|297527115|ref|YP_003669139.1|	-	7.2e-76	254.2	0.0	8.6e-76	254.0	0.0	1.0	1	0	0	1	1	1	1	NAD	synthase
tRNA_Me_trans	PF03054.11	gi|297527115|ref|YP_003669139.1|	-	1.9e-07	29.9	0.0	5.6e-05	21.8	0.0	2.5	2	0	0	2	2	2	2	tRNA	methyl	transferase
PAPS_reduct	PF01507.14	gi|297527115|ref|YP_003669139.1|	-	0.00093	19.0	0.0	0.0016	18.2	0.0	1.4	1	0	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
QueC	PF06508.8	gi|297527115|ref|YP_003669139.1|	-	0.0033	16.7	0.0	0.0092	15.2	0.0	1.7	2	0	0	2	2	2	1	Queuosine	biosynthesis	protein	QueC
ATP_bind_3	PF01171.15	gi|297527115|ref|YP_003669139.1|	-	0.027	13.9	0.0	0.038	13.4	0.0	1.3	1	0	0	1	1	1	0	PP-loop	family
Asn_synthase	PF00733.16	gi|297527115|ref|YP_003669139.1|	-	0.097	12.1	0.0	0.15	11.5	0.0	1.4	1	0	0	1	1	1	0	Asparagine	synthase
AMMECR1	PF01871.12	gi|297527116|ref|YP_003669140.1|	-	4.8e-53	178.8	0.0	5.7e-53	178.5	0.0	1.0	1	0	0	1	1	1	1	AMMECR1
Mut7-C	PF01927.11	gi|297527117|ref|YP_003669141.1|	-	9.7e-50	168.3	0.0	1.1e-49	168.1	0.0	1.0	1	0	0	1	1	1	1	Mut7-C	RNAse	domain
DUF4428	PF14471.1	gi|297527117|ref|YP_003669141.1|	-	0.0065	16.1	2.6	0.25	11.1	1.8	2.3	1	1	0	1	1	1	1	Domain	of	unknown	function	(DUF4428)
DUF3268	PF11672.3	gi|297527117|ref|YP_003669141.1|	-	0.041	13.9	0.5	0.14	12.2	0.1	2.0	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF3268)
DUF3279	PF11682.3	gi|297527117|ref|YP_003669141.1|	-	0.11	12.0	0.3	0.19	11.2	0.2	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3279)
Prok-RING_1	PF14446.1	gi|297527117|ref|YP_003669141.1|	-	0.14	11.9	1.1	13	5.6	0.0	2.3	1	1	1	2	2	2	0	Prokaryotic	RING	finger	family	1
CBS	PF00571.23	gi|297527118|ref|YP_003669142.1|	-	2.1e-33	113.8	12.2	7.3e-09	35.2	0.3	4.2	4	0	0	4	4	4	4	CBS	domain
CBS	PF00571.23	gi|297527119|ref|YP_003669143.1|	-	6.2e-47	157.1	14.8	1e-14	53.9	1.3	4.1	4	0	0	4	4	4	4	CBS	domain
CBS	PF00571.23	gi|297527120|ref|YP_003669144.1|	-	9.7e-32	108.5	1.6	7.1e-16	57.7	0.3	2.1	2	0	0	2	2	2	2	CBS	domain
DUF2004	PF09406.5	gi|297527120|ref|YP_003669144.1|	-	0.14	12.2	0.1	0.32	11.0	0.1	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF2004)
LSM	PF01423.17	gi|297527121|ref|YP_003669145.1|	-	2.5e-19	68.5	0.2	2.9e-19	68.3	0.1	1.1	1	0	0	1	1	1	1	LSM	domain
SM-ATX	PF14438.1	gi|297527121|ref|YP_003669145.1|	-	0.00073	19.4	0.1	0.00095	19.0	0.0	1.2	1	0	0	1	1	1	1	Ataxin	2	SM	domain
BRCA-2_OB3	PF09104.5	gi|297527121|ref|YP_003669145.1|	-	0.14	12.0	0.0	0.16	11.7	0.0	1.1	1	0	0	1	1	1	0	BRCA2,	oligonucleotide/oligosaccharide-binding,	domain	3
Methyltransf_11	PF08241.7	gi|297527122|ref|YP_003669146.1|	-	1.5e-13	50.9	0.0	2.1e-13	50.5	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|297527122|ref|YP_003669146.1|	-	3.1e-13	49.7	0.0	4e-13	49.3	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|297527122|ref|YP_003669146.1|	-	2.8e-12	47.1	0.0	3.8e-12	46.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|297527122|ref|YP_003669146.1|	-	2e-10	40.4	0.0	2.9e-10	39.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|297527122|ref|YP_003669146.1|	-	1.6e-09	38.1	0.0	3.3e-09	37.1	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
CMAS	PF02353.15	gi|297527122|ref|YP_003669146.1|	-	1.3e-08	34.3	0.0	1.6e-08	34.0	0.0	1.1	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
Methyltransf_25	PF13649.1	gi|297527122|ref|YP_003669146.1|	-	1.9e-05	24.9	0.0	2.9e-05	24.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|297527122|ref|YP_003669146.1|	-	0.0021	17.2	0.0	0.0024	17.0	0.0	1.1	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
MTS	PF05175.9	gi|297527122|ref|YP_003669146.1|	-	0.0071	15.7	0.0	0.0095	15.3	0.0	1.3	1	1	0	1	1	1	1	Methyltransferase	small	domain
TehB	PF03848.9	gi|297527122|ref|YP_003669146.1|	-	0.015	14.4	0.1	0.018	14.1	0.1	1.2	1	0	0	1	1	1	0	Tellurite	resistance	protein	TehB
Methyltransf_9	PF08003.6	gi|297527122|ref|YP_003669146.1|	-	0.023	13.4	0.0	0.026	13.2	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1698)
MetW	PF07021.7	gi|297527122|ref|YP_003669146.1|	-	0.026	13.8	0.1	0.047	13.0	0.1	1.3	1	1	0	1	1	1	0	Methionine	biosynthesis	protein	MetW
PCMT	PF01135.14	gi|297527122|ref|YP_003669146.1|	-	0.029	13.9	0.0	0.04	13.4	0.0	1.3	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_26	PF13659.1	gi|297527122|ref|YP_003669146.1|	-	0.05	13.6	0.0	0.077	13.0	0.0	1.4	1	1	0	1	1	1	0	Methyltransferase	domain
DUF91	PF01939.11	gi|297527123|ref|YP_003669147.1|	-	5.8e-54	182.6	0.1	7.2e-54	182.3	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF91
DUF1626	PF07788.6	gi|297527123|ref|YP_003669147.1|	-	0.00039	20.1	0.1	0.0011	18.7	0.0	1.8	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1626)
RNA_Me_trans	PF04252.8	gi|297527125|ref|YP_003669149.1|	-	1.3e-40	138.9	0.1	1.6e-40	138.6	0.1	1.0	1	0	0	1	1	1	1	Predicted	SAM-dependent	RNA	methyltransferase
tRNA_m1G_MT	PF01746.16	gi|297527125|ref|YP_003669149.1|	-	0.0039	16.8	0.0	0.005	16.4	0.0	1.2	1	0	0	1	1	1	1	tRNA	(Guanine-1)-methyltransferase
FbpA	PF05833.6	gi|297527127|ref|YP_003669151.1|	-	4.8e-46	157.2	16.0	4.8e-46	157.2	11.1	1.6	2	0	0	2	2	2	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
DUF814	PF05670.8	gi|297527127|ref|YP_003669151.1|	-	3.3e-29	100.6	0.0	7.4e-29	99.4	0.0	1.6	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF814)
MRP-S26	PF14943.1	gi|297527127|ref|YP_003669151.1|	-	1.4	8.4	13.3	0.077	12.5	3.4	2.3	2	0	0	2	2	2	0	Mitochondrial	ribosome	subunit	S26
PhoU_div	PF01865.11	gi|297527127|ref|YP_003669151.1|	-	9.8	5.2	12.2	0.59	9.2	0.2	3.3	2	1	1	3	3	3	0	Protein	of	unknown	function	DUF47
AdoMet_Synthase	PF01941.14	gi|297527128|ref|YP_003669152.1|	-	5.8e-176	584.8	3.2	6.8e-176	584.5	2.2	1.0	1	0	0	1	1	1	1	S-adenosylmethionine	synthetase	(AdoMet	synthetase)
DUF460	PF04312.8	gi|297527129|ref|YP_003669153.1|	-	5.5e-49	165.2	1.2	1e-46	157.9	0.0	2.9	3	0	0	3	3	3	2	Protein	of	unknown	function	(DUF460)
MutS_III	PF05192.13	gi|297527129|ref|YP_003669153.1|	-	0.0097	15.7	6.9	0.024	14.4	4.6	1.7	1	1	0	1	1	1	1	MutS	domain	III
Atg14	PF10186.4	gi|297527129|ref|YP_003669153.1|	-	0.12	11.2	16.2	0.26	10.1	11.3	1.6	1	0	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
DUF429	PF04250.8	gi|297527129|ref|YP_003669153.1|	-	0.18	11.0	0.8	2.2	7.4	0.1	2.8	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF429)
TMF_DNA_bd	PF12329.3	gi|297527129|ref|YP_003669153.1|	-	0.53	10.1	28.5	0.066	13.0	5.2	4.2	2	1	1	3	3	3	0	TATA	element	modulatory	factor	1	DNA	binding
DUF1664	PF07889.7	gi|297527129|ref|YP_003669153.1|	-	9.7	6.0	11.9	4.4	7.1	5.5	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1664)
RIO1	PF01163.17	gi|297527130|ref|YP_003669154.1|	-	1.5e-43	148.3	0.0	2.1e-43	147.8	0.0	1.2	1	0	0	1	1	1	1	RIO1	family
Rio2_N	PF09202.6	gi|297527130|ref|YP_003669154.1|	-	8.4e-22	77.0	0.8	1.4e-21	76.3	0.6	1.4	1	0	0	1	1	1	1	Rio2,	N-terminal
APH	PF01636.18	gi|297527130|ref|YP_003669154.1|	-	2.1e-07	30.9	0.4	1.5e-06	28.1	0.1	2.1	1	1	1	2	2	2	1	Phosphotransferase	enzyme	family
Kdo	PF06293.9	gi|297527130|ref|YP_003669154.1|	-	0.0026	16.8	0.1	0.038	13.0	0.1	2.2	1	1	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
Pkinase	PF00069.20	gi|297527130|ref|YP_003669154.1|	-	0.019	14.1	0.0	0.046	12.8	0.0	1.6	1	1	0	1	1	1	0	Protein	kinase	domain
Phage_rep_O	PF04492.8	gi|297527130|ref|YP_003669154.1|	-	0.024	14.8	0.2	8.7	6.6	0.0	2.7	3	0	0	3	3	3	0	Bacteriophage	replication	protein	O
HTH_27	PF13463.1	gi|297527130|ref|YP_003669154.1|	-	0.065	13.5	0.0	0.17	12.1	0.0	1.8	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_5	PF01022.15	gi|297527131|ref|YP_003669155.1|	-	2.2e-12	46.4	0.9	3.7e-12	45.7	0.6	1.4	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_24	PF13412.1	gi|297527131|ref|YP_003669155.1|	-	9.5e-12	44.1	0.6	1.7e-11	43.2	0.4	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
HTH_20	PF12840.2	gi|297527131|ref|YP_003669155.1|	-	1e-09	38.0	0.0	1.5e-09	37.4	0.0	1.1	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR_2	PF12802.2	gi|297527131|ref|YP_003669155.1|	-	7.7e-09	35.0	0.0	1.1e-08	34.6	0.0	1.2	1	0	0	1	1	1	1	MarR	family
MarR	PF01047.17	gi|297527131|ref|YP_003669155.1|	-	4.1e-08	32.7	0.1	6.6e-08	32.1	0.1	1.3	1	0	0	1	1	1	1	MarR	family
HTH_11	PF08279.7	gi|297527131|ref|YP_003669155.1|	-	9.3e-06	25.2	1.2	4.9e-05	22.8	0.3	2.2	1	1	1	2	2	2	1	HTH	domain
HTH_34	PF13601.1	gi|297527131|ref|YP_003669155.1|	-	3.8e-05	23.6	0.1	6.1e-05	22.9	0.0	1.3	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_36	PF13730.1	gi|297527131|ref|YP_003669155.1|	-	6.2e-05	23.0	0.5	0.0001	22.3	0.3	1.4	1	0	0	1	1	1	1	Helix-turn-helix	domain
Rrf2	PF02082.15	gi|297527131|ref|YP_003669155.1|	-	8e-05	22.6	0.1	0.00012	22.1	0.1	1.3	1	0	0	1	1	1	1	Transcriptional	regulator
HTH_27	PF13463.1	gi|297527131|ref|YP_003669155.1|	-	0.00011	22.4	0.1	0.00017	21.8	0.0	1.5	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
TrmB	PF01978.14	gi|297527131|ref|YP_003669155.1|	-	0.00017	21.2	0.2	0.00024	20.7	0.1	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_23	PF13384.1	gi|297527131|ref|YP_003669155.1|	-	0.00028	20.4	0.0	0.00041	19.8	0.0	1.3	1	0	0	1	1	1	1	Homeodomain-like	domain
HTH_IclR	PF09339.5	gi|297527131|ref|YP_003669155.1|	-	0.00094	18.7	0.0	0.0018	17.8	0.0	1.4	1	0	0	1	1	1	1	IclR	helix-turn-helix	domain
DUF2513	PF10711.4	gi|297527131|ref|YP_003669155.1|	-	0.0024	17.9	0.0	0.0038	17.2	0.0	1.3	1	0	0	1	1	1	1	Hypothetical	protein	(DUF2513)
DUF2250	PF10007.4	gi|297527131|ref|YP_003669155.1|	-	0.0049	16.7	0.0	0.0073	16.1	0.0	1.3	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2250)
B-block_TFIIIC	PF04182.7	gi|297527131|ref|YP_003669155.1|	-	0.0079	16.0	0.2	0.014	15.2	0.2	1.4	1	0	0	1	1	1	1	B-block	binding	subunit	of	TFIIIC
RPA_C	PF08784.6	gi|297527131|ref|YP_003669155.1|	-	0.0089	16.4	0.0	0.013	15.9	0.0	1.3	1	0	0	1	1	1	1	Replication	protein	A	C	terminal
HTH_28	PF13518.1	gi|297527131|ref|YP_003669155.1|	-	0.014	15.4	0.0	0.022	14.7	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
MerR_1	PF13411.1	gi|297527131|ref|YP_003669155.1|	-	0.018	14.8	0.1	0.041	13.6	0.0	1.7	2	0	0	2	2	2	0	MerR	HTH	family	regulatory	protein
HTH_Crp_2	PF13545.1	gi|297527131|ref|YP_003669155.1|	-	0.04	13.7	0.5	0.17	11.7	0.0	2.0	1	1	1	2	2	2	0	Crp-like	helix-turn-helix	domain
HTH_3	PF01381.17	gi|297527131|ref|YP_003669155.1|	-	0.049	13.4	0.1	0.2	11.5	0.0	1.9	2	0	0	2	2	2	0	Helix-turn-helix
HTH_40	PF14493.1	gi|297527131|ref|YP_003669155.1|	-	0.057	13.6	0.0	0.077	13.2	0.0	1.3	1	0	0	1	1	1	0	Helix-turn-helix	domain
Fe_dep_repress	PF01325.14	gi|297527131|ref|YP_003669155.1|	-	0.063	13.2	0.0	0.1	12.5	0.0	1.3	1	0	0	1	1	1	0	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
RNA_pol_Rpc34	PF05158.7	gi|297527131|ref|YP_003669155.1|	-	0.072	12.2	0.7	0.087	11.9	0.5	1.1	1	0	0	1	1	1	0	RNA	polymerase	Rpc34	subunit
Sigma70_r4_2	PF08281.7	gi|297527131|ref|YP_003669155.1|	-	0.092	12.2	0.0	0.16	11.4	0.0	1.4	1	0	0	1	1	1	0	Sigma-70,	region	4
MerR	PF00376.18	gi|297527131|ref|YP_003669155.1|	-	0.1	12.1	0.3	0.38	10.3	0.1	1.9	2	0	0	2	2	2	0	MerR	family	regulatory	protein
Pyridoxal_deC	PF00282.14	gi|297527134|ref|YP_003669158.1|	-	2.7e-30	105.0	0.0	8e-30	103.5	0.0	1.7	1	1	0	1	1	1	1	Pyridoxal-dependent	decarboxylase	conserved	domain
Aminotran_1_2	PF00155.16	gi|297527134|ref|YP_003669158.1|	-	4.7e-11	42.2	0.2	3.6e-10	39.3	0.0	2.3	2	1	0	3	3	3	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.14	gi|297527134|ref|YP_003669158.1|	-	6.3e-10	38.3	0.0	2.2e-09	36.5	0.0	1.8	2	0	0	2	2	2	1	Aminotransferase	class-V
Beta_elim_lyase	PF01212.16	gi|297527134|ref|YP_003669158.1|	-	2.1e-07	30.3	0.0	4.1e-07	29.4	0.0	1.5	1	1	0	1	1	1	1	Beta-eliminating	lyase
OKR_DC_1	PF01276.15	gi|297527134|ref|YP_003669158.1|	-	0.011	14.3	0.1	0.033	12.7	0.1	1.6	1	1	0	1	1	1	0	Orn/Lys/Arg	decarboxylase,	major	domain
SLA_LP_auto_ag	PF05889.8	gi|297527134|ref|YP_003669158.1|	-	0.012	14.1	0.0	0.015	13.8	0.0	1.2	1	0	0	1	1	1	0	Soluble	liver	antigen/liver	pancreas	antigen	(SLA/LP	autoantigen)
TIP49	PF06068.8	gi|297527135|ref|YP_003669159.1|	-	8.2e-164	545.0	1.9	9.7e-164	544.8	1.3	1.0	1	0	0	1	1	1	1	TIP49	C-terminus
AAA	PF00004.24	gi|297527135|ref|YP_003669159.1|	-	1.8e-12	47.6	0.4	3.7e-09	36.8	0.0	2.5	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
RuvB_N	PF05496.7	gi|297527135|ref|YP_003669159.1|	-	2.7e-08	33.1	3.3	1.3e-05	24.3	0.0	3.2	2	1	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_22	PF13401.1	gi|297527135|ref|YP_003669159.1|	-	4.9e-08	33.1	0.0	0.0067	16.5	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
AAA_18	PF13238.1	gi|297527135|ref|YP_003669159.1|	-	8.9e-07	29.2	0.0	3.5e-06	27.3	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|297527135|ref|YP_003669159.1|	-	1e-06	28.8	0.0	0.0011	18.9	0.0	2.3	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_19	PF13245.1	gi|297527135|ref|YP_003669159.1|	-	5.2e-05	22.9	0.0	0.00011	21.8	0.0	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_17	PF13207.1	gi|297527135|ref|YP_003669159.1|	-	6.1e-05	23.8	0.6	0.00027	21.7	0.0	2.4	3	1	0	3	3	2	1	AAA	domain
AAA_25	PF13481.1	gi|297527135|ref|YP_003669159.1|	-	0.0001	21.8	0.1	0.0002	20.8	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_5	PF07728.9	gi|297527135|ref|YP_003669159.1|	-	0.00024	20.8	0.0	0.00086	19.0	0.0	2.0	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
IstB_IS21	PF01695.12	gi|297527135|ref|YP_003669159.1|	-	0.00046	19.6	0.1	0.00097	18.5	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_28	PF13521.1	gi|297527135|ref|YP_003669159.1|	-	0.0008	19.4	0.1	0.0033	17.4	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
Mg_chelatase	PF01078.16	gi|297527135|ref|YP_003669159.1|	-	0.0011	18.1	0.3	0.0035	16.5	0.1	1.8	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
DUF2075	PF09848.4	gi|297527135|ref|YP_003669159.1|	-	0.0019	17.2	0.0	0.0037	16.3	0.0	1.4	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
Zeta_toxin	PF06414.7	gi|297527135|ref|YP_003669159.1|	-	0.005	15.9	0.1	0.01	14.9	0.0	1.4	1	0	0	1	1	1	1	Zeta	toxin
TFIID-31kDa	PF02291.10	gi|297527135|ref|YP_003669159.1|	-	0.0066	16.2	0.0	0.059	13.1	0.0	2.3	3	0	0	3	3	2	1	Transcription	initiation	factor	IID,	31kD	subunit
ResIII	PF04851.10	gi|297527135|ref|YP_003669159.1|	-	0.017	14.9	0.1	0.083	12.7	0.0	2.0	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
AAA_11	PF13086.1	gi|297527135|ref|YP_003669159.1|	-	0.017	14.7	0.0	0.031	13.8	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_14	PF13173.1	gi|297527135|ref|YP_003669159.1|	-	0.017	15.0	0.0	1.3	8.9	0.0	2.5	2	0	0	2	2	2	0	AAA	domain
AAA_33	PF13671.1	gi|297527135|ref|YP_003669159.1|	-	0.018	14.9	0.0	0.032	14.0	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
Sigma54_activat	PF00158.21	gi|297527135|ref|YP_003669159.1|	-	0.023	14.2	0.0	0.21	11.0	0.0	2.2	2	0	0	2	2	2	0	Sigma-54	interaction	domain
PhoH	PF02562.11	gi|297527135|ref|YP_003669159.1|	-	0.034	13.3	0.1	0.088	12.0	0.0	1.6	1	0	0	1	1	1	0	PhoH-like	protein
RNA_helicase	PF00910.17	gi|297527135|ref|YP_003669159.1|	-	0.039	14.1	0.0	0.079	13.1	0.0	1.5	1	0	0	1	1	1	0	RNA	helicase
DnaB_C	PF03796.10	gi|297527135|ref|YP_003669159.1|	-	0.061	12.1	0.1	0.12	11.1	0.0	1.5	1	0	0	1	1	1	0	DnaB-like	helicase	C	terminal	domain
ABC_tran	PF00005.22	gi|297527135|ref|YP_003669159.1|	-	0.064	13.5	0.0	0.13	12.5	0.0	1.5	1	0	0	1	1	1	0	ABC	transporter
Zot	PF05707.7	gi|297527135|ref|YP_003669159.1|	-	0.096	12.1	0.2	15	4.9	0.0	2.7	2	1	1	3	3	3	0	Zonular	occludens	toxin	(Zot)
NACHT	PF05729.7	gi|297527135|ref|YP_003669159.1|	-	0.11	12.1	0.0	0.2	11.2	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
HAUS6_N	PF14661.1	gi|297527136|ref|YP_003669160.1|	-	0.033	13.5	1.4	0.33	10.2	0.1	2.2	2	0	0	2	2	2	0	HAUS	augmin-like	complex	subunit	6	N-terminus
DUF4203	PF13886.1	gi|297527136|ref|YP_003669160.1|	-	0.035	13.5	11.0	0.053	12.9	7.6	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4203)
IF-2B	PF01008.12	gi|297527136|ref|YP_003669160.1|	-	0.045	12.7	4.6	0.059	12.3	0.5	2.1	2	0	0	2	2	2	0	Initiation	factor	2	subunit	family
DUF4131	PF13567.1	gi|297527136|ref|YP_003669160.1|	-	0.049	13.0	0.1	0.076	12.4	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
Wzy_C	PF04932.10	gi|297527136|ref|YP_003669160.1|	-	0.12	12.1	9.9	0.06	13.1	5.1	1.7	1	1	0	1	1	1	0	O-Antigen	ligase
SRI	PF08236.6	gi|297527136|ref|YP_003669160.1|	-	0.24	11.3	3.3	0.88	9.5	0.1	2.7	2	0	0	2	2	2	0	SRI	(Set2	Rpb1	interacting)	domain
VIT1	PF01988.14	gi|297527136|ref|YP_003669160.1|	-	2.6	7.4	15.8	2.8	7.3	8.7	2.7	1	1	1	2	2	2	0	VIT	family
3H	PF02829.9	gi|297527137|ref|YP_003669161.1|	-	0.027	14.4	0.5	0.98	9.4	0.0	2.2	2	0	0	2	2	2	0	3H	domain
DUF2153	PF09921.4	gi|297527138|ref|YP_003669162.1|	-	7.7e-54	180.6	4.8	8.7e-54	180.4	3.3	1.0	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2153)
ApoB100_C	PF12491.3	gi|297527138|ref|YP_003669162.1|	-	0.078	12.6	1.6	0.29	10.7	0.2	2.2	2	0	0	2	2	2	0	Apolipoprotein	B100	C	terminal
PRESAN	PF09687.5	gi|297527138|ref|YP_003669162.1|	-	0.12	12.4	2.4	1.1	9.2	0.0	2.1	2	0	0	2	2	2	0	Plasmodium	RESA	N-terminal
Trm112p	PF03966.11	gi|297527139|ref|YP_003669163.1|	-	6.2e-14	52.1	1.8	9.4e-14	51.5	1.3	1.2	1	0	0	1	1	1	1	Trm112p-like	protein
Copper-fist	PF00649.13	gi|297527139|ref|YP_003669163.1|	-	0.044	12.9	1.2	0.071	12.3	0.1	1.9	2	0	0	2	2	2	0	Copper	fist	DNA	binding	domain
Prok-RING_1	PF14446.1	gi|297527139|ref|YP_003669163.1|	-	0.053	13.2	1.1	0.78	9.5	0.3	2.2	2	0	0	2	2	2	0	Prokaryotic	RING	finger	family	1
zf-DNL	PF05180.7	gi|297527139|ref|YP_003669163.1|	-	0.078	12.7	0.5	6.8	6.4	0.0	2.5	2	1	0	2	2	2	0	DNL	zinc	finger
Thioredoxin_4	PF13462.1	gi|297527139|ref|YP_003669163.1|	-	0.13	12.3	0.6	1.6	8.7	0.1	2.1	2	0	0	2	2	2	0	Thioredoxin
DUF164	PF02591.10	gi|297527139|ref|YP_003669163.1|	-	0.19	11.5	4.8	14	5.6	1.2	3.1	2	1	0	2	2	2	0	Putative	zinc	ribbon	domain
DZR	PF12773.2	gi|297527139|ref|YP_003669163.1|	-	0.34	10.7	8.4	3.2	7.6	5.8	2.1	1	1	0	1	1	1	0	Double	zinc	ribbon
Zn_Tnp_IS1595	PF12760.2	gi|297527139|ref|YP_003669163.1|	-	0.47	10.2	8.4	1.1	9.1	0.0	3.1	2	1	1	3	3	3	0	Transposase	zinc-ribbon	domain
zf-FPG_IleRS	PF06827.9	gi|297527139|ref|YP_003669163.1|	-	0.8	9.4	8.4	5.6	6.7	0.1	2.7	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
zf-ribbon_3	PF13248.1	gi|297527139|ref|YP_003669163.1|	-	1.1	8.5	9.9	1	8.6	0.6	2.6	2	1	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|297527139|ref|YP_003669163.1|	-	1.3	8.7	6.9	8.8	6.1	0.5	3.2	3	0	0	3	3	3	0	zinc-ribbon	domain
zf-RING_4	PF14570.1	gi|297527139|ref|YP_003669163.1|	-	1.7	8.2	11.5	23	4.6	0.1	3.1	2	1	0	2	2	2	0	RING/Ubox	like	zinc-binding	domain
PHD	PF00628.24	gi|297527139|ref|YP_003669163.1|	-	3.3	7.4	8.0	7.2	6.3	1.7	3.0	2	1	1	3	3	3	0	PHD-finger
Cys_rich_KTR	PF14205.1	gi|297527139|ref|YP_003669163.1|	-	4.7	6.7	15.8	8.1	5.9	1.7	3.1	2	2	1	3	3	3	0	Cysteine-rich	KTR
zf-UDP	PF14569.1	gi|297527139|ref|YP_003669163.1|	-	6.1	6.6	8.0	3.9	7.2	2.6	2.5	2	1	0	2	2	2	0	Zinc-binding	RING-finger
Sgf11	PF08209.6	gi|297527139|ref|YP_003669163.1|	-	6.8	6.1	7.0	28	4.1	0.1	3.1	3	0	0	3	3	3	0	Sgf11	(transcriptional	regulation	protein)
zinc_ribbon_2	PF13240.1	gi|297527139|ref|YP_003669163.1|	-	9.1	5.9	15.0	5.2	6.6	0.1	3.5	4	0	0	4	4	4	0	zinc-ribbon	domain
PGM_PMM_I	PF02878.11	gi|297527140|ref|YP_003669164.1|	-	3.5e-44	149.6	0.0	9.4e-44	148.2	0.0	1.7	2	0	0	2	2	2	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	I
PGM_PMM_II	PF02879.11	gi|297527140|ref|YP_003669164.1|	-	7.5e-24	84.0	0.0	3.7e-23	81.8	0.0	2.1	2	0	0	2	2	2	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	II
PGM_PMM_III	PF02880.11	gi|297527140|ref|YP_003669164.1|	-	1.1e-21	76.9	0.0	2.7e-21	75.7	0.0	1.6	1	0	0	1	1	1	1	Phosphoglucomutase/phosphomannomutase,	alpha/beta/alpha	domain	III
PGM_PMM_IV	PF00408.15	gi|297527140|ref|YP_003669164.1|	-	8.1e-12	44.9	0.1	2.1e-11	43.6	0.0	1.8	2	0	0	2	2	2	1	Phosphoglucomutase/phosphomannomutase,	C-terminal	domain
DUF3840	PF12944.2	gi|297527141|ref|YP_003669165.1|	-	0.25	11.2	2.4	0.24	11.2	0.7	1.7	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3840)
DUF3647	PF12363.3	gi|297527141|ref|YP_003669165.1|	-	4.3	7.4	5.8	2.1	8.4	0.3	2.2	2	0	0	2	2	2	0	Phage	protein
AP_endonuc_2	PF01261.19	gi|297527143|ref|YP_003669167.1|	-	4.3e-09	35.9	0.0	8.5e-09	35.0	0.0	1.5	1	0	0	1	1	1	1	Xylose	isomerase-like	TIM	barrel
RNase_HII	PF01351.13	gi|297527144|ref|YP_003669168.1|	-	1.3e-37	129.3	0.0	1.5e-37	129.1	0.0	1.0	1	0	0	1	1	1	1	Ribonuclease	HII
ABC_sub_bind	PF04392.7	gi|297527144|ref|YP_003669168.1|	-	0.035	13.0	1.9	0.046	12.6	1.3	1.1	1	0	0	1	1	1	0	ABC	transporter	substrate	binding	protein
TGS	PF02824.16	gi|297527145|ref|YP_003669169.1|	-	3.6e-19	68.3	0.1	7.6e-19	67.3	0.0	1.6	1	0	0	1	1	1	1	TGS	domain
MMR_HSR1	PF01926.18	gi|297527145|ref|YP_003669169.1|	-	2.6e-16	59.6	0.0	6.6e-16	58.3	0.0	1.7	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.13	gi|297527145|ref|YP_003669169.1|	-	8e-10	38.2	0.1	9.6e-09	34.7	0.0	2.4	3	0	0	3	3	3	1	Ferrous	iron	transport	protein	B
GTP_EFTU	PF00009.22	gi|297527145|ref|YP_003669169.1|	-	9.1e-06	25.2	0.5	0.15	11.4	0.1	3.1	1	1	0	2	2	2	2	Elongation	factor	Tu	GTP	binding	domain
Miro	PF08477.8	gi|297527145|ref|YP_003669169.1|	-	2.1e-05	25.0	0.0	6.9e-05	23.3	0.0	1.9	2	0	0	2	2	2	1	Miro-like	protein
Arf	PF00025.16	gi|297527145|ref|YP_003669169.1|	-	0.0024	17.1	0.1	0.014	14.6	0.0	2.3	3	1	0	3	3	3	1	ADP-ribosylation	factor	family
AAA_17	PF13207.1	gi|297527145|ref|YP_003669169.1|	-	0.0054	17.5	0.7	0.018	15.8	0.0	2.5	3	1	0	3	3	1	1	AAA	domain
cobW	PF02492.14	gi|297527145|ref|YP_003669169.1|	-	0.0087	15.5	0.6	1.1	8.7	0.0	2.3	2	0	0	2	2	2	1	CobW/HypB/UreG,	nucleotide-binding	domain
ArgK	PF03308.11	gi|297527145|ref|YP_003669169.1|	-	0.01	14.6	0.2	0.23	10.1	0.0	2.3	2	0	0	2	2	2	0	ArgK	protein
Kinase-PPPase	PF03618.9	gi|297527145|ref|YP_003669169.1|	-	0.015	14.8	0.0	0.038	13.4	0.0	1.6	2	0	0	2	2	2	0	Kinase/pyrophosphorylase
AAA_33	PF13671.1	gi|297527145|ref|YP_003669169.1|	-	0.019	14.8	0.1	0.12	12.2	0.0	2.2	2	1	0	2	2	2	0	AAA	domain
Dynamin_N	PF00350.18	gi|297527145|ref|YP_003669169.1|	-	0.024	14.4	0.1	0.15	11.8	0.1	2.2	1	1	1	2	2	2	0	Dynamin	family
KTI12	PF08433.5	gi|297527145|ref|YP_003669169.1|	-	0.026	13.7	0.0	0.062	12.4	0.0	1.6	1	0	0	1	1	1	0	Chromatin	associated	protein	KTI12
YchF-GTPase_C	PF06071.8	gi|297527145|ref|YP_003669169.1|	-	0.07	12.9	0.4	2	8.2	0.3	2.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF933)
SRPRB	PF09439.5	gi|297527145|ref|YP_003669169.1|	-	0.082	12.1	0.0	0.22	10.7	0.0	1.7	1	0	0	1	1	1	0	Signal	recognition	particle	receptor	beta	subunit
PduV-EutP	PF10662.4	gi|297527145|ref|YP_003669169.1|	-	0.089	12.2	0.4	4.1	6.8	0.0	2.5	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
AAA_28	PF13521.1	gi|297527145|ref|YP_003669169.1|	-	0.13	12.2	0.0	0.29	11.0	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
HSP20	PF00011.16	gi|297527146|ref|YP_003669170.1|	-	1e-06	28.5	0.0	1.7e-06	27.7	0.0	1.4	2	0	0	2	2	2	1	Hsp20/alpha	crystallin	family
PAC2	PF09754.4	gi|297527147|ref|YP_003669171.1|	-	4.2e-39	134.6	0.0	5.2e-39	134.3	0.0	1.0	1	0	0	1	1	1	1	PAC2	family
AAA	PF00004.24	gi|297527148|ref|YP_003669172.1|	-	4e-35	120.9	0.0	7.3e-35	120.0	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
MIT	PF04212.13	gi|297527148|ref|YP_003669172.1|	-	1e-14	54.1	2.3	4.2e-14	52.1	0.9	2.5	2	0	0	2	2	2	1	MIT	(microtubule	interacting	and	transport)	domain
AAA_2	PF07724.9	gi|297527148|ref|YP_003669172.1|	-	1.4e-05	25.1	0.0	2.4e-05	24.3	0.0	1.4	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
TPR_1	PF00515.23	gi|297527148|ref|YP_003669172.1|	-	6.2e-05	22.4	1.4	0.00024	20.5	0.9	2.1	1	0	0	1	1	1	1	Tetratricopeptide	repeat
AAA_17	PF13207.1	gi|297527148|ref|YP_003669172.1|	-	6.2e-05	23.8	0.6	0.00034	21.4	0.0	2.4	2	1	1	3	3	2	1	AAA	domain
AAA_16	PF13191.1	gi|297527148|ref|YP_003669172.1|	-	7.8e-05	22.7	0.0	0.043	13.7	0.0	2.4	1	1	0	2	2	2	1	AAA	ATPase	domain
RuvB_N	PF05496.7	gi|297527148|ref|YP_003669172.1|	-	9.4e-05	21.5	0.1	0.00032	19.8	0.0	2.0	2	1	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_22	PF13401.1	gi|297527148|ref|YP_003669172.1|	-	0.00011	22.3	0.0	0.00086	19.4	0.0	2.5	1	1	0	1	1	1	1	AAA	domain
RNA_helicase	PF00910.17	gi|297527148|ref|YP_003669172.1|	-	0.00034	20.7	0.0	0.0024	18.0	0.0	2.3	2	0	0	2	2	2	1	RNA	helicase
AAA_5	PF07728.9	gi|297527148|ref|YP_003669172.1|	-	0.00036	20.2	0.0	0.001	18.8	0.0	1.9	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA_14	PF13173.1	gi|297527148|ref|YP_003669172.1|	-	0.00095	19.0	0.0	0.0024	17.7	0.0	1.7	2	0	0	2	2	1	1	AAA	domain
TPR_11	PF13414.1	gi|297527148|ref|YP_003669172.1|	-	0.0013	18.3	0.2	0.0037	16.8	0.2	1.8	1	0	0	1	1	1	1	TPR	repeat
TIP49	PF06068.8	gi|297527148|ref|YP_003669172.1|	-	0.0013	17.5	0.0	0.002	16.9	0.0	1.4	1	0	0	1	1	1	1	TIP49	C-terminus
Sigma54_activ_2	PF14532.1	gi|297527148|ref|YP_003669172.1|	-	0.0024	17.9	0.0	0.35	10.9	0.0	2.4	2	0	0	2	2	2	1	Sigma-54	interaction	domain
ATP-synt_ab	PF00006.20	gi|297527148|ref|YP_003669172.1|	-	0.0033	16.9	0.0	0.0058	16.1	0.0	1.4	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
TPR_2	PF07719.12	gi|297527148|ref|YP_003669172.1|	-	0.004	16.9	1.3	0.004	16.9	0.9	2.6	2	1	1	3	3	2	1	Tetratricopeptide	repeat
Zeta_toxin	PF06414.7	gi|297527148|ref|YP_003669172.1|	-	0.0041	16.2	0.0	0.0088	15.1	0.0	1.6	1	0	0	1	1	1	1	Zeta	toxin
IstB_IS21	PF01695.12	gi|297527148|ref|YP_003669172.1|	-	0.0042	16.5	0.0	0.0073	15.7	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
TPR_7	PF13176.1	gi|297527148|ref|YP_003669172.1|	-	0.0044	16.7	0.2	0.015	15.0	0.1	1.9	1	0	0	1	1	1	1	Tetratricopeptide	repeat
TPR_8	PF13181.1	gi|297527148|ref|YP_003669172.1|	-	0.0046	16.6	0.5	0.0046	16.6	0.4	2.5	3	0	0	3	3	1	1	Tetratricopeptide	repeat
Vps4_C	PF09336.5	gi|297527148|ref|YP_003669172.1|	-	0.0047	16.7	0.0	0.019	14.8	0.0	2.0	1	1	1	2	2	2	1	Vps4	C	terminal	oligomerisation	domain
AAA_18	PF13238.1	gi|297527148|ref|YP_003669172.1|	-	0.0052	17.0	0.1	0.021	15.1	0.0	2.1	1	1	0	1	1	1	1	AAA	domain
AAA_25	PF13481.1	gi|297527148|ref|YP_003669172.1|	-	0.01	15.2	0.1	0.063	12.6	0.1	2.0	1	1	0	1	1	1	0	AAA	domain
AAA_33	PF13671.1	gi|297527148|ref|YP_003669172.1|	-	0.016	15.0	0.0	0.032	14.1	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
TPR_12	PF13424.1	gi|297527148|ref|YP_003669172.1|	-	0.02	14.8	0.4	0.061	13.2	0.3	1.8	1	0	0	1	1	1	0	Tetratricopeptide	repeat
Mg_chelatase	PF01078.16	gi|297527148|ref|YP_003669172.1|	-	0.021	14.0	0.0	0.039	13.1	0.0	1.4	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
DUF1296	PF06972.6	gi|297527148|ref|YP_003669172.1|	-	0.051	13.5	0.0	0.24	11.3	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1296)
AAA_19	PF13245.1	gi|297527148|ref|YP_003669172.1|	-	0.054	13.2	0.0	0.11	12.2	0.0	1.4	1	0	0	1	1	1	0	Part	of	AAA	domain
AAA_28	PF13521.1	gi|297527148|ref|YP_003669172.1|	-	0.055	13.4	0.0	0.1	12.5	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
ResIII	PF04851.10	gi|297527148|ref|YP_003669172.1|	-	0.06	13.1	0.1	0.14	11.9	0.0	1.8	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
T2SE	PF00437.15	gi|297527148|ref|YP_003669172.1|	-	0.066	12.1	0.0	0.12	11.2	0.0	1.4	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
Viral_helicase1	PF01443.13	gi|297527148|ref|YP_003669172.1|	-	0.073	12.5	0.0	0.11	11.9	0.0	1.3	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
TPR_17	PF13431.1	gi|297527148|ref|YP_003669172.1|	-	0.096	12.9	0.1	16	6.0	0.0	2.7	2	0	0	2	2	2	0	Tetratricopeptide	repeat
TPR_6	PF13174.1	gi|297527148|ref|YP_003669172.1|	-	0.13	12.8	2.3	2.1	9.0	0.8	3.0	2	1	0	2	2	1	0	Tetratricopeptide	repeat
SNF2_N	PF00176.18	gi|297527148|ref|YP_003669172.1|	-	0.14	10.9	0.0	0.27	10.0	0.0	1.4	1	0	0	1	1	1	0	SNF2	family	N-terminal	domain
Snf7	PF03357.16	gi|297527149|ref|YP_003669173.1|	-	5.9e-05	22.5	0.2	8.2e-05	22.0	0.2	1.2	1	0	0	1	1	1	1	Snf7
TrmB	PF01978.14	gi|297527149|ref|YP_003669173.1|	-	0.0087	15.7	0.0	0.032	13.9	0.0	2.0	2	0	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
Prefoldin_2	PF01920.15	gi|297527149|ref|YP_003669173.1|	-	0.02	14.6	0.5	2.6	7.8	0.0	2.5	2	0	0	2	2	2	0	Prefoldin	subunit
Lipoprotein_7	PF01540.11	gi|297527149|ref|YP_003669173.1|	-	0.036	13.1	1.4	0.057	12.4	1.0	1.3	1	0	0	1	1	1	0	Adhesin	lipoprotein
ALIX_LYPXL_bnd	PF13949.1	gi|297527149|ref|YP_003669173.1|	-	0.042	12.8	1.9	0.32	9.9	1.3	1.9	1	1	0	1	1	1	0	ALIX	V-shaped	domain	binding	to	HIV
Prefoldin	PF02996.12	gi|297527149|ref|YP_003669173.1|	-	0.049	13.2	2.0	0.19	11.3	0.2	2.2	2	0	0	2	2	2	0	Prefoldin	subunit
MarR_2	PF12802.2	gi|297527149|ref|YP_003669173.1|	-	0.061	13.0	0.0	0.12	12.0	0.0	1.5	1	0	0	1	1	1	0	MarR	family
GntR	PF00392.16	gi|297527149|ref|YP_003669173.1|	-	0.08	12.3	0.0	0.19	11.1	0.0	1.7	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	gntR	family
RNB	PF00773.14	gi|297527149|ref|YP_003669173.1|	-	0.081	12.1	0.2	0.12	11.6	0.1	1.3	1	1	0	1	1	1	0	RNB	domain
DUF4122	PF13498.1	gi|297527149|ref|YP_003669173.1|	-	0.12	11.7	0.8	0.27	10.5	0.3	1.6	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4122)
PRC	PF05239.11	gi|297527150|ref|YP_003669174.1|	-	0.00074	19.3	0.8	0.0015	18.3	0.2	1.8	2	0	0	2	2	2	1	PRC-barrel	domain
FH2	PF02181.18	gi|297527150|ref|YP_003669174.1|	-	0.0029	16.5	4.8	0.0029	16.5	3.3	1.8	1	1	0	2	2	2	1	Formin	Homology	2	Domain
DUF4263	PF14082.1	gi|297527150|ref|YP_003669174.1|	-	0.0056	16.6	1.6	0.0092	15.9	0.4	1.8	1	1	0	2	2	2	1	Domain	of	unknown	function	(DUF4263)
DUF2992	PF11208.3	gi|297527150|ref|YP_003669174.1|	-	0.025	14.4	1.8	0.025	14.4	1.3	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2992)
THOC7	PF05615.8	gi|297527150|ref|YP_003669174.1|	-	0.026	14.7	16.6	8.5	6.6	11.5	2.2	1	1	0	1	1	1	0	Tho	complex	subunit	7
GvpG	PF05120.7	gi|297527150|ref|YP_003669174.1|	-	0.033	13.9	0.4	0.033	13.9	0.3	2.6	1	1	2	3	3	3	0	Gas	vesicle	protein	G
P53_C	PF11619.3	gi|297527150|ref|YP_003669174.1|	-	0.035	13.8	1.0	5.1	6.9	0.0	3.1	3	0	0	3	3	3	0	Transcription	factor	P53	-	C	terminal	domain
Syntaxin-18_N	PF10496.4	gi|297527150|ref|YP_003669174.1|	-	0.06	13.1	1.1	0.14	12.0	0.7	1.7	1	0	0	1	1	1	0	SNARE-complex	protein	Syntaxin-18	N-terminus
LepA_C	PF06421.7	gi|297527150|ref|YP_003669174.1|	-	0.092	12.6	2.8	0.16	11.9	1.4	1.7	1	1	0	1	1	1	0	GTP-binding	protein	LepA	C-terminus
RNA_pol_Rpb2_2	PF04561.9	gi|297527150|ref|YP_003669174.1|	-	0.14	11.5	2.9	0.18	11.2	1.5	1.5	1	1	0	1	1	1	0	RNA	polymerase	Rpb2,	domain	2
CENP-Q	PF13094.1	gi|297527150|ref|YP_003669174.1|	-	0.14	12.1	14.6	0.22	11.5	10.1	1.3	1	0	0	1	1	1	0	CENP-Q,	a	CENPA-CAD	centromere	complex	subunit
V_ATPase_I	PF01496.14	gi|297527150|ref|YP_003669174.1|	-	0.22	9.3	5.1	0.26	9.0	3.6	1.1	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
Atg14	PF10186.4	gi|297527150|ref|YP_003669174.1|	-	0.47	9.3	11.9	0.2	10.5	6.6	1.5	1	1	0	1	1	1	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
WEMBL	PF05701.6	gi|297527150|ref|YP_003669174.1|	-	0.57	8.5	21.4	5	5.4	14.6	1.9	1	1	1	2	2	2	0	Weak	chloroplast	movement	under	blue	light
BCAS2	PF05700.6	gi|297527150|ref|YP_003669174.1|	-	0.59	9.5	11.1	3.1	7.1	3.1	2.6	1	1	1	2	2	2	0	Breast	carcinoma	amplified	sequence	2	(BCAS2)
DNA_primase_lrg	PF04104.9	gi|297527150|ref|YP_003669174.1|	-	1.1	8.5	5.4	2.4	7.3	3.8	1.7	1	1	0	1	1	1	0	Eukaryotic	and	archaeal	DNA	primase,	large	subunit
ISG65-75	PF11727.3	gi|297527150|ref|YP_003669174.1|	-	1.6	7.6	12.5	5	6.0	3.9	2.1	1	1	0	2	2	2	0	Invariant	surface	glycoprotein
Nsp1_C	PF05064.8	gi|297527150|ref|YP_003669174.1|	-	2.1	8.0	8.2	0.47	10.1	0.8	2.7	3	0	0	3	3	3	0	Nsp1-like	C-terminal	region
Fib_alpha	PF08702.5	gi|297527150|ref|YP_003669174.1|	-	2.6	8.1	8.7	2	8.5	1.9	2.1	1	1	1	2	2	2	0	Fibrinogen	alpha/beta	chain	family
FliJ	PF02050.11	gi|297527150|ref|YP_003669174.1|	-	4.7	7.2	16.9	11	6.0	1.4	2.6	2	1	0	2	2	2	0	Flagellar	FliJ	protein
DUF1129	PF06570.6	gi|297527151|ref|YP_003669175.1|	-	0.83	8.9	4.1	0.9	8.8	2.8	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1129)
Apq12	PF12716.2	gi|297527151|ref|YP_003669175.1|	-	1.5	8.5	6.0	0.41	10.3	1.7	1.9	1	1	1	2	2	2	0	Nuclear	pore	assembly	and	biogenesis
Enolase_C	PF00113.17	gi|297527152|ref|YP_003669176.1|	-	1.9e-118	394.7	0.0	2.7e-118	394.2	0.0	1.1	1	0	0	1	1	1	1	Enolase,	C-terminal	TIM	barrel	domain
Enolase_N	PF03952.11	gi|297527152|ref|YP_003669176.1|	-	2.7e-56	189.1	2.1	5e-56	188.2	0.7	1.9	2	0	0	2	2	2	1	Enolase,	N-terminal	domain
MR_MLE	PF01188.16	gi|297527152|ref|YP_003669176.1|	-	0.00019	21.9	0.0	0.00045	20.6	0.0	1.7	1	0	0	1	1	1	1	Mandelate	racemase	/	muconate	lactonizing	enzyme,	C-terminal	domain
MR_MLE_C	PF13378.1	gi|297527152|ref|YP_003669176.1|	-	0.0096	15.8	0.0	0.028	14.3	0.0	1.8	1	0	0	1	1	1	1	Enolase	C-terminal	domain-like
DUF2648	PF10855.3	gi|297527153|ref|YP_003669177.1|	-	0.071	12.5	0.0	0.12	11.7	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2648)
HypA	PF01155.14	gi|297527154|ref|YP_003669178.1|	-	0.0021	17.6	1.2	0.17	11.6	0.0	2.6	2	1	1	3	3	3	1	Hydrogenase	expression/synthesis	hypA	family
Zn_Tnp_IS1595	PF12760.2	gi|297527154|ref|YP_003669178.1|	-	0.003	17.3	1.5	0.013	15.2	1.0	1.9	1	1	0	1	1	1	1	Transposase	zinc-ribbon	domain
TFIIS_C	PF01096.13	gi|297527154|ref|YP_003669178.1|	-	0.0053	16.3	1.6	1.1	8.9	0.3	2.2	2	0	0	2	2	2	2	Transcription	factor	S-II	(TFIIS)
Zn-ribbon_8	PF09723.5	gi|297527154|ref|YP_003669178.1|	-	0.011	15.6	1.1	0.19	11.7	0.1	2.2	2	0	0	2	2	2	0	Zinc	ribbon	domain
Lar_restr_allev	PF14354.1	gi|297527154|ref|YP_003669178.1|	-	0.024	14.9	0.0	0.034	14.4	0.0	1.4	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
zf-ZPR1	PF03367.8	gi|297527154|ref|YP_003669178.1|	-	0.029	13.5	0.8	0.088	11.9	0.5	1.8	1	1	0	1	1	1	0	ZPR1	zinc-finger	domain
zf-ribbon_3	PF13248.1	gi|297527154|ref|YP_003669178.1|	-	0.047	12.9	1.1	0.99	8.7	0.0	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
UPF0547	PF10571.4	gi|297527154|ref|YP_003669178.1|	-	0.048	13.3	2.7	2.8	7.7	0.0	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
TF_Zn_Ribbon	PF08271.7	gi|297527154|ref|YP_003669178.1|	-	0.061	12.6	0.8	0.35	10.2	0.0	2.2	2	0	0	2	2	2	0	TFIIB	zinc-binding
Ribosomal_L37e	PF01907.14	gi|297527154|ref|YP_003669178.1|	-	0.074	12.8	1.8	5.8	6.7	0.0	2.3	2	0	0	2	2	2	0	Ribosomal	protein	L37e
PhnA_Zn_Ribbon	PF08274.7	gi|297527154|ref|YP_003669178.1|	-	0.089	12.5	0.1	1.2	9.0	0.1	2.1	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
zinc_ribbon_5	PF13719.1	gi|297527154|ref|YP_003669178.1|	-	0.095	12.2	2.7	2.4	7.8	0.1	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-NADH-PPase	PF09297.6	gi|297527154|ref|YP_003669178.1|	-	0.11	12.0	1.6	1.4	8.4	0.0	2.2	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
Trm112p	PF03966.11	gi|297527154|ref|YP_003669178.1|	-	0.12	12.6	0.6	2	8.8	0.4	2.2	1	1	1	2	2	2	0	Trm112p-like	protein
A2L_zn_ribbon	PF08792.5	gi|297527154|ref|YP_003669178.1|	-	0.15	11.5	1.6	0.64	9.5	0.1	2.1	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
zinc_ribbon_4	PF13717.1	gi|297527154|ref|YP_003669178.1|	-	0.16	11.6	3.2	2.7	7.7	0.1	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
DNA_RNApol_7kD	PF03604.8	gi|297527154|ref|YP_003669178.1|	-	0.17	11.4	2.5	0.86	9.1	0.2	2.3	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
OrfB_Zn_ribbon	PF07282.6	gi|297527154|ref|YP_003669178.1|	-	0.17	11.5	0.6	10	5.8	0.0	2.3	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
Elf1	PF05129.8	gi|297527154|ref|YP_003669178.1|	-	0.18	11.5	0.2	0.18	11.5	0.1	1.8	2	1	0	2	2	1	0	Transcription	elongation	factor	Elf1	like
zinc_ribbon_2	PF13240.1	gi|297527154|ref|YP_003669178.1|	-	0.27	10.7	2.5	3.4	7.2	0.1	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-ISL3	PF14690.1	gi|297527154|ref|YP_003669178.1|	-	0.35	10.9	0.0	0.35	10.9	0.0	2.4	2	1	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
DUF35_N	PF12172.3	gi|297527154|ref|YP_003669178.1|	-	0.36	10.8	2.9	0.69	9.9	0.1	2.2	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-FPG_IleRS	PF06827.9	gi|297527154|ref|YP_003669178.1|	-	0.71	9.5	0.1	0.71	9.5	0.1	2.9	3	0	0	3	3	3	0	Zinc	finger	found	in	FPG	and	IleRS
Rubredoxin	PF00301.15	gi|297527154|ref|YP_003669178.1|	-	0.8	9.6	2.6	21	5.0	0.1	2.3	2	0	0	2	2	2	0	Rubredoxin
Zn_ribbon_recom	PF13408.1	gi|297527154|ref|YP_003669178.1|	-	1.3	9.2	5.4	10	6.4	0.0	2.3	2	1	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
Peptidase_S24	PF00717.18	gi|297527155|ref|YP_003669179.1|	-	2e-07	30.5	0.3	3.8e-07	29.6	0.2	1.5	1	0	0	1	1	1	1	Peptidase	S24-like
Topoisom_bac	PF01131.15	gi|297527156|ref|YP_003669180.1|	-	1.3e-104	350.2	0.0	2.3e-104	349.4	0.0	1.4	1	0	0	1	1	1	1	DNA	topoisomerase
Toprim	PF01751.17	gi|297527156|ref|YP_003669180.1|	-	1.9e-10	40.5	0.1	2.1e-09	37.2	0.0	2.4	2	0	0	2	2	2	1	Toprim	domain
Tic22	PF04278.7	gi|297527156|ref|YP_003669180.1|	-	0.12	11.5	0.0	0.25	10.5	0.0	1.4	1	0	0	1	1	1	0	Tic22-like	family
Peptidase_M50	PF02163.17	gi|297527157|ref|YP_003669181.1|	-	2.8e-14	52.5	11.9	2.8e-14	52.5	5.0	2.9	2	1	0	2	2	2	1	Peptidase	family	M50
RNA_pol_Rpb6	PF01192.17	gi|297527158|ref|YP_003669182.1|	-	5.7e-15	54.7	0.0	9.3e-15	54.1	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb6
Cpn60_TCP1	PF00118.19	gi|297527159|ref|YP_003669183.1|	-	3.9e-169	563.3	12.6	4.4e-169	563.1	8.7	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
AAA_5	PF07728.9	gi|297527159|ref|YP_003669183.1|	-	0.099	12.3	0.0	0.3	10.8	0.0	1.9	1	0	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
RPAP3_C	PF13877.1	gi|297527160|ref|YP_003669184.1|	-	0.038	13.9	0.9	3.8	7.5	0.1	2.2	1	1	1	2	2	2	0	Potential	Monad-binding	region	of	RPAP3
DUF1016	PF06250.6	gi|297527160|ref|YP_003669184.1|	-	0.047	12.6	0.3	0.053	12.4	0.2	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1016)
Cbl_N	PF02262.11	gi|297527160|ref|YP_003669184.1|	-	0.051	13.2	0.2	0.11	12.2	0.2	1.6	1	1	0	1	1	1	0	CBL	proto-oncogene	N-terminal	domain	1
RIC1	PF07064.8	gi|297527160|ref|YP_003669184.1|	-	0.052	13.0	0.1	0.12	11.7	0.0	1.5	1	1	1	2	2	2	0	RIC1
MetW	PF07021.7	gi|297527160|ref|YP_003669184.1|	-	0.086	12.2	0.1	0.12	11.7	0.0	1.2	1	0	0	1	1	1	0	Methionine	biosynthesis	protein	MetW
Telomere_reg-2	PF10193.4	gi|297527160|ref|YP_003669184.1|	-	0.14	12.4	1.4	0.21	11.8	0.1	1.8	2	1	0	2	2	2	0	Telomere	length	regulation	protein
Thioredoxin	PF00085.15	gi|297527161|ref|YP_003669185.1|	-	4.2e-05	23.1	0.0	4.7e-05	22.9	0.0	1.0	1	0	0	1	1	1	1	Thioredoxin
Thioredoxin_6	PF13848.1	gi|297527161|ref|YP_003669185.1|	-	0.06	13.1	0.1	0.076	12.8	0.1	1.1	1	0	0	1	1	1	0	Thioredoxin-like	domain
Zn-ribbon_8	PF09723.5	gi|297527163|ref|YP_003669187.1|	-	0.06	13.3	1.1	1.5	8.8	0.0	2.4	2	0	0	2	2	2	0	Zinc	ribbon	domain
DUF4248	PF14053.1	gi|297527163|ref|YP_003669187.1|	-	0.066	12.7	0.0	0.17	11.4	0.0	1.7	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4248)
Tom37_C	PF11801.3	gi|297527163|ref|YP_003669187.1|	-	0.36	10.6	2.4	0.59	9.9	1.5	1.5	1	1	0	1	1	1	0	Tom37	C-terminal	domain
DNA_RNApol_7kD	PF03604.8	gi|297527163|ref|YP_003669187.1|	-	0.83	9.1	0.1	0.83	9.1	0.0	3.0	3	0	0	3	3	3	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Zn_Tnp_IS1595	PF12760.2	gi|297527163|ref|YP_003669187.1|	-	2.4	8.0	4.3	5.7	6.8	3.0	1.6	1	1	0	1	1	1	0	Transposase	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|297527163|ref|YP_003669187.1|	-	2.5	7.4	5.2	19	4.6	3.7	2.0	1	1	1	2	2	2	0	zinc-ribbon	domain
GatB_Yqey	PF02637.13	gi|297527164|ref|YP_003669188.1|	-	0.03	14.0	0.0	0.041	13.6	0.0	1.2	1	0	0	1	1	1	0	GatB	domain
DnaA_N	PF11638.3	gi|297527164|ref|YP_003669188.1|	-	0.04	13.4	0.2	0.55	9.8	0.0	2.4	1	1	1	2	2	2	0	DnaA	N-terminal	domain
ARL2_Bind_BART	PF11527.3	gi|297527164|ref|YP_003669188.1|	-	0.052	13.3	0.1	0.091	12.5	0.1	1.5	1	1	0	1	1	1	0	The	ARF-like	2	binding	protein	BART
KH_5	PF13184.1	gi|297527164|ref|YP_003669188.1|	-	0.17	11.7	0.3	0.27	11.0	0.2	1.3	1	0	0	1	1	1	0	NusA-like	KH	domain
FGF	PF00167.13	gi|297527165|ref|YP_003669189.1|	-	0.024	14.3	0.1	0.029	14.1	0.0	1.1	1	0	0	1	1	1	0	Fibroblast	growth	factor
Metallophos	PF00149.23	gi|297527166|ref|YP_003669190.1|	-	2.8e-26	92.1	0.1	4.1e-26	91.6	0.0	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase
Metallophos_2	PF12850.2	gi|297527166|ref|YP_003669190.1|	-	1.5e-06	28.1	0.0	2e-06	27.7	0.0	1.2	1	0	0	1	1	1	1	Calcineurin-like	phosphoesterase	superfamily	domain
tRNA_m1G_MT	PF01746.16	gi|297527166|ref|YP_003669190.1|	-	0.012	15.1	0.0	0.025	14.1	0.0	1.5	1	0	0	1	1	1	0	tRNA	(Guanine-1)-methyltransferase
Dimeth_Pyl	PF09505.5	gi|297527166|ref|YP_003669190.1|	-	0.066	11.4	0.0	0.098	10.9	0.0	1.3	1	0	0	1	1	1	0	Dimethylamine	methyltransferase	(Dimeth_PyL)
Myb_DNA-bind_4	PF13837.1	gi|297527168|ref|YP_003669192.1|	-	0.023	14.8	0.3	0.23	11.6	0.1	2.1	1	1	1	2	2	2	0	Myb/SANT-like	DNA-binding	domain
HWE_HK	PF07536.9	gi|297527168|ref|YP_003669192.1|	-	0.11	12.9	0.0	0.17	12.3	0.0	1.3	1	0	0	1	1	1	0	HWE	histidine	kinase
GatB_N	PF02934.10	gi|297527169|ref|YP_003669193.1|	-	1.9e-85	286.2	0.0	2.6e-85	285.8	0.0	1.1	1	0	0	1	1	1	1	GatB/GatE	catalytic	domain
GatB_Yqey	PF02637.13	gi|297527169|ref|YP_003669193.1|	-	4.1e-27	94.7	5.7	4.1e-27	94.7	3.9	1.9	2	0	0	2	2	2	1	GatB	domain
GAD	PF02938.9	gi|297527169|ref|YP_003669193.1|	-	2.6e-18	65.9	0.1	2.3e-17	62.9	0.0	2.6	2	0	0	2	2	2	1	GAD	domain
YqeY	PF09424.5	gi|297527169|ref|YP_003669193.1|	-	0.00012	21.9	6.0	0.00068	19.5	4.2	2.2	1	1	0	1	1	1	1	Yqey-like	protein
Hydantoinase_B	PF02538.9	gi|297527169|ref|YP_003669193.1|	-	0.059	11.5	0.5	0.093	10.9	0.3	1.2	1	0	0	1	1	1	0	Hydantoinase	B/oxoprolinase
Asparaginase	PF00710.15	gi|297527170|ref|YP_003669194.1|	-	1e-92	310.3	0.0	1.3e-92	310.0	0.0	1.1	1	0	0	1	1	1	1	Asparaginase
Peripla_BP_4	PF13407.1	gi|297527170|ref|YP_003669194.1|	-	0.0092	15.3	0.1	2.4	7.4	0.0	2.2	2	0	0	2	2	2	2	Periplasmic	binding	protein	domain
Histone	PF00125.19	gi|297527170|ref|YP_003669194.1|	-	0.075	13.1	0.0	0.27	11.4	0.0	1.9	1	0	0	1	1	1	0	Core	histone	H2A/H2B/H3/H4
Ribosomal_S30	PF04758.9	gi|297527171|ref|YP_003669195.1|	-	1.6e-13	50.1	1.3	2e-13	49.8	0.9	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S30
Nop	PF01798.13	gi|297527172|ref|YP_003669196.1|	-	4.5e-54	181.8	0.1	7.2e-54	181.1	0.1	1.3	1	0	0	1	1	1	1	Putative	snoRNA	binding	domain
NOSIC	PF08060.8	gi|297527172|ref|YP_003669196.1|	-	3.1e-23	81.3	0.3	7e-23	80.1	0.2	1.6	1	0	0	1	1	1	1	NOSIC	(NUC001)	domain
HHH_5	PF14520.1	gi|297527172|ref|YP_003669196.1|	-	0.36	11.0	4.2	4.5	7.5	0.5	3.6	3	1	0	3	3	3	0	Helix-hairpin-helix	domain
CRF	PF00473.12	gi|297527172|ref|YP_003669196.1|	-	1.7	8.8	3.8	0.78	9.8	0.4	2.0	2	0	0	2	2	2	0	Corticotropin-releasing	factor	family
Fibrillarin	PF01269.12	gi|297527173|ref|YP_003669197.1|	-	7e-100	332.6	0.0	7.9e-100	332.4	0.0	1.0	1	0	0	1	1	1	1	Fibrillarin
GCD14	PF08704.5	gi|297527173|ref|YP_003669197.1|	-	0.0044	16.5	0.0	0.0085	15.6	0.0	1.5	1	1	0	1	1	1	1	tRNA	methyltransferase	complex	GCD14	subunit
PCMT	PF01135.14	gi|297527173|ref|YP_003669197.1|	-	0.013	15.0	0.0	0.021	14.3	0.0	1.3	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
HTH_3	PF01381.17	gi|297527174|ref|YP_003669198.1|	-	2e-13	49.9	0.1	1.1e-12	47.6	0.0	2.3	3	0	0	3	3	3	1	Helix-turn-helix
HTH_19	PF12844.2	gi|297527174|ref|YP_003669198.1|	-	7.6e-13	48.3	0.2	7.8e-12	45.0	0.0	2.7	3	0	0	3	3	3	1	Helix-turn-helix	domain
HTH_31	PF13560.1	gi|297527174|ref|YP_003669198.1|	-	1.1e-06	28.7	0.0	2.5e-06	27.6	0.0	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_26	PF13443.1	gi|297527174|ref|YP_003669198.1|	-	0.00061	19.9	0.0	0.0038	17.3	0.0	2.4	3	0	0	3	3	3	1	Cro/C1-type	HTH	DNA-binding	domain
HTH_11	PF08279.7	gi|297527174|ref|YP_003669198.1|	-	0.0017	17.9	0.0	0.0072	15.9	0.0	2.1	2	0	0	2	2	2	1	HTH	domain
UPF0180	PF03698.8	gi|297527174|ref|YP_003669198.1|	-	0.013	15.3	0.1	0.092	12.6	0.0	2.4	1	1	0	2	2	2	0	Uncharacterised	protein	family	(UPF0180)
HTH_25	PF13413.1	gi|297527174|ref|YP_003669198.1|	-	0.069	12.7	0.0	0.23	11.0	0.0	2.0	2	0	0	2	2	2	0	Helix-turn-helix	domain
TetR_N	PF00440.18	gi|297527174|ref|YP_003669198.1|	-	0.14	11.8	0.0	0.29	10.7	0.0	1.5	1	0	0	1	1	1	0	Bacterial	regulatory	proteins,	tetR	family
AAA_4	PF04326.9	gi|297527174|ref|YP_003669198.1|	-	2.2	8.4	10.1	1.7	8.8	2.4	2.5	1	1	1	2	2	2	0	Divergent	AAA	domain
NTPase_1	PF03266.10	gi|297527175|ref|YP_003669199.1|	-	9.7e-52	175.0	0.4	1.2e-51	174.7	0.3	1.0	1	0	0	1	1	1	1	NTPase
AAA	PF00004.24	gi|297527175|ref|YP_003669199.1|	-	1.1e-06	28.8	0.1	1.6e-06	28.3	0.0	1.3	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
MMR_HSR1	PF01926.18	gi|297527175|ref|YP_003669199.1|	-	7.9e-05	22.5	2.5	0.00016	21.6	1.7	1.7	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
AAA_10	PF12846.2	gi|297527175|ref|YP_003669199.1|	-	0.00016	21.2	0.1	0.00031	20.2	0.1	1.6	1	1	0	1	1	1	1	AAA-like	domain
ArgK	PF03308.11	gi|297527175|ref|YP_003669199.1|	-	0.0003	19.6	0.0	0.00055	18.8	0.0	1.4	1	0	0	1	1	1	1	ArgK	protein
AAA_22	PF13401.1	gi|297527175|ref|YP_003669199.1|	-	0.00035	20.7	0.1	0.00098	19.2	0.1	1.8	1	1	0	1	1	1	1	AAA	domain
AAA_14	PF13173.1	gi|297527175|ref|YP_003669199.1|	-	0.00076	19.3	0.9	0.0059	16.5	0.6	2.4	1	1	0	1	1	1	1	AAA	domain
MobB	PF03205.9	gi|297527175|ref|YP_003669199.1|	-	0.0009	18.9	0.1	0.0017	18.0	0.1	1.5	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_17	PF13207.1	gi|297527175|ref|YP_003669199.1|	-	0.0017	19.1	0.3	0.0029	18.4	0.2	1.6	1	1	0	1	1	1	1	AAA	domain
NACHT	PF05729.7	gi|297527175|ref|YP_003669199.1|	-	0.0028	17.3	0.1	0.0067	16.0	0.0	1.7	2	0	0	2	2	2	1	NACHT	domain
AAA_16	PF13191.1	gi|297527175|ref|YP_003669199.1|	-	0.0029	17.6	0.0	0.0057	16.6	0.0	1.7	1	1	0	1	1	1	1	AAA	ATPase	domain
cobW	PF02492.14	gi|297527175|ref|YP_003669199.1|	-	0.004	16.6	0.7	0.0057	16.1	0.5	1.6	1	1	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
ABC_tran	PF00005.22	gi|297527175|ref|YP_003669199.1|	-	0.0041	17.4	1.2	0.0051	17.1	0.7	1.4	1	1	0	1	1	1	1	ABC	transporter
Arch_ATPase	PF01637.13	gi|297527175|ref|YP_003669199.1|	-	0.0079	15.9	3.4	0.0096	15.6	0.4	2.2	1	1	1	2	2	2	1	Archaeal	ATPase
RNA_helicase	PF00910.17	gi|297527175|ref|YP_003669199.1|	-	0.013	15.6	0.0	0.026	14.6	0.0	1.6	1	0	0	1	1	1	0	RNA	helicase
DUF258	PF03193.11	gi|297527175|ref|YP_003669199.1|	-	0.018	14.1	0.0	0.026	13.7	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
AAA_29	PF13555.1	gi|297527175|ref|YP_003669199.1|	-	0.023	14.2	0.1	0.037	13.5	0.0	1.3	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_18	PF13238.1	gi|297527175|ref|YP_003669199.1|	-	0.029	14.6	0.9	0.072	13.3	0.6	1.8	1	1	0	1	1	1	0	AAA	domain
NB-ARC	PF00931.17	gi|297527175|ref|YP_003669199.1|	-	0.036	12.9	0.2	0.04	12.7	0.1	1.6	1	1	0	1	1	1	0	NB-ARC	domain
DUF2075	PF09848.4	gi|297527175|ref|YP_003669199.1|	-	0.042	12.8	0.0	0.056	12.4	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
FeoB_N	PF02421.13	gi|297527175|ref|YP_003669199.1|	-	0.054	12.7	0.1	0.098	11.9	0.0	1.5	1	0	0	1	1	1	0	Ferrous	iron	transport	protein	B
AAA_5	PF07728.9	gi|297527175|ref|YP_003669199.1|	-	0.075	12.7	0.1	1.5	8.5	0.0	2.3	2	0	0	2	2	2	0	AAA	domain	(dynein-related	subfamily)
ATP-synt_ab	PF00006.20	gi|297527175|ref|YP_003669199.1|	-	0.076	12.5	0.0	0.076	12.5	0.0	1.2	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
AAA_23	PF13476.1	gi|297527175|ref|YP_003669199.1|	-	1.8	8.8	5.4	4.1	7.6	3.8	1.6	1	1	0	1	1	1	0	AAA	domain
TRM	PF02005.11	gi|297527176|ref|YP_003669200.1|	-	2.3e-74	250.5	0.0	2.5e-74	250.4	0.0	1.0	1	0	0	1	1	1	1	N2,N2-dimethylguanosine	tRNA	methyltransferase
Met_10	PF02475.11	gi|297527176|ref|YP_003669200.1|	-	0.0069	15.9	0.0	0.01	15.4	0.0	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
RNA_pol_Rpc34	PF05158.7	gi|297527177|ref|YP_003669201.1|	-	1.1e-07	31.4	0.9	6.8e-05	22.2	0.1	2.0	1	1	1	2	2	2	2	RNA	polymerase	Rpc34	subunit
MarR	PF01047.17	gi|297527177|ref|YP_003669201.1|	-	0.00015	21.3	0.0	0.00027	20.6	0.0	1.4	1	0	0	1	1	1	1	MarR	family
HTH_24	PF13412.1	gi|297527177|ref|YP_003669201.1|	-	0.0003	20.1	0.0	0.00059	19.1	0.0	1.5	1	0	0	1	1	1	1	Winged	helix-turn-helix	DNA-binding
TrmB	PF01978.14	gi|297527177|ref|YP_003669201.1|	-	0.00052	19.6	0.0	0.00094	18.8	0.0	1.4	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
MarR_2	PF12802.2	gi|297527177|ref|YP_003669201.1|	-	0.003	17.1	0.0	0.0049	16.4	0.0	1.3	1	0	0	1	1	1	1	MarR	family
B-block_TFIIIC	PF04182.7	gi|297527177|ref|YP_003669201.1|	-	0.0043	16.8	0.0	0.0054	16.5	0.0	1.3	1	0	0	1	1	1	1	B-block	binding	subunit	of	TFIIIC
HTH_36	PF13730.1	gi|297527177|ref|YP_003669201.1|	-	0.017	15.2	0.3	0.031	14.4	0.2	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_27	PF13463.1	gi|297527177|ref|YP_003669201.1|	-	0.027	14.7	0.0	0.058	13.7	0.0	1.6	1	0	0	1	1	1	0	Winged	helix	DNA-binding	domain
HTH_11	PF08279.7	gi|297527177|ref|YP_003669201.1|	-	0.056	13.1	0.0	0.089	12.4	0.0	1.4	1	0	0	1	1	1	0	HTH	domain
HTH_20	PF12840.2	gi|297527177|ref|YP_003669201.1|	-	0.069	12.9	0.0	0.18	11.6	0.0	1.7	1	0	0	1	1	1	0	Helix-turn-helix	domain
HTH_5	PF01022.15	gi|297527177|ref|YP_003669201.1|	-	0.14	11.7	0.0	0.22	11.2	0.0	1.3	1	0	0	1	1	1	0	Bacterial	regulatory	protein,	arsR	family
TFIIB	PF00382.14	gi|297527178|ref|YP_003669202.1|	-	6.1e-21	74.0	0.1	6.8e-15	54.6	0.1	2.3	2	0	0	2	2	2	2	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.7	gi|297527178|ref|YP_003669202.1|	-	1.7e-17	62.4	1.2	2.9e-17	61.6	0.8	1.4	1	0	0	1	1	1	1	TFIIB	zinc-binding
Cyclin_N	PF00134.18	gi|297527178|ref|YP_003669202.1|	-	0.00093	18.7	1.1	0.017	14.7	0.1	2.4	1	1	1	2	2	2	1	Cyclin,	N-terminal	domain
Lar_restr_allev	PF14354.1	gi|297527178|ref|YP_003669202.1|	-	0.00097	19.3	0.3	0.0019	18.4	0.2	1.4	1	0	0	1	1	1	1	Restriction	alleviation	protein	Lar
zf-ribbon_3	PF13248.1	gi|297527178|ref|YP_003669202.1|	-	0.0011	18.0	0.2	1.1	8.5	0.0	2.3	2	0	0	2	2	2	2	zinc-ribbon	domain
zf-ISL3	PF14690.1	gi|297527178|ref|YP_003669202.1|	-	0.0039	17.1	1.0	3.7	7.6	0.1	2.8	1	1	1	2	2	2	2	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Zn_Tnp_IS1595	PF12760.2	gi|297527178|ref|YP_003669202.1|	-	0.0053	16.5	1.0	0.0092	15.7	0.7	1.4	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|297527178|ref|YP_003669202.1|	-	0.012	15.0	1.4	2.6	7.6	0.1	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|297527178|ref|YP_003669202.1|	-	0.016	14.8	0.6	0.037	13.6	0.4	1.6	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
Ribosomal_S27e	PF01667.12	gi|297527178|ref|YP_003669202.1|	-	0.017	14.6	0.4	0.03	13.8	0.3	1.3	1	0	0	1	1	1	0	Ribosomal	protein	S27
DUF2296	PF10058.4	gi|297527178|ref|YP_003669202.1|	-	0.031	13.9	1.2	0.072	12.8	0.8	1.6	1	0	0	1	1	1	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
DUF4206	PF13901.1	gi|297527178|ref|YP_003669202.1|	-	0.033	13.7	0.5	0.076	12.5	0.4	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4206)
DZR	PF12773.2	gi|297527178|ref|YP_003669202.1|	-	0.053	13.3	0.2	0.094	12.5	0.2	1.3	1	0	0	1	1	1	0	Double	zinc	ribbon
RRN7	PF11781.3	gi|297527178|ref|YP_003669202.1|	-	0.07	12.6	3.5	0.14	11.6	2.4	1.5	1	1	0	1	1	1	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
Cyclin_C	PF02984.14	gi|297527178|ref|YP_003669202.1|	-	0.072	13.0	0.2	2.2	8.2	0.0	2.5	1	1	1	2	2	2	0	Cyclin,	C-terminal	domain
Zn-ribbon_8	PF09723.5	gi|297527178|ref|YP_003669202.1|	-	0.098	12.6	0.4	12	5.9	0.1	2.4	2	0	0	2	2	2	0	Zinc	ribbon	domain
A2L_zn_ribbon	PF08792.5	gi|297527178|ref|YP_003669202.1|	-	0.14	11.6	1.6	0.32	10.4	1.1	1.6	1	1	0	1	1	1	0	A2L	zinc	ribbon	domain
DNA_RNApol_7kD	PF03604.8	gi|297527178|ref|YP_003669202.1|	-	0.25	10.8	1.6	18	4.9	0.1	2.5	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
Gar1	PF04410.9	gi|297527179|ref|YP_003669203.1|	-	3.3e-06	26.6	2.0	6.4e-06	25.6	1.4	1.5	1	1	0	1	1	1	1	Gar1/Naf1	RNA	binding	region
PRC	PF05239.11	gi|297527179|ref|YP_003669203.1|	-	0.093	12.6	1.0	0.17	11.7	0.3	1.8	1	1	1	2	2	2	0	PRC-barrel	domain
SRP19	PF01922.12	gi|297527180|ref|YP_003669204.1|	-	1.1e-25	90.0	0.4	1.3e-25	89.8	0.3	1.1	1	0	0	1	1	1	1	SRP19	protein
Ribosomal_S8e	PF01201.17	gi|297527181|ref|YP_003669205.1|	-	1.2e-38	132.2	2.8	1.3e-38	132.0	2.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S8e
OrfB_Zn_ribbon	PF07282.6	gi|297527182|ref|YP_003669206.1|	-	3.3e-24	84.3	0.1	9.9e-24	82.7	0.0	1.9	2	0	0	2	2	2	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|297527182|ref|YP_003669206.1|	-	5.3e-15	55.4	6.1	5.3e-15	55.4	4.2	2.0	2	0	0	2	2	2	1	Probable	transposase
Baculo_ME53	PF06061.6	gi|297527182|ref|YP_003669206.1|	-	0.011	14.7	0.1	0.011	14.7	0.0	2.4	3	0	0	3	3	3	0	Baculoviridae	ME53
DUF3071	PF11268.3	gi|297527182|ref|YP_003669206.1|	-	0.087	12.5	0.0	0.13	12.0	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3071)
Resolvase	PF00239.16	gi|297527183|ref|YP_003669207.1|	-	3.1e-21	75.7	0.7	4.2e-21	75.2	0.5	1.2	1	0	0	1	1	1	1	Resolvase,	N	terminal	domain
HTH_17	PF12728.2	gi|297527183|ref|YP_003669207.1|	-	5.4e-13	48.9	2.9	1.1e-12	47.9	0.9	2.3	2	0	0	2	2	2	1	Helix-turn-helix	domain
MerR	PF00376.18	gi|297527183|ref|YP_003669207.1|	-	0.00012	21.5	0.7	0.00025	20.5	0.5	1.6	1	0	0	1	1	1	1	MerR	family	regulatory	protein
MerR_1	PF13411.1	gi|297527183|ref|YP_003669207.1|	-	0.0016	18.2	2.1	0.0045	16.7	0.2	2.3	2	0	0	2	2	2	1	MerR	HTH	family	regulatory	protein
HTH_23	PF13384.1	gi|297527183|ref|YP_003669207.1|	-	0.0074	15.9	0.9	0.021	14.4	0.6	1.9	1	1	0	1	1	1	1	Homeodomain-like	domain
Exc	PF07825.6	gi|297527183|ref|YP_003669207.1|	-	0.017	14.8	0.1	0.032	13.9	0.1	1.4	1	0	0	1	1	1	0	Excisionase-like	protein
DEAD	PF00270.24	gi|297527183|ref|YP_003669207.1|	-	0.049	13.1	0.0	0.084	12.3	0.0	1.4	1	1	0	1	1	1	0	DEAD/DEAH	box	helicase
HTH_3	PF01381.17	gi|297527183|ref|YP_003669207.1|	-	0.057	13.2	0.0	0.25	11.2	0.0	2.2	1	1	0	1	1	1	0	Helix-turn-helix
B12-binding	PF02310.14	gi|297527183|ref|YP_003669207.1|	-	0.12	12.2	0.0	0.74	9.6	0.0	2.0	1	1	1	2	2	2	0	B12	binding	domain
P22_Cro	PF14549.1	gi|297527183|ref|YP_003669207.1|	-	0.12	12.0	0.0	0.28	10.9	0.0	1.6	1	0	0	1	1	1	0	DNA-binding	transcriptional	regulator	Cro
LacI	PF00356.16	gi|297527183|ref|YP_003669207.1|	-	0.4	10.3	0.2	0.4	10.3	0.1	2.4	3	0	0	3	3	3	0	Bacterial	regulatory	proteins,	lacI	family
NTPase_I-T	PF01931.13	gi|297527184|ref|YP_003669208.1|	-	6.1e-07	29.3	0.0	7e-07	29.1	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF84
Prenyltransf	PF01255.14	gi|297527185|ref|YP_003669209.1|	-	6.6e-83	277.2	0.1	7.7e-83	277.0	0.0	1.0	1	0	0	1	1	1	1	Putative	undecaprenyl	diphosphate	synthase
Laminin_II	PF06009.7	gi|297527186|ref|YP_003669210.1|	-	1.1e-07	31.7	15.4	1.1e-07	31.7	10.7	4.0	1	1	3	4	4	4	2	Laminin	Domain	II
Reo_sigmaC	PF04582.7	gi|297527186|ref|YP_003669210.1|	-	5.6e-07	29.0	10.6	2.4e-05	23.6	2.8	2.3	1	1	0	2	2	2	2	Reovirus	sigma	C	capsid	protein
Laminin_I	PF06008.9	gi|297527186|ref|YP_003669210.1|	-	1.8e-06	27.4	44.1	5.6e-05	22.5	16.1	2.6	1	1	0	2	2	2	2	Laminin	Domain	I
IncA	PF04156.9	gi|297527186|ref|YP_003669210.1|	-	3.8e-06	26.6	60.8	0.11	12.0	23.4	3.2	1	1	1	2	2	2	1	IncA	protein
DUF948	PF06103.6	gi|297527186|ref|YP_003669210.1|	-	7.5e-06	25.7	25.1	0.00062	19.5	7.7	4.7	1	1	4	6	6	5	2	Bacterial	protein	of	unknown	function	(DUF948)
APG6	PF04111.7	gi|297527186|ref|YP_003669210.1|	-	1.2e-05	24.4	49.3	0.0041	16.2	9.7	2.3	1	1	0	2	2	2	2	Autophagy	protein	Apg6
MbeD_MobD	PF04899.7	gi|297527186|ref|YP_003669210.1|	-	3.8e-05	23.4	9.3	0.23	11.4	0.1	4.6	2	2	1	3	3	3	2	MbeD/MobD	like
TBPIP	PF07106.8	gi|297527186|ref|YP_003669210.1|	-	4.3e-05	23.1	63.7	0.037	13.5	9.6	3.5	1	1	1	3	3	3	3	Tat	binding	protein	1(TBP-1)-interacting	protein	(TBPIP)
NPV_P10	PF05531.7	gi|297527186|ref|YP_003669210.1|	-	6.1e-05	23.1	30.7	0.00014	22.0	5.4	4.9	2	2	3	5	5	4	1	Nucleopolyhedrovirus	P10	protein
ALIX_LYPXL_bnd	PF13949.1	gi|297527186|ref|YP_003669210.1|	-	0.00014	20.9	53.0	0.014	14.4	15.4	3.0	1	1	1	2	2	2	2	ALIX	V-shaped	domain	binding	to	HIV
AAA_13	PF13166.1	gi|297527186|ref|YP_003669210.1|	-	0.00022	19.8	46.4	0.00022	19.8	32.2	2.3	1	1	1	2	2	2	1	AAA	domain
Filament	PF00038.16	gi|297527186|ref|YP_003669210.1|	-	0.00027	20.5	45.6	0.0078	15.7	7.2	3.0	1	1	0	2	2	2	2	Intermediate	filament	protein
Mnd1	PF03962.10	gi|297527186|ref|YP_003669210.1|	-	0.00033	20.3	50.3	0.0041	16.8	6.7	3.6	1	1	2	3	3	3	2	Mnd1	family
Baculo_PEP_C	PF04513.7	gi|297527186|ref|YP_003669210.1|	-	0.00084	19.1	30.9	0.01	15.6	13.9	3.7	1	1	3	4	4	4	2	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
DUF3584	PF12128.3	gi|297527186|ref|YP_003669210.1|	-	0.0017	15.8	44.0	0.0023	15.3	30.5	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3584)
DUF904	PF06005.7	gi|297527186|ref|YP_003669210.1|	-	0.0031	17.7	18.5	0.0031	17.7	12.8	5.6	1	1	5	6	6	4	2	Protein	of	unknown	function	(DUF904)
Syntaxin-6_N	PF09177.6	gi|297527186|ref|YP_003669210.1|	-	0.0035	17.7	9.8	0.0035	17.7	6.8	5.2	2	2	1	3	3	2	1	Syntaxin	6,	N-terminal
TMF_DNA_bd	PF12329.3	gi|297527186|ref|YP_003669210.1|	-	0.0036	17.0	10.4	0.0036	17.0	7.2	6.6	2	2	5	7	7	7	2	TATA	element	modulatory	factor	1	DNA	binding
Med9	PF07544.8	gi|297527186|ref|YP_003669210.1|	-	0.0038	16.9	9.8	0.0038	16.9	6.8	5.3	1	1	4	5	5	5	2	RNA	polymerase	II	transcription	mediator	complex	subunit	9
Med4	PF10018.4	gi|297527186|ref|YP_003669210.1|	-	0.004	16.5	14.8	0.004	16.5	10.3	3.6	2	1	1	3	3	3	1	Vitamin-D-receptor	interacting	Mediator	subunit	4
FlaC_arch	PF05377.6	gi|297527186|ref|YP_003669210.1|	-	0.005	16.7	9.8	0.005	16.7	6.8	6.5	1	1	5	6	6	6	2	Flagella	accessory	protein	C	(FlaC)
Syntaxin_2	PF14523.1	gi|297527186|ref|YP_003669210.1|	-	0.0059	16.6	18.2	0.0059	16.6	12.6	4.1	1	1	3	4	4	3	1	Syntaxin-like	protein
DUF4140	PF13600.1	gi|297527186|ref|YP_003669210.1|	-	0.0068	16.8	4.7	0.0068	16.8	3.3	5.7	2	2	2	6	6	5	1	N-terminal	domain	of	unknown	function	(DUF4140)
TarH	PF02203.10	gi|297527186|ref|YP_003669210.1|	-	0.0087	15.9	10.6	0.057	13.2	0.5	2.4	2	0	0	2	2	2	1	Tar	ligand	binding	domain	homologue
ApoO	PF09769.4	gi|297527186|ref|YP_003669210.1|	-	0.015	14.9	2.3	0.015	14.9	1.6	2.1	2	1	0	2	2	2	0	Apolipoprotein	O
LPP	PF04728.8	gi|297527186|ref|YP_003669210.1|	-	0.016	14.9	6.6	2.6	7.9	0.0	3.9	2	1	1	3	3	3	0	Lipoprotein	leucine-zipper
STAT_alpha	PF01017.15	gi|297527186|ref|YP_003669210.1|	-	0.017	14.8	1.5	0.017	14.8	1.0	4.0	1	1	3	4	4	3	0	STAT	protein,	all-alpha	domain
ADIP	PF11559.3	gi|297527186|ref|YP_003669210.1|	-	0.02	14.8	60.3	0.021	14.7	24.0	3.6	1	1	1	3	3	3	0	Afadin-	and	alpha	-actinin-Binding
Atg14	PF10186.4	gi|297527186|ref|YP_003669210.1|	-	0.021	13.7	64.6	0.0052	15.7	24.1	3.3	1	1	1	2	2	2	0	UV	radiation	resistance	protein	and	autophagy-related	subunit	14
Spc7	PF08317.6	gi|297527186|ref|YP_003669210.1|	-	0.034	12.8	65.9	0.026	13.2	21.5	3.7	1	1	3	4	4	4	0	Spc7	kinetochore	protein
WXG100	PF06013.7	gi|297527186|ref|YP_003669210.1|	-	0.04	13.9	15.8	0.037	14.0	2.0	5.2	5	1	0	5	5	4	0	Proteins	of	100	residues	with	WXG
COG5	PF10392.4	gi|297527186|ref|YP_003669210.1|	-	0.053	13.4	36.8	0.076	12.9	2.4	4.5	1	1	3	4	4	4	0	Golgi	transport	complex	subunit	5
HisKA_3	PF07730.8	gi|297527186|ref|YP_003669210.1|	-	0.083	13.2	11.9	0.8	10.1	0.8	4.7	3	2	0	3	3	3	0	Histidine	kinase
APG17	PF04108.7	gi|297527186|ref|YP_003669210.1|	-	0.084	11.6	33.0	0.011	14.6	11.1	2.9	1	1	1	2	2	2	0	Autophagy	protein	Apg17
TMP_2	PF06791.8	gi|297527186|ref|YP_003669210.1|	-	0.092	12.3	1.1	0.3	10.6	0.7	1.9	1	1	0	1	1	1	0	Prophage	tail	length	tape	measure	protein
DUF2612	PF11041.3	gi|297527186|ref|YP_003669210.1|	-	0.14	11.7	2.1	1.5	8.3	0.0	2.8	1	1	1	3	3	3	0	Protein	of	unknown	function	(DUF2612)
HsbA	PF12296.3	gi|297527186|ref|YP_003669210.1|	-	0.2	11.4	17.4	1.9	8.3	4.0	4.7	2	2	1	3	3	3	0	Hydrophobic	surface	binding	protein	A
MCPsignal	PF00015.16	gi|297527186|ref|YP_003669210.1|	-	0.23	10.9	19.3	0.37	10.2	9.7	2.9	1	1	2	3	3	3	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
Rop-like	PF05082.8	gi|297527186|ref|YP_003669210.1|	-	0.23	10.9	9.4	0.061	12.8	1.1	3.7	2	1	0	2	2	2	0	Rop-like
DUF972	PF06156.8	gi|297527186|ref|YP_003669210.1|	-	0.24	11.7	52.6	0.53	10.6	6.6	4.8	1	1	3	4	4	4	0	Protein	of	unknown	function	(DUF972)
Surfac_D-trimer	PF09006.6	gi|297527186|ref|YP_003669210.1|	-	0.27	10.9	9.8	0.29	10.8	0.2	4.7	5	1	1	6	6	3	0	Lung	surfactant	protein	D	coiled-coil	trimerisation
MscS_porin	PF12795.2	gi|297527186|ref|YP_003669210.1|	-	0.28	10.4	49.2	1.3	8.2	18.5	2.9	1	1	1	2	2	2	0	Mechanosensitive	ion	channel	porin	domain
ATG16	PF08614.6	gi|297527186|ref|YP_003669210.1|	-	0.35	10.6	61.3	0.035	13.9	6.6	4.1	1	1	3	4	4	3	0	Autophagy	protein	16	(ATG16)
Phage_GPO	PF05929.6	gi|297527186|ref|YP_003669210.1|	-	0.47	9.6	18.8	0.054	12.7	5.7	2.4	2	0	0	2	2	2	0	Phage	capsid	scaffolding	protein	(GPO)	serine	peptidase
PilJ	PF13675.1	gi|297527186|ref|YP_003669210.1|	-	0.54	10.5	12.7	0.74	10.1	2.4	3.6	1	1	2	3	3	3	0	Type	IV	pili	methyl-accepting	chemotaxis	transducer	N-term
BLOC1_2	PF10046.4	gi|297527186|ref|YP_003669210.1|	-	0.56	10.3	44.7	0.17	12.0	8.0	4.8	1	1	2	4	4	4	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
DUF2935	PF11155.3	gi|297527186|ref|YP_003669210.1|	-	0.6	10.2	29.0	0.03	14.4	5.1	3.7	1	1	2	3	3	2	0	Domain	of	unknown	function	(DUF2935)
DUF869	PF05911.6	gi|297527186|ref|YP_003669210.1|	-	0.75	7.9	46.5	4.9	5.2	32.2	2.0	1	1	0	1	1	1	0	Plant	protein	of	unknown	function	(DUF869)
Spc24	PF08286.6	gi|297527186|ref|YP_003669210.1|	-	0.8	9.4	46.9	0.046	13.4	6.1	4.7	1	1	3	5	5	5	0	Spc24	subunit	of	Ndc80
DUF1664	PF07889.7	gi|297527186|ref|YP_003669210.1|	-	0.82	9.4	43.8	0.75	9.6	6.1	4.5	1	1	3	4	4	4	0	Protein	of	unknown	function	(DUF1664)
EAP30	PF04157.11	gi|297527186|ref|YP_003669210.1|	-	1	8.4	29.4	0.72	8.9	4.6	4.0	2	1	2	4	4	4	0	EAP30/Vps36	family
TMF_TATA_bd	PF12325.3	gi|297527186|ref|YP_003669210.1|	-	1.3	8.7	58.4	0.36	10.5	14.2	4.1	1	1	3	4	4	4	0	TATA	element	modulatory	factor	1	TATA	binding
Seryl_tRNA_N	PF02403.17	gi|297527186|ref|YP_003669210.1|	-	1.5	8.8	66.1	0.26	11.3	17.6	4.5	1	1	3	4	4	3	0	Seryl-tRNA	synthetase	N-terminal	domain
Spectrin	PF00435.16	gi|297527186|ref|YP_003669210.1|	-	1.5	9.1	45.6	0.98	9.7	9.7	4.4	2	2	2	4	4	4	0	Spectrin	repeat
DUF3450	PF11932.3	gi|297527186|ref|YP_003669210.1|	-	1.8	7.7	36.0	0.042	13.1	9.9	3.2	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF3450)
HOOK	PF05622.7	gi|297527186|ref|YP_003669210.1|	-	1.9	6.1	60.7	1.1	7.0	24.4	2.3	1	1	0	2	2	2	0	HOOK	protein
Retrotrans_gag	PF03732.12	gi|297527186|ref|YP_003669210.1|	-	2.7	8.1	13.8	2.5	8.2	0.7	3.7	2	1	0	2	2	2	0	Retrotransposon	gag	protein
EzrA	PF06160.7	gi|297527186|ref|YP_003669210.1|	-	3.1	5.8	52.4	0.3	9.2	22.8	2.4	1	1	0	2	2	2	0	Septation	ring	formation	regulator,	EzrA
MAP65_ASE1	PF03999.7	gi|297527186|ref|YP_003669210.1|	-	3.2	6.2	52.4	1.6	7.2	8.0	2.3	1	1	1	2	2	2	0	Microtubule	associated	protein	(MAP65/ASE1	family)
COG2	PF06148.6	gi|297527186|ref|YP_003669210.1|	-	3.7	7.4	41.2	7.7	6.3	3.3	4.9	1	1	3	4	4	3	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
GAS	PF13851.1	gi|297527186|ref|YP_003669210.1|	-	4.5	6.3	68.6	1.8	7.6	22.4	3.5	1	1	2	3	3	3	0	Growth-arrest	specific	micro-tubule	binding
eIF3_N	PF09440.5	gi|297527186|ref|YP_003669210.1|	-	4.7	7.3	33.0	0.12	12.5	5.4	4.2	1	1	3	4	4	4	0	eIF3	subunit	6	N	terminal	domain
DUF2664	PF10867.3	gi|297527186|ref|YP_003669210.1|	-	4.8	7.8	25.9	0.12	12.9	1.8	4.6	2	2	3	5	5	5	0	Protein	of	unknown	function	(DUF2664)
TPR_MLP1_2	PF07926.7	gi|297527186|ref|YP_003669210.1|	-	5	6.8	54.0	0.31	10.7	15.8	3.3	1	1	2	3	3	3	0	TPR/MLP1/MLP2-like	protein
IFT57	PF10498.4	gi|297527186|ref|YP_003669210.1|	-	5.4	5.6	56.1	0.03	13.0	16.4	3.1	1	1	1	2	2	2	0	Intra-flagellar	transport	protein	57
TraF_2	PF13729.1	gi|297527186|ref|YP_003669210.1|	-	5.5	5.7	7.8	15	4.3	1.7	3.5	1	1	3	4	4	4	0	F	plasmid	transfer	operon,	TraF,	protein
FliD_C	PF07195.7	gi|297527186|ref|YP_003669210.1|	-	7.3	5.8	28.9	0.039	13.2	9.4	3.6	2	2	0	2	2	1	0	Flagellar	hook-associated	protein	2	C-terminus
DUF4279	PF14106.1	gi|297527186|ref|YP_003669210.1|	-	7.6	6.4	26.9	3.9	7.3	0.7	5.7	2	1	0	5	5	5	0	Domain	of	unknown	function	(DUF4279)
DUF812	PF05667.6	gi|297527186|ref|YP_003669210.1|	-	7.7	4.8	56.8	3.9	5.8	2.4	3.3	1	1	2	3	3	3	0	Protein	of	unknown	function	(DUF812)
CENP-F_leu_zip	PF10473.4	gi|297527186|ref|YP_003669210.1|	-	8.2	6.2	65.7	4.9	7.0	22.8	4.4	1	1	3	4	4	3	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
SlyX	PF04102.7	gi|297527186|ref|YP_003669210.1|	-	8.8	6.7	44.0	0.16	12.3	7.1	6.2	2	2	4	6	6	6	0	SlyX
MitMem_reg	PF13012.1	gi|297527186|ref|YP_003669210.1|	-	8.8	6.4	32.9	0.46	10.5	8.0	4.0	1	1	3	4	4	4	0	Maintenance	of	mitochondrial	structure	and	function
Mod_r	PF07200.8	gi|297527186|ref|YP_003669210.1|	-	9	6.1	52.8	0.21	11.5	12.2	4.3	1	1	4	5	5	4	0	Modifier	of	rudimentary	(Mod(r))	protein
LXG	PF04740.7	gi|297527186|ref|YP_003669210.1|	-	10	5.8	37.6	2.4e+02	1.3	4.3	3.9	1	1	1	2	2	1	0	LXG	domain	of	WXG	superfamily
ATP-grasp_5	PF13549.1	gi|297527187|ref|YP_003669211.1|	-	1.4e-86	289.2	0.2	1.6e-86	289.1	0.1	1.0	1	0	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_2	PF08442.5	gi|297527187|ref|YP_003669211.1|	-	9.4e-06	25.1	0.5	1.3e-05	24.7	0.3	1.4	1	1	0	1	1	1	1	ATP-grasp	domain
ATP-grasp_4	PF13535.1	gi|297527187|ref|YP_003669211.1|	-	0.0034	17.1	0.0	0.005	16.6	0.0	1.2	1	0	0	1	1	1	1	ATP-grasp	domain
RimK	PF08443.6	gi|297527187|ref|YP_003669211.1|	-	0.0075	15.7	0.2	0.016	14.7	0.0	1.7	2	0	0	2	2	2	1	RimK-like	ATP-grasp	domain
CPSase_L_D2	PF02786.12	gi|297527187|ref|YP_003669211.1|	-	0.038	13.2	0.1	0.064	12.5	0.0	1.5	1	1	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	ATP	binding	domain
PPP5	PF08321.7	gi|297527187|ref|YP_003669211.1|	-	0.044	13.8	0.0	0.11	12.4	0.0	1.7	1	0	0	1	1	1	0	PPP5	TPR	repeat	region
Succ_CoA_lig	PF13607.1	gi|297527188|ref|YP_003669212.1|	-	4.4e-50	168.8	0.1	3.1e-48	162.9	0.0	2.8	3	0	0	3	3	3	1	Succinyl-CoA	ligase	like	flavodoxin	domain
CoA_binding_2	PF13380.1	gi|297527188|ref|YP_003669212.1|	-	1.4e-30	105.8	0.1	1.9e-28	98.9	0.1	2.7	3	0	0	3	3	3	1	CoA	binding	domain
CoA_binding	PF02629.14	gi|297527188|ref|YP_003669212.1|	-	2.5e-16	59.9	1.2	8.3e-16	58.2	0.6	2.1	2	0	0	2	2	2	1	CoA	binding	domain
NAD_Gly3P_dh_N	PF01210.18	gi|297527188|ref|YP_003669212.1|	-	0.013	15.2	0.0	0.081	12.6	0.0	2.1	2	0	0	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
F420_oxidored	PF03807.12	gi|297527188|ref|YP_003669212.1|	-	0.051	13.9	0.3	5.5	7.4	0.0	3.1	3	0	0	3	3	3	0	NADP	oxidoreductase	coenzyme	F420-dependent
GFO_IDH_MocA	PF01408.17	gi|297527188|ref|YP_003669212.1|	-	0.094	13.2	0.1	9	6.8	0.0	3.1	2	1	1	3	3	3	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
ATP_bind_1	PF03029.12	gi|297527189|ref|YP_003669213.1|	-	1.2e-58	198.5	0.0	1.3e-58	198.3	0.0	1.0	1	0	0	1	1	1	1	Conserved	hypothetical	ATP	binding	protein
AAA_17	PF13207.1	gi|297527189|ref|YP_003669213.1|	-	7.2e-06	26.8	0.0	1.2e-05	26.0	0.0	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|297527189|ref|YP_003669213.1|	-	5.9e-05	23.3	0.1	0.00026	21.2	0.0	2.1	1	1	0	1	1	1	1	AAA	domain
SRP54	PF00448.17	gi|297527189|ref|YP_003669213.1|	-	0.00032	20.2	0.0	0.0017	17.8	0.0	2.0	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
CbiA	PF01656.18	gi|297527189|ref|YP_003669213.1|	-	0.00037	19.9	0.1	0.00078	18.8	0.1	1.6	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
AAA_28	PF13521.1	gi|297527189|ref|YP_003669213.1|	-	0.00038	20.4	0.0	0.0012	18.7	0.0	1.8	1	1	0	1	1	1	1	AAA	domain
GTP_EFTU	PF00009.22	gi|297527189|ref|YP_003669213.1|	-	0.00092	18.6	0.3	0.021	14.2	0.2	2.6	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
DUF87	PF01935.12	gi|297527189|ref|YP_003669213.1|	-	0.0014	18.5	0.0	0.0033	17.2	0.0	1.7	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF87
KTI12	PF08433.5	gi|297527189|ref|YP_003669213.1|	-	0.0015	17.7	0.0	0.0082	15.3	0.0	1.9	2	0	0	2	2	2	1	Chromatin	associated	protein	KTI12
PduV-EutP	PF10662.4	gi|297527189|ref|YP_003669213.1|	-	0.0029	17.0	0.3	0.13	11.7	0.0	2.7	3	1	0	3	3	2	1	Ethanolamine	utilisation	-	propanediol	utilisation
MobB	PF03205.9	gi|297527189|ref|YP_003669213.1|	-	0.003	17.2	0.0	0.0056	16.3	0.0	1.4	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
T2SE	PF00437.15	gi|297527189|ref|YP_003669213.1|	-	0.0032	16.4	0.0	0.0055	15.6	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
ArsA_ATPase	PF02374.10	gi|297527189|ref|YP_003669213.1|	-	0.0052	15.8	0.0	0.013	14.5	0.0	1.6	1	0	0	1	1	1	1	Anion-transporting	ATPase
ArgK	PF03308.11	gi|297527189|ref|YP_003669213.1|	-	0.0055	15.5	0.0	0.011	14.5	0.0	1.4	1	0	0	1	1	1	1	ArgK	protein
AAA_24	PF13479.1	gi|297527189|ref|YP_003669213.1|	-	0.0058	16.2	0.0	0.01	15.4	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
NACHT	PF05729.7	gi|297527189|ref|YP_003669213.1|	-	0.0065	16.1	0.0	0.012	15.2	0.0	1.4	1	0	0	1	1	1	1	NACHT	domain
APS_kinase	PF01583.15	gi|297527189|ref|YP_003669213.1|	-	0.0074	15.9	0.0	0.013	15.1	0.0	1.3	1	0	0	1	1	1	1	Adenylylsulphate	kinase
AAA_16	PF13191.1	gi|297527189|ref|YP_003669213.1|	-	0.0084	16.1	0.0	0.014	15.4	0.0	1.3	1	0	0	1	1	1	1	AAA	ATPase	domain
PIN	PF01850.16	gi|297527189|ref|YP_003669213.1|	-	0.015	15.6	0.3	0.058	13.7	0.0	2.1	2	0	0	2	2	2	0	PIN	domain
AAA_10	PF12846.2	gi|297527189|ref|YP_003669213.1|	-	0.017	14.6	0.0	0.023	14.1	0.0	1.2	1	0	0	1	1	1	0	AAA-like	domain
AAA_30	PF13604.1	gi|297527189|ref|YP_003669213.1|	-	0.02	14.4	0.0	0.032	13.8	0.0	1.2	1	0	0	1	1	1	0	AAA	domain
AAA_19	PF13245.1	gi|297527189|ref|YP_003669213.1|	-	0.023	14.4	0.0	0.052	13.2	0.0	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
MMR_HSR1	PF01926.18	gi|297527189|ref|YP_003669213.1|	-	0.028	14.3	0.1	0.077	12.9	0.0	1.8	1	1	0	1	1	1	0	50S	ribosome-binding	GTPase
IstB_IS21	PF01695.12	gi|297527189|ref|YP_003669213.1|	-	0.03	13.7	0.0	0.049	13.0	0.0	1.3	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
PhoH	PF02562.11	gi|297527189|ref|YP_003669213.1|	-	0.032	13.4	0.0	0.068	12.4	0.0	1.5	1	0	0	1	1	1	0	PhoH-like	protein
AAA_29	PF13555.1	gi|297527189|ref|YP_003669213.1|	-	0.043	13.3	0.1	0.092	12.2	0.1	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_22	PF13401.1	gi|297527189|ref|YP_003669213.1|	-	0.071	13.2	0.0	0.16	12.1	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
Zeta_toxin	PF06414.7	gi|297527189|ref|YP_003669213.1|	-	0.076	12.1	0.0	0.11	11.5	0.0	1.3	1	0	0	1	1	1	0	Zeta	toxin
CPT	PF07931.7	gi|297527189|ref|YP_003669213.1|	-	0.087	12.4	0.0	0.15	11.6	0.0	1.4	1	0	0	1	1	1	0	Chloramphenicol	phosphotransferase-like	protein
Viral_helicase1	PF01443.13	gi|297527189|ref|YP_003669213.1|	-	0.12	11.8	0.0	0.17	11.3	0.0	1.3	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
cobW	PF02492.14	gi|297527189|ref|YP_003669213.1|	-	0.13	11.6	0.0	0.7	9.3	0.0	2.0	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
ABC_tran	PF00005.22	gi|297527189|ref|YP_003669213.1|	-	0.15	12.4	0.0	0.35	11.1	0.0	1.6	1	0	0	1	1	1	0	ABC	transporter
DUF2075	PF09848.4	gi|297527189|ref|YP_003669213.1|	-	0.18	10.7	0.0	0.25	10.2	0.0	1.2	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
Radical_SAM	PF04055.16	gi|297527190|ref|YP_003669214.1|	-	1.1e-19	71.1	0.0	3e-19	69.8	0.0	1.7	2	0	0	2	2	2	1	Radical	SAM	superfamily
Fer4_12	PF13353.1	gi|297527190|ref|YP_003669214.1|	-	1.4e-06	28.4	0.2	2.9e-06	27.4	0.1	1.5	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_14	PF13394.1	gi|297527190|ref|YP_003669214.1|	-	0.00085	19.3	0.1	0.0017	18.3	0.0	1.6	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
TF_Zn_Ribbon	PF08271.7	gi|297527190|ref|YP_003669214.1|	-	0.0053	16.0	6.4	0.54	9.6	0.0	3.6	4	0	0	4	4	4	2	TFIIB	zinc-binding
DZR	PF12773.2	gi|297527190|ref|YP_003669214.1|	-	0.01	15.6	0.0	0.01	15.6	0.0	2.8	2	1	0	2	2	2	0	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|297527190|ref|YP_003669214.1|	-	0.013	14.6	1.9	0.013	14.6	1.3	2.9	2	1	0	2	2	2	0	zinc-ribbon	domain
zf-NADH-PPase	PF09297.6	gi|297527190|ref|YP_003669214.1|	-	0.017	14.6	0.3	4	7.0	0.0	2.5	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|297527190|ref|YP_003669214.1|	-	0.023	14.3	0.1	0.066	12.8	0.0	1.8	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
zf-ISL3	PF14690.1	gi|297527190|ref|YP_003669214.1|	-	0.068	13.2	9.3	0.6	10.1	0.0	3.2	2	1	1	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Zn_Tnp_IS1595	PF12760.2	gi|297527190|ref|YP_003669214.1|	-	3.5	7.4	13.1	0.73	9.6	0.1	3.9	4	0	0	4	4	4	0	Transposase	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|297527190|ref|YP_003669214.1|	-	6.1	6.4	14.1	0.071	12.6	2.7	2.9	2	1	2	4	4	4	0	zinc-ribbon	domain
zf-C4_Topoisom	PF01396.14	gi|297527190|ref|YP_003669214.1|	-	8.2	6.0	10.6	1.4	8.4	0.0	3.3	3	0	0	3	3	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
Pribosyltran_N	PF13793.1	gi|297527191|ref|YP_003669215.1|	-	5.4e-29	100.2	0.0	1.4e-27	95.7	0.0	2.2	2	0	0	2	2	2	1	N-terminal	domain	of	ribose	phosphate	pyrophosphokinase
Pribosyltran	PF00156.22	gi|297527191|ref|YP_003669215.1|	-	6.5e-13	48.5	4.6	2.3e-12	46.7	0.8	3.3	3	1	0	3	3	3	1	Phosphoribosyl	transferase	domain
Pribosyl_synth	PF14572.1	gi|297527191|ref|YP_003669215.1|	-	2.2e-12	47.0	0.9	2.2e-12	47.0	0.6	2.3	3	0	0	3	3	3	1	Phosphoribosyl	synthetase-associated	domain
UPRTase	PF14681.1	gi|297527191|ref|YP_003669215.1|	-	0.00057	19.1	0.0	0.0012	18.1	0.0	1.5	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
PRTase_2	PF15609.1	gi|297527191|ref|YP_003669215.1|	-	0.002	17.4	0.0	0.0037	16.5	0.0	1.4	1	0	0	1	1	1	1	Phosphoribosyl	transferase
DUF2120	PF09893.4	gi|297527191|ref|YP_003669215.1|	-	0.047	13.6	0.0	0.11	12.4	0.0	1.6	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2120)
UPF0020	PF01170.13	gi|297527192|ref|YP_003669216.1|	-	3.3e-30	104.9	0.0	4.8e-30	104.4	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_26	PF13659.1	gi|297527192|ref|YP_003669216.1|	-	4.2e-13	49.3	0.0	6.4e-13	48.7	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
N6_N4_Mtase	PF01555.13	gi|297527192|ref|YP_003669216.1|	-	2e-10	40.5	0.0	2.8e-08	33.5	0.0	2.2	2	0	0	2	2	2	2	DNA	methylase
Methyltransf_31	PF13847.1	gi|297527192|ref|YP_003669216.1|	-	2.9e-07	30.1	0.0	9.5e-07	28.5	0.0	1.9	2	1	0	2	2	2	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|297527192|ref|YP_003669216.1|	-	6.8e-05	22.3	0.0	0.00013	21.3	0.0	1.5	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
N6_Mtase	PF02384.11	gi|297527192|ref|YP_003669216.1|	-	0.0032	16.5	0.0	0.0079	15.3	0.0	1.7	1	1	0	1	1	1	1	N-6	DNA	Methylase
Methyltransf_15	PF09445.5	gi|297527192|ref|YP_003669216.1|	-	0.0035	16.8	0.0	0.0069	15.9	0.0	1.5	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
MethyltransfD12	PF02086.10	gi|297527192|ref|YP_003669216.1|	-	0.018	14.4	0.1	0.66	9.3	0.0	2.8	3	0	0	3	3	3	0	D12	class	N6	adenine-specific	DNA	methyltransferase
Methyltransf_18	PF12847.2	gi|297527192|ref|YP_003669216.1|	-	0.05	14.1	0.0	0.12	12.9	0.0	1.7	2	0	0	2	2	2	0	Methyltransferase	domain
Lactamase_B_2	PF12706.2	gi|297527193|ref|YP_003669217.1|	-	2.3e-31	108.8	0.0	2.7e-31	108.6	0.0	1.0	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|297527193|ref|YP_003669217.1|	-	8.4e-13	48.4	0.0	1.3e-12	47.7	0.0	1.3	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_4	PF13691.1	gi|297527193|ref|YP_003669217.1|	-	2.9e-12	45.8	0.0	6.3e-12	44.7	0.0	1.5	1	0	0	1	1	1	1	tRNase	Z	endonuclease
RNA_binding	PF01877.12	gi|297527194|ref|YP_003669218.1|	-	1e-22	80.3	0.2	1.2e-22	80.1	0.2	1.1	1	0	0	1	1	1	1	RNA	binding
AAA_17	PF13207.1	gi|297527195|ref|YP_003669219.1|	-	2.8e-12	47.5	0.2	5.8e-12	46.4	0.1	1.5	1	1	0	1	1	1	1	AAA	domain
AAA_18	PF13238.1	gi|297527195|ref|YP_003669219.1|	-	8.9e-12	45.4	0.2	1.5e-11	44.6	0.0	1.4	2	0	0	2	2	2	1	AAA	domain
AAA_33	PF13671.1	gi|297527195|ref|YP_003669219.1|	-	9.2e-09	35.3	0.0	1.5e-08	34.5	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
Zeta_toxin	PF06414.7	gi|297527195|ref|YP_003669219.1|	-	0.00017	20.7	0.8	0.00049	19.2	0.5	1.9	1	1	0	1	1	1	1	Zeta	toxin
CoaE	PF01121.15	gi|297527195|ref|YP_003669219.1|	-	0.001	18.4	0.4	0.29	10.5	0.0	2.3	1	1	1	2	2	2	2	Dephospho-CoA	kinase
SKI	PF01202.17	gi|297527195|ref|YP_003669219.1|	-	0.0033	17.2	0.1	0.0087	15.9	0.1	1.7	1	1	0	1	1	1	1	Shikimate	kinase
Cytidylate_kin2	PF13189.1	gi|297527195|ref|YP_003669219.1|	-	0.029	14.2	0.7	0.39	10.6	0.5	2.3	1	1	0	1	1	1	0	Cytidylate	kinase-like	family
AAA	PF00004.24	gi|297527195|ref|YP_003669219.1|	-	0.029	14.5	0.0	0.067	13.3	0.0	1.6	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
NB-ARC	PF00931.17	gi|297527195|ref|YP_003669219.1|	-	0.047	12.5	0.7	0.24	10.1	0.5	1.9	1	1	0	1	1	1	0	NB-ARC	domain
ATP_bind_2	PF03668.10	gi|297527195|ref|YP_003669219.1|	-	0.055	12.5	0.1	0.096	11.7	0.0	1.3	1	0	0	1	1	1	0	P-loop	ATPase	protein	family
ApbA_C	PF08546.6	gi|297527195|ref|YP_003669219.1|	-	0.058	13.3	0.0	0.083	12.8	0.0	1.5	1	1	0	1	1	1	0	Ketopantoate	reductase	PanE/ApbA	C	terminal
AAA_25	PF13481.1	gi|297527195|ref|YP_003669219.1|	-	0.14	11.4	0.3	11	5.3	0.0	2.4	2	1	0	2	2	2	0	AAA	domain
LigT_PEase	PF02834.11	gi|297527196|ref|YP_003669220.1|	-	2.4e-34	117.1	0.0	4.8e-19	68.1	0.0	2.0	2	0	0	2	2	2	2	LigT	like	Phosphoesterase
AKAP7_NLS	PF10469.4	gi|297527196|ref|YP_003669220.1|	-	5.3e-15	55.6	0.0	2e-14	53.8	0.0	1.7	1	1	0	1	1	1	1	AKAP7	2'5'	RNA	ligase-like	domain
2_5_RNA_ligase2	PF13563.1	gi|297527196|ref|YP_003669220.1|	-	3e-13	49.7	0.0	3.8e-13	49.4	0.0	1.1	1	0	0	1	1	1	1	2'-5'	RNA	ligase	superfamily
HVSL	PF09749.4	gi|297527196|ref|YP_003669220.1|	-	3.2e-06	26.3	0.0	1.2e-05	24.5	0.0	1.7	1	1	1	2	2	2	1	Uncharacterised	conserved	protein
Corona_NS2A	PF05213.7	gi|297527196|ref|YP_003669220.1|	-	8.7e-05	21.9	0.0	9.2e-05	21.8	0.0	1.2	1	0	0	1	1	1	1	Coronavirus	NS2A	protein
tRNA_NucTransf2	PF09249.6	gi|297527197|ref|YP_003669221.1|	-	4.9e-42	142.4	0.0	9.7e-42	141.4	0.0	1.5	1	0	0	1	1	1	1	tRNA	nucleotidyltransferase,	second	domain
NTP_transf_2	PF01909.18	gi|297527197|ref|YP_003669221.1|	-	2.5e-07	30.9	0.1	2.5e-07	30.9	0.1	3.1	4	0	0	4	4	4	1	Nucleotidyltransferase	domain
PAP_central	PF04928.12	gi|297527197|ref|YP_003669221.1|	-	0.11	11.2	0.0	0.31	9.8	0.0	1.7	2	0	0	2	2	2	0	Poly(A)	polymerase	central	domain
Choline_kinase	PF01633.15	gi|297527198|ref|YP_003669222.1|	-	0.082	12.4	0.2	9.2	5.7	0.0	2.2	1	1	0	2	2	2	0	Choline/ethanolamine	kinase
Nudix_N_2	PF14803.1	gi|297527199|ref|YP_003669223.1|	-	0.0048	16.5	1.5	0.055	13.1	0.2	2.2	2	0	0	2	2	2	1	Nudix	N-terminal
Zn_Tnp_IS1595	PF12760.2	gi|297527199|ref|YP_003669223.1|	-	0.0068	16.1	0.4	3.5	7.5	0.0	2.2	2	0	0	2	2	2	2	Transposase	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|297527199|ref|YP_003669223.1|	-	0.0079	15.4	1.0	0.69	9.2	0.0	2.3	2	0	0	2	2	2	1	TFIIB	zinc-binding
zf-3CxxC	PF13695.1	gi|297527199|ref|YP_003669223.1|	-	0.03	14.5	0.0	0.034	14.3	0.0	1.1	1	0	0	1	1	1	0	Zinc-binding	domain
DUF2757	PF10955.3	gi|297527199|ref|YP_003669223.1|	-	0.069	13.3	1.0	0.27	11.4	0.2	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2757)
DUF2296	PF10058.4	gi|297527199|ref|YP_003669223.1|	-	0.092	12.5	1.6	3.6	7.3	0.2	2.3	2	0	0	2	2	2	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
TFIIS_C	PF01096.13	gi|297527199|ref|YP_003669223.1|	-	0.094	12.3	2.2	5.3	6.7	0.1	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
UPF0547	PF10571.4	gi|297527199|ref|YP_003669223.1|	-	0.11	12.1	4.0	1.2	8.8	0.7	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
HypA	PF01155.14	gi|297527199|ref|YP_003669223.1|	-	0.13	12.0	0.0	0.28	10.8	0.0	1.6	1	1	1	2	2	2	0	Hydrogenase	expression/synthesis	hypA	family
zf-Mss51	PF13824.1	gi|297527199|ref|YP_003669223.1|	-	0.14	12.0	0.3	2.3	8.1	0.1	2.1	2	0	0	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
zinc_ribbon_2	PF13240.1	gi|297527199|ref|YP_003669223.1|	-	0.15	11.6	3.6	4.7	6.8	0.2	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|297527199|ref|YP_003669223.1|	-	0.3	10.3	1.9	5.9	6.2	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
Rubredoxin	PF00301.15	gi|297527199|ref|YP_003669223.1|	-	0.47	10.3	4.4	0.67	9.8	0.4	2.1	2	0	0	2	2	2	0	Rubredoxin
PhnA_Zn_Ribbon	PF08274.7	gi|297527199|ref|YP_003669223.1|	-	0.5	10.2	2.4	5.4	6.8	0.2	2.2	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
Fer4	PF00037.22	gi|297527200|ref|YP_003669224.1|	-	3.5e-10	39.0	10.1	4.2e-05	22.9	1.4	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|297527200|ref|YP_003669224.1|	-	1.8e-09	37.3	3.1	2.7e-09	36.7	2.1	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_6	PF12837.2	gi|297527200|ref|YP_003669224.1|	-	3.3e-07	29.8	12.7	5.4e-05	22.8	0.7	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|297527200|ref|YP_003669224.1|	-	5.1e-07	29.9	9.2	2.2e-06	27.9	6.9	1.6	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|297527200|ref|YP_003669224.1|	-	6.4e-07	29.0	9.1	5e-06	26.2	7.1	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|297527200|ref|YP_003669224.1|	-	8.1e-07	29.2	9.6	1.3e-06	28.5	6.6	1.4	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|297527200|ref|YP_003669224.1|	-	8.9e-07	28.4	15.0	0.34	10.9	10.4	2.4	1	1	0	1	1	1	1	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|297527200|ref|YP_003669224.1|	-	1.3e-05	25.8	2.3	0.015	15.9	0.1	2.4	2	0	0	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_4	PF12800.2	gi|297527200|ref|YP_003669224.1|	-	0.0002	21.4	10.4	0.05	13.9	0.7	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|297527200|ref|YP_003669224.1|	-	0.00049	20.0	8.5	0.02	14.9	7.2	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|297527200|ref|YP_003669224.1|	-	0.00066	19.9	6.9	0.078	13.3	0.4	2.3	1	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|297527200|ref|YP_003669224.1|	-	0.034	14.7	10.7	0.34	11.5	7.4	2.2	1	1	0	1	1	1	0	4Fe-4S	single	cluster	domain
Fer4_3	PF12798.2	gi|297527200|ref|YP_003669224.1|	-	0.29	11.7	17.5	0.7	10.6	4.1	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|297527200|ref|YP_003669224.1|	-	0.72	10.3	12.1	1.3	9.4	0.1	2.5	3	0	0	3	3	2	0	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|297527200|ref|YP_003669224.1|	-	0.75	10.2	12.1	66	4.0	8.4	2.3	1	1	0	1	1	1	0	4Fe-4S	single	cluster	domain
HTH_5	PF01022.15	gi|297527201|ref|YP_003669225.1|	-	2.4e-14	52.7	0.5	5.5e-14	51.5	0.3	1.7	1	0	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
HTH_20	PF12840.2	gi|297527201|ref|YP_003669225.1|	-	1.2e-06	28.2	0.1	1.8e-06	27.6	0.0	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_9	PF08221.6	gi|297527201|ref|YP_003669225.1|	-	0.095	12.5	0.4	0.19	11.6	0.3	1.4	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
HTH_Crp_2	PF13545.1	gi|297527201|ref|YP_003669225.1|	-	0.11	12.2	1.2	0.57	10.0	0.1	2.2	1	1	1	2	2	2	0	Crp-like	helix-turn-helix	domain
Sigma70_r4	PF04545.11	gi|297527202|ref|YP_003669226.1|	-	0.088	12.1	0.1	0.12	11.6	0.1	1.2	1	0	0	1	1	1	0	Sigma-70,	region	4
MCM	PF00493.18	gi|297527203|ref|YP_003669227.1|	-	1.2e-130	435.2	0.2	1.9e-69	233.9	0.0	2.2	2	0	0	2	2	2	2	MCM2/3/5	family
MCM_N	PF14551.1	gi|297527203|ref|YP_003669227.1|	-	2.1e-24	86.3	0.1	8.4e-24	84.3	0.0	2.1	1	0	0	1	1	1	1	MCM	N-terminal	domain
AAA_5	PF07728.9	gi|297527203|ref|YP_003669227.1|	-	1.4e-06	28.0	0.0	3.9e-06	26.6	0.0	1.7	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
Intein_splicing	PF14890.1	gi|297527203|ref|YP_003669227.1|	-	0.0019	17.1	4.6	0.051	12.4	3.1	3.0	1	1	0	1	1	1	1	Intein	splicing	domain
Sigma54_activat	PF00158.21	gi|297527203|ref|YP_003669227.1|	-	0.033	13.6	0.0	0.14	11.6	0.0	1.9	1	1	0	1	1	1	0	Sigma-54	interaction	domain
TPR_11	PF13414.1	gi|297527203|ref|YP_003669227.1|	-	0.049	13.2	0.2	2.9	7.5	0.1	2.8	2	0	0	2	2	2	0	TPR	repeat
Rrf2	PF02082.15	gi|297527203|ref|YP_003669227.1|	-	0.063	13.4	0.0	19	5.4	0.0	2.9	2	0	0	2	2	2	0	Transcriptional	regulator
DUF2312	PF10073.4	gi|297527203|ref|YP_003669227.1|	-	0.16	11.3	10.2	0.065	12.5	2.1	3.2	3	0	0	3	3	3	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2312)
Sld5	PF05916.6	gi|297527204|ref|YP_003669228.1|	-	4e-10	39.9	1.0	6.7e-10	39.2	0.7	1.4	1	0	0	1	1	1	1	GINS	complex	protein
Rep_fac_C	PF08542.6	gi|297527205|ref|YP_003669229.1|	-	9.1e-23	80.0	0.3	2.7e-22	78.5	0.0	2.0	2	0	0	2	2	1	1	Replication	factor	C	C-terminal	domain
AAA	PF00004.24	gi|297527205|ref|YP_003669229.1|	-	2.3e-16	60.1	0.0	4.6e-16	59.2	0.0	1.5	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
DNA_pol3_delta2	PF13177.1	gi|297527205|ref|YP_003669229.1|	-	9.6e-16	57.8	0.1	1.2e-13	51.0	0.0	2.3	1	1	0	1	1	1	1	DNA	polymerase	III,	delta	subunit
Rad17	PF03215.10	gi|297527205|ref|YP_003669229.1|	-	8.4e-11	41.2	0.0	4.7e-06	25.5	0.0	2.1	1	1	1	2	2	2	2	Rad17	cell	cycle	checkpoint	protein
RuvB_N	PF05496.7	gi|297527205|ref|YP_003669229.1|	-	1.1e-09	37.6	0.1	1.7e-08	33.8	0.0	2.1	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_22	PF13401.1	gi|297527205|ref|YP_003669229.1|	-	6.1e-08	32.8	0.2	0.017	15.2	0.0	2.9	1	1	1	2	2	2	2	AAA	domain
DNA_pol3_delta	PF06144.8	gi|297527205|ref|YP_003669229.1|	-	3.7e-07	29.8	0.1	9.9e-07	28.4	0.1	1.6	2	0	0	2	2	1	1	DNA	polymerase	III,	delta	subunit
AAA_3	PF07726.6	gi|297527205|ref|YP_003669229.1|	-	1e-06	28.4	0.0	1.8e-06	27.5	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_16	PF13191.1	gi|297527205|ref|YP_003669229.1|	-	1.3e-06	28.5	2.0	0.00013	22.0	0.0	3.1	2	2	1	3	3	3	1	AAA	ATPase	domain
AAA_14	PF13173.1	gi|297527205|ref|YP_003669229.1|	-	1.3e-06	28.3	0.1	4.2e-05	23.4	0.0	2.2	1	1	1	2	2	2	1	AAA	domain
AAA_5	PF07728.9	gi|297527205|ref|YP_003669229.1|	-	5.6e-06	26.1	0.0	2.1e-05	24.2	0.0	2.0	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
TIP49	PF06068.8	gi|297527205|ref|YP_003669229.1|	-	2.3e-05	23.3	0.0	0.14	10.8	0.0	2.2	2	0	0	2	2	2	2	TIP49	C-terminus
IstB_IS21	PF01695.12	gi|297527205|ref|YP_003669229.1|	-	4.4e-05	22.9	0.0	0.0001	21.7	0.0	1.6	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
AAA_18	PF13238.1	gi|297527205|ref|YP_003669229.1|	-	8.6e-05	22.8	0.2	0.00065	20.0	0.0	2.5	2	2	0	2	2	2	1	AAA	domain
Sigma54_activ_2	PF14532.1	gi|297527205|ref|YP_003669229.1|	-	0.00013	21.9	0.0	0.00045	20.2	0.0	1.8	1	1	0	1	1	1	1	Sigma-54	interaction	domain
Mg_chelatase	PF01078.16	gi|297527205|ref|YP_003669229.1|	-	0.00014	21.1	0.1	0.005	16.0	0.0	2.3	1	1	1	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_19	PF13245.1	gi|297527205|ref|YP_003669229.1|	-	0.00016	21.3	0.0	0.0004	20.0	0.0	1.8	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_10	PF12846.2	gi|297527205|ref|YP_003669229.1|	-	0.00033	20.1	0.1	0.0033	16.8	0.0	2.4	1	1	0	1	1	1	1	AAA-like	domain
AAA_25	PF13481.1	gi|297527205|ref|YP_003669229.1|	-	0.00043	19.7	2.2	0.023	14.0	1.1	3.3	1	1	1	2	2	2	1	AAA	domain
AAA_33	PF13671.1	gi|297527205|ref|YP_003669229.1|	-	0.00048	20.0	0.0	0.0014	18.5	0.0	1.8	1	0	0	1	1	1	1	AAA	domain
FtsK_SpoIIIE	PF01580.13	gi|297527205|ref|YP_003669229.1|	-	0.00049	19.6	0.1	0.0019	17.7	0.0	2.1	2	2	1	3	3	3	1	FtsK/SpoIIIE	family
KTI12	PF08433.5	gi|297527205|ref|YP_003669229.1|	-	0.00074	18.8	0.0	0.0014	17.9	0.0	1.5	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
PhoH	PF02562.11	gi|297527205|ref|YP_003669229.1|	-	0.0016	17.6	0.1	0.35	10.0	0.0	2.4	1	1	0	2	2	2	1	PhoH-like	protein
AAA_30	PF13604.1	gi|297527205|ref|YP_003669229.1|	-	0.0023	17.5	0.6	0.063	12.8	0.4	2.4	1	1	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|297527205|ref|YP_003669229.1|	-	0.0041	17.9	0.0	0.009	16.8	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_2	PF07724.9	gi|297527205|ref|YP_003669229.1|	-	0.0048	16.8	0.0	0.0089	15.9	0.0	1.4	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
T2SE	PF00437.15	gi|297527205|ref|YP_003669229.1|	-	0.0091	14.9	0.0	0.049	12.5	0.0	2.1	2	0	0	2	2	2	1	Type	II/IV	secretion	system	protein
Arch_ATPase	PF01637.13	gi|297527205|ref|YP_003669229.1|	-	0.0096	15.6	0.0	0.038	13.6	0.0	1.8	1	1	1	2	2	2	1	Archaeal	ATPase
AAA_11	PF13086.1	gi|297527205|ref|YP_003669229.1|	-	0.016	14.8	0.0	0.021	14.4	0.0	1.4	1	1	0	1	1	1	0	AAA	domain
DUF815	PF05673.8	gi|297527205|ref|YP_003669229.1|	-	0.016	14.1	0.0	0.028	13.3	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
Sigma54_activat	PF00158.21	gi|297527205|ref|YP_003669229.1|	-	0.016	14.7	0.0	0.81	9.1	0.0	2.4	2	0	0	2	2	2	0	Sigma-54	interaction	domain
AAA_28	PF13521.1	gi|297527205|ref|YP_003669229.1|	-	0.017	15.0	0.0	0.043	13.7	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
DEAD	PF00270.24	gi|297527205|ref|YP_003669229.1|	-	0.019	14.4	0.1	5.3	6.5	0.0	2.4	1	1	0	2	2	2	0	DEAD/DEAH	box	helicase
Nse4-Nse3_bdg	PF15412.1	gi|297527205|ref|YP_003669229.1|	-	0.029	14.2	0.0	1.4	8.8	0.0	3.0	3	0	0	3	3	2	0	Binding	domain	of	Nse4/EID3	to	Nse3-MAGE
RNA_helicase	PF00910.17	gi|297527205|ref|YP_003669229.1|	-	0.033	14.3	0.0	0.063	13.4	0.0	1.6	1	1	0	1	1	1	0	RNA	helicase
ResIII	PF04851.10	gi|297527205|ref|YP_003669229.1|	-	0.034	13.9	0.0	0.14	11.9	0.0	1.9	1	1	1	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
Viral_helicase1	PF01443.13	gi|297527205|ref|YP_003669229.1|	-	0.049	13.1	0.0	0.074	12.5	0.0	1.2	1	0	0	1	1	1	0	Viral	(Superfamily	1)	RNA	helicase
SNF2_N	PF00176.18	gi|297527205|ref|YP_003669229.1|	-	0.053	12.3	0.0	1.4	7.6	0.0	2.1	1	1	0	2	2	2	0	SNF2	family	N-terminal	domain
Zeta_toxin	PF06414.7	gi|297527205|ref|YP_003669229.1|	-	0.055	12.5	0.0	0.13	11.3	0.0	1.6	1	0	0	1	1	1	0	Zeta	toxin
NTPase_1	PF03266.10	gi|297527205|ref|YP_003669229.1|	-	0.069	12.8	0.1	0.91	9.2	0.0	2.3	1	1	1	2	2	2	0	NTPase
DNA_pol3_gamma3	PF12169.3	gi|297527205|ref|YP_003669229.1|	-	0.076	12.7	1.2	9	6.0	0.0	3.2	3	0	0	3	3	3	0	DNA	polymerase	III	subunits	gamma	and	tau	domain	III
NACHT	PF05729.7	gi|297527205|ref|YP_003669229.1|	-	0.088	12.4	0.0	0.4	10.3	0.0	2.0	1	1	0	1	1	1	0	NACHT	domain
AAA	PF00004.24	gi|297527206|ref|YP_003669230.1|	-	3.6e-15	56.3	0.0	7.8e-15	55.2	0.0	1.6	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Rad17	PF03215.10	gi|297527206|ref|YP_003669230.1|	-	2.4e-12	46.3	0.2	7.8e-07	28.1	0.0	2.9	2	1	1	3	3	3	2	Rad17	cell	cycle	checkpoint	protein
RuvB_N	PF05496.7	gi|297527206|ref|YP_003669230.1|	-	1.8e-10	40.2	0.0	2.2e-07	30.1	0.0	2.1	1	1	1	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
DUF815	PF05673.8	gi|297527206|ref|YP_003669230.1|	-	5.5e-09	35.3	0.0	2.5e-08	33.1	0.0	1.8	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF815)
AAA_14	PF13173.1	gi|297527206|ref|YP_003669230.1|	-	9.3e-07	28.7	0.0	1.8e-06	27.9	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|297527206|ref|YP_003669230.1|	-	3.1e-06	28.0	0.2	2.8e-05	24.9	0.1	2.5	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|297527206|ref|YP_003669230.1|	-	4e-06	26.9	0.2	3.2e-05	24.0	0.0	2.3	2	1	1	3	3	3	1	AAA	ATPase	domain
AAA_5	PF07728.9	gi|297527206|ref|YP_003669230.1|	-	1.4e-05	24.8	0.0	2.7e-05	23.9	0.0	1.6	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
Arch_ATPase	PF01637.13	gi|297527206|ref|YP_003669230.1|	-	3.6e-05	23.5	0.0	0.0001	22.0	0.0	1.8	1	1	0	1	1	1	1	Archaeal	ATPase
AAA_22	PF13401.1	gi|297527206|ref|YP_003669230.1|	-	5.8e-05	23.2	0.0	0.00099	19.2	0.0	2.4	1	1	0	1	1	1	1	AAA	domain
TIP49	PF06068.8	gi|297527206|ref|YP_003669230.1|	-	0.00012	20.8	0.4	0.15	10.7	0.0	2.2	2	0	0	2	2	2	2	TIP49	C-terminus
Bac_DnaA	PF00308.13	gi|297527206|ref|YP_003669230.1|	-	0.00027	20.6	0.0	0.00051	19.7	0.0	1.4	1	0	0	1	1	1	1	Bacterial	dnaA	protein
Zeta_toxin	PF06414.7	gi|297527206|ref|YP_003669230.1|	-	0.00028	20.0	0.0	0.00049	19.2	0.0	1.3	1	0	0	1	1	1	1	Zeta	toxin
AAA_2	PF07724.9	gi|297527206|ref|YP_003669230.1|	-	0.00042	20.2	0.0	0.00074	19.4	0.0	1.3	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
DNA_pol3_delta	PF06144.8	gi|297527206|ref|YP_003669230.1|	-	0.00081	18.9	0.2	0.0023	17.4	0.0	1.8	2	0	0	2	2	2	1	DNA	polymerase	III,	delta	subunit
IstB_IS21	PF01695.12	gi|297527206|ref|YP_003669230.1|	-	0.0019	17.6	0.0	0.0036	16.7	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
PPV_E1_C	PF00519.12	gi|297527206|ref|YP_003669230.1|	-	0.0034	16.0	0.0	0.0076	14.9	0.0	1.6	1	0	0	1	1	1	1	Papillomavirus	helicase
Viral_helicase1	PF01443.13	gi|297527206|ref|YP_003669230.1|	-	0.005	16.3	0.0	0.0086	15.6	0.0	1.3	1	0	0	1	1	1	1	Viral	(Superfamily	1)	RNA	helicase
RNA_helicase	PF00910.17	gi|297527206|ref|YP_003669230.1|	-	0.007	16.5	0.0	0.019	15.1	0.0	1.7	1	0	0	1	1	1	1	RNA	helicase
DUF258	PF03193.11	gi|297527206|ref|YP_003669230.1|	-	0.0089	15.2	0.0	0.014	14.5	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
ABC_tran	PF00005.22	gi|297527206|ref|YP_003669230.1|	-	0.05	13.8	0.0	0.3	11.3	0.0	2.0	1	1	1	2	2	2	0	ABC	transporter
AAA_24	PF13479.1	gi|297527206|ref|YP_003669230.1|	-	0.052	13.1	0.0	0.095	12.2	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_29	PF13555.1	gi|297527206|ref|YP_003669230.1|	-	0.085	12.3	0.0	0.17	11.4	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_33	PF13671.1	gi|297527206|ref|YP_003669230.1|	-	0.086	12.7	0.0	0.2	11.5	0.0	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_30	PF13604.1	gi|297527206|ref|YP_003669230.1|	-	0.088	12.3	0.4	0.65	9.5	0.1	2.2	2	1	0	2	2	2	0	AAA	domain
NB-ARC	PF00931.17	gi|297527206|ref|YP_003669230.1|	-	0.14	11.0	0.0	0.28	9.9	0.0	1.5	1	0	0	1	1	1	0	NB-ARC	domain
KaiC	PF06745.8	gi|297527206|ref|YP_003669230.1|	-	0.14	11.2	0.1	0.56	9.2	0.0	2.0	3	1	0	3	3	3	0	KaiC
SMC_N	PF02463.14	gi|297527206|ref|YP_003669230.1|	-	0.18	10.9	0.0	0.35	10.0	0.0	1.5	1	1	0	1	1	1	0	RecF/RecN/SMC	N	terminal	domain
HTH_45	PF14947.1	gi|297527207|ref|YP_003669231.1|	-	1.5e-05	24.6	0.0	1.9e-05	24.3	0.0	1.1	1	0	0	1	1	1	1	Winged	helix-turn-helix
HTH_27	PF13463.1	gi|297527207|ref|YP_003669231.1|	-	0.00019	21.6	0.2	0.00022	21.4	0.1	1.1	1	0	0	1	1	1	1	Winged	helix	DNA-binding	domain
HTH_IclR	PF09339.5	gi|297527207|ref|YP_003669231.1|	-	0.00039	19.9	0.4	0.0042	16.6	0.3	2.1	1	1	0	1	1	1	1	IclR	helix-turn-helix	domain
HTH_20	PF12840.2	gi|297527207|ref|YP_003669231.1|	-	0.00046	19.9	0.2	0.00053	19.7	0.1	1.1	1	0	0	1	1	1	1	Helix-turn-helix	domain
MarR_2	PF12802.2	gi|297527207|ref|YP_003669231.1|	-	0.0015	18.1	0.4	0.0019	17.8	0.3	1.1	1	0	0	1	1	1	1	MarR	family
Rrf2	PF02082.15	gi|297527207|ref|YP_003669231.1|	-	0.0047	17.0	0.0	0.0055	16.8	0.0	1.1	1	0	0	1	1	1	1	Transcriptional	regulator
TrmB	PF01978.14	gi|297527207|ref|YP_003669231.1|	-	0.0074	15.9	0.4	0.0089	15.7	0.3	1.1	1	0	0	1	1	1	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_5	PF01022.15	gi|297527207|ref|YP_003669231.1|	-	0.0092	15.6	0.3	0.018	14.6	0.2	1.5	1	1	0	1	1	1	1	Bacterial	regulatory	protein,	arsR	family
DUF977	PF06163.6	gi|297527207|ref|YP_003669231.1|	-	0.012	15.3	0.2	0.013	15.2	0.1	1.0	1	0	0	1	1	1	0	Bacterial	protein	of	unknown	function	(DUF977)
HemN_C	PF06969.11	gi|297527207|ref|YP_003669231.1|	-	0.023	14.7	0.8	0.029	14.4	0.5	1.2	1	0	0	1	1	1	0	HemN	C-terminal	domain
MarR	PF01047.17	gi|297527207|ref|YP_003669231.1|	-	0.031	13.9	0.1	0.042	13.5	0.1	1.1	1	0	0	1	1	1	0	MarR	family
HTH_29	PF13551.1	gi|297527207|ref|YP_003669231.1|	-	0.044	13.9	0.2	0.048	13.8	0.1	1.1	1	0	0	1	1	1	0	Winged	helix-turn	helix
HTH_24	PF13412.1	gi|297527207|ref|YP_003669231.1|	-	0.059	12.7	3.2	0.57	9.6	2.2	2.2	1	1	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
Cdc6_C	PF09079.6	gi|297527208|ref|YP_003669232.1|	-	1.9e-27	94.7	0.0	7.1e-27	92.9	0.0	2.0	1	0	0	1	1	1	1	CDC6,	C	terminal
AAA_22	PF13401.1	gi|297527208|ref|YP_003669232.1|	-	2.1e-13	50.5	0.0	4.6e-13	49.4	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|297527208|ref|YP_003669232.1|	-	1.1e-07	32.0	0.0	3.2e-07	30.5	0.0	1.8	1	1	0	1	1	1	1	AAA	ATPase	domain
Arch_ATPase	PF01637.13	gi|297527208|ref|YP_003669232.1|	-	0.00017	21.3	0.1	0.00028	20.6	0.1	1.3	1	0	0	1	1	1	1	Archaeal	ATPase
AAA	PF00004.24	gi|297527208|ref|YP_003669232.1|	-	0.00023	21.3	0.0	0.00045	20.4	0.0	1.5	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sigma54_activat	PF00158.21	gi|297527208|ref|YP_003669232.1|	-	0.008	15.6	0.0	0.014	14.8	0.0	1.4	1	0	0	1	1	1	1	Sigma-54	interaction	domain
AAA_17	PF13207.1	gi|297527208|ref|YP_003669232.1|	-	0.032	15.0	0.2	0.12	13.1	0.2	2.2	1	1	0	1	1	1	0	AAA	domain
AAA_19	PF13245.1	gi|297527208|ref|YP_003669232.1|	-	0.13	12.0	0.0	0.33	10.7	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
TrkA_N	PF02254.13	gi|297527210|ref|YP_003669234.1|	-	4.3e-31	107.3	4.0	7.7e-31	106.4	2.7	1.4	1	0	0	1	1	1	1	TrkA-N	domain
TrkA_C	PF02080.16	gi|297527210|ref|YP_003669234.1|	-	1.4e-09	37.4	2.0	5.5e-08	32.2	0.0	2.9	3	0	0	3	3	3	1	TrkA-C	domain
F420_oxidored	PF03807.12	gi|297527210|ref|YP_003669234.1|	-	1.3e-06	28.6	0.9	0.00012	22.4	0.4	2.6	2	1	0	2	2	2	1	NADP	oxidoreductase	coenzyme	F420-dependent
NAD_binding_10	PF13460.1	gi|297527210|ref|YP_003669234.1|	-	4.8e-06	26.6	0.7	7.3e-06	26.1	0.5	1.2	1	0	0	1	1	1	1	NADH(P)-binding
NAD_binding_7	PF13241.1	gi|297527210|ref|YP_003669234.1|	-	1.9e-05	24.8	0.7	3.2e-05	24.1	0.5	1.4	1	0	0	1	1	1	1	Putative	NAD(P)-binding
Shikimate_DH	PF01488.15	gi|297527210|ref|YP_003669234.1|	-	6.8e-05	22.9	1.1	0.00011	22.2	0.5	1.6	2	0	0	2	2	2	1	Shikimate	/	quinate	5-dehydrogenase
Pyr_redox	PF00070.22	gi|297527210|ref|YP_003669234.1|	-	9e-05	22.7	0.4	0.00019	21.7	0.3	1.6	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_Gly3P_dh_N	PF01210.18	gi|297527210|ref|YP_003669234.1|	-	0.00048	19.8	0.1	0.0074	16.0	0.0	2.4	2	1	0	2	2	2	1	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
3HCDH_N	PF02737.13	gi|297527210|ref|YP_003669234.1|	-	0.00097	18.8	0.3	0.0014	18.3	0.2	1.4	1	0	0	1	1	1	1	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
Chlam_vir	PF05475.6	gi|297527210|ref|YP_003669234.1|	-	0.0055	15.8	1.2	0.0062	15.6	0.8	1.1	1	0	0	1	1	1	1	Chlamydia	virulence	protein	PGP3-D
NmrA	PF05368.8	gi|297527210|ref|YP_003669234.1|	-	0.006	15.8	1.0	0.0091	15.2	0.7	1.2	1	0	0	1	1	1	1	NmrA-like	family
DAO	PF01266.19	gi|297527210|ref|YP_003669234.1|	-	0.0071	15.2	0.1	0.01	14.7	0.1	1.2	1	0	0	1	1	1	1	FAD	dependent	oxidoreductase
Rossmann-like	PF10727.4	gi|297527210|ref|YP_003669234.1|	-	0.0098	15.6	0.6	0.028	14.1	0.2	2.0	1	1	1	2	2	2	1	Rossmann-like	domain
ApbA	PF02558.11	gi|297527210|ref|YP_003669234.1|	-	0.016	14.6	0.2	0.061	12.7	0.2	1.8	2	0	0	2	2	2	0	Ketopantoate	reductase	PanE/ApbA
UDPG_MGDP_dh_N	PF03721.9	gi|297527210|ref|YP_003669234.1|	-	0.023	14.0	0.0	0.049	13.0	0.0	1.5	1	0	0	1	1	1	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
CPSase_L_chain	PF00289.17	gi|297527210|ref|YP_003669234.1|	-	0.03	14.4	0.0	0.056	13.5	0.0	1.5	1	0	0	1	1	1	0	Carbamoyl-phosphate	synthase	L	chain,	N-terminal	domain
NAD_binding_2	PF03446.10	gi|297527210|ref|YP_003669234.1|	-	0.031	14.1	0.1	0.049	13.4	0.1	1.4	1	0	0	1	1	1	0	NAD	binding	domain	of	6-phosphogluconate	dehydrogenase
adh_short	PF00106.20	gi|297527210|ref|YP_003669234.1|	-	0.061	13.2	0.5	0.092	12.6	0.4	1.2	1	0	0	1	1	1	0	short	chain	dehydrogenase
OrfB_Zn_ribbon	PF07282.6	gi|297527212|ref|YP_003669236.1|	-	1e-23	82.7	0.0	2.4e-23	81.5	0.0	1.7	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
OrfB_IS605	PF01385.14	gi|297527212|ref|YP_003669236.1|	-	6.4e-10	38.8	8.6	6.4e-10	38.8	6.0	1.5	1	1	0	1	1	1	1	Probable	transposase
zinc_ribbon_5	PF13719.1	gi|297527212|ref|YP_003669236.1|	-	1.4	8.5	5.2	4.1	7.0	2.1	2.6	2	1	0	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|297527212|ref|YP_003669236.1|	-	2	8.1	5.1	4.4	7.0	2.1	2.5	2	1	0	2	2	2	0	zinc-ribbon	domain
VWA	PF00092.23	gi|297527214|ref|YP_003669238.1|	-	0.0069	16.1	0.0	0.007	16.1	0.0	1.2	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA_2	PF13519.1	gi|297527215|ref|YP_003669239.1|	-	1.5e-17	64.1	0.0	1.7e-17	64.0	0.0	1.0	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.23	gi|297527215|ref|YP_003669239.1|	-	4.1e-16	59.1	0.2	4.7e-16	59.0	0.1	1.1	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
vWA-TerF-like	PF10138.4	gi|297527215|ref|YP_003669239.1|	-	0.012	15.4	0.0	0.021	14.6	0.0	1.3	1	1	0	1	1	1	0	vWA	found	in	TerF	C	terminus
VWA_3	PF13768.1	gi|297527215|ref|YP_003669239.1|	-	0.061	13.0	0.0	0.73	9.5	0.0	2.0	1	1	0	1	1	1	0	von	Willebrand	factor	type	A	domain
RHH_1	PF01402.16	gi|297527216|ref|YP_003669240.1|	-	0.0027	17.5	1.1	0.01	15.7	0.6	2.1	2	0	0	2	2	2	1	Ribbon-helix-helix	protein,	copG	family
UPF0175	PF03683.8	gi|297527216|ref|YP_003669240.1|	-	0.011	15.1	0.1	0.033	13.6	0.1	1.7	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0175)
RHH_2	PF03693.9	gi|297527216|ref|YP_003669240.1|	-	0.13	12.4	0.1	0.26	11.4	0.1	1.5	1	0	0	1	1	1	0	Uncharacterised	protein	family	(UPF0156)
Peptidase_S8	PF00082.17	gi|297527217|ref|YP_003669241.1|	-	5.6e-22	78.2	21.3	1.9e-21	76.4	14.8	1.9	1	1	0	1	1	1	1	Subtilase	family
DUF4625	PF15418.1	gi|297527217|ref|YP_003669241.1|	-	0.0031	17.6	0.0	0.48	10.5	0.0	2.5	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4625)
BACON	PF13004.2	gi|297527217|ref|YP_003669241.1|	-	0.02	15.1	0.1	0.02	15.1	0.1	3.1	3	0	0	3	3	3	0	Bacteroidetes-Associated	Carbohydrate-binding	Often	N-terminal
FG-GAP	PF01839.18	gi|297527217|ref|YP_003669241.1|	-	0.4	10.4	7.8	0.39	10.4	0.5	3.5	3	0	0	3	3	3	0	FG-GAP	repeat
VCBS	PF13517.1	gi|297527217|ref|YP_003669241.1|	-	0.58	10.5	7.9	3.7	7.9	2.3	3.8	3	1	1	4	4	4	0	Repeat	domain	in	Vibrio,	Colwellia,	Bradyrhizobium	and	Shewanella
Baculo_PEP_C	PF04513.7	gi|297527218|ref|YP_003669242.1|	-	5.3e-07	29.5	26.8	1.1e-05	25.2	1.9	3.3	1	1	2	3	3	3	2	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
Reo_sigmaC	PF04582.7	gi|297527218|ref|YP_003669242.1|	-	7e-06	25.4	21.1	0.0039	16.4	1.6	2.2	1	1	1	2	2	2	2	Reovirus	sigma	C	capsid	protein
DUF948	PF06103.6	gi|297527218|ref|YP_003669242.1|	-	0.0003	20.6	8.0	0.32	10.8	1.3	3.8	2	1	1	3	3	3	1	Bacterial	protein	of	unknown	function	(DUF948)
HSBP1	PF06825.7	gi|297527218|ref|YP_003669242.1|	-	0.0003	20.2	0.6	0.53	9.8	0.0	3.9	2	2	0	2	2	2	1	Heat	shock	factor	binding	protein	1
SF-assemblin	PF06705.6	gi|297527218|ref|YP_003669242.1|	-	0.0059	15.7	0.2	0.033	13.3	0.0	2.0	1	1	1	2	2	2	1	SF-assemblin/beta	giardin
Laminin_II	PF06009.7	gi|297527218|ref|YP_003669242.1|	-	0.01	15.5	6.1	0.043	13.5	0.5	3.0	1	1	2	3	3	3	0	Laminin	Domain	II
MitMem_reg	PF13012.1	gi|297527218|ref|YP_003669242.1|	-	0.011	15.8	1.3	1.6	8.8	0.1	3.0	2	2	0	2	2	2	0	Maintenance	of	mitochondrial	structure	and	function
DUF4349	PF14257.1	gi|297527218|ref|YP_003669242.1|	-	0.017	14.3	0.0	1.3	8.1	0.0	2.4	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4349)
Fib_alpha	PF08702.5	gi|297527218|ref|YP_003669242.1|	-	0.02	15.0	1.4	5.2	7.1	0.1	2.5	2	1	0	2	2	2	0	Fibrinogen	alpha/beta	chain	family
DUF1664	PF07889.7	gi|297527218|ref|YP_003669242.1|	-	0.033	13.9	7.0	21	4.9	0.1	4.1	1	1	2	4	4	4	0	Protein	of	unknown	function	(DUF1664)
FlaC_arch	PF05377.6	gi|297527218|ref|YP_003669242.1|	-	0.062	13.1	3.1	13	5.7	0.1	4.0	3	1	1	4	4	4	0	Flagella	accessory	protein	C	(FlaC)
COG2	PF06148.6	gi|297527218|ref|YP_003669242.1|	-	0.083	12.7	1.6	3	7.7	0.0	3.0	1	1	1	2	2	2	0	COG	(conserved	oligomeric	Golgi)	complex	component,	COG2
WXG100	PF06013.7	gi|297527218|ref|YP_003669242.1|	-	0.099	12.6	0.0	34	4.5	0.0	3.3	2	2	0	3	3	3	0	Proteins	of	100	residues	with	WXG
Syntaxin	PF00804.20	gi|297527218|ref|YP_003669242.1|	-	0.15	12.2	1.8	5.4	7.2	0.2	3.0	1	1	1	3	3	3	0	Syntaxin
NPV_P10	PF05531.7	gi|297527218|ref|YP_003669242.1|	-	0.24	11.6	18.2	7.7	6.8	0.2	4.9	2	2	2	4	4	4	0	Nucleopolyhedrovirus	P10	protein
Allexi_40kDa	PF05549.6	gi|297527218|ref|YP_003669242.1|	-	0.32	10.2	2.0	0.8	8.9	0.2	2.1	1	1	1	2	2	2	0	Allexivirus	40kDa	protein
SNARE	PF05739.14	gi|297527218|ref|YP_003669242.1|	-	0.9	9.2	2.7	79	3.0	0.1	3.8	3	2	0	3	3	3	0	SNARE	domain
Pox_I5	PF04713.7	gi|297527220|ref|YP_003669244.1|	-	0.094	12.4	0.3	0.17	11.6	0.2	1.4	1	0	0	1	1	1	0	Poxvirus	protein	I5
Ribosomal_S25	PF03297.10	gi|297527222|ref|YP_003669246.1|	-	0.088	12.8	0.0	0.09	12.8	0.0	1.1	1	0	0	1	1	1	0	S25	ribosomal	protein
DUF1614	PF07758.6	gi|297527223|ref|YP_003669247.1|	-	2.3e-44	151.2	17.7	3e-44	150.8	12.3	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1614)
G_glu_transpept	PF01019.16	gi|297527224|ref|YP_003669248.1|	-	1.6e-108	363.4	0.0	1.8e-108	363.2	0.0	1.0	1	0	0	1	1	1	1	Gamma-glutamyltranspeptidase
Peptidase_C39	PF03412.10	gi|297527224|ref|YP_003669248.1|	-	0.048	13.4	0.1	1.3	8.7	0.0	2.5	3	0	0	3	3	3	0	Peptidase	C39	family
TauE	PF01925.14	gi|297527225|ref|YP_003669249.1|	-	5.6e-45	153.6	30.8	6.5e-45	153.4	21.3	1.0	1	0	0	1	1	1	1	Sulfite	exporter	TauE/SafE
Aldo_ket_red	PF00248.16	gi|297527226|ref|YP_003669250.1|	-	1.7e-59	201.0	0.3	2e-59	200.7	0.2	1.1	1	0	0	1	1	1	1	Aldo/keto	reductase	family
Ribosomal_S2	PF00318.15	gi|297527226|ref|YP_003669250.1|	-	0.054	12.7	0.0	0.11	11.7	0.0	1.4	1	0	0	1	1	1	0	Ribosomal	protein	S2
DUF1804	PF08822.6	gi|297527227|ref|YP_003669251.1|	-	0.18	11.5	1.1	0.29	10.8	0.8	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1804)
DUF1492	PF07374.6	gi|297527227|ref|YP_003669251.1|	-	1.1	9.4	6.7	0.74	9.9	0.2	2.6	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF1492)
VWA_2	PF13519.1	gi|297527228|ref|YP_003669252.1|	-	6.3e-13	49.1	0.0	1.1e-12	48.4	0.0	1.3	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.23	gi|297527228|ref|YP_003669252.1|	-	3.7e-12	46.3	0.0	6.5e-12	45.5	0.0	1.4	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA_CoxE	PF05762.9	gi|297527228|ref|YP_003669252.1|	-	0.00077	18.6	0.0	0.022	13.8	0.0	2.1	2	0	0	2	2	2	1	VWA	domain	containing	CoxE-like	protein
VWA_3	PF13768.1	gi|297527228|ref|YP_003669252.1|	-	0.0019	17.8	0.0	0.0032	17.1	0.0	1.4	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
vWA-TerF-like	PF10138.4	gi|297527228|ref|YP_003669252.1|	-	0.0076	16.1	0.1	0.037	13.8	0.0	1.9	1	1	0	1	1	1	1	vWA	found	in	TerF	C	terminus
BIV_Env	PF05858.7	gi|297527228|ref|YP_003669252.1|	-	0.11	10.3	0.4	0.14	10.0	0.3	1.1	1	0	0	1	1	1	0	Bovine	immunodeficiency	virus	surface	protein	(SU)
VWA_2	PF13519.1	gi|297527229|ref|YP_003669253.1|	-	1.8e-22	80.2	0.0	2.3e-22	79.9	0.0	1.1	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA	PF00092.23	gi|297527229|ref|YP_003669253.1|	-	4.3e-14	52.6	0.0	6.5e-14	52.0	0.0	1.2	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
VWA_3	PF13768.1	gi|297527229|ref|YP_003669253.1|	-	0.00049	19.8	0.0	0.00083	19.0	0.0	1.4	1	0	0	1	1	1	1	von	Willebrand	factor	type	A	domain
DUF2201	PF09967.4	gi|297527229|ref|YP_003669253.1|	-	0.00073	19.5	0.0	0.0026	17.7	0.0	1.8	2	0	0	2	2	2	1	VWA-like	domain	(DUF2201)
VWA_CoxE	PF05762.9	gi|297527229|ref|YP_003669253.1|	-	0.025	13.7	0.0	0.039	13.0	0.0	1.4	1	0	0	1	1	1	0	VWA	domain	containing	CoxE-like	protein
CobT_C	PF11775.3	gi|297527229|ref|YP_003669253.1|	-	0.083	12.2	0.0	0.14	11.5	0.0	1.3	1	0	0	1	1	1	0	Cobalamin	biosynthesis	protein	CobT	VWA	domain
vWA-TerF-like	PF10138.4	gi|297527229|ref|YP_003669253.1|	-	0.11	12.2	0.1	4.2	7.1	0.1	2.2	1	1	0	1	1	1	0	vWA	found	in	TerF	C	terminus
Adenyl_transf	PF04439.7	gi|297527231|ref|YP_003669255.1|	-	0.0062	15.5	0.2	0.009	15.0	0.1	1.2	1	0	0	1	1	1	1	Streptomycin	adenylyltransferase
DUF1949	PF09186.6	gi|297527232|ref|YP_003669256.1|	-	0.15	11.6	0.2	0.26	10.9	0.1	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF1949)
AAA_3	PF07726.6	gi|297527233|ref|YP_003669257.1|	-	4.6e-55	184.7	0.2	2.7e-53	179.0	0.2	2.2	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_5	PF07728.9	gi|297527233|ref|YP_003669257.1|	-	1.6e-12	47.3	0.0	4.5e-12	45.8	0.0	1.8	2	0	0	2	2	2	1	AAA	domain	(dynein-related	subfamily)
AAA	PF00004.24	gi|297527233|ref|YP_003669257.1|	-	0.0001	22.5	0.0	0.00053	20.1	0.0	2.2	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sigma54_activat	PF00158.21	gi|297527233|ref|YP_003669257.1|	-	0.0002	20.8	0.0	0.00097	18.6	0.0	1.9	1	1	0	1	1	1	1	Sigma-54	interaction	domain
Mg_chelatase	PF01078.16	gi|297527233|ref|YP_003669257.1|	-	0.0022	17.2	0.0	0.39	9.8	0.0	2.2	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
MCM	PF00493.18	gi|297527233|ref|YP_003669257.1|	-	0.0045	15.8	0.5	3.8	6.2	0.2	3.0	2	1	0	2	2	2	2	MCM2/3/5	family
RuvB_N	PF05496.7	gi|297527233|ref|YP_003669257.1|	-	0.0078	15.2	0.0	0.081	11.9	0.0	2.1	2	0	0	2	2	2	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_17	PF13207.1	gi|297527233|ref|YP_003669257.1|	-	0.054	14.3	0.0	0.3	11.8	0.0	2.1	2	1	0	2	2	2	0	AAA	domain
AAA_16	PF13191.1	gi|297527233|ref|YP_003669257.1|	-	0.085	12.8	0.0	0.18	11.8	0.0	1.5	1	0	0	1	1	1	0	AAA	ATPase	domain
PRC	PF05239.11	gi|297527234|ref|YP_003669258.1|	-	0.93	9.4	7.5	1.5	8.7	0.3	3.5	3	1	0	3	3	3	0	PRC-barrel	domain
DUF58	PF01882.13	gi|297527235|ref|YP_003669259.1|	-	2.5e-14	53.1	0.0	4.4e-14	52.3	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF58
KaiC	PF06745.8	gi|297527237|ref|YP_003669261.1|	-	1.5e-29	102.7	2.7	3.6e-25	88.4	0.1	2.1	2	0	0	2	2	2	2	KaiC
AAA_25	PF13481.1	gi|297527237|ref|YP_003669261.1|	-	4e-11	42.6	0.0	5.2e-10	39.0	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
AAA_14	PF13173.1	gi|297527237|ref|YP_003669261.1|	-	2.9e-07	30.4	0.0	0.02	14.7	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
UPF0079	PF02367.12	gi|297527237|ref|YP_003669261.1|	-	6e-06	25.9	0.5	0.07	12.7	0.0	2.5	2	0	0	2	2	2	2	Uncharacterised	P-loop	hydrolase	UPF0079
IstB_IS21	PF01695.12	gi|297527237|ref|YP_003669261.1|	-	1.1e-05	24.9	0.1	0.00026	20.4	0.0	2.7	3	0	0	3	3	3	1	IstB-like	ATP	binding	protein
AAA_29	PF13555.1	gi|297527237|ref|YP_003669261.1|	-	0.00011	21.7	3.8	0.011	15.2	0.4	3.3	3	0	0	3	3	3	1	P-loop	containing	region	of	AAA	domain
AAA_16	PF13191.1	gi|297527237|ref|YP_003669261.1|	-	0.00018	21.5	0.0	0.16	11.9	0.0	2.3	2	0	0	2	2	2	2	AAA	ATPase	domain
DUF2075	PF09848.4	gi|297527237|ref|YP_003669261.1|	-	0.00019	20.5	0.0	0.0011	18.0	0.0	1.9	2	0	0	2	2	2	1	Uncharacterized	conserved	protein	(DUF2075)
DnaB_C	PF03796.10	gi|297527237|ref|YP_003669261.1|	-	0.0002	20.3	0.0	0.00036	19.4	0.0	1.4	1	0	0	1	1	1	1	DnaB-like	helicase	C	terminal	domain
AAA_19	PF13245.1	gi|297527237|ref|YP_003669261.1|	-	0.00021	20.9	0.2	0.9	9.3	0.0	2.7	2	0	0	2	2	2	2	Part	of	AAA	domain
AAA_24	PF13479.1	gi|297527237|ref|YP_003669261.1|	-	0.00023	20.8	0.2	0.019	14.5	0.0	3.1	3	0	0	3	3	3	1	AAA	domain
AAA_22	PF13401.1	gi|297527237|ref|YP_003669261.1|	-	0.00029	20.9	0.0	0.084	13.0	0.0	2.7	2	1	0	2	2	2	1	AAA	domain
NACHT	PF05729.7	gi|297527237|ref|YP_003669261.1|	-	0.00084	19.0	0.1	0.45	10.1	0.0	2.6	3	0	0	3	3	2	1	NACHT	domain
ABC_tran	PF00005.22	gi|297527237|ref|YP_003669261.1|	-	0.00091	19.5	0.1	0.13	12.5	0.0	2.5	2	0	0	2	2	2	1	ABC	transporter
SRP54	PF00448.17	gi|297527237|ref|YP_003669261.1|	-	0.0049	16.3	0.0	0.26	10.7	0.0	2.3	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
AAA_10	PF12846.2	gi|297527237|ref|YP_003669261.1|	-	0.0069	15.8	0.2	0.45	9.9	0.0	2.2	2	0	0	2	2	2	1	AAA-like	domain
DUF258	PF03193.11	gi|297527237|ref|YP_003669261.1|	-	0.0094	15.1	0.3	2.2	7.4	0.1	2.5	2	0	0	2	2	2	1	Protein	of	unknown	function,	DUF258
T2SE	PF00437.15	gi|297527237|ref|YP_003669261.1|	-	0.011	14.7	0.6	0.88	8.4	0.0	2.3	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
GvpD	PF07088.6	gi|297527237|ref|YP_003669261.1|	-	0.017	13.4	0.3	0.21	9.8	0.2	2.3	1	1	0	1	1	1	0	GvpD	gas	vesicle	protein
Zeta_toxin	PF06414.7	gi|297527237|ref|YP_003669261.1|	-	0.021	13.8	0.1	4.5	6.3	0.0	2.4	2	0	0	2	2	2	0	Zeta	toxin
ArsA_ATPase	PF02374.10	gi|297527237|ref|YP_003669261.1|	-	0.026	13.5	0.0	0.048	12.6	0.0	1.3	1	0	0	1	1	1	0	Anion-transporting	ATPase
CbiA	PF01656.18	gi|297527237|ref|YP_003669261.1|	-	0.035	13.5	0.3	0.096	12.0	0.2	1.7	1	1	0	1	1	1	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
Sigma54_activat	PF00158.21	gi|297527237|ref|YP_003669261.1|	-	0.047	13.1	0.1	1.4	8.3	0.0	2.9	3	0	0	3	3	3	0	Sigma-54	interaction	domain
ArgK	PF03308.11	gi|297527237|ref|YP_003669261.1|	-	0.051	12.3	0.2	10	4.8	0.0	2.8	3	0	0	3	3	3	0	ArgK	protein
cobW	PF02492.14	gi|297527237|ref|YP_003669261.1|	-	0.057	12.8	4.4	3.1	7.1	0.1	2.4	2	0	0	2	2	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
PRK	PF00485.13	gi|297527237|ref|YP_003669261.1|	-	0.065	12.7	0.4	0.51	9.8	0.0	2.5	2	1	1	3	3	3	0	Phosphoribulokinase	/	Uridine	kinase	family
FtsK_SpoIIIE	PF01580.13	gi|297527237|ref|YP_003669261.1|	-	0.065	12.6	0.2	3.2	7.1	0.1	3.0	3	0	0	3	3	3	0	FtsK/SpoIIIE	family
Bac_DnaA	PF00308.13	gi|297527237|ref|YP_003669261.1|	-	0.11	12.1	0.0	0.29	10.7	0.0	1.7	2	0	0	2	2	1	0	Bacterial	dnaA	protein
AAA_31	PF13614.1	gi|297527237|ref|YP_003669261.1|	-	0.11	12.4	0.0	0.25	11.2	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
APS_kinase	PF01583.15	gi|297527237|ref|YP_003669261.1|	-	0.12	12.0	0.1	1.1	8.9	0.0	2.4	3	0	0	3	3	3	0	Adenylylsulphate	kinase
AAA_17	PF13207.1	gi|297527237|ref|YP_003669261.1|	-	0.13	13.1	1.5	15	6.3	0.4	3.3	3	0	0	3	3	2	0	AAA	domain
AAA_15	PF13175.1	gi|297527237|ref|YP_003669261.1|	-	0.13	11.2	5.8	0.08	11.9	2.7	1.7	1	1	0	1	1	1	0	AAA	ATPase	domain
ResIII	PF04851.10	gi|297527237|ref|YP_003669261.1|	-	0.15	11.8	0.1	1	9.1	0.0	2.1	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
CTP-dep_RFKase	PF01982.11	gi|297527238|ref|YP_003669262.1|	-	2.8e-30	104.4	0.1	3.2e-30	104.2	0.1	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF120
AFOR_C	PF01314.13	gi|297527239|ref|YP_003669263.1|	-	7.5e-121	403.3	0.3	8.9e-121	403.1	0.2	1.1	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	domains	2	&	3
AFOR_N	PF02730.10	gi|297527239|ref|YP_003669263.1|	-	1.9e-78	262.4	0.0	2.9e-78	261.8	0.0	1.3	1	0	0	1	1	1	1	Aldehyde	ferredoxin	oxidoreductase,	N-terminal	domain
SAM_adeno_trans	PF01887.11	gi|297527242|ref|YP_003669266.1|	-	1.4e-93	312.7	0.0	1.6e-93	312.5	0.0	1.0	1	0	0	1	1	1	1	S-adenosyl-l-methionine	hydroxide	adenosyltransferase
Cas_Cas4	PF01930.12	gi|297527243|ref|YP_003669267.1|	-	2.5e-07	30.7	3.1	6e-07	29.5	2.2	1.7	1	1	0	1	1	1	1	Domain	of	unknown	function	DUF83
PDDEXK_1	PF12705.2	gi|297527243|ref|YP_003669267.1|	-	4.3e-06	26.3	10.3	0.00034	20.0	5.1	2.9	1	1	1	2	2	2	2	PD-(D/E)XK	nuclease	superfamily
PDDEXK_3	PF13366.1	gi|297527243|ref|YP_003669267.1|	-	6.4e-06	26.2	0.3	1.1e-05	25.3	0.2	1.5	1	0	0	1	1	1	1	PD-(D/E)XK	nuclease	superfamily
DUF911	PF06023.7	gi|297527243|ref|YP_003669267.1|	-	0.021	14.0	0.4	0.045	12.9	0.3	1.6	1	1	0	1	1	1	0	Archaeal	protein	of	unknown	function	(DUF911)
Dna2	PF08696.6	gi|297527243|ref|YP_003669267.1|	-	0.028	13.7	0.0	0.2	10.9	0.0	2.2	1	1	2	3	3	3	0	DNA	replication	factor	Dna2
DUF3799	PF12684.2	gi|297527243|ref|YP_003669267.1|	-	0.089	12.1	2.3	0.27	10.5	0.0	2.4	2	1	1	3	3	3	0	PDDEXK-like	domain	of	unknown	function	(DUF3799)
KIAA1328	PF15369.1	gi|297527243|ref|YP_003669267.1|	-	0.12	12.1	1.4	0.19	11.5	1.0	1.2	1	0	0	1	1	1	0	Uncharacterised	protein	KIAA1328
Exo5	PF09810.4	gi|297527243|ref|YP_003669267.1|	-	1.9	7.6	7.0	12	5.0	1.8	2.2	2	1	0	2	2	2	0	Exonuclease	V	-	a	5'	deoxyribonuclease
NUDIX	PF00293.23	gi|297527244|ref|YP_003669268.1|	-	3.2e-21	75.3	0.0	3.7e-21	75.1	0.0	1.0	1	0	0	1	1	1	1	NUDIX	domain
CYTH	PF01928.16	gi|297527245|ref|YP_003669269.1|	-	1.1e-25	90.3	1.5	1.6e-25	89.8	1.1	1.1	1	0	0	1	1	1	1	CYTH	domain
YcfA	PF07927.7	gi|297527245|ref|YP_003669269.1|	-	0.062	13.2	1.6	0.29	11.0	0.0	2.5	2	1	1	3	3	3	0	YcfA-like	protein
DUF4479	PF14794.1	gi|297527245|ref|YP_003669269.1|	-	0.12	11.9	0.0	0.2	11.1	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4479)
Hist_deacetyl	PF00850.14	gi|297527246|ref|YP_003669270.1|	-	2.6e-65	220.7	0.0	3.5e-65	220.3	0.0	1.1	1	0	0	1	1	1	1	Histone	deacetylase	domain
DHH	PF01368.15	gi|297527247|ref|YP_003669271.1|	-	1.4e-07	31.2	0.2	5.1e-07	29.4	0.1	1.9	2	1	0	2	2	2	1	DHH	family
NurA	PF09376.5	gi|297527250|ref|YP_003669274.1|	-	3e-09	36.7	1.5	5e-09	36.0	1.0	1.4	1	0	0	1	1	1	1	NurA	domain
AAA_10	PF12846.2	gi|297527251|ref|YP_003669275.1|	-	9.1e-25	87.7	0.1	2.9e-15	56.5	0.1	3.2	3	1	0	3	3	3	2	AAA-like	domain
DUF87	PF01935.12	gi|297527251|ref|YP_003669275.1|	-	3.7e-12	46.5	0.1	2.5e-11	43.8	0.0	2.4	2	1	0	2	2	2	1	Domain	of	unknown	function	DUF87
FtsK_SpoIIIE	PF01580.13	gi|297527251|ref|YP_003669275.1|	-	2.9e-09	36.6	0.0	1.6e-06	27.7	0.0	2.3	2	0	0	2	2	2	2	FtsK/SpoIIIE	family
AAA_22	PF13401.1	gi|297527251|ref|YP_003669275.1|	-	6.5e-07	29.5	0.0	0.0016	18.5	0.0	2.5	2	0	0	2	2	2	2	AAA	domain
AAA	PF00004.24	gi|297527251|ref|YP_003669275.1|	-	7.1e-07	29.4	0.2	0.0032	17.6	0.0	2.5	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
TrwB_AAD_bind	PF10412.4	gi|297527251|ref|YP_003669275.1|	-	1e-06	27.6	0.0	2.2e-06	26.5	0.0	1.4	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
Arch_ATPase	PF01637.13	gi|297527251|ref|YP_003669275.1|	-	2.8e-05	23.9	0.2	0.039	13.6	0.0	2.4	2	0	0	2	2	2	2	Archaeal	ATPase
DUF853	PF05872.7	gi|297527251|ref|YP_003669275.1|	-	3e-05	22.5	0.0	0.085	11.1	0.0	2.2	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
Zot	PF05707.7	gi|297527251|ref|YP_003669275.1|	-	0.00045	19.7	0.6	0.0019	17.6	0.0	2.1	2	0	0	2	2	2	1	Zonular	occludens	toxin	(Zot)
AAA_18	PF13238.1	gi|297527251|ref|YP_003669275.1|	-	0.0006	20.1	0.2	0.0024	18.1	0.0	2.1	2	0	0	2	2	1	1	AAA	domain
T2SE	PF00437.15	gi|297527251|ref|YP_003669275.1|	-	0.00061	18.7	0.0	0.0013	17.6	0.0	1.5	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_25	PF13481.1	gi|297527251|ref|YP_003669275.1|	-	0.0012	18.2	0.0	0.71	9.2	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
AAA_16	PF13191.1	gi|297527251|ref|YP_003669275.1|	-	0.0014	18.6	0.0	0.081	12.9	0.0	2.3	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_17	PF13207.1	gi|297527251|ref|YP_003669275.1|	-	0.0027	18.5	1.5	0.051	14.3	1.0	3.0	1	1	0	1	1	1	1	AAA	domain
AAA_28	PF13521.1	gi|297527251|ref|YP_003669275.1|	-	0.0028	17.6	0.0	0.0053	16.7	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|297527251|ref|YP_003669275.1|	-	0.0038	16.9	0.0	0.0084	15.8	0.0	1.5	1	0	0	1	1	1	1	Part	of	AAA	domain
NACHT	PF05729.7	gi|297527251|ref|YP_003669275.1|	-	0.0066	16.1	0.0	0.016	14.8	0.0	1.6	1	0	0	1	1	1	1	NACHT	domain
AAA_29	PF13555.1	gi|297527251|ref|YP_003669275.1|	-	0.0073	15.8	0.0	0.014	14.8	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_14	PF13173.1	gi|297527251|ref|YP_003669275.1|	-	0.0073	16.2	0.2	0.4	10.5	0.0	2.6	2	0	0	2	2	2	1	AAA	domain
DEAD	PF00270.24	gi|297527251|ref|YP_003669275.1|	-	0.0092	15.4	0.0	1.1	8.6	0.0	2.4	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
ResIII	PF04851.10	gi|297527251|ref|YP_003669275.1|	-	0.01	15.6	0.0	4.3	7.1	0.0	2.4	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
DUF2075	PF09848.4	gi|297527251|ref|YP_003669275.1|	-	0.011	14.7	0.0	0.7	8.8	0.0	2.2	2	0	0	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
Miro	PF08477.8	gi|297527251|ref|YP_003669275.1|	-	0.012	16.0	0.0	0.034	14.6	0.0	1.8	1	0	0	1	1	1	0	Miro-like	protein
Rib_5-P_isom_A	PF06026.9	gi|297527251|ref|YP_003669275.1|	-	0.019	14.3	0.0	0.046	13.0	0.0	1.6	1	0	0	1	1	1	0	Ribose	5-phosphate	isomerase	A	(phosphoriboisomerase	A)
AAA_23	PF13476.1	gi|297527251|ref|YP_003669275.1|	-	0.023	15.0	1.5	0.055	13.7	0.9	1.9	1	1	0	1	1	1	0	AAA	domain
ABC_tran	PF00005.22	gi|297527251|ref|YP_003669275.1|	-	0.023	14.9	0.0	0.07	13.4	0.0	1.7	2	0	0	2	2	1	0	ABC	transporter
Pox_A32	PF04665.7	gi|297527251|ref|YP_003669275.1|	-	0.025	13.8	0.2	0.046	13.0	0.1	1.3	1	0	0	1	1	1	0	Poxvirus	A32	protein
G-alpha	PF00503.15	gi|297527251|ref|YP_003669275.1|	-	0.027	13.1	0.1	0.045	12.4	0.0	1.2	1	0	0	1	1	1	0	G-protein	alpha	subunit
MobB	PF03205.9	gi|297527251|ref|YP_003669275.1|	-	0.029	14.0	0.1	0.059	13.0	0.0	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
cobW	PF02492.14	gi|297527251|ref|YP_003669275.1|	-	0.05	13.0	0.1	0.089	12.2	0.1	1.4	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_5	PF07728.9	gi|297527251|ref|YP_003669275.1|	-	0.066	12.9	0.1	0.19	11.4	0.0	1.8	2	0	0	2	2	1	0	AAA	domain	(dynein-related	subfamily)
AAA_33	PF13671.1	gi|297527251|ref|YP_003669275.1|	-	0.07	13.0	0.0	0.16	11.8	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
UPF0079	PF02367.12	gi|297527251|ref|YP_003669275.1|	-	0.08	12.5	0.0	0.16	11.6	0.0	1.4	1	0	0	1	1	1	0	Uncharacterised	P-loop	hydrolase	UPF0079
UvrD-helicase	PF00580.16	gi|297527251|ref|YP_003669275.1|	-	0.11	11.7	0.4	0.88	8.8	0.0	2.1	2	0	0	2	2	2	0	UvrD/REP	helicase	N-terminal	domain
CDP-OH_P_transf	PF01066.16	gi|297527252|ref|YP_003669276.1|	-	1.4e-15	57.4	9.2	1.4e-15	57.4	6.4	2.1	2	0	0	2	2	2	1	CDP-alcohol	phosphatidyltransferase
PalH	PF08733.5	gi|297527255|ref|YP_003669279.1|	-	0.064	12.0	13.2	0.094	11.5	9.2	1.3	1	0	0	1	1	1	0	PalH/RIM21
HTH_24	PF13412.1	gi|297527256|ref|YP_003669280.1|	-	0.0087	15.4	2.5	0.14	11.5	0.1	3.7	3	0	0	3	3	3	1	Winged	helix-turn-helix	DNA-binding
Sp100	PF03172.8	gi|297527256|ref|YP_003669280.1|	-	0.012	15.5	1.5	0.11	12.4	0.2	2.8	2	1	0	2	2	2	0	Sp100	domain
AIG1	PF04548.11	gi|297527256|ref|YP_003669280.1|	-	0.026	13.6	0.0	0.063	12.3	0.0	1.7	1	0	0	1	1	1	0	AIG1	family
IF2_N	PF04760.10	gi|297527256|ref|YP_003669280.1|	-	0.064	12.9	0.3	1.4	8.6	0.0	3.0	2	1	0	2	2	2	0	Translation	initiation	factor	IF-2,	N-terminal	region
HTH_10	PF04967.7	gi|297527256|ref|YP_003669280.1|	-	0.076	12.6	0.1	8.2	6.1	0.0	2.8	2	0	0	2	2	2	0	HTH	DNA	binding	domain
TrmB	PF01978.14	gi|297527256|ref|YP_003669280.1|	-	0.084	12.5	1.0	8.6	6.1	0.0	3.6	4	0	0	4	4	4	0	Sugar-specific	transcriptional	regulator	TrmB
HTH_36	PF13730.1	gi|297527256|ref|YP_003669280.1|	-	0.11	12.7	1.6	1	9.5	0.0	3.0	3	0	0	3	3	3	0	Helix-turn-helix	domain
HTH_19	PF12844.2	gi|297527256|ref|YP_003669280.1|	-	0.54	10.3	3.2	8.4	6.5	0.0	3.5	3	0	0	3	3	3	0	Helix-turn-helix	domain
NUDIX	PF00293.23	gi|297527257|ref|YP_003669281.1|	-	1.3e-18	66.9	0.0	1.6e-18	66.6	0.0	1.1	1	0	0	1	1	1	1	NUDIX	domain
ATP-synt_D	PF01813.12	gi|297527260|ref|YP_003669284.1|	-	5.8e-42	143.4	10.3	7e-42	143.2	7.1	1.1	1	0	0	1	1	1	1	ATP	synthase	subunit	D
DUF3964	PF13107.1	gi|297527260|ref|YP_003669284.1|	-	0.021	15.0	1.3	4.2	7.6	0.2	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3964)
DUF61	PF01886.11	gi|297527261|ref|YP_003669285.1|	-	2.4e-39	134.1	0.9	2.7e-39	134.0	0.6	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF61
ATP-synt_B	PF00430.13	gi|297527262|ref|YP_003669286.1|	-	6e-06	26.0	12.6	0.00041	20.1	4.3	2.0	2	0	0	2	2	2	2	ATP	synthase	B/B'	CF(0)
DUF3552	PF12072.3	gi|297527262|ref|YP_003669286.1|	-	3.2e-05	23.2	10.9	0.00033	19.9	3.5	2.1	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF3552)
DivIVA	PF05103.8	gi|297527262|ref|YP_003669286.1|	-	0.00011	22.2	9.9	0.016	15.2	2.4	2.1	2	0	0	2	2	2	2	DivIVA	protein
HrpE	PF06188.7	gi|297527262|ref|YP_003669286.1|	-	0.0028	17.4	6.3	0.016	14.9	3.6	2.0	1	1	1	2	2	2	1	HrpE/YscL/FliH	and	V-type	ATPase	subunit	E
Peptidase_M41	PF01434.13	gi|297527262|ref|YP_003669286.1|	-	0.017	14.6	9.2	0.18	11.2	0.3	2.1	1	1	1	2	2	2	0	Peptidase	family	M41
DUF883	PF05957.8	gi|297527262|ref|YP_003669286.1|	-	0.018	15.3	3.0	1.8	9.0	0.4	2.1	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF883)
DUF725	PF05267.7	gi|297527262|ref|YP_003669286.1|	-	0.045	13.6	0.9	0.49	10.3	0.1	2.0	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF725)
HAUS-augmin3	PF14932.1	gi|297527262|ref|YP_003669286.1|	-	0.077	12.1	5.8	0.09	11.9	4.0	1.1	1	0	0	1	1	1	0	HAUS	augmin-like	complex	subunit	3
vATP-synt_E	PF01991.13	gi|297527262|ref|YP_003669286.1|	-	0.087	12.0	19.5	0.13	11.5	7.2	2.1	2	0	0	2	2	2	0	ATP	synthase	(E/31	kDa)	subunit
CENP-F_N	PF10481.4	gi|297527262|ref|YP_003669286.1|	-	0.11	11.8	6.6	0.13	11.6	4.6	1.0	1	0	0	1	1	1	0	Cenp-F	N-terminal	domain
SpoU_sub_bind	PF08032.7	gi|297527262|ref|YP_003669286.1|	-	0.13	12.4	6.8	0.57	10.3	1.2	2.1	2	0	0	2	2	2	0	RNA	2'-O	ribose	methyltransferase	substrate	binding
RbsD_FucU	PF05025.8	gi|297527262|ref|YP_003669286.1|	-	0.19	12.0	6.6	0.22	11.8	1.8	1.9	1	1	1	2	2	2	0	RbsD	/	FucU	transport	protein	family
DUF948	PF06103.6	gi|297527262|ref|YP_003669286.1|	-	0.25	11.2	3.0	7.8	6.4	0.1	2.2	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
zf-C4H2	PF10146.4	gi|297527262|ref|YP_003669286.1|	-	0.37	10.7	9.4	0.53	10.2	6.5	1.2	1	0	0	1	1	1	0	Zinc	finger-containing	protein
Dpoe2NT	PF12213.3	gi|297527262|ref|YP_003669286.1|	-	0.39	10.6	3.9	1.5	8.7	0.2	2.5	2	1	0	2	2	2	0	DNA	polymerases	epsilon	N	terminal
GlutR_dimer	PF00745.15	gi|297527262|ref|YP_003669286.1|	-	0.48	10.4	10.8	1.5	8.8	0.6	2.1	2	0	0	2	2	2	0	Glutamyl-tRNAGlu	reductase,	dimerisation	domain
DUF3294	PF07957.6	gi|297527262|ref|YP_003669286.1|	-	0.51	9.8	7.6	0.2	11.1	1.9	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3294)
ISG65-75	PF11727.3	gi|297527262|ref|YP_003669286.1|	-	0.51	9.3	6.2	0.66	8.9	4.3	1.3	1	0	0	1	1	1	0	Invariant	surface	glycoprotein
FIVAR	PF07554.8	gi|297527262|ref|YP_003669286.1|	-	0.69	10.2	4.1	0.78	10.0	0.6	2.6	1	1	1	3	3	3	0	Uncharacterised	Sugar-binding	Domain
V-ATPase_G	PF03179.10	gi|297527262|ref|YP_003669286.1|	-	1.3	9.4	17.4	5.1	7.4	12.1	1.9	1	1	0	1	1	1	0	Vacuolar	(H+)-ATPase	G	subunit
YgaB	PF14182.1	gi|297527262|ref|YP_003669286.1|	-	1.5	9.1	11.6	0.17	12.1	3.8	2.0	1	1	1	2	2	2	0	YgaB-like	protein
DUF2634	PF10934.3	gi|297527262|ref|YP_003669286.1|	-	2.6	7.8	6.0	7.6	6.3	1.1	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2634)
V_ATPase_I	PF01496.14	gi|297527262|ref|YP_003669286.1|	-	3.1	5.5	5.8	3.2	5.4	4.0	1.0	1	0	0	1	1	1	0	V-type	ATPase	116kDa	subunit	family
V_ATPase_I	PF01496.14	gi|297527263|ref|YP_003669287.1|	-	1e-58	198.9	32.9	4.6e-31	107.4	6.6	4.0	2	1	1	3	3	3	3	V-type	ATPase	116kDa	subunit	family
DUF3538	PF12057.3	gi|297527263|ref|YP_003669287.1|	-	0.035	13.7	0.1	0.12	12.0	0.0	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF3538)
MCPsignal	PF00015.16	gi|297527263|ref|YP_003669287.1|	-	0.091	12.2	0.7	0.3	10.5	0.1	1.9	2	0	0	2	2	2	0	Methyl-accepting	chemotaxis	protein	(MCP)	signalling	domain
Baculo_PEP_C	PF04513.7	gi|297527263|ref|YP_003669287.1|	-	0.17	11.6	6.2	0.58	9.9	1.1	2.4	2	0	0	2	2	2	0	Baculovirus	polyhedron	envelope	protein,	PEP,	C	terminus
NPV_P10	PF05531.7	gi|297527263|ref|YP_003669287.1|	-	0.23	11.7	6.4	7.3	6.9	2.4	3.1	2	1	0	2	2	2	0	Nucleopolyhedrovirus	P10	protein
DUF1664	PF07889.7	gi|297527263|ref|YP_003669287.1|	-	0.39	10.5	12.0	0.41	10.4	1.3	2.9	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1664)
UBN2	PF14223.1	gi|297527263|ref|YP_003669287.1|	-	0.48	10.2	6.1	1.5	8.6	0.5	2.9	2	1	1	3	3	3	0	gag-polypeptide	of	LTR	copia-type
Laminin_II	PF06009.7	gi|297527263|ref|YP_003669287.1|	-	1.1	9.0	7.3	5.6	6.7	1.6	2.5	2	1	0	2	2	2	0	Laminin	Domain	II
Clusterin	PF01093.12	gi|297527263|ref|YP_003669287.1|	-	1.4	7.6	3.4	15	4.2	0.1	2.1	2	0	0	2	2	2	0	Clusterin
ATP-synt_C	PF00137.16	gi|297527264|ref|YP_003669288.1|	-	4e-20	71.4	24.4	5.9e-14	51.7	4.3	2.1	2	0	0	2	2	2	2	ATP	synthase	subunit	C
DUF2929	PF11151.3	gi|297527264|ref|YP_003669288.1|	-	1.8	8.7	6.3	1.4	9.0	0.2	2.7	2	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2929)
vATP-synt_E	PF01991.13	gi|297527265|ref|YP_003669289.1|	-	3.7e-21	75.3	19.7	4.4e-21	75.0	13.7	1.1	1	0	0	1	1	1	1	ATP	synthase	(E/31	kDa)	subunit
FliH	PF02108.11	gi|297527265|ref|YP_003669289.1|	-	0.00014	21.7	5.4	0.00033	20.5	0.1	2.3	1	1	1	2	2	2	1	Flagellar	assembly	protein	FliH
HrpE	PF06188.7	gi|297527265|ref|YP_003669289.1|	-	0.00038	20.2	11.5	0.012	15.3	8.0	2.6	1	1	0	1	1	1	1	HrpE/YscL/FliH	and	V-type	ATPase	subunit	E
ATP-synt_B	PF00430.13	gi|297527265|ref|YP_003669289.1|	-	0.00046	20.0	25.7	0.0037	17.0	8.2	3.2	2	1	1	3	3	3	2	ATP	synthase	B/B'	CF(0)
DivIVA	PF05103.8	gi|297527265|ref|YP_003669289.1|	-	0.00082	19.4	14.2	0.06	13.3	3.9	2.5	1	1	1	2	2	2	2	DivIVA	protein
DUF1778	PF08681.6	gi|297527265|ref|YP_003669289.1|	-	0.022	14.5	3.5	0.65	9.8	0.2	3.1	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF1778)
Activator-TraM	PF11657.3	gi|297527265|ref|YP_003669289.1|	-	0.064	12.7	10.1	0.016	14.6	4.8	1.7	2	0	0	2	2	2	0	Transcriptional	activator	TraM
DUF1068	PF06364.7	gi|297527265|ref|YP_003669289.1|	-	0.3	10.6	8.2	0.28	10.7	4.8	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF1068)
DUF3198	PF11433.3	gi|297527265|ref|YP_003669289.1|	-	0.45	10.4	0.0	0.45	10.4	0.0	4.1	3	2	1	4	4	4	0	Protein	of	unknown	function	(DUF3198)
BTV_NS2	PF04514.7	gi|297527265|ref|YP_003669289.1|	-	1.6	7.5	9.9	2	7.1	6.8	1.1	1	0	0	1	1	1	0	Bluetongue	virus	non-structural	protein	NS2
AAA_11	PF13086.1	gi|297527265|ref|YP_003669289.1|	-	3.4	7.1	8.2	2.1	7.8	4.5	1.7	2	0	0	2	2	2	0	AAA	domain
DUF3236	PF11576.3	gi|297527265|ref|YP_003669289.1|	-	4.9	6.5	8.6	4.2	6.7	1.7	2.5	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3236)
DUF883	PF05957.8	gi|297527265|ref|YP_003669289.1|	-	6.8	7.1	9.7	15	6.0	5.3	2.3	1	1	1	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF883)
GRIP	PF01465.15	gi|297527266|ref|YP_003669290.1|	-	0.044	13.2	0.8	0.32	10.5	0.2	2.4	2	0	0	2	2	2	0	GRIP	domain
DUF2407	PF10302.4	gi|297527266|ref|YP_003669290.1|	-	0.1	12.7	0.3	0.67	10.1	0.1	2.2	3	0	0	3	3	3	0	DUF2407	ubiquitin-like	domain
AF2331-like	PF14556.1	gi|297527267|ref|YP_003669291.1|	-	0.025	14.9	0.1	0.036	14.3	0.1	1.3	1	0	0	1	1	1	0	AF2331-like
ATP-synt_ab	PF00006.20	gi|297527268|ref|YP_003669292.1|	-	1.2e-88	296.2	0.0	1.6e-88	295.7	0.0	1.2	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_C	PF00306.22	gi|297527268|ref|YP_003669292.1|	-	4.5e-19	68.9	1.3	8.2e-19	68.1	0.9	1.4	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	chain,	C	terminal	domain
ATP-synt_ab_N	PF02874.18	gi|297527268|ref|YP_003669292.1|	-	1.1e-13	51.1	3.3	2.5e-13	50.0	2.3	1.7	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
DUF2085	PF09858.4	gi|297527268|ref|YP_003669292.1|	-	0.025	14.6	0.0	0.052	13.6	0.0	1.4	1	0	0	1	1	1	0	Predicted	membrane	protein	(DUF2085)
ATP-synt_ab	PF00006.20	gi|297527269|ref|YP_003669293.1|	-	4.2e-58	196.3	0.0	5.4e-58	196.0	0.0	1.1	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
ATP-synt_ab_C	PF00306.22	gi|297527269|ref|YP_003669293.1|	-	9.2e-14	51.8	0.0	1.9e-13	50.9	0.0	1.5	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	chain,	C	terminal	domain
HAS-barrel	PF09378.5	gi|297527269|ref|YP_003669293.1|	-	0.0003	20.6	0.6	0.00078	19.2	0.4	1.7	1	0	0	1	1	1	1	HAS	barrel	domain
ATP-synt_ab_N	PF02874.18	gi|297527269|ref|YP_003669293.1|	-	0.00037	20.6	0.8	0.00086	19.4	0.5	1.6	1	0	0	1	1	1	1	ATP	synthase	alpha/beta	family,	beta-barrel	domain
DUF561	PF04481.7	gi|297527269|ref|YP_003669293.1|	-	0.11	11.4	0.0	6.1	5.7	0.0	2.1	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF561)
Aldolase_II	PF00596.16	gi|297527270|ref|YP_003669294.1|	-	6.1e-35	120.4	0.0	6.9e-35	120.3	0.0	1.0	1	0	0	1	1	1	1	Class	II	Aldolase	and	Adducin	N-terminal	domain
Lactamase_B	PF00753.22	gi|297527271|ref|YP_003669295.1|	-	8.2e-13	48.4	0.3	9.5e-13	48.2	0.2	1.1	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|297527271|ref|YP_003669295.1|	-	3.3e-06	26.7	0.1	4.2e-06	26.4	0.1	1.3	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
ATP_bind_4	PF01902.12	gi|297527272|ref|YP_003669296.1|	-	3.6e-51	173.6	0.0	4.2e-51	173.3	0.0	1.0	1	0	0	1	1	1	1	ATP-binding	region
QueC	PF06508.8	gi|297527272|ref|YP_003669296.1|	-	0.032	13.5	0.1	0.091	12.0	0.0	1.8	1	1	1	2	2	2	0	Queuosine	biosynthesis	protein	QueC
XFP_N	PF09364.5	gi|297527273|ref|YP_003669297.1|	-	0.046	12.2	0.0	0.047	12.2	0.0	1.0	1	0	0	1	1	1	0	XFP	N-terminal	domain
HGTP_anticodon	PF03129.15	gi|297527274|ref|YP_003669298.1|	-	2.4e-22	78.6	0.1	5.2e-22	77.5	0.0	1.6	1	0	0	1	1	1	1	Anticodon	binding	domain
tRNA-synt_2b	PF00587.20	gi|297527274|ref|YP_003669298.1|	-	2.4e-18	66.2	0.8	4.4e-18	65.4	0.5	1.4	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
ProRS-C_1	PF09180.6	gi|297527274|ref|YP_003669298.1|	-	3.7e-05	23.5	0.0	0.00023	21.0	0.0	2.2	2	0	0	2	2	2	1	Prolyl-tRNA	synthetase,	C-terminal
Peptidase_M28	PF04389.12	gi|297527275|ref|YP_003669299.1|	-	1.4e-13	50.9	0.0	3.3e-13	49.7	0.0	1.6	1	1	0	1	1	1	1	Peptidase	family	M28
PA	PF02225.17	gi|297527275|ref|YP_003669299.1|	-	2.1e-06	27.3	0.0	7.3e-06	25.6	0.0	1.9	2	1	0	2	2	2	1	PA	domain
Peptidase_M20	PF01546.23	gi|297527275|ref|YP_003669299.1|	-	0.15	11.5	0.0	0.22	11.0	0.0	1.4	1	0	0	1	1	1	0	Peptidase	family	M20/M25/M40
Phage_integrase	PF00589.17	gi|297527277|ref|YP_003669301.1|	-	2e-37	128.5	0.1	2.9e-37	127.9	0.0	1.3	1	0	0	1	1	1	1	Phage	integrase	family
zf-ribbon_3	PF13248.1	gi|297527277|ref|YP_003669301.1|	-	9e-11	40.6	2.9	1.3e-10	40.1	2.0	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|297527277|ref|YP_003669301.1|	-	2.9e-10	39.2	1.7	4.5e-10	38.7	1.2	1.3	1	0	0	1	1	1	1	zinc-ribbon	domain
Phage_int_SAM_4	PF13495.1	gi|297527277|ref|YP_003669301.1|	-	4e-10	39.8	0.1	4.2e-08	33.4	0.0	2.5	1	1	1	2	2	2	1	Phage	integrase,	N-terminal	SAM-like	domain
UPF0547	PF10571.4	gi|297527277|ref|YP_003669301.1|	-	4.2e-10	39.1	2.3	6.5e-10	38.5	1.6	1.3	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
Phage_int_SAM_1	PF02899.12	gi|297527277|ref|YP_003669301.1|	-	8.5e-10	38.6	0.6	1.7e-08	34.4	0.3	2.7	2	1	1	3	3	3	1	Phage	integrase,	N-terminal	SAM-like	domain
DZR	PF12773.2	gi|297527277|ref|YP_003669301.1|	-	3.5e-07	29.9	0.4	5.8e-07	29.2	0.3	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
Integrase_1	PF12835.2	gi|297527277|ref|YP_003669301.1|	-	0.00025	20.8	0.0	0.00045	20.0	0.0	1.4	1	0	0	1	1	1	1	Integrase
Phage_int_SAM_3	PF14659.1	gi|297527277|ref|YP_003669301.1|	-	0.0024	18.0	0.0	0.011	16.0	0.0	2.2	2	0	0	2	2	1	1	Phage	integrase,	N-terminal	SAM-like	domain
Ribosomal_L32p	PF01783.18	gi|297527277|ref|YP_003669301.1|	-	0.0046	17.1	0.1	0.013	15.6	0.1	1.7	1	0	0	1	1	1	1	Ribosomal	L32p	protein	family
zf-NADH-PPase	PF09297.6	gi|297527277|ref|YP_003669301.1|	-	0.0073	15.8	0.7	0.57	9.7	0.0	2.3	2	0	0	2	2	2	1	NADH	pyrophosphatase	zinc	ribbon	domain
Rad50_zn_hook	PF04423.9	gi|297527277|ref|YP_003669301.1|	-	0.018	14.4	0.9	0.12	11.8	0.0	2.5	2	1	1	3	3	3	0	Rad50	zinc	hook	motif
DUF1610	PF07754.6	gi|297527277|ref|YP_003669301.1|	-	0.018	15.1	4.2	0.088	12.9	0.7	2.3	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
HHH_8	PF14716.1	gi|297527277|ref|YP_003669301.1|	-	0.019	15.1	0.1	0.047	13.8	0.1	1.6	1	0	0	1	1	1	0	Helix-hairpin-helix	domain
TF_Zn_Ribbon	PF08271.7	gi|297527277|ref|YP_003669301.1|	-	0.02	14.2	3.0	0.057	12.7	2.1	1.8	1	1	0	1	1	1	0	TFIIB	zinc-binding
OrfB_Zn_ribbon	PF07282.6	gi|297527277|ref|YP_003669301.1|	-	0.03	13.9	0.7	5	6.8	0.1	3.1	2	1	1	3	3	3	0	Putative	transposase	DNA-binding	domain
DUF2116	PF09889.4	gi|297527277|ref|YP_003669301.1|	-	0.049	13.4	1.5	0.09	12.5	0.4	1.8	2	0	0	2	2	2	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
Sgf11	PF08209.6	gi|297527277|ref|YP_003669301.1|	-	0.057	12.7	3.0	0.12	11.7	2.1	1.5	1	0	0	1	1	1	0	Sgf11	(transcriptional	regulation	protein)
CpXC	PF14353.1	gi|297527277|ref|YP_003669301.1|	-	0.071	13.0	0.3	0.19	11.6	0.3	1.7	1	1	0	1	1	1	0	CpXC	protein
Prok-RING_1	PF14446.1	gi|297527277|ref|YP_003669301.1|	-	0.14	11.8	0.2	0.21	11.3	0.2	1.2	1	0	0	1	1	1	0	Prokaryotic	RING	finger	family	1
GFA	PF04828.9	gi|297527277|ref|YP_003669301.1|	-	0.21	11.5	0.7	4.7	7.2	0.5	2.3	1	1	0	1	1	1	0	Glutathione-dependent	formaldehyde-activating	enzyme
zf-Mss51	PF13824.1	gi|297527277|ref|YP_003669301.1|	-	0.28	11.0	1.2	0.67	9.8	0.8	1.7	1	0	0	1	1	1	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
zf-ISL3	PF14690.1	gi|297527277|ref|YP_003669301.1|	-	0.29	11.2	3.8	15	5.7	0.2	3.4	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-C2HC_2	PF13913.1	gi|297527277|ref|YP_003669301.1|	-	0.91	9.2	4.7	1.2	8.8	0.1	2.4	2	0	0	2	2	2	0	zinc-finger	of	a	C2HC-type
Zn_Tnp_IS1595	PF12760.2	gi|297527277|ref|YP_003669301.1|	-	1.7	8.5	4.6	34	4.3	0.4	3.2	2	1	1	3	3	3	0	Transposase	zinc-ribbon	domain
DHHA1	PF02272.14	gi|297527278|ref|YP_003669302.1|	-	4.7e-12	45.4	0.1	9.7e-12	44.4	0.1	1.5	1	0	0	1	1	1	1	DHHA1	domain
DHH	PF01368.15	gi|297527278|ref|YP_003669302.1|	-	2.5e-09	36.9	0.0	3.6e-09	36.4	0.0	1.2	1	0	0	1	1	1	1	DHH	family
DUF2258	PF10015.4	gi|297527279|ref|YP_003669303.1|	-	6e-30	102.8	1.3	2.7e-29	100.7	0.2	2.2	2	0	0	2	2	2	1	Uncharacterized	protein	conserved	in	archaea	(DUF2258)
Spc42p	PF11544.3	gi|297527279|ref|YP_003669303.1|	-	0.16	11.9	1.7	0.37	10.7	0.1	2.4	2	0	0	2	2	2	0	Spindle	pole	body	component	Spc42p
DUF4096	PF13340.1	gi|297527281|ref|YP_003669305.1|	-	0.032	14.0	0.0	0.052	13.4	0.0	1.3	1	0	0	1	1	1	0	Putative	transposase	of	IS4/5	family	(DUF4096)
TrmB	PF01978.14	gi|297527282|ref|YP_003669306.1|	-	0.3	10.8	2.2	0.73	9.5	0.4	2.4	2	1	0	2	2	2	0	Sugar-specific	transcriptional	regulator	TrmB
bact-PGI_C	PF10432.4	gi|297527283|ref|YP_003669307.1|	-	1.7e-42	144.7	0.0	3e-42	143.9	0.0	1.4	1	0	0	1	1	1	1	Bacterial	phospho-glucose	isomerase	C-terminal	region
SIS	PF01380.17	gi|297527283|ref|YP_003669307.1|	-	1.3e-08	34.4	0.1	5.3e-08	32.5	0.0	2.0	2	1	1	3	3	3	1	SIS	domain
YppF	PF14178.1	gi|297527283|ref|YP_003669307.1|	-	0.054	13.0	0.0	0.13	11.8	0.0	1.5	1	0	0	1	1	1	0	YppF-like	protein
UbiA	PF01040.13	gi|297527284|ref|YP_003669308.1|	-	4.2e-30	104.8	20.8	5.4e-30	104.4	14.4	1.1	1	0	0	1	1	1	1	UbiA	prenyltransferase	family
GalP_UDP_transf	PF01087.17	gi|297527285|ref|YP_003669309.1|	-	1.2e-35	123.2	0.0	2e-35	122.5	0.0	1.3	1	0	0	1	1	1	1	Galactose-1-phosphate	uridyl	transferase,	N-terminal	domain
GalP_UDP_tr_C	PF02744.12	gi|297527285|ref|YP_003669309.1|	-	9.2e-15	54.5	0.2	1.6e-14	53.8	0.1	1.3	1	0	0	1	1	1	1	Galactose-1-phosphate	uridyl	transferase,	C-terminal	domain
DcpS_C	PF11969.3	gi|297527285|ref|YP_003669309.1|	-	2.1e-06	27.9	0.2	8.4e-05	22.7	0.2	2.2	2	0	0	2	2	2	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
HIT	PF01230.18	gi|297527285|ref|YP_003669309.1|	-	0.0041	17.6	0.1	0.22	12.0	0.0	2.2	2	0	0	2	2	2	1	HIT	domain
GHMP_kinases_N	PF00288.21	gi|297527286|ref|YP_003669310.1|	-	4.6e-15	55.4	0.2	4.6e-15	55.4	0.1	2.4	3	0	0	3	3	3	1	GHMP	kinases	N	terminal	domain
GalKase_gal_bdg	PF10509.4	gi|297527286|ref|YP_003669310.1|	-	7.5e-14	50.7	0.0	1.3e-13	50.0	0.0	1.4	1	0	0	1	1	1	1	Galactokinase	galactose-binding	signature
GHMP_kinases_C	PF08544.8	gi|297527286|ref|YP_003669310.1|	-	1.9e-12	47.2	0.1	4.1e-12	46.1	0.1	1.6	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
PaaX	PF07848.7	gi|297527286|ref|YP_003669310.1|	-	0.056	13.4	0.3	0.12	12.3	0.2	1.5	1	0	0	1	1	1	0	PaaX-like	protein
Hydrolase_3	PF08282.7	gi|297527287|ref|YP_003669311.1|	-	8.8e-29	100.8	0.2	2.4e-17	63.3	0.1	2.0	1	1	1	2	2	2	2	haloacid	dehalogenase-like	hydrolase
S6PP	PF05116.8	gi|297527287|ref|YP_003669311.1|	-	2.5e-11	43.3	0.0	8.8e-11	41.5	0.0	1.7	1	1	0	1	1	1	1	Sucrose-6F-phosphate	phosphohydrolase
Hydrolase	PF00702.21	gi|297527287|ref|YP_003669311.1|	-	1.9e-05	25.2	0.1	3.4	8.0	0.0	3.1	2	1	1	3	3	3	3	haloacid	dehalogenase-like	hydrolase
HAD	PF12710.2	gi|297527287|ref|YP_003669311.1|	-	3e-05	24.2	0.2	0.0079	16.3	0.1	2.6	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
HAD_2	PF13419.1	gi|297527287|ref|YP_003669311.1|	-	0.0013	18.9	1.6	0.21	11.7	1.1	3.4	1	1	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase_6	PF13344.1	gi|297527287|ref|YP_003669311.1|	-	0.0021	17.9	0.1	0.0056	16.5	0.0	1.8	2	0	0	2	2	2	1	Haloacid	dehalogenase-like	hydrolase
Trehalose_PPase	PF02358.11	gi|297527287|ref|YP_003669311.1|	-	0.11	11.3	0.1	0.41	9.5	0.1	1.9	1	1	0	1	1	1	0	Trehalose-phosphatase
Glyco_hydro_38	PF01074.17	gi|297527291|ref|YP_003669315.1|	-	7.2e-68	228.8	0.0	1.1e-67	228.1	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	hydrolases	family	38	N-terminal	domain
Glyco_hydro_38C	PF07748.8	gi|297527291|ref|YP_003669315.1|	-	2.5e-61	207.9	0.0	3.4e-61	207.4	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	hydrolases	family	38	C-terminal	domain
Alpha-mann_mid	PF09261.6	gi|297527291|ref|YP_003669315.1|	-	1.7e-17	63.3	0.0	4.1e-17	62.1	0.0	1.7	1	0	0	1	1	1	1	Alpha	mannosidase,	middle	domain
RHH_1	PF01402.16	gi|297527292|ref|YP_003669316.1|	-	1.1e-08	34.6	0.5	1.7e-08	33.9	0.4	1.3	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
RHH_3	PF12651.2	gi|297527292|ref|YP_003669316.1|	-	0.00029	20.5	0.6	0.00038	20.1	0.4	1.2	1	0	0	1	1	1	1	Ribbon-helix-helix	domain
RelB	PF04221.7	gi|297527292|ref|YP_003669316.1|	-	0.0047	16.6	0.1	0.0051	16.5	0.1	1.2	1	1	0	1	1	1	1	RelB	antitoxin
Lactamase_B	PF00753.22	gi|297527293|ref|YP_003669317.1|	-	4.3e-13	49.3	0.9	5.3e-13	49.0	0.6	1.1	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|297527293|ref|YP_003669317.1|	-	3.5e-09	36.4	0.0	4.6e-09	36.1	0.0	1.4	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Metallophos_2	PF12850.2	gi|297527293|ref|YP_003669317.1|	-	0.003	17.3	0.0	0.19	11.5	0.0	2.1	2	0	0	2	2	2	2	Calcineurin-like	phosphoesterase	superfamily	domain
Zip	PF02535.17	gi|297527294|ref|YP_003669318.1|	-	1e-25	90.4	16.5	1.4e-23	83.4	4.4	2.0	1	1	1	2	2	2	2	ZIP	Zinc	transporter
E1-E2_ATPase	PF00122.15	gi|297527294|ref|YP_003669318.1|	-	0.00027	20.0	0.9	0.022	13.8	0.0	2.5	2	1	1	3	3	3	2	E1-E2	ATPase
tRNA-synt_2c	PF01411.14	gi|297527295|ref|YP_003669319.1|	-	1.7e-09	36.5	0.8	1.7e-09	36.5	0.5	1.4	2	0	0	2	2	2	1	tRNA	synthetases	class	II	(A)
tRNA_SAD	PF07973.9	gi|297527295|ref|YP_003669319.1|	-	4.8e-09	35.9	0.1	9.2e-09	35.0	0.0	1.5	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
TFIIB	PF00382.14	gi|297527296|ref|YP_003669320.1|	-	9e-43	143.9	3.5	4.7e-22	77.5	0.1	2.3	2	0	0	2	2	2	2	Transcription	factor	TFIIB	repeat
TF_Zn_Ribbon	PF08271.7	gi|297527296|ref|YP_003669320.1|	-	6.5e-11	41.3	0.2	1e-10	40.7	0.2	1.3	1	0	0	1	1	1	1	TFIIB	zinc-binding
Cyclin_C	PF02984.14	gi|297527296|ref|YP_003669320.1|	-	9.5e-07	28.7	0.2	0.0045	16.9	0.0	2.4	1	1	1	2	2	2	2	Cyclin,	C-terminal	domain
Cyclin_N	PF00134.18	gi|297527296|ref|YP_003669320.1|	-	9.2e-06	25.2	0.0	0.029	13.9	0.1	2.3	1	1	1	2	2	2	2	Cyclin,	N-terminal	domain
Sigma70_r4	PF04545.11	gi|297527296|ref|YP_003669320.1|	-	5.3e-05	22.4	0.5	0.0018	17.5	0.2	3.1	2	1	0	2	2	2	1	Sigma-70,	region	4
HTH_Tnp_ISL3	PF13542.1	gi|297527296|ref|YP_003669320.1|	-	0.00018	20.5	0.4	0.22	10.7	0.1	2.8	2	0	0	2	2	2	2	Helix-turn-helix	domain	of	transposase	family	ISL3
HTH_AsnC-type	PF13404.1	gi|297527296|ref|YP_003669320.1|	-	0.003	17.0	0.1	0.021	14.3	0.0	2.5	2	0	0	2	2	2	1	AsnC-type	helix-turn-helix	domain
Sigma70_r4_2	PF08281.7	gi|297527296|ref|YP_003669320.1|	-	0.0096	15.3	0.2	0.098	12.1	0.1	2.7	1	1	1	2	2	2	1	Sigma-70,	region	4
HTH_8	PF02954.14	gi|297527296|ref|YP_003669320.1|	-	0.022	14.2	0.4	1	8.9	0.0	3.4	4	0	0	4	4	4	0	Bacterial	regulatory	protein,	Fis	family
HTH_24	PF13412.1	gi|297527296|ref|YP_003669320.1|	-	0.039	13.3	1.7	0.13	11.6	0.0	2.8	3	1	1	4	4	4	0	Winged	helix-turn-helix	DNA-binding
HTH_11	PF08279.7	gi|297527296|ref|YP_003669320.1|	-	0.043	13.4	0.2	0.16	11.6	0.0	2.0	2	0	0	2	2	2	0	HTH	domain
Rrf2	PF02082.15	gi|297527296|ref|YP_003669320.1|	-	0.23	11.5	1.6	6.2	7.0	0.1	3.1	1	1	2	3	3	3	0	Transcriptional	regulator
HTH_23	PF13384.1	gi|297527296|ref|YP_003669320.1|	-	0.25	11.0	0.1	0.25	11.0	0.1	3.8	4	1	0	4	4	4	0	Homeodomain-like	domain
SUI1	PF01253.17	gi|297527297|ref|YP_003669321.1|	-	1.2e-24	85.9	2.4	1.3e-24	85.7	1.6	1.1	1	0	0	1	1	1	1	Translation	initiation	factor	SUI1
Img2	PF05046.9	gi|297527297|ref|YP_003669321.1|	-	0.034	14.3	1.1	0.048	13.8	0.8	1.4	1	1	0	1	1	1	0	Mitochondrial	large	subunit	ribosomal	protein	(Img2)
DNA_RNApol_7kD	PF03604.8	gi|297527298|ref|YP_003669322.1|	-	2.9e-07	29.8	4.9	4.5e-06	26.0	3.4	2.0	1	1	0	1	1	1	1	DNA	directed	RNA	polymerase,	7	kDa	subunit
Zn-ribbon_8	PF09723.5	gi|297527298|ref|YP_003669322.1|	-	2.7e-05	24.0	0.9	3.7e-05	23.5	0.6	1.2	1	0	0	1	1	1	1	Zinc	ribbon	domain
zinc_ribbon_5	PF13719.1	gi|297527298|ref|YP_003669322.1|	-	4.8e-05	22.8	0.6	0.0002	20.8	0.4	1.9	1	1	0	1	1	1	1	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|297527298|ref|YP_003669322.1|	-	0.00012	21.6	0.8	0.00033	20.2	0.6	1.7	1	1	0	1	1	1	1	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|297527298|ref|YP_003669322.1|	-	0.00014	21.1	0.8	0.055	12.9	0.1	2.1	2	0	0	2	2	2	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|297527298|ref|YP_003669322.1|	-	0.00018	20.5	0.3	0.045	12.9	0.0	2.1	2	0	0	2	2	2	1	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.2	gi|297527298|ref|YP_003669322.1|	-	0.00026	20.7	3.0	0.017	14.9	0.0	2.1	2	0	0	2	2	2	1	Transposase	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|297527298|ref|YP_003669322.1|	-	0.0018	17.5	0.8	0.0023	17.2	0.6	1.2	1	0	0	1	1	1	1	TFIIB	zinc-binding
zf-C2H2	PF00096.21	gi|297527298|ref|YP_003669322.1|	-	0.0021	18.2	0.5	1.2	9.5	0.0	2.2	2	0	0	2	2	2	1	Zinc	finger,	C2H2	type
zf-CSL	PF05207.8	gi|297527298|ref|YP_003669322.1|	-	0.0022	17.4	0.7	0.0025	17.2	0.5	1.2	1	0	0	1	1	1	1	CSL	zinc	finger
CpXC	PF14353.1	gi|297527298|ref|YP_003669322.1|	-	0.0033	17.3	1.7	1.3	8.9	0.0	2.0	1	1	1	2	2	2	2	CpXC	protein
DZR	PF12773.2	gi|297527298|ref|YP_003669322.1|	-	0.0064	16.2	0.5	0.023	14.5	0.4	1.7	1	1	0	1	1	1	1	Double	zinc	ribbon
zf-Di19	PF05605.7	gi|297527298|ref|YP_003669322.1|	-	0.0066	16.5	0.3	1	9.5	0.0	2.1	2	0	0	2	2	2	1	Drought	induced	19	protein	(Di19),	zinc-binding
HypA	PF01155.14	gi|297527298|ref|YP_003669322.1|	-	0.0079	15.8	0.1	0.0081	15.8	0.1	1.2	1	0	0	1	1	1	1	Hydrogenase	expression/synthesis	hypA	family
zf-C2HC_2	PF13913.1	gi|297527298|ref|YP_003669322.1|	-	0.0081	15.8	3.9	1.1	8.9	0.4	2.3	2	0	0	2	2	2	2	zinc-finger	of	a	C2HC-type
zf-ISL3	PF14690.1	gi|297527298|ref|YP_003669322.1|	-	0.0094	15.9	3.3	0.054	13.5	0.3	2.1	1	1	1	2	2	2	1	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Cys_rich_CPXG	PF14255.1	gi|297527298|ref|YP_003669322.1|	-	0.0097	15.7	1.1	0.24	11.2	0.1	2.1	2	0	0	2	2	2	1	Cysteine-rich	CPXCG
UPF0547	PF10571.4	gi|297527298|ref|YP_003669322.1|	-	0.013	15.1	4.0	0.3	10.8	0.7	2.2	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
DUF329	PF03884.9	gi|297527298|ref|YP_003669322.1|	-	0.015	14.8	0.1	2.3	7.8	0.0	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF329)
zf-C2H2_4	PF13894.1	gi|297527298|ref|YP_003669322.1|	-	0.021	15.1	0.3	3.6	8.1	0.0	2.2	2	0	0	2	2	2	0	C2H2-type	zinc	finger
PyrI_C	PF02748.10	gi|297527298|ref|YP_003669322.1|	-	0.023	14.1	3.6	1.1	8.7	0.3	2.1	2	0	0	2	2	2	0	Aspartate	carbamoyltransferase	regulatory	chain,	metal	binding	domain
HNH	PF01844.18	gi|297527298|ref|YP_003669322.1|	-	0.025	14.4	0.8	4.8	7.1	0.1	2.1	2	0	0	2	2	2	0	HNH	endonuclease
TFIIS_C	PF01096.13	gi|297527298|ref|YP_003669322.1|	-	0.028	14.0	1.7	1.9	8.1	0.1	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zf-BED	PF02892.10	gi|297527298|ref|YP_003669322.1|	-	0.031	14.0	2.9	0.032	13.9	0.0	1.9	1	1	1	2	2	2	0	BED	zinc	finger
YhfH	PF14149.1	gi|297527298|ref|YP_003669322.1|	-	0.036	13.8	1.9	0.8	9.5	0.5	2.1	1	1	1	2	2	2	0	YhfH-like	protein
SprT-like	PF10263.4	gi|297527298|ref|YP_003669322.1|	-	0.047	13.3	0.7	0.05	13.2	0.5	1.1	1	0	0	1	1	1	0	SprT-like	family
DUF3268	PF11672.3	gi|297527298|ref|YP_003669322.1|	-	0.049	13.7	0.7	0.88	9.6	0.6	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3268)
zf-C4_Topoisom	PF01396.14	gi|297527298|ref|YP_003669322.1|	-	0.052	13.0	0.1	0.45	10.0	0.0	2.0	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
DiS_P_DiS	PF06750.8	gi|297527298|ref|YP_003669322.1|	-	0.057	13.2	0.3	0.065	13.0	0.2	1.2	1	0	0	1	1	1	0	Bacterial	Peptidase	A24	N-terminal	domain
Prok-RING_1	PF14446.1	gi|297527298|ref|YP_003669322.1|	-	0.058	13.1	1.3	1.3	8.8	1.1	2.0	1	1	1	2	2	2	0	Prokaryotic	RING	finger	family	1
zf-CHY	PF05495.7	gi|297527298|ref|YP_003669322.1|	-	0.062	13.4	0.2	0.075	13.2	0.1	1.1	1	0	0	1	1	1	0	CHY	zinc	finger
Sgf11	PF08209.6	gi|297527298|ref|YP_003669322.1|	-	0.065	12.5	3.4	2.5	7.4	0.1	2.1	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
Cren7	PF11520.3	gi|297527298|ref|YP_003669322.1|	-	0.076	12.6	0.0	4.4	7.0	0.0	2.1	1	1	1	2	2	2	0	Chromatin	protein	Cren7
PhnA_Zn_Ribbon	PF08274.7	gi|297527298|ref|YP_003669322.1|	-	0.076	12.8	0.4	0.76	9.6	0.3	2.0	1	1	0	1	1	1	0	PhnA	Zinc-Ribbon
FYVE	PF01363.16	gi|297527298|ref|YP_003669322.1|	-	0.078	12.8	0.3	0.085	12.7	0.2	1.1	1	0	0	1	1	1	0	FYVE	zinc	finger
Rubredoxin	PF00301.15	gi|297527298|ref|YP_003669322.1|	-	0.079	12.8	2.4	4.5	7.2	0.3	2.1	2	0	0	2	2	2	0	Rubredoxin
zf-NADH-PPase	PF09297.6	gi|297527298|ref|YP_003669322.1|	-	0.08	12.4	0.4	9.4	5.8	0.0	2.2	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
Lar_restr_allev	PF14354.1	gi|297527298|ref|YP_003669322.1|	-	0.085	13.1	0.9	0.24	11.7	0.6	1.7	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
Elf1	PF05129.8	gi|297527298|ref|YP_003669322.1|	-	0.097	12.3	0.2	0.16	11.6	0.1	1.5	1	1	0	1	1	1	0	Transcription	elongation	factor	Elf1	like
Ribosomal_L44	PF00935.14	gi|297527298|ref|YP_003669322.1|	-	0.11	12.5	1.2	5.8	6.9	0.1	2.0	2	0	0	2	2	2	0	Ribosomal	protein	L44
C1_1	PF00130.17	gi|297527298|ref|YP_003669322.1|	-	0.11	12.2	0.4	0.24	11.1	0.3	1.6	1	1	0	1	1	1	0	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
zf-AN1	PF01428.11	gi|297527298|ref|YP_003669322.1|	-	0.12	12.2	0.6	4.6	7.1	0.1	2.1	2	0	0	2	2	2	0	AN1-like	Zinc	finger
Desulfoferrod_N	PF06397.7	gi|297527298|ref|YP_003669322.1|	-	0.13	11.6	2.7	0.74	9.2	0.1	2.2	2	0	0	2	2	2	0	Desulfoferrodoxin,	N-terminal	domain
zf-H2C2_2	PF13465.1	gi|297527298|ref|YP_003669322.1|	-	0.14	12.4	3.4	2.7	8.4	0.1	2.1	2	0	0	2	2	2	0	Zinc-finger	double	domain
FYDLN_acid	PF09538.5	gi|297527298|ref|YP_003669322.1|	-	0.16	12.5	0.2	0.39	11.3	0.1	1.6	1	1	0	1	1	1	0	Protein	of	unknown	function	(FYDLN_acid)
zf-C2H2_6	PF13912.1	gi|297527298|ref|YP_003669322.1|	-	0.18	11.7	0.1	0.18	11.7	0.0	1.9	2	0	0	2	2	2	0	C2H2-type	zinc	finger
OrfB_Zn_ribbon	PF07282.6	gi|297527298|ref|YP_003669322.1|	-	0.22	11.2	2.1	1.5	8.5	1.4	2.0	1	1	0	1	1	1	0	Putative	transposase	DNA-binding	domain
zf-HIT	PF04438.11	gi|297527298|ref|YP_003669322.1|	-	0.22	11.1	6.4	0.56	9.8	0.3	2.1	2	0	0	2	2	2	0	HIT	zinc	finger
IBR	PF01485.16	gi|297527298|ref|YP_003669322.1|	-	0.23	11.3	2.1	5.1	7.0	0.0	2.0	1	1	0	2	2	2	0	IBR	domain
zf-Mss51	PF13824.1	gi|297527298|ref|YP_003669322.1|	-	0.23	11.3	3.1	3.6	7.5	0.1	2.1	1	1	1	2	2	2	0	Zinc-finger	of	mitochondrial	splicing	suppressor	51
Mu-like_Com	PF10122.4	gi|297527298|ref|YP_003669322.1|	-	0.23	10.5	1.1	6	6.0	0.0	2.1	2	0	0	2	2	2	0	Mu-like	prophage	protein	Com
DUF164	PF02591.10	gi|297527298|ref|YP_003669322.1|	-	0.28	11.0	2.0	0.47	10.3	1.4	1.4	1	1	0	1	1	1	0	Putative	zinc	ribbon	domain
Ribosomal_S14	PF00253.16	gi|297527298|ref|YP_003669322.1|	-	0.34	10.3	3.3	2	7.8	0.2	2.2	2	0	0	2	2	2	0	Ribosomal	protein	S14p/S29e
Zn_ribbon_recom	PF13408.1	gi|297527298|ref|YP_003669322.1|	-	0.57	10.4	5.5	2.3	8.5	0.4	2.1	1	1	1	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
Ribosomal_L37e	PF01907.14	gi|297527298|ref|YP_003669322.1|	-	1.1	9.0	6.4	5.3	6.9	4.5	1.9	1	1	0	1	1	1	0	Ribosomal	protein	L37e
zf-CHCC	PF10276.4	gi|297527298|ref|YP_003669322.1|	-	1.7	8.5	6.2	0.54	10.1	0.4	2.0	2	0	0	2	2	2	0	Zinc-finger	domain
Arginase	PF00491.16	gi|297527299|ref|YP_003669323.1|	-	2.6e-64	217.2	0.0	3e-64	216.9	0.0	1.0	1	0	0	1	1	1	1	Arginase	family
tRNA-synt_2b	PF00587.20	gi|297527300|ref|YP_003669324.1|	-	1.2e-52	178.0	0.1	2.3e-52	177.0	0.1	1.5	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|297527300|ref|YP_003669324.1|	-	1.1e-23	82.9	0.1	3.6e-23	81.3	0.1	1.9	1	0	0	1	1	1	1	Anticodon	binding	domain
Zn-ribbon_8	PF09723.5	gi|297527300|ref|YP_003669324.1|	-	0.025	14.5	0.3	1.9	8.5	0.0	2.4	2	0	0	2	2	2	0	Zinc	ribbon	domain
zf-C2H2	PF00096.21	gi|297527300|ref|YP_003669324.1|	-	0.12	12.8	1.9	16	6.0	0.0	3.2	3	0	0	3	3	3	0	Zinc	finger,	C2H2	type
DNA_RNApol_7kD	PF03604.8	gi|297527300|ref|YP_003669324.1|	-	0.28	10.6	1.6	1	8.9	0.1	2.3	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zinc_ribbon_5	PF13719.1	gi|297527300|ref|YP_003669324.1|	-	0.5	10.0	2.1	20	4.8	0.1	3.0	2	0	0	2	2	2	0	zinc-ribbon	domain
Antitoxin-MazE	PF04014.13	gi|297527301|ref|YP_003669325.1|	-	0.00051	19.6	0.1	0.0015	18.2	0.1	1.8	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
Rad60-SLD	PF11976.3	gi|297527301|ref|YP_003669325.1|	-	0.17	11.5	1.7	0.82	9.3	1.2	2.1	1	1	0	1	1	1	0	Ubiquitin-2	like	Rad60	SUMO-like
Thioredoxin_8	PF13905.1	gi|297527302|ref|YP_003669326.1|	-	0.032	14.3	0.3	0.057	13.5	0.2	1.5	1	1	0	1	1	1	0	Thioredoxin-like
Laminin_II	PF06009.7	gi|297527302|ref|YP_003669326.1|	-	0.081	12.6	0.2	0.25	11.0	0.0	1.8	1	1	1	2	2	2	0	Laminin	Domain	II
DUF4463	PF14703.1	gi|297527302|ref|YP_003669326.1|	-	0.15	12.5	0.9	0.25	11.8	0.6	1.7	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4463)
Radical_SAM	PF04055.16	gi|297527303|ref|YP_003669327.1|	-	2.6e-17	63.4	0.0	9.6e-17	61.6	0.0	1.9	1	1	1	2	2	2	1	Radical	SAM	superfamily
B12-binding	PF02310.14	gi|297527303|ref|YP_003669327.1|	-	1.3e-09	37.9	0.0	2.9e-09	36.8	0.0	1.5	1	0	0	1	1	1	1	B12	binding	domain
PhoU_div	PF01865.11	gi|297527304|ref|YP_003669328.1|	-	1.7e-10	40.4	2.5	6.2e-10	38.6	1.6	1.8	1	1	0	1	1	1	1	Protein	of	unknown	function	DUF47
PhoU	PF01895.14	gi|297527304|ref|YP_003669328.1|	-	0.00088	19.6	5.1	0.064	13.7	0.4	2.4	2	0	0	2	2	2	2	PhoU	domain
DUF4559	PF15112.1	gi|297527304|ref|YP_003669328.1|	-	0.027	13.6	0.4	0.027	13.6	0.3	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4559)
DUF257	PF03192.8	gi|297527304|ref|YP_003669328.1|	-	0.028	13.7	0.8	1.8	7.8	0.0	2.8	1	1	2	3	3	3	0	Pyrococcus	protein	of	unknown	function,	DUF257
DASH_Dad3	PF08656.5	gi|297527304|ref|YP_003669328.1|	-	1.7	8.4	4.8	1.7	8.3	0.9	2.8	2	1	0	2	2	2	0	DASH	complex	subunit	Dad3
DUF1268	PF06896.6	gi|297527304|ref|YP_003669328.1|	-	4.8	7.5	6.9	14	6.0	0.5	3.0	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1268)
tRNA_int_endo	PF01974.12	gi|297527305|ref|YP_003669329.1|	-	1.4e-24	85.7	0.1	2e-24	85.1	0.1	1.2	1	0	0	1	1	1	1	tRNA	intron	endonuclease,	catalytic	C-terminal	domain
tRNA_int_endo_N	PF02778.9	gi|297527305|ref|YP_003669329.1|	-	5e-15	54.7	0.2	8.1e-15	54.1	0.1	1.4	1	0	0	1	1	1	1	tRNA	intron	endonuclease,	N-terminal	domain
tRNA_int_end_N2	PF12928.2	gi|297527305|ref|YP_003669329.1|	-	0.039	13.4	0.0	0.066	12.6	0.0	1.4	1	0	0	1	1	1	0	tRNA-splicing	endonuclease	subunit	sen54	N-term
Flavoprotein	PF02441.14	gi|297527307|ref|YP_003669331.1|	-	7.9e-25	87.0	0.2	1.1e-24	86.5	0.1	1.1	1	0	0	1	1	1	1	Flavoprotein
KaiC	PF06745.8	gi|297527309|ref|YP_003669333.1|	-	6.9e-58	195.4	0.1	7.9e-58	195.2	0.1	1.0	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.1	gi|297527309|ref|YP_003669333.1|	-	5.4e-12	45.5	0.0	7.8e-12	45.0	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
GvpD	PF07088.6	gi|297527309|ref|YP_003669333.1|	-	2.1e-05	23.0	0.4	5.5e-05	21.6	0.2	1.7	1	1	0	1	1	1	1	GvpD	gas	vesicle	protein
RecA	PF00154.16	gi|297527309|ref|YP_003669333.1|	-	2.4e-05	23.5	0.1	3.5e-05	23.0	0.0	1.2	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
Rad51	PF08423.6	gi|297527309|ref|YP_003669333.1|	-	7.8e-05	21.6	0.1	0.00015	20.8	0.0	1.6	1	1	0	1	1	1	1	Rad51
AAA_22	PF13401.1	gi|297527309|ref|YP_003669333.1|	-	0.0012	19.0	0.0	0.0023	18.1	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
IstB_IS21	PF01695.12	gi|297527309|ref|YP_003669333.1|	-	0.0022	17.4	0.0	0.029	13.7	0.0	2.1	2	0	0	2	2	2	1	IstB-like	ATP	binding	protein
AAA_19	PF13245.1	gi|297527309|ref|YP_003669333.1|	-	0.0027	17.4	0.1	0.0066	16.1	0.1	1.6	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_10	PF12846.2	gi|297527309|ref|YP_003669333.1|	-	0.0069	15.8	0.0	0.013	14.9	0.0	1.4	1	1	0	1	1	1	1	AAA-like	domain
DUF2075	PF09848.4	gi|297527309|ref|YP_003669333.1|	-	0.011	14.6	0.0	0.02	13.9	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2075)
AAA_24	PF13479.1	gi|297527309|ref|YP_003669333.1|	-	0.014	14.9	0.0	0.024	14.2	0.0	1.5	1	1	0	1	1	1	0	AAA	domain
MEDS	PF14417.1	gi|297527309|ref|YP_003669333.1|	-	0.016	14.2	0.0	0.023	13.7	0.0	1.2	1	0	0	1	1	1	0	MEDS:	MEthanogen/methylotroph,	DcmR	Sensory	domain
AAA_14	PF13173.1	gi|297527309|ref|YP_003669333.1|	-	0.035	13.9	0.0	0.079	12.8	0.0	1.8	1	1	0	1	1	1	0	AAA	domain
T2SE	PF00437.15	gi|297527309|ref|YP_003669333.1|	-	0.052	12.4	0.0	0.086	11.7	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
DnaB_C	PF03796.10	gi|297527309|ref|YP_003669333.1|	-	0.075	11.8	0.0	0.11	11.4	0.0	1.3	1	0	0	1	1	1	0	DnaB-like	helicase	C	terminal	domain
MobB	PF03205.9	gi|297527309|ref|YP_003669333.1|	-	0.09	12.4	0.1	0.16	11.6	0.1	1.4	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Rotavirus_VP3	PF06929.6	gi|297527309|ref|YP_003669333.1|	-	0.17	9.7	0.2	0.23	9.3	0.1	1.1	1	0	0	1	1	1	0	Rotavirus	VP3	protein
AAA_17	PF13207.1	gi|297527309|ref|YP_003669333.1|	-	0.21	12.4	3.1	1.4	9.7	2.2	2.4	1	1	0	1	1	1	0	AAA	domain
Helicase_RecD	PF05127.9	gi|297527310|ref|YP_003669334.1|	-	1.7e-54	184.1	0.0	3e-54	183.3	0.0	1.4	1	0	0	1	1	1	1	Helicase
GNAT_acetyltr_2	PF13718.1	gi|297527310|ref|YP_003669334.1|	-	5.7e-49	166.1	0.0	3.1e-48	163.7	0.0	2.0	1	1	0	1	1	1	1	GNAT	acetyltransferase	2
DUF1726	PF08351.6	gi|297527310|ref|YP_003669334.1|	-	1e-27	95.6	0.0	3e-27	94.1	0.0	1.8	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF1726)
tRNA_bind_2	PF13725.1	gi|297527310|ref|YP_003669334.1|	-	7.2e-12	45.3	0.3	4.7e-10	39.4	0.0	2.7	3	0	0	3	3	3	1	Possible	tRNA	binding	domain
Acetyltransf_7	PF13508.1	gi|297527310|ref|YP_003669334.1|	-	6e-07	29.5	0.0	1.7e-06	28.1	0.0	1.8	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.19	gi|297527310|ref|YP_003669334.1|	-	3.1e-06	27.1	0.1	1.9e-05	24.5	0.0	2.4	3	0	0	3	3	3	1	Acetyltransferase	(GNAT)	family
AAA_11	PF13086.1	gi|297527310|ref|YP_003669334.1|	-	0.11	12.0	0.1	1.5	8.2	0.0	2.2	2	0	0	2	2	2	0	AAA	domain
AAA	PF00004.24	gi|297527311|ref|YP_003669335.1|	-	6.5e-99	327.2	0.0	1.3e-48	164.4	0.0	2.4	2	0	0	2	2	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
CDC48_N	PF02359.13	gi|297527311|ref|YP_003669335.1|	-	3.8e-29	100.4	0.9	1.9e-28	98.2	0.7	2.2	2	0	0	2	2	1	1	Cell	division	protein	48	(CDC48),	N-terminal	domain
RuvB_N	PF05496.7	gi|297527311|ref|YP_003669335.1|	-	4.7e-16	58.5	0.1	3.3e-08	32.8	0.0	2.8	2	2	0	2	2	2	2	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_2	PF07724.9	gi|297527311|ref|YP_003669335.1|	-	2.9e-15	56.6	0.0	9.7e-08	32.1	0.0	2.5	2	0	0	2	2	2	2	AAA	domain	(Cdc48	subfamily)
AAA_16	PF13191.1	gi|297527311|ref|YP_003669335.1|	-	6.8e-14	52.2	0.0	5.6e-07	29.7	0.0	2.7	2	0	0	2	2	2	2	AAA	ATPase	domain
AAA_22	PF13401.1	gi|297527311|ref|YP_003669335.1|	-	2.4e-13	50.3	0.4	5.8e-05	23.2	0.0	4.1	2	2	0	2	2	2	2	AAA	domain
TIP49	PF06068.8	gi|297527311|ref|YP_003669335.1|	-	4.8e-13	48.5	0.0	2.3e-05	23.2	0.0	2.4	2	0	0	2	2	2	2	TIP49	C-terminus
AAA_33	PF13671.1	gi|297527311|ref|YP_003669335.1|	-	1.4e-12	47.7	0.0	1.2e-05	25.1	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
AAA_17	PF13207.1	gi|297527311|ref|YP_003669335.1|	-	6.3e-12	46.3	0.0	1.2e-05	26.1	0.0	3.0	2	0	0	2	2	2	2	AAA	domain
AAA_5	PF07728.9	gi|297527311|ref|YP_003669335.1|	-	7.6e-12	45.1	0.5	7.8e-05	22.4	0.1	3.9	2	2	0	2	2	2	2	AAA	domain	(dynein-related	subfamily)
CDC48_2	PF02933.12	gi|297527311|ref|YP_003669335.1|	-	2.8e-11	42.8	0.5	4.3e-10	39.0	0.2	2.6	2	0	0	2	2	2	1	Cell	division	protein	48	(CDC48),	domain	2
AAA_14	PF13173.1	gi|297527311|ref|YP_003669335.1|	-	5e-10	39.3	0.0	5.9e-05	22.9	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
IstB_IS21	PF01695.12	gi|297527311|ref|YP_003669335.1|	-	1.2e-09	37.8	0.2	0.0012	18.3	0.0	2.5	2	0	0	2	2	2	2	IstB-like	ATP	binding	protein
Zeta_toxin	PF06414.7	gi|297527311|ref|YP_003669335.1|	-	2e-09	36.8	0.0	0.00061	18.9	0.0	2.5	2	0	0	2	2	2	2	Zeta	toxin
AAA_18	PF13238.1	gi|297527311|ref|YP_003669335.1|	-	5.4e-09	36.4	0.6	0.00096	19.4	0.0	3.5	4	0	0	4	4	2	2	AAA	domain
AAA_28	PF13521.1	gi|297527311|ref|YP_003669335.1|	-	1.3e-08	34.9	0.0	0.0025	17.7	0.0	2.6	2	0	0	2	2	2	2	AAA	domain
AAA_19	PF13245.1	gi|297527311|ref|YP_003669335.1|	-	2.5e-08	33.5	2.1	0.0033	17.1	0.1	3.1	2	0	0	2	2	2	2	Part	of	AAA	domain
RNA_helicase	PF00910.17	gi|297527311|ref|YP_003669335.1|	-	3.2e-07	30.4	0.0	0.0071	16.5	0.0	2.6	2	0	0	2	2	2	2	RNA	helicase
Vps4_C	PF09336.5	gi|297527311|ref|YP_003669335.1|	-	4.1e-07	29.7	0.1	0.0011	18.7	0.0	3.0	2	0	0	2	2	2	1	Vps4	C	terminal	oligomerisation	domain
Mg_chelatase	PF01078.16	gi|297527311|ref|YP_003669335.1|	-	4.2e-07	29.3	1.2	0.022	13.9	0.0	2.6	2	0	0	2	2	2	2	Magnesium	chelatase,	subunit	ChlI
AAA_25	PF13481.1	gi|297527311|ref|YP_003669335.1|	-	9.2e-07	28.4	9.7	0.033	13.5	0.2	4.2	3	2	1	4	4	3	3	AAA	domain
AAA_3	PF07726.6	gi|297527311|ref|YP_003669335.1|	-	3.3e-06	26.7	0.0	0.028	14.0	0.0	3.1	3	0	0	3	3	2	2	ATPase	family	associated	with	various	cellular	activities	(AAA)
Sigma54_activ_2	PF14532.1	gi|297527311|ref|YP_003669335.1|	-	3.9e-06	26.9	0.0	0.12	12.4	0.0	2.5	2	0	0	2	2	2	2	Sigma-54	interaction	domain
KaiC	PF06745.8	gi|297527311|ref|YP_003669335.1|	-	5.7e-06	25.6	0.2	0.16	11.0	0.0	3.6	4	0	0	4	4	3	2	KaiC
NACHT	PF05729.7	gi|297527311|ref|YP_003669335.1|	-	1.1e-05	25.0	2.8	0.12	12.0	0.1	4.0	4	0	0	4	4	4	1	NACHT	domain
Sigma54_activat	PF00158.21	gi|297527311|ref|YP_003669335.1|	-	1.2e-05	24.9	0.1	0.44	9.9	0.0	3.5	2	1	0	2	2	2	2	Sigma-54	interaction	domain
PhoH	PF02562.11	gi|297527311|ref|YP_003669335.1|	-	1.4e-05	24.4	0.7	0.097	11.8	0.1	2.7	2	0	0	2	2	2	2	PhoH-like	protein
Molydop_binding	PF01568.16	gi|297527311|ref|YP_003669335.1|	-	1.5e-05	24.7	0.1	5.2e-05	23.0	0.0	1.9	1	0	0	1	1	1	1	Molydopterin	dinucleotide	binding	domain
Arch_ATPase	PF01637.13	gi|297527311|ref|YP_003669335.1|	-	4.1e-05	23.4	0.2	0.03	14.0	0.0	3.4	2	2	2	4	4	4	2	Archaeal	ATPase
DUF2075	PF09848.4	gi|297527311|ref|YP_003669335.1|	-	4.5e-05	22.5	0.0	0.047	12.6	0.0	2.8	3	0	0	3	3	3	1	Uncharacterized	conserved	protein	(DUF2075)
ABC_tran	PF00005.22	gi|297527311|ref|YP_003669335.1|	-	4.7e-05	23.6	0.0	0.55	10.5	0.0	2.7	2	0	0	2	2	2	2	ABC	transporter
Bac_DnaA	PF00308.13	gi|297527311|ref|YP_003669335.1|	-	7.3e-05	22.5	0.0	0.01	15.5	0.0	2.8	3	0	0	3	3	2	1	Bacterial	dnaA	protein
UPF0079	PF02367.12	gi|297527311|ref|YP_003669335.1|	-	0.00011	21.8	0.0	0.19	11.3	0.0	2.7	2	0	0	2	2	2	2	Uncharacterised	P-loop	hydrolase	UPF0079
DUF815	PF05673.8	gi|297527311|ref|YP_003669335.1|	-	0.00013	20.9	0.0	0.44	9.4	0.0	2.5	2	0	0	2	2	2	2	Protein	of	unknown	function	(DUF815)
AAA_24	PF13479.1	gi|297527311|ref|YP_003669335.1|	-	0.00019	21.0	0.1	0.56	9.7	0.1	2.6	2	0	0	2	2	2	2	AAA	domain
T2SE	PF00437.15	gi|297527311|ref|YP_003669335.1|	-	0.00027	19.9	0.0	0.3	9.9	0.0	2.5	2	0	0	2	2	2	2	Type	II/IV	secretion	system	protein
Parvo_NS1	PF01057.12	gi|297527311|ref|YP_003669335.1|	-	0.00027	19.9	0.3	0.2	10.4	0.0	2.2	2	0	0	2	2	2	2	Parvovirus	non-structural	protein	NS1
AAA_11	PF13086.1	gi|297527311|ref|YP_003669335.1|	-	0.0004	20.0	0.0	0.38	10.3	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
ResIII	PF04851.10	gi|297527311|ref|YP_003669335.1|	-	0.0013	18.5	0.0	1.9	8.3	0.0	2.4	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
SKI	PF01202.17	gi|297527311|ref|YP_003669335.1|	-	0.0022	17.8	0.0	2.3	8.0	0.0	2.8	2	0	0	2	2	2	1	Shikimate	kinase
NB-ARC	PF00931.17	gi|297527311|ref|YP_003669335.1|	-	0.0027	16.6	0.0	1	8.1	0.0	2.4	2	0	0	2	2	2	1	NB-ARC	domain
AAA_30	PF13604.1	gi|297527311|ref|YP_003669335.1|	-	0.0062	16.1	0.1	2.6	7.5	0.0	2.7	2	0	0	2	2	2	1	AAA	domain
Viral_helicase1	PF01443.13	gi|297527311|ref|YP_003669335.1|	-	0.0081	15.7	0.0	3.6	7.0	0.0	2.2	2	0	0	2	2	2	0	Viral	(Superfamily	1)	RNA	helicase
AFG1_ATPase	PF03969.11	gi|297527311|ref|YP_003669335.1|	-	0.0083	14.9	0.0	2.6	6.7	0.0	3.3	4	1	0	4	4	3	0	AFG1-like	ATPase
ATP-synt_ab	PF00006.20	gi|297527311|ref|YP_003669335.1|	-	0.011	15.2	0.0	2.9	7.3	0.0	2.4	2	0	0	2	2	2	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
KTI12	PF08433.5	gi|297527311|ref|YP_003669335.1|	-	0.025	13.7	0.0	4.4	6.4	0.0	2.8	2	0	0	2	2	2	0	Chromatin	associated	protein	KTI12
PduV-EutP	PF10662.4	gi|297527311|ref|YP_003669335.1|	-	0.031	13.7	0.0	11	5.5	0.0	2.9	3	0	0	3	3	3	0	Ethanolamine	utilisation	-	propanediol	utilisation
IPT	PF01745.11	gi|297527311|ref|YP_003669335.1|	-	0.045	12.9	0.5	2.1	7.4	0.1	2.3	2	0	0	2	2	2	0	Isopentenyl	transferase
Rad17	PF03215.10	gi|297527311|ref|YP_003669335.1|	-	0.047	12.3	0.0	2.5	6.6	0.0	2.4	2	1	0	2	2	2	0	Rad17	cell	cycle	checkpoint	protein
Cytidylate_kin2	PF13189.1	gi|297527311|ref|YP_003669335.1|	-	0.049	13.5	0.0	1.7	8.5	0.0	2.3	2	0	0	2	2	2	0	Cytidylate	kinase-like	family
Guanylate_kin	PF00625.16	gi|297527311|ref|YP_003669335.1|	-	0.065	12.6	0.1	26	4.1	0.0	3.7	3	1	1	4	4	4	0	Guanylate	kinase
AAA_29	PF13555.1	gi|297527311|ref|YP_003669335.1|	-	0.077	12.5	0.0	8.5	5.9	0.0	2.5	2	0	0	2	2	2	0	P-loop	containing	region	of	AAA	domain
NTPase_1	PF03266.10	gi|297527311|ref|YP_003669335.1|	-	0.079	12.6	7.3	13	5.4	0.0	4.4	3	2	1	4	4	4	0	NTPase
Torsin	PF06309.6	gi|297527311|ref|YP_003669335.1|	-	0.089	12.6	0.0	2.2	8.1	0.0	2.4	2	0	0	2	2	2	0	Torsin
KAP_NTPase	PF07693.9	gi|297527311|ref|YP_003669335.1|	-	0.1	11.5	0.6	3	6.7	0.0	3.0	2	2	0	3	3	3	0	KAP	family	P-loop	domain
AAA_10	PF12846.2	gi|297527311|ref|YP_003669335.1|	-	0.1	12.0	0.4	16	4.7	0.0	3.4	2	1	1	3	3	3	0	AAA-like	domain
cobW	PF02492.14	gi|297527311|ref|YP_003669335.1|	-	0.22	10.9	1.2	25	4.2	0.1	2.8	3	0	0	3	3	2	0	CobW/HypB/UreG,	nucleotide-binding	domain
KaiC	PF06745.8	gi|297527312|ref|YP_003669336.1|	-	2.4e-86	288.5	0.0	2.7e-86	288.3	0.0	1.0	1	0	0	1	1	1	1	KaiC
AAA_25	PF13481.1	gi|297527312|ref|YP_003669336.1|	-	1.8e-10	40.5	0.0	2.3e-10	40.1	0.0	1.2	1	0	0	1	1	1	1	AAA	domain
GvpD	PF07088.6	gi|297527312|ref|YP_003669336.1|	-	5.3e-05	21.7	0.5	0.0015	16.9	0.1	2.0	2	0	0	2	2	2	2	GvpD	gas	vesicle	protein
AAA_19	PF13245.1	gi|297527312|ref|YP_003669336.1|	-	0.014	15.1	0.2	0.037	13.7	0.1	1.7	1	0	0	1	1	1	0	Part	of	AAA	domain
PPV_E1_C	PF00519.12	gi|297527312|ref|YP_003669336.1|	-	0.031	12.8	0.0	0.044	12.3	0.0	1.1	1	0	0	1	1	1	0	Papillomavirus	helicase
DnaB_C	PF03796.10	gi|297527312|ref|YP_003669336.1|	-	0.045	12.6	0.0	0.069	12.0	0.0	1.3	1	0	0	1	1	1	0	DnaB-like	helicase	C	terminal	domain
DUF2075	PF09848.4	gi|297527312|ref|YP_003669336.1|	-	0.087	11.7	0.2	0.16	10.8	0.1	1.5	1	1	1	2	2	2	0	Uncharacterized	conserved	protein	(DUF2075)
Topoisom_bac	PF01131.15	gi|297527313|ref|YP_003669337.1|	-	3.5e-88	296.1	0.3	7.8e-88	294.9	0.2	1.6	1	0	0	1	1	1	1	DNA	topoisomerase
Toprim	PF01751.17	gi|297527313|ref|YP_003669337.1|	-	7e-22	77.2	0.0	3.9e-21	74.9	0.0	2.4	1	0	0	1	1	1	1	Toprim	domain
DEAD	PF00270.24	gi|297527313|ref|YP_003669337.1|	-	1.4e-11	44.1	0.5	1.4e-10	40.9	0.2	2.8	2	1	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|297527313|ref|YP_003669337.1|	-	1.1e-09	37.9	0.2	0.0014	18.4	0.0	3.6	3	0	0	3	3	3	2	Helicase	conserved	C-terminal	domain
ResIII	PF04851.10	gi|297527313|ref|YP_003669337.1|	-	5.6e-06	26.3	1.1	5.6e-06	26.3	0.7	2.3	2	1	1	3	3	3	1	Type	III	restriction	enzyme,	res	subunit
AAA_22	PF13401.1	gi|297527313|ref|YP_003669337.1|	-	0.0047	17.0	2.0	0.21	11.7	0.2	4.1	2	1	0	3	3	3	1	AAA	domain
DUF35_N	PF12172.3	gi|297527313|ref|YP_003669337.1|	-	0.047	13.6	3.1	0.28	11.1	0.3	2.5	2	0	0	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
UPF0547	PF10571.4	gi|297527313|ref|YP_003669337.1|	-	0.056	13.1	0.1	0.056	13.1	0.0	3.1	3	0	0	3	3	3	0	Uncharacterised	protein	family	UPF0547
DUF87	PF01935.12	gi|297527313|ref|YP_003669337.1|	-	0.15	11.8	5.0	5.4	6.7	0.0	3.7	3	0	0	3	3	3	0	Domain	of	unknown	function	DUF87
DnaJ_CXXCXGXG	PF00684.14	gi|297527313|ref|YP_003669337.1|	-	0.19	11.8	4.3	1.4	8.9	0.3	2.4	2	0	0	2	2	2	0	DnaJ	central	domain
HypA	PF01155.14	gi|297527313|ref|YP_003669337.1|	-	0.36	10.5	3.9	0.21	11.3	0.3	2.3	2	0	0	2	2	2	0	Hydrogenase	expression/synthesis	hypA	family
DZR	PF12773.2	gi|297527313|ref|YP_003669337.1|	-	0.42	10.4	9.6	0.028	14.2	1.5	2.4	2	0	0	2	2	2	0	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|297527313|ref|YP_003669337.1|	-	0.78	9.0	9.4	0.29	10.4	2.6	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF1272	PF06906.6	gi|297527313|ref|YP_003669337.1|	-	0.92	9.4	4.2	12	5.8	0.8	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1272)
Zn-ribbon_8	PF09723.5	gi|297527313|ref|YP_003669337.1|	-	0.94	9.4	13.9	2.8	7.9	2.6	3.3	2	1	0	2	2	2	0	Zinc	ribbon	domain
zinc_ribbon_2	PF13240.1	gi|297527313|ref|YP_003669337.1|	-	0.99	8.9	12.5	0.18	11.3	4.4	2.5	2	0	0	2	2	2	0	zinc-ribbon	domain
Med4	PF10018.4	gi|297527313|ref|YP_003669337.1|	-	2	7.7	5.6	2.7	7.3	0.1	2.8	3	0	0	3	3	3	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
CN_hydrolase	PF00795.17	gi|297527314|ref|YP_003669338.1|	-	0.0024	17.2	0.0	0.082	12.2	0.0	2.3	1	1	1	2	2	2	2	Carbon-nitrogen	hydrolase
eIF-5a	PF01287.15	gi|297527316|ref|YP_003669340.1|	-	2.1e-14	53.2	0.8	3.1e-14	52.6	0.6	1.3	1	0	0	1	1	1	1	Eukaryotic	elongation	factor	5A	hypusine,	DNA-binding	OB	fold
EFP_N	PF08207.7	gi|297527316|ref|YP_003669340.1|	-	3.3e-07	30.0	0.2	2.6e-06	27.2	0.0	2.1	2	0	0	2	2	2	1	Elongation	factor	P	(EF-P)	KOW-like	domain
EFP	PF01132.15	gi|297527316|ref|YP_003669340.1|	-	0.022	14.4	0.2	0.038	13.6	0.1	1.5	1	0	0	1	1	1	0	Elongation	factor	P	(EF-P)	OB	domain
KOW	PF00467.24	gi|297527316|ref|YP_003669340.1|	-	0.028	14.1	0.1	0.067	12.9	0.0	1.7	1	0	0	1	1	1	0	KOW	motif
DUF2139	PF09910.4	gi|297527317|ref|YP_003669341.1|	-	5.4e-169	561.5	0.2	6.4e-169	561.3	0.1	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2139)
GDC-P	PF02347.11	gi|297527318|ref|YP_003669342.1|	-	1.2e-11	43.9	0.0	4e-10	38.9	0.0	2.1	2	0	0	2	2	2	1	Glycine	cleavage	system	P-protein
Aminotran_5	PF00266.14	gi|297527318|ref|YP_003669342.1|	-	4.7e-06	25.5	0.0	8.6e-06	24.7	0.0	1.3	1	0	0	1	1	1	1	Aminotransferase	class-V
Aminotran_1_2	PF00155.16	gi|297527318|ref|YP_003669342.1|	-	0.0031	16.5	0.0	0.0051	15.8	0.0	1.2	1	0	0	1	1	1	1	Aminotransferase	class	I	and	II
Beta_elim_lyase	PF01212.16	gi|297527318|ref|YP_003669342.1|	-	0.041	13.0	0.0	0.068	12.2	0.0	1.3	1	0	0	1	1	1	0	Beta-eliminating	lyase
GDC-P	PF02347.11	gi|297527319|ref|YP_003669343.1|	-	4.3e-127	424.3	0.0	4.9e-127	424.1	0.0	1.0	1	0	0	1	1	1	1	Glycine	cleavage	system	P-protein
Aminotran_5	PF00266.14	gi|297527319|ref|YP_003669343.1|	-	0.00035	19.4	0.0	0.00065	18.5	0.0	1.4	1	0	0	1	1	1	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.15	gi|297527319|ref|YP_003669343.1|	-	0.0064	14.8	0.0	0.011	13.9	0.0	1.4	1	0	0	1	1	1	1	Cys/Met	metabolism	PLP-dependent	enzyme
GCV_T	PF01571.16	gi|297527320|ref|YP_003669344.1|	-	6.8e-47	159.5	0.0	9.2e-47	159.1	0.0	1.1	1	0	0	1	1	1	1	Aminomethyltransferase	folate-binding	domain
GCV_T_C	PF08669.6	gi|297527320|ref|YP_003669344.1|	-	4.8e-21	74.5	0.0	7.7e-21	73.9	0.0	1.3	1	0	0	1	1	1	1	Glycine	cleavage	T-protein	C-terminal	barrel	domain
NAD_kinase	PF01513.16	gi|297527321|ref|YP_003669345.1|	-	2.7e-53	180.6	1.0	3e-53	180.4	0.7	1.0	1	0	0	1	1	1	1	ATP-NAD	kinase
DAGK_cat	PF00781.19	gi|297527321|ref|YP_003669345.1|	-	0.00048	19.5	0.3	0.0033	16.8	0.0	2.4	3	0	0	3	3	3	1	Diacylglycerol	kinase	catalytic	domain
SHMT	PF00464.14	gi|297527322|ref|YP_003669346.1|	-	2.7e-71	240.0	0.2	3.5e-71	239.6	0.1	1.1	1	0	0	1	1	1	1	Serine	hydroxymethyltransferase
Beta_elim_lyase	PF01212.16	gi|297527322|ref|YP_003669346.1|	-	2.8e-10	39.8	0.0	3.5e-10	39.5	0.0	1.1	1	0	0	1	1	1	1	Beta-eliminating	lyase
Aminotran_1_2	PF00155.16	gi|297527322|ref|YP_003669346.1|	-	5.7e-09	35.3	0.0	1.4e-08	34.0	0.0	1.5	1	1	0	1	1	1	1	Aminotransferase	class	I	and	II
Aminotran_5	PF00266.14	gi|297527322|ref|YP_003669346.1|	-	1.3e-05	24.1	0.2	2e-05	23.5	0.1	1.3	1	0	0	1	1	1	1	Aminotransferase	class-V
Cys_Met_Meta_PP	PF01053.15	gi|297527322|ref|YP_003669346.1|	-	0.018	13.3	0.2	0.04	12.1	0.1	1.7	1	1	0	1	1	1	0	Cys/Met	metabolism	PLP-dependent	enzyme
DegT_DnrJ_EryC1	PF01041.12	gi|297527322|ref|YP_003669346.1|	-	0.019	13.9	0.5	0.043	12.8	0.4	1.7	1	1	0	1	1	1	0	DegT/DnrJ/EryC1/StrS	aminotransferase	family
SelA	PF03841.8	gi|297527322|ref|YP_003669346.1|	-	0.047	12.4	0.0	0.061	12.0	0.0	1.3	1	0	0	1	1	1	0	L-seryl-tRNA	selenium	transferase
GCV_H	PF01597.14	gi|297527323|ref|YP_003669347.1|	-	5.1e-45	152.0	2.0	6.3e-45	151.7	1.4	1.1	1	0	0	1	1	1	1	Glycine	cleavage	H-protein
Biotin_lipoyl	PF00364.17	gi|297527323|ref|YP_003669347.1|	-	0.0024	17.4	1.7	0.0025	17.4	0.2	1.7	2	0	0	2	2	2	1	Biotin-requiring	enzyme
RnfC_N	PF13375.1	gi|297527323|ref|YP_003669347.1|	-	0.0028	17.3	0.0	0.0041	16.7	0.0	1.4	1	1	0	1	1	1	1	RnfC	Barrel	sandwich	hybrid	domain
Acetone_carb_G	PF08882.6	gi|297527323|ref|YP_003669347.1|	-	0.097	12.7	0.4	1.1	9.3	0.3	2.2	1	1	0	1	1	1	0	Acetone	carboxylase	gamma	subunit
KH_1	PF00013.24	gi|297527325|ref|YP_003669349.1|	-	3e-14	52.4	8.4	1.5e-06	27.7	1.8	2.3	2	0	0	2	2	2	2	KH	domain
KH_3	PF13014.1	gi|297527325|ref|YP_003669349.1|	-	1.3e-07	31.0	6.0	0.00066	19.2	0.4	2.4	2	0	0	2	2	2	2	KH	domain
KH_2	PF07650.12	gi|297527325|ref|YP_003669349.1|	-	0.043	13.3	4.9	2	8.0	0.6	2.5	2	0	0	2	2	2	0	KH	domain
RIO1	PF01163.17	gi|297527326|ref|YP_003669350.1|	-	2.2e-59	199.9	0.1	3.2e-59	199.4	0.0	1.2	1	0	0	1	1	1	1	RIO1	family
Kdo	PF06293.9	gi|297527326|ref|YP_003669350.1|	-	8.6e-05	21.6	0.0	0.023	13.7	0.0	2.2	2	0	0	2	2	2	2	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
APH	PF01636.18	gi|297527326|ref|YP_003669350.1|	-	0.00016	21.5	0.0	0.00063	19.5	0.0	1.8	1	1	1	2	2	2	1	Phosphotransferase	enzyme	family
Pkinase	PF00069.20	gi|297527326|ref|YP_003669350.1|	-	0.0022	17.1	0.2	0.0046	16.1	0.1	1.6	1	1	0	1	1	1	1	Protein	kinase	domain
eIF-1a	PF01176.14	gi|297527327|ref|YP_003669351.1|	-	1.8e-21	75.3	1.2	2.5e-21	74.8	0.8	1.2	1	0	0	1	1	1	1	Translation	initiation	factor	1A	/	IF-1
NMD3	PF04981.8	gi|297527328|ref|YP_003669352.1|	-	2e-41	141.6	0.0	2.6e-41	141.2	0.0	1.1	1	0	0	1	1	1	1	NMD3	family
Herpes_U44	PF04533.8	gi|297527328|ref|YP_003669352.1|	-	0.014	14.6	0.0	0.024	13.9	0.0	1.2	1	0	0	1	1	1	0	Herpes	virus	U44	protein
DZR	PF12773.2	gi|297527328|ref|YP_003669352.1|	-	0.024	14.4	2.6	0.3	10.9	0.6	2.6	2	1	0	2	2	2	0	Double	zinc	ribbon
Nudix_N_2	PF14803.1	gi|297527328|ref|YP_003669352.1|	-	0.055	13.1	3.8	8.5	6.1	0.0	3.4	3	0	0	3	3	3	0	Nudix	N-terminal
KOW	PF00467.24	gi|297527328|ref|YP_003669352.1|	-	0.11	12.2	0.1	0.11	12.2	0.1	2.5	3	0	0	3	3	3	0	KOW	motif
zf-ribbon_3	PF13248.1	gi|297527328|ref|YP_003669352.1|	-	0.53	9.5	8.5	10	5.4	0.8	3.2	3	0	0	3	3	3	0	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|297527328|ref|YP_003669352.1|	-	0.86	9.1	9.5	6.8	6.3	3.7	3.1	2	1	0	2	2	2	0	zinc-ribbon	domain
DUF424	PF04242.8	gi|297527329|ref|YP_003669353.1|	-	3.8e-27	94.1	0.0	4.5e-27	93.9	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF424)
eIF-5_eIF-2B	PF01873.12	gi|297527330|ref|YP_003669354.1|	-	1.7e-32	111.6	0.0	2e-32	111.4	0.0	1.0	1	0	0	1	1	1	1	Domain	found	in	IF2B/IF5
PhnA_Zn_Ribbon	PF08274.7	gi|297527330|ref|YP_003669354.1|	-	0.0017	18.0	1.0	0.78	9.5	0.2	2.3	2	0	0	2	2	2	2	PhnA	Zinc-Ribbon
Zn_Tnp_IS1595	PF12760.2	gi|297527330|ref|YP_003669354.1|	-	0.0097	15.6	0.2	0.016	14.9	0.1	1.4	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
Zn-ribbon_8	PF09723.5	gi|297527330|ref|YP_003669354.1|	-	0.017	15.0	1.8	0.071	13.0	1.2	2.0	1	1	0	1	1	1	0	Zinc	ribbon	domain
zf-TFIIB	PF13453.1	gi|297527330|ref|YP_003669354.1|	-	0.045	12.9	0.2	0.074	12.2	0.2	1.4	1	0	0	1	1	1	0	Transcription	factor	zinc-finger
zf-ribbon_3	PF13248.1	gi|297527330|ref|YP_003669354.1|	-	0.06	12.5	1.5	7	6.0	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
Lar_restr_allev	PF14354.1	gi|297527330|ref|YP_003669354.1|	-	0.069	13.4	0.4	0.13	12.5	0.3	1.4	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
RRN7	PF11781.3	gi|297527330|ref|YP_003669354.1|	-	0.093	12.2	0.1	1.1	8.8	0.0	2.1	2	0	0	2	2	2	0	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
DUF678	PF05077.7	gi|297527330|ref|YP_003669354.1|	-	0.096	12.6	1.0	3.6	7.6	0.8	2.2	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF678)
CpXC	PF14353.1	gi|297527330|ref|YP_003669354.1|	-	0.11	12.5	1.5	0.58	10.1	0.0	2.2	1	1	1	2	2	2	0	CpXC	protein
OrfB_Zn_ribbon	PF07282.6	gi|297527330|ref|YP_003669354.1|	-	0.14	11.8	0.6	0.27	10.9	0.4	1.4	1	0	0	1	1	1	0	Putative	transposase	DNA-binding	domain
DZR	PF12773.2	gi|297527330|ref|YP_003669354.1|	-	0.16	11.7	1.0	0.36	10.6	0.7	1.5	1	1	0	1	1	1	0	Double	zinc	ribbon
DNA_RNApol_7kD	PF03604.8	gi|297527330|ref|YP_003669354.1|	-	0.27	10.7	3.2	3.1	7.3	0.2	2.3	1	1	2	3	3	3	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
DUF3797	PF12677.2	gi|297527330|ref|YP_003669354.1|	-	0.27	10.8	3.2	2.2	7.9	0.2	2.3	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF3797)
Cys_rich_KTR	PF14205.1	gi|297527330|ref|YP_003669354.1|	-	0.34	10.3	2.2	0.92	9.0	1.5	1.7	1	1	0	1	1	1	0	Cysteine-rich	KTR
Nudix_N_2	PF14803.1	gi|297527330|ref|YP_003669354.1|	-	0.48	10.1	2.0	11	5.7	0.0	2.3	2	0	0	2	2	2	0	Nudix	N-terminal
zinc_ribbon_5	PF13719.1	gi|297527330|ref|YP_003669354.1|	-	1.1	8.9	3.3	9.2	5.9	2.3	2.3	1	1	0	1	1	1	0	zinc-ribbon	domain
Radical_SAM	PF04055.16	gi|297527331|ref|YP_003669355.1|	-	1.3e-27	97.0	0.1	3.1e-27	95.7	0.1	1.7	1	0	0	1	1	1	1	Radical	SAM	superfamily
UPF0004	PF00919.15	gi|297527331|ref|YP_003669355.1|	-	3.7e-24	84.4	0.2	7.9e-24	83.3	0.1	1.5	1	0	0	1	1	1	1	Uncharacterized	protein	family	UPF0004
TRAM	PF01938.15	gi|297527331|ref|YP_003669355.1|	-	0.00031	20.4	0.0	0.00067	19.3	0.0	1.6	1	0	0	1	1	1	1	TRAM	domain
EOS1	PF12326.3	gi|297527332|ref|YP_003669356.1|	-	0.12	11.9	6.2	0.15	11.7	3.7	1.5	1	1	0	1	1	1	0	N-glycosylation	protein
TRP	PF06011.7	gi|297527332|ref|YP_003669356.1|	-	0.14	10.7	6.9	0.15	10.5	4.8	1.2	1	0	0	1	1	1	0	Transient	receptor	potential	(TRP)	ion	channel
DUF4271	PF14093.1	gi|297527332|ref|YP_003669356.1|	-	0.43	10.2	16.3	0.59	9.7	11.3	1.2	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4271)
MS_channel	PF00924.13	gi|297527332|ref|YP_003669356.1|	-	1.3	8.3	7.4	6.8	5.9	5.2	2.2	1	1	0	1	1	1	0	Mechanosensitive	ion	channel
TrkA_N	PF02254.13	gi|297527333|ref|YP_003669357.1|	-	4.8e-17	62.0	0.3	7e-17	61.4	0.2	1.3	1	0	0	1	1	1	1	TrkA-N	domain
NAD_binding_7	PF13241.1	gi|297527333|ref|YP_003669357.1|	-	1.7e-08	34.6	0.1	2.7e-08	33.9	0.1	1.3	1	0	0	1	1	1	1	Putative	NAD(P)-binding
TrkA_C	PF02080.16	gi|297527333|ref|YP_003669357.1|	-	2.7e-08	33.2	0.1	7.6e-08	31.8	0.0	1.8	1	0	0	1	1	1	1	TrkA-C	domain
NAD_binding_10	PF13460.1	gi|297527333|ref|YP_003669357.1|	-	3e-05	24.1	0.1	3.6e-05	23.8	0.0	1.2	1	0	0	1	1	1	1	NADH(P)-binding
F420_oxidored	PF03807.12	gi|297527333|ref|YP_003669357.1|	-	0.00055	20.3	0.0	0.0011	19.3	0.0	1.6	1	1	0	1	1	1	1	NADP	oxidoreductase	coenzyme	F420-dependent
Shikimate_DH	PF01488.15	gi|297527333|ref|YP_003669357.1|	-	0.0016	18.5	0.1	0.0025	17.8	0.0	1.4	1	0	0	1	1	1	1	Shikimate	/	quinate	5-dehydrogenase
Saccharop_dh	PF03435.13	gi|297527333|ref|YP_003669357.1|	-	0.017	14.1	0.2	0.022	13.7	0.1	1.1	1	0	0	1	1	1	0	Saccharopine	dehydrogenase
ACT_5	PF13710.1	gi|297527333|ref|YP_003669357.1|	-	0.1	12.4	0.3	0.61	9.9	0.0	2.3	3	0	0	3	3	3	0	ACT	domain
DNA_III_psi	PF03603.8	gi|297527333|ref|YP_003669357.1|	-	0.12	12.2	0.0	2	8.2	0.0	2.2	2	0	0	2	2	2	0	DNA	polymerase	III	psi	subunit
GFO_IDH_MocA	PF01408.17	gi|297527333|ref|YP_003669357.1|	-	0.13	12.8	0.0	0.19	12.2	0.0	1.3	1	0	0	1	1	1	0	Oxidoreductase	family,	NAD-binding	Rossmann	fold
TrkH	PF02386.11	gi|297527334|ref|YP_003669358.1|	-	7.6e-45	153.0	21.7	7.6e-45	153.0	15.1	2.4	2	1	0	2	2	2	2	Cation	transport	protein
DUF447	PF04289.7	gi|297527335|ref|YP_003669359.1|	-	2e-20	73.0	0.4	2.5e-20	72.7	0.3	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF447)
PPR_2	PF13041.1	gi|297527335|ref|YP_003669359.1|	-	0.0049	16.8	0.3	1.7	8.6	0.2	2.6	2	0	0	2	2	2	2	PPR	repeat	family
MAF_flag10	PF01973.13	gi|297527336|ref|YP_003669360.1|	-	1.5e-32	112.4	0.1	2.9e-32	111.5	0.1	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF115
TPK_catalytic	PF04263.11	gi|297527336|ref|YP_003669360.1|	-	0.059	12.9	0.1	2.3	7.8	0.0	2.5	1	1	0	2	2	2	0	Thiamin	pyrophosphokinase,	catalytic	domain
Flavoprotein	PF02441.14	gi|297527337|ref|YP_003669361.1|	-	2e-18	66.2	0.0	3.3e-18	65.5	0.0	1.3	1	0	0	1	1	1	1	Flavoprotein
Fer4	PF00037.22	gi|297527337|ref|YP_003669361.1|	-	5.9e-11	41.4	14.1	3.1e-07	29.7	1.8	3.3	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|297527337|ref|YP_003669361.1|	-	9.5e-08	31.5	14.2	0.00018	21.2	1.6	2.5	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|297527337|ref|YP_003669361.1|	-	5.5e-06	26.1	16.5	8.8e-06	25.4	11.5	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|297527337|ref|YP_003669361.1|	-	1.3e-05	24.9	26.0	0.00011	21.9	9.3	2.1	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|297527337|ref|YP_003669361.1|	-	1.7e-05	24.4	13.4	0.00063	19.5	1.6	2.6	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|297527337|ref|YP_003669361.1|	-	2.1e-05	24.7	11.1	3.9e-05	23.8	7.7	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|297527337|ref|YP_003669361.1|	-	0.00012	22.4	14.2	0.0003	21.1	9.1	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|297527337|ref|YP_003669361.1|	-	0.00024	21.7	9.4	0.00073	20.2	0.8	2.3	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Fer4_15	PF13459.1	gi|297527337|ref|YP_003669361.1|	-	0.0061	17.0	7.0	0.064	13.8	0.2	2.8	2	1	0	2	2	2	1	4Fe-4S	single	cluster	domain
Fer4_8	PF13183.1	gi|297527337|ref|YP_003669361.1|	-	0.12	12.3	14.6	0.27	11.2	3.3	2.1	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|297527337|ref|YP_003669361.1|	-	0.4	11.0	10.9	0.12	12.7	0.8	2.3	2	0	0	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|297527337|ref|YP_003669361.1|	-	0.62	10.5	16.2	0.2	12.0	3.3	2.9	2	1	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_13	PF13370.1	gi|297527337|ref|YP_003669361.1|	-	8.5	6.8	12.3	12	6.3	2.2	2.8	3	1	0	3	3	2	0	4Fe-4S	single	cluster	domain
stn_TNFRSF12A	PF12191.3	gi|297527337|ref|YP_003669361.1|	-	9.5	6.2	10.1	2.5	8.1	1.5	2.4	1	1	1	2	2	2	0	Tumour	necrosis	factor	receptor	stn_TNFRSF12A_TNFR	domain
DUF1464	PF07318.7	gi|297527338|ref|YP_003669362.1|	-	2.5e-109	365.2	2.5	2.9e-109	365.0	1.7	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1464)
GCHY-1	PF02649.9	gi|297527339|ref|YP_003669363.1|	-	3.2e-52	177.4	0.0	3.8e-52	177.2	0.0	1.0	1	0	0	1	1	1	1	Type	I	GTP	cyclohydrolase	folE2
FolB	PF02152.13	gi|297527339|ref|YP_003669363.1|	-	0.034	14.3	0.1	0.088	12.9	0.0	1.7	1	0	0	1	1	1	0	Dihydroneopterin	aldolase
RmlD_sub_bind	PF04321.12	gi|297527339|ref|YP_003669363.1|	-	0.047	12.5	0.0	0.086	11.7	0.0	1.4	1	0	0	1	1	1	0	RmlD	substrate	binding	domain
PTPS	PF01242.14	gi|297527340|ref|YP_003669364.1|	-	9.9e-29	99.5	0.1	1.1e-28	99.3	0.0	1.0	1	0	0	1	1	1	1	6-pyruvoyl	tetrahydropterin	synthase
2-Hacid_dh	PF00389.25	gi|297527340|ref|YP_003669364.1|	-	0.0097	15.3	1.0	2.3	7.6	0.0	2.1	1	1	0	2	2	2	2	D-isomer	specific	2-hydroxyacid	dehydrogenase,	catalytic	domain
AMP-binding_C_2	PF14535.1	gi|297527340|ref|YP_003669364.1|	-	0.056	13.4	0.1	0.18	11.8	0.1	1.8	2	0	0	2	2	2	0	AMP-binding	enzyme	C-terminal	domain
GHMP_kinases_C	PF08544.8	gi|297527341|ref|YP_003669365.1|	-	2.8e-06	27.4	0.0	6.6e-06	26.2	0.0	1.6	1	0	0	1	1	1	1	GHMP	kinases	C	terminal
GHMP_kinases_N	PF00288.21	gi|297527341|ref|YP_003669365.1|	-	0.00055	19.9	0.0	0.00095	19.1	0.0	1.4	1	0	0	1	1	1	1	GHMP	kinases	N	terminal	domain
Pterin_bind	PF00809.17	gi|297527342|ref|YP_003669366.1|	-	5.8e-11	42.1	0.2	2e-10	40.3	0.0	2.0	2	0	0	2	2	2	1	Pterin	binding	enzyme
DUF4346	PF14251.1	gi|297527342|ref|YP_003669366.1|	-	3.7e-09	36.3	0.1	2e-07	30.7	0.0	2.4	1	1	1	2	2	2	2	Domain	of	unknown	function	(DUF4346)
tRNA-synt_2c	PF01411.14	gi|297527343|ref|YP_003669367.1|	-	7.2e-95	318.3	0.4	3e-93	313.0	0.3	2.2	1	1	0	1	1	1	1	tRNA	synthetases	class	II	(A)
tRNA_SAD	PF07973.9	gi|297527343|ref|YP_003669367.1|	-	1.4e-12	47.2	0.1	3.1e-12	46.1	0.1	1.6	1	0	0	1	1	1	1	Threonyl	and	Alanyl	tRNA	synthetase	second	additional	domain
DHHA1	PF02272.14	gi|297527343|ref|YP_003669367.1|	-	0.049	13.3	0.0	0.15	11.7	0.0	1.8	1	0	0	1	1	1	0	DHHA1	domain
Ribosomal_60s	PF00428.14	gi|297527344|ref|YP_003669368.1|	-	7e-19	68.0	19.4	9.3e-19	67.6	13.5	1.2	1	0	0	1	1	1	1	60s	Acidic	ribosomal	protein
PepSY_2	PF13670.1	gi|297527344|ref|YP_003669368.1|	-	0.00033	20.4	4.2	0.12	12.2	0.1	2.2	2	0	0	2	2	2	2	Peptidase	propeptide	and	YPEB	domain
DUF177	PF02620.12	gi|297527344|ref|YP_003669368.1|	-	0.02	14.9	3.5	0.023	14.7	2.4	1.1	1	0	0	1	1	1	0	Uncharacterized	ACR,	COG1399
Ribonuc_L-PSP	PF01042.16	gi|297527344|ref|YP_003669368.1|	-	0.033	13.9	0.3	0.045	13.5	0.2	1.2	1	0	0	1	1	1	0	Endoribonuclease	L-PSP
MIP-T3	PF10243.4	gi|297527344|ref|YP_003669368.1|	-	0.036	12.5	5.9	0.05	12.0	4.1	1.1	1	0	0	1	1	1	0	Microtubule-binding	protein	MIP-T3
DUF2722	PF10846.3	gi|297527344|ref|YP_003669368.1|	-	0.095	11.7	0.6	0.11	11.5	0.4	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2722)
PBP_sp32	PF07222.7	gi|297527344|ref|YP_003669368.1|	-	0.25	10.5	5.1	0.25	10.4	3.6	1.2	1	0	0	1	1	1	0	Proacrosin	binding	protein	sp32
BSP_II	PF05432.6	gi|297527344|ref|YP_003669368.1|	-	0.42	9.8	7.8	0.41	9.8	5.4	1.2	1	0	0	1	1	1	0	Bone	sialoprotein	II	(BSP-II)
Myc_N	PF01056.13	gi|297527344|ref|YP_003669368.1|	-	0.71	8.9	4.2	0.84	8.7	2.9	1.1	1	0	0	1	1	1	0	Myc	amino-terminal	region
DUF2226	PF09987.4	gi|297527344|ref|YP_003669368.1|	-	0.98	8.4	9.7	1.3	8.0	6.7	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2226)
Sigma70_ner	PF04546.8	gi|297527344|ref|YP_003669368.1|	-	1.3	8.5	10.2	1.5	8.3	6.9	1.3	1	1	0	1	1	1	0	Sigma-70,	non-essential	region
Adeno_terminal	PF02459.10	gi|297527344|ref|YP_003669368.1|	-	1.6	6.7	4.7	2.2	6.3	3.2	1.3	1	0	0	1	1	1	0	Adenoviral	DNA	terminal	protein
DUF3682	PF12446.3	gi|297527344|ref|YP_003669368.1|	-	4.5	7.5	12.0	6.8	6.9	8.3	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3682)
DUF1682	PF07946.9	gi|297527344|ref|YP_003669368.1|	-	5	5.8	13.4	10	4.8	7.7	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1682)
SHS2_FTSA	PF02491.15	gi|297527344|ref|YP_003669368.1|	-	7.3	6.5	6.6	3.5	7.5	0.1	2.7	2	1	1	3	3	3	0	SHS2	domain	inserted	in	FTSA
Ribosomal_L10	PF00466.15	gi|297527345|ref|YP_003669369.1|	-	9.2e-25	86.4	0.4	2.3e-24	85.1	0.3	1.7	1	0	0	1	1	1	1	Ribosomal	protein	L10
RBD	PF02196.10	gi|297527345|ref|YP_003669369.1|	-	0.05	13.3	0.0	0.14	11.9	0.0	1.7	1	0	0	1	1	1	0	Raf-like	Ras-binding	domain
U1snRNP70_N	PF12220.3	gi|297527345|ref|YP_003669369.1|	-	0.19	12.0	3.9	0.75	10.1	1.5	2.2	2	0	0	2	2	2	0	U1	small	nuclear	ribonucleoprotein	of	70kDa	MW	N	terminal
Ribosomal_60s	PF00428.14	gi|297527345|ref|YP_003669369.1|	-	1.3	9.4	13.7	3.3	8.1	9.5	1.8	1	1	0	1	1	1	0	60s	Acidic	ribosomal	protein
Ribosomal_L1	PF00687.16	gi|297527346|ref|YP_003669370.1|	-	3.9e-43	147.3	0.0	4.5e-43	147.1	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L1p/L10e	family
Ribosomal_L11_N	PF03946.9	gi|297527347|ref|YP_003669371.1|	-	2.4e-24	84.5	0.5	4.5e-24	83.6	0.4	1.5	1	0	0	1	1	1	1	Ribosomal	protein	L11,	N-terminal	domain
Ribosomal_L11	PF00298.14	gi|297527347|ref|YP_003669371.1|	-	7.7e-21	74.0	2.3	1.5e-20	73.1	1.6	1.5	1	0	0	1	1	1	1	Ribosomal	protein	L11,	RNA	binding	domain
Cpl-7	PF08230.6	gi|297527347|ref|YP_003669371.1|	-	0.061	13.0	0.0	0.13	11.9	0.0	1.6	1	0	0	1	1	1	0	Cpl-7	lysozyme	C-terminal	domain
Spt5-NGN	PF03439.8	gi|297527348|ref|YP_003669372.1|	-	1.9e-20	72.3	0.0	3.6e-20	71.4	0.0	1.5	1	0	0	1	1	1	1	Early	transcription	elongation	factor	of	RNA	pol	II,	NGN	section
KOW	PF00467.24	gi|297527348|ref|YP_003669372.1|	-	7.9e-08	31.7	0.9	2.3e-07	30.2	0.1	2.1	2	0	0	2	2	2	1	KOW	motif
NusG	PF02357.14	gi|297527348|ref|YP_003669372.1|	-	0.0018	18.4	0.1	0.0038	17.4	0.0	1.6	1	1	0	1	1	1	1	Transcription	termination	factor	nusG
SecE	PF00584.15	gi|297527349|ref|YP_003669373.1|	-	0.0051	16.3	0.5	0.0058	16.1	0.4	1.1	1	0	0	1	1	1	1	SecE/Sec61-gamma	subunits	of	protein	translocation	complex
SRP54	PF00448.17	gi|297527350|ref|YP_003669374.1|	-	3.2e-72	242.1	0.1	5e-72	241.4	0.0	1.3	1	0	0	1	1	1	1	SRP54-type	protein,	GTPase	domain
SRP54_N	PF02881.14	gi|297527350|ref|YP_003669374.1|	-	8.5e-08	32.1	4.4	8.5e-08	32.1	3.1	1.9	3	0	0	3	3	1	1	SRP54-type	protein,	helical	bundle	domain
cobW	PF02492.14	gi|297527350|ref|YP_003669374.1|	-	1.9e-06	27.4	0.0	3.2e-06	26.7	0.0	1.3	1	0	0	1	1	1	1	CobW/HypB/UreG,	nucleotide-binding	domain
CbiA	PF01656.18	gi|297527350|ref|YP_003669374.1|	-	2.9e-05	23.5	2.5	0.0002	20.8	1.7	2.2	1	1	0	1	1	1	1	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
NTPase_1	PF03266.10	gi|297527350|ref|YP_003669374.1|	-	7.3e-05	22.5	0.7	0.011	15.4	0.5	2.5	1	1	0	1	1	1	1	NTPase
ArsA_ATPase	PF02374.10	gi|297527350|ref|YP_003669374.1|	-	0.00026	20.1	0.8	0.038	13.0	0.1	2.7	3	0	0	3	3	3	1	Anion-transporting	ATPase
ArgK	PF03308.11	gi|297527350|ref|YP_003669374.1|	-	0.00028	19.7	2.4	0.00038	19.3	0.3	2.2	2	1	0	2	2	2	1	ArgK	protein
AAA_30	PF13604.1	gi|297527350|ref|YP_003669374.1|	-	0.00054	19.5	0.0	0.00096	18.7	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_31	PF13614.1	gi|297527350|ref|YP_003669374.1|	-	0.00073	19.5	0.1	1.8	8.4	0.0	2.8	3	0	0	3	3	3	2	AAA	domain
MobB	PF03205.9	gi|297527350|ref|YP_003669374.1|	-	0.0018	17.9	1.5	0.0034	17.0	0.1	2.2	3	0	0	3	3	3	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_22	PF13401.1	gi|297527350|ref|YP_003669374.1|	-	0.0026	17.9	0.9	0.031	14.4	0.2	2.7	2	1	0	2	2	2	1	AAA	domain
AAA_24	PF13479.1	gi|297527350|ref|YP_003669374.1|	-	0.0036	16.9	0.0	0.007	15.9	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|297527350|ref|YP_003669374.1|	-	0.007	16.2	0.0	0.014	15.2	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|297527350|ref|YP_003669374.1|	-	0.0085	16.2	1.4	0.017	15.2	0.1	2.1	2	2	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
Response_reg	PF00072.19	gi|297527350|ref|YP_003669374.1|	-	0.046	13.7	0.2	0.19	11.7	0.0	2.1	2	0	0	2	2	2	0	Response	regulator	receiver	domain
Zeta_toxin	PF06414.7	gi|297527350|ref|YP_003669374.1|	-	0.066	12.3	0.0	0.14	11.2	0.0	1.5	1	1	0	1	1	1	0	Zeta	toxin
AAA_19	PF13245.1	gi|297527350|ref|YP_003669374.1|	-	0.076	12.7	0.3	0.36	10.5	0.1	2.1	2	0	0	2	2	2	0	Part	of	AAA	domain
AAA_16	PF13191.1	gi|297527350|ref|YP_003669374.1|	-	0.078	12.9	0.1	0.4	10.6	0.1	2.0	1	1	0	1	1	1	0	AAA	ATPase	domain
MMR_HSR1	PF01926.18	gi|297527350|ref|YP_003669374.1|	-	0.3	11.0	1.6	0.57	10.1	0.2	2.1	2	1	0	2	2	2	0	50S	ribosome-binding	GTPase
AAA_23	PF13476.1	gi|297527350|ref|YP_003669374.1|	-	3.4	7.9	5.7	0.81	9.9	0.5	2.0	1	1	1	2	2	2	0	AAA	domain
Prefoldin	PF02996.12	gi|297527351|ref|YP_003669375.1|	-	1.2e-14	53.9	0.6	2.1e-14	53.1	0.4	1.4	1	0	0	1	1	1	1	Prefoldin	subunit
Prefoldin_2	PF01920.15	gi|297527351|ref|YP_003669375.1|	-	3e-07	30.1	5.3	0.00018	21.1	0.7	2.4	2	0	0	2	2	2	2	Prefoldin	subunit
LRR_8	PF13855.1	gi|297527351|ref|YP_003669375.1|	-	0.00033	20.3	0.6	0.0013	18.3	0.1	1.9	1	1	0	1	1	1	1	Leucine	rich	repeat
IncA	PF04156.9	gi|297527351|ref|YP_003669375.1|	-	0.0078	15.8	5.0	0.032	13.8	0.3	2.0	2	0	0	2	2	2	1	IncA	protein
Scaffolding_pro	PF11418.3	gi|297527351|ref|YP_003669375.1|	-	0.018	15.3	1.0	2.8	8.3	0.0	2.2	2	0	0	2	2	2	0	Phi29	scaffolding	protein
FliD_N	PF02465.13	gi|297527351|ref|YP_003669375.1|	-	0.024	14.9	0.2	0.024	14.9	0.1	2.2	1	1	1	2	2	2	0	Flagellar	hook-associated	protein	2	N-terminus
NPV_P10	PF05531.7	gi|297527351|ref|YP_003669375.1|	-	0.062	13.5	3.5	2	8.7	0.2	2.5	2	1	0	2	2	2	0	Nucleopolyhedrovirus	P10	protein
BLOC1_2	PF10046.4	gi|297527351|ref|YP_003669375.1|	-	0.12	12.5	6.2	0.56	10.3	0.2	2.2	2	0	0	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
DUF4047	PF13256.1	gi|297527351|ref|YP_003669375.1|	-	0.18	11.7	3.8	0.23	11.4	0.3	2.0	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4047)
FlaC_arch	PF05377.6	gi|297527351|ref|YP_003669375.1|	-	0.28	11.0	2.6	0.46	10.4	0.3	2.2	2	0	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
DUF972	PF06156.8	gi|297527351|ref|YP_003669375.1|	-	0.36	11.1	3.4	10	6.5	0.2	2.2	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF972)
YlbD_coat	PF14071.1	gi|297527351|ref|YP_003669375.1|	-	0.38	10.8	4.5	1.7	8.6	0.4	2.1	2	0	0	2	2	2	0	Putative	coat	protein
Fib_alpha	PF08702.5	gi|297527351|ref|YP_003669375.1|	-	0.55	10.3	10.3	0.52	10.4	1.4	2.1	2	0	0	2	2	2	0	Fibrinogen	alpha/beta	chain	family
Tnp_P_element	PF12017.3	gi|297527351|ref|YP_003669375.1|	-	0.57	9.3	5.4	3.9	6.6	0.4	2.1	2	0	0	2	2	2	0	Transposase	protein
Seryl_tRNA_N	PF02403.17	gi|297527351|ref|YP_003669375.1|	-	0.67	9.9	4.8	0.58	10.2	0.5	2.2	2	0	0	2	2	2	0	Seryl-tRNA	synthetase	N-terminal	domain
Tup_N	PF08581.5	gi|297527351|ref|YP_003669375.1|	-	0.82	9.9	5.3	1.3	9.2	0.2	2.4	2	0	0	2	2	2	0	Tup	N-terminal
Syntaxin_2	PF14523.1	gi|297527351|ref|YP_003669375.1|	-	1.3	9.1	7.6	8.3	6.4	1.5	2.7	2	1	0	2	2	2	0	Syntaxin-like	protein
DUF948	PF06103.6	gi|297527351|ref|YP_003669375.1|	-	1.6	8.6	6.0	6.5	6.6	1.2	2.2	2	0	0	2	2	2	0	Bacterial	protein	of	unknown	function	(DUF948)
COG5	PF10392.4	gi|297527351|ref|YP_003669375.1|	-	2.1	8.3	7.5	1.2	9.0	0.5	2.1	2	0	0	2	2	2	0	Golgi	transport	complex	subunit	5
TPR_MLP1_2	PF07926.7	gi|297527351|ref|YP_003669375.1|	-	9.8	5.9	11.6	4.4	7.0	1.6	2.2	2	0	0	2	2	2	0	TPR/MLP1/MLP2-like	protein
Ribosomal_L18ae	PF01775.12	gi|297527352|ref|YP_003669376.1|	-	2.8e-13	49.8	0.5	3.7e-13	49.4	0.3	1.2	1	0	0	1	1	1	1	Ribosomal	L18ae/LX	protein	domain
SopD	PF11047.3	gi|297527352|ref|YP_003669376.1|	-	0.064	12.2	0.1	0.064	12.2	0.1	1.0	1	0	0	1	1	1	0	Salmonella	outer	protein	D
DUF4102	PF13356.1	gi|297527352|ref|YP_003669376.1|	-	0.066	13.1	0.1	0.098	12.5	0.1	1.3	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4102)
eIF-6	PF01912.13	gi|297527353|ref|YP_003669377.1|	-	3.3e-66	222.1	5.1	3.8e-66	221.9	3.6	1.0	1	0	0	1	1	1	1	eIF-6	family
NosD	PF05048.8	gi|297527353|ref|YP_003669377.1|	-	0.021	13.9	1.8	0.032	13.3	1.2	1.3	1	0	0	1	1	1	0	Periplasmic	copper-binding	protein	(NosD)
Ribosomal_L31e	PF01198.14	gi|297527354|ref|YP_003669378.1|	-	2e-20	72.2	4.0	2.4e-20	71.9	2.8	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L31e
NDUF_B4	PF07225.7	gi|297527354|ref|YP_003669378.1|	-	0.081	12.7	0.4	0.11	12.3	0.3	1.3	1	0	0	1	1	1	0	NADH-ubiquinone	oxidoreductase	B15	subunit	(NDUFB4)
Ribosomal_L39	PF00832.15	gi|297527355|ref|YP_003669379.1|	-	1.4e-18	66.0	8.4	1.7e-18	65.7	5.8	1.1	1	0	0	1	1	1	1	Ribosomal	L39	protein
dsDNA_bind	PF01984.15	gi|297527356|ref|YP_003669380.1|	-	3e-27	94.6	7.5	3.9e-27	94.3	5.2	1.1	1	0	0	1	1	1	1	Double-stranded	DNA-binding	domain
Radial_spoke_3	PF06098.6	gi|297527356|ref|YP_003669380.1|	-	6e-05	22.1	3.8	7.3e-05	21.9	2.6	1.0	1	0	0	1	1	1	1	Radial	spoke	protein	3
Elongin_A	PF06881.6	gi|297527356|ref|YP_003669380.1|	-	0.38	11.1	3.2	0.94	9.8	0.1	2.1	2	0	0	2	2	2	0	RNA	polymerase	II	transcription	factor	SIII	(Elongin)	subunit	A
Ribosomal_S19e	PF01090.14	gi|297527357|ref|YP_003669381.1|	-	4.9e-56	188.0	0.0	5.7e-56	187.8	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S19e
HTH_12	PF08461.5	gi|297527357|ref|YP_003669381.1|	-	0.0006	19.4	0.2	0.014	15.1	0.1	2.2	2	0	0	2	2	2	1	Ribonuclease	R	winged-helix	domain
HTH_45	PF14947.1	gi|297527357|ref|YP_003669381.1|	-	0.1	12.4	0.0	0.19	11.5	0.0	1.5	1	0	0	1	1	1	0	Winged	helix-turn-helix
CRS1_YhbY	PF01985.16	gi|297527358|ref|YP_003669382.1|	-	3.8e-15	55.6	0.3	6.9e-15	54.8	0.2	1.4	1	1	0	1	1	1	1	CRS1	/	YhbY	(CRM)	domain
DUF2513	PF10711.4	gi|297527358|ref|YP_003669382.1|	-	0.015	15.3	0.5	0.99	9.5	0.0	2.1	2	0	0	2	2	2	0	Hypothetical	protein	(DUF2513)
Rpr2	PF04032.11	gi|297527359|ref|YP_003669383.1|	-	1.3e-20	73.0	0.0	1.8e-20	72.5	0.0	1.2	1	0	0	1	1	1	1	RNAse	P	Rpr2/Rpp21/SNM1	subunit	domain
Fis1_TPR_C	PF14853.1	gi|297527359|ref|YP_003669383.1|	-	0.0022	17.8	1.8	0.0038	17.0	1.2	1.4	1	0	0	1	1	1	1	Fis1	C-terminal	tetratricopeptide	repeat
MBD	PF01429.14	gi|297527359|ref|YP_003669383.1|	-	0.026	14.0	0.1	0.055	13.0	0.1	1.5	1	0	0	1	1	1	0	Methyl-CpG	binding	domain
TPR_2	PF07719.12	gi|297527359|ref|YP_003669383.1|	-	0.1	12.5	0.8	0.21	11.5	0.5	1.6	1	0	0	1	1	1	0	Tetratricopeptide	repeat
EMG1	PF03587.9	gi|297527360|ref|YP_003669384.1|	-	9.8e-60	201.3	0.0	1.1e-59	201.1	0.0	1.0	1	0	0	1	1	1	1	EMG1/NEP1	methyltransferase
RecA	PF00154.16	gi|297527360|ref|YP_003669384.1|	-	0.068	12.2	0.0	0.11	11.5	0.0	1.3	1	0	0	1	1	1	0	recA	bacterial	DNA	recombination	protein
HARE-HTH	PF05066.8	gi|297527360|ref|YP_003669384.1|	-	0.15	12.4	0.5	31	5.0	0.0	3.1	2	1	1	3	3	3	0	HB1,	ASXL,	restriction	endonuclease	HTH	domain
NRDD	PF13597.1	gi|297527361|ref|YP_003669385.1|	-	2.9e-192	639.5	0.0	3.3e-192	639.4	0.0	1.0	1	0	0	1	1	1	1	Anaerobic	ribonucleoside-triphosphate	reductase
HypA	PF01155.14	gi|297527361|ref|YP_003669385.1|	-	0.034	13.8	0.1	0.066	12.8	0.1	1.4	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
FYVE	PF01363.16	gi|297527361|ref|YP_003669385.1|	-	0.094	12.6	0.4	0.17	11.7	0.3	1.4	1	0	0	1	1	1	0	FYVE	zinc	finger
DUF35_N	PF12172.3	gi|297527361|ref|YP_003669385.1|	-	0.28	11.1	1.9	0.57	10.1	1.3	1.5	1	0	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
Radical_SAM	PF04055.16	gi|297527362|ref|YP_003669386.1|	-	7.6e-16	58.7	0.1	1.3e-15	57.9	0.0	1.4	1	1	0	1	1	1	1	Radical	SAM	superfamily
Fer4_14	PF13394.1	gi|297527362|ref|YP_003669386.1|	-	5e-12	45.8	0.1	1.2e-11	44.6	0.1	1.6	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Fer4_12	PF13353.1	gi|297527362|ref|YP_003669386.1|	-	1.5e-09	38.0	0.1	2.6e-09	37.3	0.1	1.3	1	0	0	1	1	1	1	4Fe-4S	single	cluster	domain
Thy1	PF02511.10	gi|297527363|ref|YP_003669387.1|	-	1.3e-61	207.2	0.4	1.8e-61	206.8	0.3	1.1	1	0	0	1	1	1	1	Thymidylate	synthase	complementing	protein
dUTPase	PF00692.14	gi|297527364|ref|YP_003669388.1|	-	2.5e-11	43.1	0.0	4.4e-11	42.3	0.0	1.4	1	0	0	1	1	1	1	dUTPase
MFS_1	PF07690.11	gi|297527365|ref|YP_003669389.1|	-	1.3e-39	135.9	38.3	1.5e-25	89.6	14.2	2.0	2	0	0	2	2	2	2	Major	Facilitator	Superfamily
Sugar_tr	PF00083.19	gi|297527365|ref|YP_003669389.1|	-	5.3e-31	107.6	20.8	1.5e-30	106.2	14.4	1.8	1	1	0	1	1	1	1	Sugar	(and	other)	transporter
BT1	PF03092.11	gi|297527365|ref|YP_003669389.1|	-	0.23	10.1	9.6	0.73	8.4	6.7	2.2	1	1	0	1	1	1	0	BT1	family
SfsA	PF03749.8	gi|297527366|ref|YP_003669390.1|	-	4.4e-45	153.7	0.0	5.3e-45	153.5	0.0	1.0	1	0	0	1	1	1	1	Sugar	fermentation	stimulation	protein
FA_desaturase_2	PF03405.9	gi|297527367|ref|YP_003669391.1|	-	0.00025	19.9	0.6	0.097	11.4	0.0	2.1	1	1	1	2	2	2	2	Fatty	acid	desaturase
Rubrerythrin	PF02915.12	gi|297527367|ref|YP_003669391.1|	-	0.00026	21.3	11.0	0.00033	20.9	5.4	2.3	1	1	1	2	2	2	1	Rubrerythrin
FCH	PF00611.18	gi|297527367|ref|YP_003669391.1|	-	0.0011	19.0	3.9	0.0027	17.8	2.7	1.9	1	1	0	1	1	1	1	Fes/CIP4,	and	EFC/F-BAR	homology	domain
RhoGEF	PF00621.15	gi|297527367|ref|YP_003669391.1|	-	0.012	15.5	4.4	0.019	14.8	2.2	1.8	1	1	1	2	2	2	0	RhoGEF	domain
DUF892	PF05974.7	gi|297527367|ref|YP_003669391.1|	-	0.056	13.2	4.5	0.24	11.2	0.6	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF892)
HBS1_N	PF08938.5	gi|297527367|ref|YP_003669391.1|	-	0.18	11.9	1.1	0.38	10.9	0.1	2.0	2	1	0	2	2	2	0	HBS1	N-terminus
Rho_N	PF07498.7	gi|297527367|ref|YP_003669391.1|	-	0.48	10.2	5.2	2.8	7.7	0.6	2.6	2	0	0	2	2	2	0	Rho	termination	factor,	N-terminal	domain
MSC	PF09402.5	gi|297527367|ref|YP_003669391.1|	-	0.56	8.8	2.9	0.65	8.6	2.0	1.2	1	0	0	1	1	1	0	Man1-Src1p-C-terminal	domain
Rubrerythrin	PF02915.12	gi|297527368|ref|YP_003669392.1|	-	3.8e-11	43.4	0.3	4.3e-11	43.2	0.2	1.1	1	0	0	1	1	1	1	Rubrerythrin
DUF2383	PF09537.5	gi|297527368|ref|YP_003669392.1|	-	5.7e-05	23.3	0.3	7.2e-05	22.9	0.2	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF2383)
Ferritin	PF00210.19	gi|297527368|ref|YP_003669392.1|	-	0.0029	17.3	0.2	0.0036	17.0	0.1	1.2	1	0	0	1	1	1	1	Ferritin-like	domain
DUF2202	PF09968.4	gi|297527368|ref|YP_003669392.1|	-	0.03	14.0	0.1	0.034	13.8	0.0	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	domain	(DUF2202)
Ferritin_2	PF13668.1	gi|297527368|ref|YP_003669392.1|	-	0.05	13.5	0.1	0.059	13.3	0.1	1.1	1	0	0	1	1	1	0	Ferritin-like	domain
TPPII_N	PF12583.3	gi|297527368|ref|YP_003669392.1|	-	0.11	12.6	0.3	0.16	12.0	0.2	1.2	1	0	0	1	1	1	0	Tripeptidyl	peptidase	II	N	terminal
DUF2400	PF09674.5	gi|297527368|ref|YP_003669392.1|	-	0.13	11.9	0.1	0.13	11.8	0.0	1.0	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2400)
DUF454	PF04304.8	gi|297527369|ref|YP_003669393.1|	-	1.6	8.7	9.6	4.7	7.3	3.7	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF454)
SID-1_RNA_chan	PF13965.1	gi|297527369|ref|YP_003669393.1|	-	1.8	6.6	11.7	2	6.5	8.1	1.0	1	0	0	1	1	1	0	dsRNA-gated	channel	SID-1
DUF2393	PF09624.5	gi|297527369|ref|YP_003669393.1|	-	4.7	6.7	9.1	7.1	6.1	6.3	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2393)
SK_channel	PF03530.9	gi|297527369|ref|YP_003669393.1|	-	6.3	6.6	11.4	11	5.9	7.9	1.4	1	1	0	1	1	1	0	Calcium-activated	SK	potassium	channel
ADH_N	PF08240.7	gi|297527370|ref|YP_003669394.1|	-	2.8e-34	117.1	0.8	5.2e-34	116.2	0.6	1.4	1	0	0	1	1	1	1	Alcohol	dehydrogenase	GroES-like	domain
ADH_zinc_N	PF00107.21	gi|297527370|ref|YP_003669394.1|	-	4.8e-09	35.8	0.0	1.1e-08	34.7	0.0	1.6	1	1	0	1	1	1	1	Zinc-binding	dehydrogenase
ADH_zinc_N_2	PF13602.1	gi|297527370|ref|YP_003669394.1|	-	4e-05	24.5	0.0	6.9e-05	23.7	0.0	1.4	1	0	0	1	1	1	1	Zinc-binding	dehydrogenase
Fer4_11	PF13247.1	gi|297527371|ref|YP_003669395.1|	-	3.7e-23	81.2	8.9	3.7e-23	81.2	6.1	2.0	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|297527371|ref|YP_003669395.1|	-	2.8e-15	56.2	44.3	5.7e-07	29.7	6.9	3.0	1	1	3	4	4	4	4	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|297527371|ref|YP_003669395.1|	-	5.2e-14	52.3	26.0	3.1e-08	33.8	7.3	3.5	2	1	2	4	4	4	4	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|297527371|ref|YP_003669395.1|	-	1.5e-12	47.0	48.1	6.3e-06	25.8	8.0	3.4	1	1	3	4	4	4	3	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|297527371|ref|YP_003669395.1|	-	7.9e-12	44.3	32.4	2.6e-06	27.0	0.5	4.7	4	1	0	4	4	4	3	4Fe-4S	binding	domain
Fer4	PF00037.22	gi|297527371|ref|YP_003669395.1|	-	9.2e-11	40.8	42.5	1.3e-05	24.5	2.1	5.2	6	0	0	6	6	6	4	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|297527371|ref|YP_003669395.1|	-	1.2e-09	37.6	40.7	0.00018	21.2	1.8	4.8	4	1	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|297527371|ref|YP_003669395.1|	-	1.4e-08	34.7	40.2	0.0014	19.0	2.8	4.2	4	0	0	4	4	4	4	4Fe-4S	binding	domain
Fer4_8	PF13183.1	gi|297527371|ref|YP_003669395.1|	-	1.9e-07	30.9	26.0	0.00016	21.6	5.3	3.7	1	1	2	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|297527371|ref|YP_003669395.1|	-	8.6e-07	28.8	36.1	0.002	18.3	1.6	4.5	4	1	0	4	4	4	3	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|297527371|ref|YP_003669395.1|	-	1.8e-06	28.1	24.2	0.15	12.4	0.1	4.4	3	2	0	3	3	3	3	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|297527371|ref|YP_003669395.1|	-	2.5e-06	27.7	21.9	0.0076	16.6	1.5	4.2	3	1	1	4	4	4	2	4Fe-4S	dicluster	domain
Fer4_16	PF13484.1	gi|297527371|ref|YP_003669395.1|	-	9e-06	26.3	24.7	0.13	13.0	0.8	4.5	3	1	0	4	4	4	3	4Fe-4S	double	cluster	binding	domain
Fer4_21	PF14697.1	gi|297527371|ref|YP_003669395.1|	-	0.0005	19.8	29.8	0.0039	17.0	6.9	3.7	3	1	2	5	5	5	3	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|297527371|ref|YP_003669395.1|	-	0.00098	19.6	22.6	0.025	15.1	0.3	3.7	3	1	0	3	3	3	2	4Fe-4S	single	cluster	domain
GF_recep_IV	PF14843.1	gi|297527371|ref|YP_003669395.1|	-	0.26	10.9	16.2	0.86	9.2	6.5	2.3	1	1	1	2	2	2	0	Growth	factor	receptor	domain	IV
Pyr_redox_2	PF07992.9	gi|297527372|ref|YP_003669396.1|	-	3.1e-24	85.9	0.0	8.8e-24	84.5	0.0	2.5	1	1	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|297527372|ref|YP_003669396.1|	-	3e-13	50.2	0.2	3.7e-06	27.1	0.0	2.7	2	1	1	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
NAD_binding_8	PF13450.1	gi|297527372|ref|YP_003669396.1|	-	8.4e-09	35.3	1.9	6.7e-07	29.2	0.1	2.5	2	0	0	2	2	2	1	NAD(P)-binding	Rossmann-like	domain
Pyr_redox	PF00070.22	gi|297527372|ref|YP_003669396.1|	-	6.3e-08	32.9	1.7	0.0047	17.2	0.2	2.5	2	0	0	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
DAO	PF01266.19	gi|297527372|ref|YP_003669396.1|	-	2.1e-06	26.8	1.6	0.0029	16.5	0.1	3.1	3	0	0	3	3	3	2	FAD	dependent	oxidoreductase
FAD_binding_2	PF00890.19	gi|297527372|ref|YP_003669396.1|	-	2.2e-06	26.7	0.8	0.069	11.9	0.0	3.0	3	0	0	3	3	3	2	FAD	binding	domain
FAD_oxidored	PF12831.2	gi|297527372|ref|YP_003669396.1|	-	4.1e-06	26.1	2.0	0.0025	16.9	0.0	2.5	3	0	0	3	3	3	2	FAD	dependent	oxidoreductase
GIDA	PF01134.17	gi|297527372|ref|YP_003669396.1|	-	6.4e-06	25.2	1.7	0.12	11.1	0.1	3.1	3	0	0	3	3	3	2	Glucose	inhibited	division	protein	A
FAD_binding_3	PF01494.14	gi|297527372|ref|YP_003669396.1|	-	3.9e-05	22.8	0.7	0.18	10.8	0.0	2.2	2	0	0	2	2	2	2	FAD	binding	domain
AlaDh_PNT_C	PF01262.16	gi|297527372|ref|YP_003669396.1|	-	6.6e-05	22.5	2.1	0.061	12.8	0.0	3.0	2	1	1	3	3	3	2	Alanine	dehydrogenase/PNT,	C-terminal	domain
HI0933_like	PF03486.9	gi|297527372|ref|YP_003669396.1|	-	8.4e-05	21.2	0.8	0.011	14.1	0.1	2.2	2	0	0	2	2	2	2	HI0933-like	protein
Shikimate_DH	PF01488.15	gi|297527372|ref|YP_003669396.1|	-	0.0012	18.9	1.5	0.0048	16.9	0.1	2.4	3	0	0	3	3	3	1	Shikimate	/	quinate	5-dehydrogenase
2-Hacid_dh_C	PF02826.14	gi|297527372|ref|YP_003669396.1|	-	0.0026	16.9	0.1	1.5	7.9	0.0	3.0	3	0	0	3	3	3	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
Thi4	PF01946.12	gi|297527372|ref|YP_003669396.1|	-	0.013	14.6	1.3	0.099	11.7	0.1	2.2	2	0	0	2	2	2	0	Thi4	family
NAD_binding_9	PF13454.1	gi|297527372|ref|YP_003669396.1|	-	0.02	14.6	0.6	0.47	10.2	0.1	2.4	2	0	0	2	2	2	0	FAD-NAD(P)-binding
3HCDH_N	PF02737.13	gi|297527372|ref|YP_003669396.1|	-	0.033	13.8	3.0	0.59	9.7	0.0	2.6	3	0	0	3	3	3	0	3-hydroxyacyl-CoA	dehydrogenase,	NAD	binding	domain
F420_oxidored	PF03807.12	gi|297527372|ref|YP_003669396.1|	-	0.061	13.7	0.8	1.6	9.1	0.1	2.8	3	0	0	3	3	3	0	NADP	oxidoreductase	coenzyme	F420-dependent
K_oxygenase	PF13434.1	gi|297527372|ref|YP_003669396.1|	-	0.084	11.7	0.0	0.15	10.9	0.0	1.4	1	0	0	1	1	1	0	L-lysine	6-monooxygenase	(NADPH-requiring)
UDPG_MGDP_dh_N	PF03721.9	gi|297527372|ref|YP_003669396.1|	-	0.12	11.7	0.2	1.6	8.0	0.2	2.3	2	0	0	2	2	2	0	UDP-glucose/GDP-mannose	dehydrogenase	family,	NAD	binding	domain
NTP_transferase	PF00483.18	gi|297527373|ref|YP_003669397.1|	-	2.5e-36	125.2	0.0	3.1e-36	124.9	0.0	1.0	1	0	0	1	1	1	1	Nucleotidyl	transferase
NTP_transf_3	PF12804.2	gi|297527373|ref|YP_003669397.1|	-	2.3e-12	47.2	0.0	3.1e-12	46.8	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.14	gi|297527373|ref|YP_003669397.1|	-	0.00033	20.2	0.0	0.0004	19.9	0.0	1.2	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
Peptidase_M54	PF07998.6	gi|297527374|ref|YP_003669398.1|	-	9.8e-30	103.7	0.1	1.1e-29	103.5	0.0	1.1	1	0	0	1	1	1	1	Peptidase	family	M54
Peptidase_M10	PF00413.19	gi|297527374|ref|YP_003669398.1|	-	9e-05	22.2	0.0	9e-05	22.2	0.0	1.1	1	0	0	1	1	1	1	Matrixin
Peptidase_M43	PF05572.8	gi|297527374|ref|YP_003669398.1|	-	0.013	15.1	0.1	0.023	14.2	0.1	1.5	1	0	0	1	1	1	0	Pregnancy-associated	plasma	protein-A
Reprolysin	PF01421.14	gi|297527374|ref|YP_003669398.1|	-	0.015	14.9	0.0	0.022	14.3	0.0	1.2	1	0	0	1	1	1	0	Reprolysin	(M12B)	family	zinc	metalloprotease
Peptidase_M66	PF10462.4	gi|297527374|ref|YP_003669398.1|	-	0.054	12.3	0.0	0.078	11.8	0.0	1.2	1	0	0	1	1	1	0	Peptidase	M66
Metallopep	PF12044.3	gi|297527374|ref|YP_003669398.1|	-	0.062	11.7	0.1	0.084	11.3	0.1	1.1	1	0	0	1	1	1	0	Putative	peptidase	family
Reprolysin_4	PF13583.1	gi|297527374|ref|YP_003669398.1|	-	0.082	12.4	0.0	0.51	9.8	0.0	2.0	2	0	0	2	2	2	0	Metallo-peptidase	family	M12B	Reprolysin-like
Reprolysin_2	PF13574.1	gi|297527374|ref|YP_003669398.1|	-	0.088	12.8	0.0	0.14	12.2	0.0	1.4	1	0	0	1	1	1	0	Metallo-peptidase	family	M12B	Reprolysin-like
Reprolysin_3	PF13582.1	gi|297527374|ref|YP_003669398.1|	-	0.089	13.3	0.1	0.23	12.0	0.0	1.8	2	0	0	2	2	2	0	Metallo-peptidase	family	M12B	Reprolysin-like
DUF1025	PF06262.6	gi|297527374|ref|YP_003669398.1|	-	0.094	12.5	0.0	0.13	12.0	0.0	1.3	1	0	0	1	1	1	0	Possibl	zinc	metallo-peptidase
Archease	PF01951.11	gi|297527375|ref|YP_003669399.1|	-	1.9e-43	147.7	0.8	2.1e-43	147.5	0.6	1.0	1	0	0	1	1	1	1	Archease	protein	family	(MTH1598/TM1083)
RuBisCO_large	PF00016.15	gi|297527376|ref|YP_003669400.1|	-	7.1e-81	271.4	0.0	9e-81	271.0	0.0	1.1	1	0	0	1	1	1	1	Ribulose	bisphosphate	carboxylase	large	chain,	catalytic	domain
RuBisCO_large_N	PF02788.11	gi|297527376|ref|YP_003669400.1|	-	1.6e-30	105.4	0.0	3.1e-30	104.4	0.0	1.5	1	0	0	1	1	1	1	Ribulose	bisphosphate	carboxylase	large	chain,	N-terminal	domain
DUF697	PF05128.7	gi|297527376|ref|YP_003669400.1|	-	0.037	13.5	0.2	0.13	11.7	0.0	1.8	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF697)
PAP2	PF01569.16	gi|297527377|ref|YP_003669401.1|	-	8.8e-20	70.6	2.2	8.8e-20	70.6	1.6	2.4	2	1	0	2	2	2	1	PAP2	superfamily
PAP2_3	PF14378.1	gi|297527377|ref|YP_003669401.1|	-	1.8e-05	24.3	1.8	1.8e-05	24.3	1.2	2.0	3	0	0	3	3	3	1	PAP2	superfamily
PAP2_C	PF14360.1	gi|297527377|ref|YP_003669401.1|	-	0.00062	19.9	0.4	0.00062	19.9	0.3	3.0	3	0	0	3	3	3	1	PAP2	superfamily	C-terminal
MTS	PF05175.9	gi|297527378|ref|YP_003669402.1|	-	2.1e-36	124.8	0.0	2.3e-36	124.7	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_31	PF13847.1	gi|297527378|ref|YP_003669402.1|	-	2.2e-18	66.2	0.0	3.6e-18	65.6	0.0	1.4	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|297527378|ref|YP_003669402.1|	-	2.8e-14	53.1	0.0	4.9e-14	52.3	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_18	PF12847.2	gi|297527378|ref|YP_003669402.1|	-	1.5e-12	48.0	0.0	2.6e-12	47.2	0.0	1.5	1	1	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|297527378|ref|YP_003669402.1|	-	2.8e-12	46.3	0.0	3.5e-12	46.0	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Met_10	PF02475.11	gi|297527378|ref|YP_003669402.1|	-	6.2e-09	35.7	0.0	7.6e-09	35.4	0.0	1.2	1	0	0	1	1	1	1	Met-10+	like-protein
Methyltransf_25	PF13649.1	gi|297527378|ref|YP_003669402.1|	-	1.8e-07	31.4	0.0	2.6e-07	30.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_16	PF10294.4	gi|297527378|ref|YP_003669402.1|	-	6e-07	29.0	0.0	8e-07	28.6	0.0	1.1	1	0	0	1	1	1	1	Putative	methyltransferase
Methyltransf_11	PF08241.7	gi|297527378|ref|YP_003669402.1|	-	6.8e-07	29.6	0.0	9.8e-07	29.1	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_23	PF13489.1	gi|297527378|ref|YP_003669402.1|	-	8.3e-07	28.8	0.0	1.1e-06	28.4	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|297527378|ref|YP_003669402.1|	-	2.7e-06	27.7	0.0	3.6e-06	27.3	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Cons_hypoth95	PF03602.10	gi|297527378|ref|YP_003669402.1|	-	2.8e-05	23.5	0.0	3.7e-05	23.1	0.0	1.1	1	0	0	1	1	1	1	Conserved	hypothetical	protein	95
Methyltransf_15	PF09445.5	gi|297527378|ref|YP_003669402.1|	-	3.2e-05	23.5	0.0	4.2e-05	23.1	0.0	1.1	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_4	PF02390.12	gi|297527378|ref|YP_003669402.1|	-	6.9e-05	21.9	0.0	0.00011	21.3	0.0	1.2	1	0	0	1	1	1	1	Putative	methyltransferase
UPF0020	PF01170.13	gi|297527378|ref|YP_003669402.1|	-	0.0003	20.4	0.0	0.00039	20.0	0.0	1.1	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
TRM	PF02005.11	gi|297527378|ref|YP_003669402.1|	-	0.00049	19.1	0.0	0.00054	18.9	0.0	1.1	1	0	0	1	1	1	1	N2,N2-dimethylguanosine	tRNA	methyltransferase
GidB	PF02527.10	gi|297527378|ref|YP_003669402.1|	-	0.0013	17.9	0.0	0.0016	17.6	0.0	1.2	1	0	0	1	1	1	1	rRNA	small	subunit	methyltransferase	G
Ubie_methyltran	PF01209.13	gi|297527378|ref|YP_003669402.1|	-	0.0013	17.8	0.0	0.0017	17.5	0.0	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_2	PF00891.13	gi|297527378|ref|YP_003669402.1|	-	0.0046	16.1	0.0	0.0065	15.6	0.0	1.1	1	0	0	1	1	1	1	O-methyltransferase
PCMT	PF01135.14	gi|297527378|ref|YP_003669402.1|	-	0.0079	15.7	0.0	0.012	15.1	0.0	1.2	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
FmrO	PF07091.6	gi|297527378|ref|YP_003669402.1|	-	0.014	14.4	0.0	0.018	14.0	0.0	1.1	1	0	0	1	1	1	0	Ribosomal	RNA	methyltransferase	(FmrO)
N6_Mtase	PF02384.11	gi|297527378|ref|YP_003669402.1|	-	0.015	14.3	0.0	0.033	13.2	0.0	1.5	1	1	1	2	2	2	0	N-6	DNA	Methylase
TehB	PF03848.9	gi|297527378|ref|YP_003669402.1|	-	0.022	13.9	0.0	0.03	13.4	0.0	1.1	1	0	0	1	1	1	0	Tellurite	resistance	protein	TehB
RrnaAD	PF00398.15	gi|297527378|ref|YP_003669402.1|	-	0.026	13.5	0.0	0.032	13.2	0.0	1.1	1	0	0	1	1	1	0	Ribosomal	RNA	adenine	dimethylase
Methyltransf_3	PF01596.12	gi|297527378|ref|YP_003669402.1|	-	0.04	12.9	0.0	0.054	12.5	0.0	1.1	1	0	0	1	1	1	0	O-methyltransferase
Methyltransf_32	PF13679.1	gi|297527378|ref|YP_003669402.1|	-	0.084	12.5	0.0	0.1	12.2	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
DUF633	PF04816.7	gi|297527378|ref|YP_003669402.1|	-	0.084	12.1	0.0	0.2	10.9	0.0	1.6	1	1	1	2	2	2	0	Family	of	unknown	function	(DUF633)
CMAS	PF02353.15	gi|297527378|ref|YP_003669402.1|	-	0.11	11.5	0.0	0.13	11.3	0.0	1.1	1	0	0	1	1	1	0	Mycolic	acid	cyclopropane	synthetase
KOW	PF00467.24	gi|297527380|ref|YP_003669404.1|	-	5.7e-05	22.6	0.8	0.0001	21.8	0.6	1.4	1	0	0	1	1	1	1	KOW	motif
Ribosomal_L14e	PF01929.12	gi|297527380|ref|YP_003669404.1|	-	0.003	17.8	0.0	0.0047	17.2	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L14
Cytidylate_kin2	PF13189.1	gi|297527381|ref|YP_003669405.1|	-	1.4e-17	64.1	1.3	7.2e-16	58.5	0.9	2.0	1	1	0	1	1	1	1	Cytidylate	kinase-like	family
AAA_18	PF13238.1	gi|297527381|ref|YP_003669405.1|	-	8e-17	61.7	0.1	1.1e-16	61.2	0.1	1.3	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|297527381|ref|YP_003669405.1|	-	1.3e-11	45.3	0.6	2.4e-11	44.4	0.4	1.6	1	1	0	1	1	1	1	AAA	domain
ADK	PF00406.17	gi|297527381|ref|YP_003669405.1|	-	1.8e-05	24.6	0.1	7.2e-05	22.6	0.0	1.9	1	1	1	2	2	2	1	Adenylate	kinase
AAA_19	PF13245.1	gi|297527381|ref|YP_003669405.1|	-	0.00046	19.8	0.0	0.00082	19.0	0.0	1.5	1	0	0	1	1	1	1	Part	of	AAA	domain
Cytidylate_kin	PF02224.13	gi|297527381|ref|YP_003669405.1|	-	0.00058	19.3	0.1	0.00092	18.6	0.0	1.4	1	1	0	1	1	1	1	Cytidylate	kinase
AAA_28	PF13521.1	gi|297527381|ref|YP_003669405.1|	-	0.00061	19.7	0.0	0.00084	19.3	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA	PF00004.24	gi|297527381|ref|YP_003669405.1|	-	0.0012	19.0	0.0	0.002	18.3	0.0	1.4	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_22	PF13401.1	gi|297527381|ref|YP_003669405.1|	-	0.0014	18.7	0.0	0.0024	18.0	0.0	1.4	1	0	0	1	1	1	1	AAA	domain
AAA_33	PF13671.1	gi|297527381|ref|YP_003669405.1|	-	0.0015	18.3	0.0	0.022	14.6	0.0	2.2	2	0	0	2	2	2	1	AAA	domain
KTI12	PF08433.5	gi|297527381|ref|YP_003669405.1|	-	0.0031	16.7	0.0	0.0053	16.0	0.0	1.4	1	0	0	1	1	1	1	Chromatin	associated	protein	KTI12
NTPase_1	PF03266.10	gi|297527381|ref|YP_003669405.1|	-	0.0038	16.9	0.0	0.0096	15.6	0.0	1.6	2	0	0	2	2	2	1	NTPase
Thymidylate_kin	PF02223.12	gi|297527381|ref|YP_003669405.1|	-	0.0072	15.7	0.0	0.9	8.8	0.0	2.2	2	0	0	2	2	2	1	Thymidylate	kinase
SRP54	PF00448.17	gi|297527381|ref|YP_003669405.1|	-	0.023	14.1	0.0	0.034	13.5	0.0	1.4	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
PRK	PF00485.13	gi|297527381|ref|YP_003669405.1|	-	0.037	13.5	0.2	0.83	9.1	0.0	2.2	1	1	0	2	2	2	0	Phosphoribulokinase	/	Uridine	kinase	family
Zeta_toxin	PF06414.7	gi|297527381|ref|YP_003669405.1|	-	0.057	12.5	0.0	0.096	11.7	0.0	1.4	1	0	0	1	1	1	0	Zeta	toxin
NACHT	PF05729.7	gi|297527381|ref|YP_003669405.1|	-	0.067	12.8	0.0	0.14	11.8	0.0	1.6	2	0	0	2	2	2	0	NACHT	domain
AAA_5	PF07728.9	gi|297527381|ref|YP_003669405.1|	-	0.088	12.5	0.0	0.23	11.1	0.0	1.8	1	1	0	1	1	1	0	AAA	domain	(dynein-related	subfamily)
RuvB_N	PF05496.7	gi|297527381|ref|YP_003669405.1|	-	0.1	11.6	0.1	0.52	9.3	0.0	2.0	1	1	1	2	2	2	0	Holliday	junction	DNA	helicase	ruvB	N-terminus
Ribosomal_L34e	PF01199.13	gi|297527382|ref|YP_003669406.1|	-	2.5e-29	101.3	4.1	2.8e-29	101.1	2.8	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L34e
DUF4428	PF14471.1	gi|297527382|ref|YP_003669406.1|	-	0.0054	16.4	0.1	0.38	10.5	0.0	2.2	2	0	0	2	2	2	1	Domain	of	unknown	function	(DUF4428)
zf-P11	PF03854.9	gi|297527382|ref|YP_003669406.1|	-	0.019	14.4	1.5	0.73	9.3	0.0	2.2	2	0	0	2	2	2	0	P-11	zinc	finger
Zn_ribbon_recom	PF13408.1	gi|297527382|ref|YP_003669406.1|	-	0.06	13.6	0.3	0.06	13.6	0.2	1.6	2	0	0	2	2	2	0	Recombinase	zinc	beta	ribbon	domain
zf-C4_ClpX	PF06689.8	gi|297527382|ref|YP_003669406.1|	-	0.063	12.8	0.0	5	6.7	0.0	2.2	2	0	0	2	2	2	0	ClpX	C4-type	zinc	finger
zf-RING_2	PF13639.1	gi|297527382|ref|YP_003669406.1|	-	0.066	13.0	0.0	0.16	11.8	0.0	1.6	1	1	0	1	1	1	0	Ring	finger	domain
zf-HIT	PF04438.11	gi|297527382|ref|YP_003669406.1|	-	0.12	11.9	2.6	2.3	7.9	0.2	2.2	2	0	0	2	2	2	0	HIT	zinc	finger
Gin	PF10764.4	gi|297527382|ref|YP_003669406.1|	-	0.15	11.8	0.2	7.6	6.3	0.0	2.2	2	0	0	2	2	2	0	Inhibitor	of	sigma-G	Gin
zf-FPG_IleRS	PF06827.9	gi|297527382|ref|YP_003669406.1|	-	0.24	11.0	2.3	0.86	9.3	0.2	2.2	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
SNARE_assoc	PF09335.6	gi|297527383|ref|YP_003669407.1|	-	0.0036	17.4	1.1	0.0036	17.4	0.8	1.6	2	0	0	2	2	2	1	SNARE	associated	Golgi	protein
DUF4014	PF13198.1	gi|297527383|ref|YP_003669407.1|	-	7.8	6.9	8.5	13	6.2	2.1	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4014)
SecY	PF00344.15	gi|297527384|ref|YP_003669408.1|	-	4.2e-84	282.4	20.5	6.2e-84	281.8	14.2	1.2	1	0	0	1	1	1	1	SecY	translocase
Plug_translocon	PF10559.4	gi|297527384|ref|YP_003669408.1|	-	4.6e-09	35.6	0.6	1.6e-08	33.9	0.4	2.0	1	0	0	1	1	1	1	Plug	domain	of	Sec61p
Ribosomal_L18e	PF00828.14	gi|297527385|ref|YP_003669409.1|	-	2e-33	115.4	0.3	2.8e-33	115.0	0.2	1.2	1	0	0	1	1	1	1	Ribosomal	protein	L18e/L15
Ribosomal_L30	PF00327.15	gi|297527386|ref|YP_003669410.1|	-	2.4e-15	55.8	0.1	4.3e-15	55.0	0.0	1.4	1	0	0	1	1	1	1	Ribosomal	protein	L30p/L7e
Ribosomal_S5_C	PF03719.10	gi|297527387|ref|YP_003669411.1|	-	2.3e-27	94.0	0.4	4.4e-27	93.1	0.3	1.4	1	0	0	1	1	1	1	Ribosomal	protein	S5,	C-terminal	domain
Ribosomal_S5	PF00333.15	gi|297527387|ref|YP_003669411.1|	-	8.1e-21	73.5	3.6	1.7e-20	72.4	1.0	2.3	3	0	0	3	3	3	1	Ribosomal	protein	S5,	N-terminal	domain
FaeA	PF04703.7	gi|297527387|ref|YP_003669411.1|	-	0.13	12.4	0.1	0.24	11.5	0.0	1.4	1	0	0	1	1	1	0	FaeA-like	protein
Ribosomal_L18p	PF00861.17	gi|297527388|ref|YP_003669412.1|	-	2.4e-35	121.3	0.1	3e-35	121.0	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	L18p/L5e	family
Ribosomal_L18_c	PF14204.1	gi|297527388|ref|YP_003669412.1|	-	3.8e-11	43.4	0.4	7.2e-11	42.5	0.0	1.5	2	0	0	2	2	2	1	Ribosomal	L18	C-terminal	region
Ribosomal_L19e	PF01280.15	gi|297527389|ref|YP_003669413.1|	-	1.4e-56	190.3	14.8	1.6e-56	190.1	10.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L19e
Ribosomal_L32e	PF01655.13	gi|297527390|ref|YP_003669414.1|	-	3.4e-36	123.6	0.1	4.4e-36	123.2	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L32
Ribosomal_L6	PF00347.18	gi|297527391|ref|YP_003669415.1|	-	7e-25	87.3	12.6	6.6e-16	58.5	2.3	2.1	2	0	0	2	2	2	2	Ribosomal	protein	L6
OspE	PF02471.12	gi|297527391|ref|YP_003669415.1|	-	0.11	12.4	0.7	0.52	10.2	0.0	2.0	1	1	1	2	2	2	0	Borrelia	outer	surface	protein	E
DUF2067	PF09840.4	gi|297527391|ref|YP_003669415.1|	-	2.3	7.6	7.8	1.3	8.5	0.1	2.6	3	0	0	3	3	3	0	Uncharacterized	protein	conserved	in	archaea	(DUF2067)
DUF1108	PF06531.6	gi|297527391|ref|YP_003669415.1|	-	2.9	8.1	6.1	2.3	8.4	0.1	2.9	2	1	1	3	3	3	0	Protein	of	unknown	function	(DUF1108)
Ribosomal_S8	PF00410.14	gi|297527392|ref|YP_003669416.1|	-	7.4e-26	90.5	0.0	9.6e-26	90.1	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S8
SPATA6	PF14909.1	gi|297527392|ref|YP_003669416.1|	-	0.081	12.9	0.0	0.14	12.2	0.0	1.3	1	0	0	1	1	1	0	Spermatogenesis-assoc	protein	6
Ribosomal_S14	PF00253.16	gi|297527393|ref|YP_003669417.1|	-	5.2e-17	60.9	3.6	5.8e-17	60.8	2.5	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S14p/S29e
zf-FPG_IleRS	PF06827.9	gi|297527393|ref|YP_003669417.1|	-	0.0026	17.3	2.2	0.0039	16.7	1.5	1.3	1	0	0	1	1	1	1	Zinc	finger	found	in	FPG	and	IleRS
Ribosomal_L37ae	PF01780.14	gi|297527393|ref|YP_003669417.1|	-	0.023	14.5	0.2	0.026	14.4	0.1	1.1	1	0	0	1	1	1	0	Ribosomal	L37ae	protein	family
Gin	PF10764.4	gi|297527393|ref|YP_003669417.1|	-	0.037	13.7	0.6	0.047	13.3	0.4	1.2	1	0	0	1	1	1	0	Inhibitor	of	sigma-G	Gin
Zn_Tnp_IS1595	PF12760.2	gi|297527393|ref|YP_003669417.1|	-	0.055	13.2	1.7	0.067	13.0	1.2	1.2	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
DZR	PF12773.2	gi|297527393|ref|YP_003669417.1|	-	0.16	11.7	0.8	0.32	10.8	0.6	1.5	1	1	0	1	1	1	0	Double	zinc	ribbon
DUF2039	PF10217.4	gi|297527393|ref|YP_003669417.1|	-	0.24	11.4	1.3	0.36	10.8	0.9	1.5	1	1	0	1	1	1	0	Uncharacterized	conserved	protein	(DUF2039)
Ribosomal_L5_C	PF00673.16	gi|297527394|ref|YP_003669418.1|	-	4.8e-27	93.5	0.0	9.5e-27	92.5	0.0	1.5	2	0	0	2	2	2	1	ribosomal	L5P	family	C-terminus
Ribosomal_L5	PF00281.14	gi|297527394|ref|YP_003669418.1|	-	4.9e-18	64.6	0.1	8.8e-18	63.8	0.1	1.4	1	0	0	1	1	1	1	Ribosomal	protein	L5
UPF0147	PF03685.8	gi|297527394|ref|YP_003669418.1|	-	0.0013	18.5	0.2	0.0035	17.1	0.0	1.7	2	0	0	2	2	2	1	Uncharacterised	protein	family	(UPF0147)
Ribosomal_S4e	PF00900.15	gi|297527395|ref|YP_003669419.1|	-	3.1e-29	100.4	0.6	5.6e-29	99.6	0.4	1.5	1	0	0	1	1	1	1	Ribosomal	family	S4e
RS4NT	PF08071.7	gi|297527395|ref|YP_003669419.1|	-	1e-18	66.8	5.7	1e-18	66.8	4.0	1.8	2	0	0	2	2	2	1	RS4NT	(NUC023)	domain
S4	PF01479.20	gi|297527395|ref|YP_003669419.1|	-	8.7e-15	53.8	0.2	4.5e-14	51.6	0.1	2.2	2	0	0	2	2	2	1	S4	domain
KOW	PF00467.24	gi|297527395|ref|YP_003669419.1|	-	0.0027	17.3	2.2	0.0087	15.7	1.6	2.0	1	0	0	1	1	1	1	KOW	motif
KOW	PF00467.24	gi|297527396|ref|YP_003669420.1|	-	8e-06	25.3	0.5	1.8e-05	24.2	0.3	1.6	1	0	0	1	1	1	1	KOW	motif
SH3_2	PF07653.12	gi|297527396|ref|YP_003669420.1|	-	0.037	13.5	0.1	0.58	9.6	0.1	2.2	1	1	0	1	1	1	0	Variant	SH3	domain
Ribosomal_L14	PF00238.14	gi|297527397|ref|YP_003669421.1|	-	1.1e-37	128.4	0.0	1.3e-37	128.2	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L14p/L23e
FeoA	PF04023.9	gi|297527397|ref|YP_003669421.1|	-	0.073	13.0	0.8	6.3	6.8	0.0	2.3	1	1	1	2	2	2	0	FeoA	domain
Ribosomal_S17	PF00366.15	gi|297527398|ref|YP_003669422.1|	-	1.9e-26	91.8	4.1	2.4e-26	91.5	2.9	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S17
zf-C3H1	PF10650.4	gi|297527398|ref|YP_003669422.1|	-	0.14	11.6	0.6	0.22	11.0	0.4	1.3	1	0	0	1	1	1	0	Putative	zinc-finger	domain
UPF0086	PF01868.11	gi|297527399|ref|YP_003669423.1|	-	4.7e-29	99.8	0.3	5.2e-29	99.7	0.2	1.0	1	0	0	1	1	1	1	Domain	of	unknown	function	UPF0086
Ribosomal_L29	PF00831.18	gi|297527400|ref|YP_003669424.1|	-	1.9e-21	75.5	8.1	2.1e-21	75.3	5.6	1.0	1	0	0	1	1	1	1	Ribosomal	L29	protein
IFT57	PF10498.4	gi|297527400|ref|YP_003669424.1|	-	0.059	12.1	0.2	0.064	11.9	0.1	1.0	1	0	0	1	1	1	0	Intra-flagellar	transport	protein	57
Enkurin	PF13864.1	gi|297527400|ref|YP_003669424.1|	-	0.16	12.2	1.4	0.18	12.0	1.0	1.2	1	0	0	1	1	1	0	Calmodulin-binding
PaaSYMP	PF14738.1	gi|297527400|ref|YP_003669424.1|	-	0.45	10.2	4.7	0.46	10.1	3.2	1.2	1	0	0	1	1	1	0	Solute	carrier	(proton/amino	acid	symporter),	TRAMD3	or	PAT1
Ribosomal_S3_C	PF00189.15	gi|297527401|ref|YP_003669425.1|	-	2.8e-15	56.2	1.1	5.5e-15	55.3	0.3	1.8	2	1	0	2	2	2	1	Ribosomal	protein	S3,	C-terminal	domain
KH_2	PF07650.12	gi|297527401|ref|YP_003669425.1|	-	4.1e-09	35.8	0.0	9e-09	34.7	0.0	1.6	1	0	0	1	1	1	1	KH	domain
KH_1	PF00013.24	gi|297527401|ref|YP_003669425.1|	-	4.6e-05	22.9	0.5	0.00023	20.7	0.0	2.3	3	0	0	3	3	3	1	KH	domain
KH_4	PF13083.1	gi|297527401|ref|YP_003669425.1|	-	0.015	14.9	0.0	0.035	13.7	0.0	1.7	1	0	0	1	1	1	0	KH	domain
KH_3	PF13014.1	gi|297527401|ref|YP_003669425.1|	-	0.033	13.8	4.9	0.088	12.4	1.3	2.5	2	0	0	2	2	2	0	KH	domain
Ribosomal_L22	PF00237.14	gi|297527402|ref|YP_003669426.1|	-	7.9e-38	128.6	0.2	9.6e-38	128.3	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L22p/L17e
Ribosomal_S19	PF00203.16	gi|297527403|ref|YP_003669427.1|	-	6.3e-32	109.0	0.6	8.2e-32	108.6	0.4	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S19
bZIP_Maf	PF03131.12	gi|297527403|ref|YP_003669427.1|	-	0.017	15.3	0.6	0.029	14.6	0.4	1.3	1	0	0	1	1	1	0	bZIP	Maf	transcription	factor
VWA_CoxE	PF05762.9	gi|297527404|ref|YP_003669428.1|	-	2.3e-09	36.7	0.0	4e-09	35.9	0.0	1.3	1	0	0	1	1	1	1	VWA	domain	containing	CoxE-like	protein
VWA_2	PF13519.1	gi|297527404|ref|YP_003669428.1|	-	0.15	12.1	0.0	0.38	10.8	0.0	1.7	1	1	0	1	1	1	0	von	Willebrand	factor	type	A	domain
AAA_5	PF07728.9	gi|297527405|ref|YP_003669429.1|	-	7.4e-18	64.6	0.0	1.1e-17	64.0	0.0	1.3	1	0	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
AAA	PF00004.24	gi|297527405|ref|YP_003669429.1|	-	0.00053	20.2	0.1	0.0028	17.8	0.0	2.2	2	1	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_3	PF07726.6	gi|297527405|ref|YP_003669429.1|	-	0.00072	19.1	0.0	0.0047	16.5	0.0	2.1	1	1	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_30	PF13604.1	gi|297527405|ref|YP_003669429.1|	-	0.015	14.8	0.0	0.023	14.2	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
AAA_19	PF13245.1	gi|297527405|ref|YP_003669429.1|	-	0.018	14.8	0.0	0.033	13.9	0.0	1.4	1	0	0	1	1	1	0	Part	of	AAA	domain
Sigma54_activat	PF00158.21	gi|297527405|ref|YP_003669429.1|	-	0.022	14.2	0.0	6.4	6.2	0.0	2.4	3	0	0	3	3	3	0	Sigma-54	interaction	domain
AAA_18	PF13238.1	gi|297527405|ref|YP_003669429.1|	-	0.029	14.6	0.0	0.064	13.5	0.0	1.7	1	0	0	1	1	1	0	AAA	domain
AAA_2	PF07724.9	gi|297527405|ref|YP_003669429.1|	-	0.057	13.3	0.0	0.1	12.5	0.0	1.4	1	0	0	1	1	1	0	AAA	domain	(Cdc48	subfamily)
AAA_6	PF12774.2	gi|297527405|ref|YP_003669429.1|	-	0.1	12.0	0.0	0.15	11.5	0.0	1.2	1	0	0	1	1	1	0	Hydrolytic	ATP	binding	site	of	dynein	motor	region	D1
Mg_chelatase	PF01078.16	gi|297527405|ref|YP_003669429.1|	-	0.11	11.6	0.0	1.5	7.9	0.0	2.1	2	0	0	2	2	2	0	Magnesium	chelatase,	subunit	ChlI
AAA_11	PF13086.1	gi|297527405|ref|YP_003669429.1|	-	0.13	11.7	0.0	0.23	10.9	0.0	1.7	1	1	0	1	1	1	0	AAA	domain
AAA_17	PF13207.1	gi|297527405|ref|YP_003669429.1|	-	0.45	11.3	2.6	2.9	8.7	1.7	2.4	1	1	0	1	1	1	0	AAA	domain
Ribosomal_L2_C	PF03947.13	gi|297527407|ref|YP_003669431.1|	-	1.5e-42	144.4	3.9	2.1e-42	143.9	2.7	1.2	1	0	0	1	1	1	1	Ribosomal	Proteins	L2,	C-terminal	domain
Ribosomal_L2	PF00181.18	gi|297527407|ref|YP_003669431.1|	-	2.4e-14	53.0	0.0	5.6e-14	51.8	0.0	1.7	1	0	0	1	1	1	1	Ribosomal	Proteins	L2,	RNA	binding	domain
Ribosomal_L23	PF00276.15	gi|297527408|ref|YP_003669432.1|	-	4.1e-19	68.3	1.8	6e-19	67.7	1.2	1.3	1	1	0	1	1	1	1	Ribosomal	protein	L23
AICARFT_IMPCHas	PF01808.13	gi|297527408|ref|YP_003669432.1|	-	0.048	12.7	0.1	0.048	12.7	0.1	1.0	1	0	0	1	1	1	0	AICARFT/IMPCHase	bienzyme
TusA	PF01206.12	gi|297527408|ref|YP_003669432.1|	-	0.099	12.2	0.1	0.15	11.6	0.0	1.4	1	0	0	1	1	1	0	Sulfurtransferase	TusA
Ribosomal_L4	PF00573.17	gi|297527409|ref|YP_003669433.1|	-	4.5e-40	137.0	0.0	5.4e-40	136.8	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L4/L1	family
Autoind_bind	PF03472.10	gi|297527409|ref|YP_003669433.1|	-	0.088	12.0	0.1	0.14	11.4	0.1	1.3	1	0	0	1	1	1	0	Autoinducer	binding	domain
Ribosomal_L3	PF00297.17	gi|297527410|ref|YP_003669434.1|	-	1.9e-56	191.4	0.0	2.3e-56	191.0	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L3
Disaggr_repeat	PF06848.6	gi|297527410|ref|YP_003669434.1|	-	0.063	12.6	0.1	0.69	9.3	0.0	2.0	2	0	0	2	2	2	0	Disaggregatase	related	repeat
Methyltrn_RNA_3	PF02598.12	gi|297527411|ref|YP_003669435.1|	-	6.7e-34	117.5	0.0	7.8e-34	117.3	0.0	1.0	1	0	0	1	1	1	1	Putative	RNA	methyltransferase
AAA_10	PF12846.2	gi|297527413|ref|YP_003669437.1|	-	1.1e-23	84.1	1.4	3.3e-14	53.0	0.0	3.0	2	1	1	3	3	3	2	AAA-like	domain
DUF853	PF05872.7	gi|297527413|ref|YP_003669437.1|	-	1.2e-12	47.0	0.0	2e-06	26.4	0.0	2.2	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
DUF87	PF01935.12	gi|297527413|ref|YP_003669437.1|	-	1.4e-08	34.8	1.5	2.8e-08	33.8	0.1	2.1	2	0	0	2	2	2	1	Domain	of	unknown	function	DUF87
TrwB_AAD_bind	PF10412.4	gi|297527413|ref|YP_003669437.1|	-	5.3e-07	28.6	0.0	0.00052	18.7	0.0	2.3	2	0	0	2	2	2	2	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
TraG-D_C	PF12696.2	gi|297527413|ref|YP_003669437.1|	-	1.9e-05	24.5	0.0	5.4e-05	23.0	0.0	1.7	2	0	0	2	2	2	1	TraM	recognition	site	of	TraD	and	TraG
FtsK_SpoIIIE	PF01580.13	gi|297527413|ref|YP_003669437.1|	-	0.00012	21.6	0.0	0.00034	20.1	0.0	1.7	2	0	0	2	2	2	1	FtsK/SpoIIIE	family
ABC_tran	PF00005.22	gi|297527413|ref|YP_003669437.1|	-	0.00072	19.8	0.1	0.063	13.5	0.0	2.6	2	0	0	2	2	2	1	ABC	transporter
AAA_22	PF13401.1	gi|297527413|ref|YP_003669437.1|	-	0.00085	19.4	1.0	0.83	9.7	0.1	2.9	3	1	0	3	3	3	2	AAA	domain
Arch_ATPase	PF01637.13	gi|297527413|ref|YP_003669437.1|	-	0.0041	16.8	1.5	0.02	14.5	0.0	2.5	3	0	0	3	3	3	1	Archaeal	ATPase
AAA_14	PF13173.1	gi|297527413|ref|YP_003669437.1|	-	0.0064	16.3	0.0	0.83	9.5	0.0	2.5	2	0	0	2	2	2	1	AAA	domain
T2SE	PF00437.15	gi|297527413|ref|YP_003669437.1|	-	0.012	14.5	0.1	0.025	13.4	0.1	1.5	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
AAA	PF00004.24	gi|297527413|ref|YP_003669437.1|	-	0.012	15.7	0.2	1.9	8.6	0.1	3.1	2	1	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
NACHT	PF05729.7	gi|297527413|ref|YP_003669437.1|	-	0.014	15.0	0.1	0.046	13.3	0.1	1.8	1	0	0	1	1	1	0	NACHT	domain
AAA_23	PF13476.1	gi|297527413|ref|YP_003669437.1|	-	0.025	14.9	1.1	0.12	12.6	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
ResIII	PF04851.10	gi|297527413|ref|YP_003669437.1|	-	0.03	14.1	0.0	0.45	10.3	0.0	2.2	2	0	0	2	2	2	0	Type	III	restriction	enzyme,	res	subunit
AAA_29	PF13555.1	gi|297527413|ref|YP_003669437.1|	-	0.035	13.6	0.0	0.079	12.4	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_19	PF13245.1	gi|297527413|ref|YP_003669437.1|	-	0.18	11.6	0.0	0.41	10.4	0.0	1.6	1	0	0	1	1	1	0	Part	of	AAA	domain
DUF2062	PF09835.4	gi|297527414|ref|YP_003669438.1|	-	0.013	15.0	1.5	0.014	15.0	1.0	1.0	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2062)
Pkr1	PF08636.5	gi|297527414|ref|YP_003669438.1|	-	0.054	13.5	5.5	0.057	13.4	3.8	1.1	1	0	0	1	1	1	0	ER	protein	Pkr1
CbiQ	PF02361.11	gi|297527414|ref|YP_003669438.1|	-	3.9	6.9	8.0	4.5	6.7	5.6	1.0	1	0	0	1	1	1	0	Cobalt	transport	protein
DUF340	PF03956.8	gi|297527416|ref|YP_003669440.1|	-	0.025	13.8	0.4	0.03	13.6	0.3	1.0	1	0	0	1	1	1	0	Membrane	protein	of	unknown	function	(DUF340)
EI24	PF07264.6	gi|297527416|ref|YP_003669440.1|	-	0.21	10.9	6.0	0.28	10.6	4.1	1.1	1	0	0	1	1	1	0	Etoposide-induced	protein	2.4	(EI24)
Trep_Strep	PF09605.5	gi|297527416|ref|YP_003669440.1|	-	0.91	9.1	6.8	1.1	8.9	4.7	1.1	1	0	0	1	1	1	0	Hypothetical	bacterial	integral	membrane	protein	(Trep_Strep)
COX2-transmemb	PF09125.5	gi|297527416|ref|YP_003669440.1|	-	7.1	6.2	9.4	0.27	10.8	2.6	1.6	2	0	0	2	2	2	0	Cytochrome	C	oxidase	subunit	II,	transmembrane
PAPS_reduct	PF01507.14	gi|297527417|ref|YP_003669441.1|	-	5.3e-38	130.5	0.0	1.1e-37	129.4	0.0	1.6	1	0	0	1	1	1	1	Phosphoadenosine	phosphosulfate	reductase	family
Fer4_8	PF13183.1	gi|297527417|ref|YP_003669441.1|	-	5.8e-07	29.4	0.4	0.021	14.8	0.1	2.6	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|297527417|ref|YP_003669441.1|	-	5.7e-05	22.9	8.8	0.00014	21.6	6.1	1.6	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_17	PF13534.1	gi|297527417|ref|YP_003669441.1|	-	0.00018	21.7	3.5	0.44	10.9	0.1	2.8	3	0	0	3	3	3	2	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|297527417|ref|YP_003669441.1|	-	0.00031	21.0	9.5	0.00036	20.8	5.6	1.9	2	1	0	2	2	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|297527417|ref|YP_003669441.1|	-	0.00059	19.5	10.0	0.00059	19.5	6.9	1.7	2	0	0	2	2	2	1	4Fe-4S	dicluster	domain
UPF0113	PF03657.8	gi|297527417|ref|YP_003669441.1|	-	0.002	17.7	0.2	0.0039	16.8	0.1	1.4	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0113)
Fer4_9	PF13187.1	gi|297527417|ref|YP_003669441.1|	-	0.0049	17.1	9.8	0.072	13.3	7.4	2.4	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_18	PF13746.1	gi|297527417|ref|YP_003669441.1|	-	0.013	15.9	10.3	0.26	11.7	0.1	2.9	3	0	0	3	3	3	0	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|297527417|ref|YP_003669441.1|	-	0.094	13.3	19.1	0.35	11.5	2.4	2.8	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|297527417|ref|YP_003669441.1|	-	0.11	13.2	14.9	2	9.2	1.7	3.4	2	1	2	4	4	4	0	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.2	gi|297527417|ref|YP_003669441.1|	-	0.18	11.8	18.6	0.06	13.2	2.7	2.9	3	0	0	3	3	3	0	4Fe-4S	binding	domain
Fer4	PF00037.22	gi|297527417|ref|YP_003669441.1|	-	0.79	9.4	15.9	0.25	10.9	3.4	2.7	2	0	0	2	2	2	0	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|297527417|ref|YP_003669441.1|	-	4.2	7.4	12.2	0.28	11.1	1.6	2.6	2	0	0	2	2	2	0	4Fe-4S	binding	domain
DEAD	PF00270.24	gi|297527418|ref|YP_003669442.1|	-	6.3e-28	97.3	0.0	4.1e-27	94.7	0.0	2.3	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
Helicase_C	PF00271.26	gi|297527418|ref|YP_003669442.1|	-	7e-17	61.0	0.2	1.2e-15	57.1	0.1	2.8	2	0	0	2	2	2	1	Helicase	conserved	C-terminal	domain
DEAD_assoc	PF08494.6	gi|297527418|ref|YP_003669442.1|	-	1.1e-13	51.3	0.0	5.5e-13	49.0	0.0	2.1	2	0	0	2	2	2	1	DEAD/H	associated
ResIII	PF04851.10	gi|297527418|ref|YP_003669442.1|	-	1e-06	28.7	0.9	2.5e-06	27.4	0.1	2.0	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
zf-ribbon_3	PF13248.1	gi|297527418|ref|YP_003669442.1|	-	0.012	14.8	0.1	0.021	13.9	0.1	1.4	1	0	0	1	1	1	0	zinc-ribbon	domain
UPF0547	PF10571.4	gi|297527418|ref|YP_003669442.1|	-	0.012	15.2	1.7	0.58	9.9	0.0	2.4	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
UvrD-helicase	PF00580.16	gi|297527418|ref|YP_003669442.1|	-	0.013	14.8	0.0	0.06	12.6	0.0	1.8	1	1	1	2	2	2	0	UvrD/REP	helicase	N-terminal	domain
PhoH	PF02562.11	gi|297527418|ref|YP_003669442.1|	-	0.015	14.5	0.0	0.066	12.4	0.0	2.1	1	0	0	1	1	1	0	PhoH-like	protein
AAA_22	PF13401.1	gi|297527418|ref|YP_003669442.1|	-	0.023	14.8	0.1	0.11	12.6	0.0	2.1	1	1	0	1	1	1	0	AAA	domain
AAA_19	PF13245.1	gi|297527418|ref|YP_003669442.1|	-	0.027	14.2	0.0	0.19	11.4	0.0	2.3	2	0	0	2	2	2	0	Part	of	AAA	domain
EAL	PF00563.15	gi|297527418|ref|YP_003669442.1|	-	0.057	12.8	0.7	0.61	9.5	0.1	2.5	1	1	0	2	2	2	0	EAL	domain
HypA	PF01155.14	gi|297527418|ref|YP_003669442.1|	-	0.062	12.9	0.1	0.16	11.6	0.1	1.6	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
AAA_30	PF13604.1	gi|297527418|ref|YP_003669442.1|	-	0.18	11.3	0.0	0.34	10.4	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA_10	PF12846.2	gi|297527419|ref|YP_003669443.1|	-	3.5e-32	112.0	0.0	4.9e-32	111.5	0.0	1.1	1	0	0	1	1	1	1	AAA-like	domain
DUF87	PF01935.12	gi|297527419|ref|YP_003669443.1|	-	1.5e-16	60.9	1.0	7.5e-16	58.6	0.7	2.1	1	1	0	1	1	1	1	Domain	of	unknown	function	DUF87
FtsK_SpoIIIE	PF01580.13	gi|297527419|ref|YP_003669443.1|	-	8.8e-07	28.6	0.0	1.6e-06	27.7	0.0	1.3	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
AAA_22	PF13401.1	gi|297527419|ref|YP_003669443.1|	-	2.5e-06	27.6	0.1	0.001	19.1	0.0	2.4	2	0	0	2	2	2	1	AAA	domain
TrwB_AAD_bind	PF10412.4	gi|297527419|ref|YP_003669443.1|	-	2.4e-05	23.1	0.0	7e-05	21.6	0.0	1.6	2	0	0	2	2	2	1	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
KaiC	PF06745.8	gi|297527419|ref|YP_003669443.1|	-	9.5e-05	21.6	0.0	0.00098	18.3	0.0	2.1	2	0	0	2	2	2	1	KaiC
AAA_16	PF13191.1	gi|297527419|ref|YP_003669443.1|	-	0.00014	21.8	0.0	0.00049	20.1	0.0	1.7	2	0	0	2	2	2	1	AAA	ATPase	domain
DUF2075	PF09848.4	gi|297527419|ref|YP_003669443.1|	-	0.00023	20.2	0.0	0.00036	19.6	0.0	1.2	1	0	0	1	1	1	1	Uncharacterized	conserved	protein	(DUF2075)
AAA_19	PF13245.1	gi|297527419|ref|YP_003669443.1|	-	0.00055	19.6	0.0	0.0011	18.6	0.0	1.4	1	0	0	1	1	1	1	Part	of	AAA	domain
AAA_18	PF13238.1	gi|297527419|ref|YP_003669443.1|	-	0.003	17.8	0.0	0.0071	16.6	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|297527419|ref|YP_003669443.1|	-	0.0034	18.2	0.0	0.0077	17.0	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
DUF853	PF05872.7	gi|297527419|ref|YP_003669443.1|	-	0.0035	15.7	0.0	0.019	13.3	0.0	1.8	2	0	0	2	2	2	1	Bacterial	protein	of	unknown	function	(DUF853)
Sigma54_activat	PF00158.21	gi|297527419|ref|YP_003669443.1|	-	0.0075	15.7	0.0	0.014	14.9	0.0	1.3	1	0	0	1	1	1	1	Sigma-54	interaction	domain
Zot	PF05707.7	gi|297527419|ref|YP_003669443.1|	-	0.0078	15.7	0.0	0.25	10.7	0.0	2.3	2	0	0	2	2	2	1	Zonular	occludens	toxin	(Zot)
T2SE	PF00437.15	gi|297527419|ref|YP_003669443.1|	-	0.0089	14.9	0.0	0.015	14.2	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
PhoH	PF02562.11	gi|297527419|ref|YP_003669443.1|	-	0.012	14.9	0.0	0.12	11.5	0.0	2.1	2	0	0	2	2	2	0	PhoH-like	protein
RNA_helicase	PF00910.17	gi|297527419|ref|YP_003669443.1|	-	0.012	15.7	0.0	0.035	14.2	0.0	1.8	1	0	0	1	1	1	0	RNA	helicase
DUF815	PF05673.8	gi|297527419|ref|YP_003669443.1|	-	0.019	13.9	0.0	0.031	13.2	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF815)
NACHT	PF05729.7	gi|297527419|ref|YP_003669443.1|	-	0.023	14.3	0.0	0.042	13.5	0.0	1.4	1	0	0	1	1	1	0	NACHT	domain
AAA_25	PF13481.1	gi|297527419|ref|YP_003669443.1|	-	0.04	13.3	0.0	0.078	12.3	0.0	1.4	1	0	0	1	1	1	0	AAA	domain
AAA	PF00004.24	gi|297527419|ref|YP_003669443.1|	-	0.052	13.7	0.1	0.59	10.3	0.0	2.2	2	0	0	2	2	2	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
ResIII	PF04851.10	gi|297527419|ref|YP_003669443.1|	-	0.055	13.2	0.0	0.17	11.6	0.0	1.8	1	0	0	1	1	1	0	Type	III	restriction	enzyme,	res	subunit
ABC_tran	PF00005.22	gi|297527419|ref|YP_003669443.1|	-	0.061	13.6	0.0	0.11	12.7	0.0	1.4	1	0	0	1	1	1	0	ABC	transporter
AAA_28	PF13521.1	gi|297527419|ref|YP_003669443.1|	-	0.085	12.8	0.5	0.19	11.6	0.3	1.5	1	1	0	1	1	1	0	AAA	domain
Sigma54_activ_2	PF14532.1	gi|297527419|ref|YP_003669443.1|	-	0.095	12.7	0.0	0.96	9.4	0.0	2.3	2	1	1	3	3	2	0	Sigma-54	interaction	domain
Mg_chelatase	PF01078.16	gi|297527419|ref|YP_003669443.1|	-	0.17	11.0	0.0	0.29	10.2	0.0	1.3	1	0	0	1	1	1	0	Magnesium	chelatase,	subunit	ChlI
AAA_30	PF13604.1	gi|297527419|ref|YP_003669443.1|	-	0.32	10.5	0.0	2.9	7.4	0.0	2.0	2	0	0	2	2	2	0	AAA	domain
RNA_pol_Rpo13	PF12136.3	gi|297527420|ref|YP_003669444.1|	-	6.3e-14	51.4	4.7	7.1e-14	51.2	2.1	1.9	1	1	1	2	2	2	1	RNA	polymerase	Rpo13	subunit	HTH	domain
Gag_p17	PF00540.13	gi|297527420|ref|YP_003669444.1|	-	0.036	13.8	0.4	0.048	13.4	0.3	1.2	1	0	0	1	1	1	0	gag	gene	protein	p17	(matrix	protein)
RNase_H2-Ydr279	PF09468.5	gi|297527420|ref|YP_003669444.1|	-	1.6	7.8	9.6	1.6	7.8	6.7	1.1	1	0	0	1	1	1	0	Ydr279p	protein	family	(RNase	H2	complex	component)
RICTOR_M	PF14666.1	gi|297527421|ref|YP_003669445.1|	-	0.043	12.8	0.1	0.046	12.7	0.0	1.1	1	0	0	1	1	1	0	Rapamycin-insensitive	companion	of	mTOR,	middle	domain
PRK	PF00485.13	gi|297527421|ref|YP_003669445.1|	-	0.046	13.2	0.1	0.068	12.7	0.0	1.2	1	0	0	1	1	1	0	Phosphoribulokinase	/	Uridine	kinase	family
PCNA_N	PF00705.13	gi|297527422|ref|YP_003669446.1|	-	2.2e-11	43.3	0.0	4.1e-11	42.4	0.0	1.4	1	0	0	1	1	1	1	Proliferating	cell	nuclear	antigen,	N-terminal	domain
PCNA_C	PF02747.10	gi|297527422|ref|YP_003669446.1|	-	0.00058	19.7	0.1	0.063	13.1	0.0	2.8	3	0	0	3	3	3	1	Proliferating	cell	nuclear	antigen,	C-terminal	domain
DRTGG	PF07085.7	gi|297527422|ref|YP_003669446.1|	-	0.039	13.5	0.0	0.088	12.4	0.0	1.6	1	1	0	1	1	1	0	DRTGG	domain
HxlR	PF01638.12	gi|297527422|ref|YP_003669446.1|	-	0.13	11.8	0.0	0.35	10.5	0.0	1.7	2	0	0	2	2	2	0	HxlR-like	helix-turn-helix
Fer4	PF00037.22	gi|297527423|ref|YP_003669447.1|	-	1.1	8.9	0.1	1.1	8.9	0.1	3.1	4	0	0	4	4	4	0	4Fe-4S	binding	domain
POR	PF01558.13	gi|297527424|ref|YP_003669448.1|	-	4.5e-34	117.8	1.3	5.3e-34	117.5	0.9	1.0	1	0	0	1	1	1	1	Pyruvate	ferredoxin/flavodoxin	oxidoreductase
OMPdecase	PF00215.19	gi|297527424|ref|YP_003669448.1|	-	0.11	11.9	0.1	0.18	11.1	0.0	1.3	1	0	0	1	1	1	0	Orotidine	5'-phosphate	decarboxylase	/	HUMPS	family
OprF	PF05736.6	gi|297527424|ref|YP_003669448.1|	-	0.16	11.4	1.4	0.43	10.0	0.1	2.0	2	0	0	2	2	2	0	OprF	membrane	domain
Fer4	PF00037.22	gi|297527425|ref|YP_003669449.1|	-	3.6e-15	54.8	16.6	5.9e-10	38.3	4.3	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|297527425|ref|YP_003669449.1|	-	1e-11	44.1	15.9	3.7e-07	29.7	3.6	2.1	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_21	PF14697.1	gi|297527425|ref|YP_003669449.1|	-	1.3e-11	44.1	9.8	1.9e-11	43.6	6.8	1.3	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_7	PF12838.2	gi|297527425|ref|YP_003669449.1|	-	2.9e-11	43.5	12.2	4e-11	43.1	8.5	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|297527425|ref|YP_003669449.1|	-	4e-11	42.5	20.6	3.7e-08	33.0	7.6	1.7	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|297527425|ref|YP_003669449.1|	-	1.3e-09	38.1	13.3	1.7e-09	37.7	9.2	1.2	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|297527425|ref|YP_003669449.1|	-	4.3e-09	35.7	13.7	8.3e-05	22.2	2.6	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_16	PF13484.1	gi|297527425|ref|YP_003669449.1|	-	4.2e-08	33.8	8.6	0.00011	22.8	1.3	2.2	1	1	1	2	2	2	2	4Fe-4S	double	cluster	binding	domain
Fer4_17	PF13534.1	gi|297527425|ref|YP_003669449.1|	-	2.4e-06	27.8	4.7	0.02	15.2	0.0	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|297527425|ref|YP_003669449.1|	-	6.8e-06	26.0	10.7	0.00018	21.4	8.2	2.0	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|297527425|ref|YP_003669449.1|	-	7.2e-06	25.9	14.7	0.00052	20.1	2.8	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|297527425|ref|YP_003669449.1|	-	1.2e-05	25.5	9.0	0.024	15.0	0.2	2.1	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_3	PF12798.2	gi|297527425|ref|YP_003669449.1|	-	0.00012	22.3	19.2	0.0037	17.7	5.5	2.2	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_15	PF13459.1	gi|297527425|ref|YP_003669449.1|	-	0.0011	19.5	15.1	0.069	13.7	3.2	2.9	2	2	0	2	2	2	2	4Fe-4S	single	cluster	domain
Fer4_11	PF13247.1	gi|297527425|ref|YP_003669449.1|	-	0.0077	16.0	5.8	0.028	14.3	4.0	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_13	PF13370.1	gi|297527425|ref|YP_003669449.1|	-	0.063	13.6	12.9	1.1	9.6	2.1	2.6	2	2	0	2	2	2	0	4Fe-4S	single	cluster	domain
POR_N	PF01855.14	gi|297527426|ref|YP_003669450.1|	-	1.3e-67	227.7	0.2	1.6e-67	227.3	0.2	1.1	1	0	0	1	1	1	1	Pyruvate	flavodoxin/ferredoxin	oxidoreductase,	thiamine	diP-bdg
Transketolase_C	PF02780.15	gi|297527426|ref|YP_003669450.1|	-	0.0011	18.8	0.0	0.0024	17.8	0.0	1.5	1	0	0	1	1	1	1	Transketolase,	C-terminal	domain
TPP_enzyme_C	PF02775.16	gi|297527427|ref|YP_003669451.1|	-	1.3e-25	89.7	0.7	1.7e-25	89.3	0.5	1.2	1	0	0	1	1	1	1	Thiamine	pyrophosphate	enzyme,	C-terminal	TPP	binding	domain
DXP_synthase_N	PF13292.1	gi|297527427|ref|YP_003669451.1|	-	0.00023	20.1	0.2	0.00033	19.6	0.1	1.3	1	0	0	1	1	1	1	1-deoxy-D-xylulose-5-phosphate	synthase
Acetyltransf_7	PF13508.1	gi|297527428|ref|YP_003669452.1|	-	1.4e-21	76.4	0.4	1.5e-17	63.5	0.1	2.7	2	1	0	2	2	2	2	Acetyltransferase	(GNAT)	domain
Acetyltransf_1	PF00583.19	gi|297527428|ref|YP_003669452.1|	-	9.3e-19	67.2	0.1	2e-17	62.9	0.1	2.4	3	0	0	3	3	3	1	Acetyltransferase	(GNAT)	family
Acetyltransf_10	PF13673.1	gi|297527428|ref|YP_003669452.1|	-	4.7e-10	39.6	0.0	2.3e-08	34.1	0.0	2.3	2	1	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
Acetyltransf_8	PF13523.1	gi|297527428|ref|YP_003669452.1|	-	2.1e-08	34.1	0.0	0.00011	22.0	0.0	2.7	2	1	0	2	2	2	2	Acetyltransferase	(GNAT)	domain
Acetyltransf_9	PF13527.1	gi|297527428|ref|YP_003669452.1|	-	5e-08	32.8	0.0	2.1e-06	27.6	0.0	2.5	2	1	0	2	2	2	1	Acetyltransferase	(GNAT)	domain
FR47	PF08445.5	gi|297527428|ref|YP_003669452.1|	-	6e-06	25.9	0.0	1.2e-05	24.9	0.0	1.5	1	0	0	1	1	1	1	FR47-like	protein
Acetyltransf_CG	PF14542.1	gi|297527428|ref|YP_003669452.1|	-	0.0001	22.1	0.0	0.0002	21.1	0.0	1.5	1	0	0	1	1	1	1	GCN5-related	N-acetyl-transferase
Acetyltransf_4	PF13420.1	gi|297527428|ref|YP_003669452.1|	-	0.00032	20.6	0.3	0.13	12.2	0.0	2.5	2	1	0	2	2	2	2	Acetyltransferase	(GNAT)	domain
Acetyltransf_6	PF13480.1	gi|297527428|ref|YP_003669452.1|	-	0.0022	17.9	0.0	0.0033	17.3	0.0	1.3	1	0	0	1	1	1	1	Acetyltransferase	(GNAT)	domain
ROS_MUCR	PF05443.6	gi|297527428|ref|YP_003669452.1|	-	0.056	13.2	0.0	0.79	9.5	0.0	2.3	2	0	0	2	2	2	0	ROS/MUCR	transcriptional	regulator	protein
Sec61_beta	PF03911.11	gi|297527429|ref|YP_003669453.1|	-	1.8e-14	53.2	0.7	2.1e-14	53.0	0.5	1.1	1	0	0	1	1	1	1	Sec61beta	family
MazG	PF03819.12	gi|297527430|ref|YP_003669454.1|	-	1.3e-12	47.4	3.4	1.4e-12	47.3	1.6	1.6	1	1	1	2	2	2	1	MazG	nucleotide	pyrophosphohydrolase	domain
PRA-PH	PF01503.12	gi|297527430|ref|YP_003669454.1|	-	0.0001	22.5	0.5	0.00011	22.3	0.3	1.1	1	0	0	1	1	1	1	Phosphoribosyl-ATP	pyrophosphohydrolase
MazG-like	PF12643.2	gi|297527430|ref|YP_003669454.1|	-	0.0017	18.2	0.1	0.0021	17.9	0.0	1.1	1	0	0	1	1	1	1	MazG-like	family
HHH_7	PF14635.1	gi|297527430|ref|YP_003669454.1|	-	0.075	13.1	0.1	0.11	12.5	0.0	1.4	1	1	0	1	1	1	0	Helix-hairpin-helix	motif
DUF2709	PF10915.3	gi|297527430|ref|YP_003669454.1|	-	0.11	11.4	0.0	0.13	11.2	0.0	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2709)
PcrB	PF01884.12	gi|297527431|ref|YP_003669455.1|	-	8.1e-60	201.9	0.4	1e-59	201.6	0.3	1.0	1	0	0	1	1	1	1	PcrB	family
His_biosynth	PF00977.16	gi|297527431|ref|YP_003669455.1|	-	2.9e-05	23.4	0.0	5.4e-05	22.5	0.0	1.5	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
NanE	PF04131.9	gi|297527431|ref|YP_003669455.1|	-	0.0045	15.9	0.1	0.043	12.7	0.0	2.1	2	0	0	2	2	2	1	Putative	N-acetylmannosamine-6-phosphate	epimerase
Trp_syntA	PF00290.15	gi|297527431|ref|YP_003669455.1|	-	0.037	12.5	0.1	0.17	10.4	0.0	1.9	2	0	0	2	2	2	0	Tryptophan	synthase	alpha	chain
Elf1	PF05129.8	gi|297527432|ref|YP_003669456.1|	-	2.2e-22	78.5	0.3	3.1e-22	78.0	0.1	1.3	1	1	0	1	1	1	1	Transcription	elongation	factor	Elf1	like
Lar_restr_allev	PF14354.1	gi|297527432|ref|YP_003669456.1|	-	0.00041	20.5	0.2	0.00056	20.1	0.1	1.4	1	1	0	1	1	1	1	Restriction	alleviation	protein	Lar
zf-ZPR1	PF03367.8	gi|297527432|ref|YP_003669456.1|	-	0.0034	16.5	0.5	0.0052	15.9	0.3	1.4	1	1	0	1	1	1	1	ZPR1	zinc-finger	domain
TF_Zn_Ribbon	PF08271.7	gi|297527432|ref|YP_003669456.1|	-	0.0068	15.6	1.9	0.049	12.9	1.3	2.3	1	1	0	1	1	1	1	TFIIB	zinc-binding
Rubredoxin	PF00301.15	gi|297527432|ref|YP_003669456.1|	-	0.015	15.1	0.2	0.13	12.1	0.0	2.1	2	0	0	2	2	2	0	Rubredoxin
DUF164	PF02591.10	gi|297527432|ref|YP_003669456.1|	-	0.026	14.3	0.4	0.54	10.1	0.1	2.3	2	0	0	2	2	2	0	Putative	zinc	ribbon	domain
zf-H2C2_2	PF13465.1	gi|297527432|ref|YP_003669456.1|	-	0.038	14.2	1.2	0.13	12.6	0.1	2.1	2	0	0	2	2	2	0	Zinc-finger	double	domain
zf-ribbon_3	PF13248.1	gi|297527432|ref|YP_003669456.1|	-	0.043	13.0	2.4	0.087	12.0	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
T4_baseplate	PF12322.3	gi|297527432|ref|YP_003669456.1|	-	0.055	12.7	0.1	0.079	12.2	0.1	1.2	1	0	0	1	1	1	0	T4	bacteriophage	base	plate	protein
DNA_RNApol_7kD	PF03604.8	gi|297527432|ref|YP_003669456.1|	-	0.058	12.8	0.9	7.4	6.1	0.1	2.3	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
DUF1610	PF07754.6	gi|297527432|ref|YP_003669456.1|	-	0.06	13.4	0.5	0.06	13.4	0.3	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
zf-CSL	PF05207.8	gi|297527432|ref|YP_003669456.1|	-	0.067	12.7	0.4	0.24	10.9	0.3	1.9	1	1	1	2	2	2	0	CSL	zinc	finger
CpXC	PF14353.1	gi|297527432|ref|YP_003669456.1|	-	0.081	12.8	0.1	14	5.7	0.0	2.1	2	0	0	2	2	2	0	CpXC	protein
zinc_ribbon_5	PF13719.1	gi|297527432|ref|YP_003669456.1|	-	0.085	12.4	5.3	0.16	11.5	1.8	2.2	1	1	1	2	2	2	0	zinc-ribbon	domain
zinc_ribbon_4	PF13717.1	gi|297527432|ref|YP_003669456.1|	-	0.09	12.4	5.8	0.17	11.6	1.9	2.2	1	1	1	2	2	2	0	zinc-ribbon	domain
NOB1_Zn_bind	PF08772.6	gi|297527432|ref|YP_003669456.1|	-	0.11	12.3	0.6	0.55	10.0	0.0	2.2	3	0	0	3	3	3	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
DZR	PF12773.2	gi|297527432|ref|YP_003669456.1|	-	0.12	12.2	1.3	0.29	10.9	0.9	1.6	1	1	0	1	1	1	0	Double	zinc	ribbon
Nudix_N_2	PF14803.1	gi|297527432|ref|YP_003669456.1|	-	0.12	12.0	1.4	8.6	6.1	0.0	2.4	2	0	0	2	2	2	0	Nudix	N-terminal
DUF2296	PF10058.4	gi|297527432|ref|YP_003669456.1|	-	0.13	12.0	0.2	4.9	6.9	0.1	2.2	2	0	0	2	2	2	0	Predicted	integral	membrane	metal-binding	protein	(DUF2296)
Zn-ribbon_8	PF09723.5	gi|297527432|ref|YP_003669456.1|	-	0.21	11.5	1.6	1.3	9.0	0.1	2.2	1	1	1	2	2	2	0	Zinc	ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|297527432|ref|YP_003669456.1|	-	0.23	11.1	0.9	2.8	7.6	0.1	2.1	1	1	1	2	2	2	0	Putative	transposase	DNA-binding	domain
zf-ISL3	PF14690.1	gi|297527432|ref|YP_003669456.1|	-	0.57	10.2	0.0	0.57	10.2	0.0	2.4	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zinc_ribbon_2	PF13240.1	gi|297527432|ref|YP_003669456.1|	-	0.95	9.0	5.0	0.37	10.3	0.3	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-NADH-PPase	PF09297.6	gi|297527432|ref|YP_003669456.1|	-	3.3	7.2	5.7	1.7	8.2	0.2	2.2	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
Ribosomal_L44	PF00935.14	gi|297527432|ref|YP_003669456.1|	-	7	6.7	8.8	0.95	9.5	2.7	1.9	1	1	1	2	2	2	0	Ribosomal	protein	L44
SWIM	PF04434.12	gi|297527433|ref|YP_003669457.1|	-	0.024	14.0	0.5	0.039	13.4	0.3	1.4	1	0	0	1	1	1	0	SWIM	zinc	finger
TP6A_N	PF04406.9	gi|297527433|ref|YP_003669457.1|	-	0.026	14.1	0.9	1.2	8.8	0.1	2.3	2	0	0	2	2	2	0	Type	IIB	DNA	topoisomerase
XAP5	PF04921.9	gi|297527433|ref|YP_003669457.1|	-	0.033	13.7	0.6	0.039	13.5	0.4	1.1	1	0	0	1	1	1	0	XAP5,	circadian	clock	regulator
DUF3414	PF11894.3	gi|297527433|ref|YP_003669457.1|	-	0.15	8.9	0.1	0.16	8.8	0.1	1.1	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3414)
Rib_5-P_isom_A	PF06026.9	gi|297527434|ref|YP_003669458.1|	-	1.5e-43	148.0	0.0	1.8e-43	147.8	0.0	1.1	1	0	0	1	1	1	1	Ribose	5-phosphate	isomerase	A	(phosphoriboisomerase	A)
Sugar-bind	PF04198.8	gi|297527434|ref|YP_003669458.1|	-	0.0079	15.1	0.0	0.012	14.4	0.0	1.2	1	0	0	1	1	1	1	Putative	sugar-binding	domain
IF-2B	PF01008.12	gi|297527435|ref|YP_003669459.1|	-	6.4e-84	281.2	0.3	7.4e-84	281.0	0.2	1.0	1	0	0	1	1	1	1	Initiation	factor	2	subunit	family
Rep_fac_C	PF08542.6	gi|297527435|ref|YP_003669459.1|	-	0.0063	16.4	0.0	3.9	7.5	0.0	2.4	2	0	0	2	2	2	2	Replication	factor	C	C-terminal	domain
DHDPS	PF00701.17	gi|297527435|ref|YP_003669459.1|	-	0.025	13.1	0.0	0.04	12.5	0.0	1.3	1	0	0	1	1	1	0	Dihydrodipicolinate	synthetase	family
DUF996	PF06195.8	gi|297527436|ref|YP_003669460.1|	-	4.7e-24	84.9	30.3	4.7e-24	84.9	21.0	1.9	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF996)
DUF4013	PF13197.1	gi|297527436|ref|YP_003669460.1|	-	1.9	7.7	43.0	0.02	14.2	22.4	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF4013)
tRNA_int_endo	PF01974.12	gi|297527437|ref|YP_003669461.1|	-	5.3e-11	42.1	0.1	9.9e-11	41.2	0.0	1.5	1	0	0	1	1	1	1	tRNA	intron	endonuclease,	catalytic	C-terminal	domain
tRNA_int_endo_N	PF02778.9	gi|297527437|ref|YP_003669461.1|	-	4e-09	35.8	0.1	8.2e-09	34.8	0.1	1.5	1	0	0	1	1	1	1	tRNA	intron	endonuclease,	N-terminal	domain
tRNA-synt_His	PF13393.1	gi|297527438|ref|YP_003669462.1|	-	1.5e-58	198.3	0.0	1.8e-58	198.0	0.0	1.1	1	0	0	1	1	1	1	Histidyl-tRNA	synthetase
tRNA-synt_2b	PF00587.20	gi|297527438|ref|YP_003669462.1|	-	1.8e-22	79.7	1.0	3.2e-22	78.9	0.1	1.8	2	0	0	2	2	2	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
HGTP_anticodon	PF03129.15	gi|297527438|ref|YP_003669462.1|	-	2e-08	34.0	0.3	5.2e-08	32.7	0.1	1.8	2	0	0	2	2	2	1	Anticodon	binding	domain
tRNA-synt_2d	PF01409.15	gi|297527438|ref|YP_003669462.1|	-	5.1e-05	22.5	0.1	0.00078	18.7	0.0	2.5	3	0	0	3	3	3	1	tRNA	synthetases	class	II	core	domain	(F)
tRNA-synt_2	PF00152.15	gi|297527438|ref|YP_003669462.1|	-	0.04	12.6	4.8	0.13	11.0	0.3	2.8	3	1	0	3	3	3	0	tRNA	synthetases	class	II	(D,	K	and	N)
Ribosomal_L22	PF00237.14	gi|297527438|ref|YP_003669462.1|	-	0.052	13.4	0.3	0.3	11.0	0.0	2.2	2	0	0	2	2	2	0	Ribosomal	protein	L22p/L17e
Neurensin	PF14927.1	gi|297527438|ref|YP_003669462.1|	-	0.12	11.6	0.0	0.27	10.6	0.0	1.5	1	0	0	1	1	1	0	Neurensin
RtcB	PF01139.12	gi|297527439|ref|YP_003669463.1|	-	6.8e-152	506.3	0.0	7.7e-152	506.1	0.0	1.0	1	0	0	1	1	1	1	tRNA-splicing	ligase	RtcB
T2SF	PF00482.18	gi|297527440|ref|YP_003669464.1|	-	0.12	12.2	0.0	0.12	12.2	0.0	5.2	3	1	4	7	7	7	0	Type	II	secretion	system	(T2SS),	protein	F
T2SE	PF00437.15	gi|297527441|ref|YP_003669465.1|	-	6e-35	120.4	0.0	1e-34	119.7	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
AAA_28	PF13521.1	gi|297527441|ref|YP_003669465.1|	-	0.012	15.5	0.3	0.028	14.3	0.2	1.6	1	0	0	1	1	1	0	AAA	domain
AAA_29	PF13555.1	gi|297527441|ref|YP_003669465.1|	-	0.024	14.1	0.1	0.053	13.0	0.0	1.5	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
AAA_19	PF13245.1	gi|297527441|ref|YP_003669465.1|	-	0.15	11.8	0.3	0.59	9.9	0.1	2.0	2	0	0	2	2	2	0	Part	of	AAA	domain
rve_2	PF13333.1	gi|297527441|ref|YP_003669465.1|	-	0.32	11.0	2.3	0.78	9.8	1.6	1.6	1	0	0	1	1	1	0	Integrase	core	domain
DUF1923	PF09083.5	gi|297527442|ref|YP_003669466.1|	-	0.026	13.9	0.1	0.067	12.6	0.0	1.7	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1923)
DUF4041	PF13250.1	gi|297527442|ref|YP_003669466.1|	-	0.12	11.9	0.1	0.22	11.1	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4041)
DUF1628	PF07790.6	gi|297527442|ref|YP_003669466.1|	-	0.14	12.9	2.9	0.21	12.3	1.5	1.8	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1628)
Topo-VIb_trans	PF09239.6	gi|297527443|ref|YP_003669467.1|	-	4.6e-64	214.7	0.0	8.3e-64	213.9	0.0	1.4	1	0	0	1	1	1	1	Topoisomerase	VI	B	subunit,	transducer
HATPase_c	PF02518.21	gi|297527443|ref|YP_003669467.1|	-	1.5e-14	53.6	0.0	3.5e-14	52.4	0.0	1.6	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
HATPase_c_3	PF13589.1	gi|297527443|ref|YP_003669467.1|	-	1.4e-12	47.4	0.0	2.9e-12	46.4	0.0	1.5	1	0	0	1	1	1	1	Histidine	kinase-,	DNA	gyrase	B-,	and	HSP90-like	ATPase
FbpA	PF05833.6	gi|297527443|ref|YP_003669467.1|	-	0.00046	18.8	0.0	0.00046	18.8	0.0	1.8	2	0	0	2	2	2	1	Fibronectin-binding	protein	A	N-terminus	(FbpA)
Syntaxin	PF00804.20	gi|297527443|ref|YP_003669467.1|	-	0.13	12.4	0.8	15	5.8	0.4	2.4	2	0	0	2	2	2	0	Syntaxin
TP6A_N	PF04406.9	gi|297527444|ref|YP_003669468.1|	-	1.4e-25	88.7	0.2	3.4e-25	87.5	0.1	1.7	1	0	0	1	1	1	1	Type	IIB	DNA	topoisomerase
DUF2399	PF09664.5	gi|297527444|ref|YP_003669468.1|	-	0.0099	15.7	0.0	0.018	14.8	0.0	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	C-terminus	(DUF2399)
Vac_Fusion	PF02346.11	gi|297527444|ref|YP_003669468.1|	-	0.049	13.0	2.6	0.056	12.8	0.2	2.2	2	0	0	2	2	2	0	Chordopoxvirus	fusion	protein
ABC_tran	PF00005.22	gi|297527445|ref|YP_003669469.1|	-	9.3e-35	119.9	0.0	3.2e-34	118.1	0.0	1.8	2	0	0	2	2	2	1	ABC	transporter
AAA_21	PF13304.1	gi|297527445|ref|YP_003669469.1|	-	1.6e-10	41.4	0.1	0.0002	21.4	0.0	2.8	2	1	0	3	3	3	2	AAA	domain
TOBE_2	PF08402.5	gi|297527445|ref|YP_003669469.1|	-	1.4e-07	31.3	0.0	2.8e-07	30.4	0.0	1.5	1	0	0	1	1	1	1	TOBE	domain
SMC_N	PF02463.14	gi|297527445|ref|YP_003669469.1|	-	1.3e-05	24.5	0.1	0.00014	21.2	0.1	2.3	1	1	0	1	1	1	1	RecF/RecN/SMC	N	terminal	domain
TOBE	PF03459.12	gi|297527445|ref|YP_003669469.1|	-	2.7e-05	24.1	0.1	0.00015	21.7	0.0	2.3	3	0	0	3	3	2	1	TOBE	domain
AAA_19	PF13245.1	gi|297527445|ref|YP_003669469.1|	-	0.0022	17.7	0.1	0.009	15.7	0.0	2.1	2	0	0	2	2	2	1	Part	of	AAA	domain
AAA_16	PF13191.1	gi|297527445|ref|YP_003669469.1|	-	0.0023	17.9	0.0	0.0034	17.4	0.0	1.3	1	0	0	1	1	1	1	AAA	ATPase	domain
AAA_15	PF13175.1	gi|297527445|ref|YP_003669469.1|	-	0.0025	16.9	0.0	0.051	12.6	0.0	2.2	1	1	0	2	2	2	1	AAA	ATPase	domain
AAA_18	PF13238.1	gi|297527445|ref|YP_003669469.1|	-	0.005	17.1	0.1	0.017	15.4	0.0	2.0	2	1	0	2	2	2	1	AAA	domain
AAA_23	PF13476.1	gi|297527445|ref|YP_003669469.1|	-	0.0066	16.8	0.7	0.011	16.0	0.1	1.6	2	0	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|297527445|ref|YP_003669469.1|	-	0.0088	16.1	0.0	0.025	14.7	0.0	1.7	1	0	0	1	1	1	1	AAA	domain
AAA_29	PF13555.1	gi|297527445|ref|YP_003669469.1|	-	0.013	15.0	0.0	0.03	13.8	0.0	1.6	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
DUF258	PF03193.11	gi|297527445|ref|YP_003669469.1|	-	0.016	14.4	0.0	0.032	13.4	0.0	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function,	DUF258
T2SE	PF00437.15	gi|297527445|ref|YP_003669469.1|	-	0.044	12.6	0.2	0.15	10.9	0.0	1.9	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
AAA_10	PF12846.2	gi|297527445|ref|YP_003669469.1|	-	0.091	12.1	0.1	0.35	10.2	0.0	1.8	2	0	0	2	2	2	0	AAA-like	domain
AAA_30	PF13604.1	gi|297527445|ref|YP_003669469.1|	-	0.11	12.0	0.0	0.24	10.9	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Rad17	PF03215.10	gi|297527445|ref|YP_003669469.1|	-	0.11	11.1	0.0	0.16	10.5	0.0	1.2	1	0	0	1	1	1	0	Rad17	cell	cycle	checkpoint	protein
AAA_17	PF13207.1	gi|297527445|ref|YP_003669469.1|	-	0.14	13.0	2.3	0.46	11.3	0.3	2.4	2	1	0	2	2	2	0	AAA	domain
AAA_28	PF13521.1	gi|297527445|ref|YP_003669469.1|	-	0.14	12.1	0.1	0.44	10.4	0.0	1.8	2	0	0	2	2	2	0	AAA	domain
BPD_transp_1	PF00528.17	gi|297527446|ref|YP_003669470.1|	-	6.8e-20	71.3	24.3	6.8e-20	71.3	16.9	2.0	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
BPD_transp_1	PF00528.17	gi|297527447|ref|YP_003669471.1|	-	6.3e-15	55.1	23.9	6.3e-15	55.1	16.5	2.1	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
SBP_bac_1	PF01547.20	gi|297527448|ref|YP_003669472.1|	-	4.1e-34	118.7	7.6	5.6e-34	118.3	5.3	1.2	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_8	PF13416.1	gi|297527448|ref|YP_003669472.1|	-	8.4e-28	97.8	2.7	1.2e-27	97.3	1.9	1.2	1	0	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_11	PF13531.1	gi|297527448|ref|YP_003669472.1|	-	8.7e-07	28.7	0.1	3.3e-06	26.8	0.1	1.9	1	1	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
SBP_bac_6	PF13343.1	gi|297527448|ref|YP_003669472.1|	-	1.4e-05	24.5	1.1	0.0016	17.8	0.3	2.4	2	0	0	2	2	2	2	Bacterial	extracellular	solute-binding	protein
DUF2567	PF10821.3	gi|297527448|ref|YP_003669472.1|	-	0.043	13.3	0.5	0.098	12.1	0.4	1.6	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2567)
DUF3352	PF11832.3	gi|297527448|ref|YP_003669472.1|	-	0.1	10.8	2.0	0.18	10.0	1.0	1.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3352)
ASCH	PF04266.9	gi|297527449|ref|YP_003669473.1|	-	3.8e-16	59.3	0.3	5.8e-16	58.7	0.2	1.3	1	0	0	1	1	1	1	ASCH	domain
EntA_Immun	PF08951.5	gi|297527449|ref|YP_003669473.1|	-	0.039	14.0	0.3	0.99	9.6	0.0	2.4	2	0	0	2	2	2	0	Enterocin	A	Immunity
DUF4319	PF14203.1	gi|297527449|ref|YP_003669473.1|	-	0.071	12.6	0.1	0.26	10.8	0.0	1.9	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4319)
tRNA-Thr_ED	PF08915.6	gi|297527450|ref|YP_003669474.1|	-	2.3e-51	173.3	0.3	4.8e-51	172.3	0.0	1.7	2	0	0	2	2	2	1	Archaea-specific	editing	domain	of	threonyl-tRNA	synthetase
HGTP_anticodon	PF03129.15	gi|297527450|ref|YP_003669474.1|	-	2.2e-26	91.5	2.0	4.2e-26	90.7	1.4	1.5	1	0	0	1	1	1	1	Anticodon	binding	domain
tRNA-synt_2b	PF00587.20	gi|297527450|ref|YP_003669474.1|	-	4.6e-15	55.6	0.3	1e-14	54.5	0.2	1.5	1	0	0	1	1	1	1	tRNA	synthetase	class	II	core	domain	(G,	H,	P,	S	and	T)
Rad51	PF08423.6	gi|297527452|ref|YP_003669476.1|	-	5.9e-98	326.8	0.0	7.1e-98	326.5	0.0	1.1	1	0	0	1	1	1	1	Rad51
AAA_25	PF13481.1	gi|297527452|ref|YP_003669476.1|	-	5.1e-18	65.1	0.0	8.4e-18	64.4	0.0	1.3	1	0	0	1	1	1	1	AAA	domain
RecA	PF00154.16	gi|297527452|ref|YP_003669476.1|	-	8e-14	51.4	0.0	1.2e-13	50.8	0.0	1.1	1	0	0	1	1	1	1	recA	bacterial	DNA	recombination	protein
KaiC	PF06745.8	gi|297527452|ref|YP_003669476.1|	-	4.7e-12	45.5	0.0	7.2e-12	44.9	0.0	1.3	1	0	0	1	1	1	1	KaiC
HHH_5	PF14520.1	gi|297527452|ref|YP_003669476.1|	-	7.2e-08	32.4	0.1	2.1e-07	30.9	0.0	1.8	1	0	0	1	1	1	1	Helix-hairpin-helix	domain
AAA_22	PF13401.1	gi|297527452|ref|YP_003669476.1|	-	0.0015	18.6	0.0	0.0034	17.5	0.0	1.5	1	0	0	1	1	1	1	AAA	domain
IMS_HHH	PF11798.3	gi|297527452|ref|YP_003669476.1|	-	0.0017	18.2	0.0	0.0068	16.3	0.0	2.1	2	0	0	2	2	1	1	IMS	family	HHH	motif
AAA_24	PF13479.1	gi|297527452|ref|YP_003669476.1|	-	0.0018	17.9	0.0	0.0077	15.8	0.0	2.0	1	1	0	1	1	1	1	AAA	domain
Cdd1	PF11731.3	gi|297527452|ref|YP_003669476.1|	-	0.0019	18.0	0.0	0.0042	16.9	0.0	1.5	1	0	0	1	1	1	1	Pathogenicity	locus
AAA_18	PF13238.1	gi|297527452|ref|YP_003669476.1|	-	0.019	15.2	0.0	0.12	12.7	0.0	2.2	2	1	0	2	2	2	0	AAA	domain
AAA	PF00004.24	gi|297527452|ref|YP_003669476.1|	-	0.04	14.1	0.1	0.21	11.7	0.0	2.0	1	1	0	1	1	1	0	ATPase	family	associated	with	various	cellular	activities	(AAA)
HTH_31	PF13560.1	gi|297527452|ref|YP_003669476.1|	-	0.045	13.9	0.1	2.7	8.2	0.0	3.0	3	0	0	3	3	3	0	Helix-turn-helix	domain
HHH	PF00633.18	gi|297527452|ref|YP_003669476.1|	-	0.048	13.3	0.1	0.18	11.6	0.0	2.0	1	0	0	1	1	1	0	Helix-hairpin-helix	motif
Arc_PepC_II	PF06847.6	gi|297527453|ref|YP_003669477.1|	-	1.5e-21	76.6	0.1	1.5e-21	76.6	0.1	2.2	3	0	0	3	3	3	1	Archaeal	Peptidase	A24	C-terminus	Type	II
Peptidase_A24	PF01478.13	gi|297527453|ref|YP_003669477.1|	-	0.0007	19.7	15.9	0.0007	19.7	11.1	2.1	2	1	0	2	2	2	1	Type	IV	leader	peptidase	family
DUF4252	PF14060.1	gi|297527453|ref|YP_003669477.1|	-	0.052	13.0	0.1	0.095	12.2	0.1	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4252)
ACT_7	PF13840.1	gi|297527454|ref|YP_003669478.1|	-	0.033	13.7	0.0	0.085	12.3	0.0	1.6	2	0	0	2	2	2	0	ACT	domain
HIT	PF01230.18	gi|297527455|ref|YP_003669479.1|	-	1.8e-17	63.6	0.0	2.5e-17	63.2	0.0	1.2	1	0	0	1	1	1	1	HIT	domain
DcpS_C	PF11969.3	gi|297527455|ref|YP_003669479.1|	-	3.6e-11	43.3	0.0	4.7e-11	42.9	0.0	1.1	1	0	0	1	1	1	1	Scavenger	mRNA	decapping	enzyme	C-term	binding
CwfJ_C_1	PF04677.10	gi|297527455|ref|YP_003669479.1|	-	8.6e-09	35.0	0.0	1.5e-08	34.3	0.0	1.3	1	1	0	1	1	1	1	Protein	similar	to	CwfJ	C-terminus	1
zf-FCS	PF06467.9	gi|297527456|ref|YP_003669480.1|	-	0.015	14.9	0.1	0.02	14.4	0.1	1.3	1	0	0	1	1	1	0	MYM-type	Zinc	finger	with	FCS	sequence	motif
YHS	PF04945.8	gi|297527456|ref|YP_003669480.1|	-	0.05	13.4	0.0	0.088	12.6	0.0	1.4	1	0	0	1	1	1	0	YHS	domain
Ins_allergen_rp	PF06757.8	gi|297527456|ref|YP_003669480.1|	-	0.1	12.0	0.0	0.11	12.0	0.0	1.0	1	0	0	1	1	1	0	Insect	allergen	related	repeat,	nitrile-specifier	detoxification
Desulfoferrod_N	PF06397.7	gi|297527456|ref|YP_003669480.1|	-	0.11	11.9	0.5	0.16	11.3	0.4	1.4	1	0	0	1	1	1	0	Desulfoferrodoxin,	N-terminal	domain
Rad50_zn_hook	PF04423.9	gi|297527456|ref|YP_003669480.1|	-	0.22	11.0	1.7	3.5	7.1	0.1	2.3	2	0	0	2	2	2	0	Rad50	zinc	hook	motif
DUF2208	PF09973.4	gi|297527457|ref|YP_003669481.1|	-	5.5e-65	218.8	16.9	6.3e-65	218.6	11.7	1.0	1	0	0	1	1	1	1	Predicted	membrane	protein	(DUF2208)
DUF4010	PF13194.1	gi|297527459|ref|YP_003669483.1|	-	2.8e-32	111.7	20.2	2.8e-32	111.7	14.0	2.3	2	0	0	2	2	2	2	Domain	of	unknown	function	(DUF4010)
MgtC	PF02308.11	gi|297527459|ref|YP_003669483.1|	-	2.9e-10	40.0	7.9	2.9e-10	40.0	5.5	2.8	2	2	0	2	2	2	1	MgtC	family
Alba	PF01918.16	gi|297527460|ref|YP_003669484.1|	-	4.5e-08	32.5	0.0	6.2e-08	32.1	0.0	1.2	1	0	0	1	1	1	1	Alba
Topoisom_bac	PF01131.15	gi|297527461|ref|YP_003669485.1|	-	6.8e-86	288.6	0.0	1.2e-85	287.8	0.0	1.4	1	0	0	1	1	1	1	DNA	topoisomerase
DEAD	PF00270.24	gi|297527461|ref|YP_003669485.1|	-	1.4e-19	70.2	0.1	8e-19	67.7	0.1	2.3	1	1	0	1	1	1	1	DEAD/DEAH	box	helicase
Toprim	PF01751.17	gi|297527461|ref|YP_003669485.1|	-	3.4e-19	68.6	0.0	1.4e-18	66.6	0.0	2.2	1	0	0	1	1	1	1	Toprim	domain
ResIII	PF04851.10	gi|297527461|ref|YP_003669485.1|	-	1.3e-08	34.8	0.0	5.7e-08	32.8	0.0	2.0	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
AAA_19	PF13245.1	gi|297527461|ref|YP_003669485.1|	-	1.1e-06	28.3	0.3	5.4e-06	26.0	0.0	2.3	3	0	0	3	3	3	1	Part	of	AAA	domain
Helicase_C	PF00271.26	gi|297527461|ref|YP_003669485.1|	-	1.5e-05	24.7	0.0	0.031	14.1	0.0	3.5	3	0	0	3	3	3	1	Helicase	conserved	C-terminal	domain
AAA_25	PF13481.1	gi|297527461|ref|YP_003669485.1|	-	6.1e-05	22.5	0.0	0.0003	20.2	0.0	2.1	2	0	0	2	2	2	1	AAA	domain
AAA_22	PF13401.1	gi|297527461|ref|YP_003669485.1|	-	0.00025	21.1	0.0	0.0009	19.3	0.0	2.0	1	0	0	1	1	1	1	AAA	domain
AAA_30	PF13604.1	gi|297527461|ref|YP_003669485.1|	-	0.00047	19.7	0.0	0.0011	18.5	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_10	PF12846.2	gi|297527461|ref|YP_003669485.1|	-	0.0071	15.8	0.1	0.24	10.7	0.0	3.2	2	1	0	2	2	2	1	AAA-like	domain
Toprim_4	PF13662.1	gi|297527461|ref|YP_003669485.1|	-	0.0073	16.2	0.0	0.03	14.3	0.0	2.0	2	0	0	2	2	2	1	Toprim	domain
AAA_23	PF13476.1	gi|297527461|ref|YP_003669485.1|	-	0.026	14.8	8.3	0.12	12.7	4.5	2.8	2	1	0	2	2	2	0	AAA	domain
UPF0547	PF10571.4	gi|297527461|ref|YP_003669485.1|	-	0.038	13.6	0.1	0.038	13.6	0.1	3.0	3	0	0	3	3	3	0	Uncharacterised	protein	family	UPF0547
IstB_IS21	PF01695.12	gi|297527461|ref|YP_003669485.1|	-	0.048	13.0	0.0	0.11	11.8	0.0	1.6	1	0	0	1	1	1	0	IstB-like	ATP	binding	protein
OrfB_Zn_ribbon	PF07282.6	gi|297527461|ref|YP_003669485.1|	-	0.063	12.9	2.1	1.1	9.0	0.2	3.1	3	0	0	3	3	3	0	Putative	transposase	DNA-binding	domain
Ribosomal_S27	PF01599.14	gi|297527461|ref|YP_003669485.1|	-	0.34	10.7	3.4	0.37	10.6	0.2	2.5	2	0	0	2	2	2	0	Ribosomal	protein	S27a
DUF3896	PF13035.1	gi|297527461|ref|YP_003669485.1|	-	0.74	9.9	6.7	4.5	7.4	0.6	3.9	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF3896)
Prok-RING_1	PF14446.1	gi|297527461|ref|YP_003669485.1|	-	1.6	8.4	4.4	3.3	7.5	0.3	2.6	2	0	0	2	2	2	0	Prokaryotic	RING	finger	family	1
Alba	PF01918.16	gi|297527462|ref|YP_003669486.1|	-	9.2e-19	66.8	0.8	1.2e-18	66.4	0.6	1.2	1	0	0	1	1	1	1	Alba
Rpp20	PF12328.3	gi|297527462|ref|YP_003669486.1|	-	0.063	12.9	0.3	0.092	12.4	0.2	1.3	1	1	0	1	1	1	0	Rpp20	subunit	of	nuclear	RNase	MRP	and	P
TrmB	PF01978.14	gi|297527463|ref|YP_003669487.1|	-	0.054	13.2	0.1	0.11	12.1	0.1	1.7	1	1	0	1	1	1	0	Sugar-specific	transcriptional	regulator	TrmB
DUF460	PF04312.8	gi|297527464|ref|YP_003669488.1|	-	0.065	12.7	0.0	0.082	12.4	0.0	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF460)
ResIII	PF04851.10	gi|297527466|ref|YP_003669490.1|	-	5.9e-20	71.8	0.0	5.1e-19	68.8	0.0	2.3	1	1	0	1	1	1	1	Type	III	restriction	enzyme,	res	subunit
Helicase_C	PF00271.26	gi|297527466|ref|YP_003669490.1|	-	4.5e-17	61.6	0.0	1.1e-16	60.3	0.0	1.7	1	0	0	1	1	1	1	Helicase	conserved	C-terminal	domain
DEAD	PF00270.24	gi|297527466|ref|YP_003669490.1|	-	4.1e-11	42.6	0.0	2.6e-09	36.8	0.0	2.3	2	0	0	2	2	2	1	DEAD/DEAH	box	helicase
SNF2_N	PF00176.18	gi|297527466|ref|YP_003669490.1|	-	1.8e-06	26.9	0.0	5.7e-06	25.3	0.0	1.7	1	1	1	2	2	2	1	SNF2	family	N-terminal	domain
AAA_22	PF13401.1	gi|297527466|ref|YP_003669490.1|	-	0.065	13.3	1.2	2.7	8.1	0.1	3.7	4	1	0	4	4	4	0	AAA	domain
Pribosyltran	PF00156.22	gi|297527468|ref|YP_003669492.1|	-	2.5e-13	49.8	2.6	4.5e-13	49.0	1.2	1.8	2	0	0	2	2	2	1	Phosphoribosyl	transferase	domain
UPRTase	PF14681.1	gi|297527468|ref|YP_003669492.1|	-	0.0024	17.1	0.0	0.004	16.3	0.0	1.3	1	0	0	1	1	1	1	Uracil	phosphoribosyltransferase
DUF1641	PF07849.6	gi|297527468|ref|YP_003669492.1|	-	0.097	12.3	0.0	0.16	11.6	0.0	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF1641)
Pox_A_type_inc	PF04508.7	gi|297527468|ref|YP_003669492.1|	-	0.33	10.8	4.0	11	6.1	0.2	3.4	3	0	0	3	3	3	0	Viral	A-type	inclusion	protein	repeat
ACT	PF01842.20	gi|297527469|ref|YP_003669493.1|	-	3.8e-09	35.8	0.2	1.1e-08	34.4	0.1	1.8	1	1	0	1	1	1	1	ACT	domain
Antitoxin-MazE	PF04014.13	gi|297527469|ref|YP_003669493.1|	-	1.1e-05	25.0	1.2	2.3e-05	23.9	0.8	1.6	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
ACT_4	PF13291.1	gi|297527469|ref|YP_003669493.1|	-	5.5e-05	23.4	0.0	0.00011	22.4	0.0	1.5	1	0	0	1	1	1	1	ACT	domain
MraZ	PF02381.13	gi|297527469|ref|YP_003669493.1|	-	0.0012	18.5	0.1	0.0022	17.7	0.1	1.4	1	0	0	1	1	1	1	MraZ	protein
ACT_6	PF13740.1	gi|297527469|ref|YP_003669493.1|	-	0.019	14.6	0.1	0.052	13.2	0.0	1.8	1	1	1	2	2	2	0	ACT	domain
ACT_7	PF13840.1	gi|297527469|ref|YP_003669493.1|	-	0.042	13.3	0.0	0.082	12.4	0.0	1.5	1	0	0	1	1	1	0	ACT	domain
DUF4089	PF13318.1	gi|297527469|ref|YP_003669493.1|	-	0.079	13.2	0.4	0.21	11.9	0.1	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF4089)
DUF72	PF01904.13	gi|297527470|ref|YP_003669494.1|	-	2.2e-36	125.7	0.0	2.5e-36	125.5	0.0	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	DUF72
AP_endonuc_2	PF01261.19	gi|297527470|ref|YP_003669494.1|	-	2.7e-05	23.5	0.0	0.00042	19.6	0.0	2.3	1	1	2	3	3	3	1	Xylose	isomerase-like	TIM	barrel
SLAC1	PF03595.12	gi|297527471|ref|YP_003669495.1|	-	0.25	9.9	5.6	0.024	13.2	0.7	1.5	2	0	0	2	2	2	0	Voltage-dependent	anion	channel
DUF872	PF05915.7	gi|297527471|ref|YP_003669495.1|	-	0.43	10.4	3.6	0.14	12.0	0.4	1.7	2	0	0	2	2	2	0	Eukaryotic	protein	of	unknown	function	(DUF872)
TraD_N	PF12615.3	gi|297527471|ref|YP_003669495.1|	-	1.9	8.9	7.7	1.9	8.8	1.8	2.8	2	1	1	3	3	3	0	F	sex	factor	protein	N	terminal
HTH_28	PF13518.1	gi|297527473|ref|YP_003669497.1|	-	3.2e-10	39.8	0.6	0.00022	21.1	0.1	2.3	2	0	0	2	2	2	2	Helix-turn-helix	domain
HTH_23	PF13384.1	gi|297527473|ref|YP_003669497.1|	-	8.4e-09	34.8	1.0	5.7e-06	25.8	0.2	2.3	2	0	0	2	2	2	2	Homeodomain-like	domain
HTH_38	PF13936.1	gi|297527473|ref|YP_003669497.1|	-	1.1e-06	28.1	1.8	8.5e-06	25.2	0.4	2.3	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_7	PF02796.10	gi|297527473|ref|YP_003669497.1|	-	4.9e-05	23.1	7.7	0.003	17.3	1.7	2.3	2	0	0	2	2	2	2	Helix-turn-helix	domain	of	resolvase
TrmB	PF01978.14	gi|297527473|ref|YP_003669497.1|	-	0.0018	17.9	1.2	0.01	15.5	0.0	2.3	2	1	0	2	2	2	1	Sugar-specific	transcriptional	regulator	TrmB
HTH_40	PF14493.1	gi|297527473|ref|YP_003669497.1|	-	0.0026	17.9	0.4	0.092	12.9	0.0	2.5	1	1	2	3	3	3	1	Helix-turn-helix	domain
HTH_IclR	PF09339.5	gi|297527473|ref|YP_003669497.1|	-	0.0059	16.1	0.0	0.021	14.3	0.0	1.8	2	0	0	2	2	2	1	IclR	helix-turn-helix	domain
HTH_psq	PF05225.11	gi|297527473|ref|YP_003669497.1|	-	0.0072	15.8	0.8	0.13	11.8	0.1	2.7	3	0	0	3	3	3	1	helix-turn-helix,	Psq	domain
HTH_29	PF13551.1	gi|297527473|ref|YP_003669497.1|	-	0.013	15.6	0.1	1	9.5	0.0	2.1	2	0	0	2	2	2	0	Winged	helix-turn	helix
Ribosomal_L31e	PF01198.14	gi|297527473|ref|YP_003669497.1|	-	0.014	15.0	2.0	0.025	14.2	1.4	1.4	1	0	0	1	1	1	0	Ribosomal	protein	L31e
Terminase_5	PF06056.7	gi|297527473|ref|YP_003669497.1|	-	0.014	14.9	0.3	0.038	13.5	0.1	1.8	2	0	0	2	2	2	0	Putative	ATPase	subunit	of	terminase	(gpP-like)
HTH_10	PF04967.7	gi|297527473|ref|YP_003669497.1|	-	0.016	14.7	0.1	0.059	12.9	0.0	2.0	2	0	0	2	2	1	0	HTH	DNA	binding	domain
CENP-B_N	PF04218.8	gi|297527473|ref|YP_003669497.1|	-	0.019	14.3	4.2	0.06	12.7	0.1	2.9	3	2	1	4	4	4	0	CENP-B	N-terminal	DNA-binding	domain
IF2_N	PF04760.10	gi|297527473|ref|YP_003669497.1|	-	0.026	14.1	1.5	0.34	10.5	0.0	2.9	2	1	1	3	3	3	0	Translation	initiation	factor	IF-2,	N-terminal	region
PfUIS3	PF11567.3	gi|297527473|ref|YP_003669497.1|	-	0.033	14.3	1.3	0.057	13.5	0.2	1.8	1	1	0	1	1	1	0	Plasmodium	falciparum	UIS3	membrane	protein
NatB_MDM20	PF09797.4	gi|297527473|ref|YP_003669497.1|	-	0.038	12.7	0.4	0.047	12.3	0.3	1.1	1	0	0	1	1	1	0	N-acetyltransferase	B	complex	(NatB)	non	catalytic	subunit
Recombinase	PF07508.8	gi|297527473|ref|YP_003669497.1|	-	0.039	14.1	0.8	1.2	9.3	0.1	2.4	2	0	0	2	2	2	0	Recombinase
HTH_19	PF12844.2	gi|297527473|ref|YP_003669497.1|	-	0.053	13.5	1.7	0.94	9.5	0.2	2.5	2	1	0	2	2	2	0	Helix-turn-helix	domain
HTH_26	PF13443.1	gi|297527473|ref|YP_003669497.1|	-	0.06	13.5	1.2	0.12	12.6	0.1	2.0	3	0	0	3	3	3	0	Cro/C1-type	HTH	DNA-binding	domain
HTH_17	PF12728.2	gi|297527473|ref|YP_003669497.1|	-	0.18	12.0	3.3	1.3	9.3	0.1	2.8	2	1	1	3	3	3	0	Helix-turn-helix	domain
GCR1_C	PF12550.3	gi|297527473|ref|YP_003669497.1|	-	0.38	10.6	5.8	0.81	9.6	4.0	1.6	1	1	0	1	1	1	0	Transcriptional	activator	of	glycolytic	enzymes
HTH_22	PF13309.1	gi|297527473|ref|YP_003669497.1|	-	4.7	7.0	8.0	13	5.5	2.8	3.0	1	1	2	3	3	3	0	HTH	domain
DUF367	PF04034.8	gi|297527474|ref|YP_003669498.1|	-	7.9e-36	122.4	0.0	9.5e-36	122.2	0.0	1.1	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF367)
RLI	PF04068.10	gi|297527474|ref|YP_003669498.1|	-	0.089	12.3	0.0	0.15	11.6	0.0	1.3	1	0	0	1	1	1	0	Possible	Fer4-like	domain	in	RNase	L	inhibitor,	RLI
AsnC_trans_reg	PF01037.16	gi|297527475|ref|YP_003669499.1|	-	1.8e-15	56.3	1.7	2.1e-15	56.1	1.2	1.0	1	0	0	1	1	1	1	AsnC	family
MS_channel	PF00924.13	gi|297527476|ref|YP_003669500.1|	-	3.8e-59	199.4	1.2	5.3e-59	199.0	0.8	1.2	1	0	0	1	1	1	1	Mechanosensitive	ion	channel
DUF432	PF04254.8	gi|297527477|ref|YP_003669501.1|	-	2.6e-29	101.6	0.7	3.9e-29	101.0	0.5	1.3	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF432)
Glyco_trans_1_4	PF13692.1	gi|297527478|ref|YP_003669502.1|	-	0.00012	22.2	0.0	0.00017	21.7	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Epimerase_2	PF02350.14	gi|297527478|ref|YP_003669502.1|	-	0.068	11.9	0.0	0.12	11.1	0.0	1.4	1	0	0	1	1	1	0	UDP-N-acetylglucosamine	2-epimerase
Glycos_transf_1	PF00534.15	gi|297527478|ref|YP_003669502.1|	-	0.07	12.5	0.0	0.15	11.4	0.0	1.6	1	1	0	1	1	1	0	Glycosyl	transferases	group	1
Glyco_trans_4_2	PF13477.1	gi|297527478|ref|YP_003669502.1|	-	0.088	12.6	0.9	0.25	11.1	0.6	1.7	1	0	0	1	1	1	0	Glycosyl	transferase	4-like
Glycos_transf_1	PF00534.15	gi|297527479|ref|YP_003669503.1|	-	6.3e-19	68.0	0.0	1.1e-18	67.2	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_trans_1_4	PF13692.1	gi|297527479|ref|YP_003669503.1|	-	6.2e-09	36.1	0.0	1.3e-08	35.0	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Glyco_transf_4	PF13439.1	gi|297527479|ref|YP_003669503.1|	-	0.0039	16.9	0.1	0.016	14.9	0.1	2.0	1	1	0	1	1	1	1	Glycosyltransferase	Family	4
Glyco_trans_1_2	PF13524.1	gi|297527479|ref|YP_003669503.1|	-	0.0049	17.1	0.0	0.011	16.0	0.0	1.5	1	0	0	1	1	1	1	Glycosyl	transferases	group	1
Phosphodiest	PF01663.17	gi|297527480|ref|YP_003669504.1|	-	6.4e-21	75.0	0.0	1.3e-20	74.0	0.0	1.7	1	1	0	1	1	1	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
PglZ	PF08665.7	gi|297527480|ref|YP_003669504.1|	-	0.0033	17.1	0.1	0.008	15.8	0.0	1.7	1	1	0	1	1	1	1	PglZ	domain
Sulfatase	PF00884.18	gi|297527480|ref|YP_003669504.1|	-	0.0063	15.7	0.0	0.018	14.2	0.0	1.6	2	0	0	2	2	2	1	Sulfatase
DUF1829	PF08862.5	gi|297527480|ref|YP_003669504.1|	-	0.079	13.2	0.0	0.17	12.1	0.0	1.5	1	0	0	1	1	1	0	Domain	of	unknown	function	DUF1829
Metalloenzyme	PF01676.13	gi|297527480|ref|YP_003669504.1|	-	0.095	12.0	0.0	0.16	11.2	0.0	1.3	1	0	0	1	1	1	0	Metalloenzyme	superfamily
Glycos_transf_2	PF00535.21	gi|297527481|ref|YP_003669505.1|	-	7e-13	48.5	0.1	1.2e-12	47.8	0.1	1.4	1	0	0	1	1	1	1	Glycosyl	transferase	family	2
Phosphodiest	PF01663.17	gi|297527482|ref|YP_003669506.1|	-	2.3e-21	76.5	0.0	4.1e-21	75.7	0.0	1.3	1	0	0	1	1	1	1	Type	I	phosphodiesterase	/	nucleotide	pyrophosphatase
PglZ	PF08665.7	gi|297527482|ref|YP_003669506.1|	-	0.0087	15.7	0.0	0.016	14.9	0.0	1.4	1	0	0	1	1	1	1	PglZ	domain
Polysacc_synt_3	PF13440.1	gi|297527483|ref|YP_003669507.1|	-	5.2e-09	35.9	35.3	5.2e-09	35.9	24.4	3.4	2	1	0	3	3	3	1	Polysaccharide	biosynthesis	protein
Ribosomal_L37e	PF01907.14	gi|297527484|ref|YP_003669508.1|	-	4.4e-23	80.8	13.8	5e-23	80.6	9.6	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L37e
DZR	PF12773.2	gi|297527484|ref|YP_003669508.1|	-	0.018	14.8	0.6	0.022	14.5	0.4	1.2	1	0	0	1	1	1	0	Double	zinc	ribbon
Stc1	PF12898.2	gi|297527484|ref|YP_003669508.1|	-	0.027	14.5	0.5	0.03	14.3	0.3	1.1	1	0	0	1	1	1	0	Stc1	domain
NOB1_Zn_bind	PF08772.6	gi|297527484|ref|YP_003669508.1|	-	0.069	12.9	0.9	0.089	12.6	0.6	1.3	1	0	0	1	1	1	0	Nin	one	binding	(NOB1)	Zn-ribbon	like
DNA_RNApol_7kD	PF03604.8	gi|297527484|ref|YP_003669508.1|	-	1.6	8.3	6.9	0.48	9.9	0.7	2.2	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
LSM	PF01423.17	gi|297527485|ref|YP_003669509.1|	-	4.5e-22	77.3	0.6	5e-22	77.2	0.4	1.0	1	0	0	1	1	1	1	LSM	domain
PUA	PF01472.15	gi|297527486|ref|YP_003669510.1|	-	1.6e-16	59.7	2.0	1.6e-16	59.7	1.4	1.8	2	0	0	2	2	2	1	PUA	domain
DUF1947	PF09183.5	gi|297527486|ref|YP_003669510.1|	-	2.7e-05	23.8	0.1	4.6e-05	23.0	0.1	1.4	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1947)
DUF2659	PF10858.3	gi|297527487|ref|YP_003669511.1|	-	3.7e-06	26.5	0.2	4.1e-06	26.3	0.1	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF2659)
MIT	PF04212.13	gi|297527487|ref|YP_003669511.1|	-	0.033	14.0	0.0	0.055	13.3	0.0	1.4	1	0	0	1	1	1	0	MIT	(microtubule	interacting	and	transport)	domain
MacB_PCD	PF12704.2	gi|297527487|ref|YP_003669511.1|	-	0.12	11.9	0.3	0.12	11.9	0.2	1.2	1	0	0	1	1	1	0	MacB-like	periplasmic	core	domain
DUF4430	PF14478.1	gi|297527487|ref|YP_003669511.1|	-	0.44	10.6	1.7	4.3	7.4	0.0	2.1	1	1	1	2	2	2	0	Domain	of	unknown	function	(DUF4430)
FKBP_C	PF00254.23	gi|297527488|ref|YP_003669512.1|	-	4.2e-13	49.1	0.4	1.9e-12	47.0	0.0	2.2	2	2	0	2	2	2	1	FKBP-type	peptidyl-prolyl	cis-trans	isomerase
RteC	PF09357.5	gi|297527488|ref|YP_003669512.1|	-	0.033	14.0	0.7	0.055	13.3	0.5	1.4	1	0	0	1	1	1	0	RteC	protein
DUF16	PF01519.11	gi|297527488|ref|YP_003669512.1|	-	0.085	13.0	7.3	0.1	12.8	4.0	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	DUF16
DUF2187	PF09953.4	gi|297527488|ref|YP_003669512.1|	-	0.095	12.4	4.2	0.15	11.8	1.6	2.3	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2187)
MS_channel	PF00924.13	gi|297527488|ref|YP_003669512.1|	-	0.27	10.5	1.7	0.7	9.1	0.7	2.0	2	0	0	2	2	2	0	Mechanosensitive	ion	channel
eIF-1a	PF01176.14	gi|297527488|ref|YP_003669512.1|	-	0.3	10.5	5.3	4.3	6.8	0.0	3.2	4	0	0	4	4	4	0	Translation	initiation	factor	1A	/	IF-1
Fe-ADH_2	PF13685.1	gi|297527489|ref|YP_003669513.1|	-	3.1e-73	246.1	0.1	3.7e-73	245.8	0.1	1.1	1	0	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
Fe-ADH	PF00465.14	gi|297527489|ref|YP_003669513.1|	-	5.2e-26	91.1	0.7	1.6e-25	89.5	0.5	1.6	1	1	0	1	1	1	1	Iron-containing	alcohol	dehydrogenase
DHQ_synthase	PF01761.15	gi|297527489|ref|YP_003669513.1|	-	1.7e-09	37.0	0.0	1.1e-06	27.7	0.0	2.9	2	1	0	2	2	2	2	3-dehydroquinate	synthase
Proteasome	PF00227.21	gi|297527490|ref|YP_003669514.1|	-	2.3e-55	186.8	0.2	2.7e-55	186.5	0.2	1.0	1	0	0	1	1	1	1	Proteasome	subunit
RimK	PF08443.6	gi|297527490|ref|YP_003669514.1|	-	0.063	12.7	0.1	0.16	11.4	0.1	1.6	2	0	0	2	2	2	0	RimK-like	ATP-grasp	domain
Beta-Casp	PF10996.3	gi|297527491|ref|YP_003669515.1|	-	1.5e-31	108.9	0.0	4e-31	107.5	0.0	1.8	2	0	0	2	2	2	1	Beta-Casp	domain
Lactamase_B	PF00753.22	gi|297527491|ref|YP_003669515.1|	-	2.8e-20	72.7	0.5	5.6e-20	71.8	0.3	1.5	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
RMMBL	PF07521.7	gi|297527491|ref|YP_003669515.1|	-	3.3e-15	55.6	0.3	2.7e-14	52.6	0.0	2.5	2	0	0	2	2	2	1	RNA-metabolising	metallo-beta-lactamase
Lactamase_B_2	PF12706.2	gi|297527491|ref|YP_003669515.1|	-	1.4e-11	44.3	0.0	2.5e-10	40.2	0.0	2.2	2	0	0	2	2	2	1	Beta-lactamase	superfamily	domain
Lactamase_B_3	PF13483.1	gi|297527491|ref|YP_003669515.1|	-	0.0083	15.8	0.0	0.022	14.4	0.0	1.7	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
DUF2220	PF09983.4	gi|297527491|ref|YP_003669515.1|	-	0.016	14.3	0.0	0.03	13.4	0.0	1.3	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	C-term(DUF2220)
CTP_transf_2	PF01467.21	gi|297527492|ref|YP_003669516.1|	-	6.6e-15	55.5	0.0	8e-15	55.2	0.0	1.2	1	0	0	1	1	1	1	Cytidylyltransferase
RTC	PF01137.16	gi|297527493|ref|YP_003669517.1|	-	3.3e-78	261.6	0.0	4e-78	261.3	0.0	1.0	1	0	0	1	1	1	1	RNA	3'-terminal	phosphate	cyclase
RTC_insert	PF05189.8	gi|297527493|ref|YP_003669517.1|	-	5.8e-28	96.9	0.3	1e-27	96.1	0.2	1.4	1	0	0	1	1	1	1	RNA	3'-terminal	phosphate	cyclase	(RTC),	insert	domain
MMR_HSR1	PF01926.18	gi|297527494|ref|YP_003669518.1|	-	3e-18	65.8	0.0	7.9e-18	64.5	0.0	1.7	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
NOG1	PF06858.9	gi|297527494|ref|YP_003669518.1|	-	9.7e-17	60.6	0.4	2.2e-16	59.4	0.3	1.7	1	0	0	1	1	1	1	Nucleolar	GTP-binding	protein	1	(NOG1)
FeoB_N	PF02421.13	gi|297527494|ref|YP_003669518.1|	-	7.8e-11	41.4	0.0	1.3e-10	40.8	0.0	1.3	1	0	0	1	1	1	1	Ferrous	iron	transport	protein	B
SRPRB	PF09439.5	gi|297527494|ref|YP_003669518.1|	-	0.00014	21.1	0.1	0.00034	19.8	0.1	1.6	1	1	0	1	1	1	1	Signal	recognition	particle	receptor	beta	subunit
GTP_EFTU	PF00009.22	gi|297527494|ref|YP_003669518.1|	-	0.00015	21.2	1.9	0.042	13.2	1.3	3.0	1	1	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
Miro	PF08477.8	gi|297527494|ref|YP_003669518.1|	-	0.001	19.5	0.0	0.0022	18.4	0.0	1.6	1	0	0	1	1	1	1	Miro-like	protein
Ras	PF00071.17	gi|297527494|ref|YP_003669518.1|	-	0.0012	18.2	0.1	0.11	11.9	0.0	2.4	2	0	0	2	2	2	1	Ras	family
Dynamin_N	PF00350.18	gi|297527494|ref|YP_003669518.1|	-	0.0019	18.0	0.4	0.53	10.0	0.1	2.5	1	1	1	2	2	2	1	Dynamin	family
AAA_14	PF13173.1	gi|297527494|ref|YP_003669518.1|	-	0.0019	18.1	0.3	0.0062	16.4	0.0	2.0	2	0	0	2	2	2	1	AAA	domain
AAA_17	PF13207.1	gi|297527494|ref|YP_003669518.1|	-	0.0044	17.8	0.1	0.015	16.0	0.1	2.1	1	1	0	1	1	1	1	AAA	domain
DUF258	PF03193.11	gi|297527494|ref|YP_003669518.1|	-	0.014	14.5	0.8	0.13	11.4	0.1	2.7	2	1	0	2	2	2	0	Protein	of	unknown	function,	DUF258
AAA_18	PF13238.1	gi|297527494|ref|YP_003669518.1|	-	0.018	15.3	0.4	0.056	13.7	0.2	2.1	1	1	0	1	1	1	0	AAA	domain
NTPase_1	PF03266.10	gi|297527494|ref|YP_003669518.1|	-	0.023	14.4	0.1	0.058	13.1	0.1	1.7	1	0	0	1	1	1	0	NTPase
AAA_22	PF13401.1	gi|297527494|ref|YP_003669518.1|	-	0.028	14.5	0.0	0.08	13.0	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
ArgK	PF03308.11	gi|297527494|ref|YP_003669518.1|	-	0.069	11.9	0.0	0.14	10.9	0.0	1.5	1	0	0	1	1	1	0	ArgK	protein
VirE	PF05272.6	gi|297527494|ref|YP_003669518.1|	-	0.1	12.0	0.2	0.37	10.2	0.0	2.0	2	0	0	2	2	2	0	Virulence-associated	protein	E
CbiA	PF01656.18	gi|297527494|ref|YP_003669518.1|	-	0.21	10.9	1.6	0.34	10.2	0.1	2.0	2	1	0	3	3	3	0	CobQ/CobB/MinD/ParA	nucleotide	binding	domain
TF_Zn_Ribbon	PF08271.7	gi|297527495|ref|YP_003669519.1|	-	3.9e-11	42.0	0.6	1.4e-10	40.3	0.4	2.0	1	0	0	1	1	1	1	TFIIB	zinc-binding
Lar_restr_allev	PF14354.1	gi|297527495|ref|YP_003669519.1|	-	0.017	15.4	0.2	0.037	14.3	0.1	1.5	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
OrfB_Zn_ribbon	PF07282.6	gi|297527495|ref|YP_003669519.1|	-	0.027	14.1	1.4	0.039	13.5	0.1	1.9	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
zf-ribbon_3	PF13248.1	gi|297527495|ref|YP_003669519.1|	-	0.044	13.0	1.2	0.099	11.8	0.9	1.6	1	1	0	1	1	1	0	zinc-ribbon	domain
Prim_Zn_Ribbon	PF08273.7	gi|297527495|ref|YP_003669519.1|	-	0.065	13.3	2.6	0.16	12.0	1.8	1.6	1	1	0	1	1	1	0	Zinc-binding	domain	of	primase-helicase
A2L_zn_ribbon	PF08792.5	gi|297527495|ref|YP_003669519.1|	-	0.15	11.5	0.6	0.3	10.5	0.4	1.5	1	0	0	1	1	1	0	A2L	zinc	ribbon	domain
Zn_Tnp_IS1595	PF12760.2	gi|297527495|ref|YP_003669519.1|	-	0.3	10.9	1.7	5.9	6.7	0.0	2.2	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
Proteasome	PF00227.21	gi|297527496|ref|YP_003669520.1|	-	9.2e-55	184.8	0.0	1.1e-54	184.5	0.0	1.0	1	0	0	1	1	1	1	Proteasome	subunit
Endonuclease_5	PF04493.9	gi|297527497|ref|YP_003669521.1|	-	9.3e-51	172.1	0.1	1.1e-50	171.8	0.1	1.1	1	0	0	1	1	1	1	Endonuclease	V
HTH_Crp_2	PF13545.1	gi|297527498|ref|YP_003669522.1|	-	0.01	15.5	0.0	0.029	14.1	0.0	1.7	2	0	0	2	2	2	0	Crp-like	helix-turn-helix	domain
DUF2582	PF10771.4	gi|297527498|ref|YP_003669522.1|	-	0.063	13.1	0.1	0.13	12.1	0.1	1.5	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF2582)
HTH_9	PF08221.6	gi|297527498|ref|YP_003669522.1|	-	0.096	12.5	0.0	0.27	11.1	0.0	1.8	1	0	0	1	1	1	0	RNA	polymerase	III	subunit	RPC82	helix-turn-helix	domain
AdoHcyase	PF05221.12	gi|297527499|ref|YP_003669523.1|	-	7e-73	244.8	0.0	8.4e-73	244.6	0.0	1.0	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase
AdoHcyase_NAD	PF00670.16	gi|297527499|ref|YP_003669523.1|	-	1.5e-54	184.2	0.1	2.4e-54	183.5	0.1	1.3	1	0	0	1	1	1	1	S-adenosyl-L-homocysteine	hydrolase,	NAD	binding	domain
2-Hacid_dh_C	PF02826.14	gi|297527499|ref|YP_003669523.1|	-	2.8e-08	33.1	0.2	5.5e-08	32.1	0.1	1.4	1	0	0	1	1	1	1	D-isomer	specific	2-hydroxyacid	dehydrogenase,	NAD	binding	domain
IlvN	PF07991.7	gi|297527499|ref|YP_003669523.1|	-	5.5e-08	32.3	0.2	1.2e-07	31.2	0.1	1.6	2	0	0	2	2	2	1	Acetohydroxy	acid	isomeroreductase,	catalytic	domain
CdhD	PF03599.11	gi|297527499|ref|YP_003669523.1|	-	0.013	14.0	0.2	0.05	12.0	0.1	1.7	1	1	0	1	1	1	0	CO	dehydrogenase/acetyl-CoA	synthase	delta	subunit
TrkA_N	PF02254.13	gi|297527499|ref|YP_003669523.1|	-	0.039	13.9	2.0	0.089	12.7	0.1	2.4	3	0	0	3	3	3	0	TrkA-N	domain
Shikimate_DH	PF01488.15	gi|297527499|ref|YP_003669523.1|	-	0.06	13.4	0.1	0.14	12.2	0.1	1.6	1	0	0	1	1	1	0	Shikimate	/	quinate	5-dehydrogenase
Pyr_redox_2	PF07992.9	gi|297527500|ref|YP_003669524.1|	-	8.1e-28	97.6	0.9	1e-27	97.3	0.6	1.2	1	0	0	1	1	1	1	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox_3	PF13738.1	gi|297527500|ref|YP_003669524.1|	-	7.6e-19	68.5	0.2	3.8e-15	56.5	0.0	2.3	1	1	1	2	2	2	2	Pyridine	nucleotide-disulphide	oxidoreductase
Pyr_redox	PF00070.22	gi|297527500|ref|YP_003669524.1|	-	1.6e-16	60.4	2.9	1.1e-12	48.1	0.0	2.8	3	0	0	3	3	3	2	Pyridine	nucleotide-disulphide	oxidoreductase
FAD_binding_2	PF00890.19	gi|297527500|ref|YP_003669524.1|	-	6.2e-10	38.4	8.8	2.2e-05	23.4	1.6	4.6	3	1	2	5	5	5	3	FAD	binding	domain
FAD_oxidored	PF12831.2	gi|297527500|ref|YP_003669524.1|	-	1e-08	34.7	0.5	4.4e-07	29.3	0.0	2.8	2	1	1	3	3	3	1	FAD	dependent	oxidoreductase
Thi4	PF01946.12	gi|297527500|ref|YP_003669524.1|	-	1.7e-08	33.8	0.8	5.5e-05	22.3	0.1	2.4	2	0	0	2	2	2	2	Thi4	family
DAO	PF01266.19	gi|297527500|ref|YP_003669524.1|	-	5.2e-07	28.8	5.5	0.00037	19.5	0.7	3.7	3	1	1	4	4	4	2	FAD	dependent	oxidoreductase
HI0933_like	PF03486.9	gi|297527500|ref|YP_003669524.1|	-	2.7e-06	26.1	0.9	0.00027	19.5	0.1	2.9	3	0	0	3	3	3	1	HI0933-like	protein
FAD_binding_3	PF01494.14	gi|297527500|ref|YP_003669524.1|	-	1.8e-05	23.9	1.2	0.0035	16.4	0.7	2.3	2	0	0	2	2	2	2	FAD	binding	domain
GIDA	PF01134.17	gi|297527500|ref|YP_003669524.1|	-	2.3e-05	23.4	6.5	0.00032	19.6	0.5	3.2	3	1	0	3	3	3	1	Glucose	inhibited	division	protein	A
NAD_binding_7	PF13241.1	gi|297527500|ref|YP_003669524.1|	-	0.00026	21.2	0.2	0.31	11.3	0.0	2.4	2	0	0	2	2	2	2	Putative	NAD(P)-binding
K_oxygenase	PF13434.1	gi|297527500|ref|YP_003669524.1|	-	0.00027	19.9	0.1	0.7	8.7	0.0	3.1	2	1	1	3	3	3	1	L-lysine	6-monooxygenase	(NADPH-requiring)
Trp_halogenase	PF04820.9	gi|297527500|ref|YP_003669524.1|	-	0.0029	16.3	1.6	0.082	11.5	0.4	2.1	2	0	0	2	2	2	1	Tryptophan	halogenase
NAD_binding_8	PF13450.1	gi|297527500|ref|YP_003669524.1|	-	0.0032	17.4	5.6	0.032	14.2	0.7	2.6	3	0	0	3	3	2	1	NAD(P)-binding	Rossmann-like	domain
VanW	PF04294.8	gi|297527500|ref|YP_003669524.1|	-	0.0056	15.8	0.0	0.017	14.3	0.0	1.7	2	0	0	2	2	2	1	VanW	like	protein
Lycopene_cycl	PF05834.7	gi|297527500|ref|YP_003669524.1|	-	0.0078	15.1	1.1	0.099	11.5	0.5	2.1	2	0	0	2	2	2	1	Lycopene	cyclase	protein
NAD_Gly3P_dh_N	PF01210.18	gi|297527500|ref|YP_003669524.1|	-	0.038	13.7	0.3	0.19	11.4	0.0	2.0	2	0	0	2	2	2	0	NAD-dependent	glycerol-3-phosphate	dehydrogenase	N-terminus
Shikimate_DH	PF01488.15	gi|297527500|ref|YP_003669524.1|	-	0.043	13.9	0.2	4.6	7.3	0.0	2.3	2	0	0	2	2	2	0	Shikimate	/	quinate	5-dehydrogenase
NAD_binding_9	PF13454.1	gi|297527500|ref|YP_003669524.1|	-	0.047	13.4	0.6	16	5.2	0.2	3.1	3	0	0	3	3	3	0	FAD-NAD(P)-binding
AlaDh_PNT_C	PF01262.16	gi|297527500|ref|YP_003669524.1|	-	0.068	12.7	1.0	2.8	7.4	0.0	2.5	2	1	0	2	2	2	0	Alanine	dehydrogenase/PNT,	C-terminal	domain
PhoU	PF01895.14	gi|297527501|ref|YP_003669525.1|	-	1.4e-23	83.1	8.1	2.4e-14	53.5	0.5	2.3	2	0	0	2	2	2	2	PhoU	domain
PhoU_div	PF01865.11	gi|297527501|ref|YP_003669525.1|	-	0.003	16.7	5.6	0.13	11.4	0.5	3.1	1	1	1	3	3	3	2	Protein	of	unknown	function	DUF47
DUF2262	PF10020.4	gi|297527501|ref|YP_003669525.1|	-	0.97	9.6	9.3	1.1	9.4	1.2	2.1	2	0	0	2	2	2	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2262)
ABC_tran	PF00005.22	gi|297527502|ref|YP_003669526.1|	-	2.2e-35	121.9	0.0	3e-35	121.4	0.0	1.2	1	0	0	1	1	1	1	ABC	transporter
AAA_21	PF13304.1	gi|297527502|ref|YP_003669526.1|	-	7.8e-14	52.3	0.1	8.3e-08	32.5	0.0	2.2	1	1	1	2	2	2	2	AAA	domain
SMC_N	PF02463.14	gi|297527502|ref|YP_003669526.1|	-	7.9e-07	28.5	0.1	0.0023	17.1	0.0	2.1	2	0	0	2	2	2	2	RecF/RecN/SMC	N	terminal	domain
AAA_15	PF13175.1	gi|297527502|ref|YP_003669526.1|	-	0.00015	20.9	2.2	0.0076	15.3	0.1	2.1	2	0	0	2	2	2	1	AAA	ATPase	domain
AAA_29	PF13555.1	gi|297527502|ref|YP_003669526.1|	-	0.00024	20.5	0.0	0.00046	19.6	0.0	1.4	1	0	0	1	1	1	1	P-loop	containing	region	of	AAA	domain
AAA_17	PF13207.1	gi|297527502|ref|YP_003669526.1|	-	0.0013	19.5	0.1	0.002	18.9	0.0	1.6	1	1	0	1	1	1	1	AAA	domain
AAA_23	PF13476.1	gi|297527502|ref|YP_003669526.1|	-	0.0023	18.2	1.3	0.003	17.9	0.3	1.6	2	0	0	2	2	2	1	AAA	domain
DUF258	PF03193.11	gi|297527502|ref|YP_003669526.1|	-	0.0032	16.6	0.0	0.0061	15.7	0.0	1.4	1	0	0	1	1	1	1	Protein	of	unknown	function,	DUF258
AAA_22	PF13401.1	gi|297527502|ref|YP_003669526.1|	-	0.0034	17.5	0.1	0.0098	16.0	0.0	1.9	1	1	0	1	1	1	1	AAA	domain
AAA_16	PF13191.1	gi|297527502|ref|YP_003669526.1|	-	0.0036	17.3	0.1	0.0061	16.5	0.0	1.6	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_19	PF13245.1	gi|297527502|ref|YP_003669526.1|	-	0.004	16.8	0.0	0.015	15.0	0.0	1.9	2	0	0	2	2	2	1	Part	of	AAA	domain
AAA_18	PF13238.1	gi|297527502|ref|YP_003669526.1|	-	0.0042	17.4	0.0	0.015	15.5	0.0	1.9	2	1	0	2	2	2	1	AAA	domain
AAA_10	PF12846.2	gi|297527502|ref|YP_003669526.1|	-	0.0096	15.3	0.1	0.042	13.2	0.0	1.9	2	1	0	2	2	2	1	AAA-like	domain
Arch_ATPase	PF01637.13	gi|297527502|ref|YP_003669526.1|	-	0.027	14.1	0.0	0.049	13.3	0.0	1.4	1	0	0	1	1	1	0	Archaeal	ATPase
RNA12	PF10443.4	gi|297527502|ref|YP_003669526.1|	-	0.028	12.9	0.0	0.043	12.3	0.0	1.2	1	0	0	1	1	1	0	RNA12	protein
NB-ARC	PF00931.17	gi|297527502|ref|YP_003669526.1|	-	0.03	13.1	0.1	0.32	9.7	0.0	2.0	2	0	0	2	2	2	0	NB-ARC	domain
cobW	PF02492.14	gi|297527502|ref|YP_003669526.1|	-	0.034	13.6	0.0	0.049	13.0	0.0	1.3	1	0	0	1	1	1	0	CobW/HypB/UreG,	nucleotide-binding	domain
AAA_PrkA	PF08298.6	gi|297527502|ref|YP_003669526.1|	-	0.036	12.7	0.0	0.065	11.9	0.0	1.3	1	0	0	1	1	1	0	PrkA	AAA	domain
SbcCD_C	PF13558.1	gi|297527502|ref|YP_003669526.1|	-	0.045	13.6	0.0	0.35	10.8	0.0	2.1	1	1	0	1	1	1	0	Putative	exonuclease	SbcCD,	C	subunit
T2SE	PF00437.15	gi|297527502|ref|YP_003669526.1|	-	0.05	12.4	0.0	0.082	11.7	0.0	1.3	1	0	0	1	1	1	0	Type	II/IV	secretion	system	protein
ABC_ATPase	PF09818.4	gi|297527502|ref|YP_003669526.1|	-	0.056	12.0	0.0	0.51	8.8	0.0	2.0	2	0	0	2	2	2	0	Predicted	ATPase	of	the	ABC	class
MobB	PF03205.9	gi|297527502|ref|YP_003669526.1|	-	0.075	12.7	0.0	0.16	11.7	0.0	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_25	PF13481.1	gi|297527502|ref|YP_003669526.1|	-	0.098	12.0	0.0	0.22	10.9	0.0	1.5	1	0	0	1	1	1	0	AAA	domain
Adeno_IVa2	PF02456.10	gi|297527502|ref|YP_003669526.1|	-	0.11	11.1	0.0	0.19	10.3	0.0	1.3	1	0	0	1	1	1	0	Adenovirus	IVa2	protein
AAA_33	PF13671.1	gi|297527502|ref|YP_003669526.1|	-	0.11	12.3	0.1	0.26	11.1	0.1	1.6	1	1	0	1	1	1	0	AAA	domain
AAA_14	PF13173.1	gi|297527502|ref|YP_003669526.1|	-	0.12	12.3	0.0	0.45	10.4	0.0	1.9	2	0	0	2	2	2	0	AAA	domain
AAA_30	PF13604.1	gi|297527502|ref|YP_003669526.1|	-	0.13	11.7	0.0	0.22	11.0	0.0	1.3	1	0	0	1	1	1	0	AAA	domain
BPD_transp_1	PF00528.17	gi|297527503|ref|YP_003669527.1|	-	8.4e-11	41.7	15.6	8.4e-11	41.7	10.8	2.2	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
DUF2238	PF09997.4	gi|297527503|ref|YP_003669527.1|	-	0.61	9.4	5.0	0.2	11.0	0.4	2.3	2	1	1	3	3	3	0	Predicted	membrane	protein	(DUF2238)
BPD_transp_1	PF00528.17	gi|297527504|ref|YP_003669528.1|	-	1.3e-09	37.8	21.3	1.3e-09	37.8	14.8	2.4	1	1	1	2	2	2	1	Binding-protein-dependent	transport	system	inner	membrane	component
Amastin	PF07344.6	gi|297527504|ref|YP_003669528.1|	-	1.4	8.4	6.7	3.2	7.3	4.3	2.0	1	1	1	2	2	2	0	Amastin	surface	glycoprotein
IspA	PF04279.10	gi|297527504|ref|YP_003669528.1|	-	2.8	7.8	9.4	0.28	11.1	1.8	2.6	3	1	0	3	3	3	0	Intracellular	septation	protein	A
PBP_like_2	PF12849.2	gi|297527505|ref|YP_003669529.1|	-	3.5e-52	177.6	0.1	4.3e-52	177.3	0.0	1.0	1	0	0	1	1	1	1	PBP	superfamily	domain
SBP_bac_1	PF01547.20	gi|297527505|ref|YP_003669529.1|	-	8.5e-17	61.8	0.8	1.6e-16	60.9	0.6	1.4	1	1	0	1	1	1	1	Bacterial	extracellular	solute-binding	protein
PBP_like	PF12727.2	gi|297527505|ref|YP_003669529.1|	-	0.0027	16.6	0.0	0.036	13.0	0.0	2.3	1	1	0	1	1	1	1	PBP	superfamily	domain
PhoU	PF01895.14	gi|297527506|ref|YP_003669530.1|	-	7.7e-23	80.7	7.6	3.3e-16	59.5	1.2	2.7	2	1	0	2	2	2	2	PhoU	domain
Antitoxin-MazE	PF04014.13	gi|297527506|ref|YP_003669530.1|	-	2.5e-08	33.4	0.1	6.1e-08	32.2	0.0	1.6	1	0	0	1	1	1	1	Antidote-toxin	recognition	MazE
Herpes_UL6	PF01763.11	gi|297527506|ref|YP_003669530.1|	-	0.0088	14.2	0.5	0.012	13.8	0.0	1.5	2	0	0	2	2	2	1	Herpesvirus	UL6	like
YicC_N	PF03755.8	gi|297527506|ref|YP_003669530.1|	-	0.012	15.5	0.2	0.033	14.1	0.0	1.8	2	0	0	2	2	2	0	YicC-like	family,	N-terminal	region
UPF0158	PF03682.8	gi|297527506|ref|YP_003669530.1|	-	0.02	14.5	1.9	0.02	14.4	0.2	1.8	2	0	0	2	2	2	0	Uncharacterised	protein	family	(UPF0158)
P22_AR_C	PF10548.4	gi|297527506|ref|YP_003669530.1|	-	0.044	13.6	0.5	1.8	8.5	0.0	2.4	2	0	0	2	2	2	0	P22AR	C-terminal	domain
PspA_IM30	PF04012.7	gi|297527506|ref|YP_003669530.1|	-	0.15	11.4	0.8	1.8	7.8	0.1	2.1	2	0	0	2	2	2	0	PspA/IM30	family
SRP54_N	PF02881.14	gi|297527506|ref|YP_003669530.1|	-	0.5	10.5	0.1	0.5	10.5	0.0	3.7	3	0	0	3	3	3	0	SRP54-type	protein,	helical	bundle	domain
TMF_DNA_bd	PF12329.3	gi|297527506|ref|YP_003669530.1|	-	3.6	7.4	8.5	0.32	10.8	2.0	2.1	2	1	0	2	2	2	0	TATA	element	modulatory	factor	1	DNA	binding
Aldo_ket_red	PF00248.16	gi|297527507|ref|YP_003669531.1|	-	7e-78	261.3	0.0	7.9e-78	261.1	0.0	1.0	1	0	0	1	1	1	1	Aldo/keto	reductase	family
DUF2122	PF09895.4	gi|297527508|ref|YP_003669532.1|	-	3.5e-27	94.6	0.1	4.2e-27	94.4	0.1	1.1	1	0	0	1	1	1	1	RecB-family	nuclease	(DUF2122)
DNA_methylase	PF00145.12	gi|297527509|ref|YP_003669533.1|	-	1.7e-52	178.5	0.0	4.5e-35	121.3	0.0	2.1	1	1	1	2	2	2	2	C-5	cytosine-specific	DNA	methylase
Methyltransf_26	PF13659.1	gi|297527509|ref|YP_003669533.1|	-	0.00079	19.4	0.0	0.0015	18.5	0.0	1.5	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|297527509|ref|YP_003669533.1|	-	0.0026	17.3	0.0	0.0046	16.5	0.0	1.4	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
MTS	PF05175.9	gi|297527509|ref|YP_003669533.1|	-	0.034	13.5	0.0	0.26	10.6	0.0	2.0	2	0	0	2	2	2	0	Methyltransferase	small	domain
UPF0020	PF01170.13	gi|297527509|ref|YP_003669533.1|	-	0.042	13.4	0.0	0.067	12.7	0.0	1.3	1	0	0	1	1	1	0	Putative	RNA	methylase	family	UPF0020
TFIIE_alpha	PF02002.12	gi|297527510|ref|YP_003669534.1|	-	1.3e-10	40.7	2.8	1.3e-10	40.7	2.0	1.9	2	0	0	2	2	2	1	TFIIE	alpha	subunit
TF_Zn_Ribbon	PF08271.7	gi|297527510|ref|YP_003669534.1|	-	0.0056	15.9	0.4	0.013	14.8	0.3	1.7	1	0	0	1	1	1	1	TFIIB	zinc-binding
DsrD	PF08679.6	gi|297527510|ref|YP_003669534.1|	-	0.012	15.5	0.7	3.2	7.8	0.0	2.4	2	0	0	2	2	2	0	Dissimilatory	sulfite	reductase	D	(DsrD)
HTH_15	PF12324.3	gi|297527510|ref|YP_003669534.1|	-	0.025	14.2	0.0	0.054	13.1	0.0	1.6	1	0	0	1	1	1	0	Helix-turn-helix	domain	of	alkylmercury	lyase
CDC37_C	PF08564.5	gi|297527510|ref|YP_003669534.1|	-	0.044	13.6	0.1	0.46	10.3	0.1	2.2	1	1	1	2	2	2	0	Cdc37	C	terminal	domain
Rad50_zn_hook	PF04423.9	gi|297527510|ref|YP_003669534.1|	-	0.053	12.9	4.5	0.42	10.1	0.0	3.3	3	0	0	3	3	3	0	Rad50	zinc	hook	motif
F_actin_cap_B	PF01115.12	gi|297527510|ref|YP_003669534.1|	-	0.092	11.9	0.2	0.14	11.3	0.1	1.4	1	0	0	1	1	1	0	F-actin	capping	protein,	beta	subunit
NADHdh-2_N	PF12155.3	gi|297527510|ref|YP_003669534.1|	-	0.096	12.8	0.0	0.14	12.3	0.0	1.2	1	0	0	1	1	1	0	NADH	dehydrogenase	subunit	2	N-terminal
DUF1938	PF09153.5	gi|297527510|ref|YP_003669534.1|	-	0.16	11.7	0.9	8.9	6.2	0.0	3.0	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF1938)
Trm56	PF01994.11	gi|297527511|ref|YP_003669535.1|	-	7.7e-51	170.9	0.0	9.9e-51	170.5	0.0	1.1	1	0	0	1	1	1	1	tRNA	ribose	2'-O-methyltransferase,	aTrm56
SPOUT_MTase_2	PF14419.1	gi|297527511|ref|YP_003669535.1|	-	0.031	13.4	0.4	4.2	6.5	0.0	2.2	1	1	1	2	2	2	0	AF2226-like	SPOUT	RNA	Methylase	fused	to	THUMP
MMR_HSR1	PF01926.18	gi|297527512|ref|YP_003669536.1|	-	3.3e-19	68.9	0.3	8.9e-19	67.5	0.0	1.8	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
GTP_EFTU	PF00009.22	gi|297527512|ref|YP_003669536.1|	-	9e-11	41.5	2.9	4.6e-07	29.4	0.2	3.0	3	0	0	3	3	3	2	Elongation	factor	Tu	GTP	binding	domain
Arf	PF00025.16	gi|297527512|ref|YP_003669536.1|	-	1.6e-08	33.9	0.5	5.7e-08	32.1	0.1	2.1	2	1	0	2	2	2	1	ADP-ribosylation	factor	family
FeoB_N	PF02421.13	gi|297527512|ref|YP_003669536.1|	-	1.7e-08	33.9	1.2	2.5e-08	33.3	0.1	1.8	2	1	0	2	2	2	1	Ferrous	iron	transport	protein	B
SRPRB	PF09439.5	gi|297527512|ref|YP_003669536.1|	-	0.00018	20.7	0.0	0.00042	19.5	0.0	1.6	1	0	0	1	1	1	1	Signal	recognition	particle	receptor	beta	subunit
Miro	PF08477.8	gi|297527512|ref|YP_003669536.1|	-	0.0024	18.3	0.0	0.0054	17.2	0.0	1.6	1	0	0	1	1	1	1	Miro-like	protein
PduV-EutP	PF10662.4	gi|297527512|ref|YP_003669536.1|	-	0.0034	16.8	0.8	1.5	8.2	0.4	2.4	2	0	0	2	2	2	2	Ethanolamine	utilisation	-	propanediol	utilisation
Ras	PF00071.17	gi|297527512|ref|YP_003669536.1|	-	0.0038	16.6	0.0	0.016	14.5	0.0	2.0	2	1	0	2	2	2	1	Ras	family
G-alpha	PF00503.15	gi|297527512|ref|YP_003669536.1|	-	0.0039	15.9	0.5	0.27	9.8	0.0	2.6	1	1	1	3	3	3	1	G-protein	alpha	subunit
GTP-bdg_N	PF13167.1	gi|297527512|ref|YP_003669536.1|	-	0.0096	16.0	0.1	0.027	14.5	0.1	1.8	1	0	0	1	1	1	1	GTP-binding	GTPase	N-terminal
ATP_bind_1	PF03029.12	gi|297527512|ref|YP_003669536.1|	-	0.012	15.1	0.1	1.2	8.6	0.0	2.9	3	0	0	3	3	3	0	Conserved	hypothetical	ATP	binding	protein
AAA_28	PF13521.1	gi|297527512|ref|YP_003669536.1|	-	0.018	14.9	0.0	0.047	13.6	0.0	1.8	1	0	0	1	1	1	0	AAA	domain
Dynamin_N	PF00350.18	gi|297527512|ref|YP_003669536.1|	-	0.033	13.9	0.7	3.6	7.3	0.0	3.1	2	1	1	3	3	3	0	Dynamin	family
Glyco_transf_54	PF04666.8	gi|297527512|ref|YP_003669536.1|	-	0.038	12.7	0.3	0.077	11.7	0.0	1.7	2	0	0	2	2	2	0	N-Acetylglucosaminyltransferase-IV	(GnT-IV)	conserved	region
AAA_17	PF13207.1	gi|297527512|ref|YP_003669536.1|	-	0.062	14.1	2.3	0.09	13.5	0.0	2.4	2	2	0	2	2	2	0	AAA	domain
cobW	PF02492.14	gi|297527512|ref|YP_003669536.1|	-	0.073	12.5	6.5	2.4	7.5	0.3	3.2	4	0	0	4	4	4	0	CobW/HypB/UreG,	nucleotide-binding	domain
HTH_31	PF13560.1	gi|297527513|ref|YP_003669537.1|	-	1.1e-10	41.5	2.0	2.2e-10	40.5	1.4	1.5	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_3	PF01381.17	gi|297527513|ref|YP_003669537.1|	-	1.6e-09	37.4	2.8	2.4e-09	36.8	1.9	1.3	1	0	0	1	1	1	1	Helix-turn-helix
HTH_19	PF12844.2	gi|297527513|ref|YP_003669537.1|	-	5.6e-08	32.7	0.6	9.4e-08	32.0	0.4	1.3	1	0	0	1	1	1	1	Helix-turn-helix	domain
HTH_25	PF13413.1	gi|297527513|ref|YP_003669537.1|	-	0.0039	16.8	1.7	0.0039	16.8	1.2	1.9	2	0	0	2	2	2	1	Helix-turn-helix	domain
HTH_37	PF13744.1	gi|297527513|ref|YP_003669537.1|	-	0.063	13.0	0.2	0.11	12.3	0.2	1.4	1	0	0	1	1	1	0	Helix-turn-helix	domain
zinc_ribbon_2	PF13240.1	gi|297527513|ref|YP_003669537.1|	-	0.084	12.3	1.3	7	6.2	0.1	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
DUF3619	PF12279.3	gi|297527513|ref|YP_003669537.1|	-	0.15	12.1	0.4	0.21	11.6	0.3	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3619)
DZR	PF12773.2	gi|297527513|ref|YP_003669537.1|	-	0.24	11.2	3.1	1.2	8.9	2.1	2.0	1	1	0	1	1	1	0	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|297527513|ref|YP_003669537.1|	-	0.95	8.7	5.1	6.1	6.1	3.5	2.0	1	1	0	1	1	1	0	zinc-ribbon	domain
AAA	PF00004.24	gi|297527514|ref|YP_003669538.1|	-	4.7e-44	149.7	0.0	9.5e-44	148.7	0.0	1.5	1	0	0	1	1	1	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_2	PF07724.9	gi|297527514|ref|YP_003669538.1|	-	5.6e-07	29.6	0.0	1.7e-06	28.0	0.0	1.8	1	0	0	1	1	1	1	AAA	domain	(Cdc48	subfamily)
AAA_16	PF13191.1	gi|297527514|ref|YP_003669538.1|	-	4.6e-06	26.7	0.1	2e-05	24.6	0.1	1.9	1	1	0	1	1	1	1	AAA	ATPase	domain
AAA_5	PF07728.9	gi|297527514|ref|YP_003669538.1|	-	1e-05	25.2	0.1	4.3e-05	23.2	0.1	2.1	1	1	0	1	1	1	1	AAA	domain	(dynein-related	subfamily)
RuvB_N	PF05496.7	gi|297527514|ref|YP_003669538.1|	-	1.3e-05	24.3	0.0	2.8e-05	23.2	0.0	1.5	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
AAA_22	PF13401.1	gi|297527514|ref|YP_003669538.1|	-	2.2e-05	24.6	0.3	0.0017	18.4	0.1	2.6	2	1	0	2	2	1	1	AAA	domain
AAA_14	PF13173.1	gi|297527514|ref|YP_003669538.1|	-	0.00024	21.0	0.0	0.00071	19.4	0.0	1.9	1	0	0	1	1	1	1	AAA	domain
AAA_17	PF13207.1	gi|297527514|ref|YP_003669538.1|	-	0.00055	20.7	1.1	0.0011	19.7	0.2	2.2	2	1	0	2	2	1	1	AAA	domain
TIP49	PF06068.8	gi|297527514|ref|YP_003669538.1|	-	0.0011	17.8	0.0	0.0023	16.7	0.0	1.6	1	0	0	1	1	1	1	TIP49	C-terminus
Zeta_toxin	PF06414.7	gi|297527514|ref|YP_003669538.1|	-	0.0011	18.0	0.0	0.0025	16.9	0.0	1.6	1	0	0	1	1	1	1	Zeta	toxin
IstB_IS21	PF01695.12	gi|297527514|ref|YP_003669538.1|	-	0.0015	17.9	0.0	0.0032	16.9	0.0	1.4	1	0	0	1	1	1	1	IstB-like	ATP	binding	protein
DUF815	PF05673.8	gi|297527514|ref|YP_003669538.1|	-	0.0022	16.9	0.0	0.0074	15.2	0.0	1.8	2	0	0	2	2	2	1	Protein	of	unknown	function	(DUF815)
AAA_28	PF13521.1	gi|297527514|ref|YP_003669538.1|	-	0.0028	17.6	0.0	0.006	16.5	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
Mg_chelatase	PF01078.16	gi|297527514|ref|YP_003669538.1|	-	0.0036	16.4	0.1	0.013	14.6	0.0	1.9	2	0	0	2	2	2	1	Magnesium	chelatase,	subunit	ChlI
AAA_33	PF13671.1	gi|297527514|ref|YP_003669538.1|	-	0.0041	16.9	0.0	0.0083	16.0	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
AAA_19	PF13245.1	gi|297527514|ref|YP_003669538.1|	-	0.0048	16.6	0.1	0.013	15.2	0.1	1.7	1	0	0	1	1	1	1	Part	of	AAA	domain
RNA_helicase	PF00910.17	gi|297527514|ref|YP_003669538.1|	-	0.0083	16.2	0.0	0.02	15.0	0.0	1.7	1	0	0	1	1	1	1	RNA	helicase
Sigma54_activ_2	PF14532.1	gi|297527514|ref|YP_003669538.1|	-	0.013	15.5	0.0	0.029	14.4	0.0	1.6	1	0	0	1	1	1	0	Sigma-54	interaction	domain
Arch_ATPase	PF01637.13	gi|297527514|ref|YP_003669538.1|	-	0.014	15.0	1.1	0.046	13.4	0.0	2.4	2	1	0	2	2	2	0	Archaeal	ATPase
NACHT	PF05729.7	gi|297527514|ref|YP_003669538.1|	-	0.021	14.5	0.2	0.13	11.8	0.1	2.1	2	0	0	2	2	2	0	NACHT	domain
SKI	PF01202.17	gi|297527514|ref|YP_003669538.1|	-	0.022	14.6	0.3	1.1	9.1	0.1	2.6	2	1	0	2	2	2	0	Shikimate	kinase
NB-ARC	PF00931.17	gi|297527514|ref|YP_003669538.1|	-	0.023	13.5	0.0	0.05	12.4	0.0	1.6	1	0	0	1	1	1	0	NB-ARC	domain
AAA_25	PF13481.1	gi|297527514|ref|YP_003669538.1|	-	0.024	14.0	0.8	0.26	10.6	0.1	2.3	1	1	0	2	2	2	0	AAA	domain
AAA_18	PF13238.1	gi|297527514|ref|YP_003669538.1|	-	0.024	14.9	0.1	0.1	12.9	0.0	2.2	2	0	0	2	2	1	0	AAA	domain
AAA_24	PF13479.1	gi|297527514|ref|YP_003669538.1|	-	0.029	13.9	0.1	0.055	13.0	0.1	1.4	1	0	0	1	1	1	0	AAA	domain
KaiC	PF06745.8	gi|297527514|ref|YP_003669538.1|	-	0.029	13.4	0.1	0.14	11.2	0.1	2.1	1	1	0	1	1	1	0	KaiC
Sigma54_activat	PF00158.21	gi|297527514|ref|YP_003669538.1|	-	0.065	12.7	0.1	0.46	9.9	0.0	2.4	4	0	0	4	4	4	0	Sigma-54	interaction	domain
ABC_tran	PF00005.22	gi|297527514|ref|YP_003669538.1|	-	0.073	13.3	0.0	0.18	12.0	0.0	1.7	1	0	0	1	1	1	0	ABC	transporter
ATP-synt_ab	PF00006.20	gi|297527514|ref|YP_003669538.1|	-	0.11	12.0	0.0	0.18	11.3	0.0	1.3	1	0	0	1	1	1	0	ATP	synthase	alpha/beta	family,	nucleotide-binding	domain
Parvo_NS1	PF01057.12	gi|297527514|ref|YP_003669538.1|	-	0.13	11.1	0.0	0.25	10.1	0.0	1.4	1	0	0	1	1	1	0	Parvovirus	non-structural	protein	NS1
Cytidylate_kin2	PF13189.1	gi|297527514|ref|YP_003669538.1|	-	0.14	12.0	2.5	8.4	6.2	0.8	2.3	2	0	0	2	2	2	0	Cytidylate	kinase-like	family
TGT_C2	PF14810.1	gi|297527515|ref|YP_003669539.1|	-	4.4e-16	58.4	0.0	6.7e-16	57.9	0.0	1.3	1	0	0	1	1	1	1	Patch-forming	domain	C2	of	tRNA-guanine	transglycosylase
PUA	PF01472.15	gi|297527515|ref|YP_003669539.1|	-	6.8e-12	44.9	0.0	2e-11	43.4	0.0	1.7	2	0	0	2	2	2	1	PUA	domain
RPEL	PF02755.10	gi|297527515|ref|YP_003669539.1|	-	0.12	11.7	1.0	0.29	10.5	0.7	1.6	1	0	0	1	1	1	0	RPEL	repeat
PAC2	PF09754.4	gi|297527516|ref|YP_003669540.1|	-	5.6e-40	137.5	0.0	7e-40	137.2	0.0	1.0	1	0	0	1	1	1	1	PAC2	family
TGT	PF01702.13	gi|297527517|ref|YP_003669541.1|	-	5.8e-46	156.7	0.0	8.4e-46	156.1	0.0	1.2	1	0	0	1	1	1	1	Queuine	tRNA-ribosyltransferase
PUB	PF09409.5	gi|297527517|ref|YP_003669541.1|	-	0.16	11.7	1.9	0.55	10.0	0.3	2.5	3	0	0	3	3	3	0	PUB	domain
Lsm_C	PF14894.1	gi|297527518|ref|YP_003669542.1|	-	6.1e-29	99.3	1.0	9.4e-29	98.7	0.3	1.6	2	0	0	2	2	2	1	Lsm	C-terminal
LSM	PF01423.17	gi|297527518|ref|YP_003669542.1|	-	7.3e-09	35.0	0.0	1.2e-08	34.3	0.0	1.3	1	0	0	1	1	1	1	LSM	domain
SM-ATX	PF14438.1	gi|297527518|ref|YP_003669542.1|	-	0.00083	19.2	0.0	0.0012	18.6	0.0	1.3	1	0	0	1	1	1	1	Ataxin	2	SM	domain
Gemin6	PF06372.7	gi|297527518|ref|YP_003669542.1|	-	0.0021	17.4	0.0	0.0029	16.9	0.0	1.3	1	0	0	1	1	1	1	Gemin6	protein
RNA_pol_Rpb8	PF03870.10	gi|297527519|ref|YP_003669543.1|	-	0.0062	16.7	0.1	1.4	9.1	0.0	2.1	1	1	1	2	2	2	2	RNA	polymerase	Rpb8
GTP-bdg_N	PF13167.1	gi|297527519|ref|YP_003669543.1|	-	0.11	12.6	0.2	0.19	11.8	0.1	1.5	1	1	0	1	1	1	0	GTP-binding	GTPase	N-terminal
DnaI_N	PF07319.6	gi|297527520|ref|YP_003669544.1|	-	0.065	13.4	0.6	0.21	11.8	0.1	1.8	1	1	1	2	2	2	0	Primosomal	protein	DnaI	N-terminus
DUF87	PF01935.12	gi|297527521|ref|YP_003669545.1|	-	3.1e-25	89.3	2.0	4.6e-25	88.7	1.4	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	DUF87
AAA_10	PF12846.2	gi|297527521|ref|YP_003669545.1|	-	4.6e-23	82.1	0.1	1.3e-22	80.6	0.1	1.6	1	1	0	1	1	1	1	AAA-like	domain
TrwB_AAD_bind	PF10412.4	gi|297527521|ref|YP_003669545.1|	-	9.5e-10	37.6	0.1	2.8e-05	22.9	0.0	2.1	2	0	0	2	2	2	2	Type	IV	secretion-system	coupling	protein	DNA-binding	domain
DUF853	PF05872.7	gi|297527521|ref|YP_003669545.1|	-	4e-09	35.3	0.0	0.00056	18.3	0.0	2.2	2	0	0	2	2	2	2	Bacterial	protein	of	unknown	function	(DUF853)
FtsK_SpoIIIE	PF01580.13	gi|297527521|ref|YP_003669545.1|	-	4.6e-06	26.2	0.0	8.8e-06	25.3	0.0	1.4	1	0	0	1	1	1	1	FtsK/SpoIIIE	family
DEAD	PF00270.24	gi|297527521|ref|YP_003669545.1|	-	8.7e-05	22.0	0.0	0.00077	19.0	0.0	2.1	1	1	0	1	1	1	1	DEAD/DEAH	box	helicase
AAA_22	PF13401.1	gi|297527521|ref|YP_003669545.1|	-	0.00046	20.3	1.0	0.19	11.8	0.6	2.8	1	1	0	1	1	1	1	AAA	domain
T4SS-DNA_transf	PF02534.9	gi|297527521|ref|YP_003669545.1|	-	0.00048	18.8	0.1	0.034	12.7	0.1	2.1	2	0	0	2	2	2	1	Type	IV	secretory	system	Conjugative	DNA	transfer
Zot	PF05707.7	gi|297527521|ref|YP_003669545.1|	-	0.00061	19.3	0.0	0.12	11.8	0.0	2.4	2	0	0	2	2	2	1	Zonular	occludens	toxin	(Zot)
AAA	PF00004.24	gi|297527521|ref|YP_003669545.1|	-	0.00062	19.9	0.2	0.33	11.1	0.0	2.4	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
T2SE	PF00437.15	gi|297527521|ref|YP_003669545.1|	-	0.0025	16.7	0.0	0.0039	16.1	0.0	1.3	1	0	0	1	1	1	1	Type	II/IV	secretion	system	protein
MobB	PF03205.9	gi|297527521|ref|YP_003669545.1|	-	0.0043	16.7	0.4	0.01	15.5	0.3	1.5	1	0	0	1	1	1	1	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
AAA_19	PF13245.1	gi|297527521|ref|YP_003669545.1|	-	0.0047	16.6	0.0	0.0094	15.6	0.0	1.4	1	0	0	1	1	1	1	Part	of	AAA	domain
TraG-D_C	PF12696.2	gi|297527521|ref|YP_003669545.1|	-	0.0049	16.7	0.0	0.0089	15.8	0.0	1.4	1	0	0	1	1	1	1	TraM	recognition	site	of	TraD	and	TraG
ResIII	PF04851.10	gi|297527521|ref|YP_003669545.1|	-	0.0056	16.5	0.1	0.021	14.6	0.1	1.8	2	0	0	2	2	2	1	Type	III	restriction	enzyme,	res	subunit
Arch_ATPase	PF01637.13	gi|297527521|ref|YP_003669545.1|	-	0.0062	16.2	0.6	0.016	14.9	0.0	1.8	2	0	0	2	2	2	1	Archaeal	ATPase
RuvB_N	PF05496.7	gi|297527521|ref|YP_003669545.1|	-	0.0094	15.0	0.0	0.016	14.2	0.0	1.3	1	0	0	1	1	1	1	Holliday	junction	DNA	helicase	ruvB	N-terminus
Zeta_toxin	PF06414.7	gi|297527521|ref|YP_003669545.1|	-	0.018	14.1	0.0	0.078	12.0	0.0	1.9	2	0	0	2	2	2	0	Zeta	toxin
SRP54	PF00448.17	gi|297527521|ref|YP_003669545.1|	-	0.039	13.3	0.1	0.069	12.5	0.1	1.4	1	0	0	1	1	1	0	SRP54-type	protein,	GTPase	domain
AAA_17	PF13207.1	gi|297527521|ref|YP_003669545.1|	-	0.04	14.7	1.1	0.38	11.5	0.7	2.5	1	1	0	1	1	1	0	AAA	domain
UvrD-helicase	PF00580.16	gi|297527521|ref|YP_003669545.1|	-	0.053	12.8	0.4	0.11	11.7	0.3	1.4	1	0	0	1	1	1	0	UvrD/REP	helicase	N-terminal	domain
AAA_29	PF13555.1	gi|297527521|ref|YP_003669545.1|	-	0.08	12.4	0.1	0.15	11.6	0.1	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
Pox_A32	PF04665.7	gi|297527521|ref|YP_003669545.1|	-	0.093	12.0	3.3	0.4	9.9	0.1	2.7	2	1	1	3	3	3	0	Poxvirus	A32	protein
AAA_16	PF13191.1	gi|297527521|ref|YP_003669545.1|	-	0.17	11.8	0.1	0.61	10.0	0.0	1.9	2	1	0	2	2	2	0	AAA	ATPase	domain
Cpn60_TCP1	PF00118.19	gi|297527522|ref|YP_003669546.1|	-	1.1e-172	575.0	11.4	1.3e-172	574.8	7.9	1.0	1	0	0	1	1	1	1	TCP-1/cpn60	chaperonin	family
Ribosomal_S17e	PF00833.13	gi|297527523|ref|YP_003669547.1|	-	1.9e-24	85.7	1.7	2e-24	85.7	1.2	1.0	1	0	0	1	1	1	1	Ribosomal	S17
Sld5	PF05916.6	gi|297527523|ref|YP_003669547.1|	-	0.017	15.3	0.2	0.018	15.3	0.2	1.1	1	0	0	1	1	1	0	GINS	complex	protein
UPF0158	PF03682.8	gi|297527524|ref|YP_003669548.1|	-	0.005	16.4	0.1	0.0069	16.0	0.1	1.3	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0158)
RNA_POL_M_15KD	PF02150.11	gi|297527526|ref|YP_003669550.1|	-	1.4e-06	27.8	0.4	2.1e-06	27.3	0.3	1.3	1	0	0	1	1	1	1	RNA	polymerases	M/15	Kd	subunit
zf-NADH-PPase	PF09297.6	gi|297527526|ref|YP_003669550.1|	-	5.8e-06	25.7	1.8	1.6e-05	24.3	1.2	1.7	1	1	0	1	1	1	1	NADH	pyrophosphatase	zinc	ribbon	domain
DUF3945	PF13101.1	gi|297527526|ref|YP_003669550.1|	-	6.4e-05	22.1	0.1	9.2e-05	21.6	0.0	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF3945)
zinc_ribbon_2	PF13240.1	gi|297527526|ref|YP_003669550.1|	-	0.00045	19.6	4.5	0.23	10.9	0.4	2.3	2	0	0	2	2	2	2	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|297527526|ref|YP_003669550.1|	-	0.001	18.6	0.3	0.0022	17.6	0.2	1.5	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
zf-ribbon_3	PF13248.1	gi|297527526|ref|YP_003669550.1|	-	0.0017	17.5	4.3	0.014	14.5	3.2	2.0	1	1	1	2	2	2	2	zinc-ribbon	domain
DZR	PF12773.2	gi|297527526|ref|YP_003669550.1|	-	0.0019	18.0	0.4	0.003	17.3	0.3	1.4	1	0	0	1	1	1	1	Double	zinc	ribbon
zf-C4_Topoisom	PF01396.14	gi|297527526|ref|YP_003669550.1|	-	0.0034	16.8	3.2	0.005	16.3	2.2	1.3	1	0	0	1	1	1	1	Topoisomerase	DNA	binding	C4	zinc	finger
zf-TFIIB	PF13453.1	gi|297527526|ref|YP_003669550.1|	-	0.0049	16.0	1.0	0.0085	15.2	0.7	1.4	1	0	0	1	1	1	1	Transcription	factor	zinc-finger
Nudix_N_2	PF14803.1	gi|297527526|ref|YP_003669550.1|	-	0.0091	15.6	1.0	0.15	11.7	0.1	2.2	2	0	0	2	2	2	1	Nudix	N-terminal
Lar_restr_allev	PF14354.1	gi|297527526|ref|YP_003669550.1|	-	0.012	15.8	0.1	0.018	15.3	0.1	1.4	1	0	0	1	1	1	0	Restriction	alleviation	protein	Lar
IBR	PF01485.16	gi|297527526|ref|YP_003669550.1|	-	0.018	14.9	0.3	0.029	14.2	0.2	1.3	1	0	0	1	1	1	0	IBR	domain
DUF2387	PF09526.5	gi|297527526|ref|YP_003669550.1|	-	0.029	14.2	0.4	0.048	13.5	0.3	1.5	1	1	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
zf-FPG_IleRS	PF06827.9	gi|297527526|ref|YP_003669550.1|	-	0.039	13.5	1.8	1.2	8.7	0.1	2.3	2	0	0	2	2	2	0	Zinc	finger	found	in	FPG	and	IleRS
Zn_ribbon_recom	PF13408.1	gi|297527526|ref|YP_003669550.1|	-	0.051	13.8	4.7	0.15	12.3	3.3	1.9	1	1	0	1	1	1	0	Recombinase	zinc	beta	ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|297527526|ref|YP_003669550.1|	-	0.086	12.1	1.8	0.26	10.6	1.2	1.8	1	1	0	1	1	1	0	TFIIB	zinc-binding
YhfH	PF14149.1	gi|297527526|ref|YP_003669550.1|	-	0.16	11.7	0.9	5	6.9	0.0	2.5	2	0	0	2	2	2	0	YhfH-like	protein
UPF0547	PF10571.4	gi|297527526|ref|YP_003669550.1|	-	0.16	11.6	3.7	3	7.5	0.5	2.3	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zinc_ribbon_5	PF13719.1	gi|297527526|ref|YP_003669550.1|	-	0.24	10.9	2.1	1.1	8.8	0.0	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-IS66	PF13005.2	gi|297527526|ref|YP_003669550.1|	-	0.27	11.2	1.4	1.1	9.3	0.1	2.3	3	0	0	3	3	2	0	zinc-finger	binding	domain	of	transposase	IS66
Mu-like_Com	PF10122.4	gi|297527526|ref|YP_003669550.1|	-	0.27	10.3	2.7	2.8	7.0	0.0	2.4	2	0	0	2	2	2	0	Mu-like	prophage	protein	Com
zinc_ribbon_4	PF13717.1	gi|297527526|ref|YP_003669550.1|	-	0.48	10.1	2.7	1.6	8.5	0.1	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-ISL3	PF14690.1	gi|297527526|ref|YP_003669550.1|	-	0.8	9.7	5.4	2.2	8.3	0.3	2.3	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
Rubredoxin	PF00301.15	gi|297527526|ref|YP_003669550.1|	-	0.83	9.5	3.2	5.4	6.9	0.1	2.3	2	0	0	2	2	2	0	Rubredoxin
Auto_anti-p27	PF06677.7	gi|297527526|ref|YP_003669550.1|	-	1.9	8.3	5.0	5.7	6.7	3.6	1.7	1	1	1	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
ABC_tran	PF00005.22	gi|297527527|ref|YP_003669551.1|	-	1.2e-42	145.4	0.0	1.4e-21	77.2	0.0	2.5	2	0	0	2	2	2	2	ABC	transporter
AAA_21	PF13304.1	gi|297527527|ref|YP_003669551.1|	-	1.1e-17	64.9	2.8	7.7e-05	22.7	0.5	4.2	3	1	0	3	3	3	3	AAA	domain
SMC_N	PF02463.14	gi|297527527|ref|YP_003669551.1|	-	2e-14	53.3	1.1	1.7e-05	24.1	0.0	3.3	3	0	0	3	3	3	3	RecF/RecN/SMC	N	terminal	domain
RLI	PF04068.10	gi|297527527|ref|YP_003669551.1|	-	2.8e-12	45.9	4.9	7.7e-12	44.5	3.4	1.8	1	0	0	1	1	1	1	Possible	Fer4-like	domain	in	RNase	L	inhibitor,	RLI
Fer4	PF00037.22	gi|297527527|ref|YP_003669551.1|	-	5.1e-08	32.1	5.8	5.1e-08	32.1	4.0	2.6	3	0	0	3	3	2	1	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|297527527|ref|YP_003669551.1|	-	1.2e-06	28.1	14.8	6.8e-06	25.7	3.3	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|297527527|ref|YP_003669551.1|	-	1.8e-06	28.2	18.0	0.00015	22.0	5.8	1.8	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
AAA_23	PF13476.1	gi|297527527|ref|YP_003669551.1|	-	7.2e-06	26.4	0.8	0.095	13.0	0.0	2.4	2	0	0	2	2	2	2	AAA	domain
AAA_29	PF13555.1	gi|297527527|ref|YP_003669551.1|	-	2.3e-05	23.8	0.3	0.028	13.9	0.0	2.4	2	0	0	2	2	2	1	P-loop	containing	region	of	AAA	domain
Fer4_21	PF14697.1	gi|297527527|ref|YP_003669551.1|	-	2.6e-05	23.9	9.4	5.8e-05	22.8	6.5	1.6	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
AAA_17	PF13207.1	gi|297527527|ref|YP_003669551.1|	-	4.7e-05	24.1	4.2	0.053	14.3	0.1	2.9	2	2	0	2	2	2	2	AAA	domain
Fer4_16	PF13484.1	gi|297527527|ref|YP_003669551.1|	-	0.00017	22.2	2.4	0.0021	18.7	0.0	2.3	2	0	0	2	2	2	1	4Fe-4S	double	cluster	binding	domain
Fer4_2	PF12797.2	gi|297527527|ref|YP_003669551.1|	-	0.00018	21.1	3.4	0.00018	21.1	2.3	2.4	2	0	0	2	2	2	1	4Fe-4S	binding	domain
AAA_15	PF13175.1	gi|297527527|ref|YP_003669551.1|	-	0.00019	20.6	0.4	1.4	7.8	0.0	3.4	4	0	0	4	4	4	1	AAA	ATPase	domain
AAA_16	PF13191.1	gi|297527527|ref|YP_003669551.1|	-	0.00022	21.2	1.1	0.1	12.5	0.0	3.0	2	2	0	2	2	2	1	AAA	ATPase	domain
SbcCD_C	PF13558.1	gi|297527527|ref|YP_003669551.1|	-	0.0005	19.9	0.5	1.4	8.9	0.0	3.4	2	2	0	2	2	2	1	Putative	exonuclease	SbcCD,	C	subunit
AAA_22	PF13401.1	gi|297527527|ref|YP_003669551.1|	-	0.00054	20.1	2.9	0.52	10.4	0.0	3.4	3	1	0	3	3	2	2	AAA	domain
MobB	PF03205.9	gi|297527527|ref|YP_003669551.1|	-	0.00062	19.4	3.3	0.34	10.6	0.0	3.2	3	0	0	3	3	3	2	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Fer4_10	PF13237.1	gi|297527527|ref|YP_003669551.1|	-	0.001	18.7	11.2	0.0013	18.4	1.2	2.2	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
SRP54	PF00448.17	gi|297527527|ref|YP_003669551.1|	-	0.0018	17.7	0.1	1.5	8.1	0.0	2.4	2	0	0	2	2	2	1	SRP54-type	protein,	GTPase	domain
AAA	PF00004.24	gi|297527527|ref|YP_003669551.1|	-	0.0035	17.5	0.0	1.3	9.2	0.0	2.9	2	0	0	2	2	2	1	ATPase	family	associated	with	various	cellular	activities	(AAA)
AAA_33	PF13671.1	gi|297527527|ref|YP_003669551.1|	-	0.004	17.0	0.0	1.2	9.0	0.0	2.7	2	0	0	2	2	2	1	AAA	domain
Rad17	PF03215.10	gi|297527527|ref|YP_003669551.1|	-	0.0053	15.4	0.4	1.8	7.1	0.0	2.8	3	0	0	3	3	3	1	Rad17	cell	cycle	checkpoint	protein
Fer4_3	PF12798.2	gi|297527527|ref|YP_003669551.1|	-	0.0059	17.0	4.4	0.0059	17.0	3.1	2.3	2	0	0	2	2	2	1	4Fe-4S	binding	domain
Fer4_9	PF13187.1	gi|297527527|ref|YP_003669551.1|	-	0.0076	16.4	9.4	0.0082	16.3	1.9	1.9	1	1	1	2	2	2	2	4Fe-4S	dicluster	domain
AAA_25	PF13481.1	gi|297527527|ref|YP_003669551.1|	-	0.011	15.1	0.6	0.79	9.0	0.0	3.0	4	0	0	4	4	3	0	AAA	domain
Mg_chelatase	PF01078.16	gi|297527527|ref|YP_003669551.1|	-	0.014	14.5	0.3	2.9	6.9	0.0	3.0	4	0	0	4	4	4	0	Magnesium	chelatase,	subunit	ChlI
AAA_18	PF13238.1	gi|297527527|ref|YP_003669551.1|	-	0.016	15.5	2.4	2.4	8.4	0.5	3.1	2	1	0	2	2	2	0	AAA	domain
DUF258	PF03193.11	gi|297527527|ref|YP_003669551.1|	-	0.018	14.2	0.5	3.1	6.9	0.0	3.2	4	0	0	4	4	3	0	Protein	of	unknown	function,	DUF258
AAA_24	PF13479.1	gi|297527527|ref|YP_003669551.1|	-	0.026	14.1	1.1	0.73	9.3	0.0	2.5	2	0	0	2	2	2	0	AAA	domain
AAA_19	PF13245.1	gi|297527527|ref|YP_003669551.1|	-	0.028	14.1	0.2	3.5	7.4	0.0	2.6	2	0	0	2	2	2	0	Part	of	AAA	domain
Fer4_8	PF13183.1	gi|297527527|ref|YP_003669551.1|	-	0.032	14.2	4.9	0.088	12.8	3.5	1.5	1	1	0	1	1	1	0	4Fe-4S	dicluster	domain
Thymidylate_kin	PF02223.12	gi|297527527|ref|YP_003669551.1|	-	0.032	13.6	0.4	13	5.1	0.0	3.1	3	0	0	3	3	3	0	Thymidylate	kinase
AAA_30	PF13604.1	gi|297527527|ref|YP_003669551.1|	-	0.034	13.7	0.1	6.2	6.3	0.1	2.4	2	0	0	2	2	2	0	AAA	domain
ATP_bind_1	PF03029.12	gi|297527527|ref|YP_003669551.1|	-	0.037	13.5	0.3	7.6	6.0	0.0	2.9	3	0	0	3	3	3	0	Conserved	hypothetical	ATP	binding	protein
AAA_14	PF13173.1	gi|297527527|ref|YP_003669551.1|	-	0.039	13.8	2.1	2.3	8.1	0.1	3.2	3	1	0	3	3	2	0	AAA	domain
T2SE	PF00437.15	gi|297527527|ref|YP_003669551.1|	-	0.04	12.8	0.0	2.7	6.7	0.0	2.3	2	0	0	2	2	2	0	Type	II/IV	secretion	system	protein
Ribophorin_I	PF04597.9	gi|297527527|ref|YP_003669551.1|	-	0.042	12.3	0.8	4.2	5.7	0.0	2.2	2	0	0	2	2	2	0	Ribophorin	I
Miro	PF08477.8	gi|297527527|ref|YP_003669551.1|	-	0.046	14.2	0.1	12	6.3	0.0	2.7	2	0	0	2	2	2	0	Miro-like	protein
AAA_10	PF12846.2	gi|297527527|ref|YP_003669551.1|	-	0.047	13.1	1.7	6.1	6.1	0.0	3.0	4	0	0	4	4	3	0	AAA-like	domain
AAA_13	PF13166.1	gi|297527527|ref|YP_003669551.1|	-	0.05	12.0	0.0	1.7	6.9	0.0	2.3	2	0	0	2	2	2	0	AAA	domain
NACHT	PF05729.7	gi|297527527|ref|YP_003669551.1|	-	0.077	12.6	2.5	2.9	7.5	0.1	2.5	2	0	0	2	2	2	0	NACHT	domain
NB-ARC	PF00931.17	gi|297527527|ref|YP_003669551.1|	-	0.13	11.0	2.1	8	5.2	0.2	2.5	2	0	0	2	2	2	0	NB-ARC	domain
RNA_helicase	PF00910.17	gi|297527527|ref|YP_003669551.1|	-	0.17	12.0	0.1	8.9	6.5	0.0	2.5	2	0	0	2	2	2	0	RNA	helicase
Fer4_17	PF13534.1	gi|297527527|ref|YP_003669551.1|	-	0.19	12.0	6.3	0.17	12.2	1.0	2.2	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
ArgK	PF03308.11	gi|297527527|ref|YP_003669551.1|	-	0.22	10.2	1.1	3.8	6.2	0.1	2.2	2	0	0	2	2	2	0	ArgK	protein
AAA_28	PF13521.1	gi|297527527|ref|YP_003669551.1|	-	0.27	11.1	2.5	24	4.8	0.1	3.4	4	0	0	4	4	3	0	AAA	domain
Fer4_4	PF12800.2	gi|297527527|ref|YP_003669551.1|	-	0.44	11.0	12.6	0.079	13.3	2.0	2.3	2	0	0	2	2	2	0	4Fe-4S	binding	domain
NTPase_1	PF03266.10	gi|297527527|ref|YP_003669551.1|	-	1.6	8.3	7.5	6.1	6.5	0.1	3.4	4	0	0	4	4	4	0	NTPase
Fer4_18	PF13746.1	gi|297527527|ref|YP_003669551.1|	-	2.2	8.7	10.2	0.23	11.8	2.6	2.2	1	1	1	2	2	2	0	4Fe-4S	dicluster	domain
Fer4_15	PF13459.1	gi|297527527|ref|YP_003669551.1|	-	7.6	7.1	8.8	1.3	9.5	2.5	2.2	1	1	1	2	2	2	0	4Fe-4S	single	cluster	domain
FBPase_3	PF01950.11	gi|297527528|ref|YP_003669552.1|	-	3.5e-188	625.0	0.0	4e-188	624.8	0.0	1.0	1	0	0	1	1	1	1	Fructose-1,6-bisphosphatase
TIM	PF00121.13	gi|297527529|ref|YP_003669553.1|	-	7.9e-35	120.0	0.1	3.1e-33	114.8	0.0	2.0	1	1	0	1	1	1	1	Triosephosphate	isomerase
Trp_syntA	PF00290.15	gi|297527529|ref|YP_003669553.1|	-	1.3e-05	23.8	0.3	0.001	17.6	0.1	2.5	2	0	0	2	2	2	2	Tryptophan	synthase	alpha	chain
ThiG	PF05690.9	gi|297527529|ref|YP_003669553.1|	-	2.5e-05	23.4	0.5	4e-05	22.8	0.2	1.5	2	0	0	2	2	2	1	Thiazole	biosynthesis	protein	ThiG
IGPS	PF00218.16	gi|297527529|ref|YP_003669553.1|	-	5e-05	22.4	0.1	0.00011	21.4	0.0	1.5	1	1	0	1	1	1	1	Indole-3-glycerol	phosphate	synthase
His_biosynth	PF00977.16	gi|297527529|ref|YP_003669553.1|	-	0.0013	18.0	0.2	0.083	12.1	0.1	2.3	2	0	0	2	2	2	1	Histidine	biosynthesis	protein
FMN_dh	PF01070.13	gi|297527529|ref|YP_003669553.1|	-	0.0065	15.3	0.8	0.017	14.0	0.3	1.8	2	0	0	2	2	2	1	FMN-dependent	dehydrogenase
NMO	PF03060.10	gi|297527529|ref|YP_003669553.1|	-	0.0088	15.2	0.2	0.012	14.7	0.2	1.2	1	0	0	1	1	1	1	Nitronate	monooxygenase
PcrB	PF01884.12	gi|297527529|ref|YP_003669553.1|	-	0.05	12.8	0.5	0.14	11.4	0.2	1.7	2	0	0	2	2	2	0	PcrB	family
CutC	PF03932.9	gi|297527529|ref|YP_003669553.1|	-	0.073	12.3	0.2	0.12	11.5	0.1	1.4	1	0	0	1	1	1	0	CutC	family
PK	PF00224.16	gi|297527530|ref|YP_003669554.1|	-	1.6e-92	309.7	2.4	2e-92	309.4	1.7	1.1	1	0	0	1	1	1	1	Pyruvate	kinase,	barrel	domain
PK_C	PF02887.11	gi|297527530|ref|YP_003669554.1|	-	1.3e-06	27.8	0.0	3.1e-06	26.7	0.0	1.6	1	0	0	1	1	1	1	Pyruvate	kinase,	alpha/beta	domain
HpcH_HpaI	PF03328.9	gi|297527530|ref|YP_003669554.1|	-	0.0003	19.7	0.1	0.00052	18.9	0.1	1.3	1	0	0	1	1	1	1	HpcH/HpaI	aldolase/citrate	lyase	family
Na_K-ATPase	PF00287.13	gi|297527530|ref|YP_003669554.1|	-	0.068	11.9	0.0	0.26	10.0	0.0	1.8	2	0	0	2	2	2	0	Sodium	/	potassium	ATPase	beta	chain
DUF4131	PF13567.1	gi|297527531|ref|YP_003669555.1|	-	0.055	12.8	0.4	0.061	12.7	0.3	1.1	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4131)
Ndc1_Nup	PF09531.5	gi|297527531|ref|YP_003669555.1|	-	0.23	9.8	1.2	0.26	9.6	0.9	1.0	1	0	0	1	1	1	0	Nucleoporin	protein	Ndc1-Nup
PIG-P	PF08510.7	gi|297527531|ref|YP_003669555.1|	-	1.1	8.9	4.2	4.5	6.9	2.9	1.8	1	1	0	1	1	1	0	PIG-P
DUF3687	PF12459.3	gi|297527531|ref|YP_003669555.1|	-	1.8	7.8	8.6	0.34	10.1	0.7	2.2	2	0	0	2	2	2	0	D-Ala-teichoic	acid	biosynthesis	protein
DUF485	PF04341.7	gi|297527531|ref|YP_003669555.1|	-	2	8.1	8.4	11	5.8	0.8	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function,	DUF485
CcoS	PF03597.10	gi|297527531|ref|YP_003669555.1|	-	2.2	7.7	8.5	0.49	9.9	0.9	2.3	2	0	0	2	2	2	0	Cytochrome	oxidase	maturation	protein	cbb3-type
PspC	PF04024.7	gi|297527531|ref|YP_003669555.1|	-	5.3	6.5	7.2	11	5.5	0.2	2.1	2	0	0	2	2	2	0	PspC	domain
DUF1805	PF08827.6	gi|297527532|ref|YP_003669556.1|	-	8e-25	86.4	0.3	1.1e-24	85.9	0.2	1.2	1	0	0	1	1	1	1	Domain	of	unknown	function	(DUF1805)
DUF131	PF01998.12	gi|297527533|ref|YP_003669557.1|	-	1.4e-15	56.3	14.0	1.4e-15	56.3	9.7	1.9	1	1	1	2	2	2	1	Protein	of	unknown	function	DUF131
DUF4064	PF13273.1	gi|297527533|ref|YP_003669557.1|	-	0.00078	19.5	8.7	0.0011	19.0	6.0	1.1	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF4064)
Fig1	PF12351.3	gi|297527533|ref|YP_003669557.1|	-	0.23	11.3	3.0	0.32	10.8	2.1	1.2	1	0	0	1	1	1	0	Ca2+	regulator	and	membrane	fusion	protein	Fig1
CcmH	PF03918.9	gi|297527533|ref|YP_003669557.1|	-	0.4	9.6	0.0	0.4	9.6	0.0	1.9	2	0	0	2	2	2	0	Cytochrome	C	biogenesis	protein
RDD	PF06271.7	gi|297527533|ref|YP_003669557.1|	-	0.66	9.8	9.1	1.3	8.9	6.3	1.4	1	1	0	1	1	1	0	RDD	family
Baculo_11_kDa	PF06143.6	gi|297527533|ref|YP_003669557.1|	-	1	8.7	4.2	35	3.8	0.0	2.1	2	0	0	2	2	2	0	Baculovirus	11	kDa	family
DUF973	PF06157.6	gi|297527533|ref|YP_003669557.1|	-	3.8	6.3	18.6	13	4.6	12.9	1.7	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF973)
Bunya_G2	PF03563.8	gi|297527533|ref|YP_003669557.1|	-	5	5.9	6.3	6.6	5.5	4.4	1.2	1	0	0	1	1	1	0	Bunyavirus	glycoprotein	G2
DUF131	PF01998.12	gi|297527534|ref|YP_003669558.1|	-	0.001	18.4	13.6	0.001	18.4	9.4	2.0	1	1	1	2	2	2	1	Protein	of	unknown	function	DUF131
Syndecan	PF01034.15	gi|297527534|ref|YP_003669558.1|	-	0.23	11.1	0.3	0.23	11.1	0.2	2.0	2	0	0	2	2	2	0	Syndecan	domain
AA_permease_2	PF13520.1	gi|297527534|ref|YP_003669558.1|	-	0.45	9.0	15.1	0.55	8.6	10.5	1.0	1	0	0	1	1	1	0	Amino	acid	permease
EmrE	PF13536.1	gi|297527534|ref|YP_003669558.1|	-	0.46	10.6	14.1	0.86	9.8	9.8	1.4	1	1	0	1	1	1	0	Multidrug	resistance	efflux	transporter
GPI2	PF06432.6	gi|297527534|ref|YP_003669558.1|	-	1	8.6	8.1	1.3	8.3	5.6	1.1	1	0	0	1	1	1	0	Phosphatidylinositol	N-acetylglucosaminyltransferase
DUF202	PF02656.10	gi|297527534|ref|YP_003669558.1|	-	1.2	9.3	9.1	8.5	6.6	6.3	2.1	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF202)
DUF3278	PF11683.3	gi|297527534|ref|YP_003669558.1|	-	2.6	8.0	7.9	0.54	10.2	1.8	1.9	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF3278)
DUF805	PF05656.9	gi|297527534|ref|YP_003669558.1|	-	4.8	7.0	12.7	51	3.7	8.8	2.0	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF805)
DUF872	PF05915.7	gi|297527534|ref|YP_003669558.1|	-	5.6	6.8	8.1	0.58	10.0	1.3	1.9	1	1	1	2	2	2	0	Eukaryotic	protein	of	unknown	function	(DUF872)
YtpI	PF14007.1	gi|297527534|ref|YP_003669558.1|	-	6.4	6.7	10.1	0.72	9.8	1.3	2.1	1	1	1	2	2	2	0	YtpI-like	protein
ERGIC_N	PF13850.1	gi|297527534|ref|YP_003669558.1|	-	7.5	6.5	6.0	12	5.9	0.7	2.3	1	1	1	2	2	2	0	Endoplasmic	Reticulum-Golgi	Intermediate	Compartment	(ERGIC)
Sipho_Gp157	PF05565.6	gi|297527535|ref|YP_003669559.1|	-	0.0038	16.8	1.1	0.0041	16.7	0.8	1.0	1	0	0	1	1	1	1	Siphovirus	Gp157
IncA	PF04156.9	gi|297527535|ref|YP_003669559.1|	-	0.027	14.0	0.4	0.031	13.8	0.3	1.0	1	0	0	1	1	1	0	IncA	protein
DUF4283	PF14111.1	gi|297527535|ref|YP_003669559.1|	-	0.047	12.7	0.1	0.051	12.6	0.1	1.0	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4283)
Spectrin	PF00435.16	gi|297527535|ref|YP_003669559.1|	-	0.048	13.9	0.7	0.055	13.7	0.5	1.0	1	0	0	1	1	1	0	Spectrin	repeat
XhlA	PF10779.4	gi|297527535|ref|YP_003669559.1|	-	0.049	13.5	0.8	0.058	13.3	0.5	1.2	1	0	0	1	1	1	0	Haemolysin	XhlA
Ax_dynein_light	PF10211.4	gi|297527535|ref|YP_003669559.1|	-	0.071	12.9	1.9	0.076	12.8	1.3	1.0	1	0	0	1	1	1	0	Axonemal	dynein	light	chain
Prefoldin_2	PF01920.15	gi|297527535|ref|YP_003669559.1|	-	0.076	12.7	3.8	0.099	12.4	2.6	1.1	1	0	0	1	1	1	0	Prefoldin	subunit
DivIC	PF04977.10	gi|297527535|ref|YP_003669559.1|	-	0.078	12.4	0.7	0.098	12.1	0.5	1.2	1	0	0	1	1	1	0	Septum	formation	initiator
bZIP_1	PF00170.16	gi|297527535|ref|YP_003669559.1|	-	0.09	12.7	3.6	0.11	12.4	2.5	1.1	1	0	0	1	1	1	0	bZIP	transcription	factor
DUF4140	PF13600.1	gi|297527535|ref|YP_003669559.1|	-	0.098	13.1	0.1	0.11	12.9	0.1	1.1	1	0	0	1	1	1	0	N-terminal	domain	of	unknown	function	(DUF4140)
zf-TFIIB	PF13453.1	gi|297527536|ref|YP_003669560.1|	-	0.00036	19.6	0.8	0.077	12.1	0.1	2.2	2	0	0	2	2	2	2	Transcription	factor	zinc-finger
TF_Zn_Ribbon	PF08271.7	gi|297527536|ref|YP_003669560.1|	-	0.0066	15.7	2.4	0.99	8.7	0.1	2.3	2	0	0	2	2	2	2	TFIIB	zinc-binding
zf-C4_Topoisom	PF01396.14	gi|297527536|ref|YP_003669560.1|	-	0.013	15.0	4.9	0.066	12.7	0.7	2.2	2	0	0	2	2	2	0	Topoisomerase	DNA	binding	C4	zinc	finger
Spore_YhaL	PF14147.1	gi|297527536|ref|YP_003669560.1|	-	0.015	14.6	0.1	0.015	14.6	0.1	1.5	2	0	0	2	2	1	0	Sporulation	protein	YhaL
zinc_ribbon_2	PF13240.1	gi|297527536|ref|YP_003669560.1|	-	0.018	14.4	7.0	0.13	11.8	0.8	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
DNA_RNApol_7kD	PF03604.8	gi|297527536|ref|YP_003669560.1|	-	0.026	13.9	1.1	0.83	9.1	0.1	2.3	2	0	0	2	2	2	0	DNA	directed	RNA	polymerase,	7	kDa	subunit
zf-C3HC4_3	PF13920.1	gi|297527536|ref|YP_003669560.1|	-	0.032	13.9	0.6	0.049	13.3	0.4	1.3	1	0	0	1	1	1	0	Zinc	finger,	C3HC4	type	(RING	finger)
DiS_P_DiS	PF06750.8	gi|297527536|ref|YP_003669560.1|	-	0.036	13.8	0.7	0.23	11.2	0.5	2.0	1	1	0	1	1	1	0	Bacterial	Peptidase	A24	N-terminal	domain
DUF2387	PF09526.5	gi|297527536|ref|YP_003669560.1|	-	0.037	13.9	4.7	0.31	10.9	0.2	2.2	1	1	1	2	2	2	0	Probable	metal-binding	protein	(DUF2387)
DUF1451	PF07295.6	gi|297527536|ref|YP_003669560.1|	-	0.038	13.7	0.6	0.82	9.4	0.0	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF1451)
RNA_POL_M_15KD	PF02150.11	gi|297527536|ref|YP_003669560.1|	-	0.046	13.4	5.9	0.29	10.8	0.5	2.2	2	0	0	2	2	2	0	RNA	polymerases	M/15	Kd	subunit
SIR2	PF02146.12	gi|297527536|ref|YP_003669560.1|	-	0.064	12.9	0.4	0.079	12.6	0.3	1.1	1	0	0	1	1	1	0	Sir2	family
zf-ISL3	PF14690.1	gi|297527536|ref|YP_003669560.1|	-	0.1	12.6	1.2	3.7	7.6	0.1	2.2	2	0	0	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
HypA	PF01155.14	gi|297527536|ref|YP_003669560.1|	-	0.11	12.2	0.2	0.15	11.7	0.1	1.2	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
Nudix_N_2	PF14803.1	gi|297527536|ref|YP_003669560.1|	-	0.12	12.1	0.3	4	7.2	0.0	2.2	2	0	0	2	2	2	0	Nudix	N-terminal
DZR	PF12773.2	gi|297527536|ref|YP_003669560.1|	-	0.14	12.0	1.9	0.7	9.7	1.2	1.8	1	1	1	2	2	2	0	Double	zinc	ribbon
zf-ribbon_3	PF13248.1	gi|297527536|ref|YP_003669560.1|	-	0.15	11.2	2.8	3.5	6.9	0.1	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
Ogr_Delta	PF04606.7	gi|297527536|ref|YP_003669560.1|	-	0.18	11.4	2.7	0.54	9.9	0.2	2.1	2	0	0	2	2	2	0	Ogr/Delta-like	zinc	finger
zinc_ribbon_4	PF13717.1	gi|297527536|ref|YP_003669560.1|	-	0.18	11.4	1.8	13	5.5	0.1	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
PhnA_Zn_Ribbon	PF08274.7	gi|297527536|ref|YP_003669560.1|	-	0.2	11.4	2.9	0.69	9.7	0.3	2.1	2	0	0	2	2	2	0	PhnA	Zinc-Ribbon
zinc_ribbon_5	PF13719.1	gi|297527536|ref|YP_003669560.1|	-	0.27	10.8	2.2	12	5.5	0.2	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
Ribosomal_L44	PF00935.14	gi|297527536|ref|YP_003669560.1|	-	0.75	9.8	4.3	0.21	11.5	0.7	1.7	2	0	0	2	2	2	0	Ribosomal	protein	L44
Zn-ribbon_8	PF09723.5	gi|297527536|ref|YP_003669560.1|	-	0.9	9.5	5.3	11	6.0	3.7	2.3	1	1	0	1	1	1	0	Zinc	ribbon	domain
TFIIS_C	PF01096.13	gi|297527536|ref|YP_003669560.1|	-	1	9.0	4.0	11	5.7	0.1	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
YhfH	PF14149.1	gi|297527536|ref|YP_003669560.1|	-	1.7	8.5	5.9	0.32	10.8	0.5	2.2	2	0	0	2	2	2	0	YhfH-like	protein
zf-H2C2_2	PF13465.1	gi|297527536|ref|YP_003669560.1|	-	8.5	6.8	7.9	13	6.2	1.1	2.3	1	1	1	2	2	2	0	Zinc-finger	double	domain
DUF1512	PF07431.7	gi|297527537|ref|YP_003669561.1|	-	6.3e-120	400.1	2.3	7.3e-120	399.9	1.6	1.0	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF1512)
YMF19	PF02326.10	gi|297527537|ref|YP_003669561.1|	-	0.18	12.4	4.1	0.18	12.4	1.3	2.1	1	1	1	2	2	2	0	Plant	ATP	synthase	F0
Peptidase_M24	PF00557.19	gi|297527538|ref|YP_003669562.1|	-	1.2e-43	149.1	0.0	1.5e-43	148.8	0.0	1.1	1	0	0	1	1	1	1	Metallopeptidase	family	M24
Lactamase_B_3	PF13483.1	gi|297527539|ref|YP_003669563.1|	-	6.9e-22	77.8	0.0	9.6e-22	77.4	0.0	1.2	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B_2	PF12706.2	gi|297527539|ref|YP_003669563.1|	-	4e-20	72.1	0.0	5.2e-20	71.8	0.0	1.1	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
Lactamase_B	PF00753.22	gi|297527539|ref|YP_003669563.1|	-	5.9e-13	48.8	1.9	1e-12	48.0	1.3	1.5	1	1	0	1	1	1	1	Metallo-beta-lactamase	superfamily
tRNA-synt_1b	PF00579.20	gi|297527541|ref|YP_003669565.1|	-	7.7e-51	172.9	0.0	6e-50	170.0	0.0	1.9	1	1	0	1	1	1	1	tRNA	synthetases	class	I	(W	and	Y)
Toprim_4	PF13662.1	gi|297527542|ref|YP_003669566.1|	-	2.6e-11	43.3	0.3	1.1e-10	41.3	0.0	2.2	1	1	1	2	2	2	1	Toprim	domain
Toprim	PF01751.17	gi|297527542|ref|YP_003669566.1|	-	1e-06	28.6	0.3	9.2e-06	25.5	0.1	2.7	2	1	0	2	2	2	1	Toprim	domain
Toprim_2	PF13155.1	gi|297527542|ref|YP_003669566.1|	-	0.0018	18.5	0.0	0.0076	16.5	0.0	2.1	1	1	1	2	2	2	1	Toprim-like
Toprim_3	PF13362.1	gi|297527542|ref|YP_003669566.1|	-	0.0048	17.1	0.0	0.0048	17.1	0.0	2.4	4	0	0	4	4	4	1	Toprim	domain
NCD2	PF04905.8	gi|297527542|ref|YP_003669566.1|	-	0.086	12.6	3.1	0.15	11.8	0.1	2.3	2	0	0	2	2	2	0	NAB	conserved	region	2	(NCD2)
Rota_NSP4	PF01452.11	gi|297527542|ref|YP_003669566.1|	-	0.76	9.0	4.4	1	8.6	0.3	2.5	2	0	0	2	2	2	0	Rotavirus	non	structural	protein
Ribosomal_L12	PF00542.14	gi|297527542|ref|YP_003669566.1|	-	8.7	6.4	12.3	1.3	9.0	1.4	3.2	2	1	0	2	2	2	0	Ribosomal	protein	L7/L12	C-terminal	domain
DNA_pol_B	PF00136.16	gi|297527543|ref|YP_003669567.1|	-	1.6e-98	330.5	1.4	2e-98	330.2	0.2	1.7	2	0	0	2	2	2	1	DNA	polymerase	family	B
DNA_pol_B_exo1	PF03104.14	gi|297527543|ref|YP_003669567.1|	-	2.5e-36	125.1	1.4	2.7e-35	121.7	1.0	2.2	1	1	0	1	1	1	1	DNA	polymerase	family	B,	exonuclease	domain
RNase_H_2	PF13482.1	gi|297527543|ref|YP_003669567.1|	-	5.3e-11	42.6	0.1	1.2e-10	41.4	0.0	1.7	1	0	0	1	1	1	1	RNase_H	superfamily
DNA_pol_B_exo2	PF10108.4	gi|297527543|ref|YP_003669567.1|	-	0.00012	21.7	0.1	0.00023	20.7	0.0	1.4	1	0	0	1	1	1	1	Predicted	3'-5'	exonuclease	related	to	the	exonuclease	domain	of	PolB
eRF1_1	PF03463.10	gi|297527544|ref|YP_003669568.1|	-	3e-33	114.2	0.1	5.4e-33	113.3	0.0	1.4	1	0	0	1	1	1	1	eRF1	domain	1
eRF1_2	PF03464.10	gi|297527544|ref|YP_003669568.1|	-	1.3e-19	70.8	0.2	2.8e-19	69.7	0.1	1.6	1	0	0	1	1	1	1	eRF1	domain	2
eRF1_3	PF03465.10	gi|297527544|ref|YP_003669568.1|	-	2.9e-19	69.3	0.1	1e-18	67.6	0.0	2.0	2	1	0	2	2	2	1	eRF1	domain	3
Suf	PF05843.9	gi|297527544|ref|YP_003669568.1|	-	0.076	12.7	0.1	0.18	11.5	0.0	1.4	1	1	1	2	2	2	0	Suppressor	of	forked	protein	(Suf)
NTP_transf_2	PF01909.18	gi|297527545|ref|YP_003669569.1|	-	2.2e-08	34.2	0.5	6.5e-08	32.8	0.1	2.0	2	1	0	2	2	2	1	Nucleotidyltransferase	domain
HTH_24	PF13412.1	gi|297527545|ref|YP_003669569.1|	-	0.0028	16.9	0.3	0.19	11.1	0.0	2.5	2	0	0	2	2	2	2	Winged	helix-turn-helix	DNA-binding
HTH_AsnC-type	PF13404.1	gi|297527545|ref|YP_003669569.1|	-	0.14	11.6	1.3	0.36	10.4	0.0	2.1	2	0	0	2	2	2	0	AsnC-type	helix-turn-helix	domain
Peptidase_M50	PF02163.17	gi|297527546|ref|YP_003669570.1|	-	1.1e-23	83.1	1.4	1.1e-23	83.1	1.0	2.6	2	2	0	2	2	2	1	Peptidase	family	M50
PDZ	PF00595.19	gi|297527546|ref|YP_003669570.1|	-	0.00019	21.5	0.0	0.00042	20.4	0.0	1.5	1	0	0	1	1	1	1	PDZ	domain	(Also	known	as	DHR	or	GLGF)
PDZ_2	PF13180.1	gi|297527546|ref|YP_003669570.1|	-	0.0022	17.8	0.0	0.0042	16.9	0.0	1.4	1	0	0	1	1	1	1	PDZ	domain
DUF1129	PF06570.6	gi|297527546|ref|YP_003669570.1|	-	1.8	7.8	7.8	7.7	5.7	0.2	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1129)
E1-E2_ATPase	PF00122.15	gi|297527546|ref|YP_003669570.1|	-	8.1	5.4	6.5	47	2.9	4.5	2.3	1	1	0	1	1	1	0	E1-E2	ATPase
PALP	PF00291.20	gi|297527547|ref|YP_003669571.1|	-	9.3e-57	192.5	0.0	1.1e-56	192.3	0.0	1.0	1	0	0	1	1	1	1	Pyridoxal-phosphate	dependent	enzyme
zf-ribbon_3	PF13248.1	gi|297527547|ref|YP_003669571.1|	-	0.0065	15.6	2.4	1.8	7.8	0.2	2.3	2	0	0	2	2	2	2	zinc-ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|297527547|ref|YP_003669571.1|	-	0.018	14.3	0.9	0.61	9.4	0.1	2.8	3	0	0	3	3	3	0	TFIIB	zinc-binding
A2L_zn_ribbon	PF08792.5	gi|297527547|ref|YP_003669571.1|	-	0.018	14.4	1.2	0.14	11.6	0.1	2.3	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
zf-NADH-PPase	PF09297.6	gi|297527547|ref|YP_003669571.1|	-	0.071	12.6	1.6	1.1	8.8	0.0	2.3	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
Rubredoxin	PF00301.15	gi|297527547|ref|YP_003669571.1|	-	0.12	12.3	4.4	5.9	6.8	0.4	2.4	2	0	0	2	2	2	0	Rubredoxin
Ogr_Delta	PF04606.7	gi|297527547|ref|YP_003669571.1|	-	0.16	11.6	0.3	22	4.7	0.1	2.3	2	0	0	2	2	2	0	Ogr/Delta-like	zinc	finger
DNA_ligase_ZBD	PF03119.11	gi|297527547|ref|YP_003669571.1|	-	0.19	11.4	1.3	2.5	7.8	0.1	2.5	2	0	0	2	2	2	0	NAD-dependent	DNA	ligase	C4	zinc	finger	domain
zinc_ribbon_2	PF13240.1	gi|297527547|ref|YP_003669571.1|	-	0.19	11.2	6.3	3.7	7.1	0.2	2.4	2	0	0	2	2	2	0	zinc-ribbon	domain
DZR	PF12773.2	gi|297527547|ref|YP_003669571.1|	-	0.19	11.5	0.8	0.44	10.3	0.5	1.5	1	1	0	1	1	1	0	Double	zinc	ribbon
OrfB_Zn_ribbon	PF07282.6	gi|297527547|ref|YP_003669571.1|	-	0.21	11.2	2.0	0.32	10.6	0.5	2.0	2	0	0	2	2	2	0	Putative	transposase	DNA-binding	domain
zf-TFIIB	PF13453.1	gi|297527547|ref|YP_003669571.1|	-	0.25	10.5	1.8	3.9	6.7	0.0	2.4	2	0	0	2	2	2	0	Transcription	factor	zinc-finger
Auto_anti-p27	PF06677.7	gi|297527547|ref|YP_003669571.1|	-	0.33	10.7	1.2	18	5.1	0.1	2.5	2	0	0	2	2	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zf-ISL3	PF14690.1	gi|297527547|ref|YP_003669571.1|	-	0.41	10.7	4.6	4.4	7.4	0.2	2.4	1	1	1	2	2	2	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
zf-C2H2_4	PF13894.1	gi|297527547|ref|YP_003669571.1|	-	0.43	11.0	3.1	23	5.5	0.0	2.4	2	0	0	2	2	2	0	C2H2-type	zinc	finger
DUF4379	PF14311.1	gi|297527547|ref|YP_003669571.1|	-	1.2	9.0	6.9	6.1	6.7	0.3	2.3	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4379)
zf-RanBP	PF00641.13	gi|297527547|ref|YP_003669571.1|	-	1.2	8.3	5.7	7.4	5.7	0.6	2.2	2	0	0	2	2	2	0	Zn-finger	in	Ran	binding	protein	and	others
DUF1610	PF07754.6	gi|297527547|ref|YP_003669571.1|	-	7.4	6.7	8.0	4.6	7.4	1.3	2.5	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF1610)
Alg14	PF08660.6	gi|297527548|ref|YP_003669572.1|	-	1.6e-05	24.9	0.0	2.3e-05	24.4	0.0	1.2	1	0	0	1	1	1	1	Oligosaccharide	biosynthesis	protein	Alg14	like
Glyco_trans_1_3	PF13528.1	gi|297527548|ref|YP_003669572.1|	-	8.6e-05	21.8	0.0	0.00014	21.1	0.0	1.3	1	0	0	1	1	1	1	Glycosyl	transferase	family	1
Glyco_tran_28_C	PF04101.11	gi|297527548|ref|YP_003669572.1|	-	0.00027	20.6	0.0	0.00064	19.4	0.0	1.7	1	0	0	1	1	1	1	Glycosyltransferase	family	28	C-terminal	domain
Glyco_trans_4_4	PF13579.1	gi|297527548|ref|YP_003669572.1|	-	0.0044	17.1	0.0	0.0065	16.6	0.0	1.2	1	0	0	1	1	1	1	Glycosyl	transferase	4-like	domain
PALP	PF00291.20	gi|297527548|ref|YP_003669572.1|	-	0.02	14.1	0.0	0.035	13.3	0.0	1.5	2	0	0	2	2	2	0	Pyridoxal-phosphate	dependent	enzyme
PMT_2	PF13231.1	gi|297527550|ref|YP_003669574.1|	-	5.8e-11	42.5	19.5	5.8e-11	42.5	13.5	3.7	3	2	0	3	3	3	1	Dolichyl-phosphate-mannose-protein	mannosyltransferase
PMT	PF02366.13	gi|297527550|ref|YP_003669574.1|	-	1.3e-07	31.2	31.1	9.1e-07	28.4	13.3	3.0	2	2	1	3	3	3	2	Dolichyl-phosphate-mannose-protein	mannosyltransferase
tRNA_bind	PF01588.15	gi|297527551|ref|YP_003669575.1|	-	5.1e-07	29.4	0.0	9.2e-07	28.6	0.0	1.4	1	0	0	1	1	1	1	Putative	tRNA	binding	domain
RHH_1	PF01402.16	gi|297527552|ref|YP_003669576.1|	-	8.3e-08	31.8	0.2	1.1e-07	31.4	0.2	1.2	1	0	0	1	1	1	1	Ribbon-helix-helix	protein,	copG	family
RHH_2	PF03693.9	gi|297527552|ref|YP_003669576.1|	-	4.5e-05	23.5	0.0	4.7e-05	23.4	0.0	1.1	1	0	0	1	1	1	1	Uncharacterised	protein	family	(UPF0156)
DUF2191	PF09957.4	gi|297527552|ref|YP_003669576.1|	-	0.13	12.1	0.1	0.22	11.3	0.0	1.4	1	1	0	1	1	1	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2191)
ASCH	PF04266.9	gi|297527553|ref|YP_003669577.1|	-	0.015	15.6	0.1	0.022	15.1	0.0	1.3	1	0	0	1	1	1	0	ASCH	domain
GCD14	PF08704.5	gi|297527554|ref|YP_003669578.1|	-	4.7e-33	114.7	0.0	1.4e-31	109.9	0.0	2.0	1	1	1	2	2	2	1	tRNA	methyltransferase	complex	GCD14	subunit
Methyltransf_31	PF13847.1	gi|297527554|ref|YP_003669578.1|	-	1.7e-13	50.4	0.0	2.2e-13	50.0	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|297527554|ref|YP_003669578.1|	-	1e-10	41.4	0.0	1.6e-10	40.8	0.0	1.3	1	0	0	1	1	1	1	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
Methyltransf_18	PF12847.2	gi|297527554|ref|YP_003669578.1|	-	2.4e-09	37.7	0.0	3.7e-09	37.1	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Ubie_methyltran	PF01209.13	gi|297527554|ref|YP_003669578.1|	-	5.9e-07	28.8	0.0	8.4e-07	28.3	0.0	1.2	1	0	0	1	1	1	1	ubiE/COQ5	methyltransferase	family
Methyltransf_11	PF08241.7	gi|297527554|ref|YP_003669578.1|	-	9.3e-07	29.2	0.0	1.6e-06	28.4	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_26	PF13659.1	gi|297527554|ref|YP_003669578.1|	-	1.6e-06	28.1	0.0	2.4e-06	27.5	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_3	PF01596.12	gi|297527554|ref|YP_003669578.1|	-	4.1e-06	25.9	0.0	7.3e-06	25.1	0.0	1.4	1	0	0	1	1	1	1	O-methyltransferase
Methyltransf_24	PF13578.1	gi|297527554|ref|YP_003669578.1|	-	5.6e-06	27.1	0.0	1.5e-05	25.7	0.0	1.7	2	0	0	2	2	1	1	Methyltransferase	domain
Methyltransf_25	PF13649.1	gi|297527554|ref|YP_003669578.1|	-	8.8e-06	26.0	0.0	1.5e-05	25.2	0.0	1.4	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_12	PF08242.7	gi|297527554|ref|YP_003669578.1|	-	0.00014	22.2	0.0	0.00044	20.6	0.0	1.8	2	0	0	2	2	2	1	Methyltransferase	domain
MTS	PF05175.9	gi|297527554|ref|YP_003669578.1|	-	0.00054	19.3	0.0	0.00079	18.8	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_4	PF02390.12	gi|297527554|ref|YP_003669578.1|	-	0.00072	18.6	0.0	0.0011	18.0	0.0	1.2	1	0	0	1	1	1	1	Putative	methyltransferase
Methyltransf_23	PF13489.1	gi|297527554|ref|YP_003669578.1|	-	0.00092	18.9	0.0	0.0038	16.9	0.0	1.8	1	1	0	1	1	1	1	Methyltransferase	domain
Methyltransf_32	PF13679.1	gi|297527554|ref|YP_003669578.1|	-	0.001	18.7	0.0	0.0014	18.3	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|297527554|ref|YP_003669578.1|	-	0.0013	18.3	0.0	0.002	17.7	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
PrmA	PF06325.8	gi|297527554|ref|YP_003669578.1|	-	0.0023	17.1	0.0	0.0035	16.5	0.0	1.3	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_15	PF09445.5	gi|297527554|ref|YP_003669578.1|	-	0.0024	17.4	0.0	0.0051	16.3	0.0	1.7	2	0	0	2	2	2	1	RNA	cap	guanine-N2	methyltransferase
RrnaAD	PF00398.15	gi|297527554|ref|YP_003669578.1|	-	0.003	16.6	0.0	0.0048	15.9	0.0	1.2	1	0	0	1	1	1	1	Ribosomal	RNA	adenine	dimethylase
CmcI	PF04989.7	gi|297527554|ref|YP_003669578.1|	-	0.049	12.9	0.0	0.076	12.3	0.0	1.4	1	0	0	1	1	1	0	Cephalosporin	hydroxylase
GCD14_N	PF14801.1	gi|297527554|ref|YP_003669578.1|	-	0.061	12.9	0.0	0.11	12.0	0.0	1.4	1	0	0	1	1	1	0	tRNA	methyltransferase	complex	GCD14	subunit	N-term
rRNA_methylase	PF06962.7	gi|297527554|ref|YP_003669578.1|	-	0.12	12.1	0.0	1.1	8.9	0.0	2.1	2	0	0	2	2	2	0	Putative	rRNA	methylase
Gcd10p	PF04189.8	gi|297527554|ref|YP_003669578.1|	-	0.18	10.8	0.5	12	4.8	0.1	2.1	1	1	0	2	2	2	0	Gcd10p	family
DUF2129	PF09902.4	gi|297527554|ref|YP_003669578.1|	-	0.3	10.9	2.3	0.96	9.2	0.1	2.8	3	0	0	3	3	3	0	Uncharacterized	protein	conserved	in	bacteria	(DUF2129)
Methyltransf_18	PF12847.2	gi|297527555|ref|YP_003669579.1|	-	8.8e-13	48.8	0.0	1.1e-12	48.4	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_31	PF13847.1	gi|297527555|ref|YP_003669579.1|	-	4.9e-12	45.6	0.0	5.7e-12	45.4	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
PrmA	PF06325.8	gi|297527555|ref|YP_003669579.1|	-	1.6e-11	43.9	0.4	1.9e-11	43.6	0.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L11	methyltransferase	(PrmA)
Methyltransf_26	PF13659.1	gi|297527555|ref|YP_003669579.1|	-	7.9e-09	35.5	0.0	1e-08	35.2	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
UPF0020	PF01170.13	gi|297527555|ref|YP_003669579.1|	-	4.9e-08	32.7	0.0	7.3e-08	32.1	0.0	1.2	1	0	0	1	1	1	1	Putative	RNA	methylase	family	UPF0020
Methyltransf_25	PF13649.1	gi|297527555|ref|YP_003669579.1|	-	2.2e-07	31.1	0.0	2.9e-07	30.7	0.0	1.1	1	0	0	1	1	1	1	Methyltransferase	domain
MTS	PF05175.9	gi|297527555|ref|YP_003669579.1|	-	1.2e-06	27.9	0.0	1.5e-06	27.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	small	domain
Methyltransf_11	PF08241.7	gi|297527555|ref|YP_003669579.1|	-	1.4e-05	25.4	0.0	2e-05	24.9	0.0	1.3	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_15	PF09445.5	gi|297527555|ref|YP_003669579.1|	-	5.7e-05	22.7	0.0	6.5e-05	22.5	0.0	1.1	1	0	0	1	1	1	1	RNA	cap	guanine-N2	methyltransferase
Methyltransf_12	PF08242.7	gi|297527555|ref|YP_003669579.1|	-	6.2e-05	23.4	0.0	8.5e-05	22.9	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
Methyltransf_4	PF02390.12	gi|297527555|ref|YP_003669579.1|	-	6.9e-05	21.9	0.0	8.7e-05	21.6	0.0	1.1	1	0	0	1	1	1	1	Putative	methyltransferase
Met_10	PF02475.11	gi|297527555|ref|YP_003669579.1|	-	0.00019	21.0	0.2	0.00023	20.8	0.1	1.1	1	0	0	1	1	1	1	Met-10+	like-protein
DOT1	PF08123.8	gi|297527555|ref|YP_003669579.1|	-	0.00022	20.5	0.3	0.0013	18.0	0.2	2.2	1	1	0	1	1	1	1	Histone	methylation	protein	DOT1
CMAS	PF02353.15	gi|297527555|ref|YP_003669579.1|	-	0.00048	19.2	0.0	0.00057	19.0	0.0	1.1	1	0	0	1	1	1	1	Mycolic	acid	cyclopropane	synthetase
TehB	PF03848.9	gi|297527555|ref|YP_003669579.1|	-	0.00083	18.5	0.0	0.00095	18.3	0.0	1.1	1	0	0	1	1	1	1	Tellurite	resistance	protein	TehB
MetW	PF07021.7	gi|297527555|ref|YP_003669579.1|	-	0.0026	17.1	0.0	0.0033	16.8	0.0	1.2	1	0	0	1	1	1	1	Methionine	biosynthesis	protein	MetW
Methyltransf_23	PF13489.1	gi|297527555|ref|YP_003669579.1|	-	0.0045	16.7	0.0	0.0045	16.7	0.0	1.2	1	0	0	1	1	1	1	Methyltransferase	domain
PCMT	PF01135.14	gi|297527555|ref|YP_003669579.1|	-	0.011	15.3	0.0	0.012	15.0	0.0	1.2	1	0	0	1	1	1	0	Protein-L-isoaspartate(D-aspartate)	O-methyltransferase	(PCMT)
N6_Mtase	PF02384.11	gi|297527555|ref|YP_003669579.1|	-	0.028	13.5	0.0	0.033	13.2	0.0	1.2	1	0	0	1	1	1	0	N-6	DNA	Methylase
Methyltransf_32	PF13679.1	gi|297527555|ref|YP_003669579.1|	-	0.029	14.0	0.0	0.038	13.6	0.0	1.2	1	0	0	1	1	1	0	Methyltransferase	domain
N6_N4_Mtase	PF01555.13	gi|297527555|ref|YP_003669579.1|	-	0.045	13.2	0.0	0.068	12.6	0.0	1.2	1	0	0	1	1	1	0	DNA	methylase
Lum_binding	PF00677.12	gi|297527555|ref|YP_003669579.1|	-	0.05	13.5	0.2	0.075	12.9	0.1	1.3	1	0	0	1	1	1	0	Lumazine	binding	domain
DUF633	PF04816.7	gi|297527555|ref|YP_003669579.1|	-	0.087	12.1	0.0	0.12	11.6	0.0	1.3	1	0	0	1	1	1	0	Family	of	unknown	function	(DUF633)
Methyltransf_24	PF13578.1	gi|297527555|ref|YP_003669579.1|	-	0.11	13.3	0.0	0.14	12.9	0.0	1.3	1	0	0	1	1	1	0	Methyltransferase	domain
TrkA_N	PF02254.13	gi|297527555|ref|YP_003669579.1|	-	0.16	11.9	1.0	1.3	9.0	0.7	2.1	1	1	0	1	1	1	0	TrkA-N	domain
Ribosomal_S26e	PF01283.14	gi|297527558|ref|YP_003669582.1|	-	5.4e-34	116.8	2.5	5.8e-34	116.7	1.7	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S26e
Sgf11	PF08209.6	gi|297527558|ref|YP_003669582.1|	-	0.061	12.6	0.2	0.061	12.6	0.1	1.7	2	0	0	2	2	2	0	Sgf11	(transcriptional	regulation	protein)
DZR	PF12773.2	gi|297527558|ref|YP_003669582.1|	-	0.068	13.0	0.9	0.62	9.9	0.1	2.1	2	0	0	2	2	2	0	Double	zinc	ribbon
KOW	PF00467.24	gi|297527558|ref|YP_003669582.1|	-	0.11	12.2	0.5	0.25	11.1	0.4	1.6	1	0	0	1	1	1	0	KOW	motif
DUF164	PF02591.10	gi|297527558|ref|YP_003669582.1|	-	0.16	11.7	2.3	0.37	10.6	0.0	2.4	2	1	1	3	3	3	0	Putative	zinc	ribbon	domain
WCCH	PF03716.9	gi|297527558|ref|YP_003669582.1|	-	8.4	5.9	8.9	3.1	7.3	0.1	3.1	2	1	1	3	3	3	0	WCCH	motif
DNA_pol_B	PF00136.16	gi|297527559|ref|YP_003669583.1|	-	6.1e-88	295.6	0.1	9.8e-88	294.9	0.1	1.2	1	0	0	1	1	1	1	DNA	polymerase	family	B
DNA_pol_B_exo1	PF03104.14	gi|297527559|ref|YP_003669583.1|	-	2.9e-29	101.9	1.6	5.8e-29	100.9	1.1	1.5	1	0	0	1	1	1	1	DNA	polymerase	family	B,	exonuclease	domain
RNase_H_2	PF13482.1	gi|297527559|ref|YP_003669583.1|	-	9.6e-08	32.0	0.4	2.2e-06	27.5	0.0	3.4	3	2	0	3	3	3	1	RNase_H	superfamily
DNA_pol_B_exo2	PF10108.4	gi|297527559|ref|YP_003669583.1|	-	1.3e-05	24.8	0.0	2.7e-05	23.7	0.0	1.6	1	0	0	1	1	1	1	Predicted	3'-5'	exonuclease	related	to	the	exonuclease	domain	of	PolB
HTH_3	PF01381.17	gi|297527559|ref|YP_003669583.1|	-	0.038	13.8	0.7	8.9	6.2	0.1	3.2	3	0	0	3	3	3	0	Helix-turn-helix
DUF1662	PF07878.6	gi|297527559|ref|YP_003669583.1|	-	0.18	11.5	0.1	3.1	7.6	0.0	2.5	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1662)
HTH_19	PF12844.2	gi|297527559|ref|YP_003669583.1|	-	0.56	10.2	3.8	1.7	8.7	0.2	3.5	3	1	0	3	3	3	0	Helix-turn-helix	domain
NAC	PF01849.13	gi|297527560|ref|YP_003669584.1|	-	3.4e-15	55.2	1.1	5.9e-15	54.5	0.3	1.7	2	0	0	2	2	2	1	NAC	domain
UBA	PF00627.26	gi|297527560|ref|YP_003669584.1|	-	1.6e-06	27.8	0.0	3.9e-06	26.5	0.0	1.7	1	0	0	1	1	1	1	UBA/TS-N	domain
B5	PF03484.10	gi|297527560|ref|YP_003669584.1|	-	0.017	14.9	0.2	1.8	8.4	0.0	2.3	2	0	0	2	2	2	0	tRNA	synthetase	B5	domain
CUE	PF02845.11	gi|297527560|ref|YP_003669584.1|	-	0.022	14.2	0.0	9.2	5.8	0.0	3.0	2	1	1	3	3	3	0	CUE	domain
Beta-Casp	PF10996.3	gi|297527561|ref|YP_003669585.1|	-	9.6e-24	83.7	0.0	1.9e-23	82.7	0.0	1.5	1	0	0	1	1	1	1	Beta-Casp	domain
Lactamase_B	PF00753.22	gi|297527561|ref|YP_003669585.1|	-	4.2e-15	55.9	0.9	9e-15	54.8	0.6	1.6	1	0	0	1	1	1	1	Metallo-beta-lactamase	superfamily
Lactamase_B_2	PF12706.2	gi|297527561|ref|YP_003669585.1|	-	2.2e-12	46.9	0.1	4e-12	46.0	0.0	1.4	1	0	0	1	1	1	1	Beta-lactamase	superfamily	domain
RMMBL	PF07521.7	gi|297527561|ref|YP_003669585.1|	-	1.6e-10	40.6	0.0	3.5e-10	39.5	0.0	1.6	1	0	0	1	1	1	1	RNA-metabolising	metallo-beta-lactamase
Lactamase_B_3	PF13483.1	gi|297527561|ref|YP_003669585.1|	-	0.0013	18.4	0.0	0.003	17.2	0.0	1.6	1	1	0	1	1	1	1	Beta-lactamase	superfamily	domain
Rrf2	PF02082.15	gi|297527563|ref|YP_003669587.1|	-	0.00075	19.5	0.0	0.001	19.1	0.0	1.3	1	1	0	1	1	1	1	Transcriptional	regulator
MarR_2	PF12802.2	gi|297527563|ref|YP_003669587.1|	-	0.0012	18.4	0.1	0.0017	17.9	0.1	1.2	1	0	0	1	1	1	1	MarR	family
IF2_N	PF04760.10	gi|297527563|ref|YP_003669587.1|	-	0.0019	17.8	0.0	0.004	16.7	0.0	1.6	1	0	0	1	1	1	1	Translation	initiation	factor	IF-2,	N-terminal	region
Fe_dep_repress	PF01325.14	gi|297527563|ref|YP_003669587.1|	-	0.0033	17.3	0.0	0.0065	16.3	0.0	1.5	1	1	0	1	1	1	1	Iron	dependent	repressor,	N-terminal	DNA	binding	domain
HTH_23	PF13384.1	gi|297527563|ref|YP_003669587.1|	-	0.0092	15.6	0.1	0.015	14.9	0.1	1.4	1	0	0	1	1	1	1	Homeodomain-like	domain
DUF2774	PF11242.3	gi|297527563|ref|YP_003669587.1|	-	0.01	15.8	0.0	0.065	13.2	0.0	2.0	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2774)
HTH_24	PF13412.1	gi|297527563|ref|YP_003669587.1|	-	0.041	13.2	0.0	0.074	12.4	0.0	1.5	1	1	0	1	1	1	0	Winged	helix-turn-helix	DNA-binding
HTH_IclR	PF09339.5	gi|297527563|ref|YP_003669587.1|	-	0.052	13.1	0.1	0.078	12.5	0.0	1.3	1	0	0	1	1	1	0	IclR	helix-turn-helix	domain
GerE	PF00196.14	gi|297527563|ref|YP_003669587.1|	-	0.069	12.4	0.0	0.18	11.1	0.0	1.7	2	0	0	2	2	2	0	Bacterial	regulatory	proteins,	luxR	family
GTP_EFTU	PF00009.22	gi|297527564|ref|YP_003669588.1|	-	1e-58	197.9	0.1	1.5e-58	197.3	0.1	1.2	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
EFG_IV	PF03764.13	gi|297527564|ref|YP_003669588.1|	-	2.2e-32	111.1	0.1	1.5e-31	108.3	0.0	2.4	2	0	0	2	2	2	1	Elongation	factor	G,	domain	IV
EFG_II	PF14492.1	gi|297527564|ref|YP_003669588.1|	-	5.6e-24	83.7	0.0	1.3e-23	82.5	0.0	1.7	1	0	0	1	1	1	1	Elongation	Factor	G,	domain	II
EFG_C	PF00679.19	gi|297527564|ref|YP_003669588.1|	-	6.3e-20	70.8	0.0	1.6e-19	69.5	0.0	1.8	1	0	0	1	1	1	1	Elongation	factor	G	C-terminus
GTP_EFTU_D2	PF03144.20	gi|297527564|ref|YP_003669588.1|	-	2.9e-12	46.5	0.1	9.3e-12	44.8	0.1	2.0	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.18	gi|297527564|ref|YP_003669588.1|	-	6.6e-06	26.0	0.1	1.5e-05	24.9	0.0	1.6	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
Ras	PF00071.17	gi|297527564|ref|YP_003669588.1|	-	0.14	11.5	0.0	0.25	10.6	0.0	1.4	1	0	0	1	1	1	0	Ras	family
DHH	PF01368.15	gi|297527565|ref|YP_003669589.1|	-	1.6e-14	53.7	0.0	2.5e-14	53.1	0.0	1.3	1	0	0	1	1	1	1	DHH	family
DHHA1	PF02272.14	gi|297527565|ref|YP_003669589.1|	-	6.5e-09	35.3	0.9	1.3e-08	34.4	0.6	1.5	1	0	0	1	1	1	1	DHHA1	domain
DUF155	PF02582.9	gi|297527565|ref|YP_003669589.1|	-	0.035	13.9	0.1	0.072	12.9	0.0	1.5	1	0	0	1	1	1	0	Uncharacterised	ACR,	YagE	family	COG1723
ComK	PF06338.6	gi|297527565|ref|YP_003669589.1|	-	0.061	12.7	0.1	0.16	11.3	0.0	1.7	2	0	0	2	2	2	0	ComK	protein
Ribosomal_S30AE	PF02482.14	gi|297527566|ref|YP_003669590.1|	-	5.8e-05	23.4	0.3	6.8e-05	23.2	0.2	1.1	1	0	0	1	1	1	1	Sigma	54	modulation	protein	/	S30EA	ribosomal	protein
MgtE_N	PF03448.12	gi|297527566|ref|YP_003669590.1|	-	0.092	13.0	0.2	0.14	12.4	0.1	1.3	1	0	0	1	1	1	0	MgtE	intracellular	N	domain
RusA	PF05866.6	gi|297527566|ref|YP_003669590.1|	-	0.094	13.1	0.0	0.12	12.7	0.0	1.3	1	0	0	1	1	1	0	Endodeoxyribonuclease	RusA
Prefoldin_2	PF01920.15	gi|297527567|ref|YP_003669591.1|	-	4.6e-21	74.5	15.0	5.2e-21	74.4	10.4	1.0	1	0	0	1	1	1	1	Prefoldin	subunit
TelA	PF05816.6	gi|297527567|ref|YP_003669591.1|	-	0.00035	19.3	9.6	0.00044	19.0	6.7	1.0	1	0	0	1	1	1	1	Toxic	anion	resistance	protein	(TelA)
DASH_Dad3	PF08656.5	gi|297527567|ref|YP_003669591.1|	-	0.00047	19.7	1.8	0.00047	19.7	1.3	2.2	1	1	1	2	2	2	1	DASH	complex	subunit	Dad3
DUF869	PF05911.6	gi|297527567|ref|YP_003669591.1|	-	0.0025	16.1	3.7	0.0029	15.9	2.6	1.0	1	0	0	1	1	1	1	Plant	protein	of	unknown	function	(DUF869)
Prefoldin	PF02996.12	gi|297527567|ref|YP_003669591.1|	-	0.0028	17.3	10.5	0.19	11.4	0.1	2.5	1	1	1	2	2	2	2	Prefoldin	subunit
DUF4140	PF13600.1	gi|297527567|ref|YP_003669591.1|	-	0.015	15.7	7.5	0.26	11.7	0.2	2.4	1	1	0	2	2	2	0	N-terminal	domain	of	unknown	function	(DUF4140)
Prefoldin_3	PF13758.1	gi|297527567|ref|YP_003669591.1|	-	0.016	14.9	7.2	0.03	14.0	5.0	1.4	1	1	0	1	1	1	0	Prefoldin	subunit
Mnd1	PF03962.10	gi|297527567|ref|YP_003669591.1|	-	0.023	14.3	3.5	0.038	13.6	2.4	1.4	1	1	0	1	1	1	0	Mnd1	family
FliD_C	PF07195.7	gi|297527567|ref|YP_003669591.1|	-	0.028	13.7	3.0	0.044	13.0	2.1	1.3	1	1	0	1	1	1	0	Flagellar	hook-associated	protein	2	C-terminus
AAA_27	PF13514.1	gi|297527567|ref|YP_003669591.1|	-	0.032	11.9	5.0	0.07	10.8	3.5	1.3	1	1	0	1	1	1	0	AAA	domain
FlaC_arch	PF05377.6	gi|297527567|ref|YP_003669591.1|	-	0.041	13.7	6.7	0.35	10.7	1.9	2.4	2	0	0	2	2	2	0	Flagella	accessory	protein	C	(FlaC)
TMF_TATA_bd	PF12325.3	gi|297527567|ref|YP_003669591.1|	-	0.043	13.5	10.5	0.63	9.7	2.8	2.1	1	1	0	2	2	2	0	TATA	element	modulatory	factor	1	TATA	binding
Vps8	PF12816.2	gi|297527567|ref|YP_003669591.1|	-	0.044	13.0	0.5	0.07	12.3	0.2	1.4	1	1	0	1	1	1	0	Golgi	CORVET	complex	core	vacuolar	protein	8
Occludin_ELL	PF07303.8	gi|297527567|ref|YP_003669591.1|	-	0.086	13.5	6.6	0.35	11.6	4.0	2.0	1	1	0	1	1	1	0	Occludin	homology	domain
Nop16	PF09420.5	gi|297527567|ref|YP_003669591.1|	-	0.12	12.5	1.8	0.17	11.9	1.3	1.2	1	0	0	1	1	1	0	Ribosome	biogenesis	protein	Nop16
CASP_C	PF08172.7	gi|297527567|ref|YP_003669591.1|	-	0.13	11.2	1.7	0.16	10.9	1.2	1.1	1	0	0	1	1	1	0	CASP	C	terminal
DUF342	PF03961.8	gi|297527567|ref|YP_003669591.1|	-	0.16	10.3	9.5	1.1	7.5	6.6	1.9	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF342)
HAUS-augmin3	PF14932.1	gi|297527567|ref|YP_003669591.1|	-	0.16	11.1	7.9	0.16	11.0	4.8	1.4	1	1	0	1	1	1	0	HAUS	augmin-like	complex	subunit	3
DUF3829	PF12889.2	gi|297527567|ref|YP_003669591.1|	-	0.25	10.4	6.6	0.36	9.9	4.6	1.2	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3829)
CENP-F_leu_zip	PF10473.4	gi|297527567|ref|YP_003669591.1|	-	0.27	11.0	11.6	0.91	9.3	4.5	2.2	1	1	1	2	2	2	0	Leucine-rich	repeats	of	kinetochore	protein	Cenp-F/LEK1
TMF_DNA_bd	PF12329.3	gi|297527567|ref|YP_003669591.1|	-	0.31	10.8	15.1	0.58	10.0	6.8	2.3	2	0	0	2	2	2	0	TATA	element	modulatory	factor	1	DNA	binding
TPR_MLP1_2	PF07926.7	gi|297527567|ref|YP_003669591.1|	-	0.31	10.7	13.1	3.3	7.4	9.1	2.0	1	1	0	1	1	1	0	TPR/MLP1/MLP2-like	protein
Cortex-I_coil	PF09304.5	gi|297527567|ref|YP_003669591.1|	-	0.32	11.0	13.1	3.7	7.6	4.1	2.4	1	1	1	2	2	2	0	Cortexillin	I,	coiled	coil
Dynamitin	PF04912.9	gi|297527567|ref|YP_003669591.1|	-	0.33	9.7	9.6	0.2	10.4	3.5	1.9	1	1	1	2	2	2	0	Dynamitin
DUF2680	PF10925.3	gi|297527567|ref|YP_003669591.1|	-	0.34	10.8	4.0	0.32	10.8	0.5	2.4	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF2680)
Uds1	PF15456.1	gi|297527567|ref|YP_003669591.1|	-	0.39	10.7	5.1	0.53	10.2	3.5	1.1	1	0	0	1	1	1	0	Up-regulated	During	Septation
Seryl_tRNA_N	PF02403.17	gi|297527567|ref|YP_003669591.1|	-	0.39	10.7	11.7	3.9	7.5	0.1	2.2	1	1	1	2	2	2	0	Seryl-tRNA	synthetase	N-terminal	domain
FemAB	PF02388.11	gi|297527567|ref|YP_003669591.1|	-	0.41	9.2	6.0	2	7.0	4.2	1.8	1	1	0	1	1	1	0	FemAB	family
APG6	PF04111.7	gi|297527567|ref|YP_003669591.1|	-	0.41	9.6	10.1	0.77	8.7	7.0	1.4	1	1	0	1	1	1	0	Autophagy	protein	Apg6
BLOC1_2	PF10046.4	gi|297527567|ref|YP_003669591.1|	-	0.48	10.5	11.3	1.9	8.6	3.2	2.2	1	1	1	2	2	2	0	Biogenesis	of	lysosome-related	organelles	complex-1	subunit	2
Tektin	PF03148.9	gi|297527567|ref|YP_003669591.1|	-	0.49	8.8	10.6	0.75	8.2	3.0	2.0	1	1	1	2	2	2	0	Tektin	family
Tropomyosin_1	PF12718.2	gi|297527567|ref|YP_003669591.1|	-	0.66	9.8	10.7	3.8	7.3	7.4	1.9	1	1	0	1	1	1	0	Tropomyosin	like
Phage_GP20	PF06810.6	gi|297527567|ref|YP_003669591.1|	-	0.69	9.3	12.2	2.1	7.7	3.5	2.3	1	1	1	2	2	2	0	Phage	minor	structural	protein	GP20
DUF972	PF06156.8	gi|297527567|ref|YP_003669591.1|	-	0.77	10.1	6.4	2	8.7	1.1	2.2	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF972)
Snapin_Pallidin	PF14712.1	gi|297527567|ref|YP_003669591.1|	-	0.79	10.0	11.1	2.1	8.6	1.9	2.1	2	0	0	2	2	2	0	Snapin/Pallidin
ADIP	PF11559.3	gi|297527567|ref|YP_003669591.1|	-	0.82	9.5	9.0	2.1	8.2	1.6	2.1	1	1	1	2	2	2	0	Afadin-	and	alpha	-actinin-Binding
Cep57_MT_bd	PF06657.8	gi|297527567|ref|YP_003669591.1|	-	1.1	9.1	12.7	2.4	8.1	0.4	3.2	1	1	1	2	2	2	0	Centrosome	microtubule-binding	domain	of	Cep57
CCDC155	PF14662.1	gi|297527567|ref|YP_003669591.1|	-	1.2	8.7	11.8	4.2	6.9	8.2	1.7	1	1	0	1	1	1	0	Coiled-coil	region	of	CCDC155
IncA	PF04156.9	gi|297527567|ref|YP_003669591.1|	-	1.3	8.5	11.2	5.5	6.5	2.9	2.1	1	1	1	2	2	2	0	IncA	protein
DASH_Spc34	PF08657.5	gi|297527567|ref|YP_003669591.1|	-	1.3	8.5	10.1	4.7	6.7	7.0	1.8	1	1	0	1	1	1	0	DASH	complex	subunit	Spc34
Allexi_40kDa	PF05549.6	gi|297527567|ref|YP_003669591.1|	-	1.4	8.1	4.7	1.8	7.7	1.9	1.7	1	1	1	2	2	2	0	Allexivirus	40kDa	protein
UPF0184	PF03670.8	gi|297527567|ref|YP_003669591.1|	-	1.8	8.8	4.5	13	6.0	0.6	2.3	1	1	1	2	2	2	0	Uncharacterised	protein	family	(UPF0184)
MerR-DNA-bind	PF09278.6	gi|297527567|ref|YP_003669591.1|	-	1.8	9.0	10.6	7.6	7.0	2.3	2.3	2	0	0	2	2	2	0	MerR,	DNA	binding
DUF2968	PF11180.3	gi|297527567|ref|YP_003669591.1|	-	2.1	7.7	6.1	2	7.7	0.3	2.0	1	1	0	2	2	2	0	Protein	of	unknown	function	(DUF2968)
PspA_IM30	PF04012.7	gi|297527567|ref|YP_003669591.1|	-	2.3	7.4	10.9	7.6	5.8	2.7	2.1	1	1	1	2	2	2	0	PspA/IM30	family
DUF4200	PF13863.1	gi|297527567|ref|YP_003669591.1|	-	2.4	8.1	13.0	9.2	6.2	9.0	1.8	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4200)
PRP1_N	PF06424.7	gi|297527567|ref|YP_003669591.1|	-	2.9	8.2	5.3	2.7	8.2	1.9	1.8	1	1	1	2	2	2	0	PRP1	splicing	factor,	N-terminal
Nsp1_C	PF05064.8	gi|297527567|ref|YP_003669591.1|	-	2.9	7.5	10.9	5.5	6.6	1.0	2.1	1	1	1	2	2	2	0	Nsp1-like	C-terminal	region
Tnp_P_element	PF12017.3	gi|297527567|ref|YP_003669591.1|	-	2.9	7.0	5.7	2.2	7.4	0.2	2.0	1	1	1	2	2	2	0	Transposase	protein
Spc24	PF08286.6	gi|297527567|ref|YP_003669591.1|	-	3	7.5	8.9	5.2	6.8	1.7	2.1	1	1	1	2	2	2	0	Spc24	subunit	of	Ndc80
NPV_P10	PF05531.7	gi|297527567|ref|YP_003669591.1|	-	3.1	8.1	4.9	5.8	7.2	0.6	2.3	1	1	1	2	2	2	0	Nucleopolyhedrovirus	P10	protein
Macoilin	PF09726.4	gi|297527567|ref|YP_003669591.1|	-	3.4	5.8	7.0	4.2	5.5	4.8	1.1	1	0	0	1	1	1	0	Transmembrane	protein
DUF4635	PF15466.1	gi|297527567|ref|YP_003669591.1|	-	3.6	6.8	10.1	2.1	7.6	2.3	2.2	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4635)
Med4	PF10018.4	gi|297527567|ref|YP_003669591.1|	-	3.6	6.9	12.2	0.49	9.7	0.9	2.1	1	1	1	2	2	2	0	Vitamin-D-receptor	interacting	Mediator	subunit	4
bZIP_1	PF00170.16	gi|297527567|ref|YP_003669591.1|	-	4.3	7.3	10.6	2	8.4	3.9	2.3	2	1	1	3	3	3	0	bZIP	transcription	factor
Fib_alpha	PF08702.5	gi|297527567|ref|YP_003669591.1|	-	5.5	7.1	8.4	10	6.2	5.8	1.5	1	1	0	1	1	1	0	Fibrinogen	alpha/beta	chain	family
FTA4	PF13093.1	gi|297527567|ref|YP_003669591.1|	-	5.5	6.3	10.3	44	3.3	7.2	1.9	1	1	0	1	1	1	0	Kinetochore	complex	Fta4	of	Sim4	subunit,	or	CENP-50
DUF4094	PF13334.1	gi|297527567|ref|YP_003669591.1|	-	7.3	7.0	7.6	7.8	6.9	2.1	2.3	1	1	0	2	2	2	0	Domain	of	unknown	function	(DUF4094)
DUF724	PF05266.9	gi|297527567|ref|YP_003669591.1|	-	7.4	6.1	8.8	15	5.1	6.1	1.5	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF724)
Enkurin	PF13864.1	gi|297527567|ref|YP_003669591.1|	-	8.6	6.6	11.9	5.6	7.2	0.2	2.7	1	1	1	2	2	2	0	Calmodulin-binding
Pcc1	PF09341.5	gi|297527568|ref|YP_003669592.1|	-	4.4e-06	26.6	0.0	5.1e-06	26.4	0.0	1.1	1	0	0	1	1	1	1	Transcription	factor	Pcc1
Brix	PF04427.13	gi|297527569|ref|YP_003669593.1|	-	1.2e-18	67.4	0.1	1.4e-18	67.2	0.1	1.1	1	0	0	1	1	1	1	Brix	domain
Ribosomal_L37ae	PF01780.14	gi|297527570|ref|YP_003669594.1|	-	1.2e-31	108.3	5.4	1.3e-31	108.2	3.8	1.0	1	0	0	1	1	1	1	Ribosomal	L37ae	protein	family
Zn_Tnp_IS1595	PF12760.2	gi|297527570|ref|YP_003669594.1|	-	3e-05	23.7	1.8	4.3e-05	23.2	1.3	1.3	1	0	0	1	1	1	1	Transposase	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|297527570|ref|YP_003669594.1|	-	0.00015	21.3	0.3	0.0002	20.9	0.2	1.2	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
Prim_Zn_Ribbon	PF08273.7	gi|297527570|ref|YP_003669594.1|	-	0.003	17.6	4.5	0.0056	16.7	3.1	1.4	1	1	0	1	1	1	1	Zinc-binding	domain	of	primase-helicase
RRN7	PF11781.3	gi|297527570|ref|YP_003669594.1|	-	0.0075	15.7	2.2	0.0075	15.7	1.5	1.7	2	0	0	2	2	2	1	RNA	polymerase	I-specific	transcription	initiation	factor	Rrn7
Zn-ribbon_8	PF09723.5	gi|297527570|ref|YP_003669594.1|	-	0.028	14.3	1.2	0.45	10.5	0.0	2.2	2	0	0	2	2	2	0	Zinc	ribbon	domain
TF_Zn_Ribbon	PF08271.7	gi|297527570|ref|YP_003669594.1|	-	0.029	13.7	0.1	0.042	13.1	0.1	1.3	1	0	0	1	1	1	0	TFIIB	zinc-binding
Lar_restr_allev	PF14354.1	gi|297527570|ref|YP_003669594.1|	-	0.043	14.1	0.9	0.077	13.3	0.7	1.4	1	1	0	1	1	1	0	Restriction	alleviation	protein	Lar
A2L_zn_ribbon	PF08792.5	gi|297527570|ref|YP_003669594.1|	-	0.069	12.6	0.7	1.9	8.0	0.0	2.1	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
DZR	PF12773.2	gi|297527570|ref|YP_003669594.1|	-	0.074	12.8	0.7	0.26	11.1	0.6	1.6	1	1	1	2	2	2	0	Double	zinc	ribbon
DUF1610	PF07754.6	gi|297527570|ref|YP_003669594.1|	-	0.082	13.0	0.2	0.082	13.0	0.2	2.5	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF1610)
DUF3279	PF11682.3	gi|297527570|ref|YP_003669594.1|	-	0.14	11.7	2.2	0.35	10.4	0.6	1.9	1	1	1	2	2	2	0	Protein	of	unknown	function	(DUF3279)
zf-ribbon_3	PF13248.1	gi|297527570|ref|YP_003669594.1|	-	0.15	11.2	5.7	0.91	8.8	0.5	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
CpXC	PF14353.1	gi|297527570|ref|YP_003669594.1|	-	0.18	11.7	0.4	0.52	10.2	0.1	1.7	1	1	1	2	2	2	0	CpXC	protein
zf-C2H2_4	PF13894.1	gi|297527570|ref|YP_003669594.1|	-	0.22	11.9	1.2	9.7	6.7	0.1	2.3	2	0	0	2	2	2	0	C2H2-type	zinc	finger
Nudix_N_2	PF14803.1	gi|297527570|ref|YP_003669594.1|	-	0.26	11.0	1.6	5.5	6.7	0.1	2.3	2	0	0	2	2	2	0	Nudix	N-terminal
zf-ISL3	PF14690.1	gi|297527570|ref|YP_003669594.1|	-	0.29	11.1	3.4	4.2	7.4	0.2	2.5	3	0	0	3	3	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
DUF4379	PF14311.1	gi|297527570|ref|YP_003669594.1|	-	0.37	10.6	3.6	0.54	10.1	0.6	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4379)
TFIIS_C	PF01096.13	gi|297527570|ref|YP_003669594.1|	-	0.49	10.0	3.8	2.9	7.6	0.8	2.1	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
zinc_ribbon_2	PF13240.1	gi|297527570|ref|YP_003669594.1|	-	1.1	8.8	7.8	6.8	6.3	0.3	2.3	2	0	0	2	2	2	0	zinc-ribbon	domain
zf-H2C2_2	PF13465.1	gi|297527570|ref|YP_003669594.1|	-	1.7	9.1	4.9	1	9.7	0.3	2.2	1	1	1	2	2	2	0	Zinc-finger	double	domain
RNase_PH	PF01138.16	gi|297527571|ref|YP_003669595.1|	-	5.8e-25	88.1	0.0	3.3e-24	85.6	0.0	1.9	2	0	0	2	2	2	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.10	gi|297527571|ref|YP_003669595.1|	-	1.5e-11	44.0	1.2	1.5e-11	44.0	0.8	2.0	3	0	0	3	3	3	1	3'	exoribonuclease	family,	domain	2
TrkA_C	PF02080.16	gi|297527571|ref|YP_003669595.1|	-	0.4	10.2	3.0	0.89	9.1	1.0	2.4	3	0	0	3	3	3	0	TrkA-C	domain
DUF2283	PF10049.4	gi|297527571|ref|YP_003669595.1|	-	0.91	9.4	5.5	1.5	8.7	1.4	2.3	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF2283)
RNase_PH	PF01138.16	gi|297527572|ref|YP_003669596.1|	-	1.1e-35	122.8	0.0	1.4e-35	122.4	0.0	1.1	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	1
RNase_PH_C	PF03725.10	gi|297527572|ref|YP_003669596.1|	-	2e-14	53.2	0.6	3.7e-14	52.3	0.4	1.5	1	0	0	1	1	1	1	3'	exoribonuclease	family,	domain	2
AAA_10	PF12846.2	gi|297527572|ref|YP_003669596.1|	-	0.026	13.9	0.0	0.035	13.5	0.0	1.1	1	0	0	1	1	1	0	AAA-like	domain
KH_1	PF00013.24	gi|297527573|ref|YP_003669597.1|	-	6.9e-10	38.4	0.3	2.1e-09	36.8	0.2	1.9	1	0	0	1	1	1	1	KH	domain
KH_3	PF13014.1	gi|297527573|ref|YP_003669597.1|	-	1.7e-07	30.7	0.2	5.9e-07	28.9	0.0	2.0	2	0	0	2	2	2	1	KH	domain
KH_2	PF07650.12	gi|297527573|ref|YP_003669597.1|	-	2.5e-05	23.7	0.4	6.2e-05	22.4	0.3	1.6	1	0	0	1	1	1	1	KH	domain
ECR1_N	PF14382.1	gi|297527573|ref|YP_003669597.1|	-	0.03	13.6	0.1	0.3	10.4	0.0	2.3	2	0	0	2	2	2	0	Exosome	complex	exonuclease	RRP4	N-terminal	region
SBDS	PF01172.13	gi|297527574|ref|YP_003669598.1|	-	3.3e-26	90.8	0.1	5.9e-26	90.0	0.1	1.4	1	0	0	1	1	1	1	Shwachman-Bodian-Diamond	syndrome	(SBDS)	protein
SBDS_C	PF09377.5	gi|297527574|ref|YP_003669598.1|	-	1.5e-21	76.4	1.5	2.3e-21	75.7	1.0	1.3	1	0	0	1	1	1	1	SBDS	protein	C-terminal	domain
EFG_C	PF00679.19	gi|297527574|ref|YP_003669598.1|	-	0.0061	16.3	0.0	0.018	14.8	0.0	1.7	2	0	0	2	2	2	1	Elongation	factor	G	C-terminus
Proteasome	PF00227.21	gi|297527575|ref|YP_003669599.1|	-	2.1e-58	196.7	0.4	2.6e-58	196.4	0.2	1.1	1	0	0	1	1	1	1	Proteasome	subunit
Proteasome_A_N	PF10584.4	gi|297527575|ref|YP_003669599.1|	-	2.5e-14	52.2	2.1	4.7e-14	51.3	0.2	2.4	3	0	0	3	3	3	1	Proteasome	subunit	A	N-terminal	signature
NUFIP1	PF10453.4	gi|297527575|ref|YP_003669599.1|	-	0.11	11.9	0.2	0.2	11.2	0.1	1.4	1	0	0	1	1	1	0	Nuclear	fragile	X	mental	retardation-interacting	protein	1	(NUFIP1)
DUF424	PF04242.8	gi|297527575|ref|YP_003669599.1|	-	0.15	12.1	0.5	0.69	10.0	0.1	2.2	3	0	0	3	3	3	0	Protein	of	unknown	function	(DUF424)
RNase_P_Rpp14	PF01900.14	gi|297527576|ref|YP_003669600.1|	-	1.6e-18	66.5	0.1	2.4e-18	65.9	0.1	1.2	1	0	0	1	1	1	1	Rpp14/Pop5	family
DUF4446	PF14584.1	gi|297527576|ref|YP_003669600.1|	-	0.27	11.0	1.5	0.45	10.3	1.1	1.4	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF4446)
HAMP	PF00672.20	gi|297527576|ref|YP_003669600.1|	-	0.37	11.0	1.8	0.66	10.2	1.2	1.4	1	0	0	1	1	1	0	HAMP	domain
RNase_P_p30	PF01876.11	gi|297527577|ref|YP_003669601.1|	-	1.7e-22	79.2	2.0	2.2e-22	78.8	1.4	1.1	1	0	0	1	1	1	1	RNase	P	subunit	p30
Ribosomal_L10	PF00466.15	gi|297527577|ref|YP_003669601.1|	-	0.071	13.0	0.3	0.1	12.5	0.2	1.3	1	0	0	1	1	1	0	Ribosomal	protein	L10
RNA_binding	PF01877.12	gi|297527578|ref|YP_003669602.1|	-	1.3e-28	99.4	0.7	1.5e-28	99.1	0.5	1.1	1	0	0	1	1	1	1	RNA	binding
Aegerolysin	PF06355.8	gi|297527578|ref|YP_003669602.1|	-	0.089	12.6	0.0	0.13	12.1	0.0	1.3	1	0	0	1	1	1	0	Aegerolysin
Ribosomal_L15e	PF00827.12	gi|297527579|ref|YP_003669603.1|	-	1e-84	282.8	6.2	1.3e-84	282.5	4.1	1.3	1	1	0	1	1	1	1	Ribosomal	L15
MMR_HSR1_C	PF08438.5	gi|297527580|ref|YP_003669604.1|	-	3.1e-38	130.3	0.1	5.4e-38	129.5	0.0	1.4	1	0	0	1	1	1	1	GTPase	of	unknown	function	C-terminal
MMR_HSR1	PF01926.18	gi|297527580|ref|YP_003669604.1|	-	3.2e-19	68.9	0.0	1.7e-18	66.6	0.0	2.2	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
TGS	PF02824.16	gi|297527580|ref|YP_003669604.1|	-	3.4e-15	55.6	0.0	1.6e-14	53.4	0.0	2.0	2	0	0	2	2	2	1	TGS	domain
FeoB_N	PF02421.13	gi|297527580|ref|YP_003669604.1|	-	6.3e-06	25.5	1.4	7.1e-05	22.1	0.0	3.2	4	0	0	4	4	4	1	Ferrous	iron	transport	protein	B
GTP_EFTU	PF00009.22	gi|297527580|ref|YP_003669604.1|	-	0.00013	21.5	1.0	0.7	9.2	0.0	3.3	4	0	0	4	4	4	2	Elongation	factor	Tu	GTP	binding	domain
YchF-GTPase_C	PF06071.8	gi|297527580|ref|YP_003669604.1|	-	0.00014	21.5	0.1	0.024	14.4	0.0	2.6	1	1	1	2	2	2	1	Protein	of	unknown	function	(DUF933)
AAA_23	PF13476.1	gi|297527580|ref|YP_003669604.1|	-	0.015	15.6	0.4	0.044	14.0	0.1	1.8	2	0	0	2	2	2	0	AAA	domain
AAA_29	PF13555.1	gi|297527580|ref|YP_003669604.1|	-	0.021	14.3	0.0	0.038	13.5	0.0	1.4	1	0	0	1	1	1	0	P-loop	containing	region	of	AAA	domain
ABC_tran	PF00005.22	gi|297527580|ref|YP_003669604.1|	-	0.088	13.1	0.1	0.28	11.4	0.0	1.8	2	0	0	2	2	2	0	ABC	transporter
SRPRB	PF09439.5	gi|297527580|ref|YP_003669604.1|	-	0.13	11.4	0.1	18	4.4	0.0	2.6	2	0	0	2	2	2	0	Signal	recognition	particle	receptor	beta	subunit
MobB	PF03205.9	gi|297527580|ref|YP_003669604.1|	-	0.17	11.5	0.8	0.31	10.7	0.1	1.8	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
DUF2095	PF09868.4	gi|297527581|ref|YP_003669605.1|	-	1.2e-19	70.3	0.7	5.1e-18	65.0	0.5	2.0	1	1	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2095)
DED	PF01335.16	gi|297527581|ref|YP_003669605.1|	-	0.018	15.1	0.0	0.03	14.4	0.0	1.3	1	0	0	1	1	1	0	Death	effector	domain
L27	PF02828.11	gi|297527581|ref|YP_003669605.1|	-	0.056	13.1	0.1	0.088	12.5	0.0	1.3	1	0	0	1	1	1	0	L27	domain
NTP_transferase	PF00483.18	gi|297527582|ref|YP_003669606.1|	-	7.9e-38	130.1	0.0	1.1e-37	129.7	0.0	1.2	1	0	0	1	1	1	1	Nucleotidyl	transferase
Hexapep	PF00132.19	gi|297527582|ref|YP_003669606.1|	-	3.1e-21	73.8	18.6	3.7e-07	29.3	0.1	4.5	3	1	1	4	4	4	4	Bacterial	transferase	hexapeptide	(six	repeats)
NTP_transf_3	PF12804.2	gi|297527582|ref|YP_003669606.1|	-	1.4e-11	44.7	0.0	1.9e-11	44.2	0.0	1.2	1	0	0	1	1	1	1	MobA-like	NTP	transferase	domain
IspD	PF01128.14	gi|297527582|ref|YP_003669606.1|	-	3e-07	30.1	0.0	4.3e-07	29.6	0.0	1.2	1	0	0	1	1	1	1	2-C-methyl-D-erythritol	4-phosphate	cytidylyltransferase
Hexapep_2	PF14602.1	gi|297527582|ref|YP_003669606.1|	-	2.2e-05	23.8	5.7	0.006	16.1	0.0	3.9	4	0	0	4	4	4	2	Hexapeptide	repeat	of	succinyl-transferase
CTP_transf_3	PF02348.14	gi|297527582|ref|YP_003669606.1|	-	0.017	14.7	0.0	0.027	14.0	0.0	1.3	1	0	0	1	1	1	0	Cytidylyltransferase
Ribosomal_S3Ae	PF01015.13	gi|297527583|ref|YP_003669607.1|	-	1.2e-72	243.2	3.8	1.5e-72	243.0	2.6	1.0	1	0	0	1	1	1	1	Ribosomal	S3Ae	family
Ribosomal_S13_N	PF08069.7	gi|297527586|ref|YP_003669610.1|	-	4.8e-25	87.1	0.2	1.3e-24	85.7	0.1	1.8	2	0	0	2	2	2	1	Ribosomal	S13/S15	N-terminal	domain
Ribosomal_S15	PF00312.17	gi|297527586|ref|YP_003669610.1|	-	1.8e-17	62.8	0.2	2.4e-17	62.4	0.1	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S15
AHH	PF14412.1	gi|297527586|ref|YP_003669610.1|	-	0.13	12.2	0.0	0.18	11.7	0.0	1.2	1	0	0	1	1	1	0	A	nuclease	family	of	the	HNH/ENDO	VII	superfamily	with	conserved	AHH
Ham1p_like	PF01725.11	gi|297527587|ref|YP_003669611.1|	-	6.4e-49	165.8	0.0	7.7e-49	165.6	0.0	1.0	1	0	0	1	1	1	1	Ham1	family
Pkinase	PF00069.20	gi|297527588|ref|YP_003669612.1|	-	3.6e-13	49.2	0.1	5.1e-13	48.7	0.1	1.3	1	0	0	1	1	1	1	Protein	kinase	domain
RIO1	PF01163.17	gi|297527588|ref|YP_003669612.1|	-	5e-13	48.8	0.0	6.6e-13	48.4	0.0	1.3	1	0	0	1	1	1	1	RIO1	family
Pkinase_Tyr	PF07714.12	gi|297527588|ref|YP_003669612.1|	-	1.8e-08	33.7	0.0	2.1e-08	33.5	0.0	1.2	1	0	0	1	1	1	1	Protein	tyrosine	kinase
Kdo	PF06293.9	gi|297527588|ref|YP_003669612.1|	-	9.8e-08	31.2	0.0	1.8e-07	30.4	0.0	1.5	1	1	0	1	1	1	1	Lipopolysaccharide	kinase	(Kdo/WaaP)	family
APH	PF01636.18	gi|297527588|ref|YP_003669612.1|	-	2.6e-07	30.6	0.0	9.2e-05	22.2	0.0	2.1	1	1	1	2	2	2	2	Phosphotransferase	enzyme	family
WaaY	PF06176.6	gi|297527588|ref|YP_003669612.1|	-	0.00095	18.4	0.1	0.0014	17.8	0.1	1.3	1	0	0	1	1	1	1	Lipopolysaccharide	core	biosynthesis	protein	(WaaY)
Glyco_hydro_49	PF03718.8	gi|297527588|ref|YP_003669612.1|	-	0.04	12.0	0.0	0.049	11.7	0.0	1.2	1	0	0	1	1	1	0	Glycosyl	hydrolase	family	49
Peptidase_M22	PF00814.20	gi|297527589|ref|YP_003669613.1|	-	1.2e-71	241.4	0.0	1.4e-71	241.1	0.0	1.0	1	0	0	1	1	1	1	Glycoprotease	family
Adeno_shaft	PF00608.12	gi|297527589|ref|YP_003669613.1|	-	0.093	12.3	0.1	0.21	11.2	0.1	1.6	1	0	0	1	1	1	0	Adenoviral	fibre	protein	(repeat/shaft	region)
Ribosomal_S27	PF01599.14	gi|297527590|ref|YP_003669614.1|	-	4.7e-08	32.7	2.3	5.7e-08	32.4	1.6	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S27a
RNA_POL_M_15KD	PF02150.11	gi|297527590|ref|YP_003669614.1|	-	0.001	18.6	0.1	0.0019	17.8	0.1	1.5	1	1	0	1	1	1	1	RNA	polymerases	M/15	Kd	subunit
Nudix_N_2	PF14803.1	gi|297527590|ref|YP_003669614.1|	-	0.0018	17.9	4.2	0.0084	15.7	2.9	1.9	1	1	0	1	1	1	1	Nudix	N-terminal
zf-ribbon_3	PF13248.1	gi|297527590|ref|YP_003669614.1|	-	0.0024	17.0	2.5	0.089	12.0	0.2	2.2	2	0	0	2	2	2	1	zinc-ribbon	domain
OrfB_Zn_ribbon	PF07282.6	gi|297527590|ref|YP_003669614.1|	-	0.0025	17.4	0.5	0.0028	17.2	0.4	1.1	1	0	0	1	1	1	1	Putative	transposase	DNA-binding	domain
IBR	PF01485.16	gi|297527590|ref|YP_003669614.1|	-	0.0026	17.5	0.6	0.0031	17.3	0.4	1.1	1	0	0	1	1	1	1	IBR	domain
DZR	PF12773.2	gi|297527590|ref|YP_003669614.1|	-	0.006	16.3	0.8	0.0075	16.0	0.5	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
C1_1	PF00130.17	gi|297527590|ref|YP_003669614.1|	-	0.0061	16.2	1.6	0.008	15.8	1.1	1.2	1	0	0	1	1	1	1	Phorbol	esters/diacylglycerol	binding	domain	(C1	domain)
TF_Zn_Ribbon	PF08271.7	gi|297527590|ref|YP_003669614.1|	-	0.011	15.0	4.5	2.6	7.4	0.2	3.0	3	0	0	3	3	3	0	TFIIB	zinc-binding
A2L_zn_ribbon	PF08792.5	gi|297527590|ref|YP_003669614.1|	-	0.011	15.1	2.2	0.83	9.1	0.2	2.1	2	0	0	2	2	2	0	A2L	zinc	ribbon	domain
Zn_Tnp_IS1595	PF12760.2	gi|297527590|ref|YP_003669614.1|	-	0.012	15.3	3.8	0.016	15.0	2.6	1.2	1	0	0	1	1	1	0	Transposase	zinc-ribbon	domain
zinc_ribbon_2	PF13240.1	gi|297527590|ref|YP_003669614.1|	-	0.022	14.2	4.6	0.21	11.1	0.4	2.2	2	0	0	2	2	2	0	zinc-ribbon	domain
Zn_ribbon_recom	PF13408.1	gi|297527590|ref|YP_003669614.1|	-	0.035	14.3	3.1	0.064	13.5	2.1	1.5	1	1	0	1	1	1	0	Recombinase	zinc	beta	ribbon	domain
FeS	PF04060.8	gi|297527590|ref|YP_003669614.1|	-	0.043	13.3	1.7	0.23	11.0	0.0	2.1	2	0	0	2	2	2	0	Putative	Fe-S	cluster
FYVE	PF01363.16	gi|297527590|ref|YP_003669614.1|	-	0.045	13.6	1.4	0.06	13.2	1.0	1.1	1	0	0	1	1	1	0	FYVE	zinc	finger
zf-H2C2_2	PF13465.1	gi|297527590|ref|YP_003669614.1|	-	0.046	14.0	6.2	2	8.8	0.4	2.2	2	0	0	2	2	2	0	Zinc-finger	double	domain
DUF2387	PF09526.5	gi|297527590|ref|YP_003669614.1|	-	0.061	13.2	1.1	0.082	12.8	0.7	1.2	1	0	0	1	1	1	0	Probable	metal-binding	protein	(DUF2387)
Ribosomal_L37ae	PF01780.14	gi|297527590|ref|YP_003669614.1|	-	0.078	12.8	1.2	0.096	12.5	0.8	1.1	1	0	0	1	1	1	0	Ribosomal	L37ae	protein	family
zf-RanBP	PF00641.13	gi|297527590|ref|YP_003669614.1|	-	0.12	11.5	2.7	1.9	7.6	0.1	2.2	2	0	0	2	2	2	0	Zn-finger	in	Ran	binding	protein	and	others
zf-tcix	PF14952.1	gi|297527590|ref|YP_003669614.1|	-	0.13	11.5	0.9	0.13	11.5	0.6	2.1	2	0	0	2	2	2	0	Putative	treble-clef,	zinc-finger,	Zn-binding
zf-NADH-PPase	PF09297.6	gi|297527590|ref|YP_003669614.1|	-	0.17	11.4	3.2	4.7	6.8	0.0	2.1	2	0	0	2	2	2	0	NADH	pyrophosphatase	zinc	ribbon	domain
DUF2082	PF09855.4	gi|297527590|ref|YP_003669614.1|	-	0.18	11.6	4.1	4.1	7.3	0.2	2.2	2	0	0	2	2	2	0	Nucleic-acid-binding	protein	containing	Zn-ribbon	domain	(DUF2082)
Baculo_ME53	PF06061.6	gi|297527590|ref|YP_003669614.1|	-	0.2	10.6	2.9	0.19	10.6	2.0	1.0	1	0	0	1	1	1	0	Baculoviridae	ME53
GFA	PF04828.9	gi|297527590|ref|YP_003669614.1|	-	0.2	11.5	2.5	2.4	8.1	0.1	2.0	1	1	1	2	2	2	0	Glutathione-dependent	formaldehyde-activating	enzyme
zf-LITAF-like	PF10601.4	gi|297527590|ref|YP_003669614.1|	-	0.2	11.5	0.3	0.2	11.5	0.2	1.9	1	1	0	2	2	2	0	LITAF-like	zinc	ribbon	domain
PhnA_Zn_Ribbon	PF08274.7	gi|297527590|ref|YP_003669614.1|	-	0.36	10.6	2.1	1	9.2	1.4	1.7	1	1	0	1	1	1	0	PhnA	Zinc-Ribbon
TFIIS_C	PF01096.13	gi|297527590|ref|YP_003669614.1|	-	0.42	10.2	3.0	2.6	7.7	0.2	2.2	2	0	0	2	2	2	0	Transcription	factor	S-II	(TFIIS)
Auto_anti-p27	PF06677.7	gi|297527590|ref|YP_003669614.1|	-	0.44	10.3	4.3	2.7	7.8	0.3	2.4	3	0	0	3	3	2	0	Sjogren's	syndrome/scleroderma	autoantigen	1	(Autoantigen	p27)
zf-ISL3	PF14690.1	gi|297527590|ref|YP_003669614.1|	-	0.46	10.5	9.7	0.28	11.2	0.4	2.5	2	1	2	4	4	3	0	zinc-finger	of	transposase	IS204/IS1001/IS1096/IS1165
PDDEXK_1	PF12705.2	gi|297527590|ref|YP_003669614.1|	-	0.95	8.7	3.5	0.6	9.4	0.2	1.8	1	1	0	2	2	2	0	PD-(D/E)XK	nuclease	superfamily
ADK_lid	PF05191.9	gi|297527590|ref|YP_003669614.1|	-	1.6	8.4	5.0	11	5.7	0.4	2.2	1	1	0	2	2	2	0	Adenylate	kinase,	active	site	lid
DUF4379	PF14311.1	gi|297527590|ref|YP_003669614.1|	-	1.8	8.4	5.0	5	7.0	0.2	2.1	2	0	0	2	2	2	0	Domain	of	unknown	function	(DUF4379)
Zn-ribbon_8	PF09723.5	gi|297527590|ref|YP_003669614.1|	-	2.8	7.9	7.9	0.78	9.7	0.8	2.2	1	1	1	2	2	2	0	Zinc	ribbon	domain
DUF35_N	PF12172.3	gi|297527590|ref|YP_003669614.1|	-	3.3	7.7	5.2	17	5.5	0.1	2.0	1	1	1	2	2	2	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
UPF0547	PF10571.4	gi|297527590|ref|YP_003669614.1|	-	4.9	6.9	8.3	1.4	8.6	0.4	2.4	2	1	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zf-MYND	PF01753.13	gi|297527590|ref|YP_003669614.1|	-	5.3	6.9	6.6	36	4.3	4.6	2.0	1	1	0	1	1	1	0	MYND	finger
YhfH	PF14149.1	gi|297527590|ref|YP_003669614.1|	-	6.4	6.6	9.6	2	8.3	1.7	2.2	1	1	1	2	2	2	0	YhfH-like	protein
Rubredoxin	PF00301.15	gi|297527590|ref|YP_003669614.1|	-	6.4	6.7	8.0	12	5.8	0.9	2.3	1	1	1	2	2	2	0	Rubredoxin
Ribosomal_S24e	PF01282.14	gi|297527591|ref|YP_003669615.1|	-	2.3e-25	88.1	0.1	3e-25	87.8	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S24e
RNA_helicase	PF00910.17	gi|297527591|ref|YP_003669615.1|	-	0.0019	18.3	0.0	0.0028	17.8	0.0	1.2	1	0	0	1	1	1	1	RNA	helicase
DUF359	PF04019.7	gi|297527592|ref|YP_003669616.1|	-	5.7e-17	61.2	0.2	8e-17	60.7	0.1	1.2	1	0	0	1	1	1	1	Protein	of	unknown	function	(DUF359)
DUF4468	PF14730.1	gi|297527592|ref|YP_003669616.1|	-	0.1	12.2	0.1	0.16	11.7	0.0	1.4	1	0	0	1	1	1	0	Domain	of	unknown	function	(DUF4468)	with	TBP-like	fold
Spt4	PF06093.8	gi|297527593|ref|YP_003669617.1|	-	4.3e-16	58.5	0.1	5.1e-16	58.3	0.0	1.1	1	0	0	1	1	1	1	Spt4/RpoE2	zinc	finger
zinc_ribbon_2	PF13240.1	gi|297527593|ref|YP_003669617.1|	-	0.0001	21.6	1.6	0.00016	21.0	1.1	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
zf-ribbon_3	PF13248.1	gi|297527593|ref|YP_003669617.1|	-	0.00027	20.0	2.7	0.00037	19.6	1.8	1.2	1	0	0	1	1	1	1	zinc-ribbon	domain
UPF0547	PF10571.4	gi|297527593|ref|YP_003669617.1|	-	0.00054	19.5	3.9	0.00083	18.9	2.7	1.3	1	0	0	1	1	1	1	Uncharacterised	protein	family	UPF0547
DZR	PF12773.2	gi|297527593|ref|YP_003669617.1|	-	0.00083	19.1	1.3	0.001	18.8	0.9	1.2	1	0	0	1	1	1	1	Double	zinc	ribbon
NRDD	PF13597.1	gi|297527593|ref|YP_003669617.1|	-	0.0037	15.4	0.4	0.0041	15.2	0.3	1.0	1	0	0	1	1	1	1	Anaerobic	ribonucleoside-triphosphate	reductase
HypA	PF01155.14	gi|297527593|ref|YP_003669617.1|	-	0.016	14.8	0.3	0.018	14.6	0.2	1.1	1	0	0	1	1	1	0	Hydrogenase	expression/synthesis	hypA	family
zf-C4H2	PF10146.4	gi|297527593|ref|YP_003669617.1|	-	0.021	14.8	2.3	0.025	14.6	1.6	1.1	1	0	0	1	1	1	0	Zinc	finger-containing	protein
Lar_restr_allev	PF14354.1	gi|297527593|ref|YP_003669617.1|	-	0.039	14.2	1.7	0.097	12.9	0.1	1.9	1	1	1	2	2	2	0	Restriction	alleviation	protein	Lar
TF_Zn_Ribbon	PF08271.7	gi|297527593|ref|YP_003669617.1|	-	0.044	13.0	1.7	0.05	12.9	0.2	1.9	2	1	0	2	2	2	0	TFIIB	zinc-binding
Zn-ribbon_8	PF09723.5	gi|297527593|ref|YP_003669617.1|	-	0.076	12.9	5.2	2.3	8.2	3.6	2.1	1	1	1	2	2	2	0	Zinc	ribbon	domain
zf-RING_4	PF14570.1	gi|297527593|ref|YP_003669617.1|	-	0.1	12.2	2.2	0.14	11.7	1.5	1.2	1	0	0	1	1	1	0	RING/Ubox	like	zinc-binding	domain
Zn_Tnp_IS1595	PF12760.2	gi|297527593|ref|YP_003669617.1|	-	0.37	10.6	5.6	2	8.2	3.7	2.1	1	1	1	2	2	2	0	Transposase	zinc-ribbon	domain
DUF35_N	PF12172.3	gi|297527593|ref|YP_003669617.1|	-	0.75	9.7	4.0	3.3	7.7	2.7	1.9	1	1	0	1	1	1	0	Rubredoxin-like	zinc	ribbon	domain	(DUF35_N)
zf-IS66	PF13005.2	gi|297527593|ref|YP_003669617.1|	-	1.4	8.9	5.9	2.7	8.0	0.1	2.2	2	0	0	2	2	2	0	zinc-finger	binding	domain	of	transposase	IS66
Prim_Zn_Ribbon	PF08273.7	gi|297527593|ref|YP_003669617.1|	-	1.7	8.7	6.5	0.36	10.9	1.0	2.0	1	1	1	2	2	2	0	Zinc-binding	domain	of	primase-helicase
VP_N-CPKC	PF11475.3	gi|297527593|ref|YP_003669617.1|	-	3.1	7.4	5.7	3.5	7.2	0.2	2.1	1	1	1	2	2	2	0	Virion	protein	N	terminal	domain
SHS2_Rpb7-N	PF03876.12	gi|297527594|ref|YP_003669618.1|	-	2.5e-17	62.7	0.0	4.8e-17	61.8	0.0	1.5	1	0	0	1	1	1	1	SHS2	domain	found	in	N	terminus	of	Rpb7p/Rpc25p/MJ0397
S1	PF00575.18	gi|297527594|ref|YP_003669618.1|	-	2.6e-09	37.0	0.0	2.1e-07	30.9	0.0	2.4	2	0	0	2	2	2	1	S1	RNA	binding	domain
RNA_pol_Rbc25	PF08292.7	gi|297527594|ref|YP_003669618.1|	-	0.0034	17.5	0.0	0.0088	16.2	0.0	1.8	2	0	0	2	2	2	1	RNA	polymerase	III	subunit	Rpc25
Fcf1	PF04900.7	gi|297527595|ref|YP_003669619.1|	-	1.1e-15	57.4	0.1	1.8e-15	56.8	0.0	1.3	1	0	0	1	1	1	1	Fcf1
PIN	PF01850.16	gi|297527595|ref|YP_003669619.1|	-	2.9e-05	24.3	0.5	7.5e-05	23.0	0.4	1.6	1	1	0	1	1	1	1	PIN	domain
PIN_4	PF13638.1	gi|297527595|ref|YP_003669619.1|	-	0.014	15.5	0.3	0.08	13.0	0.2	1.9	1	1	0	1	1	1	0	PIN	domain
DUF4411	PF14367.1	gi|297527595|ref|YP_003669619.1|	-	0.03	14.0	0.2	0.27	10.9	0.1	2.1	1	1	0	1	1	1	0	Domain	of	unknown	function	(DUF4411)
GTP_EFTU	PF00009.22	gi|297527596|ref|YP_003669620.1|	-	4.9e-41	140.2	0.0	8.7e-41	139.4	0.0	1.4	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
eIF2_C	PF09173.6	gi|297527596|ref|YP_003669620.1|	-	1.2e-25	89.3	2.0	2.3e-25	88.4	1.4	1.5	1	0	0	1	1	1	1	Initiation	factor	eIF2	gamma,	C	terminal
GTP_EFTU_D2	PF03144.20	gi|297527596|ref|YP_003669620.1|	-	1.2e-06	28.4	0.8	3.2e-05	23.9	0.4	2.7	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
PduV-EutP	PF10662.4	gi|297527596|ref|YP_003669620.1|	-	0.00029	20.3	0.1	0.39	10.2	0.0	2.3	2	0	0	2	2	2	2	Ethanolamine	utilisation	-	propanediol	utilisation
MMR_HSR1	PF01926.18	gi|297527596|ref|YP_003669620.1|	-	0.0014	18.5	0.0	0.003	17.5	0.0	1.6	1	0	0	1	1	1	1	50S	ribosome-binding	GTPase
FeoB_N	PF02421.13	gi|297527596|ref|YP_003669620.1|	-	0.046	12.9	0.6	3.7	6.8	0.0	2.3	2	0	0	2	2	2	0	Ferrous	iron	transport	protein	B
Dynamin_N	PF00350.18	gi|297527596|ref|YP_003669620.1|	-	0.099	12.4	0.1	0.23	11.2	0.0	1.9	1	1	0	1	1	1	0	Dynamin	family
MobB	PF03205.9	gi|297527596|ref|YP_003669620.1|	-	0.1	12.2	0.0	0.22	11.2	0.0	1.5	1	0	0	1	1	1	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
Miro	PF08477.8	gi|297527596|ref|YP_003669620.1|	-	0.12	12.8	0.0	0.35	11.3	0.0	1.9	1	1	0	1	1	1	0	Miro-like	protein
Ribosomal_S6e	PF01092.14	gi|297527597|ref|YP_003669621.1|	-	1.7e-28	98.7	0.5	1.7e-28	98.7	0.3	2.0	2	1	1	3	3	3	1	Ribosomal	protein	S6e
GTP_EFTU	PF00009.22	gi|297527598|ref|YP_003669622.1|	-	2.1e-32	112.1	0.1	1.5e-31	109.3	0.0	2.3	2	1	0	2	2	2	1	Elongation	factor	Tu	GTP	binding	domain
IF-2	PF11987.3	gi|297527598|ref|YP_003669622.1|	-	6e-25	87.2	2.8	1.7e-24	85.7	1.6	2.0	2	0	0	2	2	2	1	Translation-initiation	factor	2
GTP_EFTU_D4	PF14578.1	gi|297527598|ref|YP_003669622.1|	-	3.6e-22	77.7	0.6	3.6e-22	77.7	0.4	2.4	3	0	0	3	3	3	1	Elongation	factor	Tu	domain	4
GTP_EFTU_D2	PF03144.20	gi|297527598|ref|YP_003669622.1|	-	1.1e-12	47.8	0.3	1.1e-12	47.8	0.2	3.4	3	0	0	3	3	3	1	Elongation	factor	Tu	domain	2
MMR_HSR1	PF01926.18	gi|297527598|ref|YP_003669622.1|	-	1.4e-06	28.2	0.2	5e-06	26.4	0.0	2.1	2	0	0	2	2	2	1	50S	ribosome-binding	GTPase
Miro	PF08477.8	gi|297527598|ref|YP_003669622.1|	-	8.9e-05	22.9	0.1	0.00034	21.1	0.0	2.1	2	0	0	2	2	1	1	Miro-like	protein
Dynamin_N	PF00350.18	gi|297527598|ref|YP_003669622.1|	-	0.0017	18.2	0.1	0.097	12.4	0.0	3.1	3	0	0	3	3	3	1	Dynamin	family
AAA_22	PF13401.1	gi|297527598|ref|YP_003669622.1|	-	0.0088	16.1	0.0	0.021	14.9	0.0	1.6	1	0	0	1	1	1	1	AAA	domain
Ras	PF00071.17	gi|297527598|ref|YP_003669622.1|	-	0.013	14.9	0.0	0.077	12.3	0.0	2.4	1	1	0	1	1	1	0	Ras	family
Arf	PF00025.16	gi|297527598|ref|YP_003669622.1|	-	0.023	13.9	0.0	5.9	6.1	0.0	3.3	4	0	0	4	4	4	0	ADP-ribosylation	factor	family
DLIC	PF05783.6	gi|297527598|ref|YP_003669622.1|	-	0.031	12.9	0.1	0.17	10.5	0.0	1.9	2	0	0	2	2	2	0	Dynein	light	intermediate	chain	(DLIC)
PduV-EutP	PF10662.4	gi|297527598|ref|YP_003669622.1|	-	0.053	13.0	0.3	0.81	9.1	0.0	2.9	3	0	0	3	3	3	0	Ethanolamine	utilisation	-	propanediol	utilisation
MobB	PF03205.9	gi|297527598|ref|YP_003669622.1|	-	0.072	12.7	0.3	0.35	10.5	0.1	2.3	2	0	0	2	2	2	0	Molybdopterin	guanine	dinucleotide	synthesis	protein	B
ATP_bind_1	PF03029.12	gi|297527598|ref|YP_003669622.1|	-	0.13	11.7	0.0	0.61	9.5	0.0	2.0	1	1	0	2	2	2	0	Conserved	hypothetical	ATP	binding	protein
DUF258	PF03193.11	gi|297527598|ref|YP_003669622.1|	-	0.17	11.0	0.1	0.51	9.5	0.0	1.8	2	0	0	2	2	2	0	Protein	of	unknown	function,	DUF258
NDK	PF00334.14	gi|297527599|ref|YP_003669623.1|	-	3.9e-59	198.2	0.0	4.3e-59	198.1	0.0	1.0	1	0	0	1	1	1	1	Nucleoside	diphosphate	kinase
Ribosomal_L24e	PF01246.15	gi|297527600|ref|YP_003669624.1|	-	3.6e-22	78.0	0.5	3.8e-22	77.9	0.3	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L24e
zf-FCS	PF06467.9	gi|297527600|ref|YP_003669624.1|	-	1.2e-07	31.2	0.9	1.7e-07	30.7	0.6	1.2	1	0	0	1	1	1	1	MYM-type	Zinc	finger	with	FCS	sequence	motif
DUF581	PF04570.9	gi|297527600|ref|YP_003669624.1|	-	0.013	14.8	0.5	0.02	14.1	0.4	1.3	1	1	0	1	1	1	0	Protein	of	unknown	function	(DUF581)
Baculo_RING	PF05883.6	gi|297527600|ref|YP_003669624.1|	-	0.038	13.8	0.1	0.04	13.7	0.0	1.1	1	0	0	1	1	1	0	Baculovirus	U-box/Ring-like	domain
DUF2175	PF09943.4	gi|297527600|ref|YP_003669624.1|	-	0.061	13.3	0.1	0.061	13.3	0.0	1.1	1	0	0	1	1	1	0	Uncharacterized	protein	conserved	in	archaea	(DUF2175)
zf-C4_ClpX	PF06689.8	gi|297527600|ref|YP_003669624.1|	-	0.074	12.5	0.1	0.074	12.5	0.1	1.6	2	0	0	2	2	2	0	ClpX	C4-type	zinc	finger
zf-C2HC_2	PF13913.1	gi|297527600|ref|YP_003669624.1|	-	0.13	11.9	0.4	0.13	11.9	0.3	1.9	2	0	0	2	2	2	0	zinc-finger	of	a	C2HC-type
zf-ribbon_3	PF13248.1	gi|297527600|ref|YP_003669624.1|	-	0.13	11.4	1.2	0.22	10.8	0.8	1.5	1	1	0	1	1	1	0	zinc-ribbon	domain
DUF2116	PF09889.4	gi|297527600|ref|YP_003669624.1|	-	0.17	11.6	1.6	1.9	8.3	0.1	2.0	2	0	0	2	2	2	0	Uncharacterized	protein	containing	a	Zn-ribbon	(DUF2116)
zinc_ribbon_2	PF13240.1	gi|297527600|ref|YP_003669624.1|	-	0.25	10.8	0.3	0.25	10.8	0.2	1.8	2	0	0	2	2	2	0	zinc-ribbon	domain
Ribosomal_S28e	PF01200.13	gi|297527601|ref|YP_003669625.1|	-	4.2e-31	106.4	4.6	5.4e-31	106.1	3.2	1.2	1	0	0	1	1	1	1	Ribosomal	protein	S28e
potato_inhibit	PF00280.13	gi|297527601|ref|YP_003669625.1|	-	0.082	13.0	4.0	1.1	9.4	2.8	2.1	1	1	0	1	1	1	0	Potato	inhibitor	I	family
KOW	PF00467.24	gi|297527601|ref|YP_003669625.1|	-	0.13	12.0	2.4	0.66	9.8	0.1	2.8	2	1	0	2	2	2	0	KOW	motif
Ribosomal_L7Ae	PF01248.21	gi|297527602|ref|YP_003669626.1|	-	6.2e-31	105.7	0.5	7.8e-31	105.4	0.4	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
PELOTA_1	PF15608.1	gi|297527602|ref|YP_003669626.1|	-	0.002	17.8	0.1	0.0031	17.2	0.1	1.4	1	0	0	1	1	1	1	PELOTA	RNA	binding	domain
RNase_P_pop3	PF08228.6	gi|297527602|ref|YP_003669626.1|	-	0.013	15.3	0.0	0.015	15.1	0.0	1.1	1	0	0	1	1	1	0	RNase	P	subunit	Pop3
DbpA	PF03880.10	gi|297527602|ref|YP_003669626.1|	-	0.058	13.0	0.1	0.51	10.0	0.0	2.5	3	0	0	3	3	3	0	DbpA	RNA	binding	domain
DUF3420	PF11900.3	gi|297527602|ref|YP_003669626.1|	-	0.17	11.9	1.8	0.6	10.2	0.1	2.5	3	0	0	3	3	3	0	Domain	of	unknown	function	(DUF3420)
NTS	PF15447.1	gi|297527602|ref|YP_003669626.1|	-	1.6	9.1	3.7	22	5.5	0.1	2.3	2	0	0	2	2	2	0	N-terminal	segments	of	PfEMP1
tRNA-synt_1c	PF00749.16	gi|297527603|ref|YP_003669627.1|	-	3.3e-70	236.2	0.0	4.6e-70	235.7	0.0	1.2	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(E	and	Q),	catalytic	domain
tRNA-synt_1c_C	PF03950.13	gi|297527603|ref|YP_003669627.1|	-	4.3e-24	85.1	0.0	7.8e-24	84.2	0.0	1.4	1	0	0	1	1	1	1	tRNA	synthetases	class	I	(E	and	Q),	anti-codon	binding	domain
DUF2118	PF09891.4	gi|297527604|ref|YP_003669628.1|	-	7.8e-25	87.3	4.0	9.3e-25	87.0	2.8	1.1	1	0	0	1	1	1	1	Uncharacterized	protein	conserved	in	archaea	(DUF2118)
FMN_dh	PF01070.13	gi|297527605|ref|YP_003669629.1|	-	5.4e-21	74.8	0.0	1e-12	47.5	0.0	2.1	1	1	1	2	2	2	2	FMN-dependent	dehydrogenase
Memo	PF01875.12	gi|297527606|ref|YP_003669630.1|	-	6.5e-83	277.7	0.0	7.3e-83	277.6	0.0	1.0	1	0	0	1	1	1	1	Memo-like	protein
LigB	PF02900.13	gi|297527606|ref|YP_003669630.1|	-	0.028	13.3	0.0	0.072	12.0	0.0	1.6	1	1	0	1	1	1	0	Catalytic	LigB	subunit	of	aromatic	ring-opening	dioxygenase
HP_OMP_2	PF02521.9	gi|297527606|ref|YP_003669630.1|	-	0.097	11.2	0.0	0.13	10.7	0.0	1.1	1	0	0	1	1	1	0	Putative	outer	membrane	protein
Ribosomal_S2	PF00318.15	gi|297527607|ref|YP_003669631.1|	-	3.3e-41	140.8	0.0	3e-20	72.3	0.0	2.1	1	1	1	2	2	2	2	Ribosomal	protein	S2
RNA_pol_N	PF01194.12	gi|297527608|ref|YP_003669632.1|	-	2e-31	107.7	0.2	2.2e-31	107.6	0.1	1.0	1	0	0	1	1	1	1	RNA	polymerases	N	/	8	kDa	subunit
Chordopox_RPO7	PF05864.7	gi|297527608|ref|YP_003669632.1|	-	0.01	15.9	0.2	0.018	15.1	0.1	1.4	1	1	0	1	1	1	0	Chordopoxvirus	DNA-directed	RNA	polymerase	7	kDa	polypeptide	(RPO7)
Ribosomal_S9	PF00380.14	gi|297527609|ref|YP_003669633.1|	-	1.1e-34	119.2	0.0	1.2e-34	119.1	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S9/S16
Ribosomal_L13	PF00572.13	gi|297527610|ref|YP_003669634.1|	-	1.9e-27	95.8	0.3	2.3e-27	95.5	0.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L13
Ribosomal_L18e	PF00828.14	gi|297527611|ref|YP_003669635.1|	-	6e-16	58.9	0.8	7.4e-16	58.7	0.6	1.1	1	0	0	1	1	1	1	Ribosomal	protein	L18e/L15
PUA	PF01472.15	gi|297527611|ref|YP_003669635.1|	-	0.018	14.7	0.1	0.029	14.1	0.1	1.4	1	0	0	1	1	1	0	PUA	domain
PSK_trans_fac	PF07704.6	gi|297527611|ref|YP_003669635.1|	-	0.087	13.5	0.2	0.14	12.8	0.1	1.3	1	0	0	1	1	1	0	Rv0623-like	transcription	factor
RNA_pol_A_bac	PF01000.21	gi|297527612|ref|YP_003669636.1|	-	3.1e-29	101.3	0.0	7.7e-29	100.1	0.0	1.7	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/RpoA	insert	domain
RNA_pol_L	PF01193.19	gi|297527612|ref|YP_003669636.1|	-	1.5e-14	52.8	0.0	1.8e-14	52.5	0.0	1.1	1	0	0	1	1	1	1	RNA	polymerase	Rpb3/Rpb11	dimerisation	domain
Fer4_16	PF13484.1	gi|297527612|ref|YP_003669636.1|	-	1.4e-07	32.1	5.8	0.0062	17.2	0.8	2.6	2	1	1	3	3	3	3	4Fe-4S	double	cluster	binding	domain
Fer4	PF00037.22	gi|297527612|ref|YP_003669636.1|	-	2.1e-07	30.2	14.3	0.00052	19.5	1.9	3.3	2	1	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_7	PF12838.2	gi|297527612|ref|YP_003669636.1|	-	3.4e-07	30.5	9.0	0.0037	17.6	1.2	2.3	1	1	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_10	PF13237.1	gi|297527612|ref|YP_003669636.1|	-	7.3e-07	28.8	8.0	1.4e-06	27.9	5.6	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_9	PF13187.1	gi|297527612|ref|YP_003669636.1|	-	3.6e-06	27.1	9.9	1.2e-05	25.4	7.0	1.8	1	1	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_8	PF13183.1	gi|297527612|ref|YP_003669636.1|	-	3.7e-06	26.8	2.0	0.069	13.1	0.1	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_2	PF12797.2	gi|297527612|ref|YP_003669636.1|	-	6.2e-06	25.8	11.4	0.00036	20.2	1.8	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_6	PF12837.2	gi|297527612|ref|YP_003669636.1|	-	7.5e-06	25.5	16.7	0.00032	20.4	1.4	2.6	3	0	0	3	3	3	2	4Fe-4S	binding	domain
Fer4_18	PF13746.1	gi|297527612|ref|YP_003669636.1|	-	9.8e-05	22.7	5.0	0.017	15.5	0.1	2.3	2	0	0	2	2	2	2	4Fe-4S	dicluster	domain
Fer4_21	PF14697.1	gi|297527612|ref|YP_003669636.1|	-	0.00013	21.7	9.4	0.00025	20.8	6.5	1.5	1	0	0	1	1	1	1	4Fe-4S	dicluster	domain
Fer4_4	PF12800.2	gi|297527612|ref|YP_003669636.1|	-	0.00056	20.0	11.2	0.013	15.7	1.2	2.4	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_3	PF12798.2	gi|297527612|ref|YP_003669636.1|	-	0.0047	17.3	15.0	0.13	12.8	2.3	2.3	2	0	0	2	2	2	2	4Fe-4S	binding	domain
Fer4_17	PF13534.1	gi|297527612|ref|YP_003669636.1|	-	0.0051	17.1	10.7	0.92	9.9	7.5	2.4	1	1	1	2	2	2	1	4Fe-4S	dicluster	domain
Fer4_11	PF13247.1	gi|297527612|ref|YP_003669636.1|	-	0.061	13.2	2.5	0.13	12.1	1.8	1.5	1	0	0	1	1	1	0	4Fe-4S	dicluster	domain
Ribosomal_S11	PF00411.14	gi|297527613|ref|YP_003669637.1|	-	5e-43	145.7	0.1	5.9e-43	145.5	0.1	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S11
S4	PF01479.20	gi|297527614|ref|YP_003669638.1|	-	1.9e-15	56.0	0.1	1.9e-15	56.0	0.1	1.7	2	0	0	2	2	2	1	S4	domain
Ribosomal_S4	PF00163.14	gi|297527614|ref|YP_003669638.1|	-	3.2e-08	33.8	1.8	5.1e-08	33.1	1.3	1.3	1	0	0	1	1	1	1	Ribosomal	protein	S4/S9	N-terminal	domain
FUSC	PF04632.7	gi|297527614|ref|YP_003669638.1|	-	0.19	10.1	1.2	0.23	9.8	0.8	1.1	1	0	0	1	1	1	0	Fusaric	acid	resistance	protein	family
Ribosomal_S13	PF00416.17	gi|297527615|ref|YP_003669639.1|	-	6.2e-33	113.4	0.0	7.4e-33	113.1	0.0	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S13/S18
FbpA	PF05833.6	gi|297527615|ref|YP_003669639.1|	-	0.11	11.0	0.0	0.15	10.6	0.0	1.1	1	0	0	1	1	1	0	Fibronectin-binding	protein	A	N-terminus	(FbpA)
Ribosomal_S10	PF00338.17	gi|297527616|ref|YP_003669640.1|	-	2.1e-29	101.1	0.4	2.4e-29	101.0	0.2	1.0	1	0	0	1	1	1	1	Ribosomal	protein	S10p/S20e
GTP_EFTU	PF00009.22	gi|297527617|ref|YP_003669641.1|	-	8.8e-56	188.3	0.0	1.2e-55	187.8	0.0	1.2	1	0	0	1	1	1	1	Elongation	factor	Tu	GTP	binding	domain
GTP_EFTU_D3	PF03143.12	gi|297527617|ref|YP_003669641.1|	-	2.2e-28	98.3	0.1	8.4e-28	96.4	0.1	2.0	2	0	0	2	2	2	1	Elongation	factor	Tu	C-terminal	domain
GTP_EFTU_D2	PF03144.20	gi|297527617|ref|YP_003669641.1|	-	1.8e-16	60.0	2.8	1.8e-16	60.0	2.0	1.8	2	0	0	2	2	2	1	Elongation	factor	Tu	domain	2
GTP_EFTU_D4	PF14578.1	gi|297527617|ref|YP_003669641.1|	-	6.6e-08	32.0	1.3	1.6e-07	30.8	0.9	1.6	1	0	0	1	1	1	1	Elongation	factor	Tu	domain	4
MMR_HSR1	PF01926.18	gi|297527617|ref|YP_003669641.1|	-	1.1e-05	25.3	0.1	2.9e-05	24.0	0.0	1.7	1	1	0	1	1	1	1	50S	ribosome-binding	GTPase
Miro	PF08477.8	gi|297527617|ref|YP_003669641.1|	-	0.00017	22.0	0.1	0.0013	19.2	0.1	2.2	1	1	0	1	1	1	1	Miro-like	protein
Dynamin_N	PF00350.18	gi|297527617|ref|YP_003669641.1|	-	0.0072	16.1	0.1	1.5	8.6	0.0	2.5	1	1	1	2	2	2	2	Dynamin	family
Septin	PF00735.13	gi|297527617|ref|YP_003669641.1|	-	0.018	14.0	0.0	0.037	13.0	0.0	1.5	1	1	0	1	1	1	0	Septin
PduV-EutP	PF10662.4	gi|297527617|ref|YP_003669641.1|	-	0.13	11.7	0.1	5.6	6.4	0.0	2.3	2	0	0	2	2	2	0	Ethanolamine	utilisation	-	propanediol	utilisation
Ribosomal_S7	PF00177.16	gi|297527618|ref|YP_003669642.1|	-	3.4e-45	153.2	0.1	4.1e-45	152.9	0.1	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S7p/S5e
DNase-RNase	PF02577.9	gi|297527619|ref|YP_003669643.1|	-	4.5e-07	29.1	0.1	6.5e-07	28.6	0.1	1.2	1	0	0	1	1	1	1	Bifunctional	nuclease
Phage_cap_P2	PF05125.7	gi|297527619|ref|YP_003669643.1|	-	0.07	12.0	0.1	0.1	11.4	0.1	1.3	1	1	0	1	1	1	0	Phage	major	capsid	protein,	P2	family
Ribosom_S12_S23	PF00164.20	gi|297527620|ref|YP_003669644.1|	-	8.2e-40	135.0	0.3	9.8e-40	134.7	0.2	1.1	1	0	0	1	1	1	1	Ribosomal	protein	S12/S23
KH_5	PF13184.1	gi|297527621|ref|YP_003669645.1|	-	1.2e-14	53.8	1.6	2.1e-13	49.8	0.1	2.5	2	1	1	3	3	3	1	NusA-like	KH	domain
KH_2	PF07650.12	gi|297527621|ref|YP_003669645.1|	-	6e-13	48.1	3.8	6.6e-08	32.0	0.0	2.1	1	1	1	2	2	2	2	KH	domain
KH_4	PF13083.1	gi|297527621|ref|YP_003669645.1|	-	1.3e-06	27.9	0.2	0.0036	16.9	0.0	2.2	2	0	0	2	2	2	2	KH	domain
KH_1	PF00013.24	gi|297527621|ref|YP_003669645.1|	-	3.5e-06	26.5	0.2	0.029	14.0	0.0	2.6	3	0	0	3	3	3	2	KH	domain
DUF3239	PF11580.3	gi|297527621|ref|YP_003669645.1|	-	0.14	12.1	0.0	0.21	11.6	0.0	1.3	1	0	0	1	1	1	0	Protein	of	unknown	function	(DUF3239)
Ribosomal_L7Ae	PF01248.21	gi|297527622|ref|YP_003669646.1|	-	8.7e-23	79.6	0.0	9.9e-23	79.4	0.0	1.0	1	0	0	1	1	1	1	Ribosomal	protein	L7Ae/L30e/S12e/Gadd45	family
RNA_pol_Rpb1_5	PF04998.12	gi|297527623|ref|YP_003669647.1|	-	4.2e-53	180.4	1.0	5.7e-53	179.9	0.7	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	5
RNA_pol_Rpb1_1	PF04997.7	gi|297527624|ref|YP_003669648.1|	-	5.2e-90	302.1	0.0	1.7e-89	300.4	0.0	1.7	1	1	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	1
RNA_pol_Rpb1_2	PF00623.15	gi|297527624|ref|YP_003669648.1|	-	4.4e-71	238.1	0.0	7.7e-71	237.3	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	2
RNA_pol_Rpb1_3	PF04983.13	gi|297527624|ref|YP_003669648.1|	-	1.6e-37	128.6	0.0	5.4e-37	126.9	0.0	1.8	2	0	0	2	2	2	1	RNA	polymerase	Rpb1,	domain	3
RNA_pol_Rpb1_4	PF05000.12	gi|297527624|ref|YP_003669648.1|	-	2.2e-28	98.1	0.0	4.1e-28	97.2	0.0	1.4	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	4
RNA_pol_Rpb1_5	PF04998.12	gi|297527624|ref|YP_003669648.1|	-	2.5e-28	99.1	0.0	4e-28	98.4	0.0	1.3	1	0	0	1	1	1	1	RNA	polymerase	Rpb1,	domain	5
Zn-ribbon_8	PF09723.5	gi|297527624|ref|YP_003669648.1|	-	0.16	11.9	1.6	5	7.1	0.0	3.0	3	0	0	3	3	3	0	Zinc	ribbon	domain
UPF0547	PF10571.4	gi|297527624|ref|YP_003669648.1|	-	0.21	11.3	3.4	0.27	10.9	0.1	2.4	2	0	0	2	2	2	0	Uncharacterised	protein	family	UPF0547
zf-ribbon_3	PF13248.1	gi|297527624|ref|YP_003669648.1|	-	0.72	9.1	7.5	1.6	8.0	0.2	3.2	3	0	0	3	3	3	0	zinc-ribbon	domain
Zn_Tnp_IS1595	PF12760.2	gi|297527624|ref|YP_003669648.1|	-	1	9.2	6.2	2	8.2	0.2	2.6	2	0	0	2	2	2	0	Transposase	zinc-ribbon	domain
Lar_restr_allev	PF14354.1	gi|297527624|ref|YP_003669648.1|	-	3.7	7.9	5.0	16	5.9	0.0	2.7	2	1	0	2	2	2	0	Restriction	alleviation	protein	Lar
RNA_pol_Rpb2_6	PF00562.23	gi|297527625|ref|YP_003669649.1|	-	3.2e-130	434.3	0.0	4.5e-130	433.8	0.0	1.2	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	6
RNA_pol_Rpb2_1	PF04563.10	gi|297527625|ref|YP_003669649.1|	-	1.1e-47	161.6	0.1	1.5e-47	161.1	0.0	1.2	1	0	0	1	1	1	1	RNA	polymerase	beta	subunit
RNA_pol_Rpb2_2	PF04561.9	gi|297527625|ref|YP_003669649.1|	-	2.5e-29	102.0	0.7	1.1e-28	99.9	0.5	2.0	1	1	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	2
RNA_pol_Rpb2_7	PF04560.15	gi|297527625|ref|YP_003669649.1|	-	2.2e-28	98.3	0.0	4.7e-28	97.2	0.0	1.6	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	7
RNA_pol_Rpb2_3	PF04565.11	gi|297527625|ref|YP_003669649.1|	-	1.5e-27	95.1	0.0	3e-27	94.1	0.0	1.6	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	3
RNA_pol_Rpb2_4	PF04566.8	gi|297527625|ref|YP_003669649.1|	-	9.6e-22	76.5	3.5	1.1e-21	76.4	0.7	2.3	2	0	0	2	2	2	1	RNA	polymerase	Rpb2,	domain	4
RNA_pol_Rpb2_5	PF04567.12	gi|297527625|ref|YP_003669649.1|	-	3.7e-14	52.4	1.2	8.7e-14	51.2	0.9	1.7	1	0	0	1	1	1	1	RNA	polymerase	Rpb2,	domain	5
RNA_pol_Rpb2_45	PF10385.4	gi|297527625|ref|YP_003669649.1|	-	0.064	13.0	0.2	0.36	10.6	0.1	2.4	2	0	0	2	2	2	0	RNA	polymerase	beta	subunit	external	1	domain
DUF1014	PF06244.7	gi|297527625|ref|YP_003669649.1|	-	0.067	13.3	0.1	11	6.3	0.0	2.6	2	0	0	2	2	2	0	Protein	of	unknown	function	(DUF1014)
RNA_pol_Rpb5_C	PF01191.14	gi|297527626|ref|YP_003669650.1|	-	1.7e-32	110.8	0.1	1.9e-32	110.6	0.1	1.0	1	0	0	1	1	1	1	RNA	polymerase	Rpb5,	C-terminal	domain
HAD_2	PF13419.1	gi|297527627|ref|YP_003669651.1|	-	2.5e-21	76.6	0.0	3e-21	76.4	0.0	1.1	1	0	0	1	1	1	1	Haloacid	dehalogenase-like	hydrolase
Hydrolase	PF00702.21	gi|297527627|ref|YP_003669651.1|	-	3.3e-11	44.0	0.0	1.3e-09	38.8	0.0	2.1	1	1	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_like	PF13242.1	gi|297527627|ref|YP_003669651.1|	-	1.4e-10	40.6	0.0	2.6e-10	39.8	0.0	1.5	1	0	0	1	1	1	1	HAD-hyrolase-like
HAD	PF12710.2	gi|297527627|ref|YP_003669651.1|	-	5.2e-09	36.5	0.0	6.9e-09	36.1	0.0	1.2	1	0	0	1	1	1	1	haloacid	dehalogenase-like	hydrolase
Hydrolase_6	PF13344.1	gi|297527627|ref|YP_003669651.1|	-	0.00018	21.3	0.0	0.2	11.5	0.0	2.8	3	0	0	3	3	3	2	Haloacid	dehalogenase-like	hydrolase
Hydrolase_3	PF08282.7	gi|297527627|ref|YP_003669651.1|	-	0.00019	21.1	0.0	2.2	7.7	0.0	3.1	3	0	0	3	3	3	2	haloacid	dehalogenase-like	hydrolase
Pox_VLTF3	PF04947.9	gi|297527627|ref|YP_003669651.1|	-	0.042	13.3	0.8	0.19	11.2	0.5	1.9	1	1	0	1	1	1	0	Poxvirus	Late	Transcription	Factor	VLTF3	like